PD9768a	PD9768b	PD9768c	PD9768d	PD9768e	PD9768f	PD9768g	variant	include	regions	notes	exclude_regions
0.096495415	-0.377803732	0.082602976	0.58914135	0.768254313	0.993164262	0.634969454	Amp:8q24.21(MYC)	n		"no baf deviation, suspicious as only 2 het SNPs and only seen in below_average quality LogR"	ad
0.193185142	-0.147073206	0.007311804	-0.057855042	0.697219872	0.989891979	0.320341011	Amp:11q13.3(CCND1)	n	cefg	"baf deviates in all samples, doesn't reach 1.2"	ad
-0.141354286	-0.043589192	-0.266432481	-0.073381412	-0.459968698	-0.690103262	-0.408164046	Del:17q21.31(BRCA1)	n	cefg	baf deviates in all samples	ad
0.129723365	-0.010524336	0.142230244	0.117382788	0.210888833	0.194361204	0.122123465	Gain 1q	n	cefg		ad
0.291309138	0.022737356	0.360720495	0.334303579	0.354325839	0.372816414	0.30302418	Gain 8q	y	cefg		ad
0.183376591	-0.048629883	0.282747983	0.36369817	0.191874435	0.344021896	0.28391206	Loss 8p	n		whole chromosome gain	ad
-0.030136268	0.073022969	0.030583529	-0.049272195	-0.042469777	-0.134816325	-0.059430333	Loss 16q	n			ad
-0.083940383	-0.03515722	0.024307675	-0.07300781	-0.179762043	-0.07395414	-0.041429081	Loss 17p	n			ad
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