Normal	Chrom	Pos	Ref	Alt	Gene	Transcript	RNA	CDS	Protein	Type	Effect	CancerGene	Description	DRIVER_CATEGORY	Age	pCR_vs_RD	PreTxTumorSizeClinOrRad	Tumor_size_surgery(cm)	Grade	group	Ki67_biopsy	NumPosLn	ANTHRACYCLINE	TAXANE	geneRef	DEPTH_PD14751a	TUM_PILEUP_MUTS_PD14751a	Pileup_MtAlpct_PD14751a	ID.2	DEPTH_PD14751c	TUM_PILEUP_MUTS_PD14751c	Pileup_MtAlpct_PD14751c
PD14751b	13	32945129	C	T	BRCA2	CCDS9344.1	r.8757c>u	c.8524C>T	p.R2842C	Sub	missense	1	ONCOGENIC_BCA_GENE	ONCOGENIC	49	RD	3	0.8	3	1	45	0	YES	YES	BRCA2:p.R2842C	147	115	78.2	13:32945129	181	129	71.3
PD14751b	3	142185192	C	A	ATR	CCDS3124.1	r.6993g>u	c.6871G>T	p.A2291S	Sub	missense	3	UNCERTAIN_CANCER_GENE_STATUS_IN_BCA	UNKNOWN	49	RD	3	0.8	3	1	45	0	YES	YES	ATR:p.A2291S	85	51	60	3:142185192	80	49	61.3
PD14751b	1	162731074	C	T	DDR2	CCDS1241.1	r.1367c>u	c.929C>T	p.A310V	Sub	missense	3	UNCERTAIN_CANCER_GENE_STATUS_IN_BCA	UNKNOWN	49	RD	3	0.8	3	1	45	0	YES	YES	DDR2:p.A310V	263	0	0	1:162731074	381	37	9.7
PD14751b	17	7578406	C	T	TP53	CCDS11118.1	r.714g>a	c.524G>A	p.R175H	Sub	missense	1	CANONICAL_ONCOGENIC_BCA_GENE	ONCOGENIC	49	RD	3	0.8	3	1	45	0	YES	YES	TP53:p.R175H	87	52	59.8	17:7578406	128	87	68