Index of /pub/users/ac19/Kleb_Ent_MiSeq_run/Klebseilla_mapping
Name
Last modified
Size
Description
Parent Directory
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10210_1#3_1.fastq
2020-09-28 15:10
102M
10210_1#3_1.notag.fastq
2020-09-28 15:10
86M
10210_1#3_1.notag.fastq.mapped
2020-09-28 15:10
14M
10210_1#3_1.notag.fastq.mapped.bam
2020-09-28 15:09
4.3M
10210_1#3_1.notag.fastq.mapped.bam.sort.bam
2020-09-28 15:09
3.6M
10210_1#3_1.notag.fastq.mapped.bam.sort.bam.HF536482.insert_site_plot.gz
2020-09-28 15:09
158K
10210_1#3_1.notag.fastq.mapped.bam.sort.bam.HF536483.insert_site_plot.gz
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11K
10210_1#3_1.notag.fastq.mapped.bam.sort.bam.bamcheck
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16K
10210_1#3_1.notag.fastq.mapped.bam.sort.bam.corrected.bam
2020-09-28 15:10
3.6M
10210_1#3_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai
2020-09-28 15:10
12K
10210_1#3_1.notag.fastq.mapped.bam.sort.bam.insertion.csv
2020-09-28 15:09
555K
10210_1#3_1.out.HF536482.insert_site_plot.gz
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419K
10210_1#3_1.out.HF536483.insert_site_plot.gz
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10210_1#3_1.out.mapped.bam
2020-09-28 15:09
26M
10210_1#3_1.out.mapped.bam.bai
2020-09-28 15:10
14K
10210_1#3_1.tag.fastq
2020-09-28 15:10
101M
10210_1#4_1.fastq
2020-09-28 15:10
132M
10210_1#4_1.notag.fastq
2020-09-28 15:10
75M
10210_1#4_1.notag.fastq.mapped
2020-09-28 15:10
152M
10210_1#4_1.notag.fastq.mapped.bam
2020-09-28 15:10
47M
10210_1#4_1.notag.fastq.mapped.bam.sort.bam
2020-09-28 15:09
33M
10210_1#4_1.notag.fastq.mapped.bam.sort.bam.HF536482.insert_site_plot.gz
2020-09-28 15:09
461K
10210_1#4_1.notag.fastq.mapped.bam.sort.bam.HF536483.insert_site_plot.gz
2020-09-28 15:10
28K
10210_1#4_1.notag.fastq.mapped.bam.sort.bam.bamcheck
2020-09-28 15:09
26K
10210_1#4_1.notag.fastq.mapped.bam.sort.bam.corrected.bam
2020-09-28 15:09
33M
10210_1#4_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai
2020-09-28 15:10
14K
10210_1#4_1.notag.fastq.mapped.bam.sort.bam.insertion.csv
2020-09-28 15:09
570K
10210_1#4_1.out.HF536482.insert_site_plot.gz
2020-09-28 15:10
461K
10210_1#4_1.out.HF536483.insert_site_plot.gz
2020-09-28 15:09
28K
10210_1#4_1.out.mapped.bam
2020-09-28 15:10
33M
10210_1#4_1.out.mapped.bam.bai
2020-09-28 15:10
14K
10210_1#4_1.tag.fastq
2020-09-28 15:10
130M
10210_1#7_1.fastq
2020-09-28 15:09
102M
10210_1#7_1.notag.fastq
2020-09-28 15:10
86M
10210_1#7_1.notag.fastq.mapped
2020-09-28 15:10
117M
10210_1#7_1.notag.fastq.mapped.bam
2020-09-28 15:10
32M
10210_1#7_1.notag.fastq.mapped.bam.sort.bam
2020-09-28 15:09
21M
10210_1#7_1.notag.fastq.mapped.bam.sort.bam.bamcheck
2020-09-28 15:10
24K
10210_1#7_1.notag.fastq.mapped.bam.sort.bam.corrected.bam
2020-09-28 15:10
2.0M
10210_1#7_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai
2020-09-28 15:09
14K
10210_1#7_1.out.HF536482.insert_site_plot.gz
2020-09-28 15:09
415K
10210_1#7_1.out.HF536483.insert_site_plot.gz
2020-09-28 15:10
25K
10210_1#7_1.out.mapped.bam
2020-09-28 15:10
21M
10210_1#7_1.out.mapped.bam.bai
2020-09-28 15:10
14K
10210_1#7_1.tag.fastq
2020-09-28 15:10
101M
10210_1#8_1.fastq
2020-09-28 15:10
132M
10210_1#8_1.notag.fastq
2020-09-28 15:09
28M
10210_1#8_1.notag.fastq.mapped
2020-09-28 15:10
152M
10210_1#8_1.notag.fastq.mapped.bam
2020-09-28 15:10
42M
10210_1#8_1.notag.fastq.mapped.bam.sort.bam
2020-09-28 15:09
26M
10210_1#8_1.notag.fastq.mapped.bam.sort.bam.bamcheck
2020-09-28 15:09
26K
10210_1#8_1.notag.fastq.mapped.bam.sort.bam.corrected.bam
2020-09-28 15:09
16M
10210_1#8_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai
2020-09-28 15:09
14K
10210_1#8_1.out.HF536482.insert_site_plot.gz
2020-09-28 15:10
446K
10210_1#8_1.out.HF536483.insert_site_plot.gz
2020-09-28 15:10
27K
10210_1#8_1.out.mapped.bam
2020-09-28 15:10
26M
10210_1#8_1.out.mapped.bam.bai
2020-09-28 15:10
14K
10210_1#8_1.tag.fastq
2020-09-28 15:10
130M
Kleb_fastq_list.stats
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1.6K
Kleb_fastq_list.txt
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73
Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_HF536482_v1.1.embl
2020-09-28 15:10
11M
Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_HF536482_v1.1.gff
2020-09-28 15:09
7.7M
Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_v1.1.fa
2020-09-28 15:10
5.4M
Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_v1.1.index.sma
2020-09-28 15:10
2.1M
Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_v1.1.index.smi
2020-09-28 15:10
19M
TraDIS_plot_summary.pl
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2.5K
bamcheck.sh
2020-09-28 15:09
53
checkSAM.py
2020-09-28 15:10
619
checkSAM.sh
2020-09-28 15:10
55
convertSmalt.e
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215
convertSmalt.o
2020-09-28 15:10
1.2K
convertSmalt.sh
2020-09-28 15:09
69
filterFastQ.e
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436
filterFastQ.o
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4.2K
filterFastQ.py
2020-09-28 15:10
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filterFastQ.sh
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filterFastQ2.e
2020-09-28 14:03
0
filterFastQ2.o
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filterFastQ3.e
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filterFastQ3.o
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1.0K
job_na2me.o
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job_nam2e.e
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job_name.e
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job_name.o
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out.e
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out.o
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1.6K
output_test1.e
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output_test1.o
2020-09-28 15:10
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removeTag.e
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removeTag.o
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removeTag.py
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removeTag.sh
2020-09-28 15:09
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runPicard.py
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612
runSmalt.e
2020-09-28 15:10
4.2K
runSmalt.o
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runSmalt.sh
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runTradis.e
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runTradis.o
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runTradis.sh
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runTradis2.e
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runTradis2.o
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sortBAM.sh
2020-09-28 15:10
65
sortbam.e
2020-09-28 15:10
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sortbam.o
2020-09-28 15:09
1.0K
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