id	chrl	l5	l3	chrh	h5	h3	stl	sth	paired.Flag	PD9776a	PD9776c	brass1.presence.summary	brass2_chr_from	brass2_strand_from	brass2_loc_from_min	brass2_loc_from_max	brass2_microhomology	brass2_nontemplated_insertion	brass2_chr_to	brass2_strand_to	brass2_loc_to_min	brass2_loc_to_max	brass2_score	distance.between.breakpoints	A_CN	C_CN	CN.presence.regions		val.approach	concensus.regions	confidence	color	TIMING
2	1	2848583	2848922	1	2850883	2851242	+	-	2	5	6	(ac)	1	+	2848676	0	null	TT	1	+	2851140	0	85	2464	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
3	1	6307917	6308169	1	35909659	35910023	-	-	8	14	4	(ac)	1	-	6308072	6308069	TGC	null	1	+	35909916	35909919	99	29601844	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
4	1	6328687	6328970	1	35930678	35931138	+	+	1	7	2	(ac)	1	+	6328789	6328792	GCT	null	1	-	35930786	35930783	100	29601997	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
5	1	7433984	7434299	1	7471455	7471861	-	+	4	5	7	(ac)	1	-	7434202	7434201	C	null	1	-	7471562	7471561	100	37360	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
6	1	8379654	8380043	1	48134542	48134834	+	-	2	7	14	(ac)	1	+	8379772	0	null	null	1	+	48134725	0	100	39754953	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
7	1	10241652	10241948	1	10422702	10423088	-	+	4	6	4	(ac)	1	-	10241837	0	null	null	1	-	10422804	0	98	180967	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
9	1	11717693	11718058	1	11718662	11719118	-	+	4	4	6	(ac)	1	-	11717943	11717941	GG	null	1	-	11718760	11718758	75	817	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
10	1	15625557	15625837	1	15632716	15633089	+	-	2	9	7	(ac)	1	+	15625647	15625649	AT	null	1	+	15632985	15632987	91	7338	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
11	1	21456178	21456556	17	53575883	53576266	-	-	32	6	5	(ac)	1	-	21456462	21456458	CCTG	null	17	+	53576166	53576170	91	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
12	1	25119758	25120169	5	141392642	141393040	-	-	32	8	2	(ac)	1	-	25120058	0	null	null	5	+	141392897	0	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
13	1	25128901	25129165	5	141393095	141393481	+	+	32	7	10	(ac)	1	+	25129007	0	null	null	5	-	141393188	0	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
14	1	25402506	25402868	1	25405240	25405615	-	+	4	5	6	(ac)	1	-	25402778	25402773	TTAGT	null	1	-	25405354	25405349	95	2576	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
15	1	27100927	27101197	1	27109005	27109289	-	+	4	14	5	(ac)	1	-	27101089	27101087	AA	null	1	-	27109109	27109107	100	8020	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
17	1	27969677	27969966	1	27977385	27977735	-	+	4	5	8	(ac)	1	-	27969868	27969867	T	null	1	-	27977482	27977481	97	7614	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
19	1	31156689	31157024	1	31157223	31157497	+	-	2	3	5	(ac)	1	+	31156826	31156828	CT	null	1	+	31157379	31157381	83	553	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
21	1	31766774	31767130	1	31774895	31775326	-	+	4	5	6	(ac)	1	-	31767006	31767005	T	null	1	-	31774995	31774994	98	7989	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
23	1	33317738	33318102	1	33334012	33334319	-	+	4	5	5	(ac)	1	-	33318009	33318005	AAAA	null	1	-	33334124	33334120	100	16115	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
25	1	33378303	33378602	16	59351125	59351468	+	-	32	6	13	(ac)	1	+	33378420	0	null	GTG	16	+	59351375	0	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
27	1	34304093	34304425	1	34309531	34309990	-	+	4	4	6	(ac)	1	-	34304293	0	null	null	1	-	34309641	0	100	5348	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
28	1	37292211	37292623	1	37302688	37303057	-	+	4	7	9	(ac)	1	-	37292510	37292509	C	null	1	-	37302781	37302780	99	10271	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
30	1	37300517	37300956	11	77089970	77090300	-	-	32	10	6	(ac)	1	-	37300854	0	null	null	11	+	77090201	0	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
29	1	37300994	37301436	11	78079990	78080269	+	+	32	13	12	(ac)	1	+	37301086	37301087	C	null	11	-	78080091	78080090	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
31	1	47834038	47834410	14	52236323	52236699	-	-	32	4	6	(ac)	1	-	47834310	0	null	TTATAA	14	+	52236582	0	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
32	1	47846708	47847029	14	52246896	52247246	+	+	32	10	13	(ac)	1	+	47846815	47846816	C	null	14	-	52246991	52246990	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
33	1	48107004	48107336	1	48120092	48120437	-	+	4	4	13	(ac)	1	-	48107241	0	null	AAAAATGG	1	-	48120187	0	94	12946	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
34	1	50166522	50166892	1	50169184	50169440	-	+	4	8	5	(ac)	1	-	50166800	0	null	TTTAATAAAAA	1	-	50169282	0	89	2482	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
35	1	50692368	50692647	1	50698732	50699069	-	+	4	6	10	(ac)	1	-	50692541	50692537	TAGC	null	1	-	50698821	50698817	100	6280	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
37	1	51695843	51696203	1	51698414	51698775	-	+	4	6	9	(ac)	1	-	51696110	51696109	A	null	1	-	51698507	51698506	100	2397	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
38	1	52170277	52170616	1	52172574	52172915	-	+	4	12	6	(ac)	1	-	52170528	52170526	CA	null	1	-	52172671	52172669	99	2143	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
40	1	52306104	52306439	1	52316672	52316927	-	+	4	7	12	(ac)	1	-	52306338	52306337	C	null	1	-	52316763	52316762	100	10425	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
41	1	52554690	52554962	1	52573022	52573412	-	+	4	6	6	(ac)	1	-	52554866	52554864	AA	null	1	-	52573128	52573126	84	18262	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
42	1	52901322	52901754	1	56987679	56988123	-	+	4	1	7	(ac)	1	-	52901653	52901649	ATTT	null	1	-	56987832	56987828	99	4086179	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
43	1	53450182	53450467	1	53458811	53459064	-	+	4	7	2	(ac)	1	-	53450368	53450366	CA	null	1	-	53458914	53458912	100	8546	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
44	1	54023258	54023539	1	54026854	54027165	-	+	4	7	12	(ac)	1	-	54023436	54023429	ATATATT	null	1	-	54026944	54026937	95	3508	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
45	1	54035058	54035433	1	54099394	54099686	+	-	2	3	8	(ac)	1	+	54035165	0	null	AGTTTGATAT	1	+	54099580	0	72	64415	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
46	1	54156438	54156736	1	54168090	54168433	-	+	4	8	12	(ac)	1	-	54156644	54156643	C	null	1	-	54168190	54168189	95	11546	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
47	1	57580663	57580933	1	57758875	57759227	+	-	2	8	8	(ac)	1	+	57580757	0	null	CATTCT	1	+	57759124	0	98	178367	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
48	1	57981428	57981732	1	57983931	57984277	-	+	4	12	16	(ac)	1	-	57981619	57981618	G	null	1	-	57984049	57984048	98	2430	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
49	1	60205949	60206317	1	62471755	62472113	-	+	4	4	12	(ac)	1	-	60206205	60206202	GCC	null	1	-	62471858	62471855	100	2265653	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
50	1	61692376	61692696	1	61700405	61700746	-	+	4	6	5	(ac)	1	-	61692590	0	null	null	1	-	61700515	0	97	7925	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
51	1	61971993	61972441	1	64784918	64785311	-	+	4	8	7	(ac)	1	-	61972335	0	null	null	1	-	64785042	0	96	2812707	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
52	1	62598815	62599157	1	62603305	62603630	+	-	2	9	15	(ac)	1	+	62598905	62598907	GT	null	1	+	62603531	62603533	96	4626	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
53	1	64164930	64165286	1	64174945	64175317	-	+	4	6	7	(ac)	1	-	64165163	64165160	CAA	null	1	-	64175040	64175037	91	9877	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
55	1	65813085	65813431	1	65828664	65829070	-	+	4	7	6	(ac)	1	-	65813334	65813330	GTTT	null	1	-	65828796	65828792	97	15462	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
57	1	67428759	67429120	1	67431268	67431611	-	+	4	7	3	(ac)	1	-	67429014	67429012	TA	null	1	-	67431375	67431373	98	2361	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
58	1	68339807	68340184	1	68344327	68344676	-	+	4	10	5	(ac)	1	-	68340106	0	null	GATTGTCCCTACTCCTGCTGA	1	-	68344424	0	98	4318	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
60	1	73675693	73676044	1	73720966	73721231	+	-	2	5	13	(ac)	1	+	73675793	73675794	A	null	1	+	73721139	73721140	94	45346	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
61	1	75179221	75179604	1	75181085	75181387	+	-	2	4	9	(ac)	1	+	75179345	0	null	GCTCTAAG	1	+	75181273	0	100	1928	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
63	1	78166780	78167087	1	79261698	79262143	-	+	4	4	14	(ac)	1	-	78166982	78166979	TCT	null	1	-	79261790	79261787	97	1094808	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
64	1	78231639	78232087	1	80521106	80521520	-	+	4	0	6	(-c)	1	-	78231968	78231967	T	null	1	-	80521249	80521248	65	2289281	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
65	1	78434763	78435094	1	78442636	78443021	-	+	4	8	3	(ac)	1	-	78434999	0	null	AT	1	-	78442728	0	100	7729	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
66	1	78577445	78577827	1	78582761	78583225	-	+	4	3	10	(ac)	1	-	78577695	78577694	A	null	1	-	78582854	78582853	100	5159	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
67	1	79070758	79071059	1	79077231	79077611	-	+	4	5	6	(ac)	1	-	79070964	0	null	null	1	-	79077327	0	96	6363	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
68	1	79951488	79951780	1	79961315	79961461	-	+	4	5	7	(ac)	1	-	79951688	79951686	AA	null	1	-	79961413	79961411	100	9725	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
69	1	80665391	80665785	1	80683171	80683626	-	+	4	2	6	(ac)	1	-	80665655	80665651	TTTT	null	1	-	80683267	80683263	97	17612	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
70	1	83414812	83415165	1	83418282	83418603	-	+	4	10	8	(ac)	1	-	83415070	83415068	AG	null	1	-	83418372	83418370	100	3302	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
73	1	86291831	86292297	1	86524932	86525288	+	-	2	6	8	(ac)	1	+	86291970	0	null	A	1	+	86525158	0	97	233188	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
74	1	86661053	86661372	1	86664320	86664697	-	+	4	11	7	(ac)	1	-	86661274	86661273	A	null	1	-	86664420	86664419	96	3146	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
76	1	87800214	87800662	1	87813563	87813890	-	+	4	9	4	(ac)	1	-	87800567	87800562	GAGGA	null	1	-	87813661	87813656	94	13094	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
77	1	87856477	87856817	1	87864877	87865250	-	+	4	11	4	(ac)	1	-	87856724	87856722	CT	null	1	-	87864988	87864986	99	8264	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
79	1	92355532	92355927	1	92360698	92361042	-	+	4	3	5	(ac)	1	-	92355829	92355826	TCA	null	1	-	92360817	92360814	94	4988	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
81	1	92439612	92440095	18	9330282	9330574	-	+	32	9	3	(ac)	1	-	92440000	0	null	null	18	-	9330392	0	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
80	1	92440047	92440560	18	9328750	9329039	+	-	32	2	7	(ac)	1	+	92440141	92440145	TCAT	null	18	+	9328920	9328924	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
84	1	94845302	94845706	1	94853739	94854015	-	+	4	5	0	(a-)	1	-	94845610	0	null	null	1	-	94853846	0	98	8236	0	0	no cn change seen	no.cn.change	copy.number.visual.inspection	a	MEDIUM	red	NA
85	1	95932239	95932583	1	95939890	95940276	-	+	4	6	8	(ac)	1	-	95932496	95932492	ATAG	null	1	-	95940008	95940004	100	7512	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
86	1	96303346	96303657	1	96304758	96305158	-	+	4	12	7	(ac)	1	-	96303562	96303558	ACAA	null	1	-	96304854	96304850	85	1292	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
87	1	97575925	97576259	1	97580362	97580751	-	+	4	8	9	(ac)	1	-	97576170	97576168	AA	null	1	-	97580466	97580464	91	4296	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
88	1	98405614	98405921	1	98409624	98409994	-	+	4	0	8	(-c)	1	-	98405827	98405826	A	null	1	-	98409780	98409779	100	3953	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
89	1	99635009	99635304	1	99637152	99637443	-	+	4	5	11	(ac)	1	-	99635203	99635200	TTA	null	1	-	99637250	99637247	95	2047	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
92	1	111450777	111451143	1	111456823	111457204	-	+	4	9	10	(ac)	1	-	111451035	111451033	AT	null	1	-	111456913	111456911	100	5878	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
93	1	112543739	112544161	8	138450756	138451045	+	+	32	6	6	(ac)	1	+	112543832	0	null	CT	8	-	138450858	0	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
95	1	153252307	153252606	12	105958118	105958407	-	+	32	14	10	(ac)	1	-	153252510	153252509	T	null	12	-	105958218	105958217	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
96	1	153281644	153282112	12	105957492	105957933	+	-	32	4	3	(ac)	1	+	153281735	0	null	AGAATGGAATGGAATGGAATGGAACGGAACGGAACGGAATGGAATGGATTGGAATGGAATGGAATGGAATGGAATGGAATGCAAAGCAATGGAATCAACTCGATTGCAATGGAATGGAATGGAATGGAAAGGAAT	12	+	105957838	0	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
97	1	154214392	154214754	1	154215172	154215485	-	+	4	4	10	(ac)	1	-	154214657	154214656	T	null	1	-	154215272	154215271	68	615	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
98	1	155936615	155936957	1	155957705	155958041	-	+	4	0	7	(-c)	1	-	155936860	0	null	null	1	-	155957878	0	100	21018	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
99	1	156544260	156544649	5	65432046	65432546	-	-	32	7	4	(ac)	1	-	156544548	0	null	TGTCA	5	+	65432447	0	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
101	1	156911232	156911589	1	156916839	156917103	-	+	4	23	18	(ac)	1	-	156911499	156911496	CCC	null	1	-	156916936	156916933	100	5437	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
102	1	156912591	156912952	5	65432511	65432996	+	+	32	4	5	(ac)	1	+	156912750	156912751	G	null	5	-	65432600	65432599	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
103	1	157240981	157241304	1	157244690	157245039	-	+	4	9	14	(ac)	1	-	157241206	157241203	CAT	null	1	-	157244800	157244797	100	3594	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
104	1	159297097	159297497	1	159300746	159301181	-	+	4	1	5	(ac)	1	-	159297368	159297364	TTTT	null	1	-	159300838	159300834	100	3470	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
105	1	160903454	160903855	1	160908118	160908554	-	+	4	4	7	(ac)	1	-	160903709	0	null	null	1	-	160908225	0	93	4516	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
106	1	163269727	163270050	1	163273076	163273336	-	+	4	17	15	(ac)	1	-	163269959	163269957	CA	null	1	-	163273182	163273180	100	3223	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
107	1	164472208	164472516	1	164475742	164476018	-	+	4	4	10	(ac)	1	-	164472425	164472422	GAG	null	1	-	164475860	164475857	100	3435	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
110	1	172382300	172382669	1	172437990	172438248	-	+	4	14	11	(ac)	1	-	172382571	172382570	A	null	1	-	172438080	172438079	100	55509	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
113	1	178516770	178517146	1	178525576	178525961	-	+	4	8	5	(ac)	1	-	178517054	178517052	TG	null	1	-	178525681	178525679	99	8627	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
114	1	179075614	179075950	1	179088311	179088568	-	+	4	17	20	(ac)	1	-	179075851	179075849	CA	null	1	-	179088403	179088401	98	12552	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
115	1	180401700	180402015	1	180408385	180408703	-	+	4	14	11	(ac)	1	-	180401917	180401916	G	null	1	-	180408485	180408484	100	6568	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
117	1	184243987	184244397	1	184254382	184254809	-	+	4	6	8	(ac)	1	-	184244292	184244291	T	null	1	-	184254525	184254524	95	10233	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
118	1	186438685	186439015	21	36358722	36359107	+	-	32	2	7	(ac)	1	+	186438803	186438806	AAG	null	21	+	36358979	36358982	94	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
119	1	196335975	196336373	1	196341771	196342103	-	+	4	4	8	(ac)	1	-	196336249	196336247	AA	null	1	-	196341867	196341865	100	5618	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
120	1	198999242	198999655	1	199002771	199003186	-	+	4	5	5	(ac)	1	-	198999532	0	null	null	1	-	199002872	0	100	3340	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
121	1	205811152	205811580	1	205812359	205812662	-	+	4	3	6	(ac)	1	-	205811477	205811476	G	null	1	-	205812462	205812461	90	985	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
122	1	205811667	205811977	1	205824103	205824441	-	+	4	6	5	(ac)	1	-	205811878	205811877	T	null	1	-	205824206	205824205	98	12328	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
123	1	207424213	207424523	1	207452941	207453280	-	+	4	8	13	(ac)	1	-	207424407	0	null	null	1	-	207453035	0	100	28628	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
124	1	209947698	209948011	1	209977372	209977713	-	+	4	15	6	(ac)	1	-	209947916	209947914	TT	null	1	-	209977493	209977491	99	29577	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
125	1	211424229	211424608	1	211443809	211444135	-	+	4	10	7	(ac)	1	-	211424495	211424493	AG	null	1	-	211443917	211443915	90	19422	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
126	1	211717841	211718171	1	211738353	211738759	-	+	4	5	11	(ac)	1	-	211718064	211718063	A	null	1	-	211738461	211738460	100	20397	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
127	1	213916052	213916371	1	213927966	213928323	-	+	4	10	4	(ac)	1	-	213916273	213916271	AA	null	1	-	213928064	213928062	84	11791	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
128	1	220320837	220321182	1	220322286	220322578	-	+	4	10	8	(ac)	1	-	220321087	220321085	CA	null	1	-	220322379	220322377	90	1292	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
129	1	222520523	222520792	1	222523159	222523453	-	+	4	10	6	(ac)	1	-	222520697	222520692	TTTGA	null	1	-	222523255	222523250	99	2558	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
131	1	226153323	226153720	1	226182267	226182648	+	+	1	11	6	(ac)	1	+	226153409	226153412	TTC	null	1	-	226182377	226182374	97	28968	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
132	1	227223873	227224213	10	9069395	9069785	-	+	32	9	8	(ac)	1	-	227224082	227224080	AA	null	10	-	9069498	9069496	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
133	1	227229103	227229412	10	9068830	9069205	+	-	32	8	12	(ac)	1	+	227229210	0	null	null	10	+	9069113	0	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
135	1	227979384	227979851	1	227987345	227987746	-	+	4	4	5	(ac)	1	-	227979733	227979732	A	null	1	-	227987445	227987444	91	7712	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
136	1	228020831	228021190	1	228025585	228025903	-	+	4	5	8	(ac)	1	-	228021095	228021094	G	null	1	-	228025680	228025679	99	4585	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
137	1	229465797	229466203	1	229470181	229470524	-	+	4	10	6	(ac)	1	-	229466100	229466096	TCAT	null	1	-	229470271	229470267	70	4171	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
138	1	229818134	229818450	1	229821868	229822158	-	+	4	6	2	(ac)	1	-	229818353	229818352	T	null	1	-	229821991	229821990	95	3638	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
140	1	235983517	235983835	1	235988489	235988913	-	+	4	3	7	(ac)	1	-	235983734	235983732	TG	null	1	-	235988607	235988605	99	4873	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
141	1	242530215	242530495	1	242536791	242537209	-	+	4	7	5	(ac)	1	-	242530399	242530398	T	null	1	-	242536897	242536896	95	6498	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
142	1	243849498	243849827	1	243937654	243937954	+	-	2	9	9	(ac)	1	+	243849591	243849592	A	null	1	+	243937849	243937850	98	88258	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
144	2	4334619	4334974	2	4335931	4336257	+	-	2	5	5	(ac)	2	+	4334731	4334733	CA	null	2	+	4336145	4336147	85	1414	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
