Index of /pub/users/ac19/Kleb_Ent_MiSeq_run/Klebseilla_mapping

Icon  Name                                                                     Last modified      Size  Description
[PARENTDIR] Parent Directory - [   ] filterFastQ2.e 2020-09-28 14:03 0 [   ] job_nam2e.e 2020-09-28 14:04 0 [TXT] removeTag.sh 2020-09-28 15:09 63 [   ] 10210_1#7_1.notag.fastq.mapped.bam.sort.bam 2020-09-28 15:09 21M [TXT] bamcheck.sh 2020-09-28 15:09 53 [   ] 10210_1#7_1.out.HF536482.insert_site_plot.gz 2020-09-28 15:09 415K [TXT] 10210_1#4_1.notag.fastq.mapped.bam.sort.bam.insertion.csv 2020-09-28 15:09 570K [   ] filterFastQ3.e 2020-09-28 15:09 156 [   ] Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_HF536482_v1.1.gff 2020-09-28 15:09 7.7M [   ] 10210_1#8_1.notag.fastq.mapped.bam.sort.bam.corrected.bam 2020-09-28 15:09 16M [   ] 10210_1#4_1.notag.fastq.mapped.bam.sort.bam.bamcheck 2020-09-28 15:09 26K [   ] 10210_1#4_1.notag.fastq.mapped.bam.sort.bam 2020-09-28 15:09 33M [   ] 10210_1#4_1.notag.fastq.mapped.bam.sort.bam.HF536482.insert_site_plot.gz 2020-09-28 15:09 461K [   ] filterFastQ.e 2020-09-28 15:09 436 [   ] 10210_1#7_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai 2020-09-28 15:09 14K [   ] job_na2me.o 2020-09-28 15:09 1.0K [   ] 10210_1#8_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai 2020-09-28 15:09 14K [   ] 10210_1#8_1.notag.fastq 2020-09-28 15:09 28M [   ] runTradis2.o 2020-09-28 15:09 1.1K [   ] 10210_1#3_1.notag.fastq.mapped.bam.sort.bam 2020-09-28 15:09 3.6M [   ] 10210_1#4_1.notag.fastq.mapped.bam.sort.bam.corrected.bam 2020-09-28 15:09 33M [   ] 10210_1#8_1.notag.fastq.mapped.bam.sort.bam.bamcheck 2020-09-28 15:09 26K [   ] job_name.o 2020-09-28 15:09 3.1K [TXT] convertSmalt.sh 2020-09-28 15:09 69 [   ] filterFastQ2.o 2020-09-28 15:09 2.1K [TXT] filterFastQ.sh 2020-09-28 15:09 61 [TXT] 10210_1#3_1.notag.fastq.mapped.bam.sort.bam.insertion.csv 2020-09-28 15:09 555K [   ] 10210_1#7_1.fastq 2020-09-28 15:09 102M [   ] 10210_1#4_1.out.HF536483.insert_site_plot.gz 2020-09-28 15:09 28K [   ] 10210_1#3_1.out.mapped.bam 2020-09-28 15:09 26M [   ] 10210_1#8_1.notag.fastq.mapped.bam.sort.bam 2020-09-28 15:09 26M [   ] 10210_1#3_1.notag.fastq.mapped.bam.sort.bam.HF536482.insert_site_plot.gz 2020-09-28 15:09 158K [   ] sortbam.o 2020-09-28 15:09 1.0K [   ] 10210_1#3_1.notag.fastq.mapped.bam 2020-09-28 15:09 4.3M [   ] 10210_1#7_1.notag.fastq.mapped 2020-09-28 15:10 117M [   ] out.e 2020-09-28 15:10 8.5K [   ] 10210_1#4_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai 2020-09-28 15:10 14K [   ] 10210_1#8_1.notag.fastq.mapped 2020-09-28 15:10 152M [TXT] Kleb_fastq_list.txt 2020-09-28 15:10 73 [   ] 10210_1#4_1.fastq 2020-09-28 15:10 132M [TXT] runTradis.sh 2020-09-28 15:10 197 [TXT] checkSAM.sh 2020-09-28 15:10 55 [TXT] 10210_1#8_1.tag.fastq 2020-09-28 15:10 130M [   ] output_test1.o 2020-09-28 15:10 1.3K [   ] Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_v1.1.index.smi 2020-09-28 15:10 19M [   ] 10210_1#8_1.out.mapped.bam.bai 2020-09-28 15:10 14K [   ] runTradis.o 2020-09-28 15:10 1.0K [   ] 10210_1#7_1.out.mapped.bam.bai 2020-09-28 15:10 14K [   ] 10210_1#4_1.out.mapped.bam 