ID_VARIANT FLAGGING_VERSION NORMAL_NAME VARIANT_TYPE ACCESSION MIN_POSITION MAX_POSITION LENGTH CHANGE SUM_MS S1 S2 DEFAULT_ANNOT DELET_ANNOT REPEATS RANGE_START RANGE_END P_MT_POS P_MT_NEG P_WT_POS P_WT_NEG B_MT_POS B_MT_NEG B_WT_POS B_WT_NEG D_MT_POS D_MT_NEG D_WT_POS D_WT_NEG RD_MT_POS RD_MT_NEG RD_WT_POS RD_WT_NEG UC_MT_POS UC_MT_NEG UC_WT_POS UC_WT_NEG Calls.In.8..Reads.Bt.Depth.10.And.200 Calls.In.4..Reads.Lt.Depth.200 Short.Call.Lt.9.Repeats Not.In.Normal.Panel Germ.Line Small.and.Deep.Enough No.Wild.Type.Calls Verify.Indel.Condition BIDIRECTIONAL Previously_Called_Category CONFIDENCE_GROUP Coding G_BROWSE Mutant_read_count_PD9777a WT_read_count_PD9777a DEPTH_PD9777a MutantPctPD9777a ID_VARIANT.3 Mutant_read_count_PD9777c WT_read_count_PD9777c DEPTH_PD9777c MutantPctPD9777c ID_VARIANT.4 Mutant_read_count_PD9777d WT_read_count_PD9777d DEPTH_PD9777d MutantPctPD9777d DP.cluster 568747082 V|2.17.7|04_01_13 PD9777b D 12 110655907 110655907 1 c 434 25 431.3089905 IFT81|CCDS41831.1|r.2455delC|c.1907delC|p.A636fs*10 IFT81|CCDS41831.1|r.2455delC|c.1907delC|p.A636fs*10 1 110655906 110655908 4 4 0 0 7 4 0 0 30 28 17 18 30 28 17 18 7 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF CODING HIGH_CONF 3 29 32 9.375 568747082 8 28 36 22.22222222 568747082 11 41 52 21.15384615 2 568489869 V|2.17.7|04_01_13 PD9777b D 17 27493881 27493889 9 ctccttttt 203 20 378.0620117 MYO18A|CCDS45642.1|r.70_78delAAAAAGGAG|c.70_78delAAAAAGGAG|p.K24_E26delKKE MYO18A|CCDS45642.1|r.70_78delAAAAAGGAG|c.70_78delAAAAAGGAG|p.K24_E26delKKE 2 27493880 27493905 4 3 0 0 4 4 0 0 37 23 14 15 37 23 14 15 4 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF CODING HIGH_CONF 3 29 32 9.375 568489869 3 14 17 17.64705882 568489869 15 40 55 27.27272727 2 568584749 V|2.17.7|04_01_13 PD9777b D 17 7577137 7577137 1 c 540 28 490.0589905 TP53|CCDS11118.1|r.991delG|c.801delG|p.N268fs*77 TP53|CCDS11118.1|r.991delG|c.801delG|p.N268fs*77 2 7577136 7577139 3 6 0 0 8 7 0 0 22 17 7 20 22 17 7 20 8 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF CODING HIGH_CONF 5 18 23 21.73913043 568584749 2 10 12 16.66666667 568584749 16 20 36 44.44444444 2 565927548 V|2.17.7|04_01_13 PD9777b D 3 164447153 164447153 1 a 269 10 270.0780029 None None 9 164447152 164447162 4 1 0 0 7 1 0 0 27 22 26 17 27 22 26 17 7 1 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 33 37 10.81081081 565927548 8 42 50 16 565927548 20 54 74 27.02702703 2 565928543 V|2.17.7|04_01_13 PD9777b D 3 172554433 172554433 1 c 360 15 324.0939941 None None 5 172554432 172554438 2 4 0 0 2 6 0 0 20 28 13 17 20 28 13 17 2 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 34 42 19.04761905 565928543 8 44 52 15.38461538 565928543 19 66 85 22.35294118 2 565932823 V|2.17.7|04_01_13 PD9777b I 3 97455637 97455638 1 A 269 6 266.4660034 None None 9 97455628 97455638 0 5 0 0 3 5 0 0 25 29 18 15 25 29 18 15 3 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 30 37 18.91891892 565932823 8 39 47 17.0212766 565932823 19 34 53 35.8490566 3 565938960 V|2.17.7|04_01_13 PD9777b I 3 156526699 156526700 1 T 360 7 320.4819946 None None 8 156526691 156526700 0 6 0 0 4 8 0 0 27 31 18 12 28 31 18 12 4 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 26 32 18.75 565938960 12 36 48 25 565938960 11 65 76 14.47368421 2 565941392 V|2.17.7|04_01_13 PD9777b I 3 177442900 177442901 1 A 360 7 320.4819946 None None 8 177442892 177442901 0 6 0 0 1 9 0 0 22 36 15 20 22 36 15 20 1 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 38 43 11.62790698 565941392 12 43 55 21.81818182 565941392 25 67 92 27.17391304 3 565941494 V|2.17.7|04_01_13 PD9777b I 3 178479549 178479550 1 A 486 10 480.7229919 None None 8 178479541 178479550 0 9 0 0 2 11 0 0 4 36 21 19 4 36 21 19 2 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 12 27 39 30.76923077 565941494 12 20 32 37.5 565941494 46 41 87 52.87356322 3 565944943 V|2.17.7|04_01_13 PD9777b D 9 9458401 9458401 1 a 420 18 380.098999 None None 9 9458400 9458410 5 2 0 0 5 3 0 0 23 22 17 18 23 22 17 18 5 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 9 44 53 16.98113208 565944943 8 43 51 15.68627451 565944943 28 96 124 22.58064516 3 565949949 V|2.17.7|04_01_13 PD9777b I 9 4873956 4873957 1 C 420 8 376.4859924 None None 6 4873956 4873963 7 0 0 0 10 3 0 0 46 20 14 24 46 20 14 24 10 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 57 63 9.523809524 565949949 13 59 72 18.05555556 565949949 31 158 189 16.4021164 3 565952597 V|2.17.7|04_01_13 PD9777b I 9 28669304 28669305 1 T 360 7 322.7030029 None None 8 28669304 28669313 6 0 0 0 8 4 0 0 19 22 9 15 19 23 10 15 8 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 27 30 10 565952597 12 35 47 25.53191489 565952597 19 49 68 27.94117647 2 565961314 V|2.17.7|04_01_13 PD9777b I 20 53300559 53300560 1 T 360 7 323.2709961 None None 6 53300553 53300560 0 6 0 0 4 7 0 0 22 24 18 18 22 25 18 18 4 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 27 33 18.18181818 565961314 10 31 41 24.3902439 565961314 48 39 87 55.17241379 3 565967992 V|2.17.7|04_01_13 PD9777b D 8 43494565 43494566 2 tt 540 30 489.4869995 None None 5 43494564 43494570 5 4 0 0 5 4 0 0 22 25 16 17 22 25 16 17 5 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 9 27 36 25 565967992 18 35 53 33.96226415 565967992 19 61 80 23.75 3 565993225 V|2.17.7|04_01_13 PD9777b D 4 16708763 16708763 1 a 360 16 325.9159851 None None 8 16708762 16708771 3 3 0 0 5 4 0 0 12 13 20 17 12 13 20 17 5 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 27 30 10 565993225 9 25 34 26.47058824 565993225 26 51 77 33.76623377 2 566004678 V|2.17.7|04_01_13 PD9777b D 11 60351536 60351539 4 aaag 298 15 324.8380127 None None 1 60351535 60351541 4 2 0 0 8 2 0 0 23 17 23 18 23 17 23 18 8 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 21 25 16 566004678 10 26 36 27.77777778 566004678 31 17 48 64.58333333 3 566053794 V|2.17.7|04_01_13 PD9777b D 5 66146670 66146671 2 ag 300 10 269.3580017 None None 2 66146669 66146674 1 4 0 0 2 6 0 0 13 20 14 21 13 20 14 21 2 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 24 29 17.24137931 566053794 8 23 31 25.80645161 566053794 20 18 38 52.63157895 3 566061130 V|2.17.7|04_01_13 PD9777b D 5 136337641 136337641 1 g 329 15 323.9519959 None None 1 136337640 136337642 4 2 0 0 5 3 0 0 18 20 20 22 18 20 20 22 5 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 19 22 13.63636364 566061130 7 26 33 21.21212121 566061130 17 27 44 38.63636364 2 566066489 V|2.17.7|04_01_13 PD9777b DI 5 154719136 154719139 4 AT 238 12 0 None None 0 154719136 154719139 2 3 0 0 0 0 0 0 20 22 16 25 20 22 16 25 2 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 21 25 16 566066489 6 30 36 16.66666667 566066489 22 27 49 44.89795918 2 566079076 V|2.17.7|04_01_13 PD9777b D 21 14710149 14710149 1 c 217 12 272.3280029 None None 3 14710148 14710152 2 3 0 0 2 3 0 0 16 22 17 15 16 22 17 15 2 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 15 17 11.76470588 566079076 3 32 35 8.571428571 566079076 10 48 58 17.24137931 2 566082350 V|2.17.7|04_01_13 PD9777b D 21 37495785 37495786 2 ct 300 12 272.3280029 None None 3 37495784 37495791 3 2 0 0 4 3 0 0 17 22 18 14 17 22 18 14 4 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 21 24 12.5 566082350 6 27 33 18.18181818 566082350 16 29 45 35.55555556 3 566096627 V|2.17.7|04_01_13 PD9777b D 2 163082999 163082999 1 a 360 15 323.2789917 None None 8 163082998 163083007 2 4 0 0 2 6 0 0 18 23 18 15 18 23 18 15 2 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 27 28 3.571428571 566096627 9 38 47 19.14893617 566096627 22 59 81 27.16049383 2 566098522 V|2.17.7|04_01_13 PD9777b D 2 177670495 177670495 1 t 300 12 269.3989868 None None 9 177670494 177670504 3 2 0 0 3 4 0 0 15 18 22 19 15 18 22 19 3 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 34 37 8.108108108 566098522 8 29 37 21.62162162 566098522 17 59 76 22.36842105 2 566098866 V|2.17.7|04_01_13 PD9777b D 2 180302156 180302156 1 t 420 18 377.1589966 None None 3 180302155 180302159 2 5 0 0 2 5 0 0 22 23 11 21 22 23 11 21 2 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 24 29 17.24137931 566098866 7 36 43 16.27906977 566098866 26 35 61 42.62295082 3 566100038 V|2.17.7|04_01_13 PD9777b D 2 189296022 189296022 1 a 420 20 377.1589966 None None 9 189296021 189296031 4 3 0 0 4 3 0 0 24 16 13 21 24 16 13 21 4 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 24 26 7.692307692 566100038 9 36 45 20 566100038 15 57 72 20.83333333 2 566127843 V|2.17.7|04_01_13 PD9777b D 15 54582006 54582006 1 a 300 10 270.6610107 None None 9 54582005 54582015 1 4 0 0 2 6 0 0 22 26 14 10 22 26 14 10 2 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 26 28 7.142857143 566127843 10 40 50 20 566127843 16 52 68 23.52941176 2 566128829 V|2.17.7|04_01_13 PD9777b D 15 60986135 60986135 1 a 300 12 270.6610107 None None 6 60986134 60986141 3 2 0 0 3 3 0 0 17 16 17 16 17 16 17 16 3 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 32 40 20 566128829 6 33 39 15.38461538 566128829 21 61 82 25.6097561 2 566134194 V|2.17.7|04_01_13 PD9777b DI 15 26647108 26647111 4 CCA 418 21 0 None None 0 26647108 26647111 6 2 0 0 0 0 0 0 21 17 17 20 21 17 17 20 6 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 20 24 16.66666667 566134194 10 23 33 30.3030303 566134194 12 25 37 32.43243243 2 566149583 V|2.17.7|04_01_13 PD9777b D 8 48418611 48418614 4 cttt 298 16 324.1619873 None None 1 48418610 48418617 3 3 0 0 4 3 0 0 12 28 19 16 12 28 19 16 4 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 29 34 14.70588235 566149583 8 29 37 21.62162162 566149583 15 63 78 19.23076923 2 566152209 V|2.17.7|04_01_13 PD9777b D 8 71990794 71990794 1 t 420 20 378.1889954 None None 9 71990793 71990803 4 3 0 0 5 4 0 0 26 24 19 11 26 24 19 11 5 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 33 40 17.5 566152209 8 46 54 14.81481481 566152209 10 66 76 13.15789474 2 566153474 V|2.17.7|04_01_13 PD9777b D 8 82994545 82994545 1 a 600 36 540.2709961 None None 7 82994544 82994552 5 5 0 0 8 5 0 0 23 23 18 21 23 23 18 21 8 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 10 43 53 18.86792453 566153474 13 40 53 24.52830189 566153474 34 82 116 29.31034483 3 566155207 V|2.17.7|04_01_13 PD9777b D 8 98144326 98144328 3 ctt 757 50 702.3519897 None None 2 98144325 98144334 4 9 0 0 4 13 0 0 28 28 14 16 28 28 14 16 4 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 12 35 47 25.53191489 566155207 18 36 54 33.33333333 566155207 62 54 116 53.44827586 2 566156957 V|2.17.7|04_01_13 PD9777b D 8 112870904 112870904 1 g 269 10 270.1350098 None None 2 112870903 112870906 4 1 0 0 5 3 0 0 23 9 22 22 23 9 22 22 5 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 30 34 11.76470588 566156957 7 22 29 24.13793103 566156957 22 76 98 22.44897959 3 566162320 V|2.17.7|04_01_13 PD9777b I 8 53856778 53856779 1 A 300 6 267.125 None None 7 53856778 53856786 5 0 0 0 6 4 0 0 31 30 19 16 33 30 19 16 6 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 30 34 11.76470588 566162320 9 50 59 15.25423729 566162320 26 82 108 24.07407407 2 566170019 V|2.17.7|04_01_13 PD9777b I 8 131297578 131297579 1 A 300 6 266.5230103 None None 9 131297569 131297579 0 5 0 0 5 7 0 0 28 22 18 11 28 22 18 11 5 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 11 29 40 27.5 566170019 16 29 45 35.55555556 566170019 61 35 96 63.54166667 2 566185513 V|2.17.7|04_01_13 PD9777b D 16 16174018 16174019 2 tg 360 16 326.5289917 None None 2 16174017 16174023 3 3 0 0 3 3 0 0 20 10 15 15 20 10 15 15 3 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 20 23 13.04347826 566185513 7 20 27 25.92592593 566185513 11 53 64 17.1875 2 566197583 V|2.17.7|04_01_13 PD9777b D 1 173216554 173216554 1 t 480 24 431.7250061 None None 8 173216553 173216562 3 5 0 0 4 7 0 0 20 18 21 17 20 18 21 17 4 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 32 36 11.11111111 566197583 11 38 49 22.44897959 566197583 25 88 113 22.12389381 2 566222543 V|2.17.7|04_01_13 PD9777b D 20 10482055 10482056 2 ag 300 10 272.8429871 None None 1 10482054 10482057 4 1 0 0 8 2 0 0 16 21 23 13 16 21 23 13 8 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 22 28 21.42857143 566222543 12 22 34 35.29411765 566222543 39 31 70 55.71428571 3 566226834 V|2.17.7|04_01_13 PD9777b I 20 15186866 15186867 1 A 329 7 323.7990112 None None 8 15186858 15186867 0 6 0 0 4 9 0 0 23 22 20 17 23 22 20 17 4 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 17 22 22.72727273 566226834 16 21 37 43.24324324 566226834 43 45 88 48.86363636 3 566231863 V|2.17.7|04_01_13 PD9777b D 7 85579948 85579951 4 tctc 480 24 432.0840149 None None 4 85579947 85579956 3 5 0 0 3 6 0 0 18 12 14 13 18 12 14 13 3 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 23 27 14.81481481 566231863 10 17 27 37.03703704 566231863 13 51 64 20.3125 2 566233001 V|2.17.7|04_01_13 PD9777b D 7 96349508 96349508 1 c 720 49 648.1259766 None None 2 96349507 96349510 6 6 0 0 6 7 0 0 25 23 11 24 25 23 11 24 6 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 32 37 13.51351351 566233001 13 33 46 28.26086957 566233001 15 42 57 26.31578947 2 566234824 V|2.17.7|04_01_13 PD9777b D 7 111491869 111491872 4 gtaa 306 12 324.0629883 None None 1 111491868 111491875 1 5 0 0 1 6 0 0 12 22 10 13 12 22 10 13 1 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 22 26 15.38461538 566234824 6 24 30 20 566234824 24 47 71 33.8028169 3 566254683 V|2.17.7|04_01_13 PD9777b D 11 19174971 19174971 1 a 360 16 325.4710083 None None 2 19174970 19174973 3 3 0 0 3 3 0 0 23 21 18 19 23 21 18 19 3 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 29 33 12.12121212 566254683 6 35 41 14.63414634 566254683 21 48 69 30.43478261 3 566259146 V|2.17.7|04_01_13 PD9777b D 11 49392081 49392084 4 tctt 389 18 379.7170105 None None 1 49392080 49392087 2 5 0 0 3 5 0 0 26 28 16 19 26 28 16 19 3 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 33 35 5.714285714 566259146 10 41 51 19.60784314 566259146 19 32 51 37.25490196 2 566291603 V|2.17.7|04_01_13 PD9777b I 1 104363979 104363980 1 A 300 6 266.3510132 None None 9 104363979 104363989 5 0 0 0 7 2 0 0 38 24 20 19 38 24 20 19 7 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 36 40 10 566291603 9 52 61 14.75409836 566291603 16 47 63 25.3968254 2 566294986 V|2.17.7|04_01_13 PD9777b D 16 58975010 58975010 1 t 329 15 326.0409851 None None 9 58975009 58975019 4 2 0 0 4 2 0 0 24 12 18 14 24 12 18 14 4 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 35 41 14.63414634 566294986 5 34 39 12.82051282 566294986 20 59 79 25.3164557 2 566302544 V|2.17.7|04_01_13 PD9777b I 16 78327024 78327025 1 C 300 6 268.6910095 None None 1 78327023 78327025 0 5 0 0 2 7 0 0 24 28 18 15 24 28 18 15 2 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 26 29 10.34482759 566302544 9 38 47 19.14893617 566302544 50 42 92 54.34782609 3 566342300 V|2.17.7|04_01_13 PD9777b D X 115675533 115675533 1 t 277 12 271.0960083 None None 9 115675532 115675542 3 2 0 0 3 2 0 0 12 17 15 20 12 17 15 20 3 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 23 24 4.166666667 566342300 3 22 25 12 566342300 15 38 53 28.30188679 2 566357578 V|2.17.7|04_01_13 PD9777b D 17 69437748 69437748 1 c 360 15 325.6669922 None None 3 69437747 69437751 2 4 0 0 2 4 0 0 35 16 15 13 35 16 15 13 2 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 27 34 20.58823529 566357578 6 39 45 13.33333333 566357578 19 47 66 28.78787879 2 566383363 V|2.17.7|04_01_13 PD9777b D 12 21148825 21148825 1 t 360 16 326.3739929 None None 7 21148824 21148832 3 3 0 0 5 3 0 0 27 18 16 21 27 18 16 21 5 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 42 44 4.545454545 566383363 8 39 47 17.0212766 566383363 10 60 70 14.28571429 2 566386192 V|2.17.7|04_01_13 PD9777b I 12 4679754 4679755 1 A 480 9 430.348999 None None 7 4679754 4679762 8 0 0 0 13 6 0 0 25 30 11 20 25 30 11 21 13 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 15 33 48 31.25 566386192 19 46 65 29.23076923 566386192 82 123 205 40 2 566396094 V|2.17.7|04_01_13 PD9777b D 5 40968049 40968049 1 c 420 14 380.3890076 None None 1 40968048 40968050 6 1 0 0 9 2 0 0 18 11 19 14 18 11 19 14 9 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 26 31 16.12903226 566396094 10 16 26 38.46153846 566396094 41 25 66 62.12121212 3 566396415 V|2.17.7|04_01_13 PD9777b D 5 43697194 43697197 4 tgtc 420 20 380.3890076 None None 1 43697193 43697198 3 4 0 0 3 4 0 0 14 13 12 21 14 13 12 21 3 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 20 26 23.07692308 566396415 8 15 23 34.7826087 566396415 42 21 63 66.66666667 3 566399142 V|2.17.7|04_01_13 PD9777b I 5 18382751 18382752 1 A 360 7 321.8330078 None None 6 18382745 18382752 0 6 0 0 7 9 0 0 13 25 17 16 13 25 17 16 7 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 27 30 10 566399142 17 15 32 53.125 566399142 49 31 80 61.25 2 566400316 V|2.17.7|04_01_13 PD9777b I 5 26434433 26434434 1 A 300 12 268.6960144 None None 0 26434433 26434434 2 3 0 0 3 4 0 0 20 12 23 11 20 12 23 11 3 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 26 27 3.703703704 566400316 7 21 28 25 566400316 14 41 55 25.45454545 NA 566408228 V|2.17.7|04_01_13 PD9777b D 3 6815450 