145	2	6843549	6843807	2	6849091	6849425	-	+	4	6	12	(ac)	2	-	6843712	6843710	GT	null	2	-	6849185	6849183	100	5473	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
146	2	7367791	7368110	2	7371438	7371750	+	-	2	7	4	(ac)	2	+	7367894	0	null	null	2	+	7371659	0	93	3765	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
147	2	8708483	8708909	2	8713043	8713376	-	+	4	2	4	(ac)	2	-	8708782	8708781	T	null	2	-	8713179	8713178	94	4397	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
149	2	11066095	11066487	2	11074436	11074757	-	+	4	19	21	(ac)	2	-	11066398	11066396	GC	null	2	-	11074535	11074533	100	8137	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
150	2	12052640	12052928	18	14910105	14910532	-	+	32	6	6	(ac)	2	-	12052808	12052805	ACA	null	18	-	14910198	14910195	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
151	2	12437611	12437951	3	26502760	26503086	-	-	32	10	6	(ac)	2	-	12437844	0	null	null	3	+	26502974	0	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
153	2	12674536	12674792	8	115421125	115421400	-	-	32	11	16	(ac)	2	-	12674701	0	null	null	8	+	115421306	0	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
154	2	12681192	12681467	8	115428923	115429272	+	+	32	10	5	(ac)	2	+	12681289	12681290	A	null	8	-	115429037	115429036	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
156	2	13622094	13622420	12	84897398	84897748	-	-	32	10	16	(ac)	2	-	13622313	13622312	A	null	12	+	84897653	84897654	85	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
157	2	13622682	13623005	2	13624848	13625215	+	-	2	6	7	(ac)	2	+	13622781	13622783	CT	null	2	+	13625119	13625121	100	2338	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
158	2	13626684	13626915	12	84897913	84898265	+	+	32	13	23	(ac)	2	+	13626777	13626779	CC	null	12	-	84898008	84898006	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
159	2	14221160	14221592	5	44096680	44097111	+	-	32	1	5	(ac)	2	+	14221260	14221264	TTTT	null	5	+	44096992	44096996	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
160	2	15449942	15450294	2	15452453	15452791	-	+	4	10	4	(ac)	2	-	15450200	15450199	G	null	2	-	15452557	15452556	99	2357	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
161	2	16046014	16046259	2	16055585	16055896	-	+	4	8	6	(ac)	2	-	16046165	16046163	GT	null	2	-	16055692	16055690	99	9527	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
162	2	16579642	16580043	2	16586327	16586671	-	+	4	3	6	(ac)	2	-	16579910	0	null	null	2	-	16586424	0	100	6514	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
164	2	20383595	20383965	7	147323694	147323973	-	+	32	10	7	(ac)	2	-	20383866	20383863	CCA	null	7	-	147323793	147323790	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
163	2	20384080	20384439	7	147323616	147323944	+	-	32	8	10	(ac)	2	+	20384170	20384173	CCT	null	7	+	147323839	147323842	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
166	2	21123341	21123615	7	43342357	43342665	-	+	32	9	15	(ac)	2	-	21123521	21123517	TCTC	null	7	-	43342447	43342443	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
167	2	21130304	21130639	9	91294810	91295262	+	-	32	3	7	(ac)	2	+	21130420	21130421	T	null	9	+	91295141	91295142	95	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
168	2	21329294	21329681	2	21336865	21337146	-	+	4	7	7	(ac)	2	-	21329585	21329583	AA	null	2	-	21336970	21336968	98	7385	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
169	2	22531934	22532289	2	22534499	22534842	-	+	4	9	10	(ac)	2	-	22532168	22532165	AAG	null	2	-	22534597	22534594	99	2429	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
171	2	24301999	24302304	21	35994662	35995093	-	-	32	7	6	(ac)	2	-	24302195	0	null	C	21	+	35994966	0	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
170	2	24302570	24302833	21	35998684	35999037	+	+	32	8	7	(ac)	2	+	24302679	0	null	null	21	-	35998777	0	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
172	2	24565503	24565746	2	24585532	24585855	+	-	2	6	3	(ac)	2	+	24565609	24565614	AAAGC	null	2	+	24585748	24585753	99	20139	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
174	2	26279010	26279299	2	26297304	26297696	-	+	4	3	6	(ac)	2	-	26279169	0	null	TTGAACGCAGAAGGCAGAGGTTGCAGTGAGCCGAGATCACGCCAC	2	-	26297343	0	100	18174	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
175	2	26893052	26893346	X	33903875	33904161	+	-	32	5	3	(ac)	2	+	26893155	26893157	TG	null	X	+	33904054	33904056	80	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
176	2	27512418	27512633	2	27520063	27520415	-	+	4	6	6	(ac)	2	-	27512522	27512517	GCTTA	null	2	-	27520188	27520183	98	7666	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
177	2	32565009	32565395	18	34385087	34385515	+	+	32	9	6	(ac)	2	+	32565119	0	null	ATT	18	-	34385195	0	97	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
178	2	32565564	32565836	18	34385015	34385332	-	-	32	11	8	(ac)	2	-	32565743	32565742	A	null	18	+	34385225	34385226	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
179	2	33079939	33080204	2	33084265	33084557	-	+	4	4	6	(ac)	2	-	33080117	33080112	CTCCT	null	2	-	33084367	33084362	99	4250	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
181	2	33645834	33646147	2	225078506	225078796	-	+	4	7	16	(ac)	2	-	33646056	33646055	C	null	2	-	225078597	225078596	99	191432541	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
180	2	33646348	33646683	2	225078414	225078722	+	-	2	9	20	(ac)	2	+	33646439	33646443	TTTG	null	2	+	225078627	225078631	99	191432188	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
182	2	34128211	34128512	2	34129451	34129837	-	+	4	8	8	(ac)	2	-	34128402	0	null	null	2	-	34129546	0	85	1144	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
183	2	34630890	34631245	2	34636501	34636819	+	-	2	7	6	(ac)	2	+	34630993	34630998	ATTTT	null	2	+	34636720	34636725	99	5727	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
184	2	34928973	34929227	12	89144761	89145023	+	+	32	14	12	(ac)	2	+	34929072	34929073	A	null	12	-	89144852	89144851	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
185	2	34990399	34990741	15	75719755	75720060	+	+	32	14	19	(ac)	2	+	34990492	34990496	TTTG	null	15	-	75719849	75719845	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
186	2	37102762	37103015	17	5016792	5017135	-	+	32	7	8	(ac)	2	-	37102926	37102924	CA	null	17	-	5016902	5016900	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
187	2	42187249	42187606	2	42526016	42526336	-	+	4	8	8	(ac)	2	-	42187513	42187510	GTA	null	2	-	42526107	42526104	100	338594	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
188	2	42681456	42681777	2	42683226	42683512	-	+	4	10	6	(ac)	2	-	42681681	42681679	GA	null	2	-	42683322	42683320	99	1641	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
189	2	42794393	42794716	8	122157519	122157939	-	-	32	5	6	(ac)	2	-	42794607	0	null	C	8	+	122157824	0	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
190	2	42803100	42803446	2	42804911	42805372	-	+	4	7	7	(ac)	2	-	42803347	42803343	ACTT	null	2	-	42805028	42805024	100	1681	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
192	2	43828393	43828712	2	43831853	43832121	-	+	4	7	5	(ac)	2	-	43828614	0	null	null	2	-	43831955	0	100	3341	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
193	2	47985710	47986068	2	47995088	47995456	-	+	4	7	6	(ac)	2	-	47985966	47985965	G	null	2	-	47995199	47995198	85	9233	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
194	2	48744605	48744975	2	48746441	48746780	-	+	4	4	5	(ac)	2	-	48744868	48744867	G	null	2	-	48746543	48746542	94	1675	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
195	2	48918356	48918706	2	48922520	48922826	-	+	4	9	13	(ac)	2	-	48918607	0	null	null	2	-	48922614	0	99	4007	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
196	2	61730562	61730946	2	61733212	61733568	-	+	4	5	2	(ac)	2	-	61730847	61730844	TGG	null	2	-	61733306	61733303	97	2459	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
198	2	63166740	63167223	2	63174301	63174588	-	+	4	4	6	(ac)	2	-	63167074	63167072	TG	null	2	-	63174397	63174395	85	7323	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
199	2	65880642	65880974	2	65891371	65891663	-	+	4	4	5	(ac)	2	-	65880878	65880876	TC	null	2	-	65891462	65891460	100	10584	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
200	2	66487345	66487600	2	66497564	66497793	-	+	4	5	4	(ac)	2	-	66487506	66487505	T	null	2	-	66497658	66497657	100	10152	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
202	2	74008672	74009084	2	74243778	74244092	-	+	4	5	6	(ac)	2	-	74008975	74008973	GG	null	2	-	74243888	74243886	99	234913	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
203	2	76166075	76166400	2	76166759	76167149	+	-	2	8	10	(ac)	2	+	76166180	76166185	TCTTT	null	2	+	76167038	76167043	75	858	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
206	2	98982081	98982418	2	98984444	98984641	-	+	4	9	7	(ac)	2	-	98982321	98982319	TG	null	2	-	98984534	98984532	98	2213	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
207	2	99011922	99012213	9	33032597	33033080	+	+	32	5	4	(ac)	2	+	99012011	99012015	ATCT	null	9	-	33032722	33032718	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
208	2	99016441	99016807	15	71457821	71458142	-	+	32	7	2	(ac)	2	-	99016668	99016667	A	null	15	-	71457929	71457928	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
211	2	99025612	99026131	15	71456433	71456750	-	-	32	1	4	(ac)	2	-	99026005	0	null	A	15	+	71456643	0	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
212	2	99030107	99030334	9	33032185	33032629	+	-	32	6	5	(ac)	2	+	99030220	99030222	TT	null	9	+	33032539	33032541	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
213	2	101272562	101272982	20	11195013	11195426	+	+	32	5	4	(ac)	2	+	101272679	0	null	null	20	-	11195148	0	95	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
215	2	101272503	101272823	4	44223427	44223827	-	-	32	11	10	(ac)	2	-	101272725	101272723	AA	null	4	+	44223726	44223728	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
216	2	111500631	111500950	X	7039611	7040031	+	-	32	3	5	(ac)	2	+	111500723	0	null	null	X	+	7039896	0	69	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
217	2	111740591	111740966	2	111744756	111745132	-	+	4	4	6	(ac)	2	-	111740860	111740856	AGGC	null	2	-	111744848	111744844	98	3988	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
218	2	119552540	119552912	2	119615895	119616173	-	+	4	8	7	(ac)	2	-	119552812	119552811	G	null	2	-	119615991	119615990	99	63179	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
220	2	119803897	119804288	2	119818981	119819509	+	-	2	3	8	(ac)	2	+	119804056	0	null	null	2	+	119819414	0	100	15358	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
221	2	122281577	122282000	2	122288276	122288779	-	+	4	1	5	(ac)	2	-	122281897	122281894	TCC	null	2	-	122288444	122288441	93	6547	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
222	2	123560704	123561030	2	123561650	123562003	-	+	4	8	7	(ac)	2	-	123560931	0	null	null	2	-	123561745	0	90	814	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
223	2	124057680	124057960	2	124064357	124064671	-	+	4	7	6	(ac)	2	-	124057863	124057861	AT	null	2	-	124064448	124064446	100	6585	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
224	2	132320748	132321134	2	132325117	132325404	-	+	4	5	7	(ac)	2	-	132321038	132321036	GC	null	2	-	132325210	132325208	99	4172	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
225	2	132652738	132653092	2	132661552	132661959	-	+	4	2	8	(ac)	2	-	132652976	132652974	GT	null	2	-	132661655	132661653	84	8679	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
226	2	143146007	143146241	2	143154405	143154799	-	+	4	5	15	(ac)	2	-	143146150	0	null	null	2	-	143154524	0	100	8374	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
227	2	147398899	147399238	2	147412647	147412993	-	+	4	7	4	(ac)	2	-	147399139	0	null	null	2	-	147412748	0	98	13609	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
228	2	148152484	148152806	2	148183554	148183830	+	-	2	7	15	(ac)	2	+	148152582	148152586	ATTT	null	2	+	148183721	148183725	98	31139	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
229	2	153944680	153945011	2	153948907	153949205	-	+	4	12	10	(ac)	2	-	153944911	153944907	AAGA	null	2	-	153949020	153949016	99	4109	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
230	2	155917858	155918251	2	155928098	155928426	-	+	4	6	5	(ac)	2	-	155918133	155918132	A	null	2	-	155928213	155928212	100	10080	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
231	2	166301235	166301583	2	166304627	166304909	-	+	4	9	11	(ac)	2	-	166301489	166301488	A	null	2	-	166304719	166304718	95	3230	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
232	2	168008821	168009189	2	168009834	168010125	-	-	8	4	5	(ac)	2	-	168009090	168009089	T	null	2	+	168010014	168010015	95	924	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
233	2	168009304	168009681	2	168010160	168010605	+	+	1	5	7	(ac)	2	+	168009396	168009398	TG	null	2	-	168010309	168010307	89	913	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
234	2	168348852	168349225	2	168350555	168350842	-	+	4	6	10	(ac)	2	-	168349121	168349120	G	null	2	-	168350656	168350655	65	1535	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
235	2	168530989	168531222	2	168535112	168535362	-	+	4	8	15	(ac)	2	-	168531126	168531123	TTT	null	2	-	168535211	168535208	63	4085	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
236	2	170600944	170601311	2	179300653	179301029	+	-	2	1	5	(ac)	2	+	170601063	170601067	TCTG	null	2	+	179300937	179300941	89	8699874	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
237	2	172903521	172903851	2	172923778	172924094	-	+	4	10	18	(ac)	2	-	172903748	172903747	T	null	2	-	172923876	172923875	100	20128	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
238	2	173327199	173327476	2	173336508	173336807	-	+	4	14	5	(ac)	2	-	173327383	173327382	T	null	2	-	173336610	173336609	94	9227	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
239	2	174620467	174620792	2	174628538	174628842	-	+	4	11	10	(ac)	2	-	174620700	174620698	TG	null	2	-	174628629	174628627	99	7929	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
240	2	177831206	177831636	10	132309199	132309553	+	-	32	5	1	(ac)	2	+	177831297	177831299	CT	null	10	+	132309449	132309451	65	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
242	2	181181308	181181651	2	181185147	181185501	-	+	4	3	5	(ac)	2	-	181181532	181181531	C	null	2	-	181185251	181185250	99	3719	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
243	2	191650996	191651309	2	191653909	191654188	-	+	4	8	7	(ac)	2	-	191651214	191651212	GC	null	2	-	191654020	191654018	93	2806	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
244	2	191851396	191851602	2	191856180	191856492	-	+	4	8	17	(ac)	2	-	191851513	0	null	null	2	-	191856277	0	99	4764	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
245	2	192675694	192676019	2	192680679	192681006	-	+	4	3	8	(ac)	2	-	192675901	192675899	AT	null	2	-	192680806	192680804	100	4905	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
246	2	193878736	193879143	2	193879968	193880324	-	+	4	2	6	(ac)	2	-	193879046	193879044	TC	null	2	-	193880093	193880091	90	1047	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
247	2	194657010	194657233	2	194688088	194688423	+	-	2	10	16	(ac)	2	+	194657104	194657107	CTT	null	2	+	194688323	194688326	99	31219	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
248	2	204349064	204349453	2	204353990	204354365	-	+	4	6	6	(ac)	2	-	204349353	204349352	C	null	2	-	204354092	204354091	100	4739	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
249	2	222373231	222373492	2	222376835	222377108	-	+	4	9	8	(ac)	2	-	222373390	222373387	CAT	null	2	-	222376937	222376934	100	3547	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
250	2	222582624	222582893	6	143155722	143156079	-	+	32	9	8	(ac)	2	-	222582794	222582790	AGTT	null	6	-	143155825	143155821	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
252	2	231553006	231553348	2	231553862	231554151	+	-	2	11	15	(ac)	2	+	231553099	231553101	GC	null	2	+	231554058	231554060	70	959	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
254	2	235522254	235522654	2	235527289	235527676	-	+	4	2	5	(ac)	2	-	235522535	235522531	CTCT	null	2	-	235527382	235527378	99	4847	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
255	2	238626123	238626406	2	238631913	238632238	-	+	4	20	18	(ac)	2	-	238626315	238626312	ACC	null	2	-	238632009	238632006	98	5694	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
256	3	221762	222129	3	226821	227141	-	+	4	10	5	(ac)	3	-	222024	0	null	null	3	-	226915	0	100	4891	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
257	3	3305384	3305666	3	3316886	3317131	-	+	4	14	10	(ac)	3	-	3305574	3305573	T	null	3	-	3316980	3316979	100	11406	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
259	3	5154514	5154867	3	5170904	5171174	-	+	4	5	8	(ac)	3	-	5154764	5154759	CTACT	null	3	-	5170990	5170985	100	16226	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
260	3	6231565	6231869	3	6237341	6237740	-	+	4	1	7	(ac)	3	-	6231777	6231773	AATA	null	3	-	6237455	6237451	96	5678	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
262	3	7987050	7987471	8	81696224	81696547	-	-	32	12	8	(ac)	3	-	7987359	0	null	null	8	+	81696455	0	92	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
261	3	7987520	7987891	8	81702423	81702734	+	+	32	17	9	(ac)	3	+	7987628	7987629	C	null	8	-	81702523	81702522	97	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
263	3	8479086	8479327	3	8484299	8484611	-	+	4	12	7	(ac)	3	-	8479230	8479226	ATAA	null	3	-	8484394	8484390	100	5164	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
264	3	8972554	8972866	6	54687633	54688092	-	-	32	4	6	(ac)	3	-	8972719	8972717	TT	null	6	+	54687992	54687994	75	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
265	3	8979900	8980315	6	54688069	54688529	+	+	32	4	4	(ac)	3	+	8980035	0	null	null	6	-	54688171	0	90	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
267	3	10608201	10608589	3	10616940	10617272	-	+	4	4	13	(ac)	3	-	10608482	10608480	CC	null	3	-	10617032	10617030	94	8550	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
268	3	10877074	10877408	3	10883627	10883958	-	+	4	7	4	(ac)	3	-	10877313	10877310	GCC	null	3	-	10883724	10883721	98	6411	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
269	3	12571675	12571992	3	12578242	12578591	-	+	4	8	9	(ac)	3	-	12571900	12571896	AGTA	null	3	-	12578338	12578334	92	6438	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
270	3	15022202	15022575	8	97237789	97238095	-	-	32	6	10	(ac)	3	-	15022482	15022481	C	null	8	+	97238002	97238003	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
271	3	15042667	15043017	8	97240656	97241003	+	+	32	15	18	(ac)	3	+	15042755	15042758	TAA	null	8	-	97240751	97240748	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
272	3	16085975	16086366	15	31521330	31521747	-	+	32	3	4	(ac)	3	-	16086260	16086258	AT	null	15	-	31521440	31521438	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
273	3	16089518	16089837	3	19023339	19023585	+	+	1	6	4	(ac)	3	+	16089609	16089611	CC	null	3	-	19023436	19023434	97	2933827	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
274	3	16290598	16290955	3	16292832	16293157	-	+	4	7	8	(ac)	3	-	16290861	0	null	TATTGTA	3	-	16292927	0	98	2066	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
275	3	18871920	18872281	3	18877836	18878205	-	+	4	8	4	(ac)	3	-	18872171	0	null	null	3	-	18877927	0	100	5756	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
276	3	23805414	23805762	3	23813930	23814233	-	+	4	8	4	(ac)	3	-	23805665	23805662	GGT	null	3	-	23814020	23814017	79	8355	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
277	3	26182814	26183189	3	26187310	26187538	-	+	4	2	9	(ac)	3	-	26183087	26183086	T	null	3	-	26187405	26187404	99	4318	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
278	3	27445471	27445843	3	36316730	36317065	+	-	2	2	12	(ac)	3	+	27445568	27445569	A	null	3	+	36316970	36316971	99	8871402	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
