Normal	Chrom	Pos	Ref	Alt	Gene	Transcript	RNA	CDS	Protein	Type	Effect	CancerGene	Description	DRIVER_CATEGORY	Age	pCR_vs_RD	PreTxTumorSizeClinOrRad	Tumor_size_surgery(cm)	Grade	group	Ki67_biopsy	NumPosLn	ANTHRACYCLINE	TAXANE	geneRef	DEPTH_PD14749a	TUM_PILEUP_MUTS_PD14749a	Pileup_MtAlpct_PD14749a	ID.2	DEPTH_PD14749c	TUM_PILEUP_MUTS_PD14749c	Pileup_MtAlpct_PD14749c
PD14749b	1	27099021	C	G	ARID1A	CCDS285.1	r.3808c>g	c.3437C>G	p.T1146S	Sub	missense	1	UNKNOWN_BCA	UNKNOWN	43	RD	6	6	1	3	15	15	YES	YES	ARID1A:p.T1146S	199	83	41.7	1:27099021	100	48	48
PD14749b	17	56435274	C	T	RNF43	CCDS11607.1	r.2351g>a	c.1863G>A	p.E621E	Sub	silent	3	SILENT	SILENT	43	RD	6	6	1	3	15	15	YES	YES	RNF43:p.E621E	317	48	15.1	17:56435274	174	33	19
PD14749b	13	32893435	G	T	BRCA2	CCDS9344.1	r.522g>u	c.289G>T	p.E97*	Sub	nonsense	1	DAMAGING_IN_BCA_GENE	ONCOGENIC	43	RD	6	6	1	3	15	15	YES	YES	BRCA2:p.E97*	64	20	31.2	13:32893435	41	14	34.1