Normal	Chrom	Pos	Ref	Alt	Gene	Transcript	RNA	CDS	Protein	Type	Effect	CancerGene	Description	DRIVER_CATEGORY	Age	pCR_vs_RD	PreTxTumorSizeClinOrRad	Tumor_size_surgery(cm)	Grade	group	Ki67_biopsy	NumPosLn	ANTHRACYCLINE	TAXANE	geneRef	DEPTH_PD14761a	TUM_PILEUP_MUTS_PD14761a	Pileup_MtAlpct_PD14761a	ID.2	DEPTH_PD14761c	TUM_PILEUP_MUTS_PD14761c	Pileup_MtAlpct_PD14761c	ID.3	DEPTH_PD14761d	TUM_PILEUP_MUTS_PD14761d	Pileup_MtAlpct_PD14761d	ID.4	DEPTH_PD14761e	TUM_PILEUP_MUTS_PD14761e	Pileup_MtAlpct_PD14761e	ID.5	DEPTH_PD14761f	TUM_PILEUP_MUTS_PD14761f	Pileup_MtAlpct_PD14761f
PD14761b	18	19751612	C	T	GATA6	CCDS11872.1	r.784c>u	c.507C>T	p.F169F	Sub	silent	3	SILENT	SILENT	42	RD	6	6.5	1	3	10	3	YES	YES	GATA6:p.F169F	558	48	8.6	18:19751612	202	26	12.9	18:19751612	194	23	11.9	18:19751612	297	24	8.1	18:19751612	385	33	8.6
PD14761b	19	7174635	G	A	INSR	CCDS12176.1	r.1191c>u	c.1082C>T	p.T361I	Sub	missense	3	UNCERTAIN_CANCER_GENE_STATUS_IN_BCA	UNKNOWN	42	RD	6	6.5	1	3	10	3	YES	YES	INSR:p.T361I	311	30	9.6	19:7174635	197	26	13.2	19:7174635	150	17	11.3	19:7174635	279	13	4.7	19:7174635	320	43	13.4
PD14761b	3	178936091	G	A	PIK3CA	CCDS43171.1	r.1790g>a	c.1633G>A	p.E545K	Sub	missense	1	CANONICAL_ONCOGENIC_BCA_GENE	ONCOGENIC	42	RD	6	6.5	1	3	10	3	YES	YES	PIK3CA:p.E545K	66	15	22.7	3:178936091	199	51	25.6	3:178936091	92	19	20.7	3:178936091	221	26	11.8	3:178936091	204	25	12.3