Validation report with specification /nfs/users/nfs_s/ss34/new_gff_format.lua
Features
pseudogene
…only contains allowed attributes
successes 175
failures 0
runtime errors 0
…contains a pseudogenic_transcript
successes 174
failures 1
runtime errors 0
ID:
LbrM.22.1205 , file
Lbraziliensis.noseq.gff3 ,
line
23391
/nfs/users/nfs_s/ss34/new_gff_format.lua:61: expecting true, not false
…has only allowed child types
successes 174
failures 0
runtime errors 0
…appears as a root node
successes 175
failures 0
runtime errors 0
…contains all child features within its coordinates
successes 175
failures 0
runtime errors 0
tRNA
…only contains allowed attributes
successes 66
failures 0
runtime errors 0
…should not have children
successes 66
failures 0
runtime errors 0
…appears as part of a gene
successes 66
failures 0
runtime errors 0
CDS
…should not have children
successes 8246
failures 0
runtime errors 0
…appears as child of an mRNA
successes 8243
failures 3
runtime errors 0
ID:
LbrM.22.1205:exon:3 , file
Lbraziliensis.noseq.gff3 ,
line
23397
/nfs/users/nfs_s/ss34/new_gff_format.lua:274: expecting true, not false
ID:
LbrM.22.1205:exon:2 , file
Lbraziliensis.noseq.gff3 ,
line
23395
/nfs/users/nfs_s/ss34/new_gff_format.lua:274: expecting true, not false
ID:
LbrM.22.1205:exon:1 , file
Lbraziliensis.noseq.gff3 ,
line
23389
/nfs/users/nfs_s/ss34/new_gff_format.lua:274: expecting true, not false
…only contains allowed attributes
successes 8245
failures 1
runtime errors 0
ID:
LbrM.10.1540.1:exon:1 , file
Lbraziliensis.noseq.gff3 ,
line
246
/nfs/users/nfs_s/ss34/new_gff_format.lua:281: [ID, Name, Parent, comment, Note, End_range, Start_range, Dbxref, controlled_curation, previous_systematic_id] does not contain value literature
rRNA
…only contains allowed attributes
successes 7
failures 0
runtime errors 0
…should not have children
successes 7
failures 0
runtime errors 0
…appears as part of a gene
successes 7
failures 0
runtime errors 0
snRNA
…only contains allowed attributes
successes 7
failures 0
runtime errors 0
…should not have children
successes 7
failures 0
runtime errors 0
…appears as part of a gene
successes 7
failures 0
runtime errors 0
gap
…appears as a root node
successes 816
failures 0
runtime errors 0
…should not have children
successes 816
failures 0
runtime errors 0
…only contains allowed attributes
successes 816
failures 0
runtime errors 0
repeat_unit
…appears as a root node
successes 2
failures 0
runtime errors 0
…should not have children
successes 2
failures 0
runtime errors 0
ncRNA
…only contains allowed attributes
successes 26
failures 0
runtime errors 0
…should not have children
successes 26
failures 0
runtime errors 0
…appears as part of a gene
successes 26
failures 0
runtime errors 0
snoRNA
…only contains allowed attributes
successes 34
failures 0
runtime errors 0
…should not have children
successes 34
failures 0
runtime errors 0
…appears as part of a gene
successes 34
failures 0
runtime errors 0
pseudogenic_exon
…appears as part of a pseudogenic_transcript
successes 312
failures 0
runtime errors 0
…should not have children
successes 312
failures 0
runtime errors 0
…only contains allowed attributes
successes 312
failures 0
runtime errors 0
pseudogenic_transcript
…only contains allowed attributes
successes 174
failures 0
runtime errors 0
…appears as part of a pseudogene
successes 174
failures 0
runtime errors 0
…has only allowed child types
successes 174
failures 0
runtime errors 0
…contains at least one pseudogenic_exon
successes 174
failures 0
runtime errors 0
five_prime_UTR
…only contains allowed attributes
successes 3
failures 0
runtime errors 0
…should not have children
successes 3
failures 0
runtime errors 0
…appears as part of a gene
successes 3
failures 0
runtime errors 0
gene
…only contains allowed attributes
successes 8321
failures 0
runtime errors 0
…has consistent strands across all children
successes 8321
failures 0
runtime errors 0
…has only allowed child types
successes 8321
failures 0
runtime errors 0
…appears as a root node
successes 8321
failures 0
runtime errors 0
…contains all child features within its coordinates
successes 8321
failures 0
runtime errors 0
mRNA
…agrees exactly with CDS/UTR coordinates of its children
successes 8139
failures 42
runtime errors 0
ID:
LbrM.32.2930:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
41545
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.26.0310:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
27840
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.28.2260:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
32554
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.28.2600:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
32764
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.35.5510:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
51449
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.16.0550:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
13487
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.23.1550:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
24643
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.30.1491.1 , file
Lbraziliensis.noseq.gff3 ,
line
35917
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.08.0840:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
6666
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.29.0890:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
33720
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.35.7150:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
52485
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.10.0730:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
8252
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.29.0620:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
33558
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.21.1530:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
22273
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.13.0690:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
10531
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.24.2280:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
26333
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.09.0331.1 , file
Lbraziliensis.noseq.gff3 ,
line
6960
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.31.1150:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
38088
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.14.0960:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
11685
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.34.2650:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
46301
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.35.5500:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
51435
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.34.3650:pseudogenic_transcript , file
Lbraziliensis.noseq.gff3 ,
line
46926
