ALIGNMENT 980 YS2-10a01.p1k chr12 1120 33 894851 895950 C 1088 98.07 1245 accept 0 ALIGNMENT 1020 YS2-10a02.q1k chr09 1295 42 141045 142297 C 1254 95.06 1295 reject_bad_break 0 ALIGNMENT 0 YS2-10a02.p1k chr09 996 1003 138226 138844 F 8 0.00 1291 reject_bad_break 0 ALIGNMENT 864 YS2-10a02.p1k chr09 29 995 137259 138225 F 967 98.45 1291 reject_bad_break 0 ALIGNMENT 106 YS2-10a02.p1k chr09 1004 1257 138845 139098 F 254 82.28 1291 reject_bad_break 0 ALIGNMENT 0 YS2-10a04.q1k vc_5 268 62 37 36 C 207 0.00 307 reject_low 7 ALIGNMENT 0 YS2-10a04.p1k chr02 269 287 368181 368180 F 19 0.00 287 accept_chi 0 ALIGNMENT 0 YS2-10a04.q1k vc_7 62 269 13525 13524 F 208 0.00 307 reject_low 6 ALIGNMENT 0 YS2-10a04.q1k vc_3 266 62 2513 2512 C 205 0.00 307 reject_low 3 ALIGNMENT 41 YS2-10a04.q1k vc_1 307 267 2472 2512 C 41 100.00 307 reject_low 2 ALIGNMENT 41 YS2-10a04.q1k vc_4 267 307 5831 5871 F 41 100.00 307 reject_low 4 ALIGNMENT 0 YS2-10a04.q1k vc_4 62 266 5831 5830 F 205 0.00 307 reject_low 4 ALIGNMENT 0 YS2-10a04.q1k vc_1 266 62 2513 2512 C 205 0.00 307 reject_low 2 ALIGNMENT 41 YS2-10a04.q1k vc_3 307 267 2472 2512 C 41 100.00 307 reject_low 3 ALIGNMENT 212 YS2-10a04.q1k chr02 267 31 367944 368181 C 237 98.31 307 accept_chi 1 ALIGNMENT 36 YS2-10a04.q1k vc_5 304 269 1 36 C 36 100.00 307 reject_low 7 ALIGNMENT 39 YS2-10a04.q1k vc_5 307 269 5025 5063 C 39 100.00 307 reject_low 5 ALIGNMENT 212 YS2-10a04.p1k chr02 32 268 367944 368181 F 237 98.31 287 accept_chi 0 ALIGNMENT 0 YS2-10a04.q1k vc_5 268 62 5064 5063 C 207 0.00 307 reject_low 5 ALIGNMENT 38 YS2-10a04.q1k vc_7 270 307 13525 13562 F 38 100.00 307 reject_low 6 ALIGNMENT 0 YS2-10a04.q1k chr02 307 268 367945 367944 C 40 0.00 307 accept_chi 1 ALIGNMENT 0 YS2-10a06.q1k chrm 158 62 12337 12336 C 97 0.00 781 reject_low 14 ALIGNMENT 0 YS2-10a06.q1k chrm 781 230 9490 9489 C 552 0.00 781 reject_low 24 ALIGNMENT 0 YS2-10a06.p1k chrm 540 62 11089 11088 C 479 0.00 1284 reject_low 13 ALIGNMENT 0 YS2-10a06.p1k chrm 707 585 11505 11504 C 123 0.00 1284 reject_low 12 ALIGNMENT 0 YS2-10a06.q1k chrm 781 230 12269 12268 C 552 0.00 781 reject_low 14 ALIGNMENT 0 YS2-10a06.p1k vc_7 62 750 13562 13561 F 689 0.00 1284 reject_low 7 ALIGNMENT 65 YS2-10a06.p1k chrm 602 523 10726 10804 C 80 95.00 1284 reject_low 11 ALIGNMENT 21 YS2-10a06.p1k vc_3 781 751 2441 2472 C 31 90.32 1284 reject_low 19 ALIGNMENT 38 YS2-10a06.q1k chrm 185 229 11504 11548 F 45 97.78 781 reject_low 27 ALIGNMENT 0 YS2-10a06.q1k chrm 62 184 11504 11503 F 123 0.00 781 reject_low 27 ALIGNMENT 0 YS2-10a06.q1k vc_7 62 743 13525 13524 F 682 0.00 781 reject_low 10 ALIGNMENT 0 YS2-10a06.p1k chrm 707 591 66819 66818 C 117 0.00 1284 ambiguous 1 ALIGNMENT 0 YS2-10a06.p1k chrm 522 62 10805 10804 C 461 0.00 1284 reject_low 11 ALIGNMENT 0 YS2-10a06.p1k chrm 610 707 12335 12334 F 98 0.00 1284 reject_low 16 ALIGNMENT 0 YS2-10a06.p1k chrm 62 539 9489 9488 F 478 0.00 1284 reject_low 14 ALIGNMENT 0 YS2-10a06.q1k chrm 781 266 2715 2714 C 516 0.00 781 reject_low 20 ALIGNMENT 0 YS2-10a06.q1k chrm 179 62 2802 2801 C 118 0.00 781 reject_low 20 ALIGNMENT 0 YS2-10a06.q1k chrm 732 781 65061 65060 F 50 0.00 781 ambiguous 1 ALIGNMENT 0 YS2-10a06.q1k chrm 741 781 6209 6208 F 41 0.00 781 reject_low 11,12 ALIGNMENT 43 YS2-10a06.p1k chrm 589 515 34927 35006 C 75 88.00 1284 reject_low 17 ALIGNMENT 0 YS2-10a06.p1k vc_3 750 62 2473 2472 C 689 0.00 1284 reject_low 19 ALIGNMENT 0 YS2-10a06.q1k chrm 255 781 35006 35005 F 527 0.00 781 reject_low 15 ALIGNMENT 0 YS2-10a06.q1k chrm 229 781 11088 11087 F 553 0.00 781 reject_low 25 ALIGNMENT 0 YS2-10a06.p1k vc_2 750 62 2106 2105 C 689 0.00 1284 reject_low 3 ALIGNMENT 0 YS2-10a06.p1k chrm 707 590 34928 34927 C 118 0.00 1284 reject_low 17 ALIGNMENT 0 YS2-10a06.q1k chrm 247 781 10804 10803 F 535 0.00 781 reject_low 13 ALIGNMENT 41 YS2-10a06.q1k chrm 229 180 9489 9539 C 50 96.00 781 reject_low 24 ALIGNMENT 38 YS2-10a06.p1k chrm 586 540 35802 35848 C 47 95.74 1284 reject_low 15 ALIGNMENT 47 YS2-10a06.q1k chrm 174 259 2083 2163 F 86 88.37 781 reject_low 12 ALIGNMENT 0 YS2-10a06.p1k chrm 539 62 35849 35848 C 478 0.00 1284 reject_low 15 ALIGNMENT 0 YS2-10a06.p1k chrm 539 62 11549 11548 C 478 0.00 1284 reject_low 12 ALIGNMENT 68 YS2-10a06.q1k chrm 167 246 10726 10804 F 80 96.25 781 reject_low 13 ALIGNMENT 0 YS2-10a06.p1k vc_1 750 62 2473 2472 C 689 0.00 1284 reject_low 18 ALIGNMENT 0 YS2-10a06.q1k chrm 242 781 83109 83108 F 540 0.00 781 reject_low 23 ALIGNMENT 0 YS2-10a06.q1k chrm 62 163 3036 3035 F 102 0.00 781 reject_low 11 ALIGNMENT 0 YS2-10a06.q1k vc_7 62 743 63 62 F 682 0.00 781 reject_low 9 ALIGNMENT 0 YS2-10a06.p1k chrm 540 62 66869 66868 C 479 0.00 1284 ambiguous 1 ALIGNMENT 0 YS2-10a06.q1k chrm 781 230 71214 71213 C 552 0.00 781 reject_low 28 ALIGNMENT 38 YS2-10a06.p1k chrm 540 584 71213 71257 F 45 97.78 1284 reject_low 22 ALIGNMENT 0 YS2-10a06.q1k chrm 184 62 71258 71257 C 123 0.00 781 reject_low 28 ALIGNMENT 0 YS2-10a06.p1k chrm 590 707 9539 9538 F 118 0.00 1284 reject_low 14 ALIGNMENT 38 YS2-10a06.q1k vc_7 744 781 63 100 F 38 100.00 781 reject_low 9 ALIGNMENT 0 YS2-10a06.q1k chrm 62 179 11039 11038 F 118 0.00 781 reject_low 25 ALIGNMENT 204 YS2-10a06.p1k vc_7 751 1174 13562 14002 F 424 84.67 1284 reject_low 7 ALIGNMENT 44 YS2-10a06.q1k chrm 159 229 9002 9074 F 71 88.73 781 reject_low 21 ALIGNMENT 201 YS2-10a06.p1k vc_4 751 1046 5871 6172 F 296 90.20 1284 reject_low 8 ALIGNMENT 0 YS2-10a06.p1k vc_7 62 750 100 99 F 689 0.00 1284 reject_low 6 ALIGNMENT 0 YS2-10a06.q1k chrm 62 178 66818 66817 F 117 0.00 781 reject_low 26 ALIGNMENT 40 YS2-10a06.q1k chrm 180 228 11039 11088 F 49 95.92 781 reject_low 25 ALIGNMENT 0 YS2-10a06.q1k chrm 245 709 3118 6178 F 465 0.00 781 reject_low 11 ALIGNMENT 40 YS2-10a06.p1k chrm 589 541 11039 11088 C 49 95.92 1284 reject_low 13 ALIGNMENT 0 YS2-10a06.p1k chrm 514 62 35007 35006 C 453 0.00 1284 reject_low 17 ALIGNMENT 0 YS2-10a06.q1k chrm 260 709 2164 6178 F 450 0.00 781 reject_low 12 ALIGNMENT 204 YS2-10a06.p1k vc_7 751 1174 100 540 F 424 84.67 1284 reject_low 6 ALIGNMENT 0 YS2-10a06.p1k chrm 62 539 12268 12267 F 478 0.00 1284 reject_low 16 ALIGNMENT 38 YS2-10a06.q1k chrm 229 185 71213 71257 C 45 97.78 781 reject_low 28 ALIGNMENT 204 YS2-10a06.p1k vc_2 1174 751 1665 2105 C 424 84.67 1284 reject_low 3 ALIGNMENT 565 YS2-10a06.q1k chrm 37 731 64367 65061 F 695 99.57 781 ambiguous 1 ALIGNMENT 43 YS2-10a06.q1k chrm 180 254 34927 35006 F 75 88.00 781 reject_low 15 ALIGNMENT 21 YS2-10a06.p1k vc_1 781 751 2441 2472 C 31 90.32 1284 reject_low 18 ALIGNMENT 0 YS2-10a06.p1k chrm 707 590 11040 11039 C 118 0.00 1284 reject_low 13 ALIGNMENT 46 YS2-10a06.p1k chrm 540 609 12268 12335 F 70 91.43 1284 reject_low 16 ALIGNMENT 0 YS2-10a06.q1k chrm 229 781 66868 66867 F 553 0.00 781 reject_low 26 ALIGNMENT 0 YS2-10a06.p1k vc_5 750 62 5026 5025 C 689 0.00 1284 reject_low 5 ALIGNMENT 38 YS2-10a06.q1k vc_7 744 781 13525 13562 F 38 100.00 781 reject_low 10 ALIGNMENT 204 YS2-10a06.p1k vc_5 1174 751 4585 5025 C 424 84.67 1284 reject_low 5 ALIGNMENT 0 YS2-10a06.p1k chrm 62 539 71213 71212 F 478 0.00 1284 reject_low 22 ALIGNMENT 0 YS2-10a06.p1k chrm 707 587 35803 35802 C 121 0.00 1284 reject_low 15 ALIGNMENT 0 YS2-10a06.p1k vc_3 750 62 2106 2105 C 689 0.00 1284 reject_low 4 ALIGNMENT 204 YS2-10a06.p1k vc_3 1174 751 1665 2105 C 424 84.67 1284 reject_low 4 ALIGNMENT 0 YS2-10a06.q1k chrm 62 184 83052 83051 F 123 0.00 781 reject_low 23 ALIGNMENT 0 YS2-10a06.q1k chrm 230 781 9074 9073 F 552 0.00 781 reject_low 21 ALIGNMENT 42 YS2-10a06.q1k chrm 265 180 2714 2801 C 86 86.05 781 reject_low 20 ALIGNMENT 0 YS2-10a06.q1k chrm 62 166 10726 10725 F 105 0.00 781 reject_low 13 ALIGNMENT 38 YS2-10a06.p1k chrm 590 541 66818 66868 C 50 94.00 1284 ambiguous 1 ALIGNMENT 38 YS2-10a06.p1k chrm 584 540 11504 11548 C 45 97.78 1284 reject_low 12 ALIGNMENT 41 YS2-10a06.p1k chrm 540 589 9489 9539 F 50 96.00 1284 reject_low 14 ALIGNMENT 49 YS2-10a06.q1k chrm 229 159 12268 12336 C 71 92.96 781 reject_low 14 ALIGNMENT 38 YS2-10a06.q1k chrm 179 228 66818 66868 F 50 94.00 781 reject_low 26 ALIGNMENT 0 YS2-10a06.q1k chrm 62 173 2083 2082 F 112 0.00 781 reject_low 12 ALIGNMENT 0 YS2-10a06.p1k vc_1 750 62 2106 2105 C 689 0.00 1284 reject_low 2 ALIGNMENT 555 YS2-10a06.p1k chrm 733 38 64367 65061 C 696 98.99 1284 ambiguous 0 ALIGNMENT 51 YS2-10a06.q1k chrm 164 244 3036 3117 F 81 90.12 781 reject_low 11 ALIGNMENT 204 YS2-10a06.p1k vc_1 1174 751 1665 2105 C 424 84.67 1284 reject_low 2 ALIGNMENT 0 YS2-10a06.p1k chrm 585 707 71257 71256 F 123 0.00 1284 reject_low 22 ALIGNMENT 0 YS2-10a06.p1k chrm 707 603 10727 10726 C 105 0.00 1284 reject_low 11 ALIGNMENT 0 YS2-10a06.q1k chrm 62 158 9002 9001 F 97 0.00 781 reject_low 21 ALIGNMENT 46 YS2-10a06.q1k chrm 185 241 83052 83109 F 57 94.74 781 reject_low 23 ALIGNMENT 0 YS2-10a06.p1k vc_4 62 750 5871 5870 F 689 0.00 1284 reject_low 8 ALIGNMENT 0 YS2-10a06.q1k chrm 179 62 9540 9539 C 118 0.00 781 reject_low 24 ALIGNMENT 0 YS2-10a06.q1k chrm 62 179 34927 34926 F 118 0.00 781 reject_low 15 ALIGNMENT 24 YS2-10a06.q1k chrm 710 740 6179 6209 F 31 96.77 781 reject_low 11,12 ALIGNMENT 0 YS2-10a06.q1k chrm 230 781 11548 11547 F 552 0.00 781 reject_low 27 ALIGNMENT 47 YS2-10a08.p1k chrm 353 442 8211 8299 F 90 85.56 575 reject_low 10 ALIGNMENT 0 YS2-10a08.p1k chrm 443 575 8299 8298 F 133 0.00 575 reject_low 10 ALIGNMENT 0 YS2-10a08.p1k chrm 425 575 34333 34332 F 151 0.00 575 reject_low 9 ALIGNMENT 0 YS2-10a08.q1k chrm 593 209 46315 46314 C 385 0.00 593 reject_low 21 ALIGNMENT 36 YS2-10a08.p1k chrm 422 378 57027 57071 C 45 95.56 575 reject_low 23 ALIGNMENT 0 YS2-10a08.p1k chrm 421 575 10788 10787 F 155 0.00 575 reject_low 24 ALIGNMENT 40 YS2-10a08.q1k vc_3 593 554 2472 2511 C 40 100.00 593 reject_low 3 ALIGNMENT 0 YS2-10a08.q1k chrm 165 62 62904 62903 C 104 0.00 593 reject_low 22 ALIGNMENT 0 YS2-10a08.q1k chrm 62 158 4530 4529 F 97 0.00 593 reject_low 8 ALIGNMENT 0 YS2-10a08.q1k chrm 593 555 79828 79827 C 39 0.00 593 ambiguous 0 ALIGNMENT 0 YS2-10a08.p1k chrm 62 376 62861 62860 F 315 0.00 575 reject_low 27 ALIGNMENT 0 YS2-10a08.q1k chrm 593 209 10746 10745 C 385 0.00 593 reject_low 10,14 ALIGNMENT 0 YS2-10a08.q1k chrm 164 62 10789 10788 C 103 0.00 593 reject_low 10,14 ALIGNMENT 0 YS2-10a08.q1k chrm 62 142 63 62 F 81 0.00 593 reject_low 6,7 ALIGNMENT 0 YS2-10a08.p1k chrm 575 423 57028 57027 C 153 0.00 575 reject_low 23 ALIGNMENT 34 YS2-10a08.p1k chrm 377 419 62861 62903 F 43 95.35 575 reject_low 27 ALIGNMENT 39 YS2-10a08.p1k chrm 442 353 63 154 C 90 83.33 575 reject_low 15 ALIGNMENT 0 YS2-10a08.p1k chrm 575 423 2750 2749 C 153 0.00 575 reject_low 7 ALIGNMENT 0 YS2-10a08.q1k chrm 593 229 43078 43077 C 365 0.00 593 reject_low 9 ALIGNMENT 0 YS2-10a08.p1k chrm 425 575 10439 10438 F 151 0.00 575 reject_low 25 ALIGNMENT 39 YS2-10a08.q1k chrm 212 164 83049 83097 C 49 93.88 593 ambiguous 0 ALIGNMENT 44 YS2-10a08.p1k chrm 357 437 43077 43157 F 81 86.42 575 reject_low 11 ALIGNMENT 0 YS2-10a08.p1k chrm 352 62 4603 4602 C 291 0.00 575 reject_low 6 ALIGNMENT 161 YS2-10a08.p1k chrm 31 226 79827 80022 F 196 96.94 575 ambiguous 1 ALIGNMENT 0 YS2-10a08.p1k chrm 62 372 69049 69048 F 311 0.00 575 ambiguous 0 ALIGNMENT 0 YS2-10a08.q1k vc_7 62 555 13525 13524 F 494 0.00 593 reject_low 5 ALIGNMENT 0 YS2-10a08.p1k chrm 62 357 2076 2075 F 296 0.00 575 reject_low 14 ALIGNMENT 0 YS2-10a08.p1k chrm 62 378 53828 53827 F 317 0.00 575 reject_low 12 ALIGNMENT 0 YS2-10a08.q1k chrm 233 593 4602 4601 F 361 0.00 593 reject_low 8 ALIGNMENT 40 YS2-10a08.q1k vc_4 554 593 5832 5871 F 40 100.00 593 reject_low 4 ALIGNMENT 40 YS2-10a08.p1k chrm 422 373 2749 2798 C 50 94.00 575 reject_low 7 ALIGNMENT 47 YS2-10a08.p1k chrm 426 353 4530 4602 C 74 89.19 575 reject_low 6 ALIGNMENT 34 YS2-10a08.p1k chrm 378 424 10394 10439 F 47 93.62 575 reject_low 25 ALIGNMENT 0 YS2-10a08.p1k chrm 438 575 43157 43156 F 138 0.00 575 reject_low 11 ALIGNMENT 38 YS2-10a08.p1k chrm 373 424 69049 69099 F 52 92.31 575 ambiguous 0 ALIGNMENT 40 YS2-10a08.p1k chrm 377 432 64516 64571 F 56 91.07 575 reject_low 13 ALIGNMENT 0 YS2-10a08.q1k chrm 152 62 64572 64571 C 91 0.00 593 reject_low 12 ALIGNMENT 34 YS2-10a08.q1k chrm 208 166 46314 46356 C 43 95.35 593 reject_low 21 ALIGNMENT 36 YS2-10a08.q1k chrm 163 207 57027 57071 F 45 95.56 593 reject_low 17 ALIGNMENT 0 YS2-10a08.q1k chrm 160 62 34334 34333 C 99 0.00 593 reject_low 19 ALIGNMENT 39 YS2-10a08.q1k chrm 143 232 63 154 F 90 83.33 593 reject_low 6,7 ALIGNMENT 40 YS2-10a08.q1k chrm 208 153 64516 64571 C 56 91.07 593 reject_low 12 ALIGNMENT 161 YS2-10a08.q1k chrm 554 359 79827 80022 C 196 96.94 593 ambiguous 0 ALIGNMENT 39 YS2-10a08.p1k chrm 373 421 83049 83097 F 49 93.88 575 ambiguous 1 ALIGNMENT 0 YS2-10a08.q1k chrm 593 209 34287 34286 C 385 0.00 593 reject_low 19 ALIGNMENT 0 YS2-10a08.q1k chrm 208 593 57071 57070 F 386 0.00 593 reject_low 17 ALIGNMENT 43 YS2-10a08.q1k chrm 159 208 12262 12311 F 50 96.00 593 reject_low 18 ALIGNMENT 0 YS2-10a08.p1k chrm 62 376 64516 64515 F 315 0.00 575 reject_low 13 ALIGNMENT 0 YS2-10a08.q1k chrm 593 208 10395 10394 C 386 0.00 593 reject_low 20 ALIGNMENT 0 YS2-10a08.p1k chrm 372 62 2799 2798 C 311 0.00 575 reject_low 7 ALIGNMENT 0 YS2-10a08.p1k chrm 422 575 83097 83096 F 154 0.00 575 ambiguous 1 ALIGNMENT 0 YS2-10a08.q1k chrm 160 62 10440 10439 C 99 0.00 593 reject_low 20 ALIGNMENT 0 YS2-10a08.p1k chrm 62 377 10394 10393 F 316 0.00 575 reject_low 25 ALIGNMENT 0 YS2-10a08.q1k chrm 165 62 48144 48143 C 104 0.00 593 reject_low 11 ALIGNMENT 44 YS2-10a08.q1k chrm 228 148 43077 43157 C 81 86.42 593 reject_low 9 ALIGNMENT 40 YS2-10a08.q1k chrm 208 161 34286 34333 C 48 95.83 593 reject_low 19 ALIGNMENT 0 YS2-10a08.p1k chrm 575 443 64 63 C 133 0.00 575 reject_low 15 ALIGNMENT 0 YS2-10a08.p1k chrm 575 427 4531 4530 C 149 0.00 575 reject_low 6 ALIGNMENT 0 YS2-10a08.q1k chrm 62 162 57027 57026 F 101 0.00 593 reject_low 17 ALIGNMENT 33 YS2-10a08.p1k chrm 420 377 67946 67989 C 44 93.18 575 reject_low 17 ALIGNMENT 0 YS2-10a08.q1k chrm 165 62 46357 46356 C 104 0.00 593 reject_low 21 ALIGNMENT 40 YS2-10a08.p1k chrm 377 424 34286 34333 F 48 95.83 575 reject_low 9 ALIGNMENT 0 YS2-10a08.p1k chrm 575 427 12263 12262 C 149 0.00 575 reject_low 8 ALIGNMENT 0 YS2-10a08.q1k vc_3 553 62 2512 2511 C 492 0.00 593 reject_low 3 ALIGNMENT 0 YS2-10a08.p1k chrm 62 376 10745 10744 F 315 0.00 575 reject_low 24 ALIGNMENT 0 YS2-10a08.p1k chrm 420 575 2136 2135 F 156 0.00 575 reject_low 14 ALIGNMENT 36 YS2-10a08.q1k chrm 208 165 10745 10788 C 44 95.45 593 reject_low 10,14 ALIGNMENT 0 YS2-10a08.p1k chrm 376 62 67990 67989 C 315 0.00 575 reject_low 17 ALIGNMENT 43 YS2-10a08.p1k chrm 426 377 12262 12311 C 50 96.00 575 reject_low 8 ALIGNMENT 0 YS2-10a08.p1k chrm 420 575 46356 46355 F 156 0.00 575 reject_low 26 ALIGNMENT 0 YS2-10a08.p1k chrm 62 376 46314 46313 F 315 0.00 575 reject_low 26 ALIGNMENT 37 YS2-10a08.p1k chrm 379 426 53828 53875 F 48 93.75 575 reject_low 12 ALIGNMENT 0 YS2-10a08.p1k chrm 62 352 8211 8210 F 291 0.00 575 reject_low 10 ALIGNMENT 0 YS2-10a08.q1k chrm 158 62 53876 53875 C 97 0.00 593 reject_low 16 ALIGNMENT 38 YS2-10a08.q1k chrm 217 166 48093 48143 C 52 92.31 593 reject_low 11 ALIGNMENT 0 YS2-10a08.p1k chrm 352 62 155 154 C 291 0.00 575 reject_low 15 ALIGNMENT 38 YS2-10a08.p1k chrm 368 419 48093 48143 F 52 92.31 575 reject_low 16 ALIGNMENT 38 YS2-10a08.q1k vc_7 556 593 13525 13562 F 38 100.00 593 reject_low 5 ALIGNMENT 0 YS2-10a08.p1k chrm 420 575 62903 62902 F 156 0.00 575 reject_low 27 ALIGNMENT 0 YS2-10a08.p1k chrm 433 575 64571 64570 F 143 0.00 575 reject_low 13 ALIGNMENT 37 YS2-10a08.q1k chrm 206 159 53828 53875 C 48 93.75 593 reject_low 16 ALIGNMENT 38 YS2-10a08.q1k chrm 212 161 69049 69099 C 52 92.31 593 reject_low 13 ALIGNMENT 0 YS2-10a08.q1k vc_4 62 553 5832 5831 F 492 0.00 593 reject_low 4 ALIGNMENT 36 YS2-10a08.p1k chrm 377 420 10745 10788 F 44 95.45 575 reject_low 24 ALIGNMENT 0 YS2-10a08.q1k chrm 593 209 62862 62861 C 385 0.00 593 reject_low 22 ALIGNMENT 34 YS2-10a08.p1k chrm 377 419 46314 46356 F 43 95.35 575 reject_low 26 ALIGNMENT 0 YS2-10a08.q1k chrm 209 593 12311 12310 F 385 0.00 593 reject_low 18 ALIGNMENT 0 YS2-10a08.q1k chrm 163 62 83098 83097 C 102 0.00 593 ambiguous 0 ALIGNMENT 34 YS2-10a08.q1k chrm 207 161 10394 10439 C 47 93.62 593 reject_low 20 ALIGNMENT 47 YS2-10a08.q1k chrm 159 232 4530 4602 F 74 89.19 593 reject_low 8 ALIGNMENT 0 YS2-10a08.p1k chrm 227 372 80023 83048 F 146 0.00 575 ambiguous 1 ALIGNMENT 39 YS2-10a08.p1k chrm 358 419 2076 2136 F 62 88.71 575 reject_low 14 ALIGNMENT 0 YS2-10a08.q1k chrm 593 207 53829 53828 C 387 0.00 593 reject_low 16 ALIGNMENT 0 YS2-10a08.q1k chrm 233 593 154 153 F 361 0.00 593 reject_low 6,7 ALIGNMENT 0 YS2-10a08.p1k chrm 62 356 43077 43076 F 295 0.00 575 reject_low 11 ALIGNMENT 0 YS2-10a08.p1k chrm 575 421 67947 67946 C 155 0.00 575 reject_low 17 ALIGNMENT 0 YS2-10a08.q1k chrm 593 213 69050 69049 C 381 0.00 593 reject_low 13 ALIGNMENT 0 YS2-10a08.p1k chrm 377 62 57072 57071 C 316 0.00 575 reject_low 23 ALIGNMENT 0 YS2-10a08.q1k chrm 160 62 69100 69099 C 99 0.00 593 reject_low 13 ALIGNMENT 40 YS2-10a08.q1k vc_1 593 554 2472 2511 C 40 100.00 593 reject_low 2 ALIGNMENT 0 YS2-10a08.p1k chrm 62 367 48093 48092 F 306 0.00 575 reject_low 16 ALIGNMENT 0 YS2-10a08.p1k chrm 427 575 53875 53874 F 149 0.00 575 reject_low 12 ALIGNMENT 0 YS2-10a08.p1k chrm 376 62 12312 12311 C 315 0.00 575 reject_low 8 ALIGNMENT 0 YS2-10a08.q1k chrm 593 218 48094 48093 C 376 0.00 593 reject_low 11 ALIGNMENT 0 YS2-10a08.p1k chrm 62 376 34286 34285 F 315 0.00 575 reject_low 9 ALIGNMENT 0 YS2-10a08.q1k chrm 147 62 43158 43157 C 86 0.00 593 reject_low 9 ALIGNMENT 34 YS2-10a08.q1k chrm 208 166 62861 62903 C 43 95.35 593 reject_low 22 ALIGNMENT 0 YS2-10a08.q1k chrm 593 209 64517 64516 C 385 0.00 593 reject_low 12 ALIGNMENT 0 YS2-10a08.p1k chrm 425 575 69099 69098 F 151 0.00 575 ambiguous 0 ALIGNMENT 0 YS2-10a08.q1k chrm 62 158 12262 12261 F 97 0.00 593 reject_low 18 ALIGNMENT 0 YS2-10a08.q1k vc_1 553 62 2512 2511 C 492 0.00 593 reject_low 2 ALIGNMENT 0 YS2-10a08.q1k chrm 358 213 80023 83048 C 146 0.00 593 ambiguous 0 ALIGNMENT 0 YS2-10a08.p1k chrm 420 575 48143 48142 F 156 0.00 575 reject_low 16 ALIGNMENT 39 YS2-10a09.q1k vc_5 588 550 5025 5063 C 39 100.00 588 reject_low 5 ALIGNMENT 0 YS2-10a09.q1k vc_1 547 62 2513 2512 C 486 0.00 588 reject_low 2 ALIGNMENT 0 YS2-10a09.p1k chr04 548 566 603939 603938 F 19 0.00 566 accept_chi 0 ALIGNMENT 38 YS2-10a09.q1k vc_7 551 588 13525 13562 F 38 100.00 588 reject_low 6 ALIGNMENT 41 YS2-10a09.q1k vc_3 588 548 2472 2512 C 41 100.00 588 reject_low 3 ALIGNMENT 0 YS2-10a09.q1k vc_7 62 550 13525 13524 F 489 0.00 588 reject_low 6 ALIGNMENT 0 YS2-10a09.q1k vc_4 62 547 5831 5830 F 486 0.00 588 reject_low 4 ALIGNMENT 41 YS2-10a09.q1k vc_4 548 588 5831 5871 F 41 100.00 588 reject_low 4 ALIGNMENT 486 YS2-10a09.p1k chr04 30 547 603422 603939 F 518 99.23 566 accept_chi 0 ALIGNMENT 41 YS2-10a09.q1k vc_1 588 548 2472 2512 C 41 100.00 588 reject_low 2 ALIGNMENT 0 YS2-10a09.q1k chr04 588 548 603423 603422 C 41 0.00 588 accept_chi 1 ALIGNMENT 484 YS2-10a09.q1k chr04 547 32 603422 603937 C 516 99.22 588 accept_chi 1 ALIGNMENT 0 YS2-10a09.q1k vc_5 549 62 37 36 C 488 0.00 588 reject_low 7 ALIGNMENT 36 YS2-10a09.q1k vc_5 585 550 1 36 C 36 100.00 588 reject_low 7 ALIGNMENT 0 YS2-10a09.q1k vc_5 549 62 5064 5063 C 488 0.00 588 reject_low 5 ALIGNMENT 0 YS2-10a09.q1k vc_3 547 62 2513 2512 C 486 0.00 588 reject_low 3 ALIGNMENT 0 YS2-10a10.p1k chr12 942 996 467822 467852 F 55 0.00 1291 reject_low 2 ALIGNMENT 1042 YS2-10a10.q1k chr12 1209 40 452788 453969 C 1170 96.24 1338 reject_low 1 ALIGNMENT 1042 YS2-10a10.q1k chr12 1209 40 461925 463106 C 1170 96.24 1338 reject_bad_break 0 ALIGNMENT 0 YS2-10a10.p1k chr12 942 996 458685 458715 F 55 0.00 1291 reject_bad_break 0 ALIGNMENT 29 YS2-10a10.p1k chr12 997 1088 467853 467955 F 92 83.70 1291 reject_low 2 ALIGNMENT 825 YS2-10a10.p1k chr12 34 941 457787 458684 F 908 98.13 1291 reject_bad_break 0 ALIGNMENT 29 YS2-10a10.p1k chr12 997 1088 458716 458818 F 92 83.70 1291 reject_bad_break 0 ALIGNMENT 825 YS2-10a10.p1k chr12 34 941 466924 467821 F 908 98.13 1291 reject_low 2 ALIGNMENT 0 YS2-10a11.q1k chr08 884 764 543631 543630 C 121 0.00 1356 reject_low 14 ALIGNMENT 186 YS2-10a11.q1k chr01 779 452 160243 160575 C 328 87.80 1356 reject_low 20 ALIGNMENT 250 YS2-10a11.q1k chr11 779 452 457787 458114 C 328 93.90 1356 reject_low 10 ALIGNMENT 0 YS2-10a11.q1k chr10 774 884 483876 483875 F 111 0.00 1356 reject_low 18 ALIGNMENT 0 YS2-10a11.q1k chr14 192 451 519164 524729 F 260 0.00 1356 reject_low 22 ALIGNMENT 253 YS2-10a11.q1k chr07 763 452 823000 823311 C 312 95.51 1356 reject_low 12 ALIGNMENT 70 YS2-10a11.q1k chr14 121 191 519093 519163 F 71 100.00 1356 reject_low 21,22 ALIGNMENT 0 YS2-10a11.q1k chr14 780 884 519493 519492 F 105 0.00 1356 reject_low 21 ALIGNMENT 0 YS2-10a11.q1k chr11 450 62 517428 517427 C 389 0.00 1356 reject_low 5 ALIGNMENT 250 YS2-10a11.q1k chr02 452 763 265161 265472 F 312 95.19 1356 reject_low 13 ALIGNMENT 0 YS2-10a11.q1k chr14 884 780 96615 96614 C 105 0.00 1356 reject_low 7 ALIGNMENT 891 YS2-10a11.p1k chr10 27 1045 350840 351875 F 1019 96.76 1229 accept 0 ALIGNMENT 0 YS2-10a11.q1k chr15 449 62 980589 980588 C 388 0.00 1356 reject_low 4 ALIGNMENT 250 YS2-10a11.q1k chr08 763 452 543630 543941 C 312 95.19 1356 reject_low 14 ALIGNMENT 0 YS2-10a11.q1k chr07 884 764 817419 817418 C 121 0.00 1356 reject_low 11 ALIGNMENT 259 YS2-10a11.q1k chr14 779 452 96614 96941 C 328 94.82 1356 reject_low 7 ALIGNMENT 0 YS2-10a11.q1k chr10 774 884 472704 472703 F 111 0.00 1356 reject_low 16 ALIGNMENT 253 YS2-10a11.q1k chr07 763 452 817418 817729 C 312 95.51 1356 reject_low 11 ALIGNMENT 0 YS2-10a11.q1k chr07 62 450 535763 535762 F 389 0.00 1356 reject_low 15 ALIGNMENT 0 YS2-10a11.q1k chr02 62 451 265161 265160 F 390 0.00 1356 reject_low 13 ALIGNMENT 0 YS2-10a11.q1k chr14 451 62 96942 96941 C 390 0.00 1356 reject_low 7 ALIGNMENT 0 YS2-10a11.q1k chr10 884 774 354771 354770 C 111 0.00 1356 reject_low 1 ALIGNMENT 0 YS2-10a11.q1k chr10 294 884 374505 374504 F 591 0.00 1356 reject_low 2 ALIGNMENT 0 YS2-10a11.q1k chr13 884 780 357009 357008 C 105 0.00 1356 reject_low 8 ALIGNMENT 0 YS2-10a11.q1k chr03 451 62 124463 124462 C 390 0.00 1356 reject_low 6 ALIGNMENT 0 YS2-10a11.q1k chr14 780 884 525059 525058 F 105 0.00 1356 reject_low 22 ALIGNMENT 0 YS2-10a11.q1k chr13 451 62 357336 357335 C 390 0.00 1356 reject_low 8 ALIGNMENT 187 YS2-10a11.q1k chr01 779 451 165831 166164 C 329 87.84 1356 reject_low 19 ALIGNMENT 56 YS2-10a11.q1k chr07 674 760 817303 817387 F 87 90.80 1356 reject_low 23 ALIGNMENT 130 YS2-10a11.q1k chr14 452 779 519164 519493 F 328 82.62 1356 reject_low 21 ALIGNMENT 0 YS2-10a11.q1k chr11 884 780 517100 517099 C 105 0.00 1356 reject_low 5 ALIGNMENT 0 YS2-10a11.q1k chr07 62 451 541352 541351 F 390 0.00 1356 reject_low 17 ALIGNMENT 0 YS2-10a11.q1k chr02 764 884 265472 265471 F 121 0.00 1356 reject_low 13 ALIGNMENT 0 YS2-10a11.q1k chr11 884 780 457788 457787 C 105 0.00 1356 reject_low 10 ALIGNMENT 0 YS2-10a11.q1k chr13 451 62 362918 362917 C 390 0.00 1356 reject_low 9 ALIGNMENT 0 YS2-10a11.q1k chr03 884 780 124136 124135 C 105 0.00 1356 reject_low 6 ALIGNMENT 0 YS2-10a11.q1k chr10 62 119 374332 374331 F 58 0.00 1356 reject_low 2 ALIGNMENT 258 YS2-10a11.q1k chr11 779 451 517099 517427 C 329 94.53 1356 reject_low 5 ALIGNMENT 0 YS2-10a11.q1k chr10 474 62 354760 354759 C 413 0.00 1356 accept 0 ALIGNMENT 0 YS2-10a11.q1k chr14 192 451 519164 519163 F 260 0.00 1356 reject_low 21 ALIGNMENT 0 YS2-10a11.q1k chr01 451 62 160576 160575 C 390 0.00 1356 reject_low 20 ALIGNMENT 0 YS2-10a11.q1k chr07 761 884 817387 817386 F 124 0.00 1356 reject_low 23 ALIGNMENT 258 YS2-10a11.q1k chr07 435 780 535198 535543 F 346 93.35 1356 reject_low 3 ALIGNMENT 0 YS2-10a11.q1k chr07 451 62 823312 823311 C 390 0.00 1356 reject_low 12 ALIGNMENT 264 YS2-10a11.q1k chr15 779 450 980259 980588 C 330 95.15 1356 reject_low 4 ALIGNMENT 426 YS2-10a11.q1k chr10 773 40 354770 355530 C 734 87.74 1356 reject_low 1 ALIGNMENT 238 YS2-10a11.q1k chr10 451 773 472376 472704 F 323 93.19 1356 reject_low 16 ALIGNMENT 0 YS2-10a11.q1k chr07 774 884 541679 541678 F 111 0.00 1356 reject_low 17 ALIGNMENT 0 YS2-10a11.q1k chr11 451 62 458115 458114 C 390 0.00 1356 reject_low 10 ALIGNMENT 238 YS2-10a11.q1k chr07 451 773 535763 536091 F 323 93.19 1356 reject_low 15 ALIGNMENT 0 YS2-10a11.q1k chr01 450 62 166165 166164 C 389 0.00 1356 reject_low 19 ALIGNMENT 0 YS2-10a11.q1k chr15 884 780 980260 980259 C 105 0.00 1356 reject_low 4 ALIGNMENT 0 YS2-10a11.q1k chr07 62 673 817303 817302 F 612 0.00 1356 reject_low 23 ALIGNMENT 130 YS2-10a11.q1k chr14 452 779 524730 525059 F 328 82.62 1356 reject_low 22 ALIGNMENT 259 YS2-10a11.q1k chr03 779 452 124135 124462 C 328 94.82 1356 reject_low 6 ALIGNMENT 0 YS2-10a11.q1k chr07 451 62 817730 817729 C 390 0.00 1356 reject_low 11 ALIGNMENT 0 YS2-10a11.q1k chr13 884 780 362591 362590 C 105 0.00 1356 reject_low 9 ALIGNMENT 0 YS2-10a11.q1k chr07 62 434 535198 535197 F 373 0.00 1356 reject_low 3 ALIGNMENT 0 YS2-10a11.q1k chr14 62 120 519093 519092 F 59 0.00 1356 reject_low 21,22 ALIGNMENT 0 YS2-10a11.q1k chr10 62 450 472376 472375 F 389 0.00 1356 reject_low 16 ALIGNMENT 559 YS2-10a11.q1k chr10 1196 475 354031 354759 C 722 94.04 1356 accept 0 ALIGNMENT 0 YS2-10a11.q1k chr07 781 884 535543 535542 F 104 0.00 1356 reject_low 3 ALIGNMENT 0 YS2-10a11.q1k chr07 884 764 823001 823000 C 121 0.00 1356 reject_low 12 ALIGNMENT 237 YS2-10a11.q1k chr10 452 773 483549 483876 F 322 93.17 1356 reject_low 18 ALIGNMENT 0 YS2-10a11.q1k chr10 62 451 483549 483548 F 390 0.00 1356 reject_low 18 ALIGNMENT 0 YS2-10a11.q1k chr01 884 780 160244 160243 C 105 0.00 1356 reject_low 20 ALIGNMENT 237 YS2-10a11.q1k chr07 452 773 541352 541679 F 322 93.17 1356 reject_low 17 ALIGNMENT 0 YS2-10a11.q1k chr01 884 780 165832 165831 C 105 0.00 1356 reject_low 19 ALIGNMENT 256 YS2-10a11.q1k chr13 779 452 362590 362917 C 328 94.51 1356 reject_low 9 ALIGNMENT 170 YS2-10a11.q1k chr10 120 293 374332 374505 F 174 99.43 1356 reject_low 2 ALIGNMENT 0 YS2-10a11.q1k chr08 451 62 543942 543941 C 390 0.00 1356 reject_low 14 ALIGNMENT 256 YS2-10a11.q1k chr13 779 452 357008 357335 C 328 94.51 1356 reject_low 8 ALIGNMENT 0 YS2-10a11.q1k chr07 774 884 536091 536090 F 111 0.00 1356 reject_low 15 ALIGNMENT 935 YS2-10a12.q1k chr15 40 1219 889587 890762 F 1180 94.58 1365 accept 0 ALIGNMENT 1039 YS2-10a12.p1k chr15 1261 32 891848 893077 C 1230 95.37 1335 accept 0 ALIGNMENT 935 YS2-10a13.q1k chr07 30 1086 962040 963110 F 1057 97.07 1242 accept 0 ALIGNMENT 1031 YS2-10a13.p1k chr07 1299 34 966388 967660 C 1266 95.10 1413 accept 0 ALIGNMENT 41 YS2-10a15.q1k vc_3 442 402 2472 2512 C 41 100.00 442 reject_low 4 ALIGNMENT 352 YS2-10a15.q1k chr09 401 40 254126 254487 C 362 99.17 442 accept_chi 0 ALIGNMENT 0 YS2-10a15.q1k vc_3 401 62 2513 2512 C 340 0.00 442 reject_low 4 ALIGNMENT 0 YS2-10a15.q1k vc_5 403 62 37 36 C 342 0.00 442 reject_low 8 ALIGNMENT 39 YS2-10a15.q1k vc_5 442 404 5025 5063 C 39 100.00 442 reject_low 6 ALIGNMENT 38 YS2-10a15.q1k vc_7 405 442 13525 13562 F 38 100.00 442 reject_low 7 ALIGNMENT 41 YS2-10a15.q1k vc_1 442 402 2472 2512 C 41 100.00 442 reject_low 2 ALIGNMENT 41 YS2-10a15.q1k vc_4 402 442 5831 5871 F 41 100.00 442 reject_low 5 ALIGNMENT 0 YS2-10a15.q1k vc_1 401 62 2513 2512 C 340 0.00 442 reject_low 2 ALIGNMENT 0 YS2-10a15.q1k vc_7 62 404 13525 13524 F 343 0.00 442 reject_low 7 ALIGNMENT 0 YS2-10a15.q1k chr09 442 402 254127 254126 C 41 0.00 442 accept_chi 0 ALIGNMENT 348 YS2-10a15.p1k chr09 34 396 254126 254487 F 363 98.90 414 accept_chi 1 ALIGNMENT 0 YS2-10a15.q1k vc_5 403 62 5064 5063 C 342 0.00 442 reject_low 6 ALIGNMENT 0 YS2-10a15.q1k vc_4 62 401 5831 5830 F 340 0.00 442 reject_low 5 ALIGNMENT 41 YS2-10a15.q1k vc_2 442 402 2105 2145 C 41 100.00 442 reject_low 3 ALIGNMENT 0 YS2-10a15.p1k chr09 397 414 254487 254486 F 18 0.00 414 accept_chi 1 ALIGNMENT 36 YS2-10a15.q1k vc_5 439 404 1 36 C 36 100.00 442 reject_low 8 ALIGNMENT 0 YS2-10a15.q1k vc_2 401 62 2146 2145 C 340 0.00 442 reject_low 3 ALIGNMENT 896 YS2-10a16.q1k chr14 1087 42 762244 763306 C 1046 96.56 1290 accept 0 ALIGNMENT 1015 YS2-10a16.p1k chr14 35 1203 758743 759927 F 1169 96.41 1305 accept 0 ALIGNMENT 95 YS2-10a17.p1k chr07 1129 820 9590 9895 C 310 79.35 1345 reject_low 1 ALIGNMENT 0 YS2-10a17.p1k chr07 819 62 9896 9895 C 758 0.00 1345 reject_low 1 ALIGNMENT 944 YS2-10a17.q1k chr09 1155 40 432033 433162 C 1116 95.34 1284 accept 0 ALIGNMENT 1041 YS2-10a17.p1k chr09 30 1260 429697 430931 F 1231 96.18 1345 accept 0 ALIGNMENT 938 YS2-10a17.q1k chr07 40 1144 7414 8531 F 1105 95.38 1284 reject_low 1 ALIGNMENT 887 YS2-10a18.q1k chr11 1102 39 634568 635648 C 1064 95.86 1271 accept 0 ALIGNMENT 998 YS2-10a18.p1k chr11 24 1211 633647 634845 F 1188 94.78 1305 accept 0 ALIGNMENT 1001 YS2-10a19.p1k chr04 1187 38 1340040 1341199 C 1150 97.04 1302 accept 0 ALIGNMENT 1008 YS2-10a19.q1k chr04 40 1194 1335321 1336490 F 1155 96.36 1285 accept 0 ALIGNMENT 0 YS2-10a20.q1k chr07 838 902 835932 835931 F 65 0.00 1245 accept_chi 0 ALIGNMENT 117 YS2-10a20.q1k vc_4 877 1033 6353 6513 F 157 91.72 1245|1,0 reject_low 14 ALIGNMENT 0 YS2-10a20.q1k vc_4 876 62 1535 1534 C 815 0.00 1245 reject_low 15 ALIGNMENT 778 YS2-10a20.p1k chr07 828 32 835135 835932 C 797 99.75 1286 accept_chi 1 ALIGNMENT 41 YS2-10a20.q1k vc_3 877 834 2472 2515 C 44 97.73 1245 reject_low 18 ALIGNMENT 36 YS2-10a20.q1k vc_5 874 839 1 36 C 36 100.00 1245 reject_low 21 ALIGNMENT 41 YS2-10a20.q1k vc_1 877 834 2472 2515 C 44 97.73 1245 reject_low 16 ALIGNMENT 0 YS2-10a20.p1k vc_7 62 846 100 99 F 785 0.00 1286 reject_low 3 ALIGNMENT 0 YS2-10a20.p1k vc_3 846 62 2106 2105 C 785 0.00 1286 reject_low 6 ALIGNMENT 117 YS2-10a20.q1k vc_4 877 1033 126 286 F 157 91.72 1245 reject_low 13 ALIGNMENT 0 YS2-10a20.q1k vc_5 62 876 2398 2397 F 815 0.00 1245 reject_low 2 ALIGNMENT 0 YS2-10a20.q1k vc_4 62 833 5828 5827 F 772 0.00 1245 reject_low 14 ALIGNMENT 0 YS2-10a20.q1k vc_3 902 878 2473 2472 C 25 0.00 1245 reject_low 18 ALIGNMENT 127 YS2-10a20.q1k vc_4 1071 877 5607 5812 C 195 89.74 1245 reject_low 12 ALIGNMENT 783 YS2-10a20.q1k chr07 40 837 835135 835932 F 798 99.87 1245 accept_chi 0 ALIGNMENT 0 YS2-10a20.p1k chr07 868 829 835136 835135 C 40 0.00 1286 accept_chi 1 ALIGNMENT 231 YS2-10a20.p1k vc_2 1220 847 1713 2105 C 374 89.04 1286 reject_low 5 ALIGNMENT 0 YS2-10a20.q1k vc_1 902 878 2473 2472 C 25 0.00 1245 reject_low 16 ALIGNMENT 41 YS2-10a20.q1k vc_4 834 877 5828 5871 F 44 97.73 1245 reject_low 14 ALIGNMENT 0 YS2-10a20.q1k vc_7 876 62 2728 2727 C 815 0.00 1245 reject_low 3 ALIGNMENT 0 YS2-10a20.q1k vc_4 62 876 126 125 F 815 0.00 1245 reject_low 13 ALIGNMENT 0 YS2-10a20.q1k vc_1 62 876 2531 2530 F 815 0.00 1245 reject_low 9 ALIGNMENT 0 YS2-10a20.p1k vc_7 62 846 13562 13561 F 785 0.00 1286 reject_low 7 ALIGNMENT 0 YS2-10a20.p1k vc_1 846 62 2106 2105 C 785 0.00 1286 reject_low 4 ALIGNMENT 0 YS2-10a20.q1k vc_5 838 62 37 36 C 777 0.00 1245 reject_low 21 ALIGNMENT 0 YS2-10a20.q1k vc_7 62 839 13525 13524 F 778 0.00 1245 reject_low 20 ALIGNMENT 26 YS2-10a20.p1k vc_1 877 847 2441 2472 C 31 96.77 1286 reject_low 22 ALIGNMENT 78 YS2-10a20.q1k vc_4 964 877 1446 1534 C 88 96.59 1245 reject_low 15 ALIGNMENT 231 YS2-10a20.p1k vc_7 847 1220 13562 13954 F 374 89.04 1286 reject_low 7 ALIGNMENT 0 YS2-10a20.q1k vc_3 62 876 2531 2530 F 815 0.00 1245 reject_low 11 ALIGNMENT 227 YS2-10a20.p1k vc_4 847 1182 5871 6219 F 336 90.48 1286 reject_low 8 ALIGNMENT 26 YS2-10a20.p1k vc_3 877 847 2441 2472 C 31 96.77 1286 reject_low 23 ALIGNMENT 0 YS2-10a20.q1k vc_3 833 62 2516 2515 C 772 0.00 1245 reject_low 18 ALIGNMENT 39 YS2-10a20.q1k vc_5 877 839 5025 5063 C 39 100.00 1245 reject_low 19 ALIGNMENT 0 YS2-10a20.p1k vc_3 846 62 2473 2472 C 785 0.00 1286 reject_low 23 ALIGNMENT 0 YS2-10a20.q1k vc_4 876 62 5813 5812 C 815 0.00 1245 reject_low 12 ALIGNMENT 231 YS2-10a20.p1k vc_3 1220 847 1713 2105 C 374 89.04 1286 reject_low 6 ALIGNMENT 0 YS2-10a20.q1k vc_4 878 877 5872 6353 F 0 0.00 1245 reject_low 14 ALIGNMENT 0 YS2-10a20.q1k vc_2 902 878 2106 2105 C 25 0.00 1245 reject_low 17 ALIGNMENT 231 YS2-10a20.p1k vc_7 847 1220 100 492 F 374 89.04 1286 reject_low 3 ALIGNMENT 0 YS2-10a20.q1k vc_1 833 62 2516 2515 C 772 0.00 1245 reject_low 16 ALIGNMENT 0 YS2-10a20.p1k vc_4 62 846 5871 5870 F 785 0.00 1286 reject_low 8 ALIGNMENT 0 YS2-10a20.q1k vc_5 902 878 5026 5025 C 25 0.00 1245 reject_low 19 ALIGNMENT 127 YS2-10a20.q1k vc_5 877 1071 2398 2603 F 195 89.74 1245 reject_low 2 ALIGNMENT 231 YS2-10a20.p1k vc_5 1220 847 4633 5025 C 374 89.04 1286 reject_low 2 ALIGNMENT 127 YS2-10a20.q1k vc_1 877 1071 2531 2736 F 195 89.74 1245 reject_low 9 ALIGNMENT 127 YS2-10a20.q1k vc_3 877 1071 2531 2736 F 195 89.74 1245 reject_low 11 ALIGNMENT 0 YS2-10a20.p1k vc_5 846 62 5026 5025 C 785 0.00 1286 reject_low 2 ALIGNMENT 0 YS2-10a20.q1k vc_5 838 62 5064 5063 C 777 0.00 1245 reject_low 19 ALIGNMENT 0 YS2-10a20.q1k vc_7 878 902 13562 13561 F 25 0.00 1245 reject_low 20 ALIGNMENT 0 YS2-10a20.p1k vc_2 846 62 2106 2105 C 785 0.00 1286 reject_low 5 ALIGNMENT 127 YS2-10a20.q1k vc_7 1071 877 2522 2727 C 195 89.74 1245 reject_low 3 ALIGNMENT 0 YS2-10a20.q1k vc_2 833 62 2149 2148 C 772 0.00 1245 reject_low 17 ALIGNMENT 0 YS2-10a20.q1k vc_2 62 876 2164 2163 F 815 0.00 1245 reject_low 10 ALIGNMENT 38 YS2-10a20.q1k vc_7 840 877 13525 13562 F 38 100.00 1245 reject_low 20 ALIGNMENT 0 YS2-10a20.p1k vc_1 846 62 2473 2472 C 785 0.00 1286 reject_low 22 ALIGNMENT 0 YS2-10a20.q1k vc_5 902 875 2 1 C 28 0.00 1245 reject_low 21 ALIGNMENT 41 YS2-10a20.q1k vc_2 877 834 2105 2148 C 44 97.73 1245 reject_low 17 ALIGNMENT 231 YS2-10a20.p1k vc_1 1220 847 1713 2105 C 374 89.04 1286 reject_low 4 ALIGNMENT 127 YS2-10a20.q1k vc_2 877 1071 2164 2369 F 195 89.74 1245 reject_low 10 ALIGNMENT 0 YS2-10a21.p1k chr04 890 577 834002 834001 C 314 0.00 1246 reject_low 11 ALIGNMENT 0 YS2-10a21.p1k chr08 527 62 365471 365470 C 466 0.00 1246 reject_low 14 ALIGNMENT 0 YS2-10a21.q1k chr01 925 745 132301 132300 C 181 0.00 1354 reject_low 12 ALIGNMENT 0 YS2-10a21.q1k chr04 925 751 604238 604237 C 175 0.00 1354 reject_low 7 ALIGNMENT 24 YS2-10a21.q1k chr13 744 716 354193 354221 C 29 96.55 1354 reject_low 10 ALIGNMENT 0 YS2-10a21.p1k chr13 535 62 670437 670436 C 474 0.00 1246 reject_low 13 ALIGNMENT 0 YS2-10a21.p1k chr04 531 62 834046 834045 C 470 0.00 1246 reject_low 11 ALIGNMENT 22 YS2-10a21.p1k chr13 576 536 670396 670436 C 41 87.80 1246 reject_low 13 ALIGNMENT 0 YS2-10a21.q1k chr13 925 745 354194 354193 C 181 0.00 1354 reject_low 10 ALIGNMENT 0 YS2-10a21.p1k chr15 890 574 428004 428003 C 317 0.00 1246 reject_low 2 ALIGNMENT 948 YS2-10a21.p1k chr11 1163 33 239701 240858 C 1131 95.40 1246 accept 0 ALIGNMENT 21 YS2-10a21.p1k chr15 573 521 428003 428055 C 53 83.02 1246 reject_low 2 ALIGNMENT 0 YS2-10a21.q1k chr01 717 62 132327 132326 C 656 0.00 1354 reject_low 12 ALIGNMENT 0 YS2-10a21.q1k chr15 62 711 427928 427927 F 650 0.00 1354 reject_low 2 ALIGNMENT 27 YS2-10a21.p1k chr05 564 521 219941 219984 C 44 90.91 1246 reject_low 9 ALIGNMENT 0 YS2-10a21.p1k chr08 890 577 365366 365365 C 314 0.00 1246 reject_low 1 ALIGNMENT 30 YS2-10a21.q1k chr07 756 712 70162 70206 C 45 91.11 1354 reject_low 5 ALIGNMENT 37 YS2-10a21.p1k chr08 576 468 365365 365473 C 109 80.73 1246 reject_low 1 ALIGNMENT 22 YS2-10a21.q1k chr01 744 718 132300 132326 C 27 96.30 1354 reject_low 12 ALIGNMENT 21 YS2-10a21.p1k chr05 576 550 309001 309027 C 27 96.30 1246 reject_low 16 ALIGNMENT 0 YS2-10a21.p1k chr13 62 543 354193 354192 F 482 0.00 1246 reject_low 15 ALIGNMENT 0 YS2-10a21.q1k chr15 62 714 428003 428002 F 653 0.00 1354 reject_low 8 ALIGNMENT 0 YS2-10a21.q1k chr07 711 62 70207 70206 C 650 0.00 1354 reject_low 5 ALIGNMENT 0 YS2-10a21.p1k chr01 571 890 132326 132325 F 320 0.00 1246 reject_low 17 ALIGNMENT 21 YS2-10a21.p1k chr08 573 528 365425 365470 C 46 84.78 1246 reject_low 14 ALIGNMENT 0 YS2-10a21.p1k chr08 467 62 365474 365473 C 406 0.00 1246 reject_low 1 ALIGNMENT 0 YS2-10a21.p1k chr13 573 890 354221 354220 F 318 0.00 1246 reject_low 15 ALIGNMENT 27 YS2-10a21.p1k chr04 576 532 834001 834045 C 45 88.89 1246 reject_low 11 ALIGNMENT 21 YS2-10a21.q1k chr15 715 767 428003 428055 F 53 83.02 1354 reject_low 8 ALIGNMENT 0 YS2-10a21.p1k chr15 520 62 428056 428055 C 459 0.00 1246 reject_low 2 ALIGNMENT 24 YS2-10a21.p1k chr13 544 572 354193 354221 F 29 96.55 1246 reject_low 15 ALIGNMENT 0 YS2-10a21.p1k chr08 890 574 365426 365425 C 317 0.00 1246 reject_low 14 ALIGNMENT 23 YS2-10a21.p1k chr15 576 474 427928 428030 C 103 76.70 1246 reject_low 4 ALIGNMENT 0 YS2-10a21.q1k chr15 768 925 428055 428054 F 158 0.00 1354 reject_low 8 ALIGNMENT 0 YS2-10a21.q1k chr05 62 723 219941 219940 F 662 0.00 1354 reject_low 6 ALIGNMENT 23 YS2-10a21.q1k chr15 712 814 427928 428030 F 103 76.70 1354 reject_low 2 ALIGNMENT 0 YS2-10a21.q1k chr05 768 925 219984 219983 F 158 0.00 1354 reject_low 6 ALIGNMENT 0 YS2-10a21.p1k chr05 549 62 309028 309027 C 488 0.00 1246 reject_low 16 ALIGNMENT 22 YS2-10a21.p1k chr01 544 570 132300 132326 F 27 96.30 1246 reject_low 17 ALIGNMENT 0 YS2-10a21.p1k chr15 473 62 428031 428030 C 412 0.00 1246 reject_low 4 ALIGNMENT 21 YS2-10a21.q1k chr07 824 771 70163 70216 C 54 81.48 1354 reject_low 3 ALIGNMENT 0 YS2-10a21.p1k chr01 62 543 132300 132299 F 482 0.00 1246 reject_low 17 ALIGNMENT 0 YS2-10a21.q1k chr04 714 62 604273 604272 C 653 0.00 1354 reject_low 7 ALIGNMENT 0 YS2-10a21.p1k chr05 890 577 309002 309001 C 314 0.00 1246 reject_low 16 ALIGNMENT 0 YS2-10a21.p1k chr05 890 565 219942 219941 C 326 0.00 1246 reject_low 9 ALIGNMENT 0 YS2-10a21.q1k chr07 770 62 70217 70216 C 709 0.00 1354 reject_low 3 ALIGNMENT 0 YS2-10a21.p1k chr13 890 577 670397 670396 C 314 0.00 1246 reject_low 13 ALIGNMENT 935 YS2-10a21.q1k chr11 40 1179 239630 240789 F 1140 94.47 1354 accept 0 ALIGNMENT 0 YS2-10a21.p1k chr15 890 577 427929 427928 C 314 0.00 1246 reject_low 4 ALIGNMENT 27 YS2-10a21.q1k chr04 750 715 604237 604272 C 36 94.44 1354 reject_low 7 ALIGNMENT 0 YS2-10a21.q1k chr07 925 757 70163 70162 C 169 0.00 1354 reject_low 5 ALIGNMENT 0 YS2-10a21.q1k chr13 715 62 354222 354221 C 654 0.00 1354 reject_low 10 ALIGNMENT 0 YS2-10a21.p1k chr05 520 62 219985 219984 C 459 0.00 1246 reject_low 9 ALIGNMENT 0 YS2-10a21.q1k chr15 815 925 428030 428029 F 111 0.00 1354 reject_low 2 ALIGNMENT 27 YS2-10a21.q1k chr05 724 767 219941 219984 F 44 90.91 1354 reject_low 6 ALIGNMENT 0 YS2-10a21.q1k chr07 925 825 70164 70163 C 101 0.00 1354 reject_low 3 ALIGNMENT 989 YS2-10a24.p1k chr12 1161 31 524647 525783 C 1131 96.55 1175 accept 0 ALIGNMENT 989 YS2-10a24.q1k chr12 30 1160 520225 521359 F 1131 97.17 1167 accept 0 ALIGNMENT 859 YS2-10b01.q1k chr11 1197 37 476633 477787 C 1161 92.51 1298 accept 0 ALIGNMENT 1035 YS2-10b01.p1k chr11 41 1181 475685 476834 F 1141 97.11 1276 accept 0 ALIGNMENT 25 YS2-10b03.p1k chr15 203 171 1087038 1087070 C 33 93.94 532|0,5 reject_low 18,23 ALIGNMENT 22 YS2-10b03.p1k chr09 205 229 4603 4627 F 25 96.00 532 reject_low 12 ALIGNMENT 22 YS2-10b03.p1k chr12 229 205 1074024 1074048 C 25 96.00 532 reject_low 17,24 ALIGNMENT 0 YS2-10b03.p1k chr04 532 303 1527705 1527704 C 230 0.00 532 reject_low 16 ALIGNMENT 0 YS2-10b03.p1k chr09 129 128 4007 4471 F 0 0.00 532 reject_low 12 ALIGNMENT 0 YS2-10b03.p1k chr12 126 127 1067519 1067983 C 0 0.00 532 reject_low 25 ALIGNMENT 201 YS2-10b03.q1k chr06 385 42 2920 3255 C 344 87.79 1320 ambiguous_tel 3 ALIGNMENT 0 YS2-10b03.q1k chr12 243 261 1066710 1067248 F 19 0.00 1320 reject_low 24 ALIGNMENT 99 YS2-10b03.p1k chr12 128 30 1074645 1074743 C 99 100.00 532|2,0 reject_low 17,24 ALIGNMENT 22 YS2-10b03.p1k chr14 205 229 4215 4239 F 25 96.00 532 reject_low 10 ALIGNMENT 0 YS2-10b03.p1k chr05 204 204 4273 4297 F 1 0.00 532 reject_low 19 ALIGNMENT 25 YS2-10b03.p1k chr07 203 171 1086779 1086811 C 33 93.94 532|0,5 reject_low 15,21 ALIGNMENT 93 YS2-10b03.p1k chr09 30 128 3908 4006 F 99 97.98 532 reject_low 12 ALIGNMENT 0 YS2-10b03.p1k chr12 245 230 1073962 1074023 C 16 0.00 532 reject_low 17,24 ALIGNMENT 22 YS2-10b03.p1k chr12 229 205 1067361 1067385 C 25 96.00 532 reject_low 25 ALIGNMENT 22 YS2-10b03.p1k chr04 229 205 1527823 1527847 C 25 96.00 532 reject_low 16,22 ALIGNMENT 0 YS2-10b03.p1k chr12 303 303 1073303 1073904 C 1 0.00 532 reject_low 24 ALIGNMENT 25 YS2-10b03.p1k chr12 203 171 1074074 1074106 C 33 93.94 532|0,5 reject_low 17,24 ALIGNMENT 143 YS2-10b03.q1k chr14 242 42 4970 5168 C 201 91.04 1320 reject_low 10 ALIGNMENT 0 YS2-10b03.p1k chr16 230 245 4149 4210 F 16 0.00 532 reject_low 11 ALIGNMENT 0 YS2-10b03.p1k chr15 532 515 1086057 1086056 C 18 0.00 532 reject_low 23 ALIGNMENT 0 YS2-10b03.p1k chr16 176 175 4040 4070 F 0 0.00 532 reject_low 11 ALIGNMENT 0 YS2-10b03.p1k chr14 204 204 4190 4214 F 1 0.00 532 reject_low 10 ALIGNMENT 53 YS2-10b03.p1k chr12 180 125 1067465 1067520 C 56 98.21 532|5,2 reject_low 25 ALIGNMENT 477 YS2-10b03.p1k chr12 30 514 3737 4221 F 485 99.59 532 ambiguous_tel 0 ALIGNMENT 0 YS2-10b03.p1k chr13 515 532 4097 4096 F 18 0.00 532 ambiguous_tel 2 ALIGNMENT 25 YS2-10b03.p1k chr05 203 171 572702 572734 C 33 93.94 532|0,5 reject_low 14,20 ALIGNMENT 53 YS2-10b03.p1k chr04 302 246 1527704 1527760 C 57 98.25 532 reject_low 16,22 ALIGNMENT 204 YS2-10b03.q1k chr12 385 42 9418 9753 C 344 88.08 1320 ambiguous_tel 1 ALIGNMENT 0 YS2-10b03.p1k chr07 532 303 1086611 1086610 C 230 0.00 532 reject_low 15 ALIGNMENT 0 YS2-10b03.p1k chr12 532 451 1066573 1066572 C 82 0.00 532 reject_low 25 ALIGNMENT 0 YS2-10b03.p1k chr12 175 176 1067439 1067469 C 0 0.00 532 reject_low 25 ALIGNMENT 53 YS2-10b03.p1k chr15 302 246 1086869 1086925 C 57 98.25 532 reject_low 18,23 ALIGNMENT 25 YS2-10b03.p1k chr10 171 203 4528 4560 F 33 93.94 532|5,0 reject_low 13 ALIGNMENT 0 YS2-10b03.p1k chr07 245 230 1086667 1086728 C 16 0.00 532 reject_low 15,21 ALIGNMENT 0 YS2-10b03.p1k chr12 303 303 1066719 1067241 C 1 0.00 532 reject_low 25 ALIGNMENT 203 YS2-10b03.p1k chr09 304 514 5350 5560 F 211 99.05 532 reject_low 12 ALIGNMENT 0 YS2-10b03.p1k chr09 176 175 4519 4549 F 0 0.00 532 reject_low 12 ALIGNMENT 25 YS2-10b03.p1k chr09 171 203 4545 4577 F 33 93.94 532|5,0 reject_low 12 ALIGNMENT 93 YS2-10b03.p1k chr10 30 128 3891 3989 F 99 97.98 532 reject_low 13 ALIGNMENT 146 YS2-10b03.q1k chr10 242 42 5342 5540 C 201 91.54 1320 reject_low 13 ALIGNMENT 468 YS2-10b03.p1k chr02 30 514 3938 4422 F 485 98.97 532 ambiguous_tel 5 ALIGNMENT 0 YS2-10b03.p1k chr15 175 176 1087066 1087096 C 0 0.00 532 reject_low 18,23 ALIGNMENT 25 YS2-10b03.p1k chr05 171 203 4240 4272 F 33 93.94 532|5,0 reject_low 19 ALIGNMENT 0 YS2-10b03.p1k chr05 451 532 5111 5110 F 82 0.00 532 reject_low 19 ALIGNMENT 0 YS2-10b03.p1k chr12 532 515 1073093 1073092 C 18 0.00 532 reject_low 24 ALIGNMENT 477 YS2-10b03.p1k chr16 514 30 943956 944440 C 485 99.59 532 reject_low 6 ALIGNMENT 53 YS2-10b03.p1k chr14 246 302 4302 4358 F 57 98.25 532 reject_low 10 ALIGNMENT 0 YS2-10b03.p1k chr10 129 128 3990 4454 F 0 0.00 532 reject_low 13 ALIGNMENT 99 YS2-10b03.p1k chr16 30 128 3429 3527 F 99 100.00 532|0,2 reject_low 11 ALIGNMENT 99 YS2-10b03.p1k chr05 30 128 3584 3682 F 99 100.00 532|0,2 reject_low 19 ALIGNMENT 22 YS2-10b03.p1k chr05 205 229 4298 4322 F 25 96.00 532 reject_low 19 ALIGNMENT 22 YS2-10b03.p1k chr16 205 229 4124 4148 F 25 96.00 532 reject_low 11 ALIGNMENT 0 YS2-10b03.p1k chr04 175 176 1527901 1527931 C 0 0.00 532 reject_low 16,22 ALIGNMENT 99 YS2-10b03.p1k chr04 128 30 1528444 1528542 C 99 100.00 532|2,0 reject_low 16,22 ALIGNMENT 99 YS2-10b03.p1k chr15 128 30 1087609 1087707 C 99 100.00 532|2,0 reject_low 18,23 ALIGNMENT 0 YS2-10b03.p1k chr08 515 532 3953 3952 F 18 0.00 532 ambiguous_tel 4 ALIGNMENT 0 YS2-10b03.p1k chr12 175 176 1074102 1074132 C 0 0.00 532 reject_low 17,24 ALIGNMENT 474 YS2-10b03.p1k chr13 30 514 3613 4097 F 485 99.38 532 ambiguous_tel 2 ALIGNMENT 0 YS2-10b03.p1k chr02 515 532 4422 4421 F 18 0.00 532 ambiguous_tel 5 ALIGNMENT 50 YS2-10b03.p1k chr05 180 125 572756 572811 C 56 96.43 532|5,2 reject_low 14,20 ALIGNMENT 200 YS2-10b03.p1k chr14 304 514 4961 5171 F 211 98.58 532 reject_low 10 ALIGNMENT 474 YS2-10b03.p1k chr06 30 514 2774 3258 F 485 99.38 532 ambiguous_tel 3 ALIGNMENT 22 YS2-10b03.p1k chr10 205 229 4586 4610 F 25 96.00 532 reject_low 13 ALIGNMENT 140 YS2-10b03.q1k chr04 42 242 1526894 1527092 F 201 90.55 1320 reject_low 16 ALIGNMENT 0 YS2-10b03.p1k chr14 303 303 4359 4960 F 1 0.00 532 reject_low 10 ALIGNMENT 0 YS2-10b03.p1k chr15 204 204 1087013 1087037 C 1 0.00 532 reject_low 18,23 ALIGNMENT 0 YS2-10b03.p1k chr12 515 532 4221 4220 F 18 0.00 532 ambiguous_tel 0 ALIGNMENT 53 YS2-10b03.p1k chr16 246 302 4211 4267 F 57 98.25 532 reject_low 11 ALIGNMENT 0 YS2-10b03.p1k chr12 532 303 1073906 1073905 C 230 0.00 532 reject_low 17 ALIGNMENT 0 YS2-10b03.p1k chr05 245 230 572590 572651 C 16 0.00 532 reject_low 14,20 ALIGNMENT 0 YS2-10b03.p1k chr16 127 126 3526 3990 F 0 0.00 532 reject_low 11 ALIGNMENT 94 YS2-10b03.q1k chr12 104 242 1066572 1066709 F 139 89.93 1320 reject_low 24 ALIGNMENT 0 YS2-10b03.p1k chr16 204 204 4099 4123 F 1 0.00 532 reject_low 11 ALIGNMENT 0 YS2-10b03.p1k chr04 245 230 1527761 1527822 C 16 0.00 532 reject_low 16,22 ALIGNMENT 204 YS2-10b03.q1k chr12 385 42 3883 4218 C 344 88.08 1320 ambiguous_tel 0 ALIGNMENT 0 YS2-10b03.p1k chr14 515 532 5171 5170 F 18 0.00 532 reject_low 10 ALIGNMENT 0 YS2-10b03.p1k chr16 303 303 4268 4869 F 1 0.00 532 reject_low 11 ALIGNMENT 25 YS2-10b03.p1k chr14 171 203 4157 4189 F 33 93.94 532|5,0 reject_low 10 ALIGNMENT 0 YS2-10b03.p1k chr07 175 176 1086807 1086837 C 0 0.00 532 reject_low 15,21 ALIGNMENT 0 YS2-10b03.p1k chr05 303 303 571931 572532 C 1 0.00 532 reject_low 20 ALIGNMENT 50 YS2-10b03.p1k chr07 180 125 1086833 1086888 C 56 96.43 532|5,2 reject_low 15,21 ALIGNMENT 0 YS2-10b03.p1k chr04 204 204 1527848 1527872 C 1 0.00 532 reject_low 16,22 ALIGNMENT 0 YS2-10b03.p1k chr12 204 204 1067386 1067410 C 1 0.00 532 reject_low 25 ALIGNMENT 141 YS2-10b03.p1k chr05 304 450 4965 5111 F 147 99.32 532 reject_low 19 ALIGNMENT 0 YS2-10b03.p1k chr12 245 230 1067299 1067360 C 16 0.00 532 reject_low 25 ALIGNMENT 50 YS2-10b03.p1k chr14 125 180 4080 4135 F 56 96.43 532|2,5 reject_low 10 ALIGNMENT 25 YS2-10b03.p1k chr16 171 203 4066 4098 F 33 93.94 532|5,0 reject_low 11 ALIGNMENT 0 YS2-10b03.p1k chr09 303 303 4747 5349 F 1 0.00 532 reject_low 12 ALIGNMENT 0 YS2-10b03.p1k chr05 127 126 3681 4164 F 0 0.00 532 reject_low 19 ALIGNMENT 0 YS2-10b03.p1k chr04 532 515 1526892 1526891 C 18 0.00 532 reject_low 22 ALIGNMENT 50 YS2-10b03.p1k chr16 125 180 3989 4044 F 56 96.43 532|2,5 reject_low 11 ALIGNMENT 99 YS2-10b03.p1k chr12 128 30 1067982 1068080 C 99 100.00 532|2,0 reject_low 25 ALIGNMENT 0 YS2-10b03.p1k chr12 515 532 9756 9755 F 18 0.00 532 ambiguous_tel 1 ALIGNMENT 195 YS2-10b03.q1k chr08 42 385 558412 558747 F 344 87.50 1320 reject_low 9 ALIGNMENT 0 YS2-10b03.p1k chr10 176 175 4502 4532 F 0 0.00 532 reject_low 13 ALIGNMENT 0 YS2-10b03.p1k chr09 515 532 5560 5559 F 18 0.00 532 reject_low 12 ALIGNMENT 0 YS2-10b03.p1k chr07 204 204 1086754 1086778 C 1 0.00 532 reject_low 15,21 ALIGNMENT 140 YS2-10b03.q1k chr12 42 242 1073095 1073293 F 201 90.55 1320 reject_low 17 ALIGNMENT 0 YS2-10b03.p1k chr05 175 176 572730 572760 C 0 0.00 532 reject_low 14,20 ALIGNMENT 25 YS2-10b03.p1k chr04 203 171 1527873 1527905 C 33 93.94 532|0,5 reject_low 16,22 ALIGNMENT 0 YS2-10b03.p1k chr10 303 303 4730 5332 F 1 0.00 532 reject_low 13 ALIGNMENT 140 YS2-10b03.q1k chr15 42 242 1086059 1086257 F 201 90.55 1320 reject_low 18 ALIGNMENT 0 YS2-10b03.p1k chr15 303 303 1086267 1086868 C 1 0.00 532 reject_low 23 ALIGNMENT 0 YS2-10b03.p1k chr12 204 204 1074049 1074073 C 1 0.00 532 reject_low 17,24 ALIGNMENT 141 YS2-10b03.p1k chr12 450 304 1066572 1066718 C 147 99.32 532 reject_low 25 ALIGNMENT 50 YS2-10b03.p1k chr04 180 125 1527927 1527982 C 56 96.43 532|5,2 reject_low 16,22 ALIGNMENT 143 YS2-10b03.q1k chr16 242 42 4879 5077 C 201 91.04 1320 reject_low 11 ALIGNMENT 53 YS2-10b03.p1k chr05 246 302 4385 4441 F 57 98.25 532 reject_low 19 ALIGNMENT 53 YS2-10b03.p1k chr09 246 302 4690 4746 F 57 98.25 532 reject_low 12 ALIGNMENT 99 YS2-10b03.p1k chr07 128 30 1087350 1087448 C 99 100.00 532|2,0 reject_low 15,21 ALIGNMENT 0 YS2-10b03.p1k chr14 176 175 4131 4161 F 0 0.00 532 reject_low 10 ALIGNMENT 474 YS2-10b03.p1k chr08 30 514 3469 3953 F 485 99.38 532 ambiguous_tel 4 ALIGNMENT 25 YS2-10b03.p1k chr12 203 171 1067411 1067443 C 33 93.94 532|0,5 reject_low 25 ALIGNMENT 53 YS2-10b03.p1k chr05 302 246 572533 572589 C 57 98.25 532 reject_low 14,20 ALIGNMENT 0 YS2-10b03.p1k chr05 303 303 4442 4964 F 1 0.00 532 reject_low 19 ALIGNMENT 200 YS2-10b03.p1k chr16 304 514 4870 5080 F 211 98.58 532 reject_low 11 ALIGNMENT 0 YS2-10b03.p1k chr07 303 303 1086008 1086609 C 1 0.00 532 reject_low 21 ALIGNMENT 0 YS2-10b03.p1k chr06 515 532 3258 3257 F 18 0.00 532 ambiguous_tel 3 ALIGNMENT 99 YS2-10b03.p1k chr14 30 128 3520 3618 F 99 100.00 532|0,2 reject_low 10 ALIGNMENT 99 YS2-10b03.p1k chr05 128 30 573273 573371 C 99 100.00 532|2,0 reject_low 14,20 ALIGNMENT 0 YS2-10b03.p1k chr14 230 245 4240 4301 F 16 0.00 532 reject_low 10 ALIGNMENT 195 YS2-10b03.q1k chr02 385 42 4084 4419 C 344 87.21 1320 ambiguous_tel 5 ALIGNMENT 0 YS2-10b03.p1k chr09 230 245 4628 4689 F 16 0.00 532 reject_low 12 ALIGNMENT 477 YS2-10b03.p1k chr12 30 514 9272 9756 F 485 99.59 532 ambiguous_tel 1 ALIGNMENT 0 YS2-10b03.p1k chr08 532 515 558410 558409 C 18 0.00 532 reject_low 7 ALIGNMENT 0 YS2-10b03.p1k chr07 532 515 1085798 1085797 C 18 0.00 532 reject_low 21 ALIGNMENT 50 YS2-10b03.p1k chr09 128 180 4471 4523 F 53 98.11 532|1,5 reject_low 12 ALIGNMENT 0 YS2-10b03.p1k chr15 532 303 1086870 1086869 C 230 0.00 532 reject_low 18 ALIGNMENT 0 YS2-10b03.p1k chr09 204 204 4578 4602 F 1 0.00 532 reject_low 12 ALIGNMENT 0 YS2-10b03.p1k chr05 126 127 572810 573274 C 0 0.00 532 reject_low 14,20 ALIGNMENT 0 YS2-10b03.p1k chr05 532 303 572534 572533 C 230 0.00 532 reject_low 14 ALIGNMENT 0 YS2-10b03.p1k chr10 230 245 4611 4672 F 16 0.00 532 reject_low 13 ALIGNMENT 201 YS2-10b03.q1k chr08 385 42 3615 3950 C 344 87.79 1320 ambiguous_tel 4 ALIGNMENT 0 YS2-10b03.p1k chr15 126 127 1087146 1087610 C 0 0.00 532 reject_low 18,23 ALIGNMENT 50 YS2-10b03.p1k chr12 180 125 1074128 1074183 C 56 96.43 532|5,2 reject_low 17,24 ALIGNMENT 203 YS2-10b03.p1k chr10 304 514 5333 5543 F 211 99.05 532 reject_low 13 ALIGNMENT 0 YS2-10b03.p1k chr16 532 515 943957 943956 C 18 0.00 532 reject_low 6 ALIGNMENT 21 YS2-10b03.q1k chr12 262 312 1067249 1067298 F 51 84.31 1320 reject_low 24 ALIGNMENT 204 YS2-10b03.q1k chr13 385 42 3759 4094 C 344 88.08 1320 ambiguous_tel 2 ALIGNMENT 0 YS2-10b03.p1k chr04 126 127 1527981 