/lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617794/SLX/18679373/22036_8#1/1803096.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617795/SLX/18679385/22036_8#2/1803141.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617798/SLX/18679421/22036_8#3/1802631.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617799/SLX/18679433/22036_8#4/1802685.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617800/SLX/18679445/22036_8#5/1802502.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617801/SLX/18679457/22036_8#6/1802553.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617802/SLX/18679374/22036_8#7/1802715.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617806/SLX/18679410/22036_8#8/1802556.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617807/SLX/18679422/22036_8#9/1802574.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617808/SLX/18679434/22036_8#10/1802547.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617809/SLX/18679446/22036_8#11/1802538.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617810/SLX/18679458/22036_8#12/1802724.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617811/SLX/18679375/22036_8#13/1802655.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617812/SLX/18679387/22036_8#14/1802652.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617813/SLX/18679399/22036_8#15/1802583.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617814/SLX/18679411/22036_8#16/1802679.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617815/SLX/18679423/22036_8#17/1802613.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617816/SLX/18679435/22036_8#18/1802667.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617817/SLX/18679447/22036_8#19/1802598.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617818/SLX/18679459/22036_8#20/1802646.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617819/SLX/18679376/22036_8#21/1802577.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617820/SLX/18679388/22036_8#22/1802541.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617821/SLX/18679400/22036_8#23/1802712.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617822/SLX/18679412/22036_8#24/1802604.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617823/SLX/18679424/22036_8#25/1802658.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617824/SLX/18679436/22036_8#26/1802706.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617825/SLX/18679448/22036_8#27/1802517.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617828/SLX/18679389/22036_8#28/1802520.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617829/SLX/18679401/22036_8#29/1802622.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617830/SLX/18679413/22036_8#30/1802661.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617831/SLX/18679425/22036_8#31/1802607.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617832/SLX/18679437/22036_8#32/1802562.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617833/SLX/18679449/22036_8#33/1802700.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617835/SLX/18679461/22036_8#34/1802628.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617836/SLX/18679378/22036_8#35/1802601.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617837/SLX/18679390/22036_8#36/1802514.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617838/SLX/18679402/22036_8#37/1802565.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617839/SLX/18679414/22036_8#38/1802718.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617841/SLX/18679438/22036_8#39/1802691.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617843/SLX/18679462/22036_8#40/1802529.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617844/SLX/18679379/22036_8#41/1802580.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617845/SLX/18679391/22036_8#42/1802634.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617846/SLX/18679403/22036_8#43/1802544.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617847/SLX/18679415/22036_8#44/1802610.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617848/SLX/18679427/22036_8#45/1802682.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617850/SLX/18679451/22036_8#46/1802508.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617851/SLX/18679463/22036_8#47/1802664.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617852/SLX/18679380/22036_8#48/1802697.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617853/SLX/18679392/22036_8#49/1802676.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617854/SLX/18679404/22036_8#50/1802592.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617855/SLX/18679416/22036_8#51/1802532.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617856/SLX/18679428/22036_8#52/1802730.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617857/SLX/18679440/22036_8#53/1802550.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617858/SLX/18679452/22036_8#54/1802559.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617859/SLX/18679464/22036_8#55/1802505.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617860/SLX/18679381/22036_8#56/1802688.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617861/SLX/18679393/22036_8#57/1802637.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617862/SLX/18679405/22036_8#58/1802523.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617863/SLX/18679417/22036_8#59/1802709.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617864/SLX/18679429/22036_8#60/1802586.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617865/SLX/18679441/22036_8#61/1802640.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617866/SLX/18679453/22036_8#62/1802595.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617867/SLX/18679465/22036_8#63/1802673.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617868/SLX/18679382/22036_8#64/1802616.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617869/SLX/18679394/22036_8#65/1802571.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617870/SLX/18679406/22036_8#66/1802511.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617871/SLX/18679418/22036_8#67/1802694.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617872/SLX/18679430/22036_8#68/1802643.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617873/SLX/18679442/22036_8#69/1802589.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617874/SLX/18679454/22036_8#70/1802499.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617875/SLX/18679466/22036_8#71/1802490.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617876/SLX/18679383/22036_8#72/1802475.