X.AnalysisProc	Normal	VariantID	Chrom	Pos	Ref	Alt	Gene	Transcript	RNA	CDS	Protein	Effect	DIS_sample_PD9772b_depth	DIS_MtAll_PD9772b	DIS_MtAllPct_PD9772b	DIS_sample_PD9772a2_depth	DIS_MtAll_PD9772a2	DIS_MtAllPct_PD9772a2	VAL_sample_PD9772b_depth	VAL_MtAll_PD9772b	VAL_MtAllPct_PD9772b	VAL_sample_PD9772a2_depth	VAL_MtAll_PD9772a2	VAL_MtAllPct_PD9772a2							subclonal.CN	nMaj1	nMin1	frac1	nMaj2	nMin2	frac2	phase	mutation.copy.number	subclonal.fraction	no.chrs.bearing.mut	prob.cluster1	prob.cluster2	prob.cluster3	prob.cluster4	prob.cluster5	prob.cluster6	prob.cluster7	most.likely.cluster	pbinom_dis_a2	pbinom_dis_b	pbinom_val_a2	pbinom_val_b	VAL_LOCUS	val_status_a2	current.conf.status
1353824	PD9772b	1215834376	1	561663	C	A	AL669831.1	ENST00000503254	r.?	-	-	intronic	10	0	0	21	8	38.0952381	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.795165963	0.795165963	1	0	0.00625	0.99375	0	0	0	0	3	7.50E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215834860	1	3069307	G	A	PRDM16	CCDS44048.1	r.?	-	-	intronic	34	0	0	8	6	75	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	1.56548299	1.56548299	1	0	0	1	0	0	0	0	3	4.34E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215834882	1	3413019	G	A	MEGF6	CCDS41237.1	r.?	-	-	intronic	48	0	0	8	4	50	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	1.043655326	1.043655326	1	0	0.00875	0.99125	0	0	0	0	3	4.31E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215835004	1	4906649	G	A	-	-	-	-	-	-	31	0	0	76	29	38.15789474	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.796473802	0.796473802	1	0	0.0025	0.9975	0	0	0	0	3	1.22E-46	1	1	1	NA	NA	NA
1353824	PD9772b	1215835359	1	7176903	G	A	CAMTA1	CCDS30576.1	r.?	-	-	intronic	27	0	0	9	4	44.44444444	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.927693623	0.927693623	1	0	0.0125	0.9875	0	0	0	0	3	7.72E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215835667	1	9688145	G	A	-	-	-	-	-	-	38	0	0	11	4	36.36363636	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.759022056	0.759022056	1	0.00125	0.03	0.96875	0	0	0	0	3	2.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215835734	1	10157257	C	A	UBE4B	CCDS41245.1	r.?	-	-	intronic	20	0	0	66	13	19.6969697	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.411136947	0.411136947	1	0.0775	0.895	0.0275	0	0	0	0	2	1.95E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215835738	1	10210995	G	A	UBE4B	CCDS41245.1	r.?	-	-	intronic	21	0	0	16	6	37.5	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.782741495	0.782741495	1	0	0.025	0.975	0	0	0	0	3	1.20E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215835775	1	10436073	C	A	KIF1B	CCDS111.1	r.?	-	-	intronic	27	0	0	55	4	7.272727273	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.151804411	1.038801523	0.146134182	0	0.01125	0.98875	0	0	0	0	3	0.000173903	1	1	1	NA	NA	NA
1353824	PD9772b	1215835819	1	10914689	C	A	-	-	-	-	-	-	34	0	0	48	11	22.91666667	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.478342025	0.478342025	1	0.04125	0.75125	0.2075	0	0	0	0	2	9.31E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215835910	1	11731281	G	A	MAD2L2	CCDS134.1	r.?	-	-	downstream	32	0	0	18	7	38.88888889	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.811731921	0.811731921	1	0	0.01625	0.98375	0	0	0	0	3	2.37E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215837201	1	18255992	C	A	-	-	-	-	-	-	43	0	0	64	11	17.1875	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.358756518	0.358756518	1	0.22125	0.77625	0.0025	0	0	0	0	2	2.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215837432	1	20208717	C	A	OTUD3	CCDS41279.1	r.?	-	-	upstream	25	0	0	35	8	22.85714286	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.477099578	0.477099578	1	0.03375	0.49	0.47625	0	0	0	0	2	8.15E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215837450	1	20329736	C	A	-	-	-	-	-	-	40	0	0	67	29	43.28358209	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.90346282	0.90346282	1	0	0	1	0	0	0	0	3	1.22E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1215837824	1	22999695	G	A	-	-	-	-	-	-	39	0	0	11	5	45.45454545	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.948777569	0.948777569	1	0	0.00375	0.99625	0	0	0	0	3	1.41E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215837828	1	23042902	G	A	EPHB2	CCDS230.1	r.?	-	-	intronic	32	0	0	16	6	37.5	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.782741495	0.782741495	1	0	0.02625	0.97375	0	0	0	0	3	1.20E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215837842	1	23180902	G	A	EPHB2	CCDS230.1	r.?	-	-	intronic	32	0	0	42	17	40.47619048	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.844863836	0.844863836	1	0	0.00375	0.99625	0	0	0	0	3	1.73E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215837847	1	23280771	G	A	ENSG00000215906	ENST00000401081	r.?	-	-	intronic	36	0	0	47	21	44.68085106	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.932628164	0.932628164	1	0	0	1	0	0	0	0	3	5.29E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215838211	1	26742089	T	A	LIN28	CCDS280.1	r.?	-	-	intronic	38	0	0	70	13	18.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.731932773	0.731932773	1	0	0.025	0.975	0	0	0	0	3	4.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215838254	1	27205534	G	A	GPN2	CCDS289.1	r.?	-	-	downstream	37	0	0	43	10	23.25581395	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.916552668	0.916552668	1	0	0.00875	0.99125	0	0	0	0	3	1.61E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215838523	1	30412604	T	A	-	-	-	-	-	-	36	0	0	39	5	12.82051282	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.377073906	0.377073906	1	0.0775	0.5175	0.405	0	0	0	0	2	1.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215838737	1	32037248	G	A	TINAGL1	CCDS343.1	r.?	-	-	upstream	23	0	0	39	9	23.07692308	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.678733032	0.678733032	1	0	0.04	0.96	0	0	0	0	3	3.62E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215838780	1	32608017	T	A	KPNA6	CCDS352.1	r.?	-	-	intronic	25	0	0	43	9	20.93023256	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.615595075	0.615595075	1	0.005	0.1	0.895	0	0	0	0	3	9.45E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215839233	1	36149425	G	A	-	-	-	-	-	-	24	0	0	57	7	12.28070175	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.36119711	0.36119711	1	0.15375	0.72875	0.1175	0	0	0	0	2	1.66E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215839578	1	39113889	T	A	-	-	-	-	-	-	27	0	0	61	15	24.59016393	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.723240116	0.723240116	1	0	0.0275	0.9725	0	0	0	0	3	1.73E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215839714	1	40095396	G	A	HEYL	CCDS439.1	r.?	-	-	intronic	39	0	0	79	17	21.51898734	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.632911392	0.632911392	1	0.00125	0.115	0.88375	0	0	0	0	3	4.55E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215840031	1	42727484	G	A	FOXJ3	CCDS30689.1	r.?	-	-	intronic	30	0	0	81	15	18.51851852	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.544662309	0.544662309	1	0.00875	0.46625	0.525	0	0	0	0	3	1.82E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215840152	1	43617870	G	A	FAM183A	CCDS44126.1	r.?	-	-	intronic	35	0	0	49	10	20.40816327	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.008403361	1.008403361	1	0	0.00125	0.99875	0	0	0	0	3	6.72E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215840338	1	45256163	G	A	BEST4	CCDS514.1	r.?	-	-	upstream	28	0	0	80	16	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.0025	0.9975	0	0	0	0	3	3.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215840764	1	49033209	C	A	AGBL4	CCDS44137.1	r.?	-	-	intronic	58	0	0	72	13	18.05555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.892156863	0.892156863	1	0	0.005	0.995	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215840769	1	49111501	T	A	AGBL4	CCDS44137.1	r.?	-	-	intronic	30	0	0	49	8	16.32653061	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.806722689	0.806722689	1	0	0.01875	0.98125	0	0	0	0	3	1.47E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215840823	1	49679103	G	A	AGBL4	CCDS44137.1	r.?	-	-	intronic	26	0	0	66	18	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	2.08E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215840859	1	50019064	C	A	AGBL4	CCDS44137.1	r.?	-	-	intronic	44	0	0	85	15	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.00625	0.99375	0	0	0	0	3	3.95E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215840983	1	51241142	G	A	FAF1	CCDS554.1	r.?	-	-	intronic	35	0	0	79	20	25.3164557	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.250930752	1.250930752	1	0	0	1	0	0	0	0	3	1.91E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215841294	1	53522220	T	A	SCP2	CCDS572.1	r.?	-	-	downstream	39	0	0	70	23	32.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.623529412	0.811764706	2	0	0.0025	0.9975	0	0	0	0	3	1.70E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215841447	1	55190147	C	A	TTC4	CCDS596.1	r.?	-	-	intronic	35	0	0	55	11	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.0025	0.9975	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215841755	1	57872221	C	A	DAB1	CCDS607.1	r.?	-	-	intronic	36	0	0	67	15	22.3880597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.106233538	1.106233538	1	0	0.00125	0.99875	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215841768	1	58019287	G	A	DAB1	CCDS607.1	r.?	-	-	intronic	25	0	0	71	16	22.53521127	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.113504557	1.113504557	1	0	0	1	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215841790	1	58139522	T	A	DAB1	CCDS607.1	r.?	-	-	intronic	38	0	0	78	20	25.64102564	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.266968326	1.266968326	1	0	0	1	0	0	0	0	3	1.43E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215842173	1	61067941	G	A	-	-	-	-	-	-	38	0	0	66	18	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	2.08E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215842287	1	61989697	G	A	-	-	-	-	-	-	32	0	0	73	19	26.02739726	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.286059629	1.286059629	1	0	0	1	0	0	0	0	3	2.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215842292	1	62013896	T	A	-	-	-	-	-	-	30	0	0	86	6	6.976744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.344733242	0.344733242	1	0.1375	0.65	0.2125	0	0	0	0	2	5.22E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215842643	1	64212310	C	A	-	-	-	-	-	-	49	0	0	38	4	10.52631579	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.520123839	0.520123839	1	0.0075	0.1	0.8925	0	0	0	0	3	4.03E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215842669	1	64404140	T	A	ROR1	CCDS626.1	r.?	-	-	intronic	31	0	0	71	10	14.08450704	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.695940348	0.695940348	1	0	0.0325	0.9675	0	0	0	0	3	3.42E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215842709	1	64734868	T	A	UBE2U	ENST00000371077	r.?	-	-	downstream	34	0	0	51	10	19.60784314	147	0	0	82	16	19.51219512							4	2	2	1	NA	NA	NA	unphased	0.968858131	0.968858131	1	0	0.0025	0.9975	0	0	0	0	3	1.04E-13	1	4.67E-21	1	YES	somatic	1_1
1353824	PD9772b	1215843451	1	71128261	C	A	-	-	-	-	-	-	42	0	0	59	5	8.474576271	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.333998006	0.333998006	1	0.15375	0.59625	0.25	0	0	0	0	2	1.25E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215843514	1	71777300	T	A	-	-	-	-	-	-	35	0	0	65	18	27.69230769	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.091402715	1.091402715	1	0	0.00125	0.99875	0	0	0	0	3	1.52E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215843524	1	71867241	T	A	NEGR1	CCDS661.1	r.?	-	-	downstream	33	0	0	72	16	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.00375	0.99625	0	0	0	0	3	4.82E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215843831	1	75034213	C	A	C1orf173	CCDS30755.1	r.6741g>u	c.?	p.?	3'UTR variant	39	0	0	68	13	19.11764706	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.753460208	0.753460208	1	0	0.0175	0.9825	0	0	0	0	3	2.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215843934	1	76134583	G	A	-	-	-	-	-	-	29	0	0	30	6	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0.00125	0.02375	0.975	0	0	0	0	3	8.37E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215844428	1	81097734	G	A	-	-	-	-	-	-	38	0	0	51	12	23.52941176	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.0025	0.9975	0	0	0	0	3	3.24E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215844595	1	82788147	G	A	-	-	-	-	-	-	40	0	0	48	14	29.16666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.149509804	1.149509804	1	0	0.00125	0.99875	0	0	0	0	3	2.51E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215844696	1	83773539	C	A	-	-	-	-	-	-	14	0	0	59	18	30.50847458	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.202392822	1.202392822	1	0	0.0025	0.9975	0	0	0	0	3	2.03E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215845267	1	89104506	G	A	-	-	-	-	-	-	34	0	0	62	15	24.19354839	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.953510436	0.953510436	1	0	0.005	0.995	0	0	0	0	3	2.28E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215845294	1	89365797	G	A	-	-	-	-	-	-	36	0	0	63	11	17.46031746	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.688141923	0.688141923	1	0	0.0475	0.9525	0	0	0	0	3	2.37E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215845354	1	89958528	G	A	-	-	-	-	-	-	39	0	0	58	16	27.5862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.087221095	1.087221095	1	0	0	1	0	0	0	0	3	1.00E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215845564	1	92028528	G	A	-	-	-	-	-	-	32	0	0	69	23	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	1.15E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215845735	1	93826820	T	A	DR1	CCDS744.1	r.1913u>a	c.?	p.?	3'UTR variant	40	0	0	57	17	29.8245614	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.175438596	1.175438596	1	0	0	1	0	0	0	0	3	8.82E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215846865	1	105596562	C	A	-	-	-	-	-	-	40	0	0	78	15	19.23076923	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.757918552	0.757918552	1	0	0.0275	0.9725	0	0	0	0	3	9.92E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215847463	1	112870747	T	A	-	-	-	-	-	-	34	0	0	55	12	21.81818182	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.859893048	0.859893048	1	0	0.00875	0.99125	0	0	0	0	3	8.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215847638	1	114978749	G	A	TRIM33	CCDS872.1	r.?	-	-	intronic	20	0	0	53	16	30.18867925	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.189789123	1.189789123	1	0	0	1	0	0	0	0	3	1.90E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215847932	1	117251249	C	A	C1orf137	ENST00000369482	r.?	-	-	downstream	32	0	0	21	4	19.04761905	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.75070028	0.75070028	1	0	0.03	0.97	0	0	0	0	3	3.49E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215848057	1	118655590	C	A	SPAG17	CCDS899.1	r.?	-	-	intronic	44	0	0	54	8	14.81481481	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.583877996	0.583877996	1	0.00375	0.1025	0.89375	0	0	0	0	3	3.31E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215848104	1	119226440	G	A	-	-	-	-	-	-	37	0	0	73	21	28.76712329	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.133763094	1.133763094	1	0	0	1	0	0	0	0	3	4.03E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215856775	1	146830312	C	A	-	-	-	-	-	-	34	0	0	39	10	25.64102564	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.266968326	1.266968326	1	0	0.00125	0.99875	0	0	0	0	3	5.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215856881	1	147733730	C	A	-	-	-	-	-	-	37	0	0	65	15	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0.00125	0.99875	0	0	0	0	3	5.00E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215858304	1	149274761	T	A	-	-	-	-	-	-	35	0	0	76	6	7.894736842	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.390092879	0.390092879	1	0.08	0.50875	0.41125	0	0	0	0	2	2.53E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215858705	1	151410020	G	A	POGZ	CCDS997.1	r.?	-	-	intronic	25	0	0	51	16	31.37254902	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.55017301	0.775086505	2	0	0.0075	0.9925	0	0	0	0	3	9.28E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215858913	1	152986409	T	A	-	-	-	-	-	-	39	0	0	85	15	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0	1	0	0	0	0	3	3.95E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215858921	1	153075546	G	A	SPRR2E	CCDS30866.1	r.?	-	-	intronic	38	0	0	14	4	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0.0125	0.9875	0	0	0	0	3	6.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215859121	1	154360067	G	A	-	-	-	-	-	-	29	0	0	43	16	37.20930233	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.838577291	0.919288646	2	0	0.00125	0.99875	0	0	0	0	3	3.56E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215859218	1	155228222	G	A	FAM189B	CCDS1103.1	r.?	-	-	upstream	29	0	0	46	11	23.91304348	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.181585678	1.181585678	1	0	0.00375	0.99625	0	0	0	0	3	5.55E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215859611	1	158595452	G	A	SPTA1	CCDS41423.1	r.?	-	-	intronic	29	0	0	94	28	29.78723404	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.4718398	0.7359199	2	0	0.0225	0.9775	0	0	0	0	3	1.77E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1215859916	1	160833328	G	A	CD244	CCDS1210.1	r.?	-	-	upstream	34	0	0	40	8	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00375	0.99625	0	0	0	0	3	2.61E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215859921	1	160856558	T	A	ITLN1	CCDS1211.1	r.?	-	-	upstream	33	0	0	44	12	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	4.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215860356	1	163905597	G	A	-	-	-	-	-	-	41	0	0	84	14	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01	0.99	0	0	0	0	3	1.40E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215860431	1	164455841	G	A	-	-	-	-	-	-	34	0	0	89	18	20.2247191	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.999339061	0.999339061	1	0	0	1	0	0	0	0	3	8.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215860542	1	165143519	T	A	-	-	-	-	-	-	35	0	0	54	7	12.96296296	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.640522876	0.640522876	1	0.00125	0.055	0.94375	0	0	0	0	3	1.13E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215860777	1	166780789	G	A	-	-	-	-	-	-	30	0	0	77	16	20.77922078	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.026737968	1.026737968	1	0	0	1	0	0	0	0	3	1.56E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215860847	1	167477453	G	A	CD247	CCDS1260.1	r.?	-	-	intronic	29	0	0	75	20	26.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0	0	1	0	0	0	0	3	5.89E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215860914	1	168131526	G	A	-	-	-	-	-	-	23	0	0	49	14	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0	1	0	0	0	0	3	3.50E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215861605	1	174036484	C	A	-	-	-	-	-	-	35	0	0	79	14	17.72151899	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.875651526	0.875651526	1	0	0.00625	0.99375	0	0	0	0	3	5.60E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215861820	1	175523229	C	A	TNR	CCDS1318.1	r.?	-	-	intronic	30	0	0	57	8	14.03508772	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.693498452	0.693498452	1	0.0025	0.0475	0.95	0	0	0	0	3	5.19E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215861826	1	175618345	G	A	TNR	CCDS1318.1	r.?	-	-	intronic	28	0	0	21	6	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0.0075	0.9925	0	0	0	0	3	7.95E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215861855	1	175822226	G	A	-	-	-	-	-	-	31	0	0	64	20	31.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.544117647	0.772058824	2	0	0.0025	0.9975	0	0	0	0	3	1.52E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215862223	1	178699867	G	A	RALGPS2	CCDS1325.1	r.?	-	-	intronic	34	0	0	41	9	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0.00375	0.99625	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215862398	1	179706158	C	A	-	-	-	-	-	-	36	0	0	74	17	22.97297297	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.135135135	1.135135135	1	0	0	1	0	0	0	0	3	1.34E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215862469	1	180134219	C	A	QSOX1	CCDS1337.1	r.?	-	-	intronic	21	0	0	51	9	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.01	0.99	0	0	0	0	3	4.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215862508	1	180376613	C	A	ACBD6	CCDS1339.1	r.?	-	-	intronic	36	0	0	75	17	22.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.12	1.12	1	0	0.00125	0.99875	0	0	0	0	3	1.72E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215862706	1	181959118	T	A	-	-	-	-	-	-	24	0	0	81	10	12.34567901	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.610021786	0.610021786	1	0.0025	0.08	0.9175	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215862855	1	182947284	C	A	-	-	-	-	-	-	43	0	0	92	17	18.47826087	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.913043478	0.913043478	1	0	0.00375	0.99625	0	0	0	0	3	7.54E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215862920	1	183428589	G	A	-	-	-	-	-	-	41	0	0	61	11	18.03278689	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.891031823	0.891031823	1	0	0.00625	0.99375	0	0	0	0	3	1.62E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215862929	1	183471517	G	A	SMG7	CCDS1355.1	r.?	-	-	intronic	36	0	0	61	12	19.67213115	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.972034716	0.972034716	1	0	0.005	0.995	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215863524	1	188197150	G	A	-	-	-	-	-	-	38	0	0	77	14	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.0025	0.9975	0	0	0	0	3	3.82E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215863607	1	188728272	G	A	-	-	-	-	-	-	28	0	0	83	26	31.3253012	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.547838412	0.773919206	2	0	0.00375	0.99625	0	0	0	0	3	2.73E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1215863687	1	189571287	G	A	-	-	-	-	-	-	37	0	0	85	19	22.35294118	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.10449827	1.10449827	1	0	0	1	0	0	0	0	3	5.93E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215863732	1	189901768	G	A	-	-	-	-	-	-	40	0	0	76	17	22.36842105	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.105263158	1.105263158	1	0	0	1	0	0	0	0	3	2.21E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215863968	1	191770192	C	A	-	-	-	-	-	-	34	0	0	68	15	22.05882353	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.089965398	1.089965398	1	0	0	1	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215864103	1	192811577	T	A	-	-	-	-	-	-	34	0	0	92	19	20.65217391	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.020460358	1.020460358	1	0	0.0025	0.9975	0	0	0	0	3	3.08E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215864225	1	193798393	T	A	-	-	-	-	-	-	39	0	0	93	26	27.95698925	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.381404175	0.690702087	2	0	0.045	0.955	0	0	0	0	3	8.48E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215864462	1	195095813	C	A	-	-	-	-	-	-	40	0	0	86	17	19.76744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976744186	0.976744186	1	0	0.0025	0.9975	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215864514	1	195564503	G	A	-	-	-	-	-	-	39	0	0	81	24	29.62962963	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.464052288	0.732026144	2	0	0.01125	0.98875	0	0	0	0	3	1.04E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215864573	1	196091536	G	A	-	-	-	-	-	-	47	0	0	72	16	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	4.82E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215864904	1	198337302	T	A	-	-	-	-	-	-	29	0	0	70	15	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.00375	0.99625	0	0	0	0	3	1.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215865275	1	201029914	G	A	CACNA1S	CCDS1407.1	r.3513c>u	c.3286C>T	p.R1096C	missense	28	0	0	49	10	20.40816327	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.008403361	1.008403361	1	0	0.00875	0.99125	0	0	0	0	3	6.72E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215865343	1	201456111	G	A	CSRP1	CCDS44293.1	r.635c>u	c.?	p.?	3'UTR variant	40	0	0	48	8	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.00875	0.99125	0	0	0	0	3	1.23E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215865351	1	201551867	G	A	-	-	-	-	-	-	33	0	0	26	6	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0.01	0.99	0	0	0	0	3	3.30E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215865357	1	201591172	C	A	NAV1	ENST00000367302	r.?	-	-	upstream	29	0	0	46	14	30.43478261	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.503836317	1.503836317	1	0	0.00125	0.99875	0	0	0	0	3	1.26E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215865509	1	202810098	C	A	-	-	-	-	-	-	41	0	0	77	11	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.035	0.96375	0	0	0	0	3	2.41E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215865581	1	203382945	G	A	-	-	-	-	-	-	28	0	0	92	12	13.04347826	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.644501279	0.644501279	1	0	0.06	0.94	0	0	0	0	3	6.12E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215865623	1	203627866	G	A	ATP2B4	CCDS1440.1	r.?	-	-	intronic	50	0	0	39	5	12.82051282	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.633484163	0.633484163	1	0.0025	0.05375	0.94375	0	0	0	0	3	1.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215865711	1	204185484	G	A	PLEKHA6	CCDS1444.1	r.?	-	-	downstream	31	0	0	94	12	12.76595745	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.630788486	0.630788486	1	0.00125	0.07625	0.9225	0	0	0	0	3	7.98E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215865788	1	204760589	G	A	-	-	-	-	-	-	32	0	0	77	14	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.00375	0.99625	0	0	0	0	3	3.82E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215865810	1	205050244	G	A	CNTN2	CCDS1449.1	r.?	-	-	downstream	31	0	0	64	11	17.1875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.849264706	0.849264706	1	0	0.00875	0.99125	0	0	0	0	3	2.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215865867	1	205493942	G	A	CDK18	CCDS1454.1	r.?	-	-	intronic	35	0	0	63	17	26.98412698	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.333333333	1.333333333	1	0	0	1	0	0	0	0	3	6.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215866052	1	207072809	G	A	IL24	CCDS1471.1	r.463g>a	c.189G>A	p.G63G	silent	26	0	0	27	6	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.0075	0.9925	0	0	0	0	3	4.23E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215866266	1	208947108	T	A	-	-	-	-	-	-	40	0	0	57	15	26.31578947	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.300309598	1.300309598	1	0	0	1	0	0	0	0	3	5.53E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215866348	1	209547560	T	A	-	-	-	-	-	-	36	0	0	73	11	15.06849315	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.744560838	0.744560838	1	0	0.02	0.98	0	0	0	0	3	1.31E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215866397	1	210019414	G	A	C1orf107	CCDS1493.1	r.?	-	-	intronic	31	0	0	48	19	39.58333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.955882353	0.977941176	2	0	0	1	0	0	0	0	3	1.92E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215866409	1	210120728	C	A	SYT14	CCDS31014.1	r.?	-	-	intronic	38	0	0	94	17	18.08510638	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.893617021	0.893617021	1	0	0.00125	0.99875	0	0	0	0	3	1.12E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215866543	1	211053467	G	A	KCNH1	CCDS31015.1	r.?	-	-	intronic	31	0	0	91	19	20.87912088	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.031674208	1.031674208	1	0	0.00125	0.99875	0	0	0	0	3	2.46E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215866545	1	211065407	G	A	KCNH1	CCDS31015.1	r.?	-	-	intronic	26	0	0	72	11	15.27777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.754901961	0.754901961	1	0	0.0225	0.9775	0	0	0	0	3	1.12E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215866570	1	211265690	T	A	KCNH1	CCDS31015.1	r.?	-	-	intronic	42	0	0	65	11	16.92307692	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.836199095	0.836199095	1	0	0.00375	0.99625	0	0	0	0	3	3.41E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215866838	1	212720239	G	A	-	-	-	-	-	-	33	0	0	71	12	16.90140845	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.004142502	1.004142502	1	0	0.00375	0.99625	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215867123	1	214157439	T	A	PROX1	CCDS31021.1	r.?	-	-	upstream	39	0	0	51	17	33.33333333	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.980392157	0.990196078	2	0	0	1	0	0	0	0	3	9.59E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215867363	1	215717851	T	A	-	-	-	-	-	-	40	0	0	97	15	15.46391753	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.918738629	0.918738629	1	0	0.00125	0.99875	0	0	0	0	3	3.21E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215867404	1	216071121	G	A	USH2A	CCDS31025.1	r.?	-	-	intronic	32	0	0	93	39	41.93548387	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.491461101	0.830487034	3	0	0	1	0	0	0	0	3	3.43E-64	1	1	1	NA	NA	NA
1353824	PD9772b	1215867421	1	216220456	G	A	USH2A	CCDS31025.1	r.?	-	-	intronic	45	0	0	108	30	27.77777778	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.650326797	0.825163399	2	0	0	1	0	0	0	0	3	2.81E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1215867551	1	216992651	G	A	ESRRG	CCDS1517.1	r.?	-	-	intronic	43	0	0	121	24	19.83471074	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.178415168	1.178415168	1	0	0.00125	0.99875	0	0	0	0	3	5.07E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215867667	1	217576204	G	A	-	-	-	-	-	-	40	0	0	91	17	18.68131868	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.10989011	1.10989011	1	0	0.00125	0.99875	0	0	0	0	3	6.18E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215867787	1	218327621	G	A	-	-	-	-	-	-	34	0	0	106	34	32.0754717	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.905660377	0.952830189	2	0	0	1	0	0	0	0	3	2.60E-51	1	1	1	NA	NA	NA
1353824	PD9772b	1215868002	1	219627266	G	A	-	-	-	-	-	-	28	0	0	102	24	23.52941176	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.397923875	0.698961938	2	0	0.04125	0.95875	0	0	0	0	3	5.60E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215868316	1	221473377	T	A	-	-	-	-	-	-	36	0	0	115	17	14.7826087	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.87826087	0.87826087	1	0	0.00125	0.99875	0	0	0	0	3	4.19E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215868544	1	222987093	T	A	-	-	-	-	-	-	29	0	0	102	16	15.68627451	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.93194925	0.93194925	1	0	0.0025	0.9975	0	0	0	0	3	1.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215868657	1	223613292	G	A	-	-	-	-	-	-	27	0	0	92	11	11.95652174	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.710358056	0.710358056	1	0	0.0225	0.9775	0	0	0	0	3	1.81E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215868712	1	224048834	G	A	-	-	-	-	-	-	30	0	0	91	15	16.48351648	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.979314803	0.979314803	1	0	0.00125	0.99875	0	0	0	0	3	1.17E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215868907	1	224753259	C	A	-	-	-	-	-	-	41	0	0	69	15	21.73913043	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.291560102	1.291560102	1	0	0	1	0	0	0	0	3	1.34E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215869421	1	227891517	T	A	-	-	-	-	-	-	31	0	0	111	21	18.91891892	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.313195548	1.313195548	1	0	0	1	0	0	0	0	3	7.20E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215869458	1	228285475	T	A	ARF1	CCDS1565.1	r.?	-	-	intronic	34	0	0	3	2	66.66666667	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	4.62745098	1.156862745	4	0.00125	0.01375	0.985	0	0	0	0	3	7.48E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215869571	1	229084104	T	A	-	-	-	-	-	-	25	0	0	51	10	19.60784314	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.361014994	1.361014994	1	0	0	1	0	0	0	0	3	1.04E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215869755	1	229954972	C	A	-	-	-	-	-	-	32	0	0	115	49	42.60869565	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.957544757	0.985848252	3	0	0	1	0	0	0	0	3	1.13E-80	1	1	1	NA	NA	NA
1353824	PD9772b	1215869789	1	230115227	C	A	-	-	-	-	-	-	33	0	0	107	24	22.42990654	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.556899395	0.778449698	2	0	0.00375	0.99625	0	0	0	0	3	2.00E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215869806	1	230182323	G	A	-	-	-	-	-	-	37	0	0	90	40	44.44444444	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	3.08496732	1.02832244	3	0	0	1	0	0	0	0	3	4.26E-67	1	1	1	NA	NA	NA
1353824	PD9772b	1215870016	1	231283852	G	A	-	-	-	-	-	-	36	0	0	62	18	29.03225806	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.015180266	1.007590133	2	0	0.00125	0.99875	0	0	0	0	3	5.72E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215870436	1	234011799	G	A	-	-	-	-	-	-	35	0	0	88	23	26.13636364	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	1.552807487	0.776403743	2	0	0.0025	0.9975	0	0	0	0	3	7.59E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215870666	1	235088114	C	A	-	-	-	-	-	-	36	0	0	93	49	52.68817204	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	3.13029728	1.043432427	3	0	0	1	0	0	0	0	3	1.02E-86	1	1	1	NA	NA	NA
1353824	PD9772b	1215871098	1	237147933	T	A	-	-	-	-	-	-	41	0	0	101	50	49.5049505	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	2.941176471	0.980392157	3	0	0	1	0	0	0	0	3	1.38E-86	1	1	1	NA	NA	NA
1353824	PD9772b	1215871149	1	237362061	T	A	RYR2	ENST00000366574	r.?	-	-	intronic	31	0	0	74	8	10.81081081	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	0.642289348	0.642289348	1	0.00125	0.03375	0.965	0	0	0	0	3	4.39E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215871261	1	237903972	G	A	RYR2	ENST00000366574	r.?	-	-	intronic	46	0	0	105	49	46.66666667	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	2.77254902	0.924183007	3	0	0	1	0	0	0	0	3	3.37E-83	1	1	1	NA	NA	NA
1353824	PD9772b	1215871376	1	238471613	G	A	-	-	-	-	-	-	33	0	0	100	45	45	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	2.673529412	0.891176471	3	0	0	1	0	0	0	0	3	1.33E-75	1	1	1	NA	NA	NA
1353824	PD9772b	1215871777	1	240107140	T	A	-	-	-	-	-	-	33	0	0	93	7	7.52688172	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	0.748260595	0.748260595	1	0	0.03	0.97	0	0	0	0	3	5.08E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215871851	1	240303767	C	A	FMN2	CCDS31069.2	r.?	-	-	intronic	48	0	0	151	20	13.24503311	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	1.316712115	1.316712115	1	0	0	1	0	0	0	0	3	2.14E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215872046	1	240754480	G	A	GREM2	CCDS31070.1	r.?	-	-	intronic	29	0	0	104	22	21.15384615	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	2.102941176	1.051470588	2	0	0	1	0	0	0	0	3	3.10E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215872105	1	240942610	C	A	RGS7	CCDS31071.1	r.?	-	-	intronic	29	0	0	58	21	36.20689655	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	3.599391481	0.89984787	4	0	0.00125	0.99875	0	0	0	0	3	1.34E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215872135	1	241021330	G	A	RGS7	CCDS31071.1	r.?	-	-	intronic	36	0	0	127	15	11.81102362	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	1.174154701	1.174154701	1	0	0.00125	0.99875	0	0	0	0	3	2.10E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215872465	1	241988429	G	A	-	-	-	-	-	-	15	0	0	119	9	7.56302521	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	0.751853683	0.751853683	1	0	0.03	0.97	0	0	0	0	3	1.15E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215872803	1	242611644	C	A	PLD5	CCDS1621.1	r.?	-	-	intronic	40	0	0	134	15	11.19402985	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	1.112818262	1.112818262	1	0	0.00125	0.99875	0	0	0	0	3	4.77E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215873104	1	244023664	G	A	-	-	-	-	-	-	21	0	0	110	17	15.45454545	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.072727273	1.072727273	1	0	0	1	0	0	0	0	3	1.90E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215873456	1	245639203	C	A	KIF26B	CCDS44342.1	r.?	-	-	intronic	41	0	0	103	32	31.06796117	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.15648201	1.078241005	2	0	0	1	0	0	0	0	3	7.30E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1215874690	10	1804261	T	A	-	-	-	-	-	-	39	0	0	83	15	18.07228916	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.8929837	0.8929837	1	0	0.00125	0.99875	0	0	0	0	3	2.70E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215874691	10	1813505	G	A	-	-	-	-	-	-	38	0	0	91	17	18.68131868	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.923076923	0.923076923	1	0	0.0025	0.9975	0	0	0	0	3	6.18E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215874782	10	2355813	T	A	-	-	-	-	-	-	41	0	0	78	11	14.1025641	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.696832579	0.696832579	1	0	0.04125	0.95875	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215874921	10	3248125	G	A	-	-	-	-	-	-	32	0	0	19	4	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0.00125	0.015	0.98375	0	0	0	0	3	2.28E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215874992	10	3765880	T	A	-	-	-	-	-	-	29	0	0	79	16	20.25316456	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.000744602	1.000744602	1	0	0	1	0	0	0	0	3	2.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215875045	10	4133811	C	A	-	-	-	-	-	-	24	0	0	94	23	24.46808511	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.209011264	1.209011264	1	0	0	1	0	0	0	0	3	4.19E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215875065	10	4257372	T	A	-	-	-	-	-	-	31	0	0	67	12	17.91044776	205	1	0.487804878	126	22	17.46031746							4	2	2	1	NA	NA	NA	unphased	0.884986831	0.884986831	1	0	0.005	0.995	0	0	0	0	3	1.14E-15	1	2.97E-27	0.642124842	YES	somatic	1_1
1353824	PD9772b	1215875129	10	4805357	G	A	-	-	-	-	-	-	24	0	0	80	16	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.0025	0.9975	0	0	0	0	3	3.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215875402	10	6522128	C	A	PRKCQ	CCDS7079.1	r.?	-	-	intronic	27	0	0	66	23	34.84848485	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.721925134	0.860962567	2	0	0	1	0	0	0	0	3	3.38E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215875681	10	8145793	G	A	-	-	-	-	-	-	33	0	0	41	5	12.19512195	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.602582496	0.602582496	1	0.0025	0.0625	0.935	0	0	0	0	3	2.02E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215875704	10	8336162	G	A	-	-	-	-	-	-	36	0	0	86	18	20.93023256	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.034199726	1.034199726	1	0	0.0025	0.9975	0	0	0	0	3	4.22E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215876269	10	12194924	G	A	SEC61A2	CCDS44359.1	r.?	-	-	intronic	22	0	0	18	5	27.77777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.37254902	1.37254902	1	0	0.0075	0.9925	0	0	0	0	3	2.54E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215876741	10	15191645	T	A	NMT2	CCDS7109.1	r.?	-	-	intronic	37	0	0	72	9	12.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.617647059	0.617647059	1	0	0.0925	0.9075	0	0	0	0	3	1.25E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215876882	10	16150060	C	A	-	-	-	-	-	-	40	0	0	78	15	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0.00125	0.99875	0	0	0	0	3	9.92E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215877010	10	16914639	G	A	CUBN	CCDS7113.1	r.?	-	-	intronic	33	0	0	89	14	15.73033708	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.777263714	0.777263714	1	0	0.01	0.99	0	0	0	0	3	3.28E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215877012	10	16933424	C	A	CUBN	CCDS7113.1	r.?	-	-	intronic	30	0	0	60	11	18.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.905882353	0.905882353	1	0	0.0025	0.9975	0	0	0	0	3	1.34E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215877132	10	17616416	T	A	-	-	-	-	-	-	41	0	0	76	8	10.52631579	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.520123839	0.520123839	1	0.01375	0.2325	0.75375	0	0	0	0	3	5.44E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215877177	10	18384455	C	A	-	-	-	-	-	-	30	0	0	50	12	24	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.185882353	1.185882353	1	0	0.0025	0.9975	0	0	0	0	3	2.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215877289	10	19000613	G	A	-	-	-	-	-	-	42	0	0	44	6	13.63636364	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.673796791	0.673796791	1	0	0.0525	0.9475	0	0	0	0	3	9.37E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215877343	10	19288067	C	A	-	-	-	-	-	-	32	0	0	58	9	15.51724138	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.76673428	0.76673428	1	0	0.0125	0.9875	0	0	0	0	3	1.67E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215877790	10	22355958	C	A	-	-	-	-	-	-	24	0	0	58	8	13.79310345	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.681541582	0.681541582	1	0.00125	0.05375	0.945	0	0	0	0	3	5.99E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215877949	10	23935117	G	A	-	-	-	-	-	-	33	0	0	62	18	29.03225806	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.434535104	1.434535104	1	0	0	1	0	0	0	0	3	5.72E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215878118	10	25049183	T	A	-	-	-	-	-	-	27	0	0	87	29	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	0.823529412	2	0	0.0025	0.9975	0	0	0	0	3	1.43E-44	1	1	1	NA	NA	NA
1353824	PD9772b	1215878458	10	27211354	T	A	-	-	-	-	-	-	31	0	0	38	14	36.84210526	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.820433437	0.910216718	2	0	0.00125	0.99875	0	0	0	0	3	5.28E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215878852	10	29657546	G	A	-	-	-	-	-	-	51	0	0	57	13	22.80701754	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.126934985	1.126934985	1	0	0	1	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215879207	10	31995146	G	A	-	-	-	-	-	-	30	0	0	24	5	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.0125	0.9875	0	0	0	0	3	1.23E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215879616	10	35120777	G	A	-	-	-	-	-	-	29	0	0	34	7	20.58823529	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.017301038	1.017301038	1	0	0.01125	0.98875	0	0	0	0	3	3.73E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215879669	10	35490841	G	A	CREM	CCDS7181.1	r.?	-	-	intronic	36	0	0	75	11	14.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.724705882	0.724705882	1	0	0.02	0.98	0	0	0	0	3	1.78E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215879868	10	36972994	G	A	-	-	-	-	-	-	27	0	0	64	16	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	5.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215880163	10	38605070	G	A	-	-	-	-	-	-	34	0	0	107	15	14.01869159	0	0	NA	2	0	0							4.426998142	2	2	0.573001858	3	2	0.426998142	unphased	0.752547843	0.752547843	1	0.00125	0.015	0.98375	0	0	0	0	3	1.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215884425	10	44201508	G	A	-	-	-	-	-	-	56	0	0	19	5	26.31578947	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.037151703	1.037151703	1	0	0.015	0.985	0	0	0	0	3	3.43E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215884572	10	46162075	T	A	ANUBL1	CCDS7214.1	r.?	-	-	intronic	22	0	0	74	23	31.08108108	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.224960254	1.224960254	1	0	0	1	0	0	0	0	3	7.70E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215884870	10	50244559	C	A	C10orf72	CCDS31198.1	r.?	-	-	intronic	33	0	0	50	10	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.01625	0.98375	0	0	0	0	3	8.36E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215885178	10	54197844	T	A	-	-	-	-	-	-	30	0	0	41	17	41.46341463	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.634146341	0.817073171	2	0	0.00375	0.99625	0	0	0	0	3	1.03E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215885218	10	54652917	T	A	-	-	-	-	-	-	42	0	0	64	14	21.875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.862132353	0.862132353	1	0	0.0075	0.9925	0	0	0	0	3	2.31E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215885357	10	55767315	G	A	PCDH15	CCDS44404.1	r.?	-	-	intronic	46	0	0	53	15	28.30188679	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.115427303	1.115427303	1	0	0	1	0	0	0	0	3	1.60E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215885641	10	58008884	G	A	-	-	-	-	-	-	33	0	0	72	20	27.77777778	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.094771242	1.094771242	1	0	0	1	0	0	0	0	3	2.32E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215885668	10	58413841	C	A	-	-	-	-	-	-	54	0	0	46	16	34.7826087	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.37084399	1.37084399	1	0	0	1	0	0	0	0	3	1.31E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215885755	10	59317982	T	A	-	-	-	-	-	-	46	0	0	57	12	21.05263158	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.829721362	0.829721362	1	0	0.00875	0.99125	0	0	0	0	3	1.40E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215885860	10	60134904	G	A	-	-	-	-	-	-	23	0	0	60	17	28.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.116666667	1.116666667	1	0	0	1	0	0	0	0	3	2.41E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215885922	10	61050973	G	A	FAM13C	CCDS44406.1	r.?	-	-	intronic	30	0	0	36	8	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.01125	0.98875	0	0	0	0	3	1.04E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215886069	10	62066695	C	A	ANK3	CCDS7258.1	r.?	-	-	intronic	38	0	0	87	17	19.54022989	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.965517241	0.965517241	1	0	0.00125	0.99875	0	0	0	0	3	2.71E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215886107	10	62334773	C	A	ANK3	ENST00000373827	r.?	-	-	intronic	38	0	0	78	16	20.51282051	122	0	0	95	18	18.94736842							4	2	2	1	NA	NA	NA	unphased	1.013574661	1.013574661	1	0	0.00125	0.99875	0	0	0	0	3	1.96E-21	1	2.94E-23	1	YES	somatic	1_1
1353824	PD9772b	1215886163	10	62813779	T	A	-	-	-	-	-	-	29	0	0	83	21	25.30120482	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.250177179	1.250177179	1	0	0	1	0	0	0	0	3	8.70E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215886202	10	63209925	C	A	TMEM26	CCDS41530.1	r.?	-	-	intronic	34	0	0	97	14	14.43298969	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.713159491	0.713159491	1	0	0.03	0.97	0	0	0	0	3	1.16E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215886238	10	63465896	T	A	C10orf107	CCDS7262.1	r.?	-	-	intronic	34	0	0	88	24	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	1.03E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215886405	10	64839678	C	A	-	-	-	-	-	-	36	0	0	90	24	26.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0	0	1	0	0	0	0	3	1.91E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215886519	10	65754675	G	A	-	-	-	-	-	-	44	0	0	85	21	24.70588235	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.220761246	1.220761246	1	0	0	1	0	0	0	0	3	1.53E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215886681	10	66928961	C	A	-	-	-	-	-	-	45	0	0	83	19	22.89156627	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.131112686	1.131112686	1	0	0	1	0	0	0	0	3	3.60E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215886795	10	67835823	T	A	CTNNA3	CCDS7269.1	r.?	-	-	intronic	54	0	0	84	14	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.00375	0.99625	0	0	0	0	3	1.40E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215886938	10	68975901	C	A	CTNNA3	CCDS7269.1	r.?	-	-	intronic	42	0	0	74	17	22.97297297	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	1.135135135	1.135135135	1	0	0	1	0	0	0	0	3	1.34E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215886997	10	69384398	C	A	CTNNA3	CCDS7269.1	r.?	-	-	intronic	32	0	0	82	16	19.51219512	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.964131994	0.964131994	1	0	0.00125	0.99875	0	0	0	0	3	4.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215887169	10	70531551	T	A	CCAR1	CCDS7282.1	r.?	-	-	intronic	37	0	0	67	11	16.41791045	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.811237928	0.811237928	1	0	0.01125	0.98875	0	0	0	0	3	4.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215887261	10	71307528	T	A	-	-	-	-	-	-	33	0	0	66	16	24.24242424	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.197860963	1.197860963	1	0	0	1	0	0	0	0	3	1.03E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215887531	10	74018947	G	A	-	-	-	-	-	-	25	0	0	61	16	26.2295082	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.296046287	1.296046287	1	0	0	1	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215887591	10	74366934	T	A	CBARA1	ENST00000398761	r.?	-	-	intronic	34	0	0	40	4	10	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.494117647	0.494117647	1	0.015	0.10875	0.87625	0	0	0	0	3	4.95E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215887638	10	74566341	C	A	CCDC109A	CCDS7317.1	r.?	-	-	intronic	33	0	0	52	9	17.30769231	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.85520362	0.85520362	1	0	0.0075	0.9925	0	0	0	0	3	5.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215887683	10	74833274	C	A	P4HA1	CCDS41537.1	r.?	-	-	intronic	42	0	0	43	13	30.23255814	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.493844049	1.493844049	1	0	0	1	0	0	0	0	3	3.88E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215887749	10	75384577	T	A	USP54	CCDS7329.2	r.?	-	-	intronic	43	0	0	55	11	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00625	0.99375	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215887893	10	76369550	C	A	ADK	CCDS7344.1	r.?	-	-	intronic	37	0	0	57	13	22.80701754	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.126934985	1.126934985	1	0	0	1	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215887941	10	76760050	T	A	MYST4	CCDS7345.1	r.?	-	-	intronic	37	0	0	70	15	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	1.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215888092	10	78080944	T	A	C10orf11	CCDS7351.1	r.?	-	-	intronic	32	0	0	69	16	23.1884058	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.145780051	1.145780051	1	0	0	1	0	0	0	0	3	2.27E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215888108	10	78210357	G	A	C10orf11	CCDS7351.1	r.?	-	-	intronic	34	0	0	76	10	13.15789474	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.650154799	0.650154799	1	0.00125	0.0625	0.93625	0	0	0	0	3	6.90E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215888121	10	78278218	T	A	C10orf11	CCDS7351.1	r.?	-	-	intronic	28	0	0	90	12	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0.00125	0.04625	0.9525	0	0	0	0	3	4.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215888399	10	80591459	G	A	-	-	-	-	-	-	34	0	0	26	6	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0.00375	0.99625	0	0	0	0	3	3.30E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215888537	10	81700084	C	A	SFTPD	CCDS7362.1	r.?	-	-	intronic	38	0	0	12	4	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	1.647058824	1	0	0.0075	0.9925	0	0	0	0	3	3.00E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215888689	10	83021295	C	A	-	-	-	-	-	-	39	0	0	89	22	24.71910112	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.221414408	1.221414408	1	0	0	1	0	0	0	0	3	6.96E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215888853	10	84452628	G	A	NRG3	CCDS31233.1	r.?	-	-	intronic	32	0	0	62	13	20.96774194	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.036053131	1.036053131	1	0	0	1	0	0	0	0	3	8.08E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215888967	10	85267620	G	A	-	-	-	-	-	-	36	0	0	70	17	24.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.2	1.2	1	0	0	1	0	0	0	0	3	4.68E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215888994	10	85503890	G	A	-	-	-	-	-	-	36	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.0075	0.9925	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215889421	10	88832588	T	A	GLUD1	CCDS7382.1	r.?	-	-	intronic	37	0	0	79	21	26.58227848	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.31347729	1.31347729	1	0	0	1	0	0	0	0	3	2.69E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215889747	10	91752656	T	A	-	-	-	-	-	-	34	0	0	87	17	19.54022989	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.965517241	0.965517241	1	0	0.00125	0.99875	0	0	0	0	3	2.71E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215889827	10	92526118	G	A	HTR7	CCDS7408.1	r.?	-	-	intronic	37	0	0	75	13	17.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.856470588	0.856470588	1	0.00125	0.01125	0.9875	0	0	0	0	3	1.16E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215889829	10	92537111	G	A	HTR7	CCDS7408.1	r.?	-	-	intronic	31	0	0	38	10	26.31578947	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.300309598	1.300309598	1	0	0	1	0	0	0	0	3	4.06E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215890019	10	94101969	G	A	Mar-05	CCDS7420.1	r.?	-	-	intronic	26	0	0	56	17	30.35714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.5	0.75	2	0	0.015	0.985	0	0	0	0	3	6.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215890333	10	95972232	C	A	PLCE1	CCDS41552.1	r.?	-	-	intronic	56	0	0	50	9	18	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.889411765	0.889411765	1	0	0.0075	0.9925	0	0	0	0	3	4.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215890453	10	96952756	T	A	C10orf129	CCDS7440.2	r.?	-	-	upstream	32	0	0	92	14	15.2173913	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.751918159	0.751918159	1	0	0.025	0.975	0	0	0	0	3	5.34E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215890597	10	98071337	G	A	DNTT	CCDS44465.1	r.?	-	-	intronic	39	0	0	50	6	12	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.592941176	0.592941176	1	0	0.095	0.905	0	0	0	0	3	2.06E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215890615	10	98230327	G	A	TLL2	CCDS7449.1	r.?	-	-	intronic	27	0	0	52	11	21.15384615	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.045248869	1.045248869	1	0	0.00125	0.99875	0	0	0	0	3	2.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215890756	10	99495999	T	A	ZFYVE27	CCDS31262.1	r.?	-	-	upstream	30	0	0	66	10	15.15151515	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.748663102	0.748663102	1	0	0.01375	0.98625	0	0	0	0	3	1.60E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215890791	10	99782824	C	A	CRTAC1	CCDS31266.1	r.?	-	-	intronic	32	0	0	72	13	18.05555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.892156863	0.892156863	1	0	0.00375	0.99625	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215890812	10	99939978	G	A	C10orf28	CCDS31267.1	r.?	-	-	intronic	36	0	0	99	22	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	9.43E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215890848	10	100268189	C	A	HPSE2	CCDS7477.1	r.?	-	-	intronic	27	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.00625	0.99375	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215891136	10	102258358	G	A	SEC31B	CCDS7495.1	r.?	-	-	intronic	39	0	0	73	19	26.02739726	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.286059629	1.286059629	1	0	0	1	0	0	0	0	3	2.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215891338	10	103994554	C	A	PITX3	CCDS7532.1	r.?	-	-	intronic	16	0	0	39	8	20.51282051	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.013574661	1.013574661	1	0	0.005	0.995	0	0	0	0	3	2.09E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215891379	10	104295785	G	A	SUFU	CCDS7537.1	r.?	-	-	intronic	35	0	0	31	5	16.12903226	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.796963947	0.796963947	1	0	0.0225	0.9775	0	0	0	0	3	4.76E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215891617	10	106258841	G	A	-	-	-	-	-	-	45	0	0	85	14	16.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.81384083	0.81384083	1	0	0.00625	0.99375	0	0	0	0	3	1.66E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215891946	10	108682117	C	A	SORCS1	CCDS7559.1	r.?	-	-	intronic	30	0	0	71	17	23.94366197	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.183098592	1.183098592	1	0	0	1	0	0	0	0	3	6.12E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215892088	10	109793085	C	A	-	-	-	-	-	-	40	0	0	89	10	11.23595506	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.555188367	0.555188367	1	0.00375	0.1775	0.81875	0	0	0	0	3	3.47E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215892091	10	109826265	C	A	-	-	-	-	-	-	29	0	0	67	15	22.3880597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.106233538	1.106233538	1	0	0.00125	0.99875	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215892133	10	110174651	G	A	-	-	-	-	-	-	32	0	0	76	18	23.68421053	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.170278638	1.170278638	1	0	0.00125	0.99875	0	0	0	0	3	3.63E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215892166	10	110308747	G	A	-	-	-	-	-	-	37	0	0	86	9	10.46511628	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.517099863	0.517099863	1	0.01125	0.235	0.75375	0	0	0	0	3	6.35E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215892179	10	110436826	C	A	-	-	-	-	-	-	33	0	0	49	10	20.40816327	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.008403361	1.008403361	1	0	0.00375	0.99625	0	0	0	0	3	6.72E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215892229	10	110764930	T	A	-	-	-	-	-	-	45	0	0	85	19	22.35294118	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.10449827	1.10449827	1	0	0.00125	0.99875	0	0	0	0	3	5.93E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215892487	10	113178315	C	A	-	-	-	-	-	-	32	0	0	82	14	17.07317073	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.843615495	0.843615495	1	0	0.0025	0.9975	0	0	0	0	3	9.77E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215892536	10	113602343	T	A	-	-	-	-	-	-	32	0	0	76	23	30.26315789	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.495356037	0.747678019	2	0	0.01125	0.98875	0	0	0	0	3	1.58E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215892707	10	114913784	T	A	TCF7L2	CCDS7576.1	r.?	-	-	intronic	29	0	0	13	4	30.76923077	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.520361991	1.520361991	1	0	0.0075	0.9925	0	0	0	0	3	4.31E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215892966	10	117000002	T	A	ATRNL1	CCDS7592.1	r.?	-	-	intronic	36	0	0	52	6	11.53846154	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.570135747	0.570135747	1	0.0025	0.1	0.8975	0	0	0	0	3	2.61E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215893000	10	117278589	C	A	ATRNL1	CCDS7592.1	r.?	-	-	intronic	44	0	0	76	18	23.68421053	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.170278638	1.170278638	1	0	0	1	0	0	0	0	3	3.63E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215893226	10	119281025	T	A	-	-	-	-	-	-	34	0	0	90	17	18.88888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.933333333	0.933333333	1	0	0.00125	0.99875	0	0	0	0	3	5.05E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215893754	10	123152994	G	A	-	-	-	-	-	-	37	0	0	104	20	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0	1	0	0	0	0	3	8.16E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215894098	10	125704925	G	A	-	-	-	-	-	-	33	0	0	79	18	22.78481013	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.125837677	1.125837677	1	0	0	1	0	0	0	0	3	7.86E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215894108	10	125769243	G	A	CHST15	CCDS7638.1	r.2842c>u	c.?	p.?	3'UTR variant	36	0	0	42	10	23.80952381	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.176470588	1.176470588	1	0	0.00125	0.99875	0	0	0	0	3	1.24E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215894233	10	127035057	C	A	-	-	-	-	-	-	30	0	0	58	13	22.4137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.107505071	1.107505071	1	0	0	1	0	0	0	0	3	3.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215894680	10	128517533	T	A	-	-	-	-	-	-	41	0	0	83	19	22.89156627	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.131112686	1.131112686	1	0	0	1	0	0	0	0	3	3.60E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215894891	10	130491734	C	A	-	-	-	-	-	-	42	0	0	20	4	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0.00125	0.01375	0.985	0	0	0	0	3	2.84E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215894942	10	131064744	G	A	-	-	-	-	-	-	37	0	0	77	14	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.00375	0.99625	0	0	0	0	3	3.82E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215895053	10	132209282	T	A	-	-	-	-	-	-	34	0	0	43	13	30.23255814	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.493844049	1.493844049	1	0	0	1	0	0	0	0	3	3.88E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215895143	10	132846583	C	A	-	-	-	-	-	-	43	0	0	60	9	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.0225	0.9775	0	0	0	0	3	2.29E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215895246	10	134065208	C	A	STK32C	CCDS7666.1	r.?	-	-	intronic	53	0	0	11	3	27.27272727	0	0	NA	0	0	NA							0.102572332	0	0	0.897427668	1	0	0.102572332	unphased	0.284658764	0.284658764	1	0.285	0.7	0.015	0	0	0	0	2	2.00E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215895834	11	2507350	C	A	KCNQ1	CCDS7736.1	r.?	-	-	intronic	37	0	0	76	10	13.15789474	0	0	NA	0	0	NA							0.446583235	0	0	0.553416765	1	0	0.446583235	unphased	0.182599961	0.182599961	1	0.95625	0.04375	0	0	0	0	0	1	6.90E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215895855	11	2890308	C	A	-	-	-	-	-	-	29	0	0	12	6	50	0	0	NA	0	0	NA							0.446583235	0	0	0.553416765	1	0	0.446583235	unphased	0.693879853	0.693879853	1	0.0025	0.0375	0.96	0	0	0	0	3	1.41E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215896174	11	5087152	C	A	-	-	-	-	-	-	32	0	0	71	20	28.16901408	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.110190555	1.110190555	1	0	0	1	0	0	0	0	3	1.68E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215896262	11	5819763	G	A	TRIM5	CCDS31392.1	r.?	-	-	intronic	41	0	0	65	12	18.46153846	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.72760181	0.72760181	1	0	0.03	0.97	0	0	0	0	3	7.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215897846	11	21431405	C	A	NELL1	CCDS7855.1	r.?	-	-	intronic	38	0	0	79	16	20.25316456	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.000744602	1.000744602	1	0	0	1	0	0	0	0	3	2.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215898115	11	23247481	C	A	-	-	-	-	-	-	32	0	0	92	26	28.26086957	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.396419437	0.698209719	2	0	0.04125	0.95875	0	0	0	0	3	6.14E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215898260	11	23983919	C	A	-	-	-	-	-	-	26	0	0	33	5	15.15151515	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.748663102	0.748663102	1	0.00125	0.0225	0.97625	0	0	0	0	3	6.60E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215898400	11	24854999	C	A	LUZP2	CCDS31446.1	r.?	-	-	intronic	22	0	0	50	15	30	269	0	0	509	106	20.82514735							4	2	2	1	NA	NA	NA	unphased	1.482352941	1.482352941	1	0	0	1	0	0	0	0	3	5.83E-23	1	9.11E-134	1	YES	somatic	1_1
1353824	PD9772b	1215898593	11	25839366	T	A	-	-	-	-	-	-	56	0	0	94	21	22.34042553	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.10387985	1.10387985	1	0	0	1	0	0	0	0	3	1.60E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215898676	11	26384332	G	A	ANO3	CCDS31447.1	r.?	-	-	intronic	45	0	0	88	14	15.90909091	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.786096257	0.786096257	1	0	0.02	0.98	0	0	0	0	3	2.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215898730	11	26592492	C	A	ANO3	CCDS31447.1	r.?	-	-	intronic	32	0	0	79	11	13.92405063	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.688011914	0.688011914	1	0.0025	0.0475	0.95	0	0	0	0	3	3.23E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215899175	11	29459335	G	A	-	-	-	-	-	-	40	0	0	87	14	16.09195402	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.795131846	0.795131846	1	0	0.015	0.985	0	0	0	0	3	2.35E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215899254	11	30309154	T	A	-	-	-	-	-	-	42	0	0	81	10	12.34567901	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.610021786	0.610021786	1	0.00125	0.07625	0.9225	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215899356	11	31258854	C	A	-	-	-	-	-	-	41	0	0	83	12	14.45783133	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.71438696	0.71438696	1	0	0.02875	0.97125	0	0	0	0	3	1.70E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215899487	11	32503501	G	A	-	-	-	-	-	-	29	0	0	25	8	32	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.261176471	1.261176471	1	0	0.0025	0.9975	0	0	0	0	3	3.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215899827	11	35538358	T	A	PAMR1	CCDS7898.1	r.?	-	-	intronic	32	0	0	92	21	22.82608696	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.127877238	1.127877238	1	0	0	1	0	0	0	0	3	9.72E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215899856	11	35884587	T	A	ENSG00000186082	ENST00000333983	r.?	-	-	upstream	40	0	0	82	13	15.85365854	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.783357245	0.783357245	1	0	0.0125	0.9875	0	0	0	0	3	3.95E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215900263	11	38325962	G	A	-	-	-	-	-	-	37	0	0	97	13	13.40206186	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.796240146	0.796240146	1	0	0.015	0.985	0	0	0	0	3	3.85E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215900413	11	39022291	T	A	-	-	-	-	-	-	41	0	0	77	28	36.36363636	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.160427807	1.080213904	2	0	0	1	0	0	0	0	3	2.30E-44	1	1	1	NA	NA	NA
1353824	PD9772b	1215900769	11	40859689	G	A	-	-	-	-	-	-	42	0	0	92	23	25	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.485294118	0.742647059	2	0	0.01375	0.98625	0	0	0	0	3	2.41E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215900849	11	41345254	C	A	-	-	-	-	-	-	34	0	0	89	12	13.48314607	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.801057502	0.801057502	1	0	0.0125	0.9875	0	0	0	0	3	4.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215900952	11	42034565	C	A	-	-	-	-	-	-	43	0	0	99	18	18.18181818	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.080213904	1.080213904	1	0	0	1	0	0	0	0	3	6.53E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215900953	11	42036726	G	A	-	-	-	-	-	-	40	0	0	79	28	35.44303797	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.105733433	1.052866716	2	0	0	1	0	0	0	0	3	5.51E-44	1	1	1	NA	NA	NA
1353824	PD9772b	1215900982	11	42165320	T	A	-	-	-	-	-	-	27	0	0	77	11	14.28571429	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.848739496	0.848739496	1	0	0.0075	0.9925	0	0	0	0	3	2.41E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215901119	11	43083376	G	A	-	-	-	-	-	-	47	0	0	68	12	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.00625	0.99375	0	0	0	0	3	1.37E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215901194	11	43636642	C	A	-	-	-	-	-	-	28	0	0	84	19	22.61904762	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.117647059	1.117647059	1	0	0	1	0	0	0	0	3	4.62E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215901337	11	44939144	T	A	TSPAN18	CCDS7910.1	r.?	-	-	intronic	20	0	0	28	7	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.0025	0.9975	0	0	0	0	3	8.44E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215901576	11	47004051	C	A	C11orf49	CCDS41641.1	r.?	-	-	intronic	35	0	0	70	19	27.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.341176471	1.341176471	1	0	0	1	0	0	0	0	3	9.50E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215902538	11	49928074	C	A	-	-	-	-	-	-	34	0	0	78	17	21.79487179	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	1.076923077	1.076923077	1	0	0.00125	0.99875	0	0	0	0	3	3.59E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215902549	11	49987242	G	A	-	-	-	-	-	-	38	0	0	75	11	14.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.724705882	0.724705882	1	0	0.02	0.98	0	0	0	0	3	1.78E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215903580	11	55740261	C	A	OR10AG1	CCDS31514.1	r.?	-	-	upstream	39	0	0	77	18	23.37662338	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.155080214	1.155080214	1	0	0	1	0	0	0	0	3	4.71E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215903654	11	56225883	T	A	OR5M9	CCDS31531.1	r.?	-	-	downstream	34	0	0	84	13	15.47619048	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.0175	0.9825	0	0	0	0	3	5.49E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215903829	11	57380342	C	A	SERPING1	CCDS7962.1	r.?	-	-	intronic	27	0	0	47	10	21.27659574	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.051314143	1.051314143	1	0	0.00125	0.99875	0	0	0	0	3	4.27E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215904003	11	58569661	C	A	-	-	-	-	-	-	29	0	0	84	21	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.15E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215904050	11	59012302	G	A	-	-	-	-	-	-	29	0	0	43	5	11.62790698	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.574555404	0.574555404	1	0.00875	0.0725	0.91875	0	0	0	0	3	2.57E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215904152	11	59753879	G	A	-	-	-	-	-	-	31	0	0	80	18	22.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.111764706	1.111764706	1	0	0.0025	0.9975	0	0	0	0	3	1.01E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215904294	11	60958983	G	A	-	-	-	-	-	-	28	0	0	87	25	28.73563218	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.419878296	0.709939148	2	0	0.0375	0.9625	0	0	0	0	3	9.55E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1215904320	11	61212331	G	A	SDHAF2	CCDS8007.1	r.?	-	-	intronic	41	0	0	34	5	14.70588235	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.726643599	0.726643599	1	0.00125	0.02875	0.97	0	0	0	0	3	7.71E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215904696	11	64720853	C	A	C11orf85	CCDS31603.1	r.?	-	-	intronic	37	0	0	57	12	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0.00125	0.99875	0	0	0	0	3	1.40E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215905184	11	69344110	G	A	-	-	-	-	-	-	26	0	0	8	4	50	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.470588235	1.235294118	2	0	0.00625	0.99375	0	0	0	0	3	4.31E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215905271	11	70059780	G	A	-	-	-	-	-	-	18	0	0	60	10	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0.00125	0.0075	0.99125	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215905353	11	70955124	C	A	SHANK2	ENST00000413503	r.?	-	-	intronic	44	0	0	52	13	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	6.47E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215905475	11	71587166	G	A	ENSG00000225805	ENST00000411709	r.?	-	-	upstream	51	0	0	75	17	22.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.12	1.12	1	0	0	1	0	0	0	0	3	1.72E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215905519	11	71891923	T	A	-	-	-	-	-	-	31	0	0	95	23	24.21052632	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.19628483	1.19628483	1	0	0	1	0	0	0	0	3	5.51E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215905559	11	72206525	T	A	-	-	-	-	-	-	31	0	0	17	3	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.02125	0.97875	0	0	0	0	3	8.07E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215905901	11	74896466	G	A	SLCO2B1	CCDS8235.1	r.?	-	-	intronic	33	0	0	34	7	20.58823529	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.017301038	1.017301038	1	0.00125	0.0125	0.98625	0	0	0	0	3	3.73E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215905903	11	74897160	C	A	SLCO2B1	CCDS8235.1	r.?	-	-	intronic	32	0	0	51	10	19.60784314	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.968858131	0.968858131	1	0	0.005	0.995	0	0	0	0	3	1.04E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215906175	11	77205000	T	A	-	-	-	-	-	-	27	0	0	66	17	25.75757576	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.272727273	1.272727273	1	0	0.00125	0.99875	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215906210	11	77526801	T	A	RSF1	CCDS8253.1	r.?	-	-	intronic	52	0	0	102	7	6.862745098	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.339100346	0.339100346	1	0.185	0.715	0.1	0	0	0	0	2	9.53E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215906294	11	78126499	T	A	GAB2	CCDS8259.1	r.?	-	-	intronic	40	0	0	70	12	17.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.847058824	0.847058824	1	0	0.00375	0.99625	0	0	0	0	3	1.99E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215906450	11	79385273	C	A	-	-	-	-	-	-	43	0	0	87	18	20.68965517	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.022312373	1.022312373	1	0	0.00125	0.99875	0	0	0	0	3	5.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215906482	11	79590119	T	A	-	-	-	-	-	-	39	0	0	98	15	15.30612245	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.756302521	0.756302521	1	0.00125	0.01375	0.985	0	0	0	0	3	3.78E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215906696	11	81456050	C	A	-	-	-	-	-	-	28	0	0	19	10	52.63157895	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.600619195	1.300309598	2	0	0.0025	0.9975	0	0	0	0	3	8.66E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215906780	11	81928182	G	A	AP002802.1	ENST00000500502	r.?	-	-	intronic	26	0	0	80	20	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	2.53E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215906889	11	82674489	T	A	-	-	-	-	-	-	34	0	0	66	12	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.0075	0.9925	0	0	0	0	3	9.36E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215907128	11	84591149	T	A	DLG2	CCDS41696.1	r.?	-	-	intronic	41	0	0	85	18	21.17647059	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.046366782	1.046366782	1	0	0	1	0	0	0	0	3	3.35E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215907131	11	84661722	T	A	DLG2	CCDS44690.1	r.?	-	-	intronic	38	0	0	66	19	28.78787879	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.422459893	1.422459893	1	0	0	1	0	0	0	0	3	2.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215907154	11	84942358	T	A	DLG2	CCDS44690.1	r.?	-	-	intronic	36	0	0	79	16	20.25316456	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.000744602	1.000744602	1	0	0	1	0	0	0	0	3	2.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215907867	11	90223889	T	A	-	-	-	-	-	-	34	0	0	70	16	22.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.129411765	1.129411765	1	0	0.00125	0.99875	0	0	0	0	3	2.93E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215907949	11	90736357	G	A	-	-	-	-	-	-	30	0	0	54	14	25.92592593	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.281045752	1.281045752	1	0	0	1	0	0	0	0	3	1.64E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215908006	11	91091495	T	A	-	-	-	-	-	-	35	0	0	93	24	25.80645161	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.275142315	1.275142315	1	0	0	1	0	0	0	0	3	4.66E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215908391	11	93933610	C	A	-	-	-	-	-	-	36	0	0	87	17	19.54022989	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.965517241	0.965517241	1	0	0.00125	0.99875	0	0	0	0	3	2.71E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215908744	11	97194736	G	A	-	-	-	-	-	-	43	0	0	69	25	36.23188406	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.427962489	0.713981245	2	0	0.03125	0.96875	0	0	0	0	3	1.00E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1215908769	11	97490414	T	A	-	-	-	-	-	-	41	0	0	60	24	40	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.576470588	0.788235294	2	0	0.01	0.99	0	0	0	0	3	1.81E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1215908817	11	97970866	C	A	-	-	-	-	-	-	36	0	0	34	16	47.05882353	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.85467128	0.92733564	2	0	0	1	0	0	0	0	3	3.09E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215909072	11	100392464	C	A	-	-	-	-	-	-	38	0	0	57	12	21.05263158	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.829721362	0.829721362	1	0	0.01125	0.98875	0	0	0	0	3	1.40E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215909481	11	103920648	G	A	PDGFD	CCDS41703.1	r.?	-	-	intronic	36	0	0	73	18	24.65753425	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.971796938	0.971796938	1	0	0	1	0	0	0	0	3	1.62E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215909531	11	104483506	G	A	-	-	-	-	-	-	29	0	0	64	19	29.6875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.170036765	1.170036765	1	0	0	1	0	0	0	0	3	1.34E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215909830	11	107327122	G	A	CWF19L2	CCDS8336.2	r.?	-	-	intronic	35	0	0	62	11	17.74193548	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.699240987	0.699240987	1	0.00125	0.035	0.96375	0	0	0	0	3	1.96E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215909867	11	107646619	G	A	ENSG00000214306	ENST00000398068	r.?	-	-	intronic	33	0	0	23	6	26.08695652	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.028132992	1.028132992	1	0	0.00875	0.99125	0	0	0	0	3	1.47E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215910090	11	109912241	G	A	-	-	-	-	-	-	34	0	0	57	14	24.56140351	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.968008256	0.968008256	1	0	0.00125	0.99875	0	0	0	0	3	3.84E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215910183	11	110696180	T	A	-	-	-	-	-	-	46	0	0	63	12	19.04761905	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.75070028	0.75070028	1	0	0.02375	0.97625	0	0	0	0	3	5.15E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215910231	11	111049213	C	A	-	-	-	-	-	-	35	0	0	38	16	42.10526316	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.659442724	0.829721362	2	0	0.00375	0.99625	0	0	0	0	3	3.06E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215910350	11	112020215	C	A	IL18	CCDS44731.1	r.?	-	-	intronic	38	0	0	68	9	13.23529412	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.653979239	0.653979239	1	0	0.06625	0.93375	0	0	0	0	3	7.38E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215910446	11	112675590	G	A	-	-	-	-	-	-	34	0	0	91	33	36.26373626	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.791855204	0.895927602	2	0	0	1	0	0	0	0	3	5.82E-52	1	1	1	NA	NA	NA
1353824	PD9772b	1215910872	11	115600673	C	A	-	-	-	-	-	-	33	0	0	62	19	30.64516129	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.514231499	0.75711575	2	0	0.00875	0.99125	0	0	0	0	3	6.66E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215910941	11	116082073	G	A	-	-	-	-	-	-	33	0	0	53	9	16.98113208	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.839067703	0.839067703	1	0.00125	0.01625	0.9825	0	0	0	0	3	7.10E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215911122	11	117432753	T	A	DSCAML1	CCDS8384.1	r.?	-	-	intronic	46	0	0	40	18	45	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.223529412	1.111764706	2	0	0	1	0	0	0	0	3	3.90E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215911175	11	118110371	C	A	MPZL3	CCDS8392.1	r.?	-	-	intronic	33	0	0	58	13	22.4137931	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.88336714	0.88336714	1	0	0.00625	0.99375	0	0	0	0	3	3.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215911280	11	118827900	C	A	UPK2	CCDS8404.1	r.?	-	-	intronic	26	0	0	11	8	72.72727273	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	2.86631016	1.43315508	2	0	0	1	0	0	0	0	3	6.36E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215911318	11	119121871	C	A	CBL	CCDS8418.1	r.?	-	-	intronic	22	0	0	41	9	21.95121951	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.865136298	0.865136298	1	0	0.01	0.99	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215911663	11	122806677	T	A	C11orf63	CCDS8438.1	r.?	-	-	intronic	45	0	0	57	14	24.56140351	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.968008256	0.968008256	1	0	0.0025	0.9975	0	0	0	0	3	3.84E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215911697	11	123160210	G	A	-	-	-	-	-	-	22	0	0	21	7	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.005	0.995	0	0	0	0	3	8.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215911748	11	123734611	T	A	-	-	-	-	-	-	46	0	0	75	21	28	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.103529412	1.103529412	1	0	0	1	0	0	0	0	3	7.75E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215911807	11	124343581	T	A	-	-	-	-	-	-	39	0	0	71	21	29.57746479	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.165700083	1.165700083	1	0	0	1	0	0	0	0	3	2.05E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215911808	11	124352545	G	A	-	-	-	-	-	-	29	0	0	21	5	23.80952381	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.93837535	0.93837535	1	0.00125	0.01125	0.9875	0	0	0	0	3	5.95E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215912485	11	131539389	G	A	OPCML	CCDS41733.1	r.?	-	-	intronic	22	0	0	40	9	22.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.886764706	0.886764706	1	0	0.00625	0.99375	0	0	0	0	3	4.64E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215912556	11	132242720	T	A	-	-	-	-	-	-	41	0	0	68	17	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215912602	11	132604503	C	A	ENSG00000183715	CCDS8492.1	r.?	-	-	intronic	28	0	0	66	12	18.18181818	2	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.71657754	0.71657754	1	0	0.03125	0.96875	0	0	0	0	3	9.36E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215912609	11	132765468	G	A	ENSG00000183715	CCDS8492.1	r.?	-	-	intronic	29	0	0	69	17	24.63768116	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.971014493	0.971014493	1	0	0.00125	0.99875	0	0	0	0	3	3.56E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215912639	11	133248709	C	A	ENSG00000183715	CCDS31722.1	r.?	-	-	intronic	33	0	0	47	11	23.40425532	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.922403004	0.922403004	1	0	0.00375	0.99625	0	0	0	0	3	7.21E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215912672	11	133769591	G	A	-	-	-	-	-	-	29	0	0	34	5	14.70588235	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.579584775	0.579584775	1	0.00125	0.07875	0.92	0	0	0	0	3	7.71E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215913168	12	1550553	G	A	ERC1	CCDS8508.1	r.?	-	-	intronic	34	0	0	72	16	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	4.82E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215913248	12	1930811	C	A	CACNA2D4	CCDS44785.1	r.?	-	-	intronic	34	0	0	5	4	80	196	1	0.510204082	10	0	0							4	2	2	1	NA	NA	NA	unphased	3.952941176	1.976470588	2	0	0.0025	0.99625	0	0	0	0.00125	3	3.11E-09	1	1	0.625610357	NA	NA	NA
1353824	PD9772b	1215913283	12	2245553	G	A	CACNA1C	CCDS44794.1	r.?	-	-	intronic	30	0	0	54	9	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01375	0.98625	0	0	0	0	3	8.48E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215913755	12	4682975	T	A	-	-	-	-	-	-	22	0	0	61	20	32.78688525	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.620057859	0.81002893	2	0	0.0025	0.9975	0	0	0	0	3	4.89E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215913762	12	4711219	C	A	DYRK4	CCDS8530.1	r.?	-	-	intronic	37	0	0	106	29	27.35849057	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.351831299	0.675915649	2	0	0.0825	0.9175	0	0	0	0	3	1.15E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1215913815	12	4953648	C	A	KCNA6	CCDS8534.1	r.?	-	-	intronic	27	0	0	115	14	12.17391304	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.601534527	0.601534527	1	0	0.165	0.835	0	0	0	0	3	1.36E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215913897	12	5451322	T	A	-	-	-	-	-	-	31	0	0	117	21	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.00125	0.99875	0	0	0	0	3	2.36E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215913970	12	5862560	G	A	ANO2	CCDS44807.1	r.?	-	-	intronic	44	0	0	107	18	16.82242991	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.831225948	0.831225948	1	0	0.01	0.99	0	0	0	0	3	2.90E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215914158	12	6681485	G	A	CHD4	CCDS8552.1	r.?	-	-	intronic	19	0	0	34	5	14.70588235	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.726643599	0.726643599	1	0.00125	0.03	0.96875	0	0	0	0	3	7.71E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215914286	12	7449490	T	A	-	-	-	-	-	-	32	0	0	90	17	18.88888889	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.311111111	1.311111111	1	0	0	1	0	0	0	0	3	5.05E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215914544	12	8401547	G	A	-	-	-	-	-	-	43	0	0	105	11	10.47619048	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.727170868	0.727170868	1	0	0.03125	0.96875	0	0	0	0	3	7.90E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215914572	12	8470363	C	A	-	-	-	-	-	-	30	0	0	124	19	15.32258065	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.063567362	1.063567362	1	0	0	1	0	0	0	0	3	1.33E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215914907	12	10078512	G	A	CLEC2A	CCDS44829.1	r.?	-	-	intronic	40	0	0	104	16	15.38461538	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.067873303	1.067873303	1	0	0.00375	0.99625	0	0	0	0	3	2.67E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215915081	12	10686043	C	A	-	-	-	-	-	-	45	0	0	130	15	11.53846154	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.800904977	0.800904977	1	0	0.01	0.99	0	0	0	0	3	3.01E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215915634	12	12196173	T	A	-	-	-	-	-	-	35	0	0	104	17	16.34615385	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.134615385	1.134615385	1	0	0.0025	0.9975	0	0	0	0	3	6.94E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215916779	12	17515442	T	A	-	-	-	-	-	-	37	0	0	106	16	15.09433962	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.04772475	1.04772475	1	0	0.00125	0.99875	0	0	0	0	3	3.68E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215916842	12	17840270	C	A	-	-	-	-	-	-	40	0	0	114	17	14.9122807	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.035087719	1.035087719	1	0	0	1	0	0	0	0	3	3.58E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215916890	12	17988489	G	A	-	-	-	-	-	-	37	0	0	96	13	13.54166667	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.93995098	0.93995098	1	0	0.00125	0.99875	0	0	0	0	3	3.35E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215916924	12	18226392	T	A	-	-	-	-	-	-	44	0	0	112	12	10.71428571	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.743697479	0.743697479	1	0	0.02625	0.97375	0	0	0	0	3	6.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215916972	12	18568132	C	A	PIK3C2G	CCDS44839.1	r.?	-	-	intronic	33	0	0	126	20	15.87301587	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.101774043	1.101774043	1	0	0	1	0	0	0	0	3	4.89E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215917001	12	18833275	G	A	PLCZ1	CCDS8680.1	r.?	-	-	downstream	35	0	0	116	34	29.31034483	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.034482759	1.017241379	2	0	0	1	0	0	0	0	3	9.44E-50	1	1	1	NA	NA	NA
1353824	PD9772b	1215917053	12	19097354	C	A	-	-	-	-	-	-	41	0	0	87	20	22.98850575	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.595672752	0.797836376	2	0	0.00625	0.99375	0	0	0	0	3	1.65E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215917212	12	19666939	T	A	AEBP2	CCDS44842.1	r.?	-	-	intronic	31	0	0	104	8	7.692307692	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.533936652	0.533936652	1	0.0075	0.16875	0.82375	0	0	0	0	3	6.57E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215917653	12	21266071	T	A	-	-	-	-	-	-	33	0	0	69	26	37.68115942	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.615515772	0.871838591	3	0	0.0025	0.9975	0	0	0	0	3	8.50E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1215917905	12	22284950	T	A	-	-	-	-	-	-	32	0	0	91	16	17.58241758	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.220426632	1.220426632	1	0	0	1	0	0	0	0	3	2.79E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215918118	12	23283039	T	A	-	-	-	-	-	-	36	0	0	93	12	12.90322581	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.895635674	0.895635674	1	0	0.0075	0.9925	0	0	0	0	3	6.99E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215918154	12	23519011	T	A	-	-	-	-	-	-	39	0	0	81	21	25.92592593	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.281045752	1.281045752	1	0	0	1	0	0	0	0	3	4.88E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215918173	12	23666409	C	A	-	-	-	-	-	-	31	0	0	70	15	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.0025	0.9975	0	0	0	0	3	1.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215918356	12	25107126	T	A	BCAT1	CCDS44845.1	r.?	-	-	upstream	32	0	0	70	6	8.571428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.423529412	0.423529412	1	0.0575	0.36	0.5825	0	0	0	0	3	1.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215918443	12	25549031	G	A	-	-	-	-	-	-	37	0	0	42	6	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0	0.03625	0.96375	0	0	0	0	3	7.02E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215918472	12	25758394	G	A	IFLTD1	CCDS44847.1	r.?	-	-	intronic	22	0	0	40	7	17.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.864705882	0.864705882	1	0	0.0125	0.9875	0	0	0	0	3	1.26E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215918484	12	25833805	T	A	-	-	-	-	-	-	37	0	0	62	13	20.96774194	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.036053131	1.036053131	1	0	0.0025	0.9975	0	0	0	0	3	8.08E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215918832	12	28001346	T	A	-	-	-	-	-	-	30	0	0	76	13	17.10526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.845201238	0.845201238	1	0	0.01	0.99	0	0	0	0	3	1.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215918988	12	29126116	G	A	-	-	-	-	-	-	30	0	0	68	11	16.17647059	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.799307958	0.799307958	1	0	0.0125	0.9875	0	0	0	0	3	5.76E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215919358	12	31807860	C	A	C12orf72	CCDS8724.1	r.?	-	-	upstream	30	0	0	48	12	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.00125	0.99875	0	0	0	0	3	1.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215919567	12	33204727	C	A	-	-	-	-	-	-	42	0	0	76	12	15.78947368	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.780185759	0.780185759	1	0	0.00625	0.99375	0	0	0	0	3	5.63E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215919694	12	34119306	C	A	-	-	-	-	-	-	37	0	0	64	11	17.1875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.849264706	0.849264706	1	0	0.01375	0.98625	0	0	0	0	3	2.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215919718	12	34249186	G	A	AC046130.1	ENST00000501954	r.?	-	-	intronic	40	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0	1	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215920399	12	37984787	C	A	-	-	-	-	-	-	33	0	0	76	15	19.73684211	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0.0025	0.9975	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215921337	12	40415262	T	A	SLC2A13	CCDS8736.2	r.?	-	-	intronic	37	0	0	79	6	7.594936709	0	0	NA	0	0	NA							3.063696442	2	1	0.936303558	2	2	0.063696442	unphased	0.304167563	0.304167563	1	0.265	0.66625	0.06875	0	0	0	0	2	3.18E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215921458	12	41378822	T	A	CNTN1	CCDS8737.1	r.?	-	-	intronic	31	0	0	68	16	23.52941176	0	0	NA	0	0	NA							3.063696442	2	1	0.936303558	2	2	0.063696442	unphased	0.942323038	0.942323038	1	0	0	1	0	0	0	0	3	1.75E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215921669	12	43153933	G	A	-	-	-	-	-	-	34	0	0	58	15	25.86206897	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.019269777	1.019269777	1	0	0.0025	0.9975	0	0	0	0	3	7.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215922015	12	46824538	G	A	-	-	-	-	-	-	39	0	0	54	12	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.00625	0.99375	0	0	0	0	3	6.90E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215922170	12	48159805	C	A	-	-	-	-	-	-	47	0	0	41	10	24.3902439	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.961262554	0.961262554	1	0	0.01125	0.98875	0	0	0	0	3	9.51E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215922326	12	49497613	C	A	LMBR1L	CCDS8780.2	r.?	-	-	intronic	44	0	0	41	13	31.70731707	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.24964132	1.24964132	1	0	0.00125	0.99875	0	0	0	0	3	1.89E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215922453	12	50914706	T	A	DIP2B	CCDS31799.1	r.?	-	-	intronic	31	0	0	39	13	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.00125	0.99875	0	0	0	0	3	8.79E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215922500	12	51282897	T	A	TMPRSS12	CCDS44881.1	r.?	-	-	downstream	46	0	0	54	16	29.62962963	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.167755991	1.167755991	1	0	0	1	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215922517	12	51436648	G	A	-	-	-	-	-	-	32	0	0	35	5	14.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.56302521	0.56302521	1	0.005	0.0725	0.9225	0	0	0	0	3	8.95E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215923615	12	60793543	C	A	-	-	-	-	-	-	29	0	0	79	12	15.18987342	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.750558451	0.750558451	1	0	0.02375	0.97625	0	0	0	0	3	9.17E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215923645	12	61151715	T	A	-	-	-	-	-	-	37	0	0	74	19	25.67567568	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.268680445	1.268680445	1	0	0	1	0	0	0	0	3	3.14E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215923741	12	61869736	G	A	-	-	-	-	-	-	29	0	0	75	14	18.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0	1	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215924060	12	64241517	C	A	SRGAP1	CCDS8967.1	r.?	-	-	intronic	30	0	0	33	7	21.21212121	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.048128342	1.048128342	1	0	0.00875	0.99125	0	0	0	0	3	2.98E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215924143	12	64792091	G	A	-	-	-	-	-	-	42	0	0	70	15	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.00125	0.99875	0	0	0	0	3	1.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215924271	12	65674247	T	A	MSRB3	CCDS31853.1	r.?	-	-	intronic	31	0	0	82	21	25.6097561	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.265423242	1.265423242	1	0	0	1	0	0	0	0	3	6.53E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215925034	12	70810211	T	A	KCNMB4	CCDS8997.1	r.?	-	-	intronic	43	0	0	90	23	25.55555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.262745098	1.262745098	1	0	0	1	0	0	0	0	3	1.36E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215925118	12	71397114	T	A	-	-	-	-	-	-	30	0	0	92	17	18.47826087	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.913043478	0.913043478	1	0	0.00125	0.99875	0	0	0	0	3	7.54E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215925234	12	72366400	G	A	TPH2	CCDS31859.1	r.851g>a	c.710G>A	p.R237Q	missense	35	0	0	71	13	18.30985915	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.904722452	0.904722452	1	0	0.00125	0.99875	0	0	0	0	3	5.42E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215925255	12	72589814	T	A	-	-	-	-	-	-	35	0	0	90	18	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	1.03E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215925525	12	74578592	T	A	-	-	-	-	-	-	33	0	0	41	14	34.14634146	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.68723099	0.843615495	2	0	0.005	0.995	0	0	0	0	3	1.90E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215925572	12	74968970	G	A	-	-	-	-	-	-	35	0	0	68	13	19.11764706	1	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.753460208	0.753460208	1	0	0.01	0.99	0	0	0	0	3	2.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215925702	12	76407283	T	A	-	-	-	-	-	-	25	0	0	29	8	27.5862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.087221095	1.087221095	1	0	0.0075	0.9925	0	0	0	0	3	1.53E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215925779	12	77004865	G	A	-	-	-	-	-	-	34	0	0	74	21	28.37837838	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.118441971	1.118441971	1	0	0	1	0	0	0	0	3	5.60E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215926214	12	81824789	C	A	PPFIA2	ENST00000443686	r.?	-	-	intronic	37	0	0	60	16	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.0025	0.9975	0	0	0	0	3	1.86E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215926402	12	83910148	C	A	-	-	-	-	-	-	19	0	0	59	12	20.33898305	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.801595214	0.801595214	1	0	0.01	0.99	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215926734	12	87579536	G	A	-	-	-	-	-	-	34	0	0	81	27	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	1.32E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1215926980	12	90148285	C	A	-	-	-	-	-	-	33	0	0	75	16	21.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.054117647	1.054117647	1	0	0	1	0	0	0	0	3	9.88E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215926985	12	90156725	C	A	-	-	-	-	-	-	42	0	0	83	11	13.25301205	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.654854713	0.654854713	1	0.00125	0.0675	0.93125	0	0	0	0	3	5.66E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215927000	12	90274378	C	A	-	-	-	-	-	-	26	0	0	103	21	20.38834951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.007424329	1.007424329	1	0	0	1	0	0	0	0	3	1.31E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215927034	12	90515446	T	A	-	-	-	-	-	-	31	0	0	27	6	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.0075	0.9925	0	0	0	0	3	4.23E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215927175	12	91597329	C	A	-	-	-	-	-	-	31	0	0	71	20	28.16901408	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.391880696	1.391880696	1	0	0	1	0	0	0	0	3	1.68E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215927182	12	91647564	T	A	-	-	-	-	-	-	43	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0.00125	0.99875	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215927434	12	93512919	C	A	-	-	-	-	-	-	39	0	0	94	17	18.08510638	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.893617021	0.893617021	1	0	0	1	0	0	0	0	3	1.12E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215927616	12	94866418	C	A	-	-	-	-	-	-	27	0	0	96	10	10.41666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.618872549	0.618872549	1	0.00375	0.07125	0.925	0	0	0	0	3	7.45E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215928628	12	102173842	T	A	GNPTAB	CCDS9088.1	r.?	-	-	intronic	37	0	0	66	19	28.78787879	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.422459893	1.422459893	1	0	0	1	0	0	0	0	3	2.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215929287	12	107157999	T	A	RFX4	CCDS9106.1	r.?	-	-	downstream	41	0	0	77	21	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	1.46E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215929329	12	107460299	T	A	CRY1	CCDS9112.1	r.?	-	-	intronic	32	0	0	29	10	34.48275862	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.703853955	0.851926978	2	0	0.00625	0.99375	0	0	0	0	3	1.79E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215929397	12	108072355	C	A	-	-	-	-	-	-	36	0	0	71	12	16.90140845	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.835128418	0.835128418	1	0	0.005	0.995	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215930407	12	116910618	T	A	-	-	-	-	-	-	32	0	0	44	11	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	3.22E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215930408	12	116910920	G	A	-	-	-	-	-	-	28	0	0	65	26	40	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.576470588	0.788235294	2	0	0.005	0.995	0	0	0	0	3	1.24E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1215931024	12	122896363	G	A	CLIP1	CCDS9232.1	r.?	-	-	intronic	43	0	0	66	24	36.36363636	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.812393076	0.812393076	1	0	0	1	0	0	0	0	3	3.04E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215931387	12	126731472	T	A	-	-	-	-	-	-	30	0	0	86	26	30.23255814	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.675419825	0.675419825	1	0	0.08875	0.91125	0	0	0	0	3	8.05E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1215931646	12	128856653	C	A	-	-	-	-	-	-	27	0	0	69	26	37.68115942	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.841827608	0.841827608	1	0	0	1	0	0	0	0	3	8.50E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1215932124	12	133194605	T	A	P2RX2	CCDS31930.1	r.?	-	-	upstream	33	0	0	40	14	35	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.781928336	0.781928336	1	0	0.01	0.99	0	0	0	0	3	1.25E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215932338	13	19267712	T	A	-	-	-	-	-	-	34	0	0	58	10	17.24137931	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.679513185	0.679513185	1	0.00125	0.03	0.96875	0	0	0	0	3	4.10E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215932863	13	21117195	G	A	-	-	-	-	-	-	28	0	0	20	5	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.015	0.985	0	0	0	0	3	4.55E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215932927	13	21677691	C	A	-	-	-	-	-	-	24	0	0	22	9	40.90909091	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.612299465	1.612299465	1	0	0.0025	0.9975	0	0	0	0	3	9.16E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215933219	13	24489366	C	A	-	-	-	-	-	-	31	0	0	78	16	20.51282051	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.808446456	0.808446456	1	0	0.00625	0.99375	0	0	0	0	3	1.96E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215933270	13	24906377	T	A	-	-	-	-	-	-	36	0	0	65	11	16.92307692	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.666968326	0.666968326	1	0	0.04625	0.95375	0	0	0	0	3	3.41E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215933470	13	26315325	G	A	ATP8A2	CCDS41873.1	r.?	-	-	intronic	45	0	0	62	19	30.64516129	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.207779886	1.207779886	1	0	0	1	0	0	0	0	3	6.66E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215934127	13	32538108	G	A	-	-	-	-	-	-	42	0	0	56	16	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0.00125	0.99875	0	0	0	0	3	5.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215934435	13	35814526	G	A	NBEA	CCDS45026.1	r.?	-	-	intronic	42	1	2.380952381	62	17	27.41935484	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.080645161	1.080645161	1	0	0.00125	0.99875	0	0	0	0	3	4.56E-25	0.189842622	1	1	NA	NA	NA
1353824	PD9772b	1215934670	13	38088632	T	A	-	-	-	-	-	-	32	0	0	64	24	37.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.477941176	0.738970588	2	0	0.01625	0.98375	0	0	0	0	3	1.23E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215935178	13	43072675	G	A	-	-	-	-	-	-	28	0	0	60	20	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	3.30E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215935240	13	43573861	C	A	-	-	-	-	-	-	38	0	0	49	16	32.65306122	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.286914766	1.286914766	1	0	0	1	0	0	0	0	3	4.37E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215935935	13	50558394	C	A	-	-	-	-	-	-	40	0	0	54	15	27.77777778	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.094771242	1.094771242	1	0	0	1	0	0	0	0	3	2.20E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215936214	13	53646972	C	A	-	-	-	-	-	-	38	0	0	70	18	25.71428571	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.013445378	1.013445378	1	0	0	1	0	0	0	0	3	6.91E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215936249	13	54165827	C	A	-	-	-	-	-	-	41	0	0	63	12	19.04761905	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.75070028	0.75070028	1	0	0.01875	0.98125	0	0	0	0	3	5.15E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215936544	13	56911803	C	A	-	-	-	-	-	-	37	0	0	57	15	26.31578947	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.037151703	1.037151703	1	0	0.00125	0.99875	0	0	0	0	3	5.53E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215936584	13	57432932	T	A	-	-	-	-	-	-	48	0	0	58	16	27.5862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.087221095	1.087221095	1	0	0	1	0	0	0	0	3	1.00E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215936740	13	58800036	T	A	-	-	-	-	-	-	33	0	0	45	7	15.55555556	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.613071895	0.613071895	1	0.005	0.06875	0.92625	0	0	0	0	3	3.00E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215936776	13	59314299	G	A	-	-	-	-	-	-	33	0	0	60	13	21.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.853921569	0.853921569	1	0	0.00125	0.99875	0	0	0	0	3	5.07E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215937140	13	62605314	T	A	-	-	-	-	-	-	41	0	0	58	13	22.4137931	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.88336714	0.88336714	1	0	0.00125	0.99875	0	0	0	0	3	3.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215937616	13	65404471	C	A	-	-	-	-	-	-	36	0	0	70	22	31.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.238655462	1.238655462	1	0	0	1	0	0	0	0	3	1.63E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215937731	13	66651129	T	A	-	-	-	-	-	-	36	0	0	57	12	21.05263158	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.829721362	0.829721362	1	0	0.0125	0.9875	0	0	0	0	3	1.40E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215938115	13	70231840	G	A	-	-	-	-	-	-	38	0	0	55	9	16.36363636	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.644919786	0.644919786	1	0	0.04375	0.95625	0	0	0	0	3	1.01E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215938784	13	76767348	T	A	-	-	-	-	-	-	27	0	0	66	12	18.18181818	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.71657754	0.71657754	1	0	0.025	0.975	0	0	0	0	3	9.36E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215939253	13	81697156	T	A	-	-	-	-	-	-	26	0	0	64	19	29.6875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.170036765	1.170036765	1	0	0	1	0	0	0	0	3	1.34E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215939572	13	84741822	T	A	-	-	-	-	-	-	30	0	0	70	21	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0	1	0	0	0	0	3	1.45E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215939837	13	87496663	C	A	-	-	-	-	-	-	52	0	0	56	9	16.07142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.633403361	0.633403361	1	0	0.0725	0.9275	0	0	0	0	3	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215939846	13	87576439	G	A	-	-	-	-	-	-	37	0	0	37	12	32.43243243	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.278219396	1.278219396	1	0	0	1	0	0	0	0	3	4.03E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215940443	13	92932693	G	A	GPC5	CCDS9468.1	r.?	-	-	intronic	44	0	0	68	16	23.52941176	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.00125	0.99875	0	0	0	0	3	1.75E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215940481	13	93234735	G	A	GPC5	CCDS9468.1	r.?	-	-	intronic	42	0	0	73	13	17.80821918	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.701853344	0.701853344	1	0	0.0475	0.9525	0	0	0	0	3	7.97E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215940551	13	93904969	T	A	GPC6	CCDS9469.1	r.?	-	-	intronic	38	0	0	70	17	24.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.957142857	0.957142857	1	0	0	1	0	0	0	0	3	4.68E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215940673	13	95411161	T	A	AL139381.2	ENST00000505287	r.?	-	-	upstream	32	0	0	33	8	24.24242424	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.95543672	0.95543672	1	0	0.005	0.995	0	0	0	0	3	4.85E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215940674	13	95416546	T	A	AL139381.2	ENST00000505287	r.?	-	-	intronic	39	0	0	61	18	29.50819672	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.162970106	1.162970106	1	0	0.0025	0.9975	0	0	0	0	3	4.08E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215940985	13	98756838	T	A	-	-	-	-	-	-	30	0	0	29	8	27.5862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.087221095	1.087221095	1	0	0.00625	0.99375	0	0	0	0	3	1.53E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215941627	13	105383412	T	A	-	-	-	-	-	-	32	0	0	66	16	24.24242424	200	0	0	138	40	28.98550725							3	2	1	1	NA	NA	NA	unphased	0.95543672	0.95543672	1	0	0.0025	0.9975	0	0	0	0	3	1.03E-22	1	5.07E-58	1	YES	somatic	1_1
1353824	PD9772b	1215941736	13	106523951	C	A	-	-	-	-	-	-	30	0	0	65	15	23.07692308	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.909502262	0.909502262	1	0	0.005	0.995	0	0	0	0	3	5.00E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215941849	13	107579738	C	A	-	-	-	-	-	-	39	0	0	51	16	31.37254902	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.23644752	1.23644752	1	0	0	1	0	0	0	0	3	9.28E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215942042	13	109633875	G	A	MYO16	CCDS32008.1	r.?	-	-	intronic	33	0	0	51	11	21.56862745	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.85005767	0.85005767	1	0	0.01	0.99	0	0	0	0	3	1.94E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215942111	13	110432227	G	A	IRS2	CCDS9510.1	r.?	-	-	intronic	37	0	0	37	8	21.62162162	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.852146264	0.852146264	1	0	0.015	0.985	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215942120	13	110543223	C	A	-	-	-	-	-	-	23	0	0	44	15	34.09090909	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.343582888	1.343582888	1	0	0	1	0	0	0	0	3	6.12E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215942220	13	111669657	G	A	-	-	-	-	-	-	30	0	0	69	16	23.1884058	0	0	NA	0	0	NA							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.48280705	0.48280705	1	0.03375	0.87625	0.09	0	0	0	0	2	2.27E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215942317	13	112649332	T	A	-	-	-	-	-	-	31	0	0	68	31	45.58823529	0	0	NA	0	0	NA							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.94919511	0.94919511	1	0	0	1	0	0	0	0	3	8.53E-53	1	1	1	NA	NA	NA
1353824	PD9772b	1215942492	13	113903712	G	A	CUL4A	CCDS9533.1	r.?	-	-	intronic	31	0	0	73	12	16.43835616	0	0	NA	0	0	NA							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.342263902	0.342263902	1	0.2325	0.76625	0.00125	0	0	0	0	2	3.39E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215943404	14	19464952	T	A	-	-	-	-	-	-	37	0	0	43	9	20.93023256	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.824897401	0.824897401	1	0	0.015	0.985	0	0	0	0	3	9.45E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215943406	14	19466583	G	A	-	-	-	-	-	-	19	0	0	44	11	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	3.22E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215944006	14	22623394	G	A	TRAC	ENST00000446346	r.?	-	-	intronic	36	0	0	46	21	45.65217391	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.799232737	0.899616368	2	0	0	1	0	0	0	0	3	2.94E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215944054	14	23159700	C	A	-	-	-	-	-	-	44	0	0	52	22	42.30769231	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.667420814	0.833710407	2	0	0.00625	0.99375	0	0	0	0	3	5.59E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1215944180	14	24677854	G	A	CHMP4A	CCDS9619.1	r.?	-	-	downstream	38	0	0	30	10	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.00375	0.99625	0	0	0	0	3	2.68E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215944760	14	29851812	C	A	-	-	-	-	-	-	37	0	0	55	16	29.09090909	2	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.146524064	1.146524064	1	0	0	1	0	0	0	0	3	3.78E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215944831	14	30769819	C	A	AL121840.1	ENST00000508469	r.?	-	-	upstream	33	0	0	63	15	23.80952381	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.93837535	0.93837535	1	0	0	1	0	0	0	0	3	2.97E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215945050	14	32933622	C	A	AKAP6	CCDS9644.1	r.?	-	-	intronic	36	0	0	76	6	7.894736842	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.311145511	0.311145511	1	0.25875	0.67625	0.065	0	0	0	0	2	2.53E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215945099	14	33399093	C	A	-	-	-	-	-	-	38	0	0	48	7	14.58333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.574754902	0.574754902	1	0.005	0.105	0.89	0	0	0	0	3	4.81E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215945222	14	34628859	G	A	EGLN3	ENST00000487915	r.?	-	-	intronic	15	0	0	14	5	35.71428571	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.407563025	1.407563025	1	0	0.00375	0.99625	0	0	0	0	3	6.03E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215945238	14	34771915	G	A	-	-	-	-	-	-	29	0	0	21	6	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0.0075	0.9925	0	0	0	0	3	7.95E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215945905	14	41534491	T	A	-	-	-	-	-	-	28	0	0	50	11	22	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.867058824	0.867058824	1	0	0.005	0.995	0	0	0	0	3	1.52E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215945934	14	41793822	G	A	-	-	-	-	-	-	27	0	0	60	12	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.01	0.99	0	0	0	0	3	2.74E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215946007	14	42524113	C	A	-	-	-	-	-	-	40	0	0	67	16	23.88059701	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.0025	0.9975	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215946460	14	47237886	G	A	-	-	-	-	-	-	40	0	0	62	17	27.41935484	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.080645161	1.080645161	1	0	0	1	0	0	0	0	3	4.56E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215946671	14	49597600	C	A	-	-	-	-	-	-	34	0	0	53	12	22.64150943	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.892341842	0.892341842	1	0	0.0025	0.9975	0	0	0	0	3	5.39E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215947354	14	56331786	G	A	-	-	-	-	-	-	36	0	0	12	5	41.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.642156863	1.642156863	1	0	0.00125	0.99875	0	0	0	0	3	2.40E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215947452	14	57255251	C	A	-	-	-	-	-	-	34	0	0	60	15	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215947473	14	57406138	G	A	-	-	-	-	-	-	36	0	0	68	20	29.41176471	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.15916955	1.15916955	1	0	0	1	0	0	0	0	3	6.23E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215948233	14	65046379	G	A	C14orf50	CCDS9767.1	r.?	-	-	intronic	30	0	0	39	10	25.64102564	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.010558069	1.010558069	1	0	0.00375	0.99625	0	0	0	0	3	5.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215948406	14	66780169	G	A	-	-	-	-	-	-	30	0	0	81	19	23.45679012	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.924473493	0.924473493	1	0	0.00125	0.99875	0	0	0	0	3	2.15E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215948621	14	68759175	C	A	RAD51L1	CCDS9789.1	r.?	-	-	intronic	31	0	0	57	16	28.07017544	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.10629515	1.10629515	1	0	0.00125	0.99875	0	0	0	0	3	7.28E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215948741	14	70196423	C	A	-	-	-	-	-	-	28	0	0	66	16	24.24242424	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.95543672	0.95543672	1	0	0.0025	0.9975	0	0	0	0	3	1.03E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215949013	14	72798825	T	A	RGS6	CCDS9808.1	r.?	-	-	intronic	31	0	0	50	10	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.01375	0.98625	0	0	0	0	3	8.36E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215949667	14	79114646	T	A	NRXN3	CCDS9870.1	r.?	-	-	upstream	34	0	0	73	23	31.50684932	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.241740532	1.241740532	1	0	0	1	0	0	0	0	3	5.33E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215950608	14	88333091	G	A	-	-	-	-	-	-	34	1	2.941176471	64	16	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	5.94E-23	0.156694864	1	1	NA	NA	NA
1353824	PD9772b	1215950910	14	90976763	T	A	-	-	-	-	-	-	39	0	0	6	3	50	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.970588235	1.970588235	1	0	0.01125	0.98875	0	0	0	0	3	2.47E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215951079	14	92666416	C	A	-	-	-	-	-	-	38	0	0	65	14	21.53846154	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.848868778	0.848868778	1	0	0.005	0.995	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215951356	14	95999795	C	A	GLRX5	CCDS9936.1	r.?	-	-	upstream	27	0	0	48	9	18.75	250	0	0	11	2	18.18181818							3	2	1	1	NA	NA	NA	unphased	0.738970588	0.738970588	1	0.00125	0.01875	0.98	0	0	0	0	3	2.75E-12	1	0.001334363	1	NA	NA	NA
1353824	PD9772b	1215951798	14	101544727	G	A	-	-	-	-	-	-	35	0	0	23	8	34.7826087	2	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.37084399	1.37084399	1	0	0.00375	0.99625	0	0	0	0	3	1.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215952002	14	104441137	C	A	TDRD9	CCDS9987.2	r.?	-	-	intronic	39	0	0	50	17	34	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.34	1.34	1	0	0	1	0	0	0	0	3	6.43E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215952262	14	107000390	C	A	-	-	-	-	-	-	35	0	0	58	18	31.03448276	269	0	0	106	20	18.86792453							3	2	1	1	NA	NA	NA	unphased	1.223123732	1.223123732	1	0	0	1	0	0	0	0	3	1.42E-27	1	1.23E-25	1	YES	somatic	1_1
1353824	PD9772b	1215954674	15	22965565	G	A	CYFIP1	CCDS10009.1	r.?	-	-	intronic	34	0	0	26	6	23.07692308	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	1.114736532	1.114736532	1	0	0.01	0.99	0	0	0	0	3	3.30E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215954762	15	23484417	G	A	-	-	-	-	-	-	4	0	0	26	4	15.38461538	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	0.743157688	0.835620329	0.889348503	0.00125	0.015	0.98375	0	0	0	0	3	8.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215955214	15	26143440	G	A	ENSG00000206187	ENST00000383019	r.?	-	-	upstream	23	0	0	35	10	28.57142857	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	1.380149992	1.380149992	1	0	0	1	0	0	0	0	3	1.60E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215955242	15	26306851	T	A	-	-	-	-	-	-	35	0	0	79	24	30.37974684	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	1.467501258	0.733750629	2	0	0.01875	0.98125	0	0	0	0	3	5.20E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215955255	15	26463399	T	A	-	-	-	-	-	-	33	0	0	36	4	11.11111111	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	0.536724997	0.603503571	0.889348503	0.00375	0.0625	0.93375	0	0	0	0	3	3.24E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215955274	15	26621378	C	A	-	-	-	-	-	-	43	0	0	62	14	22.58064516	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	1.090763704	1.090763704	1	0	0	1	0	0	0	0	3	1.42E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215955284	15	26678104	C	A	-	-	-	-	-	-	32	0	0	54	15	27.77777778	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	1.341812493	1.341812493	1	0	0	1	0	0	0	0	3	2.20E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215955462	15	28312862	G	A	OCA2	CCDS10020.1	r.?	-	-	intronic	39	0	0	64	17	26.5625	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.046875	1.046875	1	0	0	1	0	0	0	0	3	8.43E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215955763	15	31317275	G	A	TRPM1	CCDS10024.2	r.?	-	-	intronic	32	0	0	64	15	23.4375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.923713235	0.923713235	1	0	0.00125	0.99875	0	0	0	0	3	3.87E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215955914	15	33084384	G	A	FMN1	CCDS45209.1	r.?	-	-	intronic	30	0	0	45	12	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.00125	0.99875	0	0	0	0	3	6.03E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215956152	15	35745381	T	A	ATPBD4	CCDS10043.1	r.?	-	-	intronic	23	0	0	65	19	29.23076923	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.152036199	1.152036199	1	0	0	1	0	0	0	0	3	1.89E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215956191	15	36167716	G	A	-	-	-	-	-	-	25	0	0	53	10	18.86792453	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.743618202	0.743618202	1	0	0.02875	0.97125	0	0	0	0	3	1.57E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215956501	15	39403968	G	A	-	-	-	-	-	-	31	0	0	66	11	16.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.656862745	0.656862745	1	0.0025	0.0575	0.94	0	0	0	0	3	4.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215956797	15	42941904	C	A	STARD9	ENST00000290607	r.?	-	-	intronic	20	0	0	27	10	37.03703704	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.459694989	1.459694989	1	0	0.00125	0.9975	0.00125	0	0	0	3	7.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215957213	15	46878466	T	A	-	-	-	-	-	-	36	0	0	66	14	21.21212121	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.83600713	0.83600713	1	0	0.01125	0.98875	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215957774	15	51370416	C	A	TNFAIP8L3	CCDS32241.1	r.?	-	-	intronic	35	0	0	37	16	43.24324324	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.704292528	0.852146264	2	0	0.00375	0.99625	0	0	0	0	3	1.78E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215957987	15	53550126	G	A	-	-	-	-	-	-	35	0	0	62	12	19.35483871	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.762808349	0.762808349	1	0	0.005	0.995	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215958121	15	54966829	T	A	-	-	-	-	-	-	31	0	0	57	13	22.80701754	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.898864809	0.898864809	1	0	0.00375	0.99625	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215958538	15	58448465	G	A	AQP9	CCDS10165.1	r.?	-	-	intronic	44	0	0	70	19	27.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.069747899	1.069747899	1	0	0	1	0	0	0	0	3	9.50E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215958761	15	60413026	G	A	-	-	-	-	-	-	22	0	0	64	9	14.0625	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.694852941	0.694852941	1	0.00125	0.04	0.95875	0	0	0	0	3	4.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215959144	15	63014822	G	A	TLN2	CCDS32261.1	r.?	-	-	intronic	39	0	0	56	15	26.78571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.323529412	1.323529412	1	0	0.00125	0.99875	0	0	0	0	3	4.09E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215959229	15	63598007	C	A	APH1B	CCDS10184.1	r.871c>a	c.?	p.?	3'UTR variant	32	0	0	65	13	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	1.57E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215960025	15	69348660	G	A	NOX5	CCDS32276.1	r.?	-	-	intronic	34	0	0	54	15	27.77777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.37254902	1.37254902	1	0	0	1	0	0	0	0	3	2.20E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215960103	15	69895735	G	A	AC100826.2	ENST00000505880	r.?	-	-	intronic	34	0	0	47	12	25.53191489	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.261576971	1.261576971	1	0	0.00125	0.99875	0	0	0	0	3	1.09E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215960667	15	74645031	C	A	CYP11A1	CCDS45303.1	r.?	-	-	intronic	30	0	0	60	14	23.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.152941176	1.152941176	1	0	0.0025	0.9975	0	0	0	0	3	8.54E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215960979	15	78357655	C	A	TBC1D2B	CCDS32301.2	r.?	-	-	intronic	29	0	0	58	17	29.31034483	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.155172414	1.155172414	1	0	0	1	0	0	0	0	3	1.24E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215961081	15	79344759	C	A	RASGRF1	CCDS42065.1	r.?	-	-	intronic	37	0	0	24	10	41.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.642156863	1.642156863	1	0	0.00125	0.99875	0	0	0	0	3	1.80E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215961203	15	80282835	G	A	ENSG00000180725	ENST00000318816	r.589g>a	c.?	p.?	3'UTR variant	36	0	0	53	11	20.75471698	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.817980022	0.817980022	1	0	0.00875	0.99125	0	0	0	0	3	3.07E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215961511	15	84202349	T	A	SH3GL3	CCDS10325.2	r.?	-	-	intronic	35	0	0	58	14	24.13793103	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.951318458	0.951318458	1	0	0	1	0	0	0	0	3	5.04E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215961754	15	86634886	C	A	-	-	-	-	-	-	30	0	0	77	18	23.37662338	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92131398	0.92131398	1	0	0	1	0	0	0	0	3	4.71E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215961809	15	87303917	G	A	-	-	-	-	-	-	28	0	0	39	10	25.64102564	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.010558069	1.010558069	1	0	0.005	0.995	0	0	0	0	3	5.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215961893	15	88248966	C	A	-	-	-	-	-	-	42	0	0	27	7	25.92592593	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.021786492	1.021786492	1	0	0.00875	0.99125	0	0	0	0	3	6.36E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215962268	15	91766725	C	A	SV2B	CCDS10370.1	r.?	-	-	intronic	41	0	0	67	25	37.31343284	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.470588235	0.735294118	2	0	0.02125	0.97875	0	0	0	0	3	4.07E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1215962539	15	94606235	G	A	-	-	-	-	-	-	37	0	0	42	14	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	2.83E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215962855	15	97475041	C	A	-	-	-	-	-	-	40	0	0	81	19	23.45679012	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.924473493	0.924473493	1	0	0	1	0	0	0	0	3	2.15E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215963013	15	98639149	T	A	-	-	-	-	-	-	34	0	0	56	9	16.07142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.633403361	0.633403361	1	0.0025	0.07625	0.92125	0	0	0	0	3	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215963116	15	99302556	G	A	IGF1R	CCDS10378.1	r.?	-	-	intronic	39	0	0	66	15	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0	1	0	0	0	0	3	6.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215963295	15	100819868	C	A	ADAMTS17	CCDS10383.1	r.?	-	-	intronic	25	0	0	24	5	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.005	0.995	0	0	0	0	3	1.23E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215963477	15	101647441	G	A	-	-	-	-	-	-	34	0	0	25	4	16	0	0	NA	0	0	NA							3.206976683	2	1	0.793023317	2	2	0.206976683	unphased	0.663704505	0.663704505	1	0.00375	0.05375	0.9425	0	0	0	0	3	7.27E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215963546	15	102299916	C	A	ENSG00000237157	ENST00000413770	r.?	-	-	downstream	124	0	0	30	5	16.66666667	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.490196078	0.490196078	1	0.02375	0.17625	0.8	0	0	0	0	3	4.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215964051	16	5369793	C	A	-	-	-	-	-	-	43	0	0	65	28	43.07692308	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.899722745	0.899722745	1	0	0	1	0	0	0	0	3	6.12E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1215964400	16	7491822	C	A	ENSG00000078328	CCDS45405.1	r.?	-	-	intronic	31	0	0	31	10	32.25806452	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.673755512	0.673755512	1	0	0.0525	0.9475	0	0	0	0	3	3.94E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215964425	16	7685957	C	A	ENSG00000078328	CCDS45405.1	r.?	-	-	intronic	34	0	0	16	9	56.25	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	1.174861173	1.174861173	1	0	0	1	0	0	0	0	3	2.16E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215964495	16	8096717	G	A	-	-	-	-	-	-	33	0	0	80	40	50	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	1.044321043	1.044321043	1	0	0	1	0	0	0	0	3	8.04E-70	1	1	1	NA	NA	NA
1353824	PD9772b	1215964678	16	9135001	G	A	-	-	-	-	-	-	33	0	0	80	39	48.75	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	1.018213017	1.018213017	1	0	0	1	0	0	0	0	3	1.56E-67	1	1	1	NA	NA	NA
1353824	PD9772b	1215964779	16	9700895	C	A	-	-	-	-	-	-	45	0	0	41	17	41.46341463	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.866022328	0.866022328	1	0	0	1	0	0	0	0	3	1.03E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215964806	16	9871857	G	A	GRIN2A	CCDS10539.1	r.?	-	-	intronic	25	0	0	48	19	39.58333333	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.826754159	0.826754159	1	0	0.005	0.995	0	0	0	0	3	1.92E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215965221	16	12770535	C	A	CPPED1	CCDS42120.1	r.?	-	-	intronic	36	0	0	56	23	41.07142857	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.029411765	1.014705882	2	0	0	1	0	0	0	0	3	3.22E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215965794	16	16970421	G	A	-	-	-	-	-	-	37	0	0	80	30	37.5	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.852941176	0.926470588	2	0	0	1	0	0	0	0	3	6.48E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1215966212	16	19534480	T	A	ENSG00000103540	CCDS10579.1	r.?	-	-	upstream	47	0	0	56	23	41.07142857	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.029411765	1.014705882	2	0	0	1	0	0	0	0	3	3.22E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215966267	16	19971425	T	A	-	-	-	-	-	-	27	0	0	66	28	42.42424242	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.096256684	1.048128342	2	0	0	1	0	0	0	0	3	1.06E-46	1	1	1	NA	NA	NA
1353824	PD9772b	1215966354	16	20525426	G	A	-	-	-	-	-	-	42	0	0	69	14	20.28985507	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.002557545	1.002557545	1	0	0.00125	0.99875	0	0	0	0	3	7.30E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215966505	16	21852965	G	A	ENSG00000185864	ENST00000451409	r.?	-	-	intronic	35	0	0	50	12	24	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.945882353	0.945882353	1	0	0.005	0.995	0	0	0	0	3	2.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215966630	16	22942048	C	A	-	-	-	-	-	-	30	0	0	55	12	21.81818182	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.859893048	0.859893048	1	0	0.00375	0.99625	0	0	0	0	3	8.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215966690	16	23538104	C	A	EARS2	CCDS42132.1	r.?	-	-	intronic	41	0	0	25	9	36	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.418823529	1.418823529	1	0	0.00125	0.99875	0	0	0	0	3	3.71E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215967126	16	27715724	G	A	KIAA0556	CCDS32415.1	r.?	-	-	intronic	36	0	0	50	18	36	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.418823529	1.418823529	1	0	0	1	0	0	0	0	3	5.92E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215967282	16	29579984	G	A	ENSG00000205534	ENST00000447140	r.?	-	-	intronic	35	0	0	96	19	19.79166667	0	0	NA	0	0	NA							1.86601229	1	0	0.13398771	1	1	0.86601229	unphased	0.555589442	0.555589442	1	0.00375	0.54875	0.4475	0	0	0	0	2	7.42E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215967299	16	29700204	C	A	QPRT	CCDS10651.1	r.?	-	-	intronic	41	0	0	28	4	14.28571429	0	0	NA	0	0	NA							1.86601229	1	0	0.13398771	1	1	0.86601229	unphased	0.401026966	0.463073065	0.86601229	0.01875	0.1625	0.81875	0	0	0	0	3	1.16E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215967338	16	29946910	T	A	-	-	-	-	-	-	37	0	0	57	12	21.05263158	0	0	NA	0	0	NA							1.86601229	1	0	0.13398771	1	1	0.86601229	unphased	0.590987108	0.682423465	0.86601229	0	0.04625	0.95375	0	0	0	0	3	1.40E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215973834	16	34399471	C	A	-	-	-	-	-	-	34	0	0	68	13	19.11764706	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.753460208	0.753460208	1	0	0.0125	0.9875	0	0	0	0	3	2.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215975749	16	48712289	C	A	-	-	-	-	-	-	33	0	0	60	11	18.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.72254902	0.72254902	1	0	0.02375	0.97625	0	0	0	0	3	1.34E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215976183	16	53464378	G	A	RBL2	CCDS10748.1	r.?	-	-	upstream	35	0	0	72	18	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215976627	16	58267403	C	A	-	-	-	-	-	-	20	0	0	56	18	32.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.266806723	1.266806723	1	0	0	1	0	0	0	0	3	6.76E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215976908	16	61076544	G	A	-	-	-	-	-	-	37	0	0	64	15	23.4375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.923713235	0.923713235	1	0	0	1	0	0	0	0	3	3.87E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215977129	16	63618136	C	A	-	-	-	-	-	-	28	0	0	59	18	30.50847458	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.202392822	1.202392822	1	0	0	1	0	0	0	0	3	2.03E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215977143	16	63748254	T	A	-	-	-	-	-	-	38	0	0	68	15	22.05882353	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.869377163	0.869377163	1	0	0.00375	0.99625	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215977395	16	66187879	C	A	-	-	-	-	-	-	31	0	0	61	19	31.14754098	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.227579556	1.227579556	1	0	0	1	0	0	0	0	3	4.64E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215977869	16	71048248	G	A	HYDIN2	CCDS42189.1	r.?	-	-	intronic	91	0	0	99	7	7.070707071	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.349376114	0.349376114	1	0.17375	0.70375	0.1225	0	0	0	0	2	7.78E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215977980	16	71662999	G	A	MARVELD3	CCDS10904.1	r.?	-	-	intronic	37	0	0	48	12	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.00125	0.99875	0	0	0	0	3	1.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215978437	16	74799607	G	A	FA2H	CCDS10911.1	r.?	-	-	intronic	34	0	0	35	10	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0.0025	0.9975	0	0	0	0	3	1.60E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215978731	16	77361315	G	A	ADAMTS18	CCDS10926.1	r.?	-	-	intronic	30	0	0	71	17	23.94366197	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.183098592	1.183098592	1	0	0.00125	0.99875	0	0	0	0	3	6.12E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215979184	16	80625976	T	A	-	-	-	-	-	-	34	0	0	78	14	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.01	0.99	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215979259	16	81089469	T	A	C16orf46	CCDS42201.1	r.?	-	-	intronic	24	0	0	46	7	15.2173913	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.751918159	0.751918159	1	0	0.0275	0.9725	0	0	0	0	3	3.53E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215979450	16	82506545	C	A	-	-	-	-	-	-	45	0	0	67	10	14.92537313	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.737489025	0.737489025	1	0	0.03375	0.96625	0	0	0	0	3	1.87E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215979636	16	83726838	C	A	CDH13	ENST00000268613	r.?	-	-	intronic	45	0	0	56	15	26.78571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.323529412	1.323529412	1	0	0	1	0	0	0	0	3	4.09E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215979889	16	86114414	G	A	AC135012.1	ENST00000505352	r.?	-	-	downstream	32	0	0	37	15	40.54054054	0	0	NA	0	0	NA							0.188610277	0	0	0.811389723	1	0	0.188610277	unphased	0.458021655	0.458021655	1	0.03875	0.95	0.01125	0	0	0	0	2	2.58E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215980255	16	88747117	C	A	SNAI3	CCDS32505.1	r.?	-	-	intronic	26	0	0	35	8	22.85714286	0	0	NA	0	0	NA							0.188610277	0	0	0.811389723	1	0	0.188610277	unphased	0.258236971	1.369156414	0.188610277	0	0.005	0.995	0	0	0	0	3	8.15E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215980845	17	2513577	T	A	PAFAH1B1	CCDS32528.1	r.?	-	-	intronic	34	0	0	69	4	5.797101449	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.203848221	0.203848221	1	0.555	0.4375	0.0075	0	0	0	0	1	0.000416985	1	1	1	NA	NA	NA
1353824	PD9772b	1215981331	17	5947671	T	A	-	-	-	-	-	-	28	0	0	40	18	45	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.582371818	1.110596404	1.424794653	0	0	1	0	0	0	0	3	3.90E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215981423	17	6934930	C	A	BCL6B	CCDS42248.1	r.?	-	-	downstream	41	0	0	14	8	57.14285714	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	2.009361038	1.004680519	2	0	0.00375	0.99625	0	0	0	0	3	1.14E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215981499	17	7578263	G	A	TP53	CCDS11118.1	r.776c>u	c.586C>T	p.R196*	nonsense	34	0	0	14	6	42.85714286	10	0	0	12	5	41.66666667							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.507020779	1.507020779	1	0	0.00375	0.995	0.00125	0	0	0	3	4.53E-11	1	2.40E-09	1	NA	NA	NA
1353824	PD9772b	1215981610	17	8670833	T	A	-	-	-	-	-	-	18	0	0	80	37	46.25	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.62632659	1.141446304	1.424794653	0	0	1	0	0	0	0	3	5.08E-63	1	1	1	NA	NA	NA
1353824	PD9772b	1215981851	17	10673301	G	A	-	-	-	-	-	-	49	0	0	44	23	52.27272727	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.838108677	0.919054339	2	0	0	1	0	0	0	0	3	2.17E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1215982433	17	14389048	G	A	-	-	-	-	-	-	32	0	0	45	10	22.22222222	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.781418182	0.781418182	1	0	0.01625	0.98375	0	0	0	0	3	2.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215983319	17	20457978	G	A	-	-	-	-	-	-	62	0	0	56	9	16.07142857	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.565132792	0.982488767	0.575205347	0	0.005	0.995	0	0	0	0	3	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215986273	17	29786083	C	A	RAB11FIP4	CCDS11267.1	r.?	-	-	intronic	28	0	0	58	14	24.13793103	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.951318458	0.951318458	1	0	0.0025	0.9975	0	0	0	0	3	5.04E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215986514	17	32352267	G	A	ACCN1	CCDS42296.1	r.?	-	-	intronic	50	0	0	71	19	26.76056338	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.054681027	1.054681027	1	0	0	1	0	0	0	0	3	1.29E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215986957	17	37024313	G	A	LASP1	CCDS11331.1	r.?	-	-	upstream	23	0	0	60	16	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.00125	0.99875	0	0	0	0	3	1.86E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215987060	17	38583896	C	A	-	-	-	-	-	-	40	0	0	55	14	25.45454545	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.003208556	1.003208556	1	0	0.0025	0.9975	0	0	0	0	3	2.19E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215987750	17	46221697	G	A	SKAP1	CCDS32674.1	r.?	-	-	intronic	29	0	0	48	14	29.16666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.149509804	1.149509804	1	0	0	1	0	0	0	0	3	2.51E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215987785	17	46565766	G	A	-	-	-	-	-	-	24	0	0	35	8	22.85714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.900840336	0.900840336	1	0	0.0075	0.9925	0	0	0	0	3	8.15E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215987921	17	48135501	G	A	ITGA3	CCDS11558.1	r.?	-	-	intronic	39	0	0	39	6	15.38461538	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.606334842	0.606334842	1	0.0025	0.09125	0.90625	0	0	0	0	3	4.43E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215987929	17	48330043	C	A	-	-	-	-	-	-	36	0	0	31	14	45.16129032	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.779886148	0.889943074	2	0	0.0025	0.9975	0	0	0	0	3	1.49E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215988052	17	49541825	G	A	-	-	-	-	-	-	21	0	0	11	3	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0.00375	0.0125	0.98375	0	0	0	0	3	2.00E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215988165	17	50593597	G	A	-	-	-	-	-	-	35	0	0	67	13	19.40298507	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.015	0.985	0	0	0	0	3	2.41E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215988341	17	52113584	T	A	-	-	-	-	-	-	41	0	0	52	18	34.61538462	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.364253394	1.364253394	1	0	0.00125	0.99875	0	0	0	0	3	1.39E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215988342	17	52113585	C	A	-	-	-	-	-	-	41	0	0	53	19	35.8490566	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.412874584	1.412874584	1	0	0	1	0	0	0	0	3	1.93E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215989175	17	60733747	C	A	MRC2	CCDS11634.1	r.?	-	-	intronic	32	0	0	30	8	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.005	0.99375	0.00125	0	0	0	3	2.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215989857	17	66790271	G	A	-	-	-	-	-	-	27	0	0	55	21	38.18181818	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.886631016	0.943315508	2	0	0.00125	0.99875	0	0	0	0	3	3.41E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215990695	17	71822231	T	A	C17orf54	ENST00000444747	r.?	-	-	upstream	30	0	0	49	10	20.40816327	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.396158463	0.396158463	1	0.11375	0.8575	0.02875	0	0	0	0	2	6.72E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215990772	17	72323357	T	A	KIF19	CCDS32718.2	r.?	-	-	intronic	32	0	0	37	6	16.21621622	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.314785374	0.314785374	1	0.24625	0.73	0.02375	0	0	0	0	2	3.18E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215990775	17	72360183	C	A	BTBD17	CCDS32719.1	r.?	-	-	upstream	35	0	0	40	7	17.5	238	0	0	27	6	22.22222222							1	1	0	1	NA	NA	NA	unphased	0.339705882	0.339705882	1	0.1775	0.79625	0.02625	0	0	0	0	2	1.26E-09	1	4.23E-09	1	NA	NA	NA
1353824	PD9772b	1215990898	17	73164398	G	A	SUMO2	CCDS45774.1	r.493c>u	c.?	p.?	3'UTR variant	26	0	0	69	11	15.94202899	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.309462916	0.309462916	1	0.36375	0.63625	0	0	0	0	0	2	6.82E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215990953	17	73412112	G	A	-	-	-	-	-	-	19	0	0	57	7	12.28070175	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.238390093	0.238390093	1	0.61375	0.385	0.00125	0	0	0	0	1	1.66E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215991155	17	75267945	C	A	-	-	-	-	-	-	35	0	0	16	4	25	0	0	NA	0	0	NA							0.675223744	0	0	0.324776256	1	0	0.675223744	unphased	0.404100054	0.59846837	0.675223744	0.005	0.06375	0.93125	0	0	0	0	3	1.08E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215991213	17	75957945	C	A	-	-	-	-	-	-	29	0	0	82	13	15.85365854	0	0	NA	0	0	NA							0.675223744	0	0	0.324776256	1	0	0.675223744	unphased	0.256258571	0.256258571	1	0.79875	0.20125	0	0	0	0	0	1	3.95E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215991454	17	78945458	G	A	-	-	-	-	-	-	29	0	0	9	6	66.66666667	0	0	NA	0	0	NA							0.675223744	0	0	0.324776256	1	0	0.675223744	unphased	1.077600143	1.077600143	1	0	0.00375	0.99625	0	0	0	0	3	1.30E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215992010	18	1452721	T	A	-	-	-	-	-	-	37	0	0	71	18	25.35211268	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.506213753	0.753106877	2	0	0.01375	0.98625	0	0	0	0	3	9.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215992523	18	4038380	G	A	-	-	-	-	-	-	34	0	0	80	10	12.5	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.742647059	0.742647059	1	0	0.015	0.985	0	0	0	0	3	1.17E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215992536	18	4105759	G	A	-	-	-	-	-	-	36	0	0	28	12	42.85714286	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.546218487	0.848739496	3	0	0.005	0.995	0	0	0	0	3	6.90E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215992604	18	4485006	C	A	-	-	-	-	-	-	45	0	0	71	12	16.90140845	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.004142502	1.004142502	1	0	0.00125	0.99875	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215992896	18	6614000	T	A	-	-	-	-	-	-	33	0	0	69	14	20.28985507	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.002557545	1.002557545	1	0	0	1	0	0	0	0	3	7.30E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215992956	18	7050854	C	A	LAMA1	CCDS32787.1	r.521g>u	c.427G>T	p.G143C	missense	25	0	0	76	19	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	5.56E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215993068	18	7900896	C	A	PTPRM	CCDS11840.1	r.?	-	-	intronic	42	0	0	77	21	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	1.46E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215993093	18	8277483	G	A	PTPRM	CCDS11840.1	r.?	-	-	intronic	45	0	0	53	17	32.0754717	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.264150943	1.264150943	1	0	0	1	0	0	0	0	3	2.08E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215993108	18	8433545	C	A	-	-	-	-	-	-	35	0	0	4	3	75	147	0	0	49	8	16.32653061							4	2	2	1	NA	NA	NA	unphased	3.705882353	1.852941176	2	0.00125	0.005	0.99375	0	0	0	0	3	4.98E-07	1	1.47E-10	1	YES	somatic	1_1
1353824	PD9772b	1215993334	18	10109477	T	A	-	-	-	-	-	-	37	0	0	80	18	22.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.111764706	1.111764706	1	0	0	1	0	0	0	0	3	1.01E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215993520	18	11817528	G	A	GNAL	CCDS11851.1	r.?	-	-	intronic	39	0	0	66	10	15.15151515	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.748663102	0.748663102	1	0	0.02375	0.97625	0	0	0	0	3	1.60E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215993613	18	12327244	G	A	AFG3L2	CCDS11859.1	r.?	-	-	downstream	37	1	2.702702703	18	6	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	1.647058824	1	0	0.0025	0.9975	0	0	0	0	3	2.75E-10	0.169281299	1	1	NA	NA	NA
1353824	PD9772b	1215993690	18	13021303	G	A	CEP192	CCDS32792.1	r.?	-	-	intronic	39	0	0	89	16	17.97752809	0	0	NA	1	1	100							4	2	2	1	NA	NA	NA	unphased	0.888301388	0.888301388	1	0	0.00125	0.99875	0	0	0	0	3	1.91E-20	1	0.005	1	NA	NA	NA
1353824	PD9772b	1215996117	18	21135250	T	A	NPC1	CCDS11878.1	r.?	-	-	intronic	27	0	0	65	28	43.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.128506787	1.064253394	2	0	0	1	0	0	0	0	3	6.12E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1215996328	18	22590725	T	A	-	-	-	-	-	-	36	0	0	87	22	25.28735632	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.249492901	1.249492901	1	0	0	1	0	0	0	0	3	3.97E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215996405	18	23042266	T	A	-	-	-	-	-	-	34	0	0	90	14	15.55555556	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.924183007	0.924183007	1	0	0.00125	0.99875	0	0	0	0	3	3.87E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215996685	18	24637860	C	A	CHST9	CCDS42422.1	r.?	-	-	intronic	26	0	0	51	11	21.56862745	2	0	0	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.281430219	1.281430219	1	0	0	1	0	0	0	0	3	1.94E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215996942	18	26326258	G	A	-	-	-	-	-	-	39	0	0	92	11	11.95652174	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.710358056	0.710358056	1	0	0.0375	0.9625	0	0	0	0	3	1.81E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215997096	18	27200556	T	A	-	-	-	-	-	-	41	0	0	80	7	8.75	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.519852941	0.519852941	1	0.0125	0.1725	0.815	0	0	0	0	3	1.80E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215997346	18	28545561	C	A	-	-	-	-	-	-	40	0	0	111	24	21.62162162	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.284578696	1.284578696	1	0	0	1	0	0	0	0	3	5.29E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215997377	18	28751076	G	A	-	-	-	-	-	-	28	0	0	87	14	16.09195402	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.956051386	0.956051386	1	0	0.0025	0.9975	0	0	0	0	3	2.35E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215997403	18	28879576	G	A	-	-	-	-	-	-	35	0	0	105	7	6.666666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.396078431	0.396078431	1	0.0875	0.57	0.3425	0	0	0	0	2	1.16E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215997457	18	29240955	G	A	B4GALT6	CCDS11900.1	r.?	-	-	intronic	42	0	0	106	16	15.09433962	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.896781354	0.896781354	1	0	0	1	0	0	0	0	3	3.68E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215997483	18	29368734	C	A	-	-	-	-	-	-	23	0	0	110	19	17.27272727	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.026203209	1.026203209	1	0	0.0025	0.9975	0	0	0	0	3	1.19E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215998513	18	36168151	G	A	-	-	-	-	-	-	37	0	0	83	13	15.6626506	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.930545712	0.930545712	1	0	0.00375	0.99625	0	0	0	0	3	4.66E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215998532	18	36261224	G	A	-	-	-	-	-	-	29	0	0	58	10	17.24137931	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.024340771	1.024340771	1	0	0	1	0	0	0	0	3	4.10E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215998557	18	36372242	G	A	-	-	-	-	-	-	36	0	0	92	15	16.30434783	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.968670077	0.968670077	1	0	0.00375	0.99625	0	0	0	0	3	1.39E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215998590	18	36584794	C	A	-	-	-	-	-	-	27	0	0	94	5	5.319148936	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.316020025	0.316020025	1	0.16125	0.60375	0.235	0	0	0	0	2	0.000118532	1	1	1	NA	NA	NA
1353824	PD9772b	1215999216	18	40334035	T	A	RIT2	CCDS11921.1	r.?	-	-	intronic	27	0	0	72	13	18.05555556	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.072712418	1.072712418	1	0	0	1	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215999643	18	42893197	G	A	-	-	-	-	-	-	38	0	0	55	10	18.18181818	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.080213904	1.080213904	1	0	0.00125	0.99875	0	0	0	0	3	2.33E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215999695	18	43223810	T	A	SLC14A2	CCDS11924.1	r.?	-	-	intronic	30	0	0	30	6	20	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.188235294	1.188235294	1	0	0.00125	0.99875	0	0	0	0	3	8.37E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216000066	18	45462748	C	A	-	-	-	-	-	-	40	0	0	93	11	11.82795699	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.702719798	0.702719798	1	0.00125	0.0325	0.96625	0	0	0	0	3	2.04E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216000321	18	47057787	C	A	-	-	-	-	-	-	33	0	0	74	31	41.89189189	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.488871224	0.829623741	3	0	0.00125	0.99875	0	0	0	0	3	2.52E-51	1	1	1	NA	NA	NA
1353824	PD9772b	1216000322	18	47057788	C	A	-	-	-	-	-	-	34	0	0	71	32	45.07042254	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.677713339	0.892571113	3	0	0.00125	0.99875	0	0	0	0	3	3.05E-54	1	1	1	NA	NA	NA
1353824	PD9772b	1216000624	18	48857606	G	A	-	-	-	-	-	-	40	0	0	92	21	22.82608696	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.356138107	1.356138107	1	0	0	1	0	0	0	0	3	9.72E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216000685	18	49287961	C	A	-	-	-	-	-	-	34	0	0	93	17	18.27956989	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.086021505	1.086021505	1	0	0	1	0	0	0	0	3	9.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216000758	18	49802849	C	A	-	-	-	-	-	-	37	0	0	80	16	20	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.188235294	1.188235294	1	0	0	1	0	0	0	0	3	3.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216000861	18	50300011	G	A	DCC	CCDS11952.1	r.?	-	-	intronic	28	0	0	80	36	45	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.673529412	0.891176471	3	0	0	1	0	0	0	0	3	8.50E-61	1	1	1	NA	NA	NA
1353824	PD9772b	1216000983	18	50921731	G	A	DCC	CCDS11952.1	r.?	-	-	intronic	35	0	0	70	27	38.57142857	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.291596639	1.145798319	2	0	0	1	0	0	0	0	3	1.10E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1216001090	18	51463728	C	A	-	-	-	-	-	-	46	0	0	113	38	33.62831858	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.997917751	0.998958876	2	0	0	1	0	0	0	0	3	4.34E-58	1	1	1	NA	NA	NA
1353824	PD9772b	1216001313	18	53028819	C	A	TCF4	CCDS42438.1	r.?	-	-	intronic	32	0	0	92	17	18.47826087	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.097826087	1.097826087	1	0	0.00125	0.99875	0	0	0	0	3	7.54E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216001351	18	53287373	C	A	TCF4	ENST00000398339	r.?	-	-	intronic	34	0	0	100	14	14	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.831764706	0.831764706	1	0	0.00875	0.99125	0	0	0	0	3	1.80E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216001437	18	53814894	G	A	ENSG00000206129	ENST00000382897	r.?	-	-	intronic	28	0	0	68	16	23.52941176	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0	1	0	0	0	0	3	1.75E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216001442	18	53867022	C	A	-	-	-	-	-	-	41	0	0	68	12	17.64705882	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.005	0.995	0	0	0	0	3	1.37E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216001457	18	54008552	C	A	-	-	-	-	-	-	38	0	0	87	33	37.93103448	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.874239351	0.937119675	2	0	0	1	0	0	0	0	3	9.41E-53	1	1	1	NA	NA	NA
1353824	PD9772b	1216001709	18	55806537	G	A	NEDD4L	CCDS45872.1	r.?	-	-	intronic	23	0	0	33	8	24.24242424	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.197860963	1.197860963	1	0	0.00375	0.99625	0	0	0	0	3	4.85E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216001906	18	57289512	C	A	CCBE1	CCDS32838.1	r.?	-	-	intronic	42	0	0	42	6	14.28571429	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.045	0.95375	0	0	0	0	3	7.02E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216002615	18	61987468	G	A	-	-	-	-	-	-	43	0	0	75	11	14.66666667	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.724705882	0.724705882	1	0	0.0325	0.9675	0	0	0	0	3	1.78E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216002991	18	64121030	G	A	-	-	-	-	-	-	44	0	0	96	18	18.75	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.113970588	1.113970588	1	0	0	1	0	0	0	0	3	3.60E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216003056	18	64443935	G	A	-	-	-	-	-	-	37	0	0	72	34	47.22222222	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.805555556	0.935185185	3	0	0	1	0	0	0	0	3	1.92E-58	1	1	1	NA	NA	NA
1353824	PD9772b	1216003064	18	64481125	C	A	-	-	-	-	-	-	34	0	0	87	17	19.54022989	2	0	0	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.16091954	1.16091954	1	0	0	1	0	0	0	0	3	2.71E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216003406	18	65986621	G	A	-	-	-	-	-	-	29	0	0	77	11	14.28571429	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.848739496	0.848739496	1	0	0.01125	0.98875	0	0	0	0	3	2.41E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216003535	18	66713573	T	A	CCDC102B	CCDS11996.2	r.?	-	-	intronic	40	0	0	80	22	27.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.358823529	1.358823529	1	0	0	1	0	0	0	0	3	4.89E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216003556	18	66832695	T	A	-	-	-	-	-	-	36	0	0	75	17	22.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.12	1.12	1	0	0.00125	0.99875	0	0	0	0	3	1.72E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216003813	18	68567149	T	A	-	-	-	-	-	-	45	0	0	65	16	24.61538462	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.216289593	1.216289593	1	0	0	1	0	0	0	0	3	7.85E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216003820	18	68603341	G	A	-	-	-	-	-	-	34	0	0	70	18	25.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.270588235	1.270588235	1	0	0.00125	0.99875	0	0	0	0	3	6.91E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216003841	18	68775873	T	A	-	-	-	-	-	-	54	0	0	82	19	23.17073171	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.144906743	1.144906743	1	0	0	1	0	0	0	0	3	2.79E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216003931	18	69354950	G	A	-	-	-	-	-	-	21	0	0	88	13	14.77272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.729946524	0.729946524	1	0	0.0225	0.9775	0	0	0	0	3	1.03E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216004290	18	71725929	G	A	-	-	-	-	-	-	35	0	0	75	19	25.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.251764706	1.251764706	1	0	0	1	0	0	0	0	3	4.19E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216004511	18	73773757	T	A	-	-	-	-	-	-	36	0	0	83	4	4.819277108	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.238128987	0.238128987	1	0.40125	0.525	0.07375	0	0	0	0	2	0.000838577	1	1	1	NA	NA	NA
1353824	PD9772b	1216004553	18	74270844	C	A	AC034110.2	ENST00000501504	r.1303c>a	-	-	non-coding variant	36	0	0	42	13	30.95238095	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.529411765	1.529411765	1	0	0.0025	0.99625	0	0	0.00125	0	3	2.72E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216004720	18	75274958	C	A	-	-	-	-	-	-	42	0	0	72	15	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.00125	0.99875	0	0	0	0	3	2.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216004807	18	76076487	C	A	-	-	-	-	-	-	44	0	0	84	16	19.04761905	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.00375	0.99625	0	0	0	0	3	7.07E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216005289	19	452604	C	A	SHC2	CCDS45891.1	r.?	-	-	intronic	48	0	0	26	4	15.38461538	0	0	NA	0	0	NA							0.188898729	0	0	0.811101271	1	0	0.188898729	unphased	0.173857723	0.920375294	0.188898729	0.00125	0.0175	0.98125	0	0	0	0	3	8.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216005323	19	1364913	T	A	MUM1	CCDS12062.1	r.?	-	-	intronic	43	0	0	26	4	15.38461538	0	0	NA	0	0	NA							0.188898729	0	0	0.811101271	1	0	0.188898729	unphased	0.173857723	0.920375294	0.188898729	0.00125	0.01875	0.98	0	0	0	0	3	8.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216005666	19	6010881	G	A	RFX2	CCDS12157.1	r.?	-	-	intronic	30	0	0	25	7	28	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.803624326	0.865125763	0.928910409	0.00125	0.0125	0.98625	0	0	0	0	3	3.47E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216006432	19	12185099	C	A	ZNF844	CCDS45985.1	r.?	-	-	intronic	42	0	0	79	17	21.51898734	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.617613632	0.664879655	0.928910409	0	0.06	0.94	0	0	0	0	3	4.55E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216006628	19	13672924	C	A	-	-	-	-	-	-	32	0	0	35	6	17.14285714	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.492014894	0.529668835	0.928910409	0.005	0.165	0.83	0	0	0	0	3	2.24E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216006777	19	15076473	C	A	SLC1A6	CCDS12321.1	r.?	-	-	intronic	23	0	0	57	10	17.54385965	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.503524014	0.503524014	1	0.015	0.45125	0.53375	0	0	0	0	3	3.40E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216006866	19	15598967	T	A	-	-	-	-	-	-	27	0	0	31	5	16.12903226	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.462917239	0.498344334	0.928910409	0.015	0.19125	0.79375	0	0	0	0	3	4.76E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216006997	19	16264984	C	A	HSH2D	ENST00000397372	r.?	-	-	intronic	23	0	0	19	4	21.05263158	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.604228817	0.650470499	0.928910409	0.00875	0.0425	0.94875	0	0	0	0	3	2.28E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216007049	19	16787033	G	A	TMEM38A	CCDS12349.1	r.?	-	-	intronic	19	0	0	14	4	28.57142857	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.820024823	0.820024823	1	0	0.02375	0.97625	0	0	0	0	3	6.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216007122	19	17448282	G	A	ANO8	CCDS32949.1	r.?	-	-	upstream	35	0	0	23	5	21.73913043	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.62393193	0.671681493	0.928910409	0.00375	0.04	0.95625	0	0	0	0	3	9.75E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216007381	19	20183840	G	A	ZNF90	CCDS46028.1	r.?	-	-	upstream	34	0	0	45	8	17.77777778	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.510237667	0.549286199	0.928910409	0.0075	0.1775	0.815	0	0	0	0	3	7.14E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216007697	19	22078265	C	A	-	-	-	-	-	-	38	0	0	86	19	22.09302326	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.634088962	0.682615843	0.928910409	0	0.05375	0.94625	0	0	0	0	3	7.57E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216007944	19	23281851	T	A	-	-	-	-	-	-	34	0	0	62	12	19.35483871	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.569259962	0.569259962	1	0.00125	0.25	0.74875	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216007983	19	23620046	C	A	ENSG00000235694	ENST00000439808	r.?	-	-	intronic	36	0	0	67	10	14.92537313	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.438981563	0.438981563	1	0.0525	0.775	0.1725	0	0	0	0	2	1.87E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216007997	19	23740612	G	A	-	-	-	-	-	-	31	0	0	39	12	30.76923077	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.904977376	0.904977376	1	0	0.0025	0.9975	0	0	0	0	3	8.43E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216008960	19	28315089	G	A	-	-	-	-	-	-	42	0	0	62	16	25.80645161	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.759013283	0.759013283	1	0	0.01625	0.98375	0	0	0	0	3	3.36E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216009073	19	29219282	G	A	AC005307.1	ENST00000511462	r.?	-	-	upstream	30	0	0	35	9	25.71428571	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.756302521	0.756302521	1	0	0.0175	0.9825	0	0	0	0	3	1.23E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216009418	19	31896918	G	A	ENSG00000232700	ENST00000441786	r.?	-	-	intronic	30	0	0	60	12	20	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.588235294	0.588235294	1	0.00375	0.1675	0.82875	0	0	0	0	3	2.74E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216009613	19	33374453	C	A	CCDC123	CCDS32987.1	r.?	-	-	intronic	33	0	0	47	11	23.40425532	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.688360451	0.688360451	1	0	0.03375	0.96625	0	0	0	0	3	7.21E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216009697	19	34136075	C	A	CHST8	CCDS12433.1	r.?	-	-	intronic	23	0	0	24	7	29.16666667	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.857843137	0.857843137	1	0	0.0175	0.9825	0	0	0	0	3	2.51E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216009742	19	34524867	G	A	RPS4XP21	ENST00000334591	r.?	-	-	intronic	28	0	0	49	7	14.28571429	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.420168067	0.420168067	1	0.07125	0.5475	0.38125	0	0	0	0	2	5.58E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216009828	19	35257041	G	A	ZNF599	CCDS32991.1	r.?	-	-	intronic	36	0	0	95	17	17.89473684	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.526315789	0.526315789	1	0.00875	0.6925	0.29875	0	0	0	0	2	1.35E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216009876	19	35713566	G	A	FAM187B	CCDS12448.1	r.?	-	-	downstream	40	0	0	43	5	11.62790698	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.341997264	0.341997264	1	0.14	0.6425	0.2175	0	0	0	0	2	2.57E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216009974	19	36486833	G	A	SDHAF1	CCDS32999.1	r.733g>a	c.?	p.?	3'UTR variant	34	0	0	28	5	17.85714286	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.525210084	0.525210084	1	0.00625	0.11125	0.8825	0	0	0	0	3	2.79E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216010415	19	39256405	C	A	-	-	-	-	-	-	29	0	0	24	6	25	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.735294118	0.735294118	1	0	0.035	0.965	0	0	0	0	3	1.95E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216010430	19	39348002	G	A	-	-	-	-	-	-	23	0	0	22	6	27.27272727	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.802139037	0.802139037	1	0	0.02	0.98	0	0	0	0	3	1.09E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216010436	19	39396949	T	A	NFKBIB	CCDS42566.1	r.?	-	-	intronic	32	0	0	27	5	18.51851852	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.544662309	0.544662309	1	0.00625	0.10875	0.885	0	0	0	0	3	2.30E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216010774	19	41832967	C	A	CCDC97	CCDS12578.1	r.?	-	-	downstream	27	0	0	23	6	26.08695652	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.767263427	0.767263427	1	0.00125	0.02375	0.975	0	0	0	0	3	1.47E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216010792	19	42038036	T	A	CEACAM21	ENST00000407170	r.?	-	-	upstream	35	0	0	62	13	20.96774194	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.616698292	0.616698292	1	0.00125	0.12875	0.87	0	0	0	0	3	8.08E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216010810	19	42195522	C	A	CEACAM7	CCDS12583.1	r.?	-	-	upstream	40	0	0	32	10	31.25	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.919117647	0.919117647	1	0	0.005	0.995	0	0	0	0	3	5.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216010876	19	43046283	C	A	-	-	-	-	-	-	36	0	0	7	3	42.85714286	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	1.260504202	1.260504202	1	0	0.0175	0.9825	0	0	0	0	3	4.31E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216010910	19	43377810	C	A	PSG1	CCDS12612.1	r.?	-	-	intronic	44	0	0	70	20	28.57142857	318	0	0	204	35	17.15686275							2	1	1	1	NA	NA	NA	unphased	0.840336134	0.840336134	1	0	0.0025	0.9975	0	0	0	0	3	1.22E-29	1	3.84E-42	1	YES	somatic	1_1
1353824	PD9772b	1216010968	19	43727829	T	A	PSG9	ENST00000433626	r.?	-	-	intronic	21	0	0	44	16	36.36363636	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	1.069518717	1.069518717	1	0	0	1	0	0	0	0	3	5.57E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216011031	19	44125008	C	A	CADM4	CCDS12627.1	r.?	-	-	downstream	27	0	0	29	8	27.5862069	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.811359026	0.811359026	1	0	0.01	0.99	0	0	0	0	3	1.53E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216011405	19	46647149	G	A	IGFL2	CCDS46122.1	r.?	-	-	upstream	37	0	0	67	15	22.3880597	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.658472344	0.658472344	1	0	0.0875	0.9125	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216011423	19	46727469	T	A	-	-	-	-	-	-	35	0	0	55	8	14.54545455	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.427807487	0.427807487	1	0.0675	0.6425	0.29	0	0	0	0	2	3.86E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216011688	19	48803364	G	A	CCDC114	CCDS12714.2	r.?	-	-	intronic	31	0	0	30	5	16.66666667	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.490196078	0.490196078	1	0.01625	0.1725	0.81125	0	0	0	0	3	4.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216012341	19	53614183	C	A	ZNF28	CCDS33093.1	r.?	-	-	intronic	36	0	0	90	20	22.22222222	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.77935704	0.77935704	1	0	0.0075	0.9925	0	0	0	0	3	3.48E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216012656	19	55011186	T	A	LAIR2	CCDS12897.1	r.?	-	-	upstream	37	0	0	46	8	17.39130435	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.609931597	1.07775055	0.565930212	0	0.00625	0.99375	0	0	0	0	3	8.61E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216013050	19	56323167	C	A	NLRP11	CCDS12935.1	r.?	-	-	intronic	56	0	0	66	28	42.42424242	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	1.487863441	0.950146711	1.565930212	0	0	1	0	0	0	0	3	1.06E-46	1	1	1	NA	NA	NA
1353824	PD9772b	1216013193	19	57106430	C	A	ZNF71	CCDS12947.1	r.?	-	-	upstream	21	0	0	19	9	47.36842105	2	0	0	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	1.66126106	1.66126106	1	0	0	0.99875	0.00125	0	0	0	3	1.72E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216013225	19	57244973	G	A	-	-	-	-	-	-	36	0	0	69	13	18.84057971	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.66075923	1.167563096	0.565930212	0	0.00125	0.99875	0	0	0	0	3	3.64E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216013401	19	57975998	G	A	ZNF772	CCDS33133.1	r.?	-	-	downstream	41	0	0	104	17	16.34615385	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.573277054	1.012981887	0.565930212	0	0	1	0	0	0	0	3	6.94E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216013558	19	58826411	C	A	-	-	-	-	-	-	23	0	0	85	28	32.94117647	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	1.155282201	1.155282201	1	0	0	1	0	0	0	0	3	6.45E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1216013751	2	1029324	G	A	SNTG2	CCDS46220.1	r.?	-	-	intronic	43	0	0	76	13	17.10526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.845201238	0.845201238	1	0	0.00625	0.99375	0	0	0	0	3	1.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216013913	2	2014326	G	A	MYT1L	CCDS46222.1	r.?	-	-	intronic	34	0	0	62	11	17.74193548	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.876660342	0.876660342	1	0	0.005	0.995	0	0	0	0	3	1.96E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216013969	2	2448186	T	A	-	-	-	-	-	-	42	0	0	56	11	19.64285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.970588235	0.970588235	1	0	0	1	0	0	0	0	3	5.91E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216013982	2	2601935	C	A	-	-	-	-	-	-	36	0	0	59	13	22.03389831	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.088733799	1.088733799	1	0	0	1	0	0	0	0	3	3.99E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216014195	2	4437581	C	A	-	-	-	-	-	-	37	0	0	68	12	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.00625	0.99375	0	0	0	0	3	1.37E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216014285	2	5234458	T	A	-	-	-	-	-	-	35	0	0	56	14	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	2.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216014441	2	6123838	G	A	-	-	-	-	-	-	39	0	0	57	9	15.78947368	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.780185759	0.780185759	1	0	0.01375	0.98625	0	0	0	0	3	1.42E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216014547	2	7176279	G	A	RNF144A	CCDS1657.1	r.?	-	-	intronic	28	0	0	35	13	37.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.835294118	0.917647059	2	0	0.00125	0.99875	0	0	0	0	3	1.63E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216014934	2	10180185	T	A	KLF11	CCDS1668.1	r.?	-	-	upstream	29	0	0	16	3	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0.00125	0.01875	0.98	0	0	0	0	3	6.67E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216015579	2	14999041	G	A	-	-	-	-	-	-	37	0	0	65	8	12.30769231	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.608144796	0.608144796	1	0	0.06875	0.93125	0	0	0	0	3	1.53E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216015699	2	15903641	G	A	-	-	-	-	-	-	28	0	0	16	5	31.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.544117647	1.544117647	1	0	0.00375	0.99625	0	0	0	0	3	1.30E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216015761	2	16538300	G	A	-	-	-	-	-	-	41	0	0	91	18	19.78021978	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.977375566	0.977375566	1	0	0.00125	0.99875	0	0	0	0	3	1.27E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216015810	2	16995930	G	A	-	-	-	-	-	-	35	0	0	72	14	19.44444444	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.960784314	0.960784314	1	0	0.0075	0.9925	0	0	0	0	3	1.39E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216016065	2	19151950	G	A	-	-	-	-	-	-	33	0	0	68	11	16.17647059	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.799307958	0.799307958	1	0	0.01	0.99	0	0	0	0	3	5.76E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216016098	2	19380646	T	A	-	-	-	-	-	-	35	0	0	78	17	21.79487179	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.076923077	1.076923077	1	0	0	1	0	0	0	0	3	3.59E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216016217	2	20455108	G	A	PUM2	CCDS1698.1	r.2646-6c>u	c.2623-6C>T	p.?	splice region	38	0	0	63	11	17.46031746	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.862745098	0.862745098	1	0	0.00625	0.99375	0	0	0	0	3	2.37E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216016303	2	21277867	G	A	-	-	-	-	-	-	38	0	0	43	8	18.60465116	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.919288646	0.919288646	1	0	0.01125	0.98875	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216016572	2	23765416	G	A	KLHL29	ENST00000486442	r.?	-	-	intronic	45	0	0	50	13	26	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.284705882	1.284705882	1	0	0.00125	0.99875	0	0	0	0	3	3.65E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216016880	2	26432359	G	A	HADHA	CCDS1721.1	r.?	-	-	intronic	33	0	0	95	24	25.26315789	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.248297214	1.248297214	1	0	0.00125	0.99875	0	0	0	0	3	8.29E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216017421	2	30351476	C	A	-	-	-	-	-	-	39	0	0	74	13	17.56756757	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.868044515	0.868044515	1	0	0.005	0.995	0	0	0	0	3	9.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216017464	2	30584677	G	A	-	-	-	-	-	-	29	0	0	49	12	24.48979592	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.210084034	1.210084034	1	0	0.00125	0.99875	0	0	0	0	3	1.90E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216017581	2	31818523	C	A	-	-	-	-	-	-	34	0	0	80	16	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	3.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216017678	2	32565826	C	A	-	-	-	-	-	-	30	0	0	58	14	24.13793103	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.192697769	1.192697769	1	0	0.00125	0.99875	0	0	0	0	3	5.04E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216017801	2	33598479	G	A	LTBP1	CCDS33177.1	r.?	-	-	intronic	34	0	0	58	15	25.86206897	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.277890467	1.277890467	1	0	0.00125	0.99875	0	0	0	0	3	7.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216018145	2	36276007	G	A	-	-	-	-	-	-	36	0	0	83	14	16.86746988	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.833451453	0.833451453	1	0	0.00625	0.99375	0	0	0	0	3	1.17E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216018351	2	37839725	C	A	-	-	-	-	-	-	32	0	0	78	14	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.00875	0.99125	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216018631	2	39335906	C	A	SOS1	CCDS1802.1	r.?	-	-	intronic	30	0	0	80	14	17.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.864705882	0.864705882	1	0	0.00375	0.99625	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216018771	2	40498544	C	A	SLC8A1	CCDS1806.1	r.?	-	-	intronic	35	0	0	62	9	14.51612903	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.717267552	0.717267552	1	0	0.0325	0.9675	0	0	0	0	3	3.12E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216018778	2	40540011	T	A	SLC8A1	CCDS1806.1	r.?	-	-	intronic	36	0	0	89	21	23.59550562	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.165895572	1.165895572	1	0	0	1	0	0	0	0	3	4.49E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216018845	2	41060351	C	A	-	-	-	-	-	-	26	0	0	63	22	34.92063492	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.725490196	0.862745098	2	0	0.00125	0.99875	0	0	0	0	3	1.03E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216018953	2	41907444	C	A	-	-	-	-	-	-	34	0	0	71	12	16.90140845	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.835128418	0.835128418	1	0	0.00375	0.99625	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216019122	2	43120733	G	A	-	-	-	-	-	-	21	0	0	71	12	16.90140845	0	0	NA	0	0	NA							2.646010347	1	1	0.353989653	2	1	0.646010347	unphased	0.606285096	0.938506788	0.646010347	0	0.00375	0.99625	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216019401	2	45095491	G	A	-	-	-	-	-	-	34	0	0	95	21	22.10526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.092260062	1.092260062	1	0	0.00125	0.99875	0	0	0	0	3	2.05E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216019827	2	48622723	T	A	-	-	-	-	-	-	36	0	0	52	9	17.30769231	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.85520362	0.85520362	1	0	0.01	0.99	0	0	0	0	3	5.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216020016	2	50396345	G	A	NRXN1	CCDS46282.1	r.?	-	-	intronic	40	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0	1	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216020260	2	52476711	T	A	-	-	-	-	-	-	38	0	0	74	15	20.27027027	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.001589825	1.001589825	1	0	0.00125	0.99875	0	0	0	0	3	4.22E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216020262	2	52496712	G	A	-	-	-	-	-	-	37	0	0	67	12	17.91044776	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.884986831	0.884986831	1	0	0.00625	0.99375	0	0	0	0	3	1.14E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216020372	2	53402452	C	A	-	-	-	-	-	-	41	0	0	79	12	15.18987342	277	0	0	156	38	24.35897436							4	2	2	1	NA	NA	NA	unphased	0.750558451	0.750558451	1	0	0.0175	0.9825	0	0	0	0	3	9.17E-15	1	6.23E-52	1	YES	somatic	1_1
1353824	PD9772b	1216020423	2	53830080	C	A	ASB3	ENST00000406053	r.?	-	-	intronic	40	0	0	56	14	25	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	2.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216020564	2	54918081	C	A	-	-	-	-	-	-	36	0	0	53	8	15.09433962	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.745837958	0.745837958	1	0.00125	0.02625	0.9725	0	0	0	0	3	2.83E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216020743	2	56133692	G	A	EFEMP1	CCDS1857.1	r.?	-	-	intronic	40	0	0	60	15	25	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216020818	2	57050619	G	A	-	-	-	-	-	-	26	0	0	62	12	19.35483871	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.956356736	0.956356736	1	0	0.0025	0.9975	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216020939	2	57969503	C	A	-	-	-	-	-	-	32	0	0	88	13	14.77272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.729946524	0.729946524	1	0.00125	0.02375	0.975	0	0	0	0	3	1.03E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216021158	2	59729375	T	A	-	-	-	-	-	-	41	0	0	91	7	7.692307692	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.380090498	0.380090498	1	0.135	0.60125	0.26375	0	0	0	0	2	4.38E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216021345	2	61094376	G	A	-	-	-	-	-	-	33	0	0	88	18	20.45454545	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.010695187	1.010695187	1	0	0.00125	0.99875	0	0	0	0	3	6.62E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216021400	2	61415586	C	A	USP34	CCDS42686.1	r.10369g>u	c.10292G>T	p.R3431M	missense	45	0	0	86	20	23.25581395	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.149110807	1.149110807	1	0	0	1	0	0	0	0	3	1.27E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216021924	2	65372397	G	A	-	-	-	-	-	-	32	0	0	33	7	21.21212121	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.048128342	1.048128342	1	0	0.00625	0.99375	0	0	0	0	3	2.98E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216022033	2	66142490	T	A	-	-	-	-	-	-	36	0	0	88	15	17.04545455	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.842245989	0.842245989	1	0	0.005	0.995	0	0	0	0	3	6.87E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216022096	2	66631964	G	A	-	-	-	-	-	-	28	0	0	53	9	16.98113208	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.839067703	0.839067703	1	0	0.0125	0.9875	0	0	0	0	3	7.10E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216022253	2	67663130	T	A	-	-	-	-	-	-	33	0	0	86	21	24.41860465	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.206566347	1.206566347	1	0	0	1	0	0	0	0	3	2.01E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216022747	2	71408067	C	A	PAIP2B	CCDS46322.1	r.?	-	-	downstream	36	0	0	51	8	15.68627451	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.775086505	0.775086505	1	0	0.0175	0.9825	0	0	0	0	3	2.05E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216022899	2	72744205	G	A	EXOC6B	CCDS46333.1	r.?	-	-	intronic	28	0	0	70	15	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	1.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216023438	2	76976476	G	A	LRRTM4	CCDS46346.1	r.?	-	-	intronic	51	0	0	76	14	18.42105263	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.910216718	0.910216718	1	0	0.00625	0.99375	0	0	0	0	3	3.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216023596	2	78196806	C	A	-	-	-	-	-	-	33	0	0	77	17	22.07792208	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.090909091	1.090909091	1	0	0	1	0	0	0	0	3	2.82E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216023722	2	79281127	C	A	-	-	-	-	-	-	30	0	0	47	14	29.78723404	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.4718398	1.4718398	1	0	0	1	0	0	0	0	3	1.79E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216023760	2	79662743	C	A	CTNNA2	CCDS42703.2	r.?	-	-	intronic	47	0	0	63	10	15.87301587	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.784313725	0.784313725	1	0.00125	0.01625	0.9825	0	0	0	0	3	9.81E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216023765	2	79752956	C	A	CTNNA2	CCDS42703.2	r.?	-	-	intronic	41	0	0	88	14	15.90909091	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.786096257	0.786096257	1	0	0.0075	0.9925	0	0	0	0	3	2.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216024089	2	82302203	G	A	-	-	-	-	-	-	38	0	0	71	19	26.76056338	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.322286661	1.322286661	1	0	0	1	0	0	0	0	3	1.29E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216024191	2	82978932	C	A	-	-	-	-	-	-	33	0	0	62	8	12.90322581	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.637571157	0.637571157	1	0.00125	0.0675	0.93125	0	0	0	0	3	1.04E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216024321	2	84048361	C	A	-	-	-	-	-	-	40	0	0	62	12	19.35483871	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.956356736	0.956356736	1	0	0.005	0.995	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216024899	2	88012580	C	A	-	-	-	-	-	-	24	0	0	72	13	18.05555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.892156863	0.892156863	1	0	0.0025	0.9975	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216025539	2	89990498	G	A	-	-	-	-	-	-	36	0	0	28	4	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.03875	0.96	0	0	0	0	3	1.16E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216025542	2	90008769	T	A	-	-	-	-	-	-	31	0	0	92	13	14.13043478	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.698209719	0.698209719	1	0	0.0325	0.9675	0	0	0	0	3	1.89E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216025560	2	90123600	C	A	-	-	-	-	-	-	38	0	0	62	5	8.064516129	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.398481973	0.398481973	1	0.06875	0.35375	0.5775	0	0	0	0	3	1.60E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216026065	2	90497265	G	A	-	-	-	-	-	-	7	1	14.28571429	14	4	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0.00875	0.99125	0	0	0	0	3	6.01E-07	0.034479353	1	1	NA	NA	NA
