Normal	Chrom	Pos	Ref	Alt	Gene	Transcript	RNA	CDS	Protein	Type	Effect	CancerGene	Description	DRIVER_CATEGORY	Age	pCR_vs_RD	PreTxTumorSizeClinOrRad	Tumor_size_surgery(cm)	Grade	group	Ki67_biopsy	NumPosLn	ANTHRACYCLINE	TAXANE	geneRef	Mutant_read_count_PD12334a	WT_read_count_PD12334a	DEPTH_PD12334a	MutantPctPD12334a	Mutant_read_count_PD12334c	WT_read_count_PD12334c	DEPTH_PD12334c	MutantPctPD12334c	Mutant_read_count_PD12334d	WT_read_count_PD12334d	DEPTH_PD12334d	MutantPctPD12334d	Mutant_read_count_PD12334e	WT_read_count_PD12334e	DEPTH_PD12334e	MutantPctPD12334e	Mutant_read_count_PD12334f	WT_read_count_PD12334f	DEPTH_PD12334f	MutantPctPD12334f	Mutant_read_count_PD12334g	WT_read_count_PD12334g	DEPTH_PD12334g	MutantPctPD12334g	Mutant_read_count_PD12334h	WT_read_count_PD12334h	DEPTH_PD12334h	MutantPctPD12334h	Mutant_read_count_PD12334i	WT_read_count_PD12334i	DEPTH_PD12334i	MutantPctPD12334i
PD12334b	10	8111547	TA	T	GATA3	CCDS31143.1	r.1605delA	c.1037delA	p.Y346fs*10	Del	frameshift	1	DAMAGING_IN_BCA_GENE	ONCOGENIC	50	pS	2.5	2.5	3	3	40	4	YES	YES	GATA3:p.Y346fs*10	102	166	268	38.0597014925373	76	123	199	38.1909547738693	95	209	304	31.25	80	143	223	35.8744394618834	100	200	300	33.3333333333333	149	287	436	34.1743119266055	94	230	324	29.0123456790123	353	529	882	40.0226757369614