PD14755a	PD14755b	PD14755c	PD14755d	PD14755e	PD14755f	PD14755g	PD14755h	PD14755i	PD14755j	variant	include	regions	notes	exclude
0.827869001	-0.256220897	0.910854295	1.113376332	0.816218913	0.331764275	0.603593663	0.287903697	0.306307537	0.165310377	Amp:8q24.21(MYC)	n	acdegh	"1 het snp, shows deviation, minimal gain over arm level 8q gain"	fij
0.836389901	0.03124612	1.103762679	1.056286265	0.982454083	0.517221761	1.002284587	0.453377099	0.50297353	0.262110739	Amp:8p11.22(FGFR1)	y	acdegh	"no het snps, minimal gain over arm level event in 'h'but assumed low ACF"	fij
-0.075834006	-0.089256816	-0.085101118	0.140024494	-0.096204258	-0.52330075	-0.162313118	-0.118447462	0.063398073	-0.247826168	Del:13q14.2(RB1)	n		fails to normalise	fij
0.066034146	0.03462662	0.062382347	-0.576678529	-0.161337909	-0.17855019	0.025021241	0.12606438	-0.483730895	0.130955993	Del:17q21.31(BRCA1)	n		"noisy, large events called in most noisy samples, no het snps for BAF"	fij
-0.540702561	-0.060746066	-0.411790432	-0.462199189	-0.398048177	-0.148301366	-0.37750936	-0.063995102	-0.176266629	0.035834936	Del:19p13.3(STK11)	n		inconsistent signal in single het snp	fij
-0.035921186	-0.036246332	0.053445815	0.010465229	0.063969263	0.02540011	0.091296375	-0.017620593	-0.019407085	-0.023978276	Gain 1q	n			fij
1.008621389	0.008893634	1.127759957	1.128431409	0.972338994	0.406487375	0.839851692	0.443217332	0.328497421	0.29358487	Gain 8q	y	acdegh	baf consistent	fij
0.454235972	-0.033182209	0.675269011	0.434824154	0.500639341	0.292854916	0.638592023	0.328690041	0.202344195	0.191084654	Loss 8p	n			fij
-0.455314875	0.050364285	-0.518964721	-0.445625875	-0.491215192	-0.126598401	-0.336784944	-0.262212497	-0.069202217	-0.220552819	Loss 16q	y	acdegh	baf consistent	fij
-0.023724218	-0.042467797	-0.05143284	-0.006405677	-0.029769382	-0.059486091	-0.090499092	-0.083650538	0.078242043	-0.131060274	Loss 17p	n