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.11.0450:pseudogenic_transcript , file
Lbraziliensis.noseq.gff3 ,
line
9046
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.15.1500:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
13099
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.26.0330:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
27852
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.35.2930:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
49833
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.29.1960:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
34392
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.21.0780:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
21780
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.27.2130:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
30685
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.21.0010:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
21295
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.22.0190:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
22741
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.19.1541.1 , file
Lbraziliensis.noseq.gff3 ,
line
17289
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.32.1580:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
40702
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.21.0730:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
21748
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.35.5520:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
51455
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.16.0190:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
13263
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.20.1190:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
18264
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.20.1860:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
18674
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.27.2050:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
30635
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.34.0020:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
44652
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.32.2380:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
41195
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
ID:
LbrM.25.1030:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
27064
/nfs/users/nfs_s/ss34/new_gff_format.lua:226: false is not truthy
…only contains allowed attributes
successes 8181
failures 0
runtime errors 0
…has a coding sequence >= 3bp
successes 8181
failures 0
runtime errors 0
…has at least one CDS child
successes 8181
failures 0
runtime errors 0
…has only allowed child types
successes 8181
failures 0
runtime errors 0
…has non-partial CDS ending on a stop codon
successes 8045
failures 129
runtime errors 0
ID:
LbrM.24.0450:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
25183
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.32.2930:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
41545
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: Y does not match pattern [*+#]
ID:
LbrM.17.0820:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
14776
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
ID:
LbrM.31.3410:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
39586
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
ID:
LbrM.17.0490:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
14567
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: Q does not match pattern [*+#]
ID:
LbrM.11.0930:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
9359
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
ID:
LbrM.18.1720:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
16333
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: N does not match pattern [*+#]
ID:
LbrM.19.1530:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
17275
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: H does not match pattern [*+#]
ID:
LbrM.35.6480:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
52053
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
ID:
LbrM.08.0230:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
6266
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: C does not match pattern [*+#]
ID:
LbrM.30.3730:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
37323
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
ID:
LbrM.26.0540:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
27980
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
ID:
LbrM.26.2650:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
29329
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
ID:
LbrM.02.0690:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
983
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: Q does not match pattern [*+#]
ID:
LbrM.25.0340:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
26639
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
ID:
LbrM.26.1250:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
28417
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.22.0580:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
22991
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: N does not match pattern [*+#]
ID:
LbrM.33.3050:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
44303
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.34.0070:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
44689
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
ID:
LbrM.12.0420:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
9774
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
ID:
LbrM.19.1250:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
17099
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.03.0500:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
2629
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: C does not match pattern [*+#]
ID:
LbrM.16.1520:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
14125
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
ID:
LbrM.33.3350:pseudogenic_transcript , file
Lbraziliensis.noseq.gff3 ,
line
44495
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.02.0750:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
1020
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
ID:
LbrM.18.1000:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
15886
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.17.0470:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
14553
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
ID:
LbrM.35.1410:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
48868
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
ID:
LbrM.10.0390:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
8030
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.31.2860:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
