TABLES.CHR2_ARS.TXT *************************************************************************** The content of this file is part of the data unraveled by a consortium of European laboratories supported by the Commission of the European Union in the framework of sequencing yeast chromosome II. H. Feldmann et al. (1994) ' Complete sequence of yeast chromosome II', submitted The dataset was developed in collaboration of H.W. Mewes Martinsried Institute for Protein Sequences (MIPS) Max-Planck-Institut fuer Biochemie, 85152 Martinsried, Germany Telephone:+49 89 8578 2656 FAX +49 89 8578 2655 e-mail mewes@ehpmic.mips.biochem.mpg.de e-mail mewes@mips.embnet.org and Horst Feldmann Institut fuer Physiologische Chemie, Universitaet Muenchen, Schillerstrasse 44, 80336 Muenchen, Germany Telephone:+49 89 5996 451 FAX +49 89 5996 316 e-mail feldmann@dec1.bio.med.uni-muenchen.de >>>> The data may be used for scientific purposes under the condition that the proper references are given. <<<<< We have made every effort to ensure liability of the data and cannot be responsible for the consequences to users of any errors resulting from its use. *************************************************************************** Table 10. Yeast chromosome II: List of ARS consensus sequences, putative ABF1 and OBF1 binding sites (A) ARS consensus sequences 1 WTTTATRTTTW 116,603: TTTTT TTTTATATTTT TTTTC 189,772: TATGA TTTTATGTTTA TAAAG 232,297: AATTA TTTTATGTTTT TGTTT 320,083: GAGAG TTTTATGTTTA CAGTA 362,748: CTAAG TTTTATATTTT CTGCA 375,152: CATTT TTTTATGTTTT TTCTA 414,241: CCCCT TTTTATGTTTT GGTTT 537,400: GGACA TTTTATATTTT TGAGC 562,826: GATTT TTTTATATTTT AATCA 597,195: GCATC ATTTATGTTTT CCCCA 616,765: TTTTT ATTTATATTTT TCTTC 626,058: TATTT ATTTATATTTA TTTTT 659,044: ATATT ATTTATGTTTT TCTCA 749,039: ATGCT TTTTATATTTT CTTTC 786,471: TATCG ATTTATATTTT CCAAC 806,421: AATAT TTTTATGTTTA GGTGA 1 /Rev WAAAYATAAAW 606: TCACC TAAACATAAAA ATTAT 78,493: AAGGT TAAACATAAAA AGTAG 95,810: AACGA TAAACATAAAA TAAAC 160,181: AAATG AAAATATAAAT TACAA 164,252: TTCAC TAAATATAAAA CTGAT 235,361: AAGGG AAAATATAAAT AAATA 239,287: GTTAG AAAATATAAAA CAATA 249,070: AATAC AAAACATAAAA ATAAA 250,788: ACAAT AAAATATAAAT CAATA 282,745: GAGGG AAAATATAAAT GTTTT 327,080: CGAGT AAAATATAAAT TATTT 367,704: TAAAA AAAATATAAAA TTACA 389,074: GAAAT AAAATATAAAA AAATT 402,040: AGAAC