Index of /pub/users/ac19/Home_files/Lustre_Backup/Kleb_Ent_MiSeq_run/Klebseilla_mapping
Name Last modified Size Description
![[PARENTDIR]](/icons/back.gif)
Parent Directory -
![[ ]](/icons/unknown.gif)
10210_1#3_1.fastq 2020-09-28 14:53 0
10210_1#3_1.notag.fastq 2020-09-28 14:53 0
10210_1#3_1.notag.fastq.mapped 2020-09-28 14:53 0
10210_1#3_1.notag.fastq.mapped.bam 2020-09-28 14:53 0
10210_1#3_1.notag.fastq.mapped.bam.sort.bam 2020-09-28 14:53 0
![[ ]](/icons/compressed.gif)
10210_1#3_1.notag.fastq.mapped.bam.sort.bam.HF536482.insert_site_plot.gz 2020-09-28 14:53 0
10210_1#3_1.notag.fastq.mapped.bam.sort.bam.HF536483.insert_site_plot.gz 2020-09-28 14:53 0
10210_1#3_1.notag.fastq.mapped.bam.sort.bam.bamcheck 2020-09-28 14:53 0
10210_1#3_1.notag.fastq.mapped.bam.sort.bam.corrected.bam 2020-09-28 14:53 0
10210_1#3_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai 2020-09-28 14:53 0
![[TXT]](/icons/text.gif)
10210_1#3_1.notag.fastq.mapped.bam.sort.bam.insertion.csv 2020-09-28 14:53 0
10210_1#3_1.out.HF536482.insert_site_plot.gz 2020-09-28 14:53 0
10210_1#3_1.out.HF536483.insert_site_plot.gz 2020-09-28 14:53 0
10210_1#3_1.out.mapped.bam 2020-09-28 14:53 0
10210_1#3_1.out.mapped.bam.bai 2020-09-28 14:53 0
10210_1#3_1.tag.fastq 2020-09-28 14:53 0
10210_1#4_1.fastq 2020-09-28 14:53 0
10210_1#4_1.notag.fastq 2020-09-28 14:53 0
10210_1#4_1.notag.fastq.mapped 2020-09-28 14:53 0
10210_1#4_1.notag.fastq.mapped.bam 2020-09-28 14:53 0
10210_1#4_1.notag.fastq.mapped.bam.sort.bam 2020-09-28 14:53 0
10210_1#4_1.notag.fastq.mapped.bam.sort.bam.HF536482.insert_site_plot.gz 2020-09-28 14:53 0
10210_1#4_1.notag.fastq.mapped.bam.sort.bam.HF536483.insert_site_plot.gz 2020-09-28 14:53 0
10210_1#4_1.notag.fastq.mapped.bam.sort.bam.bamcheck 2020-09-28 14:53 0
10210_1#4_1.notag.fastq.mapped.bam.sort.bam.corrected.bam 2020-09-28 14:53 0
10210_1#4_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai 2020-09-28 14:53 0
10210_1#4_1.notag.fastq.mapped.bam.sort.bam.insertion.csv 2020-09-28 14:53 0
10210_1#4_1.out.HF536482.insert_site_plot.gz 2020-09-28 14:53 0
10210_1#4_1.out.HF536483.insert_site_plot.gz 2020-09-28 14:53 0
10210_1#4_1.out.mapped.bam 2020-09-28 14:53 0
10210_1#4_1.out.mapped.bam.bai 2020-09-28 14:53 0
10210_1#4_1.tag.fastq 2020-09-28 14:53 0
10210_1#7_1.fastq 2020-09-28 14:53 0
10210_1#7_1.notag.fastq 2020-09-28 14:53 0
10210_1#7_1.notag.fastq.mapped 2020-09-28 14:53 0
10210_1#7_1.notag.fastq.mapped.bam 2020-09-28 14:53 0
10210_1#7_1.notag.fastq.mapped.bam.sort.bam 2020-09-28 14:53 0
10210_1#7_1.notag.fastq.mapped.bam.sort.bam.bamcheck 2020-09-28 14:53 0
10210_1#7_1.notag.fastq.mapped.bam.sort.bam.corrected.bam 2020-09-28 14:53 0
10210_1#7_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai 2020-09-28 14:53 0