279	3	28613221	28613600	3	28616167	28616547	-	+	4	8	5	(ac)	3	-	28613495	0	null	TTGGCAGAGGATAGTTTTTAAACCTCTCATC	3	-	28616259	0	100	2764	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
280	3	39457711	39458046	3	39462044	39462490	-	+	4	3	6	(ac)	3	-	39457931	39457930	T	null	3	-	39462149	39462148	99	4218	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
281	3	45198355	45198682	3	45200408	45200850	-	+	4	8	11	(ac)	3	-	45198586	45198584	CA	null	3	-	45200520	45200518	89	1934	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
282	3	45201585	45201884	15	47987383	47987649	+	+	32	12	10	(ac)	3	+	45201688	45201690	AG	null	15	-	47987475	47987473	97	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
283	3	52722243	52722604	3	73527310	73527701	+	+	1	2	6	(ac)	3	+	52722343	52722345	CT	null	3	-	73527404	73527402	99	20805061	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
284	3	52724634	52724992	3	52727720	52728093	-	+	4	9	8	(ac)	3	-	52724899	52724898	G	null	3	-	52727834	52727833	98	2935	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	grey	EARLY
285	3	58821406	58821784	15	47982971	47983344	-	-	32	6	6	(ac)	3	-	58821683	58821682	G	null	15	+	47983245	47983246	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
286	3	60421740	60422035	3	60423272	60423708	-	+	4	4	5	(ac)	3	-	60421935	0	null	null	3	-	60423366	0	75	1431	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
287	3	60470855	60471268	3	60471808	60472249	+	+	1	3	5	(ac)	3	+	60470959	60470963	CTGT	null	3	-	60471903	60471899	94	944	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
288	3	60470734	60471094	3	60471367	60471821	-	-	8	6	3	(ac)	3	-	60470980	0	null	TAGGA	3	+	60471716	0	95	736	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
289	3	64963653	64964036	3	67129113	67129492	-	+	4	7	6	(ac)	3	-	64963946	64963943	GAT	null	3	-	67129206	67129203	65	2165260	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
292	3	72888234	72888557	3	72888892	72889253	+	-	2	7	3	(ac)	3	+	72888338	0	null	A	3	+	72889158	0	82	820	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
294	3	74677896	74678221	3	74679636	74680058	-	+	4	3	9	(ac)	3	-	74678087	74678086	A	null	3	-	74679751	74679750	100	1664	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
295	3	75449812	75450166	3	122835528	122835984	-	+	4	8	6	(ac)	3	-	75450056	0	null	G	3	-	122835664	0	82	47385608	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
296	3	75453066	75453402	3	122835127	122835496	+	-	2	4	9	(ac)	3	+	75453170	75453174	AGAT	null	3	+	122835400	122835404	99	47382230	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
297	3	76011381	76011760	3	76013325	76013551	-	-	8	7	7	(ac)	3	-	76011668	76011665	TGA	null	3	+	76013442	76013445	95	1774	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
298	3	76016153	76016594	3	76016266	76016741	+	+	1	5	4	(ac)	3	+	76016306	76016308	AC	null	3	-	76016363	76016361	95	57	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
300	3	88587225	88587734	20	25013858	25014251	-	-	32	2	8	(ac)	3	-	88587643	88587642	A	null	20	+	25014133	25014134	93	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
301	3	95134195	95134504	7	130287612	130287999	+	-	32	8	3	(ac)	3	+	95134307	95134308	C	null	7	+	130287904	130287905	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
302	3	95134128	95134407	7	130287787	130288224	-	+	32	6	10	(ac)	3	-	95134314	95134312	TT	null	7	-	130287881	130287879	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
303	3	95162196	95162487	3	95167382	95167727	-	+	4	3	7	(ac)	3	-	95162383	0	null	null	3	-	95167525	0	100	5142	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
304	3	96276940	96277307	3	96288078	96288534	-	+	4	2	5	(ac)	3	-	96277160	0	null	null	3	-	96288182	0	95	11022	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
305	3	102550470	102550793	3	102553255	102553578	-	+	4	4	5	(ac)	3	-	102550677	102550673	TTGT	null	3	-	102553352	102553348	95	2675	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
306	3	102775436	102775717	3	102781744	102782015	-	+	4	8	7	(ac)	3	-	102775597	102775595	TG	null	3	-	102781839	102781837	94	6242	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
307	3	107482803	107483092	3	107484824	107485121	-	+	4	4	9	(ac)	3	-	107482986	107482985	C	null	3	-	107484919	107484918	99	1933	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
308	3	114052414	114052722	3	114081670	114081937	-	+	4	9	7	(ac)	3	-	114052627	0	null	null	3	-	114081762	0	100	29135	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
309	3	116548897	116549256	3	116550780	116551116	-	+	4	4	6	(ac)	3	-	116549158	0	null	CAAAGTACAGCTCTT	3	-	116550915	0	100	1757	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
310	3	118343335	118343713	3	118347831	118348277	-	+	4	5	1	(ac)	3	-	118343594	118343590	TCAG	null	3	-	118347952	118347948	93	4358	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
311	3	118704053	118704443	3	118710157	118710521	-	+	4	11	9	(ac)	3	-	118704308	118704305	AGC	null	3	-	118710253	118710250	99	5945	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
312	3	119813867	119814164	3	119820828	119821121	-	+	4	4	7	(ac)	3	-	119814056	119814052	CACA	null	3	-	119820923	119820919	99	6867	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
313	3	120900760	120901098	3	157746504	157746769	-	+	4	8	9	(ac)	3	-	120900998	120900996	TA	null	3	-	157746597	157746595	94	36845599	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
314	3	121699864	121700107	3	121712747	121713059	-	+	4	7	6	(ac)	3	-	121700013	121700012	G	null	3	-	121712840	121712839	94	12827	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
315	3	123487099	123487401	3	123488985	123489278	+	-	2	8	15	(ac)	3	+	123487190	123487191	T	null	3	+	123489163	123489164	99	1973	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
317	3	133945120	133945566	3	146739820	146740194	-	+	4	0	5	(-c)	3	-	133945456	133945453	AAT	null	3	-	146739984	146739981	95	12794528	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
318	3	133979074	133979484	3	133986451	133986744	-	+	4	6	4	(ac)	3	-	133979343	133979341	AA	null	3	-	133986544	133986542	99	7201	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
320	3	135822296	135822599	3	135832980	135833381	-	+	4	4	10	(ac)	3	-	135822501	0	null	null	3	-	135833071	0	98	10570	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
324	3	137581758	137582037	15	85230832	85231312	-	-	32	8	7	(ac)	3	-	137581933	137581932	C	null	15	+	85231219	85231220	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
323	3	137584556	137584906	15	85231268	85231759	+	+	32	2	6	(ac)	3	+	137584624	0	null	AAAAAAAGAGGCAGGTCTCGATCAAGTCTAAAGCTTTAAACCTGGAGAA	15	-	85231365	0	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
325	3	139567472	139567804	11	87886558	87886993	-	+	32	10	11	(ac)	3	-	139567707	139567705	AG	null	11	-	87886653	87886651	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
326	3	139573744	139574046	11	87886104	87886532	+	-	32	10	13	(ac)	3	+	139573837	139573840	ACT	null	11	+	87886439	87886442	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
327	3	141446366	141446720	3	141460210	141460597	-	+	4	7	7	(ac)	3	-	141446620	141446618	TT	null	3	-	141460341	141460339	98	13721	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
328	3	141718472	141718824	3	141739268	141739512	-	+	4	10	6	(ac)	3	-	141718725	141718724	G	null	3	-	141739368	141739367	69	20643	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
329	3	143565715	143566018	3	143566792	143567065	-	+	4	17	17	(ac)	3	-	143565929	0	null	null	3	-	143566888	0	90	959	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
330	3	146982020	146982365	3	146984360	146984773	-	+	4	7	9	(ac)	3	-	146982245	0	null	null	3	-	146984454	0	100	2209	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
331	3	148453883	148454170	3	148458996	148459239	-	+	4	3	10	(ac)	3	-	148454079	148454076	GGC	null	3	-	148459106	148459103	100	5027	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
332	3	150170349	150170502	11	86637823	86637959	-	+	32	12	12	(ac)	3	-	150170404	150170403	T	null	11	-	86637916	86637915	74	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
334	3	153271434	153271681	5	113004943	113005202	-	+	32	11	6	(ac)	3	-	153271595	153271586	CATTCTTGC	null	5	-	113005035	113005026	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
335	3	153283642	153284018	5	112996576	112996854	+	-	32	5	9	(ac)	3	+	153283742	153283748	GTGTCT	null	5	+	112996764	112996770	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
336	3	156663610	156663963	7	66586515	66586972	-	+	32	5	2	(ac)	3	-	156663872	156663871	T	null	7	-	66586670	66586669	89	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
337	3	156663571	156664038	7	72155203	72155709	-	-	32	4	1	(ac)	3	-	156663872	156663871	T	null	7	+	72155615	72155616	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
338	3	156673400	156673772	6	162238362	162238698	-	+	32	8	7	(ac)	3	-	156673659	156673657	CA	null	6	-	162238457	162238455	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
340	3	156673872	156674232	6	134483739	134484026	+	-	32	4	7	(ac)	3	+	156673962	156673966	AAAA	null	6	+	134483933	134483937	95	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
339	3	156674416	156674731	7	66586045	66586501	+	-	32	8	9	(ac)	3	+	156674513	156674514	C	null	7	+	66586376	66586377	89	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
342	3	158380080	158380488	3	158387826	158388209	-	+	4	3	4	(ac)	3	-	158380389	0	null	null	3	-	158387924	0	95	7535	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
343	3	161515217	161515563	3	176657402	176657776	+	-	2	14	10	(ac)	3	+	161515310	161515311	A	null	3	+	176657681	176657682	99	15142371	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
345	3	168007102	168007412	3	168010165	168010532	+	-	2	7	10	(ac)	3	+	168007198	168007200	CT	null	3	+	168010427	168010429	100	3229	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
346	3	168892067	168892385	3	168901334	168901702	-	+	4	7	2	(ac)	3	-	168892285	0	null	TATAA	3	-	168901460	0	82	9175	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
347	3	171730625	171731083	3	171747033	171747343	+	-	2	6	6	(ac)	3	+	171730715	171730716	C	null	3	+	171747210	171747211	99	16495	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
348	3	172079543	172079992	3	172083905	172084386	-	-	8	5	4	(ac)	3	-	172079833	172079830	AAA	null	3	+	172084275	172084278	79	4442	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
349	3	172084348	172084805	3	172085725	172086106	+	+	1	4	2	(ac)	3	+	172084446	172084448	AT	null	3	-	172085877	172085875	75	1431	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
350	3	179776371	179776713	3	179778452	179778736	-	+	4	6	4	(ac)	3	-	179776608	0	null	null	3	-	179778585	0	95	1977	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
351	3	181457988	181458242	3	181458793	181459082	+	-	2	5	6	(ac)	3	+	181458098	0	null	null	3	+	181458971	0	89	873	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
352	3	182334057	182334451	7	91664575	91664951	-	-	32	5	5	(ac)	3	-	182334326	182334322	CAAC	null	7	+	91664839	91664843	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
353	3	182336166	182336518	7	91670665	91671094	+	+	32	1	6	(ac)	3	+	182336277	0	null	null	7	-	91670841	0	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
354	3	182858510	182858829	3	182858969	182859355	+	-	2	5	9	(ac)	3	+	182858601	0	null	TCT	3	+	182859251	0	89	650	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
356	3	182936031	182936417	3	184052738	184053175	+	-	2	3	5	(ac)	3	+	182936125	182936126	G	null	3	+	184053053	184053054	99	1116928	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
357	3	184842086	184842451	3	184842952	184843330	-	-	8	0	8	(-c)	3	-	184842359	184842356	AAG	null	3	+	184843150	184843153	83	791	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
358	3	184843578	184843846	3	184845451	184845700	+	+	1	6	11	(ac)	3	+	184843694	184843697	GAC	null	3	-	184845548	184845545	98	1854	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
359	3	186207495	186207774	X	18511951	18512323	-	+	32	13	11	(ac)	3	-	186207683	186207680	TAG	null	X	-	18512046	18512043	93	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
360	3	186215846	186216200	X	18511286	18511625	+	-	32	9	10	(ac)	3	+	186215950	186215953	TTA	null	X	+	18511523	18511526	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
362	3	188781304	188781598	3	188787615	188787952	-	+	4	6	7	(ac)	3	-	188781474	188781472	TT	null	3	-	188787706	188787704	99	6232	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
363	3	188933015	188933324	3	188938673	188939034	-	+	4	6	6	(ac)	3	-	188933234	188933232	AC	null	3	-	188938773	188938771	100	5539	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
364	3	190207103	190207469	3	190216083	190216351	-	+	4	15	8	(ac)	3	-	190207375	190207374	A	null	3	-	190216178	190216177	95	8803	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
365	3	190445070	190445345	3	190447792	190448085	-	+	4	6	6	(ac)	3	-	190445249	190445247	CT	null	3	-	190447897	190447895	100	2648	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
366	3	190545965	190546260	3	190548004	190548236	-	+	4	13	11	(ac)	3	-	190546163	190546161	TC	null	3	-	190548103	190548101	100	1940	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
367	3	191407675	191407959	3	191411309	191411644	-	+	4	9	4	(ac)	3	-	191407848	0	null	T	3	-	191411407	0	99	3559	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
370	3	196707430	196707934	3	196713205	196713577	-	+	4	1	4	(ac)	3	-	196707765	196707763	AT	null	3	-	196713298	196713296	100	5533	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
371	3	196896570	196896989	3	196897109	196897522	-	-	8	0	8	(-c)	3	-	196896879	196896878	G	null	3	+	196897423	196897424	95	544	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
372	3	196898333	196898647	3	196910079	196910364	+	+	1	0	6	(-c)	3	+	196898445	196898447	AA	null	3	-	196910200	196910198	92	11755	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
373	4	150987	151363	4	153518	153833	-	+	4	8	16	(ac)	4	-	151262	151260	AA	null	4	-	153608	153606	85	2346	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
378	4	20125816	20126129	4	20132024	20132385	-	+	4	5	3	(ac)	4	-	20126037	0	null	AGG	4	-	20132130	0	93	6093	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
379	4	44223872	44224295	20	11184729	11185035	+	-	32	12	6	(ac)	4	+	44223954	44223957	AAC	null	20	+	11184904	11184907	92	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
380	4	60128348	60128571	4	60142679	60142921	-	+	4	13	7	(ac)	4	-	60128466	60128464	GT	null	4	-	60142773	60142771	95	14307	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
381	4	61998174	61998577	4	62010936	62011327	-	+	4	3	6	(ac)	4	-	61998445	61998444	A	null	4	-	62011051	62011050	100	12606	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
383	4	68050558	68050947	4	68051090	68051444	-	-	8	6	9	(ac)	4	-	68050838	68050835	AAC	null	4	+	68051351	68051354	94	513	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
384	4	68051681	68051962	4	68061467	68061757	+	+	1	11	6	(ac)	4	+	68051791	68051793	AA	null	4	-	68061560	68061558	94	9769	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
385	4	71468721	71469072	4	74605048	74605297	-	+	4	4	10	(ac)	4	-	71468978	71468977	T	null	4	-	74605142	74605141	98	3136164	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
386	4	74122703	74123044	4	74134464	74134760	-	+	4	14	18	(ac)	4	-	74122945	0	null	ATTGT	4	-	74134567	0	99	11622	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
387	4	76387537	76387932	4	76393755	76394087	-	+	4	5	9	(ac)	4	-	76387825	76387824	A	null	4	-	76393848	76393847	99	6023	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
388	4	78055443	78055703	4	78067247	78067541	-	+	4	7	7	(ac)	4	-	78055613	78055607	ATAGCA	null	4	-	78067339	78067333	79	11726	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
390	4	82821509	82821741	4	82841255	82841666	-	+	4	8	5	(ac)	4	-	82821642	82821641	A	null	4	-	82841351	82841350	99	19709	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
391	4	83278636	83278961	4	83290621	83291033	-	+	4	5	11	(ac)	4	-	83278864	83278862	GA	null	4	-	83290730	83290728	97	11866	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
392	4	88019005	88019479	4	88022506	88022943	-	+	4	0	5	(-c)	4	-	88019310	0	null	GAGG	4	-	88022609	0	99	3299	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
396	4	101497302	101497583	4	101499473	101499799	-	+	4	4	1	(ac)	4	-	101497488	101497487	G	null	4	-	101499576	101499575	96	2088	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
397	4	106601889	106602244	4	106604041	106604350	-	+	4	4	8	(ac)	4	-	106602151	106602150	G	null	4	-	106604155	106604154	94	2004	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
398	4	111701349	111701728	4	111710297	111710721	-	+	4	6	6	(ac)	4	-	111701608	111701606	TA	null	4	-	111710420	111710418	100	8812	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
399	4	111741410	111741852	4	111749560	111750031	-	+	4	4	1	(ac)	4	-	111741738	0	null	AT	4	-	111749788	0	100	8050	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
400	4	112499883	112500275	4	112504774	112505120	-	+	4	3	10	(ac)	4	-	112500163	0	null	null	4	-	112504867	0	100	4704	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
401	4	112676134	112676509	4	112680963	112681224	-	+	4	7	7	(ac)	4	-	112676411	112676408	GAA	null	4	-	112681073	112681070	97	4662	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
402	4	125228677	125228991	6	68354919	68355435	-	+	32	3	4	(ac)	4	-	125228878	125228874	TTGT	null	6	-	68355049	68355045	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
403	4	125231947	125232321	6	68354480	68354941	+	-	32	7	3	(ac)	4	+	125232046	125232049	CTT	null	6	+	68354848	68354851	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
404	4	133527048	133527331	4	133527848	133528165	-	+	4	8	7	(ac)	4	-	133527233	0	null	T	4	-	133527943	0	74	710	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
405	4	137346738	137347052	4	137347258	137347624	+	+	1	9	4	(ac)	4	+	137346829	137346831	TT	null	4	-	137347351	137347349	95	522	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
406	4	140890702	140891054	4	140897990	140898315	-	+	4	5	9	(ac)	4	-	140890939	140890937	AG	null	4	-	140898097	140898095	100	7158	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
407	4	143182674	143183090	4	143188377	143188788	-	+	4	8	3	(ac)	4	-	143182979	143182978	A	null	4	-	143188508	143188507	100	5529	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
409	4	144605085	144605471	16	26678730	26679183	+	+	32	5	5	(ac)	4	+	144605182	144605185	CAC	null	16	-	26678824	26678821	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
410	4	148557551	148558050	4	151155666	151155993	-	+	4	1	4	(ac)	4	-	148557930	148557929	T	null	4	-	151155775	151155774	100	2597845	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
412	4	157725591	157725910	4	157726340	157726754	+	-	2	0	9	(-c)	4	+	157725697	157725705	AAAATCTT	null	4	+	157726654	157726662	90	957	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
413	4	157786846	157787228	4	162989414	162989822	+	-	2	5	5	(ac)	4	+	157786954	157786955	A	null	4	+	162989700	162989701	99	5202746	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
415	4	177492862	177493186	4	177494308	177494610	+	+	1	5	4	(ac)	4	+	177492959	177492961	TT	null	4	-	177494409	177494407	93	1450	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
416	4	185467461	185467764	4	185468086	185468450	+	-	2	5	6	(ac)	4	+	185467567	185467568	G	null	4	+	185468359	185468360	73	792	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
418	4	186544911	186545243	X	141106262	141106678	-	+	32	7	2	(ac)	4	-	186545143	186545142	A	null	X	-	141106370	141106369	90	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
