PD9851a	PD9851b	PD9851c	PD9851d	PD9851e	PD9851f	PD9851g	PD9851h	PD9851i	variant	include	regions	comments	exclude
0.986771837	-0.003510554	1.081915949	0.144060652	0.126388219	0.564124601	0.806037911	0.8135286	0.725235819	Amp:8q24.21(MYC)	n	acdefghi	<1.2	de
-0.042038521	0.029124457	-0.267763114	0.024966774	-0.067791053	0.153709317	0.042266487	0.194095691	0.005428149	Amp:12q14.1(CDK4)	n		fails to hit th in native DNA	de
2.023974115	-0.107944932	2.011372301	0.360421144	0.238012195	1.396395223	1.763262971	1.865739311	1.691794791	Amp:8p11.22(FGFR1)	y	ac--fghi	de inadequate ACF	de
-0.121074355	0.053502158	-0.66034508	0.005850804	-0.00316635	-0.008759991	0.03510704	0.043958416	-0.034686349	Del:17q21.31(BRCA1)	n		"no het snps, only sig in C where LogR is below average"	de
-0.145738168	-0.338394668	-0.773253669	0.027208979	-0.252398188	-0.229431117	-0.035407991	-0.030868417	-0.208956464	Del:13q12.3(BRCA2)	n		does not normalise in b	de
-0.013579138	-0.018228048	0.038092572	-0.007731835	-0.003886374	0.00185992	-0.012668642	-0.009299967	-0.00577808	Gain 1q	n			de
0.590861522	0.004878217	0.668167882	0.071269297	0.064329266	0.350275315	0.525558089	0.511318989	0.476390641	Gain 8q	y	ac--fghi		de
-0.402070972	0.010339817	-0.202692931	-0.04277359	-0.023509686	-0.210501738	-0.382079008	-0.324877615	-0.27232065	Loss 16q	y	acdefghi		de
-0.447973163	-0.010415987	-0.384974103	-0.058425314	-0.033800777	-0.018390851	-0.076319591	-0.448936838	-0.33553623	Loss 17p	y	ac----hi	only see supportiung BAF data in the noted samples	de
1.256118153	-0.134892395	1.146068929	0.231751556	0.146013719	0.857658604	1.105056597	1.189346679	1.087593026	Loss 8p	n			de