1528445 C 0 0.00 532 reject_low 16,22 ALIGNMENT 53 YS2-10b03.p1k chr10 246 302 4673 4729 F 57 98.25 532 reject_low 13 ALIGNMENT 53 YS2-10b03.p1k chr05 125 180 4163 4218 F 56 98.21 532|2,5 reject_low 19 ALIGNMENT 94 YS2-10b03.q1k chr05 242 104 4974 5111 C 139 89.93 1320 reject_low 19 ALIGNMENT 197 YS2-10b03.p1k chr15 514 304 1086056 1086266 C 211 98.10 532 reject_low 23 ALIGNMENT 143 YS2-10b03.q1k chr07 42 242 1085800 1085998 F 201 91.04 1320 reject_low 15 ALIGNMENT 197 YS2-10b03.p1k chr04 514 304 1526891 1527101 C 211 98.10 532 reject_low 22 ALIGNMENT 0 YS2-10b03.p1k chr05 204 204 572677 572701 C 1 0.00 532 reject_low 14,20 ALIGNMENT 146 YS2-10b03.q1k chr09 242 42 5359 5557 C 201 91.54 1320 reject_low 12 ALIGNMENT 0 YS2-10b03.p1k chr10 204 204 4561 4585 F 1 0.00 532 reject_low 13 ALIGNMENT 197 YS2-10b03.p1k chr12 514 304 1073092 1073302 C 211 98.10 532 reject_low 24 ALIGNMENT 0 YS2-10b03.p1k chr16 515 532 5080 5079 F 18 0.00 532 reject_low 11 ALIGNMENT 22 YS2-10b03.p1k chr07 229 205 1086729 1086753 C 25 96.00 532 reject_low 15,21 ALIGNMENT 22 YS2-10b03.p1k chr05 229 205 572652 572676 C 25 96.00 532 reject_low 14,20 ALIGNMENT 0 YS2-10b03.p1k chr07 126 127 1086887 1087351 C 0 0.00 532 reject_low 15,21 ALIGNMENT 204 YS2-10b03.q1k chr16 42 385 943959 944294 F 344 88.37 1320 reject_low 8 ALIGNMENT 0 YS2-10b03.p1k chr05 230 245 4323 4384 F 16 0.00 532 reject_low 19 ALIGNMENT 22 YS2-10b03.p1k chr15 229 205 1086988 1087012 C 25 96.00 532 reject_low 18,23 ALIGNMENT 53 YS2-10b03.p1k chr07 302 246 1086610 1086666 C 57 98.25 532 reject_low 15,21 ALIGNMENT 0 YS2-10b03.p1k chr12 126 127 1074182 1074646 C 0 0.00 532 reject_low 17,24 ALIGNMENT 200 YS2-10b03.p1k chr07 514 304 1085797 1086007 C 211 98.58 532 reject_low 21 ALIGNMENT 200 YS2-10b03.p1k chr05 514 304 571720 571930 C 211 98.58 532 reject_low 20 ALIGNMENT 53 YS2-10b03.p1k chr12 302 246 1067242 1067298 C 57 98.25 532 reject_low 25 ALIGNMENT 468 YS2-10b03.p1k chr08 514 30 558409 558893 C 485 98.97 532 reject_low 7 ALIGNMENT 0 YS2-10b03.p1k chr14 127 126 3617 4081 F 0 0.00 532 reject_low 10 ALIGNMENT 0 YS2-10b03.p1k chr05 532 515 571721 571720 C 18 0.00 532 reject_low 20 ALIGNMENT 0 YS2-10b03.p1k chr05 176 175 4214 4244 F 0 0.00 532 reject_low 19 ALIGNMENT 53 YS2-10b03.p1k chr12 302 246 1073905 1073961 C 57 98.25 532 reject_low 17,24 ALIGNMENT 0 YS2-10b03.p1k chr15 245 230 1086926 1086987 C 16 0.00 532 reject_low 18,23 ALIGNMENT 143 YS2-10b03.q1k chr05 42 242 571723 571921 F 201 91.04 1320 reject_low 14 ALIGNMENT 50 YS2-10b03.p1k chr15 180 125 1087092 1087147 C 56 96.43 532|5,2 reject_low 18,23 ALIGNMENT 0 YS2-10b03.p1k chr04 303 303 1527102 1527703 C 1 0.00 532 reject_low 22 ALIGNMENT 50 YS2-10b03.p1k chr10 128 180 4454 4506 F 53 98.11 532|1,5 reject_low 13 ALIGNMENT 0 YS2-10b03.p1k chr10 515 532 5543 5542 F 18 0.00 532 reject_low 13 ALIGNMENT 872 YS2-10b04.p1k chr09 1242 40 315242 316451 C 1203 92.52 1284 accept 0 ALIGNMENT 984 YS2-10b04.q1k chr09 36 1162 314068 315198 F 1127 96.89 1284 accept 0 ALIGNMENT 165 YS2-10b05.p1k chr10 34 216 663769 663951 F 183 99.45 223 accept 0 ALIGNMENT 1050 YS2-10b06.p1k chr02 32 1243 782003 783213 F 1212 95.87 1315 accept 0 ALIGNMENT 1003 YS2-10b06.q1k chr02 1177 40 785092 786236 C 1138 96.92 1320 accept 0 ALIGNMENT 611 YS2-10b07.q1k chr01 675 39 97037 97674 C 637 99.84 679 accept_chi 1 ALIGNMENT 0 YS2-10b07.p1k chr01 670 686 97674 97673 F 17 0.00 686 accept_chi 0 ALIGNMENT 611 YS2-10b07.p1k chr01 33 669 97037 97674 F 637 99.84 686 accept_chi 0 ALIGNMENT 1072 YS2-10b08.p1k chr16 1267 31 72487 73732 C 1237 96.28 1336 accept_chi 0 ALIGNMENT 1070 YS2-10b08.q1k chr16 40 1270 72487 73724 F 1231 96.67 1304 accept_chi 1 ALIGNMENT 0 YS2-10b09.p1k chr08 299 281 54681 54680 C 19 0.00 299 accept 0 ALIGNMENT 231 YS2-10b09.p1k chr08 280 30 54680 54930 C 251 99.60 299 accept 0 ALIGNMENT 717 YS2-10b10.q1k chr07 38 963 147675 148600 F 926 94.06 1197 accept 0 ALIGNMENT 158 YS2-10b10.q1k chr05 957 599 423948 424307 C 359 82.45 1197 reject_low 1 ALIGNMENT 0 YS2-10b10.q1k chr05 598 107 424308 424307 C 492 0.00 1197 reject_low 1 ALIGNMENT 988 YS2-10b11.p1k chr15 1134 31 465298 466405 C 1104 97.46 1287 accept 0 ALIGNMENT 993 YS2-10b12.p1k chr07 1237 33 150594 151810 C 1205 95.19 1321 accept 0 ALIGNMENT 0 YS2-10b12.q1k chr05 671 62 424308 424307 C 610 0.00 1273 reject_low 1 ALIGNMENT 915 YS2-10b12.q1k chr07 39 1113 147600 148685 F 1075 96.19 1273 accept 0 ALIGNMENT 235 YS2-10b12.q1k chr05 1029 672 423948 424307 C 358 88.27 1273 reject_low 1 ALIGNMENT 1009 YS2-10b13.p1k chr08 1225 28 79247 80449 C 1198 96.41 1384 accept 0 ALIGNMENT 487 YS2-10b14.p1k chr09 1158 244 433441 434362 C 915 85.25 1353 reject_low 12 ALIGNMENT 0 YS2-10b14.p1k chr07 187 62 1080791 1080790 C 126 0.00 1353 reject_low 15 ALIGNMENT 20 YS2-10b14.p1k chr04 974 925 1522931 1522980 C 50 82.00 1353 reject_low 18 ALIGNMENT 360 YS2-10b14.p1k chr15 1041 49 1082468 1083472 C 993 80.56 1353 reject_low 13 ALIGNMENT 0 YS2-10b14.p1k chr05 878 691 63711 63710 C 188 0.00 1353 reject_low 17 ALIGNMENT 360 YS2-10b14.p1k chr16 118 1041 7745 8673 F 924 81.28 1353 reject_low 20 ALIGNMENT 0 YS2-10b14.p1k chr08 62 278 11890 11889 F 217 0.00 1353 reject_low 11 ALIGNMENT 620 YS2-10b14.p1k chr11 39 1144 1535 2652 F 1106 86.35 1353 reject_low 9 ALIGNMENT 0 YS2-10b14.p1k chr07 62 216 6195 6194 F 155 0.00 1353 reject_low 7 ALIGNMENT 0 YS2-10b14.p1k chr02 878 774 808951 808950 C 105 0.00 1353 reject_low 14 ALIGNMENT 732 YS2-10b14.p1k chr01 43 1217 1534 2717 F 1175 88.68 1353 reject_low 5 ALIGNMENT 834 YS2-10b14.p1k chr12 39 1154 12812 13929 F 1116 92.20 1353 reject_low 6 ALIGNMENT 59 YS2-10b14.p1k chr03 699 502 289999 290193 C 198 78.79 1353 reject_low 21 ALIGNMENT 592 YS2-10b14.p1k chr03 1230 170 307228 308309 C 1061 86.33 1353 reject_low 8 ALIGNMENT 0 YS2-10b14.p1k chr16 97 117 7717 7744 F 21 0.00 1353 reject_low 20 ALIGNMENT 0 YS2-10b14.p1k chr01 683 878 177031 177030 F 196 0.00 1353 reject_low 19 ALIGNMENT 25 YS2-10b14.p1k chr16 54 96 7674 7716 F 43 88.37 1353 reject_low 20 ALIGNMENT 810 YS2-10b14.p1k chr10 39 1230 8497 9704 F 1192 90.35 1353 reject_low 2 ALIGNMENT 553 YS2-10b14.p1k chr08 279 1138 11890 12755 F 860 88.95 1353 reject_low 11 ALIGNMENT 879 YS2-10b14.p1k chr02 39 1105 7334 8402 F 1067 94.75 1353 reject_low 4 ALIGNMENT 810 YS2-10b14.p1k chr09 39 1230 8514 9721 F 1192 90.35 1353 reject_low 1 ALIGNMENT 862 YS2-10b14.p1k chr14 1158 39 781432 782551 C 1120 93.21 1353 reject_low 3 ALIGNMENT 0 YS2-10b14.p1k chr13 117 62 923203 923202 C 56 0.00 1353 reject_low 16 ALIGNMENT 508 YS2-10b14.p1k chr04 704 39 1523200 1523874 C 666 92.94 1353 reject_low 18 ALIGNMENT 0 YS2-10b14.p1k chr05 309 62 64091 64090 C 248 0.00 1353 reject_low 17 ALIGNMENT 0 YS2-10b14.p1k chr03 878 700 290000 289999 C 179 0.00 1353 reject_low 21 ALIGNMENT 405 YS2-10b14.p1k chr07 773 188 1080211 1080790 C 586 90.61 1353 reject_low 15 ALIGNMENT 767 YS2-10b14.p1k chr12 1153 40 1062440 1063546 C 1114 90.84 1353 accept 0 ALIGNMENT 979 YS2-10b14.q1k chr12 34 1197 1058226 1059397 F 1164 96.13 1238 accept 0 ALIGNMENT 215 YS2-10b14.p1k chr01 286 682 176631 177031 F 397 85.64 1353 reject_low 19 ALIGNMENT 0 YS2-10b14.p1k chr09 243 62 434363 434362 C 182 0.00 1353 reject_low 12 ALIGNMENT 594 YS2-10b14.p1k chr15 39 972 11280 12209 F 934 89.08 1353 reject_low 10 ALIGNMENT 348 YS2-10b14.p1k chr13 1041 118 922275 923202 C 924 81.06 1353 reject_low 16 ALIGNMENT 644 YS2-10b14.p1k chr07 217 1217 6195 7202 F 1001 89.11 1353 reject_low 7 ALIGNMENT 0 YS2-10b14.p1k chr02 187 62 809535 809534 C 126 0.00 1353 reject_low 14 ALIGNMENT 0 YS2-10b14.p1k chr03 501 62 290194 290193 C 440 0.00 1353 reject_low 21 ALIGNMENT 0 YS2-10b14.p1k chr01 62 285 176631 176630 F 224 0.00 1353 reject_low 19 ALIGNMENT 0 YS2-10b14.p1k chr04 924 705 1522981 1523199 C 220 0.00 1353 reject_low 18 ALIGNMENT 0 YS2-10b14.p1k chr07 878 774 1080212 1080211 C 105 0.00 1353 reject_low 15 ALIGNMENT 408 YS2-10b14.p1k chr02 773 188 808950 809534 C 586 90.61 1353 reject_low 14 ALIGNMENT 0 YS2-10b14.p1k chr03 169 62 308310 308309 C 108 0.00 1353 reject_low 8 ALIGNMENT 324 YS2-10b14.p1k chr05 690 310 63710 64090 C 381 95.28 1353 reject_low 17 ALIGNMENT 1031 YS2-10b17.q1k chr02 40 1283 777232 778488 F 1244 95.90 1301 accept 0 ALIGNMENT 1025 YS2-10b17.p1k chr02 1246 30 780701 781922 C 1217 95.56 1343 accept 0 ALIGNMENT 27 YS2-10b18.q1k chr16 838 808 405138 405168 C 31 96.77 1301 reject_low 1 ALIGNMENT 428 YS2-10b18.q1k chr16 599 34 405453 406019 C 566 92.23 1301 reject_low 1 ALIGNMENT 0 YS2-10b18.q1k chr16 807 600 405169 405452 C 208 0.00 1301 reject_low 1 ALIGNMENT 975 YS2-10b18.p1k chr02 29 1253 602262 603486 F 1225 94.29 1336 accept 0 ALIGNMENT 1058 YS2-10b18.q1k chr02 1284 29 604235 605492 C 1256 95.70 1301 accept 0 ALIGNMENT 984 YS2-10b19.p1k chr07 30 1241 173670 174867 F 1212 95.13 1346 accept 0 ALIGNMENT 995 YS2-10b19.q1k chr07 1291 38 175038 176270 C 1254 94.74 1312 accept 0 ALIGNMENT 991 YS2-10b20.q1k chr12 27 1229 947574 948781 F 1203 94.93 1253 accept 0 ALIGNMENT 1041 YS2-10b20.p1k chr12 1251 37 952338 953566 C 1215 96.05 1293 accept 0 ALIGNMENT 38 YS2-10b21.q1k vc_7 306 343 13525 13562 F 38 100.00 343 reject_low 6 ALIGNMENT 0 YS2-10b21.q1k vc_5 304 62 5064 5063 C 243 0.00 343 reject_low 5 ALIGNMENT 269 YS2-10b21.p1k chr15 307 34 100343 100616 C 274 100.00 326 accept_chi 0 ALIGNMENT 0 YS2-10b21.q1k vc_5 304 62 37 36 C 243 0.00 343 reject_low 7 ALIGNMENT 0 YS2-10b21.q1k chr15 304 343 100620 100619 F 40 0.00 343 accept_chi 1 ALIGNMENT 0 YS2-10b21.q1k vc_1 303 62 2512 2511 C 242 0.00 343 reject_low 2 ALIGNMENT 40 YS2-10b21.q1k vc_1 343 304 2472 2511 C 40 100.00 343 reject_low 2 ALIGNMENT 261 YS2-10b21.q1k chr15 31 303 100346 100620 F 273 99.27 343 accept_chi 1 ALIGNMENT 39 YS2-10b21.q1k vc_5 343 305 5025 5063 C 39 100.00 343 reject_low 5 ALIGNMENT 40 YS2-10b21.q1k vc_3 343 304 2472 2511 C 40 100.00 343 reject_low 3 ALIGNMENT 40 YS2-10b21.q1k vc_4 304 343 5832 5871 F 40 100.00 343 reject_low 4 ALIGNMENT 0 YS2-10b21.q1k vc_4 62 303 5832 5831 F 242 0.00 343 reject_low 4 ALIGNMENT 0 YS2-10b21.p1k chr15 326 308 100344 100343 C 19 0.00 326 accept_chi 0 ALIGNMENT 36 YS2-10b21.q1k vc_5 340 305 1 36 C 36 100.00 343 reject_low 7 ALIGNMENT 0 YS2-10b21.q1k vc_7 62 305 13525 13524 F 244 0.00 343 reject_low 6 ALIGNMENT 0 YS2-10b21.q1k vc_3 303 62 2512 2511 C 242 0.00 343 reject_low 3 ALIGNMENT 302 YS2-10b22.q1k vc_2 1 303 2322 2624 F 303 100.00 855 reject_low 10 ALIGNMENT 515 YS2-10b22.q1k vc_5 1 652 2556 3210 F 652 92.33 855 reject_vc 0 ALIGNMENT 256 YS2-10b22.p1k vc_6 1 446 3712 4164 F 446 87.00 475 reject_low 5 ALIGNMENT 206 YS2-10b22.q1k vc_4 308 652 1879 2226 F 345 85.51 855 reject_low 8 ALIGNMENT 108 YS2-10b22.q1k vc_7 413 305 4591 4699 C 109 100.00 855 reject_low 12 ALIGNMENT 515 YS2-10b22.q1k vc_7 652 1 1915 2569 C 652 92.33 855 reject_vc 1 ALIGNMENT 256 YS2-10b22.p1k vc_2 446 1 1297 1749 C 446 87.00 475 reject_low 3 ALIGNMENT 0 YS2-10b22.q1k vc_4 400 305 6274 6273 C 96 0.00 855 reject_low 14 ALIGNMENT 65 YS2-10b22.q1k vc_4 238 304 1548 1614 F 67 100.00 855 reject_low 8 ALIGNMENT 0 YS2-10b22.q1k vc_4 305 307 1615 1878 F 3 0.00 855 reject_low 8 ALIGNMENT 0 YS2-10b22.q1k vc_7 53 54 5172 6360 C 0 0.00 855 reject_low 12 ALIGNMENT 302 YS2-10b22.q1k vc_3 1 303 2689 2991 F 303 100.00 855 reject_low 11 ALIGNMENT 0 YS2-10b22.q1k vc_4 400 305 47 46 C 96 0.00 855 reject_low 13 ALIGNMENT 405 YS2-10b22.q1k vc_4 413 1 5240 5654 C 413 99.52 855 reject_low 7 ALIGNMENT 0 YS2-10b22.q1k vc_2 304 400 2624 2623 F 97 0.00 855 reject_low 10 ALIGNMENT 247 YS2-10b22.q1k vc_7 303 53 4922 5172 C 251 99.60 855|0,1 reject_low 12 ALIGNMENT 0 YS2-10b22.q1k vc_3 304 400 2991 2990 F 97 0.00 855 reject_low 11 ALIGNMENT 250 YS2-10b22.p1k vc_7 1 446 456 908 F 446 86.55 475 reject_vc 1 ALIGNMENT 65 YS2-10b22.q1k vc_4 304 238 6273 6339 C 67 100.00 855 reject_low 14 ALIGNMENT 0 YS2-10b22.q1k vc_4 62 237 1548 1547 F 176 0.00 855 reject_low 8 ALIGNMENT 250 YS2-10b22.p1k vc_7 1 446 13918 14370 F 446 86.55 475 reject_low 6 ALIGNMENT 256 YS2-10b22.p1k vc_1 446 1 1297 1749 C 446 87.00 475 reject_low 2 ALIGNMENT 0 YS2-10b22.q1k vc_4 237 62 113 112 C 176 0.00 855 reject_low 13 ALIGNMENT 0 YS2-10b22.q1k vc_1 304 400 2991 2990 F 97 0.00 855 reject_low 9 ALIGNMENT 0 YS2-10b22.q1k vc_4 237 62 6340 6339 C 176 0.00 855 reject_low 14 ALIGNMENT 65 YS2-10b22.q1k vc_4 304 238 46 112 C 67 100.00 855 reject_low 13 ALIGNMENT 51 YS2-10b22.q1k vc_7 54 3 6360 6411 C 52 100.00 855|1,0 reject_low 12 ALIGNMENT 302 YS2-10b22.q1k vc_1 1 303 2689 2991 F 303 100.00 855 reject_low 9 ALIGNMENT 0 YS2-10b22.q1k vc_7 304 304 4700 4921 C 1 0.00 855 reject_low 12 ALIGNMENT 256 YS2-10b22.p1k vc_3 446 1 1297 1749 C 446 87.00 475 reject_low 4 ALIGNMENT 256 YS2-10b22.p1k vc_5 446 1 4217 4669 C 446 87.00 475 reject_vc 0 ALIGNMENT 911 YS2-10b23.p1k chr16 1114 32 924243 925325 C 1083 95.66 1152 accept 0 ALIGNMENT 955 YS2-10b23.q1k chr16 39 1147 920663 921777 F 1109 95.76 1156 accept 0 ALIGNMENT 933 YS2-10b24.q1k chr11 1151 20 385615 386769 C 1132 95.41 1153 accept 0 ALIGNMENT 1004 YS2-10b24.p1k chr11 41 1213 385231 386403 F 1173 95.99 1216 accept 0 ALIGNMENT 926 YS2-10c02.q1k chr02 40 1136 462443 463558 F 1097 96.72 1259 accept 0 ALIGNMENT 1056 YS2-10c02.p1k chr02 1254 33 466705 467941 C 1222 96.32 1291 accept 0 ALIGNMENT 936 YS2-10c03.p1k chr07 34 1140 715689 716810 F 1107 95.84 1295 accept 0 ALIGNMENT 905 YS2-10c03.q1k chr07 1171 29 720171 721319 C 1143 95.10 1297 accept 0 ALIGNMENT 960 YS2-10c04.q1k chr16 1149 38 373653 374776 C 1112 96.49 1300 accept 0 ALIGNMENT 1008 YS2-10c04.p1k chr16 31 1164 367955 369103 F 1134 96.91 1289 accept 0 ALIGNMENT 935 YS2-10c05.p1k chr12 1079 33 561816 562877 C 1047 97.33 1294 accept 0 ALIGNMENT 978 YS2-10c05.q1k chr12 41 1111 556885 557958 F 1071 97.48 1383 accept 0 ALIGNMENT 938 YS2-10c06.q1k chr12 27 1035 27258 28274 F 1009 97.82 1311 accept 0 ALIGNMENT 1028 YS2-10c06.p1k chr12 1191 33 30473 31646 C 1159 97.07 1338 accept 0 ALIGNMENT 0 YS2-10c07.q1k vc_2 467 62 2146 2145 C 406 0.00 508 reject_low 3 ALIGNMENT 0 YS2-10c07.q1k vc_5 469 62 5064 5063 C 408 0.00 508 reject_low 6 ALIGNMENT 0 YS2-10c07.q1k vc_3 467 62 2513 2512 C 406 0.00 508 reject_low 4 ALIGNMENT 39 YS2-10c07.q1k vc_5 508 470 5025 5063 C 39 100.00 508 reject_low 6 ALIGNMENT 0 YS2-10c07.q1k vc_4 62 467 5831 5830 F 406 0.00 508 reject_low 5 ALIGNMENT 408 YS2-10c07.p1k chr15 459 30 905999 906429 C 430 99.77 477 accept_chi 1 ALIGNMENT 36 YS2-10c07.q1k vc_5 505 470 1 36 C 36 100.00 508 reject_low 8 ALIGNMENT 38 YS2-10c07.q1k vc_7 471 508 13525 13562 F 38 100.00 508 reject_low 7 ALIGNMENT 41 YS2-10c07.q1k vc_1 508 468 2472 2512 C 41 100.00 508 reject_low 2 ALIGNMENT 41 YS2-10c07.q1k vc_4 468 508 5831 5871 F 41 100.00 508 reject_low 5 ALIGNMENT 41 YS2-10c07.q1k vc_3 508 468 2472 2512 C 41 100.00 508 reject_low 4 ALIGNMENT 0 YS2-10c07.q1k vc_5 469 62 37 36 C 408 0.00 508 reject_low 8 ALIGNMENT 413 YS2-10c07.q1k chr15 38 468 905999 906429 F 431 100.00 508 accept_chi 0 ALIGNMENT 0 YS2-10c07.q1k vc_1 467 62 2513 2512 C 406 0.00 508 reject_low 2 ALIGNMENT 0 YS2-10c07.q1k vc_7 62 470 13525 13524 F 409 0.00 508 reject_low 7 ALIGNMENT 0 YS2-10c07.q1k chr15 469 508 906429 906428 F 40 0.00 508 accept_chi 0 ALIGNMENT 41 YS2-10c07.q1k vc_2 508 468 2105 2145 C 41 100.00 508 reject_low 3 ALIGNMENT 0 YS2-10c07.p1k chr15 477 460 906000 905999 C 18 0.00 477 accept_chi 1 ALIGNMENT 1012 YS2-10c08.q1k chr13 1150 40 682690 683807 C 1111 97.21 1344 accept 0 ALIGNMENT 968 YS2-10c08.p1k chr13 30 1129 678795 679910 F 1100 96.73 1256 accept 0 ALIGNMENT 0 YS2-10c09.q1k vc_7 62 271 13525 13524 F 210 0.00 309 reject_low 7 ALIGNMENT 38 YS2-10c09.q1k vc_7 272 309 13525 13562 F 38 100.00 309 reject_low 7 ALIGNMENT 42 YS2-10c09.q1k vc_3 309 268 2472 2513 C 42 100.00 309 reject_low 4 ALIGNMENT 42 YS2-10c09.q1k vc_4 268 309 5830 5871 F 42 100.00 309 reject_low 5 ALIGNMENT 39 YS2-10c09.q1k vc_5 309 271 5025 5063 C 39 100.00 309 reject_low 6 ALIGNMENT 0 YS2-10c09.q1k vc_5 270 62 37 36 C 209 0.00 309 reject_low 8 ALIGNMENT 206 YS2-10c09.p1k chr15 31 260 646828 647057 F 230 100.00 279 accept_chi 0 ALIGNMENT 206 YS2-10c09.q1k chr15 268 39 646828 647057 C 230 100.00 309 accept_chi 1 ALIGNMENT 0 YS2-10c09.q1k chr15 309 269 646829 646828 C 41 0.00 309 accept_chi 1 ALIGNMENT 0 YS2-10c09.q1k vc_5 270 62 5064 5063 C 209 0.00 309 reject_low 6 ALIGNMENT 0 YS2-10c09.q1k vc_2 267 62 2147 2146 C 206 0.00 309 reject_low 3 ALIGNMENT 42 YS2-10c09.q1k vc_1 309 268 2472 2513 C 42 100.00 309 reject_low 2 ALIGNMENT 0 YS2-10c09.q1k vc_1 267 62 2514 2513 C 206 0.00 309 reject_low 2 ALIGNMENT 0 YS2-10c09.p1k chr15 261 279 647057 647056 F 19 0.00 279 accept_chi 0 ALIGNMENT 36 YS2-10c09.q1k vc_5 306 271 1 36 C 36 100.00 309 reject_low 8 ALIGNMENT 0 YS2-10c09.q1k vc_3 267 62 2514 2513 C 206 0.00 309 reject_low 4 ALIGNMENT 42 YS2-10c09.q1k vc_2 309 268 2105 2146 C 42 100.00 309 reject_low 3 ALIGNMENT 0 YS2-10c09.q1k vc_4 62 267 5830 5829 F 206 0.00 309 reject_low 5 ALIGNMENT 1038 YS2-10c10.q1k chr15 1267 41 456237 457477 C 1227 95.76 1365 accept 0 ALIGNMENT 1018 YS2-10c10.p1k chr15 27 1178 454995 456158 F 1152 97.22 1314 accept 0 ALIGNMENT 536 YS2-10c12.q1k chr13 39 1110 551318 552376 F 1072 84.61 1356 accept 0 ALIGNMENT 966 YS2-10c13.q1k chr12 1172 30 851130 852288 C 1143 95.10 1312 accept 0 ALIGNMENT 985 YS2-10c13.p1k chr12 37 1167 849807 850954 F 1131 96.64 1335 accept 0 ALIGNMENT 848 YS2-10c14.p1k chr15 30 982 1011409 1012376 F 953 97.69 1279 accept 0 ALIGNMENT 23 YS2-10c14.p1k chr08 106 72 420572 420606 C 35 97.14 1279 reject_low 1 ALIGNMENT 0 YS2-10c14.p1k chr08 874 107 420573 420572 C 768 0.00 1279 reject_low 1 ALIGNMENT 878 YS2-10c14.q1k chr15 1118 39 1015230 1016323 C 1080 95.19 1309 accept 0 ALIGNMENT 0 YS2-10c15.q1k chr03 62 154 151273 151272 F 93 0.00 365 reject_low 23 ALIGNMENT 80 YS2-10c15.q1k chr11 236 154 202644 202726 C 83 98.80 365 reject_low 21 ALIGNMENT 82 YS2-10c15.q1k chr16 245 155 582049 582139 C 91 96.70 365 reject_low 20 ALIGNMENT 41 YS2-10c15.q1k vc_4 325 365 5831 5871 F 41 100.00 365 reject_low 11 ALIGNMENT 0 YS2-10c15.q1k chr03 241 365 151358 151357 F 125 0.00 365 reject_low 23 ALIGNMENT 36 YS2-10c15.q1k vc_5 362 327 1 36 C 36 100.00 365 reject_low 14 ALIGNMENT 0 YS2-10c15.q1k chr06 62 154 226667 226666 F 93 0.00 365 reject_low 26 ALIGNMENT 0 YS2-10c15.q1k chr04 325 365 1352617 1352616 F 41 0.00 365 reject_low 8 ALIGNMENT 0 YS2-10c15.q1k chr10 365 251 414867 414866 C 115 0.00 365 reject_low 19 ALIGNMENT 0 YS2-10c15.q1k chr04 161 62 1201814 1201813 C 100 0.00 365 reject_low 24 ALIGNMENT 432 YS2-10c15.p1k vc_2 605 1 1141 1749 C 605 91.24 683 reject_vc 4 ALIGNMENT 0 YS2-10c15.q1k chr06 236 365 226747 226746 F 130 0.00 365 reject_low 26 ALIGNMENT 434 YS2-10c15.p1k vc_6 1 605 3712 4320 F 605 90.91 683 reject_vc 2 ALIGNMENT 0 YS2-10c15.q1k vc_5 326 62 5064 5063 C 265 0.00 365 reject_low 12 ALIGNMENT 77 YS2-10c15.q1k chr13 155 237 480613 480694 F 83 98.80 365 reject_low 25 ALIGNMENT 79 YS2-10c15.q1k chr04 240 162 1201735 1201813 C 79 100.00 365 reject_low 24 ALIGNMENT 0 YS2-10c15.q1k vc_3 324 62 2513 2512 C 263 0.00 365 reject_low 10 ALIGNMENT 80 YS2-10c15.q1k chr05 147 236 435732 435821 F 90 96.67 365 reject_low 15 ALIGNMENT 0 YS2-10c15.q1k chr05 62 146 435732 435731 F 85 0.00 365 reject_low 15 ALIGNMENT 83 YS2-10c15.q1k chr10 250 162 414866 414954 C 89 97.75 365 reject_low 19 ALIGNMENT 0 YS2-10c15.q1k chr11 365 237 202645 202644 C 129 0.00 365 reject_low 21 ALIGNMENT 0 YS2-10c15.q1k vc_1 324 62 2513 2512 C 263 0.00 365 reject_low 9 ALIGNMENT 425 YS2-10c15.p1k vc_7 1 605 13918 14526 F 605 90.41 683 reject_vc 7 ALIGNMENT 0 YS2-10c15.q1k chr05 252 365 135513 135512 F 114 0.00 365 reject_low 18 ALIGNMENT 0 YS2-10c15.q1k chr04 62 154 1352448 1352447 F 93 0.00 365 reject_low 8 ALIGNMENT 41 YS2-10c15.q1k vc_3 365 325 2472 2512 C 41 100.00 365 reject_low 10 ALIGNMENT 432 YS2-10c15.p1k vc_1 605 1 1141 1749 C 605 91.24 683 reject_vc 3 ALIGNMENT 82 YS2-10c15.q1k chr07 239 155 876395 876479 C 85 98.82 365 reject_low 22 ALIGNMENT 432 YS2-10c15.p1k vc_3 605 1 1141 1749 C 605 91.24 683 reject_vc 5 ALIGNMENT 0 YS2-10c15.q1k chr13 62 154 480613 480612 F 93 0.00 365 reject_low 25 ALIGNMENT 93 YS2-10c15.q1k chr07 155 250 185712 185807 F 96 98.96 365 reject_low 16 ALIGNMENT 425 YS2-10c15.p1k vc_7 1 605 456 1064 F 605 90.41 683 reject_vc 6 ALIGNMENT 0 YS2-10c15.q1k chr11 153 62 202727 202726 C 92 0.00 365 reject_low 21 ALIGNMENT 0 YS2-10c15.q1k vc_7 62 327 13525 13524 F 266 0.00 365 reject_low 13 ALIGNMENT 0 YS2-10c15.q1k chr05 237 365 435821 435820 F 129 0.00 365 reject_low 15 ALIGNMENT 89 YS2-10c15.q1k chr07 250 155 122258 122354 C 96 97.92 365 reject_low 17 ALIGNMENT 80 YS2-10c15.q1k chr03 155 240 151273 151358 F 86 97.67 365 reject_low 23 ALIGNMENT 0 YS2-10c15.q1k chr07 365 251 122259 122258 C 115 0.00 365 reject_low 17 ALIGNMENT 39 YS2-10c15.q1k vc_5 365 327 5025 5063 C 39 100.00 365 reject_low 12 ALIGNMENT 137 YS2-10c15.q1k chr04 155 324 1352448 1352617 F 170 94.12 365 reject_low 8 ALIGNMENT 0 YS2-10c15.q1k chr16 154 62 582140 582139 C 93 0.00 365 reject_low 20 ALIGNMENT 0 YS2-10c15.q1k chr07 154 62 122355 122354 C 93 0.00 365 reject_low 17 ALIGNMENT 0 YS2-10c15.q1k chr10 161 62 414955 414954 C 100 0.00 365 reject_low 19 ALIGNMENT 82 YS2-10c15.q1k chr05 155 251 135417 135513 F 97 94.85 365 reject_low 18 ALIGNMENT 435 YS2-10c15.p1k vc_5 605 1 4061 4669 C 605 91.40 683 reject_vc 1 ALIGNMENT 0 YS2-10c15.q1k chr04 365 241 1201736 1201735 C 125 0.00 365 reject_low 24 ALIGNMENT 38 YS2-10c15.q1k vc_7 328 365 13525 13562 F 38 100.00 365 reject_low 13 ALIGNMENT 0 YS2-10c15.q1k chr07 251 365 185807 185806 F 115 0.00 365 reject_low 16 ALIGNMENT 0 YS2-10c15.q1k vc_4 62 324 5831 5830 F 263 0.00 365 reject_low 11 ALIGNMENT 0 YS2-10c15.q1k chr13 238 365 480694 480693 F 128 0.00 365 reject_low 25 ALIGNMENT 269 YS2-10c15.q1k chr09 30 324 300094 300387 F 295 98.31 365 accept 0 ALIGNMENT 0 YS2-10c15.q1k chr16 365 246 582050 582049 C 120 0.00 365 reject_low 20 ALIGNMENT 0 YS2-10c15.q1k vc_5 326 62 37 36 C 265 0.00 365 reject_low 14 ALIGNMENT 0 YS2-10c15.q1k chr07 62 154 185712 185711 F 93 0.00 365 reject_low 16 ALIGNMENT 68 YS2-10c15.q1k chr06 155 235 226667 226747 F 81 96.30 365 reject_low 26 ALIGNMENT 0 YS2-10c15.q1k chr09 325 365 300387 300386 F 41 0.00 365 accept 0 ALIGNMENT 0 YS2-10c15.q1k chr07 154 62 876480 876479 C 93 0.00 365 reject_low 22 ALIGNMENT 0 YS2-10c15.q1k chr05 62 154 135417 135416 F 93 0.00 365 reject_low 18 ALIGNMENT 41 YS2-10c15.q1k vc_1 365 325 2472 2512 C 41 100.00 365 reject_low 9 ALIGNMENT 0 YS2-10c15.q1k chr07 365 240 876396 876395 C 126 0.00 365 reject_low 22 ALIGNMENT 1006 YS2-10c16.q1k chr11 37 1190 371067 372226 F 1154 96.79 1385 accept 0 ALIGNMENT 1072 YS2-10c16.p1k chr11 1275 38 374709 375954 C 1238 96.61 1374 accept 0 ALIGNMENT 0 YS2-10c21.q1k chr01 384 293 107828 107919 C 92 0.00 1198 reject_low 1 ALIGNMENT 923 YS2-10c21.q1k chr15 30 1198 916374 917559 F 1169 93.93 1198 accept 0 ALIGNMENT 24 YS2-10c21.q1k chr01 433 385 107779 107827 C 49 83.67 1198 reject_low 1 ALIGNMENT 878 YS2-10c21.p1k chr15 1100 32 918284 919360 C 1069 95.14 1237 accept 0 ALIGNMENT 0 YS2-10c21.q1k chr01 629 434 107780 107779 C 196 0.00 1198 reject_low 1 ALIGNMENT 48 YS2-10c21.q1k chr01 292 30 107920 108182 C 263 73.76 1198 reject_low 1 ALIGNMENT 1019 YS2-10c22.p1k chr05 1226 32 344409 345615 C 1195 96.49 1256 accept 0 ALIGNMENT 992 YS2-10c22.q1k chr05 44 1189 343105 344261 F 1146 96.25 1255 accept 0 ALIGNMENT 158 YS2-10c23.q1k chr10 205 41 5598 5762 C 165 98.79 248 reject_low 22 ALIGNMENT 0 YS2-10c23.p1k chr08 214 196 558191 558190 C 19 0.00 214 reject_low 25 ALIGNMENT 0 YS2-10c23.p1k chr15 214 196 1085838 1085837 C 19 0.00 214 reject_low 19 ALIGNMENT 156 YS2-10c23.p1k chr08 195 29 558190 558357 C 167 98.20 214 reject_low 25 ALIGNMENT 0 YS2-10c23.q1k chr08 248 209 4006 4005 C 40 0.00 248 reject_low 3 ALIGNMENT 0 YS2-10c23.q1k chr12 206 248 1066485 1066484 F 43 0.00 248 ambiguous_tel 1 ALIGNMENT 0 YS2-10c23.p1k chr05 214 196 571502 571501 C 19 0.00 214 reject_low 35 ALIGNMENT 0 YS2-10c23.p1k chr07 214 196 1085579 1085578 C 19 0.00 214 reject_low 24 ALIGNMENT 161 YS2-10c23.q1k chr16 208 41 5132 5299 C 168 98.81 248 reject_low 12 ALIGNMENT 0 YS2-10c23.p1k chr04 214 196 1526673 1526672 C 19 0.00 214 reject_low 15 ALIGNMENT 0 YS2-10c23.q1k chr12 248 209 4274 4273 C 40 0.00 248 reject_low 4 ALIGNMENT 0 YS2-10c23.p1k chr14 196 214 5390 5389 F 19 0.00 214 reject_low 26 ALIGNMENT 0 YS2-10c23.q1k chr15 209 248 1086004 1086003 F 40 0.00 248 reject_low 7 ALIGNMENT 0 YS2-10c23.p1k chr10 196 214 5762 5761 F 19 0.00 214 reject_low 33 ALIGNMENT 159 YS2-10c23.p1k chr13 29 195 4149 4316 F 167 98.80 214 reject_low 18 ALIGNMENT 164 YS2-10c23.q1k chr12 208 41 9808 9975 C 168 99.40 248 ambiguous_tel 0 ALIGNMENT 0 YS2-10c23.q1k vc_7 62 210 63 62 F 149 0.00 248 reject_low 37 ALIGNMENT 0 YS2-10c23.q1k chr12 248 209 9809 9808 C 40 0.00 248 ambiguous_tel 0 ALIGNMENT 161 YS2-10c23.q1k chr07 41 208 1085578 1085745 F 168 98.81 248 reject_low 9 ALIGNMENT 156 YS2-10c23.p1k chr14 29 195 5223 5390 F 167 98.20 214 reject_low 26 ALIGNMENT 153 YS2-10c23.p1k chr05 32 195 5198 5362 F 164 98.17 214 reject_low 31 ALIGNMENT 0 YS2-10c23.q1k chr14 248 209 5224 5223 C 40 0.00 248 reject_low 11 ALIGNMENT 159 YS2-10c23.p1k chr15 195 29 1085837 1086004 C 167 98.80 214 reject_low 19 ALIGNMENT 160 YS2-10c23.q1k chr16 41 208 943736 943904 F 168 98.81 248 reject_low 14 ALIGNMENT 0 YS2-10c23.p1k chr05 196 214 5362 5361 F 19 0.00 214 reject_low 31 ALIGNMENT 0 YS2-10c23.q1k chr04 209 248 1526839 1526838 F 40 0.00 248 reject_low 2 ALIGNMENT 0 YS2-10c23.q1k chr08 209 248 558357 558356 F 40 0.00 248 reject_low 10 ALIGNMENT 0 YS2-10c23.p1k chr16 196 214 5299 5298 F 19 0.00 214 reject_low 27 ALIGNMENT 158 YS2-10c23.q1k chr09 205 41 5615 5779 C 165 98.79 248 reject_low 21 ALIGNMENT 0 YS2-10c23.p1k chr09 196 214 5779 5778 F 19 0.00 214 reject_low 32 ALIGNMENT 161 YS2-10c23.q1k chr08 41 208 558190 558357 F 168 98.81 248 reject_low 10 ALIGNMENT 155 YS2-10c23.q1k chr05 41 205 571501 571665 F 165 98.18 248 reject_low 30 ALIGNMENT 0 YS2-10c23.p1k chr12 196 214 9975 9974 F 19 0.00 214 reject_low 17 ALIGNMENT 150 YS2-10c23.p1k chr05 195 32 571501 571665 C 164 97.56 214 reject_low 35 ALIGNMENT 0 YS2-10c23.q1k chr07 209 248 1085745 1085744 F 40 0.00 248 reject_low 9 ALIGNMENT 38 YS2-10c23.q1k vc_7 211 248 63 100 F 38 100.00 248 reject_low 37 ALIGNMENT 159 YS2-10c23.p1k chr08 29 195 4005 4172 F 167 98.80 214 reject_low 16 ALIGNMENT 0 YS2-10c23.p1k chr06 196 214 3478 3477 F 19 0.00 214 reject_low 28 ALIGNMENT 158 YS2-10c23.q1k chr05 205 41 5198 5362 C 165 98.79 248 reject_low 20 ALIGNMENT 164 YS2-10c23.q1k chr13 208 41 4149 4316 C 168 99.40 248 reject_low 6 ALIGNMENT 164 YS2-10c23.q1k chr15 41 208 1085837 1086004 F 168 99.40 248 reject_low 7 ALIGNMENT 164 YS2-10c23.q1k chr08 208 41 4005 4172 C 168 99.40 248 reject_low 3 ALIGNMENT 0 YS2-10c23.q1k chr02 248 209 4475 4474 C 40 0.00 248 reject_low 8 ALIGNMENT 159 YS2-10c23.p1k chr12 29 195 4273 4440 F 167 98.80 214 ambiguous_tel 0 ALIGNMENT 161 YS2-10c23.q1k chr14 208 41 5223 5390 C 168 98.81 248 reject_low 11 ALIGNMENT 0 YS2-10c23.q1k chr06 248 209 3311 3310 C 40 0.00 248 reject_low 13 ALIGNMENT 156 YS2-10c23.p1k chr16 29 195 5132 5299 F 167 98.20 214 reject_low 27 ALIGNMENT 161 YS2-10c23.q1k chr02 208 41 4474 4641 C 168 98.81 248 reject_low 8 ALIGNMENT 153 YS2-10c23.p1k chr12 195 32 1066321 1066485 C 164 98.17 214 reject_low 34 ALIGNMENT 0 YS2-10c23.q1k vc_1 207 62 2513 2512 C 146 0.00 248 reject_low 36 ALIGNMENT 38 YS2-10c23.q1k vc_7 211 248 13525 13562 F 38 100.00 248 reject_low 38 ALIGNMENT 155 YS2-10c23.p1k chr06 29 195 3310 3478 F 167 98.20 214 reject_low 28 ALIGNMENT 0 YS2-10c23.q1k chr05 248 206 5199 5198 C 43 0.00 248 reject_low 20 ALIGNMENT 164 YS2-10c23.q1k chr04 41 208 1526672 1526839 F 168 99.40 248 reject_low 2 ALIGNMENT 0 YS2-10c23.q1k chr05 206 248 571665 571664 F 43 0.00 248 reject_low 30 ALIGNMENT 0 YS2-10c23.q1k chr16 248 209 5133 5132 C 40 0.00 248 reject_low 12 ALIGNMENT 0 YS2-10c23.p1k chr13 196 214 4316 4315 F 19 0.00 214 reject_low 18 ALIGNMENT 0 YS2-10c23.q1k vc_7 62 210 13525 13524 F 149 0.00 248 reject_low 38 ALIGNMENT 164 YS2-10c23.q1k chr12 208 41 4273 4440 C 168 99.40 248 reject_low 4 ALIGNMENT 156 YS2-10c23.p1k chr07 195 29 1085578 1085745 C 167 98.20 214 reject_low 24 ALIGNMENT 0 YS2-10c23.p1k chr02 196 214 4641 4640 F 19 0.00 214 reject_low 23 ALIGNMENT 158 YS2-10c23.q1k chr12 41 205 1066321 1066485 F 165 98.79 248 ambiguous_tel 1 ALIGNMENT 155 YS2-10c23.p1k chr16 195 29 943736 943904 C 167 98.20 214 reject_low 29 ALIGNMENT 0 YS2-10c23.p1k chr12 196 214 4440 4439 F 19 0.00 214 ambiguous_tel 0 ALIGNMENT 153 YS2-10c23.p1k chr10 32 195 5598 5762 F 164 98.17 214 reject_low 33 ALIGNMENT 0 YS2-10c23.q1k chr16 209 248 943904 943903 F 40 0.00 248 reject_low 14 ALIGNMENT 0 YS2-10c23.p1k chr08 196 214 4172 4171 F 19 0.00 214 reject_low 16 ALIGNMENT 41 YS2-10c23.q1k vc_1 248 208 2472 2512 C 41 100.00 248 reject_low 36 ALIGNMENT 0 YS2-10c23.q1k chr10 248 206 5599 5598 C 43 0.00 248 reject_low 22 ALIGNMENT 159 YS2-10c23.p1k chr04 195 29 1526672 1526839 C 167 98.80 214 reject_low 15 ALIGNMENT 0 YS2-10c23.q1k chr12 209 248 1073040 1073039 F 40 0.00 248 reject_low 5 ALIGNMENT 153 YS2-10c23.p1k chr09 32 195 5615 5779 F 164 98.17 214 reject_low 32 ALIGNMENT 0 YS2-10c23.q1k chr09 248 206 5616 5615 C 43 0.00 248 reject_low 21 ALIGNMENT 160 YS2-10c23.q1k chr06 208 41 3310 3478 C 168 98.81 248 reject_low 13 ALIGNMENT 0 YS2-10c23.q1k chr13 248 209 4150 4149 C 40 0.00 248 reject_low 6 ALIGNMENT 0 YS2-10c23.p1k chr12 214 196 1072874 1072873 C 19 0.00 214 ambiguous_tel 1 ALIGNMENT 156 YS2-10c23.p1k chr02 29 195 4474 4641 F 167 98.20 214 reject_low 23 ALIGNMENT 0 YS2-10c23.p1k chr12 214 196 1066322 1066321 C 19 0.00 214 reject_low 34 ALIGNMENT 159 YS2-10c23.p1k chr12 29 195 9808 9975 F 167 98.80 214 reject_low 17 ALIGNMENT 0 YS2-10c23.p1k chr16 214 196 943737 943736 C 19 0.00 214 reject_low 29 ALIGNMENT 159 YS2-10c23.p1k chr12 195 29 1072873 1073040 C 167 98.80 214 ambiguous_tel 1 ALIGNMENT 164 YS2-10c23.q1k chr12 41 208 1072873 1073040 F 168 99.40 248 reject_low 5 ALIGNMENT 880 YS2-10d01.q1k chr02 41 1062 462443 463475 F 1022 97.36 1229 accept 0 ALIGNMENT 1050 YS2-10d01.p1k chr02 1288 34 466671 467942 C 1255 95.46 1304 accept 0 ALIGNMENT 912 YS2-10d03.q1k chr07 1081 40 33167 34217 C 1042 97.22 1276 accept 0 ALIGNMENT 1035 YS2-10d03.p1k chr07 30 1191 28653 29822 F 1162 97.42 1315 accept 0 ALIGNMENT 216 YS2-10d05.p1k chr04 37 265 1411012 1411240 F 229 98.25 272 accept 0 ALIGNMENT 111 YS2-10d07.q1k chr15 40 186 344753 344899 F 147 92.52 1340 reject_low 4 ALIGNMENT 134 YS2-10d07.q1k chr15 40 203 344789 344952 F 164 94.51 1340 reject_low 1 ALIGNMENT 0 YS2-10d07.q1k chr15 187 785 344791 344790 F 599 0.00 1340 reject_low 10 ALIGNMENT 0 YS2-10d07.q1k chr15 187 785 344899 344898 F 599 0.00 1340 reject_low 4 ALIGNMENT 34 YS2-10d07.q1k chr15 40 77 345077 345114 F 38 97.37 1340 reject_low 8 ALIGNMENT 75 YS2-10d07.q1k chr15 40 167 345005 345132 F 128 86.72 1340 reject_low 7 ALIGNMENT 0 YS2-10d07.q1k chr15 187 785 344827 344826 F 599 0.00 1340 reject_low 9 ALIGNMENT 0 YS2-10d07.q1k chr15 122 136 344739 344741 F 15 0.00 1340 reject_low 10 ALIGNMENT 0 YS2-10d07.q1k chr15 187 785 345007 345006 F 599 0.00 1340 reject_low 3 ALIGNMENT 59 YS2-10d07.q1k chr15 101 186 344742 344827 F 86 90.70 1340|11,0 reject_low 9 ALIGNMENT 39 YS2-10d07.q1k chr15 137 186 344742 344791 F 50 94.00 1340 reject_low 10 ALIGNMENT 0 YS2-10d07.q1k chr15 187 785 344971 344970 F 599 0.00 1340 reject_low 6 ALIGNMENT 0 YS2-10d07.q1k chr15 204 785 345060 345059 F 582 0.00 1340 reject_low 2 ALIGNMENT 96 YS2-10d07.q1k chr15 40 186 344825 344971 F 147 89.12 1340 reject_low 6 ALIGNMENT 0 YS2-10d07.q1k chr15 78 785 345114 345113 F 708 0.00 1340 reject_low 8 ALIGNMENT 25 YS2-10d07.q1k chr15 81 121 344698 344738 F 41 87.80 1340|0,10 reject_low 9,10 ALIGNMENT 115 YS2-10d07.q1k chr15 45 186 344866 345007 F 142 94.37 1340 reject_low 3 ALIGNMENT 107 YS2-10d07.q1k chr15 40 203 344897 345060 F 164 89.02 1340 reject_low 2 ALIGNMENT 0 YS2-10d07.q1k chr15 62 80 344698 344697 F 19 0.00 1340 reject_low 9,10 ALIGNMENT 94 YS2-10d07.q1k chr15 65 203 344742 344880 F 139 89.93 1340 reject_low 5 ALIGNMENT 789 YS2-10d07.q1k chr15 40 873 344969 345802 F 834 98.92 1340 accept 0 ALIGNMENT 0 YS2-10d07.q1k chr15 204 785 344880 344879 F 582 0.00 1340 reject_low 5 ALIGNMENT 0 YS2-10d07.q1k chr15 168 785 345132 345131 F 618 0.00 1340 reject_low 7 ALIGNMENT 0 YS2-10d07.q1k chr15 204 785 344952 344951 F 582 0.00 1340 reject_low 1 ALIGNMENT 0 YS2-10d07.q1k chr15 112 111 344729 344752 F 0 0.00 1340 reject_low 9 ALIGNMENT 1046 YS2-10d07.p1k chr15 1310 31 350031 351310 C 1280 95.47 1311 accept 0 ALIGNMENT 0 YS2-10d08.q1k chr10 897 726 338174 338173 C 172 0.00 1329 reject_low 2 ALIGNMENT 984 YS2-10d08.p1k chr10 1222 32 457528 458730 C 1191 95.72 1305 accept 0 ALIGNMENT 0 YS2-10d08.q1k chr07 732 897 883834 883833 F 166 0.00 1329 reject_low 1 ALIGNMENT 1045 YS2-10d08.q1k chr10 39 1250 453923 455131 F 1212 95.71 1329 accept 0 ALIGNMENT 481 YS2-10d08.q1k chr10 725 39 338173 338859 C 687 90.10 1329 reject_low 2 ALIGNMENT 572 YS2-10d08.q1k chr07 39 731 883143 883834 F 693 94.37 1329 reject_low 1 ALIGNMENT 954 YS2-10d09.p1k chr09 1157 28 334203 335326 C 1130 95.93 1339 accept 0 ALIGNMENT 589 YS2-10d11.q1k chr09 28 738 304800 305503 F 711 96.06 1290 accept 0 ALIGNMENT 1026 YS2-10d11.p1k chr09 1218 31 308218 309414 C 1188 96.38 1383 accept 0 ALIGNMENT 896 YS2-10d12.p1k chr13 1023 29 32573 33583 C 995 97.99 1252 accept 0 ALIGNMENT 1013 YS2-10d12.q1k chr13 39 1217 32061 33261 F 1179 96.95 1335 accept 0 ALIGNMENT 1032 YS2-10d13.p1k chr04 31 1302 873785 875064 F 1272 93.71 1364 ambiguous_trans 7 ALIGNMENT 818 YS2-10d13.q1k chr16 1209 43 848775 849941 C 1167 91.86 1348 reject_low 15 ALIGNMENT 1032 YS2-10d13.p1k chr15 1302 31 706775 708054 C 1272 93.71 1364 ambiguous_trans 8 ALIGNMENT 1055 YS2-10d13.p1k chr07 31 1302 813421 814700 F 1272 94.42 1364 ambiguous_trans 3 ALIGNMENT 300 YS2-10d13.p1k chr01 1003 115 163203 164093 C 889 78.52 1364 reject_low 13 ALIGNMENT 915 YS2-10d13.q1k chr07 43 1246 569134 570337 F 1204 93.77 1348 ambiguous_trans 5 ALIGNMENT 906 YS2-10d13.q1k chr12 1246 43 945555 946758 C 1204 93.52 1348 ambiguous_trans 0 ALIGNMENT 1048 YS2-10d13.p1k chr04 31 1302 983134 984413 F 1272 94.26 1364 ambiguous_trans 11 ALIGNMENT 1055 YS2-10d13.p1k chr06 31 1302 139877 141156 F 1272 94.42 1364 ambiguous_trans 2 ALIGNMENT 788 YS2-10d13.q1k chr10 1209 43 476741 477907 C 1167 91.00 1348 reject_low 17 ALIGNMENT 827 YS2-10d13.q1k chr04 43 1209 645888 647054 F 1167 92.12 1348 reject_low 21 ALIGNMENT 1064 YS2-10d13.p1k chr12 31 1302 943158 944437 F 1272 94.65 1364 ambiguous_trans 0 ALIGNMENT 846 YS2-10d13.q1k chr04 1246 43 985531 986734 C 1204 91.86 1348 ambiguous_trans 11 ALIGNMENT 0 YS2-10d13.p1k chr04 114 62 990570 990569 C 53 0.00 1364 reject_low 26 ALIGNMENT 304 YS2-10d13.p1k chr16 1003 115 807602 808491 C 889 78.63 1364 reject_low 18 ALIGNMENT 0 YS2-10d13.p1k chr07 114 62 565698 565697 C 53 0.00 1364 reject_low 27 ALIGNMENT 818 YS2-10d13.q1k chr13 1209 43 188528 189694 C 1167 91.86 1348 reject_low 14 ALIGNMENT 915 YS2-10d13.q1k chr07 1246 43 815818 817021 C 1204 93.77 1348 ambiguous_trans 3 ALIGNMENT 897 YS2-10d13.q1k chr02 1246 43 34007 35210 C 1204 93.27 1348 ambiguous_trans 9 ALIGNMENT 1029 YS2-10d13.p1k chr15 31 1302 972251 973530 F 1272 93.63 1364 ambiguous_trans 10 ALIGNMENT 0 YS2-10d13.p1k chr10 62 114 474448 474447 F 53 0.00 1364 reject_low 17 ALIGNMENT 299 YS2-10d13.p1k chr16 115 1003 846479 847371 F 889 78.85 1364 reject_low 15 ALIGNMENT 213 YS2-10d13.p1k chr16 1003 415 853590 854179 C 589 79.12 1364 reject_low 19 ALIGNMENT 0 YS2-10d13.p1k chr02 62 114 223107 223106 F 53 0.00 1364 reject_low 25 ALIGNMENT 304 YS2-10d13.p1k chr10 115 1003 474448 475337 F 889 78.63 1364 reject_low 17 ALIGNMENT 0 YS2-10d13.p1k chr13 62 114 198402 198401 F 53 0.00 1364 reject_low 16 ALIGNMENT 909 YS2-10d13.q1k chr14 43 1246 562423 563626 F 1204 93.60 1348 ambiguous_trans 6 ALIGNMENT 767 YS2-10d13.q1k chr16 43 1209 805032 806198 F 1167 90.40 1348 reject_low 18 ALIGNMENT 307 YS2-10d13.p1k chr02 115 1003 223107 223996 F 889 78.74 1364 reject_low 25 ALIGNMENT 1038 YS2-10d13.p1k chr07 1302 31 571455 572735 C 1272 94.10 1364 ambiguous_trans 5 ALIGNMENT 301 YS2-10d13.p1k chr12 1003 115 218046 218935 C 889 78.52 1364 reject_low 28 ALIGNMENT 0 YS2-10d13.p1k chr12 114 62 218936 218935 C 53 0.00 1364 reject_low 28 ALIGNMENT 915 YS2-10d13.q1k chr15 43 1246 704454 705657 F 1204 93.77 1348 ambiguous_trans 8 ALIGNMENT 1055 YS2-10d13.p1k chr03 31 1302 86779 88058 F 1272 94.42 1364 ambiguous_trans 1 ALIGNMENT 304 YS2-10d13.p1k chr13 115 1003 198402 199291 F 889 78.63 1364 reject_low 16 ALIGNMENT 1003 YS2-10d13.p1k chr12 1186 31 978573 979727 C 1156 95.24 1364 reject_low 12 ALIGNMENT 915 YS2-10d13.q1k chr03 1246 43 89176 90379 C 1204 93.77 1348 ambiguous_trans 1 ALIGNMENT 307 YS2-10d13.p1k chr13 115 1003 186235 187124 F 889 78.74 1364 reject_low 14 ALIGNMENT 906 YS2-10d13.q1k chr15 1246 43 974648 975851 C 1204 93.52 1348 ambiguous_trans 10 ALIGNMENT 821 YS2-10d13.q1k chr14 1209 43 523506 524672 C 1167 91.95 1348 reject_low 22 ALIGNMENT 0 YS2-10d13.p1k chr16 114 62 808492 808491 C 53 0.00 1364 reject_low 18 ALIGNMENT 301 YS2-10d13.p1k chr04 1003 115 989680 990569 C 889 78.52 1364 reject_low 26 ALIGNMENT 1046 YS2-10d13.p1k chr02 31 1302 31610 32889 F 1272 94.18 1364 ambiguous_trans 9 ALIGNMENT 0 YS2-10d13.p1k chr16 62 114 846479 846478 F 53 0.00 1364 reject_low 15 ALIGNMENT 0 YS2-10d13.p1k chr01 114 62 164094 164093 C 53 0.00 1364 reject_low 13 ALIGNMENT 572 YS2-10d13.q1k chr10 1209 43 482325 483491 C 1167 84.83 1348 reject_low 20 ALIGNMENT 906 YS2-10d13.q1k chr04 43 1246 514074 515277 F 1204 93.52 1348 ambiguous_trans 4 ALIGNMENT 918 YS2-10d13.q1k chr04 1246 43 876182 877385 C 1204 93.85 1348 ambiguous_trans 7 ALIGNMENT 301 YS2-10d13.p1k chr07 1003 115 564808 565697 C 889 78.52 1364 reject_low 27 ALIGNMENT 815 YS2-10d13.q1k chr04 43 1209 878689 879855 F 1167 91.77 1348 reject_low 23 ALIGNMENT 830 YS2-10d13.q1k chr01 43 1209 160633 161799 F 1167 92.20 1348 reject_low 13 ALIGNMENT 1042 YS2-10d13.p1k chr14 1302 31 564744 566023 C 1272 94.18 1364 ambiguous_trans 6 ALIGNMENT 809 YS2-10d13.q1k chr16 43 1209 851020 852186 F 1167 91.60 1348 reject_low 19 ALIGNMENT 915 YS2-10d13.q1k chr06 1246 43 142274 143477 C 1204 93.77 1348 ambiguous_trans 2 ALIGNMENT 0 YS2-10d13.p1k chr10 62 114 480032 480031 F 53 0.00 1364 reject_low 20 ALIGNMENT 1061 YS2-10d13.p1k chr04 1302 31 516395 517674 C 1272 94.73 1364 ambiguous_trans 4 ALIGNMENT 304 YS2-10d13.p1k chr10 115 1003 480032 480921 F 889 78.63 1364 reject_low 20 ALIGNMENT 815 YS2-10d13.q1k chr08 43 1209 543999 545165 F 1167 91.77 1348 reject_low 24 ALIGNMENT 0 YS2-10d13.p1k chr16 414 62 854180 854179 C 353 0.00 1364 reject_low 19 ALIGNMENT 0 YS2-10d13.p1k chr13 62 114 186235 186234 F 53 0.00 1364 reject_low 14 ALIGNMENT 806 YS2-10d13.q1k chr13 1209 43 200695 201861 C 1167 91.52 1348 reject_low 16 ALIGNMENT 729 YS2-10d14.q1k chr12 1310 30 10006 11320 C 1281 87.59 1351 reject_low 13 ALIGNMENT 0 YS2-10d14.p1k chr02 593 612 4112 4107 F 20 0.00 1364 reject_low 14 ALIGNMENT 666 YS2-10d14.q1k chr12 144 1246 1071642 1072780 F 1103 88.49 1351 reject_low 11 ALIGNMENT 0 YS2-10d14.p1k chr02 62 482 4033 4032 F 421 0.00 1364 reject_low 14 ALIGNMENT 24 YS2-10d14.p1k chr08 642 613 558694 558723 C 30 93.33 1364 reject_low 17 ALIGNMENT 750 YS2-10d14.q1k chr14 1246 75 5483 6691 C 1172 89.76 1351 ambiguous_tel 1 ALIGNMENT 885 YS2-10d14.p1k chr05 1198 32 572088 573258 C 1167 92.97 1364 reject_low 3 ALIGNMENT 0 YS2-10d14.p1k chr12 62 482 9367 9366 F 421 0.00 1364 reject_low 20 ALIGNMENT 689 YS2-10d14.q1k chr12 1310 97 4471 5714 C 1214 87.56 1351 reject_low 16 ALIGNMENT 745 YS2-10d14.q1k chr06 1310 30 3509 4805 C 1281 87.98 1351 reject_low 12 ALIGNMENT 0 YS2-10d14.p1k chr16 704 643 944225 944240 C 62 0.00 1364 reject_low 18 ALIGNMENT 0 YS2-10d14.p1k chr06 62 482 2869 2868 F 421 0.00 1364 reject_low 12 ALIGNMENT 29 YS2-10d14.p1k chr13 560 592 3754 3786 F 33 96.97 1364 reject_low 15 ALIGNMENT 0 YS2-10d14.q1k chr13 100 62 5589 5588 C 39 0.00 1351 reject_low 15 ALIGNMENT 700 YS2-10d14.q1k chr13 1310 101 4347 5588 C 1210 87.77 1351 reject_low 15 ALIGNMENT 884 YS2-10d14.p1k chr09 32 1198 4021 5192 F 1167 92.89 1364 reject_low 8 ALIGNMENT 0 YS2-10d14.p1k chr12 593 612 3911 3906 F 20 0.00 1364 reject_low 13,16 ALIGNMENT 675 YS2-10d14.q1k chr05 1235 335 5448 6338 C 901 93.01 1351 reject_low 9 ALIGNMENT 0 YS2-10d14.p1k chr08 539 559 3620 3609 F 21 0.00 1364 reject_low 19 ALIGNMENT 24 YS2-10d14.p1k chr16 642 613 944241 944270 C 30 93.33 1364 reject_low 18 ALIGNMENT 29 YS2-10d14.p1k chr16 592 560 944267 944299 C 33 96.97 1364 reject_low 18 ALIGNMENT 0 YS2-10d14.p1k chr13 593 612 3787 3782 F 20 0.00 1364 reject_low 15 ALIGNMENT 780 YS2-10d14.p1k chr12 880 32 1067125 1067967 C 849 97.76 1364 reject_low 10 ALIGNMENT 50 YS2-10d14.p1k chr16 761 705 944168 944224 C 57 96.49 1364 reject_low 18 ALIGNMENT 56 YS2-10d14.p1k chr02 483 538 4033 4088 F 56 100.00 1364 reject_low 14 ALIGNMENT 0 YS2-10d14.p1k chr16 559 539 944300 944289 C 21 0.00 1364 reject_low 18 ALIGNMENT 721 YS2-10d14.q1k chr16 1310 154 5330 6525 C 1157 88.94 1351 reject_low 2 ALIGNMENT 56 YS2-10d14.p1k chr08 483 538 3564 3619 F 56 100.00 1364 reject_low 19 ALIGNMENT 885 YS2-10d14.p1k chr14 32 1198 3633 4803 F 1167 92.89 1364 ambiguous_tel 1 ALIGNMENT 50 YS2-10d14.p1k chr08 705 761 3685 3741 F 57 96.49 1364 reject_low 19 ALIGNMENT 24 YS2-10d14.p1k chr02 613 642 4108 4137 F 30 93.33 1364 reject_low 14 ALIGNMENT 0 YS2-10d14.p1k chr06 593 612 2948 2943 F 20 0.00 1364 reject_low 12 ALIGNMENT 0 YS2-10d14.q1k chr12 62 143 1071642 1071641 F 82 0.00 1351 reject_low 11 ALIGNMENT 50 YS2-10d14.p1k chr12 705 761 9488 9544 F 57 96.49 1364 reject_low 20 ALIGNMENT 0 YS2-10d14.p1k chr13 62 482 3708 3707 F 421 0.00 1364 reject_low 15 ALIGNMENT 0 YS2-10d14.q1k chr05 62 153 570325 570324 F 92 0.00 1351 reject_low 3 ALIGNMENT 24 YS2-10d14.p1k chr13 613 642 3783 3812 F 30 93.33 1364 reject_low 15 ALIGNMENT 856 YS2-10d14.q1k chr12 30 1310 1065027 1066290 F 1281 90.94 1351 ambiguous_tel 0 ALIGNMENT 885 YS2-10d14.p1k chr04 1137 32 1527324 1528429 C 1106 94.21 1364 reject_low 4 ALIGNMENT 717 YS2-10d14.q1k chr05 154 1246 570325 571425 F 1093 90.30 1351 reject_low 3 ALIGNMENT 885 YS2-10d14.p1k chr07 1198 32 1086165 1087335 C 1167 92.97 1364 reject_low 7 ALIGNMENT 24 YS2-10d14.p1k chr12 613 642 9442 9471 F 30 93.33 1364 reject_low 20 ALIGNMENT 0 YS2-10d14.p1k chr12 643 704 9472 9487 F 62 0.00 1364 reject_low 20 ALIGNMENT 29 YS2-10d14.p1k chr02 560 592 4079 4111 F 33 96.97 1364 reject_low 14 ALIGNMENT 29 YS2-10d14.p1k chr06 560 592 2915 2947 F 33 96.97 1364 reject_low 12 ALIGNMENT 0 YS2-10d14.p1k chr12 593 612 9446 9441 F 20 0.00 1364 reject_low 20 ALIGNMENT 0 YS2-10d14.p1k chr13 539 559 3764 3753 F 21 0.00 1364 reject_low 15 ALIGNMENT 24 YS2-10d14.p1k chr12 613 642 3907 3936 F 30 93.33 1364 reject_low 13,16 ALIGNMENT 0 YS2-10d14.p1k chr12 985 881 1067098 1067124 C 105 0.00 1364 reject_low 10 ALIGNMENT 56 YS2-10d14.p1k chr12 483 538 3832 3887 F 56 100.00 1364 reject_low 13,16 ALIGNMENT 0 YS2-10d14.p1k chr02 539 559 4089 4078 F 21 0.00 1364 reject_low 14 ALIGNMENT 56 YS2-10d14.p1k chr16 538 483 944290 944345 C 56 100.00 1364 reject_low 18 ALIGNMENT 0 YS2-10d14.p1k chr02 643 704 4138 4153 F 62 0.00 1364 reject_low 14 ALIGNMENT 0 YS2-10d14.q1k chr02 147 62 5852 5851 C 86 0.00 1351 reject_low 14 ALIGNMENT 56 YS2-10d14.p1k chr08 538 483 558743 558798 C 56 100.00 1364 reject_low 17 ALIGNMENT 885 YS2-10d14.p1k chr12 1137 32 1073525 1074630 C 1106 94.21 1364 ambiguous_tel 0 ALIGNMENT 50 YS2-10d14.p1k chr12 705 761 3953 4009 F 57 96.49 1364 reject_low 13,16 ALIGNMENT 0 YS2-10d14.p1k chr16 482 62 944346 944345 C 421 0.00 1364 reject_low 18 ALIGNMENT 50 YS2-10d14.p1k chr13 705 761 3829 3885 F 57 96.49 1364 reject_low 15 ALIGNMENT 53 YS2-10d14.p1k chr13 483 538 3708 3763 F 56 98.21 1364 reject_low 15 ALIGNMENT 836 YS2-10d14.q1k chr08 33 1310 556853 558159 F 1278 90.14 1351 reject_low 17 ALIGNMENT 0 YS2-10d14.q1k chr15 62 153 1084616 1084615 F 92 0.00 1351 reject_low 6 ALIGNMENT 57 YS2-10d14.p1k chr05 986 1198 4586 4807 F 213 77.46 1364 reject_low 9 ALIGNMENT 0 YS2-10d14.q1k chr05 334 62 6339 6338 C 273 0.00 1351 reject_low 9 ALIGNMENT 703 YS2-10d14.q1k chr04 52 1235 1525354 1526569 F 1184 88.43 1351 reject_low 4 ALIGNMENT 0 YS2-10d14.p1k chr08 559 539 558753 558742 C 21 0.00 1364 reject_low 17 ALIGNMENT 50 YS2-10d14.p1k chr08 761 705 558621 558677 C 57 96.49 1364 reject_low 17 ALIGNMENT 24 YS2-10d14.p1k chr08 613 642 3639 3668 F 30 93.33 1364 reject_low 19 ALIGNMENT 0 YS2-10d14.q1k chr12 96 62 5715 5714 C 35 0.00 1351 reject_low 16 ALIGNMENT 0 YS2-10d14.p1k chr06 539 559 2925 2914 F 21 0.00 1364 reject_low 12 ALIGNMENT 0 YS2-10d14.p1k chr08 612 593 558724 558719 C 20 0.00 1364 reject_low 17 ALIGNMENT 596 YS2-10d14.q1k chr07 154 955 1084352 1085204 F 802 92.14 1351 reject_low 7 ALIGNMENT 667 YS2-10d14.q1k chr15 154 1310 1084616 1085806 F 1157 87.64 1351 reject_low 6 ALIGNMENT 0 YS2-10d14.p1k chr13 643 704 3813 3828 F 62 0.00 1364 reject_low 15 ALIGNMENT 787 YS2-10d14.q1k chr02 1310 148 4672 5851 C 1163 90.71 1351 reject_low 14 ALIGNMENT 724 YS2-10d14.p1k chr05 32 880 3697 4558 F 849 95.64 1364 reject_low 9 ALIGNMENT 0 YS2-10d14.p1k chr08 704 643 558678 558693 C 62 0.00 1364 reject_low 17 ALIGNMENT 0 YS2-10d14.p1k chr05 881 895 4559 4555 F 15 0.00 1364 reject_low 9 ALIGNMENT 29 YS2-10d14.p1k chr08 592 560 558720 558752 C 33 96.97 1364 reject_low 17 ALIGNMENT 0 YS2-10d14.q1k chr07 62 153 1084352 1084351 F 92 0.00 1351 reject_low 7 ALIGNMENT 50 YS2-10d14.p1k chr02 705 761 4154 4210 F 57 96.49 1364 reject_low 14 ALIGNMENT 22 YS2-10d14.p1k chr05 896 929 4556 4589 F 34 88.24 1364 reject_low 9 ALIGNMENT 54 YS2-10d14.p1k chr12 1137 986 1066941 1067097 C 152 80.26 1364 reject_low 10 ALIGNMENT 885 YS2-10d14.p1k chr16 32 1198 3542 4712 F 1167 92.89 1364 reject_low 2 ALIGNMENT 0 YS2-10d14.p1k chr06 643 704 2974 2989 F 62 0.00 1364 reject_low 12 ALIGNMENT 425 YS2-10d14.q1k chr16 448 1235 942804 943633 F 788 86.55 1351 reject_low 18 ALIGNMENT 29 YS2-10d14.p1k chr08 560 592 3610 3642 F 33 96.97 1364 reject_low 19 ALIGNMENT 885 YS2-10d14.p1k chr15 1137 32 1086489 1087594 C 1106 94.21 1364 reject_low 6 ALIGNMENT 29 YS2-10d14.p1k chr12 560 592 9413 9445 F 33 96.97 1364 reject_low 20 ALIGNMENT 56 YS2-10d14.p1k chr06 483 538 2869 2924 F 56 100.00 1364 reject_low 12 ALIGNMENT 29 YS2-10d14.p1k chr12 560 592 3878 3910 F 33 96.97 1364 reject_low 13,16 ALIGNMENT 884 YS2-10d14.p1k chr10 32 1198 4004 5175 F 1167 92.89 1364 reject_low 5 ALIGNMENT 0 YS2-10d14.p1k chr16 612 593 944271 944266 C 20 0.00 1364 reject_low 18 ALIGNMENT 0 YS2-10d14.p1k chr08 482 62 558799 558798 C 421 0.00 1364 reject_low 17 ALIGNMENT 56 YS2-10d14.p1k chr12 483 538 9367 9422 F 56 100.00 1364 reject_low 20 ALIGNMENT 0 YS2-10d14.p1k chr08 593 612 3643 3638 F 20 0.00 1364 reject_low 19 ALIGNMENT 0 YS2-10d14.p1k chr12 539 559 3888 3877 F 21 0.00 1364 reject_low 13,16 ALIGNMENT 50 YS2-10d14.p1k chr06 705 761 2990 3046 F 57 96.49 1364 reject_low 12 ALIGNMENT 0 YS2-10d14.p1k chr12 539 559 9423 9412 F 21 0.00 1364 reject_low 20 ALIGNMENT 0 YS2-10d14.p1k chr12 643 704 3937 3952 F 62 0.00 1364 reject_low 13,16 ALIGNMENT 0 YS2-10d14.p1k chr08 62 482 3564 3563 F 421 0.00 1364 reject_low 19 ALIGNMENT 0 YS2-10d14.q1k chr10 201 62 6932 6931 C 140 0.00 1351 reject_low 5 ALIGNMENT 0 YS2-10d14.p1k chr08 643 704 3669 3684 F 62 0.00 1364 reject_low 19 ALIGNMENT 24 YS2-10d14.p1k chr06 613 642 2944 2973 F 30 93.33 1364 reject_low 12 ALIGNMENT 0 YS2-10d14.q1k chr16 62 447 942804 942803 F 386 0.00 1351 reject_low 18 ALIGNMENT 0 YS2-10d14.q1k chr16 153 62 6526 6525 C 92 0.00 1351 reject_low 2 ALIGNMENT 599 YS2-10d14.q1k chr10 1310 202 5793 6931 C 1109 86.65 1351 reject_low 5 ALIGNMENT 0 YS2-10d14.p1k chr12 62 482 3832 3831 F 421 0.00 1364 reject_low 13,16 ALIGNMENT 0 YS2-10d14.p1k chr05 930 985 4590 4585 F 56 0.00 1364 reject_low 9 ALIGNMENT 886 YS2-10d15.q1k chr03 1048 40 19729 20750 C 1009 97.42 1309 accept 0 ALIGNMENT 1042 YS2-10d15.p1k chr03 29 1227 16009 17219 F 1199 96.41 1352 accept 0 ALIGNMENT 886 YS2-10d18.q1k chr10 31 1074 106625 107682 F 1044 95.59 1229 accept 0 ALIGNMENT 24 YS2-10d18.q1k chr11 551 628 131533 131610 F 78 78.21 1229 reject_low 1 ALIGNMENT 0 YS2-10d18.q1k chr11 62 550 131533 131532 F 489 0.00 1229 reject_low 1 ALIGNMENT 43 YS2-10d18.q1k chr11 708 874 131690 131856 F 167 76.05 1229 reject_low 1 ALIGNMENT 1002 YS2-10d18.p1k chr10 1265 38 110985 112219 C 1228 94.95 1321 accept 0 ALIGNMENT 0 YS2-10d18.q1k chr11 629 707 131611 131689 F 79 0.00 1229 reject_low 1 ALIGNMENT 41 YS2-10d19.q1k vc_4 827 867 5831 5871 F 41 100.00 1298 reject_low 15 ALIGNMENT 0 YS2-10d19.q1k vc_4 866 62 5813 5812 C 805 0.00 1298 reject_low 9 ALIGNMENT 244 YS2-10d19.q1k vc_2 867 1205 2164 2512 F 339 92.04 1298 reject_low 11 ALIGNMENT 0 YS2-10d19.p1k vc_2 835 62 2106 2105 C 774 0.00 1322 reject_low 5 ALIGNMENT 38 YS2-10d19.q1k vc_7 830 867 63 100 F 38 100.00 1298 reject_low 21 ALIGNMENT 0 YS2-10d19.q1k vc_4 62 866 126 125 F 805 0.00 1298 reject_low 14 ALIGNMENT 36 YS2-10d19.q1k vc_5 864 829 1 36 C 36 100.00 1298 reject_low 24 ALIGNMENT 258 YS2-10d19.p1k vc_5 1264 836 4610 5025 C 429 89.74 1322 reject_low 3 ALIGNMENT 0 YS2-10d19.q1k vc_5 828 62 5064 5063 C 767 0.00 1298 reject_low 20 ALIGNMENT 0 YS2-10d19.q1k vc_1 826 62 2513 2512 C 765 0.00 1298 reject_low 17 ALIGNMENT 0 YS2-10d19.q1k vc_7 1025 62 6412 6411 C 964 0.00 1298 reject_low 23 ALIGNMENT 0 YS2-10d19.q1k vc_5 828 62 37 36 C 767 0.00 1298 reject_low 24 ALIGNMENT 0 YS2-10d19.q1k vc_4 866 62 1535 1534 C 805 0.00 1298 reject_low 16 ALIGNMENT 41 YS2-10d19.q1k vc_1 867 827 2472 2512 C 41 100.00 1298 reject_low 17 ALIGNMENT 38 YS2-10d19.q1k vc_7 830 867 13525 13562 F 38 100.00 1298 reject_low 22 ALIGNMENT 755 YS2-10d19.q1k chr10 39 826 684152 684939 F 788 99.75 1298 accept_chi 0 ALIGNMENT 0 YS2-10d19.p1k vc_6 62 1070 3585 3584 F 1009 0.00 1322 reject_low 13 ALIGNMENT 0 YS2-10d19.q1k vc_7 62 829 13525 13524 F 768 0.00 1298 reject_low 22 ALIGNMENT 0 YS2-10d19.p1k vc_5 835 62 5026 5025 C 774 0.00 1322 reject_low 3 ALIGNMENT 0 YS2-10d19.p1k vc_7 62 835 100 99 F 774 0.00 1322 reject_low 2 ALIGNMENT 244 YS2-10d19.q1k vc_5 867 1205 2398 2746 F 339 92.04 1298 reject_low 3 ALIGNMENT 0 YS2-10d19.q1k chr10 827 879 684939 684938 F 53 0.00 1298 accept_chi 0 ALIGNMENT 64 