417	4	186545640	186546012	12	94848686	94848927	+	-	32	7	4	(ac)	4	+	186545739	186545741	CA	null	12	+	94848836	94848838	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
422	5	2881526	2881823	5	2886806	2887057	-	+	4	5	10	(ac)	5	-	2881720	2881719	T	null	5	-	2886897	2886896	99	5177	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
423	5	9048555	9049016	6	98562582	98562942	+	+	32	6	5	(ac)	5	+	9048649	0	null	null	6	-	98562707	0	90	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
425	5	16270511	16270867	5	16273932	16274181	-	+	4	7	5	(ac)	5	-	16270770	16270768	TT	null	5	-	16274023	16274021	95	3253	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
426	5	18106783	18107049	5	18110558	18110922	-	+	4	6	5	(ac)	5	-	18106952	18106948	AACC	null	5	-	18110674	18110670	98	3722	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
427	5	29850961	29851341	5	29855218	29855610	-	+	4	3	6	(ac)	5	-	29851247	0	null	null	5	-	29855317	0	100	4070	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
428	5	30198308	30198695	5	30201370	30201774	-	+	4	1	5	(ac)	5	-	30198601	30198595	GGGACT	null	5	-	30201471	30201465	95	2870	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
429	5	32631603	32631997	8	86040613	86040926	-	-	32	6	5	(ac)	5	-	32631893	32631890	ATC	null	8	+	86040810	86040813	94	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
430	5	43892249	43892483	5	43892920	43893249	-	+	4	8	14	(ac)	5	-	43892380	43892377	ATT	null	5	-	43893020	43893017	89	640	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
431	5	44134452	44134843	5	44140568	44140924	-	+	4	6	5	(ac)	5	-	44134745	44134743	TT	null	5	-	44140693	44140691	100	5948	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
433	5	53285079	53285449	8	130095925	130096302	-	+	32	7	11	(ac)	5	-	53285358	53285356	CA	null	8	-	130096025	130096023	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
434	5	53287041	53287387	8	130062266	130062580	+	-	32	4	13	(ac)	5	+	53287159	0	null	null	8	+	130062478	0	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
435	5	55253862	55254124	5	55257287	55257635	-	+	4	8	7	(ac)	5	-	55254029	55254028	C	null	5	-	55257384	55257383	94	3355	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
436	5	55893998	55894314	5	55902498	55902789	+	-	2	10	5	(ac)	5	+	55894093	55894096	AGG	null	5	+	55902681	55902684	98	8588	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
438	5	66731342	66731744	5	66735564	66735906	-	+	4	8	7	(ac)	5	-	66731629	66731628	T	null	5	-	66735657	66735656	95	4028	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
440	5	90540887	90541263	5	90554112	90554413	-	+	4	6	6	(ac)	5	-	90541117	90541113	TGGC	null	5	-	90554209	90554205	99	13092	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
441	5	95733426	95733786	5	95739143	95739399	-	+	4	9	12	(ac)	5	-	95733694	95733691	AAA	null	5	-	95739246	95739243	100	5552	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
442	5	108951052	108951375	5	108953184	108953451	-	+	4	4	7	(ac)	5	-	108951273	0	null	null	5	-	108953276	0	98	2003	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
443	5	112566006	112566165	11	12081406	12081694	-	+	32	8	6	(ac)	5	-	112566049	112566047	TC	null	11	-	12081498	12081496	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
444	5	112582211	112582539	11	12081126	12081618	+	-	32	6	2	(ac)	5	+	112582349	112582353	CAGC	null	11	+	12081523	12081527	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
446	5	134670629	134671083	5	134675838	134676168	-	+	4	10	6	(ac)	5	-	134670974	0	null	null	5	-	134675938	0	100	4964	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
447	5	137762954	137763281	5	137820739	137821033	-	+	4	7	2	(ac)	5	-	137763184	0	null	AAAA	5	-	137820855	0	94	57671	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
448	5	138353912	138354286	5	147928766	147929167	-	+	4	4	3	(ac)	5	-	138354193	138354191	AT	null	5	-	147928856	147928854	100	9574663	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
449	5	138689808	138690186	5	138722300	138722794	-	+	4	4	6	(ac)	5	-	138690093	138690090	AGG	null	5	-	138722417	138722414	97	32324	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
450	5	142015804	142016122	5	142020639	142021038	-	+	4	5	5	(ac)	5	-	142016030	142016028	AA	null	5	-	142020736	142020734	99	4706	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
451	5	142301623	142301962	5	142325798	142326172	-	+	4	6	7	(ac)	5	-	142301866	0	null	TATGTCATGTTAAGTCTG	5	-	142325886	0	99	24020	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
452	5	148609219	148609590	5	148614596	148615020	-	+	4	3	4	(ac)	5	-	148609490	148609488	CT	null	5	-	148614755	148614753	95	5265	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
453	5	149987855	149988191	5	149992449	149992933	-	+	4	0	5	(-c)	5	-	149988037	149988035	CC	null	5	-	149992556	149992554	99	4519	0	0	no cn change seen	no.cn.change	copy.number.visual.inspection	c	MEDIUM	blue	NA
454	5	154178732	154179089	5	154195351	154195755	+	-	2	6	2	(ac)	5	+	154178831	154178836	TTTTA	null	5	+	154195624	154195629	98	16793	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
455	5	164173794	164174007	5	164181424	164181649	-	+	4	8	4	(ac)	5	-	164173917	164173915	AG	null	5	-	164181520	164181518	100	7603	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
458	6	1099073	1099383	11	47041604	47041931	-	+	32	4	8	(ac)	6	-	1099287	1099286	A	null	11	-	47041699	47041698	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
459	6	1115441	1115807	11	47135063	47135409	+	-	32	4	4	(ac)	6	+	1115545	1115546	C	null	11	+	47135300	47135301	95	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
460	6	8116607	8116988	6	8121005	8121508	-	+	4	5	4	(ac)	6	-	8116877	8116873	TGCC	null	6	-	8121097	8121093	98	4220	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
461	6	10566993	10567373	6	10569900	10570359	+	-	2	4	4	(ac)	6	+	10567110	10567111	T	null	6	+	10570198	10570199	98	3088	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
462	6	11332513	11332834	6	11336794	11337235	-	+	4	3	8	(ac)	6	-	11332724	0	null	ATGTAGTGTAGCCTAAATGTACAGTATTTATAAAGTCTACAGTAGTGC	6	-	11336862	0	98	4138	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
463	6	11835594	11835949	6	18103229	18103400	-	-	8	9	5	(ac)	6	-	11835846	0	null	T	6	+	18103286	0	100	6267440	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
464	6	16283972	16284396	6	16288068	16288392	-	+	4	5	6	(ac)	6	-	16284298	16284297	C	null	6	-	16288179	16288178	100	3881	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
465	6	17650348	17650755	6	17755837	17756180	-	+	4	7	3	(ac)	6	-	17650654	17650652	GT	null	6	-	17755933	17755931	93	105279	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
466	6	18704035	18704352	6	18714826	18715177	-	+	4	6	9	(ac)	6	-	18704248	0	null	T	6	-	18714923	0	97	10675	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
467	6	22810143	22810503	6	22820946	22821255	-	+	4	3	10	(ac)	6	-	22810414	22810412	AT	null	6	-	22821037	22821035	99	10623	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
472	6	29259785	29260181	6	29266566	29266923	-	+	4	5	5	(ac)	6	-	29260033	0	null	GTGTGTATATATATATT	6	-	29266652	0	90	6619	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
473	6	29382508	29382860	6	29384228	29384536	-	+	4	9	3	(ac)	6	-	29382746	0	null	null	6	-	29384326	0	88	1580	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
475	6	30900478	30900838	6	30905294	30905593	-	+	4	8	5	(ac)	6	-	30900693	30900691	TT	null	6	-	30905385	30905383	99	4692	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
476	6	31270341	31270704	6	39585925	39586244	+	-	2	9	7	(ac)	6	+	31270481	31270483	TA	null	6	+	39586135	39586137	88	8315654	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
477	6	34267975	34268289	6	34275735	34276013	-	+	4	4	11	(ac)	6	-	34268200	34268198	CA	null	6	-	34275842	34275840	94	7642	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
478	6	39882825	39883225	6	39893306	39893587	+	-	2	5	9	(ac)	6	+	39882922	39882925	CTT	null	6	+	39893488	39893491	99	10566	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
480	6	41670366	41670682	6	41675696	41676082	-	+	4	2	7	(ac)	6	-	41670572	41670571	G	null	6	-	41675797	41675796	99	5225	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
483	6	42396768	42397197	6	42466340	42466665	-	-	8	4	4	(ac)	6	-	42397106	42397102	GGTT	null	6	+	42466568	42466572	100	69462	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
482	6	42397184	42397681	6	42469235	42469545	+	+	1	4	3	(ac)	6	+	42397321	42397324	AAT	null	6	-	42469376	42469373	94	72055	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
484	6	43397303	43397772	6	43405852	43406214	-	+	4	7	8	(ac)	6	-	43397647	43397645	GA	null	6	-	43405967	43405965	100	8320	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
485	6	44125736	44125975	6	44137194	44137516	-	+	4	7	10	(ac)	6	-	44125874	0	null	G	6	-	44137285	0	99	11411	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
486	6	46479347	46479659	6	46490399	46490749	-	+	4	12	9	(ac)	6	-	46479565	46479563	CT	null	6	-	46490503	46490501	88	10938	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
487	6	47560295	47560672	6	47562134	47562583	+	-	2	5	2	(ac)	6	+	47560403	47560408	ACCAA	null	6	+	47562464	47562469	99	2061	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
488	6	53155980	53156329	6	53157240	53157590	+	-	2	9	7	(ac)	6	+	53156081	53156082	G	null	6	+	53157495	53157496	70	1414	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
490	6	69422532	69422948	6	69428816	69429191	-	+	4	1	7	(ac)	6	-	69422849	69422847	TT	null	6	-	69428975	69428973	93	6126	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
491	6	72077736	72077996	6	72089784	72090154	-	+	4	7	10	(ac)	6	-	72077908	72077903	TTTTT	null	6	-	72089887	72089882	100	11979	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
492	6	74074798	74075198	6	74108964	74109306	-	+	4	5	5	(ac)	6	-	74075104	0	null	null	6	-	74109067	0	79	33963	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
493	6	75814048	75814402	6	75822387	75822719	-	+	4	7	12	(ac)	6	-	75814298	75814294	AGTA	null	6	-	75822479	75822475	100	8181	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
494	6	76647532	76647881	6	76651251	76651560	-	+	4	4	9	(ac)	6	-	76647783	76647781	GT	null	6	-	76651349	76651347	100	3566	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
495	6	77702140	77702530	6	77704918	77705227	-	+	4	4	6	(ac)	6	-	77702426	0	null	null	6	-	77705028	0	100	2602	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
496	6	79163301	79163623	6	79166638	79167035	-	+	4	5	9	(ac)	6	-	79163529	79163527	AA	null	6	-	79166743	79166741	99	3214	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
497	6	83157404	83157707	6	83163171	83163528	-	+	4	4	4	(ac)	6	-	83157566	83157564	CA	null	6	-	83163261	83163259	97	5695	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
498	6	84050324	84050745	11	93912255	93912602	-	+	32	4	8	(ac)	6	-	84050647	84050641	ACAGAA	null	11	-	93912375	93912369	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
499	6	87447059	87447434	6	87450370	87450652	-	+	4	4	13	(ac)	6	-	87447339	87447337	TT	null	6	-	87450458	87450456	85	3119	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
500	6	87617224	87617481	18	20109482	20109701	+	-	32	6	7	(ac)	6	+	87617323	87617324	G	null	18	+	20109603	20109604	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
502	6	90964315	90964669	6	90972277	90972734	-	+	4	5	5	(ac)	6	-	90964536	90964535	T	null	6	-	90972391	90972390	97	7855	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
503	6	94024395	94024884	6	94031079	94031448	-	+	4	4	2	(ac)	6	-	94024693	0	null	T	6	-	94031172	0	95	6479	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
504	6	99060408	99060840	6	99082626	99082909	-	+	4	12	7	(ac)	6	-	99060746	99060742	GGCA	null	6	-	99082717	99082713	99	21971	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
505	6	101802286	101802568	6	101820258	101820532	-	+	4	10	9	(ac)	6	-	101802474	0	null	T	6	-	101820352	0	96	17878	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
507	6	116233845	116234202	6	116242718	116243064	-	+	4	3	7	(ac)	6	-	116234095	116234093	CA	null	6	-	116242820	116242818	99	8725	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
508	6	119195402	119195701	6	119201053	119201505	-	+	4	5	7	(ac)	6	-	119195594	119195589	GCTCC	null	6	-	119201145	119201140	100	5551	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
510	6	124456287	124456604	6	124462525	124462919	-	+	4	4	3	(ac)	6	-	124456496	124456494	TG	null	6	-	124462690	124462688	93	6194	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
511	6	125607208	125607547	6	125611644	125612064	-	+	4	9	4	(ac)	6	-	125607446	125607444	AT	null	6	-	125611748	125611746	99	4302	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
512	6	125863946	125864301	6	125930202	125930561	+	-	2	9	8	(ac)	6	+	125864038	0	null	null	6	+	125930461	0	84	66423	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
513	6	130564107	130564477	6	130571552	130571910	-	+	4	6	3	(ac)	6	-	130564369	130564368	T	null	6	-	130571703	130571702	98	7334	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
514	6	132836564	132836946	6	132842159	132842547	-	+	4	8	6	(ac)	6	-	132836853	132836852	T	null	6	-	132842265	132842264	100	5412	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
516	6	134888321	134888674	6	134890827	134891074	-	+	4	6	6	(ac)	6	-	134888579	134888578	A	null	6	-	134890933	134890932	95	2354	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
517	6	135078468	135078803	6	135089047	135089352	-	+	4	11	6	(ac)	6	-	135078709	0	null	ATATTACCTTTTG	6	-	135089142	0	98	10433	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
518	6	137251614	137251919	6	137256373	137256785	-	-	8	3	8	(ac)	6	-	137251815	137251812	ATG	null	6	+	137256686	137256689	93	4871	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
523	6	143046140	143046405	6	143053819	143054089	-	+	4	17	18	(ac)	6	-	143046315	143046310	ACCAT	null	6	-	143053926	143053921	99	7611	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
524	6	154619377	154619695	6	154676513	154676821	-	+	4	12	18	(ac)	6	-	154619598	154619594	GAAA	null	6	-	154676611	154676607	100	57013	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
525	6	157225988	157226328	20	51720734	51721144	+	+	32	7	6	(ac)	6	+	157226097	157226101	TCTT	null	20	-	51720835	51720831	97	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
526	6	157278654	157278983	20	51720286	51720693	-	-	32	13	8	(ac)	6	-	157278890	157278888	GC	null	20	+	51720590	51720592	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
527	6	157318078	157318383	6	157321555	157321847	-	+	4	16	17	(ac)	6	-	157318275	157318271	TTTT	null	6	-	157321644	157321640	98	3369	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
528	6	157409606	157410032	8	123049573	123049882	-	-	32	14	4	(ac)	6	-	157409917	157409916	A	null	8	+	123049785	123049786	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
529	6	157414823	157415161	8	123050014	123050358	+	+	32	8	8	(ac)	6	+	157414909	157414914	TGAGT	null	8	-	123050109	123050104	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
530	6	157937774	157938155	6	158067628	158067898	+	-	2	8	12	(ac)	6	+	157937875	157937877	AA	null	6	+	158067806	158067808	99	129931	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
531	6	170535304	170535736	6	170540418	170540761	-	+	4	8	7	(ac)	6	-	170535639	170535637	AC	null	6	-	170540514	170540512	98	4875	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
533	7	1090677	1091092	10	93173226	93173620	-	-	32	5	3	(ac)	7	-	1090990	0	null	A	10	+	93173511	0	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
532	7	1091119	1091587	10	93176039	93176422	+	+	32	4	2	(ac)	7	+	1091213	1091215	CC	null	10	-	93176164	93176162	73	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
534	7	16244397	16244794	7	16382157	16382520	+	-	2	6	4	(ac)	7	+	16244487	0	null	null	7	+	16382416	0	97	137929	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
536	7	30024867	30025213	7	30028191	30028512	-	+	4	2	8	(ac)	7	-	30025116	30025115	G	null	7	-	30028294	30028293	100	3178	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
537	7	39802025	39802293	7	39813362	39813668	-	+	4	11	6	(ac)	7	-	39802188	0	null	null	7	-	39813448	0	98	11260	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
539	7	44667862	44668155	7	44671189	44671534	-	+	4	12	11	(ac)	7	-	44668061	0	null	null	7	-	44671289	0	100	3228	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
540	7	47995455	47995802	7	48009067	48009383	-	+	4	8	9	(ac)	7	-	47995708	47995707	T	null	7	-	48009180	48009179	98	13472	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
541	7	50087198	50087555	7	50089775	50090072	-	+	4	1	7	(ac)	7	-	50087456	50087455	T	null	7	-	50089894	50089893	99	2438	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
542	7	50617191	50617480	7	50628302	50628705	-	+	4	9	6	(ac)	7	-	50617377	50617376	A	null	7	-	50628396	50628395	95	11019	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
543	7	54266063	54266521	7	54267790	54268151	-	+	4	5	9	(ac)	7	-	54266386	54266385	C	null	7	-	54267904	54267903	74	1518	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
544	7	57851154	57851557	9	104779861	104780189	-	-	32	4	2	(ac)	7	-	57851438	0	null	null	9	+	104780057	0	96	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
545	7	62672538	62672901	7	62677132	62677505	-	+	4	7	9	(ac)	7	-	62672812	62672807	TGGGC	null	7	-	62677234	62677229	98	4422	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
546	7	63415662	63416013	7	63422371	63422749	-	+	4	1	10	(ac)	7	-	63415907	63415905	AT	null	7	-	63422513	63422511	99	6606	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
547	7	66585525	66585994	7	66589048	66589457	-	+	4	1	6	(ac)	7	-	66585853	66585851	TT	null	7	-	66589202	66589200	86	3349	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
548	7	67690755	67691191	7	124958985	124959355	-	-	8	2	6	(ac)	7	-	67691089	0	null	null	7	+	124959205	0	93	57268116	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
549	7	67692530	67692831	7	124961686	124962011	+	+	1	8	9	(ac)	7	+	67692627	0	null	GTT	7	-	124961785	0	100	57269158	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
551	7	79706633	79706967	7	79710060	79710410	-	+	4	9	14	(ac)	7	-	79706872	0	null	TAGTTCTCCTGTAG	7	-	79710153	0	95	3281	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
552	7	80228206	80228596	7	80241203	80241681	-	+	4	4	5	(ac)	7	-	80228465	80228456	AGTTTTTAT	null	7	-	80241698	80241689	80	13233	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
553	7	80240742	80241175	7	80241486	80241819	-	+	4	3	5	(ac)	7	-	80241083	80241080	TCA	null	7	-	80241602	80241599	85	519	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
554	7	81297261	81297503	7	81299391	81299657	+	+	1	5	19	(ac)	7	+	81297349	81297351	AT	null	7	-	81299485	81299483	100	2136	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
555	7	81297734	81298061	7	81312567	81312876	-	-	8	15	14	(ac)	7	-	81297967	81297966	T	null	7	+	81312783	81312784	100	14816	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
556	7	91604582	91604926	7	91609211	91609505	-	+	4	0	6	(-c)	7	-	91604831	91604830	A	null	7	-	91609307	91609306	97	4476	0	0	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
557	7	93661518	93661857	7	93665722	93666025	-	+	4	10	5	(ac)	7	-	93661762	0	null	null	7	-	93665834	0	94	4072	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
559	7	95468035	95468286	7	95474406	95474743	-	+	4	6	11	(ac)	7	-	95468181	95468179	AA	null	7	-	95474497	95474495	100	6316	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
560	7	96275169	96275571	7	100185154	100185528	+	-	2	7	4	(ac)	7	+	96275278	96275279	T	null	7	+	100185437	100185438	99	3910159	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
561	7	96529498	96529868	7	96532592	96532929	-	+	4	12	10	(ac)	7	-	96529768	96529767	A	null	7	-	96532681	96532680	98	2913	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
