Serialized Form
ivjJFrameContentPane
javax.swing.JPanel ivjJFrameContentPane
ivjJSplitPane1
javax.swing.JSplitPane ivjJSplitPane1
ivjJTree2
javax.swing.JTree ivjJTree2
fieldNames
java.util.Vector fieldNames
ivjJScrollPane1
javax.swing.JScrollPane ivjJScrollPane1
ivjAceModel
AceModel ivjAceModel
ivjJTabbedPane1
javax.swing.JTabbedPane ivjJTabbedPane1
ivjPage
javax.swing.JPanel ivjPage
controller
ClassViewController controller
first
WelcomePane first
lastPath
javax.swing.tree.TreePath lastPath
currentPath
javax.swing.tree.TreePath currentPath
title
java.lang.String title
DATABASE_NAME
java.lang.String DATABASE_NAME
host
java.lang.String host
port
int port
ivjJPanel1
javax.swing.JPanel ivjJPanel1
ivjJLabel1
javax.swing.JLabel ivjJLabel1
ivjJLabel2
javax.swing.JLabel ivjJLabel2
ivjJLabel3
javax.swing.JLabel ivjJLabel3
name
java.lang.String name
count
int count
ivjIndexSelector1
IndexSelector ivjIndexSelector1
ivjJPanel2
javax.swing.JPanel ivjJPanel2
ivjJPanel2GridLayout
java.awt.GridLayout ivjJPanel2GridLayout
model
ClassDisplayerModel model
buttonAllEnable
boolean buttonAllEnable
ivjJLabelAll
javax.swing.JLabel ivjJLabelAll
ivjJToolBar1
javax.swing.JToolBar ivjJToolBar1
ivjJPanel3
javax.swing.JPanel ivjJPanel3
ivjJPanel3GridLayout
java.awt.GridLayout ivjJPanel3GridLayout
ivjJPanel1
javax.swing.JPanel ivjJPanel1
ivjJPanel1GridLayout
java.awt.GridLayout ivjJPanel1GridLayout
model
ClassListModel model
ivjAllButton
javax.swing.JButton ivjAllButton
ivjLetterBox
javax.swing.JComboBox ivjLetterBox
ivjLetterLabel
javax.swing.JLabel ivjLetterLabel
ivjNextButton
javax.swing.JButton ivjNextButton
ivjPageBox
javax.swing.JComboBox ivjPageBox
ivjPageLabel
javax.swing.JLabel ivjPageLabel
ivjPreviouseButton
javax.swing.JButton ivjPreviouseButton
className
java.lang.String className
mediator
ClassListMediator mediator
ivjModel
ClassListModel ivjModel
ivjJPanel2
javax.swing.JPanel ivjJPanel2
totalPage
int totalPage
currentPanel
javax.swing.JPanel currentPanel
ivjJPanel4
javax.swing.JPanel ivjJPanel4
aceobject
java.lang.String aceobject
host
java.lang.String host
port
int port
cls
java.lang.String cls
obj
java.lang.String obj
jButton1
javax.swing.JButton jButton1
jLabel1
javax.swing.JLabel jLabel1
index
javax.swing.JLabel[] index
ivjIndexSelectorGridLayout
java.awt.GridLayout ivjIndexSelectorGridLayout
localObj
jade.db.AceObject localObj
ivjJButton1
javax.swing.JButton ivjJButton1
ivjJLabel1
javax.swing.JLabel ivjJLabel1
ivjJProgressBar1
javax.swing.JProgressBar ivjJProgressBar1
ivjJButton1
javax.swing.JButton ivjJButton1
ivjJLabel1
javax.swing.JLabel ivjJLabel1
ivjJLabel2
javax.swing.JLabel ivjJLabel2
ivjJPanel1
javax.swing.JPanel ivjJPanel1
ivjJPanel2
javax.swing.JPanel ivjJPanel2
ivjJTextField1
javax.swing.JTextField ivjJTextField1
ivjSearchPanelGridLayout
java.awt.GridLayout ivjSearchPanelGridLayout
dbFrame
AceDBFrame dbFrame
ivjJComboBox1
javax.swing.JComboBox ivjJComboBox1
frame
javax.swing.JFrame frame
jComboBox1
javax.swing.JComboBox jComboBox1
jTextField1
javax.swing.JTextField jTextField1
