Normal	Chrom	Pos	Ref	Alt	Gene	Transcript	RNA	CDS	Protein	Type	Effect	CancerGene	Description	DRIVER_CATEGORY	Age	pCR_vs_RD	PreTxTumorSizeClinOrRad	Tumor_size_surgery(cm)	Grade	group	Ki67_biopsy	NumPosLn	ANTHRACYCLINE	TAXANE	geneRef	Mutant_read_count_PD12335a	WT_read_count_PD12335a	DEPTH_PD12335a	MutantPctPD12335a	Mutant_read_count_PD12335c	WT_read_count_PD12335c	DEPTH_PD12335c	MutantPctPD12335c	Mutant_read_count_PD12335d	WT_read_count_PD12335d	DEPTH_PD12335d	MutantPctPD12335d	Mutant_read_count_PD12335e	WT_read_count_PD12335e	DEPTH_PD12335e	MutantPctPD12335e	Mutant_read_count_PD12335f	WT_read_count_PD12335f	DEPTH_PD12335f	MutantPctPD12335f	Mutant_read_count_PD12335g	WT_read_count_PD12335g	DEPTH_PD12335g	MutantPctPD12335g	Mutant_read_count_PD12335h	WT_read_count_PD12335h	DEPTH_PD12335h	MutantPctPD12335h	Mutant_read_count_PD12335i	WT_read_count_PD12335i	DEPTH_PD12335i	MutantPctPD12335i
PD12335b	20	52188287	G	GT	ZNF217	CCDS13443.1	r.3568_3569insa	c.3142_3143insA	p.T1048fs*5	Ins	frameshift	3	UNCERTAIN_CANCER_GENE_STATUS_IN_BCA	UNKNOWN	80	pS	4	4	2	2	29	NA	NO	NO	ZNF217:p.T1048fs*5	11	71	82	13.41463415	24	198	222	10.81081081	18	136	154	11.68831169	16	164	180	8.888888889	18	200	218	8.256880734	18	136	154	11.68831169	23	242	265	8.679245283	11	159	170	6.470588235