562	7	102966325	102966552	7	102970581	102970879	-	+	4	9	18	(ac)	7	-	102966463	102966458	TCTCA	null	7	-	102970672	102970667	99	4209	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
563	7	104276999	104277291	7	104279884	104280342	-	+	4	1	6	(ac)	7	-	104277194	104277191	AAT	null	7	-	104279977	104279974	99	2783	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
564	7	104931177	104931482	7	104931699	104932022	+	-	2	4	11	(ac)	7	+	104931224	104931244	CCTGTAATCCCAGCACTTTG	null	7	+	104931915	104931935	98	691	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
565	7	105029436	105029818	7	106868773	106869067	-	+	4	9	8	(ac)	7	-	105029720	105029717	TGG	null	7	-	106868869	106868866	94	1839149	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
567	7	105437097	105437562	7	105440875	105441195	-	+	4	4	10	(ac)	7	-	105437463	0	null	GCC	7	-	105440968	0	95	3505	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
569	7	109843459	109843801	7	111953270	111953547	+	+	1	13	12	(ac)	7	+	109843546	109843551	CACTG	null	7	-	111953393	111953388	99	2109847	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
570	7	109843317	109843654	7	111930747	111931009	-	-	8	9	10	(ac)	7	-	109843563	0	null	null	7	+	111930905	0	99	2087342	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
571	7	116792538	116792892	7	116803010	116803302	-	+	4	10	20	(ac)	7	-	116792796	116792795	A	null	7	-	116803110	116803109	99	10314	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
572	7	118316914	118317239	7	118320908	118321310	-	+	4	6	8	(ac)	7	-	118317133	118317132	A	null	7	-	118321034	118321033	99	3901	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
573	7	119417850	119418169	7	119422067	119422359	-	+	4	5	13	(ac)	7	-	119418073	119418072	T	null	7	-	119422160	119422159	100	4087	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
575	7	121344518	121344772	11	113246961	113247426	-	+	32	7	4	(ac)	7	-	121344659	0	null	null	11	-	113247068	0	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
576	7	121352624	121352953	11	113246535	113246967	+	-	32	3	7	(ac)	7	+	121352755	121352761	TCCTTC	null	11	+	113246874	113246880	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
578	7	122715714	122716148	7	122718420	122718873	-	+	4	4	5	(ac)	7	-	122716054	122716049	AGTTT	null	7	-	122718595	122718590	97	2541	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
579	7	124415675	124416045	7	124451003	124451280	+	-	2	13	11	(ac)	7	+	124415789	0	null	TAAAGT	7	+	124451187	0	91	35398	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
580	7	125472945	125473245	7	125473664	125474049	-	+	4	8	5	(ac)	7	-	125473141	125473138	CAG	null	7	-	125473757	125473754	98	616	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
581	7	128361441	128361754	7	128372214	128372461	-	+	4	10	7	(ac)	7	-	128361659	128361658	A	null	7	-	128372315	128372314	98	10656	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
582	7	128437576	128437961	7	128440801	128441206	-	+	4	9	12	(ac)	7	-	128437846	128437845	A	null	7	-	128440923	128440922	98	3077	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
583	7	129066735	129067068	7	129122849	129123139	+	-	2	6	5	(ac)	7	+	129066837	0	null	AATTATGAGGCATAATTTG	7	+	129123042	0	100	56205	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
584	7	133137599	133137879	7	133138296	133138669	+	-	2	7	5	(ac)	7	+	133137692	133137694	TC	null	7	+	133138561	133138563	85	869	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
585	7	135616738	135617146	7	135620106	135620530	-	-	8	5	3	(ac)	7	-	135617053	135617050	GCA	null	7	+	135620434	135620437	100	3381	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
586	7	136935261	136935592	7	136940131	136940451	-	+	4	5	9	(ac)	7	-	136935493	136935491	AT	null	7	-	136940233	136940231	99	4740	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
587	7	137215107	137215176	7	137219903	137220159	-	+	4	14	17	(ac)	7	-	137215075	0	null	null	7	-	137219994	0	100	4919	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
588	7	138674512	138674900	7	138676198	138676501	-	+	4	6	10	(ac)	7	-	138674800	138674797	CAG	null	7	-	138676309	138676306	90	1509	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
589	7	140424621	140424981	7	140433233	140433537	-	+	4	6	12	(ac)	7	-	140424874	140424873	C	null	7	-	140433328	140433327	99	8454	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
590	7	140453025	140453436	7	144829816	144830142	-	+	4	5	10	(ac)	7	-	140453322	0	null	null	7	-	144829916	0	83	4376594	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
591	7	142613125	142613286	7	142620027	142620223	-	+	4	20	24	(ac)	7	-	142613191	142613190	T	null	7	-	142620120	142620119	100	6929	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
593	7	145237782	145238232	12	5352685	5353139	+	-	32	4	8	(ac)	7	+	145237886	145237888	AG	null	12	+	5353028	5353030	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
594	7	147479925	147480167	7	147483488	147483725	-	+	4	8	14	(ac)	7	-	147480080	147480075	TTCTA	null	7	-	147483582	147483577	94	3502	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
595	7	151625732	151626045	7	151637373	151637751	+	+	1	3	7	(ac)	7	+	151625850	151625853	TGT	null	7	-	151637468	151637465	98	11618	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
596	7	151946395	151946670	7	151961485	151961887	-	+	4	4	4	(ac)	7	-	151946577	0	null	GTA	7	-	151961580	0	97	15003	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
597	7	155103754	155104129	7	155106634	155106978	-	+	4	7	10	(ac)	7	-	155104025	155104023	CT	null	7	-	155106732	155106730	95	2707	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
599	7	158100149	158100405	7	158102486	158102874	-	+	4	4	1	(ac)	7	-	158100300	158100299	G	null	7	-	158102603	158102602	77	2303	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
601	8	2976780	2977155	8	2980970	2981361	-	+	4	3	10	(ac)	8	-	2977058	2977056	TA	null	8	-	2981100	2981098	100	4042	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
603	8	10962908	10963237	8	10970987	10971363	-	+	4	8	8	(ac)	8	-	10963120	10963119	T	null	8	-	10971085	10971084	98	7965	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
604	8	16266547	16266884	8	16271953	16272111	-	+	4	8	18	(ac)	8	-	16266781	16266780	T	null	8	-	16272045	16272044	100	5264	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
605	8	21511662	21511960	8	21528574	21528921	-	+	4	0	6	(-c)	8	-	21511847	0	null	null	8	-	21528672	0	90	16825	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
606	8	23922837	23923150	17	61270270	61270683	-	-	32	7	4	(ac)	8	-	23923059	23923055	AAAG	null	17	+	61270570	61270574	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
607	8	24953745	24954031	8	24960168	24960401	-	+	4	6	14	(ac)	8	-	24953940	24953937	AGC	null	8	-	24960267	24960264	99	6327	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
608	8	26218058	26218320	8	26222396	26222733	-	+	4	12	12	(ac)	8	-	26218226	26218225	G	null	8	-	26222491	26222490	99	4265	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
609	8	37693812	37694085	8	37705644	37705928	-	+	4	5	11	(ac)	8	-	37693989	37693988	A	null	8	-	37705741	37705740	90	11752	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
611	8	42778108	42778455	8	42873417	42873708	-	+	4	5	10	(ac)	8	-	42778334	42778330	TTAT	null	8	-	42873517	42873513	100	95183	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
612	8	42865962	42866320	8	42873292	42873672	-	-	8	7	1	(ac)	8	-	42866209	42866206	AGC	null	8	+	42873543	42873546	99	7334	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
616	8	52911836	52912169	8	52915585	52915854	-	+	4	4	5	(ac)	8	-	52912054	52912053	A	null	8	-	52915706	52915705	93	3652	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
617	8	53173373	53173763	8	53178585	53178844	-	+	4	5	11	(ac)	8	-	53173670	53173669	A	null	8	-	53178681	53178680	98	5011	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
618	8	53446755	53447140	9	8119272	8119630	-	+	32	7	8	(ac)	8	-	53447038	53447034	AATA	null	9	-	8119414	8119410	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
620	8	55221411	55221729	8	55226944	55227217	-	+	4	6	13	(ac)	8	-	55221642	55221636	TTTTCT	null	8	-	55227045	55227039	98	5403	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
622	8	63194905	63195251	8	63197169	63197519	-	+	4	6	6	(ac)	8	-	63195131	63195129	TG	null	8	-	63197277	63197275	100	2146	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
623	8	63280047	63280356	8	63282799	63283168	-	+	4	10	7	(ac)	8	-	63280259	0	null	null	8	-	63282903	0	100	2644	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
624	8	64518111	64518492	8	64525290	64525668	-	+	4	4	12	(ac)	8	-	64518372	64518371	A	null	8	-	64525428	64525427	100	7056	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
625	8	64521309	64521641	8	64527251	64527590	-	+	4	5	5	(ac)	8	-	64521546	64521544	AA	null	8	-	64527351	64527349	95	5805	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
626	8	65806189	65806550	8	94618959	94619333	-	-	8	5	8	(ac)	8	-	65806455	65806451	TTCT	null	8	+	94619230	94619234	70	28812775	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
627	8	65809169	65809546	8	94628486	94628750	+	+	1	6	8	(ac)	8	+	65809258	65809261	GAA	null	8	-	94628588	94628585	100	28819330	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
628	8	66970155	66970425	8	66974503	66974870	-	+	4	4	7	(ac)	8	-	66970328	66970327	A	null	8	-	66974597	66974596	100	4269	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
630	8	67860800	67861065	8	67878896	67879155	-	+	4	8	4	(ac)	8	-	67860974	67860972	GG	null	8	-	67878993	67878991	92	18019	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
631	8	71828820	71829158	8	71834268	71834573	-	+	4	8	6	(ac)	8	-	71829064	71829062	TA	null	8	-	71834368	71834366	100	5304	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
632	8	72057970	72058290	8	83915715	83916105	-	-	8	7	4	(ac)	8	-	72058185	72058181	CACT	null	8	+	83915995	83915999	100	11857810	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
633	8	72062603	72062938	8	83922239	83922549	+	+	1	10	10	(ac)	8	+	72062713	72062714	C	null	8	-	83922330	83922329	100	11859617	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
634	8	73992092	73992345	8	74387438	74387738	-	+	4	2	7	(ac)	8	-	73992245	73992243	CT	null	8	-	74387530	74387528	100	395285	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
635	8	76198219	76198577	8	76202759	76203075	-	+	4	6	10	(ac)	8	-	76198481	76198479	TT	null	8	-	76202856	76202854	99	4375	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
637	8	78038150	78038453	8	78041415	78041703	-	+	4	10	7	(ac)	8	-	78038356	78038355	T	null	8	-	78041512	78041511	99	3156	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
638	8	78117759	78118138	8	78120572	78120916	+	-	2	5	7	(ac)	8	+	78117868	78117869	A	null	8	+	78120824	78120825	100	2956	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
639	8	86116034	86116407	8	86118467	86118851	-	+	4	9	5	(ac)	8	-	86116314	86116312	CA	null	8	-	86118571	86118569	100	2257	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
641	8	87469217	87469513	8	133853432	133853617	+	-	2	14	15	(ac)	8	+	87469315	87469317	TC	null	8	+	133853512	133853514	99	46384197	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
642	8	88729350	88729649	8	88730322	88730701	+	-	2	6	7	(ac)	8	+	88729439	88729441	TC	null	8	+	88730607	88730609	89	1168	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
643	8	92294193	92294531	8	92304585	92304961	-	+	4	6	9	(ac)	8	-	92294429	92294428	T	null	8	-	92304678	92304677	98	10249	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
644	8	94589489	94589823	8	94594459	94594871	-	+	4	6	6	(ac)	8	-	94589728	94589726	TA	null	8	-	94594560	94594558	85	4832	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
645	8	94934480	94934871	8	94937000	94937226	-	+	4	4	8	(ac)	8	-	94934778	94934776	CA	null	8	-	94937091	94937089	94	2313	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
646	8	100571801	100572137	X	103644878	103645294	-	+	32	3	4	(ac)	8	-	100572031	100572029	AA	null	X	-	103644970	103644968	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
648	8	104084838	104085172	8	104093634	104094034	-	+	4	5	3	(ac)	8	-	104085079	104085078	G	null	8	-	104093737	104093736	94	8658	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
649	8	106294178	106294597	14	20877460	20877978	+	-	32	1	5	(ac)	8	+	106294291	106294299	AAAATGCT	null	14	+	20877890	20877898	97	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
650	8	110172546	110172823	8	110174671	110174906	-	+	4	7	9	(ac)	8	-	110172738	110172737	C	null	8	-	110174766	110174765	69	2028	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
652	8	116491216	116491426	8	116556642	116557034	-	+	4	18	13	(ac)	8	-	116491299	0	null	ATTATTAC	8	-	116556734	0	97	65435	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
655	8	117999453	117999868	8	122075115	122075524	-	+	4	7	6	(ac)	8	-	117999735	0	null	null	8	-	122075211	0	100	4075476	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
656	8	119333377	119333693	8	119338206	119338501	-	+	4	12	14	(ac)	8	-	119333599	119333598	T	null	8	-	119338299	119338298	94	4700	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
657	8	122152444	122152762	8	122156768	122157120	-	+	4	5	8	(ac)	8	-	122152669	0	null	null	8	-	122156859	0	98	4190	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
658	8	124107154	124107423	8	124110379	124110699	-	+	4	7	10	(ac)	8	-	124107326	124107324	AA	null	8	-	124110481	124110479	97	3155	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
659	8	125323664	125323930	8	125333903	125334286	-	+	4	6	10	(ac)	8	-	125323833	125323831	TT	null	8	-	125333994	125333992	95	10161	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
660	8	126057761	126058126	8	126060112	126060454	-	+	4	5	7	(ac)	8	-	126058022	0	null	GCCAGGTACAGTAGT	8	-	126060236	0	94	2214	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
662	8	128424854	128425308	8	131696572	131696960	-	+	4	0	6	(-c)	8	-	128425209	128425206	TGG	null	8	-	131696680	131696677	100	3271471	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
663	8	128580133	128580402	8	128625255	128625640	-	+	4	9	12	(ac)	8	-	128580310	128580307	TTG	null	8	-	128625350	128625347	100	45040	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
664	8	129543769	129544090	8	129546283	129546662	-	+	4	4	7	(ac)	8	-	129543997	129543996	T	null	8	-	129546386	129546385	100	2389	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
665	8	129597639	129597966	8	129609237	129609547	-	+	4	9	14	(ac)	8	-	129597873	0	null	T	8	-	129609327	0	100	11454	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
667	8	131605664	131606019	8	131608352	131608789	-	+	4	1	4	(ac)	8	-	131605884	131605881	TCT	null	8	-	131608449	131608446	98	2565	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
669	8	134151404	134151684	8	134156502	134156840	-	+	4	8	4	(ac)	8	-	134151577	134151576	A	null	8	-	134156612	134156611	100	5035	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
670	8	135655581	135655933	8	135659755	135660002	-	+	4	16	12	(ac)	8	-	135655826	0	null	null	8	-	135659859	0	99	4033	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
671	8	136422008	136422348	8	136438318	136438755	-	+	4	9	8	(ac)	8	-	136422255	136422254	A	null	8	-	136438436	136438435	89	16181	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
672	8	138317803	138318228	8	138321377	138321795	-	+	4	5	4	(ac)	8	-	138318115	138318114	A	null	8	-	138321498	138321497	97	3383	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
673	8	138701998	138702283	8	138710824	138711127	-	+	4	12	12	(ac)	8	-	138702189	138702187	AC	null	8	-	138710915	138710913	100	8726	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
674	8	143979892	143980205	8	143986022	143986422	-	+	4	1	6	(ac)	8	-	143980106	143980105	G	null	8	-	143986126	143986125	69	6020	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
675	8	144591058	144591531	8	144599994	144600403	-	+	4	1	6	(ac)	8	-	144591422	144591421	C	null	8	-	144600162	144600161	99	8740	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
676	8	144760956	144761329	8	144780733	144781067	-	+	4	5	6	(ac)	8	-	144761222	144761219	GTT	null	8	-	144780833	144780830	95	19611	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
677	9	7192265	7192522	9	7203042	7203367	-	+	4	17	20	(ac)	9	-	7192420	7192419	G	null	9	-	7203136	7203135	100	10716	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
680	9	31426339	31426720	9	31429844	31430232	-	+	4	4	5	(ac)	9	-	31426628	31426626	AT	null	9	-	31430009	31430007	98	3381	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
682	9	36124596	36124938	9	36143745	36144095	-	+	4	5	10	(ac)	9	-	36124816	36124814	TC	null	9	-	36143838	36143836	94	19022	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
683	9	38036142	38036562	X	34491563	34491924	-	+	32	4	3	(ac)	9	-	38036419	38036417	TA	null	X	-	34491655	34491653	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
684	9	38045496	38045946	9	38072638	38072952	+	+	1	7	7	(ac)	9	+	38045590	38045593	GAG	null	9	-	38072734	38072731	98	27144	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
685	9	38188553	38188890	9	38202754	38203047	-	+	4	5	7	(ac)	9	-	38188796	38188793	CCA	null	9	-	38202860	38202857	97	14064	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
687	9	71096211	71096558	9	71100371	71100724	-	+	4	2	9	(ac)	9	-	71096467	71096465	CA	null	9	-	71100486	71100484	99	4019	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
688	9	74403237	74403595	12	91003085	91003401	-	-	32	5	10	(ac)	9	-	74403487	74403486	A	null	12	+	91003302	91003303	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
689	9	74416454	74416752	X	34479218	34479471	+	-	32	18	24	(ac)	9	+	74416548	74416552	ATTT	null	X	+	34479377	34479381	95	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
690	9	76566704	76566979	9	76575795	76576127	-	+	4	9	5	(ac)	9	-	76566866	76566863	CAG	null	9	-	76575892	76575889	99	9026	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
691	9	77805324	77805648	9	77810382	77810758	-	+	4	7	7	(ac)	9	-	77805552	77805550	TG	null	9	-	77810490	77810488	100	4938	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
693	9	91088145	91088503	9	91113201	91113517	+	-	2	3	11	(ac)	9	+	91088244	0	null	C	9	+	91113425	0	99	25181	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
694	9	92478149	92478479	9	92479753	92480169	-	+	4	4	8	(ac)	9	-	92478387	92478383	CACC	null	9	-	92479852	92479848	86	1465	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
695	9	92825166	92825409	9	92825715	92826062	-	+	4	10	8	(ac)	9	-	92825314	92825312	CT	null	9	-	92825816	92825814	74	502	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
696	9	93852470	93852723	9	93853305	93853648	-	+	4	5	10	(ac)	9	-	93852624	93852621	AGT	null	9	-	93853400	93853397	90	776	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
697	9	96059512	96059845	9	96064232	96064643	-	+	4	8	8	(ac)	9	-	96059734	96059733	C	null	9	-	96064356	96064355	98	4622	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
698	9	102004417	102004829	9	102029224	102029596	+	-	2	4	6	(ac)	9	+	102004554	102004556	TC	null	9	+	102029491	102029493	100	24937	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
699	9	102399889	102400143	9	102409098	102409394	-	+	4	6	5	(ac)	9	-	102400050	0	null	A	9	-	102409210	0	100	9160	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
700	9	103006987	103007281	9	103011525	103011826	-	+	4	9	10	(ac)	9	-	103007180	103007178	CA	null	9	-	103011616	103011614	100	4436	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
701	9	110942028	110942356	9	110959645	110960006	+	-	2	10	8	(ac)	9	+	110942127	110942130	AAC	null	9	+	110959911	110959914	96	17784	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
702	9	112404776	112405129	9	112407324	112407763	-	+	4	7	5	(ac)	9	-	112405029	0	null	null	9	-	112407437	0	90	2408	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
