Validation report with specification /nfs/users/nfs_s/ss34/new_gff_format.lua
-
- pseudogene
-
…only contains allowed attributes
successes 52
failures 0
runtime errors 0
-
…contains a pseudogenic_transcript
successes 52
failures 0
runtime errors 0
-
…has only allowed child types
successes 52
failures 0
runtime errors 0
-
…appears as a root node
successes 52
failures 0
runtime errors 0
-
…contains all child features within its coordinates
successes 52
failures 0
runtime errors 0
- CDS
-
…should not have children
successes 7995
failures 0
runtime errors 0
-
…appears as child of an mRNA
successes 7995
failures 0
runtime errors 0
-
…only contains allowed attributes
successes 7995
failures 0
runtime errors 0
- gap
-
…appears as a root node
successes 2121
failures 0
runtime errors 0
-
…should not have children
successes 2121
failures 0
runtime errors 0
-
…only contains allowed attributes
successes 2121
failures 0
runtime errors 0
- ncRNA
-
…only contains allowed attributes
successes 37
failures 0
runtime errors 0
-
…should not have children
successes 37
failures 0
runtime errors 0
-
…appears as part of a gene
successes 37
failures 0
runtime errors 0
- tRNA
-
…only contains allowed attributes
successes 64
failures 0
runtime errors 0
-
…should not have children
successes 64
failures 0
runtime errors 0
-
…appears as part of a gene
successes 64
failures 0
runtime errors 0
- rRNA
-
…only contains allowed attributes
successes 11
failures 0
runtime errors 0
-
…should not have children
successes 11
failures 0
runtime errors 0
-
…appears as part of a gene
successes 11
failures 0
runtime errors 0
- pseudogenic_transcript
-
…only contains allowed attributes
successes 52
failures 0
runtime errors 0
-
…appears as part of a pseudogene
successes 52
failures 0
runtime errors 0
-
…has only allowed child types
successes 52
failures 0
runtime errors 0
-
…contains at least one pseudogenic_exon
successes 52
failures 0
runtime errors 0
- pseudogenic_exon
-
…appears as part of a pseudogenic_transcript
successes 53
failures 0
runtime errors 0
-
…should not have children
successes 53
failures 0
runtime errors 0
-
…only contains allowed attributes
successes 53
failures 0
runtime errors 0
- gene
-
…only contains allowed attributes
successes 8086
failures 0
runtime errors 0
-
…has consistent strands across all children
successes 8086
failures 0
runtime errors 0
-
…has only allowed child types
successes 8086
failures 0
runtime errors 0
-
…appears as a root node
successes 8086
failures 0
runtime errors 0
-
…contains all child features within its coordinates
successes 8086
failures 0
runtime errors 0
- mRNA
-
…agrees exactly with CDS/UTR coordinates of its children
successes 7974
failures 0
runtime errors 0
-
…only contains allowed attributes
successes 7974
failures 0
runtime errors 0
-
…has a coding sequence >= 3bp
successes 7974
failures 0
runtime errors 0
-
…has at least one CDS child
successes 7974
failures 0
runtime errors 0
-
…has only allowed child types
successes 7974
failures 0
runtime errors 0
-
…has non-partial CDS ending on a stop codon
successes 7714
failures 250
runtime errors 0
-
ID:
LdBPK_140370.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
10651
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
-
ID:
LdBPK_242170.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
23338
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_170770.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
14131
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_140730.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
10905
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
-
ID:
LdBPK_201210.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
17664
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_310360.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
35026
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: I does not match pattern [*+#]
-
ID:
LdBPK_191340.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
16606
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
-
ID:
LdBPK_230580.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
20969
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: N does not match pattern [*+#]
-
ID:
LdBPK_090460.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
6082
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
-
ID:
LdBPK_340850.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
42418
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
-
ID:
LdBPK_302530.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
34008
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: F does not match pattern [*+#]
-
ID:
LdBPK_361690.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
49238
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: M does not match pattern [*+#]
-
ID:
LdBPK_050380.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
2798
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
-
ID:
LdBPK_170120.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
13698
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
-
ID:
LdBPK_210680.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
18481
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_240560.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
22280
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: C does not match pattern [*+#]
-
ID:
LdBPK_310880.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
35380
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
-
ID:
LdBPK_070720.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
4651
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
-
ID:
LdBPK_150490.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
11807
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
-
ID:
LdBPK_180690.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
15083
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
-
ID:
LdBPK_180170.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
14761
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
-
ID:
LdBPK_291620.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
31487
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
-
ID:
LdBPK_323320.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
39129
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: W does not match pattern [*+#]
-
ID:
LdBPK_020180.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
769
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
-
ID:
LdBPK_330770.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
40150
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_210690.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
18489
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_240440.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
22190
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
-
ID:
LdBPK_311430.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
35773
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
-
ID:
LdBPK_313180.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
36923
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
-
ID:
LdBPK_365240.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
51476
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
-
ID:
LdBPK_201220.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
17674
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_201720.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
18000
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: C does not match pattern [*+#]
-
ID:
LdBPK_350500.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
45045
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
-
ID:
LdBPK_110630.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
8190
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
-
ID:
LdBPK_291170.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
31167
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: M does not match pattern [*+#]
-
ID:
LdBPK_080760.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
5496
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: W does not match pattern [*+#]
-
ID:
LdBPK_111130.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
8547
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
-
ID:
LdBPK_111220.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
8601
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
-
ID:
LdBPK_161070.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
13205
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: M does not match pattern [*+#]
-
ID:
LdBPK_302540.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
34018
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
-
ID:
LdBPK_050500.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
2876
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
-
ID:
LdBPK_161030.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
13159
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
-
ID:
LdBPK_330860.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
40209
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_091130.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
6528
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
-
ID:
LdBPK_240350.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
22112
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
-
ID:
LdBPK_340480.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
42160
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
-
ID:
LdBPK_230880.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
21200
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: N does not match pattern [*+#]
-
ID:
LdBPK_110970.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
8443
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
-
ID:
LdBPK_271220.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
27620
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: I does not match pattern [*+#]
-
ID:
LdBPK_354010.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
47228
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
-
ID:
LdBPK_070700.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
4637
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
-
ID:
LdBPK_030260.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
