Uses of Package
uk.ac.sanger.cgp.standalonecsa.beans

Packages that use uk.ac.sanger.cgp.standalonecsa.beans
uk.ac.sanger.cgp.standalonecsa.beans The beans used by Standalone AutoCSA. 
uk.ac.sanger.cgp.standalonecsa.interfaces The service interface classes used in Standalone AutoCSA. 
uk.ac.sanger.cgp.standalonecsa.services The implementations of the services used in Standalone AutoCSA. 
uk.ac.sanger.cgp.standalonecsa.util The utility classes used in Standalone AutoCSA. 
 

Classes in uk.ac.sanger.cgp.standalonecsa.beans used by uk.ac.sanger.cgp.standalonecsa.beans
AmplimerBean
          This object handles information pertaining to the amplimer and any associated mappings.
CdsBean
          A CdsBean holds information regarding the name, dna sequence, protein sequence and coding orientation of the CDS.
ExperimentBean
          Holds all information regarding an experiment (sequencing trace).
FeatureBean
           
 

Classes in uk.ac.sanger.cgp.standalonecsa.beans used by uk.ac.sanger.cgp.standalonecsa.interfaces
AmplimerBean
          This object handles information pertaining to the amplimer and any associated mappings.
CdsBean
          A CdsBean holds information regarding the name, dna sequence, protein sequence and coding orientation of the CDS.
ChromRenderBean
           
ExperimentBean
          Holds all information regarding an experiment (sequencing trace).
TraceGroupBean
          This object is used to group the variant and wildtype experiments by amplimer.
 

Classes in uk.ac.sanger.cgp.standalonecsa.beans used by uk.ac.sanger.cgp.standalonecsa.services
AmplimerBean
          This object handles information pertaining to the amplimer and any associated mappings.
CdsBean
          A CdsBean holds information regarding the name, dna sequence, protein sequence and coding orientation of the CDS.
ChromRenderBean
           
ExperimentBean
          Holds all information regarding an experiment (sequencing trace).
TraceGroupBean
          This object is used to group the variant and wildtype experiments by amplimer.
 

Classes in uk.ac.sanger.cgp.standalonecsa.beans used by uk.ac.sanger.cgp.standalonecsa.util
ExperimentBean
          Holds all information regarding an experiment (sequencing trace).
FileProcessingInfoBean
          Object to hold all information related to file name construction and processing loaded from standaloneCsa.properties.