703	9	115619802	115620187	9	115625657	115625987	-	+	4	2	10	(ac)	9	-	115620075	115620073	TG	null	9	-	115625748	115625746	100	5673	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
704	9	116020256	116020562	9	116024356	116024701	-	+	4	9	8	(ac)	9	-	116020474	116020469	CAAAC	null	9	-	116024449	116024444	93	3975	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
705	9	116895869	116896314	9	116907488	116907877	-	+	4	4	1	(ac)	9	-	116896209	0	null	TGGTCCATT	9	-	116907639	0	90	11430	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
706	9	120376923	120377244	9	120442263	120442534	-	+	4	6	7	(ac)	9	-	120377148	120377142	ATTAAA	null	9	-	120442361	120442355	98	65213	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
707	9	120408804	120409118	9	120419298	120419632	-	+	4	6	10	(ac)	9	-	120409024	120409021	AAC	null	9	-	120419400	120419397	100	10376	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
708	9	121526398	121526761	19	58460218	58460542	+	-	32	6	8	(ac)	9	+	121526497	121526498	T	null	19	+	58460434	58460435	64	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
709	9	124844637	124844967	9	124847491	124847776	+	-	2	8	5	(ac)	9	+	124844729	124844734	AACAT	null	9	+	124847678	124847683	100	2949	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
710	9	125048822	125049139	9	125066010	125066347	-	+	4	13	12	(ac)	9	-	125049025	0	null	null	9	-	125066109	0	100	17084	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
711	9	125323097	125323473	9	125337638	125337954	-	+	4	8	6	(ac)	9	-	125323370	125323369	A	null	9	-	125337728	125337727	97	14358	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
712	9	128769083	128769481	9	128774358	128774694	-	+	4	4	8	(ac)	9	-	128769378	128769377	C	null	9	-	128774466	128774465	79	5088	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
713	9	131092873	131093256	9	131102303	131102666	-	+	4	7	6	(ac)	9	-	131093153	131093151	AG	null	9	-	131102399	131102397	93	9246	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
715	9	134341463	134341852	9	134350215	134350561	-	+	4	8	5	(ac)	9	-	134341760	134341756	TCTG	null	9	-	134350313	134350309	100	8553	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
718	10	1103962	1104262	10	1156075	1156456	+	-	2	3	7	(ac)	10	+	1104056	1104059	TCT	null	10	+	1156342	1156345	86	52286	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
719	10	2080879	2081247	10	64775980	64776259	-	-	8	5	10	(ac)	10	-	2081152	0	null	null	10	+	64776163	0	98	62695011	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
720	10	2113134	2113449	11	82179499	82179841	-	-	32	12	12	(ac)	10	-	2113363	2113356	AAAAAAA	null	11	+	82179746	82179753	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
721	10	2758039	2758319	10	2763036	2763321	-	+	4	8	9	(ac)	10	-	2758204	2758203	A	null	10	-	2763137	2763136	93	4933	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
723	10	4718825	4719106	10	4724734	4724976	-	+	4	1	10	(ac)	10	-	4719016	4719013	GCA	null	10	-	4724825	4724822	99	5809	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
726	10	6796061	6796379	10	6800857	6801230	-	+	4	5	11	(ac)	10	-	6796260	6796259	A	null	10	-	6800956	6800955	99	4696	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
728	10	10299225	10299521	10	124405134	124405400	+	+	1	22	18	(ac)	10	+	10299319	10299323	ATGG	null	10	-	124405225	124405221	96	114105906	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
731	10	14322916	14323251	10	14333050	14333412	-	+	4	5	0	(a-)	10	-	14323153	14323152	G	null	10	-	14333163	14333162	99	10010	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
732	10	14619404	14619785	10	14625720	14626041	-	+	4	9	10	(ac)	10	-	14619681	14619679	GG	null	10	-	14625818	14625816	100	6137	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
733	10	14965574	14965908	10	14973484	14973865	-	+	4	4	10	(ac)	10	-	14965804	0	null	null	10	-	14973582	0	95	7778	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
734	10	15662647	15663000	10	15675221	15675593	-	+	4	8	6	(ac)	10	-	15662911	15662907	TTTA	null	10	-	15675316	15675312	84	12405	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
735	10	17089531	17089878	10	17094417	17094737	-	+	4	5	12	(ac)	10	-	17089785	17089784	A	null	10	-	17094539	17094538	98	4754	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
736	10	18824854	18825322	10	18828409	18828753	-	+	4	5	0	(a-)	10	-	18825224	18825222	CA	null	10	-	18828506	18828504	97	3282	0	0	no cn change seen	no.cn.change	copy.number.visual.inspection	a	MEDIUM	red	NA
737	10	19590513	19590875	12	2059515	2059964	+	-	32	4	8	(ac)	10	+	19590610	0	null	null	12	+	2059849	0	94	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
739	10	21803357	21803703	10	21878882	21879214	+	-	2	15	15	(ac)	10	+	21803438	0	null	AGTTAAGTGCAAC	10	+	21879110	0	99	75672	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
740	10	28087862	28088178	10	28090728	28090911	-	+	4	11	14	(ac)	10	-	28088076	28088073	CCA	null	10	-	28090823	28090820	98	2747	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
742	10	32280681	32280978	10	32286604	32287028	-	+	4	5	0	(a-)	10	-	32280853	32280850	TTC	null	10	-	32286709	32286706	99	5856	0	0	no cn change seen	no.cn.change	copy.number.visual.inspection	a	MEDIUM	red	NA
743	10	35392761	35393084	10	35394823	35395189	-	+	4	6	6	(ac)	10	-	35392987	0	null	null	10	-	35394944	0	99	1957	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
744	10	36359775	36360186	10	36398069	36398474	-	+	4	3	4	(ac)	10	-	36360096	36360093	ATT	null	10	-	36398222	36398219	99	38126	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
745	10	37161195	37161527	10	37165831	37166178	-	+	4	9	10	(ac)	10	-	37161432	0	null	null	10	-	37165922	0	100	4490	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
746	10	37788274	37788537	10	37842668	37842942	+	-	2	16	13	(ac)	10	+	37788369	37788370	A	null	10	+	37842847	37842848	98	54478	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
747	10	38363666	38363990	10	38369622	38369975	-	+	4	4	2	(ac)	10	-	38363893	38363891	AC	null	10	-	38369739	38369737	99	5846	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
748	10	46007967	46008350	10	54646047	54646275	+	-	2	5	5	(ac)	10	+	46008057	46008060	AGC	null	10	+	54646179	54646182	99	8638122	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
749	10	50297280	50297618	10	50309745	50310118	-	+	4	3	7	(ac)	10	-	50297495	50297493	AA	null	10	-	50309853	50309851	100	12358	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
750	10	53518210	53518651	10	53519195	53519598	+	-	2	4	7	(ac)	10	+	53518349	53518351	TC	null	10	+	53519507	53519509	90	1158	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
751	10	55152331	55152597	10	55157236	55157494	-	+	4	3	4	(ac)	10	-	55152487	55152485	AT	null	10	-	55157331	55157329	75	4844	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
752	10	61198467	61198711	10	61207469	61207715	-	+	4	8	11	(ac)	10	-	61198610	61198607	TTT	null	10	-	61207565	61207562	99	8955	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
753	10	62695783	62696004	10	92438364	92438635	+	-	2	12	6	(ac)	10	+	62695880	62695882	GT	null	10	+	92438531	92438533	100	29742651	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
754	10	63372275	63372548	10	63378614	63378958	-	+	4	10	8	(ac)	10	-	63372448	63372447	C	null	10	-	63378710	63378709	100	6262	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
755	10	63414160	63414480	10	63434407	63434810	-	+	4	8	6	(ac)	10	-	63414362	63414360	AA	null	10	-	63434514	63434512	99	20152	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
756	10	64354581	64354911	10	64441715	64442077	+	-	2	13	4	(ac)	10	+	64354681	64354682	T	null	10	+	64441983	64441984	98	87302	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
757	10	66829234	66829585	X	10044522	10044861	+	+	32	8	11	(ac)	10	+	66829347	66829348	A	null	X	-	10044627	10044626	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
758	10	66829147	66829489	X	10043906	10044166	-	-	32	16	17	(ac)	10	-	66829397	0	null	null	X	+	10044069	0	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
759	10	70309548	70309892	10	70455581	70455909	+	-	2	8	14	(ac)	10	+	70309648	0	null	null	10	+	70455817	0	97	146169	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
760	10	77163282	77163531	10	77164264	77164641	+	-	2	14	5	(ac)	10	+	77163374	77163376	TG	null	10	+	77164545	77164547	70	1171	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
763	10	84563859	84564101	10	84573422	84573660	-	+	4	29	42	(ac)	10	-	84564011	84564009	CA	null	10	-	84573514	84573512	98	9503	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
764	10	87589007	87589246	10	87601679	87601949	-	+	4	27	38	(ac)	10	-	87589149	87589143	TGTTTT	null	10	-	87601772	87601766	100	12623	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
765	10	87795841	87796074	10	87804366	87804636	-	+	4	26	31	(ac)	10	-	87795981	87795979	TC	null	10	-	87804456	87804454	99	8475	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
767	10	89378294	89378538	10	121910025	121910222	+	-	2	37	36	(ac)	10	+	89378384	89378387	GCT	null	10	+	121910130	121910133	97	32531746	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
769	10	98453264	98453602	10	98457741	98457994	-	+	4	7	9	(ac)	10	-	98453506	0	null	T	10	-	98457834	0	84	4328	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
770	10	100128031	100128430	10	100130639	100130999	-	+	4	8	10	(ac)	10	-	100128330	100128329	C	null	10	-	100130739	100130738	100	2409	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
772	10	123705766	123706199	11	18737137	18737529	+	-	32	7	5	(ac)	10	+	123705857	123705858	A	null	11	+	18737424	18737425	85	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
774	10	123773590	123773850	10	123783093	123783413	+	-	2	17	25	(ac)	10	+	123773680	0	null	null	10	+	123783241	0	97	9561	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
775	10	127374063	127374424	10	127390806	127391105	-	+	4	5	7	(ac)	10	-	127374324	0	null	T	10	-	127390910	0	94	16586	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
776	10	127957672	127958090	10	129030104	129030429	-	+	4	3	8	(ac)	10	-	127957977	127957972	TTGAA	null	10	-	129030209	129030204	93	1072232	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
779	11	2525750	2526125	11	33723396	33723763	-	+	4	6	5	(ac)	11	-	2526011	0	null	null	11	-	33723493	0	92	31197482	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
780	11	7561829	7562158	11	7566938	7567326	-	+	4	6	6	(ac)	11	-	7562060	0	null	CAT	11	-	7567032	0	98	4972	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
783	11	12074327	12074617	11	12081589	12082075	-	+	4	4	1	(ac)	11	-	12074520	12074517	TGC	null	11	-	12081693	12081690	94	7173	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
784	11	16549668	16549970	11	16555910	16556222	-	+	4	8	8	(ac)	11	-	16549874	16549871	AAG	null	11	-	16556007	16556004	98	6133	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
785	11	24186008	24186369	X	82308745	82309223	-	-	32	4	5	(ac)	11	-	24186249	24186248	T	null	X	+	82309127	82309128	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
786	11	24188168	24188576	X	82309179	82309666	+	+	32	6	0	(a-)	11	+	24188268	24188272	GGAG	null	X	-	82309288	82309284	100	NA	0	0	no cn change seen	no.cn.change	copy.number.visual.inspection	a	MEDIUM	red	NA
790	11	34171749	34172115	16	31047738	31048197	+	-	32	1	4	(ac)	11	+	34171908	34171913	TGTTT	null	16	+	31048094	31048099	95	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
791	11	34238290	34238662	11	34255675	34255977	-	+	4	3	5	(ac)	11	-	34238550	0	null	null	11	-	34255775	0	98	17225	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
792	11	34617616	34618013	11	34623822	34624139	-	+	4	9	6	(ac)	11	-	34617917	34617916	T	null	11	-	34623918	34623917	100	6001	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
794	11	39924997	39925448	11	39928496	39928802	-	+	4	4	0	(a-)	11	-	39925335	39925333	GT	null	11	-	39928644	39928642	99	3309	1	0	a	bkpt.assoc.cn.change	copy.number.visual.inspection	a	HIGH	red	LATE
795	11	42200739	42201188	11	42211391	42211672	-	+	4	4	7	(ac)	11	-	42201090	42201089	A	null	11	-	42211489	42211488	97	10399	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
796	11	42234084	42234385	11	42338039	42338336	+	-	2	9	9	(ac)	11	+	42234177	0	null	TA	11	+	42338243	0	94	104066	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
798	11	59698837	59699115	11	59699685	59700078	-	-	8	9	6	(ac)	11	-	59699009	0	null	null	11	+	59699977	0	90	968	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
799	11	59700179	59700529	11	59703305	59703585	+	+	1	6	9	(ac)	11	+	59700262	59700264	CT	null	11	-	59703403	59703401	100	3141	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
800	11	60655477	60655828	11	60660869	60661203	-	+	4	7	5	(ac)	11	-	60655734	60655730	TCTT	null	11	-	60660966	60660962	65	5232	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
801	11	63058105	63058351	11	63061301	63061622	-	+	4	8	2	(ac)	11	-	63058253	63058252	A	null	11	-	63061395	63061394	69	3142	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
803	11	70237897	70238199	11	70241427	70241897	-	+	4	3	5	(ac)	11	-	70238101	70238099	CC	null	11	-	70241538	70241536	84	3437	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
804	11	71924185	71924464	11	71931327	71931640	-	+	4	10	6	(ac)	11	-	71924374	71924370	ATGA	null	11	-	71931417	71931413	99	7043	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
806	11	73577666	73578030	11	73583789	73584020	-	+	4	5	8	(ac)	11	-	73577926	73577923	TCT	null	11	-	73583888	73583885	100	5962	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
807	11	80676263	80676458	11	80684399	80684722	-	+	4	7	8	(ac)	11	-	80676348	80676347	G	null	11	-	80684491	80684490	100	8143	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
808	11	81338815	81339031	11	81343267	81343609	-	+	4	10	7	(ac)	11	-	81338936	81338932	ATTA	null	11	-	81343357	81343353	79	4421	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
809	11	83104814	83105163	11	83106660	83107129	-	+	4	9	2	(ac)	11	-	83105045	0	null	null	11	-	83106762	0	99	1717	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
810	11	85422285	85422616	11	85428081	85428369	-	+	4	16	15	(ac)	11	-	85422519	85422515	TTTG	null	11	-	85428177	85428173	99	5658	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
811	11	85952834	85953105	11	87440331	87440585	-	+	4	7	6	(ac)	11	-	85953013	85953008	TTTCA	null	11	-	87440440	87440435	100	1487427	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
813	11	87151103	87151372	11	87153663	87154001	-	+	4	5	4	(ac)	11	-	87151277	87151275	TC	null	11	-	87153759	87153757	94	2482	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
814	11	93476874	93477269	11	93482768	93483118	-	+	4	3	5	(ac)	11	-	93477170	93477169	T	null	11	-	93482860	93482859	99	5690	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
815	11	93537994	93538424	11	93543164	93543488	-	+	4	5	5	(ac)	11	-	93538334	93538332	TG	null	11	-	93543255	93543253	100	4921	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
816	11	95757485	95757790	11	95758636	95758935	+	-	2	11	12	(ac)	11	+	95757578	95757580	AG	null	11	+	95758835	95758837	74	1257	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
817	11	97207631	97207995	11	97212298	97212587	-	+	4	0	11	(-c)	11	-	97207893	97207891	AT	null	11	-	97212428	97212426	100	4535	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
818	11	102730023	102730393	11	102734391	102734708	-	+	4	2	5	(ac)	11	-	102730303	0	null	GAA	11	-	102734518	0	100	4215	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
819	11	102917559	102917940	11	102926447	102926743	-	+	4	3	11	(ac)	11	-	102917848	102917846	AG	null	11	-	102926587	102926585	100	8739	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
822	11	104885430	104885789	11	104892046	104892551	+	-	2	5	3	(ac)	11	+	104885536	104885537	C	null	11	+	104892449	104892450	100	6913	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
823	11	113245182	113245486	11	113249614	113249998	-	+	4	4	6	(ac)	11	-	113245390	0	null	null	11	-	113249739	0	99	4349	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
824	11	117065155	117065585	11	117067849	117068333	-	+	4	5	3	(ac)	11	-	117065406	0	null	null	11	-	117067946	0	75	2540	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
825	11	117067410	117067858	11	117070331	117070630	-	+	4	10	5	(ac)	11	-	117067763	0	null	null	11	-	117070434	0	100	2671	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
826	11	129279029	129279393	11	129283910	129284300	-	+	4	5	3	(ac)	11	-	129279278	129279275	AAA	null	11	-	129284012	129284009	94	4734	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
827	11	129792050	129792315	11	129811327	129811592	-	+	4	21	16	(ac)	11	-	129792214	129792211	GAT	null	11	-	129811425	129811422	99	19211	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
828	11	131017689	131018021	11	131063312	131063633	+	-	2	13	7	(ac)	11	+	131017787	131017789	TT	null	11	+	131063532	131063534	100	45745	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
829	12	1090813	1091271	12	3485802	3486161	-	+	4	2	5	(ac)	12	-	1091139	1091137	GG	null	12	-	3485903	3485901	96	2394764	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
831	12	1885441	1885753	12	1887752	1888135	-	+	4	7	11	(ac)	12	-	1885659	1885658	A	null	12	-	1887862	1887861	100	2203	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
833	12	5206735	5207136	12	5209648	5209908	-	+	4	8	9	(ac)	12	-	5207047	5207046	A	null	12	-	5209739	5209738	95	2692	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
834	12	5381301	5381559	12	5386717	5386987	-	+	4	10	3	(ac)	12	-	5381468	5381467	C	null	12	-	5386808	5386807	95	5340	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
835	12	5405602	5406040	12	5408089	5408353	-	+	4	4	7	(ac)	12	-	5405948	5405944	GAAG	null	12	-	5408201	5408197	99	2253	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
836	12	5959761	5960036	12	5961389	5961822	-	+	4	4	7	(ac)	12	-	5959932	0	null	null	12	-	5961487	0	94	1555	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
837	12	6858451	6858719	12	6865056	6865385	-	+	4	3	9	(ac)	12	-	6858622	0	null	null	12	-	6865157	0	95	6535	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
839	12	9908491	9908875	12	9936383	9936755	-	+	4	10	6	(ac)	12	-	9908786	9908779	AGAATCA	null	12	-	9936490	9936483	99	27704	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
840	12	12019089	12019470	12	12245554	12245821	+	-	2	7	9	(ac)	12	+	12019192	12019194	TG	null	12	+	12245724	12245726	99	226532	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
841	12	12405534	12405793	12	12412578	12412871	-	+	4	8	6	(ac)	12	-	12405706	12405703	AGG	null	12	-	12412669	12412666	99	6963	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
842	12	13684033	13684421	12	16098203	16098636	+	-	2	3	6	(ac)	12	+	13684132	13684133	A	null	12	+	16098492	16098493	100	2414360	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
844	12	17861678	17861933	12	17864417	17864746	-	+	4	10	16	(ac)	12	-	17861839	0	null	null	12	-	17864523	0	74	2684	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
845	12	20747406	20747776	12	20749809	20750146	-	+	4	8	5	(ac)	12	-	20747677	0	null	null	12	-	20749908	0	100	2231	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
846	12	21417475	21417898	12	21418522	21418896	-	+	4	6	0	(a-)	12	-	21417797	21417795	TC	null	12	-	21418633	21418631	89	836	0	0	no cn change seen	no.cn.change	copy.number.visual.inspection	a	MEDIUM	red	NA
847	12	23333468	23333817	14	85471108	85471428	+	+	32	6	11	(ac)	12	+	23333556	23333559	TCC	null	14	-	85471209	85471206	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
848	12	24032364	24032592	18	42245193	42245634	+	-	32	6	9	(ac)	12	+	24032462	24032463	A	null	18	+	42245539	42245540	97	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
