Index of /pub/users/ac19/Kleb_Ent_MiSeq_run/Enterobacter_mapping

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]*.sort.bam.bamcheck2020-09-28 14:03 0  
[ ]*.sort.bam.corrected.bam2020-09-28 15:09 34  
[ ]*.sort.bam.corrected.bam.bai2020-09-28 15:09 16  
[TXT]*.sort.bam.insertion.csv2020-09-28 15:09 203K 
[ ]10210_1#5_1.fastq2020-09-28 15:09 139M 
[ ]10210_1#5_1.notag.fastq2020-09-28 15:09 118M 
[ ]10210_1#5_1.notag.fastq.mapped2020-09-28 15:09 200M 
[ ]10210_1#5_1.notag.fastq.mapped.bam2020-09-28 15:09 49M 
[ ]10210_1#5_1.notag.fastq.mapped.bam.sort.bam2020-09-28 15:09 37M 
[ ]10210_1#5_1.notag.fastq.mapped.bam.sort.bam.bamcheck2020-09-28 15:09 26K 
[ ]10210_1#5_1.notag.fastq.mapped.bam.sort.bam.corrected.bam2020-09-28 15:09 34M 
[ ]10210_1#5_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.Enterobacter_cloacae_subsp_cloacae_NCTC_9394_v1.fa.insert_site_plot.gz2020-09-28 15:09 744K 
[ ]10210_1#5_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai2020-09-28 15:09 14K 
[ ]10210_1#5_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.corrected.bam2020-09-28 15:09 34M 
[ ]10210_1#5_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.corrected.bam.bai2020-09-28 15:09 14K 
[TXT]10210_1#5_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.insertion.csv2020-09-28 15:09 203K 
[TXT]10210_1#5_1.notag.fastq.mapped.bam.sort.bam.insertion.csv2020-09-28 15:09 203K 
[ ]10210_1#5_1.out.Enterobacter_cloacae_subsp_cloacae_NCTC_9394_v1.fa.insert_site_plot.gz2020-09-28 15:09 752K 
[ ]10210_1#5_1.out.mapped.bam2020-09-28 15:09 37M 
[ ]10210_1#5_1.out.mapped.bam.bai2020-09-28 15:09 14K 
[TXT]10210_1#5_1.tag.fastq2020-09-28 15:09 138M 
[ ]10210_1#6_1.fastq2020-09-28 15:09 113M 
[ ]10210_1#6_1.notag.fastq2020-09-28 15:09 96M 
[ ]10210_1#6_1.notag.fastq.mapped2020-09-28 15:09 162M 
[ ]10210_1#6_1.notag.fastq.mapped.bam2020-09-28 15:09 40M 
[ ]10210_1#6_1.notag.fastq.mapped.bam.sort.bam2020-09-28 15:09 31M 
[ ]10210_1#6_1.notag.fastq.mapped.bam.sort.bam.bamcheck2020-09-28 15:09 25K 
[ ]10210_1#6_1.notag.fastq.mapped.bam.sort.bam.corrected.bam2020-09-28 15:09 18M 
[ ]10210_1#6_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.Enterobacter_cloacae_subsp_cloacae_NCTC_9394_v1.fa.insert_site_plot.gz2020-09-28 15:09 439K 
[ ]10210_1#6_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.corrected.bam2020-09-28 15:09 18M 
[ ]10210_1#6_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.corrected.bam.bai2020-09-28 15:09 8.9K 
[TXT]10210_1#6_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.insertion.csv2020-09-28 15:09 203K 
[ ]10210_1#6_1.out.Enterobacter_cloacae_subsp_cloacae_NCTC_9394_v1.fa.insert_site_plot.gz2020-09-28 15:09 678K 
[ ]10210_1#6_1.out.mapped.bam2020-09-28 15:09 31M 
[ ]10210_1#6_1.out.mapped.bam.bai2020-09-28 15:09 14K 
[TXT]10210_1#6_1.tag.fastq2020-09-28 15:09 112M 
[ ]10210_1#9_1.fastq2020-09-28 15:09 121M 
[ ]10210_1#9_1.notag.fastq2020-09-28 15:09 102M 
[ ]10210_1#9_1.notag.fastq.mapped2020-09-28 15:09 171M 
[ ]10210_1#9_1.notag.fastq.mapped.bam2020-09-28 15:09 38M 
[ ]10210_1#9_1.notag.fastq.mapped.bam.sort.bam2020-09-28 15:09 27M 
[ ]10210_1#9_1.notag.fastq.mapped.bam.sort.bam.bamcheck2020-09-28 15:09 25K 
[ ]10210_1#9_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.corrected.bam2020-09-28 15:09 34  
[ ]10210_1#9_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.corrected.bam.bai2020-09-28 15:09 16  
