Normal	Chrom	Pos	Ref	Alt	Gene	Transcript	RNA	CDS	Protein	Type	Effect	CancerGene	Description	DRIVER_CATEGORY	Age	pCR_vs_RD	PreTxTumorSizeClinOrRad	Tumor_size_surgery(cm)	Grade	group	Ki67_biopsy	NumPosLn	ANTHRACYCLINE	TAXANE	geneRef	DEPTH_PD14757a	TUM_PILEUP_MUTS_PD14757a	Pileup_MtAlpct_PD14757a	ID.2	DEPTH_PD14757c	TUM_PILEUP_MUTS_PD14757c	Pileup_MtAlpct_PD14757c	ID.3	DEPTH_PD14757d	TUM_PILEUP_MUTS_PD14757d	Pileup_MtAlpct_PD14757d	ID.4	DEPTH_PD14757e	TUM_PILEUP_MUTS_PD14757e	Pileup_MtAlpct_PD14757e	ID.5	DEPTH_PD14757f	TUM_PILEUP_MUTS_PD14757f	Pileup_MtAlpct_PD14757f	ID.6	DEPTH_PD14757g	TUM_PILEUP_MUTS_PD14757g	Pileup_MtAlpct_PD14757g	ID.7	DEPTH_PD14757h	TUM_PILEUP_MUTS_PD14757h	Pileup_MtAlpct_PD14757h	ID.8	DEPTH_PD14757i	TUM_PILEUP_MUTS_PD14757i	Pileup_MtAlpct_PD14757i
PD14757b	2	48027799	C	T	MSH6	CCDS1836.1	r.2829c>u	c.2677C>T	p.L893L	Sub	silent	3	SILENT	SILENT	48	RD	4	5.4	1	3	5	1	YES	YES	MSH6:p.L893L	143	0	0	2:48027799	115	0	0	2:48027799	234	27	11.5	2:48027799	136	16	11.8	2:48027799	178	3	1.7	2:48027799	103	4	3.9	2:48027799	53	5	9.4	2:48027799	101	9	8.9
PD14757b	X	70346843	G	T	MED12	CCDS43970.1	r.2742g>u	c.2710G>T	p.E904*	Sub	nonsense	2	DAMAGING_OTHER_GENE	ONCOGENIC	48	RD	4	5.4	1	3	5	1	YES	YES	MED12:p.E904*	90	0	0	X:70346843	66	5	7.6	X:70346843	168	0	0	X:70346843	71	0	0	X:70346843	160	0	0	X:70346843	96	0	0	X:70346843	42	0	0	X:70346843	60	0	0