6815450 1 g 360 15 324.6659851 None None 1 6815449 6815451 4 2 0 0 4 3 0 0 15 12 21 16 15 12 21 16 4 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 10 21 31 32.25806452 566408228 6 18 24 25 566408228 25 18 43 58.13953488 3 566428632 V|2.17.7|04_01_13 PD9777b D 18 25086478 25086478 1 a 420 20 379.8370056 None None 3 25086477 25086481 3 4 0 0 3 4 0 0 21 21 18 19 21 21 18 19 3 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 38 39 2.564102564 566428632 7 31 38 18.42105263 566428632 20 23 43 46.51162791 2 566428673 V|2.17.7|04_01_13 PD9777b D 18 25518679 25518679 1 t 360 15 324.9719849 None None 8 25518678 25518687 2 4 0 0 3 4 0 0 11 14 19 8 11 14 19 8 3 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 10 32 42 23.80952381 566428673 7 20 27 25.92592593 566428673 21 43 64 32.8125 2 566451047 V|2.17.7|04_01_13 PD9777b D 19 8557529 8557530 2 ac 300 12 272.6929932 None None 1 8557528 8557532 2 3 0 0 2 3 0 0 8 15 12 24 8 15 12 24 2 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 34 37 8.108108108 566451047 5 17 22 22.72727273 566451047 21 67 88 23.86363636 2 566453351 V|2.17.7|04_01_13 PD9777b D 19 22984371 22984374 4 tgtc 389 14 381.7709961 None None 1 22984370 22984377 1 6 0 0 2 8 0 0 15 26 11 28 15 26 11 28 2 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 18 25 28 566453351 10 29 39 25.64102564 566453351 39 45 84 46.42857143 3 566459768 V|2.17.7|04_01_13 PD9777b D 12 60810310 60810310 1 t 420 18 378.4349976 None None 8 60810309 60810318 2 5 0 0 2 5 0 0 19 22 16 18 19 22 16 18 2 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 21 24 12.5 566459768 7 40 47 14.89361702 566459768 13 46 59 22.03389831 2 566491885 V|2.17.7|04_01_13 PD9777b D 13 106363718 106363718 1 t 300 10 270.1520081 None None 7 106363717 106363725 4 1 0 0 6 5 0 0 28 23 31 9 28 23 31 9 6 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 46 48 4.166666667 566491885 11 35 46 23.91304348 566491885 17 56 73 23.28767123 2 566502964 V|2.17.7|04_01_13 PD9777b I 13 94798259 94798260 1 A 300 6 267.1419983 None None 4 94798255 94798260 0 5 0 0 1 5 0 0 18 31 17 16 18 31 17 17 1 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 30 34 11.76470588 566502964 6 37 43 13.95348837 566502964 20 73 93 21.50537634 2 566508103 V|2.17.7|04_01_13 PD9777b D 4 70412453 70412453 1 a 420 18 377.2720032 None None 1 70412452 70412454 5 2 0 0 6 2 0 0 21 23 20 22 21 23 20 22 6 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 26 34 23.52941176 566508103 8 35 43 18.60465116 566508103 23 48 71 32.3943662 3 566513467 V|2.17.7|04_01_13 PD9777b D 4 116020904 116020904 1 a 420 20 377.2720032 None None 2 116020903 116020906 4 3 0 0 5 4 0 0 19 17 16 19 19 17 16 19 5 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 27 28 3.571428571 566513467 9 24 33 27.27272727 566513467 15 15 30 50 2 566541173 V|2.17.7|04_01_13 PD9777b D 6 66650542 66650542 1 t 360 16 323.9849854 None None 4 66650541 66650546 3 3 0 0 4 3 0 0 17 26 12 20 17 26 12 20 4 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 25 29 13.79310345 566541173 6 33 39 15.38461538 566541173 23 36 59 38.98305085 3 566541269 V|2.17.7|04_01_13 PD9777b D 6 67261095 67261106 12 gagcagatgctg 203 20 377.9819946 None None 1 67261094 67261110 4 3 0 0 4 3 0 0 21 27 12 12 21 27 12 12 4 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 20 25 20 566541269 8 32 40 20 566541269 10 33 43 23.25581395 2 566544419 V|2.17.7|04_01_13 PD9777b D 6 92206312 92206312 1 a 300 10 269.9869995 None None 3 92206311 92206315 1 4 0 0 3 6 0 0 19 25 15 15 19 25 15 15 3 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 20 23 13.04347826 566544419 8 32 40 20 566544419 28 45 73 38.35616438 3 566547650 V|2.17.7|04_01_13 PD9777b D 6 118004488 118004488 1 c 480 21 431.980011 None None 2 118004487 118004490 6 2 0 0 7 5 0 0 18 16 17 9 18 16 17 9 7 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 15 21 28.57142857 566547650 11 20 31 35.48387097 566547650 27 35 62 43.5483871 3 566551840 V|2.17.7|04_01_13 PD9777b D 6 153710797 153710797 1 a 300 12 269.9869995 None None 9 153710796 153710806 3 2 0 0 3 3 0 0 24 31 18 16 24 31 18 16 3 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 31 33 6.060606061 566551840 5 50 55 9.090909091 566551840 17 63 80 21.25 2 566562208 V|2.17.7|04_01_13 PD9777b I 6 129739681 129739682 1 T 660 12 587.3499756 None None 3 129739681 129739685 11 0 0 0 14 14 0 0 33 33 22 24 33 33 22 25 14 14 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 20 45 65 30.76923077 566562208 28 53 81 34.56790123 566562208 87 115 202 43.06930693 2 566566577 V|2.17.7|04_01_13 PD9777b D 2 325508 325517 10 tgatctgttg 290 36 540.5430298 None None 1 325507 325519 5 5 0 0 5 6 0 0 20 24 12 18 20 24 12 18 5 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 26 29 10.34482759 566566577 13 28 41 31.70731707 566566577 12 46 58 20.68965517 2 566567374 V|2.17.7|04_01_13 PD9777b D 2 6190958 6190958 1 t 300 12 270.2709961 None None 1 6190957 6190959 2 3 0 0 3 3 0 0 19 16 15 10 19 16 15 10 3 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 20 26 23.07692308 566567374 6 27 33 18.18181818 566567374 22 37 59 37.28813559 3 566568517 V|2.17.7|04_01_13 PD9777b D 2 14441581 14441581 1 a 300 10 270.2709961 None None 6 14441580 14441587 4 1 0 0 4 3 0 0 21 21 15 20 21 21 15 20 4 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 34 38 10.52631579 566568517 7 40 47 14.89361702 566568517 23 59 82 28.04878049 2 566570301 V|2.17.7|04_01_13 PD9777b D 2 29860764 29860766 3 ata 298 15 324.3259888 None None 2 29860763 29860771 4 2 0 0 4 2 0 0 25 12 10 15 25 12 10 15 4 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 22 25 12 566570301 6 29 35 17.14285714 566570301 19 44 63 30.15873016 2 566570790 V|2.17.7|04_01_13 PD9777b D 2 34337615 34337617 3 tgg 480 25 432.4339905 None None 1 34337614 34337619 4 4 0 0 6 5 0 0 17 22 16 16 17 22 16 16 6 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 25 28 10.71428571 566570790 12 25 37 32.43243243 566570790 19 47 66 28.78787879 2 566573291 V|2.17.7|04_01_13 PD9777b D 2 53553584 53553586 3 aac 269 12 270.2709961 None None 1 53553583 53553587 2 3 0 0 2 3 0 0 19 16 13 16 19 16 13 16 2 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 23 26 11.53846154 566573291 6 25 31 19.35483871 566573291 21 41 62 33.87096774 2 566581251 V|2.17.7|04_01_13 PD9777b I 2 22082876 22082877 1 T 277 6 267.2609863 None None 9 22082876 22082886 5 0 0 0 5 6 0 0 33 27 18 18 33 27 18 20 5 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 28 32 12.5 566581251 9 47 56 16.07142857 566581251 12 63 75 16 2 566584660 V|2.17.7|04_01_13 PD9777b I 2 53589518 53589519 1 A 300 6 266.6589966 None None 9 53589518 53589528 5 0 0 0 5 2 0 0 20 17 18 13 20 17 18 13 5 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 38 44 13.63636364 566584660 7 35 42 16.66666667 566584660 18 67 85 21.17647059 2 566597137 V|2.17.7|04_01_13 PD9777b D 6 57774200 57774200 1 t 211 14 378.4500122 None None 6 57774199 57774206 6 1 0 0 6 0 0 0 17 5 13 17 17 6 13 17 6 1 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 26 30 13.33333333 566597137 5 19 24 20.83333333 566597137 9 52 61 14.75409836 2 566603232 V|2.17.7|04_01_13 PD9777b I 6 40285691 40285692 1 A 360 7 321.2890015 None None 6 40285691 40285698 6 0 0 0 9 7 0 0 27 20 19 17 27 20 19 17 9 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 9 34 43 20.93023256 566603232 16 42 58 27.5862069 566603232 47 74 121 38.84297521 3 566650939 V|2.17.7|04_01_13 PD9777b D 11 73013090 73013090 1 g 300 10 270.6300049 None None 7 73013089 73013097 1 4 0 0 2 6 0 0 21 21 16 22 21 21 16 22 2 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 10 40 50 20 566650939 8 29 37 21.62162162 566650939 46 116 162 28.39506173 2 566651783 V|2.17.7|04_01_13 PD9777b D 11 79896644 79896644 1 a 269 12 270.6300049 None None 9 79896643 79896653 2 3 0 0 2 3 0 0 27 26 17 23 27 26 17 23 2 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 48 52 7.692307692 566651783 0 53 53 0 566651783 1 84 85 1.176470588 NA 566654334 V|2.17.7|04_01_13 PD9777b D 11 99307534 99307534 1 t 360 15 324.756012 None None 1 99307533 99307535 4 2 0 0 5 2 0 0 23 13 14 19 23 13 14 19 5 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 25 32 21.875 566654334 5 30 35 14.28571429 566654334 12 23 35 34.28571429 2 566690211 V|2.17.7|04_01_13 PD9777b D 18 2792071 2792072 2 ct 420 20 383.1440125 None None 1 2792070 2792074 3 4 0 0 4 4 0 0 13 19 18 17 13 19 18 17 4 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 22 30 26.66666667 566690211 5 25 30 16.66666667 566690211 35 22 57 61.40350877 3 566757473 V|2.17.7|04_01_13 PD9777b D 12 127292074 127292074 1 a 300 10 270.2109985 None None 8 127292073 127292082 1 4 0 0 1 4 0 0 14 18 14 12 14 18 14 12 1 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 27 32 15.625 566757473 2 36 38 5.263157895 566757473 16 64 80 20 2 566771151 V|2.17.7|04_01_13 PD9777b D 10 8336371 8336375 5 aagag 238 10 271.6149902 None None 1 8336370 8336379 4 1 0 0 4 2 0 0 33 31 26 16 33 31 26 16 4 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 50 56 10.71428571 566771151 2 51 53 3.773584906 566771151 20 95 115 17.39130435 2 566773425 V|2.17.7|04_01_13 PD9777b D 10 21238744 21238744 1 t 300 10 271.6149902 None None 6 21238743 21238750 1 4 0 0 2 6 0 0 26 30 14 22 26 30 14 22 2 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 53 61 13.1147541 566773425 3 51 54 5.555555556 566773425 15 65 80 18.75 2 566868304 V|2.17.7|04_01_13 PD9777b D 6 29483722 29483722 1 g 269 6 270.70401 None None 2 29483721 29483724 5 0 0 0 5 1 0 0 25 16 13 12 25 16 13 12 5 1 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 31 37 16.21621622 566868304 4 27 31 12.90322581 566868304 22 38 60 36.66666667 3 566892415 V|2.17.7|04_01_13 PD9777b D 2 84024631 84024631 1 t 540 24 486.3999939 None None 9 84024630 84024640 2 7 0 0 3 7 0 0 17 21 11 14 17 21 11 14 3 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 11 38 49 22.44897959 566892415 6 34 40 15 566892415 18 58 76 23.68421053 2 566948270 V|2.17.7|04_01_13 PD9777b D X 45521338 45521338 1 t 360 12 326.625 None None 4 45521337 45521342 5 1 0 0 8 1 0 0 21 14 11 18 21 14 11 18 8 1 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 9 25 34 26.47058824 566948270 3 24 27 11.11111111 566948270 25 25 50 50 2 566959884 V|2.17.7|04_01_13 PD9777b D 7 49162730 49162730 1 a 300 12 271.2279968 None None 5 49162729 49162735 2 3 0 0 2 3 0 0 14 19 25 9 14 19 25 9 2 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 30 36 16.66666667 566959884 5 30 35 14.28571429 566959884 14 53 67 20.89552239 2 566965815 V|2.17.7|04_01_13 PD9777b I 7 34063572 34063573 1 A 300 6 267.0130005 None None 8 34063564 34063573 0 5 0 0 2 6 0 0 15 30 18 19 16 30 18 19 2 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 31 39 20.51282051 566965815 4 36 40 10 566965815 16 26 42 38.0952381 3 566993497 V|2.17.7|04_01_13 PD9777b D 1 208392035 208392037 3 tgt 269 12 269.756012 None None 2 208392034 208392041 3 2 0 0 4 2 0 0 18 21 24 25 18 21 24 25 4 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 30 37 18.91891892 566993497 3 27 30 10 566993497 15 68 83 18.07228916 2 567058949 V|2.17.7|04_01_13 PD9777b I 7 147785526 147785527 1 A 300 6 266.9809875 None None 9 147785526 147785536 5 0 0 0 5 2 0 0 19 8 23 9 19 8 23 9 5 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 23 30 23.33333333 567058949 9 27 36 25 567058949 11 38 49 22.44897959 2 567061069 V|2.17.7|04_01_13 PD9777b D 16 50996913 50996914 2 ca 300 12 271.6159973 None None 9 50996912 50996931 3 2 0 0 3 2 0 0 13 15 16 16 13 15 16 16 3 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 26 31 16.12903226 567061069 0 30 30 0 567061069 0 65 65 0 NA 567075350 V|2.17.7|04_01_13 PD9777b D 1 25088795 25088795 1 c 300 12 267.4079895 None None 2 25088794 25088797 2 3 0 0 3 3 0 0 21 13 10 15 21 13 10 15 3 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 25 31 19.35483871 567075350 0 28 28 0 567075350 16 48 64 25 NA 567087461 V|2.17.7|04_01_13 PD9777b D 1 117508504 117508504 1 g 360 16 323.0570068 None None 1 117508503 117508505 3 3 0 0 3 3 0 0 15 13 8 15 15 13 8 15 3 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 21 27 22.22222222 567087461 4 30 34 11.76470588 567087461 15 34 49 30.6122449 2 567104085 V|2.17.7|04_01_13 PD9777b D 20 47389596 47389597 2 ga 300 10 272.2349854 None None 1 47389595 47389599 1 4 0 0 1 4 0 0 21 13 13 21 21 13 13 21 1 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 24 29 17.24137931 567104085 1 20 21 4.761904762 567104085 16 46 62 25.80645161 NA 567112163 V|2.17.7|04_01_13 PD9777b D 19 9846129 9846132 4 aaac 420 20 380.7720032 None None 1 9846128 9846136 4 3 0 0 4 3 0 0 15 16 16 17 15 16 16 17 4 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 22 30 26.66666667 567112163 1 18 19 5.263157895 567112163 15 60 75 20 NA 567131559 V|2.17.7|04_01_13 PD9777b D 3 190274652 190274652 1 t 360 12 324.0769959 None None 3 190274651 190274655 1 5 0 0 1 5 0 0 24 21 11 14 24 21 11 14 1 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 33 39 15.38461538 567131559 3 30 33 9.090909091 567131559 18 47 65 27.69230769 3 567134855 V|2.17.7|04_01_13 PD9777b I 3 109220397 109220398 1 T 300 6 267.0539856 None None 9 109220397 109220407 5 0 0 0 5 2 0 0 23 15 12 17 23 15 12 17 5 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 32 39 17.94871795 567134855 10 40 50 20 567134855 19 53 72 26.38888889 2 567143775 V|2.17.7|04_01_13 PD9777b I 3 191036637 191036638 1 A 300 6 267.0539856 None None 6 191036637 191036644 5 0 0 0 8 5 0 0 29 19 16 14 29 19 16 14 8 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 13 42 55 23.63636364 567143775 10 41 51 19.60784314 567143775 34 83 117 29.05982906 3 567173714 V|2.17.7|04_01_13 PD9777b D 10 52916813 52916813 1 t 300 12 269.6549988 None None 9 52916812 52916822 3 2 0 0 4 2 0 0 20 15 19 14 20 15 19 14 4 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 30 36 16.66666667 567173714 5 25 30 16.66666667 567173714 13 42 55 23.63636364 2 567201164 V|2.17.7|04_01_13 PD9777b D 14 60242102 60242102 1 t 300 12 270.4920044 None None 9 60242101 60242111 3 2 0 0 3 2 0 0 18 17 12 20 18 17 12 20 3 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 32 37 13.51351351 567201164 2 41 43 4.651162791 567201164 19 43 62 30.64516129 2 567218675 V|2.17.7|04_01_13 PD9777b D 20 7610732 7610733 2 gt 360 12 327.3900146 None None 9 7610731 7610750 1 5 0 0 1 5 0 0 11 27 12 16 11 27 12 16 1 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 33 39 15.38461538 567218675 0 36 36 0 567218675 1 64 65 1.538461538 2 567259383 V|2.17.7|04_01_13 PD9777b D 8 58086432 58086432 1 t 300 12 270.1470032 None None 8 58086431 58086440 2 3 0 0 2 4 0 0 18 27 15 16 18 27 15 16 2 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 39 45 13.33333333 567259383 3 35 38 7.894736842 567259383 0 75 75 0 NA 567261146 V|2.17.7|04_01_13 PD9777b D 8 73041263 73041263 1 t 360 16 324.177002 None None 9 73041262 73041272 3 3 0 0 3 6 0 0 17 29 20 18 17 29 20 18 3 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 9 43 52 17.30769231 567261146 4 43 47 8.510638298 567261146 22 92 114 19.29824561 2 567281563 V|2.17.7|04_01_13 PD9777b D X 63450541 63450541 1 a 329 15 325.2780151 None None 1 63450540 63450542 2 4 0 0 4 4 0 0 16 18 22 18 16 18 22 18 4 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 24 30 20 567281563 0 9 9 0 567281563 23 24 47 48.93617021 2 568205231 V|2.17.7|04_01_13 PD9777b D 12 587800 587800 1 a 449 24 433.3129883 None None 8 587799 587808 3 5 0 0 7 11 0 0 63 76 23 19 63 76 23 19 7 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 43 50 14 568205231 6 52 58 10.34482759 568205231 19 131 150 12.66666667 2 568206107 V|2.17.7|04_01_13 PD9777b D 12 5184181 5184181 1 a 780 50 703.5310059 None None 5 5184180 5184186 9 4 0 0 11 5 0 0 79 55 18 10 79 55 18 10 11 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 33 39 15.38461538 568206107 1 53 54 1.851851852 568206107 16 123 139 11.51079137 NA 568206549 V|2.17.7|04_01_13 PD9777b D 12 7733554 7733554 1 a 840 63 758.2969971 None None 6 7733553 7733560 6 8 0 0 7 12 0 0 65 71 13 17 65 71 13 17 7 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 36 36 0 568206549 0 58 58 0 568206549 19 124 143 13.28671329 NA 568208275 V|2.17.7|04_01_13 PD9777b D 12 15598903 15598916 14 aaatt<4>tttgt 377 56 703.5310059 None None 1 15598902 15598920 6 7 0 0 7 7 0 0 42 32 9 18 42 32 9 18 7 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 27 33 18.18181818 568208275 8 24 32 25 568208275 18 46 64 28.125 3 568212816 V|2.17.7|04_01_13 PD9777b I 12 4679761 4679762 1 A 1740 30 1553.300049 None None 7 4679754 4679762 0 29 0 0 36 46 0 0 68 78 11 20 68 79 11 21 36 46 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 16 22 38 42.10526316 568212816 20 33 53 37.73584906 568212816 84 45 129 65.11627907 3 568213900 V|2.17.7|04_01_13 PD9777b I 12 10655032 10655033 1 A 420 8 374.9339905 None None 8 10655032 10655041 7 0 0 0 13 8 0 0 86 67 11 11 87 67 11 11 13 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 41 43 4.651162791 568213900 2 54 56 3.571428571 568213900 21 124 145 14.48275862 2 568216427 V|2.17.7|04_01_13 PD9777b I 12 