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617877/SLX/18679395/22036_8#73/1802460.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617878/SLX/18679407/22036_8#74/1802487.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617879/SLX/18679419/22036_8#75/1802472.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617881/SLX/18679431/22036_8#76/1802478.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617882/SLX/18679443/22036_8#77/1802466.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617883/SLX/18679455/22036_8#78/1802493.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617884/SLX/18679467/22036_8#79/1802484.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617885/SLX/18679384/22036_8#80/1802469.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617886/SLX/18679396/22036_8#81/1802481.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617887/SLX/18679408/22036_8#82/1803414.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617888/SLX/18679420/22036_8#83/1802496.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Escherichia/coli/TRACKING/4464/4464STDY6617889/SLX/18679432/22036_8#84/1802463.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617509/SLX/18701153/22072_1#94/1803474.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617510/SLX/18701165/22072_1#95/1803429.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617511/SLX/18701177/22072_1#96/1803342.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617512/SLX/18701189/22072_1#97/1803411.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617513/SLX/18701201/22072_1#98/1803468.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617514/SLX/18701213/22072_1#99/1803249.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617516/SLX/18701237/22072_1#100/1803405.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617517/SLX/18701154/22072_1#101/1803354.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617518/SLX/18701166/22072_1#102/1803276.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617519/SLX/18701178/22072_1#103/1803441.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617520/SLX/18701190/22072_1#104/1803372.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617521/SLX/18701202/22072_1#105/1803321.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617522/SLX/18701214/22072_1#106/1803231.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617523/SLX/18701226/22072_1#107/1803285.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617524/SLX/18701238/22072_1#108/1803480.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617525/SLX/18701155/22072_1#109/1803438.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617526/SLX/18701167/22072_1#110/1803498.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617527/SLX/18701179/22072_1#111/1803456.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617528/SLX/18701191/22072_1#112/1803381.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617529/SLX/18701203/22072_1#113/1803426.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617530/SLX/18701215/22072_1#114/1803333.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617531/SLX/18701227/22072_1#115/1803495.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617532/SLX/18701239/22072_1#116/1803423.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617533/SLX/18701156/22072_1#117/1803294.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617534/SLX/18701168/22072_1#118/1803225.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617535/SLX/18701180/22072_1#119/1803330.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617537/SLX/18701192/22072_1#120/1803387.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617538/SLX/18701204/22072_1#121/1803345.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617539/SLX/18701216/22072_1#122/1803255.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617540/SLX/18701228/22072_1#123/1803369.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617541/SLX/18701240/22072_1#124/1803300.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617542/SLX/18701157/22072_1#125/1803234.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617543/SLX/18701169/22072_1#126/1803465.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617544/SLX/18701181/22072_1#127/1803390.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617545/SLX/18701193/22072_1#128/1803327.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617546/SLX/18701205/22072_1#129/1803270.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617547/SLX/18701217/22072_1#130/1803450.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617549/SLX/18701241/22072_1#131/1803486.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617552/SLX/18701182/22072_1#132/1803402.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617553/SLX/18701194/22072_1#133/1803306.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617554/SLX/18701206/22072_1#134/1803273.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617555/SLX/18701218/22072_1#135/1803315.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617557/SLX/18701242/22072_1#136/1803228.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617558/SLX/18701159/22072_1#137/1803264.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617559/SLX/18701171/22072_1#138/1803378.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617560/SLX/18701183/22072_1#139/1803417.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617564/SLX/18701231/22072_1#140/1803447.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617565/SLX/18701243/22072_1#141/1803420.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617566/SLX/18701160/22072_1#142/1803348.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617568/SLX/18701184/22072_1#143/1803261.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617569/SLX/18701196/22072_1#144/1803384.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617571/SLX/18701220/22072_1#145/1803318.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617572/SLX/18701232/22072_1#146/1803252.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617574/SLX/18701161/22072_1#147/1803303.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617575/SLX/18701173/22072_1#148/1803279.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617576/SLX/18701185/22072_1#149/1803489.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617577/SLX/18701197/22072_1#150/1803351.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617578/SLX/18701209/22072_1#151/1803363.