1353824	PD9772b	1216026865	2	91918791	T	A	-	-	-	-	-	-	101	0	0	198	16	8.080808081	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.399286988	0.399286988	1	0.09875	0.88375	0.0175	0	0	0	0	2	9.27E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216028796	2	95711338	G	A	MAL	CCDS2006.1	r.?	-	-	intronic	36	0	0	15	4	26.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0.00125	0.005	0.99375	0	0	0	0	3	8.16E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216029695	2	99993027	T	A	EIF5B	CCDS42721.1	r.1972u>a	c.1770T>A	p.D590E	missense	39	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0.00125	0.99875	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216030097	2	103292896	G	A	SLC9A2	CCDS2062.1	r.?	-	-	intronic	38	0	0	101	19	18.81188119	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.929528247	0.929528247	1	0	0	1	0	0	0	0	3	2.10E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216030187	2	104288452	C	A	-	-	-	-	-	-	34	0	0	85	12	14.11764706	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.697577855	0.697577855	1	0	0.03	0.97	0	0	0	0	3	2.29E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216030264	2	104817214	G	A	-	-	-	-	-	-	35	0	0	92	18	19.56521739	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.966751918	0.966751918	1	0	0.00125	0.99875	0	0	0	0	3	1.58E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216030285	2	104931119	G	A	-	-	-	-	-	-	34	0	0	30	7	23.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.152941176	1.152941176	1	0	0.0025	0.9975	0	0	0	0	3	1.44E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216030605	2	107641210	C	A	-	-	-	-	-	-	41	0	0	75	18	24	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.185882353	1.185882353	1	0	0	1	0	0	0	0	3	2.78E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216030606	2	107641211	C	A	-	-	-	-	-	-	39	0	0	74	17	22.97297297	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.135135135	1.135135135	1	0	0	1	0	0	0	0	3	1.34E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216030728	2	108705010	G	A	-	-	-	-	-	-	34	0	0	57	10	17.54385965	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.866873065	0.866873065	1	0	0.01375	0.98625	0	0	0	0	3	3.40E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216030753	2	108990861	G	A	SULT1C4	CCDS2077.1	r.?	-	-	upstream	33	0	0	66	10	15.15151515	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.748663102	0.748663102	1	0.00125	0.01125	0.9875	0	0	0	0	3	1.60E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216030964	2	110944317	C	A	NPHP1	CCDS2086.1	r.?	-	-	intronic	30	0	0	37	5	13.51351351	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.66772655	0.66772655	1	0.0025	0.0425	0.955	0	0	0	0	3	1.19E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216031945	2	116835880	C	A	-	-	-	-	-	-	35	0	0	76	7	9.210526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.455108359	0.455108359	1	0.04	0.34375	0.61625	0	0	0	0	3	1.26E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216032176	2	118477540	C	A	-	-	-	-	-	-	46	0	0	71	23	32.3943662	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.6006628	0.8003314	2	0	0.00125	0.99875	0	0	0	0	3	2.51E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216032504	2	120965581	T	A	-	-	-	-	-	-	41	0	0	86	14	16.27906977	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.804377565	0.804377565	1	0	0.005	0.995	0	0	0	0	3	1.98E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216032576	2	121673282	T	A	GLI2	CCDS33283.1	r.?	-	-	intronic	25	0	0	20	4	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.01	0.99	0	0	0	0	3	2.84E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216032730	2	122850852	T	A	-	-	-	-	-	-	41	0	0	79	9	11.39240506	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.562918838	0.562918838	1	0.00125	0.16125	0.8375	0	0	0	0	3	2.93E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216033018	2	125009176	C	A	CNTNAP5	CCDS46401.1	r.?	-	-	intronic	34	0	0	66	11	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01125	0.98875	0	0	0	0	3	4.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216033406	2	129151212	G	A	-	-	-	-	-	-	53	0	0	69	16	23.1884058	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.913895993	0.913895993	1	0	0.00375	0.99625	0	0	0	0	3	2.27E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216033572	2	130914127	C	A	SMPD4	CCDS42751.1	r.?	-	-	intronic	27	0	0	10	3	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0.0025	0.01125	0.98625	0	0	0	0	3	1.46E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216033606	2	131050438	G	A	-	-	-	-	-	-	27	0	0	60	17	28.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.116666667	1.116666667	1	0	0	1	0	0	0	0	3	2.41E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216035898	2	135569312	G	A	-	-	-	-	-	-	31	0	0	56	10	17.85714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.703781513	0.703781513	1	0.00125	0.03875	0.96	0	0	0	0	3	2.82E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216035951	2	136075216	T	A	ZRANB3	CCDS46419.1	r.?	-	-	intronic	25	0	0	68	17	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216036014	2	136766251	G	A	-	-	-	-	-	-	29	0	0	34	12	35.29411765	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.39100346	1.39100346	1	0	0	1	0	0	0	0	3	1.21E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216036172	2	138316817	G	A	THSD7B	ENST00000409968	r.?	-	-	intronic	32	0	0	75	15	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.0125	0.9875	0	0	0	0	3	5.25E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216036173	2	138320327	G	A	THSD7B	ENST00000409968	r.?	-	-	intronic	36	0	0	43	14	32.55813953	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.283173735	1.283173735	1	0	0	1	0	0	0	0	3	4.18E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216036326	2	139889778	C	A	-	-	-	-	-	-	28	0	0	52	12	23.07692308	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.909502262	0.909502262	1	0	0.00125	0.99875	0	0	0	0	3	4.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216036703	2	142850110	C	A	LRP1B	CCDS2182.1	r.?	-	-	intronic	34	0	0	68	25	36.76470588	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.448961938	0.724480969	2	0	0.02125	0.97875	0	0	0	0	3	6.41E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216036734	2	143079018	G	A	-	-	-	-	-	-	42	0	0	62	17	27.41935484	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.080645161	1.080645161	1	0	0.00125	0.99875	0	0	0	0	3	4.56E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216037238	2	148444698	C	A	-	-	-	-	-	-	35	0	0	45	10	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.005	0.995	0	0	0	0	3	2.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216037242	2	148477909	G	A	-	-	-	-	-	-	38	0	0	71	14	19.71830986	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.777133389	0.777133389	1	0	0.015	0.985	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216037251	2	148534505	T	A	-	-	-	-	-	-	38	0	0	31	9	29.03225806	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.144212524	1.144212524	1	0	0.00125	0.99875	0	0	0	0	3	3.57E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216037306	2	149245647	G	A	MBD5	CCDS33302.1	r.?	-	-	intronic	28	0	0	62	16	25.80645161	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.017077799	1.017077799	1	0	0.00125	0.99875	0	0	0	0	3	3.36E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216037538	2	151094383	C	A	-	-	-	-	-	-	18	0	0	59	14	23.72881356	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.935194417	0.935194417	1	0	0.00125	0.99875	0	0	0	0	3	6.58E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216038052	2	156271587	G	A	-	-	-	-	-	-	29	0	0	61	16	26.2295082	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.033751205	1.033751205	1	0	0.0025	0.9975	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216038866	2	165863571	T	A	-	-	-	-	-	-	42	0	0	66	30	45.45454545	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.79144385	0.895721925	2	0	0	1	0	0	0	0	3	4.31E-51	1	1	1	NA	NA	NA
1353824	PD9772b	1216038876	2	165981328	T	A	SCN3A	CCDS33312.1	r.?	-	-	intronic	40	0	0	96	23	23.95833333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.944240196	0.944240196	1	0	0	1	0	0	0	0	3	7.21E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216039350	2	170811930	C	A	UBR3	CCDS2238.2	r.?	-	-	intronic	36	0	0	46	9	19.56521739	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.771099744	0.771099744	1	0	0.01875	0.98125	0	0	0	0	3	1.82E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216039474	2	171953404	C	A	TLK1	CCDS2241.1	r.?	-	-	intronic	31	0	0	55	16	29.09090909	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.146524064	1.146524064	1	0	0	1	0	0	0	0	3	3.78E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216039651	2	173796137	G	A	RAPGEF4	CCDS42775.1	r.?	-	-	intronic	24	0	0	30	8	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.0025	0.9975	0	0	0	0	3	2.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216039801	2	175310447	C	A	GPR155	CCDS2259.1	r.?	-	-	intronic	25	0	0	92	27	29.34782609	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.450127877	0.725063939	2	0	0.025	0.975	0	0	0	0	3	7.54E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216039902	2	176334688	G	A	-	-	-	-	-	-	30	0	0	93	21	22.58064516	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.115749526	1.115749526	1	0	0	1	0	0	0	0	3	1.25E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216039979	2	176966698	G	A	HOXD12	CCDS46456.1	r.?	-	-	downstream	26	0	0	32	12	37.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.852941176	0.926470588	2	0	0.00125	0.99875	0	0	0	0	3	5.03E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216040384	2	179630245	T	A	TTN	ENST00000342992	r.?	-	-	intronic	31	0	0	70	21	30	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.482352941	0.741176471	2	0	0.01875	0.98125	0	0	0	0	3	1.45E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216040611	2	181419989	C	A	-	-	-	-	-	-	28	0	0	34	7	20.58823529	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.017301038	1.017301038	1	0	0.01125	0.98875	0	0	0	0	3	3.73E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216040659	2	181808338	G	A	-	-	-	-	-	-	38	0	0	75	14	18.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0.005	0.995	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216041001	2	184754143	T	A	-	-	-	-	-	-	32	0	0	53	16	30.18867925	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.491675916	1.491675916	1	0	0	1	0	0	0	0	3	1.90E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216041007	2	184793348	C	A	-	-	-	-	-	-	47	0	0	80	18	22.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.111764706	1.111764706	1	0	0	1	0	0	0	0	3	1.01E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216041064	2	185240610	C	A	-	-	-	-	-	-	41	0	0	77	16	20.77922078	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.026737968	1.026737968	1	0	0	1	0	0	0	0	3	1.56E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216041118	2	185759110	G	A	ZNF804A	CCDS2291.1	r.?	-	-	intronic	31	0	0	55	11	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216041154	2	186099725	G	A	-	-	-	-	-	-	25	0	0	70	12	17.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.847058824	0.847058824	1	0	0.00625	0.99375	0	0	0	0	3	1.99E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216041446	2	188440145	G	A	-	-	-	-	-	-	33	0	0	71	19	26.76056338	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.322286661	1.322286661	1	0	0	1	0	0	0	0	3	1.29E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216041601	2	189554475	C	A	-	-	-	-	-	-	34	0	0	50	10	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00625	0.99375	0	0	0	0	3	8.36E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216042202	2	194059363	G	A	-	-	-	-	-	-	29	0	0	76	13	17.10526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.845201238	0.845201238	1	0	0.005	0.995	0	0	0	0	3	1.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216042207	2	194127601	T	A	-	-	-	-	-	-	50	0	0	97	12	12.37113402	199	0	0	203	27	13.30049261							4	2	2	1	NA	NA	NA	unphased	0.611279563	0.611279563	1	0.00125	0.115	0.88375	0	0	0	0	3	1.18E-13	1	9.60E-30	1	YES	somatic	1_1
1353824	PD9772b	1216042361	2	195289244	G	A	-	-	-	-	-	-	37	0	0	71	14	19.71830986	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.974316487	0.974316487	1	0	0.00375	0.99625	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216042471	2	196327212	T	A	-	-	-	-	-	-	27	0	0	82	13	15.85365854	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.783357245	0.783357245	1	0	0.01	0.99	0	0	0	0	3	3.95E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216042517	2	196878309	G	A	DNAH7	CCDS42794.1	r.?	-	-	intronic	40	0	0	80	14	17.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.864705882	0.864705882	1	0	0.005	0.995	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216042836	2	199276905	T	A	-	-	-	-	-	-	41	0	0	72	19	26.38888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.303921569	1.303921569	1	0	0	1	0	0	0	0	3	1.75E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216043255	2	202142947	G	A	CASP8	CCDS42798.1	r.?	-	-	intronic	24	0	0	79	18	22.78481013	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.125837677	1.125837677	1	0	0	1	0	0	0	0	3	7.86E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216043293	2	202466127	G	A	ALS2CR11	CCDS2349.1	r.?	-	-	intronic	25	0	0	71	19	26.76056338	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.322286661	1.322286661	1	0	0	1	0	0	0	0	3	1.29E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216043479	2	203646101	G	A	ICA1L	CCDS2354.1	r.?	-	-	intronic	26	0	0	57	15	26.31578947	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.300309598	1.300309598	1	0	0	1	0	0	0	0	3	5.53E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216043612	2	204363102	G	A	RAPH1	CCDS2359.1	r.?	-	-	intronic	42	0	0	66	16	24.24242424	240	0	0	138	26	18.84057971							4	2	2	1	NA	NA	NA	unphased	1.197860963	1.197860963	1	0	0.00125	0.99875	0	0	0	0	3	1.03E-22	1	7.54E-33	1	YES	somatic	1_1
1353824	PD9772b	1216043790	2	206240696	G	A	PARD3B	CCDS42806.1	r.?	-	-	intronic	29	0	0	76	13	17.10526316	0	0	NA	2	0	0							3	2	1	1	NA	NA	NA	unphased	0.674148607	0.674148607	1	0.0025	0.055	0.9425	0	0	0	0	3	1.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216043874	2	207041465	G	A	GPR1	CCDS2368.1	r.889c>u	c.507C>T	p.G169G	silent	31	0	0	62	14	22.58064516	268	0	0	132	29	21.96969697							3	2	1	1	NA	NA	NA	unphased	0.889943074	0.889943074	1	0	0.00125	0.99875	0	0	0	0	3	1.42E-19	1	1.44E-38	1	YES	somatic	1_1
1353824	PD9772b	1216043902	2	207401109	T	A	ADAM23	CCDS2369.1	r.?	-	-	intronic	32	0	0	68	15	22.05882353	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.869377163	0.869377163	1	0	0.0025	0.9975	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216043923	2	207732241	C	A	-	-	-	-	-	-	35	0	0	51	9	17.64705882	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.69550173	0.69550173	1	0.00125	0.0375	0.96125	0	0	0	0	3	4.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216043925	2	207746956	C	A	-	-	-	-	-	-	30	0	0	68	13	19.11764706	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.753460208	0.753460208	1	0.00125	0.0275	0.97125	0	0	0	0	3	2.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216044116	2	209518694	C	A	-	-	-	-	-	-	34	0	0	68	16	23.52941176	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.0025	0.9975	0	0	0	0	3	1.75E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216044657	2	215017224	C	A	SPAG16	CCDS2396.1	r.?	-	-	intronic	31	0	0	45	14	31.11111111	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.226143791	1.226143791	1	0	0.00125	0.99875	0	0	0	0	3	8.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216044666	2	215045720	T	A	SPAG16	CCDS2396.1	r.?	-	-	intronic	32	0	0	54	13	24.07407407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.948801743	0.948801743	1	0	0.005	0.995	0	0	0	0	3	1.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216044735	2	215782220	G	A	-	-	-	-	-	-	27	0	0	50	17	34	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.34	1.34	1	0	0	1	0	0	0	0	3	6.43E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216044837	2	216652976	G	A	-	-	-	-	-	-	33	0	0	50	12	24	240	0	0	61	8	13.1147541							3	2	1	1	NA	NA	NA	unphased	0.945882353	0.945882353	1	0	0.0075	0.9925	0	0	0	0	3	2.49E-17	1	9.09E-10	1	YES	somatic	1_1
1353824	PD9772b	1216044979	2	218004352	G	A	-	-	-	-	-	-	19	0	0	73	23	31.50684932	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.241740532	1.241740532	1	0	0	1	0	0	0	0	3	5.33E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216045051	2	218835235	G	A	TNS1	ENST00000446903	r.?	-	-	intronic	34	0	0	63	21	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	1.08E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216045183	2	220451568	C	A	-	-	-	-	-	-	34	0	0	66	19	28.78787879	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.134581105	1.134581105	1	0	0	1	0	0	0	0	3	2.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216045337	2	222054116	G	A	-	-	-	-	-	-	34	0	0	52	13	25	261	0	0	151	44	29.13907285							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	6.47E-19	1	8.90E-64	1	YES	somatic	1_1
1353824	PD9772b	1216045527	2	223655921	T	A	-	-	-	-	-	-	16	0	0	36	13	36.11111111	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.423202614	1.423202614	1	0	0	1	0	0	0	0	3	2.53E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216045796	2	226214785	C	A	-	-	-	-	-	-	44	0	0	67	18	26.86567164	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.0025	0.9975	0	0	0	0	3	2.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216046699	2	235226683	T	A	-	-	-	-	-	-	40	0	0	55	13	23.63636364	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.931550802	0.931550802	1	0	0.0025	0.9975	0	0	0	0	3	1.46E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216046765	2	235759671	C	A	-	-	-	-	-	-	34	0	0	40	14	35	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.379411765	1.379411765	1	0	0	1	0	0	0	0	3	1.25E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216047292	2	242524597	G	A	THAP4	CCDS2551.1	r.?	-	-	intronic	41	0	0	37	8	21.62162162	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.852146264	0.852146264	1	0	0.01	0.99	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216047431	20	783778	G	A	-	-	-	-	-	-	34	0	0	71	34	47.88732394	0	0	NA	0	0	NA							2.610339761	2	0	0.389660239	2	1	0.610339761	unphased	1.700726083	0.850363041	2	0	0	1	0	0	0	0	3	1.02E-58	1	1	1	NA	NA	NA
1353824	PD9772b	1216047521	20	1559507	G	A	SIRPB1	CCDS13019.1	r.?	-	-	intronic	34	0	0	41	15	36.58536585	0	0	NA	0	0	NA							2.610339761	2	0	0.389660239	2	1	0.610339761	unphased	1.299335207	1.299335207	1	0	0	1	0	0	0	0	3	1.71E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216048002	20	5806758	T	A	C20orf196	CCDS13091.1	r.?	-	-	intronic	26	0	0	39	13	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.00125	0.99875	0	0	0	0	3	8.79E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216048846	20	14507949	G	A	MACROD2	CCDS13120.2	r.?	-	-	intronic	43	0	0	28	5	17.85714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.703781513	0.703781513	1	0.00125	0.03	0.96875	0	0	0	0	3	2.79E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216049387	20	20281004	G	A	C20orf26	CCDS33447.1	r.?	-	-	intronic	33	0	0	55	18	32.72727273	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.289839572	1.289839572	1	0	0	1	0	0	0	0	3	4.61E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216049422	20	20720286	C	A	-	-	-	-	-	-	21	0	0	63	13	20.63492063	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.813258637	0.813258637	1	0	0.0075	0.9925	0	0	0	0	3	1.01E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216049512	20	21645801	G	A	-	-	-	-	-	-	42	0	0	65	16	24.61538462	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.970135747	0.970135747	1	0	0.00375	0.99625	0	0	0	0	3	7.85E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216049528	20	21895941	C	A	-	-	-	-	-	-	19	0	0	45	5	11.11111111	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.437908497	0.437908497	1	0.02625	0.25625	0.7175	0	0	0	0	3	3.23E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216049544	20	22067286	T	A	-	-	-	-	-	-	45	0	0	65	8	12.30769231	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.485067873	0.485067873	1	0.0225	0.305	0.6725	0	0	0	0	3	1.53E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216049746	20	24248580	G	A	-	-	-	-	-	-	32	0	0	53	13	24.52830189	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.966703663	0.966703663	1	0	0.00125	0.99875	0	0	0	0	3	8.53E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216049792	20	24850377	C	A	-	-	-	-	-	-	28	0	0	57	15	26.31578947	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.037151703	1.037151703	1	0	0	1	0	0	0	0	3	5.53E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216049794	20	24860525	C	A	-	-	-	-	-	-	30	1	3.333333333	18	9	50	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.970588235	0.985294118	2	0	0.005	0.995	0	0	0	0	3	9.12E-17	0.139615808	1	1	NA	NA	NA
1353824	PD9772b	1216049808	20	25164172	C	A	-	-	-	-	-	-	32	0	0	42	11	26.19047619	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.032212885	1.032212885	1	0	0.00375	0.99625	0	0	0	0	3	1.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216052535	20	29542026	G	A	-	-	-	-	-	-	36	0	0	80	12	15	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.441176471	0.441176471	1	0.06125	0.80125	0.1375	0	0	0	0	2	1.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216055843	20	39726580	G	A	TOP1	CCDS13312.1	r.?	-	-	intronic	42	0	0	71	21	29.57746479	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.165700083	1.165700083	1	0	0	1	0	0	0	0	3	2.05E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216055882	20	40532977	C	A	-	-	-	-	-	-	44	0	0	58	14	24.13793103	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.951318458	0.951318458	1	0	0.00125	0.99875	0	0	0	0	3	5.04E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216055912	20	40878863	G	A	PTPRT	CCDS42874.1	r.?	-	-	intronic	29	0	0	69	15	21.73913043	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.856777494	0.856777494	1	0	0.00625	0.99375	0	0	0	0	3	1.34E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216056122	20	43853042	G	A	SEMG2	CCDS13346.1	r.1994g>a	c.?	p.?	3'UTR variant	21	0	0	55	12	21.81818182	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.859893048	0.859893048	1	0	0.0025	0.9975	0	0	0	0	3	8.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216056158	20	44234962	C	A	WFDC9	CCDS13362.1	r.?	-	-	downstream	29	0	0	64	20	31.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.231617647	1.231617647	1	0	0	1	0	0	0	0	3	1.52E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216056262	20	45669413	G	A	EYA2	CCDS13403.1	r.?	-	-	intronic	40	0	0	43	13	30.23255814	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.191518468	1.191518468	1	0	0.00125	0.99875	0	0	0	0	3	3.88E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216056272	20	45835116	G	A	ZMYND8	CCDS46613.1	r.?	-	-	downstream	32	0	0	37	15	40.54054054	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.597774245	0.798887122	2	0	0.00375	0.99625	0	0	0	0	3	2.58E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216056717	20	50336557	C	A	ATP9A	CCDS33489.1	r.?	-	-	intronic	27	0	0	44	11	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	3.22E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216057207	20	54688507	T	A	-	-	-	-	-	-	29	0	0	70	21	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0	1	0	0	0	0	3	1.45E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216057561	20	58782966	G	A	-	-	-	-	-	-	37	0	0	38	11	28.94736842	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.140866873	1.140866873	1	0	0.00125	0.99875	0	0	0	0	3	5.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216057598	20	59146970	G	A	ENSG00000237240	ENST00000456299	r.?	-	-	intronic	40	0	0	60	15	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216061058	21	9957975	G	A	ENSG00000227328	ENST00000416067	r.?	-	-	intronic	151	0	0	17	4	23.52941176	0	0	NA	0	0	NA							2.450190455	1	1	0.549809545	2	1	0.450190455	unphased	0.797968688	0.797968688	1	0.0025	0.02125	0.97625	0	0	0	0	3	1.41E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216063873	21	10482515	C	A	-	-	-	-	-	-	65	0	0	118	8	6.779661017	0	0	NA	0	0	NA							2.450190455	1	1	0.549809545	2	1	0.450190455	unphased	0.229923181	0.510724247	0.450190455	0.0075	0.20375	0.78875	0	0	0	0	3	1.75E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216069126	21	16653675	T	A	-	-	-	-	-	-	30	0	0	60	20	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	0.823529412	2	0	0.00125	0.99875	0	0	0	0	3	3.30E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216069137	21	16759824	G	A	-	-	-	-	-	-	34	0	0	59	17	28.81355932	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.423728814	1.423728814	1	0	0	1	0	0	0	0	3	1.74E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216069206	21	17324456	C	A	-	-	-	-	-	-	27	0	0	87	20	22.98850575	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.135902637	1.135902637	1	0	0	1	0	0	0	0	3	1.65E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216069328	21	18388496	G	A	-	-	-	-	-	-	48	0	0	84	14	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01	0.99	0	0	0	0	3	1.40E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216069364	21	18651630	C	A	-	-	-	-	-	-	34	0	0	27	5	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.0125	0.9875	0	0	0	0	3	2.30E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216069650	21	20612618	T	A	-	-	-	-	-	-	47	0	0	80	18	22.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.111764706	1.111764706	1	0	0	1	0	0	0	0	3	1.01E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216069651	21	20633448	C	A	-	-	-	-	-	-	39	0	0	68	13	19.11764706	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.944636678	0.944636678	1	0	0.00375	0.99625	0	0	0	0	3	2.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216069705	21	21068520	G	A	-	-	-	-	-	-	26	0	0	81	18	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.00125	0.99875	0	0	0	0	3	1.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216070159	21	24487315	C	A	-	-	-	-	-	-	41	0	0	59	10	16.94915254	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.837487537	0.837487537	1	0	0.01375	0.98625	0	0	0	0	3	4.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216070320	21	25651684	G	A	-	-	-	-	-	-	43	0	0	67	9	13.43283582	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.663740123	0.663740123	1	0.0025	0.0475	0.95	0	0	0	0	3	6.43E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216070589	21	27343641	G	A	APP	CCDS33523.1	r.?	-	-	intronic	41	0	0	48	10	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.00875	0.99125	0	0	0	0	3	5.37E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216071001	21	30021707	T	A	-	-	-	-	-	-	38	0	0	75	10	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0	0.0425	0.9575	0	0	0	0	3	6.02E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216071226	21	31876035	T	A	KRTAP19-5	CCDS13597.1	r.?	-	-	upstream	39	0	0	61	12	19.67213115	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.972034716	0.972034716	1	0	0.00375	0.99625	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216071284	21	32341336	G	A	-	-	-	-	-	-	25	0	0	41	5	12.19512195	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.602582496	0.602582496	1	0.00375	0.0675	0.92875	0	0	0	0	3	2.02E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216071552	21	33996119	G	A	SYNJ1	CCDS33539.1	r.?	-	-	downstream	38	0	0	71	16	22.53521127	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.113504557	1.113504557	1	0	0	1	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216071572	21	34138850	C	A	C21orf66	CCDS13619.1	r.?	-	-	intronic	26	0	0	71	18	25.35211268	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.252692626	1.252692626	1	0	0	1	0	0	0	0	3	9.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216072006	21	37569705	C	A	DOPEY2	CCDS13643.1	r.?	-	-	intronic	21	0	0	40	8	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	2.61E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216072179	21	38811077	T	A	DYRK1A	CCDS13653.1	r.?	-	-	intronic	33	0	0	101	19	18.81188119	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.929528247	0.929528247	1	0	0	1	0	0	0	0	3	2.10E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216072197	21	38939150	G	A	-	-	-	-	-	-	33	0	0	71	11	15.49295775	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.765534383	0.765534383	1	0	0.0225	0.9775	0	0	0	0	3	9.49E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216072251	21	39300860	G	A	-	-	-	-	-	-	38	0	0	105	23	21.9047619	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.082352941	1.082352941	1	0	0	1	0	0	0	0	3	7.08E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216072479	21	41115353	C	A	IGSF5	CCDS33562.1	r.?	-	-	upstream	41	0	0	72	12	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0.00125	0.00875	0.99	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216072688	21	42498595	G	A	-	-	-	-	-	-	34	0	0	64	14	21.875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.080882353	1.080882353	1	0	0.00125	0.99875	0	0	0	0	3	2.31E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216072786	21	43363581	G	A	C2CD2	CCDS13677.1	r.?	-	-	intronic	31	0	0	47	5	10.63829787	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.525657071	0.525657071	1	0.0125	0.0975	0.89	0	0	0	0	3	4.02E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216073021	21	45855853	T	A	TRPM2	CCDS13710.1	r.?	-	-	intronic	21	0	0	13	4	30.76923077	0	0	NA	0	0	NA							0.114544422	0	0	0.885455578	1	0	0.114544422	unphased	0.324837198	0.324837198	1	0.22875	0.74625	0.025	0	0	0	0	2	4.31E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216073093	21	46884091	C	A	COL18A1	ENST00000359759	r.?	-	-	intronic	28	0	0	10	3	30	0	0	NA	0	0	NA							0.114544422	0	0	0.885455578	1	0	0.114544422	unphased	0.316716268	0.316716268	1	0.24125	0.735	0.02375	0	0	0	0	2	1.46E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216073147	21	47315090	G	A	PCBP3	CCDS42974.2	r.?	-	-	intronic	36	0	0	28	5	17.85714286	0	0	NA	0	0	NA							0.114544422	0	0	0.885455578	1	0	0.114544422	unphased	0.188521588	1.645838218	0.114544422	0	0.0075	0.9925	0	0	0	0	3	2.79E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216073218	21	47785098	C	A	PCNT	CCDS33592.1	r.?	-	-	intronic	35	0	0	17	3	17.64705882	0	0	NA	0	0	NA							0.114544422	0	0	0.885455578	1	0	0.114544422	unphased	0.186303687	1.626475415	0.114544422	0	0.00875	0.99125	0	0	0	0	3	8.07E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216075357	22	22611367	C	A	-	-	-	-	-	-	50	0	0	15	3	20	0	0	NA	0	0	NA							0.35554569	0	0	0.64445431	1	0	0.35554569	unphased	0.259344432	0.729426454	0.35554569	0.00375	0.02375	0.9725	0	0	0	0	3	5.44E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216075553	22	23702081	T	A	-	-	-	-	-	-	28	0	0	67	22	32.8358209	0	0	NA	0	0	NA							1.861997243	1	0	0.138002757	1	1	0.861997243	unphased	0.9204451	1.067805155	0.861997243	0	0	1	0	0	0	0	3	5.21E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216077022	22	34381173	T	A	-	-	-	-	-	-	27	0	0	16	6	37.5	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.481083884	0.481083884	1	0.04375	0.65125	0.305	0	0	0	0	2	1.20E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216077107	22	35385055	C	A	-	-	-	-	-	-	42	0	0	59	17	28.81355932	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.369646374	1.081742325	0.341713887	0	0	1	0	0	0	0	3	1.74E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216077327	22	38397808	G	A	ENSG00000215400	ENST00000400216	r.?	-	-	intronic	30	0	0	40	10	25	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.320722589	0.938570546	0.341713887	0	0.00375	0.99625	0	0	0	0	3	7.22E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216077472	22	40254273	T	A	ENTHD1	CCDS13998.1	r.?	-	-	intronic	32	0	0	61	18	29.50819672	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.37855781	1.107820973	0.341713887	0	0	1	0	0	0	0	3	4.08E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216077591	22	41446869	C	A	-	-	-	-	-	-	25	0	0	29	8	27.5862069	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.353900788	1.035664051	0.341713887	0	0.00125	0.99875	0	0	0	0	3	1.53E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216077795	22	44284639	T	A	PNPLA5	CCDS14053.1	r.?	-	-	intronic	27	0	0	37	10	27.02702703	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.346727124	1.014670861	0.341713887	0	0.0025	0.9975	0	0	0	0	3	3.01E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216077925	22	46004237	C	A	-	-	-	-	-	-	35	0	0	45	11	24.44444444	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.313595421	0.917713423	0.341713887	0	0	1	0	0	0	0	3	4.24E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216078015	22	47427415	C	A	TBC1D22A	CCDS14078.1	r.?	-	-	intronic	33	0	0	8	3	37.5	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.481083884	0.481083884	1	0.02125	0.21375	0.765	0	0	0	0	3	6.87E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216078098	22	48472825	C	A	-	-	-	-	-	-	38	0	0	21	4	19.04761905	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.244360068	0.715101369	0.341713887	0	0.03125	0.96875	0	0	0	0	3	3.49E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216078252	22	50109563	G	A	-	-	-	-	-	-	46	0	0	12	4	33.33333333	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.427630119	0.427630119	1	0.07125	0.605	0.32375	0	0	0	0	2	3.00E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216079066	3	5407802	C	A	-	-	-	-	-	-	31	0	0	59	14	23.72881356	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.935194417	0.935194417	1	0	0.0025	0.9975	0	0	0	0	3	6.58E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216079275	3	7174458	G	A	GRM7	CCDS43042.1	r.?	-	-	intronic	29	0	0	64	19	29.6875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.170036765	1.170036765	1	0	0	1	0	0	0	0	3	1.34E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216079384	3	8410620	G	A	ENSG00000234563	ENST00000446572	r.?	-	-	intronic	33	0	0	35	9	25.71428571	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.013445378	1.013445378	1	0	0.0075	0.9925	0	0	0	0	3	1.23E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216079390	3	8492539	G	A	ENSG00000234563	ENST00000446572	r.?	-	-	intronic	36	0	0	50	10	20	2	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.02125	0.97875	0	0	0	0	3	8.36E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216079400	3	8537599	C	A	-	-	-	-	-	-	30	0	0	73	20	27.39726027	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.079774376	1.079774376	1	0	0.00125	0.99875	0	0	0	0	3	3.18E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216079638	3	10869380	G	A	SLC6A11	CCDS2602.1	r.?	-	-	intronic	43	0	0	54	17	31.48148148	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.240740741	1.240740741	1	0	0.0025	0.9975	0	0	0	0	3	3.02E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216079650	3	11108123	G	A	-	-	-	-	-	-	47	0	0	46	6	13.04347826	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.514066496	0.514066496	1	0.01625	0.175	0.80875	0	0	0	0	3	1.23E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216079902	3	13998008	T	A	TPRXL	ENST00000326972	r.?	-	-	intronic	34	0	0	55	21	38.18181818	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.504812834	0.752406417	2	0	0.01	0.99	0	0	0	0	3	3.41E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216080169	3	17215619	G	A	TBC1D5	CCDS33714.1	r.?	-	-	intronic	33	0	0	63	13	20.63492063	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.813258637	0.813258637	1	0	0.00375	0.99625	0	0	0	0	3	1.01E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216080733	3	22926418	T	A	-	-	-	-	-	-	32	0	0	66	16	24.24242424	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.95543672	0.95543672	1	0	0.0025	0.9975	0	0	0	0	3	1.03E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216080959	3	25444293	G	A	RARB	ENST00000404969	r.?	-	-	intronic	46	0	0	48	14	29.16666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.149509804	1.149509804	1	0	0	1	0	0	0	0	3	2.51E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216080985	3	25781793	C	A	NGLY1	CCDS46778.1	r.?	-	-	intronic	47	0	0	87	22	25.28735632	142	0	0	337	57	16.91394659							3	2	1	1	NA	NA	NA	unphased	0.996619337	0.996619337	1	0	0	1	0	0	0	0	3	3.97E-31	1	3.37E-67	1	YES	somatic	1_1
1353824	PD9772b	1216081163	3	27589026	G	A	-	-	-	-	-	-	42	0	0	63	16	25.3968254	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.000933707	1.000933707	1	0	0.00125	0.99875	0	0	0	0	3	4.48E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216081757	3	34700400	C	A	-	-	-	-	-	-	31	0	0	71	20	28.16901408	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.110190555	1.110190555	1	0	0	1	0	0	0	0	3	1.68E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216083048	3	46866803	T	A	PRSS42	ENST00000447340	r.?	-	-	downstream	37	0	0	72	18	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216083511	3	53040687	C	A	SFMBT1	CCDS2867.1	r.?	-	-	intronic	30	0	0	41	12	29.26829268	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.153515065	1.153515065	1	0	0.00375	0.99625	0	0	0	0	3	1.69E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216083580	3	53826428	G	A	CACNA1D	CCDS2872.1	r.?	-	-	intronic	40	0	0	37	13	35.13513514	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.384737679	1.384737679	1	0	0	1	0	0	0	0	3	3.89E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216083753	3	55380586	C	A	-	-	-	-	-	-	31	0	0	37	8	21.62162162	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.852146264	0.852146264	1	0	0.01	0.99	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216083772	3	55683807	G	A	ERC2	CCDS46851.1	r.?	-	-	intronic	35	0	0	24	6	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0075	0.9925	0	0	0	0	3	1.95E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216084193	3	59974930	C	A	FHIT	CCDS2894.1	r.?	-	-	intronic	39	0	0	79	14	17.72151899	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.698436337	0.698436337	1	0.00125	0.045	0.95375	0	0	0	0	3	5.60E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216084337	3	61388673	G	A	-	-	-	-	-	-	43	0	0	85	15	17.64705882	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.69550173	0.69550173	1	0	0.0425	0.9575	0	0	0	0	3	3.95E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216085053	3	68779702	T	A	FAM19A4	CCDS2907.1	r.?	-	-	downstream	40	1	2.5	65	15	23.07692308	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.909502262	0.909502262	1	0	0.00125	0.99875	0	0	0	0	3	5.00E-21	0.181679879	1	1	NA	NA	NA
1353824	PD9772b	1216085211	3	70229848	C	A	-	-	-	-	-	-	37	0	0	67	14	20.89552239	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.00625	0.99375	0	0	0	0	3	4.66E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216087631	3	76729986	G	A	ROBO2	ENST00000487694	r.?	-	-	intronic	38	0	0	25	8	32	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.261176471	1.261176471	1	0	0	1	0	0	0	0	3	3.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216087663	3	77022402	C	A	ROBO2	ENST00000487694	r.?	-	-	intronic	47	0	0	61	14	22.95081967	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.904532305	0.904532305	1	0	0.0025	0.9975	0	0	0	0	3	1.10E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216087718	3	77533803	C	A	ROBO2	CCDS43109.1	r.?	-	-	intronic	33	0	0	57	15	26.31578947	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.037151703	1.037151703	1	0	0	1	0	0	0	0	3	5.53E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216087920	3	79392006	G	A	ROBO1	ENST00000464233	r.?	-	-	intronic	32	0	0	67	18	26.86567164	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	2.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216087951	3	79772335	C	A	ROBO1	ENST00000464233	r.?	-	-	intronic	35	0	0	59	15	25.42372881	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.001994018	1.001994018	1	0	0	1	0	0	0	0	3	9.90E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216088298	3	83638475	G	A	-	-	-	-	-	-	33	0	0	64	16	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	5.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216088339	3	84282765	T	A	-	-	-	-	-	-	34	0	0	36	8	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.0125	0.9875	0	0	0	0	3	1.04E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216088418	3	84823965	C	A	-	-	-	-	-	-	48	0	0	42	9	21.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.844537815	0.844537815	1	0	0.01	0.99	0	0	0	0	3	7.51E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216088433	3	84952633	G	A	-	-	-	-	-	-	34	0	0	37	8	21.62162162	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.852146264	0.852146264	1	0.00125	0.01	0.98875	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216088843	3	89546394	C	A	-	-	-	-	-	-	37	0	0	57	9	15.78947368	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.780185759	0.780185759	1	0.00125	0.025	0.97375	0	0	0	0	3	1.42E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216088849	3	89650189	G	A	-	-	-	-	-	-	36	0	0	69	12	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.00875	0.99125	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216089738	3	95818553	T	A	-	-	-	-	-	-	32	0	0	81	17	20.98765432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.037037037	1.037037037	1	0	0.00125	0.99875	0	0	0	0	3	7.24E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216089796	3	96075649	C	A	-	-	-	-	-	-	34	0	0	64	15	23.4375	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.158088235	1.158088235	1	0	0	1	0	0	0	0	3	3.87E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216090014	3	97986331	C	A	OR5H6	CCDS33800.1	r.?	-	-	downstream	19	0	0	50	14	28	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.383529412	1.383529412	1	0	0	1	0	0	0	0	3	4.84E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216090096	3	98628262	C	A	-	-	-	-	-	-	47	0	0	80	19	23.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.173529412	1.173529412	1	0	0	1	0	0	0	0	3	1.65E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216090222	3	99884702	G	A	C3orf26	CCDS2935.1	r.?	-	-	intronic	44	0	0	86	23	26.74418605	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.321477428	1.321477428	1	0	0	1	0	0	0	0	3	4.16E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216090311	3	100593809	G	A	ABI3BP	CCDS46880.1	r.?	-	-	intronic	45	0	0	83	22	26.5060241	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.309709426	1.309709426	1	0	0	1	0	0	0	0	3	1.23E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216090613	3	102559836	T	A	-	-	-	-	-	-	24	0	0	85	17	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0	1	0	0	0	0	3	1.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216090774	3	103954323	G	A	-	-	-	-	-	-	34	0	0	68	17	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216091061	3	106152076	G	A	-	-	-	-	-	-	27	0	0	29	5	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0.0025	0.02625	0.97125	0	0	0	0	3	3.36E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216091247	3	107571194	G	A	-	-	-	-	-	-	44	0	0	79	12	15.18987342	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.750558451	0.750558451	1	0	0.0175	0.9825	0	0	0	0	3	9.17E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216092190	3	116534918	C	A	LSAMP	ENST00000474851	r.?	-	-	intronic	32	0	0	64	16	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	5.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216092616	3	120770443	G	A	STXBP5L	CCDS43137.1	r.?	-	-	intronic	40	0	0	59	12	20.33898305	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.801595214	0.801595214	1	0	0.0025	0.9975	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216092889	3	123560775	C	A	MYLK	CCDS3023.1	r.?	-	-	intronic	42	0	0	75	21	28	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.103529412	1.103529412	1	0	0	1	0	0	0	0	3	7.75E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216093258	3	125907186	T	A	ALDH1L1	ENST00000509952	r.?	-	-	intronic	33	0	0	83	13	15.6626506	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.6172927	0.6172927	1	0.00125	0.1025	0.89625	0	0	0	0	3	4.66E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216093692	3	129972623	G	A	-	-	-	-	-	-	34	0	0	42	14	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.00125	0.99875	0	0	0	0	3	2.83E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216093791	3	131123295	C	A	-	-	-	-	-	-	30	0	0	56	17	30.35714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.196428571	1.196428571	1	0	0	1	0	0	0	0	3	6.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216094229	3	135556890	C	A	-	-	-	-	-	-	37	0	0	54	13	24.07407407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.948801743	0.948801743	1	0	0	1	0	0	0	0	3	1.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216094593	3	139803241	C	A	CLSTN2	CCDS3112.1	r.?	-	-	intronic	39	0	0	80	21	26.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.034558824	1.034558824	1	0	0	1	0	0	0	0	3	3.63E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216094970	3	144056258	T	A	-	-	-	-	-	-	47	0	0	69	24	34.7826087	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.37084399	0.685421995	2	0	0.0625	0.9375	0	0	0	0	3	1.11E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216095060	3	144834746	T	A	-	-	-	-	-	-	27	0	0	48	13	27.08333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.067401961	1.067401961	1	0	0.00125	0.99875	0	0	0	0	3	2.00E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216095202	3	146273985	G	A	-	-	-	-	-	-	39	0	0	63	14	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.005	0.995	0	0	0	0	3	1.81E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216095421	3	148649505	G	A	-	-	-	-	-	-	31	0	0	64	14	21.875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.862132353	0.862132353	1	0	0.005	0.995	0	0	0	0	3	2.31E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216096044	3	154970076	T	A	-	-	-	-	-	-	39	0	0	62	20	32.25806452	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.271347249	1.271347249	1	0	0	1	0	0	0	0	3	7.19E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216096406	3	158939021	G	A	IQCJ	CCDS46947.1	r.?	-	-	intronic	33	0	0	67	18	26.86567164	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.0025	0.9975	0	0	0	0	3	2.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216096740	3	162653483	G	A	-	-	-	-	-	-	42	0	0	64	19	29.6875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.170036765	1.170036765	1	0	0	1	0	0	0	0	3	1.34E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216096985	3	164947472	C	A	-	-	-	-	-	-	45	0	0	71	9	12.67605634	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.49958575	0.49958575	1	0.01875	0.34125	0.64	0	0	0	0	3	1.10E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216097165	3	167070592	G	A	ZBBX	CCDS3199.2	r.?	-	-	intronic	36	0	0	82	23	28.04878049	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.105451937	1.105451937	1	0	0	1	0	0	0	0	3	1.19E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216097473	3	170967188	T	A	TNIK	CCDS46956.1	r.?	-	-	intronic	32	0	0	54	17	31.48148148	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.240740741	1.240740741	1	0	0	1	0	0	0	0	3	3.02E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216097512	3	171225796	C	A	-	-	-	-	-	-	34	0	0	54	7	12.96296296	0	0	NA	2	0	0							3	2	1	1	NA	NA	NA	unphased	0.510893246	0.510893246	1	0.01125	0.185	0.80375	0	0	0	0	3	1.13E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216097636	3	172597435	C	A	-	-	-	-	-	-	37	0	0	62	15	24.19354839	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.953510436	0.953510436	1	0	0.00375	0.99625	0	0	0	0	3	2.28E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216097655	3	172768263	C	A	SPATA16	CCDS3221.1	r.?	-	-	intronic	31	0	0	65	17	26.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.030769231	1.030769231	1	0	0	1	0	0	0	0	3	1.14E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216097664	3	172938542	C	A	-	-	-	-	-	-	47	0	0	70	18	25.71428571	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.013445378	1.013445378	1	0	0.00125	0.99875	0	0	0	0	3	6.91E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216097762	3	173950733	G	A	NLGN1	CCDS3222.1	r.?	-	-	intronic	37	0	0	59	12	20.33898305	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.801595214	0.801595214	1	0	0.01125	0.98875	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216098140	3	177803353	G	A	-	-	-	-	-	-	35	0	0	48	7	14.58333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.574754902	0.574754902	1	0.0075	0.09625	0.89625	0	0	0	0	3	4.81E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216098509	3	181044604	T	A	-	-	-	-	-	-	44	0	0	67	20	29.85074627	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.176470588	1.176470588	1	0	0	1	0	0	0	0	3	4.42E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216099418	3	189256230	C	A	-	-	-	-	-	-	52	0	0	81	16	19.75308642	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.976034858	0.976034858	1	0	0.00125	0.99875	0	0	0	0	3	3.77E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216099633	3	190691219	C	A	-	-	-	-	-	-	31	0	0	70	16	22.85714286	158	0	0	131	27	20.61068702							4	3	1	1	NA	NA	NA	unphased	1.129411765	1.129411765	1	0	0.00125	0.99875	0	0	0	0	3	2.93E-22	1	3.41E-35	1	YES	somatic	1_1
1353824	PD9772b	1216099661	3	190943706	G	A	OSTN	CCDS3299.1	r.?	-	-	intronic	50	0	0	77	15	19.48051948	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.962566845	0.962566845	1	0	0.0025	0.9975	0	0	0	0	3	8.05E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216100010	3	193650511	G	A	-	-	-	-	-	-	33	0	0	59	13	22.03389831	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.088733799	1.088733799	1	0	0.0025	0.9975	0	0	0	0	3	3.99E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216100543	3	195931893	C	A	ZDHHC19	CCDS43190.1	r.?	-	-	intronic	47	0	0	51	15	29.41176471	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.453287197	1.453287197	1	0	0	1	0	0	0	0	3	8.22E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216100780	3	197161452	T	A	-	-	-	-	-	-	38	0	0	58	11	18.96551724	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.937119675	0.937119675	1	0	0.00375	0.99625	0	0	0	0	3	8.96E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216101191	4	1392386	G	A	CRIPAK	CCDS3349.1	r.?	-	-	downstream	29	0	0	12	4	33.33333333	0	0	NA	0	0	NA							0.469229117	0	0	0.530770883	1	0	0.469229117	unphased	0.470135196	0.470135196	1	0.03875	0.35125	0.61	0	0	0	0	3	3.00E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216101325	4	2393608	G	A	ZFYVE28	CCDS33942.1	r.?	-	-	intronic	22	0	0	37	11	29.72972973	0	0	NA	0	0	NA							0.469229117	0	0	0.530770883	1	0	0.469229117	unphased	0.419309769	0.89361413	0.469229117	0	0.0025	0.9975	0	0	0	0	3	3.70E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216101387	4	3275580	G	A	-	-	-	-	-	-	33	0	0	53	13	24.52830189	0	0	NA	0	0	NA							0.469229117	0	0	0.530770883	1	0	0.469229117	unphased	0.34594854	0.737269977	0.469229117	0	0.0275	0.9725	0	0	0	0	3	8.53E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216101763	4	5664571	G	A	EVC2	CCDS3382.2	r.?	-	-	intronic	21	0	0	32	10	31.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.231617647	1.231617647	1	0	0.00125	0.99875	0	0	0	0	3	5.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216101864	4	7072512	G	A	GRPEL1	CCDS3396.1	r.?	-	-	upstream	40	0	0	19	6	31.57894737	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.244582043	1.244582043	1	0	0.00375	0.99625	0	0	0	0	3	4.01E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216102965	4	17678831	C	A	FAM184B	CCDS47033.1	r.?	-	-	intronic	45	0	0	46	12	26.08695652	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.028132992	1.028132992	1	0	0.00125	0.99875	0	0	0	0	3	8.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216103314	4	21176014	C	A	KCNIP4	CCDS43217.1	r.?	-	-	intronic	33	0	0	59	14	23.72881356	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.935194417	0.935194417	1	0	0.00125	0.99875	0	0	0	0	3	6.58E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216103406	4	22065440	G	A	-	-	-	-	-	-	55	0	0	67	19	28.35820896	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.117647059	1.117647059	1	0	0	1	0	0	0	0	3	3.67E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216103545	4	23632776	T	A	-	-	-	-	-	-	47	0	0	56	20	35.71428571	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.407563025	1.407563025	1	0	0	1	0	0	0	0	3	6.31E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216103668	4	24641675	T	A	-	-	-	-	-	-	33	0	0	51	12	23.52941176	2	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.00125	0.99875	0	0	0	0	3	3.24E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216103782	4	25850556	T	A	SEL1L3	CCDS47037.1	r.?	-	-	intronic	43	0	0	66	19	28.78787879	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.134581105	1.134581105	1	0	0.00125	0.99875	0	0	0	0	3	2.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216103864	4	26491192	G	A	CCKAR	CCDS3438.1	r.?	-	-	intronic	24	0	0	27	5	18.51851852	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.729847495	0.729847495	1	0.00375	0.0425	0.95375	0	0	0	0	3	2.30E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216103882	4	26626128	G	A	TBC1D19	CCDS3439.1	r.?	-	-	intronic	31	0	0	60	9	15	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.591176471	0.591176471	1	0.00125	0.10375	0.895	0	0	0	0	3	2.29E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216104105	4	28614834	T	A	-	-	-	-	-	-	48	0	0	55	14	25.45454545	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.003208556	1.003208556	1	0	0.00125	0.99875	0	0	0	0	3	2.19E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216104359	4	31179709	C	A	-	-	-	-	-	-	33	0	0	40	11	27.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.083823529	1.083823529	1	0	0.0025	0.9975	0	0	0	0	3	9.88E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216104742	4	34197453	T	A	-	-	-	-	-	-	18	0	0	65	14	21.53846154	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.848868778	0.848868778	1	0	0.00375	0.99625	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216105099	4	37834552	G	A	PGM2	CCDS3443.1	r.?	-	-	intronic	31	0	0	68	18	26.47058824	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.043252595	1.043252595	1	0	0.00125	0.99875	0	0	0	0	3	3.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216105763	4	43051694	G	A	-	-	-	-	-	-	25	0	0	75	15	20	216	0	0	146	20	13.69863014							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	5.25E-20	1	1.06E-22	1	YES	somatic	1_1
1353824	PD9772b	1216106298	4	47373026	G	A	GABRB1	CCDS3474.1	r.?	-	-	intronic	35	0	0	68	9	13.23529412	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	0.653979239	0.653979239	1	0	0.04375	0.95625	0	0	0	0	3	7.38E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216106303	4	47426967	C	A	GABRB1	CCDS3474.1	r.?	-	-	intronic	34	0	0	92	20	21.73913043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.074168798	1.074168798	1	0	0	1	0	0	0	0	3	5.65E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216106329	4	47763844	G	A	CORIN	CCDS3477.1	r.?	-	-	intronic	33	0	0	81	17	20.98765432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.037037037	1.037037037	1	0	0	1	0	0	0	0	3	7.24E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216106437	4	48514190	G	A	FRYL	CCDS43227.1	r.?	-	-	intronic	37	0	0	67	9	13.43283582	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.663740123	0.663740123	1	0.00125	0.0425	0.95625	0	0	0	0	3	6.43E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216111213	4	56602880	G	A	-	-	-	-	-	-	32	0	0	91	18	19.78021978	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.977375566	0.977375566	1	0	0.0025	0.9975	0	0	0	0	3	1.27E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216111216	4	56631207	T	A	-	-	-	-	-	-	50	0	0	66	8	12.12121212	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.598930481	0.598930481	1	0.00625	0.09	0.90375	0	0	0	0	3	1.73E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216111241	4	56909360	T	A	-	-	-	-	-	-	34	0	0	67	11	16.41791045	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.811237928	0.811237928	1	0	0.00875	0.99125	0	0	0	0	3	4.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216111329	4	57344757	G	A	SRP72	CCDS3506.1	r.1489-1g>a	c.768-1G>A	p.?	ess splice	42	0	0	92	17	18.47826087	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.913043478	0.913043478	1	0	0.0025	0.9975	0	0	0	0	3	7.54E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216111432	4	58120472	G	A	-	-	-	-	-	-	26	0	0	77	15	19.48051948	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.962566845	0.962566845	1	0	0.0025	0.9975	0	0	0	0	3	8.05E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216111712	4	60182096	G	A	-	-	-	-	-	-	34	0	0	33	6	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.01	0.99	0	0	0	0	3	1.54E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216112049	4	62796614	C	A	LPHN3	ENST00000512091	r.?	-	-	intronic	43	0	0	72	21	29.16666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.441176471	0.720588235	2	0	0.03125	0.96875	0	0	0	0	3	2.89E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216112151	4	63683376	C	A	-	-	-	-	-	-	42	0	0	70	11	15.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.776470588	0.776470588	1	0	0.02	0.98	0	0	0	0	3	8.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216112152	4	63683378	G	A	-	-	-	-	-	-	42	0	0	68	12	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.005	0.995	0	0	0	0	3	1.37E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216112263	4	64567831	G	A	-	-	-	-	-	-	42	0	0	83	15	18.07228916	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.8929837	0.8929837	1	0	0.00375	0.99625	0	0	0	0	3	2.70E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216112368	4	65352234	G	A	-	-	-	-	-	-	33	0	0	81	15	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.00125	0.99875	0	0	0	0	3	1.82E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216112405	4	65560209	C	A	-	-	-	-	-	-	35	0	0	97	19	19.58762887	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.967859309	0.967859309	1	0	0.0025	0.9975	0	0	0	0	3	9.19E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216112580	4	66888075	T	A	-	-	-	-	-	-	42	0	0	80	15	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.00375	0.99625	0	0	0	0	3	1.49E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216112906	4	69312611	T	A	TMPRSS11E	CCDS33993.1	r.?	-	-	upstream	37	0	0	86	23	26.74418605	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.321477428	1.321477428	1	0	0	1	0	0	0	0	3	4.16E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216112933	4	69539553	C	A	UGT2B15	CCDS3524.1	r.?	-	-	upstream	35	0	0	55	12	21.81818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.078074866	1.078074866	1	0	0	1	0	0	0	0	3	8.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216113022	4	70139283	T	A	-	-	-	-	-	-	57	0	0	100	15	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.02375	0.97625	0	0	0	0	3	5.19E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216113219	4	71303168	G	A	MUC7	CCDS3541.1	r.?	-	-	intronic	30	0	0	17	8	47.05882353	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.325259516	1.162629758	2	0	0	1	0	0	0	0	3	9.12E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216113379	4	72576383	T	A	-	-	-	-	-	-	28	0	0	81	17	20.98765432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.037037037	1.037037037	1	0	0.00125	0.99875	0	0	0	0	3	7.24E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216113412	4	72815483	G	A	-	-	-	-	-	-	26	0	0	88	18	20.45454545	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.010695187	1.010695187	1	0	0.00125	0.99875	0	0	0	0	3	6.62E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216113501	4	73647122	C	A	-	-	-	-	-	-	37	0	0	84	19	22.61904762	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.117647059	1.117647059	1	0	0.0025	0.9975	0	0	0	0	3	4.62E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216113577	4	74100897	C	A	ANKRD17	CCDS34004.1	r.?	-	-	intronic	28	0	0	78	18	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	6.10E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216114031	4	77636641	T	A	SHROOM3	CCDS3579.2	r.?	-	-	intronic	34	0	0	73	15	20.54794521	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.015310234	1.015310234	1	0	0.0025	0.9975	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216114314	4	79516399	C	A	ANXA3	CCDS3584.1	r.?	-	-	intronic	26	0	0	98	26	26.53061224	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.31092437	1.31092437	1	0	0	1	0	0	0	0	3	4.02E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216114390	4	80078183	C	A	-	-	-	-	-	-	26	0	0	83	13	15.6626506	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.773919206	0.773919206	1	0	0.01	0.99	0	0	0	0	3	4.66E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216114575	4	81341960	G	A	C4orf22	CCDS3587.1	r.?	-	-	intronic	32	0	0	79	17	21.51898734	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.063291139	1.063291139	1	0	0	1	0	0	0	0	3	4.55E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216114583	4	81429537	T	A	C4orf22	CCDS3587.1	r.?	-	-	intronic	40	0	0	84	17	20.23809524	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1	1	1	0	0.00125	0.99875	0	0	0	0	3	1.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216114663	4	82111590	G	A	PRKG2	CCDS3589.1	r.?	-	-	intronic	32	0	0	90	16	17.77777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.878431373	0.878431373	1	0	0.00625	0.99375	0	0	0	0	3	2.31E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216114713	4	82642221	G	A	-	-	-	-	-	-	38	0	0	58	12	20.68965517	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.022312373	1.022312373	1	0	0.00375	0.99625	0	0	0	0	3	1.76E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216114812	4	83313328	T	A	-	-	-	-	-	-	28	0	0	57	10	17.54385965	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.866873065	0.866873065	1	0	0.01125	0.98875	0	0	0	0	3	3.40E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216115186	4	86445954	T	A	ARHGAP24	CCDS34025.1	r.?	-	-	intronic	44	0	0	99	13	13.13131313	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.648841355	0.648841355	1	0	0.0725	0.9275	0	0	0	0	3	5.06E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216115219	4	86698787	T	A	ARHGAP24	CCDS34025.1	r.?	-	-	intronic	38	0	0	87	15	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0	0.00125	0.99875	0	0	0	0	3	5.73E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216115557	4	89074473	T	A	ABCG2	CCDS3628.1	r.?	-	-	intronic	20	0	0	72	15	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.0025	0.9975	0	0	0	0	3	2.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216115601	4	89412053	C	A	HERC5	CCDS3630.1	r.?	-	-	intronic	34	0	0	64	15	23.4375	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.158088235	1.158088235	1	0	0.00125	0.99875	0	0	0	0	3	3.87E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216115665	4	89872770	C	A	FAM13A	CCDS34029.1	r.?	-	-	intronic	36	0	0	79	11	13.92405063	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.688011914	0.688011914	1	0.00125	0.0425	0.95625	0	0	0	0	3	3.23E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216115915	4	92103361	C	A	FAM190A	CCDS47099.1	r.?	-	-	intronic	33	0	0	67	14	20.89552239	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.032484636	1.032484636	1	0	0.0025	0.9975	0	0	0	0	3	4.66E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216115979	4	92825146	C	A	-	-	-	-	-	-	27	0	0	80	12	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0.0025	0.0125	0.985	0	0	0	0	3	1.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216116059	4	93939196	T	A	GRID2	CCDS3637.1	r.?	-	-	intronic	34	0	0	67	16	23.88059701	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.179982441	1.179982441	1	0	0	1	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216116131	4	94541928	G	A	GRID2	CCDS3637.1	r.?	-	-	intronic	34	0	0	82	20	24.3902439	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0	1	0	0	0	0	3	4.40E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216116443	4	97242093	C	A	-	-	-	-	-	-	41	0	0	105	29	27.61904762	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.364705882	0.682352941	2	0	0.0825	0.9175	0	0	0	0	3	8.36E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1216116507	4	97672090	T	A	-	-	-	-	-	-	32	0	0	68	16	23.52941176	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0	1	0	0	0	0	3	1.75E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216116525	4	98031033	T	A	-	-	-	-	-	-	32	0	0	52	8	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.03	0.97	0	0	0	0	3	2.42E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216116924	4	101203914	T	A	-	-	-	-	-	-	44	0	0	79	24	30.37974684	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.501116902	0.750558451	2	0	0.01875	0.98125	0	0	0	0	3	5.20E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216117112	4	102556314	G	A	BANK1	ENST00000504592	r.?	-	-	intronic	22	0	0	72	17	23.61111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.166666667	1.166666667	1	0	0	1	0	0	0	0	3	7.97E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216117561	4	105744488	G	A	-	-	-	-	-	-	43	0	0	87	15	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0	0.01125	0.98875	0	0	0	0	3	5.73E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216117614	4	106210846	C	A	-	-	-	-	-	-	34	0	0	15	4	26.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0	0.00875	0.99125	0	0	0	0	3	8.16E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216117674	4	106568680	C	A	ENSG00000236699	ENST00000420470	r.?	-	-	intronic	51	0	0	66	16	24.24242424	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.197860963	1.197860963	1	0	0.00125	0.99875	0	0	0	0	3	1.03E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216117725	4	106948723	C	A	-	-	-	-	-	-	41	0	0	76	12	15.78947368	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.780185759	0.780185759	1	0	0.01125	0.98875	0	0	0	0	3	5.63E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216117757	4	107336852	G	A	-	-	-	-	-	-	45	0	0	72	14	19.44444444	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.960784314	0.960784314	1	0	0	1	0	0	0	0	3	1.39E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216117766	4	107436850	C	A	-	-	-	-	-	-	29	0	0	77	15	19.48051948	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.962566845	0.962566845	1	0	0.00125	0.99875	0	0	0	0	3	8.05E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216117820	4	107916203	T	A	DKK2	CCDS3675.1	r.?	-	-	intronic	37	0	0	83	13	15.6626506	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.773919206	0.773919206	1	0.00125	0.01125	0.9875	0	0	0	0	3	4.66E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216118022	4	109532486	T	A	-	-	-	-	-	-	32	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0.00125	0.99875	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216118103	4	109963922	C	A	COL25A1	CCDS43258.1	r.?	-	-	intronic	25	0	0	69	10	14.49275362	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.716112532	0.716112532	1	0.00125	0.03125	0.9675	0	0	0	0	3	2.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216118310	4	111379291	C	A	-	-	-	-	-	-	38	0	0	36	6	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0.0025	0.02	0.9775	0	0	0	0	3	2.68E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216118478	4	112761847	G	A	-	-	-	-	-	-	41	0	0	63	6	9.523809524	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.470588235	0.470588235	1	0.03	0.24375	0.72625	0	0	0	0	3	8.32E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216118678	4	114289877	T	A	ANK2	CCDS3702.1	r.?	-	-	intronic	45	0	0	98	15	15.30612245	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.756302521	0.756302521	1	0	0.01375	0.98625	0	0	0	0	3	3.78E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216119006	4	116756980	T	A	-	-	-	-	-	-	43	0	0	90	19	21.11111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.043137255	1.043137255	1	0	0	1	0	0	0	0	3	1.95E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216119059	4	117152213	C	A	-	-	-	-	-	-	37	0	0	91	19	20.87912088	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.031674208	1.031674208	1	0	0	1	0	0	0	0	3	2.46E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216119076	4	117380223	T	A	-	-	-	-	-	-	39	0	0	79	13	16.4556962	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.813104989	0.813104989	1	0	0.0125	0.9875	0	0	0	0	3	2.37E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216119191	4	118136818	C	A	-	-	-	-	-	-	39	0	0	82	15	18.29268293	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.903873745	0.903873745	1	0	0.00625	0.99375	0	0	0	0	3	2.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216119222	4	118358339	G	A	-	-	-	-	-	-	32	0	0	81	20	24.69135802	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.220043573	1.220043573	1	0	0	1	0	0	0	0	3	3.35E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216119328	4	119207123	G	A	PRSS12	CCDS3709.1	r.?	-	-	intronic	49	0	0	93	14	15.05376344	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.743833017	0.743833017	1	0	0.0275	0.9725	0	0	0	0	3	6.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216119493	4	120276660	C	A	-	-	-	-	-	-	21	0	0	87	17	19.54022989	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.965517241	0.965517241	1	0	0	1	0	0	0	0	3	2.71E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216119509	4	120337136	G	A	-	-	-	-	-	-	20	0	0	35	9	25.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.270588235	1.270588235	1	0	0.0025	0.9975	0	0	0	0	3	1.23E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216119663	4	121710910	C	A	PRDM5	CCDS3716.1	r.?	-	-	intronic	34	0	0	72	8	11.11111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.549019608	0.549019608	1	0.00625	0.16375	0.83	0	0	0	0	3	3.52E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216119797	4	122797290	G	A	TRPC3	CCDS3725.1	r.?	-	-	downstream	25	0	0	36	15	41.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.058823529	1.029411765	2	0	0.00125	0.99875	0	0	0	0	3	1.54E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216119810	4	122890087	C	A	-	-	-	-	-	-	35	0	0	77	8	10.38961039	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.513368984	0.513368984	1	0.015	0.225	0.76	0	0	0	0	3	6.05E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216119831	4	123006484	G	A	-	-	-	-	-	-	29	0	0	76	13	17.10526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.845201238	0.845201238	1	0	0.0075	0.9925	0	0	0	0	3	1.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216119964	4	124087279	G	A	SPATA5	CCDS3730.1	r.?	-	-	intronic	35	0	0	83	13	15.6626506	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.773919206	0.773919206	1	0	0.00875	0.99125	0	0	0	0	3	4.66E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216120123	4	125348608	G	A	-	-	-	-	-	-	38	0	0	68	17	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.00125	0.99875	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216120184	4	125843301	T	A	-	-	-	-	-	-	22	0	0	80	14	17.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.864705882	0.864705882	1	0	0.00625	0.99375	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216120243	4	126443052	T	A	-	-	-	-	-	-	41	0	0	84	18	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	2.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216120651	4	130001073	T	A	SCLT1	CCDS3740.1	r.?	-	-	intronic	35	0	0	33	6	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.01375	0.98625	0	0	0	0	3	1.54E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216120874	4	131789023	C	A	-	-	-	-	-	-	25	0	0	41	6	14.63414634	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.723098996	0.723098996	1	0.0025	0.01875	0.97875	0	0	0	0	3	6.05E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216120888	4	131968329	C	A	-	-	-	-	-	-	31	0	0	81	18	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	1.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216120958	4	132401322	C	A	-	-	-	-	-	-	51	0	0	80	24	30	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.482352941	0.741176471	2	0	0.01	0.99	0	0	0	0	3	7.39E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216121252	4	133324773	C	A	-	-	-	-	-	-	37	0	0	76	14	18.42105263	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.910216718	0.910216718	1	0	0.00125	0.99875	0	0	0	0	3	3.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216121394	4	134469926	G	A	-	-	-	-	-	-	32	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0	1	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216121400	4	134570366	T	A	-	-	-	-	-	-	34	0	0	75	10	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0	0.0575	0.9425	0	0	0	0	3	6.02E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216121422	4	134675463	C	A	-	-	-	-	-	-	35	0	0	78	22	28.20512821	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.393665158	1.393665158	1	0	0	1	0	0	0	0	3	2.58E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216121434	4	134841564	G	A	-	-	-	-	-	-	39	0	0	74	16	21.62162162	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06836248	1.06836248	1	0	0	1	0	0	0	0	3	7.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216121687	4	136768021	G	A	-	-	-	-	-	-	38	0	0	89	28	31.46067416	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.554527429	0.777263714	2	0	0.01	0.99	0	0	0	0	3	2.96E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1216121732	4	137313126	G	A	-	-	-	-	-	-	38	0	0	87	19	21.83908046	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.079107505	1.079107505	1	0	0	1	0	0	0	0	3	9.64E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216121836	4	138298041	G	A	-	-	-	-	-	-	27	0	0	62	20	32.25806452	107	0	0	99	9	9.090909091							4	2	2	1	NA	NA	NA	unphased	1.593927894	0.796963947	2	0	0.00625	0.99375	0	0	0	0	3	7.19E-31	1	2.25E-09	1	YES	somatic	1_1
1353824	PD9772b	1216122312	4	141722652	G	A	-	-	-	-	-	-	30	0	0	52	11	21.15384615	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.045248869	1.045248869	1	0	0.0025	0.9975	0	0	0	0	3	2.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216122556	4	143750506	G	A	INPP4B	CCDS47112.1	r.?	-	-	intronic	34	0	0	69	15	21.73913043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.074168798	1.074168798	1	0	0.00125	0.99875	0	0	0	0	3	1.34E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216122845	4	145312442	T	A	-	-	-	-	-	-	28	0	0	65	19	29.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.444343891	0.722171946	2	0	0.01625	0.98375	0	0	0	0	3	1.89E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216122890	4	145711166	G	A	-	-	-	-	-	-	34	0	0	80	14	17.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.864705882	0.864705882	1	0	0.00375	0.99625	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216123036	4	146989167	C	A	-	-	-	-	-	-	22	0	0	45	4	8.888888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.439215686	0.439215686	1	0.01625	0.1625	0.82125	0	0	0	0	3	7.91E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216123224	4	148280483	G	A	-	-	-	-	-	-	35	0	0	75	16	21.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.054117647	1.054117647	1	0	0	1	0	0	0	0	3	9.88E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216123497	4	150320999	G	A	-	-	-	-	-	-	34	0	0	82	16	19.51219512	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.964131994	0.964131994	1	0	0.00125	0.99875	0	0	0	0	3	4.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216123508	4	150413746	G	A	-	-	-	-	-	-	28	0	0	73	15	20.54794521	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.015310234	1.015310234	1	0	0	1	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216124193	4	156235351	C	A	-	-	-	-	-	-	38	0	0	79	14	17.72151899	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.875651526	0.875651526	1	0	0.01	0.99	0	0	0	0	3	5.60E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216124762	4	160531149	T	A	-	-	-	-	-	-	41	0	0	75	14	18.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0.0025	0.9975	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216125023	4	162269417	C	A	-	-	-	-	-	-	49	0	0	75	12	16	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0	0.01125	0.98875	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216125129	4	163101053	T	A	-	-	-	-	-	-	21	0	0	54	17	31.48148148	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.555555556	0.777777778	2	0	0.01	0.99	0	0	0	0	3	3.02E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216125211	4	163604833	G	A	-	-	-	-	-	-	33	0	0	77	19	24.67532468	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.219251337	1.219251337	1	0	0	1	0	0	0	0	3	7.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216125423	4	164965291	T	A	Mar-01	CCDS45732.1	r.?	-	-	intronic	35	0	0	61	15	24.59016393	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.215043394	1.215043394	1	0	0	1	0	0	0	0	3	1.73E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216125735	4	167416390	T	A	-	-	-	-	-	-	32	0	0	63	16	25.3968254	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.000933707	1.000933707	1	0	0	1	0	0	0	0	3	4.48E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216126076	4	170245331	G	A	-	-	-	-	-	-	34	0	0	78	18	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	6.10E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216126337	4	172134039	T	A	-	-	-	-	-	-	33	0	0	96	21	21.875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.080882353	1.080882353	1	0	0	1	0	0	0	0	3	2.61E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216126344	4	172224582	C	A	-	-	-	-	-	-	22	0	0	37	5	13.51351351	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.66772655	0.66772655	1	0.0025	0.04625	0.95125	0	0	0	0	3	1.19E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216126351	4	172253628	C	A	-	-	-	-	-	-	40	0	0	84	13	15.47619048	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.01625	0.98375	0	0	0	0	3	5.49E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216126360	4	172320352	G	A	-	-	-	-	-	-	36	0	0	89	16	17.97752809	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.888301388	0.888301388	1	0	0.0025	0.9975	0	0	0	0	3	1.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216126491	4	173336772	T	A	GALNTL6	CCDS34104.1	r.?	-	-	intronic	31	0	0	53	10	18.86792453	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.932297447	0.932297447	1	0	0.0025	0.9975	0	0	0	0	3	1.57E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216126512	4	173419101	G	A	GALNTL6	CCDS34104.1	r.?	-	-	intronic	23	0	0	28	5	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.0175	0.9825	0	0	0	0	3	2.79E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216126698	4	174882045	T	A	-	-	-	-	-	-	35	0	0	62	17	27.41935484	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	1.35483871	1.35483871	1	0	0	1	0	0	0	0	3	4.56E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216127233	4	178867336	T	A	ENSG00000231171	ENST00000507870	r.?	-	-	intronic	36	0	0	97	16	16.49484536	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.815039418	0.815039418	1	0	0.00875	0.99125	0	0	0	0	3	8.26E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216127265	4	179085982	T	A	-	-	-	-	-	-	32	0	0	66	20	30.3030303	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.497326203	0.748663102	2	0	0.0125	0.9875	0	0	0	0	3	3.11E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216127296	4	179381323	G	A	-	-	-	-	-	-	31	0	0	72	12	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.0025	0.9975	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216127331	4	179658137	C	A	-	-	-	-	-	-	43	0	0	66	10	15.15151515	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.748663102	0.748663102	1	0	0.02875	0.97125	0	0	0	0	3	1.60E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216127360	4	180027500	T	A	-	-	-	-	-	-	37	0	0	79	18	22.78481013	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.125837677	1.125837677	1	0	0	1	0	0	0	0	3	7.86E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216127722	4	182208890	G	A	-	-	-	-	-	-	37	0	0	98	28	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	0.705882353	2	0	0.04	0.96	0	0	0	0	3	6.85E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1216127737	4	182288058	G	A	-	-	-	-	-	-	32	0	0	99	20	20.2020202	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.998217469	0.998217469	1	0	0	1	0	0	0	0	3	2.81E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216127815	4	182888707	C	A	-	-	-	-	-	-	32	0	0	64	6	9.375	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.463235294	0.463235294	1	0.02125	0.2525	0.72625	0	0	0	0	3	9.14E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216127816	4	182888708	C	A	-	-	-	-	-	-	32	0	0	63	6	9.523809524	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.470588235	0.470588235	1	0.015	0.23625	0.74875	0	0	0	0	3	8.32E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216127888	4	183413421	T	A	ODZ3	CCDS47165.1	r.?	-	-	intronic	37	0	0	65	14	21.53846154	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.064253394	1.064253394	1	0	0.00125	0.99875	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216128471	4	187322745	C	A	-	-	-	-	-	-	33	0	0	77	13	16.88311688	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.834224599	0.834224599	1	0	0.00375	0.99625	0	0	0	0	3	1.67E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216131862	5	545613	G	A	-	-	-	-	-	-	52	0	0	32	7	21.875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.862132353	0.862132353	1	0	0.0125	0.9875	0	0	0	0	3	2.36E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216132591	5	3940150	G	A	-	-	-	-	-	-	37	0	0	89	37	41.57303371	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.638466623	0.819233311	2	0	0	1	0	0	0	0	3	8.39E-61	1	1	1	NA	NA	NA
1353824	PD9772b	1216133431	5	9026997	G	A	-	-	-	-	-	-	30	0	0	79	23	29.11392405	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.438570365	0.719285182	2	0	0.02	0.98	0	0	0	0	3	4.43E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216133483	5	9444038	G	A	SEMA5A	CCDS3875.1	r.?	-	-	intronic	37	0	0	58	12	20.68965517	240	1	0.416666667	446	60	13.4529148							4	2	2	1	NA	NA	NA	unphased	1.022312373	1.022312373	1	0	0.0025	0.9975	0	0	0	0	3	1.76E-16	1	2.22E-64	0.699711031	YES	somatic	1_1
1353824	PD9772b	1216133855	5	12928309	T	A	-	-	-	-	-	-	29	0	0	56	9	16.07142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.633403361	0.633403361	1	0.0025	0.0725	0.925	0	0	0	0	3	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216134151	5	16535733	G	A	FAM134B	CCDS43304.1	r.?	-	-	intronic	31	1	3.225806452	8	3	37.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.477941176	1.477941176	1	0	0.01375	0.98625	0	0	0	0	3	6.87E-06	0.143917729	1	1	NA	NA	NA
1353824	PD9772b	1216134336	5	17866932	G	A	-	-	-	-	-	-	31	0	0	59	12	20.33898305	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.004985045	1.004985045	1	0	0.00125	0.99875	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216134481	5	18568598	G	A	-	-	-	-	-	-	34	0	0	88	15	17.04545455	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.842245989	0.842245989	1	0	0.01375	0.98625	0	0	0	0	3	6.87E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216134746	5	20730091	G	A	-	-	-	-	-	-	37	0	0	93	13	13.97849462	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.690702087	0.690702087	1	0	0.02625	0.97375	0	0	0	0	3	2.18E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216134791	5	20849875	C	A	-	-	-	-	-	-	36	0	0	65	13	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00375	0.99625	0	0	0	0	3	1.57E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216135036	5	21663933	G	A	-	-	-	-	-	-	25	0	0	58	10	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0.00125	0.01625	0.9825	0	0	0	0	3	4.10E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216135159	5	22344844	G	A	CDH12	CCDS3890.1	r.?	-	-	intronic	36	0	0	87	21	24.13793103	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.192697769	1.192697769	1	0	0	1	0	0	0	0	3	2.64E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216135282	5	23420164	G	A	-	-	-	-	-	-	46	0	0	88	20	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0	1	0	0	0	0	3	2.12E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216135391	5	24178982	C	A	-	-	-	-	-	-	42	0	0	83	17	20.48192771	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.012048193	1.012048193	1	0	0.00125	0.99875	0	0	0	0	3	1.14E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216135607	5	25730203	C	A	-	-	-	-	-	-	45	0	0	87	22	25.28735632	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.249492901	1.249492901	1	0	0	1	0	0	0	0	3	3.97E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216135761	5	27005307	C	A	CDH9	CCDS3893.1	r.?	-	-	intronic	44	0	0	79	17	21.51898734	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.063291139	1.063291139	1	0	0	1	0	0	0	0	3	4.55E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216136049	5	29249785	G	A	-	-	-	-	-	-	30	0	0	78	15	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0.0025	0.9975	0	0	0	0	3	9.92E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216136160	5	29707859	T	A	-	-	-	-	-	-	30	0	0	75	14	18.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0	1	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216136242	5	30270785	G	A	-	-	-	-	-	-	30	0	0	27	8	29.62962963	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.464052288	1.464052288	1	0	0.00125	0.99875	0	0	0	0	3	7.97E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216136258	5	30390622	G	A	-	-	-	-	-	-	35	0	0	81	20	24.69135802	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.220043573	1.220043573	1	0	0	1	0	0	0	0	3	3.35E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216136364	5	31153264	G	A	-	-	-	-	-	-	32	0	0	90	20	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	3.48E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216136457	5	31701775	G	A	PDZD2	CCDS34137.1	r.?	-	-	intronic	33	0	0	51	14	27.45098039	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.356401384	1.356401384	1	0	0	1	0	0	0	0	3	6.64E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216137394	5	38124278	C	A	-	-	-	-	-	-	38	0	0	55	10	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.01	0.99	0	0	0	0	3	2.33E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216137753	5	40568075	C	A	-	-	-	-	-	-	28	0	0	85	6	7.058823529	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.348788927	0.348788927	1	0.1425	0.6575	0.2	0	0	0	0	2	4.87E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216138131	5	44169456	G	A	-	-	-	-	-	-	28	0	0	70	18	25.71428571	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.013445378	1.013445378	1	0	0.0025	0.9975	0	0	0	0	3	6.91E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216139578	5	51765190	T	A	-	-	-	-	-	-	39	0	0	66	17	25.75757576	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.015151515	1.015151515	1	0	0.005	0.995	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216139694	5	52655196	G	A	-	-	-	-	-	-	33	0	0	70	22	31.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.238655462	1.238655462	1	0	0	1	0	0	0	0	3	1.63E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216139714	5	52909837	T	A	NDUFS4	CCDS3960.1	r.?	-	-	intronic	37	0	0	60	13	21.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.853921569	0.853921569	1	0	0.00625	0.99375	0	0	0	0	3	5.07E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216140031	5	56110258	C	A	MAP3K1	CCDS43318.1	r.?	-	-	upstream	28	0	0	21	5	23.80952381	0	0	NA	2	2	100							3	2	1	1	NA	NA	NA	unphased	0.93837535	0.93837535	1	0	0.01125	0.98875	0	0	0	0	3	5.95E-08	1	2.50E-05	1	NA	NA	NA
1353824	PD9772b	1216140141	5	57365947	T	A	-	-	-	-	-	-	28	0	0	69	23	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	1.15E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216140735	5	63778122	T	A	-	-	-	-	-	-	37	0	0	72	5	6.944444444	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.27369281	0.27369281	1	0.30125	0.63875	0.06	0	0	0	0	2	3.31E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216141098	5	67154981	C	A	-	-	-	-	-	-	29	0	0	50	15	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0	1	0	0	0	0	3	5.83E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216141262	5	68663642	G	A	RAD17	CCDS4004.1	r.?	-	-	upstream	28	0	0	31	7	22.58064516	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.889943074	0.889943074	1	0	0.01625	0.98375	0	0	0	0	3	1.85E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216141342	5	70435775	T	A	-	-	-	-	-	-	25	1	4	24	9	37.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.477941176	1.477941176	1	0	0	1	0	0	0	0	3	2.39E-15	0.117779757	1	1	NA	NA	NA
1353824	PD9772b	1216141543	5	72443309	C	A	-	-	-	-	-	-	38	0	0	45	4	8.888888889	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.350326797	0.350326797	1	0.07875	0.425	0.49625	0	0	0	0	3	7.91E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216141682	5	73842533	C	A	-	-	-	-	-	-	39	0	0	34	9	26.47058824	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.043252595	1.043252595	1	0	0.00625	0.99375	0	0	0	0	3	9.15E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216141790	5	74965156	G	A	C5orf37	CCDS47236.1	r.?	-	-	downstream	37	0	0	72	20	27.77777778	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.094771242	1.094771242	1	0	0.00125	0.99875	0	0	0	0	3	2.32E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216142061	5	77270517	G	A	-	-	-	-	-	-	29	0	0	62	18	29.03225806	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.144212524	1.144212524	1	0	0	1	0	0	0	0	3	5.72E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216142760	5	83739989	C	A	-	-	-	-	-	-	41	0	0	41	5	12.19512195	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.480631277	0.480631277	1	0.015	0.17	0.815	0	0	0	0	3	2.02E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216142875	5	84668693	T	A	-	-	-	-	-	-	30	0	0	61	12	19.67213115	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.775313404	0.775313404	1	0	0.01	0.99	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216143237	5	88547961	G	A	-	-	-	-	-	-	34	0	0	69	20	28.98550725	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.142369991	1.142369991	1	0	0	1	0	0	0	0	3	8.73E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216143456	5	90733974	T	A	-	-	-	-	-	-	33	0	0	95	26	27.36842105	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.352321981	1.352321981	1	0	0	1	0	0	0	0	3	1.60E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216143599	5	92295145	T	A	-	-	-	-	-	-	40	0	0	76	16	21.05263158	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.829721362	0.829721362	1	0	0.00625	0.99375	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216144015	5	96672030	T	A	-	-	-	-	-	-	39	0	0	20	4	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0.0025	0.02125	0.97625	0	0	0	0	3	2.84E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216144068	5	97079126	G	A	-	-	-	-	-	-	31	0	0	38	6	15.78947368	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.622291022	0.622291022	1	0.00375	0.06375	0.9325	0	0	0	0	3	3.76E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216144821	5	104171580	G	A	ENSG00000232402	ENST00000438939	r.?	-	-	intronic	37	0	0	42	12	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	2.35E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216144974	5	105829698	T	A	-	-	-	-	-	-	49	0	0	51	8	15.68627451	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.61822376	0.61822376	1	0.0025	0.085	0.9125	0	0	0	0	3	2.05E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216145043	5	106410475	C	A	-	-	-	-	-	-	34	0	0	62	10	16.12903226	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.635673624	0.635673624	1	0.00375	0.075	0.92125	0	0	0	0	3	8.29E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216145596	5	111830652	T	A	-	-	-	-	-	-	43	0	0	36	4	11.11111111	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.437908497	0.437908497	1	0.02375	0.185	0.79125	0	0	0	0	3	3.24E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216145635	5	112233900	G	A	REEP5	CCDS4109.2	r.?	-	-	intronic	30	0	0	56	16	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0.00125	0.99875	0	0	0	0	3	5.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216145654	5	112445801	C	A	MCC	CCDS4111.1	r.?	-	-	intronic	28	0	0	60	19	31.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.248039216	1.248039216	1	0	0	1	0	0	0	0	3	3.21E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216146178	5	118361281	C	A	-	-	-	-	-	-	56	0	0	60	16	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0	1	0	0	0	0	3	1.86E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216146294	5	119819370	T	A	PRR16	CCDS4127.1	r.?	-	-	intronic	50	0	0	62	18	29.03225806	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.144212524	1.144212524	1	0	0	1	0	0	0	0	3	5.72E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216146395	5	120864869	G	A	-	-	-	-	-	-	44	0	0	58	22	37.93103448	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.494929006	0.747464503	2	0	0.01125	0.98875	0	0	0	0	3	1.13E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216146796	5	125347642	T	A	-	-	-	-	-	-	38	0	0	27	5	18.51851852	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.729847495	0.729847495	1	0.00125	0.0275	0.97125	0	0	0	0	3	2.30E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216146838	5	125691289	G	A	GRAMD3	ENST00000513040	r.?	-	-	upstream	39	0	0	68	16	23.52941176	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.005	0.995	0	0	0	0	3	1.75E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216147088	5	127798955	G	A	FBN2	CCDS34222.1	r.?	-	-	intronic	32	0	0	68	17	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216147395	5	131014588	T	A	FNIP1	CCDS34226.1	r.?	-	-	intronic	43	0	0	45	14	31.11111111	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.226143791	1.226143791	1	0	0	1	0	0	0	0	3	8.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216147531	5	132925136	C	A	FSTL4	CCDS34238.1	r.?	-	-	intronic	37	0	0	30	11	36.66666667	276	0	0	74	5	6.756756757							3	2	1	1	NA	NA	NA	unphased	1.445098039	1.445098039	1	0	0.00125	0.99875	0	0	0	0	3	2.44E-18	1	3.78E-05	1	YES	somatic	1_1
1353824	PD9772b	1216147532	5	132925137	T	A	FSTL4	CCDS34238.1	r.?	-	-	intronic	38	0	0	31	11	35.48387097	275	2	0.727272727	74	5	6.756756757							3	2	1	1	NA	NA	NA	unphased	1.398481973	1.398481973	1	0	0	1	0	0	0	0	3	3.77E-18	1	3.78E-05	0.399832505	YES	somatic	1_1
1353824	PD9772b	1216147547	5	133212157	G	A	-	-	-	-	-	-	41	0	0	26	11	42.30769231	0	0	NA	2	0	0							3	2	1	1	NA	NA	NA	unphased	1.667420814	0.833710407	2	0	0.01125	0.98875	0	0	0	0	3	3.52E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216147659	5	134616329	C	A	-	-	-	-	-	-	33	0	0	47	7	14.89361702	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.58698373	0.58698373	1	0.00125	0.0825	0.91625	0	0	0	0	3	4.12E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216147690	5	135059228	C	A	-	-	-	-	-	-	24	0	0	37	5	13.51351351	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.532591415	0.532591415	1	0.01	0.09875	0.89125	0	0	0	0	3	1.19E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216147727	5	135535060	C	A	-	-	-	-	-	-	43	0	0	21	4	19.04761905	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.75070028	0.75070028	1	0.00125	0.0275	0.97125	0	0	0	0	3	3.49E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216148677	5	146718289	C	A	STK32A	CCDS47299.1	r.?	-	-	intronic	46	0	0	62	16	25.80645161	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.017077799	1.017077799	1	0	0	1	0	0	0	0	3	3.36E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216148686	5	146872944	T	A	DPYSL3	ENST00000343218	r.?	-	-	intronic	41	0	0	61	13	21.31147541	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.839922854	0.839922854	1	0	0.0025	0.9975	0	0	0	0	3	6.41E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216148836	5	148249887	G	A	-	-	-	-	-	-	49	0	0	66	9	13.63636364	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.537433155	0.537433155	1	0.00875	0.22875	0.7625	0	0	0	0	3	5.59E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216149325	5	153640100	G	A	GALNT10	CCDS4325.1	r.?	-	-	intronic	47	0	0	66	19	28.78787879	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.134581105	1.134581105	1	0	0	1	0	0	0	0	3	2.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216149393	5	154435494	T	A	-	-	-	-	-	-	27	0	0	48	4	8.333333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.328431373	0.328431373	1	0.13375	0.4775	0.38875	0	0	0	0	2	0.000102016	1	1	1	NA	NA	NA
1353824	PD9772b	1216149581	5	156652922	C	A	ITK	CCDS4336.1	r.?	-	-	intronic	42	0	0	78	20	25.64102564	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.010558069	1.010558069	1	0	0.00125	0.99875	0	0	0	0	3	1.43E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216149684	5	157689890	G	A	-	-	-	-	-	-	33	0	0	50	12	24	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.945882353	0.945882353	1	0	0.0075	0.9925	0	0	0	0	3	2.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216149823	5	158940446	C	A	-	-	-	-	-	-	37	0	0	54	8	14.81481481	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.583877996	0.583877996	1	0.00375	0.1125	0.88375	0	0	0	0	3	3.31E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216150054	5	161378833	G	A	-	-	-	-	-	-	31	0	0	65	23	35.38461538	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.394570136	0.697285068	2	0	0.03625	0.96375	0	0	0	0	3	2.21E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216150147	5	162219900	T	A	-	-	-	-	-	-	29	0	0	46	10	21.73913043	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.856777494	0.856777494	1	0	0.00625	0.99375	0	0	0	0	3	3.38E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216150238	5	162879107	C	A	NUDCD2	CCDS4361.1	r.?	-	-	downstream	41	0	0	38	12	31.57894737	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.244582043	1.244582043	1	0	0.0025	0.9975	0	0	0	0	3	5.86E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216150516	5	165789774	G	A	-	-	-	-	-	-	25	0	0	58	9	15.51724138	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.611561866	0.611561866	1	0.00375	0.08375	0.9125	0	0	0	0	3	1.67E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216150924	5	170121685	G	A	KCNIP1	CCDS4374.1	r.?	-	-	intronic	28	0	0	72	22	30.55555556	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.204248366	1.204248366	1	0	0	1	0	0	0	0	3	3.36E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216150984	5	170699936	C	A	RANBP17	CCDS34287.1	r.?	-	-	intronic	45	0	0	63	7	11.11111111	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.437908497	0.437908497	1	0.045	0.4375	0.5175	0	0	0	0	3	3.38E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216151198	5	172847526	G	A	-	-	-	-	-	-	32	0	0	43	9	20.93023256	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.824897401	0.824897401	1	0	0.01875	0.98125	0	0	0	0	3	9.45E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216152004	6	329577	T	A	DUSP22	CCDS4468.1	r.?	-	-	intronic	55	0	0	109	11	10.09174312	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.498650836	0.498650836	1	0.01875	0.44	0.54125	0	0	0	0	3	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216152297	6	2203262	T	A	GMDS	CCDS4474.1	r.?	-	-	intronic	43	0	0	83	22	26.5060241	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.309709426	1.309709426	1	0	0	1	0	0	0	0	3	1.23E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216152489	6	3832750	C	A	-	-	-	-	-	-	46	0	0	39	20	51.28205128	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.533936652	0.844645551	3	0	0.00375	0.99625	0	0	0	0	3	6.00E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216152960	6	6889485	C	A	-	-	-	-	-	-	41	0	0	17	3	17.64705882	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0.00375	0.0275	0.96875	0	0	0	0	3	8.07E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216153055	6	7497250	T	A	-	-	-	-	-	-	32	0	0	67	6	8.955223881	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.442493415	0.442493415	1	0.03875	0.3125	0.64875	0	0	0	0	3	1.20E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216153163	6	8158217	G	A	-	-	-	-	-	-	45	0	0	70	35	50	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.470588235	0.823529412	3	0	0.00125	0.99875	0	0	0	0	3	2.75E-61	1	1	1	NA	NA	NA
1353824	PD9772b	1216153361	6	9512636	T	A	-	-	-	-	-	-	44	0	0	97	16	16.49484536	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.815039418	0.815039418	1	0	0.005	0.995	0	0	0	0	3	8.26E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216153362	6	9512637	C	A	-	-	-	-	-	-	44	0	0	97	16	16.49484536	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.815039418	0.815039418	1	0	0.00625	0.99375	0	0	0	0	3	8.26E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216153402	6	9818632	T	A	OFCC1	ENST00000460363	r.?	-	-	intronic	36	0	0	73	31	42.46575342	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.098307816	1.049153908	2	0	0	1	0	0	0	0	3	1.47E-51	1	1	1	NA	NA	NA
1353824	PD9772b	1216153709	6	11855000	C	A	-	-	-	-	-	-	32	0	0	67	33	49.25373134	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.433713784	0.811237928	3	0	0	1	0	0	0	0	3	1.40E-57	1	1	1	NA	NA	NA
1353824	PD9772b	1216153780	6	12208707	T	A	-	-	-	-	-	-	27	0	0	76	29	38.15789474	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.885448916	0.942724458	2	0	0	1	0	0	0	0	3	1.22E-46	1	1	1	NA	NA	NA
1353824	PD9772b	1216153984	6	13491565	G	A	GFOD1	CCDS4524.1	r.?	-	-	upstream	38	0	0	75	30	40	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.976470588	0.988235294	2	0	0	1	0	0	0	0	3	5.85E-49	1	1	1	NA	NA	NA
1353824	PD9772b	1216154002	6	13637901	G	A	RANBP9	CCDS4529.1	r.?	-	-	intronic	32	0	0	83	33	39.75903614	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.964564139	0.982282069	2	0	0	1	0	0	0	0	3	1.36E-53	1	1	1	NA	NA	NA
1353824	PD9772b	1216154393	6	17424371	G	A	CAP2	CCDS4539.1	r.?	-	-	intronic	34	0	0	19	7	36.84210526	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.452012384	1.452012384	1	0	0.00125	0.99875	0	0	0	0	3	3.73E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216154475	6	18299716	C	A	-	-	-	-	-	-	46	0	0	45	12	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0	1	0	0	0	0	3	6.03E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216154649	6	19874578	C	A	-	-	-	-	-	-	27	0	0	40	9	22.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.886764706	0.886764706	1	0	0.0075	0.9925	0	0	0	0	3	4.64E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216155060	6	23971495	C	A	-	-	-	-	-	-	41	0	0	52	14	26.92307692	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.061085973	1.061085973	1	0	0.0025	0.9975	0	0	0	0	3	9.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216155877	6	30341187	G	A	-	-	-	-	-	-	40	0	0	89	21	23.59550562	0	0	NA	0	0	NA							2.070786367	1	1	0.929213633	2	1	0.070786367	unphased	0.710687861	0.710687861	1	0	0.04	0.96	0	0	0	0	3	4.49E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216155963	6	31018725	G	A	-	-	-	-	-	-	28	0	0	60	13	21.66666667	0	0	NA	0	0	NA							2.070786367	1	1	0.929213633	2	1	0.070786367	unphased	0.652591948	0.652591948	1	0	0.06875	0.93125	0	0	0	0	3	5.07E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216156184	6	32345382	T	A	-	-	-	-	-	-	32	0	0	71	16	22.53521127	0	0	NA	0	0	NA							2.166606176	1	1	0.833393824	2	1	0.166606176	unphased	0.700345385	0.700345385	1	0	0.0375	0.9625	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216156321	6	32659437	G	A	-	-	-	-	-	-	28	0	0	51	12	23.52941176	0	0	NA	0	0	NA							2.166606176	1	1	0.833393824	2	1	0.166606176	unphased	0.731242976	0.731242976	1	0	0.02375	0.97625	0	0	0	0	3	3.24E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216156544	6	34142246	C	A	-	-	-	-	-	-	38	0	0	27	5	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.01	0.99	0	0	0	0	3	2.30E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216156873	6	36707539	C	A	CPNE5	CCDS4825.1	r.?	-	-	downstream	33	0	0	31	7	22.58064516	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.115749526	1.115749526	1	0	0.00375	0.99625	0	0	0	0	3	1.85E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216156914	6	37098957	G	A	-	-	-	-	-	-	23	0	0	21	7	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	1.647058824	1	0	0	1	0	0	0	0	3	8.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216157246	6	39775447	T	A	DAAM2	ENST00000398904	r.?	-	-	intronic	25	0	0	61	13	21.31147541	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	1.053037608	1.053037608	1	0	0.00125	0.99875	0	0	0	0	3	6.41E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216157266	6	39994516	T	A	-	-	-	-	-	-	43	0	0	65	11	16.92307692	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.836199095	0.836199095	1	0	0.01	0.99	0	0	0	0	3	3.41E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216157303	6	40305661	T	A	-	-	-	-	-	-	27	0	0	48	11	22.91666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.132352941	1.132352941	1	0	0.0025	0.9975	0	0	0	0	3	9.31E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216157581	6	42856256	T	A	RPL7L1	CCDS4873.1	r.3098u>a	c.?	p.?	3'UTR variant	38	0	0	63	9	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.0025	0.02625	0.97125	0	0	0	0	3	3.62E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216157629	6	43309050	C	A	ZNF318	CCDS4895.2	r.?	-	-	intronic	29	0	0	50	12	24	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.185882353	1.185882353	1	0	0	1	0	0	0	0	3	2.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216158055	6	46134347	G	A	ENPP5	CCDS4915.1	r.?	-	-	intronic	32	0	0	78	19	24.35897436	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.20361991	1.20361991	1	0	0	1	0	0	0	0	3	9.67E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216158114	6	46745624	G	A	-	-	-	-	-	-	36	0	0	84	21	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.15E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216158759	6	52047420	C	A	IL17A	CCDS4937.1	r.?	-	-	upstream	51	0	0	83	14	16.86746988	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.833451453	0.833451453	1	0	0.0075	0.9925	0	0	0	0	3	1.17E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216158775	6	52160452	G	A	-	-	-	-	-	-	39	0	0	66	16	24.24242424	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.197860963	1.197860963	1	0	0	1	0	0	0	0	3	1.03E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216158982	6	53916386	T	A	C6orf142	CCDS4954.1	r.?	-	-	intronic	28	0	0	96	23	23.95833333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.183823529	1.183823529	1	0	0	1	0	0	0	0	3	7.21E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216159284	6	55939905	C	A	COL21A1	ENST00000244728	r.?	-	-	intronic	23	0	0	71	12	16.90140845	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.835128418	0.835128418	1	0	0.00875	0.99125	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216160073	6	58010835	G	A	-	-	-	-	-	-	44	0	0	78	15	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0.0025	0.9975	0	0	0	0	3	9.92E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216160129	6	58191329	C	A	-	-	-	-	-	-	40	0	0	55	14	25.45454545	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.257754011	1.257754011	1	0	0	1	0	0	0	0	3	2.19E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216160197	6	58494041	C	A	-	-	-	-	-	-	40	0	0	39	6	15.38461538	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.01625	0.98375	0	0	0	0	3	4.43E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216160231	6	58687702	G	A	-	-	-	-	-	-	33	0	0	61	12	19.67213115	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.972034716	0.972034716	1	0	0.00375	0.99625	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216160434	6	62022078	T	A	-	-	-	-	-	-	42	0	0	65	10	15.38461538	124	0	0	185	22	11.89189189							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.02	0.98	0	0	0	0	3	1.36E-12	1	2.00E-23	1	YES	somatic	1_1
1353824	PD9772b	1216160509	6	62557664	G	A	KHDRBS2	CCDS4963.1	r.?	-	-	intronic	24	0	0	95	10	10.52631579	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.520123839	0.520123839	1	0.00875	0.29625	0.695	0	0	0	0	3	6.70E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216160557	6	62997603	T	A	KHDRBS2	CCDS4963.1	r.?	-	-	upstream	26	0	0	79	14	17.72151899	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.875651526	0.875651526	1	0	0.00125	0.99875	0	0	0	0	3	5.60E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216160731	6	64317171	G	A	-	-	-	-	-	-	34	0	0	87	15	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0.00125	0.00125	0.9975	0	0	0	0	3	5.73E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216161028	6	66472801	C	A	-	-	-	-	-	-	37	0	0	72	12	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01375	0.98625	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216161237	6	68000022	G	A	-	-	-	-	-	-	28	0	0	70	9	12.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.635294118	0.635294118	1	0.00125	0.065	0.93375	0	0	0	0	3	9.65E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216161256	6	68160034	G	A	-	-	-	-	-	-	38	0	0	100	15	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.0175	0.9825	0	0	0	0	3	5.19E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216161257	6	68160035	C	A	-	-	-	-	-	-	39	0	0	98	15	15.30612245	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.756302521	0.756302521	1	0	0.01875	0.98125	0	0	0	0	3	3.78E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216161308	6	68451319	T	A	-	-	-	-	-	-	46	0	0	82	18	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0.00125	0.99875	0	0	0	0	3	1.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216161573	6	70201763	G	A	-	-	-	-	-	-	34	0	0	67	15	22.3880597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.106233538	1.106233538	1	0	0	1	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216161606	6	70431158	G	A	LMBRD1	CCDS4969.1	r.?	-	-	intronic	26	0	0	67	17	25.37313433	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.253731343	1.253731343	1	0	0.00125	0.99875	0	0	0	0	3	2.03E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216161703	6	71156591	G	A	FAM135A	CCDS34481.1	r.?	-	-	intronic	49	0	0	75	17	22.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.12	1.12	1	0	0	1	0	0	0	0	3	1.72E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216161774	6	71630099	G	A	B3GAT2	CCDS4974.1	r.?	-	-	intronic	33	0	0	24	7	29.16666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.441176471	1.441176471	1	0	0.00125	0.99875	0	0	0	0	3	2.51E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216161838	6	72144445	C	A	-	-	-	-	-	-	47	0	0	77	17	22.07792208	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.090909091	1.090909091	1	0	0	1	0	0	0	0	3	2.82E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216162004	6	73603948	C	A	KCNQ5	CCDS4976.1	r.?	-	-	intronic	34	0	0	82	15	18.29268293	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.903873745	0.903873745	1	0	0.005	0.995	0	0	0	0	3	2.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216162239	6	75275564	G	A	-	-	-	-	-	-	36	0	0	64	8	12.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.617647059	0.617647059	1	0.00375	0.08125	0.915	0	0	0	0	3	1.35E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216162274	6	75414411	T	A	-	-	-	-	-	-	29	0	0	55	9	16.36363636	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.80855615	0.80855615	1	0	0.00625	0.99375	0	0	0	0	3	1.01E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216162340	6	76048284	G	A	FILIP1	CCDS4984.1	r.?	-	-	intronic	48	0	0	88	17	19.31818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.954545455	0.954545455	1	0	0.00125	0.99875	0	0	0	0	3	3.34E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216162443	6	76860373	G	A	-	-	-	-	-	-	23	0	0	55	14	25.45454545	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.003208556	1.003208556	1	0	0.00125	0.99875	0	0	0	0	3	2.19E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216162445	6	76875318	T	A	-	-	-	-	-	-	39	0	0	13	4	30.76923077	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.212669683	1.212669683	1	0	0.01375	0.98625	0	0	0	0	3	4.31E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216162496	6	77238758	G	A	-	-	-	-	-	-	33	0	0	69	26	37.68115942	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.485080989	0.742540494	2	0	0.01875	0.98125	0	0	0	0	3	8.50E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1216162598	6	78282215	C	A	-	-	-	-	-	-	35	0	0	65	14	21.53846154	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.848868778	0.848868778	1	0	0.005	0.995	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216162657	6	78664065	T	A	-	-	-	-	-	-	44	0	0	47	14	29.78723404	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.173967459	1.173967459	1	0	0	1	0	0	0	0	3	1.79E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216162804	6	80099764	C	A	-	-	-	-	-	-	25	0	0	37	9	24.32432432	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.958664547	0.958664547	1	0	0.00125	0.99875	0	0	0	0	3	2.14E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216163097	6	83144210	T	A	-	-	-	-	-	-	45	0	0	62	13	20.96774194	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.826375712	0.826375712	1	0	0.01625	0.98375	0	0	0	0	3	8.08E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216163178	6	83588584	G	A	-	-	-	-	-	-	55	0	0	90	22	24.44444444	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.963398693	0.963398693	1	0	0.00125	0.99875	0	0	0	0	3	9.17E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216163346	6	85678783	G	A	-	-	-	-	-	-	34	0	0	57	19	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	1.01E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216163710	6	89241248	G	A	-	-	-	-	-	-	39	0	0	45	6	13.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.525490196	0.525490196	1	0.01125	0.15125	0.8375	0	0	0	0	3	1.08E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216163833	6	90451558	G	A	MDN1	CCDS5024.1	r.?	-	-	intronic	37	0	0	28	7	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0075	0.9925	0	0	0	0	3	8.44E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216163894	6	91300527	T	A	MAP3K7	CCDS5028.1	r.?	-	-	upstream	46	0	0	61	16	26.2295082	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.033751205	1.033751205	1	0	0	1	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216164313	6	95531359	T	A	-	-	-	-	-	-	42	0	0	59	14	23.72881356	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.935194417	0.935194417	1	0	0	1	0	0	0	0	3	6.58E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216164475	6	97478580	G	A	KLHL32	CCDS5038.1	r.?	-	-	intronic	33	0	0	69	21	30.43478261	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.199488491	1.199488491	1	0	0	1	0	0	0	0	3	1.02E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216164555	6	98319433	G	A	-	-	-	-	-	-	28	0	0	54	13	24.07407407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.948801743	0.948801743	1	0	0	1	0	0	0	0	3	1.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216164651	6	99007097	G	A	-	-	-	-	-	-	35	0	0	56	11	19.64285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.774159664	0.774159664	1	0	0.015	0.985	0	0	0	0	3	5.91E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216164820	6	100829055	G	A	SIM1	CCDS5045.1	r.?	-	-	downstream	41	0	0	73	19	26.02739726	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.025785657	1.025785657	1	0	0	1	0	0	0	0	3	2.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216164981	6	102297831	G	A	GRIK2	CCDS5049.1	r.?	-	-	intronic	35	0	0	68	13	19.11764706	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.753460208	0.753460208	1	0	0.02	0.98	0	0	0	0	3	2.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216165047	6	102828703	T	A	-	-	-	-	-	-	38	0	0	67	17	25.37313433	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1	1	1	0	0	1	0	0	0	0	3	2.03E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216165153	6	103907738	G	A	-	-	-	-	-	-	44	0	0	65	18	27.69230769	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.091402715	1.091402715	1	0	0.00125	0.99875	0	0	0	0	3	1.52E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216165237	6	104731099	C	A	-	-	-	-	-	-	39	0	0	64	14	21.875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.862132353	0.862132353	1	0	0.00875	0.99125	0	0	0	0	3	2.31E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216166709	6	118213595	T	A	-	-	-	-	-	-	39	0	0	63	21	33.33333333	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.682318256	0.888131654	1.894221704	0	0	1	0	0	0	0	3	1.08E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216166723	6	118271614	T	A	SLC35F1	CCDS34524.1	r.?	-	-	intronic	25	0	0	72	20	27.77777778	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.40193188	1.40193188	1	0	0	1	0	0	0	0	3	2.32E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216167663	6	125764257	C	A	-	-	-	-	-	-	38	0	0	74	18	24.32432432	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.227637646	1.227637646	1	0	0	1	0	0	0	0	3	2.13E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216167826	6	127187830	C	A	-	-	-	-	-	-	33	0	0	58	21	36.20689655	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.827345691	0.964694728	1.894221704	0	0.00125	0.99875	0	0	0	0	3	1.34E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216167897	6	127728729	C	A	-	-	-	-	-	-	25	0	0	66	27	40.90909091	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	2.064663314	1.032331657	2	0	0	1	0	0	0	0	3	1.51E-44	1	1	1	NA	NA	NA
1353824	PD9772b	1216167965	6	128473298	T	A	PTPRK	CCDS47473.1	r.?	-	-	intronic	34	0	0	115	49	42.60869565	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	2.150441596	1.075220798	2	0	0	1	0	0	0	0	3	1.13E-80	1	1	1	NA	NA	NA
1353824	PD9772b	1216168109	6	129812299	G	A	LAMA2	CCDS5138.1	r.?	-	-	intronic	41	0	0	72	27	37.5	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.892608037	0.999148111	1.894221704	0	0	1	0	0	0	0	3	2.82E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1216168908	6	135983426	G	A	-	-	-	-	-	-	34	0	0	74	25	33.78378378	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.705052286	0.900133433	1.894221704	0	0.00125	0.99875	0	0	0	0	3	8.25E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216168935	6	136211715	C	A	PDE7B	CCDS5175.1	r.?	-	-	intronic	36	1	2.777777778	84	36	42.85714286	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	2.162980614	1.081490307	2	0	0	1	0	0	0	0	3	8.26E-60	0.165106833	1	1	NA	NA	NA
1353824	PD9772b	1216169244	6	138399964	C	A	-	-	-	-	-	-	40	0	0	72	6	8.333333333	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	0.420579564	0.420579564	1	0.05125	0.35	0.59875	0	0	0	0	3	1.84E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216169311	6	139034915	G	A	-	-	-	-	-	-	23	0	0	85	28	32.94117647	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.662526276	0.877683047	1.894221704	0	0	1	0	0	0	0	3	6.45E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1216169430	6	139776211	T	A	-	-	-	-	-	-	28	0	0	63	9	14.28571429	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	0.720993538	0.720993538	1	0	0.0225	0.9775	0	0	0	0	3	3.62E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216169733	6	142399150	C	A	NMBR	CCDS5196.1	r.?	-	-	intronic	40	0	0	80	14	17.5	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	0.880943379	0.880943379	1	0	0.00625	0.99375	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216170231	6	146325866	T	A	-	-	-	-	-	-	32	0	0	77	28	36.36363636	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.830531697	0.959793398	1.907214303	0	0	1	0	0	0	0	3	2.30E-44	1	1	1	NA	NA	NA
1353824	PD9772b	1216170483	6	148518082	G	A	-	-	-	-	-	-	32	0	0	75	28	37.33333333	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.879345876	0.985387889	1.907214303	0	0	1	0	0	0	0	3	9.34E-45	1	1	1	NA	NA	NA
1353824	PD9772b	1216171015	6	152624398	G	A	SYNE1	CCDS5236.1	r.?	-	-	intronic	31	0	0	72	24	33.33333333	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.677987389	0.879810615	1.907214303	0	0.00125	0.99875	0	0	0	0	3	3.76E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216171171	6	153725086	T	A	-	-	-	-	-	-	30	0	0	57	13	22.80701754	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.302862499	1.302862499	1	0	0	1	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216171289	6	154373305	C	A	OPRM1	CCDS47503.1	r.?	-	-	intronic	28	0	0	72	21	29.16666667	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.666160695	0.940603305	1.771374485	0	0.00125	0.99875	0	0	0	0	3	2.89E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216171677	6	156618219	G	A	-	-	-	-	-	-	37	0	0	77	13	16.88311688	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.964456655	0.964456655	1	0	0.005	0.995	0	0	0	0	3	1.67E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216171703	6	156731110	G	A	-	-	-	-	-	-	38	0	0	69	12	17.39130435	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.993487123	0.993487123	1	0	0.00125	0.99875	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216171789	6	157264970	G	A	ARID1B	CCDS5251.1	r.?	-	-	intronic	29	0	0	78	13	16.66666667	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.952091826	0.952091826	1	0	0.00625	0.99375	0	0	0	0	3	1.99E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216171903	6	157849618	C	A	ZDHHC14	CCDS5252.1	r.?	-	-	intronic	28	0	0	10	4	40	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	2.285020382	2.285020382	1	0	0.00625	0.99375	0	0	0	0	3	1.28E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216171934	6	158112691	T	A	-	-	-	-	-	-	22	0	0	27	3	11.11111111	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.634727884	0.822853097	0.771374485	0.00125	0.01375	0.985	0	0	0	0	3	0.000334187	1	1	1	NA	NA	NA
1353824	PD9772b	1216172293	6	160236327	G	A	PNLDC1	CCDS5271.1	r.?	-	-	intronic	25	0	0	47	9	19.14893617	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.093892736	1.093892736	1	0	0.005	0.995	0	0	0	0	3	2.24E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216172297	6	160254036	C	A	-	-	-	-	-	-	30	0	0	77	16	20.77922078	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.187023575	1.187023575	1	0	0	1	0	0	0	0	3	1.56E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216172310	6	160299390	G	A	-	-	-	-	-	-	36	0	0	50	12	24	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.371012229	1.371012229	1	0	0	1	0	0	0	0	3	2.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216172538	6	161909775	C	A	PARK2	CCDS5281.1	r.?	-	-	intronic	45	0	0	86	31	36.04651163	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	2.059175344	1.029587672	2	0	0	1	0	0	0	0	3	8.27E-49	1	1	1	NA	NA	NA
1353824	PD9772b	1216172774	6	163284476	G	A	PACRG	CCDS43524.1	r.?	-	-	intronic	37	0	0	59	11	18.6440678	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.065051873	1.065051873	1	0	0.00375	0.99625	0	0	0	0	3	1.10E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216173041	6	165398556	C	A	-	-	-	-	-	-	32	0	0	62	17	27.41935484	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.830339825	0.830339825	1	0	0.00625	0.99375	0	0	0	0	3	4.56E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216173376	6	168203715	C	A	-	-	-	-	-	-	37	0	0	67	18	26.86567164	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.813572647	0.813572647	1	0	0.005	0.995	0	0	0	0	3	2.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216173820	7	700129	C	A	PRKAR1B	CCDS34579.1	r.?	-	-	intronic	13	0	0	11	3	27.27272727	0	0	NA	0	0	NA							0.116617047	0	0	0.883382953	1	0	0.116617047	unphased	0.288489141	0.288489141	1	0.26125	0.71625	0.0225	0	0	0	0	2	2.00E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216173827	7	787418	G	A	HEATR2	CCDS34580.1	r.?	-	-	intronic	9	0	0	8	3	37.5	0	0	NA	0	0	NA							0.116617047	0	0	0.883382953	1	0	0.116617047	unphased	0.396672569	0.396672569	1	0.10375	0.76	0.13625	0	0	0	0	2	6.87E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216174162	7	4325508	G	A	-	-	-	-	-	-	37	0	0	78	11	14.1025641	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.414781297	0.414781297	1	0.1075	0.81	0.0825	0	0	0	0	2	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216174383	7	6042064	C	A	PMS2	CCDS5343.1	r.?	-	-	intronic	30	0	0	78	11	14.1025641	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.414781297	0.414781297	1	0.08125	0.83375	0.085	0	0	0	0	2	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216174443	7	6573897	T	A	GRID2IP	CCDS47537.1	r.?	-	-	intronic	37	0	0	33	6	18.18181818	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.534759358	0.534759358	1	0.00375	0.12875	0.8675	0	0	0	0	3	1.54E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216174512	7	6997405	T	A	-	-	-	-	-	-	32	0	0	65	12	18.46153846	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.542986425	0.542986425	1	0.0075	0.3275	0.665	0	0	0	0	3	7.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216174675	7	8328095	T	A	-	-	-	-	-	-	34	0	0	86	20	23.25581395	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.683994528	0.683994528	1	0	0.04875	0.95125	0	0	0	0	3	1.27E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216174949	7	10807316	C	A	-	-	-	-	-	-	41	0	0	82	21	25.6097561	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.753228121	0.753228121	1	0	0.01125	0.98875	0	0	0	0	3	6.53E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216175290	7	13678441	C	A	-	-	-	-	-	-	38	0	0	70	20	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	1.22E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216175398	7	14786920	C	A	DGKB	CCDS47547.1	r.?	-	-	intronic	41	0	0	69	13	18.84057971	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.742540494	0.742540494	1	0	0.0225	0.9775	0	0	0	0	3	3.64E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216175755	7	19199805	C	A	-	-	-	-	-	-	37	0	0	67	15	22.3880597	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.00375	0.99625	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216175831	7	19939517	G	A	-	-	-	-	-	-	28	0	0	73	15	20.54794521	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.809830782	0.809830782	1	0	0.01	0.99	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216176461	7	26045330	G	A	-	-	-	-	-	-	38	0	0	64	18	28.125	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.108455882	1.108455882	1	0	0.00125	0.99875	0	0	0	0	3	1.10E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216176495	7	26605203	C	A	-	-	-	-	-	-	33	0	0	54	17	31.48148148	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.240740741	1.240740741	1	0	0	1	0	0	0	0	3	3.02E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216176539	7	27075200	C	A	-	-	-	-	-	-	25	0	0	60	15	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216176729	7	28909864	C	A	-	-	-	-	-	-	32	0	0	46	8	17.39130435	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.685421995	0.685421995	1	0.00375	0.04375	0.9525	0	0	0	0	3	8.61E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216176737	7	28976836	C	A	-	-	-	-	-	-	37	0	0	61	16	26.2295082	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.033751205	1.033751205	1	0	0.00125	0.99875	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216176846	7	29898469	G	A	WIPF3	ENST00000409290	r.?	-	-	intronic	40	0	0	58	16	27.5862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.087221095	1.087221095	1	0	0	1	0	0	0	0	3	1.00E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216177406	7	35393498	C	A	-	-	-	-	-	-	38	0	0	43	14	32.55813953	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.283173735	1.283173735	1	0	0	1	0	0	0	0	3	4.18E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216177638	7	37849663	T	A	EPDR1	ENST00000476620	r.?	-	-	intronic	29	0	0	70	22	31.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.238655462	1.238655462	1	0	0	1	0	0	0	0	3	1.63E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216177884	7	40520735	G	A	C7orf10	ENST00000309930	r.?	-	-	intronic	31	0	0	52	13	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	6.47E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216178152	7	43478357	C	A	HECW1	CCDS5469.2	r.?	-	-	intronic	37	0	0	71	13	18.30985915	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.721623861	0.721623861	1	0	0.0275	0.9725	0	0	0	0	3	5.42E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216178317	7	45361965	G	A	-	-	-	-	-	-	34	0	0	60	15	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216178401	7	46301429	T	A	-	-	-	-	-	-	38	0	0	63	14	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.00375	0.99625	0	0	0	0	3	1.81E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216178897	7	52068790	C	A	-	-	-	-	-	-	34	0	0	65	21	32.30769231	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.273303167	1.273303167	1	0	0	1	0	0	0	0	3	2.35E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216179721	7	57164630	C	A	-	-	-	-	-	-	42	0	0	110	11	10	0	0	NA	0	0	NA							3.20903053	2	1	0.79096947	2	2	0.20903053	unphased	0.4150207	0.4150207	1	0.08625	0.79875	0.115	0	0	0	0	2	1.32E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216179756	7	57475528	C	A	-	-	-	-	-	-	29	0	0	62	10	16.12903226	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	8.29E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216185179	7	63132246	G	A	-	-	-	-	-	-	36	0	0	21	4	19.04761905	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	0.921503304	1.027642457	0.896715873	0	0.005	0.995	0	0	0	0	3	3.49E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216185346	7	64088800	G	A	-	-	-	-	-	-	31	0	0	73	21	28.76712329	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	1.391722455	1.391722455	1	0	0	1	0	0	0	0	3	4.03E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216186135	7	66084758	T	A	-	-	-	-	-	-	33	0	0	90	14	15.55555556	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	0.752561031	0.83924134	0.896715873	0	0.0025	0.9975	0	0	0	0	3	3.87E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216186726	7	69253150	G	A	AUTS2	CCDS5539.1	r.?	-	-	intronic	20	0	0	48	15	31.25	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	1.511841357	1.511841357	1	0	0	1	0	0	0	0	3	2.86E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216186832	7	70140909	C	A	AUTS2	CCDS5539.1	r.?	-	-	intronic	29	0	0	38	11	28.94736842	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	1.400442521	1.400442521	1	0	0	1	0	0	0	0	3	5.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216186846	7	70250937	G	A	AUTS2	CCDS5539.1	r.2546-4g>a	c.2225-4G>A	p.?	splice region	45	0	0	43	20	46.51162791	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	2.250182486	1.125091243	2	0	0.00125	0.99875	0	0	0	0	3	8.21E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216186864	7	70363700	G	A	-	-	-	-	-	-	34	0	0	69	21	30.43478261	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.808184143	0.904092072	2	0	0.0025	0.9975	0	0	0	0	3	1.02E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216186902	7	70483361	C	A	-	-	-	-	-	-	35	0	0	25	11	44	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.614117647	0.871372549	3	0	0.0075	0.9925	0	0	0	0	3	2.04E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216186950	7	70794463	G	A	WBSCR17	CCDS5540.1	r.?	-	-	intronic	38	0	0	82	16	19.51219512	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.964131994	0.964131994	1	0	0.00125	0.99875	0	0	0	0	3	4.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216187091	7	71596433	G	A	CALN1	CCDS47603.1	r.?	-	-	intronic	36	0	0	61	17	27.86885246	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.37704918	1.37704918	1	0	0	1	0	0	0	0	3	3.33E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216187291	7	72259098	T	A	-	-	-	-	-	-	31	1	3.225806452	41	10	24.3902439	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0.0025	0.9975	0	0	0	0	3	9.51E-15	0.143917729	1	1	NA	NA	NA
1353824	PD9772b	1216187597	7	75177874	C	A	HIP1	CCDS34669.1	r.?	-	-	intronic	30	0	0	32	7	21.875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.080882353	1.080882353	1	0.00125	0.005	0.99375	0	0	0	0	3	2.36E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216187772	7	76378106	C	A	-	-	-	-	-	-	41	0	0	78	15	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0.00125	0.99875	0	0	0	0	3	9.92E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216187901	7	77068436	G	A	-	-	-	-	-	-	25	0	0	71	15	21.12676056	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.043910522	1.043910522	1	0	0.00125	0.99875	0	0	0	0	3	2.15E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216188492	7	82061865	C	A	CACNA2D1	CCDS5598.1	r.?	-	-	intronic	44	0	0	79	15	18.98734177	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.938198064	0.938198064	1	0	0.00125	0.99875	0	0	0	0	3	1.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216188735	7	83688131	T	A	SEMA3A	CCDS5599.1	r.?	-	-	intronic	32	0	0	68	15	22.05882353	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.089965398	1.089965398	1	0	0.0025	0.9975	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216188767	7	83862405	C	A	SEMA3A	ENST00000424555	r.?	-	-	intronic	39	0	0	80	7	8.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.432352941	0.432352941	1	0.035	0.4625	0.5025	0	0	0	0	3	1.80E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216188876	7	84632412	T	A	SEMA3D	CCDS34676.1	r.?	-	-	intronic	40	0	0	64	11	17.1875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.849264706	0.849264706	1	0	0.005	0.995	0	0	0	0	3	2.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216189157	7	86884110	T	A	-	-	-	-	-	-	29	0	0	47	6	12.76595745	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.630788486	0.630788486	1	0.0025	0.055	0.9425	0	0	0	0	3	1.41E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216189450	7	89467893	C	A	-	-	-	-	-	-	38	0	0	65	9	13.84615385	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.684162896	0.684162896	1	0	0.04375	0.95625	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216189475	7	89661351	C	A	-	-	-	-	-	-	47	0	0	81	15	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.00125	0.99875	0	0	0	0	3	1.82E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216189679	7	90888443	T	A	-	-	-	-	-	-	37	0	0	78	14	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.00625	0.99375	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216189785	7	91788450	G	A	ENSG00000240720	ENST00000458448	r.2186c>u	c.1985C>T	p.A662V	missense	40	0	0	88	19	21.59090909	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06684492	1.06684492	1	0	0	1	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216189786	7	91788451	C	A	ENSG00000240720	ENST00000458448	r.2185g>u	c.1984G>T	p.A662S	missense	40	0	0	90	19	21.11111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.043137255	1.043137255	1	0	0	1	0	0	0	0	3	1.95E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216189911	7	92956389	G	A	CCDC132	CCDS43617.1	r.?	-	-	intronic	38	0	0	65	16	24.61538462	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.970135747	0.970135747	1	0	0	1	0	0	0	0	3	7.85E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216189951	7	93407440	G	A	GNGT1	ENST00000455502	r.?	-	-	intronic	45	0	0	68	24	35.29411765	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.39100346	0.69550173	2	0	0.05125	0.94875	0	0	0	0	3	7.25E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1216189967	7	93561366	G	A	-	-	-	-	-	-	33	0	0	63	18	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	7.98E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216190181	7	96436213	G	A	-	-	-	-	-	-	26	0	0	61	21	34.42622951	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.356798457	1.356798457	1	0	0	1	0	0	0	0	3	4.80E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216190371	7	98082983	G	A	-	-	-	-	-	-	38	0	0	22	6	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0.0075	0.9925	0	0	0	0	3	1.09E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216191012	7	103093331	G	A	-	-	-	-	-	-	28	0	0	64	19	29.6875	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.466911765	0.733455882	2	0	0.01375	0.98625	0	0	0	0	3	1.34E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216191181	7	104228642	C	A	LHFPL3	ENST00000424859	r.?	-	-	intronic	40	0	0	100	43	43	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.124705882	1.062352941	2	0	0	1	0	0	0	0	3	3.28E-71	1	1	1	NA	NA	NA
1353824	PD9772b	1216191412	7	105644392	T	A	CDHR3	CCDS47684.1	r.?	-	-	intronic	27	0	0	86	29	33.72093023	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.66621067	0.833105335	2	0	0	1	0	0	0	0	3	9.55E-45	1	1	1	NA	NA	NA
1353824	PD9772b	1216191864	7	108747025	C	A	-	-	-	-	-	-	29	0	0	96	31	32.29166667	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.595588235	0.797794118	2	0	0.00375	0.99625	0	0	0	0	3	4.97E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1216192024	7	109801195	T	A	-	-	-	-	-	-	39	0	0	82	30	36.58536585	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.807747489	0.903873745	2	0	0	1	0	0	0	0	3	1.61E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1216192025	7	109803183	T	A	-	-	-	-	-	-	24	0	0	79	26	32.91139241	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.626209978	0.813104989	2	0	0.00375	0.99625	0	0	0	0	3	5.99E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216193019	7	117726817	G	A	-	-	-	-	-	-	43	0	0	33	16	48.48484848	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.395721925	1.197860963	2	0	0	1	0	0	0	0	3	1.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216193364	7	120508746	T	A	-	-	-	-	-	-	35	0	0	41	19	46.34146341	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.289813486	1.144906743	2	0	0	1	0	0	0	0	3	4.20E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216193535	7	121667332	T	A	PTPRZ1	CCDS34740.1	r.?	-	-	intronic	36	0	0	68	30	44.11764706	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.179930796	1.089965398	2	0	0	1	0	0	0	0	3	1.38E-50	1	1	1	NA	NA	NA
1353824	PD9772b	1216193736	7	122874854	T	A	-	-	-	-	-	-	39	0	0	82	34	41.46341463	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.048780488	1.024390244	2	0	0	1	0	0	0	0	3	5.98E-56	1	1	1	NA	NA	NA
1353824	PD9772b	1216194233	7	126669709	C	A	GRM8	CCDS5794.1	r.?	-	-	intronic	43	0	0	77	26	33.76623377	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.668449198	0.834224599	2	0	0	1	0	0	0	0	3	2.70E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216194468	7	128297597	T	A	ENSG00000214175	ENST00000415418	r.1901u>a	c.?	p.?	5'UTR variant	41	0	0	10	5	50	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.470588235	0.823529412	3	0	0.0125	0.9875	0	0	0	0	3	7.71E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216195431	7	135470203	T	A	-	-	-	-	-	-	33	0	0	75	31	41.33333333	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.042352941	1.021176471	2	0	0	1	0	0	0	0	3	4.27E-51	1	1	1	NA	NA	NA
1353824	PD9772b	1216195745	7	137461695	C	A	DGKI	CCDS5845.1	r.?	-	-	intronic	34	0	0	76	31	40.78947368	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.015479876	1.007739938	2	0	0	1	0	0	0	0	3	7.17E-51	1	1	1	NA	NA	NA
1353824	PD9772b	1216196083	7	139551218	C	A	TBXAS1	CCDS5855.1	r.?	-	-	intronic	36	0	0	57	21	36.84210526	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.820433437	0.910216718	2	0	0	1	0	0	0	0	3	8.56E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216196132	7	139883820	G	A	-	-	-	-	-	-	33	0	0	46	14	30.43478261	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.503836317	1.503836317	1	0	0	1	0	0	0	0	3	1.26E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216196351	7	141695120	G	A	MGAM	CCDS47727.1	r.?	-	-	upstream	43	0	0	97	37	38.1443299	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.266221953	1.133110976	2	0	0	1	0	0	0	0	3	4.56E-59	1	1	1	NA	NA	NA
1353824	PD9772b	1216196574	7	142184096	T	A	-	-	-	-	-	-	33	0	0	91	32	35.16483516	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.089204913	1.044602456	2	0	0	1	0	0	0	0	3	6.48E-50	1	1	1	NA	NA	NA
1353824	PD9772b	1216196760	7	142834791	G	A	PIP	CCDS34768.1	r.?	-	-	intronic	20	0	0	35	23	65.71428571	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	3.904201681	1.30140056	3	0	0	1	0	0	0	0	3	9.39E-45	1	1	1	NA	NA	NA
1353824	PD9772b	1216196907	7	143977947	T	A	OR2A7	ENST00000414940	r.?	-	-	upstream	50	0	0	123	9	7.317073171	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.43472023	0.43472023	1	0.0525	0.59875	0.34875	0	0	0	0	2	1.54E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216197109	7	145264866	C	A	-	-	-	-	-	-	41	0	0	98	21	21.42857143	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.273109244	1.273109244	1	0	0	1	0	0	0	0	3	4.19E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216197253	7	146187761	G	A	CNTNAP2	CCDS5889.1	r.?	-	-	intronic	49	0	0	122	22	18.03278689	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.071359691	1.071359691	1	0	0	1	0	0	0	0	3	1.39E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216197805	7	149320467	C	A	-	-	-	-	-	-	25	0	0	46	11	23.91304348	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.703324808	0.703324808	1	0	0.03125	0.96875	0	0	0	0	3	5.55E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216197836	7	149644084	T	A	-	-	-	-	-	-	29	0	0	22	6	27.27272727	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.802139037	0.802139037	1	0	0.02	0.98	0	0	0	0	3	1.09E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216197984	7	150859945	G	A	GBX1	CCDS43682.1	r.?	-	-	intronic	25	0	0	34	8	23.52941176	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.692041522	0.692041522	1	0	0.03875	0.96125	0	0	0	0	3	6.32E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216198636	7	152585634	G	A	-	-	-	-	-	-	30	0	0	44	6	13.63636364	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.401069519	0.401069519	1	0.07125	0.52625	0.4025	0	0	0	0	2	9.37E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216199199	7	157840637	T	A	PTPRN2	CCDS5949.1	r.?	-	-	intronic	32	0	0	30	3	10	0	0	NA	0	0	NA							1.393758832	1	0	0.606241168	1	1	0.393758832	unphased	0.23349353	0.59298614	0.393758832	0.00375	0.05125	0.945	0	0	0	0	3	0.000458697	1	1	1	NA	NA	NA
1353824	PD9772b	1216199286	7	158235596	G	A	PTPRN2	CCDS5949.1	r.?	-	-	intronic	18	0	0	26	4	15.38461538	0	0	NA	0	0	NA							1.393758832	1	0	0.606241168	1	1	0.393758832	unphased	0.359220816	0.91228637	0.393758832	0	0.0175	0.9825	0	0	0	0	3	8.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216199932	8	4416218	G	A	-	-	-	-	-	-	35	0	0	49	18	36.73469388	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.447779112	0.723889556	2	0	0.02	0.98	0	0	0	0	3	3.80E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216200138	8	6056649	T	A	-	-	-	-	-	-	40	0	0	16	5	31.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.231617647	1.231617647	1	0	0.0025	0.9975	0	0	0	0	3	1.30E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216200159	8	6231167	G	A	-	-	-	-	-	-	35	0	0	41	5	12.19512195	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.480631277	0.480631277	1	0.01375	0.17875	0.8075	0	0	0	0	3	2.02E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216200212	8	6831615	C	A	DEFA1	CCDS34797.1	r.?	-	-	downstream	33	1	3.03030303	37	12	32.43243243	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.278219396	1.278219396	1	0	0	1	0	0	0	0	3	4.03E-19	0.15245715	1	1	NA	NA	NA
1353824	PD9772b	1216201459	8	15138731	G	A	-	-	-	-	-	-	51	0	0	82	31	37.80487805	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.868005739	0.934002869	2	0	0	1	0	0	0	0	3	1.35E-49	1	1	1	NA	NA	NA
1353824	PD9772b	1216201673	8	17236951	G	A	MTMR7	CCDS34851.1	r.?	-	-	intronic	31	0	0	60	13	21.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.853921569	0.853921569	1	0	0.005	0.995	0	0	0	0	3	5.07E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216201800	8	18478093	C	A	PSD3	CCDS43720.1	r.?	-	-	intronic	33	0	0	38	15	39.47368421	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.555727554	0.777863777	2	0	0.01	0.99	0	0	0	0	3	4.24E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216202088	8	21320780	G	A	-	-	-	-	-	-	34	0	0	41	9	21.95121951	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.865136298	0.865136298	1	0	0.00625	0.99375	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216202119	8	21681875	C	A	-	-	-	-	-	-	28	0	0	52	15	28.84615385	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.136877828	1.136877828	1	0	0	1	0	0	0	0	3	1.15E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216202650	8	26875406	T	A	-	-	-	-	-	-	37	0	0	69	16	23.1884058	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.913895993	0.913895993	1	0	0.00125	0.99875	0	0	0	0	3	2.27E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216202659	8	26932122	G	A	-	-	-	-	-	-	29	0	0	57	11	19.29824561	149	1	0.67114094	254	57	22.44094488							3	2	1	1	NA	NA	NA	unphased	0.760577915	0.760577915	1	0	0.02	0.98	0	0	0	0	3	7.29E-15	1	8.52E-75	0.526152023	YES	somatic	1_1
1353824	PD9772b	1216202921	8	30049416	G	A	AC026979.1	ENST00000509266	r.?	-	-	upstream	28	0	0	82	30	36.58536585	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.441893831	0.720946915	2	0	0.0275	0.9725	0	0	0	0	3	1.61E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1216203129	8	31925029	C	A	NRG1	CCDS47836.1	r.?	-	-	intronic	26	0	0	46	7	15.2173913	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.599744246	0.599744246	1	0.00375	0.08375	0.9125	0	0	0	0	3	3.53E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216203468	8	35618167	C	A	UNC5D	CCDS6093.2	r.?	-	-	intronic	43	0	0	40	12	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0	1	0	0	0	0	3	1.20E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216203513	8	36387308	C	A	-	-	-	-	-	-	45	0	0	64	13	20.3125	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.800551471	0.800551471	1	0	0.01625	0.98375	0	0	0	0	3	1.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216203676	8	38344855	C	A	-	-	-	-	-	-	42	0	0	61	12	19.67213115	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.775313404	0.775313404	1	0	0.00625	0.99375	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216203922	8	40558871	T	A	ZMAT4	CCDS34885.1	r.?	-	-	intronic	27	0	0	55	16	29.09090909	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.146524064	1.146524064	1	0	0	1	0	0	0	0	3	3.78E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216203932	8	40654481	G	A	ZMAT4	CCDS34885.1	r.?	-	-	intronic	35	0	0	21	8	38.0952381	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.50140056	1.50140056	1	0	0.0025	0.99625	0	0	0	0.00125	3	7.50E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216204171	8	42658501	G	A	-	-	-	-	-	-	28	0	0	29	7	24.13793103	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.192697769	1.192697769	1	0	0.00625	0.99375	0	0	0	0	3	1.11E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216204928	8	47499034	G	A	-	-	-	-	-	-	38	0	0	76	17	22.36842105	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.105263158	1.105263158	1	0	0	1	0	0	0	0	3	2.21E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216205150	8	49548755	C	A	-	-	-	-	-	-	34	0	0	72	18	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216205181	8	49874158	G	A	-	-	-	-	-	-	38	0	0	78	13	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01	0.99	0	0	0	0	3	1.99E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216205242	8	50277292	T	A	-	-	-	-	-	-	35	0	0	66	14	21.21212121	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.048128342	1.048128342	1	0	0.00125	0.99875	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216205294	8	50773813	C	A	-	-	-	-	-	-	28	0	0	71	16	22.53521127	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.113504557	1.113504557	1	0	0	1	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216205358	8	51158043	G	A	-	-	-	-	-	-	34	0	0	70	12	17.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.847058824	0.847058824	1	0	0.0075	0.9925	0	0	0	0	3	1.99E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216205509	8	52567488	G	A	PXDNL	CCDS47855.1	r.?	-	-	intronic	36	0	0	77	15	19.48051948	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.962566845	0.962566845	1	0	0.00125	0.99875	0	0	0	0	3	8.05E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216205856	8	55248011	G	A	RNU105C	ENST00000362342	r.?	-	-	downstream	37	0	0	48	12	25	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.485294118	1.485294118	1	0	0	1	0	0	0	0	3	1.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216205880	8	55416584	T	A	-	-	-	-	-	-	37	0	0	105	24	22.85714286	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.357983193	1.357983193	1	0	0	1	0	0	0	0	3	1.21E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216205979	8	56062524	G	A	XKR4	CCDS34893.1	r.?	-	-	intronic	51	0	0	76	15	19.73684211	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.172600619	1.172600619	1	0	0.00125	0.99875	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216206144	8	56982314	C	A	RPS20	CCDS6163.1	r.?	-	-	downstream	33	0	0	72	5	6.944444444	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.412581699	0.412581699	1	0.0325	0.27875	0.68875	0	0	0	0	3	3.31E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216206537	8	59912646	T	A	TOX	CCDS34897.1	r.?	-	-	intronic	31	0	0	106	19	17.9245283	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.064927858	1.064927858	1	0	0	1	0	0	0	0	3	5.64E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216206624	8	60484631	C	A	-	-	-	-	-	-	33	0	0	90	12	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0	0.04625	0.95375	0	0	0	0	3	4.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216206674	8	60975206	C	A	-	-	-	-	-	-	35	0	0	93	18	19.35483871	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	1.95E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216206699	8	61217885	G	A	-	-	-	-	-	-	43	0	0	72	15	20.83333333	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.237745098	1.237745098	1	0	0	1	0	0	0	0	3	2.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216206990	8	62829124	T	A	-	-	-	-	-	-	43	0	0	88	8	9.090909091	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.540106952	0.540106952	1	0.00875	0.17625	0.815	0	0	0	0	3	1.76E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216207008	8	62981218	C	A	-	-	-	-	-	-	30	0	0	69	12	17.39130435	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.033248082	1.033248082	1	0	0.0025	0.9975	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216207237	8	64409811	G	A	-	-	-	-	-	-	36	0	0	88	12	13.63636364	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.810160428	0.810160428	1	0	0.01	0.99	0	0	0	0	3	3.53E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216207389	8	65754371	G	A	-	-	-	-	-	-	40	0	0	77	14	18.18181818	386	0	0	182	18	9.89010989							5	3	2	1	NA	NA	NA	unphased	1.080213904	1.080213904	1	0	0.0025	0.9975	0	0	0	0	3	3.82E-18	1	5.51E-18	1	YES	somatic	1_1
1353824	PD9772b	1216207401	8	65860134	G	A	-	-	-	-	-	-	34	0	0	87	18	20.68965517	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.229208925	1.229208925	1	0	0	1	0	0	0	0	3	5.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216207426	8	66121773	G	A	-	-	-	-	-	-	49	0	0	99	16	16.16161616	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.960190137	0.960190137	1	0	0.00125	0.99875	0	0	0	0	3	1.17E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216207546	8	66895646	G	A	-	-	-	-	-	-	24	0	0	89	13	14.60674157	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.867812293	0.867812293	1	0	0.005	0.995	0	0	0	0	3	1.21E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216207675	8	67949641	C	A	-	-	-	-	-	-	42	0	0	59	9	15.25423729	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.906281157	0.906281157	1	0	0.0025	0.9975	0	0	0	0	3	1.96E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216207685	8	68025630	C	A	CSPP1	CCDS47870.1	r.?	-	-	intronic	38	0	0	81	9	11.11111111	1	0	0	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.660130719	0.660130719	1	0	0.0625	0.9375	0	0	0	0	3	3.68E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216208046	8	70311968	T	A	-	-	-	-	-	-	35	0	0	120	17	14.16666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.841666667	0.841666667	1	0	0.01125	0.98875	0	0	0	0	3	8.90E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216208396	8	72552600	G	A	-	-	-	-	-	-	44	0	0	72	16	22.22222222	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.320261438	1.320261438	1	0	0	1	0	0	0	0	3	4.82E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216208470	8	73366826	T	A	-	-	-	-	-	-	41	0	0	83	19	22.89156627	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.131112686	1.131112686	1	0	0	1	0	0	0	0	3	3.60E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216208515	8	73687431	C	A	KCNB2	CCDS6209.1	r.?	-	-	intronic	34	0	0	39	12	30.76923077	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.520361991	1.520361991	1	0	0	1	0	0	0	0	3	8.43E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216208844	8	76454367	C	A	HNF4G	CCDS6220.2	r.?	-	-	intronic	39	0	0	63	18	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0	1	0	0	0	0	3	7.98E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216208932	8	77184618	T	A	-	-	-	-	-	-	31	0	0	76	15	19.73684211	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0.00375	0.99625	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216208979	8	77453683	T	A	-	-	-	-	-	-	32	0	0	80	19	23.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.173529412	1.173529412	1	0	0	1	0	0	0	0	3	1.65E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216209143	8	78725607	G	A	-	-	-	-	-	-	40	0	0	102	14	13.7254902	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.815455594	0.815455594	1	0	0.0125	0.9875	0	0	0	0	3	2.41E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216209235	8	79334478	C	A	-	-	-	-	-	-	29	0	0	99	18	18.18181818	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.080213904	1.080213904	1	0	0	1	0	0	0	0	3	6.53E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216209243	8	79425780	G	A	PKIA	CCDS6222.1	r.?	-	-	upstream	25	0	0	96	12	12.5	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.742647059	0.742647059	1	0	0.0225	0.9775	0	0	0	0	3	1.03E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216209244	8	79426516	C	A	PKIA	CCDS6222.1	r.?	-	-	upstream	37	0	0	94	18	19.14893617	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.13767209	1.13767209	1	0	0.00125	0.99875	0	0	0	0	3	2.40E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216209845	8	83442388	G	A	-	-	-	-	-	-	33	0	0	70	24	34.28571429	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.03697479	1.018487395	2	0	0	1	0	0	0	0	3	1.68E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216209968	8	84171132	G	A	-	-	-	-	-	-	42	0	0	32	17	53.125	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	3.15625	1.052083333	3	0	0	1	0	0	0	0	3	4.02E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216210069	8	84700945	T	A	-	-	-	-	-	-	36	0	0	96	33	34.375	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.042279412	1.021139706	2	0	0	1	0	0	0	0	3	4.94E-51	1	1	1	NA	NA	NA
1353824	PD9772b	1216210176	8	85183933	G	A	-	-	-	-	-	-	41	0	0	95	18	18.94736842	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.125696594	1.125696594	1	0	0	1	0	0	0	0	3	2.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216210467	8	86958125	C	A	-	-	-	-	-	-	26	0	0	81	15	18.51851852	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.100217865	1.100217865	1	0	0	1	0	0	0	0	3	1.82E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216210542	8	87325646	C	A	-	-	-	-	-	-	26	0	0	99	16	16.16161616	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.960190137	0.960190137	1	0	0	1	0	0	0	0	3	1.17E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216210765	8	88662225	C	A	-	-	-	-	-	-	23	0	0	92	24	26.08695652	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.549872123	0.774936061	2	0	0.00875	0.99125	0	0	0	0	3	3.47E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216210809	8	88961864	G	A	-	-	-	-	-	-	34	0	0	97	13	13.40206186	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.796240146	0.796240146	1	0	0.0075	0.9925	0	0	0	0	3	3.85E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216210879	8	89595103	C	A	-	-	-	-	-	-	31	0	0	84	12	14.28571429	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.848739496	0.848739496	1	0	0.0075	0.9925	0	0	0	0	3	1.98E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216211118	8	91335234	C	A	-	-	-	-	-	-	36	0	0	81	10	12.34567901	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.733478577	0.733478577	1	0	0.0275	0.9725	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216211269	8	92410887	C	A	SLC26A7	CCDS6254.1	r.?	-	-	downstream	47	0	0	96	12	12.5	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.742647059	0.742647059	1	0	0.025	0.975	0	0	0	0	3	1.03E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216211411	8	93544443	C	A	-	-	-	-	-	-	42	0	0	101	13	12.87128713	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.015	0.985	0	0	0	0	3	6.62E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216211999	8	97138883	G	A	-	-	-	-	-	-	37	0	0	96	12	12.5	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.742647059	0.742647059	1	0	0.015	0.985	0	0	0	0	3	1.03E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216212003	8	97149069	C	A	-	-	-	-	-	-	32	0	0	101	19	18.81188119	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.117647059	1.117647059	1	0	0	1	0	0	0	0	3	2.10E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216212004	8	97149131	C	A	-	-	-	-	-	-	42	0	0	87	14	16.09195402	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.956051386	0.956051386	1	0	0.00125	0.99875	0	0	0	0	3	2.35E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216212282	8	99040186	T	A	MATN2	ENST00000254898	r.?	-	-	intronic	40	0	0	56	10	17.85714286	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.06092437	1.06092437	1	0	0.00375	0.99625	0	0	0	0	3	2.82E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216212461	8	100150359	T	A	VPS13B	CCDS6280.1	r.?	-	-	intronic	40	0	0	65	14	21.53846154	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.279638009	1.279638009	1	0	0	1	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216212969	8	102987561	G	A	NCALD	CCDS6292.1	r.?	-	-	intronic	37	0	0	104	25	24.03846154	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.756313945	0.878156973	2	0	0	1	0	0	0	0	3	1.51E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216213019	8	103312525	G	A	UBR5	CCDS34933.1	r.?	-	-	intronic	25	0	0	84	22	26.19047619	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.91354586	0.95677293	2	0	0	1	0	0	0	0	3	1.66E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216214372	8	111128319	G	A	-	-	-	-	-	-	33	0	0	58	22	37.93103448	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	2.77134228	0.92378076	3	0	0.00125	0.99875	0	0	0	0	3	1.13E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216214514	8	112076121	G	A	-	-	-	-	-	-	44	0	0	100	25	25	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.826566503	0.913283251	2	0	0	1	0	0	0	0	3	5.04E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216214537	8	112207502	T	A	-	-	-	-	-	-	41	0	0	117	25	21.36752137	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.561167951	1.143637765	1.365089541	0	0.00125	0.99875	0	0	0	0	3	3.94E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216214626	8	112648577	C	A	-	-	-	-	-	-	48	0	0	113	23	20.3539823	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.487116091	1.089390876	1.365089541	0	0	1	0	0	0	0	3	4.50E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216214696	8	113089823	C	A	-	-	-	-	-	-	34	0	0	98	16	16.32653061	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.192859757	1.192859757	1	0	0	1	0	0	0	0	3	9.83E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216214712	8	113194704	C	A	-	-	-	-	-	-	47	0	0	105	18	17.14285714	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.252502745	1.252502745	1	0	0	1	0	0	0	0	3	2.02E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216214790	8	113548103	T	A	CSMD3	CCDS6315.1	r.?	-	-	intronic	31	0	0	60	5	8.333333333	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.608855501	0.608855501	1	0.00375	0.06625	0.93	0	0	0	0	3	1.36E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216214966	8	114681887	C	A	-	-	-	-	-	-	29	0	0	113	28	24.77876106	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.810402198	0.905201099	2	0	0	1	0	0	0	0	3	6.41E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216215056	8	115120180	T	A	-	-	-	-	-	-	33	0	0	68	5	7.352941176	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.537225442	0.537225442	1	0.005	0.07875	0.91625	0	0	0	0	3	2.51E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216215259	8	116437826	G	A	TRPS1	CCDS6318.2	r.?	-	-	intronic	30	0	0	112	15	13.39285714	221	0	0	130	14	10.76923077							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.978517769	0.978517769	1	0	0.00125	0.99875	0	0	0	0	3	3.04E-17	1	7.76E-15	1	YES	somatic	1_1
1353824	PD9772b	1216215455	8	117611388	T	A	-	-	-	-	-	-	24	0	0	112	10	8.928571429	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.65234518	0.65234518	1	0	0.05625	0.94375	0	0	0	0	3	3.48E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216215584	8	118391386	G	A	-	-	-	-	-	-	42	0	0	101	20	19.8019802	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.446785349	1.446785349	1	0	0	1	0	0	0	0	3	4.33E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216215890	8	120110960	T	A	COLEC10	CCDS6327.1	r.?	-	-	intronic	37	0	0	107	20	18.69158879	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.365657198	1.365657198	1	0	0	1	0	0	0	0	3	1.51E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216216169	8	121355788	G	A	COL14A1	CCDS34938.1	r.?	-	-	intronic	39	0	0	99	13	13.13131313	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.959408668	0.959408668	1	0	0.0025	0.9975	0	0	0	0	3	5.06E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216216180	8	121387368	C	A	COL14A1	CCDS34938.1	r.?	-	-	downstream	48	0	0	113	5	4.424778761	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.323286107	0.885498132	0.365089541	0	0.01875	0.98125	0	0	0	0	3	0.000280259	1	1	1	NA	NA	NA
1353824	PD9772b	1216216483	8	122853551	G	A	-	-	-	-	-	-	26	0	0	103	14	13.59223301	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.993084701	0.993084701	1	0	0.0025	0.9975	0	0	0	0	3	2.77E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216216491	8	122902609	G	A	-	-	-	-	-	-	44	0	0	96	9	9.375	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.684962439	0.684962439	1	0.00125	0.0475	0.95125	0	0	0	0	3	1.71E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216217262	8	127386079	C	A	-	-	-	-	-	-	29	0	0	85	12	14.11764706	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.031472849	1.031472849	1	0	0.0025	0.9975	0	0	0	0	3	2.29E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216217923	8	130627365	C	A	AC013300.1	ENST00000446592	r.?	-	-	intronic	28	0	0	114	49	42.98245614	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	2.832895176	0.944298392	3	0	0	1	0	0	0	0	3	6.54E-81	1	1	1	NA	NA	NA
1353824	PD9772b	1216218440	8	133653565	T	A	LRRC6	CCDS6365.1	r.?	-	-	intronic	39	0	0	112	16	14.28571429	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	0.941545335	0.941545335	1	0	0	1	0	0	0	0	3	9.24E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216218937	8	136670447	G	A	-	-	-	-	-	-	27	0	0	110	23	20.90909091	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.378079991	1.378079991	1	0	0	1	0	0	0	0	3	2.29E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216219009	8	137058831	T	A	-	-	-	-	-	-	46	0	0	113	18	15.92920354	199	0	0	346	19	5.49132948							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.04986471	1.04986471	1	0	0	1	0	0	0	0	3	8.20E-22	1	3.50E-14	1	YES	somatic	1_1
1353824	PD9772b	1216219259	8	138426593	G	A	-	-	-	-	-	-	43	0	0	114	30	26.31578947	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.734425618	1.051395878	1.649640877	0	0	1	0	0	0	0	3	1.79E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1216219625	8	140013494	T	A	-	-	-	-	-	-	30	0	0	75	8	10.66666667	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	0.703020517	1.082167921	0.649640877	0	0.0025	0.9975	0	0	0	0	3	4.89E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216219726	8	140659594	G	A	KCNK9	CCDS6377.1	r.?	-	-	intronic	37	0	0	13	6	46.15384615	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	3.041915699	1.0139719	3	0	0.0075	0.9925	0	0	0	0	3	2.60E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216219751	8	140940269	G	A	TRAPPC9	CCDS34946.1	r.?	-	-	intronic	36	0	0	100	15	15	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	0.988622602	0.988622602	1	0	0.00375	0.99625	0	0	0	0	3	5.19E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216219812	8	141381430	G	A	TRAPPC9	CCDS34946.1	r.?	-	-	intronic	35	0	0	26	7	26.92307692	0	0	NA	0	0	NA							0.196534454	0	0	0.803465546	1	0	0.196534454	unphased	0.306306787	1.558539896	0.196534454	0	0.0025	0.9975	0	0	0	0	3	4.73E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216219927	8	142117645	G	A	-	-	-	-	-	-	30	0	0	28	4	14.28571429	0	0	NA	0	0	NA							0.196534454	0	0	0.803465546	1	0	0.196534454	unphased	0.162530132	0.826980353	0.196534454	0	0.01625	0.98375	0	0	0	0	3	1.16E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216220169	8	144643534	T	A	GSDMD	CCDS34956.1	r.817-6u>a	c.683-6T>A	p.?	splice region	36	0	0	11	4	36.36363636	0	0	NA	0	0	NA							0.196534454	0	0	0.803465546	1	0	0.196534454	unphased	0.413713063	0.413713063	1	0.08125	0.7625	0.15625	0	0	0	0	2	2.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216220278	8	145985413	G	A	ZNF251	CCDS47944.1	r.?	-	-	upstream	26	0	0	53	12	22.64150943	0	0	NA	0	0	NA							0.196534454	0	0	0.803465546	1	0	0.196534454	unphased	0.257594926	1.310685843	0.196534454	0	0	1	0	0	0	0	3	5.39E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216220503	9	478390	G	A	KANK1	CCDS34976.1	r.?	-	-	intronic	37	0	0	106	58	54.71698113	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.79800222	0.949500555	4	0	0	1	0	0	0	0	3	1.08E-103	1	1	1	NA	NA	NA
1353824	PD9772b	1216220528	9	590310	C	A	KANK1	CCDS34976.1	r.?	-	-	intronic	43	0	0	115	65	56.52173913	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.923273657	0.980818414	4	0	0	1	0	0	0	0	3	2.47E-117	1	1	1	NA	NA	NA
1353824	PD9772b	1216220604	9	890137	G	A	DMRT1	CCDS6442.1	r.?	-	-	intronic	23	0	0	32	6	18.75	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	1.301470588	1.301470588	1	0.00125	0.0075	0.99	0.00125	0	0	0	3	1.27E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216221190	9	4048018	G	A	GLIS3	CCDS6451.1	r.?	-	-	intronic	38	0	0	104	62	59.61538462	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.13800905	1.034502262	4	0	0	1	0	0	0	0	3	4.11E-114	1	1	1	NA	NA	NA
1353824	PD9772b	1216222116	9	8504218	G	A	PTPRD	CCDS43786.1	r.?	-	-	intronic	33	0	0	140	77	55	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.817647059	0.954411765	4	0	0	1	0	0	0	0	3	2.27E-137	1	1	1	NA	NA	NA
1353824	PD9772b	1216222391	9	9666883	G	A	PTPRD	CCDS43786.1	r.?	-	-	intronic	34	0	0	104	57	54.80769231	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.804298643	0.951074661	4	0	0	1	0	0	0	0	3	5.41E-102	1	1	1	NA	NA	NA
1353824	PD9772b	1216222400	9	9760033	G	A	PTPRD	CCDS43786.1	r.?	-	-	intronic	36	0	0	98	55	56.12244898	231	0	0	462	230	49.78354978							6	5	1	1	NA	NA	NA	unphased	3.895558223	0.973889556	4	0	0	1	0	0	0	0	3	2.76E-99	1	0	1	YES	somatic	1_1
1353824	PD9772b	1216222601	9	10552997	T	A	PTPRD	CCDS43786.1	r.?	-	-	intronic	21	0	0	106	15	14.1509434	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	0.982241953	0.982241953	1	0	0.0025	0.9975	0	0	0	0	3	1.29E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216222663	9	10748091	T	A	-	-	-	-	-	-	35	0	0	111	66	59.45945946	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.12718601	1.031796502	4	0	0	1	0	0	0	0	3	2.94E-121	1	1	1	NA	NA	NA
1353824	PD9772b	1216223138	9	12426203	G	A	-	-	-	-	-	-	42	0	0	100	58	58	178	0	0	409	180	44.00977995							6	5	1	1	NA	NA	NA	unphased	4.025882353	1.006470588	4	0	0	1	0	0	0	0	3	7.97E-106	1	5.77E-295	1	YES	somatic	1_1
1353824	PD9772b	1216223632	9	14854436	C	A	FREM1	CCDS47952.1	r.?	-	-	intronic	40	0	0	68	25	36.76470588	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.816608997	0.908304498	2	0	0	1	0	0	0	0	3	6.41E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216223838	9	16143515	G	A	-	-	-	-	-	-	35	0	0	27	14	51.85185185	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.59912854	0.899782135	4	0	0.00625	0.99375	0	0	0	0	3	1.15E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216224279	9	18185220	C	A	-	-	-	-	-	-	29	0	0	108	64	59.25925926	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.11328976	1.02832244	4	0	0	1	0	0	0	0	3	1.71E-117	1	1	1	NA	NA	NA
1353824	PD9772b	1216224327	9	18531159	T	A	ADAMTSL1	CCDS47954.1	r.?	-	-	intronic	36	0	0	115	6	5.217391304	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	0.362148338	0.362148338	1	0.12125	0.54875	0.33	0	0	0	0	2	2.76E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216224643	9	19712448	C	A	SLC24A2	CCDS6493.1	r.?	-	-	intronic	32	0	0	107	53	49.53271028	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.438152831	0.859538208	4	0	0	1	0	0	0	0	3	1.06E-91	1	1	1	NA	NA	NA
1353824	PD9772b	1216225471	9	28421585	G	A	LINGO2	CCDS6524.1	r.?	-	-	intronic	30	0	0	106	66	62.26415094	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.321864595	1.080466149	4	0	0	1	0	0	0	0	3	2.87E-123	1	1	1	NA	NA	NA
1353824	PD9772b	1216225603	9	29016275	C	A	-	-	-	-	-	-	40	0	0	112	63	56.25	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.904411765	0.976102941	4	0	0	1	0	0	0	0	3	1.39E-113	1	1	1	NA	NA	NA
1353824	PD9772b	1216225722	9	29509132	C	A	-	-	-	-	-	-	38	0	0	105	61	58.0952381	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.032492997	1.008123249	4	0	0	1	0	0	0	0	3	2.80E-111	1	1	1	NA	NA	NA
1353824	PD9772b	1216225792	9	29904355	T	A	-	-	-	-	-	-	21	0	0	133	24	18.04511278	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	1.252543123	1.252543123	1	0	0	1	0	0	0	0	3	5.86E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216227221	9	36122168	G	A	RECK	CCDS6597.1	r.?	-	-	intronic	33	0	0	79	53	67.08860759	255	2	0.784313725	128	59	46.09375							4.816361473	4	0	0.183638527	4	1	0.816361473	unphased	3.862652038	0.96566301	4	0	0	1	0	0	0	0	3	5.07E-102	1	2.01E-99	0.364539783	YES	somatic	1_1
1353824	PD9772b	1216228922	9	46850931	G	A	-	-	-	-	-	-	13	0	0	15	7	46.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.305882353	1.152941176	2	0	0.005	0.995	0	0	0	0	3	4.85E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216234679	9	69233631	T	A	CBWD6	CCDS43827.1	r.?	-	-	intronic	6	0	0	9	3	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	1.647058824	1	0.00125	0.0125	0.98625	0	0	0	0	3	1.03E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216235956	9	71095114	C	A	PGM5	CCDS6622.2	r.?	-	-	intronic	41	0	0	40	12	30	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.482352941	1.482352941	1	0	0	1	0	0	0	0	3	1.20E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216236287	9	72991952	C	A	-	-	-	-	-	-	35	0	0	76	9	11.84210526	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.585139319	0.585139319	1	0.005	0.115	0.88	0	0	0	0	3	2.06E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216236338	9	73480947	C	A	TRPM3	CCDS43835.1	r.?	-	-	intronic	34	0	0	92	20	21.73913043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.074168798	1.074168798	1	0	0	1	0	0	0	0	3	5.65E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216236834	9	76778191	C	A	-	-	-	-	-	-	34	0	0	56	9	16.07142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.794117647	0.794117647	1	0	0.02375	0.97625	0	0	0	0	3	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216236852	9	76893070	T	A	-	-	-	-	-	-	36	0	0	75	12	16	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0	0.015	0.985	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216237182	9	79381621	C	A	PRUNE2	CCDS47982.1	r.?	-	-	intronic	38	0	0	92	19	20.65217391	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.020460358	1.020460358	1	0	0	1	0	0	0	0	3	3.08E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216237183	9	79381622	C	A	PRUNE2	CCDS47982.1	r.?	-	-	intronic	37	0	0	91	19	20.87912088	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.031674208	1.031674208	1	0	0.00125	0.99875	0	0	0	0	3	2.46E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216237210	9	79617866	C	A	-	-	-	-	-	-	28	0	0	63	15	23.80952381	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.176470588	1.176470588	1	0	0	1	0	0	0	0	3	2.97E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216237525	9	81976400	T	A	-	-	-	-	-	-	26	0	0	52	7	13.46153846	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.665158371	0.665158371	1	0.0025	0.0475	0.95	0	0	0	0	3	8.58E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216237645	9	83081306	T	A	-	-	-	-	-	-	41	0	0	88	16	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0	1	0	0	0	0	3	1.57E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216237868	9	84365768	T	A	-	-	-	-	-	-	40	0	0	25	4	16	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0.0025	0.0275	0.97	0	0	0	0	3	7.27E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216237961	9	85250000	G	A	-	-	-	-	-	-	32	0	0	71	13	18.30985915	322	0	0	421	67	15.91448931							4	2	2	1	NA	NA	NA	unphased	0.904722452	0.904722452	1	0	0.01	0.99	0	0	0	0	3	5.42E-17	1	8.42E-77	1	YES	somatic	1_1
1353824	PD9772b	1216237965	9	85294896	C	A	-	-	-	-	-	-	35	0	0	88	24	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	1.03E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216238039	9	85659913	C	A	RASEF	CCDS6662.1	r.?	-	-	intronic	43	0	0	71	20	28.16901408	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.391880696	1.391880696	1	0	0	1	0	0	0	0	3	1.68E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216238483	9	88931507	C	A	ZCCHC6	CCDS35057.1	r.?	-	-	intronic	41	0	0	77	9	11.68831169	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.577540107	0.577540107	1	0.0025	0.1225	0.875	0	0	0	0	3	2.32E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216238529	9	89240937	G	A	-	-	-	-	-	-	35	0	0	89	24	26.96629213	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.332452082	1.332452082	1	0	0	1	0	0	0	0	3	1.41E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216238763	9	90977081	G	A	-	-	-	-	-	-	39	0	0	17	4	23.52941176	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0.0125	0.9875	0	0	0	0	3	1.41E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216238881	9	92027530	G	A	SEMA4D	CCDS6685.1	r.?	-	-	intronic	20	0	0	65	14	21.53846154	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.064253394	1.064253394	1	0	0	1	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216238882	9	92027531	C	A	SEMA4D	CCDS6685.1	r.?	-	-	intronic	18	0	0	65	14	21.53846154	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.064253394	1.064253394	1	0	0.00125	0.99875	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216239737	9	100120239	C	A	KIAA1529	CCDS35077.1	r.?	-	-	intronic	31	0	0	67	12	17.91044776	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.884986831	0.884986831	1	0	0.005	0.995	0	0	0	0	3	1.14E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216239767	9	100490853	C	A	-	-	-	-	-	-	37	0	0	46	7	15.2173913	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.904092072	0.904092072	1	0	0.01125	0.98875	0	0	0	0	3	3.53E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216239865	9	101024837	C	A	-	-	-	-	-	-	28	0	0	87	12	13.79310345	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.819472617	0.819472617	1	0.00125	0.0125	0.98625	0	0	0	0	3	3.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216239992	9	101787121	C	A	COL15A1	CCDS35081.1	r.?	-	-	intronic	44	0	0	67	7	10.44776119	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.62071993	0.62071993	1	0.00125	0.075	0.92375	0	0	0	0	3	5.23E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216239993	9	101787122	C	A	COL15A1	CCDS35081.1	r.?	-	-	intronic	46	0	0	67	8	11.94029851	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.709394205	0.709394205	1	0	0.03625	0.96375	0	0	0	0	3	1.96E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216240070	9	102367258	C	A	-	-	-	-	-	-	35	0	0	93	17	18.27956989	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.086021505	1.086021505	1	0	0	1	0	0	0	0	3	9.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216240606	9	106073003	T	A	-	-	-	-	-	-	44	0	0	76	7	9.210526316	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.547213622	0.547213622	1	0.00625	0.13375	0.86	0	0	0	0	3	1.26E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216241101	9	109191992	C	A	-	-	-	-	-	-	31	0	0	96	27	28.125	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.670955882	0.835477941	2	0	0.00125	0.99875	0	0	0	0	3	2.84E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216241171	9	109570470	C	A	-	-	-	-	-	-	25	0	0	81	12	14.81481481	1	0	0	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.880174292	0.880174292	1	0	0.0075	0.9925	0	0	0	0	3	1.26E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216241412	9	110904768	G	A	-	-	-	-	-	-	31	0	0	59	10	16.94915254	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.006979063	1.006979063	1	0	0.0025	0.9975	0	0	0	0	3	4.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216241512	9	111370687	T	A	-	-	-	-	-	-	30	0	0	97	12	12.37113402	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.734990904	0.734990904	1	0.00125	0.025	0.97375	0	0	0	0	3	1.18E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216241525	9	111415810	C	A	-	-	-	-	-	-	41	0	0	89	20	22.47191011	1	0	0	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.335095836	1.335095836	1	0	0	1	0	0	0	0	3	2.72E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216241548	9	111623660	G	A	ACTL7A	CCDS6772.1	r.?	-	-	upstream	36	0	0	82	12	14.63414634	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.869440459	0.869440459	1	0	0.005	0.995	0	0	0	0	3	1.46E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216241817	9	113030304	C	A	-	-	-	-	-	-	31	0	0	79	19	24.05063291	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.428890544	1.428890544	1	0	0	1	0	0	0	0	3	1.27E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216242006	9	113882278	G	A	-	-	-	-	-	-	42	0	0	80	15	18.75	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.113970588	1.113970588	1	0	0.00125	0.99875	0	0	0	0	3	1.49E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216242021	9	113968014	G	A	-	-	-	-	-	-	32	0	0	109	18	16.51376147	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.981111711	0.981111711	1	0	0.0025	0.9975	0	0	0	0	3	4.13E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216242951	9	120563518	G	A	-	-	-	-	-	-	46	0	0	72	13	18.05555556	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.711601307	0.711601307	1	0.00125	0.03375	0.965	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216243057	9	121575166	C	A	-	-	-	-	-	-	36	0	0	47	11	23.40425532	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.922403004	0.922403004	1	0	0.005	0.995	0	0	0	0	3	7.21E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216243192	9	123153081	C	A	CDK5RAP2	CCDS6823.1	r.?	-	-	intronic	38	0	0	30	5	16.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.656862745	0.656862745	1	0.0025	0.04875	0.94875	0	0	0	0	3	4.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216243517	9	126571271	T	A	DENND1A	CCDS35133.1	r.?	-	-	intronic	37	0	0	47	7	14.89361702	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.58698373	0.58698373	1	0.00375	0.09125	0.905	0	0	0	0	3	4.12E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216244149	9	134617740	G	A	RAPGEF1	CCDS48047.1	r.?	-	-	upstream	38	0	0	31	15	48.38709677	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.907020873	0.953510436	2	0	0	1	0	0	0	0	3	8.51E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216244870	X	3448899	C	A	-	-	-	-	-	-	44	0	0	76	23	30.26315789	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	1.58E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216244873	X	3458522	G	A	-	-	-	-	-	-	53	1	1.886792453	70	19	27.14285714	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	9.50E-28	0.233303855	1	1	NA	NA	NA
