path sample /lustre/scratch105/vrpipe/results/d/8/b/0/1110143/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431240 /lustre/scratch105/vrpipe/results/8/c/7/5/1110161/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5456153 /lustre/scratch105/vrpipe/results/0/b/c/d/1110155/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5456147 /lustre/scratch105/vrpipe/results/1/1/4/c/1110146/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431244 /lustre/scratch105/vrpipe/results/3/c/9/a/1110145/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431242 /lustre/scratch105/vrpipe/results/d/c/b/7/1110152/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431670 /lustre/scratch105/vrpipe/results/0/c/c/3/1110140/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431237 /lustre/scratch105/vrpipe/results/1/0/2/a/1110107/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431203 /lustre/scratch105/vrpipe/results/0/6/6/1/1110136/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431233 /lustre/scratch105/vrpipe/results/3/6/4/6/1110097/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431188 /lustre/scratch105/vrpipe/results/4/b/1/d/1110117/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431214 /lustre/scratch105/vrpipe/results/3/d/a/8/1110125/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431222 /lustre/scratch105/vrpipe/results/3/9/9/5/1110102/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431196 /lustre/scratch105/vrpipe/results/d/5/3/c/1110121/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431218 /lustre/scratch105/vrpipe/results/4/5/d/a/1110134/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431231 /lustre/scratch105/vrpipe/results/2/1/f/b/1110147/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431246 /lustre/scratch105/vrpipe/results/1/8/9/5/1110104/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431198 /lustre/scratch105/vrpipe/results/e/e/1/a/1110154/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5456146 /lustre/scratch105/vrpipe/results/d/9/a/8/1110160/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5456152 /lustre/scratch105/vrpipe/results/7/0/4/d/1110126/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431223 /lustre/scratch105/vrpipe/results/2/2/6/0/1110128/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431225 /lustre/scratch105/vrpipe/results/8/a/5/a/1110135/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431232 /lustre/scratch105/vrpipe/results/8/b/a/c/1110153/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431671 /lustre/scratch105/vrpipe/results/7/7/f/d/1110110/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431206 /lustre/scratch105/vrpipe/results/3/4/1/f/1110105/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431199 /lustre/scratch105/vrpipe/results/4/f/3/c/1110100/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431194 /lustre/scratch105/vrpipe/results/2/e/a/a/1110144/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431241 /lustre/scratch105/vrpipe/results/0/8/2/0/1110141/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431238 /lustre/scratch105/vrpipe/results/8/b/1/c/1110130/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431227 /lustre/scratch105/vrpipe/results/c/c/e/9/1110101/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431195 /lustre/scratch105/vrpipe/results/e/8/c/f/1110137/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431234 /lustre/scratch105/vrpipe/results/8/6/c/1/1110115/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431212 /lustre/scratch105/vrpipe/results/e/f/b/7/1110138/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431235 /lustre/scratch105/vrpipe/results/7/2/5/5/1110098/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431190 /lustre/scratch105/vrpipe/results/4/2/2/c/1110122/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431219 /lustre/scratch105/vrpipe/results/e/7/3/6/1110111/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431207 /lustre/scratch105/vrpipe/results/4/d/f/d/1110123/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431220 /lustre/scratch105/vrpipe/results/e/4/a/f/1110124/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431221 /lustre/scratch105/vrpipe/results/f/2/5/3/1110159/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5456151 /lustre/scratch105/vrpipe/results/a/d/d/4/1110150/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431668 /lustre/scratch105/vrpipe/results/5/e/f/9/1110142/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431239 /lustre/scratch105/vrpipe/results/4/5/3/c/1110127/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431224 /lustre/scratch105/vrpipe/results/9/9/2/d/1110149/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431667 /lustre/scratch105/vrpipe/results/9/7/8/8/1110119/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431216 /lustre/scratch105/vrpipe/results/3/6/1/1/1110108/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431204 /lustre/scratch105/vrpipe/results/7/6/6/4/1110151/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431669 /lustre/scratch105/vrpipe/results/0/4/9/b/1110156/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5456148 /lustre/scratch105/vrpipe/results/d/1/3/4/1110099/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431192 /lustre/scratch105/vrpipe/results/b/f/8/d/1110132/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431229 /lustre/scratch105/vrpipe/results/d/7/2/5/1110148/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431666 /lustre/scratch105/vrpipe/results/a/9/9/3/1110131/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431228 /lustre/scratch105/vrpipe/results/6/0/d/c/1110109/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431205 /lustre/scratch105/vrpipe/results/e/0/6/e/1110114/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431211 /lustre/scratch105/vrpipe/results/1/7/c/3/1110139/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431236 /lustre/scratch105/vrpipe/results/6/b/f/2/1110158/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5456150 /lustre/scratch105/vrpipe/results/3/c/9/1/1110157/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5456149 /lustre/scratch105/vrpipe/results/1/a/9/0/1110095/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431186 /lustre/scratch105/vrpipe/results/9/3/f/a/1110129/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431226 /lustre/scratch105/vrpipe/results/0/1/8/3/1110116/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431213 /lustre/scratch105/vrpipe/results/f/7/6/9/1110120/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431217 /lustre/scratch105/vrpipe/results/d/7/0/b/1110118/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431215 /lustre/scratch105/vrpipe/results/d/7/2/f/1110112/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431208 /lustre/scratch105/vrpipe/results/8/9/2/2/1110106/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431201 /lustre/scratch105/vrpipe/results/1/c/8/1/1110096/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431187 /lustre/scratch105/vrpipe/results/9/2/c/c/1110113/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431209 /lustre/scratch105/vrpipe/results/c/4/4/5/1110103/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431197 /lustre/scratch105/vrpipe/results/8/5/9/0/1110133/4_bam_mark_duplicates/pe.1.markdup.bam SC_GCIM5431230