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617580/SLX/18701233/22072_1#152/1803297.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617581/SLX/18701245/22072_1#153/1803492.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617584/SLX/18701186/22072_1#154/1803393.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617585/SLX/18701198/22072_1#155/1803339.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617587/SLX/18701222/22072_1#156/1803237.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617590/SLX/18701163/22072_1#157/1803453.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617591/SLX/18701175/22072_1#158/1803366.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617592/SLX/18701187/22072_1#159/1803444.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617593/SLX/18701199/22072_1#160/1803291.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617594/SLX/18701211/22072_1#161/1803408.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617595/SLX/18701223/22072_1#162/1803477.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617596/SLX/18701235/22072_1#163/1803396.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617597/SLX/18701247/22072_1#164/1803243.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617598/SLX/18701164/22072_1#165/1803312.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617599/SLX/18701176/22072_1#166/1803375.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617600/SLX/18701188/22072_1#167/1803432.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617601/SLX/18701200/22072_1#168/1803282.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617602/SLX/18701212/22072_1#169/1803357.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617603/SLX/18701224/22072_1#170/1803483.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617684/SLX/18713207/22072_1#237/1803267.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617685/SLX/18713219/22072_1#238/1803324.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617686/SLX/18713231/22072_1#239/1803462.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617687/SLX/18713243/22072_1#240/1803240.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617688/SLX/18713255/22072_1#241/1803435.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617689/SLX/18713267/22072_1#242/1803471.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617690/SLX/18713279/22072_1#243/1803309.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617691/SLX/18713291/22072_1#244/1803360.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617692/SLX/18713208/22072_1#245/1803288.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617693/SLX/18713220/22072_1#246/1803246.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617694/SLX/18713232/22072_1#247/1803459.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617695/SLX/18713244/22072_1#248/1803399.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617696/SLX/18713256/22072_1#249/1803336.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Klebsiella/pneumoniae/TRACKING/4464/4464STDY6617698/SLX/18713294/22072_1#250/1803258.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617699/SLX/18713306/22072_1#251/1802727.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/fluorescens/TRACKING/4464/4464STDY6617701/SLX/18713330/22072_1#252/1802772.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617702/SLX/18713342/22072_1#253/1802790.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617703/SLX/18713354/22072_1#254/1802859.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617704/SLX/18713366/22072_1#255/1802916.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617705/SLX/18713378/22072_1#256/1802811.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617706/SLX/18713295/22072_1#257/1802871.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617707/SLX/18713307/22072_1#258/1802835.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617708/SLX/18713319/22072_1#259/1802889.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617709/SLX/18713331/22072_1#260/1802901.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617710/SLX/18713343/22072_1#261/1802946.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617711/SLX/18713355/22072_1#262/1802781.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617712/SLX/18713367/22072_1#263/1802862.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617713/SLX/18713379/22072_1#264/1802934.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617714/SLX/18713296/22072_1#265/1802961.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617715/SLX/18713308/22072_1#266/1802796.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617716/SLX/18713320/22072_1#267/1802880.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617717/SLX/18713332/22072_1#268/1802949.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617718/SLX/18713344/22072_1#269/1802973.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617719/SLX/18713356/22072_1#270/1802865.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617720/SLX/18713368/22072_1#271/1802886.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617721/SLX/18713380/22072_1#272/1802940.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617722/SLX/18713297/22072_1#273/1802802.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617723/SLX/18713309/22072_1#274/1802910.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617724/SLX/18713321/22072_1#275/1802919.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617725/SLX/18713333/22072_1#276/1802967.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617726/SLX/18713345/22072_1#277/1802829.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617727/SLX/18713357/22072_1#278/1802883.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617728/SLX/18713369/22072_1#279/1802955.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617729/SLX/18713381/22072_1#280/1802907.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617730/SLX/18713298/22072_1#281/1802853.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617731/SLX/18713310/22072_1#282/1802814.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617732/SLX/18713322/22072_1#283/1802895.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617733/SLX/18713334/22072_1#284/1802943.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617734/SLX/18713346/22072_1#285/1802787.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617735/SLX/18713358/22072_1#286/1802850.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617736/SLX/18713370/22072_1#287/1802841.