jLabel1
javax.swing.JLabel jLabel1
jLabel2
javax.swing.JLabel jLabel2
jButton1
javax.swing.JButton jButton1
jButton2
javax.swing.JButton jButton2
box2
javax.swing.JComboBox box2
dbFrame
AceDBFrame dbFrame
viewProp
java.util.Properties viewProp
frame
javax.swing.JFrame frame
details
javax.swing.JTextArea details
taPanel
javax.swing.JPanel taPanel
showDetails
boolean showDetails
propName
java.lang.String propName
ivjJLabel1
javax.swing.JLabel ivjJLabel1
fieldMessage
java.lang.String fieldMessage
Package jadex.swing.classView |
marker
LocusPanel marker
markerPanel
javax.swing.JPanel markerPanel
locator
MapCartoon locator
locatorPanel
javax.swing.JPanel locatorPanel
markerAndLocatorPanel
javax.swing.JPanel markerAndLocatorPanel
rangeControl
RangeControlPanel rangeControl
controlPanel
javax.swing.JPanel controlPanel
leftScale
MapScale1 leftScale
rightScale
MapScale1 rightScale
scalePane1
javax.swing.JPanel scalePane1
scalePane2
javax.swing.JPanel scalePane2
container
javax.swing.JPanel container
menubar
MapViewContainerMenuBar menubar
control
MapControl control
container
MapViewContainer container
viewMenu
javax.swing.JMenu viewMenu
items
javax.swing.JMenu items
itemMap
java.util.Map itemMap
helpMenu
javax.swing.JMenu helpMenu
fileMenu
javax.swing.JMenu fileMenu
open
javax.swing.JMenuItem open
dFont
java.awt.Font dFont
jPanel3
javax.swing.JPanel jPanel3
jLabel1
javax.swing.JLabel jLabel1
jRadioButton1
javax.swing.JRadioButton jRadioButton1
jRadioButton2
javax.swing.JRadioButton jRadioButton2
jPanel5
javax.swing.JPanel jPanel5
jLabel2
javax.swing.JLabel jLabel2
jCheckBox1
javax.swing.JCheckBox jCheckBox1
jCheckBox2
javax.swing.JCheckBox jCheckBox2
jCheckBox3
javax.swing.JCheckBox jCheckBox3
jCheckBox4
javax.swing.JCheckBox jCheckBox4
jCheckBox5
javax.swing.JCheckBox jCheckBox5
jPanel6
javax.swing.JPanel jPanel6
jLabel3
javax.swing.JLabel jLabel3
jComboBox1
javax.swing.JComboBox jComboBox1
jLabel4
javax.swing.JLabel jLabel4
jComboBox2
javax.swing.JComboBox jComboBox2
jPanel7
javax.swing.JPanel jPanel7
jButton1
javax.swing.JButton jButton1
jButton2
javax.swing.JButton jButton2
jButton3
javax.swing.JButton jButton3
frame
java.awt.Container frame
deFont
java.awt.Font deFont
control
DisplayControl control
display
MapPointDisplay display
more
javax.swing.JMenuItem more
less
javax.swing.JMenuItem less
reset
javax.swing.JMenuItem reset
columnLayout
javax.swing.JRadioButton columnLayout
smartLayout
javax.swing.JRadioButton smartLayout
count
int count
cls
java.lang.String cls
isBottom
boolean isBottom
panels
java.util.Vector panels
intervals
java.util.Vector intervals
extend
float extend
range
MapRange range
popup
javax.swing.JPopupMenu popup
control
MapControl control
intervals
java.util.Vector intervals
range
MapRange range
extend
float extend
offset
float offset
start
float start
end
float end
w
float w
h
float h
name
java.lang.String name
range
MapRange range
background
java.awt.Color background
forIn
java.awt.Color forIn
forOut
java.awt.Color forOut
foreground
java.awt.Color foreground