1353824	PD9772b	1216245024	X	4624141	C	A	-	-	-	-	-	-	44	0	0	70	7	10	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	7.11E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216245057	X	4809366	C	A	-	-	-	-	-	-	26	0	0	86	10	11.62790698	0	0	NA	1	0	0							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	2.45E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216245148	X	5231292	T	A	-	-	-	-	-	-	36	0	0	51	6	11.76470588	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.581314879	0.581314879	1	0.0075	0.07125	0.92125	0	0	0	0	3	2.32E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216245865	X	10163947	G	A	CLCN4	CCDS14137.1	r.?	-	-	intronic	43	0	0	101	18	17.82178218	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.880605708	0.880605708	1	0	0.0025	0.9975	0	0	0	0	3	9.60E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216245947	X	10883548	G	A	-	-	-	-	-	-	35	0	0	85	20	23.52941176	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0	1	0	0	0	0	3	9.82E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216245988	X	11586631	C	A	ARHGAP6	CCDS14140.1	r.?	-	-	intronic	26	0	0	43	9	20.93023256	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.034199726	1.034199726	1	0	0.00375	0.99625	0	0	0	0	3	9.45E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216246278	X	14537874	C	A	-	-	-	-	-	-	38	0	0	58	14	24.13793103	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.951318458	0.951318458	1	0	0.00125	0.99875	0	0	0	0	3	5.04E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216246633	X	18888479	T	A	-	-	-	-	-	-	26	0	0	38	17	44.73684211	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.763157895	0.881578947	2	0	0.0025	0.9975	0	0	0	0	3	1.99E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216246756	X	20453716	G	A	-	-	-	-	-	-	35	0	0	59	21	35.59322034	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.402791625	0.701395813	2	0	0.03625	0.96375	0	0	0	0	3	2.06E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216246774	X	20892590	C	A	-	-	-	-	-	-	30	0	0	12	3	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0.00125	0.0175	0.98125	0	0	0	0	3	2.66E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216246800	X	21370592	T	A	-	-	-	-	-	-	30	0	0	63	23	36.50793651	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.438842204	0.719421102	2	0	0.025	0.975	0	0	0	0	3	9.25E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216247146	X	24759520	G	A	POLA1	CCDS14214.1	r.2242g>a	c.2227G>A	p.E743K	missense	26	0	0	60	18	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0	1	0	0	0	0	3	2.89E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216247244	X	26211944	T	A	MAGEB6	CCDS14217.1	r.130u>a	c.?	p.?	5'UTR variant	38	0	0	22	6	27.27272727	29	0	0	11	0	0							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0.00875	0.99125	0	0	0	0	3	1.09E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216247271	X	26632426	G	A	-	-	-	-	-	-	36	0	0	68	25	36.76470588	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.448961938	0.724480969	2	0	0.02875	0.97125	0	0	0	0	3	6.41E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216247292	X	26963920	T	A	-	-	-	-	-	-	33	0	0	65	17	26.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.030769231	1.030769231	1	0	0.00125	0.99875	0	0	0	0	3	1.14E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216247396	X	28239801	C	A	-	-	-	-	-	-	28	0	0	50	12	24	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.945882353	0.945882353	1	0	0.0075	0.9925	0	0	0	0	3	2.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216248017	X	35053135	G	A	-	-	-	-	-	-	32	0	0	55	18	32.72727273	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.289839572	1.289839572	1	0	0	1	0	0	0	0	3	4.61E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216248053	X	35583070	G	A	-	-	-	-	-	-	30	0	0	43	12	27.90697674	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.099863201	1.099863201	1	0	0	1	0	0	0	0	3	3.24E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216248296	X	38309800	T	A	ENSG00000250349	ENST00000465127	r.?	-	-	intronic	26	0	0	66	22	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	3.52E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216248573	X	41542268	G	A	CASK	CCDS48095.1	r.?	-	-	intronic	29	0	0	46	8	17.39130435	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.685421995	0.685421995	1	0	0.04125	0.95875	0	0	0	0	3	8.61E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216248829	X	44537579	C	A	-	-	-	-	-	-	23	0	0	51	9	17.64705882	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.69550173	0.69550173	1	0	0.02875	0.97125	0	0	0	0	3	4.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216248939	X	46091472	C	A	-	-	-	-	-	-	42	0	0	55	10	18.18181818	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.71657754	0.71657754	1	0	0.02375	0.97625	0	0	0	0	3	2.33E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216249107	X	47955705	G	A	-	-	-	-	-	-	33	0	0	26	4	15.38461538	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.606334842	0.606334842	1	0.00625	0.0575	0.93625	0	0	0	0	3	8.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216249288	X	50426544	G	A	SHROOM4	CCDS35277.1	r.?	-	-	intronic	32	0	0	62	23	37.09677419	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.462049336	0.731024668	2	0	0.01625	0.98375	0	0	0	0	3	5.90E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216249413	X	51869248	T	A	-	-	-	-	-	-	25	0	0	76	10	13.15789474	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.650154799	0.650154799	1	0	0.065	0.935	0	0	0	0	3	6.90E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216249589	X	53759798	G	A	-	-	-	-	-	-	39	0	0	100	21	21	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.037647059	1.037647059	1	0	0	1	0	0	0	0	3	6.67E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216249629	X	54013949	C	A	PHF8	CCDS14355.1	r.?	-	-	intronic	28	0	0	54	16	29.62962963	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.464052288	1.464052288	1	0	0	1	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216249693	X	54578486	G	A	GNL3L	CCDS14360.1	r.?	-	-	intronic	32	0	0	21	6	28.57142857	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0.00375	0.99625	0	0	0	0	3	7.95E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216249698	X	54630375	G	A	-	-	-	-	-	-	35	0	0	69	9	13.04347826	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.644501279	0.644501279	1	0	0.05625	0.94375	0	0	0	0	3	8.45E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216249716	X	54730496	T	A	-	-	-	-	-	-	24	0	0	82	19	23.17073171	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.144906743	1.144906743	1	0	0	1	0	0	0	0	3	2.79E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216249742	X	54971866	C	A	PFKFB1	CCDS14364.1	r.1169+6g>u	c.1098+6G>T	p.?	splice region	29	0	0	65	13	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00375	0.99625	0	0	0	0	3	1.57E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216250054	X	57565550	C	A	-	-	-	-	-	-	26	0	0	103	16	15.53398058	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.767561393	0.767561393	1	0	0.01625	0.98375	0	0	0	0	3	2.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216251289	X	62344055	C	A	-	-	-	-	-	-	38	0	0	77	11	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0	0.02625	0.97375	0	0	0	0	3	2.41E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216251318	X	62608643	C	A	-	-	-	-	-	-	30	0	0	53	16	30.18867925	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.491675916	1.491675916	1	0	0	1	0	0	0	0	3	1.90E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216251348	X	62933192	C	A	ARHGEF9	CCDS35315.1	r.?	-	-	intronic	38	0	0	86	13	15.11627907	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.746922025	0.746922025	1	0	0.0075	0.9925	0	0	0	0	3	7.57E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216251471	X	63993974	G	A	-	-	-	-	-	-	24	0	0	68	14	20.58823529	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.017301038	1.017301038	1	0	0.00125	0.99875	0	0	0	0	3	5.84E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216251544	X	64633259	G	A	-	-	-	-	-	-	36	0	0	78	13	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.015	0.985	0	0	0	0	3	1.99E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216251589	X	65022296	G	A	-	-	-	-	-	-	14	0	0	33	10	30.3030303	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.497326203	1.497326203	1	0	0	1	0	0	0	0	3	8.14E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216251590	X	65024905	C	A	-	-	-	-	-	-	34	0	0	89	23	25.84269663	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.276933245	1.276933245	1	0	0	1	0	0	0	0	3	1.02E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216251752	X	66159172	C	A	-	-	-	-	-	-	29	0	0	61	9	14.75409836	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.729026037	0.729026037	1	0.00125	0.03	0.96875	0	0	0	0	3	2.68E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216251948	X	67697482	C	A	-	-	-	-	-	-	40	0	0	43	9	20.93023256	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.034199726	1.034199726	1	0	0.00125	0.99875	0	0	0	0	3	9.45E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216252223	X	69798583	T	A	TEX11	CCDS35323.1	r.?	-	-	intronic	32	0	0	53	7	13.20754717	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.652608213	0.652608213	1	0.00125	0.05125	0.9475	0	0	0	0	3	9.85E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216252299	X	70252538	C	A	-	-	-	-	-	-	38	0	0	89	16	17.97752809	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.888301388	0.888301388	1	0	0.0025	0.9975	0	0	0	0	3	1.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216252464	X	71792798	C	A	HDAC8	CCDS14420.1	r.156g>u	c.?	p.?	5'UTR variant	30	0	0	47	10	21.27659574	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.051314143	1.051314143	1	0	0.005	0.995	0	0	0	0	3	4.27E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216252476	X	71906857	T	A	PHKA1	CCDS48137.1	r.?	-	-	intronic	43	0	0	81	17	20.98765432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.037037037	1.037037037	1	0	0.00125	0.99875	0	0	0	0	3	7.24E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216252690	X	73905642	T	A	-	-	-	-	-	-	25	0	0	86	17	19.76744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976744186	0.976744186	1	0	0	1	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216252704	X	74017905	C	A	KIAA2022	CCDS35337.1	r.?	-	-	intronic	34	0	0	86	12	13.95348837	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.689466484	0.689466484	1	0	0.0425	0.9575	0	0	0	0	3	2.65E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216252978	X	76902208	G	A	ATRX	CCDS14434.1	r.?	-	-	intronic	20	0	0	58	15	25.86206897	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.277890467	1.277890467	1	0	0	1	0	0	0	0	3	7.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216252984	X	76942600	G	A	ATRX	CCDS14434.1	r.?	-	-	intronic	24	0	0	36	9	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.63E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216253017	X	77167471	C	A	ATP7A	CCDS35339.1	r.?	-	-	intronic	40	0	0	46	10	21.73913043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.074168798	1.074168798	1	0	0.00875	0.99125	0	0	0	0	3	3.38E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216253110	X	77911043	C	A	ZCCHC5	CCDS14440.1	r.?	-	-	downstream	21	0	0	69	13	18.84057971	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.930946292	0.930946292	1	0	0.00375	0.99625	0	0	0	0	3	3.64E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216253137	X	78144917	C	A	-	-	-	-	-	-	31	0	0	79	15	18.98734177	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.938198064	0.938198064	1	0	0.00125	0.99875	0	0	0	0	3	1.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216253157	X	78292572	C	A	-	-	-	-	-	-	35	0	0	61	12	19.67213115	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.972034716	0.972034716	1	0	0	1	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216253421	X	80329328	T	A	-	-	-	-	-	-	31	0	0	84	19	22.61904762	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.117647059	1.117647059	1	0	0	1	0	0	0	0	3	4.62E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216253434	X	80468238	G	A	SH3BGRL	CCDS14449.1	r.?	-	-	intronic	28	0	0	64	15	23.4375	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.158088235	1.158088235	1	0	0	1	0	0	0	0	3	3.87E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216253530	X	81312815	G	A	-	-	-	-	-	-	26	0	0	64	13	20.3125	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.003676471	1.003676471	1	0	0.00375	0.99625	0	0	0	0	3	1.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216253600	X	82388115	C	A	-	-	-	-	-	-	35	0	0	49	10	20.40816327	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.008403361	1.008403361	1	0	0.00375	0.99625	0	0	0	0	3	6.72E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216253702	X	83499424	G	A	-	-	-	-	-	-	36	0	0	83	11	13.25301205	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.654854713	0.654854713	1	0.00125	0.0475	0.95125	0	0	0	0	3	5.66E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216253722	X	83651860	G	A	HDX	CCDS35342.1	r.?	-	-	intronic	32	0	0	41	9	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0.00625	0.99375	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216253755	X	83852167	G	A	-	-	-	-	-	-	41	0	0	80	10	12.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.617647059	0.617647059	1	0.00125	0.09875	0.9	0	0	0	0	3	1.17E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216253781	X	84082768	T	A	-	-	-	-	-	-	35	0	0	78	20	25.64102564	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.266968326	1.266968326	1	0	0	1	0	0	0	0	3	1.43E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216254258	X	87966381	C	A	-	-	-	-	-	-	32	0	0	96	20	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0	1	0	0	0	0	3	1.43E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216254282	X	88102229	T	A	-	-	-	-	-	-	26	0	0	88	13	14.77272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.729946524	0.729946524	1	0	0.02875	0.97125	0	0	0	0	3	1.03E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216254320	X	88376105	C	A	-	-	-	-	-	-	35	0	0	58	19	32.75862069	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.618661258	0.809330629	2	0	0.00625	0.99375	0	0	0	0	3	1.50E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216254330	X	88454415	T	A	-	-	-	-	-	-	33	0	0	68	11	16.17647059	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.799307958	0.799307958	1	0	0.01125	0.98875	0	0	0	0	3	5.76E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216254563	X	89925630	C	A	-	-	-	-	-	-	26	0	0	67	10	14.92537313	0	0	NA	0	0	NA							4.615834634	2	2	0.384165366	3	2	0.615834634	unphased	0.829404642	0.829404642	1	0.00125	0.01125	0.9875	0	0	0	0	3	1.87E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216254848	X	92657086	T	A	-	-	-	-	-	-	31	0	0	47	8	17.0212766	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.841051314	0.841051314	1	0	0.01625	0.98375	0	0	0	0	3	1.03E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216255016	X	94034326	G	A	-	-	-	-	-	-	25	0	0	73	17	23.28767123	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.150684932	1.150684932	1	0	0	1	0	0	0	0	3	1.03E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216255086	X	94497051	G	A	-	-	-	-	-	-	33	0	0	77	15	19.48051948	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.962566845	0.962566845	1	0	0.0025	0.9975	0	0	0	0	3	8.05E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216255100	X	94575403	C	A	-	-	-	-	-	-	40	0	0	69	10	14.49275362	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.716112532	0.716112532	1	0	0.03	0.97	0	0	0	0	3	2.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216255340	X	96233634	T	A	DIAPH2	CCDS14467.1	r.?	-	-	intronic	35	0	0	70	19	27.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.341176471	1.341176471	1	0	0	1	0	0	0	0	3	9.50E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216255589	X	98351540	G	A	-	-	-	-	-	-	36	0	0	73	12	16.43835616	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.812248187	0.812248187	1	0	0.01375	0.98625	0	0	0	0	3	3.39E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216255622	X	98615294	T	A	-	-	-	-	-	-	32	0	0	75	8	10.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.527058824	0.527058824	1	0.01375	0.19875	0.7875	0	0	0	0	3	4.89E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216255665	X	99079501	T	A	-	-	-	-	-	-	35	0	0	78	18	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	6.10E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216255730	X	99466249	G	A	-	-	-	-	-	-	29	0	0	86	17	19.76744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976744186	0.976744186	1	0	0.00125	0.99875	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216256071	X	102574054	G	A	-	-	-	-	-	-	43	0	0	92	12	13.04347826	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.644501279	0.644501279	1	0.00125	0.075	0.92375	0	0	0	0	3	6.12E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216256212	X	103663965	T	A	-	-	-	-	-	-	39	0	0	71	16	22.53521127	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.113504557	1.113504557	1	0	0	1	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216256280	X	104310009	G	A	IL1RAPL2	CCDS14517.1	r.?	-	-	intronic	33	0	0	83	17	20.48192771	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.012048193	1.012048193	1	0	0.00625	0.99375	0	0	0	0	3	1.14E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216256633	X	107625078	T	A	COL4A6	CCDS14542.1	r.?	-	-	intronic	35	0	0	83	15	18.07228916	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.8929837	0.8929837	1	0	0.005	0.995	0	0	0	0	3	2.70E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216256643	X	107741531	C	A	COL4A5	CCDS35366.1	r.?	-	-	intronic	29	0	0	69	13	18.84057971	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.930946292	0.930946292	1	0	0.00625	0.99375	0	0	0	0	3	3.64E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216256645	X	107753923	G	A	COL4A5	CCDS35366.1	r.?	-	-	intronic	31	0	0	85	16	18.82352941	0	0	NA	2	2	100							4	2	2	1	NA	NA	NA	unphased	0.930103806	0.930103806	1	0	0.00125	0.99875	0	0	0	0	3	8.67E-21	1	2.50E-05	1	NA	NA	NA
1353824	PD9772b	1216256687	X	108193465	T	A	-	-	-	-	-	-	24	0	0	52	12	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	4.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216256823	X	109185498	G	A	-	-	-	-	-	-	35	0	0	86	21	24.41860465	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.206566347	1.206566347	1	0	0	1	0	0	0	0	3	2.01E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216257081	X	111819330	C	A	-	-	-	-	-	-	26	0	0	65	8	12.30769231	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.608144796	0.608144796	1	0.00125	0.05875	0.94	0	0	0	0	3	1.53E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216257101	X	112001137	C	A	-	-	-	-	-	-	39	0	0	76	11	14.47368421	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.715170279	0.715170279	1	0.00125	0.03125	0.9675	0	0	0	0	3	2.08E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216257193	X	112699685	G	A	-	-	-	-	-	-	25	0	0	80	23	28.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.420588235	0.710294118	2	0	0.03	0.97	0	0	0	0	3	6.19E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216257729	X	116655140	C	A	-	-	-	-	-	-	37	0	0	86	12	13.95348837	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.689466484	0.689466484	1	0	0.0375	0.9625	0	0	0	0	3	2.65E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216257733	X	116718760	C	A	-	-	-	-	-	-	34	0	0	67	10	14.92537313	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.737489025	0.737489025	1	0	0.0275	0.9725	0	0	0	0	3	1.87E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216258157	X	120203148	T	A	-	-	-	-	-	-	46	0	0	43	16	37.20930233	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.838577291	0.919288646	2	0	0.00125	0.99875	0	0	0	0	3	3.56E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216258445	X	122849761	C	A	THOC2	CCDS43988.1	r.?	-	-	intronic	37	0	0	61	16	26.2295082	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.296046287	1.296046287	1	0	0	1	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216258540	X	123451025	T	A	-	-	-	-	-	-	45	0	0	78	10	12.82051282	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.633484163	0.633484163	1	0.00125	0.0725	0.92625	0	0	0	0	3	9.02E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216258546	X	123503173	G	A	SH2D1A	CCDS48162.1	r.?	-	-	intronic	38	0	0	74	16	21.62162162	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06836248	1.06836248	1	0	0.00125	0.99875	0	0	0	0	3	7.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216258651	X	124602178	G	A	-	-	-	-	-	-	33	0	0	87	22	25.28735632	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.249492901	1.249492901	1	0	0	1	0	0	0	0	3	3.97E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216258731	X	125245148	C	A	-	-	-	-	-	-	31	0	0	60	7	11.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.576470588	0.576470588	1	0.0025	0.10625	0.89125	0	0	0	0	3	2.39E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216258923	X	126823860	C	A	-	-	-	-	-	-	26	0	0	66	11	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.00625	0.99375	0	0	0	0	3	4.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216258948	X	127052237	G	A	-	-	-	-	-	-	35	0	0	56	11	19.64285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.970588235	0.970588235	1	0	0	1	0	0	0	0	3	5.91E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216259027	X	127816710	T	A	-	-	-	-	-	-	44	0	0	100	19	19	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.938823529	0.938823529	1	0	0	1	0	0	0	0	3	1.72E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216259077	X	128175729	C	A	-	-	-	-	-	-	32	0	0	8	3	37.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.852941176	1.852941176	1	0.00125	0.01	0.98875	0	0	0	0	3	6.87E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216259273	X	130235254	G	A	-	-	-	-	-	-	37	0	0	71	14	19.71830986	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.974316487	0.974316487	1	0	0	1	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216259343	X	130775265	G	A	-	-	-	-	-	-	27	0	0	82	17	20.73170732	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.024390244	1.024390244	1	0	0	1	0	0	0	0	3	9.09E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216259392	X	131260787	C	A	FRMD7	CCDS35397.1	r.?	-	-	intronic	42	0	0	69	17	24.63768116	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.217391304	1.217391304	1	0	0.00125	0.99875	0	0	0	0	3	3.56E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216259446	X	131942609	C	A	HS6ST2	CCDS48169.1	r.?	-	-	intronic	41	0	0	88	18	20.45454545	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.010695187	1.010695187	1	0	0.00125	0.99875	0	0	0	0	3	6.62E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216259583	X	133438965	G	A	-	-	-	-	-	-	30	0	0	70	14	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.0025	0.9975	0	0	0	0	3	9.08E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216259706	X	134500653	C	A	ZNF449	CCDS14649.1	r.?	-	-	downstream	37	0	0	36	12	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	0.823529412	2	0	0.01	0.99	0	0	0	0	3	2.73E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216260140	X	138106249	G	A	FGF13	ENST00000436198	r.?	-	-	intronic	36	0	0	63	9	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.0275	0.97125	0	0	0	0	3	3.62E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216260199	X	138492633	T	A	-	-	-	-	-	-	31	0	0	71	16	22.53521127	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	1.113504557	1.113504557	1	0	0	1	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216260200	X	138492634	C	A	-	-	-	-	-	-	31	0	0	73	16	21.91780822	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	1.082997583	1.082997583	1	0	0	1	0	0	0	0	3	6.15E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216260376	X	139791756	G	A	ENSG00000203930	ENST00000370535	r.?	-	-	upstream	39	0	0	84	13	15.47619048	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.005	0.995	0	0	0	0	3	5.49E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216260381	X	139823335	T	A	-	-	-	-	-	-	43	0	0	53	12	22.64150943	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.118756937	1.118756937	1	0	0	1	0	0	0	0	3	5.39E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216260401	X	139924862	T	A	-	-	-	-	-	-	32	0	0	69	12	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.00375	0.99625	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216260506	X	140924534	C	A	MAGEC3	CCDS14676.1	r.?	-	-	upstream	37	0	0	46	13	28.26086957	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.396419437	1.396419437	1	0	0	1	0	0	0	0	3	1.07E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216260574	X	141487264	T	A	-	-	-	-	-	-	45	0	0	54	11	20.37037037	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.006535948	1.006535948	1	0	0.0025	0.9975	0	0	0	0	3	3.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216260729	X	142899712	C	A	-	-	-	-	-	-	34	0	0	91	16	17.58241758	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.868778281	0.868778281	1	0	0.00375	0.99625	0	0	0	0	3	2.79E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216260805	X	143569646	C	A	-	-	-	-	-	-	33	0	0	71	8	11.26760563	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.556752278	0.556752278	1	0.00375	0.13625	0.86	0	0	0	0	3	3.14E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216260857	X	143892089	C	A	-	-	-	-	-	-	27	0	0	75	11	14.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.724705882	0.724705882	1	0	0.02125	0.97875	0	0	0	0	3	1.78E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216260900	X	144158000	G	A	-	-	-	-	-	-	31	0	0	48	6	12.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.617647059	0.617647059	1	0.00625	0.0525	0.94125	0	0	0	0	3	1.60E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216261063	X	145785020	C	A	-	-	-	-	-	-	28	0	0	59	12	20.33898305	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.004985045	1.004985045	1	0	0.00375	0.99625	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216261144	X	146381080	G	A	-	-	-	-	-	-	43	0	0	109	18	16.51376147	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	0.815974096	0.815974096	1	0	0.00625	0.99375	0	0	0	0	3	4.13E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216261150	X	146455197	T	A	-	-	-	-	-	-	58	0	0	54	10	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.00875	0.99125	0	0	0	0	3	1.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216261167	X	146564140	G	A	-	-	-	-	-	-	47	0	0	86	15	17.44186047	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.861833105	0.861833105	1	0	0.005	0.995	0	0	0	0	3	4.76E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216261356	X	148202075	G	A	-	-	-	-	-	-	32	0	0	44	15	34.09090909	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.02540107	1.012700535	2	0	0	1	0	0	0	0	3	6.12E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216261447	X	148962734	C	A	-	-	-	-	-	-	27	0	0	76	7	9.210526316	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.547213622	0.547213622	1	0.0075	0.12	0.8725	0	0	0	0	3	1.26E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216261566	X	149790515	T	A	MTM1	CCDS14694.1	r.?	-	-	intronic	33	0	0	69	8	11.5942029	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.688832055	0.688832055	1	0.00125	0.035	0.96375	0	0	0	0	3	2.49E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216261704	X	150845426	T	A	PASD1	CCDS35431.1	r.?	-	-	downstream	22	0	0	44	11	25	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.485294118	1.485294118	1	0	0	1	0	0	0	0	3	3.22E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216261798	X	151669887	C	A	-	-	-	-	-	-	40	0	0	104	13	12.5	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.742647059	0.742647059	1	0	0.01625	0.98375	0	0	0	0	3	9.78E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216261839	X	152071627	G	A	-	-	-	-	-	-	39	0	0	28	10	35.71428571	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.121848739	1.06092437	2	0	0	1	0	0	0	0	3	1.18E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216262028	X	154260241	C	A	FUNDC2	CCDS14763.1	r.?	-	-	intronic	29	0	0	49	20	40.81632653	0	0	NA	1	1	100							5	3	2	1	NA	NA	NA	unphased	2.424969988	0.808323329	3	0	0.00375	0.99625	0	0	0	0	3	2.35E-33	1	0.005	1	NA	NA	NA
1353824	PD9772b	1215834738	1	2182521	T	C	SKI	CCDS39.1	r.?	-	-	intronic	29	0	0	8	3	37.5	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.782741495	0.782741495	1	0.00375	0.03	0.96625	0	0	0	0	3	6.87E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215834838	1	2761035	T	C	-	-	-	-	-	-	32	0	0	81	33	40.74074074	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.850385822	0.850385822	1	0	0	1	0	0	0	0	3	4.96E-54	1	1	1	NA	NA	NA
1353824	PD9772b	1215834857	1	3061598	G	C	PRDM16	CCDS44048.1	r.?	-	-	intronic	28	0	0	9	5	55.55555556	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	1.159617029	1.159617029	1	0	0.00125	0.99875	0	0	0	0	3	3.87E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215834971	1	4667902	T	C	-	-	-	-	-	-	28	0	0	70	47	67.14285714	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	1.40148001	1.40148001	1	0	0	0.99875	0.00125	0	0	0	3	1.14E-90	1	1	1	NA	NA	NA
1353824	PD9772b	1215835540	1	8624011	T	C	RERE	CCDS41243.1	r.?	-	-	intronic	30	0	0	75	28	37.33333333	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.779262644	0.779262644	1	0	0.005	0.995	0	0	0	0	3	9.34E-45	1	1	1	NA	NA	NA
1353824	PD9772b	1215835824	1	11004500	G	C	C1orf127	ENST00000377008	r.?	-	-	downstream	35	0	0	18	5	27.77777778	145	0	0	15	3	20							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.579808515	0.579808515	1	0.01125	0.1	0.88875	0	0	0	0	3	2.54E-08	1	5.44E-05	1	NA	NA	NA
1353824	PD9772b	1215835958	1	12097034	A	C	MIIP	CCDS143.1	r.?	-	-	downstream	19	0	0	23	6	26.08695652	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.544515822	0.544515822	1	0.00625	0.1725	0.82125	0	0	0	0	3	1.47E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215835988	1	12285839	T	C	VPS13D	CCDS30588.1	r.?	-	-	upstream	26	0	0	43	14	32.55813953	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.679589515	0.679589515	1	0	0.065	0.935	0	0	0	0	3	4.18E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215837379	1	19789887	G	C	CAPZB	ENST00000264203	r.?	-	-	intronic	35	0	0	45	23	51.11111111	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	1.066847667	1.066847667	1	0	0	1	0	0	0	0	3	4.42E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1215838515	1	30356527	A	C	-	-	-	-	-	-	33	0	0	43	15	34.88372093	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	1.025991792	1.025991792	1	0	0.00125	0.99875	0	0	0	0	3	4.05E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215838610	1	31412779	G	C	PUM1	CCDS44099.1	r.?	-	-	intronic	41	0	0	61	13	21.31147541	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.6268081	0.6268081	1	0.00125	0.10375	0.895	0	0	0	0	3	6.41E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215839115	1	35144820	A	C	-	-	-	-	-	-	35	0	0	89	20	22.47191011	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.660938533	0.660938533	1	0	0.07625	0.92375	0	0	0	0	3	2.72E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215839188	1	35845393	G	C	ZMYM4	CCDS389.1	r.?	-	-	intronic	30	0	0	50	6	12	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.352941176	0.352941176	1	0.1675	0.665	0.1675	0	0	0	0	2	2.06E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215839217	1	36020719	G	C	KIAA0319L	CCDS390.1	r.?	-	-	intronic	40	0	0	66	13	19.6969697	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.579322638	0.579322638	1	0.0075	0.21375	0.77875	0	0	0	0	3	1.95E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215839450	1	38123356	G	C	-	-	-	-	-	-	30	0	0	8	3	37.5	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	1.102941176	1.102941176	1	0	0.015	0.985	0	0	0	0	3	6.87E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215840097	1	43308093	G	C	ERMAP	CCDS475.1	r.?	-	-	intronic	25	0	0	73	18	24.65753425	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.21837228	1.21837228	1	0	0.00125	0.99875	0	0	0	0	3	1.62E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215840244	1	44548585	G	C	-	-	-	-	-	-	29	0	0	61	14	22.95081967	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.134040501	1.134040501	1	0	0.0025	0.9975	0	0	0	0	3	1.10E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215840593	1	47292397	G	C	-	-	-	-	-	-	44	0	0	74	13	17.56756757	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.868044515	0.868044515	1	0	0.01125	0.98875	0	0	0	0	3	9.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215840611	1	47447052	A	C	-	-	-	-	-	-	48	0	0	81	15	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.005	0.995	0	0	0	0	3	1.82E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215840789	1	49317372	G	C	AGBL4	CCDS44137.1	r.?	-	-	intronic	32	0	0	63	7	11.11111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.549019608	0.549019608	1	0.005	0.13125	0.86375	0	0	0	0	3	3.38E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215840854	1	49947457	T	C	AGBL4	CCDS44137.1	r.?	-	-	intronic	39	0	0	75	12	16	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0	0.0125	0.9875	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215841138	1	52404146	G	C	RAB3B	CCDS560.1	r.?	-	-	intronic	36	0	0	63	20	31.74603175	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.568627451	0.784313725	2	0	0.0075	0.9925	0	0	0	0	3	1.05E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215841159	1	52557076	G	C	BTF3L4	CCDS30713.1	r.?	-	-	downstream	32	0	0	74	23	31.08108108	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.535771065	0.767885533	2	0	0.0075	0.9925	0	0	0	0	3	7.70E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215841206	1	52887656	A	C	ZCCHC11	CCDS30716.1	r.?	-	-	downstream	29	0	0	79	7	8.860759494	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.437825763	0.437825763	1	0.04125	0.4175	0.54125	0	0	0	0	3	1.65E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215841288	1	53446158	G	C	SCP2	CCDS572.1	r.937g>c	c.916G>C	p.D306H	missense	36	0	0	74	20	27.02702703	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.3354531	1.3354531	1	0	0	1	0	0	0	0	3	4.34E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215841347	1	54032789	G	C	GLIS1	CCDS582.1	r.?	-	-	intronic	45	0	0	75	16	21.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.054117647	1.054117647	1	0	0	1	0	0	0	0	3	9.88E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215841800	1	58224087	G	C	DAB1	CCDS607.1	r.?	-	-	intronic	44	0	0	79	12	15.18987342	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.750558451	0.750558451	1	0	0.02375	0.97625	0	0	0	0	3	9.17E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215841945	1	59341044	G	C	-	-	-	-	-	-	30	0	0	78	14	17.94871795	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.066365008	1.066365008	1	0	0.005	0.995	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215842090	1	60482759	T	C	C1orf87	CCDS614.1	r.?	-	-	intronic	46	0	0	69	13	18.84057971	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.930946292	0.930946292	1	0	0.00375	0.99625	0	0	0	0	3	3.64E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215842122	1	60771775	T	C	-	-	-	-	-	-	39	0	0	80	12	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.025	0.975	0	0	0	0	3	1.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215842630	1	64124409	G	C	PGM1	CCDS625.1	r.?	-	-	intronic	20	0	0	38	7	18.42105263	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.910216718	0.910216718	1	0	0.00875	0.99125	0	0	0	0	3	8.61E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215843222	1	68789181	G	C	-	-	-	-	-	-	35	0	0	40	12	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0.0025	0.9975	0	0	0	0	3	1.20E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215843368	1	70481164	T	C	LRRC7	CCDS645.1	r.?	-	-	intronic	34	0	0	65	17	26.15384615	130	0	0	119	20	16.80672269							3	2	1	1	NA	NA	NA	unphased	1.030769231	1.030769231	1	0	0	1	0	0	0	0	3	1.14E-24	1	1.46E-24	1	YES	somatic	1_1
1353824	PD9772b	1215843462	1	71222506	G	C	-	-	-	-	-	-	40	0	0	57	20	35.0877193	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.382868937	1.382868937	1	0	0	1	0	0	0	0	3	9.67E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215843550	1	72086196	G	C	NEGR1	CCDS661.1	r.?	-	-	intronic	44	0	0	55	13	23.63636364	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.931550802	0.931550802	1	0	0.00375	0.99625	0	0	0	0	3	1.46E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215843979	1	76516787	G	C	-	-	-	-	-	-	39	0	0	61	16	26.2295082	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.033751205	1.033751205	1	0	0	1	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215844421	1	81051339	T	C	-	-	-	-	-	-	26	0	0	72	18	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215844476	1	81770074	T	C	LPHN2	ENST00000370728	r.?	-	-	upstream	31	0	0	71	16	22.53521127	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.888152444	0.888152444	1	0	0	1	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215844560	1	82448480	G	C	LPHN2	CCDS689.1	r.?	-	-	intronic	27	0	0	68	19	27.94117647	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.101211073	1.101211073	1	0	0	1	0	0	0	0	3	5.06E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215844568	1	82528186	T	C	-	-	-	-	-	-	33	0	0	72	23	31.94444444	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.258986928	1.258986928	1	0	0.00125	0.99875	0	0	0	0	3	3.67E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215844957	1	85889925	G	C	DDAH1	CCDS705.1	r.?	-	-	intronic	47	0	0	51	16	31.37254902	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.23644752	1.23644752	1	0	0	1	0	0	0	0	3	9.28E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215845170	1	87978857	T	C	-	-	-	-	-	-	28	0	0	79	16	20.25316456	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.798212956	0.798212956	1	0	0.00625	0.99375	0	0	0	0	3	2.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215845194	1	88249452	A	C	-	-	-	-	-	-	30	0	0	62	10	16.12903226	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.635673624	0.635673624	1	0.00125	0.06875	0.93	0	0	0	0	3	8.29E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215845563	1	92025206	T	C	-	-	-	-	-	-	33	0	0	46	9	19.56521739	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.771099744	0.771099744	1	0	0.01875	0.98125	0	0	0	0	3	1.82E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215845766	1	94274363	T	C	BCAR3	CCDS745.1	r.?	-	-	intronic	33	0	0	75	21	28	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.103529412	1.103529412	1	0	0	1	0	0	0	0	3	7.75E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215845819	1	94838222	A	C	-	-	-	-	-	-	36	0	0	59	13	22.03389831	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.868394816	0.868394816	1	0	0.00375	0.99625	0	0	0	0	3	3.99E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215846045	1	97134346	G	C	-	-	-	-	-	-	38	0	0	75	24	32	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.261176471	1.261176471	1	0	0	1	0	0	0	0	3	1.20E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215846277	1	99752943	A	C	ENSG00000117600	CCDS757.1	r.?	-	-	intronic	40	0	0	57	13	22.80701754	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.898864809	0.898864809	1	0	0.00875	0.99125	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215846670	1	103578864	G	C	COL11A1	CCDS779.1	r.?	-	-	upstream	43	0	0	66	14	21.21212121	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.83600713	0.83600713	1	0	0.00625	0.99375	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215846687	1	103756450	G	C	-	-	-	-	-	-	30	0	0	61	15	24.59016393	2	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.969141755	0.969141755	1	0	0.00125	0.99875	0	0	0	0	3	1.73E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215846688	1	103767205	G	C	-	-	-	-	-	-	37	0	0	68	17	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215846827	1	105423044	G	C	-	-	-	-	-	-	47	0	0	67	16	23.88059701	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.0025	0.9975	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215846930	1	106172492	T	C	-	-	-	-	-	-	43	0	0	71	19	26.76056338	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.054681027	1.054681027	1	0	0	1	0	0	0	0	3	1.29E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215847479	1	112982600	G	C	CTTNBP2NL	CCDS845.1	r.?	-	-	intronic	37	0	0	72	14	19.44444444	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.766339869	0.766339869	1	0	0.015	0.985	0	0	0	0	3	1.39E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215847654	1	115222317	G	C	AMPD1	CCDS876.1	r.864c>g	c.780C>G	p.T260T	silent	33	0	0	52	19	36.53846154	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.440045249	0.720022624	2	0	0.03	0.97	0	0	0	0	3	1.24E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215847943	1	117402784	A	C	-	-	-	-	-	-	32	0	0	41	10	24.3902439	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.961262554	0.961262554	1	0	0.00375	0.99625	0	0	0	0	3	9.51E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215848105	1	119240200	G	C	-	-	-	-	-	-	26	0	0	61	15	24.59016393	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.969141755	0.969141755	1	0	0.00125	0.99875	0	0	0	0	3	1.73E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215856639	1	146005518	A	C	-	-	-	-	-	-	76	0	0	81	8	9.87654321	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.488017429	0.488017429	1	0.0175	0.31	0.6725	0	0	0	0	3	9.08E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215856777	1	146843275	G	C	-	-	-	-	-	-	45	0	0	85	16	18.82352941	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.930103806	0.930103806	1	0	0.00125	0.99875	0	0	0	0	3	8.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215858503	1	150008746	G	C	-	-	-	-	-	-	35	0	0	83	18	21.68674699	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.071580439	1.071580439	1	0	0	1	0	0	0	0	3	2.09E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215858511	1	150139086	T	C	-	-	-	-	-	-	40	0	0	44	8	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.01625	0.98375	0	0	0	0	3	5.90E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215858552	1	150388354	A	C	RPRD2	CCDS44216.1	r.?	-	-	intronic	35	0	0	57	11	19.29824561	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.953560372	0.953560372	1	0	0.00125	0.99875	0	0	0	0	3	7.29E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215858748	1	151667013	A	C	SNX27	CCDS1001.1	r.2643a>c	c.?	p.?	3'UTR variant	35	0	0	81	16	19.75308642	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976034858	0.976034858	1	0	0.00125	0.99875	0	0	0	0	3	3.77E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215858980	1	153390827	T	C	S100A7A	CCDS30872.1	r.?	-	-	intronic	45	0	0	89	11	12.35955056	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.610707204	0.610707204	1	0.00375	0.10125	0.895	0	0	0	0	3	1.25E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215859191	1	154876190	T	C	-	-	-	-	-	-	23	0	0	70	16	22.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.129411765	1.129411765	1	0	0.00125	0.99875	0	0	0	0	3	2.93E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215859278	1	155775696	G	C	GON4L	CCDS44242.1	r.?	-	-	intronic	34	0	0	32	6	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.01125	0.98875	0	0	0	0	3	1.27E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215859315	1	156071791	G	C	LMNA	CCDS1131.1	r.?	-	-	intronic	36	0	0	26	5	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0.01375	0.98625	0	0	0	0	3	1.88E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215859608	1	158559663	G	C	-	-	-	-	-	-	30	0	0	78	17	21.79487179	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.076923077	1.076923077	1	0	0	1	0	0	0	0	3	3.59E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215859684	1	159154277	T	C	CADM3	CCDS44251.1	r.?	-	-	intronic	36	0	0	86	20	23.25581395	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.149110807	1.149110807	1	0	0	1	0	0	0	0	3	1.27E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215859839	1	160436239	G	C	-	-	-	-	-	-	41	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0	1	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215860326	1	163664921	A	C	-	-	-	-	-	-	25	0	0	80	13	16.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.802941176	0.802941176	1	0	0.00875	0.99125	0	0	0	0	3	2.82E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215860746	1	166565529	T	C	-	-	-	-	-	-	36	0	0	85	20	23.52941176	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0	1	0	0	0	0	3	9.82E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215861443	1	172452662	G	C	-	-	-	-	-	-	46	0	0	70	13	18.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.917647059	0.917647059	1	0	0.005	0.995	0	0	0	0	3	4.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215861792	1	175313363	G	C	TNR	CCDS1318.1	r.?	-	-	intronic	28	0	0	81	22	27.16049383	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.34204793	1.34204793	1	0	0	1	0	0	0	0	3	6.68E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215862031	1	177312269	T	C	-	-	-	-	-	-	34	0	0	88	23	26.13636364	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.29144385	1.29144385	1	0	0	1	0	0	0	0	3	7.59E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215862447	1	180029681	T	C	CEP350	CCDS1336.1	r.?	-	-	intronic	39	0	0	82	18	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0.0025	0.9975	0	0	0	0	3	1.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215862541	1	180567633	G	C	-	-	-	-	-	-	35	0	0	69	12	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.005	0.995	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215862693	1	181846541	A	C	-	-	-	-	-	-	39	0	0	75	19	25.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.251764706	1.251764706	1	0	0	1	0	0	0	0	3	4.19E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215862847	1	182912320	T	C	C1orf14	CCDS30955.1	r.?	-	-	intronic	27	0	0	62	22	35.48387097	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.753320683	0.876660342	2	0	0	1	0	0	0	0	3	6.75E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215863509	1	188126079	G	C	-	-	-	-	-	-	26	0	0	79	5	6.329113924	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.312732688	0.312732688	1	0.18625	0.6325	0.18125	0	0	0	0	2	5.18E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215863686	1	189568285	T	C	-	-	-	-	-	-	39	0	0	65	15	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	5.00E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215863772	1	190138194	G	C	FAM5C	CCDS1373.1	r.?	-	-	intronic	35	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0	1	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215864437	1	195022098	A	C	-	-	-	-	-	-	47	0	0	66	6	9.090909091	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.449197861	0.449197861	1	0.02875	0.31625	0.655	0	0	0	0	3	1.10E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215864438	1	195026095	A	C	-	-	-	-	-	-	32	0	0	69	18	26.08695652	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.289002558	1.289002558	1	0	0	1	0	0	0	0	3	5.16E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215864472	1	195142025	G	C	-	-	-	-	-	-	43	0	0	62	6	9.677419355	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.478178368	0.478178368	1	0.02375	0.215	0.76125	0	0	0	0	3	7.56E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215864515	1	195565598	A	C	-	-	-	-	-	-	29	0	0	70	18	25.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.270588235	1.270588235	1	0	0	1	0	0	0	0	3	6.91E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215864835	1	197859755	A	C	-	-	-	-	-	-	38	0	0	21	3	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.0025	0.04875	0.94875	0	0	0	0	3	0.000155401	1	1	1	NA	NA	NA
1353824	PD9772b	1215865263	1	200895985	T	C	-	-	-	-	-	-	43	0	0	32	8	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.0025	0.9975	0	0	0	0	3	3.69E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215865284	1	201137051	T	C	TMEM9	ENST00000367333	r.?	-	-	intronic	45	0	0	71	13	18.30985915	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.904722452	0.904722452	1	0	0.00125	0.99875	0	0	0	0	3	5.42E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215865375	1	201754204	A	C	NAV1	CCDS1414.1	r.?	-	-	intronic	31	0	0	32	3	9.375	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.463235294	0.463235294	1	0.01375	0.115	0.87125	0	0	0	0	3	0.000556213	1	1	1	NA	NA	NA
1353824	PD9772b	1215865454	1	202366431	T	C	PPP1R12B	CCDS30973.1	r.?	-	-	intronic	35	0	0	82	17	20.73170732	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.024390244	1.024390244	1	0	0	1	0	0	0	0	3	9.09E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215865533	1	202952555	T	C	-	-	-	-	-	-	31	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0	1	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215865633	1	203709873	G	C	ATP2B4	CCDS1440.1	r.5632g>c	c.?	p.?	3'UTR variant	33	0	0	77	19	24.67532468	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.219251337	1.219251337	1	0	0	1	0	0	0	0	3	7.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215865699	1	204097844	G	C	SOX13	CCDS44299.1	r.?	-	-	downstream	41	0	0	50	7	14	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.691764706	0.691764706	1	0.00125	0.05	0.94875	0	0	0	0	3	6.46E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215866102	1	207558442	T	C	-	-	-	-	-	-	35	0	0	99	17	17.17171717	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.848484848	0.848484848	1	0	0.0025	0.9975	0	0	0	0	3	2.86E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215866230	1	208604664	G	C	-	-	-	-	-	-	39	0	0	82	19	23.17073171	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.144906743	1.144906743	1	0	0	1	0	0	0	0	3	2.79E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215866342	1	209460210	G	C	-	-	-	-	-	-	37	0	0	86	13	15.11627907	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.746922025	0.746922025	1	0	0.01	0.99	0	0	0	0	3	7.57E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215866420	1	210191748	G	C	SYT14	CCDS31014.1	r.?	-	-	intronic	28	0	0	33	8	24.24242424	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.197860963	1.197860963	1	0	0	1	0	0	0	0	3	4.85E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215867055	1	213831293	T	C	-	-	-	-	-	-	43	0	0	83	18	21.68674699	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.288447909	1.288447909	1	0	0	1	0	0	0	0	3	2.09E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215867131	1	214202635	G	C	PROX1	CCDS31021.1	r.?	-	-	intronic	36	0	0	87	11	12.64367816	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.751183232	0.751183232	1	0.00125	0.01625	0.9825	0	0	0	0	3	9.65E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215867399	1	216014894	G	C	USH2A	CCDS31025.1	r.?	-	-	intronic	40	0	0	116	24	20.68965517	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.229208925	1.229208925	1	0	0.00125	0.99875	0	0	0	0	3	1.68E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215867427	1	216248716	G	C	USH2A	CCDS31025.1	r.?	-	-	intronic	39	0	0	99	13	13.13131313	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.780154486	0.780154486	1	0	0.01625	0.98375	0	0	0	0	3	5.06E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215867613	1	217260427	G	C	ESRRG	CCDS1517.1	r.?	-	-	intronic	30	0	0	100	31	31	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.841764706	0.920882353	2	0	0	1	0	0	0	0	3	2.21E-46	1	1	1	NA	NA	NA
1353824	PD9772b	1215867638	1	217378835	T	C	-	-	-	-	-	-	30	0	0	93	13	13.97849462	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.830487034	0.830487034	1	0	0.005	0.995	0	0	0	0	3	2.18E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215867948	1	219380795	G	C	LYPLAL1	CCDS1522.1	r.?	-	-	intronic	37	0	0	88	26	29.54545455	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.755347594	0.877673797	2	0	0.00125	0.99875	0	0	0	0	3	1.61E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215868004	1	219637010	G	C	-	-	-	-	-	-	35	0	0	130	49	37.69230769	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.239366516	1.119683258	2	0	0	1	0	0	0	0	3	2.19E-77	1	1	1	NA	NA	NA
1353824	PD9772b	1215868005	1	219691107	A	C	-	-	-	-	-	-	36	0	0	102	20	19.60784314	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.164936563	1.164936563	1	0	0	1	0	0	0	0	3	5.36E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215868057	1	220023684	G	C	-	-	-	-	-	-	35	0	0	92	20	21.73913043	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.291560102	1.291560102	1	0	0.00125	0.99875	0	0	0	0	3	5.65E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215868326	1	221581297	T	C	-	-	-	-	-	-	31	0	0	94	17	18.08510638	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.074468085	1.074468085	1	0	0	1	0	0	0	0	3	1.12E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215868469	1	222433459	G	C	-	-	-	-	-	-	47	0	0	95	20	21.05263158	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.250773994	1.250773994	1	0	0	1	0	0	0	0	3	1.14E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215868531	1	222936915	T	C	-	-	-	-	-	-	36	0	0	92	14	15.2173913	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.904092072	0.904092072	1	0	0.0025	0.9975	0	0	0	0	3	5.34E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215868649	1	223591496	G	C	-	-	-	-	-	-	29	0	0	83	33	39.75903614	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.3621545	1.18107725	2	0	0	1	0	0	0	0	3	1.36E-53	1	1	1	NA	NA	NA
1353824	PD9772b	1215869151	1	226387621	T	C	-	-	-	-	-	-	32	0	0	84	17	20.23809524	1	0	0	1	1	100							5	3	2	1	NA	NA	NA	unphased	1.202380952	1.202380952	1	0	0	1	0	0	0	0	3	1.42E-22	1	0.005	1	NA	NA	NA
1353824	PD9772b	1215869460	1	228301207	T	C	MRPL55	CCDS1567.1	r.?	-	-	upstream	42	0	0	108	30	27.77777778	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.928104575	0.964052288	2	0	0.00125	0.99875	0	0	0	0	3	2.81E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1215870203	1	232373923	T	C	-	-	-	-	-	-	34	0	0	113	8	7.079646018	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.491410724	0.491410724	1	0.02	0.26	0.72	0	0	0	0	3	1.25E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215870327	1	233246934	G	C	PCNXL2	CCDS44335.1	r.?	-	-	intronic	31	0	0	97	34	35.05154639	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.432989691	0.810996564	3	0	0.0025	0.9975	0	0	0	0	3	7.04E-53	1	1	1	NA	NA	NA
1353824	PD9772b	1215870668	1	235121482	G	C	-	-	-	-	-	-	28	0	0	41	19	46.34146341	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	2.753228121	0.917742707	3	0	0.0025	0.9975	0	0	0	0	3	4.20E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215871028	1	236879837	A	C	ACTN2	CCDS1613.1	r.?	-	-	intronic	40	0	0	76	12	15.78947368	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	0.938080495	0.938080495	1	0	0	1	0	0	0	0	3	5.63E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215871595	1	239336626	G	C	-	-	-	-	-	-	33	0	0	124	24	19.35483871	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.34345351	1.34345351	1	0	0	1	0	0	0	0	3	9.58E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215872079	1	240837187	T	C	-	-	-	-	-	-	42	0	0	76	6	7.894736842	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	0.784829721	0.784829721	1	0.00125	0.025	0.97375	0	0	0	0	3	2.53E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215872316	1	241613629	G	C	-	-	-	-	-	-	38	0	0	143	25	17.48251748	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	1.737967914	0.868983957	2	0	0.00125	0.99875	0	0	0	0	3	8.95E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215872451	1	241941729	G	C	WDR64	ENST00000366552	r.?	-	-	intronic	45	0	0	166	16	9.638554217	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	0.958185684	0.958185684	1	0	0	1	0	0	0	0	3	5.67E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215873177	1	244443690	T	C	-	-	-	-	-	-	36	0	0	102	8	7.843137255	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.544405998	0.544405998	1	0.0075	0.1375	0.855	0	0	0	0	3	5.64E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215873188	1	244507208	T	C	-	-	-	-	-	-	44	0	0	68	10	14.70588235	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.020761246	1.020761246	1	0	0.00125	0.99875	0	0	0	0	3	2.18E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215873296	1	244892987	G	C	-	-	-	-	-	-	35	0	0	51	10	19.60784314	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.361014994	1.361014994	1	0	0.00125	0.99875	0	0	0	0	3	1.04E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215873482	1	245789062	T	C	KIF26B	CCDS44342.1	r.?	-	-	intronic	26	0	0	84	12	14.28571429	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.991596639	0.991596639	1	0	0.00375	0.99625	0	0	0	0	3	1.98E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215873890	1	247140989	T	C	ZNF695	ENST00000366504	r.?	-	-	intronic	38	0	0	60	11	18.33333333	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.27254902	1.27254902	1	0	0.00125	0.99875	0	0	0	0	3	1.34E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215874305	1	248809020	T	C	OR2T7	CCDS31124.1	r.?	-	-	downstream	11	0	0	22	9	40.90909091	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.839572193	0.946524064	3	0	0.005	0.995	0	0	0	0	3	9.16E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215874372	1	248890103	A	C	-	-	-	-	-	-	44	0	0	130	16	12.30769231	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.854298643	0.854298643	1	0	0.0025	0.9975	0	0	0	0	3	1.08E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215874427	10	73134	A	C	-	-	-	-	-	-	19	0	0	20	3	15	6	0	0	18	6	33.33333333							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	0.0001337	1	2.75E-10	1	NA	NA	NA
1353824	PD9772b	1215874553	10	694570	G	C	DIP2C	CCDS7054.1	r.?	-	-	intronic	44	0	0	45	4	8.888888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.439215686	0.439215686	1	0.01625	0.17625	0.8075	0	0	0	0	3	7.91E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215874560	10	799719	A	C	-	-	-	-	-	-	42	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.00375	0.99625	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215874573	10	943362	G	C	LARP4B	ENST00000406525	r.?	-	-	intronic	37	0	0	69	19	27.53623188	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.360613811	1.360613811	1	0	0	1	0	0	0	0	3	6.95E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215874767	10	2247215	T	C	-	-	-	-	-	-	41	0	0	80	16	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0	1	0	0	0	0	3	3.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215874856	10	2750442	G	C	-	-	-	-	-	-	57	0	0	93	22	23.65591398	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.168880455	1.168880455	1	0	0	1	0	0	0	0	3	2.05E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215875243	10	5447410	G	C	TUBAL3	CCDS7066.2	r.?	-	-	upstream	42	0	0	84	11	13.0952381	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.647058824	0.647058824	1	0.0025	0.0525	0.945	0	0	0	0	3	6.49E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215875390	10	6469873	T	C	PRKCQ	CCDS7079.1	r.2517a>g	c.?	p.?	3'UTR variant	30	0	0	87	15	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0	0.0075	0.9925	0	0	0	0	3	5.73E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215875535	10	7167623	A	C	-	-	-	-	-	-	29	0	0	80	15	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.00125	0.99875	0	0	0	0	3	1.49E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215875820	10	9048830	T	C	-	-	-	-	-	-	27	0	0	71	12	16.90140845	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.835128418	0.835128418	1	0	0.005	0.995	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215875826	10	9104871	A	C	-	-	-	-	-	-	33	0	0	82	22	26.82926829	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.325681492	1.325681492	1	0	0	1	0	0	0	0	3	9.09E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215875895	10	9500899	A	C	-	-	-	-	-	-	40	0	0	69	16	23.1884058	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.145780051	1.145780051	1	0	0.00125	0.99875	0	0	0	0	3	2.27E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215876063	10	10705827	G	C	-	-	-	-	-	-	38	0	0	91	10	10.98901099	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.542986425	0.542986425	1	0.0025	0.22875	0.76875	0	0	0	0	3	4.34E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215876317	10	12446859	T	C	CAMK1D	CCDS7091.1	r.?	-	-	intronic	16	0	0	35	7	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00875	0.99125	0	0	0	0	3	4.65E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215876693	10	14897380	T	C	HSPA14	CCDS7103.1	r.?	-	-	intronic	42	0	0	80	12	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.02625	0.97375	0	0	0	0	3	1.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215876840	10	15811329	G	C	-	-	-	-	-	-	35	0	0	59	14	23.72881356	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.172482552	1.172482552	1	0	0	1	0	0	0	0	3	6.58E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215876857	10	15954830	A	C	-	-	-	-	-	-	22	0	0	97	15	15.46391753	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.764099454	0.764099454	1	0	0.01375	0.98625	0	0	0	0	3	3.21E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215876866	10	16034895	T	C	-	-	-	-	-	-	40	0	0	93	20	21.50537634	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.062618596	1.062618596	1	0	0	1	0	0	0	0	3	7.16E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215876954	10	16599452	T	C	-	-	-	-	-	-	43	0	0	81	9	11.11111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.549019608	0.549019608	1	0.00625	0.1825	0.81125	0	0	0	0	3	3.68E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215877049	10	17193344	G	C	TRDMT1	CCDS7115.1	r.?	-	-	intronic	31	0	0	77	16	20.77922078	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.026737968	1.026737968	1	0	0.0025	0.9975	0	0	0	0	3	1.56E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215877074	10	17315097	T	C	-	-	-	-	-	-	30	0	0	35	6	17.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.847058824	0.847058824	1	0	0.00875	0.99125	0	0	0	0	3	2.24E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215877540	10	20517393	A	C	PLXDC2	CCDS7132.1	r.?	-	-	intronic	36	0	0	64	14	21.875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.080882353	1.080882353	1	0	0	1	0	0	0	0	3	2.31E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215877916	10	23649036	T	C	ENSG00000224148	ENST00000451785	r.?	-	-	intronic	32	0	0	56	17	30.35714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.5	0.75	2	0	0.0175	0.9825	0	0	0	0	3	6.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215878625	10	28139073	T	C	ARMC4	CCDS7157.1	r.?	-	-	intronic	30	0	0	46	10	21.73913043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.074168798	1.074168798	1	0	0.0025	0.9975	0	0	0	0	3	3.38E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215878783	10	29288374	G	C	-	-	-	-	-	-	33	0	0	55	9	16.36363636	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.80855615	0.80855615	1	0.00125	0.00375	0.995	0	0	0	0	3	1.01E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215879153	10	31513578	G	C	-	-	-	-	-	-	47	0	0	60	13	21.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.070588235	1.070588235	1	0	0.00125	0.99875	0	0	0	0	3	5.07E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215879345	10	33027465	T	C	C10orf68	CCDS31177.1	r.?	-	-	intronic	35	0	0	53	12	22.64150943	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.118756937	1.118756937	1	0	0	1	0	0	0	0	3	5.39E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215879395	10	33445452	T	C	-	-	-	-	-	-	38	0	0	88	20	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0.00125	0.99875	0	0	0	0	3	2.12E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215879401	10	33460577	T	C	-	-	-	-	-	-	35	0	0	37	7	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.0125	0.9875	0	0	0	0	3	7.05E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215885265	10	55034864	T	C	-	-	-	-	-	-	52	0	0	71	17	23.94366197	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.943661972	0.943661972	1	0	0.005	0.995	0	0	0	0	3	6.12E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215886029	10	61727215	T	C	-	-	-	-	-	-	30	0	0	48	13	27.08333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.338235294	1.338235294	1	0	0.00125	0.99875	0	0	0	0	3	2.00E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215886047	10	61852855	G	C	ANK3	CCDS7258.1	r.?	-	-	intronic	42	0	0	53	13	24.52830189	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.211986681	1.211986681	1	0	0	1	0	0	0	0	3	8.53E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215886204	10	63244625	G	C	-	-	-	-	-	-	47	0	0	73	16	21.91780822	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.082997583	1.082997583	1	0	0.00125	0.99875	0	0	0	0	3	6.15E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215886297	10	63969667	T	C	RTKN2	CCDS7263.1	r.?	-	-	intronic	38	0	0	83	15	18.07228916	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.8929837	0.8929837	1	0	0.0025	0.9975	0	0	0	0	3	2.70E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215886350	10	64424097	G	C	ZNF365	CCDS7264.1	r.?	-	-	intronic	33	0	0	69	10	14.49275362	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.716112532	0.716112532	1	0	0.03375	0.96625	0	0	0	0	3	2.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215886469	10	65317020	G	C	REEP3	CCDS44411.1	r.?	-	-	intronic	33	0	0	57	17	29.8245614	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.473684211	1.473684211	1	0	0	1	0	0	0	0	3	8.82E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215886689	10	67005699	T	C	-	-	-	-	-	-	39	0	0	77	20	25.97402597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.28342246	1.28342246	1	0	0	1	0	0	0	0	3	1.07E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215886712	10	67152723	G	C	-	-	-	-	-	-	28	0	0	63	14	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	1.81E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215886989	10	69366002	T	C	CTNNA3	CCDS7269.1	r.?	-	-	intronic	47	0	0	65	14	21.53846154	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.064253394	1.064253394	1	0	0	1	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215887162	10	70491201	G	C	CCAR1	CCDS7282.1	r.?	-	-	intronic	35	0	0	90	6	6.666666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.329411765	0.329411765	1	0.17625	0.67625	0.1475	0	0	0	0	2	6.79E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215887180	10	70598038	G	C	STOX1	CCDS41535.1	r.?	-	-	intronic	41	0	0	55	12	21.81818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.078074866	1.078074866	1	0	0	1	0	0	0	0	3	8.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215887317	10	72003259	G	C	-	-	-	-	-	-	41	0	0	67	15	22.3880597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.106233538	1.106233538	1	0	0	1	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215887701	10	74944739	G	C	FAM149B1	CCDS44435.1	r.?	-	-	intronic	38	0	0	78	20	25.64102564	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.266968326	1.266968326	1	0	0	1	0	0	0	0	3	1.43E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215887805	10	75813013	T	C	VCL	CCDS7341.1	r.?	-	-	intronic	28	0	0	62	14	22.58064516	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.115749526	1.115749526	1	0	0	1	0	0	0	0	3	1.42E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215888219	10	78990218	G	C	KCNMA1	CCDS7352.1	r.?	-	-	intronic	44	0	0	77	15	19.48051948	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.962566845	0.962566845	1	0	0.00125	0.99875	0	0	0	0	3	8.05E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215888271	10	79349901	G	C	KCNMA1	CCDS7352.1	r.?	-	-	intronic	34	0	0	22	10	45.45454545	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.245989305	1.122994652	2	0	0	1	0	0	0	0	3	5.98E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215888277	10	79416895	G	C	-	-	-	-	-	-	39	0	0	74	17	22.97297297	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.135135135	1.135135135	1	0	0	1	0	0	0	0	3	1.34E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215888630	10	82512578	T	C	-	-	-	-	-	-	38	0	0	79	15	18.98734177	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.938198064	0.938198064	1	0.00125	0.0025	0.99625	0	0	0	0	3	1.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215888665	10	82781122	T	C	-	-	-	-	-	-	41	0	0	47	13	27.65957447	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.366708385	1.366708385	1	0	0.00125	0.99875	0	0	0	0	3	1.47E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215889254	10	87327263	G	C	-	-	-	-	-	-	37	0	0	77	15	19.48051948	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.962566845	0.962566845	1	0	0.00375	0.99625	0	0	0	0	3	8.05E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215889308	10	88041563	G	C	GRID1	CCDS31236.1	r.?	-	-	intronic	36	0	0	49	9	18.36734694	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.907563025	0.907563025	1	0	0.0075	0.9925	0	0	0	0	3	3.35E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215889363	10	88490170	A	C	LDB3	CCDS41544.1	r.?	-	-	intronic	31	0	0	60	11	18.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.905882353	0.905882353	1	0	0.005	0.995	0	0	0	0	3	1.34E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215889606	10	90408011	T	C	-	-	-	-	-	-	39	0	0	74	15	20.27027027	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.001589825	1.001589825	1	0	0.00125	0.99875	0	0	0	0	3	4.22E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215889640	10	90826812	T	C	-	-	-	-	-	-	40	0	0	91	14	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0.00125	0.02375	0.975	0	0	0	0	3	4.55E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215889680	10	91063472	T	C	IFIT2	CCDS41548.1	r.?	-	-	intronic	35	0	0	64	11	17.1875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.849264706	0.849264706	1	0	0.01	0.99	0	0	0	0	3	2.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215889860	10	92787255	T	C	-	-	-	-	-	-	32	0	0	74	12	16.21621622	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.80127186	0.80127186	1	0.00125	0.01375	0.985	0	0	0	0	3	4.02E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215889988	10	93883053	A	C	CPEB3	CCDS31246.1	r.?	-	-	intronic	19	0	0	68	8	11.76470588	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.581314879	0.581314879	1	0.00125	0.105	0.89375	0	0	0	0	3	2.21E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215890004	10	94010125	G	C	CPEB3	CCDS31246.1	r.?	-	-	intronic	35	0	0	29	5	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0	0.02375	0.97625	0	0	0	0	3	3.36E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215890604	10	98110679	T	C	OPALIN	CCDS44466.1	r.?	-	-	intronic	35	0	0	90	21	23.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.152941176	1.152941176	1	0	0	1	0	0	0	0	3	5.83E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215890967	10	101097890	G	C	CNNM1	CCDS7478.2	r.?	-	-	intronic	27	0	0	43	8	18.60465116	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.919288646	0.919288646	1	0	0.01	0.99	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215891134	10	102196697	G	C	-	-	-	-	-	-	38	0	0	55	12	21.81818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.078074866	1.078074866	1	0	0.00125	0.99875	0	0	0	0	3	8.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215891814	10	107784407	G	C	-	-	-	-	-	-	36	0	0	95	22	23.15789474	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.144272446	1.144272446	1	0	0.00125	0.99875	0	0	0	0	3	3.45E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215891903	10	108332883	G	C	SORCS1	CCDS7559.1	r.?	-	-	downstream	44	0	0	69	10	14.49275362	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.716112532	0.716112532	1	0.00125	0.035	0.96375	0	0	0	0	3	2.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215892111	10	109984383	T	C	-	-	-	-	-	-	37	0	0	90	17	18.88888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.933333333	0.933333333	1	0	0.0025	0.9975	0	0	0	0	3	5.05E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215892616	10	114322875	T	C	VTI1A	CCDS7575.2	r.?	-	-	intronic	34	0	0	79	13	16.4556962	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.813104989	0.813104989	1	0	0.01	0.99	0	0	0	0	3	2.37E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215892620	10	114352695	G	C	VTI1A	CCDS7575.2	r.?	-	-	intronic	43	0	0	90	24	26.66666667	250	0	0	278	38	13.66906475							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0	0	1	0	0	0	0	3	1.91E-34	1	1.14E-41	1	YES	somatic	1_1
1353824	PD9772b	1215892857	10	116159628	A	C	AFAP1L2	CCDS31287.1	r.?	-	-	intronic	33	0	0	88	17	19.31818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.954545455	0.954545455	1	0	0.00125	0.99875	0	0	0	0	3	3.34E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215892904	10	116551167	G	C	-	-	-	-	-	-	26	0	0	25	4	16	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0.0025	0.0175	0.98	0	0	0	0	3	7.27E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215892973	10	117055135	G	C	ATRNL1	CCDS7592.1	r.?	-	-	intronic	46	0	0	22	3	13.63636364	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.673796791	0.673796791	1	0.005	0.03375	0.96125	0	0	0	0	3	0.000179267	1	1	1	NA	NA	NA
1353824	PD9772b	1215893011	10	117368628	T	C	ATRNL1	CCDS7592.1	r.?	-	-	intronic	35	0	0	84	27	32.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.588235294	0.794117647	2	0	0.005	0.995	0	0	0	0	3	4.25E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1215893411	10	120740922	G	C	-	-	-	-	-	-	32	0	0	19	3	15.78947368	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.780185759	0.780185759	1	0.00125	0.02125	0.9775	0	0	0	0	3	0.000114071	1	1	1	NA	NA	NA
1353824	PD9772b	1215893935	10	124438526	G	C	ENSG00000214308	ENST00000398072	r.319g>c	c.319G>C	p.E107Q	missense	31	0	0	74	19	25.67567568	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.268680445	1.268680445	1	0	0.00125	0.99875	0	0	0	0	3	3.14E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215893942	10	124528184	G	C	-	-	-	-	-	-	34	0	0	51	10	19.60784314	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.968858131	0.968858131	1	0	0.0025	0.9975	0	0	0	0	3	1.04E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215894031	10	125086504	A	C	-	-	-	-	-	-	39	0	0	78	15	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0.00125	0.99875	0	0	0	0	3	9.92E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215894037	10	125125382	G	C	-	-	-	-	-	-	30	0	0	73	20	27.39726027	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.353746978	1.353746978	1	0	0	1	0	0	0	0	3	3.18E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215894829	10	130003502	G	C	-	-	-	-	-	-	38	0	0	73	6	8.219178082	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.406124093	0.406124093	1	0.05	0.41625	0.53375	0	0	0	0	3	2.00E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215895041	10	132105595	A	C	-	-	-	-	-	-	38	0	0	63	11	17.46031746	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.862745098	0.862745098	1	0.00125	0.0075	0.99125	0	0	0	0	3	2.37E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215895174	10	133152857	G	C	-	-	-	-	-	-	30	0	0	72	22	30.55555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.509803922	0.754901961	2	0	0.01625	0.98375	0	0	0	0	3	3.36E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215895785	11	1711916	T	C	-	-	-	-	-	-	31	0	0	8	3	37.5	0	0	NA	0	0	NA							0.446583235	0	0	0.553416765	1	0	0.446583235	unphased	0.52040989	0.52040989	1	0.01875	0.13125	0.85	0	0	0	0	3	6.87E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215895981	11	3643646	G	C	-	-	-	-	-	-	35	0	0	40	11	27.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.083823529	1.083823529	1	0	0.00125	0.99875	0	0	0	0	3	9.88E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215895982	11	3655619	G	C	ART5	CCDS7743.1	r.?	-	-	downstream	42	0	0	34	6	17.64705882	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.69550173	0.69550173	1	0.005	0.0375	0.9575	0	0	0	0	3	1.86E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215896094	11	4400438	T	C	-	-	-	-	-	-	29	0	0	60	13	21.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.853921569	0.853921569	1	0	0.00375	0.99625	0	0	0	0	3	5.07E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215896846	11	11576274	T	C	GALNTL4	CCDS7807.1	r.?	-	-	intronic	40	0	0	37	8	21.62162162	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.852146264	0.852146264	1	0	0.02125	0.97875	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215897381	11	16758182	T	C	C11orf58	CCDS7822.1	r.?	-	-	upstream	34	0	0	58	13	22.4137931	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.88336714	0.88336714	1	0	0.0025	0.9975	0	0	0	0	3	3.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215897806	11	21148141	A	C	NELL1	CCDS7855.1	r.?	-	-	intronic	34	0	0	64	14	21.875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.080882353	1.080882353	1	0	0	1	0	0	0	0	3	2.31E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215897946	11	22157469	A	C	-	-	-	-	-	-	48	0	0	103	21	20.38834951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.007424329	1.007424329	1	0	0	1	0	0	0	0	3	1.31E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215898045	11	22762152	T	C	GAS2	CCDS7858.1	r.?	-	-	intronic	38	0	0	83	21	25.30120482	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.250177179	1.250177179	1	0	0	1	0	0	0	0	3	8.70E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215898377	11	24735061	A	C	LUZP2	CCDS31446.1	r.?	-	-	intronic	37	0	0	78	14	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.005	0.995	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215898471	11	25149281	G	C	-	-	-	-	-	-	32	0	0	89	16	17.97752809	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.888301388	0.888301388	1	0	0.00625	0.99375	0	0	0	0	3	1.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215898585	11	25811772	T	C	-	-	-	-	-	-	30	0	0	80	19	23.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.173529412	1.173529412	1	0	0	1	0	0	0	0	3	1.65E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215898597	11	25863025	G	C	-	-	-	-	-	-	45	0	0	78	11	14.1025641	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.696832579	0.696832579	1	0.00125	0.04625	0.9525	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215898816	11	27021162	T	C	FIBIN	CCDS7861.1	r.?	-	-	downstream	39	0	0	69	16	23.1884058	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.145780051	1.145780051	1	0	0	1	0	0	0	0	3	2.27E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215899862	11	35918384	G	C	-	-	-	-	-	-	30	0	0	86	20	23.25581395	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.149110807	1.149110807	1	0	0.00125	0.99875	0	0	0	0	3	1.27E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215899924	11	36376318	T	C	-	-	-	-	-	-	39	0	0	104	12	11.53846154	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.685520362	0.685520362	1	0	0.03125	0.96875	0	0	0	0	3	2.76E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215899926	11	36383389	T	C	-	-	-	-	-	-	42	0	0	78	25	32.05128205	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.904223228	0.952111614	2	0	0	1	0	0	0	0	3	3.94E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215900075	11	37283794	A	C	-	-	-	-	-	-	35	0	0	98	18	18.36734694	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.091236495	1.091236495	1	0	0	1	0	0	0	0	3	5.37E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215900186	11	37881782	G	C	-	-	-	-	-	-	37	0	0	102	38	37.25490196	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.213379469	1.106689735	2	0	0	1	0	0	0	0	3	3.86E-60	1	1	1	NA	NA	NA
1353824	PD9772b	1215900351	11	38704506	G	C	-	-	-	-	-	-	37	0	0	52	13	25	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.485294118	1.485294118	1	0	0	1	0	0	0	0	3	6.47E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215900617	11	39973050	T	C	-	-	-	-	-	-	35	0	0	80	11	13.75	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.816911765	0.816911765	1	0.00125	0.0075	0.99125	0	0	0	0	3	3.73E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215900798	11	41003949	A	C	-	-	-	-	-	-	35	0	0	101	27	26.73267327	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.588235294	0.794117647	2	0	0.00125	0.99875	0	0	0	0	3	1.36E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215900951	11	42034414	A	C	-	-	-	-	-	-	43	0	0	97	35	36.08247423	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.143723469	1.071861734	2	0	0	1	0	0	0	0	3	6.36E-55	1	1	1	NA	NA	NA
1353824	PD9772b	1215901044	11	42550311	T	C	-	-	-	-	-	-	46	0	0	93	16	17.20430108	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.022137887	1.022137887	1	0	0	1	0	0	0	0	3	4.04E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215901263	11	44179602	A	C	EXT2	CCDS7908.1	r.?	-	-	intronic	45	0	0	66	14	21.21212121	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.048128342	1.048128342	1	0	0	1	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215901414	11	45582604	T	C	-	-	-	-	-	-	31	0	0	10	3	30	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.482352941	1.482352941	1	0.00125	0.01125	0.9875	0	0	0	0	3	1.46E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215901894	11	48557776	T	C	-	-	-	-	-	-	43	0	0	100	19	19	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.938823529	0.938823529	1	0	0.00125	0.99875	0	0	0	0	3	1.72E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215902443	11	49478868	G	C	-	-	-	-	-	-	30	0	0	74	17	22.97297297	220	0	0	209	20	9.56937799							4	2	2	1	NA	NA	NA	unphased	1.135135135	1.135135135	1	0	0	1	0	0	0	0	3	1.34E-23	1	1.57E-19	1	YES	somatic	1_1
1353824	PD9772b	1215903823	11	57360759	T	C	SERPING1	CCDS7962.1	r.?	-	-	upstream	30	0	0	74	20	27.02702703	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.3354531	1.3354531	1	0	0	1	0	0	0	0	3	4.34E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215904016	11	58707657	G	C	GLYATL1	CCDS31556.1	r.?	-	-	upstream	35	0	0	77	11	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.0375	0.96125	0	0	0	0	3	2.41E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215904160	11	59839157	G	C	MS4A3	CCDS31567.1	r.?	-	-	downstream	28	0	0	59	11	18.6440678	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.921236291	0.921236291	1	0	0.00875	0.99125	0	0	0	0	3	1.10E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215904161	11	59839158	G	C	MS4A3	CCDS31567.1	r.?	-	-	downstream	29	0	0	59	11	18.6440678	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.921236291	0.921236291	1	0	0.00625	0.99375	0	0	0	0	3	1.10E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215904284	11	60887478	G	C	CD5	CCDS8000.1	r.?	-	-	intronic	31	0	0	20	8	40	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.976470588	0.988235294	2	0	0.005	0.995	0	0	0	0	3	4.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215904606	11	63604011	A	C	MARK2	ENST00000508192	r.?	-	-	upstream	28	0	0	53	9	16.98113208	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.839067703	0.839067703	1	0	0.005	0.995	0	0	0	0	3	7.10E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215904793	11	65882341	T	C	PACS1	CCDS8129.1	r.?	-	-	intronic	33	0	0	48	14	29.16666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.441176471	1.441176471	1	0	0.0025	0.9975	0	0	0	0	3	2.51E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215904805	11	66023263	G	C	KLC2	CCDS8130.1	r.?	-	-	upstream	37	0	0	31	6	19.35483871	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.956356736	0.956356736	1	0	0.00125	0.99875	0	0	0	0	3	1.03E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215905151	11	68907420	G	C	-	-	-	-	-	-	31	0	0	20	5	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.00625	0.99375	0	0	0	0	3	4.55E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215905283	11	70166210	T	C	PPFIA1	CCDS31627.1	r.?	-	-	intronic	32	0	0	53	10	18.86792453	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.932297447	0.932297447	1	0	0.00375	0.99625	0	0	0	0	3	1.57E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215905834	11	74432936	G	C	CHRDL2	CCDS8234.1	r.?	-	-	intronic	40	0	0	46	9	19.56521739	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.966751918	0.966751918	1	0	0.005	0.995	0	0	0	0	3	1.82E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215905930	11	75203462	G	C	GDPD5	CCDS8238.1	r.?	-	-	intronic	36	0	0	38	11	28.94736842	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.430340557	1.430340557	1	0	0	1	0	0	0	0	3	5.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215906252	11	77819852	G	C	ALG8	CCDS41692.1	r.?	-	-	intronic	34	0	0	64	18	28.125	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.389705882	1.389705882	1	0	0	1	0	0	0	0	3	1.10E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215906311	11	78212825	A	C	NARS2	CCDS8261.1	r.?	-	-	intronic	23	0	0	91	17	18.68131868	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.923076923	0.923076923	1	0	0	1	0	0	0	0	3	6.18E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215906588	11	80519512	T	C	-	-	-	-	-	-	26	0	0	57	7	12.28070175	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.606811146	0.606811146	1	0.005	0.075	0.92	0	0	0	0	3	1.66E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215906648	11	81076213	T	C	-	-	-	-	-	-	41	0	0	63	9	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.04375	0.955	0	0	0	0	3	3.62E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215906849	11	82352883	G	C	-	-	-	-	-	-	29	0	0	93	19	20.43010753	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.009487666	1.009487666	1	0	0.005	0.995	0	0	0	0	3	3.86E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215907079	11	84256296	G	C	DLG2	CCDS41696.1	r.?	-	-	intronic	29	0	0	76	15	19.73684211	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0.00625	0.99375	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215908012	11	91202143	T	C	-	-	-	-	-	-	45	0	0	76	13	17.10526316	144	0	0	232	37	15.94827586							4	2	2	1	NA	NA	NA	unphased	0.845201238	0.845201238	1	0	0.0025	0.9975	0	0	0	0	3	1.39E-16	1	3.28E-43	1	YES	somatic	1_1
1353824	PD9772b	1215908076	11	91785417	G	C	-	-	-	-	-	-	37	0	0	67	14	20.89552239	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.032484636	1.032484636	1	0	0.0025	0.9975	0	0	0	0	3	4.66E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215908094	11	91910054	G	C	-	-	-	-	-	-	43	0	0	75	11	14.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.724705882	0.724705882	1	0	0.03125	0.96875	0	0	0	0	3	1.78E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215908187	11	92533531	T	C	FAT3	CCDS44706.1	r.7369u>c	c.7352T>C	p.I2451T	missense	29	0	0	79	17	21.51898734	265	0	0	52	7	13.46153846							4	2	2	1	NA	NA	NA	unphased	1.063291139	1.063291139	1	0	0	1	0	0	0	0	3	4.55E-23	1	8.58E-09	1	YES	somatic	1_1
1353824	PD9772b	1215908208	11	92712902	G	C	MTNR1B	CCDS8290.1	r.?	-	-	intronic	23	0	0	57	11	19.29824561	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.953560372	0.953560372	1	0	0.0075	0.9925	0	0	0	0	3	7.29E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215908534	11	95011213	A	C	-	-	-	-	-	-	29	0	0	85	16	18.82352941	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.930103806	0.930103806	1	0	0.00125	0.99875	0	0	0	0	3	8.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215908612	11	95669773	G	C	-	-	-	-	-	-	34	0	0	63	15	23.80952381	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.93837535	0.93837535	1	0	0.0025	0.9975	0	0	0	0	3	2.97E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215908856	11	98228007	T	C	-	-	-	-	-	-	35	0	0	56	12	21.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.844537815	0.844537815	1	0	0.01125	0.98875	0	0	0	0	3	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215909294	11	102214735	G	C	BIRC2	CCDS8316.1	r.?	-	-	upstream	35	0	0	70	15	21.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.844537815	0.844537815	1	0	0.00625	0.99375	0	0	0	0	3	1.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215909540	11	104600191	T	C	-	-	-	-	-	-	32	0	0	83	24	28.91566265	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.139617293	1.139617293	1	0	0	1	0	0	0	0	3	2.06E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215909651	11	105527347	T	C	GRIA4	CCDS41706.1	r.?	-	-	intronic	32	0	0	65	17	26.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.030769231	1.030769231	1	0	0.00375	0.99625	0	0	0	0	3	1.14E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215910178	11	110682793	T	C	-	-	-	-	-	-	30	0	0	56	15	26.78571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.055672269	1.055672269	1	0	0	1	0	0	0	0	3	4.09E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215910839	11	115405278	T	C	-	-	-	-	-	-	40	0	0	63	10	15.87301587	1	0	0	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.784313725	0.784313725	1	0	0.0275	0.9725	0	0	0	0	3	9.81E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215910917	11	115939462	A	C	-	-	-	-	-	-	32	0	0	41	10	24.3902439	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0.00375	0.99625	0	0	0	0	3	9.51E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215911089	11	117100981	G	C	PCSK7	CCDS8382.1	r.?	-	-	intronic	40	0	0	48	9	18.75	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.0075	0.9925	0	0	0	0	3	2.75E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215911151	11	117777270	G	C	TMPRSS13	CCDS41721.1	r.?	-	-	intronic	34	0	0	75	22	29.33333333	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.449411765	0.724705882	2	0	0.025	0.975	0	0	0	0	3	9.55E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215911581	11	122071324	T	C	-	-	-	-	-	-	41	0	0	66	19	28.78787879	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.134581105	1.134581105	1	0	0	1	0	0	0	0	3	2.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215911875	11	125293817	G	C	PKNOX2	CCDS41730.1	r.?	-	-	intronic	27	0	0	59	15	25.42372881	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.001994018	1.001994018	1	0	0.0025	0.9975	0	0	0	0	3	9.90E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215912484	11	131524594	G	C	OPCML	CCDS41733.1	r.?	-	-	intronic	28	0	0	17	7	41.17647059	2	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.62283737	1.62283737	1	0	0.00125	0.99875	0	0	0	0	3	1.45E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215912640	11	133308587	G	C	ENSG00000183715	CCDS31722.1	r.?	-	-	intronic	33	0	0	56	16	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	5.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215912740	11	134897134	G	C	-	-	-	-	-	-	47	0	0	62	12	19.35483871	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.762808349	0.762808349	1	0	0.0175	0.9825	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215913628	12	4083809	G	C	-	-	-	-	-	-	31	0	0	61	8	13.1147541	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.648023144	0.648023144	1	0	0.04875	0.95125	0	0	0	0	3	9.09E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215914216	12	6967664	G	C	USP5	CCDS41743.1	r.1000g>c	c.941G>C	p.G314A	missense	37	0	0	63	8	12.6984127	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.62745098	0.62745098	1	0.00375	0.07	0.92625	0	0	0	0	3	1.18E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215914501	12	8294064	A	C	ZNF705A	CCDS31737.1	r.?	-	-	intronic	31	0	0	97	11	11.34020619	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.787143723	0.787143723	1	0.00125	0.0125	0.98625	0	0	0	0	3	3.27E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215914535	12	8369931	G	C	FAM90A1	CCDS31738.1	r.?	-	-	downstream	30	0	0	117	34	29.05982906	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.017094017	1.008547009	2	0	0	1	0	0	0	0	3	1.32E-49	1	1	1	NA	NA	NA
1353824	PD9772b	1215914905	12	10063998	T	C	CLEC2A	CCDS44829.1	r.?	-	-	downstream	37	0	0	106	9	8.490566038	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.589345172	0.589345172	1	0.0025	0.11625	0.88125	0	0	0	0	3	4.15E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215914908	12	10110904	T	C	-	-	-	-	-	-	26	0	0	113	23	20.3539823	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.41280583	0.706402915	2	0	0.0275	0.9725	0	0	0	0	3	4.50E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215915040	12	10531045	G	C	KLRK1	CCDS8623.1	r.?	-	-	intronic	35	0	0	113	9	7.96460177	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.552837064	0.552837064	1	0.00375	0.1575	0.83875	0	0	0	0	3	7.30E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215915085	12	10691953	G	C	-	-	-	-	-	-	31	0	0	111	16	14.41441441	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.000529942	1.000529942	1	0	0	1	0	0	0	0	3	7.95E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215915307	12	11220395	G	C	TAS2R43	ENST00000422992	r.?	-	-	intronic	69	0	0	221	30	13.57466063	0	0	NA	2	0	0							6	4	2	1	NA	NA	NA	unphased	0.94224115	0.94224115	1	0	0	1	0	0	0	0	3	3.80E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215915464	12	11494911	T	C	-	-	-	-	-	-	37	0	0	113	50	44.24778761	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	3.071317022	1.023772341	3	0	0	1	0	0	0	0	3	2.41E-83	1	1	1	NA	NA	NA
1353824	PD9772b	1215915830	12	12875738	A	C	APOLD1	CCDS44833.1	r.?	-	-	upstream	39	0	0	98	11	11.2244898	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.779111645	0.779111645	1	0	0.0125	0.9875	0	0	0	0	3	3.67E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215915847	12	12941626	G	C	APOLD1	CCDS44833.1	r.1950g>c	c.?	p.?	3'UTR variant	37	0	0	108	12	11.11111111	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.77124183	0.77124183	1	0	0.015	0.985	0	0	0	0	3	4.37E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215916043	12	13837725	G	C	GRIN2B	CCDS8662.1	r.?	-	-	intronic	50	0	0	121	10	8.26446281	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.573650948	0.573650948	1	0.00125	0.12875	0.87	0	0	0	0	3	7.46E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215916072	12	14001211	G	C	GRIN2B	CCDS8662.1	r.?	-	-	intronic	28	0	0	110	14	12.72727273	278	0	0	691	63	9.117221418							6	4	2	1	NA	NA	NA	unphased	0.88342246	0.88342246	1	0	0.00375	0.99625	0	0	0	0	3	7.16E-16	1	1.03E-56	1	YES	somatic	1_1
1353824	PD9772b	1215916185	12	14517767	G	C	ATF7IP	CCDS8663.1	r.?	-	-	upstream	36	0	0	66	7	10.60606061	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.736185383	0.736185383	1	0.00125	0.025	0.97375	0	0	0	0	3	4.70E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215916302	12	14990279	G	C	ART4	CCDS8668.1	r.?	-	-	intronic	39	0	0	110	17	15.45454545	0	0	NA	0	0	NA							7	4	3	1	NA	NA	NA	unphased	1.227272727	1.227272727	1	0	0	1	0	0	0	0	3	1.90E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215916308	12	15023762	G	C	-	-	-	-	-	-	37	0	0	119	32	26.8907563	0	0	NA	0	0	NA							7	4	3	1	NA	NA	NA	unphased	2.135442412	1.067721206	2	0	0	1	0	0	0	0	3	1.53E-45	1	1	1	NA	NA	NA
1353824	PD9772b	1215916462	12	15815155	A	C	EPS8	CCDS31753.1	r.?	-	-	intronic	26	0	0	95	15	15.78947368	307	0	0	453	22	4.856512141							6	4	2	1	NA	NA	NA	unphased	1.095975232	1.095975232	1	0	0.00125	0.99875	0	0	0	0	3	2.31E-18	1	4.37E-15	1	YES	somatic	1_1
1353824	PD9772b	1215916488	12	16009356	T	C	-	-	-	-	-	-	41	0	0	109	45	41.28440367	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.865623314	0.955207771	3	0	0	1	0	0	0	0	3	1.98E-73	1	1	1	NA	NA	NA
1353824	PD9772b	1215916836	12	17808970	G	C	-	-	-	-	-	-	29	0	0	100	16	16	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.110588235	1.110588235	1	0	0.00125	0.99875	0	0	0	0	3	1.38E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215916940	12	18338714	T	C	-	-	-	-	-	-	41	0	0	119	24	20.16806723	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.399901137	0.699950568	2	0	0.0425	0.9575	0	0	0	0	3	3.28E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215917188	12	19584490	A	C	-	-	-	-	-	-	37	0	0	114	49	42.98245614	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.983488132	0.994496044	3	0	0	1	0	0	0	0	3	6.54E-81	1	1	1	NA	NA	NA
1353824	PD9772b	1215917421	12	20504297	G	C	-	-	-	-	-	-	45	0	0	141	20	14.18439716	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.984564038	0.984564038	1	0	0	1	0	0	0	0	3	5.16E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215917451	12	20623914	G	C	PDE3A	CCDS31754.1	r.?	-	-	intronic	34	0	0	103	18	17.47572816	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.213021131	1.213021131	1	0	0	1	0	0	0	0	3	1.40E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215917566	12	20986250	T	C	SLCO1B3	CCDS8684.1	r.?	-	-	intronic	51	0	0	97	13	13.40206186	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.930260764	0.930260764	1	0	0.00375	0.99625	0	0	0	0	3	3.85E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215917572	12	20999819	G	C	SLCO1B3	CCDS8684.1	r.?	-	-	intronic	35	0	0	119	38	31.93277311	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.216510133	1.108255067	2	0	0	1	0	0	0	0	3	4.50E-57	1	1	1	NA	NA	NA
1353824	PD9772b	1215917729	12	21567447	A	C	SLCO1A2	ENST00000435179	r.?	-	-	intronic	39	0	0	117	19	16.23931624	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.127199598	1.127199598	1	0	0.00125	0.99875	0	0	0	0	3	4.14E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215917832	12	21991025	T	C	ABCC9	CCDS8693.1	r.3573a>g	c.3553A>G	p.I1185V	missense	38	0	0	104	20	19.23076923	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.334841629	1.334841629	1	0	0	1	0	0	0	0	3	8.16E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215918217	12	24014768	A	C	SOX5	CCDS8699.1	r.?	-	-	intronic	31	0	0	65	13	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	1.57E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215918275	12	24464430	T	C	-	-	-	-	-	-	41	0	0	82	14	17.07317073	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.843615495	0.843615495	1	0	0.00375	0.99625	0	0	0	0	3	9.77E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215918378	12	25227953	G	C	LRMP	CCDS8701.1	r.?	-	-	intronic	36	0	0	75	14	18.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0	1	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215918770	12	27619611	T	C	C12orf70	CCDS44852.1	r.?	-	-	upstream	30	0	0	66	10	15.15151515	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.900178253	0.900178253	1	0	0.0075	0.9925	0	0	0	0	3	1.60E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215919024	12	29422489	A	C	FAR2	CCDS8717.1	r.?	-	-	intronic	37	0	0	75	12	16	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0	0.00875	0.99125	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215919252	12	31001384	G	C	-	-	-	-	-	-	28	0	0	27	7	25.92592593	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.281045752	1.281045752	1	0	0.0025	0.9975	0	0	0	0	3	6.36E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215919399	12	32049952	G	C	-	-	-	-	-	-	30	0	0	63	20	31.74603175	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.568627451	0.784313725	2	0	0.0075	0.9925	0	0	0	0	3	1.05E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215919538	12	33019109	A	C	PKP2	CCDS8731.1	r.?	-	-	intronic	28	0	0	86	21	24.41860465	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.206566347	1.206566347	1	0	0	1	0	0	0	0	3	2.01E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215919598	12	33430597	G	C	-	-	-	-	-	-	29	0	0	67	12	17.91044776	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.884986831	0.884986831	1	0	0.0075	0.9925	0	0	0	0	3	1.14E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215919620	12	33531965	A	C	SYT10	CCDS8732.1	r.?	-	-	intronic	37	0	0	74	10	13.51351351	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.66772655	0.66772655	1	0	0.03875	0.96125	0	0	0	0	3	5.24E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215919713	12	34231485	A	C	AC046130.1	ENST00000501954	r.?	-	-	intronic	46	0	0	77	12	15.58441558	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.770053476	0.770053476	1	0	0.0125	0.9875	0	0	0	0	3	6.64E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215920279	12	37895366	A	C	-	-	-	-	-	-	25	0	0	84	9	10.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.529411765	0.529411765	1	0.01	0.20875	0.78125	0	0	0	0	3	5.13E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215921203	12	39191571	T	C	CPNE8	CCDS8733.1	r.?	-	-	intronic	34	0	0	71	9	12.67605634	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	1.10E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215921204	12	39191577	A	C	CPNE8	CCDS8733.1	r.?	-	-	intronic	33	0	0	71	5	7.042253521	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	3.09E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215921772	12	44279422	A	C	TMEM117	CCDS8745.1	r.?	-	-	intronic	43	0	0	50	9	18	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.709411765	0.709411765	1	0	0.0375	0.9625	0	0	0	0	3	4.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215922683	12	53507789	G	C	SOAT2	CCDS8847.1	r.?	-	-	intronic	33	0	0	53	10	18.86792453	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.743618202	0.743618202	1	0	0.02	0.98	0	0	0	0	3	1.57E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215922736	12	54042574	G	C	-	-	-	-	-	-	34	0	0	33	10	30.3030303	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.1942959	1.1942959	1	0	0	1	0	0	0	0	3	8.14E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215923067	12	55938814	T	C	-	-	-	-	-	-	40	0	0	63	20	31.74603175	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.251167134	1.251167134	1	0	0	1	0	0	0	0	3	1.05E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215923299	12	58133267	G	C	AGAP2	CCDS44932.1	r.?	-	-	upstream	36	0	0	43	15	34.88372093	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.723666211	0.861833105	2	0	0.00625	0.99375	0	0	0	0	3	4.05E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215923712	12	61706052	T	C	-	-	-	-	-	-	32	0	0	85	19	22.35294118	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.10449827	1.10449827	1	0	0	1	0	0	0	0	3	5.93E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215923770	12	62029619	A	C	-	-	-	-	-	-	32	0	0	75	10	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0	0.04375	0.95625	0	0	0	0	3	6.02E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215924255	12	65547996	T	C	-	-	-	-	-	-	21	0	0	77	15	19.48051948	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.962566845	0.962566845	1	0	0.0025	0.9975	0	0	0	0	3	8.05E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215924959	12	70339362	T	C	C12orf28	ENST00000299350	r.?	-	-	intronic	32	0	0	50	8	16	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0	0.0175	0.9825	0	0	0	0	3	1.74E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215925055	12	70944044	G	C	PTPRB	CCDS44943.1	r.?	-	-	intronic	33	0	0	75	10	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0	0.05125	0.94875	0	0	0	0	3	6.02E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215925148	12	71533036	T	C	TSPAN8	CCDS8999.1	r.?	-	-	intronic	54	0	0	110	24	21.81818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.078074866	1.078074866	1	0	0	1	0	0	0	0	3	4.16E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215925303	12	72955594	A	C	TRHDE	CCDS9004.1	r.?	-	-	intronic	36	0	0	69	12	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.005	0.995	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215925613	12	75375416	G	C	-	-	-	-	-	-	40	0	0	76	17	22.36842105	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.881578947	0.881578947	1	0	0.005	0.995	0	0	0	0	3	2.21E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215926154	12	81062627	G	C	PTPRQ	ENST00000418574	r.?	-	-	intronic	41	0	0	68	24	35.29411765	6	0	0	3	0	0							3	2	1	1	NA	NA	NA	unphased	1.39100346	0.69550173	2	0	0.055	0.945	0	0	0	0	3	7.25E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215926212	12	81803699	A	C	PPFIA2	ENST00000443686	r.?	-	-	intronic	49	0	0	65	12	18.46153846	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.72760181	0.72760181	1	0	0.02875	0.97125	0	0	0	0	3	7.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215926569	12	85934188	T	C	-	-	-	-	-	-	33	0	0	75	25	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	1.23E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215926668	12	86960828	A	C	-	-	-	-	-	-	43	0	0	65	16	24.61538462	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.970135747	0.970135747	1	0	0	1	0	0	0	0	3	7.85E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215927252	12	92446892	A	C	-	-	-	-	-	-	27	0	0	80	21	26.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.297058824	1.297058824	1	0	0	1	0	0	0	0	3	3.63E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215927286	12	92716814	G	C	-	-	-	-	-	-	33	0	0	49	10	20.40816327	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.008403361	1.008403361	1	0	0.0025	0.9975	0	0	0	0	3	6.72E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215928253	12	98944005	A	C	TMPO	CCDS31879.1	r.?	-	-	downstream	42	0	0	69	7	10.14492754	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.501278772	0.501278772	1	0.01375	0.22375	0.7625	0	0	0	0	3	6.43E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215928366	12	100060804	A	C	ANKS1B	ENST00000329257	r.?	-	-	intronic	47	0	0	33	5	15.15151515	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	0.748663102	0.748663102	1	0	0.02625	0.97375	0	0	0	0	3	6.60E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215928451	12	100859443	G	C	-	-	-	-	-	-	29	0	0	84	20	23.80952381	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.176470588	1.176470588	1	0	0	1	0	0	0	0	3	7.54E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215928832	12	103885435	G	C	C12orf42	CCDS44963.1	r.?	-	-	intronic	30	0	0	72	18	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215928878	12	104239138	G	C	NT5DC3	CCDS41824.1	r.?	-	-	upstream	46	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0	1	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215928884	12	104280981	G	C	ENSG00000187809	ENST00000434328	r.?	-	-	upstream	41	0	0	42	11	26.19047619	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.294117647	1.294117647	1	0	0.00375	0.99625	0	0	0	0	3	1.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215929002	12	104919745	T	C	CHST11	CCDS9099.1	r.?	-	-	intronic	30	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0	1	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215929074	12	105620192	G	C	APPL2	CCDS9101.1	r.?	-	-	intronic	40	0	0	82	20	24.3902439	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0	1	0	0	0	0	3	4.40E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215929118	12	105851277	G	C	-	-	-	-	-	-	32	0	0	107	23	21.4953271	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.062122045	1.062122045	1	0	0	1	0	0	0	0	3	1.14E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215929582	12	109526021	G	C	ALKBH2	CCDS31897.1	r.1169c>g	c.776C>G	p.T259S	missense	39	0	0	58	10	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0	0.01	0.99	0	0	0	0	3	4.10E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215929974	12	112646286	T	C	C12orf51	CCDS44978.1	r.?	-	-	intronic	31	0	0	72	13	18.05555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.892156863	0.892156863	1	0	0.00625	0.99375	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215930371	12	116356135	G	C	-	-	-	-	-	-	38	0	0	69	13	18.84057971	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.742540494	0.742540494	1	0.00125	0.02125	0.9775	0	0	0	0	3	3.64E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215931065	12	123195407	A	C	GPR81	CCDS9236.1	r.?	-	-	intronic	31	0	0	75	7	9.333333333	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.208514223	0.711884695	0.292904489	0.00125	0.02625	0.9725	0	0	0	0	3	1.15E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215931349	12	126288058	A	C	-	-	-	-	-	-	28	0	0	22	7	31.81818182	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.710843942	0.710843942	1	0	0.03625	0.96375	0	0	0	0	3	1.25E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215931389	12	126748282	G	C	-	-	-	-	-	-	17	0	0	54	4	7.407407407	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.165487479	0.564987853	0.292904489	0.0075	0.0625	0.93	0	0	0	0	3	0.000161898	1	1	1	NA	NA	NA
1353824	PD9772b	1215931745	12	129686903	A	C	TMEM132D	CCDS9266.1	r.?	-	-	intronic	35	0	0	63	21	33.33333333	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.744693653	0.744693653	1	0	0.02125	0.97875	0	0	0	0	3	1.08E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215932319	13	19155229	G	C	-	-	-	-	-	-	11	0	0	21	4	19.04761905	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.75070028	0.75070028	1	0.00125	0.03375	0.965	0	0	0	0	3	3.49E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215932423	13	19358583	A	C	-	-	-	-	-	-	39	0	0	46	7	15.2173913	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.599744246	0.599744246	1	0.0025	0.095	0.9025	0	0	0	0	3	3.53E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215932777	13	20425606	G	C	ZMYM5	CCDS45015.1	r.?	-	-	intronic	26	0	0	53	14	26.41509434	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.041065483	1.041065483	1	0	0	1	0	0	0	0	3	1.22E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215932972	13	21896580	T	C	-	-	-	-	-	-	31	0	0	34	7	20.58823529	1	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.811418685	0.811418685	1	0	0.02125	0.97875	0	0	0	0	3	3.73E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215933109	13	23305795	A	C	-	-	-	-	-	-	43	0	0	45	11	24.44444444	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.963398693	0.963398693	1	0	0.005	0.995	0	0	0	0	3	4.24E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215933117	13	23389371	A	C	-	-	-	-	-	-	22	0	0	24	6	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00625	0.99375	0	0	0	0	3	1.95E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215933560	13	27377662	G	C	-	-	-	-	-	-	39	0	0	64	25	39.0625	2	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.539522059	0.769761029	2	0	0.00625	0.99375	0	0	0	0	3	9.90E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1215934103	13	32300554	T	C	-	-	-	-	-	-	26	0	0	54	15	27.77777778	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.094771242	1.094771242	1	0	0	1	0	0	0	0	3	2.20E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215934227	13	33694076	A	C	STARD13	CCDS9350.1	r.?	-	-	intronic	35	0	0	60	12	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.0125	0.9875	0	0	0	0	3	2.74E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215934509	13	36557026	G	C	DCLK1	CCDS9354.1	r.?	-	-	intronic	27	0	0	53	14	26.41509434	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.041065483	1.041065483	1	0	0	1	0	0	0	0	3	1.22E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215934781	13	39245263	G	C	-	-	-	-	-	-	31	0	0	68	21	30.88235294	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.217128028	1.217128028	1	0	0	1	0	0	0	0	3	7.15E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215934820	13	39707965	A	C	-	-	-	-	-	-	43	0	0	56	8	14.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.56302521	0.56302521	1	0.0025	0.1625	0.835	0	0	0	0	3	4.48E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215935516	13	46309808	A	C	-	-	-	-	-	-	25	0	0	49	19	38.7755102	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.528211285	0.764105642	2	0	0.0125	0.9875	0	0	0	0	3	3.12E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215935856	13	49575296	T	C	FNDC3A	CCDS41886.1	r.?	-	-	intronic	32	0	0	80	18	22.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.886764706	0.886764706	1	0	0.00125	0.99875	0	0	0	0	3	1.01E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215935858	13	49581623	G	C	FNDC3A	CCDS41886.1	r.?	-	-	intronic	23	0	0	54	16	29.62962963	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.167755991	1.167755991	1	0	0	1	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215936364	13	55211369	A	C	-	-	-	-	-	-	37	0	0	56	10	17.85714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.703781513	0.703781513	1	0	0.03875	0.96125	0	0	0	0	3	2.82E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215936378	13	55424106	T	C	-	-	-	-	-	-	43	0	0	51	11	21.56862745	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.85005767	0.85005767	1	0	0.01	0.99	0	0	0	0	3	1.94E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215936479	13	56315776	A	C	-	-	-	-	-	-	46	0	0	47	12	25.53191489	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.006257822	1.006257822	1	0	0.00125	0.99875	0	0	0	0	3	1.09E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215936540	13	56860344	G	C	-	-	-	-	-	-	33	0	0	67	17	25.37313433	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1	1	1	0	0.00125	0.99875	0	0	0	0	3	2.03E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215937033	13	61426063	T	C	-	-	-	-	-	-	36	0	0	60	15	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215937131	13	62447599	A	C	-	-	-	-	-	-	38	0	0	53	22	41.50943396	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.635960044	0.817980022	2	0	0.00125	0.99875	0	0	0	0	3	9.50E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1215937134	13	62489787	T	C	-	-	-	-	-	-	35	0	0	64	12	18.75	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.738970588	0.738970588	1	0	0.02625	0.97375	0	0	0	0	3	6.30E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215937900	13	68125111	G	C	-	-	-	-	-	-	48	0	0	53	15	28.30188679	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.115427303	1.115427303	1	0	0.00125	0.99875	0	0	0	0	3	1.60E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215939036	13	79381193	T	C	-	-	-	-	-	-	34	0	0	49	5	10.20408163	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.402160864	0.402160864	1	0.04375	0.36875	0.5875	0	0	0	0	3	4.96E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215939094	13	79976022	T	C	RBM26	CCDS9462.1	r.?	-	-	intronic	35	0	0	59	16	27.11864407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.068793619	1.068793619	1	0	0	1	0	0	0	0	3	1.37E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215939205	13	81187563	T	C	-	-	-	-	-	-	55	0	0	70	18	25.71428571	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.013445378	1.013445378	1	0	0	1	0	0	0	0	3	6.91E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215939216	13	81380869	G	C	-	-	-	-	-	-	29	0	0	69	16	23.1884058	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.913895993	0.913895993	1	0	0.0025	0.9975	0	0	0	0	3	2.27E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215939338	13	82526158	T	C	-	-	-	-	-	-	41	0	0	62	13	20.96774194	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.826375712	0.826375712	1	0	0.00875	0.99125	0	0	0	0	3	8.08E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215939519	13	84165367	T	C	-	-	-	-	-	-	41	0	0	64	22	34.375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.354779412	1.354779412	1	0	0	1	0	0	0	0	3	1.57E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215939581	13	84966313	G	C	-	-	-	-	-	-	32	0	0	75	21	28	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.103529412	1.103529412	1	0	0	1	0	0	0	0	3	7.75E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215939654	13	85839244	T	C	-	-	-	-	-	-	27	0	0	84	23	27.38095238	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.079131653	1.079131653	1	0	0	1	0	0	0	0	3	2.25E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215939811	13	87230268	T	C	-	-	-	-	-	-	32	0	0	57	16	28.07017544	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.10629515	1.10629515	1	0	0	1	0	0	0	0	3	7.28E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215940058	13	89672255	T	C	-	-	-	-	-	-	39	0	0	55	13	23.63636364	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.931550802	0.931550802	1	0	0.00125	0.99875	0	0	0	0	3	1.46E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215940075	13	89777479	A	C	-	-	-	-	-	-	34	0	0	62	17	27.41935484	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.080645161	1.080645161	1	0	0	1	0	0	0	0	3	4.56E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215940263	13	91241211	G	C	-	-	-	-	-	-	34	0	0	55	16	29.09090909	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.146524064	1.146524064	1	0	0.00125	0.99875	0	0	0	0	3	3.78E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215940663	13	95292414	G	C	-	-	-	-	-	-	38	0	0	33	10	30.3030303	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.1942959	1.1942959	1	0	0.00125	0.99875	0	0	0	0	3	8.14E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215940729	13	96069695	G	C	-	-	-	-	-	-	42	0	0	71	19	26.76056338	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.054681027	1.054681027	1	0	0	1	0	0	0	0	3	1.29E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215940956	13	98504393	T	C	-	-	-	-	-	-	33	0	0	51	18	35.29411765	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.39100346	1.39100346	1	0	0	1	0	0	0	0	3	9.10E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215941038	13	99306050	A	C	-	-	-	-	-	-	38	0	0	27	9	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.00375	0.99625	0	0	0	0	3	8.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215941048	13	99433279	T	C	-	-	-	-	-	-	37	0	0	64	19	29.6875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.170036765	1.170036765	1	0	0.00125	0.99875	0	0	0	0	3	1.34E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215941233	13	101182613	G	C	PCCA	CCDS9496.2	r.2418g>c	c.?	p.?	3'UTR variant	34	0	0	51	20	39.21568627	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.5455594	0.7727797	2	0	0.01125	0.98875	0	0	0	0	3	6.38E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215941288	13	101852781	T	C	NALCN	CCDS9498.1	r.?	-	-	intronic	34	0	0	72	19	26.38888889	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.04003268	1.04003268	1	0	0	1	0	0	0	0	3	1.75E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215941416	13	103312756	G	C	TPP2	CCDS9502.1	r.?	-	-	intronic	38	0	0	67	16	23.88059701	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.0025	0.9975	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215941441	13	103591138	G	C	-	-	-	-	-	-	36	0	0	67	16	23.88059701	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.00125	0.99875	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215941528	13	104579126	G	C	-	-	-	-	-	-	33	0	0	54	11	20.37037037	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.802832244	0.802832244	1	0.00125	0.01375	0.985	0	0	0	0	3	3.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215942080	13	110111762	G	C	-	-	-	-	-	-	23	0	0	64	23	35.9375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.416360294	0.708180147	2	0	0.0425	0.9575	0	0	0	0	3	1.44E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215942340	13	112821260	G	C	-	-	-	-	-	-	29	0	0	80	16	20	0	0	NA	0	0	NA							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.41642108	0.41642108	1	0.08	0.90125	0.01875	0	0	0	0	2	3.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215942506	13	114101839	T	C	ADPRHL1	CCDS9536.1	r.?	-	-	intronic	29	0	0	20	5	25	343	3	0.874635569	20	0	0							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.52052635	0.52052635	1	0.0125	0.1575	0.83	0	0	0	0	3	4.55E-08	1	1	0.246551675	NA	NA	NA
1353824	PD9772b	1215943822	14	20859754	T	C	TEP1	CCDS9548.1	r.2138+4a>g	c.2097+4A>G	p.?	splice region	30	0	0	47	12	25.53191489	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.006257822	1.006257822	1	0	0.0025	0.9975	0	0	0	0	3	1.09E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215944058	14	23195326	G	C	-	-	-	-	-	-	37	0	0	14	3	21.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.844537815	0.844537815	1	0.0025	0.02125	0.97625	0	0	0	0	3	4.37E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215944215	14	25042474	A	C	CTSG	CCDS9631.1	r.?	-	-	downstream	36	0	0	65	20	30.76923077	0	0	NA	1	0	0							3	2	1	1	NA	NA	NA	unphased	1.212669683	1.212669683	1	0	0	1	0	0	0	0	3	2.18E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215944223	14	25168341	A	C	-	-	-	-	-	-	35	0	0	84	21	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	1.15E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215944702	14	29020022	A	C	-	-	-	-	-	-	44	0	0	72	17	23.61111111	185	0	0	137	20	14.59854015							3	2	1	1	NA	NA	NA	unphased	0.930555556	0.930555556	1	0	0.00375	0.99625	0	0	0	0	3	7.97E-24	1	2.83E-23	1	YES	somatic	1_1
1353824	PD9772b	1215944714	14	29204679	T	C	-	-	-	-	-	-	36	0	0	58	14	24.13793103	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.951318458	0.951318458	1	0	0.00125	0.99875	0	0	0	0	3	5.04E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215944826	14	30610489	A	C	-	-	-	-	-	-	46	0	0	62	20	32.25806452	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.271347249	1.271347249	1	0	0	1	0	0	0	0	3	7.19E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215945130	14	33687590	T	C	NPAS3	CCDS9645.1	r.?	-	-	intronic	40	0	0	77	24	31.16883117	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.22841864	1.22841864	1	0	0	1	0	0	0	0	3	2.53E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215945262	14	35094827	G	C	SNX6	CCDS9648.1	r.?	-	-	intronic	29	0	0	27	8	29.62962963	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.167755991	1.167755991	1	0	0.00875	0.99125	0	0	0	0	3	7.97E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215946775	14	50509656	A	C	-	-	-	-	-	-	34	0	0	42	13	30.95238095	0	0	NA	0	0	NA							3.829257977	2	1	0.170742023	3	1	0.829257977	unphased	1.476563043	1.476563043	1	0	0	1	0	0	0	0	3	2.72E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215946810	14	50683300	A	C	SOS2	CCDS9697.1	r.?	-	-	intronic	28	0	0	17	5	29.41176471	0	0	NA	0	0	NA							3.829257977	2	1	0.170742023	3	1	0.829257977	unphased	1.403068955	1.403068955	1	0	0.00625	0.99375	0	0	0	0	3	1.84E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215947396	14	56783487	A	C	-	-	-	-	-	-	35	0	0	60	12	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.01375	0.98625	0	0	0	0	3	2.74E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215947534	14	58022198	T	C	-	-	-	-	-	-	30	0	0	45	15	33.33333333	0	0	NA	2	2	100							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	9.14E-24	1	2.50E-05	1	NA	NA	NA
1353824	PD9772b	1215947679	14	59490917	T	C	-	-	-	-	-	-	38	0	0	63	15	23.80952381	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.93837535	0.93837535	1	0	0.00125	0.99875	0	0	0	0	3	2.97E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215948692	14	69609995	T	C	DCAF5	CCDS32106.1	r.?	-	-	intronic	37	0	0	61	16	26.2295082	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.033751205	1.033751205	1	0	0	1	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215948845	14	71356472	G	C	-	-	-	-	-	-	25	0	0	48	18	37.5	1	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.477941176	0.738970588	2	0	0.02125	0.97875	0	0	0	0	3	2.42E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215949420	14	76846337	A	C	ESRRB	ENST00000512784	r.?	-	-	intronic	33	0	0	35	13	37.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.463865546	1.463865546	1	0	0	1	0	0	0	0	3	1.63E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215949621	14	78484013	T	C	-	-	-	-	-	-	40	0	0	58	15	25.86206897	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.019269777	1.019269777	1	0	0	1	0	0	0	0	3	7.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215950241	14	85095640	A	C	-	-	-	-	-	-	38	0	0	61	21	34.42622951	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.356798457	1.356798457	1	0	0	1	0	0	0	0	3	4.80E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215950579	14	88010294	T	C	-	-	-	-	-	-	46	0	0	80	14	17.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.689705882	0.689705882	1	0.00125	0.04375	0.955	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215951419	14	96914419	T	C	AK7	CCDS9945.1	r.?	-	-	intronic	32	0	0	38	11	28.94736842	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.140866873	1.140866873	1	0	0.0025	0.9975	0	0	0	0	3	5.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215951420	14	96914831	G	C	AK7	CCDS9945.1	r.?	-	-	intronic	21	0	0	56	15	26.78571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.055672269	1.055672269	1	0	0	1	0	0	0	0	3	4.09E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215951644	14	99248941	G	C	-	-	-	-	-	-	32	0	0	44	9	20.45454545	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.806149733	0.806149733	1	0	0.0125	0.9875	0	0	0	0	3	1.18E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215951672	14	99687731	T	C	BCL11B	CCDS9949.1	r.?	-	-	intronic	37	0	0	21	6	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0.00375	0.99625	0	0	0	0	3	7.95E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215951694	14	99880993	T	C	SETD3	CCDS9951.1	r.?	-	-	intronic	41	0	0	52	15	28.84615385	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.136877828	1.136877828	1	0	0	1	0	0	0	0	3	1.15E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215954529	15	22391192	T	C	-	-	-	-	-	-	76	0	0	161	21	13.04347826	0	0	NA	0	0	NA							2.46797913	2	0	0.53202087	2	1	0.46797913	unphased	0.44467247	0.950197223	0.46797913	0	0	1	0	0	0	0	3	2.69E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215954666	15	22862193	T	C	TUBGCP5	CCDS10008.1	r.?	-	-	intronic	25	0	0	53	11	20.75471698	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	1.002561787	1.002561787	1	0	0.00375	0.99625	0	0	0	0	3	3.07E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215954823	15	23841995	G	C	-	-	-	-	-	-	41	0	0	36	6	16.66666667	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	0.805087496	0.905255356	0.889348503	0	0.0225	0.9775	0	0	0	0	3	2.68E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215954832	15	23898142	T	C	-	-	-	-	-	-	28	0	0	85	22	25.88235294	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	1.250253523	1.250253523	1	0	0	1	0	0	0	0	3	2.23E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215954873	15	24125345	G	C	-	-	-	-	-	-	49	0	0	57	7	12.28070175	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	0.593222365	0.667030262	0.889348503	0.00125	0.04375	0.955	0	0	0	0	3	1.66E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215955061	15	24868583	T	C	-	-	-	-	-	-	29	0	0	81	26	32.09876543	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	1.55053888	0.77526944	2	0	0.00625	0.99375	0	0	0	0	3	1.29E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1215955296	15	26734963	G	C	-	-	-	-	-	-	31	0	0	67	12	17.91044776	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	0.865168652	0.972811726	0.889348503	0	0.005	0.995	0	0	0	0	3	1.14E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215955432	15	28005651	G	C	OCA2	CCDS10020.1	r.?	-	-	intronic	38	0	0	97	16	16.49484536	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	0.796787624	0.895922827	0.889348503	0	0.00125	0.99875	0	0	0	0	3	8.26E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215955447	15	28090102	T	C	OCA2	CCDS10020.1	r.2588+3a>g	c.2432+3A>G	p.?	splice region	32	0	0	48	15	31.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.231617647	1.231617647	1	0	0.00125	0.99875	0	0	0	0	3	2.86E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215955465	15	28334833	T	C	OCA2	CCDS10020.1	r.?	-	-	intronic	36	0	0	60	15	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215955530	15	28976242	G	C	-	-	-	-	-	-	28	0	0	29	9	31.03448276	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.223123732	1.223123732	1	0	0	1	0	0	0	0	3	1.79E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215956005	15	34119294	G	C	RYR3	CCDS45210.1	r.?	-	-	intronic	34	0	0	36	10	27.77777778	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.094771242	1.094771242	1	0	0.0025	0.9975	0	0	0	0	3	2.21E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215956779	15	42776667	T	C	-	-	-	-	-	-	32	0	0	50	11	22	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.867058824	0.867058824	1	0	0.0075	0.9925	0	0	0	0	3	1.52E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215956819	15	43147234	G	C	TTBK2	CCDS42029.1	r.?	-	-	intronic	33	0	0	82	19	23.17073171	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.913199426	0.913199426	1	0	0	1	0	0	0	0	3	2.79E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215957110	15	46076056	T	C	-	-	-	-	-	-	43	0	0	35	5	14.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.56302521	0.56302521	1	0.00625	0.09375	0.9	0	0	0	0	3	8.95E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215957423	15	47619927	G	C	-	-	-	-	-	-	29	0	0	53	11	20.75471698	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.817980022	0.817980022	1	0	0.0075	0.9925	0	0	0	0	3	3.07E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215957737	15	50985307	T	C	-	-	-	-	-	-	29	0	0	17	3	17.64705882	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.69550173	0.69550173	1	0.0025	0.0375	0.96	0	0	0	0	3	8.07E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215957818	15	51982323	T	C	SCG3	CCDS10142.1	r.?	-	-	intronic	31	0	0	56	16	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0.0025	0.9975	0	0	0	0	3	5.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215958262	15	56303765	T	C	-	-	-	-	-	-	35	0	0	62	9	14.51612903	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.572106262	0.572106262	1	0.00625	0.1275	0.86625	0	0	0	0	3	3.12E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215958366	15	57233922	G	C	TCF12	CCDS10159.1	r.?	-	-	intronic	22	0	0	55	28	50.90909091	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.515508021	0.838502674	3	0	0.00375	0.99625	0	0	0	0	3	1.25E-49	1	1	1	NA	NA	NA
1353824	PD9772b	1215958449	15	57757851	A	C	CGNL1	CCDS10161.1	r.?	-	-	intronic	34	0	0	80	34	42.5	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.1	1.05	2	0	0	1	0	0	0	0	3	2.05E-56	1	1	1	NA	NA	NA
1353824	PD9772b	1215958885	15	61383582	T	C	RORA	CCDS10177.1	r.?	-	-	intronic	32	0	0	39	6	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0.0025	0.025	0.9725	0	0	0	0	3	4.43E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215959076	15	62630387	G	C	-	-	-	-	-	-	27	0	0	76	21	27.63157895	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.365325077	1.365325077	1	0	0	1	0	0	0	0	3	1.07E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215959129	15	62917482	G	C	-	-	-	-	-	-	28	0	0	52	10	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0.00375	0.99625	0	0	0	0	3	1.28E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215959316	15	64246936	T	C	DAPK2	CCDS10188.1	r.?	-	-	intronic	42	0	0	86	24	27.90697674	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.378932969	1.378932969	1	0	0	1	0	0	0	0	3	5.49E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215959457	15	65064262	T	C	RBPMS2	CCDS32271.1	r.?	-	-	intronic	30	0	0	68	16	23.52941176	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0	1	0	0	0	0	3	1.75E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215960022	15	69280342	A	C	NOX5	CCDS32276.1	r.?	-	-	intronic	29	0	0	72	18	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215960534	15	73293451	A	C	-	-	-	-	-	-	43	0	0	94	15	15.95744681	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.788485607	0.788485607	1	0	0.00625	0.99375	0	0	0	0	3	1.96E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215960665	15	74642270	G	C	CYP11A1	CCDS45303.1	r.?	-	-	intronic	40	0	0	80	18	22.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.111764706	1.111764706	1	0	0.00125	0.99875	0	0	0	0	3	1.01E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215960770	15	75774966	G	C	PTPN9	CCDS10280.1	r.?	-	-	intronic	28	0	0	24	3	12.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.492647059	0.492647059	1	0.01	0.0975	0.8925	0	0	0	0	3	0.000233853	1	1	1	NA	NA	NA
1353824	PD9772b	1215960930	15	77596470	T	C	-	-	-	-	-	-	39	0	0	70	22	31.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.238655462	1.238655462	1	0	0	1	0	0	0	0	3	1.63E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215960932	15	77609807	G	C	-	-	-	-	-	-	44	0	0	59	4	6.779661017	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.267198405	0.267198405	1	0.30375	0.58125	0.115	0	0	0	0	2	0.00022841	1	1	1	NA	NA	NA
1353824	PD9772b	1215961156	15	79947115	A	C	-	-	-	-	-	-	41	0	0	67	20	29.85074627	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.176470588	1.176470588	1	0	0	1	0	0	0	0	3	4.42E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215961316	15	81590668	T	C	IL16	CCDS42069.1	r.?	-	-	intronic	29	0	0	36	13	36.11111111	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.423202614	1.423202614	1	0	0	1	0	0	0	0	3	2.53E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215961553	15	84633160	G	C	ADAMTSL3	CCDS10326.1	r.?	-	-	intronic	32	0	0	65	20	30.76923077	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.212669683	1.212669683	1	0	0	1	0	0	0	0	3	2.18E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215961721	15	86405434	T	C	-	-	-	-	-	-	35	0	0	56	17	30.35714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.196428571	1.196428571	1	0	0	1	0	0	0	0	3	6.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215962460	15	93901132	T	C	-	-	-	-	-	-	44	0	0	63	15	23.80952381	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.93837535	0.93837535	1	0	0	1	0	0	0	0	3	2.97E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215962589	15	94938726	T	C	MCTP2	CCDS32338.1	r.?	-	-	intronic	35	0	0	64	19	29.6875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.170036765	1.170036765	1	0	0	1	0	0	0	0	3	1.34E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215962954	15	98286568	T	C	AC027708.1	ENST00000503768	r.916a>g	-	-	non-coding variant	45	0	0	48	10	20.83333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.821078431	0.821078431	1	0.00125	0.0125	0.98625	0	0	0	0	3	5.37E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215963177	15	99715298	G	C	TTC23	CCDS10379.2	r.1656c>g	c.822C>G	p.I274M	missense	31	0	0	41	13	31.70731707	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.566714491	1.566714491	1	0	0	0.99875	0	0	0.00125	0	3	1.89E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215963250	15	100355046	T	C	-	-	-	-	-	-	32	0	0	76	14	18.42105263	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.910216718	0.910216718	1	0	0.0075	0.9925	0	0	0	0	3	3.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215963391	15	101165000	A	C	ASB7	CCDS10387.1	r.?	-	-	intronic	42	0	0	99	15	15.15151515	0	0	NA	0	0	NA							3.206976683	2	1	0.793023317	2	2	0.206976683	unphased	0.628508054	0.628508054	1	0	0.10375	0.89625	0	0	0	0	3	4.43E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215963564	15	102372985	A	C	-	-	-	-	-	-	34	0	0	96	26	27.08333333	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.796568627	0.796568627	1	0	0.00875	0.99125	0	0	0	0	3	2.18E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1215963805	16	3173831	G	C	ZNF205	CCDS10494.2	r.?	-	-	downstream	22	0	0	11	8	72.72727273	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	1.519012426	1.519012426	1	0	0	1	0	0	0	0	3	6.36E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215963930	16	4396422	A	C	ENSG00000217930	CCDS10512.1	r.?	-	-	intronic	40	0	0	37	14	37.83783784	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.790297005	0.790297005	1	0	0.00625	0.99375	0	0	0	0	3	3.35E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215964086	16	5609292	T	C	-	-	-	-	-	-	45	0	0	62	30	48.38709677	2	0	0	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	1.010633267	1.010633267	1	0	0	1	0	0	0	0	3	3.60E-52	1	1	1	NA	NA	NA
1353824	PD9772b	1215964492	16	8079537	G	C	-	-	-	-	-	-	53	0	0	90	34	37.77777778	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.789042566	0.789042566	1	0	0.00125	0.99875	0	0	0	0	3	3.14E-54	1	1	1	NA	NA	NA
1353824	PD9772b	1215964553	16	8522322	G	C	-	-	-	-	-	-	36	0	0	69	19	27.53623188	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.575133328	0.575133328	1	0.00375	0.52125	0.475	0	0	0	0	2	6.95E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215964777	16	9687781	T	C	-	-	-	-	-	-	32	0	0	80	29	36.25	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.757132756	0.757132756	1	0	0.00875	0.99125	0	0	0	0	3	7.59E-46	1	1	1	NA	NA	NA
1353824	PD9772b	1215964913	16	10524186	G	C	ATF7IP2	CCDS10540.1	r.?	-	-	intronic	38	0	0	57	22	38.59649123	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.806142559	0.806142559	1	0	0.00375	0.99625	0	0	0	0	3	7.03E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215965099	16	11913740	A	C	BCAR4	ENST00000505806	r.1261u>g	-	-	non-coding variant	30	0	0	55	19	34.54545455	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.706951872	0.853475936	2	0	0.00375	0.99625	0	0	0	0	3	4.51E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215965283	16	13182922	A	C	SHISA9	CCDS45417.1	r.?	-	-	intronic	26	0	0	101	18	17.82178218	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.880605708	0.880605708	1	0	0.0025	0.9975	0	0	0	0	3	9.60E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215965612	16	15560418	T	C	C16orf45	CCDS10561.1	r.?	-	-	intronic	36	0	0	70	35	50	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.470588235	0.823529412	3	0	0.00125	0.99875	0	0	0	0	3	2.75E-61	1	1	1	NA	NA	NA
1353824	PD9772b	1215966427	16	21071000	G	C	DNAH3	CCDS10594.1	r.?	-	-	intronic	37	0	0	55	15	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0.00125	0.99875	0	0	0	0	3	3.01E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215966802	16	24488874	A	C	-	-	-	-	-	-	33	0	0	50	6	12	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.472941176	0.472941176	1	0.0125	0.25375	0.73375	0	0	0	0	3	2.06E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215966859	16	25182639	G	C	LCMT1	CCDS45445.1	r.?	-	-	intronic	27	0	0	38	10	26.31578947	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.037151703	1.037151703	1	0	0	1	0	0	0	0	3	4.06E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215967169	16	28485531	T	C	CLN3	CCDS10632.1	r.?	-	-	downstream	35	0	0	29	5	17.24137931	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	3.36E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215976009	16	51982386	A	C	-	-	-	-	-	-	45	0	0	68	20	29.41176471	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.15916955	1.15916955	1	0	0	1	0	0	0	0	3	6.23E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215976462	16	56533598	T	C	BBS2	CCDS32451.1	r.?	-	-	intronic	34	0	0	70	17	24.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.957142857	0.957142857	1	0	0.0025	0.9975	0	0	0	0	3	4.68E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215976528	16	57218233	G	C	RSPRY1	CCDS10775.1	r.?	-	-	upstream	43	0	0	69	17	24.63768116	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.971014493	0.971014493	1	0	0.00125	0.99875	0	0	0	0	3	3.56E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215977168	16	63910176	A	C	-	-	-	-	-	-	32	0	0	48	12	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	1.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215977224	16	64395037	G	C	-	-	-	-	-	-	39	0	0	60	14	23.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.919607843	0.919607843	1	0	0	1	0	0	0	0	3	8.54E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215977237	16	64499604	A	C	-	-	-	-	-	-	41	0	0	66	17	25.75757576	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.015151515	1.015151515	1	0	0	1	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215977436	16	66738158	G	C	-	-	-	-	-	-	39	0	0	44	7	15.90909091	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.627005348	0.627005348	1	0.0025	0.065	0.9325	0	0	0	0	3	2.55E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215977730	16	70049939	G	C	PDXDC2	ENST00000334913	r.?	-	-	intronic	23	0	0	43	11	25.58139535	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.264021888	1.264021888	1	0	0.00125	0.99875	0	0	0	0	3	2.42E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215977974	16	71618173	T	C	-	-	-	-	-	-	49	0	0	82	20	24.3902439	309	0	0	185	33	17.83783784							4	2	2	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0	1	0	0	0	0	3	4.40E-28	1	2.01E-40	1	YES	somatic	1_1
1353824	PD9772b	1215978065	16	72321938	T	C	-	-	-	-	-	-	41	0	0	89	14	15.73033708	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.777263714	0.777263714	1	0	0.0075	0.9925	0	0	0	0	3	3.28E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215978499	16	75244359	A	C	CTRB2	CCDS32489.1	r.?	-	-	upstream	30	0	0	21	7	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	1.647058824	1	0	0.00375	0.995	0.00125	0	0	0	3	8.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215978548	16	75786652	G	C	-	-	-	-	-	-	45	0	0	67	16	23.88059701	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.179982441	1.179982441	1	0	0	1	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215978561	16	75917811	A	C	-	-	-	-	-	-	31	0	0	53	12	22.64150943	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.118756937	1.118756937	1	0	0.0025	0.9975	0	0	0	0	3	5.39E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215979269	16	81190070	T	C	PKD1L2	ENST00000299598	r.?	-	-	intronic	31	0	0	43	15	34.88372093	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.723666211	0.861833105	2	0	0.005	0.995	0	0	0	0	3	4.05E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215979335	16	81688110	G	C	ENSG00000153815	ENST00000398040	r.?	-	-	intronic	30	0	0	61	14	22.95081967	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.134040501	1.134040501	1	0	0	1	0	0	0	0	3	1.10E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215979436	16	82337759	T	C	-	-	-	-	-	-	29	0	0	88	19	21.59090909	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06684492	1.06684492	1	0	0	1	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215979444	16	82441840	T	C	-	-	-	-	-	-	29	0	0	82	14	17.07317073	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.843615495	0.843615495	1	0	0.0025	0.9975	0	0	0	0	3	9.77E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215979579	16	83325252	T	C	CDH13	ENST00000268613	r.?	-	-	intronic	45	0	0	72	11	15.27777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.754901961	0.754901961	1	0	0.0175	0.9825	0	0	0	0	3	1.12E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215979797	16	85174947	G	C	-	-	-	-	-	-	38	0	0	14	4	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0.0075	0.9925	0	0	0	0	3	6.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215980928	17	3216455	G	C	-	-	-	-	-	-	31	0	0	81	34	41.97530864	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.476012121	1.035947263	1.424794653	0	0	1	0	0	0	0	3	3.52E-56	1	1	1	NA	NA	NA
1353824	PD9772b	1215980930	17	3240145	T	C	-	-	-	-	-	-	33	0	0	76	32	42.10526316	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.480581818	1.03915453	1.424794653	0	0	1	0	0	0	0	3	5.07E-53	1	1	1	NA	NA	NA
1353824	PD9772b	1215981805	17	10246690	T	C	MYH13	CCDS45613.1	r.?	-	-	intronic	30	0	0	34	9	26.47058824	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.930806952	0.930806952	1	0	0.01	0.99	0	0	0	0	3	9.15E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215982086	17	12316833	G	C	-	-	-	-	-	-	31	0	0	44	5	11.36363636	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.399588843	0.694689027	0.575205347	0.00375	0.03375	0.9625	0	0	0	0	3	2.88E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215983022	17	17767848	T	C	TOM1L2	CCDS42270.1	r.?	-	-	intronic	34	0	0	15	7	46.66666667	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.640978181	1.640978181	1	0	0.00125	0.99875	0	0	0	0	3	4.85E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215983430	17	20775473	G	C	CCDC144NL	CCDS32591.1	r.?	-	-	intronic	50	0	0	118	18	15.25423729	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.536397226	0.932531711	0.575205347	0	0.00375	0.99625	0	0	0	0	3	1.86E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215985984	17	27980895	T	C	SSH2	CCDS11253.1	r.?	-	-	intronic	25	0	0	69	32	46.37681159	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.63078577	1.144576004	1.424794653	0	0	1	0	0	0	0	3	9.19E-55	1	1	1	NA	NA	NA
1353824	PD9772b	1215986152	17	29065230	G	C	AC127024.1	ENST00000499895	r.?	-	-	intronic	13	0	0	19	6	31.57894737	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.110436363	1.110436363	1	0	0.00375	0.99625	0	0	0	0	3	4.01E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215987838	17	47089547	A	C	IGF2BP1	CCDS11543.1	r.?	-	-	intronic	30	0	0	35	6	17.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.675630252	0.675630252	1	0.0025	0.04375	0.95375	0	0	0	0	3	2.24E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215987941	17	48569068	G	C	-	-	-	-	-	-	39	0	0	64	19	29.6875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.170036765	1.170036765	1	0	0	1	0	0	0	0	3	1.34E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215988136	17	50261925	T	C	-	-	-	-	-	-	32	0	0	54	15	27.77777778	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.094771242	1.094771242	1	0	0	1	0	0	0	0	3	2.20E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215988435	17	53091963	G	C	STXBP4	CCDS11584.2	r.?	-	-	intronic	33	0	0	51	21	41.17647059	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.62283737	0.811418685	2	0	0.0025	0.9975	0	0	0	0	3	4.73E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215989146	17	60543304	A	C	-	-	-	-	-	-	44	0	0	27	3	11.11111111	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.437908497	0.437908497	1	0.02	0.125	0.855	0	0	0	0	3	0.000334187	1	1	1	NA	NA	NA
1353824	PD9772b	1215989274	17	61880498	A	C	DDX42	CCDS32704.1	r.?	-	-	intronic	27	0	0	27	11	40.74074074	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.605664488	1.605664488	1	0	0	1	0	0	0	0	3	5.92E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215989686	17	65718536	G	C	NOL11	CCDS11671.1	r.?	-	-	intronic	32	0	0	68	16	23.52941176	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0	1	0	0	0	0	3	1.75E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215989883	17	66945447	G	C	ABCA8	CCDS11680.1	r.?	-	-	intronic	32	0	0	68	9	13.23529412	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.653979239	0.653979239	1	0	0.0775	0.9225	0	0	0	0	3	7.38E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215990166	17	68897048	A	C	-	-	-	-	-	-	29	0	0	77	35	45.45454545	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.245989305	1.122994652	2	0	0	1	0	0	0	0	3	2.37E-59	1	1	1	NA	NA	NA
1353824	PD9772b	1215990318	17	69644107	A	C	-	-	-	-	-	-	30	0	0	81	13	16.04938272	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.793028322	0.793028322	1	0	0.00875	0.99125	0	0	0	0	3	3.34E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215990390	17	70056537	T	C	-	-	-	-	-	-	27	0	0	106	54	50.94339623	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.988901221	0.988901221	1	0	0	1	0	0	0	0	3	2.65E-94	1	1	1	NA	NA	NA
1353824	PD9772b	1215990891	17	73148675	T	C	HN1	CCDS45772.1	r.?	-	-	intronic	26	0	0	84	9	10.71428571	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.207983193	0.207983193	1	0.88875	0.11125	0	0	0	0	0	1	5.13E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215990970	17	73477154	G	C	KIAA0195	CCDS32732.1	r.?	-	-	intronic	36	0	0	33	13	39.39393939	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.00875	0.99125	0	0	0	0	3	6.37E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215990973	17	73514338	A	C	CASKIN2	CCDS11723.1	r.?	-	-	upstream	30	0	0	75	15	20	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.388235294	0.388235294	1	0.1125	0.88375	0.00375	0	0	0	0	2	5.25E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215991043	17	74223598	T	C	RNF157	CCDS32740.1	r.?	-	-	intronic	38	0	0	26	10	38.46153846	0	0	NA	0	0	NA							0.675223744	0	0	0.324776256	1	0	0.675223744	unphased	0.62169239	0.62169239	1	0.005	0.1475	0.8475	0	0	0	0	3	4.82E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215991376	17	78177461	A	C	CARD14	CCDS11768.1	r.?	-	-	intronic	38	0	0	2	2	100	0	0	NA	0	0	NA							0.675223744	0	0	0.324776256	1	0	0.675223744	unphased	1.616400215	1.616400215	1	0	0.00625	0.99375	0	0	0	0	3	2.50E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215991503	17	79998987	T	C	DCXR	CCDS11799.1	r.?	-	-	upstream	30	0	0	47	12	25.53191489	0	0	NA	0	0	NA							0.675223744	0	0	0.324776256	1	0	0.675223744	unphased	0.412697927	0.412697927	1	0.07875	0.89875	0.0225	0	0	0	0	2	1.09E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215991551	17	80614887	T	C	RAB40B	CCDS11816.1	r.?	-	-	downstream	43	0	0	33	5	15.15151515	0	0	NA	0	0	NA							0.675223744	0	0	0.324776256	1	0	0.675223744	unphased	0.244909123	0.244909123	1	0.44875	0.5475	0.00375	0	0	0	0	2	6.60E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215991642	18	27528	A	C	-	-	-	-	-	-	41	0	0	43	12	27.90697674	8	0	0	13	1	7.692307692							4	2	2	1	NA	NA	NA	unphased	1.378932969	1.378932969	1	0	0	1	0	0	0	0	3	3.24E-18	1	0.063085307	1	NA	NA	NA
1353824	PD9772b	1215991830	18	548817	T	C	-	-	-	-	-	-	42	0	0	81	14	17.28395062	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.026870007	1.026870007	1	0	0.0025	0.9975	0	0	0	0	3	8.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215992235	18	2467988	G	C	-	-	-	-	-	-	30	0	0	84	24	28.57142857	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.697478992	0.848739496	2	0	0.0025	0.9975	0	0	0	0	3	2.87E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215992449	18	3546009	A	C	DLGAP1	CCDS11836.1	r.?	-	-	intronic	38	0	0	49	12	24.48979592	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.454981993	1.454981993	1	0	0	1	0	0	0	0	3	1.90E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215992811	18	6032536	T	C	L3MBTL4	CCDS11839.2	r.?	-	-	intronic	32	0	0	61	7	11.47540984	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.567020251	0.567020251	1	0.0075	0.12375	0.86875	0	0	0	0	3	2.69E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215992947	18	7018569	T	C	LAMA1	CCDS32787.1	r.?	-	-	intronic	23	0	0	15	4	26.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0	0.005	0.995	0	0	0	0	3	8.16E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215993457	18	11166688	G	C	-	-	-	-	-	-	36	0	0	70	21	30	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.482352941	0.741176471	2	0	0.01375	0.98625	0	0	0	0	3	1.45E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215993599	18	12222078	G	C	-	-	-	-	-	-	27	0	0	55	16	29.09090909	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.437433155	1.437433155	1	0	0	1	0	0	0	0	3	3.78E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215993625	18	12470139	T	C	SPIRE1	CCDS45829.1	r.?	-	-	intronic	26	0	0	65	9	13.84615385	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.684162896	0.684162896	1	0.00125	0.04375	0.955	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215994240	18	14575515	T	C	-	-	-	-	-	-	27	0	0	77	10	12.98701299	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.64171123	0.64171123	1	0.00125	0.05875	0.94	0	0	0	0	3	7.90E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215996188	18	21603511	G	C	TTC39C	CCDS45839.1	r.?	-	-	intronic	28	0	0	37	9	24.32432432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.20190779	1.20190779	1	0	0	1	0	0	0	0	3	2.14E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215996593	18	24150245	T	C	KCTD1	CCDS11888.1	r.?	-	-	intronic	27	0	0	83	8	9.638554217	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.572643515	0.572643515	1	0.01	0.10875	0.88125	0	0	0	0	3	1.10E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215996912	18	26123386	T	C	-	-	-	-	-	-	28	0	0	75	12	16	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.950588235	0.950588235	1	0	0.005	0.995	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215997298	18	28195409	G	C	-	-	-	-	-	-	28	0	0	96	15	15.625	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.928308824	0.928308824	1	0	0.00125	0.99875	0	0	0	0	3	2.73E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215997355	18	28642077	A	C	DSC2	CCDS11892.1	r.?	-	-	downstream	27	0	0	90	12	13.33333333	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.792156863	0.792156863	1	0	0.01125	0.98875	0	0	0	0	3	4.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215997783	18	31149130	T	C	-	-	-	-	-	-	30	0	0	66	9	13.63636364	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.810160428	0.810160428	1	0	0.015	0.985	0	0	0	0	3	5.59E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215997789	18	31200711	T	C	ASXL3	CCDS45847.1	r.?	-	-	intronic	29	0	0	97	11	11.34020619	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.673741662	0.673741662	1	0	0.0375	0.9625	0	0	0	0	3	3.27E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215997829	18	31566084	A	C	NOL4	CCDS11907.2	r.?	-	-	intronic	44	0	0	92	14	15.2173913	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.904092072	0.904092072	1	0	0.005	0.995	0	0	0	0	3	5.34E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215998215	18	34105528	G	C	FHOD3	CCDS32816.1	r.?	-	-	intronic	36	0	0	107	17	15.88785047	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.943925234	0.943925234	1	0	0.0025	0.9975	0	0	0	0	3	1.16E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215998306	18	34758253	G	C	KIAA1328	CCDS45855.1	r.?	-	-	intronic	45	0	0	112	19	16.96428571	0	0	NA	2	0	0							5	3	2	1	NA	NA	NA	unphased	1.007878151	1.007878151	1	0	0	1	0	0	0	0	3	1.72E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215998547	18	36344418	A	C	-	-	-	-	-	-	39	0	0	87	5	5.747126437	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.341446924	0.341446924	1	0.14375	0.51125	0.345	0	0	0	0	2	8.21E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215998654	18	36952485	T	C	AC105201.1	ENST00000510201	r.?	-	-	intronic	35	0	0	98	14	14.28571429	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.848739496	0.848739496	1	0	0.00375	0.99625	0	0	0	0	3	1.34E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215998680	18	37069877	A	C	AC105201.1	ENST00000510201	r.?	-	-	intronic	37	0	0	111	14	12.61261261	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.749337573	0.749337573	1	0	0.0175	0.9825	0	0	0	0	3	8.15E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215998963	18	38753194	T	C	-	-	-	-	-	-	44	0	0	48	9	18.75	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.113970588	1.113970588	1	0	0.00125	0.99875	0	0	0	0	3	2.75E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215999112	18	39712497	G	C	-	-	-	-	-	-	45	0	0	91	16	17.58241758	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.044602456	1.044602456	1	0	0	1	0	0	0	0	3	2.79E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215999220	18	40340837	T	C	RIT2	CCDS11921.1	r.?	-	-	intronic	28	0	0	66	14	21.21212121	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.260249554	1.260249554	1	0	0	1	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215999457	18	41677371	G	C	-	-	-	-	-	-	37	0	0	96	15	15.625	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.928308824	0.928308824	1	0	0.0025	0.9975	0	0	0	0	3	2.73E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215999550	18	42275542	G	C	SETBP1	CCDS11923.2	r.?	-	-	intronic	45	0	0	97	15	15.46391753	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.918738629	0.918738629	1	0	0	1	0	0	0	0	3	3.21E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215999593	18	42614450	A	C	SETBP1	CCDS11923.2	r.?	-	-	intronic	33	0	0	89	14	15.73033708	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.934567085	0.934567085	1	0	0.0075	0.9925	0	0	0	0	3	3.28E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215999648	18	42931499	T	C	-	-	-	-	-	-	25	0	0	61	10	16.39344262	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.973963356	0.973963356	1	0.00125	0.00375	0.995	0	0	0	0	3	6.98E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216000047	18	45391397	T	C	SMAD2	CCDS11934.1	r.?	-	-	intronic	30	0	0	89	18	20.2247191	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.201586252	1.201586252	1	0	0	1	0	0	0	0	3	8.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216000050	18	45398731	G	C	SMAD2	CCDS11934.1	r.?	-	-	intronic	36	0	0	112	19	16.96428571	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.007878151	1.007878151	1	0	0	1	0	0	0	0	3	1.72E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216000266	18	46750072	G	C	DYM	CCDS11937.1	r.?	-	-	intronic	42	0	0	104	33	31.73076923	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.885180995	0.942590498	2	0	0.00125	0.99875	0	0	0	0	3	1.15E-49	1	1	1	NA	NA	NA
1353824	PD9772b	1216000422	18	47659446	G	C	MYO5B	CCDS42436.1	r.?	-	-	intronic	32	0	0	108	21	19.44444444	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.155228758	1.155228758	1	0	0.00125	0.99875	0	0	0	0	3	3.87E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216000541	18	48324217	T	C	MRO	CCDS45868.1	r.2428a>g	c.?	p.?	3'UTR variant	36	0	0	89	17	19.1011236	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.134831461	1.134831461	1	0	0	1	0	0	0	0	3	4.11E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216000551	18	48348061	T	C	MRO	CCDS11947.1	r.?	-	-	upstream	44	0	0	88	13	14.77272727	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.877673797	0.877673797	1	0	0.005	0.995	0	0	0	0	3	1.03E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216000881	18	50393747	G	C	DCC	CCDS11952.1	r.?	-	-	intronic	36	0	0	99	16	16.16161616	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.960190137	0.960190137	1	0	0	1	0	0	0	0	3	1.17E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216000914	18	50606915	T	C	DCC	CCDS11952.1	r.?	-	-	intronic	41	0	0	121	14	11.57024793	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.687408848	0.687408848	1	0	0.03875	0.96125	0	0	0	0	3	2.80E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216001188	18	52215510	G	C	-	-	-	-	-	-	44	0	0	96	13	13.54166667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.804534314	0.804534314	1	0	0.01	0.99	0	0	0	0	3	3.35E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216001272	18	52641913	G	C	-	-	-	-	-	-	38	0	0	115	22	19.13043478	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.13657289	1.13657289	1	0	0	1	0	0	0	0	3	3.43E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216001320	18	53052775	G	C	TCF4	CCDS42438.1	r.?	-	-	intronic	33	0	0	63	4	6.349206349	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.377217554	0.377217554	1	0.0625	0.26875	0.66875	0	0	0	0	3	0.000294233	1	1	1	NA	NA	NA
1353824	PD9772b	1216001716	18	55854456	G	C	NEDD4L	CCDS45872.1	r.?	-	-	intronic	43	0	0	62	23	37.09677419	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.833017078	0.916508539	2	0	0	1	0	0	0	0	3	5.90E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216002012	18	58004762	G	C	-	-	-	-	-	-	33	0	0	62	9	14.51612903	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.717267552	0.717267552	1	0	0.0275	0.9725	0	0	0	0	3	3.12E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216002018	18	58094529	G	C	-	-	-	-	-	-	27	0	0	89	23	25.84269663	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.276933245	1.276933245	1	0	0	1	0	0	0	0	3	1.02E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216002077	18	58441432	A	C	-	-	-	-	-	-	48	0	0	58	23	39.65517241	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.959432049	0.979716024	2	0	0	1	0	0	0	0	3	8.87E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1216002266	18	59883019	T	C	KIAA1468	CCDS11979.2	r.?	-	-	intronic	29	0	0	73	7	9.589041096	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.473811442	0.473811442	1	0.02125	0.27875	0.7	0	0	0	0	3	9.54E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216002344	18	60421425	T	C	PHLPP1	CCDS45881.1	r.?	-	-	intronic	35	0	0	83	18	21.68674699	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.071580439	1.071580439	1	0	0	1	0	0	0	0	3	2.09E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216002553	18	61504254	G	C	-	-	-	-	-	-	34	0	0	59	11	18.6440678	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.921236291	0.921236291	1	0	0.00375	0.99625	0	0	0	0	3	1.10E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216002802	18	63066831	A	C	-	-	-	-	-	-	25	0	0	111	13	11.71171171	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.695813461	0.695813461	1	0.00125	0.03125	0.9675	0	0	0	0	3	2.32E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216003137	18	64793381	T	C	-	-	-	-	-	-	43	0	0	99	10	10.1010101	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.600118835	0.600118835	1	0	0.105	0.895	0	0	0	0	3	1.01E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216003610	18	67164913	G	C	DOK6	CCDS32841.1	r.?	-	-	intronic	32	0	0	76	9	11.84210526	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.585139319	0.585139319	1	0.00375	0.10875	0.8875	0	0	0	0	3	2.06E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216003867	18	68935148	T	C	-	-	-	-	-	-	46	0	0	88	15	17.04545455	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.842245989	0.842245989	1	0	0.005	0.995	0	0	0	0	3	6.87E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216004128	18	70617496	G	C	-	-	-	-	-	-	34	0	0	72	12	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.00625	0.99375	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216004364	18	72526480	T	C	ZNF407	CCDS45885.1	r.?	-	-	intronic	35	0	0	84	21	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.15E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216004483	18	73572161	G	C	-	-	-	-	-	-	34	0	0	51	10	19.60784314	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.968858131	0.968858131	1	0	0.00125	0.99875	0	0	0	0	3	1.04E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216004726	18	75318295	T	C	-	-	-	-	-	-	35	0	0	40	8	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.005	0.995	0	0	0	0	3	2.61E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216005623	19	5506662	G	C	-	-	-	-	-	-	31	0	0	23	9	39.13043478	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	1.123077474	1.123077474	1	0	0.005	0.995	0	0	0	0	3	1.50E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216005745	19	6616826	G	C	-	-	-	-	-	-	23	0	0	40	11	27.5	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.789273892	0.849677089	0.928910409	0	0.0075	0.9925	0	0	0	0	3	9.88E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216005754	19	6655472	T	C	-	-	-	-	-	-	24	0	0	34	5	14.70588235	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.4220716	0.4220716	1	0.04625	0.35	0.60375	0	0	0	0	3	7.71E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216005988	19	8763989	A	C	-	-	-	-	-	-	29	0	0	15	4	26.66666667	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.765356501	0.765356501	1	0	0.0275	0.9725	0	0	0	0	3	8.16E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216006333	19	11448742	T	C	RAB3D	CCDS12257.1	r.?	-	-	intronic	35	0	0	34	7	20.58823529	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.59090024	0.636121885	0.928910409	0.0025	0.06	0.9375	0	0	0	0	3	3.73E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216006567	19	13090765	G	C	-	-	-	-	-	-	37	0	0	38	5	13.15789474	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.37764301	0.37764301	1	0.09375	0.5075	0.39875	0	0	0	0	2	1.37E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216006672	19	14362114	G	C	-	-	-	-	-	-	26	0	0	28	4	14.28571429	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.410012411	0.441390695	0.928910409	0.035	0.2025	0.7625	0	0	0	0	3	1.16E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216006796	19	15148670	T	C	-	-	-	-	-	-	36	0	0	78	20	25.64102564	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.735919713	0.79223971	0.928910409	0	0.0075	0.9925	0	0	0	0	3	1.43E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216006998	19	16264985	G	C	HSH2D	ENST00000397372	r.?	-	-	intronic	24	0	0	19	4	21.05263158	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.604228817	0.650470499	0.928910409	0.0025	0.05	0.9475	0	0	0	0	3	2.28E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216007065	19	16853438	G	C	NWD1	CCDS32945.1	r.?	-	-	intronic	30	0	0	54	9	16.66666667	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.478347813	0.478347813	1	0.03375	0.4925	0.47375	0	0	0	0	2	8.48E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216007222	19	18494035	A	C	PGPEP1	CCDS12375.1	r.?	-	-	intronic	25	0	0	11	5	45.45454545	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	1.304584945	1.304584945	1	0	0.005	0.995	0	0	0	0	3	1.41E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216007276	19	19149837	T	C	ARMC6	CCDS32965.1	r.?	-	-	intronic	30	0	0	47	18	38.29787234	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	1.099182209	1.099182209	1	0	0	1	0	0	0	0	3	1.52E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216009002	19	28735105	G	C	-	-	-	-	-	-	34	0	0	70	12	17.14285714	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.504201681	0.504201681	1	0.0225	0.5575	0.42	0	0	0	0	2	1.99E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216010397	19	39116367	G	C	EIF3K	CCDS12517.1	r.?	-	-	intronic	25	0	0	23	4	17.39130435	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.511508951	0.511508951	1	0.01375	0.10625	0.88	0	0	0	0	3	5.13E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216010623	19	40979996	T	C	SPTBN4	CCDS12559.1	r.?	-	-	intronic	26	0	0	55	10	18.18181818	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.534759358	0.534759358	1	0.0075	0.3275	0.665	0	0	0	0	3	2.33E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216011295	19	45356272	G	C	PVRL2	CCDS42576.1	r.?	-	-	intronic	38	0	0	41	7	17.07317073	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.50215208	0.50215208	1	0.025	0.25625	0.71875	0	0	0	0	3	1.51E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216011604	19	48156028	A	C	GLTSCR1	CCDS46134.1	r.?	-	-	intronic	41	0	0	56	4	7.142857143	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.210084034	0.210084034	1	0.51	0.48125	0.00875	0	0	0	0	1	0.000186538	1	1	1	NA	NA	NA
1353824	PD9772b	1216011846	19	50581356	T	C	-	-	-	-	-	-	51	0	0	37	4	10.81081081	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.317965024	0.317965024	1	0.16375	0.56375	0.2725	0	0	0	0	2	3.62E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216012157	19	52524912	T	C	ZNF614	CCDS12847.1	r.?	-	-	intronic	28	0	0	113	35	30.97345133	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	1.086271981	1.086271981	1	0	0	1	0	0	0	0	3	3.79E-52	1	1	1	NA	NA	NA
1353824	PD9772b	1216012634	19	54899783	G	C	-	-	-	-	-	-	31	0	0	16	5	31.25	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	1.095970838	1.095970838	1	0	0.0075	0.9925	0	0	0	0	3	1.30E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216012956	19	55504155	G	C	NLRP2	CCDS12913.1	r.?	-	-	intronic	26	0	0	51	19	37.25490196	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	1.306569156	1.306569156	1	0	0	1	0	0	0	0	3	7.94E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216013302	19	57485431	T	C	-	-	-	-	-	-	30	0	0	46	6	13.04347826	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.457448698	0.808312913	0.565930212	0	0.02125	0.97875	0	0	0	0	3	1.23E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216013338	19	57646741	G	C	ZIM3	CCDS33125.1	r.1350c>g	c.964C>G	p.L322V	missense	38	0	0	89	18	20.2247191	0	0	NA	2	0	0							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.709302475	1.253339123	0.565930212	0	0	1	0	0	0	0	3	8.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216013425	19	58111241	A	C	ZNF530	CCDS12955.1	r.?	-	-	upstream	34	0	0	9	4	44.44444444	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	1.558714081	1.558714081	1	0	0.00375	0.99625	0	0	0	0	3	7.72E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216013687	2	737110	T	C	-	-	-	-	-	-	38	0	0	67	15	22.3880597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.106233538	1.106233538	1	0	0	1	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216013705	2	842285	A	C	-	-	-	-	-	-	49	0	0	22	3	13.63636364	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.673796791	0.673796791	1	0.00375	0.04375	0.9525	0	0	0	0	3	0.000179267	1	1	1	NA	NA	NA
1353824	PD9772b	1216014214	2	4586142	G	C	ENSG00000228584	ENST00000446457	r.?	-	-	intronic	26	0	0	78	17	21.79487179	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.076923077	1.076923077	1	0	0	1	0	0	0	0	3	3.59E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216014335	2	5651845	T	C	-	-	-	-	-	-	34	0	0	75	22	29.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.449411765	0.724705882	2	0	0.03375	0.96625	0	0	0	0	3	9.55E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216014524	2	6939022	G	C	-	-	-	-	-	-	45	0	0	89	13	14.60674157	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.721744878	0.721744878	1	0.00125	0.02625	0.9725	0	0	0	0	3	1.21E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216014692	2	8170640	A	C	-	-	-	-	-	-	39	0	0	79	16	20.25316456	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.000744602	1.000744602	1	0	0	1	0	0	0	0	3	2.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216014744	2	8609398	A	C	-	-	-	-	-	-	36	0	0	80	21	26.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.297058824	1.297058824	1	0	0	1	0	0	0	0	3	3.63E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216015135	2	11942463	G	C	LPIN1	CCDS1682.1	r.?	-	-	intronic	38	0	0	75	18	24	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.185882353	1.185882353	1	0	0	1	0	0	0	0	3	2.78E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216015363	2	13586415	T	C	-	-	-	-	-	-	38	0	0	77	12	15.58441558	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.770053476	0.770053476	1	0	0.025	0.975	0	0	0	0	3	6.64E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216015481	2	14426373	G	C	-	-	-	-	-	-	38	0	0	51	9	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.00375	0.99625	0	0	0	0	3	4.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216015492	2	14492394	T	C	-	-	-	-	-	-	32	0	0	87	19	21.83908046	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.079107505	1.079107505	1	0	0	1	0	0	0	0	3	9.64E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216016073	2	19241382	A	C	-	-	-	-	-	-	30	0	0	77	8	10.38961039	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.513368984	0.513368984	1	0.015	0.22125	0.76375	0	0	0	0	3	6.05E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216016103	2	19404624	T	C	-	-	-	-	-	-	42	0	0	75	22	29.33333333	244	0	0	68	7	10.29411765							4	2	2	1	NA	NA	NA	unphased	1.449411765	0.724705882	2	0	0.025	0.975	0	0	0	0	3	9.55E-33	1	5.80E-08	1	YES	somatic	1_1
1353824	PD9772b	1216016183	2	20124749	T	C	WDR35	CCDS33152.1	r.?	-	-	intronic	29	0	0	46	12	26.08695652	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.289002558	1.289002558	1	0	0	1	0	0	0	0	3	8.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216016199	2	20190233	A	C	WDR35	CCDS33152.1	r.?	-	-	upstream	34	0	0	45	6	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0.00125	0.0575	0.94125	0	0	0	0	3	1.08E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216016239	2	20552506	G	C	PUM2	CCDS1698.1	r.?	-	-	upstream	33	0	0	72	13	18.05555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.892156863	0.892156863	1	0	0.0025	0.9975	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216016285	2	21054450	G	C	-	-	-	-	-	-	41	0	0	74	17	22.97297297	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.135135135	1.135135135	1	0	0.00125	0.99875	0	0	0	0	3	1.34E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216016457	2	22578889	G	C	-	-	-	-	-	-	36	0	0	93	23	24.7311828	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.222011385	1.222011385	1	0	0	1	0	0	0	0	3	3.18E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216016531	2	23239415	T	C	-	-	-	-	-	-	39	0	0	78	19	24.35897436	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.20361991	1.20361991	1	0	0	1	0	0	0	0	3	9.67E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216016726	2	24989886	G	C	NCOA1	CCDS1713.1	r.?	-	-	intronic	25	0	0	69	5	7.246376812	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.358056266	0.358056266	1	0.10875	0.49125	0.4	0	0	0	0	2	2.69E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216016792	2	25713502	G	C	DTNB	CCDS46237.1	r.?	-	-	intronic	38	0	0	71	15	21.12676056	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.043910522	1.043910522	1	0	0.00125	0.99875	0	0	0	0	3	2.15E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216016883	2	26443471	G	C	HADHA	CCDS1721.1	r.?	-	-	intronic	41	0	0	64	10	15.625	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.772058824	0.772058824	1	0	0.0225	0.9775	0	0	0	0	3	1.16E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216016965	2	27088468	A	C	DPYSL5	CCDS1730.1	r.?	-	-	intronic	51	0	0	38	10	26.31578947	0	0	NA	0	0	NA							2.600886584	1	1	0.399113416	2	1	0.600886584	unphased	0.932121856	0.932121856	1	0	0.00625	0.99375	0	0	0	0	3	4.06E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216016966	2	27094908	T	C	DPYSL5	CCDS1730.1	r.?	-	-	intronic	42	0	0	48	7	14.58333333	0	0	NA	0	0	NA							2.600886584	1	1	0.399113416	2	1	0.600886584	unphased	0.516550862	0.859647853	0.600886584	0	0.01875	0.98125	0	0	0	0	3	4.81E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216017084	2	27759275	T	C	ENSG00000233438	ENST00000447166	r.?	-	-	upstream	40	0	0	67	21	31.34328358	0	0	NA	0	0	NA							2.600886584	1	1	0.399113416	2	1	0.600886584	unphased	1.110198868	1.110198868	1	0	0	1	0	0	0	0	3	4.96E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216017096	2	27823497	T	C	ZNF512	CCDS1758.1	r.?	-	-	intronic	22	0	0	103	18	17.47572816	0	0	NA	0	0	NA							2.600886584	1	1	0.399113416	2	1	0.600886584	unphased	0.619001311	1.030146665	0.600886584	0	0.00125	0.99875	0	0	0	0	3	1.40E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216017112	2	27970421	G	C	-	-	-	-	-	-	40	0	0	67	18	26.86567164	0	0	NA	0	0	NA							2.600886584	1	1	0.399113416	2	1	0.600886584	unphased	0.95159903	0.95159903	1	0	0	1	0	0	0	0	3	2.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216017164	2	28270982	A	C	BRE	CCDS1764.1	r.?	-	-	intronic	35	0	0	65	12	18.46153846	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.912217195	0.912217195	1	0	0.0025	0.9975	0	0	0	0	3	7.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216017179	2	28393558	G	C	BRE	CCDS1764.1	r.?	-	-	intronic	36	0	0	78	11	14.1025641	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.696832579	0.696832579	1	0.00125	0.0325	0.96625	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216017216	2	28598765	T	C	-	-	-	-	-	-	33	0	0	36	10	27.77777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.37254902	1.37254902	1	0	0	1	0	0	0	0	3	2.21E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216018350	2	37839724	T	C	-	-	-	-	-	-	30	0	0	78	14	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.00375	0.99625	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216018527	2	38662555	A	C	-	-	-	-	-	-	41	0	0	41	10	24.3902439	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0.00375	0.99625	0	0	0	0	3	9.51E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216018784	2	40570592	T	C	SLC8A1	CCDS1806.1	r.?	-	-	intronic	31	0	0	78	12	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.01625	0.98375	0	0	0	0	3	7.82E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216018910	2	41603968	G	C	-	-	-	-	-	-	39	0	0	77	19	24.67532468	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.219251337	1.219251337	1	0	0	1	0	0	0	0	3	7.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216019082	2	42896749	T	C	MTA3	CCDS46267.1	r.?	-	-	intronic	23	0	0	77	27	35.06493506	0	0	NA	0	0	NA							2.646010347	1	1	0.353989653	2	1	0.646010347	unphased	1.257844728	1.257844728	1	0	0	1	0	0	0	0	3	2.57E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1216019235	2	43994584	G	C	PLEKHH2	CCDS1812.1	r.6439g>c	c.?	p.?	3'UTR variant	42	0	0	70	16	22.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.129411765	1.129411765	1	0	0	1	0	0	0	0	3	2.93E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216019256	2	44136192	G	C	LRPPRC	CCDS33189.1	r.?	-	-	intronic	31	0	0	60	7	11.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.576470588	0.576470588	1	0.005	0.1	0.895	0	0	0	0	3	2.39E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216019296	2	44344672	A	C	-	-	-	-	-	-	45	0	0	44	8	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.01	0.99	0	0	0	0	3	5.90E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216019656	2	47398840	T	C	CALM2	CCDS1832.1	r.?	-	-	intronic	54	0	0	62	10	16.12903226	201	0	0	101	10	9.900990099							4	2	2	1	NA	NA	NA	unphased	0.796963947	0.796963947	1	0	0.02125	0.97875	0	0	0	0	3	8.29E-13	1	1.24E-10	1	YES	somatic	1_1
1353824	PD9772b	1216019697	2	47615346	G	C	EPCAM	CCDS1833.1	r.?	-	-	downstream	43	0	0	35	8	22.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.129411765	1.129411765	1	0	0.00125	0.99875	0	0	0	0	3	8.15E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216019816	2	48537778	T	C	FOXN2	CCDS1838.1	r.?	-	-	upstream	27	0	0	79	7	8.860759494	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.437825763	0.437825763	1	0.0475	0.38625	0.56625	0	0	0	0	3	1.65E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216020225	2	52315596	A	C	-	-	-	-	-	-	47	0	0	102	23	22.54901961	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.114186851	1.114186851	1	0	0	1	0	0	0	0	3	3.39E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216020261	2	52490926	G	C	-	-	-	-	-	-	32	0	0	70	14	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0	1	0	0	0	0	3	9.08E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216020572	2	55077042	A	C	EML6	CCDS46286.1	r.?	-	-	intronic	38	0	0	58	16	27.5862069	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.363083164	1.363083164	1	0	0	1	0	0	0	0	3	1.00E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216020671	2	55727269	A	C	-	-	-	-	-	-	45	0	0	82	24	29.26829268	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.446197991	0.723098996	2	0	0.02125	0.97875	0	0	0	0	3	1.47E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216020760	2	56358017	G	C	-	-	-	-	-	-	40	0	0	77	13	16.88311688	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.834224599	0.834224599	1	0	0.00375	0.99625	0	0	0	0	3	1.67E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216020831	2	57196100	T	C	-	-	-	-	-	-	29	0	0	83	20	24.09638554	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.190644933	1.190644933	1	0	0	1	0	0	0	0	3	5.78E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216020965	2	58191289	T	C	-	-	-	-	-	-	27	0	0	80	13	16.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.802941176	0.802941176	1	0	0.00625	0.99375	0	0	0	0	3	2.82E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216021136	2	59496852	G	C	-	-	-	-	-	-	26	0	0	72	15	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.0025	0.9975	0	0	0	0	3	2.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216021824	2	64519009	A	C	-	-	-	-	-	-	32	0	0	72	10	13.88888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.68627451	0.68627451	1	0.00125	0.045	0.95375	0	0	0	0	3	3.95E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216021915	2	65310414	G	C	CEP68	CCDS1880.2	r.?	-	-	intronic	26	0	0	74	9	12.16216216	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.600953895	0.600953895	1	0.00625	0.08375	0.91	0	0	0	0	3	1.61E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216021931	2	65386222	T	C	-	-	-	-	-	-	34	0	0	53	10	18.86792453	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.932297447	0.932297447	1	0	0.005	0.995	0	0	0	0	3	1.57E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216022069	2	66392231	G	C	-	-	-	-	-	-	45	0	0	82	13	15.85365854	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.783357245	0.783357245	1	0	0.0175	0.9825	0	0	0	0	3	3.95E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216022430	2	68814805	G	C	PROKR1	CCDS1889.1	r.?	-	-	intronic	31	0	0	68	13	19.11764706	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.944636678	0.944636678	1	0	0.00625	0.99375	0	0	0	0	3	2.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216023557	2	77806889	A	C	LRRTM4	ENST00000456154	r.?	-	-	intronic	26	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0.00375	0.99625	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216023649	2	78569172	T	C	-	-	-	-	-	-	25	0	0	67	11	16.41791045	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	0.811237928	0.811237928	1	0	0.00875	0.99125	0	0	0	0	3	4.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216023669	2	78845704	A	C	-	-	-	-	-	-	34	0	0	52	11	21.15384615	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	1.045248869	1.045248869	1	0	0.00125	0.99875	0	0	0	0	3	2.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216023938	2	80908575	T	C	-	-	-	-	-	-	28	0	0	96	18	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0	1	0	0	0	0	3	3.60E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216024021	2	81716574	T	C	-	-	-	-	-	-	34	0	0	61	11	18.03278689	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.891031823	0.891031823	1	0	0.00875	0.99125	0	0	0	0	3	1.62E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216024084	2	82267710	T	C	-	-	-	-	-	-	26	0	0	73	17	23.28767123	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.150684932	1.150684932	1	0	0	1	0	0	0	0	3	1.03E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216024337	2	84123634	A	C	-	-	-	-	-	-	32	0	0	79	22	27.84810127	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.376023827	1.376023827	1	0	0	1	0	0	0	0	3	3.56E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216024371	2	84406483	T	C	-	-	-	-	-	-	40	0	0	72	12	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.0125	0.9875	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216024392	2	84566805	T	C	-	-	-	-	-	-	26	0	0	55	8	14.54545455	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.718716578	0.718716578	1	0.00125	0.02875	0.97	0	0	0	0	3	3.86E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216024501	2	85395278	A	C	TCF7L1	CCDS1971.1	r.?	-	-	intronic	25	0	0	37	10	27.02702703	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.3354531	1.3354531	1	0	0.00125	0.99875	0	0	0	0	3	3.01E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216024650	2	86619627	A	C	-	-	-	-	-	-	41	0	0	86	21	24.41860465	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.206566347	1.206566347	1	0	0.00125	0.99875	0	0	0	0	3	2.01E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216027181	2	92037156	G	C	-	-	-	-	-	-	55	0	0	45	7	15.55555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.768627451	0.768627451	1	0	0.015	0.985	0	0	0	0	3	3.00E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216027267	2	92061461	T	C	-	-	-	-	-	-	43	0	0	132	7	5.303030303	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.262032086	0.262032086	1	0.4475	0.545	0.0075	0	0	0	0	2	5.34E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216028830	2	96059710	G	C	-	-	-	-	-	-	36	0	0	75	17	22.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.12	1.12	1	0	0	1	0	0	0	0	3	1.72E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216029396	2	97878317	A	C	ANKRD36	ENST00000461153	r.?	-	-	intronic	47	0	0	116	20	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0	0.00125	0.99875	0	0	0	0	3	8.48E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216029609	2	99266214	G	C	MGAT4A	CCDS2036.1	r.?	-	-	intronic	27	0	0	71	11	15.49295775	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.765534383	0.765534383	1	0	0.015	0.985	0	0	0	0	3	9.49E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216029614	2	99305326	A	C	MGAT4A	CCDS2036.1	r.?	-	-	intronic	30	0	0	77	5	6.493506494	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.320855615	0.320855615	1	0.1525	0.625	0.2225	0	0	0	0	2	4.58E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216030089	2	103130760	G	C	SLC9A4	CCDS33264.1	r.?	-	-	intronic	38	0	0	82	20	24.3902439	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0	1	0	0	0	0	3	4.40E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216030108	2	103434525	A	C	TMEM182	CCDS2064.1	r.?	-	-	downstream	31	0	0	95	17	17.89473684	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.884210526	0.884210526	1	0	0.00125	0.99875	0	0	0	0	3	1.35E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216030313	2	105232629	T	C	-	-	-	-	-	-	46	0	0	84	15	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.005	0.995	0	0	0	0	3	3.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216030373	2	105880440	G	C	TGFBRAP1	CCDS2067.1	r.?	-	-	downstream	44	0	0	61	17	27.86885246	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.37704918	1.37704918	1	0	0	1	0	0	0	0	3	3.33E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216030780	2	109169554	G	C	LIMS1	ENST00000428064	r.?	-	-	intronic	33	0	0	65	16	24.61538462	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.216289593	1.216289593	1	0	0	1	0	0	0	0	3	7.85E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216031353	2	113729143	G	C	IL1F9	ENST00000447128	r.?	-	-	upstream	32	0	0	70	14	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.0025	0.9975	0	0	0	0	3	9.08E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216031355	2	113738918	G	C	IL1F9	CCDS2108.1	r.?	-	-	intronic	37	0	0	57	7	12.28070175	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.606811146	0.606811146	1	0.005	0.06625	0.92875	0	0	0	0	3	1.66E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216031835	2	116187519	T	C	DPP10	CCDS46400.1	r.?	-	-	intronic	28	0	0	91	18	19.78021978	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.977375566	0.977375566	1	0	0	1	0	0	0	0	3	1.27E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216031887	2	116463280	T	C	DPP10	CCDS46400.1	r.?	-	-	intronic	37	0	0	75	15	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	5.25E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216032005	2	117327474	A	C	-	-	-	-	-	-	30	0	0	60	10	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01125	0.98875	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216032498	2	120924480	A	C	EPB41L5	CCDS2130.1	r.?	-	-	intronic	32	0	0	53	11	20.75471698	179	0	0	100	9	9							4	2	2	1	NA	NA	NA	unphased	1.025527192	1.025527192	1	0	0.00375	0.99625	0	0	0	0	3	3.07E-15	1	2.47E-09	1	YES	somatic	1_1