1286
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
-
ID:
LdBPK_160610.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
12907
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: H does not match pattern [*+#]
-
ID:
LdBPK_030820.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
35396
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
-
ID:
LdBPK_220890.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
20119
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_100510.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
7162
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_311870.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
36077
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_251100.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
24174
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
-
ID:
LdBPK_181230.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
15437
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
-
ID:
LdBPK_201500.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
17858
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
-
ID:
LdBPK_342730.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
43682
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
-
ID:
LdBPK_354060.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
47262
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: Q does not match pattern [*+#]
-
ID:
LdBPK_210570.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
18404
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
-
ID:
LdBPK_220760.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
20033
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
-
ID:
LdBPK_281600.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
29415
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
-
ID:
LdBPK_201370.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
17768
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
-
ID:
LdBPK_341510.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
42873
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
-
ID:
LdBPK_040760.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
2257
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
-
ID:
LdBPK_340840.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
42408
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_040180.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
1867
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_100410.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
7102
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
-
ID:
LdBPK_292580.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
32124
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: Q does not match pattern [*+#]
-
ID:
LdBPK_100400.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
7088
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_141350.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
11320
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: C does not match pattern [*+#]
-
ID:
LdBPK_201410.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
17798
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
-
ID:
LdBPK_141190.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
11212
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
-
ID:
LdBPK_301910.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
33603
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_150970.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
12111
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_100380.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
7070
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: F does not match pattern [*+#]
-
ID:
LdBPK_210910.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
18631
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: N does not match pattern [*+#]
-
ID:
LdBPK_241430.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
22839
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: I does not match pattern [*+#]
-
ID:
LdBPK_170740.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
14094
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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43021
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Ldonovani_BPK282A1.noseq.gff3,
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3423
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21468
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Ldonovani_BPK282A1.noseq.gff3,
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5630
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Ldonovani_BPK282A1.noseq.gff3,
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44543
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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30231
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Ldonovani_BPK282A1.noseq.gff3,
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26130
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Ldonovani_BPK282A1.noseq.gff3,
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26989
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Ldonovani_BPK282A1.noseq.gff3,
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17149
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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22124
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Ldonovani_BPK282A1.noseq.gff3,
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26140
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Ldonovani_BPK282A1.noseq.gff3,
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15427
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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Ldonovani_BPK282A1.noseq.gff3,
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7080
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
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ID:
LdBPK_221180.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
20311
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
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ID:
LdBPK_291880.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
31648
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
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ID:
LdBPK_110960.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
8435
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
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ID:
LdBPK_350030.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
44745
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: C does not match pattern [*+#]
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ID:
LdBPK_302480.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
33974
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
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ID:
LdBPK_201420.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
17806
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
42316
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
2714
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
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ID:
LdBPK_242140.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
23312
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: I does not match pattern [*+#]
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ID:
LdBPK_292500.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
32062
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
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ID:
LdBPK_161050.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
13185
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: X does not match pattern [*+#]
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ID:
LdBPK_350290.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
44901
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
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ID:
LdBPK_301260.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
33175
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
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ID:
LdBPK_311300.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
35674
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
52455
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: Y does not match pattern [*+#]
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ID:
LdBPK_303390.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
34554
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
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ID:
LdBPK_351170.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
45437
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
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ID:
LdBPK_312610.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
36559
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
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ID:
LdBPK_170140.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
13726
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
50677
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
14102
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
35662
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: C does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
47545
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: F does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
19435
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: N does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
20469
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
25114
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
36051
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
2192
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: H does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
38569
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
20725
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
10421
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
17141
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
45409
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