39236
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.27.0620:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
29733
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: C does not match pattern [*+#]
ID:
LbrM.27.2810:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
31121
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: M does not match pattern [*+#]
ID:
LbrM.31.2230:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
38829
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
ID:
LbrM.22.1600:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
491
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.02.0290:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
2061
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
ID:
LbrM.04.0210:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
3045
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
ID:
LbrM.28.1200:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
31892
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
ID:
LbrM.26.0370:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
27878
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
ID:
LbrM.33.3410:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
44533
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
ID:
LbrM.08.0980:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
1304
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.04.0680:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
3362
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.19.1940:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
404
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
ID:
LbrM.34.3520:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
46846
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
ID:
LbrM.35.0880:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
48542
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.02.0170:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
1976
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.22.0830:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
23147
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
ID:
LbrM.24.0560:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
25258
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
ID:
LbrM.22.0440:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
22905
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
ID:
LbrM.24.0470:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
25197
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.32.3410:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
41842
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
ID:
LbrM.09.0410:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
7008
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
ID:
LbrM.29.2260:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
34583
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: M does not match pattern [*+#]
ID:
LbrM.34.2180:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
45990
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
ID:
LbrM.35.4630:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
50905
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.15.0500:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
12464
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
ID:
LbrM.34.5350:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
47989
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
ID:
LbrM.35.5740:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
51591
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
ID:
LbrM.07.0920.A:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
5912
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
ID:
LbrM.11.0620:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
9156
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
ID:
LbrM.31.1270:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
38169
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
ID:
LbrM.30.0990:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
35602
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: F does not match pattern [*+#]
ID:
LbrM.31.2630:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
39092
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.32.1900:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
40898
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.28.1580:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
32130
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
ID:
LbrM.29.0010:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
33182
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
ID:
LbrM.31.2070:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
38705
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
ID:
LbrM.15.0460:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
12436
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: M does not match pattern [*+#]
ID:
LbrM.06.1300:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
1280
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
ID:
LbrM.19.0680:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
16743
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
ID:
LbrM.28.1870:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
32308
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
ID:
LbrM.08.0380:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
6362
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
ID:
LbrM.11.1170:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
9512
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
ID:
LbrM.30.2500:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
36562
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
ID:
LbrM.19.0880:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
16867
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: W does not match pattern [*+#]
ID:
LbrM.21.1980:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
22561
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
ID:
LbrM.17.0990:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
14878
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: Q does not match pattern [*+#]
ID:
LbrM.25.1010:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
27052
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
ID:
LbrM.32.1230:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
40488
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.07.0520:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
5658
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
ID:
LbrM.24.1160:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
25631
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.31.3640:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
39728
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
ID:
LbrM.10.1710.1 , file
