Sequence and Annotation File Formats

Artemis reads in the common sequence and annotation file formats. As larger data sets become more common it is now possible to index some of these formats (FASTA and GFF3) to speed up and improve the performance of Artemis. Artemis can read the following sequence and annotation file formats. As discussed in the next section these can be read individually or as a combination of different annotation files being read in and overlaid on the same sequence.