27700517 27700518 1 G 540 10 482.0580139 None None 5 27700512 27700518 0 9 0 0 10 10 0 0 51 46 17 14 51 47 17 14 10 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 27 29 6.896551724 568216427 2 35 37 5.405405405 568216427 18 69 87 20.68965517 2 568219371 V|2.17.7|04_01_13 PD9777b D 20 41137284 41137285 2 ag 480 24 433.3859863 None None 3 41137283 41137290 3 5 0 0 6 8 0 0 22 37 15 10 22 37 15 10 6 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 16 17 5.882352941 568219371 5 33 38 13.15789474 568219371 14 43 57 24.56140351 2 568219591 V|2.17.7|04_01_13 PD9777b D 20 42518412 42518412 1 a 697 49 650.3800049 None None 8 42518411 42518420 6 6 0 0 8 8 0 0 38 38 15 11 38 38 15 11 8 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 34 39 12.82051282 568219591 3 32 35 8.571428571 568219591 17 69 86 19.76744186 2 568221046 V|2.17.7|04_01_13 PD9777b D 20 51314615 51314615 1 c 600 35 542.4849854 None None 2 51314614 51314617 6 4 0 0 9 4 0 0 37 33 16 18 37 33 16 18 9 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 27 28 3.571428571 568221046 2 22 24 8.333333333 568221046 13 50 63 20.63492063 2 568221071 V|2.17.7|04_01_13 PD9777b D 20 51606402 51606402 1 t 600 36 542.4849854 None None 9 51606401 51606411 5 5 0 0 9 12 0 0 35 42 15 18 35 42 15 18 9 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 37 41 9.756097561 568221071 3 40 43 6.976744186 568221071 23 71 94 24.46808511 2 568221427 V|2.17.7|04_01_13 PD9777b D 20 53633813 53633813 1 t 840 63 758.8770142 None None 8 53633812 53633821 8 6 0 0 9 7 0 0 52 43 14 12 52 43 14 12 9 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 34 35 2.857142857 568221427 4 38 42 9.523809524 568221427 17 83 100 17 2 568225219 V|2.17.7|04_01_13 PD9777b I 20 43085080 43085081 1 A 360 7 321.8789978 None None 9 43085071 43085081 0 6 0 0 4 9 0 0 37 51 19 22 37 51 19 22 4 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 26 31 16.12903226 568225219 2 23 25 8 568225219 13 52 65 20 2 568225744 V|2.17.7|04_01_13 PD9777b I 20 47035066 47035067 1 C 600 11 535.8619995 None None 4 47035066 47035071 10 0 0 0 18 9 0 0 41 30 15 15 41 30 15 15 18 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 40 45 11.11111111 568225744 4 15 19 21.05263158 568225744 29 58 87 33.33333333 2 568226718 V|2.17.7|04_01_13 PD9777b I 20 53300553 53300554 1 T 1260 22 1125.969971 None None 6 53300553 53300560 21 0 0 0 31 19 0 0 56 43 18 18 56 43 18 18 31 19 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 30 36 16.66666667 568226718 10 38 48 20.83333333 568226718 53 90 143 37.06293706 2 568226866 V|2.17.7|04_01_13 PD9777b I 20 54444374 54444375 1 A 540 10 482.8179932 None None 6 54444374 54444381 9 0 0 0 13 9 0 0 44 51 25 14 44 51 25 14 13 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 32 35 8.571428571 568226866 5 45 50 10 568226866 23 83 106 21.69811321 2 568228986 V|2.17.7|04_01_13 PD9777b D 19 34531659 34531659 1 t 329 15 325.3909912 None None 8 34531658 34531667 2 4 0 0 2 5 0 0 29 35 18 21 29 35 18 21 2 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 28 28 0 568228986 0 31 31 0 568228986 7 56 63 11.11111111 1 568235127 V|2.17.7|04_01_13 PD9777b I 19 37805189 37805190 1 T 300 6 268.1489868 None None 8 37805189 37805198 5 0 0 0 7 7 0 0 39 35 9 11 39 35 9 11 7 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 17 20 15 568235127 8 36 44 18.18181818 568235127 12 64 76 15.78947368 2 568236373 V|2.17.7|04_01_13 PD9777b I 19 47994951 47994952 1 C 480 9 429.0379944 None None 2 47994949 47994952 0 8 0 0 6 11 0 0 20 26 12 10 20 26 12 10 6 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 14 17 17.64705882 568236373 4 6 10 40 568236373 17 27 44 38.63636364 2 568241218 V|2.17.7|04_01_13 PD9777b D 11 77004007 77004019 13 taaaaagccttgt 348 49 647.7269897 None None 2 77004006 77004037 6 6 0 0 6 7 0 0 56 53 12 19 56 53 12 19 6 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 26 28 7.142857143 568241218 4 30 34 11.76470588 568241218 17 79 96 17.70833333 2 568242356 V|2.17.7|04_01_13 PD9777b D 11 85813372 85813382 11 tcataatcaaa 609 130 1132.319946 None None 1 85813371 85813383 9 12 0 0 10 13 0 0 41 27 22 13 41 27 22 13 10 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 27 33 18.18181818 568242356 5 30 35 14.28571429 568242356 24 41 65 36.92307692 3 568242975 V|2.17.7|04_01_13 PD9777b D 11 90055149 90055149 1 g 720 48 647.7269897 None None 2 90055148 90055151 5 7 0 0 6 14 0 0 26 27 13 16 26 27 13 16 6 14 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 28 32 12.5 568242975 4 30 34 11.76470588 568242975 22 28 50 44 3 568246945 V|2.17.7|04_01_13 PD9777b D 11 117529158 117529162 5 tgccc 658 48 647.7269897 None None 1 117529157 117529163 5 7 0 0 5 9 0 0 32 29 20 25 32 29 20 25 5 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 23 24 4.166666667 568246945 6 31 37 16.21621622 568246945 18 38 56 32.14285714 NA 568248154 V|2.17.7|04_01_13 PD9777b D 11 125633444 125633447 4 aaga 925 99 971.5910034 None None 2 125633443 125633452 8 10 0 0 10 12 0 0 29 37 20 11 29 37 20 11 10 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 21 24 12.5 568248154 4 28 32 12.5 568248154 22 36 58 37.93103448 3 568248427 V|2.17.7|04_01_13 PD9777b D 11 127533093 127533093 1 t 660 42 593.75 None None 7 127533092 127533100 5 6 0 0 7 9 0 0 24 38 14 19 24 38 14 19 7 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 32 36 11.11111111 568248427 3 36 39 7.692307692 568248427 17 58 75 22.66666667 2 568250608 V|2.17.7|04_01_13 PD9777b I 11 61903641 61903642 1 A 480 9 427.0020142 None None 6 61903641 61903648 8 0 0 0 10 8 0 0 28 21 24 22 28 21 24 22 10 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 18 22 18.18181818 568250608 3 8 11 27.27272727 568250608 18 47 65 27.69230769 2 568251513 V|2.17.7|04_01_13 PD9777b I 11 68881553 68881554 7 AGGCGGT 377 14 646.3150024 None None 1 68881545 68881554 0 13 0 0 10 13 0 0 46 53 13 19 46 54 13 21 10 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 21 23 8.695652174 568251513 1 9 10 10 568251513 23 71 94 24.46808511 3 568252094 V|2.17.7|04_01_13 PD9777b I 11 72965476 72965477 3 CAA 929 17 834.1359863 None None 8 72965476 72965501 16 0 0 0 22 17 0 0 71 68 16 24 72 68 16 24 22 17 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 10 34 44 22.72727273 568252094 9 36 45 20 568252094 42 89 131 32.0610687 2 568260878 V|2.17.7|04_01_13 PD9777b D 21 20970942 20970942 1 t 540 24 489.0109863 None None 8 20970941 20970950 7 2 0 0 8 4 0 0 26 19 16 17 26 19 16 17 8 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 36 40 10 568260878 4 37 41 9.756097561 568260878 13 44 57 22.80701754 2 568261386 V|2.17.7|04_01_13 PD9777b D 21 23635039 23635039 1 a 600 36 543.3449707 None None 1 23635038 23635040 5 5 0 0 6 8 0 0 22 33 21 12 22 33 21 12 6 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 13 13 26 50 568261386 26 20 46 56.52173913 568261386 39 23 62 62.90322581 3 568261974 V|2.17.7|04_01_13 PD9777b D 21 26997269 26997269 1 t 900 72 815.0180054 None None 8 26997268 26997277 8 7 0 0 12 10 0 0 46 27 19 15 46 27 19 15 12 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 29 31 6.451612903 568261974 2 21 23 8.695652174 568261974 22 70 92 23.91304348 2 568263359 V|2.17.7|04_01_13 PD9777b D 21 36217905 36217908 4 aagc 476 35 543.3449707 None None 1 36217904 36217912 4 6 0 0 4 8 0 0 54 55 13 19 54 55 13 19 4 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 28 28 0 568263359 0 26 26 0 568263359 13 85 98 13.26530612 1 568267132 V|2.17.7|04_01_13 PD9777b I 21 23626128 23626129 1 T 300 6 268.6619873 None None 8 23626120 23626129 0 5 0 0 6 6 0 0 21 26 13 19 21 26 13 19 6 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 27 27 0 568267132 3 24 27 11.11111111 568267132 6 29 35 17.14285714 2 568268574 V|2.17.7|04_01_13 PD9777b I 21 32651459 32651460 1 A 420 8 375.5249939 None None 9 32651459 32651469 7 0 0 0 11 5 0 0 38 44 21 23 39 44 21 23 11 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 30 34 11.76470588 568268574 5 25 30 16.66666667 568268574 18 67 85 21.17647059 2 568270289 V|2.17.7|04_01_13 PD9777b I 21 43526446 43526447 1 A 358 8 376.1270142 None None 8 43526438 43526447 0 7 0 0 5 8 0 0 30 24 9 21 30 25 9 21 5 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 27 31 12.90322581 568270289 2 2 4 50 568270289 12 37 49 24.48979592 2 568272773 V|2.17.7|04_01_13 PD9777b D 18 33490316 33490316 1 a 600 35 541.7189941 None None 7 33490315 33490323 4 6 0 0 8 9 0 0 28 36 16 17 28 36 16 17 8 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 33 38 13.15789474 568272773 3 23 26 11.53846154 568272773 18 52 70 25.71428571 2 568276568 V|2.17.7|04_01_13 PD9777b D 18 62727699 62727699 1 t 900 70 812.5780029 None None 9 62727698 62727708 6 9 0 0 7 11 0 0 18 25 15 17 18 25 15 17 7 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 23 29 20.68965517 568276568 6 21 27 22.22222222 568276568 20 41 61 32.78688525 2 568279617 V|2.17.7|04_01_13 PD9777b I 18 20937171 20937172 1 T 360 12 321.4190063 None None 0 20937171 20937173 1 5 0 0 1 0 0 0 26 27 24 16 26 27 24 16 1 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 9 21 30 30 568279617 6 26 32 18.75 568279617 20 29 49 40.81632653 2 568281357 V|2.17.7|04_01_13 PD9777b I 18 37389371 37389372 1 T 600 11 535.697998 None None 7 37389371 37389379 10 0 0 0 11 11 0 0 23 20 15 17 23 20 15 17 11 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 27 31 12.90322581 568281357 2 21 23 8.695652174 568281357 25 36 61 40.98360656 2 568282504 V|2.17.7|04_01_13 PD9777b I 18 47608752 47608753 1 A 720 13 642.8380127 None None 6 47608752 47608759 12 0 0 0 16 14 0 0 31 32 28 22 33 32 28 22 16 14 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 31 35 11.42857143 568282504 8 28 36 22.22222222 568282504 30 53 83 36.14457831 2 568282580 V|2.17.7|04_01_13 PD9777b I 18 48325278 48325279 1 A 600 20 535.697998 None None 9 48325278 48325288 9 1 0 0 13 8 0 0 25 25 20 15 25 25 20 15 13 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 23 25 8 568282580 6 31 37 16.21621622 568282580 21 34 55 38.18181818 2 568284925 V|2.17.7|04_01_13 PD9777b I 18 66972208 66972209 1 A 360 7 321.4190063 None None 8 66972208 66972217 6 0 0 0 8 12 0 0 27 36 16 17 27 36 17 17 8 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 19 22 13.63636364 568284925 2 31 33 6.060606061 568284925 21 54 75 28 2 568287885 V|2.17.7|04_01_13 PD9777b D 1 145434980 145434983 4 agag 389 20 374.4869995 None None 5 145434979 145434991 4 3 0 0 8 6 0 0 41 38 16 17 41 38 16 17 8 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 15 24 39 38.46153846 568287885 10 22 32 31.25 568287885 37 44 81 45.67901235 3 568290066 V|2.17.7|04_01_13 PD9777b D 1 158958031 158958031 1 c 360 12 322.5369873 None None 1 158958030 158958032 1 5 0 0 3 6 0 0 45 41 22 15 45 41 22 15 3 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 31 36 13.88888889 568290066 6 30 36 16.66666667 568290066 12 65 77 15.58441558 2 568294188 V|2.17.7|04_01_13 PD9777b D 1 187288214 187288214 1 t 420 18 376.2929993 None None 7 187288213 187288221 5 2 0 0 5 6 0 0 39 43 15 9 39 43 15 9 5 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 42 48 12.5 568294188 4 48 52 7.692307692 568294188 11 74 85 12.94117647 2 568295665 V|2.17.7|04_01_13 PD9777b D 1 196006095 196006095 1 t 360 12 322.5369873 None None 7 196006094 196006102 1 5 0 0 4 9 0 0 54 62 18 16 54 62 18 16 4 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 42 45 6.666666667 568295665 3 61 64 4.6875 568295665 13 107 120 10.83333333 2 568297758 V|2.17.7|04_01_13 PD9777b D 1 210048368 210048368 1 a 329 15 322.5369873 None None 8 210048367 210048376 4 2 0 0 7 5 0 0 48 47 22 16 48 47 22 16 7 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 41 44 6.818181818 568297758 3 51 54 5.555555556 568297758 13 85 98 13.26530612 2 568298747 V|2.17.7|04_01_13 PD9777b D 1 216527998 216528003 6 aaagac 580 120 1075.119995 None None 1 216527997 216528006 9 11 0 0 11 12 0 0 54 47 19 20 54 47 19 20 11 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 23 30 23.33333333 568298747 6 39 45 13.33333333 568298747 29 63 92 31.52173913 3 568300103 V|2.17.7|04_01_13 PD9777b D 1 225265634 225265635 2 ac 540 28 483.8049927 None None 4 225265633 225265643 6 3 0 0 7 4 0 0 45 37 22 13 45 37 22 13 7 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 45 47 4.255319149 568300103 1 56 57 1.754385965 568300103 12 80 92 13.04347826 2 568301028 V|2.17.7|04_01_13 PD9777b D 1 231537560 231537563 4 gata 1107 112 1075.119995 None None 2 231537559 231537568 13 7 0 0 16 8 0 0 48 37 18 22 48 37 18 22 16 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 30 36 16.66666667 568301028 5 39 44 11.36363636 568301028 27 56 83 32.53012048 2 568302326 V|2.17.7|04_01_13 PD9777b D 1 238900840 238900840 1 a 420 20 376.2929993 None None 3 238900839 238900843 4 3 0 0 5 3 0 0 43 31 14 13 43 31 14 13 5 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 27 27 0 568302326 4 21 25 16 568302326 9 53 62 14.51612903 2 568302333 V|2.17.7|04_01_13 PD9777b D 1 239012906 239012906 1 g 780 50 698.2269897 None None 1 239012905 239012907 4 9 0 0 6 9 0 0 47 51 14 16 47 51 14 16 6 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 39 41 4.87804878 568302333 3 38 41 7.317073171 568302333 17 79 96 17.70833333 2 568311171 V|2.17.7|04_01_13 PD9777b I 1 182188006 182188007 6 TTTTTG 232 9 401.1499939 None None 3 182188006 182188030 8 0 0 0 7 4 0 0 80 67 21 23 81 67 21 23 8 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 40 40 0 568311171 0 15 15 0 568311171 15 104 119 12.60504202 1 568312269 V|2.17.7|04_01_13 PD9777b I 1 189891715 189891716 1 T 420 8 372.0780029 None None 8 189891707 189891716 0 7 0 0 9 8 0 0 46 42 17 22 46 43 17 22 9 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 21 25 16 568312269 1 28 29 3.448275862 568312269 15 54 69 21.73913043 2 568312677 V|2.17.7|04_01_13 PD9777b I 1 193796192 193796193 1 A 540 10 476.5799866 None None 9 193796183 193796193 0 9 0 0 5 15 0 0 37 59 13 15 39 59 13 15 5 15 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 36 39 7.692307692 568312677 1 31 32 3.125 568312677 20 64 84 23.80952381 2 568314008 V|2.17.7|04_01_13 PD9777b I 1 203676022 203676023 5 GATGG 478 10 456.7120056 None None 1 203676022 203676028 9 0 0 0 9 10 0 0 52 58 16 12 53 58 16 13 9 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 37 39 5.128205128 568314008 6 46 52 11.53846154 568314008 21 92 113 18.5840708 2 568314861 V|2.17.7|04_01_13 PD9777b I 1 210865182 210865183 1 A 300 6 265.769989 None None 6 210865176 210865183 0 5 0 0 6 10 0 0 40 71 25 16 40 71 25 16 6 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 35 36 2.777777778 568314861 4 36 40 10 568314861 17 82 99 17.17171717 2 568315673 V|2.17.7|04_01_13 PD9777b I 1 217459755 217459756 1 T 960 17 850.4650269 None None 9 217459755 217459765 16 0 0 0 28 32 0 0 50 57 14 19 51 58 14 19 28 32 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 31 39 20.51282051 568315673 16 43 59 27.11864407 568315673 69 91 160 43.125 3 568315843 V|2.17.7|04_01_13 PD9777b I 1 218929566 218929567 1 A 360 7 318.9240112 None None 6 218929560 218929567 0 6 0 0 8 10 0 0 64 57 16 26 64 57 16 27 8 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 32 34 5.882352941 568315843 3 45 48 6.25 568315843 19 84 103 18.44660194 2 568319354 V|2.17.7|04_01_13 PD9777b I 1 244977430 244977431 1 G 660 42 584.0930176 None None 0 244977430 244977431 5 6 0 0 14 9 0 0 59 50 17 19 60 50 17 19 14 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 9 38 47 19.14893617 568319354 5 22 27 18.51851852 568319354 26 67 93 27.95698925 3 568319969 V|2.17.7|04_01_13 PD9777b I 1 249188488 249188489 1 T 420 8 372.0780029 None None 8 249188488 249188497 7 0 0 0 9 6 0 0 50 52 18 12 52 53 18 12 9 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 38 41 7.317073171 568319969 6 49 55 10.90909091 568319969 14 93 107 13.08411215 2 568320403 V|2.17.7|04_01_13 PD9777b D 3 96342991 96342991 1 t 441 32 538.5830078 None None 6 96342990 96342997 3 7 0 0 5 8 0 0 25 29 15 19 25 29 15 19 5 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 34 36 5.555555556 568320403 4 31 35 11.42857143 568320403 15 49 64 23.4375 2 568322083 V|2.17.7|04_01_13 PD9777b D 3 109308293 109308293 1 a 660 36 592.440979 None None 6 109308292 109308299 3 8 0 0 4 12 0 0 27 34 17 12 27 34 17 12 4 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 30 34 11.76470588 568322083 2 37 39 5.128205128 568322083 16 54 70 22.85714286 2 568322094 V|2.17.7|04_01_13 PD9777b D 3 109382088 109382088 1 t 629 36 590.6350098 None None 1 109382087 109382089 3 8 0 0 3 12 0 0 27 27 17 7 27 27 17 7 3 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 27 31 12.90322581 568322094 2 20 22 9.090909091 568322094 16 30 46 34.7826087 2 568322365 V|2.17.7|04_01_13 PD9777b D 3 111362102 111362102 1 a 600 35 538.5830078 None None 9 111362101 111362111 4 6 0 0 6 9 0 0 27 24 13 16 27 24 13 16 6 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 28 30 6.666666667 568322365 6 41 47 12.76595745 568322365 16 44 60 26.66666667 2 568322603 V|2.17.7|04_01_13 PD9777b D 3 112820431 112820434 4 tttg 815 60 807.8740234 None None 2 112820430 112820440 11 4 0 0 15 5 0 0 44 33 12 