YS2-10d19.q1k vc_7 1232 1076 5004 5172 C 157 82.80 1298|0,1 reject_low 23 ALIGNMENT 50 YS2-10d19.q1k vc_7 1077 1026 6360 6411 C 52 98.08 1298|1,0 reject_low 23 ALIGNMENT 0 YS2-10d19.p1k vc_3 835 62 2106 2105 C 774 0.00 1322 reject_low 6 ALIGNMENT 0 YS2-10d19.q1k vc_3 826 62 2513 2512 C 765 0.00 1298 reject_low 19 ALIGNMENT 228 YS2-10d19.p1k vc_4 836 1201 5871 6223 F 366 90.71 1322 reject_low 8 ALIGNMENT 131 YS2-10d19.q1k vc_4 867 1027 6353 6514 F 161 95.03 1298|1,0 reject_low 15 ALIGNMENT 0 YS2-10d19.q1k vc_7 1076 1077 5172 6360 C 0 0.00 1298 reject_low 23 ALIGNMENT 0 YS2-10d19.p1k chr10 846 818 684153 684152 C 29 0.00 1322 accept_chi 1 ALIGNMENT 0 YS2-10d19.q1k vc_4 868 867 5872 6353 F 0 0.00 1298 reject_low 15 ALIGNMENT 0 YS2-10d19.q1k vc_5 62 866 2398 2397 F 805 0.00 1298 reject_low 3 ALIGNMENT 258 YS2-10d19.p1k vc_7 836 1264 13562 13977 F 429 89.74 1322 reject_low 7 ALIGNMENT 0 YS2-10d19.q1k vc_2 826 62 2146 2145 C 765 0.00 1298 reject_low 18 ALIGNMENT 0 YS2-10d19.q1k vc_3 62 866 2531 2530 F 805 0.00 1298 reject_low 12 ALIGNMENT 237 YS2-10d19.q1k vc_4 1232 867 5432 5812 C 366 90.16 1298 reject_low 9 ALIGNMENT 244 YS2-10d19.q1k vc_7 1232 867 2349 2727 C 366 90.71 1298 reject_low 2 ALIGNMENT 0 YS2-10d19.p1k vc_7 62 835 13562 13561 F 774 0.00 1322 reject_low 7 ALIGNMENT 258 YS2-10d19.p1k vc_7 836 1264 100 515 F 429 89.74 1322 reject_low 2 ALIGNMENT 258 YS2-10d19.p1k vc_2 1264 836 1690 2105 C 429 89.74 1322 reject_low 5 ALIGNMENT 102 YS2-10d19.p1k vc_6 1071 1264 3585 3771 F 194 87.11 1322 reject_low 13 ALIGNMENT 0 YS2-10d19.q1k vc_4 62 826 5831 5830 F 765 0.00 1298 reject_low 15 ALIGNMENT 258 YS2-10d19.p1k vc_3 1264 836 1690 2105 C 429 89.74 1322 reject_low 6 ALIGNMENT 41 YS2-10d19.q1k vc_3 867 827 2472 2512 C 41 100.00 1298 reject_low 19 ALIGNMENT 131 YS2-10d19.q1k vc_4 867 1027 126 287 F 161 95.03 1298 reject_low 14 ALIGNMENT 0 YS2-10d19.q1k vc_2 62 866 2164 2163 F 805 0.00 1298 reject_low 11 ALIGNMENT 0 YS2-10d19.p1k vc_4 62 835 5871 5870 F 774 0.00 1322 reject_low 8 ALIGNMENT 753 YS2-10d19.p1k chr10 817 29 684152 684939 C 789 99.75 1322 accept_chi 1 ALIGNMENT 39 YS2-10d19.q1k vc_5 867 829 5025 5063 C 39 100.00 1298 reject_low 20 ALIGNMENT 0 YS2-10d19.q1k vc_1 62 866 2531 2530 F 805 0.00 1298 reject_low 10 ALIGNMENT 0 YS2-10d19.q1k vc_7 866 62 2728 2727 C 805 0.00 1298 reject_low 2 ALIGNMENT 0 YS2-10d19.q1k vc_5 879 865 2 1 C 15 0.00 1298 reject_low 24 ALIGNMENT 0 YS2-10d19.q1k vc_7 62 829 63 62 F 768 0.00 1298 reject_low 21 ALIGNMENT 75 YS2-10d19.q1k vc_4 955 867 1446 1534 C 89 96.63 1298 reject_low 16 ALIGNMENT 258 YS2-10d19.p1k vc_1 1264 836 1690 2105 C 429 89.74 1322 reject_low 4 ALIGNMENT 41 YS2-10d19.q1k vc_2 867 827 2105 2145 C 41 100.00 1298 reject_low 18 ALIGNMENT 244 YS2-10d19.q1k vc_1 867 1205 2531 2879 F 339 92.04 1298 reject_low 10 ALIGNMENT 244 YS2-10d19.q1k vc_3 867 1205 2531 2879 F 339 92.04 1298 reject_low 12 ALIGNMENT 0 YS2-10d19.p1k vc_1 835 62 2106 2105 C 774 0.00 1322 reject_low 4 ALIGNMENT 1018 YS2-10d20.p1k chr04 31 1177 1229234 1230388 F 1147 97.30 1289 accept 0 ALIGNMENT 924 YS2-10d20.q1k chr07 1238 40 18740 19945 C 1199 93.49 1300 ambiguous_tel 1 ALIGNMENT 984 YS2-10d21.q1k chr12 31 1251 30623 31829 F 1221 95.41 1276 accept 0 ALIGNMENT 1016 YS2-10d21.p1k chr12 1195 27 33833 35016 C 1169 97.43 1238 accept 0 ALIGNMENT 1043 YS2-10d23.p1k chr10 1249 31 235215 236430 C 1219 95.82 1249 accept 0 ALIGNMENT 1019 YS2-10d23.q1k chr10 34 1190 230905 232060 F 1157 96.80 1195 accept 0 ALIGNMENT 1008 YS2-10d24.p1k chr07 1201 31 484221 485390 C 1171 96.75 1252 accept 0 ALIGNMENT 425 YS2-10d24.q1k chr16 1091 39 483330 484383 C 1053 80.34 1231 reject_low 1 ALIGNMENT 1034 YS2-10d24.q1k chr07 39 1226 481216 482410 F 1188 96.30 1231 accept 0 ALIGNMENT 981 YS2-10e01.q1k chr16 1144 40 577334 578451 C 1105 96.92 1275 accept 0 ALIGNMENT 1023 YS2-10e01.p1k chr16 29 1228 573036 574246 F 1200 95.83 1280 accept 0 ALIGNMENT 0 YS2-10e02.q1k vc_7 62 626 13525 13524 F 565 0.00 664 reject_low 5 ALIGNMENT 0 YS2-10e02.q1k vc_5 625 62 5064 5063 C 564 0.00 664 reject_low 4 ALIGNMENT 40 YS2-10e02.q1k vc_4 625 664 5832 5871 F 40 100.00 664 reject_low 3 ALIGNMENT 38 YS2-10e02.q1k vc_7 627 664 13525 13562 F 38 100.00 664 reject_low 5 ALIGNMENT 40 YS2-10e02.q1k vc_1 664 625 2472 2511 C 40 100.00 664 reject_low 1 ALIGNMENT 36 YS2-10e02.q1k vc_5 661 626 1 36 C 36 100.00 664 reject_low 6 ALIGNMENT 0 YS2-10e02.q1k vc_5 625 62 37 36 C 564 0.00 664 reject_low 6 ALIGNMENT 0 YS2-10e02.q1k vc_1 624 62 2512 2511 C 563 0.00 664 reject_low 1 ALIGNMENT 584 YS2-10e02.q1k chr15 25 624 913405 914004 F 600 99.83 664 accept 0 ALIGNMENT 40 YS2-10e02.q1k vc_3 664 625 2472 2511 C 40 100.00 664 reject_low 2 ALIGNMENT 0 YS2-10e02.q1k vc_4 62 624 5832 5831 F 563 0.00 664 reject_low 3 ALIGNMENT 39 YS2-10e02.q1k vc_5 664 626 5025 5063 C 39 100.00 664 reject_low 4 ALIGNMENT 0 YS2-10e02.p1k chr15 642 625 913410 913409 C 18 0.00 642 accept 0 ALIGNMENT 0 YS2-10e02.q1k vc_3 624 62 2512 2511 C 563 0.00 664 reject_low 2 ALIGNMENT 580 YS2-10e02.p1k chr15 624 31 913409 914002 C 594 100.00 642 accept 0 ALIGNMENT 0 YS2-10e02.q1k chr15 625 664 914004 914003 F 40 0.00 664 accept 0 ALIGNMENT 958 YS2-10e03.p1k chr08 31 1112 120613 121708 F 1082 96.12 1275 accept 0 ALIGNMENT 938 YS2-10e03.q1k chr08 1133 40 123807 124914 C 1094 95.89 1282 accept 0 ALIGNMENT 0 YS2-10e04.p1k chr05 213 231 182087 182086 F 19 0.00 231 accept_chi 1 ALIGNMENT 0 YS2-10e04.q1k vc_3 222 62 2513 2512 C 161 0.00 263 reject_low 4 ALIGNMENT 36 YS2-10e04.q1k vc_5 260 225 1 36 C 36 100.00 263 reject_low 8 ALIGNMENT 38 YS2-10e04.q1k vc_7 226 263 13525 13562 F 38 100.00 263 reject_low 7 ALIGNMENT 0 YS2-10e04.q1k vc_5 224 62 37 36 C 163 0.00 263 reject_low 8 ALIGNMENT 41 YS2-10e04.q1k vc_2 263 223 2105 2145 C 41 100.00 263 reject_low 3 ALIGNMENT 0 YS2-10e04.q1k vc_7 62 225 13525 13524 F 164 0.00 263 reject_low 7 ALIGNMENT 41 YS2-10e04.q1k vc_3 263 223 2472 2512 C 41 100.00 263 reject_low 4 ALIGNMENT 41 YS2-10e04.q1k vc_1 263 223 2472 2512 C 41 100.00 263 reject_low 2 ALIGNMENT 39 YS2-10e04.q1k vc_5 263 225 5025 5063 C 39 100.00 263 reject_low 6 ALIGNMENT 0 YS2-10e04.q1k chr05 263 223 181906 181905 C 41 0.00 263 accept_chi 0 ALIGNMENT 0 YS2-10e04.q1k vc_5 224 62 5064 5063 C 163 0.00 263 reject_low 6 ALIGNMENT 181 YS2-10e04.q1k chr05 222 40 181905 182087 C 183 100.00 263 accept_chi 0 ALIGNMENT 0 YS2-10e04.q1k vc_4 62 222 5831 5830 F 161 0.00 263 reject_low 5 ALIGNMENT 0 YS2-10e04.q1k vc_1 222 62 2513 2512 C 161 0.00 263 reject_low 2 ALIGNMENT 41 YS2-10e04.q1k vc_4 223 263 5831 5871 F 41 100.00 263 reject_low 5 ALIGNMENT 179 YS2-10e04.p1k chr05 32 212 181907 182087 F 181 100.00 231 accept_chi 1 ALIGNMENT 0 YS2-10e04.q1k vc_2 222 62 2146 2145 C 161 0.00 263 reject_low 3 ALIGNMENT 926 YS2-10e05.q1k chr15 41 1139 504813 505918 F 1099 94.90 1321 accept 0 ALIGNMENT 1078 YS2-10e05.p1k chr15 1279 37 508478 509722 C 1243 96.06 1352 accept 0 ALIGNMENT 1048 YS2-10e06.p1k chr16 1196 35 246929 248093 C 1162 97.33 1342 accept 0 ALIGNMENT 0 YS2-10e06.q1k chr05 62 508 118578 118577 F 447 0.00 1364 reject_low 1 ALIGNMENT 21 YS2-10e06.q1k chr05 509 541 118578 118610 F 33 96.97 1364 reject_low 1 ALIGNMENT 0 YS2-10e06.q1k chr05 542 923 118610 118609 F 382 0.00 1364 reject_low 1 ALIGNMENT 961 YS2-10e06.q1k chr16 41 1174 243775 244913 F 1134 95.33 1364 accept 0 ALIGNMENT 935 YS2-10e07.q1k chr12 1056 40 728832 729863 C 1017 97.84 1380 accept 0 ALIGNMENT 931 YS2-10e07.p1k chr12 33 1115 727786 728882 F 1083 95.11 1308 accept 0 ALIGNMENT 0 YS2-10e08.p1k chr09 87 918 336420 336419 F 832 0.00 1342 reject_low 4 ALIGNMENT 0 YS2-10e08.p1k chr10 918 517 416457 416456 C 402 0.00 1342 reject_low 15 ALIGNMENT 0 YS2-10e08.p1k chr07 84 918 544652 544651 F 835 0.00 1342 reject_low 10 ALIGNMENT 52 YS2-10e08.p1k chr13 83 31 463553 463605 C 53 100.00 1342 reject_low 14 ALIGNMENT 0 YS2-10e08.p1k chr10 918 84 355373 355372 C 835 0.00 1342 reject_low 12 ALIGNMENT 0 YS2-10e08.p1k chr12 918 86 793917 793916 C 833 0.00 1342 reject_low 5 ALIGNMENT 0 YS2-10e08.p1k chr07 918 84 531615 531614 C 835 0.00 1342 reject_low 9 ALIGNMENT 0 YS2-10e08.p1k chr12 918 85 427133 427132 C 834 0.00 1342 reject_low 6 ALIGNMENT 0 YS2-10e08.p1k chr13 918 84 463554 463553 C 835 0.00 1342 reject_low 14 ALIGNMENT 0 YS2-10e08.p1k chr10 84 918 374411 374410 F 835 0.00 1342 reject_low 13 ALIGNMENT 54 YS2-10e08.p1k chr12 85 31 793916 793970 C 55 100.00 1342 reject_low 5 ALIGNMENT 0 YS2-10e08.p1k chr04 495 918 434690 434689 F 424 0.00 1342 reject_low 1 ALIGNMENT 53 YS2-10e08.p1k chr12 84 31 427132 427185 C 54 100.00 1342 reject_low 6 ALIGNMENT 52 YS2-10e08.p1k chr10 31 83 374359 374411 F 53 100.00 1342 reject_low 13 ALIGNMENT 0 YS2-10e08.p1k chr10 471 62 416500 416499 C 410 0.00 1342 reject_low 15 ALIGNMENT 55 YS2-10e08.p1k chr09 31 86 336365 336420 F 56 100.00 1342 reject_low 4 ALIGNMENT 0 YS2-10e08.p1k chr11 84 388 513046 513337 F 305 0.00 1342 reject_low 17 ALIGNMENT 1052 YS2-10e08.p1k chr15 1214 31 570819 572010 C 1184 97.64 1342 accept 0 ALIGNMENT 0 YS2-10e08.p1k chr14 76 918 519163 519162 F 843 0.00 1342 reject_low 16 ALIGNMENT 52 YS2-10e08.p1k chr09 31 83 324320 324372 F 53 100.00 1342 reject_low 11 ALIGNMENT 52 YS2-10e08.p1k chr07 31 83 544600 544652 F 53 100.00 1342 reject_low 10 ALIGNMENT 0 YS2-10e08.p1k chr10 918 88 204649 204648 C 831 0.00 1342 reject_low 2 ALIGNMENT 52 YS2-10e08.p1k chr07 83 31 531614 531666 C 53 100.00 1342 reject_low 9 ALIGNMENT 0 YS2-10e08.p1k chr11 519 918 513467 513466 F 400 0.00 1342 reject_low 17 ALIGNMENT 52 YS2-10e08.p1k chr02 83 31 405954 406006 C 53 100.00 1342 reject_low 7 ALIGNMENT 0 YS2-10e08.p1k chr04 62 233 434420 434419 F 172 0.00 1342 reject_low 1 ALIGNMENT 0 YS2-10e08.p1k chr04 918 84 568962 568961 C 835 0.00 1342 reject_low 8 ALIGNMENT 23 YS2-10e08.p1k chr10 516 472 416456 416499 C 45 86.67 1342 reject_low 15 ALIGNMENT 0 YS2-10e08.p1k chr10 918 88 541419 541418 C 831 0.00 1342 reject_low 3 ALIGNMENT 56 YS2-10e08.p1k chr10 87 31 541418 541474 C 57 100.00 1342 reject_low 3 ALIGNMENT 952 YS2-10e08.q1k chr15 40 1140 567614 568730 F 1101 96.46 1433 accept 0 ALIGNMENT 24 YS2-10e08.p1k chr11 389 518 513338 513467 F 130 77.69 1342 reject_low 17 ALIGNMENT 40 YS2-10e08.p1k chr04 234 494 434420 434690 F 261 75.10 1342 reject_low 1 ALIGNMENT 52 YS2-10e08.p1k chr11 31 83 512993 513045 F 53 100.00 1342 reject_low 17 ALIGNMENT 0 YS2-10e08.p1k chr02 918 84 405955 405954 C 835 0.00 1342 reject_low 7 ALIGNMENT 0 YS2-10e08.p1k chr09 84 918 324372 324371 F 835 0.00 1342 reject_low 11 ALIGNMENT 52 YS2-10e08.p1k chr04 83 31 568961 569013 C 53 100.00 1342 reject_low 8 ALIGNMENT 52 YS2-10e08.p1k chr10 83 31 355372 355424 C 53 100.00 1342 reject_low 12 ALIGNMENT 44 YS2-10e08.p1k chr14 31 75 519119 519163 F 45 100.00 1342 reject_low 16 ALIGNMENT 56 YS2-10e08.p1k chr10 87 31 204648 204704 C 57 100.00 1342 reject_low 2 ALIGNMENT 910 YS2-10e09.p1k chr02 1057 34 378208 379247 C 1024 97.46 1339 accept 0 ALIGNMENT 1006 YS2-10e09.q1k chr02 30 1145 376586 377709 F 1116 97.40 1445 accept 0 ALIGNMENT 1014 YS2-10e10.p1k chr04 1187 32 1269568 1270735 C 1156 96.89 1352 accept 0 ALIGNMENT 968 YS2-10e10.q1k chr04 39 1199 1266356 1267530 F 1161 95.00 1439 accept 0 ALIGNMENT 1008 YS2-10e11.p1k chr07 31 1259 812381 813626 F 1229 95.28 1355 ambiguous_trans 7 ALIGNMENT 1025 YS2-10e11.p1k chr15 1259 31 707849 709094 C 1229 95.69 1355 ambiguous_trans 0 ALIGNMENT 0 YS2-10e11.p1k chr10 62 748 479627 479626 F 687 0.00 1355 reject_low 28 ALIGNMENT 472 YS2-10e11.q1k chr12 594 1 655559 656156 C 594 93.10 873 reject_low 14 ALIGNMENT 504 YS2-10e11.q1k chr15 1 596 704652 705251 F 596 94.80 873 ambiguous_trans 0 ALIGNMENT 1008 YS2-10e11.p1k chr06 31 1259 138837 140082 F 1229 95.28 1355 ambiguous_trans 5 ALIGNMENT 0 YS2-10e11.p1k chr12 62 748 652488 652487 F 687 0.00 1355 reject_low 14 ALIGNMENT 504 YS2-10e11.q1k chr04 596 1 876588 877187 C 596 94.80 873 ambiguous_trans 1 ALIGNMENT 498 YS2-10e11.q1k chr14 1 596 562621 563220 F 596 94.46 873 ambiguous_trans 10 ALIGNMENT 1008 YS2-10e11.p1k chr07 1259 31 572530 573775 C 1229 95.28 1355 ambiguous_trans 6 ALIGNMENT 498 YS2-10e11.q1k chr04 1 596 514272 514871 F 596 94.46 873 ambiguous_trans 4 ALIGNMENT 67 YS2-10e11.p1k chr04 1089 749 882212 882553 C 341 73.31 1355 reject_low 13 ALIGNMENT 355 YS2-10e11.q1k chr13 594 1 201066 201663 C 594 86.53 873 reject_low 25 ALIGNMENT 1002 YS2-10e11.p1k chr03 31 1259 85739 86984 F 1229 95.12 1355 ambiguous_trans 9 ALIGNMENT 504 YS2-10e11.q1k chr15 596 1 975054 975653 C 596 94.80 873 ambiguous_trans 2 ALIGNMENT 1010 YS2-10e11.p1k chr12 31 1259 942118 943363 F 1229 95.28 1355 ambiguous_trans 3 ALIGNMENT 0 YS2-10e11.p1k chr01 748 62 164499 164498 C 687 0.00 1355 reject_low 26 ALIGNMENT 1019 YS2-10e11.p1k chr04 31 1259 872745 873990 F 1229 95.52 1355 ambiguous_trans 1 ALIGNMENT 501 YS2-10e11.q1k chr12 596 1 945961 946560 C 596 94.63 873 ambiguous_trans 3 ALIGNMENT 495 YS2-10e11.q1k chr02 596 1 34413 35012 C 596 94.30 873 ambiguous_trans 8 ALIGNMENT 1002 YS2-10e11.p1k chr14 1259 31 565818 567063 C 1229 95.12 1355 ambiguous_trans 10 ALIGNMENT 460 YS2-10e11.q1k chr16 1 594 805230 805827 F 594 92.42 873 reject_low 20 ALIGNMENT 64 YS2-10e11.p1k chr10 749 1089 479627 479968 F 341 73.02 1355 reject_low 28 ALIGNMENT 385 YS2-10e11.q1k chr16 1 594 851218 851815 F 594 88.22 873 reject_low 24 ALIGNMENT 391 YS2-10e11.q1k chr13 594 1 188899 189496 C 594 88.55 873 reject_low 22 ALIGNMENT 496 YS2-10e11.q1k chr04 1 594 878887 879484 F 594 94.44 873 reject_low 13 ALIGNMENT 501 YS2-10e11.q1k chr04 1 596 646086 646685 F 596 94.63 873 reject_low 16 ALIGNMENT 472 YS2-10e11.q1k chr04 594 1 1211425 1212022 C 594 93.10 873 reject_low 18 ALIGNMENT 498 YS2-10e11.q1k chr06 596 1 142680 143279 C 596 94.46 873 ambiguous_trans 5 ALIGNMENT 0 YS2-10e11.p1k chr07 731 62 566120 566119 C 670 0.00 1355 reject_low 15 ALIGNMENT 61 YS2-10e11.p1k chr12 749 1089 652488 652829 F 341 72.73 1355 reject_low 14 ALIGNMENT 1008 YS2-10e11.p1k chr02 31 1259 30570 31815 F 1229 95.28 1355 ambiguous_trans 8 ALIGNMENT 66 YS2-10e11.p1k chr07 1089 732 565761 566119 C 358 72.91 1355 reject_low 15 ALIGNMENT 498 YS2-10e11.q1k chr03 596 1 89582 90181 C 596 94.46 873 ambiguous_trans 9 ALIGNMENT 1008 YS2-10e11.p1k chr04 1259 31 517469 518714 C 1229 95.28 1355 ambiguous_trans 4 ALIGNMENT 409 YS2-10e11.q1k chr10 594 1 477112 477709 C 594 89.56 873 reject_low 21 ALIGNMENT 391 YS2-10e11.q1k chr16 594 1 849146 849743 C 594 88.55 873 reject_low 23 ALIGNMENT 64 YS2-10e11.p1k chr04 1089 749 990633 990974 C 341 73.02 1355 reject_low 27 ALIGNMENT 471 YS2-10e11.q1k chr14 596 1 523875 524474 C 596 92.95 873 reject_low 17 ALIGNMENT 0 YS2-10e11.p1k chr04 748 62 990975 990974 C 687 0.00 1355 reject_low 27 ALIGNMENT 460 YS2-10e11.q1k chr12 594 1 597878 598475 C 594 92.42 873 reject_low 19 ALIGNMENT 1010 YS2-10e11.p1k chr04 31 1259 982094 983339 F 1229 95.28 1355 reject_low 12 ALIGNMENT 1019 YS2-10e11.p1k chr15 31 1259 971211 972456 F 1229 95.52 1355 ambiguous_trans 2 ALIGNMENT 1019 YS2-10e11.p1k chr12 1259 31 979522 980767 C 1229 95.52 1355 reject_low 11 ALIGNMENT 64 YS2-10e11.p1k chr01 1089 749 164157 164498 C 341 73.02 1355 reject_low 26 ALIGNMENT 498 YS2-10e11.q1k chr07 1 596 569332 569931 F 596 94.46 873 ambiguous_trans 6 ALIGNMENT 498 YS2-10e11.q1k chr07 596 1 816224 816823 C 596 94.46 873 ambiguous_trans 7 ALIGNMENT 0 YS2-10e11.p1k chr04 748 62 882554 882553 C 687 0.00 1355 reject_low 13 ALIGNMENT 460 YS2-10e11.q1k chr07 1 594 562436 563033 F 594 92.42 873 reject_low 15 ALIGNMENT 0 YS2-10e13.p1k chr12 710 62 482163 482162 C 649 0.00 1359 reject_low 4 ALIGNMENT 0 YS2-10e13.p1k chr12 695 62 489482 489481 C 634 0.00 1359 reject_low 2 ALIGNMENT 390 YS2-10e13.p1k chr12 1220 711 468412 468930 C 510 93.53 1359 reject_low 1 ALIGNMENT 1021 YS2-10e13.q1k chr12 38 1333 455307 456593 F 1296 93.60 1522 accept 0 ALIGNMENT 0 YS2-10e13.p1k chr12 710 62 485815 485814 C 649 0.00 1359 reject_low 5 ALIGNMENT 128 YS2-10e13.p1k chr12 829 696 489348 489481 C 134 98.51 1359 reject_low 2 ALIGNMENT 119 YS2-10e13.p1k chr12 829 711 485696 485814 C 119 100.00 1359 reject_low 5 ALIGNMENT 119 YS2-10e13.p1k chr12 829 711 472464 472582 C 119 100.00 1359 reject_low 3 ALIGNMENT 119 YS2-10e13.p1k chr12 829 711 482044 482162 C 119 100.00 1359 reject_low 4 ALIGNMENT 0 YS2-10e13.p1k chr12 710 62 468931 468930 C 649 0.00 1359 reject_low 1 ALIGNMENT 865 YS2-10e13.p1k chr12 1220 39 459275 460499 C 1182 93.06 1359 accept 0 ALIGNMENT 0 YS2-10e13.p1k chr12 710 62 472583 472582 C 649 0.00 1359 reject_low 3 ALIGNMENT 1015 YS2-10e13.q1k chr12 38 1318 464444 465713 F 1281 93.60 1522 reject_low 1 ALIGNMENT 41 YS2-10e15.q1k vc_4 285 325 5831 5871 F 41 100.00 325 reject_low 4 ALIGNMENT 41 YS2-10e15.q1k vc_1 325 285 2472 2512 C 41 100.00 325 reject_low 2 ALIGNMENT 39 YS2-10e15.q1k vc_5 325 287 5025 5063 C 39 100.00 325 reject_low 5 ALIGNMENT 41 YS2-10e15.q1k vc_3 325 285 2472 2512 C 41 100.00 325 reject_low 3 ALIGNMENT 237 YS2-10e15.p1k chr11 286 31 218100 218356 C 256 99.61 303 accept_chi 1 ALIGNMENT 0 YS2-10e15.q1k vc_7 62 287 13525 13524 F 226 0.00 325 reject_low 6 ALIGNMENT 0 YS2-10e15.q1k vc_5 286 62 37 36 C 225 0.00 325 reject_low 7 ALIGNMENT 0 YS2-10e15.q1k vc_5 286 62 5064 5063 C 225 0.00 325 reject_low 5 ALIGNMENT 0 YS2-10e15.q1k chr11 285 325 218356 218355 F 41 0.00 325 accept_chi 0 ALIGNMENT 36 YS2-10e15.q1k vc_5 322 287 1 36 C 36 100.00 325 reject_low 7 ALIGNMENT 0 YS2-10e15.p1k chr11 303 287 218101 218100 C 17 0.00 303 accept_chi 1 ALIGNMENT 38 YS2-10e15.q1k vc_7 288 325 13525 13562 F 38 100.00 325 reject_low 6 ALIGNMENT 0 YS2-10e15.q1k vc_3 284 62 2513 2512 C 223 0.00 325 reject_low 3 ALIGNMENT 241 YS2-10e15.q1k chr11 28 284 218100 218356 F 257 100.00 325 accept_chi 0 ALIGNMENT 0 YS2-10e15.q1k vc_4 62 284 5831 5830 F 223 0.00 325 reject_low 4 ALIGNMENT 0 YS2-10e15.q1k vc_1 284 62 2513 2512 C 223 0.00 325 reject_low 2 ALIGNMENT 0 YS2-10e17.q1k chr12 884 159 592731 592730 C 726 0.00 1306 reject_low 7 ALIGNMENT 0 YS2-10e17.q1k chr05 884 165 443410 443409 C 720 0.00 1306 reject_low 1 ALIGNMENT 0 YS2-10e17.q1k chr13 884 160 357026 357025 C 725 0.00 1306 reject_low 16 ALIGNMENT 0 YS2-10e17.q1k chr13 884 165 372713 372712 C 720 0.00 1306 reject_low 3 ALIGNMENT 0 YS2-10e17.q1k chr14 884 160 632022 632021 C 725 0.00 1306 reject_low 30 ALIGNMENT 41 YS2-10e17.q1k chr16 65 164 850214 850320 F 100 83.00 1306 reject_low 6 ALIGNMENT 32 YS2-10e17.q1k chr10 159 67 354471 354570 C 93 80.65 1306 reject_low 22 ALIGNMENT 37 YS2-10e17.q1k chr13 159 65 357025 357126 C 95 82.11 1306 reject_low 16 ALIGNMENT 0 YS2-10e17.q1k chr14 76 62 632111 632110 C 15 0.00 1306 reject_low 30 ALIGNMENT 41 YS2-10e17.q1k chr07 164 65 817414 817520 C 100 83.00 1306 reject_low 2 ALIGNMENT 40 YS2-10e17.q1k chr12 159 65 475996 476097 C 95 83.16 1306 reject_low 11 ALIGNMENT 31 YS2-10e17.q1k chr16 159 65 810246 810347 C 95 80.00 1306 reject_low 27 ALIGNMENT 34 YS2-10e17.q1k chr03 159 65 124152 124253 C 95 81.05 1306 reject_low 20 ALIGNMENT 0 YS2-10e17.q1k chr03 884 160 168617 168616 C 725 0.00 1306 reject_low 21 ALIGNMENT 32 YS2-10e17.q1k chr12 157 65 976277 976374 C 93 80.65 1306 reject_low 25 ALIGNMENT 1075 YS2-10e17.p1k chr13 1303 29 749773 751056 C 1275 95.61 1345 accept 0 ALIGNMENT 41 YS2-10e17.q1k chr13 164 65 372712 372818 C 100 83.00 1306 reject_low 3 ALIGNMENT 0 YS2-10e17.q1k chr16 165 884 850320 850319 F 720 0.00 1306 reject_low 6 ALIGNMENT 41 YS2-10e17.q1k chr16 65 164 844623 844729 F 100 83.00 1306 reject_low 5 ALIGNMENT 30 YS2-10e17.q1k chr16 60 164 804533 804639 F 105 80.95 1306 reject_low 15 ALIGNMENT 0 YS2-10e17.q1k chr05 884 158 135632 135631 C 727 0.00 1306 reject_low 23 ALIGNMENT 0 YS2-10e17.q1k chr13 884 160 362608 362607 C 725 0.00 1306 reject_low 17 ALIGNMENT 0 YS2-10e17.q1k chr10 884 160 354472 354471 C 725 0.00 1306 reject_low 22 ALIGNMENT 0 YS2-10e17.q1k chr16 884 160 810247 810246 C 725 0.00 1306 reject_low 27 ALIGNMENT 34 YS2-10e17.q1k chr03 159 65 168616 168717 C 95 81.05 1306 reject_low 21 ALIGNMENT 0 YS2-10e17.q1k chr16 884 160 850647 850646 C 725 0.00 1306 reject_low 12 ALIGNMENT 1001 YS2-10e17.q1k chr13 38 1177 748003 749152 F 1140 96.23 1306 accept 0 ALIGNMENT 0 YS2-10e17.q1k chr04 884 160 434442 434441 C 725 0.00 1306 reject_low 18 ALIGNMENT 41 YS2-10e17.q1k chr05 164 65 443409 443515 C 100 83.00 1306 reject_low 1 ALIGNMENT 38 YS2-10e17.q1k chr08 164 65 549322 549428 C 100 82.00 1306 reject_low 10 ALIGNMENT 37 YS2-10e17.q1k chr13 159 65 362607 362708 C 95 82.11 1306 reject_low 17 ALIGNMENT 36 YS2-10e17.q1k chr03 65 110 151726 151771 F 46 93.48 1306 reject_low 19 ALIGNMENT 0 YS2-10e17.q1k chr13 884 165 378301 378300 C 720 0.00 1306 reject_low 4 ALIGNMENT 29 YS2-10e17.q1k chr05 157 65 435965 436062 C 93 79.57 1306 reject_low 28 ALIGNMENT 36 YS2-10e17.q1k chr04 159 64 434441 434542 C 96 81.25 1306 reject_low 18 ALIGNMENT 0 YS2-10e17.q1k chr16 884 160 804663 804662 C 725 0.00 1306 reject_low 26 ALIGNMENT 0 YS2-10e17.q1k chr03 111 884 151771 151770 F 774 0.00 1306 reject_low 19 ALIGNMENT 0 YS2-10e17.q1k chr08 884 165 549323 549322 C 720 0.00 1306 reject_low 10 ALIGNMENT 26 YS2-10e17.q1k chr14 159 77 632021 632110 C 83 79.52 1306 reject_low 30 ALIGNMENT 0 YS2-10e17.q1k chr12 884 158 976278 976277 C 727 0.00 1306 reject_low 25 ALIGNMENT 0 YS2-10e17.q1k chr12 884 160 475997 475996 C 725 0.00 1306 reject_low 11 ALIGNMENT 0 YS2-10e17.q1k chr07 884 165 561864 561863 C 720 0.00 1306 reject_low 14 ALIGNMENT 0 YS2-10e17.q1k chr03 163 884 149789 149788 F 722 0.00 1306 reject_low 8 ALIGNMENT 31 YS2-10e17.q1k chr16 159 65 804662 804763 C 95 80.00 1306 reject_low 26 ALIGNMENT 38 YS2-10e17.q1k chr05 164 65 498095 498201 C 100 82.00 1306 reject_low 9 ALIGNMENT 0 YS2-10e17.q1k chr04 884 165 878315 878314 C 720 0.00 1306 reject_low 13 ALIGNMENT 0 YS2-10e17.q1k chr05 884 165 498096 498095 C 720 0.00 1306 reject_low 9 ALIGNMENT 32 YS2-10e17.q1k chr05 157 65 135631 135728 C 93 80.65 1306 reject_low 23 ALIGNMENT 38 YS2-10e17.q1k chr12 158 60 592730 592833 C 99 82.83 1306 reject_low 7 ALIGNMENT 41 YS2-10e17.q1k chr13 164 65 378300 378406 C 100 83.00 1306 reject_low 4 ALIGNMENT 0 YS2-10e17.q1k chr07 111 884 817335 817334 F 774 0.00 1306 reject_low 29 ALIGNMENT 0 YS2-10e17.q1k chr07 884 165 817415 817414 C 720 0.00 1306 reject_low 2 ALIGNMENT 32 YS2-10e17.q1k chr07 157 65 568768 568865 C 93 80.65 1306 reject_low 24 ALIGNMENT 0 YS2-10e17.q1k chr07 884 158 568769 568768 C 727 0.00 1306 reject_low 24 ALIGNMENT 35 YS2-10e17.q1k chr04 164 65 878314 878420 C 100 81.00 1306 reject_low 13 ALIGNMENT 30 YS2-10e17.q1k chr07 65 110 817290 817335 F 46 89.13 1306 reject_low 29 ALIGNMENT 0 YS2-10e17.q1k chr03 884 160 124153 124152 C 725 0.00 1306 reject_low 20 ALIGNMENT 0 YS2-10e17.q1k chr05 884 158 435966 435965 C 727 0.00 1306 reject_low 28 ALIGNMENT 35 YS2-10e17.q1k chr07 164 65 561863 561969 C 100 81.00 1306 reject_low 14 ALIGNMENT 35 YS2-10e17.q1k chr03 60 162 149680 149789 F 103 80.58 1306 reject_low 8 ALIGNMENT 0 YS2-10e17.q1k chr16 165 884 804639 804638 F 720 0.00 1306 reject_low 15 ALIGNMENT 0 YS2-10e17.q1k chr16 165 884 844729 844728 F 720 0.00 1306 reject_low 5 ALIGNMENT 40 YS2-10e17.q1k chr16 159 65 850646 850747 C 95 83.16 1306 reject_low 12 ALIGNMENT 0 YS2-10e20.q1k vc_7 53 54 5172 6360 C 0 0.00 654 reject_vc 9 ALIGNMENT 478 YS2-10e20.q1k vc_5 1 640 2556 3206 F 640 92.50 654 reject_vc 2 ALIGNMENT 0 YS2-10e20.p1k chr13 481 498 852494 852493 F 18 0.00 498 manual 1 ALIGNMENT 247 YS2-10e20.q1k vc_7 303 53 4922 5172 C 251 99.60 654|0,1 reject_vc 9 ALIGNMENT 0 YS2-10e20.q1k vc_7 304 304 4700 4921 C 1 0.00 654 reject_vc 9 ALIGNMENT 0 YS2-10e20.q1k vc_4 62 237 1548 1547 F 176 0.00 654 reject_vc 8 ALIGNMENT 91 YS2-10e20.q1k vc_7 414 305 4590 4699 C 110 95.45 654 reject_vc 9 ALIGNMENT 388 YS2-10e20.q1k vc_4 414 1 5239 5654 C 414 98.31 654 reject_vc 4 ALIGNMENT 0 YS2-10e20.q1k vc_4 305 307 1615 1878 F 3 0.00 654 reject_vc 8 ALIGNMENT 302 YS2-10e20.q1k vc_3 1 303 2689 2991 F 303 100.00 654 reject_vc 7 ALIGNMENT 262 YS2-10e20.p1k chr05 306 33 502595 502868 C 274 99.64 498 manual 0 ALIGNMENT 65 YS2-10e20.q1k vc_4 304 238 46 112 C 67 100.00 654 reject_low 10 ALIGNMENT 302 YS2-10e20.q1k vc_2 1 303 2322 2624 F 303 100.00 654 reject_vc 6 ALIGNMENT 171 YS2-10e20.p1k chr13 306 480 852320 852494 F 175 100.00 498 manual 1 ALIGNMENT 169 YS2-10e20.q1k vc_4 308 640 1879 2222 F 333 85.59 654 reject_vc 8 ALIGNMENT 0 YS2-10e20.p1k chr13 62 305 852320 852319 F 244 0.00 498 manual 1 ALIGNMENT 51 YS2-10e20.q1k vc_7 54 3 6360 6411 C 52 100.00 654|1,0 reject_vc 9 ALIGNMENT 302 YS2-10e20.q1k vc_1 1 303 2689 2991 F 303 100.00 654 reject_vc 5 ALIGNMENT 0 YS2-10e20.q1k vc_4 237 62 113 112 C 176 0.00 654 reject_low 10 ALIGNMENT 0 YS2-10e20.q1k vc_4 237 62 6340 6339 C 176 0.00 654 reject_low 11 ALIGNMENT 65 YS2-10e20.q1k vc_4 238 304 1548 1614 F 67 100.00 654 reject_vc 8 ALIGNMENT 65 YS2-10e20.q1k vc_4 304 238 6273 6339 C 67 100.00 654 reject_low 11 ALIGNMENT 0 YS2-10e20.p1k chr05 498 307 502596 502595 C 192 0.00 498 manual 0 ALIGNMENT 474 YS2-10e20.q1k vc_7 621 1 1941 2569 C 621 92.91 654 reject_vc 3 ALIGNMENT 958 YS2-10e21.q1k chr07 51 1117 781875 782954 F 1067 97.47 1346 accept 0 ALIGNMENT 1039 YS2-10e21.p1k chr07 1218 36 785613 786809 C 1183 96.11 1290 accept 0 ALIGNMENT 950 YS2-10e22.q1k chr11 38 1148 265163 266284 F 1111 95.86 1364 accept 0 ALIGNMENT 1000 YS2-10e22.p1k chr11 1230 35 269174 270376 C 1196 95.15 1284 accept 0 ALIGNMENT 545 YS2-10e23.q1k chr16 1213 557 2860 3527 C 657 94.82 1231|0,2 ambiguous_tel 3 ALIGNMENT 0 YS2-10e23.q1k chr05 114 62 4590 4589 C 53 0.00 1231 reject_low 9 ALIGNMENT 0 YS2-10e23.p1k chr08 922 62 558747 558746 C 861 0.00 1257 reject_low 34 ALIGNMENT 53 YS2-10e23.q1k chr06 338 282 2990 3046 C 57 98.25 1231 reject_low 16 ALIGNMENT 29 YS2-10e23.q1k chr12 483 451 3878 3910 C 33 96.97 1231 reject_low 18 ALIGNMENT 794 YS2-10e23.p1k chr12 843 33 1074645 1075455 C 811 99.38 1257|2,0 reject_low 6 ALIGNMENT 545 YS2-10e23.q1k chr14 1213 557 2951 3618 C 657 94.82 1231|0,2 ambiguous_tel 2 ALIGNMENT 0 YS2-10e23.p1k chr05 844 861 3682 3681 F 18 0.00 1257 reject_low 9 ALIGNMENT 600 YS2-10e23.q1k chr16 505 1213 944290 945009 F 709 95.35 1231 reject_low 30 ALIGNMENT 846 YS2-10e23.p1k chr16 895 33 944290 945152 C 863 99.42 1257 reject_low 23 ALIGNMENT 609 YS2-10e23.q1k chr06 1213 505 2205 2924 C 709 95.77 1231 reject_low 16 ALIGNMENT 24 YS2-10e23.p1k chr12 923 949 3884 3910 F 27 96.30 1257 reject_low 35 ALIGNMENT 0 YS2-10e23.p1k chr12 62 922 9419 9418 F 861 0.00 1257 reject_low 36 ALIGNMENT 0 YS2-10e23.q1k chr12 450 431 9446 9441 C 20 0.00 1231 reject_low 19 ALIGNMENT 794 YS2-10e23.p1k chr15 843 33 1087609 1088419 C 811 99.38 1257|2,0 reject_low 5 ALIGNMENT 0 YS2-10e23.q1k chr13 281 62 3886 3885 C 220 0.00 1231 reject_low 21 ALIGNMENT 238 YS2-10e23.p1k chr05 840 1213 4163 4529 F 374 89.57 1257 reject_low 24 ALIGNMENT 545 YS2-10e23.q1k chr05 1213 557 3015 3682 C 657 94.82 1231|0,2 reject_low 9 ALIGNMENT 238 YS2-10e23.p1k chr12 1213 840 1067154 1067520 C 374 89.57 1257|0,2 reject_low 10 ALIGNMENT 226 YS2-10e23.p1k chr15 1192 840 1086802 1087147 C 353 89.52 1257|0,2 reject_low 5 ALIGNMENT 791 YS2-10e23.p1k chr07 843 33 1087350 1088160 C 811 99.26 1257|2,0 reject_low 8 ALIGNMENT 791 YS2-10e23.p1k chr05 843 33 573273 574083 C 811 99.26 1257|2,0 reject_low 7 ALIGNMENT 791 YS2-10e23.p1k chr14 33 843 2808 3618 F 811 99.26 1257 ambiguous_tel 2 ALIGNMENT 485 YS2-10e23.q1k chr05 40 560 572291 572811 F 521 97.89 1231|0,2 reject_low 7,14 ALIGNMENT 0 YS2-10e23.p1k chr14 844 861 3618 3617 F 18 0.00 1257 ambiguous_tel 2 ALIGNMENT 53 YS2-10e23.q1k chr16 282 338 944168 944224 F 57 98.25 1231 reject_low 23,30 ALIGNMENT 24 YS2-10e23.p1k chr12 923 949 9419 9445 F 27 96.30 1257 reject_low 36 ALIGNMENT 0 YS2-10e23.q1k chr08 504 484 3620 3609 C 21 0.00 1231 reject_low 20 ALIGNMENT 24 YS2-10e23.p1k chr16 949 923 944267 944293 C 27 96.30 1257 reject_low 38 ALIGNMENT 603 YS2-10e23.q1k chr12 1213 505 3168 3887 C 709 95.49 1231 reject_low 18 ALIGNMENT 0 YS2-10e23.p1k chr12 841 842 1067519 1067983 C 0 0.00 1257 reject_low 10 ALIGNMENT 0 YS2-10e23.q1k chr05 164 150 4559 4554 C 15 0.00 1231 reject_low 9 ALIGNMENT 29 YS2-10e23.q1k chr16 451 483 944267 944299 F 33 96.97 1231 reject_low 23,30 ALIGNMENT 852 YS2-10e23.p1k chr06 33 895 2062 2924 F 863 99.65 1257 reject_low 16 ALIGNMENT 0 YS2-10e23.q1k chr05 561 880 572811 572810 F 320 0.00 1231 reject_low 7 ALIGNMENT 0 YS2-10e23.q1k chr08 431 450 558724 558719 F 20 0.00 1231 reject_low 22,29 ALIGNMENT 388 YS2-10e23.q1k chr12 165 560 1067125 1067520 F 396 99.49 1231|0,2 reject_low 6,10 ALIGNMENT 0 YS2-10e23.q1k chr12 400 339 9472 9487 C 62 0.00 1231 reject_low 19 ALIGNMENT 0 YS2-10e23.q1k chr12 281 62 9545 9544 C 220 0.00 1231 reject_low 19 ALIGNMENT 0 YS2-10e23.q1k chr04 559 558 1527981 1528445 F 0 0.00 1231 reject_low 11 ALIGNMENT 29 YS2-10e23.q1k chr12 483 451 9413 9445 C 33 96.97 1231 reject_low 19 ALIGNMENT 0 YS2-10e23.q1k chr16 339 400 944225 944240 F 62 0.00 1231 reject_low 23,30 ALIGNMENT 0 YS2-10e23.q1k chr12 62 114 1067094 1067093 F 53 0.00 1231 reject_low 6,10 ALIGNMENT 0 YS2-10e23.q1k chr12 559 558 1067519 1067983 F 0 0.00 1231 reject_low 6 ALIGNMENT 0 YS2-10e23.q1k chr08 400 339 3669 3684 C 62 0.00 1231 reject_low 20 ALIGNMENT 0 YS2-10e23.q1k chr12 504 484 9423 9412 C 21 0.00 1231 reject_low 19 ALIGNMENT 0 YS2-10e23.q1k chr06 400 339 2974 2989 C 62 0.00 1231 reject_low 16 ALIGNMENT 0 YS2-10e23.q1k chr16 484 880 944299 944298 F 397 0.00 1231 reject_low 23 ALIGNMENT 24 YS2-10e23.q1k chr02 430 401 4108 4137 C 30 93.33 1231 reject_low 17 ALIGNMENT 600 YS2-10e23.q1k chr08 1213 505 2900 3619 C 709 95.35 1231 reject_low 20 ALIGNMENT 0 YS2-10e23.p1k chr07 841 842 1086887 1087351 C 0 0.00 1257 reject_low 8 ALIGNMENT 0 YS2-10e23.q1k chr08 281 62 3742 3741 C 220 0.00 1231 reject_low 20 ALIGNMENT 53 YS2-10e23.q1k chr12 338 282 3953 4009 C 57 98.25 1231 reject_low 18 ALIGNMENT 0 YS2-10e23.q1k chr02 281 62 4211 4210 C 220 0.00 1231 reject_low 17 ALIGNMENT 603 YS2-10e23.q1k chr12 1213 505 8703 9422 C 709 95.49 1231 reject_low 19 ALIGNMENT 788 YS2-10e23.p1k chr12 843 33 1067982 1068792 C 811 99.14 1257|2,0 reject_low 10 ALIGNMENT 0 YS2-10e23.q1k chr16 484 504 944300 944289 F 21 0.00 1231 reject_low 30 ALIGNMENT 24 YS2-10e23.q1k chr12 430 401 3907 3936 C 30 93.33 1231 reject_low 18 ALIGNMENT 53 YS2-10e23.q1k chr13 338 282 3829 3885 C 57 98.25 1231 reject_low 21 ALIGNMENT 0 YS2-10e23.p1k chr08 62 922 3616 3615 F 861 0.00 1257 reject_low 33 ALIGNMENT 0 YS2-10e23.p1k chr06 62 922 2921 2920 F 861 0.00 1257 reject_low 32 ALIGNMENT 235 YS2-10e23.p1k chr09 843 1213 4471 4834 F 371 89.49 1257 reject_low 25 ALIGNMENT 0 YS2-10e23.q1k chr12 281 62 4010 4009 C 220 0.00 1231 reject_low 18 ALIGNMENT 53 YS2-10e23.q1k chr08 338 282 3685 3741 C 57 98.25 1231 reject_low 20 ALIGNMENT 606 YS2-10e23.q1k chr02 1213 505 3369 4088 C 709 95.63 1231 reject_low 17 ALIGNMENT 0 YS2-10e23.p1k chr16 844 861 3527 3526 F 18 0.00 1257 ambiguous_tel 3 ALIGNMENT 794 YS2-10e23.p1k chr04 843 33 1528444 1529254 C 811 99.38 1257|2,0 reject_low 4 ALIGNMENT 53 YS2-10e23.q1k chr12 338 282 9488 9544 C 57 98.25 1231 reject_low 19 ALIGNMENT 0 YS2-10e23.p1k chr12 841 842 1074182 1074646 C 0 0.00 1257 reject_low 6 ALIGNMENT 0 YS2-10e23.p1k chr09 62 842 4471 4470 F 781 0.00 1257 reject_low 25 ALIGNMENT 0 YS2-10e23.p1k chr09 844 861 4006 4005 F 18 0.00 1257 ambiguous_tel 1 ALIGNMENT 497 YS2-10e23.q1k chr04 40 560 1527462 1527982 F 521 98.66 1231|0,2 reject_low 4,11 ALIGNMENT 0 YS2-10e23.q1k chr16 62 281 944168 944167 F 220 0.00 1231 reject_low 23,30 ALIGNMENT 788 YS2-10e23.p1k chr10 33 843 3179 3989 F 811 99.14 1257 ambiguous_tel 0 ALIGNMENT 0 YS2-10e23.p1k chr12 62 922 3884 3883 F 861 0.00 1257 reject_low 35 ALIGNMENT 497 YS2-10e23.q1k chr15 40 560 1086627 1087147 F 521 98.66 1231|0,2 reject_low 5,13 ALIGNMENT 0 YS2-10e23.p1k chr04 841 842 1527981 1528445 C 0 0.00 1257 reject_low 4 ALIGNMENT 0 YS2-10e23.p1k chr05 841 842 572810 573274 C 0 0.00 1257 reject_low 7 ALIGNMENT 29 YS2-10e23.q1k chr13 483 451 3754 3786 C 33 96.97 1231 reject_low 21 ALIGNMENT 0 YS2-10e23.p1k chr15 841 842 1087146 1087610 C 0 0.00 1257 reject_low 5 ALIGNMENT 0 YS2-10e23.q1k chr07 559 558 1086887 1087351 F 0 0.00 1231 reject_low 15 ALIGNMENT 0 YS2-10e23.q1k chr08 484 504 558753 558742 F 21 0.00 1231 reject_low 29 ALIGNMENT 545 YS2-10e23.q1k chr09 1213 557 3339 4006 C 657 94.82 1231|0,1 ambiguous_tel 1 ALIGNMENT 0 YS2-10e23.q1k chr08 450 431 3643 3638 C 20 0.00 1231 reject_low 20 ALIGNMENT 0 YS2-10e23.q1k chr04 561 880 1527982 1527981 F 320 0.00 1231 reject_low 4 ALIGNMENT 24 YS2-10e23.q1k chr08 401 430 558694 558723 F 30 93.33 1231 reject_low 22,29 ALIGNMENT 24 YS2-10e23.p1k chr08 949 923 558720 558746 C 27 96.30 1257 reject_low 34 ALIGNMENT 0 YS2-10e23.q1k chr06 450 431 2948 2943 C 20 0.00 1231 reject_low 16 ALIGNMENT 227 YS2-10e23.p1k chr07 1192 840 1086543 1086888 C 353 89.52 1257|0,2 reject_low 8 ALIGNMENT 846 YS2-10e23.p1k chr08 895 33 558743 559605 C 863 99.42 1257 reject_low 22 ALIGNMENT 0 YS2-10e23.q1k chr07 561 880 1086888 1086887 F 320 0.00 1231 reject_low 8 ALIGNMENT 24 YS2-10e23.q1k chr06 430 401 2944 2973 C 30 93.33 1231 reject_low 16 ALIGNMENT 0 YS2-10e23.q1k chr05 559 558 572810 573274 F 0 0.00 1231 reject_low 14 ALIGNMENT 226 YS2-10e23.p1k chr04 1192 840 1527637 1527982 C 353 89.52 1257|0,2 reject_low 4 ALIGNMENT 0 YS2-10e23.q1k chr08 339 400 558678 558693 F 62 0.00 1231 reject_low 22,29 ALIGNMENT 227 YS2-10e23.p1k chr14 840 1192 4080 4425 F 353 89.52 1257 reject_low 27 ALIGNMENT 29 YS2-10e23.q1k chr05 149 115 4555 4589 C 35 94.29 1231 reject_low 9 ALIGNMENT 0 YS2-10e23.q1k chr12 150 164 1067129 1067124 F 15 0.00 1231 reject_low 6,10 ALIGNMENT 0 YS2-10e23.p1k chr16 922 62 944294 944293 C 861 0.00 1257 reject_low 38 ALIGNMENT 0 YS2-10e23.p1k chr05 62 839 4163 4162 F 778 0.00 1257 reject_low 24 ALIGNMENT 29 YS2-10e23.q1k chr02 483 451 4079 4111 C 33 96.97 1231 reject_low 17 ALIGNMENT 594 YS2-10e23.q1k chr13 1213 505 3044 3763 C 709 95.06 1231 reject_low 21 ALIGNMENT 0 YS2-10e23.q1k chr14 558 559 3617 4081 C 0 0.00 1231 ambiguous_tel 2 ALIGNMENT 545 YS2-10e23.q1k chr05 557 1213 573273 573940 F 657 94.82 1231|2,0 reject_low 14 ALIGNMENT 24 YS2-10e23.p1k chr08 923 949 3616 3642 F 27 96.30 1257 reject_low 33 ALIGNMENT 24 YS2-10e23.q1k chr12 430 401 9442 9471 C 30 93.33 1231 reject_low 19 ALIGNMENT 548 YS2-10e23.q1k chr10 1213 557 3322 3989 C 657 94.98 1231|0,1 ambiguous_tel 0 ALIGNMENT 837 YS2-10e23.p1k chr08 33 895 2757 3619 F 863 99.07 1257 reject_low 20 ALIGNMENT 840 YS2-10e23.p1k chr13 33 895 2901 3763 F 863 99.19 1257 reject_low 21 ALIGNMENT 0 YS2-10e23.q1k chr16 431 450 944271 944266 F 20 0.00 1231 reject_low 23,30 ALIGNMENT 227 YS2-10e23.p1k chr05 1192 840 572466 572811 C 353 89.52 1257|0,2 reject_low 7 ALIGNMENT 0 YS2-10e23.q1k chr08 484 880 558752 558751 F 397 0.00 1231 reject_low 22 ALIGNMENT 0 YS2-10e23.q1k chr02 504 484 4089 4078 C 21 0.00 1231 reject_low 17 ALIGNMENT 0 YS2-10e23.q1k chr02 450 431 4112 4107 C 20 0.00 1231 reject_low 17 ALIGNMENT 548 YS2-10e23.q1k chr04 557 1213 1528444 1529111 F 657 94.98 1231|2,0 reject_low 11 ALIGNMENT 226 YS2-10e23.p1k chr12 1192 840 1073838 1074183 C 353 89.52 1257|0,2 reject_low 6 ALIGNMENT 227 YS2-10e23.p1k chr16 840 1192 3989 4334 F 353 89.52 1257 reject_low 28 ALIGNMENT 24 YS2-10e23.p1k chr02 923 949 4085 4111 F 27 96.30 1257 reject_low 31 ALIGNMENT 29 YS2-10e23.q1k chr08 483 451 3610 3642 C 33 96.97 1231 reject_low 20 ALIGNMENT 497 YS2-10e23.q1k chr12 40 560 1073663 1074183 F 521 98.66 1231|0,2 reject_low 12 ALIGNMENT 846 YS2-10e23.p1k chr02 33 895 3226 4088 F 863 99.42 1257 reject_low 17 ALIGNMENT 0 YS2-10e23.q1k chr12 450 431 3911 3906 C 20 0.00 1231 reject_low 18 ALIGNMENT 53 YS2-10e23.q1k chr08 282 338 558621 558677 F 57 98.25 1231 reject_low 22,29 ALIGNMENT 0 YS2-10e23.q1k chr10 557 558 3989 4453 C 0 0.00 1231 ambiguous_tel 0 ALIGNMENT 0 YS2-10e23.p1k chr13 62 922 3760 3759 F 861 0.00 1257 reject_low 37 ALIGNMENT 0 YS2-10e23.q1k chr12 400 339 3937 3952 C 62 0.00 1231 reject_low 18 ALIGNMENT 53 YS2-10e23.q1k chr02 338 282 4154 4210 C 57 98.25 1231 reject_low 17 ALIGNMENT 0 YS2-10e23.p1k chr10 844 861 3989 3988 F 18 0.00 1257 ambiguous_tel 0 ALIGNMENT 29 YS2-10e23.q1k chr06 483 451 2915 2947 C 33 96.97 1231 reject_low 16 ALIGNMENT 548 YS2-10e23.q1k chr15 557 1213 1087609 1088276 F 657 94.98 1231|2,0 reject_low 13 ALIGNMENT 0 YS2-10e23.p1k chr02 62 922 4085 4084 F 861 0.00 1257 reject_low 31 ALIGNMENT 0 YS2-10e23.p1k chr10 62 842 4454 4453 F 781 0.00 1257 reject_low 26 ALIGNMENT 24 YS2-10e23.p1k chr06 923 949 2921 2947 F 27 96.30 1257 reject_low 32 ALIGNMENT 0 YS2-10e23.q1k chr12 561 880 1067520 1067519 F 320 0.00 1231 reject_low 10 ALIGNMENT 849 YS2-10e23.p1k chr12 33 895 8560 9422 F 863 99.54 1257 reject_low 19 ALIGNMENT 0 YS2-10e23.q1k chr09 557 558 4006 4470 C 0 0.00 1231 ambiguous_tel 1 ALIGNMENT 542 YS2-10e23.q1k chr12 557 1213 1067982 1068649 F 657 94.67 1231|2,0 reject_low 6 ALIGNMENT 0 YS2-10e23.q1k chr06 281 62 3047 3046 C 220 0.00 1231 reject_low 16 ALIGNMENT 545 YS2-10e23.q1k chr07 557 1213 1087350 1088017 F 657 94.82 1231|2,0 reject_low 15 ALIGNMENT 0 YS2-10e23.p1k chr14 62 839 4080 4079 F 778 0.00 1257 reject_low 27 ALIGNMENT 0 YS2-10e23.q1k chr13 504 484 3764 3753 C 21 0.00 1231 reject_low 21 ALIGNMENT 0 YS2-10e23.q1k chr15 561 880 1087147 1087146 F 320 0.00 1231 reject_low 5 ALIGNMENT 0 YS2-10e23.q1k chr06 504 484 2925 2914 C 21 0.00 1231 reject_low 16 ALIGNMENT 0 YS2-10e23.q1k chr16 558 559 3526 3990 C 0 0.00 1231 ambiguous_tel 3 ALIGNMENT 391 YS2-10e23.q1k chr05 560 165 4163 4558 C 396 99.75 1231|2,0 reject_low 9 ALIGNMENT 485 YS2-10e23.q1k chr14 560 40 4080 4600 C 521 97.89 1231|2,0 ambiguous_tel 2 ALIGNMENT 849 YS2-10e23.p1k chr12 33 895 3025 3887 F 863 99.54 1257 reject_low 18 ALIGNMENT 235 YS2-10e23.p1k chr10 843 1213 4454 4817 F 371 89.49 1257 reject_low 26 ALIGNMENT 0 YS2-10e23.q1k chr15 559 558 1087146 1087610 F 0 0.00 1231 reject_low 13 ALIGNMENT 24 YS2-10e23.q1k chr16 401 430 944241 944270 F 30 93.33 1231 reject_low 23,30 ALIGNMENT 785 YS2-10e23.p1k chr05 33 843 2872 3682 F 811 99.01 1257 reject_low 9 ALIGNMENT 511 YS2-10e23.q1k chr10 557 40 4454 4972 C 518 99.81 1231 ambiguous_tel 0 ALIGNMENT 791 YS2-10e23.p1k chr16 33 843 2717 3527 F 811 99.26 1257 ambiguous_tel 3 ALIGNMENT 0 YS2-10e23.q1k chr13 450 431 3787 3782 C 20 0.00 1231 reject_low 21 ALIGNMENT 0 YS2-10e23.q1k chr12 559 558 1074182 1074646 F 0 0.00 1231 reject_low 12 ALIGNMENT 0 YS2-10e23.p1k chr16 62 839 3989 3988 F 778 0.00 1257 reject_low 28 ALIGNMENT 0 YS2-10e23.q1k chr12 504 484 3888 3877 C 21 0.00 1231 reject_low 18 ALIGNMENT 24 YS2-10e23.q1k chr08 430 401 3639 3668 C 30 93.33 1231 reject_low 20 ALIGNMENT 485 YS2-10e23.q1k chr07 40 560 1086368 1086888 F 521 97.89 1231|0,2 reject_low 8,15 ALIGNMENT 785 YS2-10e23.p1k chr09 33 843 3196 4006 F 811 99.01 1257 ambiguous_tel 1 ALIGNMENT 24 YS2-10e23.q1k chr13 430 401 3783 3812 C 30 93.33 1231 reject_low 21 ALIGNMENT 0 YS2-10e23.q1k chr08 62 281 558621 558620 F 220 0.00 1231 reject_low 22,29 ALIGNMENT 0 YS2-10e23.q1k chr05 558 559 3681 4164 C 0 0.00 1231 reject_low 9 ALIGNMENT 29 YS2-10e23.q1k chr08 451 483 558720 558752 F 33 96.97 1231 reject_low 22,29 ALIGNMENT 606 YS2-10e23.q1k chr08 505 1213 558743 559462 F 709 95.63 1231 reject_low 29 ALIGNMENT 0 YS2-10e23.q1k chr02 400 339 4138 4153 C 62 0.00 1231 reject_low 17 ALIGNMENT 0 YS2-10e23.q1k chr13 400 339 3813 3828 C 62 0.00 1231 reject_low 21 ALIGNMENT 24 YS2-10e23.p1k chr13 923 949 3760 3786 F 27 96.30 1257 reject_low 37 ALIGNMENT 511 YS2-10e23.q1k chr09 557 40 4471 4989 C 518 99.81 1231 ambiguous_tel 1 ALIGNMENT 29 YS2-10e23.q1k chr12 115 149 1067094 1067128 F 35 94.29 1231 reject_low 6,10 ALIGNMENT 485 YS2-10e23.q1k chr16 560 40 3989 4509 C 521 97.89 1231|2,0 ambiguous_tel 3 ALIGNMENT 548 YS2-10e23.q1k chr12 557 1213 1074645 1075312 F 657 94.98 1231|2,0 reject_low 12 ALIGNMENT 30 YS2-10e24.q1k vc_7 1077 1113 13525 13562 F 37 94.59 1254 reject_low 12 ALIGNMENT 0 YS2-10e24.q1k vc_5 1075 62 5064 5063 C 1014 0.00 1254 reject_low 11 ALIGNMENT 39 YS2-10e24.q1k vc_4 1113 1229 6353 6479 F 117 80.34 1254|1,0 reject_low 8 ALIGNMENT 33 YS2-10e24.q1k vc_3 1113 1074 2472 2512 C 40 95.00 1254 reject_low 10 ALIGNMENT 0 YS2-10e24.q1k vc_3 1073 62 2513 2512 C 1012 0.00 1254 reject_low 10 ALIGNMENT 0 YS2-10e24.q1k vc_1 1073 62 2513 2512 C 1012 0.00 1254 reject_low 9 ALIGNMENT 39 YS2-10e24.q1k vc_4 1229 1113 5686 5812 C 117 80.34 1254 reject_low 5 ALIGNMENT 39 YS2-10e24.q1k vc_4 1113 1229 126 252 F 117 80.34 1254 reject_low 4 ALIGNMENT 0 YS2-10e24.q1k vc_5 62 1112 2398 2397 F 1051 0.00 1254 reject_low 6 ALIGNMENT 0 YS2-10e24.q1k vc_5 1075 62 37 36 C 1014 0.00 1254 reject_low 13 ALIGNMENT 945 YS2-10e24.p1k chr08 1052 34 309331 310350 C 1019 98.53 1232 accept_chi 1 ALIGNMENT 0 YS2-10e24.q1k vc_7 62 1076 13525 13524 F 1015 0.00 1254 reject_low 12 ALIGNMENT 37 YS2-10e24.q1k vc_4 1189 1113 1452 1534 C 77 84.42 1254 reject_low 7 ALIGNMENT 39 YS2-10e24.q1k vc_1 1113 1229 2531 2657 F 117 80.34 1254 reject_low 2 ALIGNMENT 39 YS2-10e24.q1k vc_5 1113 1229 2398 2524 F 117 80.34 1254 reject_low 6 ALIGNMENT 0 YS2-10e24.q1k vc_3 62 1112 2531 2530 F 1051 0.00 1254 reject_low 3 ALIGNMENT 39 YS2-10e24.q1k vc_3 1113 1229 2531 2657 F 117 80.34 1254 reject_low 3 ALIGNMENT 0 YS2-10e24.q1k vc_4 1112 62 5813 5812 C 1051 0.00 1254 reject_low 5 ALIGNMENT 958 YS2-10e24.q1k chr08 51 1073 309331 310355 F 1023 98.53 1254 accept_chi 0 ALIGNMENT 33 YS2-10e24.q1k vc_1 1113 1074 2472 2512 C 40 95.00 1254 reject_low 9 ALIGNMENT 33 YS2-10e24.q1k vc_4 1074 1113 5831 5871 F 40 95.00 1254 reject_low 8 ALIGNMENT 0 YS2-10e24.q1k vc_1 62 1112 2531 2530 F 1051 0.00 1254 reject_low 2 ALIGNMENT 0 YS2-10e24.q1k vc_4 62 1112 126 125 F 1051 0.00 1254 reject_low 4 ALIGNMENT 31 YS2-10e24.q1k vc_5 1113 1076 5025 5063 C 38 94.74 1254 reject_low 11 ALIGNMENT 0 YS2-10e24.q1k vc_4 62 1073 5831 5830 F 1012 0.00 1254 reject_low 8 ALIGNMENT 0 YS2-10e24.q1k vc_4 1114 1113 5872 6353 F 0 0.00 1254 reject_low 8 ALIGNMENT 28 YS2-10e24.q1k vc_5 1110 1076 1 36 C 35 94.29 1254 reject_low 13 ALIGNMENT 0 YS2-10e24.q1k vc_4 1112 62 1535 1534 C 1051 0.00 1254 reject_low 7 ALIGNMENT 1061 YS2-10f02.p1k chr13 1279 32 886752 888003 C 1248 95.59 1286 accept 0 ALIGNMENT 768 YS2-10f03.q1k chr15 34 886 525252 526102 F 853 97.42 1327 accept 0 ALIGNMENT 1022 YS2-10f03.p1k chr15 1176 34 528029 529181 C 1143 96.24 1314 accept 0 ALIGNMENT 235 YS2-10f04.p1k chr12 31 276 826261 826507 F 246 99.59 294 accept_chi 0 ALIGNMENT 235 YS2-10f04.q1k chr12 270 29 826261 826502 C 242 100.00 271 accept_chi 1 ALIGNMENT 0 YS2-10f04.p1k chr12 277 294 826507 826506 F 18 0.00 294 accept_chi 0 ALIGNMENT 952 YS2-10f05.p1k chr03 31 1153 110827 111963 F 1123 96.26 1289 accept 0 ALIGNMENT 973 YS2-10f06.p1k chr13 30 1169 118357 119515 F 1140 96.40 1285 accept 0 ALIGNMENT 0 YS2-10f07.p1k chr10 922 522 416457 416456 C 401 0.00 1337 reject_low 16 ALIGNMENT 47 YS2-10f07.p1k chr14 33 80 519116 519163 F 48 100.00 1337 reject_low 15 ALIGNMENT 60 YS2-10f07.p1k chr10 92 33 204648 204707 C 60 100.00 1337 reject_low 2 ALIGNMENT 55 YS2-10f07.p1k chr11 33 88 512990 513045 F 56 100.00 1337 reject_low 17 ALIGNMENT 55 YS2-10f07.p1k chr09 33 88 324317 324372 F 56 100.00 1337 reject_low 11 ALIGNMENT 55 YS2-10f07.p1k chr13 88 33 463553 463608 C 56 100.00 1337 reject_low 14 ALIGNMENT 0 YS2-10f07.p1k chr10 922 93 541419 541418 C 830 0.00 1337 reject_low 3 ALIGNMENT 0 YS2-10f07.p1k chr02 922 89 405955 405954 C 834 0.00 1337 reject_low 7 ALIGNMENT 0 YS2-10f07.p1k chr10 922 93 204649 204648 C 830 0.00 1337 reject_low 2 ALIGNMENT 0 YS2-10f07.p1k chr10 922 89 355373 355372 C 834 0.00 1337 reject_low 12 ALIGNMENT 55 YS2-10f07.p1k chr07 88 33 531614 531669 C 56 100.00 1337 reject_low 9 ALIGNMENT 0 YS2-10f07.p1k chr10 476 62 416500 416499 C 415 0.00 1337 reject_low 16 ALIGNMENT 0 YS2-10f07.p1k chr07 922 89 531615 531614 C 834 0.00 1337 reject_low 9 ALIGNMENT 0 YS2-10f07.p1k chr07 89 922 544652 544651 F 834 0.00 1337 reject_low 10 ALIGNMENT 55 YS2-10f07.p1k chr02 88 33 405954 406009 C 56 100.00 1337 reject_low 7 ALIGNMENT 55 YS2-10f07.p1k chr04 88 33 568961 569016 C 56 100.00 1337 reject_low 8 ALIGNMENT 23 YS2-10f07.p1k chr10 521 477 416456 416499 C 45 86.67 1337 reject_low 16 ALIGNMENT 55 YS2-10f07.p1k chr07 33 88 544597 544652 F 56 100.00 1337 reject_low 10 ALIGNMENT 0 YS2-10f07.p1k chr13 922 89 463554 463553 C 834 0.00 1337 reject_low 14 ALIGNMENT 0 YS2-10f07.p1k chr04 62 238 434420 434419 F 177 0.00 1337 reject_low 1 ALIGNMENT 0 YS2-10f07.p1k chr12 922 91 793917 793916 C 832 0.00 1337 reject_low 5 ALIGNMENT 55 YS2-10f07.p1k chr10 33 88 374356 374411 F 56 100.00 1337 reject_low 13 ALIGNMENT 24 YS2-10f07.p1k chr11 394 523 513338 513467 F 130 77.69 1337 reject_low 17 ALIGNMENT 0 YS2-10f07.p1k chr14 81 922 519163 519162 F 842 0.00 1337 reject_low 15 ALIGNMENT 59 YS2-10f07.p1k chr09 33 91 336362 336420 F 59 100.00 1337 reject_low 4 ALIGNMENT 0 YS2-10f07.p1k chr12 922 90 427133 427132 C 833 0.00 1337 reject_low 6 ALIGNMENT 0 YS2-10f07.p1k chr04 922 89 568962 568961 C 834 0.00 1337 reject_low 8 ALIGNMENT 0 YS2-10f07.p1k chr11 524 922 513467 513466 F 399 0.00 1337 reject_low 17 ALIGNMENT 55 YS2-10f07.p1k chr10 88 33 355372 355427 C 56 100.00 1337 reject_low 12 ALIGNMENT 0 YS2-10f07.p1k chr09 92 922 336420 336419 F 831 0.00 1337 reject_low 4 ALIGNMENT 1017 YS2-10f07.p1k chr15 1203 33 570827 572013 C 1171 96.93 1337 accept 0 ALIGNMENT 56 YS2-10f07.p1k chr12 89 33 427132 427188 C 57 100.00 1337 reject_low 6 ALIGNMENT 40 YS2-10f07.p1k chr04 239 499 434420 434690 F 261 75.10 1337 reject_low 1 ALIGNMENT 60 YS2-10f07.p1k chr10 92 33 541418 541477 C 60 100.00 1337 reject_low 3 ALIGNMENT 0 YS2-10f07.p1k chr04 500 922 434690 434689 F 423 0.00 1337 reject_low 1 ALIGNMENT 0 YS2-10f07.p1k chr09 89 922 324372 324371 F 834 0.00 1337 reject_low 11 ALIGNMENT 704 YS2-10f07.q1k chr15 30 816 567617 568406 F 787 97.59 1285 accept 0 ALIGNMENT 0 YS2-10f07.p1k chr10 89 922 374411 374410 F 834 0.00 1337 reject_low 13 ALIGNMENT 0 YS2-10f07.p1k chr11 89 393 513046 513337 F 305 0.00 1337 reject_low 17 ALIGNMENT 57 YS2-10f07.p1k chr12 90 33 793916 793973 C 58 100.00 1337 reject_low 5 ALIGNMENT 258 YS2-10f08.p1k chr10 1126 718 74201 74610 C 409 87.78 1341 reject_low 1 ALIGNMENT 1018 YS2-10f08.p1k chr03 30 1189 176807 177972 F 1160 96.90 1341 accept 0 ALIGNMENT 0 YS2-10f08.p1k chr10 717 62 74611 74610 C 656 0.00 1341 reject_low 1 ALIGNMENT 924 YS2-10f08.q1k chr03 1109 39 179440 180521 C 1071 96.92 1381 accept 0 ALIGNMENT 0 YS2-10f09.p1k chr16 886 847 795390 795389 C 40 0.00 1344 reject_low 1 ALIGNMENT 337 YS2-10f09.p1k chr16 846 469 795389 795766 C 378 96.83 1344 reject_low 1 ALIGNMENT 0 YS2-10f09.q1k chr16 62 168 794957 794956 F 107 0.00 1386 reject_low 1 ALIGNMENT 0 YS2-10f09.q1k chr16 244 595 795031 795030 F 352 0.00 1386 reject_low 1 ALIGNMENT 0 YS2-10f09.p1k chr16 468 62 795767 795766 C 407 0.00 1344 reject_low 1 ALIGNMENT 985 YS2-10f09.p1k chr07 1129 31 727067 728176 C 1099 98.09 1344 accept 0 ALIGNMENT 555 YS2-10f09.q1k chr07 36 681 726840 727493 F 646 96.59 1386 accept 0 ALIGNMENT 63 YS2-10f09.q1k chr16 169 243 794957 795031 F 75 96.00 1386 reject_low 1 ALIGNMENT 949 YS2-10f10.p1k chr04 1144 28 27537 28666 C 1117 96.42 1334 accept 0 ALIGNMENT 864 YS2-10f12.q1k chr11 1031 37 406658 407665 C 995 97.09 1365 accept 0 ALIGNMENT 1018 YS2-10f12.p1k chr11 32 1261 403689 404937 F 1230 95.61 1339 accept 0 ALIGNMENT 1014 YS2-10f13.p1k chr02 1205 32 480992 482178 C 1174 96.51 1338 accept 0 ALIGNMENT 0 YS2-10f13.q1k chr16 62 187 700592 700591 F 126 0.00 1301 reject_low 1 ALIGNMENT 732 YS2-10f13.q1k chr16 188 991 700592 701408 F 804 97.76 1301 reject_low 1 ALIGNMENT 875 YS2-10f13.q1k chr02 31 991 477507 478481 F 961 97.92 1301 accept 0 ALIGNMENT 917 YS2-10f16.p1k chr07 32 1062 253762 254805 F 1031 97.28 1296 accept 0 ALIGNMENT 924 YS2-10f16.q1k chr07 1129 39 257004 258110 C 1091 96.70 1378 accept 0 ALIGNMENT 0 YS2-10f17.q1k chr15 399 439 247607 247606 F 41 0.00 439 accept 0 ALIGNMENT 121 YS2-10f17.q1k chr13 40 170 133880 134010 F 131 98.47 439 reject_low 8 ALIGNMENT 0 YS2-10f17.q1k vc_4 62 398 5831 5830 F 337 0.00 439 reject_low 11 ALIGNMENT 0 YS2-10f17.q1k chr13 171 439 134010 134009 F 269 0.00 439 reject_low 8 ALIGNMENT 41 YS2-10f17.q1k vc_4 399 439 5831 5871 F 41 100.00 439 reject_low 11 ALIGNMENT 322 YS2-10f17.p1k vc_5 474 1 4194 4669 C 474 90.30 569 reject_vc 4 ALIGNMENT 0 YS2-10f17.q1k chr15 62 166 247376 247375 F 105 0.00 439 accept 0 ALIGNMENT 41 YS2-10f17.q1k vc_1 439 399 2472 2512 C 41 100.00 439 reject_low 9 ALIGNMENT 0 YS2-10f17.q1k vc_5 400 62 5064 5063 C 339 0.00 439 reject_low 12 ALIGNMENT 38 YS2-10f17.q1k vc_7 402 439 13525 13562 F 38 100.00 439 reject_low 13 ALIGNMENT 322 YS2-10f17.p1k vc_6 1 474 3712 4187 F 474 90.30 569 reject_vc 5 ALIGNMENT 224 YS2-10f17.q1k chr15 167 398 247376 247607 F 232 100.00 439 accept 0 ALIGNMENT 316 YS2-10f17.p1k vc_7 1 474 13918 14393 F 474 89.87 569 reject_vc 7 ALIGNMENT 39 YS2-10f17.q1k vc_5 439 401 5025 5063 C 39 100.00 439 reject_low 12 ALIGNMENT 41 YS2-10f17.q1k vc_3 439 399 2472 2512 C 41 100.00 439 reject_low 10 ALIGNMENT 322 YS2-10f17.p1k vc_2 474 1 1274 1749 C 474 90.30 569 reject_vc 2 ALIGNMENT 0 YS2-10f17.q1k vc_7 62 401 13525 13524 F 340 0.00 439 reject_low 13 ALIGNMENT 316 YS2-10f17.p1k vc_7 1 474 456 931 F 474 89.87 569 reject_vc 6 ALIGNMENT 322 YS2-10f17.p1k vc_1 474 1 1274 1749 C 474 90.30 569 reject_vc 1 ALIGNMENT 36 YS2-10f17.q1k vc_5 436 401 1 36 C 36 100.00 439 reject_low 14 ALIGNMENT 0 YS2-10f17.q1k vc_1 398 62 2513 2512 C 337 0.00 439 reject_low 9 ALIGNMENT 0 YS2-10f17.q1k vc_3 398 62 2513 2512 C 337 0.00 439 reject_low 10 ALIGNMENT 0 YS2-10f17.q1k vc_5 400 62 37 36 C 339 0.00 439 reject_low 14 ALIGNMENT 322 YS2-10f17.p1k vc_3 474 1 1274 1749 C 474 90.30 569 reject_vc 3 ALIGNMENT 65 YS2-10f18.q1k vc_4 305 239 46 112 C 67 100.00 1057 reject_low 8 ALIGNMENT 499 YS2-10f18.q1k vc_7 719 2 1858 2569 C 718 90.95 1057 reject_vc 1 ALIGNMENT 0 YS2-10f18.q1k vc_4 62 238 1548 1547 F 177 0.00 1057 reject_low 3 ALIGNMENT 51 YS2-10f18.q1k vc_7 55 4 6360 6411 C 52 100.00 1057|1,0 reject_low 7 ALIGNMENT 198 YS2-10f18.q1k vc_4 311 664 1881 2232 F 354 86.72 1057 reject_low 3 ALIGNMENT 292 YS2-10f18.q1k vc_2 2 304 2322 2624 F 303 99.01 1057 reject_low 5 ALIGNMENT 292 YS2-10f18.q1k vc_1 2 304 2689 2991 F 303 99.01 1057 reject_low 4 ALIGNMENT 0 YS2-10f18.q1k vc_7 54 55 5172 6360 C 0 0.00 1057 reject_low 7 ALIGNMENT 65 YS2-10f18.q1k vc_4 305 239 6273 6339 C 67 100.00 1057 reject_low 9 ALIGNMENT 0 YS2-10f18.q1k vc_4 238 62 113 112 C 177 0.00 1057 reject_low 8 ALIGNMENT 375 