Lbraziliensis.noseq.gff3 ,
line
1201
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
ID:
LbrM.28.2980:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
33014
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
ID:
LbrM.02.0500:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
2200
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
ID:
LbrM.05.0950:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
4329
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: N does not match pattern [*+#]
ID:
LbrM.25.2510:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
821
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: F does not match pattern [*+#]
ID:
LbrM.34.0520:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
44965
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
ID:
LbrM.35.5500.A:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
51443
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: Q does not match pattern [*+#]
ID:
LbrM.34.3500:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
46832
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
ID:
LbrM.31.3670:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
1103
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.25.1380:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
27280
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
ID:
LbrM.35.3570:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
50219
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
ID:
LbrM.18.1780:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
374
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
ID:
LbrM.10.1050:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
8452
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
ID:
LbrM.20.2100:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
18818
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.12.0730:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
9970
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
ID:
LbrM.16.1740:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
337
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
ID:
LbrM.26.1860:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
28847
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.02.0760:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
1026
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
ID:
LbrM.18.1110:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
15956
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
ID:
LbrM.27.0260:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
29506
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
ID:
LbrM.27.2150:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
30701
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
ID:
LbrM.35.6940:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
52357
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
ID:
LbrM.08.0550:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
6472
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: N does not match pattern [*+#]
ID:
LbrM.34.2060:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
45916
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
ID:
LbrM.03.0010:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
2322
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
ID:
LbrM.21.0970:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
21903
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: W does not match pattern [*+#]
ID:
LbrM.10.1670.1 , file
Lbraziliensis.noseq.gff3 ,
line
1115
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
ID:
LbrM.08.1070:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
1358
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: N does not match pattern [*+#]
ID:
LbrM.17.0110:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
14323
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
ID:
LbrM.26.1690:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
28695
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
ID:
LbrM.33.2770:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
44128
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
ID:
LbrM.10.0550:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
8134
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
ID:
LbrM.01.0550:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
1714
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: M does not match pattern [*+#]
ID:
LbrM.04.0790:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
3433
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
ID:
LbrM.14.1320:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
11910
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.31.1130:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
38074
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
ID:
LbrM.04.0260:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
3083
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
ID:
LbrM.11.0260:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
8930
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.19.1160:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
17041
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: Q does not match pattern [*+#]
ID:
LbrM.31.2500:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
39010
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: W does not match pattern [*+#]
ID:
LbrM.10.1560.1 , file
Lbraziliensis.noseq.gff3 ,
line
257
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.27.0890:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
29907
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.34.3950:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
47112
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
ID:
LbrM.01.0260:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
1528
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
ID:
LbrM.16.0460:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
13433
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
ID:
LbrM.16.0780:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
13639
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: H does not match pattern [*+#]
ID:
LbrM.17.0230:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
14401
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
ID:
LbrM.05.0390:mRNA , file
Lbraziliensis.noseq.gff3 ,
line
3962
/nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
…has non-selenocysteine CDS with no internal stop codons
successes 8180
failures 0
runtime errors 0
…consists of less than 50% Ns
successes 8181
failures 0
runtime errors 0
…appears as part of a gene
successes 8181
failures 0
runtime errors 0
polypeptide
…agrees exactly with CDS of >=1 overlapping coding transcripts
successes 8307
failures 47
runtime errors 0
ID:
LbrM.09.1480:pep , file
Lbraziliensis.noseq.gff3 ,
line
7705