1353824	PD9772b	1216033431	2	129500234	G	C	-	-	-	-	-	-	29	0	0	30	8	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.00375	0.99625	0	0	0	0	3	2.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216033530	2	130587168	G	C	-	-	-	-	-	-	34	0	0	61	16	26.2295082	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.033751205	1.033751205	1	0	0.00125	0.99875	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216036340	2	139983390	T	C	-	-	-	-	-	-	37	0	0	64	15	23.4375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.923713235	0.923713235	1	0	0.00375	0.99625	0	0	0	0	3	3.87E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216036771	2	143537269	G	C	-	-	-	-	-	-	34	0	0	74	19	25.67567568	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.011923688	1.011923688	1	0	0	1	0	0	0	0	3	3.14E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216037175	2	147826745	G	C	-	-	-	-	-	-	27	0	0	45	15	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	9.14E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216037196	2	147987570	T	C	-	-	-	-	-	-	31	0	0	74	17	22.97297297	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.905405405	0.905405405	1	0	0.00125	0.99875	0	0	0	0	3	1.34E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216037228	2	148307992	G	C	-	-	-	-	-	-	32	0	0	50	12	24	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.945882353	0.945882353	1	0	0.0025	0.9975	0	0	0	0	3	2.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216037377	2	149924478	G	C	LYPD6B	CCDS46423.1	r.?	-	-	intronic	25	0	0	98	11	11.2244898	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	0.666866747	0.666866747	1	0	0.0625	0.9375	0	0	0	0	3	3.67E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216037803	2	153552269	T	C	PRPF40A	CCDS46430.1	r.?	-	-	intronic	35	0	0	72	17	23.61111111	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.930555556	0.930555556	1	0	0.00125	0.99875	0	0	0	0	3	7.97E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216037890	2	154565148	G	C	-	-	-	-	-	-	40	0	0	62	17	27.41935484	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.080645161	1.080645161	1	0	0	1	0	0	0	0	3	4.56E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216037891	2	154570789	A	C	-	-	-	-	-	-	52	2	3.846153846	65	20	30.76923077	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.212669683	1.212669683	1	0	0	1	0	0	0	0	3	2.18E-30	0.028101652	1	1	NA	NA	NA
1353824	PD9772b	1216037932	2	155058536	G	C	GALNT13	CCDS2199.1	r.?	-	-	intronic	39	0	0	55	15	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0	1	0	0	0	0	3	3.01E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216038142	2	157314254	G	C	GPD2	CCDS2202.1	r.?	-	-	intronic	34	0	0	63	17	26.98412698	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.063492063	1.063492063	1	0	0	1	0	0	0	0	3	6.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216038211	2	158036346	A	C	-	-	-	-	-	-	31	0	0	50	12	24	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.945882353	0.945882353	1	0	0.0025	0.9975	0	0	0	0	3	2.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216038267	2	158891499	G	C	UPP2	CCDS46435.1	r.?	-	-	intronic	34	0	0	36	11	30.55555556	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.204248366	1.204248366	1	0	0.00125	0.99875	0	0	0	0	3	2.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216038418	2	160494519	A	C	-	-	-	-	-	-	27	0	0	37	9	24.32432432	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.958664547	0.958664547	1	0	0.00375	0.99625	0	0	0	0	3	2.14E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216038634	2	162449832	A	C	-	-	-	-	-	-	34	0	0	69	20	28.98550725	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.142369991	1.142369991	1	0	0	1	0	0	0	0	3	8.73E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216038737	2	164302316	A	C	-	-	-	-	-	-	37	0	0	66	17	25.75757576	183	0	0	358	63	17.59776536							3	2	1	1	NA	NA	NA	unphased	1.015151515	1.015151515	1	0	0.00125	0.99875	0	0	0	0	3	1.52E-24	1	3.02E-75	1	YES	somatic	1_1
1353824	PD9772b	1216038846	2	165725725	A	C	-	-	-	-	-	-	38	0	0	61	17	27.86885246	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.098360656	1.098360656	1	0	0	1	0	0	0	0	3	3.33E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216039156	2	168992585	G	C	STK39	CCDS42770.1	r.?	-	-	intronic	34	0	0	37	10	27.02702703	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.06518283	1.06518283	1	0	0.00125	0.99875	0	0	0	0	3	3.01E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216039649	2	173774871	G	C	RAPGEF4	CCDS42775.1	r.?	-	-	intronic	37	0	0	41	7	17.07317073	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.672883788	0.672883788	1	0.00375	0.045	0.95125	0	0	0	0	3	1.51E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216039674	2	174105821	G	C	ENSG00000091436	CCDS42777.1	r.?	-	-	intronic	26	0	0	45	7	15.55555556	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.613071895	0.613071895	1	0.005	0.0675	0.9275	0	0	0	0	3	3.00E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216039929	2	176546324	G	C	-	-	-	-	-	-	35	0	0	82	23	28.04878049	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.385939742	1.385939742	1	0	0	1	0	0	0	0	3	1.19E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216039976	2	176890411	G	C	-	-	-	-	-	-	39	0	0	73	13	17.80821918	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.879935536	0.879935536	1	0	0.00375	0.99625	0	0	0	0	3	7.97E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216040014	2	177255370	A	C	-	-	-	-	-	-	43	0	0	69	17	24.63768116	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.217391304	1.217391304	1	0	0	1	0	0	0	0	3	3.56E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216040105	2	177926773	T	C	-	-	-	-	-	-	21	0	0	57	9	15.78947368	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.780185759	0.780185759	1	0	0.01125	0.98875	0	0	0	0	3	1.42E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216040194	2	178563949	G	C	PDE11A	CCDS42786.1	r.?	-	-	intronic	27	0	0	87	18	20.68965517	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.022312373	1.022312373	1	0	0	1	0	0	0	0	3	5.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216040440	2	180059219	G	C	SESTD1	CCDS33338.1	r.?	-	-	intronic	29	0	0	75	12	16	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0	0.00625	0.99375	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216041000	2	184734690	G	C	-	-	-	-	-	-	39	0	0	71	14	19.71830986	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.974316487	0.974316487	1	0	0.0025	0.9975	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216041318	2	187423643	T	C	-	-	-	-	-	-	36	0	0	74	19	25.67567568	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.268680445	1.268680445	1	0	0	1	0	0	0	0	3	3.14E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216041577	2	189360566	T	C	GULP1	CCDS2295.1	r.?	-	-	intronic	32	0	0	88	14	15.90909091	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.786096257	0.786096257	1	0	0.01375	0.98625	0	0	0	0	3	2.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216041608	2	189609895	T	C	DIRC1	CCDS2296.1	r.?	-	-	intronic	39	0	0	68	15	22.05882353	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.089965398	1.089965398	1	0	0.0025	0.9975	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216041674	2	190198332	T	C	-	-	-	-	-	-	30	0	0	72	13	18.05555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.892156863	0.892156863	1	0	0.005	0.995	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216042380	2	195358357	T	C	-	-	-	-	-	-	38	0	0	77	19	24.67532468	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.219251337	1.219251337	1	0	0.00125	0.99875	0	0	0	0	3	7.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216042585	2	197375406	T	C	HECW2	CCDS33354.1	r.?	-	-	intronic	38	0	0	72	16	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	4.82E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216042661	2	197984359	A	C	ANKRD44	CCDS33355.1	r.?	-	-	intronic	52	0	0	97	22	22.68041237	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.1206792	1.1206792	1	0	0	1	0	0	0	0	3	5.74E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216043435	2	203337803	G	C	BMPR2	CCDS33361.1	r.?	-	-	intronic	48	0	0	74	16	21.62162162	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	1.06836248	1.06836248	1	0	0	1	0	0	0	0	3	7.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216043977	2	208225525	T	C	-	-	-	-	-	-	44	0	0	75	19	25.33333333	1	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.998431373	0.998431373	1	0	0	1	0	0	0	0	3	4.19E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216044334	2	211968547	A	C	-	-	-	-	-	-	45	0	0	52	13	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	6.47E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216044740	2	215802397	T	C	ABCA12	CCDS33372.1	r.?	-	-	intronic	35	0	0	54	17	31.48148148	0	0	NA	1	1	100							3	2	1	1	NA	NA	NA	unphased	1.240740741	1.240740741	1	0	0	1	0	0	0	0	3	3.02E-26	1	0.005	1	NA	NA	NA
1353824	PD9772b	1216044947	2	217697654	T	C	-	-	-	-	-	-	30	0	0	19	4	21.05263158	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.829721362	0.829721362	1	0	0.01375	0.98625	0	0	0	0	3	2.28E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216045174	2	220256974	T	C	DNPEP	CCDS42823.1	r.?	-	-	upstream	45	0	0	54	17	31.48148148	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.240740741	1.240740741	1	0	0	1	0	0	0	0	3	3.02E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216045319	2	221675888	T	C	-	-	-	-	-	-	33	0	0	61	22	36.06557377	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.421407907	0.710703954	2	0	0.03125	0.96875	0	0	0	0	3	4.38E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216045517	2	223580337	A	C	-	-	-	-	-	-	47	0	0	60	16	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0	1	0	0	0	0	3	1.86E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216046063	2	229037696	T	C	SPHKAP	CCDS46537.1	r.?	-	-	intronic	42	0	0	62	15	24.19354839	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.953510436	0.953510436	1	0	0	1	0	0	0	0	3	2.28E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216046165	2	230070656	G	C	PID1	CCDS2471.1	r.?	-	-	intronic	36	0	0	56	22	39.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.548319328	0.774159664	2	0	0.00625	0.99375	0	0	0	0	3	4.34E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216046581	2	233814270	G	C	NGEF	CCDS2500.1	r.?	-	-	intronic	32	0	0	18	3	16.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.656862745	0.656862745	1	0.0025	0.0425	0.955	0	0	0	0	3	9.64E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216046668	2	234961876	G	C	SPP2	CCDS2511.1	r.?	-	-	intronic	33	0	0	87	17	19.54022989	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.770114943	0.770114943	1	0	0.005	0.995	0	0	0	0	3	2.71E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216047173	2	240900883	A	C	NDUFA10	CCDS2531.1	r.?	-	-	intronic	40	0	0	11	4	36.36363636	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.43315508	1.43315508	1	0.00125	0.01	0.98875	0	0	0	0	3	2.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216048357	20	9561540	G	C	PAK7	CCDS13107.1	r.789c>g	c.242C>G	p.S81C	missense	38	0	0	46	7	15.2173913	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.599744246	0.599744246	1	0.00125	0.08375	0.915	0	0	0	0	3	3.53E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216048685	20	13028607	G	C	SPTLC3	CCDS13115.2	r.?	-	-	intronic	45	0	0	66	20	30.3030303	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.1942959	1.1942959	1	0	0	1	0	0	0	0	3	3.11E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216048703	20	13180148	G	C	-	-	-	-	-	-	33	0	0	61	19	31.14754098	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.227579556	1.227579556	1	0	0	1	0	0	0	0	3	4.64E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216049003	20	16143097	G	C	-	-	-	-	-	-	25	0	0	53	16	30.18867925	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.189789123	1.189789123	1	0	0	1	0	0	0	0	3	1.90E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216049050	20	16443111	T	C	KIF16B	CCDS13122.1	r.?	-	-	intronic	38	0	0	49	12	24.48979592	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.965186074	0.965186074	1	0	0.00625	0.99375	0	0	0	0	3	1.90E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216049421	20	20699755	T	C	-	-	-	-	-	-	52	0	0	36	11	30.55555556	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.204248366	1.204248366	1	0	0.0025	0.9975	0	0	0	0	3	2.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216049589	20	22421019	T	C	-	-	-	-	-	-	44	0	0	65	18	27.69230769	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.091402715	1.091402715	1	0	0	1	0	0	0	0	3	1.52E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216049751	20	24288626	G	C	-	-	-	-	-	-	39	0	0	75	17	22.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.893333333	0.893333333	1	0	0.0025	0.9975	0	0	0	0	3	1.72E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216054859	20	30483991	G	C	TTLL9	CCDS42863.1	r.?	-	-	intronic	47	0	0	15	4	26.66666667	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.784313725	0.784313725	1	0.0025	0.03625	0.96125	0	0	0	0	3	8.16E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216055056	20	32084107	T	C	CBFA2T2	CCDS13221.1	r.?	-	-	intronic	29	0	0	72	10	13.88888889	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.408496732	0.408496732	1	0.09	0.82375	0.08625	0	0	0	0	2	3.95E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216055121	20	32597459	G	C	RALY	CCDS13229.1	r.?	-	-	intronic	30	0	0	55	13	23.63636364	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.695187166	0.695187166	1	0	0.04125	0.95875	0	0	0	0	3	1.46E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216055300	20	33958315	G	C	UQCC	CCDS13252.1	r.?	-	-	intronic	40	0	0	70	21	30	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0	1	0	0	0	0	3	1.45E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216055332	20	34236730	A	C	RBM12	CCDS13261.1	r.?	-	-	downstream	33	0	0	83	19	22.89156627	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.673281361	0.673281361	1	0	0.04625	0.95375	0	0	0	0	3	3.60E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216056333	20	46510141	T	C	-	-	-	-	-	-	29	0	0	56	15	26.78571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.055672269	1.055672269	1	0	0.00125	0.99875	0	0	0	0	3	4.09E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216056640	20	49632977	A	C	KCNG1	CCDS13436.1	r.?	-	-	intronic	36	0	0	27	13	48.14814815	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.897603486	0.948801743	2	0	0.00125	0.99875	0	0	0	0	3	2.29E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216056836	20	51518683	G	C	-	-	-	-	-	-	34	0	0	62	15	24.19354839	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.953510436	0.953510436	1	0	0	1	0	0	0	0	3	2.28E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216057442	20	57486349	G	C	GNAS	CCDS46622.1	r.?	-	-	downstream	31	0	0	63	8	12.6984127	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.500466853	0.500466853	1	0.01625	0.30875	0.675	0	0	0	0	3	1.18E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216057481	20	57995344	G	C	-	-	-	-	-	-	27	0	0	53	15	28.30188679	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.115427303	1.115427303	1	0	0	1	0	0	0	0	3	1.60E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216069013	21	15650302	T	C	-	-	-	-	-	-	30	0	0	69	16	23.1884058	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.145780051	1.145780051	1	0	0	1	0	0	0	0	3	2.27E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216069026	21	15752517	A	C	HSPA13	CCDS13567.1	r.?	-	-	intronic	38	0	0	82	16	19.51219512	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.964131994	0.964131994	1	0	0.0025	0.9975	0	0	0	0	3	4.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216069049	21	15923847	T	C	SAMSN1	ENST00000285670	r.?	-	-	intronic	41	0	0	83	14	16.86746988	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.833451453	0.833451453	1	0	0.00875	0.99125	0	0	0	0	3	1.17E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216069362	21	18628048	G	C	-	-	-	-	-	-	41	0	0	83	13	15.6626506	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.773919206	0.773919206	1	0	0.02125	0.97875	0	0	0	0	3	4.66E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216069436	21	19045308	G	C	-	-	-	-	-	-	37	0	0	89	17	19.1011236	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.943820225	0.943820225	1	0	0	1	0	0	0	0	3	4.11E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216069840	21	22043228	T	C	-	-	-	-	-	-	42	0	0	81	20	24.69135802	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.220043573	1.220043573	1	0	0	1	0	0	0	0	3	3.35E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216070040	21	23564072	G	C	-	-	-	-	-	-	56	0	0	85	15	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0	1	0	0	0	0	3	3.95E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216070122	21	24066640	G	C	-	-	-	-	-	-	36	0	0	74	10	13.51351351	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.66772655	0.66772655	1	0.00375	0.04125	0.955	0	0	0	0	3	5.24E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216070254	21	25196845	T	C	-	-	-	-	-	-	33	0	0	65	12	18.46153846	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.912217195	0.912217195	1	0	0.0025	0.9975	0	0	0	0	3	7.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216070891	21	29307899	A	C	-	-	-	-	-	-	42	0	0	79	15	18.98734177	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.938198064	0.938198064	1	0	0.00125	0.99875	0	0	0	0	3	1.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216070914	21	29433775	T	C	-	-	-	-	-	-	40	0	0	79	15	18.98734177	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.938198064	0.938198064	1	0	0.00125	0.99875	0	0	0	0	3	1.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216070979	21	29876632	A	C	-	-	-	-	-	-	40	0	0	78	21	26.92307692	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.330316742	1.330316742	1	0	0	1	0	0	0	0	3	1.99E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216071160	21	31488757	T	C	-	-	-	-	-	-	32	0	0	85	11	12.94117647	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.639446367	0.639446367	1	0	0.0825	0.9175	0	0	0	0	3	7.42E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216071213	21	31825382	A	C	-	-	-	-	-	-	36	0	0	47	7	14.89361702	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.7359199	0.7359199	1	0.00125	0.03	0.96875	0	0	0	0	3	4.12E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216071232	21	31905807	A	C	-	-	-	-	-	-	35	0	0	61	12	19.67213115	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.972034716	0.972034716	1	0	0.005	0.995	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216071299	21	32422047	G	C	TIAM1	ENST00000461148	r.?	-	-	intronic	36	0	0	63	18	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0	1	0	0	0	0	3	7.98E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216071343	21	32705153	T	C	TIAM1	CCDS13609.1	r.?	-	-	intronic	28	0	0	53	10	18.86792453	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.932297447	0.932297447	1	0	0.00125	0.99875	0	0	0	0	3	1.57E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216071386	21	32906891	G	C	TIAM1	CCDS13609.1	r.?	-	-	intronic	36	0	0	83	13	15.6626506	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.773919206	0.773919206	1	0	0.0125	0.9875	0	0	0	0	3	4.66E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216071817	21	35910029	A	C	RCAN1	CCDS42921.1	r.?	-	-	intronic	39	0	0	57	13	22.80701754	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.126934985	1.126934985	1	0	0	1	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216072317	21	39870098	T	C	ERG	CCDS13657.1	r.?	-	-	intronic	44	0	0	74	13	17.56756757	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.868044515	0.868044515	1	0	0.005	0.995	0	0	0	0	3	9.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216072570	21	41685314	A	C	DSCAM	CCDS42929.1	r.?	-	-	intronic	35	0	0	58	12	20.68965517	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.022312373	1.022312373	1	0	0	1	0	0	0	0	3	1.76E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216072585	21	41721410	T	C	DSCAM	CCDS42929.1	r.?	-	-	intronic	38	0	0	80	17	21.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.05	1.05	1	0	0.00125	0.99875	0	0	0	0	3	5.75E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216072603	21	41973543	T	C	DSCAM	CCDS42929.1	r.?	-	-	intronic	27	0	0	85	11	12.94117647	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.639446367	0.639446367	1	0.00125	0.05875	0.94	0	0	0	0	3	7.42E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216072765	21	43222284	T	C	PRDM15	CCDS42932.1	r.?	-	-	intronic	37	0	0	57	10	17.54385965	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.866873065	0.866873065	1	0.00125	0.0125	0.98625	0	0	0	0	3	3.40E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216072812	21	43743590	A	C	-	-	-	-	-	-	52	0	0	79	21	26.58227848	0	0	NA	0	0	NA							0.032817529	0	0	0.967182471	1	0	0.032817529	unphased	0.258909797	0.258909797	1	0.9025	0.0975	0	0	0	0	0	1	2.69E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216072971	21	45373174	G	C	AGPAT3	CCDS13703.1	r.?	-	-	intronic	43	0	0	25	5	20	0	0	NA	0	0	NA							0.032817529	0	0	0.967182471	1	0	0.032817529	unphased	0.1947988	0.1947988	1	0.83375	0.16625	0	0	0	0	0	1	1.53E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216073070	21	46540782	T	C	ADARB1	CCDS33590.1	r.?	-	-	intronic	39	0	0	63	8	12.6984127	0	0	NA	0	0	NA							0.114544422	0	0	0.885455578	1	0	0.114544422	unphased	0.134059796	1.170373844	0.114544422	0	0.00375	0.99625	0	0	0	0	3	1.18E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216073176	21	47505689	A	C	-	-	-	-	-	-	30	0	0	7	3	42.85714286	0	0	NA	0	0	NA							0.114544422	0	0	0.885455578	1	0	0.114544422	unphased	0.452451811	0.452451811	1	0.07375	0.59125	0.335	0	0	0	0	2	4.31E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216073221	21	47825363	G	C	PCNT	CCDS33592.1	r.?	-	-	intronic	44	0	0	33	8	24.24242424	0	0	NA	0	0	NA							0.114544422	0	0	0.885455578	1	0	0.114544422	unphased	0.255932338	0.255932338	1	0.67125	0.32875	0	0	0	0	0	1	4.85E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216075215	22	21190490	G	C	PI4KA	CCDS33603.1	r.?	-	-	intronic	20	0	0	48	15	31.25	0	0	NA	0	0	NA							0.35554569	0	0	0.64445431	1	0	0.35554569	unphased	0.405225675	1.139728835	0.35554569	0	0.00125	0.99875	0	0	0	0	3	2.86E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216075555	22	23711336	T	C	-	-	-	-	-	-	27	0	0	56	7	12.5	0	0	NA	0	0	NA							1.861997243	1	0	0.138002757	1	1	0.861997243	unphased	0.350396714	0.350396714	1	0.18375	0.745	0.07125	0	0	0	0	2	1.46E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216075637	22	24542691	T	C	CABIN1	CCDS13823.1	r.?	-	-	intronic	31	0	0	44	10	22.72727273	0	0	NA	0	0	NA							1.861997243	1	0	0.138002757	1	1	0.861997243	unphased	0.637084935	0.739080015	0.861997243	0	0.0225	0.9775	0	0	0	0	3	2.08E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216075673	22	24793122	T	C	CYTSA	CCDS33619.1	r.?	-	-	intronic	22	0	0	77	13	16.88311688	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.003055768	1.003055768	1	0	0.00125	0.99875	0	0	0	0	3	1.67E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216075933	22	26062366	G	C	ADRBK2	CCDS13832.1	r.?	-	-	intronic	33	0	0	60	10	16.66666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.990196078	0.990196078	1	0	0.0025	0.9975	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216076158	22	27251680	T	C	-	-	-	-	-	-	35	0	0	89	27	30.33707865	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.802379379	0.901189689	2	0	0.00125	0.99875	0	0	0	0	3	2.66E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216076372	22	28776893	T	C	TTC28	CCDS46678.1	r.?	-	-	intronic	33	0	0	115	17	14.7826087	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.87826087	0.87826087	1	0	0.00625	0.99375	0	0	0	0	3	4.19E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216077218	22	36651789	G	C	APOL1	CCDS13925.1	r.?	-	-	intronic	37	0	0	40	13	32.5	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.416939366	1.22014171	0.341713887	0	0	1	0	0	0	0	3	1.30E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216077436	22	39731726	G	C	-	-	-	-	-	-	41	0	0	21	7	33.33333333	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.427630119	0.427630119	1	0.1025	0.82375	0.07375	0	0	0	0	2	8.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216078220	22	49809668	G	C	-	-	-	-	-	-	43	0	0	30	7	23.33333333	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.299341083	0.875999177	0.341713887	0	0.01875	0.98125	0	0	0	0	3	1.44E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216078232	22	49955711	T	C	-	-	-	-	-	-	40	0	0	60	16	26.66666667	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.342104095	1.001141916	0.341713887	0	0	1	0	0	0	0	3	1.86E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216079339	3	7923326	T	C	-	-	-	-	-	-	31	0	0	75	24	32	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.261176471	1.261176471	1	0	0	1	0	0	0	0	3	1.20E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216079563	3	10089377	G	C	FANCD2	CCDS2595.1	r.?	-	-	intronic	42	0	0	82	14	17.07317073	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.672883788	0.672883788	1	0	0.05375	0.94625	0	0	0	0	3	9.77E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216079750	3	12236420	T	C	SYN2	ENST00000341648	r.?	-	-	downstream	35	0	0	40	5	12.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.492647059	0.492647059	1	0.02	0.16625	0.81375	0	0	0	0	3	1.78E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216080050	3	15790120	A	C	ANKRD28	CCDS46769.1	r.?	-	-	intronic	34	0	0	63	18	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	7.98E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216080655	3	22148454	A	C	-	-	-	-	-	-	34	0	0	48	16	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	2.96E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216080984	3	25781792	T	C	NGLY1	CCDS46778.1	r.?	-	-	intronic	47	0	0	85	21	24.70588235	141	0	0	335	57	17.01492537							3	2	1	1	NA	NA	NA	unphased	0.973702422	0.973702422	1	0	0	1	0	0	0	0	3	1.53E-29	1	2.35E-67	1	YES	somatic	1_1
1353824	PD9772b	1216081448	3	30855128	T	C	GADL1	CCDS2649.2	r.?	-	-	intronic	34	0	0	73	15	20.54794521	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.809830782	0.809830782	1	0	0.00875	0.99125	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216081852	3	35572607	A	C	-	-	-	-	-	-	43	0	0	70	21	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0	1	0	0	0	0	3	1.45E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216082138	3	38292773	T	C	OXSR1	CCDS2675.1	r.?	-	-	intronic	31	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0.005	0.995	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216083279	3	49641630	T	C	BSN	CCDS2800.1	r.?	-	-	intronic	30	0	0	57	14	24.56140351	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.968008256	0.968008256	1	0	0.0025	0.9975	0	0	0	0	3	3.84E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216083542	3	53399558	T	C	-	-	-	-	-	-	15	1	6.666666667	49	16	32.65306122	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.286914766	1.286914766	1	0	0	1	0	0	0	0	3	4.37E-25	0.072431031	1	1	NA	NA	NA
1353824	PD9772b	1216084253	3	60581716	G	C	FHIT	CCDS2894.1	r.?	-	-	intronic	43	0	0	60	13	21.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.853921569	0.853921569	1	0	0.00625	0.99375	0	0	0	0	3	5.07E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216084287	3	60862083	A	C	FHIT	CCDS2894.1	r.?	-	-	intronic	27	0	0	56	11	19.64285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.774159664	0.774159664	1	0	0.01	0.99	0	0	0	0	3	5.91E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216085076	3	69098292	T	C	TMF1	CCDS43105.1	r.?	-	-	intronic	37	0	0	57	13	22.80701754	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.898864809	0.898864809	1	0	0.00875	0.99125	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216085450	3	72552105	G	C	-	-	-	-	-	-	29	0	0	53	10	18.86792453	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.743618202	0.743618202	1	0.00125	0.04	0.95875	0	0	0	0	3	1.57E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216087929	3	79528463	A	C	ROBO1	ENST00000464233	r.?	-	-	intronic	38	0	0	55	8	14.54545455	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.573262032	0.573262032	1	0	0.11375	0.88625	0	0	0	0	3	3.86E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216087947	3	79719564	A	C	ROBO1	ENST00000464233	r.?	-	-	intronic	41	0	0	58	18	31.03448276	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.223123732	1.223123732	1	0	0	1	0	0	0	0	3	1.42E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216088000	3	80203224	G	C	-	-	-	-	-	-	40	0	0	55	16	29.09090909	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.146524064	1.146524064	1	0	0	1	0	0	0	0	3	3.78E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216088007	3	80276913	A	C	-	-	-	-	-	-	35	0	0	50	15	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0	1	0	0	0	0	3	5.83E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216088178	3	82254040	T	C	-	-	-	-	-	-	42	0	0	52	11	21.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.833710407	0.833710407	1	0	0.005	0.995	0	0	0	0	3	2.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216088182	3	82311972	G	C	-	-	-	-	-	-	48	0	0	71	13	18.30985915	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.721623861	0.721623861	1	0	0.025	0.975	0	0	0	0	3	5.42E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216088287	3	83461852	T	C	-	-	-	-	-	-	28	0	0	55	11	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.0175	0.9825	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216088353	3	84363149	G	C	-	-	-	-	-	-	60	0	0	76	16	21.05263158	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.829721362	0.829721362	1	0	0.005	0.995	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216089517	3	94183516	G	C	-	-	-	-	-	-	30	0	0	61	7	11.47540984	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.567020251	0.567020251	1	0.00625	0.09875	0.895	0	0	0	0	3	2.69E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216089664	3	95331562	G	C	-	-	-	-	-	-	51	0	0	65	12	18.46153846	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.912217195	0.912217195	1	0	0.0075	0.9925	0	0	0	0	3	7.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216089828	3	96361571	G	C	-	-	-	-	-	-	37	0	0	80	22	27.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.358823529	1.358823529	1	0	0	1	0	0	0	0	3	4.89E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216089877	3	96910234	G	C	EPHA6	CCDS46876.1	r.?	-	-	intronic	43	0	0	98	21	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	4.19E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216089930	3	97406924	G	C	EPHA6	CCDS46876.1	r.?	-	-	intronic	37	0	0	81	14	17.28395062	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.854030501	0.854030501	1	0	0.00125	0.99875	0	0	0	0	3	8.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216089931	3	97408465	T	C	EPHA6	CCDS46876.1	r.?	-	-	intronic	36	0	0	54	10	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.00625	0.99375	0	0	0	0	3	1.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216089966	3	97599474	G	C	CRYBG3	CCDS43113.1	r.?	-	-	intronic	38	0	0	73	10	13.69863014	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.676873489	0.676873489	1	0	0.045	0.955	0	0	0	0	3	4.56E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216090373	3	100898815	G	C	-	-	-	-	-	-	33	0	0	76	15	19.73684211	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0.0025	0.9975	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216090404	3	101216945	T	C	SENP7	CCDS2941.2	r.?	-	-	intronic	22	0	0	86	15	17.44186047	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.861833105	0.861833105	1	0	0.00375	0.99625	0	0	0	0	3	4.76E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216090565	3	102137522	A	C	ZPLD1	ENST00000491959	r.?	-	-	intronic	32	0	0	99	19	19.19191919	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.140225787	1.140225787	1	0	0	1	0	0	0	0	3	1.40E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216090643	3	102843938	G	C	-	-	-	-	-	-	43	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0.00125	0.99875	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216090661	3	102945713	T	C	-	-	-	-	-	-	39	0	0	81	17	20.98765432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.037037037	1.037037037	1	0	0	1	0	0	0	0	3	7.24E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216090806	3	104248717	G	C	-	-	-	-	-	-	26	0	0	84	11	13.0952381	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.647058824	0.647058824	1	0.00125	0.06625	0.9325	0	0	0	0	3	6.49E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216091179	3	106902370	G	C	-	-	-	-	-	-	34	0	0	78	12	15.38461538	142	0	0	497	53	10.6639839							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.015	0.985	0	0	0	0	3	7.82E-15	1	1.33E-51	1	YES	somatic	1_1
1353824	PD9772b	1216091268	3	107789563	G	C	CD47	CCDS46882.1	r.?	-	-	intronic	34	0	0	89	20	22.47191011	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.110376735	1.110376735	1	0	0	1	0	0	0	0	3	2.72E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216091795	3	112421356	T	C	-	-	-	-	-	-	34	0	0	81	22	27.16049383	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.070442992	1.070442992	1	0	0	1	0	0	0	0	3	6.68E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216092054	3	115384403	G	C	GAP43	CCDS46890.1	r.?	-	-	intronic	41	0	0	62	17	27.41935484	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.080645161	1.080645161	1	0	0	1	0	0	0	0	3	4.56E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216092300	3	117755376	G	C	-	-	-	-	-	-	33	0	0	70	14	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.015	0.985	0	0	0	0	3	9.08E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216092596	3	120533543	G	C	-	-	-	-	-	-	32	0	0	38	12	31.57894737	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.244582043	1.244582043	1	0	0	1	0	0	0	0	3	5.86E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216092644	3	121088675	T	C	STXBP5L	CCDS43137.1	r.?	-	-	intronic	35	0	0	70	14	20	0	0	NA	1	0	0							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.01125	0.98875	0	0	0	0	3	9.08E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216093222	3	125544421	G	C	-	-	-	-	-	-	35	0	0	34	8	23.52941176	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.00875	0.99125	0	0	0	0	3	6.32E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216093432	3	128394593	G	C	RPN1	ENST00000497289	r.?	-	-	intronic	30	0	0	48	7	14.58333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.574754902	0.574754902	1	0.005	0.12	0.875	0	0	0	0	3	4.81E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216093463	3	128731714	G	C	CCDC48	ENST00000480450	r.?	-	-	intronic	32	0	0	26	4	15.38461538	313	0	0	82	16	19.51219512							3	2	1	1	NA	NA	NA	unphased	0.606334842	0.606334842	1	0.00375	0.05375	0.9425	0	0	0	0	3	8.56E-06	1	4.67E-21	1	YES	somatic	1_1
1353824	PD9772b	1216093558	3	129617973	G	C	-	-	-	-	-	-	34	0	0	61	14	22.95081967	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.904532305	0.904532305	1	0	0.00125	0.99875	0	0	0	0	3	1.10E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216093708	3	130133720	T	C	COL29A1	ENST00000312481	r.?	-	-	intronic	51	0	0	52	11	21.15384615	219	0	0	175	33	18.85714286							3	2	1	1	NA	NA	NA	unphased	0.833710407	0.833710407	1	0	0.0075	0.9925	0	0	0	0	3	2.44E-15	1	2.80E-41	1	YES	somatic	1_1
1353824	PD9772b	1216094532	3	139196976	G	C	RBP2	CCDS3109.1	r.?	-	-	upstream	27	0	0	47	13	27.65957447	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.090112641	1.090112641	1	0	0.0025	0.9975	0	0	0	0	3	1.47E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216094735	3	141460949	T	C	RNF7	CCDS3118.1	r.?	-	-	intronic	31	0	0	26	8	30.76923077	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.212669683	1.212669683	1	0	0.005	0.995	0	0	0	0	3	5.63E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216095106	3	145311443	G	C	-	-	-	-	-	-	38	0	0	64	19	29.6875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.170036765	1.170036765	1	0	0	1	0	0	0	0	3	1.34E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216095488	3	149280798	G	C	WWTR1	CCDS3144.1	r.?	-	-	intronic	38	0	0	54	16	29.62962963	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.167755991	1.167755991	1	0	0	1	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216095637	3	150971805	T	C	MED12L	CCDS33876.1	r.?	-	-	intronic	29	0	0	71	13	18.30985915	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.721623861	0.721623861	1	0	0.02625	0.97375	0	0	0	0	3	5.42E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216095830	3	152839697	A	C	-	-	-	-	-	-	38	0	0	50	10	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.015	0.985	0	0	0	0	3	8.36E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216095956	3	154077353	T	C	GPR149	CCDS43162.1	r.?	-	-	intronic	36	0	0	59	12	20.33898305	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.801595214	0.801595214	1	0	0.0125	0.9875	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216096050	3	155023285	T	C	-	-	-	-	-	-	40	0	0	50	7	14	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.551764706	0.551764706	1	0.0025	0.12	0.8775	0	0	0	0	3	6.46E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216096202	3	156603298	G	C	LEKR1	CCDS33883.1	r.?	-	-	intronic	27	0	0	62	14	22.58064516	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.889943074	0.889943074	1	0	0.005	0.995	0	0	0	0	3	1.42E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216096428	3	159154860	T	C	SCHIP1	CCDS3186.1	r.?	-	-	intronic	34	0	0	72	19	26.38888889	234	0	0	276	29	10.50724638							3	2	1	1	NA	NA	NA	unphased	1.04003268	1.04003268	1	0	0	1	0	0	0	0	3	1.75E-27	1	8.48E-29	1	YES	somatic	1_1
1353824	PD9772b	1216096592	3	161208608	G	C	-	-	-	-	-	-	44	0	0	61	15	24.59016393	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.969141755	0.969141755	1	0	0.00125	0.99875	0	0	0	0	3	1.73E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216096761	3	162855429	T	C	-	-	-	-	-	-	42	0	0	67	16	23.88059701	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.00375	0.99625	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216097064	3	165885707	T	C	-	-	-	-	-	-	37	0	0	71	13	18.30985915	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.721623861	0.721623861	1	0.00125	0.03	0.96875	0	0	0	0	3	5.42E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216098058	3	177025441	T	C	-	-	-	-	-	-	34	0	0	50	13	26	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.024705882	1.024705882	1	0	0.00125	0.99875	0	0	0	0	3	3.65E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216098158	3	178061841	A	C	KCNMB2	ENST00000437510	r.?	-	-	intronic	41	0	0	33	7	21.21212121	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.83600713	0.83600713	1	0	0.01	0.99	0	0	0	0	3	2.98E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216098262	3	179105713	G	C	MFN1	CCDS3228.1	r.?	-	-	intronic	32	0	0	26	10	38.46153846	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.900452489	0.950226244	2	0	0.0025	0.9975	0	0	0	0	3	4.82E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216098285	3	179243639	T	C	-	-	-	-	-	-	38	0	0	22	8	36.36363636	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.796791444	1.796791444	1	0	0.00125	0.99875	0	0	0	0	3	1.17E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216098591	3	181785273	T	C	-	-	-	-	-	-	38	0	0	65	17	26.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.030769231	1.030769231	1	0	0.00125	0.99875	0	0	0	0	3	1.14E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216099134	3	187102707	T	C	-	-	-	-	-	-	23	0	0	62	23	37.09677419	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.462049336	0.731024668	2	0	0.01375	0.98625	0	0	0	0	3	5.90E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216099271	3	188207773	A	C	LPP	CCDS3291.1	r.?	-	-	intronic	30	0	0	59	12	20.33898305	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.801595214	0.801595214	1	0	0.0075	0.9925	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216099364	3	188828294	T	C	TPRG1	CCDS3292.1	r.?	-	-	intronic	28	0	0	84	18	21.42857143	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	2.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216099444	3	189349544	T	C	TP63	CCDS3293.1	r.?	-	-	intronic	39	0	0	79	12	15.18987342	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.750558451	0.750558451	1	0	0.0175	0.9825	0	0	0	0	3	9.17E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216099520	3	189868263	G	C	-	-	-	-	-	-	33	0	0	65	14	21.53846154	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.064253394	1.064253394	1	0	0.00375	0.99625	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216099545	3	190092327	G	C	-	-	-	-	-	-	24	0	0	69	11	15.94202899	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.787723785	0.787723785	1	0	0.00875	0.99125	0	0	0	0	3	6.82E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216099554	3	190118927	A	C	CLDN16	CCDS3296.1	r.?	-	-	intronic	36	0	0	76	15	19.73684211	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0.00125	0.99875	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216099800	3	191954049	G	C	FGF12	CCDS3301.1	r.?	-	-	intronic	38	0	0	76	13	17.10526316	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.845201238	0.845201238	1	0	0.00875	0.99125	0	0	0	0	3	1.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216100650	3	196601070	A	C	SENP5	CCDS3322.1	r.?	-	-	intronic	53	0	0	75	15	20	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	5.25E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216100683	3	196859022	T	C	DLG1	CCDS3327.1	r.?	-	-	intronic	29	0	0	42	10	23.80952381	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.176470588	1.176470588	1	0	0.00375	0.99625	0	0	0	0	3	1.24E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216100705	3	196997890	G	C	DLG1	CCDS3327.1	r.?	-	-	intronic	31	0	0	71	19	26.76056338	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.322286661	1.322286661	1	0	0	1	0	0	0	0	3	1.29E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216101157	4	709953	A	C	PCGF3	CCDS3339.2	r.?	-	-	intronic	30	0	0	6	2	33.33333333	0	0	NA	0	0	NA							0.469229117	0	0	0.530770883	1	0	0.469229117	unphased	0.470135196	0.470135196	1	0.0175	0.12375	0.85875	0	0	0	0	3	0.000370028	1	1	1	NA	NA	NA
1353824	PD9772b	1216101837	4	6708141	G	C	MRFAP1L1	CCDS3392.1	r.?	-	-	downstream	43	0	0	70	17	24.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.957142857	0.957142857	1	0	0	1	0	0	0	0	3	4.68E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216102568	4	13380436	T	C	RAB28	CCDS3409.1	r.?	-	-	intronic	40	0	0	47	12	25.53191489	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.006257822	1.006257822	1	0	0.00375	0.99625	0	0	0	0	3	1.09E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216102614	4	14042548	T	C	-	-	-	-	-	-	38	0	0	72	23	31.94444444	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.258986928	1.258986928	1	0	0	1	0	0	0	0	3	3.67E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216102810	4	16119854	G	C	-	-	-	-	-	-	37	0	0	49	18	36.73469388	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.447779112	0.723889556	2	0	0.015	0.985	0	0	0	0	3	3.80E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216103055	4	18757618	G	C	-	-	-	-	-	-	28	0	0	67	11	16.41791045	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.647058824	0.647058824	1	0	0.06125	0.93875	0	0	0	0	3	4.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216103522	4	23492847	T	C	-	-	-	-	-	-	37	0	0	51	17	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	9.59E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216103639	4	24394442	T	C	-	-	-	-	-	-	29	0	0	78	25	32.05128205	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.263197587	1.263197587	1	0	0	1	0	0	0	0	3	3.94E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1216103975	4	27544311	G	C	-	-	-	-	-	-	50	0	0	74	14	18.91891892	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.745627981	0.745627981	1	0	0.02125	0.97875	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216104465	4	32353636	G	C	-	-	-	-	-	-	31	0	0	53	15	28.30188679	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.115427303	1.115427303	1	0	0.00375	0.99625	0	0	0	0	3	1.60E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216104546	4	33584870	T	C	-	-	-	-	-	-	43	0	0	58	18	31.03448276	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.223123732	1.223123732	1	0	0	1	0	0	0	0	3	1.42E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216104788	4	34899431	A	C	-	-	-	-	-	-	37	0	0	52	11	21.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.833710407	0.833710407	1	0	0.01125	0.98875	0	0	0	0	3	2.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216104946	4	36186218	G	C	ARAP2	CCDS3441.1	r.?	-	-	intronic	44	0	0	67	13	19.40298507	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.01875	0.98125	0	0	0	0	3	2.41E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216105006	4	36961318	T	C	-	-	-	-	-	-	33	0	0	64	16	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	5.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216105226	4	39006285	T	C	TMEM156	CCDS3448.1	r.?	-	-	intronic	42	0	0	50	16	32	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.261176471	1.261176471	1	0	0	1	0	0	0	0	3	6.40E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216105241	4	39148268	T	C	-	-	-	-	-	-	43	0	0	89	19	21.34831461	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.841374752	0.841374752	1	0	0.005	0.995	0	0	0	0	3	1.55E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216105800	4	43253216	A	C	-	-	-	-	-	-	41	0	0	91	22	24.17582418	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.194570136	1.194570136	1	0	0	1	0	0	0	0	3	1.20E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216105873	4	43861474	T	C	-	-	-	-	-	-	47	0	0	79	16	20.25316456	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.000744602	1.000744602	1	0	0	1	0	0	0	0	3	2.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216106066	4	45308324	G	C	-	-	-	-	-	-	45	0	0	70	20	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0	1	0	0	0	0	3	1.22E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216109058	4	49312921	T	C	-	-	-	-	-	-	11	0	0	72	12	16.66666667	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01375	0.98625	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216111135	4	56154677	T	C	-	-	-	-	-	-	34	0	0	65	9	13.84615385	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.684162896	0.684162896	1	0	0.02875	0.97125	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216111190	4	56420532	T	C	PDCL2	CCDS47059.1	r.?	-	-	downstream	37	0	0	80	8	10	92	0	0	86	13	15.11627907							4	2	2	1	NA	NA	NA	unphased	0.494117647	0.494117647	1	0.00875	0.28	0.71125	0	0	0	0	3	8.22E-09	1	7.57E-16	1	YES	somatic	1_1
1353824	PD9772b	1216111214	4	56609522	T	C	-	-	-	-	-	-	29	0	0	51	9	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0.00125	0.00875	0.99	0	0	0	0	3	4.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216111219	4	56663809	G	C	-	-	-	-	-	-	35	0	0	95	17	17.89473684	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.884210526	0.884210526	1	0	0.00375	0.99625	0	0	0	0	3	1.35E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216111720	4	60268238	G	C	-	-	-	-	-	-	44	0	0	83	17	20.48192771	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.012048193	1.012048193	1	0	0	1	0	0	0	0	3	1.14E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216112136	4	63569080	T	C	-	-	-	-	-	-	27	0	0	48	10	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.00125	0.99875	0	0	0	0	3	5.37E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216112648	4	67484020	T	C	-	-	-	-	-	-	42	0	0	42	6	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.0375	0.96125	0	0	0	0	3	7.02E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216112826	4	68772306	T	C	TMPRSS11A	CCDS3519.1	r.?	-	-	downstream	38	0	0	95	21	22.10526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.092260062	1.092260062	1	0	0	1	0	0	0	0	3	2.05E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216113107	4	70589697	G	C	SULT1B1	CCDS3530.1	r.?	-	-	downstream	30	0	0	66	12	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.00625	0.99375	0	0	0	0	3	9.36E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216113352	4	72259678	G	C	SLC4A4	CCDS3549.1	r.?	-	-	intronic	42	0	0	73	18	24.65753425	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.21837228	1.21837228	1	0	0	1	0	0	0	0	3	1.62E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216113753	4	75418132	G	C	-	-	-	-	-	-	38	0	0	101	31	30.69306931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.516598719	0.758299359	2	0	0.00875	0.99125	0	0	0	0	3	3.17E-46	1	1	1	NA	NA	NA
1353824	PD9772b	1216113776	4	75681983	A	C	BTC	CCDS3566.1	r.?	-	-	intronic	24	0	0	83	15	18.07228916	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.8929837	0.8929837	1	0	0.00125	0.99875	0	0	0	0	3	2.70E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216113957	4	77027810	G	C	ART3	CCDS47079.1	r.?	-	-	intronic	37	0	0	76	20	26.31578947	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.300309598	1.300309598	1	0	0	1	0	0	0	0	3	7.96E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216114087	4	78092106	T	C	CCNG2	CCDS3581.1	r.?	-	-	downstream	32	0	0	65	12	18.46153846	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.912217195	0.912217195	1	0	0.00375	0.99625	0	0	0	0	3	7.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216114283	4	79279962	T	C	FRAS1	ENST00000264895	r.?	-	-	intronic	32	0	0	91	14	15.38461538	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.914027149	0.914027149	1	0	0.00375	0.99625	0	0	0	0	3	4.55E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216114447	4	80539852	G	C	-	-	-	-	-	-	36	0	0	89	19	21.34831461	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.054857898	1.054857898	1	0	0	1	0	0	0	0	3	1.55E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216114726	4	82811769	T	C	-	-	-	-	-	-	38	0	0	83	23	27.71084337	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.369241673	1.369241673	1	0	0	1	0	0	0	0	3	1.64E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216115092	4	85616256	G	C	WDFY3	CCDS3609.1	r.?	-	-	intronic	36	0	0	56	9	16.07142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.794117647	0.794117647	1	0	0.0125	0.9875	0	0	0	0	3	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216115188	4	86454278	G	C	ARHGAP24	CCDS34025.1	r.?	-	-	intronic	36	0	0	82	11	13.41463415	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.662840746	0.662840746	1	0	0.0425	0.9575	0	0	0	0	3	4.94E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216115454	4	88435808	A	C	SPARCL1	CCDS3622.1	r.?	-	-	intronic	31	0	0	97	18	18.55670103	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.916919345	0.916919345	1	0	0	1	0	0	0	0	3	4.40E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216115456	4	88450788	G	C	SPARCL1	CCDS3622.1	r.?	-	-	upstream	27	0	0	76	10	13.15789474	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.650154799	0.650154799	1	0	0.06	0.94	0	0	0	0	3	6.90E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216115961	4	92579588	A	C	-	-	-	-	-	-	39	0	0	55	14	25.45454545	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.257754011	1.257754011	1	0	0	1	0	0	0	0	3	2.19E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216116027	4	93433463	G	C	GRID2	CCDS3637.1	r.?	-	-	intronic	36	0	0	93	17	18.27956989	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.903225806	0.903225806	1	0	0.00375	0.99625	0	0	0	0	3	9.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216116031	4	93564989	A	C	GRID2	CCDS3637.1	r.?	-	-	intronic	36	0	0	74	11	14.86486486	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.734499205	0.734499205	1	0.00125	0.0225	0.97625	0	0	0	0	3	1.53E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216116036	4	93614032	G	C	GRID2	CCDS3637.1	r.?	-	-	intronic	34	0	0	72	20	27.77777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.37254902	1.37254902	1	0	0	1	0	0	0	0	3	2.32E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216116149	4	94767510	G	C	-	-	-	-	-	-	34	0	0	89	17	19.1011236	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.943820225	0.943820225	1	0	0.00125	0.99875	0	0	0	0	3	4.11E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216116178	4	95003964	G	C	-	-	-	-	-	-	37	0	0	69	12	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.00625	0.99375	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216116334	4	96170889	G	C	UNC5C	CCDS3643.1	r.?	-	-	intronic	35	0	0	60	11	18.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.905882353	0.905882353	1	0	0.00375	0.99625	0	0	0	0	3	1.34E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216116754	4	99833741	G	C	EIF4E	CCDS34031.1	r.?	-	-	intronic	38	0	0	46	12	26.08695652	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.289002558	1.289002558	1	0	0	1	0	0	0	0	3	8.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216116969	4	101596210	T	C	-	-	-	-	-	-	27	0	0	81	13	16.04938272	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.793028322	0.793028322	1	0	0.015	0.985	0	0	0	0	3	3.34E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216117386	4	104261981	A	C	-	-	-	-	-	-	35	0	0	71	15	21.12676056	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.043910522	1.043910522	1	0	0	1	0	0	0	0	3	2.15E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216117528	4	105494772	A	C	-	-	-	-	-	-	26	0	0	75	16	21.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.054117647	1.054117647	1	0	0.00125	0.9975	0.00125	0	0	0	3	9.88E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216117727	4	106978889	G	C	TBCK	CCDS3673.1	r.?	-	-	intronic	39	0	0	80	19	23.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.173529412	1.173529412	1	0	0	1	0	0	0	0	3	1.65E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216117980	4	109218024	A	C	-	-	-	-	-	-	40	0	0	74	15	20.27027027	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.001589825	1.001589825	1	0	0	1	0	0	0	0	3	4.22E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216118105	4	109983715	A	C	COL25A1	CCDS43258.1	r.?	-	-	intronic	33	0	0	72	21	29.16666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.441176471	0.720588235	2	0	0.0175	0.9825	0	0	0	0	3	2.89E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216118675	4	114284153	A	C	ANK2	CCDS3702.1	r.?	-	-	intronic	46	0	0	77	15	19.48051948	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.962566845	0.962566845	1	0	0.0025	0.9975	0	0	0	0	3	8.05E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216118701	4	114455046	G	C	CAMK2D	CCDS3704.1	r.?	-	-	intronic	38	0	0	85	14	16.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.81384083	0.81384083	1	0	0.00375	0.99625	0	0	0	0	3	1.66E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216118704	4	114479847	T	C	CAMK2D	CCDS3704.1	r.?	-	-	intronic	29	0	0	54	14	25.92592593	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.281045752	1.281045752	1	0	0.00125	0.99875	0	0	0	0	3	1.64E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216119029	4	116993892	T	C	-	-	-	-	-	-	29	0	0	82	13	15.85365854	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.783357245	0.783357245	1	0	0.01375	0.98625	0	0	0	0	3	3.95E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216119410	4	119644382	T	C	SEC24D	CCDS3710.1	r.3626a>g	c.?	p.?	3'UTR variant	36	0	0	86	20	23.25581395	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.149110807	1.149110807	1	0	0	1	0	0	0	0	3	1.27E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216119489	4	120206962	T	C	USP53	CCDS43265.1	r.?	-	-	intronic	36	0	0	69	14	20.28985507	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	1.002557545	1.002557545	1	0	0.00125	0.99875	0	0	0	0	3	7.30E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216119521	4	120401086	G	C	-	-	-	-	-	-	38	0	0	84	17	20.23809524	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1	1	1	0	0	1	0	0	0	0	3	1.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216119576	4	120901849	A	C	-	-	-	-	-	-	28	0	0	72	15	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.00375	0.99625	0	0	0	0	3	2.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216119832	4	123011093	G	C	-	-	-	-	-	-	32	0	0	79	13	16.4556962	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.813104989	0.813104989	1	0.00125	0.00625	0.9925	0	0	0	0	3	2.37E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216119883	4	123408402	T	C	-	-	-	-	-	-	36	0	0	76	15	19.73684211	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0.00125	0.99875	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216119942	4	123946376	G	C	SPATA5	CCDS3730.1	r.?	-	-	intronic	29	0	0	69	12	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.01	0.99	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216120086	4	124920404	G	C	-	-	-	-	-	-	29	0	0	85	14	16.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.81384083	0.81384083	1	0	0.00625	0.99375	0	0	0	0	3	1.66E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216120110	4	125177374	T	C	-	-	-	-	-	-	31	0	0	75	13	17.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.856470588	0.856470588	1	0	0.0025	0.9975	0	0	0	0	3	1.16E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216120766	4	130955170	A	C	-	-	-	-	-	-	36	0	0	12	3	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0.00125	0.00875	0.99	0	0	0	0	3	2.66E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216120941	4	132291152	G	C	-	-	-	-	-	-	35	0	0	71	10	14.08450704	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.695940348	0.695940348	1	0.0025	0.03125	0.96625	0	0	0	0	3	3.42E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216121253	4	133346179	G	C	-	-	-	-	-	-	33	0	0	67	16	23.88059701	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.179982441	1.179982441	1	0	0	1	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216121440	4	134976964	G	C	-	-	-	-	-	-	35	0	0	90	16	17.77777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.878431373	0.878431373	1	0	0.00375	0.99625	0	0	0	0	3	2.31E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216121444	4	135002515	G	C	-	-	-	-	-	-	35	0	0	79	19	24.05063291	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.188384214	1.188384214	1	0	0	0.99875	0.00125	0	0	0	3	1.27E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216121621	4	136200910	A	C	-	-	-	-	-	-	33	0	0	71	11	15.49295775	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.765534383	0.765534383	1	0	0.015	0.985	0	0	0	0	3	9.49E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216121944	4	139215188	G	C	-	-	-	-	-	-	35	0	0	87	25	28.73563218	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.419878296	0.709939148	2	0	0.03125	0.96875	0	0	0	0	3	9.55E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216121969	4	139308526	A	C	-	-	-	-	-	-	33	0	0	78	17	21.79487179	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.076923077	1.076923077	1	0	0	1	0	0	0	0	3	3.59E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216122273	4	141361249	T	C	ENSG00000205301	ENST00000515354	r.?	-	-	downstream	38	0	0	66	17	25.75757576	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.272727273	1.272727273	1	0	0	1	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216122528	4	143523956	G	C	INPP4B	CCDS47112.1	r.?	-	-	intronic	35	0	0	83	14	16.86746988	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.833451453	0.833451453	1	0	0.00625	0.99375	0	0	0	0	3	1.17E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216122636	4	144511756	G	C	FREM3	ENST00000329798	r.?	-	-	intronic	33	0	0	63	14	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.0025	0.9975	0	0	0	0	3	1.81E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216122854	4	145426042	G	C	-	-	-	-	-	-	33	0	0	84	15	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.00625	0.99375	0	0	0	0	3	3.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216123164	4	147794773	T	C	TTC29	CCDS47141.1	r.?	-	-	intronic	25	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.00125	0.99875	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216123889	4	153759759	T	C	ARFIP1	CCDS34080.1	r.?	-	-	intronic	40	0	0	78	17	21.79487179	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.076923077	1.076923077	1	0	0.00125	0.99875	0	0	0	0	3	3.59E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216124166	4	155973368	A	C	-	-	-	-	-	-	45	0	0	91	14	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.01125	0.98875	0	0	0	0	3	4.55E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216124283	4	156907837	G	C	-	-	-	-	-	-	25	0	0	84	18	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	2.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216125104	4	162929163	T	C	FSTL5	CCDS3802.1	r.?	-	-	intronic	34	0	0	73	7	9.589041096	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.473811442	0.473811442	1	0.025	0.2875	0.6875	0	0	0	0	3	9.54E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216125475	4	165253565	G	C	Mar-01	CCDS45732.1	r.?	-	-	intronic	36	0	0	89	19	21.34831461	239	0	0	243	33	13.58024691							4	2	2	1	NA	NA	NA	unphased	1.054857898	1.054857898	1	0	0	1	0	0	0	0	3	1.55E-25	1	2.63E-36	1	YES	somatic	1_1
1353824	PD9772b	1216125945	4	168889776	G	C	-	-	-	-	-	-	37	0	0	45	13	28.88888889	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.138562092	1.138562092	1	0	0.0025	0.9975	0	0	0	0	3	7.68E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216126241	4	171250711	G	C	-	-	-	-	-	-	42	0	0	85	19	22.35294118	305	0	0	270	53	19.62962963							4	2	2	1	NA	NA	NA	unphased	1.10449827	1.10449827	1	0	0	1	0	0	0	0	3	5.93E-26	1	2.74E-66	1	YES	somatic	1_1
1353824	PD9772b	1216126326	4	172026270	G	C	-	-	-	-	-	-	36	0	0	68	10	14.70588235	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.726643599	0.726643599	1	0.00125	0.02	0.97875	0	0	0	0	3	2.18E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216126414	4	172789468	A	C	GALNTL6	CCDS34104.1	r.?	-	-	intronic	37	0	0	70	17	24.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.2	1.2	1	0	0	1	0	0	0	0	3	4.68E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216126504	4	173354879	T	C	GALNTL6	CCDS34104.1	r.?	-	-	intronic	34	0	0	89	19	21.34831461	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.054857898	1.054857898	1	0	0	1	0	0	0	0	3	1.55E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216126630	4	174345779	G	C	-	-	-	-	-	-	35	0	0	63	18	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0	1	0	0	0	0	3	7.98E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216126638	4	174421847	G	C	-	-	-	-	-	-	33	0	0	13	4	30.76923077	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.520361991	1.520361991	1	0	0.01125	0.98875	0	0	0	0	3	4.31E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216126755	4	175342790	T	C	-	-	-	-	-	-	33	0	0	89	13	14.60674157	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.721744878	0.721744878	1	0	0.02375	0.97625	0	0	0	0	3	1.21E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216126989	4	177040223	T	C	WDR17	CCDS43284.1	r.?	-	-	intronic	38	0	0	57	11	19.29824561	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.953560372	0.953560372	1	0	0.0025	0.9975	0	0	0	0	3	7.29E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216127009	4	177223960	T	C	-	-	-	-	-	-	41	0	0	83	13	15.6626506	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.773919206	0.773919206	1	0	0.0075	0.9925	0	0	0	0	3	4.66E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216127098	4	177834085	T	C	-	-	-	-	-	-	42	0	0	77	16	20.77922078	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.026737968	1.026737968	1	0	0.0025	0.9975	0	0	0	0	3	1.56E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216127336	4	179714972	T	C	-	-	-	-	-	-	36	0	0	77	20	25.97402597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.28342246	1.28342246	1	0	0	1	0	0	0	0	3	1.07E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216127341	4	179781730	T	C	-	-	-	-	-	-	34	0	0	53	13	24.52830189	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.211986681	1.211986681	1	0	0.00125	0.99875	0	0	0	0	3	8.53E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216127371	4	180147638	T	C	-	-	-	-	-	-	36	0	0	80	10	12.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.617647059	0.617647059	1	0	0.08375	0.91625	0	0	0	0	3	1.17E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216127378	4	180158516	G	C	-	-	-	-	-	-	36	0	0	71	24	33.8028169	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.670256835	0.835128418	2	0	0.0025	0.9975	0	0	0	0	3	2.52E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216127430	4	180564777	A	C	-	-	-	-	-	-	37	0	0	70	11	15.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.776470588	0.776470588	1	0	0.01375	0.98625	0	0	0	0	3	8.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216127567	4	181327053	A	C	-	-	-	-	-	-	35	0	0	72	13	18.05555556	295	0	0	91	8	8.791208791							4	2	2	1	NA	NA	NA	unphased	0.892156863	0.892156863	1	0	0.00625	0.99375	0	0	0	0	3	6.58E-17	1	2.30E-08	1	YES	somatic	1_1
1353824	PD9772b	1216127591	4	181519791	T	C	-	-	-	-	-	-	46	0	0	75	14	18.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0.00125	0.99875	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216127630	4	181730834	G	C	-	-	-	-	-	-	33	0	0	70	16	22.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.129411765	1.129411765	1	0	0.00125	0.99875	0	0	0	0	3	2.93E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216127870	4	183287615	T	C	ODZ3	CCDS47165.1	r.?	-	-	intronic	33	0	0	76	15	19.73684211	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0.00375	0.99625	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216128017	4	184441201	G	C	-	-	-	-	-	-	42	0	0	66	15	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0	1	0	0	0	0	3	6.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216128387	4	186800471	G	C	SORBS2	CCDS3845.1	r.?	-	-	intronic	16	0	0	57	6	10.52631579	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.520123839	0.520123839	1	0.00375	0.15875	0.8375	0	0	0	0	3	4.56E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216128746	4	188853099	T	C	-	-	-	-	-	-	43	0	0	75	12	16	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0	0.015	0.985	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216128838	4	189462701	T	C	-	-	-	-	-	-	31	0	0	49	6	12.24489796	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.605042017	0.605042017	1	0.0025	0.07125	0.92625	0	0	0	0	3	1.82E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216131842	5	293409	T	C	PDCD6	CCDS3854.1	r.?	-	-	intronic	22	0	0	15	3	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.0175	0.9825	0	0	0	0	3	5.44E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216132218	5	2325404	T	C	-	-	-	-	-	-	42	0	0	29	11	37.93103448	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.494929006	1.494929006	1	0	0	1	0	0	0	0	3	1.56E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216132417	5	3260502	G	C	-	-	-	-	-	-	32	0	0	114	21	18.42105263	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.726006192	0.726006192	1	0	0.0125	0.9875	0	0	0	0	3	1.32E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216132913	5	5128969	G	C	-	-	-	-	-	-	24	0	0	70	9	12.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.635294118	0.635294118	1	0.0025	0.06	0.9375	0	0	0	0	3	9.65E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216133402	5	8827630	G	C	-	-	-	-	-	-	40	0	0	75	13	17.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.856470588	0.856470588	1	0	0.00625	0.99375	0	0	0	0	3	1.16E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216133752	5	12049409	G	C	-	-	-	-	-	-	41	0	0	43	12	27.90697674	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.099863201	1.099863201	1	0	0.00125	0.99875	0	0	0	0	3	3.24E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216134028	5	14835802	A	C	ANKH	CCDS3885.1	r.?	-	-	intronic	27	0	0	58	18	31.03448276	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.223123732	1.223123732	1	0	0	1	0	0	0	0	3	1.42E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216134307	5	17690405	T	C	-	-	-	-	-	-	38	0	0	96	17	17.70833333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.875	0.875	1	0	0.00375	0.99625	0	0	0	0	3	1.64E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216134361	5	18023842	T	C	-	-	-	-	-	-	36	0	0	86	21	24.41860465	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.206566347	1.206566347	1	0	0	1	0	0	0	0	3	2.01E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216134553	5	19147352	T	C	-	-	-	-	-	-	27	0	0	86	16	18.60465116	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.919288646	0.919288646	1	0	0.00125	0.99875	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216134651	5	19824532	G	C	CDH18	CCDS3652.1	r.?	-	-	intronic	25	0	0	67	16	23.88059701	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.179982441	1.179982441	1	0	0	1	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216134656	5	19838974	A	C	CDH18	CCDS3652.1	r.1113u>g	c.122T>G	p.I41S	missense	33	0	0	82	24	29.26829268	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.446197991	0.723098996	2	0	0.0175	0.9825	0	0	0	0	3	1.47E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216134790	5	20849212	T	C	-	-	-	-	-	-	48	0	0	58	15	25.86206897	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.277890467	1.277890467	1	0	0	1	0	0	0	0	3	7.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216135272	5	23315470	G	C	-	-	-	-	-	-	41	0	0	88	15	17.04545455	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.842245989	0.842245989	1	0	0.00375	0.99625	0	0	0	0	3	6.87E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216135452	5	24665684	T	C	-	-	-	-	-	-	28	0	0	82	15	18.29268293	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.903873745	0.903873745	1	0	0.00875	0.99125	0	0	0	0	3	2.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216135590	5	25589880	A	C	-	-	-	-	-	-	32	0	0	84	18	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.00125	0.99875	0	0	0	0	3	2.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216135789	5	27337867	G	C	-	-	-	-	-	-	31	0	0	77	16	20.77922078	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.026737968	1.026737968	1	0	0.0025	0.9975	0	0	0	0	3	1.56E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216135936	5	28578049	G	C	-	-	-	-	-	-	37	0	0	72	13	18.05555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.892156863	0.892156863	1	0	0.00625	0.99375	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216136042	5	29204611	T	C	-	-	-	-	-	-	45	0	0	72	13	18.05555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.892156863	0.892156863	1	0	0.0025	0.9975	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216136489	5	31896324	G	C	PDZD2	CCDS34137.1	r.?	-	-	intronic	28	0	0	51	9	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.0075	0.9925	0	0	0	0	3	4.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216136861	5	34386196	T	C	-	-	-	-	-	-	30	0	0	67	14	20.89552239	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.032484636	1.032484636	1	0	0	1	0	0	0	0	3	4.66E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216137201	5	36814024	A	C	-	-	-	-	-	-	31	0	0	92	21	22.82608696	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.127877238	1.127877238	1	0	0	1	0	0	0	0	3	9.72E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216137743	5	40539828	T	C	-	-	-	-	-	-	29	0	0	45	10	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.0025	0.9975	0	0	0	0	3	2.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216137959	5	42653434	T	C	GHR	CCDS3940.1	r.?	-	-	intronic	29	0	0	67	18	26.86567164	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	2.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216138208	5	44950850	T	C	-	-	-	-	-	-	34	0	0	67	13	19.40298507	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.015	0.985	0	0	0	0	3	2.41E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216139466	5	50756039	A	C	-	-	-	-	-	-	45	0	0	56	12	21.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.844537815	0.844537815	1	0	0.005	0.995	0	0	0	0	3	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216139651	5	52264716	T	C	-	-	-	-	-	-	38	0	0	73	15	20.54794521	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.809830782	0.809830782	1	0	0.00375	0.99625	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216139752	5	53343151	T	C	-	-	-	-	-	-	34	0	0	67	23	34.32835821	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.352941176	1.352941176	1	0	0	1	0	0	0	0	3	5.12E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216140626	5	62501780	G	C	-	-	-	-	-	-	37	0	0	57	11	19.29824561	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.760577915	0.760577915	1	0	0.01875	0.98125	0	0	0	0	3	7.29E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216140777	5	64179526	G	C	CWC27	CCDS3982.2	r.?	-	-	intronic	24	0	0	58	17	29.31034483	0	0	NA	2	2	100							3	2	1	1	NA	NA	NA	unphased	1.155172414	1.155172414	1	0	0	1	0	0	0	0	3	1.24E-25	1	2.50E-05	1	NA	NA	NA
1353824	PD9772b	1216142899	5	84886707	A	C	-	-	-	-	-	-	31	0	0	57	7	12.28070175	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.484004128	0.484004128	1	0.02	0.2825	0.6975	0	0	0	0	3	1.66E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216142953	5	85382076	G	C	-	-	-	-	-	-	37	0	0	68	13	19.11764706	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.753460208	0.753460208	1	0	0.02125	0.97875	0	0	0	0	3	2.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216143116	5	87287577	G	C	-	-	-	-	-	-	40	0	0	48	12	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	1.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216143360	5	90194551	A	C	GPR98	CCDS47246.1	r.?	-	-	intronic	30	0	0	79	14	17.72151899	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.875651526	0.875651526	1	0	0.0075	0.9925	0	0	0	0	3	5.60E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216143458	5	90743319	G	C	-	-	-	-	-	-	38	0	0	80	30	37.5	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.852941176	0.926470588	2	0	0	1	0	0	0	0	3	6.48E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1216143761	5	94025952	G	C	ANKRD32	CCDS4071.2	r.?	-	-	intronic	31	0	0	74	24	32.43243243	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.278219396	1.278219396	1	0	0	1	0	0	0	0	3	8.21E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216143927	5	95931448	G	C	CAST	CCDS43257.1	r.?	-	-	intronic	43	0	0	54	13	24.07407407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.948801743	0.948801743	1	0	0.00125	0.99875	0	0	0	0	3	1.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216144573	5	101892270	T	C	-	-	-	-	-	-	45	0	0	67	12	17.91044776	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0	0.02125	0.97875	0	0	0	0	3	1.14E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216144858	5	104545406	A	C	-	-	-	-	-	-	30	0	0	51	19	37.25490196	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.46828143	0.734140715	2	0	0.01375	0.98625	0	0	0	0	3	7.94E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216144944	5	105634874	T	C	-	-	-	-	-	-	35	0	0	53	22	41.50943396	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.635960044	0.817980022	2	0	0.0025	0.9975	0	0	0	0	3	9.50E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216146024	5	116516536	G	C	-	-	-	-	-	-	47	0	0	65	21	32.30769231	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.273303167	1.273303167	1	0	0	1	0	0	0	0	3	2.35E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216147836	5	137018087	G	C	KLHL3	CCDS4192.1	r.?	-	-	intronic	31	0	0	65	11	16.92307692	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.666968326	0.666968326	1	0.00125	0.05125	0.9475	0	0	0	0	3	3.41E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216148117	5	140106940	T	C	-	-	-	-	-	-	29	0	0	34	5	14.70588235	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.579584775	0.579584775	1	0.005	0.09125	0.90375	0	0	0	0	3	7.71E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216149323	5	153601538	G	C	GALNT10	CCDS4325.1	r.?	-	-	intronic	47	0	0	65	22	33.84615385	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.333936652	1.333936652	1	0	0	0.99875	0	0.00125	0	0	3	2.36E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216149420	5	154774750	A	C	-	-	-	-	-	-	32	0	0	50	12	24	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.945882353	0.945882353	1	0	0.00125	0.99875	0	0	0	0	3	2.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216149493	5	155689144	G	C	-	-	-	-	-	-	27	0	0	63	13	20.63492063	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.813258637	0.813258637	1	0	0.01375	0.98625	0	0	0	0	3	1.01E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216149592	5	156769023	A	C	C5orf40	CCDS4337.1	r.1667u>g	c.?	p.?	3'UTR variant	37	0	0	53	14	26.41509434	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.041065483	1.041065483	1	0	0.0025	0.9975	0	0	0	0	3	1.22E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216149879	5	159503734	G	C	PWWP2A	CCDS47331.1	r.3168c>g	c.?	p.?	3'UTR variant	25	0	0	60	15	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216150036	5	161156627	G	C	-	-	-	-	-	-	39	0	0	68	14	20.58823529	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.811418685	0.811418685	1	0	0.01375	0.98625	0	0	0	0	3	5.84E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216150572	5	166359996	G	C	-	-	-	-	-	-	38	0	0	42	12	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	2.35E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216151097	5	171918193	T	C	-	-	-	-	-	-	31	0	0	17	7	41.17647059	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.62283737	1.62283737	1	0	0.0025	0.9975	0	0	0	0	3	1.45E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216151202	5	172866849	T	C	-	-	-	-	-	-	43	0	0	42	11	26.19047619	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.032212885	1.032212885	1	0	0.0025	0.9975	0	0	0	0	3	1.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216151365	5	174714920	G	C	-	-	-	-	-	-	19	0	0	15	4	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.01375	0.98625	0	0	0	0	3	8.16E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216151367	5	174735687	G	C	-	-	-	-	-	-	41	0	0	70	22	31.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.238655462	1.238655462	1	0	0	1	0	0	0	0	3	1.63E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216151642	5	177320685	T	C	-	-	-	-	-	-	44	0	0	60	16	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.00125	0.99875	0	0	0	0	3	1.86E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216151797	5	179283519	G	C	C5orf45	CCDS34319.1	r.?	-	-	intronic	37	0	0	23	3	13.04347826	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.514066496	0.514066496	1	0.01125	0.08125	0.9075	0	0	0	0	3	0.000205387	1	1	1	NA	NA	NA
1353824	PD9772b	1216152317	6	2406932	T	C	AL031768.1	ENST00000505870	r.?	-	-	intronic	33	0	0	63	23	36.50793651	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.803921569	0.901960784	2	0	0	1	0	0	0	0	3	9.25E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216152448	6	3429632	T	C	SLC22A23	CCDS47363.1	r.?	-	-	intronic	30	0	0	80	18	22.5	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.111764706	1.111764706	1	0	0	1	0	0	0	0	3	1.01E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216152920	6	6638444	G	C	LY86	CCDS4498.1	r.?	-	-	intronic	40	0	0	85	5	5.882352941	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.290657439	0.290657439	1	0.22625	0.66625	0.1075	0	0	0	0	2	7.35E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216152927	6	6663296	G	C	-	-	-	-	-	-	31	0	0	35	14	40	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.976470588	0.988235294	2	0	0.00125	0.99875	0	0	0	0	3	1.28E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216153076	6	7640879	T	C	-	-	-	-	-	-	43	0	0	54	5	9.259259259	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.45751634	0.45751634	1	0.01875	0.20125	0.78	0	0	0	0	3	8.06E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216153800	6	12338079	T	C	-	-	-	-	-	-	37	0	0	37	5	13.51351351	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.66772655	0.66772655	1	0.00125	0.05375	0.945	0	0	0	0	3	1.19E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216154059	6	14102349	T	C	-	-	-	-	-	-	35	0	0	64	15	23.4375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.923713235	0.923713235	1	0	0	1	0	0	0	0	3	3.87E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216154885	6	22196466	G	C	-	-	-	-	-	-	27	0	0	66	15	22.72727273	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.895721925	0.895721925	1	0	0.0025	0.9975	0	0	0	0	3	6.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216155558	6	28198980	T	C	ZNF193	CCDS4646.1	r.?	-	-	intronic	33	0	0	59	9	15.25423729	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.601196411	0.601196411	1	0	0.12	0.88	0	0	0	0	3	1.96E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216156902	6	37009124	G	C	COX6A1P2	ENST00000423336	r.?	-	-	upstream	32	0	0	53	21	39.62264151	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.957824639	0.97891232	2	0	0	1	0	0	0	0	3	1.30E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216156949	6	37374324	G	C	-	-	-	-	-	-	22	0	0	56	10	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.00625	0.99375	0	0	0	0	3	2.82E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216156964	6	37489869	G	C	ENSG00000204110	ENST00000373404	r.?	-	-	intronic	39	0	0	39	6	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0.00125	0.025	0.97375	0	0	0	0	3	4.43E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216156970	6	37588778	T	C	-	-	-	-	-	-	44	0	0	68	20	29.41176471	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.453287197	0.726643599	2	0	0.0225	0.9775	0	0	0	0	3	6.23E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216157365	6	41081103	G	C	-	-	-	-	-	-	34	0	0	74	17	22.97297297	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.135135135	1.135135135	1	0	0	1	0	0	0	0	3	1.34E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216157463	6	42086540	G	C	C6orf132	CCDS47428.1	r.?	-	-	intronic	34	0	0	18	6	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	1.647058824	1	0	0.0025	0.9975	0	0	0	0	3	2.75E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216157481	6	42250440	A	C	TRERF1	CCDS4867.1	r.?	-	-	intronic	37	0	0	69	11	15.94202899	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.787723785	0.787723785	1	0	0.01375	0.98625	0	0	0	0	3	6.82E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216157494	6	42323610	T	C	TRERF1	CCDS4867.1	r.?	-	-	intronic	43	0	0	96	19	19.79166667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.977941176	0.977941176	1	0	0.0025	0.9975	0	0	0	0	3	7.42E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216157659	6	43524102	A	C	XPO5	CCDS47430.1	r.?	-	-	intronic	26	0	0	74	30	40.54054054	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.00317965	1.001589825	2	0	0	1	0	0	0	0	3	3.53E-49	1	1	1	NA	NA	NA
1353824	PD9772b	1216157901	6	45149483	T	C	SUPT3H	CCDS34466.1	r.?	-	-	intronic	22	0	0	48	10	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.005	0.995	0	0	0	0	3	5.37E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216158066	6	46275232	A	C	RCAN2	CCDS43469.1	r.?	-	-	intronic	35	0	0	80	13	16.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.802941176	0.802941176	1	0	0.01125	0.98875	0	0	0	0	3	2.82E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216158273	6	47818338	T	C	-	-	-	-	-	-	34	0	0	67	13	19.40298507	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.958735733	0.958735733	1	0	0.00125	0.99875	0	0	0	0	3	2.41E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216158316	6	48330423	A	C	-	-	-	-	-	-	35	0	0	81	14	17.28395062	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.854030501	0.854030501	1	0	0.00375	0.99625	0	0	0	0	3	8.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216158404	6	49023725	G	C	-	-	-	-	-	-	43	0	0	77	13	16.88311688	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.834224599	0.834224599	1	0	0.00375	0.99625	0	0	0	0	3	1.67E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216158410	6	49110157	G	C	-	-	-	-	-	-	47	0	0	64	12	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.00375	0.99625	0	0	0	0	3	6.30E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216158431	6	49331770	G	C	-	-	-	-	-	-	36	0	0	68	15	22.05882353	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.089965398	1.089965398	1	0	0	1	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216158646	6	51125167	T	C	-	-	-	-	-	-	41	0	0	80	10	12.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.617647059	0.617647059	1	0.005	0.0875	0.9075	0	0	0	0	3	1.17E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216159111	6	54842817	G	C	-	-	-	-	-	-	47	0	0	82	19	23.17073171	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.144906743	1.144906743	1	0	0	1	0	0	0	0	3	2.79E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216159431	6	57092996	G	C	-	-	-	-	-	-	40	0	0	68	12	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.00375	0.99625	0	0	0	0	3	1.37E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216160466	6	62271446	A	C	-	-	-	-	-	-	25	0	0	73	19	26.02739726	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.286059629	1.286059629	1	0	0	1	0	0	0	0	3	2.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216160581	6	63166286	A	C	-	-	-	-	-	-	40	0	0	75	15	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.0025	0.9975	0	0	0	0	3	5.25E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216160617	6	63458501	A	C	-	-	-	-	-	-	33	0	0	82	13	15.85365854	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.783357245	0.783357245	1	0	0.0125	0.9875	0	0	0	0	3	3.95E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216160692	6	64097808	T	C	-	-	-	-	-	-	36	0	0	61	13	21.31147541	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.053037608	1.053037608	1	0	0	1	0	0	0	0	3	6.41E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216160812	6	65027865	G	C	EYS	CCDS47445.1	r.?	-	-	intronic	25	0	0	79	11	13.92405063	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.688011914	0.688011914	1	0	0.04125	0.95875	0	0	0	0	3	3.23E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216160813	6	65028454	G	C	EYS	CCDS47445.1	r.?	-	-	intronic	44	0	0	105	20	19.04761905	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.00125	0.99875	0	0	0	0	3	1.00E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216160814	6	65028481	G	C	EYS	CCDS47445.1	r.?	-	-	intronic	44	0	0	109	21	19.26605505	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.951969779	0.951969779	1	0	0	1	0	0	0	0	3	4.77E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216160815	6	65028639	G	C	EYS	CCDS47445.1	r.?	-	-	intronic	38	0	0	97	15	15.46391753	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.764099454	0.764099454	1	0	0.01875	0.98125	0	0	0	0	3	3.21E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216161036	6	66539515	T	C	-	-	-	-	-	-	39	0	0	82	15	18.29268293	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.903873745	0.903873745	1	0	0.00375	0.99625	0	0	0	0	3	2.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216161108	6	67102111	A	C	-	-	-	-	-	-	37	0	0	99	12	12.12121212	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.598930481	0.598930481	1	0.0025	0.11875	0.87875	0	0	0	0	3	1.51E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216161328	6	68520676	T	C	-	-	-	-	-	-	35	0	0	77	18	23.37662338	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.155080214	1.155080214	1	0	0	1	0	0	0	0	3	4.71E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216161442	6	69312930	A	C	-	-	-	-	-	-	36	0	0	76	13	17.10526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.845201238	0.845201238	1	0	0.005	0.995	0	0	0	0	3	1.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216161706	6	71178799	T	C	FAM135A	CCDS34481.1	r.?	-	-	intronic	44	0	0	98	27	27.55102041	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.361344538	0.680672269	2	0	0.075	0.925	0	0	0	0	3	5.38E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216162021	6	73763911	T	C	KCNQ5	CCDS4976.1	r.?	-	-	intronic	37	0	0	101	14	13.86138614	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.68491555	0.68491555	1	0	0.0425	0.9575	0	0	0	0	3	2.08E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216162491	6	77123994	A	C	-	-	-	-	-	-	31	0	0	49	15	30.6122449	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.206482593	1.206482593	1	0	0	1	0	0	0	0	3	4.10E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216163344	6	85653343	T	C	-	-	-	-	-	-	35	0	0	55	12	21.81818182	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.859893048	0.859893048	1	0	0.0025	0.9975	0	0	0	0	3	8.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216163850	6	90684198	G	C	BACH2	CCDS5026.1	r.?	-	-	intronic	32	0	0	66	16	24.24242424	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.95543672	0.95543672	1	0	0	1	0	0	0	0	3	1.03E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216163966	6	91948414	A	C	-	-	-	-	-	-	46	0	0	55	13	23.63636364	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.931550802	0.931550802	1	0	0.005	0.995	0	0	0	0	3	1.46E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216164217	6	94625279	T	C	-	-	-	-	-	-	38	0	0	64	10	15.625	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.615808824	0.615808824	1	0.00125	0.0675	0.93125	0	0	0	0	3	1.16E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216164225	6	94764266	T	C	-	-	-	-	-	-	37	0	0	57	12	21.05263158	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.829721362	0.829721362	1	0	0.00625	0.99375	0	0	0	0	3	1.40E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216164400	6	96618658	G	C	FUT9	CCDS5033.1	r.?	-	-	intronic	27	0	0	63	17	26.98412698	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.063492063	1.063492063	1	0	0	1	0	0	0	0	3	6.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216164430	6	96997878	T	C	KIAA0776	CCDS5034.1	r.?	-	-	intronic	33	0	0	67	12	17.91044776	149	0	0	392	51	13.01020408							3	2	1	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.035	0.96375	0	0	0	0	3	1.14E-15	1	3.23E-54	1	YES	somatic	1_1
1353824	PD9772b	1216164536	6	98063370	T	C	-	-	-	-	-	-	36	0	0	58	20	34.48275862	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.359026369	1.359026369	1	0	0	1	0	0	0	0	3	1.47E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216164802	6	100646734	T	C	-	-	-	-	-	-	35	0	0	49	10	20.40816327	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.804321729	0.804321729	1	0	0.005	0.995	0	0	0	0	3	6.72E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216164841	6	101080914	G	C	ASCC3	CCDS5046.1	r.?	-	-	intronic	37	0	0	54	11	20.37037037	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.802832244	0.802832244	1	0	0.0125	0.9875	0	0	0	0	3	3.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216165052	6	102868745	T	C	-	-	-	-	-	-	44	0	0	56	17	30.35714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.196428571	1.196428571	1	0	0	1	0	0	0	0	3	6.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216165053	6	102871420	A	C	-	-	-	-	-	-	37	0	0	86	25	29.06976744	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.145690834	1.145690834	1	0	0	1	0	0	0	0	3	6.84E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216165164	6	104047293	T	C	-	-	-	-	-	-	25	0	0	54	18	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	3.12E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216165539	6	107658734	G	C	PDSS2	CCDS5059.1	r.?	-	-	intronic	26	0	0	52	19	36.53846154	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.440045249	0.720022624	2	0	0.03125	0.96875	0	0	0	0	3	1.24E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216165730	6	109715369	T	C	PPIL6	CCDS47466.1	r.?	-	-	intronic	32	0	0	44	12	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0.0025	0.9975	0	0	0	0	3	4.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216165831	6	110845250	T	C	-	-	-	-	-	-	32	0	0	60	13	21.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.853921569	0.853921569	1	0	0.00375	0.99625	0	0	0	0	3	5.07E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216165917	6	111640686	G	C	REV3L	CCDS5091.2	r.?	-	-	intronic	30	0	0	36	11	30.55555556	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.204248366	1.204248366	1	0	0.00125	0.99875	0	0	0	0	3	2.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216165929	6	111780494	T	C	REV3L	CCDS5091.2	r.?	-	-	intronic	36	0	0	72	20	27.77777778	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.094771242	1.094771242	1	0	0	1	0	0	0	0	3	2.32E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216166025	6	112442821	T	C	LAMA4	CCDS34514.1	r.?	-	-	intronic	30	0	0	65	11	16.92307692	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.666968326	0.666968326	1	0.00125	0.05	0.94875	0	0	0	0	3	3.41E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216166253	6	114454552	T	C	-	-	-	-	-	-	47	0	0	54	14	25.92592593	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.021786492	1.021786492	1	0	0.00375	0.99625	0	0	0	0	3	1.64E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216166406	6	115833691	G	C	-	-	-	-	-	-	41	0	0	88	31	35.22727273	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.77790452	0.93859368	1.894221704	0	0	1	0	0	0	0	3	1.97E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1216166549	6	117141290	T	C	GPRC6A	CCDS5112.1	r.?	-	-	intronic	17	0	0	29	6	20.68965517	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.044197538	1.044197538	1	0	0.00625	0.99375	0	0	0	0	3	6.72E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216166823	6	118963549	G	C	C6orf204	CCDS43498.1	r.?	-	-	intronic	39	0	0	65	11	16.92307692	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	0.854100037	0.854100037	1	0	0.00375	0.99625	0	0	0	0	3	3.41E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216166973	6	120271544	T	C	-	-	-	-	-	-	31	0	0	73	20	27.39726027	212	0	0	489	121	24.74437628							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.382727333	1.382727333	1	0	0	1	0	0	0	0	3	3.18E-29	1	1.68E-162	1	YES	somatic	1_1
1353824	PD9772b	1216166992	6	120505115	T	C	-	-	-	-	-	-	36	0	0	83	30	36.14457831	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.824200518	0.963034324	1.894221704	0	0	1	0	0	0	0	3	2.51E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1216167298	6	122994214	G	C	PKIB	CCDS5126.1	r.?	-	-	intronic	44	0	0	76	25	32.89473684	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.660182489	0.876445711	1.894221704	0	0	1	0	0	0	0	3	1.83E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1216167602	6	125134865	T	C	NKAIN2	CCDS34526.1	r.?	-	-	intronic	40	0	0	70	16	22.85714286	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.153589661	1.153589661	1	0	0	1	0	0	0	0	3	2.93E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216167692	6	126021685	T	C	-	-	-	-	-	-	36	0	0	65	21	32.30769231	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.630554617	0.860804526	1.894221704	0	0.00375	0.99625	0	0	0	0	3	2.35E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216168206	6	130422761	G	C	L3MBTL3	CCDS34537.1	r.?	-	-	intronic	34	0	0	22	7	31.81818182	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.605849244	1.605849244	1	0	0.00375	0.99625	0	0	0	0	3	1.25E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216168227	6	130539035	G	C	SAMD3	CCDS34539.1	r.?	-	-	intronic	40	0	0	71	24	33.8028169	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.706012879	0.900640551	1.894221704	0	0	1	0	0	0	0	3	2.52E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216168232	6	130605425	A	C	SAMD3	ENST00000368134	r.?	-	-	intronic	39	0	0	76	21	27.63157895	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.394553291	1.394553291	1	0	0	1	0	0	0	0	3	1.07E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216168639	6	133773285	T	C	EYA4	CCDS5166.1	r.?	-	-	intronic	36	0	0	95	20	21.05263158	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.062516793	1.062516793	1	0	0	1	0	0	0	0	3	1.14E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216169022	6	136967435	T	C	MAP3K5	CCDS5179.1	r.?	-	-	intronic	35	0	0	66	23	34.84848485	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.758787267	0.928501275	1.894221704	0	0.00125	0.99875	0	0	0	0	3	3.38E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216169615	6	141525879	T	C	-	-	-	-	-	-	35	0	0	100	22	22	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.107471677	1.107471677	1	0	0	1	0	0	0	0	3	1.20E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216169808	6	143053189	G	C	-	-	-	-	-	-	27	0	0	79	10	12.65822785	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	0.637210401	0.637210401	1	0	0.07375	0.92625	0	0	0	0	3	1.03E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216169887	6	143849209	T	C	-	-	-	-	-	-	34	0	0	70	25	35.71428571	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.797843631	0.94265423	1.907214303	0	0	1	0	0	0	0	3	1.55E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216170028	6	144944294	G	C	UTRN	CCDS34547.1	r.?	-	-	intronic	40	0	0	72	10	13.88888889	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	0.699161412	0.699161412	1	0	0.0375	0.9625	0	0	0	0	3	3.95E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216170259	6	146586102	T	C	GRM1	CCDS47497.1	r.?	-	-	intronic	44	0	0	95	34	35.78947368	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.801628565	0.944638766	1.907214303	0	0	1	0	0	0	0	3	2.98E-53	1	1	1	NA	NA	NA
1353824	PD9772b	1216170271	6	146724299	A	C	GRM1	CCDS47497.1	r.?	-	-	intronic	37	0	0	86	34	39.53488372	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.990171089	0.995085545	2	0	0	1	0	0	0	0	3	4.60E-55	1	1	1	NA	NA	NA
1353824	PD9772b	1216170558	6	149003966	T	C	-	-	-	-	-	-	33	0	0	56	16	28.57142857	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.438274905	1.438274905	1	0	0	1	0	0	0	0	3	5.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216170606	6	149547392	G	C	-	-	-	-	-	-	26	0	0	62	13	20.96774194	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.055508196	1.055508196	1	0	0.00125	0.99875	0	0	0	0	3	8.08E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216170934	6	151968063	T	C	-	-	-	-	-	-	32	0	0	88	34	38.63636364	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.944939928	1.019780486	1.907214303	0	0	1	0	0	0	0	3	1.22E-54	1	1	1	NA	NA	NA
1353824	PD9772b	1216170966	6	152194729	T	C	ESR1	CCDS5234.1	r.?	-	-	intronic	41	0	0	88	34	38.63636364	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.944939928	1.019780486	1.907214303	0	0	1	0	0	0	0	3	1.22E-54	1	1	1	NA	NA	NA
1353824	PD9772b	1216170983	6	152380241	G	C	ESR1	CCDS5234.1	r.?	-	-	intronic	35	0	0	84	35	41.66666667	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	2.097484236	1.048742118	2	0	0	1	0	0	0	0	3	1.21E-57	1	1	1	NA	NA	NA
1353824	PD9772b	1216171388	6	154903842	G	C	-	-	-	-	-	-	42	0	0	87	11	12.64367816	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.722276558	0.936350076	0.771374485	0	0.00375	0.99625	0	0	0	0	3	9.65E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216172069	6	158962018	T	C	TMEM181	CCDS43520.1	r.?	-	-	intronic	38	0	0	20	8	40	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	2.285020382	1.142510191	2	0	0.00375	0.99625	0	0	0	0	3	4.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216172434	6	161133180	G	C	PLG	CCDS5279.1	r.?	-	-	intronic	29	0	0	84	11	13.0952381	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.748072149	0.969791151	0.771374485	0	0.00625	0.99375	0	0	0	0	3	6.49E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216172971	6	164721823	T	C	-	-	-	-	-	-	42	0	0	78	14	17.94871795	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.5435407	0.5435407	1	0.00875	0.42875	0.5625	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216173136	6	166212471	T	C	-	-	-	-	-	-	43	0	0	57	9	15.78947368	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.478152345	0.478152345	1	0.02375	0.495	0.48125	0	0	0	0	2	1.42E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216173241	6	166924940	T	C	RPS6KA2	CCDS5294.1	r.?	-	-	intronic	44	0	0	107	25	23.36448598	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.707546305	0.707546305	1	0	0.02875	0.97125	0	0	0	0	3	3.34E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216173279	6	167309806	T	C	ENSG00000249141	ENST00000507747	r.?	-	-	intronic	35	0	0	94	14	14.89361702	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.451023134	0.451023134	1	0.05	0.855	0.095	0	0	0	0	2	7.32E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216173297	6	167431863	G	C	FGFR1OP	CCDS5296.1	r.?	-	-	intronic	39	0	0	40	11	27.5	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.832782001	0.832782001	1	0	0.01375	0.98625	0	0	0	0	3	9.88E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216173581	6	169833012	A	C	-	-	-	-	-	-	31	0	0	61	11	18.03278689	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.546086558	0.546086558	1	0.01125	0.31375	0.675	0	0	0	0	3	1.62E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216174125	7	3775555	T	C	SDK1	CCDS34590.1	r.?	-	-	intronic	29	0	0	85	17	20	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.588235294	0.588235294	1	0	0.32375	0.67625	0	0	0	0	3	1.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216174212	7	4561290	T	C	-	-	-	-	-	-	45	0	0	65	16	24.61538462	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.7239819	0.7239819	1	0	0.03375	0.96625	0	0	0	0	3	7.85E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216174630	7	7893471	T	C	ENSG00000219545	ENST00000406829	r.?	-	-	intronic	37	0	0	87	15	17.24137931	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.507099391	0.507099391	1	0.01875	0.69	0.29125	0	0	0	0	2	5.73E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216174674	7	8308762	G	C	-	-	-	-	-	-	36	0	0	68	19	27.94117647	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.821799308	0.821799308	1	0	0.00375	0.99625	0	0	0	0	3	5.06E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216174727	7	8926803	T	C	-	-	-	-	-	-	35	0	0	79	19	24.05063291	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.707371556	0.707371556	1	0	0.035	0.965	0	0	0	0	3	1.27E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216174774	7	9314121	A	C	-	-	-	-	-	-	37	0	0	86	12	13.95348837	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.410396717	0.410396717	1	0.08	0.86625	0.05375	0	0	0	0	2	2.65E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216174840	7	9915070	T	C	-	-	-	-	-	-	38	0	0	90	13	14.44444444	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.424836601	0.424836601	1	0.0675	0.86375	0.06875	0	0	0	0	2	1.40E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216174907	7	10471756	G	C	-	-	-	-	-	-	37	0	0	75	16	21.33333333	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.62745098	0.62745098	1	0.00125	0.1475	0.85125	0	0	0	0	3	9.88E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216174956	7	10890309	G	C	-	-	-	-	-	-	34	0	0	60	17	28.33333333	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.833333333	0.833333333	1	0	0.00875	0.99125	0	0	0	0	3	2.41E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216175209	7	12755927	G	C	-	-	-	-	-	-	35	0	0	61	11	18.03278689	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.530376085	0.530376085	1	0.01125	0.38	0.60875	0	0	0	0	3	1.62E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216175614	7	17208248	G	C	-	-	-	-	-	-	54	0	0	59	9	15.25423729	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.601196411	0.601196411	1	0.0075	0.09375	0.89875	0	0	0	0	3	1.96E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216176681	7	28525505	G	C	CREB5	CCDS5417.1	r.?	-	-	intronic	48	0	0	51	13	25.49019608	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.00461361	1.00461361	1	0	0.00125	0.99875	0	0	0	0	3	4.87E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216177125	7	32804949	G	C	AVL9	ENST00000404479	r.?	-	-	intronic	36	0	0	76	16	21.05263158	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.829721362	0.829721362	1	0	0.00875	0.99125	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216177520	7	36626132	T	C	AOAH	CCDS5448.1	r.?	-	-	intronic	32	0	0	66	16	24.24242424	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.95543672	0.95543672	1	0	0.00125	0.99875	0	0	0	0	3	1.03E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216177744	7	39034041	G	C	POU6F2	ENST00000403058	r.?	-	-	intronic	42	0	0	49	8	16.32653061	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.643457383	0.643457383	1	0.0025	0.055	0.9425	0	0	0	0	3	1.47E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216177780	7	39543671	A	C	-	-	-	-	-	-	39	0	0	47	13	27.65957447	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.090112641	1.090112641	1	0	0	1	0	0	0	0	3	1.47E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216178158	7	43518357	T	C	HECW1	CCDS5469.2	r.?	-	-	intronic	47	0	0	59	10	16.94915254	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.667996012	0.667996012	1	0	0.04125	0.95875	0	0	0	0	3	4.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216178159	7	43561157	A	C	HECW1	CCDS5469.2	r.?	-	-	intronic	41	0	0	57	6	10.52631579	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.414860681	0.414860681	1	0.05	0.4175	0.5325	0	0	0	0	3	4.56E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216178318	7	45364637	A	C	-	-	-	-	-	-	38	0	0	59	15	25.42372881	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.001994018	1.001994018	1	0	0	1	0	0	0	0	3	9.90E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216178593	7	48944969	G	C	-	-	-	-	-	-	34	0	0	37	8	21.62162162	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.852146264	0.852146264	1	0	0.015	0.985	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216178780	7	50972636	G	C	-	-	-	-	-	-	30	0	0	79	13	16.4556962	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.648548027	0.648548027	1	0	0.0875	0.9125	0	0	0	0	3	2.37E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216178925	7	52342371	G	C	-	-	-	-	-	-	33	0	0	15	4	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.01375	0.98625	0	0	0	0	3	8.16E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216179326	7	54232452	T	C	-	-	-	-	-	-	24	0	0	52	6	11.53846154	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.454751131	0.454751131	1	0.03875	0.27875	0.6825	0	0	0	0	3	2.61E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216179334	7	54314432	A	C	-	-	-	-	-	-	40	0	0	51	11	21.56862745	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.85005767	0.85005767	1	0	0.0075	0.9925	0	0	0	0	3	1.94E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216179744	7	57326036	G	C	-	-	-	-	-	-	32	0	0	44	8	18.18181818	0	0	NA	0	0	NA							3.20903053	2	1	0.79096947	2	2	0.20903053	unphased	0.754583091	0.754583091	1	0	0.0225	0.9775	0	0	0	0	3	5.90E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216186299	7	67083380	T	C	-	-	-	-	-	-	39	0	0	67	9	13.43283582	137	0	0	187	34	18.18181818							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	0.649866136	0.724718002	0.896715873	0	0.0175	0.9825	0	0	0	0	3	6.43E-11	1	6.69E-42	1	YES	somatic	1_1
1353824	PD9772b	1216186884	7	70448138	G	C	-	-	-	-	-	-	45	0	0	56	8	14.28571429	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.848739496	0.848739496	1	0	0.0125	0.9875	0	0	0	0	3	4.48E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216187004	7	71141090	T	C	WBSCR17	CCDS5540.1	r.?	-	-	intronic	37	0	0	47	12	25.53191489	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.261576971	1.261576971	1	0	0	1	0	0	0	0	3	1.09E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216187478	7	73794727	A	C	CLIP2	CCDS5569.1	r.?	-	-	intronic	28	0	0	35	7	20	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00625	0.99375	0	0	0	0	3	4.65E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216187539	7	74164524	T	C	GTF2I	CCDS5573.1	r.?	-	-	intronic	5	0	0	17	4	23.52941176	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0.0175	0.9825	0	0	0	0	3	1.41E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216187714	7	76014007	A	C	SRCRB4D	CCDS5585.1	r.?	-	-	downstream	27	0	0	37	8	21.62162162	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06836248	1.06836248	1	0	0.00625	0.99375	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216187738	7	76111853	G	C	DTX2	CCDS5587.1	r.807g>c	c.297G>C	p.L99L	silent	32	0	0	17	5	29.41176471	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.453287197	1.453287197	1	0	0.00625	0.99375	0	0	0	0	3	1.84E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216187891	7	77022446	T	C	PION	CCDS34672.2	r.?	-	-	intronic	36	0	0	75	19	25.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.251764706	1.251764706	1	0	0	1	0	0	0	0	3	4.19E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216188058	7	78198960	T	C	MAGI2	CCDS5594.1	r.?	-	-	intronic	43	0	0	70	17	24.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.2	1.2	1	0	0.00125	0.99875	0	0	0	0	3	4.68E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216188092	7	78388331	T	C	MAGI2	CCDS5594.1	r.?	-	-	intronic	42	0	0	66	11	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0.00125	0.00875	0.99	0	0	0	0	3	4.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216188239	7	79637992	A	C	-	-	-	-	-	-	44	0	0	86	17	19.76744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976744186	0.976744186	1	0	0.00375	0.99625	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216188379	7	80952373	G	C	-	-	-	-	-	-	49	0	0	81	16	19.75308642	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976034858	0.976034858	1	0	0.00375	0.99625	0	0	0	0	3	3.77E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216188519	7	82330903	A	C	-	-	-	-	-	-	47	0	0	74	16	21.62162162	106	0	0	117	10	8.547008547							4	2	2	1	NA	NA	NA	unphased	1.06836248	1.06836248	1	0	0.00125	0.99875	0	0	0	0	3	7.81E-22	1	5.36E-10	1	YES	somatic	1_1
1353824	PD9772b	1216188701	7	83507807	T	C	-	-	-	-	-	-	37	0	0	70	13	18.57142857	235	0	0	361	47	13.01939058							4	2	2	1	NA	NA	NA	unphased	0.917647059	0.917647059	1	0	0.00125	0.99875	0	0	0	0	3	4.44E-17	1	4.10E-50	1	YES	somatic	1_1
1353824	PD9772b	1216188718	7	83602716	A	C	SEMA3A	CCDS5599.1	r.?	-	-	intronic	41	0	0	74	12	16.21621622	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.80127186	0.80127186	1	0	0.01375	0.98625	0	0	0	0	3	4.02E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216189044	7	85971590	G	C	-	-	-	-	-	-	32	0	0	73	15	20.54794521	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.015310234	1.015310234	1	0	0	1	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216189242	7	87638560	T	C	ADAM22	CCDS43609.1	r.?	-	-	intronic	27	0	0	62	14	22.58064516	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.115749526	1.115749526	1	0	0	1	0	0	0	0	3	1.42E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216189441	7	89413513	G	C	-	-	-	-	-	-	36	0	0	99	23	23.23232323	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.147950089	1.147950089	1	0	0	1	0	0	0	0	3	1.58E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216189598	7	90301914	G	C	CDK14	ENST00000380050	r.?	-	-	intronic	35	0	0	59	12	20.33898305	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.004985045	1.004985045	1	0	0.00125	0.99875	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216189612	7	90384689	A	C	CDK14	CCDS5619.1	r.?	-	-	intronic	26	0	0	78	11	14.1025641	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.696832579	0.696832579	1	0.00125	0.03875	0.96	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216189671	7	90861884	G	C	-	-	-	-	-	-	29	0	0	68	17	25	177	0	0	126	15	11.9047619							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	2.69E-24	1	1.87E-16	1	YES	somatic	1_1
1353824	PD9772b	1216189694	7	91014702	T	C	-	-	-	-	-	-	32	0	0	80	15	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.00375	0.99625	0	0	0	0	3	1.49E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216189910	7	92924681	T	C	CCDC132	CCDS43617.1	r.?	-	-	intronic	33	0	0	61	14	22.95081967	0	0	NA	2	2	100							3	2	1	1	NA	NA	NA	unphased	0.904532305	0.904532305	1	0	0.005	0.995	0	0	0	0	3	1.10E-19	1	2.50E-05	1	NA	NA	NA
1353824	PD9772b	1216189960	7	93480872	G	C	GNGT1	ENST00000455502	r.?	-	-	intronic	42	0	0	72	12	16.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.656862745	0.656862745	1	0	0.05625	0.94375	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216190125	7	95530375	T	C	DYNC1I1	CCDS5644.1	r.?	-	-	intronic	42	0	0	53	11	20.75471698	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.817980022	0.817980022	1	0	0.015	0.985	0	0	0	0	3	3.07E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216190195	7	96608224	G	C	-	-	-	-	-	-	42	0	0	57	11	19.29824561	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.760577915	0.760577915	1	0	0.01625	0.98375	0	0	0	0	3	7.29E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216190481	7	99221319	G	C	ZNF498	CCDS5671.2	r.?	-	-	intronic	44	0	0	63	15	23.80952381	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.93837535	0.93837535	1	0	0.00375	0.99625	0	0	0	0	3	2.97E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216190575	7	99945453	G	C	PILRB	CCDS43622.1	r.?	-	-	intronic	25	0	0	57	11	19.29824561	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.953560372	0.953560372	1	0	0.00375	0.99625	0	0	0	0	3	7.29E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216190874	7	102389968	T	C	FAM185A	CCDS47676.1	r.314u>c	c.314T>C	p.V105A	missense	34	0	0	6	4	66.66666667	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	3.294117647	1.098039216	3	0.00125	0.00625	0.9925	0	0	0	0	3	9.30E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216191052	7	103458680	A	C	RELN	CCDS47680.1	r.?	-	-	intronic	43	0	0	66	32	48.48484848	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.395721925	1.197860963	2	0	0	1	0	0	0	0	3	1.38E-55	1	1	1	NA	NA	NA
1353824	PD9772b	1216191606	7	107120992	A	C	COG5	CCDS5743.1	r.?	-	-	intronic	48	0	0	68	36	52.94117647	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.615916955	0.871972318	3	0	0	1	0	0	0	0	3	3.15E-64	1	1	1	NA	NA	NA
1353824	PD9772b	1216191759	7	108058175	T	C	NRCAM	CCDS47686.1	r.?	-	-	intronic	28	0	0	83	9	10.84337349	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.53579022	0.53579022	1	0.005	0.19625	0.79875	0	0	0	0	3	4.60E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216191836	7	108601108	T	C	-	-	-	-	-	-	29	0	0	66	33	50	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.470588235	0.823529412	3	0	0	1	0	0	0	0	3	7.16E-58	1	1	1	NA	NA	NA
1353824	PD9772b	1216191961	7	109471640	A	C	-	-	-	-	-	-	41	0	0	76	26	34.21052632	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.690402477	0.845201238	2	0	0.00125	0.99875	0	0	0	0	3	1.80E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216192426	7	113177980	G	C	-	-	-	-	-	-	25	0	0	53	11	20.75471698	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.025527192	1.025527192	1	0	0	1	0	0	0	0	3	3.07E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216192710	7	115496479	T	C	-	-	-	-	-	-	32	0	0	50	25	50	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.470588235	0.823529412	3	0	0.00125	0.99875	0	0	0	0	3	3.34E-44	1	1	1	NA	NA	NA
1353824	PD9772b	1216192727	7	115650395	A	C	TFEC	CCDS5762.1	r.?	-	-	intronic	35	0	0	67	22	32.8358209	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.622475856	0.811237928	2	0	0.005	0.995	0	0	0	0	3	5.21E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216194055	7	125171466	G	C	-	-	-	-	-	-	32	0	0	86	43	50	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.470588235	0.823529412	3	0	0	1	0	0	0	0	3	6.11E-75	1	1	1	NA	NA	NA
1353824	PD9772b	1216194158	7	125946013	A	C	-	-	-	-	-	-	47	0	0	88	39	44.31818182	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.189839572	1.094919786	2	0	0	1	0	0	0	0	3	2.14E-65	1	1	1	NA	NA	NA
1353824	PD9772b	1216194186	7	126195098	G	C	GRM8	CCDS5794.1	r.?	-	-	intronic	51	0	0	66	37	56.06060606	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.770053476	0.923351159	3	0	0	1	0	0	0	0	3	2.83E-67	1	1	1	NA	NA	NA
1353824	PD9772b	1216194491	7	128448979	G	C	CCDC136	CCDS47704.1	r.?	-	-	intronic	34	0	0	92	36	39.13043478	210	0	0	57	14	24.56140351							4	3	1	1	NA	NA	NA	unphased	1.933503836	0.966751918	2	0	0	1	0	0	0	0	3	5.21E-58	1	3.84E-20	1	YES	somatic	1_1
1353824	PD9772b	1216194548	7	128939879	T	C	AHCYL2	CCDS5812.1	r.?	-	-	intronic	33	0	0	81	26	32.09876543	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.586056645	0.793028322	2	0	0.005	0.995	0	0	0	0	3	1.29E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216194650	7	129569966	G	C	UBE2H	CCDS5814.1	r.?	-	-	intronic	24	0	0	15	7	46.66666667	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.305882353	1.152941176	2	0	0.00375	0.99625	0	0	0	0	3	4.85E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216194879	7	131088300	G	C	MKLN1	CCDS34754.1	r.?	-	-	intronic	31	0	0	76	32	42.10526316	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.080495356	1.040247678	2	0	0	1	0	0	0	0	3	5.07E-53	1	1	1	NA	NA	NA
1353824	PD9772b	1216195169	7	133468975	T	C	EXOC4	CCDS5829.1	r.?	-	-	intronic	34	0	0	88	37	42.04545455	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.077540107	1.038770053	2	0	0	1	0	0	0	0	3	4.93E-61	1	1	1	NA	NA	NA
1353824	PD9772b	1216195370	7	135006112	T	C	-	-	-	-	-	-	25	0	0	49	14	28.57142857	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0	1	0	0	0	0	3	3.50E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216195740	7	137391146	T	C	DGKI	CCDS5845.1	r.?	-	-	intronic	43	0	0	56	18	32.14285714	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.588235294	0.794117647	2	0	0.005	0.995	0	0	0	0	3	6.76E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216196753	7	142766360	G	C	-	-	-	-	-	-	38	0	0	86	11	12.79069767	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.759917921	0.759917921	1	0	0.0125	0.9875	0	0	0	0	3	8.47E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216197431	7	147342637	T	C	CNTNAP2	CCDS5889.1	r.?	-	-	intronic	54	0	0	109	39	35.77981651	243	0	0	200	53	26.5							5	3	2	1	NA	NA	NA	unphased	2.12574204	1.06287102	2	0	0	1	0	0	0	0	3	7.64E-61	1	5.75E-74	1	YES	somatic	1_1
1353824	PD9772b	1216198028	7	151421267	T	C	PRKAG2	CCDS43683.1	r.?	-	-	intronic	22	0	0	20	8	40	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	1.176470588	1.176470588	1	0	0.0025	0.9975	0	0	0	0	3	4.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216198586	7	152335969	A	C	-	-	-	-	-	-	22	0	0	45	9	20	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.588235294	0.588235294	1	0.00375	0.15	0.84625	0	0	0	0	3	1.47E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216198966	7	155392158	G	C	-	-	-	-	-	-	29	0	0	58	18	31.03448276	0	0	NA	0	0	NA							1.393758832	1	0	0.606241168	1	1	0.393758832	unphased	0.724635094	0.724635094	1	0	0.025	0.975	0	0	0	0	3	1.42E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216200068	8	5516420	G	C	-	-	-	-	-	-	32	0	0	51	11	21.56862745	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.85005767	0.85005767	1	0	0.015	0.985	0	0	0	0	3	1.94E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216200087	8	5654740	T	C	-	-	-	-	-	-	34	0	0	78	21	26.92307692	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.061085973	1.061085973	1	0	0	1	0	0	0	0	3	1.99E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216200739	8	10413295	T	C	-	-	-	-	-	-	40	0	0	55	14	25.45454545	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.003208556	1.003208556	1	0	0	1	0	0	0	0	3	2.19E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216200776	8	11112410	T	C	ENSG00000236827	ENST00000443854	r.?	-	-	intronic	38	0	0	56	17	30.35714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.196428571	1.196428571	1	0	0	1	0	0	0	0	3	6.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216201139	8	12545071	T	C	OR7E8P	ENST00000317826	r.?	-	-	upstream	38	0	0	50	16	32	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.261176471	1.261176471	1	0	0	1	0	0	0	0	3	6.40E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216201648	8	16953883	T	C	EFHA2	CCDS5999.1	r.?	-	-	intronic	49	0	0	61	17	27.86885246	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.098360656	1.098360656	1	0	0	1	0	0	0	0	3	3.33E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216201669	8	17217918	G	C	MTMR7	CCDS34851.1	r.?	-	-	intronic	35	0	0	50	9	18	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.709411765	0.709411765	1	0	0.0325	0.9675	0	0	0	0	3	4.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216201840	8	18918362	G	C	-	-	-	-	-	-	25	0	0	37	12	32.43243243	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.278219396	1.278219396	1	0	0	1	0	0	0	0	3	4.03E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216202033	8	20831232	A	C	-	-	-	-	-	-	37	0	0	15	6	40	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.576470588	1.576470588	1	0	0.005	0.995	0	0	0	0	3	7.52E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216202166	8	22091897	G	C	PHYHIP	CCDS43723.1	r.?	-	-	upstream	31	0	0	29	11	37.93103448	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.494929006	1.494929006	1	0	0	1	0	0	0	0	3	1.56E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216202360	8	24132075	G	C	-	-	-	-	-	-	31	0	0	20	3	15	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.591176471	0.591176471	1	0.00375	0.05625	0.94	0	0	0	0	3	0.0001337	1	1	1	NA	NA	NA
1353824	PD9772b	1216202545	8	25861609	G	C	EBF2	CCDS43726.1	r.?	-	-	intronic	32	0	0	56	14	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	2.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216203369	8	34597085	G	C	-	-	-	-	-	-	32	0	0	46	12	26.08695652	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.028132992	1.028132992	1	0	0.00125	0.99875	0	0	0	0	3	8.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216203472	8	35730583	G	C	-	-	-	-	-	-	34	0	0	77	18	23.37662338	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92131398	0.92131398	1	0	0	1	0	0	0	0	3	4.71E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216203824	8	39655784	T	C	ADAM2	CCDS34884.1	r.?	-	-	intronic	41	0	0	67	17	25.37313433	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1	1	1	0	0	1	0	0	0	0	3	2.03E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216204118	8	42235281	G	C	DKK4	CCDS6130.1	r.?	-	-	upstream	29	0	0	98	16	16.32653061	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.806722689	0.806722689	1	0	0.00875	0.99125	0	0	0	0	3	9.83E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216204332	8	43750194	A	C	-	-	-	-	-	-	27	0	0	68	10	14.70588235	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.726643599	0.726643599	1	0.00125	0.02625	0.9725	0	0	0	0	3	2.18E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216204985	8	47934445	A	C	-	-	-	-	-	-	42	0	0	82	20	24.3902439	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0	1	0	0	0	0	3	4.40E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216205031	8	48224661	G	C	KIAA0146	CCDS43737.1	r.?	-	-	intronic	33	0	0	42	10	23.80952381	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.176470588	1.176470588	1	0	0.0025	0.9975	0	0	0	0	3	1.24E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216205058	8	48531961	A	C	KIAA0146	CCDS43737.1	r.?	-	-	intronic	20	0	0	72	17	23.61111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.166666667	1.166666667	1	0	0.0025	0.9975	0	0	0	0	3	7.97E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216205172	8	49805719	T	C	-	-	-	-	-	-	35	0	0	103	24	23.30097087	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.15134209	1.15134209	1	0	0	1	0	0	0	0	3	7.27E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216205356	8	51148215	G	C	-	-	-	-	-	-	41	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.00125	0.99875	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216205588	8	53022845	T	C	ST18	CCDS6149.1	r.?	-	-	downstream	41	0	0	62	12	19.35483871	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.956356736	0.956356736	1	0	0.00625	0.99375	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216205821	8	54944308	A	C	-	-	-	-	-	-	21	0	0	64	13	20.3125	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.206801471	1.206801471	1	0	0	1	0	0	0	0	3	1.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216205822	8	54949799	G	C	-	-	-	-	-	-	33	0	0	72	12	16.66666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.990196078	0.990196078	1	0	0.0025	0.9975	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216205857	8	55249924	T	C	-	-	-	-	-	-	39	0	0	131	26	19.84732824	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.179164796	1.179164796	1	0	0	1	0	0	0	0	3	1.74E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216205917	8	55566718	T	C	RP1	ENST00000427058	r.?	-	-	intronic	46	0	0	88	16	18.18181818	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.080213904	1.080213904	1	0	0.0025	0.9975	0	0	0	0	3	1.57E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216206194	8	57417207	T	C	-	-	-	-	-	-	36	0	0	91	11	12.08791209	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.718164189	0.718164189	1	0	0.0275	0.9725	0	0	0	0	3	1.60E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216206197	8	57434236	G	C	AC012349.1	ENST00000499425	r.?	-	-	intronic	36	0	0	88	12	13.63636364	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.810160428	0.810160428	1	0	0.01375	0.98625	0	0	0	0	3	3.53E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216206327	8	58215697	A	C	-	-	-	-	-	-	34	0	0	95	23	24.21052632	95	0	0	157	14	8.917197452							5	3	2	1	NA	NA	NA	unphased	1.438390093	0.719195046	2	0	0.02375	0.97625	0	0	0	0	3	5.51E-32	1	1.09E-13	1	YES	somatic	1_1
1353824	PD9772b	1216206344	8	58359315	G	C	-	-	-	-	-	-	33	0	0	90	17	18.88888889	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.122222222	1.122222222	1	0	0	1	0	0	0	0	3	5.05E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216206391	8	58735989	A	C	-	-	-	-	-	-	46	0	0	82	20	24.3902439	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0	1	0	0	0	0	3	4.40E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216206474	8	59396059	G	C	-	-	-	-	-	-	17	0	0	34	9	26.47058824	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.307958478	1.307958478	1	0	0.00125	0.99875	0	0	0	0	3	9.15E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216206555	8	60050379	T	C	-	-	-	-	-	-	35	0	0	79	15	18.98734177	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.128071482	1.128071482	1	0	0	1	0	0	0	0	3	1.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216206603	8	60357169	T	C	-	-	-	-	-	-	30	0	0	82	14	17.07317073	0	0	NA	2	0	0							5	3	2	1	NA	NA	NA	unphased	1.014347202	1.014347202	1	0	0	1	0	0	0	0	3	9.77E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216206646	8	60755373	T	C	-	-	-	-	-	-	30	0	0	78	16	20.51282051	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.013574661	1.013574661	1	0	0	1	0	0	0	0	3	1.96E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216206647	8	60759076	T	C	-	-	-	-	-	-	43	0	0	77	18	23.37662338	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.155080214	1.155080214	1	0	0	1	0	0	0	0	3	4.71E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216206698	8	61206440	T	C	-	-	-	-	-	-	39	0	0	88	21	23.86363636	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.417780749	1.417780749	1	0	0	1	0	0	0	0	3	3.45E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216206707	8	61279303	T	C	-	-	-	-	-	-	38	0	0	86	16	18.60465116	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.105335157	1.105335157	1	0	0.00125	0.99875	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216206921	8	62452533	T	C	ASPH	CCDS34898.1	r.?	-	-	intronic	27	0	0	92	11	11.95652174	2	0	0	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.710358056	0.710358056	1	0.00125	0.02625	0.9725	0	0	0	0	3	1.81E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216206945	8	62551195	G	C	ASPH	CCDS34898.1	r.?	-	-	intronic	44	0	0	65	15	23.07692308	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.371040724	1.371040724	1	0	0	1	0	0	0	0	3	5.00E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216207089	8	63484271	G	C	-	-	-	-	-	-	30	0	0	37	7	18.91891892	0	0	NA	0	0	NA							4.081805738	3	1	0.918194262	3	2	0.081805738	unphased	0.950293931	0.950293931	1	0	0.00375	0.99625	0	0	0	0	3	7.05E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216207114	8	63682009	T	C	NKAIN3	ENST00000328472	r.?	-	-	intronic	30	0	0	75	13	17.33333333	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.029803922	1.029803922	1	0	0.0025	0.9975	0	0	0	0	3	1.16E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216207156	8	63881943	G	C	-	-	-	-	-	-	35	0	0	99	15	15.15151515	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.900178253	0.900178253	1	0	0.00625	0.99375	0	0	0	0	3	4.43E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216207233	8	64392794	T	C	-	-	-	-	-	-	34	0	0	83	10	12.04819277	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.715804394	0.715804394	1	0	0.03875	0.96125	0	0	0	0	3	1.70E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216207281	8	64699264	A	C	-	-	-	-	-	-	43	0	0	83	12	14.45783133	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.858965273	0.858965273	1	0	0.0075	0.9925	0	0	0	0	3	1.70E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216208196	8	71298520	T	C	NCOA2	CCDS47872.1	r.?	-	-	intronic	34	0	0	96	25	26.04166667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.547181373	0.773590686	2	0	0.00375	0.99625	0	0	0	0	3	1.59E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216208200	8	71323747	T	C	-	-	-	-	-	-	27	0	0	115	27	23.47826087	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.39488491	0.697442455	2	0	0.02375	0.97625	0	0	0	0	3	7.05E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216208364	8	72284176	A	C	-	-	-	-	-	-	34	0	0	103	51	49.51456311	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.941747573	0.980582524	3	0	0	1	0	0	0	0	3	2.72E-88	1	1	1	NA	NA	NA
1353824	PD9772b	1216208443	8	73080836	G	C	-	-	-	-	-	-	33	0	0	78	14	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.00125	0.99875	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216208594	8	74295967	T	C	-	-	-	-	-	-	38	0	0	84	16	19.04761905	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.00125	0.99875	0	0	0	0	3	7.07E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216208806	8	76207905	G	C	-	-	-	-	-	-	36	0	0	48	9	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.00375	0.99625	0	0	0	0	3	2.75E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216208832	8	76348911	T	C	HNF4G	ENST00000354370	r.?	-	-	intronic	46	0	0	77	13	16.88311688	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.834224599	0.834224599	1	0	0.00625	0.99375	0	0	0	0	3	1.67E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216208871	8	76687172	G	C	-	-	-	-	-	-	45	0	0	71	14	19.71830986	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.974316487	0.974316487	1	0	0.0025	0.9975	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216208889	8	76794027	T	C	-	-	-	-	-	-	34	0	0	84	19	22.61904762	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.117647059	1.117647059	1	0	0	1	0	0	0	0	3	4.62E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216209079	8	78220935	A	C	-	-	-	-	-	-	40	0	0	61	10	16.39344262	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.81002893	0.81002893	1	0	0.01125	0.98875	0	0	0	0	3	6.98E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216209105	8	78411414	T	C	-	-	-	-	-	-	31	0	0	81	17	20.98765432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.037037037	1.037037037	1	0	0	1	0	0	0	0	3	7.24E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216209289	8	79807344	G	C	-	-	-	-	-	-	35	0	0	101	17	16.83168317	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1	1	1	0	0.00125	0.99875	0	0	0	0	3	4.10E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216209295	8	79845442	G	C	-	-	-	-	-	-	37	0	0	96	32	33.33333333	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.980392157	0.990196078	2	0	0	1	0	0	0	0	3	5.07E-49	1	1	1	NA	NA	NA
1353824	PD9772b	1216209611	8	81867589	T	C	AC012533.1	ENST00000501214	r.?	-	-	downstream	26	0	0	84	20	23.80952381	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.414565826	1.414565826	1	0	0	1	0	0	0	0	3	7.54E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216209843	8	83436889	T	C	-	-	-	-	-	-	42	0	0	107	14	13.08411215	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.777350192	0.777350192	1	0	0.01125	0.98875	0	0	0	0	3	4.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216209971	8	84194691	A	C	-	-	-	-	-	-	39	0	0	86	10	11.62790698	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.690834473	0.690834473	1	0	0.0325	0.9675	0	0	0	0	3	2.45E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216210277	8	85918612	T	C	-	-	-	-	-	-	31	0	0	100	34	34	0	0	NA	1	0	0							5	3	2	1	NA	NA	NA	unphased	2.02	1.01	2	0	0	1	0	0	0	0	3	2.45E-52	1	1	1	NA	NA	NA
1353824	PD9772b	1216210334	8	86286494	A	C	-	-	-	-	-	-	31	0	0	82	10	12.19512195	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.724533716	0.724533716	1	0	0.02125	0.97875	0	0	0	0	3	1.51E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216210604	8	87543506	G	C	CPNE3	CCDS6243.1	r.?	-	-	intronic	29	0	0	88	12	13.63636364	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.810160428	0.810160428	1	0	0.01125	0.98875	0	0	0	0	3	3.53E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216210887	8	89686512	T	C	-	-	-	-	-	-	26	0	0	70	30	42.85714286	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.546218487	0.848739496	3	0	0	1	0	0	0	0	3	4.25E-50	1	1	1	NA	NA	NA
1353824	PD9772b	1216210909	8	89849554	T	C	-	-	-	-	-	-	45	0	0	72	11	15.27777778	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.907679739	0.907679739	1	0	0.00375	0.99625	0	0	0	0	3	1.12E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216211185	8	91855877	G	C	NECAB1	CCDS47889.1	r.?	-	-	intronic	40	0	0	89	17	19.1011236	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.134831461	1.134831461	1	0	0	1	0	0	0	0	3	4.11E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216211219	8	92101418	A	C	OTUD6B	CCDS6253.2	r.?	-	-	downstream	30	0	0	100	37	37	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.198235294	1.099117647	2	0	0	1	0	0	0	0	3	1.83E-58	1	1	1	NA	NA	NA
1353824	PD9772b	1216211276	8	92509271	G	C	-	-	-	-	-	-	35	0	0	76	11	14.47368421	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.859907121	0.859907121	1	0	0.01	0.99	0	0	0	0	3	2.08E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216211379	8	93270072	T	C	-	-	-	-	-	-	21	0	0	94	9	9.574468085	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.568836045	0.568836045	1	0.00375	0.12375	0.8725	0	0	0	0	3	1.42E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216211697	8	95455577	A	C	RAD54B	CCDS6262.1	r.?	-	-	intronic	32	0	0	92	11	11.95652174	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.710358056	0.710358056	1	0	0.025	0.975	0	0	0	0	3	1.81E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216211880	8	96347393	G	C	-	-	-	-	-	-	28	0	0	84	12	14.28571429	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.848739496	0.848739496	1	0	0.00625	0.99375	0	0	0	0	3	1.98E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216211902	8	96528798	G	C	-	-	-	-	-	-	41	0	0	85	12	14.11764706	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.838754325	0.838754325	1	0	0.00625	0.99375	0	0	0	0	3	2.29E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216211903	8	96548365	T	C	-	-	-	-	-	-	35	0	0	100	20	20	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.188235294	1.188235294	1	0	0	1	0	0	0	0	3	3.49E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216211904	8	96552638	A	C	-	-	-	-	-	-	39	0	0	82	29	35.36585366	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.101147776	1.050573888	2	0	0	1	0	0	0	0	3	1.81E-45	1	1	1	NA	NA	NA
1353824	PD9772b	1216211958	8	96885316	T	C	-	-	-	-	-	-	47	0	0	45	7	15.55555556	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.924183007	0.924183007	1	0	0.015	0.985	0	0	0	0	3	3.00E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216211985	8	97035246	T	C	-	-	-	-	-	-	40	0	0	80	14	17.5	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.039705882	1.039705882	1	0	0.00125	0.99875	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216212167	8	98347270	G	C	-	-	-	-	-	-	35	0	0	33	8	24.24242424	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.440285205	1.440285205	1	0	0.00125	0.99875	0	0	0	0	3	4.85E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216212443	8	100027433	T	C	VPS13B	CCDS6280.1	r.?	-	-	intronic	20	0	0	39	9	23.07692308	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.371040724	1.371040724	1	0	0.00125	0.99875	0	0	0	0	3	3.62E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216212472	8	100266105	A	C	VPS13B	CCDS6280.1	r.?	-	-	intronic	32	0	0	94	9	9.574468085	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.699536107	0.699536107	1	0	0.025	0.975	0	0	0	0	3	1.42E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216213093	8	103606504	A	C	-	-	-	-	-	-	33	0	0	44	6	13.63636364	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.996309002	0.996309002	1	0.00125	0.01125	0.9875	0	0	0	0	3	9.37E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216213442	8	105648494	G	C	-	-	-	-	-	-	32	0	0	118	13	11.01694915	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.804927611	0.804927611	1	0	0.0125	0.9875	0	0	0	0	3	5.21E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216213486	8	105841670	T	C	-	-	-	-	-	-	36	0	0	125	40	32	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	2.338005124	0.988548249	2.365089541	0	0	1	0	0	0	0	3	4.92E-60	1	1	1	NA	NA	NA
1353824	PD9772b	1216213545	8	106103921	T	C	-	-	-	-	-	-	27	0	0	100	12	12	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.876751921	0.876751921	1	0	0.0025	0.9975	0	0	0	0	3	1.71E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216213823	8	107997411	G	C	-	-	-	-	-	-	39	0	0	104	8	7.692307692	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.562020462	0.562020462	1	0.0075	0.115	0.8775	0	0	0	0	3	6.57E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216214170	8	109969482	A	C	-	-	-	-	-	-	55	0	0	117	39	33.33333333	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	2.435422004	1.029737759	2.365089541	0	0	1	0	0	0	0	3	2.14E-59	1	1	1	NA	NA	NA
1353824	PD9772b	1216214203	8	110254726	T	C	NUDCD1	CCDS6312.1	r.2375a>g	c.?	p.?	3'UTR variant	32	0	0	112	18	16.07142857	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.174221323	1.174221323	1	0	0	1	0	0	0	0	3	6.93E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216214204	8	110259450	T	C	NUDCD1	CCDS6312.1	r.?	-	-	intronic	33	0	0	105	12	11.42857143	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.83500183	0.83500183	1	0	0.00625	0.99375	0	0	0	0	3	3.10E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216214518	8	112085811	A	C	-	-	-	-	-	-	30	0	0	104	12	11.53846154	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.843030694	0.843030694	1	0	0.01125	0.98875	0	0	0	0	3	2.76E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216214548	8	112260742	T	C	-	-	-	-	-	-	44	0	0	114	26	22.80701754	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.666341371	0.833170686	2	0	0.00375	0.99625	0	0	0	0	3	3.31E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216214625	8	112638215	T	C	-	-	-	-	-	-	41	0	0	95	8	8.421052632	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.615264506	0.615264506	1	0.00375	0.085	0.91125	0	0	0	0	3	3.23E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216214877	8	114053899	T	C	CSMD3	CCDS6315.1	r.?	-	-	intronic	43	0	0	102	12	11.76470588	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.859560707	0.859560707	1	0	0.0075	0.9925	0	0	0	0	3	2.18E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216215485	8	117718810	G	C	EIF3H	CCDS6319.1	r.?	-	-	intronic	35	0	0	80	16	20	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.461253202	1.461253202	1	0	0	1	0	0	0	0	3	3.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216215492	8	117783230	G	C	UTP23	CCDS6320.1	r.?	-	-	intronic	41	0	0	100	27	27	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.972691823	0.986345912	2	0	0	1	0	0	0	0	3	1.00E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1216215518	8	117900501	T	C	-	-	-	-	-	-	42	0	0	97	18	18.55670103	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.35580194	1.35580194	1	0	0	1	0	0	0	0	3	4.40E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216215603	8	118566193	G	C	-	-	-	-	-	-	34	0	0	111	11	9.90990991	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.72404438	0.72404438	1	0	0.03125	0.96875	0	0	0	0	3	1.46E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216215985	8	120597200	A	C	ENPP2	CCDS6329.1	r.?	-	-	intronic	36	0	0	132	30	22.72727273	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.660515003	0.830257501	2	0	0.0025	0.9975	0	0	0	0	3	2.49E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216216075	8	120953643	G	C	DEPDC6	CCDS6331.1	r.?	-	-	intronic	26	0	0	60	10	16.66666667	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.217711002	1.217711002	1	0	0	1	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216216107	8	121041819	G	C	DEPDC6	CCDS6331.1	r.?	-	-	intronic	34	0	0	82	10	12.19512195	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.89100805	0.89100805	1	0	0.005	0.995	0	0	0	0	3	1.51E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216216368	8	122408107	G	C	-	-	-	-	-	-	32	0	0	105	24	22.85714286	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.67000366	0.83500183	2	0	0.00375	0.99625	0	0	0	0	3	1.21E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216216526	8	123112750	T	C	-	-	-	-	-	-	35	0	0	101	9	8.910891089	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.651053407	0.651053407	1	0	0.04875	0.95125	0	0	0	0	3	2.70E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216216672	8	123941741	A	C	ZHX2	CCDS6336.1	r.?	-	-	intronic	34	0	0	93	9	9.677419355	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.707058001	0.707058001	1	0	0.04	0.96	0	0	0	0	3	1.29E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216216764	8	124497018	G	C	-	-	-	-	-	-	26	0	0	31	8	25.80645161	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.885488003	0.942744002	2	0	0.0075	0.9925	0	0	0	0	3	2.78E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216216957	8	125572877	G	C	MTSS1	CCDS6353.1	r.?	-	-	intronic	37	0	0	99	8	8.080808081	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.590405334	0.590405334	1	0	0.10625	0.89375	0	0	0	0	3	4.46E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216217021	8	125868683	A	C	ENSG00000235517	ENST00000422573	r.?	-	-	intronic	30	0	0	103	26	25.24271845	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.844300158	0.922150079	2	0	0.0025	0.9975	0	0	0	0	3	1.74E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216217133	8	126520932	G	C	-	-	-	-	-	-	16	0	0	65	14	21.53846154	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.573657295	1.152786867	1.365089541	0	0.00125	0.99875	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216217134	8	126526494	G	C	-	-	-	-	-	-	30	0	0	91	13	14.28571429	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.043752287	1.043752287	1	0	0.0075	0.9925	0	0	0	0	3	1.63E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216217456	8	128280110	A	C	-	-	-	-	-	-	39	0	0	124	53	42.74193548	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	2.817042898	0.939014299	3	0	0	1	0	0	0	0	3	3.24E-87	1	1	1	NA	NA	NA
1353824	PD9772b	1216217931	8	130682821	G	C	AC013300.1	ENST00000446592	r.?	-	-	intronic	33	0	0	106	17	16.03773585	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.057017876	1.057017876	1	0	0	1	0	0	0	0	3	9.78E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216218169	8	131974483	A	C	ADCY8	CCDS6363.1	r.?	-	-	intronic	52	0	0	123	35	28.45528455	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.875435831	0.937717915	2	0	0	1	0	0	0	0	3	1.20E-50	1	1	1	NA	NA	NA
1353824	PD9772b	1216218420	8	133573962	G	C	-	-	-	-	-	-	33	0	0	94	17	18.08510638	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.191956329	1.191956329	1	0	0.00125	0.99875	0	0	0	0	3	1.12E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216218435	8	133637045	T	C	LRRC6	CCDS6365.1	r.?	-	-	intronic	34	0	0	116	16	13.79310345	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	0.909078255	0.909078255	1	0	0.00375	0.99625	0	0	0	0	3	1.66E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216218465	8	133815196	G	C	PHF20L1	CCDS6367.2	r.?	-	-	intronic	32	0	0	124	43	34.67741935	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	2.28552537	0.862579299	2.649640877	0	0.00125	0.99875	0	0	0	0	3	3.29E-66	1	1	1	NA	NA	NA
1353824	PD9772b	1216218562	8	134459171	G	C	-	-	-	-	-	-	37	0	0	43	7	16.27906977	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.072923754	1.072923754	1	0.00125	0.00375	0.995	0	0	0	0	3	2.15E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216218570	8	134540068	T	C	ST3GAL1	CCDS6373.1	r.?	-	-	intronic	30	0	0	46	14	30.43478261	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	2.005900932	1.002950466	2	0	0.00125	0.99875	0	0	0	0	3	1.26E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216218654	8	135028462	T	C	-	-	-	-	-	-	32	0	0	95	37	38.94736842	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	2.566949914	0.968791634	2.649640877	0	0	1	0	0	0	0	3	1.75E-59	1	1	1	NA	NA	NA
1353824	PD9772b	1216219177	8	138013063	G	C	-	-	-	-	-	-	34	0	0	98	15	15.30612245	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.008798574	1.008798574	1	0	0.005	0.995	0	0	0	0	3	3.78E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216219872	8	141776036	T	C	PTK2	CCDS6381.1	r.?	-	-	intronic	28	0	0	105	19	18.0952381	0	0	NA	0	0	NA							0.196534454	0	0	0.803465546	1	0	0.196534454	unphased	0.205871501	1.047508447	0.196534454	0	0.0025	0.9975	0	0	0	0	3	4.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216219884	8	141831074	T	C	PTK2	CCDS6381.1	r.?	-	-	intronic	33	0	0	61	11	18.03278689	0	0	NA	0	0	NA							0.196534454	0	0	0.803465546	1	0	0.196534454	unphased	0.205160986	1.043893232	0.196534454	0	0.00125	0.99875	0	0	0	0	3	1.62E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216219966	8	142515583	G	C	-	-	-	-	-	-	30	0	0	43	9	20.93023256	0	0	NA	0	0	NA							0.196534454	0	0	0.803465546	1	0	0.196534454	unphased	0.238125542	1.211622378	0.196534454	0	0.0025	0.9975	0	0	0	0	3	9.45E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216220469	9	376502	A	C	DOCK8	CCDS6440.1	r.?	-	-	intronic	33	0	0	116	19	16.37931034	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	1.136916836	1.136916836	1	0	0.00125	0.99875	0	0	0	0	3	3.49E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216220685	9	1255540	T	C	-	-	-	-	-	-	53	0	0	101	21	20.79207921	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	1.44321491	0.721607455	2	0	0.02875	0.97125	0	0	0	0	3	8.38E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216220844	9	2349839	T	C	-	-	-	-	-	-	28	0	0	103	69	66.99029126	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.649914335	0.929982867	5	0	0	1	0	0	0	0	3	2.81E-132	1	1	1	NA	NA	NA
1353824	PD9772b	1216220867	9	2444768	A	C	-	-	-	-	-	-	36	0	0	113	8	7.079646018	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	0.491410724	0.491410724	1	0.01625	0.28125	0.7025	0	0	0	0	3	1.25E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216221867	9	7102616	G	C	KDM4C	CCDS6471.1	r.?	-	-	intronic	33	0	0	118	74	62.71186441	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.352941176	1.088235294	4	0	0	1	0	0	0	0	3	2.27E-138	1	1	1	NA	NA	NA
1353824	PD9772b	1216222165	9	8812486	G	C	PTPRD	CCDS43786.1	r.?	-	-	intronic	38	0	0	95	14	14.73684211	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	1.022910217	1.022910217	1	0	0.00125	0.99875	0	0	0	0	3	8.54E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216222299	9	9259246	T	C	PTPRD	CCDS43786.1	r.?	-	-	intronic	50	0	0	111	62	55.85585586	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.877053524	0.969263381	4	0	0	1	0	0	0	0	3	1.57E-111	1	1	1	NA	NA	NA
1353824	PD9772b	1216222805	9	11426167	G	C	-	-	-	-	-	-	39	0	0	125	76	60.8	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.220235294	1.055058824	4	0	0	1	0	0	0	0	3	1.70E-140	1	1	1	NA	NA	NA
1353824	PD9772b	1216223310	9	13182979	T	C	MPDZ	CCDS47951.1	r.?	-	-	intronic	38	0	0	125	74	59.2	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.109176471	1.027294118	4	0	0	1	0	0	0	0	3	1.51E-135	1	1	1	NA	NA	NA
1353824	PD9772b	1216223762	9	15549428	T	C	C9orf93	CCDS6481.1	r.?	-	-	upstream	22	0	0	83	43	51.80722892	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.596031184	0.899007796	4	0	0	1	0	0	0	0	3	7.48E-76	1	1	1	NA	NA	NA
1353824	PD9772b	1216224118	9	17456057	G	C	CNTLN	CCDS43789.1	r.?	-	-	intronic	26	0	0	84	23	27.38095238	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	2.25E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216224147	9	17557105	T	C	-	-	-	-	-	-	37	0	0	109	66	60.55045872	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.202914193	1.050728548	4	0	0	1	0	0	0	0	3	4.81E-122	1	1	1	NA	NA	NA
1353824	PD9772b	1216224326	9	18514925	G	C	ADAMTSL1	CCDS47954.1	r.?	-	-	intronic	37	0	0	82	10	12.19512195	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	0.846484935	0.846484935	1	0	0.01125	0.98875	0	0	0	0	3	1.51E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216224468	9	19090537	T	C	HAUS6	CCDS6489.1	r.?	-	-	intronic	29	0	0	43	6	13.95348837	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	0.968536252	0.968536252	1	0.00125	0.00875	0.99	0	0	0	0	3	8.13E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216224771	9	20285371	G	C	-	-	-	-	-	-	38	0	0	139	78	56.11510791	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.895048667	0.973762167	4	0	0	1	0	0	0	0	3	4.09E-140	1	1	1	NA	NA	NA
1353824	PD9772b	1216225316	9	27756619	G	C	-	-	-	-	-	-	48	0	0	92	62	67.39130435	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.677749361	0.935549872	5	0	0	1	0	0	0	0	3	2.79E-119	1	1	1	NA	NA	NA
1353824	PD9772b	1216225329	9	27868698	G	C	-	-	-	-	-	-	38	0	0	116	18	15.51724138	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	1.077079108	1.077079108	1	0	0.0025	0.9975	0	0	0	0	3	1.35E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216225680	9	29356419	T	C	-	-	-	-	-	-	41	0	0	129	68	52.71317829	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.658914729	0.914728682	4	0	0	1	0	0	0	0	3	9.91E-120	1	1	1	NA	NA	NA
1353824	PD9772b	1216225841	9	30083499	G	C	-	-	-	-	-	-	27	0	0	125	74	59.2	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.109176471	1.027294118	4	0	0	1	0	0	0	0	3	1.51E-135	1	1	1	NA	NA	NA
1353824	PD9772b	1216226271	9	32313301	A	C	-	-	-	-	-	-	39	0	0	90	13	14.44444444	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.71372549	0.71372549	1	0	0.03375	0.96625	0	0	0	0	3	1.40E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216226682	9	33970846	G	C	UBAP2	CCDS6547.1	r.?	-	-	intronic	38	0	0	53	13	24.52830189	0	0	NA	0	0	NA							4.816361473	4	0	0.183638527	4	1	0.816361473	unphased	1.412226288	1.412226288	1	0	0	1	0	0	0	0	3	8.53E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216226754	9	34152087	G	C	-	-	-	-	-	-	22	0	0	105	65	61.9047619	0	0	NA	0	0	NA							4.816361473	4	0	0.183638527	4	1	0.816361473	unphased	3.564190155	0.891047539	4	0	0	1	0	0	0	0	3	3.58E-121	1	1	1	NA	NA	NA
1353824	PD9772b	1216227530	9	37924889	T	C	SHB	CCDS43806.1	r.?	-	-	intronic	33	0	0	46	4	8.695652174	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.429667519	0.429667519	1	0.02125	0.1875	0.79125	0	0	0	0	3	8.62E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216228266	9	44184814	G	C	-	-	-	-	-	-	45	0	0	58	14	24.13793103	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.192697769	1.192697769	1	0	0	1	0	0	0	0	3	5.04E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216230338	9	66919415	T	C	-	-	-	-	-	-	8	0	0	30	4	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0.0025	0.04125	0.95625	0	0	0	0	3	1.54E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216236221	9	72631485	G	C	-	-	-	-	-	-	31	0	0	93	7	7.52688172	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.371916509	0.371916509	1	0.11625	0.66125	0.2225	0	0	0	0	2	5.08E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216236689	9	75773522	G	C	ANXA1	CCDS6645.1	r.948+5g>c	c.66+5G>C	p.?	ess splice	37	0	0	59	14	23.72881356	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.172482552	1.172482552	1	0	0	1	0	0	0	0	3	6.58E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216236728	9	76144845	T	C	-	-	-	-	-	-	50	0	0	71	12	16.90140845	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.835128418	0.835128418	1	0	0.005	0.995	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216237077	9	78565366	G	C	PCSK5	CCDS6652.1	r.?	-	-	intronic	32	0	0	72	14	19.44444444	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.960784314	0.960784314	1	0	0.00125	0.99875	0	0	0	0	3	1.39E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216237329	9	80445748	T	C	GNAQ	CCDS6658.1	r.?	-	-	intronic	42	0	0	82	12	14.63414634	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.723098996	0.723098996	1	0.00125	0.01875	0.98	0	0	0	0	3	1.46E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216237358	9	80613148	G	C	GNAQ	CCDS6658.1	r.?	-	-	intronic	41	0	0	57	16	28.07017544	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.386996904	1.386996904	1	0	0	1	0	0	0	0	3	7.28E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216237365	9	80639447	T	C	GNAQ	CCDS6658.1	r.?	-	-	intronic	29	0	0	82	11	13.41463415	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.662840746	0.662840746	1	0	0.05875	0.94125	0	0	0	0	3	4.94E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216237557	9	82323225	T	C	TLE4	CCDS43837.1	r.?	-	-	intronic	24	0	0	58	18	31.03448276	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.53346856	0.76673428	2	0	0.0175	0.9825	0	0	0	0	3	1.42E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216237637	9	83024535	G	C	-	-	-	-	-	-	46	0	0	82	20	24.3902439	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0	1	0	0	0	0	3	4.40E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216237655	9	83143381	A	C	-	-	-	-	-	-	33	0	0	77	16	20.77922078	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.026737968	1.026737968	1	0	0	1	0	0	0	0	3	1.56E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216237721	9	83475081	G	C	-	-	-	-	-	-	48	0	0	94	15	15.95744681	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.788485607	0.788485607	1	0	0.00875	0.99125	0	0	0	0	3	1.96E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216237751	9	83621433	G	C	-	-	-	-	-	-	26	0	0	78	14	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0	1	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216237963	9	85255375	G	C	-	-	-	-	-	-	38	0	0	78	12	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0.00125	0.02125	0.9775	0	0	0	0	3	7.82E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216238078	9	85923662	T	C	FRMD3	CCDS43840.1	r.?	-	-	intronic	34	0	0	61	16	26.2295082	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.296046287	1.296046287	1	0	0.00125	0.99875	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216238267	9	87264818	G	C	-	-	-	-	-	-	43	0	0	81	25	30.86419753	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.525054466	0.762527233	2	0	0.0075	0.9925	0	0	0	0	3	1.20E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216238556	9	89427650	G	C	-	-	-	-	-	-	40	0	0	80	20	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	2.53E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216238662	9	90302586	T	C	DAPK1	CCDS43842.1	r.?	-	-	intronic	28	0	0	76	19	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	5.56E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216238762	9	90977080	T	C	-	-	-	-	-	-	38	0	0	17	4	23.52941176	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0.0125	0.9875	0	0	0	0	3	1.41E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216238849	9	91602654	G	C	C9orf47	CCDS47989.1	r.?	-	-	upstream	46	0	0	85	10	11.76470588	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.581314879	0.581314879	1	0.00625	0.13875	0.855	0	0	0	0	3	2.17E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216238858	9	91771657	T	C	SHC3	CCDS6681.1	r.?	-	-	intronic	37	0	0	75	24	32	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.581176471	0.790588235	2	0	0.00125	0.99875	0	0	0	0	3	1.20E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216239123	9	94586195	T	C	ROR2	CCDS6691.1	r.?	-	-	intronic	28	0	0	66	12	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.00125	0.99875	0	0	0	0	3	9.36E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216239545	9	98481966	A	C	-	-	-	-	-	-	30	0	0	72	16	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	4.82E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216239547	9	98499422	G	C	-	-	-	-	-	-	35	0	0	15	3	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0.00125	0.01875	0.98	0	0	0	0	3	5.44E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216239979	9	101711700	T	C	COL15A1	CCDS35081.1	r.?	-	-	intronic	29	0	0	75	15	20	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.188235294	1.188235294	1	0	0	1	0	0	0	0	3	5.25E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216240104	9	102658972	T	C	-	-	-	-	-	-	42	0	0	82	15	18.29268293	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.086800574	1.086800574	1	0	0.00125	0.99875	0	0	0	0	3	2.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216240125	9	102826975	T	C	ERP44	CCDS35082.1	r.?	-	-	intronic	33	0	0	64	15	23.4375	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.392463235	1.392463235	1	0	0.00125	0.99875	0	0	0	0	3	3.87E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216240240	9	103708146	T	C	-	-	-	-	-	-	40	0	0	111	33	29.72972973	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.766295707	0.883147854	2	0	0	1	0	0	0	0	3	1.43E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1216240385	9	104597441	T	C	-	-	-	-	-	-	47	0	0	81	15	18.51851852	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.100217865	1.100217865	1	0	0	1	0	0	0	0	3	1.82E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216240586	9	105944178	A	C	-	-	-	-	-	-	34	0	0	92	12	13.04347826	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.774936061	0.774936061	1	0	0.01625	0.98375	0	0	0	0	3	6.12E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216240619	9	106254802	T	C	-	-	-	-	-	-	46	0	0	63	14	22.22222222	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.320261438	1.320261438	1	0	0.00125	0.99875	0	0	0	0	3	1.81E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216240738	9	107193292	G	C	-	-	-	-	-	-	33	0	0	98	34	34.69387755	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.06122449	1.030612245	2	0	0	1	0	0	0	0	3	1.07E-52	1	1	1	NA	NA	NA
1353824	PD9772b	1216241103	9	109199356	T	C	-	-	-	-	-	-	32	0	0	45	9	20	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.188235294	1.188235294	1	0	0	1	0	0	0	0	3	1.47E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216241540	9	111511674	G	C	-	-	-	-	-	-	24	0	0	61	11	18.03278689	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.071359691	1.071359691	1	0	0.00125	0.99875	0	0	0	0	3	1.62E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216241764	9	112859748	T	C	PALM2-AKAP2	CCDS35100.1	r.?	-	-	intronic	23	0	0	22	4	18.18181818	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.080213904	1.080213904	1	0	0.01625	0.98375	0	0	0	0	3	4.25E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216241787	9	112920243	G	C	PALM2-AKAP2	CCDS35100.1	r.?	-	-	intronic	37	0	0	67	14	20.89552239	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.24143986	1.24143986	1	0	0	1	0	0	0	0	3	4.66E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216241798	9	112984572	T	C	-	-	-	-	-	-	32	0	0	91	19	20.87912088	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.240465417	1.240465417	1	0	0	1	0	0	0	0	3	2.46E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216242009	9	113894391	G	C	-	-	-	-	-	-	35	0	0	77	6	7.792207792	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.462948816	0.462948816	1	0.01125	0.235	0.75375	0	0	0	0	3	2.73E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216242022	9	113977692	T	C	-	-	-	-	-	-	29	0	0	73	16	21.91780822	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.302175665	1.302175665	1	0	0.00125	0.99875	0	0	0	0	3	6.15E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216242126	9	114613583	A	C	-	-	-	-	-	-	33	0	0	59	12	20.33898305	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.208374875	1.208374875	1	0	0	1	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216242285	9	115166584	G	C	HSDL2	CCDS43864.1	r.?	-	-	intronic	31	0	0	92	14	15.2173913	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.904092072	0.904092072	1	0	0.005	0.995	0	0	0	0	3	5.34E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216242544	9	116643090	G	C	ZNF618	CCDS48008.1	r.?	-	-	intronic	46	0	0	91	13	14.28571429	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.848739496	0.848739496	1	0	0.00875	0.99125	0	0	0	0	3	1.63E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216242949	9	120543633	G	C	-	-	-	-	-	-	27	0	0	66	18	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0	1	0	0	0	0	3	2.08E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216243283	9	123900610	T	C	CEP110	CCDS35118.1	r.?	-	-	intronic	35	0	0	55	15	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0	1	0	0	0	0	3	3.01E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216243357	9	124865427	T	C	-	-	-	-	-	-	41	0	0	51	14	27.45098039	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.08189158	1.08189158	1	0	0	1	0	0	0	0	3	6.64E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216243440	9	125630573	T	C	RC3H2	CCDS43874.1	r.?	-	-	intronic	37	0	0	24	5	20.83333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.821078431	0.821078431	1	0	0.0125	0.9875	0	0	0	0	3	1.23E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216243455	9	125748858	G	C	RABGAP1	CCDS6848.2	r.?	-	-	intronic	42	0	0	54	19	35.18518519	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.38671024	1.38671024	1	0	0	1	0	0	0	0	3	2.97E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216245358	X	6698442	A	C	-	-	-	-	-	-	42	0	0	76	15	19.73684211	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0	1	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216245410	X	7089931	A	C	-	-	-	-	-	-	31	0	0	60	11	18.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.905882353	0.905882353	1	0	0.0075	0.9925	0	0	0	0	3	1.34E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216245808	X	9702945	G	C	GPR143	CCDS14134.1	r.?	-	-	intronic	23	0	0	9	3	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	1.647058824	1	0.00125	0.005	0.99375	0	0	0	0	3	1.03E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216246073	X	12536836	A	C	FRMPD4	CCDS35201.1	r.?	-	-	intronic	38	0	0	65	11	16.92307692	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.836199095	0.836199095	1	0	0.00625	0.99375	0	0	0	0	3	3.41E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216246853	X	22033003	A	C	-	-	-	-	-	-	23	0	0	24	7	29.16666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.149509804	1.149509804	1	0	0.005	0.995	0	0	0	0	3	2.51E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216247261	X	26459204	G	C	-	-	-	-	-	-	25	0	0	72	19	26.38888889	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.04003268	1.04003268	1	0	0	1	0	0	0	0	3	1.75E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216247700	X	31353581	T	C	DMD	CCDS14233.1	r.?	-	-	intronic	33	0	0	63	16	25.3968254	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.000933707	1.000933707	1	0	0	1	0	0	0	0	3	4.48E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216248120	X	36501581	T	C	-	-	-	-	-	-	38	0	0	41	13	31.70731707	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.24964132	1.24964132	1	0	0.0025	0.9975	0	0	0	0	3	1.89E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216248277	X	38162008	G	C	RPGR	CCDS35229.1	r.?	-	-	intronic	32	0	0	41	8	19.51219512	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.769010043	0.769010043	1	0	0.0225	0.9775	0	0	0	0	3	3.22E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216249487	X	53079957	G	C	GPR173	CCDS14349.1	r.?	-	-	intronic	31	0	0	36	9	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.00125	0.99875	0	0	0	0	3	1.63E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216249561	X	53592731	T	C	HUWE1	CCDS35301.1	r.?	-	-	intronic	26	0	0	53	13	24.52830189	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.211986681	1.211986681	1	0	0	1	0	0	0	0	3	8.53E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216249688	X	54523665	T	C	FGD1	CCDS14359.1	r.?	-	-	upstream	20	0	0	31	8	25.80645161	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.275142315	1.275142315	1	0.00125	0	0.99875	0	0	0	0	3	2.78E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216249699	X	54634512	G	C	-	-	-	-	-	-	26	0	0	71	11	15.49295775	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.765534383	0.765534383	1	0	0.0175	0.9825	0	0	0	0	3	9.49E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216249973	X	56997240	G	C	-	-	-	-	-	-	26	0	0	72	16	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	4.82E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216250046	X	57517765	G	C	FAAH2	CCDS14375.1	r.?	-	-	downstream	42	0	0	39	10	25.64102564	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.266968326	1.266968326	1	0	0	1	0	0	0	0	3	5.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216250098	X	58195038	G	C	-	-	-	-	-	-	20	0	0	91	14	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.01375	0.98625	0	0	0	0	3	4.55E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216251848	X	66858777	T	C	AR	CCDS14387.1	r.?	-	-	intronic	32	0	0	87	26	29.88505747	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.476673428	0.738336714	2	0	0.01625	0.98375	0	0	0	0	3	1.14E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1216252188	X	69498174	G	C	ARR3	CCDS14399.1	r.?	-	-	intronic	35	0	0	53	9	16.98113208	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.839067703	0.839067703	1	0	0.01	0.99	0	0	0	0	3	7.10E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216252596	X	73016669	T	C	-	-	-	-	-	-	30	0	0	91	20	21.97802198	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.085972851	1.085972851	1	0	0.0025	0.9975	0	0	0	0	3	4.44E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216252602	X	73060935	G	C	-	-	-	-	-	-	32	0	0	96	21	21.875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.080882353	1.080882353	1	0	0	1	0	0	0	0	3	2.61E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216252607	X	73111551	G	C	-	-	-	-	-	-	39	0	0	85	23	27.05882353	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.337024221	1.337024221	1	0	0	1	0	0	0	0	3	3.06E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216252719	X	74194151	G	C	-	-	-	-	-	-	35	0	0	84	19	22.61904762	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.117647059	1.117647059	1	0	0	1	0	0	0	0	3	4.62E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216252838	X	75361871	G	C	-	-	-	-	-	-	16	0	0	39	9	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0.00625	0.99375	0	0	0	0	3	3.62E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216252963	X	76709512	T	C	FGF16	ENST00000439435	r.?	-	-	upstream	36	0	0	61	9	14.75409836	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.729026037	0.729026037	1	0.00125	0.03375	0.965	0	0	0	0	3	2.68E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216253136	X	78144916	T	C	-	-	-	-	-	-	32	0	0	79	16	20.25316456	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.000744602	1.000744602	1	0	0.0025	0.9975	0	0	0	0	3	2.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216253512	X	81137998	T	C	-	-	-	-	-	-	32	0	0	70	13	18.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.917647059	0.917647059	1	0	0.00125	0.99875	0	0	0	0	3	4.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216253670	X	83294146	G	C	-	-	-	-	-	-	27	0	0	86	20	23.25581395	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.149110807	1.149110807	1	0	0	1	0	0	0	0	3	1.27E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216253825	X	84345036	G	C	APOOL	CCDS48138.1	r.?	-	-	downstream	34	0	0	81	17	20.98765432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.037037037	1.037037037	1	0	0	1	0	0	0	0	3	7.24E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216253904	X	85094232	A	C	-	-	-	-	-	-	37	0	0	61	10	16.39344262	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.81002893	0.81002893	1	0.00125	0.0075	0.99125	0	0	0	0	3	6.98E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216254178	X	87352189	A	C	-	-	-	-	-	-	31	0	0	70	14	20	29	0	0	19	5	26.31578947							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0	1	0	0	0	0	3	9.08E-19	1	3.43E-08	1	NA	NA	NA
1353824	PD9772b	1216254287	X	88122637	G	C	-	-	-	-	-	-	40	0	0	73	18	24.65753425	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.21837228	1.21837228	1	0	0	1	0	0	0	0	3	1.62E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216254309	X	88297361	T	C	-	-	-	-	-	-	26	0	0	78	13	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.0025	0.9975	0	0	0	0	3	1.99E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216254663	X	90933693	G	C	-	-	-	-	-	-	39	0	0	96	25	26.04166667	0	0	NA	0	0	NA							4.615834634	2	2	0.384165366	3	2	0.615834634	unphased	1.447138309	0.895598026	1.615834634	0	0	1	0	0	0	0	3	1.59E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216254798	X	92274443	T	C	-	-	-	-	-	-	32	0	0	22	6	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0.00375	0.99625	0	0	0	0	3	1.09E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216254860	X	92733856	A	C	-	-	-	-	-	-	25	0	0	64	11	17.1875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.849264706	0.849264706	1	0	0.00625	0.99375	0	0	0	0	3	2.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216254903	X	93068237	T	C	-	-	-	-	-	-	29	0	0	63	13	20.63492063	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.019607843	1.019607843	1	0	0.00125	0.99875	0	0	0	0	3	1.01E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216254989	X	93864021	A	C	-	-	-	-	-	-	26	0	0	68	14	20.58823529	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.017301038	1.017301038	1	0	0.00375	0.99625	0	0	0	0	3	5.84E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216255022	X	94111780	T	C	-	-	-	-	-	-	30	0	0	87	7	8.045977011	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.397565923	0.397565923	1	0.09125	0.59	0.31875	0	0	0	0	2	3.22E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216255191	X	95199615	G	C	-	-	-	-	-	-	24	0	0	88	19	21.59090909	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06684492	1.06684492	1	0	0	1	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216255259	X	95513462	G	C	-	-	-	-	-	-	43	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0	1	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216255467	X	97296752	T	C	-	-	-	-	-	-	40	0	0	86	14	16.27906977	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.804377565	0.804377565	1	0	0.01125	0.98875	0	0	0	0	3	1.98E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216255580	X	98289237	T	C	-	-	-	-	-	-	29	0	0	69	13	18.84057971	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.930946292	0.930946292	1	0	0.0025	0.9975	0	0	0	0	3	3.64E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216255699	X	99251154	A	C	-	-	-	-	-	-	32	0	0	69	10	14.49275362	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.716112532	0.716112532	1	0	0.03	0.97	0	0	0	0	3	2.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216255703	X	99300773	T	C	-	-	-	-	-	-	44	0	0	68	8	11.76470588	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.581314879	0.581314879	1	0.00375	0.1125	0.88375	0	0	0	0	3	2.21E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216255714	X	99415586	A	C	-	-	-	-	-	-	36	0	0	80	22	27.5	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.358823529	1.358823529	1	0	0	1	0	0	0	0	3	4.89E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216256096	X	102820413	G	C	-	-	-	-	-	-	37	0	0	72	15	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0	1	0	0	0	0	3	2.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216256179	X	103368077	A	C	MCART6	CCDS35363.1	r.?	-	-	intronic	32	0	0	85	25	29.41176471	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.453287197	0.726643599	2	0	0.015	0.985	0	0	0	0	3	4.87E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216256206	X	103549966	G	C	-	-	-	-	-	-	29	0	0	81	14	17.28395062	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.854030501	0.854030501	1	0	0.005	0.995	0	0	0	0	3	8.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216256283	X	104338096	G	C	IL1RAPL2	CCDS14517.1	r.?	-	-	intronic	33	0	0	107	25	23.36448598	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.154480484	1.154480484	1	0	0	1	0	0	0	0	3	3.34E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216256372	X	105352007	G	C	-	-	-	-	-	-	33	0	0	70	14	20	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	9.08E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216256409	X	105749824	T	C	-	-	-	-	-	-	32	0	0	66	15	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0.0025	0.9975	0	0	0	0	3	6.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216256498	X	106544328	G	C	-	-	-	-	-	-	36	0	0	76	12	15.78947368	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.780185759	0.780185759	1	0	0.0125	0.9875	0	0	0	0	3	5.63E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216256725	X	108466375	T	C	-	-	-	-	-	-	27	0	0	74	10	13.51351351	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.66772655	0.66772655	1	0	0.04375	0.95625	0	0	0	0	3	5.24E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216256825	X	109198705	T	C	-	-	-	-	-	-	34	0	0	78	20	25.64102564	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.266968326	1.266968326	1	0	0	1	0	0	0	0	3	1.43E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216256897	X	109697383	T	C	RGAG1	ENST00000465301	r.3784u>c	c.3538T>C	p.L1180L	silent	23	0	0	49	12	24.48979592	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.210084034	1.210084034	1	0	0.00125	0.99875	0	0	0	0	3	1.90E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216256968	X	110332094	T	C	PAK3	CCDS14554.1	r.?	-	-	intronic	32	0	0	67	13	19.40298507	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.958735733	0.958735733	1	0	0.00125	0.99875	0	0	0	0	3	2.41E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216257137	X	112354033	G	C	-	-	-	-	-	-	37	0	0	74	15	20.27027027	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.001589825	1.001589825	1	0	0.00375	0.99625	0	0	0	0	3	4.22E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216257306	X	113692079	G	C	-	-	-	-	-	-	30	0	0	95	22	23.15789474	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.144272446	1.144272446	1	0	0	1	0	0	0	0	3	3.45E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216257339	X	113951077	G	C	HTR2C	CCDS14564.1	r.?	-	-	intronic	39	0	0	84	21	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.15E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216257411	X	114414900	G	C	LRCH2	CCDS48155.1	r.?	-	-	intronic	30	0	0	89	17	19.1011236	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.943820225	0.943820225	1	0	0.0025	0.9975	0	0	0	0	3	4.11E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216257419	X	114448279	G	C	LRCH2	CCDS48155.1	r.?	-	-	intronic	37	0	0	92	23	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	2.41E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216257469	X	114656584	G	C	-	-	-	-	-	-	27	0	0	70	21	30	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.482352941	0.741176471	2	0	0.02625	0.97375	0	0	0	0	3	1.45E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216257717	X	116603810	A	C	-	-	-	-	-	-	29	0	0	88	16	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.0025	0.9975	0	0	0	0	3	1.57E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216257880	X	117899161	A	C	IL13RA1	CCDS14573.1	r.?	-	-	intronic	39	0	0	40	9	22.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.111764706	1.111764706	1	0	0.005	0.995	0	0	0	0	3	4.64E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216257934	X	118234540	A	C	KIAA1210	CCDS48156.1	r.?	-	-	intronic	36	0	0	53	6	11.32075472	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.559378468	0.559378468	1	0.00375	0.08875	0.9075	0	0	0	0	3	2.93E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216258141	X	119925759	G	C	ENSG00000228279	ENST00000439600	r.?	-	-	intronic	25	0	0	59	14	23.72881356	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.172482552	1.172482552	1	0	0	1	0	0	0	0	3	6.58E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216258440	X	122827553	G	C	THOC2	CCDS43988.1	r.?	-	-	intronic	28	0	0	69	14	20.28985507	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.002557545	1.002557545	1	0	0.00125	0.99875	0	0	0	0	3	7.30E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216258703	X	124986449	G	C	-	-	-	-	-	-	32	0	0	77	17	22.07792208	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.090909091	1.090909091	1	0	0	1	0	0	0	0	3	2.82E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216258727	X	125190288	T	C	-	-	-	-	-	-	45	0	0	82	16	19.51219512	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.964131994	0.964131994	1	0	0	1	0	0	0	0	3	4.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216258931	X	126886765	G	C	-	-	-	-	-	-	40	0	0	71	18	25.35211268	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.252692626	1.252692626	1	0	0	1	0	0	0	0	3	9.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216258932	X	126890609	G	C	-	-	-	-	-	-	25	0	0	50	8	16	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0	0.01625	0.98375	0	0	0	0	3	1.74E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216258978	X	127368723	T	C	-	-	-	-	-	-	42	0	0	79	14	17.72151899	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.875651526	0.875651526	1	0	0.00125	0.99875	0	0	0	0	3	5.60E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216259248	X	129844642	T	C	ENOX2	CCDS14626.1	r.?	-	-	intronic	28	0	0	63	10	15.87301587	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.784313725	0.784313725	1	0	0.00875	0.99125	0	0	0	0	3	9.81E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216259410	X	131547903	T	C	MBNL3	CCDS14633.1	r.?	-	-	intronic	43	0	0	61	13	21.31147541	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.053037608	1.053037608	1	0	0	1	0	0	0	0	3	6.41E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216259429	X	131771031	G	C	HS6ST2	CCDS48169.1	r.?	-	-	intronic	24	0	0	95	16	16.84210526	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.832198142	0.832198142	1	0	0.00375	0.99625	0	0	0	0	3	5.80E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216259780	X	135150101	G	C	-	-	-	-	-	-	34	0	0	67	11	16.41791045	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.811237928	0.811237928	1	0	0.01625	0.98375	0	0	0	0	3	4.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216259842	X	135546193	T	C	-	-	-	-	-	-	52	0	0	93	21	22.58064516	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.115749526	1.115749526	1	0	0.00125	0.99875	0	0	0	0	3	1.25E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216259922	X	136188225	G	C	-	-	-	-	-	-	34	0	0	74	13	17.56756757	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.868044515	0.868044515	1	0	0.0025	0.9975	0	0	0	0	3	9.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216260083	X	137428757	T	C	-	-	-	-	-	-	40	0	0	78	15	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0	1	0	0	0	0	3	9.92E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216260213	X	138614568	G	C	F9	CCDS14666.1	r.?	-	-	intronic	40	0	0	82	11	13.41463415	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.662840746	0.662840746	1	0	0.05	0.95	0	0	0	0	3	4.94E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216260440	X	140301305	G	C	-	-	-	-	-	-	36	0	0	69	11	15.94202899	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.787723785	0.787723785	1	0	0.015	0.985	0	0	0	0	3	6.82E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216260623	X	141886268	A	C	-	-	-	-	-	-	26	0	0	82	17	20.73170732	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.024390244	1.024390244	1	0	0	1	0	0	0	0	3	9.09E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216260654	X	142179260	T	C	-	-	-	-	-	-	36	0	0	73	10	13.69863014	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.676873489	0.676873489	1	0.00125	0.0425	0.95625	0	0	0	0	3	4.56E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216260956	X	144673051	G	C	-	-	-	-	-	-	49	0	0	94	31	32.9787234	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.629536921	0.814768461	2	0	0.00625	0.99375	0	0	0	0	3	2.29E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1216260987	X	144938218	A	C	-	-	-	-	-	-	35	0	0	93	19	20.43010753	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.009487666	1.009487666	1	0	0.00125	0.99875	0	0	0	0	3	3.86E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216261005	X	145146161	A	C	-	-	-	-	-	-	37	0	0	54	10	18.51851852	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.0075	0.9925	0	0	0	0	3	1.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216261025	X	145390505	T	C	-	-	-	-	-	-	31	0	0	66	12	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.00125	0.99875	0	0	0	0	3	9.36E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216261336	X	147975675	G	C	AFF2	CCDS14684.1	r.?	-	-	intronic	27	0	0	78	22	28.20512821	213	0	0	119	29	24.3697479							5	3	2	1	NA	NA	NA	unphased	1.67571644	0.83785822	2	0	0.00375	0.99625	0	0	0	0	3	2.58E-32	1	5.11E-40	1	YES	somatic	1_1