849	12	24032520	24032957	18	42245681	42246096	-	+	32	2	4	(ac)	12	-	24032812	24032811	C	null	18	-	42245776	42245775	96	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
850	12	24772541	24772923	12	24774511	24774896	+	-	2	7	4	(ac)	12	+	24772635	0	null	null	12	+	24774806	0	69	2171	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
851	12	25592757	25593119	12	25596052	25596365	-	+	4	7	8	(ac)	12	-	25593018	25593017	A	null	12	-	25596146	25596145	100	3128	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
852	12	27388077	27388353	12	27404926	27405311	-	+	4	5	5	(ac)	12	-	27388244	0	null	null	12	-	27405036	0	97	16792	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
853	12	29586746	29587024	12	29591957	29592319	-	+	4	8	7	(ac)	12	-	29586913	29586911	TT	null	12	-	29592056	29592054	99	5143	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
854	12	32021909	32022231	12	32023929	32024283	-	+	4	5	5	(ac)	12	-	32022117	32022116	C	null	12	-	32024031	32024030	97	1914	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
855	12	42876486	42876893	12	42878151	42878499	-	+	4	8	2	(ac)	12	-	42876766	42876764	CT	null	12	-	42878277	42878275	98	1511	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
856	12	45680383	45680732	12	45681215	45681585	-	+	4	3	8	(ac)	12	-	45680623	45680622	A	null	12	-	45681315	45681314	90	692	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
859	12	57279182	57279613	12	57295663	57295955	-	+	4	6	7	(ac)	12	-	57279495	57279494	T	null	12	-	57295765	57295764	98	16270	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
861	12	58917141	58917600	12	58922214	58922598	-	+	4	2	6	(ac)	12	-	58917503	58917502	C	null	12	-	58922330	58922329	94	4827	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
862	12	61497685	61498046	12	61498360	61498730	-	+	4	8	7	(ac)	12	-	61497925	61497923	CC	null	12	-	61498451	61498449	90	526	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
863	12	61608092	61608479	12	61612811	61613270	-	+	4	1	6	(ac)	12	-	61608350	61608348	AT	null	12	-	61612907	61612905	100	4557	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
864	12	70215801	70216111	12	70218631	70219089	-	+	4	2	6	(ac)	12	-	70215996	70215992	CAAA	null	12	-	70218726	70218722	80	2730	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
865	12	74775909	74776273	12	74779480	74779809	-	+	4	7	10	(ac)	12	-	74776182	74776174	TATTATTT	null	12	-	74779573	74779565	99	3391	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
866	12	81713317	81713688	12	81722866	81723299	-	+	4	7	5	(ac)	12	-	81713572	0	null	CC	12	-	81722976	0	95	9404	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
867	12	84408296	84408696	12	84410935	84411288	-	+	4	5	10	(ac)	12	-	84408600	84408599	C	null	12	-	84411047	84411046	69	2447	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
869	12	94847847	94848193	X	141105764	141106188	+	-	32	4	8	(ac)	12	+	94847939	94847940	T	null	X	+	141106070	141106071	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
872	12	105960870	105961255	19	38777187	38777650	+	+	32	7	3	(ac)	12	+	105960988	105960990	AG	null	19	-	38777285	38777283	95	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
873	12	107125747	107126126	12	107129564	107129893	-	+	4	5	6	(ac)	12	-	107126037	107126035	CT	null	12	-	107129681	107129679	100	3644	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
874	12	110310583	110310865	12	110327502	110327738	-	+	4	18	15	(ac)	12	-	110310776	110310771	CCACA	null	12	-	110327595	110327590	99	16819	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
876	12	117839034	117839348	12	117840575	117840886	-	+	4	18	10	(ac)	12	-	117839247	117839244	AGT	null	12	-	117840668	117840665	85	1421	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
877	12	118639251	118639647	12	118642935	118643338	-	+	4	5	5	(ac)	12	-	118639546	118639545	G	null	12	-	118643027	118643026	99	3481	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
878	12	127315175	127315532	12	127316652	127316931	+	-	2	16	15	(ac)	12	+	127315283	127315285	TT	null	12	+	127316830	127316832	95	1547	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
879	12	128255580	128255895	12	128257714	128258071	-	+	4	8	5	(ac)	12	-	128255799	0	null	TTG	12	-	128257808	0	99	2009	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
880	12	133298748	133299132	12	133302890	133303330	-	+	4	3	7	(ac)	12	-	133299031	133299030	A	null	12	-	133303031	133303030	99	4000	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
882	13	33355129	33355438	13	33361967	33362422	-	+	4	5	9	(ac)	13	-	33355341	33355339	GA	null	13	-	33362059	33362057	99	6718	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
883	13	33642358	33642715	13	33647932	33648260	-	+	4	9	3	(ac)	13	-	33642592	33642591	A	null	13	-	33648049	33648048	90	5457	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
885	13	41420892	41421181	20	33025432	33025835	+	-	32	6	10	(ac)	13	+	41420986	41420989	CTC	null	20	+	33025743	33025746	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
887	13	48936130	48936451	13	48940510	48940828	-	+	4	14	9	(ac)	13	-	48936357	48936354	TAA	null	13	-	48940608	48940605	99	4251	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
888	13	50288599	50288849	13	50292198	50292523	-	+	4	8	6	(ac)	13	-	50288754	0	null	null	13	-	50292290	0	100	3536	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
889	13	50863205	50863491	13	50882880	50883155	-	+	4	5	9	(ac)	13	-	50863397	50863394	CAA	null	13	-	50882976	50882973	100	19579	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
892	13	57453000	57453251	13	57458119	57458342	-	+	4	5	12	(ac)	13	-	57453159	57453157	CA	null	13	-	57458213	57458211	98	5054	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
894	13	73632651	73633093	13	73633386	73633819	+	-	2	5	1	(ac)	13	+	73632794	73632796	GA	null	13	+	73633731	73633733	89	937	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
895	13	74637604	74637833	13	74641348	74641616	-	+	4	9	7	(ac)	13	-	74637744	74637742	TA	null	13	-	74641440	74641438	96	3696	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
896	13	78529165	78529586	13	78534049	78534360	-	+	4	2	9	(ac)	13	-	78529479	78529477	TA	null	13	-	78534162	78534160	94	4683	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
898	14	21346428	21346860	14	21352144	21352610	-	+	4	3	5	(ac)	14	-	21346742	0	null	null	14	-	21352273	0	100	5531	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
899	14	23039805	23040079	14	23042958	23043211	-	+	4	6	8	(ac)	14	-	23039992	23039988	CCTT	null	14	-	23043054	23043050	82	3062	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
900	14	34908335	34908667	14	34913470	34913804	-	+	4	4	9	(ac)	14	-	34908564	34908561	CTT	null	14	-	34913572	34913569	100	5008	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
901	14	39451254	39451640	16	68489993	68490320	-	-	32	2	6	(ac)	14	-	39451541	39451540	T	null	16	+	68490217	68490218	85	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
902	14	39452352	39452666	16	68500341	68500676	+	+	32	5	5	(ac)	14	+	39452450	39452454	TTTT	null	16	-	68500477	68500473	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
903	14	50577777	50578144	14	62950760	62951053	-	+	4	9	2	(ac)	14	-	50578051	0	null	null	14	-	62950855	0	97	12372804	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
904	14	54198311	54198565	14	54201863	54202251	-	+	4	6	5	(ac)	14	-	54198466	54198465	A	null	14	-	54201949	54201948	100	3483	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
905	14	55131215	55131493	14	55138171	55138492	-	+	4	6	10	(ac)	14	-	55131397	55131396	C	null	14	-	55138283	55138282	99	6886	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
906	14	56053111	56053549	14	56057249	56057543	+	-	2	4	1	(ac)	14	+	56053218	56053222	TGTT	null	14	+	56057429	56057433	100	4211	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
907	14	61069744	61070080	14	61076250	61076610	-	+	4	2	7	(ac)	14	-	61069970	61069966	TTTC	null	14	-	61076374	61076370	100	6404	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
908	14	62915852	62916253	14	62929248	62929628	-	+	4	6	9	(ac)	14	-	62916148	62916147	C	null	14	-	62929345	62929344	94	13197	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
909	14	63495818	63496185	14	63500814	63501046	-	+	4	5	9	(ac)	14	-	63496089	63496085	CTGT	null	14	-	63500913	63500909	99	4824	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
912	14	66192302	66192672	14	66197823	66198232	-	+	4	5	5	(ac)	14	-	66192553	66192550	TTT	null	14	-	66197944	66197941	99	5391	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
913	14	70319287	70319649	14	70327608	70327971	-	+	4	10	4	(ac)	14	-	70319548	70319546	TT	null	14	-	70327698	70327696	99	8150	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
914	14	74729590	74729877	14	74738970	74739147	-	+	4	8	7	(ac)	14	-	74729779	74729777	TT	null	14	-	74739065	74739063	94	9286	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
915	14	74807447	74807710	14	74811751	74812015	-	+	4	14	6	(ac)	14	-	74807616	74807613	AAT	null	14	-	74811852	74811849	96	4236	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
916	14	78070848	78071122	14	78071722	78072041	+	-	2	12	14	(ac)	14	+	78070940	0	null	null	14	+	78071951	0	99	1011	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
917	14	81577119	81577526	14	81580794	81581090	-	+	4	5	6	(ac)	14	-	81577412	0	null	C	14	-	81580936	0	100	3524	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
918	14	83240114	83240374	14	83244112	83244364	-	+	4	7	7	(ac)	14	-	83240272	83240271	A	null	14	-	83244204	83244203	97	3932	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
919	14	96993079	96993328	14	96993907	96994232	-	+	4	6	9	(ac)	14	-	96993231	0	null	null	14	-	96994002	0	70	771	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
920	14	100792526	100792969	14	100795507	100795802	-	+	4	6	8	(ac)	14	-	100792875	100792874	C	null	14	-	100795614	100795613	100	2739	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
921	14	104492015	104492330	14	104499637	104499931	+	-	2	10	13	(ac)	14	+	104492111	104492113	AG	null	14	+	104499833	104499835	99	7722	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
923	15	34475073	34475376	15	34476866	34477196	+	-	2	7	6	(ac)	15	+	34475197	34475198	A	null	15	+	34477096	34477097	80	1899	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
924	15	36682573	36682956	15	36685720	36686162	-	+	4	6	5	(ac)	15	-	36682845	36682842	TGG	null	15	-	36685819	36685816	98	2974	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
925	15	43476515	43477020	15	43485430	43485834	-	+	4	1	5	(ac)	15	-	43476924	43476921	GTC	null	15	-	43485644	43485641	100	8720	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
927	15	59348510	59348825	15	59351717	59352002	-	+	4	12	6	(ac)	15	-	59348729	59348728	A	null	15	-	59351808	59351807	99	3079	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
928	15	60222385	60222728	15	60225442	60225800	-	+	4	5	5	(ac)	15	-	60222618	60222616	TG	null	15	-	60225542	60225540	99	2924	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
929	15	64487370	64487775	15	64514173	64514555	-	-	8	5	1	(ac)	15	-	64487677	0	null	TT	15	+	64514415	0	85	26738	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
932	15	67480278	67480696	16	52538778	52539189	-	+	32	3	5	(ac)	15	-	67480568	0	null	AGCCAGGCGTGGTAGCACGCACCTGTAG	16	-	52538883	0	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
933	15	69571720	69572050	15	69579942	69580303	-	+	4	11	9	(ac)	15	-	69571923	69571919	TGGG	null	15	-	69580037	69580033	80	8114	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
934	15	73994027	73994389	15	73997281	73997600	-	+	4	10	7	(ac)	15	-	73994300	73994299	T	null	15	-	73997373	73997372	99	3073	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
935	15	76536410	76536696	15	76542964	76543277	-	+	4	10	10	(ac)	15	-	76536598	0	null	null	15	-	76543061	0	99	6463	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
936	15	77235721	77236031	15	77239226	77239583	-	+	4	7	7	(ac)	15	-	77235938	77235937	A	null	15	-	77239327	77239326	99	3389	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
939	15	85816815	85817163	15	85821298	85821542	-	+	4	2	8	(ac)	15	-	85817066	85817064	GC	null	15	-	85821399	85821397	96	4333	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
940	15	86806786	86807131	15	86820143	86820508	-	+	4	4	6	(ac)	15	-	86807030	86807028	CC	null	15	-	86820248	86820246	100	13218	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
941	15	89766971	89767251	15	89787461	89787883	-	+	4	6	6	(ac)	15	-	89767156	89767153	TGC	null	15	-	89787555	89787552	96	20399	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
942	15	94292586	94292871	15	94294347	94294714	-	+	4	5	13	(ac)	15	-	94292769	0	null	null	15	-	94294444	0	100	1675	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
943	15	95882634	95882965	15	95888817	95889321	-	+	4	2	6	(ac)	15	-	95882846	0	null	null	15	-	95888938	0	79	6092	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
944	15	98238016	98238372	15	98241233	98241497	-	+	4	11	5	(ac)	15	-	98238276	0	null	null	15	-	98241351	0	84	3075	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
945	15	98925757	98926118	15	98926697	98927044	-	+	4	7	9	(ac)	15	-	98926031	98926029	TG	null	15	-	98926800	98926798	89	769	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
948	16	572511	572787	16	574734	575080	-	+	4	9	9	(ac)	16	-	572696	572690	GGCTGG	null	16	-	574838	574832	100	2142	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
949	16	839529	839854	16	844957	845334	-	+	4	4	5	(ac)	16	-	839746	839744	CC	null	16	-	845049	845047	98	5303	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
952	16	3278571	3278932	16	3285279	3285718	-	+	4	2	6	(ac)	16	-	3278826	0	null	null	16	-	3285373	0	91	6547	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
953	16	4237999	4238334	16	4242243	4242620	-	+	4	5	5	(ac)	16	-	4238241	4238240	T	null	16	-	4242346	4242345	87	4105	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
954	16	5386035	5386342	16	5393127	5393494	-	+	4	8	8	(ac)	16	-	5386244	0	null	null	16	-	5393251	0	100	7007	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
955	16	7601635	7602104	16	7613068	7613381	-	+	4	2	5	(ac)	16	-	7602008	0	null	null	16	-	7613162	0	99	11154	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
956	16	7914123	7914470	16	7918476	7918828	-	+	4	6	8	(ac)	16	-	7914358	7914357	T	null	16	-	7918577	7918576	97	4219	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
957	16	8165567	8165770	16	8176008	8176343	-	+	4	3	7	(ac)	16	-	8165643	0	null	TATTT	16	-	8176105	0	80	10462	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
958	16	10307058	10307372	16	10396792	10397199	+	-	2	5	5	(ac)	16	+	10307162	10307163	T	null	16	+	10397097	10397098	88	89935	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
959	16	10639757	10640048	16	13307469	13307774	-	+	4	1	6	(ac)	16	-	10639907	10639905	TC	null	16	-	13307576	13307574	99	2667669	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
961	16	14051250	14051592	16	14060923	14061318	-	+	4	7	8	(ac)	16	-	14051494	0	null	null	16	-	14061017	0	93	9523	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
962	16	14537241	14537568	16	14539027	14539459	-	+	4	5	6	(ac)	16	-	14537457	0	null	TTTT	16	-	14539144	0	89	1687	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
964	16	19429012	19429398	16	19437873	19438087	-	+	4	6	6	(ac)	16	-	19429300	19429297	TTT	null	16	-	19438008	19438005	98	8708	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
966	16	23246329	23246654	16	23254045	23254401	-	+	4	3	7	(ac)	16	-	23246563	23246560	TCA	null	16	-	23254166	23254163	100	7603	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
967	16	24278610	24278965	16	24284195	24284595	-	+	4	3	8	(ac)	16	-	24278877	24278874	AGA	null	16	-	24284324	24284321	93	5447	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
968	16	24444406	24444764	16	24460749	24461102	-	+	4	6	6	(ac)	16	-	24444637	24444636	T	null	16	-	24460843	24460842	97	16206	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
970	16	35073155	35073572	16	35076498	35076820	-	+	4	3	4	(ac)	16	-	35073460	0	null	null	16	-	35076616	0	100	3156	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
971	16	35127537	35127909	20	35417954	35418376	-	+	32	4	4	(ac)	16	-	35127797	35127795	GT	null	20	-	35418049	35418047	97	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
972	16	35127993	35128370	20	35408808	35409148	+	-	32	6	4	(ac)	16	+	35128085	35128089	TCCA	null	20	+	35409020	35409024	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
973	16	49443707	49444040	16	49458761	49459049	-	+	4	4	8	(ac)	16	-	49443940	49443938	CA	null	16	-	49458858	49458856	95	14918	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
974	16	50580693	50580983	16	50585756	50586139	-	+	4	10	6	(ac)	16	-	50580874	50580871	TGA	null	16	-	50585852	50585849	100	4978	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
976	16	57958941	57959394	16	57970382	57970745	-	+	4	5	0	(a-)	16	-	57959299	57959297	TG	null	16	-	57970513	57970511	100	11214	1	0	a	bkpt.assoc.cn.change	copy.number.visual.inspection	a	HIGH	red	LATE
977	16	57988676	57989047	16	58030278	58030684	-	+	4	10	2	(ac)	16	-	57988942	57988938	GTGG	null	16	-	58030377	58030373	94	41435	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
982	16	73048784	73049065	16	73054675	73054835	-	+	4	5	7	(ac)	16	-	73048963	0	null	CTCT	16	-	73054767	0	99	5804	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
984	16	85116835	85117242	18	44534474	44534904	-	+	32	7	5	(ac)	16	-	85117139	0	null	null	18	-	44534565	0	93	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
985	16	85121483	85121772	18	44534007	44534440	+	-	32	8	7	(ac)	16	+	85121571	85121574	GTA	null	18	+	44534345	44534348	78	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
986	16	85730642	85731015	16	85732294	85732609	+	+	1	7	5	(ac)	16	+	85730735	85730736	A	null	16	-	85732396	85732395	95	1661	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
987	16	85730438	85730883	16	85730931	85731302	-	-	8	5	3	(ac)	16	-	85730758	0	null	null	16	+	85731205	0	95	447	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
988	16	89946985	89947356	16	89963895	89964267	-	+	4	6	8	(ac)	16	-	89947246	89947244	AA	null	16	-	89963988	89963986	100	16742	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
989	17	4833392	4833667	17	4839736	4839989	-	+	4	11	21	(ac)	17	-	4833574	4833573	C	null	17	-	4839835	4839834	99	6261	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
990	17	6148717	6149105	17	6156280	6156666	-	+	4	0	9	(-c)	17	-	6149010	6149009	A	null	17	-	6156377	6156376	96	7367	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH		
991	17	8967376	8967717	17	9085032	9085375	+	-	2	9	7	(ac)	17	+	8967475	8967478	TTT	null	17	+	9085282	9085285	97	117807	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
993	17	17572278	17572566	17	17592757	17593034	-	+	4	7	11	(ac)	17	-	17572473	17572472	A	null	17	-	17592861	17592860	97	20388	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
994	17	20641502	20641791	17	20661242	20661573	-	+	4	9	8	(ac)	17	-	20641686	20641685	C	null	17	-	20661353	20661352	100	19667	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
995	17	30762950	30763386	17	30766016	30766449	-	+	4	1	6	(ac)	17	-	30763284	30763282	TC	null	17	-	30766110	30766108	100	2826	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
996	17	33064293	33064739	17	33066731	33067099	-	+	4	3	7	(ac)	17	-	33064611	0	null	AA	17	-	33066855	0	98	2244	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
997	17	33181262	33181745	17	33182384	33182864	+	-	2	0	4	(-c)	17	+	33181405	0	null	null	17	+	33182759	0	70	1354	0	1	c	bkpt.assoc.cn.change	copy.number.visual.inspection	c	HIGH	blue	LATE
998	17	39437743	39438258	17	39448284	39448603	+	-	2	4	0	(a-)	17	+	39437835	39437837	CA	null	17	+	39448507	39448509	78	10672	1	0	a	bkpt.assoc.cn.change	copy.number.visual.inspection	a	HIGH	red	LATE
