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Hierarchy For All Packages
Package Hierarchies:
uk.ac.sanger.cgp.standalonecsa.beans
,
uk.ac.sanger.cgp.standalonecsa.control
,
uk.ac.sanger.cgp.standalonecsa.enums
,
uk.ac.sanger.cgp.standalonecsa.exceptions
,
uk.ac.sanger.cgp.standalonecsa.gui
,
uk.ac.sanger.cgp.standalonecsa.interfaces
,
uk.ac.sanger.cgp.standalonecsa.jabawat
,
uk.ac.sanger.cgp.standalonecsa.services
,
uk.ac.sanger.cgp.standalonecsa.util
Class Hierarchy
java.lang.Object
org.biojava.bio.chromatogram.AbstractChromatogram (implements org.biojava.bio.chromatogram.Chromatogram)
org.biojava.bio.program.abi.ABIFChromatogram
uk.ac.sanger.cgp.standalonecsa.util.
FileHandler
uk.ac.sanger.cgp.standalonecsa.services.
AlignmentServiceImpl
(implements uk.ac.sanger.cgp.standalonecsa.interfaces.
AlignmentService
)
uk.ac.sanger.cgp.standalonecsa.beans.
AmplimerBean
(implements java.io.Serializable)
uk.ac.sanger.cgp.standalonecsa.services.
AnalysisServiceImpl
(implements uk.ac.sanger.cgp.standalonecsa.interfaces.
AnalysisService
)
uk.ac.sanger.cgp.standalonecsa.beans.
CdsBean
(implements java.io.Serializable)
uk.ac.sanger.cgp.standalonecsa.services.
ChromatogramServiceImpl
(implements uk.ac.sanger.cgp.standalonecsa.interfaces.
ChromatogramService
)
uk.ac.sanger.cgp.standalonecsa.beans.
ChromRenderBean
java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
java.awt.Container
java.awt.Window (implements javax.accessibility.Accessible)
java.awt.Dialog
javax.swing.JDialog (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
uk.ac.sanger.cgp.standalonecsa.gui.
SetupBase
uk.ac.sanger.cgp.standalonecsa.beans.
Constants
uk.ac.sanger.cgp.standalonecsa.beans.
Constants.PreFlagging
uk.ac.sanger.cgp.standalonecsa.beans.
Constants.TraceStatus
uk.ac.sanger.cgp.standalonecsa.beans.
Constants.VariantType
uk.ac.sanger.cgp.standalonecsa.beans.
Constants.Zygosity
uk.ac.sanger.cgp.standalonecsa.util.
CsaConfig
uk.ac.sanger.cgp.standalonecsa.enums.
CsaError
uk.ac.sanger.cgp.standalonecsa.beans.
ExperimentBean
(implements java.lang.Comparable<T>)
uk.ac.sanger.cgp.standalonecsa.beans.
FeatureBean
uk.ac.sanger.cgp.standalonecsa.enums.
FeatureType
uk.ac.sanger.cgp.standalonecsa.services.
FileLocatorServiceImpl
(implements uk.ac.sanger.cgp.standalonecsa.interfaces.
FileLocatorService
)
uk.ac.sanger.cgp.standalonecsa.beans.
FileProcessingInfoBean
uk.ac.sanger.cgp.standalonecsa.services.
FlaggingServiceImpl
(implements uk.ac.sanger.cgp.standalonecsa.interfaces.
FlaggingService
)
uk.ac.sanger.cgp.standalonecsa.jabawat.
Jabawat
uk.ac.sanger.cgp.standalonecsa.jabawat.
JabawatResults
uk.ac.sanger.cgp.standalonecsa.util.
PropertyUtils
uk.ac.sanger.cgp.standalonecsa.util.
SetupUtils
uk.ac.sanger.cgp.standalonecsa.util.
SimpleChromGraphic
uk.ac.sanger.cgp.standalonecsa.control.
StandaloneCsa
java.lang.Throwable (implements java.io.Serializable)
java.lang.Exception
uk.ac.sanger.cgp.standalonecsa.exceptions.
CsaRenderException
java.lang.RuntimeException
uk.ac.sanger.cgp.standalonecsa.exceptions.
CsaRuntimeAlignmentException
uk.ac.sanger.cgp.standalonecsa.exceptions.
CsaRuntimeException
uk.ac.sanger.cgp.standalonecsa.beans.
TraceGroupBean
uk.ac.sanger.cgp.standalonecsa.beans.
VariantGroup
uk.ac.sanger.cgp.standalonecsa.enums.
VariantType
uk.ac.sanger.cgp.standalonecsa.services.
VelocityLogImpl
(implements org.apache.velocity.runtime.log.LogSystem)
uk.ac.sanger.cgp.standalonecsa.services.
ViewServiceImpl
(implements uk.ac.sanger.cgp.standalonecsa.interfaces.
ViewService
)
Interface Hierarchy
uk.ac.sanger.cgp.standalonecsa.interfaces.
AlignmentService
uk.ac.sanger.cgp.standalonecsa.interfaces.
AnalysisService
uk.ac.sanger.cgp.standalonecsa.interfaces.
ChromatogramService
uk.ac.sanger.cgp.standalonecsa.interfaces.
FileLocatorService
uk.ac.sanger.cgp.standalonecsa.interfaces.
FlaggingService
uk.ac.sanger.cgp.standalonecsa.interfaces.
ViewService
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