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617737/SLX/18713382/22072_1#288/1802928.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617738/SLX/18713299/22072_1#289/1802970.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617739/SLX/18713311/22072_1#290/1802931.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617740/SLX/18713323/22072_1#291/1802823.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617741/SLX/18713335/22072_1#292/1802808.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617742/SLX/18713347/22072_1#293/1802904.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617743/SLX/18713359/22072_1#294/1802838.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617744/SLX/18713371/22072_1#295/1802844.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617745/SLX/18713383/22072_1#296/1802805.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617746/SLX/18713300/22072_1#297/1802892.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617747/SLX/18713312/22072_1#298/1802868.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617748/SLX/18713324/22072_1#299/1802793.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617749/SLX/18713336/22072_1#300/1802976.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617750/SLX/18713348/22072_1#301/1802832.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617751/SLX/18713360/22072_1#302/1802778.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617752/SLX/18713372/22072_1#303/1802937.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617753/SLX/18713384/22072_1#304/1802898.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617754/SLX/18713301/22072_1#305/1802847.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617755/SLX/18713313/22072_1#306/1802799.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617756/SLX/18713325/22072_1#307/1802982.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617757/SLX/18713337/22072_1#308/1802826.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617758/SLX/18713349/22072_1#309/1802775.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617759/SLX/18713361/22072_1#310/1802964.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617760/SLX/18713373/22072_1#311/1802913.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617761/SLX/18713385/22072_1#312/1802817.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617762/SLX/18713302/22072_1#313/1802784.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617763/SLX/18713314/22072_1#314/1802952.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617764/SLX/18713326/22072_1#315/1802877.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617765/SLX/18713338/22072_1#316/1802820.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617767/SLX/18713350/22072_1#317/1802979.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617768/SLX/18713362/22072_1#318/1802925.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617769/SLX/18713374/22072_1#319/1802874.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617770/SLX/18713386/22072_1#320/1802856.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617771/SLX/18713303/22072_1#321/1802922.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Pseudomonas/aeruginosa/TRACKING/4464/4464STDY6617772/SLX/18713315/22072_1#322/1802958.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617776/SLX/18713363/22072_1#325/1802619.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617777/SLX/18713375/22072_1#326/1802721.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617778/SLX/18713387/22072_1#327/1802535.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617779/SLX/18713304/22072_1#328/1802649.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617780/SLX/18713316/22072_1#329/1802703.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617781/SLX/18713328/22072_1#330/1802568.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617782/SLX/18713340/22072_1#331/1802526.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617783/SLX/18713352/22072_1#332/1802670.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterobacter/cloacae/TRACKING/4464/4464STDY6617784/SLX/18713364/22072_1#333/1802625.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617785/SLX/18713376/22072_1#334/1803153.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617786/SLX/18713388/22072_1#335/1803186.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617787/SLX/18713305/22072_1#336/1803216.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617788/SLX/18713317/22072_1#337/1803183.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617789/SLX/18713329/22072_1#338/1803090.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617790/SLX/18713341/22072_1#339/1803201.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617791/SLX/18713353/22072_1#340/1803204.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617792/SLX/18713365/22072_1#341/1803144.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617893/SLX/18796410/22204_7#3/1803051.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617894/SLX/18796422/22204_7#4/1803024.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617895/SLX/18796434/22204_7#5/1803027.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617896/SLX/18796446/22204_7#6/1803000.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617897/SLX/18796458/22204_7#7/1803084.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617898/SLX/18796470/22204_7#8/1803054.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617899/SLX/18796387/22204_7#9/1803009.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617900/SLX/18796399/22204_7#10/1803069.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617901/SLX/18796411/22204_7#11/1802991.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617902/SLX/18796423/22204_7#12/1803018.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617903/SLX/18796435/22204_7#13/1803042.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617904/SLX/18796447/22204_7#14/1803066.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617905/SLX/18796459/22204_7#15/1802985.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617906/SLX/18796471/22204_7#16/1803015.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617907/SLX/18796388/22204_7#17/1803036.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617908/SLX/18796400/22204_7#18/1803060.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617909/SLX/18796412/22204_7#19/1803072.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617910/SLX/18796424/22204_7#20/1803048.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617911/SLX/18796436/22204_7#21/1803030.