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java.lang.Object | +--uk.ac.sanger.psu.gfmerge.datacomp.FeatureComponent | +--uk.ac.sanger.psu.gfmerge.datacomp.Intron
class Intron is representing an biological intron which is the Location inbetween two sublocation of a feature.
For example:
Intron intron = new Intron(geneModel, location);
Exon
,
FeatureComponent
,
ExonAble
Field Summary |
Fields inherited from class uk.ac.sanger.psu.gfmerge.datacomp.FeatureComponent |
|
Constructor Summary | |
Intron(GFMergeFeature _gfmFeature,
org.biojava.bio.symbol.Location _location)
constructor for Intron objects |
Methods inherited from class uk.ac.sanger.psu.gfmerge.datacomp.FeatureComponent |
getGfmFeature, getLength, getLocation |
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Methods inherited from interface uk.ac.sanger.psu.gfmerge.datacomp.FeatureComponentAble |
getGfmFeature, getLength |
Methods inherited from interface uk.ac.sanger.psu.gfmerge.datacomp.LocateAble |
getLocation |
Constructor Detail |
public Intron(GFMergeFeature _gfmFeature, org.biojava.bio.symbol.Location _location)
_gfmFeature
- Genemodel or SimFeature object (genemodel, cDNA,
Blast)_location
- location on sequence
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