YS2-10f18.q1k vc_4 421 2 5233 5654 C 420 96.67 1057 reject_low 2 ALIGNMENT 0 YS2-10f18.q1k vc_4 306 310 1615 1880 F 5 0.00 1057 reject_low 3 ALIGNMENT 292 YS2-10f18.q1k vc_3 2 304 2689 2991 F 303 99.01 1057 reject_low 6 ALIGNMENT 0 YS2-10f18.q1k vc_7 305 305 4700 4921 C 1 0.00 1057 reject_low 7 ALIGNMENT 65 YS2-10f18.q1k vc_4 239 305 1548 1614 F 67 100.00 1057 reject_low 3 ALIGNMENT 87 YS2-10f18.q1k vc_7 421 306 4584 4699 C 116 92.24 1057 reject_low 7 ALIGNMENT 0 YS2-10f18.q1k vc_4 238 62 6340 6339 C 177 0.00 1057 reject_low 9 ALIGNMENT 499 YS2-10f18.q1k vc_5 2 719 2556 3267 F 718 90.81 1057 reject_vc 0 ALIGNMENT 238 YS2-10f18.q1k vc_7 304 54 4922 5172 C 251 98.41 1057|0,1 reject_low 7 ALIGNMENT 519 YS2-10f19.p1k vc_2 759 1 991 1749 C 759 90.91 767 reject_vc 2 ALIGNMENT 513 YS2-10f19.p1k vc_7 1 722 13918 14636 F 722 91.27 767 reject_vc 5 ALIGNMENT 519 YS2-10f19.p1k vc_1 759 1 991 1749 C 759 90.91 767 reject_vc 1 ALIGNMENT 519 YS2-10f19.p1k vc_3 759 1 991 1749 C 759 90.91 767 reject_vc 3 ALIGNMENT 522 YS2-10f19.p1k vc_5 759 1 3911 4669 C 759 91.04 767 reject_vc 0 ALIGNMENT 514 YS2-10f19.p1k vc_7 1 759 456 1214 F 759 90.25 767 reject_vc 4 ALIGNMENT 513 YS2-10f19.p1k vc_6 1 643 3712 4353 F 643 94.25 767 reject_vc 6 ALIGNMENT 994 YS2-10f20.q1k chr02 30 1207 720413 721605 F 1178 96.60 1302 accept 0 ALIGNMENT 1018 YS2-10f20.p1k chr02 1258 30 724144 725378 C 1229 95.12 1312 accept 0 ALIGNMENT 1068 YS2-10f21.p1k chr04 1288 35 1047659 1048923 C 1254 95.85 1302 accept 0 ALIGNMENT 915 YS2-10f21.q1k chr04 31 1134 1044446 1045553 F 1104 95.29 1339 accept 0 ALIGNMENT 0 YS2-10f22.p1k chr12 62 209 482044 482043 F 148 0.00 743 reject_low 3 ALIGNMENT 0 YS2-10f22.p1k chr12 329 743 472582 472581 F 415 0.00 743 reject_low 4 ALIGNMENT 0 YS2-10f22.p1k chr12 344 743 489481 489480 F 400 0.00 743 reject_low 5 ALIGNMENT 0 YS2-10f22.q1k chr12 453 62 482163 482162 C 392 0.00 749 reject_low 4 ALIGNMENT 291 YS2-10f22.p1k chr12 34 328 468636 468930 F 295 100.00 743 reject_low 2 ALIGNMENT 291 YS2-10f22.q1k chr12 748 454 468636 468930 C 295 100.00 749 accept 0 ALIGNMENT 0 YS2-10f22.q1k chr12 453 62 472583 472582 C 392 0.00 749 reject_low 2 ALIGNMENT 0 YS2-10f22.p1k chr12 62 209 485696 485695 F 148 0.00 743 reject_low 6 ALIGNMENT 0 YS2-10f22.q1k chr12 453 62 485815 485814 C 392 0.00 749 reject_low 7 ALIGNMENT 0 YS2-10f22.q1k chr12 749 573 485697 485696 C 177 0.00 749 reject_low 7 ALIGNMENT 0 YS2-10f22.q1k chr12 749 573 489349 489348 C 177 0.00 749 reject_low 3 ALIGNMENT 119 YS2-10f22.p1k chr12 210 328 482044 482162 F 119 100.00 743 reject_low 3 ALIGNMENT 0 YS2-10f22.q1k chr12 749 573 472465 472464 C 177 0.00 749 reject_low 2 ALIGNMENT 668 YS2-10f22.p1k chr12 34 743 459499 460211 F 710 99.44 743 accept 0 ALIGNMENT 119 YS2-10f22.q1k chr12 572 454 472464 472582 C 119 100.00 749 reject_low 2 ALIGNMENT 0 YS2-10f22.p1k chr12 62 209 472464 472463 F 148 0.00 743 reject_low 4 ALIGNMENT 0 YS2-10f22.q1k chr12 749 573 482045 482044 C 177 0.00 749 reject_low 4 ALIGNMENT 671 YS2-10f22.q1k chr12 748 39 459499 460211 C 710 99.58 749 reject_low 1 ALIGNMENT 119 YS2-10f22.q1k chr12 572 454 482044 482162 C 119 100.00 749 reject_low 4 ALIGNMENT 0 YS2-10f22.q1k chr12 438 62 489482 489481 C 377 0.00 749 reject_low 3 ALIGNMENT 0 YS2-10f22.q1k chr12 453 62 468931 468930 C 392 0.00 749 accept 0 ALIGNMENT 128 YS2-10f22.p1k chr12 210 343 489348 489481 F 134 98.51 743 reject_low 5 ALIGNMENT 119 YS2-10f22.p1k chr12 210 328 485696 485814 F 119 100.00 743 reject_low 6 ALIGNMENT 0 YS2-10f22.p1k chr12 329 743 485814 485813 F 415 0.00 743 reject_low 6 ALIGNMENT 0 YS2-10f22.p1k chr12 329 743 482162 482161 F 415 0.00 743 reject_low 3 ALIGNMENT 128 YS2-10f22.q1k chr12 572 439 489348 489481 C 134 98.51 749 reject_low 3 ALIGNMENT 119 YS2-10f22.p1k chr12 210 328 472464 472582 F 119 100.00 743 reject_low 4 ALIGNMENT 0 YS2-10f22.p1k chr12 62 209 489348 489347 F 148 0.00 743 reject_low 5 ALIGNMENT 119 YS2-10f22.q1k chr12 572 454 485696 485814 C 119 100.00 749 reject_low 7 ALIGNMENT 0 YS2-10f22.p1k chr12 329 743 468930 468929 F 415 0.00 743 reject_low 2 ALIGNMENT 449 YS2-10f23.q1k chr07 923 83 726797 727618 C 841 86.56 1245 accept 0 ALIGNMENT 511 YS2-10f23.p1k chr07 33 1062 723703 724731 F 1030 84.27 1261 accept 0 ALIGNMENT 141 YS2-10f23.q1k chr16 349 83 795391 795646 C 267 86.89 1245 reject_low 1 ALIGNMENT 810 YS2-10f24.p1k chr03 18 1051 232088 233141 F 1034 94.10 1113 accept 0 ALIGNMENT 673 YS2-10f24.q1k chr03 849 100 234924 235673 C 750 97.87 1120 accept 0 ALIGNMENT 1017 YS2-10g01.q1k chr07 1198 40 914175 915347 C 1159 96.64 1265 accept 0 ALIGNMENT 928 YS2-10g01.p1k chr07 35 1146 910074 911210 F 1112 95.95 1281 accept 0 ALIGNMENT 966 YS2-10g02.q1k chr11 1178 40 151047 152197 C 1139 96.49 1272 accept 0 ALIGNMENT 952 YS2-10g02.p1k chr11 36 1214 146623 147812 F 1179 94.83 1298 accept 0 ALIGNMENT 1008 YS2-10g03.p1k chr12 34 1162 727786 728919 F 1129 96.19 1316 accept 0 ALIGNMENT 931 YS2-10g03.q1k chr12 1056 40 728832 729863 C 1017 97.94 1277 accept 0 ALIGNMENT 1022 YS2-10g04.q1k chr09 1203 37 377409 378591 C 1167 96.66 1328 accept 0 ALIGNMENT 1004 YS2-10g04.p1k chr09 34 1196 373570 374740 F 1163 96.04 1296 accept 0 ALIGNMENT 804 YS2-10g05.p1k chr10 199 1153 438677 439642 F 955 96.02 1388 accept 0 ALIGNMENT 990 YS2-10g05.q1k chr10 1191 41 443820 444984 C 1151 96.35 1320 accept 0 ALIGNMENT 125 YS2-10g06.p1k chr09 993 1189 138835 139038 F 197 89.34 1342|3,0 reject_bad_break 0 ALIGNMENT 0 YS2-10g06.p1k chr09 996 995 138226 138837 F 0 0.00 1342 reject_bad_break 0 ALIGNMENT 947 YS2-10g06.q1k chr09 1119 43 141213 142297 C 1077 96.66 1328 reject_bad_break 0 ALIGNMENT 826 YS2-10g06.p1k chr09 30 998 137259 138228 F 969 96.59 1342|0,3 reject_bad_break 0 ALIGNMENT 413 YS2-10g07.p1k chr12 839 191 650825 651475 C 649 89.06 1359 reject_low 18 ALIGNMENT 0 YS2-10g07.q1k chr16 62 826 606365 606364 F 765 0.00 1385 reject_low 22 ALIGNMENT 309 YS2-10g07.p1k chr04 838 506 1352634 1352966 C 333 99.70 1359 reject_low 21 ALIGNMENT 0 YS2-10g07.p1k chr07 839 904 574704 574703 F 66 0.00 1359 reject_low 12 ALIGNMENT 0 YS2-10g07.p1k chr03 529 62 149785 149784 C 468 0.00 1359 reject_low 26 ALIGNMENT 0 YS2-10g07.p1k chr04 62 522 871760 871759 F 461 0.00 1359 reject_low 32 ALIGNMENT 0 YS2-10g07.p1k chr04 702 62 992737 992736 C 641 0.00 1359 reject_low 30 ALIGNMENT 0 YS2-10g07.p1k chr03 529 62 84716 84715 C 468 0.00 1359 reject_low 28 ALIGNMENT 0 YS2-10g07.p1k chr12 904 840 650826 650825 C 65 0.00 1359 reject_low 18 ALIGNMENT 0 YS2-10g07.p1k chr01 839 904 166163 166162 F 66 0.00 1359 reject_low 19 ALIGNMENT 0 YS2-10g07.p1k chr03 904 839 84811 84810 C 66 0.00 1359 reject_low 8 ALIGNMENT 0 YS2-10g07.p1k chr01 62 516 160249 160248 F 455 0.00 1359 reject_low 23 ALIGNMENT 59 YS2-10g07.p1k chr03 563 838 142803 143077 F 276 77.17 1359 reject_low 27 ALIGNMENT 21 YS2-10g07.q1k chr16 827 862 606365 606400 F 36 97.22 1385 reject_low 22 ALIGNMENT 207 YS2-10g07.p1k chr01 517 838 160249 160575 F 322 90.68 1359 reject_low 23 ALIGNMENT 0 YS2-10g07.p1k chr03 904 806 149514 149513 C 99 0.00 1359 reject_low 26 ALIGNMENT 0 YS2-10g07.p1k chr04 851 904 992647 992646 F 54 0.00 1359 reject_low 15 ALIGNMENT 0 YS2-10g07.p1k chr04 679 62 1353080 1353079 C 618 0.00 1359 reject_low 31 ALIGNMENT 0 YS2-10g07.p1k chr04 904 799 1352963 1352962 C 106 0.00 1359 reject_low 31 ALIGNMENT 42 YS2-10g07.p1k chr06 771 579 137718 137899 C 193 78.76 1359 reject_low 29 ALIGNMENT 716 YS2-10g07.p1k chr15 29 847 709213 710033 F 819 96.83 1359 reject_low 11 ALIGNMENT 0 YS2-10g07.p1k chr04 62 190 991987 991986 F 129 0.00 1359 reject_low 15 ALIGNMENT 758 YS2-10g07.p1k chr04 842 29 871812 872626 C 814 98.65 1359 reject_low 3 ALIGNMENT 0 YS2-10g07.p1k chr04 573 904 871810 871809 F 332 0.00 1359 reject_low 32 ALIGNMENT 0 YS2-10g07.p1k chr03 848 62 168596 168595 C 787 0.00 1359 reject_low 1 ALIGNMENT 752 YS2-10g07.p1k chr02 845 29 29634 30451 C 817 98.29 1359 reject_low 4 ALIGNMENT 0 YS2-10g07.p1k chr04 904 788 992652 992651 C 117 0.00 1359 reject_low 30 ALIGNMENT 748 YS2-10g07.p1k chr03 838 29 84810 85620 C 810 98.40 1359 reject_low 8 ALIGNMENT 0 YS2-10g07.p1k chr04 62 190 650765 650764 F 129 0.00 1359 accept 0 ALIGNMENT 0 YS2-10g07.p1k chr06 904 839 137909 137908 C 66 0.00 1359 reject_low 7 ALIGNMENT 0 YS2-10g07.p1k chr03 62 562 142803 142802 F 501 0.00 1359 reject_low 27 ALIGNMENT 0 YS2-10g07.p1k chr03 904 618 84627 84626 C 287 0.00 1359 reject_low 28 ALIGNMENT 42 YS2-10g07.p1k chr03 617 530 84626 84715 C 88 85.23 1359 reject_low 28 ALIGNMENT 0 YS2-10g07.p1k chr03 859 904 168947 168946 F 46 0.00 1359 reject_low 20 ALIGNMENT 0 YS2-10g07.p1k chr07 904 848 811445 811444 C 57 0.00 1359 reject_low 2 ALIGNMENT 0 YS2-10g07.p1k chr04 839 904 884215 884214 F 66 0.00 1359 reject_low 16 ALIGNMENT 162 YS2-10g07.p1k chr03 1054 849 168387 168595 C 206 92.72 1359 reject_low 1 ALIGNMENT 25 YS2-10g07.p1k chr04 523 572 871760 871810 F 50 88.00 1359 reject_low 32 ALIGNMENT 415 YS2-10g07.p1k chr07 191 838 567115 567764 F 648 89.20 1359 reject_low 17 ALIGNMENT 0 YS2-10g07.p1k chr03 62 516 168605 168604 F 455 0.00 1359 reject_low 20 ALIGNMENT 0 YS2-10g07.p1k chr12 839 904 981696 981695 F 66 0.00 1359 reject_low 5 ALIGNMENT 0 YS2-10g07.p1k chr12 190 62 651476 651475 C 129 0.00 1359 reject_low 18 ALIGNMENT 0 YS2-10g07.p1k chr04 904 839 981166 981165 C 66 0.00 1359 reject_low 6 ALIGNMENT 0 YS2-10g07.p1k chr04 904 839 1352635 1352634 C 66 0.00 1359 reject_low 21 ALIGNMENT 0 YS2-10g07.q1k chr16 863 899 606400 606399 F 37 0.00 1385 reject_low 22 ALIGNMENT 0 YS2-10g07.p1k chr04 845 986 651421 651427 F 142 0.00 1359 accept 0 ALIGNMENT 0 YS2-10g07.p1k chr06 904 772 137719 137718 C 133 0.00 1359 reject_low 29 ALIGNMENT 408 YS2-10g07.p1k chr04 191 850 991987 992647 F 660 88.64 1359 reject_low 15 ALIGNMENT 0 YS2-10g07.p1k chr14 840 904 567994 567993 F 65 0.00 1359 reject_low 13 ALIGNMENT 0 YS2-10g07.p1k chr04 62 190 883566 883565 F 129 0.00 1359 reject_low 16 ALIGNMENT 751 YS2-10g07.p1k chr06 838 29 137908 138718 C 810 98.52 1359 reject_low 7 ALIGNMENT 0 YS2-10g07.p1k chr04 839 904 519643 519642 F 66 0.00 1359 reject_low 14 ALIGNMENT 736 YS2-10g07.p1k chr12 838 29 941189 941999 C 810 97.90 1359 reject_low 10 ALIGNMENT 715 YS2-10g07.p1k chr04 29 838 518833 519643 F 810 97.04 1359 reject_low 14 ALIGNMENT 750 YS2-10g07.p1k chr15 838 41 970282 971079 C 798 98.87 1359 reject_low 9 ALIGNMENT 0 YS2-10g07.p1k chr03 904 848 151510 151509 C 57 0.00 1359 reject_low 24 ALIGNMENT 960 YS2-10g07.q1k chr04 1157 39 654058 655172 C 1119 96.16 1385 accept 0 ALIGNMENT 757 YS2-10g07.p1k chr04 838 29 981165 981975 C 810 98.77 1359 reject_low 6 ALIGNMENT 0 YS2-10g07.p1k chr07 839 904 567764 567763 F 66 0.00 1359 reject_low 17 ALIGNMENT 0 YS2-10g07.p1k chr01 62 190 165511 165510 F 129 0.00 1359 reject_low 19 ALIGNMENT 99 YS2-10g07.p1k chr03 847 517 151509 151838 C 331 80.36 1359 reject_low 24 ALIGNMENT 727 YS2-10g07.p1k chr07 29 838 573894 574704 F 810 97.53 1359 reject_low 12 ALIGNMENT 31 YS2-10g07.p1k chr04 787 703 992651 992736 C 85 81.18 1359 reject_low 30 ALIGNMENT 89 YS2-10g07.p1k chr04 987 1128 651428 651570 F 142 86.62 1359 accept 0 ALIGNMENT 27 YS2-10g07.p1k chr04 798 680 1352962 1353079 C 119 78.15 1359 reject_low 31 ALIGNMENT 69 YS2-10g07.p1k chr03 805 530 149513 149784 C 276 78.62 1359 reject_low 26 ALIGNMENT 101 YS2-10g07.p1k chr03 517 839 124141 124463 F 323 80.50 1359 reject_low 25 ALIGNMENT 0 YS2-10g07.p1k chr15 848 904 710033 710032 F 57 0.00 1359 reject_low 11 ALIGNMENT 276 YS2-10g07.p1k chr03 517 858 168605 168947 F 342 96.49 1359 reject_low 20 ALIGNMENT 760 YS2-10g07.p1k chr12 29 838 980886 981696 F 810 98.89 1359 reject_low 5 ALIGNMENT 0 YS2-10g07.p1k chr12 904 839 941190 941189 C 66 0.00 1359 reject_low 10 ALIGNMENT 0 YS2-10g07.p1k chr01 839 904 160575 160574 F 66 0.00 1359 reject_low 23 ALIGNMENT 0 YS2-10g07.p1k chr02 904 846 29635 29634 C 59 0.00 1359 reject_low 4 ALIGNMENT 0 YS2-10g07.p1k chr03 839 904 143077 143076 F 66 0.00 1359 reject_low 27 ALIGNMENT 417 YS2-10g07.p1k chr04 191 844 650765 651420 F 654 89.14 1359 accept 0 ALIGNMENT 0 YS2-10g07.p1k chr03 516 62 151839 151838 C 455 0.00 1359 reject_low 24 ALIGNMENT 752 YS2-10g07.p1k chr07 847 29 811444 812262 C 819 98.29 1359 reject_low 2 ALIGNMENT 0 YS2-10g07.p1k chr07 62 190 567115 567114 F 129 0.00 1359 reject_low 17 ALIGNMENT 0 YS2-10g07.p1k chr04 904 843 871813 871812 C 62 0.00 1359 reject_low 3 ALIGNMENT 0 YS2-10g07.p1k chr04 505 62 1352967 1352966 C 444 0.00 1359 reject_low 21 ALIGNMENT 0 YS2-10g07.p1k chr03 62 516 124141 124140 F 455 0.00 1359 reject_low 25 ALIGNMENT 0 YS2-10g07.p1k chr06 578 62 137900 137899 C 517 0.00 1359 reject_low 29 ALIGNMENT 0 YS2-10g07.p1k chr03 840 904 124463 124462 F 65 0.00 1359 reject_low 25 ALIGNMENT 323 YS2-10g07.p1k chr01 191 838 165511 166163 F 648 85.03 1359 reject_low 19 ALIGNMENT 0 YS2-10g07.p1k chr15 904 839 970283 970282 C 66 0.00 1359 reject_low 9 ALIGNMENT 725 YS2-10g07.p1k chr14 29 839 567182 567994 F 811 97.41 1359 reject_low 13 ALIGNMENT 415 YS2-10g07.p1k chr04 191 838 883566 884215 F 648 89.20 1359 reject_low 16 ALIGNMENT 1033 YS2-10g09.p1k chr12 1220 37 558252 559449 C 1184 96.11 1368 accept 0 ALIGNMENT 875 YS2-10g09.q1k chr12 40 1117 553457 554534 F 1078 93.60 1326 accept 0 ALIGNMENT 1014 YS2-10g10.q1k chr02 38 1224 167893 169093 F 1187 95.70 1364 accept 0 ALIGNMENT 388 YS2-10g10.p1k chr02 637 1190 414180 414734 F 554 90.43 1408 reject_low 1 ALIGNMENT 87 YS2-10g10.q1k chr02 1202 948 414490 414755 C 255 78.04 1364 reject_low 1 ALIGNMENT 1023 YS2-10g10.p1k chr02 1275 35 168733 169970 C 1241 95.17 1408 accept 0 ALIGNMENT 0 YS2-10g10.p1k chr02 62 636 414180 414179 F 575 0.00 1408 reject_low 1 ALIGNMENT 0 YS2-10g10.q1k chr02 947 62 414756 414755 C 886 0.00 1364 reject_low 1 ALIGNMENT 965 YS2-10g11.p1k chr14 1144 38 669178 670296 C 1107 96.21 1307 accept 0 ALIGNMENT 945 YS2-10g11.q1k chr14 30 1081 665750 666818 F 1052 97.53 1309 accept 0 ALIGNMENT 1015 YS2-10g12.q1k chr08 1122 42 499090 500178 C 1081 98.15 1339 accept 0 ALIGNMENT 996 YS2-10g12.p1k chr08 31 1105 497332 498425 F 1075 97.95 1301 accept 0 ALIGNMENT 51 YS2-10g13.q1k vc_7 54 3 6360 6411 C 52 100.00 723|1,0 reject_low 12 ALIGNMENT 247 YS2-10g13.p1k vc_7 1 410 456 881 F 410 89.02 536 reject_vc 1 ALIGNMENT 0 YS2-10g13.q1k vc_7 53 54 5172 6360 C 0 0.00 723 reject_low 12 ALIGNMENT 296 YS2-10g13.q1k vc_1 1 303 2689 2991 F 303 99.34 723 reject_low 8 ALIGNMENT 166 YS2-10g13.q1k vc_4 308 639 1879 2218 F 332 85.24 723 reject_low 11 ALIGNMENT 469 YS2-10g13.q1k vc_7 639 1 1923 2569 C 639 91.86 723 reject_vc 1 ALIGNMENT 253 YS2-10g13.p1k vc_5 410 1 4244 4669 C 410 89.51 536 reject_vc 0 ALIGNMENT 253 YS2-10g13.p1k vc_6 1 410 3712 4137 F 410 89.51 536 reject_low 5 ALIGNMENT 0 YS2-10g13.q1k vc_4 237 62 6340 6339 C 176 0.00 723 reject_low 14 ALIGNMENT 58 YS2-10g13.q1k vc_4 304 238 46 112 C 67 97.01 723 reject_low 13 ALIGNMENT 0 YS2-10g13.q1k vc_4 305 307 1615 1878 F 3 0.00 723 reject_low 11 ALIGNMENT 469 YS2-10g13.q1k vc_5 1 639 2556 3202 F 639 92.02 723 reject_vc 0 ALIGNMENT 0 YS2-10g13.q1k vc_4 62 237 1548 1547 F 176 0.00 723 reject_low 11 ALIGNMENT 253 YS2-10g13.p1k vc_1 410 1 1324 1749 C 410 89.51 536 reject_low 2 ALIGNMENT 0 YS2-10g13.q1k vc_4 237 62 113 112 C 176 0.00 723 reject_low 13 ALIGNMENT 58 YS2-10g13.q1k vc_4 304 238 6273 6339 C 67 97.01 723 reject_low 14 ALIGNMENT 375 YS2-10g13.q1k vc_4 414 1 5239 5654 C 414 97.10 723 reject_low 7 ALIGNMENT 83 YS2-10g13.q1k vc_7 414 305 4590 4699 C 110 92.73 723 reject_low 12 ALIGNMENT 247 YS2-10g13.p1k vc_7 1 410 13918 14343 F 410 89.02 536 reject_low 6 ALIGNMENT 296 YS2-10g13.q1k vc_3 1 303 2689 2991 F 303 99.34 723 reject_low 10 ALIGNMENT 253 YS2-10g13.p1k vc_2 410 1 1324 1749 C 410 89.51 536 reject_low 3 ALIGNMENT 242 YS2-10g13.q1k vc_7 303 53 4922 5172 C 251 98.80 723|0,1 reject_low 12 ALIGNMENT 296 YS2-10g13.q1k vc_2 1 303 2322 2624 F 303 99.34 723 reject_low 9 ALIGNMENT 58 YS2-10g13.q1k vc_4 238 304 1548 1614 F 67 97.01 723 reject_low 11 ALIGNMENT 0 YS2-10g13.q1k vc_7 304 304 4700 4921 C 1 0.00 723 reject_low 12 ALIGNMENT 253 YS2-10g13.p1k vc_3 410 1 1324 1749 C 410 89.51 536 reject_low 4 ALIGNMENT 393 YS2-10g14.p1k vc_2 601 1 1140 1749 C 601 90.18 679 reject_vc 4 ALIGNMENT 41 YS2-10g14.q1k vc_2 365 325 2105 2145 C 41 100.00 365 reject_low 9 ALIGNMENT 0 YS2-10g14.q1k vc_5 326 62 5064 5063 C 265 0.00 365 reject_low 12 ALIGNMENT 0 YS2-10g14.q1k chr04 365 325 1006311 1006310 C 41 0.00 365 accept 0 ALIGNMENT 0 YS2-10g14.q1k vc_2 324 62 2146 2145 C 263 0.00 365 reject_low 9 ALIGNMENT 39 YS2-10g14.q1k vc_5 365 327 5025 5063 C 39 100.00 365 reject_low 12 ALIGNMENT 41 YS2-10g14.q1k vc_1 365 325 2472 2512 C 41 100.00 365 reject_low 8 ALIGNMENT 36 YS2-10g14.q1k vc_5 362 327 1 36 C 36 100.00 365 reject_low 14 ALIGNMENT 0 YS2-10g14.q1k vc_5 326 62 37 36 C 265 0.00 365 reject_low 14 ALIGNMENT 38 YS2-10g14.q1k vc_7 328 365 13525 13562 F 38 100.00 365 reject_low 13 ALIGNMENT 41 YS2-10g14.q1k vc_4 325 365 5831 5871 F 41 100.00 365 reject_low 11 ALIGNMENT 0 YS2-10g14.q1k vc_3 324 62 2513 2512 C 263 0.00 365 reject_low 10 ALIGNMENT 272 YS2-10g14.q1k chr04 324 37 1006310 1006597 C 288 98.96 365 accept 0 ALIGNMENT 396 YS2-10g14.p1k vc_6 1 601 3712 4321 F 601 90.35 679 reject_vc 2 ALIGNMENT 393 YS2-10g14.p1k vc_3 601 1 1140 1749 C 601 90.18 679 reject_vc 5 ALIGNMENT 0 YS2-10g14.q1k vc_4 62 324 5831 5830 F 263 0.00 365 reject_low 11 ALIGNMENT 393 YS2-10g14.p1k vc_1 601 1 1140 1749 C 601 90.18 679 reject_vc 3 ALIGNMENT 387 YS2-10g14.p1k vc_7 1 601 456 1065 F 601 89.85 679 reject_vc 6 ALIGNMENT 0 YS2-10g14.q1k vc_7 62 327 13525 13524 F 266 0.00 365 reject_low 13 ALIGNMENT 396 YS2-10g14.p1k vc_5 601 1 4060 4669 C 601 90.35 679 reject_vc 1 ALIGNMENT 0 YS2-10g14.q1k vc_1 324 62 2513 2512 C 263 0.00 365 reject_low 8 ALIGNMENT 387 YS2-10g14.p1k vc_7 1 601 13918 14527 F 601 89.85 679 reject_vc 7 ALIGNMENT 41 YS2-10g14.q1k vc_3 365 325 2472 2512 C 41 100.00 365 reject_low 10 ALIGNMENT 194 YS2-10g15.p1k chr03 69 278 168386 168595 F 210 99.05 1372|0,3 reject_low 21 ALIGNMENT 0 YS2-10g15.p1k chr12 408 916 374339 374338 F 509 0.00 1372 reject_low 18 ALIGNMENT 317 YS2-10g15.p1k chr04 67 409 668091 668433 F 343 98.83 1372 reject_low 3 ALIGNMENT 0 YS2-10g15.p1k chr14 408 916 726575 726574 F 509 0.00 1372 reject_low 19 ALIGNMENT 329 YS2-10g15.p1k chr05 408 67 434626 434967 C 342 100.00 1372 reject_low 2 ALIGNMENT 0 YS2-10g15.p1k chr04 410 916 668433 668432 F 507 0.00 1372 reject_low 3 ALIGNMENT 310 YS2-10g15.p1k chr11 409 67 202288 202629 C 343 98.25 1372 reject_low 10 ALIGNMENT 0 YS2-10g15.p1k chr09 408 916 205556 205555 F 509 0.00 1372 reject_low 8 ALIGNMENT 741 YS2-10g15.p1k chr16 1304 407 559386 560302 C 898 95.32 1372 reject_bad_break 0 ALIGNMENT 0 YS2-10g15.p1k chr14 62 195 546553 546552 F 134 0.00 1372 reject_low 20 ALIGNMENT 0 YS2-10g15.p1k chr01 408 916 182953 182952 F 509 0.00 1372 reject_low 13 ALIGNMENT 129 YS2-10g15.p1k chr03 273 407 168929 169063 F 135 100.00 1372|3,0 reject_low 21 ALIGNMENT 0 YS2-10g15.p1k chr03 408 916 169063 169062 F 509 0.00 1372 reject_low 21 ALIGNMENT 0 YS2-10g15.p1k chr14 316 916 546674 546673 F 601 0.00 1372 reject_low 20 ALIGNMENT 25 YS2-10g15.p1k chr14 196 315 546553 546674 F 120 75.83 1372 reject_low 20 ALIGNMENT 308 YS2-10g15.p1k chr01 67 407 182614 182953 F 341 98.24 1372 reject_low 13 ALIGNMENT 0 YS2-10g15.p1k chr16 408 916 856881 856880 F 509 0.00 1372 reject_low 17 ALIGNMENT 0 YS2-10g15.p1k chr16 412 916 769661 769660 F 505 0.00 1372 reject_low 1 ALIGNMENT 0 YS2-10g15.p1k chr04 916 408 945950 945949 C 509 0.00 1372 reject_low 4 ALIGNMENT 0 YS2-10g15.p1k chr04 408 916 1023471 1023470 F 509 0.00 1372 reject_low 15 ALIGNMENT 310 YS2-10g15.p1k chr07 407 67 319426 319765 C 341 98.53 1372 reject_low 12 ALIGNMENT 0 YS2-10g15.p1k chr03 276 275 168593 168931 F 0 0.00 1372 reject_low 21 ALIGNMENT 0 YS2-10g15.p1k chr05 916 408 249930 249929 C 509 0.00 1372 reject_low 5 ALIGNMENT 1041 YS2-10g15.q1k chr16 37 1231 556268 557472 F 1195 96.23 1376 reject_bad_break 0 ALIGNMENT 318 YS2-10g15.p1k chr04 407 67 945949 946289 C 341 99.12 1372 reject_low 4 ALIGNMENT 304 YS2-10g15.p1k chr12 67 407 374000 374339 F 341 97.95 1372 reject_low 18 ALIGNMENT 30 YS2-10g15.p1k chr16 67 30 560296 560333 C 38 94.74 1372 reject_bad_break 0 ALIGNMENT 0 YS2-10g15.p1k chr16 62 76 856551 856550 F 15 0.00 1372 reject_low 17 ALIGNMENT 0 YS2-10g15.p1k chr07 408 916 707538 707537 F 509 0.00 1372 reject_low 14 ALIGNMENT 0 YS2-10g15.p1k chr11 916 410 202289 202288 C 507 0.00 1372 reject_low 10 ALIGNMENT 0 YS2-10g15.p1k chr16 406 68 560303 560295 C 339 0.00 1372 reject_bad_break 0 ALIGNMENT 305 YS2-10g15.p1k chr16 77 407 856551 856881 F 331 98.79 1372 reject_low 17 ALIGNMENT 313 YS2-10g15.p1k chr16 62 411 769312 769661 F 350 97.71 1372 reject_low 1 ALIGNMENT 0 YS2-10g15.p1k chr08 916 408 146325 146324 C 509 0.00 1372 reject_low 11 ALIGNMENT 305 YS2-10g15.p1k chr14 67 407 546739 547078 F 341 97.95 1372 reject_low 16 ALIGNMENT 310 YS2-10g15.p1k chr07 66 409 712209 712551 F 344 98.26 1372 reject_low 7 ALIGNMENT 0 YS2-10g15.p1k chr07 410 916 712551 712550 F 507 0.00 1372 reject_low 7 ALIGNMENT 303 YS2-10g15.p1k chr14 67 407 726235 726575 F 341 97.65 1372 reject_low 19 ALIGNMENT 0 YS2-10g15.p1k chr14 408 916 547078 547077 F 509 0.00 1372 reject_low 16 ALIGNMENT 0 YS2-10g15.p1k chr02 408 916 198057 198056 F 509 0.00 1372 reject_low 9 ALIGNMENT 318 YS2-10g15.p1k chr05 407 67 249929 250269 C 341 99.12 1372 reject_low 5 ALIGNMENT 304 YS2-10g15.p1k chr04 66 407 1023130 1023471 F 342 97.66 1372 reject_low 15 ALIGNMENT 309 YS2-10g15.p1k chr09 65 407 205215 205556 F 343 98.25 1372 reject_low 8 ALIGNMENT 312 YS2-10g15.p1k chr08 407 67 146324 146664 C 341 98.53 1372 reject_low 11 ALIGNMENT 0 YS2-10g15.p1k chr07 408 916 736327 736326 F 509 0.00 1372 reject_low 6 ALIGNMENT 308 YS2-10g15.p1k chr07 67 407 707199 707538 F 341 98.24 1372 reject_low 14 ALIGNMENT 0 YS2-10g15.p1k chr07 916 408 319427 319426 C 509 0.00 1372 reject_low 12 ALIGNMENT 318 YS2-10g15.p1k chr07 67 407 735987 736327 F 341 99.12 1372 reject_low 6 ALIGNMENT 315 YS2-10g15.p1k chr02 67 407 197717 198057 F 341 98.83 1372 reject_low 9 ALIGNMENT 0 YS2-10g15.p1k chr05 916 409 434627 434626 C 508 0.00 1372 reject_low 2 ALIGNMENT 921 YS2-10g16.q1k chr14 39 1127 721591 722689 F 1089 96.42 1330 accept 0 ALIGNMENT 1006 YS2-10g16.p1k chr14 1288 36 722899 724160 C 1253 94.57 1382 accept 0 ALIGNMENT 334 YS2-10g18.p1k vc_6 1 526 3712 4220 F 526 90.11 830 reject_vc 1 ALIGNMENT 334 YS2-10g18.p1k vc_5 526 1 4161 4669 C 526 90.11 830 reject_vc 0 ALIGNMENT 330 YS2-10g18.p1k vc_3 526 1 1241 1749 C 526 89.92 830 reject_vc 4 ALIGNMENT 325 YS2-10g18.p1k vc_7 1 526 13918 14426 F 526 89.54 830 reject_vc 6 ALIGNMENT 330 YS2-10g18.p1k vc_2 526 1 1241 1749 C 526 89.92 830 reject_vc 3 ALIGNMENT 325 YS2-10g18.p1k vc_7 1 526 456 964 F 526 89.54 830 reject_vc 5 ALIGNMENT 330 YS2-10g18.p1k vc_1 526 1 1241 1749 C 526 89.92 830 reject_vc 2 ALIGNMENT 40 YS2-10g19.q1k vc_4 266 305 5832 5871 F 40 100.00 305 reject_low 5 ALIGNMENT 211 YS2-10g19.q1k chr13 265 39 709135 709361 C 227 98.24 305 accept_chi 1 ALIGNMENT 40 YS2-10g19.q1k vc_1 305 266 2472 2511 C 40 100.00 305 reject_low 2 ALIGNMENT 40 YS2-10g19.q1k vc_3 305 266 2472 2511 C 40 100.00 305 reject_low 4 ALIGNMENT 38 YS2-10g19.q1k vc_7 268 305 13525 13562 F 38 100.00 305 reject_low 7 ALIGNMENT 211 YS2-10g19.p1k chr13 29 255 709135 709361 F 227 98.24 272 accept_chi 0 ALIGNMENT 0 YS2-10g19.q1k vc_2 265 62 2145 2144 C 204 0.00 305 reject_low 3 ALIGNMENT 0 YS2-10g19.p1k chr13 256 272 709361 709360 F 17 0.00 272 accept_chi 0 ALIGNMENT 40 YS2-10g19.q1k vc_2 305 266 2105 2144 C 40 100.00 305 reject_low 3 ALIGNMENT 36 YS2-10g19.q1k vc_5 302 267 1 36 C 36 100.00 305 reject_low 8 ALIGNMENT 0 YS2-10g19.q1k vc_5 266 62 5064 5063 C 205 0.00 305 reject_low 6 ALIGNMENT 39 YS2-10g19.q1k vc_5 305 267 5025 5063 C 39 100.00 305 reject_low 6 ALIGNMENT 0 YS2-10g19.q1k vc_7 62 267 13525 13524 F 206 0.00 305 reject_low 7 ALIGNMENT 0 YS2-10g19.q1k vc_3 265 62 2512 2511 C 204 0.00 305 reject_low 4 ALIGNMENT 0 YS2-10g19.q1k vc_1 265 62 2512 2511 C 204 0.00 305 reject_low 2 ALIGNMENT 0 YS2-10g19.q1k vc_5 266 62 37 36 C 205 0.00 305 reject_low 8 ALIGNMENT 0 YS2-10g19.q1k chr13 305 266 709136 709135 C 40 0.00 305 accept_chi 1 ALIGNMENT 0 YS2-10g19.q1k vc_4 62 265 5832 5831 F 204 0.00 305 reject_low 5 ALIGNMENT 1008 YS2-10g20.q1k chr10 40 1217 235800 236992 F 1178 95.84 1308 accept 0 ALIGNMENT 1086 YS2-10g20.p1k chr10 1291 30 239947 241211 C 1262 96.35 1336 accept 0 ALIGNMENT 368 YS2-10g21.q1k scplasm1 235 1201 4340 5297 F 967 80.56 1280 accept_chi 1 ALIGNMENT 739 YS2-10g21.p1k scplasm1 1122 28 969 2080 C 1095 90.32 1259 accept_chi 0 ALIGNMENT 39 YS2-10g22.q1k vc_5 261 223 5025 5063 C 39 100.00 261 reject_low 6 ALIGNMENT 0 YS2-10g22.q1k chr03 261 222 179895 179894 C 40 0.00 261 accept_chi 1 ALIGNMENT 0 YS2-10g22.p1k chr03 218 235 180076 180075 F 18 0.00 235 accept_chi 0 ALIGNMENT 36 YS2-10g22.q1k vc_5 258 223 1 36 C 36 100.00 261 reject_low 8 ALIGNMENT 171 YS2-10g22.p1k chr03 35 217 179894 180076 F 183 100.00 235 accept_chi 0 ALIGNMENT 40 YS2-10g22.q1k vc_4 222 261 5832 5871 F 40 100.00 261 reject_low 5 ALIGNMENT 0 YS2-10g22.q1k vc_3 221 62 2512 2511 C 160 0.00 261 reject_low 4 ALIGNMENT 0 YS2-10g22.q1k vc_4 62 221 5832 5831 F 160 0.00 261 reject_low 5 ALIGNMENT 0 YS2-10g22.q1k vc_7 62 223 13525 13524 F 162 0.00 261 reject_low 7 ALIGNMENT 40 YS2-10g22.q1k vc_2 261 222 2105 2144 C 40 100.00 261 reject_low 3 ALIGNMENT 38 YS2-10g22.q1k vc_7 224 261 13525 13562 F 38 100.00 261 reject_low 7 ALIGNMENT 0 YS2-10g22.q1k vc_1 221 62 2512 2511 C 160 0.00 261 reject_low 2 ALIGNMENT 0 YS2-10g22.q1k vc_5 222 62 5064 5063 C 161 0.00 261 reject_low 6 ALIGNMENT 0 YS2-10g22.q1k vc_2 221 62 2145 2144 C 160 0.00 261 reject_low 3 ALIGNMENT 171 YS2-10g22.q1k chr03 221 39 179894 180076 C 183 100.00 261 accept_chi 1 ALIGNMENT 40 YS2-10g22.q1k vc_3 261 222 2472 2511 C 40 100.00 261 reject_low 4 ALIGNMENT 0 YS2-10g22.q1k vc_5 222 62 37 36 C 161 0.00 261 reject_low 8 ALIGNMENT 40 YS2-10g22.q1k vc_1 261 222 2472 2511 C 40 100.00 261 reject_low 2 ALIGNMENT 1009 YS2-10g23.p1k chr07 33 1249 79007 80229 F 1217 95.32 1252 accept 0 ALIGNMENT 21 YS2-10g23.p1k chr07 67 32 79002 79037 C 36 97.22 1252 reject_low 1 ALIGNMENT 1010 YS2-10g23.q1k chr07 1241 41 83062 84267 C 1201 95.42 1245 accept 0 ALIGNMENT 0 YS2-10g23.p1k chr07 873 68 79003 79002 C 806 0.00 1252 reject_low 1 ALIGNMENT 0 YS2-10g24.q1k chr14 425 465 530399 530398 F 41 0.00 465 accept_chi 1 ALIGNMENT 0 YS2-10g24.q1k vc_1 424 62 2513 2512 C 363 0.00 465 reject_low 2 ALIGNMENT 38 YS2-10g24.q1k vc_7 428 465 13525 13562 F 38 100.00 465 reject_low 6 ALIGNMENT 0 YS2-10g24.q1k vc_3 424 62 2513 2512 C 363 0.00 465 reject_low 3 ALIGNMENT 41 YS2-10g24.q1k vc_4 425 465 5831 5871 F 41 100.00 465 reject_low 4 ALIGNMENT 41 YS2-10g24.q1k vc_3 465 425 2472 2512 C 41 100.00 465 reject_low 3 ALIGNMENT 0 YS2-10g24.q1k vc_4 62 424 5831 5830 F 363 0.00 465 reject_low 4 ALIGNMENT 0 YS2-10g24.q1k vc_7 62 427 13525 13524 F 366 0.00 465 reject_low 6 ALIGNMENT 39 YS2-10g24.q1k vc_5 465 427 5025 5063 C 39 100.00 465 reject_low 5 ALIGNMENT 0 YS2-10g24.q1k vc_5 426 62 5064 5063 C 365 0.00 465 reject_low 5 ALIGNMENT 387 YS2-10g24.q1k chr14 30 424 530005 530399 F 395 100.00 465 accept_chi 1 ALIGNMENT 41 YS2-10g24.q1k vc_1 465 425 2472 2512 C 41 100.00 465 reject_low 2 ALIGNMENT 36 YS2-10g24.q1k vc_5 462 427 1 36 C 36 100.00 465 reject_low 7 ALIGNMENT 0 YS2-10g24.q1k vc_5 426 62 37 36 C 365 0.00 465 reject_low 7 ALIGNMENT 387 YS2-10g24.p1k chr14 429 35 530005 530399 C 395 100.00 448 accept_chi 0 ALIGNMENT 0 YS2-10g24.p1k chr14 448 430 530006 530005 C 19 0.00 448 accept_chi 0 ALIGNMENT 0 YS2-10h01.p1k chr12 131 143 4982 5018 F 13 0.00 218 reject_low 14 ALIGNMENT 0 YS2-10h01.p1k chr08 131 143 4714 4750 F 13 0.00 218 reject_low 13 ALIGNMENT 54 YS2-10h01.p1k chr02 144 199 5220 5275 F 56 100.00 218 reject_low 10 ALIGNMENT 0 YS2-10h01.p1k chr02 131 143 5183 5219 F 13 0.00 218 reject_low 10 ALIGNMENT 0 YS2-10h01.p1k chr12 176 218 10585 10584 F 43 0.00 218 reject_low 15 ALIGNMENT 0 YS2-10h01.p1k chr15 218 176 1085228 1085227 C 43 0.00 218 reject_low 18 ALIGNMENT 0 YS2-10h01.p1k chr12 143 131 1072295 1072331 C 13 0.00 218 reject_low 16 ALIGNMENT 76 YS2-10h01.p1k chr15 130 33 1085296 1085398 C 98 93.88 218 reject_low 18 ALIGNMENT 0 YS2-10h01.p1k chr16 218 200 943108 943107 C 19 0.00 218 reject_low 9 ALIGNMENT 0 YS2-10h01.p1k chr07 143 131 1085005 1085041 C 13 0.00 218 reject_low 6 ALIGNMENT 76 YS2-10h01.p1k chr12 130 33 1072332 1072434 C 98 93.88 218 reject_low 16 ALIGNMENT 0 YS2-10h01.p1k chr12 176 218 5050 5049 F 43 0.00 218 reject_low 14 ALIGNMENT 0 YS2-10h01.p1k chr06 131 143 4015 4051 F 13 0.00 218 reject_low 3 ALIGNMENT 54 YS2-10h01.p1k chr10 144 199 6336 6391 F 56 100.00 218 reject_low 5 ALIGNMENT 76 YS2-10h01.p1k chr12 33 130 4879 4981 F 98 93.88 218 reject_low 14 ALIGNMENT 76 YS2-10h01.p1k chr13 33 130 4755 4857 F 98 93.88 218 reject_low 17 ALIGNMENT 0 YS2-10h01.p1k chr08 143 131 557613 557649 C 13 0.00 218 reject_low 11 ALIGNMENT 0 YS2-10h01.p1k chr09 131 143 6316 6352 F 13 0.00 218 reject_low 4 ALIGNMENT 0 YS2-10h01.p1k chr13 176 218 4926 4925 F 43 0.00 218 reject_low 17 ALIGNMENT 76 YS2-10h01.p1k chr12 33 130 10414 10516 F 98 93.88 218 reject_low 15 ALIGNMENT 32 YS2-10h01.p1k chr08 144 175 4751 4782 F 32 100.00 218 reject_low 13 ALIGNMENT 158 YS2-10h01.p1k chr05 33 199 5784 5950 F 167 99.40 218 ambiguous_tel 0 ALIGNMENT 0 YS2-10h01.p1k chr15 143 131 1085259 1085295 C 13 0.00 218 reject_low 18 ALIGNMENT 0 YS2-10h01.p1k chr08 176 218 4782 4781 F 43 0.00 218 reject_low 13 ALIGNMENT 95 YS2-10h01.p1k chr16 33 130 5738 5835 F 98 100.00 218 reject_low 8 ALIGNMENT 0 YS2-10h01.p1k chr05 218 200 570914 570913 C 19 0.00 218 ambiguous_tel 1 ALIGNMENT 0 YS2-10h01.p1k chr09 200 218 6408 6407 F 19 0.00 218 reject_low 4 ALIGNMENT 54 YS2-10h01.p1k chr06 144 199 4052 4107 F 56 100.00 218 reject_low 3 ALIGNMENT 0 YS2-10h01.p1k chr10 131 143 6299 6335 F 13 0.00 218 reject_low 5 ALIGNMENT 32 YS2-10h01.p1k chr15 175 144 1085227 1085258 C 32 100.00 218 reject_low 18 ALIGNMENT 0 YS2-10h01.p1k chr16 144 131 943162 943199 C 14 0.00 218 reject_low 9 ALIGNMENT 155 YS2-10h01.p1k chr12 199 33 1065716 1065882 C 167 98.80 218 ambiguous_tel 2 ALIGNMENT 0 YS2-10h01.p1k chr16 200 218 5928 5927 F 19 0.00 218 reject_low 8 ALIGNMENT 0 YS2-10h01.p1k chr14 131 143 5927 5963 F 13 0.00 218 reject_low 7 ALIGNMENT 92 YS2-10h01.p1k chr16 130 33 943200 943297 C 98 98.98 218 reject_low 9 ALIGNMENT 0 YS2-10h01.p1k chr07 218 200 1084950 1084949 C 19 0.00 218 reject_low 6 ALIGNMENT 0 YS2-10h01.p1k chr04 218 176 1526063 1526062 C 43 0.00 218 reject_low 12 ALIGNMENT 0 YS2-10h01.p1k chr12 218 176 1072264 1072263 C 43 0.00 218 reject_low 16 ALIGNMENT 0 YS2-10h01.p1k chr08 218 200 557558 557557 C 19 0.00 218 reject_low 11 ALIGNMENT 0 YS2-10h01.p1k chr10 200 218 6391 6390 F 19 0.00 218 reject_low 5 ALIGNMENT 32 YS2-10h01.p1k chr13 144 175 4895 4926 F 32 100.00 218 reject_low 17 ALIGNMENT 54 YS2-10h01.p1k chr08 199 144 557557 557612 C 56 100.00 218 reject_low 11 ALIGNMENT 54 YS2-10h01.p1k chr09 144 199 6353 6408 F 56 100.00 218 reject_low 4 ALIGNMENT 95 YS2-10h01.p1k chr14 33 130 5829 5926 F 98 100.00 218 reject_low 7 ALIGNMENT 51 YS2-10h01.p1k chr07 199 144 1084949 1085004 C 56 98.21 218 reject_low 6 ALIGNMENT 0 YS2-10h01.p1k chr04 143 131 1526094 1526130 C 13 0.00 218 reject_low 12 ALIGNMENT 0 YS2-10h01.p1k chr16 131 143 5836 5872 F 13 0.00 218 reject_low 8 ALIGNMENT 51 YS2-10h01.p1k chr16 144 199 5873 5928 F 56 98.21 218 reject_low 8 ALIGNMENT 95 YS2-10h01.p1k chr07 130 33 1085042 1085139 C 98 100.00 218 reject_low 6 ALIGNMENT 95 YS2-10h01.p1k chr06 33 130 3917 4014 F 98 100.00 218 reject_low 3 ALIGNMENT 0 YS2-10h01.p1k chr12 131 143 10517 10553 F 13 0.00 218 reject_low 15 ALIGNMENT 155 YS2-10h01.p1k chr05 199 33 570913 571079 C 167 98.80 218 ambiguous_tel 1 ALIGNMENT 76 YS2-10h01.p1k chr08 33 130 4611 4713 F 98 93.88 218 reject_low 13 ALIGNMENT 0 YS2-10h01.p1k chr05 200 218 5950 5949 F 19 0.00 218 ambiguous_tel 0 ALIGNMENT 76 YS2-10h01.p1k chr08 130 33 557650 557752 C 98 93.88 218 reject_low 11 ALIGNMENT 95 YS2-10h01.p1k chr09 33 130 6218 6315 F 98 100.00 218 reject_low 4 ALIGNMENT 0 YS2-10h01.p1k chr12 218 200 1065717 1065716 C 19 0.00 218 ambiguous_tel 2 ALIGNMENT 32 YS2-10h01.p1k chr12 144 175 5019 5050 F 32 100.00 218 reject_low 14 ALIGNMENT 76 YS2-10h01.p1k chr04 130 33 1526131 1526233 C 98 93.88 218 reject_low 12 ALIGNMENT 32 YS2-10h01.p1k chr12 175 144 1072263 1072294 C 32 100.00 218 reject_low 16 ALIGNMENT 0 YS2-10h01.p1k chr06 200 218 4107 4106 F 19 0.00 218 reject_low 3 ALIGNMENT 0 YS2-10h01.p1k chr14 200 218 6019 6018 F 19 0.00 218 reject_low 7 ALIGNMENT 32 YS2-10h01.p1k chr12 144 175 10554 10585 F 32 100.00 218 reject_low 15 ALIGNMENT 32 YS2-10h01.p1k chr04 175 144 1526062 1526093 C 32 100.00 218 reject_low 12 ALIGNMENT 95 YS2-10h01.p1k chr10 33 130 6201 6298 F 98 100.00 218 reject_low 5 ALIGNMENT 0 YS2-10h01.p1k chr13 131 143 4858 4894 F 13 0.00 218 reject_low 17 ALIGNMENT 53 YS2-10h01.p1k chr16 199 145 943107 943161 C 55 100.00 218 reject_low 9 ALIGNMENT 76 YS2-10h01.p1k chr02 33 130 5080 5182 F 98 93.88 218 reject_low 10 ALIGNMENT 51 YS2-10h01.p1k chr14 144 199 5964 6019 F 56 98.21 218 reject_low 7 ALIGNMENT 0 YS2-10h01.p1k chr02 200 218 5275 5274 F 19 0.00 218 reject_low 10 ALIGNMENT 930 YS2-10h03.q1k chr13 33 1098 651193 652274 F 1066 97.19 1282 accept 0 ALIGNMENT 201 YS2-10h03.q1k chr16 748 459 75699 75988 C 290 90.34 1282 reject_low 1 ALIGNMENT 992 YS2-10h03.p1k chr13 1171 31 654685 655837 C 1141 96.23 1286 accept 0 ALIGNMENT 0 YS2-10h03.q1k chr16 458 62 75989 75988 C 397 0.00 1282 reject_low 1 ALIGNMENT 0 YS2-10h03.q1k chr16 849 749 75700 75699 C 101 0.00 1282 reject_low 1 ALIGNMENT 443 YS2-10h04.q1k chr14 38 528 266955 267444 F 491 99.19 1384 accept 0 ALIGNMENT 910 YS2-10h04.p1k chr14 1270 75 270863 272069 C 1196 93.06 1317 accept 0 ALIGNMENT 0 YS2-10h05.q1k vc_7 587 588 5172 6360 C 0 0.00 1364 reject_low 8 ALIGNMENT 338 YS2-10h05.q1k vc_2 377 832 2164 2619 F 456 91.89 1364 reject_low 5 ALIGNMENT 338 YS2-10h05.q1k vc_1 377 832 2531 2986 F 456 91.89 1364 reject_low 4 ALIGNMENT 0 YS2-10h05.q1k vc_3 62 376 2531 2530 F 315 0.00 1364 reject_low 6 ALIGNMENT 0 YS2-10h05.q1k vc_1 62 376 2531 2530 F 315 0.00 1364 reject_low 4 ALIGNMENT 0 YS2-10h05.q1k vc_4 62 376 6353 6352 F 315 0.00 1364 reject_low 9 ALIGNMENT 0 YS2-10h05.q1k vc_2 62 376 2164 2163 F 315 0.00 1364 reject_low 5 ALIGNMENT 0 YS2-10h05.q1k vc_5 62 376 2398 2397 F 315 0.00 1364 reject_low 1 ALIGNMENT 393 YS2-10h05.q1k vc_7 1067 377 2042 2727 C 691 86.83 1364 reject_low 2 ALIGNMENT 51 YS2-10h05.q1k vc_7 588 537 6360 6411 C 52 100.00 1364|1,0 reject_low 8 ALIGNMENT 250 YS2-10h05.q1k chr07 351 86 338009 338274 C 266 98.87 1364 reject_bad_break 0 ALIGNMENT 57 YS2-10h05.q1k vc_4 844 1067 1881 2099 F 224 78.57 1364 reject_low 7 ALIGNMENT 129 YS2-10h05.q1k vc_4 377 538 126 287 F 162 93.83 1364 reject_low 7 ALIGNMENT 0 YS2-10h05.q1k vc_4 376 62 5813 5812 C 315 0.00 1364 reject_low 3 ALIGNMENT 361 YS2-10h05.q1k vc_4 939 377 5250 5812 C 563 88.99 1364 reject_low 3 ALIGNMENT 0 YS2-10h05.q1k vc_7 376 62 2728 2727 C 315 0.00 1364 reject_low 2 ALIGNMENT 26 YS2-10h05.q1k chr07 61 34 338266 338293 C 28 100.00 1364 reject_bad_break 0 ALIGNMENT 0 YS2-10h05.q1k vc_4 376 62 1535 1534 C 315 0.00 1364 reject_low 10 ALIGNMENT 0 YS2-10h05.q1k vc_7 536 62 6412 6411 C 475 0.00 1364 reject_low 8 ALIGNMENT 158 YS2-10h05.q1k vc_7 832 587 4927 5172 C 246 88.62 1364|0,1 reject_low 8 ALIGNMENT 338 YS2-10h05.q1k vc_3 377 832 2531 2986 F 456 91.89 1364 reject_low 6 ALIGNMENT 129 YS2-10h05.q1k vc_4 377 538 6353 6514 F 162 93.83 1364 reject_low 9 ALIGNMENT 0 YS2-10h05.q1k vc_4 539 843 288 1880 F 305 0.00 1364 reject_low 7 ALIGNMENT 0 YS2-10h05.q1k chr07 85 62 338275 338265 C 24 0.00 1364 reject_bad_break 0 ALIGNMENT 0 YS2-10h05.q1k vc_4 62 376 126 125 F 315 0.00 1364 reject_low 7 ALIGNMENT 71 YS2-10h05.q1k vc_4 461 377 1450 1534 C 85 95.29 1364 reject_low 10 ALIGNMENT 393 YS2-10h05.q1k vc_5 377 1067 2398 3083 F 691 86.83 1364 reject_low 1 ALIGNMENT 141 YS2-10h06.p1k vc_5 1225 987 4783 5025 C 239 87.87 1355 reject_low 6 ALIGNMENT 141 YS2-10h06.p1k vc_7 987 1225 13562 13804 F 239 87.87 1355 reject_low 8 ALIGNMENT 0 YS2-10h06.p1k vc_4 122 986 5871 5870 F 865 0.00 1355 reject_low 5 ALIGNMENT 141 YS2-10h06.p1k vc_3 1225 987 1863 2105 C 239 87.87 1355 reject_low 4 ALIGNMENT 141 YS2-10h06.p1k vc_1 1225 987 1863 2105 C 239 87.87 1355 reject_low 2 ALIGNMENT 0 YS2-10h06.p1k vc_3 986 122 2106 2105 C 865 0.00 1355 reject_low 4 ALIGNMENT 0 YS2-10h06.p1k vc_7 122 986 100 99 F 865 0.00 1355 reject_low 7 ALIGNMENT 855 YS2-10h06.p1k chr09 970 59 294870 295779 C 912 98.79 1355 accept_chi 0 ALIGNMENT 0 YS2-10h06.p1k vc_1 986 122 2106 2105 C 865 0.00 1355 reject_low 2 ALIGNMENT 141 YS2-10h06.p1k vc_4 987 1225 5871 6113 F 239 87.87 1355 reject_low 5 ALIGNMENT 141 YS2-10h06.p1k vc_7 987 1225 100 342 F 239 87.87 1355 reject_low 7 ALIGNMENT 0 YS2-10h06.p1k vc_5 986 122 5026 5025 C 865 0.00 1355 reject_low 6 ALIGNMENT 387 YS2-10h06.q1k chr09 27 701 294870 295542 F 675 86.52 1426 accept_chi 1 ALIGNMENT 0 YS2-10h06.p1k vc_2 986 122 2106 2105 C 865 0.00 1355 reject_low 3 ALIGNMENT 0 YS2-10h06.p1k vc_7 122 986 13562 13561 F 865 0.00 1355 reject_low 8 ALIGNMENT 141 YS2-10h06.p1k vc_2 1225 987 1863 2105 C 239 87.87 1355 reject_low 3 ALIGNMENT 32 YS2-10h08.p1k chr16 326 236 650491 650581 C 91 89.01 1324 reject_low 1 ALIGNMENT 0 YS2-10h08.p1k chr12 928 327 701204 701203 C 602 0.00 1324 reject_low 4 ALIGNMENT 22 YS2-10h08.p1k chr05 315 272 81195 81238 C 44 95.45 1324 reject_low 8 ALIGNMENT 0 YS2-10h08.p1k chr16 234 62 650559 650558 C 173 0.00 1324 reject_low 2 ALIGNMENT 0 YS2-10h08.p1k chr04 928 327 390423 390422 C 602 0.00 1324 reject_low 6 ALIGNMENT 0 YS2-10h08.p1k chr09 62 236 105318 105317 F 175 0.00 1324 reject_low 5 ALIGNMENT 0 YS2-10h08.p1k chr12 253 62 701276 701275 C 192 0.00 1324 reject_low 4 ALIGNMENT 21 YS2-10h08.p1k chr04 326 239 390422 390509 C 88 85.23 1324 reject_low 6 ALIGNMENT 26 YS2-10h08.p1k chr09 237 326 105318 105407 F 90 86.67 1324 reject_low 5 ALIGNMENT 0 YS2-10h08.p1k chr09 327 928 105407 105406 F 602 0.00 1324 reject_low 5 ALIGNMENT 0 YS2-10h08.p1k chr07 928 327 431419 431418 C 602 0.00 1324 reject_low 7 ALIGNMENT 0 YS2-10h08.p1k chr04 238 62 390510 390509 C 177 0.00 1324 reject_low 6 ALIGNMENT 0 YS2-10h08.p1k chr16 928 327 650492 650491 C 602 0.00 1324 reject_low 1 ALIGNMENT 970 YS2-10h08.q1k chr13 35 1222 582737 583939 F 1188 95.37 1358 accept 0 ALIGNMENT 0 YS2-10h08.p1k chr16 235 62 650582 650581 C 174 0.00 1324 reject_low 1 ALIGNMENT 0 YS2-10h08.p1k chr07 274 62 431471 431470 C 213 0.00 1324 reject_low 7 ALIGNMENT 0 YS2-10h08.p1k chr04 928 310 390404 390403 C 619 0.00 1324 reject_low 3 ALIGNMENT 0 YS2-10h08.p1k chr05 928 316 81196 81195 C 613 0.00 1324 reject_low 8 ALIGNMENT 0 YS2-10h08.p1k chr05 271 62 81239 81238 C 210 0.00 1324 reject_low 8 ALIGNMENT 27 YS2-10h08.p1k chr04 309 235 390403 390477 C 75 89.33 1324 reject_low 3 ALIGNMENT 29 YS2-10h08.p1k chr12 326 254 701203 701275 C 73 90.41 1324 reject_low 4 ALIGNMENT 0 YS2-10h08.p1k chr16 928 329 650466 650465 C 600 0.00 1324 reject_low 2 ALIGNMENT 21 YS2-10h08.p1k chr07 326 275 431418 431470 C 52 92.31 1324 reject_low 7 ALIGNMENT 0 YS2-10h08.p1k chr04 234 62 390478 390477 C 173 0.00 1324 reject_low 3 ALIGNMENT 917 YS2-10h08.p1k chr13 1183 29 586760 587943 C 1155 94.81 1324 accept 0 ALIGNMENT 29 YS2-10h08.p1k chr16 328 235 650465 650558 C 94 87.23 1324 reject_low 2 ALIGNMENT 24 YS2-10h09.p1k chrm 850 826 68601 68625 C 25 100.00 1389 reject_low 4 ALIGNMENT 78 YS2-10h09.p1k chrm 715 813 85582 85679 F 99 94.95 1389 reject_low 1 ALIGNMENT 108 YS2-10h09.p1k chrm 845 1146 13628 13937 F 302 87.09 1389 reject_bad_break 0 ALIGNMENT 0 YS2-10h09.p1k chrm 62 709 77053 77052 F 648 0.00 1389 reject_low 3 ALIGNMENT 442 YS2-10h09.p1k chrm 38 721 12946 13630 F 684 99.71 1389 reject_bad_break 0 ALIGNMENT 0 YS2-10h09.p1k chrm 774 771 68636 68648 C 4 0.00 1389 reject_low 4 ALIGNMENT 38 YS2-10h09.p1k chrm 813 717 2537 2639 C 97 83.51 1389 reject_low 2 ALIGNMENT 0 YS2-10h09.p1k chrm 722 844 13631 13627 F 123 0.00 1389 reject_bad_break 0 ALIGNMENT 186 YS2-10h09.q1k chrm 395 51 13630 13984 C 345 89.57 1237 reject_bad_break 0 ALIGNMENT 0 YS2-10h09.p1k chrm 716 62 2640 2639 C 655 0.00 1389 reject_low 2 ALIGNMENT 0 YS2-10h09.p1k chrm 745 62 68674 68673 C 684 0.00 1389 reject_low 4 ALIGNMENT 20 YS2-10h09.p1k chrm 770 746 68649 68673 C 25 96.00 1389 reject_low 4 ALIGNMENT 0 YS2-10h09.p1k chrm 62 714 85582 85581 F 653 0.00 1389 reject_low 1 ALIGNMENT 0 YS2-10h09.p1k chrm 825 799 68626 68611 C 27 0.00 1389 reject_low 4 ALIGNMENT 30 YS2-10h09.p1k chrm 710 760 77053 77099 F 51 90.20 1389 reject_low 3 ALIGNMENT 23 YS2-10h09.p1k chrm 798 775 68612 68635 C 24 100.00 1389 reject_low 4 ALIGNMENT 0 YS2-10h09.p1k chrm 761 789 77099 77098 F 29 0.00 1389 reject_low 3 ALIGNMENT 688 YS2-10h10.q1k chr14 796 30 642607 643372 C 767 97.65 1243 accept 0 ALIGNMENT 954 YS2-10h10.p1k chr14 37 1131 638467 639577 F 1095 96.99 1328 accept 0 ALIGNMENT 362 YS2-10h11.q1k chr12 224 1001 617869 618642 F 778 82.90 1344 accept 0 ALIGNMENT 737 YS2-10h12.q1k chr08 48 843 430740 431532 F 796 98.49 1331 accept 0 ALIGNMENT 1064 YS2-10h12.p1k chr08 1253 29 434598 435826 C 1225 96.41 1358 accept 0 ALIGNMENT 361 YS2-10h13.q1k chr12 401 38 453135 453498 C 364 100.00 442 reject_low 1 ALIGNMENT 0 YS2-10h13.q1k vc_1 401 62 2513 2512 C 340 0.00 442 reject_low 3 ALIGNMENT 36 YS2-10h13.q1k vc_5 439 404 1 36 C 36 100.00 442 reject_low 8 ALIGNMENT 39 YS2-10h13.q1k vc_5 442 404 5025 5063 C 39 100.00 442 reject_low 6 ALIGNMENT 356 YS2-10h13.p1k chr12 34 392 462277 462635 F 359 100.00 411 reject_low 2 ALIGNMENT 0 YS2-10h13.q1k vc_7 62 404 13525 13524 F 343 0.00 442 reject_low 7 ALIGNMENT 41 YS2-10h13.q1k vc_1 442 402 2472 2512 C 41 100.00 442 reject_low 3 ALIGNMENT 356 YS2-10h13.p1k chr12 34 392 453140 453498 F 359 100.00 411 accept 0 ALIGNMENT 0 YS2-10h13.q1k vc_5 403 62 5064 5063 C 342 0.00 442 reject_low 6 ALIGNMENT 361 YS2-10h13.q1k chr12 401 38 462272 462635 C 364 100.00 442 accept 0 ALIGNMENT 41 YS2-10h13.q1k vc_3 442 402 2472 2512 C 41 100.00 442 reject_low 4 ALIGNMENT 0 YS2-10h13.q1k vc_4 62 401 5831 5830 F 340 0.00 442 reject_low 5 ALIGNMENT 0 YS2-10h13.q1k vc_5 403 62 37 36 C 342 0.00 442 reject_low 8 ALIGNMENT 0 YS2-10h13.p1k chr12 393 411 453498 453497 F 19 0.00 411 accept 0 ALIGNMENT 0 YS2-10h13.p1k chr12 393 411 462635 462634 F 19 0.00 411 reject_low 2 ALIGNMENT 0 YS2-10h13.q1k vc_3 401 62 2513 2512 C 340 0.00 442 reject_low 4 ALIGNMENT 38 YS2-10h13.q1k vc_7 405 442 13525 13562 F 38 100.00 442 reject_low 7 ALIGNMENT 41 YS2-10h13.q1k vc_4 402 442 5831 5871 F 41 100.00 442 reject_low 5 ALIGNMENT 0 YS2-10h13.q1k chr12 442 402 462273 462272 C 41 0.00 442 accept 0 ALIGNMENT 0 YS2-10h13.q1k chr12 442 402 453136 453135 C 41 0.00 442 reject_low 1 ALIGNMENT 218 YS2-10h14.q1k chr11 265 29 398640 398876 C 237 97.89 303 accept_chi 1 ALIGNMENT 39 YS2-10h14.q1k vc_5 303 265 5025 5063 C 39 100.00 303 reject_low 5 ALIGNMENT 0 YS2-10h14.q1k vc_1 262 62 2513 2512 C 201 0.00 303 reject_low 2 ALIGNMENT 230 YS2-10h14.p1k chr11 27 263 398640 398876 F 237 99.58 281 accept_chi 0 ALIGNMENT 0 YS2-10h14.q1k vc_5 264 62 37 36 C 203 0.00 303 reject_low 7 ALIGNMENT 41 YS2-10h14.q1k vc_1 303 263 2472 2512 C 41 100.00 303 reject_low 2 ALIGNMENT 0 YS2-10h14.q1k chr11 303 266 398641 398640 C 38 0.00 303 accept_chi 1 ALIGNMENT 41 YS2-10h14.q1k vc_4 263 303 5831 5871 F 41 100.00 303 reject_low 4 ALIGNMENT 0 YS2-10h14.q1k vc_3 262 62 2513 2512 C 201 0.00 303 reject_low 3 ALIGNMENT 0 YS2-10h14.p1k chr11 264 281 398876 398875 F 18 0.00 281 accept_chi 0 ALIGNMENT 0 YS2-10h14.q1k vc_4 62 262 5831 5830 F 201 0.00 303 reject_low 4 ALIGNMENT 0 YS2-10h14.q1k vc_7 62 265 13525 13524 F 204 0.00 303 reject_low 6 ALIGNMENT 36 YS2-10h14.q1k vc_5 300 265 1 36 C 36 100.00 303 reject_low 7 ALIGNMENT 41 YS2-10h14.q1k vc_3 303 263 2472 2512 C 41 100.00 303 reject_low 3 ALIGNMENT 38 YS2-10h14.q1k vc_7 266 303 13525 13562 F 38 100.00 303 reject_low 6 ALIGNMENT 0 YS2-10h14.q1k vc_5 264 62 5064 5063 C 203 0.00 303 reject_low 5 ALIGNMENT 972 YS2-10h15.p1k chr16 32 1124 634699 635806 F 1093 97.16 1318 accept 0 ALIGNMENT 1093 YS2-10h15.q1k chr16 1304 51 637757 639007 C 1254 95.77 1426 accept 0 ALIGNMENT 404 YS2-10h17.p1k vc_7 1 602 456 1058 F 602 90.37 690 reject_vc 6 ALIGNMENT 410 YS2-10h17.p1k vc_2 602 1 1147 1749 C 602 91.20 690 reject_vc 4 ALIGNMENT 0 YS2-10h17.q1k vc_2 315 62 2147 2146 C 254 0.00 357 reject_low 9 ALIGNMENT 38 YS2-10h17.q1k vc_7 320 357 13525 13562 F 38 100.00 357 reject_low 13 ALIGNMENT 0 YS2-10h17.q1k vc_3 315 62 2514 2513 C 254 0.00 357 reject_low 10 ALIGNMENT 0 YS2-10h17.q1k vc_1 315 62 2514 2513 C 254 0.00 357 reject_low 8 ALIGNMENT 413 YS2-10h17.p1k vc_6 1 602 3712 4314 F 602 90.86 690 reject_vc 2 ALIGNMENT 0 YS2-10h17.q1k chr04 317 357 186602 186601 F 41 0.00 357 accept 0 ALIGNMENT 42 YS2-10h17.q1k vc_4 316 357 5830 5871 F 42 100.00 357 reject_low 11 ALIGNMENT 261 YS2-10h17.q1k chr04 40 316 186325 186602 F 277 99.64 357 accept 0 ALIGNMENT 0 YS2-10h17.q1k vc_5 318 62 37 36 C 257 0.00 357 reject_low 14 ALIGNMENT 42 YS2-10h17.q1k vc_3 357 316 2472 2513 C 42 100.00 357 reject_low 10 ALIGNMENT 413 YS2-10h17.p1k vc_5 602 1 4067 4669 C 602 91.36 690 reject_vc 1 ALIGNMENT 0 YS2-10h17.q1k vc_4 62 315 5830 5829 F 254 0.00 357 reject_low 11 ALIGNMENT 42 YS2-10h17.q1k vc_1 357 316 2472 2513 C 42 100.00 357 reject_low 8 ALIGNMENT 410 YS2-10h17.p1k vc_1 602 1 1147 1749 C 602 91.20 690 reject_vc 3 ALIGNMENT 0 YS2-10h17.q1k vc_5 318 62 5064 5063 C 257 0.00 357 reject_low 12 ALIGNMENT 39 YS2-10h17.q1k vc_5 357 319 5025 5063 C 39 100.00 357 reject_low 12 ALIGNMENT 410 YS2-10h17.p1k vc_3 602 1 1147 1749 C 602 91.20 690 reject_vc 5 ALIGNMENT 404 YS2-10h17.p1k vc_7 1 602 13918 14520 F 602 90.37 690 reject_vc 7 ALIGNMENT 42 YS2-10h17.q1k vc_2 357 316 2105 2146 C 42 100.00 357 reject_low 9 ALIGNMENT 36 YS2-10h17.q1k vc_5 354 319 1 36 C 36 100.00 357 reject_low 14 ALIGNMENT 0 YS2-10h17.q1k vc_7 62 319 13525 13524 F 258 0.00 357 reject_low 13 ALIGNMENT 0 YS2-10h18.q1k vc_4 830 107 6338 6337 C 724 0.00 1340 reject_low 16 ALIGNMENT 33 YS2-10h18.q1k vc_5 431 396 1 36 C 36 97.22 1340 reject_low 14 ALIGNMENT 0 YS2-10h18.q1k vc_4 107 433 126 125 F 327 0.00 1340 reject_low 15 ALIGNMENT 0 YS2-10h18.q1k vc_7 433 107 2728 2727 C 327 0.00 1340 reject_low 2 ALIGNMENT 34 YS2-10h18.q1k vc_4 885 831 6281 6337 C 55 89.09 1340 reject_low 16 ALIGNMENT 0 YS2-10h18.q1k vc_1 107 433 2531 2530 F 327 0.00 1340 reject_low 4 ALIGNMENT 0 YS2-10h18.q1k vc_2 393 107 2146 2145 C 287 0.00 1340 reject_low 10 ALIGNMENT 0 YS2-10h18.q1k vc_3 107 433 2531 2530 F 327 0.00 1340 reject_low 6 ALIGNMENT 0 YS2-10h18.q1k vc_4 107 393 5831 5830 F 287 0.00 1340 reject_low 8 ALIGNMENT 0 YS2-10h18.q1k vc_3 393 107 2513 2512 C 287 0.00 1340 reject_low 11 ALIGNMENT 338 YS2-10h18.q1k vc_4 1003 434 5237 5812 C 570 87.02 1340 reject_low 3 ALIGNMENT 0 YS2-10h18.q1k vc_7 643 107 5173 5172 C 537 0.00 1340 reject_low 7 ALIGNMENT 0 YS2-10h18.q1k vc_2 107 433 2164 2163 F 327 0.00 1340 reject_low 5 ALIGNMENT 34 YS2-10h18.q1k vc_4 831 885 1550 1606 F 55 89.09 1340 reject_low 15 ALIGNMENT 324 YS2-10h18.q1k vc_2 434 896 2164 2628 F 463 90.28 1340 reject_low 5 ALIGNMENT 0 YS2-10h18.q1k vc_4 433 107 1535 1534 C 327 0.00 1340 reject_low 17 ALIGNMENT 0 YS2-10h18.q1k vc_5 107 433 2398 2397 F 327 0.00 1340 reject_low 1 ALIGNMENT 324 YS2-10h18.q1k vc_1 434 896 2531 2995 F 463 90.28 1340 reject_low 4 ALIGNMENT 324 YS2-10h18.q1k vc_3 434 896 2531 2995 F 463 90.28 1340 reject_low 6 ALIGNMENT 0 YS2-10h18.q1k vc_4 596 830 288 1549 F 235 0.00 1340 reject_low 15 ALIGNMENT 360 YS2-10h18.q1k vc_7 1071 434 2087 2727 C 638 86.21 1340 reject_low 2 ALIGNMENT 0 YS2-10h18.q1k vc_5 395 107 37 36 C 289 0.00 1340 reject_low 14 ALIGNMENT 38 YS2-10h18.q1k vc_1 434 394 2472 2512 C 41 97.56 1340 reject_low 9 ALIGNMENT 38 YS2-10h18.q1k vc_4 394 434 5831 5871 F 41 97.56 1340 reject_low 8 ALIGNMENT 0 YS2-10h18.q1k vc_5 395 107 5064 5063 C 289 0.00 1340 reject_low 12 ALIGNMENT 36 YS2-10h18.q1k vc_5 434 396 5025 5063 C 39 97.44 1340 reject_low 12 ALIGNMENT 0 YS2-10h18.q1k vc_4 830 523 111 1445 C 308 0.00 1340 reject_low 17 ALIGNMENT 167 YS2-10h18.q1k vc_7 885 644 4929 5172 C 242 90.08 1340 reject_low 7 ALIGNMENT 113 YS2-10h18.q1k vc_4 434 595 6353 6514 F 162 90.12 1340|1,0 reject_low 8 ALIGNMENT 113 YS2-10h18.q1k vc_4 434 595 126 287 F 162 90.12 1340 reject_low 15 ALIGNMENT 72 YS2-10h18.q1k vc_4 522 434 1446 1534 C 89 94.38 1340 reject_low 17 ALIGNMENT 0 YS2-10h18.q1k vc_4 435 434 5872 6353 F 0 0.00 1340 reject_low 8 ALIGNMENT 308 YS2-10h18.q1k chr14 48 394 68052 68398 F 347 97.69 1340 accept 0 ALIGNMENT 369 YS2-10h18.q1k vc_5 434 1218 2398 3186 F 785 83.18 1340 reject_low 1 ALIGNMENT 0 YS2-10h18.q1k vc_7 107 396 13525 13524 F 290 0.00 1340 reject_low 13 ALIGNMENT 35 YS2-10h18.q1k vc_7 397 434 13525 13562 F 38 97.37 1340 reject_low 13 ALIGNMENT 0 YS2-10h18.q1k vc_4 433 107 5813 5812 C 327 0.00 1340 reject_low 3 ALIGNMENT 38 YS2-10h18.q1k vc_3 434 394 2472 2512 C 41 97.56 1340 reject_low 11 ALIGNMENT 38 YS2-10h18.q1k vc_2 434 394 2105 2145 C 41 97.56 1340 reject_low 10 ALIGNMENT 34 YS2-10h18.q1k vc_4 885 831 54 110 C 55 89.09 1340 reject_low 17 ALIGNMENT 0 YS2-10h18.q1k vc_1 393 107 2513 2512 C 287 0.00 1340 reject_low 9 ALIGNMENT 982 YS2-10h19.p1k chr16 30 1185 459474 460643 F 1156 96.54 1304 reject_bad_break 0 ALIGNMENT 262 YS2-10h19.q1k chr16 482 72 465141 465552 C 411 86.62 1352 reject_bad_break 0 ALIGNMENT 0 YS2-10h19.q1k chr16 71 55 465553 465569 C 17 0.00 1352 reject_bad_break 0 ALIGNMENT 22 YS2-10h19.q1k chr16 54 30 465570 465594 C 25 96.00 1352 reject_bad_break 0 ALIGNMENT 151 YS2-10h19.q1k chr11 416 110 283663 283969 C 307 82.74 1352 reject_low 1 ALIGNMENT 1044 YS2-10h20.p1k chr15 1198 36 1009724 1010900 C 1163 97.25 1309 accept 0 ALIGNMENT 978 YS2-10h20.q1k chr15 40 1154 1005841 1006970 F 1115 96.68 1295 accept 0 ALIGNMENT 125 YS2-10h21.q1k chr12 521 198 1043797 1044120 C 324 80.56 1376 accept_chi 1 ALIGNMENT 605 YS2-10h21.p1k chr15 1054 7 170586 171630 C 1048 87.02 1235 accept_chi 0 ALIGNMENT 0 YS2-10h22.q1k vc_3 226 62 2513 2512 C 165 0.00 267 reject_low 3 ALIGNMENT 38 YS2-10h22.q1k vc_7 230 267 13525 13562 F 38 100.00 267 reject_low 6 ALIGNMENT 188 YS2-10h22.p1k chr13 226 34 319589 319781 C 193 99.48 244 accept_chi 0 ALIGNMENT 36 YS2-10h22.q1k vc_5 264 229 1 36 C 36 100.00 267 reject_low 7 ALIGNMENT 41 YS2-10h22.q1k