6028
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
18018
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
33321
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
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ID:
LdBPK_364590.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
51054
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
32196
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
40429
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
16205
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: Q does not match pattern [*+#]
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ID:
LdBPK_241570.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
22933
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: N does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
27158
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
48908
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
4215
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: R does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
35344
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
5904
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
21418
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
8238
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: F does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
14777
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
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ID:
LdBPK_044280.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
44647
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
19755
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
31151
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
26485
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: E does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
45609
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
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ID:
LdBPK_080950.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
5622
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: H does not match pattern [*+#]
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ID:
LdBPK_070950.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
4786
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
-
ID:
LdBPK_100950.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
7452
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: K does not match pattern [*+#]
-
ID:
LdBPK_292490.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
32052
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_181490.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
15625
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: T does not match pattern [*+#]
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ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
22729
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
-
ID:
LdBPK_170130.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
13714
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
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ID:
LdBPK_181380.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
15543
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
-
ID:
LdBPK_260590.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
25484
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
-
ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
35404
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: L does not match pattern [*+#]
-
ID:
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Ldonovani_BPK282A1.noseq.gff3,
line
42462
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: S does not match pattern [*+#]
-
ID:
LdBPK_060080.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
3411
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: C does not match pattern [*+#]
-
ID:
LdBPK_361330.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
48982
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: V does not match pattern [*+#]
-
ID:
LdBPK_110070.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
7817
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: D does not match pattern [*+#]
-
ID:
LdBPK_241310.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
22759
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: F does not match pattern [*+#]
-
ID:
LdBPK_351450.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
45617
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_301520.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
33345
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: G does not match pattern [*+#]
-
ID:
LdBPK_013340.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
37033
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: C does not match pattern [*+#]
-
ID:
LdBPK_323350.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
39155
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: A does not match pattern [*+#]
-
ID:
LdBPK_091140.1.1, file
Ldonovani_BPK282A1.noseq.gff3,
line
6538
- /nfs/users/nfs_s/ss34/new_gff_format.lua:186: P does not match pattern [*+#]
-
…has non-selenocysteine CDS with no internal stop codons
successes 7973
failures 0
runtime errors 0
-
…consists of less than 50% Ns
successes 7974
failures 0
runtime errors 0
-
…appears as part of a gene
successes 7974
failures 0
runtime errors 0
- polypeptide
-
…agrees exactly with CDS of >=1 overlapping coding transcripts
successes 8026
failures 0
runtime errors 0
-
…only contains allowed attributes
successes 8026
failures 0
runtime errors 0
-
…has a required product attribute
successes 7990
failures 36
runtime errors 0
-
ID:
LdBPK_120255.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8866
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_055450.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
48135
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_072480.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
28424
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120110.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8778
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_072500.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
28434
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_013340.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
37036
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120060r.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
9270
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_090455.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
6079
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120090.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8766
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_013370.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
1655
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120120.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8784
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120145.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8808
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120661.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
9174
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120075.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8754
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120105.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8884
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_013360.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
1661
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_013350.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
37042
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_073400.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
37054
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120130.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8790
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120275.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8910
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120667.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
9206
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120050.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8736
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_030970.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
1649
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120070r.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
9264
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120155.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8814
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120041.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8730
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_021560.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
20560
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_044260.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
44574
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_093020.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
31350
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120040.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8724
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120265.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8904
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_052580.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
25117
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120020.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8712
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120010.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8706
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_120030.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
8718
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
ID:
LdBPK_070095.1.1:pep, file
Ldonovani_BPK282A1.noseq.gff3,
line
46759
- /nfs/users/nfs_s/ss34/new_gff_format.lua:307: should not be nil but is nil
-
…overlaps the transcript it derives_from
successes 8026
failures 0
runtime errors 0
-
…must be derived_from a unique mRNA
successes 8026
failures 0
runtime errors 0
-
…appears as a root node
successes 8026
failures 0
runtime errors 0
-
-
-
-
-