1353824	PD9772b	1216261374	X	148338797	G	C	-	-	-	-	-	-	49	0	0	71	10	14.08450704	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.836785418	0.836785418	1	0	0.01	0.99	0	0	0	0	3	3.42E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216261563	X	149774520	G	C	MTM1	CCDS14694.1	r.?	-	-	intronic	32	0	0	104	36	34.61538462	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.056561086	1.028280543	2	0	0	1	0	0	0	0	3	1.17E-55	1	1	1	NA	NA	NA
1353824	PD9772b	1216261607	X	150191692	G	C	-	-	-	-	-	-	29	0	0	91	25	27.47252747	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.632191338	0.816095669	2	0	0.00375	0.99625	0	0	0	0	3	3.47E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216261763	X	151307835	G	C	MAGEA10	CCDS14705.1	r.?	-	-	upstream	31	0	0	70	23	32.85714286	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.95210084	0.97605042	2	0	0	1	0	0	0	0	3	1.70E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216261788	X	151557218	T	C	GABRA3	CCDS14706.1	r.?	-	-	intronic	39	0	0	87	23	26.43678161	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.570655849	0.785327924	2	0	0.0025	0.9975	0	0	0	0	3	5.63E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216261812	X	151818535	G	C	GABRQ	CCDS14707.1	r.?	-	-	intronic	29	0	0	73	20	27.39726027	248	0	0	112	15	13.39285714							5	3	2	1	NA	NA	NA	unphased	1.627719581	0.81385979	2	0	0.0025	0.9975	0	0	0	0	3	3.18E-29	1	3.04E-17	1	YES	somatic	1_1
1353824	PD9772b	1216261840	X	152092824	A	C	ZNF185	CCDS48184.1	r.?	-	-	intronic	36	0	0	50	12	24	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.425882353	1.425882353	1	0	0	1	0	0	0	0	3	2.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216262084	X	154739454	G	C	TMLHE	CCDS14768.1	r.?	-	-	intronic	28	0	0	100	22	22	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.307058824	1.307058824	1	0	0	1	0	0	0	0	3	1.20E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215834641	1	1043645	A	G	C1orf159	CCDS7.2	r.?	-	-	intronic	20	0	0	7	3	42.85714286	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.894561708	0.894561708	1	0.00125	0.0125	0.98625	0	0	0	0	3	4.31E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215834854	1	2942358	T	G	ACTRT2	CCDS45.1	r.?	-	-	downstream	23	0	0	81	16	19.75308642	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.412308277	0.412308277	1	0.065	0.92	0.015	0	0	0	0	2	3.77E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215835394	1	7476723	A	G	CAMTA1	CCDS30576.1	r.?	-	-	intronic	40	0	0	82	16	19.51219512	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.407280127	0.407280127	1	0.09125	0.89875	0.01	0	0	0	0	2	4.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215835534	1	8594028	C	G	RERE	CCDS41243.1	r.?	-	-	intronic	37	0	0	73	8	10.95890411	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.228746373	1.565317364	0.146134182	0	0.0025	0.9975	0	0	0	0	3	3.93E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215835579	1	8894808	C	G	-	-	-	-	-	-	19	0	0	20	3	15	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.313096598	0.313096598	1	0.15	0.50875	0.34125	0	0	0	0	2	0.0001337	1	1	1	NA	NA	NA
1353824	PD9772b	1215835640	1	9406234	C	G	SPSB1	CCDS102.1	r.?	-	-	intronic	39	0	0	46	22	47.82608696	181	0	0	18	6	33.33333333							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.998279008	0.998279008	1	0	0	1	0	0	0	0	3	1.68E-38	1	2.75E-10	1	NA	NA	NA
1353824	PD9772b	1215835724	1	10075398	C	G	RBP7	CCDS109.1	r.?	-	-	intronic	20	0	0	33	10	30.3030303	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.63251838	0.63251838	1	0.0025	0.12375	0.87375	0	0	0	0	3	8.14E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215835825	1	11008899	C	G	C1orf127	ENST00000377008	r.797g>c	c.792G>C	p.K264N	missense	38	0	0	12	4	33.33333333	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.695770218	0.695770218	1	0	0.03875	0.96125	0	0	0	0	3	3.00E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215836458	1	15307781	A	G	ENSG00000189337	CCDS152.2	r.?	-	-	intronic	35	0	0	24	5	20.83333333	281	0	0	28	4	14.28571429							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.434856386	0.434856386	1	0.045	0.4175	0.5375	0	0	0	0	3	1.23E-07	1	1.16E-05	1	NA	NA	NA
1353824	PD9772b	1215836592	1	16491255	T	G	-	-	-	-	-	-	31	0	0	27	4	14.81481481	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.309231208	0.309231208	1	0.2175	0.63125	0.15125	0	0	0	0	2	1.00E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215838057	1	24743378	A	G	C1orf201	CCDS253.1	r.?	-	-	upstream	35	0	0	61	30	49.18032787	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	1.026546223	1.026546223	1	0	0	1	0	0	0	0	3	1.86E-52	1	1	1	NA	NA	NA
1353824	PD9772b	1215838080	1	24933767	C	G	C1orf130	CCDS30632.1	r.1904c>g	c.?	p.?	3'UTR variant	40	0	0	27	8	29.62962963	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.167755991	1.167755991	1	0	0.0025	0.9975	0	0	0	0	3	7.97E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215838150	1	25822995	C	G	TMEM57	CCDS30638.1	r.?	-	-	intronic	38	0	0	49	7	14.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.56302521	0.56302521	1	0.00375	0.125	0.87125	0	0	0	0	3	5.58E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215838252	1	27135216	T	G	-	-	-	-	-	-	30	0	0	56	17	30.35714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.196428571	1.196428571	1	0	0	1	0	0	0	0	3	6.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215838594	1	31211446	A	G	LAPTM5	CCDS337.1	r.?	-	-	intronic	42	0	0	54	11	20.37037037	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.59912854	0.59912854	1	0.00125	0.1525	0.84625	0	0	0	0	3	3.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215838637	1	31582592	T	G	-	-	-	-	-	-	34	0	0	37	5	13.51351351	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.39745628	0.39745628	1	0.0575	0.44125	0.50125	0	0	0	0	3	1.19E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215838742	1	32115793	A	G	COL16A1	CCDS41297.1	r.?	-	-	downstream	25	0	0	63	11	17.46031746	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.513538749	0.513538749	1	0.02	0.4775	0.5025	0	0	0	0	3	2.37E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215838785	1	32623533	C	G	KPNA6	CCDS352.1	r.?	-	-	intronic	32	0	0	90	25	27.77777778	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.816993464	0.816993464	1	0	0.0025	0.9975	0	0	0	0	3	2.53E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215839003	1	34146251	C	G	CSMD2	CCDS380.1	r.?	-	-	intronic	35	0	0	41	9	21.95121951	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.645624103	0.645624103	1	0.00125	0.07	0.92875	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215839571	1	38992757	C	G	-	-	-	-	-	-	36	0	0	65	10	15.38461538	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.452488688	0.452488688	1	0.03875	0.67	0.29125	0	0	0	0	2	1.36E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215839653	1	39647149	C	G	MACF1	CCDS435.1	r.?	-	-	intronic	30	0	0	58	9	15.51724138	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.456389452	0.456389452	1	0.035	0.61125	0.35375	0	0	0	0	2	1.67E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215839915	1	41620744	T	G	SCMH1	CCDS30688.1	r.?	-	-	intronic	41	0	0	88	11	12.5	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.367647059	0.367647059	1	0.16625	0.81375	0.02	0	0	0	0	2	1.10E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215840066	1	42962551	A	G	CCDC30	ENST00000507855	r.?	-	-	intronic	39	0	0	72	23	31.94444444	0	0	NA	0	0	NA							3.163947922	2	1	0.836052078	3	1	0.163947922	unphased	1.311359181	1.311359181	1	0	0	1	0	0	0	0	3	3.67E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215840561	1	47066944	C	G	MKNK1	CCDS538.1	r.?	-	-	intronic	27	0	0	60	6	10	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.494117647	0.494117647	1	0.01	0.19125	0.79875	0	0	0	0	3	6.21E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215840738	1	48841695	A	G	SPATA6	CCDS551.1	r.?	-	-	intronic	40	0	0	61	11	18.03278689	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.891031823	0.891031823	1	0	0	1	0	0	0	0	3	1.62E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215840820	1	49636017	A	G	AGBL4	CCDS44137.1	r.?	-	-	intronic	28	0	0	41	12	29.26829268	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.446197991	1.446197991	1	0	0	1	0	0	0	0	3	1.69E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215840821	1	49643090	T	G	AGBL4	CCDS44137.1	r.?	-	-	intronic	39	0	0	78	19	24.35897436	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.20361991	1.20361991	1	0	0	1	0	0	0	0	3	9.67E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215840922	1	50778109	C	G	-	-	-	-	-	-	40	0	0	85	14	16.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.81384083	0.81384083	1	0	0.0075	0.9925	0	0	0	0	3	1.66E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215841020	1	51599093	C	G	C1orf185	CCDS44142.1	r.?	-	-	intronic	36	0	0	76	15	19.73684211	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0.0025	0.9975	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215841517	1	55821238	C	G	-	-	-	-	-	-	37	0	0	72	10	13.88888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.68627451	0.68627451	1	0	0.05125	0.94875	0	0	0	0	3	3.95E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215841620	1	56890221	C	G	-	-	-	-	-	-	37	0	0	60	10	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01	0.99	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215841682	1	57298231	A	G	-	-	-	-	-	-	29	0	0	82	19	23.17073171	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.144906743	1.144906743	1	0	0	1	0	0	0	0	3	2.79E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215841741	1	57707800	A	G	DAB1	CCDS607.1	r.?	-	-	intronic	34	0	0	71	13	18.30985915	202	0	0	330	69	20.90909091							4	2	2	1	NA	NA	NA	unphased	0.904722452	0.904722452	1	0	0.005	0.995	0	0	0	0	3	5.42E-17	1	7.70E-88	1	YES	somatic	1_1
1353824	PD9772b	1215841761	1	57940671	C	G	DAB1	CCDS607.1	r.?	-	-	intronic	38	0	0	52	12	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	4.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215842188	1	61223764	A	G	-	-	-	-	-	-	30	0	0	78	16	20.51282051	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.013574661	1.013574661	1	0	0.00125	0.99875	0	0	0	0	3	1.96E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215842203	1	61385350	T	G	NFIA	ENST00000371191	r.?	-	-	intronic	33	0	0	76	9	11.84210526	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.585139319	0.585139319	1	0	0.11125	0.88875	0	0	0	0	3	2.06E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215842567	1	63664246	A	G	-	-	-	-	-	-	38	0	0	70	11	15.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.776470588	0.776470588	1	0	0.02125	0.97875	0	0	0	0	3	8.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215842569	1	63685878	A	G	-	-	-	-	-	-	34	0	0	82	14	17.07317073	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.843615495	0.843615495	1	0	0.0075	0.9925	0	0	0	0	3	9.77E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215842694	1	64606944	A	G	ROR1	CCDS626.1	r.?	-	-	intronic	35	0	0	92	15	16.30434783	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.805626598	0.805626598	1	0	0.00875	0.99125	0	0	0	0	3	1.39E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215843656	1	73247633	T	G	-	-	-	-	-	-	45	0	0	21	7	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.00125	0.99875	0	0	0	0	3	8.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215843762	1	74330641	A	G	-	-	-	-	-	-	40	0	0	59	12	20.33898305	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.801595214	0.801595214	1	0	0.00875	0.99125	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215843895	1	75813104	T	G	SLC44A5	CCDS667.1	r.?	-	-	intronic	44	0	0	58	17	29.31034483	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.155172414	1.155172414	1	0	0	1	0	0	0	0	3	1.24E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215844002	1	76842065	A	G	ST6GALNAC3	CCDS672.1	r.?	-	-	intronic	26	0	0	64	15	23.4375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.923713235	0.923713235	1	0	0.00375	0.99625	0	0	0	0	3	3.87E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215844204	1	78890540	C	G	PTGFR	CCDS686.1	r.?	-	-	intronic	33	0	0	66	19	28.78787879	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.134581105	1.134581105	1	0	0	1	0	0	0	0	3	2.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215844340	1	80392583	T	G	-	-	-	-	-	-	47	0	0	60	9	15	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.591176471	0.591176471	1	0.0025	0.10125	0.89625	0	0	0	0	3	2.29E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215844602	1	82828677	A	G	-	-	-	-	-	-	37	0	0	60	9	15	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.591176471	0.591176471	1	0.005	0.115	0.88	0	0	0	0	3	2.29E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215845158	1	87828889	C	G	-	-	-	-	-	-	36	0	0	56	18	32.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.266806723	1.266806723	1	0	0	1	0	0	0	0	3	6.76E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215845214	1	88476337	A	G	-	-	-	-	-	-	38	0	0	55	8	14.54545455	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.573262032	0.573262032	1	0.00625	0.12375	0.87	0	0	0	0	3	3.86E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215845291	1	89358430	T	G	GTF2B	CCDS715.1	r.?	-	-	upstream	34	0	0	25	6	24	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.945882353	0.945882353	1	0	0.005	0.995	0	0	0	0	3	2.55E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215845377	1	90256431	C	G	-	-	-	-	-	-	36	0	0	77	20	25.97402597	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.0236822	1.0236822	1	0	0	1	0	0	0	0	3	1.07E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215845542	1	91859492	C	G	HFM1	CCDS30769.2	r.?	-	-	intronic	36	0	0	72	12	16.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.656862745	0.656862745	1	0.00125	0.0575	0.94125	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215845763	1	94250576	C	G	BCAR3	CCDS745.1	r.?	-	-	intronic	30	0	0	62	20	32.25806452	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.271347249	1.271347249	1	0	0	1	0	0	0	0	3	7.19E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215846695	1	104028799	C	G	-	-	-	-	-	-	34	0	0	69	24	34.7826087	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.37084399	0.685421995	2	0	0.0675	0.9325	0	0	0	0	3	1.11E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1215846756	1	104903726	C	G	-	-	-	-	-	-	47	0	0	66	20	30.3030303	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.1942959	1.1942959	1	0	0	1	0	0	0	0	3	3.11E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215846992	1	106964592	C	G	-	-	-	-	-	-	39	0	0	56	17	30.35714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.196428571	1.196428571	1	0	0	1	0	0	0	0	3	6.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215847315	1	111036440	C	G	-	-	-	-	-	-	30	0	0	39	9	23.07692308	2	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.909502262	0.909502262	1	0	0.00375	0.99625	0	0	0	0	3	3.62E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215847515	1	113453343	A	G	SLC16A1	CCDS858.1	r.?	-	-	downstream	36	0	0	63	16	25.3968254	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.000933707	1.000933707	1	0	0.0025	0.9975	0	0	0	0	3	4.48E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215847677	1	115515514	A	G	SYCP1	CCDS879.1	r.?	-	-	intronic	42	0	0	77	35	45.45454545	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.79144385	0.895721925	2	0	0	1	0	0	0	0	3	2.37E-59	1	1	1	NA	NA	NA
1353824	PD9772b	1215848426	1	120788102	C	G	-	-	-	-	-	-	29	0	0	16	5	31.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.231617647	1.231617647	1	0	0.0075	0.9925	0	0	0	0	3	1.30E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215856095	1	144704179	T	G	-	-	-	-	-	-	42	0	0	73	10	13.69863014	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.676873489	0.676873489	1	0	0.04125	0.95875	0	0	0	0	3	4.56E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215856780	1	146893407	C	G	-	-	-	-	-	-	33	0	0	42	10	23.80952381	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.176470588	1.176470588	1	0	0.0025	0.9975	0	0	0	0	3	1.24E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215858590	1	150587846	C	G	AL356356.3	ENST00000499705	r.115g>c	-	-	non-coding variant	25	0	0	63	13	20.63492063	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.019607843	1.019607843	1	0	0	1	0	0	0	0	3	1.01E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215858871	1	152705068	C	G	-	-	-	-	-	-	43	0	0	14	3	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0.00125	0.0225	0.97625	0	0	0	0	3	4.37E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215858920	1	153048172	T	G	SPRR2B	CCDS30865.1	r.?	-	-	upstream	43	0	0	81	18	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	1.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215858933	1	153175888	C	G	LELP1	CCDS30869.1	r.?	-	-	upstream	35	0	0	75	9	12	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.592941176	0.592941176	1	0	0.1075	0.8925	0	0	0	0	3	1.82E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215859034	1	153787721	C	G	GATAD2B	CCDS1054.1	r.?	-	-	intronic	22	0	0	56	7	12.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.617647059	0.617647059	1	0.00625	0.0725	0.92125	0	0	0	0	3	1.46E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215859537	1	157988790	T	G	KIRREL	CCDS1172.2	r.?	-	-	intronic	32	0	0	77	14	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0	1	0	0	0	0	3	3.82E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215859723	1	159484148	A	G	-	-	-	-	-	-	32	0	0	82	12	14.63414634	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.723098996	0.723098996	1	0.00125	0.02875	0.97	0	0	0	0	3	1.46E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215860956	1	168425589	T	G	-	-	-	-	-	-	38	0	0	87	20	22.98850575	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.135902637	1.135902637	1	0	0	1	0	0	0	0	3	1.65E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215861460	1	172661847	C	G	-	-	-	-	-	-	37	0	0	87	26	29.88505747	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.476673428	0.738336714	2	0	0.01125	0.98875	0	0	0	0	3	1.14E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215861715	1	174867706	A	G	RABGAP1L	CCDS1314.1	r.?	-	-	intronic	35	0	0	70	14	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0	1	0	0	0	0	3	9.08E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215861842	1	175700509	A	G	TNR	CCDS1318.1	r.?	-	-	intronic	37	0	0	63	9	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0	0.035	0.965	0	0	0	0	3	3.62E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215861923	1	176232069	C	G	-	-	-	-	-	-	25	0	0	77	20	25.97402597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.28342246	1.28342246	1	0	0	1	0	0	0	0	3	1.07E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215862036	1	177323728	T	G	-	-	-	-	-	-	48	0	0	63	17	26.98412698	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.333333333	1.333333333	1	0	0.00125	0.99875	0	0	0	0	3	6.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215862152	1	178181639	T	G	RASAL2	CCDS1321.1	r.?	-	-	intronic	31	0	0	53	13	24.52830189	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.211986681	1.211986681	1	0	0.00125	0.99875	0	0	0	0	3	8.53E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215862257	1	178977417	A	G	-	-	-	-	-	-	15	0	0	39	7	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.01	0.99	0	0	0	0	3	1.04E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215862289	1	179152153	T	G	ABL2	CCDS44283.1	r.?	-	-	intronic	32	0	0	76	19	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	5.56E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215862397	1	179706152	A	G	-	-	-	-	-	-	37	0	0	78	19	24.35897436	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.20361991	1.20361991	1	0	0	1	0	0	0	0	3	9.67E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215862471	1	180143114	C	G	QSOX1	CCDS1337.1	r.?	-	-	intronic	33	0	0	42	11	26.19047619	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.294117647	1.294117647	1	0	0	1	0	0	0	0	3	1.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215862639	1	181282484	C	G	-	-	-	-	-	-	38	0	0	63	8	12.6984127	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.62745098	0.62745098	1	0.00125	0.0675	0.93125	0	0	0	0	3	1.18E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215862667	1	181531694	A	G	CACNA1E	ENST00000367573	r.?	-	-	intronic	34	0	0	77	8	10.38961039	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.513368984	0.513368984	1	0.01875	0.24375	0.7375	0	0	0	0	3	6.05E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215862859	1	182975279	C	G	-	-	-	-	-	-	20	0	0	14	3	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0.0025	0.0175	0.98	0	0	0	0	3	4.37E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215862902	1	183286789	C	G	NMNAT2	CCDS1353.1	r.?	-	-	intronic	30	0	0	64	5	7.8125	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.386029412	0.386029412	1	0.06625	0.38625	0.5475	0	0	0	0	3	1.86E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215862984	1	183815476	A	G	RGL1	CCDS1359.1	r.?	-	-	intronic	26	0	0	77	18	23.37662338	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.155080214	1.155080214	1	0	0	1	0	0	0	0	3	4.71E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215863200	1	185860634	C	G	HMCN1	CCDS30956.1	r.?	-	-	intronic	18	0	0	44	12	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	4.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215863265	1	186403483	T	G	-	-	-	-	-	-	42	0	0	86	12	13.95348837	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.689466484	0.689466484	1	0	0.03125	0.96875	0	0	0	0	3	2.65E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215863351	1	187072669	C	G	-	-	-	-	-	-	37	0	0	88	5	5.681818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.280748663	0.280748663	1	0.3	0.63	0.07	0	0	0	0	2	8.67E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215863773	1	190161750	C	G	FAM5C	CCDS1373.1	r.?	-	-	intronic	42	0	0	89	18	20.2247191	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.999339061	0.999339061	1	0	0.00125	0.99875	0	0	0	0	3	8.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215864044	1	192383126	C	G	-	-	-	-	-	-	40	0	0	55	8	14.54545455	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.718716578	0.718716578	1	0	0.03125	0.96875	0	0	0	0	3	3.86E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215864059	1	192484064	A	G	-	-	-	-	-	-	36	0	0	55	5	9.090909091	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.449197861	0.449197861	1	0.0175	0.22875	0.75375	0	0	0	0	3	8.83E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215864320	1	194221905	T	G	-	-	-	-	-	-	28	0	0	63	9	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0	0.03625	0.96375	0	0	0	0	3	3.62E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215864541	1	195818871	A	G	-	-	-	-	-	-	41	0	0	85	18	21.17647059	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.046366782	1.046366782	1	0	0	1	0	0	0	0	3	3.35E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215864565	1	196011591	A	G	-	-	-	-	-	-	52	0	0	77	19	24.67532468	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.219251337	1.219251337	1	0	0	1	0	0	0	0	3	7.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215864982	1	198954360	T	G	-	-	-	-	-	-	36	0	0	62	15	24.19354839	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.19544592	1.19544592	1	0	0	1	0	0	0	0	3	2.28E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215865065	1	199666719	C	G	-	-	-	-	-	-	35	0	0	89	12	13.48314607	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.666226041	0.666226041	1	0	0.03875	0.96125	0	0	0	0	3	4.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215865178	1	200341468	C	G	C1orf98	ENST00000367355	r.?	-	-	intronic	30	0	0	70	12	17.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.847058824	0.847058824	1	0	0.00625	0.99375	0	0	0	0	3	1.99E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215865257	1	200853544	A	G	-	-	-	-	-	-	32	0	0	62	12	19.35483871	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.956356736	0.956356736	1	0	0.00375	0.99625	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215865280	1	201112952	T	G	TMEM9	CCDS1408.1	r.912a>c	c.395A>C	p.N132T	missense	44	0	0	15	4	26.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0.00125	0.00375	0.995	0	0	0	0	3	8.16E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215865676	1	203946981	T	G	-	-	-	-	-	-	40	0	0	95	15	15.78947368	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.780185759	0.780185759	1	0	0.01625	0.98375	0	0	0	0	3	2.31E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215866053	1	207073875	T	G	FAIM3	CCDS1473.1	r.?	-	-	downstream	35	0	0	32	5	15.625	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.772058824	0.772058824	1	0.0025	0.0225	0.975	0	0	0	0	3	5.62E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215866133	1	207793760	A	G	CR1	CCDS44308.1	r.?	-	-	intronic	23	0	0	71	14	19.71830986	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.974316487	0.974316487	1	0	0.00125	0.99875	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215866288	1	209100060	T	G	-	-	-	-	-	-	34	0	0	79	19	24.05063291	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.188384214	1.188384214	1	0	0	1	0	0	0	0	3	1.27E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215866395	1	209969160	A	G	IRF6	CCDS1492.1	r.?	-	-	intronic	48	0	0	87	19	21.83908046	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.079107505	1.079107505	1	0	0	1	0	0	0	0	3	9.64E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215867167	1	214488426	A	G	SMYD2	CCDS31022.1	r.?	-	-	intronic	35	0	0	106	14	13.20754717	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.784683685	0.784683685	1	0	0.015	0.985	0	0	0	0	3	4.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215867495	1	216707488	C	G	ESRRG	CCDS1517.1	r.?	-	-	intronic	30	0	0	97	13	13.40206186	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.796240146	0.796240146	1	0	0.015	0.985	0	0	0	0	3	3.85E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215867666	1	217568411	A	G	-	-	-	-	-	-	33	0	0	77	18	23.37662338	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.388846448	1.388846448	1	0	0	1	0	0	0	0	3	4.71E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215868687	1	223870417	T	G	-	-	-	-	-	-	18	0	0	91	6	6.593406593	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.391725921	0.391725921	1	0.07625	0.46375	0.46	0	0	0	0	2	7.24E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215868901	1	224664430	C	G	-	-	-	-	-	-	40	0	0	79	8	10.12658228	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.601638124	0.601638124	1	0.0025	0.0825	0.915	0	0	0	0	3	7.43E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215869569	1	229072967	C	G	-	-	-	-	-	-	27	0	0	17	7	41.17647059	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.858131488	0.952710496	3	0	0.01	0.99	0	0	0	0	3	1.45E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215869760	1	229974485	C	G	-	-	-	-	-	-	37	0	0	87	37	42.52873563	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.951994591	0.983998197	3	0	0	1	0	0	0	0	3	2.87E-61	1	1	1	NA	NA	NA
1353824	PD9772b	1215870058	1	231556566	A	G	EGLN1	CCDS1595.1	r.?	-	-	intronic	34	0	0	63	22	34.92063492	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.423902894	0.807967631	3	0	0	1	0	0	0	0	3	1.03E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215870269	1	232793974	A	G	-	-	-	-	-	-	34	0	0	125	10	8	2	0	0	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.555294118	0.555294118	1	0.00375	0.18125	0.815	0	0	0	0	3	1.03E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215870343	1	233327019	C	G	PCNXL2	CCDS44335.1	r.?	-	-	intronic	46	0	0	110	45	40.90909091	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	2.430481283	0.810160428	3	0	0	1	0	0	0	0	3	3.33E-73	1	1	1	NA	NA	NA
1353824	PD9772b	1215870392	1	233670732	T	G	-	-	-	-	-	-	33	0	0	123	74	60.16260163	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	3.574366332	0.893591583	4	0	0	1	0	0	0	0	3	2.51E-136	1	1	1	NA	NA	NA
1353824	PD9772b	1215870905	1	236294230	T	G	-	-	-	-	-	-	27	0	0	52	7	13.46153846	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	0.799773756	0.799773756	1	0	0.02375	0.97625	0	0	0	0	3	8.58E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215871475	1	238755219	A	G	-	-	-	-	-	-	38	0	0	99	17	17.17171717	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	1.02020202	1.02020202	1	0	0.00125	0.99875	0	0	0	0	3	2.86E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215871814	1	240179404	A	G	FMN2	ENST00000447095	r.?	-	-	intronic	36	0	0	150	22	14.66666667	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	1.458039216	0.729019608	2	0	0.02	0.98	0	0	0	0	3	1.70E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215871825	1	240202152	T	G	FMN2	ENST00000447095	r.?	-	-	intronic	40	0	0	128	76	59.375	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	5.902573529	0.983762255	6	0	0	1	0	0	0	0	3	2.59E-139	1	1	1	NA	NA	NA
1353824	PD9772b	1215871865	1	240334173	T	G	FMN2	CCDS31069.2	r.?	-	-	intronic	26	0	0	109	15	13.76146789	0	0	NA	2	0	0							9	7	2	1	NA	NA	NA	unphased	1.368051808	1.368051808	1	0	0	1	0	0	0	0	3	1.99E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215872010	1	240670097	A	G	GREM2	CCDS31070.1	r.?	-	-	intronic	37	0	0	158	15	9.493670886	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	0.943782576	0.943782576	1	0	0.00125	0.99875	0	0	0	0	3	5.74E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215872067	1	240818895	C	G	-	-	-	-	-	-	32	0	0	49	7	14.28571429	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	1.420168067	1.420168067	1	0	0.00125	0.99875	0	0	0	0	3	5.58E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215872215	1	241253573	A	G	RGS7	CCDS31071.1	r.?	-	-	intronic	35	0	0	101	72	71.28712871	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	7.086779266	1.012397038	7	0	0	1	0	0	0	0	3	3.19E-141	1	1	1	NA	NA	NA
1353824	PD9772b	1215872521	1	242101270	T	G	-	-	-	-	-	-	26	0	0	94	9	9.574468085	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	0.951814768	0.951814768	1	0	0.00625	0.99375	0	0	0	0	3	1.42E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215872879	1	242879739	C	G	-	-	-	-	-	-	33	0	0	113	13	11.50442478	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.798542426	0.798542426	1	0	0.0125	0.9875	0	0	0	0	3	2.94E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215873206	1	244547936	C	G	C1orf100	CCDS31079.1	r.?	-	-	intronic	19	0	0	61	31	50.81967213	0	0	NA	1	0	0							6	4	2	1	NA	NA	NA	unphased	3.527483124	0.881870781	4	0	0	1	0	0	0	0	3	9.37E-55	1	1	1	NA	NA	NA
1353824	PD9772b	1215873817	1	246772866	C	G	CNST	CCDS1628.1	r.?	-	-	intronic	42	0	0	51	23	45.09803922	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	3.130334487	1.043444829	3	0	0	1	0	0	0	0	3	2.05E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1215874392	1	249138992	C	G	ZNF672	CCDS1638.1	r.?	-	-	intronic	26	0	0	44	7	15.90909091	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.104278075	1.104278075	1	0	0.0125	0.9875	0	0	0	0	3	2.55E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215874393	1	249158142	C	G	ZNF692	CCDS31127.1	r.?	-	-	upstream	26	0	0	56	9	16.07142857	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.115546218	1.115546218	1	0	0.0025	0.9975	0	0	0	0	3	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215874551	10	634211	C	G	DIP2C	CCDS7054.1	r.?	-	-	intronic	29	0	0	15	5	33.33333333	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	1.647058824	1	0	0.00375	0.99625	0	0	0	0	3	9.00E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215874640	10	1422507	C	G	ADARB2	CCDS7058.1	r.?	-	-	intronic	41	0	0	50	14	28	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.383529412	1.383529412	1	0	0	1	0	0	0	0	3	4.84E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215874687	10	1771905	C	G	ADARB2	CCDS7058.1	r.?	-	-	intronic	33	0	0	72	18	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215875233	10	5356033	C	G	-	-	-	-	-	-	30	0	0	76	14	18.42105263	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.910216718	0.910216718	1	0	0.0025	0.9975	0	0	0	0	3	3.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215875238	10	5398307	C	G	-	-	-	-	-	-	31	0	0	86	17	19.76744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976744186	0.976744186	1	0	0.00125	0.99875	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215875525	10	7097226	A	G	-	-	-	-	-	-	32	0	0	74	13	17.56756757	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.868044515	0.868044515	1	0	0.005	0.995	0	0	0	0	3	9.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215875768	10	8682577	C	G	-	-	-	-	-	-	44	0	0	79	9	11.39240506	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.562918838	0.562918838	1	0.00625	0.15625	0.8375	0	0	0	0	3	2.93E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215876591	10	14215844	C	G	FRMD4A	CCDS7101.1	r.?	-	-	intronic	35	0	0	33	6	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.01625	0.98375	0	0	0	0	3	1.54E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215877164	10	18288329	T	G	SLC39A12	CCDS44362.1	r.?	-	-	intronic	35	0	0	50	11	22	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.087058824	1.087058824	1	0	0.005	0.995	0	0	0	0	3	1.52E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215877617	10	21174357	A	G	NEBL	CCDS7134.1	r.?	-	-	intronic	37	0	0	79	11	13.92405063	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.688011914	0.688011914	1	0	0.0475	0.9525	0	0	0	0	3	3.23E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215877726	10	21838307	A	G	MLLT10	CCDS7135.1	r.?	-	-	intronic	35	0	0	42	11	26.19047619	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.294117647	1.294117647	1	0	0	1	0	0	0	0	3	1.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215877923	10	23698625	T	G	ENSG00000224148	ENST00000451785	r.?	-	-	intronic	24	0	0	57	10	17.54385965	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.866873065	0.866873065	1	0.00125	0.00625	0.9925	0	0	0	0	3	3.40E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215877948	10	23930148	C	G	-	-	-	-	-	-	33	0	0	63	19	30.15873016	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.490196078	0.745098039	2	0	0.01	0.99	0	0	0	0	3	9.48E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215877961	10	24078308	C	G	KIAA1217	CCDS41496.1	r.?	-	-	intronic	42	0	0	76	24	31.57894737	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.560371517	0.780185759	2	0	0.00125	0.99875	0	0	0	0	3	1.75E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215877984	10	24229823	C	G	KIAA1217	CCDS41496.1	r.?	-	-	intronic	32	0	0	89	12	13.48314607	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.666226041	0.666226041	1	0	0.05375	0.94625	0	0	0	0	3	4.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215878338	10	26520705	T	G	GAD2	CCDS7149.1	r.?	-	-	intronic	38	0	0	94	17	18.08510638	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.893617021	0.893617021	1	0	0.00125	0.99875	0	0	0	0	3	1.12E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215878347	10	26619359	A	G	-	-	-	-	-	-	48	0	0	62	11	17.74193548	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.876660342	0.876660342	1	0	0.005	0.995	0	0	0	0	3	1.96E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215878531	10	27635686	C	G	-	-	-	-	-	-	35	0	0	74	12	16.21621622	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.80127186	0.80127186	1	0	0.0075	0.9925	0	0	0	0	3	4.02E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215878691	10	28685500	A	G	-	-	-	-	-	-	34	0	0	69	10	14.49275362	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.716112532	0.716112532	1	0	0.02625	0.97375	0	0	0	0	3	2.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215879784	10	36217558	A	G	-	-	-	-	-	-	40	0	0	81	10	12.34567901	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.610021786	0.610021786	1	0	0.095	0.905	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215879991	10	37753726	T	G	-	-	-	-	-	-	35	0	0	51	8	15.68627451	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.775086505	0.775086505	1	0	0.02	0.98	0	0	0	0	3	2.05E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215882463	10	42603692	T	G	-	-	-	-	-	-	37	0	0	61	15	24.59016393	0	0	NA	0	0	NA							4.426998142	2	2	0.573001858	3	2	0.426998142	unphased	1.320042937	1.320042937	1	0	0.00125	0.99875	0	0	0	0	3	1.73E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215884670	10	47358819	A	G	-	-	-	-	-	-	42	0	0	109	11	10.09174312	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.397733405	0.397733405	1	0.11875	0.80125	0.08	0	0	0	0	2	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215884797	10	48998423	C	G	-	-	-	-	-	-	28	0	0	59	15	25.42372881	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.001994018	1.001994018	1	0	0.00125	0.99875	0	0	0	0	3	9.90E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215885030	10	52692259	T	G	-	-	-	-	-	-	30	0	0	60	9	15	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.591176471	0.591176471	1	0.00125	0.115	0.88375	0	0	0	0	3	2.29E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215885730	10	59130843	A	G	-	-	-	-	-	-	37	0	0	69	20	28.98550725	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.142369991	1.142369991	1	0	0	1	0	0	0	0	3	8.73E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215885868	10	60219264	C	G	-	-	-	-	-	-	32	0	0	75	24	32	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.261176471	1.261176471	1	0	0	1	0	0	0	0	3	1.20E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215886100	10	62285087	T	G	ANK3	ENST00000373827	r.?	-	-	intronic	31	0	0	87	15	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0	0.00375	0.99625	0	0	0	0	3	5.73E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215886223	10	63362422	C	G	-	-	-	-	-	-	26	0	0	71	14	19.71830986	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.974316487	0.974316487	1	0	0.005	0.995	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215886311	10	64064205	C	G	-	-	-	-	-	-	32	0	0	23	3	13.04347826	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.644501279	0.644501279	1	0.0025	0.05125	0.94625	0	0	0	0	3	0.000205387	1	1	1	NA	NA	NA
1353824	PD9772b	1215886353	10	64479217	C	G	-	-	-	-	-	-	29	0	0	78	17	21.79487179	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.076923077	1.076923077	1	0	0.00125	0.99875	0	0	0	0	3	3.59E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215886478	10	65376509	T	G	REEP3	CCDS44411.1	r.?	-	-	intronic	35	0	0	72	19	26.38888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.303921569	1.303921569	1	0	0.00125	0.99875	0	0	0	0	3	1.75E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215886611	10	66526706	A	G	-	-	-	-	-	-	44	0	0	78	9	11.53846154	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.570135747	0.570135747	1	0.00375	0.14	0.85625	0	0	0	0	3	2.61E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215886945	10	69014750	C	G	CTNNA3	CCDS7269.1	r.?	-	-	intronic	38	0	0	66	11	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.015	0.985	0	0	0	0	3	4.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215887884	10	76323018	A	G	ADK	CCDS7344.1	r.?	-	-	intronic	25	0	0	53	10	18.86792453	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.932297447	0.932297447	1	0	0.0075	0.9925	0	0	0	0	3	1.57E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215888071	10	77939469	C	G	C10orf11	CCDS7351.1	r.?	-	-	intronic	38	0	0	76	18	23.68421053	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.170278638	1.170278638	1	0	0	1	0	0	0	0	3	3.63E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215888359	10	80253859	A	G	-	-	-	-	-	-	28	0	0	67	12	17.91044776	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.884986831	0.884986831	1	0	0.00375	0.99625	0	0	0	0	3	1.14E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215888625	10	82471174	T	G	-	-	-	-	-	-	37	0	0	99	15	15.15151515	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.748663102	0.748663102	1	0	0.0125	0.9875	0	0	0	0	3	4.43E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215888658	10	82746660	C	G	-	-	-	-	-	-	47	0	0	54	9	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01375	0.98625	0	0	0	0	3	8.48E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215888666	10	82795979	C	G	-	-	-	-	-	-	32	0	0	70	17	24.28571429	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.2	1.2	1	0	0	1	0	0	0	0	3	4.68E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215888765	10	83661273	A	G	NRG3	CCDS31233.1	r.?	-	-	intronic	36	0	0	82	21	25.6097561	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.265423242	1.265423242	1	0	0	1	0	0	0	0	3	6.53E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215888834	10	84183455	C	G	NRG3	CCDS31233.1	r.?	-	-	intronic	45	0	0	71	20	28.16901408	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.391880696	1.391880696	1	0	0	1	0	0	0	0	3	1.68E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215888888	10	84776706	A	G	-	-	-	-	-	-	30	0	0	62	12	19.35483871	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.956356736	0.956356736	1	0	0.00625	0.99375	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215889066	10	86020373	T	G	RGR	CCDS7374.1	r.?	-	-	downstream	43	0	0	80	18	22.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.111764706	1.111764706	1	0	0	1	0	0	0	0	3	1.01E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215889294	10	87816474	C	G	GRID1	CCDS31236.1	r.?	-	-	intronic	34	0	0	21	7	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	1.647058824	1	0	0	1	0	0	0	0	3	8.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215889298	10	87920372	A	G	GRID1	CCDS31236.1	r.?	-	-	intronic	24	0	0	60	9	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.02375	0.97625	0	0	0	0	3	2.29E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215889388	10	88675361	C	G	BMPR1A	CCDS7378.1	r.?	-	-	intronic	31	0	0	42	6	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.035	0.96375	0	0	0	0	3	7.02E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215889530	10	89636450	T	G	PTEN	ENST00000371953	r.?	-	-	intronic	36	0	0	81	16	19.75308642	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976034858	0.976034858	1	0	0.0025	0.9975	0	0	0	0	3	3.77E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215889546	10	89803648	T	G	-	-	-	-	-	-	22	0	0	36	7	19.44444444	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.960784314	0.960784314	1	0	0.00625	0.99375	0	0	0	0	3	5.74E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215889618	10	90530758	A	G	LIPN	CCDS44456.1	r.819+10a>g	c.819+10A>G	p.?	splice region	33	0	0	82	20	24.3902439	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0	1	0	0	0	0	3	4.40E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215889666	10	90973542	C	G	LIPA	CCDS7401.1	r.2917g>c	c.?	p.?	3'UTR variant	42	0	0	101	22	21.78217822	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.076295865	1.076295865	1	0	0	1	0	0	0	0	3	1.53E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215889710	10	91442967	T	G	-	-	-	-	-	-	29	0	0	84	21	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.15E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215889732	10	91642662	C	G	-	-	-	-	-	-	37	0	0	79	13	16.4556962	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.813104989	0.813104989	1	0	0.00875	0.99125	0	0	0	0	3	2.37E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215889792	10	92276915	T	G	-	-	-	-	-	-	41	0	0	95	10	10.52631579	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.520123839	0.520123839	1	0.015	0.29	0.695	0	0	0	0	3	6.70E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215890041	10	94163274	C	G	-	-	-	-	-	-	27	0	0	40	6	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.03125	0.96875	0	0	0	0	3	5.18E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215890358	10	96212049	A	G	TBC1D12	CCDS41553.1	r.?	-	-	intronic	36	0	0	64	12	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.005	0.995	0	0	0	0	3	6.30E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215890419	10	96678920	C	G	-	-	-	-	-	-	37	0	0	71	14	19.71830986	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.974316487	0.974316487	1	0	0	1	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215890788	10	99739367	T	G	CRTAC1	CCDS31266.1	r.?	-	-	intronic	36	0	0	69	5	7.246376812	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.358056266	0.358056266	1	0.0925	0.5	0.4075	0	0	0	0	2	2.69E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215890843	10	100223093	C	G	HPSE2	CCDS7477.1	r.?	-	-	intronic	36	0	0	66	14	21.21212121	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.048128342	1.048128342	1	0	0	1	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215890914	10	100695754	C	G	HPSE2	CCDS7477.1	r.?	-	-	intronic	34	0	0	26	6	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0.00875	0.99125	0	0	0	0	3	3.30E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215891639	10	106482924	C	G	SORCS3	CCDS7558.1	r.?	-	-	intronic	43	0	0	71	6	8.450704225	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.417564209	0.417564209	1	0.045	0.38	0.575	0	0	0	0	3	1.69E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215891793	10	107553991	T	G	-	-	-	-	-	-	34	0	0	57	16	28.07017544	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.386996904	1.386996904	1	0	0	1	0	0	0	0	3	7.28E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215892012	10	109142393	A	G	-	-	-	-	-	-	28	0	0	85	20	23.52941176	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0	1	0	0	0	0	3	9.82E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215892017	10	109193608	C	G	-	-	-	-	-	-	23	0	0	46	8	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.01375	0.98625	0	0	0	0	3	8.61E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215892270	10	111279341	A	G	-	-	-	-	-	-	44	0	0	61	11	18.03278689	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.891031823	0.891031823	1	0	0.00625	0.99375	0	0	0	0	3	1.62E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215892520	10	113463789	C	G	-	-	-	-	-	-	24	0	0	78	14	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.0025	0.9975	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215892683	10	114710860	T	G	TCF7L2	CCDS7576.1	r.?	-	-	intronic	20	0	0	13	4	30.76923077	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.520361991	1.520361991	1	0	0.005	0.995	0	0	0	0	3	4.31E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215892996	10	117253229	T	G	ATRNL1	CCDS7592.1	r.?	-	-	intronic	24	0	0	70	9	12.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.635294118	0.635294118	1	0	0.05375	0.94625	0	0	0	0	3	9.65E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215893117	10	118354441	A	G	PNLIPRP1	CCDS7595.1	r.?	-	-	intronic	40	0	0	22	5	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0.005	0.995	0	0	0	0	3	7.67E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215893229	10	119293484	C	G	-	-	-	-	-	-	40	0	0	69	16	23.1884058	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.145780051	1.145780051	1	0	0	1	0	0	0	0	3	2.27E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215893292	10	119888177	A	G	-	-	-	-	-	-	36	0	0	72	14	19.44444444	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.960784314	0.960784314	1	0	0.0025	0.9975	0	0	0	0	3	1.39E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215893363	10	120287540	C	G	-	-	-	-	-	-	41	0	0	54	13	24.07407407	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.189542484	1.189542484	1	0	0.00125	0.99875	0	0	0	0	3	1.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215893402	10	120644779	T	G	-	-	-	-	-	-	35	0	0	35	4	11.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.564705882	0.564705882	1	0.005	0.05375	0.94125	0	0	0	0	3	2.89E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215893503	10	121386090	C	G	-	-	-	-	-	-	30	0	0	27	6	22.22222222	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.0025	0.9975	0	0	0	0	3	4.23E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215893533	10	121550896	C	G	INPP5F	CCDS7616.1	r.?	-	-	intronic	40	0	0	68	10	14.70588235	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.726643599	0.726643599	1	0	0.0175	0.9825	0	0	0	0	3	2.18E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215893856	10	123814953	C	G	TACC2	CCDS7626.1	r.?	-	-	intronic	38	0	0	64	13	20.3125	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.003676471	1.003676471	1	0	0.00375	0.99625	0	0	0	0	3	1.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215894768	10	129467749	C	G	-	-	-	-	-	-	36	0	0	58	8	13.79310345	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.681541582	0.681541582	1	0	0.0575	0.9425	0	0	0	0	3	5.99E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215894812	10	129897765	C	G	MKI67	CCDS7659.1	r.?	-	-	intronic	55	0	0	65	9	13.84615385	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.684162896	0.684162896	1	0.00125	0.0475	0.95125	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215894922	10	130855978	C	G	-	-	-	-	-	-	46	0	0	24	4	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0.0025	0.01875	0.97875	0	0	0	0	3	6.13E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215895059	10	132236002	A	G	-	-	-	-	-	-	47	0	0	74	13	17.56756757	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.868044515	0.868044515	1	0	0.005	0.995	0	0	0	0	3	9.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215895218	10	133599904	C	G	ENSG00000189275	ENST00000341866	r.?	-	-	downstream	37	0	0	81	11	13.58024691	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.671023965	0.671023965	1	0	0.045	0.955	0	0	0	0	3	4.29E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215897082	11	13767156	A	G	-	-	-	-	-	-	38	0	0	49	12	24.48979592	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.965186074	0.965186074	1	0	0.005	0.995	0	0	0	0	3	1.90E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215897225	11	15137328	A	G	INSC	CCDS41621.1	r.?	-	-	intronic	34	0	0	60	12	20	0	0	NA	1	1	100							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.01125	0.98875	0	0	0	0	3	2.74E-16	1	0.005	1	NA	NA	NA
1353824	PD9772b	1215897607	11	19026348	A	G	-	-	-	-	-	-	39	0	0	58	14	24.13793103	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.951318458	0.951318458	1	0	0.00375	0.99625	0	0	0	0	3	5.04E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215897735	11	20453632	C	G	PRMT3	CCDS7853.1	r.?	-	-	intronic	32	0	0	63	16	25.3968254	148	0	0	164	30	18.29268293							3	2	1	1	NA	NA	NA	unphased	1.000933707	1.000933707	1	0	0.00125	0.99875	0	0	0	0	3	4.48E-23	1	3.02E-37	1	YES	somatic	1_1
1353824	PD9772b	1215897956	11	22260185	C	G	ANO5	CCDS31444.1	r.?	-	-	intronic	40	0	0	69	14	20.28985507	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.002557545	1.002557545	1	0	0	1	0	0	0	0	3	7.30E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215898203	11	23574502	C	G	-	-	-	-	-	-	35	0	0	60	15	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215898564	11	25711071	A	G	-	-	-	-	-	-	39	0	0	94	19	20.21276596	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.998748436	0.998748436	1	0	0	1	0	0	0	0	3	4.81E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215898616	11	25957427	T	G	-	-	-	-	-	-	43	0	0	81	17	20.98765432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.037037037	1.037037037	1	0	0.00125	0.99875	0	0	0	0	3	7.24E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215899328	11	30994369	C	G	ENSG00000226746	ENST00000399333	r.?	-	-	intronic	40	0	0	66	14	21.21212121	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.048128342	1.048128342	1	0	0.00125	0.99875	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215899655	11	33890601	C	G	LMO2	CCDS7888.2	r.?	-	-	intronic	35	0	0	7	3	42.85714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.68907563	1.68907563	1	0	0.00875	0.99125	0	0	0	0	3	4.31E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215899900	11	36215769	C	G	LDLRAD3	CCDS31462.1	r.?	-	-	intronic	29	0	0	117	20	17.09401709	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.015585721	1.015585721	1	0	0	1	0	0	0	0	3	1.02E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215899922	11	36361022	A	G	-	-	-	-	-	-	31	0	0	78	32	41.02564103	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.437405732	0.812468577	3	0	0	1	0	0	0	0	3	1.46E-52	1	1	1	NA	NA	NA
1353824	PD9772b	1215900005	11	36903789	C	G	-	-	-	-	-	-	31	0	0	47	7	14.89361702	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.88485607	0.88485607	1	0	0.005	0.995	0	0	0	0	3	4.12E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215900112	11	37423915	C	G	-	-	-	-	-	-	23	0	0	91	34	37.36263736	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.21978022	1.10989011	2	0	0	1	0	0	0	0	3	4.98E-54	1	1	1	NA	NA	NA
1353824	PD9772b	1215900618	11	40006848	T	G	-	-	-	-	-	-	31	0	0	90	15	16.66666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.990196078	0.990196078	1	0	0.00375	0.99625	0	0	0	0	3	9.83E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215901050	11	42578131	T	G	-	-	-	-	-	-	25	0	0	75	18	24	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.425882353	1.425882353	1	0	0	1	0	0	0	0	3	2.78E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215901195	11	43638315	T	G	-	-	-	-	-	-	24	0	0	46	10	21.73913043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.074168798	1.074168798	1	0	0.00625	0.99375	0	0	0	0	3	3.38E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215901338	11	44939145	C	G	TSPAN18	CCDS7910.1	r.?	-	-	intronic	21	0	0	27	6	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.00625	0.99375	0	0	0	0	3	4.23E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215901473	11	46076221	C	G	PHF21A	CCDS44578.1	r.?	-	-	intronic	29	0	0	86	11	12.79069767	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.632010944	0.632010944	1	0.0025	0.075	0.9225	0	0	0	0	3	8.47E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215901494	11	46248996	C	G	-	-	-	-	-	-	39	0	0	85	13	15.29411765	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.755709343	0.755709343	1	0	0.015	0.985	0	0	0	0	3	6.45E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215901528	11	46582165	A	G	AMBRA1	CCDS31475.1	r.?	-	-	intronic	28	0	0	83	21	25.30120482	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.250177179	1.250177179	1	0	0	1	0	0	0	0	3	8.70E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215902417	11	49296399	A	G	-	-	-	-	-	-	33	0	0	27	5	18.51851852	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.01375	0.98625	0	0	0	0	3	2.30E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215903714	11	56509228	C	G	OR9G4	CCDS31537.1	r.?	-	-	downstream	36	0	0	92	20	21.73913043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.074168798	1.074168798	1	0	0	1	0	0	0	0	3	5.65E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215903953	11	58248712	T	G	-	-	-	-	-	-	33	0	0	72	17	23.61111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.166666667	1.166666667	1	0	0	1	0	0	0	0	3	7.97E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215903999	11	58549969	A	G	-	-	-	-	-	-	36	0	0	75	9	12	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.592941176	0.592941176	1	0.01125	0.10875	0.88	0	0	0	0	3	1.82E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215904201	11	60133373	A	G	-	-	-	-	-	-	38	0	0	37	11	29.72972973	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.46899841	1.46899841	1	0	0	1	0	0	0	0	3	3.70E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215904249	11	60646928	A	G	ZP1	CCDS31572.1	r.?	-	-	downstream	32	0	0	99	21	21.21212121	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.048128342	1.048128342	1	0	0.00125	0.99875	0	0	0	0	3	5.30E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215904575	11	63324537	C	G	HRASLS2	CCDS8046.1	r.?	-	-	intronic	37	0	0	79	19	24.05063291	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.188384214	1.188384214	1	0	0	1	0	0	0	0	3	1.27E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215904664	11	64267199	T	G	-	-	-	-	-	-	28	0	0	24	4	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.02125	0.97875	0	0	0	0	3	6.13E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215904732	11	65166828	T	G	FRMD8	CCDS8102.1	r.?	-	-	intronic	25	0	0	4	2	50	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.470588235	2.470588235	1	0.0025	0.00875	0.98875	0	0	0	0	3	0.000149002	1	1	1	NA	NA	NA
1353824	PD9772b	1215905175	11	69157275	A	G	-	-	-	-	-	-	35	0	0	32	6	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.01	0.99	0	0	0	0	3	1.27E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215905266	11	70042452	T	G	-	-	-	-	-	-	31	0	0	21	5	23.80952381	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.176470588	1.176470588	1	0	0.0075	0.9925	0	0	0	0	3	5.95E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215905889	11	74828914	T	G	-	-	-	-	-	-	40	0	0	74	11	14.86486486	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.734499205	0.734499205	1	0	0.03125	0.96875	0	0	0	0	3	1.53E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215906150	11	77036926	A	G	PAK1	CCDS44687.1	r.?	-	-	intronic	35	0	0	81	25	30.86419753	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.525054466	0.762527233	2	0	0.01	0.99	0	0	0	0	3	1.20E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1215906170	11	77189094	T	G	PAK1	CCDS44687.1	r.?	-	-	upstream	31	0	0	71	15	21.12676056	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.043910522	1.043910522	1	0	0.00125	0.99875	0	0	0	0	3	2.15E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215906228	11	77648911	A	G	INTS4	CCDS31644.1	r.?	-	-	intronic	38	0	0	68	13	19.11764706	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.944636678	0.944636678	1	0	0.0025	0.9975	0	0	0	0	3	2.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215906388	11	78883810	A	G	ODZ4	CCDS44688.1	r.?	-	-	intronic	30	0	0	56	12	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.00375	0.99625	0	0	0	0	3	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215906492	11	79734077	A	G	-	-	-	-	-	-	37	0	0	85	14	16.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.81384083	0.81384083	1	0	0.00375	0.99625	0	0	0	0	3	1.66E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215906502	11	79857566	A	G	-	-	-	-	-	-	36	0	0	93	25	26.88172043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.328273245	1.328273245	1	0	0	1	0	0	0	0	3	6.46E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215906613	11	80726540	C	G	-	-	-	-	-	-	24	0	0	79	11	13.92405063	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.688011914	0.688011914	1	0	0.04875	0.95125	0	0	0	0	3	3.23E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215906657	11	81134467	A	G	-	-	-	-	-	-	48	0	0	91	18	19.78021978	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.977375566	0.977375566	1	0	0	1	0	0	0	0	3	1.27E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215906690	11	81355507	C	G	-	-	-	-	-	-	25	0	0	86	11	12.79069767	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.632010944	0.632010944	1	0.00125	0.07625	0.9225	0	0	0	0	3	8.47E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215906717	11	81534738	C	G	-	-	-	-	-	-	35	0	0	61	8	13.1147541	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.648023144	0.648023144	1	0.00125	0.0625	0.93625	0	0	0	0	3	9.09E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215906788	11	81974043	T	G	AP002802.1	ENST00000500502	r.?	-	-	intronic	37	0	0	75	11	14.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.724705882	0.724705882	1	0	0.02875	0.97125	0	0	0	0	3	1.78E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215907455	11	87010733	C	G	TMEM135	CCDS8280.1	r.?	-	-	intronic	42	0	0	68	13	19.11764706	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.944636678	0.944636678	1	0	0.0025	0.9975	0	0	0	0	3	2.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215907543	11	87863753	T	G	RAB38	CCDS8281.1	r.?	-	-	intronic	40	0	0	83	5	6.024096386	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.297661233	0.297661233	1	0.2325	0.6225	0.145	0	0	0	0	2	6.56E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215907599	11	88212978	A	G	-	-	-	-	-	-	29	0	0	86	18	20.93023256	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.034199726	1.034199726	1	0	0	1	0	0	0	0	3	4.22E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215908250	11	93006669	T	G	-	-	-	-	-	-	29	0	0	85	14	16.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.81384083	0.81384083	1	0	0.00375	0.99625	0	0	0	0	3	1.66E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215908264	11	93120628	A	G	CCDC67	CCDS44707.1	r.?	-	-	intronic	39	0	0	74	7	9.459459459	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.467408585	0.467408585	1	0.0275	0.32625	0.64625	0	0	0	0	3	1.05E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215908389	11	93884142	C	G	PANX1	CCDS8296.1	r.?	-	-	intronic	32	0	0	54	10	18.51851852	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.00875	0.99125	0	0	0	0	3	1.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215908548	11	95126864	C	G	-	-	-	-	-	-	27	0	0	94	14	14.89361702	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.7359199	0.7359199	1	0	0.0225	0.9775	0	0	0	0	3	7.32E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215908579	11	95415576	T	G	-	-	-	-	-	-	37	0	0	84	21	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.15E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215908729	11	96982024	A	G	-	-	-	-	-	-	45	0	0	56	12	21.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.844537815	0.844537815	1	0	0.00375	0.99625	0	0	0	0	3	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215908976	11	99514022	C	G	-	-	-	-	-	-	25	0	0	40	12	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0.00125	0.99875	0	0	0	0	3	1.20E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215909011	11	99843428	T	G	CNTN5	ENST00000279463	r.?	-	-	intronic	34	0	0	51	21	41.17647059	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.62283737	0.811418685	2	0	0.0025	0.9975	0	0	0	0	3	4.73E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215909271	11	102029411	T	G	YAP1	CCDS44716.1	r.?	-	-	intronic	39	0	0	72	19	26.38888889	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.04003268	1.04003268	1	0	0	1	0	0	0	0	3	1.75E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215909393	11	103005958	T	G	DYNC2H1	CCDS44717.1	r.?	-	-	intronic	32	0	0	52	14	26.92307692	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.061085973	1.061085973	1	0	0.00375	0.99625	0	0	0	0	3	9.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215909482	11	103935591	C	G	PDGFD	CCDS41703.1	r.?	-	-	intronic	38	0	0	67	17	25.37313433	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1	1	1	0	0.00625	0.99375	0	0	0	0	3	2.03E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215909752	11	106458370	A	G	-	-	-	-	-	-	38	0	0	66	17	25.75757576	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.015151515	1.015151515	1	0	0.00125	0.99875	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215909792	11	106975768	A	G	-	-	-	-	-	-	43	0	0	62	15	24.19354839	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.953510436	0.953510436	1	0	0.00375	0.99625	0	0	0	0	3	2.28E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215910051	11	109367030	C	G	-	-	-	-	-	-	29	0	0	62	14	22.58064516	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.889943074	0.889943074	1	0	0.00375	0.99625	0	0	0	0	3	1.42E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215910164	11	110540250	A	G	ARHGAP20	CCDS31673.1	r.?	-	-	intronic	29	0	0	75	23	30.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.208627451	1.208627451	1	0	0	1	0	0	0	0	3	1.10E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215910313	11	111731477	C	G	ALG9	CCDS41714.1	r.?	-	-	intronic	35	0	0	91	34	37.36263736	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.846153846	0.923076923	2	0	0	1	0	0	0	0	3	4.98E-54	1	1	1	NA	NA	NA
1353824	PD9772b	1215910462	11	112787811	A	G	-	-	-	-	-	-	33	0	0	60	22	36.66666667	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.811764706	0.905882353	2	0	0	1	0	0	0	0	3	2.81E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215910706	11	114600018	A	G	-	-	-	-	-	-	39	0	0	83	15	18.07228916	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.8929837	0.8929837	1	0	0.0025	0.9975	0	0	0	0	3	2.70E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215910723	11	114668677	A	G	-	-	-	-	-	-	24	0	0	87	14	16.09195402	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.795131846	0.795131846	1	0	0.00625	0.99375	0	0	0	0	3	2.35E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215910777	11	115110745	C	G	CADM1	CCDS8373.1	r.?	-	-	intronic	26	0	0	61	21	34.42622951	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.701060752	0.850530376	2	0	0	1	0	0	0	0	3	4.80E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215910827	11	115331774	A	G	CADM1	CCDS8373.1	r.?	-	-	intronic	28	0	0	84	15	17.85714286	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0	1	0	0	0	0	3	3.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215910934	11	116048990	A	G	-	-	-	-	-	-	25	0	0	55	19	34.54545455	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.706951872	0.853475936	2	0	0.00375	0.99625	0	0	0	0	3	4.51E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215910995	11	116416979	A	G	-	-	-	-	-	-	34	0	0	56	12	21.42857143	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.00125	0.99875	0	0	0	0	3	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215911383	11	120046857	A	G	ENSG00000176984	ENST00000319763	r.?	-	-	downstream	30	0	0	66	20	30.3030303	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.1942959	1.1942959	1	0	0	1	0	0	0	0	3	3.11E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215911606	11	122310681	C	G	-	-	-	-	-	-	42	0	0	55	9	16.36363636	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.644919786	0.644919786	1	0.00125	0.0475	0.95125	0	0	0	0	3	1.01E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215911860	11	124976577	C	G	TMEM218	CCDS31715.1	r.?	-	-	upstream	38	0	0	81	13	16.04938272	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.632534495	0.632534495	1	0.00125	0.085	0.91375	0	0	0	0	3	3.34E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215912669	11	133711375	T	G	SPATA19	CCDS8493.1	r.?	-	-	intronic	35	0	0	26	5	19.23076923	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.757918552	0.757918552	1	0.00125	0.025	0.97375	0	0	0	0	3	1.88E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215912906	12	622268	A	G	B4GALNT3	CCDS8504.1	r.?	-	-	intronic	18	0	0	64	6	9.375	0	0	NA	0	0	NA							4.298380389	3	1	0.701619611	3	2	0.298380389	unphased	0.491208456	0.491208456	1	0.025	0.195	0.78	0	0	0	0	3	9.14E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215912918	12	654344	C	G	B4GALNT3	CCDS8504.1	r.?	-	-	intronic	27	0	0	59	8	13.55932203	0	0	NA	0	0	NA							4.298380389	3	1	0.701619611	3	2	0.298380389	unphased	0.710448388	0.710448388	1	0	0.0375	0.9625	0	0	0	0	3	6.90E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215913171	12	1573986	A	G	ERC1	CCDS8508.1	r.?	-	-	intronic	39	0	0	60	10	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01125	0.98875	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215913194	12	1667848	A	G	-	-	-	-	-	-	27	0	0	38	9	23.68421053	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.170278638	1.170278638	1	0	0.00125	0.99875	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215913249	12	1930812	T	G	CACNA2D4	CCDS44785.1	r.?	-	-	intronic	33	0	0	6	4	66.66666667	194	1	0.515463918	10	0	0							4	2	2	1	NA	NA	NA	unphased	3.294117647	1.647058824	2	0.00125	0.005	0.99375	0	0	0	0	3	9.30E-09	1	1	0.621838193	NA	NA	NA
1353824	PD9772b	1215913479	12	3229224	C	G	TSPAN9	CCDS8520.1	r.?	-	-	intronic	33	0	0	15	4	26.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0.00125	0.005	0.99375	0	0	0	0	3	8.16E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215913673	12	4273777	C	G	-	-	-	-	-	-	17	0	0	18	5	27.77777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.37254902	1.37254902	1	0	0.005	0.995	0	0	0	0	3	2.54E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215913684	12	4348616	C	G	-	-	-	-	-	-	41	0	0	122	21	17.21311475	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	0.850530376	0.850530376	1	0	0.0025	0.9975	0	0	0	0	3	6.03E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215913859	12	5194543	C	G	-	-	-	-	-	-	27	0	0	61	15	24.59016393	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.215043394	1.215043394	1	0	0.00125	0.99875	0	0	0	0	3	1.73E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215914605	12	8552904	C	G	-	-	-	-	-	-	27	0	0	56	7	12.5	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.867647059	0.867647059	1	0	0.00875	0.99125	0	0	0	0	3	1.46E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215914873	12	9913166	C	G	CD69	CCDS8604.1	r.?	-	-	intronic	30	0	0	128	20	15.625	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.084558824	1.084558824	1	0	0	1	0	0	0	0	3	6.82E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215914932	12	10175801	A	G	CLEC12A	CCDS44830.1	r.?	-	-	downstream	33	0	0	122	24	19.67213115	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.365477338	1.365477338	1	0	0	1	0	0	0	0	3	6.28E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215915400	12	11287746	A	G	TAS2R43	ENST00000422992	r.?	-	-	upstream	37	0	0	113	26	23.00884956	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.597084852	0.798542426	2	0	0.005	0.995	0	0	0	0	3	2.57E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215915551	12	11873763	C	G	ETV6	CCDS8643.1	r.?	-	-	intronic	34	0	0	111	20	18.01801802	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.250662427	1.250662427	1	0	0	1	0	0	0	0	3	3.31E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215915756	12	12585284	T	G	LOH12CR1	CCDS8649.1	r.?	-	-	intronic	35	0	0	92	5	5.434782609	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.377237852	0.377237852	1	0.09875	0.37625	0.525	0	0	0	0	3	0.000107074	1	1	1	NA	NA	NA
1353824	PD9772b	1215916496	12	16031918	C	G	STRAP	CCDS8676.1	r.?	-	-	upstream	31	0	0	91	12	13.18681319	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.915319974	0.915319974	1	0	0.005	0.995	0	0	0	0	3	5.35E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215916632	12	16701440	T	G	LMO3	CCDS8678.1	r.3594a>c	c.?	p.?	3'UTR variant	29	0	0	119	13	10.92436975	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.758279783	0.758279783	1	0	0.0175	0.9825	0	0	0	0	3	5.82E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215916871	12	17941845	T	G	-	-	-	-	-	-	27	0	0	116	19	16.37931034	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.136916836	1.136916836	1	0	0	1	0	0	0	0	3	3.49E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215916999	12	18825168	A	G	-	-	-	-	-	-	27	0	0	133	56	42.10526316	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.922600619	0.974200206	3	0	0	1	0	0	0	0	3	1.37E-91	1	1	1	NA	NA	NA
1353824	PD9772b	1215917277	12	19926086	A	G	-	-	-	-	-	-	28	0	0	109	17	15.59633028	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.082568807	1.082568807	1	0	0	1	0	0	0	0	3	1.61E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215917452	12	20627824	A	G	PDE3A	CCDS31754.1	r.?	-	-	intronic	36	0	0	91	14	15.38461538	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.067873303	1.067873303	1	0	0	1	0	0	0	0	3	4.55E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215917807	12	21783985	A	G	LDHB	CCDS8691.1	r.?	-	-	downstream	31	0	0	116	20	17.24137931	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.196754564	1.196754564	1	0	0	1	0	0	0	0	3	8.48E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215918145	12	23427852	A	G	-	-	-	-	-	-	35	0	0	74	19	25.67567568	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.268680445	1.268680445	1	0	0	1	0	0	0	0	3	3.14E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215918157	12	23551277	A	G	-	-	-	-	-	-	31	0	0	81	10	12.34567901	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.610021786	0.610021786	1	0	0.08	0.92	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215918290	12	24617659	T	G	-	-	-	-	-	-	30	0	0	44	10	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0.0025	0.9975	0	0	0	0	3	2.08E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215918486	12	25876283	T	G	-	-	-	-	-	-	35	0	0	99	17	17.17171717	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.848484848	0.848484848	1	0	0.00375	0.99625	0	0	0	0	3	2.86E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215918489	12	25938391	T	G	-	-	-	-	-	-	42	0	0	69	12	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.01125	0.98875	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215918912	12	28537742	A	G	CCDC91	CCDS8716.1	r.?	-	-	intronic	31	0	0	64	10	15.625	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.772058824	0.772058824	1	0.00125	0.015	0.98375	0	0	0	0	3	1.16E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215918947	12	28765805	C	G	-	-	-	-	-	-	42	0	0	58	9	15.51724138	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.76673428	0.76673428	1	0	0.02375	0.97625	0	0	0	0	3	1.67E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215919085	12	29816182	T	G	TMTC1	CCDS8718.1	r.?	-	-	intronic	33	0	0	65	11	16.92307692	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.836199095	0.836199095	1	0	0.0025	0.9975	0	0	0	0	3	3.41E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215919089	12	29841497	T	G	TMTC1	CCDS8718.1	r.?	-	-	intronic	33	0	0	77	21	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	1.46E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215919205	12	30655822	C	G	-	-	-	-	-	-	40	0	0	87	16	18.3908046	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.90872211	0.90872211	1	0	0.0025	0.9975	0	0	0	0	3	1.29E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215919430	12	32221030	T	G	-	-	-	-	-	-	36	0	0	27	5	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.0075	0.9925	0	0	0	0	3	2.30E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215919506	12	32701566	A	G	FGD4	CCDS8727.1	r.?	-	-	intronic	37	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.0025	0.9975	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215919725	12	34298645	T	G	AC046130.1	ENST00000501954	r.?	-	-	intronic	52	0	0	108	15	13.88888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.68627451	0.68627451	1	0	0.04	0.96	0	0	0	0	3	1.73E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215920650	12	38057335	A	G	-	-	-	-	-	-	20	0	0	64	22	34.375	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.698529412	0.849264706	2	0	0.00375	0.99625	0	0	0	0	3	1.57E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215921271	12	39936576	T	G	-	-	-	-	-	-	39	0	0	80	23	28.75	0	0	NA	0	0	NA							3.063696442	2	1	0.936303558	2	2	0.063696442	unphased	1.151400962	1.151400962	1	0	0	1	0	0	0	0	3	6.19E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215921286	12	40083986	T	G	C12orf40	CCDS41770.1	r.?	-	-	intronic	23	0	0	64	11	17.1875	0	0	NA	0	0	NA							3.063696442	2	1	0.936303558	2	2	0.063696442	unphased	0.688337532	0.688337532	1	0.0025	0.03375	0.96375	0	0	0	0	3	2.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215921315	12	40266752	T	G	SLC2A13	CCDS8736.2	r.?	-	-	intronic	39	0	0	53	17	32.0754717	0	0	NA	0	0	NA							3.063696442	2	1	0.936303558	2	2	0.063696442	unphased	1.284581878	1.284581878	1	0	0	1	0	0	0	0	3	2.08E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215921402	12	40899562	A	G	MUC19	ENST00000398702	r.?	-	-	intronic	33	0	0	65	20	30.76923077	0	0	NA	0	0	NA							3.063696442	2	1	0.936303558	2	2	0.063696442	unphased	1.232268589	1.232268589	1	0	0	1	0	0	0	0	3	2.18E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215921403	12	40904649	A	G	MUC19	ENST00000440207	r.183a>g	c.183A>G	p.T62A	missense	44	0	0	55	15	27.27272727	0	0	NA	0	0	NA							3.063696442	2	1	0.936303558	2	2	0.063696442	unphased	1.092238067	1.092238067	1	0	0	1	0	0	0	0	3	3.01E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215921525	12	41877427	C	G	PDZRN4	CCDS8739.1	r.?	-	-	intronic	37	0	0	56	17	30.35714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.196428571	1.196428571	1	0	0	1	0	0	0	0	3	6.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215921690	12	43384587	A	G	-	-	-	-	-	-	38	0	0	78	14	17.94871795	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.707390649	0.707390649	1	0	0.0325	0.9675	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215921852	12	45239388	A	G	NELL2	CCDS8746.1	r.?	-	-	intronic	41	0	0	56	14	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	2.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215922012	12	46806671	A	G	-	-	-	-	-	-	35	0	0	66	14	21.21212121	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.83600713	0.83600713	1	0	0.01125	0.98875	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215922143	12	47898341	C	G	-	-	-	-	-	-	42	0	0	72	21	29.16666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.149509804	1.149509804	1	0	0	1	0	0	0	0	3	2.89E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215922213	12	48575085	C	G	C12orf68	CCDS31785.1	r.?	-	-	upstream	36	0	0	49	7	14.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.56302521	0.56302521	1	0.005	0.13625	0.85875	0	0	0	0	3	5.58E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215923139	12	56619411	C	G	OBFC2B	CCDS8911.1	r.720c>g	c.222C>G	p.Y74*	nonsense	28	0	0	38	12	31.57894737	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.244582043	1.244582043	1	0	0.0025	0.9975	0	0	0	0	3	5.86E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215923336	12	58442378	C	G	-	-	-	-	-	-	37	0	0	85	15	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.00125	0.99875	0	0	0	0	3	3.95E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215924229	12	65425855	C	G	-	-	-	-	-	-	23	0	0	74	18	24.32432432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.20190779	1.20190779	1	0	0	1	0	0	0	0	3	2.13E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215924236	12	65469662	A	G	WIF1	CCDS8971.1	r.?	-	-	intronic	37	0	0	65	20	30.76923077	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.520361991	0.760180995	2	0	0.015	0.985	0	0	0	0	3	2.18E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215924242	12	65486405	A	G	WIF1	CCDS8971.1	r.?	-	-	intronic	34	0	0	61	10	16.39344262	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.81002893	0.81002893	1	0	0.00875	0.99125	0	0	0	0	3	6.98E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215924244	12	65490122	A	G	WIF1	CCDS8971.1	r.?	-	-	intronic	36	0	0	99	17	17.17171717	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.848484848	0.848484848	1	0	0.0075	0.9925	0	0	0	0	3	2.86E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215924508	12	67149756	C	G	-	-	-	-	-	-	30	0	0	67	17	25.37313433	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.253731343	1.253731343	1	0	0	1	0	0	0	0	3	2.03E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215924695	12	68577435	A	G	-	-	-	-	-	-	31	0	0	67	13	19.40298507	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.958735733	0.958735733	1	0	0.00125	0.99875	0	0	0	0	3	2.41E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215925256	12	72599193	A	G	-	-	-	-	-	-	45	0	0	82	9	10.97560976	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.542324247	0.542324247	1	0.00375	0.17125	0.825	0	0	0	0	3	4.12E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215925423	12	73876937	C	G	-	-	-	-	-	-	30	0	0	66	19	28.78787879	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.422459893	1.422459893	1	0	0	1	0	0	0	0	3	2.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215925448	12	74018641	A	G	-	-	-	-	-	-	34	0	0	78	13	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01625	0.98375	0	0	0	0	3	1.99E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215925481	12	74181444	T	G	-	-	-	-	-	-	41	0	0	75	12	16	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0	0.0075	0.9925	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215926090	12	80435159	C	G	-	-	-	-	-	-	33	0	0	58	19	32.75862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.291075051	1.291075051	1	0	0	1	0	0	0	0	3	1.50E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215926733	12	87575365	T	G	-	-	-	-	-	-	28	0	0	56	15	26.78571429	0	0	NA	1	0	0							3	2	1	1	NA	NA	NA	unphased	1.055672269	1.055672269	1	0	0	1	0	0	0	0	3	4.09E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215927079	12	90774911	A	G	-	-	-	-	-	-	41	0	0	76	13	17.10526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.845201238	0.845201238	1	0	0.00625	0.99375	0	0	0	0	3	1.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215927240	12	92230374	T	G	-	-	-	-	-	-	38	0	0	106	17	16.03773585	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.79245283	0.79245283	1	0	0.01	0.99	0	0	0	0	3	9.78E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215927750	12	95672805	C	G	VEZT	CCDS44954.1	r.?	-	-	intronic	26	0	0	40	6	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0.00125	0.01125	0.9875	0	0	0	0	3	5.18E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215927758	12	95732710	C	G	-	-	-	-	-	-	40	0	0	81	15	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.0025	0.9975	0	0	0	0	3	1.82E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215928051	12	97507780	T	G	-	-	-	-	-	-	42	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0.005	0.995	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215928076	12	97728824	C	G	-	-	-	-	-	-	47	0	0	86	11	12.79069767	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.632010944	0.632010944	1	0.0025	0.07125	0.92625	0	0	0	0	3	8.47E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215928397	12	100428073	C	G	UHRF1BP1L	CCDS31882.1	r.?	-	-	downstream	42	0	0	93	18	19.35483871	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.956356736	0.956356736	1	0	0.0025	0.9975	0	0	0	0	3	1.95E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215928542	12	101498235	A	G	ANO4	CCDS31884.1	r.?	-	-	intronic	32	0	0	51	9	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.00875	0.99125	0	0	0	0	3	4.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215928841	12	103923757	A	G	-	-	-	-	-	-	30	0	0	56	10	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.005	0.995	0	0	0	0	3	2.82E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215929521	12	109051844	C	G	CORO1C	CCDS9120.1	r.?	-	-	intronic	30	0	0	62	12	19.35483871	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.956356736	0.956356736	1	0	0.005	0.995	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215930075	12	113346240	C	G	OAS1	CCDS41838.1	r.?	-	-	intronic	53	0	0	66	13	19.6969697	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.973262032	0.973262032	1	0	0.0025	0.9975	0	0	0	0	3	1.95E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215930476	12	117686257	T	G	NOS1	CCDS41842.1	r.?	-	-	intronic	30	0	0	52	13	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	6.47E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215930657	12	119311530	T	G	-	-	-	-	-	-	41	0	0	65	21	32.30769231	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.721780002	0.721780002	1	0	0.03	0.97	0	0	0	0	3	2.35E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215930719	12	119854270	T	G	CCDC60	CCDS9190.1	r.?	-	-	intronic	47	0	0	56	14	25	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.55852024	0.55852024	1	0.01125	0.40875	0.58	0	0	0	0	3	2.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215930750	12	120133965	C	G	CIT	CCDS9192.1	r.?	-	-	intronic	35	0	0	70	20	28.57142857	288	0	0	41	6	14.63414634							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.638308846	0.638308846	1	0.0025	0.13875	0.85875	0	0	0	0	3	1.22E-29	1	6.05E-08	1	YES	somatic	1_1
1353824	PD9772b	1215930835	12	120891744	A	G	GATC	CCDS31911.1	r.?	-	-	intronic	28	0	0	80	7	8.75	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.195482084	0.667391901	0.292904489	0.00125	0.045	0.95375	0	0	0	0	3	1.80E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215931320	12	125917471	C	G	TMEM132B	CCDS41859.1	r.?	-	-	intronic	32	0	0	63	20	31.74603175	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.709232051	0.709232051	1	0	0.03875	0.96125	0	0	0	0	3	1.05E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215932241	13	19074755	A	G	-	-	-	-	-	-	10	0	0	20	8	40	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.576470588	1.576470588	1	0	0	1	0	0	0	0	3	4.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215932839	13	20988300	C	G	CRYL1	CCDS41871.1	r.?	-	-	intronic	33	0	0	32	8	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.005	0.995	0	0	0	0	3	3.69E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215933465	13	26229249	C	G	ATP8A2	CCDS41873.1	r.?	-	-	intronic	31	0	0	53	16	30.18867925	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.189789123	1.189789123	1	0	0	1	0	0	0	0	3	1.90E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215934013	13	31495375	T	G	C13orf33	CCDS9338.1	r.?	-	-	intronic	38	0	0	74	19	25.67567568	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.011923688	1.011923688	1	0	0	1	0	0	0	0	3	3.14E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215934200	13	33400684	A	G	-	-	-	-	-	-	33	0	0	20	4	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.01875	0.98125	0	0	0	0	3	2.84E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215934292	13	34463755	T	G	RFC3	CCDS45025.1	r.?	-	-	intronic	39	0	0	71	16	22.53521127	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.888152444	0.888152444	1	0	0.0025	0.9975	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215934498	13	36495497	A	G	DCLK1	CCDS9354.1	r.?	-	-	intronic	39	0	0	47	13	27.65957447	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.090112641	1.090112641	1	0	0.0025	0.9975	0	0	0	0	3	1.47E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215935938	13	50599311	T	G	KCNRG	CCDS41889.1	r.?	-	-	downstream	38	0	0	69	14	20.28985507	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.799658994	0.799658994	1	0	0.01	0.99	0	0	0	0	3	7.30E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215936153	13	52974870	A	G	THSD1	CCDS9433.1	r.?	-	-	intronic	31	0	0	32	8	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00375	0.99625	0	0	0	0	3	3.69E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215936449	13	56100695	A	G	-	-	-	-	-	-	39	0	0	65	9	13.84615385	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.545701357	0.545701357	1	0.0125	0.19125	0.79625	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215936482	13	56376260	A	G	-	-	-	-	-	-	37	0	0	60	10	16.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.656862745	0.656862745	1	0	0.04625	0.95375	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215936979	13	61133123	A	G	TDRD3	CCDS9441.1	r.?	-	-	intronic	40	0	0	51	12	23.52941176	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.0075	0.9925	0	0	0	0	3	3.24E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215936989	13	61149887	C	G	TDRD3	CCDS9441.1	r.?	-	-	downstream	36	0	0	45	10	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.0125	0.9875	0	0	0	0	3	2.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215937598	13	65213847	T	G	-	-	-	-	-	-	39	0	0	54	10	18.51851852	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.729847495	0.729847495	1	0.00125	0.02125	0.9775	0	0	0	0	3	1.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215937849	13	67597798	T	G	PCDH9	CCDS9443.1	r.?	-	-	intronic	38	0	0	55	12	21.81818182	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.859893048	0.859893048	1	0	0.005	0.995	0	0	0	0	3	8.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215937883	13	67934368	C	G	-	-	-	-	-	-	56	0	0	67	18	26.86567164	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.00125	0.99875	0	0	0	0	3	2.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215938162	13	70679446	T	G	KLHL1	CCDS9445.1	r.?	-	-	intronic	40	0	0	79	19	24.05063291	110	0	0	137	25	18.24817518							3	2	1	1	NA	NA	NA	unphased	0.947877885	0.947877885	1	0	0	1	0	0	0	0	3	1.27E-26	1	2.84E-31	1	YES	somatic	1_1
1353824	PD9772b	1215938392	13	73152867	C	G	-	-	-	-	-	-	46	0	0	79	23	29.11392405	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.147431124	1.147431124	1	0	0	1	0	0	0	0	3	4.43E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215938544	13	74489274	C	G	KLF12	CCDS9449.1	r.?	-	-	intronic	23	0	0	51	9	17.64705882	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.69550173	0.69550173	1	0.00125	0.045	0.95375	0	0	0	0	3	4.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215938601	13	75078172	C	G	-	-	-	-	-	-	38	0	0	75	24	32	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.261176471	1.261176471	1	0	0	1	0	0	0	0	3	1.20E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215938889	13	77917431	T	G	-	-	-	-	-	-	28	0	0	71	16	22.53521127	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.888152444	0.888152444	1	0	0.00125	0.99875	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215939092	13	79968132	C	G	RBM26	CCDS9462.1	r.?	-	-	intronic	29	0	0	54	12	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.005	0.995	0	0	0	0	3	6.90E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215939148	13	80565999	T	G	-	-	-	-	-	-	28	0	0	58	17	29.31034483	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.155172414	1.155172414	1	0	0.00125	0.99875	0	0	0	0	3	1.24E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215939389	13	82996711	A	G	-	-	-	-	-	-	38	0	0	52	9	17.30769231	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.682126697	0.682126697	1	0	0.0375	0.9625	0	0	0	0	3	5.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215939394	13	83038341	A	G	-	-	-	-	-	-	34	0	0	65	15	23.07692308	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.909502262	0.909502262	1	0	0.00125	0.99875	0	0	0	0	3	5.00E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215939402	13	83099740	T	G	-	-	-	-	-	-	39	0	0	69	20	28.98550725	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.142369991	1.142369991	1	0	0	1	0	0	0	0	3	8.73E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215939497	13	83991352	C	G	-	-	-	-	-	-	39	0	0	48	9	18.75	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.738970588	0.738970588	1	0.00125	0.02875	0.97	0	0	0	0	3	2.75E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215939526	13	84200922	A	G	-	-	-	-	-	-	29	0	0	50	8	16	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.630588235	0.630588235	1	0.0025	0.03875	0.95875	0	0	0	0	3	1.74E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215940517	13	93684525	T	G	-	-	-	-	-	-	35	0	0	57	12	21.05263158	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.829721362	0.829721362	1	0	0.0075	0.9925	0	0	0	0	3	1.40E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215940611	13	94624678	T	G	GPC6	CCDS9469.1	r.?	-	-	intronic	47	0	0	62	10	16.12903226	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.635673624	0.635673624	1	0.0025	0.07125	0.92625	0	0	0	0	3	8.29E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215941178	13	100576023	C	G	-	-	-	-	-	-	25	0	0	31	9	29.03225806	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.144212524	1.144212524	1	0	0	1	0	0	0	0	3	3.57E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215941412	13	103284723	C	G	TPP2	CCDS9502.1	r.?	-	-	intronic	23	0	0	40	4	10	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.394117647	0.394117647	1	0.03875	0.2825	0.67875	0	0	0	0	3	4.95E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215941791	13	106916987	T	G	-	-	-	-	-	-	35	0	0	66	15	22.72727273	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.895721925	0.895721925	1	0	0.00375	0.99625	0	0	0	0	3	6.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215941861	13	107679026	A	G	-	-	-	-	-	-	43	0	0	70	20	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	1.22E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215942196	13	111468405	C	G	-	-	-	-	-	-	20	0	0	77	19	24.67532468	0	0	NA	0	0	NA							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.513766268	0.513766268	1	0.015	0.84875	0.13625	0	0	0	0	2	7.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215942430	13	113367924	C	G	ATP11A	CCDS32011.1	r.?	-	-	intronic	29	0	0	37	18	48.64864865	0	0	NA	0	0	NA							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	1.012916141	1.012916141	1	0	0	1	0	0	0	0	3	6.16E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215942504	13	114086176	A	G	ADPRHL1	CCDS9536.1	r.?	-	-	intronic	34	0	0	15	3	20	0	0	NA	0	0	NA							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.41642108	0.41642108	1	0.0325	0.23125	0.73625	0	0	0	0	3	5.44E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215942507	13	114101848	T	G	ADPRHL1	CCDS9536.1	r.?	-	-	intronic	28	0	0	21	3	14.28571429	334	1	0.299401198	21	0	0							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.297443629	0.297443629	1	0.17375	0.5425	0.28375	0	0	0	0	2	0.000155401	1	1	0.812539846	NA	NA	NA
1353824	PD9772b	1215942508	13	114101858	T	G	ADPRHL1	CCDS9536.1	r.?	-	-	intronic	29	0	0	20	3	15	324	2	0.617283951	21	0	0							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.31231581	0.31231581	1	0.1175	0.52125	0.36125	0	0	0	0	2	0.0001337	1	1	0.482003561	NA	NA	NA
1353824	PD9772b	1215942556	13	114532967	A	G	GAS6	CCDS45072.1	r.?	-	-	intronic	20	0	0	12	3	25	0	0	NA	0	0	NA							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.52052635	0.52052635	1	0.0075	0.09375	0.89875	0	0	0	0	3	2.66E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215944151	14	24340659	A	G	-	-	-	-	-	-	22	0	0	67	18	26.86567164	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	2.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215944248	14	25512422	C	G	STXBP6	CCDS9634.1	r.?	-	-	intronic	24	0	0	63	21	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	1.08E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215944740	14	29477128	A	G	-	-	-	-	-	-	44	0	0	63	14	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.005	0.995	0	0	0	0	3	1.81E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215944794	14	30083238	C	G	PRKD1	CCDS9637.1	r.?	-	-	intronic	35	0	0	69	13	18.84057971	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.742540494	0.742540494	1	0.00125	0.0175	0.98125	0	0	0	0	3	3.64E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215945294	14	35339557	A	G	BAZ1A	CCDS9651.1	r.?	-	-	intronic	33	0	0	68	19	27.94117647	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.101211073	1.101211073	1	0	0	1	0	0	0	0	3	5.06E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215945373	14	36299838	A	G	BRMS1L	CCDS32066.1	r.?	-	-	intronic	41	0	0	26	5	19.23076923	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.757918552	0.757918552	1	0.00125	0.015	0.98375	0	0	0	0	3	1.88E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215945584	14	38395014	T	G	-	-	-	-	-	-	40	0	0	76	13	17.10526316	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.674148607	0.674148607	1	0	0.05625	0.94375	0	0	0	0	3	1.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215946326	14	45936502	C	G	-	-	-	-	-	-	52	0	0	57	17	29.8245614	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.175438596	1.175438596	1	0	0	1	0	0	0	0	3	8.82E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215946590	14	48664390	T	G	-	-	-	-	-	-	40	0	0	48	7	14.58333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.574754902	0.574754902	1	0.00875	0.10875	0.8825	0	0	0	0	3	4.81E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215946773	14	50499588	T	G	-	-	-	-	-	-	27	0	0	83	21	25.30120482	0	0	NA	0	0	NA							3.829257977	2	1	0.170742023	3	1	0.829257977	unphased	1.20697739	1.20697739	1	0	0	1	0	0	0	0	3	8.70E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215947077	14	53472429	A	G	-	-	-	-	-	-	35	0	0	59	15	25.42372881	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.001994018	1.001994018	1	0	0	1	0	0	0	0	3	9.90E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215947282	14	55801435	T	G	FBXO34	CCDS32086.1	r.?	-	-	intronic	29	0	0	51	17	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	9.59E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215948910	14	71892010	T	G	-	-	-	-	-	-	26	0	0	69	6	8.695652174	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.342710997	0.342710997	1	0.17125	0.65625	0.1725	0	0	0	0	2	1.43E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215949547	14	77959063	A	G	ISM2	CCDS9864.1	r.?	-	-	intronic	31	0	0	29	8	27.5862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.087221095	1.087221095	1	0	0.00375	0.99625	0	0	0	0	3	1.53E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215949636	14	78696293	C	G	-	-	-	-	-	-	30	0	0	49	21	42.85714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.68907563	0.844537815	2	0	0.0025	0.9975	0	0	0	0	3	1.63E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215950098	14	83620532	T	G	-	-	-	-	-	-	39	1	2.564102564	50	16	32	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.261176471	1.261176471	1	0	0	1	0	0	0	0	3	6.40E-25	0.177567718	1	1	NA	NA	NA
1353824	PD9772b	1215950601	14	88291186	A	G	-	-	-	-	-	-	35	0	0	54	17	31.48148148	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.240740741	1.240740741	1	0	0	1	0	0	0	0	3	3.02E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215950887	14	90761056	A	G	C14orf102	CCDS9890.1	r.?	-	-	intronic	32	0	0	64	19	29.6875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.170036765	1.170036765	1	0	0.00125	0.99875	0	0	0	0	3	1.34E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215951220	14	94269231	C	G	-	-	-	-	-	-	37	0	0	14	3	21.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.844537815	0.844537815	1	0	0.0225	0.9775	0	0	0	0	3	4.37E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215951329	14	95722624	C	G	CLMN	CCDS9933.1	r.?	-	-	intronic	32	0	0	18	6	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.00375	0.99625	0	0	0	0	3	2.75E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215951505	14	97875033	C	G	-	-	-	-	-	-	25	0	0	56	9	16.07142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.633403361	0.633403361	1	0.00125	0.08125	0.9175	0	0	0	0	3	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215951622	14	99036510	A	G	-	-	-	-	-	-	32	0	0	68	18	26.47058824	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.043252595	1.043252595	1	0	0	1	0	0	0	0	3	3.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215951627	14	99104943	C	G	-	-	-	-	-	-	29	0	0	68	20	29.41176471	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.15916955	1.15916955	1	0	0	1	0	0	0	0	3	6.23E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215951824	14	101802081	A	G	-	-	-	-	-	-	31	0	0	42	11	26.19047619	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.032212885	1.032212885	1	0	0.00375	0.99625	0	0	0	0	3	1.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215952111	14	106076117	T	G	-	-	-	-	-	-	7	0	0	28	4	14.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.56302521	0.56302521	1	0.005	0.075	0.92	0	0	0	0	3	1.16E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215952715	15	20063843	A	G	ENSG00000215567	ENST00000413399	r.?	-	-	intronic	59	0	0	59	6	10.16949153	0	0	NA	0	0	NA							3.434143845	2	1	0.565856155	2	2	0.434143845	unphased	0.444947829	1.024885724	0.434143845	0.00125	0.01	0.98875	0	0	0	0	3	5.61E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215954840	15	23940987	C	G	-	-	-	-	-	-	39	0	0	92	19	20.65217391	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	0.997608418	0.997608418	1	0	0	1	0	0	0	0	3	3.08E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215955063	15	24892670	C	G	-	-	-	-	-	-	30	0	0	84	22	26.19047619	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	1.265137493	1.265137493	1	0	0	1	0	0	0	0	3	1.66E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215955304	15	26845408	A	G	GABRB3	CCDS10019.1	r.?	-	-	intronic	52	0	0	82	19	23.17073171	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	1.119267982	1.119267982	1	0	0	1	0	0	0	0	3	2.79E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215955430	15	27999431	C	G	OCA2	CCDS10020.1	r.?	-	-	downstream	30	0	0	37	6	16.21621622	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	0.783328374	0.880788995	0.889348503	0.00125	0.0125	0.98625	0	0	0	0	3	3.18E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215955783	15	31495733	T	G	-	-	-	-	-	-	37	0	0	20	4	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0.00125	0.0375	0.96125	0	0	0	0	3	2.84E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215955925	15	33162301	T	G	FMN1	CCDS45209.1	r.?	-	-	intronic	35	0	0	72	22	30.55555556	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.204248366	1.204248366	1	0	0	1	0	0	0	0	3	3.36E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215955945	15	33471564	A	G	FMN1	ENST00000320930	r.?	-	-	intronic	33	0	0	52	18	34.61538462	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.364253394	1.364253394	1	0	0	1	0	0	0	0	3	1.39E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215956194	15	36173959	T	G	-	-	-	-	-	-	34	0	0	68	26	38.23529412	299	0	0	324	60	18.51851852							3	2	1	1	NA	NA	NA	unphased	1.506920415	0.753460208	2	0	0.00875	0.99125	0	0	0	0	3	5.33E-42	1	3.57E-73	1	YES	somatic	1_1
1353824	PD9772b	1215956387	15	37905697	C	G	-	-	-	-	-	-	37	0	0	83	22	26.5060241	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.044649185	1.044649185	1	0	0	1	0	0	0	0	3	1.23E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215957160	15	46478363	A	G	-	-	-	-	-	-	34	0	0	78	17	21.79487179	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.858974359	0.858974359	1	0	0.00625	0.99375	0	0	0	0	3	3.59E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215957236	15	47085906	A	G	-	-	-	-	-	-	39	0	0	76	18	23.68421053	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.933436533	0.933436533	1	0	0	1	0	0	0	0	3	3.63E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215957240	15	47194162	A	G	-	-	-	-	-	-	37	0	0	52	15	28.84615385	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.136877828	1.136877828	1	0	0	1	0	0	0	0	3	1.15E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215957734	15	50957099	C	G	TRPM7	CCDS42035.1	r.?	-	-	intronic	28	0	0	42	8	19.04761905	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.75070028	0.75070028	1	0	0.025	0.975	0	0	0	0	3	3.96E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215957794	15	51678514	C	G	GLDN	CCDS10140.2	r.?	-	-	intronic	26	1	3.846153846	13	5	38.46153846	237	0	0	50	7	14							3	2	1	1	NA	NA	NA	unphased	1.515837104	1.515837104	1	0	0.00375	0.99625	0	0	0	0	3	3.89E-09	0.122190858	6.46E-09	1	YES	somatic	1_1
1353824	PD9772b	1215957813	15	51922434	A	G	-	-	-	-	-	-	34	0	0	87	14	16.09195402	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.634212306	0.634212306	1	0	0.1075	0.8925	0	0	0	0	3	2.35E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215957947	15	53117607	A	G	-	-	-	-	-	-	25	0	0	65	13	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.01125	0.98875	0	0	0	0	3	1.57E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215957988	15	53579557	C	G	-	-	-	-	-	-	23	0	0	53	8	15.09433962	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.594894562	0.594894562	1	0.00125	0.1075	0.89125	0	0	0	0	3	2.83E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215958146	15	55139411	C	G	-	-	-	-	-	-	31	0	0	46	9	19.56521739	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.771099744	0.771099744	1	0	0.0125	0.9875	0	0	0	0	3	1.82E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215958350	15	57012015	A	G	ZNF280D	CCDS42041.1	r.?	-	-	intronic	24	0	0	67	16	23.88059701	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0	1	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215958516	15	58272738	C	G	ALDH1A2	CCDS10163.1	r.?	-	-	intronic	29	0	0	20	5	25	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.005	0.995	0	0	0	0	3	4.55E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215958737	15	60251665	T	G	-	-	-	-	-	-	22	0	0	70	20	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0	1	0	0	0	0	3	1.22E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215958871	15	61272480	C	G	RORA	CCDS10177.1	r.?	-	-	intronic	48	0	0	86	18	20.93023256	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.034199726	1.034199726	1	0	0.00125	0.99875	0	0	0	0	3	4.22E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215958896	15	61440383	A	G	RORA	CCDS10177.1	r.?	-	-	intronic	31	0	0	54	9	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.0125	0.9875	0	0	0	0	3	8.48E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215958994	15	62112251	A	G	-	-	-	-	-	-	41	0	0	28	9	32.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.588235294	1.588235294	1	0	0	1	0	0	0	0	3	1.24E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215959066	15	62525336	T	G	-	-	-	-	-	-	36	0	0	95	20	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0	1	0	0	0	0	3	1.14E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215959191	15	63373449	A	G	-	-	-	-	-	-	35	0	0	57	12	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0.005	0.995	0	0	0	0	3	1.40E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215959239	15	63674790	C	G	CA12	CCDS10185.1	r.?	-	-	upstream	26	0	0	15	3	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.01875	0.98125	0	0	0	0	3	5.44E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215959521	15	65577824	C	G	PARP16	CCDS10204.1	r.?	-	-	intronic	32	0	0	39	6	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0.00125	0.02625	0.9725	0	0	0	0	3	4.43E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215960405	15	72342506	T	G	MYO9A	CCDS10239.1	r.?	-	-	intronic	34	0	0	54	7	12.96296296	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.640522876	0.640522876	1	0.0025	0.0775	0.92	0	0	0	0	3	1.13E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215960464	15	72778083	C	G	MIR630	CCDS10244.1	r.?	-	-	intronic	25	0	0	70	12	17.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.847058824	0.847058824	1	0	0.00375	0.99625	0	0	0	0	3	1.99E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215960479	15	72833965	A	G	MIR630	CCDS10244.1	r.?	-	-	intronic	36	0	0	86	17	19.76744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976744186	0.976744186	1	0	0	1	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215960977	15	78252852	A	G	-	-	-	-	-	-	35	0	0	37	9	24.32432432	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.958664547	0.958664547	1	0	0.00625	0.99375	0	0	0	0	3	2.14E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215961012	15	78687660	C	G	-	-	-	-	-	-	29	0	0	27	4	14.81481481	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.583877996	0.583877996	1	0.0025	0.05625	0.94125	0	0	0	0	3	1.00E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215961241	15	80830446	C	G	ARNT2	CCDS32307.1	r.?	-	-	intronic	36	0	0	57	20	35.0877193	0	0	NA	2	0	0							3	2	1	1	NA	NA	NA	unphased	1.382868937	1.382868937	1	0	0	1	0	0	0	0	3	9.67E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215961264	15	81083710	T	G	KIAA1199	CCDS10315.1	r.?	-	-	intronic	38	0	0	58	21	36.20689655	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.426977688	0.713488844	2	0	0.0275	0.9725	0	0	0	0	3	1.34E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215961369	15	82268090	A	G	-	-	-	-	-	-	40	0	0	66	19	28.78787879	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.134581105	1.134581105	1	0	0	1	0	0	0	0	3	2.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215961802	15	87216874	T	G	AGBL1	ENST00000421325	r.?	-	-	intronic	40	0	0	53	12	22.64150943	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.892341842	0.892341842	1	0	0.0025	0.9975	0	0	0	0	3	5.39E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215962018	15	89391368	C	G	ACAN	ENST00000439576	r.?	-	-	intronic	31	0	0	22	6	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0.00875	0.99125	0	0	0	0	3	1.09E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215962332	15	92388025	C	G	-	-	-	-	-	-	36	0	0	59	18	30.50847458	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.202392822	1.202392822	1	0	0.00125	0.99875	0	0	0	0	3	2.03E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215962659	15	95600345	T	G	-	-	-	-	-	-	37	0	0	82	23	28.04878049	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.105451937	1.105451937	1	0	0	1	0	0	0	0	3	1.19E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215962904	15	97879026	T	G	-	-	-	-	-	-	38	0	0	65	14	21.53846154	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.848868778	0.848868778	1	0	0.005	0.995	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215963351	15	101047785	C	G	LASS3	CCDS10384.1	r.?	-	-	intronic	31	0	0	79	25	31.64556962	0	0	NA	0	0	NA							3.206976683	2	1	0.793023317	2	2	0.206976683	unphased	1.312706694	1.312706694	1	0	0	1	0	0	0	0	3	5.74E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215963630	16	145632	A	G	C16orf35	ENST00000405960	r.?	-	-	intronic	22	0	0	35	14	40	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.835456834	0.835456834	1	0	0.005	0.995	0	0	0	0	3	1.28E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215963636	16	264442	T	G	LUC7L	CCDS10401.1	r.?	-	-	intronic	42	0	0	54	13	24.07407407	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.502821243	0.502821243	1	0.0225	0.76625	0.21125	0	0	0	0	2	1.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215963926	16	4346503	A	G	-	-	-	-	-	-	44	0	0	11	4	36.36363636	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.759506213	0.759506213	1	0	0.035	0.965	0	0	0	0	3	2.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215963948	16	4597657	C	G	-	-	-	-	-	-	33	0	0	73	16	21.91780822	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.457784567	0.457784567	1	0.0325	0.9175	0.05	0	0	0	0	2	6.15E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215964991	16	10942647	T	G	-	-	-	-	-	-	27	0	0	34	9	26.47058824	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.552875846	0.552875846	1	0.01375	0.24625	0.74	0	0	0	0	3	9.15E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215965326	16	13637573	A	G	-	-	-	-	-	-	37	0	0	57	21	36.84210526	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.820433437	0.910216718	2	0	0.00125	0.99875	0	0	0	0	3	8.56E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215966666	16	23209106	C	G	SCNN1G	CCDS10608.1	r.?	-	-	intronic	32	0	0	66	21	31.81818182	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.254010695	1.254010695	1	0	0	1	0	0	0	0	3	3.42E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215966726	16	23824016	T	G	-	-	-	-	-	-	33	0	0	58	16	27.5862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.087221095	1.087221095	1	0	0	1	0	0	0	0	3	1.00E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215967048	16	26855775	A	G	-	-	-	-	-	-	36	0	0	30	8	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.00375	0.99625	0	0	0	0	3	2.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215967062	16	26981890	C	G	-	-	-	-	-	-	30	0	0	73	18	24.65753425	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.971796938	0.971796938	1	0	0	1	0	0	0	0	3	1.62E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215967262	16	29295939	A	G	-	-	-	-	-	-	44	0	0	40	4	10	0	0	NA	0	0	NA							1.86601229	1	0	0.13398771	1	1	0.86601229	unphased	0.280718876	0.280718876	1	0.27375	0.6075	0.11875	0	0	0	0	2	4.95E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215967393	16	30578285	A	G	ZNF688	CCDS10684.1	r.?	-	-	downstream	30	0	0	33	6	18.18181818	0	0	NA	0	0	NA							1.86601229	1	0	0.13398771	1	1	0.86601229	unphased	0.510397956	0.58936572	0.86601229	0.0025	0.07875	0.91875	0	0	0	0	3	1.54E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215967498	16	31414806	C	G	ITGAD	CCDS32438.1	r.?	-	-	intronic	34	0	0	39	9	23.07692308	0	0	NA	0	0	NA							1.86601229	1	0	0.13398771	1	1	0.86601229	unphased	0.647812791	0.748041106	0.86601229	0	0.02125	0.97875	0	0	0	0	3	3.62E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215973844	16	34551533	C	G	ENSG00000237113	ENST00000425453	r.?	-	-	intronic	25	0	0	46	11	23.91304348	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.942455243	0.942455243	1	0	0.00625	0.99375	0	0	0	0	3	5.55E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215976065	16	52452971	T	G	-	-	-	-	-	-	39	0	0	70	17	24.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.957142857	0.957142857	1	0	0.00125	0.99875	0	0	0	0	3	4.68E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215977002	16	62536463	A	G	-	-	-	-	-	-	30	0	0	64	6	9.375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.369485294	0.369485294	1	0.10125	0.62125	0.2775	0	0	0	0	2	9.14E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215977662	16	69701179	A	G	MIR1538	CCDS10882.1	r.?	-	-	intronic	24	0	0	71	14	19.71830986	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.974316487	0.974316487	1	0	0.00375	0.99625	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215978163	16	73096699	A	G	-	-	-	-	-	-	33	0	0	38	7	18.42105263	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.910216718	0.910216718	1	0	0.00625	0.99375	0	0	0	0	3	8.61E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215978588	16	76069904	A	G	-	-	-	-	-	-	29	0	0	64	17	26.5625	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.3125	1.3125	1	0	0	1	0	0	0	0	3	8.43E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215978645	16	76561166	C	G	CNTNAP4	ENST00000307431	r.?	-	-	intronic	25	0	0	56	12	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.00375	0.99625	0	0	0	0	3	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215978775	16	77623870	C	G	-	-	-	-	-	-	26	0	0	65	15	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	5.00E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215978819	16	77992088	A	G	VAT1L	CCDS32492.1	r.?	-	-	intronic	37	0	0	96	21	21.875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.080882353	1.080882353	1	0	0	1	0	0	0	0	3	2.61E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215979037	16	79512997	A	G	-	-	-	-	-	-	37	0	0	67	14	20.89552239	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.032484636	1.032484636	1	0	0.00375	0.99625	0	0	0	0	3	4.66E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215979149	16	80300893	C	G	-	-	-	-	-	-	39	0	0	74	22	29.72972973	148	0	0	57	8	14.03508772							4	2	2	1	NA	NA	NA	unphased	1.46899841	0.734499205	2	0	0.01	0.99	0	0	0	0	3	6.78E-33	1	5.19E-10	1	YES	somatic	1_1
1353824	PD9772b	1215979437	16	82381894	C	G	-	-	-	-	-	-	29	0	0	70	12	17.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.847058824	0.847058824	1	0	0.0075	0.9925	0	0	0	0	3	1.99E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215979466	16	82593219	T	G	-	-	-	-	-	-	29	0	0	77	14	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.00375	0.99625	0	0	0	0	3	3.82E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215979501	16	82803151	A	G	-	-	-	-	-	-	42	0	0	89	23	25.84269663	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.276933245	1.276933245	1	0	0	1	0	0	0	0	3	1.02E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215979763	16	84870101	C	G	CRISPLD2	CCDS10949.1	r.?	-	-	intronic	20	0	0	6	4	66.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	3.294117647	1.647058824	2	0	0.0025	0.9975	0	0	0	0	3	9.30E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215980304	16	89322704	A	G	-	-	-	-	-	-	35	0	0	15	3	20	0	0	NA	0	0	NA							0.19281616	0	0	0.80718384	1	0	0.19281616	unphased	0.226798526	1.176242313	0.19281616	0.00125	0.0175	0.98125	0	0	0	0	3	5.44E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215980495	17	158309	T	G	RPH3AL	CCDS10994.1	r.?	-	-	intronic	29	0	0	40	13	32.5	0	0	NA	0	0	NA							0.384127823	0	0	0.615872177	1	0	0.384127823	unphased	0.430723895	1.12130356	0.384127823	0	0.00125	0.99875	0	0	0	0	3	1.30E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215981411	17	6731061	A	G	TEKT1	CCDS11083.1	r.?	-	-	intronic	31	0	0	44	5	11.36363636	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.399588843	0.694689027	0.575205347	0.0025	0.0475	0.95	0	0	0	0	3	2.88E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215981538	17	8115049	C	G	AURKB	CCDS11134.1	r.?	-	-	upstream	29	0	0	48	10	20.83333333	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.732579545	0.732579545	1	0	0.0375	0.9625	0	0	0	0	3	5.37E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215981746	17	9678099	C	G	DHRS7C	ENST00000330255	r.?	-	-	intronic	33	0	0	35	17	48.57142857	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.707956883	0.853978441	2	0	0.00125	0.99875	0	0	0	0	3	3.18E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215981884	17	11110450	A	G	-	-	-	-	-	-	34	0	0	71	8	11.26760563	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.396212036	0.688818416	0.575205347	0.00125	0.02625	0.9725	0	0	0	0	3	3.14E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215982158	17	12823858	A	G	ENSG00000006740	CCDS45616.1	r.?	-	-	intronic	46	0	0	46	18	39.13043478	0	0	NA	1	0	0							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.375975494	1.375975494	1	0	0	1	0	0	0	0	3	9.41E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215982160	17	12843438	T	G	ENSG00000006740	CCDS45616.1	r.?	-	-	intronic	34	0	0	71	31	43.66197183	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.535321639	1.077573975	1.424794653	0	0	1	0	0	0	0	3	4.86E-52	1	1	1	NA	NA	NA
1353824	PD9772b	1215982508	17	14948980	T	G	-	-	-	-	-	-	43	0	0	84	37	44.04761905	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.548882467	1.087091718	1.424794653	0	0	1	0	0	0	0	3	5.39E-62	1	1	1	NA	NA	NA
1353824	PD9772b	1215982512	17	14985726	C	G	-	-	-	-	-	-	32	0	0	77	15	19.48051948	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.685009445	1.190895476	0.575205347	0	0	1	0	0	0	0	3	8.05E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215983073	17	18511390	A	G	-	-	-	-	-	-	35	0	0	66	14	21.21212121	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.745899173	0.745899173	1	0	0.0075	0.9925	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215984311	17	22139767	C	G	-	-	-	-	-	-	37	0	0	15	5	33.33333333	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.172127272	1.172127272	1	0	0.00625	0.99375	0	0	0	0	3	9.00E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215986049	17	28391259	A	G	EFCAB5	ENST00000394835	r.?	-	-	intronic	36	0	0	81	38	46.91358025	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.649660606	1.157823411	1.424794653	0	0	1	0	0	0	0	3	5.41E-65	1	1	1	NA	NA	NA
1353824	PD9772b	1215986085	17	28648194	T	G	TMIGD1	CCDS32605.1	r.?	-	-	intronic	21	0	0	46	15	32.60869565	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.146646245	1.146646245	1	0	0	1	0	0	0	0	3	1.35E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215986155	17	29072242	T	G	AC127024.1	ENST00000499895	r.?	-	-	intronic	15	0	0	24	4	16.66666667	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.586063636	1.01887724	0.575205347	0	0.02	0.98	0	0	0	0	3	6.13E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215986498	17	32025982	T	G	ACCN1	CCDS42296.1	r.?	-	-	intronic	29	0	0	47	13	27.65957447	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.090112641	1.090112641	1	0	0	1	0	0	0	0	3	1.47E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215986742	17	34508258	A	G	TBC1D3B	CCDS42300.1	r.?	-	-	upstream	29	0	0	33	6	18.18181818	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.71657754	0.71657754	1	0.00125	0.0275	0.97125	0	0	0	0	3	1.54E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215987440	17	43447354	C	G	-	-	-	-	-	-	37	0	0	59	23	38.98305085	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.536390828	0.768195414	2	0	0.00875	0.99125	0	0	0	0	3	1.45E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1215987638	17	45235619	C	G	CDC27	CCDS45720.1	r.555g>c	c.428G>C	p.S143T	missense	33	0	0	57	9	15.78947368	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.622291022	0.622291022	1	0.00125	0.085	0.91375	0	0	0	0	3	1.42E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215987675	17	45443014	C	G	C17orf57	CCDS11512.1	r.?	-	-	intronic	46	0	0	71	16	22.53521127	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.888152444	0.888152444	1	0	0.00625	0.99375	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215988138	17	50272697	C	G	-	-	-	-	-	-	46	0	0	79	19	24.05063291	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.947877885	0.947877885	1	0	0	1	0	0	0	0	3	1.27E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215988251	17	51438102	C	G	-	-	-	-	-	-	47	0	0	61	17	27.86885246	0	0	NA	2	0	0							3	2	1	1	NA	NA	NA	unphased	1.098360656	1.098360656	1	0	0.0025	0.9975	0	0	0	0	3	3.33E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215988375	17	52562073	A	G	-	-	-	-	-	-	28	0	0	54	11	20.37037037	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.802832244	0.802832244	1	0	0.01625	0.98375	0	0	0	0	3	3.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215988445	17	53218799	A	G	STXBP4	CCDS11584.2	r.?	-	-	intronic	36	0	0	65	25	38.46153846	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.515837104	0.757918552	2	0	0.00875	0.99125	0	0	0	0	3	1.60E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1215988779	17	56761619	A	G	TEX14	CCDS32693.1	r.?	-	-	intronic	32	0	0	24	10	41.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.642156863	1.642156863	1	0	0	1	0	0	0	0	3	1.80E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215989706	17	65790064	C	G	-	-	-	-	-	-	29	0	0	19	8	42.10526316	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.080495356	1.040247678	2	0	0.00375	0.99625	0	0	0	0	3	2.81E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215989723	17	65866274	C	G	BPTF	CCDS11673.1	r.?	-	-	intronic	30	0	0	41	5	12.19512195	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.602582496	0.602582496	1	0.00375	0.07125	0.925	0	0	0	0	3	2.02E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215989744	17	65991901	C	G	C17orf58	CCDS42375.1	r.?	-	-	upstream	32	0	0	4	3	75	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	3.705882353	1.235294118	3	0	0.005	0.995	0	0	0	0	3	4.98E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215990502	17	70681429	C	G	SLC39A11	CCDS11690.1	r.?	-	-	intronic	36	0	0	84	9	10.71428571	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.207983193	0.207983193	1	0.88	0.12	0	0	0	0	0	1	5.13E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215991274	17	76706647	C	G	CYTH1	CCDS42392.2	r.?	-	-	intronic	28	0	0	70	13	18.57142857	0	0	NA	0	0	NA							0.675223744	0	0	0.324776256	1	0	0.675223744	unphased	0.300188611	0.300188611	1	0.49875	0.50125	0	0	0	0	0	2	4.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215991331	17	77484051	A	G	-	-	-	-	-	-	29	0	0	28	7	25	0	0	NA	0	0	NA							0.675223744	0	0	0.324776256	1	0	0.675223744	unphased	0.404100054	0.59846837	0.675223744	0.0025	0.095	0.9025	0	0	0	0	3	8.44E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215991399	17	78495035	T	G	-	-	-	-	-	-	42	0	0	15	4	26.66666667	0	0	NA	0	0	NA							0.675223744	0	0	0.324776256	1	0	0.675223744	unphased	0.431040057	0.431040057	1	0.04375	0.405	0.55125	0	0	0	0	3	8.16E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215991500	17	79883731	C	G	MAFG	CCDS11793.1	r.?	-	-	intronic	25	0	0	9	3	33.33333333	0	0	NA	0	0	NA							0.675223744	0	0	0.324776256	1	0	0.675223744	unphased	0.538800072	0.538800072	1	0.01	0.0975	0.8925	0	0	0	0	3	1.03E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215991797	18	410905	C	G	COLEC12	CCDS32782.1	r.?	-	-	intronic	44	0	0	61	13	21.31147541	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.266152363	1.266152363	1	0	0	1	0	0	0	0	3	6.41E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215991843	18	585848	C	G	CETN1	CCDS11820.1	r.?	-	-	downstream	39	0	0	87	31	35.63218391	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.116970926	1.058485463	2	0	0	1	0	0	0	0	3	1.28E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1215992035	18	1554241	C	G	-	-	-	-	-	-	42	0	0	102	12	11.76470588	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.698961938	0.698961938	1	0	0.03375	0.96625	0	0	0	0	3	2.18E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215992359	18	3079659	C	G	MYOM1	CCDS45824.1	r.?	-	-	intronic	23	0	0	94	7	7.446808511	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.442428035	0.442428035	1	0.03625	0.3875	0.57625	0	0	0	0	3	5.47E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215992526	18	4055259	C	G	-	-	-	-	-	-	35	0	0	84	15	17.85714286	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.06092437	1.06092437	1	0	0.00375	0.99625	0	0	0	0	3	3.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215993026	18	7551037	C	G	-	-	-	-	-	-	34	0	0	75	14	18.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0.005	0.995	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215993033	18	7625790	C	G	PTPRM	CCDS11840.1	r.?	-	-	intronic	51	0	0	24	4	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0.00125	0.01625	0.9825	0	0	0	0	3	6.13E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215993350	18	10280885	A	G	-	-	-	-	-	-	41	0	0	19	4	21.05263158	1	0	0	1	0	0							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0.00125	0.01125	0.9875	0	0	0	0	3	2.28E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215993521	18	11829914	C	G	GNAL	CCDS11851.1	r.?	-	-	intronic	29	0	0	64	16	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	5.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215993589	18	12215587	C	G	-	-	-	-	-	-	31	0	0	32	8	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.0025	0.9975	0	0	0	0	3	3.69E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215994239	18	14566370	C	G	-	-	-	-	-	-	38	0	0	72	22	30.55555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.509803922	0.754901961	2	0	0.00875	0.99125	0	0	0	0	3	3.36E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215995858	18	19447478	A	G	MIB1	CCDS11871.1	r.6136a>g	c.?	p.?	3'UTR variant	48	0	0	78	18	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0.00125	0.99875	0	0	0	0	3	6.10E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215995875	18	19481614	C	G	-	-	-	-	-	-	44	0	0	78	24	30.76923077	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.520361991	0.760180995	2	0	0.01125	0.98875	0	0	0	0	3	3.63E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215995979	18	20155646	T	G	-	-	-	-	-	-	49	0	0	67	17	25.37313433	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.253731343	1.253731343	1	0	0	1	0	0	0	0	3	2.03E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215996385	18	22938169	C	G	-	-	-	-	-	-	35	0	0	89	14	15.73033708	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.934567085	0.934567085	1	0	0.0025	0.9975	0	0	0	0	3	3.28E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215997020	18	26733556	A	G	-	-	-	-	-	-	29	0	0	80	11	13.75	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.816911765	0.816911765	1	0	0.01125	0.98875	0	0	0	0	3	3.73E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215997038	18	26933213	A	G	-	-	-	-	-	-	40	0	0	98	16	16.32653061	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.969987995	0.969987995	1	0	0.0025	0.9975	0	0	0	0	3	9.83E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215997325	18	28365020	A	G	-	-	-	-	-	-	49	0	0	98	20	20.40816327	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.212484994	1.212484994	1	0	0	1	0	0	0	0	3	2.25E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215997348	18	28549710	A	G	-	-	-	-	-	-	41	0	0	111	14	12.61261261	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.749337573	0.749337573	1	0.00125	0.03375	0.965	0	0	0	0	3	8.15E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215997657	18	30184030	C	G	-	-	-	-	-	-	41	0	0	100	15	15	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.891176471	0.891176471	1	0	0.00375	0.99625	0	0	0	0	3	5.19E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215997734	18	30613711	T	G	C18orf34	CCDS42424.1	r.?	-	-	intronic	43	0	0	102	40	39.21568627	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.329873126	1.164936563	2	0	0	1	0	0	0	0	3	2.51E-64	1	1	1	NA	NA	NA
1353824	PD9772b	1215997744	18	30750619	T	G	C18orf34	CCDS42424.1	r.?	-	-	intronic	41	0	0	93	14	15.05376344	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.894370651	0.894370651	1	0	0.00625	0.99375	0	0	0	0	3	6.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215997889	18	31994905	C	G	-	-	-	-	-	-	29	0	0	88	13	14.77272727	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.877673797	0.877673797	1	0	0.005	0.995	0	0	0	0	3	1.03E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215998172	18	33895633	C	G	FHOD3	CCDS32816.1	r.?	-	-	intronic	39	0	0	52	11	21.15384615	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.25678733	1.25678733	1	0	0.00125	0.99875	0	0	0	0	3	2.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215998267	18	34525345	A	G	KIAA1328	CCDS45855.1	r.?	-	-	intronic	34	0	0	80	11	13.75	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.816911765	0.816911765	1	0	0.01125	0.98875	0	0	0	0	3	3.73E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215998633	18	36854949	T	G	AC105201.1	ENST00000510201	r.?	-	-	intronic	30	0	0	109	22	20.18348624	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.199136535	1.199136535	1	0	0	1	0	0	0	0	3	9.58E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215998666	18	37020975	T	G	AC105201.1	ENST00000510201	r.?	-	-	intronic	24	0	0	110	17	15.45454545	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.918181818	0.918181818	1	0	0.0025	0.9975	0	0	0	0	3	1.90E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215998778	18	37707999	T	G	-	-	-	-	-	-	32	0	0	94	9	9.574468085	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.568836045	0.568836045	1	0.00375	0.14	0.85625	0	0	0	0	3	1.42E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215998825	18	37958745	A	G	-	-	-	-	-	-	37	0	0	115	14	12.17391304	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.723273657	0.723273657	1	0	0.02125	0.97875	0	0	0	0	3	1.36E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215998976	18	38832945	C	G	-	-	-	-	-	-	37	0	0	96	16	16.66666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.990196078	0.990196078	1	0	0.0025	0.9975	0	0	0	0	3	6.93E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215999128	18	39848460	C	G	-	-	-	-	-	-	49	0	0	85	11	12.94117647	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.768858131	0.768858131	1	0	0.01375	0.98625	0	0	0	0	3	7.42E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215999178	18	40062508	A	G	-	-	-	-	-	-	39	0	0	99	11	11.11111111	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.660130719	0.660130719	1	0.00125	0.05125	0.9475	0	0	0	0	3	4.11E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215999450	18	41652975	A	G	-	-	-	-	-	-	35	0	0	119	18	15.12605042	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.898665348	0.898665348	1	0	0.005	0.995	0	0	0	0	3	2.18E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215999468	18	41745728	A	G	-	-	-	-	-	-	28	0	0	80	14	17.5	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.039705882	1.039705882	1	0	0	1	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215999510	18	42083425	A	G	AC110014.1	ENST00000511428	r.?	-	-	intronic	32	0	0	117	18	15.38461538	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.914027149	0.914027149	1	0	0.0025	0.9975	0	0	0	0	3	1.58E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215999568	18	42434455	C	G	SETBP1	CCDS11923.2	r.?	-	-	intronic	22	0	0	86	14	16.27906977	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.967168263	0.967168263	1	0	0	1	0	0	0	0	3	1.98E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215999730	18	43468671	C	G	KIAA1632	CCDS11926.2	r.?	-	-	intronic	30	0	0	70	14	20	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.188235294	1.188235294	1	0	0	1	0	0	0	0	3	9.08E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215999760	18	43690448	T	G	HAUS1	CCDS11928.1	r.?	-	-	intronic	20	0	0	62	8	12.90322581	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.766603416	0.766603416	1	0	0.01875	0.98125	0	0	0	0	3	1.04E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215999832	18	44181828	C	G	LOXHD1	ENST00000398722	r.?	-	-	upstream	37	0	0	102	15	14.70588235	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.873702422	0.873702422	1	0	0.0025	0.9975	0	0	0	0	3	7.08E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216000091	18	45588886	A	G	-	-	-	-	-	-	34	0	0	91	17	18.68131868	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.10989011	1.10989011	1	0	0	1	0	0	0	0	3	6.18E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216000139	18	45925753	C	G	-	-	-	-	-	-	27	0	0	47	8	17.0212766	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.01126408	1.01126408	1	0	0.005	0.995	0	0	0	0	3	1.03E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216000150	18	45959595	A	G	-	-	-	-	-	-	35	0	0	87	12	13.79310345	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.819472617	0.819472617	1	0	0.01375	0.98625	0	0	0	0	3	3.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216000686	18	49293869	C	G	-	-	-	-	-	-	29	0	0	58	11	18.96551724	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.126774848	1.126774848	1	0	0.0025	0.9975	0	0	0	0	3	8.96E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216000803	18	49944147	A	G	DCC	CCDS11952.1	r.?	-	-	intronic	34	0	0	97	16	16.49484536	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.979987871	0.979987871	1	0	0.00125	0.99875	0	0	0	0	3	8.26E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216000807	18	49963305	A	G	DCC	CCDS11952.1	r.?	-	-	intronic	38	0	0	96	14	14.58333333	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.866421569	0.866421569	1	0	0.0075	0.9925	0	0	0	0	3	9.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216001047	18	51292087	C	G	-	-	-	-	-	-	38	0	0	44	13	29.54545455	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.755347594	0.877673797	2	0	0.005	0.995	0	0	0	0	3	5.49E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216001318	18	53041703	C	G	TCF4	CCDS42438.1	r.?	-	-	intronic	44	0	0	103	16	15.53398058	0	0	NA	3	0	0							5	3	2	1	NA	NA	NA	unphased	0.922901199	0.922901199	1	0	0.00625	0.99375	0	0	0	0	3	2.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216001412	18	53629321	C	G	-	-	-	-	-	-	24	0	0	104	9	8.653846154	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.514140271	0.514140271	1	0.0125	0.2675	0.72	0	0	0	0	3	3.50E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216001535	18	54583056	C	G	WDR7	CCDS11962.1	r.?	-	-	intronic	35	0	0	78	20	25.64102564	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.266968326	1.266968326	1	0	0	1	0	0	0	0	3	1.43E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216001934	18	57440674	C	G	-	-	-	-	-	-	29	0	0	88	22	25	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	5.27E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216002632	18	62147078	A	G	-	-	-	-	-	-	36	0	0	104	21	20.19230769	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.199660633	1.199660633	1	0	0	1	0	0	0	0	3	1.64E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216002782	18	62924965	A	G	-	-	-	-	-	-	42	0	0	82	18	21.95121951	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.304160689	1.304160689	1	0	0	1	0	0	0	0	3	1.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216003150	18	64885010	C	G	-	-	-	-	-	-	20	0	0	94	21	22.34042553	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.327284105	1.327284105	1	0	0	1	0	0	0	0	3	1.60E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216003231	18	65268830	C	G	AC114689.1	ENST00000500778	r.?	-	-	intronic	34	0	0	113	18	15.92920354	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.946382093	0.946382093	1	0	0.00125	0.99875	0	0	0	0	3	8.20E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216003631	18	67305410	A	G	DOK6	CCDS32841.1	r.?	-	-	intronic	37	0	0	80	19	23.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.173529412	1.173529412	1	0	0	1	0	0	0	0	3	1.65E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216003764	18	68225253	C	G	AC013558.1	ENST00000511515	r.?	-	-	intronic	46	0	0	91	16	17.58241758	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.868778281	0.868778281	1	0	0.00375	0.99625	0	0	0	0	3	2.79E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216004045	18	70058412	A	G	-	-	-	-	-	-	36	0	0	44	7	15.90909091	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.786096257	0.786096257	1	0	0.01125	0.98875	0	0	0	0	3	2.55E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216004052	18	70127154	C	G	-	-	-	-	-	-	36	0	0	42	10	23.80952381	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.176470588	1.176470588	1	0	0	1	0	0	0	0	3	1.24E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216004651	18	74906634	A	G	-	-	-	-	-	-	29	0	0	71	14	19.71830986	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.974316487	0.974316487	1	0	0.00125	0.99875	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216004744	18	75481589	A	G	-	-	-	-	-	-	26	0	0	14	3	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.01875	0.98125	0	0	0	0	3	4.37E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216004838	18	76234452	T	G	-	-	-	-	-	-	31	0	0	16	3	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.02125	0.97875	0	0	0	0	3	6.67E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216005388	19	2669846	A	G	GNG7	CCDS12091.1	r.?	-	-	intronic	30	0	0	26	5	19.23076923	0	0	NA	0	0	NA							0	0	0	1	NA	NA	NA	unphased	0.180995475	0.180995475	1	0.86125	0.13875	0	0	0	0	0	1	1.88E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216005471	19	3671742	C	G	PIP5K1C	CCDS32872.1	r.?	-	-	intronic	37	0	0	7	3	42.85714286	0	0	NA	0	0	NA							0.250998351	0	0	0.749001649	1	0	0.250998351	unphased	0.510932066	0.510932066	1	0.0225	0.2025	0.775	0	0	0	0	3	4.31E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216005903	19	7959683	C	G	LRRC8E	CCDS12189.1	r.?	-	-	intronic	29	0	0	15	4	26.66666667	181	0	0	33	3	9.090909091							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.765356501	0.765356501	1	0.00125	0.025	0.97375	0	0	0	0	3	8.16E-07	1	0.000609557	1	YES	somatic	1_1
1353824	PD9772b	1216005982	19	8681748	A	G	-	-	-	-	-	-	22	0	0	60	10	16.66666667	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.478347813	0.478347813	1	0.02	0.58875	0.39125	0	0	0	0	2	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216006093	19	9183286	C	G	-	-	-	-	-	-	39	0	0	30	5	16.66666667	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.478347813	0.514955811	0.928910409	0.0175	0.13	0.8525	0	0	0	0	3	4.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216006148	19	9573320	C	G	ZNF560	CCDS12214.1	r.?	-	-	downstream	30	0	0	88	18	20.45454545	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.587063225	0.587063225	1	0.00125	0.33	0.66875	0	0	0	0	3	6.62E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216006272	19	10708513	C	G	-	-	-	-	-	-	33	0	0	47	10	21.27659574	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.610656783	0.657390398	0.928910409	0	0.0675	0.9325	0	0	0	0	3	4.27E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216006338	19	11459047	C	G	CCDC159	CCDS45976.1	r.?	-	-	intronic	27	0	0	22	8	36.36363636	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	1.043667956	1.043667956	1	0	0.0075	0.9925	0	0	0	0	3	1.17E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216006340	19	11501955	T	G	RGL3	CCDS32910.1	r.?	-	-	downstream	43	0	0	61	16	26.2295082	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.752809673	0.810422261	0.928910409	0	0.0025	0.9975	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216006539	19	12874757	T	G	HOOK2	CCDS42508.1	r.?	-	-	intronic	38	0	0	18	4	22.22222222	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.637797084	0.686607749	0.928910409	0.0025	0.03625	0.96125	0	0	0	0	3	1.81E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216006581	19	13362884	T	G	CACNA1A	CCDS45998.1	r.?	-	-	intronic	28	0	0	48	11	22.91666667	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.657728243	0.708064241	0.928910409	0	0.045	0.955	0	0	0	0	3	9.31E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216006703	19	14625845	C	G	DNAJB1	CCDS12312.1	r.1970g>c	c.?	p.?	3'UTR variant	40	0	0	47	6	12.76595745	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.36639407	0.36639407	1	0.13875	0.6625	0.19875	0	0	0	0	2	1.41E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216006841	19	15404822	C	G	-	-	-	-	-	-	25	0	0	71	9	12.67605634	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.36381383	0.36381383	1	0.14	0.8175	0.0425	0	0	0	0	2	1.10E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216006847	19	15448556	C	G	-	-	-	-	-	-	30	0	0	57	15	26.31578947	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.755286021	0.813088123	0.928910409	0	0.00875	0.99125	0	0	0	0	3	5.53E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216007267	19	19083944	A	G	-	-	-	-	-	-	36	0	0	18	3	16.66666667	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.478347813	0.514955811	0.928910409	0.0125	0.0875	0.9	0	0	0	0	3	9.64E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216007475	19	20870422	T	G	-	-	-	-	-	-	40	0	0	65	10	15.38461538	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.441551828	0.441551828	1	0.0525	0.7325	0.215	0	0	0	0	2	1.36E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216008127	19	24333763	C	G	-	-	-	-	-	-	29	0	0	71	16	22.53521127	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.662800331	0.662800331	1	0	0.07125	0.92875	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216008974	19	28444835	C	G	-	-	-	-	-	-	34	0	0	91	20	21.97802198	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.646412411	0.646412411	1	0	0.135	0.865	0	0	0	0	3	4.44E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216009217	19	30412492	A	G	-	-	-	-	-	-	40	0	0	65	13	20	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.588235294	0.588235294	1	0.00375	0.18875	0.8075	0	0	0	0	3	1.57E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216009331	19	31311645	A	G	-	-	-	-	-	-	36	0	0	77	15	19.48051948	223	0	0	53	11	20.75471698							2	1	1	1	NA	NA	NA	unphased	0.572956455	0.572956455	1	0.005	0.3125	0.6825	0	0	0	0	3	8.05E-20	1	3.07E-15	1	YES	somatic	1_1
1353824	PD9772b	1216009513	19	32637854	T	G	-	-	-	-	-	-	41	0	0	84	17	20.23809524	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.595238095	0.595238095	1	0.00125	0.25375	0.745	0	0	0	0	3	1.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216009708	19	34261474	A	G	CHST8	CCDS12433.1	r.?	-	-	intronic	31	0	0	18	6	33.33333333	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.980392157	0.980392157	1	0	0.005	0.995	0	0	0	0	3	2.75E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216009710	19	34284999	C	G	KCTD15	CCDS12434.1	r.?	-	-	upstream	38	0	0	79	14	17.72151899	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.521221147	0.521221147	1	0.0125	0.6075	0.38	0	0	0	0	2	5.60E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216009825	19	35212410	T	G	-	-	-	-	-	-	37	0	0	88	19	21.59090909	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.635026738	0.635026738	1	0.00125	0.11625	0.8825	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216009946	19	36200294	T	G	ZBTB32	CCDS12471.1	r.?	-	-	upstream	28	0	0	56	8	14.28571429	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.420168067	0.420168067	1	0.0675	0.665	0.2675	0	0	0	0	2	4.48E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216010047	19	36989556	A	G	AC092296.3	ENST00000500282	r.?	-	-	intronic	30	0	0	24	4	16.66666667	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.490196078	0.490196078	1	0.0175	0.1475	0.835	0	0	0	0	3	6.13E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216010071	19	37110617	C	G	ZNF382	CCDS33004.1	r.?	-	-	intronic	38	0	0	42	5	11.9047619	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.350140056	0.350140056	1	0.13625	0.56625	0.2975	0	0	0	0	2	2.28E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216010228	19	37945142	C	G	ZNF569	CCDS12503.1	r.?	-	-	intronic	42	0	0	65	18	27.69230769	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.814479638	0.814479638	1	0	0.005	0.995	0	0	0	0	3	1.52E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216010535	19	40189278	C	G	-	-	-	-	-	-	30	0	0	83	18	21.68674699	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.6378455	0.6378455	1	0	0.13125	0.86875	0	0	0	0	3	2.09E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216011109	19	44676913	A	G	ZNF226	CCDS46102.1	r.?	-	-	intronic	32	0	0	91	15	16.48351648	210	0	0	203	34	16.74876847							2	1	1	1	NA	NA	NA	unphased	0.484809308	0.484809308	1	0.02625	0.8125	0.16125	0	0	0	0	2	1.17E-18	1	1.32E-40	1	YES	somatic	1_1
1353824	PD9772b	1216011266	19	45057021	C	G	-	-	-	-	-	-	37	0	0	63	19	30.15873016	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.887021475	0.887021475	1	0	0.00125	0.99875	0	0	0	0	3	9.48E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216011448	19	46951433	C	G	-	-	-	-	-	-	29	0	0	21	8	38.0952381	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	1.120448179	1.120448179	1	0	0.0025	0.9975	0	0	0	0	3	7.50E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216011803	19	49900294	A	G	CCDC155	CCDS46140.1	r.?	-	-	intronic	28	0	0	33	7	21.21212121	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.623885918	0.623885918	1	0.005	0.07125	0.92375	0	0	0	0	3	2.98E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216011873	19	50833554	C	G	ENSG00000251295	CCDS12793.1	r.?	-	-	upstream	33	0	0	11	4	36.36363636	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	1.069518717	1.069518717	1	0	0.0125	0.9875	0	0	0	0	3	2.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216012104	19	52188577	A	G	MIRLET7E	ENST00000503177	r.?	-	-	downstream	34	0	0	74	9	12.16216216	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.426540002	0.753697175	0.565930212	0	0.0275	0.9725	0	0	0	0	3	1.61E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216012117	19	52278435	T	G	FPR2	CCDS12840.1	r.?	-	-	downstream	32	0	0	96	11	11.45833333	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.401855974	0.710080441	0.565930212	0.00125	0.02625	0.9725	0	0	0	0	3	2.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216012228	19	53098783	A	G	-	-	-	-	-	-	21	0	0	62	9	14.51612903	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.509096131	0.899574048	0.565930212	0	0.01	0.99	0	0	0	0	3	3.12E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216012531	19	54355946	T	G	-	-	-	-	-	-	26	0	0	26	4	15.38461538	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.539554874	0.953394717	0.565930212	0.00125	0.01	0.98875	0	0	0	0	3	8.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216013509	19	58574551	T	G	ZNF135	CCDS12970.1	r.?	-	-	intronic	33	0	0	49	10	20.40816327	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.715736058	1.264707278	0.565930212	0	0	1	0	0	0	0	3	6.72E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216013689	2	791051	C	G	-	-	-	-	-	-	26	0	0	22	7	31.81818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.572192513	1.572192513	1	0	0.00125	0.99875	0	0	0	0	3	1.25E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216014193	2	4414971	T	G	-	-	-	-	-	-	33	0	0	86	22	25.58139535	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.264021888	1.264021888	1	0	0.00125	0.99875	0	0	0	0	3	2.98E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216014338	2	5679716	A	G	-	-	-	-	-	-	28	0	0	53	15	28.30188679	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.398446171	1.398446171	1	0	0	1	0	0	0	0	3	1.60E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216014536	2	7038692	C	G	RSAD2	CCDS1656.1	r.?	-	-	downstream	31	0	0	79	22	27.84810127	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.376023827	1.376023827	1	0	0	1	0	0	0	0	3	3.56E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216014819	2	9201494	T	G	-	-	-	-	-	-	34	0	0	58	11	18.96551724	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.937119675	0.937119675	1	0	0.00875	0.99125	0	0	0	0	3	8.96E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216014824	2	9207216	A	G	-	-	-	-	-	-	26	0	0	69	9	13.04347826	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.644501279	0.644501279	1	0.00125	0.0575	0.94125	0	0	0	0	3	8.45E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216014899	2	9888326	A	G	-	-	-	-	-	-	37	0	0	85	14	16.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.81384083	0.81384083	1	0	0.0075	0.9925	0	0	0	0	3	1.66E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216015022	2	11009003	C	G	-	-	-	-	-	-	34	0	0	10	4	40	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.976470588	1.976470588	1	0	0.00375	0.99625	0	0	0	0	3	1.28E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216015292	2	12993834	T	G	-	-	-	-	-	-	47	0	0	63	11	17.46031746	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.862745098	0.862745098	1	0	0.00625	0.99375	0	0	0	0	3	2.37E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216015356	2	13510883	A	G	-	-	-	-	-	-	45	0	0	99	17	17.17171717	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.848484848	0.848484848	1	0	0.005	0.995	0	0	0	0	3	2.86E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216015547	2	14788667	A	G	-	-	-	-	-	-	36	0	0	86	17	19.76744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976744186	0.976744186	1	0	0.00125	0.99875	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216015605	2	15237396	A	G	-	-	-	-	-	-	37	0	0	71	11	15.49295775	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.765534383	0.765534383	1	0.00125	0.01875	0.98	0	0	0	0	3	9.49E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216015673	2	15719596	A	G	-	-	-	-	-	-	35	0	0	79	17	21.51898734	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.063291139	1.063291139	1	0	0	1	0	0	0	0	3	4.55E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216015676	2	15736477	A	G	DDX1	CCDS1686.1	r.?	-	-	intronic	38	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.0025	0.9975	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216015709	2	16003953	A	G	-	-	-	-	-	-	31	0	0	82	18	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0.00125	0.99875	0	0	0	0	3	1.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216015848	2	17393923	A	G	-	-	-	-	-	-	34	0	0	94	11	11.70212766	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.578222778	0.578222778	1	0.0075	0.1675	0.825	0	0	0	0	3	2.30E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216016188	2	20146611	A	G	WDR35	CCDS33152.1	r.?	-	-	intronic	43	0	0	74	13	17.56756757	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.868044515	0.868044515	1	0	0.005	0.995	0	0	0	0	3	9.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216016260	2	20785940	C	G	-	-	-	-	-	-	30	0	0	48	7	14.58333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.720588235	0.720588235	1	0.00125	0.02625	0.9725	0	0	0	0	3	4.81E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216016278	2	20989453	C	G	C2orf43	CCDS1702.1	r.?	-	-	intronic	40	0	0	39	6	15.38461538	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.0275	0.9725	0	0	0	0	3	4.43E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216016326	2	21374614	T	G	-	-	-	-	-	-	28	0	0	48	12	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216016431	2	22424238	A	G	-	-	-	-	-	-	36	0	0	74	12	16.21621622	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.80127186	0.80127186	1	0	0.0125	0.9875	0	0	0	0	3	4.02E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216016532	2	23243328	A	G	-	-	-	-	-	-	19	0	0	72	11	15.27777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.754901961	0.754901961	1	0	0.02125	0.97875	0	0	0	0	3	1.12E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216016555	2	23555413	C	G	-	-	-	-	-	-	28	0	0	30	8	26.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0	0.0025	0.9975	0	0	0	0	3	2.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216016563	2	23676859	C	G	KLHL29	ENST00000486442	r.?	-	-	intronic	36	0	0	22	6	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	0.99875	0.00125	0	0	0	3	1.09E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216016830	2	26086770	A	G	ASXL2	ENST00000435504	r.?	-	-	intronic	32	0	0	24	11	45.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.264705882	1.132352941	2	0	0	1	0	0	0	0	3	1.15E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216016907	2	26630027	C	G	C2orf39	CCDS1723.1	r.?	-	-	intronic	38	0	0	41	6	14.63414634	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.723098996	0.723098996	1	0	0.035	0.965	0	0	0	0	3	6.05E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216017038	2	27585928	A	G	EIF2B4	CCDS33164.1	r.?	-	-	downstream	31	0	0	80	9	11.25	0	0	NA	0	0	NA							2.600886584	1	1	0.399113416	2	1	0.600886584	unphased	0.398482094	0.663156916	0.600886584	0.00125	0.06625	0.9325	0	0	0	0	3	3.29E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216017695	2	32803194	A	G	BIRC6	CCDS33175.2	r.?	-	-	intronic	34	0	0	74	16	21.62162162	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06836248	1.06836248	1	0	0.00125	0.99875	0	0	0	0	3	7.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216017818	2	33679745	A	G	RASGRP3	CCDS46256.1	r.?	-	-	intronic	33	0	0	88	16	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.00125	0.99875	0	0	0	0	3	1.57E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216017864	2	34117286	T	G	-	-	-	-	-	-	42	0	0	64	24	37.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.852941176	0.926470588	2	0	0	1	0	0	0	0	3	1.23E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1216017893	2	34274352	C	G	-	-	-	-	-	-	27	0	0	43	9	20.93023256	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.034199726	1.034199726	1	0	0.005	0.995	0	0	0	0	3	9.45E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216017899	2	34355013	T	G	-	-	-	-	-	-	26	0	0	34	5	14.70588235	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.726643599	0.726643599	1	0	0.0225	0.9775	0	0	0	0	3	7.71E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216018243	2	37092210	T	G	STRN	CCDS1784.1	r.?	-	-	intronic	36	0	0	59	11	18.6440678	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.921236291	0.921236291	1	0	0.00125	0.99875	0	0	0	0	3	1.10E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216018469	2	38268342	A	G	FAM82A1	CCDS1792.1	r.?	-	-	intronic	31	0	0	81	21	25.92592593	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.281045752	1.281045752	1	0	0	1	0	0	0	0	3	4.88E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216018511	2	38587880	T	G	ATL2	CCDS46260.1	r.?	-	-	intronic	34	0	0	61	11	18.03278689	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.891031823	0.891031823	1	0	0.00125	0.99875	0	0	0	0	3	1.62E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216018629	2	39319680	T	G	SOS1	CCDS1802.1	r.?	-	-	intronic	32	0	0	95	26	27.36842105	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.352321981	1.352321981	1	0	0	1	0	0	0	0	3	1.60E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216019022	2	42561643	C	G	EML4	CCDS1807.1	r.?	-	-	downstream	39	0	0	61	14	22.95081967	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.134040501	1.134040501	1	0	0.00125	0.99875	0	0	0	0	3	1.10E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216019248	2	44060877	A	G	ABCG5	CCDS1814.1	r.?	-	-	intronic	32	0	0	12	3	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0.00125	0.01375	0.985	0	0	0	0	3	2.66E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216019358	2	44673866	C	G	C2orf34	CCDS1820.1	r.?	-	-	intronic	38	0	0	61	19	31.14754098	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.539054966	0.769527483	2	0	0.0075	0.9925	0	0	0	0	3	4.64E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216019372	2	44769411	T	G	C2orf34	CCDS1820.1	r.?	-	-	intronic	29	0	0	42	4	9.523809524	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.470588235	0.470588235	1	0.0175	0.1475	0.835	0	0	0	0	3	6.01E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216019898	2	49215900	A	G	FSHR	CCDS1843.1	r.?	-	-	intronic	44	0	0	96	19	19.79166667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.977941176	0.977941176	1	0	0.00125	0.99875	0	0	0	0	3	7.42E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216020346	2	53155664	T	G	-	-	-	-	-	-	46	0	0	85	17	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	1.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216020570	2	55033041	A	G	EML6	CCDS46286.1	r.?	-	-	intronic	36	0	0	53	9	16.98113208	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.839067703	0.839067703	1	0	0.005	0.995	0	0	0	0	3	7.10E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216020800	2	56771828	C	G	-	-	-	-	-	-	37	0	0	73	18	24.65753425	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.21837228	1.21837228	1	0	0.00125	0.99875	0	0	0	0	3	1.62E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216020801	2	56774179	C	G	-	-	-	-	-	-	37	0	0	68	15	22.05882353	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.089965398	1.089965398	1	0	0	1	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216020868	2	57480344	C	G	-	-	-	-	-	-	49	0	0	56	6	10.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.529411765	0.529411765	1	0.00875	0.115	0.87625	0	0	0	0	3	4.09E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216020973	2	58235254	A	G	AC068193.1	ENST00000508028	r.?	-	-	downstream	35	0	0	76	20	26.31578947	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.300309598	1.300309598	1	0	0.00125	0.99875	0	0	0	0	3	7.96E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216021582	2	62670589	C	G	-	-	-	-	-	-	40	0	0	37	7	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.00625	0.99375	0	0	0	0	3	7.05E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216021587	2	62725351	C	G	TMEM17	CCDS1871.1	r.?	-	-	downstream	25	0	0	37	8	21.62162162	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06836248	1.06836248	1	0	0.00125	0.99875	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216021828	2	64591495	C	G	-	-	-	-	-	-	30	0	0	26	3	11.53846154	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.570135747	0.570135747	1	0.0175	0.05375	0.92875	0	0	0	0	3	0.000298167	1	1	1	NA	NA	NA
1353824	PD9772b	1216021834	2	64621322	C	G	-	-	-	-	-	-	32	0	0	81	17	20.98765432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.037037037	1.037037037	1	0	0	1	0	0	0	0	3	7.24E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216021981	2	65635389	C	G	SPRED2	CCDS33211.1	r.?	-	-	intronic	45	0	0	88	18	20.45454545	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.010695187	1.010695187	1	0	0.00125	0.99875	0	0	0	0	3	6.62E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216022177	2	67255386	T	G	-	-	-	-	-	-	35	0	0	68	14	20.58823529	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.017301038	1.017301038	1	0	0.0025	0.9975	0	0	0	0	3	5.84E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216022599	2	70398324	T	G	C2orf42	CCDS1899.1	r.?	-	-	intronic	30	0	0	31	6	19.35483871	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.956356736	0.956356736	1	0	0.015	0.985	0	0	0	0	3	1.03E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216023067	2	74146292	C	G	ACTG2	CCDS1930.1	r.?	-	-	intronic	27	0	0	71	17	23.94366197	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.183098592	1.183098592	1	0	0	1	0	0	0	0	3	6.12E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216023437	2	76962104	C	G	-	-	-	-	-	-	41	0	0	93	21	22.58064516	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.115749526	1.115749526	1	0	0	1	0	0	0	0	3	1.25E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216023862	2	80455951	C	G	CTNNA2	CCDS42703.2	r.?	-	-	intronic	38	0	0	78	18	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	6.10E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216023950	2	80958436	A	G	-	-	-	-	-	-	30	0	0	79	13	16.4556962	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.813104989	0.813104989	1	0	0.00875	0.99125	0	0	0	0	3	2.37E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216024077	2	82237084	C	G	-	-	-	-	-	-	42	0	0	76	8	10.52631579	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.520123839	0.520123839	1	0.0075	0.19625	0.79625	0	0	0	0	3	5.44E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216024318	2	84024845	T	G	-	-	-	-	-	-	28	0	0	88	16	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.00375	0.99625	0	0	0	0	3	1.57E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216025256	2	89843773	C	G	-	-	-	-	-	-	68	0	0	152	9	5.921052632	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.292569659	0.292569659	1	0.395	0.60375	0.00125	0	0	0	0	2	9.63E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216029243	2	97776524	C	G	ANKRD36	ENST00000461153	r.?	-	-	upstream	35	0	0	70	13	18.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.917647059	0.917647059	1	0	0.005	0.995	0	0	0	0	3	4.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216029596	2	99145093	A	G	INPP4A	CCDS46369.1	r.?	-	-	intronic	45	0	0	52	7	13.46153846	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.665158371	0.665158371	1	0.0025	0.04	0.9575	0	0	0	0	3	8.58E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216029685	2	99958600	A	G	EIF5B	CCDS42721.1	r.?	-	-	intronic	29	0	0	82	22	26.82926829	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.325681492	1.325681492	1	0	0	1	0	0	0	0	3	9.09E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216029893	2	101590167	A	G	NPAS2	CCDS2048.1	r.?	-	-	intronic	34	0	0	28	5	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0.00125	0.01625	0.9825	0	0	0	0	3	2.79E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216029919	2	101875851	A	G	C2orf29	CCDS2050.1	r.?	-	-	intronic	40	0	0	48	7	14.58333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.720588235	0.720588235	1	0.00125	0.0275	0.97125	0	0	0	0	3	4.81E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216030252	2	104660765	C	G	-	-	-	-	-	-	33	0	0	77	18	23.37662338	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.155080214	1.155080214	1	0	0.00125	0.99875	0	0	0	0	3	4.71E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216030256	2	104700830	A	G	-	-	-	-	-	-	51	0	0	83	15	18.07228916	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	0.8929837	0.8929837	1	0	0.00625	0.99375	0	0	0	0	3	2.70E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216030672	2	108336982	T	G	-	-	-	-	-	-	41	0	0	62	8	12.90322581	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.637571157	0.637571157	1	0.0025	0.06125	0.93625	0	0	0	0	3	1.04E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216031667	2	114727578	C	G	-	-	-	-	-	-	47	0	0	91	23	25.27472527	250	0	0	97	8	8.24742268							4	2	2	1	NA	NA	NA	unphased	1.248868778	1.248868778	1	0	0	1	0	0	0	0	3	1.81E-32	1	3.80E-08	1	YES	somatic	1_1
1353824	PD9772b	1216031695	2	114983438	A	G	-	-	-	-	-	-	33	0	0	85	22	25.88235294	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.278892734	1.278892734	1	0	0	1	0	0	0	0	3	2.23E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216031855	2	116271926	T	G	DPP10	CCDS46400.1	r.?	-	-	intronic	47	0	0	60	11	18.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.905882353	0.905882353	1	0	0.005	0.995	0	0	0	0	3	1.34E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216032039	2	117614658	C	G	-	-	-	-	-	-	45	0	0	87	11	12.64367816	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.62474645	0.62474645	1	0	0.08125	0.91875	0	0	0	0	3	9.65E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216032338	2	119762245	C	G	-	-	-	-	-	-	30	0	0	44	10	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0.00125	0.99875	0	0	0	0	3	2.08E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216032381	2	120023819	A	G	STEAP3	CCDS42738.1	r.?	-	-	downstream	35	0	0	42	11	26.19047619	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.294117647	1.294117647	1	0	0	1	0	0	0	0	3	1.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216032444	2	120515146	C	G	PTPN4	CCDS2129.1	r.?	-	-	upstream	38	0	0	65	13	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0	1	0	0	0	0	3	1.57E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216032642	2	122243515	C	G	CLASP1	ENST00000263710	r.?	-	-	intronic	33	0	0	56	7	12.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.617647059	0.617647059	1	0.00125	0.08	0.91875	0	0	0	0	3	1.46E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216032740	2	122959757	A	G	-	-	-	-	-	-	25	0	0	67	12	17.91044776	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.884986831	0.884986831	1	0	0.0075	0.9925	0	0	0	0	3	1.14E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216032978	2	124670141	C	G	-	-	-	-	-	-	35	0	0	71	10	14.08450704	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.695940348	0.695940348	1	0.00125	0.03125	0.9675	0	0	0	0	3	3.42E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216032982	2	124697362	A	G	-	-	-	-	-	-	35	0	0	72	14	19.44444444	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.960784314	0.960784314	1	0	0.00125	0.99875	0	0	0	0	3	1.39E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216033442	2	129650813	C	G	-	-	-	-	-	-	43	0	0	57	17	29.8245614	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.175438596	1.175438596	1	0	0	1	0	0	0	0	3	8.82E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216034796	2	132872380	A	G	-	-	-	-	-	-	36	0	0	70	21	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0	1	0	0	0	0	3	1.45E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216036017	2	136809162	C	G	-	-	-	-	-	-	37	0	0	63	15	23.80952381	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.93837535	0.93837535	1	0	0.00125	0.99875	0	0	0	0	3	2.97E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216036229	2	138787161	A	G	-	-	-	-	-	-	39	0	0	55	17	30.90909091	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.218181818	1.218181818	1	0	0	1	0	0	0	0	3	4.35E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216036918	2	145162136	A	G	ZEB2	CCDS2186.1	r.?	-	-	intronic	24	0	0	46	10	21.73913043	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.856777494	0.856777494	1	0	0.01	0.99	0	0	0	0	3	3.38E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216037457	2	150430993	A	G	MMADHC	CCDS2189.1	r.?	-	-	intronic	35	0	0	58	20	34.48275862	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.359026369	1.359026369	1	0	0	1	0	0	0	0	3	1.47E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216037526	2	150864794	C	G	-	-	-	-	-	-	32	0	0	75	23	30.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.208627451	1.208627451	1	0	0	1	0	0	0	0	3	1.10E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216037735	2	152844114	A	G	CACNB4	CCDS46426.1	r.?	-	-	intronic	37	0	0	73	14	19.17808219	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.755842063	0.755842063	1	0	0.0175	0.9825	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216038107	2	156868537	A	G	-	-	-	-	-	-	23	0	0	65	17	26.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.030769231	1.030769231	1	0	0.00125	0.99875	0	0	0	0	3	1.14E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216038382	2	160134642	C	G	WDSUB1	CCDS2208.1	r.?	-	-	intronic	35	0	0	63	14	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.00625	0.99375	0	0	0	0	3	1.81E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216038478	2	161054112	T	G	ITGB6	CCDS2212.1	r.?	-	-	intronic	34	0	0	58	17	29.31034483	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.155172414	1.155172414	1	0	0	1	0	0	0	0	3	1.24E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216038576	2	161890583	T	G	-	-	-	-	-	-	40	0	0	79	23	29.11392405	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.147431124	1.147431124	1	0	0	1	0	0	0	0	3	4.43E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216038812	2	165188756	A	G	-	-	-	-	-	-	32	0	0	54	16	29.62962963	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.167755991	1.167755991	1	0	0	1	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216039359	2	170988078	C	G	-	-	-	-	-	-	36	0	0	65	14	21.53846154	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.848868778	0.848868778	1	0	0.0075	0.9925	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216039373	2	171052361	C	G	MYO3B	CCDS42773.1	r.?	-	-	intronic	41	0	0	44	15	34.09090909	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.343582888	1.343582888	1	0	0	1	0	0	0	0	3	6.12E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216039684	2	174233482	T	G	CDCA7	CCDS2252.1	r.2546u>g	c.?	p.?	3'UTR variant	40	0	0	71	16	22.53521127	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.113504557	1.113504557	1	0	0	1	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216039876	2	176072760	A	G	-	-	-	-	-	-	31	0	0	76	21	27.63157895	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.365325077	1.365325077	1	0	0	1	0	0	0	0	3	1.07E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216040032	2	177368536	T	G	-	-	-	-	-	-	33	0	0	83	18	21.68674699	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.071580439	1.071580439	1	0	0	1	0	0	0	0	3	2.09E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216040304	2	179084783	C	G	OSBPL6	CCDS2277.1	r.?	-	-	intronic	41	0	0	67	14	20.89552239	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.032484636	1.032484636	1	0	0.00125	0.99875	0	0	0	0	3	4.66E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216040370	2	179422312	T	G	TTN	ENST00000342992	r.?	-	-	intronic	32	0	0	75	6	8	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.395294118	0.395294118	1	0.07875	0.46125	0.46	0	0	0	0	2	2.34E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216040418	2	179908002	T	G	CCDC141	ENST00000409284	r.?	-	-	intronic	39	0	0	82	21	25.6097561	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.265423242	1.265423242	1	0	0	1	0	0	0	0	3	6.53E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216040551	2	180974684	T	G	-	-	-	-	-	-	39	0	0	70	17	24.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.2	1.2	1	0	0	1	0	0	0	0	3	4.68E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216040573	2	181160625	A	G	-	-	-	-	-	-	26	0	0	79	16	20.25316456	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.000744602	1.000744602	1	0	0.0025	0.9975	0	0	0	0	3	2.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216040715	2	182248679	C	G	-	-	-	-	-	-	36	0	0	85	20	23.52941176	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0	1	0	0	0	0	3	9.82E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216040927	2	184050829	C	G	-	-	-	-	-	-	36	0	0	56	9	16.07142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.794117647	0.794117647	1	0	0.01625	0.98375	0	0	0	0	3	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216041011	2	184899599	C	G	-	-	-	-	-	-	37	0	0	81	19	23.45679012	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.159041394	1.159041394	1	0	0	1	0	0	0	0	3	2.15E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216041158	2	186119635	C	G	-	-	-	-	-	-	35	0	0	81	15	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.005	0.995	0	0	0	0	3	1.82E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216041161	2	186176539	C	G	-	-	-	-	-	-	35	0	0	89	21	23.59550562	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.165895572	1.165895572	1	0	0	1	0	0	0	0	3	4.49E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216041502	2	188777547	A	G	-	-	-	-	-	-	36	0	0	70	8	11.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.564705882	0.564705882	1	0.00625	0.13125	0.8625	0	0	0	0	3	2.80E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216041528	2	188878160	A	G	-	-	-	-	-	-	44	0	0	100	20	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0	1	0	0	0	0	3	3.49E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216041713	2	190389048	C	G	-	-	-	-	-	-	42	0	0	82	18	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0.00125	0.99875	0	0	0	0	3	1.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216041866	2	191643236	A	G	-	-	-	-	-	-	34	0	0	55	18	32.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.617112299	0.80855615	2	0	0.005	0.995	0	0	0	0	3	4.61E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216042200	2	194031967	C	G	-	-	-	-	-	-	33	0	0	88	16	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.0025	0.9975	0	0	0	0	3	1.57E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216042251	2	194518931	T	G	-	-	-	-	-	-	41	0	0	79	20	25.3164557	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.250930752	1.250930752	1	0	0	1	0	0	0	0	3	1.91E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216042635	2	197719849	C	G	PGAP1	CCDS2318.1	r.?	-	-	intronic	25	0	0	45	7	15.55555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.768627451	0.768627451	1	0.00125	0.015	0.98375	0	0	0	0	3	3.00E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216042759	2	198583853	A	G	ENSG00000222017	ENST00000409845	r.?	-	-	intronic	33	0	0	77	13	16.88311688	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.834224599	0.834224599	1	0	0.0075	0.9925	0	0	0	0	3	1.67E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216042811	2	199126980	A	G	-	-	-	-	-	-	33	0	0	66	13	19.6969697	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.973262032	0.973262032	1	0	0.00125	0.99875	0	0	0	0	3	1.95E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216043190	2	201741093	A	G	PPIL3	CCDS2333.1	r.?	-	-	intronic	36	0	0	76	7	9.210526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.455108359	0.455108359	1	0.02	0.37375	0.60625	0	0	0	0	3	1.26E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216043246	2	202079004	A	G	CASP10	CCDS2340.1	r.?	-	-	intronic	35	0	0	87	15	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0	0.00375	0.99625	0	0	0	0	3	5.73E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216043689	2	205106027	C	G	-	-	-	-	-	-	30	0	0	74	18	24.32432432	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.958664547	0.958664547	1	0	0	1	0	0	0	0	3	2.13E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216043980	2	208272682	A	G	-	-	-	-	-	-	33	0	0	64	20	31.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.231617647	1.231617647	1	0	0	1	0	0	0	0	3	1.52E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216044523	2	213472235	C	G	-	-	-	-	-	-	42	0	0	74	21	28.37837838	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.118441971	1.118441971	1	0	0	1	0	0	0	0	3	5.60E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216044701	2	215416880	A	G	VWC2L	CCDS46509.1	r.?	-	-	intronic	40	0	0	61	18	29.50819672	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.162970106	1.162970106	1	0	0	1	0	0	0	0	3	4.08E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216045003	2	218252822	C	G	-	-	-	-	-	-	29	0	0	37	14	37.83783784	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.491255962	1.491255962	1	0	0	1	0	0	0	0	3	3.35E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216045185	2	220514348	T	G	-	-	-	-	-	-	37	0	0	75	22	29.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.156078431	1.156078431	1	0	0	1	0	0	0	0	3	9.55E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216045614	2	224434102	T	G	-	-	-	-	-	-	21	0	0	66	13	19.6969697	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.776292335	0.776292335	1	0	0.01375	0.98625	0	0	0	0	3	1.95E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216046122	2	229497083	T	G	-	-	-	-	-	-	32	0	0	55	13	23.63636364	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.931550802	0.931550802	1	0	0.00625	0.99375	0	0	0	0	3	1.46E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216046257	2	230976242	A	G	-	-	-	-	-	-	44	0	0	58	13	22.4137931	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.88336714	0.88336714	1	0	0.0075	0.9925	0	0	0	0	3	3.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216046766	2	235759672	C	G	-	-	-	-	-	-	34	0	0	40	14	35	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.379411765	1.379411765	1	0	0.00125	0.99875	0	0	0	0	3	1.25E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216046779	2	235959839	T	G	SH3BP4	CCDS2513.1	r.?	-	-	intronic	51	0	0	23	7	30.43478261	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.199488491	1.199488491	1	0	0.00375	0.99625	0	0	0	0	3	1.79E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216047140	2	240535932	A	G	-	-	-	-	-	-	38	0	0	73	15	20.54794521	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.809830782	0.809830782	1	0	0.01375	0.98625	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216047200	2	241334657	T	G	-	-	-	-	-	-	30	0	0	18	10	55.55555556	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	2.189542484	1.094771242	2	0	0.0025	0.9975	0	0	0	0	3	4.12E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216047298	2	242569896	C	G	THAP4	CCDS2551.1	r.?	-	-	intronic	33	0	0	44	6	13.63636364	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.537433155	0.537433155	1	0.00625	0.1425	0.85125	0	0	0	0	3	9.37E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216047825	20	3972129	A	G	RNF24	CCDS13074.1	r.?	-	-	intronic	38	0	0	34	5	14.70588235	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.579584775	0.579584775	1	0.00625	0.0775	0.91625	0	0	0	0	3	7.71E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216048201	20	8095974	A	G	-	-	-	-	-	-	41	0	0	67	10	14.92537313	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.588235294	0.588235294	1	0.00625	0.1125	0.88125	0	0	0	0	3	1.87E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216048332	20	9239070	A	G	PLCB4	CCDS13104.1	r.?	-	-	intronic	35	0	0	30	6	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.02375	0.97625	0	0	0	0	3	8.37E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216049166	20	17777123	C	G	-	-	-	-	-	-	27	0	0	39	8	20.51282051	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.808446456	0.808446456	1	0	0.01875	0.98125	0	0	0	0	3	2.09E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216049350	20	19680890	A	G	SLC24A3	CCDS13140.1	r.?	-	-	intronic	38	0	0	66	20	30.3030303	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.1942959	1.1942959	1	0	0	1	0	0	0	0	3	3.11E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216049402	20	20417049	A	G	RALGAPA2	CCDS46584.1	r.?	-	-	intronic	44	0	0	50	12	24	193	0	0	104	27	25.96153846							3	2	1	1	NA	NA	NA	unphased	0.945882353	0.945882353	1	0	0.0025	0.9975	0	0	0	0	3	2.49E-17	1	3.35E-38	1	YES	somatic	1_1
1353824	PD9772b	1216049474	20	21211807	A	G	-	-	-	-	-	-	37	0	0	39	7	17.94871795	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.707390649	0.707390649	1	0.0025	0.0375	0.96	0	0	0	0	3	1.04E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216049551	20	22126203	A	G	-	-	-	-	-	-	26	0	0	62	13	20.96774194	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.826375712	0.826375712	1	0	0.00875	0.99125	0	0	0	0	3	8.08E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216052315	20	29459152	C	G	-	-	-	-	-	-	85	0	0	154	15	9.74025974	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.286478228	0.286478228	1	0.59875	0.40125	0	0	0	0	0	1	3.91E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216054901	20	30810972	C	G	MIR1825	CCDS13198.1	r.?	-	-	intronic	42	0	0	34	4	11.76470588	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.346020761	0.346020761	1	0.1075	0.46625	0.42625	0	0	0	0	2	2.57E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216055844	20	39736272	A	G	TOP1	CCDS13312.1	r.?	-	-	intronic	52	0	0	64	22	34.375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.354779412	1.354779412	1	0	0	1	0	0	0	0	3	1.57E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216055845	20	39754216	A	G	TOP1	CCDS13312.1	r.?	-	-	downstream	31	0	0	50	11	22	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.867058824	0.867058824	1	0	0.00375	0.99625	0	0	0	0	3	1.52E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216056639	20	49625030	C	G	KCNG1	CCDS13436.1	r.?	-	-	intronic	27	0	0	36	19	52.77777778	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	2.080065359	1.04003268	2	0	0.00125	0.99875	0	0	0	0	3	1.51E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216056718	20	50336558	A	G	ATP9A	CCDS33489.1	r.?	-	-	intronic	27	0	0	45	12	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.0025	0.9975	0	0	0	0	3	6.03E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216056805	20	51277167	A	G	-	-	-	-	-	-	33	0	0	51	12	23.52941176	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.00625	0.99375	0	0	0	0	3	3.24E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216057647	20	59750330	A	G	-	-	-	-	-	-	38	0	0	45	13	28.88888889	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.138562092	1.138562092	1	0	0	1	0	0	0	0	3	7.68E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216059884	21	9733457	A	G	-	-	-	-	-	-	40	0	0	109	9	8.256880734	0	0	NA	0	0	NA							2.450190455	1	1	0.549809545	2	1	0.450190455	unphased	0.280021122	0.622005907	0.450190455	0	0.09	0.91	0	0	0	0	3	5.31E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216062359	21	10088714	A	G	-	-	-	-	-	-	50	0	0	104	11	10.57692308	0	0	NA	0	0	NA							2.450190455	1	1	0.549809545	2	1	0.450190455	unphased	0.358702271	0.796778934	0.450190455	0.00125	0.015	0.98375	0	0	0	0	3	7.11E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216068616	21	15010141	T	G	POTED	CCDS13562.1	r.?	-	-	intronic	53	0	0	91	22	24.17582418	0	0	NA	0	0	NA							2.450190455	1	1	0.549809545	2	1	0.450190455	unphased	0.819890905	0.819890905	1	0	0.00125	0.99875	0	0	0	0	3	1.20E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216069173	21	17018522	T	G	-	-	-	-	-	-	40	0	0	78	15	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0.00125	0.99875	0	0	0	0	3	9.92E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216069197	21	17289352	C	G	-	-	-	-	-	-	31	0	0	76	14	18.42105263	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.910216718	0.910216718	1	0	0	1	0	0	0	0	3	3.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216069208	21	17326907	A	G	-	-	-	-	-	-	26	0	0	62	17	27.41935484	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.35483871	1.35483871	1	0	0.00125	0.99875	0	0	0	0	3	4.56E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216069463	21	19142489	T	G	-	-	-	-	-	-	29	0	0	97	26	26.80412371	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.324439054	1.324439054	1	0	0	1	0	0	0	0	3	2.97E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216069540	21	19748086	C	G	PRSS7	CCDS13571.1	r.?	-	-	intronic	41	0	0	87	19	21.83908046	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.079107505	1.079107505	1	0	0	1	0	0	0	0	3	9.64E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216069707	21	21075824	C	G	-	-	-	-	-	-	37	0	0	85	20	23.52941176	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0	1	0	0	0	0	3	9.82E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216069962	21	22901324	T	G	NCAM2	CCDS42910.1	r.?	-	-	intronic	40	0	0	89	18	20.2247191	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.999339061	0.999339061	1	0	0.00125	0.99875	0	0	0	0	3	8.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216070039	21	23564071	A	G	-	-	-	-	-	-	55	0	0	84	14	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.005	0.995	0	0	0	0	3	1.40E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216070047	21	23631188	T	G	-	-	-	-	-	-	37	0	0	83	13	15.6626506	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.773919206	0.773919206	1	0	0.0125	0.9875	0	0	0	0	3	4.66E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216070146	21	24286395	A	G	-	-	-	-	-	-	51	0	0	71	13	18.30985915	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.904722452	0.904722452	1	0	0.005	0.995	0	0	0	0	3	5.42E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216070191	21	24690282	C	G	-	-	-	-	-	-	35	0	0	22	7	31.81818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.572192513	1.572192513	1	0	0.00125	0.99875	0	0	0	0	3	1.25E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216070269	21	25356930	C	G	-	-	-	-	-	-	39	0	0	82	9	10.97560976	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.542324247	0.542324247	1	0.0025	0.19	0.8075	0	0	0	0	3	4.12E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216070401	21	26039365	A	G	-	-	-	-	-	-	34	0	0	68	18	26.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.307958478	1.307958478	1	0	0	1	0	0	0	0	3	3.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216070463	21	26432424	T	G	-	-	-	-	-	-	28	0	0	73	17	23.28767123	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.150684932	1.150684932	1	0	0	1	0	0	0	0	3	1.03E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216070769	21	28597300	A	G	-	-	-	-	-	-	32	0	0	80	16	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	3.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216071002	21	30021709	T	G	-	-	-	-	-	-	38	0	0	75	11	14.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.724705882	0.724705882	1	0	0.02375	0.97625	0	0	0	0	3	1.78E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216071553	21	34010019	C	G	SYNJ1	CCDS33539.1	r.?	-	-	intronic	26	0	0	48	9	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.005	0.995	0	0	0	0	3	2.75E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216071555	21	34012692	T	G	SYNJ1	CCDS33539.1	r.?	-	-	intronic	35	0	0	33	3	9.090909091	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.449197861	0.449197861	1	0.015	0.11	0.875	0	0	0	0	3	0.000609557	1	1	1	NA	NA	NA