vc_3 267 227 2472 2512 C 41 100.00 267 reject_low 3 ALIGNMENT 0 YS2-10h22.q1k vc_5 228 62 5064 5063 C 167 0.00 267 reject_low 5 ALIGNMENT 0 YS2-10h22.q1k vc_7 62 229 13525 13524 F 168 0.00 267 reject_low 6 ALIGNMENT 182 YS2-10h22.q1k chr13 31 226 319589 319786 F 196 98.47 267 accept_chi 1 ALIGNMENT 0 YS2-10h22.q1k vc_4 62 226 5831 5830 F 165 0.00 267 reject_low 4 ALIGNMENT 39 YS2-10h22.q1k vc_5 267 229 5025 5063 C 39 100.00 267 reject_low 5 ALIGNMENT 0 YS2-10h22.q1k vc_5 228 62 37 36 C 167 0.00 267 reject_low 7 ALIGNMENT 41 YS2-10h22.q1k vc_1 267 227 2472 2512 C 41 100.00 267 reject_low 2 ALIGNMENT 0 YS2-10h22.q1k vc_1 226 62 2513 2512 C 165 0.00 267 reject_low 2 ALIGNMENT 41 YS2-10h22.q1k vc_4 227 267 5831 5871 F 41 100.00 267 reject_low 4 ALIGNMENT 0 YS2-10h22.q1k chr13 227 267 319786 319785 F 41 0.00 267 accept_chi 1 ALIGNMENT 0 YS2-10h22.p1k chr13 244 227 319590 319589 C 18 0.00 244 accept_chi 0 ALIGNMENT 942 YS2-10h24.q1k chr12 38 1195 460450 461625 F 1158 94.91 1228 accept 0 ALIGNMENT 0 YS2-10h24.q1k chr12 62 497 489754 489753 F 436 0.00 1228 reject_low 2 ALIGNMENT 1051 YS2-10h24.p1k chr12 1242 34 453708 454913 C 1209 96.20 1247 reject_low 1 ALIGNMENT 560 YS2-10h24.q1k chr12 498 1195 489754 490456 F 698 94.13 1228 reject_low 2 ALIGNMENT 849 YS2-10h24.q1k chr12 143 1195 451419 452488 F 1053 94.68 1228 reject_low 1 ALIGNMENT 1051 YS2-10h24.p1k chr12 1242 34 462845 464050 C 1209 96.20 1247 accept 0 ALIGNMENT 0 YS2-10h24.q1k chr12 62 142 451419 451418 F 81 0.00 1228 reject_low 1 ALIGNMENT 770 YS2-10i01.q1k chr13 60 1082 372696 373720 F 1023 93.74 1304 reject_low 15 ALIGNMENT 884 YS2-10i01.q1k chr16 80 1273 850645 851827 F 1194 93.80 1304 ambiguous_trans 4 ALIGNMENT 0 YS2-10i01.q1k chr01 392 877 166163 166162 F 486 0.00 1304 reject_low 21 ALIGNMENT 62 YS2-10i01.q1k chr07 263 83 817206 817387 C 181 82.32 1304 reject_low 22 ALIGNMENT 778 YS2-10i01.q1k chr02 1082 60 264474 265492 C 1023 93.94 1304 reject_low 14 ALIGNMENT 0 YS2-10i01.q1k chr05 877 393 443366 443365 C 485 0.00 1304 reject_low 24 ALIGNMENT 0 YS2-10i01.q1k chr13 62 79 357024 357023 F 18 0.00 1304 reject_low 19 ALIGNMENT 781 YS2-10i01.q1k chr07 60 1082 817398 818416 F 1023 94.04 1304 reject_low 6 ALIGNMENT 0 YS2-10i01.q1k chr02 79 62 226936 226935 C 18 0.00 1304 reject_low 12 ALIGNMENT 22 YS2-10i01.q1k chr02 1247 1169 264320 264393 C 79 81.01 1304 reject_low 14 ALIGNMENT 938 YS2-10i01.q1k chr13 1273 59 188887 190084 C 1215 94.81 1304 ambiguous_trans 0 ALIGNMENT 907 YS2-10i01.q1k chr04 1273 58 1100485 1101689 C 1216 94.00 1304 ambiguous_trans 2 ALIGNMENT 675 YS2-10i01.q1k chr01 80 1273 160259 161440 F 1194 87.94 1304 reject_low 10 ALIGNMENT 0 YS2-10i01.q1k chr16 62 79 850645 850644 F 18 0.00 1304 ambiguous_trans 4 ALIGNMENT 743 YS2-10i01.q1k chr10 1082 60 482862 483886 C 1023 92.86 1304 reject_low 17 ALIGNMENT 0 YS2-10i01.q1k chr01 62 79 165847 165846 F 18 0.00 1304 reject_low 21 ALIGNMENT 764 YS2-10i01.q1k chr15 1273 80 122425 123607 C 1194 90.45 1304 reject_low 5 ALIGNMENT 781 YS2-10i01.q1k chr15 1082 60 599716 600734 C 1023 94.04 1304 reject_low 7 ALIGNMENT 688 YS2-10i01.q1k chr12 80 1273 475995 477176 F 1194 88.36 1304 reject_low 9 ALIGNMENT 20 YS2-10i01.q1k chr13 1158 1222 373791 373851 F 65 81.54 1304 reject_low 15 ALIGNMENT 28 YS2-10i01.q1k chr12 1158 1273 216176 216283 F 116 79.31 1304 reject_low 13 ALIGNMENT 0 YS2-10i01.q1k chr05 364 62 443393 443392 C 303 0.00 1304 reject_low 24 ALIGNMENT 0 YS2-10i01.q1k chr07 82 62 817388 817387 C 21 0.00 1304 reject_low 22 ALIGNMENT 674 YS2-10i01.q1k chr13 1273 81 201054 202234 C 1193 88.01 1304 reject_low 11 ALIGNMENT 0 YS2-10i01.q1k chr13 80 62 202235 202234 C 19 0.00 1304 reject_low 11 ALIGNMENT 0 YS2-10i01.q1k chr14 62 79 96630 96629 F 18 0.00 1304 reject_low 16 ALIGNMENT 0 YS2-10i01.q1k chr02 1168 1083 264394 264473 C 86 0.00 1304 reject_low 14 ALIGNMENT 772 YS2-10i01.q1k chr14 80 1082 96630 97628 F 1003 94.22 1304 reject_low 16 ALIGNMENT 20 YS2-10i01.q1k chr13 1158 1222 358093 358153 F 65 81.54 1304 reject_low 19 ALIGNMENT 938 YS2-10i01.q1k chr08 60 1273 543610 544806 F 1214 94.81 1304 ambiguous_trans 1 ALIGNMENT 25 YS2-10i01.q1k chr14 1175 1255 97714 97789 F 81 81.48 1304 reject_low 16 ALIGNMENT 0 YS2-10i01.q1k chr05 62 253 492691 492690 F 192 0.00 1304 reject_low 20 ALIGNMENT 20 YS2-10i01.q1k chr05 1158 1222 493586 493646 F 65 81.54 1304 reject_low 20 ALIGNMENT 0 YS2-10i01.q1k chr14 1083 1174 97629 97713 F 92 0.00 1304 reject_low 16 ALIGNMENT 760 YS2-10i01.q1k chr13 80 1082 357024 358022 F 1003 93.82 1304 reject_low 19 ALIGNMENT 0 YS2-10i01.q1k chr01 62 79 160259 160258 F 18 0.00 1304 reject_low 10 ALIGNMENT 0 YS2-10i01.q1k chr15 79 62 123608 123607 C 18 0.00 1304 reject_low 5 ALIGNMENT 908 YS2-10i01.q1k chr16 1273 60 849134 850336 C 1214 94.07 1304 ambiguous_trans 3 ALIGNMENT 0 YS2-10i01.q1k chr16 275 877 850392 850391 F 603 0.00 1304 reject_low 23 ALIGNMENT 0 YS2-10i01.q1k chr13 1083 1157 358023 358092 F 75 0.00 1304 reject_low 19 ALIGNMENT 0 YS2-10i01.q1k chr07 877 264 817207 817206 C 614 0.00 1304 reject_low 22 ALIGNMENT 29 YS2-10i01.q1k chr07 1274 1158 540486 540594 C 117 79.49 1304 reject_low 18 ALIGNMENT 609 YS2-10i01.q1k chr05 254 1082 492691 493515 F 829 93.00 1304 reject_low 20 ALIGNMENT 30 YS2-10i01.q1k chr10 1274 1175 482683 482776 C 100 81.00 1304 reject_low 17 ALIGNMENT 0 YS2-10i01.q1k chr12 1083 1157 216106 216175 F 75 0.00 1304 reject_low 13 ALIGNMENT 692 YS2-10i01.q1k chr05 59 1273 443392 444594 F 1215 88.15 1304 reject_low 8 ALIGNMENT 0 YS2-10i01.q1k chr07 1157 1083 540595 540664 C 75 0.00 1304 reject_low 18 ALIGNMENT 193 YS2-10i01.q1k chr01 80 391 165847 166163 F 312 89.74 1304 reject_low 21 ALIGNMENT 28 YS2-10i01.q1k chr16 234 274 850353 850392 F 41 95.12 1304 reject_low 23 ALIGNMENT 0 YS2-10i01.q1k chr10 1174 1083 482777 482861 C 92 0.00 1304 reject_low 17 ALIGNMENT 770 YS2-10i01.q1k chr12 60 1082 215081 216105 F 1023 93.74 1304 reject_low 13 ALIGNMENT 0 YS2-10i01.q1k chr12 62 79 475995 475994 F 18 0.00 1304 reject_low 9 ALIGNMENT 743 YS2-10i01.q1k chr07 1082 60 540665 541689 C 1023 92.86 1304 reject_low 18 ALIGNMENT 0 YS2-10i01.q1k chr13 1083 1157 373721 373790 F 75 0.00 1304 reject_low 15 ALIGNMENT 727 YS2-10i01.q1k chr02 1015 80 226002 226935 C 936 94.34 1304 reject_low 12 ALIGNMENT 21 YS2-10i01.q1k chr05 392 365 443365 443392 C 28 92.86 1304 reject_low 24 ALIGNMENT 0 YS2-10i01.q1k chr16 62 233 850353 850352 F 172 0.00 1304 reject_low 23 ALIGNMENT 0 YS2-10i01.q1k chr05 1083 1157 493516 493585 F 75 0.00 1304 reject_low 20 ALIGNMENT 1033 YS2-10i02.p1k chr12 38 1253 517174 518404 F 1216 95.81 1273 accept 0 ALIGNMENT 993 YS2-10i02.q1k chr12 1277 43 520096 521359 C 1235 95.38 1277 accept 0 ALIGNMENT 233 YS2-10i04.p1k chr07 35 293 197748 198005 F 259 98.46 311 accept_chi 1 ALIGNMENT 0 YS2-10i04.q1k vc_3 298 62 2513 2512 C 237 0.00 339 reject_low 5 ALIGNMENT 0 YS2-10i04.q1k chr07 339 299 197745 197744 C 41 0.00 339 accept_chi 0 ALIGNMENT 0 YS2-10i04.q1k vc_1 298 62 2513 2512 C 237 0.00 339 reject_low 3 ALIGNMENT 238 YS2-10i04.q1k chr07 298 36 197744 198005 C 263 98.48 339 accept_chi 0 ALIGNMENT 0 YS2-10i04.q1k vc_4 62 298 5831 5830 F 237 0.00 339 reject_low 6 ALIGNMENT 41 YS2-10i04.q1k vc_4 299 339 5831 5871 F 41 100.00 339 reject_low 6 ALIGNMENT 40 YS2-10i04.q1k vc_5 339 294 5025 5070 C 46 95.65 339 reject_low 2 ALIGNMENT 37 YS2-10i04.q1k vc_5 336 294 1 43 C 43 95.35 339 reject_low 7 ALIGNMENT 41 YS2-10i04.q1k vc_3 339 299 2472 2512 C 41 100.00 339 reject_low 5 ALIGNMENT 0 YS2-10i04.q1k vc_5 293 62 44 43 C 232 0.00 339 reject_low 7 ALIGNMENT 41 YS2-10i04.q1k vc_2 339 299 2105 2145 C 41 100.00 339 reject_low 4 ALIGNMENT 0 YS2-10i04.q1k vc_2 298 62 2146 2145 C 237 0.00 339 reject_low 4 ALIGNMENT 0 YS2-10i04.p1k chr07 294 311 198005 198004 F 18 0.00 311 accept_chi 1 ALIGNMENT 0 YS2-10i04.q1k vc_7 62 301 13525 13524 F 240 0.00 339 reject_low 8 ALIGNMENT 0 YS2-10i04.q1k vc_5 293 62 5071 5070 C 232 0.00 339 reject_low 2 ALIGNMENT 41 YS2-10i04.q1k vc_1 339 299 2472 2512 C 41 100.00 339 reject_low 3 ALIGNMENT 38 YS2-10i04.q1k vc_7 302 339 13525 13562 F 38 100.00 339 reject_low 8 ALIGNMENT 945 YS2-10i05.p1k chr04 29 1112 63880 64982 F 1084 97.05 1287 accept 0 ALIGNMENT 1030 YS2-10i05.q1k chr04 1214 39 68092 69283 C 1176 96.34 1316 accept 0 ALIGNMENT 968 YS2-10i06.q1k chr14 40 1212 635213 636404 F 1173 96.33 1333 accept 0 ALIGNMENT 992 YS2-10i06.p1k chr14 1211 33 638553 639739 C 1179 95.00 1317 accept 0 ALIGNMENT 953 YS2-10i07.p1k chr12 28 1063 231863 232910 F 1036 98.07 1292 accept 0 ALIGNMENT 0 YS2-10i07.p1k chr12 545 62 412425 412424 C 484 0.00 1292 reject_low 1 ALIGNMENT 991 YS2-10i07.q1k chr12 1189 38 235814 236991 C 1152 96.61 1316 accept 0 ALIGNMENT 255 YS2-10i07.p1k chr12 977 546 411992 412424 C 432 86.81 1292 reject_low 1 ALIGNMENT 0 YS2-10i08.p1k chr12 547 62 412425 412424 C 486 0.00 1379 reject_low 1 ALIGNMENT 306 YS2-10i08.p1k chr12 1157 548 411822 412424 C 610 84.26 1379 reject_low 1 ALIGNMENT 1011 YS2-10i08.q1k chr12 1182 39 235840 236991 C 1144 97.38 1337 accept 0 ALIGNMENT 1064 YS2-10i08.p1k chr12 29 1251 231863 233083 F 1223 95.83 1379 accept 0 ALIGNMENT 0 YS2-10i09.q1k chr09 111 898 370505 370504 F 788 0.00 1313 reject_low 2 ALIGNMENT 32 YS2-10i09.q1k chr09 51 110 370448 370505 F 60 88.33 1313 reject_low 2 ALIGNMENT 40 YS2-10i09.q1k chr02 51 97 645196 645242 F 47 95.74 1313 reject_low 4 ALIGNMENT 34 YS2-10i09.q1k chr05 51 97 177132 177178 F 47 91.49 1313 reject_low 6 ALIGNMENT 37 YS2-10i09.q1k chr10 99 51 115924 115971 C 49 93.88 1313 reject_low 5 ALIGNMENT 33 YS2-10i09.q1k chr11 106 51 141006 141060 C 56 89.29 1313 reject_low 3 ALIGNMENT 0 YS2-10i09.q1k chr04 898 101 1017189 1017188 C 798 0.00 1313 reject_low 1 ALIGNMENT 965 YS2-10i09.q1k chr09 50 1097 197622 198679 F 1048 98.00 1313 accept 0 ALIGNMENT 988 YS2-10i09.p1k chr09 1248 34 202317 203549 C 1215 94.32 1405 accept 0 ALIGNMENT 34 YS2-10i09.q1k chr07 51 94 328620 328663 F 44 93.18 1313 reject_low 7 ALIGNMENT 0 YS2-10i09.q1k chr10 898 100 115925 115924 C 799 0.00 1313 reject_low 5 ALIGNMENT 0 YS2-10i09.q1k chr07 95 898 328663 328662 F 804 0.00 1313 reject_low 7 ALIGNMENT 43 YS2-10i09.q1k chr04 100 50 1017188 1017239 C 51 96.08 1313 reject_low 1 ALIGNMENT 0 YS2-10i09.q1k chr02 98 898 645242 645241 F 801 0.00 1313 reject_low 4 ALIGNMENT 0 YS2-10i09.q1k chr05 98 898 177178 177177 F 801 0.00 1313 reject_low 6 ALIGNMENT 0 YS2-10i09.q1k chr11 898 107 141007 141006 C 792 0.00 1313 reject_low 3 ALIGNMENT 0 YS2-10i10.q1k chr09 530 62 105828 105827 C 469 0.00 1312 reject_low 2 ALIGNMENT 21 YS2-10i10.q1k chr09 570 531 105788 105827 C 40 100.00 1312 reject_low 2 ALIGNMENT 0 YS2-10i10.q1k chr10 866 571 470056 470055 C 296 0.00 1312 reject_low 1 ALIGNMENT 0 YS2-10i10.q1k chr10 527 62 470098 470097 C 466 0.00 1312 reject_low 1 ALIGNMENT 24 YS2-10i10.q1k chr10 570 528 470055 470097 C 43 97.67 1312 reject_low 1 ALIGNMENT 891 YS2-10i10.p1k chr15 1053 31 633116 634148 C 1023 97.36 1299 accept 0 ALIGNMENT 0 YS2-10i10.q1k chr09 866 571 105789 105788 C 296 0.00 1312 reject_low 2 ALIGNMENT 959 YS2-10i10.q1k chr15 29 1191 629989 631154 F 1163 96.13 1312 accept 0 ALIGNMENT 67 YS2-10i11.p1k vc_7 282 553 13562 13830 F 272 76.10 1391 reject_low 1 ALIGNMENT 0 YS2-10i11.p1k chr09 264 304 125470 125469 F 41 0.00 1391 accept 0 ALIGNMENT 166 YS2-10i11.p1k chr09 38 263 125246 125470 F 226 91.59 1391 accept 0 ALIGNMENT 0 YS2-10i11.p1k vc_7 192 281 13562 13561 F 90 0.00 1391 reject_low 1 ALIGNMENT 1008 YS2-10i15.q1k chr15 1150 48 801594 802705 C 1103 97.28 1376 accept 0 ALIGNMENT 971 YS2-10i15.p1k chr15 33 1203 797809 798991 F 1171 95.56 1338 accept 0 ALIGNMENT 1007 YS2-10i17.q1k chr14 1148 41 434871 435993 C 1108 97.74 1264 accept 0 ALIGNMENT 994 YS2-10i17.p1k chr14 29 1222 431853 433062 F 1194 95.23 1349 accept 0 ALIGNMENT 1062 YS2-10i19.p1k chr02 1226 30 492004 493206 C 1197 96.91 1313 accept 0 ALIGNMENT 404 YS2-10i19.q1k chr02 112 989 488220 489096 F 878 82.92 1274 accept 0 ALIGNMENT 0 YS2-10i20.q1k vc_2 207 62 2146 2145 C 146 0.00 248 reject_low 3 ALIGNMENT 159 YS2-10i20.q1k chr12 38 208 964412 964582 F 171 98.25 248 accept_chi 1 ALIGNMENT 0 YS2-10i20.q1k vc_5 209 62 37 36 C 148 0.00 248 reject_low 8 ALIGNMENT 0 YS2-10i20.q1k vc_1 207 62 2513 2512 C 146 0.00 248 reject_low 2 ALIGNMENT 0 YS2-10i20.q1k chr12 209 248 964582 964581 F 40 0.00 248 accept_chi 1 ALIGNMENT 41 YS2-10i20.q1k vc_1 248 208 2472 2512 C 41 100.00 248 reject_low 2 ALIGNMENT 36 YS2-10i20.q1k vc_5 245 210 1 36 C 36 100.00 248 reject_low 8 ALIGNMENT 41 YS2-10i20.q1k vc_2 248 208 2105 2145 C 41 100.00 248 reject_low 3 ALIGNMENT 0 YS2-10i20.q1k vc_5 209 62 5064 5063 C 148 0.00 248 reject_low 6 ALIGNMENT 159 YS2-10i20.p1k chr12 201 31 964412 964582 C 171 98.25 219 accept_chi 0 ALIGNMENT 0 YS2-10i20.q1k vc_3 207 62 2513 2512 C 146 0.00 248 reject_low 4 ALIGNMENT 0 YS2-10i20.p1k chr12 219 202 964413 964412 C 18 0.00 219 accept_chi 0 ALIGNMENT 0 YS2-10i20.q1k vc_7 62 210 13525 13524 F 149 0.00 248 reject_low 7 ALIGNMENT 0 YS2-10i20.q1k vc_4 62 207 5831 5830 F 146 0.00 248 reject_low 5 ALIGNMENT 39 YS2-10i20.q1k vc_5 248 210 5025 5063 C 39 100.00 248 reject_low 6 ALIGNMENT 41 YS2-10i20.q1k vc_4 208 248 5831 5871 F 41 100.00 248 reject_low 5 ALIGNMENT 38 YS2-10i20.q1k vc_7 211 248 13525 13562 F 38 100.00 248 reject_low 7 ALIGNMENT 41 YS2-10i20.q1k vc_3 248 208 2472 2512 C 41 100.00 248 reject_low 4 ALIGNMENT 414 YS2-10i21.q1k chr12 987 51 457065 458006 C 937 82.28 1200 accept 0 ALIGNMENT 377 YS2-10i21.q1k chr12 1058 268 466127 466924 C 791 83.57 1200 reject_low 1 ALIGNMENT 1068 YS2-10i21.p1k chr12 29 1270 463342 464583 F 1242 95.65 1272 reject_low 1 ALIGNMENT 1068 YS2-10i21.p1k chr12 29 1270 454205 455446 F 1242 95.65 1272 accept 0 ALIGNMENT 1075 YS2-10i22.p1k chr01 32 1243 105871 107089 F 1212 96.78 1266 accept 0 ALIGNMENT 1070 YS2-10i22.q1k chr01 1248 28 106784 108017 C 1221 96.64 1258 accept 0 ALIGNMENT 965 YS2-10i23.q1k chr04 40 1197 82190 83338 F 1158 96.03 1237 accept 0 ALIGNMENT 1056 YS2-10i23.p1k chr04 1256 37 87088 88309 C 1220 96.48 1256 accept 0 ALIGNMENT 179 YS2-10j01.p1k chr05 33 213 181907 182087 F 181 100.00 232 accept 0 ALIGNMENT 0 YS2-10j01.p1k chr05 214 232 182087 182086 F 19 0.00 232 accept 0 ALIGNMENT 549 YS2-10j02.q1k chr14 28 684 297198 297860 F 657 95.89 1371 accept 0 ALIGNMENT 1010 YS2-10j02.p1k chr14 1222 31 300797 302007 C 1192 95.81 1254 accept 0 ALIGNMENT 555 YS2-10j03.q1k chr09 40 762 366446 367188 F 723 92.95 957 accept 0 ALIGNMENT 0 YS2-10j03.p1k chr09 841 176 197588 197587 C 666 0.00 1254 reject_low 3 ALIGNMENT 0 YS2-10j03.p1k chr05 177 841 487400 487399 F 665 0.00 1254 reject_low 8 ALIGNMENT 78 YS2-10j03.p1k chr05 180 100 354923 355003 C 81 98.77 1254 reject_low 6 ALIGNMENT 0 YS2-10j03.p1k chr16 181 841 210269 210268 F 661 0.00 1254 reject_low 10 ALIGNMENT 0 YS2-10j03.p1k chr07 841 181 328580 328579 C 661 0.00 1254 reject_low 9 ALIGNMENT 76 YS2-10j03.p1k chr07 182 101 541845 541926 C 82 97.56 1254 reject_low 5 ALIGNMENT 0 YS2-10j03.p1k chr05 99 62 177172 177171 C 38 0.00 1254 reject_low 14 ALIGNMENT 0 YS2-10j03.p1k chr05 99 62 355004 355003 C 38 0.00 1254 reject_low 6 ALIGNMENT 21 YS2-10j03.p1k chr14 721 748 604237 604264 F 28 100.00 1254 reject_low 1 ALIGNMENT 0 YS2-10j03.p1k chr10 180 841 116011 116010 F 662 0.00 1254 reject_low 4 ALIGNMENT 75 YS2-10j03.p1k chr05 174 100 177097 177171 C 75 100.00 1254 reject_low 14 ALIGNMENT 0 YS2-10j03.p1k chr02 841 180 645157 645156 C 662 0.00 1254 reject_low 11 ALIGNMENT 74 YS2-10j03.p1k chr03 101 174 82460 82533 F 74 100.00 1254 reject_low 15 ALIGNMENT 0 YS2-10j03.p1k chr05 62 98 487323 487322 F 37 0.00 1254 reject_low 8 ALIGNMENT 76 YS2-10j03.p1k chr07 95 173 401523 401601 F 79 98.73 1254 reject_low 7 ALIGNMENT 74 YS2-10j03.p1k chr16 101 180 210190 210269 F 80 97.50 1254 reject_low 10 ALIGNMENT 78 YS2-10j03.p1k chr05 99 176 487323 487400 F 78 100.00 1254 reject_low 8 ALIGNMENT 0 YS2-10j03.p1k chr13 100 62 290873 290872 C 39 0.00 1254 reject_low 12 ALIGNMENT 0 YS2-10j03.p1k chr16 62 100 210190 210189 F 39 0.00 1254 reject_low 10 ALIGNMENT 0 YS2-10j03.p1k chr12 841 174 797179 797178 C 668 0.00 1254 reject_low 2 ALIGNMENT 0 YS2-10j03.p1k chr07 174 841 401601 401600 F 668 0.00 1254 reject_low 7 ALIGNMENT 0 YS2-10j03.p1k chr07 841 183 541846 541845 C 659 0.00 1254 reject_low 5 ALIGNMENT 0 YS2-10j03.p1k chr11 62 100 141022 141021 F 39 0.00 1254 reject_low 13 ALIGNMENT 0 YS2-10j03.p1k chr11 177 841 141097 141096 F 665 0.00 1254 reject_low 13 ALIGNMENT 0 YS2-10j03.p1k chr02 100 62 645235 645234 C 39 0.00 1254 reject_low 11 ALIGNMENT 0 YS2-10j03.p1k chr05 841 181 354924 354923 C 661 0.00 1254 reject_low 6 ALIGNMENT 0 YS2-10j03.p1k chr13 841 179 290796 290795 C 663 0.00 1254 reject_low 12 ALIGNMENT 0 YS2-10j03.p1k chr14 749 841 604264 604263 F 93 0.00 1254 reject_low 1 ALIGNMENT 0 YS2-10j03.p1k chr07 62 94 401523 401522 F 33 0.00 1254 reject_low 7 ALIGNMENT 74 YS2-10j03.p1k chr07 180 101 328579 328658 C 80 97.50 1254 reject_low 9 ALIGNMENT 82 YS2-10j03.p1k chr10 95 179 115927 116011 F 85 98.82 1254 reject_low 4 ALIGNMENT 0 YS2-10j03.p1k chr10 62 94 115927 115926 F 33 0.00 1254 reject_low 4 ALIGNMENT 74 YS2-10j03.p1k chr12 173 83 797178 797269 C 91 94.51 1254 reject_low 2 ALIGNMENT 0 YS2-10j03.p1k chr05 841 175 177098 177097 C 667 0.00 1254 reject_low 14 ALIGNMENT 903 YS2-10j03.p1k chr09 1111 33 369451 370554 C 1079 95.46 1254 accept 0 ALIGNMENT 0 YS2-10j03.p1k chr07 100 62 328659 328658 C 39 0.00 1254 reject_low 9 ALIGNMENT 0 YS2-10j03.p1k chr03 62 100 82460 82459 F 39 0.00 1254 reject_low 15 ALIGNMENT 0 YS2-10j03.p1k chr12 82 62 797270 797269 C 21 0.00 1254 reject_low 2 ALIGNMENT 76 YS2-10j03.p1k chr11 101 176 141022 141097 F 76 100.00 1254 reject_low 13 ALIGNMENT 0 YS2-10j03.p1k chr09 81 62 197683 197682 C 20 0.00 1254 reject_low 3 ALIGNMENT 0 YS2-10j03.p1k chr03 175 841 82533 82532 F 667 0.00 1254 reject_low 15 ALIGNMENT 76 YS2-10j03.p1k chr02 179 101 645156 645234 C 79 98.73 1254 reject_low 11 ALIGNMENT 0 YS2-10j03.p1k chr07 100 62 541927 541926 C 39 0.00 1254 reject_low 5 ALIGNMENT 0 YS2-10j03.p1k chr14 62 720 604237 604236 F 659 0.00 1254 reject_low 1 ALIGNMENT 75 YS2-10j03.p1k chr13 178 101 290795 290872 C 78 98.72 1254 reject_low 12 ALIGNMENT 61 YS2-10j03.p1k chr09 175 82 197587 197682 C 94 89.36 1254 reject_low 3 ALIGNMENT 136 YS2-10j05.p1k vc_7 954 1191 100 348 F 238 87.82 1319 reject_low 6 ALIGNMENT 26 YS2-10j05.p1k vc_3 984 954 2441 2472 C 31 96.77 1319 reject_low 9 ALIGNMENT 136 YS2-10j05.p1k vc_1 1191 954 1857 2105 C 238 87.82 1319 reject_low 1 ALIGNMENT 869 YS2-10j05.p1k chr02 936 32 435722 436626 C 905 99.78 1319 accept 0 ALIGNMENT 136 YS2-10j05.p1k vc_3 1191 954 1857 2105 C 238 87.82 1319 reject_low 3 ALIGNMENT 136 YS2-10j05.p1k vc_7 954 1191 13562 13810 F 238 87.82 1319 reject_low 7 ALIGNMENT 26 YS2-10j05.p1k vc_1 984 954 2441 2472 C 31 96.77 1319 reject_low 8 ALIGNMENT 0 YS2-10j05.p1k vc_2 953 62 2106 2105 C 892 0.00 1319 reject_low 2 ALIGNMENT 136 YS2-10j05.p1k vc_2 1191 954 1857 2105 C 238 87.82 1319 reject_low 2 ALIGNMENT 0 YS2-10j05.p1k vc_4 62 953 5871 5870 F 892 0.00 1319 reject_low 4 ALIGNMENT 0 YS2-10j05.p1k vc_3 953 62 2473 2472 C 892 0.00 1319 reject_low 9 ALIGNMENT 0 YS2-10j05.p1k vc_1 953 62 2473 2472 C 892 0.00 1319 reject_low 8 ALIGNMENT 0 YS2-10j05.p1k vc_7 62 953 13562 13561 F 892 0.00 1319 reject_low 7 ALIGNMENT 136 YS2-10j05.p1k vc_5 1191 954 4777 5025 C 238 87.82 1319 reject_low 5 ALIGNMENT 0 YS2-10j05.p1k vc_1 953 62 2106 2105 C 892 0.00 1319 reject_low 1 ALIGNMENT 136 YS2-10j05.p1k vc_4 954 1191 5871 6119 F 238 87.82 1319 reject_low 4 ALIGNMENT 0 YS2-10j05.p1k vc_3 953 62 2106 2105 C 892 0.00 1319 reject_low 3 ALIGNMENT 0 YS2-10j05.p1k vc_5 953 62 5026 5025 C 892 0.00 1319 reject_low 5 ALIGNMENT 0 YS2-10j05.p1k vc_7 62 953 100 99 F 892 0.00 1319 reject_low 6 ALIGNMENT 430 YS2-10j06.p1k vc_5 605 1 4060 4669 C 605 90.74 691 reject_vc 0 ALIGNMENT 421 YS2-10j06.p1k vc_7 1 605 13918 14527 F 605 90.25 691 reject_vc 6 ALIGNMENT 427 YS2-10j06.p1k vc_3 605 1 1140 1749 C 605 90.58 691 reject_vc 4 ALIGNMENT 427 YS2-10j06.p1k vc_1 605 1 1140 1749 C 605 90.58 691 reject_vc 2 ALIGNMENT 421 YS2-10j06.p1k vc_7 1 605 456 1065 F 605 90.25 691 reject_vc 5 ALIGNMENT 427 YS2-10j06.p1k vc_2 605 1 1140 1749 C 605 90.58 691 reject_vc 3 ALIGNMENT 430 YS2-10j06.p1k vc_6 1 605 3712 4321 F 605 90.74 691 reject_vc 1 ALIGNMENT 0 YS2-10j07.q1k chr12 536 495 217969 217968 C 42 0.00 1382 reject_low 18 ALIGNMENT 0 YS2-10j07.p1k chr03 857 537 127707 127706 C 321 0.00 1323 reject_low 25 ALIGNMENT 0 YS2-10j07.p1k chr15 62 744 975942 975941 F 683 0.00 1323 reject_low 56 ALIGNMENT 0 YS2-10j07.p1k chr04 876 62 981497 981496 C 815 0.00 1323 reject_low 28 ALIGNMENT 121 YS2-10j07.p1k chr05 1131 877 449351 449626 C 255 86.67 1323 reject_low 36 ALIGNMENT 0 YS2-10j07.p1k chr10 857 794 355011 355010 C 64 0.00 1323 reject_low 57 ALIGNMENT 76 YS2-10j07.p1k chr16 530 449 810672 810753 C 82 97.56 1323 reject_low 60 ALIGNMENT 0 YS2-10j07.p1k chr06 794 857 143616 143615 F 64 0.00 1323 reject_low 59 ALIGNMENT 125 YS2-10j07.p1k chr04 1169 877 981176 981496 C 293 85.67 1323 reject_low 28 ALIGNMENT 0 YS2-10j07.p1k chr03 879 62 85139 85138 C 818 0.00 1323 reject_low 41 ALIGNMENT 0 YS2-10j07.p1k chr02 876 62 9425 9424 C 815 0.00 1323 reject_low 30 ALIGNMENT 167 YS2-10j07.q1k chr07 494 43 820279 820730 C 452 79.87 1382 reject_low 13 ALIGNMENT 27 YS2-10j07.p1k chr02 745 808 35301 35364 F 64 84.38 1323 reject_low 45 ALIGNMENT 81 YS2-10j07.p1k chr11 531 448 74628 74711 C 84 98.81 1323 reject_low 29 ALIGNMENT 82 YS2-10j07.p1k chr15 531 447 487439 487523 C 85 98.82 1323 reject_low 26 ALIGNMENT 27 YS2-10j07.p1k chr04 745 793 981198 981246 F 49 87.76 1323 reject_low 51 ALIGNMENT 0 YS2-10j07.q1k chr12 536 495 478862 478861 C 42 0.00 1382 reject_low 19 ALIGNMENT 124 YS2-10j07.p1k chr04 1119 877 1352705 1352965 C 243 87.65 1323 reject_low 34 ALIGNMENT 40 YS2-10j07.p1k chr03 1169 1008 84079 84264 C 162 81.48 1323 reject_low 58 ALIGNMENT 0 YS2-10j07.p1k chr05 876 62 449627 449626 C 815 0.00 1323 reject_low 36 ALIGNMENT 0 YS2-10j07.p1k chr07 453 62 731219 731218 C 392 0.00 1323 reject_low 27 ALIGNMENT 0 YS2-10j07.p1k chr06 875 62 143868 143867 C 814 0.00 1323 reject_low 2 ALIGNMENT 0 YS2-10j07.q1k chr13 495 536 199369 199368 F 42 0.00 1382 reject_low 21 ALIGNMENT 27 YS2-10j07.p1k chr04 745 793 986825 986873 F 49 87.76 1323 reject_low 52 ALIGNMENT 0 YS2-10j07.p1k chr07 876 62 811784 811783 C 815 0.00 1323 reject_low 38 ALIGNMENT 0 YS2-10j07.p1k chr07 857 535 731139 731138 C 323 0.00 1323 reject_low 27 ALIGNMENT 0 YS2-10j07.p1k chr10 876 62 538349 538348 C 815 0.00 1323 reject_low 35 ALIGNMENT 473 YS2-10j07.q1k chr07 43 544 814021 814522 F 502 99.00 1382 reject_low 7 ALIGNMENT 0 YS2-10j07.p1k chr05 794 857 487910 487909 F 64 0.00 1323 reject_low 54 ALIGNMENT 113 YS2-10j07.p1k chr07 1169 877 811463 811783 C 293 84.64 1323 reject_low 38 ALIGNMENT 122 YS2-10j07.p1k chr15 1169 877 975920 976240 C 293 85.32 1323 reject_low 3 ALIGNMENT 27 YS2-10j07.p1k chr02 745 793 9126 9174 F 49 87.76 1323 reject_low 46 ALIGNMENT 0 YS2-10j07.p1k chr05 744 62 135907 135906 C 683 0.00 1323 reject_low 53 ALIGNMENT 24 YS2-10j07.p1k chr10 793 745 355010 355058 C 49 85.71 1323 reject_low 57 ALIGNMENT 473 YS2-10j07.q1k chr15 544 43 706953 707454 C 502 99.00 1382 reject_low 8 ALIGNMENT 0 YS2-10j07.p1k chr16 857 794 810478 810477 C 64 0.00 1323 reject_low 60 ALIGNMENT 0 YS2-10j07.p1k chr04 820 857 1353029 1353028 F 38 0.00 1323 reject_low 24 ALIGNMENT 0 YS2-10j07.p1k chr04 794 857 981246 981245 F 64 0.00 1323 reject_low 51 ALIGNMENT 0 YS2-10j07.p1k chr16 755 531 810515 810671 C 225 0.00 1323 reject_low 60 ALIGNMENT 82 YS2-10j07.p1k chr03 536 448 127706 127795 C 89 97.75 1323 reject_low 25 ALIGNMENT 476 YS2-10j07.q1k chr14 544 43 564922 565423 C 502 99.20 1382 reject_low 6 ALIGNMENT 102 YS2-10j07.p1k chr03 1169 882 84305 84620 C 288 83.33 1323 reject_low 43 ALIGNMENT 0 YS2-10j07.p1k chr06 531 744 137555 143567 F 214 0.00 1323 reject_low 59 ALIGNMENT 0 YS2-10j07.p1k chr06 876 62 138240 138239 C 815 0.00 1323 reject_low 42 ALIGNMENT 0 YS2-10j07.p1k chr02 876 62 29973 29972 C 815 0.00 1323 reject_low 40 ALIGNMENT 27 YS2-10j07.p1k chr15 745 793 975942 975990 F 49 87.76 1323 reject_low 56 ALIGNMENT 0 YS2-10j07.p1k chr03 879 62 90766 90765 C 818 0.00 1323 reject_low 4 ALIGNMENT 467 YS2-10j07.q1k chr04 544 43 516573 517074 C 502 98.61 1382 reject_low 11 ALIGNMENT 0 YS2-10j07.p1k chr03 1007 62 84265 84264 C 946 0.00 1323 reject_low 58 ALIGNMENT 0 YS2-10j07.p1k chr11 447 62 74712 74711 C 386 0.00 1323 reject_low 29 ALIGNMENT 0 YS2-10j07.p1k chr15 857 532 487440 487439 C 326 0.00 1323 reject_low 26 ALIGNMENT 0 YS2-10j07.p1k chr04 876 62 987124 987123 C 815 0.00 1323 reject_low 1 ALIGNMENT 151 YS2-10j07.q1k chr10 43 415 480548 480920 F 373 80.97 1382 reject_low 22 ALIGNMENT 170 YS2-10j07.q1k chr16 494 43 807524 807975 C 452 80.09 1382 reject_low 16 ALIGNMENT 170 YS2-10j07.q1k chr10 43 494 474964 475415 F 452 80.09 1382 reject_low 15 ALIGNMENT 0 YS2-10j07.p1k chr04 794 857 986873 986872 F 64 0.00 1323 reject_low 52 ALIGNMENT 470 YS2-10j07.q1k chr03 43 544 87379 87880 F 502 98.80 1382 reject_low 4 ALIGNMENT 0 YS2-10j07.p1k chr03 794 857 84375 84374 F 64 0.00 1323 reject_low 48 ALIGNMENT 0 YS2-10j07.q1k chr07 536 495 820280 820279 C 42 0.00 1382 reject_low 13 ALIGNMENT 167 YS2-10j07.q1k chr12 494 43 478861 479312 C 452 79.87 1382 reject_low 19 ALIGNMENT 0 YS2-10j07.p1k chr10 62 744 538050 538049 F 683 0.00 1323 reject_low 55 ALIGNMENT 0 YS2-10j07.p1k chr04 62 744 986825 986824 F 683 0.00 1323 reject_low 52 ALIGNMENT 0 YS2-10j07.p1k chr07 62 744 811485 811484 F 683 0.00 1323 reject_low 13 ALIGNMENT 0 YS2-10j07.p1k chr15 722 539 228165 228320 C 184 0.00 1323 reject_low 37 ALIGNMENT 0 YS2-10j07.p1k chr03 62 744 84843 84842 F 683 0.00 1323 reject_low 49 ALIGNMENT 27 YS2-10j07.p1k chr10 745 793 538050 538098 F 49 87.76 1323 reject_low 55 ALIGNMENT 81 YS2-10j07.p1k chr07 534 454 731138 731218 C 81 100.00 1323 reject_low 27 ALIGNMENT 116 YS2-10j07.p1k chr10 1169 877 538028 538348 C 293 84.64 1323 reject_low 35 ALIGNMENT 118 YS2-10j07.p1k chr02 1086 877 29751 29972 C 210 89.05 1323 reject_low 40 ALIGNMENT 27 YS2-10j07.p1k chr05 745 793 487862 487910 F 49 87.76 1323 reject_low 54 ALIGNMENT 122 YS2-10j07.p1k chr02 1169 877 9104 9424 C 293 85.32 1323 reject_low 30 ALIGNMENT 27 YS2-10j07.p1k chr03 745 793 84327 84375 F 49 87.76 1323 reject_low 48 ALIGNMENT 0 YS2-10j07.q1k chr13 495 536 187202 187201 F 42 0.00 1382 reject_low 20 ALIGNMENT 89 YS2-10j07.p1k chr14 532 440 102714 102806 C 93 98.92 1323 reject_low 23 ALIGNMENT 0 YS2-10j07.p1k chr07 794 857 811533 811532 F 64 0.00 1323 reject_low 13 ALIGNMENT 0 YS2-10j07.q1k chr16 495 536 847449 847448 F 42 0.00 1382 reject_low 17 ALIGNMENT 80 YS2-10j07.p1k chr15 538 448 228321 228410 C 91 96.70 1323 reject_low 37 ALIGNMENT 0 YS2-10j07.p1k chr03 447 62 127796 127795 C 386 0.00 1323 reject_low 25 ALIGNMENT 109 YS2-10j07.p1k chr10 876 1169 354759 355080 F 294 83.67 1323 reject_low 39 ALIGNMENT 0 YS2-10j07.p1k chr14 439 62 102807 102806 C 378 0.00 1323 reject_low 23 ALIGNMENT 0 YS2-10j07.q1k chr02 495 536 224074 224073 F 42 0.00 1382 reject_low 14 ALIGNMENT 467 YS2-10j07.q1k chr02 43 544 32210 32711 F 502 98.61 1382 reject_low 5 ALIGNMENT 0 YS2-10j07.p1k chr02 62 744 35301 35300 F 683 0.00 1323 reject_low 45 ALIGNMENT 0 YS2-10j07.p1k chr04 62 744 981198 981197 F 683 0.00 1323 reject_low 51 ALIGNMENT 467 YS2-10j07.q1k chr12 43 544 943758 944259 F 502 98.61 1382 reject_low 12 ALIGNMENT 0 YS2-10j07.p1k chr14 448 62 632683 632682 C 387 0.00 1323 reject_low 33 ALIGNMENT 113 YS2-10j07.p1k chr03 1169 880 90448 90765 C 290 84.48 1323 reject_low 4 ALIGNMENT 0 YS2-10j07.p1k chr12 732 876 976254 976253 F 145 0.00 1323 accept_trans 0 ALIGNMENT 0 YS2-10j07.p1k chr05 62 744 487862 487861 F 683 0.00 1323 reject_low 54 ALIGNMENT 0 YS2-10j07.p1k chr05 62 879 135611 135610 F 818 0.00 1323 reject_low 32 ALIGNMENT 27 YS2-10j07.p1k chr03 745 793 84843 84891 F 49 87.76 1323 reject_low 49 ALIGNMENT 470 YS2-10j07.q1k chr04 43 544 874385 874886 F 502 98.80 1382 reject_low 10 ALIGNMENT 0 YS2-10j07.p1k chr03 794 857 90518 90517 F 64 0.00 1323 reject_low 50 ALIGNMENT 0 YS2-10j07.p1k chr03 62 744 84101 84100 F 683 0.00 1323 reject_low 47 ALIGNMENT 0 YS2-10j07.q1k chr10 495 536 475415 475414 F 42 0.00 1382 reject_low 15 ALIGNMENT 0 YS2-10j07.p1k chr14 857 533 102715 102714 C 325 0.00 1323 reject_low 23 ALIGNMENT 472 YS2-10j07.q1k chr07 544 43 571633 572135 C 502 99.00 1382 reject_low 9 ALIGNMENT 31 YS2-10j07.p1k chr04 756 819 1352966 1353029 F 64 85.94 1323 reject_low 24 ALIGNMENT 0 YS2-10j07.q1k chr10 416 536 480920 480919 F 121 0.00 1382 reject_low 22 ALIGNMENT 0 YS2-10j07.p1k chr15 446 62 487524 487523 C 385 0.00 1323 reject_low 26 ALIGNMENT 122 YS2-10j07.p1k chr05 1169 877 487840 488160 C 293 85.32 1323 reject_low 31 ALIGNMENT 170 YS2-10j07.q1k chr16 43 494 846998 847449 F 452 80.09 1382 reject_low 17 ALIGNMENT 125 YS2-10j07.p1k chr04 1169 877 986803 987123 C 293 85.67 1323 reject_low 1 ALIGNMENT 0 YS2-10j07.p1k chr10 794 857 538098 538097 F 64 0.00 1323 reject_low 55 ALIGNMENT 167 YS2-10j07.q1k chr13 43 494 198918 199369 F 452 79.87 1382 reject_low 21 ALIGNMENT 470 YS2-10j07.q1k chr04 43 544 983734 984235 F 502 98.80 1382 reject_low 1 ALIGNMENT 0 YS2-10j07.p1k chr15 857 810 228079 228078 C 48 0.00 1323 reject_low 37 ALIGNMENT 0 YS2-10j07.p1k chr16 448 62 810754 810753 C 387 0.00 1323 reject_low 60 ALIGNMENT 0 YS2-10j07.p1k chr04 62 755 1352966 1352965 F 694 0.00 1323 reject_low 24 ALIGNMENT 0 YS2-10j07.p1k chr06 62 449 137474 137473 F 388 0.00 1323 reject_low 59 ALIGNMENT 0 YS2-10j07.p1k chr14 857 531 632602 632601 C 327 0.00 1323 reject_low 33 ALIGNMENT 0 YS2-10j07.p1k chr04 876 62 1352966 1352965 C 815 0.00 1323 reject_low 34 ALIGNMENT 0 YS2-10j07.p1k chr03 62 744 84327 84326 F 683 0.00 1323 reject_low 48 ALIGNMENT 27 YS2-10j07.p1k chr03 745 793 90470 90518 F 49 87.76 1323 reject_low 50 ALIGNMENT 27 YS2-10j07.p1k chr02 745 808 29674 29737 F 64 84.38 1323 reject_low 44 ALIGNMENT 79 YS2-10j07.p1k chr14 530 449 632601 632682 C 82 98.78 1323 reject_low 33 ALIGNMENT 49 YS2-10j07.p1k chr15 809 723 228078 228164 C 87 88.51 1323 reject_low 37 ALIGNMENT 122 YS2-10j07.p1k chr05 880 1169 135611 135928 F 290 85.52 1323 reject_low 32 ALIGNMENT 473 YS2-10j07.q1k chr06 43 544 140477 140978 F 502 99.00 1382 reject_low 2 ALIGNMENT 0 YS2-10j07.p1k chr03 794 857 84891 84890 F 64 0.00 1323 reject_low 49 ALIGNMENT 0 YS2-10j07.p1k chr02 809 857 35364 35363 F 49 0.00 1323 reject_low 45 ALIGNMENT 0 YS2-10j07.p1k chr10 744 62 355059 355058 C 683 0.00 1323 reject_low 57 ALIGNMENT 469 YS2-10j07.q1k chr12 556 43 978615 979127 C 514 98.25 1382 accept_trans 0 ALIGNMENT 0 YS2-10j07.p1k chr15 876 62 976241 976240 C 815 0.00 1323 reject_low 3 ALIGNMENT 0 YS2-10j07.p1k chr10 62 875 354759 354758 F 814 0.00 1323 reject_low 39 ALIGNMENT 0 YS2-10j07.p1k chr15 447 62 228411 228410 C 386 0.00 1323 reject_low 37 ALIGNMENT 115 YS2-10j07.p1k chr02 1086 877 35378 35599 C 210 88.57 1323 reject_low 5 ALIGNMENT 27 YS2-10j07.p1k chr03 745 793 84101 84149 F 49 87.76 1323 reject_low 47 ALIGNMENT 170 YS2-10j07.q1k chr02 43 494 223623 224074 F 452 80.09 1382 reject_low 14 ALIGNMENT 0 YS2-10j07.p1k chr03 794 857 84149 84148 F 64 0.00 1323 reject_low 47 ALIGNMENT 112 YS2-10j07.p1k chr06 1131 877 137964 138239 C 255 85.88 1323 reject_low 42 ALIGNMENT 0 YS2-10j07.p1k chr02 876 62 35600 35599 C 815 0.00 1323 reject_low 5 ALIGNMENT 0 YS2-10j07.p1k chr15 794 857 975990 975989 F 64 0.00 1323 reject_low 56 ALIGNMENT 27 YS2-10j07.p1k chr16 793 756 810477 810514 C 38 92.11 1323 reject_low 60 ALIGNMENT 27 YS2-10j07.p1k chr07 745 793 811485 811533 F 49 87.76 1323 reject_low 13 ALIGNMENT 102 YS2-10j07.p1k chr12 877 1056 976254 976441 F 180 89.44 1323 accept_trans 0 ALIGNMENT 0 YS2-10j07.p1k chr05 876 62 488161 488160 C 815 0.00 1323 reject_low 31 ALIGNMENT 467 YS2-10j07.q1k chr15 43 544 972851 973352 F 502 98.61 1382 reject_low 3 ALIGNMENT 167 YS2-10j07.q1k chr13 43 494 186751 187202 F 452 79.87 1382 reject_low 20 ALIGNMENT 115 YS2-10j07.p1k chr06 1169 876 143546 143867 C 294 84.69 1323 reject_low 2 ALIGNMENT 0 YS2-10j07.p1k chr03 881 62 84621 84620 C 820 0.00 1323 reject_low 43 ALIGNMENT 0 YS2-10j07.p1k chr02 62 744 29674 29673 F 683 0.00 1323 reject_low 44 ALIGNMENT 0 YS2-10j07.p1k chr05 857 794 135859 135858 C 64 0.00 1323 reject_low 53 ALIGNMENT 0 YS2-10j07.p1k chr02 794 857 9174 9173 F 64 0.00 1323 reject_low 46 ALIGNMENT 0 YS2-10j07.p1k chr02 62 744 9126 9125 F 683 0.00 1323 reject_low 46 ALIGNMENT 27 YS2-10j07.p1k chr05 793 745 135858 135906 C 49 87.76 1323 reject_low 53 ALIGNMENT 0 YS2-10j07.q1k chr16 536 495 807525 807524 C 42 0.00 1382 reject_low 16 ALIGNMENT 167 YS2-10j07.q1k chr12 494 43 217968 218419 C 452 79.87 1382 reject_low 18 ALIGNMENT 0 YS2-10j07.p1k chr11 857 532 74629 74628 C 326 0.00 1323 reject_low 29 ALIGNMENT 0 YS2-10j07.p1k chr02 809 857 29737 29736 F 49 0.00 1323 reject_low 44 ALIGNMENT 0 YS2-10j07.p1k chr03 62 744 90470 90469 F 683 0.00 1323 reject_low 50 ALIGNMENT 27 YS2-10j07.p1k chr06 745 793 143568 143616 F 49 87.76 1323 reject_low 59 ALIGNMENT 78 YS2-10j07.p1k chr06 450 530 137474 137554 F 81 98.77 1323 reject_low 59 ALIGNMENT 107 YS2-10j07.p1k chr03 1169 880 84821 85138 C 290 83.79 1323 reject_low 41 ALIGNMENT 651 YS2-10j07.p1k chr12 35 731 975558 976253 F 697 99.71 1323 accept_trans 0 ALIGNMENT 881 YS2-10j09.q1k chr07 35 1051 867626 868637 F 1017 96.66 1321 accept 0 ALIGNMENT 955 YS2-10j09.p1k chr07 1189 33 870760 871938 C 1157 96.46 1360 accept 0 ALIGNMENT 510 YS2-10j10.p1k chr04 36 827 908336 909119 F 792 89.52 1423 accept 0 ALIGNMENT 0 YS2-10j12.p1k chr16 702 875 187365 187364 F 174 0.00 1316 reject_low 2 ALIGNMENT 587 YS2-10j12.p1k chr16 667 29 818526 819164 C 639 99.37 1316 accept 0 ALIGNMENT 920 YS2-10j12.q1k chr16 28 1141 817343 818456 F 1114 95.96 1380 accept 0 ALIGNMENT 24 YS2-10j12.p1k chr16 651 701 187315 187365 F 51 88.24 1316 reject_low 2 ALIGNMENT 0 YS2-10j12.p1k chr16 668 62 818558 818557 C 607 0.00 1316 reject_low 1 ALIGNMENT 0 YS2-10j12.p1k chr16 62 650 187315 187314 F 589 0.00 1316 reject_low 2 ALIGNMENT 329 YS2-10j12.p1k chr16 1132 669 818081 818557 C 464 93.10 1316 reject_low 1 ALIGNMENT 0 YS2-10j12.p1k chr16 875 668 818527 818526 C 208 0.00 1316 accept 0 ALIGNMENT 426 YS2-10j13.q1k chr02 1079 279 633316 634119 C 801 85.64 1391 accept 0 ALIGNMENT 348 YS2-10j14.p1k scplasm1 1 579 940 1536 F 579 87.39 775 accept 0 ALIGNMENT 932 YS2-10j16.p1k chr16 33 1159 139100 140248 F 1127 96.01 1308 accept 0 ALIGNMENT 904 YS2-10j16.q1k chr16 1065 30 142511 143559 C 1036 96.91 1304 accept 0 ALIGNMENT 762 YS2-10j17.q1k chr08 40 1130 189123 190194 F 1091 91.11 1372 accept 0 ALIGNMENT 368 YS2-10j17.p1k chr08 748 50 12904 13592 C 699 85.98 1423 ambiguous_tel 1 ALIGNMENT 32 YS2-10j17.p1k chr03 959 1075 307376 307490 F 117 77.78 1423 reject_low 2 ALIGNMENT 554 YS2-10j18.p1k chr15 25 633 49103 49711 F 609 98.19 1350 accept 0 ALIGNMENT 825 YS2-10j18.q1k chr15 1178 53 53094 54213 C 1126 93.61 1253 accept 0 ALIGNMENT 26 YS2-10j19.p1k chr09 700 746 433301 433346 F 47 87.23 1246 reject_low 3 ALIGNMENT 0 YS2-10j19.p1k chr11 699 62 2806 2805 C 638 0.00 1246 reject_low 4 ALIGNMENT 854 YS2-10j19.p1k chr08 1035 31 12589 13602 C 1005 96.22 1246 accept 0 ALIGNMENT 62 YS2-10j19.p1k chr12 913 1070 1062490 1062661 F 158 82.91 1246 reject_low 8 ALIGNMENT 0 YS2-10j19.p1k chr07 720 62 7256 7255 C 659 0.00 1246 reject_low 7 ALIGNMENT 0 YS2-10j19.p1k chr09 869 747 9628 9734 C 123 0.00 1246 reject_low 9 ALIGNMENT 0 YS2-10j19.p1k chr09 62 699 433301 433300 F 638 0.00 1246 reject_low 3 ALIGNMENT 944 YS2-10j19.q1k chr08 51 1255 8579 9818 F 1205 93.78 1307 accept 0 ALIGNMENT 21 YS2-10j19.p1k chr12 700 746 1062297 1062341 F 47 85.11 1246 reject_low 8 ALIGNMENT 0 YS2-10j19.p1k chr01 870 766 2638 2726 C 105 0.00 1246 reject_low 5 ALIGNMENT 0 YS2-10j19.p1k chr11 869 747 2654 2760 C 123 0.00 1246 reject_low 4 ALIGNMENT 0 YS2-10j19.p1k chr01 715 62 2776 2775 C 654 0.00 1246 reject_low 5 ALIGNMENT 74 YS2-10j19.p1k chr09 1083 870 9394 9627 C 214 81.31 1246 reject_low 9 ALIGNMENT 24 YS2-10j19.p1k chr01 765 716 2727 2775 C 50 84.00 1246 reject_low 5 ALIGNMENT 0 YS2-10j19.p1k chr09 491 62 10009 10008 C 430 0.00 1246 reject_low 9 ALIGNMENT 0 YS2-10j19.p1k chr09 699 572 9780 9925 C 128 0.00 1246 reject_low 9 ALIGNMENT 111 YS2-10j19.p1k chr12 1050 716 13725 14072 C 335 79.40 1246 reject_low 1 ALIGNMENT 0 YS2-10j19.p1k chr09 747 869 433347 433453 F 123 0.00 1246 reject_low 3 ALIGNMENT 0 YS2-10j19.p1k chr12 62 699 1062297 1062296 F 638 0.00 1246 reject_low 8 ALIGNMENT 21 YS2-10j19.p1k chr03 700 746 307170 307214 F 47 85.11 1246 reject_low 6 ALIGNMENT 74 YS2-10j19.p1k chr10 1083 870 9377 9610 C 214 81.31 1246 reject_low 2 ALIGNMENT 0 YS2-10j19.p1k chr03 747 870 307215 307322 F 124 0.00 1246 reject_low 6 ALIGNMENT 0 YS2-10j19.p1k chr03 62 699 307170 307169 F 638 0.00 1246 reject_low 6 ALIGNMENT 21 YS2-10j19.p1k chr11 746 700 2761 2805 C 47 85.11 1246 reject_low 4 ALIGNMENT 24 YS2-10j19.p1k chr09 571 492 9926 10008 C 80 80.00 1246 reject_low 9 ALIGNMENT 63 YS2-10j19.p1k chr03 871 1070 307323 307541 F 200 79.50 1246 reject_low 6 ALIGNMENT 21 YS2-10j19.p1k chr10 746 700 9718 9762 C 47 85.11 1246 reject_low 2 ALIGNMENT 0 YS2-10j19.p1k chr10 699 62 9763 9762 C 638 0.00 1246 reject_low 2 ALIGNMENT 76 YS2-10j19.p1k chr11 1070 870 2437 2653 C 201 82.09 1246 reject_low 4 ALIGNMENT 72 YS2-10j19.p1k chr07 1070 895 6907 7098 C 176 82.95 1246 reject_low 7 ALIGNMENT 21 YS2-10j19.p1k chr09 746 700 9735 9779 C 47 85.11 1246 reject_low 9 ALIGNMENT 21 YS2-10j19.p1k chr07 746 721 7231 7255 C 26 96.15 1246 reject_low 7 ALIGNMENT 0 YS2-10j19.p1k chr12 747 912 1062342 1062489 F 166 0.00 1246 reject_low 8 ALIGNMENT 61 YS2-10j19.p1k chr01 1070 871 2421 2637 C 200 79.50 1246 reject_low 5 ALIGNMENT 76 YS2-10j19.p1k chr09 870 1070 433454 433670 F 201 81.59 1246 reject_low 3 ALIGNMENT 0 YS2-10j19.p1k chr07 894 747 7099 7230 C 148 0.00 1246 reject_low 7 ALIGNMENT 0 YS2-10j19.p1k chr10 869 747 9611 9717 C 123 0.00 1246 reject_low 2 ALIGNMENT 0 YS2-10j19.p1k chr12 715 62 14073 14072 C 654 0.00 1246 reject_low 1 ALIGNMENT 422 YS2-10j21.p1k chr15 830 8 170770 171570 C 823 86.15 1216 accept 0 ALIGNMENT 346 YS2-10j22.q1k chr15 503 39 394489 394960 C 465 92.90 1385 accept 0 ALIGNMENT 957 YS2-10j22.p1k chr15 31 1091 393904 394961 F 1061 97.93 1295 accept 0 ALIGNMENT 887 YS2-10j23.q1k chr15 42 1051 166253 167255 F 1010 97.13 1145 accept 0 ALIGNMENT 1100 YS2-10j23.p1k chr15 1241 29 170411 171630 C 1213 97.53 1252 accept 0 ALIGNMENT 0 YS2-10k01.q1k vc_2 459 62 2146 2145 C 398 0.00 500 reject_low 3 ALIGNMENT 403 YS2-10k01.p1k chr16 30 448 785216 785635 F 419 99.76 467 accept_chi 1 ALIGNMENT 408 YS2-10k01.q1k chr16 459 40 785216 785635 C 420 100.00 500 accept_chi 0 ALIGNMENT 0 YS2-10k01.q1k vc_4 62 459 5831 5830 F 398 0.00 500 reject_low 5 ALIGNMENT 38 YS2-10k01.q1k vc_7 463 500 13525 13562 F 38 100.00 500 reject_low 7 ALIGNMENT 41 YS2-10k01.q1k vc_1 500 460 2472 2512 C 41 100.00 500 reject_low 2 ALIGNMENT 0 YS2-10k01.q1k vc_5 461 62 37 36 C 400 0.00 500 reject_low 8 ALIGNMENT 0 YS2-10k01.q1k vc_7 62 462 13525 13524 F 401 0.00 500 reject_low 7 ALIGNMENT 41 YS2-10k01.q1k vc_2 500 460 2105 2145 C 41 100.00 500 reject_low 3 ALIGNMENT 0 YS2-10k01.q1k vc_3 459 62 2513 2512 C 398 0.00 500 reject_low 4 ALIGNMENT 41 YS2-10k01.q1k vc_3 500 460 2472 2512 C 41 100.00 500 reject_low 4 ALIGNMENT 41 YS2-10k01.q1k vc_4 460 500 5831 5871 F 41 100.00 500 reject_low 5 ALIGNMENT 0 YS2-10k01.q1k vc_5 461 62 5064 5063 C 400 0.00 500 reject_low 6 ALIGNMENT 0 YS2-10k01.q1k vc_1 459 62 2513 2512 C 398 0.00 500 reject_low 2 ALIGNMENT 0 YS2-10k01.p1k chr16 449 467 785635 785634 F 19 0.00 467 accept_chi 1 ALIGNMENT 39 YS2-10k01.q1k vc_5 500 462 5025 5063 C 39 100.00 500 reject_low 6 ALIGNMENT 36 YS2-10k01.q1k vc_5 497 462 1 36 C 36 100.00 500 reject_low 8 ALIGNMENT 0 YS2-10k01.q1k chr16 500 460 785217 785216 C 41 0.00 500 accept_chi 0 ALIGNMENT 907 YS2-10k02.q1k chr07 1122 37 1064422 1065506 C 1086 95.40 1280 accept 0 ALIGNMENT 0 YS2-10k04.q1k chr16 522 483 706271 706270 C 40 0.00 522 accept_chi 1 ALIGNMENT 36 YS2-10k04.q1k vc_5 519 484 1 36 C 36 100.00 522 reject_low 8 ALIGNMENT 0 YS2-10k04.q1k vc_2 481 62 2146 2145 C 420 0.00 522 reject_low 3 ALIGNMENT 38 YS2-10k04.q1k vc_7 485 522 13525 13562 F 38 100.00 522 reject_low 7 ALIGNMENT 0 YS2-10k04.q1k vc_3 481 62 2513 2512 C 420 0.00 522 reject_low 4 ALIGNMENT 0 YS2-10k04.q1k vc_5 483 62 37 36 C 422 0.00 522 reject_low 8 ALIGNMENT 0 YS2-10k04.q1k vc_4 62 481 5831 5830 F 420 0.00 522 reject_low 5 ALIGNMENT 428 YS2-10k04.q1k chr16 482 39 706270 706712 C 444 99.77 522 accept_chi 1 ALIGNMENT 0 YS2-10k04.q1k vc_5 483 62 5064 5063 C 422 0.00 522 reject_low 6 ALIGNMENT 41 YS2-10k04.q1k vc_4 482 522 5831 5871 F 41 100.00 522 reject_low 5 ALIGNMENT 41 YS2-10k04.q1k vc_2 522 482 2105 2145 C 41 100.00 522 reject_low 3 ALIGNMENT 0 YS2-10k04.q1k vc_1 481 62 2513 2512 C 420 0.00 522 reject_low 2 ALIGNMENT 0 YS2-10k04.q1k vc_7 62 484 13525 13524 F 423 0.00 522 reject_low 7 ALIGNMENT 41 YS2-10k04.q1k vc_1 522 482 2472 2512 C 41 100.00 522 reject_low 2 ALIGNMENT 39 YS2-10k04.q1k vc_5 522 484 5025 5063 C 39 100.00 522 reject_low 6 ALIGNMENT 41 YS2-10k04.q1k vc_3 522 482 2472 2512 C 41 100.00 522 reject_low 4 ALIGNMENT 432 YS2-10k04.p1k chr16 36 478 706270 706712 F 443 100.00 478 accept_chi 0 ALIGNMENT 0 YS2-10k05.p1k chr13 62 352 588600 588599 F 291 0.00 1224 reject_low 2 ALIGNMENT 0 YS2-10k05.p1k chr04 829 392 654337 654336 C 438 0.00 1224 reject_low 1 ALIGNMENT 0 YS2-10k05.p1k chr13 442 829 588688 588687 F 388 0.00 1224 reject_low 2 ALIGNMENT 22 YS2-10k05.p1k chr16 350 418 185371 185439 F 69 88.41 1224 reject_low 3 ALIGNMENT 0 YS2-10k05.p1k chr16 62 349 185371 185370 F 288 0.00 1224 reject_low 3 ALIGNMENT 29 YS2-10k05.p1k chr04 391 334 654336 654393 C 58 89.66 1224 reject_low 1 ALIGNMENT 0 YS2-10k05.p1k chr04 333 62 654394 654393 C 272 0.00 1224 reject_low 1 ALIGNMENT 884 YS2-10k05.p1k chr11 30 1130 336788 337913 F 1101 96.00 1224 accept 0 ALIGNMENT 0 YS2-10k05.p1k chr16 419 829 185439 185438 F 411 0.00 1224 reject_low 3 ALIGNMENT 20 YS2-10k05.p1k chr13 353 441 588600 588688 F 89 85.39 1224 reject_low 2 ALIGNMENT 1018 YS2-10k05.q1k chr11 1190 31 340676 341851 C 1160 96.47 1268 accept 0 ALIGNMENT 1042 YS2-10k06.p1k chr10 35 1295 615594 616868 F 1261 95.32 1298 accept 0 ALIGNMENT 987 YS2-10k06.q1k chr10 1234 32 618950 620168 C 1203 95.43 1338 accept 0 ALIGNMENT 978 YS2-10k07.p1k chr10 34 1127 45053 46161 F 1094 98.08 1298 accept 0 ALIGNMENT 974 YS2-10k07.q1k chr10 1119 40 45849 46943 C 1080 98.33 1295 accept 0 ALIGNMENT 986 YS2-10k08.p1k chr10 27 1198 45053 46228 F 1172 96.25 1334 accept 0 ALIGNMENT 998 YS2-10k08.q1k chr10 1183 38 45801 46943 C 1146 97.21 1351 accept 0 ALIGNMENT 0 YS2-10k09.q1k vc_5 375 62 37 36 C 314 0.00 414 reject_low 16 ALIGNMENT 0 YS2-10k09.q1k vc_3 372 62 2514 2513 C 311 0.00 414 reject_low 12 ALIGNMENT 331 YS2-10k09.q1k chr10 39 374 520871 521207 F 336 99.70 414 accept 0 ALIGNMENT 0 YS2-10k09.q1k vc_7 62 376 13525 13524 F 315 0.00 414 reject_low 15 ALIGNMENT 0 YS2-10k09.q1k chr12 237 414 97115 97114 F 178 0.00 414 reject_low 8 ALIGNMENT 291 YS2-10k09.p1k vc_7 1 552 13918 14480 F 552 85.87 639 reject_vc 6 ALIGNMENT 0 YS2-10k09.q1k vc_1 372 62 2514 2513 C 311 0.00 414 reject_low 10 ALIGNMENT 42 YS2-10k09.q1k vc_3 414 373 2472 2513 C 42 100.00 414 reject_low 12 ALIGNMENT 66 YS2-10k09.q1k chr12 59 236 96938 97115 F 178 79.78 414 reject_low 8 ALIGNMENT 0 YS2-10k09.q1k chr04 414 243 44442 44441 C 172 0.00 414 reject_low 9 ALIGNMENT 60 YS2-10k09.q1k chr04 242 60 44441 44623 C 183 77.60 414 reject_low 9 ALIGNMENT 0 YS2-10k09.q1k vc_2 372 62 2147 2146 C 311 0.00 414 reject_low 11 ALIGNMENT 291 YS2-10k09.p1k vc_7 1 552 456 1018 F 552 85.87 639 reject_vc 5 ALIGNMENT 0 YS2-10k09.q1k vc_4 62 372 5830 5829 F 311 0.00 414 reject_low 13 ALIGNMENT 0 YS2-10k09.q1k chr10 375 414 521207 521206 F 40 0.00 414 accept 0 ALIGNMENT 297 YS2-10k09.p1k vc_3 552 1 1187 1749 C 552 85.69 639 reject_vc 4 ALIGNMENT 297 YS2-10k09.p1k vc_2 552 1 1187 1749 C 552 85.69 639 reject_vc 3 ALIGNMENT 292 YS2-10k09.p1k vc_6 1 488 3712 4204 F 488 87.50 639 reject_vc 7 ALIGNMENT 297 YS2-10k09.p1k vc_1 552 1 1187 1749 C 552 85.69 639 reject_vc 2 ALIGNMENT 38 YS2-10k09.q1k vc_7 377 414 13525 13562 F 38 100.00 414 reject_low 15 ALIGNMENT 300 YS2-10k09.p1k vc_5 552 1 4107 4669 C 552 85.87 639 reject_vc 1 ALIGNMENT 39 YS2-10k09.q1k vc_5 414 376 5025 5063 C 39 100.00 414 reject_low 14 ALIGNMENT 42 YS2-10k09.q1k vc_1 414 373 2472 2513 C 42 100.00 414 reject_low 10 ALIGNMENT 0 YS2-10k09.q1k vc_5 375 62 5064 5063 C 314 0.00 414 reject_low 14 ALIGNMENT 42 YS2-10k09.q1k vc_4 373 414 5830 5871 F 42 100.00 414 reject_low 13 ALIGNMENT 36 YS2-10k09.q1k vc_5 411 376 1 36 C 36 100.00 414 reject_low 16 ALIGNMENT 42 YS2-10k09.q1k vc_2 414 373 2105 2146 C 42 100.00 414 reject_low 11 ALIGNMENT 56 YS2-10k10.p1k chr13 1006 905 352277 352378 C 102 86.27 1382 reject_low 1 ALIGNMENT 53 YS2-10k10.p1k chr14 1006 914 374869 374961 C 93 87.10 1382 reject_low 2 ALIGNMENT 0 YS2-10k10.p1k chr07 62 912 440720 440719 F 851 0.00 1382 reject_low 3 ALIGNMENT 966 YS2-10k10.q1k chr02 38 1132 28364 29467 F 1095 97.17 1303 accept_trans 0 ALIGNMENT 51 YS2-10k10.p1k chr07 913 1001 440720 440809 F 89 87.64 1382 reject_low 3 ALIGNMENT 0 YS2-10k10.p1k chr14 913 62 374962 374961 C 852 0.00 1382 reject_low 2 ALIGNMENT 0 YS2-10k10.p1k chr13 904 62 352379 352378 C 843 0.00 1382 reject_low 1 ALIGNMENT 1006 YS2-10k10.p1k chr02 1179 21 36219 37379 C 1159 96.29 1382 accept_trans 0 ALIGNMENT 42 YS2-10k11.p1k vc_3 688 516 1938 2104 C 173 78.03 1480 reject_low 3 ALIGNMENT 22 YS2-10k11.p1k vc_1 545 516 2441 2471 C 30 93.33 1480 reject_low 4 ALIGNMENT 248 YS2-10k11.p1k chr13 498 49 426438 426883 C 450 86.00 1480 accept 0 ALIGNMENT 42 YS2-10k11.p1k vc_2 688 516 1938 2104 C 173 78.03 1480 reject_low 2 ALIGNMENT 22 YS2-10k11.p1k vc_3 545 516 2441 2471 C 30 93.33 1480 reject_low 5 ALIGNMENT 42 YS2-10k11.p1k vc_1 688 516 1938 2104 C 173 78.03 1480 reject_low 1 ALIGNMENT 1027 YS2-10k13.q1k chr13 39 1212 615194 616376 F 1174 96.08 1351 accept 0 ALIGNMENT 960 YS2-10k13.p1k chr13 1126 29 615634 616752 C 1098 97.27 1288 accept 0 ALIGNMENT 0 YS2-10k14.q1k vc_4 62 257 5831 5830 F 196 0.00 298 reject_low 11 ALIGNMENT 457 YS2-10k14.p1k vc_6 1 670 3712 4377 F 670 90.90 730 reject_vc 2 ALIGNMENT 173 YS2-10k14.q1k chr12 38 257 933666 933887 F 220 98.18 298 accept 0 ALIGNMENT 0 YS2-10k14.q1k vc_2 257 62 2146 2145 C 196 0.00 298 reject_low 9 ALIGNMENT 454 YS2-10k14.p1k vc_2 670 1 1084 1749 C 670 90.75 730 reject_vc 4 ALIGNMENT 41 YS2-10k14.q1k vc_4 258 298 5831 5871 F 41 100.00 298 reject_low 11 ALIGNMENT 38 YS2-10k14.q1k vc_7 261 298 13525 13562 F 38 100.00 298 reject_low 13 ALIGNMENT 41 YS2-10k14.q1k vc_1 298 258 2472 2512 C 41 100.00 298 reject_low 8 ALIGNMENT 41 YS2-10k14.q1k vc_2 298 258 2105 2145 C 41 100.00 298 reject_low 9 ALIGNMENT 448 YS2-10k14.p1k vc_7 1 670 456 1121 F 670 90.45 730 reject_vc 6 ALIGNMENT 0 YS2-10k14.q1k vc_3 257 62 2513 2512 C 196 0.00 298 reject_low 10 ALIGNMENT 0 YS2-10k14.q1k vc_5 255 62 41 40 C 194 0.00 298 reject_low 14 ALIGNMENT 37 YS2-10k14.q1k vc_5 295 256 1 40 C 40 97.50 298 reject_low 14 ALIGNMENT 0 YS2-10k14.q1k vc_1 257 62 2513 2512 C 196 0.00 298 reject_low 8 ALIGNMENT 454 YS2-10k14.p1k vc_3 670 1 1084 1749 C 670 90.75 730 reject_vc 5 ALIGNMENT 41 YS2-10k14.q1k vc_3 298 258 2472 2512 C 41 100.00 298 reject_low 10 ALIGNMENT 0 YS2-10k14.q1k vc_7 62 260 13525 13524 F 199 0.00 298 reject_low 13 ALIGNMENT 448 YS2-10k14.p1k vc_7 1 670 13918 14583 F 670 90.45 730 reject_vc 7 ALIGNMENT 454 YS2-10k14.p1k vc_1 670 1 1084 1749 C 670 90.75 730 reject_vc 3 ALIGNMENT 457 YS2-10k14.p1k vc_5 670 1 4004 4669 C 670 90.90 730 reject_vc 1 ALIGNMENT 40 YS2-10k14.q1k vc_5 298 256 5025 5067 C 43 97.67 298 reject_low 12 ALIGNMENT 0 YS2-10k14.q1k vc_5 255 62 5068 5067 C 194 0.00 298 reject_low 12 ALIGNMENT 0 YS2-10k14.q1k chr12 258 298 933887 933886 F 41 0.00 298 accept 0 ALIGNMENT 1004 YS2-10k15.p1k chr08 1246 31 198968 200186 C 1216 95.81 1349 accept 0 ALIGNMENT 1009 YS2-10k15.q1k chr08 34 1181 195519 196679 F 1148 96.78 1266 accept 0 ALIGNMENT 0 YS2-10k15.p1k chr11 740 891 157495 157494 F 152 0.00 1349 reject_low 1 ALIGNMENT 113 YS2-10k15.p1k chr11 36 739 156789 157495 F 704 73.58 1349 reject_low 1 ALIGNMENT 903 YS2-10k17.p1k chr11 1137 27 97869 98997 C 1111 95.32 1296 accept 0 ALIGNMENT 1001 YS2-10k17.q1k chr11 37 1278 92448 93697 F 1242 94.93 1305 accept 0 ALIGNMENT 0 YS2-10k18.q1k chr16 284 369 465649 465648 F 86 0.00 369 reject_low 1 ALIGNMENT 36 YS2-10k18.q1k vc_5 366 331 1 36 C 36 100.00 369 reject_low 7 ALIGNMENT 40 YS2-10k18.q1k vc_3 369 330 2472 2511 C 40 100.00 369 reject_low 3 ALIGNMENT 38 YS2-10k18.q1k vc_7 332 369 13525 13562 F 38 100.00 369 reject_low 6 ALIGNMENT 0 YS2-10k18.q1k chr11 330 369 284150 284149 F 40 0.00 369 accept 0 ALIGNMENT 40 YS2-10k18.q1k vc_1 369 330 2472 2511 C 40 100.00 369 reject_low 2 ALIGNMENT 0 YS2-10k18.q1k vc_1 329 62 2512 2511 C 268 0.00 369 reject_low 2 ALIGNMENT 0 YS2-10k18.q1k vc_5 330 62 37 36 C 269 0.00 369 reject_low 7 ALIGNMENT 0 YS2-10k18.q1k vc_3 329 62 2512 2511 C 268 0.00 369 reject_low 3 ALIGNMENT 0 YS2-10k18.q1k vc_4 62 329 5832 5831 F 268 0.00 369 reject_low 4 ALIGNMENT 0 YS2-10k18.q1k vc_5 330 62 5064 5063 C 269 0.00 369 reject_low 5 ALIGNMENT 0 YS2-10k18.q1k vc_7 62 331 13525 13524 F 270 0.00 369 reject_low 6 ALIGNMENT 39 YS2-10k18.q1k vc_5 369 331 5025 5063 C 39 100.00 369 reject_low 5 ALIGNMENT 40 YS2-10k18.q1k vc_4 330 369 5832 5871 F 40 100.00 369 reject_low 4 ALIGNMENT 289 YS2-10k18.q1k chr11 26 329 283848 284150 F 304 99.01 369 accept 0 ALIGNMENT 139 YS2-10k18.q1k chr16 26 283 465393 465649 F 258 85.27 369 reject_low 1 ALIGNMENT 1065 YS2-10k19.p1k chr04 1211 27 828473 829659 C 1185 97.89 1305 accept 0 ALIGNMENT 962 YS2-10k19.q1k chr04 40 1143 825654 826772 F 1104 96.65 1255 accept 0 ALIGNMENT 128 YS2-10k19.p1k chr13 278 467 339551 339738 F 190 90.53 1305 reject_low 1 ALIGNMENT 0 YS2-10k19.p1k chr13 468 888 339738 339737 F 421 0.00 1305 reject_low 1 ALIGNMENT 0 YS2-10k19.p1k chr13 62 277 339551 339550 F 216 0.00 1305 reject_low 1 ALIGNMENT 948 YS2-10k21.q1k chr14 30 1185 243213 244377 F 1156 94.81 1218 accept 0 ALIGNMENT 1089 YS2-10k21.p1k chr14 1246 26 246638 247865 C 1221 97.46 1293 accept 0 ALIGNMENT 0 YS2-10k23.q1k chr14 446 485 498744 498743 F 40 0.00 485 accept 0 ALIGNMENT 0 YS2-10k23.q1k vc_5 446 62 37 36 C 385 0.00 485 reject_low 14 ALIGNMENT 0 