2020-09-28 15:10 33M [TXT] checkSAM.py 2020-09-28 15:10 619 [TXT] removeTag.py 2020-09-28 15:10 650 [   ] 10210_1#8_1.out.HF536483.insert_site_plot.gz 2020-09-28 15:10 27K [TXT] runSmalt.sh 2020-09-28 15:10 128 [   ] Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_v1.1.fa 2020-09-28 15:10 5.4M [   ] 10210_1#4_1.notag.fastq 2020-09-28 15:10 75M [   ] runTradis2.e 2020-09-28 15:10 225 [   ] 10210_1#3_1.notag.fastq.mapped.bam.sort.bam.corrected.bam 2020-09-28 15:10 3.6M [TXT] 10210_1#4_1.tag.fastq 2020-09-28 15:10 130M [   ] Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_HF536482_v1.1.embl 2020-09-28 15:10 11M [   ] removeTag.e 2020-09-28 15:10 272 [   ] job_name.e 2020-09-28 15:10 56 [   ] 10210_1#3_1.out.HF536483.insert_site_plot.gz 2020-09-28 15:10 25K [   ] 10210_1#3_1.out.HF536482.insert_site_plot.gz 2020-09-28 15:10 419K [   ] 10210_1#4_1.notag.fastq.mapped 2020-09-28 15:10 152M [   ] 10210_1#4_1.out.HF536482.insert_site_plot.gz 2020-09-28 15:10 461K [   ] 10210_1#8_1.notag.fastq.mapped.bam 2020-09-28 15:10 42M [   ] runSmalt.o 2020-09-28 15:10 3.1K [   ] 10210_1#8_1.out.HF536482.insert_site_plot.gz 2020-09-28 15:10 446K [   ] 10210_1#7_1.notag.fastq.mapped.bam.sort.bam.corrected.bam 2020-09-28 15:10 2.0M [   ] convertSmalt.o 2020-09-28 15:10 1.2K [   ] removeTag.o 2020-09-28 15:10 4.2K [   ] filterFastQ3.o 2020-09-28 15:10 1.0K [TXT] sortBAM.sh 2020-09-28 15:10 65 [   ] 10210_1#4_1.notag.fastq.mapped.bam 2020-09-28 15:10 47M [   ] runTradis.e 2020-09-28 15:10 4.9K [   ] 10210_1#3_1.fastq 2020-09-28 15:10 102M [   ] 10210_1#3_1.notag.fastq.mapped 2020-09-28 15:10 14M [   ] Kleb_fastq_list.stats 2020-09-28 15:10 1.6K [   ] 10210_1#4_1.notag.fastq.mapped.bam.sort.bam.HF536483.insert_site_plot.gz 2020-09-28 15:10 28K [   ] 10210_1#3_1.out.mapped.bam.bai 2020-09-28 15:10 14K [   ] output_test1.e 2020-09-28 15:10 54 [   ] 10210_1#7_1.notag.fastq 2020-09-28 15:10 86M [   ] out.o 2020-09-28 15:10 1.6K [TXT] filterFastQ.py 2020-09-28 15:10 741 [TXT] 10210_1#7_1.tag.fastq 2020-09-28 15:10 101M [   ] 10210_1#8_1.out.mapped.bam 2020-09-28 15:10 26M [   ] filterFastQ.o 2020-09-28 15:10 4.2K [   ] 10210_1#4_1.out.mapped.bam.bai 2020-09-28 15:10 14K [   ] 10210_1#7_1.out.HF536483.insert_site_plot.gz 2020-09-28 15:10 25K [   ] 10210_1#7_1.notag.fastq.mapped.bam.sort.bam.bamcheck 2020-09-28 15:10 24K [TXT] 10210_1#3_1.tag.fastq 2020-09-28 15:10 101M [   ] 10210_1#3_1.notag.fastq.mapped.bam.sort.bam.corrected.bam.bai 2020-09-28 15:10 12K [   ] convertSmalt.e 2020-09-28 15:10 215 [   ] 10210_1#8_1.fastq 2020-09-28 15:10 132M [   ] sortbam.e 2020-09-28 15:10 163 [   ] 10210_1#3_1.notag.fastq.mapped.bam.sort.bam.bamcheck 2020-09-28 15:10 16K [   ] 10210_1#3_1.notag.fastq.mapped.bam.sort.bam.HF536483.insert_site_plot.gz 2020-09-28 15:10 11K [   ] Klebsiella_pneumoniae_subsp_pneumoniae_Ecl8_v1.1.index.sma 2020-09-28 15:10 2.1M [   ] 10210_1#7_1.notag.fastq.mapped.bam 2020-09-28 15:10 32M [   ] 10210_1#3_1.notag.fastq 2020-09-28 15:10 86M [   ] 10210_1#7_1.out.mapped.bam 2020-09-28 15:10 21M [TXT] TraDIS_plot_summary.pl 2020-09-28 15:10 2.5K [TXT] runPicard.py 2020-09-28 15:10 612 [   ] runSmalt.e 2020-09-28 15:10 4.2K