PD9853a	PD9853b	PD9853c	PD9853d	PD9853e	PD9853f	PD9853g	PD9853h	PD9853i	variant	include	regions	notes	exclude
0.933839438	0.026629612	1.067199861	1.303910889	1.259578725	1.119702419	1.217955354	0.895945444	1.126439412	Amp:8q24.21(MYC)	n	acdefghi	"no het snpsbut logR>1.2, BUT no higher than arm level 8q gain"	
1.177269215	-0.037455566	1.555683367	1.548183085	1.323138925	1.361984296	1.410381361	1.304226413	1.331345241	Amp:20q13.2(AURKA)	y	acdefghi	"single het snp, shows high degree of deviation"	
1.758631814	-0.074753009	1.929291563	2.086001845	2.009149432	1.915867601	2.041856157	1.830184917	1.943291842	Amp:8p11.22(FGFR1)	y	acdefghi	no het snps	
-0.43759358	-0.008551165	-0.401044728	-0.601774863	-0.492432703	-0.377745841	-0.354668787	-0.316037074	-0.412669503	Del:1p36.11(ARID1A)	n	acdefghi		
-0.351117145	-0.007828447	-0.633902737	-0.684453451	-0.839673092	-0.408071384	-0.433687157	-0.242626965	-0.553102615	Del:13q14.2(RB1)	n	acdefghi		
-0.452947427	-0.029722345	-0.404847718	-0.604717	-0.851183927	-0.604797908	-0.7077681	-0.505782405	-0.656778535	Del:17q21.31(BRCA1)	n	acdefghi		
-0.326190176	-0.081037291	-0.616091676	-0.732065588	-1.146058479	-0.458714639	-0.612977249	-0.403219001	-0.811767288	Del:13q12.3(BRCA2)	n	acdefghi		
-0.095403817	-0.039585699	0.108489676	0.113430171	0.047008894	0.042717809	0.085093013	0.057197552	0.046227549	Amp:12q14.1(CDK4)	n		does not hit Th in native DNA	
-0.382389238	0.008625096	0.117667194	0.205348771	0.111288234	0.050493491	-0.009342343	-0.027109256	0.082595611	Del:5q11.2(MAP3K1)	n		does not hit Th in native DNA	
0.330327217	-0.015127243	0.107658066	0.135878778	0.358989798	0.163387319	0.197836535	0.189625726	0.283314679	Gain 1q	y	acdefghi		
0.911345251	0.01910399	1.074205562	1.312196985	1.271788802	1.084112341	1.185030932	0.927313068	1.128570908	Gain 8q	y	acdefghi		
-0.43735555	0.038828331	-0.430478139	-0.622982474	-0.52012726	-0.498351159	-0.429335854	-0.280117548	-0.37363927	Loss 16q	y	acdefghi		
0.326443845	0.027500446	0.255170349	0.351158647	0.32133122	0.324892597	0.313444237	0.257526686	0.283589233	Loss 17p	n			
0.855134481	-0.027507104	0.945120397	1.049629975	0.902535366	1.015226794	1.076316381	0.886405751	0.983092595	Loss 8p	n