AAAATATAAAT AAATA 452,542: ACACG AAAATATAAAT ACATC 498,501: TCAAA AAAATATAAAA ACACT 565,473: CATAT TAAACATAAAT ACGCA 613,671: CTATC TAAATATAAAT ATGTG 768,035: TTTCA TAAACATAAAA TCCTT 786,778: AATTA TAAATATAAAA GCAAG Total finds: 36 (B) ARS-binding factor 1, consensus sequences 1 RTCRYNNNNNACG 385: CCCAC ATCATTATGCACG GCACT 31,992: CTTTG ATCGTCTATGACG ATTTG 34,678: TGTTG ATCACGCGAAACG GTAAA 41,300: AATGC ATCATTCTAAACG GGCGG 61,354: GTGGC ATCATCAGGAACG AGTTT 69,105: TCTAT ATCGTGTTGCACG AAGGA 95,371: CGTTG GTCGCTATTCACG GAATG 109,599: TACAG GTCGTCTTCCACG TGGTA 114,178: AGTTT GTCATATTTGACG CGAGG 122,973: TCAAC ATCATCTCTTACG GATTG 130,207: ATTGG ATCACGGGCGACG GACAA 139,544: CCACC GTCGTCAAGCACG AAACA 139,941: TTGTT ATCACCAATAACG AGAAA 140,015: GTTGA ATCACTAATTACG AAAGA 187,682: CCGTG ATCGCGCGCCACG GGCCG 191,757: AATAC GTCATCCTGAACG TTCAT 195,366: ATAGA ATCATTACCAACG TCAAC 210,545: GTATA GTCACTTTCTACG AAGCA 221,065: ATGAT ATCATGTAAAACG AGGCA 264,061: GGCTG GTCGCGCCCGACG GGTTC 274,673: TTAGC ATCACAAAATACG CAATA 279,792: CGTCC ATCATTCCTAACG CTATC 285,453: TCAAC GTCACCCTCAACG TGGAT 286,148: GCGTG GTCATTCAATACG GAGAA 291,526: CACTG ATCATAACAAACG TCCAA 293,985: TTAAT ATCACGTCACACG ACGCA 303,967: TGAGG ATCATCCAACACG TGCGA 330,379: TCGTC GTCGTCATCCACG ACTAT 331,505: ATTGC GTCACTCGCGACG TAAAC 336,135: TTCAT ATCACGGCATACG TTAAC 345,493: CTTGT ATCATCATGAACG CTTTT 350,717: TAAAC GTCATCTCGCACG ATATG 369,261: CTTGG ATCATGAAGTACG TCTCG 381,462: TGGCT ATCGTGGACCACG CTTTC 386,473: TTCAT ATCATTATCAACG TAAAA 386,537: GCAGT ATCATCCTTCACG ACCCG 388,216: GTCTC ATCGTCTCCAACG CATGA 403,527: GAAAC GTCGTCAACAACG GAATC 421,906: ACAGC ATCGTTAATGACG TATCT 423,756: ACAGC ATCGTTAATGACG TATCT 438,885: GGTAT ATCATTTCAAACG AATAA 446,371: TAGAT ATCGTTCTGAACG GCTGA 446,409: AGAAC ATCACTTTACACG GATCG 452,529: GTCAT ATCACAGTACACG AAAAT 452,735: CAGTG ATCATCTTGCACG TTGCT 478,638: AGATA ATCGCTCTTTACG GTTTG 555,109: TATTC ATCGTCATATACG GAACA 570,367: GAAGG ATCATGACTAACG TTTGC 589,283: CCACT ATCATCGGGAACG GTACA 639,411: ATATT GTCGTGGGCCACG AATGA 667,817: GGGCA ATCATAATTAACG TTTAG 676,094: GCAGC ATCGTTATACACG TAGTG 688,224: GGTCG ATCATCTTTTACG CCAAG 741,603: AATGA ATCATAGGATACG TTAGA 755,096: TAATA ATCACATTACACG AATAA 762,107: TTATT ATCACGTTTCACG GATTA 776,456: TTATC ATCGTGTTATACG ATGCG 1 /Rev CGTNNNNNRYGAY 15,429: ATCGC CGTAAAGTATGAT GTGTA 31,994: TTGAT CGTCTATGACGAT TTGTC 55,409: GTGCT CGTGACATATGAC TCCAA 81,932: GTGTT CGTGCGTCGCGAT TTTTT 95,411: CTGCT CGTCCTGGGTGAC CTTTT 107,545: ATTTT CGTCAGGCGTGAT ATCAG 118,931: GCATC CGTGTTTCGTGAC ATCAT 135,105: GTGTT CGTACGGAGCGAT AATTG 147,857: CTATT CGTTTGAGGCGAT GAACA 158,361: GTGCT CGTGCATCGTGAT GTTAT 166,359: ACTTA CGTATTAAATGAC GTACT 174,352: GTTAG CGTCTTCAACGAC GGTCG 180,593: TATGA CGTTCTCGATGAT CTTCA 180,629: TTTCC CGTAACATATGAT ATATC 196,445: TGCTC CGTTCAACGCGAT CATTG 226,777: TACCT CGTCCAGTATGAT TGTTA 232,398: CCTTA CGTCGGTGACGAC GATAT 232,678: CAAAG CGTAAGTTATGAT CTTAT 252,148: ACTAT CGTATCTAATGAC TGTGG 252,185: CTTAG CGTCTGCGATGAC GATAT 281,182: CTTAC CGTTAATTACGAC AAATT 284,723: ATCAC CGTCTTCAACGAC ATAGT 291,113: GAGCA CGTTTTTGATGAT CAAAT 291,940: GTATC CGTTGATAATGAC TGTCA 303,702: GACCG CGTTCATCATGAT GAGGA 304,636: CTTAA CGTGTTCCACGAT CTTGT 330,381: GTCGT CGTCATCCACGAC TATGT 331,504: AATTG CGTCACTCGCGAC GTAAA 358,693: TATAT CGTTTTTAATGAT TGCAA 395,017: CCTAA CGTATAGTGTGAT ACCGA 420,547: CTTGT CGTGCGCTATGAT AAACA 460,568: CCCTT CGTCCTCAGTGAC CTCTC 472,640: GGTAA CGTCTGTGGTGAC GCTAA 477,641: CGAGG CGTAGAAAATGAT CACTA 489,473: AAAAC CGTTGTGAGTGAC CGAAA 529,087: CTTTA CGTATAAAATGAT ATATT 555,180: CTGGG CGTGTTCCATGAC GTATT 559,079: GATCT CGTGGTATGTGAT ATCGT 559,094: GATAT CGTGTCTAATGAC TTGAC 561,196: AATCT CGTTTCGAATGAT TTAAT 562,660: TTACC CGTCCTGTACGAT GCAGT 570,201: CTCCT CGTATGATGTGAT TTTTG 584,460: CATAG CGTATTTCATGAT GGGTC 587,789: ACATC CGTTTTCGGTGAT GCGGT 609,263: CTCAC CGTCAAGTGCGAT TTCCG 609,464: GAACC CGTCGTTGACGAT AGGTT 612,687: GAACC CGTAAAAGATGAT ATTTA 631,956: ATAGG CGTTTCGAATGAT GGTAA 641,330: TTCTC CGTACAACACGAT AAAAT 645,190: CTGCT CGTCTTGAGCGAC AGGGC 656,735: GGACA CGTCGTTAGTGAC AATCG 662,718: TAAGT CGTATGGTATGAC TGGCA 696,995: CCCGA CGTGGTCGATGAT CGCAG 734,688: GAAGA CGTGGGCAGCGAC GAAGC 764,742: GAAAG CGTGTAAAGTGAT ACAGA 764,766: CCTAC CGTGTCTAATGAT ATCGT 765,275: TTTTT CGTTGAATGCGAC TCTTA 776,458: ATCAT CGTGTTATACGAT GCGGA 780,979: TTCGA CGTACCAAACGAT TGGTA 801,275: ATCCT CGTTCATTATGAT ATTTA 806,640: AGTGC CGTGAATAATGAT GTGAG Total finds: 118 (C) Origin of replication-binding factor 1, consensus sequences 1 CAAGTGCCGTGCATAATGATGTGGGT 806,633: TGAGG caagtgccgtgaataatgatgtgagt GCATT mis=2 1 /Rev ACCCACATCATTATGCACGGCACTTG 379: AATGC ACCCACATCATTATGCACGGCACTTG CCTCA Total finds: 2