999	17	47335696	47335987	17	47343974	47344376	-	+	4	5	9	(ac)	17	-	47335892	0	null	null	17	-	47344084	0	99	8192	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1001	17	47584077	47584439	17	47590785	47591150	-	+	4	8	5	(ac)	17	-	47584310	0	null	null	17	-	47590878	0	99	6568	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1002	17	56056063	56056447	17	56064552	56064815	-	+	4	5	5	(ac)	17	-	56056340	0	null	null	17	-	56064644	0	99	8304	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1003	17	57096434	57096718	17	57106309	57106589	-	+	4	9	4	(ac)	17	-	57096601	0	null	null	17	-	57106421	0	100	9820	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1004	17	59144077	59144513	17	59145485	59145716	-	+	4	3	9	(ac)	17	-	59144421	59144418	AAA	null	17	-	59145581	59145578	80	1160	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1005	17	60757939	60758307	17	60770195	60770553	-	+	4	8	4	(ac)	17	-	60758215	60758211	GGTG	null	17	-	60770292	60770288	100	12077	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1006	17	61957842	61958108	17	61972160	61972477	-	+	4	15	10	(ac)	17	-	61958012	61958011	T	null	17	-	61972295	61972294	70	14283	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1007	17	70412880	70413219	17	70417768	70418143	-	+	4	11	9	(ac)	17	-	70413118	70413117	A	null	17	-	70417859	70417858	100	4741	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1008	17	73684312	73684584	17	73721607	73721874	-	+	4	15	16	(ac)	17	-	73684487	73684484	GGC	null	17	-	73721701	73721698	98	37214	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1009	17	74717284	74717570	22	30611751	30612059	-	-	32	13	7	(ac)	17	-	74717470	74717467	CTG	null	22	+	30611956	30611959	95	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1010	17	74729154	74729459	22	30612195	30612570	+	+	32	4	9	(ac)	17	+	74729249	0	null	null	22	-	30612286	0	95	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1011	17	79257354	79257750	17	79263959	79264277	-	+	4	14	9	(ac)	17	-	79257654	79257653	C	null	17	-	79264058	79264057	98	6404	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1012	18	681666	681983	18	688346	688703	-	+	4	12	6	(ac)	18	-	681886	681884	AT	null	18	-	688453	688451	99	6567	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1013	18	1077044	1077379	18	1079150	1079564	-	+	4	5	5	(ac)	18	-	1077263	1077261	TC	null	18	-	1079248	1079246	95	1985	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1014	18	1078711	1079135	18	1080102	1080464	-	+	4	1	7	(ac)	18	-	1079022	0	null	null	18	-	1080202	0	83	1180	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1015	18	5063678	5064061	18	5068061	5068394	-	+	4	7	7	(ac)	18	-	5063960	0	null	null	18	-	5068151	0	94	4191	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1016	18	6635276	6635625	X	33629678	33630100	-	+	32	3	6	(ac)	18	-	6635533	6635532	A	null	X	-	33629775	33629774	100	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1018	18	6905860	6906118	18	6930253	6930478	+	-	2	8	20	(ac)	18	+	6905947	6905951	AGAT	null	18	+	6930385	6930389	99	24438	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1021	18	11367957	11368292	18	11382031	11382411	-	+	4	19	16	(ac)	18	-	11368187	11368185	CC	null	18	-	11382127	11382125	99	13940	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1022	18	13189340	13189693	18	13242097	13242392	-	+	4	7	8	(ac)	18	-	13189602	13189601	A	null	18	-	13242221	13242220	99	52619	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1023	18	14069008	14069454	18	14077212	14077518	-	+	4	6	4	(ac)	18	-	14069362	14069359	TTC	null	18	-	14077320	14077317	98	7958	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1024	18	19328809	19329189	18	19337051	19337335	-	+	4	2	6	(ac)	18	-	19329093	0	null	null	18	-	19337189	0	69	8096	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1026	18	26179613	26179944	18	26182039	26182430	-	+	4	5	9	(ac)	18	-	26179855	26179853	AT	null	18	-	26182147	26182145	98	2292	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1028	18	32521629	32521903	18	32526317	32526670	-	+	4	14	13	(ac)	18	-	32521810	32521809	C	null	18	-	32526409	32526408	97	4599	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1029	18	33844197	33844584	18	33856027	33856414	-	+	4	10	10	(ac)	18	-	33844477	0	null	null	18	-	33856126	0	92	11649	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1030	18	36800159	36800514	18	36812294	36812637	-	+	4	5	10	(ac)	18	-	36800414	36800412	TA	null	18	-	36812387	36812385	99	11973	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1031	18	37279009	37279318	18	37280631	37281021	-	+	4	6	5	(ac)	18	-	37279212	37279211	C	null	18	-	37280725	37280724	84	1513	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1033	18	42185543	42185946	18	42188176	42188466	-	+	4	9	11	(ac)	18	-	42185855	42185854	T	null	18	-	42188270	42188269	98	2415	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1035	18	43958198	43958430	18	43968002	43968344	-	+	4	11	6	(ac)	18	-	43958341	43958340	G	null	18	-	43968104	43968103	100	9763	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1036	18	45517388	45517726	18	45520906	45521357	-	+	4	4	6	(ac)	18	-	45517606	45517603	GAG	null	18	-	45521037	45521034	95	3431	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1037	18	46305855	46306269	18	46325280	46325616	-	+	4	5	4	(ac)	18	-	46306145	0	null	null	18	-	46325373	0	96	19228	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1038	18	46786825	46787142	18	46787503	46787840	+	-	2	7	12	(ac)	18	+	46786918	46786920	AT	null	18	+	46787749	46787751	70	831	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1041	18	52596484	52596873	18	52604219	52604605	-	+	4	7	7	(ac)	18	-	52596747	52596744	CAT	null	18	-	52604314	52604311	95	7567	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1042	18	55707380	55707702	18	55719131	55719593	-	+	4	2	7	(ac)	18	-	55707563	55707562	A	null	18	-	55719225	55719224	100	11662	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1043	18	56653911	56654248	18	56663068	56663403	-	+	4	5	12	(ac)	18	-	56654156	56654155	T	null	18	-	56663163	56663162	93	9007	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1044	18	57215844	57216220	21	33882825	33883196	+	-	32	14	13	(ac)	18	+	57215950	57215952	AG	null	21	+	33883095	33883097	90	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1046	18	62852919	62853300	18	62855485	62855806	-	+	4	5	2	(ac)	18	-	62853133	62853131	GT	null	18	-	62855578	62855576	100	2445	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1047	18	75884788	75885166	18	75888705	75889063	-	+	4	4	6	(ac)	18	-	75885052	0	null	null	18	-	75888803	0	95	3751	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1050	19	2745365	2745745	19	2752484	2752921	-	+	4	5	7	(ac)	19	-	2745655	2745652	TGA	null	19	-	2752587	2752584	98	6932	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1051	19	6388615	6389038	19	6392759	6393098	-	+	4	8	11	(ac)	19	-	6388937	6388936	T	null	19	-	6392850	6392849	98	3913	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1053	19	13953486	13953872	19	13962745	13963230	-	+	4	4	0	(a-)	19	-	13953701	13953700	C	null	19	-	13962877	13962876	98	9176	1	1	ac	bkpt.assoc.cn.change	copy.number.visual.inspection	ac	HIGH	grey	EARLY
1054	19	14752278	14752602	19	14761985	14762398	-	+	4	6	4	(ac)	19	-	14752499	14752497	CC	null	19	-	14762085	14762083	96	9586	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1055	19	15739798	15740127	19	15744372	15744775	-	+	4	5	8	(ac)	19	-	15740014	15740013	C	null	19	-	15744475	15744474	95	4461	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1056	19	19936656	19937084	19	19941943	19942297	-	+	4	6	1	(ac)	19	-	19936983	19936981	CT	null	19	-	19942045	19942043	99	5062	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1057	19	22678212	22678540	19	22739159	22739447	+	-	2	4	6	(ac)	19	+	22678306	22678308	AA	null	19	+	22739353	22739355	99	61047	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1058	19	31737316	31737560	19	31737780	31738137	+	-	2	11	8	(ac)	19	+	31737410	0	null	null	19	+	31738042	0	90	632	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1059	19	34727536	34727667	19	34746813	34747246	-	+	4	4	5	(ac)	19	-	34727547	0	null	null	19	-	34746913	0	92	19366	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1060	19	35482170	35482546	19	36333831	36334284	-	+	4	2	6	(ac)	19	-	35482444	0	null	null	19	-	36333969	0	100	851525	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1061	19	36933860	36934159	19	38779373	38779781	-	+	4	4	7	(ac)	19	-	36934049	36934047	TC	null	19	-	38779465	38779463	100	1845416	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1062	19	37909049	37909425	19	37913801	37914161	-	+	4	9	9	(ac)	19	-	37909304	37909301	TTT	null	19	-	37913902	37913899	97	4598	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1063	19	44922932	44923326	19	44934369	44934696	-	+	4	4	8	(ac)	19	-	44923226	44923224	GA	null	19	-	44934469	44934467	100	11243	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1064	19	45516603	45516959	19	45570767	45571074	+	-	2	10	5	(ac)	19	+	45516702	45516705	TGG	null	19	+	45570982	45570985	98	54280	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1065	19	47727670	47728109	19	47730764	47731207	-	+	4	3	6	(ac)	19	-	47727940	0	null	A	19	-	47730856	0	98	2916	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1066	19	47730066	47730379	19	47738715	47739011	-	+	4	5	6	(ac)	19	-	47730286	0	null	null	19	-	47738807	0	99	8521	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1068	19	54701180	54701428	19	54704099	54704473	-	+	4	7	9	(ac)	19	-	54701323	54701321	CC	null	19	-	54704195	54704193	98	2872	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1069	19	56212673	56212939	19	56215953	56216316	-	+	4	11	5	(ac)	19	-	56212850	56212846	ATAC	null	19	-	56216054	56216050	93	3204	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1071	20	2802347	2802663	20	2817621	2817953	-	+	4	5	7	(ac)	20	-	2802567	2802565	GT	null	20	-	2817723	2817721	99	15156	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1072	20	3646843	3647166	20	3649389	3649738	-	+	4	6	2	(ac)	20	-	3647076	3647072	GGCA	null	20	-	3649497	3649493	93	2421	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1073	20	4085913	4086270	20	4845719	4846088	-	+	4	12	6	(ac)	20	-	4086177	4086174	GTC	null	20	-	4845817	4845814	100	759640	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1074	20	6448832	6449149	20	6453437	6453793	-	+	4	10	6	(ac)	20	-	6449048	6449043	AAATT	null	20	-	6453528	6453523	99	4480	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1075	20	11815357	11815686	20	14612135	14612403	-	+	4	1	6	(ac)	20	-	11815572	11815571	A	null	20	-	14612245	14612244	94	2796673	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1076	20	22217182	22217468	20	22226650	22226892	-	+	4	16	15	(ac)	20	-	22217377	22217374	TGG	null	20	-	22226737	22226734	100	9360	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1077	20	24174561	24174858	X	7042576	7042873	+	+	32	11	3	(ac)	20	+	24174653	24174656	TGC	null	X	-	7042681	7042678	98	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1078	20	24448589	24448859	20	24454334	24454642	-	+	4	6	13	(ac)	20	-	24448768	24448766	CA	null	20	-	24454422	24454420	98	5654	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1082	20	37758408	37758793	20	37769426	37769809	-	+	4	7	5	(ac)	20	-	37758699	37758696	CTC	null	20	-	37769539	37769536	100	10840	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1084	20	40100121	40100555	20	40102237	40102517	-	+	4	3	8	(ac)	20	-	40100450	40100449	T	null	20	-	40102337	40102336	100	1887	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1086	20	41119853	41120256	20	41130239	41130685	-	+	4	6	6	(ac)	20	-	41120164	41120160	TAAA	null	20	-	41130343	41130339	99	10179	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1088	20	48144591	48144911	X	40179213	40179514	-	+	32	4	11	(ac)	20	-	48144807	48144806	T	null	X	-	40179318	40179317	99	NA	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1089	20	49847338	49847713	20	49856851	49857092	-	+	4	7	5	(ac)	20	-	49847619	49847617	AG	null	20	-	49856949	49856947	99	9330	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1090	20	54017031	54017450	20	54021146	54021638	-	+	4	0	7	(-c)	20	-	54017349	54017348	T	null	20	-	54021278	54021277	93	3929	0	0	no cn change seen	no.cn.change	copy.number.visual.inspection	c	MEDIUM	blue	NA
1091	20	58998601	58998979	20	59001183	59001475	-	+	4	10	6	(ac)	20	-	58998894	58998891	GAG	null	20	-	59001278	59001275	98	2384	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1093	20	61041485	61041897	20	61045927	61046246	-	+	4	5	7	(ac)	20	-	61041810	61041808	TG	null	20	-	61046042	61046040	99	4232	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1094	20	62132416	62132784	20	62140756	62141128	-	+	4	10	4	(ac)	20	-	62132657	0	null	CTAACCCTAACCCTAACCCTAACCCTAACC	20	-	62140861	0	92	8204	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1095	21	27675894	27676210	21	27676690	27677097	+	-	2	4	7	(ac)	21	+	27675984	27675985	T	null	21	+	27676977	27676978	85	993	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1096	21	35170638	35170952	21	35179648	35179975	-	+	4	8	7	(ac)	21	-	35170860	35170859	A	null	21	-	35179757	35179756	100	8897	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1098	21	43788423	43788860	21	43794676	43795081	-	+	4	4	5	(ac)	21	-	43788756	43788754	AG	null	21	-	43794805	43794803	70	6049	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1099	21	44178189	44178423	21	44190660	44190981	-	+	4	10	19	(ac)	21	-	44178337	44178333	GGAG	null	21	-	44190753	44190749	98	12416	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1101	22	19134313	19134703	22	19155669	19156059	-	+	4	7	6	(ac)	22	-	19134554	19134552	TC	null	22	-	19155791	19155789	100	21237	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1102	22	19429883	19430210	22	19450479	19450853	-	+	4	9	8	(ac)	22	-	19430057	19430056	C	null	22	-	19450582	19450581	100	20525	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1103	22	26787756	26788122	22	26790274	26790762	-	+	4	2	5	(ac)	22	-	26788017	0	null	null	22	-	26790442	0	99	2425	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1105	22	29399433	29399720	22	29410558	29410905	-	+	4	9	5	(ac)	22	-	29399626	0	null	null	22	-	29410648	0	99	11022	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1106	22	35604284	35604619	22	35611208	35611493	-	+	4	7	5	(ac)	22	-	35604527	35604525	TG	null	22	-	35611315	35611313	99	6788	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1107	22	37550696	37551095	22	37556862	37557275	-	+	4	6	3	(ac)	22	-	37550981	37550978	GCC	null	22	-	37556952	37556949	99	5971	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1109	22	40614258	40614644	22	40616773	40617170	-	+	4	4	5	(ac)	22	-	40614525	0	null	null	22	-	40616898	0	73	2373	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1110	22	41829954	41830217	22	41836389	41836678	-	+	4	4	2	(ac)	22	-	41830124	41830123	A	null	22	-	41836484	41836483	90	6360	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1113	X	3239328	3239717	X	3242641	3243035	-	+	4	6	4	(ac)	X	-	3239593	3239590	AAC	null	X	-	3242735	3242732	99	3142	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1114	X	4708315	4708688	X	4718151	4718506	-	+	4	8	12	(ac)	X	-	4708593	4708591	CC	null	X	-	4718273	4718271	99	9680	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1115	X	7282411	7282718	X	7283443	7283760	+	-	2	9	2	(ac)	X	+	7282503	0	null	CTTTGCTTGCCAC	X	+	7283660	0	73	1157	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1117	X	9781918	9782280	X	9783031	9783431	+	-	2	1	6	(ac)	X	+	9782022	9782023	G	null	X	+	9783306	9783307	75	1284	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1118	X	10047283	10047596	X	10051141	10051503	-	+	4	8	7	(ac)	X	-	10047497	0	null	null	X	-	10051255	0	100	3758	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1119	X	14114639	14115048	X	14119026	14119474	-	+	4	1	8	(ac)	X	-	14114954	14114953	C	null	X	-	14119144	14119143	88	4190	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1120	X	14870123	14870592	X	14872786	14873210	+	+	1	4	4	(ac)	X	+	14870218	14870221	TTT	null	X	-	14872895	14872892	95	2677	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1122	X	23773146	23773475	X	23791409	23791759	-	+	4	5	3	(ac)	X	-	23773359	23773354	TGCTG	null	X	-	23791507	23791502	99	18148	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1123	X	27255994	27256357	X	27261256	27261582	-	+	4	3	6	(ac)	X	-	27256226	27256224	CT	null	X	-	27261350	27261348	99	5124	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1124	X	33139949	33140324	X	33141740	33142101	+	-	2	7	6	(ac)	X	+	33140016	0	null	ATTCATTTATGATTAATAATTATGATTAATAATTATGATTCCAAAGGTGCTTAAATCAGCCGGCCATGGTGATT	X	+	33141995	0	88	1979	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1125	X	35346275	35346631	X	35349698	35350044	-	+	4	7	10	(ac)	X	-	35346542	35346541	G	null	X	-	35349792	35349791	100	3250	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1126	X	47044190	47044504	X	47064660	47065065	-	+	4	9	7	(ac)	X	-	47044396	47044394	TC	null	X	-	47064753	47064751	93	20357	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1127	X	47270218	47270553	X	47278544	47278863	-	+	4	7	5	(ac)	X	-	47270460	47270459	G	null	X	-	47278655	47278654	95	8195	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1128	X	50310087	50310373	X	50314008	50314392	-	+	4	5	7	(ac)	X	-	50310256	0	null	ACTGTACCCCAATAACTTATGGA	X	-	50314099	0	99	3843	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1129	X	65529133	65529547	X	65532951	65533345	-	+	4	3	9	(ac)	X	-	65529452	65529451	A	null	X	-	65533072	65533071	95	3620	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1131	X	67475926	67476168	X	67483188	67483465	-	+	4	7	14	(ac)	X	-	67476078	67476077	C	null	X	-	67483286	67483285	97	7208	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1132	X	71755979	71756375	X	71760524	71760902	-	+	4	6	3	(ac)	X	-	71756239	71756238	A	null	X	-	71760616	71760615	100	4377	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1133	X	72751378	72751642	X	72759402	72759700	-	+	4	4	4	(ac)	X	-	72751541	0	null	null	X	-	72759520	0	100	7979	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1135	X	75537053	75537418	X	75542928	75543269	-	+	4	9	8	(ac)	X	-	75537309	75537307	CT	null	X	-	75543025	75543023	100	5716	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1137	X	82547262	82547699	X	82550732	82551168	-	+	4	3	6	(ac)	X	-	82547604	82547602	TG	null	X	-	82550852	82550850	95	3248	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1138	X	94018093	94018434	X	94021348	94021702	-	+	4	2	5	(ac)	X	-	94018328	94018327	A	null	X	-	94021449	94021448	100	3121	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1141	X	100120095	100120345	X	100123316	100123644	-	+	4	8	11	(ac)	X	-	100120251	100120250	T	null	X	-	100123415	100123414	100	3164	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1142	X	100664373	100664661	X	100696978	100697282	+	-	2	11	3	(ac)	X	+	100664463	100664466	TTT	null	X	+	100697164	100697167	100	32701	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1143	X	102440764	102441165	X	102443553	102443828	-	+	4	9	5	(ac)	X	-	102441074	102441072	GA	null	X	-	102443644	102443642	95	2570	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1144	X	111638008	111638165	X	111638468	111638781	+	-	2	5	10	(ac)	X	+	111638111	111638112	T	null	X	+	111638686	111638687	65	575	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1145	X	131166648	131166950	X	131172024	131172384	-	+	4	8	10	(ac)	X	-	131166852	131166846	GAAATT	null	X	-	131172121	131172115	96	5269	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1146	X	152957953	152958332	X	152967758	152968069	-	+	4	10	5	(ac)	X	-	152958241	152958236	CTCTC	null	X	-	152967859	152967854	100	9618	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY
1147	X	153533600	153533937	X	153535708	153536033	-	+	4	11	11	(ac)	X	-	153533842	153533841	A	null	X	-	153535813	153535812	100	1971	NA	NA	NA	not.assessed	NA	ac	HIGH	grey	EARLY