[TXT]10210_1#9_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.insertion.csv2020-09-28 15:09 203K 
[ ]10210_1#9_1.out.Enterobacter_cloacae_subsp_cloacae_NCTC_9394_v1.fa.insert_site_plot.gz2020-09-28 15:09 681K 
[ ]10210_1#9_1.out.mapped.bam2020-09-28 15:09 27M 
[ ]10210_1#9_1.out.mapped.bam.bai2020-09-28 15:09 13K 
[TXT]10210_1#9_1.tag.fastq2020-09-28 15:09 119M 
[ ]10210_1#10_1.fastq2020-09-28 15:09 133M 
[ ]10210_1#10_1.notag.fastq2020-09-28 15:09 113M 
[ ]10210_1#10_1.notag.fastq.mapped2020-09-28 15:09 190M 
[ ]10210_1#10_1.notag.fastq.mapped.bam2020-09-28 15:09 42M 
[ ]10210_1#10_1.notag.fastq.mapped.bam.sort.bam2020-09-28 15:09 26M 
[ ]10210_1#10_1.notag.fastq.mapped.bam.sort.bam.Enterobacter_cloacae_subsp_cloacae_NCTC_9394_v1.fa.insert_site_plot.gz2020-09-28 15:09 688K 
[ ]10210_1#10_1.notag.fastq.mapped.bam.sort.bam.bamcheck2020-09-28 15:09 26K 
[ ]10210_1#10_1.notag.fastq.mapped.bam.sort.bam.corrected.bam2020-09-28 15:09 26M 
[ ]10210_1#10_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai2020-09-28 15:09 13K 
[TXT]10210_1#10_1.notag.fastq.mapped.bam.sort.bam.insertion.csv2020-09-28 15:09 203K 
[ ]10210_1#10_1.out.Enterobacter_cloacae_subsp_cloacae_NCTC_9394_v1.fa.insert_site_plot.gz2020-09-28 15:09 706K 
[ ]10210_1#10_1.out.mapped.bam2020-09-28 15:09 29M 
[ ]10210_1#10_1.out.mapped.bam.bai2020-09-28 15:09 13K 
[TXT]10210_1#10_1.tag.fastq2020-09-28 15:09 131M 
[ ]Ent_fastq_list.stats2020-09-28 15:09 752  
[TXT]Ent_fastq_list.txt2020-09-28 15:09 74  
[ ]Ent_fastq_list2.stats2020-09-28 15:09 380  
[TXT]Ent_fastq_list2.txt2020-09-28 15:09 18  
[ ]Enterobacter_cloacae_subsp_cloacae_NCTC_9394_v1.embl2020-09-28 15:09 9.7M 
[ ]Enterobacter_cloacae_subsp_cloacae_NCTC_9394_v1.fa2020-09-28 15:09 4.8M 
[ ]Enterobacter_cloacae_subsp_cloacae_NCTC_9394_v1.gff2020-09-28 15:09 7.0M 
[ ]Enterobacter_cloacae_subsp_cloacae_NCTC_9394_v1.index.sma2020-09-28 15:09 1.9M 
[ ]Enterobacter_cloacae_subsp_cloacae_NCTC_9394_v1.index.smi2020-09-28 15:09 17M 
[TXT]TraDIS_plot_summary.pl2020-09-28 15:09 2.5K 
[ ]bamcheck.e2020-09-28 15:09 258  
[ ]bamcheck.o2020-09-28 15:09 7.2K 
[TXT]bamcheck.sh2020-09-28 15:09 53  
[TXT]checkSAM.py2020-09-28 15:09 619  
[TXT]checkSAM.sh2020-09-28 15:09 55  
[ ]convertSmalt.e2020-09-28 15:09 552  
[ ]convertSmalt.o2020-09-28 15:09 3.5K 
[TXT]convertSmalt.sh2020-09-28 15:09 69  
[ ]filterFastQ.e2020-09-28 14:03 0  
[ ]filterFastQ.o2020-09-28 15:09 2.1K 
[TXT]filterFastQ.py2020-09-28 15:09 741  
[TXT]filterFastQ.sh2020-09-28 15:09 61  
[ ]job_name.e2020-09-28 14:03 0  
[ ]job_name.o2020-09-28 15:09 1.0K 
[ ]output_test1.e2020-09-28 15:09 7.7K 
[ ]output_test1.o2020-09-28 15:09 3.1K 
[ ]removeTag.e2020-09-28 14:03 0  
[ ]removeTag.o2020-09-28 15:09 3.1K 
[TXT]removeTag.py2020-09-28 15:09 650  
[TXT]removeTag.sh2020-09-28 15:09 63  
[TXT]runPicard.py2020-09-28 15:09 612  
[ ]runSmalt.e2020-09-28 15:09 8.0K 
[ ]runSmalt.o2020-09-28 15:09 5.2K 
[TXT]runSmalt.sh2020-09-28 15:09 127  
[ ]runSmalt2.e2020-09-28 15:09 5.6K 
[ ]runSmalt2.o2020-09-28 15:09 3.2K 
[ ]runTradis.e2020-09-28 15:09 2.5K 
[ ]runTradis.o2020-09-28 15:09 6.4K 
[TXT]runTradis.sh2020-09-28 15:09 188  
[ ]runTradis2.e2020-09-28 15:09 283  
[ ]runTradis2.o2020-09-28 15:09 1.1K 
[TXT]sortBAM.sh2020-09-28 15:09 65  
[ ]sortbam.e2020-09-28 15:09 656  
[ ]sortbam.o2020-09-28 15:09 4.1K 
[ ]sortbam2.e2020-09-28 15:09 41  
[ ]sortbam2.o2020-09-28 15:09 1.1K 
[TXT]tagBAM.py2020-09-28 15:09 1.0K 
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