YS2-10k23.q1k vc_3 445 62 2512 2511 C 384 0.00 485 reject_low 10 ALIGNMENT 0 YS2-10k23.q1k vc_4 62 445 5832 5831 F 384 0.00 485 reject_low 11 ALIGNMENT 38 YS2-10k23.q1k vc_7 448 485 13525 13562 F 38 100.00 485 reject_low 13 ALIGNMENT 228 YS2-10k23.p1k vc_7 1 426 13918 14338 F 426 86.85 470 reject_vc 7 ALIGNMENT 228 YS2-10k23.p1k vc_7 1 426 456 876 F 426 86.85 470 reject_vc 6 ALIGNMENT 0 YS2-10k23.q1k vc_7 62 447 13525 13524 F 386 0.00 485 reject_low 13 ALIGNMENT 40 YS2-10k23.q1k vc_2 485 446 2105 2144 C 40 100.00 485 reject_low 9 ALIGNMENT 0 YS2-10k23.q1k vc_1 445 62 2512 2511 C 384 0.00 485 reject_low 8 ALIGNMENT 228 YS2-10k23.p1k vc_3 426 1 1329 1749 C 426 86.85 470 reject_vc 3 ALIGNMENT 0 YS2-10k23.q1k vc_2 445 62 2145 2144 C 384 0.00 485 reject_low 9 ALIGNMENT 228 YS2-10k23.p1k vc_5 426 1 4249 4669 C 426 86.85 470 reject_vc 4 ALIGNMENT 40 YS2-10k23.q1k vc_1 485 446 2472 2511 C 40 100.00 485 reject_low 8 ALIGNMENT 380 YS2-10k23.q1k chr14 40 445 498338 498744 F 406 99.26 485 accept 0 ALIGNMENT 228 YS2-10k23.p1k vc_6 1 426 3712 4132 F 426 86.85 470 reject_vc 5 ALIGNMENT 228 YS2-10k23.p1k vc_2 426 1 1329 1749 C 426 86.85 470 reject_vc 2 ALIGNMENT 39 YS2-10k23.q1k vc_5 485 447 5025 5063 C 39 100.00 485 reject_low 12 ALIGNMENT 36 YS2-10k23.q1k vc_5 482 447 1 36 C 36 100.00 485 reject_low 14 ALIGNMENT 0 YS2-10k23.q1k vc_5 446 62 5064 5063 C 385 0.00 485 reject_low 12 ALIGNMENT 40 YS2-10k23.q1k vc_3 485 446 2472 2511 C 40 100.00 485 reject_low 10 ALIGNMENT 228 YS2-10k23.p1k vc_1 426 1 1329 1749 C 426 86.85 470 reject_vc 1 ALIGNMENT 40 YS2-10k23.q1k vc_4 446 485 5832 5871 F 40 100.00 485 reject_low 11 ALIGNMENT 1088 YS2-10k24.p1k chr16 1251 31 266564 267790 C 1221 96.89 1256 accept 0 ALIGNMENT 1078 YS2-10k24.q1k chr16 35 1209 265988 267155 F 1175 98.04 1234 accept 0 ALIGNMENT 36 YS2-10l01.q1k vc_1 891 852 2473 2512 C 40 97.50 1321 reject_low 13 ALIGNMENT 0 YS2-10l01.q1k vc_5 853 62 37 36 C 792 0.00 1321 reject_low 18 ALIGNMENT 21 YS2-10l01.p1k vc_1 896 875 2441 2462 C 22 100.00 1285|0,87 reject_low 7 ALIGNMENT 35 YS2-10l01.q1k vc_5 891 854 5026 5063 C 38 97.37 1321 reject_low 16 ALIGNMENT 0 YS2-10l01.q1k vc_4 892 62 5812 5811 C 831 0.00 1321 reject_low 10 ALIGNMENT 0 YS2-10l01.p1k vc_2 874 62 2096 2095 C 813 0.00 1285 reject_low 4 ALIGNMENT 0 YS2-10l01.q1k vc_7 62 854 13525 13524 F 793 0.00 1321 reject_low 17 ALIGNMENT 73 YS2-10l01.q1k vc_4 1147 893 5572 5811 C 255 81.18 1321 reject_low 10 ALIGNMENT 0 YS2-10l01.p1k vc_5 874 62 5016 5015 C 813 0.00 1285 reject_low 2 ALIGNMENT 762 YS2-10l01.p1k chr16 847 27 586069 586891 C 821 98.29 1285 accept_chi 1 ALIGNMENT 75 YS2-10l01.q1k vc_3 893 1147 2532 2769 F 255 81.18 1321 reject_low 9 ALIGNMENT 53 YS2-10l01.q1k vc_4 983 893 1446 1533 C 91 89.01 1321 reject_low 12 ALIGNMENT 75 YS2-10l01.q1k vc_5 893 1147 2399 2636 F 255 81.18 1321 reject_low 2 ALIGNMENT 0 YS2-10l01.p1k vc_4 62 874 5881 5880 F 813 0.00 1285 reject_low 5 ALIGNMENT 0 YS2-10l01.q1k vc_1 62 892 2532 2531 F 831 0.00 1321 reject_low 8 ALIGNMENT 64 YS2-10l01.p1k vc_2 1048 875 1931 2095 C 174 83.33 1285 reject_low 4 ALIGNMENT 0 YS2-10l01.q1k vc_4 62 892 127 126 F 831 0.00 1321 reject_low 11 ALIGNMENT 64 YS2-10l01.p1k vc_7 875 1048 13572 13736 F 174 83.33 1285 reject_low 6 ALIGNMENT 64 YS2-10l01.p1k vc_1 1048 875 1931 2095 C 174 83.33 1285|87,0 reject_low 7 ALIGNMENT 64 YS2-10l01.p1k vc_7 875 1048 110 274 F 174 83.33 1285 reject_low 3 ALIGNMENT 0 YS2-10l01.q1k vc_3 62 892 2532 2531 F 831 0.00 1321 reject_low 9 ALIGNMENT 770 YS2-10l01.q1k chr16 31 851 586069 586891 F 821 98.54 1321 accept_chi 0 ALIGNMENT 0 YS2-10l01.p1k vc_1 961 962 2376 2017 C 0 0.00 1285 reject_low 7 ALIGNMENT 0 YS2-10l01.q1k vc_5 853 62 5064 5063 C 792 0.00 1321 reject_low 16 ALIGNMENT 0 YS2-10l01.q1k vc_4 892 892 5871 6353 F 1 0.00 1321 reject_low 15 ALIGNMENT 0 YS2-10l01.q1k vc_5 62 892 2399 2398 F 831 0.00 1321 reject_low 2 ALIGNMENT 69 YS2-10l01.q1k vc_4 893 1061 6354 6514 F 169 84.02 1321 reject_low 15 ALIGNMENT 33 YS2-10l01.q1k vc_5 889 854 1 36 C 36 97.22 1321 reject_low 18 ALIGNMENT 69 YS2-10l01.q1k vc_4 893 1061 127 287 F 169 84.02 1321 reject_low 11 ALIGNMENT 0 YS2-10l01.q1k vc_7 892 62 2727 2726 C 831 0.00 1321 reject_low 3 ALIGNMENT 36 YS2-10l01.q1k vc_3 891 852 2473 2512 C 40 97.50 1321 reject_low 14 ALIGNMENT 34 YS2-10l01.q1k vc_7 855 891 13525 13561 F 37 97.30 1321 reject_low 17 ALIGNMENT 75 YS2-10l01.q1k vc_1 893 1147 2532 2769 F 255 81.18 1321 reject_low 8 ALIGNMENT 0 YS2-10l01.p1k vc_7 62 874 110 109 F 813 0.00 1285 reject_low 3 ALIGNMENT 64 YS2-10l01.p1k vc_4 875 1048 5881 6045 F 174 83.33 1285 reject_low 5 ALIGNMENT 0 YS2-10l01.p1k vc_7 62 874 13572 13571 F 813 0.00 1285 reject_low 6 ALIGNMENT 0 YS2-10l01.p1k vc_1 874 62 2096 2095 C 813 0.00 1285 reject_low 7 ALIGNMENT 0 YS2-10l01.q1k vc_4 892 62 1534 1533 C 831 0.00 1321 reject_low 12 ALIGNMENT 75 YS2-10l01.q1k vc_7 1147 893 2489 2726 C 255 81.57 1321 reject_low 3 ALIGNMENT 0 YS2-10l01.q1k vc_4 62 851 5831 5830 F 790 0.00 1321 reject_low 15 ALIGNMENT 0 YS2-10l01.q1k vc_1 851 62 2513 2512 C 790 0.00 1321 reject_low 13 ALIGNMENT 36 YS2-10l01.q1k vc_4 852 891 5831 5870 F 40 97.50 1321 reject_low 15 ALIGNMENT 64 YS2-10l01.p1k vc_5 1048 875 4851 5015 C 174 83.33 1285 reject_low 2 ALIGNMENT 0 YS2-10l01.q1k vc_3 851 62 2513 2512 C 790 0.00 1321 reject_low 14 ALIGNMENT 528 YS2-10l02.q1k chr12 33 646 556891 557507 F 614 96.09 1307 accept 0 ALIGNMENT 1015 YS2-10l02.p1k chr12 1209 37 561691 562879 C 1173 96.93 1225 accept 0 ALIGNMENT 52 YS2-10l03.q1k chr11 791 688 578600 578703 C 104 86.54 1201 reject_low 1 ALIGNMENT 966 YS2-10l03.p1k chr07 33 1105 113312 114397 F 1073 97.86 1246 accept 0 ALIGNMENT 0 YS2-10l03.q1k chr11 687 62 578704 578703 C 626 0.00 1201 reject_low 1 ALIGNMENT 611 YS2-10l03.q1k chr07 861 40 115420 116234 C 822 94.16 1201 accept 0 ALIGNMENT 0 YS2-10l04.q1k chr16 62 682 769199 769198 F 621 0.00 1239 reject_low 5 ALIGNMENT 0 YS2-10l04.q1k chr04 674 62 359687 359686 C 613 0.00 1239 reject_low 2 ALIGNMENT 0 YS2-10l04.q1k chr12 672 62 875487 875486 C 611 0.00 1239 reject_low 1 ALIGNMENT 0 YS2-10l04.q1k chr15 682 62 438746 438745 C 621 0.00 1239 reject_low 4 ALIGNMENT 706 YS2-10l04.q1k chr07 861 39 115418 116234 C 823 97.08 1239 accept 0 ALIGNMENT 99 YS2-10l04.q1k chr12 801 673 875359 875486 C 129 93.02 1239 reject_low 1 ALIGNMENT 0 YS2-10l04.q1k chr07 62 679 700948 700947 F 618 0.00 1239 reject_low 6 ALIGNMENT 100 YS2-10l04.q1k chr04 798 675 359564 359686 C 124 94.35 1239 reject_low 2 ALIGNMENT 0 YS2-10l04.q1k chr11 682 62 578709 578708 C 621 0.00 1239 reject_low 3 ALIGNMENT 1063 YS2-10l04.p1k chr07 34 1303 113312 114560 F 1270 96.14 1321 accept 0 ALIGNMENT 93 YS2-10l04.q1k chr07 680 795 700948 701062 F 116 93.97 1239 reject_low 6 ALIGNMENT 99 YS2-10l04.q1k chr11 798 683 578594 578708 C 116 95.69 1239 reject_low 3 ALIGNMENT 99 YS2-10l04.q1k chr15 798 683 438631 438745 C 116 95.69 1239 reject_low 4 ALIGNMENT 99 YS2-10l04.q1k chr16 683 798 769199 769313 F 116 95.69 1239 reject_low 5 ALIGNMENT 374 YS2-10l05.p1k chr09 164 1041 72753 73628 F 878 83.14 1339 accept 0 ALIGNMENT 347 YS2-10l06.q1k vc_5 1 519 2556 3061 F 519 90.94 824 reject_vc 1 ALIGNMENT 52 YS2-10l06.q1k vc_4 301 238 48 112 C 64 95.31 824 reject_vc 9 ALIGNMENT 290 YS2-10l06.q1k vc_2 1 301 2322 2623 F 301 99.00 824 reject_vc 5 ALIGNMENT 0 YS2-10l06.q1k vc_4 62 237 1548 1547 F 176 0.00 824 reject_vc 8 ALIGNMENT 51 YS2-10l06.q1k vc_7 54 3 6360 6411 C 52 100.00 824|1,0 reject_vc 7 ALIGNMENT 0 YS2-10l06.p1k chr15 194 212 965231 965230 F 19 0.00 212 accept 0 ALIGNMENT 52 YS2-10l06.q1k vc_4 238 301 1548 1612 F 64 95.31 824 reject_vc 8 ALIGNMENT 290 YS2-10l06.q1k vc_3 1 301 2689 2990 F 301 99.00 824 reject_vc 6 ALIGNMENT 0 YS2-10l06.q1k vc_7 53 54 5172 6360 C 0 0.00 824 reject_vc 7 ALIGNMENT 46 YS2-10l06.q1k vc_7 418 310 4589 4693 C 109 84.40 824 reject_vc 7 ALIGNMENT 290 YS2-10l06.q1k vc_1 1 301 2689 2990 F 301 99.00 824 reject_vc 4 ALIGNMENT 151 YS2-10l06.p1k chr15 33 193 965071 965231 F 161 100.00 212 accept 0 ALIGNMENT 0 YS2-10l06.q1k vc_4 237 62 113 112 C 176 0.00 824 reject_vc 9 ALIGNMENT 0 YS2-10l06.q1k vc_4 237 62 6340 6339 C 176 0.00 824 reject_vc 10 ALIGNMENT 235 YS2-10l06.q1k vc_7 301 53 4923 5172 C 249 98.39 824|0,1 reject_vc 7 ALIGNMENT 52 YS2-10l06.q1k vc_4 301 238 6275 6339 C 64 95.31 824 reject_vc 10 ALIGNMENT 347 YS2-10l06.q1k vc_7 519 1 2064 2569 C 519 90.94 824 reject_vc 2 ALIGNMENT 0 YS2-10l06.q1k vc_7 309 302 4694 4922 C 8 0.00 824 reject_vc 7 ALIGNMENT 330 YS2-10l06.q1k vc_4 418 1 5238 5654 C 418 94.02 824 reject_vc 3 ALIGNMENT 0 YS2-10l06.q1k vc_4 302 309 1613 1881 F 8 0.00 824 reject_vc 8 ALIGNMENT 56 YS2-10l06.q1k vc_4 310 519 1882 2077 F 210 80.48 824 reject_vc 8 ALIGNMENT 41 YS2-10l07.q1k vc_1 328 288 2472 2512 C 41 100.00 328 reject_low 2 ALIGNMENT 246 YS2-10l07.q1k chr03 38 287 283227 283476 F 250 100.00 328 accept_chi 1 ALIGNMENT 0 YS2-10l07.p1k chr03 296 279 283228 283227 C 18 0.00 296 accept_chi 0 ALIGNMENT 38 YS2-10l07.q1k vc_7 291 328 13525 13562 F 38 100.00 328 reject_low 4 ALIGNMENT 0 YS2-10l07.q1k chr03 288 328 283476 283475 F 41 0.00 328 accept_chi 1 ALIGNMENT 0 YS2-10l07.q1k vc_3 287 62 2513 2512 C 226 0.00 328 reject_low 3 ALIGNMENT 0 YS2-10l07.q1k vc_1 287 62 2513 2512 C 226 0.00 328 reject_low 2 ALIGNMENT 41 YS2-10l07.q1k vc_3 328 288 2472 2512 C 41 100.00 328 reject_low 3 ALIGNMENT 246 YS2-10l07.p1k chr03 278 29 283227 283476 C 250 100.00 296 accept_chi 0 ALIGNMENT 0 YS2-10l07.q1k vc_7 62 290 13525 13524 F 229 0.00 328 reject_low 4 ALIGNMENT 1013 YS2-10l09.p1k chr10 1248 31 707574 708799 C 1218 95.89 1369 accept 0 ALIGNMENT 970 YS2-10l09.q1k chr10 28 1167 705982 707132 F 1140 95.88 1317 accept 0 ALIGNMENT 0 YS2-10l10.q1k vc_4 62 576 5829 5828 F 515 0.00 619 reject_low 5 ALIGNMENT 0 YS2-10l10.q1k vc_5 580 62 37 36 C 519 0.00 619 reject_low 8 ALIGNMENT 0 YS2-10l10.q1k vc_3 576 62 2515 2514 C 515 0.00 619 reject_low 4 ALIGNMENT 39 YS2-10l10.q1k vc_5 619 581 5025 5063 C 39 100.00 619 reject_low 6 ALIGNMENT 525 YS2-10l10.q1k chr11 578 41 90512 91049 C 538 99.63 619 accept_chi 1 ALIGNMENT 0 YS2-10l10.q1k chr11 619 579 90513 90512 C 41 0.00 619 accept_chi 1 ALIGNMENT 42 YS2-10l10.q1k vc_1 619 577 2472 2514 C 43 100.00 619 reject_low 2 ALIGNMENT 36 YS2-10l10.q1k vc_5 616 581 1 36 C 36 100.00 619 reject_low 8 ALIGNMENT 525 YS2-10l10.p1k chr11 30 567 90512 91049 F 538 99.63 586 accept_chi 0 ALIGNMENT 42 YS2-10l10.q1k vc_2 619 577 2105 2147 C 43 100.00 619 reject_low 3 ALIGNMENT 0 YS2-10l10.q1k vc_5 580 62 5064 5063 C 519 0.00 619 reject_low 6 ALIGNMENT 0 YS2-10l10.q1k vc_2 576 62 2148 2147 C 515 0.00 619 reject_low 3 ALIGNMENT 42 YS2-10l10.q1k vc_3 619 577 2472 2514 C 43 100.00 619 reject_low 4 ALIGNMENT 0 YS2-10l10.q1k vc_7 62 581 13525 13524 F 520 0.00 619 reject_low 7 ALIGNMENT 38 YS2-10l10.q1k vc_7 582 619 13525 13562 F 38 100.00 619 reject_low 7 ALIGNMENT 0 YS2-10l10.q1k vc_1 576 62 2515 2514 C 515 0.00 619 reject_low 2 ALIGNMENT 0 YS2-10l10.p1k chr11 568 586 91049 91048 F 19 0.00 586 accept_chi 0 ALIGNMENT 42 YS2-10l10.q1k vc_4 577 619 5829 5871 F 43 100.00 619 reject_low 5 ALIGNMENT 0 YS2-10l11.q1k chr13 62 414 184221 184220 F 353 0.00 1361 reject_low 14 ALIGNMENT 0 YS2-10l11.q1k chr14 677 896 525043 525042 F 220 0.00 1361 reject_low 17 ALIGNMENT 0 YS2-10l11.q1k chr07 62 490 817206 817205 F 429 0.00 1361 reject_low 24 ALIGNMENT 0 YS2-10l11.q1k chr12 414 62 215368 215367 C 353 0.00 1361 reject_low 6 ALIGNMENT 0 YS2-10l11.q1k chr14 677 896 519477 519476 F 220 0.00 1361 reject_low 16 ALIGNMENT 839 YS2-10l11.p1k chr05 29 1159 564213 565349 F 1131 91.95 1325 accept 0 ALIGNMENT 105 YS2-10l11.q1k chr02 415 676 221091 221353 F 262 83.59 1361 reject_low 20 ALIGNMENT 0 YS2-10l11.q1k chr03 62 414 151568 151567 F 353 0.00 1361 reject_low 22 ALIGNMENT 0 YS2-10l11.q1k chr07 414 62 817679 817678 C 353 0.00 1361 reject_low 11 ALIGNMENT 0 YS2-10l11.q1k chr14 62 407 524774 524773 F 346 0.00 1361 reject_low 17 ALIGNMENT 127 YS2-10l11.q1k chr01 676 408 160259 160531 C 269 85.50 1361 reject_low 9 ALIGNMENT 97 YS2-10l11.q1k chr03 415 676 151568 151828 F 262 82.44 1361 reject_low 22 ALIGNMENT 0 YS2-10l11.q1k chr02 677 896 221353 221352 F 220 0.00 1361 reject_low 20 ALIGNMENT 0 YS2-10l11.q1k chr03 896 677 124152 124151 C 220 0.00 1361 reject_low 23 ALIGNMENT 0 YS2-10l11.q1k chr13 414 62 357285 357284 C 353 0.00 1361 reject_low 19 ALIGNMENT 0 YS2-10l11.q1k chr11 376 62 313566 313565 C 315 0.00 1361 reject_low 2 ALIGNMENT 126 YS2-10l11.q1k chr15 415 701 600454 600739 F 287 84.67 1361 reject_low 3 ALIGNMENT 0 YS2-10l11.q1k chr15 697 896 118039 118038 F 200 0.00 1361 reject_low 7 ALIGNMENT 0 YS2-10l11.q1k chr02 697 896 259907 259906 F 200 0.00 1361 reject_low 13 ALIGNMENT 130 YS2-10l11.q1k chr15 415 696 117753 118039 F 282 84.75 1361 reject_low 7 ALIGNMENT 0 YS2-10l11.q1k chr07 896 697 817399 817398 C 200 0.00 1361 reject_low 11 ALIGNMENT 0 YS2-10l11.q1k chr03 896 677 168616 168615 C 220 0.00 1361 reject_low 15 ALIGNMENT 125 YS2-10l11.q1k chr07 696 415 817398 817678 C 282 85.11 1361 reject_low 11 ALIGNMENT 127 YS2-10l11.q1k chr01 676 408 165847 166119 C 269 85.50 1361 reject_low 10 ALIGNMENT 0 YS2-10l11.q1k chr01 896 677 165848 165847 C 220 0.00 1361 reject_low 10 ALIGNMENT 0 YS2-10l11.q1k chr04 407 62 878588 878587 C 346 0.00 1361 reject_low 4 ALIGNMENT 103 YS2-10l11.q1k chr16 415 676 560529 560789 F 262 83.21 1361 reject_low 21 ALIGNMENT 75 YS2-10l11.q1k chr07 491 673 817206 817387 F 183 84.15 1361 reject_low 24 ALIGNMENT 0 YS2-10l11.q1k chr02 512 482 258849 258859 C 31 0.00 1361 reject_low 26 ALIGNMENT 0 YS2-10l11.q1k chr03 62 407 149524 149523 F 346 0.00 1361 reject_low 18 ALIGNMENT 0 YS2-10l11.q1k chr15 62 414 594872 594871 F 353 0.00 1361 reject_low 12 ALIGNMENT 0 YS2-10l11.q1k chr05 896 697 498080 498079 C 200 0.00 1361 reject_low 8 ALIGNMENT 0 YS2-10l11.q1k chr01 407 62 160532 160531 C 346 0.00 1361 reject_low 9 ALIGNMENT 0 YS2-10l11.q1k chr04 377 62 434738 434737 C 316 0.00 1361 reject_low 1 ALIGNMENT 47 YS2-10l11.q1k chr02 481 426 258860 258915 C 56 96.43 1361 reject_low 26 ALIGNMENT 115 YS2-10l11.q1k chr03 408 675 149524 149786 F 268 83.96 1361 reject_low 18 ALIGNMENT 0 YS2-10l11.q1k chr01 896 677 160260 160259 C 220 0.00 1361 reject_low 9 ALIGNMENT 0 YS2-10l11.q1k chr14 62 407 519208 519207 F 346 0.00 1361 reject_low 16 ALIGNMENT 0 YS2-10l11.q1k chr03 414 62 124412 124411 C 353 0.00 1361 reject_low 23 ALIGNMENT 0 YS2-10l11.q1k chr04 896 697 434421 434420 C 200 0.00 1361 reject_low 1 ALIGNMENT 130 YS2-10l11.q1k chr12 696 415 215081 215367 C 282 85.11 1361 reject_low 6 ALIGNMENT 0 YS2-10l11.q1k chr02 62 414 259627 259626 F 353 0.00 1361 reject_low 13 ALIGNMENT 0 YS2-10l11.q1k chr03 407 62 168885 168884 C 346 0.00 1361 reject_low 15 ALIGNMENT 0 YS2-10l11.q1k chr04 697 896 1096099 1096098 F 200 0.00 1361 reject_low 5 ALIGNMENT 223 YS2-10l11.q1k chr05 377 41 567016 567355 C 337 90.80 1361 accept 0 ALIGNMENT 0 YS2-10l11.q1k chr13 697 896 184501 184500 F 200 0.00 1361 reject_low 14 ALIGNMENT 0 YS2-10l11.q1k chr07 674 896 817387 817386 F 223 0.00 1361 reject_low 24 ALIGNMENT 0 YS2-10l11.q1k chr04 62 414 1095813 1095812 F 353 0.00 1361 reject_low 5 ALIGNMENT 0 YS2-10l11.q1k chr02 425 410 258916 258943 C 16 0.00 1361 reject_low 26 ALIGNMENT 0 YS2-10l11.q1k chr16 62 414 560529 560528 F 353 0.00 1361 reject_low 21 ALIGNMENT 0 YS2-10l11.q1k chr16 677 896 560789 560788 F 220 0.00 1361 reject_low 21 ALIGNMENT 112 YS2-10l11.q1k chr13 676 415 357024 357284 C 262 84.73 1361 reject_low 19 ALIGNMENT 0 YS2-10l11.q1k chr15 62 414 600454 600453 F 353 0.00 1361 reject_low 3 ALIGNMENT 0 YS2-10l11.q1k chr03 677 896 151828 151827 F 220 0.00 1361 reject_low 22 ALIGNMENT 0 YS2-10l11.q1k chr13 896 677 357025 357024 C 220 0.00 1361 reject_low 19 ALIGNMENT 0 YS2-10l11.q1k chr03 414 62 143027 143026 C 353 0.00 1361 reject_low 25 ALIGNMENT 69 YS2-10l11.q1k chr03 639 415 142803 143026 C 225 81.33 1361 reject_low 25 ALIGNMENT 26 YS2-10l11.q1k chr02 409 377 258944 258976 C 33 96.97 1361 reject_low 26 ALIGNMENT 0 YS2-10l11.q1k chr15 697 896 595152 595151 F 200 0.00 1361 reject_low 12 ALIGNMENT 0 YS2-10l11.q1k chr05 414 62 498366 498365 C 353 0.00 1361 reject_low 8 ALIGNMENT 0 YS2-10l11.q1k chr05 766 378 566696 567015 C 389 0.00 1361 accept 0 ALIGNMENT 93 YS2-10l11.q1k chr02 696 513 258668 258848 C 184 86.96 1361 reject_low 26 ALIGNMENT 0 YS2-10l11.q1k chr15 702 896 600739 600738 F 195 0.00 1361 reject_low 3 ALIGNMENT 0 YS2-10l11.q1k chr11 896 696 313249 313248 C 201 0.00 1361 reject_low 2 ALIGNMENT 130 YS2-10l11.q1k chr04 415 696 1095813 1096099 F 282 84.75 1361 reject_low 5 ALIGNMENT 0 YS2-10l11.q1k chr02 62 414 221091 221090 F 353 0.00 1361 reject_low 20 ALIGNMENT 0 YS2-10l11.q1k chr03 676 896 149786 149785 F 221 0.00 1361 reject_low 18 ALIGNMENT 118 YS2-10l11.q1k chr03 676 408 168615 168884 C 269 84.01 1361 reject_low 15 ALIGNMENT 94 YS2-10l11.q1k chr03 676 415 124151 124411 C 262 82.44 1361 reject_low 23 ALIGNMENT 0 YS2-10l11.q1k chr15 62 414 117753 117752 F 353 0.00 1361 reject_low 7 ALIGNMENT 118 YS2-10l11.q1k chr14 408 676 524774 525043 F 269 84.01 1361 reject_low 17 ALIGNMENT 122 YS2-10l11.q1k chr02 415 696 259627 259907 F 282 84.40 1361 reject_low 13 ALIGNMENT 230 YS2-10l11.q1k chr11 695 377 313248 313565 C 319 93.10 1361 reject_low 2 ALIGNMENT 127 YS2-10l11.q1k chr05 696 415 498079 498365 C 282 84.75 1361 reject_low 8 ALIGNMENT 252 YS2-10l11.q1k chr05 1215 767 566246 566695 C 449 86.41 1361 accept 0 ALIGNMENT 0 YS2-10l11.q1k chr01 407 62 166120 166119 C 346 0.00 1361 reject_low 10 ALIGNMENT 0 YS2-10l11.q1k chr03 896 640 142804 142803 C 257 0.00 1361 reject_low 25 ALIGNMENT 125 YS2-10l11.q1k chr15 415 696 594872 595152 F 282 84.75 1361 reject_low 12 ALIGNMENT 0 YS2-10l11.q1k chr12 896 697 215082 215081 C 200 0.00 1361 reject_low 6 ALIGNMENT 0 YS2-10l11.q1k chr04 896 697 878299 878298 C 200 0.00 1361 reject_low 4 ALIGNMENT 134 YS2-10l11.q1k chr04 696 408 878298 878587 C 289 84.78 1361 reject_low 4 ALIGNMENT 0 YS2-10l11.q1k chr02 376 62 258977 258976 C 315 0.00 1361 reject_low 26 ALIGNMENT 119 YS2-10l11.q1k chr13 415 696 184221 184501 F 282 84.04 1361 reject_low 14 ALIGNMENT 118 YS2-10l11.q1k chr14 408 676 519208 519477 F 269 84.01 1361 reject_low 16 ALIGNMENT 0 YS2-10l11.q1k chr02 896 697 258669 258668 C 200 0.00 1361 reject_low 26 ALIGNMENT 232 YS2-10l11.q1k chr04 696 378 434420 434737 C 319 93.42 1361 reject_low 1 ALIGNMENT 0 YS2-10l12.q1k vc_7 304 304 4700 4921 C 1 0.00 957 reject_low 12 ALIGNMENT 148 YS2-10l12.p1k vc_2 311 1 1442 1749 C 311 83.28 854 reject_low 3 ALIGNMENT 142 YS2-10l12.p1k vc_7 1 311 13918 14225 F 311 82.64 854 reject_low 7 ALIGNMENT 0 YS2-10l12.q1k vc_7 53 54 5172 6360 C 0 0.00 957 reject_low 12 ALIGNMENT 0 YS2-10l12.q1k vc_4 305 307 1615 1878 F 3 0.00 957 reject_low 11 ALIGNMENT 62 YS2-10l12.q1k vc_4 304 238 6273 6339 C 67 98.51 957 reject_low 14 ALIGNMENT 148 YS2-10l12.p1k vc_5 311 1 4362 4669 C 311 83.28 854 reject_vc 0 ALIGNMENT 85 YS2-10l12.q1k vc_7 421 305 4583 4699 C 117 91.45 957 reject_low 12 ALIGNMENT 290 YS2-10l12.q1k vc_1 1 303 2689 2991 F 303 98.68 957 reject_low 8 ALIGNMENT 477 YS2-10l12.q1k vc_7 636 1 1936 2569 C 636 92.14 957 reject_low 1 ALIGNMENT 198 YS2-10l12.q1k vc_4 308 711 1879 2286 F 404 84.16 957 reject_low 11 ALIGNMENT 148 YS2-10l12.p1k vc_6 1 311 3712 4019 F 311 83.28 854 reject_low 5 ALIGNMENT 290 YS2-10l12.q1k vc_3 1 303 2689 2991 F 303 98.68 957 reject_low 10 ALIGNMENT 0 YS2-10l12.q1k vc_4 237 62 113 112 C 176 0.00 957 reject_low 13 ALIGNMENT 290 YS2-10l12.q1k vc_2 1 303 2322 2624 F 303 98.68 957 reject_low 9 ALIGNMENT 62 YS2-10l12.q1k vc_4 238 304 1548 1614 F 67 98.51 957 reject_low 11 ALIGNMENT 51 YS2-10l12.q1k vc_7 54 3 6360 6411 C 52 100.00 957|1,0 reject_low 12 ALIGNMENT 148 YS2-10l12.p1k vc_3 311 1 1442 1749 C 311 83.28 854 reject_low 4 ALIGNMENT 148 YS2-10l12.p1k vc_1 311 1 1442 1749 C 311 83.28 854 reject_low 2 ALIGNMENT 0 YS2-10l12.q1k vc_4 237 62 6340 6339 C 176 0.00 957 reject_low 14 ALIGNMENT 0 YS2-10l12.q1k vc_4 62 237 1548 1547 F 176 0.00 957 reject_low 11 ALIGNMENT 371 YS2-10l12.q1k vc_4 421 1 5232 5654 C 421 96.20 957 reject_low 6 ALIGNMENT 496 YS2-10l12.q1k vc_5 1 711 2556 3270 F 711 90.58 957 reject_vc 0 ALIGNMENT 142 YS2-10l12.p1k vc_7 1 311 456 763 F 311 82.64 854 reject_low 1 ALIGNMENT 62 YS2-10l12.q1k vc_4 304 238 46 112 C 67 98.51 957 reject_low 13 ALIGNMENT 235 YS2-10l12.q1k vc_7 303 53 4922 5172 C 251 98.01 957|0,1 reject_low 12 ALIGNMENT 1075 YS2-10l13.p1k chr02 28 1306 630241 631534 F 1279 95.86 1344 accept 0 ALIGNMENT 967 YS2-10l13.q1k chr02 1159 29 633173 634326 C 1131 96.20 1305 accept 0 ALIGNMENT 256 YS2-10l14.q1k chr07 182 993 147738 148542 F 812 78.69 1364 accept 0 ALIGNMENT 1039 YS2-10l16.q1k chr08 1273 39 353590 354836 C 1235 95.47 1325 accept 0 ALIGNMENT 901 YS2-10l16.p1k chr08 27 1051 349870 350906 F 1025 97.46 1274 accept 0 ALIGNMENT 998 YS2-10l17.p1k chr16 1263 35 766960 768189 C 1229 95.77 1335 accept 0 ALIGNMENT 892 YS2-10l17.q1k chr16 53 1042 762930 763930 F 990 97.27 1258 accept 0 ALIGNMENT 1054 YS2-10l18.q1k chr12 38 1209 452731 453904 F 1172 96.50 1283 accept 0 ALIGNMENT 383 YS2-10l18.p1k chr12 459 5 466114 466564 C 455 95.38 1209 accept 1 ALIGNMENT 383 YS2-10l18.p1k chr12 459 5 456977 457427 C 455 95.38 1209 accept 0 ALIGNMENT 1054 YS2-10l18.q1k chr12 38 1209 461868 463041 F 1172 96.50 1283 accept 1 ALIGNMENT 943 YS2-10l20.q1k chr14 1190 38 156671 157834 C 1153 95.84 1269 accept 0 ALIGNMENT 1013 YS2-10l20.p1k chr14 26 1202 155281 156471 F 1177 96.77 1289 accept 0 ALIGNMENT 0 YS2-10l21.q1k chr04 367 185 1301607 1301606 C 183 0.00 367 reject_low 3 ALIGNMENT 0 YS2-10l21.q1k chr05 333 367 53366 53365 F 35 0.00 367 accept_chi 1 ALIGNMENT 0 YS2-10l21.q1k vc_1 326 62 2513 2512 C 265 0.00 367 reject_low 4 ALIGNMENT 105 YS2-10l21.p1k chr04 169 324 1301606 1301761 F 156 89.10 343 reject_low 2 ALIGNMENT 38 YS2-10l21.q1k vc_7 330 367 13525 13562 F 38 100.00 367 reject_low 8 ALIGNMENT 96 YS2-10l21.q1k chr04 184 30 1301606 1301761 C 155 87.10 367 reject_low 3 ALIGNMENT 0 YS2-10l21.q1k vc_3 326 62 2513 2512 C 265 0.00 367 reject_low 5 ALIGNMENT 0 YS2-10l21.q1k vc_5 328 62 5064 5063 C 267 0.00 367 reject_low 7 ALIGNMENT 41 YS2-10l21.q1k vc_4 327 367 5831 5871 F 41 100.00 367 reject_low 6 ALIGNMENT 39 YS2-10l21.q1k vc_5 367 329 5025 5063 C 39 100.00 367 reject_low 7 ALIGNMENT 41 YS2-10l21.q1k vc_3 367 327 2472 2512 C 41 100.00 367 reject_low 5 ALIGNMENT 36 YS2-10l21.q1k vc_5 364 329 1 36 C 36 100.00 367 reject_low 9 ALIGNMENT 0 YS2-10l21.q1k vc_7 62 329 13525 13524 F 268 0.00 367 reject_low 8 ALIGNMENT 0 YS2-10l21.p1k chr04 325 343 1301761 1301760 F 19 0.00 343 reject_low 2 ALIGNMENT 0 YS2-10l21.q1k vc_4 62 326 5831 5830 F 265 0.00 367 reject_low 6 ALIGNMENT 41 YS2-10l21.q1k vc_1 367 327 2472 2512 C 41 100.00 367 reject_low 4 ALIGNMENT 0 YS2-10l21.q1k vc_5 328 62 37 36 C 267 0.00 367 reject_low 9 ALIGNMENT 286 YS2-10l21.q1k chr05 30 332 53063 53366 F 303 98.68 367 accept_chi 1 ALIGNMENT 294 YS2-10l21.p1k chr05 324 25 53063 53362 C 300 100.00 343 accept_chi 0 ALIGNMENT 0 YS2-10l21.p1k chr04 62 168 1301606 1301605 F 107 0.00 343 reject_low 2 ALIGNMENT 0 YS2-10l21.p1k chr05 343 325 53064 53063 C 19 0.00 343 accept_chi 0 ALIGNMENT 1039 YS2-10l22.p1k chr12 1250 27 816236 817451 C 1224 96.16 1310 accept_chi 0 ALIGNMENT 99 YS2-10l22.q1k chr12 1202 968 202344 202592 C 235 82.98 1218 reject_low 2 ALIGNMENT 0 YS2-10l22.q1k chr12 967 62 202593 202592 C 906 0.00 1218 reject_low 2 ALIGNMENT 995 YS2-10l22.q1k chr13 1208 30 510093 511286 C 1179 95.67 1218 accept_chi 1 ALIGNMENT 0 YS2-10l23.q1k chr14 865 452 16141 16140 C 414 0.00 1208 reject_low 2 ALIGNMENT 260 YS2-10l23.q1k chr14 451 40 16140 16551 C 412 88.11 1208 reject_low 2 ALIGNMENT 0 YS2-10l23.q1k chr06 865 460 14317 14316 C 406 0.00 1208 reject_low 1 ALIGNMENT 185 YS2-10l23.q1k chr15 399 40 1691 2050 C 360 84.44 1208 reject_low 5 ALIGNMENT 0 YS2-10l23.q1k chr10 459 865 728171 728170 F 407 0.00 1208 reject_low 3 ALIGNMENT 203 YS2-10l23.q1k chr03 40 399 314574 314933 F 360 86.11 1208 reject_low 4 ALIGNMENT 321 YS2-10l23.q1k chr06 459 40 14316 14735 C 420 92.62 1208 reject_low 1 ALIGNMENT 0 YS2-10l23.q1k chr03 400 865 314933 314932 F 466 0.00 1208 reject_low 4 ALIGNMENT 378 YS2-10l23.q1k chr04 459 40 17588 18007 C 420 97.14 1208 accept_tel 0 ALIGNMENT 0 YS2-10l23.q1k chr04 865 460 17589 17588 C 406 0.00 1208 accept_tel 0 ALIGNMENT 198 YS2-10l23.q1k chr10 57 458 727770 728171 F 402 83.58 1208 reject_low 3 ALIGNMENT 0 YS2-10l23.q1k chr15 865 400 1692 1691 C 466 0.00 1208 reject_low 5 ALIGNMENT 1056 YS2-10m01.q1k chr16 34 1237 750704 751912 F 1204 97.26 1250 accept_chi 0 ALIGNMENT 1053 YS2-10m01.p1k chr04 1231 30 1137651 1138849 C 1202 97.00 1233 accept_chi 1 ALIGNMENT 299 YS2-10m02.q1k chr02 704 1134 809006 809441 F 431 90.49 1264 reject_low 22 ALIGNMENT 0 YS2-10m02.q1k chr12 62 738 94736 94735 F 677 0.00 1264 reject_low 26 ALIGNMENT 543 YS2-10m02.p1k chr09 1094 66 433324 434362 C 1029 85.52 1215 reject_low 9 ALIGNMENT 0 YS2-10m02.q1k chr10 120 62 9767 9766 C 59 0.00 1264 reject_low 4 ALIGNMENT 20 YS2-10m02.q1k chr12 238 201 13974 14011 C 38 86.84 1264 reject_low 12 ALIGNMENT 0 YS2-10m02.q1k chr12 200 62 14012 14011 C 139 0.00 1264 reject_low 12 ALIGNMENT 0 YS2-10m02.p1k chr07 100 62 1080706 1080705 C 39 0.00 1215 reject_low 18 ALIGNMENT 0 YS2-10m02.p1k chr01 62 107 176631 176630 F 46 0.00 1215 reject_low 25 ALIGNMENT 0 YS2-10m02.q1k chr07 62 703 1080267 1080266 F 642 0.00 1264 reject_low 23 ALIGNMENT 554 YS2-10m02.p1k chr11 30 1094 1704 2783 F 1065 85.16 1215 reject_low 7 ALIGNMENT 0 YS2-10m02.q1k chr05 62 711 63695 63694 F 650 0.00 1264 reject_low 24 ALIGNMENT 517 YS2-10m02.p1k chr15 30 1094 11449 12512 F 1065 84.51 1215 reject_low 8 ALIGNMENT 270 YS2-10m02.q1k chr15 288 1042 1082368 1083138 F 755 79.74 1264 reject_low 13 ALIGNMENT 369 YS2-10m02.p1k chr02 539 40 809006 809504 C 500 91.80 1215 reject_low 17 ALIGNMENT 0 YS2-10m02.q1k chr02 278 62 8446 8445 C 217 0.00 1264 reject_low 6 ALIGNMENT 0 YS2-10m02.q1k chr13 62 287 922175 922174 F 226 0.00 1264 reject_low 14 ALIGNMENT 269 YS2-10m02.q1k chr05 712 1103 63695 64085 F 392 90.56 1264 reject_low 24 ALIGNMENT 300 YS2-10m02.q1k chr07 704 1103 1080267 1080669 F 400 92.25 1264 reject_low 23 ALIGNMENT 681 YS2-10m02.p1k chr09 30 1094 8684 9757 F 1065 89.01 1215 reject_low 3 ALIGNMENT 644 YS2-10m02.q1k chr10 1103 121 8781 9766 C 983 89.32 1264 reject_low 4 ALIGNMENT 576 YS2-10m02.q1k chr02 1189 279 7517 8445 C 911 88.91 1264 reject_low 6 ALIGNMENT 0 YS2-10m02.q1k chr09 62 120 433297 433296 F 59 0.00 1264 reject_low 9 ALIGNMENT 0 YS2-10m02.q1k chr09 120 62 9784 9783 C 59 0.00 1264 reject_low 3 ALIGNMENT 626 YS2-10m02.q1k chr07 1163 121 6230 7279 C 1043 87.82 1264 reject_low 5 ALIGNMENT 0 YS2-10m02.q1k chr14 62 120 781286 781285 F 59 0.00 1264 reject_low 1 ALIGNMENT 671 YS2-10m02.p1k chr12 1094 30 1062319 1063377 C 1065 89.01 1215 reject_low 2 ALIGNMENT 341 YS2-10m02.p1k chr16 68 922 7873 8743 F 855 81.29 1215 reject_low 16 ALIGNMENT 0 YS2-10m02.p1k chr03 854 522 290000 289999 C 333 0.00 1215 reject_low 27 ALIGNMENT 0 YS2-10m02.q1k chr15 62 287 1082368 1082367 F 226 0.00 1264 reject_low 13 ALIGNMENT 565 YS2-10m02.q1k chr12 1189 275 12995 13926 C 915 88.31 1264 reject_low 12 ALIGNMENT 369 YS2-10m02.p1k chr07 539 101 1080267 1080705 C 439 94.99 1215 reject_low 18 ALIGNMENT 719 YS2-10m02.p1k chr14 1120 30 781287 782380 C 1091 89.83 1215 reject_low 1 ALIGNMENT 799 YS2-10m02.q1k chr01 1103 50 1812 2865 C 1054 92.60 1264 accept 0 ALIGNMENT 0 YS2-10m02.q1k chr02 62 703 809006 809005 F 642 0.00 1264 reject_low 22 ALIGNMENT 644 YS2-10m02.q1k chr09 1103 121 8798 9783 C 983 89.32 1264 reject_low 3 ALIGNMENT 0 YS2-10m02.p1k chr03 323 62 290194 290193 C 262 0.00 1215 reject_low 27 ALIGNMENT 218 YS2-10m02.p1k chr01 108 504 176631 177031 F 397 85.89 1215 reject_low 25 ALIGNMENT 0 YS2-10m02.p1k chr02 854 540 809007 809006 C 315 0.00 1215 reject_low 17 ALIGNMENT 328 YS2-10m02.p1k chr05 531 132 63695 64090 C 400 94.75 1215 reject_low 21 ALIGNMENT 0 YS2-10m02.p1k chr05 854 532 63696 63695 C 323 0.00 1215 reject_low 21 ALIGNMENT 0 YS2-10m02.p1k chr07 854 540 1080268 1080267 C 315 0.00 1215 reject_low 18 ALIGNMENT 0 YS2-10m02.q1k chr04 62 386 1522867 1522866 F 325 0.00 1264 reject_low 20 ALIGNMENT 692 YS2-10m02.q1k chr14 121 1189 781286 782368 F 1069 89.34 1264 reject_low 1 ALIGNMENT 401 YS2-10m02.p1k chr04 871 30 1522853 1523703 C 842 83.97 1215 reject_low 15 ALIGNMENT 20 YS2-10m02.p1k chr12 1003 1040 13974 14011 F 38 86.84 1215 reject_low 29 ALIGNMENT 62 YS2-10m02.q1k chr03 722 917 289999 290191 F 196 79.08 1264 reject_low 28 ALIGNMENT 274 YS2-10m02.q1k chr13 288 1093 922175 922995 F 806 79.28 1264 reject_low 14 ALIGNMENT 642 YS2-10m02.p1k chr12 30 966 12983 13926 F 937 90.50 1215 reject_low 12 ALIGNMENT 0 YS2-10m02.p1k chr05 131 62 64091 64090 C 70 0.00 1215 reject_low 21 ALIGNMENT 0 YS2-10m02.q1k chr08 274 62 12771 12770 C 213 0.00 1264 reject_low 11 ALIGNMENT 318 YS2-10m02.q1k chr04 387 1103 1522867 1523589 F 717 82.71 1264 reject_low 20 ALIGNMENT 467 YS2-10m02.q1k chr08 1134 275 11893 12770 C 860 85.70 1264 reject_low 11 ALIGNMENT 479 YS2-10m02.q1k chr03 121 1093 307166 308153 F 973 84.17 1264 reject_low 10 ALIGNMENT 517 YS2-10m02.p1k chr08 101 966 11890 12770 F 866 87.53 1215 reject_low 11 ALIGNMENT 0 YS2-10m02.q1k chr07 120 62 7280 7279 C 59 0.00 1264 reject_low 5 ALIGNMENT 659 YS2-10m02.p1k chr07 39 1094 6195 7253 F 1056 88.64 1215 reject_low 5 ALIGNMENT 293 YS2-10m02.q1k chr16 1166 288 7873 8773 C 879 79.18 1264 reject_low 19 ALIGNMENT 136 YS2-10m02.q1k chr12 739 1093 94736 95102 F 355 80.85 1264 reject_low 26 ALIGNMENT 473 YS2-10m02.q1k chr09 121 971 433297 434156 F 851 86.25 1264 reject_low 9 ALIGNMENT 0 YS2-10m02.q1k chr11 120 62 2810 2809 C 59 0.00 1264 reject_low 7 ALIGNMENT 0 YS2-10m02.q1k chr16 287 62 8774 8773 C 226 0.00 1264 reject_low 19 ALIGNMENT 0 YS2-10m02.p1k chr08 62 100 11890 11889 F 39 0.00 1215 reject_low 11 ALIGNMENT 315 YS2-10m02.p1k chr13 922 68 922205 923074 C 855 80.47 1215 reject_low 14 ALIGNMENT 0 YS2-10m02.q1k chr12 274 239 13927 13973 C 36 0.00 1264 reject_low 12 ALIGNMENT 0 YS2-10m02.q1k chr03 62 120 307166 307165 F 59 0.00 1264 reject_low 10 ALIGNMENT 629 YS2-10m02.q1k chr12 121 1189 1062293 1063365 F 1069 87.75 1264 reject_low 2 ALIGNMENT 0 YS2-10m02.q1k chr12 62 120 1062293 1062292 F 59 0.00 1264 reject_low 2 ALIGNMENT 790 YS2-10m02.p1k chr01 30 1197 1701 2872 F 1168 90.33 1215 accept 0 ALIGNMENT 0 YS2-10m02.q1k chr15 120 62 12539 12538 C 59 0.00 1264 reject_low 8 ALIGNMENT 0 YS2-10m02.p1k chr12 62 1002 13974 13973 F 941 0.00 1215 reject_low 29 ALIGNMENT 681 YS2-10m02.p1k chr10 30 1094 8667 9740 F 1065 89.01 1215 reject_low 4 ALIGNMENT 653 YS2-10m02.p1k chr02 30 962 7505 8445 F 933 91.10 1215 reject_low 6 ALIGNMENT 520 YS2-10m02.q1k chr11 1103 121 1816 2809 C 983 85.25 1264 reject_low 7 ALIGNMENT 341 YS2-10m02.p1k chr15 922 68 1082398 1083268 C 855 81.29 1215 reject_low 13 ALIGNMENT 0 YS2-10m02.q1k chr03 62 721 289999 289998 F 660 0.00 1264 reject_low 28 ALIGNMENT 62 YS2-10m02.p1k chr03 521 324 289999 290193 C 198 79.29 1215 reject_low 27 ALIGNMENT 494 YS2-10m02.p1k chr03 1094 39 307192 308260 C 1056 83.71 1215 reject_low 10 ALIGNMENT 0 YS2-10m02.p1k chr01 505 854 177031 177030 F 350 0.00 1215 reject_low 25 ALIGNMENT 483 YS2-10m02.q1k chr15 1189 121 11461 12538 C 1069 83.35 1264 reject_low 8 ALIGNMENT 285 YS2-10m03.p1k chr04 31 363 124515 124848 F 333 95.80 1254 reject_low 1 ALIGNMENT 973 YS2-10m03.p1k chr04 26 1207 220305 221498 F 1182 95.18 1254 accept 0 ALIGNMENT 0 YS2-10m03.p1k chr04 364 880 124848 124847 F 517 0.00 1254 reject_low 1 ALIGNMENT 937 YS2-10m03.q1k chr04 1152 39 220473 221602 C 1114 95.87 1278 accept 0 ALIGNMENT 954 YS2-10m05.q1k chr11 40 1148 530658 531782 F 1109 96.57 1276 accept 0 ALIGNMENT 1054 YS2-10m05.p1k chr11 1250 31 535953 537178 C 1220 96.56 1301 accept 0 ALIGNMENT 65 YS2-10m06.q1k vc_4 238 304 1548 1614 F 67 100.00 921 reject_vc 3 ALIGNMENT 302 YS2-10m06.q1k vc_3 1 303 2689 2991 F 303 100.00 921 reject_low 7 ALIGNMENT 0 YS2-10m06.q1k vc_1 304 469 2991 2990 F 166 0.00 921 reject_low 5 ALIGNMENT 0 YS2-10m06.q1k vc_4 237 62 6340 6339 C 176 0.00 921 reject_low 10 ALIGNMENT 0 YS2-10m06.q1k vc_4 469 305 47 46 C 165 0.00 921 reject_low 9 ALIGNMENT 65 YS2-10m06.q1k vc_4 304 238 6273 6339 C 67 100.00 921 reject_low 10 ALIGNMENT 51 YS2-10m06.q1k vc_7 54 3 6360 6411 C 52 100.00 921|1,0 reject_low 8 ALIGNMENT 0 YS2-10m06.q1k vc_4 469 422 5233 5232 C 48 0.00 921 reject_low 4 ALIGNMENT 0 YS2-10m06.q1k vc_7 53 54 5172 6360 C 0 0.00 921 reject_low 8 ALIGNMENT 0 YS2-10m06.q1k vc_4 237 62 113 112 C 176 0.00 921 reject_low 9 ALIGNMENT 0 YS2-10m06.q1k vc_4 469 305 6274 6273 C 165 0.00 921 reject_low 10 ALIGNMENT 115 YS2-10m06.q1k vc_7 421 305 4583 4699 C 117 100.00 921 reject_low 8 ALIGNMENT 0 YS2-10m06.q1k vc_3 304 469 2991 2990 F 166 0.00 921 reject_low 7 ALIGNMENT 0 YS2-10m06.q1k vc_4 305 307 1615 1878 F 3 0.00 921 reject_vc 3 ALIGNMENT 0 YS2-10m06.p1k chr05 198 216 285640 285639 F 19 0.00 216 accept 2 ALIGNMENT 65 YS2-10m06.q1k vc_4 304 238 46 112 C 67 100.00 921 reject_low 9 ALIGNMENT 302 YS2-10m06.q1k vc_1 1 303 2689 2991 F 303 100.00 921 reject_low 5 ALIGNMENT 165 YS2-10m06.p1k chr05 32 197 285475 285640 F 166 100.00 216 accept 2 ALIGNMENT 0 YS2-10m06.q1k vc_7 469 422 4584 4583 C 48 0.00 921 reject_low 8 ALIGNMENT 696 YS2-10m06.q1k vc_7 916 1 1650 2569 C 916 92.69 921 reject_vc 0 ALIGNMENT 384 YS2-10m06.q1k vc_4 308 897 1879 2470 F 590 89.32 921 reject_vc 3 ALIGNMENT 0 YS2-10m06.q1k vc_2 304 469 2624 2623 F 166 0.00 921 reject_low 6 ALIGNMENT 413 YS2-10m06.q1k vc_4 421 1 5232 5654 C 421 99.52 921 reject_low 4 ALIGNMENT 696 YS2-10m06.q1k vc_5 1 897 2556 3454 F 897 93.09 921 reject_vc 1 ALIGNMENT 0 YS2-10m06.q1k vc_7 304 304 4700 4921 C 1 0.00 921 reject_low 8 ALIGNMENT 302 YS2-10m06.q1k vc_2 1 303 2322 2624 F 303 100.00 921 reject_low 6 ALIGNMENT 247 YS2-10m06.q1k vc_7 303 53 4922 5172 C 251 99.60 921|0,1 reject_low 8 ALIGNMENT 0 YS2-10m06.q1k vc_4 62 237 1548 1547 F 176 0.00 921 reject_vc 3 ALIGNMENT 926 YS2-10m07.p1k vc_6 67 1199 5263 6410 F 1133 94.44 1294 reject_vc 0 ALIGNMENT 0 YS2-10m07.p1k scplasm1 816 919 6318 6317 F 104 0.00 1294 reject_low 1 ALIGNMENT 160 YS2-10m07.q1k vc_6 271 1 5727 6012 C 271 87.82 410 reject_vc 0 ALIGNMENT 0 YS2-10m07.p1k scplasm1 62 815 1 0 F 754 0.00 1294 reject_low 2 ALIGNMENT 206 YS2-10m07.p1k scplasm1 816 1199 1 399 F 384 83.85 1294 reject_low 2 ALIGNMENT 753 YS2-10m07.p1k scplasm1 33 815 5536 6318 F 783 99.87 1294 reject_low 1 ALIGNMENT 159 YS2-10m07.q1k scplasm1 271 2 6034 6318 C 270 87.78 410 reject_low 1 ALIGNMENT 1014 YS2-10m08.p1k chr02 35 1262 369012 370242 F 1228 95.77 1313 accept 0 ALIGNMENT 1004 YS2-10m08.q1k chr02 1242 39 369446 370672 C 1204 96.10 1331 accept 0 ALIGNMENT 0 YS2-10m09.p1k chr13 81 887 21997 21996 F 807 0.00 1336 reject_low 1 ALIGNMENT 0 YS2-10m09.q1k chr12 364 363 877701 877731 F 0 0.00 1335 accept 0 ALIGNMENT 309 YS2-10m09.q1k chr12 33 364 877370 877701 F 332 98.80 1335|0,1 accept 0 ALIGNMENT 988 YS2-10m09.p1k chr12 1206 44 880793 881969 C 1163 96.13 1336 accept 0 ALIGNMENT 645 YS2-10m09.q1k chr12 362 1172 877730 878538 F 811 93.22 1335|2,0 accept 0 ALIGNMENT 20 YS2-10m09.p1k chr13 43 80 21960 21997 F 38 94.74 1336 reject_low 1 ALIGNMENT 1048 YS2-10m11.p1k chr15 1298 28 759593 760869 C 1271 95.20 1339 accept 0 ALIGNMENT 1000 YS2-10m11.q1k chr15 39 1158 759509 760636 F 1120 97.32 1297 accept 0 ALIGNMENT 631 YS2-10m13.q1k chr07 703 39 704003 704665 C 665 99.55 704 accept_chi 0 ALIGNMENT 630 YS2-10m13.p1k chr07 29 691 704003 704665 F 663 99.55 710 accept_chi 1 ALIGNMENT 0 YS2-10m13.p1k chr07 692 710 704665 704664 F 19 0.00 710 accept_chi 1 ALIGNMENT 992 YS2-10m15.p1k chr04 1129 27 867648 868762 C 1103 97.55 1290 accept 0 ALIGNMENT 1018 YS2-10m15.q1k chr04 40 1223 863368 864564 F 1184 96.03 1301 accept 0 ALIGNMENT 0 YS2-10m16.p1k chr10 853 62 197835 197834 C 792 0.00 1314 reject_low 6 ALIGNMENT 0 YS2-10m16.p1k chr08 853 62 85906 85905 C 792 0.00 1314 reject_low 10 ALIGNMENT 0 YS2-10m16.p1k chr16 62 853 436887 436886 F 792 0.00 1314 reject_low 3 ALIGNMENT 197 YS2-10m16.p1k chr02 854 1194 643483 643837 F 341 87.98 1314 reject_low 11 ALIGNMENT 921 YS2-10m16.q1k chr16 1152 40 439802 440915 C 1113 95.96 1344 reject_low 3 ALIGNMENT 0 YS2-10m16.p1k chr14 851 62 561981 561980 C 790 0.00 1314 reject_low 8 ALIGNMENT 0 YS2-10m16.p1k chr04 853 62 437516 437515 C 792 0.00 1314 reject_low 16 ALIGNMENT 209 YS2-10m16.p1k chr13 1194 854 503786 504140 C 341 89.15 1314 reject_low 7 ALIGNMENT 0 YS2-10m16.p1k chr07 62 853 931174 931173 F 792 0.00 1314 reject_low 17 ALIGNMENT 0 YS2-10m16.p1k chr02 62 849 35844 35843 F 788 0.00 1314 reject_low 4 ALIGNMENT 197 YS2-10m16.p1k chr08 1194 854 91403 91757 C 341 87.98 1314 reject_low 2 ALIGNMENT 949 YS2-10m16.q1k chr10 40 1194 199662 200818 F 1155 95.76 1344 reject_low 1 ALIGNMENT 175 YS2-10m16.p1k chr04 1194 854 437162 437515 C 341 86.22 1314 reject_low 16 ALIGNMENT 197 YS2-10m16.p1k chr16 854 1194 436887 437241 F 341 87.98 1314 reject_low 3 ALIGNMENT 200 YS2-10m16.p1k chr07 1194 854 110875 111229 C 341 88.27 1314 reject_low 9 ALIGNMENT 209 YS2-10m16.p1k chr09 854 1194 196650 197004 F 341 89.15 1314 reject_low 5 ALIGNMENT 175 YS2-10m16.p1k chr07 854 1194 931174 931527 F 341 86.22 1314 reject_low 17 ALIGNMENT 0 YS2-10m16.p1k chr05 62 851 354354 354353 F 790 0.00 1314 reject_low 14 ALIGNMENT 0 YS2-10m16.p1k chr16 62 853 442739 442738 F 792 0.00 1314 reject_low 12 ALIGNMENT 0 YS2-10m16.p1k chr13 62 853 808536 808535 F 792 0.00 1314 reject_low 15 ALIGNMENT 197 YS2-10m16.p1k chr16 854 1194 442739 443093 F 341 87.98 1314 reject_low 12 ALIGNMENT 209 YS2-10m16.p1k chr10 1194 854 197480 197834 C 341 89.15 1314 reject_low 6 ALIGNMENT 0 YS2-10m16.p1k chr08 853 62 91758 91757 C 792 0.00 1314 reject_low 2 ALIGNMENT 0 YS2-10m16.p1k chr10 853 62 203690 203689 C 792 0.00 1314 reject_low 1 ALIGNMENT 194 YS2-10m16.p1k chr14 851 1194 632118 632475 F 344 87.50 1314 reject_low 13 ALIGNMENT 199 YS2-10m16.p1k chr14 1194 852 561624 561980 C 343 88.05 1314 reject_low 8 ALIGNMENT 200 YS2-10m16.p1k chr08 1194 854 85551 85905 C 341 88.27 1314 reject_low 10 ALIGNMENT 0 YS2-10m16.p1k chr14 62 850 632118 632117 F 789 0.00 1314 reject_low 13 ALIGNMENT 0 YS2-10m16.p1k chr15 933 62 704064 704063 C 872 0.00 1314 reject_low 18 ALIGNMENT 921 YS2-10m16.q1k chr08 40 1152 87730 88843 F 1113 95.96 1344 reject_low 2 ALIGNMENT 190 YS2-10m16.p1k chr05 852 1194 354354 354710 F 343 87.17 1314 reject_low 14 ALIGNMENT 187 YS2-10m16.p1k chr13 854 1194 808536 808889 F 341 87.39 1314 reject_low 15 ALIGNMENT 213 YS2-10m16.p1k chr02 850 1194 35844 36202 F 345 89.28 1314 reject_low 4 ALIGNMENT 133 YS2-10m16.p1k chr15 1194 934 703789 704063 C 261 86.59 1314 reject_low 18 ALIGNMENT 787 YS2-10m16.p1k chr05 853 30 432147 432972 C 824 99.51 1314 accept 0 ALIGNMENT 209 YS2-10m16.p1k chr10 1194 854 203335 203689 C 341 89.15 1314 reject_low 1 ALIGNMENT 0 YS2-10m16.p1k chr02 62 853 643483 643482 F 792 0.00 1314 reject_low 11 ALIGNMENT 0 YS2-10m16.p1k chr09 62 853 196650 196649 F 792 0.00 1314 reject_low 5 ALIGNMENT 0 YS2-10m16.p1k chr07 853 62 111230 111229 C 792 0.00 1314 reject_low 9 ALIGNMENT 0 YS2-10m16.p1k chr13 853 62 504141 504140 C 792 0.00 1314 reject_low 7 ALIGNMENT 1045 YS2-10m17.p1k chr04 1206 35 1031446 1032624 C 1172 97.61 1318 accept 0 ALIGNMENT 945 YS2-10m17.q1k chr04 41 1150 1028601 1029724 F 1110 95.77 1266 accept 0 ALIGNMENT 1002 YS2-10m18.p1k chr07 1223 30 46071 47275 C 1194 96.40 1314 accept 0 ALIGNMENT 999 YS2-10m18.q1k chr07 30 1217 42627 43826 F 1188 96.72 1281 accept 0 ALIGNMENT 42 YS2-10m20.q1k vc_3 223 182 2472 2513 C 42 100.00 223 reject_low 2 ALIGNMENT 0 YS2-10m20.q1k vc_1 181 62 2514 2513 C 120 0.00 223 reject_low 1 ALIGNMENT 42 YS2-10m20.q1k vc_1 223 182 2472 2513 C 42 100.00 223 reject_low 1 ALIGNMENT 42 YS2-10m20.q1k vc_4 182 223 5830 5871 F 42 100.00 223 reject_low 3 ALIGNMENT 39 YS2-10m20.q1k vc_5 223 185 5025 5063 C 39 100.00 223 reject_low 4 ALIGNMENT 0 YS2-10m20.q1k vc_5 184 62 5064 5063 C 123 0.00 223 reject_low 4 ALIGNMENT 0 YS2-10m20.q1k vc_5 184 62 37 36 C 123 0.00 223 reject_low 6 ALIGNMENT 147 YS2-10m20.q1k chr05 182 32 72752 72902 C 151 99.34 223 accept 0 ALIGNMENT 38 YS2-10m20.q1k vc_7 186 223 13525 13562 F 38 100.00 223 reject_low 5 ALIGNMENT 0 YS2-10m20.q1k chr05 223 183 72753 72752 C 41 0.00 223 accept 0 ALIGNMENT 0 YS2-10m20.q1k vc_7 62 185 13525 13524 F 124 0.00 223 reject_low 5 ALIGNMENT 0 YS2-10m20.q1k vc_4 62 181 5830 5829 F 120 0.00 223 reject_low 3 ALIGNMENT 36 YS2-10m20.q1k vc_5 220 185 1 36 C 36 100.00 223 reject_low 6 ALIGNMENT 0 YS2-10m20.q1k vc_3 181 62 2514 2513 C 120 0.00 223 reject_low 2 ALIGNMENT 41 YS2-10m21.q1k vc_3 335 295 2472 2512 C 41 100.00 335 reject_low 3 ALIGNMENT 36 YS2-10m21.q1k vc_5 332 297 1 36 C 36 100.00 335 reject_low 7 ALIGNMENT 41 YS2-10m21.q1k vc_1 335 295 2472 2512 C 41 100.00 335 reject_low 2 ALIGNMENT 257 YS2-10m21.q1k chr12 294 30 288970 289234 C 265 100.00 335 accept_chi 1 ALIGNMENT 0 YS2-10m21.q1k vc_5 296 62 5064 5063 C 235 0.00 335 reject_low 5 ALIGNMENT 0 YS2-10m21.q1k vc_5 296 62 37 36 C 235 0.00 335 reject_low 7 ALIGNMENT 39 YS2-10m21.q1k vc_5 335 297 5025 5063 C 39 100.00 335 reject_low 5 ALIGNMENT 41 YS2-10m21.q1k vc_4 295 335 5831 5871 F 41 100.00 335 reject_low 4 ALIGNMENT 0 YS2-10m21.q1k vc_4 62 294 5831 5830 F 233 0.00 335 reject_low 4 ALIGNMENT 0 YS2-10m21.p1k chr12 299 313 289238 289237 F 15 0.00 313 accept_chi 0 ALIGNMENT 38 YS2-10m21.q1k vc_7 298 335 13525 13562 F 38 100.00 335 reject_low 6 ALIGNMENT 258 YS2-10m21.p1k chr12 30 298 288970 289238 F 269 99.63 313 accept_chi 0 ALIGNMENT 0 YS2-10m21.q1k vc_1 294 62 2513 2512 C 233 0.00 335 reject_low 2 ALIGNMENT 0 YS2-10m21.q1k vc_7 62 297 13525 13524 F 236 0.00 335 reject_low 6 ALIGNMENT 0 YS2-10m21.q1k chr12 335 295 288971 288970 C 41 0.00 335 accept_chi 1 ALIGNMENT 0 YS2-10m21.q1k vc_3 294 62 2513 2512 C 233 0.00 335 reject_low 3 ALIGNMENT 0 YS2-10m22.p1k chr07 888 294 1081615 1081614 C 595 0.00 1283 reject_low 7 ALIGNMENT 219 YS2-10m22.p1k chr02 295 32 810356 810620 C 264 95.45 1283 reject_low 3 ALIGNMENT 0 YS2-10m22.p1k chr08 289 888 7516 7515 F 600 0.00 1283 reject_low 9 ALIGNMENT 157 YS2-10m22.p1k chr08 32 288 7259 7516 F 257 88.33 1283 reject_low 9 ALIGNMENT 157 YS2-10m22.p1k chr09 288 32 437060 437317 C 257 88.33 1283 reject_low 10 ALIGNMENT 254 YS2-10m22.p1k chr02 531 873 75850 76192 F 343 92.13 1283 accept 0 ALIGNMENT 0 YS2-10m22.p1k chr09 888 289 437061 437060 C 600 0.00 1283 reject_low 10 ALIGNMENT 0 YS2-10m22.p1k chr04 325 888 2955 2954 F 564 0.00 1283 reject_low 1 ALIGNMENT 216 YS2-10m22.p1k chr06 32 293 7279 7541 F 262 95.42 1283 reject_low 5 ALIGNMENT 0 YS2-10m22.p1k chr13 296 888 8361 8360 F 593 0.00 1283 reject_low 4 ALIGNMENT 0 YS2-10m22.p1k chr02 888 296 810357 810356 C 593 0.00 1283 reject_low 3 ALIGNMENT 0 YS2-10m22.p1k chr14 294 888 9451 9450 F 595 0.00 1283 reject_low 6 ALIGNMENT 226 YS2-10m22.p1k chr10 324 32 742761 743055 C 293 93.52 1283 reject_low 2 ALIGNMENT 210 YS2-10m22.p1k chr14 32 293 9189 9451 F 262 94.66 1283 reject_low 6 ALIGNMENT 177 YS2-10m22.p1k chr11 38 289 15429 15680 F 252 91.27 1283 reject_low 8 ALIGNMENT 0 YS2-10m22.p1k chr10 888 325 742762 742761 C 564 0.00 1283 reject_low 2 ALIGNMENT 0 YS2-10m22.p1k chr11 290 888 15680 15679 F 599 0.00 1283 reject_low 8 ALIGNMENT 219 YS2-10m22.p1k chr13 32 295 8097 8361 F 264 95.45 1283 reject_low 4 ALIGNMENT 226 YS2-10m22.p1k chr04 32 324 2661 2955 F 293 93.52 1283 reject_low 1 ALIGNMENT 0 YS2-10m22.p1k chr06 294 888 7541 7540 F 595 0.00 1283 reject_low 5 ALIGNMENT 0 YS2-10m22.p1k chr02 874 888 76192 76191 F 15 0.00 1283 accept 0 ALIGNMENT 0 YS2-10m22.p1k chr02 62 530 75850 75849 F 469 0.00 1283 accept 0 ALIGNMENT 204 YS2-10m22.p1k chr07 293 32 1081614 1081876 C 262 93.89 1283 reject_low 7 ALIGNMENT 0 YS2-10m24.q1k chr02 754 886 744636 744635 F 133 0.00 1202 reject_low 1 ALIGNMENT 0 YS2-10m24.q1k chr11 62 748 434970 434969 F 687 0.00 1202 accept 0 ALIGNMENT 1000 YS2-10m24.p1k chr11 1125 31 435029 436127 C 1095 97.81 1253 accept 0 ALIGNMENT 339 YS2-10m24.q1k chr11 749 1191 434970 435421 F 443 93.68 1202 accept 0 ALIGNMENT 675 YS2-10m24.q1k chr02 37 753 743921 744636 F 717 98.74 1202 reject_low 1 ALIGNMENT 989 YS2-10n01.p1k chr14 30 1230 760582 761768 F 1201 96.17 1236 accept 0 ALIGNMENT 1013 YS2-10n01.q1k chr14 1214 42 761194 762376 C 1173 95.82 1261 accept 0 ALIGNMENT 302 YS2-10n02.q1k chr12 507 42 392679 393137 C 466 90.99 1565 accept 0 ALIGNMENT 988 YS2-10n04.p1k chr12 34 1204 388109 389290 F 1171 95.47 1252 accept 0 ALIGNMENT 744 YS2-10n04.q1k chr12 1095 33 392064 393139 C 1063 91.72 1242 accept 0 ALIGNMENT 614 YS2-10n05.q1k chr07 972 41 33290 34215 C 932 90.34 1361 accept_chi 1 ALIGNMENT 988 YS2-10n05.p1k chr14 29 1177 760582 761748 F 1149 96.87 1266 accept_chi 0 ALIGNMENT 529 YS2-10n06.q1k chr04 761 37 371150 371869 C 725 92.14 1304 accept 0 ALIGNMENT 937 YS2-10n06.p1k chr04 39 1095 366775 367847 F 1057 96.59 1245 accept 0 ALIGNMENT 851 YS2-10n07.p1k chr09 30 978 72617 73579 F 949 97.37 1228 accept 0 ALIGNMENT 922 YS2-10n07.q1k chr09 1160 40 74786 75901 C 1121 95.45 1266 accept 0 ALIGNMENT 961 YS2-10n08.p1k chr09 30 1139 72617 73740 F 1110 96.31 1289 accept 0 ALIGNMENT 991 YS2-10n08.q1k chr09 1202 36 74749 75901 C 1167 96.57 1360 accept 0 ALIGNMENT 654 YS2-10n09.q1k chr04 842 33 1241946 1242748 C 810 95.06 1228 accept 0 ALIGNMENT 945 YS2-10n09.p1k chr04 34 1258 1238037 1239297 F 1225 93.63 1352 accept 0 ALIGNMENT 951 YS2-10n10.p1k chr13 1162 28 380694 381842 C 1135 95.33 1325 accept_trans 0 ALIGNMENT 768 YS2-10n10.q1k chr13 40 919 370854 371729 F 880 97.16 1217 accept_trans 0 ALIGNMENT 183 YS2-10n13.p1k chr12 364 1077 35527 36228 F 714 76.19 1336 reject_low 1 ALIGNMENT 509 YS2-10n13.q1k chr16 36 735 919817 920513 F 700 91.71 1290 accept 0 ALIGNMENT 1019 YS2-10n13.p1k chr16 1177 31 921881 923034 C 1147 96.69 1336 accept 0 ALIGNMENT 0 YS2-10n13.p1k chr12 62 363 35527 35526 F 302 0.00 1336 reject_low 1 ALIGNMENT 0 YS2-10n15.q1k vc_7 62 841 63 62 F 780 0.00 1323 reject_low 21 ALIGNMENT 747 YS2-10n15.q1k chr06 837 46 71958 72750 C 792 98.99 1323 accept_chi 1 ALIGNMENT 0 YS2-10n15.q1k vc_7 1088 1089 5172 6360 C 0 0.00 1323 reject_low 16 ALIGNMENT 39 YS2-10n15.q1k vc_5 879 841 5025 5063 C 39 100.00 1323 reject_low 20 ALIGNMENT 265 YS2-10n15.p1k vc_3 1272 850 1674 2105 C 423 88.89 1325 reject_low 6 ALIGNMENT 256 YS2-10n15.q1k vc_7 1234 879 2369 2727 C 356 91.01 1323 reject_low 3 ALIGNMENT 256 YS2-10n15.q1k vc_1 879 1234 2531 2889 F 356 91.01 1323 reject_low 9 ALIGNMENT 0 YS2-10n15.p1k vc_3 849 62 2473 2472 C 788 0.00 1325 reject_low 25 ALIGNMENT 42 YS2-10n15.q1k vc_7 1089 1039 6360 6411 C 51 94.12 1323|1,0 reject_low 16 ALIGNMENT 0 YS2-10n15.q1k vc_5 840 62 37 36 C 779 0.00 1323 reject_low 23 ALIGNMENT 36 YS2-10n15.q1k vc_5 876 841 1 36 C 36 100.00 1323 reject_low 23 ALIGNMENT 265 YS2-10n15.p1k vc_2 1272 850 1674 2105 C 423 88.89 1325 reject_low 5 ALIGNMENT 0 YS2-10n15.q1k vc_3 62 878 2531 2530 F 817 0.00 1323 reject_low 11 ALIGNMENT 41 YS2-10n15.q1k vc_2 879 839 2105 2145 C 41 100.00 1323 reject_low 18 ALIGNMENT 0 YS2-10n15.q1k vc_7 1038 62 6412 6411 C 977 0.00 1323 reject_low 16 ALIGNMENT 0 YS2-10n15.q1k vc_1 62 878 2531 2530 F 817 0.00 1323 reject_low 9 ALIGNMENT 0 YS2-10n15.q1k vc_4 880 879 5872 6353 F 0 0.00 1323 reject_low 14 ALIGNMENT 0 YS2-10n15.p1k vc_5 849 62 5026 5025 C 788 0.00 1325 reject_low 2 ALIGNMENT 38 YS2-10n15.q1k vc_7 842 879 13525 13562 F 38 100.00 1323 reject_low 22 ALIGNMENT 256 YS2-10n15.q1k vc_5 879 1234 2398 2756 F 356 91.01 1323 reject_low 2 ALIGNMENT 265 YS2-10n15.p1k vc_7 850 1272 13562 13993 F 423 89.13 1325 reject_low 7 ALIGNMENT 0 YS2-10n15.q1k vc_2 62 878 2164 2163 F 817 0.00 1323 reject_low 10 ALIGNMENT 0 YS2-10n15.p1k vc_3 849 62 2106 2105 C 788 0.00 1325 reject_low 6 ALIGNMENT 0 YS2-10n15.p1k vc_7 62 849 100 99 F 788 0.00 1325 reject_low 3 ALIGNMENT 0 YS2-10n15.q1k vc_4 62 878 126 125 F 817 0.00 1323 reject_low 13 ALIGNMENT 70 YS2-10n15.q1k vc_7 1234 1088 5024 5172 C 147 83.67 1323|0,1 reject_low 16 ALIGNMENT 0 YS2-10n15.p1k vc_7 62 849 13562 13561 F 788 0.00 1325 reject_low 7 ALIGNMENT 26 YS2-10n15.p1k vc_1 880 850 2441 2472 C 31 96.77 1325 reject_low 24 ALIGNMENT 0 YS2-10n15.q1k vc_4 878 62 5813 5812 C 817 0.00 1323 reject_low 12 ALIGNMENT 144 YS2-10n15.q1k vc_4 879 1040 6353 6514 F 162 96.30 1323|1,0 reject_low 14 ALIGNMENT 0 YS2-10n15.q1k vc_2 838 62 2146 2145 C 777 0.00 1323 reject_low 18 ALIGNMENT 265 YS2-10n15.p1k vc_1 1272 850 1674 2105 C 423 88.89 1325 reject_low 4 ALIGNMENT 84 YS2-10n15.q1k vc_4 967 879 1446 1534 C 89 97.75 1323 reject_low 15 ALIGNMENT 0 YS2-10n15.q1k vc_1 838 62 2513 2512 C 777 0.00 1323 reject_low 17 ALIGNMENT 0 YS2-10n15.p1k vc_2 849 62 2106 2105 C 788 0.00 1325 reject_low 5 ALIGNMENT 0 YS2-10n15.q1k vc_3 838 62 2513 2512 C 777 0.00 1323 reject_low 19 ALIGNMENT 0 YS2-10n15.q1k chr06 878 838 71959 71958 C 41 0.00 1323 accept_chi 1 ALIGNMENT 144 YS2-10n15.q1k vc_4 879 1040 126 287 F 162 96.30 1323 reject_low 13 ALIGNMENT 0 YS2-10n15.p1k vc_1 849 62 2473 2472 C 788 0.00 1325 reject_low 24 ALIGNMENT 0 YS2-10n15.p1k vc_1 849 62 2106 2105 C 788 0.00 1325 reject_low 4 ALIGNMENT 0 YS2-10n15.p1k chr06 833 887 72760 72759 F 55 0.00 1325 accept_chi 0 ALIGNMENT 0 YS2-10n15.q1k vc_7 878 62 2728 2727 C 817 0.00 1323 reject_low 3 ALIGNMENT 0 YS2-10n15.q1k vc_5 840 62 5064 5063 C 779 0.00 1323 reject_low 20 ALIGNMENT 0 YS2-10n15.p1k vc_4 62 849 5871 5870 F 788 0.00 1325 reject_low 8 ALIGNMENT 0 YS2-10n15.q1k vc_7 62 841 13525 13524 F 780 0.00 1323 reject_low 22 ALIGNMENT 0 YS2-10n15.q1k vc_5 62 878 2398 2397 F 817 0.00 1323 reject_low 2 ALIGNMENT 38 YS2-10n15.q1k vc_7 842 879 63 100 F 38 100.00 1323 reject_low 21 ALIGNMENT 757 YS2-10n15.p1k chr06 39 832 71967 72760 F 794 99.24 1325 accept_chi 0 ALIGNMENT 249 YS2-10n15.q1k vc_4 1234 879 5452 5812 C 356 90.45 1323 reject_low 12 ALIGNMENT 41 YS2-10n15.q1k vc_3 879 839 2472 2512 C 41 100.00 1323 reject_low 19 ALIGNMENT 0 YS2-10n15.q1k vc_4 878 62 1535 1534 C 817 0.00 1323 reject_low 15 ALIGNMENT 256 YS2-10n15.q1k vc_2 879 1234 2164 2522 F 356 91.01 1323 reject_low 10 ALIGNMENT 256 YS2-10n15.q1k vc_3 879 1234 2531 2889 F 356 91.01 1323 reject_low 11 ALIGNMENT 265 YS2-10n15.p1k vc_5 1272 850 4594 5025 C 423 88.89 1325 reject_low 2 ALIGNMENT 247 YS2-10n15.p1k vc_4 850 1184 5871 6207 F 335 92.24 1325 reject_low 8 ALIGNMENT 41 YS2-10n15.q1k vc_4 839 879 5831 5871 F 41 100.00 1323 reject_low 14 ALIGNMENT 26 YS2-10n15.p1k vc_3 880 850 2441 2472 C 31 96.77 1325 reject_low 25 ALIGNMENT 0 YS2-10n15.q1k vc_4 62 838 5831 5830 F 