uk.ac.sanger.cgp.standalonecsa.util
Class SetupUtils
java.lang.Object
uk.ac.sanger.cgp.standalonecsa.util.SetupUtils
public class SetupUtils
- extends java.lang.Object
- Author:
- Original: kr2, $Author: kr2 $
Constructor Summary |
protected |
SetupUtils()
Creates a new instance of FileHandler |
Method Summary |
static java.util.Properties |
buildPropertiesGui()
|
static void |
checkAndBuildComponent(java.util.Properties props,
java.lang.String input,
java.lang.String resultKey,
java.lang.String checkPat)
|
static java.io.File |
checkForLocation(java.lang.String fileLoc)
|
static java.io.File |
chooseInput(boolean selDirs,
java.awt.Component parent)
|
static java.io.File |
chooseInput(boolean selDirs,
java.io.File startAt,
java.awt.Component parent)
|
static void |
createCsaAnalysisPropFile(java.lang.String rootDir)
|
static void |
createDefaultResources()
|
static void |
createDefaultResources(java.lang.String rootDir)
|
static void |
createMobCorrFiles(java.lang.String rootDir)
|
static java.lang.String |
fileDisplayForGui(java.lang.String exampleFile,
java.lang.String delim,
java.lang.String extension)
|
static void |
reconfigure()
|
static boolean |
setupSystem()
|
static void |
writeProperties(java.util.Properties props,
java.lang.String outputLoc,
java.lang.String comment)
|
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
log
protected static final org.apache.commons.logging.Log log
ALPHA_NUMERIC
public static final java.lang.String ALPHA_NUMERIC
- See Also:
- Constant Field Values
CHAR_ONLY
public static final java.lang.String CHAR_ONLY
- See Also:
- Constant Field Values
DIGITS_ONLY
public static final java.lang.String DIGITS_ONLY
- See Also:
- Constant Field Values
setupInfo
public static final java.util.Properties setupInfo
SetupUtils
protected SetupUtils()
- Creates a new instance of FileHandler
reconfigure
public static void reconfigure()
setupSystem
public static boolean setupSystem()
createDefaultResources
public static void createDefaultResources()
createDefaultResources
public static void createDefaultResources(java.lang.String rootDir)
createCsaAnalysisPropFile
public static void createCsaAnalysisPropFile(java.lang.String rootDir)
createMobCorrFiles
public static void createMobCorrFiles(java.lang.String rootDir)
buildPropertiesGui
public static java.util.Properties buildPropertiesGui()
checkAndBuildComponent
public static void checkAndBuildComponent(java.util.Properties props,
java.lang.String input,
java.lang.String resultKey,
java.lang.String checkPat)
fileDisplayForGui
public static java.lang.String fileDisplayForGui(java.lang.String exampleFile,
java.lang.String delim,
java.lang.String extension)
writeProperties
public static void writeProperties(java.util.Properties props,
java.lang.String outputLoc,
java.lang.String comment)
chooseInput
public static java.io.File chooseInput(boolean selDirs,
java.io.File startAt,
java.awt.Component parent)
chooseInput
public static java.io.File chooseInput(boolean selDirs,
java.awt.Component parent)
checkForLocation
public static java.io.File checkForLocation(java.lang.String fileLoc)