fontM
java.awt.FontMetrics fontM
lineM
java.awt.font.LineMetrics lineM
deFont
java.awt.Font deFont
interval
jade.db.AceObject interval
control
MapControl control
pop
javax.swing.JPopupMenu pop
url
java.lang.String url
size
java.awt.Dimension size
control
DisplayControl control
mouseIn
boolean mouseIn
range
MapRange range
map
MapRange map
control
LocusControl control
loci
MapPoint[] loci
sTotal
MapPoint[] sTotal
lUI
LocusUI[] lUI
points
java.util.Vector points
REL
float REL
yPadding
float yPadding
xPadding
float xPadding
rightP
float rightP
offset
float offset
rel
float rel
zoom
java.awt.geom.Rectangle2D.Float zoom
inX
float inX
inY
float inY
outX
float outX
outY
float outY
mag
Magnifier mag
cShown
boolean cShown
mouseInName
java.lang.String mouseInName
pop2
javax.swing.JPopupMenu pop2
topKnob
Knob topKnob
bottomKnob
Knob bottomKnob
pColor
java.awt.Color pColor
vColor
java.awt.Color vColor
hColor
java.awt.Color hColor
cColor
java.awt.Color cColor
bColor
java.awt.Color bColor
nColor
java.awt.Color nColor
highLightColor
java.awt.Color highLightColor
layout
LocusLayout layout
columnLayout
LocusLayout columnLayout
smartLayout
LocusLayout smartLayout
mini
MiniMapCartoon mini
loci
java.util.Vector loci
DIFF
float DIFF
REL
float REL
range
MapRange range
extend
float extend
offset
float offset
locus
jade.db.AceObject locus
accessor
jade.db.AceAccessor accessor
isClone
boolean isClone
position
float position
error
float error
name
java.lang.String name
showName
boolean showName
background
java.awt.Color background
foreIn
java.awt.Color foreIn
foreOut
java.awt.Color foreOut
foreground
java.awt.Color foreground
debug
boolean debug
url
java.lang.String url
WIDTH
float WIDTH
inX
float inX
inY
float inY
outX
float outX
outY
float outY
relInX
float relInX
relInY
float relInY
relOutX
float relOutX
relOutY
float relOutY
alpha
float alpha
composite
java.awt.AlphaComposite composite
rule
int rule
start
boolean start
dragging
boolean dragging
inScale
boolean inScale
drawing
java.awt.Shape drawing
cartoon
java.awt.Shape cartoon
top
boolean top
bottom
boolean bottom
popup
boolean popup
popY
int popY
w
float w
h
float h
mainLoci
jade.db.AceObject[] mainLoci
paddingY
float paddingY
TOTAL_LENGTH_LONG
long TOTAL_LENGTH_LONG
TOTAL_LENGTH_FLOAT
float TOTAL_LENGTH_FLOAT
control
MapControl control
debug
boolean debug
range
MapRange range
- Holds value of property range.
map
MapRange map
frame
javax.swing.JInternalFrame frame
f
javax.swing.JFrame f
dFont
java.awt.Font dFont
view
MapView view
accessor
jade.db.AceAccessor accessor
connectP
jadeSocket.ConnectPanel connectP
mk
javax.swing.JCheckBox mk
locator
javax.swing.JCheckBox locator
loci
javax.swing.JCheckBox loci
it
javax.swing.JCheckBox it
scaleLeft
javax.swing.JCheckBox scaleLeft
scaleRight
javax.swing.JCheckBox scaleRight
viewMenu
javax.swing.JMenu viewMenu
helpMenu
javax.swing.JMenu helpMenu
file
javax.swing.JMenu file
isApplet
boolean isApplet
connectProp
java.beans.PropertyChangeListener connectProp
range
MapRange range
- Holds value of property range.