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.21.1530:pep , file
Lbraziliensis.noseq.gff3 ,
line
22276
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.27.1350:pseudogenic_transcript:pep , file
Lbraziliensis.noseq.gff3 ,
line
30190
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.08.0840:pep , file
Lbraziliensis.noseq.gff3 ,
line
6669
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.13.0690:pep , file
Lbraziliensis.noseq.gff3 ,
line
10534
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.34.0020:pep , file
Lbraziliensis.noseq.gff3 ,
line
44655
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.30.1790:pep , file
Lbraziliensis.noseq.gff3 ,
line
36112
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.21.0780:pep , file
Lbraziliensis.noseq.gff3 ,
line
21783
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.35.2930:pep , file
Lbraziliensis.noseq.gff3 ,
line
49836
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.20.1190:pep , file
Lbraziliensis.noseq.gff3 ,
line
18267
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.21.0010:pep , file
Lbraziliensis.noseq.gff3 ,
line
21298
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.09.0331.1:pep , file
Lbraziliensis.noseq.gff3 ,
line
6963
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.34.3650:pseudogenic_transcript:pep , file
Lbraziliensis.noseq.gff3 ,
line
46929
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.29.0890:pep , file
Lbraziliensis.noseq.gff3 ,
line
33723
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.32.2380:pep , file
Lbraziliensis.noseq.gff3 ,
line
41198
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.15.1500:pep , file
Lbraziliensis.noseq.gff3 ,
line
13102
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.26.0330:pep , file
Lbraziliensis.noseq.gff3 ,
line
27855
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.21.0730:pep , file
Lbraziliensis.noseq.gff3 ,
line
21751
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.35.7150:pep , file
Lbraziliensis.noseq.gff3 ,
line
52488
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.34.2650:pep , file
Lbraziliensis.noseq.gff3 ,
line
46304
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.28.2600:pep , file
Lbraziliensis.noseq.gff3 ,
line
32767
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.27.2050:pep , file
Lbraziliensis.noseq.gff3 ,
line
30638
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.11.0450:pseudogenic_transcript:pep , file
Lbraziliensis.noseq.gff3 ,
line
9049
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.20.1860:pep , file
Lbraziliensis.noseq.gff3 ,
line
18677
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.27.2130:pep , file
Lbraziliensis.noseq.gff3 ,
line
30688
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.32.1580:pep , file
Lbraziliensis.noseq.gff3 ,
line
40705
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.34.3890:pseudogenic_transcript:pep , file
Lbraziliensis.noseq.gff3 ,
line
47077
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.13.0200:pep , file
Lbraziliensis.noseq.gff3 ,
line
10229
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.16.0190:pep , file
Lbraziliensis.noseq.gff3 ,
line
13266
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.28.2260:pep , file
Lbraziliensis.noseq.gff3 ,
line
32557
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.35.5510:pep , file
Lbraziliensis.noseq.gff3 ,
line
51452
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.29.0620:pep , file
Lbraziliensis.noseq.gff3 ,
line
33561
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.07.0031.1:pep , file
Lbraziliensis.noseq.gff3 ,
line
5343
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.22.0190:pep , file
Lbraziliensis.noseq.gff3 ,
line
22744
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.34.3540:pep , file
Lbraziliensis.noseq.gff3 ,
line
46863
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.35.5520:pep , file
Lbraziliensis.noseq.gff3 ,
line
51458
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.35.5500:pep , file
Lbraziliensis.noseq.gff3 ,
line
51438
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.24.2280:pep , file
Lbraziliensis.noseq.gff3 ,
line
26336
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.25.1030:pep , file
Lbraziliensis.noseq.gff3 ,
line
27067
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.15.1180:pseudogenic_transcript:pep , file
Lbraziliensis.noseq.gff3 ,
line
12894
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.10.0730:pep , file
Lbraziliensis.noseq.gff3 ,
line
8255
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.29.1960:pep , file
Lbraziliensis.noseq.gff3 ,
line
34395
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.26.0310:pep , file
Lbraziliensis.noseq.gff3 ,
line
27843
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.16.0550:pep , file
Lbraziliensis.noseq.gff3 ,
line
13490
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.27.1890:pep , file
Lbraziliensis.noseq.gff3 ,
line
30525
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.14.0960:pep , file
Lbraziliensis.noseq.gff3 ,
line
11688
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
ID:
LbrM.18.1070:pep , file
Lbraziliensis.noseq.gff3 ,
line
15931
/nfs/users/nfs_s/ss34/new_gff_format.lua:387: 0 is smaller than 0
…only contains allowed attributes
successes 8356
failures 0
runtime errors 0
…has a required product attribute
successes 8350
failures 6
runtime errors 0
ID:
LbrM.23.0621.1:pep , file
Lbraziliensis.noseq.gff3 ,
line
24025
/nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
ID:
LbrM.07.0031.1:pep , file
Lbraziliensis.noseq.gff3 ,
line
5343
/nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
ID:
LbrM.34.4191.1:pep , file
Lbraziliensis.noseq.gff3 ,
line
47271
/nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
ID:
LbrM.23.0770:pep , file
Lbraziliensis.noseq.gff3 ,
line
24162
/nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
ID:
LbrM.24.1400:pep , file
Lbraziliensis.noseq.gff3 ,
line
25783
/nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
ID:
LbrM.27.2840:pep , file
Lbraziliensis.noseq.gff3 ,
line
31146
/nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
…overlaps the transcript it derives_from
successes 8354
failures 2
runtime errors 0
ID:
LbrM.22.1205:pep , file
Lbraziliensis.noseq.gff3 ,
line
23393
/nfs/users/nfs_s/ss34/new_gff_format.lua:350: 0 is smaller than 0
ID:
LbrM.20.2800:pep , file
Lbraziliensis.noseq.gff3 ,
line
19187
/nfs/users/nfs_s/ss34/new_gff_format.lua:350: 0 is smaller than 0
…must be derived_from a unique mRNA
successes 8355
failures 0
runtime errors 1
ID:
LbrM.22.1205:pep , file
Lbraziliensis.noseq.gff3 ,
line
23393
/nfs/users/nfs_s/ss34/new_gff_format.lua:297: should not be nil but is nil
/nfs/users/nfs_s/ss34/new_gff_format.lua:299: table index is nil
…appears as a root node
successes 8356
failures 0
runtime errors 0
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