1353824	PD9772b	1216072117	21	38432610	C	G	PIGP	CCDS13649.1	r.?	-	-	downstream	45	0	0	54	13	24.07407407	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.189542484	1.189542484	1	0	0.00125	0.99875	0	0	0	0	3	1.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216072149	21	38645673	C	G	-	-	-	-	-	-	25	0	0	41	8	19.51219512	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.964131994	0.964131994	1	0	0.0025	0.9975	0	0	0	0	3	3.22E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216072327	21	39931141	T	G	ERG	CCDS13657.1	r.?	-	-	intronic	37	0	0	71	12	16.90140845	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.835128418	0.835128418	1	0	0.015	0.985	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216072449	21	40938597	T	G	B3GALT5	CCDS13667.1	r.?	-	-	intronic	36	0	0	56	14	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	2.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216072548	21	41484486	C	G	DSCAM	CCDS42929.1	r.?	-	-	intronic	33	0	0	64	12	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.0075	0.9925	0	0	0	0	3	6.30E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216072833	21	43970729	C	G	SLC37A1	CCDS13689.1	r.?	-	-	intronic	25	0	0	68	9	13.23529412	0	0	NA	0	0	NA							0.032817529	0	0	0.967182471	1	0	0.032817529	unphased	0.128910971	0.128910971	1	0.995	0.005	0	0	0	0	0	1	7.38E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216072915	21	44603430	C	G	-	-	-	-	-	-	31	0	0	45	7	15.55555556	0	0	NA	0	0	NA							0.032817529	0	0	0.967182471	1	0	0.032817529	unphased	0.151510178	0.151510178	1	0.98375	0.01625	0	0	0	0	0	1	3.00E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216073023	21	45855870	C	G	TRPM2	CCDS13710.1	r.?	-	-	intronic	23	0	0	16	3	18.75	0	0	NA	0	0	NA							0.114544422	0	0	0.885455578	1	0	0.114544422	unphased	0.197947667	1.728130128	0.114544422	0	0.00625	0.99375	0	0	0	0	3	6.67E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216073030	21	45952156	C	G	C21orf29	CCDS13712.1	r.?	-	-	intronic	41	0	0	13	6	46.15384615	0	0	NA	0	0	NA							0.114544422	0	0	0.885455578	1	0	0.114544422	unphased	0.487255797	0.487255797	1	0.04375	0.80625	0.15	0	0	0	0	2	2.60E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216075340	22	22440644	C	G	-	-	-	-	-	-	35	0	0	27	10	37.03703704	0	0	NA	0	0	NA							0.35554569	0	0	0.64445431	1	0	0.35554569	unphased	0.480267467	0.480267467	1	0.04	0.87125	0.08875	0	0	0	0	2	7.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216075879	22	25859551	C	G	-	-	-	-	-	-	29	0	0	55	17	30.90909091	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.836363636	0.918181818	2	0	0.00125	0.99875	0	0	0	0	3	4.35E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216076254	22	27810305	T	G	-	-	-	-	-	-	38	0	0	101	13	12.87128713	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0.00125	0.015	0.98375	0	0	0	0	3	6.62E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216076636	22	30349582	C	G	MTMR3	CCDS13871.1	r.?	-	-	intronic	28	0	0	91	12	13.18681319	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.783451842	0.783451842	1	0	0.01625	0.98375	0	0	0	0	3	5.35E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216077440	22	39807481	A	G	TAB1	CCDS13993.1	r.?	-	-	intronic	34	0	0	60	17	28.33333333	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.363485601	1.063713286	0.341713887	0	0	1	0	0	0	0	3	2.41E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216077680	22	42947455	C	G	SERHL2	CCDS14037.1	r.?	-	-	upstream	32	0	0	53	13	24.52830189	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.31467122	0.920861668	0.341713887	0	0.005	0.995	0	0	0	0	3	8.53E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216077919	22	45941466	C	G	FBLN1	CCDS14067.1	r.?	-	-	intronic	39	0	0	28	8	28.57142857	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.366540102	1.072652053	0.341713887	0	0.00125	0.99875	0	0	0	0	3	1.11E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216078271	22	50460213	C	G	TTLL8	CCDS46731.1	r.?	-	-	intronic	31	0	0	25	3	12	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.153946843	0.450513862	0.341713887	0.02375	0.11	0.86625	0	0	0	0	3	0.00026475	1	1	1	NA	NA	NA
1353824	PD9772b	1216078305	22	51040876	T	G	MAPK8IP2	ENST00000399912	r.?	-	-	intronic	26	0	0	32	3	9.375	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.120270971	0.120270971	1	0.92125	0.07875	0	0	0	0	0	1	0.000556213	1	1	1	NA	NA	NA
1353824	PD9772b	1216078643	3	1389200	C	G	CNTN6	CCDS2557.1	r.?	-	-	intronic	41	0	0	60	15	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216078644	3	1392721	C	G	CNTN6	CCDS2557.1	r.?	-	-	intronic	29	0	0	72	19	26.38888889	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.04003268	1.04003268	1	0	0	1	0	0	0	0	3	1.75E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216078842	3	3417283	A	G	-	-	-	-	-	-	43	0	0	66	21	31.81818182	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.254010695	1.254010695	1	0	0	1	0	0	0	0	3	3.42E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216078880	3	3806098	C	G	-	-	-	-	-	-	47	0	0	64	19	29.6875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.170036765	1.170036765	1	0	0	1	0	0	0	0	3	1.34E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216079103	3	5722731	C	G	-	-	-	-	-	-	34	0	0	59	16	27.11864407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.068793619	1.068793619	1	0	0.00125	0.99875	0	0	0	0	3	1.37E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216079553	3	10084343	T	G	FANCD2	CCDS2595.1	r.977u>g	c.884T>G	p.L295R	missense	37	0	0	80	30	37.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.477941176	0.738970588	2	0	0.01375	0.98625	0	0	0	0	3	6.48E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1216079570	3	10103476	C	G	FANCD2	CCDS2595.1	r.?	-	-	intronic	36	0	0	66	23	34.84848485	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.373440285	1.373440285	1	0	0	1	0	0	0	0	3	3.38E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216079714	3	11828339	A	G	C3orf31	CCDS2607.1	r.?	-	-	downstream	41	0	0	20	8	40	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.576470588	1.576470588	1	0	0.00125	0.99875	0	0	0	0	3	4.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216079847	3	13200811	C	G	-	-	-	-	-	-	30	0	0	51	12	23.52941176	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.0025	0.9975	0	0	0	0	3	3.24E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216081020	3	26145769	A	G	-	-	-	-	-	-	42	0	0	53	10	18.86792453	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.743618202	0.743618202	1	0	0.02625	0.97375	0	0	0	0	3	1.57E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216081032	3	26469994	T	G	-	-	-	-	-	-	14	0	0	52	6	11.53846154	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.454751131	0.454751131	1	0.02875	0.2975	0.67375	0	0	0	0	3	2.61E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216081220	3	28206238	C	G	-	-	-	-	-	-	38	0	0	37	11	29.72972973	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.171701113	1.171701113	1	0	0.00125	0.99875	0	0	0	0	3	3.70E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216081318	3	29308597	C	G	-	-	-	-	-	-	28	0	0	41	7	17.07317073	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.672883788	0.672883788	1	0.0025	0.04625	0.95125	0	0	0	0	3	1.51E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216081342	3	29543688	C	G	RBMS3	CCDS33725.1	r.?	-	-	intronic	31	0	0	61	14	22.95081967	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.904532305	0.904532305	1	0	0.0075	0.9925	0	0	0	0	3	1.10E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216081384	3	29995385	T	G	RBMS3	CCDS33725.1	r.?	-	-	intronic	36	0	0	60	10	16.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.656862745	0.656862745	1	0	0.05375	0.94625	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216081405	3	30192143	C	G	-	-	-	-	-	-	40	0	0	66	17	25.75757576	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.015151515	1.015151515	1	0	0	1	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216081451	3	30904715	A	G	GADL1	CCDS2649.2	r.?	-	-	intronic	46	0	0	67	19	28.35820896	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.117647059	1.117647059	1	0	0	1	0	0	0	0	3	3.67E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216081479	3	31309043	C	G	-	-	-	-	-	-	19	0	0	41	6	14.63414634	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.576757532	0.576757532	1	0.005	0.10125	0.89375	0	0	0	0	3	6.05E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216081646	3	33254010	C	G	SUSD5	CCDS46787.1	r.?	-	-	intronic	27	0	0	61	13	21.31147541	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.839922854	0.839922854	1	0	0.0075	0.9925	0	0	0	0	3	6.41E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216082089	3	37559243	C	G	ITGA9	CCDS2669.1	r.?	-	-	intronic	18	0	0	28	8	28.57142857	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0.00375	0.99625	0	0	0	0	3	1.11E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216082391	3	40398395	T	G	-	-	-	-	-	-	42	0	0	80	30	37.5	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.852941176	0.926470588	2	0	0	1	0	0	0	0	3	6.48E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1216082633	3	42330022	C	G	-	-	-	-	-	-	30	0	0	55	25	45.45454545	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.245989305	1.122994652	2	0	0	1	0	0	0	0	3	7.96E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1216082834	3	44209629	T	G	-	-	-	-	-	-	20	0	0	64	15	23.4375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.923713235	0.923713235	1	0	0.00125	0.99875	0	0	0	0	3	3.87E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216082975	3	45950167	C	G	-	-	-	-	-	-	47	0	0	18	8	44.44444444	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.751633987	1.751633987	1	0	0	1	0	0	0	0	3	1.63E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216083049	3	46873217	C	G	PRSS42	CCDS46816.1	r.?	-	-	intronic	43	0	0	71	6	8.450704225	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.333057167	0.333057167	1	0.1625	0.70875	0.12875	0	0	0	0	2	1.69E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216083349	3	50823972	A	G	DOCK3	CCDS46835.1	r.?	-	-	intronic	30	0	0	62	22	35.48387097	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.398481973	0.699240987	2	0	0.05	0.95	0	0	0	0	3	6.75E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216083478	3	52607402	C	G	PBRM1	CCDS2859.1	r.?	-	-	intronic	28	0	0	56	6	10.71428571	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.422268908	0.422268908	1	0.06125	0.4175	0.52125	0	0	0	0	3	4.09E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216083789	3	55857515	C	G	ERC2	CCDS46851.1	r.?	-	-	intronic	34	0	0	62	18	29.03225806	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.144212524	1.144212524	1	0	0	1	0	0	0	0	3	5.72E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216084020	3	57981453	C	G	-	-	-	-	-	-	40	0	0	41	11	26.82926829	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.057388809	1.057388809	1	0	0	1	0	0	0	0	3	1.34E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216084080	3	58611271	C	G	FAM107A	ENST00000474531	r.?	-	-	intronic	33	0	0	43	11	25.58139535	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.008207934	1.008207934	1	0	0.0025	0.9975	0	0	0	0	3	2.42E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216084084	3	58686549	T	G	-	-	-	-	-	-	39	0	0	69	15	21.73913043	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.856777494	0.856777494	1	0	0.00375	0.99625	0	0	0	0	3	1.34E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216084111	3	59209624	C	G	-	-	-	-	-	-	36	0	0	61	17	27.86885246	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.098360656	1.098360656	1	0	0	1	0	0	0	0	3	3.33E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216084878	3	67147238	C	G	-	-	-	-	-	-	24	0	0	71	14	19.71830986	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.777133389	0.777133389	1	0	0.005	0.995	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216085184	3	69967955	A	G	MITF	CCDS43106.1	r.?	-	-	intronic	28	0	0	73	18	24.65753425	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.971796938	0.971796938	1	0	0	1	0	0	0	0	3	1.62E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216085370	3	71763590	C	G	EIF4E3	CCDS33786.1	r.?	-	-	intronic	32	0	0	52	17	32.69230769	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.288461538	1.288461538	1	0	0	0.99875	0.00125	0	0	0	3	1.42E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216088158	3	81914135	A	G	-	-	-	-	-	-	33	0	0	45	7	15.55555556	0	0	NA	2	0	0							3	2	1	1	NA	NA	NA	unphased	0.613071895	0.613071895	1	0.00125	0.06	0.93875	0	0	0	0	3	3.00E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216088202	3	82492547	A	G	-	-	-	-	-	-	26	0	0	64	22	34.375	200	0	0	119	28	23.52941176							3	2	1	1	NA	NA	NA	unphased	1.354779412	1.354779412	1	0	0	1	0	0	0	0	3	1.57E-34	1	3.24E-38	1	YES	somatic	1_1
1353824	PD9772b	1216088334	3	84195648	T	G	-	-	-	-	-	-	42	0	0	62	16	25.80645161	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.017077799	1.017077799	1	0	0.00125	0.99875	0	0	0	0	3	3.36E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216088797	3	89101874	T	G	-	-	-	-	-	-	43	0	0	76	11	14.47368421	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.715170279	0.715170279	1	0	0.025	0.975	0	0	0	0	3	2.08E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216088815	3	89235186	T	G	EPHA3	CCDS2922.1	r.?	-	-	intronic	42	0	0	80	15	18.75	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0	1	0	0	0	0	3	1.49E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216088823	3	89360230	A	G	EPHA3	CCDS2922.1	r.?	-	-	intronic	37	0	0	86	17	19.76744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976744186	0.976744186	1	0	0	1	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216088840	3	89490412	T	G	EPHA3	CCDS2922.1	r.?	-	-	intronic	40	0	0	94	30	31.91489362	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.576971214	0.788485607	2	0	0.00125	0.99875	0	0	0	0	3	2.21E-45	1	1	1	NA	NA	NA
1353824	PD9772b	1216089594	3	94886851	A	G	-	-	-	-	-	-	41	0	0	74	20	27.02702703	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.3354531	1.3354531	1	0	0	1	0	0	0	0	3	4.34E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216089922	3	97296861	A	G	EPHA6	CCDS46876.1	r.?	-	-	intronic	33	0	0	76	11	14.47368421	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.715170279	0.715170279	1	0.0025	0.03375	0.96375	0	0	0	0	3	2.08E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216089923	3	97303057	A	G	EPHA6	CCDS46876.1	r.?	-	-	intronic	34	0	0	58	10	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0	0.01125	0.98875	0	0	0	0	3	4.10E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216090151	3	99225925	A	G	-	-	-	-	-	-	44	0	0	66	12	18.18181818	242	0	0	103	14	13.59223301							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.00625	0.99375	0	0	0	0	3	9.36E-16	1	2.77E-16	1	YES	somatic	1_1
1353824	PD9772b	1216090389	3	100988273	A	G	IMPG2	CCDS2940.1	r.?	-	-	intronic	32	0	0	84	15	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.00375	0.99625	0	0	0	0	3	3.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216090495	3	101706899	A	G	-	-	-	-	-	-	28	0	0	74	6	8.108108108	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.481717011	0.481717011	1	0.0125	0.17	0.8175	0	0	0	0	3	2.16E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216090548	3	101930707	T	G	ZPLD1	ENST00000491959	r.?	-	-	intronic	47	0	0	91	34	37.36263736	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.21978022	1.10989011	2	0	0	1	0	0	0	0	3	4.98E-54	1	1	1	NA	NA	NA
1353824	PD9772b	1216090704	3	103383724	T	G	-	-	-	-	-	-	27	0	0	75	21	28	301	0	0	613	86	14.02936378							4	2	2	1	NA	NA	NA	unphased	1.383529412	1.383529412	1	0	0	1	0	0	0	0	3	7.75E-31	1	3.94E-93	1	YES	somatic	1_1
1353824	PD9772b	1216092145	3	116182024	A	G	LSAMP	ENST00000474851	r.?	-	-	intronic	35	0	0	83	21	25.30120482	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.997165131	0.997165131	1	0	0	1	0	0	0	0	3	8.70E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216092181	3	116448112	C	G	LSAMP	ENST00000474851	r.?	-	-	intronic	32	0	0	54	11	20.37037037	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.802832244	0.802832244	1	0	0.01375	0.98625	0	0	0	0	3	3.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216092524	3	119685634	C	G	GSK3B	CCDS2996.1	r.?	-	-	intronic	26	0	0	42	12	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	2.35E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216093268	3	126107032	A	G	-	-	-	-	-	-	32	0	0	20	7	35	1	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.379411765	1.379411765	1	0	0.0025	0.9975	0	0	0	0	3	5.72E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216093512	3	129231528	C	G	IFT122	CCDS3060.1	r.?	-	-	intronic	33	0	0	22	10	45.45454545	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.79144385	0.895721925	2	0	0.00375	0.99625	0	0	0	0	3	5.98E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216093782	3	130968607	A	G	NEK11	CCDS3069.1	r.?	-	-	intronic	34	0	0	55	9	16.36363636	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.644919786	0.644919786	1	0.0025	0.05625	0.94125	0	0	0	0	3	1.01E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216093852	3	131647314	C	G	CPNE4	CCDS3072.1	r.?	-	-	intronic	29	0	0	67	15	22.3880597	230	1	0.434782609	411	62	15.08515815							3	2	1	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.005	0.995	0	0	0	0	3	8.27E-21	1	1.10E-69	0.684275291	YES	somatic	1_1
1353824	PD9772b	1216093860	3	131761223	A	G	CPNE4	CCDS3072.1	r.?	-	-	upstream	34	0	0	69	11	15.94202899	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.628303495	0.628303495	1	0.00125	0.08	0.91875	0	0	0	0	3	6.82E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216094439	3	138029463	C	G	TXNDC6	CCDS3099.1	r.?	-	-	intronic	38	0	0	63	15	23.80952381	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.93837535	0.93837535	1	0	0.00125	0.99875	0	0	0	0	3	2.97E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216094578	3	139611444	A	G	-	-	-	-	-	-	39	0	0	70	15	21.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.844537815	0.844537815	1	0	0.01	0.99	0	0	0	0	3	1.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216094606	3	140017809	C	G	CLSTN2	CCDS3112.1	r.?	-	-	intronic	32	0	0	32	12	37.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.477941176	1.477941176	1	0	0	1	0	0	0	0	3	5.03E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216094756	3	141718010	T	G	TFDP2	CCDS43159.1	r.?	-	-	intronic	32	0	0	52	13	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	6.47E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216094814	3	142275021	A	G	ATR	CCDS3124.1	r.?	-	-	intronic	34	0	0	73	26	35.61643836	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.403706688	0.701853344	2	0	0.03875	0.96125	0	0	0	0	3	5.09E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1216095149	3	145858250	A	G	PLOD2	CCDS3132.1	r.?	-	-	intronic	38	0	0	85	19	22.35294118	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.880968858	0.880968858	1	0	0	1	0	0	0	0	3	5.93E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216095592	3	150576783	C	G	-	-	-	-	-	-	47	0	0	61	16	26.2295082	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.033751205	1.033751205	1	0	0	1	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216095597	3	150638472	C	G	-	-	-	-	-	-	30	0	0	66	10	15.15151515	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.59714795	0.59714795	1	0.00125	0.12625	0.8725	0	0	0	0	3	1.60E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216095954	3	154043191	C	G	DHX36	CCDS3171.1	r.?	-	-	upstream	44	0	0	64	10	15.625	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.615808824	0.615808824	1	0.00125	0.09	0.90875	0	0	0	0	3	1.16E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216097157	3	166957817	A	G	ZBBX	CCDS3199.2	r.?	-	-	downstream	43	0	0	74	16	21.62162162	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.852146264	0.852146264	1	0	0.0075	0.9925	0	0	0	0	3	7.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216097332	3	169214985	C	G	MECOM	ENST00000494292	r.?	-	-	intronic	42	0	0	49	12	24.48979592	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.965186074	0.965186074	1	0	0.00125	0.99875	0	0	0	0	3	1.90E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216097385	3	169969051	A	G	PRKCI	CCDS3212.2	r.?	-	-	intronic	41	0	0	56	12	21.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.844537815	0.844537815	1	0	0.00375	0.99625	0	0	0	0	3	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216097687	3	173175221	A	G	NLGN1	CCDS3222.1	r.?	-	-	intronic	33	0	0	74	16	21.62162162	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.852146264	0.852146264	1	0	0.00375	0.99625	0	0	0	0	3	7.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216098003	3	176368250	C	G	-	-	-	-	-	-	35	0	0	38	9	23.68421053	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.933436533	0.933436533	1	0	0.00625	0.99375	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216098377	3	179813390	A	G	-	-	-	-	-	-	44	0	0	70	18	25.71428571	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.013445378	1.013445378	1	0	0	1	0	0	0	0	3	6.91E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216098424	3	180280239	A	G	-	-	-	-	-	-	36	0	0	62	15	24.19354839	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.953510436	0.953510436	1	0	0	1	0	0	0	0	3	2.28E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216098437	3	180386623	C	G	CCDC39	CCDS46964.1	r.?	-	-	intronic	38	0	0	54	13	24.07407407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.948801743	0.948801743	1	0	0.00125	0.99875	0	0	0	0	3	1.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216098510	3	181044606	T	G	-	-	-	-	-	-	43	0	0	66	20	30.3030303	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.1942959	1.1942959	1	0	0	1	0	0	0	0	3	3.11E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216098654	3	182614298	A	G	ATP11B	CCDS33896.1	r.?	-	-	intronic	38	0	0	59	13	22.03389831	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.868394816	0.868394816	1	0	0.00375	0.99625	0	0	0	0	3	3.99E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216098748	3	183464314	C	G	YEATS2	CCDS43175.1	r.?	-	-	intronic	27	0	0	62	16	25.80645161	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.017077799	1.017077799	1	0	0	1	0	0	0	0	3	3.36E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216099235	3	187897512	T	G	ENSG00000213132	ENST00000392468	r.570u>g	c.?	p.?	3'UTR variant	23	0	0	32	6	18.75	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.738970588	0.738970588	1	0	0.02875	0.97125	0	0	0	0	3	1.27E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216099623	3	190599381	A	G	-	-	-	-	-	-	32	0	0	81	14	17.28395062	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.854030501	0.854030501	1	0	0.005	0.995	0	0	0	0	3	8.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216099658	3	190885000	C	G	-	-	-	-	-	-	30	0	0	75	11	14.66666667	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.724705882	0.724705882	1	0	0.02375	0.97625	0	0	0	0	3	1.78E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216100023	3	193740250	T	G	-	-	-	-	-	-	20	0	0	73	16	21.91780822	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.082997583	1.082997583	1	0	0.00125	0.99875	0	0	0	0	3	6.15E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216100046	3	193907799	T	G	-	-	-	-	-	-	37	0	0	81	16	19.75308642	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.976034858	0.976034858	1	0	0	1	0	0	0	0	3	3.77E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216100106	3	194531017	A	G	-	-	-	-	-	-	28	0	0	63	14	22.22222222	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.0025	0.9975	0	0	0	0	3	1.81E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216100651	3	196606535	A	G	SENP5	CCDS3322.1	r.?	-	-	intronic	32	0	0	72	20	27.77777778	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.37254902	1.37254902	1	0	0	1	0	0	0	0	3	2.32E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216101707	4	5332124	T	G	STK32B	CCDS3380.1	r.?	-	-	intronic	39	0	0	51	12	23.52941176	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.00375	0.99625	0	0	0	0	3	3.24E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216101722	4	5404937	A	G	STK32B	CCDS3380.1	r.?	-	-	intronic	27	0	0	28	8	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0.0025	0.9975	0	0	0	0	3	1.11E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216102099	4	9519253	C	G	-	-	-	-	-	-	39	0	0	16	3	18.75	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.738970588	0.738970588	1	0.0025	0.02875	0.96875	0	0	0	0	3	6.67E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216102419	4	11963053	T	G	-	-	-	-	-	-	33	0	0	75	26	34.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.36627451	0.683137255	2	0	0.05375	0.94625	0	0	0	0	3	1.19E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216102793	4	15923338	C	G	-	-	-	-	-	-	19	0	0	70	19	27.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.069747899	1.069747899	1	0	0	1	0	0	0	0	3	9.50E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216103352	4	21580097	A	G	KCNIP4	CCDS43217.1	r.?	-	-	intronic	35	0	0	32	11	34.375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.354779412	1.354779412	1	0	0	1	0	0	0	0	3	5.72E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216103947	4	27185881	C	G	-	-	-	-	-	-	42	0	0	71	20	28.16901408	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.110190555	1.110190555	1	0	0	1	0	0	0	0	3	1.68E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216104782	4	34827461	A	G	-	-	-	-	-	-	44	0	0	46	12	26.08695652	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.028132992	1.028132992	1	0	0.0025	0.9975	0	0	0	0	3	8.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216105487	4	41137859	T	G	APBB2	CCDS3837.1	r.?	-	-	intronic	41	0	0	86	17	19.76744186	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.779069767	0.779069767	1	0	0.0075	0.9925	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216106370	4	48039506	C	G	NIPAL1	CCDS3479.1	r.2616c>g	c.?	p.?	3'UTR variant	27	0	0	97	17	17.5257732	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.865979381	0.865979381	1	0	0.0025	0.9975	0	0	0	0	3	1.97E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216106492	4	48917230	A	G	-	-	-	-	-	-	29	0	0	94	21	22.34042553	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.10387985	1.10387985	1	0	0	1	0	0	0	0	3	1.60E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216110798	4	53434640	T	G	-	-	-	-	-	-	38	0	0	91	19	20.87912088	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.031674208	1.031674208	1	0	0	1	0	0	0	0	3	2.46E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216110991	4	54988318	A	G	FIP1L1	ENST00000507166	r.?	-	-	intronic	42	0	0	74	17	22.97297297	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.135135135	1.135135135	1	0	0	1	0	0	0	0	3	1.34E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216111776	4	60644044	A	G	-	-	-	-	-	-	37	0	0	75	17	22.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.12	1.12	1	0	0	1	0	0	0	0	3	1.72E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216111839	4	61089482	T	G	-	-	-	-	-	-	37	0	0	81	14	17.28395062	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.854030501	0.854030501	1	0	0.00375	0.99625	0	0	0	0	3	8.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216111952	4	62048224	A	G	-	-	-	-	-	-	47	0	0	98	23	23.46938776	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.159663866	1.159663866	1	0	0	1	0	0	0	0	3	1.22E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216112314	4	64973273	C	G	-	-	-	-	-	-	43	0	0	95	26	27.36842105	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.352321981	1.352321981	1	0	0	1	0	0	0	0	3	1.60E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216112375	4	65386629	C	G	-	-	-	-	-	-	51	0	0	73	17	23.28767123	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.150684932	1.150684932	1	0	0	1	0	0	0	0	3	1.03E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216112489	4	66135953	C	G	-	-	-	-	-	-	33	0	0	70	17	24.28571429	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	1.2	1.2	1	0	0.00125	0.99875	0	0	0	0	3	4.68E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216112799	4	68611564	C	G	GNRHR	CCDS3517.1	r.?	-	-	intronic	41	0	0	93	15	16.12903226	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.796963947	0.796963947	1	0	0.01125	0.98875	0	0	0	0	3	1.65E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216113130	4	70750658	A	G	-	-	-	-	-	-	33	0	0	73	16	21.91780822	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.082997583	1.082997583	1	0	0	1	0	0	0	0	3	6.15E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216113335	4	72062172	A	G	SLC4A4	CCDS47071.1	r.?	-	-	intronic	40	0	0	51	10	19.60784314	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.968858131	0.968858131	1	0	0.00625	0.99375	0	0	0	0	3	1.04E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216113568	4	74004372	T	G	ANKRD17	CCDS34004.1	r.?	-	-	intronic	30	0	0	78	16	20.51282051	121	0	0	172	27	15.69767442							4	2	2	1	NA	NA	NA	unphased	1.013574661	1.013574661	1	0	0.00125	0.99875	0	0	0	0	3	1.96E-21	1	9.01E-32	1	YES	somatic	1_1
1353824	PD9772b	1216113672	4	74697245	C	G	CXCL6	CCDS3560.1	r.?	-	-	upstream	25	0	0	72	18	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216113730	4	75193102	A	G	-	-	-	-	-	-	25	0	0	66	17	25.75757576	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.272727273	1.272727273	1	0	0	1	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216114495	4	80791632	A	G	-	-	-	-	-	-	45	0	0	96	17	17.70833333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.875	0.875	1	0	0.0025	0.9975	0	0	0	0	3	1.64E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216114791	4	83150884	A	G	-	-	-	-	-	-	34	0	0	77	14	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.00875	0.99125	0	0	0	0	3	3.82E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216115003	4	84760560	C	G	-	-	-	-	-	-	44	0	0	67	18	26.86567164	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.327480246	1.327480246	1	0	0	1	0	0	0	0	3	2.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216115042	4	85019042	C	G	-	-	-	-	-	-	40	0	0	76	17	22.36842105	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.105263158	1.105263158	1	0	0.00125	0.99875	0	0	0	0	3	2.21E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216115083	4	85537762	A	G	CDS1	CCDS3608.1	r.?	-	-	intronic	36	0	0	87	28	32.18390805	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.590263692	0.795131846	2	0	0	1	0	0	0	0	3	1.40E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1216115088	4	85567828	A	G	CDS1	CCDS3608.1	r.?	-	-	intronic	31	0	0	90	19	21.11111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.043137255	1.043137255	1	0	0	1	0	0	0	0	3	1.95E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216115379	4	87963054	C	G	AFF1	CCDS3616.1	r.?	-	-	intronic	21	0	0	58	14	24.13793103	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.192697769	1.192697769	1	0	0.00125	0.99875	0	0	0	0	3	5.04E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216115400	4	88127242	T	G	KLHL8	CCDS3617.1	r.?	-	-	intronic	31	0	0	75	12	16	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0	0.01125	0.98875	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216115427	4	88315311	A	G	HSD17B11	CCDS3619.1	r.?	-	-	upstream	33	0	0	74	17	22.97297297	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.135135135	1.135135135	1	0	0	1	0	0	0	0	3	1.34E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216115431	4	88334664	C	G	-	-	-	-	-	-	40	0	0	73	11	15.06849315	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.744560838	0.744560838	1	0	0.0225	0.9775	0	0	0	0	3	1.31E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216115901	4	91863661	A	G	FAM190A	CCDS47099.1	r.?	-	-	intronic	29	0	0	90	17	18.88888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.933333333	0.933333333	1	0	0	1	0	0	0	0	3	5.05E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216116050	4	93870842	A	G	GRID2	CCDS3637.1	r.?	-	-	intronic	40	0	0	83	19	22.89156627	317	0	0	690	57	8.260869565							4	2	2	1	NA	NA	NA	unphased	1.131112686	1.131112686	1	0	0	1	0	0	0	0	3	3.60E-26	1	4.58E-49	1	YES	somatic	1_1
1353824	PD9772b	1216116409	4	96826123	T	G	-	-	-	-	-	-	32	0	0	80	14	17.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.864705882	0.864705882	1	0	0.00125	0.99875	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216116561	4	98489051	C	G	C4orf37	CCDS3645.1	r.?	-	-	intronic	32	0	0	75	21	28	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.383529412	1.383529412	1	0	0.00125	0.99875	0	0	0	0	3	7.75E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216116770	4	99968905	C	G	METAP1	CCDS47110.1	r.?	-	-	intronic	30	0	0	61	4	6.557377049	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.324011572	0.324011572	1	0.12875	0.4525	0.41875	0	0	0	0	2	0.000259828	1	1	1	NA	NA	NA
1353824	PD9772b	1216117429	4	104545231	C	G	TACR3	CCDS3664.1	r.?	-	-	intronic	33	0	0	92	19	20.65217391	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.020460358	1.020460358	1	0	0	1	0	0	0	0	3	3.08E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216117442	4	104669066	A	G	-	-	-	-	-	-	32	0	0	87	21	24.13793103	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.192697769	1.192697769	1	0	0	1	0	0	0	0	3	2.64E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216117680	4	106583486	A	G	ENSG00000236699	ENST00000420470	r.?	-	-	intronic	29	0	0	76	18	23.68421053	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.170278638	1.170278638	1	0	0	1	0	0	0	0	3	3.63E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216117722	4	106925976	T	G	NPNT	ENST00000505917	r.?	-	-	downstream	29	0	0	69	15	21.73913043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.074168798	1.074168798	1	0	0.00125	0.99875	0	0	0	0	3	1.34E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216117815	4	107849420	C	G	DKK2	CCDS3675.1	r.?	-	-	intronic	36	0	0	83	14	16.86746988	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.833451453	0.833451453	1	0	0.00625	0.99375	0	0	0	0	3	1.17E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216117897	4	108594812	A	G	PAPSS1	CCDS3676.1	r.?	-	-	intronic	47	0	0	92	13	14.13043478	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.698209719	0.698209719	1	0	0.04375	0.95625	0	0	0	0	3	1.89E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216117942	4	108933922	T	G	HADH	CCDS3678.1	r.?	-	-	intronic	35	0	0	59	9	15.25423729	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.753738784	0.753738784	1	0	0.0225	0.9775	0	0	0	0	3	1.96E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216118407	4	112233986	A	G	-	-	-	-	-	-	40	0	0	59	13	22.03389831	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.088733799	1.088733799	1	0	0.0025	0.9975	0	0	0	0	3	3.99E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216118735	4	114764414	T	G	-	-	-	-	-	-	41	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0.005	0.995	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216118756	4	114871435	C	G	ARSJ	CCDS43264.1	r.?	-	-	intronic	32	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.0025	0.9975	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216119095	4	117524953	C	G	-	-	-	-	-	-	35	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0	1	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216119515	4	120371710	A	G	-	-	-	-	-	-	39	0	0	68	18	26.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.307958478	1.307958478	1	0	0	1	0	0	0	0	3	3.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216119673	4	121837664	C	G	PRDM5	CCDS3716.1	r.?	-	-	intronic	34	0	0	83	12	14.45783133	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.71438696	0.71438696	1	0	0.0175	0.9825	0	0	0	0	3	1.70E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216119697	4	121953521	A	G	C4orf31	CCDS3717.2	r.?	-	-	downstream	35	0	0	78	20	25.64102564	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.266968326	1.266968326	1	0	0	1	0	0	0	0	3	1.43E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216119843	4	123068521	A	G	KIAA1109	CCDS43267.1	r.?	-	-	upstream	33	0	0	87	18	20.68965517	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.022312373	1.022312373	1	0	0	1	0	0	0	0	3	5.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216119916	4	123730669	A	G	-	-	-	-	-	-	45	0	0	79	17	21.51898734	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.063291139	1.063291139	1	0	0	1	0	0	0	0	3	4.55E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216120255	4	126501058	T	G	-	-	-	-	-	-	43	0	0	85	13	15.29411765	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.755709343	0.755709343	1	0	0.025	0.975	0	0	0	0	3	6.45E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216120768	4	130993233	C	G	-	-	-	-	-	-	36	0	0	72	15	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.00125	0.99875	0	0	0	0	3	2.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216120851	4	131624869	C	G	-	-	-	-	-	-	32	0	0	70	16	22.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.129411765	1.129411765	1	0	0	1	0	0	0	0	3	2.93E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216121272	4	133443731	A	G	-	-	-	-	-	-	30	0	0	40	7	17.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.864705882	0.864705882	1	0	0.01125	0.98875	0	0	0	0	3	1.26E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216121430	4	134775933	C	G	-	-	-	-	-	-	35	0	0	64	9	14.0625	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.694852941	0.694852941	1	0	0.0425	0.9575	0	0	0	0	3	4.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216121708	4	137070813	A	G	-	-	-	-	-	-	40	0	0	72	7	9.722222222	229	1	0.436681223	326	34	10.42944785							4	2	2	1	NA	NA	NA	unphased	0.480392157	0.480392157	1	0.025	0.24	0.735	0	0	0	0	3	8.66E-08	1	2.25E-33	0.682688735	YES	somatic	1_1
1353824	PD9772b	1216121779	4	137827884	C	G	-	-	-	-	-	-	39	0	0	82	13	15.85365854	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.783357245	0.783357245	1	0	0.015	0.985	0	0	0	0	3	3.95E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216122062	4	140011398	T	G	ELF2	CCDS3744.1	r.?	-	-	intronic	34	0	0	81	21	25.92592593	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.281045752	1.281045752	1	0	0	1	0	0	0	0	3	4.88E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216122259	4	141235228	A	G	SCOC	CCDS3750.1	r.?	-	-	intronic	34	0	0	39	6	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.03625	0.96375	0	0	0	0	3	4.43E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216122369	4	142115619	C	G	RNF150	ENST00000420921	r.?	-	-	intronic	32	0	0	90	18	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0	1	0	0	0	0	3	1.03E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216122384	4	142271363	C	G	-	-	-	-	-	-	35	0	0	77	15	19.48051948	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.962566845	0.962566845	1	0	0.00125	0.99875	0	0	0	0	3	8.05E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216122407	4	142488170	T	G	-	-	-	-	-	-	25	0	0	69	9	13.04347826	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.644501279	0.644501279	1	0	0.05625	0.94375	0	0	0	0	3	8.45E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216122610	4	144257590	C	G	GAB1	CCDS3760.1	r.?	-	-	upstream	33	0	0	6	3	50	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.470588235	2.470588235	1	0	0.00375	0.995	0	0	0	0.00125	3	2.47E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216122745	4	144934535	C	G	GYPB	CCDS3085.1	r.?	-	-	intronic	27	0	0	75	19	25.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.251764706	1.251764706	1	0	0	1	0	0	0	0	3	4.19E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216123166	4	147808292	A	G	TTC29	CCDS47141.1	r.?	-	-	intronic	36	0	0	83	17	20.48192771	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.012048193	1.012048193	1	0	0.0025	0.9975	0	0	0	0	3	1.14E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216123208	4	148226768	A	G	-	-	-	-	-	-	41	0	0	78	14	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0	1	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216123460	4	149988894	C	G	-	-	-	-	-	-	28	0	0	74	12	16.21621622	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.80127186	0.80127186	1	0	0.0175	0.9825	0	0	0	0	3	4.02E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216123475	4	150075658	C	G	-	-	-	-	-	-	45	0	0	70	11	15.71428571	209	0	0	260	28	10.76923077							4	2	2	1	NA	NA	NA	unphased	0.776470588	0.776470588	1	0	0.01375	0.98625	0	0	0	0	3	8.06E-14	1	3.67E-28	1	YES	somatic	1_1
1353824	PD9772b	1216123582	4	151163763	C	G	DCLK2	CCDS34076.1	r.?	-	-	intronic	33	0	0	50	12	24	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.185882353	1.185882353	1	0	0.0025	0.9975	0	0	0	0	3	2.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216123877	4	153639825	A	G	-	-	-	-	-	-	38	0	0	74	12	16.21621622	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.80127186	0.80127186	1	0	0.01	0.99	0	0	0	0	3	4.02E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216123897	4	153846368	C	G	-	-	-	-	-	-	30	0	0	70	13	18.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.917647059	0.917647059	1	0	0.00375	0.99625	0	0	0	0	3	4.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216124196	4	156269134	A	G	MAP9	CCDS35493.1	r.?	-	-	intronic	31	0	0	70	12	17.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.847058824	0.847058824	1	0	0.005	0.995	0	0	0	0	3	1.99E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216124223	4	156451255	C	G	-	-	-	-	-	-	28	0	0	73	18	24.65753425	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.21837228	1.21837228	1	0	0	1	0	0	0	0	3	1.62E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216124353	4	157396531	T	G	-	-	-	-	-	-	34	0	0	78	12	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.01875	0.98125	0	0	0	0	3	7.82E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216124640	4	159785843	C	G	FNIP2	CCDS47155.1	r.?	-	-	intronic	32	0	0	64	9	14.0625	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.694852941	0.694852941	1	0.0025	0.0575	0.94	0	0	0	0	3	4.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216124693	4	160062514	C	G	RAPGEF2	ENST00000505478	r.?	-	-	intronic	47	0	0	58	10	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0	0.01375	0.98625	0	0	0	0	3	4.10E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216124767	4	160595895	T	G	-	-	-	-	-	-	35	0	0	38	9	23.68421053	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.170278638	1.170278638	1	0	0.00125	0.99875	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216125142	4	163223771	C	G	-	-	-	-	-	-	35	0	0	65	22	33.84615385	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.67239819	0.836199095	2	0	0.00125	0.99875	0	0	0	0	3	2.36E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216125250	4	163854843	A	G	-	-	-	-	-	-	40	0	0	80	16	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.0025	0.9975	0	0	0	0	3	3.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216125287	4	164169838	A	G	-	-	-	-	-	-	41	0	0	83	16	19.27710843	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.952515946	0.952515946	1	0	0.00375	0.99625	0	0	0	0	3	5.75E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216125370	4	164695237	C	G	Mar-01	CCDS45732.1	r.?	-	-	intronic	30	0	0	97	15	15.46391753	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.764099454	0.764099454	1	0	0.01375	0.98625	0	0	0	0	3	3.21E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216125774	4	167673090	A	G	SPOCK3	CCDS34095.1	r.?	-	-	intronic	40	0	0	64	21	32.8125	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.293198529	1.293198529	1	0	0	1	0	0	0	0	3	1.60E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216126161	4	170747729	T	G	-	-	-	-	-	-	42	0	0	16	3	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0.005	0.02	0.975	0	0	0	0	3	6.67E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216126522	4	173533674	C	G	GALNTL6	CCDS34104.1	r.?	-	-	intronic	35	0	0	78	12	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.02875	0.97125	0	0	0	0	3	7.82E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216126833	4	175866256	A	G	ADAM29	CCDS3823.1	r.?	-	-	intronic	29	0	0	80	13	16.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.802941176	0.802941176	1	0	0.01	0.99	0	0	0	0	3	2.82E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216126939	4	176807571	A	G	GPM6A	CCDS3824.1	r.?	-	-	intronic	29	0	0	69	18	26.08695652	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.289002558	1.289002558	1	0	0	1	0	0	0	0	3	5.16E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216126946	4	176812953	C	G	GPM6A	CCDS3824.1	r.?	-	-	intronic	47	0	0	84	15	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.00625	0.99375	0	0	0	0	3	3.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216127287	4	179314398	A	G	-	-	-	-	-	-	31	0	0	70	13	18.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.917647059	0.917647059	1	0	0.005	0.995	0	0	0	0	3	4.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216127570	4	181357503	T	G	-	-	-	-	-	-	25	0	0	80	16	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0	1	0	0	0	0	3	3.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216127611	4	181587395	C	G	-	-	-	-	-	-	30	0	0	73	13	17.80821918	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.879935536	0.879935536	1	0	0.005	0.995	0	0	0	0	3	7.97E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216127976	4	184133248	A	G	WWC2	CCDS34109.2	r.?	-	-	intronic	36	0	0	45	10	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.0025	0.9975	0	0	0	0	3	2.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216128385	4	186780653	C	G	SORBS2	CCDS3845.1	r.?	-	-	intronic	32	0	0	84	17	20.23809524	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1	1	1	0	0	1	0	0	0	0	3	1.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216128445	4	187183282	A	G	F11	CCDS3847.1	r.?	-	-	upstream	31	0	0	33	8	24.24242424	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.197860963	1.197860963	1	0	0.0025	0.9975	0	0	0	0	3	4.85E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216128527	4	187466204	C	G	MTNR1A	CCDS3848.1	r.?	-	-	intronic	34	0	0	51	13	25.49019608	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.259515571	1.259515571	1	0	0.00125	0.99875	0	0	0	0	3	4.87E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216131953	5	1132685	C	G	ENSG00000236454	ENST00000442245	r.?	-	-	intronic	35	0	0	35	6	17.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.675630252	0.675630252	1	0	0.0475	0.9525	0	0	0	0	3	2.24E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216131975	5	1244998	C	G	SLC6A18	CCDS3860.1	r.?	-	-	intronic	35	0	0	8	4	50	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.970588235	1.970588235	1	0	0.0075	0.9925	0	0	0	0	3	4.31E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216132046	5	1599760	T	G	-	-	-	-	-	-	23	0	0	106	16	15.09433962	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.594894562	0.594894562	1	0.0025	0.205	0.7925	0	0	0	0	3	3.68E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216132096	5	1991194	C	G	-	-	-	-	-	-	33	0	0	129	48	37.20930233	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.466484268	0.733242134	2	0	0.0075	0.9925	0	0	0	0	3	1.65E-75	1	1	1	NA	NA	NA
1353824	PD9772b	1216132418	5	3261457	C	G	-	-	-	-	-	-	33	0	0	82	38	46.34146341	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.826398852	0.913199426	2	0	0	1	0	0	0	0	3	1.00E-64	1	1	1	NA	NA	NA
1353824	PD9772b	1216132695	5	4299971	C	G	-	-	-	-	-	-	33	0	0	145	13	8.965517241	0	0	NA	0	0	NA							8	6	2	1	NA	NA	NA	unphased	0.801622718	0.801622718	1	0	0.0125	0.9875	0	0	0	0	3	7.64E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216132704	5	4371061	C	G	-	-	-	-	-	-	43	0	0	125	10	8	0	0	NA	0	0	NA							8	6	2	1	NA	NA	NA	unphased	0.715294118	0.715294118	1	0.00375	0.035	0.96125	0	0	0	0	3	1.03E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216132948	5	5395042	C	G	-	-	-	-	-	-	33	0	0	20	7	35	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.729411765	1.729411765	1	0	0	1	0	0	0	0	3	5.72E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216133379	5	8696997	A	G	-	-	-	-	-	-	30	0	0	77	17	22.07792208	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.090909091	1.090909091	1	0	0	1	0	0	0	0	3	2.82E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216133449	5	9218021	A	G	SEMA5A	CCDS3875.1	r.?	-	-	intronic	40	0	0	61	15	24.59016393	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.215043394	1.215043394	1	0	0	0.99875	0.00125	0	0	0	3	1.73E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216133504	5	9567340	A	G	-	-	-	-	-	-	41	0	0	59	18	30.50847458	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.507477567	0.753738784	2	0	0.01125	0.98875	0	0	0	0	3	2.03E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216133703	5	11595493	T	G	CTNND2	CCDS3881.1	r.?	-	-	intronic	38	0	0	74	17	22.97297297	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.905405405	0.905405405	1	0	0.00125	0.99875	0	0	0	0	3	1.34E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216133834	5	12706848	A	G	-	-	-	-	-	-	45	0	0	76	11	14.47368421	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.570433437	0.570433437	1	0.0025	0.17875	0.81875	0	0	0	0	3	2.08E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216134306	5	17676167	T	G	-	-	-	-	-	-	31	0	0	82	18	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0	1	0	0	0	0	3	1.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216134314	5	17727312	C	G	-	-	-	-	-	-	37	0	0	71	15	21.12676056	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.043910522	1.043910522	1	0	0.00125	0.99875	0	0	0	0	3	2.15E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216134545	5	19091319	A	G	-	-	-	-	-	-	40	0	0	79	20	25.3164557	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.250930752	1.250930752	1	0	0	1	0	0	0	0	3	1.91E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216134643	5	19781064	A	G	CDH18	CCDS3652.1	r.?	-	-	intronic	32	0	0	78	12	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.0175	0.9825	0	0	0	0	3	7.82E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216134668	5	19894468	A	G	CDH18	CCDS3652.1	r.?	-	-	intronic	35	0	0	71	13	18.30985915	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.904722452	0.904722452	1	0	0.00125	0.99875	0	0	0	0	3	5.42E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216134719	5	20507988	C	G	CDH18	CCDS3652.1	r.?	-	-	intronic	41	0	0	64	10	15.625	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.772058824	0.772058824	1	0	0.0125	0.9875	0	0	0	0	3	1.16E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216134767	5	20810019	A	G	-	-	-	-	-	-	39	0	0	73	19	26.02739726	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.286059629	1.286059629	1	0	0	1	0	0	0	0	3	2.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216135185	5	22526663	T	G	CDH12	CCDS3890.1	r.?	-	-	intronic	41	0	0	99	18	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.00125	0.99875	0	0	0	0	3	6.53E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216135204	5	22743481	A	G	CDH12	CCDS3890.1	r.?	-	-	intronic	39	0	0	84	21	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.15E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216135438	5	24552454	A	G	CDH10	CCDS3892.1	r.?	-	-	intronic	50	0	0	85	13	15.29411765	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.755709343	0.755709343	1	0	0.01125	0.98875	0	0	0	0	3	6.45E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216135914	5	28432859	A	G	-	-	-	-	-	-	31	0	0	56	8	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.0275	0.97125	0	0	0	0	3	4.48E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216136248	5	30312453	T	G	-	-	-	-	-	-	40	0	0	79	6	7.594936709	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.375279226	0.375279226	1	0.065	0.575	0.36	0	0	0	0	2	3.18E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216136348	5	30948471	C	G	-	-	-	-	-	-	40	0	0	29	4	13.79310345	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.681541582	0.681541582	1	0.00125	0.03875	0.96	0	0	0	0	3	1.34E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216136351	5	30983259	A	G	-	-	-	-	-	-	29	0	0	88	18	20.45454545	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.010695187	1.010695187	1	0	0	1	0	0	0	0	3	6.62E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216136786	5	34078308	C	G	-	-	-	-	-	-	39	0	0	54	10	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.0075	0.9925	0	0	0	0	3	1.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216137391	5	38102416	A	G	-	-	-	-	-	-	41	0	0	79	10	12.65822785	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	0.625465376	0.625465376	1	0.00125	0.0725	0.92625	0	0	0	0	3	1.03E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216137671	5	39942237	T	G	-	-	-	-	-	-	42	0	0	99	23	23.23232323	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.147950089	1.147950089	1	0	0	1	0	0	0	0	3	1.58E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216137891	5	41707857	T	G	-	-	-	-	-	-	37	0	0	74	16	21.62162162	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.852146264	0.852146264	1	0	0.00375	0.99625	0	0	0	0	3	7.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216138098	5	43744928	C	G	-	-	-	-	-	-	28	0	0	64	15	23.4375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.923713235	0.923713235	1	0	0.00125	0.99875	0	0	0	0	3	3.87E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216139491	5	50957938	A	G	-	-	-	-	-	-	41	0	0	70	18	25.71428571	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.013445378	1.013445378	1	0	0	1	0	0	0	0	3	6.91E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216139574	5	51641443	C	G	-	-	-	-	-	-	34	0	0	44	11	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	3.22E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216139865	5	54360757	T	G	-	-	-	-	-	-	35	0	0	66	12	18.18181818	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.71657754	0.71657754	1	0	0.025	0.975	0	0	0	0	3	9.36E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216140196	5	57963659	T	G	RAB3C	CCDS3976.1	r.?	-	-	intronic	39	0	0	77	18	23.37662338	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92131398	0.92131398	1	0	0	1	0	0	0	0	3	4.71E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216140584	5	62069689	C	G	-	-	-	-	-	-	37	0	0	61	15	24.59016393	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.969141755	0.969141755	1	0	0.00125	0.99875	0	0	0	0	3	1.73E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216140712	5	63440363	A	G	-	-	-	-	-	-	34	0	0	59	22	37.28813559	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.469591226	0.734795613	2	0	0.02125	0.97875	0	0	0	0	3	1.79E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216141331	5	69993107	A	G	-	-	-	-	-	-	22	0	0	11	3	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0.01	0.99	0	0	0	0	3	2.00E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216141377	5	70818506	T	G	BDP1	CCDS43328.1	r.?	-	-	intronic	31	0	0	63	6	9.523809524	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.37535014	0.37535014	1	0.11375	0.55625	0.33	0	0	0	0	2	8.32E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216141490	5	71867493	A	G	-	-	-	-	-	-	38	0	0	52	12	23.07692308	260	0	0	376	76	20.21276596							3	2	1	1	NA	NA	NA	unphased	0.909502262	0.909502262	1	0	0.0075	0.9925	0	0	0	0	3	4.19E-17	1	2.39E-95	1	YES	somatic	1_1
1353824	PD9772b	1216141536	5	72387155	C	G	FCHO2	CCDS47230.1	r.?	-	-	downstream	33	0	0	32	7	21.875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.862132353	0.862132353	1	0	0.01125	0.98875	0	0	0	0	3	2.36E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216141732	5	74392819	C	G	ANKRD31	CCDS47233.1	r.?	-	-	intronic	24	0	0	61	24	39.3442623	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.550626808	0.775313404	2	0	0.00875	0.99125	0	0	0	0	3	2.97E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216141748	5	74663787	C	G	COL4A3BP	CCDS47235.1	r.?	-	-	downstream	34	0	0	44	11	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	3.22E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216142706	5	83187529	T	G	-	-	-	-	-	-	34	0	0	61	22	36.06557377	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.421407907	0.710703954	2	0.00125	0.03125	0.9675	0	0	0	0	3	4.38E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216142731	5	83348745	A	G	EDIL3	CCDS4062.1	r.?	-	-	intronic	36	0	0	52	11	21.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.833710407	0.833710407	1	0	0.00625	0.99375	0	0	0	0	3	2.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216142757	5	83704071	C	G	-	-	-	-	-	-	43	0	0	54	10	18.51851852	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.729847495	0.729847495	1	0	0.03	0.97	0	0	0	0	3	1.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216143239	5	88589680	A	G	-	-	-	-	-	-	37	0	0	64	20	31.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.231617647	1.231617647	1	0	0	1	0	0	0	0	3	1.52E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216143246	5	88661098	A	G	-	-	-	-	-	-	41	0	0	65	14	21.53846154	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.848868778	0.848868778	1	0	0.00375	0.99625	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216143262	5	88831074	C	G	-	-	-	-	-	-	37	0	0	68	26	38.23529412	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.506920415	0.753460208	2	0	0.0075	0.9925	0	0	0	0	3	5.33E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1216143514	5	91230172	T	G	-	-	-	-	-	-	39	0	0	43	9	20.93023256	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.034199726	1.034199726	1	0	0.00375	0.99625	0	0	0	0	3	9.45E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216143613	5	92483345	T	G	-	-	-	-	-	-	39	0	0	66	16	24.24242424	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.95543672	0.95543672	1	0	0.00375	0.99625	0	0	0	0	3	1.03E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216144274	5	99174922	T	G	-	-	-	-	-	-	42	0	0	80	25	31.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.231617647	1.231617647	1	0	0	1	0	0	0	0	3	8.31E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1216144844	5	104413372	C	G	ENSG00000232402	ENST00000438939	r.?	-	-	intronic	41	0	0	73	15	20.54794521	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.809830782	0.809830782	1	0.00125	0.0125	0.98625	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216145040	5	106383958	C	G	-	-	-	-	-	-	34	0	0	51	13	25.49019608	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.00461361	1.00461361	1	0	0.00125	0.99875	0	0	0	0	3	4.87E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216145174	5	107638508	T	G	FBXL17	ENST00000359660	r.?	-	-	intronic	43	0	0	55	12	21.81818182	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.859893048	0.859893048	1	0	0.01125	0.98875	0	0	0	0	3	8.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216146048	5	116997816	T	G	-	-	-	-	-	-	37	0	0	60	15	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216146280	5	119444561	A	G	-	-	-	-	-	-	35	0	0	62	11	17.74193548	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.699240987	0.699240987	1	0	0.03125	0.96875	0	0	0	0	3	1.96E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216146300	5	119891498	T	G	PRR16	CCDS4127.1	r.?	-	-	intronic	33	0	0	41	11	26.82926829	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.057388809	1.057388809	1	0	0.0025	0.9975	0	0	0	0	3	1.34E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216146459	5	121710707	C	G	SNCAIP	CCDS4131.1	r.?	-	-	intronic	36	0	0	71	15	21.12676056	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.832642916	0.832642916	1	0	0.00625	0.99375	0	0	0	0	3	2.15E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216147267	5	129532261	A	G	-	-	-	-	-	-	26	0	0	62	13	20.96774194	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.826375712	0.826375712	1	0	0.00375	0.99625	0	0	0	0	3	8.08E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216147275	5	129631726	T	G	-	-	-	-	-	-	36	0	0	62	14	22.58064516	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.889943074	0.889943074	1	0	0	1	0	0	0	0	3	1.42E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216147317	5	130188193	A	G	-	-	-	-	-	-	25	0	0	67	21	31.34328358	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	4.96E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216147340	5	130471841	C	G	-	-	-	-	-	-	29	0	0	61	12	19.67213115	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.775313404	0.775313404	1	0	0.01125	0.98875	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216147796	5	136513816	C	G	SPOCK1	CCDS4191.1	r.?	-	-	intronic	37	0	0	60	12	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.01125	0.98875	0	0	0	0	3	2.74E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216148004	5	138894095	T	G	-	-	-	-	-	-	32	0	0	32	10	31.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.231617647	1.231617647	1	0	0	1	0	0	0	0	3	5.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216148490	5	144429510	A	G	-	-	-	-	-	-	35	0	0	63	13	20.63492063	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.813258637	0.813258637	1	0	0.0075	0.9925	0	0	0	0	3	1.01E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216148542	5	145043263	A	G	-	-	-	-	-	-	45	0	0	66	17	25.75757576	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.015151515	1.015151515	1	0	0	1	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216148771	5	147565425	T	G	-	-	-	-	-	-	42	0	0	72	19	26.38888889	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.04003268	1.04003268	1	0	0	1	0	0	0	0	3	1.75E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216148809	5	147940823	A	G	HTR4	CCDS34272.1	r.?	-	-	intronic	40	0	0	73	22	30.1369863	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.187751813	1.187751813	1	0	0	1	0	0	0	0	3	4.79E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216148901	5	148967935	C	G	ENSG00000183111	CCDS43385.1	r.?	-	-	intronic	45	0	0	25	3	12	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.472941176	0.472941176	1	0.0175	0.10125	0.88125	0	0	0	0	3	0.00026475	1	1	1	NA	NA	NA
1353824	PD9772b	1216148964	5	149957797	C	G	-	-	-	-	-	-	50	0	0	37	11	29.72972973	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.171701113	1.171701113	1	0	0.0025	0.9975	0	0	0	0	3	3.70E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216149094	5	151247607	C	G	GLRA1	CCDS4320.1	r.?	-	-	intronic	27	0	0	69	22	31.88405797	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.256606991	1.256606991	1	0	0	1	0	0	0	0	3	1.12E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216149107	5	151355828	C	G	-	-	-	-	-	-	34	0	0	52	11	21.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.833710407	0.833710407	1	0	0.0025	0.9975	0	0	0	0	3	2.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216149218	5	152255431	A	G	-	-	-	-	-	-	37	0	0	61	14	22.95081967	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.904532305	0.904532305	1	0	0.00375	0.99625	0	0	0	0	3	1.10E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216149345	5	153840545	A	G	SAP30L	CCDS47321.1	r.6034a>g	c.?	p.?	3'UTR variant	36	0	0	65	20	30.76923077	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.212669683	1.212669683	1	0	0	1	0	0	0	0	3	2.18E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216149365	5	154004027	A	G	-	-	-	-	-	-	31	0	0	24	6	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.01625	0.98375	0	0	0	0	3	1.95E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216149841	5	159082935	C	G	-	-	-	-	-	-	45	0	0	77	21	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0	1	0	0	0	0	3	1.46E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216149945	5	160189729	C	G	ATP10B	CCDS43394.1	r.?	-	-	intronic	35	0	0	72	13	18.05555556	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.711601307	0.711601307	1	0	0.0375	0.9625	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216150527	5	165950384	A	G	-	-	-	-	-	-	46	0	0	63	16	25.3968254	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.000933707	1.000933707	1	0	0.0025	0.9975	0	0	0	0	3	4.48E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216151300	5	174023433	C	G	-	-	-	-	-	-	31	0	0	53	12	22.64150943	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.892341842	0.892341842	1	0	0.0025	0.9975	0	0	0	0	3	5.39E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216151494	5	175753228	A	G	C5orf25	CCDS4398.2	r.?	-	-	intronic	30	0	0	55	12	21.81818182	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.859893048	0.859893048	1	0	0.00375	0.99625	0	0	0	0	3	8.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216151538	5	176148781	T	G	-	-	-	-	-	-	36	0	0	26	9	34.61538462	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.364253394	1.364253394	1	0	0.0025	0.9975	0	0	0	0	3	5.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216151627	5	177281627	A	G	-	-	-	-	-	-	66	0	0	112	16	14.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.56302521	0.56302521	1	0.00125	0.35125	0.6475	0	0	0	0	3	9.24E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216151682	5	177639965	C	G	AGXT2L2	CCDS4434.1	r.1538+9g>c	c.1303+9G>C	p.?	splice region	43	0	0	15	7	46.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.839215686	1.839215686	1	0	0.00125	0.9975	0	0	0	0.00125	3	4.85E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216151860	5	180203858	T	G	-	-	-	-	-	-	36	0	0	66	18	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0	1	0	0	0	0	3	2.08E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216152116	6	934155	A	G	-	-	-	-	-	-	36	0	0	47	11	23.40425532	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.156445557	1.156445557	1	0	0	1	0	0	0	0	3	7.21E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216152471	6	3668099	A	G	-	-	-	-	-	-	39	0	0	77	6	7.792207792	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.385026738	0.385026738	1	0.09	0.53	0.38	0	0	0	0	2	2.73E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216152828	6	6092827	T	G	-	-	-	-	-	-	30	0	0	77	32	41.55844156	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.053475936	1.026737968	2	0	0	1	0	0	0	0	3	8.63E-53	1	1	1	NA	NA	NA
1353824	PD9772b	1216153094	6	7755987	C	G	BMP6	CCDS4503.1	r.?	-	-	intronic	36	0	0	89	20	22.47191011	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.110376735	1.110376735	1	0	0.00125	0.99875	0	0	0	0	3	2.72E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216153969	6	13374137	A	G	GFOD1	CCDS4524.1	r.?	-	-	intronic	26	0	0	74	10	13.51351351	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.66772655	0.66772655	1	0.00125	0.04375	0.955	0	0	0	0	3	5.24E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216154132	6	14901501	A	G	-	-	-	-	-	-	30	0	0	35	10	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0.00375	0.99625	0	0	0	0	3	1.60E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216154201	6	15356396	C	G	JARID2	CCDS4533.1	r.?	-	-	intronic	29	0	0	50	18	36	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.418823529	1.418823529	1	0	0	1	0	0	0	0	3	5.92E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216154998	6	23565773	C	G	-	-	-	-	-	-	36	0	0	60	16	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.0025	0.9975	0	0	0	0	3	1.86E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216155064	6	24024532	A	G	-	-	-	-	-	-	28	0	0	57	19	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	1.01E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216155371	6	26591737	A	G	-	-	-	-	-	-	32	0	0	69	17	24.63768116	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.971014493	0.971014493	1	0	0.00125	0.99875	0	0	0	0	3	3.56E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216155573	6	28367815	T	G	ZSCAN12	ENST00000361028	r.?	-	-	upstream	48	0	0	19	8	42.10526316	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.659442724	1.659442724	1	0	0.00125	0.9975	0.00125	0	0	0	3	2.81E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216155592	6	28530472	A	G	-	-	-	-	-	-	41	0	0	79	22	27.84810127	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.097542815	1.097542815	1	0	0	1	0	0	0	0	3	3.56E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216155856	6	30194998	A	G	-	-	-	-	-	-	35	0	0	56	9	16.07142857	0	0	NA	0	0	NA							2.070786367	1	1	0.929213633	2	1	0.070786367	unphased	0.484065456	0.484065456	1	0.02375	0.43625	0.54	0	0	0	0	3	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216156379	6	32799574	A	G	TAP2	CCDS4755.1	r.?	-	-	intronic	27	0	0	76	9	11.84210526	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.585139319	0.585139319	1	0.0025	0.09375	0.90375	0	0	0	0	3	2.06E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216156541	6	34081722	C	G	GRM4	CCDS4787.1	r.?	-	-	intronic	45	0	0	20	3	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.03	0.97	0	0	0	0	3	0.0001337	1	1	1	NA	NA	NA
1353824	PD9772b	1216156605	6	34628435	C	G	C6orf106	CCDS4796.1	r.?	-	-	intronic	34	0	0	77	21	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	1.46E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216156653	6	34993968	A	G	ANKS1A	CCDS4798.1	r.?	-	-	intronic	31	0	0	49	7	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0	0.03	0.97	0	0	0	0	3	5.58E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216156765	6	35963768	T	G	SLC26A8	CCDS4813.1	r.?	-	-	intronic	48	0	0	95	19	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0	1	0	0	0	0	3	5.98E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216156886	6	36838231	A	G	PPIL1	CCDS4826.1	r.?	-	-	intronic	31	0	0	66	14	21.21212121	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.048128342	1.048128342	1	0	0	1	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216156894	6	36913235	A	G	-	-	-	-	-	-	31	0	0	84	23	27.38095238	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.352941176	1.352941176	1	0	0	1	0	0	0	0	3	2.25E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216157336	6	40621891	A	G	-	-	-	-	-	-	28	0	0	97	22	22.68041237	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.1206792	1.1206792	1	0	0	1	0	0	0	0	3	5.74E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216157594	6	43030392	A	G	KLC4	CCDS4883.1	r.?	-	-	intronic	38	0	0	15	3	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.0125	0.9875	0	0	0	0	3	5.44E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216157863	6	44943142	A	G	SUPT3H	CCDS34466.1	r.?	-	-	intronic	41	0	0	52	12	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	4.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216157957	6	45511497	A	G	RUNX2	CCDS43467.1	r.?	-	-	intronic	29	0	0	94	21	22.34042553	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.10387985	1.10387985	1	0	0.00125	0.99875	0	0	0	0	3	1.60E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216158277	6	47836953	C	G	-	-	-	-	-	-	34	0	0	67	13	19.40298507	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.958735733	0.958735733	1	0	0.0025	0.9975	0	0	0	0	3	2.41E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216158309	6	48242157	T	G	-	-	-	-	-	-	28	0	0	72	17	23.61111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.166666667	1.166666667	1	0	0	1	0	0	0	0	3	7.97E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216158699	6	51505088	C	G	PKHD1	CCDS4935.1	r.?	-	-	intronic	31	0	0	93	25	26.88172043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.328273245	1.328273245	1	0	0	1	0	0	0	0	3	6.46E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216158791	6	52331102	C	G	EFHC1	CCDS4942.1	r.?	-	-	intronic	31	0	0	84	22	26.19047619	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.294117647	1.294117647	1	0	0	1	0	0	0	0	3	1.66E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216158811	6	52474178	T	G	-	-	-	-	-	-	25	0	0	83	24	28.91566265	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.428773919	0.71438696	2	0	0.02625	0.97375	0	0	0	0	3	2.06E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216158886	6	53090510	A	G	-	-	-	-	-	-	39	0	0	73	12	16.43835616	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.812248187	0.812248187	1	0.00125	0.01	0.98875	0	0	0	0	3	3.39E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216159071	6	54567179	C	G	-	-	-	-	-	-	36	0	0	61	15	24.59016393	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.215043394	1.215043394	1	0	0	1	0	0	0	0	3	1.73E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216159131	6	54923157	T	G	-	-	-	-	-	-	30	0	0	62	15	24.19354839	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.19544592	1.19544592	1	0	0	1	0	0	0	0	3	2.28E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216159904	6	57573043	C	G	-	-	-	-	-	-	34	0	0	79	19	24.05063291	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.188384214	1.188384214	1	0	0	1	0	0	0	0	3	1.27E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216160426	6	61973416	A	G	-	-	-	-	-	-	43	0	0	71	10	14.08450704	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.695940348	0.695940348	1	0	0.03875	0.96125	0	0	0	0	3	3.42E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216160665	6	63893213	T	G	-	-	-	-	-	-	29	0	0	69	12	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.0075	0.9925	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216160840	6	65081363	C	G	EYS	CCDS47445.1	r.?	-	-	intronic	24	0	0	86	21	24.41860465	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.206566347	1.206566347	1	0	0	1	0	0	0	0	3	2.01E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216160954	6	65990464	A	G	EYS	CCDS47445.1	r.?	-	-	intronic	50	0	0	60	15	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216161078	6	66900521	A	G	-	-	-	-	-	-	32	0	0	74	11	14.86486486	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.734499205	0.734499205	1	0.00125	0.01875	0.98	0	0	0	0	3	1.53E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216161116	6	67193682	A	G	-	-	-	-	-	-	39	0	0	75	14	18.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0.00375	0.99625	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216161281	6	68319140	A	G	-	-	-	-	-	-	23	3	13.04347826	47	20	42.55319149	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.102628285	1.051314143	2	0	0	1	0	0	0	0	3	8.18E-34	0.000205387	1	1	NA	NA	NA
1353824	PD9772b	1216161379	6	68862091	C	G	-	-	-	-	-	-	29	0	0	44	6	13.63636364	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.673796791	0.673796791	1	0	0.0325	0.9675	0	0	0	0	3	9.37E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216161438	6	69302555	T	G	-	-	-	-	-	-	54	0	0	84	15	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.00125	0.99875	0	0	0	0	3	3.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216161530	6	69958555	C	G	BAI3	CCDS4968.1	r.?	-	-	intronic	59	0	0	82	19	23.17073171	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.144906743	1.144906743	1	0	0	1	0	0	0	0	3	2.79E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216161635	6	70716738	A	G	COL19A1	CCDS4970.1	r.?	-	-	intronic	34	0	0	73	16	21.91780822	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.082997583	1.082997583	1	0	0	1	0	0	0	0	3	6.15E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216161701	6	71153605	C	G	FAM135A	CCDS34481.1	r.?	-	-	intronic	34	0	0	74	11	14.86486486	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.734499205	0.734499205	1	0	0.01875	0.98125	0	0	0	0	3	1.53E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216161750	6	71480864	T	G	SMAP1	CCDS43478.1	r.?	-	-	intronic	30	0	0	15	4	26.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0	0.0075	0.9925	0	0	0	0	3	8.16E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216161947	6	73166724	A	G	-	-	-	-	-	-	42	0	0	81	18	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	1.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216161989	6	73501898	A	G	KCNQ5	CCDS4976.1	r.?	-	-	intronic	33	0	0	79	19	24.05063291	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.188384214	1.188384214	1	0	0.00125	0.99875	0	0	0	0	3	1.27E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216162108	6	74402490	C	G	CD109	CCDS4982.1	r.?	-	-	upstream	46	0	0	71	11	15.49295775	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.765534383	0.765534383	1	0	0.02	0.98	0	0	0	0	3	9.49E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216162293	6	75651622	T	G	-	-	-	-	-	-	41	0	0	93	17	18.27956989	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.903225806	0.903225806	1	0	0.00125	0.99875	0	0	0	0	3	9.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216162650	6	78606125	A	G	-	-	-	-	-	-	28	0	0	56	6	10.71428571	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.422268908	0.422268908	1	0.05625	0.4125	0.53125	0	0	0	0	3	4.09E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216162808	6	80123781	C	G	-	-	-	-	-	-	36	0	0	75	17	22.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.893333333	0.893333333	1	0	0	1	0	0	0	0	3	1.72E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216162821	6	80297041	C	G	-	-	-	-	-	-	25	0	0	73	19	26.02739726	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.025785657	1.025785657	1	0	0.00125	0.99875	0	0	0	0	3	2.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216162902	6	81291673	C	G	-	-	-	-	-	-	34	0	0	81	21	25.92592593	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.021786492	1.021786492	1	0	0	1	0	0	0	0	3	4.88E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216163000	6	82068184	C	G	-	-	-	-	-	-	34	0	0	51	9	17.64705882	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.69550173	0.69550173	1	0	0.0325	0.9675	0	0	0	0	3	4.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216163264	6	84522568	A	G	-	-	-	-	-	-	22	0	0	51	11	21.56862745	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.85005767	0.85005767	1	0	0.01375	0.98625	0	0	0	0	3	1.94E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216163591	6	88094655	A	G	-	-	-	-	-	-	43	0	0	57	11	19.29824561	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.760577915	0.760577915	1	0	0.02125	0.97875	0	0	0	0	3	7.29E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216163948	6	91737656	C	G	-	-	-	-	-	-	31	0	0	82	20	24.3902439	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.961262554	0.961262554	1	0	0	1	0	0	0	0	3	4.40E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216163974	6	91991174	T	G	-	-	-	-	-	-	36	0	0	57	7	12.28070175	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.484004128	0.484004128	1	0.02	0.27	0.71	0	0	0	0	3	1.66E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216164436	6	97077256	A	G	AL132776.1	ENST00000500007	r.?	-	-	intronic	39	0	0	66	17	25.75757576	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.015151515	1.015151515	1	0	0	1	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216164528	6	97910778	A	G	-	-	-	-	-	-	41	0	0	66	16	24.24242424	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.95543672	0.95543672	1	0	0	1	0	0	0	0	3	1.03E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216164655	6	99067821	C	G	-	-	-	-	-	-	29	0	0	71	14	19.71830986	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.777133389	0.777133389	1	0	0.0175	0.9825	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216164835	6	100965755	C	G	ASCC3	CCDS5046.1	r.?	-	-	intronic	50	0	0	72	23	31.94444444	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.258986928	1.258986928	1	0	0	1	0	0	0	0	3	3.67E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216164970	6	102139958	C	G	GRIK2	CCDS5049.1	r.?	-	-	intronic	29	0	0	43	12	27.90697674	76	0	0	27	8	29.62962963							3	2	1	1	NA	NA	NA	unphased	1.099863201	1.099863201	1	0	0	1	0	0	0	0	3	3.24E-18	1	7.97E-13	1	NA	NA	NA
1353824	PD9772b	1216165019	6	102678526	T	G	-	-	-	-	-	-	48	0	0	68	17	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216165078	6	103139259	A	G	-	-	-	-	-	-	42	0	0	57	9	15.78947368	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.622291022	0.622291022	1	0.0025	0.09125	0.90625	0	0	0	0	3	1.42E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216165139	6	103734624	C	G	-	-	-	-	-	-	37	0	0	78	20	25.64102564	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.010558069	1.010558069	1	0	0	1	0	0	0	0	3	1.43E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216165242	6	104764698	C	G	-	-	-	-	-	-	27	0	0	70	19	27.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.069747899	1.069747899	1	0	0	1	0	0	0	0	3	9.50E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216165267	6	104892871	A	G	-	-	-	-	-	-	39	0	0	34	7	20.58823529	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.811418685	0.811418685	1	0	0.00875	0.99125	0	0	0	0	3	3.73E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216165494	6	107305803	C	G	-	-	-	-	-	-	42	0	0	56	18	32.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.266806723	1.266806723	1	0	0	1	0	0	0	0	3	6.76E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216165571	6	107943314	T	G	SOBP	CCDS43488.1	r.?	-	-	intronic	39	0	0	63	19	30.15873016	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.188608777	1.188608777	1	0	0	1	0	0	0	0	3	9.48E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216165971	6	111960381	C	G	-	-	-	-	-	-	31	0	0	59	14	23.72881356	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.935194417	0.935194417	1	0	0.00125	0.99875	0	0	0	0	3	6.58E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216166037	6	112579387	C	G	LAMA4	CCDS34514.1	r.?	-	-	upstream	36	1	2.777777778	52	12	23.07692308	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.909502262	0.909502262	1	0	0.00125	0.99875	0	0	0	0	3	4.19E-17	0.165106833	1	1	NA	NA	NA
1353824	PD9772b	1216166058	6	112844714	C	G	-	-	-	-	-	-	44	0	0	53	10	18.86792453	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.743618202	0.743618202	1	0	0.0175	0.9825	0	0	0	0	3	1.57E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216166650	6	117846851	A	G	DCBLD1	CCDS34522.1	r.?	-	-	intronic	38	0	0	77	25	32.46753247	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.638621677	0.8650633	1.894221704	0	0.00375	0.99625	0	0	0	0	3	2.69E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1216166951	6	120129164	C	G	-	-	-	-	-	-	45	0	0	66	21	31.81818182	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.605849244	0.847762034	1.894221704	0	0	1	0	0	0	0	3	3.42E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216167550	6	124863840	A	G	NKAIN2	CCDS34526.1	r.?	-	-	intronic	37	0	0	78	31	39.74358974	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	2.005840997	1.002920499	2	0	0	1	0	0	0	0	3	1.97E-50	1	1	1	NA	NA	NA
1353824	PD9772b	1216167861	6	127472794	A	G	RSPO3	CCDS5135.1	r.?	-	-	intronic	25	0	0	90	35	38.88888889	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.962704631	0.981352316	2	0	0	1	0	0	0	0	3	2.52E-56	1	1	1	NA	NA	NA
1353824	PD9772b	1216167868	6	127493428	C	G	RSPO3	CCDS5135.1	r.?	-	-	intronic	41	0	0	74	13	17.56756757	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	0.886627189	0.886627189	1	0	0.0025	0.9975	0	0	0	0	3	9.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216167869	6	127501158	C	G	RSPO3	CCDS5135.1	r.?	-	-	intronic	36	0	0	94	30	31.91489362	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.610730245	0.850338818	1.894221704	0	0	1	0	0	0	0	3	2.21E-45	1	1	1	NA	NA	NA
1353824	PD9772b	1216168248	6	130777028	T	G	-	-	-	-	-	-	25	0	0	91	38	41.75824176	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	2.107519573	1.053759786	2	0	0	1	0	0	0	0	3	1.70E-62	1	1	1	NA	NA	NA
1353824	PD9772b	1216168302	6	131146877	T	G	-	-	-	-	-	-	40	0	0	64	25	39.0625	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.971466706	0.985733353	2	0	0	1	0	0	0	0	3	9.90E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1216168502	6	132702799	C	G	MOXD1	CCDS5152.2	r.?	-	-	intronic	34	0	0	79	35	44.30379747	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	2.235992618	1.117996309	2	0	0	1	0	0	0	0	3	7.65E-59	1	1	1	NA	NA	NA
1353824	PD9772b	1216168604	6	133477375	A	G	-	-	-	-	-	-	37	0	0	91	12	13.18681319	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	0.665532497	0.665532497	1	0	0.06375	0.93625	0	0	0	0	3	5.35E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216168872	6	135672655	C	G	AHI1	CCDS47483.1	r.?	-	-	intronic	38	0	0	67	18	26.86567164	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.355898296	1.355898296	1	0	0	1	0	0	0	0	3	2.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216168911	6	135988030	C	G	-	-	-	-	-	-	45	0	0	74	29	39.18918919	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.977860652	0.988930326	2	0	0	1	0	0	0	0	3	4.68E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1216169463	6	140065771	C	G	-	-	-	-	-	-	41	0	0	69	9	13.04347826	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	0.658298448	0.658298448	1	0	0.04625	0.95375	0	0	0	0	3	8.45E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216169637	6	141706660	T	G	-	-	-	-	-	-	31	0	0	70	31	44.28571429	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	2.229326103	1.114663051	2	0	0	1	0	0	0	0	3	2.75E-52	1	1	1	NA	NA	NA
1353824	PD9772b	1216169889	6	143857257	C	G	PHACTR2	ENST00000397980	r.?	-	-	upstream	32	0	0	56	10	17.85714286	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	0.898921816	0.898921816	1	0	0.01	0.99	0	0	0	0	3	2.82E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216169977	6	144456004	C	G	-	-	-	-	-	-	34	0	0	77	20	25.97402597	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.307522641	1.307522641	1	0	0	1	0	0	0	0	3	1.07E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216170095	6	145424376	C	G	-	-	-	-	-	-	37	0	0	81	18	22.22222222	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.118658259	1.118658259	1	0	0.00125	0.99875	0	0	0	0	3	1.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216170141	6	145776574	A	G	-	-	-	-	-	-	30	0	0	46	13	28.26086957	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.422641482	1.422641482	1	0	0	1	0	0	0	0	3	1.07E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216170305	6	146988628	A	G	C6orf103	CCDS47498.1	r.?	-	-	intronic	37	0	0	80	27	33.75	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.698962231	0.890808248	1.907214303	0	0	1	0	0	0	0	3	8.87E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1216170460	6	148351517	C	G	-	-	-	-	-	-	36	0	0	77	34	44.15584416	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	2.222788489	1.111394245	2	0	0	1	0	0	0	0	3	3.84E-57	1	1	1	NA	NA	NA
1353824	PD9772b	1216170520	6	148732542	C	G	SASH1	CCDS5212.1	r.?	-	-	intronic	33	0	0	41	7	17.07317073	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	0.859456955	0.859456955	1	0	0.015	0.985	0	0	0	0	3	1.51E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216170542	6	148926551	C	G	-	-	-	-	-	-	36	0	0	61	23	37.70491803	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.898051309	0.995195614	1.907214303	0	0	1	0	0	0	0	3	3.73E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216170762	6	150985910	C	G	PLEKHG1	CCDS34552.1	r.?	-	-	intronic	33	0	0	49	10	20.40816327	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	1.027339218	1.027339218	1	0	0.0025	0.9975	0	0	0	0	3	6.72E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216171286	6	154327960	T	G	OPRM1	CCDS47503.1	r.?	-	-	upstream	38	0	0	95	10	10.52631579	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.601321153	0.77954504	0.771374485	0.00125	0.0125	0.98625	0	0	0	0	3	6.70E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216171540	6	155639445	C	G	TFB1M	CCDS5248.1	r.?	-	-	upstream	41	0	0	88	15	17.04545455	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.973730276	0.973730276	1	0	0.005	0.995	0	0	0	0	3	6.87E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216171693	6	156676430	T	G	-	-	-	-	-	-	33	0	0	89	14	15.73033708	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.898603521	0.898603521	1	0	0.0025	0.9975	0	0	0	0	3	3.28E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216171707	6	156755006	C	G	-	-	-	-	-	-	28	0	0	102	16	15.68627451	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.896086424	0.896086424	1	0	0.0025	0.9975	0	0	0	0	3	1.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216172238	6	159999240	A	G	-	-	-	-	-	-	36	0	0	93	34	36.55913978	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	2.088459489	1.044229744	2	0	0	1	0	0	0	0	3	1.23E-53	1	1	1	NA	NA	NA
1353824	PD9772b	1216172409	6	160957558	C	G	LPA	CCDS43523.1	r.?	-	-	intronic	37	0	0	90	9	10	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.571255096	0.740567788	0.771374485	0	0.0275	0.9725	0	0	0	0	3	9.58E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216172440	6	161181173	A	G	-	-	-	-	-	-	37	0	0	86	21	24.41860465	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.394925233	1.394925233	1	0	0	1	0	0	0	0	3	2.01E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216172480	6	161427205	T	G	MAP3K4	CCDS34565.1	r.?	-	-	intronic	45	0	0	63	6	9.523809524	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.544052472	0.705302655	0.771374485	0.00125	0.03125	0.9675	0	0	0	0	3	8.32E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216172894	6	164104680	T	G	-	-	-	-	-	-	36	0	0	83	14	16.86746988	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.963562812	0.963562812	1	0	0.00375	0.99625	0	0	0	0	3	1.17E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216173477	6	169031319	C	G	SMOC2	CCDS5307.1	r.?	-	-	intronic	38	0	0	79	16	20.25316456	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.613326215	0.613326215	1	0.00125	0.17375	0.825	0	0	0	0	3	2.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216173613	6	170236261	T	G	-	-	-	-	-	-	37	0	0	82	20	24.3902439	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.738609314	0.738609314	1	0	0.01625	0.98375	0	0	0	0	3	4.40E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216173632	6	170436977	T	G	-	-	-	-	-	-	31	0	0	72	12	16.66666667	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.504716364	0.504716364	1	0.0175	0.56625	0.41625	0	0	0	0	2	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216174036	7	3068489	T	G	CARD11	CCDS5336.2	r.?	-	-	intronic	30	0	0	58	17	29.31034483	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.862068966	0.862068966	1	0	0.00625	0.99375	0	0	0	0	3	1.24E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216174095	7	3540987	A	G	SDK1	CCDS34590.1	r.?	-	-	intronic	43	0	0	84	25	29.76190476	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.87535014	0.87535014	1	0	0	1	0	0	0	0	3	3.46E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216174422	7	6385368	C	G	C7orf70	CCDS34599.1	r.?	-	-	intronic	40	0	0	69	18	26.08695652	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.767263427	0.767263427	1	0	0.0125	0.9875	0	0	0	0	3	5.16E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216174827	7	9819728	T	G	-	-	-	-	-	-	56	0	0	79	19	24.05063291	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.707371556	0.707371556	1	0	0.0275	0.9725	0	0	0	0	3	1.27E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216175330	7	13925378	A	G	-	-	-	-	-	-	35	0	0	68	19	27.94117647	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.101211073	1.101211073	1	0	0	1	0	0	0	0	3	5.06E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216175364	7	14412248	A	G	DGKB	CCDS47547.1	r.?	-	-	intronic	31	0	0	59	16	27.11864407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.068793619	1.068793619	1	0	0	1	0	0	0	0	3	1.37E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216175413	7	14996775	A	G	DGKB	ENST00000437998	r.?	-	-	intronic	35	0	0	46	9	19.56521739	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.771099744	0.771099744	1	0	0.0175	0.9825	0	0	0	0	3	1.82E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216175996	7	21835349	A	G	DNAH11	ENST00000424253	r.?	-	-	intronic	30	0	0	66	17	25.75757576	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.015151515	1.015151515	1	0	0.00125	0.99875	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216176196	7	23477273	C	G	IGF2BP3	CCDS5382.1	r.?	-	-	intronic	46	0	0	34	11	32.35294118	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.275086505	1.275086505	1	0	0.00375	0.99625	0	0	0	0	3	1.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216176617	7	27887807	C	G	JAZF1	CCDS5416.1	r.?	-	-	intronic	25	0	0	58	13	22.4137931	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.88336714	0.88336714	1	0	0.00625	0.99375	0	0	0	0	3	3.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216176959	7	31443520	A	G	-	-	-	-	-	-	30	0	0	56	17	30.35714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.196428571	1.196428571	1	0	0	1	0	0	0	0	3	6.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216176979	7	31613624	T	G	CCDC129	CCDS5435.2	r.?	-	-	intronic	30	0	0	49	4	8.163265306	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.321728691	0.321728691	1	0.1175	0.5325	0.35	0	0	0	0	2	0.000110643	1	1	1	NA	NA	NA
1353824	PD9772b	1216177152	7	33067935	A	G	NT5C3	CCDS34617.1	r.?	-	-	intronic	44	0	0	66	19	28.78787879	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.134581105	1.134581105	1	0	0	1	0	0	0	0	3	2.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216177179	7	33379736	A	G	BBS9	CCDS43566.1	r.?	-	-	intronic	28	0	0	70	19	27.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.069747899	1.069747899	1	0	0	1	0	0	0	0	3	9.50E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216177223	7	33828567	C	G	-	-	-	-	-	-	39	0	0	50	10	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.01375	0.98625	0	0	0	0	3	8.36E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216177471	7	36267720	A	G	EEPD1	CCDS34619.1	r.?	-	-	intronic	42	0	0	29	9	31.03448276	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.223123732	1.223123732	1	0	0.0025	0.9975	0	0	0	0	3	1.79E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216177524	7	36649870	A	G	AOAH	CCDS5448.1	r.?	-	-	intronic	33	0	0	70	23	32.85714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.294957983	1.294957983	1	0	0	1	0	0	0	0	3	1.70E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216177939	7	41208318	C	G	-	-	-	-	-	-	45	0	0	74	15	20.27027027	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.798887122	0.798887122	1	0	0.01125	0.98875	0	0	0	0	3	4.22E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216177958	7	41417804	C	G	ENSG00000236089	ENST00000443116	r.?	-	-	intronic	28	0	0	57	12	21.05263158	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.829721362	0.829721362	1	0	0.0125	0.9875	0	0	0	0	3	1.40E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216178286	7	44956260	C	G	-	-	-	-	-	-	22	0	0	11	3	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0.01875	0.98125	0	0	0	0	3	2.00E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216178422	7	46554942	C	G	-	-	-	-	-	-	28	0	0	75	19	25.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.998431373	0.998431373	1	0	0	1	0	0	0	0	3	4.19E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216178526	7	48115654	A	G	-	-	-	-	-	-	39	0	0	59	9	15.25423729	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.601196411	0.601196411	1	0.00375	0.11	0.88625	0	0	0	0	3	1.96E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216178629	7	49396245	T	G	-	-	-	-	-	-	34	0	0	65	16	24.61538462	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.970135747	0.970135747	1	0	0	1	0	0	0	0	3	7.85E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216179216	7	53275324	C	G	-	-	-	-	-	-	24	0	0	51	8	15.68627451	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.61822376	0.61822376	1	0.00875	0.085	0.90625	0	0	0	0	3	2.05E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216179336	7	54406068	A	G	-	-	-	-	-	-	28	0	0	59	20	33.89830508	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.335992024	1.335992024	1	0	0	1	0	0	0	0	3	2.21E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216185207	7	63256704	T	G	-	-	-	-	-	-	31	0	0	37	8	21.62162162	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	1.046030777	1.046030777	1	0	0.01125	0.98875	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216185307	7	63747067	C	G	-	-	-	-	-	-	32	0	0	85	16	18.82352941	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	0.910662088	1.015552546	0.896715873	0	0	1	0	0	0	0	3	8.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216186154	7	66178232	C	G	KCTD7	ENST00000451741	r.?	-	-	intronic	24	0	0	25	6	24	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	1.161094163	1.161094163	1	0	0.00875	0.99125	0	0	0	0	3	2.55E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216186300	7	67083386	T	G	-	-	-	-	-	-	44	0	0	68	11	16.17647059	139	0	0	188	32	17.0212766							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	0.782600232	0.872740469	0.896715873	0	0.01	0.99	0	0	0	0	3	5.76E-14	1	1.50E-38	1	YES	somatic	1_1
1353824	PD9772b	1216186808	7	69823010	A	G	AUTS2	CCDS5539.1	r.?	-	-	intronic	36	0	0	75	16	21.33333333	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	1.0320837	1.0320837	1	0	0	1	0	0	0	0	3	9.88E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216186966	7	70913852	C	G	WBSCR17	CCDS5540.1	r.?	-	-	intronic	45	0	0	41	11	26.82926829	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.325681492	1.325681492	1	0	0.0025	0.9975	0	0	0	0	3	1.34E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216187852	7	76824741	T	G	FGL2	CCDS5591.1	r.2208a>c	c.?	p.?	3'UTR variant	38	0	0	81	18	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	1.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216187867	7	76883909	A	G	CCDC146	CCDS34671.1	r.?	-	-	intronic	30	0	0	71	15	21.12676056	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.043910522	1.043910522	1	0	0	1	0	0	0	0	3	2.15E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216188255	7	79768353	C	G	GNAI1	CCDS5595.1	r.?	-	-	intronic	40	0	0	72	17	23.61111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.166666667	1.166666667	1	0	0	1	0	0	0	0	3	7.97E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216188268	7	79857140	C	G	-	-	-	-	-	-	27	0	0	66	18	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	2.08E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216188390	7	81152450	A	G	-	-	-	-	-	-	28	0	0	86	15	17.44186047	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.861833105	0.861833105	1	0	0.0025	0.9975	0	0	0	0	3	4.76E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216188440	7	81677245	C	G	CACNA2D1	CCDS5598.1	r.?	-	-	intronic	31	0	0	84	14	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01125	0.98875	0	0	0	0	3	1.40E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216188540	7	82504712	A	G	PCLO	CCDS47630.1	r.?	-	-	intronic	38	0	0	70	10	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0	0.03375	0.96625	0	0	0	0	3	2.95E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216188598	7	82876869	A	G	-	-	-	-	-	-	40	0	0	89	17	19.1011236	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.943820225	0.943820225	1	0	0.00125	0.99875	0	0	0	0	3	4.11E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216188791	7	84044554	A	G	SEMA3A	ENST00000424555	r.?	-	-	intronic	42	0	0	81	7	8.641975309	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.427015251	0.427015251	1	0.0325	0.48625	0.48125	0	0	0	0	2	1.97E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216188818	7	84246060	C	G	-	-	-	-	-	-	24	0	0	41	7	17.07317073	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.843615495	0.843615495	1	0.00125	0.01375	0.985	0	0	0	0	3	1.51E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216188879	7	84705354	C	G	SEMA3D	CCDS34676.1	r.?	-	-	intronic	34	0	0	66	14	21.21212121	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.048128342	1.048128342	1	0	0	1	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216189702	7	91071482	C	G	-	-	-	-	-	-	23	0	0	79	10	12.65822785	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.625465376	0.625465376	1	0.00125	0.07375	0.925	0	0	0	0	3	1.03E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216189847	7	92358850	C	G	CDK6	CCDS5628.1	r.?	-	-	intronic	30	0	0	83	22	26.5060241	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.309709426	1.309709426	1	0	0	1	0	0	0	0	3	1.23E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216189987	7	93751488	A	G	-	-	-	-	-	-	38	0	0	61	12	19.67213115	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.775313404	0.775313404	1	0	0.01875	0.98125	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216190078	7	94816145	A	G	PPP1R9A	CCDS34683.1	r.?	-	-	intronic	37	0	0	64	14	21.875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.862132353	0.862132353	1	0	0.0075	0.9925	0	0	0	0	3	2.31E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216190607	7	100247046	A	G	ACTL6B	CCDS5702.1	r.?	-	-	intronic	41	0	0	16	3	18.75	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.02	0.98	0	0	0	0	3	6.67E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216190749	7	101246590	A	G	-	-	-	-	-	-	42	0	0	30	14	46.66666667	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.305882353	1.152941176	2	0	0.00125	0.99875	0	0	0	0	3	8.24E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216191028	7	103225240	A	G	RELN	CCDS47680.1	r.?	-	-	intronic	41	0	0	72	34	47.22222222	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.333333333	1.166666667	2	0	0	1	0	0	0	0	3	1.92E-58	1	1	1	NA	NA	NA
1353824	PD9772b	1216191422	7	105745284	T	G	SYPL1	CCDS47685.1	r.?	-	-	intronic	32	1	3.125	76	38	50	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.470588235	0.823529412	3	0	0	1	0	0	0	0	3	2.08E-66	0.14819814	1	1	NA	NA	NA
1353824	PD9772b	1216191522	7	106404498	C	G	-	-	-	-	-	-	31	0	0	70	28	40	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.976470588	0.988235294	2	0	0.00125	0.99875	0	0	0	0	3	8.50E-46	1	1	1	NA	NA	NA
1353824	PD9772b	1216191569	7	106790202	T	G	PRKAR2B	CCDS5740.1	r.?	-	-	intronic	26	0	0	70	11	15.71428571	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.776470588	0.776470588	1	0	0.01375	0.98625	0	0	0	0	3	8.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216191617	7	107183744	A	G	COG5	CCDS5743.1	r.?	-	-	intronic	28	0	0	29	9	31.03448276	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.53346856	1.53346856	1	0	0.00125	0.99875	0	0	0	0	3	1.79E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216191659	7	107460146	A	G	-	-	-	-	-	-	24	0	0	83	30	36.14457831	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.785967399	0.8929837	2	0	0	1	0	0	0	0	3	2.51E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1216191760	7	108058177	T	G	NRCAM	CCDS47686.1	r.?	-	-	intronic	28	0	0	83	9	10.84337349	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.53579022	0.53579022	1	0.0075	0.225	0.7675	0	0	0	0	3	4.60E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216191794	7	108318975	A	G	-	-	-	-	-	-	34	0	0	63	26	41.26984127	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.039215686	1.019607843	2	0	0.00125	0.99875	0	0	0	0	3	4.45E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1216191815	7	108516897	C	G	-	-	-	-	-	-	31	0	0	51	25	49.01960784	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.422145329	0.807381776	3	0	0.00125	0.99875	0	0	0	0	3	6.52E-44	1	1	1	NA	NA	NA
1353824	PD9772b	1216191986	7	109574199	C	G	-	-	-	-	-	-	57	0	0	79	28	35.44303797	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.751303053	0.875651526	2	0	0	1	0	0	0	0	3	5.51E-44	1	1	1	NA	NA	NA
1353824	PD9772b	1216192119	7	110772316	A	G	IMMP2L	CCDS5753.1	r.?	-	-	intronic	37	0	0	84	34	40.47619048	0	0	NA	1	0	0							4	3	1	1	NA	NA	NA	unphased	2	1	2	0	0	1	0	0	0	0	3	1.68E-55	1	1	1	NA	NA	NA
1353824	PD9772b	1216192737	7	115729398	T	G	TFEC	ENST00000484212	r.?	-	-	intronic	24	0	0	83	32	38.55421687	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.905031892	0.952515946	2	0	0	1	0	0	0	0	3	1.76E-51	1	1	1	NA	NA	NA
1353824	PD9772b	1216192797	7	116079061	T	G	-	-	-	-	-	-	39	0	0	77	31	40.25974026	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.989304813	0.994652406	2	0	0	1	0	0	0	0	3	1.20E-50	1	1	1	NA	NA	NA
1353824	PD9772b	1216193441	7	121053028	A	G	-	-	-	-	-	-	43	0	0	76	34	44.73684211	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.210526316	1.105263158	2	0	0	1	0	0	0	0	3	2.16E-57	1	1	1	NA	NA	NA
1353824	PD9772b	1216194646	7	129531772	T	G	UBE2H	CCDS5814.1	r.?	-	-	intronic	38	0	0	32	12	37.5	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.852941176	0.926470588	2	0	0.005	0.995	0	0	0	0	3	5.03E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216194664	7	129619593	C	G	-	-	-	-	-	-	26	0	0	36	14	38.88888889	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.921568627	0.960784314	2	0	0	1	0	0	0	0	3	2.09E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216194673	7	129666325	C	G	ZC3HC1	CCDS34753.1	r.?	-	-	intronic	29	0	0	57	18	31.57894737	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.560371517	0.780185759	2	0	0.00625	0.99375	0	0	0	0	3	9.84E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216195299	7	134422012	A	G	-	-	-	-	-	-	39	0	0	64	22	34.375	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.698529412	0.849264706	2	0	0.0025	0.9975	0	0	0	0	3	1.57E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216195627	7	136730054	C	G	-	-	-	-	-	-	37	0	0	73	36	49.31506849	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.436744561	0.812248187	3	0	0	1	0	0	0	0	3	1.06E-62	1	1	1	NA	NA	NA
1353824	PD9772b	1216195739	7	137387075	C	G	DGKI	CCDS5845.1	r.?	-	-	intronic	28	0	0	86	42	48.8372093	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.413132695	0.804377565	3	0	0.0025	0.9975	0	0	0	0	3	1.19E-72	1	1	1	NA	NA	NA
1353824	PD9772b	1216196577	7	142193501	A	G	-	-	-	-	-	-	27	0	0	55	20	36.36363636	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.160427807	1.080213904	2	0	0.00125	0.99875	0	0	0	0	3	4.08E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216196609	7	142427555	C	G	-	-	-	-	-	-	36	0	0	91	41	45.05494505	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.676793794	0.892264598	3	0	0	1	0	0	0	0	3	4.73E-69	1	1	1	NA	NA	NA
1353824	PD9772b	1216196840	7	143592205	A	G	FAM115A	CCDS5886.1	r.?	-	-	intronic	34	0	0	114	40	35.0877193	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.084623323	1.042311662	2	0	0	1	0	0	0	0	3	5.97E-62	1	1	1	NA	NA	NA
1353824	PD9772b	1216196950	7	144274681	C	G	TPK1	CCDS5888.1	r.?	-	-	intronic	35	0	0	91	13	14.28571429	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.848739496	0.848739496	1	0	0.00875	0.99125	0	0	0	0	3	1.63E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216197056	7	144944126	C	G	-	-	-	-	-	-	41	0	0	98	20	20.40816327	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.212484994	1.212484994	1	0	0	1	0	0	0	0	3	2.25E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216197324	7	146688475	A	G	CNTNAP2	CCDS5889.1	r.?	-	-	intronic	22	0	0	79	17	21.51898734	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.278481013	1.278481013	1	0	0.00125	0.99875	0	0	0	0	3	4.55E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216197423	7	147318680	A	G	CNTNAP2	CCDS5889.1	r.?	-	-	intronic	38	0	0	102	9	8.823529412	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.524221453	0.524221453	1	0.01375	0.2325	0.75375	0	0	0	0	3	2.94E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216197553	7	147917261	C	G	CNTNAP2	CCDS5889.1	r.?	-	-	intronic	42	0	0	21	4	19.04761905	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.131652661	1.131652661	1	0	0.015	0.985	0	0	0	0	3	3.49E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216197953	7	150355521	C	G	-	-	-	-	-	-	26	0	0	64	16	25	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.735294118	0.735294118	1	0	0.015	0.985	0	0	0	0	3	5.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216197957	7	150422576	C	G	GIMAP1	CCDS5906.1	r.?	-	-	downstream	37	0	0	43	10	23.25581395	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.683994528	0.683994528	1	0.0025	0.03625	0.96125	0	0	0	0	3	1.61E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216197979	7	150614575	A	G	-	-	-	-	-	-	46	0	0	67	10	14.92537313	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.438981563	0.438981563	1	0.045	0.745	0.21	0	0	0	0	2	1.87E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216198015	7	151308083	C	G	PRKAG2	CCDS43683.1	r.?	-	-	intronic	37	0	0	34	4	11.76470588	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.346020761	0.346020761	1	0.0975	0.48375	0.41875	0	0	0	0	2	2.57E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216198580	7	152256433	T	G	-	-	-	-	-	-	30	0	0	61	12	19.67213115	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.578592093	0.578592093	1	0.00125	0.23	0.76875	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216199026	7	155981363	C	G	-	-	-	-	-	-	41	0	0	55	15	27.27272727	0	0	NA	0	0	NA							1.393758832	1	0	0.606241168	1	1	0.393758832	unphased	0.636800537	0.636800537	1	0	0.11875	0.88125	0	0	0	0	3	3.01E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216199133	7	157013009	T	G	UBE3C	CCDS34789.1	r.?	-	-	intronic	36	0	0	41	10	24.3902439	0	0	NA	0	0	NA							1.393758832	1	0	0.606241168	1	1	0.393758832	unphased	0.569496415	0.569496415	1	0.00625	0.25125	0.7425	0	0	0	0	3	9.51E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216199820	8	3477693	T	G	CSMD1	ENST00000318252	r.?	-	-	intronic	45	0	0	52	17	32.69230769	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.288461538	1.288461538	1	0	0	1	0	0	0	0	3	1.42E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216200401	8	7924832	C	G	-	-	-	-	-	-	12	0	0	23	3	13.04347826	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.644501279	0.644501279	1	0.0025	0.0375	0.96	0	0	0	0	3	0.000205387	1	1	1	NA	NA	NA
1353824	PD9772b	1216200493	8	8349437	C	G	-	-	-	-	-	-	33	0	0	48	8	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.0175	0.9825	0	0	0	0	3	1.23E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216200602	8	9184566	T	G	-	-	-	-	-	-	28	0	0	46	14	30.43478261	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.199488491	1.199488491	1	0	0	1	0	0	0	0	3	1.26E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216201172	8	12785580	T	G	-	-	-	-	-	-	31	0	0	45	13	28.88888889	2	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.138562092	1.138562092	1	0	0.00125	0.99875	0	0	0	0	3	7.68E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216201378	8	14490418	A	G	SGCZ	CCDS5992.2	r.?	-	-	intronic	39	0	0	57	18	31.57894737	77	0	0	178	27	15.16853933							3	2	1	1	NA	NA	NA	unphased	1.244582043	1.244582043	1	0	0	1	0	0	0	0	3	9.84E-28	1	2.38E-31	1	YES	somatic	1_1
1353824	PD9772b	1216202348	8	23985167	A	G	-	-	-	-	-	-	30	0	0	80	22	27.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.083823529	1.083823529	1	0	0	1	0	0	0	0	3	4.89E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216203339	8	34253493	C	G	-	-	-	-	-	-	44	0	0	76	22	28.94736842	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.140866873	1.140866873	1	0	0	1	0	0	0	0	3	1.34E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216203630	8	37819792	C	G	ADRB3	CCDS6099.1	r.?	-	-	downstream	38	0	0	46	12	26.08695652	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.028132992	1.028132992	1	0	0.0025	0.9975	0	0	0	0	3	8.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216203673	8	38286934	C	G	FGFR1	CCDS6107.2	r.?	-	-	intronic	32	0	0	12	4	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.01	0.99	0	0	0	0	3	3.00E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216203677	8	38371892	C	G	C8orf86	CCDS6108.1	r.?	-	-	intronic	29	0	0	19	7	36.84210526	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.452012384	1.452012384	1	0	0.00125	0.99875	0	0	0	0	3	3.73E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216203805	8	39539022	A	G	ADAM18	CCDS6113.1	r.?	-	-	intronic	43	0	0	69	19	27.53623188	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.085251492	1.085251492	1	0	0	1	0	0	0	0	3	6.95E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216204107	8	42160291	A	G	IKBKB	CCDS6128.1	r.?	-	-	intronic	26	0	0	63	12	19.04761905	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.0025	0.9975	0	0	0	0	3	5.15E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216204282	8	43142485	A	G	-	-	-	-	-	-	43	0	0	95	24	25.26315789	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.248297214	1.248297214	1	0	0	1	0	0	0	0	3	8.29E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216204966	8	47783719	C	G	-	-	-	-	-	-	33	0	0	91	21	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	7.54E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216205605	8	53171678	C	G	ST18	CCDS6149.1	r.?	-	-	intronic	40	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0.00125	0.99875	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216205783	8	54652904	C	G	ATP6V1H	CCDS6153.1	r.?	-	-	intronic	37	0	0	78	11	14.1025641	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.83785822	0.83785822	1	0	0.0075	0.9925	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216205829	8	55042302	C	G	-	-	-	-	-	-	17	0	0	49	8	16.32653061	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.969987995	0.969987995	1	0	0.01375	0.98625	0	0	0	0	3	1.47E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216205859	8	55262759	C	G	-	-	-	-	-	-	38	0	0	61	13	21.31147541	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.266152363	1.266152363	1	0	0	1	0	0	0	0	3	6.41E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216206059	8	56571271	A	G	-	-	-	-	-	-	28	0	0	102	28	27.45098039	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.630911188	0.815455594	2	0	0.00375	0.99625	0	0	0	0	3	2.48E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216206215	8	57595763	C	G	-	-	-	-	-	-	33	0	0	93	20	21.50537634	0	0	NA	2	0	0							5	3	2	1	NA	NA	NA	unphased	1.277672359	1.277672359	1	0	0	1	0	0	0	0	3	7.16E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216206280	8	58002819	C	G	-	-	-	-	-	-	35	0	0	92	10	10.86956522	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.645780051	0.645780051	1	0	0.05375	0.94625	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216206366	8	58534173	T	G	-	-	-	-	-	-	38	0	0	98	25	25.51020408	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.515606242	0.757803121	2	0	0.01625	0.98375	0	0	0	0	3	2.85E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216206504	8	59654119	C	G	-	-	-	-	-	-	39	0	0	83	14	16.86746988	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.833451453	0.833451453	1	0	0.0025	0.9975	0	0	0	0	3	1.17E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216207022	8	63053479	C	G	ENSG00000237810	ENST00000433538	r.?	-	-	downstream	25	0	0	105	19	18.0952381	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.075070028	1.075070028	1	0	0.00125	0.99875	0	0	0	0	3	4.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216207159	8	63887848	C	G	ENSG00000213006	ENST00000391688	r.?	-	-	upstream	32	0	0	106	21	19.81132075	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.177025527	1.177025527	1	0	0.00125	0.99875	0	0	0	0	3	2.53E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216207335	8	65235252	A	G	-	-	-	-	-	-	35	0	0	61	7	11.47540984	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.681774349	0.681774349	1	0	0.0425	0.9575	0	0	0	0	3	2.69E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216207792	8	68705333	C	G	-	-	-	-	-	-	42	0	0	81	11	13.58024691	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.806826434	0.806826434	1	0	0.01	0.99	0	0	0	0	3	4.29E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216208163	8	71052697	T	G	NCOA2	CCDS47872.1	r.?	-	-	intronic	27	0	0	64	9	14.0625	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.835477941	0.835477941	1	0	0.01625	0.98375	0	0	0	0	3	4.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216208205	8	71333428	A	G	-	-	-	-	-	-	36	0	0	65	10	15.38461538	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.914027149	0.914027149	1	0	0.0075	0.9925	0	0	0	0	3	1.36E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216208498	8	73581374	C	G	KCNB2	CCDS6209.1	r.?	-	-	intronic	49	0	0	79	16	20.25316456	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.000744602	1.000744602	1	0	0	1	0	0	0	0	3	2.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216208748	8	75644388	C	G	-	-	-	-	-	-	39	0	0	76	11	14.47368421	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.715170279	0.715170279	1	0	0.0325	0.9675	0	0	0	0	3	2.08E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216208964	8	77355423	A	G	-	-	-	-	-	-	40	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0	1	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216209007	8	77692950	T	G	ZFHX4	CCDS47878.1	r.?	-	-	intronic	33	0	0	86	17	19.76744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976744186	0.976744186	1	0	0.00125	0.99875	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216209032	8	77898381	C	G	PEX2	CCDS6221.1	r.?	-	-	intronic	22	0	0	68	9	13.23529412	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.653979239	0.653979239	1	0	0.05	0.95	0	0	0	0	3	7.38E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216209076	8	78192652	A	G	-	-	-	-	-	-	29	0	0	75	14	18.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0.005	0.995	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216209218	8	79146139	A	G	-	-	-	-	-	-	30	0	0	90	24	26.66666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.584313725	0.792156863	2	0	0.00125	0.99875	0	0	0	0	3	1.91E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216209257	8	79579546	T	G	FAM164A	CCDS6223.1	r.?	-	-	intronic	37	0	0	116	22	18.96551724	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.126774848	1.126774848	1	0	0	1	0	0	0	0	3	4.22E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216209417	8	80764251	C	G	AC016240.1	ENST00000502766	r.?	-	-	intronic	27	0	0	64	14	21.875	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.299632353	1.299632353	1	0	0	1	0	0	0	0	3	2.31E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216209692	8	82507883	T	G	-	-	-	-	-	-	43	0	0	52	7	13.46153846	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.799773756	0.799773756	1	0.00125	0.00625	0.9925	0	0	0	0	3	8.58E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216209881	8	83677165	C	G	-	-	-	-	-	-	29	1	3.448275862	76	23	30.26315789	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.797987616	0.898993808	2	0	0.0025	0.9975	0	0	0	0	3	1.58E-34	0.135292269	1	1	NA	NA	NA
1353824	PD9772b	1216209956	8	84127014	T	G	-	-	-	-	-	-	37	0	0	98	17	17.34693878	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.030612245	1.030612245	1	0	0	1	0	0	0	0	3	2.38E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216210530	8	87264165	C	G	-	-	-	-	-	-	37	0	0	94	12	12.76595745	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.75844806	0.75844806	1	0.00125	0.02125	0.9775	0	0	0	0	3	7.98E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216210724	8	88476835	C	G	-	-	-	-	-	-	33	0	0	46	7	15.2173913	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.904092072	0.904092072	1	0	0.01125	0.98875	0	0	0	0	3	3.53E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216210857	8	89423290	A	G	-	-	-	-	-	-	36	0	0	106	18	16.98113208	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.008879023	1.008879023	1	0	0	1	0	0	0	0	3	2.43E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216210865	8	89480501	A	G	-	-	-	-	-	-	39	0	0	82	14	17.07317073	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.014347202	1.014347202	1	0	0.0025	0.9975	0	0	0	0	3	9.77E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216210921	8	89898371	A	G	-	-	-	-	-	-	35	0	0	86	15	17.44186047	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.03625171	1.03625171	1	0	0.00125	0.99875	0	0	0	0	3	4.76E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216210935	8	90046238	C	G	-	-	-	-	-	-	37	0	0	92	38	41.30434783	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.453964194	0.817988065	3	0	0.00125	0.99875	0	0	0	0	3	2.88E-62	1	1	1	NA	NA	NA
1353824	PD9772b	1216211039	8	90712089	C	G	-	-	-	-	-	-	17	0	0	40	4	10	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.594117647	0.594117647	1	0.00625	0.06	0.93375	0	0	0	0	3	4.95E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216211410	8	93535436	C	G	-	-	-	-	-	-	32	0	0	90	13	14.44444444	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.858169935	0.858169935	1	0	0.00625	0.99375	0	0	0	0	3	1.40E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216211452	8	93737878	T	G	-	-	-	-	-	-	29	0	0	83	12	14.45783133	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.858965273	0.858965273	1	0	0	1	0	0	0	0	3	1.70E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216211554	8	94493728	A	G	AC011118.2	ENST00000501400	r.?	-	-	intronic	36	0	0	100	18	18	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.069411765	1.069411765	1	0	0	1	0	0	0	0	3	7.93E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216211774	8	95763781	A	G	DPY19L4	CCDS34924.1	r.?	-	-	intronic	37	0	0	21	4	19.04761905	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.131652661	1.131652661	1	0	0.01625	0.98375	0	0	0	0	3	3.49E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216211906	8	96599584	C	G	-	-	-	-	-	-	47	0	0	58	7	12.06896552	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.71703854	0.71703854	1	0	0.0275	0.9725	0	0	0	0	3	1.88E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216212093	8	97685073	T	G	ENSG00000104324	CCDS6273.1	r.?	-	-	intronic	34	0	0	86	11	12.79069767	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.759917921	0.759917921	1	0	0.015	0.985	0	0	0	0	3	8.47E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216212459	8	100109051	A	G	VPS13B	CCDS6280.1	r.?	-	-	intronic	29	0	0	82	22	26.82926829	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.593974175	0.796987088	2	0	0.0025	0.9975	0	0	0	0	3	9.09E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216212589	8	100987741	A	G	RGS22	CCDS43758.1	r.?	-	-	intronic	39	0	0	94	13	13.82978723	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.010441044	1.010441044	1	0	0.00375	0.99625	0	0	0	0	3	2.52E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216212742	8	101889193	A	G	-	-	-	-	-	-	35	0	0	110	18	16.36363636	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.195570802	1.195570802	1	0	0	1	0	0	0	0	3	4.92E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216212846	8	102355231	C	G	-	-	-	-	-	-	29	0	0	97	31	31.95876289	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	2.334992231	0.987274346	2.365089541	0	0	1	0	0	0	0	3	7.26E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1216212955	8	102864867	C	G	NCALD	CCDS6292.1	r.?	-	-	intronic	27	0	0	108	23	21.2962963	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.555964058	1.139825639	1.365089541	0	0	1	0	0	0	0	3	1.44E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216213447	8	105663927	C	G	-	-	-	-	-	-	36	0	0	88	8	9.090909091	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.664206001	0.664206001	1	0.00125	0.04625	0.9525	0	0	0	0	3	1.76E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216213673	8	106899682	A	G	-	-	-	-	-	-	39	0	0	121	15	12.39669421	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.905735456	0.905735456	1	0	0.00375	0.99625	0	0	0	0	3	1.00E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216213776	8	107710793	A	G	OXR1	CCDS47909.1	r.?	-	-	intronic	42	0	0	106	15	14.1509434	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.033905568	1.033905568	1	0	0	1	0	0	0	0	3	1.29E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216214021	8	109093656	C	G	RSPO2	CCDS6307.1	r.?	-	-	intronic	24	0	0	76	7	9.210526316	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.672945554	0.672945554	1	0.0025	0.04125	0.95625	0	0	0	0	3	1.26E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216214141	8	109789652	T	G	-	-	-	-	-	-	38	0	0	109	24	22.01834862	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.608719122	1.178471502	1.365089541	0	0	1	0	0	0	0	3	3.27E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216214213	8	110295624	C	G	NUDCD1	CCDS6312.1	r.?	-	-	intronic	33	0	0	102	16	15.68627451	0	0	NA	1	0	0							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.146080943	1.146080943	1	0	0	1	0	0	0	0	3	1.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216214304	8	110650155	T	G	ENSG00000147642	CCDS47912.1	r.?	-	-	intronic	33	0	0	112	16	14.28571429	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.043752287	1.043752287	1	0	0	1	0	0	0	0	3	9.24E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216214321	8	110806047	T	G	-	-	-	-	-	-	35	0	0	127	20	15.7480315	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.150593073	1.150593073	1	0	0.00125	0.99875	0	0	0	0	3	5.78E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216214763	8	113457214	A	G	CSMD3	CCDS6315.1	r.?	-	-	intronic	31	0	0	93	10	10.75268817	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.785620001	0.785620001	1	0	0.00875	0.99125	0	0	0	0	3	5.41E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216214916	8	114367804	A	G	CSMD3	CCDS6315.1	r.?	-	-	intronic	19	0	0	82	10	12.19512195	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.89100805	0.89100805	1	0	0.0025	0.9975	0	0	0	0	3	1.51E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216215106	8	115484921	A	G	-	-	-	-	-	-	43	0	0	79	12	15.18987342	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.109812559	1.109812559	1	0	0.0025	0.9975	0	0	0	0	3	9.17E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216215230	8	116231903	A	G	-	-	-	-	-	-	43	0	0	113	27	23.89380531	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.745744976	0.872872488	2	0	0.00125	0.99875	0	0	0	0	3	4.16E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216215279	8	116533748	A	G	TRPS1	CCDS6318.2	r.?	-	-	intronic	29	0	0	87	13	14.94252874	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.091740898	1.091740898	1	0	0.00125	0.9975	0.00125	0	0	0	3	8.85E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216215444	8	117474194	C	G	-	-	-	-	-	-	37	0	0	65	22	33.84615385	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	2.472890035	1.045579878	2.365089541	0	0	1	0	0	0	0	3	2.36E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216215548	8	118148717	T	G	SLC30A8	CCDS6322.1	r.?	-	-	intronic	44	0	0	116	33	28.44827586	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	2.07850671	1.039253355	2	0	0	1	0	0	0	0	3	7.70E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1216215650	8	118825463	A	G	EXT1	CCDS6324.1	r.?	-	-	intronic	34	0	0	122	11	9.016393443	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.65876169	0.65876169	1	0.00125	0.045	0.95375	0	0	0	0	3	4.12E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216215873	8	119953308	C	G	TNFRSF11B	CCDS6326.1	r.?	-	-	intronic	51	0	0	116	14	12.06896552	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.881790726	0.881790726	1	0	0.00375	0.99625	0	0	0	0	3	1.53E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216215999	8	120629647	C	G	ENPP2	CCDS6329.1	r.?	-	-	intronic	29	0	0	102	14	13.7254902	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.002820825	1.002820825	1	0	0.00125	0.99875	0	0	0	0	3	2.41E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216216162	8	121298541	C	G	COL14A1	CCDS34938.1	r.?	-	-	intronic	34	0	0	69	12	17.39130435	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.270654959	1.270654959	1	0	0	1	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216216301	8	122109513	T	G	-	-	-	-	-	-	37	0	0	87	6	6.896551724	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.503880415	1.38015571	0.365089541	0	0.0025	0.9975	0	0	0	0	3	5.58E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216216327	8	122238219	A	G	-	-	-	-	-	-	33	0	0	107	16	14.95327103	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.092525759	1.092525759	1	0	0.00375	0.99625	0	0	0	0	3	4.31E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216216806	8	124739427	C	G	ANXA13	CCDS34939.1	r.?	-	-	intronic	38	0	0	121	31	25.61983471	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.871853276	0.935926638	2	0	0	1	0	0	0	0	3	1.99E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1216217247	8	127340834	T	G	AC087667.1	ENST00000500180	r.424u>g	-	-	non-coding variant	27	0	0	88	28	31.81818182	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	2.324721004	0.982931497	2.365089541	0	0	1	0	0	0	0	3	2.04E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1216217693	8	129370135	T	G	-	-	-	-	-	-	40	0	0	104	39	37.5	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	2.471556505	0.932789242	2.649640877	0	0.00125	0.99875	0	0	0	0	3	8.11E-62	1	1	1	NA	NA	NA
1353824	PD9772b	1216217855	8	130280680	A	G	-	-	-	-	-	-	32	0	0	98	19	19.3877551	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.277811527	1.277811527	1	0	0	1	0	0	0	0	3	1.13E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216218304	8	132978562	T	G	EFR3A	CCDS34942.2	r.?	-	-	intronic	33	0	0	98	23	23.46938776	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.546824479	0.937673467	1.649640877	0	0.00125	0.99875	0	0	0	0	3	1.22E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216219459	8	139216444	A	G	FAM135B	CCDS6375.2	r.?	-	-	intronic	37	0	0	83	18	21.68674699	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.429333883	1.429333883	1	0	0	1	0	0	0	0	3	2.09E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216220262	8	145787870	A	G	ENSG00000147799	CCDS34971.1	r.?	-	-	intronic	42	0	0	26	4	15.38461538	0	0	NA	0	0	NA							0.196534454	0	0	0.803465546	1	0	0.196534454	unphased	0.17503245	0.890594226	0.196534454	0	0.02	0.98	0	0	0	0	3	8.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216221475	9	5322868	A	G	-	-	-	-	-	-	28	0	0	105	51	48.57142857	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.371428571	1.123809524	3	0	0	1	0	0	0	0	3	1.03E-87	1	1	1	NA	NA	NA
1353824	PD9772b	1216221739	9	6537374	A	G	GLDC	CCDS34987.1	r.?	-	-	intronic	39	0	0	68	36	52.94117647	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.674740484	0.918685121	4	0	0	1	0	0	0	0	3	3.15E-64	1	1	1	NA	NA	NA
1353824	PD9772b	1216221764	9	6664543	C	G	-	-	-	-	-	-	59	0	0	76	46	60.52631579	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.20123839	1.050309598	4	0	0	1	0	0	0	0	3	1.58E-85	1	1	1	NA	NA	NA
1353824	PD9772b	1216222048	9	8166424	A	G	-	-	-	-	-	-	32	0	0	110	22	20	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	1.388235294	1.388235294	1	0	0	1	0	0	0	0	3	1.19E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216222189	9	8885801	T	G	PTPRD	CCDS43786.1	r.?	-	-	intronic	29	0	0	64	12	18.75	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	1.301470588	1.301470588	1	0	0	1	0	0	0	0	3	6.30E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216222409	9	9810610	A	G	PTPRD	CCDS43786.1	r.?	-	-	intronic	33	0	0	108	6	5.555555556	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	0.385620915	0.385620915	1	0.0775	0.4775	0.445	0	0	0	0	2	1.93E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216222640	9	10670852	C	G	-	-	-	-	-	-	32	0	0	105	43	40.95238095	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	2.842577031	0.947525677	3	0	0	1	0	0	0	0	3	4.77E-70	1	1	1	NA	NA	NA
1353824	PD9772b	1216222982	9	11944563	C	G	-	-	-	-	-	-	52	0	0	149	62	41.61073826	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	2.888274773	0.962758258	3	0	0	1	0	0	0	0	3	8.11E-101	1	1	1	NA	NA	NA
1353824	PD9772b	1216223023	9	12083622	A	G	-	-	-	-	-	-	22	0	0	98	11	11.2244898	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	0.779111645	0.779111645	1	0.00125	0.0275	0.97125	0	0	0	0	3	3.67E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216223308	9	13164476	C	G	MPDZ	CCDS47951.1	r.?	-	-	intronic	29	0	0	115	15	13.04347826	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	0.905370844	0.905370844	1	0	0	1	0	0	0	0	3	4.57E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216223676	9	15186394	T	G	TTC39B	CCDS6477.1	r.?	-	-	intronic	33	0	0	98	39	39.79591837	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.966386555	0.983193277	2	0	0	1	0	0	0	0	3	4.54E-63	1	1	1	NA	NA	NA
1353824	PD9772b	1216224169	9	17700549	A	G	SH3GL2	CCDS6483.1	r.?	-	-	intronic	41	0	0	80	8	10	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	0.694117647	0.694117647	1	0.00125	0.035	0.96375	0	0	0	0	3	8.22E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216224483	9	19135175	C	G	PLIN2	ENST00000434144	r.?	-	-	intronic	22	0	0	20	15	75	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	5.205882353	1.041176471	5	0	0	1	0	0	0	0	3	4.62E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216225501	9	28594305	T	G	LINGO2	CCDS6524.1	r.?	-	-	intronic	32	0	0	122	20	16.39344262	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	1.137897782	1.137897782	1	0	0	1	0	0	0	0	3	2.47E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216226150	9	31435371	C	G	-	-	-	-	-	-	45	0	0	91	35	38.46153846	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.900452489	0.950226244	2	0	0	1	0	0	0	0	3	4.08E-56	1	1	1	NA	NA	NA
1353824	PD9772b	1216226404	9	33090357	A	G	-	-	-	-	-	-	39	0	0	119	70	58.82352941	0	0	NA	0	0	NA							4.816361473	4	0	0.183638527	4	1	0.816361473	unphased	3.386787026	1.063810165	3.183638527	0	0	1	0	0	0	0	3	5.09E-128	1	1	1	NA	NA	NA
1353824	PD9772b	1216226655	9	33830764	C	G	UBE2R2	CCDS6546.1	r.?	-	-	intronic	26	0	0	54	8	14.81481481	0	0	NA	0	0	NA							4.816361473	4	0	0.183638527	4	1	0.816361473	unphased	0.852968584	1.044841792	0.816361473	0	0.00875	0.99125	0	0	0	0	3	3.31E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216226834	9	34537341	A	G	-	-	-	-	-	-	29	0	0	46	28	60.86956522	0	0	NA	0	0	NA							4.816361473	4	0	0.183638527	4	1	0.816361473	unphased	3.504588313	1.100812257	3.183638527	0	0	1	0	0	0	0	3	9.63E-53	1	1	1	NA	NA	NA
1353824	PD9772b	1216226949	9	35046840	C	G	C9orf131	CCDS6572.2	r.?	-	-	downstream	33	0	0	80	14	17.5	0	0	NA	0	0	NA							4.816361473	4	0	0.183638527	4	1	0.816361473	unphased	1.00756914	1.00756914	1	0	0.00375	0.99625	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216227022	9	35325216	A	G	UNC13B	CCDS6579.1	r.?	-	-	intronic	41	0	0	127	75	59.05511811	0	0	NA	0	0	NA							4.816361473	4	0	0.183638527	4	1	0.816361473	unphased	3.400120833	1.067998394	3.183638527	0	0	1	0	0	0	0	3	3.08E-137	1	1	1	NA	NA	NA
1353824	PD9772b	1216228680	9	45394872	A	G	-	-	-	-	-	-	8	0	0	57	17	29.8245614	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.473684211	1.473684211	1	0	0	1	0	0	0	0	3	8.82E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216229060	9	66252316	A	G	-	-	-	-	-	-	31	0	0	103	11	10.67961165	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.527698458	0.527698458	1	0.01375	0.31375	0.6725	0	0	0	0	3	6.39E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216230848	9	68297387	T	G	-	-	-	-	-	-	46	0	0	84	13	15.47619048	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.01875	0.98125	0	0	0	0	3	5.49E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216235819	9	70488592	C	G	CBWD5	CCDS43831.1	r.?	-	-	intronic	26	0	0	65	12	18.46153846	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.912217195	0.912217195	1	0	0.00375	0.99625	0	0	0	0	3	7.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216236423	9	74048865	A	G	TRPM3	ENST00000357533	r.?	-	-	intronic	28	0	0	56	10	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.015	0.985	0	0	0	0	3	2.82E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216236591	9	75187184	C	G	TMC1	CCDS6643.1	r.?	-	-	intronic	31	0	0	38	6	15.78947368	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.780185759	0.780185759	1	0	0.025	0.975	0	0	0	0	3	3.76E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216236737	9	76204450	C	G	-	-	-	-	-	-	34	0	0	87	16	18.3908046	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.90872211	0.90872211	1	0	0.00375	0.99625	0	0	0	0	3	1.29E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216236839	9	76796573	C	G	-	-	-	-	-	-	36	0	0	85	19	22.35294118	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.10449827	1.10449827	1	0	0	1	0	0	0	0	3	5.93E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216236897	9	77249649	C	G	RORB	CCDS6646.1	r.808c>g	c.196C>G	p.R66G	missense	34	0	0	84	15	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.0025	0.9975	0	0	0	0	3	3.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216237795	9	83845959	C	G	-	-	-	-	-	-	31	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0	1	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216238144	9	86394192	A	G	GKAP1	CCDS35049.1	r.?	-	-	intronic	38	0	0	80	13	16.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.802941176	0.802941176	1	0	0.01	0.99	0	0	0	0	3	2.82E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216238227	9	86999178	C	G	-	-	-	-	-	-	39	0	0	36	8	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.00375	0.99625	0	0	0	0	3	1.04E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216238233	9	87024636	C	G	-	-	-	-	-	-	29	0	0	10	4	40	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.976470588	1.976470588	1	0	0.005	0.995	0	0	0	0	3	1.28E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216238288	9	87438735	C	G	NTRK2	CCDS35051.1	r.?	-	-	intronic	36	0	0	62	8	12.90322581	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.637571157	0.637571157	1	0	0.0625	0.9375	0	0	0	0	3	1.04E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216238395	9	88351231	C	G	AGTPBP1	CCDS6672.1	r.?	-	-	intronic	39	0	0	79	10	12.65822785	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.625465376	0.625465376	1	0.0025	0.075	0.9225	0	0	0	0	3	1.03E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216238547	9	89359751	C	G	-	-	-	-	-	-	26	0	0	74	18	24.32432432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.20190779	1.20190779	1	0	0	1	0	0	0	0	3	2.13E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216238826	9	91416675	C	G	-	-	-	-	-	-	27	0	0	82	16	19.51219512	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.964131994	0.964131994	1	0	0.00125	0.99875	0	0	0	0	3	4.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216238997	9	93401006	C	G	DIRAS2	CCDS6687.1	r.?	-	-	intronic	28	0	0	84	10	11.9047619	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.588235294	0.588235294	1	0.00125	0.14125	0.8575	0	0	0	0	3	1.93E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216239026	9	93532885	C	G	-	-	-	-	-	-	29	0	0	70	12	17.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.847058824	0.847058824	1	0	0.005	0.995	0	0	0	0	3	1.99E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216239226	9	95572374	A	G	ENSG00000218940	ENST00000375504	r.?	-	-	intronic	39	0	0	47	7	14.89361702	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.7359199	0.7359199	1	0	0.03	0.97	0	0	0	0	3	4.12E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216239549	9	98505246	C	G	-	-	-	-	-	-	45	0	0	56	13	23.21428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.147058824	1.147058824	1	0	0.00125	0.99875	0	0	0	0	3	1.89E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216239751	9	100302748	T	G	TMOD1	CCDS6726.1	r.?	-	-	intronic	35	0	0	82	23	28.04878049	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.385939742	1.385939742	1	0	0	1	0	0	0	0	3	1.19E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216239763	9	100423853	A	G	NCBP1	CCDS6728.1	r.?	-	-	intronic	31	0	0	106	17	16.03773585	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.952830189	0.952830189	1	0	0.0025	0.9975	0	0	0	0	3	9.78E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216240015	9	101919840	C	G	TGFBR1	CCDS6738.1	r.?	-	-	downstream	35	0	0	110	18	16.36363636	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.972192513	0.972192513	1	0	0	1	0	0	0	0	3	4.92E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216240206	9	103466971	C	G	-	-	-	-	-	-	35	0	0	82	13	15.85365854	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.941893831	0.941893831	1	0	0	1	0	0	0	0	3	3.95E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216240216	9	103528956	A	G	-	-	-	-	-	-	32	0	0	100	21	21	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.247647059	1.247647059	1	0	0	1	0	0	0	0	3	6.67E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216240233	9	103639293	A	G	-	-	-	-	-	-	38	0	0	101	16	15.84158416	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.00375	0.99625	0	0	0	0	3	1.63E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216240234	9	103645581	A	G	-	-	-	-	-	-	42	0	0	88	11	12.5	165	0	0	263	39	14.82889734							5	3	2	1	NA	NA	NA	unphased	0.742647059	0.742647059	1	0	0.025	0.975	0	0	0	0	3	1.10E-12	1	3.67E-44	1	YES	somatic	1_1
1353824	PD9772b	1216240294	9	104108514	C	G	-	-	-	-	-	-	40	0	0	90	20	22.22222222	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.320261438	1.320261438	1	0	0	1	0	0	0	0	3	3.48E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216240295	9	104131597	A	G	BAAT	CCDS6752.1	r.?	-	-	intronic	33	0	0	111	14	12.61261261	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.749337573	0.749337573	1	0.00125	0.0125	0.98625	0	0	0	0	3	8.15E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216240621	9	106271263	C	G	-	-	-	-	-	-	28	0	0	97	21	21.64948454	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.286234081	1.286234081	1	0	0	1	0	0	0	0	3	3.31E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216240737	9	107191779	C	G	-	-	-	-	-	-	54	0	0	32	13	40.625	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.413602941	0.804534314	3	0	0.0075	0.9925	0	0	0	0	3	3.88E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216241290	9	110148373	C	G	-	-	-	-	-	-	31	0	0	84	14	16.66666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.990196078	0.990196078	1	0	0.00125	0.99875	0	0	0	0	3	1.40E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216241505	9	111297650	A	G	-	-	-	-	-	-	35	0	0	118	26	22.03389831	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.309072782	1.309072782	1	0	0	1	0	0	0	0	3	8.93E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216242732	9	118362083	A	G	-	-	-	-	-	-	39	0	0	56	14	25	1	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	2.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216242779	9	118860851	A	G	-	-	-	-	-	-	38	0	0	69	25	36.23188406	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.427962489	0.713981245	2	0	0.03	0.97	0	0	0	0	3	1.00E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216243069	9	121689134	T	G	-	-	-	-	-	-	28	0	0	72	19	26.38888889	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.04003268	1.04003268	1	0	0	1	0	0	0	0	3	1.75E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216243195	9	123197367	C	G	CDK5RAP2	CCDS6823.1	r.?	-	-	intronic	32	0	0	57	15	26.31578947	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.037151703	1.037151703	1	0	0.0025	0.9975	0	0	0	0	3	5.53E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216243381	9	125123864	C	G	-	-	-	-	-	-	41	0	0	33	12	36.36363636	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.43315508	1.43315508	1	0	0.00125	0.99875	0	0	0	0	3	7.86E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216243844	9	129802710	T	G	RALGPS1	CCDS35143.1	r.?	-	-	intronic	17	0	0	50	19	38	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.497647059	0.748823529	2	0	0.02	0.98	0	0	0	0	3	5.00E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216243908	9	130975511	C	G	DNM1	CCDS43882.1	r.?	-	-	intronic	31	0	0	21	4	19.04761905	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.75070028	0.75070028	1	0.00125	0.03125	0.9675	0	0	0	0	3	3.49E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216244132	9	134299748	C	G	BAT2L1	ENST00000405995	r.?	-	-	intronic	32	0	0	14	6	42.85714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.68907563	1.68907563	1	0	0.00125	0.99875	0	0	0	0	3	4.53E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216244244	9	135815307	T	G	TSC1	CCDS6956.1	r.?	-	-	intronic	35	0	0	71	18	25.35211268	0	0	NA	0	0	NA							0.39654818	0	0	0.60345182	1	0	0.39654818	unphased	0.339141461	0.855233936	0.39654818	0	0.0025	0.9975	0	0	0	0	3	9.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216244859	X	3393845	A	G	-	-	-	-	-	-	31	0	0	67	10	14.92537313	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	1.87E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216244915	X	3667231	C	G	-	-	-	-	-	-	31	0	0	30	10	33.33333333	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	2.68E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216245058	X	4809367	A	G	-	-	-	-	-	-	26	0	0	86	10	11.62790698	0	0	NA	1	0	0							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	2.45E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216245130	X	5187342	C	G	-	-	-	-	-	-	30	0	0	31	9	29.03225806	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.434535104	1.434535104	1	0	0	1	0	0	0	0	3	3.57E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216245180	X	5432185	T	G	-	-	-	-	-	-	36	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0.00125	0.99875	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216245212	X	5603435	C	G	-	-	-	-	-	-	42	0	0	79	12	15.18987342	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.750558451	0.750558451	1	0	0.02125	0.97875	0	0	0	0	3	9.17E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216245489	X	7674253	A	G	-	-	-	-	-	-	36	0	0	65	18	27.69230769	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.368325792	1.368325792	1	0	0	1	0	0	0	0	3	1.52E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216245623	X	8862403	A	G	-	-	-	-	-	-	31	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0.00125	0.99875	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216246351	X	15450441	T	G	PIR	CCDS14167.1	r.?	-	-	intronic	34	0	0	80	21	26.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.034558824	1.034558824	1	0	0.0025	0.9975	0	0	0	0	3	3.63E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216246496	X	17267107	C	G	-	-	-	-	-	-	39	0	0	60	23	38.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.510784314	0.755392157	2	0	0.01	0.99	0	0	0	0	3	2.33E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216246635	X	18903852	C	G	-	-	-	-	-	-	33	0	0	42	14	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.00125	0.99875	0	0	0	0	3	2.83E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216246772	X	20758703	C	G	-	-	-	-	-	-	32	0	0	58	13	22.4137931	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.88336714	0.88336714	1	0	0.005	0.995	0	0	0	0	3	3.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216246778	X	20970431	C	G	-	-	-	-	-	-	37	0	0	62	10	16.12903226	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.635673624	0.635673624	1	0	0.07375	0.92625	0	0	0	0	3	8.29E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216246958	X	23289284	C	G	-	-	-	-	-	-	43	0	0	59	16	27.11864407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.068793619	1.068793619	1	0	0	1	0	0	0	0	3	1.37E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216247209	X	25722124	T	G	-	-	-	-	-	-	42	0	0	68	13	19.11764706	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.753460208	0.753460208	1	0.00125	0.01625	0.9825	0	0	0	0	3	2.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216247300	X	27068323	A	G	-	-	-	-	-	-	33	0	0	64	16	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	5.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216247910	X	33389952	C	G	-	-	-	-	-	-	37	0	0	63	22	34.92063492	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.376283847	1.376283847	1	0	0	1	0	0	0	0	3	1.03E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216247982	X	34510777	T	G	-	-	-	-	-	-	26	0	0	57	16	28.07017544	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.10629515	1.10629515	1	0	0.0025	0.9975	0	0	0	0	3	7.28E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216248054	X	35592208	A	G	-	-	-	-	-	-	34	0	0	38	9	23.68421053	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.933436533	0.933436533	1	0	0.005	0.995	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216248060	X	35677605	A	G	-	-	-	-	-	-	30	0	0	48	11	22.91666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.903186275	0.903186275	1	0	0.00625	0.99375	0	0	0	0	3	9.31E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216248156	X	36923269	C	G	-	-	-	-	-	-	24	0	0	40	11	27.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.083823529	1.083823529	1	0	0.005	0.995	0	0	0	0	3	9.88E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216248378	X	39403769	A	G	-	-	-	-	-	-	29	0	0	46	14	30.43478261	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.199488491	1.199488491	1	0	0	1	0	0	0	0	3	1.26E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216248451	X	40330038	C	G	-	-	-	-	-	-	37	0	0	67	19	28.35820896	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.117647059	1.117647059	1	0	0	1	0	0	0	0	3	3.67E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216248616	X	42002650	A	G	-	-	-	-	-	-	26	0	0	79	17	21.51898734	0	0	NA	1	0	0							3	2	1	1	NA	NA	NA	unphased	0.848101266	0.848101266	1	0	0.005	0.995	0	0	0	0	3	4.55E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216249329	X	50994956	C	G	-	-	-	-	-	-	29	0	0	57	15	26.31578947	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.300309598	1.300309598	1	0	0	1	0	0	0	0	3	5.53E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216249750	X	55050085	T	G	ALAS2	CCDS14366.1	r.?	-	-	intronic	22	0	0	71	16	22.53521127	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.113504557	1.113504557	1	0	0.00125	0.99875	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216249840	X	55855309	C	G	-	-	-	-	-	-	22	0	0	72	12	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0.00125	0.01125	0.9875	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216250097	X	58195037	A	G	-	-	-	-	-	-	20	0	0	91	14	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.01875	0.98125	0	0	0	0	3	4.55E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216251290	X	62368567	T	G	-	-	-	-	-	-	58	0	0	149	16	10.73825503	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.530596131	0.530596131	1	0.01125	0.49375	0.495	0	0	0	0	3	9.98E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216251363	X	63174269	T	G	-	-	-	-	-	-	39	0	0	82	23	28.04878049	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.385939742	1.385939742	1	0	0	1	0	0	0	0	3	1.19E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216251704	X	65800372	T	G	-	-	-	-	-	-	37	0	0	87	6	6.896551724	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.340770791	0.340770791	1	0.1575	0.6575	0.185	0	0	0	0	2	5.58E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216251711	X	65847303	A	G	EDA2R	CCDS14386.1	r.?	-	-	intronic	29	0	0	84	23	27.38095238	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.352941176	1.352941176	1	0	0	1	0	0	0	0	3	2.25E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216252454	X	71711839	C	G	HDAC8	CCDS14420.1	r.?	-	-	intronic	39	0	0	99	24	24.24242424	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.197860963	1.197860963	1	0	0	1	0	0	0	0	3	2.52E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216252480	X	71946904	C	G	-	-	-	-	-	-	36	0	0	86	16	18.60465116	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.919288646	0.919288646	1	0	0	1	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216252967	X	76750791	A	G	-	-	-	-	-	-	35	0	0	76	17	22.36842105	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.105263158	1.105263158	1	0	0	1	0	0	0	0	3	2.21E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216252970	X	76796932	C	G	ATRX	CCDS14434.1	r.?	-	-	intronic	26	0	0	67	5	7.462686567	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.368744513	0.368744513	1	0.08375	0.47125	0.445	0	0	0	0	2	2.33E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216253148	X	78240387	T	G	-	-	-	-	-	-	30	0	0	75	13	17.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.856470588	0.856470588	1	0	0.01	0.99	0	0	0	0	3	1.16E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216253267	X	79039823	A	G	-	-	-	-	-	-	22	0	0	84	12	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.025	0.97375	0	0	0	0	3	1.98E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216253337	X	79433860	A	G	-	-	-	-	-	-	38	0	0	68	18	26.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.307958478	1.307958478	1	0	0	1	0	0	0	0	3	3.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216253403	X	80117708	T	G	-	-	-	-	-	-	40	0	0	84	18	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.00125	0.99875	0	0	0	0	3	2.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216253560	X	81873816	C	G	-	-	-	-	-	-	40	0	0	91	19	20.87912088	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.031674208	1.031674208	1	0	0	1	0	0	0	0	3	2.46E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216253618	X	82704845	C	G	-	-	-	-	-	-	32	0	0	70	14	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.0025	0.9975	0	0	0	0	3	9.08E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216253813	X	84329880	A	G	APOOL	CCDS48138.1	r.?	-	-	intronic	25	0	0	85	24	28.23529412	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.395155709	0.697577855	2	0	0.045	0.955	0	0	0	0	3	3.98E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216253836	X	84535340	A	G	POF1B	CCDS14452.1	r.?	-	-	intronic	33	0	0	78	20	25.64102564	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.266968326	1.266968326	1	0	0	1	0	0	0	0	3	1.43E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216254175	X	87221027	T	G	-	-	-	-	-	-	34	0	0	81	12	14.81481481	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.732026144	0.732026144	1	0	0.0275	0.9725	0	0	0	0	3	1.26E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216254449	X	88868700	A	G	-	-	-	-	-	-	33	0	0	95	30	31.57894737	0	0	NA	0	0	NA							4.615834634	2	2	0.384165366	3	2	0.615834634	unphased	1.754845612	1.086030448	1.615834634	0	0	1	0	0	0	0	3	3.21E-45	1	1	1	NA	NA	NA
1353824	PD9772b	1216254556	X	89863323	A	G	-	-	-	-	-	-	32	0	0	92	17	18.47826087	0	0	NA	0	0	NA							4.615834634	2	2	0.384165366	3	2	0.615834634	unphased	1.026839008	1.026839008	1	0	0.00125	0.99875	0	0	0	0	3	7.54E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216254979	X	93818785	A	G	-	-	-	-	-	-	33	0	0	88	25	28.40909091	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.403743316	0.701871658	2	0	0.04375	0.95625	0	0	0	0	3	1.33E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216255032	X	94183036	C	G	-	-	-	-	-	-	37	0	0	74	15	20.27027027	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.001589825	1.001589825	1	0	0.0025	0.9975	0	0	0	0	3	4.22E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216255742	X	99522188	C	G	-	-	-	-	-	-	41	0	0	20	4	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0.00125	0.015	0.98375	0	0	0	0	3	2.84E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216255762	X	99734842	C	G	-	-	-	-	-	-	24	0	0	74	17	22.97297297	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.135135135	1.135135135	1	0	0	1	0	0	0	0	3	1.34E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216256195	X	103461703	C	G	-	-	-	-	-	-	37	0	0	48	7	14.58333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.720588235	0.720588235	1	0	0.025	0.975	0	0	0	0	3	4.81E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216256265	X	104189780	T	G	IL1RAPL2	CCDS14517.1	r.?	-	-	intronic	27	0	0	67	15	22.3880597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.106233538	1.106233538	1	0	0	1	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216256306	X	104631529	T	G	IL1RAPL2	CCDS14517.1	r.?	-	-	intronic	41	0	0	67	11	16.41791045	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.811237928	0.811237928	1	0	0.0175	0.9825	0	0	0	0	3	4.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216256354	X	105208789	A	G	-	-	-	-	-	-	32	0	0	69	12	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.0025	0.9975	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216256599	X	107306585	A	G	VSIG1	CCDS14535.1	r.?	-	-	intronic	29	0	0	67	11	16.41791045	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.811237928	0.811237928	1	0	0.01	0.99	0	0	0	0	3	4.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216256634	X	107646941	A	G	COL4A6	CCDS14542.1	r.?	-	-	intronic	32	0	0	72	10	13.88888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.68627451	0.68627451	1	0	0.045	0.955	0	0	0	0	3	3.95E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216257119	X	112255227	A	G	-	-	-	-	-	-	31	0	0	52	10	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0.00625	0.99375	0	0	0	0	3	1.28E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216257205	X	112761742	A	G	-	-	-	-	-	-	36	0	0	70	18	25.71428571	241	0	0	287	58	20.20905923							4	2	2	1	NA	NA	NA	unphased	1.270588235	1.270588235	1	0	0	1	0	0	0	0	3	6.91E-26	1	3.54E-73	1	YES	somatic	1_1
1353824	PD9772b	1216257233	X	112944574	C	G	-	-	-	-	-	-	37	0	0	42	8	19.04761905	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.005	0.995	0	0	0	0	3	3.96E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216257594	X	115672282	C	G	-	-	-	-	-	-	43	0	0	89	15	16.85393258	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.832782551	0.832782551	1	0	0.00625	0.99375	0	0	0	0	3	8.23E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216257728	X	116655139	T	G	-	-	-	-	-	-	35	0	0	84	12	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0	0.0275	0.9725	0	0	0	0	3	1.98E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216257957	X	118470493	C	G	-	-	-	-	-	-	38	0	0	83	12	14.45783133	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.71438696	0.71438696	1	0	0.04	0.96	0	0	0	0	3	1.70E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216258118	X	119783716	A	G	-	-	-	-	-	-	34	0	0	65	14	21.53846154	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.064253394	1.064253394	1	0	0	1	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216258201	X	120660256	C	G	-	-	-	-	-	-	19	0	0	56	12	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.0025	0.9975	0	0	0	0	3	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216258322	X	121778772	C	G	-	-	-	-	-	-	32	0	0	88	5	5.681818182	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.280748663	0.280748663	1	0.26875	0.6425	0.08875	0	0	0	0	2	8.67E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216258417	X	122591780	A	G	GRIA3	ENST00000264357	r.?	-	-	intronic	31	0	0	97	24	24.74226804	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.222559127	1.222559127	1	0	0	1	0	0	0	0	3	1.46E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216258696	X	124896908	C	G	-	-	-	-	-	-	33	0	0	68	11	16.17647059	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	0.799307958	0.799307958	1	0	0.01125	0.98875	0	0	0	0	3	5.76E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216258767	X	125518191	T	G	-	-	-	-	-	-	25	0	0	50	9	18	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.889411765	0.889411765	1	0	0.01125	0.98875	0	0	0	0	3	4.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216258938	X	126962318	C	G	-	-	-	-	-	-	40	0	0	91	16	17.58241758	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.868778281	0.868778281	1	0	0.00375	0.99625	0	0	0	0	3	2.79E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216258989	X	127474250	T	G	-	-	-	-	-	-	39	0	0	71	14	19.71830986	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.974316487	0.974316487	1	0	0	1	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216259161	X	129037476	C	G	UTP14A	CCDS14615.1	r.?	-	-	upstream	28	0	0	66	11	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0.00125	0.0075	0.99125	0	0	0	0	3	4.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216259206	X	129545594	A	G	RBMX2	CCDS43993.1	r.?	-	-	intronic	34	0	0	74	12	16.21621622	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.80127186	0.80127186	1	0	0.00875	0.99125	0	0	0	0	3	4.02E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216259443	X	131906041	C	G	HS6ST2	CCDS48169.1	r.?	-	-	intronic	38	0	0	86	16	18.60465116	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.919288646	0.919288646	1	0	0.00125	0.99875	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216259576	X	133402641	C	G	-	-	-	-	-	-	30	0	0	66	17	25.75757576	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.272727273	1.272727273	1	0	0	1	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216259712	X	134553301	C	G	-	-	-	-	-	-	31	0	0	88	23	26.13636364	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.29144385	1.29144385	1	0	0.00125	0.99875	0	0	0	0	3	7.59E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216259794	X	135218598	A	G	-	-	-	-	-	-	34	0	0	78	12	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.01375	0.98625	0	0	0	0	3	7.82E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216259872	X	135863644	C	G	ARHGEF6	CCDS14660.1	r.604g>c	c.?	p.?	5'UTR variant	38	0	0	75	16	21.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.054117647	1.054117647	1	0	0.00125	0.99875	0	0	0	0	3	9.88E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216259884	X	135949342	A	G	RBMX	ENST00000419968	r.?	-	-	downstream	28	0	0	70	13	18.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.917647059	0.917647059	1	0	0.00125	0.99875	0	0	0	0	3	4.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216259984	X	136718902	C	G	-	-	-	-	-	-	33	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0.005	0.995	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216260065	X	137295940	C	G	-	-	-	-	-	-	38	0	0	78	11	14.1025641	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.696832579	0.696832579	1	0	0.05375	0.94625	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216260560	X	141397977	C	G	-	-	-	-	-	-	34	0	0	73	20	27.39726027	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.353746978	1.353746978	1	0	0	1	0	0	0	0	3	3.18E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216260670	X	142328260	C	G	-	-	-	-	-	-	41	0	0	70	14	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00375	0.99625	0	0	0	0	3	9.08E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216260779	X	143370118	C	G	-	-	-	-	-	-	31	0	0	56	11	19.64285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.970588235	0.970588235	1	0	0.0025	0.9975	0	0	0	0	3	5.91E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216260931	X	144425069	A	G	-	-	-	-	-	-	43	0	0	68	14	20.58823529	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.017301038	1.017301038	1	0	0.00125	0.99875	0	0	0	0	3	5.84E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216261085	X	145932814	A	G	-	-	-	-	-	-	31	0	0	76	10	13.15789474	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.650154799	0.650154799	1	0.00125	0.05875	0.94	0	0	0	0	3	6.90E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216261576	X	149837330	A	G	MTM1	CCDS14694.1	r.?	-	-	intronic	32	0	0	68	14	20.58823529	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.223183391	1.223183391	1	0	0	1	0	0	0	0	3	5.84E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216261638	X	150323058	A	G	-	-	-	-	-	-	32	0	0	74	13	17.56756757	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.043720191	1.043720191	1	0	0	1	0	0	0	0	3	9.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216261735	X	151041387	A	G	-	-	-	-	-	-	44	0	0	94	13	13.82978723	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.821652065	0.821652065	1	0	0.00875	0.99125	0	0	0	0	3	2.52E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216261752	X	151202180	T	G	-	-	-	-	-	-	28	0	0	89	17	19.1011236	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.134831461	1.134831461	1	0	0	1	0	0	0	0	3	4.11E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216261819	X	151894978	C	G	MAGEA12	CCDS14710.1	r.?	-	-	downstream	34	0	0	75	24	32	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.901176471	0.950588235	2	0	0.00125	0.99875	0	0	0	0	3	1.20E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216262061	X	154474485	A	G	-	-	-	-	-	-	44	0	0	75	14	18.66666667	0	0	NA	2	0	0							5	3	2	1	NA	NA	NA	unphased	1.109019608	1.109019608	1	0	0.00125	0.99875	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215835047	1	5285277	G	T	-	-	-	-	-	-	20	0	0	43	20	46.51162791	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.970842164	0.970842164	1	0	0	1	0	0	0	0	3	8.21E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215835272	1	6048662	C	T	NPHP4	CCDS44052.1	r.?	-	-	intronic	33	0	0	39	6	15.38461538	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.321124716	0.321124716	1	0.235	0.72625	0.03875	0	0	0	0	2	4.43E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215835461	1	7979511	A	T	TNFRSF9	CCDS92.1	r.?	-	-	downstream	30	0	0	69	37	53.62318841	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	1.119282524	1.119282524	1	0	0	1	0	0	0	0	3	2.94E-66	1	1	1	NA	NA	NA
1353824	PD9772b	1215835506	1	8369503	A	T	-	-	-	-	-	-	35	0	0	48	17	35.41666667	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.739255856	0.739255856	1	0	0.02125	0.97875	0	0	0	0	3	2.80E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215836346	1	14404558	C	T	C1orf196	ENST00000412667	r.?	-	-	intronic	28	0	0	64	13	20.3125	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.423984976	0.423984976	1	0.08625	0.88	0.03375	0	0	0	0	2	1.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215836436	1	15076041	A	T	ENSG00000189337	CCDS152.2	r.?	-	-	intronic	28	0	0	56	8	14.28571429	208	0	0	91	10	10.98901099							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.298187236	0.298187236	1	0.36625	0.62625	0.0075	0	0	0	0	2	4.48E-10	1	4.34E-11	1	YES	somatic	1_1
1353824	PD9772b	1215836575	1	16280103	C	T	ZBTB17	CCDS165.1	r.?	-	-	intronic	38	0	0	8	4	50	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	1.043655326	1.043655326	1	0.00125	0.01	0.98875	0	0	0	0	3	4.31E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215837232	1	18534855	C	T	IGSF21	CCDS184.1	r.?	-	-	intronic	19	0	0	20	9	45	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.939289794	0.939289794	1	0	0.00625	0.99375	0	0	0	0	3	3.12E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215837391	1	19847120	C	T	-	-	-	-	-	-	26	0	0	26	5	19.23076923	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.401405895	0.401405895	1	0.07375	0.52125	0.405	0	0	0	0	2	1.88E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215837582	1	21352725	A	T	EIF4G3	CCDS214.1	r.?	-	-	intronic	31	0	0	80	23	28.75	0	0	NA	0	0	NA							1.146134182	1	0	0.853865818	1	1	0.146134182	unphased	0.600101813	0.600101813	1	0.00125	0.44375	0.555	0	0	0	0	3	6.19E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215838474	1	29785940	G	T	ENSG00000231360	ENST00000455342	r.?	-	-	intronic	31	0	0	20	4	20	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.588235294	0.588235294	1	0.0025	0.0675	0.93	0	0	0	0	3	2.84E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215838478	1	29868408	A	T	-	-	-	-	-	-	24	0	0	23	6	26.08695652	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.767263427	0.767263427	1	0	0.025	0.975	0	0	0	0	3	1.47E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215838524	1	30420948	G	T	-	-	-	-	-	-	30	0	0	57	15	26.31578947	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.773993808	0.773993808	1	0	0.01125	0.98875	0	0	0	0	3	5.53E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215838527	1	30478858	C	T	-	-	-	-	-	-	27	0	0	70	11	15.71428571	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.462184874	0.462184874	1	0.0325	0.7125	0.255	0	0	0	0	2	8.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215838528	1	30483410	A	T	-	-	-	-	-	-	32	0	0	6	3	50	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	1.470588235	1.470588235	1	0	0.01375	0.98625	0	0	0	0	3	2.47E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215838729	1	32002251	A	T	-	-	-	-	-	-	35	0	0	51	15	29.41176471	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.865051903	0.865051903	1	0	0.00375	0.99625	0	0	0	0	3	8.22E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215839055	1	34609656	C	T	CSMD2	CCDS380.1	r.?	-	-	intronic	41	0	0	80	17	21.25	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.625	0.625	1	0	0.16875	0.83125	0	0	0	0	3	5.75E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215839249	1	36288106	C	T	EIF2C4	CCDS397.1	r.?	-	-	intronic	28	0	0	42	10	23.80952381	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.700280112	0.700280112	1	0.00125	0.03625	0.9625	0	0	0	0	3	1.24E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215839719	1	40130684	A	T	NT5C1A	CCDS440.1	r.?	-	-	intronic	39	0	0	76	16	21.05263158	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.619195046	0.619195046	1	0.00125	0.15875	0.84	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215840010	1	42498589	G	T	-	-	-	-	-	-	36	0	0	45	10	22.22222222	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.653594771	0.653594771	1	0	0.06	0.94	0	0	0	0	3	2.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215840359	1	45512954	C	T	ZSWIM5	CCDS41319.1	r.?	-	-	intronic	27	0	0	69	16	23.1884058	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.145780051	1.145780051	1	0	0	1	0	0	0	0	3	2.27E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215840840	1	49758183	G	T	AGBL4	CCDS44137.1	r.?	-	-	intronic	39	0	0	30	5	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0.00375	0.01625	0.98	0	0	0	0	3	4.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215841229	1	53108053	G	T	-	-	-	-	-	-	35	0	0	43	9	20.93023256	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.034199726	1.034199726	1	0	0.0075	0.9925	0	0	0	0	3	9.45E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215841349	1	54051225	G	T	GLIS1	CCDS582.1	r.?	-	-	intronic	18	0	0	20	6	30	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.482352941	1.482352941	1	0	0.00375	0.99625	0	0	0	0	3	5.70E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215841791	1	58141953	G	T	DAB1	CCDS607.1	r.?	-	-	intronic	26	0	0	73	13	17.80821918	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.879935536	0.879935536	1	0	0.0025	0.9975	0	0	0	0	3	7.97E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215842253	1	61781963	C	T	NFIA	CCDS44156.1	r.?	-	-	intronic	37	0	0	81	22	27.16049383	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.34204793	1.34204793	1	0	0	1	0	0	0	0	3	6.68E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215842500	1	63191752	C	T	-	-	-	-	-	-	40	0	0	76	13	17.10526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.845201238	0.845201238	1	0	0.0075	0.9925	0	0	0	0	3	1.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215843310	1	69736665	A	T	-	-	-	-	-	-	30	0	0	70	26	37.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.463865546	0.731932773	2	0	0.01625	0.98375	0	0	0	0	3	1.35E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1215843353	1	70363179	G	T	LRRC7	CCDS645.1	r.?	-	-	intronic	34	0	0	62	18	29.03225806	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.144212524	1.144212524	1	0	0	1	0	0	0	0	3	5.72E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215843545	1	72036449	G	T	NEGR1	CCDS661.1	r.?	-	-	intronic	43	0	0	56	14	25	110	0	0	123	19	15.44715447							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	2.91E-20	1	1.13E-22	1	YES	somatic	1_1
1353824	PD9772b	1215843551	1	72086197	G	T	NEGR1	CCDS661.1	r.?	-	-	intronic	43	0	0	57	14	24.56140351	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.968008256	0.968008256	1	0	0.0025	0.9975	0	0	0	0	3	3.84E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215844126	1	78239222	C	T	-	-	-	-	-	-	43	0	0	30	4	13.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.525490196	0.525490196	1	0.00625	0.1	0.89375	0	0	0	0	3	1.54E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215844852	1	85063483	C	T	-	-	-	-	-	-	30	0	0	61	20	32.78688525	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.292189007	1.292189007	1	0	0	1	0	0	0	0	3	4.89E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215844954	1	85881156	A	T	DDAH1	CCDS705.1	r.?	-	-	intronic	25	0	0	52	20	38.46153846	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.515837104	0.757918552	2	0	0.01	0.99	0	0	0	0	3	1.03E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215845981	1	96498247	G	T	-	-	-	-	-	-	25	0	0	73	15	20.54794521	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.809830782	0.809830782	1	0	0.0025	0.9975	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215846083	1	97507129	C	T	-	-	-	-	-	-	33	0	0	73	17	23.28767123	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.917808219	0.917808219	1	0	0.0025	0.9975	0	0	0	0	3	1.03E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215846445	1	101192043	C	T	VCAM1	CCDS773.1	r.?	-	-	intronic	35	0	0	63	21	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	1.08E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215846553	1	102479750	A	T	-	-	-	-	-	-	39	0	0	37	8	21.62162162	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.852146264	0.852146264	1	0	0.005	0.995	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215847132	1	108520743	C	T	-	-	-	-	-	-	25	0	0	34	10	29.41176471	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.15916955	1.15916955	1	0	0	1	0	0	0	0	3	1.15E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215847299	1	110685519	C	T	-	-	-	-	-	-	41	0	0	37	13	35.13513514	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.384737679	1.384737679	1	0	0	1	0	0	0	0	3	3.89E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215847366	1	111851239	A	T	CHIA	CCDS41368.1	r.?	-	-	intronic	32	0	0	55	8	14.54545455	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.573262032	0.573262032	1	0	0.11375	0.88625	0	0	0	0	3	3.86E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215847428	1	112573100	C	T	-	-	-	-	-	-	40	0	0	61	19	31.14754098	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.227579556	1.227579556	1	0	0	1	0	0	0	0	3	4.64E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215847505	1	113293246	G	T	-	-	-	-	-	-	48	0	0	69	21	30.43478261	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.199488491	1.199488491	1	0	0	1	0	0	0	0	3	1.02E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215847557	1	113745294	G	T	-	-	-	-	-	-	39	0	0	58	22	37.93103448	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.494929006	0.747464503	2	0	0.02125	0.97875	0	0	0	0	3	1.13E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215847683	1	115533229	A	T	SYCP1	CCDS879.1	r.?	-	-	intronic	27	0	0	61	16	26.2295082	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.033751205	1.033751205	1	0	0	1	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215848624	1	121183692	C	T	-	-	-	-	-	-	31	0	0	68	15	22.05882353	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.869377163	0.869377163	1	0	0.00125	0.99875	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215856750	1	146679817	C	T	FMO5	CCDS926.1	r.?	-	-	intronic	30	0	0	62	9	14.51612903	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.717267552	0.717267552	1	0	0.02875	0.97125	0	0	0	0	3	3.12E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215858377	1	149391604	G	T	-	-	-	-	-	-	9	0	0	16	5	31.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.544117647	1.544117647	1	0.00125	0.0025	0.99625	0	0	0	0	3	1.30E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215859001	1	153519753	G	T	S100A3	CCDS1043.1	r.?	-	-	downstream	32	0	0	12	3	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.01625	0.98375	0	0	0	0	3	2.66E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215859114	1	154326916	C	T	ATP8B2	CCDS1066.1	r.?	-	-	downstream	40	0	0	63	17	26.98412698	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.333333333	1.333333333	1	0	0	1	0	0	0	0	3	6.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215859196	1	154928772	G	T	PBXIP1	CCDS1074.1	r.?	-	-	upstream	23	0	0	45	10	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.0025	0.9975	0	0	0	0	3	2.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215859526	1	157920171	G	T	-	-	-	-	-	-	35	0	0	59	12	20.33898305	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.004985045	1.004985045	1	0	0.00375	0.99625	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215859808	1	160020133	G	T	KCNJ10	CCDS1193.1	r.?	-	-	intronic	29	0	0	80	13	16.25	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.802941176	0.802941176	1	0	0.01875	0.98125	0	0	0	0	3	2.82E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215860292	1	163372620	A	T	-	-	-	-	-	-	40	0	0	89	20	22.47191011	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.110376735	1.110376735	1	0	0	1	0	0	0	0	3	2.72E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215860345	1	163808782	A	T	-	-	-	-	-	-	30	0	0	71	9	12.67605634	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.626346313	0.626346313	1	0.00125	0.08	0.91875	0	0	0	0	3	1.10E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215860752	1	166641359	G	T	-	-	-	-	-	-	40	0	0	78	14	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.00125	0.99875	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215860804	1	167083490	A	T	DUSP27	CCDS30932.1	r.?	-	-	intronic	35	0	0	71	11	15.49295775	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.765534383	0.765534383	1	0	0.0175	0.9825	0	0	0	0	3	9.49E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215861011	1	168914654	G	T	-	-	-	-	-	-	31	0	0	87	18	20.68965517	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.022312373	1.022312373	1	0	0	1	0	0	0	0	3	5.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215861265	1	170974490	G	T	C1orf129	ENST00000367759	r.?	-	-	intronic	32	0	0	90	14	15.55555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.768627451	0.768627451	1	0.00125	0.01125	0.9875	0	0	0	0	3	3.87E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215861266	1	170974491	C	T	C1orf129	ENST00000367759	r.?	-	-	intronic	31	0	0	86	12	13.95348837	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.689466484	0.689466484	1	0	0.04	0.96	0	0	0	0	3	2.65E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215861498	1	173068321	A	T	-	-	-	-	-	-	28	0	0	80	19	23.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.173529412	1.173529412	1	0	0	1	0	0	0	0	3	1.65E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215861556	1	173559590	G	T	SLC9A11	CCDS1308.1	r.?	-	-	intronic	26	0	0	60	14	23.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.152941176	1.152941176	1	0	0.00125	0.99875	0	0	0	0	3	8.54E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215861700	1	174789684	G	T	RABGAP1L	CCDS1314.1	r.?	-	-	intronic	33	0	0	56	12	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215862162	1	178252772	G	T	RASAL2	CCDS1321.1	r.274g>u	c.222G>T	p.R74R	silent	37	1	2.702702703	65	21	32.30769231	363	0	0	847	127	14.99409681							4	2	2	1	NA	NA	NA	unphased	1.59638009	0.798190045	2	0	0.00125	0.99875	0	0	0	0	3	2.35E-32	0.169281299	1.79E-140	1	YES	somatic	1_1