range
MapRange range
extend
float extend
end
float end
TOTAL_TICK
int TOTAL_TICK
range
MapRange range
map
MapRange map
marker
MapPoint[] marker
rel
float rel
control
MapControl control
jPanel1
javax.swing.JPanel jPanel1
jLabel1
javax.swing.JLabel jLabel1
jLabel2
javax.swing.JLabel jLabel2
jTextField1
javax.swing.JTextField jTextField1
jLabel3
javax.swing.JLabel jLabel3
jTextField2
javax.swing.JTextField jTextField2
jButton4
javax.swing.JButton jButton4
jPanel2
javax.swing.JPanel jPanel2
jButton3
javax.swing.JButton jButton3
zoomButtons
ZoomButtonControl zoomButtons
isTop
boolean isTop
control
MapControl control
map
MapRange map
extend
float extend
step
float step
panel
MapZoom panel
f
javax.swing.JFrame f
deFont
java.awt.Font deFont
STEP
int STEP
count
int count
up
java.awt.event.ActionListener up
down
java.awt.event.ActionListener down
reset
java.awt.event.ActionListener reset
Package jadex.swing.sequence |
control
CloneControl control
clones
java.util.List clones
assClones
java.util.List assClones
names
LocusUI[] names
range
MapRange range
cShown
boolean cShown
mouseInName
java.lang.String mouseInName
xPadding
float xPadding
yPadding
float yPadding
CLONE_WIDTH
float CLONE_WIDTH
TOTAL_COLUMN
int TOTAL_COLUMN
rel
float rel
offset
float offset
verticalP
float verticalP
zoom
java.awt.geom.Rectangle2D.Float zoom
upKnob
Knob upKnob
downKnob
Knob downKnob
pop
DisplayPopup pop
layout
LocusLayout layout
columnLayout
LocusLayout columnLayout
smartLayout
LocusLayout smartLayout
mag
Magnifier mag
name
java.lang.String name
clone
Clone clone
MOUSE_IN_COLOR
java.awt.Color MOUSE_IN_COLOR
MOUSE_OUT_COLOR
java.awt.Color MOUSE_OUT_COLOR
foreColor
java.awt.Color foreColor
background
java.awt.Color background
foreground
java.awt.Color foreground
exons
java.util.List exons
xPadding
float xPadding
yPadding
float yPadding
totalBp
long totalBp
range
MapRange range
extend
long extend
start
long start
TOTAL_TICK
int TOTAL_TICK
labelFont
java.awt.Font labelFont
xPadding
float xPadding
range
MapRange range
fullRange
MapRange fullRange
fullColor
java.awt.Color fullColor
displayColor
java.awt.Color displayColor
xPadding
float xPadding
yPadding
float yPadding
propertyChangeSupport
java.beans.PropertyChangeSupport propertyChangeSupport
jPanel1
javax.swing.JPanel jPanel1
jLabel4
javax.swing.JLabel jLabel4
jLabel5
javax.swing.JLabel jLabel5
jTextField3
javax.swing.JTextField jTextField3
jLabel6
javax.swing.JLabel jLabel6
jTextField4
javax.swing.JTextField jTextField4
jButton1
javax.swing.JButton jButton1
jButton2
javax.swing.JButton jButton2
renderer
SequenceRenderer renderer
geneRenderer
GeneRenderer geneRenderer
model
SequenceModel model
selectionModel
SequenceSelectionModel selectionModel
layoutModel
SequenceLayoutModel layoutModel
popup
javax.swing.JPopupMenu popup
table
javax.swing.JTable table
jLabel1
javax.swing.JLabel jLabel1
jButton1
javax.swing.JButton jButton1
selectionForeground
java.awt.Color selectionForeground
selectionBackground
java.awt.Color selectionBackground
background
java.awt.Color background
foreground
java.awt.Color foreground
lineColor
java.awt.Color lineColor
isPlus
boolean isPlus
xPadding
float xPadding
yPadding
float yPadding
nameLabel
javax.swing.JLabel nameLabel
sequence
org.jdom.Element sequence
isSelected
boolean isSelected
isMultiSelected
boolean isMultiSelected
list
java.util.List list
tree
javax.swing.JTree tree
treeModel
javax.swing.tree.TreeModel treeModel
contentPane
javax.swing.JTabbedPane contentPane
sp
javax.swing.JScrollPane sp
selectionListener
javax.swing.event.TreeSelectionListener selectionListener
rendererPane
javax.swing.CellRendererPane rendererPane
display
SequenceDisplay display
mouseHandler
javax.swing.event.MouseInputListener mouseHandler
selectionHandler
jadex.swing.sequence.SequenceUI.SelectionEventHandler selectionHandler
propertyHandler
jadex.swing.sequence.SequenceUI.PropertyChangeHandler propertyHandler
layoutModel
SequenceLayoutModel layoutModel
currentLayer
int currentLayer
doSelection
boolean doSelection
paintBounds
java.awt.Rectangle paintBounds
connColor
java.awt.Color connColor
saxdriver
java.lang.String saxdriver
viewFactory
SequenceViewFactory viewFactory
zoom
java.awt.geom.Rectangle2D.Float zoom
pos
float pos
jPanel1
javax.swing.JPanel jPanel1
jButton1
javax.swing.JButton jButton1
jButton2
javax.swing.JButton jButton2