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java.lang.Object | +--uk.ac.sanger.psu.gfmerge.datacomp.GFMergeFeature | +--uk.ac.sanger.psu.gfmerge.datacomp.SimFeature
class is representing a similarity feature used as evidence for correct predictions.
This class wraps the BioJava Feature class and contains feature hits. Those hits are either a Blast or a cDNA feature. For example:
SimFeature simFeature = new SimFeature(feature);
GeneModel
,
LocateAble
Field Summary |
Fields inherited from class uk.ac.sanger.psu.gfmerge.datacomp.GFMergeFeature |
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Constructor Summary | |
SimFeature(org.biojava.bio.seq.StrandedFeature feature)
constructor for SimFeature objects |
Methods inherited from class uk.ac.sanger.psu.gfmerge.datacomp.GFMergeFeature |
getExons, getFeature, getIntrons, getLength, getLocation, getStrand, getTotalExonLength |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
public SimFeature(org.biojava.bio.seq.StrandedFeature feature)
feature
- BioJava feature object
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