16 44 33 12 16 15 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 22 25 12 568322603 4 32 36 11.11111111 568322603 19 48 67 28.35820896 2 568323598 V|2.17.7|04_01_13 PD9777b D 3 120335015 120335015 1 a 960 72 861.7329712 None None 2 120335014 120335017 11 5 0 0 13 8 0 0 39 29 13 16 39 29 13 16 13 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 23 27 14.81481481 568323598 5 16 21 23.80952381 568323598 21 41 62 33.87096774 3 568324405 V|2.17.7|04_01_13 PD9777b D 3 126130390 126130390 1 t 840 64 754.0159912 None None 9 126130389 126130399 7 7 0 0 9 7 0 0 33 42 12 11 33 42 12 11 9 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 24 27 11.11111111 568324405 5 38 43 11.62790698 568324405 18 66 84 21.42857143 2 568326648 V|2.17.7|04_01_13 PD9777b D 3 143812105 143812108 4 agat 449 24 430.8659973 None None 3 143812104 143812118 5 3 0 0 8 5 0 0 20 27 20 16 20 27 20 16 8 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 27 29 6.896551724 568326648 2 27 29 6.896551724 568326648 17 29 46 36.95652174 2 568329734 V|2.17.7|04_01_13 PD9777b D 3 165269419 165269420 2 tg 540 28 484.1229858 None None 2 165269418 165269423 3 6 0 0 5 9 0 0 24 33 18 12 24 33 18 12 5 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 27 29 6.896551724 568329734 6 22 28 21.42857143 568329734 14 37 51 27.45098039 2 568330304 V|2.17.7|04_01_13 PD9777b D 3 169306402 169306402 1 t 720 49 646.2990112 None None 9 169306401 169306411 6 6 0 0 8 9 0 0 50 38 14 20 50 38 14 20 8 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 29 30 3.333333333 568330304 4 46 50 8 568330304 17 78 95 17.89473684 2 568336429 V|2.17.7|04_01_13 PD9777b I 3 100354689 100354690 1 A 300 6 266.2810059 None None 8 100354689 100354698 5 0 0 0 9 4 0 0 44 39 7 13 44 39 8 14 9 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 32 25 57 56.14035088 568336429 28 27 55 50.90909091 568336429 51 55 106 48.11320755 3 568337521 V|2.17.7|04_01_13 PD9777b I 3 109220406 109220407 1 T 480 9 426.0499878 None None 9 109220397 109220407 0 8 0 0 10 9 0 0 27 36 12 17 27 36 12 17 10 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 23 30 23.33333333 568337521 10 28 38 26.31578947 568337521 18 35 53 33.96226415 3 568337548 V|2.17.7|04_01_13 PD9777b I 3 109314329 109314330 4 TTTG 387 9 411.6000061 None None 1 109314329 109314334 8 0 0 0 9 6 0 0 48 29 26 10 49 29 26 10 9 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 26 29 10.34482759 568337548 3 35 38 7.894736842 568337548 18 68 86 20.93023256 2 568341181 V|2.17.7|04_01_13 PD9777b I 3 140851513 140851514 4 ATAT 526 11 513.8980103 None None 9 140851494 140851514 0 10 0 0 5 12 0 0 30 39 18 19 30 39 18 19 5 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 20 20 0 568341181 0 17 17 0 568341181 16 44 60 26.66666667 1 568342060 V|2.17.7|04_01_13 PD9777b I 3 148230111 148230112 1 A 449 9 425.447998 None None 9 148230102 148230112 0 8 0 0 4 11 0 0 32 38 16 18 34 39 16 19 4 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 31 31 0 568342060 5 25 30 16.66666667 568342060 13 41 54 24.07407407 2 568344273 V|2.17.7|04_01_13 PD9777b I 3 165216610 165216611 2 AG 300 6 262.6690063 None None 6 165216598 165216611 0 5 0 0 7 5 0 0 31 37 14 19 31 37 14 19 7 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 41 41 0 568344273 0 41 41 0 568344273 12 45 57 21.05263158 1 568344335 V|2.17.7|04_01_13 PD9777b I 3 165675408 165675409 1 A 360 7 319.5369873 None None 8 165675400 165675409 0 6 0 0 12 8 0 0 33 37 19 14 33 37 19 14 12 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 27 30 10 568344335 9 33 42 21.42857143 568344335 23 39 62 37.09677419 3 568345884 V|2.17.7|04_01_13 PD9777b I 3 177442892 177442893 1 A 660 12 585.2160034 None None 8 177442892 177442901 11 0 0 0 14 11 0 0 67 47 15 20 68 47 15 20 14 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 38 43 11.62790698 568345884 10 56 66 15.15151515 568345884 26 88 114 22.80701754 2 568346698 V|2.17.7|04_01_13 PD9777b I 3 184464128 184464129 1 C 960 17 851.4979858 None None 6 184464122 184464129 0 16 0 0 11 22 0 0 40 43 24 11 40 43 24 11 11 22 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 19 24 20.83333333 568346698 6 10 16 37.5 568346698 29 39 68 42.64705882 2 568347669 V|2.17.7|04_01_13 PD9777b I 3 191036643 191036644 1 A 720 13 639.0750122 None None 6 191036637 191036644 0 12 0 0 14 20 0 0 33 57 16 14 33 57 16 14 14 20 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 13 28 41 31.70731707 568347669 10 34 44 22.72727273 568347669 34 47 81 41.97530864 2 568351480 V|2.17.7|04_01_13 PD9777b D 7 73672479 73672479 1 a 898 80 861.8140259 None None 3 73672478 73672482 9 7 0 0 10 11 0 0 37 44 12 22 37 44 12 22 10 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 29 30 3.333333333 568351480 1 17 18 5.555555556 568351480 21 49 70 30 2 568352094 V|2.17.7|04_01_13 PD9777b D 7 77815846 77815848 3 gaa 840 63 754.0869751 None None 3 77815845 77815855 8 6 0 0 9 10 0 0 40 36 15 16 40 36 15 16 9 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 21 24 12.5 568352094 1 34 35 2.857142857 568352094 21 68 89 23.59550562 2 568352678 V|2.17.7|04_01_13 PD9777b D 7 81776410 81776410 1 a 726 56 700.223999 None None 9 81776409 81776419 7 6 0 0 9 7 0 0 40 40 21 22 40 40 21 22 9 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 26 30 13.33333333 568352678 2 28 30 6.666666667 568352678 15 70 85 17.64705882 2 568353479 V|2.17.7|04_01_13 PD9777b D 7 88770150 88770150 1 t 720 48 646.3610229 None None 9 88770149 88770159 5 7 0 0 8 14 0 0 35 32 17 16 35 32 17 16 8 14 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 36 42 14.28571429 568353479 3 40 43 6.976744186 568353479 22 60 82 26.82926829 2 568356888 V|2.17.7|04_01_13 PD9777b D 7 113077000 113077000 1 t 660 40 592.4970093 None None 8 113076999 113077008 4 7 0 0 7 9 0 0 37 31 15 16 37 31 15 16 7 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 30 34 11.76470588 568356888 2 30 32 6.25 568356888 17 60 77 22.07792208 2 568356938 V|2.17.7|04_01_13 PD9777b D 7 113637483 113637483 1 a 478 30 484.769989 None None 9 113637482 113637492 4 5 0 0 7 7 0 0 22 28 16 18 22 28 16 18 7 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 24 24 0 568356938 0 20 20 0 568356938 12 39 51 23.52941176 1 568357972 V|2.17.7|04_01_13 PD9777b D 7 122781074 122781074 1 t 720 33 646.3610229 None None 9 122781073 122781083 2 10 0 0 4 14 0 0 34 38 18 19 34 38 18 19 4 14 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 21 26 19.23076923 568357972 3 39 42 7.142857143 568357972 20 65 85 23.52941176 2 568358088 V|2.17.7|04_01_13 PD9777b D 7 124019138 124019138 1 a 1169 96 1077.27002 None None 6 124019137 124019144 5 15 0 0 7 16 0 0 37 41 12 26 37 41 12 26 7 16 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 38 43 11.62790698 568358088 5 30 35 14.28571429 568358088 22 70 92 23.91304348 2 568366258 V|2.17.7|04_01_13 PD9777b I 7 69741530 69741531 1 T 540 28 479.3519897 None None 0 69741530 69741531 6 3 0 0 10 4 0 0 44 46 17 12 44 48 17 12 10 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 30 32 6.25 568366258 4 20 24 16.66666667 568366258 15 71 86 17.44186047 2 568368948 V|2.17.7|04_01_13 PD9777b I 7 93201535 93201536 1 T 480 9 426.0910034 None None 8 93201535 93201544 8 0 0 0 11 9 0 0 47 36 23 16 48 36 23 16 11 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 25 28 10.71428571 568368948 6 38 44 13.63636364 568368948 22 70 92 23.91304348 2 568369222 V|2.17.7|04_01_13 PD9777b I 7 95734360 95734361 1 T 540 10 478.75 None None 9 95734351 95734361 0 9 0 0 9 10 0 0 29 39 19 18 29 39 19 18 9 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 20 23 13.04347826 568369222 8 23 31 25.80645161 568369222 22 44 66 33.33333333 3 568370308 V|2.17.7|04_01_13 PD9777b I 7 103713970 103713971 1 A 480 9 426.0910034 None None 9 103713961 103713971 0 8 0 0 5 8 0 0 30 29 22 28 30 30 22 28 5 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 16 17 5.882352941 568370308 9 26 35 25.71428571 568370308 14 31 45 31.11111111 2 568373851 V|2.17.7|04_01_13 PD9777b I 7 133380245 133380246 1 T 540 10 479.3519897 None None 8 133380237 133380246 0 9 0 0 9 9 0 0 43 32 19 15 44 33 19 15 9 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 36 40 10 568373851 3 35 38 7.894736842 568373851 19 44 63 30.15873016 2 568375322 V|2.17.7|04_01_13 PD9777b I 7 144364233 144364234 1 A 780 14 692.3969727 None None 6 144364227 144364234 0 13 0 0 13 16 0 0 38 37 21 21 38 38 21 21 13 16 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 31 36 13.88888889 568375322 3 23 26 11.53846154 568375322 28 38 66 42.42424242 3 568381030 V|2.17.7|04_01_13 PD9777b D 1 23501423 23501426 4 ttca 629 42 591.0859985 None None 7 23501422 23501454 5 6 0 0 7 6 0 0 25 38 14 30 25 38 14 30 7 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 26 31 16.12903226 568381030 3 32 35 8.571428571 568381030 17 48 65 26.15384615 2 568382516 V|2.17.7|04_01_13 PD9777b D 1 34241013 34241013 1 t 660 42 589.882019 None None 9 34241012 34241022 6 5 0 0 9 7 0 0 39 29 11 20 39 29 11 20 9 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 29 35 17.14285714 568382516 5 34 39 12.82051282 568382516 16 63 79 20.25316456 2 568387364 V|2.17.7|04_01_13 PD9777b D 1 71667704 71667704 1 c 540 30 483.6159973 None None 1 71667703 71667705 4 5 0 0 7 8 0 0 31 34 23 14 31 34 23 14 7 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 20 24 16.66666667 568387364 3 20 23 13.04347826 568387364 15 46 61 24.59016393 2 568388907 V|2.17.7|04_01_13 PD9777b D 1 81849649 81849653 5 aaaag 325 24 428.677002 None None 3 81849648 81849668 5 3 0 0 5 5 0 0 34 21 16 11 34 21 16 11 7 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 14 16 12.5 568388907 1 12 13 7.692307692 568388907 13 31 44 29.54545455 2 568392937 V|2.17.7|04_01_13 PD9777b D 1 110149468 110149468 1 g 480 24 429.881012 None None 2 110149467 110149470 3 5 0 0 6 9 0 0 27 30 15 6 27 30 15 6 6 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 20 26 23.07692308 568392937 3 29 32 9.375 568392937 16 37 53 30.18867925 2 568393077 V|2.17.7|04_01_13 PD9777b D 1 111185932 111185932 1 c 397 18 375.5440063 None None 6 111185931 111185938 2 5 0 0 3 8 0 0 26 22 13 26 26 22 13 26 3 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 12 15 20 568393077 5 24 29 17.24137931 568393077 8 40 48 16.66666667 2 568394141 V|2.17.7|04_01_13 PD9777b D 1 119281623 119281624 2 ga 838 70 805.4240112 None None 2 119281622 119281627 6 9 0 0 7 10 0 0 31 28 14 20 31 28 14 20 7 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 25 25 0 568394141 4 31 35 11.42857143 568394141 21 34 55 38.18181818 2 568401796 V|2.17.7|04_01_13 PD9777b I 1 49202981 49202982 1 A 420 8 371.9309998 None None 9 49202981 49202991 7 0 0 0 14 9 0 0 49 30 11 20 49 30 11 21 14 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 30 32 6.25 568401796 7 23 30 23.33333333 568401796 21 63 84 25 2 568403007 V|2.17.7|04_01_13 PD9777b I 1 61912883 61912884 1 T 480 9 424.4620056 None None 6 61912883 61912890 8 0 0 0 16 5 0 0 45 29 23 9 45 29 23 9 16 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 30 33 9.090909091 568403007 2 36 38 5.263157895 568403007 22 65 87 25.28735632 2 568406798 V|2.17.7|04_01_13 PD9777b I 1 91787501 91787502 1 A 360 7 318.7980042 None None 6 91787501 91787508 6 0 0 0 7 3 0 0 43 28 19 13 43 29 19 13 7 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 37 38 2.631578947 568406798 0 32 32 0 568406798 11 68 79 13.92405063 NA 568407104 V|2.17.7|04_01_13 PD9777b I 1 93637880 93637881 1 A 360 7 318.7980042 None None 9 93637871 93637881 0 6 0 0 4 7 0 0 35 28 14 19 35 28 14 19 4 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 30 32 6.25 568407104 2 23 25 8 568407104 10 42 52 19.23076923 2 568411415 V|2.17.7|04_01_13 PD9777b D 10 43872608 43872614 7 gtatgat 319 36 591.7349854 None None 1 43872607 43872619 3 8 0 0 4 10 0 0 30 28 11 18 30 28 11 18 4 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 33 38 13.15789474 568411415 2 9 11 18.18181818 568411415 14 33 47 29.78723404 2 568416035 V|2.17.7|04_01_13 PD9777b D 10 80152680 80152687 8 agacaatg 609 126 1130.219971 None None 2 80152679 80152697 8 13 0 0 11 13 0 0 23 16 11 12 23 16 11 12 11 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 30 36 16.66666667 568416035 2 14 16 12.5 568416035 26 11 37 70.27027027 3 568419677 V|2.17.7|04_01_13 PD9777b D 10 107907727 107907728 2 ag 1140 110 1022.530029 None None 2 107907726 107907731 9 10 0 0 12 12 0 0 25 20 21 21 25 20 21 21 12 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 29 35 17.14285714 568419677 3 18 21 14.28571429 568419677 22 20 42 52.38095238 3 568433270 V|2.17.7|04_01_13 PD9777b I 10 118520184 118520185 1 T 300 6 266.2340088 None None 8 118520176 118520185 0 5 0 0 4 7 0 0 14 24 16 18 14 24 16 18 4 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 24 28 14.28571429 568433270 5 27 32 15.625 568433270 11 19 30 36.66666667 2 568434543 V|2.17.7|04_01_13 PD9777b I 10 127796330 127796331 1 C 600 11 531.8660278 None None 7 127796330 127796338 10 0 0 0 13 10 0 0 28 19 20 20 28 19 20 20 13 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 22 23 4.347826087 568434543 3 20 23 13.04347826 568434543 25 39 64 39.0625 2 568439766 V|2.17.7|04_01_13 PD9777b D 8 26537008 26537008 1 t 629 42 597.223999 None None 9 26537007 26537017 6 5 0 0 12 11 0 0 30 30 15 22 30 30 15 22 12 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 34 36 5.555555556 568439766 11 36 47 23.40425532 568439766 25 54 79 31.64556962 2 568442578 V|2.17.7|04_01_13 PD9777b I 8 2703224 2703225 1 T 269 6 267.8529968 None None 6 2703218 2703225 0 5 0 0 8 9 0 0 27 31 21 16 27 32 21 16 8 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 34 37 8.108108108 568442578 3 25 28 10.71428571 568442578 17 33 50 34 2 568444982 V|2.17.7|04_01_13 PD9777b I 8 19673261 19673262 1 A 540 10 483.2189941 None None 7 19673261 19673269 9 0 0 0 14 11 0 0 29 25 12 14 30 26 12 14 14 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 20 22 9.090909091 568444982 3 16 19 15.78947368 568444982 26 43 69 37.68115942 2 568445565 V|2.17.7|04_01_13 PD9777b I 8 24626605 24626606 1 A 480 9 429.5280151 None None 9 24626605 24626615 8 0 0 0 16 5 0 0 33 19 17 12 33 19 17 13 16 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 25 28 10.71428571 568445565 2 21 23 8.695652174 568445565 21 43 64 32.8125 2 568447071 V|2.17.7|04_01_13 PD9777b I 8 37497682 37497683 1 A 360 7 321.5440063 None None 9 37497673 37497683 0 6 0 0 10 13 0 0 31 29 11 20 33 30 11 21 10 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 14 17 17.64705882 568447071 6 23 29 20.68965517 568447071 22 29 51 43.1372549 2 568449626 V|2.17.7|04_01_13 PD9777b D 5 11582772 11582772 1 g 517 28 487.5249939 None None 2 11582771 11582774 6 3 0 0 7 4 0 0 40 42 13 19 40 42 13 19 7 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 36 36 0 568449626 0 46 46 0 568449626 12 62 74 16.21621622 NA 568451065 V|2.17.7|04_01_13 PD9777b D 5 20080408 20080408 1 t 569 35 541.6950073 None None 7 20080407 20080415 4 6 0 0 5 7 0 0 32 27 16 16 33 27 16 16 6 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 32 37 13.51351351 568451065 4 45 49 8.163265306 568451065 12 55 67 17.91044776 2 568452123 V|2.17.7|04_01_13 PD9777b D 5 26560220 26560220 1 a 356 25 432.7539978 None None 6 26560219 26560226 4 4 0 0 4 4 0 0 29 20 9 20 29 20 9 20 4 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 32 32 0 568452123 0 34 34 0 568452123 8 46 54 14.81481481 NA 568452127 V|2.17.7|04_01_13 PD9777b D 5 26577845 26577845 1 t 540 28 487.5249939 None None 7 26577844 26577852 3 6 0 0 3 9 0 0 19 38 10 20 19 38 10 20 3 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 21 21 0 568452127 5 36 41 12.19512195 568452127 12 54 66 18.18181818 NA 568458046 V|2.17.7|04_01_13 PD9777b I 5 18382745 18382746 1 A 1320 23 1177.280029 None None 6 18382745 18382752 22 0 0 0 30 16 0 0 50 37 17 16 50 37 17 16 30 16 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 30 33 9.090909091 568458046 17 32 49 34.69387755 568458046 50 72 122 40.98360656 2 568461433 V|2.17.7|04_01_13 PD9777b I 5 42582141 42582142 5 CCAGC 983 21 1023.179993 None None 1 42582141 42582149 20 0 0 0 22 9 0 0 44 17 25 14 44 17 25 15 22 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 25 29 13.79310345 568461433 0 1 1 0 568461433 31 38 69 44.92753623 2 568463746 V|2.17.7|04_01_13 PD9777b D 4 14377814 14377816 3 tat 840 60 758.5620117 None None 2 14377813 14377821 9 5 0 0 10 6 0 0 24 16 15 17 24 16 15 17 10 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 19 22 13.63636364 568463746 5 23 28 17.85714286 568463746 16 20 36 44.44444444 2 568464575 V|2.17.7|04_01_13 PD9777b D 4 20666557 20666559 3 ttc 838 72 813.3900146 None None 1 20666556 20666561 8 7 0 0 9 9 0 0 28 22 17 21 28 22 17 21 9 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 22 26 15.38461538 568464575 5 23 28 17.85714286 568464575 20 26 46 43.47826087 2 568466431 V|2.17.7|04_01_13 PD9777b D 4 33651387 33651388 2 ag 780 56 704.9379883 None None 3 33651386 33651393 6 7 0 0 8 8 0 0 22 29 21 16 22 29 21 16 8 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 29 31 6.451612903 568466431 4 23 27 14.81481481 568466431 16 26 42 