PD14765a	PD14765b	PD14765c	PD14765d	PD14765e	PD14765f	variant	include	regions	notes	exclude
1.451183816	-0.254664481	1.145936422	1.301060658	1.011277524	1.076273952	Amp:8q24.21(MYC)	n	acdef	"no het snps, no amp above arm level gain"	
2.694318743	-0.095648996	2.662433588	3.102011016	2.665585239	3.299430397	Amp:11q13.3(CCND1)	y	acdef	"2 het snps, baf shows deviation"	
-0.574657111	-0.137044214	-0.511427818	-0.412656837	-0.288033194	-0.441607578	Del:1p36.11(ARID1A)	n	"no het snps, doesn't normalise, separation in BAF in general region not clear on plots"		
-0.567769349	-0.092854103	-0.429471137	-0.287111564	-0.31249576	-0.466261355	Del:13q14.2(RB1)	n	acdef	"2 het snps, baf shows deviation"	
-0.689339404	0.046532202	-0.304286321	-0.405160538	-0.238726365	-0.304155445	Del:13q12.3(BRCA2)	n	acdef	"3 het snps, baf shows deviation"	
0.244180695	-0.032746228	0.189247709	0.07473403	0.066018414	0.118645973	Gain 1q	n			
1.637010155	0.022006328	1.433564177	1.19516322	0.913587206	1.274107408	Gain 8q	y	acdef		
-0.362491844	-0.029921452	-0.30805428	-0.340155114	-0.243525913	-0.33109337	Loss 8p	y	acdef		
-0.324042207	0.037588566	-0.313869298	-0.317957299	-0.254113352	-0.299521142	Loss 16q	y	acdef		
0.0400188	-0.024128	0.072036503	-0.067780737	0.037490779	-0.091991144	Loss 17p	n