777 0.00 1323 reject_low 14 ALIGNMENT 265 YS2-10n15.p1k vc_7 850 1272 100 531 F 423 89.13 1325 reject_low 3 ALIGNMENT 41 YS2-10n15.q1k vc_1 879 839 2472 2512 C 41 100.00 1323 reject_low 17 ALIGNMENT 0 YS2-10n18.p1k chr12 420 62 661929 661928 C 359 0.00 1331 reject_low 1 ALIGNMENT 1077 YS2-10n18.p1k chr06 29 1285 174781 176048 F 1257 95.86 1331 accept 0 ALIGNMENT 161 YS2-10n18.p1k chr12 913 421 661436 661928 C 493 77.89 1331 reject_low 1 ALIGNMENT 1007 YS2-10n20.q1k chr12 40 1160 451702 452832 F 1121 97.41 1264 accept 0 ALIGNMENT 0 YS2-10n20.p1k chr12 286 62 490544 490543 C 225 0.00 1321 reject_low 3 ALIGNMENT 716 YS2-10n20.p1k chr12 1072 287 489754 490543 C 786 97.20 1321 reject_low 3 ALIGNMENT 1023 YS2-10n20.p1k chr12 1153 29 460841 461971 C 1125 97.33 1321 accept 1 ALIGNMENT 1007 YS2-10n20.q1k chr12 40 1160 460839 461969 F 1121 97.41 1264 accept 1 ALIGNMENT 1023 YS2-10n20.p1k chr12 1153 29 451704 452834 C 1125 97.33 1321 accept 0 ALIGNMENT 0 YS2-10n20.q1k chr12 62 123 489754 489753 F 62 0.00 1264 reject_low 2 ALIGNMENT 757 YS2-10n20.q1k chr12 124 914 489754 490543 F 791 98.86 1264 reject_low 2 ALIGNMENT 23 YS2-10n21.p1k chr05 181 204 208811 208834 F 24 100.00 239 reject_low 2 ALIGNMENT 40 YS2-10n21.q1k vc_5 266 224 5025 5067 C 43 97.67 266 reject_low 6 ALIGNMENT 41 YS2-10n21.q1k vc_3 266 226 2472 2512 C 41 100.00 266 reject_low 4 ALIGNMENT 41 YS2-10n21.q1k vc_1 266 226 2472 2512 C 41 100.00 266 reject_low 3 ALIGNMENT 41 YS2-10n21.q1k vc_4 226 266 5831 5871 F 41 100.00 266 reject_low 5 ALIGNMENT 0 YS2-10n21.q1k vc_5 223 62 41 40 C 162 0.00 266 reject_low 8 ALIGNMENT 0 YS2-10n21.q1k vc_3 225 62 2513 2512 C 164 0.00 266 reject_low 4 ALIGNMENT 37 YS2-10n21.q1k vc_5 263 224 1 40 C 40 97.50 266 reject_low 8 ALIGNMENT 170 YS2-10n21.p1k chr05 222 32 208793 208983 C 191 98.43 239 accept_chi 1 ALIGNMENT 0 YS2-10n21.q1k chr05 227 266 208983 208982 F 40 0.00 266 accept_chi 0 ALIGNMENT 163 YS2-10n21.q1k chr05 38 226 208793 208983 F 189 97.35 266 accept_chi 0 ALIGNMENT 0 YS2-10n21.p1k chr05 205 239 208834 208833 F 35 0.00 239 reject_low 2 ALIGNMENT 38 YS2-10n21.q1k vc_7 229 266 13525 13562 F 38 100.00 266 reject_low 7 ALIGNMENT 0 YS2-10n21.p1k chr05 239 223 208794 208793 C 17 0.00 239 accept_chi 1 ALIGNMENT 0 YS2-10n21.q1k vc_7 62 228 13525 13524 F 167 0.00 266 reject_low 7 ALIGNMENT 0 YS2-10n21.q1k vc_1 225 62 2513 2512 C 164 0.00 266 reject_low 3 ALIGNMENT 0 YS2-10n21.q1k vc_4 62 225 5831 5830 F 164 0.00 266 reject_low 5 ALIGNMENT 0 YS2-10n21.q1k vc_5 223 62 5068 5067 C 162 0.00 266 reject_low 6 ALIGNMENT 0 YS2-10n21.p1k chr05 62 180 208811 208810 F 119 0.00 239 reject_low 2 ALIGNMENT 969 YS2-10n22.q1k chr12 41 1158 714523 715653 F 1118 96.87 1211 accept 0 ALIGNMENT 1013 YS2-10n22.p1k chr12 1240 32 717555 718770 C 1209 96.11 1284 accept 0 ALIGNMENT 237 YS2-10n23.p1k chr03 17 364 27289 27636 F 348 89.94 1274 ambiguous_tel 0 ALIGNMENT 150 YS2-10n23.q1k vc_2 673 1036 2253 2621 F 364 80.49 1240 reject_vc 2 ALIGNMENT 157 YS2-10n23.q1k chr03 545 163 27234 27616 C 383 82.25 1240 ambiguous_tel 1 ALIGNMENT 0 YS2-10n23.q1k vc_2 302 672 2253 2252 F 371 0.00 1240 reject_vc 2 ALIGNMENT 0 YS2-10n24.p1k chr13 551 439 609813 609823 C 113 0.00 1177 reject_low 18 ALIGNMENT 0 YS2-10n24.p1k chr13 813 62 609860 609859 C 752 0.00 1177 reject_low 12 ALIGNMENT 48 YS2-10n24.p1k chr13 885 658 608982 609205 C 228 76.32 1177 reject_low 6 ALIGNMENT 977 YS2-10n24.q1k chr13 44 1142 605801 606902 F 1099 96.91 1142 accept 0 ALIGNMENT 61 YS2-10n24.p1k chr13 228 67 609677 609835 C 162 80.86 1177 reject_low 17 ALIGNMENT 0 YS2-10n24.p1k chr13 96 62 609806 609805 C 35 0.00 1177 reject_low 11 ALIGNMENT 0 YS2-10n24.p1k chr13 171 172 608984 609388 C 0 0.00 1177 reject_low 10 ALIGNMENT 0 YS2-10n24.p1k chr13 737 121 609360 609358 C 617 0.00 1177 reject_low 7 ALIGNMENT 39 YS2-10n24.p1k chr13 889 814 609782 609859 C 76 85.53 1177 reject_low 12 ALIGNMENT 22 YS2-10n24.p1k chr13 515 457 609303 609361 C 59 79.66 1177 reject_low 16 ALIGNMENT 0 YS2-10n24.p1k chr13 870 841 609507 609571 C 30 0.00 1177 reject_low 4 ALIGNMENT 26 YS2-10n24.p1k chr13 119 88 609027 609058 C 32 93.75 1177 reject_low 15 ALIGNMENT 29 YS2-10n24.p1k chr13 842 766 609780 609853 C 77 81.82 1177 reject_low 13 ALIGNMENT 73 YS2-10n24.p1k chr13 252 173 609731 609810 C 80 97.50 1177 reject_low 14 ALIGNMENT 22 YS2-10n24.p1k chr13 689 664 609777 609802 C 26 96.15 1177 reject_low 19 ALIGNMENT 0 YS2-10n24.p1k chr13 1035 1006 609388 609638 C 30 0.00 1177 reject_low 12,13,19 ALIGNMENT 0 YS2-10n24.p1k chr13 830 759 609184 609183 C 72 0.00 1177 reject_low 16 ALIGNMENT 0 YS2-10n24.p1k chr13 1035 855 609388 609368 C 181 0.00 1177 reject_low 18 ALIGNMENT 21 YS2-10n24.p1k chr13 1005 940 609639 609704 C 66 71.21 1177 reject_low 12,13,19 ALIGNMENT 46 YS2-10n24.p1k chr13 854 760 609369 609463 C 95 83.16 1177 reject_low 18 ALIGNMENT 0 YS2-10n24.p1k chr13 168 120 608987 609026 C 49 0.00 1177 reject_low 15 ALIGNMENT 43 YS2-10n24.p1k chr13 120 33 609359 609444 C 88 85.23 1177 reject_low 7 ALIGNMENT 78 YS2-10n24.p1k chr13 836 652 609654 609841 C 185 81.62 1177 reject_low 9 ALIGNMENT 374 YS2-10n24.p1k chr13 1069 555 608946 609464 C 515 91.26 1177 reject_low 2 ALIGNMENT 0 YS2-10n24.p1k chr13 939 890 609705 609781 C 50 0.00 1177 reject_low 12 ALIGNMENT 0 YS2-10n24.p1k chr13 830 810 609289 609288 C 21 0.00 1177 reject_low 7 ALIGNMENT 0 YS2-10n24.p1k chr13 680 516 609261 609302 C 165 0.00 1177 reject_low 16 ALIGNMENT 0 YS2-10n24.p1k chr13 717 703 609071 609112 C 15 0.00 1177 reject_low 14,17 ALIGNMENT 0 YS2-10n24.p1k chr13 402 253 609464 609730 C 150 0.00 1177 reject_low 14 ALIGNMENT 40 YS2-10n24.p1k chr13 86 33 609033 609087 C 54 92.59 1177 reject_low 15 ALIGNMENT 154 YS2-10n24.p1k chr13 356 43 608925 609229 C 314 85.67 1177 reject_low 3 ALIGNMENT 0 YS2-10n24.p1k chr13 830 531 608908 608907 C 300 0.00 1177 reject_low 11 ALIGNMENT 25 YS2-10n24.p1k chr13 173 121 609387 609439 C 53 83.02 1177|2,0 reject_low 10 ALIGNMENT 0 YS2-10n24.p1k chr13 657 540 609206 609773 C 118 0.00 1177 reject_low 6 ALIGNMENT 0 YS2-10n24.p1k chr13 830 211 608946 608945 C 620 0.00 1177 reject_low 10,15 ALIGNMENT 0 YS2-10n24.p1k chr13 651 439 609842 609823 C 213 0.00 1177 reject_low 9 ALIGNMENT 25 YS2-10n24.p1k chr13 68 41 609282 609309 C 28 96.43 1177 reject_low 8 ALIGNMENT 43 YS2-10n24.p1k chr13 452 381 609288 609359 C 72 87.50 1177 reject_low 17 ALIGNMENT 165 YS2-10n24.p1k chr13 840 555 609572 609860 C 286 87.41 1177 reject_low 4 ALIGNMENT 0 YS2-10n24.p1k chr13 759 613 609464 609751 C 147 0.00 1177 reject_low 18 ALIGNMENT 22 YS2-10n24.p1k chr13 172 97 609733 609805 C 76 78.95 1177 reject_low 11 ALIGNMENT 0 YS2-10n24.p1k chr13 765 62 609854 609853 C 704 0.00 1177 reject_low 13 ALIGNMENT 0 YS2-10n24.p1k chr13 830 402 609184 609183 C 429 0.00 1177 reject_low 8 ALIGNMENT 48 YS2-10n24.p1k chr13 612 552 609752 609812 C 61 93.44 1177 reject_low 18 ALIGNMENT 480 YS2-10n24.p1k chr13 1073 229 608941 609835 C 845 87.22 1177 reject_low 1 ALIGNMENT 0 YS2-10n24.p1k chr13 554 280 609465 609544 C 275 0.00 1177 reject_low 2 ALIGNMENT 0 YS2-10n24.p1k chr13 408 62 609854 609853 C 347 0.00 1177 reject_low 9,16,18 ALIGNMENT 0 YS2-10n24.p1k chr13 402 62 609809 609808 C 341 0.00 1177 reject_low 5 ALIGNMENT 0 YS2-10n24.p1k chr13 172 62 609811 609810 C 111 0.00 1177 reject_low 14 ALIGNMENT 0 YS2-10n24.p1k chr13 939 843 609705 609779 C 97 0.00 1177 reject_low 13 ALIGNMENT 0 YS2-10n24.p1k chr13 830 357 608926 608925 C 474 0.00 1177 reject_low 3 ALIGNMENT 23 YS2-10n24.p1k chr13 210 169 608945 608986 C 42 85.71 1177|0,3 reject_low 10,15 ALIGNMENT 56 YS2-10n24.p1k chr13 539 457 609774 609859 C 83 90.36 1177 reject_low 6 ALIGNMENT 0 YS2-10n24.p1k chr13 562 62 609907 609906 C 501 0.00 1177 reject_low 19 ALIGNMENT 43 YS2-10n24.p1k chr13 809 738 609288 609359 C 72 87.50 1177 reject_low 7 ALIGNMENT 66 YS2-10n24.p1k chr13 549 403 609317 609463 C 147 82.31 1177 reject_low 14 ALIGNMENT 93 YS2-10n24.p1k chr13 279 33 609545 609789 C 247 81.38 1177 reject_low 2 ALIGNMENT 0 YS2-10n24.p1k chr13 870 661 609507 609544 C 210 0.00 1177 reject_low 5 ALIGNMENT 35 YS2-10n24.p1k chr13 401 324 609183 609260 C 78 82.05 1177 reject_low 8 ALIGNMENT 507 YS2-10n24.p1k chr13 717 33 608945 609633 C 685 92.70 1177 accept 0 ALIGNMENT 65 YS2-10n24.p1k chr13 1030 871 609346 609506 C 160 78.75 1177 reject_low 4,5,9 ALIGNMENT 0 YS2-10n24.p1k chr13 830 786 609004 609003 C 45 0.00 1177 reject_low 14,17 ALIGNMENT 73 YS2-10n24.p1k chr13 660 403 609545 609808 C 258 77.91 1177 reject_low 5 ALIGNMENT 0 YS2-10n24.p1k chr13 555 550 609260 609316 C 6 0.00 1177 reject_low 14 ALIGNMENT 0 YS2-10n24.p1k chr13 870 837 609507 609653 C 34 0.00 1177 reject_low 9 ALIGNMENT 53 YS2-10n24.p1k chr13 530 357 608907 609074 C 174 79.31 1177 reject_low 11 ALIGNMENT 0 YS2-10n24.p1k chr13 323 69 609261 609281 C 255 0.00 1177 reject_low 8 ALIGNMENT 45 YS2-10n24.p1k chr13 785 718 609003 609070 C 68 89.71 1177 reject_low 14,17 ALIGNMENT 0 YS2-10n24.p1k chr13 380 229 609360 609676 C 152 0.00 1177 reject_low 17 ALIGNMENT 35 YS2-10n24.p1k chr13 758 681 609183 609260 C 78 82.05 1177 reject_low 16 ALIGNMENT 0 YS2-10n24.p1k chr13 456 62 609860 609859 C 395 0.00 1177 reject_low 6 ALIGNMENT 0 YS2-10n24.p1k chr13 830 718 608946 608945 C 113 0.00 1177 accept 0 ALIGNMENT 0 YS2-10n24.p1k chr13 356 252 609075 609386 C 105 0.00 1177 reject_low 11 ALIGNMENT 0 YS2-10n24.p1k chr13 554 62 609861 609860 C 493 0.00 1177 reject_low 4 ALIGNMENT 0 YS2-10n24.p1k chr13 173 173 609465 609732 C 1 0.00 1177 reject_low 11 ALIGNMENT 0 YS2-10n24.p1k chr13 555 453 609260 609287 C 103 0.00 1177 reject_low 17 ALIGNMENT 21 YS2-10n24.p1k chr13 1069 1036 609351 609387 C 34 91.18 1177 reject_low 12,13,18,19 ALIGNMENT 0 YS2-10n24.p1k chr13 87 87 609059 609032 C 1 0.00 1177 reject_low 15 ALIGNMENT 26 YS2-10n24.p1k chr13 438 409 609824 609853 C 30 96.67 1177 reject_low 9,16,18 ALIGNMENT 60 YS2-10n24.p1k chr13 702 556 609113 609259 C 147 80.95 1177 reject_low 14,17 ALIGNMENT 24 YS2-10n24.p1k chr13 651 563 609818 609906 C 89 76.40 1177 reject_low 19 ALIGNMENT 59 YS2-10n24.p1k chr13 251 174 609387 609464 C 78 92.31 1177 reject_low 11 ALIGNMENT 0 YS2-10n24.p1k chr13 663 652 609803 609817 C 12 0.00 1177 reject_low 19 ALIGNMENT 0 YS2-10n24.p1k chr13 939 690 609705 609776 C 250 0.00 1177 reject_low 19 ALIGNMENT 0 YS2-10n24.p1k chr13 120 62 609440 609439 C 59 0.00 1177 reject_low 10 ALIGNMENT 0 YS2-10n24.p1k chr13 228 62 609836 609835 C 167 0.00 1177 reject_low 1 ALIGNMENT 0 YS2-10n24.p1k chr13 456 439 609362 609823 C 18 0.00 1177 reject_low 16 ALIGNMENT 42 YS2-10o01.q1k vc_4 193 234 5830 5871 F 42 100.00 234 reject_low 4 ALIGNMENT 42 YS2-10o01.q1k vc_3 234 193 2472 2513 C 42 100.00 234 reject_low 3 ALIGNMENT 36 YS2-10o01.q1k vc_5 231 196 1 36 C 36 100.00 234 reject_low 7 ALIGNMENT 39 YS2-10o01.q1k vc_5 234 196 5025 5063 C 39 100.00 234 reject_low 5 ALIGNMENT 0 YS2-10o01.q1k vc_3 192 62 2514 2513 C 131 0.00 234 reject_low 3 ALIGNMENT 158 YS2-10o01.p1k chr13 31 194 851190 851354 F 164 99.39 212 accept_chi 0 ALIGNMENT 0 YS2-10o01.q1k vc_5 195 62 37 36 C 134 0.00 234 reject_low 7 ALIGNMENT 0 YS2-10o01.q1k vc_7 62 196 13525 13524 F 135 0.00 234 reject_low 6 ALIGNMENT 0 YS2-10o01.p1k chr13 195 212 851354 851353 F 18 0.00 212 accept_chi 0 ALIGNMENT 0 YS2-10o01.q1k chr13 234 194 851191 851190 C 41 0.00 234 accept_chi 1 ALIGNMENT 0 YS2-10o01.q1k vc_4 62 192 5830 5829 F 131 0.00 234 reject_low 4 ALIGNMENT 158 YS2-10o01.q1k chr13 193 30 851190 851354 C 164 99.39 234 accept_chi 1 ALIGNMENT 0 YS2-10o01.q1k vc_5 195 62 5064 5063 C 134 0.00 234 reject_low 5 ALIGNMENT 0 YS2-10o01.q1k vc_1 192 62 2514 2513 C 131 0.00 234 reject_low 2 ALIGNMENT 38 YS2-10o01.q1k vc_7 197 234 13525 13562 F 38 100.00 234 reject_low 6 ALIGNMENT 42 YS2-10o01.q1k vc_1 234 193 2472 2513 C 42 100.00 234 reject_low 2 ALIGNMENT 1002 YS2-10o02.q1k chr11 1219 40 273684 274862 C 1180 95.93 1226 accept 0 ALIGNMENT 924 YS2-10o02.p1k chr11 26 1113 269607 270687 F 1088 96.32 1213 accept 0 ALIGNMENT 1024 YS2-10o03.p1k chr02 1185 28 588874 590041 C 1158 96.98 1226 accept 0 ALIGNMENT 1029 YS2-10o03.q1k chr02 50 1255 584566 585778 F 1206 96.10 1255 accept 0 ALIGNMENT 914 YS2-10o04.q1k chr15 45 1172 928543 929673 F 1128 94.77 1181 accept_chi 1 ALIGNMENT 1032 YS2-10o04.p1k chr01 31 1225 97918 99127 F 1195 96.65 1229 accept_chi 0 ALIGNMENT 71 YS2-10o05.q1k chr11 982 824 144790 144948 C 159 81.76 1245 reject_low 11 ALIGNMENT 0 YS2-10o05.q1k chr11 677 62 144933 144932 C 616 0.00 1245 reject_low 4 ALIGNMENT 62 YS2-10o05.p1k chr09 202 112 197587 197678 C 91 90.11 1281 reject_low 20 ALIGNMENT 0 YS2-10o05.q1k chr11 901 773 144677 144676 C 129 0.00 1245 reject_low 7 ALIGNMENT 0 YS2-10o05.p1k chr16 62 123 210186 210185 F 62 0.00 1281 reject_low 22 ALIGNMENT 0 YS2-10o05.q1k chr11 607 62 144787 144786 C 546 0.00 1245 reject_low 18 ALIGNMENT 76 YS2-10o05.p1k chr07 200 125 328586 328661 C 76 100.00 1281 reject_low 25 ALIGNMENT 0 YS2-10o05.q1k chr11 785 62 144933 144932 C 724 0.00 1245 reject_low 6 ALIGNMENT 63 YS2-10o05.q1k chr10 985 837 121041 121195 C 149 81.21 1245 reject_low 14 ALIGNMENT 949 YS2-10o05.p1k chr11 36 1181 140929 142076 F 1146 95.64 1281 accept 0 ALIGNMENT 26 YS2-10o05.q1k chr11 945 994 142538 142587 F 50 84.00 1245 reject_low 3 ALIGNMENT 0 YS2-10o05.p1k chr13 123 62 290877 290876 C 62 0.00 1281 reject_low 21 ALIGNMENT 0 YS2-10o05.p1k chr12 911 201 797179 797178 C 711 0.00 1281 reject_low 15 ALIGNMENT 0 YS2-10o05.p1k chr07 123 62 541931 541930 C 62 0.00 1281 reject_low 24 ALIGNMENT 77 YS2-10o05.p1k chr13 203 124 290797 290876 C 80 98.75 1281 reject_low 21 ALIGNMENT 0 YS2-10o05.q1k chr10 596 62 121106 121105 C 535 0.00 1245 reject_low 32 ALIGNMENT 0 YS2-10o05.p1k chr09 911 203 197588 197587 C 709 0.00 1281 reject_low 20 ALIGNMENT 0 YS2-10o05.q1k chr11 836 62 144990 144989 C 775 0.00 1245 reject_low 8 ALIGNMENT 0 YS2-10o05.p1k chr07 201 911 401601 401600 F 711 0.00 1281 reject_low 28 ALIGNMENT 26 YS2-10o05.q1k chr11 945 994 142238 142287 F 50 84.00 1245 reject_low 31 ALIGNMENT 0 YS2-10o05.q1k chr11 62 944 142238 142237 F 883 0.00 1245 reject_low 31 ALIGNMENT 75 YS2-10o05.p1k chr07 201 124 541853 541930 C 78 98.72 1281 reject_low 24 ALIGNMENT 0 YS2-10o05.q1k chr10 901 838 120842 120841 C 64 0.00 1245 reject_low 32,33 ALIGNMENT 0 YS2-10o05.q1k chr10 728 62 121196 121195 C 667 0.00 1245 reject_low 10 ALIGNMENT 303 YS2-10o05.q1k chr11 1184 662 144468 145002 C 523 86.81 1245 reject_low 1 ALIGNMENT 0 YS2-10o05.p1k chr05 127 62 177171 177170 C 66 0.00 1281 reject_low 27 ALIGNMENT 0 YS2-10o05.p1k chr07 62 127 401529 401528 F 66 0.00 1281 reject_low 28 ALIGNMENT 80 YS2-10o05.p1k chr03 125 207 82457 82539 F 83 98.80 1281 reject_low 16 ALIGNMENT 0 YS2-10o05.q1k chr10 223 62 121557 121556 C 162 0.00 1245 reject_low 2 ALIGNMENT 77 YS2-10o05.p1k chr16 124 200 210186 210262 F 77 100.00 1281 reject_low 22 ALIGNMENT 36 YS2-10o05.q1k chr10 837 778 120841 120900 C 60 86.67 1245 reject_low 32,33 ALIGNMENT 0 YS2-10o05.p1k chr10 208 911 116012 116011 F 704 0.00 1281 reject_low 2 ALIGNMENT 76 YS2-10o05.p1k chr09 203 128 370411 370486 C 76 100.00 1281 reject_low 23 ALIGNMENT 0 YS2-10o05.q1k chr11 823 62 144949 144948 C 762 0.00 1245 reject_low 11 ALIGNMENT 171 YS2-10o05.q1k chr11 934 678 144676 144932 C 257 89.11 1245 reject_low 4 ALIGNMENT 80 YS2-10o05.p1k chr05 112 203 487310 487400 F 92 96.74 1281 reject_low 13 ALIGNMENT 73 YS2-10o05.p1k chr12 200 112 797178 797266 C 89 94.38 1281 reject_low 15 ALIGNMENT 124 YS2-10o05.q1k chr11 820 624 144682 144878 C 197 87.82 1245 reject_low 5 ALIGNMENT 0 YS2-10o05.p1k chr12 111 62 797267 797266 C 50 0.00 1281 reject_low 15 ALIGNMENT 0 YS2-10o05.q1k chr11 836 944 142462 142537 F 109 0.00 1245 reject_low 3 ALIGNMENT 77 YS2-10o05.q1k chr10 989 729 120923 121195 C 261 77.39 1245 reject_low 10 ALIGNMENT 0 YS2-10o05.q1k chr11 578 62 144870 144869 C 517 0.00 1245 reject_low 7 ALIGNMENT 118 YS2-10o05.q1k chr11 982 786 144736 144932 C 197 86.80 1245 reject_low 6 ALIGNMENT 0 YS2-10o05.q1k chr10 890 62 121196 121195 C 829 0.00 1245 reject_low 29 ALIGNMENT 0 YS2-10o05.p1k chr10 62 127 115933 115932 F 66 0.00 1281 reject_low 2 ALIGNMENT 0 YS2-10o05.p1k chr03 208 911 82539 82538 F 704 0.00 1281 reject_low 16 ALIGNMENT 0 YS2-10o05.p1k chr07 124 62 328662 328661 C 63 0.00 1281 reject_low 25 ALIGNMENT 0 YS2-10o05.q1k chr11 661 62 145003 145002 C 600 0.00 1245 reject_low 1 ALIGNMENT 0 YS2-10o05.p1k chr03 62 124 82457 82456 F 63 0.00 1281 reject_low 16 ALIGNMENT 27 YS2-10o05.q1k chr11 567 835 142181 142461 F 269 70.63 1245 reject_low 3 ALIGNMENT 147 YS2-10o05.q1k chr11 186 409 141812 142035 F 224 88.84 1245 reject_low 3 ALIGNMENT 0 YS2-10o05.q1k chr10 782 62 121196 121195 C 721 0.00 1245 reject_low 12 ALIGNMENT 0 YS2-10o05.p1k chr16 201 911 210262 210261 F 711 0.00 1281 reject_low 22 ALIGNMENT 70 YS2-10o05.q1k chr10 988 783 120981 121195 C 206 78.64 1245 reject_low 12 ALIGNMENT 89 YS2-10o05.q1k chr11 982 837 144844 144989 C 146 86.99 1245 reject_low 8 ALIGNMENT 0 YS2-10o05.q1k chr11 623 62 144879 144878 C 562 0.00 1245 reject_low 5 ALIGNMENT 0 YS2-10o05.p1k chr07 911 201 328587 328586 C 711 0.00 1281 reject_low 25 ALIGNMENT 0 YS2-10o05.p1k chr07 911 202 541854 541853 C 710 0.00 1281 reject_low 24 ALIGNMENT 0 YS2-10o05.q1k chr11 901 875 144683 144682 C 27 0.00 1245 accept 0 ALIGNMENT 0 YS2-10o05.p1k chr04 62 112 1017186 1017185 F 51 0.00 1281 reject_low 19 ALIGNMENT 39 YS2-10o05.q1k chr10 772 597 120924 121105 C 176 75.00 1245 reject_low 32 ALIGNMENT 0 YS2-10o05.p1k chr05 62 111 487310 487309 F 50 0.00 1281 reject_low 13 ALIGNMENT 0 YS2-10o05.p1k chr05 911 202 177098 177097 C 710 0.00 1281 reject_low 27 ALIGNMENT 47 YS2-10o05.q1k chr11 712 608 144682 144786 C 105 81.90 1245 reject_low 18 ALIGNMENT 0 YS2-10o05.p1k chr09 911 204 370412 370411 C 708 0.00 1281 reject_low 23 ALIGNMENT 75 YS2-10o05.p1k chr02 201 127 645161 645235 C 75 100.00 1281 reject_low 26 ALIGNMENT 40 YS2-10o05.q1k chr10 988 891 121095 121195 C 98 80.61 1245 reject_low 29 ALIGNMENT 29 YS2-10o05.q1k chr10 994 945 121146 121195 C 50 86.00 1245 reject_low 30 ALIGNMENT 0 YS2-10o05.p1k chr05 911 207 354925 354924 C 705 0.00 1281 reject_low 17 ALIGNMENT 0 YS2-10o05.p1k chr02 126 62 645236 645235 C 65 0.00 1281 reject_low 26 ALIGNMENT 0 YS2-10o05.p1k chr09 127 62 370487 370486 C 66 0.00 1281 reject_low 23 ALIGNMENT 0 YS2-10o05.q1k chr10 944 62 121196 121195 C 883 0.00 1245 reject_low 30 ALIGNMENT 91 YS2-10o05.q1k chr11 772 579 144676 144869 C 194 82.47 1245 reject_low 7 ALIGNMENT 767 YS2-10o05.q1k chr11 874 34 144682 145522 C 841 97.27 1245 accept 0 ALIGNMENT 83 YS2-10o05.q1k chr10 934 675 120924 121195 C 260 78.08 1245 reject_low 9 ALIGNMENT 64 YS2-10o05.p1k chr04 113 202 1017186 1017274 F 90 91.11 1281 reject_low 19 ALIGNMENT 0 YS2-10o05.p1k chr05 204 911 487400 487399 F 708 0.00 1281 reject_low 13 ALIGNMENT 73 YS2-10o05.p1k chr07 128 200 401529 401601 F 73 100.00 1281 reject_low 28 ALIGNMENT 0 YS2-10o05.p1k chr09 111 62 197679 197678 C 50 0.00 1281 reject_low 20 ALIGNMENT 0 YS2-10o05.p1k chr04 203 911 1017274 1017273 F 709 0.00 1281 reject_low 19 ALIGNMENT 79 YS2-10o05.p1k chr05 206 128 354924 355002 C 79 100.00 1281 reject_low 17 ALIGNMENT 0 YS2-10o05.q1k chr10 777 773 120901 120923 C 5 0.00 1245 reject_low 32 ALIGNMENT 0 YS2-10o05.p1k chr02 911 202 645162 645161 C 710 0.00 1281 reject_low 26 ALIGNMENT 0 YS2-10o05.q1k chr11 901 713 144683 144682 C 189 0.00 1245 reject_low 18 ALIGNMENT 74 YS2-10o05.p1k chr05 201 128 177097 177170 C 74 100.00 1281 reject_low 27 ALIGNMENT 0 YS2-10o05.q1k chr10 674 62 121196 121195 C 613 0.00 1245 reject_low 9 ALIGNMENT 0 YS2-10o05.q1k chr10 777 713 120901 120929 C 65 0.00 1245 reject_low 33 ALIGNMENT 0 YS2-10o05.q1k chr10 613 62 121032 121031 C 552 0.00 1245 reject_low 33 ALIGNMENT 0 YS2-10o05.q1k chr11 62 185 141812 141811 F 124 0.00 1245 reject_low 3 ALIGNMENT 0 YS2-10o05.q1k chr10 836 62 121196 121195 C 775 0.00 1245 reject_low 14 ALIGNMENT 0 YS2-10o05.q1k chr11 410 566 142036 142180 F 157 0.00 1245 reject_low 3 ALIGNMENT 77 YS2-10o05.p1k chr10 128 207 115933 116012 F 80 98.75 1281 reject_low 2 ALIGNMENT 0 YS2-10o05.p1k chr05 127 62 355003 355002 C 66 0.00 1281 reject_low 17 ALIGNMENT 148 YS2-10o05.q1k chr10 820 224 120930 121556 C 597 75.88 1245 reject_low 2 ALIGNMENT 0 YS2-10o05.p1k chr13 911 204 290798 290797 C 708 0.00 1281 reject_low 21 ALIGNMENT 39 YS2-10o05.q1k chr10 712 614 120930 121031 C 99 80.81 1245 reject_low 33 ALIGNMENT 0 YS2-10o05.q1k chr11 901 821 144683 144682 C 81 0.00 1245 reject_low 5 ALIGNMENT 0 YS2-10o05.q1k chr10 901 821 120931 120930 C 81 0.00 1245 reject_low 2 ALIGNMENT 1017 YS2-10o06.p1k chr02 29 1257 110260 111488 F 1229 95.52 1279 accept 0 ALIGNMENT 900 YS2-10o06.q1k chr02 1051 32 110603 111637 C 1020 97.06 1208 accept 0 ALIGNMENT 1016 YS2-10o07.p1k chr02 1152 28 377529 378667 C 1125 97.16 1251 accept 0 ALIGNMENT 1055 YS2-10o07.q1k chr02 45 1232 374249 375444 F 1188 96.38 1311 accept 0 ALIGNMENT 56 YS2-10o08.p1k chr02 496 435 29579 29640 C 62 100.00 515|0,3 accept_trans 0 ALIGNMENT 154 YS2-10o08.p1k chr02 207 28 36219 36398 C 180 96.67 515|2,0 accept_trans 0 ALIGNMENT 280 YS2-10o08.q1k vc_2 1 303 2322 2624 F 303 97.36 586 reject_vc 5 ALIGNMENT 0 YS2-10o08.q1k vc_4 237 62 113 112 C 176 0.00 586 reject_low 9 ALIGNMENT 136 YS2-10o08.q1k vc_4 308 569 1879 2151 F 262 84.73 586 reject_vc 8 ALIGNMENT 226 YS2-10o08.q1k vc_7 303 53 4922 5172 C 251 96.41 586|0,1 reject_vc 7 ALIGNMENT 51 YS2-10o08.q1k vc_7 54 3 6360 6411 C 52 100.00 586|1,0 reject_vc 7 ALIGNMENT 365 YS2-10o08.q1k vc_4 413 1 5240 5654 C 413 95.64 586 reject_vc 3 ALIGNMENT 0 YS2-10o08.q1k vc_7 53 54 5172 6360 C 0 0.00 586 reject_vc 7 ALIGNMENT 51 YS2-10o08.q1k vc_4 238 304 1548 1614 F 67 91.04 586 reject_vc 8 ALIGNMENT 0 YS2-10o08.q1k vc_4 237 62 6340 6339 C 176 0.00 586 reject_low 10 ALIGNMENT 0 YS2-10o08.p1k chr02 437 438 29638 35601 C 0 0.00 515 accept_trans 0 ALIGNMENT 424 YS2-10o08.q1k vc_5 1 569 2556 3135 F 569 91.56 586 reject_vc 1 ALIGNMENT 0 YS2-10o08.p1k chr02 515 497 29580 29579 C 19 0.00 515 accept_trans 0 ALIGNMENT 0 YS2-10o08.q1k vc_7 304 304 4700 4921 C 1 0.00 586 reject_vc 7 ALIGNMENT 51 YS2-10o08.q1k vc_4 304 238 6273 6339 C 67 91.04 586 reject_low 10 ALIGNMENT 280 YS2-10o08.q1k vc_1 1 303 2689 2991 F 303 97.36 586 reject_vc 4 ALIGNMENT 0 YS2-10o08.q1k vc_4 62 237 1548 1547 F 176 0.00 586 reject_vc 8 ALIGNMENT 155 YS2-10o08.p1k chr02 439 203 35600 35847 C 237 89.87 515|2,3 accept_trans 0 ALIGNMENT 280 YS2-10o08.q1k vc_3 1 303 2689 2991 F 303 97.36 586 reject_vc 6 ALIGNMENT 51 YS2-10o08.q1k vc_4 304 238 46 112 C 67 91.04 586 reject_low 9 ALIGNMENT 90 YS2-10o08.q1k vc_7 413 305 4591 4699 C 109 92.66 586 reject_vc 7 ALIGNMENT 0 YS2-10o08.q1k vc_4 305 307 1615 1878 F 3 0.00 586 reject_vc 8 ALIGNMENT 424 YS2-10o08.q1k vc_7 569 1 1990 2569 C 569 91.56 586 reject_vc 2 ALIGNMENT 0 YS2-10o08.p1k chr02 205 206 35845 36220 C 0 0.00 515 accept_trans 0 ALIGNMENT 172 YS2-10o09.q1k chr15 861 51 159549 160359 C 811 75.09 1278 reject_low 1 ALIGNMENT 989 YS2-10o09.p1k chr02 1270 30 537538 538770 C 1241 94.76 1289 accept 0 ALIGNMENT 63 YS2-10o09.q1k chr13 57 423 435108 435474 F 367 73.84 1278 reject_low 2 ALIGNMENT 0 YS2-10o09.q1k chr13 424 797 435474 435473 F 374 0.00 1278 reject_low 2 ALIGNMENT 959 YS2-10o09.q1k chr02 49 1239 533997 535178 F 1191 94.63 1278 accept 0 ALIGNMENT 905 YS2-10o10.q1k chr11 49 1135 305820 306919 F 1087 94.85 1238 accept 0 ALIGNMENT 789 YS2-10o10.p1k chr11 928 39 310811 311701 C 890 96.52 1261 accept 0 ALIGNMENT 0 YS2-10o11.p1k chr16 668 62 818558 818557 C 607 0.00 1309 reject_low 1 ALIGNMENT 24 YS2-10o11.p1k chr16 651 701 187315 187365 F 51 88.24 1309 reject_low 2 ALIGNMENT 0 YS2-10o11.p1k chr16 857 668 818527 818526 C 190 0.00 1309 accept 0 ALIGNMENT 0 YS2-10o11.p1k chr16 702 857 187365 187364 F 156 0.00 1309 reject_low 2 ALIGNMENT 0 YS2-10o11.p1k chr16 62 650 187315 187314 F 589 0.00 1309 reject_low 2 ALIGNMENT 583 YS2-10o11.p1k chr16 667 33 818526 819160 C 635 99.37 1309 accept 0 ALIGNMENT 400 YS2-10o11.p1k chr16 1278 669 817938 818557 C 610 90.16 1309 reject_low 1 ALIGNMENT 935 YS2-10o11.q1k chr16 28 1127 817343 818452 F 1100 96.27 1288 accept 0 ALIGNMENT 202 YS2-10o12.p1k vc_7 1 399 13918 14301 F 399 86.47 494 reject_vc 7 ALIGNMENT 0 YS2-10o12.q1k vc_7 62 475 13525 13524 F 414 0.00 513 reject_low 12 ALIGNMENT 0 YS2-10o12.q1k vc_3 472 62 2513 2512 C 411 0.00 513 reject_low 9 ALIGNMENT 41 YS2-10o12.q1k vc_1 513 473 2472 2512 C 41 100.00 513 reject_low 8 ALIGNMENT 0 YS2-10o12.q1k vc_4 62 472 5831 5830 F 411 0.00 513 reject_low 10 ALIGNMENT 39 YS2-10o12.q1k vc_5 513 475 5025 5063 C 39 100.00 513 reject_low 11 ALIGNMENT 208 YS2-10o12.p1k vc_5 399 1 4286 4669 C 399 86.97 494 reject_vc 4 ALIGNMENT 430 YS2-10o12.q1k chr07 31 472 825994 826436 F 442 99.77 513 accept 0 ALIGNMENT 0 YS2-10o12.q1k vc_5 474 62 37 36 C 413 0.00 513 reject_low 13 ALIGNMENT 41 YS2-10o12.q1k vc_4 473 513 5831 5871 F 41 100.00 513 reject_low 10 ALIGNMENT 38 YS2-10o12.q1k vc_7 476 513 13525 13562 F 38 100.00 513 reject_low 12 ALIGNMENT 208 YS2-10o12.p1k vc_2 399 1 1366 1749 C 399 86.97 494 reject_vc 2 ALIGNMENT 208 YS2-10o12.p1k vc_3 399 1 1366 1749 C 399 86.97 494 reject_vc 3 ALIGNMENT 41 YS2-10o12.q1k vc_3 513 473 2472 2512 C 41 100.00 513 reject_low 9 ALIGNMENT 0 YS2-10o12.q1k chr07 473 513 826436 826435 F 41 0.00 513 accept 0 ALIGNMENT 202 YS2-10o12.p1k vc_7 1 399 456 839 F 399 86.47 494 reject_vc 6 ALIGNMENT 36 YS2-10o12.q1k vc_5 510 475 1 36 C 36 100.00 513 reject_low 13 ALIGNMENT 0 YS2-10o12.q1k vc_1 472 62 2513 2512 C 411 0.00 513 reject_low 8 ALIGNMENT 208 YS2-10o12.p1k vc_6 1 399 3712 4095 F 399 86.97 494 reject_vc 5 ALIGNMENT 208 YS2-10o12.p1k vc_1 399 1 1366 1749 C 399 86.97 494 reject_vc 1 ALIGNMENT 0 YS2-10o12.q1k vc_5 474 62 5064 5063 C 413 0.00 513 reject_low 11 ALIGNMENT 0 YS2-10o13.p1k chr12 858 546 64752 64751 C 313 0.00 1247 reject_low 6 ALIGNMENT 1001 YS2-10o13.p1k chr12 29 1185 498654 499834 F 1157 96.80 1247 accept 0 ALIGNMENT 95 YS2-10o13.p1k chr12 508 318 65016 65206 C 191 83.77 1247 reject_low 7 ALIGNMENT 0 YS2-10o13.p1k chr12 858 546 64068 64067 C 313 0.00 1247 reject_low 4 ALIGNMENT 135 YS2-10o13.p1k chr12 545 318 64295 64522 C 228 86.84 1247 reject_low 3 ALIGNMENT 0 YS2-10o13.p1k chr12 317 62 64523 64522 C 256 0.00 1247 reject_low 3 ALIGNMENT 114 YS2-10o13.p1k chr12 545 318 64751 64978 C 228 83.77 1247 reject_low 6 ALIGNMENT 935 YS2-10o13.q1k chr12 1144 38 499554 500665 C 1107 95.93 1278 accept 0 ALIGNMENT 160 YS2-10o13.p1k chr09 326 545 69150 69369 F 220 91.36 1247 reject_low 2 ALIGNMENT 123 YS2-10o13.p1k chr12 545 318 64523 64750 C 228 85.09 1247 reject_low 5 ALIGNMENT 0 YS2-10o13.p1k chr12 858 546 64524 64523 C 313 0.00 1247 reject_low 5 ALIGNMENT 0 YS2-10o13.p1k chr11 858 546 617798 617797 C 313 0.00 1247 reject_low 1 ALIGNMENT 0 YS2-10o13.p1k chr09 546 858 69369 69368 F 313 0.00 1247 reject_low 2 ALIGNMENT 0 YS2-10o13.p1k chr12 858 546 64296 64295 C 313 0.00 1247 reject_low 3 ALIGNMENT 0 YS2-10o13.p1k chr12 858 509 65017 65016 C 350 0.00 1247 reject_low 7 ALIGNMENT 0 YS2-10o13.p1k chr09 62 325 69150 69149 F 264 0.00 1247 reject_low 2 ALIGNMENT 0 YS2-10o13.p1k chr12 317 62 65207 65206 C 256 0.00 1247 reject_low 7 ALIGNMENT 129 YS2-10o13.p1k chr12 545 318 64067 64294 C 228 85.96 1247 reject_low 4 ALIGNMENT 0 YS2-10o13.p1k chr12 317 62 64295 64294 C 256 0.00 1247 reject_low 4 ALIGNMENT 0 YS2-10o13.p1k chr12 317 62 64979 64978 C 256 0.00 1247 reject_low 6 ALIGNMENT 166 YS2-10o13.p1k chr11 545 327 617797 618015 C 219 92.24 1247 reject_low 1 ALIGNMENT 0 YS2-10o13.p1k chr12 317 62 64751 64750 C 256 0.00 1247 reject_low 5 ALIGNMENT 0 YS2-10o13.p1k chr11 326 62 618016 618015 C 265 0.00 1247 reject_low 1 ALIGNMENT 1030 YS2-10o15.p1k chr14 29 1318 337396 338692 F 1290 93.95 1345 accept 0 ALIGNMENT 808 YS2-10o15.q1k chr14 1130 52 340849 341916 C 1079 92.68 1215 accept 0 ALIGNMENT 0 YS2-10o16.q1k chr06 176 62 31730 31729 C 115 0.00 1328 reject_low 4 ALIGNMENT 119 YS2-10o16.q1k chr12 544 662 485696 485814 F 119 100.00 1328 reject_low 7 ALIGNMENT 0 YS2-10o16.q1k chr12 663 834 485814 485813 F 172 0.00 1328 reject_low 7 ALIGNMENT 0 YS2-10o16.q1k chr12 663 834 472582 472581 F 172 0.00 1328 reject_low 5 ALIGNMENT 0 YS2-10o16.q1k chr12 663 834 468930 468929 F 172 0.00 1328 reject_low 2 ALIGNMENT 989 YS2-10o16.p1k chr12 1158 31 453448 454590 C 1128 96.81 1287 reject_low 1 ALIGNMENT 0 YS2-10o16.q1k chr12 62 543 472464 472463 F 482 0.00 1328 reject_low 5 ALIGNMENT 0 YS2-10o16.q1k chr12 678 834 489481 489480 F 157 0.00 1328 reject_low 3 ALIGNMENT 885 YS2-10o16.q1k chr12 38 1056 459169 460201 F 1019 96.96 1328 accept 0 ALIGNMENT 0 YS2-10o16.q1k chr12 62 543 485696 485695 F 482 0.00 1328 reject_low 7 ALIGNMENT 595 YS2-10o16.q1k chr12 38 662 468306 468930 F 625 99.52 1328 reject_low 2 ALIGNMENT 94 YS2-10o16.q1k chr06 284 177 31622 31729 C 108 98.15 1328 reject_low 4 ALIGNMENT 0 YS2-10o16.q1k chr12 62 543 489348 489347 F 482 0.00 1328 reject_low 3 ALIGNMENT 119 YS2-10o16.q1k chr12 544 662 482044 482162 F 119 100.00 1328 reject_low 6 ALIGNMENT 0 YS2-10o16.q1k chr12 62 543 482044 482043 F 482 0.00 1328 reject_low 6 ALIGNMENT 0 YS2-10o16.q1k chr12 663 834 482162 482161 F 172 0.00 1328 reject_low 6 ALIGNMENT 0 YS2-10o16.q1k chr06 834 285 31623 31622 C 550 0.00 1328 reject_low 4 ALIGNMENT 128 YS2-10o16.q1k chr12 544 677 489348 489481 F 134 98.51 1328 reject_low 3 ALIGNMENT 989 YS2-10o16.p1k chr12 1158 31 462585 463727 C 1128 96.81 1287 accept 0 ALIGNMENT 119 YS2-10o16.q1k chr12 544 662 472464 472582 F 119 100.00 1328 reject_low 5 ALIGNMENT 0 YS2-10o17.q1k vc_1 467 62 2513 2512 C 406 0.00 508 reject_low 8 ALIGNMENT 253 YS2-10o17.p1k vc_7 1 447 13918 14366 F 447 86.80 487 reject_vc 6 ALIGNMENT 0 YS2-10o17.q1k vc_7 62 470 13525 13524 F 409 0.00 508 reject_low 13 ALIGNMENT 259 YS2-10o17.p1k vc_1 447 1 1301 1749 C 447 87.25 487 reject_vc 1 ALIGNMENT 41 YS2-10o17.q1k vc_3 508 468 2472 2512 C 41 100.00 508 reject_low 10 ALIGNMENT 259 YS2-10o17.p1k vc_3 447 1 1301 1749 C 447 87.25 487 reject_vc 3 ALIGNMENT 41 YS2-10o17.q1k vc_1 508 468 2472 2512 C 41 100.00 508 reject_low 8 ALIGNMENT 0 YS2-10o17.q1k chr02 508 468 640222 640221 C 41 0.00 508 accept 0 ALIGNMENT 0 YS2-10o17.q1k vc_5 469 62 5064 5063 C 408 0.00 508 reject_low 12 ALIGNMENT 259 YS2-10o17.p1k vc_2 447 1 1301 1749 C 447 87.25 487 reject_vc 2 ALIGNMENT 0 YS2-10o17.q1k vc_2 467 62 2146 2145 C 406 0.00 508 reject_low 9 ALIGNMENT 412 YS2-10o17.q1k chr02 467 40 640221 640648 C 428 100.00 508 accept 0 ALIGNMENT 39 YS2-10o17.q1k vc_5 508 470 5025 5063 C 39 100.00 508 reject_low 12 ALIGNMENT 256 YS2-10o17.p1k vc_6 1 426 3712 4138 F 426 88.03 487 reject_vc 7 ALIGNMENT 41 YS2-10o17.q1k vc_4 468 508 5831 5871 F 41 100.00 508 reject_low 11 ALIGNMENT 0 YS2-10o17.q1k vc_4 62 467 5831 5830 F 406 0.00 508 reject_low 11 ALIGNMENT 259 YS2-10o17.p1k vc_5 447 1 4221 4669 C 447 87.25 487 reject_vc 4 ALIGNMENT 38 YS2-10o17.q1k vc_7 471 508 13525 13562 F 38 100.00 508 reject_low 13 ALIGNMENT 0 YS2-10o17.q1k vc_5 469 62 37 36 C 408 0.00 508 reject_low 14 ALIGNMENT 0 YS2-10o17.q1k vc_3 467 62 2513 2512 C 406 0.00 508 reject_low 10 ALIGNMENT 253 YS2-10o17.p1k vc_7 1 447 456 904 F 447 86.80 487 reject_vc 5 ALIGNMENT 41 YS2-10o17.q1k vc_2 508 468 2105 2145 C 41 100.00 508 reject_low 9 ALIGNMENT 36 YS2-10o17.q1k vc_5 505 470 1 36 C 36 100.00 508 reject_low 14 ALIGNMENT 408 YS2-10o18.q1k chr10 45 799 298533 299292 F 755 86.23 1100 accept 0 ALIGNMENT 951 YS2-10o20.p1k chr10 1139 30 301618 302741 C 1110 96.22 1298 accept 0 ALIGNMENT 902 YS2-10o20.q1k chr10 37 1049 298401 299420 F 1013 97.73 1232 accept 0 ALIGNMENT 1083 YS2-10o21.p1k chr07 27 1255 228851 230084 F 1229 96.99 1281 accept 0 ALIGNMENT 920 YS2-10o21.q1k chr07 1129 42 231180 232278 C 1088 96.32 1309 accept 0 ALIGNMENT 301 YS2-10o22.q1k chr12 617 195 273949 274365 C 423 90.54 1008 accept 0 ALIGNMENT 962 YS2-10o22.p1k chr12 29 1112 270179 271277 F 1084 97.42 1242 accept 0 ALIGNMENT 119 YS2-10o24.p1k chr12 463 581 472464 472582 F 119 100.00 1251 reject_low 5 ALIGNMENT 527 YS2-10o24.p1k chr12 29 581 468377 468930 F 553 99.46 1251 reject_low 2 ALIGNMENT 0 YS2-10o24.p1k chr06 828 204 31623 31622 C 625 0.00 1251 reject_low 4 ALIGNMENT 937 YS2-10o24.q1k chr12 1050 33 463361 464379 C 1018 97.84 1161 accept 0 ALIGNMENT 0 YS2-10o24.p1k chr06 95 62 31730 31729 C 34 0.00 1251 reject_low 4 ALIGNMENT 0 YS2-10o24.p1k chr12 62 462 489348 489347 F 401 0.00 1251 reject_low 3 ALIGNMENT 94 YS2-10o24.p1k chr06 203 96 31622 31729 C 108 98.15 1251 reject_low 4 ALIGNMENT 0 YS2-10o24.p1k chr12 62 462 482044 482043 F 401 0.00 1251 reject_low 6 ALIGNMENT 0 YS2-10o24.p1k chr12 582 828 482162 482161 F 247 0.00 1251 reject_low 6 ALIGNMENT 0 YS2-10o24.p1k chr12 582 828 472582 472581 F 247 0.00 1251 reject_low 5 ALIGNMENT 843 YS2-10o24.p1k chr12 29 1183 459240 460399 F 1155 93.85 1251 accept 0 ALIGNMENT 0 YS2-10o24.p1k chr12 62 462 472464 472463 F 401 0.00 1251 reject_low 5 ALIGNMENT 0 YS2-10o24.p1k chr12 582 828 485814 485813 F 247 0.00 1251 reject_low 7 ALIGNMENT 128 YS2-10o24.p1k chr12 463 596 489348 489481 F 134 98.51 1251 reject_low 3 ALIGNMENT 0 YS2-10o24.p1k chr12 582 828 468930 468929 F 247 0.00 1251 reject_low 2 ALIGNMENT 119 YS2-10o24.p1k chr12 463 581 482044 482162 F 119 100.00 1251 reject_low 6 ALIGNMENT 119 YS2-10o24.p1k chr12 463 581 485696 485814 F 119 100.00 1251 reject_low 7 ALIGNMENT 937 YS2-10o24.q1k chr12 1050 33 454224 455242 C 1018 97.84 1161 reject_low 1 ALIGNMENT 0 YS2-10o24.p1k chr12 62 462 485696 485695 F 401 0.00 1251 reject_low 7 ALIGNMENT 0 YS2-10o24.p1k chr12 597 828 489481 489480 F 232 0.00 1251 reject_low 3 ALIGNMENT 641 YS2-10p01.p1k chr14 32 1026 775835 776816 F 995 90.05 1226 reject_low 1 ALIGNMENT 496 YS2-10p01.q1k chr05 533 1224 15001 15685 F 692 92.77 1232|4,0 accept 0 ALIGNMENT 879 YS2-10p01.p1k chr05 1137 32 18972 20054 C 1106 95.12 1226 accept 0 ALIGNMENT 0 YS2-10p01.q1k chr05 537 536 14682 15004 F 0 0.00 1232 accept 0 ALIGNMENT 450 YS2-10p01.q1k chr05 35 539 14180 14684 F 505 98.02 1232|0,3 accept 0 ALIGNMENT 901 YS2-10p03.q1k chr04 1182 38 794822 795977 C 1145 93.97 1199 accept 0 ALIGNMENT 1033 YS2-10p03.p1k chr04 38 1251 791660 792873 F 1214 96.54 1258 accept 0 ALIGNMENT 992 YS2-10p04.p1k chr08 30 1223 396021 397231 F 1194 95.23 1232 accept 0 ALIGNMENT 801 YS2-10p04.q1k chr08 924 37 399267 400149 C 888 97.75 1257 accept 0 ALIGNMENT 1022 YS2-10p05.p1k chr03 1218 37 66568 67768 C 1182 96.45 1262 accept 0 ALIGNMENT 0 YS2-10p06.p1k chr14 406 388 708051 708050 C 19 0.00 406 accept 0 ALIGNMENT 344 YS2-10p06.p1k chr14 387 36 708050 708402 C 352 99.72 406 accept 0 ALIGNMENT 1032 YS2-10p07.p1k chr16 1171 30 705804 706951 C 1142 97.81 1263 accept 0 ALIGNMENT 887 YS2-10p07.q1k chr16 37 1034 702109 703105 F 998 97.39 1207 accept 0 ALIGNMENT 668 YS2-10p08.p1k chr07 34 1069 450961 451991 F 1036 89.38 1255 accept 0 ALIGNMENT 594 YS2-10p08.q1k chr07 937 41 455363 456252 C 897 89.86 1232 accept 0 ALIGNMENT 1028 YS2-10p09.p1k chr07 30 1290 787935 789182 F 1261 95.32 1305 accept 0 ALIGNMENT 801 YS2-10p09.q1k chr07 1008 39 790961 791922 C 970 95.77 1183 accept 0 ALIGNMENT 0 YS2-10p10.q1k vc_4 952 62 5813 5812 C 891 0.00 1274 reject_low 18 ALIGNMENT 0 YS2-10p10.q1k vc_3 912 62 2513 2512 C 851 0.00 1274 reject_low 26 ALIGNMENT 36 YS2-10p10.q1k vc_5 953 915 5025 5063 C 39 97.44 1274 reject_low 27 ALIGNMENT 843 YS2-10p10.p1k chr02 908 39 188706 189575 C 870 99.66 1257 accept_chi 0 ALIGNMENT 0 YS2-10p10.q1k chr09 880 747 13591 13590 C 134 0.00 1274 reject_low 12 ALIGNMENT 148 YS2-10p10.q1k vc_7 1260 953 2408 2727 C 308 84.74 1274 reject_low 3 ALIGNMENT 0 YS2-10p10.q1k vc_4 62 912 5831 5830 F 851 0.00 1274 reject_low 20 ALIGNMENT 23 YS2-10p10.p1k vc_1 955 925 2441 2472 C 31 93.55 1257 reject_low 22 ALIGNMENT 148 YS2-10p10.q1k vc_2 953 1260 2164 2483 F 308 84.74 1274 reject_low 16 ALIGNMENT 0 YS2-10p10.p1k vc_2 924 62 2106 2105 C 863 0.00 1257 reject_low 5 ALIGNMENT 111 YS2-10p10.q1k vc_4 953 1108 126 287 F 156 91.67 1274 reject_low 19 ALIGNMENT 0 YS2-10p10.q1k vc_4 954 953 5872 6353 F 0 0.00 1274 reject_low 20 ALIGNMENT 141 YS2-10p10.q1k vc_4 1260 953 5491 5812 C 308 84.09 1274 reject_low 18 ALIGNMENT 0 YS2-10p10.q1k vc_1 912 62 2513 2512 C 851 0.00 1274 reject_low 24 ALIGNMENT 0 YS2-10p10.q1k vc_2 912 62 2146 2145 C 851 0.00 1274 reject_low 25 ALIGNMENT 62 YS2-10p10.q1k vc_4 1037 953 1446 1534 C 85 92.94 1274 reject_low 21 ALIGNMENT 128 YS2-10p10.p1k vc_1 1157 925 1861 2105 C 233 86.70 1257 reject_low 4 ALIGNMENT 128 YS2-10p10.p1k vc_7 925 1157 100 344 F 233 86.70 1257 reject_low 3 ALIGNMENT 0 YS2-10p10.q1k vc_3 62 952 2531 2530 F 891 0.00 1274 reject_low 17 ALIGNMENT 128 YS2-10p10.p1k vc_3 1157 925 1861 2105 C 233 86.70 1257 reject_low 6 ALIGNMENT 0 YS2-10p10.q1k vc_1 62 952 2531 2530 F 891 0.00 1274 reject_low 15 ALIGNMENT 0 YS2-10p10.q1k vc_4 952 62 1535 1534 C 891 0.00 1274 reject_low 21 ALIGNMENT 38 YS2-10p10.q1k vc_3 953 913 2472 2512 C 41 97.56 1274 reject_low 26 ALIGNMENT 0 YS2-10p10.p1k vc_1 924 62 2106 2105 C 863 0.00 1257 reject_low 4 ALIGNMENT 0 YS2-10p10.p1k chr10 62 100 13476 13475 F 39 0.00 1257 reject_low 10 ALIGNMENT 38 YS2-10p10.q1k vc_4 913 953 5831 5871 F 41 97.56 1274 reject_low 20 ALIGNMENT 0 YS2-10p10.q1k vc_5 62 952 2398 2397 F 891 0.00 1274 reject_low 2 ALIGNMENT 0 YS2-10p10.q1k vc_2 62 952 2164 2163 F 891 0.00 1274 reject_low 16 ALIGNMENT 33 YS2-10p10.q1k vc_5 950 915 1 36 C 36 97.22 1274 reject_low 29 ALIGNMENT 38 YS2-10p10.q1k vc_2 953 913 2105 2145 C 41 97.56 1274 reject_low 25 ALIGNMENT 0 YS2-10p10.q1k chr14 62 82 752238 752237 F 21 0.00 1274 reject_low 14 ALIGNMENT 387 YS2-10p10.p1k chr10 101 907 13476 14282 F 807 83.40 1257 reject_low 10 ALIGNMENT 148 YS2-10p10.q1k vc_1 953 1260 2531 2850 F 308 84.74 1274 reject_low 15 ALIGNMENT 0 YS2-10p10.p1k chr14 163 62 752936 752935 C 102 0.00 1257 reject_low 13 ALIGNMENT 23 YS2-10p10.p1k vc_3 955 925 2441 2472 C 31 93.55 1257 reject_low 23 ALIGNMENT 0 YS2-10p10.q1k chr14 781 880 752935 752934 F 100 0.00 1274 reject_low 14 ALIGNMENT 0 YS2-10p10.q1k vc_4 62 952 126 125 F 891 0.00 1274 reject_low 19 ALIGNMENT 357 YS2-10p10.q1k chr09 746 36 13590 14299 C 711 84.25 1274 reject_low 12 ALIGNMENT 0 YS2-10p10.q1k vc_5 914 62 5064 5063 C 853 0.00 1274 reject_low 27 ALIGNMENT 0 YS2-10p10.p1k vc_7 62 924 13562 13561 F 863 0.00 1257 reject_low 8 ALIGNMENT 148 YS2-10p10.q1k vc_3 953 1260 2531 2850 F 308 84.74 1274 reject_low 17 ALIGNMENT 343 YS2-10p10.p1k chr14 861 164 752238 752935 C 698 83.67 1257 reject_low 13 ALIGNMENT 128 YS2-10p10.p1k vc_7 925 1157 13562 13806 F 233 86.70 1257 reject_low 8 ALIGNMENT 0 YS2-10p10.p1k vc_7 62 924 100 99 F 863 0.00 1257 reject_low 3 ALIGNMENT 0 YS2-10p10.p1k vc_1 924 62 2473 2472 C 863 0.00 1257 reject_low 22 ALIGNMENT 128 YS2-10p10.p1k vc_2 1157 925 1861 2105 C 233 86.70 1257 reject_low 5 ALIGNMENT 0 YS2-10p10.p1k chr09 62 197 13590 13589 F 136 0.00 1257 reject_low 11 ALIGNMENT 111 YS2-10p10.q1k vc_4 953 1108 6353 6514 F 156 91.67 1274|1,0 reject_low 20 ALIGNMENT 385 YS2-10p10.q1k chr10 913 36 13406 14282 C 878 82.12 1274 reject_low 9 ALIGNMENT 0 YS2-10p10.q1k vc_7 952 62 2728 2727 C 891 0.00 1274 reject_low 3 ALIGNMENT 128 YS2-10p10.p1k vc_4 925 1157 5871 6115 F 233 86.70 1257 reject_low 7 ALIGNMENT 340 YS2-10p10.q1k chr14 83 780 752238 752935 F 698 83.67 1274 reject_low 14 ALIGNMENT 0 YS2-10p10.p1k vc_4 62 924 5871 5870 F 863 0.00 1257 reject_low 7 ALIGNMENT 0 YS2-10p10.q1k vc_5 914 62 37 36 C 853 0.00 1274 reject_low 29 ALIGNMENT 0 YS2-10p10.p1k vc_3 924 62 2473 2472 C 863 0.00 1257 reject_low 23 ALIGNMENT 0 YS2-10p10.q1k vc_7 62 915 13525 13524 F 854 0.00 1274 reject_low 28 ALIGNMENT 35 YS2-10p10.q1k vc_7 916 953 13525 13562 F 38 97.37 1274 reject_low 28 ALIGNMENT 38 YS2-10p10.q1k vc_1 953 913 2472 2512 C 41 97.56 1274 reject_low 24 ALIGNMENT 128 YS2-10p10.p1k vc_5 1157 925 4781 5025 C 233 86.70 1257 reject_low 2 ALIGNMENT 360 YS2-10p10.p1k chr09 198 907 13590 14299 F 710 84.23 1257 reject_low 11 ALIGNMENT 148 YS2-10p10.q1k vc_5 953 1260 2398 2717 F 308 84.74 1274 reject_low 2 ALIGNMENT 843 YS2-10p10.q1k chr02 35 912 188706 189582 F 878 99.54 1274 accept_chi 1 ALIGNMENT 0 YS2-10p10.p1k vc_5 924 62 5026 5025 C 863 0.00 1257 reject_low 2 ALIGNMENT 0 YS2-10p10.p1k vc_3 924 62 2106 2105 C 863 0.00 1257 reject_low 6 ALIGNMENT 1039 YS2-10p12.p1k chr10 35 1220 206009 207207 F 1186 96.80 1312 accept 0 ALIGNMENT 950 YS2-10p12.q1k chr10 1151 51 209912 211019 C 1101 95.64 1301 accept 0 ALIGNMENT 103 YS2-10p13.q1k chr12 165 37 205370 205500 C 129 95.35 1251 reject_low 1 ALIGNMENT 0 YS2-10p13.q1k chr12 862 166 205371 205370 C 697 0.00 1251 reject_low 1 ALIGNMENT 0 YS2-10p13.q1k chr01 62 164 83511 83510 F 103 0.00 1251 accept 0 ALIGNMENT 1034 YS2-10p13.p1k chr01 1196 38 86693 87863 C 1159 97.41 1261 accept 0 ALIGNMENT 922 YS2-10p13.q1k chr01 165 1224 83511 84577 F 1060 96.70 1251 accept 0 ALIGNMENT 386 YS2-10p14.p1k chr04 468 41 884216 884646 C 428 98.13 1280|2,0 accept 0 ALIGNMENT 0 YS2-10p14.q1k chr07 62 516 817418 817417 F 455 0.00 1373 reject_low 6 ALIGNMENT 0 YS2-10p14.p1k chr04 878 879 878469 884057 C 0 0.00 1280 reject_low 31 ALIGNMENT 262 YS2-10p14.p1k chr13 1029 720 357025 357337 C 310 97.10 1280 reject_low 18 ALIGNMENT 0 YS2-10p14.q1k chr02 513 62 221357 221356 C 452 0.00 1373 reject_low 15 ALIGNMENT 218 YS2-10p14.q1k chr07 780 497 931739 932022 C 284 94.37 1373 reject_low 21 ALIGNMENT 0 YS2-10p14.q1k chr07 495 62 402295 402294 C 434 0.00 1373 reject_low 22 ALIGNMENT 0 YS2-10p14.q1k chr14 62 495 96609 96608 F 434 0.00 1373 reject_low 2 ALIGNMENT 236 YS2-10p14.p1k chr13 1029 720 372717 373035 C 310 94.52 1280 reject_low 14 ALIGNMENT 0 YS2-10p14.q1k chr04 670 62 871974 871973 C 609 0.00 1373 reject_low 29 ALIGNMENT 0 YS2-10p14.q1k chr10 496 62 472715 472714 C 435 0.00 1373 reject_low 24 ALIGNMENT 0 YS2-10p14.q1k chr07 496 62 932023 932022 C 435 0.00 1373 reject_low 21 ALIGNMENT 224 YS2-10p14.q1k chr13 497 780 362586 362869 F 284 95.07 1373 reject_low 14 ALIGNMENT 0 YS2-10p14.p1k chr13 62 721 184170 184169 F 660 0.00 1280 reject_low 13 ALIGNMENT 0 YS2-10p14.p1k chr14 719 62 96944 96943 C 658 0.00 1280 reject_low 2 ALIGNMENT 0 YS2-10p14.q1k chr13 516 62 190064 190063 C 455 0.00 1373 reject_low 11 ALIGNMENT 260 YS2-10p14.p1k chr07 722 1029 535215 535525 F 308 97.08 1280 reject_low 5 ALIGNMENT 263 YS2-10p14.p1k chr14 1051 720 96610 96943 C 332 95.48 1280 reject_low 2 ALIGNMENT 217 YS2-10p14.q1k chr13 780 517 184218 184481 C 264 96.21 1373 reject_low 13 ALIGNMENT 0 YS2-10p14.p1k chr07 62 917 817278 817277 F 856 0.00 1280 reject_low 26 ALIGNMENT 0 YS2-10p14.q1k chr15 516 62 600715 600714 C 455 0.00 1373 reject_low 7 ALIGNMENT 0 YS2-10p14.p1k chr04 62 917 877642 877641 F 856 0.00 1280 reject_low 27 ALIGNMENT 0 YS2-10p14.q1k chr15 713 639 594703 594702 C 75 0.00 1373 reject_low 28 ALIGNMENT 0 YS2-10p14.q1k chr08 62 516 543630 543629 F 455 0.00 1373 reject_low 10 ALIGNMENT 70 YS2-10p14.p1k chr04 1029 878 878319 878469 C 152 85.53 1280|0,1 reject_low 31 ALIGNMENT 262 YS2-10p14.p1k chr13 720 1029 189750 190062 F 310 97.10 1280 reject_low 11 ALIGNMENT 0 YS2-10p14.q1k chr14 62 496 102192 102191 F 435 0.00 1373 reject_low 20 ALIGNMENT 0 YS2-10p14.p1k chr11 721 62 458115 458114 C 660 0.00 1280 reject_low 1 ALIGNMENT 0 YS2-10p14.q1k chr13 516 62 184482 184481 C 455 0.00 1373 reject_low 13 ALIGNMENT 217 YS2-10p14.q1k chr13 780 517 189800 190063 C 264 96.21 1373 reject_low 11 ALIGNMENT 0 YS2-10p14.p1k chr02 62 719 265159 265158 F 658 0.00 1280 reject_low 9 ALIGNMENT 449 YS2-10p14.p1k chr04 981 464 877779 878297 C 518 97.68 1280|0,3 accept 0 ALIGNMENT 216 YS2-10p14.q1k chr07 780 496 402010 402294 C 285 94.04 1373 reject_low 22 ALIGNMENT 260 YS2-10p14.p1k chr11 1029 722 517116 517426 C 308 97.08 1280 reject_low 4 ALIGNMENT 262 YS2-10p14.p1k chr02 720 1029 265159 265471 F 310 97.10 1280 reject_low 9 ALIGNMENT 263 YS2-10p14.p1k chr13 1029 714 362607 362926 C 316 96.84 1280 reject_low 3 ALIGNMENT 0 YS2-10p14.q1k chr15 516 62 595133 595132 C 455 0.00 1373 reject_low 23 ALIGNMENT 220 YS2-10p14.q1k chr07 517 780 823000 823263 F 264 96.59 1373 reject_low 8 ALIGNMENT 239 YS2-10p14.p1k chr07 722 1052 535764 536102 F 331 93.66 1280 reject_low 17 ALIGNMENT 0 YS2-10p14.p1k chr04 466 467 878295 884217 C 0 0.00 1280 accept 0 ALIGNMENT 0 YS2-10p14.q1k chr15 580 62 594760 594759 C 519 0.00 1373 reject_low 28 ALIGNMENT 0 YS2-10p14.q1k chr07 495 62 535548 535547 C 434 0.00 1373 reject_low 5 ALIGNMENT 260 YS2-10p14.p1k chr02 722 1029 259576 259886 F 308 97.08 1280 reject_low 12 ALIGNMENT 53 YS2-10p14.p1k chr07 918 1024 817278 817383 F 107 85.05 1280 reject_low 26 ALIGNMENT 0 YS2-10p14.q1k chr07 62 516 823000 822999 F 455 0.00 1373 reject_low 8 ALIGNMENT 0 YS2-10p14.p1k chr02 62 721 221040 221039 F 660 0.00 1280 reject_low 15 ALIGNMENT 0 YS2-10p14.p1k chr14 750 864 102576 102575 F 115 0.00 1280 reject_low 30 ALIGNMENT 222 YS2-10p14.q1k chr07 780 496 535263 535547 C 285 94.74 1373 reject_low 5 ALIGNMENT 0 YS2-10p14.p1k chr14 721 62 102524 102523 C 660 0.00 1280 reject_low 16 ALIGNMENT 225 YS2-10p14.q1k chr13 496 780 357003 357287 F 285 95.09 1373 reject_low 3 ALIGNMENT 198 YS2-10p14.q1k chr10 780 497 472425 472714 C 284 92.25 1373 reject_low 24 ALIGNMENT 0 YS2-10p14.p1k chr13 719 62 373036 373035 C 658 0.00 1280 reject_low 14 ALIGNMENT 28 YS2-10p14.p1k chr14 721 749 102548 102576 F 29 100.00 1280 reject_low 30 ALIGNMENT 262 YS2-10p14.p1k chr08 1029 720 543631 543943 C 310 97.10 1280 reject_low 10 ALIGNMENT 0 YS2-10p14.q1k chr11 62 495 517094 517093 F 434 0.00 1373 reject_low 4 ALIGNMENT 217 YS2-10p14.q1k chr02 780 517 265209 265472 C 264 96.21 1373 reject_low 9 ALIGNMENT 0 YS2-10p14.p1k chr08 719 62 543944 543943 C 658 0.00 1280 reject_low 10 ALIGNMENT 228 YS2-10p14.q1k chr14 496 780 96609 96893 F 285 95.44 1373 reject_low 2 ALIGNMENT 50 YS2-10p14.p1k chr04 918 1024 877642 877747 F 107 84.11 1280 reject_low 27 ALIGNMENT 0 YS2-10p14.p1k chr13 62 719 189750 189749 F 658 0.00 1280 reject_low 11 ALIGNMENT 0 YS2-10p14.q1k chr02 516 62 259888 259887 C 455 0.00 1373 reject_low 12 ALIGNMENT 220 YS2-10p14.q1k chr15 780 517 594869 595132 C 264 96.59 1373 reject_low 23 ALIGNMENT 44 YS2-10p14.q1k chr15 638 581 594702 594759 C 58 93.10 1373 reject_low 28 ALIGNMENT 265 YS2-10p14.p1k chr15 720 1029 600401 600713 F 310 97.42 1280 reject_low 7 ALIGNMENT 0 YS2-10p14.p1k chr14 62 720 102548 102547 F 659 0.00 1280 reject_low 30 ALIGNMENT 260 YS2-10p14.p1k chr13 722 1029 184170 184480 F 308 97.08 1280 reject_low 13 ALIGNMENT 220 YS2-10p14.q1k chr07 517 780 817418 817681 F 264 96.59 1373 reject_low 6 ALIGNMENT 0 YS2-10p14.q1k chr13 62 496 362586 362585 F 435 0.00 1373 reject_low 14 ALIGNMENT 221 YS2-10p14.q1k chr11 475 780 457763 458066 F 306 93.46 1373 reject_low 1 ALIGNMENT 252 YS2-10p14.p1k chr11 1055 722 457779 458114 C 334 94.31 1280 reject_low 1 ALIGNMENT 0 YS2-10p14.p1k chr11 721 62 517427 517426 C 660 0.00 1280 reject_low 4 ALIGNMENT 0 YS2-10p14.p1k chr08 721 62 549638 549637 C 660 0.00 1280 reject_low 19 ALIGNMENT 0 YS2-10p14.q1k chr02 516 62 265473 265472 C 455 0.00 1373 reject_low 9 ALIGNMENT 0 YS2-10p14.q1k chr13 62 495 357003 357002 F 434 0.00 1373 reject_low 3 ALIGNMENT 43 YS2-10p14.q1k chr04 775 671 871869 871973 C 105 83.81 1373 reject_low 29 ALIGNMENT 217 YS2-10p14.q1k chr02 780 517 259624 259887 C 264 96.21 1373 reject_low 12 ALIGNMENT 213 YS2-10p14.q1k chr02 780 514 221088 221356 C 267 95.51 1373 reject_low 15 ALIGNMENT 71 YS2-10p14.p1k chr04 878 722 884058 884215 C 157 84.08 1280 reject_low 31 ALIGNMENT 0 YS2-10p14.p1k chr13 719 62 357338 357337 C 658 0.00 1280 reject_low 18 ALIGNMENT 0 YS2-10p14.p1k chr02 62 721 259576 259575 F 660 0.00 1280 reject_low 12 ALIGNMENT 0 YS2-10p14.p1k chr07 719 62 817732 817731 C 658 0.00 1280 reject_low 6 ALIGNMENT 262 YS2-10p14.p1k chr14 1052 722 102191 102523 C 331 95.47 1280 reject_low 16 ALIGNMENT 0 YS2-10p14.p1k chr07 62 721 535764 535763 F 660 0.00 1280 reject_low 17 ALIGNMENT 0 YS2-10p14.p1k chr15 62 719 600401 600400 F 658 0.00 1280 reject_low 7 ALIGNMENT 225 YS2-10p14.q1k chr11 496 780 517094 517378 F 285 95.09 1373 reject_low 4 ALIGNMENT 0 YS2-10p14.p1k chr13 713 62 362927 362926 C 652 0.00 1280 reject_low 3 ALIGNMENT 253 YS2-10p14.p1k chr02 722 1029 221040 221352 F 308 96.43 1280 reject_low 15 ALIGNMENT 257 YS2-10p14.p1k chr08 1029 722 549327 549637 C 308 96.75 1280 reject_low 19 ALIGNMENT 85 YS2-10p14.q1k chr07 775 520 817132 817387 C 256 81.25 1373 reject_low 25 ALIGNMENT 265 YS2-10p14.p1k chr07 1029 720 817419 817731 C 310 97.42 1280 reject_low 6 ALIGNMENT 0 YS2-10p14.p1k chr07 721 62 823312 823311 C 660 0.00 1280 reject_low 8 ALIGNMENT 0 YS2-10p14.p1k chr07 62 721 535215 535214 F 660 0.00 1280 reject_low 5 ALIGNMENT 0 YS2-10p14.q1k chr07 519 62 817388 817387 C 458 0.00 1373 reject_low 25 ALIGNMENT 451 YS2-10p14.q1k chr04 39 563 871285 871810 F 525 97.71 1373 accept 0 ALIGNMENT 227 YS2-10p14.q1k chr14 497 780 102192 102475 F 284 95.42 1373 reject_low 20 ALIGNMENT 220 YS2-10p14.q1k chr15 780 517 600451 600714 C 264 96.59 1373 reject_low 7 ALIGNMENT 0 YS2-10p14.q1k chr04 564 713 871810 871809 F 150 0.00 1373 accept 0 ALIGNMENT 263 YS2-10p14.p1k chr07 1029 722 823001 823311 C 308 97.40 1280 reject_low 8 ALIGNMENT 0 YS2-10p14.p1k chr04 721 62 884216 884215 C 660 0.00 1280 reject_low 31 ALIGNMENT 217 YS2-10p14.q1k chr08 517 780 543630 543893 F 264 96.21 1373 reject_low 10 ALIGNMENT 0 YS2-10p14.q1k chr11 62 474 457763 457762 F 413 0.00 1373 reject_low 1 ALIGNMENT 47 YS2-10p16.q1k vc_7 422 303 4583 4699 C 120 81.67 735 reject_vc 7 ALIGNMENT 0 YS2-10p16.q1k vc_4 237 62 6340 6339 C 176 0.00 735 reject_vc 9 ALIGNMENT 270 YS2-10p16.q1k vc_1 1 301 2689 2991 F 301 97.01 735 reject_vc 4 ALIGNMENT 41 YS2-10p16.q1k vc_4 302 238 6273 6339 C 65 89.23 735 reject_vc 9 ALIGNMENT 0 YS2-10p16.q1k vc_7 53 54 5172 6360 C 0 0.00 735 reject_vc 7 ALIGNMENT 51 YS2-10p16.q1k vc_7 54 3 6360 6411 C 52 100.00 735|1,0 reject_vc 7 ALIGNMENT 0 YS2-10p16.p1k chr04 283 299 1483810 1483809 F 17 0.00 299 accept 0 ALIGNMENT 0 YS2-10p16.q1k vc_4 237 62 113 112 C 176 0.00 735 reject_vc 8 ALIGNMENT 231 YS2-10p16.p1k chr04 37 282 1483565 1483810 F 246 100.00 299 accept 0 ALIGNMENT 0 YS2-10p16.q1k vc_7 302 302 4700 4921 C 1 0.00 735 reject_vc 7 ALIGNMENT 215 YS2-10p16.q1k vc_7 301 53 4922 5172 C 249 95.98 735|0,1 reject_vc 7 ALIGNMENT 270 YS2-10p16.q1k vc_3 1 301 2689 2991 F 301 97.01 735 reject_vc 6 ALIGNMENT 50 YS2-10p16.q1k vc_4 306 486 1879 2052 F 181 78.45 735 reject_vc 10 ALIGNMENT 0 YS2-10p16.q1k vc_4 62 237 1548 1547 F 176 0.00 735 reject_vc 10 ALIGNMENT 41 YS2-10p16.q1k vc_4 302 238 46 112 C 65 89.23 735 reject_vc 8 ALIGNMENT 325 YS2-10p16.q1k vc_7 486 1 2089 2569 C 486 90.12 735 