Normal	Chrom	Pos	Ref	Alt	Gene	Transcript	RNA	CDS	Protein	Type	Effect	CancerGene	Description	DRIVER_CATEGORY	Age	pCR_vs_RD	PreTxTumorSizeClinOrRad	Tumor_size_surgery(cm)	Grade	group	Ki67_biopsy	NumPosLn	ANTHRACYCLINE	TAXANE	geneRef	Mutant_read_count_PD14761a	WT_read_count_PD14761a	DEPTH_PD14761a	MutantPctPD14761a	Mutant_read_count_PD14761c	WT_read_count_PD14761c	DEPTH_PD14761c	MutantPctPD14761c	Mutant_read_count_PD14761d	WT_read_count_PD14761d	DEPTH_PD14761d	MutantPctPD14761d	Mutant_read_count_PD14761e	WT_read_count_PD14761e	DEPTH_PD14761e	MutantPctPD14761e	Mutant_read_count_PD14761f	WT_read_count_PD14761f	DEPTH_PD14761f	MutantPctPD14761f
PD14761b	11	64577330	A	AA	MEN1	CCDS8083.1	r.755_756insu	c.251_252insT	p.I85fs*32	Ins	frameshift	3	UNCERTAIN_CANCER_GENE_STATUS_IN_BCA	POSSIBLE_ONCOGENIC	42	RD	6	6.5	1	3	10	3	YES	YES	MEN1:p.I85fs*32	116	280	396	29.29292929	66	82	148	44.59459459	45	94	139	32.37410072	33	243	276	11.95652174	64	201	265	24.1509434
PD14761b	11	64577329	T	TA	MEN1	CCDS8083.1	r.756_757insu	c.252_253insT	p.I85fs*32	Ins	frameshift	3	UNCERTAIN_CANCER_GENE_STATUS_IN_BCA	POSSIBLE_ONCOGENIC	42	RD	6	6.5	1	3	10	3	YES	YES	MEN1:p.I85fs*32	113	279	392	28.82653061	68	81	149	45.63758389	45	93	138	32.60869565	33	242	275	12	63	196	259	24.32432432