1353824	PD9772b	1215862375	1	179571865	G	T	TDRD5	CCDS1332.1	r.?	-	-	intronic	38	0	0	81	18	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.0025	0.9975	0	0	0	0	3	1.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215862448	1	180029683	G	T	CEP350	CCDS1336.1	r.?	-	-	intronic	40	0	0	86	20	23.25581395	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.149110807	1.149110807	1	0	0	1	0	0	0	0	3	1.27E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215862760	1	182343458	A	T	-	-	-	-	-	-	35	0	0	65	19	29.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.444343891	0.722171946	2	0	0.02625	0.97375	0	0	0	0	3	1.89E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215863049	1	184509041	G	T	C1orf21	CCDS1362.1	r.?	-	-	intronic	28	0	0	83	26	31.3253012	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.547838412	0.773919206	2	0	0.01125	0.98875	0	0	0	0	3	2.73E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1215863429	1	187564119	A	T	-	-	-	-	-	-	31	0	0	83	18	21.68674699	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.071580439	1.071580439	1	0	0.00125	0.99875	0	0	0	0	3	2.09E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215863924	1	191429133	A	T	-	-	-	-	-	-	43	0	0	84	17	20.23809524	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1	1	1	0	0	1	0	0	0	0	3	1.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215864183	1	193415447	C	T	-	-	-	-	-	-	26	0	0	74	12	16.21621622	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.80127186	0.80127186	1	0	0.00625	0.99375	0	0	0	0	3	4.02E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215864374	1	194488167	A	T	-	-	-	-	-	-	39	0	0	78	15	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0.005	0.995	0	0	0	0	3	9.92E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215864413	1	194858384	A	T	-	-	-	-	-	-	31	0	0	40	8	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.005	0.995	0	0	0	0	3	2.61E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215864561	1	195938155	C	T	-	-	-	-	-	-	51	0	0	62	19	30.64516129	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.514231499	0.75711575	2	0	0.00625	0.99375	0	0	0	0	3	6.66E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215864609	1	196443755	G	T	KCNT2	CCDS1384.1	r.?	-	-	intronic	42	0	0	71	16	22.53521127	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.113504557	1.113504557	1	0	0	1	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215865080	1	199795872	C	T	-	-	-	-	-	-	38	0	0	60	10	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0.00125	0.01125	0.9875	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215865227	1	200669722	C	T	-	-	-	-	-	-	44	0	0	46	5	10.86956522	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.537084399	0.537084399	1	0.01	0.09875	0.89125	0	0	0	0	3	3.61E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215865359	1	201603697	C	T	NAV1	ENST00000367302	r.?	-	-	intronic	35	0	0	86	23	26.74418605	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.321477428	1.321477428	1	0	0	1	0	0	0	0	3	4.16E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215865478	1	202621863	G	T	SYT2	CCDS1427.1	r.?	-	-	intronic	28	0	0	34	4	11.76470588	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.581314879	0.581314879	1	0.00125	0.05375	0.945	0	0	0	0	3	2.57E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215865534	1	202952556	G	T	-	-	-	-	-	-	31	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0.00125	0.99875	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215865570	1	203318937	A	T	FMOD	CCDS30976.1	r.?	-	-	intronic	30	0	0	43	10	23.25581395	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.149110807	1.149110807	1	0	0.00125	0.99875	0	0	0	0	3	1.61E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215865596	1	203508238	C	T	-	-	-	-	-	-	36	0	0	77	16	20.77922078	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.026737968	1.026737968	1	0	0	1	0	0	0	0	3	1.56E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215865702	1	204130412	G	T	REN	CCDS30981.1	r.402+8c>a	c.373+8C>A	p.?	splice region	22	0	0	25	4	16	153	0	0	46	9	19.56521739							4	2	2	1	NA	NA	NA	unphased	0.790588235	0.790588235	1	0	0.02	0.98	0	0	0	0	3	7.27E-06	1	1.82E-12	1	YES	somatic	1_1
1353824	PD9772b	1215865705	1	204159889	C	T	KISS1	CCDS41454.1	r.289g>a	c.140G>A	p.G47E	missense	40	0	0	10	4	40	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.976470588	1.976470588	1	0	0	1	0	0	0	0	3	1.28E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215865742	1	204465160	C	T	PIK3C2B	ENST00000415899	r.?	-	-	upstream	32	0	0	32	8	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.0075	0.9925	0	0	0	0	3	3.69E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215865933	1	206261695	G	T	C1orf186	ENST00000331555	r.?	-	-	intronic	34	0	0	62	9	14.51612903	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.717267552	0.717267552	1	0.00125	0.03625	0.9625	0	0	0	0	3	3.12E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215866588	1	211390871	C	T	-	-	-	-	-	-	53	0	0	58	13	22.4137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.107505071	1.107505071	1	0	0	1	0	0	0	0	3	3.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215866668	1	211810293	A	T	-	-	-	-	-	-	29	1	3.448275862	32	6	18.75	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.113970588	1.113970588	1	0	0.00625	0.99375	0	0	0	0	3	1.27E-08	0.135292269	1	1	NA	NA	NA
1353824	PD9772b	1215866752	1	212192917	C	T	INTS7	CCDS1501.1	r.?	-	-	intronic	43	0	0	90	26	28.88888889	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.716339869	0.858169935	2	0	0.0025	0.9975	0	0	0	0	3	3.18E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215866841	1	212723091	G	T	-	-	-	-	-	-	37	0	0	62	6	9.677419355	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.574952562	0.574952562	1	0.00125	0.08375	0.915	0	0	0	0	3	7.56E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215866942	1	213097974	C	T	-	-	-	-	-	-	31	0	0	58	13	22.4137931	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.331643002	1.331643002	1	0	0.00125	0.99875	0	0	0	0	3	3.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215867434	1	216296645	G	T	USH2A	CCDS31025.1	r.?	-	-	intronic	47	0	0	100	36	36	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.138823529	1.069411765	2	0	0	1	0	0	0	0	3	2.11E-56	1	1	1	NA	NA	NA
1353824	PD9772b	1215868020	1	219772701	G	T	-	-	-	-	-	-	28	0	0	79	10	12.65822785	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.752047655	0.752047655	1	0.00125	0.0175	0.98125	0	0	0	0	3	1.03E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215868183	1	220609488	G	T	-	-	-	-	-	-	34	0	0	101	18	17.82178218	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	9.60E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215868664	1	223645593	C	T	-	-	-	-	-	-	36	0	0	58	22	37.93103448	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.253549696	1.126774848	2	0	0	1	0	0	0	0	3	1.13E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215868966	1	225186082	C	T	DNAH14	CCDS44321.1	r.?	-	-	intronic	35	0	0	81	12	14.81481481	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.880174292	0.880174292	1	0	0.0075	0.9925	0	0	0	0	3	1.26E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215869012	1	225554689	G	T	DNAH14	CCDS44321.1	r.?	-	-	intronic	30	0	0	86	13	15.11627907	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.898084815	0.898084815	1	0	0.005	0.995	0	0	0	0	3	7.57E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215869167	1	226460011	C	T	LIN9	CCDS1553.1	r.?	-	-	intronic	33	0	0	53	11	20.75471698	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.233074362	1.233074362	1	0	0.0025	0.9975	0	0	0	0	3	3.07E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215869440	1	227994678	C	T	-	-	-	-	-	-	45	0	0	49	22	44.89795918	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	3.116446579	1.038815526	3	0	0	1	0	0	0	0	3	1.04E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1215870154	1	232048839	A	T	DISC1	ENST00000439617	r.?	-	-	intronic	33	0	0	88	32	36.36363636	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.524064171	0.841354724	3	0	0	1	0	0	0	0	3	1.76E-50	1	1	1	NA	NA	NA
1353824	PD9772b	1215870595	1	234754228	C	T	-	-	-	-	-	-	21	0	0	102	28	27.45098039	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	1.630911188	0.815455594	2	0	0.0025	0.9975	0	0	0	0	3	2.48E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1215870835	1	236018347	G	T	LYST	CCDS31062.1	r.?	-	-	intronic	28	0	0	92	32	34.7826087	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	2.066496164	1.033248082	2	0	0	1	0	0	0	0	3	9.88E-50	1	1	1	NA	NA	NA
1353824	PD9772b	1215871130	1	237276082	C	T	RYR2	ENST00000366574	r.?	-	-	intronic	30	0	0	91	40	43.95604396	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	2.611506141	0.870502047	3	0	0	1	0	0	0	0	3	7.57E-67	1	1	1	NA	NA	NA
1353824	PD9772b	1215871145	1	237354585	C	T	RYR2	ENST00000366574	r.?	-	-	intronic	31	0	0	87	28	32.18390805	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	1.912102772	0.956051386	2	0	0	1	0	0	0	0	3	1.40E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1215871201	1	237657583	C	T	RYR2	ENST00000366574	r.?	-	-	intronic	35	0	0	68	12	17.64705882	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	1.048442907	1.048442907	1	0	0.0025	0.9975	0	0	0	0	3	1.37E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215871503	1	238955620	G	T	-	-	-	-	-	-	31	0	0	117	56	47.86324786	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	3.322272499	1.107424166	3	0	0	1	0	0	0	0	3	1.13E-95	1	1	1	NA	NA	NA
1353824	PD9772b	1215871677	1	239749035	A	T	-	-	-	-	-	-	27	0	0	124	18	14.51612903	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.007590133	1.007590133	1	0	0.0025	0.9975	0	0	0	0	3	4.73E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215871737	1	239925482	C	T	CHRM3	CCDS1616.1	r.?	-	-	intronic	32	0	0	100	13	13	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.902352941	0.902352941	1	0	0.0075	0.9925	0	0	0	0	3	5.79E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215871848	1	240297742	A	T	FMN2	CCDS31069.2	r.?	-	-	intronic	43	0	0	137	14	10.2189781	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	1.015886647	1.015886647	1	0	0.0025	0.9975	0	0	0	0	3	1.63E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215872139	1	241033215	G	T	RGS7	CCDS31071.1	r.?	-	-	intronic	38	0	0	122	15	12.29508197	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	1.222275796	1.222275796	1	0	0	1	0	0	0	0	3	1.14E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215872437	1	241910792	G	T	WDR64	ENST00000366552	r.?	-	-	intronic	30	0	0	192	25	13.02083333	0	0	NA	0	0	NA							9	7	2	1	NA	NA	NA	unphased	1.29442402	1.29442402	1	0	0	1	0	0	0	0	3	2.03E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215872553	1	242161081	A	T	MAP1LC3C	CCDS31074.1	r.?	-	-	intronic	41	0	0	117	34	29.05982906	286	1	0.34965035	72	26	36.11111111							9	7	2	1	NA	NA	NA	unphased	2.888888889	0.962962963	3	0	0	1	0	0	0	0	3	1.32E-49	1	3.29E-41	0.761547932	YES	somatic	1_1
1353824	PD9772b	1215872878	1	242878753	C	T	-	-	-	-	-	-	35	0	0	94	41	43.61702128	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	3.027534418	1.009178139	3	0	0	1	0	0	0	0	3	2.67E-68	1	1	1	NA	NA	NA
1353824	PD9772b	1215873122	1	244130079	C	T	-	-	-	-	-	-	26	0	0	87	8	9.195402299	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.638269101	0.638269101	1	0.00125	0.05625	0.9425	0	0	0	0	3	1.61E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215873316	1	245012566	G	T	HNRNPU	CCDS31081.1	r.?	-	-	downstream	24	0	0	120	17	14.16666667	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.983333333	0.983333333	1	0	0	1	0	0	0	0	3	8.90E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215873334	1	245100486	G	T	-	-	-	-	-	-	37	0	0	99	6	6.060606061	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.420677362	0.420677362	1	0.03875	0.34375	0.6175	0	0	0	0	3	1.18E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215873578	1	246127808	C	T	SMYD3	CCDS31083.1	r.?	-	-	intronic	51	0	0	91	7	7.692307692	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.533936652	0.533936652	1	0.0125	0.15	0.8375	0	0	0	0	3	4.38E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215873619	1	246211606	C	T	SMYD3	CCDS31083.1	r.?	-	-	intronic	45	0	0	111	45	40.54054054	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.813990461	0.93799682	3	0	0.00125	0.99875	0	0	0	0	3	5.57E-73	1	1	1	NA	NA	NA
1353824	PD9772b	1215873973	1	247571164	G	T	-	-	-	-	-	-	51	0	0	86	30	34.88372093	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.421340629	0.807113543	3	0	0	1	0	0	0	0	3	9.12E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1215873974	1	247571165	G	T	-	-	-	-	-	-	55	0	0	87	30	34.48275862	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.393509128	1.196754564	2	0	0	1	0	0	0	0	3	1.39E-46	1	1	1	NA	NA	NA
1353824	PD9772b	1215874007	1	247723125	C	T	C1orf150	CCDS1635.1	r.?	-	-	intronic	27	0	0	103	47	45.63106796	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	3.167332953	1.055777651	3	0	0	1	0	0	0	0	3	2.91E-79	1	1	1	NA	NA	NA
1353824	PD9772b	1215874328	1	248833355	A	T	-	-	-	-	-	-	38	0	0	105	27	25.71428571	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.78487395	0.892436975	2	0	0.00125	0.99875	0	0	0	0	3	4.48E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215874588	10	1053049	C	T	GTPBP4	CCDS31132.1	r.1176c>u	c.1094C>T	p.P365L	missense	36	0	0	22	8	36.36363636	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.796791444	1.796791444	1	0	0.00125	0.99875	0	0	0	0	3	1.17E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215874962	10	3544509	G	T	-	-	-	-	-	-	29	0	0	79	20	25.3164557	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.250930752	1.250930752	1	0	0	1	0	0	0	0	3	1.91E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215874980	10	3691774	C	T	-	-	-	-	-	-	31	0	0	69	11	15.94202899	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.787723785	0.787723785	1	0	0.01	0.99	0	0	0	0	3	6.82E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215875459	10	6831441	C	T	-	-	-	-	-	-	42	0	0	78	13	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01	0.99	0	0	0	0	3	1.99E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215876043	10	10491845	G	T	-	-	-	-	-	-	27	0	0	68	14	20.58823529	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.017301038	1.017301038	1	0	0.00375	0.99625	0	0	0	0	3	5.84E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215876066	10	10723603	G	T	-	-	-	-	-	-	33	0	0	104	18	17.30769231	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.85520362	0.85520362	1	0	0.005	0.995	0	0	0	0	3	1.68E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215876183	10	11508164	G	T	USP6NL	CCDS44357.1	r.?	-	-	intronic	42	0	0	89	14	15.73033708	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.777263714	0.777263714	1	0	0.01125	0.98875	0	0	0	0	3	3.28E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215876707	10	14998951	A	T	DCLRE1C	CCDS7105.1	r.?	-	-	upstream	25	0	0	70	16	22.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.129411765	1.129411765	1	0	0.0025	0.9975	0	0	0	0	3	2.93E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215876762	10	15358478	C	T	FAM171A1	CCDS31154.1	r.?	-	-	intronic	42	0	0	50	7	14	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.691764706	0.691764706	1	0	0.03875	0.96125	0	0	0	0	3	6.46E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215876868	10	16046715	A	T	-	-	-	-	-	-	40	0	0	80	14	17.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.864705882	0.864705882	1	0	0.00875	0.99125	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215876960	10	16646542	C	T	RSU1	CCDS7112.1	r.?	-	-	intronic	38	0	0	14	8	57.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.823529412	1.411764706	2	0	0.00125	0.99875	0	0	0	0	3	1.14E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215877238	10	18757598	A	T	CACNB2	CCDS7128.1	r.?	-	-	intronic	23	0	0	54	10	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.005	0.995	0	0	0	0	3	1.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215877680	10	21593045	C	T	-	-	-	-	-	-	27	0	0	50	11	22	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.087058824	1.087058824	1	0	0.0025	0.9975	0	0	0	0	3	1.52E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215877732	10	21881567	A	T	MLLT10	CCDS7135.1	r.?	-	-	intronic	34	0	0	12	3	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0.00125	0.01375	0.985	0	0	0	0	3	2.66E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215877788	10	22342532	C	T	-	-	-	-	-	-	27	0	0	72	15	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.00125	0.99875	0	0	0	0	3	2.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215877887	10	23408292	C	T	MSRB2	CCDS41495.1	r.459c>u	c.356C>T	p.T119M	missense	41	0	0	37	7	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.0125	0.9875	0	0	0	0	3	7.05E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215877930	10	23814479	A	T	-	-	-	-	-	-	31	0	0	92	19	20.65217391	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.020460358	1.020460358	1	0	0	1	0	0	0	0	3	3.08E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215878535	10	27651890	G	T	-	-	-	-	-	-	28	0	0	77	20	25.97402597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.28342246	1.28342246	1	0	0.00125	0.99875	0	0	0	0	3	1.07E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215878629	10	28204984	A	T	ARMC4	CCDS7157.1	r.?	-	-	intronic	32	0	0	84	12	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0	0.03	0.97	0	0	0	0	3	1.98E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215878855	10	29671223	G	T	-	-	-	-	-	-	32	0	0	53	11	20.75471698	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.025527192	1.025527192	1	0	0	1	0	0	0	0	3	3.07E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215878962	10	30338134	C	T	KIAA1462	CCDS41500.1	r.?	-	-	intronic	26	0	0	27	8	29.62962963	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.464052288	1.464052288	1	0	0.00375	0.99625	0	0	0	0	3	7.97E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215878983	10	30460490	G	T	AL160060.2	ENST00000502624	r.?	-	-	intronic	35	0	0	80	17	21.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.05	1.05	1	0	0	1	0	0	0	0	3	5.75E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215878996	10	30531080	C	T	AL160060.2	ENST00000502624	r.?	-	-	intronic	36	0	0	30	6	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0.00125	0.00375	0.995	0	0	0	0	3	8.37E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215879141	10	31428159	C	T	-	-	-	-	-	-	25	0	0	72	12	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.005	0.995	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215879292	10	32639087	C	T	EPC1	CCDS7172.1	r.?	-	-	upstream	29	0	0	49	8	16.32653061	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.806722689	0.806722689	1	0.00125	0.0175	0.98125	0	0	0	0	3	1.47E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215879704	10	35748127	A	T	CCNY	CCDS7189.1	r.?	-	-	intronic	39	0	0	43	8	18.60465116	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.919288646	0.919288646	1	0.00125	0.0075	0.99125	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215879765	10	36137115	A	T	-	-	-	-	-	-	30	0	0	54	9	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0.00125	0.01125	0.9875	0	0	0	0	3	8.48E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215880225	10	38798217	G	T	ENSG00000224624	ENST00000421356	r.?	-	-	downstream	46	0	0	85	12	14.11764706	0	0	NA	0	0	NA							4.426998142	2	2	0.573001858	3	2	0.426998142	unphased	0.757859945	0.757859945	1	0	0.015	0.985	0	0	0	0	3	2.29E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215884490	10	45074457	G	T	-	-	-	-	-	-	36	0	0	38	13	34.21052632	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.348297214	1.348297214	1	0	0.0025	0.9975	0	0	0	0	3	5.88E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215884865	10	50198513	G	T	-	-	-	-	-	-	21	0	0	42	12	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0.0025	0.9975	0	0	0	0	3	2.35E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215884923	10	50938671	G	T	OGDHL	CCDS7234.1	r.?	-	-	downstream	33	0	0	56	14	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00375	0.99625	0	0	0	0	3	2.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215884925	10	50993916	G	T	-	-	-	-	-	-	20	0	0	55	14	25.45454545	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.003208556	1.003208556	1	0	0.00125	0.99875	0	0	0	0	3	2.19E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215885044	10	52887229	C	T	PRKG1	CCDS7244.1	r.?	-	-	intronic	31	0	0	48	13	27.08333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.067401961	1.067401961	1	0	0.00125	0.99875	0	0	0	0	3	2.00E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215885108	10	53620556	A	T	PRKG1	CCDS7244.1	r.?	-	-	intronic	41	0	0	69	21	30.43478261	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.199488491	1.199488491	1	0	0	1	0	0	0	0	3	1.02E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215885169	10	54141238	C	T	-	-	-	-	-	-	41	0	0	50	15	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0	1	0	0	0	0	3	5.83E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215885306	10	55393500	A	T	-	-	-	-	-	-	33	0	0	54	13	24.07407407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.948801743	0.948801743	1	0	0	1	0	0	0	0	3	1.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215885498	10	57038817	A	T	PCDH15	ENST00000373957	r.?	-	-	intronic	49	0	0	66	15	22.72727273	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.895721925	0.895721925	1	0	0	1	0	0	0	0	3	6.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215885502	10	57134980	G	T	PCDH15	ENST00000373957	r.?	-	-	intronic	52	0	0	44	11	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	3.22E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215885549	10	57468478	C	T	-	-	-	-	-	-	39	0	0	53	18	33.96226415	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.338512764	1.338512764	1	0	0	1	0	0	0	0	3	2.09E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215885833	10	59868823	C	T	-	-	-	-	-	-	44	0	0	40	10	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	7.22E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215886812	10	67932761	G	T	CTNNA3	CCDS7269.1	r.?	-	-	intronic	30	0	0	96	19	19.79166667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.977941176	0.977941176	1	0	0.0025	0.9975	0	0	0	0	3	7.42E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215886867	10	68307349	C	T	CTNNA3	CCDS7269.1	r.?	-	-	intronic	44	0	0	41	12	29.26829268	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.446197991	1.446197991	1	0	0	1	0	0	0	0	3	1.69E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215886899	10	68504676	A	T	CTNNA3	CCDS7269.1	r.?	-	-	intronic	31	0	0	75	10	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0.00375	0.05875	0.9375	0	0	0	0	3	6.02E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215886925	10	68763215	C	T	LRRTM3	CCDS7270.1	r.?	-	-	intronic	28	0	0	71	10	14.08450704	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.695940348	0.695940348	1	0	0.03375	0.96625	0	0	0	0	3	3.42E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215886976	10	69217355	A	T	CTNNA3	CCDS7269.1	r.?	-	-	intronic	45	0	0	76	15	19.73684211	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0	1	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215887032	10	69601230	C	T	DNAJC12	CCDS7271.1	r.?	-	-	upstream	39	0	0	84	21	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	1.15E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215888025	10	77517168	C	T	C10orf11	ENST00000354343	r.?	-	-	intronic	37	0	0	67	15	22.3880597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.106233538	1.106233538	1	0	0.00125	0.99875	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215888662	10	82756614	G	T	-	-	-	-	-	-	33	0	0	25	7	28	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.383529412	1.383529412	1	0	0.005	0.995	0	0	0	0	3	3.47E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215888991	10	85480907	C	T	-	-	-	-	-	-	27	0	0	54	12	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.0025	0.9975	0	0	0	0	3	6.90E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215889183	10	86769865	G	T	-	-	-	-	-	-	30	0	0	72	10	13.88888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.68627451	0.68627451	1	0	0.03125	0.96875	0	0	0	0	3	3.95E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215889285	10	87706647	A	T	GRID1	CCDS31236.1	r.?	-	-	intronic	41	0	0	15	4	26.66666667	218	0	0	92	11	11.95652174							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0	0.00875	0.99125	0	0	0	0	3	8.16E-07	1	1.81E-12	1	YES	somatic	1_1
1353824	PD9772b	1215889488	10	89259673	A	T	MINPP1	CCDS7384.1	r.?	-	-	upstream	33	0	0	36	7	19.44444444	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.960784314	0.960784314	1	0	0.00875	0.99125	0	0	0	0	3	5.74E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215889594	10	90309935	A	T	RNLS	CCDS7388.1	r.?	-	-	intronic	34	0	0	91	20	21.97802198	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.085972851	1.085972851	1	0	0.00125	0.99875	0	0	0	0	3	4.44E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215889610	10	90429267	A	T	LIPF	CCDS7389.1	r.?	-	-	intronic	38	0	0	89	20	22.47191011	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.110376735	1.110376735	1	0	0	1	0	0	0	0	3	2.72E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215889690	10	91208055	C	T	SLC16A12	CCDS7404.1	r.?	-	-	intronic	37	0	0	92	19	20.65217391	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.020460358	1.020460358	1	0	0	1	0	0	0	0	3	3.08E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215891009	10	101374668	C	T	SLC25A28	CCDS41559.1	r.?	-	-	intronic	41	0	0	55	11	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.0025	0.9975	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215891154	10	102365903	C	T	-	-	-	-	-	-	34	0	0	72	14	19.44444444	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.960784314	0.960784314	1	0	0.00125	0.99875	0	0	0	0	3	1.39E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215892266	10	111244466	A	T	-	-	-	-	-	-	50	0	0	84	17	20.23809524	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1	1	1	0	0.00375	0.99625	0	0	0	0	3	1.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215893362	10	120264568	C	T	-	-	-	-	-	-	42	0	0	82	22	26.82926829	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.325681492	1.325681492	1	0	0	1	0	0	0	0	3	9.09E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215893753	10	123149878	A	T	-	-	-	-	-	-	38	0	0	81	19	23.45679012	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.159041394	1.159041394	1	0	0	1	0	0	0	0	3	2.15E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215893794	10	123392011	G	T	-	-	-	-	-	-	20	0	0	16	3	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.0275	0.9725	0	0	0	0	3	6.67E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215893799	10	123401869	G	T	-	-	-	-	-	-	27	0	0	35	9	25.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.270588235	1.270588235	1	0	0.0025	0.9975	0	0	0	0	3	1.23E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215893875	10	123864599	G	T	TACC2	CCDS7626.1	r.?	-	-	intronic	48	0	0	63	10	15.87301587	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.784313725	0.784313725	1	0	0.02	0.98	0	0	0	0	3	9.81E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215894023	10	125018528	G	T	-	-	-	-	-	-	33	0	0	74	20	27.02702703	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.3354531	1.3354531	1	0	0.00125	0.99875	0	0	0	0	3	4.34E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215894033	10	125107668	C	T	-	-	-	-	-	-	31	0	0	63	17	26.98412698	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.333333333	1.333333333	1	0	0	1	0	0	0	0	3	6.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215894246	10	127163849	C	T	-	-	-	-	-	-	34	0	0	71	14	19.71830986	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.974316487	0.974316487	1	0	0.00375	0.99625	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215894248	10	127164700	A	T	-	-	-	-	-	-	37	0	0	76	11	14.47368421	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.715170279	0.715170279	1	0	0.025	0.975	0	0	0	0	3	2.08E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215894270	10	127334380	A	T	-	-	-	-	-	-	30	0	0	60	10	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01	0.99	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215894798	10	129786378	C	T	PTPRE	CCDS7657.1	r.?	-	-	intronic	24	0	0	32	6	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.00875	0.99125	0	0	0	0	3	1.27E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215894849	10	130186902	C	T	-	-	-	-	-	-	31	0	0	76	14	18.42105263	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.910216718	0.910216718	1	0	0.00625	0.99375	0	0	0	0	3	3.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215894961	10	131253441	G	T	-	-	-	-	-	-	31	0	0	46	8	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.0125	0.9875	0	0	0	0	3	8.61E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215895069	10	132275034	A	T	-	-	-	-	-	-	26	0	0	21	5	23.80952381	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.176470588	1.176470588	1	0	0.00625	0.99375	0	0	0	0	3	5.95E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215895142	10	132841894	G	T	-	-	-	-	-	-	36	0	0	22	5	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0.005	0.995	0	0	0	0	3	7.67E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215895312	10	134764654	C	T	-	-	-	-	-	-	35	0	0	43	8	18.60465116	0	0	NA	0	0	NA							0.102572332	0	0	0.897427668	1	0	0.102572332	unphased	0.194185824	0.194185824	1	0.93625	0.06375	0	0	0	0	0	1	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215895725	11	707751	A	T	EPS8L2	CCDS31328.1	r.?	-	-	intronic	38	0	0	4	4	100	0	0	NA	0	0	NA							0.446583235	0	0	0.553416765	1	0	0.446583235	unphased	1.387759706	1.387759706	1	0	0.00125	0.99875	0	0	0	0	3	6.25E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215895726	11	707752	A	T	EPS8L2	CCDS31328.1	r.?	-	-	intronic	38	0	0	4	4	100	0	0	NA	0	0	NA							0.446583235	0	0	0.553416765	1	0	0.446583235	unphased	1.387759706	1.387759706	1	0	0.0025	0.99625	0	0	0.00125	0	3	6.25E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215896277	11	5886934	A	T	TRIM5	CCDS31392.1	r.?	-	-	intronic	33	0	0	58	16	27.5862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.087221095	1.087221095	1	0	0.00375	0.99625	0	0	0	0	3	1.00E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215896393	11	6769657	C	T	-	-	-	-	-	-	34	0	0	65	10	15.38461538	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.606334842	0.606334842	1	0.00125	0.12625	0.8725	0	0	0	0	3	1.36E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215896752	11	10599738	A	T	MRVI1	CCDS44539.1	r.?	-	-	intronic	40	0	0	69	8	11.5942029	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.456947997	0.456947997	1	0.035	0.45125	0.51375	0	0	0	0	3	2.49E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215896999	11	13048887	A	T	-	-	-	-	-	-	33	0	0	42	16	38.0952381	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.50140056	0.75070028	2	0	0.01625	0.98375	0	0	0	0	3	2.25E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215897104	11	14037076	C	T	SPON1	ENST00000310358	r.?	-	-	intronic	46	0	0	71	16	22.53521127	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.888152444	0.888152444	1	0	0.00125	0.99875	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215897219	11	15123696	C	T	-	-	-	-	-	-	33	0	0	77	21	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0	1	0	0	0	0	3	1.46E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215897226	11	15164753	A	T	INSC	CCDS41621.1	r.?	-	-	intronic	41	0	0	60	6	10	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.394117647	0.394117647	1	0.08125	0.52125	0.3975	0	0	0	0	2	6.21E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215897437	11	17253798	C	T	-	-	-	-	-	-	31	0	0	52	11	21.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.833710407	0.833710407	1	0	0.00625	0.99375	0	0	0	0	3	2.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215897803	11	21108071	C	T	NELL1	CCDS7855.1	r.?	-	-	intronic	20	0	0	58	12	20.68965517	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.022312373	1.022312373	1	0	0.005	0.995	0	0	0	0	3	1.76E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215897818	11	21236958	G	T	NELL1	CCDS7855.1	r.?	-	-	intronic	28	0	0	80	15	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.00375	0.99625	0	0	0	0	3	1.49E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215898348	11	24573255	A	T	LUZP2	CCDS31446.1	r.?	-	-	intronic	34	0	0	88	22	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	5.27E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215898390	11	24818523	G	T	LUZP2	CCDS31446.1	r.?	-	-	intronic	32	0	0	88	21	23.86363636	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.179144385	1.179144385	1	0	0	1	0	0	0	0	3	3.45E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215898682	11	26406339	G	T	ANO3	CCDS31447.1	r.?	-	-	intronic	41	0	0	74	15	20.27027027	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.001589825	1.001589825	1	0	0	1	0	0	0	0	3	4.22E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215898746	11	26659591	C	T	ANO3	CCDS31447.1	r.?	-	-	intronic	35	0	0	88	14	15.90909091	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.786096257	0.786096257	1	0	0.0125	0.9875	0	0	0	0	3	2.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215898842	11	27220243	A	T	-	-	-	-	-	-	32	0	0	69	13	18.84057971	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.930946292	0.930946292	1	0	0.0025	0.9975	0	0	0	0	3	3.64E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215899127	11	29106415	G	T	-	-	-	-	-	-	36	0	0	60	19	31.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.564705882	0.782352941	2	0	0.00875	0.99125	0	0	0	0	3	3.21E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215899154	11	29328377	C	T	-	-	-	-	-	-	25	0	0	60	9	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.01875	0.98125	0	0	0	0	3	2.29E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215899192	11	29699206	C	T	-	-	-	-	-	-	35	0	0	89	19	21.34831461	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.054857898	1.054857898	1	0	0	1	0	0	0	0	3	1.55E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215899223	11	29954437	G	T	-	-	-	-	-	-	35	0	0	44	6	13.63636364	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.673796791	0.673796791	1	0.00125	0.0225	0.97625	0	0	0	0	3	9.37E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215899354	11	31199412	C	T	ENSG00000226746	ENST00000399333	r.?	-	-	intronic	48	0	0	91	21	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	7.54E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215899470	11	32306587	A	T	-	-	-	-	-	-	30	0	0	60	16	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0	1	0	0	0	0	3	1.86E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215899506	11	32656556	C	T	CCDC73	CCDS41630.1	r.?	-	-	intronic	39	0	0	56	12	21.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.844537815	0.844537815	1	0	0.00625	0.99375	0	0	0	0	3	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215899605	11	33410242	A	T	-	-	-	-	-	-	25	0	0	59	17	28.81355932	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.13559322	1.13559322	1	0	0	1	0	0	0	0	3	1.74E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215899747	11	34819202	G	T	-	-	-	-	-	-	37	0	0	33	12	36.36363636	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.43315508	1.43315508	1	0	0	1	0	0	0	0	3	7.86E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215900176	11	37820865	G	T	-	-	-	-	-	-	35	0	0	73	23	31.50684932	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.871877518	0.935938759	2	0	0	1	0	0	0	0	3	5.33E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215900275	11	38371537	A	T	-	-	-	-	-	-	39	0	0	77	28	36.36363636	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.160427807	1.080213904	2	0	0	1	0	0	0	0	3	2.30E-44	1	1	1	NA	NA	NA
1353824	PD9772b	1215900405	11	39000090	G	T	-	-	-	-	-	-	27	0	0	96	39	40.625	2	0	0	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.413602941	0.804534314	3	0	0.00125	0.99875	0	0	0	0	3	1.65E-63	1	1	1	NA	NA	NA
1353824	PD9772b	1215900426	11	39100615	G	T	-	-	-	-	-	-	30	0	0	59	10	16.94915254	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.006979063	1.006979063	1	0	0.00125	0.99875	0	0	0	0	3	4.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215900682	11	40372207	C	T	-	-	-	-	-	-	40	0	0	109	26	23.85321101	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.41716136	0.70858068	2	0	0.03625	0.96375	0	0	0	0	3	9.06E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215900993	11	42232983	A	T	-	-	-	-	-	-	21	0	0	76	26	34.21052632	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.03250774	1.01625387	2	0	0	1	0	0	0	0	3	1.80E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1215901063	11	42630681	C	T	-	-	-	-	-	-	31	0	0	67	24	35.82089552	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.128182616	1.064091308	2	0	0	1	0	0	0	0	3	4.72E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1215901128	11	43148898	A	T	-	-	-	-	-	-	29	0	0	87	19	21.83908046	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.079107505	1.079107505	1	0	0	1	0	0	0	0	3	9.64E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215901422	11	45674799	G	T	CHST1	CCDS7913.1	r.?	-	-	intronic	40	0	0	50	9	18	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.889411765	0.889411765	1	0	0.00625	0.99375	0	0	0	0	3	4.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215903070	11	51466093	A	T	-	-	-	-	-	-	39	0	0	70	17	24.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.2	1.2	1	0	0	1	0	0	0	0	3	4.68E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215903509	11	55220270	A	T	-	-	-	-	-	-	34	0	0	57	8	14.03508772	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.693498452	0.693498452	1	0.00125	0.03625	0.9625	0	0	0	0	3	5.19E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215903606	11	55885111	C	T	OR8H3	CCDS31519.1	r.?	-	-	upstream	33	0	0	58	14	24.13793103	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.192697769	1.192697769	1	0	0.00125	0.99875	0	0	0	0	3	5.04E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215903771	11	56990550	G	T	-	-	-	-	-	-	30	0	0	86	11	12.79069767	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.632010944	0.632010944	1	0	0.07625	0.92375	0	0	0	0	3	8.47E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215903945	11	58128234	A	T	OR5B17	CCDS31548.1	r.?	-	-	upstream	48	0	0	81	25	30.86419753	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.525054466	0.762527233	2	0	0.01125	0.98875	0	0	0	0	3	1.20E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1215903949	11	58162088	G	T	-	-	-	-	-	-	37	0	0	77	18	23.37662338	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.155080214	1.155080214	1	0	0.00125	0.99875	0	0	0	0	3	4.71E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215904125	11	59582131	A	T	MRPL16	CCDS7976.1	r.?	-	-	upstream	30	0	0	86	18	20.93023256	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.034199726	1.034199726	1	0	0	1	0	0	0	0	3	4.22E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215904471	11	62448486	C	T	UBXN1	CCDS8029.1	r.?	-	-	upstream	34	0	0	43	9	20.93023256	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.034199726	1.034199726	1	0	0.005	0.995	0	0	0	0	3	9.45E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215904498	11	62703849	A	T	-	-	-	-	-	-	32	0	0	39	7	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.0175	0.9825	0	0	0	0	3	1.04E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215904538	11	63010778	G	T	-	-	-	-	-	-	27	0	0	33	9	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0.0025	0.9975	0	0	0	0	3	6.76E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215904742	11	65336461	C	T	FAM89B	CCDS44648.1	r.?	-	-	upstream	36	0	0	54	11	20.37037037	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.006535948	1.006535948	1	0	0.0025	0.9975	0	0	0	0	3	3.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215904972	11	67590751	A	T	-	-	-	-	-	-	34	0	0	53	8	15.09433962	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.745837958	0.745837958	1	0	0.01875	0.98125	0	0	0	0	3	2.83E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215905082	11	68046500	A	T	-	-	-	-	-	-	46	0	0	40	7	17.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.864705882	0.864705882	1	0	0.02125	0.97875	0	0	0	0	3	1.26E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215905578	11	72288911	G	T	PDE2A	CCDS8216.1	r.?	-	-	intronic	22	0	0	23	3	13.04347826	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.644501279	0.644501279	1	0.005	0.05375	0.94125	0	0	0	0	3	0.000205387	1	1	1	NA	NA	NA
1353824	PD9772b	1215905727	11	73788696	A	T	C2CD3	CCDS31636.1	r.?	-	-	intronic	22	0	0	63	18	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0	1	0	0	0	0	3	7.98E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215905939	11	75363255	A	T	MAP6	CCDS44686.1	r.?	-	-	intronic	35	0	0	67	14	20.89552239	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.032484636	1.032484636	1	0	0	1	0	0	0	0	3	4.66E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215906011	11	75971672	G	T	-	-	-	-	-	-	39	0	0	28	6	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0.00125	0.01125	0.9875	0	0	0	0	3	5.36E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215906053	11	76296481	C	T	-	-	-	-	-	-	38	0	0	81	19	23.45679012	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.159041394	1.159041394	1	0	0	1	0	0	0	0	3	2.15E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215906399	11	79025842	G	T	ODZ4	CCDS44688.1	r.?	-	-	intronic	36	0	0	69	14	20.28985507	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.002557545	1.002557545	1	0	0.005	0.995	0	0	0	0	3	7.30E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215906587	11	80503520	G	T	-	-	-	-	-	-	28	0	0	100	21	21	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.037647059	1.037647059	1	0	0.00125	0.99875	0	0	0	0	3	6.67E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215906615	11	80740146	C	T	-	-	-	-	-	-	33	0	0	84	17	20.23809524	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1	1	1	0	0.00125	0.99875	0	0	0	0	3	1.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215906666	11	81210973	G	T	-	-	-	-	-	-	32	0	0	80	19	23.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.173529412	1.173529412	1	0	0	1	0	0	0	0	3	1.65E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215906854	11	82371136	G	T	-	-	-	-	-	-	36	0	0	61	12	19.67213115	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.972034716	0.972034716	1	0	0	1	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215907038	11	83846574	G	T	DLG2	CCDS41696.1	r.?	-	-	intronic	33	0	0	74	19	25.67567568	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	1.268680445	1.268680445	1	0	0	1	0	0	0	0	3	3.14E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215907091	11	84333827	A	T	DLG2	CCDS41696.1	r.?	-	-	intronic	28	0	0	92	10	10.86956522	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.537084399	0.537084399	1	0.01	0.22125	0.76875	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215907204	11	85283330	C	T	DLG2	CCDS44690.1	r.?	-	-	intronic	35	0	0	82	7	8.536585366	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.421807747	0.421807747	1	0.05375	0.5075	0.43875	0	0	0	0	2	2.14E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215907215	11	85469341	G	T	SYTL2	CCDS31649.1	r.?	-	-	upstream	28	0	0	83	10	12.04819277	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.595322466	0.595322466	1	0.00125	0.10125	0.8975	0	0	0	0	3	1.70E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215907397	11	86641101	C	T	-	-	-	-	-	-	51	0	0	86	14	16.27906977	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.804377565	0.804377565	1	0	0.0075	0.9925	0	0	0	0	3	1.98E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215907534	11	87796231	G	T	-	-	-	-	-	-	43	0	0	84	22	26.19047619	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.294117647	1.294117647	1	0	0	1	0	0	0	0	3	1.66E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215908540	11	95061348	C	T	-	-	-	-	-	-	30	0	0	71	11	15.49295775	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.765534383	0.765534383	1	0	0.01875	0.98125	0	0	0	0	3	9.49E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215908857	11	98251052	C	T	-	-	-	-	-	-	31	0	0	55	20	36.36363636	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.43315508	0.71657754	2	0	0.04	0.96	0	0	0	0	3	4.08E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215909329	11	102515013	C	T	-	-	-	-	-	-	36	0	0	27	8	29.62962963	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.167755991	1.167755991	1	0	0.0025	0.9975	0	0	0	0	3	7.97E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215909383	11	102910833	A	T	-	-	-	-	-	-	30	0	0	55	14	25.45454545	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.003208556	1.003208556	1	0	0.00125	0.99875	0	0	0	0	3	2.19E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215909513	11	104244202	G	T	-	-	-	-	-	-	37	0	0	56	10	17.85714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.703781513	0.703781513	1	0.00125	0.0325	0.96625	0	0	0	0	3	2.82E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215909922	11	108115649	G	T	ATM	CCDS31669.1	r.1182g>u	c.797G>T	p.W266L	missense	39	0	0	62	16	25.80645161	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.017077799	1.017077799	1	0	0	1	0	0	0	0	3	3.36E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215909999	11	108734342	A	T	DDX10	CCDS8342.1	r.?	-	-	intronic	44	0	0	57	10	17.54385965	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.691434469	0.691434469	1	0.00125	0.03375	0.965	0	0	0	0	3	3.40E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215910050	11	109365603	C	T	-	-	-	-	-	-	39	0	0	64	13	20.3125	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.800551471	0.800551471	1	0	0.01375	0.98625	0	0	0	0	3	1.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215910200	11	110822235	G	T	-	-	-	-	-	-	27	0	0	68	18	26.47058824	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.043252595	1.043252595	1	0	0	1	0	0	0	0	3	3.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215910637	11	114282862	C	T	RBM7	CCDS8370.1	r.?	-	-	downstream	31	0	0	89	27	30.33707865	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.499008592	0.749504296	2	0	0.01125	0.98875	0	0	0	0	3	2.66E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1215910761	11	114985694	G	T	-	-	-	-	-	-	36	0	0	63	5	7.936507937	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.392156863	0.392156863	1	0.075	0.3675	0.5575	0	0	0	0	3	1.73E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215912520	11	131894566	C	T	OPCML	CCDS8491.1	r.?	-	-	intronic	31	0	0	54	16	29.62962963	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.167755991	1.167755991	1	0	0.00125	0.99875	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215912547	11	132166968	G	T	OPCML	CCDS8491.1	r.?	-	-	intronic	29	0	0	63	14	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.00375	0.99625	0	0	0	0	3	1.81E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215912601	11	132603932	C	T	ENSG00000183715	CCDS8492.1	r.?	-	-	intronic	48	0	0	59	12	20.33898305	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.801595214	0.801595214	1	0	0.00625	0.99375	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215912610	11	132767960	G	T	ENSG00000183715	CCDS8492.1	r.?	-	-	intronic	24	0	0	50	13	26	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.024705882	1.024705882	1	0	0.00125	0.99875	0	0	0	0	3	3.65E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215913058	12	1135279	G	T	ERC1	CCDS8508.1	r.?	-	-	intronic	34	0	0	69	23	33.33333333	0	0	NA	0	0	NA							4.298380389	3	1	0.701619611	3	2	0.298380389	unphased	1.746518953	1.026386239	1.701619611	0	0	1	0	0	0	0	3	1.15E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215913128	12	1322858	A	T	ERC1	CCDS8508.1	r.?	-	-	intronic	24	0	0	37	7	18.91891892	0	0	NA	0	0	NA							4.298380389	3	1	0.701619611	3	2	0.298380389	unphased	0.991267514	0.991267514	1	0	0.0075	0.9925	0	0	0	0	3	7.05E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215913238	12	1877421	A	T	ADIPOR2	CCDS8511.1	r.?	-	-	intronic	33	0	0	100	8	8	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.395294118	0.395294118	1	0.08375	0.6875	0.22875	0	0	0	0	2	4.83E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215913352	12	2647804	C	T	CACNA1C	CCDS44794.1	r.?	-	-	intronic	35	0	0	68	11	16.17647059	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.799307958	0.799307958	1	0	0.01625	0.98375	0	0	0	0	3	5.76E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215913466	12	3167621	G	T	-	-	-	-	-	-	32	0	0	29	4	13.79310345	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.681541582	0.681541582	1	0.0025	0.035	0.9625	0	0	0	0	3	1.34E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215913529	12	3572135	G	T	-	-	-	-	-	-	39	0	0	105	17	16.19047619	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.8	0.8	1	0	0.00375	0.99625	0	0	0	0	3	8.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215913635	12	4121432	A	T	-	-	-	-	-	-	31	0	0	110	12	10.90909091	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.539037433	0.539037433	1	0.0075	0.32375	0.66875	0	0	0	0	3	5.46E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215913814	12	4953639	G	T	KCNA6	CCDS8534.1	r.?	-	-	intronic	29	0	0	115	12	10.43478261	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.515601023	0.515601023	1	0.01625	0.405	0.57875	0	0	0	0	3	9.35E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215913900	12	5458123	G	T	-	-	-	-	-	-	29	0	0	91	16	17.58241758	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.868778281	0.868778281	1	0	0.00375	0.99625	0	0	0	0	3	2.79E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215913905	12	5489029	C	T	-	-	-	-	-	-	33	0	0	19	5	26.31578947	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.300309598	1.300309598	1	0	0.00875	0.99125	0	0	0	0	3	3.43E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215913950	12	5767469	G	T	ANO2	CCDS44807.1	r.?	-	-	intronic	44	0	0	108	23	21.2962963	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.052287582	1.052287582	1	0	0	1	0	0	0	0	3	1.44E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215914082	12	6216834	A	T	VWF	CCDS8539.1	r.?	-	-	intronic	39	0	0	66	10	15.15151515	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.748663102	0.748663102	1	0.0025	0.01875	0.97875	0	0	0	0	3	1.60E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215914113	12	6498020	G	T	LTBR	CCDS8544.1	r.?	-	-	intronic	28	0	0	37	5	13.51351351	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.66772655	0.66772655	1	0.0025	0.04125	0.95625	0	0	0	0	3	1.19E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215914114	12	6498021	A	T	LTBR	CCDS8544.1	r.?	-	-	intronic	26	0	0	40	6	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.0425	0.9575	0	0	0	0	3	5.18E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215914119	12	6508566	C	T	-	-	-	-	-	-	29	0	0	57	10	17.54385965	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.866873065	0.866873065	1	0	0.01375	0.98625	0	0	0	0	3	3.40E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215914480	12	8174839	G	T	-	-	-	-	-	-	31	0	0	65	9	13.84615385	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.961085973	0.961085973	1	0	0.0025	0.9975	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215914604	12	8552211	G	T	-	-	-	-	-	-	30	0	0	37	6	16.21621622	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.125596184	1.125596184	1	0	0.01	0.99	0	0	0	0	3	3.18E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215914988	12	10350668	C	T	-	-	-	-	-	-	24	0	0	69	8	11.5942029	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.804774084	0.804774084	1	0	0.025	0.975	0	0	0	0	3	2.49E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215915026	12	10469440	G	T	KLRD1	CCDS8621.1	r.2848g>u	c.?	p.?	3'UTR variant	35	0	0	129	30	23.25581395	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.614227086	0.807113543	2	0	0.0025	0.9975	0	0	0	0	3	1.16E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1215915082	12	10686044	C	T	-	-	-	-	-	-	45	0	0	130	15	11.53846154	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.800904977	0.800904977	1	0	0.00125	0.99875	0	0	0	0	3	3.01E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215915500	12	11658485	C	T	-	-	-	-	-	-	31	0	0	127	23	18.11023622	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.257063455	1.257063455	1	0	0	1	0	0	0	0	3	8.19E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215916015	12	13608569	G	T	-	-	-	-	-	-	49	0	0	125	40	32	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	2.221176471	1.110588235	2	0	0	1	0	0	0	0	3	4.92E-60	1	1	1	NA	NA	NA
1353824	PD9772b	1215916050	12	13872032	A	T	GRIN2B	CCDS8662.1	r.?	-	-	intronic	28	0	0	92	10	10.86956522	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.754475703	0.754475703	1	0	0.0175	0.9825	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215916410	12	15458634	C	T	-	-	-	-	-	-	40	0	0	119	16	13.44537815	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.933267425	0.933267425	1	0	0.00375	0.99625	0	0	0	0	3	2.53E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215916430	12	15595779	A	T	PTPRO	CCDS8675.1	r.?	-	-	intronic	22	0	0	141	34	24.11347518	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.673758865	0.836879433	2	0	0	1	0	0	0	0	3	1.81E-46	1	1	1	NA	NA	NA
1353824	PD9772b	1215916520	12	16205178	C	T	-	-	-	-	-	-	30	0	0	68	12	17.64705882	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.224913495	1.224913495	1	0	0.00125	0.99875	0	0	0	0	3	1.37E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215916698	12	17016269	G	T	-	-	-	-	-	-	39	0	0	100	15	15	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	1.041176471	1.041176471	1	0	0	1	0	0	0	0	3	5.19E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215916706	12	17083097	A	T	-	-	-	-	-	-	42	0	0	103	10	9.708737864	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.673900628	0.673900628	1	0	0.03375	0.96625	0	0	0	0	3	1.51E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215916994	12	18798555	A	T	PIK3C2G	CCDS44839.1	r.?	-	-	intronic	29	0	0	87	9	10.34482759	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.718052738	0.718052738	1	0.00125	0.02625	0.9725	0	0	0	0	3	7.05E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215917198	12	19623208	C	T	AEBP2	CCDS44842.1	r.?	-	-	intronic	35	0	0	96	10	10.41666667	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.723039216	0.723039216	1	0	0.03375	0.96625	0	0	0	0	3	7.45E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215917721	12	21553858	G	T	SLCO1A2	ENST00000453443	r.?	-	-	intronic	32	0	0	86	9	10.46511628	0	0	NA	0	0	NA							6	4	2	1	NA	NA	NA	unphased	0.726402189	0.726402189	1	0.00125	0.03125	0.9675	0	0	0	0	3	6.35E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215918144	12	23425775	A	T	-	-	-	-	-	-	30	0	0	77	14	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.0025	0.9975	0	0	0	0	3	3.82E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215918520	12	26070124	G	T	-	-	-	-	-	-	39	0	0	28	4	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.0425	0.95625	0	0	0	0	3	1.16E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215918542	12	26203836	G	T	RASSF8	CCDS8705.1	r.?	-	-	intronic	37	0	0	79	17	21.51898734	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.063291139	1.063291139	1	0	0	1	0	0	0	0	3	4.55E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215918771	12	27640628	A	T	C12orf70	CCDS44852.1	r.?	-	-	intronic	37	0	0	75	19	25.33333333	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.505098039	0.75254902	2	0	0.0125	0.9875	0	0	0	0	3	4.19E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215918981	12	29033433	G	T	-	-	-	-	-	-	36	0	0	62	12	19.35483871	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.956356736	0.956356736	1	0	0.00125	0.99875	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215919097	12	29920072	C	T	TMTC1	CCDS8718.1	r.?	-	-	intronic	28	0	0	64	12	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.00375	0.99625	0	0	0	0	3	6.30E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215919144	12	30220784	C	T	-	-	-	-	-	-	33	0	0	88	19	21.59090909	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06684492	1.06684492	1	0	0.00125	0.99875	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215919149	12	30281022	C	T	-	-	-	-	-	-	29	0	0	55	12	21.81818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.078074866	1.078074866	1	0	0.00375	0.99625	0	0	0	0	3	8.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215919158	12	30365814	G	T	-	-	-	-	-	-	33	0	0	69	20	28.98550725	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.432225064	0.716112532	2	0	0.02	0.98	0	0	0	0	3	8.73E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215921164	12	38857990	C	T	-	-	-	-	-	-	36	0	0	54	17	31.48148148	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.555555556	0.777777778	2	0	0.0125	0.9875	0	0	0	0	3	3.02E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215921321	12	40291884	G	T	SLC2A13	CCDS8736.2	r.?	-	-	intronic	52	0	0	71	19	26.76056338	0	0	NA	0	0	NA							3.063696442	2	1	0.936303558	2	2	0.063696442	unphased	1.071726554	1.071726554	1	0	0	1	0	0	0	0	3	1.29E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215921516	12	41830406	C	T	PDZRN4	CCDS8739.1	r.?	-	-	upstream	40	0	0	60	17	28.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.4	1.4	1	0	0	1	0	0	0	0	3	2.41E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215921691	12	43384887	G	T	-	-	-	-	-	-	33	0	0	63	17	26.98412698	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.063492063	1.063492063	1	0	0	1	0	0	0	0	3	6.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215921752	12	44016444	C	T	-	-	-	-	-	-	28	0	0	51	10	19.60784314	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.7727797	0.7727797	1	0.00125	0.03	0.96875	0	0	0	0	3	1.04E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215922011	12	46806670	G	T	-	-	-	-	-	-	34	0	0	64	14	21.875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.862132353	0.862132353	1	0	0.0075	0.9925	0	0	0	0	3	2.31E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215922066	12	47265038	C	T	-	-	-	-	-	-	38	0	0	56	22	39.28571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.548319328	0.774159664	2	0	0.005	0.995	0	0	0	0	3	4.34E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215922306	12	49264353	G	T	RND1	CCDS8771.1	r.?	-	-	upstream	39	0	0	25	9	36	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.418823529	1.418823529	1	0	0.00375	0.99625	0	0	0	0	3	3.71E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215922660	12	53281091	G	T	-	-	-	-	-	-	37	0	0	36	8	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0.00125	0.01125	0.9875	0	0	0	0	3	1.04E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215922695	12	53610717	G	T	RARG	CCDS8850.1	r.?	-	-	intronic	25	0	0	13	5	38.46153846	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.515837104	1.515837104	1	0.00125	0.0025	0.99625	0	0	0	0	3	3.89E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215922762	12	54224720	A	T	-	-	-	-	-	-	29	0	0	28	6	21.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.844537815	0.844537815	1	0	0.01125	0.98875	0	0	0	0	3	5.36E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215923547	12	60110527	C	T	SLC16A7	CCDS8961.1	r.?	-	-	intronic	23	0	0	80	20	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	2.53E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215923631	12	60992564	C	T	-	-	-	-	-	-	39	0	0	69	13	18.84057971	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.930946292	0.930946292	1	0	0.00125	0.99875	0	0	0	0	3	3.64E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215923639	12	61104750	G	T	-	-	-	-	-	-	33	0	0	78	24	30.76923077	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.520361991	0.760180995	2	0	0.005	0.995	0	0	0	0	3	3.63E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1215923647	12	61181747	G	T	-	-	-	-	-	-	42	0	0	63	19	30.15873016	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.490196078	0.745098039	2	0	0.0175	0.9825	0	0	0	0	3	9.48E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215923953	12	63646835	A	T	-	-	-	-	-	-	31	0	0	59	16	27.11864407	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.33998006	1.33998006	1	0	0	1	0	0	0	0	3	1.37E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215924001	12	64031444	G	T	ENSG00000177990	CCDS31851.1	r.?	-	-	intronic	30	2	6.666666667	83	10	12.04819277	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.595322466	0.595322466	1	0.00375	0.1275	0.86875	0	0	0	0	3	1.70E-11	0.009909649	1	1	NA	NA	NA
1353824	PD9772b	1215924002	12	64031452	C	T	ENSG00000177990	CCDS31851.1	r.?	-	-	intronic	31	2	6.451612903	85	10	11.76470588	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.581314879	0.581314879	1	0.00125	0.12375	0.875	0	0	0	0	3	2.17E-11	0.010558179	1	1	NA	NA	NA
1353824	PD9772b	1215924008	12	64073430	A	T	-	-	-	-	-	-	35	0	0	89	22	24.71910112	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.221414408	1.221414408	1	0	0	1	0	0	0	0	3	6.96E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215924201	12	65132894	C	T	GNS	CCDS8970.1	r.?	-	-	intronic	23	0	0	73	18	24.65753425	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.21837228	1.21837228	1	0	0	1	0	0	0	0	3	1.62E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215925378	12	73522358	C	T	-	-	-	-	-	-	39	0	0	92	13	14.13043478	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.698209719	0.698209719	1	0	0.03125	0.96875	0	0	0	0	3	1.89E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215925497	12	74317073	G	T	-	-	-	-	-	-	39	0	0	95	11	11.57894737	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.572136223	0.572136223	1	0.00375	0.19	0.80625	0	0	0	0	3	2.59E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215925722	12	76556490	C	T	-	-	-	-	-	-	33	0	0	51	13	25.49019608	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.00461361	1.00461361	1	0	0.00125	0.99875	0	0	0	0	3	4.87E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215925837	12	77842812	G	T	-	-	-	-	-	-	39	0	0	42	8	19.04761905	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.75070028	0.75070028	1	0	0.025	0.975	0	0	0	0	3	3.96E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215925946	12	78684535	C	T	-	-	-	-	-	-	33	0	0	51	12	23.52941176	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.00375	0.99625	0	0	0	0	3	3.24E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215926020	12	79583510	C	T	SYT1	CCDS9017.1	r.?	-	-	intronic	37	0	0	48	12	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00375	0.99625	0	0	0	0	3	1.44E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215926066	12	80138744	C	T	-	-	-	-	-	-	42	0	0	57	13	22.80701754	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.898864809	0.898864809	1	0	0.0075	0.9925	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215926268	12	82639061	C	T	-	-	-	-	-	-	37	0	0	57	13	22.80701754	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.898864809	0.898864809	1	0	0.00125	0.99875	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215926538	12	85320465	A	T	-	-	-	-	-	-	46	0	0	58	19	32.75862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.291075051	1.291075051	1	0	0	1	0	0	0	0	3	1.50E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215926981	12	90148286	C	T	-	-	-	-	-	-	33	0	0	75	16	21.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.054117647	1.054117647	1	0	0	1	0	0	0	0	3	9.88E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215927044	12	90555906	G	T	-	-	-	-	-	-	37	0	0	54	10	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.005	0.995	0	0	0	0	3	1.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215927096	12	90947169	A	T	-	-	-	-	-	-	47	0	0	91	22	24.17582418	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.194570136	1.194570136	1	0	0.00125	0.99875	0	0	0	0	3	1.20E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215927605	12	94785395	C	T	CCDC41	CCDS41820.1	r.?	-	-	intronic	27	0	0	88	17	19.31818182	0	0	NA	2	2	100							5	3	2	1	NA	NA	NA	unphased	1.147727273	1.147727273	1	0	0	1	0	0	0	0	3	3.34E-22	1	2.50E-05	1	NA	NA	NA
1353824	PD9772b	1215927638	12	94970967	A	T	TMCC3	CCDS31877.1	r.?	-	-	intronic	36	0	0	46	14	30.43478261	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.808184143	0.904092072	2	0	0.0025	0.9975	0	0	0	0	3	1.26E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215928001	12	97042529	G	T	C12orf63	CCDS9062.1	r.?	-	-	intronic	27	0	0	22	4	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0.00125	0.015	0.98375	0	0	0	0	3	4.25E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215928064	12	97642160	C	T	-	-	-	-	-	-	41	0	0	81	10	12.34567901	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.610021786	0.610021786	1	0	0.07875	0.92125	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215928075	12	97728807	C	T	-	-	-	-	-	-	42	0	0	82	12	14.63414634	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.723098996	0.723098996	1	0	0.0175	0.9825	0	0	0	0	3	1.46E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215928328	12	99612047	C	T	ANKS1B	ENST00000329257	r.?	-	-	intronic	31	0	0	80	13	16.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.802941176	0.802941176	1	0	0.0075	0.9925	0	0	0	0	3	2.82E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215928676	12	102528344	C	T	C12orf48	CCDS9090.1	r.?	-	-	intronic	35	0	0	88	20	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0	1	0	0	0	0	3	2.12E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215928784	12	103530326	C	T	-	-	-	-	-	-	35	0	0	94	24	25.53191489	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.261576971	1.261576971	1	0	0	1	0	0	0	0	3	6.23E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215929176	12	106266379	G	T	-	-	-	-	-	-	41	0	0	76	14	18.42105263	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.910216718	0.910216718	1	0	0	1	0	0	0	0	3	3.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215929398	12	108077563	C	T	PWP1	CCDS9114.1	r.?	-	-	upstream	25	0	0	56	13	23.21428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.147058824	1.147058824	1	0	0	1	0	0	0	0	3	1.89E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215929493	12	108801603	C	T	-	-	-	-	-	-	31	0	0	82	11	13.41463415	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.662840746	0.662840746	1	0	0.05375	0.94625	0	0	0	0	3	4.94E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215929605	12	109754093	G	T	-	-	-	-	-	-	35	0	0	64	10	15.625	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.772058824	0.772058824	1	0	0.01875	0.98125	0	0	0	0	3	1.16E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215929783	12	110983774	G	T	PPTC7	CCDS9149.1	r.741c>a	c.513C>A	p.H171Q	missense	30	0	0	31	7	22.58064516	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.115749526	1.115749526	1	0	0.005	0.995	0	0	0	0	3	1.85E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215929904	12	112057197	C	T	-	-	-	-	-	-	29	0	0	53	12	22.64150943	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.118756937	1.118756937	1	0	0	1	0	0	0	0	3	5.39E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215930107	12	113529828	G	T	DTX1	CCDS9164.1	r.?	-	-	intronic	37	0	0	39	14	35.8974359	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.773755656	0.886877828	2	0	0.00125	0.99875	0	0	0	0	3	8.19E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215930328	12	115938028	A	T	-	-	-	-	-	-	36	0	0	48	17	35.41666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.395833333	1.395833333	1	0	0	1	0	0	0	0	3	2.80E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215930472	12	117664704	C	T	NOS1	CCDS41842.1	r.?	-	-	intronic	32	0	0	38	12	31.57894737	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.244582043	1.244582043	1	0	0	1	0	0	0	0	3	5.86E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215930504	12	117923381	G	T	KSR2	ENST00000425217	r.?	-	-	intronic	28	0	0	60	17	28.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.116666667	1.116666667	1	0	0	1	0	0	0	0	3	2.41E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215930612	12	118941527	C	T	-	-	-	-	-	-	27	0	0	38	13	34.21052632	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.764290855	0.764290855	1	0	0.025	0.975	0	0	0	0	3	5.88E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215930834	12	120891743	C	T	GATC	CCDS31911.1	r.?	-	-	intronic	28	0	0	79	7	8.860759494	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.197956541	0.6758399	0.292904489	0.00125	0.03875	0.96	0	0	0	0	3	1.65E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215931354	12	126373217	C	T	-	-	-	-	-	-	39	0	0	47	11	23.40425532	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.522870012	0.522870012	1	0.0175	0.515	0.4675	0	0	0	0	2	7.21E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215931496	12	127617130	C	T	-	-	-	-	-	-	31	0	0	93	31	33.33333333	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.744693653	0.744693653	1	0	0.01625	0.98375	0	0	0	0	3	1.54E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1215931506	12	127714427	C	T	-	-	-	-	-	-	24	0	0	52	10	19.23076923	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.429630954	1.466795387	0.292904489	0	0.00125	0.99875	0	0	0	0	3	1.28E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215931523	12	127935385	A	T	-	-	-	-	-	-	34	0	0	57	19	33.33333333	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.744693653	0.744693653	1	0	0.015	0.985	0	0	0	0	3	1.01E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215931681	12	129155573	C	T	TMEM132C	CCDS45009.1	r.?	-	-	intronic	28	0	0	57	13	22.80701754	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.509527236	0.509527236	1	0.01375	0.69875	0.2875	0	0	0	0	2	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215932185	12	133770176	A	T	ZNF268	CCDS45012.1	r.?	-	-	intronic	24	0	0	56	12	21.42857143	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.478731634	0.478731634	1	0.0325	0.74375	0.22375	0	0	0	0	2	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215932186	12	133789205	A	T	-	-	-	-	-	-	23	0	0	43	7	16.27906977	0	0	NA	0	0	NA							1.292904489	1	0	0.707095511	1	1	0.292904489	unphased	0.363687598	1.241659351	0.292904489	0	0.0025	0.9975	0	0	0	0	3	2.15E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215932465	13	19387942	C	T	-	-	-	-	-	-	31	0	0	56	16	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	5.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215933777	13	29375478	G	T	-	-	-	-	-	-	37	0	0	68	15	22.05882353	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.869377163	0.869377163	1	0	0.00375	0.99625	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215933858	13	29979043	C	T	MTUS2	CCDS45022.1	r.?	-	-	intronic	23	0	0	58	16	27.5862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.087221095	1.087221095	1	0	0.00125	0.99875	0	0	0	0	3	1.00E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215934041	13	31801479	A	T	B3GALTL	CCDS9341.1	r.?	-	-	intronic	43	0	0	65	20	30.76923077	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.212669683	1.212669683	1	0	0	1	0	0	0	0	3	2.18E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215934169	13	33037896	G	T	N4BP2L2	CCDS45024.1	r.?	-	-	intronic	25	0	0	42	10	23.80952381	0	0	NA	2	0	0							3	2	1	1	NA	NA	NA	unphased	0.93837535	0.93837535	1	0.00125	0.00375	0.995	0	0	0	0	3	1.24E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215934193	13	33324797	A	T	PDS5B	CCDS41878.1	r.?	-	-	intronic	28	0	0	26	8	30.76923077	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.212669683	1.212669683	1	0	0.00125	0.99875	0	0	0	0	3	5.63E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215934372	13	35340217	G	T	-	-	-	-	-	-	27	0	0	34	11	32.35294118	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.275086505	1.275086505	1	0	0.0025	0.9975	0	0	0	0	3	1.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215934514	13	36634231	C	T	DCLK1	CCDS9354.1	r.?	-	-	intronic	38	0	0	54	10	18.51851852	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.729847495	0.729847495	1	0	0.0225	0.9775	0	0	0	0	3	1.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215934586	13	37543907	G	T	ALG5	CCDS9361.1	r.?	-	-	intronic	24	0	0	41	14	34.14634146	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.345767575	1.345767575	1	0	0	1	0	0	0	0	3	1.90E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215934734	13	38785795	A	T	-	-	-	-	-	-	40	0	0	57	13	22.80701754	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.898864809	0.898864809	1	0	0.00125	0.99875	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215935207	13	43272285	G	T	-	-	-	-	-	-	50	0	0	64	14	21.875	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.862132353	0.862132353	1	0	0.00625	0.99375	0	0	0	0	3	2.31E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215935377	13	44919006	G	T	-	-	-	-	-	-	34	0	0	34	9	26.47058824	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.043252595	1.043252595	1	0	0.00125	0.99875	0	0	0	0	3	9.15E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215935378	13	44919007	C	T	-	-	-	-	-	-	33	0	0	34	9	26.47058824	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.043252595	1.043252595	1	0	0	1	0	0	0	0	3	9.15E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215935854	13	49555399	A	T	FNDC3A	CCDS41886.1	r.?	-	-	intronic	26	0	0	57	16	28.07017544	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.10629515	1.10629515	1	0	0	1	0	0	0	0	3	7.28E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215936075	13	52104202	G	T	-	-	-	-	-	-	26	0	0	56	16	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	5.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215936101	13	52380759	G	T	DHRS12	CCDS9430.1	r.?	-	-	upstream	27	0	0	46	11	23.91304348	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.942455243	0.942455243	1	0	0.0025	0.9975	0	0	0	0	3	5.55E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215936225	13	53840741	G	T	-	-	-	-	-	-	36	0	0	68	15	22.05882353	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.869377163	0.869377163	1	0	0.0025	0.9975	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215936306	13	54726450	C	T	-	-	-	-	-	-	36	0	0	53	16	30.18867925	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.189789123	1.189789123	1	0	0.00125	0.99875	0	0	0	0	3	1.90E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215936426	13	55942653	G	T	-	-	-	-	-	-	35	0	0	59	20	33.89830508	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.335992024	1.335992024	1	0	0	1	0	0	0	0	3	2.21E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215936607	13	57692775	G	T	-	-	-	-	-	-	50	0	0	65	16	24.61538462	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.970135747	0.970135747	1	0	0.00125	0.99875	0	0	0	0	3	7.85E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215936684	13	58308561	G	T	-	-	-	-	-	-	21	0	0	71	18	25.35211268	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.9991715	0.9991715	1	0	0.00125	0.99875	0	0	0	0	3	9.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215936943	13	60827442	C	T	-	-	-	-	-	-	38	0	0	29	8	27.5862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.087221095	1.087221095	1	0	0.0075	0.9925	0	0	0	0	3	1.53E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215936990	13	61155606	C	T	-	-	-	-	-	-	37	0	0	46	9	19.56521739	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.771099744	0.771099744	1	0	0.0125	0.9875	0	0	0	0	3	1.82E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215937143	13	62662394	C	T	-	-	-	-	-	-	29	0	0	76	20	26.31578947	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.037151703	1.037151703	1	0	0	1	0	0	0	0	3	7.96E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215937511	13	64493506	C	T	-	-	-	-	-	-	43	0	0	80	18	22.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.886764706	0.886764706	1	0	0	1	0	0	0	0	3	1.01E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215938142	13	70487205	A	T	KLHL1	CCDS9445.1	r.?	-	-	intronic	32	0	0	25	5	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0.00375	0.0275	0.96875	0	0	0	0	3	1.53E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215939147	13	80549996	C	T	-	-	-	-	-	-	41	0	0	46	15	32.60869565	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.28516624	1.28516624	1	0	0	1	0	0	0	0	3	1.35E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215939220	13	81399306	G	T	-	-	-	-	-	-	38	0	0	60	18	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0	1	0	0	0	0	3	2.89E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215939450	13	83601936	G	T	-	-	-	-	-	-	38	0	0	56	15	26.78571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.055672269	1.055672269	1	0	0.00125	0.99875	0	0	0	0	3	4.09E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215939599	13	85102894	A	T	-	-	-	-	-	-	38	0	0	41	9	21.95121951	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.865136298	0.865136298	1	0	0.00875	0.99125	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215939686	13	86079998	A	T	-	-	-	-	-	-	36	0	0	61	12	19.67213115	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.775313404	0.775313404	1	0	0.01125	0.98875	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215939885	13	88019718	C	T	-	-	-	-	-	-	35	0	0	65	18	27.69230769	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.091402715	1.091402715	1	0	0	1	0	0	0	0	3	1.52E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215940074	13	89777478	G	T	-	-	-	-	-	-	34	0	0	62	17	27.41935484	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.080645161	1.080645161	1	0	0	1	0	0	0	0	3	4.56E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215940486	13	93275494	A	T	GPC5	CCDS9468.1	r.?	-	-	intronic	35	0	0	52	11	21.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.833710407	0.833710407	1	0	0.01	0.99	0	0	0	0	3	2.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215940610	13	94624677	C	T	GPC6	CCDS9469.1	r.?	-	-	intronic	47	0	0	62	10	16.12903226	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.635673624	0.635673624	1	0	0.0775	0.9225	0	0	0	0	3	8.29E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215940743	13	96168144	A	T	CLDN10	CCDS9475.1	r.?	-	-	intronic	29	0	0	63	16	25.3968254	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.000933707	1.000933707	1	0	0	1	0	0	0	0	3	4.48E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215941020	13	99000858	A	T	FARP1	CCDS9487.1	r.?	-	-	intronic	23	0	0	33	8	24.24242424	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.95543672	0.95543672	1	0	0.015	0.985	0	0	0	0	3	4.85E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215941419	13	103359679	C	T	-	-	-	-	-	-	34	0	0	53	18	33.96226415	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.338512764	1.338512764	1	0	0	1	0	0	0	0	3	2.09E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215941792	13	106916995	A	T	-	-	-	-	-	-	33	0	0	67	17	25.37313433	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1	1	1	0	0.00125	0.99875	0	0	0	0	3	2.03E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1215941985	13	109036772	C	T	-	-	-	-	-	-	36	0	0	61	14	22.95081967	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.904532305	0.904532305	1	0	0.00125	0.99875	0	0	0	0	3	1.10E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215942274	13	112053026	G	T	-	-	-	-	-	-	30	0	0	38	4	10.52631579	0	0	NA	0	0	NA							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.21916899	1.555173859	0.140928931	0.00125	0.00375	0.995	0	0	0	0	3	4.03E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215942489	13	113871363	C	T	CUL4A	CCDS9533.1	r.?	-	-	intronic	34	0	0	85	36	42.35294118	247	1	0.4048583	71	27	38.02816901							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.881832876	0.881832876	1	0	0	1	0	0	0	0	3	1.43E-59	1	1.77E-43	0.7100648	YES	somatic	1_1
1353824	PD9772b	1215942555	13	114532960	A	T	GAS6	CCDS45072.1	r.?	-	-	intronic	22	0	0	11	3	27.27272727	0	0	NA	0	0	NA							1.140928931	1	0	0.859071069	1	1	0.140928931	unphased	0.567846928	0.567846928	1	0.005	0.06875	0.92625	0	0	0	0	3	2.00E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215943987	14	22337922	C	T	-	-	-	-	-	-	28	0	0	26	12	46.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.819004525	0.909502262	2	0	0.0025	0.9975	0	0	0	0	3	2.21E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215944157	14	24406832	C	T	C14orf167	ENST00000354854	r.?	-	-	upstream	33	0	0	59	17	28.81355932	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.13559322	1.13559322	1	0	0	1	0	0	0	0	3	1.74E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215944420	14	27141904	G	T	-	-	-	-	-	-	36	0	0	69	12	17.39130435	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.685421995	0.685421995	1	0	0.05375	0.94625	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215944719	14	29221619	C	T	-	-	-	-	-	-	30	0	0	59	17	28.81355932	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.13559322	1.13559322	1	0	0	1	0	0	0	0	3	1.74E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215945665	14	39290548	A	T	-	-	-	-	-	-	44	0	0	68	14	20.58823529	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.811418685	0.811418685	1	0	0.0075	0.9925	0	0	0	0	3	5.84E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215945769	14	40203825	G	T	-	-	-	-	-	-	38	0	0	32	12	37.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.477941176	1.477941176	1	0	0	1	0	0	0	0	3	5.03E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215945770	14	40203826	C	T	-	-	-	-	-	-	41	0	0	34	12	35.29411765	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.39100346	1.39100346	1	0	0.00125	0.99875	0	0	0	0	3	1.21E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215945858	14	41243886	G	T	-	-	-	-	-	-	35	0	0	60	21	35	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.379411765	1.379411765	1	0	0	1	0	0	0	0	3	3.16E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1215945943	14	41819526	C	T	-	-	-	-	-	-	39	0	0	13	5	38.46153846	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.515837104	1.515837104	1	0	0.00375	0.99625	0	0	0	0	3	3.89E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215946535	14	47927261	A	T	MDGA2	CCDS45098.1	r.?	-	-	intronic	30	0	0	52	11	21.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.833710407	0.833710407	1	0	0.01125	0.98875	0	0	0	0	3	2.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215946570	14	48512241	G	T	-	-	-	-	-	-	43	0	0	61	19	31.14754098	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.227579556	1.227579556	1	0	0	1	0	0	0	0	3	4.64E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215946678	14	49734139	G	T	-	-	-	-	-	-	29	0	0	61	25	40.98360656	0	0	NA	0	0	NA							3.829257977	2	1	0.170742023	3	1	0.829257977	unphased	1.955096085	0.977548042	2	0	0	1	0	0	0	0	3	2.20E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1215946807	14	50674793	C	T	SOS2	CCDS9697.1	r.?	-	-	intronic	27	0	0	17	8	47.05882353	0	0	NA	0	0	NA							3.829257977	2	1	0.170742023	3	1	0.829257977	unphased	2.244910328	1.122455164	2	0	0.0025	0.9975	0	0	0	0	3	9.12E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215946988	14	52433890	C	T	GNG2	CCDS32082.1	r.1230c>u	c.?	p.?	3'UTR variant	32	0	0	52	12	23.07692308	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.909502262	0.909502262	1	0	0.0025	0.9975	0	0	0	0	3	4.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215947127	14	53893481	G	T	-	-	-	-	-	-	40	0	0	62	17	27.41935484	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.080645161	1.080645161	1	0	0.00125	0.99875	0	0	0	0	3	4.56E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215947138	14	54014553	C	T	-	-	-	-	-	-	35	0	0	61	17	27.86885246	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.098360656	1.098360656	1	0	0.00125	0.99875	0	0	0	0	3	3.33E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1215947343	14	56189075	C	T	-	-	-	-	-	-	40	0	0	71	18	25.35211268	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.9991715	0.9991715	1	0	0.00125	0.99875	0	0	0	0	3	9.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215947494	14	57596503	A	T	-	-	-	-	-	-	39	0	0	67	15	22.3880597	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.00375	0.99625	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215948093	14	63784172	G	T	GPHB5	ENST00000314140	r.?	-	-	intronic	38	0	0	44	13	29.54545455	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.164438503	1.164438503	1	0	0	1	0	0	0	0	3	5.49E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215948160	14	64286593	C	T	-	-	-	-	-	-	27	0	0	37	8	21.62162162	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.852146264	0.852146264	1	0	0.0125	0.9875	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215948163	14	64336050	A	T	SYNE2	CCDS9761.2	r.?	-	-	intronic	41	0	0	41	11	26.82926829	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.057388809	1.057388809	1	0	0.0025	0.9975	0	0	0	0	3	1.34E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215948235	14	65079272	C	T	-	-	-	-	-	-	33	0	0	56	19	33.92857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.337184874	1.337184874	1	0	0	1	0	0	0	0	3	6.79E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215948269	14	65541543	C	T	MAX	CCDS9773.1	r.?	-	-	downstream	50	0	0	71	23	32.3943662	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.276719138	1.276719138	1	0	0	1	0	0	0	0	3	2.51E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1215948523	14	67765256	A	T	MPP5	CCDS9779.1	r.?	-	-	intronic	46	0	0	48	9	18.75	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.738970588	0.738970588	1	0	0.0225	0.9775	0	0	0	0	3	2.75E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215948625	14	68778593	G	T	RAD51L1	CCDS9789.1	r.?	-	-	intronic	44	0	0	31	9	29.03225806	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.144212524	1.144212524	1	0	0.00375	0.99625	0	0	0	0	3	3.57E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215949637	14	78710870	C	T	-	-	-	-	-	-	39	0	0	48	11	22.91666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.903186275	0.903186275	1	0	0.005	0.995	0	0	0	0	3	9.31E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215950383	14	86326940	G	T	-	-	-	-	-	-	45	0	0	86	26	30.23255814	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.191518468	1.191518468	1	0	0	1	0	0	0	0	3	8.05E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1215950464	14	86986802	C	T	-	-	-	-	-	-	43	0	0	36	12	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	2.73E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215950828	14	90270525	C	T	C14orf143	CCDS9887.1	r.?	-	-	intronic	39	0	0	55	18	32.72727273	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.289839572	1.289839572	1	0	0	1	0	0	0	0	3	4.61E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215950947	14	91429042	A	T	RPS6KA5	CCDS9893.1	r.?	-	-	intronic	36	0	0	48	13	27.08333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.067401961	1.067401961	1	0	0.00375	0.99625	0	0	0	0	3	2.00E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215951315	14	95478395	C	T	-	-	-	-	-	-	34	0	0	62	16	25.80645161	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.017077799	1.017077799	1	0	0.00125	0.99875	0	0	0	0	3	3.36E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215951404	14	96738069	C	T	-	-	-	-	-	-	34	0	0	46	17	36.95652174	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.456521739	1.456521739	1	0	0	1	0	0	0	0	3	1.16E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215951647	14	99306360	G	T	-	-	-	-	-	-	37	0	0	39	13	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	8.79E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215951688	14	99820895	G	T	-	-	-	-	-	-	42	0	0	18	6	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.005	0.995	0	0	0	0	3	2.75E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215951797	14	101464433	G	T	SNORD114-31	ENST00000363219	r.?	-	-	downstream	30	0	0	53	13	24.52830189	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.966703663	0.966703663	1	0	0.00125	0.99875	0	0	0	0	3	8.53E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215953776	15	20146548	A	T	-	-	-	-	-	-	50	0	0	79	16	20.25316456	0	0	NA	0	0	NA							3.434143845	2	1	0.565856155	2	2	0.434143845	unphased	0.886140823	0.886140823	1	0	0.00125	0.99875	0	0	0	0	3	2.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215953853	15	20276655	C	T	-	-	-	-	-	-	11	0	0	15	6	40	0	0	NA	0	0	NA							3.434143845	2	1	0.565856155	2	2	0.434143845	unphased	1.750128126	1.750128126	1	0	0.00125	0.99875	0	0	0	0	3	7.52E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215954620	15	22590297	C	T	-	-	-	-	-	-	18	0	0	50	13	26	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	1.255936493	1.255936493	1	0	0	1	0	0	0	0	3	3.65E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215954697	15	23161324	C	T	-	-	-	-	-	-	33	0	0	69	13	18.84057971	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	0.910098908	1.023332142	0.889348503	0	0.0025	0.9975	0	0	0	0	3	3.64E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215955222	15	26181902	A	T	ENSG00000206187	ENST00000383019	r.?	-	-	intronic	36	0	0	47	6	12.76595745	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	0.616662763	0.693387081	0.889348503	0.00375	0.02875	0.9675	0	0	0	0	3	1.41E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215955431	15	28005358	G	T	OCA2	CCDS10020.1	r.?	-	-	intronic	47	0	0	84	14	16.66666667	0	0	NA	0	0	NA							3.889348503	2	1	0.110651497	2	2	0.889348503	unphased	0.805087496	0.905255356	0.889348503	0	0.0025	0.9975	0	0	0	0	3	1.40E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215955497	15	28687783	C	T	-	-	-	-	-	-	14	1	7.142857143	43	10	23.25581395	45	0	0	17	0	0							3	2	1	1	NA	NA	NA	unphased	0.916552668	0.916552668	1	0	0.00875	0.99125	0	0	0	0	3	1.61E-14	0.067769881	1	1	NA	NA	NA
1353824	PD9772b	1215955575	15	29483281	C	T	FAM189A1	CCDS45198.1	r.?	-	-	intronic	36	0	0	66	13	19.6969697	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.776292335	0.776292335	1	0	0.01625	0.98375	0	0	0	0	3	1.95E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215955989	15	33933937	G	T	RYR3	CCDS45210.1	r.?	-	-	intronic	47	0	0	72	27	37.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.477941176	0.738970588	2	0	0.01125	0.98875	0	0	0	0	3	2.82E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1215956133	15	35455460	G	T	-	-	-	-	-	-	27	0	0	63	12	19.04761905	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.75070028	0.75070028	1	0.00125	0.02375	0.975	0	0	0	0	3	5.15E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215956601	15	40636080	C	T	C15orf52	CCDS10055.2	r.?	-	-	upstream	28	0	0	10	5	50	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.970588235	1.970588235	1	0	0.00375	0.99625	0	0	0	0	3	7.71E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215957440	15	47812901	A	T	-	-	-	-	-	-	43	0	0	63	19	30.15873016	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.188608777	1.188608777	1	0	0	1	0	0	0	0	3	9.48E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215957531	15	48821980	A	T	FBN1	CCDS32232.1	r.?	-	-	intronic	41	0	0	44	12	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0.00125	0.99875	0	0	0	0	3	4.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215957614	15	49649233	C	T	C15orf33	CCDS32237.1	r.?	-	-	intronic	18	0	0	26	5	19.23076923	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.757918552	0.757918552	1	0	0.025	0.975	0	0	0	0	3	1.88E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215958581	15	58807516	G	T	LIPC	CCDS10166.1	r.?	-	-	intronic	32	0	0	57	12	21.05263158	1	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.829721362	0.829721362	1	0	0.01	0.99	0	0	0	0	3	1.40E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215959150	15	63054388	G	T	TLN2	CCDS32261.1	r.?	-	-	intronic	29	0	0	45	6	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0.00375	0.03375	0.9625	0	0	0	0	3	1.08E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215959240	15	63674793	A	T	CA12	CCDS10185.1	r.?	-	-	upstream	27	0	0	15	3	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.02625	0.97375	0	0	0	0	3	5.44E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215959609	15	66236348	A	T	MEGF11	CCDS10213.2	r.?	-	-	intronic	30	0	0	55	17	30.90909091	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.527272727	0.763636364	2	0	0.0075	0.9925	0	0	0	0	3	4.35E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215959903	15	68484786	G	T	CALML4	CCDS42052.1	r.2751c>a	c.?	p.?	3'UTR variant	38	0	0	76	19	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	5.56E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215959906	15	68528816	G	T	-	-	-	-	-	-	35	0	0	83	14	16.86746988	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.833451453	0.833451453	1	0	0.0075	0.9925	0	0	0	0	3	1.17E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215959938	15	68761742	C	T	-	-	-	-	-	-	42	0	0	73	13	17.80821918	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.879935536	0.879935536	1	0	0.005	0.995	0	0	0	0	3	7.97E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215960011	15	69197460	C	T	-	-	-	-	-	-	39	0	0	30	8	26.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0	0.00125	0.99875	0	0	0	0	3	2.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215960105	15	69917038	C	T	-	-	-	-	-	-	22	0	0	48	9	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.00625	0.99375	0	0	0	0	3	2.75E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215960141	15	70163420	A	T	-	-	-	-	-	-	23	0	0	88	22	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.00125	0.99875	0	0	0	0	3	5.27E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215960282	15	71548989	A	T	THSD4	CCDS10238.2	r.1084a>u	c.950A>T	p.Q317L	missense	30	0	0	60	9	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.02125	0.97875	0	0	0	0	3	2.29E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215960516	15	73043766	A	T	ADPGK	CCDS42057.1	r.2501u>a	c.?	p.?	3'UTR variant	21	0	0	71	15	21.12676056	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.043910522	1.043910522	1	0	0	1	0	0	0	0	3	2.15E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215961082	15	79352860	A	T	RASGRF1	CCDS42065.1	r.?	-	-	intronic	39	0	0	38	9	23.68421053	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.933436533	0.933436533	1	0	0.0025	0.9975	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215961894	15	88251076	G	T	-	-	-	-	-	-	34	0	0	60	15	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215961926	15	88488367	A	T	NTRK3	CCDS10340.1	r.?	-	-	intronic	35	0	0	33	11	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	8.54E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215962363	15	92745598	C	T	AC116903.2	ENST00000502597	r.?	-	-	intronic	37	0	0	43	14	32.55813953	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.283173735	1.283173735	1	0	0	1	0	0	0	0	3	4.18E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215963070	15	99093676	A	T	-	-	-	-	-	-	23	0	0	41	9	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0.00375	0.99625	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215963269	15	100493002	C	T	-	-	-	-	-	-	30	0	0	77	14	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.005	0.995	0	0	0	0	3	3.82E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215963283	15	100715513	C	T	ADAMTS17	CCDS10383.1	r.?	-	-	intronic	26	0	0	50	15	30	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.482352941	1.482352941	1	0	0	1	0	0	0	0	3	5.83E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215963406	15	101246569	C	T	-	-	-	-	-	-	37	0	0	20	4	20	0	0	NA	0	0	NA							3.206976683	2	1	0.793023317	2	2	0.206976683	unphased	0.829630631	0.829630631	1	0.0025	0.02	0.9775	0	0	0	0	3	2.84E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215963566	15	102398518	C	T	-	-	-	-	-	-	35	0	0	53	12	22.64150943	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.665926748	0.665926748	1	0	0.05125	0.94875	0	0	0	0	3	5.39E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215963567	15	102406609	C	T	-	-	-	-	-	-	25	0	0	73	6	8.219178082	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.241740532	0.241740532	1	0.51	0.48625	0.00375	0	0	0	0	1	2.00E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215963799	16	3092357	C	T	MMP25	CCDS10492.1	r.?	-	-	upstream	28	0	0	18	6	33.33333333	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.696214029	0.696214029	1	0.0025	0.0475	0.95	0	0	0	0	3	2.75E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215964386	16	7432134	A	T	ENSG00000078328	CCDS45405.1	r.?	-	-	intronic	41	0	0	86	30	34.88372093	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.728596076	0.728596076	1	0	0.02125	0.97875	0	0	0	0	3	9.12E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1215964952	16	10739242	A	T	TEKT5	CCDS10542.1	r.?	-	-	intronic	33	0	0	40	17	42.5	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.887672887	0.887672887	1	0	0	1	0	0	0	0	3	6.07E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215964967	16	10794651	C	T	-	-	-	-	-	-	41	0	0	84	28	33.33333333	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.696214029	0.696214029	1	0	0.06375	0.93625	0	0	0	0	3	4.34E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1215964974	16	10831075	A	T	-	-	-	-	-	-	28	0	0	41	14	34.14634146	0	0	NA	0	0	NA							1.147465615	1	0	0.852534385	1	1	0.147465615	unphased	0.713194859	0.713194859	1	0.00125	0.03	0.96875	0	0	0	0	3	1.90E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215965047	16	11534688	G	T	ENSG00000188897	ENST00000344649	r.?	-	-	downstream	21	0	0	23	12	52.17391304	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	1.012787724	1.012787724	1	0	0	1	0	0	0	0	3	3.14E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215965060	16	11606231	G	T	ENSG00000228070	ENST00000412978	r.?	-	-	upstream	51	0	0	19	7	36.84210526	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.715170279	0.715170279	1	0.00125	0.03625	0.9625	0	0	0	0	3	3.73E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215965097	16	11908436	C	T	-	-	-	-	-	-	35	0	0	29	11	37.93103448	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.874239351	0.937119675	2	0	0.0025	0.9975	0	0	0	0	3	1.56E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215965170	16	12436156	C	T	SNX29	CCDS45416.1	r.?	-	-	intronic	28	0	0	70	26	37.14285714	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.835294118	0.917647059	2	0	0	1	0	0	0	0	3	1.35E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1215965306	16	13396383	C	T	-	-	-	-	-	-	33	0	0	86	38	44.18604651	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.183310534	1.091655267	2	0	0	1	0	0	0	0	3	1.07E-63	1	1	1	NA	NA	NA
1353824	PD9772b	1215965757	16	16731213	C	T	-	-	-	-	-	-	42	0	0	59	20	33.89830508	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.674975075	0.837487537	2	0	0	1	0	0	0	0	3	2.21E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215965912	16	17770129	C	T	-	-	-	-	-	-	30	0	0	52	24	46.15384615	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.280542986	1.140271493	2	0	0	1	0	0	0	0	3	2.22E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1215965953	16	18065969	C	T	-	-	-	-	-	-	28	0	0	34	17	50	0	0	NA	2	1	50							4	3	1	1	NA	NA	NA	unphased	2.470588235	0.823529412	3	0	0.00375	0.99625	0	0	0	0	3	1.64E-30	1	0.009975	1	NA	NA	NA
1353824	PD9772b	1215966115	16	19029238	C	T	TMC7	CCDS10573.1	r.?	-	-	intronic	47	0	0	39	16	41.02564103	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.027149321	1.013574661	2	0	0	1	0	0	0	0	3	5.16E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215966197	16	19474827	G	T	TMC5	CCDS45431.1	r.?	-	-	intronic	52	0	0	87	20	22.98850575	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.135902637	1.135902637	1	0	0	1	0	0	0	0	3	1.65E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215966493	16	21763286	G	T	OTOA	CCDS10600.2	r.2807g>u	c.2806G>T	p.D936Y	missense	13	0	0	22	5	22.72727273	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.895721925	0.895721925	1	0	0.01375	0.98625	0	0	0	0	3	7.67E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1215966501	16	21815851	A	T	ENSG00000179038	ENST00000314442	r.?	-	-	intronic	23	0	0	44	6	13.63636364	59	0	0	41	9	21.95121951							3	2	1	1	NA	NA	NA	unphased	0.537433155	0.537433155	1	0.01	0.1125	0.8775	0	0	0	0	3	9.37E-08	1	5.92E-13	1	YES	somatic	1_1
1353824	PD9772b	1215966849	16	25054248	C	T	AC133552.2	ENST00000500975	r.?	-	-	upstream	43	0	0	65	19	29.23076923	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.152036199	1.152036199	1	0	0.00125	0.99875	0	0	0	0	3	1.89E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1215967283	16	29580037	C	T	ENSG00000205534	ENST00000447140	r.?	-	-	intronic	33	0	0	88	11	12.5	0	0	NA	0	0	NA							1.86601229	1	0	0.13398771	1	1	0.86601229	unphased	0.350898595	0.350898595	1	0.19875	0.7925	0.00875	0	0	0	0	2	1.10E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215967332	16	29921674	G	T	KCTD13	CCDS10661.1	r.?	-	-	intronic	32	0	0	34	8	23.52941176	0	0	NA	0	0	NA							1.86601229	1	0	0.13398771	1	1	0.86601229	unphased	0.660515003	0.762708578	0.86601229	0	0.01875	0.98125	0	0	0	0	3	6.32E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215968446	16	32255124	C	T	-	-	-	-	-	-	29	0	0	53	10	18.86792453	0	0	NA	0	0	NA							1.86601229	1	0	0.13398771	1	1	0.86601229	unphased	0.529658257	0.611605935	0.86601229	0	0.1	0.9	0	0	0	0	3	1.57E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215968579	16	32381163	G	T	-	-	-	-	-	-	59	0	0	101	13	12.87128713	0	0	NA	0	0	NA							1.86601229	1	0	0.13398771	1	1	0.86601229	unphased	0.361321326	0.361321326	1	0.18	0.8125	0.0075	0	0	0	0	2	6.62E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215973803	16	34226846	G	T	-	-	-	-	-	-	37	0	0	55	19	34.54545455	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.361497326	1.361497326	1	0	0	1	0	0	0	0	3	4.51E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215975721	16	48602907	C	T	N4BP1	CCDS45479.1	r.?	-	-	intronic	39	0	0	71	15	21.12676056	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.832642916	0.832642916	1	0	0.0025	0.9975	0	0	0	0	3	2.15E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215975974	16	51587845	C	T	-	-	-	-	-	-	39	0	0	70	20	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	1.22E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215976235	16	54246764	C	T	-	-	-	-	-	-	43	0	0	72	16	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.00125	0.99875	0	0	0	0	3	4.82E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215976256	16	54448833	A	T	ENSG00000227093	ENST00000449142	r.?	-	-	intronic	24	0	0	31	9	29.03225806	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.144212524	1.144212524	1	0	0.00375	0.99625	0	0	0	0	3	3.57E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215976288	16	54728974	G	T	-	-	-	-	-	-	32	0	0	64	18	28.125	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.108455882	1.108455882	1	0	0	1	0	0	0	0	3	1.10E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215976982	16	62241554	G	T	-	-	-	-	-	-	40	0	0	67	15	22.3880597	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.00125	0.99875	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215977921	16	71223105	C	T	HYDIN2	CCDS42189.1	r.?	-	-	intronic	30	0	0	71	13	18.30985915	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.904722452	0.904722452	1	0	0.00375	0.99625	0	0	0	0	3	5.42E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215978031	16	71996542	C	T	PKD1L3	ENST00000335106	r.?	-	-	intronic	23	0	0	57	13	22.80701754	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.126934985	1.126934985	1	0	0	1	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215978243	16	73641069	A	T	-	-	-	-	-	-	40	0	0	42	8	19.04761905	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.005	0.995	0	0	0	0	3	3.96E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215978676	16	76996218	A	T	-	-	-	-	-	-	35	0	0	79	11	13.92405063	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.688011914	0.688011914	1	0	0.0375	0.9625	0	0	0	0	3	3.23E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1215978761	16	77568061	C	T	-	-	-	-	-	-	38	0	0	51	7	13.7254902	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.678200692	0.678200692	1	0.0025	0.04625	0.95125	0	0	0	0	3	7.46E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215979008	16	79260774	C	T	-	-	-	-	-	-	29	0	0	75	14	18.66666667	252	1	0.396825397	454	68	14.97797357							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0.00625	0.99375	0	0	0	0	3	2.57E-18	1	4.91E-76	0.717241058	YES	somatic	1_1
1353824	PD9772b	1215979372	16	81996618	C	T	PLCG2	CCDS42204.1	r.?	-	-	downstream	34	0	0	80	15	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0	1	0	0	0	0	3	1.49E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215979484	16	82726357	C	T	-	-	-	-	-	-	41	0	0	77	20	25.97402597	212	0	0	130	19	14.61538462							4	2	2	1	NA	NA	NA	unphased	1.28342246	1.28342246	1	0	0	1	0	0	0	0	3	1.07E-28	1	3.39E-22	1	YES	somatic	1_1
1353824	PD9772b	1215979529	16	82931664	G	T	CDH13	ENST00000268613	r.?	-	-	intronic	39	0	0	72	13	18.05555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.892156863	0.892156863	1	0	0.00875	0.99125	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215979869	16	85973448	C	T	-	-	-	-	-	-	38	0	0	80	10	12.5	0	0	NA	0	0	NA							0.188610277	0	0	0.811389723	1	0	0.188610277	unphased	0.141223343	0.748757414	0.188610277	0	0.02	0.98	0	0	0	0	3	1.17E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215979953	16	86441341	G	T	-	-	-	-	-	-	40	0	0	22	12	54.54545455	0	0	NA	0	0	NA							0.188610277	0	0	0.811389723	1	0	0.188610277	unphased	0.616247317	0.616247317	1	0.00625	0.4125	0.58125	0	0	0	0	3	1.51E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1215980001	16	86745889	C	T	-	-	-	-	-	-	36	0	0	22	7	31.81818182	0	0	NA	0	0	NA							0.188610277	0	0	0.811389723	1	0	0.188610277	unphased	0.359477602	0.359477602	1	0.2225	0.77125	0.00625	0	0	0	0	2	1.25E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215980347	16	89647023	C	T	CPNE7	CCDS10980.1	r.?	-	-	intronic	34	0	0	17	4	23.52941176	0	0	NA	0	0	NA							0.19281616	0	0	0.80718384	1	0	0.19281616	unphased	0.266821795	1.383814486	0.19281616	0.00125	0.00625	0.9925	0	0	0	0	3	1.41E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1215981875	17	11051510	A	T	-	-	-	-	-	-	35	0	0	39	10	25.64102564	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.901636363	0.901636363	1	0	0.00875	0.99125	0	0	0	0	3	5.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215982891	17	16540774	C	T	ZNF624	CCDS11180.1	r.?	-	-	intronic	28	0	0	53	12	22.64150943	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	0.796161921	0.796161921	1	0	0.00875	0.99125	0	0	0	0	3	5.39E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215985969	17	27864906	C	T	TAOK1	CCDS32601.1	r.?	-	-	intronic	22	0	0	26	10	38.46153846	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.352454545	1.352454545	1	0	0.00125	0.99875	0	0	0	0	3	4.82E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215986008	17	28114123	C	T	SSH2	CCDS11253.1	r.?	-	-	intronic	29	0	0	70	31	44.28571429	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.557254805	1.092967889	1.424794653	0	0	1	0	0	0	0	3	2.75E-52	1	1	1	NA	NA	NA
1353824	PD9772b	1215986091	17	28684622	A	T	-	-	-	-	-	-	38	0	0	84	38	45.23809524	0	0	NA	0	0	NA							2.575205347	2	0	0.424794653	2	1	0.575205347	unphased	1.590744155	1.116472575	1.424794653	0	0	1	0	0	0	0	3	3.35E-64	1	1	1	NA	NA	NA
1353824	PD9772b	1215986374	17	30467017	A	T	RHOT1	CCDS32610.1	r.?	-	-	upstream	46	0	0	53	6	11.32075472	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.446170921	0.446170921	1	0.0375	0.305	0.6575	0	0	0	0	3	2.93E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215987210	17	40733126	A	T	FAM134C	CCDS11432.1	r.2166u>a	c.?	p.?	3'UTR variant	31	0	0	27	5	18.51851852	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.729847495	0.729847495	1	0	0.02375	0.97625	0	0	0	0	3	2.30E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215987261	17	41326882	G	T	NBR1	CCDS45694.1	r.?	-	-	intronic	21	0	0	23	6	26.08695652	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.028132992	1.028132992	1	0	0.01125	0.98875	0	0	0	0	3	1.47E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215987934	17	48480424	C	T	-	-	-	-	-	-	36	0	0	67	21	31.34328358	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	4.96E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215988340	17	52107650	A	T	-	-	-	-	-	-	40	0	0	50	15	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0	1	0	0	0	0	3	5.83E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1215988396	17	52713870	A	T	-	-	-	-	-	-	51	0	0	38	11	28.94736842	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.140866873	1.140866873	1	0	0	1	0	0	0	0	3	5.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215988410	17	52892407	A	T	-	-	-	-	-	-	32	0	0	63	12	19.04761905	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.75070028	0.75070028	1	0	0.01375	0.98625	0	0	0	0	3	5.15E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215988648	17	55093765	C	T	-	-	-	-	-	-	36	1	2.777777778	59	19	32.20338983	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.269192423	1.269192423	1	0	0	1	0	0	0	0	3	2.20E-29	0.165106833	1	1	NA	NA	NA
1353824	PD9772b	1215988709	17	55883131	C	T	-	-	-	-	-	-	32	0	0	58	12	20.68965517	1	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.815415822	0.815415822	1	0	0.01125	0.98875	0	0	0	0	3	1.76E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215988744	17	56399903	A	T	BZRAP1	CCDS11605.1	r.?	-	-	intronic	32	0	0	11	4	36.36363636	3	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.43315508	1.43315508	1	0	0.0075	0.9925	0	0	0	0	3	2.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215989400	17	63339355	G	T	-	-	-	-	-	-	34	0	0	23	9	39.13043478	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.542199488	1.542199488	1	0	0	1	0	0	0	0	3	1.50E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215989735	17	65921461	G	T	BPTF	CCDS11673.1	r.?	-	-	intronic	39	0	0	59	19	32.20338983	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.591226321	0.795613161	2	0	0.005	0.995	0	0	0	0	3	2.20E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215989743	17	65991894	A	T	C17orf58	CCDS42375.1	r.?	-	-	upstream	30	0	0	4	2	50	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.470588235	2.470588235	1	0.00125	0.015	0.98375	0	0	0	0	3	0.000149002	1	1	1	NA	NA	NA
1353824	PD9772b	1215989814	17	66487102	C	T	-	-	-	-	-	-	36	0	0	66	35	53.03030303	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.620320856	0.873440285	3	0	0	1	0	0	0	0	3	1.60E-62	1	1	1	NA	NA	NA
1353824	PD9772b	1215990304	17	69558927	G	T	-	-	-	-	-	-	45	0	0	83	9	10.84337349	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.53579022	0.53579022	1	0.00625	0.20875	0.785	0	0	0	0	3	4.60E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215990324	17	69704478	G	T	-	-	-	-	-	-	34	0	0	108	21	19.44444444	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.960784314	0.960784314	1	0	0	1	0	0	0	0	3	3.87E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215990434	17	70260840	G	T	-	-	-	-	-	-	23	0	0	73	34	46.57534247	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.904109589	0.904109589	1	0	0	1	0	0	0	0	3	3.57E-58	1	1	1	NA	NA	NA
1353824	PD9772b	1215990830	17	72625327	A	T	-	-	-	-	-	-	22	0	0	28	6	21.42857143	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.415966387	0.415966387	1	0.07625	0.6175	0.30625	0	0	0	0	2	5.36E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215990831	17	72626832	G	T	-	-	-	-	-	-	21	0	0	78	14	17.94871795	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.34841629	0.34841629	1	0.24375	0.75625	0	0	0	0	0	2	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215991001	17	73710973	G	T	-	-	-	-	-	-	30	0	0	38	10	26.31578947	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.510835913	0.510835913	1	0.02	0.54875	0.43125	0	0	0	0	2	4.06E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215991010	17	73863940	C	T	AC087289.1	ENST00000501755	r.?	-	-	intronic	46	0	0	65	11	16.92307692	0	0	NA	0	0	NA							1	1	0	1	NA	NA	NA	unphased	0.328506787	0.328506787	1	0.28375	0.71375	0.0025	0	0	0	0	2	3.41E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215991241	17	76251583	G	T	-	-	-	-	-	-	24	0	0	15	4	26.66666667	0	0	NA	0	0	NA							0.675223744	0	0	0.324776256	1	0	0.675223744	unphased	0.431040057	0.431040057	1	0.03875	0.3875	0.57375	0	0	0	0	3	8.16E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1215992580	18	4377058	A	T	-	-	-	-	-	-	38	0	0	103	36	34.95145631	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.076527698	1.038263849	2	0	0	1	0	0	0	0	3	7.66E-56	1	1	1	NA	NA	NA
1353824	PD9772b	1215992619	18	4596641	A	T	-	-	-	-	-	-	31	0	0	90	16	17.77777778	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.05620915	1.05620915	1	0	0.0025	0.9975	0	0	0	0	3	2.31E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215992903	18	6648842	G	T	-	-	-	-	-	-	31	0	0	61	19	31.14754098	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.539054966	0.769527483	2	0	0.01375	0.98625	0	0	0	0	3	4.64E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215992929	18	6878538	C	T	ARHGAP28	CCDS32785.1	r.?	-	-	intronic	28	0	0	96	13	13.54166667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.669117647	0.669117647	1	0.00125	0.0575	0.94125	0	0	0	0	3	3.35E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215993050	18	7726602	C	T	PTPRM	CCDS11840.1	r.?	-	-	intronic	33	0	0	90	22	24.44444444	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.207843137	1.207843137	1	0	0	1	0	0	0	0	3	9.17E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1215993107	18	8413407	C	T	-	-	-	-	-	-	45	0	0	104	14	13.46153846	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.665158371	0.665158371	1	0	0.05	0.95	0	0	0	0	3	3.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215993323	18	9959764	A	T	VAPA	CCDS11848.2	r.6561a>u	c.?	p.?	3'UTR variant	14	0	0	62	5	8.064516129	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.398481973	0.398481973	1	0.06375	0.3375	0.59875	0	0	0	0	3	1.60E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1215993664	18	12812593	C	T	PTPN2	CCDS11865.1	r.?	-	-	intronic	30	0	0	56	14	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	2.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1215993723	18	13546960	G	T	C18orf1	CCDS32793.1	r.?	-	-	intronic	42	0	0	64	11	17.1875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.849264706	0.849264706	1	0	0.0075	0.9925	0	0	0	0	3	2.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1215993726	18	13559689	G	T	C18orf1	CCDS32793.1	r.?	-	-	intronic	36	0	0	89	23	25.84269663	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.276933245	1.276933245	1	0	0	1	0	0	0	0	3	1.02E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1215995035	18	15208597	G	T	-	-	-	-	-	-	40	0	0	61	12	19.67213115	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.972034716	0.972034716	1	0	0.005	0.995	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215995738	18	18669228	C	T	ROCK1	CCDS11870.2	r.?	-	-	intronic	33	0	0	32	7	21.875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.080882353	1.080882353	1	0.00125	0.005	0.99375	0	0	0	0	3	2.36E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1215995771	18	18913050	C	T	GREB1L	CCDS45836.1	r.?	-	-	intronic	30	0	0	71	10	14.08450704	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.695940348	0.695940348	1	0.00125	0.04	0.95875	0	0	0	0	3	3.42E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1215996473	18	23460376	C	T	-	-	-	-	-	-	39	0	0	99	22	22.22222222	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.320261438	1.320261438	1	0	0	1	0	0	0	0	3	9.43E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1215996632	18	24338608	G	T	-	-	-	-	-	-	34	0	0	106	21	19.81132075	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.177025527	1.177025527	1	0	0	1	0	0	0	0	3	2.53E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1215996933	18	26279005	G	T	-	-	-	-	-	-	42	0	0	93	13	13.97849462	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.830487034	0.830487034	1	0	0.0025	0.9975	0	0	0	0	3	2.18E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215997024	18	26754121	G	T	-	-	-	-	-	-	29	0	0	96	20	20.83333333	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.237745098	1.237745098	1	0	0	1	0	0	0	0	3	1.43E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1215997034	18	26903585	G	T	-	-	-	-	-	-	47	0	0	57	12	21.05263158	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.250773994	1.250773994	1	0	0.00125	0.99875	0	0	0	0	3	1.40E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1215997248	18	28000542	G	T	-	-	-	-	-	-	43	0	0	85	16	18.82352941	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.1183391	1.1183391	1	0	0.00125	0.99875	0	0	0	0	3	8.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1215997324	18	28360798	G	T	-	-	-	-	-	-	38	0	0	87	21	24.13793103	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.434077079	0.71703854	2	0	0.0175	0.9825	0	0	0	0	3	2.64E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215997429	18	28989183	C	T	DSG4	CCDS45845.1	r.?	-	-	intronic	37	0	0	86	15	17.44186047	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.03625171	1.03625171	1	0	0	1	0	0	0	0	3	4.76E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215997482	18	29358411	C	T	-	-	-	-	-	-	27	0	0	90	13	14.44444444	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.858169935	0.858169935	1	0	0.00625	0.99375	0	0	0	0	3	1.40E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1215997691	18	30409367	G	T	-	-	-	-	-	-	51	0	0	99	38	38.38383838	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.280451575	1.140225787	2	0	0	1	0	0	0	0	3	9.49E-61	1	1	1	NA	NA	NA
1353824	PD9772b	1215997725	18	30584181	G	T	C18orf34	CCDS42424.1	r.?	-	-	intronic	33	0	0	101	31	30.69306931	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.823529412	0.911764706	2	0	0	1	0	0	0	0	3	3.17E-46	1	1	1	NA	NA	NA
1353824	PD9772b	1215997926	18	32463047	C	T	DTNA	CCDS45848.1	r.?	-	-	intronic	37	0	0	67	8	11.94029851	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.709394205	0.709394205	1	0	0.0375	0.9625	0	0	0	0	3	1.96E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1215997994	18	32884602	C	T	-	-	-	-	-	-	34	0	0	109	15	13.76146789	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.817593092	0.817593092	1	0	0.005	0.995	0	0	0	0	3	1.99E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215998230	18	34235842	C	T	FHOD3	CCDS32816.1	r.?	-	-	intronic	40	0	0	53	21	39.62264151	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.354051054	1.177025527	2	0	0	1	0	0	0	0	3	1.30E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1215998332	18	35033543	G	T	CELF4	CCDS32818.1	r.?	-	-	intronic	41	0	0	69	9	13.04347826	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.774936061	0.774936061	1	0	0.0125	0.9875	0	0	0	0	3	8.45E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215998514	18	36172470	G	T	-	-	-	-	-	-	38	0	0	102	16	15.68627451	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.93194925	0.93194925	1	0	0.00125	0.99875	0	0	0	0	3	1.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215998517	18	36183162	C	T	-	-	-	-	-	-	35	0	0	75	20	26.66666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.584313725	0.792156863	2	0	0.00375	0.99625	0	0	0	0	3	5.89E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1215998605	18	36690862	G	T	-	-	-	-	-	-	36	0	0	99	45	45.45454545	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.700534759	0.900178253	3	0	0	1	0	0	0	0	3	7.37E-76	1	1	1	NA	NA	NA
1353824	PD9772b	1215998876	18	38252925	A	T	-	-	-	-	-	-	39	0	0	104	16	15.38461538	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.914027149	0.914027149	1	0	0.00125	0.99875	0	0	0	0	3	2.67E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1215999092	18	39527865	C	T	-	-	-	-	-	-	35	0	0	22	10	45.45454545	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.700534759	0.900178253	3	0.00125	0.0025	0.99625	0	0	0	0	3	5.98E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1215999313	18	40960883	C	T	-	-	-	-	-	-	29	0	0	96	10	10.41666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.618872549	0.618872549	1	0	0.1	0.9	0	0	0	0	3	7.45E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1215999644	18	42902451	A	T	-	-	-	-	-	-	43	0	0	114	15	13.15789474	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.781733746	0.781733746	1	0	0.0125	0.9875	0	0	0	0	3	4.00E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1215999951	18	44881774	G	T	-	-	-	-	-	-	38	0	0	77	12	15.58441558	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.925897632	0.925897632	1	0	0.005	0.995	0	0	0	0	3	6.64E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216000126	18	45794357	C	T	-	-	-	-	-	-	35	0	0	93	13	13.97849462	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.830487034	0.830487034	1	0	0.00625	0.99375	0	0	0	0	3	2.18E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216000494	18	48077788	C	T	-	-	-	-	-	-	27	0	0	66	7	10.60606061	1	0	0	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.630124777	0.630124777	1	0.00125	0.05125	0.9475	0	0	0	0	3	4.70E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216000639	18	48966561	C	T	ENSG00000227115	ENST00000435144	r.?	-	-	intronic	31	0	0	101	16	15.84158416	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.00125	0.99875	0	0	0	0	3	1.63E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216000728	18	49637863	A	T	-	-	-	-	-	-	31	0	0	74	12	16.21621622	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.963434022	0.963434022	1	0	0.005	0.995	0	0	0	0	3	4.02E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216000732	18	49646932	A	T	-	-	-	-	-	-	47	0	0	86	11	12.79069767	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.759917921	0.759917921	1	0	0.02125	0.97875	0	0	0	0	3	8.47E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216000904	18	50547826	G	T	DCC	CCDS11952.1	r.?	-	-	intronic	33	0	0	86	16	18.60465116	2	0	0	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.105335157	1.105335157	1	0	0.00125	0.99875	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216001580	18	54872051	G	T	-	-	-	-	-	-	31	0	0	68	16	23.52941176	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0	1	0	0	0	0	3	1.75E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216001582	18	54893171	G	T	-	-	-	-	-	-	35	0	0	68	15	22.05882353	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.089965398	1.089965398	1	0	0.00125	0.99875	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216001875	18	57096887	G	T	CCBE1	ENST00000333570	r.?	-	-	downstream	35	0	0	46	11	23.91304348	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.181585678	1.181585678	1	0	0	1	0	0	0	0	3	5.55E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216002166	18	59098624	A	T	-	-	-	-	-	-	35	0	0	84	31	36.9047619	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.823529412	0.911764706	2	0	0	1	0	0	0	0	3	3.39E-49	1	1	1	NA	NA	NA
1353824	PD9772b	1216002608	18	61937464	G	T	-	-	-	-	-	-	41	0	0	62	30	48.38709677	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.390891841	1.19544592	2	0	0	1	0	0	0	0	3	3.60E-52	1	1	1	NA	NA	NA
1353824	PD9772b	1216002687	18	62436082	G	T	-	-	-	-	-	-	37	0	0	101	38	37.62376238	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.235294118	1.117647059	2	0	0	1	0	0	0	0	3	2.43E-60	1	1	1	NA	NA	NA
1353824	PD9772b	1216002729	18	62618074	G	T	-	-	-	-	-	-	25	0	0	92	19	20.65217391	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.226982097	1.226982097	1	0	0.00125	0.99875	0	0	0	0	3	3.08E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216002734	18	62636554	C	T	-	-	-	-	-	-	50	0	0	112	13	11.60714286	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.68960084	0.68960084	1	0	0.04125	0.95875	0	0	0	0	3	2.62E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216002758	18	62775020	G	T	-	-	-	-	-	-	37	0	0	98	32	32.65306122	2	0	0	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.93997599	0.969987995	2	0	0	1	0	0	0	0	3	1.11E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1216002766	18	62863413	C	T	-	-	-	-	-	-	40	0	0	101	19	18.81188119	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.117647059	1.117647059	1	0	0	1	0	0	0	0	3	2.10E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216002875	18	63524376	A	T	CDH7	CCDS11993.1	r.?	-	-	intronic	43	0	0	77	13	16.88311688	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.003055768	1.003055768	1	0	0.00375	0.99625	0	0	0	0	3	1.67E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216003037	18	64357001	C	T	-	-	-	-	-	-	41	0	0	103	18	17.47572816	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.038263849	1.038263849	1	0	0	1	0	0	0	0	3	1.40E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216003266	18	65423090	C	T	AC114689.1	ENST00000500778	r.?	-	-	intronic	41	0	0	99	15	15.15151515	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.900178253	0.900178253	1	0	0	1	0	0	0	0	3	4.43E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216003326	18	65696309	A	T	-	-	-	-	-	-	31	0	0	83	9	10.84337349	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.644223955	0.644223955	1	0	0.05875	0.94125	0	0	0	0	3	4.60E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216003396	18	65955074	C	T	-	-	-	-	-	-	38	0	0	111	20	18.01801802	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.070482247	1.070482247	1	0	0	1	0	0	0	0	3	3.31E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216003452	18	66233187	C	T	-	-	-	-	-	-	35	0	0	57	11	19.29824561	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.953560372	0.953560372	1	0	0.00375	0.99625	0	0	0	0	3	7.29E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216003786	18	68376515	G	T	-	-	-	-	-	-	47	0	0	88	13	14.77272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.729946524	0.729946524	1	0	0.02125	0.97875	0	0	0	0	3	1.03E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216003896	18	69205264	A	T	-	-	-	-	-	-	35	1	2.857142857	77	19	24.67532468	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.219251337	1.219251337	1	0	0.00125	0.99875	0	0	0	0	3	7.35E-27	0.16091139	1	1	NA	NA	NA
1353824	PD9772b	1216004306	18	71880828	C	T	-	-	-	-	-	-	33	0	0	66	14	21.21212121	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.048128342	1.048128342	1	0	0	1	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216004317	18	72043814	G	T	-	-	-	-	-	-	35	0	0	84	13	15.47619048	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.02125	0.97875	0	0	0	0	3	5.49E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216004349	18	72380073	C	T	ZNF407	CCDS45885.1	r.?	-	-	intronic	37	0	0	69	25	36.23188406	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.79028133	0.895140665	2	0	0	1	0	0	0	0	3	1.00E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216004363	18	72511290	G	T	ZNF407	CCDS45885.1	r.?	-	-	intronic	47	0	0	64	12	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.00125	0.99875	0	0	0	0	3	6.30E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216004471	18	73451800	C	T	-	-	-	-	-	-	48	0	0	78	17	21.79487179	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.076923077	1.076923077	1	0	0	1	0	0	0	0	3	3.59E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216004493	18	73688416	C	T	-	-	-	-	-	-	21	0	0	70	20	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0	1	0	0	0	0	3	1.22E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216004680	18	75121649	G	T	-	-	-	-	-	-	35	0	0	62	11	17.74193548	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.876660342	0.876660342	1	0	0.00625	0.99375	0	0	0	0	3	1.96E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216005402	19	2818670	C	T	ZNF554	CCDS42462.1	r.?	-	-	upstream	47	0	0	40	7	17.5	0	0	NA	0	0	NA							0	0	0	1	NA	NA	NA	unphased	0.164705882	0.164705882	1	0.965	0.035	0	0	0	0	0	1	1.26E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216005515	19	4352392	G	T	MPND	CCDS42470.1	r.?	-	-	intronic	30	0	0	23	4	17.39130435	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.499145544	0.537345195	0.928910409	0.01	0.0925	0.8975	0	0	0	0	3	5.13E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216005659	19	5928906	A	T	RANBP3	CCDS42478.1	r.?	-	-	intronic	39	0	0	44	6	13.63636364	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.391375484	0.391375484	1	0.0925	0.57875	0.32875	0	0	0	0	2	9.37E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216006275	19	10761328	A	T	ILF3	CCDS45965.1	r.?	-	-	upstream	43	0	0	50	14	28	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.803624326	0.865125763	0.928910409	0	0.0025	0.9975	0	0	0	0	3	4.84E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216006570	19	13111886	C	T	NFIX	CCDS45996.1	r.?	-	-	intronic	28	0	0	14	4	28.57142857	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.820024823	0.820024823	1	0.00125	0.03375	0.965	0	0	0	0	3	6.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216006731	19	14772427	G	T	EMR3	CCDS12315.1	r.?	-	-	intronic	41	0	0	51	9	17.64705882	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.50648592	0.50648592	1	0.01875	0.3475	0.63375	0	0	0	0	3	4.92E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216007313	19	19587006	C	T	GATAD2A	CCDS12402.2	r.?	-	-	intronic	39	0	0	52	6	11.53846154	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.331163871	0.331163871	1	0.1875	0.71	0.1025	0	0	0	0	2	2.61E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216007368	19	20036782	C	T	ZNF90	CCDS32973.1	r.?	-	-	intronic	37	0	0	73	12	16.43835616	0	0	NA	0	0	NA							1.928910409	1	0	0.071089591	1	1	0.928910409	unphased	0.471795103	0.471795103	1	0.03125	0.71625	0.2525	0	0	0	0	2	3.39E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216007971	19	23531206	C	T	ENSG00000235694	ENST00000439808	r.?	-	-	intronic	34	0	0	86	18	20.93023256	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.615595075	0.615595075	1	0.00125	0.17875	0.82	0	0	0	0	3	4.22E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216008006	19	23807576	C	T	-	-	-	-	-	-	20	0	0	26	4	15.38461538	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.452488688	0.452488688	1	0.02625	0.1825	0.79125	0	0	0	0	3	8.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216009062	19	29071368	G	T	AC005307.1	ENST00000511462	r.?	-	-	intronic	37	0	0	73	15	20.54794521	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.60435133	0.60435133	1	0	0.1875	0.8125	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216009191	19	30189632	C	T	C19orf12	CCDS12418.2	r.?	-	-	downstream	30	0	0	72	18	25	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.735294118	0.735294118	1	0	0.01375	0.98625	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216009193	19	30200728	C	T	C19orf12	CCDS12418.2	r.?	-	-	intronic	34	0	0	65	13	20	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.588235294	0.588235294	1	0.005	0.2225	0.7725	0	0	0	0	3	1.57E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216009297	19	31045716	C	T	ZNF536	CCDS32984.1	r.?	-	-	intronic	33	0	0	62	9	14.51612903	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.426944972	0.426944972	1	0.06375	0.73625	0.2	0	0	0	0	2	3.12E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216009357	19	31420337	C	T	-	-	-	-	-	-	28	0	0	91	16	17.58241758	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.517129929	0.517129929	1	0.01125	0.6975	0.29125	0	0	0	0	2	2.79E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216009436	19	32045214	C	T	ENSG00000232700	ENST00000441786	r.?	-	-	intronic	31	0	0	46	13	28.26086957	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.831202046	0.831202046	1	0	0.00125	0.99875	0	0	0	0	3	1.07E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216009494	19	32535022	C	T	AC005547.1	ENST00000504888	r.?	-	-	intronic	37	0	0	78	17	21.79487179	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.641025641	0.641025641	1	0	0.095	0.905	0	0	0	0	3	3.59E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216009508	19	32600013	G	T	AC005265.1	ENST00000513947	r.?	-	-	upstream	39	0	0	69	14	20.28985507	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.596760443	0.596760443	1	0.00375	0.215	0.78125	0	0	0	0	3	7.30E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216009597	19	33244777	C	T	TDRD12	CCDS46038.1	r.?	-	-	intronic	30	0	0	55	7	12.72727273	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.374331551	0.374331551	1	0.125	0.715	0.16	0	0	0	0	2	1.28E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216009599	19	33263307	C	T	TDRD12	CCDS46038.1	r.?	-	-	intronic	31	0	0	38	11	28.94736842	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.851393189	0.851393189	1	0	0.0025	0.9975	0	0	0	0	3	5.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216009771	19	34762246	C	T	KIAA0355	CCDS12436.1	r.?	-	-	intronic	27	0	0	41	9	21.95121951	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.645624103	0.645624103	1	0.00125	0.07625	0.9225	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216009960	19	36417351	A	T	-	-	-	-	-	-	35	0	0	38	5	13.15789474	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.386996904	0.386996904	1	0.075	0.47625	0.44875	0	0	0	0	2	1.37E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216010129	19	37429150	C	T	ZNF568	CCDS42558.1	r.?	-	-	intronic	30	0	0	87	27	31.03448276	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.912778905	0.912778905	1	0	0	1	0	0	0	0	3	1.30E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216010291	19	38310863	G	T	ZNF573	ENST00000392138	r.?	-	-	upstream	30	0	0	30	5	16.66666667	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.490196078	0.490196078	1	0.0175	0.18125	0.80125	0	0	0	0	3	4.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216010523	19	40097578	C	T	LGALS13	CCDS33024.1	r.?	-	-	intronic	30	0	0	65	19	29.23076923	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.859728507	0.859728507	1	0	0.0025	0.9975	0	0	0	0	3	1.89E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216010648	19	41237361	G	T	ITPKC	CCDS12563.1	r.?	-	-	intronic	25	0	0	22	3	13.63636364	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.401069519	0.401069519	1	0.0275	0.20875	0.76375	0	0	0	0	3	0.000179267	1	1	1	NA	NA	NA
1353824	PD9772b	1216010719	19	41542410	A	T	-	-	-	-	-	-	38	0	0	103	8	7.766990291	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.228440891	0.228440891	1	0.70125	0.29875	0	0	0	0	0	1	6.09E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216010911	19	43386870	C	T	PSG1	CCDS12612.1	r.?	-	-	upstream	40	0	0	72	18	25	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.735294118	0.735294118	1	0	0.01375	0.98625	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216011268	19	45111422	A	T	-	-	-	-	-	-	35	0	0	74	22	29.72972973	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.874403816	0.874403816	1	0	0.00125	0.99875	0	0	0	0	3	6.78E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216011521	19	47518921	G	T	NPAS1	CCDS12694.1	r.?	-	-	upstream	36	0	0	47	8	17.0212766	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.500625782	0.500625782	1	0.01875	0.325	0.65625	0	0	0	0	3	1.03E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216011572	19	47898178	A	T	-	-	-	-	-	-	33	0	0	67	11	16.41791045	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.482879719	0.482879719	1	0.025	0.63375	0.34125	0	0	0	0	2	4.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216011939	19	51123562	G	T	SYT3	CCDS12798.1	r.?	-	-	downstream	27	0	0	43	9	20.93023256	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.734045585	0.734045585	1	0	0.025	0.975	0	0	0	0	3	9.45E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216011958	19	51295793	C	T	ACPT	CCDS12802.1	r.?	-	-	intronic	25	0	0	46	9	19.56521739	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.686173047	1.212469369	0.565930212	0	0.00625	0.99375	0	0	0	0	3	1.82E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216012556	19	54525618	C	T	-	-	-	-	-	-	23	0	0	38	6	15.78947368	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.553753687	0.978484052	0.565930212	0	0.01	0.99	0	0	0	0	3	3.76E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216012717	19	55252976	G	T	KIR3DL3	CCDS12903.1	r.?	-	-	downstream	49	0	0	86	18	20.93023256	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	0.734045585	0.734045585	1	0	0.01375	0.98625	0	0	0	0	3	4.22E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216012849	19	55347966	C	T	KIR3DL1	ENST00000355608	r.?	-	-	intronic	11	0	0	41	13	31.70731707	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	1.112009436	1.112009436	1	0	0	1	0	0	0	0	3	1.89E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216013280	19	57432813	G	T	-	-	-	-	-	-	35	0	0	35	10	28.57142857	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	1.002030481	1.002030481	1	0	0.00125	0.99875	0	0	0	0	3	1.60E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216013491	19	58426450	G	T	ZNF417	CCDS12965.1	r.?	-	-	intronic	28	0	0	68	21	30.88235294	0	0	NA	0	0	NA							2.565930212	1	1	0.434069788	2	1	0.565930212	unphased	1.083077064	1.083077064	1	0	0	1	0	0	0	0	3	7.15E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216013956	2	2325741	A	T	MYT1L	CCDS46222.1	r.?	-	-	intronic	26	0	0	70	20	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0	1	0	0	0	0	3	1.22E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216014248	2	4984982	C	T	-	-	-	-	-	-	38	0	0	70	14	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	9.08E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216014426	2	6016320	A	T	-	-	-	-	-	-	43	0	0	83	15	18.07228916	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.8929837	0.8929837	1	0	0	1	0	0	0	0	3	2.70E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216014522	2	6883610	A	T	-	-	-	-	-	-	34	0	0	77	14	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.00375	0.99625	0	0	0	0	3	3.82E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216014523	2	6914369	A	T	-	-	-	-	-	-	37	0	0	85	19	22.35294118	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.10449827	1.10449827	1	0	0	1	0	0	0	0	3	5.93E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216014585	2	7439187	A	T	ENSG00000234603	ENST00000441133	r.?	-	-	intronic	31	0	0	78	12	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0.00125	0.02375	0.975	0	0	0	0	3	7.82E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216014622	2	7768401	G	T	-	-	-	-	-	-	24	0	0	84	13	15.47619048	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.01625	0.98375	0	0	0	0	3	5.49E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216014685	2	8117868	C	T	-	-	-	-	-	-	28	0	0	76	18	23.68421053	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.170278638	1.170278638	1	0	0	1	0	0	0	0	3	3.63E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216014712	2	8322245	G	T	-	-	-	-	-	-	31	0	0	69	15	21.73913043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.074168798	1.074168798	1	0	0	1	0	0	0	0	3	1.34E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216015349	2	13444749	A	T	-	-	-	-	-	-	31	0	0	69	10	14.49275362	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.716112532	0.716112532	1	0.00125	0.03	0.96875	0	0	0	0	3	2.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216015354	2	13492722	A	T	-	-	-	-	-	-	45	0	0	49	11	22.44897959	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.109243697	1.109243697	1	0	0.005	0.995	0	0	0	0	3	1.19E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216015397	2	13746196	G	T	-	-	-	-	-	-	49	0	0	76	12	15.78947368	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.780185759	0.780185759	1	0	0.02125	0.97875	0	0	0	0	3	5.63E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216015508	2	14555275	A	T	-	-	-	-	-	-	39	0	0	82	16	19.51219512	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.964131994	0.964131994	1	0	0.00125	0.99875	0	0	0	0	3	4.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216015700	2	15903642	A	T	-	-	-	-	-	-	28	0	0	17	5	29.41176471	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.453287197	1.453287197	1	0	0.00375	0.99625	0	0	0	0	3	1.84E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216015855	2	17494298	A	T	-	-	-	-	-	-	49	0	0	85	17	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	1.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216015884	2	17801005	C	T	VSNL1	CCDS1689.1	r.?	-	-	intronic	35	0	0	66	13	19.6969697	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.973262032	0.973262032	1	0	0.00125	0.99875	0	0	0	0	3	1.95E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216015975	2	18408936	C	T	-	-	-	-	-	-	45	0	0	78	23	29.48717949	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.457013575	0.728506787	2	0	0.0125	0.9875	0	0	0	0	3	3.16E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216016152	2	19800087	G	T	-	-	-	-	-	-	45	0	0	90	16	17.77777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.878431373	0.878431373	1	0	0.00375	0.99625	0	0	0	0	3	2.31E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216016553	2	23546237	C	T	-	-	-	-	-	-	43	0	0	39	14	35.8974359	243	1	0.411522634	239	17	7.112970711							4	2	2	1	NA	NA	NA	unphased	1.773755656	0.886877828	2	0	0.00375	0.99625	0	0	0	0	3	8.19E-23	1	1.14E-14	0.704192881	YES	somatic	1_1
1353824	PD9772b	1216016967	2	27104752	G	T	DPYSL5	CCDS1730.1	r.?	-	-	intronic	40	0	0	49	10	20.40816327	0	0	NA	0	0	NA							2.600886584	1	1	0.399113416	2	1	0.600886584	unphased	0.722870011	1.203005742	0.600886584	0	0	1	0	0	0	0	3	6.72E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216017377	2	29998205	C	T	ALK	CCDS33172.1	r.?	-	-	intronic	29	0	0	90	20	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	3.48E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216017478	2	30650094	G	T	-	-	-	-	-	-	21	0	0	59	16	27.11864407	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.33998006	1.33998006	1	0	0	1	0	0	0	0	3	1.37E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216017731	2	33020771	C	T	TTC27	CCDS33176.1	r.?	-	-	intronic	24	0	0	47	10	21.27659574	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.051314143	1.051314143	1	0	0.00375	0.99625	0	0	0	0	3	4.27E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216017785	2	33417742	G	T	LTBP1	CCDS33177.1	r.?	-	-	intronic	32	0	0	95	17	17.89473684	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.884210526	0.884210526	1	0	0	1	0	0	0	0	3	1.35E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216017802	2	33598672	A	T	LTBP1	CCDS33177.1	r.?	-	-	intronic	48	0	0	75	15	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0	1	0	0	0	0	3	5.25E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216018009	2	35153983	A	T	-	-	-	-	-	-	44	0	0	91	21	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	7.54E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216018165	2	36442938	C	T	-	-	-	-	-	-	42	0	0	64	13	20.3125	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.003676471	1.003676471	1	0	0	1	0	0	0	0	3	1.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216018709	2	39879086	C	T	-	-	-	-	-	-	41	0	0	66	9	13.63636364	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.673796791	0.673796791	1	0.00125	0.04375	0.955	0	0	0	0	3	5.59E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216018713	2	39926711	C	T	TMEM178	CCDS1804.1	r.?	-	-	intronic	41	0	0	85	17	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0	1	0	0	0	0	3	1.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216018754	2	40353760	G	T	SLC8A1	CCDS1806.1	r.?	-	-	intronic	25	0	0	74	16	21.62162162	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06836248	1.06836248	1	0	0.0025	0.9975	0	0	0	0	3	7.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216018790	2	40600102	A	T	SLC8A1	CCDS1806.1	r.?	-	-	intronic	25	0	0	78	21	26.92307692	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.330316742	1.330316742	1	0	0	1	0	0	0	0	3	1.99E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216019178	2	43550988	C	T	THADA	CCDS46268.1	r.?	-	-	intronic	18	0	0	94	31	32.9787234	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.629536921	0.814768461	2	0	0.00375	0.99625	0	0	0	0	3	2.29E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1216019184	2	43658470	C	T	THADA	CCDS46268.1	r.?	-	-	intronic	34	0	0	39	10	25.64102564	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.266968326	1.266968326	1	0	0.00125	0.99875	0	0	0	0	3	5.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216019617	2	47081064	C	T	ENSG00000239332	ENST00000422294	r.?	-	-	intronic	30	0	0	72	11	15.27777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.754901961	0.754901961	1	0	0.01125	0.98875	0	0	0	0	3	1.12E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216019860	2	48895834	C	T	STON1-GTF2A1L	CCDS1840.1	r.?	-	-	intronic	31	0	0	17	6	35.29411765	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.743944637	1.743944637	1	0	0.0025	0.9975	0	0	0	0	3	1.84E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216020092	2	51015783	C	T	NRXN1	CCDS46282.1	r.?	-	-	intronic	35	0	0	50	14	28	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.383529412	1.383529412	1	0	0	1	0	0	0	0	3	4.84E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216020322	2	52879075	G	T	-	-	-	-	-	-	44	0	0	72	12	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.00625	0.99375	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216020332	2	53004886	C	T	-	-	-	-	-	-	33	0	0	81	15	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.00125	0.99875	0	0	0	0	3	1.82E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216020381	2	53501583	A	T	-	-	-	-	-	-	32	0	0	79	13	16.4556962	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.813104989	0.813104989	1	0	0.00375	0.99625	0	0	0	0	3	2.37E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216020403	2	53709854	C	T	-	-	-	-	-	-	27	0	0	50	13	26	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.284705882	1.284705882	1	0	0.00125	0.99875	0	0	0	0	3	3.65E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216020517	2	54528852	C	T	ACYP2	CCDS1850.1	r.?	-	-	intronic	41	0	0	76	15	19.73684211	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0	1	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216020736	2	56078593	A	T	-	-	-	-	-	-	32	0	0	73	19	26.02739726	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.286059629	1.286059629	1	0	0	1	0	0	0	0	3	2.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216020809	2	56861279	G	T	-	-	-	-	-	-	35	0	0	88	7	7.954545455	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.393048128	0.393048128	1	0.075	0.61625	0.30875	0	0	0	0	2	3.48E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216020836	2	57225874	A	T	-	-	-	-	-	-	36	0	0	72	14	19.44444444	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.960784314	0.960784314	1	0	0.0075	0.9925	0	0	0	0	3	1.39E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216020848	2	57313679	C	T	-	-	-	-	-	-	34	0	0	77	17	22.07792208	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.090909091	1.090909091	1	0	0.00375	0.99625	0	0	0	0	3	2.82E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216020936	2	57958124	G	T	-	-	-	-	-	-	40	0	0	83	17	20.48192771	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.012048193	1.012048193	1	0	0.00125	0.99875	0	0	0	0	3	1.14E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216021350	2	61115350	C	T	REL	CCDS1864.1	r.?	-	-	intronic	27	0	0	95	21	22.10526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.092260062	1.092260062	1	0	0	1	0	0	0	0	3	2.05E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216022076	2	66446416	G	T	-	-	-	-	-	-	38	0	0	83	18	21.68674699	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.071580439	1.071580439	1	0	0	1	0	0	0	0	3	2.09E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216022622	2	70554858	G	T	-	-	-	-	-	-	47	0	0	73	14	19.17808219	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0	1	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216022686	2	71000906	G	T	FIGLA	CCDS46320.1	r.?	-	-	downstream	45	0	0	98	20	20.40816327	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.008403361	1.008403361	1	0	0.00125	0.99875	0	0	0	0	3	2.25E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216022834	2	72064659	G	T	-	-	-	-	-	-	45	0	0	81	16	19.75308642	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976034858	0.976034858	1	0	0	1	0	0	0	0	3	3.77E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216023115	2	74447829	G	T	SLC4A5	CCDS1936.1	r.?	-	-	intronic	31	0	0	7	3	42.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.117647059	2.117647059	1	0	0.01125	0.98625	0	0.00125	0	0.00125	3	4.31E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216023256	2	75765512	C	T	FAM176A	CCDS1959.1	r.?	-	-	intronic	28	0	0	56	15	26.78571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.323529412	1.323529412	1	0	0	1	0	0	0	0	3	4.09E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216023293	2	76083953	C	T	-	-	-	-	-	-	39	0	0	80	16	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.0025	0.9975	0	0	0	0	3	3.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216023308	2	76216174	C	T	-	-	-	-	-	-	32	0	0	93	18	19.35483871	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.956356736	0.956356736	1	0	0	1	0	0	0	0	3	1.95E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216023337	2	76421894	A	T	-	-	-	-	-	-	55	0	0	64	16	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	5.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216023455	2	77171859	C	T	LRRTM4	CCDS46346.1	r.?	-	-	intronic	32	0	0	49	7	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.0025	0.03125	0.96625	0	0	0	0	3	5.58E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216023748	2	79530958	G	T	CTNNA2	CCDS42703.2	r.?	-	-	intronic	33	0	0	77	10	12.98701299	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.64171123	0.64171123	1	0	0.07125	0.92875	0	0	0	0	3	7.90E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216023766	2	79752957	C	T	CTNNA2	CCDS42703.2	r.?	-	-	intronic	41	0	0	89	14	15.73033708	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.777263714	0.777263714	1	0	0.0175	0.9825	0	0	0	0	3	3.28E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216023772	2	79776904	G	T	CTNNA2	CCDS42703.2	r.?	-	-	intronic	28	0	0	77	23	29.87012987	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.475935829	0.737967914	2	0	0.01	0.99	0	0	0	0	3	2.24E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216023773	2	79776905	G	T	CTNNA2	CCDS42703.2	r.?	-	-	intronic	28	0	0	78	23	29.48717949	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.457013575	0.728506787	2	0	0.02375	0.97625	0	0	0	0	3	3.16E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216024107	2	82398481	A	T	-	-	-	-	-	-	28	0	0	64	12	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.0025	0.9975	0	0	0	0	3	6.30E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216024211	2	83091238	A	T	-	-	-	-	-	-	40	0	0	82	20	24.3902439	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0	1	0	0	0	0	3	4.40E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216024270	2	83507215	A	T	-	-	-	-	-	-	31	0	0	80	14	17.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.864705882	0.864705882	1	0	0.00625	0.99375	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216024346	2	84212977	G	T	-	-	-	-	-	-	41	1	2.43902439	78	18	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	6.10E-25	0.18577148	1	1	NA	NA	NA
1353824	PD9772b	1216024421	2	84801813	A	T	DNAH6	CCDS46348.1	r.?	-	-	intronic	39	0	0	67	19	28.35820896	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.401229148	1.401229148	1	0	0	1	0	0	0	0	3	3.67E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216024447	2	85037465	G	T	DNAH6	CCDS46348.1	r.?	-	-	intronic	31	0	0	50	12	24	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.185882353	1.185882353	1	0	0	1	0	0	0	0	3	2.49E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216024524	2	85593666	C	T	ELMOD3	CCDS1973.1	r.?	-	-	intronic	25	0	0	73	15	20.54794521	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.015310234	1.015310234	1	0	0	1	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216028818	2	95906012	C	T	-	-	-	-	-	-	31	0	0	41	9	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0.00375	0.99625	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216029503	2	98336803	G	T	ZAP70	CCDS33254.1	r.?	-	-	intronic	30	0	0	20	5	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.0075	0.9925	0	0	0	0	3	4.55E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216029622	2	99360284	G	T	-	-	-	-	-	-	27	0	0	70	12	17.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.847058824	0.847058824	1	0	0.005	0.995	0	0	0	0	3	1.99E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216029896	2	101666074	C	T	TBC1D8	CCDS46375.1	r.?	-	-	intronic	35	0	0	22	8	36.36363636	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.796791444	1.796791444	1	0	0	1	0	0	0	0	3	1.17E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216030171	2	104195130	C	T	-	-	-	-	-	-	32	0	0	89	21	23.59550562	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.165895572	1.165895572	1	0	0	1	0	0	0	0	3	4.49E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216030246	2	104616551	A	T	-	-	-	-	-	-	36	0	0	71	14	19.71830986	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.974316487	0.974316487	1	0	0	1	0	0	0	0	3	1.13E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216030371	2	105860612	C	T	GPR45	CCDS2066.1	r.?	-	-	downstream	32	0	0	31	9	29.03225806	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.434535104	1.434535104	1	0	0	1	0	0	0	0	3	3.57E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216030597	2	107597777	C	T	-	-	-	-	-	-	41	0	0	79	21	26.58227848	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.31347729	1.31347729	1	0	0	1	0	0	0	0	3	2.69E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216030609	2	107750969	G	T	-	-	-	-	-	-	27	0	0	84	7	8.333333333	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.411764706	0.411764706	1	0.06625	0.54	0.39375	0	0	0	0	2	2.53E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216030738	2	108790747	A	T	-	-	-	-	-	-	28	0	0	62	16	25.80645161	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.275142315	1.275142315	1	0	0	1	0	0	0	0	3	3.36E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216030963	2	110939208	A	T	NPHP1	CCDS2086.1	r.?	-	-	intronic	42	0	0	82	20	24.3902439	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.205164993	1.205164993	1	0	0	1	0	0	0	0	3	4.40E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216031212	2	112731596	A	T	MERTK	CCDS2094.1	r.?	-	-	intronic	27	0	0	58	5	8.620689655	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.425963489	0.425963489	1	0.03125	0.2825	0.68625	0	0	0	0	3	1.15E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216031408	2	114072406	G	T	-	-	-	-	-	-	39	0	0	68	15	22.05882353	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.089965398	1.089965398	1	0	0.0025	0.9975	0	0	0	0	3	1.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216031675	2	114823416	A	T	-	-	-	-	-	-	37	0	0	77	11	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0	0.025	0.975	0	0	0	0	3	2.41E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216031808	2	116013016	G	T	DPP10	CCDS46400.1	r.?	-	-	intronic	44	0	0	39	7	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.01125	0.98875	0	0	0	0	3	1.04E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216031828	2	116144899	C	T	DPP10	CCDS46400.1	r.?	-	-	intronic	41	0	0	70	11	15.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.776470588	0.776470588	1	0	0.015	0.985	0	0	0	0	3	8.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216031846	2	116216503	G	T	DPP10	CCDS46400.1	r.?	-	-	intronic	27	0	0	65	15	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0.00125	0.99875	0	0	0	0	3	5.00E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216031930	2	116764669	C	T	-	-	-	-	-	-	43	0	0	66	18	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	2.08E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216031975	2	117134763	A	T	-	-	-	-	-	-	42	0	0	78	17	21.79487179	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.076923077	1.076923077	1	0	0	1	0	0	0	0	3	3.59E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216032029	2	117531571	C	T	-	-	-	-	-	-	41	0	0	37	10	27.02702703	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.3354531	1.3354531	1	0	0.00125	0.99875	0	0	0	0	3	3.01E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216032040	2	117624312	A	T	-	-	-	-	-	-	29	0	0	77	16	20.77922078	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.026737968	1.026737968	1	0	0.00125	0.99875	0	0	0	0	3	1.56E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216032351	2	119851056	C	T	-	-	-	-	-	-	35	0	0	73	11	15.06849315	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.744560838	0.744560838	1	0	0.02125	0.97875	0	0	0	0	3	1.31E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216032487	2	120838561	G	T	EPB41L5	CCDS2130.1	r.?	-	-	intronic	31	0	0	73	10	13.69863014	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.676873489	0.676873489	1	0.00125	0.04125	0.9575	0	0	0	0	3	4.56E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216032760	2	123050134	G	T	-	-	-	-	-	-	41	0	0	69	12	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.0075	0.9925	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216032961	2	124482342	C	T	-	-	-	-	-	-	33	0	0	76	11	14.47368421	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.715170279	0.715170279	1	0	0.02875	0.97125	0	0	0	0	3	2.08E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216033026	2	125078873	A	T	CNTNAP5	CCDS46401.1	r.?	-	-	intronic	35	0	0	46	8	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.015	0.985	0	0	0	0	3	8.61E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216033140	2	126112837	G	T	-	-	-	-	-	-	23	0	0	49	12	24.48979592	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.965186074	0.965186074	1	0	0.0025	0.9975	0	0	0	0	3	1.90E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216033310	2	128229740	G	T	-	-	-	-	-	-	35	0	0	57	13	22.80701754	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.898864809	0.898864809	1	0	0.00125	0.99875	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216033716	2	132127205	A	T	-	-	-	-	-	-	26	0	0	54	16	29.62962963	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.167755991	1.167755991	1	0	0.00125	0.99875	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216035576	2	133098187	C	T	-	-	-	-	-	-	76	0	0	90	8	8.888888889	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.350326797	0.350326797	1	0.19625	0.735	0.06875	0	0	0	0	2	2.10E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216036063	2	137464113	C	T	-	-	-	-	-	-	38	0	0	69	23	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	1.15E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216036157	2	138179666	C	T	THSD7B	ENST00000409968	r.?	-	-	intronic	49	0	0	67	13	19.40298507	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.02125	0.97875	0	0	0	0	3	2.41E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216036507	2	141392918	G	T	LRP1B	CCDS2182.1	r.?	-	-	intronic	37	0	0	67	16	23.88059701	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0	1	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216036658	2	142486068	G	T	LRP1B	CCDS2182.1	r.?	-	-	intronic	29	0	0	60	9	15	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.591176471	0.591176471	1	0.00625	0.11875	0.875	0	0	0	0	3	2.29E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216037130	2	147361392	G	T	-	-	-	-	-	-	49	0	0	49	12	24.48979592	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.965186074	0.965186074	1	0	0.00125	0.99875	0	0	0	0	3	1.90E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216037186	2	147883045	C	T	-	-	-	-	-	-	30	0	0	23	5	21.73913043	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.856777494	0.856777494	1	0	0.02	0.98	0	0	0	0	3	9.75E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216037374	2	149901556	C	T	LYPD6B	CCDS46423.1	r.?	-	-	intronic	34	0	0	98	54	55.10204082	0	0	NA	0	0	NA							5	4	1	1	NA	NA	NA	unphased	3.273709484	1.091236495	3	0	0	1	0	0	0	0	3	6.87E-97	1	1	1	NA	NA	NA
1353824	PD9772b	1216037591	2	151578502	C	T	-	-	-	-	-	-	29	0	0	51	13	25.49019608	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.00461361	1.00461361	1	0	0.00125	0.99875	0	0	0	0	3	4.87E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216037592	2	151581179	C	T	-	-	-	-	-	-	36	0	0	61	14	22.95081967	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.904532305	0.904532305	1	0	0.00125	0.99875	0	0	0	0	3	1.10E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216037754	2	153095481	G	T	-	-	-	-	-	-	38	0	0	48	11	22.91666667	127	0	0	54	10	18.51851852							3	2	1	1	NA	NA	NA	unphased	0.903186275	0.903186275	1	0	0.0075	0.9925	0	0	0	0	3	9.31E-16	1	1.91E-13	1	YES	somatic	1_1
1353824	PD9772b	1216037776	2	153239722	G	T	FMNL2	CCDS46429.1	r.?	-	-	intronic	29	0	0	63	13	20.63492063	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.813258637	0.813258637	1	0	0.01	0.99	0	0	0	0	3	1.01E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216037781	2	153314309	G	T	FMNL2	CCDS46429.1	r.?	-	-	intronic	33	0	0	65	16	24.61538462	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.970135747	0.970135747	1	0	0.00375	0.99625	0	0	0	0	3	7.85E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216037933	2	155058537	G	T	GALNT13	CCDS2199.1	r.?	-	-	intronic	39	0	0	55	15	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0	1	0	0	0	0	3	3.01E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216038804	2	165087685	C	T	-	-	-	-	-	-	35	0	0	51	14	27.45098039	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.08189158	1.08189158	1	0	0.00125	0.99875	0	0	0	0	3	6.64E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216038993	2	167361574	A	T	-	-	-	-	-	-	34	0	0	64	17	26.5625	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.046875	1.046875	1	0	0	1	0	0	0	0	3	8.43E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216040058	2	177542774	G	T	-	-	-	-	-	-	35	0	0	92	15	16.30434783	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.805626598	0.805626598	1	0	0.01125	0.98875	0	0	0	0	3	1.39E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216040329	2	179217388	C	T	OSBPL6	CCDS2277.1	r.?	-	-	intronic	37	0	0	53	18	33.96226415	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.678135405	0.839067703	2	0	0.0025	0.9975	0	0	0	0	3	2.09E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216040406	2	179841694	G	T	CCDC141	ENST00000409284	r.?	-	-	intronic	31	0	0	48	10	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.0025	0.9975	0	0	0	0	3	5.37E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216040683	2	182058497	G	T	-	-	-	-	-	-	34	0	0	86	20	23.25581395	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.149110807	1.149110807	1	0	0	1	0	0	0	0	3	1.27E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216040861	2	183695788	C	T	FRZB	CCDS2286.1	r.?	-	-	downstream	27	0	0	91	19	20.87912088	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.031674208	1.031674208	1	0	0.00125	0.99875	0	0	0	0	3	2.46E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216041009	2	184814195	G	T	-	-	-	-	-	-	40	0	0	80	20	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	2.53E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216041070	2	185325552	G	T	-	-	-	-	-	-	40	0	0	86	21	24.41860465	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.206566347	1.206566347	1	0	0	1	0	0	0	0	3	2.01E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216041182	2	186350828	G	T	-	-	-	-	-	-	32	0	0	83	16	19.27710843	194	0	0	394	64	16.24365482							4	2	2	1	NA	NA	NA	unphased	0.952515946	0.952515946	1	0	0	1	0	0	0	0	3	5.75E-21	1	4.82E-74	1	YES	somatic	1_1
1353824	PD9772b	1216041368	2	187775245	C	T	-	-	-	-	-	-	38	0	0	90	12	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0	0.05375	0.94625	0	0	0	0	3	4.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216041376	2	187807133	C	T	-	-	-	-	-	-	44	0	0	71	12	16.90140845	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.835128418	0.835128418	1	0	0.00875	0.99125	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216041402	2	188031258	A	T	-	-	-	-	-	-	36	0	0	83	13	15.6626506	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.773919206	0.773919206	1	0	0.0125	0.9875	0	0	0	0	3	4.66E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216041546	2	189037883	A	T	-	-	-	-	-	-	29	0	0	69	15	21.73913043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.074168798	1.074168798	1	0	0	1	0	0	0	0	3	1.34E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216041630	2	189773977	A	T	-	-	-	-	-	-	28	0	0	84	24	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	0.705882353	2	0	0.04	0.96	0	0	0	0	3	2.87E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216041840	2	191358212	C	T	MFSD6	CCDS2306.1	r.?	-	-	intronic	44	0	0	99	16	16.16161616	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.798573975	0.798573975	1	0.00125	0.0075	0.99125	0	0	0	0	3	1.17E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216042062	2	192923157	A	T	TMEFF2	CCDS2314.1	r.?	-	-	intronic	43	0	0	84	19	22.61904762	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.117647059	1.117647059	1	0	0	1	0	0	0	0	3	4.62E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216042345	2	195214559	C	T	-	-	-	-	-	-	38	0	0	86	15	17.44186047	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.861833105	0.861833105	1	0	0.0025	0.9975	0	0	0	0	3	4.76E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216042478	2	196386304	G	T	-	-	-	-	-	-	35	0	0	67	11	16.41791045	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.811237928	0.811237928	1	0	0.0125	0.9875	0	0	0	0	3	4.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216042694	2	198212790	G	T	-	-	-	-	-	-	32	0	0	55	12	21.81818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.078074866	1.078074866	1	0	0	1	0	0	0	0	3	8.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216042960	2	199903752	A	T	-	-	-	-	-	-	29	0	0	60	9	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.0225	0.9775	0	0	0	0	3	2.29E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216043133	2	201283582	A	T	SPATS2L	CCDS46483.1	r.?	-	-	intronic	30	0	0	57	11	19.29824561	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.953560372	0.953560372	1	0	0.00875	0.99125	0	0	0	0	3	7.29E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216043148	2	201486249	G	T	AOX1	CCDS33360.1	r.?	-	-	intronic	27	0	0	98	16	16.32653061	162	0	0	191	25	13.08900524							4	2	2	1	NA	NA	NA	unphased	0.806722689	0.806722689	1	0	0.00125	0.99875	0	0	0	0	3	9.83E-20	1	1.77E-27	1	YES	somatic	1_1
1353824	PD9772b	1216043180	2	201670123	A	T	-	-	-	-	-	-	31	0	0	67	9	13.43283582	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.663740123	0.663740123	1	0.00125	0.04375	0.955	0	0	0	0	3	6.43E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216043245	2	202079003	G	T	CASP10	CCDS2340.1	r.?	-	-	intronic	34	0	0	87	15	17.24137931	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.851926978	0.851926978	1	0	0.00625	0.99375	0	0	0	0	3	5.73E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216043260	2	202221907	C	T	ALS2CR12	CCDS2346.1	r.195g>a	c.?	p.?	5'UTR variant	33	0	0	81	13	16.04938272	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.793028322	0.793028322	1	0	0.01125	0.98875	0	0	0	0	3	3.34E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216043764	2	206043753	G	T	PARD3B	CCDS42806.1	r.?	-	-	intronic	15	0	0	56	10	17.85714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.703781513	0.703781513	1	0	0.04	0.96	0	0	0	0	3	2.82E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216043991	2	208338830	G	T	-	-	-	-	-	-	35	0	0	40	12	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0.0025	0.9975	0	0	0	0	3	1.20E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216044241	2	210782438	C	T	UNC80	CCDS46504.1	r.?	-	-	intronic	36	0	0	37	11	29.72972973	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.171701113	1.171701113	1	0	0.0025	0.9975	0	0	0	0	3	3.70E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216044310	2	211633825	A	T	-	-	-	-	-	-	34	1	2.941176471	63	17	26.98412698	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.063492063	1.063492063	1	0	0	1	0	0	0	0	3	6.22E-25	0.156694864	1	1	NA	NA	NA
1353824	PD9772b	1216044347	2	212077492	C	T	-	-	-	-	-	-	47	0	0	46	13	28.26086957	115	0	0	107	22	20.56074766							3	2	1	1	NA	NA	NA	unphased	1.113810742	1.113810742	1	0	0.00125	0.99875	0	0	0	0	3	1.07E-19	1	6.15E-29	1	YES	somatic	1_1
1353824	PD9772b	1216044749	2	215910312	C	T	ABCA12	CCDS33372.1	r.?	-	-	intronic	32	0	0	54	10	18.51851852	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.729847495	0.729847495	1	0	0.015	0.985	0	0	0	0	3	1.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216044950	2	217712081	C	T	-	-	-	-	-	-	42	0	0	65	15	23.07692308	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.909502262	0.909502262	1	0	0.00375	0.99625	0	0	0	0	3	5.00E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216044964	2	217891249	C	T	-	-	-	-	-	-	34	0	0	61	19	31.14754098	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.227579556	1.227579556	1	0	0	1	0	0	0	0	3	4.64E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216045125	2	219614162	G	T	TTLL4	CCDS2422.1	r.?	-	-	intronic	28	0	0	21	7	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.00375	0.99625	0	0	0	0	3	8.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216045403	2	222696202	G	T	-	-	-	-	-	-	44	0	0	61	6	9.836065574	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.387656702	0.387656702	1	0.09	0.54125	0.36875	0	0	0	0	2	6.85E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216045610	2	224406375	A	T	-	-	-	-	-	-	48	0	0	73	21	28.76712329	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.133763094	1.133763094	1	0	0	1	0	0	0	0	3	4.03E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216045730	2	225397453	G	T	CUL3	CCDS2462.1	r.?	-	-	intronic	36	0	0	61	17	27.86885246	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.098360656	1.098360656	1	0	0	1	0	0	0	0	3	3.33E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216045869	2	227086473	C	T	-	-	-	-	-	-	28	0	0	48	13	27.08333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.067401961	1.067401961	1	0	0	1	0	0	0	0	3	2.00E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216045927	2	227691756	C	T	-	-	-	-	-	-	35	0	0	56	12	21.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.844537815	0.844537815	1	0	0.0125	0.9875	0	0	0	0	3	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216046193	2	230451422	G	T	DNER	CCDS33390.1	r.?	-	-	intronic	25	0	0	35	8	22.85714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.900840336	0.900840336	1	0	0.00625	0.99375	0	0	0	0	3	8.15E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216046301	2	231444342	C	T	-	-	-	-	-	-	33	0	0	45	17	37.77777778	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.488888889	0.744444444	2	0	0.01375	0.98625	0	0	0	0	3	7.37E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216046347	2	232007237	A	T	PSMD1	CCDS2482.1	r.?	-	-	intronic	35	0	0	60	15	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216046355	2	232129725	C	T	ARMC9	CCDS2484.1	r.?	-	-	intronic	26	0	0	25	9	36	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.418823529	1.418823529	1	0	0.00125	0.99875	0	0	0	0	3	3.71E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216046571	2	233712148	C	T	GIGYF2	CCDS46542.1	r.3840c>u	c.3614C>T	p.A1205V	missense	30	0	0	27	6	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.0075	0.9925	0	0	0	0	3	4.23E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216046804	2	236156325	G	T	-	-	-	-	-	-	51	0	0	67	17	25.37313433	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1	1	1	0	0.00125	0.99875	0	0	0	0	3	2.03E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216047218	2	241529086	C	T	CAPN10	CCDS42838.1	r.?	-	-	intronic	32	0	0	9	3	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0.0175	0.9825	0	0	0	0	3	1.03E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216047519	20	1487209	C	T	-	-	-	-	-	-	38	0	0	66	32	48.48484848	0	0	NA	0	0	NA							2.610339761	2	0	0.389660239	2	1	0.610339761	unphased	1.721947264	0.860973632	2	0	0	1	0	0	0	0	3	1.38E-55	1	1	1	NA	NA	NA