10210_1#7_1.out.HF536482.insert_site_plot.gz 2020-09-28 14:53 0
10210_1#7_1.out.HF536483.insert_site_plot.gz 2020-09-28 14:53 0
10210_1#7_1.out.mapped.bam 2020-09-28 14:53 0
10210_1#7_1.out.mapped.bam.bai 2020-09-28 14:53 0
10210_1#7_1.tag.fastq 2020-09-28 14:53 0
10210_1#8_1.fastq 2020-09-28 14:53 0
10210_1#8_1.notag.fastq 2020-09-28 14:53 0
10210_1#8_1.notag.fastq.mapped 2020-09-28 14:53 0
10210_1#8_1.notag.fastq.mapped.bam 2020-09-28 14:53 0
10210_1#8_1.notag.fastq.mapped.bam.sort.bam 2020-09-28 14:53 0
10210_1#8_1.notag.fastq.mapped.bam.sort.bam.bamcheck 2020-09-28 14:53 0
10210_1#8_1.notag.fastq.mapped.bam.sort.bam.corrected.bam 2020-09-28 14:53 0
10210_1#8_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai 2020-09-28 14:53 0
10210_1#8_1.out.HF536482.insert_site_plot.gz 2020-09-28 14:53 0
10210_1#8_1.out.HF536483.insert_site_plot.gz 2020-09-28 14:53 0
10210_1#8_1.out.mapped.bam 2020-09-28 14:53 0
10210_1#8_1.out.mapped.bam.bai 2020-09-28 14:53 0
10210_1#8_1.tag.fastq 2020-09-28 14:53 0
Kleb_fastq_list.stats 2020-09-28 14:53 0
Kleb_fastq_list.txt 2020-09-28 14:53 0
Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_HF536482_v1.1.embl 2020-09-28 14:53 0
Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_HF536482_v1.1.gff 2020-09-28 14:53 0
Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_v1.1.fa 2020-09-28 14:53 0
Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_v1.1.index.sma 2020-09-28 14:53 0
Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_v1.1.index.smi 2020-09-28 14:53 0
TraDIS_plot_summary.pl 2020-09-28 14:53 0
bamcheck.sh 2020-09-28 14:53 53
checkSAM.py 2020-09-28 14:53 0
checkSAM.sh 2020-09-28 14:53 55
convertSmalt.e 2020-09-28 14:53 0
convertSmalt.o 2020-09-28 14:53 0
convertSmalt.sh 2020-09-28 14:53 0
filterFastQ.e 2020-09-28 14:53 0
filterFastQ.o 2020-09-28 14:53 0
filterFastQ.py 2020-09-28 14:53 0
filterFastQ.sh 2020-09-28 14:53 61
filterFastQ2.e 2020-09-28 14:53 0
filterFastQ2.o 2020-09-28 14:53 0
filterFastQ3.e 2020-09-28 14:53 0
filterFastQ3.o 2020-09-28 14:53 0
job_na2me.o 2020-09-28 14:53 0
job_nam2e.e 2020-09-28 14:53 0
job_name.e 2020-09-28 14:53 56
job_name.o 2020-09-28 14:53 0
out.e 2020-09-28 14:53 0
out.o 2020-09-28 14:53 0
output_test1.e 2020-09-28 14:53 54
output_test1.o 2020-09-28 14:53 0
removeTag.e 2020-09-28 14:53 0
removeTag.o 2020-09-28 14:53 0
removeTag.py 2020-09-28 14:53 0
removeTag.sh 2020-09-28 14:53 63
runPicard.py 2020-09-28 14:53 0
runSmalt.e 2020-09-28 14:53 0
runSmalt.o 2020-09-28 14:53 0
runSmalt.sh 2020-09-28 14:53 0
runTradis.e 2020-09-28 14:53 0
runTradis.o 2020-09-28 14:53 0
runTradis.sh 2020-09-28 14:53 0
runTradis2.e 2020-09-28 14:53 0
runTradis2.o 2020-09-28 14:53 0
sortBAM.sh 2020-09-28 14:53 0
sortbam.e 2020-09-28 14:53 0
sortbam.o 2020-09-28 14:53 0