38.0952381 2 568467788 V|2.17.7|04_01_13 PD9777b D 4 41982426 41982426 1 g 595 42 596.4860229 None None 3 41982425 41982429 5 6 0 0 6 9 0 0 20 14 29 11 20 14 29 11 6 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 23 26 11.53846154 568467788 4 11 15 26.66666667 568467788 14 17 31 45.16129032 2 568468046 V|2.17.7|04_01_13 PD9777b D 4 44104158 44104158 1 t 720 45 650.7119751 None None 3 44104157 44104161 8 4 0 0 10 7 0 0 24 18 17 17 24 18 17 17 10 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 18 19 5.263157895 568468046 3 23 26 11.53846154 568468046 18 20 38 47.36842105 2 568479319 V|2.17.7|04_01_13 PD9777b D 16 66572331 66572333 3 cac 418 24 433.2160034 None None 2 66572330 66572337 5 3 0 0 14 4 0 0 45 53 17 10 45 53 17 10 14 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 33 33 0 568479319 0 31 31 0 568479319 1 68 69 1.449275362 NA 568480413 V|2.17.7|04_01_13 PD9777b D 16 73371726 73371747 22 ctttc<12>ttact 203 18 379.0639954 None None 1 73371725 73371755 5 2 0 0 7 1 0 0 33 36 19 12 33 37 19 12 7 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 16 17 5.882352941 568480413 2 23 25 8 568480413 10 37 47 21.27659574 2 568480884 V|2.17.7|04_01_13 PD9777b D 16 75964970 75964970 1 a 660 40 595.6710205 None None 7 75964969 75964977 4 7 0 0 7 8 0 0 54 39 15 20 54 39 15 20 7 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 37 43 13.95348837 568480884 8 39 47 17.0212766 568480884 17 86 103 16.50485437 2 568481499 V|2.17.7|04_01_13 PD9777b D 16 79824923 79824924 2 ta 420 18 379.0639954 None None 3 79824922 79824930 2 5 0 0 3 6 0 0 29 57 12 15 29 57 12 15 3 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 34 34 0 568481499 4 33 37 10.81081081 568481499 12 79 91 13.18681319 2 568483487 V|2.17.7|04_01_13 PD9777b DI 16 66572336 66572339 4 G 329 12 0 None None 0 66572336 66572339 5 1 0 0 0 0 0 0 40 52 17 10 40 52 17 10 5 1 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 30 30 0 568483487 5 30 35 14.28571429 568483487 19 65 84 22.61904762 2 568486226 V|2.17.7|04_01_13 PD9777b I 16 67352760 67352761 1 A 300 6 267.1470032 None None 9 67352760 67352770 5 0 0 0 5 7 0 0 34 54 11 12 37 55 12 12 5 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 25 28 10.71428571 568486226 6 26 32 18.75 568486226 13 70 83 15.6626506 2 568486479 V|2.17.7|04_01_13 PD9777b I 16 70110263 70110264 1 T 301 7 321.2990112 None None 9 70110254 70110264 0 6 0 0 6 9 0 0 28 36 5 21 30 37 5 21 6 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 30 35 14.28571429 568486479 6 18 24 25 568486479 15 32 47 31.91489362 3 568487691 V|2.17.7|04_01_13 PD9777b I 16 78327023 78327024 1 C 929 17 856.7979736 None None 1 78327023 78327025 16 0 0 0 23 27 0 0 53 47 18 15 54 49 18 15 23 27 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 26 29 10.34482759 568487691 9 38 47 19.14893617 568487691 49 43 92 53.26086957 3 568487706 V|2.17.7|04_01_13 PD9777b I 16 78451415 78451416 1 A 1109 20 1016.849976 None None 8 78451415 78451424 19 0 0 0 22 21 0 0 52 43 22 19 52 45 22 19 22 21 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 32 37 13.51351351 568487706 7 36 43 16.27906977 568487706 42 80 122 34.42622951 3 568493596 V|2.17.7|04_01_13 PD9777b D 17 51669951 51669951 1 a 900 70 810.8220215 None None 9 51669950 51669960 6 9 0 0 6 10 0 0 41 47 14 15 41 47 14 15 6 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 40 42 4.761904762 568493596 5 44 49 10.20408163 568493596 18 81 99 18.18181818 2 568493708 V|2.17.7|04_01_13 PD9777b D 17 52683101 52683101 1 a 540 30 486.8540039 None None 9 52683100 52683110 4 5 0 0 8 6 0 0 22 50 14 16 22 50 14 16 8 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 30 30 0 568493708 0 27 27 0 568493708 15 69 84 17.85714286 1 568496829 V|2.17.7|04_01_13 PD9777b D 17 73264660 73264671 12 ggagaatcgctt 493 90 919.0120239 None None 1 73264659 73264675 9 8 0 0 9 9 0 0 26 25 14 15 26 25 14 15 9 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 22 30 26.66666667 568496829 7 19 26 26.92307692 568496829 33 29 62 53.22580645 2 568499195 V|2.17.7|04_01_13 PD9777b I 17 29570875 29570876 1 A 517 10 481.4360046 None None 1 29570874 29570876 0 9 0 0 10 10 0 0 35 33 15 18 37 33 15 18 10 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 22 25 12 568499195 6 16 22 27.27272727 568499195 19 44 63 30.15873016 2 568499970 V|2.17.7|04_01_13 PD9777b I 17 35893143 35893144 1 T 356 9 427.9429932 None None 9 35893134 35893144 0 8 0 0 4 10 0 0 32 50 20 15 32 50 20 15 4 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 36 39 7.692307692 568499970 6 31 37 16.21621622 568499970 11 54 65 16.92307692 2 568510698 V|2.17.7|04_01_13 PD9777b D 6 29248991 29248991 1 a 780 56 702.1480103 None None 9 29248990 29249000 6 7 0 0 8 11 0 0 25 38 15 17 25 38 15 17 8 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 37 41 9.756097561 568510698 2 32 34 5.882352941 568510698 19 59 78 24.35897436 2 568512847 V|2.17.7|04_01_13 PD9777b D 6 41814668 41814670 3 gag 509 18 486.1029968 None None 2 41814667 41814674 1 8 0 0 3 10 0 0 27 36 15 11 27 36 15 11 3 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 23 27 14.81481481 568512847 6 44 50 12 568512847 17 42 59 28.81355932 2 568516114 V|2.17.7|04_01_13 PD9777b DI 6 48666425 48666724 300 TAAATAAATAAAT 261 30 0 None None 0 48666425 48666724 4 5 0 0 0 0 0 0 37 30 20 17 41 35 20 17 4 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 0 0 NA 568516114 0 0 0 NA 568516114 2 0 2 100 2 568516498 V|2.17.7|04_01_13 PD9777b I 6 901081 901082 1 C 960 17 853.3460083 None None 7 901074 901082 0 16 0 0 9 16 0 0 20 43 13 18 20 43 13 18 9 17 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 30 33 9.090909091 568516498 4 23 27 14.81481481 568516498 27 32 59 45.76271186 2 568519559 V|2.17.7|04_01_13 PD9777b I 6 21492312 21492313 2 TT 569 35 528.072998 None None 0 21492312 21492313 4 6 0 0 4 7 0 0 25 24 24 21 25 24 24 21 4 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 23 25 8 568519559 4 19 23 17.39130435 568519559 14 33 47 29.78723404 2 568524644 V|2.17.7|04_01_13 PD9777b I 6 57765485 57765486 1 T 212 7 320.4559937 None None 8 57765485 57765494 6 0 0 0 8 7 0 0 38 32 14 22 39 32 14 22 8 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 36 37 2.702702703 568524644 6 41 47 12.76595745 568524644 15 58 73 20.54794521 2 568525121 V|2.17.7|04_01_13 PD9777b D 11 2913174 2913181 8 ttccttca 232 21 432.0979919 None None 1 2913173 2913189 2 6 0 0 3 9 0 0 19 26 12 13 19 27 12 13 3 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 14 17 17.64705882 568525121 1 1 2 50 568525121 18 20 38 47.36842105 2 568525623 V|2.17.7|04_01_13 PD9777b D 11 5861301 5861301 1 t 1140 104 1027.660034 None None 6 5861300 5861307 7 12 0 0 8 15 0 0 34 40 18 15 34 40 18 15 8 15 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 25 25 0 568525623 0 31 31 0 568525623 22 63 85 25.88235294 1 568526110 V|2.17.7|04_01_13 PD9777b D 11 8806494 8806543 50 gaaac<40>gcatg 290 35 540.8759766 None None 1 8806493 8806547 4 6 0 0 3 1 0 0 37 31 11 15 38 36 11 15 4 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 6 8 25 568526110 2 17 19 10.52631579 568526110 6 34 40 15 2 568529439 V|2.17.7|04_01_13 PD9777b D 11 28063846 28063846 1 g 997 88 919.4890137 None None 2 28063845 28063848 7 10 0 0 11 14 0 0 37 43 14 17 37 43 14 17 11 14 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 30 31 3.225806452 568529439 3 38 41 7.317073171 568529439 25 48 73 34.24657534 2 568530349 V|2.17.7|04_01_13 PD9777b D 11 34498076 34498079 4 ttta 838 72 811.3129883 None None 2 34498075 34498087 7 8 0 0 8 9 0 0 49 44 21 14 49 44 21 14 8 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 24 28 14.28571429 568530349 5 30 35 14.28571429 568530349 18 66 84 21.42857143 2 568530810 V|2.17.7|04_01_13 PD9777b D 11 37694905 37694905 1 a 1020 90 919.4890137 None None 8 37694904 37694913 8 9 0 0 10 9 0 0 56 44 14 13 56 44 14 13 10 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 32 35 8.571428571 568530810 4 30 34 11.76470588 568530810 20 87 107 18.69158879 2 568531447 V|2.17.7|04_01_13 PD9777b D 11 41399112 41399112 1 t 600 32 540.8759766 None None 8 41399111 41399120 3 7 0 0 7 12 0 0 34 46 19 11 34 46 19 11 7 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 33 35 5.714285714 568531447 2 39 41 4.87804878 568531447 20 72 92 21.73913043 2 568531668 V|2.17.7|04_01_13 PD9777b D 11 42751916 42751916 1 t 749 56 703.1380005 None None 5 42751915 42751921 6 7 0 0 6 13 0 0 42 46 17 13 42 46 17 13 6 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 38 39 2.564102564 568531668 5 39 44 11.36363636 568531668 19 77 96 19.79166667 2 568532925 V|2.17.7|04_01_13 PD9777b D 11 50114160 50114160 1 t 417 20 378.6130066 None None 3 50114159 50114163 4 3 0 0 8 7 0 0 33 35 13 17 33 35 13 17 8 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 30 34 11.76470588 568532925 5 31 36 13.88888889 568532925 16 44 60 26.66666667 2 568536435 V|2.17.7|04_01_13 PD9777b I 11 21000807 21000808 1 A 360 7 320.3110046 None None 6 21000801 21000808 0 6 0 0 9 12 0 0 48 48 13 23 50 48 13 23 9 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 36 39 7.692307692 568536435 2 41 43 4.651162791 568536435 23 71 94 24.46808511 2 568538796 V|2.17.7|04_01_13 PD9777b I 11 37839206 37839207 1 T 360 7 320.9129944 None None 6 37839206 37839213 6 0 0 0 8 10 0 0 36 48 16 17 36 49 16 17 8 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 42 48 12.5 568538796 3 35 38 7.894736842 568538796 20 72 92 21.73913043 2 568540245 V|2.17.7|04_01_13 PD9777b I 11 48220133 48220134 1 T 360 7 319.7090149 None None 9 48220133 48220143 6 0 0 0 9 10 0 0 36 45 17 30 36 46 17 30 9 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 10 39 49 20.40816327 568540245 7 38 45 15.55555556 568540245 18 64 82 21.95121951 2 568541032 V|2.17.7|04_01_13 PD9777b D X 67096977 67096996 20 agaac<10>gagat 261 30 486.7160034 None None 1 67096976 67097000 5 4 0 0 5 4 0 0 19 19 15 17 20 19 15 17 6 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 21 22 4.545454545 568541032 2 25 27 7.407407407 568541032 12 21 33 36.36363636 2 568541291 V|2.17.7|04_01_13 PD9777b D X 69998478 69998502 25 tttgt<15>tgttt 203 20 379.026001 None None 1 69998477 69998524 3 4 0 0 2 1 0 0 19 11 17 11 20 14 17 11 3 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 18 19 5.263157895 568541291 1 19 20 5 568541291 8 15 23 34.7826087 2 568542829 V|2.17.7|04_01_13 PD9777b D X 86399125 86399125 1 a 660 30 595.6110229 None None 5 86399124 86399130 2 9 0 0 4 10 0 0 23 28 21 19 23 28 21 19 4 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 23 26 11.53846154 568542829 1 24 25 4 568542829 17 47 64 26.5625 2 568543235 V|2.17.7|04_01_13 PD9777b D X 88840782 88840782 1 g 599 60 812.1970215 None None 2 88840781 88840784 4 11 0 0 7 13 0 0 17 26 6 17 17 26 6 17 7 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 12 15 20 568543235 6 12 18 33.33333333 568543235 20 19 39 51.28205128 2 568544729 V|2.17.7|04_01_13 PD9777b D X 105873852 105873852 1 a 726 56 703.9039917 None None 7 105873851 105873859 7 6 0 0 12 11 0 0 25 24 15 18 25 24 15 18 12 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 29 32 9.375 568544729 4 30 34 11.76470588 568544729 21 41 62 33.87096774 2 568546764 V|2.17.7|04_01_13 PD9777b D X 130047144 130047153 10 cataagttta 493 90 920.4899902 None None 1 130047143 130047155 8 9 0 0 10 10 0 0 31 25 23 25 31 25 23 25 10 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 20 25 20 568546764 4 18 22 18.18181818 568546764 28 28 56 50 3 568547688 V|2.17.7|04_01_13 PD9777b D X 142576883 142576884 2 ac 540 30 487.3179932 None None 1 142576882 142576886 4 5 0 0 7 8 0 0 24 27 12 15 24 27 12 15 7 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 21 21 0 568547688 0 36 36 0 568547688 16 30 46 34.7826087 1 568547853 V|2.17.7|04_01_13 PD9777b D X 144172413 144172422 10 aaatcacctc 348 40 649.7579956 None None 1 144172412 144172426 3 9 0 0 4 9 0 0 14 24 15 13 14 24 15 13 4 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 11 12 8.333333333 568547853 6 19 25 24 568547853 18 17 35 51.42857143 3 568552218 V|2.17.7|04_01_13 PD9777b I X 100951522 100951523 1 C 480 9 428.355011 None None 1 100951522 100951524 8 0 0 0 10 7 0 0 24 24 17 23 24 27 18 23 10 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 18 19 5.263157895 568552218 3 10 13 23.07692308 568552218 20 20 40 50 2 568559180 V|2.17.7|04_01_13 PD9777b D 9 81680029 81680029 1 a 449 24 432.0859985 None None 8 81680028 81680037 3 5 0 0 7 7 0 0 31 47 9 16 31 47 9 16 7 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 26 30 13.33333333 568559180 5 34 39 12.82051282 568559180 15 66 81 18.51851852 2 568559413 V|2.17.7|04_01_13 PD9777b D 9 83621781 83621781 1 t 554 32 540.1079712 None None 2 83621780 83621783 7 3 0 0 9 7 0 0 23 38 21 8 23 38 21 8 9 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 31 35 11.42857143 568559413 1 34 35 2.857142857 568559413 15 37 52 28.84615385 2 568559500 V|2.17.7|04_01_13 PD9777b D 9 84126318 84126320 3 cca 927 84 917.5809937 None None 1 84126317 84126323 11 6 0 0 11 8 0 0 42 17 17 6 42 17 17 6 11 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 25 26 3.846153846 568559500 1 19 20 5 568559500 19 35 54 35.18518519 2 568566396 V|2.17.7|04_01_13 PD9777b D 9 134940359 134940367 9 ggaaggtag 522 99 972.1939697 None None 1 134940358 134940372 10 8 0 0 11 9 0 0 31 31 14 13 31 31 14 13 11 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 24 28 14.28571429 568566396 2 23 25 8 568566396 25 31 56 44.64285714 3 568568146 V|2.17.7|04_01_13 PD9777b DI 9 102629260 102629424 165 CGTAT 261 18 0 None None 0 102629260 102629424 1 8 0 0 0 0 0 0 17 19 21 14 18 27 21 14 1 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 0 1 100 568568146 0 0 0 NA 568568146 1 0 1 100 2 568571614 V|2.17.7|04_01_13 PD9777b I 9 88327100 88327101 4 TTGA 418 9 412.8200073 None None 1 88327096 88327101 0 8 0 0 6 9 0 0 28 34 17 18 28 35 17 18 6 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 35 40 12.5 568571614 0 27 27 0 568571614 15 43 58 25.86206897 2 568573376 V|2.17.7|04_01_13 PD9777b I 9 103945621 103945622 1 A 360 7 320.4519959 None None 7 103945614 103945622 0 6 0 0 10 9 0 0 30 33 13 20 31 34 13 20 10 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 26 30 13.33333333 568573376 2 27 29 6.896551724 568573376 19 38 57 33.33333333 2 568573577 V|2.17.7|04_01_13 PD9777b I 9 105492580 105492581 1 A 480 9 427.269989 None None 7 105492573 105492581 0 8 0 0 5 9 0 0 44 31 18 20 45 32 18 20 5 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 23 27 14.81481481 568573577 6 41 47 12.76595745 568573577 15 47 62 24.19354839 2 568573602 V|2.17.7|04_01_13 PD9777b I 9 105588909 105588910 1 A 389 8 373.8609924 None None 3 105588906 105588910 0 7 0 0 8 9 0 0 18 38 11 19 18 38 12 19 8 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 25 27 7.407407407 568573602 6 28 34 17.64705882 568573602 16 35 51 31.37254902 2 568577515 V|2.17.7|04_01_13 PD9777b I 9 136557347 136557348 1 G 540 10 480.0759888 None None 7 136557340 136557348 0 9 0 0 3 13 0 0 25 40 19 16 25 40 19 16 3 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 27 30 10 568577515 1 6 7 14.28571429 568577515 12 38 50 24 NA 568579542 V|2.17.7|04_01_13 PD9777b D 18 8660536 8660536 1 c 1320 143 1201.97998 None None 1 8660535 8660537 10 12 0 0 15 14 0 0 25 32 11 19 25 32 11 19 15 14 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 19 20 5 568579542 7 23 30 23.33333333 568579542 29 27 56 51.78571429 3 568582401 V|2.17.7|04_01_13 PD9777b I 18 9382520 9382521 1 A 446 9 431.6629944 None None 9 9382520 9382530 8 0 0 0 10 4 0 0 29 21 12 15 29 21 12 15 10 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 18 20 10 568582401 4 21 25 16 568582401 15 39 54 27.77777778 2 568584319 V|2.17.7|04_01_13 PD9777b D 17 5262231 5262231 1 t 532 30 490.0589905 None None 7 5262230 5262238 4 5 0 0 4 7 0 0 19 13 12 15 19 13 12 15 4 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 29 36 19.44444444 568584319 1 8 9 11.11111111 568584319 11 29 40 27.5 2 568585339 V|2.17.7|04_01_13 PD9777b D 17 11065871 11065871 1 c 420 20 381.1570129 None None 1 11065870 11065872 4 3 0 0 5 6 0 0 21 16 13 15 21 16 13 15 5 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 20 20 0 568585339 0 29 29 0 568585339 11 24 35 31.42857143 NA 568587614 V|2.17.7|04_01_13 PD9777b DI 17 21725044 21725082 39 ACCATGTTGGCTAGGATGGTCTCAATCTCCTGACTTC 360 12 0 None None 0 21725044 21725082 5 1 0 0 0 0 0 0 23 34 9 22 28 35 9 22 5 1 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 20 20 0 568587614 0 10 10 0 568587614 0 34 34 0 NA 568598624 V|2.17.7|04_01_13 PD9777b D 3 62997411 62997412 2 tt 629 30 594.2440186 None None 2 62997410 62997413 9 2 0 0 13 2 0 0 21 8 19 13 21 8 19 13 13 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 20 24 16.66666667 568598624 5 23 28 17.85714286 568598624 17 9 26 65.38461538 3 568601839 V|2.17.7|04_01_13 PD9777b D 3 84902290 84902290 1 t 780 54 701.6859741 None None 1 84902289 84902291 5 8 0 0 8 14 0 0 20 25 17 10 20 25 17 10 8 14 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 31 35 11.42857143 568601839 5 35 40 12.5 568601839 24 20 44 54.54545455 2 568602189 V|2.17.7|04_01_13 PD9777b D 3 87777596 87777596 1 a 749 44 702.2890015 None None 5 87777595 87777601 3 10 0 0 8 12 0 0 22 23 14 17 22 23 14 17 8 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 30 32 6.25 568602189 4 30 34 11.76470588 568602189 21 40 61 34.42622951 2 568602424 V|2.17.7|04_01_13 PD9777b D 3 89701679 89701679 1 a 660 36 594.2440186 None None 5 89701678 89701684 3 8 0 0 8 14 0 0 21 22 19 15 21 22 19 15 8 14 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 24 29 17.24137931 568602424 4 26 30 13.33333333 568602424 22 37 59 37.28813559 2 568602461 V|2.17.7|04_01_13 PD9777b D 3 90302424 90302424 1 t 569 35 540.2219849 None None 8 90302423 90302432 6 4 0 0 9 8 0 0 33 37 20 7 33 37 20 7 9 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 17 20 15 568602461 5 28 33 15.15151515 568602461 18 64 82 21.95121951 2 568606501 V|2.17.7|04_01_13 PD9777b I 3 27238650 27238651 1 T 540 10 480.7810059 None None 9 27238650 27238660 9 0 0 0 11 5 0 0 26 25 17 15 26 26 17 15 11 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 27 29 6.896551724 568606501 6 24 30 20 568606501 17 41 58 29.31034483 2 568606781 V|2.17.7|04_01_13 PD9777b I 3 30013730 30013731 1 A 360 7 320.5209961 None None 6 30013724 30013731 0 6 0 0 6 6 0 0 20 18 11 26 20 19 11 27 6 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 23 25 8 568606781 6 18 24 25 568606781 13 21 34 38.23529412 2 568614813 V|2.17.7|04_01_13 PD9777b D 2 9706639 9706645 7 ctccagc 232 21 431.2669983 None None 1 9706638 9706648 6 2 0 0 7 3 0 0 29 35 7 16 29 35 7 16 7 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 22 26 15.38461538 568614813 7 11 18 38.88888889 568614813 10 36 46 21.73913043 2 568620598 V|2.17.7|04_01_13 PD9777b D 2 49591253 49591277 25 agtat<15>aaaaa 319 40 592.992981 None None 1 49591252 49591280 4 7 0 0 3 6 0 0 30 31 13 13 30 32 13 13 4 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 16 20 20 568620598 6 21 27 22.22222222 568620598 19 25 44 43.18181818 3 568624842 V|2.17.7|04_01_13 PD9777b D 2 80267036 80267037 2 tt 540 28 485.1759949 None None 2 80267035 80267038 6 3 0 0 8 4 0 0 26 20 14 10 26 20 14 10 8 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 31 35 11.42857143 568624842 4 31 35 11.42857143 568624842 13 29 42 30.95238095 2 568624926 V|2.17.7|04_01_13 PD9777b D 2 80841410 80841410 1 a 337 12 322.848999 None None 7 80841409 80841417 1 5 0 0 4 8 0 0 32 34 14 17 32 34 14 17 4 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 28 30 6.666666667 568624926 5 31 36 13.88888889 568624926 13 59 72 18.05555556 2 568625222 V|2.17.7|04_01_13 PD9777b D 2 82925666 82925666 1 a 900 72 808.0250244 None None 7 82925665 82925673 8 7 0 0 9 11 0 0 37 36 17 16 37 36 17 16 9 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 37 39 5.128205128 568625222 3 24 27 11.11111111 568625222 20 68 88 22.72727273 2 568628069 V|2.17.7|04_01_13 PD9777b I 2 1504070 1504071 1 T 397 8 373.144989 None None 8 1504070 1504079 7 0 0 0 9 8 0 0 36 48 15 22 36 49 15 22 9 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 36 42 14.28571429 568628069 7 35 42 16.66666667 568628069 15 73 88 17.04545455 2 568633813 V|2.17.7|04_01_13 PD9777b I 2 46494137 46494138 2 AT 577 11 526.440979 None None 7 46494122 46494138 0 10 0 0 13 13 0 0 47 46 14 22 48 47 14 22 13 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 33 41 19.51219512 568633813 5 23 28 17.85714286 568633813 26 47 73 35.61643836 3 568634573 V|2.17.7|04_01_13 PD9777b I 2 53589527 53589528 1 A 360 7 319.2359924 None None 9 53589518 53589528 0 6 0 0 9 9 0 0 41 42 18 13 41 42 18 13 9 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 33 40 17.5 568634573 7 27 34 20.58823529 568634573 17 56 73 23.28767123 2 568642924 V|2.17.7|04_01_13 PD9777b D 6 87153797 87153805 9 ttgttataa 290 36 538.3410034 None None 2 87153796 87153816 5 5 0 0 5 7 0 0 30 34 21 19 30 34 21 19 5 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 22 23 4.347826087 568642924 4 33 37 10.81081081 568642924 14 43 57 24.56140351 2 568643718 V|2.17.7|04_01_13 PD9777b D 6 93088593 93088595 3 caa 749 54 699.2410278 None None 2 93088592 93088600 5 8 0 0 5 11 0 0 32 42 17 19 32 42 17 19 5 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 28 34 17.64705882 568643718 5 34 39 12.82051282 568643718 17 49 66 25.75757576 2 568647200 V|2.17.7|04_01_13 PD9777b D 6 118399222 118399222 1 t 637 36 592.1749878 None None 9 118399221 118399231 3 8 0 0 4 8 0 0 23 31 11 16 23 31 11 16 4 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 34 39 12.82051282 568647200 3 31 34 8.823529412 568647200 13 51 64 20.3125 2 568648434 V|2.17.7|04_01_13 PD9777b D 6 126497134 126497137 4 atta 987 96 968.4110107 None None 1 126497133 126497141 11 7 0 0 16 9 0 0 177 163 27 10 177 163 27 10 16 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 74 76 2.631578947 568648434 7 84 91 7.692307692 568648434 25 283 308 8.116883117 3 568648523 V|2.17.7|04_01_13 PD9777b D 6 127176055 127176055 1 a 780 54 699.8430176 None None 4 127176054 127176059 8 5 0 0 9 8 0 0 150 171 16 20 150 171 16 20 9 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 77 83 7.228915663 568648523 7 101 108 6.481481481 568648523 19 281 300 6.333333333 3 568653032 V|2.17.7|04_01_13 PD9777b D 6 158480625 158480625 1 c 480 24 430.0700073 None None 1 158480624 158480626 5 3 0 0 7 3 0 0 51 26 16 12 51 26 16 12 7 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 27 29 6.896551724 568653032 0 9 9 0 568653032 10 47 57 17.54385965 2 568654257 V|2.17.7|04_01_13 PD9777b D 6 165935990 165935990 1 a 877 72 807.5109863 None None 7 165935989 165935997 7 8 0 0 8 11 0 0 14 25 20 19 14 25 20 19 8 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 24 25 4 568654257 2 20 22 9.090909091 568654257 17 33 50 34 2 568656905 V|2.17.7|04_01_13 PD9777b I 6 68819018 68819019 1 T 300 6 266.1600037 None None 8 68819018 68819027 5 0 0 0 7 6 0 0 47 26 21 17 48 26 21 18 7 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 31 34 8.823529412 568656905 5 33 38 13.15789474 568656905 14 66 80 17.5 2 568657231 V|2.17.7|04_01_13 PD9777b I 6 71223702 71223703 1 T 360 7 319.3919983 None None 9 71223693 71223703 0 6 0 0 6 14 0 0 28 36 23 10 28 36 24 11 6 14 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 23 25 8 568657231 4 33 37 10.81081081 568657231 19 35 54 35.18518519 2 568659571 V|2.17.7|04_01_13 PD9777b I 6 90345520 90345521 1 T 540 10 477.8840027 None None 8 90345520 90345529 9 0 0 0 14 5 0 0 41 28 16 14 41 28 16 15 14 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 37 40 7.5 568659571 11 44 55 20 568659571 20 56 76 26.31578947 2 568663323 V|2.17.7|04_01_13 PD9777b I 6 121417152 121417153 2 CA 577 11 526.2990112 None None 1 121417152 121417156 10 0 0 0 13 8 0 0 34 29 17 14 34 29 17 14 13 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 25 28 10.71428571 568663323 4 31 35 11.42857143 568663323 21 56 77 27.27272727 2 568663971 V|2.17.7|04_01_13 PD9777b I 6 127235107 127235108 1 T 420 8 372.6239929 None None 6 127235101 127235108 0 7 0 0 9 11 0 0 186 188 21 14 188 189 21 15 9 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 92 96 4.166666667 568663971 2 127 129 1.550387597 568663971 21 318 339 6.194690265 2 568667050 V|2.17.7|04_01_13 PD9777b I 6 154289587 154289588 1 T 420 8 372.6239929 None None 6 154289587 154289594 7 0 0 0 9 5 0 0 44 45 11 17 45 46 11 17 9 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 35 39 10.25641026 568667050 4 40 44 9.090909091 568667050 14 75 89 15.73033708 2 568673211 V|2.17.7|04_01_13 PD9777b D 13 43784475 43784475 1 c 960 72 862.2520142 None None 4 43784474 43784479 11 5 0 0 16 10 0 0 24 18 15 15 24 18 15 15 16 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 26 32 18.75 568673211 5 26 31 16.12903226 568673211 28 14 42 66.66666667 3 568674735 V|2.17.7|04_01_13 PD9777b D 13 55636546 55636553 8 acacacag 377 50 700.5800171 None None 1 55636545 55636557 9 4 0 0 10 6 0 0 18 22 16 18 18 22 16 18 10 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 25 29 13.79310345 568674735 4 19 23 17.39130435 568674735 20 17 37 54.05405405 3 568675858 V|2.17.7|04_01_13 PD9777b D 13 63596917 63596917 1 a 1020 88 916.1430054 None None 9 63596916 63596926 7 10 0 0 10 12 0 0 35 48 19 12 35 48 19 12 10 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 30 35 14.28571429 568675858 5 27 32 15.625 568675858 24 77 101 23.76237624 2 568675950 V|2.17.7|04_01_13 PD9777b D 13 63711483 63711483 1 a 720 48 646.6890259 None None 6 63711482 63711489 7 5 0 0 7 9 0 0 28 47 10 21 28 47 10 21 7 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 37 37 0 568675950 0 32 32 0 568675950 17 67 84 20.23809524 1 568676500 V|2.17.7|04_01_13 PD9777b D 13 68011715 68011715 1 t 900 72 808.3610229 None None 9 68011714 68011724 8 7 0 0 10 9 0 0 24 36 23 20 24 36 23 20 10 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 24 27 11.11111111 568676500 4 40 44 9.090909091 568676500 19 53 72 26.38888889 2 568677926 V|2.17.7|04_01_13 PD9777b D 13 76905511 76905511 1 c 784 70 808.3610229 None None 2 76905510 76905513 9 6 0 0 10 10 0 0 28 44 18 10 28 44 18 10 10 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 34 39 12.82051282 568677926 5 30 35 14.28571429 568677926 21 43 64 32.8125 2 568678845 V|2.17.7|04_01_13 PD9777b D 13 82809302 82809302 1 a 624 40 592.7979736 None None 9 82809301 82809311 4 7 0 0 9 9 0 0 33 35 17 12 33 35 17 12 9 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 28 31 9.677419355 568678845 7 45 52 13.46153846 568678845 18 62 80 22.5 2 568678864 V|2.17.7|04_01_13 PD9777b D 13 82909857 82909857 1 a 600 35 538.9069824 None None 5 82909856 82909862 4 6 0 0 6 9 0 0 29 40 17 15 29 40 17 15 6 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 36 41 12.19512195 568678864 6 35 41 14.63414634 568678864 16 64 80 20 2 568679121 V|2.17.7|04_01_13 PD9777b D 13 84739272 84739272 1 t 552 40 583.7670288 None None 8 84739271 84739280 4 7 0 0 5 9 0 0 17 49 10 22 17 49 10 22 5 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 29 32 9.375 568679121 2 19 21 9.523809524 568679121 11 45 56 19.64285714 2 568684023 V|2.17.7|04_01_13 PD9777b D 13 114919180 114919188 9 ccatcatct 203 18 377.2349854 None None 2 114919179 114919202 5 2 0 0 7 6 0 0 40 38 13 14 40 38 13 14 7 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 35 41 14.63414634 568684023 3 39 42 7.142857143 568684023 17 54 71 23.94366197 2 568687973 V|2.17.7|04_01_13 PD9777b I 13 39245488 39245489 1 A 540 10 479.5979919 None None 8 39245480 39245489 0 9 0 0 10 12 0 0 29 28 13 18 29 28 13 18 10 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 21 24 12.5 568687973 2 24 26 7.692307692 568687973 22 31 53 41.50943396 2 568688813 V|2.17.7|04_01_13 PD9777b I 13 46298257 46298258 1 A 420 8 372.4190063 None None 9 46298257 46298267 7 0 0 0 10 9 0 0 26 28 18 12 26 28 18 12 10 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 27 28 3.571428571 568688813 6 24 30 20 568688813 20 47 67 29.85074627 2 568691723 V|2.17.7|04_01_13 PD9777b I 13 69971657 69971658 2 TA 300 6 263.4330139 None None 5 69971657 69971669 5 0 0 0 7 6 0 0 31 41 17 20 31 41 17 21 7 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 28 32 12.5 568691723 1 30 31 3.225806452 568691723 15 56 71 21.12676056 2 568692022 V|2.17.7|04_01_13 PD9777b I 13 71723545 71723546 1 T 480 9 426.3099976 None None 8 71723537 71723546 0 8 0 0 5 10 0 0 25 37 27 23 25 37 27 23 5 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 29 35 17.14285714 568692022 2 28 30 6.666666667 568692022 17 37 54 31.48148148 2 568699830 V|2.17.7|04_01_13 PD9777b D 4 63351578 63351579 2 tg 420 14 376.6489868 None None 1 63351577 63351581 6 1 0 0 9 3 0 0 32 20 26 10 32 20 26 10 9 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 30 30 0 568699830 0 20 20 0 568699830 15 32 47 31.91489362 1 568699885 V|2.17.7|04_01_13 PD9777b D 4 63639324 63639325 2 tc 569 32 537.4680176 None None 1 63639323 63639327 3 7 0 0 4 10 0 0 26 44 16 14 26 44 16 14 4 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 31 32 3.125 568699885 5 34 39 12.82051282 568699885 16 48 64 25 2 568701135 V|2.17.7|04_01_13 PD9777b D 4 71218858 71218858 1 t 600 36 538.0700073 None None 8 71218857 71218866 5 5 0 0 8 7 0 0 47 27 16 28 47 27 16 28 8 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 17 20 15 568701135 4 19 23 17.39130435 568701135 17 64 81 20.98765432 2 568701307 V|2.17.7|04_01_13 PD9777b D 4 72398001 72398001 1 t 689 49 645.0819702 None None 8 72398000 72398009 6 6 0 0 8 8 0 0 28 27 12 13 28 27 12 13 8 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 31 33 6.060606061 568701307 1 33 34 2.941176471 568701307 17 52 69 24.63768116 2 568701498 V|2.17.7|04_01_13 PD9777b D 4 73526061 73526061 1 c 780 54 699.4910278 None None 3 73526060 73526064 8 5 0 0 10 12 0 0 27 42 12 21 27 42 12 21 10 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 25 30 16.66666667 568701498 3 20 23 13.04347826 568701498 23 42 65 35.38461538 3 568702269 V|2.17.7|04_01_13 PD9777b D 4 79049242 79049242 1 t 257 40 590.0709839 None None 6 79049241 79049248 4 7 0 0 2 7 0 0 20 31 10 10 22 31 10 10 4 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 20 23 13.04347826 568702269 3 28 31 9.677419355 568702269 10 41 51 19.60784314 2 568702682 V|2.17.7|04_01_13 PD9777b D 4 82170349 82170349 1 a 817 63 753.2979736 None None 9 82170348 82170358 8 6 0 0 9 9 0 0 35 29 19 14 35 29 19 14 9 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 32 35 8.571428571 568702682 5 32 37 13.51351351 568702682 16 59 75 21.33333333 2 568703132 V|2.17.7|04_01_13 PD9777b D 4 84581774 84581774 1 a 780 54 698.8889771 None None 9 84581773 84581783 5 8 0 0 8 11 0 0 27 33 21 16 27 33 21 16 8 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 30 33 9.090909091 568703132 5 38 43 11.62790698 568703132 21 55 76 27.63157895 2 568708952 V|2.17.7|04_01_13 PD9777b D 4 131930389 131930389 1 a 509 28 484.2630005 None None 8 131930388 131930397 6 3 0 0 8 6 0 0 24 19 16 22 24 19 16 22 8 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 28 28 0 568708952 0 31 31 0 568708952 15 39 54 27.77777778 1 568709861 V|2.17.7|04_01_13 PD9777b D 4 138565971 138565971 1 a 540 28 484.2630005 None None 9 138565970 138565980 6 3 0 0 8 4 0 0 24 19 15 23 24 19 15 23 8 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 22 26 15.38461538 568709861 1 21 22 4.545454545 568709861 13 39 52 25 2 568714521 V|2.17.7|04_01_13 PD9777b D 4 172520002 172520002 1 a 600 27 538.0700073 None None 9 172520001 172520011 2 8 0 0 4 11 0 0 17 29 16 19 17 29 16 19 4 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 31 32 3.125 568714521 3 21 24 12.5 568714521 14 43 57 24.56140351 2 568715479 V|2.17.7|04_01_13 PD9777b D 4 178835197 178835197 1 t 660 42 591.8770142 None None 1 178835196 178835198 5 6 0 0 8 8 0 0 23 24 6 17 23 24 6 17 8 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 18 20 10 568715479 5 25 30 16.66666667 568715479 16 28 44 36.36363636 2 568721832 V|2.17.7|04_01_13 PD9777b I 4 69949864 69949865 1 T 449 9 425.6400146 None None 6 69949858 69949865 0 8 0 0 5 13 0 0 30 30 22 16 30 30 22 17 5 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 26 30 13.33333333 568721832 4 38 42 9.523809524 568721832 18 33 51 35.29411765 2 568722498 V|2.17.7|04_01_13 PD9777b I 4 74957267 74957268 4 CAGG 689 13 616.7849731 None None 1 74957267 74957273 12 0 0 0 13 9 0 0 50 38 16 17 50 38 16 18 13 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 29 32 9.375 568722498 7 33 40 17.5 568722498 25 83 108 23.14814815 2 568723901 V|2.17.7|04_01_13 PD9777b I 4 86052905 86052906 1 T 269 6 266.0249939 None None 7 86052905 86052913 5 0 0 0 6 8 0 0 41 39 22 23 41 39 22 23 6 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 30 34 11.76470588 568723901 6 42 48 12.5 568723901 14 64 78 17.94871795 2 568729681 V|2.17.7|04_01_13 PD9777b I 4 140021822 140021823 1 A 420 8 372.4349976 None None 8 140021814 140021823 0 7 0 0 10 9 0 0 20 33 13 21 20 33 13 21 10 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 22 22 0 568729681 4 33 37 10.81081081 568729681 18 24 42 42.85714286 2 568736542 V|2.17.7|04_01_13 PD9777b D 12 37858304 37858304 1 a 600 35 539.1359863 None None 2 37858303 37858306 4 6 0 0 7 9 0 0 25 26 9 20 25 26 9 20 7 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 18 21 14.28571429 568736542 5 30 35 14.28571429 568736542 16 31 47 34.04255319 NA 568736623 V|2.17.7|04_01_13 PD9777b D 12 38271544 38271544 1 t 420 18 377.3959961 None None 9 38271543 38271553 2 5 0 0 6 9 0 0 29 27 17 10 29 27 17 10 6 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 19 34 53 35.8490566 568736623 17 24 41 41.46341463 568736623 32 54 86 37.20930233 3 568739231 V|2.17.7|04_01_13 PD9777b D 12 55768701 55768713 13 aatggtttagtca 319 40 593.0499878 None None 1 55768700 55768714 7 4 0 0 8 4 0 0 29 28 20 19 29 28 20 19 8 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 17 19 10.52631579 568739231 5 28 33 15.15151515 568739231 14 34 48 29.16666667 2 568741433 V|2.17.7|04_01_13 PD9777b D 12 70836456 70836456 1 t 600 36 539.1359863 None None 3 70836455 70836459 5 5 0 0 7 6 0 0 29 30 17 8 29 30 17 8 7 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 30 34 11.76470588 568741433 3 19 22 13.63636364 568741433 13 36 49 26.53061224 2 568741474 V|2.17.7|04_01_13 PD9777b D 12 71086253 71086256 4 tggt 418 24 431.3089905 None None 1 71086252 71086259 5 3 0 0 7 3 0 0 41 25 18 15 41 25 18 15 7 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 26 30 13.33333333 568741474 6 22 28 21.42857143 568741474 12 51 63 19.04761905 2 568742516 V|2.17.7|04_01_13 PD9777b D 12 78344001 78344001 1 t 660 42 593.0499878 None None 1 78344000 78344002 5 6 0 0 8 7 0 0 31 29 15 17 31 29 15 17 8 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 21 25 16 568742516 1 37 38 2.631578947 568742516 15 38 53 28.30188679 2 568742895 V|2.17.7|04_01_13 PD9777b D 12 81472426 81472430 5 tccca 468 63 754.7910156 None None 1 81472425 81472432 8 6 0 0 8 6 0 0 28 32 12 14 28 32 12 14 8 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 29 35 17.14285714 568742895 4 16 20 20 568742895 15 41 56 26.78571429 2 568745278 V|2.17.7|04_01_13 PD9777b D 12 97413417 97413428 12 taaataaataaa 232 25 431.3089905 None None 6 97413416 97413444 4 4 0 0 5 5 0 0 34 23 16 14 34 23 16 14 5 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 17 19 10.52631579 568745278 6 25 31 19.35483871 568745278 22 28 50 44 3 568747359 V|2.17.7|04_01_13 PD9777b D 12 113739676 113739676 1 a 660 40 593.0499878 None None 2 113739675 113739678 7 4 0 0 8 8 0 0 26 30 15 22 26 30 15 22 8 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 21 25 16 568747359 4 16 20 20 568747359 16 34 50 32 2 568749635 V|2.17.7|04_01_13 PD9777b D 12 127509679 127509718 40 caatg<30>aacaa 377 56 697.8670044 None None 1 127509678 127509721 6 7 0 0 4 3 0 0 30 18 11 26 32 22 11 26 6 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 18 18 0 568749635 0 16 16 0 568749635 10 21 31 32.25806452 1 568751844 V|2.17.7|04_01_13 PD9777b I 12 39977037 39977038 1 A 329 7 319.2669983 None None 6 39977031 39977038 0 6 0 0 6 9 0 0 25 42 18 13 25 42 18 13 6 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 31 31 0 568751844 0 29 29 0 568751844 15 45 60 25 1 568752143 V|2.17.7|04_01_13 PD9777b I 12 42320893 42320894 1 A 420 8 373.1809998 None None 6 42320893 42320900 7 0 0 0 8 4 0 0 34 31 15 23 35 34 15 23 8 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 36 42 14.28571429 568752143 7 37 44 15.90909091 568752143 12 58 70 17.14285714 2 568756267 V|2.17.7|04_01_13 PD9777b I 12 75782764 75782765 1 A 540 10 479.8039856 None None 8 75782764 75782773 9 0 0 0 11 7 0 0 37 30 13 21 37 31 13 21 11 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 22 26 15.38461538 568756267 7 39 46 15.2173913 568756267 18 55 73 24.65753425 2 568757017 V|2.17.7|04_01_13 PD9777b I 12 81946808 81946809 1 T 420 8 372.57901 None None 9 81946799 81946809 0 7 0 0 6 10 0 0 32 30 20 17 32 30 20 17 6 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 15 17 11.76470588 568757017 5 25 30 16.66666667 568757017 18 38 56 32.14285714 2 568758164 V|2.17.7|04_01_13 PD9777b I 12 91966331 91966332 1 A 660 12 586.427002 None None 7 91966324 91966332 0 11 0 0 13 11 0 0 37 37 20 22 37 37 20 22 13 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 31 38 18.42105263 568758164 2 25 27 7.407407407 568758164 27 39 66 40.90909091 3 568759192 V|2.17.7|04_01_13 PD9777b I 12 99718579 99718580 1 T 300 6 266.5580139 None None 9 99718570 99718580 0 5 0 0 8 9 0 0 39 29 24 19 41 30 25 20 8 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 38 40 5 568759192 3 23 26 11.53846154 568759192 18 44 62 29.03225806 2 568760627 V|2.17.7|04_01_13 PD9777b I 12 113660113 113660114 1 A 420 8 372.57901 None None 1 113660112 113660114 0 7 0 0 9 12 0 0 39 37 20 15 40 38 20 15 9 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 29 34 14.70588235 568760627 3 12 15 20 568760627 21 48 69 30.43478261 2 568767779 V|2.17.7|04_01_13 PD9777b D 15 48751149 48751149 1 c 960 72 863.1950073 None None 1 48751148 48751150 11 5 0 0 12 5 0 0 35 26 19 14 35 26 19 14 12 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 24 24 0 568767779 2 35 37 5.405405405 568767779 19 39 58 32.75862069 2 568768315 V|2.17.7|04_01_13 PD9777b D 15 52333379 52333386 8 tttgtttt 348 40 647.8480225 None None 4 52333378 52333411 9 3 0 0 11 4 0 0 45 27 16 17 45 27 16 17 11 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 27 28 3.571428571 568768315 5 18 23 21.73913043 568768315 18 51 69 26.08695652 2 568770730 V|2.17.7|04_01_13 PD9777b D 15 66472152 66472152 1 c 757 54 701.835022 None None 7 66472151 66472159 8 5 0 0 14 8 0 0 44 26 17 13 44 26 17 13 14 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 12 13 7.692307692 568770730 2 19 21 9.523809524 568770730 22 61 83 26.5060241 2 568770918 V|2.17.7|04_01_13 PD9777b D 15 67476643 67476643 1 t 869 60 809.2069702 None None 2 67476642 67476645 11 4 0 0 16 4 0 0 42 23 17 13 42 23 17 13 16 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 31 38 18.42105263 568770918 4 10 14 28.57142857 568770918 20 36 56 35.71428571 3 568773735 V|2.17.7|04_01_13 PD9777b D 15 87269220 87269220 1 a 960 65 863.1950073 None None 8 87269219 87269228 4 12 0 0 9 14 0 0 35 38 13 26 35 38 13 26 9 14 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 33 37 10.81081081 568773735 5 53 58 8.620689655 568773735 23 70 93 24.7311828 2 568780728 V|2.17.7|04_01_13 PD9777b I 15 53390584 53390585 1 T 480 9 426.480011 None None 9 53390584 53390594 8 0 0 0 13 4 0 0 32 28 13 25 32 28 13 25 13 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 28 30 6.666666667 568780728 6 44 50 12 568780728 16 47 63 25.3968254 2 568780743 V|2.17.7|04_01_13 PD9777b I 15 53521675 53521676 1 T 720 13 639.4190063 None None 7 53521675 53521683 12 0 0 0 15 8 0 0 45 27 19 16 46 27 19 16 15 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 40 46 13.04347826 568780743 5 34 39 12.82051282 568780743 25 66 91 27.47252747 2 568780905 V|2.17.7|04_01_13 PD9777b I 15 54695756 54695757 1 A 457 9 427.0820007 None None 7 54695749 54695757 0 8 0 0 5 10 0 0 34 37 7 15 35 37 9 15 5 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 24 28 14.28571429 568780905 6 21 27 22.22222222 568780905 16 46 62 25.80645161 2 568781664 V|2.17.7|04_01_13 PD9777b I 15 59742898 59742899 3 AAC 689 13 626.1729736 None None 4 59742898 59742913 12 0 0 0 11 5 0 0 40 38 16 17 41 38 16 18 12 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 37 40 7.5 568781664 2 28 30 6.666666667 568781664 22 57 79 27.84810127 2 568784361 V|2.17.7|04_01_13 PD9777b I 15 80062934 80062935 1 G 480 9 425.8779907 None None 7 80062927 80062935 0 8 0 0 10 9 0 0 28 26 12 15 28 26 12 15 10 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 31 31 0 568784361 4 23 27 14.81481481 568784361 20 30 50 40 2 568784747 V|2.17.7|04_01_13 PD9777b I 15 84017864 84017865 1 T 397 8 373.696991 None None 7 84017864 84017872 7 0 0 0 13 8 0 0 41 37 18 17 41 37 18 17 13 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 23 25 8 568784747 3 29 32 9.375 568784747 20 61 81 24.69135802 2 568788005 V|2.17.7|04_01_13 PD9777b D 8 53466297 53466301 5 taaag 509 30 483.7909851 None None 1 53466296 53466304 5 4 0 0 8 4 0 0 31 43 9 15 31 43 9 15 8 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 27 32 15.625 568788005 4 33 37 10.81081081 568788005 15 50 65 23.07692308 2 568789234 V|2.17.7|04_01_13 PD9777b D 8 61960112 61960112 1 c 311 24 484.3930054 None None 1 61960111 61960113 2 7 0 0 4 9 0 0 38 50 19 15 38 50 19 15 4 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 25 30 16.66666667 568789234 3 34 37 8.108108108 568789234 18 63 81 22.22222222 2 568789345 V|2.17.7|04_01_13 PD9777b D 8 62762939 62762939 1 c 766 60 753.5 None None 3 62762938 62762942 9 5 0 0 11 6 0 0 45 41 15 13 45 41 15 13 11 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 30 34 11.76470588 568789345 6 16 22 27.27272727 568789345 17 67 84 20.23809524 2 568791270 V|2.17.7|04_01_13 PD9777b D 8 77383470 77383470 1 t 666 33 645.2550049 None None 9 77383469 77383479 10 2 0 0 13 3 0 0 33 34 9 17 33 34 9 17 13 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 32 35 8.571428571 568791270 5 33 38 13.15789474 568791270 14 58 72 19.44444444 2 568792004 V|2.17.7|04_01_13 PD9777b D 8 83280633 83280633 1 a 780 56 699.6790161 None None 1 83280632 83280634 7 6 0 0 10 10 0 0 44 48 16 21 44 48 16 21 10 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 25 28 10.71428571 568792004 5 38 43 11.62790698 568792004 22 66 88 25 2 568792104 V|2.17.7|04_01_13 PD9777b D 8 84063120 84063120 1 t 840 63 753.5 None None 8 84063119 84063128 6 8 0 0 8 9 0 0 40 50 15 19 40 50 15 19 8 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 31 35 11.42857143 568792104 4 33 37 10.81081081 568792104 18 88 106 16.98113208 2 568792280 V|2.17.7|04_01_13 PD9777b D 8 85199868 85199868 1 a 540 30 484.3930054 None None 8 85199867 85199876 5 4 0 0 6 6 0 0 31 41 20 18 31 41 20 18 6 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 32 40 20 568792280 6 41 47 12.76595745 568792280 15 65 80 18.75 2 568793314 V|2.17.7|04_01_13 PD9777b D 8 93120377 93120377 1 g 300 10 269.1069946 None None 4 93120376 93120381 1 4 0 0 2 5 0 0 57 49 17 16 57 49 17 16 2 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 38 42 9.523809524 568793314 5 39 44 11.36363636 568793314 7 94 101 6.930693069 2 568794294 V|2.17.7|04_01_13 PD9777b D 8 99596322 99596322 1 t 494 24 484.3930054 None None 9 99596321 99596331 2 7 0 0 4 11 0 0 51 59 19 11 51 59 19 11 4 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 30 35 14.28571429 568794294 4 46 50 8 568794294 17 101 118 14.40677966 2 568795197 V|2.17.7|04_01_13 PD9777b D 8 105854696 105854696 1 t 780 50 699.6790161 None None 8 105854695 105854704 4 9 0 0 13 11 0 0 59 51 20 26 59 51 20 26 13 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 41 46 10.86956522 568795197 3 41 44 6.818181818 568795197 23 95 118 19.49152542 2 568797059 V|2.17.7|04_01_13 PD9777b D 8 118458581 118458582 2 ct 960 77 861.1430054 None None 1 118458580 118458584 10 6 0 0 15 9 0 0 83 61 15 15 83 61 15 15 15 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 44 48 8.333333333 568797059 1 62 63 1.587301587 568797059 25 103 128 19.53125 2 568797120 V|2.17.7|04_01_13 PD9777b D 8 118951284 118951284 1 t 660 40 592.0360107 None None 9 118951283 118951293 7 4 0 0 12 8 0 0 49 40 15 17 49 40 15 17 12 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 31 34 8.823529412 568797120 8 42 50 16 568797120 22 81 103 21.3592233 3 568798826 V|2.17.7|04_01_13 PD9777b D 8 130612436 130612436 1 t 840 63 753.5 None None 7 130612435 130612443 8 6 0 0 15 11 0 0 35 47 18 16 35 47 18 16 15 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 42 45 6.666666667 568798826 2 39 41 4.87804878 568798826 26 76 102 25.49019608 2 568799329 V|2.17.7|04_01_13 PD9777b D 8 134215233 134215247 15 aagct<5>cagca 406 55 752.2960205 None None 1 134215232 134215248 4 10 0 0 4 10 0 0 25 50 15 15 25 50 15 15 4 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 19 24 20.83333333 568799329 1 8 9 11.11111111 568799329 16 45 61 26.2295082 3 568802309 V|2.17.7|04_01_13 PD9777b I 8 49364250 49364251 1 G 480 9 425.1530151 None None 8 49364242 49364251 0 8 0 0 6 9 0 0 39 60 14 13 39 60 14 13 6 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 11 11 0 568802309 6 34 40 15 568802309 16 67 83 19.27710843 2 568802473 V|2.17.7|04_01_13 PD9777b I 8 51137548 51137549 1 T 840 15 745.0720215 None None 9 51137539 51137549 0 14 0 0 13 18 0 0 47 47 16 21 47 47 17 22 13 18 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 15 23 34.7826087 568802473 7 22 29 24.13793103 568802473 33 38 71 46.47887324 3 568803053 V|2.17.7|04_01_13 PD9777b I 8 55353281 55353282 1 T 480 9 425.7550049 None None 9 55353281 55353291 8 0 0 0 10 10 0 0 45 50 21 19 45 51 21 19 10 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 45 52 13.46153846 568803053 4 46 50 8 568803053 20 73 93 21.50537634 2 568804221 V|2.17.7|04_01_13 PD9777b I 8 65369067 65369068 1 C 480 9 425.7550049 None None 1 65369066 65369068 0 8 0 0 5 16 0 0 35 58 12 29 35 58 12 29 5 16 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 42 43 2.325581395 568804221 7 30 37 18.91891892 568804221 21 63 84 25 2 568806381 V|2.17.7|04_01_13 PD9777b I 8 85782717 85782718 1 T 300 6 266.0969849 None None 8 85782717 85782726 5 0 0 0 6 7 0 0 32 48 14 24 33 48 14 24 6 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 41 45 8.888888889 568806381 4 36 40 10 568806381 13 71 84 15.47619048 2 568806753 V|2.17.7|04_01_13 PD9777b I 8 89189161 89189162 1 A 480 9 425.7550049 None None 7 89189154 89189162 0 8 0 0 6 9 0 0 36 48 13 18 37 50 13 18 6 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 35 38 7.894736842 568806753 7 50 57 12.28070175 568806753 14 54 68 20.58823529 2 568808692 V|2.17.7|04_01_13 PD9777b I 8 107144956 107144957 1 T 480 9 425.7550049 None None 5 107144951 107144957 0 8 0 0 7 12 0 0 54 61 17 15 54 61 17 15 7 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 43 46 6.52173913 568808692 6 48 54 11.11111111 568808692 21 82 103 20.38834951 2 568808756 V|2.17.7|04_01_13 PD9777b I 8 107658865 107658866 1 G 420 8 371.9339905 None None 2 107658865 107658868 7 0 0 0 7 9 0 0 38 61 19 14 39 62 19 14 7 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 27 30 10 568808756 6 39 45 13.33333333 568808756 16 75 91 17.58241758 2 568809223 V|2.17.7|04_01_13 PD9777b I 8 111243365 111243366 1 A 360 7 319.3160095 None None 7 111243365 111243373 6 0 0 0 11 9 0 0 55 58 14 15 57 59 14 16 11 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 9 45 54 16.66666667 568809223 6 37 43 13.95348837 568809223 20 86 106 18.86792453 3 568809397 V|2.17.7|04_01_13 PD9777b I 8 112781960 112781961 1 A 960 17 851.5100098 None None 9 112781960 112781970 16 0 0 0 30 19 0 0 58 42 23 8 58 42 24 8 30 19 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 32 37 13.51351351 568809397 16 51 67 23.88059701 568809397 50 87 137 36.49635036 2 568809464 V|2.17.7|04_01_13 PD9777b I 8 113419609 113419610 1 T 420 8 372.5360107 None None 8 113419601 113419610 0 7 0 0 8 9 0 0 55 48 14 16 55 48 14 16 8 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 40 43 6.976744186 568809464 8 44 52 15.38461538 568809464 17 73 90 18.88888889 2 568811600 V|2.17.7|04_01_13 PD9777b I 8 131297569 131297570 1 A 1200 21 1063.180054 None None 9 131297569 131297579 20 0 0 0 33 25 0 0 61 52 18 11 62 53 18 11 33 25 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 11 37 48 22.91666667 568811600 18 45 63 28.57142857 568811600 61 89 150 40.66666667 2 568822865 V|2.17.7|04_01_13 PD9777b I 16 11858629 11858630 1 G 660 12 589.0869751 None None 8 11858629 11858638 11 0 0 0 13 23 0 0 46 61 17 11 47 61 17 11 13 23 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 34 38 10.52631579 568822865 5 39 44 11.36363636 568822865 42 93 135 31.11111111 3 568823681 V|2.17.7|04_01_13 PD9777b I 16 17892449 17892450 1 G 389 8 375.2569885 None None 8 17892449 17892458 7 0 0 0 7 4 0 0 52 40 18 17 52 40 19 18 7 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 35 41 14.63414634 568823681 10 38 48 20.83333333 568823681 14 81 95 14.73684211 2 568824700 V|2.17.7|04_01_13 PD9777b I 16 26667470 26667471 1 T 360 7 321.6489868 None None 6 26667470 26667477 6 0 0 0 10 6 0 0 42 31 20 20 42 32 20 20 10 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 35 38 7.894736842 568824700 5 33 38 13.15789474 568824700 16 59 75 21.33333333 2 568824701 V|2.17.7|04_01_13 PD9777b I 16 26667476 26667477 1 T 360 12 321.6489868 None None 0 26667476 26667479 1 5 0 0 1 0 0 0 42 30 18 20 42 30 18 20 1 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 31 34 8.823529412 568824701 5 33 38 13.15789474 568824701 16 49 65 24.61538462 2 568831388 V|2.17.7|04_01_13 PD9777b D 7 35558281 35558281 1 c 900 70 811.7020264 None None 2 35558280 35558283 6 9 0 0 9 12 0 0 33 42 18 15 33 42 18 15 9 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 30 33 9.090909091 568831388 5 30 35 14.28571429 568831388 23 45 68 33.82352941 2 568831446 V|2.17.7|04_01_13 PD9777b D 7 35911577 35911579 3 tgt 360 15 324.6809998 None None 2 35911576 35911584 2 4 0 0 3 5 0 0 25 19 19 16 25 19 19 16 3 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 28 31 9.677419355 568831446 7 37 44 15.90909091 568831446 10 30 40 25 2 568831785 V|2.17.7|04_01_13 PD9777b D 7 37807130 37807130 1 a 480 24 432.9079895 None None 1 37807129 37807131 3 5 0 0 4 10 0 0 23 27 14 22 23 27 14 22 4 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 29 32 9.375 568831785 2 32 34 5.882352941 568831785 14 31 45 31.11111111 2 568833231 V|2.17.7|04_01_13 PD9777b D 7 48095040 48095043 4 tact 778 63 756.3850098 None None 1 48095039 48095047 6 8 0 0 7 9 0 0 23 30 13 20 23 30 13 20 8 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 29 29 0 568833231 0 29 29 0 568833231 17 32 49 34.69387755 1 568833304 V|2.17.7|04_01_13 PD9777b D 7 48671281 48671281 1 t 480 21 432.9079895 None None 9 48671280 48671290 2 6 0 0 5 9 0 0 28 27 12 16 28 27 12 16 5 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 29 29 0 568833304 0 35 35 0 568833304 13 48 61 21.31147541 1 568834010 V|2.17.7|04_01_13 PD9777b D 7 53043617 53043617 1 t 660 42 595.2479858 None None 8 53043616 53043625 5 6 0 0 9 8 0 0 36 24 16 17 36 24 16 17 9 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 35 40 12.5 568834010 7 43 50 14 568834010 17 54 71 23.94366197 2 568836122 V|2.17.7|04_01_13 PD9777b I 7 1919533 1919534 1 T 306 7 321.0690002 None None 5 1919533 1919539 6 0 0 0 8 8 0 0 25 28 22 15 25 28 22 15 8 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 12 30 42 28.57142857 568836122 4 7 11 36.36363636 568836122 24 46 70 34.28571429 3 568837238 V|2.17.7|04_01_13 PD9777b I 7 10072345 10072346 1 A 360 7 321.0690002 None None 6 10072339 10072346 0 6 0 0 4 7 0 0 24 33 17 14 24 34 17 14 4 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 28 33 15.15151515 568837238 5 26 31 16.12903226 568837238 11 40 51 21.56862745 2 568842325 V|2.17.7|04_01_13 PD9777b I 7 50505758 50505759 1 T 660 12 588.6259766 None None 5 50505758 50505764 11 0 0 0 15 8 0 0 47 41 15 16 47 42 15 16 15 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 40 45 11.11111111 568842325 4 29 33 12.12121212 568842325 25 79 104 24.03846154 2 568843299 V|2.17.7|04_01_13 PD9777b I 7 56739954 56739955 1 T 420 8 373.9779968 None None 8 56739954 56739963 7 0 0 0 10 5 0 0 21 26 11 15 21 26 11 15 10 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 31 36 13.88888889 568843299 1 32 33 3.03030303 568843299 15 42 57 26.31578947 2 568846646 V|2.17.7|04_01_13 PD9777b D 2 118111588 118111590 3 ttg 540 30 483.6719971 None None 2 118111587 118111594 4 5 0 0 6 5 0 0 28 36 24 26 28 36 24 26 6 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 12 17 29.41176471 568846646 3 30 33 9.090909091 568846646 15 45 60 25 2 568849191 V|2.17.7|04_01_13 PD9777b D 2 135344980 135344983 4 aaac 869 72 806.1199951 None None 2 135344979 135344991 7 8 0 0 7 10 0 0 27 34 17 22 27 34 17 22 7 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 31 35 11.42857143 568849191 4 24 28 14.28571429 568849191 17 35 52 32.69230769 2 568852002 V|2.17.7|04_01_13 PD9777b D 2 156440380 156440380 1 g 600 35 536.8109741 None None 6 156440379 156440386 6 4 0 0 8 5 0 0 27 22 18 12 27 22 18 12 8 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 9 10 10 568852002 3 18 21 14.28571429 568852002 14 43 57 24.56140351 2 568854424 V|2.17.7|04_01_13 PD9777b D 2 173022221 173022221 1 a 697 40 644.8959961 None None 8 173022220 173022229 3 9 0 0 9 13 0 0 34 41 11 19 34 41 11 19 9 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 27 30 10 568854424 2 25 27 7.407407407 568854424 21 67 88 23.86363636 2 568857610 V|2.17.7|04_01_13 PD9777b D 2 195961930 195961930 1 a 660 42 591.1550293 None None 9 195961929 195961939 6 5 0 0 10 6 0 0 31 36 17 13 31 36 17 13 10 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 28 30 6.666666667 568857610 0 30 30 0 568857610 17 62 79 21.51898734 2 568863488 V|2.17.7|04_01_13 PD9777b D 2 234115591 234115591 1 t 720 49 644.2940063 None None 1 234115590 234115592 6 6 0 0 9 9 0 0 32 31 17 14 32 31 17 14 9 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 26 30 13.33333333 568863488 0 13 13 0 568863488 18 37 55 32.72727273 2 568866658 V|2.17.7|04_01_13 PD9777b I 2 102268638 102268639 1 A 420 8 371.9750061 None None 7 102268638 102268646 7 0 0 0 8 7 0 0 27 30 17 9 27 30 17 9 8 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 36 44 18.18181818 568866658 5 29 34 14.70588235 568866658 13 44 57 22.80701754 2 568866946 V|2.17.7|04_01_13 PD9777b I 2 105074059 105074060 1 T 420 8 371.9750061 None None 9 105074059 105074069 7 0 0 0 9 9 0 0 22 27 14 16 23 28 14 16 9 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 28 32 12.5 568866946 4 32 36 11.11111111 568866946 19 45 64 29.6875 2 568868371 V|2.17.7|04_01_13 PD9777b I 2 117793008 117793009 1 C 360 7 318.8359985 None None 2 117793008 117793011 6 0 0 0 7 5 0 0 26 26 11 11 26 26 11 11 7 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 19 23 17.39130435 568868371 3 26 29 10.34482759 568868371 14 39 53 26.41509434 2 568869129 V|2.17.7|04_01_13 PD9777b I 2 124341590 124341591 1 T 238 6 265.6960144 None None 8 124341582 124341591 0 5 0 0 1 5 0 0 26 29 9 17 26 31 9 17 1 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 19 21 9.523809524 568869129 5 32 37 13.51351351 568869129 6 39 45 13.33333333 2 568869466 V|2.17.7|04_01_13 PD9777b I 2 127068692 127068693 2 AT 480 9 419.0939941 None None 6 127068679 127068693 0 8 0 0 3 12 0 0 31 30 13 25 31 30 13 25 3 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 27 32 15.625 568869466 6 32 38 15.78947368 568869466 17 32 49 34.69387755 2 568870531 V|2.17.7|04_01_13 PD9777b I 2 134404032 134404033 1 A 480 9 425.1140137 None None 8 134404024 134404033 0 8 0 0 8 9 0 0 31 43 17 13 31 43 17 13 8 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 27 33 18.18181818 568870531 5 31 36 13.88888889 568870531 21 51 72 29.16666667 2 568875856 V|2.17.7|04_01_13 PD9777b I 2 179109994 179109995 1 A 360 7 318.8359985 None None 7 179109994 179110002 6 0 0 0 8 5 0 0 32 32 13 25 32 32 13 25 8 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 26 32 18.75 568875856 1 30 31 3.225806452 568875856 14 58 72 19.44444444 2 568876083 V|2.17.7|04_01_13 PD9777b I 2 181116176 181116177 1 A 480 9 424.5119934 None None 8 181116176 181116185 8 0 0 0 8 2 0 0 33 26 21 16 34 26 22 16 8 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 32 37 13.51351351 568876083 4 18 22 18.18181818 568876083 12 41 53 22.64150943 2 568878379 V|2.17.7|04_01_13 PD9777b I 2 199914763 199914764 1 T 360 7 318.8359985 None None 7 199914763 199914771 6 0 0 0 7 7 0 0 37 27 27 12 37 28 27 13 7 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 31 33 6.060606061 568878379 10 40 50 20 568878379 17 55 72 23.61111111 2 568885077 V|2.17.7|04_01_13 PD9777b D 21 10543590 10543593 4 aaat 232 25 436.9240112 None None 1 10543589 10543595 4 4 0 0 4 3 0 0 45 70 35 39 45 71 35 39 4 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 68 75 9.333333333 568885077 3 78 81 3.703703704 568885077 9 91 100 9 2 568888556 V|2.17.7|04_01_13 PD9777b D 5 52515223 52515228 6 ttgctc 319 40 592.4110107 None None 1 52515222 52515232 4 7 0 0 7 8 0 0 16 20 20 17 16 20 20 17 7 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 26 29 10.34482759 568888556 4 25 29 13.79310345 568888556 18 15 33 54.54545455 2 568888589 V|2.17.7|04_01_13 PD9777b D 5 52733569 52733569 1 a 689 49 646.9229736 None None 5 52733568 52733574 6 6 0 0 7 8 0 0 17 24 16 11 17 24 16 11 7 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 30 30 0 568888589 0 21 21 0 568888589 15 35 50 30 1 568889321 V|2.17.7|04_01_13 PD9777b D 5 57612672 57612672 1 a 577 35 539.1030273 None None 9 57612671 57612681 4 6 0 0 7 7 0 0 20 25 14 16 20 25 14 16 7 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 15 16 6.25 568889321 2 24 26 7.692307692 568889321 14 38 52 26.92307692 2 568889941 V|2.17.7|04_01_13 PD9777b D 5 62721500 62721521 22 tatat<12>atacg 261 28 485.1929932 None None 1 62721499 62721540 6 3 0 0 3 2 0 0 17 18 15 15 20 19 15 15 6 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 7 11 18 38.88888889 568889941 2 24 26 7.692307692 568889941 12 16 28 42.85714286 2 568890596 V|2.17.7|04_01_13 PD9777b D 5 68335662 68335665 4 aaac 600 36 539.1030273 None None 1 68335661 68335669 5 5 0 0 9 7 0 0 28 29 17 21 28 29 17 21 9 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 20 25 20 568890596 10 20 30 33.33333333 568890596 19 30 49 38.7755102 2 568894573 V|2.17.7|04_01_13 PD9777b D 5 103773081 103773081 1 c 660 36 593.0130005 None None 2 103773080 103773083 8 3 0 0 12 3 0 0 28 10 11 11 28 10 11 11 12 3 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 27 31 12.90322581 568894573 4 26 30 13.33333333 568894573 16 20 36 44.44444444 2 568898160 V|2.17.7|04_01_13 PD9777b D 5 135328206 135328213 8 caagggct 348 45 646.9229736 None None 1 135328205 135328215 4 8 0 0 6 10 0 0 14 25 19 13 14 25 19 13 6 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 8 21 29 27.5862069 568898160 6 14 20 30 568898160 18 20 38 47.36842105 3 568901449 V|2.17.7|04_01_13 PD9777b D 5 164470430 164470430 1 t 297 70 808.6539917 None None 7 164470429 164470437 9 6 0 0 10 10 0 0 18 22 12 14 18 22 12 14 10 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 23 26 11.53846154 568901449 2 21 23 8.695652174 568901449 20 38 58 34.48275862 2 568918201 V|2.17.7|04_01_13 PD9777b D 20 1372612 1372614 3 aga 507 32 543.15802 None None 1 1372611 1372617 7 3 0 0 8 6 0 0 32 26 17 18 32 26 17 18 8 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 31 35 11.42857143 568918201 2 22 24 8.333333333 568918201 14 36 50 28 2 568924898 V|2.17.7|04_01_13 PD9777b I 20 15186858 15186859 1 A 989 18 913.5549927 None None 8 15186858 15186867 17 0 0 0 25 18 0 0 58 45 20 17 61 47 20 17 25 18 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 22 27 18.51851852 568924898 16 34 50 32 568924898 42 84 126 33.33333333 2 568925631 V|2.17.7|04_01_13 PD9777b I 20 20099810 20099811 1 T 480 9 430.1919861 None None 7 20099810 20099818 8 0 0 0 11 11 0 0 60 55 16 22 61 55 16 22 11 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 41 43 4.651162791 568925631 4 42 46 8.695652174 568925631 25 98 123 20.32520325 2 568932182 V|2.17.7|04_01_13 PD9777b DI 22 17950625 17950627 3 GC 569 27 0 None None 0 17950625 17950627 8 2 0 0 0 0 0 0 39 19 16 10 39 19 16 10 8 2 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 26 31 16.12903226 568932182 2 14 16 12.5 568932182 13 34 47 27.65957447 2 568932885 V|2.17.7|04_01_13 PD9777b I 22 17722537 17722538 4 ACGT 627 13 622.039978 None None 1 17722533 17722538 0 12 0 0 9 13 0 0 38 41 20 14 38 43 20 14 9 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 33 38 13.15789474 568932885 0 12 12 0 568932885 25 48 73 34.24657534 NA 568933284 V|2.17.7|04_01_13 PD9777b I 22 20828304 20828305 1 T 420 8 375.2489929 None None 8 20828296 20828305 0 7 0 0 3 10 0 0 32 38 22 23 32 38 23 23 3 10 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 33 39 15.38461538 568933284 3 17 20 15 568933284 14 41 55 25.45454545 2 568933628 V|2.17.7|04_01_13 PD9777b I 22 22810385 22810386 1 A 420 8 375.8510132 None None 7 22810385 22810393 7 0 0 0 9 7 0 0 34 39 12 15 34 40 15 15 9 7 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 31 35 11.42857143 568933628 7 42 49 14.28571429 568933628 16 64 80 20 2 568933933 V|2.17.7|04_01_13 PD9777b I 22 25214208 25214209 1 T 598 40 588.8170166 None None 0 25214208 25214209 4 7 0 0 6 8 0 0 33 32 18 17 34 32 18 17 6 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 17 20 37 45.94594595 568933933 14 17 31 45.16129032 568933933 41 40 81 50.61728395 3 568933951 V|2.17.7|04_01_13 PD9777b I 22 25386060 25386061 1 T 420 8 375.2489929 None None 7 25386060 25386068 7 0 0 0 11 5 0 0 48 24 16 11 49 25 16 11 11 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 26 31 16.12903226 568933951 1 34 35 2.857142857 568933951 19 63 82 23.17073171 NA 568939376 V|2.17.7|04_01_13 PD9777b D 19 10613133 10613135 3 ctt 418 21 434.4049988 None None 1 10613132 10613138 6 2 0 0 8 5 0 0 38 27 15 17 38 27 15 17 8 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 10 10 0 568939376 1 5 6 16.66666667 568939376 14 45 59 23.72881356 2 568941501 V|2.17.7|04_01_13 PD9777b D 19 20903241 20903244 4 tgtt 346 44 705.90802 None None 1 20903240 20903248 3 10 0 0 3 10 0 0 47 38 7 14 47 40 7 14 3 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 31 34 8.823529412 568941501 2 38 40 5 568941501 17 54 71 23.94366197 2 568944818 V|2.17.7|04_01_13 PD9777b I 19 13171904 13171905 1 C 300 6 267.8909912 None None 8 13171896 13171905 0 5 0 0 7 5 0 0 41 34 14 11 41 34 14 11 7 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 16 19 15.78947368 568944818 0 5 5 0 568944818 12 50 62 19.35483871 NA 568947376 V|2.17.7|04_01_13 PD9777b D 14 20920671 20920674 4 aaag 538 32 540.1389771 None None 2 20920670 20920679 3 7 0 0 5 8 0 0 29 30 15 18 29 30 15 18 5 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 1 30 31 3.225806452 568947376 4 22 26 15.38461538 568947376 15 36 51 29.41176471 2 568950674 V|2.17.7|04_01_13 PD9777b D 14 43253088 43253088 1 a 540 28 486.125 None None 6 43253087 43253094 3 6 0 0 5 8 0 0 15 26 14 13 15 26 14 13 5 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 0 26 26 0 568950674 4 28 32 12.5 568950674 15 40 55 27.27272727 2 568953041 V|2.17.7|04_01_13 PD9777b D 14 60858816 60858819 4 ctct 1138 117 1079.069946 None None 3 60858815 60858823 8 12 0 0 9 13 0 0 27 23 15 13 27 23 15 13 9 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 25 28 10.71428571 568953041 4 23 27 14.81481481 568953041 25 19 44 56.81818182 3 568961420 V|2.17.7|04_01_13 PD9777b I 14 28213063 28213064 1 A 300 6 266.4570007 None None 8 28213055 28213064 0 5 0 0 6 10 0 0 31 44 13 20 31 44 13 20 6 11 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 29 33 12.12121212 568961420 6 33 39 15.38461538 568961420 17 37 54 31.48148148 2 568961550 V|2.17.7|04_01_13 PD9777b I 14 28959050 28959051 1 A 449 9 426.6919861 None None 8 28959042 28959051 0 8 0 0 11 15 0 0 37 43 12 18 37 43 13 18 11 15 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 22 25 12 568961550 4 22 26 15.38461538 568961550 25 40 65 38.46153846 3 568962404 V|2.17.7|04_01_13 PD9777b I 14 35719742 35719743 7 GCCAGAC 377 14 647.3930054 None None 1 35719742 35719750 13 0 0 0 13 5 0 0 27 18 24 17 27 18 24 17 13 5 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 31 36 13.88888889 568962404 8 33 41 19.51219512 568962404 19 36 55 34.54545455 2 568963640 V|2.17.7|04_01_13 PD9777b I 14 46841620 46841621 1 T 300 6 267.0589905 None None 9 46841611 46841621 0 5 0 0 4 8 0 0 20 27 17 29 20 27 17 30 4 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 20 22 9.090909091 568963640 2 31 33 6.060606061 568963640 14 23 37 37.83783784 2 568968139 V|2.17.7|04_01_13 PD9777b I 14 86598186 86598187 1 A 360 7 320.4710083 None None 8 86598178 86598187 0 6 0 0 8 8 0 0 25 21 19 18 25 22 19 18 8 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 32 34 5.882352941 568968139 5 32 37 13.51351351 568968139 16 21 37 43.24324324 2 568971388 V|2.17.7|04_01_13 PD9777b D X 10216476 10216476 1 c 900 70 815.6090088 None None 1 10216475 10216477 6 9 0 0 7 13 0 0 20 29 11 20 20 29 11 20 7 13 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 22 27 18.51851852 568971388 7 22 29 24.13793103 568971388 21 27 48 43.75 2 568972915 V|2.17.7|04_01_13 PD9777b D X 28850868 28850868 1 a 809 39 760.0310059 None None 4 28850867 28850872 12 2 0 0 16 4 0 0 30 17 20 17 30 17 20 17 16 4 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 16 20 20 568972915 11 21 32 34.375 568972915 20 20 40 50 2 568973671 V|2.17.7|04_01_13 PD9777b D X 36483249 36483253 5 atttt 267 12 325.6409912 None None 5 36483248 36483277 1 5 0 0 3 9 0 0 16 25 17 16 16 25 17 16 3 9 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 14 16 12.5 568973671 3 19 22 13.63636364 568973671 13 24 37 35.13513514 2 568976780 V|2.17.7|04_01_13 PD9777b I X 19251434 19251435 1 T 360 7 322.631012 None None 7 19251434 19251442 6 0 0 0 8 6 0 0 22 19 17 21 22 19 17 21 8 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 5 28 33 15.15151515 568976780 7 33 40 17.5 568976780 17 35 52 32.69230769 2 568977914 V|2.17.7|04_01_13 PD9777b I X 33927839 33927840 1 T 360 7 322.631012 None None 7 33927839 33927847 6 0 0 0 10 6 0 0 25 25 13 17 26 25 13 17 10 6 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 25 28 10.71428571 568977914 8 26 34 23.52941176 568977914 18 41 59 30.50847458 2 568982710 V|2.17.7|04_01_13 PD9777b D 9 19800659 19800659 1 t 600 35 542.164978 None None 9 19800658 19800668 6 4 0 0 8 8 0 0 27 27 11 16 27 27 11 16 8 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 23 26 11.53846154 568982710 6 28 34 17.64705882 568982710 19 49 68 27.94117647 2 568989200 V|2.17.7|04_01_13 PD9777b I 9 22576760 22576761 1 A 300 6 268.071991 None None 9 22576751 22576761 0 5 0 0 7 12 0 0 19 24 12 16 19 24 12 16 7 12 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 15 21 28.57142857 568989200 4 20 24 16.66666667 568989200 20 19 39 51.28205128 3 568992315 V|2.17.7|04_01_13 PD9777b D 10 3818926 3818926 1 g 269 6 270.5150146 None None 1 3818925 3818927 5 0 0 0 7 1 0 0 79 54 16 13 79 54 16 13 7 1 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 6 22 28 21.42857143 568992315 2 40 42 4.761904762 568992315 6 95 101 5.940594059 2 568995083 V|2.17.7|04_01_13 PD9777b D 10 16595120 16595120 1 a 1440 165 1297.27002 None None 9 16595119 16595129 10 14 0 0 18 27 0 0 67 90 17 28 67 90 17 28 18 27 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 3 45 48 6.25 568995083 7 42 49 14.28571429 568995083 47 142 189 24.86772487 2 569003116 V|2.17.7|04_01_13 PD9777b I 10 23777391 23777392 1 T 480 9 427.4049988 None None 6 23777391 23777398 8 0 0 0 11 8 0 0 47 47 26 15 47 47 26 15 11 8 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 2 35 37 5.405405405 569003116 6 36 42 14.28571429 569003116 19 86 105 18.0952381 2 569004457 V|2.17.7|04_01_13 PD9777b I 10 32682143 32682144 1 T 780 14 695.5109863 None None 4 32682139 32682144 0 13 0 0 9 14 0 0 27 40 19 15 29 40 19 15 9 14 0 0 1 1 1 1 1 1 1 1 YES CLEAN HIGH_CONF NON_CODING HIGH_CONF 4 30 34 11.76470588 569004457 3 31 34 8.823529412 569004457 23 39 62 37.09677419 2