1353824	PD9772b	1216047531	20	1657102	G	T	-	-	-	-	-	-	34	0	0	74	24	32.43243243	0	0	NA	0	0	NA							2.610339761	2	0	0.389660239	2	1	0.610339761	unphased	1.151843102	1.151843102	1	0	0	1	0	0	0	0	3	8.21E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216047606	20	2361258	A	T	TGM6	CCDS13025.1	r.?	-	-	upstream	31	0	0	21	7	33.33333333	0	0	NA	0	0	NA							2.610339761	2	0	0.389660239	2	1	0.610339761	unphased	1.183838744	1.183838744	1	0	0.00375	0.99625	0	0	0	0	3	8.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216047660	20	2683525	A	T	EBF4	CCDS46573.1	r.?	-	-	intronic	27	0	0	38	9	23.68421053	0	0	NA	0	0	NA							2.610339761	2	0	0.389660239	2	1	0.610339761	unphased	0.841148581	0.841148581	1	0	0.0075	0.9925	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216048003	20	5810778	C	T	C20orf196	CCDS13091.1	r.?	-	-	intronic	39	0	0	47	12	25.53191489	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.006257822	1.006257822	1	0	0.00125	0.99875	0	0	0	0	3	1.09E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216048766	20	13821892	A	T	-	-	-	-	-	-	37	0	0	39	10	25.64102564	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.010558069	1.010558069	1	0	0.00375	0.99625	0	0	0	0	3	5.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216048930	20	15226377	C	T	MACROD2	CCDS13120.2	r.?	-	-	intronic	42	0	0	57	15	26.31578947	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.037151703	1.037151703	1	0	0	1	0	0	0	0	3	5.53E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216048984	20	15934727	G	T	MACROD2	CCDS13120.2	r.?	-	-	intronic	30	0	0	61	11	18.03278689	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.710703954	0.710703954	1	0	0.01125	0.98875	0	0	0	0	3	1.62E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216049222	20	18229386	C	T	-	-	-	-	-	-	37	0	0	62	12	19.35483871	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.762808349	0.762808349	1	0	0.01875	0.98125	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216049487	20	21405580	G	T	-	-	-	-	-	-	23	0	0	48	10	20.83333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.821078431	0.821078431	1	0	0.01375	0.98625	0	0	0	0	3	5.37E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216049527	20	21895925	A	T	-	-	-	-	-	-	19	0	0	40	5	12.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.492647059	0.492647059	1	0.015	0.1625	0.8225	0	0	0	0	3	1.78E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216049791	20	24850145	C	T	-	-	-	-	-	-	35	0	0	59	16	27.11864407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.068793619	1.068793619	1	0	0.00125	0.99875	0	0	0	0	3	1.37E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216050808	20	25969002	C	T	-	-	-	-	-	-	32	0	0	29	7	24.13793103	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.951318458	0.951318458	1	0.00125	0.0125	0.98625	0	0	0	0	3	1.11E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216055417	20	35235022	G	T	C20orf24	CCDS13280.1	r.?	-	-	intronic	33	0	0	41	13	31.70731707	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.24964132	1.24964132	1	0	0	1	0	0	0	0	3	1.89E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216056054	20	42735259	C	T	-	-	-	-	-	-	27	0	0	73	15	20.54794521	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.809830782	0.809830782	1	0	0.01125	0.98875	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216056183	20	44542906	G	T	PLTP	CCDS13386.1	r.?	-	-	upstream	29	0	0	37	6	16.21621622	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.639109698	0.639109698	1	0.00125	0.0575	0.94125	0	0	0	0	3	3.18E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216056394	20	46966839	A	T	-	-	-	-	-	-	39	0	0	49	16	32.65306122	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.286914766	1.286914766	1	0	0	1	0	0	0	0	3	4.37E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216056800	20	51186475	A	T	-	-	-	-	-	-	45	0	0	81	26	32.09876543	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.265068991	1.265068991	1	0	0	1	0	0	0	0	3	1.29E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216056870	20	51929735	G	T	TSHZ2	CCDS33490.1	r.?	-	-	intronic	32	0	0	79	22	27.84810127	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.097542815	1.097542815	1	0	0	1	0	0	0	0	3	3.56E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216057049	20	53209444	C	T	DOK5	CCDS13446.1	r.?	-	-	intronic	53	0	0	51	18	35.29411765	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.39100346	1.39100346	1	0	0	1	0	0	0	0	3	9.10E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216057103	20	53682155	C	T	-	-	-	-	-	-	35	0	0	77	22	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	1.86E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216057105	20	53708089	G	T	-	-	-	-	-	-	38	0	0	64	16	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	5.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216057562	20	58801627	C	T	-	-	-	-	-	-	35	0	0	40	7	17.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.689705882	0.689705882	1	0.00125	0.04625	0.9525	0	0	0	0	3	1.26E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216068324	21	14503945	C	T	-	-	-	-	-	-	22	0	0	33	4	12.12121212	0	0	NA	0	0	NA							2.450190455	1	1	0.549809545	2	1	0.450190455	unphased	0.411074779	0.913113048	0.450190455	0	0.02	0.98	0	0	0	0	3	2.28E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216068466	21	14699514	A	T	-	-	-	-	-	-	39	0	0	77	20	25.97402597	0	0	NA	0	0	NA							2.450190455	1	1	0.549809545	2	1	0.450190455	unphased	0.880874526	0.880874526	1	0	0.00375	0.99625	0	0	0	0	3	1.07E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216068570	21	14893822	G	T	-	-	-	-	-	-	44	0	0	74	13	17.56756757	0	0	NA	0	0	NA							2.450190455	1	1	0.549809545	2	1	0.450190455	unphased	0.595780676	1.323396951	0.450190455	0	0	1	0	0	0	0	3	9.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216069239	21	17640929	A	T	-	-	-	-	-	-	54	0	0	74	16	21.62162162	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06836248	1.06836248	1	0	0	1	0	0	0	0	3	7.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216069312	21	18220428	A	T	-	-	-	-	-	-	39	0	0	83	21	25.30120482	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.250177179	1.250177179	1	0	0	1	0	0	0	0	3	8.70E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216069391	21	18770633	A	T	-	-	-	-	-	-	29	0	0	64	9	14.0625	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.694852941	0.694852941	1	0.00125	0.0425	0.95625	0	0	0	0	3	4.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216069679	21	20875386	A	T	-	-	-	-	-	-	49	0	0	77	22	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	0.705882353	2	0	0.0475	0.9525	0	0	0	0	3	1.86E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216069888	21	22432075	C	T	NCAM2	CCDS42910.1	r.?	-	-	intronic	39	0	0	73	12	16.43835616	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.812248187	0.812248187	1	0	0.01375	0.98625	0	0	0	0	3	3.39E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216070418	21	26129448	G	T	-	-	-	-	-	-	45	0	0	60	8	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0.00125	0.0525	0.94625	0	0	0	0	3	7.93E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216070447	21	26322329	A	T	-	-	-	-	-	-	34	0	0	75	14	18.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0.00125	0.99875	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216070653	21	27720242	A	T	-	-	-	-	-	-	34	0	0	69	24	34.7826087	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.718670077	0.859335038	2	0	0	1	0	0	0	0	3	1.11E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216070682	21	27981185	C	T	-	-	-	-	-	-	41	0	0	73	15	20.54794521	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.015310234	1.015310234	1	0	0.0025	0.9975	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216071190	21	31660281	C	T	KRTAP25-1	CCDS46640.1	r.?	-	-	downstream	39	0	0	79	15	18.98734177	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.938198064	0.938198064	1	0	0.0025	0.9975	0	0	0	0	3	1.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216071668	21	34843641	C	T	TMEM50B	CCDS13625.1	r.?	-	-	intronic	29	0	0	71	20	28.16901408	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.391880696	1.391880696	1	0	0	1	0	0	0	0	3	1.68E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216071890	21	36725198	C	T	-	-	-	-	-	-	26	0	0	90	20	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	3.48E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216072437	21	40871851	C	T	SH3BGR	CCDS13666.1	r.672+10c>u	c.594+10C>T	p.?	splice region	38	0	0	70	15	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	1.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216072456	21	40964948	C	T	B3GALT5	CCDS13667.1	r.?	-	-	intronic	32	0	0	61	8	13.1147541	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.648023144	0.648023144	1	0.00125	0.06875	0.93	0	0	0	0	3	9.09E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216072790	21	43404215	A	T	ZNF295	CCDS13678.1	r.?	-	-	downstream	39	0	0	83	14	16.86746988	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.833451453	0.833451453	1	0	0.0075	0.9925	0	0	0	0	3	1.17E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216072936	21	45026208	G	T	HSF2BP	CCDS13697.1	r.?	-	-	intronic	34	0	0	37	5	13.51351351	2	0	0	0	0	NA							0.032817529	0	0	0.967182471	1	0	0.032817529	unphased	0.131620811	0.131620811	1	0.97375	0.02625	0	0	0	0	0	1	1.19E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216072968	21	45336424	C	T	AGPAT3	CCDS13703.1	r.?	-	-	intronic	25	0	0	33	7	21.21212121	0	0	NA	0	0	NA							0.032817529	0	0	0.967182471	1	0	0.032817529	unphased	0.206604788	0.206604788	1	0.875	0.125	0	0	0	0	0	1	2.98E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216073032	21	46006320	C	T	C21orf29	CCDS13712.1	r.?	-	-	intronic	27	0	0	39	8	20.51282051	0	0	NA	0	0	NA							0.114544422	0	0	0.885455578	1	0	0.114544422	unphased	0.216558132	0.216558132	1	0.88875	0.11125	0	0	0	0	0	1	2.09E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216073062	21	46305417	C	T	ITGB2	CCDS13716.1	r.?	-	-	downstream	15	0	0	16	4	25	0	0	NA	0	0	NA							0.114544422	0	0	0.885455578	1	0	0.114544422	unphased	0.263930223	0.263930223	1	0.4	0.59625	0.00375	0	0	0	0	2	1.08E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216073120	21	47197771	C	T	PCBP3	CCDS42974.2	r.?	-	-	intronic	45	0	0	78	12	15.38461538	0	0	NA	0	0	NA							0.114544422	0	0	0.885455578	1	0	0.114544422	unphased	0.162418599	1.417952926	0.114544422	0	0	1	0	0	0	0	3	7.82E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216073473	22	16537116	A	T	-	-	-	-	-	-	29	0	0	65	15	23.07692308	0	0	NA	0	0	NA							0.35554569	0	0	0.64445431	1	0	0.35554569	unphased	0.299243576	0.841645909	0.35554569	0	0.005	0.995	0	0	0	0	3	5.00E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216073512	22	16687334	G	T	-	-	-	-	-	-	18	0	0	51	13	25.49019608	0	0	NA	0	0	NA							0.35554569	0	0	0.64445431	1	0	0.35554569	unphased	0.330537021	0.929661167	0.35554569	0	0.00125	0.99875	0	0	0	0	3	4.87E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216074806	22	17854197	G	T	CECR2	ENST00000400585	r.?	-	-	intronic	37	0	0	61	23	37.70491803	0	0	NA	0	0	NA							0.35554569	0	0	0.64445431	1	0	0.35554569	unphased	0.488928028	1.375148234	0.35554569	0	0	1	0	0	0	0	3	3.73E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216075107	22	19662139	C	T	ENSG00000227127	ENST00000447432	r.?	-	-	intronic	32	0	0	28	5	17.85714286	0	0	NA	0	0	NA							0.35554569	0	0	0.64445431	1	0	0.35554569	unphased	0.231557529	0.65127362	0.35554569	0	0.045	0.955	0	0	0	0	3	2.79E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216075654	22	24683019	G	T	CYTSA	CCDS33619.1	r.?	-	-	intronic	27	0	0	67	17	25.37313433	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.507462687	0.753731343	2	0	0.01875	0.98125	0	0	0	0	3	2.03E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216075938	22	26129627	A	T	-	-	-	-	-	-	23	0	0	23	8	34.7826087	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.066496164	1.033248082	2	0.00125	0	0.99875	0	0	0	0	3	1.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216075969	22	26304934	G	T	MYO18B	ENST00000335473	r.?	-	-	intronic	30	0	0	98	22	22.44897959	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.333733493	1.333733493	1	0	0	1	0	0	0	0	3	7.37E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216076059	22	26751919	C	T	SEZ6L	CCDS13833.1	r.?	-	-	intronic	35	0	0	67	8	11.94029851	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.709394205	0.709394205	1	0	0.0425	0.9575	0	0	0	0	3	1.96E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216076087	22	26823821	G	T	ASPHD2	CCDS13834.2	r.?	-	-	upstream	31	0	0	27	5	18.51851852	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.100217865	1.100217865	1	0	0.00625	0.99375	0	0	0	0	3	2.30E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216076224	22	27553682	A	T	-	-	-	-	-	-	15	0	0	39	7	17.94871795	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.066365008	1.066365008	1	0	0.00375	0.99625	0	0	0	0	3	1.04E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216076230	22	27609939	G	T	-	-	-	-	-	-	32	0	0	13	7	53.84615385	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	3.199095023	1.066365008	3	0	0.00375	0.99625	0	0	0	0	3	1.31E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216076370	22	28770762	C	T	TTC28	CCDS46678.1	r.?	-	-	intronic	31	0	0	30	5	16.66666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.990196078	0.990196078	1	0	0.015	0.985	0	0	0	0	3	4.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216076993	22	33917056	G	T	LARGE	CCDS13912.1	r.?	-	-	intronic	34	0	0	48	14	29.16666667	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.374176354	1.094998971	0.341713887	0	0	1	0	0	0	0	3	2.51E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216077241	22	36943036	C	T	-	-	-	-	-	-	38	0	0	39	11	28.20512821	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.36184087	1.058900104	0.341713887	0	0	1	0	0	0	0	3	7.20E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216077298	22	37832886	G	T	-	-	-	-	-	-	22	0	0	37	16	43.24324324	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.554763398	0.554763398	1	0.005	0.785	0.21	0	0	0	0	2	1.78E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216077323	22	38300087	G	T	MICALL1	CCDS13961.1	r.?	-	-	upstream	35	0	0	12	5	41.66666667	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.534537649	0.534537649	1	0.01875	0.345	0.63625	0	0	0	0	3	2.40E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216077961	22	46578469	A	T	PPARA	CCDS33669.1	r.?	-	-	intronic	42	0	0	39	8	20.51282051	0	0	NA	0	0	NA							0.341713887	0	0	0.658286113	1	0	0.341713887	unphased	0.263156996	0.770109166	0.341713887	0	0.01125	0.98875	0	0	0	0	3	2.09E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216079036	3	5232239	A	T	EDEM1	CCDS33686.1	r.?	-	-	intronic	36	0	0	68	20	29.41176471	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.15916955	1.15916955	1	0	0	1	0	0	0	0	3	6.23E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216079389	3	8492537	A	T	ENSG00000234563	ENST00000446572	r.?	-	-	intronic	34	0	0	50	11	22	2	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.867058824	0.867058824	1	0	0.0025	0.9975	0	0	0	0	3	1.52E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216079736	3	12035602	C	T	-	-	-	-	-	-	48	0	0	76	17	22.36842105	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.881578947	0.881578947	1	0	0.00125	0.99875	0	0	0	0	3	2.21E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216080159	3	16978705	C	T	PLCL2	CCDS33713.1	r.?	-	-	intronic	33	0	0	72	18	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216080297	3	18725699	C	T	-	-	-	-	-	-	34	0	0	32	8	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.01	0.99	0	0	0	0	3	3.69E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216080375	3	19656372	C	T	-	-	-	-	-	-	32	0	0	41	7	17.07317073	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.672883788	0.672883788	1	0	0.04375	0.95625	0	0	0	0	3	1.51E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216080523	3	20982128	G	T	-	-	-	-	-	-	33	0	0	67	14	20.89552239	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.00625	0.99375	0	0	0	0	3	4.66E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216080955	3	25353274	C	T	RARB	ENST00000404969	r.?	-	-	intronic	26	0	0	78	17	21.79487179	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.858974359	0.858974359	1	0	0.00125	0.99875	0	0	0	0	3	3.59E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216081363	3	29750159	G	T	RBMS3	CCDS33725.1	r.?	-	-	intronic	23	0	0	59	12	20.33898305	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.801595214	0.801595214	1	0	0.01375	0.98625	0	0	0	0	3	2.20E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216081878	3	35875942	G	T	-	-	-	-	-	-	41	0	0	58	15	25.86206897	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.019269777	1.019269777	1	0	0.00125	0.99875	0	0	0	0	3	7.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216082121	3	38068397	G	T	PLCD1	CCDS2671.1	r.?	-	-	intronic	32	0	0	75	27	36	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.778823529	0.889411765	2	0	0	1	0	0	0	0	3	1.08E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1216083267	3	49560478	C	T	DAG1	CCDS2799.1	r.?	-	-	intronic	34	0	0	55	19	34.54545455	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.361497326	1.361497326	1	0	0	1	0	0	0	0	3	4.51E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216083324	3	50525345	G	T	CACNA2D2	CCDS33763.1	r.?	-	-	intronic	37	0	0	11	3	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0.00125	0.0125	0.98625	0	0	0	0	3	2.00E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216083534	3	53345599	A	T	DCP1A	CCDS46847.1	r.?	-	-	intronic	33	0	0	58	10	17.24137931	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.679513185	0.679513185	1	0.00125	0.05	0.94875	0	0	0	0	3	4.10E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216084205	3	60097973	C	T	FHIT	CCDS2894.1	r.?	-	-	intronic	27	0	0	66	14	21.21212121	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.83600713	0.83600713	1	0	0.00875	0.99125	0	0	0	0	3	3.71E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216085110	3	69332145	A	T	FRMD4B	CCDS46863.1	r.?	-	-	intronic	33	0	0	31	9	29.03225806	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.144212524	1.144212524	1	0	0	1	0	0	0	0	3	3.57E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216085185	3	69976255	C	T	MITF	CCDS43106.1	r.?	-	-	intronic	34	0	0	65	12	18.46153846	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.72760181	0.72760181	1	0	0.02125	0.97875	0	0	0	0	3	7.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216085270	3	70921295	C	T	-	-	-	-	-	-	27	0	0	68	23	33.82352941	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.333044983	1.333044983	1	0	0	1	0	0	0	0	3	7.70E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216085322	3	71360374	G	T	FOXP1	CCDS2914.1	r.?	-	-	intronic	24	0	0	52	11	21.15384615	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.833710407	0.833710407	1	0	0.01125	0.98875	0	0	0	0	3	2.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216085449	3	72550430	G	T	-	-	-	-	-	-	29	0	0	62	15	24.19354839	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.953510436	0.953510436	1	0	0.00375	0.99625	0	0	0	0	3	2.28E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216085522	3	73196009	C	T	AC103560.1	ENST00000509224	r.?	-	-	intronic	33	0	0	29	10	34.48275862	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.359026369	1.359026369	1	0	0	0.99875	0.00125	0	0	0	3	1.79E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216085534	3	73278046	C	T	AC103560.1	ENST00000509224	r.?	-	-	intronic	42	0	0	65	15	23.07692308	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.909502262	0.909502262	1	0	0.0025	0.9975	0	0	0	0	3	5.00E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216085622	3	74066565	G	T	-	-	-	-	-	-	41	0	0	56	15	26.78571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.055672269	1.055672269	1	0	0	1	0	0	0	0	3	4.09E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216088011	3	80294076	G	T	-	-	-	-	-	-	33	0	0	49	18	36.73469388	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.447779112	0.723889556	2	0	0.02125	0.97875	0	0	0	0	3	3.80E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216088329	3	84094776	G	T	-	-	-	-	-	-	34	0	0	34	15	44.11764706	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.738754325	0.869377163	2	0	0.00125	0.99875	0	0	0	0	3	5.18E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216088501	3	85751308	A	T	CADM2	ENST00000383699	r.?	-	-	intronic	38	0	0	58	19	32.75862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.291075051	1.291075051	1	0	0	1	0	0	0	0	3	1.50E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216088760	3	88810595	A	T	-	-	-	-	-	-	35	0	0	59	20	33.89830508	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.335992024	1.335992024	1	0	0	1	0	0	0	0	3	2.21E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216089492	3	93979146	A	T	-	-	-	-	-	-	35	0	0	60	10	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.00625	0.99375	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216089634	3	95121698	C	T	-	-	-	-	-	-	45	0	0	68	16	23.52941176	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0.00125	0.99875	0	0	0	0	3	1.75E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216089752	3	95885737	C	T	-	-	-	-	-	-	45	0	0	71	12	16.90140845	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.835128418	0.835128418	1	0	0.01	0.99	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216089782	3	96042256	A	T	-	-	-	-	-	-	44	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.00625	0.99375	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216089887	3	97032222	C	T	EPHA6	CCDS46876.1	r.?	-	-	intronic	43	0	0	73	11	15.06849315	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.744560838	0.744560838	1	0	0.02125	0.97875	0	0	0	0	3	1.31E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216090124	3	98882367	A	T	-	-	-	-	-	-	33	0	0	32	7	21.875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.080882353	1.080882353	1	0	0.0075	0.9925	0	0	0	0	3	2.36E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216090250	3	100052950	G	T	NIT2	CCDS33806.1	r.?	-	-	upstream	39	0	0	42	8	19.04761905	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.00875	0.99125	0	0	0	0	3	3.96E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216090334	3	100729742	C	T	-	-	-	-	-	-	38	0	0	66	15	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0	1	0	0	0	0	3	6.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216090393	3	101060972	A	T	SENP7	CCDS2941.2	r.?	-	-	intronic	23	0	0	70	18	25.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.270588235	1.270588235	1	0	0	1	0	0	0	0	3	6.91E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216090490	3	101655335	A	T	-	-	-	-	-	-	20	0	0	50	8	16	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.950588235	0.950588235	1	0	0.01	0.99	0	0	0	0	3	1.74E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216090518	3	101780113	G	T	-	-	-	-	-	-	29	0	0	89	13	14.60674157	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.867812293	0.867812293	1	0	0.01125	0.98875	0	0	0	0	3	1.21E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216090654	3	102881822	C	T	-	-	-	-	-	-	41	0	0	72	20	27.77777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.37254902	1.37254902	1	0	0	1	0	0	0	0	3	2.32E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216090760	3	103876439	G	T	-	-	-	-	-	-	46	0	0	70	11	15.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.776470588	0.776470588	1	0	0.01375	0.98625	0	0	0	0	3	8.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216090805	3	104235966	G	T	-	-	-	-	-	-	32	0	0	57	11	19.29824561	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.953560372	0.953560372	1	0	0.005	0.995	0	0	0	0	3	7.29E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216090829	3	104408302	G	T	-	-	-	-	-	-	36	0	0	78	16	20.51282051	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.013574661	1.013574661	1	0	0	1	0	0	0	0	3	1.96E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216090948	3	105431890	G	T	CBLB	CCDS2948.1	r.?	-	-	intronic	42	0	0	79	13	16.4556962	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.813104989	0.813104989	1	0	0.00875	0.99125	0	0	0	0	3	2.37E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216091084	3	106342045	G	T	-	-	-	-	-	-	35	0	0	61	14	22.95081967	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.134040501	1.134040501	1	0	0.0025	0.9975	0	0	0	0	3	1.10E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216091242	3	107532753	C	T	BBX	CCDS2950.1	r.?	-	-	downstream	29	0	0	85	15	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.005	0.995	0	0	0	0	3	3.95E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216091350	3	108434469	G	T	-	-	-	-	-	-	31	0	0	49	11	22.44897959	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.109243697	1.109243697	1	0	0.00125	0.99875	0	0	0	0	3	1.19E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216091487	3	109615604	G	T	-	-	-	-	-	-	47	0	0	67	22	32.8358209	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.294117647	1.294117647	1	0	0	1	0	0	0	0	3	5.21E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216091615	3	110667098	C	T	-	-	-	-	-	-	40	0	0	75	18	24	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.945882353	0.945882353	1	0	0.00125	0.99875	0	0	0	0	3	2.78E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216091692	3	111485774	A	T	PHLDB2	CCDS46885.1	r.?	-	-	intronic	22	0	0	51	12	23.52941176	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.00375	0.99625	0	0	0	0	3	3.24E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216091897	3	113424121	C	T	-	-	-	-	-	-	38	0	0	62	20	32.25806452	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.271347249	1.271347249	1	0	0	1	0	0	0	0	3	7.19E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216091981	3	114402374	G	T	ZBTB20	CCDS2981.1	r.?	-	-	intronic	45	0	0	73	21	28.76712329	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.133763094	1.133763094	1	0	0	1	0	0	0	0	3	4.03E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216092053	3	115380579	C	T	GAP43	CCDS46890.1	r.?	-	-	intronic	29	0	0	22	4	18.18181818	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.71657754	0.71657754	1	0.0025	0.02375	0.97375	0	0	0	0	3	4.25E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216092205	3	116670724	A	T	LSAMP	ENST00000474851	r.?	-	-	intronic	48	0	0	60	15	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00125	0.99875	0	0	0	0	3	1.31E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216092341	3	118213360	G	T	-	-	-	-	-	-	38	0	0	62	15	24.19354839	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.953510436	0.953510436	1	0	0	1	0	0	0	0	3	2.28E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216092430	3	118972047	C	T	-	-	-	-	-	-	39	0	0	60	10	16.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.656862745	0.656862745	1	0	0.05375	0.94625	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216092583	3	120395733	C	T	HGD	CCDS3000.1	r.?	-	-	intronic	32	0	0	65	21	32.30769231	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.273303167	1.273303167	1	0	0	1	0	0	0	0	3	2.35E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216092829	3	122775368	C	T	-	-	-	-	-	-	35	0	0	29	10	34.48275862	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.359026369	1.359026369	1	0	0	1	0	0	0	0	3	1.79E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216092994	3	124524200	G	T	ITGB5	CCDS3030.1	r.?	-	-	intronic	28	0	0	54	19	35.18518519	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.38671024	1.38671024	1	0	0	1	0	0	0	0	3	2.97E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216093048	3	124987386	A	T	ZNF148	CCDS3031.1	r.?	-	-	intronic	29	0	0	67	22	32.8358209	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.294117647	1.294117647	1	0	0	1	0	0	0	0	3	5.21E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216093277	3	126241518	C	T	UROC1	CCDS3038.1	r.?	-	-	upstream	26	0	0	31	6	19.35483871	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.762808349	0.762808349	1	0.00125	0.01375	0.985	0	0	0	0	3	1.03E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216094008	3	133134559	C	T	BFSP2	CCDS33859.1	r.?	-	-	intronic	18	0	0	26	4	15.38461538	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.606334842	0.606334842	1	0.00125	0.0575	0.94125	0	0	0	0	3	8.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216094206	3	135385992	C	T	-	-	-	-	-	-	32	0	0	71	26	36.61971831	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.443247722	0.721623861	2	0	0.02875	0.97125	0	0	0	0	3	2.11E-41	1	1	1	NA	NA	NA
1353824	PD9772b	1216094700	3	141098400	G	T	ZBTB38	ENST00000509842	r.?	-	-	intronic	29	0	0	56	17	30.35714286	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.196428571	1.196428571	1	0	0.00125	0.99875	0	0	0	0	3	6.22E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216095179	3	146086670	G	T	-	-	-	-	-	-	27	0	0	69	16	23.1884058	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.913895993	0.913895993	1	0	0.0075	0.9925	0	0	0	0	3	2.27E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216095728	3	151668885	G	T	-	-	-	-	-	-	21	0	0	67	16	23.88059701	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0	1	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216095794	3	152442319	A	T	-	-	-	-	-	-	31	0	0	68	25	36.76470588	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.448961938	0.724480969	2	0	0.0225	0.9775	0	0	0	0	3	6.41E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216095999	3	154545961	G	T	-	-	-	-	-	-	24	0	0	50	16	32	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.261176471	1.261176471	1	0	0.00125	0.99875	0	0	0	0	3	6.40E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216096292	3	157630981	C	T	-	-	-	-	-	-	50	0	0	69	20	28.98550725	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.142369991	1.142369991	1	0	0	1	0	0	0	0	3	8.73E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216096478	3	159781354	A	T	-	-	-	-	-	-	35	0	0	10	3	30	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.182352941	1.182352941	1	0	0.02125	0.97875	0	0	0	0	3	1.46E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216096615	3	161481717	G	T	-	-	-	-	-	-	33	0	0	73	21	28.76712329	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.133763094	1.133763094	1	0	0	1	0	0	0	0	3	4.03E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216096631	3	161676691	A	T	-	-	-	-	-	-	45	0	0	50	19	38	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.497647059	0.748823529	2	0	0.01375	0.98625	0	0	0	0	3	5.00E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216096828	3	163403012	C	T	-	-	-	-	-	-	37	0	0	60	11	18.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.72254902	0.72254902	1	0	0.035	0.965	0	0	0	0	3	1.34E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216096875	3	163768901	C	T	-	-	-	-	-	-	29	0	0	63	17	26.98412698	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.063492063	1.063492063	1	0	0.00125	0.99875	0	0	0	0	3	6.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216096890	3	163992940	A	T	-	-	-	-	-	-	40	0	0	54	11	20.37037037	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.802832244	0.802832244	1	0	0.01	0.99	0	0	0	0	3	3.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216096940	3	164379764	G	T	-	-	-	-	-	-	40	0	0	62	12	19.35483871	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.762808349	0.762808349	1	0	0.0175	0.9825	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216097224	3	167704739	C	T	-	-	-	-	-	-	28	0	0	85	17	20	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.788235294	0.788235294	1	0	0.005	0.995	0	0	0	0	3	1.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216097243	3	168055417	G	T	-	-	-	-	-	-	29	0	0	68	20	29.41176471	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.15916955	1.15916955	1	0	0.00125	0.99875	0	0	0	0	3	6.23E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216097422	3	170381033	G	T	CLDN11	ENST00000486975	r.?	-	-	intronic	30	0	0	74	7	9.459459459	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.37281399	0.37281399	1	0.12	0.7075	0.1725	0	0	0	0	2	1.05E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216097700	3	173391236	A	T	NLGN1	CCDS3222.1	r.?	-	-	intronic	44	0	0	55	21	38.18181818	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.504812834	0.752406417	2	0	0.01625	0.98375	0	0	0	0	3	3.41E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216097738	3	173774795	C	T	NLGN1	CCDS3222.1	r.?	-	-	intronic	23	0	0	67	17	25.37313433	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1	1	1	0	0.00125	0.99875	0	0	0	0	3	2.03E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216097810	3	174559693	C	T	NAALADL2	ENST00000434257	r.?	-	-	intronic	31	0	0	59	10	16.94915254	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.667996012	0.667996012	1	0.00125	0.03875	0.96	0	0	0	0	3	4.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216098080	3	177242558	C	T	-	-	-	-	-	-	32	0	0	62	15	24.19354839	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.953510436	0.953510436	1	0	0.00125	0.99875	0	0	0	0	3	2.28E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216098099	3	177376641	C	T	-	-	-	-	-	-	35	0	0	74	16	21.62162162	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.852146264	0.852146264	1	0	0.005	0.995	0	0	0	0	3	7.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216098289	3	179263805	G	T	-	-	-	-	-	-	38	0	0	87	42	48.27586207	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.385395538	1.192697769	2	0	0	1	0	0	0	0	3	2.29E-72	1	1	1	NA	NA	NA
1353824	PD9772b	1216098481	3	180810099	G	T	-	-	-	-	-	-	29	0	0	57	13	22.80701754	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.898864809	0.898864809	1	0	0.0025	0.9975	0	0	0	0	3	2.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216098796	3	184143630	C	T	EIF2B5	ENST00000444495	r.?	-	-	intronic	37	0	0	42	12	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	2.35E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216099468	3	189508617	A	T	TP63	CCDS3293.1	r.?	-	-	intronic	36	0	0	92	17	18.47826087	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.913043478	0.913043478	1	0	0	1	0	0	0	0	3	7.54E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216099527	3	189894699	G	T	-	-	-	-	-	-	22	0	0	37	8	21.62162162	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.06836248	1.06836248	1	0	0.0075	0.9925	0	0	0	0	3	1.33E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216099585	3	190278437	G	T	IL1RAP	CCDS3298.1	r.?	-	-	intronic	42	0	0	66	17	25.75757576	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.272727273	1.272727273	1	0	0	1	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216099597	3	190401052	C	T	-	-	-	-	-	-	38	0	0	89	15	16.85393258	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.832782551	0.832782551	1	0	0.01	0.99	0	0	0	0	3	8.23E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216099651	3	190852330	A	T	-	-	-	-	-	-	32	0	0	76	14	18.42105263	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.910216718	0.910216718	1	0	0.0025	0.9975	0	0	0	0	3	3.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216099825	3	192121020	C	T	FGF12	CCDS3301.1	r.?	-	-	intronic	44	0	0	88	17	19.31818182	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.954545455	0.954545455	1	0	0.00125	0.99875	0	0	0	0	3	3.34E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216099956	3	193219671	C	T	ATP13A4	CCDS3304.2	r.?	-	-	intronic	44	0	0	68	9	13.23529412	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.653979239	0.653979239	1	0	0.05875	0.94125	0	0	0	0	3	7.38E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216100781	3	197161453	G	T	-	-	-	-	-	-	38	0	0	57	12	21.05263158	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0.0025	0.9975	0	0	0	0	3	1.40E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216101119	4	267944	A	T	ENSG00000186777	CCDS46990.1	r.?	-	-	intronic	39	0	0	72	12	16.66666667	0	0	NA	0	0	NA							0.469229117	0	0	0.530770883	1	0	0.469229117	unphased	0.235067598	0.235067598	1	0.8875	0.1125	0	0	0	0	0	1	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216101359	4	2701905	G	T	FAM193A	CCDS33943.1	r.3484g>u	c.3133G>T	p.G1045C	missense	25	0	0	20	6	30	0	0	NA	0	0	NA							0.469229117	0	0	0.530770883	1	0	0.469229117	unphased	0.423121676	0.423121676	1	0.08625	0.7425	0.17125	0	0	0	0	2	5.70E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216101769	4	5758268	C	T	EVC	CCDS3383.1	r.?	-	-	intronic	36	0	0	8	3	37.5	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.477941176	1.477941176	1	0.00125	0.0075	0.99125	0	0	0	0	3	6.87E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216102495	4	12649601	G	T	-	-	-	-	-	-	39	0	0	88	21	23.86363636	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.940508021	0.940508021	1	0	0	1	0	0	0	0	3	3.45E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216102550	4	13176244	C	T	-	-	-	-	-	-	27	0	0	61	11	18.03278689	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.710703954	0.710703954	1	0	0.03875	0.96125	0	0	0	0	3	1.62E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216102603	4	13795522	A	T	-	-	-	-	-	-	27	0	0	59	22	37.28813559	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.469591226	0.734795613	2	0	0.01875	0.98125	0	0	0	0	3	1.79E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216102839	4	16387909	C	T	-	-	-	-	-	-	34	0	0	41	12	29.26829268	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.153515065	1.153515065	1	0	0	1	0	0	0	0	3	1.69E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216102899	4	16940446	C	T	-	-	-	-	-	-	25	0	0	51	12	23.52941176	230	0	0	98	19	19.3877551							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0.00125	0.0025	0.99625	0	0	0	0	3	3.24E-17	1	1.13E-24	1	YES	somatic	1_1
1353824	PD9772b	1216102900	4	16940541	A	T	-	-	-	-	-	-	30	0	0	57	16	28.07017544	140	0	0	54	15	27.77777778							3	2	1	1	NA	NA	NA	unphased	1.10629515	1.10629515	1	0	0	1	0	0	0	0	3	7.28E-24	1	2.20E-22	1	YES	somatic	1_1
1353824	PD9772b	1216103035	4	18555865	A	T	-	-	-	-	-	-	41	0	0	67	15	22.3880597	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0	1	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216103082	4	19073357	A	T	-	-	-	-	-	-	40	0	0	68	18	26.47058824	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.043252595	1.043252595	1	0	0	1	0	0	0	0	3	3.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216104008	4	27841787	G	T	-	-	-	-	-	-	39	0	0	57	14	24.56140351	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.968008256	0.968008256	1	0	0.0025	0.9975	0	0	0	0	3	3.84E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216104160	4	29204870	A	T	-	-	-	-	-	-	38	0	0	51	11	21.56862745	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.85005767	0.85005767	1	0	0.0125	0.9875	0	0	0	0	3	1.94E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216104459	4	32287971	A	T	-	-	-	-	-	-	36	0	0	62	17	27.41935484	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.080645161	1.080645161	1	0	0	1	0	0	0	0	3	4.56E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216104464	4	32353635	G	T	-	-	-	-	-	-	32	0	0	54	15	27.77777778	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.094771242	1.094771242	1	0	0.00125	0.99875	0	0	0	0	3	2.20E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216104791	4	34938023	C	T	-	-	-	-	-	-	52	0	0	50	13	26	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.024705882	1.024705882	1	0	0.0025	0.9975	0	0	0	0	3	3.65E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216104927	4	36108790	C	T	ARAP2	CCDS3441.1	r.?	-	-	intronic	43	0	0	52	12	23.07692308	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.909502262	0.909502262	1	0	0.005	0.995	0	0	0	0	3	4.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216105040	4	37201553	C	T	-	-	-	-	-	-	37	0	0	69	18	26.08695652	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.028132992	1.028132992	1	0	0	1	0	0	0	0	3	5.16E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216105521	4	41307087	C	T	-	-	-	-	-	-	32	0	0	86	25	29.06976744	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.436388509	0.718194254	2	0	0.025	0.975	0	0	0	0	3	6.84E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216105601	4	41860869	A	T	-	-	-	-	-	-	32	0	0	89	15	16.85393258	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.832782551	0.832782551	1	0	0.00375	0.99625	0	0	0	0	3	8.23E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216105720	4	42783763	G	T	-	-	-	-	-	-	50	0	0	80	10	12.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.617647059	0.617647059	1	0.00125	0.0875	0.91125	0	0	0	0	3	1.17E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216105907	4	44197507	A	T	KCTD8	CCDS3467.1	r.?	-	-	intronic	37	0	0	87	19	21.83908046	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.079107505	1.079107505	1	0	0	1	0	0	0	0	3	9.64E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216106100	4	45573987	A	T	-	-	-	-	-	-	26	0	0	71	17	23.94366197	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.183098592	1.183098592	1	0	0.00125	0.99875	0	0	0	0	3	6.12E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216106107	4	45605716	C	T	-	-	-	-	-	-	27	1	3.703703704	78	24	30.76923077	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.520361991	0.760180995	2	0	0.00875	0.99125	0	0	0	0	3	3.63E-36	0.126579904	1	1	NA	NA	NA
1353824	PD9772b	1216106120	4	45721793	C	T	-	-	-	-	-	-	45	0	0	69	15	21.73913043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.074168798	1.074168798	1	0	0.00125	0.99875	0	0	0	0	3	1.34E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216106374	4	48052337	A	T	-	-	-	-	-	-	25	0	0	48	16	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	0.823529412	2	0	0.00375	0.99625	0	0	0	0	3	2.96E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216111158	4	56279091	A	T	TMEM165	CCDS3499.1	r.?	-	-	intronic	36	0	0	99	17	17.17171717	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.848484848	0.848484848	1	0	0.00375	0.99625	0	0	0	0	3	2.86E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216111223	4	56687551	A	T	-	-	-	-	-	-	30	0	0	78	13	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.00625	0.99375	0	0	0	0	3	1.99E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216111322	4	57309488	C	T	PAICS	CCDS47245.1	r.?	-	-	intronic	32	0	0	48	16	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	0.823529412	2	0	0.00625	0.99375	0	0	0	0	3	2.96E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216111517	4	58597466	G	T	-	-	-	-	-	-	37	0	0	85	24	28.23529412	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.395155709	0.697577855	2	0	0.03875	0.96125	0	0	0	0	3	3.98E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216111788	4	60804225	A	T	-	-	-	-	-	-	36	0	0	73	12	16.43835616	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.812248187	0.812248187	1	0	0.0025	0.9975	0	0	0	0	3	3.39E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216111953	4	62063313	G	T	LPHN3	ENST00000512091	r.?	-	-	upstream	43	0	0	76	20	26.31578947	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.300309598	1.300309598	1	0	0	1	0	0	0	0	3	7.96E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216112355	4	65235774	A	T	TECRL	CCDS33990.1	r.?	-	-	intronic	42	0	0	73	16	21.91780822	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.082997583	1.082997583	1	0	0	1	0	0	0	0	3	6.15E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216112371	4	65364604	A	T	-	-	-	-	-	-	42	0	0	79	18	22.78481013	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.125837677	1.125837677	1	0	0.00125	0.99875	0	0	0	0	3	7.86E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216112504	4	66297037	C	T	EPHA5	CCDS3513.1	r.?	-	-	intronic	57	0	0	84	19	22.61904762	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.117647059	1.117647059	1	0	0	1	0	0	0	0	3	4.62E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216113036	4	70212885	G	T	UGT2B28	ENST00000381079	r.?	-	-	intronic	26	0	0	79	13	16.4556962	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.813104989	0.813104989	1	0	0.005	0.995	0	0	0	0	3	2.37E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216113068	4	70374881	A	T	UGT2B4	ENST00000510114	r.?	-	-	intronic	27	0	0	32	5	15.625	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.772058824	0.772058824	1	0	0.02625	0.97375	0	0	0	0	3	5.62E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216113108	4	70618505	C	T	SULT1B1	CCDS3530.1	r.?	-	-	intronic	33	0	0	67	12	17.91044776	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.884986831	0.884986831	1	0	0.00375	0.99625	0	0	0	0	3	1.14E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216113218	4	71302878	G	T	MUC7	CCDS3541.1	r.?	-	-	intronic	30	0	0	35	16	45.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.258823529	1.129411765	2	0	0.00125	0.99875	0	0	0	0	3	5.66E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216113516	4	73760100	G	T	-	-	-	-	-	-	25	0	0	47	8	17.0212766	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.841051314	0.841051314	1	0	0.0175	0.9825	0	0	0	0	3	1.03E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216113615	4	74329466	G	T	-	-	-	-	-	-	36	0	0	64	16	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.00125	0.99875	0	0	0	0	3	5.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216113762	4	75527592	C	T	-	-	-	-	-	-	44	0	0	93	22	23.65591398	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.168880455	1.168880455	1	0	0	1	0	0	0	0	3	2.05E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216113942	4	76953109	G	T	CXCL11	CCDS3574.1	r.?	-	-	downstream	32	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0	1	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216114260	4	79174218	C	T	FRAS1	ENST00000264895	r.?	-	-	intronic	43	0	0	115	33	28.69565217	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.704859335	0.852429668	2	0	0	1	0	0	0	0	3	5.54E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1216114388	4	80072806	C	T	-	-	-	-	-	-	37	0	0	78	14	17.94871795	0	0	NA	2	2	100							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.0075	0.9925	0	0	0	0	3	4.63E-18	1	2.50E-05	1	NA	NA	NA
1353824	PD9772b	1216114734	4	82874016	G	T	-	-	-	-	-	-	36	0	0	89	16	17.97752809	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.888301388	0.888301388	1	0	0.005	0.995	0	0	0	0	3	1.91E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216115031	4	84969119	G	T	-	-	-	-	-	-	43	0	0	81	15	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.00125	0.99875	0	0	0	0	3	1.82E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216115057	4	85201834	C	T	-	-	-	-	-	-	55	0	0	88	17	19.31818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.954545455	0.954545455	1	0	0.00125	0.99875	0	0	0	0	3	3.34E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216115099	4	85669888	G	T	WDFY3	CCDS3609.1	r.?	-	-	intronic	30	0	0	77	12	15.58441558	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.770053476	0.770053476	1	0	0.01625	0.98375	0	0	0	0	3	6.64E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216115264	4	87135789	A	T	MAPK10	CCDS3612.1	r.?	-	-	intronic	37	0	0	70	15	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	1.70E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216115755	4	90589448	A	T	-	-	-	-	-	-	29	0	0	67	9	13.43283582	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.663740123	0.663740123	1	0	0.0575	0.9425	0	0	0	0	3	6.43E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216116080	4	94132047	A	T	GRID2	CCDS3637.1	r.?	-	-	intronic	43	0	0	87	17	19.54022989	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.965517241	0.965517241	1	0	0	1	0	0	0	0	3	2.71E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216116251	4	95547288	C	T	PDLIM5	CCDS3641.1	r.?	-	-	intronic	32	0	0	75	16	21.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.054117647	1.054117647	1	0	0.00375	0.99625	0	0	0	0	3	9.88E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216116320	4	96036479	C	T	BMPR1B	CCDS3642.1	r.?	-	-	intronic	37	0	0	76	15	19.73684211	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0.0025	0.9975	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216116344	4	96256420	C	T	UNC5C	CCDS3643.1	r.?	-	-	intronic	34	0	0	70	7	10	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.494117647	0.494117647	1	0.0175	0.2225	0.76	0	0	0	0	3	7.11E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216116390	4	96650628	A	T	-	-	-	-	-	-	27	0	0	70	22	31.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.552941176	0.776470588	2	0	0.005	0.995	0	0	0	0	3	1.63E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216116675	4	99147403	G	T	-	-	-	-	-	-	37	0	0	87	14	16.09195402	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.795131846	0.795131846	1	0	0.01125	0.98875	0	0	0	0	3	2.35E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216116929	4	101224997	G	T	-	-	-	-	-	-	48	0	0	93	16	17.20430108	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.850094877	0.850094877	1	0	0.00625	0.99375	0	0	0	0	3	4.04E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216117158	4	102967688	C	T	BANK1	CCDS34038.1	r.?	-	-	intronic	38	0	0	76	13	17.10526316	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.845201238	0.845201238	1	0	0.0075	0.9925	0	0	0	0	3	1.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216117198	4	103272867	G	T	-	-	-	-	-	-	49	0	0	73	18	24.65753425	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.21837228	1.21837228	1	0	0	1	0	0	0	0	3	1.62E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216117390	4	104339270	A	T	-	-	-	-	-	-	36	0	0	78	21	26.92307692	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.330316742	1.330316742	1	0	0	1	0	0	0	0	3	1.99E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216117391	4	104343456	A	T	-	-	-	-	-	-	38	0	0	62	11	17.74193548	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.876660342	0.876660342	1	0	0.0075	0.9925	0	0	0	0	3	1.96E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216117480	4	105027781	C	T	-	-	-	-	-	-	53	0	0	47	10	21.27659574	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.051314143	1.051314143	1	0	0.005	0.995	0	0	0	0	3	4.27E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216117553	4	105682975	C	T	-	-	-	-	-	-	36	0	0	29	10	34.48275862	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.703853955	0.851926978	2	0.00125	0.01125	0.9875	0	0	0	0	3	1.79E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216117975	4	109183967	C	T	-	-	-	-	-	-	30	0	0	71	12	16.90140845	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.835128418	0.835128418	1	0	0.01	0.99	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216118194	4	110561252	G	T	CCDC109B	CCDS3683.2	r.?	-	-	intronic	38	0	0	93	24	25.80645161	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.275142315	1.275142315	1	0	0	1	0	0	0	0	3	4.66E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216118352	4	111781857	C	T	MIR297	ENST00000401142	r.?	-	-	upstream	33	0	0	65	14	21.53846154	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.064253394	1.064253394	1	0	0.00125	0.99875	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216118399	4	112185928	C	T	-	-	-	-	-	-	36	0	0	54	6	11.11111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.549019608	0.549019608	1	0.0025	0.11	0.8875	0	0	0	0	3	3.29E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216118754	4	114839842	A	T	ARSJ	CCDS43264.1	r.?	-	-	intronic	36	0	0	77	12	15.58441558	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.770053476	0.770053476	1	0	0.0175	0.9825	0	0	0	0	3	6.64E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216118886	4	115858538	G	T	NDST4	CCDS3706.1	r.2022c>a	c.1343C>A	p.T448N	missense	54	0	0	74	15	20.27027027	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.001589825	1.001589825	1	0	0	1	0	0	0	0	3	4.22E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216119060	4	117152214	C	T	-	-	-	-	-	-	37	0	0	90	20	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	3.48E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216119374	4	119494875	A	T	-	-	-	-	-	-	36	0	0	60	12	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00375	0.99625	0	0	0	0	3	2.74E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216119617	4	121273762	A	T	-	-	-	-	-	-	30	0	0	85	13	15.29411765	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.755709343	0.755709343	1	0	0.01875	0.98125	0	0	0	0	3	6.45E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216119690	4	121933417	G	T	-	-	-	-	-	-	34	0	0	71	15	21.12676056	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.043910522	1.043910522	1	0	0.00125	0.99875	0	0	0	0	3	2.15E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216119738	4	122368006	C	T	-	-	-	-	-	-	40	0	0	64	5	7.8125	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.386029412	0.386029412	1	0.06	0.395	0.545	0	0	0	0	3	1.86E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216120147	4	125588993	A	T	ANKRD50	CCDS34060.1	r.?	-	-	intronic	31	0	0	78	14	17.94871795	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.886877828	0.886877828	1	0	0.0025	0.9975	0	0	0	0	3	4.63E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216120291	4	126838436	C	T	-	-	-	-	-	-	29	0	0	77	19	24.67532468	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.219251337	1.219251337	1	0	0	1	0	0	0	0	3	7.35E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216120320	4	127104762	G	T	-	-	-	-	-	-	30	0	0	80	14	17.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.864705882	0.864705882	1	0	0.00625	0.99375	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216120437	4	128137596	G	T	-	-	-	-	-	-	40	0	0	68	16	23.52941176	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0	1	0	0	0	0	3	1.75E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216120613	4	129714864	A	T	-	-	-	-	-	-	41	0	0	57	8	14.03508772	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.693498452	0.693498452	1	0.00125	0.02625	0.9725	0	0	0	0	3	5.19E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216120614	4	129715782	G	T	-	-	-	-	-	-	36	0	0	52	14	26.92307692	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.330316742	1.330316742	1	0	0.00125	0.99875	0	0	0	0	3	9.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216120615	4	129715783	G	T	-	-	-	-	-	-	36	0	0	52	14	26.92307692	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.330316742	1.330316742	1	0	0	1	0	0	0	0	3	9.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216120679	4	130223466	G	T	-	-	-	-	-	-	27	0	0	71	21	29.57746479	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.461474731	0.730737365	2	0	0.01125	0.98875	0	0	0	0	3	2.05E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216120827	4	131484874	G	T	-	-	-	-	-	-	42	0	0	28	6	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.00875	0.99125	0	0	0	0	3	5.36E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216121140	4	132708756	C	T	-	-	-	-	-	-	32	0	0	84	15	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.0025	0.9975	0	0	0	0	3	3.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216121242	4	133266687	C	T	-	-	-	-	-	-	26	0	0	24	5	20.83333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.029411765	1.029411765	1	0	0.01375	0.98625	0	0	0	0	3	1.23E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216121265	4	133370766	C	T	ENSG00000248369	ENST00000504357	r.?	-	-	upstream	41	0	0	74	14	18.91891892	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.93481717	0.93481717	1	0	0.0025	0.9975	0	0	0	0	3	2.10E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216121567	4	135955040	C	T	-	-	-	-	-	-	43	0	0	74	20	27.02702703	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.3354531	1.3354531	1	0	0	1	0	0	0	0	3	4.34E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216121602	4	136118553	C	T	-	-	-	-	-	-	36	0	0	82	13	15.85365854	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.783357245	0.783357245	1	0	0.015	0.985	0	0	0	0	3	3.95E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216121632	4	136337984	A	T	-	-	-	-	-	-	35	0	0	56	11	19.64285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.970588235	0.970588235	1	0	0.00375	0.99625	0	0	0	0	3	5.91E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216121692	4	136880328	A	T	-	-	-	-	-	-	42	0	0	90	13	14.44444444	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.71372549	0.71372549	1	0	0.03375	0.96625	0	0	0	0	3	1.40E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216121763	4	137639164	A	T	-	-	-	-	-	-	34	0	0	88	14	15.90909091	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.786096257	0.786096257	1	0	0.0125	0.9875	0	0	0	0	3	2.78E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216121803	4	137986278	A	T	-	-	-	-	-	-	39	0	0	65	14	21.53846154	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.064253394	1.064253394	1	0	0.00125	0.99875	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216121945	4	139215189	C	T	-	-	-	-	-	-	35	0	0	87	25	28.73563218	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.419878296	0.709939148	2	0	0.035	0.965	0	0	0	0	3	9.55E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216121973	4	139346417	G	T	-	-	-	-	-	-	39	0	0	82	15	18.29268293	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.903873745	0.903873745	1	0	0	1	0	0	0	0	3	2.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216121974	4	139346418	A	T	-	-	-	-	-	-	38	0	0	80	15	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.00125	0.99875	0	0	0	0	3	1.49E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216122202	4	140822548	C	T	MAML3	CCDS43266.1	r.?	-	-	intronic	33	0	0	93	22	23.65591398	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.168880455	1.168880455	1	0	0.00125	0.99875	0	0	0	0	3	2.05E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216122322	4	141769940	C	T	ENSG00000230981	ENST00000438406	r.?	-	-	downstream	37	0	0	78	15	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0.00125	0.99875	0	0	0	0	3	9.92E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216122455	4	142913093	C	T	-	-	-	-	-	-	32	0	0	75	14	18.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0.0025	0.9975	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216122557	4	143784611	A	T	-	-	-	-	-	-	37	0	0	81	21	25.92592593	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.281045752	1.281045752	1	0	0	1	0	0	0	0	3	4.88E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216122867	4	145563853	A	T	HHIP	CCDS3762.1	r.?	-	-	upstream	32	0	0	86	14	16.27906977	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.804377565	0.804377565	1	0	0.0075	0.9925	0	0	0	0	3	1.98E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216122990	4	146598536	C	T	C4orf51	CCDS47140.1	r.?	-	-	upstream	40	0	0	74	20	27.02702703	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.3354531	1.3354531	1	0	0	1	0	0	0	0	3	4.34E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216123165	4	147801176	C	T	TTC29	CCDS47141.1	r.?	-	-	intronic	36	0	0	84	12	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0	0.03	0.97	0	0	0	0	3	1.98E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216123409	4	149378914	G	T	-	-	-	-	-	-	29	0	0	67	9	13.43283582	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.663740123	0.663740123	1	0.00125	0.06125	0.9375	0	0	0	0	3	6.43E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216123480	4	150143707	A	T	-	-	-	-	-	-	40	0	0	68	11	16.17647059	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.799307958	0.799307958	1	0	0.01875	0.98125	0	0	0	0	3	5.76E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216123499	4	150329211	C	T	-	-	-	-	-	-	34	0	0	58	7	12.06896552	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.596348884	0.596348884	1	0.00375	0.07875	0.9175	0	0	0	0	3	1.88E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216124072	4	155203550	C	T	DCHS2	CCDS3785.1	r.?	-	-	intronic	39	0	0	87	16	18.3908046	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.90872211	0.90872211	1	0	0.00375	0.99625	0	0	0	0	3	1.29E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216124161	4	155914092	G	T	-	-	-	-	-	-	36	0	0	80	22	27.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.358823529	1.358823529	1	0	0	1	0	0	0	0	3	4.89E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216124413	4	157964624	A	T	-	-	-	-	-	-	30	0	0	82	16	19.51219512	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.964131994	0.964131994	1	0	0.00375	0.99625	0	0	0	0	3	4.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216125638	4	166418144	G	T	CPE	CCDS3810.1	r.?	-	-	intronic	37	0	0	41	9	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0.005	0.995	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216125671	4	166698563	A	T	-	-	-	-	-	-	31	0	0	62	11	17.74193548	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.699240987	0.699240987	1	0	0.0375	0.9625	0	0	0	0	3	1.96E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216125900	4	168610023	A	T	-	-	-	-	-	-	34	0	0	41	13	31.70731707	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.24964132	1.24964132	1	0	0	1	0	0	0	0	3	1.89E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216126184	4	170833518	A	T	-	-	-	-	-	-	35	0	0	71	10	14.08450704	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.695940348	0.695940348	1	0	0.035	0.965	0	0	0	0	3	3.42E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216126291	4	171685899	C	T	-	-	-	-	-	-	29	0	0	60	12	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00375	0.99625	0	0	0	0	3	2.74E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216126303	4	171744356	C	T	-	-	-	-	-	-	31	0	0	94	18	19.14893617	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.946182728	0.946182728	1	0	0.00125	0.99875	0	0	0	0	3	2.40E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216126304	4	171758308	A	T	-	-	-	-	-	-	32	0	0	73	10	13.69863014	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.676873489	0.676873489	1	0.00125	0.0575	0.94125	0	0	0	0	3	4.56E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216126391	4	172605324	G	T	-	-	-	-	-	-	34	0	0	66	12	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.0075	0.9925	0	0	0	0	3	9.36E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216126436	4	173008564	C	T	GALNTL6	CCDS34104.1	r.?	-	-	intronic	25	0	0	20	6	30	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.482352941	1.482352941	1	0.00125	0.0025	0.99625	0	0	0	0	3	5.70E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216126579	4	173975360	A	T	-	-	-	-	-	-	32	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0.0025	0.9975	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216126850	4	176044915	C	T	-	-	-	-	-	-	46	0	0	79	13	16.4556962	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.813104989	0.813104989	1	0	0.00625	0.99375	0	0	0	0	3	2.37E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216127043	4	177509637	G	T	-	-	-	-	-	-	48	0	0	86	17	19.76744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976744186	0.976744186	1	0	0.00125	0.99875	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216127044	4	177509638	G	T	-	-	-	-	-	-	48	0	0	87	17	19.54022989	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.965517241	0.965517241	1	0	0.00125	0.99875	0	0	0	0	3	2.71E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216127264	4	179085981	A	T	-	-	-	-	-	-	31	0	0	66	19	28.78787879	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.422459893	1.422459893	1	0	0	1	0	0	0	0	3	2.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216127266	4	179085989	A	T	-	-	-	-	-	-	32	0	0	66	20	30.3030303	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.497326203	0.748663102	2	0	0.01875	0.98125	0	0	0	0	3	3.11E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216127359	4	180024107	C	T	-	-	-	-	-	-	26	0	0	72	18	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.00125	0.99875	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216127473	4	180781004	A	T	-	-	-	-	-	-	40	0	0	84	17	20.23809524	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1	1	1	0	0	1	0	0	0	0	3	1.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216127675	4	181962095	A	T	-	-	-	-	-	-	32	0	0	74	5	6.756756757	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.333863275	0.333863275	1	0.16	0.58	0.26	0	0	0	0	2	3.78E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216127860	4	183222392	A	T	ODZ3	ENST00000511685	r.?	-	-	intronic	32	0	0	73	15	20.54794521	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.015310234	1.015310234	1	0	0	1	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216127925	4	183751680	G	T	-	-	-	-	-	-	22	0	0	81	14	17.28395062	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.854030501	0.854030501	1	0	0.0075	0.9925	0	0	0	0	3	8.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216127944	4	183927730	G	T	-	-	-	-	-	-	37	0	0	84	17	20.23809524	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1	1	1	0	0.00125	0.99875	0	0	0	0	3	1.42E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216128048	4	184624382	C	T	C4orf41	CCDS34112.1	r.?	-	-	intronic	27	0	0	70	20	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0	1	0	0	0	0	3	1.22E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216128132	4	185046228	G	T	ENPP6	CCDS3834.1	r.?	-	-	intronic	40	0	0	72	16	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	4.82E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216128216	4	185637493	C	T	MLF1IP	CCDS3838.1	r.?	-	-	intronic	25	0	0	82	15	18.29268293	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.903873745	0.903873745	1	0	0.00375	0.99625	0	0	0	0	3	2.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216128344	4	186499162	G	T	-	-	-	-	-	-	38	0	0	79	19	24.05063291	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.188384214	1.188384214	1	0	0.00125	0.99875	0	0	0	0	3	1.27E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216128728	4	188757548	C	T	-	-	-	-	-	-	37	0	0	73	13	17.80821918	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.879935536	0.879935536	1	0	0.00625	0.99375	0	0	0	0	3	7.97E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216128778	4	189069576	C	T	TRIML1	CCDS3851.1	r.?	-	-	downstream	25	0	0	13	5	38.46153846	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.900452489	1.900452489	1	0	0.00125	0.99875	0	0	0	0	3	3.89E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216128968	4	190013823	C	T	-	-	-	-	-	-	46	0	0	88	18	20.45454545	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.215240642	1.215240642	1	0	0	1	0	0	0	0	3	6.62E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216131163	4	190886841	A	T	FRG1	CCDS34121.1	r.?	-	-	downstream	28	0	0	72	11	15.27777778	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.754901961	0.754901961	1	0	0.015	0.985	0	0	0	0	3	1.12E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216132199	5	2236986	C	T	-	-	-	-	-	-	29	0	0	129	29	22.48062016	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.886000912	0.886000912	1	0	0.0025	0.9975	0	0	0	0	3	6.92E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216132320	5	2665587	G	T	-	-	-	-	-	-	38	0	0	88	40	45.45454545	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.79144385	0.895721925	2	0	0	1	0	0	0	0	3	1.32E-67	1	1	1	NA	NA	NA
1353824	PD9772b	1216133179	5	7296698	C	T	-	-	-	-	-	-	28	0	0	64	13	20.3125	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.003676471	1.003676471	1	0	0.005	0.995	0	0	0	0	3	1.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216133216	5	7666729	C	T	ADCY2	CCDS3872.2	r.?	-	-	intronic	27	0	0	20	8	40	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.976470588	0.988235294	2	0	0.00375	0.99625	0	0	0	0	3	4.66E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216133419	5	8936981	A	T	-	-	-	-	-	-	37	0	0	67	19	28.35820896	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.401229148	1.401229148	1	0	0.00125	0.99875	0	0	0	0	3	3.67E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216133424	5	8984566	G	T	-	-	-	-	-	-	38	0	0	88	16	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.0025	0.9975	0	0	0	0	3	1.57E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216133435	5	9056107	G	T	SEMA5A	CCDS3875.1	r.?	-	-	intronic	52	0	0	77	24	31.16883117	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.540106952	0.770053476	2	0	0.00875	0.99125	0	0	0	0	3	2.53E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216133916	5	13571569	C	T	-	-	-	-	-	-	35	0	0	72	12	16.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.656862745	0.656862745	1	0.00125	0.05	0.94875	0	0	0	0	3	2.84E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216133940	5	13887105	C	T	DNAH5	CCDS3882.1	r.?	-	-	intronic	46	0	0	64	23	35.9375	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.416360294	0.708180147	2	0	0.0325	0.9675	0	0	0	0	3	1.44E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216134082	5	15685833	G	T	FBXL7	ENST00000504595	r.?	-	-	intronic	40	0	0	58	19	32.75862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.291075051	1.291075051	1	0	0	1	0	0	0	0	3	1.50E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216134207	5	17124189	C	T	-	-	-	-	-	-	38	0	0	57	15	26.31578947	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.037151703	1.037151703	1	0	0	1	0	0	0	0	3	5.53E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216134370	5	18080307	C	T	-	-	-	-	-	-	39	0	0	80	15	18.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.926470588	0.926470588	1	0	0.00375	0.99625	0	0	0	0	3	1.49E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216134682	5	20085958	G	T	CDH18	CCDS3652.1	r.?	-	-	intronic	26	0	0	77	20	25.97402597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.28342246	1.28342246	1	0	0	1	0	0	0	0	3	1.07E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216135234	5	23003357	G	T	-	-	-	-	-	-	60	0	0	83	13	15.6626506	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.773919206	0.773919206	1	0	0.01375	0.98625	0	0	0	0	3	4.66E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216135244	5	23099303	A	T	-	-	-	-	-	-	44	0	0	73	15	20.54794521	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.015310234	1.015310234	1	0	0	1	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216135350	5	23881855	C	T	-	-	-	-	-	-	38	0	0	32	7	21.875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.080882353	1.080882353	1	0	0.00375	0.99625	0	0	0	0	3	2.36E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216135389	5	24163372	C	T	-	-	-	-	-	-	37	0	0	69	17	24.63768116	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.217391304	1.217391304	1	0	0	1	0	0	0	0	3	3.56E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216135399	5	24224564	G	T	-	-	-	-	-	-	34	0	0	82	18	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0.0025	0.9975	0	0	0	0	3	1.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216135422	5	24323853	A	T	-	-	-	-	-	-	41	0	0	73	14	19.17808219	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.947622885	0.947622885	1	0	0.00375	0.99625	0	0	0	0	3	1.71E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216135536	5	25223821	G	T	-	-	-	-	-	-	35	0	0	79	15	18.98734177	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.938198064	0.938198064	1	0	0.00125	0.99875	0	0	0	0	3	1.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216135537	5	25226315	C	T	-	-	-	-	-	-	37	0	0	80	11	13.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.679411765	0.679411765	1	0	0.04125	0.95875	0	0	0	0	3	3.73E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216135597	5	25659458	A	T	-	-	-	-	-	-	29	0	0	72	13	18.05555556	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.892156863	0.892156863	1	0	0.00625	0.99375	0	0	0	0	3	6.58E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216135632	5	25874838	A	T	-	-	-	-	-	-	39	0	0	81	21	25.92592593	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.281045752	1.281045752	1	0	0	1	0	0	0	0	3	4.88E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216135778	5	27174488	G	T	-	-	-	-	-	-	22	0	0	46	8	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0.00125	0.00875	0.99	0	0	0	0	3	8.61E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216135784	5	27238894	G	T	-	-	-	-	-	-	28	0	0	79	14	17.72151899	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.875651526	0.875651526	1	0	0.00375	0.99625	0	0	0	0	3	5.60E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216135787	5	27294893	G	T	-	-	-	-	-	-	38	0	0	102	23	22.54901961	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.114186851	1.114186851	1	0	0	1	0	0	0	0	3	3.39E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216135945	5	28655254	G	T	-	-	-	-	-	-	47	0	0	64	14	21.875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.080882353	1.080882353	1	0	0	1	0	0	0	0	3	2.31E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216136338	5	30892415	C	T	-	-	-	-	-	-	40	0	0	87	14	16.09195402	269	0	0	148	28	18.91891892							4	2	2	1	NA	NA	NA	unphased	0.795131846	0.795131846	1	0	0.0125	0.9875	0	0	0	0	3	2.35E-17	1	2.61E-35	1	YES	somatic	1_1
1353824	PD9772b	1216136392	5	31311575	G	T	CDH6	CCDS3894.1	r.?	-	-	intronic	35	0	0	80	14	17.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.864705882	0.864705882	1	0	0.00375	0.99625	0	0	0	0	3	6.76E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216136526	5	32145789	A	T	GOLPH3	CCDS3896.1	r.?	-	-	intronic	38	0	0	67	14	20.89552239	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.032484636	1.032484636	1	0	0.00125	0.99875	0	0	0	0	3	4.66E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216136567	5	32448600	C	T	ZFR	CCDS34139.1	r.?	-	-	upstream	33	0	0	78	24	30.76923077	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.520361991	0.760180995	2	0	0.01375	0.98625	0	0	0	0	3	3.63E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216136646	5	33157594	A	T	-	-	-	-	-	-	36	0	0	69	18	26.08695652	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.289002558	1.289002558	1	0	0	1	0	0	0	0	3	5.16E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216136799	5	34117038	C	T	-	-	-	-	-	-	30	0	0	65	7	10.76923077	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.532126697	0.532126697	1	0.00125	0.1325	0.86625	0	0	0	0	3	4.22E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216137051	5	35712569	A	T	SPEF2	CCDS43309.1	r.?	-	-	intronic	35	0	0	64	16	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	5.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216137246	5	37148901	C	T	C5orf42	CCDS34146.1	r.?	-	-	intronic	30	0	0	66	15	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0.00125	0.99875	0	0	0	0	3	6.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216137589	5	39462633	C	T	DAB2	ENST00000511792	r.?	-	-	upstream	33	0	0	84	13	15.47619048	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.764705882	0.764705882	1	0	0.01625	0.98375	0	0	0	0	3	5.49E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216137643	5	39843484	G	T	-	-	-	-	-	-	42	0	0	95	17	17.89473684	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.884210526	0.884210526	1	0	0	1	0	0	0	0	3	1.35E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216138036	5	43339870	A	T	-	-	-	-	-	-	33	0	0	57	16	28.07017544	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.10629515	1.10629515	1	0	0	1	0	0	0	0	3	7.28E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216139365	5	49670672	G	T	-	-	-	-	-	-	46	0	0	58	18	31.03448276	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.223123732	1.223123732	1	0	0	1	0	0	0	0	3	1.42E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216139408	5	50142309	C	T	PARP8	CCDS3954.1	r.7130c>u	c.?	p.?	3'UTR variant	44	0	0	62	13	20.96774194	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.826375712	0.826375712	1	0.00125	0.01	0.98875	0	0	0	0	3	8.08E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216139585	5	51821322	C	T	-	-	-	-	-	-	41	0	0	61	15	24.59016393	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.969141755	0.969141755	1	0	0.00125	0.99875	0	0	0	0	3	1.73E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216140101	5	56753152	C	T	-	-	-	-	-	-	29	0	0	55	15	27.27272727	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.07486631	1.07486631	1	0	0	1	0	0	0	0	3	3.01E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216140109	5	56951487	C	T	-	-	-	-	-	-	23	0	0	75	20	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0	1	0	0	0	0	3	5.89E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216141153	5	67550965	A	T	PIK3R1	CCDS3993.1	r.?	-	-	intronic	29	0	0	51	12	23.52941176	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.92733564	0.92733564	1	0	0.00125	0.99875	0	0	0	0	3	3.24E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216141655	5	73484693	A	T	-	-	-	-	-	-	32	0	0	70	20	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0	1	0	0	0	0	3	1.22E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216141704	5	74066843	C	T	GFM2	CCDS4023.1	r.?	-	-	upstream	33	0	0	42	12	28.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.12605042	1.12605042	1	0	0.0025	0.9975	0	0	0	0	3	2.35E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216141867	5	75573585	A	T	SV2C	ENST00000502798	r.?	-	-	intronic	39	0	0	30	10	33.33333333	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.31372549	1.31372549	1	0	0	1	0	0	0	0	3	2.68E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216143071	5	86718076	G	T	-	-	-	-	-	-	53	1	1.886792453	66	24	36.36363636	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.43315508	0.71657754	2	0	0.035	0.965	0	0	0	0	3	3.04E-38	0.233303855	1	1	NA	NA	NA
1353824	PD9772b	1216143648	5	92766848	A	T	-	-	-	-	-	-	48	0	0	68	19	27.94117647	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.101211073	1.101211073	1	0	0	1	0	0	0	0	3	5.06E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216143905	5	95776050	C	T	-	-	-	-	-	-	28	0	0	55	13	23.63636364	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.931550802	0.931550802	1	0	0.005	0.995	0	0	0	0	3	1.46E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216144331	5	99612390	C	T	-	-	-	-	-	-	31	0	0	64	20	31.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.231617647	1.231617647	1	0	0	1	0	0	0	0	3	1.52E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216144677	5	103138304	A	T	-	-	-	-	-	-	35	0	0	56	15	26.78571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.055672269	1.055672269	1	0	0.00125	0.99875	0	0	0	0	3	4.09E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216144869	5	104753096	C	T	-	-	-	-	-	-	42	0	0	65	15	23.07692308	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.909502262	0.909502262	1	0	0.00625	0.99375	0	0	0	0	3	5.00E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216145094	5	106967888	A	T	EFNA5	CCDS4097.1	r.?	-	-	intronic	30	0	0	50	17	34	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.34	1.34	1	0	0	1	0	0	0	0	3	6.43E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216145145	5	107421971	C	T	FBXL17	ENST00000359660	r.?	-	-	intronic	39	0	0	68	25	36.76470588	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.448961938	0.724480969	2	0	0.02375	0.97625	0	0	0	0	3	6.41E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216146028	5	116556523	C	T	-	-	-	-	-	-	44	0	0	57	16	28.07017544	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.10629515	1.10629515	1	0	0	1	0	0	0	0	3	7.28E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216146397	5	120886445	A	T	-	-	-	-	-	-	43	0	0	58	16	27.5862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.087221095	1.087221095	1	0	0	1	0	0	0	0	3	1.00E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216146644	5	123578735	C	T	-	-	-	-	-	-	36	0	0	62	17	27.41935484	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.080645161	1.080645161	1	0	0	1	0	0	0	0	3	4.56E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216147129	5	128282371	G	T	SLC27A6	ENST00000508645	r.?	-	-	intronic	31	0	0	49	11	22.44897959	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.884753902	0.884753902	1	0	0.00875	0.99125	0	0	0	0	3	1.19E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216147148	5	128421959	G	T	-	-	-	-	-	-	29	0	0	51	15	29.41176471	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.15916955	1.15916955	1	0	0.0025	0.9975	0	0	0	0	3	8.22E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216147460	5	131758811	C	T	C5orf56	CCDS34232.1	r.?	-	-	intronic	27	0	0	38	12	31.57894737	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.244582043	1.244582043	1	0	0	1	0	0	0	0	3	5.86E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216147654	5	134493507	A	T	-	-	-	-	-	-	28	0	0	62	14	22.58064516	282	1	0.354609929	202	38	18.81188119							3	2	1	1	NA	NA	NA	unphased	0.889943074	0.889943074	1	0	0.00125	0.99875	0	0	0	0	3	1.42E-19	1	3.04E-47	0.756718676	YES	somatic	1_1
1353824	PD9772b	1216147728	5	135537821	C	T	-	-	-	-	-	-	35	0	0	46	8	17.39130435	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.685421995	0.685421995	1	0.00125	0.0425	0.95625	0	0	0	0	3	8.61E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216148029	5	139293146	C	T	NRG2	CCDS47277.1	r.?	-	-	intronic	24	0	0	49	11	22.44897959	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.884753902	0.884753902	1	0	0.01125	0.98875	0	0	0	0	3	1.19E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216148130	5	140300797	C	T	PCDHA11	CCDS47284.1	r.?	-	-	intronic	27	0	0	64	18	28.125	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.108455882	1.108455882	1	0	0	1	0	0	0	0	3	1.10E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216148209	5	141322248	C	T	PCDH12	CCDS4269.1	r.?	-	-	downstream	30	0	0	42	10	23.80952381	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.93837535	0.93837535	1	0.00125	0.00375	0.995	0	0	0	0	3	1.24E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216148653	5	146290965	C	T	PPP2R2B	CCDS4284.1	r.?	-	-	intronic	26	0	0	49	15	30.6122449	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.206482593	1.206482593	1	0	0	1	0	0	0	0	3	4.10E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216149127	5	151500680	A	T	-	-	-	-	-	-	31	0	0	62	20	32.25806452	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.271347249	1.271347249	1	0	0	1	0	0	0	0	3	7.19E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216149257	5	152799149	G	T	-	-	-	-	-	-	32	0	0	58	16	27.5862069	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.087221095	1.087221095	1	0	0	1	0	0	0	0	3	1.00E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216149328	5	153692469	A	T	GALNT10	CCDS4325.1	r.?	-	-	intronic	38	0	0	54	13	24.07407407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.948801743	0.948801743	1	0	0.00375	0.99625	0	0	0	0	3	1.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216149588	5	156730087	C	T	CYFIP2	ENST00000347377	r.?	-	-	intronic	27	0	0	31	10	32.25806452	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.271347249	1.271347249	1	0	0.00125	0.99875	0	0	0	0	3	3.94E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216149827	5	158997761	C	T	-	-	-	-	-	-	46	0	0	70	27	38.57142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.520168067	0.760084034	2	0	0.005	0.995	0	0	0	0	3	1.10E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1216150014	5	160924051	C	T	GABRB2	CCDS4355.1	r.?	-	-	intronic	35	0	0	61	16	26.2295082	0	0	NA	2	0	0							3	2	1	1	NA	NA	NA	unphased	1.033751205	1.033751205	1	0	0	1	0	0	0	0	3	2.50E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216150039	5	161203677	A	T	-	-	-	-	-	-	28	0	0	68	18	26.47058824	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.043252595	1.043252595	1	0	0	1	0	0	0	0	3	3.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216150422	5	164725005	C	T	-	-	-	-	-	-	32	0	0	52	16	30.76923077	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.212669683	1.212669683	1	0	0	1	0	0	0	0	3	1.33E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216150449	5	165107908	A	T	-	-	-	-	-	-	32	0	0	70	18	25.71428571	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.013445378	1.013445378	1	0	0.0025	0.9975	0	0	0	0	3	6.91E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216150721	5	168020080	G	T	-	-	-	-	-	-	29	0	0	47	14	29.78723404	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.173967459	1.173967459	1	0	0.00125	0.99875	0	0	0	0	3	1.79E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216150727	5	168039756	C	T	ENSG00000233913	ENST00000421908	r.?	-	-	upstream	34	0	0	59	18	30.50847458	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.202392822	1.202392822	1	0	0	1	0	0	0	0	3	2.03E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216151000	5	170918357	C	T	-	-	-	-	-	-	39	0	0	45	11	24.44444444	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.963398693	0.963398693	1	0	0.0025	0.9975	0	0	0	0	3	4.24E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216151342	5	174408805	G	T	-	-	-	-	-	-	23	0	0	75	16	21.33333333	0	0	NA	1	0	0							3	2	1	1	NA	NA	NA	unphased	0.840784314	0.840784314	1	0	0.00875	0.99125	0	0	0	0	3	9.88E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216151516	5	175901678	C	T	FAF2	CCDS34296.1	r.?	-	-	intronic	34	0	0	47	10	21.27659574	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.838548185	0.838548185	1	0	0.01	0.99	0	0	0	0	3	4.27E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216151533	5	176100998	A	T	-	-	-	-	-	-	29	0	0	3	2	66.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	2.62745098	2.62745098	1	0.00375	0.01125	0.98375	0	0.00125	0	0	3	7.48E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216151999	6	325089	C	T	DUSP22	CCDS4468.1	r.?	-	-	intronic	70	0	0	17	4	23.52941176	6	0	0	2	0	0							4	3	1	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0.01	0.99	0	0	0	0	3	1.41E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216153290	6	8913355	C	T	-	-	-	-	-	-	37	0	0	84	33	39.28571429	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.941176471	0.970588235	2	0	0	1	0	0	0	0	3	2.24E-53	1	1	1	NA	NA	NA
1353824	PD9772b	1216153312	6	9026368	C	T	-	-	-	-	-	-	29	0	0	69	37	53.62318841	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.649616368	0.883205456	3	0	0	1	0	0	0	0	3	2.94E-66	1	1	1	NA	NA	NA
1353824	PD9772b	1216153966	6	13358013	C	T	GFOD1	CCDS4524.1	r.?	-	-	downstream	37	0	0	45	16	35.55555556	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.756862745	0.878431373	2	0	0.00375	0.99625	0	0	0	0	3	8.61E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216154465	6	18184591	C	T	KDM1B	CCDS34343.1	r.?	-	-	intronic	25	0	0	39	11	28.20512821	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.111613876	1.111613876	1	0	0.005	0.995	0	0	0	0	3	7.20E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216154550	6	18943998	A	T	-	-	-	-	-	-	46	0	0	55	13	23.63636364	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.931550802	0.931550802	1	0	0.0075	0.9925	0	0	0	0	3	1.46E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216155051	6	23890711	C	T	-	-	-	-	-	-	40	0	0	51	5	9.803921569	254	0	0	268	13	4.850746269							3	2	1	1	NA	NA	NA	unphased	0.38638985	0.38638985	1	0.07375	0.4225	0.50375	0	0	0	0	3	6.06E-06	1	1.64E-09	1	YES	somatic	1_1
1353824	PD9772b	1216155537	6	27922332	G	T	OR4D1	CCDS4642.1	r.?	-	-	upstream	49	0	0	66	20	30.3030303	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.1942959	1.1942959	1	0	0	1	0	0	0	0	3	3.11E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216155850	6	30126528	C	T	TRIM10	CCDS34375.1	r.?	-	-	intronic	39	0	0	71	13	18.30985915	0	0	NA	0	0	NA							2.070786367	1	1	0.929213633	2	1	0.070786367	unphased	0.551486153	0.551486153	1	0.01	0.34875	0.64125	0	0	0	0	3	5.42E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216156183	6	32344979	G	T	-	-	-	-	-	-	38	0	0	76	13	17.10526316	0	0	NA	0	0	NA							2.166606176	1	1	0.833393824	2	1	0.166606176	unphased	0.5315944	0.5315944	1	0.01125	0.44375	0.545	0	0	0	0	3	1.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216156517	6	33630974	C	T	ITPR3	CCDS4783.1	r.?	-	-	intronic	39	0	0	19	9	47.36842105	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.340557276	1.170278638	2	0	0	1	0	0	0	0	3	1.72E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216156557	6	34286899	C	T	NUDT3	CCDS4791.1	r.?	-	-	intronic	31	0	0	66	8	12.12121212	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.598930481	0.598930481	1	0.005	0.08125	0.91375	0	0	0	0	3	1.73E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216156692	6	35383255	A	T	PPARD	CCDS4803.1	r.?	-	-	intronic	44	0	0	45	8	17.77777778	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.878431373	0.878431373	1	0	0.01375	0.98625	0	0	0	0	3	7.14E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216156721	6	35608455	C	T	FKBP5	CCDS4808.1	r.?	-	-	intronic	35	0	0	66	17	25.75757576	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.272727273	1.272727273	1	0	0	1	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216156919	6	37119802	C	T	-	-	-	-	-	-	33	0	0	15	6	40	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.976470588	1.976470588	1	0	0.0025	0.9975	0	0	0	0	3	7.52E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216156941	6	37348692	C	T	RNF8	CCDS4834.1	r.?	-	-	intronic	24	0	0	44	12	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	4.44E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216156984	6	37715283	G	T	-	-	-	-	-	-	29	0	0	42	11	26.19047619	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.294117647	1.294117647	1	0	0.00125	0.99875	0	0	0	0	3	1.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216157138	6	38947688	G	T	DNAH8	CCDS4838.1	r.?	-	-	intronic	46	0	0	94	25	26.59574468	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.314142678	1.314142678	1	0	0	1	0	0	0	0	3	8.76E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216157209	6	39560001	A	T	KIF6	CCDS4844.1	r.?	-	-	intronic	37	0	0	43	8	18.60465116	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.919288646	0.919288646	1	0	0.01125	0.98875	0	0	0	0	3	4.85E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216157219	6	39629417	A	T	KIF6	CCDS4844.1	r.?	-	-	intronic	43	0	0	99	15	15.15151515	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.748663102	0.748663102	1	0	0.01875	0.98125	0	0	0	0	3	4.43E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216157312	6	40368909	C	T	LRFN2	CCDS34443.1	r.?	-	-	intronic	39	0	0	41	9	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0.00625	0.99375	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216158080	6	46409284	G	T	RCAN2	ENST00000371374	r.?	-	-	intronic	38	0	0	68	18	26.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.307958478	1.307958478	1	0	0	1	0	0	0	0	3	3.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216158325	6	48369796	C	T	-	-	-	-	-	-	26	0	0	109	26	23.85321101	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.17862925	1.17862925	1	0	0.00125	0.99875	0	0	0	0	3	9.06E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216158963	6	53815629	C	T	C6orf142	ENST00000505762	r.?	-	-	intronic	54	0	0	83	16	19.27710843	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.952515946	0.952515946	1	0	0.0025	0.9975	0	0	0	0	3	5.75E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216160449	6	62096134	G	T	-	-	-	-	-	-	32	0	0	64	11	17.1875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.849264706	0.849264706	1	0	0.01125	0.98875	0	0	0	0	3	2.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216160495	6	62388376	A	T	KHDRBS2	CCDS4963.1	r.?	-	-	downstream	42	0	0	81	18	22.22222222	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0	1	0	0	0	0	3	1.29E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216160561	6	63039779	C	T	-	-	-	-	-	-	29	0	0	78	18	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	6.10E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216160884	6	65529533	G	T	EYS	CCDS47445.1	r.?	-	-	intronic	40	0	0	91	13	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0	0.0325	0.9675	0	0	0	0	3	1.63E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216160885	6	65540141	C	T	EYS	CCDS47445.1	r.?	-	-	intronic	31	0	0	95	19	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	5.98E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216160905	6	65718736	G	T	EYS	CCDS47445.1	r.?	-	-	intronic	25	0	0	41	9	21.95121951	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.084648494	1.084648494	1	0	0.005	0.995	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216160964	6	66081327	A	T	EYS	CCDS47445.1	r.?	-	-	intronic	24	0	0	84	15	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.00625	0.99375	0	0	0	0	3	3.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216161397	6	68977682	C	T	-	-	-	-	-	-	30	0	0	74	15	20.27027027	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.001589825	1.001589825	1	0	0	1	0	0	0	0	3	4.22E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216161456	6	69498571	G	T	BAI3	CCDS4968.1	r.?	-	-	intronic	39	0	0	81	24	29.62962963	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.464052288	0.732026144	2	0	0.0225	0.9775	0	0	0	0	3	1.04E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216161598	6	70368360	C	T	-	-	-	-	-	-	39	0	0	70	18	25.71428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.270588235	1.270588235	1	0	0	1	0	0	0	0	3	6.91E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216161615	6	70515891	A	T	-	-	-	-	-	-	39	0	0	26	5	19.23076923	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.950226244	0.950226244	1	0	0.02125	0.97875	0	0	0	0	3	1.88E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216162134	6	74620482	C	T	-	-	-	-	-	-	26	0	0	41	8	19.51219512	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.964131994	0.964131994	1	0	0.00375	0.99625	0	0	0	0	3	3.22E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216162264	6	75377203	C	T	-	-	-	-	-	-	21	0	0	59	11	18.6440678	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.921236291	0.921236291	1	0	0.00125	0.99875	0	0	0	0	3	1.10E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216162534	6	77657219	C	T	-	-	-	-	-	-	34	0	0	77	15	19.48051948	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.76776165	0.76776165	1	0	0.015	0.985	0	0	0	0	3	8.05E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216163274	6	84798113	C	T	MRAP2	CCDS5001.1	r.?	-	-	intronic	32	0	0	71	16	22.53521127	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.888152444	0.888152444	1	0	0.00375	0.99625	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216163392	6	86036664	C	T	-	-	-	-	-	-	38	0	0	36	11	30.55555556	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.204248366	1.204248366	1	0	0	1	0	0	0	0	3	2.62E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216163637	6	88470837	G	T	-	-	-	-	-	-	27	0	0	34	9	26.47058824	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.043252595	1.043252595	1	0	0.0025	0.9975	0	0	0	0	3	9.15E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216164425	6	96949706	G	T	-	-	-	-	-	-	42	0	0	64	17	26.5625	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.046875	1.046875	1	0	0	1	0	0	0	0	3	8.43E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216164746	6	100085663	C	T	-	-	-	-	-	-	27	0	0	44	13	29.54545455	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.164438503	1.164438503	1	0	0	1	0	0	0	0	3	5.49E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216165102	6	103467327	G	T	-	-	-	-	-	-	34	0	0	72	18	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	1.22E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216165113	6	103518669	G	T	-	-	-	-	-	-	35	0	0	72	19	26.38888889	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.04003268	1.04003268	1	0	0	1	0	0	0	0	3	1.75E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216165580	6	108091607	A	T	SCML4	CCDS5060.2	r.?	-	-	intronic	42	0	0	60	13	21.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.853921569	0.853921569	1	0	0.0025	0.9975	0	0	0	0	3	5.07E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216165866	6	111122396	C	T	CDK19	CCDS5085.1	r.?	-	-	intronic	28	0	0	56	9	16.07142857	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.633403361	0.633403361	1	0.00125	0.06625	0.9325	0	0	0	0	3	1.20E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216166788	6	118746614	C	T	-	-	-	-	-	-	41	0	0	82	26	31.70731707	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.60025395	0.844808159	1.894221704	0	0.00125	0.99875	0	0	0	0	3	1.89E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216166958	6	120139807	G	T	-	-	-	-	-	-	24	0	0	67	26	38.80597015	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.95851976	0.97925988	2	0	0	1	0	0	0	0	3	3.31E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1216167358	6	123307802	C	T	-	-	-	-	-	-	29	0	0	22	11	50	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	2.523477383	0.871901893	2.894221704	0	0.005	0.995	0	0	0	0	3	3.27E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216167496	6	124408964	G	T	NKAIN2	CCDS34526.1	r.?	-	-	intronic	46	0	0	72	36	50	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	2.523477383	0.871901893	2.894221704	0	0	1	0	0	0	0	3	5.40E-63	1	1	1	NA	NA	NA
1353824	PD9772b	1216167549	6	124863839	G	T	NKAIN2	CCDS34526.1	r.?	-	-	intronic	37	0	0	80	30	37.5	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.892608037	0.999148111	1.894221704	0	0	1	0	0	0	0	3	6.48E-48	1	1	1	NA	NA	NA
1353824	PD9772b	1216167603	6	125139135	G	T	NKAIN2	CCDS34526.1	r.?	-	-	intronic	42	0	0	72	20	27.77777778	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.40193188	1.40193188	1	0	0	0.99875	0.00125	0	0	0	3	2.32E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216168470	6	132295776	A	T	-	-	-	-	-	-	32	0	0	43	14	32.55813953	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.643194575	0.86747743	1.894221704	0	0.01125	0.98875	0	0	0	0	3	4.18E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216169076	6	137297408	A	T	-	-	-	-	-	-	32	0	0	77	34	44.15584416	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	2.228525481	1.114262741	2	0	0	1	0	0	0	0	3	3.84E-57	1	1	1	NA	NA	NA
1353824	PD9772b	1216169246	6	138405043	C	T	-	-	-	-	-	-	32	0	0	70	32	45.71428571	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	2.307179322	1.153589661	2	0	0	1	0	0	0	0	3	1.68E-54	1	1	1	NA	NA	NA
1353824	PD9772b	1216169444	6	139900772	C	T	-	-	-	-	-	-	27	0	0	51	18	35.29411765	0	0	NA	0	0	NA							4.105778296	3	1	0.894221704	3	2	0.105778296	unphased	1.781278153	0.940374693	1.894221704	0	0	1	0	0	0	0	3	9.10E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216169862	6	143563663	C	T	AIG1	CCDS5198.1	r.?	-	-	intronic	32	0	0	77	37	48.05194805	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	2.418916886	0.832039414	2.907214303	0	0	1	0	0	0	0	3	7.74E-64	1	1	1	NA	NA	NA
1353824	PD9772b	1216170021	6	144833644	G	T	UTRN	CCDS34547.1	r.?	-	-	intronic	44	0	0	66	11	16.66666667	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	0.838993695	0.838993695	1	0	0.005	0.995	0	0	0	0	3	4.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216170314	6	147036383	A	T	C6orf103	CCDS47498.1	r.?	-	-	intronic	29	0	0	81	33	40.74074074	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	2.050873476	1.025436738	2	0	0	1	0	0	0	0	3	4.96E-54	1	1	1	NA	NA	NA
1353824	PD9772b	1216171031	6	152752890	G	T	SYNE1	CCDS5236.1	r.?	-	-	intronic	36	0	0	79	9	11.39240506	0	0	NA	0	0	NA							4.092785697	3	1	0.907214303	3	2	0.092785697	unphased	0.573489361	0.573489361	1	0.00625	0.12625	0.8675	0	0	0	0	3	2.93E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216171089	6	153186656	C	T	-	-	-	-	-	-	24	0	0	97	25	25.77319588	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.472306947	0.831166397	1.771374485	0	0.00125	0.99875	0	0	0	0	3	2.13E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216171287	6	154355605	C	T	OPRM1	CCDS47503.1	r.?	-	-	intronic	33	0	0	12	5	41.66666667	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	2.380229565	0.858862481	2.771374485	0.0025	0.015	0.9825	0	0	0	0	3	2.40E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216171440	6	155181363	C	T	-	-	-	-	-	-	32	0	0	42	11	26.19047619	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.496144298	1.496144298	1	0	0.0025	0.9975	0	0	0	0	3	1.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216171518	6	155520725	A	T	TIAM2	CCDS34558.1	r.?	-	-	intronic	40	0	0	77	9	11.68831169	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.667700761	0.865598713	0.771374485	0	0.01125	0.98875	0	0	0	0	3	2.32E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216171750	6	156973171	A	T	-	-	-	-	-	-	27	0	0	51	7	13.7254902	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.784075621	1.016465591	0.771374485	0	0.00875	0.99125	0	0	0	0	3	7.46E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216171994	6	158445059	C	T	SYNJ2	CCDS5254.1	r.?	-	-	intronic	31	0	0	55	13	23.63636364	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.350239317	1.350239317	1	0	0	1	0	0	0	0	3	1.46E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216172088	6	159057265	C	T	TMEM181	CCDS43520.1	r.?	-	-	downstream	31	0	0	38	7	18.42105263	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.052312018	1.052312018	1	0	0.00375	0.99625	0	0	0	0	3	8.61E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216172135	6	159330163	C	T	C6orf99	ENST00000367073	r.?	-	-	intronic	16	0	0	20	7	35	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.999392834	0.999696417	2	0	0.005	0.995	0	0	0	0	3	5.72E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216172156	6	159462519	C	T	TAGAP	CCDS5261.1	r.676g>a	c.344G>A	p.G115D	missense	34	0	0	71	15	21.12676056	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.206876962	1.206876962	1	0	0	1	0	0	0	0	3	2.15E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216172504	6	161631915	C	T	AGPAT4	CCDS5280.1	r.?	-	-	intronic	33	0	0	90	17	18.88888889	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	1.079037403	1.079037403	1	0	0	1	0	0	0	0	3	5.05E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216172798	6	163444029	C	T	PACRG	CCDS43524.1	r.?	-	-	intronic	43	0	0	103	12	11.65048544	0	0	NA	0	0	NA							4.771374485	2	2	0.228625515	3	2	0.771374485	unphased	0.665539917	0.862797423	0.771374485	0	0.00875	0.99125	0	0	0	0	3	2.45E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216173120	6	166092221	C	T	-	-	-	-	-	-	40	0	0	51	10	19.60784314	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.593783958	0.593783958	1	0.00625	0.13875	0.855	0	0	0	0	3	1.04E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216173465	6	168892615	C	T	SMOC2	CCDS5307.1	r.?	-	-	intronic	24	0	0	72	17	23.61111111	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.71501485	0.71501485	1	0	0.02625	0.97375	0	0	0	0	3	7.97E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216173603	6	170068038	A	T	WDR27	CCDS47520.1	r.?	-	-	intronic	44	0	0	3	2	66.66666667	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	2.018865458	2.018865458	1	0	0.01375	0.98625	0	0	0	0	3	7.48E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216173631	6	170419496	A	T	-	-	-	-	-	-	30	0	0	45	4	8.888888889	0	0	NA	0	0	NA							2.087121716	1	1	0.912878284	2	1	0.087121716	unphased	0.269182061	0.269182061	1	0.275	0.63125	0.09375	0	0	0	0	2	7.91E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216173943	7	1730842	C	T	ENSG00000205971	ENST00000382528	r.?	-	-	downstream	37	0	0	27	4	14.81481481	0	0	NA	0	0	NA							0.116617047	0	0	0.883382953	1	0	0.116617047	unphased	0.156710151	1.343801401	0.116617047	0.00125	0.01	0.98875	0	0	0	0	3	1.00E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216173973	7	2366049	C	T	SNX8	ENST00000435336	r.?	-	-	intronic	48	0	0	18	4	22.22222222	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.653594771	0.653594771	1	0	0.0425	0.9575	0	0	0	0	3	1.81E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216174305	7	5606613	C	T	ACTB	ENST00000443528	r.?	-	-	upstream	28	0	0	23	7	30.43478261	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.895140665	0.895140665	1	0	0.01	0.99	0	0	0	0	3	1.79E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216174490	7	6920265	A	T	-	-	-	-	-	-	41	0	0	50	9	18	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.529411765	0.529411765	1	0.0125	0.26625	0.72125	0	0	0	0	3	4.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216174585	7	7511852	A	T	COL28A1	CCDS43553.1	r.?	-	-	intronic	35	0	0	71	13	18.30985915	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.538525269	0.538525269	1	0.0125	0.43125	0.55625	0	0	0	0	3	5.42E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216174663	7	8231392	A	T	ICA1	CCDS34602.1	r.?	-	-	intronic	49	0	0	67	12	17.91044776	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.526777875	0.526777875	1	0.00375	0.46625	0.53	0	0	0	0	3	1.14E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216174726	7	8926667	C	T	-	-	-	-	-	-	39	0	0	86	9	10.46511628	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.307797538	0.307797538	1	0.315	0.6775	0.0075	0	0	0	0	2	6.35E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216174784	7	9482118	G	T	-	-	-	-	-	-	33	0	0	78	10	12.82051282	1	0	0	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.377073906	0.377073906	1	0.14625	0.81125	0.0425	0	0	0	0	2	9.02E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216174887	7	10329374	A	T	-	-	-	-	-	-	45	0	0	78	21	26.92307692	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.791855204	0.791855204	1	0	0.00375	0.99625	0	0	0	0	3	1.99E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216174981	7	11164822	A	T	PHF14	CCDS47541.1	r.?	-	-	intronic	43	0	0	85	19	22.35294118	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.657439446	0.657439446	1	0	0.1025	0.8975	0	0	0	0	3	5.93E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216175008	7	11313081	C	T	-	-	-	-	-	-	31	0	0	79	13	16.4556962	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.483991065	0.483991065	1	0.025	0.72875	0.24625	0	0	0	0	2	2.37E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216175081	7	11964831	G	T	-	-	-	-	-	-	30	0	0	93	23	24.7311828	0	0	NA	0	0	NA							2	1	1	1	NA	NA	NA	unphased	0.727387729	0.727387729	1	0	0.01375	0.98625	0	0	0	0	3	3.18E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216175269	7	13411345	C	T	-	-	-	-	-	-	39	0	0	41	10	24.3902439	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.961262554	0.961262554	1	0	0.00125	0.99875	0	0	0	0	3	9.51E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216175611	7	17154556	G	T	-	-	-	-	-	-	36	0	0	54	13	24.07407407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.948801743	0.948801743	1	0	0	1	0	0	0	0	3	1.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216175813	7	19769772	C	T	TMEM196	CCDS34607.2	r.?	-	-	intronic	35	0	0	19	5	26.31578947	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.037151703	1.037151703	1	0	0.005	0.995	0	0	0	0	3	3.43E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216175909	7	20998945	A	T	-	-	-	-	-	-	26	0	0	67	18	26.86567164	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	2.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216176422	7	25511035	C	T	-	-	-	-	-	-	30	0	0	62	7	11.29032258	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.444971537	0.444971537	1	0.05	0.4075	0.5425	0	0	0	0	3	3.02E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216176470	7	26116400	G	T	-	-	-	-	-	-	32	0	0	38	13	34.21052632	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.348297214	1.348297214	1	0	0	1	0	0	0	0	3	5.88E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216176993	7	31769574	G	T	-	-	-	-	-	-	33	0	0	41	11	26.82926829	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.057388809	1.057388809	1	0	0.00125	0.99875	0	0	0	0	3	1.34E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216177037	7	32193598	G	T	PDE1C	ENST00000396193	r.?	-	-	intronic	35	0	0	37	5	13.51351351	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.532591415	0.532591415	1	0.0075	0.08875	0.90375	0	0	0	0	3	1.19E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216177157	7	33131885	G	T	RP9	CCDS5440.1	r.?	-	-	downstream	37	0	0	40	10	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.0025	0.9975	0	0	0	0	3	7.22E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216177222	7	33812452	C	T	-	-	-	-	-	-	33	0	0	58	13	22.4137931	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.88336714	0.88336714	1	0	0.00375	0.99625	0	0	0	0	3	3.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216177413	7	35482441	C	T	-	-	-	-	-	-	28	0	0	62	16	25.80645161	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.017077799	1.017077799	1	0	0.00125	0.99875	0	0	0	0	3	3.36E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216177637	7	37849417	C	T	EPDR1	ENST00000476620	r.?	-	-	intronic	41	0	0	65	12	18.46153846	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.72760181	0.72760181	1	0	0.02375	0.97625	0	0	0	0	3	7.70E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216177671	7	38093991	A	T	-	-	-	-	-	-	38	0	0	74	20	27.02702703	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.06518283	1.06518283	1	0	0	1	0	0	0	0	3	4.34E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216177881	7	40479419	C	T	C7orf10	ENST00000309930	r.?	-	-	intronic	34	0	0	57	17	29.8245614	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.175438596	1.175438596	1	0	0	1	0	0	0	0	3	8.82E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216177943	7	41230649	G	T	-	-	-	-	-	-	36	0	0	99	24	24.24242424	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.95543672	0.95543672	1	0	0	1	0	0	0	0	3	2.52E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216177999	7	41951907	A	T	-	-	-	-	-	-	38	0	0	48	11	22.91666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.903186275	0.903186275	1	0	0.00375	0.99625	0	0	0	0	3	9.31E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216178030	7	42214971	C	T	GLI3	CCDS5465.1	r.?	-	-	intronic	32	0	0	38	11	28.94736842	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.140866873	1.140866873	1	0	0.00125	0.99875	0	0	0	0	3	5.19E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216178105	7	43019944	C	T	-	-	-	-	-	-	40	0	0	80	17	21.25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.8375	0.8375	1	0	0	1	0	0	0	0	3	5.75E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216178754	7	50664154	G	T	GRB10	CCDS43583.1	r.?	-	-	intronic	31	0	0	60	19	31.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.248039216	1.248039216	1	0	0	1	0	0	0	0	3	3.21E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216178958	7	52741548	A	T	-	-	-	-	-	-	36	0	0	28	9	32.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.266806723	1.266806723	1	0	0	1	0	0	0	0	3	1.24E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216179232	7	53448068	C	T	-	-	-	-	-	-	26	1	3.846153846	52	13	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0	1	0	0	0	0	3	6.47E-19	0.122190858	1	1	NA	NA	NA
1353824	PD9772b	1216179607	7	56539177	C	T	-	-	-	-	-	-	29	0	0	68	25	36.76470588	0	0	NA	0	0	NA							3.20903053	2	1	0.79096947	2	2	0.20903053	unphased	1.525811397	0.851947184	1.79096947	0	0.00125	0.99875	0	0	0	0	3	6.41E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216179624	7	56644203	G	T	-	-	-	-	-	-	41	0	0	98	33	33.67346939	0	0	NA	0	0	NA							3.20903053	2	1	0.79096947	2	2	0.20903053	unphased	1.397518684	0.780314074	1.79096947	0	0.005	0.995	0	0	0	0	3	1.12E-50	1	1	1	NA	NA	NA
1353824	PD9772b	1216179677	7	56964408	A	T	-	-	-	-	-	-	28	0	0	38	9	23.68421053	0	0	NA	0	0	NA							3.20903053	2	1	0.79096947	2	2	0.20903053	unphased	0.982943763	0.982943763	1	0	0.00625	0.99375	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216185264	7	63495257	A	T	-	-	-	-	-	-	25	0	0	68	9	13.23529412	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	0.640309281	0.714060384	0.896715873	0	0.025	0.975	0	0	0	0	3	7.38E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216185401	7	64388539	C	T	ZNF273	CCDS5528.2	r.904c>u	c.833C>T	p.T278I	missense	32	0	0	83	21	25.30120482	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	1.224045051	1.224045051	1	0	0	1	0	0	0	0	3	8.70E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216186021	7	65317355	G	T	AC008267.2	ENST00000418858	r.?	-	-	intronic	30	0	0	41	9	21.95121951	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	1.061976368	1.061976368	1	0	0.00625	0.99375	0	0	0	0	3	5.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216186105	7	65892244	G	T	AC008267.2	ENST00000418858	r.?	-	-	intronic	26	0	0	85	15	17.64705882	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	0.853745708	0.952080512	0.896715873	0	0.0025	0.9975	0	0	0	0	3	3.95E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216186165	7	66321970	G	T	-	-	-	-	-	-	30	0	0	59	8	13.55932203	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	0.655985403	0.731542088	0.896715873	0	0.03875	0.96125	0	0	0	0	3	6.90E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216186198	7	66535934	C	T	TYW1	CCDS5538.1	r.?	-	-	intronic	29	0	0	40	6	15	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	0.725683852	0.809268435	0.896715873	0	0.01125	0.98875	0	0	0	0	3	5.18E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216186243	7	66724571	A	T	-	-	-	-	-	-	33	0	0	63	13	20.63492063	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	0.998295246	0.998295246	1	0	0.00125	0.99875	0	0	0	0	3	1.01E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216186372	7	67464747	A	T	-	-	-	-	-	-	32	0	0	81	21	25.92592593	0	0	NA	0	0	NA							3.896715873	2	1	0.103284127	2	2	0.896715873	unphased	1.254268385	1.254268385	1	0	0	1	0	0	0	0	3	4.88E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216187494	7	73888611	C	T	GTF2IRD1	CCDS5571.1	r.?	-	-	intronic	29	0	0	21	7	33.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.647058824	1.647058824	1	0	0	1	0	0	0	0	3	8.54E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216187989	7	77789490	A	T	MAGI2	CCDS5594.1	r.2951u>a	c.2697T>A	p.A899A	silent	37	0	0	29	4	13.79310345	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.681541582	0.681541582	1	0.00625	0.04875	0.945	0	0	0	0	3	1.34E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216188093	7	78388332	G	T	MAGI2	CCDS5594.1	r.?	-	-	intronic	42	0	0	66	11	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.0075	0.9925	0	0	0	0	3	4.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216188121	7	78630595	G	T	MAGI2	CCDS5594.1	r.?	-	-	intronic	53	1	1.886792453	59	14	23.72881356	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.172482552	1.172482552	1	0	0	1	0	0	0	0	3	6.58E-20	0.233303855	1	1	NA	NA	NA
1353824	PD9772b	1216188231	7	79570556	C	T	-	-	-	-	-	-	44	0	0	74	16	21.62162162	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06836248	1.06836248	1	0	0.00125	0.99875	0	0	0	0	3	7.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216188729	7	83680000	C	T	SEMA3A	CCDS5599.1	r.?	-	-	intronic	23	0	0	57	11	19.29824561	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.953560372	0.953560372	1	0	0.005	0.995	0	0	0	0	3	7.29E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216189083	7	86267483	G	T	-	-	-	-	-	-	43	0	0	81	19	23.45679012	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.159041394	1.159041394	1	0	0	1	0	0	0	0	3	2.15E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216189188	7	87194939	A	T	ABCB1	CCDS5608.1	r.?	-	-	intronic	31	0	0	88	22	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	5.27E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216189227	7	87531125	C	T	DBF4	CCDS5611.1	r.?	-	-	intronic	43	0	0	74	11	14.86486486	208	0	0	266	39	14.66165414							4	2	2	1	NA	NA	NA	unphased	0.734499205	0.734499205	1	0.00125	0.015	0.98375	0	0	0	0	3	1.53E-13	1	5.84E-44	1	YES	somatic	1_1
1353824	PD9772b	1216189400	7	88990253	G	T	-	-	-	-	-	-	38	0	0	94	17	18.08510638	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.893617021	0.893617021	1	0	0.00375	0.99625	0	0	0	0	3	1.12E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216189451	7	89475394	G	T	-	-	-	-	-	-	36	0	0	66	13	19.6969697	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.973262032	0.973262032	1	0	0.00125	0.99875	0	0	0	0	3	1.95E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216189474	7	89653014	C	T	-	-	-	-	-	-	40	0	0	78	18	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	6.10E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216189476	7	89666496	C	T	-	-	-	-	-	-	34	0	0	87	14	16.09195402	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.795131846	0.795131846	1	0	0.01375	0.98625	0	0	0	0	3	2.35E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216189867	7	92592938	A	T	-	-	-	-	-	-	33	0	0	88	24	27.27272727	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.347593583	1.347593583	1	0	0	1	0	0	0	0	3	1.03E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216189994	7	93891468	G	T	-	-	-	-	-	-	35	0	0	62	12	19.35483871	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.762808349	0.762808349	1	0	0.015	0.985	0	0	0	0	3	4.19E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216190219	7	96911236	C	T	-	-	-	-	-	-	37	0	0	54	12	22.22222222	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.875816993	0.875816993	1	0	0.0025	0.9975	0	0	0	0	3	6.90E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216190563	7	99892021	A	T	-	-	-	-	-	-	32	0	0	28	3	10.71428571	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.529411765	0.529411765	1	0.01	0.06	0.93	0	0	0	0	3	0.000372895	1	1	1	NA	NA	NA
1353824	PD9772b	1216190586	7	100102453	C	T	-	-	-	-	-	-	26	0	0	35	13	37.14285714	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.835294118	0.917647059	2	0	0.0025	0.9975	0	0	0	0	3	1.63E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216190873	7	102389967	G	T	FAM185A	CCDS47676.1	r.313g>u	c.313G>T	p.V105L	missense	36	0	0	6	4	66.66666667	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	3.294117647	1.098039216	3	0	0.00625	0.99375	0	0	0	0	3	9.30E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216191247	7	104536338	G	T	LHFPL3	ENST00000424859	r.?	-	-	intronic	30	0	0	71	16	22.53521127	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.113504557	1.113504557	1	0	0.00125	0.99875	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216191395	7	105528574	A	T	-	-	-	-	-	-	32	0	0	51	12	23.52941176	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0.00125	0.99875	0	0	0	0	3	3.24E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216193426	7	120906170	C	T	C7orf58	CCDS34739.1	r.?	-	-	intronic	31	0	0	68	23	33.82352941	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.671280277	0.835640138	2	0	0.00375	0.99625	0	0	0	0	3	7.70E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216193530	7	121624627	C	T	PTPRZ1	CCDS34740.1	r.?	-	-	intronic	40	0	0	79	33	41.7721519	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.064035741	1.03201787	2	0	0	1	0	0	0	0	3	1.74E-54	1	1	1	NA	NA	NA
1353824	PD9772b	1216193805	7	123552293	C	T	-	-	-	-	-	-	35	0	0	79	24	30.37974684	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.501116902	0.750558451	2	0	0.01	0.99	0	0	0	0	3	5.20E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216193946	7	124567749	C	T	POT1	CCDS5793.1	r.?	-	-	intronic	48	0	0	79	35	44.30379747	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.189128816	1.094564408	2	0	0	1	0	0	0	0	3	7.65E-59	1	1	1	NA	NA	NA
1353824	PD9772b	1216194323	7	127196103	C	T	-	-	-	-	-	-	33	0	0	53	23	43.39622642	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.144284129	1.072142064	2	0	0	1	0	0	0	0	3	6.43E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216194397	7	127787295	G	T	-	-	-	-	-	-	35	0	0	76	33	43.42105263	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.145510836	1.072755418	2	0	0	1	0	0	0	0	3	3.39E-55	1	1	1	NA	NA	NA
1353824	PD9772b	1216194727	7	129924763	C	T	CPA2	CCDS5817.2	r.?	-	-	intronic	28	0	0	17	8	47.05882353	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.325259516	1.162629758	2	0	0	1	0	0	0	0	3	9.12E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216195131	7	133182516	G	T	EXOC4	CCDS5829.1	r.?	-	-	intronic	23	0	0	42	19	45.23809524	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.235294118	1.117647059	2	0	0	1	0	0	0	0	3	7.64E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216195134	7	133208145	A	T	EXOC4	CCDS5829.1	r.?	-	-	intronic	29	0	0	77	32	41.55844156	0	0	NA	1	1	100							4	3	1	1	NA	NA	NA	unphased	2.053475936	1.026737968	2	0	0	1	0	0	0	0	3	8.63E-53	1	0.005	1	NA	NA	NA
1353824	PD9772b	1216195251	7	134122943	G	T	AKR1B1	CCDS5831.1	r.?	-	-	downstream	41	0	0	40	17	42.5	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.1	1.05	2	0	0	1	0	0	0	0	3	6.07E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216195303	7	134439080	G	T	CALD1	CCDS5834.1	r.?	-	-	intronic	40	0	0	54	27	50	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.470588235	0.823529412	3	0	0.00125	0.99875	0	0	0	0	3	1.27E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1216195504	7	136011741	A	T	-	-	-	-	-	-	39	0	0	88	38	43.18181818	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	2.13368984	1.06684492	2	0	0	1	0	0	0	0	3	3.32E-63	1	1	1	NA	NA	NA
1353824	PD9772b	1216195789	7	137772545	G	T	AKR1D1	CCDS5846.1	r.?	-	-	intronic	37	0	0	63	24	38.0952381	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.882352941	0.941176471	2	0	0.00125	0.99875	0	0	0	0	3	7.74E-39	1	1	1	NA	NA	NA
1353824	PD9772b	1216196341	7	141615035	C	T	OR9A4	CCDS43661.1	r.?	-	-	upstream	37	0	0	105	19	18.0952381	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.075070028	1.075070028	1	0	0	1	0	0	0	0	3	4.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216196738	7	142683006	A	T	-	-	-	-	-	-	39	0	0	120	21	17.5	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.039705882	1.039705882	1	0	0	1	0	0	0	0	3	4.17E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216197132	7	145431673	C	T	-	-	-	-	-	-	51	0	0	115	45	39.13043478	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.324808184	1.162404092	2	0	0	1	0	0	0	0	3	4.12E-72	1	1	1	NA	NA	NA
1353824	PD9772b	1216197245	7	146123330	G	T	CNTNAP2	CCDS5889.1	r.?	-	-	intronic	20	0	0	44	7	15.90909091	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.945187166	0.945187166	1	0	0.00625	0.99375	0	0	0	0	3	2.55E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216197364	7	146980408	G	T	CNTNAP2	CCDS5889.1	r.?	-	-	intronic	45	0	0	99	38	38.38383838	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.280451575	1.140225787	2	0	0	1	0	0	0	0	3	9.49E-61	1	1	1	NA	NA	NA
1353824	PD9772b	1216198815	7	154159903	A	T	DPP6	ENST00000404039	r.?	-	-	intronic	21	0	0	39	10	25.64102564	0	0	NA	0	0	NA							1.393758832	1	0	0.606241168	1	1	0.393758832	unphased	0.59870136	0.59870136	1	0.005	0.14375	0.85125	0	0	0	0	3	5.44E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216198878	7	154853907	G	T	ENSG00000220575	ENST00000395731	r.?	-	-	downstream	34	0	0	36	10	27.77777778	0	0	NA	0	0	NA							1.393758832	1	0	0.606241168	1	1	0.393758832	unphased	0.64859314	0.64859314	1	0	0.07375	0.92625	0	0	0	0	3	2.21E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216199655	8	2082707	G	T	MYOM2	CCDS5957.1	r.?	-	-	intronic	30	0	0	46	12	26.08695652	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.028132992	1.028132992	1	0	0.00125	0.99875	0	0	0	0	3	8.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216199724	8	2659689	G	T	-	-	-	-	-	-	40	0	0	58	17	29.31034483	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.155172414	1.155172414	1	0	0	1	0	0	0	0	3	1.24E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216199916	8	4276451	C	T	-	-	-	-	-	-	39	0	0	56	5	8.928571429	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.351890756	0.351890756	1	0.11625	0.55375	0.33	0	0	0	0	2	9.65E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216200144	8	6091503	G	T	-	-	-	-	-	-	35	0	0	74	18	24.32432432	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.958664547	0.958664547	1	0	0.00125	0.99875	0	0	0	0	3	2.13E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216200843	8	11874611	A	T	-	-	-	-	-	-	23	0	0	79	19	24.05063291	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.947877885	0.947877885	1	0	0.0025	0.9975	0	0	0	0	3	1.27E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216201174	8	12808828	C	T	-	-	-	-	-	-	19	0	0	26	5	19.23076923	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.757918552	0.757918552	1	0.00125	0.0225	0.97625	0	0	0	0	3	1.88E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216201311	8	13786239	C	T	-	-	-	-	-	-	31	0	0	47	13	27.65957447	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.090112641	1.090112641	1	0	0.00125	0.99875	0	0	0	0	3	1.47E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216201548	8	15993178	G	T	MSR1	CCDS5995.1	r.?	-	-	intronic	64	0	0	67	16	23.88059701	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.941176471	0.941176471	1	0	0.00125	0.99875	0	0	0	0	3	1.35E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216201861	8	19021142	A	T	-	-	-	-	-	-	38	0	0	42	11	26.19047619	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.032212885	1.032212885	1	0	0.0025	0.9975	0	0	0	0	3	1.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216202044	8	20946099	C	T	-	-	-	-	-	-	24	0	0	74	19	25.67567568	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.011923688	1.011923688	1	0	0	1	0	0	0	0	3	3.14E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216202381	8	24395344	A	T	-	-	-	-	-	-	35	0	0	70	22	31.42857143	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.238655462	1.238655462	1	0	0	1	0	0	0	0	3	1.63E-33	1	1	1	NA	NA	NA
1353824	PD9772b	1216203121	8	31844592	G	T	NRG1	CCDS47836.1	r.?	-	-	intronic	36	0	0	54	13	24.07407407	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.948801743	0.948801743	1	0	0.0025	0.9975	0	0	0	0	3	1.12E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216203350	8	34294530	A	T	-	-	-	-	-	-	36	0	0	70	19	27.14285714	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.069747899	1.069747899	1	0	0	1	0	0	0	0	3	9.50E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216203474	8	35861191	C	T	-	-	-	-	-	-	40	0	0	61	14	22.95081967	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.904532305	0.904532305	1	0	0.0025	0.9975	0	0	0	0	3	1.10E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216205013	8	48028294	C	T	-	-	-	-	-	-	43	0	0	87	27	31.03448276	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.53346856	0.76673428	2	0	0.00375	0.99625	0	0	0	0	3	1.30E-40	1	1	1	NA	NA	NA
1353824	PD9772b	1216205076	8	48687608	C	T	PRKDC	ENST00000314191	r.?	-	-	intronic	26	0	0	42	7	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.02125	0.97875	0	0	0	0	3	1.81E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216205274	8	50633121	C	T	-	-	-	-	-	-	52	0	0	79	12	15.18987342	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.750558451	0.750558451	1	0	0.025	0.975	0	0	0	0	3	9.17E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216205480	8	52292647	C	T	PXDNL	CCDS47855.1	r.?	-	-	intronic	46	0	0	92	18	19.56521739	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.966751918	0.966751918	1	0	0.0025	0.9975	0	0	0	0	3	1.58E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216205511	8	52579138	C	T	PXDNL	CCDS47855.1	r.?	-	-	intronic	32	0	0	75	15	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.005	0.995	0	0	0	0	3	5.25E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216205677	8	53893266	C	T	-	-	-	-	-	-	29	0	0	67	18	26.86567164	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.327480246	1.327480246	1	0	0	1	0	0	0	0	3	2.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216205698	8	54114464	G	T	-	-	-	-	-	-	42	0	0	119	34	28.57142857	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.697478992	0.848739496	2	0	0	1	0	0	0	0	3	2.58E-49	1	1	1	NA	NA	NA
1353824	PD9772b	1216205699	8	54114465	G	T	-	-	-	-	-	-	42	0	0	120	34	28.33333333	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.683333333	0.841666667	2	0	0.00125	0.99875	0	0	0	0	3	3.58E-49	1	1	1	NA	NA	NA
1353824	PD9772b	1216205729	8	54264475	A	T	-	-	-	-	-	-	29	0	0	95	23	24.21052632	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.438390093	0.719195046	2	0	0.035	0.965	0	0	0	0	3	5.51E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216206050	8	56526099	C	T	-	-	-	-	-	-	32	0	0	80	10	12.5	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.742647059	0.742647059	1	0.00125	0.02	0.97875	0	0	0	0	3	1.17E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216206238	8	57694204	G	T	-	-	-	-	-	-	33	0	0	88	15	17.04545455	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.012700535	1.012700535	1	0	0.005	0.995	0	0	0	0	3	6.87E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216206444	8	59192494	G	T	-	-	-	-	-	-	28	0	0	74	20	27.02702703	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.3354531	1.3354531	1	0	0	1	0	0	0	0	3	4.34E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216206522	8	59790118	C	T	TOX	CCDS34897.1	r.?	-	-	intronic	43	0	0	97	22	22.68041237	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.347483323	1.347483323	1	0	0	1	0	0	0	0	3	5.74E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216207150	8	63848188	A	T	-	-	-	-	-	-	36	0	0	92	13	14.13043478	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.839514066	0.839514066	1	0	0.005	0.995	0	0	0	0	3	1.89E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216207272	8	64650622	A	T	-	-	-	-	-	-	38	0	0	94	21	22.34042553	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.327284105	1.327284105	1	0	0	1	0	0	0	0	3	1.60E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216207833	8	69051686	A	T	PREX2	CCDS6201.1	r.?	-	-	intronic	43	0	0	74	8	10.81081081	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.642289348	0.642289348	1	0.00125	0.04625	0.9525	0	0	0	0	3	4.39E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216207974	8	69888238	C	T	-	-	-	-	-	-	30	0	0	81	16	19.75308642	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.173565723	1.173565723	1	0	0.00125	0.99875	0	0	0	0	3	3.77E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216208010	8	70068277	G	T	-	-	-	-	-	-	44	0	0	83	19	22.89156627	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.360028349	1.360028349	1	0	0	1	0	0	0	0	3	3.60E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216208093	8	70716198	A	T	SLCO5A1	CCDS6205.1	r.?	-	-	intronic	31	0	0	91	11	12.08791209	0	0	NA	1	0	0							5	3	2	1	NA	NA	NA	unphased	0.718164189	0.718164189	1	0.00125	0.03125	0.9675	0	0	0	0	3	1.60E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216208147	8	70964612	G	T	PRDM14	CCDS6206.1	r.?	-	-	intronic	26	0	0	64	10	15.625	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.928308824	0.928308824	1	0	0.00625	0.99375	0	0	0	0	3	1.16E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216208170	8	71136541	C	T	NCOA2	CCDS47872.1	r.?	-	-	intronic	26	0	0	105	18	17.14285714	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.018487395	1.018487395	1	0	0	1	0	0	0	0	3	2.02E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216208290	8	71846910	G	T	-	-	-	-	-	-	41	0	0	98	19	19.3877551	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.151860744	1.151860744	1	0	0	1	0	0	0	0	3	1.13E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216208605	8	74444528	A	T	STAU2	ENST00000343268	r.?	-	-	intronic	42	0	0	80	11	13.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.679411765	0.679411765	1	0	0.0525	0.9475	0	0	0	0	3	3.73E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216208747	8	75639402	A	T	-	-	-	-	-	-	28	0	0	74	7	9.459459459	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.467408585	0.467408585	1	0.03375	0.3	0.66625	0	0	0	0	3	1.05E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216209031	8	77887041	G	T	-	-	-	-	-	-	30	0	0	73	9	12.32876712	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.60918614	0.60918614	1	0.00375	0.08125	0.915	0	0	0	0	3	1.42E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216209429	8	80838089	G	T	MRPS28	CCDS6226.1	r.?	-	-	intronic	34	0	0	81	14	17.28395062	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.026870007	1.026870007	1	0	0	1	0	0	0	0	3	8.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216209615	8	81875661	G	T	PAG1	CCDS6227.1	r.?	-	-	downstream	40	0	0	113	24	21.23893805	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.26184279	1.26184279	1	0	0	1	0	0	0	0	3	8.46E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216209690	8	82486126	C	T	-	-	-	-	-	-	32	0	0	89	36	40.4494382	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.403172505	0.801057502	3	0	0.0025	0.9975	0	0	0	0	3	1.17E-58	1	1	1	NA	NA	NA
1353824	PD9772b	1216210488	8	87069235	A	T	PSKH2	CCDS6240.1	r.?	-	-	intronic	44	0	0	84	12	14.28571429	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.848739496	0.848739496	1	0	0.00625	0.99375	0	0	0	0	3	1.98E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216210810	8	88961865	A	T	-	-	-	-	-	-	33	0	0	94	12	12.76595745	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.75844806	0.75844806	1	0.00125	0.0125	0.98625	0	0	0	0	3	7.98E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216211272	8	92478687	A	T	-	-	-	-	-	-	43	0	0	99	18	18.18181818	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.080213904	1.080213904	1	0	0	1	0	0	0	0	3	6.53E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216211287	8	92616914	G	T	-	-	-	-	-	-	43	0	0	84	11	13.0952381	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.778011204	0.778011204	1	0	0.01375	0.98625	0	0	0	0	3	6.49E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216211337	8	92966190	C	T	RUNX1T1	CCDS47891.1	r.?	-	-	downstream	47	0	0	83	25	30.12048193	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.789510985	0.894755493	2	0	0	1	0	0	0	0	3	2.44E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216211458	8	93790836	A	T	-	-	-	-	-	-	28	0	0	80	6	7.5	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.445588235	0.445588235	1	0.0275	0.29125	0.68125	0	0	0	0	3	3.42E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216211462	8	93877605	C	T	-	-	-	-	-	-	36	0	0	88	18	20.45454545	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.215240642	1.215240642	1	0	0	1	0	0	0	0	3	6.62E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216211860	8	96165905	A	T	PLEKHF2	CCDS6267.1	r.?	-	-	intronic	33	0	0	91	20	21.97802198	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.30575307	1.30575307	1	0	0	1	0	0	0	0	3	4.44E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216211889	8	96409715	A	T	-	-	-	-	-	-	25	0	0	79	17	21.51898734	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.278481013	1.278481013	1	0	0	1	0	0	0	0	3	4.55E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216211932	8	96702003	A	T	-	-	-	-	-	-	35	0	0	94	12	12.76595745	0	0	NA	1	1	100							5	3	2	1	NA	NA	NA	unphased	0.75844806	0.75844806	1	0	0.02375	0.97625	0	0	0	0	3	7.98E-14	1	0.005	1	NA	NA	NA
1353824	PD9772b	1216211975	8	96960220	G	T	-	-	-	-	-	-	36	0	0	88	22	25	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.485294118	0.742647059	2	0	0.00625	0.99375	0	0	0	0	3	5.27E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216212067	8	97537770	C	T	SDC2	CCDS6272.1	r.?	-	-	intronic	30	0	0	63	16	25.3968254	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.508870215	0.754435107	2	0	0.02125	0.97875	0	0	0	0	3	4.48E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216212129	8	98059148	G	T	ENSG00000104324	CCDS6273.1	r.?	-	-	intronic	21	0	0	121	27	22.31404959	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.325717064	1.325717064	1	0	0	1	0	0	0	0	3	3.23E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216212225	8	98753707	G	T	-	-	-	-	-	-	25	0	0	49	8	16.32653061	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.969987995	0.969987995	1	0	0.0075	0.9925	0	0	0	0	3	1.47E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216212599	8	101055512	G	T	RGS22	CCDS43758.1	r.?	-	-	intronic	24	0	0	72	16	22.22222222	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.623614669	0.811807335	2	0	0.00875	0.99125	0	0	0	0	3	4.82E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216212705	8	101689183	G	T	-	-	-	-	-	-	30	0	0	82	13	15.85365854	269	0	0	134	29	21.64179104							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.158310465	1.158310465	1	0	0	1	0	0	0	0	3	3.95E-16	1	2.33E-38	1	YES	somatic	1_1
1353824	PD9772b	1216212900	8	102569660	C	T	GRHL2	CCDS34931.1	r.?	-	-	intronic	35	0	0	65	10	15.38461538	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.124040925	1.124040925	1	0	0.00375	0.99625	0	0	0	0	3	1.36E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216213101	8	103624187	G	T	-	-	-	-	-	-	34	0	0	41	6	14.63414634	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.06920966	1.06920966	1	0	0.0075	0.9925	0	0	0	0	3	6.05E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216213211	8	104149707	C	T	BAALC	CCDS6297.1	r.?	-	-	upstream	32	0	0	120	21	17.5	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.278596552	1.278596552	1	0	0	1	0	0	0	0	3	4.17E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216213344	8	105018271	A	T	RIMS2	ENST00000507740	r.?	-	-	intronic	46	0	0	82	8	9.756097561	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.71280644	0.71280644	1	0	0.0325	0.9675	0	0	0	0	3	1.00E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216213363	8	105145230	C	T	RIMS2	ENST00000507740	r.?	-	-	intronic	39	0	0	107	14	13.08411215	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.955960039	0.955960039	1	0	0.0025	0.9975	0	0	0	0	3	4.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216213550	8	106119924	C	T	-	-	-	-	-	-	35	0	0	109	17	15.59633028	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.139509378	1.139509378	1	0	0	1	0	0	0	0	3	1.61E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216213592	8	106332586	A	T	ZFPM2	CCDS47908.1	r.?	-	-	intronic	27	0	0	75	11	14.66666667	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.071585682	1.071585682	1	0	0.00375	0.99625	0	0	0	0	3	1.78E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216213643	8	106629784	G	T	ZFPM2	CCDS47908.1	r.?	-	-	intronic	30	0	0	103	25	24.27184466	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.773365537	0.886682768	2	0	0.00125	0.99875	0	0	0	0	3	1.15E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216213697	8	107176178	C	T	-	-	-	-	-	-	40	0	0	109	31	28.44036697	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	2.077928866	1.038964433	2	0	0	1	0	0	0	0	3	4.94E-45	1	1	1	NA	NA	NA
1353824	PD9772b	1216213705	8	107225960	A	T	-	-	-	-	-	-	45	0	0	84	20	23.80952381	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.739587146	0.869793573	2	0	0.00125	0.99875	0	0	0	0	3	7.54E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216213736	8	107476850	A	T	OXR1	CCDS47909.1	r.?	-	-	intronic	19	0	0	88	13	14.77272727	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.079334752	1.079334752	1	0	0.00125	0.99875	0	0	0	0	3	1.03E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216214122	8	109659593	G	T	-	-	-	-	-	-	30	0	0	78	11	14.1025641	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.030370848	1.030370848	1	0	0.00375	0.99625	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216214419	8	111466594	C	T	-	-	-	-	-	-	25	0	0	87	10	11.49425287	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.839800691	0.839800691	1	0	0.015	0.985	0	0	0	0	3	2.75E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216214440	8	111562964	C	T	-	-	-	-	-	-	48	0	0	109	27	24.7706422	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.809809012	0.904904506	2	0	0	1	0	0	0	0	3	1.40E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216215081	8	115267389	G	T	-	-	-	-	-	-	42	0	0	26	4	15.38461538	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.124040925	1.124040925	1	0	0.01375	0.98625	0	0	0	0	3	8.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216215131	8	115705813	A	T	-	-	-	-	-	-	29	0	0	114	11	9.649122807	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.70499058	0.70499058	1	0	0.03	0.97	0	0	0	0	3	1.96E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216215154	8	115861241	G	T	-	-	-	-	-	-	21	0	0	105	16	15.23809524	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.113335773	1.113335773	1	0	0	1	0	0	0	0	3	3.14E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216215246	8	116370724	G	T	-	-	-	-	-	-	27	0	0	55	9	16.36363636	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.195570802	1.195570802	1	0	0.00125	0.99875	0	0	0	0	3	1.01E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216215655	8	118884062	C	T	EXT1	CCDS6324.1	r.?	-	-	intronic	35	0	0	77	8	10.38961039	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.759092573	0.759092573	1	0	0.02	0.98	0	0	0	0	3	6.05E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216215773	8	119464002	G	T	SAMD12	CCDS47913.1	r.?	-	-	intronic	37	0	0	93	11	11.82795699	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.864182001	0.864182001	1	0.00125	0.00375	0.995	0	0	0	0	3	2.04E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216215837	8	119854606	C	T	-	-	-	-	-	-	20	0	0	111	26	23.42342342	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.711377624	0.855688812	2	0	0.00375	0.99625	0	0	0	0	3	1.53E-35	1	1	1	NA	NA	NA
1353824	PD9772b	1216215942	8	120431397	G	T	NOV	CCDS6328.1	r.810g>u	c.589G>T	p.V197L	missense	21	0	0	88	16	18.18181818	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.328412002	1.328412002	1	0	0	1	0	0	0	0	3	1.57E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216215948	8	120463558	C	T	-	-	-	-	-	-	44	0	0	113	27	23.89380531	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.745744976	0.872872488	2	0	0.00125	0.99875	0	0	0	0	3	4.16E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216216158	8	121258892	C	T	COL14A1	CCDS34938.1	r.?	-	-	intronic	27	0	0	85	20	23.52941176	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.719121415	0.859560707	2	0	0.00125	0.99875	0	0	0	0	3	9.82E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216216527	8	123112751	G	T	-	-	-	-	-	-	35	0	0	100	10	10	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	0.730626601	0.730626601	1	0	0.02625	0.97375	0	0	0	0	3	1.12E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216217234	8	127231674	A	T	-	-	-	-	-	-	27	0	0	104	18	17.30769231	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.26454604	1.26454604	1	0	0.00125	0.99875	0	0	0	0	3	1.68E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216217239	8	127300412	G	T	-	-	-	-	-	-	37	0	0	80	12	15	0	0	NA	0	0	NA							6.365089541	3	3	0.634910459	4	3	0.365089541	unphased	1.095939902	1.095939902	1	0	0.00125	0.99875	0	0	0	0	3	1.07E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216217715	8	129435632	G	T	-	-	-	-	-	-	22	0	0	53	6	11.32075472	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	0.746130266	1.148527275	0.649640877	0	0.0175	0.9825	0	0	0	0	3	2.93E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216217795	8	129955813	A	T	-	-	-	-	-	-	20	0	0	82	16	19.51219512	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.286013141	1.286013141	1	0	0	1	0	0	0	0	3	4.67E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216217849	8	130245722	A	T	AC103833.1	ENST00000509893	r.?	-	-	intronic	24	0	0	118	53	44.91525424	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	2.960282368	0.986760789	3	0	0	1	0	0	0	0	3	1.07E-88	1	1	1	NA	NA	NA
1353824	PD9772b	1216218095	8	131651451	G	T	-	-	-	-	-	-	28	0	0	88	25	28.40909091	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.872391292	0.936195646	2	0	0	1	0	0	0	0	3	1.33E-36	1	1	1	NA	NA	NA
1353824	PD9772b	1216218469	8	133837200	G	T	PHF20L1	CCDS6367.2	r.?	-	-	intronic	35	0	0	119	51	42.85714286	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	2.824636006	0.941545335	3	0	0	1	0	0	0	0	3	4.61E-84	1	1	1	NA	NA	NA
1353824	PD9772b	1216218727	8	135382496	G	T	-	-	-	-	-	-	32	0	0	112	24	21.42857143	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.412318003	0.856136643	1.649640877	0	0.0025	0.9975	0	0	0	0	3	6.70E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216218849	8	136136812	G	T	-	-	-	-	-	-	35	0	0	53	26	49.05660377	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	3.233231152	1.077743717	3	0	0	1	0	0	0	0	3	1.27E-45	1	1	1	NA	NA	NA
1353824	PD9772b	1216218945	8	136717261	C	T	-	-	-	-	-	-	30	0	0	93	31	33.33333333	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	2.196939116	1.098469558	2	0	0	1	0	0	0	0	3	1.54E-47	1	1	1	NA	NA	NA
1353824	PD9772b	1216219428	8	139071881	G	T	-	-	-	-	-	-	36	0	0	111	42	37.83783784	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	2.49382278	0.941192749	2.649640877	0	0	1	0	0	0	0	3	1.19E-66	1	1	1	NA	NA	NA
1353824	PD9772b	1216219715	8	140544454	G	T	-	-	-	-	-	-	31	0	0	117	16	13.67521368	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	0.901308355	0.901308355	1	0	0.00375	0.99625	0	0	0	0	3	1.91E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216219732	8	140712084	A	T	KCNK9	CCDS6377.1	r.?	-	-	intronic	48	0	0	65	14	21.53846154	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	1.419560659	1.419560659	1	0	0	1	0	0	0	0	3	2.93E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216219736	8	140760710	G	T	TRAPPC9	CCDS34946.1	r.?	-	-	intronic	23	0	0	11	4	36.36363636	0	0	NA	0	0	NA							5.649640877	3	2	0.350359123	4	2	0.649640877	unphased	2.396660854	2.396660854	1	0.00125	0.00125	0.99625	0	0.00125	0	0	3	2.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216219908	8	141958553	C	T	PTK2	CCDS6381.1	r.?	-	-	intronic	32	0	0	103	18	17.47572816	0	0	NA	0	0	NA							0.196534454	0	0	0.803465546	1	0	0.196534454	unphased	0.198823268	1.011645869	0.196534454	0	0	1	0	0	0	0	3	1.40E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216219984	8	142885386	A	T	-	-	-	-	-	-	31	0	0	73	15	20.54794521	0	0	NA	0	0	NA							0.196534454	0	0	0.803465546	1	0	0.196534454	unphased	0.233776217	1.189492289	0.196534454	0	0	1	0	0	0	0	3	3.38E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216220784	9	1984539	C	T	-	-	-	-	-	-	31	0	0	123	21	17.07317073	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	1.18507891	1.18507891	1	0	0	1	0	0	0	0	3	7.24E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216220979	9	3051056	A	T	-	-	-	-	-	-	40	0	0	120	64	53.33333333	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.701960784	0.925490196	4	0	0	1	0	0	0	0	3	3.05E-113	1	1	1	NA	NA	NA
1353824	PD9772b	1216221862	9	7084186	C	T	KDM4C	CCDS6471.1	r.?	-	-	intronic	37	0	0	111	64	57.65765766	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.002119767	1.000529942	4	0	0	1	0	0	0	0	3	2.31E-116	1	1	1	NA	NA	NA
1353824	PD9772b	1216222072	9	8280832	G	T	-	-	-	-	-	-	31	0	0	100	12	12	2	0	0	1	1	100							6	5	1	1	NA	NA	NA	unphased	0.832941176	0.832941176	1	0	0.01	0.99	0	0	0	0	3	1.71E-13	1	0.005	1	NA	NA	NA
1353824	PD9772b	1216222367	9	9575975	C	T	PTPRD	CCDS43786.1	r.?	-	-	intronic	39	0	0	103	62	60.19417476	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.178183895	1.044545974	4	0	0	1	0	0	0	0	3	1.67E-114	1	1	1	NA	NA	NA
1353824	PD9772b	1216222390	9	9660879	C	T	PTPRD	CCDS43786.1	r.?	-	-	intronic	46	0	0	114	7	6.140350877	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	0.42621259	0.42621259	1	0.05125	0.45	0.49875	0	0	0	0	3	2.01E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216222686	9	10873981	C	T	-	-	-	-	-	-	36	0	0	132	77	58.33333333	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.049019608	1.012254902	4	0	0	1	0	0	0	0	3	3.06E-140	1	1	1	NA	NA	NA
1353824	PD9772b	1216222889	9	11736874	A	T	-	-	-	-	-	-	31	0	0	113	69	61.0619469	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.238417491	1.059604373	4	0	0	1	0	0	0	0	3	6.69E-128	1	1	1	NA	NA	NA
1353824	PD9772b	1216223887	9	16380473	G	T	-	-	-	-	-	-	41	0	0	113	17	15.04424779	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	1.044247788	1.044247788	1	0	0.0025	0.9975	0	0	0	0	3	3.06E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216224341	9	18594862	G	T	ADAMTSL1	CCDS47954.1	r.?	-	-	intronic	48	0	0	100	57	57	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.956470588	0.989117647	4	0	0	1	0	0	0	0	3	2.14E-103	1	1	1	NA	NA	NA
1353824	PD9772b	1216224530	9	19265767	C	T	-	-	-	-	-	-	36	0	0	114	22	19.29824561	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	1.339525284	1.339525284	1	0	0	1	0	0	0	0	3	2.79E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216224659	9	19768016	C	T	SLC24A2	CCDS6493.1	r.?	-	-	intronic	26	0	0	107	67	62.61682243	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.346344145	1.086586036	4	0	0	1	0	0	0	0	3	2.29E-125	1	1	1	NA	NA	NA
1353824	PD9772b	1216224707	9	19962500	A	T	-	-	-	-	-	-	37	1	2.702702703	88	52	59.09090909	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	4.101604278	1.02540107	4	0	0	1	0	0	0	0	3	1.15E-95	0.169281299	1	1	NA	NA	NA
1353824	PD9772b	1216224820	9	20670349	C	T	KIAA1797	CCDS34993.1	r.?	-	-	intronic	35	0	0	106	34	32.0754717	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	2.226415094	1.113207547	2	0	0	1	0	0	0	0	3	2.60E-51	1	1	1	NA	NA	NA
1353824	PD9772b	1216225977	9	30731524	G	T	-	-	-	-	-	-	32	0	0	97	54	55.67010309	0	0	NA	0	0	NA							6	5	1	1	NA	NA	NA	unphased	3.864160097	0.966040024	4	0	0	1	0	0	0	0	3	3.10E-97	1	1	1	NA	NA	NA
1353824	PD9772b	1216227235	9	36208264	G	T	CLTA	CCDS6601.1	r.?	-	-	intronic	25	0	0	106	58	54.71698113	0	0	NA	0	0	NA							4.816361473	4	0	0.183638527	4	1	0.816361473	unphased	3.15035095	0.989544172	3.183638527	0	0	1	0	0	0	0	3	1.08E-103	1	1	1	NA	NA	NA
1353824	PD9772b	1216227370	9	36775677	G	T	-	-	-	-	-	-	35	0	0	68	41	60.29411765	0	0	NA	0	0	NA							4.816361473	4	0	0.183638527	4	1	0.816361473	unphased	3.471456701	1.090405419	3.183638527	0	0	1	0	0	0	0	3	2.71E-76	1	1	1	NA	NA	NA
1353824	PD9772b	1216227557	9	38140461	C	T	-	-	-	-	-	-	34	0	0	78	11	14.1025641	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	0.696832579	0.696832579	1	0	0.0375	0.9625	0	0	0	0	3	2.79E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216227725	9	39479114	G	T	-	-	-	-	-	-	6	0	0	14	4	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0.005	0.995	0	0	0	0	3	6.01E-07	1	1	1	NA	NA	NA
1353824	PD9772b	1216228027	9	43505141	G	T	-	-	-	-	-	-	33	0	0	36	9	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.00375	0.99625	0	0	0	0	3	1.63E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216228948	9	47163231	G	T	-	-	-	-	-	-	8	0	0	46	7	15.2173913	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.751918159	0.751918159	1	0.0025	0.0275	0.97	0	0	0	0	3	3.53E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216235740	9	70126511	C	T	-	-	-	-	-	-	55	0	0	62	8	12.90322581	0	0	NA	1	0	0							4	2	2	1	NA	NA	NA	unphased	0.637571157	0.637571157	1	0	0.07375	0.92625	0	0	0	0	3	1.04E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216236153	9	72152542	C	T	APBA1	CCDS6630.1	r.?	-	-	intronic	41	0	0	87	25	28.73563218	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.419878296	0.709939148	2	0	0.0325	0.9675	0	0	0	0	3	9.55E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216236340	9	73503594	C	T	TRPM3	CCDS43835.1	r.?	-	-	intronic	36	0	0	54	10	18.51851852	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.91503268	0.91503268	1	0	0.00875	0.99125	0	0	0	0	3	1.91E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216236375	9	73786589	G	T	TRPM3	ENST00000357533	r.?	-	-	intronic	25	0	0	86	18	20.93023256	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.034199726	1.034199726	1	0	0.00125	0.99875	0	0	0	0	3	4.22E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216236414	9	74032171	A	T	TRPM3	ENST00000357533	r.?	-	-	intronic	38	0	0	88	17	19.31818182	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.954545455	0.954545455	1	0	0	1	0	0	0	0	3	3.34E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216236432	9	74088560	C	T	-	-	-	-	-	-	37	0	0	103	16	15.53398058	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.767561393	0.767561393	1	0	0.01125	0.98875	0	0	0	0	3	2.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216236782	9	76440225	A	T	-	-	-	-	-	-	31	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0.00375	0.99625	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216236785	9	76461049	C	T	-	-	-	-	-	-	32	0	0	69	14	20.28985507	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.002557545	1.002557545	1	0	0.00375	0.99625	0	0	0	0	3	7.30E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216236829	9	76700136	C	T	-	-	-	-	-	-	28	0	0	87	19	21.83908046	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.079107505	1.079107505	1	0	0	1	0	0	0	0	3	9.64E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216236844	9	76828439	G	T	-	-	-	-	-	-	40	0	0	79	34	43.03797468	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	2.126582278	1.063291139	2	0	0	1	0	0	0	0	3	1.18E-56	1	1	1	NA	NA	NA
1353824	PD9772b	1216236861	9	76959697	C	T	-	-	-	-	-	-	31	0	0	90	22	24.44444444	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.207843137	1.207843137	1	0	0	1	0	0	0	0	3	9.17E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216237196	9	79485298	C	T	PRUNE2	CCDS47982.1	r.?	-	-	intronic	27	0	0	41	7	17.07317073	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.843615495	0.843615495	1	0	0.02	0.98	0	0	0	0	3	1.51E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216237570	9	82409623	A	T	-	-	-	-	-	-	25	0	0	81	20	24.69135802	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.220043573	1.220043573	1	0	0	1	0	0	0	0	3	3.35E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216237844	9	84239096	C	T	TLE1	CCDS6661.1	r.?	-	-	intronic	30	0	0	100	23	23	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.136470588	1.136470588	1	0	0.00125	0.99875	0	0	0	0	3	2.05E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216237872	9	84396531	G	T	-	-	-	-	-	-	43	0	0	66	12	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.005	0.995	0	0	0	0	3	9.36E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216237898	9	84664034	G	T	-	-	-	-	-	-	37	0	0	90	19	21.11111111	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.043137255	1.043137255	1	0	0.00125	0.99875	0	0	0	0	3	1.95E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216238249	9	87155658	A	T	-	-	-	-	-	-	39	0	0	68	20	29.41176471	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.453287197	0.726643599	2	0	0.0275	0.9725	0	0	0	0	3	6.23E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216238447	9	88724816	G	T	-	-	-	-	-	-	34	0	0	47	7	14.89361702	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.7359199	0.7359199	1	0.0025	0.02375	0.97375	0	0	0	0	3	4.12E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216238645	9	90145442	C	T	DAPK1	CCDS43842.1	r.?	-	-	intronic	30	0	0	72	19	26.38888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.303921569	1.303921569	1	0	0.00125	0.99875	0	0	0	0	3	1.75E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216238761	9	90977078	G	T	-	-	-	-	-	-	39	0	0	17	4	23.52941176	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.162629758	1.162629758	1	0	0.00875	0.99125	0	0	0	0	3	1.41E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216238770	9	91015397	C	T	SPIN1	CCDS43843.1	r.?	-	-	intronic	34	0	0	56	12	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.00125	0.99875	0	0	0	0	3	1.11E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216239081	9	94188882	C	T	NFIL3	CCDS6690.1	r.?	-	-	upstream	29	0	0	77	16	20.77922078	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.026737968	1.026737968	1	0	0.0025	0.9975	0	0	0	0	3	1.56E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216239199	9	95226893	A	T	CENPP	CCDS35063.1	r.?	-	-	intronic	37	0	0	85	14	16.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.81384083	0.81384083	1	0	0.00625	0.99375	0	0	0	0	3	1.66E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216239258	9	95769411	A	T	FGD3	CCDS43849.1	r.?	-	-	intronic	38	0	0	19	4	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0.01125	0.98875	0	0	0	0	3	2.28E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216239347	9	96688815	G	T	-	-	-	-	-	-	32	0	0	75	15	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.0025	0.9975	0	0	0	0	3	5.25E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216239958	9	101477175	C	T	-	-	-	-	-	-	39	0	0	85	28	32.94117647	174	0	0	251	68	27.09163347							5	3	2	1	NA	NA	NA	unphased	1.957093426	0.978546713	2	0	0	1	0	0	0	0	3	6.45E-43	1	3.71E-95	1	YES	somatic	1_1
1353824	PD9772b	1216239974	9	101650461	C	T	-	-	-	-	-	-	24	0	0	80	15	18.75	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.113970588	1.113970588	1	0	0	1	0	0	0	0	3	1.49E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216240000	9	101853222	A	T	-	-	-	-	-	-	24	0	0	79	11	13.92405063	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.82725242	0.82725242	1	0	0.0075	0.9925	0	0	0	0	3	3.23E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216240232	9	103630686	A	T	-	-	-	-	-	-	33	0	0	106	12	11.32075472	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.672586016	0.672586016	1	0.0025	0.04875	0.94875	0	0	0	0	3	3.48E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216240285	9	103984318	C	T	ENSG00000148123	CCDS6751.1	r.?	-	-	intronic	44	0	0	100	11	11	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.653529412	0.653529412	1	0.00125	0.07	0.92875	0	0	0	0	3	4.60E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216240290	9	104068798	C	T	ENSG00000148123	CCDS6751.1	r.?	-	-	intronic	46	0	0	95	14	14.73684211	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.875541796	0.875541796	1	0	0.00375	0.99625	0	0	0	0	3	8.54E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216240291	9	104076494	C	T	ENSG00000148123	CCDS6751.1	r.?	-	-	intronic	37	0	0	91	22	24.17582418	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.436328378	0.718164189	2	0	0.02625	0.97375	0	0	0	0	3	1.20E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216240293	9	104089403	A	T	ENSG00000148123	CCDS6751.1	r.?	-	-	downstream	30	0	0	85	18	21.17647059	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.258131488	1.258131488	1	0	0.00125	0.99875	0	0	0	0	3	3.35E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216240306	9	104199782	G	T	ALDOB	CCDS6756.1	r.?	-	-	upstream	36	0	0	82	8	9.756097561	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.579626973	0.579626973	1	0.00875	0.09	0.90125	0	0	0	0	3	1.00E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216240325	9	104256303	C	T	C9orf125	CCDS6757.1	r.?	-	-	intronic	57	0	0	112	19	16.96428571	1	0	0	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.007878151	1.007878151	1	0	0	1	0	0	0	0	3	1.72E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216240437	9	104936868	C	T	-	-	-	-	-	-	29	0	0	55	10	18.18181818	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.080213904	1.080213904	1	0	0.00125	0.99875	0	0	0	0	3	2.33E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216240438	9	104938708	G	T	-	-	-	-	-	-	43	0	0	93	23	24.7311828	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.469323213	0.734661607	2	0	0.02125	0.97875	0	0	0	0	3	3.18E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216240439	9	104938741	C	T	-	-	-	-	-	-	41	0	0	99	26	26.26262626	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.560308972	0.780154486	2	0	0.0075	0.9925	0	0	0	0	3	5.42E-37	1	1	1	NA	NA	NA
1353824	PD9772b	1216240658	9	106651303	A	T	-	-	-	-	-	-	28	0	0	78	13	16.66666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.990196078	0.990196078	1	0	0.00125	0.99875	0	0	0	0	3	1.99E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216240731	9	107166193	C	T	-	-	-	-	-	-	35	0	0	83	11	13.25301205	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.787384833	0.787384833	1	0	0.0125	0.9875	0	0	0	0	3	5.66E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216240746	9	107253768	G	T	-	-	-	-	-	-	45	0	0	100	14	14	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.831764706	0.831764706	1	0	0.00875	0.99125	0	0	0	0	3	1.80E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216241030	9	108804034	G	T	-	-	-	-	-	-	36	0	0	94	16	17.0212766	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.01126408	1.01126408	1	0	0.00125	0.99875	0	0	0	0	3	4.85E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216241563	9	111720977	A	T	CTNNAL1	CCDS6775.1	r.?	-	-	intronic	31	0	0	52	14	26.92307692	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.599547511	0.799773756	2	0	0.00875	0.99125	0	0	0	0	3	9.04E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216241617	9	111980552	C	T	EPB41L4B	CCDS43859.1	r.?	-	-	intronic	18	0	0	65	7	10.76923077	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.639819005	0.639819005	1	0.00375	0.05625	0.94	0	0	0	0	3	4.22E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216241868	9	113255482	G	T	SVEP1	CCDS48004.1	r.?	-	-	intronic	22	0	0	70	11	15.71428571	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.933613445	0.933613445	1	0	0.005	0.995	0	0	0	0	3	8.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216241880	9	113309648	G	T	SVEP1	CCDS48004.1	r.?	-	-	intronic	45	0	0	102	15	14.70588235	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.873702422	0.873702422	1	0	0.00625	0.99375	0	0	0	0	3	7.08E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216242177	9	114785104	C	T	-	-	-	-	-	-	33	0	0	27	4	14.81481481	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.880174292	0.880174292	1	0	0.01625	0.98375	0	0	0	0	3	1.00E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216242183	9	114809018	A	T	SUSD1	CCDS6783.1	r.?	-	-	intronic	43	0	0	96	14	14.58333333	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.866421569	0.866421569	1	0	0.00625	0.99375	0	0	0	0	3	9.96E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216242268	9	115120963	G	T	-	-	-	-	-	-	34	0	0	67	15	22.3880597	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.330114135	1.330114135	1	0	0	1	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216242710	9	118226089	G	T	-	-	-	-	-	-	28	0	0	66	19	28.78787879	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.134581105	1.134581105	1	0	0	1	0	0	0	0	3	2.64E-28	1	1	1	NA	NA	NA
1353824	PD9772b	1216242989	9	120821993	G	T	-	-	-	-	-	-	25	0	0	64	16	25	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.985294118	0.985294118	1	0	0.00375	0.99625	0	0	0	0	3	5.94E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216243351	9	124812827	C	T	TTLL11	CCDS48012.1	r.?	-	-	intronic	36	0	0	55	17	30.90909091	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.218181818	1.218181818	1	0	0	1	0	0	0	0	3	4.35E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216243525	9	126616416	C	T	DENND1A	CCDS35133.1	r.?	-	-	intronic	28	0	0	62	19	30.64516129	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.207779886	1.207779886	1	0	0	1	0	0	0	0	3	6.66E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216243743	9	128901432	G	T	-	-	-	-	-	-	31	0	0	66	15	22.72727273	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.895721925	0.895721925	1	0	0.00375	0.99625	0	0	0	0	3	6.45E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216243870	9	130360597	G	T	-	-	-	-	-	-	22	0	0	30	8	26.66666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0.00625	0.99375	0	0	0	0	3	2.07E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216244016	9	132549546	G	T	-	-	-	-	-	-	23	0	0	29	17	58.62068966	163	0	0	20	2	10							3	2	1	1	NA	NA	NA	unphased	2.310344828	1.155172414	2	0	0	1	0	0	0	0	3	3.74E-32	1	0.004473894	1	NA	NA	NA
1353824	PD9772b	1216244810	X	2976956	C	T	ARSF	CCDS14123.1	r.?	-	-	intronic	41	0	0	80	17	21.25	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	5.75E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216245003	X	4514335	C	T	-	-	-	-	-	-	41	0	0	70	11	15.71428571	0	0	NA	0	0	NA							#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	#N/A	8.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216245136	X	5198911	C	T	-	-	-	-	-	-	32	0	0	75	15	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00125	0.99875	0	0	0	0	3	5.25E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216245208	X	5582291	A	T	-	-	-	-	-	-	36	0	0	65	15	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	5.00E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216245280	X	6095588	A	T	NLGN4X	CCDS14126.1	r.?	-	-	intronic	35	0	0	60	10	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01625	0.98375	0	0	0	0	3	5.86E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216245306	X	6285815	G	T	-	-	-	-	-	-	34	0	0	72	19	26.38888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.303921569	1.303921569	1	0	0	1	0	0	0	0	3	1.75E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216245794	X	9455089	A	T	TBL1X	CCDS14133.1	r.?	-	-	intronic	43	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0	1	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216245809	X	9703674	C	T	GPR143	CCDS14134.1	r.?	-	-	intronic	32	0	0	74	17	22.97297297	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.135135135	1.135135135	1	0	0	1	0	0	0	0	3	1.34E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216245819	X	9740733	G	T	GPR143	ENST00000447366	r.?	-	-	intronic	29	0	0	40	9	22.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.111764706	1.111764706	1	0	0.00375	0.99625	0	0	0	0	3	4.64E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216245859	X	10058172	G	T	WWC3	CCDS14136.1	r.?	-	-	intronic	42	0	0	44	10	22.72727273	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.122994652	1.122994652	1	0	0.00125	0.99875	0	0	0	0	3	2.08E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216245912	X	10508701	C	T	MID1	CCDS14138.1	r.?	-	-	intronic	32	0	0	77	11	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.0025	0.02625	0.97125	0	0	0	0	3	2.41E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216245921	X	10610110	G	T	MID1	CCDS14138.1	r.?	-	-	intronic	29	0	0	78	19	24.35897436	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.20361991	1.20361991	1	0	0.0025	0.9975	0	0	0	0	3	9.67E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216246125	X	12886100	C	T	TLR7	CCDS14151.1	r.?	-	-	intronic	21	0	0	68	12	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.00625	0.99375	0	0	0	0	3	1.37E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216246752	X	20423115	A	T	-	-	-	-	-	-	33	0	0	67	21	31.34328358	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0	1	0	0	0	0	3	4.96E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216247029	X	23854760	C	T	APOO	CCDS14208.1	r.?	-	-	intronic	13	0	0	27	6	22.22222222	0	0	NA	0	0	NA							4	3	1	1	NA	NA	NA	unphased	1.098039216	1.098039216	1	0	0.005	0.995	0	0	0	0	3	4.23E-09	1	1	1	NA	NA	NA
1353824	PD9772b	1216247222	X	25916005	C	T	-	-	-	-	-	-	34	0	0	61	12	19.67213115	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.775313404	0.775313404	1	0	0.01375	0.98625	0	0	0	0	3	3.39E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216247339	X	27456924	G	T	-	-	-	-	-	-	31	0	0	75	20	26.66666667	1	0	0	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.050980392	1.050980392	1	0	0	1	0	0	0	0	3	5.89E-29	1	1	1	NA	NA	NA
1353824	PD9772b	1216247985	X	34560941	C	T	-	-	-	-	-	-	33	0	0	74	18	24.32432432	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.958664547	0.958664547	1	0	0	1	0	0	0	0	3	2.13E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216248095	X	36062020	C	T	CXorf59	CCDS14238.1	r.?	-	-	upstream	41	0	0	22	5	22.72727273	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.895721925	0.895721925	1	0	0.01625	0.98375	0	0	0	0	3	7.67E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216248105	X	36207389	G	T	-	-	-	-	-	-	47	0	0	53	11	20.75471698	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.817980022	0.817980022	1	0	0.01125	0.98875	0	0	0	0	3	3.07E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216248348	X	38844341	C	T	-	-	-	-	-	-	33	0	0	58	12	20.68965517	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.815415822	0.815415822	1	0.00125	0.01	0.98875	0	0	0	0	3	1.76E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216248407	X	39704894	A	T	-	-	-	-	-	-	38	0	0	19	9	47.36842105	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.866873065	0.933436533	2	0.00125	0.0075	0.99125	0	0	0	0	3	1.72E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216248452	X	40337415	G	T	-	-	-	-	-	-	32	0	0	34	7	20.58823529	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	0.811418685	0.811418685	1	0	0.01375	0.98625	0	0	0	0	3	3.73E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216248545	X	41230989	C	T	-	-	-	-	-	-	33	0	0	25	8	32	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.261176471	1.261176471	1	0	0	1	0	0	0	0	3	3.92E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216248643	X	42364067	G	T	-	-	-	-	-	-	31	0	0	48	17	35.41666667	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.395833333	1.395833333	1	0	0	1	0	0	0	0	3	2.80E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216248763	X	43861259	G	T	-	-	-	-	-	-	27	0	0	57	25	43.85964912	0	0	NA	0	0	NA							3	2	1	1	NA	NA	NA	unphased	1.728586171	0.864293086	2	0	0.00125	0.99875	0	0	0	0	3	2.54E-42	1	1	1	NA	NA	NA
1353824	PD9772b	1216249322	X	50799728	G	T	-	-	-	-	-	-	36	0	0	57	20	35.0877193	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.73374613	0.866873065	2	0	0.00375	0.99625	0	0	0	0	3	9.67E-32	1	1	1	NA	NA	NA
1353824	PD9772b	1216249324	X	50863623	A	T	-	-	-	-	-	-	26	0	0	70	17	24.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.2	1.2	1	0	0	1	0	0	0	0	3	4.68E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216249352	X	51248003	C	T	-	-	-	-	-	-	30	0	0	84	18	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0	1	0	0	0	0	3	2.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216249643	X	54090182	G	T	FAM120C	CCDS14356.1	r.?	-	-	downstream	24	0	0	39	5	12.82051282	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.633484163	0.633484163	1	0.0025	0.05875	0.93875	0	0	0	0	3	1.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216249850	X	55993505	A	T	-	-	-	-	-	-	34	0	0	75	17	22.66666667	2	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.12	1.12	1	0	0.00125	0.99875	0	0	0	0	3	1.72E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216249884	X	56265337	A	T	KLF8	CCDS14373.1	r.?	-	-	intronic	32	0	0	76	14	18.42105263	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.910216718	0.910216718	1	0	0.0075	0.9925	0	0	0	0	3	3.14E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216249991	X	57129138	C	T	-	-	-	-	-	-	39	0	0	79	15	18.98734177	0	0	NA	2	0	0							4	2	2	1	NA	NA	NA	unphased	0.938198064	0.938198064	1	0	0	1	0	0	0	0	3	1.22E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216250096	X	58178601	C	T	-	-	-	-	-	-	30	0	0	73	16	21.91780822	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.082997583	1.082997583	1	0	0.00125	0.99875	0	0	0	0	3	6.15E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216251288	X	62308792	C	T	-	-	-	-	-	-	23	0	0	67	12	17.91044776	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.884986831	0.884986831	1	0	0.00625	0.99375	0	0	0	0	3	1.14E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216251740	X	66059177	C	T	-	-	-	-	-	-	22	0	0	65	17	26.15384615	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.292307692	1.292307692	1	0	0	1	0	0	0	0	3	1.14E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216251771	X	66275942	C	T	-	-	-	-	-	-	39	0	0	71	12	16.90140845	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.835128418	0.835128418	1	0	0.0075	0.9925	0	0	0	0	3	2.38E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216252048	X	68599520	A	T	-	-	-	-	-	-	37	0	0	42	11	26.19047619	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.294117647	1.294117647	1	0	0.00125	0.99875	0	0	0	0	3	1.81E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216252051	X	68638985	G	T	-	-	-	-	-	-	38	0	0	52	8	15.38461538	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.760180995	0.760180995	1	0	0.02125	0.97875	0	0	0	0	3	2.42E-10	1	1	1	NA	NA	NA
1353824	PD9772b	1216252078	X	68803088	C	T	-	-	-	-	-	-	30	0	0	82	28	34.14634146	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.68723099	0.843615495	2	0	0	1	0	0	0	0	3	1.94E-43	1	1	1	NA	NA	NA
1353824	PD9772b	1216252106	X	68944621	G	T	EDA	CCDS14394.1	r.?	-	-	intronic	30	0	0	76	12	15.78947368	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.780185759	0.780185759	1	0	0.0175	0.9825	0	0	0	0	3	5.63E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216252417	X	71381086	G	T	-	-	-	-	-	-	24	0	0	57	14	24.56140351	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.213622291	1.213622291	1	0	0.0025	0.9975	0	0	0	0	3	3.84E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216252425	X	71478827	G	T	PIN4	ENST00000496835	r.?	-	-	intronic	26	0	0	74	12	16.21621622	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.80127186	0.80127186	1	0	0.01125	0.98875	0	0	0	0	3	4.02E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216252559	X	72665693	C	T	CDX4	CCDS14424.1	r.?	-	-	upstream	33	0	0	87	14	16.09195402	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.795131846	0.795131846	1	0	0.01	0.99	0	0	0	0	3	2.35E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216252635	X	73304385	C	T	-	-	-	-	-	-	31	0	0	71	10	14.08450704	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.695940348	0.695940348	1	0	0.03375	0.96625	0	0	0	0	3	3.42E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216252660	X	73571539	C	T	-	-	-	-	-	-	33	0	0	80	19	23.75	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.173529412	1.173529412	1	0	0	1	0	0	0	0	3	1.65E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216252681	X	73806078	A	T	RLIM	CCDS14427.1	r.7291u>a	c.?	p.?	3'UTR variant	31	0	0	76	17	22.36842105	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.105263158	1.105263158	1	0	0.005	0.995	0	0	0	0	3	2.21E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216252707	X	74105359	C	T	KIAA2022	CCDS35337.1	r.?	-	-	intronic	25	0	0	55	10	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.005	0.995	0	0	0	0	3	2.33E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216252720	X	74194152	C	T	-	-	-	-	-	-	35	0	0	83	19	22.89156627	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.131112686	1.131112686	1	0	0	1	0	0	0	0	3	3.60E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216253146	X	78227254	C	T	-	-	-	-	-	-	33	0	0	55	11	20	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.988235294	0.988235294	1	0	0.00375	0.99625	0	0	0	0	3	4.77E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216253235	X	78791577	A	T	-	-	-	-	-	-	34	0	0	64	10	15.625	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.772058824	0.772058824	1	0.00125	0.00875	0.99	0	0	0	0	3	1.16E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216253404	X	80117709	G	T	-	-	-	-	-	-	42	0	0	84	18	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.00125	0.99875	0	0	0	0	3	2.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216253410	X	80197257	G	T	-	-	-	-	-	-	39	0	0	89	12	13.48314607	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.666226041	0.666226041	1	0.00125	0.055	0.94375	0	0	0	0	3	4.06E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216253442	X	80558892	C	T	SH3BGRL	CCDS14449.1	r.?	-	-	downstream	27	0	0	81	17	20.98765432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.037037037	1.037037037	1	0	0.00125	0.99875	0	0	0	0	3	7.24E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216253462	X	80699320	C	T	-	-	-	-	-	-	36	0	0	30	4	13.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.658823529	0.658823529	1	0.00375	0.035	0.96125	0	0	0	0	3	1.54E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216253542	X	81492412	G	T	-	-	-	-	-	-	22	0	0	103	20	19.41747573	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.959451742	0.959451742	1	0	0	1	0	0	0	0	3	6.62E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216253563	X	81908184	A	T	-	-	-	-	-	-	35	0	0	80	10	12.5	120	0	0	105	17	16.19047619							4	2	2	1	NA	NA	NA	unphased	0.617647059	0.617647059	1	0.00125	0.08375	0.915	0	0	0	0	3	1.17E-11	1	8.25E-21	1	YES	somatic	1_1
1353824	PD9772b	1216253713	X	83566666	G	T	-	-	-	-	-	-	21	0	0	75	13	17.33333333	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.856470588	0.856470588	1	0	0.00875	0.99125	0	0	0	0	3	1.16E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216253790	X	84171935	A	T	-	-	-	-	-	-	44	0	0	84	18	21.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.058823529	1.058823529	1	0	0.00125	0.99875	0	0	0	0	3	2.65E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216253845	X	84596763	G	T	POF1B	CCDS14452.1	r.?	-	-	intronic	41	1	2.43902439	74	20	27.02702703	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.3354531	1.3354531	1	0	0	1	0	0	0	0	3	4.34E-29	0.18577148	1	1	NA	NA	NA
1353824	PD9772b	1216254087	X	86458688	C	T	-	-	-	-	-	-	43	0	0	66	17	25.75757576	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.272727273	1.272727273	1	0	0	1	0	0	0	0	3	1.52E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216254194	X	87520189	A	T	-	-	-	-	-	-	28	0	0	66	12	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.0025	0.9975	0	0	0	0	3	9.36E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216254248	X	87861683	G	T	-	-	-	-	-	-	33	0	0	76	15	19.73684211	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0.0025	0.9975	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216254262	X	87989568	C	T	-	-	-	-	-	-	34	0	0	35	6	17.14285714	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.847058824	0.847058824	1	0	0.02	0.98	0	0	0	0	3	2.24E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216254323	X	88405374	C	T	-	-	-	-	-	-	28	0	0	86	17	19.76744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976744186	0.976744186	1	0	0.00125	0.99875	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216254572	X	90007460	A	T	-	-	-	-	-	-	32	0	0	95	13	13.68421053	0	0	NA	0	0	NA							4.615834634	2	2	0.384165366	3	2	0.615834634	unphased	0.760433099	1.2348008	0.615834634	0	0	1	0	0	0	0	3	2.91E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216254642	X	90726508	G	T	-	-	-	-	-	-	32	0	0	82	14	17.07317073	0	0	NA	0	0	NA							4.615834634	2	2	0.384165366	3	2	0.615834634	unphased	0.948757993	0.948757993	1	0	0.005	0.995	0	0	0	0	3	9.77E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216254709	X	91407020	A	T	PCDH11X	CCDS14461.1	r.?	-	-	intronic	18	0	0	59	9	15.25423729	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.753738784	0.753738784	1	0	0.015	0.985	0	0	0	0	3	1.96E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216254750	X	91696860	G	T	PCDH11X	CCDS14461.1	r.?	-	-	intronic	23	0	0	39	5	12.82051282	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.633484163	0.633484163	1	0.0025	0.06375	0.93375	0	0	0	0	3	1.56E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216254788	X	92216027	C	T	-	-	-	-	-	-	20	0	0	32	4	12.5	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.617647059	0.617647059	1	0.00125	0.0575	0.94125	0	0	0	0	3	2.01E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216254818	X	92382715	C	T	-	-	-	-	-	-	30	0	0	86	19	22.09302326	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.091655267	1.091655267	1	0	0	1	0	0	0	0	3	7.57E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216254849	X	92671296	A	T	-	-	-	-	-	-	42	0	0	86	17	19.76744186	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.976744186	0.976744186	1	0	0	1	0	0	0	0	3	2.19E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216254867	X	92784246	C	T	-	-	-	-	-	-	16	0	0	39	9	23.07692308	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.140271493	1.140271493	1	0	0	1	0	0	0	0	3	3.62E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216254906	X	93148805	C	T	-	-	-	-	-	-	30	0	0	69	14	20.28985507	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.002557545	1.002557545	1	0	0	1	0	0	0	0	3	7.30E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216254915	X	93322370	C	T	-	-	-	-	-	-	35	0	0	77	13	16.88311688	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.834224599	0.834224599	1	0	0.0075	0.9925	0	0	0	0	3	1.67E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216255020	X	94054044	C	T	-	-	-	-	-	-	39	1	2.564102564	30	8	26.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.317647059	1.317647059	1	0	0.0025	0.99625	0	0.00125	0	0	3	2.07E-12	0.177567718	1	1	NA	NA	NA
1353824	PD9772b	1216255102	X	94588439	G	T	-	-	-	-	-	-	28	0	0	79	19	24.05063291	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.188384214	1.188384214	1	0	0	1	0	0	0	0	3	1.27E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216255111	X	94621697	C	T	-	-	-	-	-	-	27	0	0	73	21	28.76712329	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.421434327	0.710717164	2	0	0.045	0.955	0	0	0	0	3	4.03E-31	1	1	1	NA	NA	NA
1353824	PD9772b	1216255150	X	94971863	C	T	-	-	-	-	-	-	30	0	0	62	14	22.58064516	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.115749526	1.115749526	1	0	0	1	0	0	0	0	3	1.42E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216255164	X	95021789	G	T	-	-	-	-	-	-	29	0	0	72	19	26.38888889	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.303921569	1.303921569	1	0	0	1	0	0	0	0	3	1.75E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216255583	X	98329804	C	T	-	-	-	-	-	-	32	0	0	74	16	21.62162162	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.06836248	1.06836248	1	0	0.00125	0.99875	0	0	0	0	3	7.81E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216255596	X	98449250	G	T	-	-	-	-	-	-	37	0	0	88	18	20.45454545	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.010695187	1.010695187	1	0	0	1	0	0	0	0	3	6.62E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216255640	X	98867318	A	T	-	-	-	-	-	-	42	0	0	69	12	17.39130435	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.859335038	0.859335038	1	0	0.01125	0.98875	0	0	0	0	3	1.65E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216255647	X	99003996	C	T	-	-	-	-	-	-	35	0	0	87	19	21.83908046	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.079107505	1.079107505	1	0	0.0025	0.9975	0	0	0	0	3	9.64E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216255922	X	100827125	G	T	-	-	-	-	-	-	38	0	0	56	13	23.21428571	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.147058824	1.147058824	1	0	0	1	0	0	0	0	3	1.89E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216256134	X	103047602	A	T	PLP1	CCDS14513.1	r.?	-	-	downstream	38	0	0	89	15	16.85393258	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.832782551	0.832782551	1	0	0.00875	0.99125	0	0	0	0	3	8.23E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216256242	X	103945280	A	T	IL1RAPL2	CCDS14517.1	r.?	-	-	intronic	38	0	0	75	14	18.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.922352941	0.922352941	1	0	0.00125	0.99875	0	0	0	0	3	2.57E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216256430	X	106012572	C	T	RNF128	CCDS14521.1	r.?	-	-	intronic	32	0	0	68	17	25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.235294118	1.235294118	1	0	0.00125	0.99875	0	0	0	0	3	2.69E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216256519	X	106672667	G	T	-	-	-	-	-	-	36	0	0	54	9	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.0125	0.9875	0	0	0	0	3	8.48E-12	1	1	1	NA	NA	NA
1353824	PD9772b	1216256784	X	108896450	C	T	ACSL4	CCDS14548.1	r.?	-	-	intronic	25	0	0	85	15	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.00625	0.99375	0	0	0	0	3	3.95E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216257048	X	111466221	A	T	-	-	-	-	-	-	30	0	0	77	12	15.58441558	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.770053476	0.770053476	1	0	0.01375	0.98625	0	0	0	0	3	6.64E-15	1	1	1	NA	NA	NA
1353824	PD9772b	1216257100	X	111991968	G	T	-	-	-	-	-	-	35	0	0	77	13	16.88311688	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.834224599	0.834224599	1	0	0.0025	0.9975	0	0	0	0	3	1.67E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216257102	X	112029605	G	T	AMOT	CCDS48154.1	r.?	-	-	intronic	36	0	0	86	18	20.93023256	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.034199726	1.034199726	1	0	0.0025	0.9975	0	0	0	0	3	4.22E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216257386	X	114167907	G	T	-	-	-	-	-	-	30	0	0	64	13	20.3125	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.003676471	1.003676471	1	0	0.0025	0.9975	0	0	0	0	3	1.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216257500	X	114798576	C	T	PLS3	CCDS14568.1	r.?	-	-	intronic	32	0	0	84	15	17.85714286	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.882352941	0.882352941	1	0	0.005	0.995	0	0	0	0	3	3.27E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216257501	X	114809108	G	T	PLS3	CCDS14568.1	r.?	-	-	intronic	36	0	0	35	4	11.42857143	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.564705882	0.564705882	1	0.005	0.075	0.92	0	0	0	0	3	2.89E-05	1	1	1	NA	NA	NA
1353824	PD9772b	1216257841	X	117569271	C	T	WDR44	CCDS14572.1	r.?	-	-	intronic	40	0	0	34	6	17.64705882	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.871972318	0.871972318	1	0	0.01375	0.98625	0	0	0	0	3	1.86E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216258081	X	119458271	G	T	-	-	-	-	-	-	36	0	0	51	15	29.41176471	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.453287197	1.453287197	1	0	0	1	0	0	0	0	3	8.22E-23	1	1	1	NA	NA	NA
1353824	PD9772b	1216258097	X	119604596	G	T	LAMP2	CCDS14600.1	r.?	-	-	upstream	33	0	0	93	19	20.43010753	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.009487666	1.009487666	1	0	0.00125	0.99875	0	0	0	0	3	3.86E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216258128	X	119831353	C	T	ENSG00000228279	ENST00000439600	r.?	-	-	intronic	25	0	0	62	14	22.58064516	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.115749526	1.115749526	1	0	0	1	0	0	0	0	3	1.42E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216258177	X	120429458	G	T	-	-	-	-	-	-	30	0	0	90	15	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.01375	0.98625	0	0	0	0	3	9.83E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216258712	X	125112474	A	T	-	-	-	-	-	-	32	0	0	56	5	8.928571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.441176471	0.441176471	1	0.04	0.24875	0.71125	0	0	0	0	3	9.65E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216258713	X	125113953	C	T	-	-	-	-	-	-	34	0	0	76	16	21.05263158	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.040247678	1.040247678	1	0	0.00125	0.99875	0	0	0	0	3	1.25E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216258774	X	125579315	G	T	-	-	-	-	-	-	30	0	0	78	19	24.35897436	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.20361991	1.20361991	1	0	0.00125	0.99875	0	0	0	0	3	9.67E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216259017	X	127727823	C	T	-	-	-	-	-	-	34	0	0	79	23	29.11392405	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.438570365	0.719285182	2	0	0.0225	0.9775	0	0	0	0	3	4.43E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216259028	X	127818198	A	T	-	-	-	-	-	-	37	0	0	83	16	19.27710843	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.952515946	0.952515946	1	0	0.00375	0.99625	0	0	0	0	3	5.75E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216259094	X	128390227	C	T	-	-	-	-	-	-	36	0	0	67	15	22.3880597	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.106233538	1.106233538	1	0	0	1	0	0	0	0	3	8.27E-21	1	1	1	NA	NA	NA
1353824	PD9772b	1216259339	X	130721541	C	T	-	-	-	-	-	-	41	0	0	76	15	19.73684211	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.975232198	0.975232198	1	0	0	1	0	0	0	0	3	6.51E-20	1	1	1	NA	NA	NA
1353824	PD9772b	1216259530	X	132754644	G	T	GPC3	CCDS14638.1	r.?	-	-	intronic	45	0	0	68	22	32.35294118	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.598615917	0.799307958	2	0	0.01125	0.98875	0	0	0	0	3	7.67E-34	1	1	1	NA	NA	NA
1353824	PD9772b	1216259568	X	133313993	G	T	-	-	-	-	-	-	31	0	0	73	11	15.06849315	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.744560838	0.744560838	1	0	0.02375	0.97625	0	0	0	0	3	1.31E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216259693	X	134303364	G	T	CXorf48	CCDS14647.1	r.?	-	-	intronic	27	0	0	83	15	18.07228916	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.8929837	0.8929837	1	0	0.00125	0.99875	0	0	0	0	3	2.70E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216259707	X	134503830	C	T	-	-	-	-	-	-	24	0	0	87	20	22.98850575	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.135902637	1.135902637	1	0	0	1	0	0	0	0	3	1.65E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216259776	X	135097340	G	T	SLC9A6	CCDS44003.1	r.?	-	-	intronic	33	0	0	68	18	26.47058824	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.307958478	1.307958478	1	0	0	1	0	0	0	0	3	3.83E-26	1	1	1	NA	NA	NA
1353824	PD9772b	1216259813	X	135278640	G	T	FHL1	CCDS14655.1	r.?	-	-	intronic	30	0	0	77	14	18.18181818	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.898395722	0.898395722	1	0	0.0025	0.9975	0	0	0	0	3	3.82E-18	1	1	1	NA	NA	NA
1353824	PD9772b	1216259918	X	136161946	G	T	-	-	-	-	-	-	33	0	0	58	17	29.31034483	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.448275862	1.448275862	1	0	0	1	0	0	0	0	3	1.24E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216259919	X	136161947	G	T	-	-	-	-	-	-	34	0	0	56	16	28.57142857	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.411764706	1.411764706	1	0	0	1	0	0	0	0	3	5.26E-24	1	1	1	NA	NA	NA
1353824	PD9772b	1216260026	X	136989772	C	T	-	-	-	-	-	-	33	0	0	77	11	14.28571429	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.705882353	0.705882353	1	0.00125	0.03375	0.965	0	0	0	0	3	2.41E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216260117	X	137929183	G	T	FGF13	ENST00000370603	r.?	-	-	intronic	31	0	0	83	16	19.27710843	248	1	0.403225806	122	14	11.47540984							4	2	2	1	NA	NA	NA	unphased	0.952515946	0.952515946	1	0	0	1	0	0	0	0	3	5.75E-21	1	3.15E-15	0.711514476	YES	somatic	1_1
1353824	PD9772b	1216260229	X	138769679	C	T	MCF2	CCDS48175.1	r.?	-	-	intronic	37	0	0	73	11	15.06849315	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.744560838	0.744560838	1	0	0.03	0.97	0	0	0	0	3	1.31E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216260500	X	140876245	G	T	-	-	-	-	-	-	38	0	0	40	6	15	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.741176471	0.741176471	1	0	0.03	0.97	0	0	0	0	3	5.18E-08	1	1	1	NA	NA	NA
1353824	PD9772b	1216260596	X	141703897	C	T	-	-	-	-	-	-	34	0	0	71	19	26.76056338	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.322286661	1.322286661	1	0	0	1	0	0	0	0	3	1.29E-27	1	1	1	NA	NA	NA
1353824	PD9772b	1216260618	X	141861560	G	T	-	-	-	-	-	-	14	0	0	90	15	16.66666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.823529412	0.823529412	1	0	0.00625	0.99375	0	0	0	0	3	9.83E-19	1	1	1	NA	NA	NA
1353824	PD9772b	1216260634	X	142025641	A	T	-	-	-	-	-	-	21	0	0	80	25	31.25	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.544117647	0.772058824	2	0	0.01	0.99	0	0	0	0	3	8.31E-38	1	1	1	NA	NA	NA
1353824	PD9772b	1216260671	X	142330707	C	T	-	-	-	-	-	-	33	0	0	71	16	22.53521127	1	0	0	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.113504557	1.113504557	1	0	0	1	0	0	0	0	3	3.77E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216260758	X	143159633	G	T	-	-	-	-	-	-	35	0	0	64	11	17.1875	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	0.849264706	0.849264706	1	0	0.01125	0.98875	0	0	0	0	3	2.85E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216260850	X	143821464	G	T	-	-	-	-	-	-	27	0	0	48	11	22.91666667	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.132352941	1.132352941	1	0	0.0025	0.9975	0	0	0	0	3	9.31E-16	1	1	1	NA	NA	NA
1353824	PD9772b	1216260952	X	144627312	A	T	-	-	-	-	-	-	23	0	0	64	13	20.3125	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.003676471	1.003676471	1	0	0.0025	0.9975	0	0	0	0	3	1.26E-17	1	1	1	NA	NA	NA
1353824	PD9772b	1216261034	X	145422747	C	T	-	-	-	-	-	-	30	0	0	46	10	21.73913043	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.074168798	1.074168798	1	0	0.0025	0.9975	0	0	0	0	3	3.38E-14	1	1	1	NA	NA	NA
1353824	PD9772b	1216261053	X	145635736	C	T	-	-	-	-	-	-	33	0	0	74	18	24.32432432	0	0	NA	0	0	NA							4	2	2	1	NA	NA	NA	unphased	1.20190779	1.20190779	1	0	0	1	0	0	0	0	3	2.13E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216261221	X	147181340	C	T	-	-	-	-	-	-	26	0	0	100	34	34	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.02	1.01	2	0	0	1	0	0	0	0	3	2.45E-52	1	1	1	NA	NA	NA
1353824	PD9772b	1216261324	X	147881605	G	T	AFF2	CCDS14684.1	r.?	-	-	intronic	33	0	0	113	20	17.69911504	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.051535659	1.051535659	1	0	0	1	0	0	0	0	3	4.85E-25	1	1	1	NA	NA	NA
1353824	PD9772b	1216261434	X	148803573	C	T	HSFX2	CCDS48179.1	r.?	-	-	intronic	39	0	0	39	8	20.51282051	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.218702866	1.218702866	1	0	0.00625	0.99375	0	0	0	0	3	2.09E-11	1	1	1	NA	NA	NA
1353824	PD9772b	1216261446	X	148961834	C	T	-	-	-	-	-	-	32	0	0	100	12	12	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.712941176	0.712941176	1	0	0.0225	0.9775	0	0	0	0	3	1.71E-13	1	1	1	NA	NA	NA
1353824	PD9772b	1216261832	X	152013075	C	T	NSDHL	CCDS14717.1	r.?	-	-	intronic	29	0	0	25	4	16	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	0.950588235	0.950588235	1	0.00125	0.01875	0.98	0	0	0	0	3	7.27E-06	1	1	1	NA	NA	NA
1353824	PD9772b	1216261889	X	152640581	G	T	-	-	-	-	-	-	32	0	0	68	16	23.52941176	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.397923875	1.397923875	1	0	0	1	0	0	0	0	3	1.75E-22	1	1	1	NA	NA	NA
1353824	PD9772b	1216261910	X	152887990	A	T	-	-	-	-	-	-	40	0	0	45	18	40	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	2.376470588	1.188235294	2	0	0	1	0	0	0	0	3	5.76E-30	1	1	1	NA	NA	NA
1353824	PD9772b	1216262059	X	154442238	C	T	VBP1	CCDS14765.1	r.?	-	-	upstream	39	0	0	75	20	26.66666667	0	0	NA	0	0	NA							5	3	2	1	NA	NA	NA	unphased	1.584313725	0.792156863	2	0	0.00875	0.99125	0	0	0	0	3	5.89E-29	1	1	1	NA	NA	NA