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617912/SLX/18796448/22204_7#22/1802997.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617913/SLX/18796460/22204_7#23/1802994.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617914/SLX/18796472/22204_7#24/1803078.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617915/SLX/18796389/22204_7#25/1803045.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617916/SLX/18796401/22204_7#26/1803006.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617917/SLX/18796413/22204_7#27/1803003.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617918/SLX/18796425/22204_7#28/1803075.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617919/SLX/18796437/22204_7#29/1803063.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617920/SLX/18796449/22204_7#30/1802988.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617921/SLX/18796461/22204_7#31/1803021.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617922/SLX/18796473/22204_7#32/1803039.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617923/SLX/18796390/22204_7#33/1803033.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617925/SLX/18796402/22204_7#34/1803057.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617926/SLX/18796414/22204_7#35/1803081.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecalis/TRACKING/4464/4464STDY6617927/SLX/18796426/22204_7#36/1803012.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617928/SLX/18796438/22204_7#37/1803135.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617929/SLX/18796450/22204_7#38/1803162.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617930/SLX/18796462/22204_7#39/1803219.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617931/SLX/18796474/22204_7#40/1803147.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617932/SLX/18796391/22204_7#41/1803126.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617933/SLX/18796403/22204_7#42/1803093.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617934/SLX/18796415/22204_7#43/1803207.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617935/SLX/18796427/22204_7#44/1803165.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617936/SLX/18796439/22204_7#45/1803150.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617937/SLX/18796451/22204_7#46/1803114.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617938/SLX/18796463/22204_7#47/1803210.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617939/SLX/18796475/22204_7#48/1803177.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617940/SLX/18796392/22204_7#49/1803174.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617941/SLX/18796404/22204_7#50/1803189.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617942/SLX/18796416/22204_7#51/1803108.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617943/SLX/18796428/22204_7#52/1803156.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617944/SLX/18796440/22204_7#53/1803198.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617945/SLX/18796452/22204_7#54/1803168.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617946/SLX/18796464/22204_7#55/1803120.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617947/SLX/18796476/22204_7#56/1803111.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617948/SLX/18796393/22204_7#57/1803105.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617949/SLX/18796405/22204_7#58/1803213.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617950/SLX/18796417/22204_7#59/1803132.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617951/SLX/18796429/22204_7#60/1803099.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617952/SLX/18796441/22204_7#61/1803222.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617953/SLX/18796453/22204_7#62/1803180.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617954/SLX/18796465/22204_7#63/1803138.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617955/SLX/18796477/22204_7#64/1803102.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617956/SLX/18796394/22204_7#65/1803171.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617957/SLX/18796406/22204_7#66/1803129.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617958/SLX/18796418/22204_7#67/1803087.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617959/SLX/18796430/22204_7#68/1803195.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617960/SLX/18796442/22204_7#69/1803117.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617961/SLX/18796454/22204_7#70/1803192.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617962/SLX/18796466/22204_7#71/1803159.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Enterococcus/faecium/TRACKING/4464/4464STDY6617963/SLX/18796478/22204_7#72/1803123.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Shigella/boydii/TRACKING/4464/4464STDY6617964/SLX/18796395/22204_7#73/1802766.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Shigella/boydii/TRACKING/4464/4464STDY6617965/SLX/18796407/22204_7#74/1802763.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Shigella/boydii/TRACKING/4464/4464STDY6617966/SLX/18796419/22204_7#75/1802760.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Shigella/boydii/TRACKING/4464/4464STDY6617967/SLX/18796431/22204_7#76/1802769.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Shigella/dysenteriae/TRACKING/4464/4464STDY6617968/SLX/18796443/22204_7#77/1802757.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Shigella/flexneri/TRACKING/4464/4464STDY6617969/SLX/18796455/22204_7#78/1802748.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Shigella/flexneri/TRACKING/4464/4464STDY6617970/SLX/18796467/22204_7#79/1802742.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Shigella/flexneri/TRACKING/4464/4464STDY6617971/SLX/18796479/22204_7#80/1802745.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Shigella/flexneri/TRACKING/4464/4464STDY6617972/SLX/18796396/22204_7#81/1802754.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Shigella/flexneri/TRACKING/4464/4464STDY6617973/SLX/18796408/22204_7#82/1802751.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Neisseria/meningitidis/TRACKING/4464/4464STDY6617976/SLX/18796444/22204_7#85/1802739.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Neisseria/meningitidis/TRACKING/4464/4464STDY6617977/SLX/18796456/22204_7#86/1802736.pe.markdup.bam /lustre/scratch118/infgen/pathogen/pathpipe/prokaryotes/seq-pipelines/Neisseria/meningitidis/TRACKING/4464/4464STDY6617978/SLX/18796468/22204_7#87/1802733.pe.markdup.bam