id	chrl	l5	l3	chrh	h5	h3	stl	sth	paired.Flag	PD9773a	PD9773c	brass1.presence.summary	brass2_chr_from	brass2_strand_from	brass2_loc_from_min	brass2_loc_from_max	brass2_microhomology	brass2_nontemplated_insertion	brass2_chr_to	brass2_strand_to	brass2_loc_to_min	brass2_loc_to_max	brass2_score	distance.between.breakpoints	CN_a	CN_c	CN.presence.regions	val.verdict	val.platform	consensus.regions	CONFIDENCE	color	TIMING
1	1	34540363	34540361	1	41705430	41705432	+	-	8	-	-	(--)	1	-	34540363	34540361	GT	null	1	+	41705430	41705432	97	7165067	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
5	1	45959769	45960102	1	52216301	52216761	-	-	8	0	5	(-c)	1	-	45959941	0	null	null	1	+	52216663	0	95	6256722	0	0	NA	no.cn.change	copy.number.visual.inspection	neither?	LOW	yellow	NA
8	1	49404942	49405356	1	63709462	63709872	+	+	1	2	6	(ac)	1	+	49405065	0	null	null	1	-	63709571	0	94	14304506	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
12	1	56954579	56955033	1	62273391	62273875	-	+	4	1	4	(ac)	1	-	56954926	0	null	C	1	-	62273486	0	99	5318560	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	yellow	LATE
17	1	68060979	68061397	1	74172038	74172489	-	+	4	0	4	(-c)	1	-	68061270	68061269	A	null	1	-	74172141	74172140	100	6110871	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
19	1	158709449	158709799	1	185146657	185147034	-	-	8	0	6	(-c)	1	-	158709684	0	null	null	1	+	185146916	0	95	26437232	0	0	NA	no.cn.change	copy.number.visual.inspection	neither?	LOW	yellow	NA
21	1	168890607	168890971	1	169353734	169354003	+	+	1	6	11	(ac)	1	+	168890709	0	null	TA	1	-	169353831	0	99	463122	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
26	1	226553339	226553774	15	78547315	78547713	+	+	32	1	6	(ac)	1	+	226553433	226553435	CT	null	15	-	78547451	78547449	80	NA	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
35	2	242037177	242037576	11	134939255	134939641	-	+	32	0	4	(-c)	2	-	242037476	0	null	C	11	-	134939394	0	64	NA	0	0	NA	no.cn.change	copy.number.visual.inspection	neither?	LOW	yellow	NA
36	2	242916977	242917434	16	88576755	88577269	+	+	32	0	5	(-c)	2	+	242917130	242917131	G	null	16	-	88576932	88576931	95	NA	0	0	NA	no.cn.change	copy.number.visual.inspection	neither?	LOW	yellow	NA
39	3	58365683	58366018	3	60124707	60125049	-	+	4	0	8	(-c)	3	-	58365924	58365922	TG	null	3	-	60124811	60124809	99	1758887	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	yellow	LATE
54	6	42669532	42669793	6	42680171	42680538	-	-	8	4	13	(ac)	6	-	42669705	42669697	GCCCAGCC	null	6	+	42680447	42680455	93	10742	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
65	6	119638501	119638892	6	119785728	119786140	+	-	2	1	5	(ac)	6	+	119638586	119638592	CTGTCT	null	6	+	119786040	119786046	94	147454	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
68	8	37890793	37891157	8	37893989	37894465	-	-	8	0	4	(-c)	8	-	37891061	37891060	T	null	8	+	37894343	37894344	97	3282	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
71	8	42828541	42828953	8	42829765	42830132	+	+	1	0	5	(-c)	8	+	42828634	42828637	TGA	null	8	-	42829875	42829872	75	1241	0	0	NA	no.cn.change	copy.number.visual.inspection	neither?	LOW	yellow	NA
73	8	105271677	105272126	8	105282538	105282993	-	-	8	1	6	(ac)	8	-	105272025	105272023	TC	null	8	+	105282824	105282826	93	10799	0	0	NA	no.cn.change	copy.number.visual.inspection	neither?	LOW	yellow	NA
74	8	107071732	107072140	13	87660143	87660550	+	-	32	1	8	(ac)	8	+	107071858	0	null	C	13	+	87660418	0	100	NA	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
76	8	130850393	130850778	8	130859817	130860302	+	+	1	4	3	(ac)	8	+	130850501	130850503	AC	null	8	-	130859929	130859927	99	9428	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
79	11	78721891	78722238	11	78732154	78732638	+	+	1	0	6	(-c)	11	+	78721993	0	null	null	11	-	78732261	0	98	10268	0	0	NA	no.cn.change	copy.number.visual.inspection	neither?	LOW	yellow	NA
80	11	86740318	86740775	11	87023188	87023611	+	-	2	1	5	(ac)	11	+	86740491	86740492	T	null	11	+	87023431	87023432	99	282940	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
87	14	19399909	19400346	22	33254450	33254850	+	+	32	2	3	(ac)	14	+	19400031	19400033	CT	null	22	-	33254550	33254548	95	NA	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
94	19	38210779	38211169	19	38468431	38468736	+	-	2	0	5	(-c)	19	+	38210873	38210874	T	null	19	+	38468640	38468641	99	257767	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
97	22	28831935	28832197	22	28843261	28843558	-	-	8	6	16	(ac)	22	-	28832104	28832101	CAT	null	22	+	28843463	28843466	100	11359	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY