PD14776a PD14776b PD14776c PD14776d variant include regions notes exclude 0.215118786 0.025295268 0.168068197 0.014190313 Gain 8q n ac very difficult to call as small deviations in logR and BAF with significant noise d -0.219453349 -0.034449863 -0.163863455 -0.138301076 Loss 17p n ac very difficult to call as small deviations in logR and BAF with significant noise d -0.193630513 0.005940434 -0.105153369 -0.083819664 Loss 8p n ac very difficult to call as small deviations in logR and BAF with significant noise d 0.10482626 -0.002651932 0.099992628 -0.292671565 Loss 16q n d 0.001047731 -0.019841879 0.064154756 0.842887675 Amp:11q13.3(CCND1) n only called in a sample where the ACF seems to be unacceptably low and logR is unacceptably noisy d 0.039190907 -0.051331604 0.044563118 -0.072567325 Gain 1q n d