reject_vc 2 ALIGNMENT 313 YS2-10p16.q1k vc_4 422 1 5232 5654 C 422 92.18 735 reject_vc 3 ALIGNMENT 41 YS2-10p16.q1k vc_4 238 302 1548 1614 F 65 89.23 735 reject_vc 10 ALIGNMENT 326 YS2-10p16.q1k vc_5 1 486 2556 3036 F 486 90.12 735 reject_vc 1 ALIGNMENT 0 YS2-10p16.q1k vc_4 303 305 1615 1878 F 3 0.00 735 reject_vc 10 ALIGNMENT 270 YS2-10p16.q1k vc_2 1 301 2322 2624 F 301 97.01 735 reject_vc 5 ALIGNMENT 713 YS2-10p17.p1k chr06 1010 16 42999 43976 C 995 92.66 1344 accept 0 ALIGNMENT 929 YS2-10p17.q1k chr06 49 1158 39625 40753 F 1110 95.32 1219 accept 0 ALIGNMENT 998 YS2-10p18.q1k chr13 42 1178 218304 219446 F 1137 96.48 1243 accept 0 ALIGNMENT 1068 YS2-10p18.p1k chr13 1286 35 219950 221190 C 1252 95.61 1332 accept 0 ALIGNMENT 128 YS2-10p19.q1k chr14 876 731 282717 282862 C 146 97.26 1265 reject_low 5 ALIGNMENT 0 YS2-10p19.q1k chr14 546 62 282627 282626 C 485 0.00 1265 reject_low 7 ALIGNMENT 671 YS2-10p19.p1k chr14 31 828 277832 278626 F 798 96.12 1221 accept 0 ALIGNMENT 127 YS2-10p19.q1k chr14 696 551 282537 282682 C 146 97.26 1265 reject_low 6 ALIGNMENT 0 YS2-10p19.q1k chr14 550 62 282683 282682 C 489 0.00 1265 reject_low 6 ALIGNMENT 0 YS2-10p19.q1k chr14 546 62 282807 282806 C 485 0.00 1265 reject_low 2 ALIGNMENT 0 YS2-10p19.q1k chr14 546 62 282747 282746 C 485 0.00 1265 reject_low 4 ALIGNMENT 65 YS2-10p19.q1k chr14 636 547 282537 282626 C 90 92.22 1265 reject_low 7 ALIGNMENT 0 YS2-10p19.q1k chr14 873 577 282538 282537 C 297 0.00 1265 reject_low 9 ALIGNMENT 157 YS2-10p19.q1k chr14 756 547 282537 282746 C 210 93.33 1265 reject_low 4 ALIGNMENT 159 YS2-10p19.q1k chr14 876 667 282657 282866 C 210 93.33 1265 reject_low 3 ALIGNMENT 0 YS2-10p19.q1k chr14 850 62 282863 282862 C 789 0.00 1265 reject_low 10 ALIGNMENT 0 YS2-10p19.q1k chr14 873 697 282538 282537 C 177 0.00 1265 reject_low 6 ALIGNMENT 0 YS2-10p19.q1k chr14 873 757 282538 282537 C 117 0.00 1265 reject_low 4 ALIGNMENT 1017 YS2-10p19.q1k chr14 1162 45 282245 283369 C 1118 97.67 1265 accept 0 ALIGNMENT 0 YS2-10p19.q1k chr14 873 637 282538 282537 C 237 0.00 1265 reject_low 7 ALIGNMENT 0 YS2-10p19.q1k chr14 606 62 282867 282866 C 545 0.00 1265 reject_low 1 ALIGNMENT 0 YS2-10p19.q1k chr14 666 62 282867 282866 C 605 0.00 1265 reject_low 3 ALIGNMENT 0 YS2-10p19.q1k chr14 550 62 282563 282562 C 489 0.00 1265 reject_low 9 ALIGNMENT 194 YS2-10p19.q1k chr14 876 607 282597 282866 C 270 92.22 1265 reject_low 1 ALIGNMENT 0 YS2-10p19.q1k chr14 730 62 282863 282862 C 669 0.00 1265 reject_low 5 ALIGNMENT 25 YS2-10p19.q1k chr14 876 851 282837 282862 C 26 100.00 1265 reject_low 10 ALIGNMENT 65 YS2-10p19.q1k chr14 876 787 282777 282866 C 90 92.22 1265 reject_low 8 ALIGNMENT 0 YS2-10p19.q1k chr14 873 817 282538 282537 C 57 0.00 1265 reject_low 2 ALIGNMENT 25 YS2-10p19.q1k chr14 576 551 282537 282562 C 26 100.00 1265 reject_low 9 ALIGNMENT 193 YS2-10p19.q1k chr14 816 547 282537 282806 C 270 92.22 1265 reject_low 2 ALIGNMENT 0 YS2-10p19.q1k chr14 786 62 282867 282866 C 725 0.00 1265 reject_low 8 ALIGNMENT 952 YS2-10p22.p1k chr14 1122 30 361307 362413 C 1093 97.26 1244 accept 0 ALIGNMENT 883 YS2-10p22.q1k chr14 37 1059 357258 358285 F 1023 95.99 1166 accept 0 ALIGNMENT 0 YS2-10p24.p1k chr08 62 922 212033 212032 F 861 0.00 1234 reject_low 1 ALIGNMENT 895 YS2-10p24.q1k chr08 1169 35 212744 213870 C 1135 95.42 1203 reject_low 1 ALIGNMENT 803 YS2-10p24.p1k chr08 43 924 212991 213871 F 882 99.32 1234 accept 0 ALIGNMENT 803 YS2-10p24.p1k chr08 43 924 214989 215869 F 882 99.32 1234 reject_low 2 ALIGNMENT 895 YS2-10p24.q1k chr08 1169 35 214742 215868 C 1135 95.42 1203 accept 0 ALIGNMENT 131 YS2-10p24.p1k chr08 923 1231 212033 212347 F 309 84.79 1234 reject_low 1 ALIGNMENT 990 YS2-11a01.p1k chr12 30 1162 746002 747132 F 1133 97.26 1163 accept 0 ALIGNMENT 937 YS2-11a01.q1k chr12 1124 35 750300 751393 C 1090 98.17 1126 accept 0 ALIGNMENT 36 YS2-11a02.q1k vc_5 268 233 1 36 C 36 100.00 271 reject_vc 5 ALIGNMENT 0 YS2-11a02.q1k vc_7 62 233 13525 13524 F 172 0.00 271 reject_vc 4 ALIGNMENT 0 YS2-11a02.q1k vc_5 232 62 37 36 C 171 0.00 271 reject_vc 5 ALIGNMENT 0 YS2-11a02.q1k vc_3 230 62 2513 2512 C 169 0.00 271 reject_vc 1 ALIGNMENT 38 YS2-11a02.q1k vc_7 234 271 13525 13562 F 38 100.00 271 reject_vc 4 ALIGNMENT 41 YS2-11a02.q1k vc_1 271 231 2472 2512 C 41 100.00 271 reject_vc 0 ALIGNMENT 39 YS2-11a02.q1k vc_5 271 233 5025 5063 C 39 100.00 271 reject_vc 3 ALIGNMENT 0 YS2-11a02.q1k vc_4 62 230 5831 5830 F 169 0.00 271 reject_vc 2 ALIGNMENT 41 YS2-11a02.q1k vc_3 271 231 2472 2512 C 41 100.00 271 reject_vc 1 ALIGNMENT 41 YS2-11a02.q1k vc_4 231 271 5831 5871 F 41 100.00 271 reject_vc 2 ALIGNMENT 0 YS2-11a02.q1k vc_5 232 62 5064 5063 C 171 0.00 271 reject_vc 3 ALIGNMENT 0 YS2-11a02.q1k vc_1 230 62 2513 2512 C 169 0.00 271 reject_vc 0 ALIGNMENT 856 YS2-11a03.q1k chr12 981 46 465999 466934 C 936 98.08 984 accept_chi 2 ALIGNMENT 856 YS2-11a03.q1k chr12 981 46 456862 457797 C 936 98.08 984 accept_chi 1 ALIGNMENT 980 YS2-11a03.p1k chr02 1169 31 321604 322741 C 1139 96.05 1173 accept_chi 0 ALIGNMENT 847 YS2-11a04.q1k chr08 29 965 259563 260496 F 937 98.08 968 accept 0 ALIGNMENT 945 YS2-11a04.p1k chr08 1076 26 264284 265348 C 1051 98.00 1197 accept 0 ALIGNMENT 878 YS2-11a05.q1k chr07 100 1170 197018 198102 F 1071 95.14 1197 accept 0 ALIGNMENT 1009 YS2-11a05.p1k chr07 1189 29 197193 198357 C 1161 96.21 1208 accept 0 ALIGNMENT 0 YS2-11a05.q1k chr07 99 99 196997 197017 F 1 0.00 1197 accept 0 ALIGNMENT 45 YS2-11a05.q1k chr07 34 98 196930 196996 F 65 90.77 1197 accept 0 ALIGNMENT 0 YS2-11a06.p1k chr12 347 330 466859 466858 C 18 0.00 347 accept 0 ALIGNMENT 41 YS2-11a06.q1k vc_4 330 370 5831 5871 F 41 100.00 370 reject_low 5 ALIGNMENT 0 YS2-11a06.q1k vc_1 329 62 2513 2512 C 268 0.00 370 reject_low 3 ALIGNMENT 268 YS2-11a06.p1k chr12 329 30 457721 458027 C 300 97.33 347 reject_low 1 ALIGNMENT 0 YS2-11a06.q1k chr12 330 370 458027 458026 F 41 0.00 370 accept 0 ALIGNMENT 0 YS2-11a06.q1k vc_5 331 62 37 36 C 270 0.00 370 reject_low 8 ALIGNMENT 0 YS2-11a06.q1k vc_4 62 329 5831 5830 F 268 0.00 370 reject_low 5 ALIGNMENT 0 YS2-11a06.q1k chr12 330 370 467164 467163 F 41 0.00 370 reject_low 2 ALIGNMENT 0 YS2-11a06.p1k chr12 347 330 457722 457721 C 18 0.00 347 reject_low 1 ALIGNMENT 268 YS2-11a06.p1k chr12 329 30 466858 467164 C 300 97.33 347 accept 0 ALIGNMENT 39 YS2-11a06.q1k vc_5 370 332 5025 5063 C 39 100.00 370 reject_low 6 ALIGNMENT 0 YS2-11a06.q1k vc_3 329 62 2513 2512 C 268 0.00 370 reject_low 4 ALIGNMENT 38 YS2-11a06.q1k vc_7 333 370 13525 13562 F 38 100.00 370 reject_low 7 ALIGNMENT 0 YS2-11a06.q1k vc_7 62 332 13525 13524 F 271 0.00 370 reject_low 7 ALIGNMENT 41 YS2-11a06.q1k vc_3 370 330 2472 2512 C 41 100.00 370 reject_low 4 ALIGNMENT 41 YS2-11a06.q1k vc_1 370 330 2472 2512 C 41 100.00 370 reject_low 3 ALIGNMENT 36 YS2-11a06.q1k vc_5 367 332 1 36 C 36 100.00 370 reject_low 8 ALIGNMENT 263 YS2-11a06.q1k chr12 28 329 457721 458027 F 302 96.69 370 accept 0 ALIGNMENT 263 YS2-11a06.q1k chr12 28 329 466858 467164 F 302 96.69 370 reject_low 2 ALIGNMENT 0 YS2-11a06.q1k vc_5 331 62 5064 5063 C 270 0.00 370 reject_low 6 ALIGNMENT 0 YS2-11a07.p1k vc_1 823 62 2106 2105 C 762 0.00 1173 reject_low 2 ALIGNMENT 0 YS2-11a07.p1k vc_4 62 823 5871 5870 F 762 0.00 1173 reject_low 5 ALIGNMENT 752 YS2-11a07.p1k chr12 805 35 387145 387915 C 771 99.35 1173 accept_chi 0 ALIGNMENT 250 YS2-11a07.p1k vc_5 1172 824 4674 5025 C 349 90.83 1173 reject_low 6 ALIGNMENT 0 YS2-11a07.p1k chr12 900 806 387146 387145 C 95 0.00 1173 accept_chi 0 ALIGNMENT 250 YS2-11a07.p1k vc_1 1172 824 1754 2105 C 349 90.83 1173 reject_low 2 ALIGNMENT 250 YS2-11a07.p1k vc_3 1172 824 1754 2105 C 349 90.83 1173 reject_low 4 ALIGNMENT 0 YS2-11a07.p1k vc_1 823 62 2473 2472 C 762 0.00 1173 reject_low 9 ALIGNMENT 0 YS2-11a07.p1k vc_3 900 855 2442 2441 C 46 0.00 1173 reject_low 10 ALIGNMENT 0 YS2-11a07.p1k vc_3 823 62 2106 2105 C 762 0.00 1173 reject_low 4 ALIGNMENT 0 YS2-11a07.p1k vc_1 900 855 2442 2441 C 46 0.00 1173 reject_low 9 ALIGNMENT 750 YS2-11a07.q1k chr12 37 811 387145 387919 F 775 99.10 812 accept_chi 1 ALIGNMENT 250 YS2-11a07.p1k vc_2 1172 824 1754 2105 C 349 90.83 1173 reject_low 3 ALIGNMENT 26 YS2-11a07.p1k vc_1 854 824 2441 2472 C 31 96.77 1173 reject_low 9 ALIGNMENT 0 YS2-11a07.p1k vc_5 823 62 5026 5025 C 762 0.00 1173 reject_low 6 ALIGNMENT 250 YS2-11a07.p1k vc_7 824 1172 13562 13913 F 349 90.83 1173 reject_low 8 ALIGNMENT 250 YS2-11a07.p1k vc_4 824 1172 5871 6222 F 349 90.83 1173 reject_low 5 ALIGNMENT 0 YS2-11a07.p1k vc_7 62 823 13562 13561 F 762 0.00 1173 reject_low 8 ALIGNMENT 0 YS2-11a07.p1k vc_7 62 823 100 99 F 762 0.00 1173 reject_low 7 ALIGNMENT 26 YS2-11a07.p1k vc_3 854 824 2441 2472 C 31 96.77 1173 reject_low 10 ALIGNMENT 0 YS2-11a07.p1k vc_3 823 62 2473 2472 C 762 0.00 1173 reject_low 10 ALIGNMENT 0 YS2-11a07.p1k vc_2 823 62 2106 2105 C 762 0.00 1173 reject_low 3 ALIGNMENT 250 YS2-11a07.p1k vc_7 824 1172 100 451 F 349 90.83 1173 reject_low 7 ALIGNMENT 906 YS2-11a08.p1k chr02 1151 35 745497 746630 C 1117 94.72 1214 accept 0 ALIGNMENT 874 YS2-11a08.q1k chr02 35 1128 742918 744027 F 1094 94.33 1155 accept 0 ALIGNMENT 0 YS2-11a09.q1k vc_5 454 62 5064 5063 C 393 0.00 493 reject_low 5 ALIGNMENT 39 YS2-11a09.q1k vc_5 493 455 5025 5063 C 39 100.00 493 reject_low 5 ALIGNMENT 0 YS2-11a09.q1k chr08 493 453 75050 75049 C 41 0.00 493 accept_chi 1 ALIGNMENT 36 YS2-11a09.q1k vc_5 490 455 1 36 C 36 100.00 493 reject_low 7 ALIGNMENT 41 YS2-11a09.q1k vc_4 453 493 5831 5871 F 41 100.00 493 reject_low 4 ALIGNMENT 38 YS2-11a09.q1k vc_7 456 493 13525 13562 F 38 100.00 493 reject_low 6 ALIGNMENT 393 YS2-11a09.p1k chr08 37 461 75049 75473 F 425 99.76 479 accept_chi 0 ALIGNMENT 0 YS2-11a09.q1k vc_3 452 62 2513 2512 C 391 0.00 493 reject_low 3 ALIGNMENT 41 YS2-11a09.q1k vc_1 493 453 2472 2512 C 41 100.00 493 reject_low 2 ALIGNMENT 0 YS2-11a09.q1k vc_1 452 62 2513 2512 C 391 0.00 493 reject_low 2 ALIGNMENT 0 YS2-11a09.q1k vc_7 62 455 13525 13524 F 394 0.00 493 reject_low 6 ALIGNMENT 0 YS2-11a09.p1k chr08 462 479 75473 75472 F 18 0.00 479 accept_chi 0 ALIGNMENT 390 YS2-11a09.q1k chr08 452 28 75049 75473 C 425 99.53 493 accept_chi 1 ALIGNMENT 0 YS2-11a09.q1k vc_4 62 452 5831 5830 F 391 0.00 493 reject_low 4 ALIGNMENT 0 YS2-11a09.q1k vc_5 454 62 37 36 C 393 0.00 493 reject_low 7 ALIGNMENT 41 YS2-11a09.q1k vc_3 493 453 2472 2512 C 41 100.00 493 reject_low 3 ALIGNMENT 0 YS2-11a11.q1k chr15 62 211 932614 932613 F 150 0.00 1081 reject_low 1 ALIGNMENT 0 YS2-11a11.q1k chr04 738 860 1280511 1280510 F 123 0.00 1081 reject_low 2 ALIGNMENT 124 YS2-11a11.q1k chr15 212 808 932614 933210 F 597 73.70 1081 reject_low 1 ALIGNMENT 0 YS2-11a11.q1k chr15 809 860 933210 933209 F 52 0.00 1081 reject_low 1 ALIGNMENT 962 YS2-11a11.p1k chr15 1203 61 625322 626455 C 1143 96.41 1208 accept 0 ALIGNMENT 0 YS2-11a11.q1k chr04 62 370 1280145 1280144 F 309 0.00 1081 reject_low 2 ALIGNMENT 929 YS2-11a11.q1k chr15 53 1079 620435 621457 F 1027 97.76 1081 accept 0 ALIGNMENT 131 YS2-11a11.q1k chr04 371 737 1280145 1280511 F 367 78.75 1081 reject_low 2 ALIGNMENT 1021 YS2-11a12.p1k chr04 1233 32 1298393 1299592 C 1202 96.59 1240 accept_chi 0 ALIGNMENT 949 YS2-11a12.q1k chr11 35 1096 434785 435841 F 1062 97.83 1098 accept_chi 1 ALIGNMENT 0 YS2-11a13.p1k scplasm1 62 350 3897 3896 F 289 0.00 1173 reject_low 4 ALIGNMENT 98 YS2-11a13.q1k scplasm1 1044 814 716 936 C 231 85.28 1115 reject_low 1 ALIGNMENT 0 YS2-11a13.p1k scplasm1 902 388 721 720 C 515 0.00 1173 reject_low 3 ALIGNMENT 0 YS2-11a13.p1k vc_6 156 902 6535 6534 F 747 0.00 1173 reject_low 2 ALIGNMENT 119 YS2-11a13.p1k vc_6 29 155 6409 6535 F 127 98.43 1173 reject_low 2 ALIGNMENT 0 YS2-11a13.q1k scplasm1 813 62 937 936 C 752 0.00 1115 reject_low 1 ALIGNMENT 22 YS2-11a13.p1k scplasm1 387 351 720 756 C 37 86.49 1173 reject_low 3 ALIGNMENT 0 YS2-11a13.p1k scplasm1 569 902 936 935 F 334 0.00 1173 reject_low 1 ALIGNMENT 97 YS2-11a13.q1k scplasm1 37 247 2744 2955 F 211 82.94 1115 reject_bad_break 0 ALIGNMENT 484 YS2-11a13.p1k scplasm1 29 568 398 936 F 540 97.04 1173 reject_low 1 ALIGNMENT 0 YS2-11a13.p1k scplasm1 350 62 757 756 C 289 0.00 1173 reject_low 3 ALIGNMENT 546 YS2-11a13.p1k scplasm1 1053 29 3225 4255 C 1025 85.95 1173 reject_bad_break 0 ALIGNMENT 22 YS2-11a13.p1k scplasm1 351 387 3897 3933 F 37 86.49 1173 reject_low 4 ALIGNMENT 170 YS2-11a13.q1k scplasm1 291 1031 3188 3926 F 741 77.33 1115 reject_bad_break 0 ALIGNMENT 0 YS2-11a13.q1k scplasm1 248 290 2956 3187 F 43 0.00 1115 reject_bad_break 0 ALIGNMENT 0 YS2-11a13.p1k scplasm1 388 902 3933 3932 F 515 0.00 1173 reject_low 4 ALIGNMENT 0 YS2-11a14.q1k vc_4 62 396 5831 5830 F 335 0.00 437 reject_low 5 ALIGNMENT 38 YS2-11a14.q1k vc_7 400 437 13525 13562 F 38 100.00 437 reject_low 7 ALIGNMENT 41 YS2-11a14.q1k vc_3 437 397 2472 2512 C 41 100.00 437 reject_low 4 ALIGNMENT 328 YS2-11a14.p1k chr04 26 383 324910 325270 F 358 98.88 402 accept_chi 1 ALIGNMENT 0 YS2-11a14.q1k vc_3 396 62 2513 2512 C 335 0.00 437 reject_low 4 ALIGNMENT 0 YS2-11a14.q1k chr04 437 398 324911 324910 C 40 0.00 437 accept_chi 0 ALIGNMENT 0 YS2-11a14.q1k vc_5 398 62 5064 5063 C 337 0.00 437 reject_low 6 ALIGNMENT 0 YS2-11a14.q1k vc_7 62 399 13525 13524 F 338 0.00 437 reject_low 7 ALIGNMENT 0 YS2-11a14.q1k vc_1 396 62 2513 2512 C 335 0.00 437 reject_low 2 ALIGNMENT 0 YS2-11a14.p1k chr04 384 402 325270 325269 F 19 0.00 402 accept_chi 1 ALIGNMENT 0 YS2-11a14.q1k vc_2 396 62 2146 2145 C 335 0.00 437 reject_low 3 ALIGNMENT 39 YS2-11a14.q1k vc_5 437 399 5025 5063 C 39 100.00 437 reject_low 6 ALIGNMENT 36 YS2-11a14.q1k vc_5 434 399 1 36 C 36 100.00 437 reject_low 8 ALIGNMENT 343 YS2-11a14.q1k chr04 397 37 324910 325270 C 361 99.72 437 accept_chi 0 ALIGNMENT 0 YS2-11a14.q1k vc_5 398 62 37 36 C 337 0.00 437 reject_low 8 ALIGNMENT 41 YS2-11a14.q1k vc_2 437 397 2105 2145 C 41 100.00 437 reject_low 3 ALIGNMENT 41 YS2-11a14.q1k vc_1 437 397 2472 2512 C 41 100.00 437 reject_low 2 ALIGNMENT 41 YS2-11a14.q1k vc_4 397 437 5831 5871 F 41 100.00 437 reject_low 5 ALIGNMENT 41 YS2-11a15.q1k vc_4 458 498 5831 5871 F 41 100.00 498 reject_low 12 ALIGNMENT 0 YS2-11a15.q1k chr12 458 498 459725 459724 F 41 0.00 498 accept 0 ALIGNMENT 42 YS2-11a15.p1k chr12 77 27 489348 489398 C 51 94.12 464 reject_low 6 ALIGNMENT 0 YS2-11a15.q1k vc_2 457 62 2146 2145 C 396 0.00 498 reject_low 10 ALIGNMENT 0 YS2-11a15.p1k chr12 464 78 472465 472464 C 387 0.00 464 reject_low 1 ALIGNMENT 0 YS2-11a15.q1k vc_5 459 62 37 36 C 398 0.00 498 reject_low 15 ALIGNMENT 42 YS2-11a15.p1k chr12 77 27 472464 472514 C 51 94.12 464 reject_low 1 ALIGNMENT 0 YS2-11a15.q1k vc_5 459 62 5064 5063 C 398 0.00 498 reject_low 13 ALIGNMENT 36 YS2-11a15.q1k vc_5 495 460 1 36 C 36 100.00 498 reject_low 15 ALIGNMENT 94 YS2-11a15.p1k chr06 337 444 31622 31729 F 108 98.15 464 reject_low 3 ALIGNMENT 0 YS2-11a15.q1k vc_7 62 460 13525 13524 F 399 0.00 498 reject_low 14 ALIGNMENT 41 YS2-11a15.q1k vc_1 498 458 2472 2512 C 41 100.00 498 reject_low 9 ALIGNMENT 0 YS2-11a15.q1k chr06 498 148 31623 31622 C 351 0.00 498 reject_low 7 ALIGNMENT 38 YS2-11a15.q1k vc_7 461 498 13525 13562 F 38 100.00 498 reject_low 14 ALIGNMENT 0 YS2-11a15.q1k chr12 458 498 468862 468861 F 41 0.00 498 reject_low 1 ALIGNMENT 39 YS2-11a15.q1k vc_5 498 460 5025 5063 C 39 100.00 498 reject_low 13 ALIGNMENT 384 YS2-11a15.q1k chr12 37 457 459307 459725 F 421 99.05 498 accept 0 ALIGNMENT 0 YS2-11a15.p1k chr12 464 78 485697 485696 C 387 0.00 464 reject_low 5 ALIGNMENT 0 YS2-11a15.q1k chr12 458 498 485746 485745 F 41 0.00 498 reject_low 6 ALIGNMENT 0 YS2-11a15.q1k vc_1 457 62 2513 2512 C 396 0.00 498 reject_low 9 ALIGNMENT 0 YS2-11a15.q1k vc_4 62 457 5831 5830 F 396 0.00 498 reject_low 12 ALIGNMENT 51 YS2-11a15.q1k chr12 407 457 485696 485746 F 51 100.00 498 reject_low 6 ALIGNMENT 42 YS2-11a15.p1k chr12 77 27 482044 482094 C 51 94.12 464 reject_low 4 ALIGNMENT 0 YS2-11a15.q1k chr12 458 498 489398 489397 F 41 0.00 498 reject_low 8 ALIGNMENT 0 YS2-11a15.p1k chr06 445 464 31729 31728 F 20 0.00 464 reject_low 3 ALIGNMENT 51 YS2-11a15.q1k chr12 407 457 472464 472514 F 51 100.00 498 reject_low 4 ALIGNMENT 0 YS2-11a15.q1k vc_3 457 62 2513 2512 C 396 0.00 498 reject_low 11 ALIGNMENT 385 YS2-11a15.p1k chr12 445 27 468444 468862 C 419 99.05 464 accept 0 ALIGNMENT 42 YS2-11a15.p1k chr12 77 27 485696 485746 C 51 94.12 464 reject_low 5 ALIGNMENT 0 YS2-11a15.p1k chr06 62 336 31622 31621 F 275 0.00 464 reject_low 3 ALIGNMENT 0 YS2-11a15.q1k chr12 62 406 489348 489347 F 345 0.00 498 reject_low 8 ALIGNMENT 0 YS2-11a15.q1k chr12 62 406 485696 485695 F 345 0.00 498 reject_low 6 ALIGNMENT 0 YS2-11a15.p1k chr12 464 446 468445 468444 C 19 0.00 464 accept 0 ALIGNMENT 51 YS2-11a15.q1k chr12 407 457 482044 482094 F 51 100.00 498 reject_low 5 ALIGNMENT 41 YS2-11a15.q1k vc_2 498 458 2105 2145 C 41 100.00 498 reject_low 10 ALIGNMENT 41 YS2-11a15.q1k vc_3 498 458 2472 2512 C 41 100.00 498 reject_low 11 ALIGNMENT 384 YS2-11a15.q1k chr12 37 457 468444 468862 F 421 99.05 498 reject_low 1 ALIGNMENT 0 YS2-11a15.q1k chr12 62 406 482044 482043 F 345 0.00 498 reject_low 5 ALIGNMENT 0 YS2-11a15.p1k chr12 464 78 489349 489348 C 387 0.00 464 reject_low 6 ALIGNMENT 0 YS2-11a15.q1k chr12 458 498 482094 482093 F 41 0.00 498 reject_low 5 ALIGNMENT 0 YS2-11a15.p1k chr12 464 446 459308 459307 C 19 0.00 464 reject_low 2 ALIGNMENT 85 YS2-11a15.q1k chr06 147 38 31622 31729 C 110 95.45 498 reject_low 7 ALIGNMENT 0 YS2-11a15.q1k chr12 458 498 472514 472513 F 41 0.00 498 reject_low 4 ALIGNMENT 51 YS2-11a15.q1k chr12 407 457 489348 489398 F 51 100.00 498 reject_low 8 ALIGNMENT 385 YS2-11a15.p1k chr12 445 27 459307 459725 C 419 99.05 464 reject_low 2 ALIGNMENT 0 YS2-11a15.q1k chr12 62 406 472464 472463 F 345 0.00 498 reject_low 4 ALIGNMENT 0 YS2-11a15.p1k chr12 464 78 482045 482044 C 387 0.00 464 reject_low 4 ALIGNMENT 38 YS2-11a17.q1k vc_7 923 960 13525 13562 F 38 100.00 1111 reject_low 21 ALIGNMENT 823 YS2-11a17.p1k chr13 63 948 125378 126261 F 886 98.65 1210 accept 0 ALIGNMENT 0 YS2-11a17.q1k vc_5 921 62 37 36 C 860 0.00 1111 reject_low 22 ALIGNMENT 100 YS2-11a17.q1k vc_2 960 1110 2164 2315 F 151 90.07 1111 reject_low 9 ALIGNMENT 0 YS2-11a17.q1k vc_7 62 922 13525 13524 F 861 0.00 1111 reject_low 21 ALIGNMENT 100 YS2-11a17.q1k vc_7 1110 960 2576 2727 C 151 90.07 1111 reject_low 2 ALIGNMENT 0 YS2-11a17.q1k vc_1 919 62 2513 2512 C 858 0.00 1111 reject_low 17 ALIGNMENT 0 YS2-11a17.q1k vc_4 959 62 5813 5812 C 898 0.00 1111 reject_low 12 ALIGNMENT 100 YS2-11a17.q1k vc_1 960 1110 2531 2682 F 151 90.07 1111 reject_low 8 ALIGNMENT 62 YS2-11a17.q1k vc_4 1038 960 1456 1534 C 79 91.14 1111 reject_low 14 ALIGNMENT 0 YS2-11a17.q1k vc_3 62 959 2531 2530 F 898 0.00 1111 reject_low 10 ALIGNMENT 36 YS2-11a17.q1k vc_5 957 922 1 36 C 36 100.00 1111 reject_low 22 ALIGNMENT 0 YS2-11a17.q1k vc_5 62 959 2398 2397 F 898 0.00 1111 reject_low 1 ALIGNMENT 0 YS2-11a17.p1k vc_7 77 965 13562 13561 F 889 0.00 1210 reject_low 7 ALIGNMENT 100 YS2-11a17.q1k vc_4 1110 960 5661 5812 C 151 90.07 1111 reject_low 12 ALIGNMENT 100 YS2-11a17.q1k vc_3 960 1110 2531 2682 F 151 90.07 1111 reject_low 10 ALIGNMENT 157 YS2-11a17.p1k vc_7 966 1206 13562 13795 F 241 90.46 1210 reject_low 7 ALIGNMENT 41 YS2-11a17.q1k vc_3 960 920 2472 2512 C 41 100.00 1111 reject_low 19 ALIGNMENT 0 YS2-11a17.q1k vc_4 62 959 126 125 F 898 0.00 1111 reject_low 11 ALIGNMENT 41 YS2-11a17.q1k vc_1 960 920 2472 2512 C 41 100.00 1111 reject_low 17 ALIGNMENT 100 YS2-11a17.q1k vc_4 960 1110 126 277 F 151 90.07 1111 reject_low 11 ALIGNMENT 0 YS2-11a17.q1k vc_2 62 959 2164 2163 F 898 0.00 1111 reject_low 9 ALIGNMENT 26 YS2-11a17.p1k vc_3 996 966 2441 2472 C 31 96.77 1210 reject_low 16 ALIGNMENT 0 YS2-11a17.q1k vc_4 959 62 1535 1534 C 898 0.00 1111 reject_low 14 ALIGNMENT 26 YS2-11a17.p1k vc_1 996 966 2441 2472 C 31 96.77 1210 reject_low 15 ALIGNMENT 157 YS2-11a17.p1k vc_5 1206 966 4792 5025 C 241 90.46 1210 reject_low 1 ALIGNMENT 157 YS2-11a17.p1k vc_7 966 1206 100 333 F 241 90.46 1210 reject_low 2 ALIGNMENT 100 YS2-11a17.q1k vc_4 960 1110 6353 6504 F 151 90.07 1111|1,0 reject_low 13 ALIGNMENT 0 YS2-11a17.q1k vc_4 961 960 5872 6353 F 0 0.00 1111 reject_low 13 ALIGNMENT 0 YS2-11a17.q1k vc_2 919 62 2146 2145 C 858 0.00 1111 reject_low 18 ALIGNMENT 0 YS2-11a17.p1k vc_5 965 77 5026 5025 C 889 0.00 1210 reject_low 1 ALIGNMENT 0 YS2-11a17.p1k vc_3 965 77 2106 2105 C 889 0.00 1210 reject_low 5 ALIGNMENT 0 YS2-11a17.q1k vc_1 62 959 2531 2530 F 898 0.00 1111 reject_low 8 ALIGNMENT 157 YS2-11a17.p1k vc_2 1206 966 1872 2105 C 241 90.46 1210 reject_low 4 ALIGNMENT 0 YS2-11a17.q1k vc_5 921 62 5064 5063 C 860 0.00 1111 reject_low 20 ALIGNMENT 0 YS2-11a17.q1k vc_4 62 919 5831 5830 F 858 0.00 1111 reject_low 13 ALIGNMENT 157 YS2-11a17.p1k vc_4 966 1206 5871 6104 F 241 90.46 1210 reject_low 6 ALIGNMENT 0 YS2-11a17.q1k vc_3 919 62 2513 2512 C 858 0.00 1111 reject_low 19 ALIGNMENT 157 YS2-11a17.p1k vc_1 1206 966 1872 2105 C 241 90.46 1210 reject_low 3 ALIGNMENT 0 YS2-11a17.p1k vc_1 965 77 2473 2472 C 889 0.00 1210 reject_low 15 ALIGNMENT 157 YS2-11a17.p1k vc_3 1206 966 1872 2105 C 241 90.46 1210 reject_low 5 ALIGNMENT 0 YS2-11a17.p1k vc_7 77 965 100 99 F 889 0.00 1210 reject_low 2 ALIGNMENT 100 YS2-11a17.q1k vc_5 960 1110 2398 2549 F 151 90.07 1111 reject_low 1 ALIGNMENT 797 YS2-11a17.q1k chr13 916 38 125382 126260 C 879 97.50 1111 accept 0 ALIGNMENT 0 YS2-11a17.p1k vc_2 965 77 2106 2105 C 889 0.00 1210 reject_low 4 ALIGNMENT 41 YS2-11a17.q1k vc_4 920 960 5831 5871 F 41 100.00 1111 reject_low 13 ALIGNMENT 0 YS2-11a17.p1k vc_4 77 965 5871 5870 F 889 0.00 1210 reject_low 6 ALIGNMENT 0 YS2-11a17.p1k vc_1 965 77 2106 2105 C 889 0.00 1210 reject_low 3 ALIGNMENT 39 YS2-11a17.q1k vc_5 960 922 5025 5063 C 39 100.00 1111 reject_low 20 ALIGNMENT 41 YS2-11a17.q1k vc_2 960 920 2105 2145 C 41 100.00 1111 reject_low 18 ALIGNMENT 0 YS2-11a17.q1k vc_7 959 62 2728 2727 C 898 0.00 1111 reject_low 2 ALIGNMENT 0 YS2-11a17.p1k vc_3 965 77 2473 2472 C 889 0.00 1210 reject_low 16 ALIGNMENT 0 YS2-11a18.p1k vc_3 927 62 2473 2472 C 866 0.00 1209 reject_low 9 ALIGNMENT 186 YS2-11a18.p1k vc_3 1203 928 1825 2105 C 276 90.22 1209 reject_low 3 ALIGNMENT 0 YS2-11a18.p1k vc_2 927 62 2106 2105 C 866 0.00 1209 reject_low 2 ALIGNMENT 0 YS2-11a18.p1k vc_5 927 62 5026 5025 C 866 0.00 1209 reject_low 4 ALIGNMENT 26 YS2-11a18.p1k vc_1 958 928 2441 2472 C 31 96.77 1209 reject_low 8 ALIGNMENT 187 YS2-11a18.p1k vc_4 928 1198 5871 6147 F 271 90.41 1209 reject_low 5 ALIGNMENT 0 YS2-11a18.p1k vc_4 62 927 5871 5870 F 866 0.00 1209 reject_low 5 ALIGNMENT 829 YS2-11a18.p1k chr13 26 910 125378 126261 F 885 98.76 1209 accept 0 ALIGNMENT 187 YS2-11a18.p1k vc_7 928 1198 100 376 F 271 90.41 1209 reject_low 6 ALIGNMENT 0 YS2-11a18.p1k vc_1 927 62 2473 2472 C 866 0.00 1209 reject_low 8 ALIGNMENT 0 YS2-11a18.p1k vc_3 927 62 2106 2105 C 866 0.00 1209 reject_low 3 ALIGNMENT 0 YS2-11a18.p1k vc_1 927 62 2106 2105 C 866 0.00 1209 reject_low 1 ALIGNMENT 187 YS2-11a18.p1k vc_7 928 1198 13562 13838 F 271 90.41 1209 reject_low 7 ALIGNMENT 26 YS2-11a18.p1k vc_3 958 928 2441 2472 C 31 96.77 1209 reject_low 9 ALIGNMENT 803 YS2-11a18.q1k chr13 914 35 125382 126261 C 880 97.84 918 accept 0 ALIGNMENT 0 YS2-11a18.p1k vc_7 62 927 13562 13561 F 866 0.00 1209 reject_low 7 ALIGNMENT 186 YS2-11a18.p1k vc_1 1203 928 1825 2105 C 276 90.22 1209 reject_low 1 ALIGNMENT 0 YS2-11a18.p1k vc_7 62 927 100 99 F 866 0.00 1209 reject_low 6 ALIGNMENT 186 YS2-11a18.p1k vc_5 1203 928 4745 5025 C 276 90.22 1209 reject_low 4 ALIGNMENT 186 YS2-11a18.p1k vc_2 1203 928 1825 2105 C 276 90.22 1209 reject_low 2 ALIGNMENT 0 YS2-11a19.p1k chr03 796 556 84627 84626 C 241 0.00 796 reject_low 45 ALIGNMENT 281 YS2-11a19.p1k chr03 452 777 168602 168929 F 326 97.85 796 reject_low 35 ALIGNMENT 311 YS2-11a19.p1k chr12 455 796 976264 976605 F 342 99.12 796 reject_low 2 ALIGNMENT 288 YS2-11a19.p1k chr04 776 455 1352634 1352955 C 322 98.76 796 reject_low 32 ALIGNMENT 312 YS2-11a19.q1k chr10 29 944 480161 481076 F 916 78.82 1122 reject_low 19 ALIGNMENT 0 YS2-11a19.p1k chr04 777 796 513586 513585 F 20 0.00 796 reject_low 47 ALIGNMENT 0 YS2-11a19.p1k chr04 77 703 513514 513513 F 627 0.00 796 reject_low 47 ALIGNMENT 954 YS2-11a19.q1k chr14 1104 27 564741 565812 C 1078 97.59 1122 reject_low 5 ALIGNMENT 0 YS2-11a19.p1k chr03 796 777 151519 151518 C 20 0.00 796 reject_low 40 ALIGNMENT 306 YS2-11a19.q1k chr07 890 29 564707 565568 C 862 79.23 1122 reject_low 26 ALIGNMENT 70 YS2-11a19.p1k chr07 465 577 817418 817532 F 113 89.38 796 reject_low 43 ALIGNMENT 0 YS2-11a19.p1k chr03 777 796 124462 124461 F 20 0.00 796 reject_low 39 ALIGNMENT 78 YS2-11a19.p1k chr03 743 444 149513 149807 C 300 79.33 796 reject_low 42 ALIGNMENT 0 YS2-11a19.p1k chr04 77 454 513695 513694 F 378 0.00 796 reject_low 6 ALIGNMENT 0 YS2-11a19.p1k chr01 77 451 165834 165833 F 375 0.00 796 reject_low 38 ALIGNMENT 0 YS2-11a19.p1k chr03 777 796 143077 143076 F 20 0.00 796 reject_low 44 ALIGNMENT 0 YS2-11a19.p1k chr03 77 308 149563 149562 F 232 0.00 796 reject_low 14 ALIGNMENT 0 YS2-11a19.p1k chr05 777 796 135939 135938 F 20 0.00 796 reject_low 33 ALIGNMENT 0 YS2-11a19.p1k chr15 454 77 976231 976230 C 378 0.00 796 reject_low 4 ALIGNMENT 28 YS2-11a19.p1k chr04 704 776 513514 513586 F 73 82.19 796 reject_low 47 ALIGNMENT 308 YS2-11a19.p1k chr15 796 455 975889 976230 C 342 98.83 796 reject_low 4 ALIGNMENT 0 YS2-11a19.p1k chr04 596 796 987296 987295 F 201 0.00 796 reject_low 41 ALIGNMENT 106 YS2-11a19.p1k chr04 465 595 987164 987296 F 131 96.18 796 reject_low 41 ALIGNMENT 108 YS2-11a19.p1k chr03 452 776 124138 124462 F 325 81.23 796 reject_low 39 ALIGNMENT 305 YS2-11a19.p1k chr04 455 796 513695 514036 F 342 98.54 796 reject_low 6 ALIGNMENT 299 YS2-11a19.p1k chr03 796 442 90417 90771 C 355 96.90 796 reject_low 3 ALIGNMENT 0 YS2-11a19.p1k chr04 454 77 1352956 1352955 C 378 0.00 796 reject_low 32 ALIGNMENT 959 YS2-11a19.q1k chr07 1104 27 571452 572524 C 1078 97.77 1122 reject_low 1 ALIGNMENT 0 YS2-11a19.p1k chr07 578 796 817532 817531 F 219 0.00 796 reject_low 43 ALIGNMENT 0 YS2-11a19.p1k chr14 77 437 726607 726606 F 361 0.00 796 reject_low 15 ALIGNMENT 0 YS2-11a19.p1k chr03 77 451 124138 124137 F 375 0.00 796 reject_low 39 ALIGNMENT 0 YS2-11a19.p1k chr03 441 77 90772 90771 C 365 0.00 796 reject_low 3 ALIGNMENT 59 YS2-11a19.p1k chr03 501 776 142803 143077 F 276 77.17 796 reject_low 44 ALIGNMENT 309 YS2-11a19.q1k chr16 890 29 807501 808362 C 862 79.35 1122 reject_low 23 ALIGNMENT 0 YS2-11a19.p1k chr04 796 777 1352635 1352634 C 20 0.00 796 reject_low 32 ALIGNMENT 924 YS2-11a19.q1k chr12 27 1104 943369 944440 F 1078 96.66 1122 reject_low 8 ALIGNMENT 0 YS2-11a19.p1k chr03 454 77 151839 151838 C 378 0.00 796 reject_low 40 ALIGNMENT 295 YS2-11a19.p1k chr07 796 468 817059 817387 C 329 98.78 796 reject_low 7 ALIGNMENT 303 YS2-11a19.q1k chr12 959 29 478770 479699 C 931 78.41 1122 reject_low 25 ALIGNMENT 945 YS2-11a19.q1k chr04 27 1104 873996 875067 F 1078 97.31 1122 reject_low 11 ALIGNMENT 0 YS2-11a19.p1k chr03 77 451 168602 168601 F 375 0.00 796 reject_low 35 ALIGNMENT 0 YS2-11a19.p1k chr03 445 796 149695 149694 F 352 0.00 796 reject_low 14 ALIGNMENT 312 YS2-11a19.q1k chr02 29 962 223236 224168 F 934 78.69 1122 reject_low 17 ALIGNMENT 308 YS2-11a19.p1k chr04 796 455 986772 987113 C 342 98.83 796 reject_low 9 ALIGNMENT 0 YS2-11a19.p1k chr01 77 451 160246 160245 F 375 0.00 796 reject_low 37 ALIGNMENT 930 YS2-11a19.q1k chr03 27 1104 86990 88061 F 1078 96.85 1122 reject_low 3 ALIGNMENT 0 YS2-11a19.p1k chr08 777 796 389512 389511 F 20 0.00 796 reject_low 28 ALIGNMENT 0 YS2-11a19.p1k chr04 796 777 981166 981165 C 20 0.00 796 reject_low 31 ALIGNMENT 0 YS2-11a19.p1k chr07 445 796 701242 701241 F 352 0.00 796 accept 0 ALIGNMENT 312 YS2-11a19.q1k chr13 29 962 186364 187296 F 934 78.69 1122 reject_low 18 ALIGNMENT 0 YS2-11a19.p1k chr03 465 77 84718 84717 C 389 0.00 796 reject_low 45 ALIGNMENT 306 YS2-11a19.p1k chr14 438 777 726607 726947 F 340 99.12 796 reject_low 15 ALIGNMENT 288 YS2-11a19.p1k chr04 776 455 981165 981486 C 322 98.76 796 reject_low 31 ALIGNMENT 0 YS2-11a19.p1k chr07 467 77 817388 817387 C 391 0.00 796 reject_low 7 ALIGNMENT 915 YS2-11a19.q1k chr02 27 1104 31821 32892 F 1078 96.38 1122 reject_low 13 ALIGNMENT 288 YS2-11a19.p1k chr15 776 455 970282 970603 C 322 98.76 796 reject_low 34 ALIGNMENT 0 YS2-11a19.p1k chr04 796 737 1352963 1352962 C 60 0.00 796 reject_low 49 ALIGNMENT 290 YS2-11a19.p1k chr04 465 796 645517 645850 F 332 98.19 796 reject_low 29 ALIGNMENT 0 YS2-11a19.p1k chr04 77 464 987164 987163 F 388 0.00 796 reject_low 41 ALIGNMENT 312 YS2-11a19.q1k chr13 29 944 198531 199446 F 916 78.82 1122 reject_low 20 ALIGNMENT 0 YS2-11a19.p1k chr03 796 777 84811 84810 C 20 0.00 796 reject_low 36 ALIGNMENT 0 YS2-11a19.p1k chr03 778 796 168929 168928 F 19 0.00 796 reject_low 35 ALIGNMENT 0 YS2-11a19.p1k chr09 796 777 246218 246217 C 20 0.00 796 reject_low 30 ALIGNMENT 0 YS2-11a19.p1k chr12 77 454 976264 976263 F 378 0.00 796 reject_low 2 ALIGNMENT 936 YS2-11a19.q1k chr06 27 1104 140088 141159 F 1078 97.03 1122 reject_low 12 ALIGNMENT 44 YS2-11a19.p1k chr03 555 466 84626 84717 C 90 85.56 796 reject_low 45 ALIGNMENT 915 YS2-11a19.q1k chr04 27 1104 983345 984416 F 1078 96.38 1122 reject_low 9 ALIGNMENT 942 YS2-11a19.q1k chr15 27 1104 972462 973533 F 1078 97.22 1122 reject_low 4 ALIGNMENT 0 YS2-11a19.p1k chr05 77 454 135618 135617 F 378 0.00 796 reject_low 33 ALIGNMENT 936 YS2-11a19.q1k chr07 27 1104 813632 814703 F 1078 97.03 1122 reject_low 7 ALIGNMENT 0 YS2-11a19.p1k chr15 77 449 976258 976257 F 373 0.00 796 reject_low 48 ALIGNMENT 0 YS2-11a19.p1k chr04 77 464 645517 645516 F 388 0.00 796 reject_low 29 ALIGNMENT 27 YS2-11a19.p1k chr04 736 618 1352962 1353079 C 119 78.15 796 reject_low 49 ALIGNMENT 291 YS2-11a19.p1k chr08 441 776 389176 389512 F 336 97.92 796 reject_low 28 ALIGNMENT 288 YS2-11a19.p1k chr05 455 776 135618 135939 F 322 98.76 796 reject_low 33 ALIGNMENT 0 YS2-11a19.p1k chr15 532 796 976337 976336 F 265 0.00 796 reject_low 48 ALIGNMENT 0 YS2-11a19.p1k chr12 454 77 947138 947137 C 378 0.00 796 reject_low 8 ALIGNMENT 276 YS2-11a19.p1k chr03 776 455 84810 85131 C 322 97.52 796 reject_low 36 ALIGNMENT 304 YS2-11a19.q1k chr16 29 962 846608 847543 F 934 78.59 1122 reject_low 24 ALIGNMENT 0 YS2-11a19.p1k chr03 454 77 85132 85131 C 378 0.00 796 reject_low 36 ALIGNMENT 315 YS2-11a19.q1k chr10 29 962 474577 475509 F 934 78.80 1122 reject_low 16 ALIGNMENT 103 YS2-11a19.p1k chr03 776 455 151518 151838 C 322 81.06 796 reject_low 40 ALIGNMENT 0 YS2-11a19.p1k chr03 443 77 149808 149807 C 367 0.00 796 reject_low 42 ALIGNMENT 0 YS2-11a19.p1k chr07 77 454 568755 568754 F 378 0.00 796 reject_low 1 ALIGNMENT 347 YS2-11a19.p1k chr07 62 444 700859 701242 F 383 98.17 796 accept 0 ALIGNMENT 299 YS2-11a19.p1k chr12 796 455 946796 947137 C 342 97.95 796 reject_low 8 ALIGNMENT 0 YS2-11a19.p1k chr07 77 464 817418 817417 F 388 0.00 796 reject_low 43 ALIGNMENT 293 YS2-11a19.p1k chr14 455 796 562044 562385 F 342 97.37 796 reject_low 5 ALIGNMENT 0 YS2-11a19.p1k chr04 454 77 981487 981486 C 378 0.00 796 reject_low 31 ALIGNMENT 0 YS2-11a19.p1k chr04 454 77 987114 987113 C 378 0.00 796 reject_low 9 ALIGNMENT 0 YS2-11a19.p1k chr15 796 777 970283 970282 C 20 0.00 796 reject_low 34 ALIGNMENT 285 YS2-11a19.p1k chr09 776 445 246217 246549 C 332 97.59 796 reject_low 30 ALIGNMENT 0 YS2-11a19.p1k chr09 444 77 246550 246549 C 368 0.00 796 reject_low 30 ALIGNMENT 0 YS2-11a19.p1k chr07 796 687 701115 701114 C 110 0.00 796 reject_low 46 ALIGNMENT 948 YS2-11a19.q1k chr15 1104 27 706772 707843 C 1078 97.40 1122 reject_low 10 ALIGNMENT 306 YS2-11a19.q1k chr15 29 959 597015 597944 F 931 78.52 1122 reject_low 22 ALIGNMENT 939 YS2-11a19.q1k chr04 1104 27 516392 517463 C 1078 97.12 1122 reject_low 6 ALIGNMENT 36 YS2-11a19.p1k chr03 309 444 149563 149695 F 136 80.88 796 reject_low 14 ALIGNMENT 300 YS2-11a19.q1k chr16 962 29 853418 854350 C 934 78.27 1122 reject_low 27 ALIGNMENT 0 YS2-11a19.p1k chr03 77 500 142803 142802 F 424 0.00 796 reject_low 44 ALIGNMENT 309 YS2-11a19.q1k chr12 944 29 217891 218806 C 916 78.71 1122 reject_low 21 ALIGNMENT 27 YS2-11a19.p1k chr15 450 531 976258 976337 F 82 84.15 796 reject_low 48 ALIGNMENT 0 YS2-11a19.p1k chr01 777 796 166163 166162 F 20 0.00 796 reject_low 38 ALIGNMENT 0 YS2-11a19.p1k chr07 465 77 701336 701335 C 389 0.00 796 reject_low 46 ALIGNMENT 0 YS2-11a19.p1k chr04 617 77 1353080 1353079 C 541 0.00 796 reject_low 49 ALIGNMENT 0 YS2-11a19.p1k chr14 77 454 562044 562043 F 378 0.00 796 reject_low 5 ALIGNMENT 235 YS2-11a19.p1k chr01 452 796 160246 160595 F 345 91.88 796 reject_low 37 ALIGNMENT 311 YS2-11a19.p1k chr07 455 796 568755 569096 F 342 99.12 796 reject_low 1 ALIGNMENT 954 YS2-11a19.q1k chr12 1104 27 978445 979516 C 1078 97.59 1122 reject_low 2 ALIGNMENT 0 YS2-11a19.p1k chr14 778 796 726947 726946 F 19 0.00 796 reject_low 15 ALIGNMENT 216 YS2-11a19.p1k chr01 452 776 165834 166163 F 325 91.38 796 reject_low 38 ALIGNMENT 0 YS2-11a19.p1k chr15 454 77 970604 970603 C 378 0.00 796 reject_low 34 ALIGNMENT 0 YS2-11a19.p1k chr08 77 440 389176 389175 F 364 0.00 796 reject_low 28 ALIGNMENT 31 YS2-11a19.p1k chr07 686 466 701114 701335 C 221 75.57 796 reject_low 46 ALIGNMENT 0 YS2-11a19.p1k chr03 796 744 149514 149513 C 53 0.00 796 reject_low 42 ALIGNMENT 0 YS2-11a20.q1k vc_7 62 318 13525 13524 F 257 0.00 356 reject_low 8 ALIGNMENT 0 YS2-11a20.q1k vc_3 315 62 2513 2512 C 254 0.00 356 reject_low 4 ALIGNMENT 41 YS2-11a20.q1k vc_1 356 316 2472 2512 C 41 100.00 356 reject_low 2 ALIGNMENT 39 YS2-11a20.q1k vc_5 356 318 5025 5063 C 39 100.00 356 reject_low 6 ALIGNMENT 38 YS2-11a20.q1k vc_7 319 356 63 100 F 38 100.00 356 reject_low 7 ALIGNMENT 36 YS2-11a20.q1k vc_5 353 318 1 36 C 36 100.00 356 reject_low 9 ALIGNMENT 0 YS2-11a20.q1k vc_2 315 62 2146 2145 C 254 0.00 356 reject_low 3 ALIGNMENT 0 YS2-11a20.q1k vc_5 317 62 37 36 C 256 0.00 356 reject_low 9 ALIGNMENT 41 YS2-11a20.q1k vc_2 356 316 2105 2145 C 41 100.00 356 reject_low 3 ALIGNMENT 0 YS2-11a20.q1k vc_5 317 62 5064 5063 C 256 0.00 356 reject_low 6 ALIGNMENT 280 YS2-11a20.q1k chr02 315 35 37631 37911 C 281 100.00 356 accept_chi 1 ALIGNMENT 280 YS2-11a20.p1k chr02 27 307 37631 37911 F 281 100.00 325 accept_chi 0 ALIGNMENT 41 YS2-11a20.q1k vc_3 356 316 2472 2512 C 41 100.00 356 reject_low 4 ALIGNMENT 0 YS2-11a20.q1k vc_1 315 62 2513 2512 C 254 0.00 356 reject_low 2 ALIGNMENT 38 YS2-11a20.q1k vc_7 319 356 13525 13562 F 38 100.00 356 reject_low 8 ALIGNMENT 41 YS2-11a20.q1k vc_4 316 356 5831 5871 F 41 100.00 356 reject_low 5 ALIGNMENT 0 YS2-11a20.q1k chr02 356 316 37632 37631 C 41 0.00 356 accept_chi 1 ALIGNMENT 0 YS2-11a20.q1k vc_4 62 315 5831 5830 F 254 0.00 356 reject_low 5 ALIGNMENT 0 YS2-11a20.p1k chr02 308 325 37911 37910 F 18 0.00 325 accept_chi 0 ALIGNMENT 0 YS2-11a20.q1k vc_7 62 318 63 62 F 257 0.00 356 reject_low 7 ALIGNMENT 42 YS2-11a21.q1k vc_4 247 288 5830 5871 F 42 100.00 288 reject_vc 2 ALIGNMENT 42 YS2-11a21.q1k vc_1 288 247 2472 2513 C 42 100.00 288 reject_vc 0 ALIGNMENT 0 YS2-11a21.q1k vc_5 249 98 5064 5063 C 152 0.00 288 reject_vc 3 ALIGNMENT 0 YS2-11a21.q1k vc_3 246 98 2514 2513 C 149 0.00 288 reject_vc 1 ALIGNMENT 38 YS2-11a21.q1k vc_7 251 288 13525 13562 F 38 100.00 288 reject_vc 4 ALIGNMENT 42 YS2-11a21.q1k vc_3 288 247 2472 2513 C 42 100.00 288 reject_vc 1 ALIGNMENT 36 YS2-11a21.q1k vc_5 285 250 1 36 C 36 100.00 288 reject_vc 5 ALIGNMENT 0 YS2-11a21.q1k vc_1 246 98 2514 2513 C 149 0.00 288 reject_vc 0 ALIGNMENT 0 YS2-11a21.q1k vc_7 98 250 13525 13524 F 153 0.00 288 reject_vc 4 ALIGNMENT 39 YS2-11a21.q1k vc_5 288 250 5025 5063 C 39 100.00 288 reject_vc 3 ALIGNMENT 0 YS2-11a21.q1k vc_5 249 98 37 36 C 152 0.00 288 reject_vc 5 ALIGNMENT 0 YS2-11a21.q1k vc_4 98 246 5830 5829 F 149 0.00 288 reject_vc 2 ALIGNMENT 941 YS2-11a23.q1k chr02 1003 30 477839 478814 C 974 98.97 1003 manual 1 ALIGNMENT 947 YS2-11a23.q1k chr16 1003 30 700766 701741 C 974 99.18 1003 manual 0 ALIGNMENT 1019 YS2-11a24.p1k chr15 1177 56 613357 614474 C 1122 97.77 1190 accept 0 ALIGNMENT 951 YS2-11b01.p1k chr13 29 1094 885153 886231 F 1066 97.75 1175 accept 0 ALIGNMENT 0 YS2-11b01.q1k chr13 337 62 888918 888917 C 276 0.00 1131 accept 0 ALIGNMENT 290 YS2-11b01.q1k chr09 34 340 356946 357252 F 307 99.67 1131 reject_low 1 ALIGNMENT 0 YS2-11b01.q1k chr09 341 849 357252 357251 F 509 0.00 1131 reject_low 1 ALIGNMENT 736 YS2-11b01.q1k chr13 1131 338 888117 888917 C 794 98.49 1131 accept 0 ALIGNMENT 915 YS2-11b03.q1k chr12 35 991 452607 453559 F 957 98.85 991 accept 0 ALIGNMENT 915 YS2-11b03.q1k chr12 35 991 461744 462696 F 957 98.85 991 accept 1 ALIGNMENT 1022 YS2-11b03.p1k chr12 1139 31 456621 457740 C 1109 97.84 1200 accept 0 ALIGNMENT 1022 YS2-11b03.p1k chr12 1139 31 465758 466877 C 1109 97.84 1200 accept 1 ALIGNMENT 0 YS2-11b04.p1k chr12 569 551 1077618 1077617 C 19 0.00 569 ambiguous_tel 0 ALIGNMENT 440 YS2-11b04.q1k chr10 553 35 223 741 C 519 96.53 556 ambiguous_tel 8 ALIGNMENT 0 YS2-11b04.p1k chr04 569 551 1531417 1531416 C 19 0.00 569 reject_low 24 ALIGNMENT 0 YS2-11b04.p1k chr12 551 569 755 754 F 19 0.00 569 ambiguous_tel 10 ALIGNMENT 462 YS2-11b04.q1k chr15 35 556 1090581 1091107 F 522 97.70 556 reject_low 12 ALIGNMENT 427 YS2-11b04.p1k chr12 27 550 233 755 F 524 95.99 569 ambiguous_tel 10 ALIGNMENT 438 YS2-11b04.q1k chr02 556 35 32 558 C 522 96.17 556 ambiguous_tel 9 ALIGNMENT 0 YS2-11b04.p1k chr09 551 569 758 757 F 19 0.00 569 ambiguous_tel 7 ALIGNMENT 0 YS2-11b04.p1k chr05 569 551 576246 576245 C 19 0.00 569 reject_low 21 ALIGNMENT 443 YS2-11b04.q1k chr16 35 556 947422 947945 F 522 96.74 556 reject_low 16 ALIGNMENT 459 YS2-11b04.q1k chr13 556 35 213 739 C 522 97.51 556 ambiguous_tel 2 ALIGNMENT 0 YS2-11b04.p1k chr07 569 551 1090323 1090322 C 19 0.00 569 reject_low 22 ALIGNMENT 0 YS2-11b04.p1k chr14 551 569 646 645 F 19 0.00 569 ambiguous_tel 5 ALIGNMENT 0 YS2-11b04.p1k chr15 569 551 1090582 1090581 C 19 0.00 569 reject_low 19 ALIGNMENT 464 YS2-11b04.p1k chr12 550 27 1077617 1078145 C 524 97.71 569 ambiguous_tel 0 ALIGNMENT 456 YS2-11b04.q1k chr08 556 35 197 723 C 522 97.32 556 ambiguous_tel 3 ALIGNMENT 452 YS2-11b04.p1k chr05 27 550 14 542 F 524 96.95 569 ambiguous_tel 4 ALIGNMENT 443 YS2-11b04.q1k chr14 556 35 123 646 C 522 96.74 556 ambiguous_tel 5 ALIGNMENT 0 YS2-11b04.p1k chr02 551 569 558 557 F 19 0.00 569 ambiguous_tel 9 ALIGNMENT 0 YS2-11b04.p1k chr08 569 551 561770 561769 C 19 0.00 569 reject_low 20 ALIGNMENT 459 YS2-11b04.q1k chr08 35 556 561769 562295 F 522 97.51 556 reject_low 13 ALIGNMENT 440 YS2-11b04.p1k chr02 27 550 30 558 F 524 96.18 569 ambiguous_tel 9 ALIGNMENT 425 YS2-11b04.q1k chr12 556 35 235 755 C 522 95.98 556 ambiguous_tel 10 ALIGNMENT 0 YS2-11b04.p1k chr16 551 569 555 554 F 19 0.00 569 ambiguous_tel 6 ALIGNMENT 445 YS2-11b04.p1k chr04 550 57 1531416 1531914 C 494 98.38 569 reject_low 24 ALIGNMENT 462 YS2-11b04.q1k chr12 35 556 1077617 1078143 F 522 97.70 556 reject_low 11 ALIGNMENT 462 YS2-11b04.q1k chr12 35 556 1070954 1071480 F 522 97.70 556 ambiguous_tel 0 ALIGNMENT 0 YS2-11b04.p1k chr16 569 551 947423 947422 C 19 0.00 569 reject_low 23 ALIGNMENT 445 YS2-11b04.p1k chr14 27 550 121 646 F 524 96.76 569 ambiguous_tel 5 ALIGNMENT 464 YS2-11b04.p1k chr15 550 27 1090581 1091109 C 524 97.71 569 reject_low 19 ALIGNMENT 445 YS2-11b04.q1k chr04 35 528 1531416 1531914 F 494 98.38 556 reject_low 17 ALIGNMENT 0 YS2-11b04.q1k chr04 529 556 1531914 1531913 F 28 0.00 556 reject_low 17 ALIGNMENT 461 YS2-11b04.p1k chr08 550 27 561769 562297 C 524 97.52 569 reject_low 20 ALIGNMENT 442 YS2-11b04.p1k chr09 27 550 235 758 F 524 96.37 569 ambiguous_tel 7 ALIGNMENT 443 YS2-11b04.q1k chr07 35 556 1090322 1090845 F 522 96.74 556 reject_low 15 ALIGNMENT 464 YS2-11b04.p1k chr12 550 27 1070954 1071482 C 524 97.71 569 reject_low 18 ALIGNMENT 443 YS2-11b04.q1k chr16 556 35 32 555 C 522 96.74 556 ambiguous_tel 6 ALIGNMENT 0 YS2-11b04.p1k chr12 551 569 6398 6397 F 19 0.00 569 ambiguous_tel 1 ALIGNMENT 0 YS2-11b04.p1k chr08 551 569 723 722 F 19 0.00 569 ambiguous_tel 3 ALIGNMENT 459 YS2-11b04.q1k chr12 556 35 5872 6398 C 522 97.51 556 ambiguous_tel 1 ALIGNMENT 0 YS2-11b04.p1k chr05 551 569 542 541 F 19 0.00 569 ambiguous_tel 4 ALIGNMENT 444 YS2-11b04.p1k chr05 550 27 576245 576770 C 524 96.76 569 reject_low 21 ALIGNMENT 444 YS2-11b04.p1k chr16 550 27 947422 947947 C 524 96.76 569 reject_low 23 ALIGNMENT 440 YS2-11b04.q1k chr09 553 35 240 758 C 519 96.53 556 ambiguous_tel 7 ALIGNMENT 442 YS2-11b04.p1k chr10 27 550 218 741 F 524 96.37 569 ambiguous_tel 8 ALIGNMENT 445 YS2-11b04.p1k chr16 27 550 30 555 F 524 96.76 569 ambiguous_tel 6 ALIGNMENT 461 YS2-11b04.p1k chr12 27 550 5870 6398 F 524 97.52 569 ambiguous_tel 1 ALIGNMENT 450 YS2-11b04.q1k chr05 556 35 16 542 C 522 96.93 556 ambiguous_tel 4 ALIGNMENT 458 YS2-11b04.p1k chr08 27 550 195 723 F 524 97.33 569 ambiguous_tel 3 ALIGNMENT 0 YS2-11b04.p1k chr13 551 569 739 738 F 19 0.00 569 ambiguous_tel 2 ALIGNMENT 0 YS2-11b04.p1k chr10 551 569 741 740 F 19 0.00 569 ambiguous_tel 8 ALIGNMENT 443 YS2-11b04.q1k chr05 35 556 576245 576768 F 522 96.74 556 reject_low 14 ALIGNMENT 0 YS2-11b04.p1k chr12 569 551 1070955 1070954 C 19 0.00 569 reject_low 18 ALIGNMENT 461 YS2-11b04.p1k chr13 27 550 211 739 F 524 97.52 569 ambiguous_tel 2 ALIGNMENT 444 YS2-11b04.p1k chr07 550 27 1090322 1090847 C 524 96.76 569 reject_low 22 ALIGNMENT 38 YS2-11b05.q1k vc_7 187 224 13525 13562 F 38 100.00 224 reject_low 20 ALIGNMENT 148 YS2-11b05.q1k chr07 36 184 1088240 1088388 F 149 100.00 224 ambiguous_tel 4 ALIGNMENT 0 YS2-11b05.q1k chr12 224 185 2798 2797 C 40 0.00 224 ambiguous_tel 6 ALIGNMENT 0 YS2-11b05.q1k chr07 185 224 1088388 1088387 F 40 0.00 224 ambiguous_tel 4 ALIGNMENT 148 YS2-11b05.q1k chr12 36 184 1075535 1075683 F 149 100.00 224 ambiguous_tel 9 ALIGNMENT 0 YS2-11b05.q1k vc_1 183 62 2513 2512 C 122 0.00 224 reject_low 19 ALIGNMENT 148 YS2-11b05.q1k chr16 184 36 2489 2637 C 149 100.00 224 ambiguous_tel 13 ALIGNMENT 41 YS2-11b05.q1k vc_1 224 184 2472 2512 C 41 100.00 224 reject_low 19 ALIGNMENT 142 YS2-11b05.q1k chr09 184 36 2968 3116 C 149 98.66 224 ambiguous_tel 17 ALIGNMENT 148 YS2-11b05.q1k chr04 36 184 1529334 1529482 F 149 100.00 224 ambiguous_tel 1 ALIGNMENT 148 YS2-11b05.q1k chr06 184 36 1834 1982 C 149 100.00 224 ambiguous_tel 3 ALIGNMENT 0 YS2-11b05.q1k chr06 224 185 1835 1834 C 40 0.00 224 ambiguous_tel 3 ALIGNMENT 0 YS2-11b05.q1k chr08 185 224 559833 559832 F 40 0.00 224 ambiguous_tel 5 ALIGNMENT 148 YS2-11b05.q1k chr05 36 184 574163 574311 F 149 100.00 224 ambiguous_tel 2 ALIGNMENT 0 YS2-11b05.q1k chr16 224 185 2490 2489 C 40 0.00 224 ambiguous_tel 13 ALIGNMENT 0 YS2-11b05.q1k chr12 185 224 1075683 1075682 F 40 0.00 224 ambiguous_tel 9 ALIGNMENT 142 YS2-11b05.q1k chr08 184 36 2529 2677 C 149 98.66 224 ambiguous_tel 16 ALIGNMENT 148 YS2-11b05.q1k chr02 184 36 2998 3146 C 149 100.00 224 ambiguous_tel 0 ALIGNMENT 142 YS2-11b05.q1k chr05 184 36 2644 2792 C 149 98.66 224 ambiguous_tel 15 ALIGNMENT 0 YS2-11b05.q1k chr04 185 224 1529482 1529481 F 40 0.00 224 ambiguous_tel 1 ALIGNMENT 148 YS2-11b05.q1k chr12 184 36 2797 2945 C 149 100.00 224 ambiguous_tel 6 ALIGNMENT 0 YS2-11b05.q1k chr12 224 185 8333 8332 C 40 0.00 224 ambiguous_tel 7 ALIGNMENT 148 YS2-11b05.q1k chr14 184 36 2580 2728 C 149 100.00 224 ambiguous_tel 11 ALIGNMENT 142 YS2-11b05.q1k chr10 184 36 2951 3099 C 149 98.66 224 ambiguous_tel 18 ALIGNMENT 0 YS2-11b05.q1k chr13 224 185 2674 2673 C 40 0.00 224 ambiguous_tel 10 ALIGNMENT 148 YS2-11b05.q1k chr12 184 36 8332 8480 C 149 100.00 224 ambiguous_tel 7 ALIGNMENT 0 YS2-11b05.q1k chr05 224 185 2645 2644 C 40 0.00 224 ambiguous_tel 15 ALIGNMENT 148 YS2-11b05.q1k chr16 36 184 945232 945380 F 149 100.00 224 ambiguous_tel 14 ALIGNMENT 0 YS2-11b05.q1k chr10 224 185 2952 2951 C 40 0.00 224 ambiguous_tel 18 ALIGNMENT 0 YS2-11b05.q1k chr08 224 185 2530 2529 C 40 0.00 224 ambiguous_tel 16 ALIGNMENT 0 YS2-11b05.q1k chr05 185 224 574311 574310 F 40 0.00 224 ambiguous_tel 2 ALIGNMENT 0 YS2-11b05.q1k chr16 185 224 945380 945379 F 40 0.00 224 ambiguous_tel 14 ALIGNMENT 0 YS2-11b05.q1k chr12 185 224 1069020 1069019 F 40 0.00 224 ambiguous_tel 8 ALIGNMENT 148 YS2-11b05.q1k chr12 36 184 1068872 1069020 F 149 100.00 224 ambiguous_tel 8 ALIGNMENT 0 YS2-11b05.q1k chr09 224 185 2969 2968 C 40 0.00 224 ambiguous_tel 17 ALIGNMENT 148 YS2-11b05.q1k chr13 184 36 2673 2821 C 149 100.00 224 ambiguous_tel 10 ALIGNMENT 0 YS2-11b05.q1k chr14 224 185 2581 2580 C 40 0.00 224 ambiguous_tel 11 ALIGNMENT 0 YS2-11b05.q1k chr15 185 224 1088647 1088646 F 40 0.00 224 ambiguous_tel 12 ALIGNMENT 0 YS2-11b05.q1k chr02 224 185 2999 2998 C 40 0.00 224 ambiguous_tel 0 ALIGNMENT 148 YS2-11b05.q1k chr15 36 184 1088499 1088647 F 149 100.00 224 ambiguous_tel 12 ALIGNMENT 148 YS2-11b05.q1k chr08 36 184 559685 559833 F 149 100.00 224 ambiguous_tel 5 ALIGNMENT 0 YS2-11b05.q1k vc_7 62 186 13525 13524 F 125 0.00 224 reject_low 20 ALIGNMENT 948 YS2-11b07.q1k chr04 37 1161 1347536 1348664 F 1125 95.73 1177 accept 0 ALIGNMENT 988 YS2-11b07.p1k chr04 1185 29 1350976 1352138 C 1157 95.68 1208 accept 0 ALIGNMENT 1013 YS2-11b08.p1k chr16 1217 29 205446 206647 C 1189 96.13 1225 accept 0 ALIGNMENT 972 YS2-11b08.q1k chr16 32 1151 201929 203060 F 1120 96.96 1169 accept 0 ALIGNMENT 962 YS2-11b09.p1k chr12 1121 30 464704 465779 C 1092 97.07 1257 accept 1 ALIGNMENT 1015 YS2-11b09.q1k chr12 39 1160 451891 453022 F 1122 97.15 1168 accept 0 ALIGNMENT 0 YS2-11b09.q1k chr12 724 850 490543 490542 F 127 0.00 1168 reject_low 2 ALIGNMENT 1015 YS2-11b09.q1k chr12 39 1160 461028 462159 F 1122 97.15 1168 accept 1 ALIGNMENT 662 YS2-11b09.q1k chr12 39 723 489859 490543 F 685 98.98 1168 reject_low 2 ALIGNMENT 962 YS2-11b09.p1k chr12 1121 30 455567 456642 C 1092 97.07 1257 accept 0 ALIGNMENT 941 YS2-11b11.q1k chr04 44 1078 282038 283069 F 1035 98.07 1108 accept_chi 1 ALIGNMENT 960 YS2-11b11.p1k chr04 1065 28 282031 283073 C 1038 98.07 1225 accept_chi 0 ALIGNMENT 997 YS2-11b12.p1k chr16 1167 30 207287 208433 C 1138 96.57 1220 accept 0 ALIGNMENT 896 YS2-11b12.q1k chr16 39 1106 204131 205203 F 1068 95.79 1110 accept 0 ALIGNMENT 964 YS2-11b13.q1k chr06 38 1129 122362 123458 F 1092 96.34 1134 accept 0 ALIGNMENT 990 YS2-11b13.p1k chr06 1194 30 126365 127543 C 1165 96.31 1204 accept 0 ALIGNMENT 966 YS2-11b14.q1k chr12 1119 34 56497 57583 C 1086 97.42 1119 accept 0 ALIGNMENT 1035 YS2-11b14.p1k chr12 29 1207 52599 53778 F 1179 96.95 1210 accept 0 ALIGNMENT 0 YS2-11b15.q1k vc_1 360 62 2513 2512 C 299 0.00 401 reject_low 2 ALIGNMENT 305 YS2-11b15.p1k chr10 50 372 191477 191802 F 323 98.76 390 accept_chi 1 ALIGNMENT 41 YS2-11b15.q1k vc_1 401 361 2472 2512 C 41 100.00 401 reject_low 2 ALIGNMENT 0 YS2-11b15.q1k vc_5 362 62 37 36 C 301 0.00 401 reject_low 7 ALIGNMENT 39 YS2-11b15.q1k vc_5 401 363 5025 5063 C 39 100.00 401 reject_low 5 ALIGNMENT 38 YS2-11b15.q1k vc_7 364 401 13525 13562 F 38 100.00 401 reject_low 6 ALIGNMENT 0 YS2-11b15.p1k chr10 373 390 191802 191801 F 18 0.00 390 accept_chi 1 ALIGNMENT 41 YS2-11b15.q1k vc_3 401 361 2472 2512 C 41 100.00 401 reject_low 3 ALIGNMENT 0 YS2-11b15.q1k vc_3 360 62 2513 2512 C 299 0.00 401 reject_low 3 ALIGNMENT 41 YS2-11b15.q1k vc_4 361 401 5831 5871 F 41 100.00 401 reject_low 4 ALIGNMENT 0 YS2-11b15.q1k vc_7 62 363 13525 13524 F 302 0.00 401 reject_low 6 ALIGNMENT 36 YS2-11b15.q1k vc_5 398 363 1 36 C 36 100.00 401 reject_low 7 ALIGNMENT 322 YS2-11b15.q1k chr10 360 26 191469 191804 C 335 99.10 401 accept_chi 0 ALIGNMENT 0 YS2-11b15.q1k chr10 401 361 191470 191469 C 41 0.00 401 accept_chi 0 ALIGNMENT 0 YS2-11b15.q1k vc_4 62 360 5831 5830 F 299 0.00 401 reject_low 4 ALIGNMENT 0 YS2-11b15.q1k vc_5 362 62 5064 5063 C 301 0.00 401 reject_low 5 ALIGNMENT 0 YS2-11b16.p1k chr04 500 482 1322541 1322540 C 19 0.00 500 accept_chi 0 ALIGNMENT 40 YS2-11b16.q1k vc_3 498 459 2472 2511 C 40 100.00 498 reject_low 4 ALIGNMENT 40 YS2-11b16.q1k vc_1 498 459 2472 2511 C 40 100.00 498 reject_low 2 ALIGNMENT 0 YS2-11b16.q1k chr04 459 498 1322960 1322959 F 40 0.00 498 accept_chi 1 ALIGNMENT 40 YS2-11b16.q1k vc_4 459 498 5832 5871 F 40 100.00 498 reject_low 5 ALIGNMENT 39 YS2-11b16.q1k vc_5 498 460 5025 5063 C 39 100.00 498 reject_low 6 ALIGNMENT 0 YS2-11b16.q1k vc_7 62 460 13525 13524 F 399 0.00 498 reject_low 7 ALIGNMENT 38 YS2-11b16.q1k vc_7 461 498 13525 13562 F 38 100.00 498 reject_low 7 ALIGNMENT 40 YS2-11b16.q1k vc_2 498 459 2105 2144 C 40 100.00 498 reject_low 3 ALIGNMENT 0 YS2-11b16.q1k vc_5 459 62 5064 5063 C 398 0.00 498 reject_low 6 ALIGNMENT 401 YS2-11b16.p1k chr04 481 61 1322540 1322960 C 421 100.00 500 accept_chi 0 ALIGNMENT 36 YS2-11b16.q1k vc_5 495 460 1 36 C 36 100.00 498 reject_low 8 ALIGNMENT 401 YS2-11b16.q1k chr04 38 458 1322540 1322960 F 421 100.00 498 accept_chi 1 ALIGNMENT 0 YS2-11b16.q1k vc_2 458 62 2145 2144 C 397 0.00 498 reject_low 3 ALIGNMENT 0 YS2-11b16.q1k vc_4 62 458 5832 5831 F 397 0.00 498 reject_low 5 ALIGNMENT 0 YS2-11b16.q1k vc_5 459 62 37 36 C 398 0.00 498 reject_low 8 ALIGNMENT 0 YS2-11b16.q1k vc_3 458 62 2512 2511 C 397 0.00 498 reject_low 4 ALIGNMENT 0 YS2-11b16.q1k vc_1 458 62 2512 2511 C 397 0.00 498 reject_low 2 ALIGNMENT 1010 YS2-11b17.q1k chr08 1141 37 40719 41823 C 1105 97.65 1147 accept 0 ALIGNMENT 951 YS2-11b17.p1k chr08 29 1108 40604 41696 F 1080 96.39 1205 accept 0 ALIGNMENT 970 YS2-11b18.p1k chr12 63 1141 452674 453761 F 1079 96.11 1248 accept 0 ALIGNMENT 970 YS2-11b18.p1k chr12 63 1141 461811 462898 F 1079 96.11 1248 reject_low 1 ALIGNMENT 967 YS2-11b18.q1k chr12 1128 38 453384 454485 C 1091 96.06 1133 accept 0 ALIGNMENT 948 YS2-11b18.q1k chr12 1103 38 462546 463622 C 1066 96.15 1133 reject_low 1 ALIGNMENT 989 YS2-11b21.p1k chr11 1171 29 352244 353395 C 1143 96.33 1171 accept 0 ALIGNMENT 954 YS2-11b21.q1k chr11 30 1084 349180 350239 F 1055 97.82 1085 accept 0 ALIGNMENT 934 YS2-11b22.q1k chr03 1073 30 242409 243450 C 1044 97.51 1080 accept_chi 1 ALIGNMENT 1072 YS2-11b22.p1k chr09 35 1181 47834 48980 F 1147 98.08 1181 accept_chi 0 ALIGNMENT 926 YS2-11b23.q1k chr08 29 1033 312329 313330 F 1005 98.51 1033 accept 0 ALIGNMENT 985 YS2-11b23.p1k chr08 1141 28 312700 313824 C 1114 96.77 1141 accept 0 ALIGNMENT 901 YS2-11b24.p1k chr09 1143 29 138711 139812 C 1115 94.89 1143 accept 0 ALIGNMENT 707 YS2-11b24.q1k chr09 28 885 138386 139237 F 858 95.57 1105 accept 0 ALIGNMENT 1000 YS2-11c01.q1k chr12 40 1127 458246 459338 F 1088 98.81 1127 accept 0 ALIGNMENT 1000 YS2-11c01.q1k chr12 40 1127 467383 468475 F 1088 98.81 1127 accept 1 ALIGNMENT 917 YS2-11c03.p1k chr10 30 1056 548757 549789 F 1027 96.79 1198 accept 0 ALIGNMENT 0 YS2-11c05.q1k vc_4 62 619 5831 5830 F 558 0.00 660 reject_low 5 ALIGNMENT 0 YS2-11c05.q1k vc_5 621 62 5064 5063 C 560 0.00 660 reject_low 6 ALIGNMENT 38 YS2-11c05.q1k vc_7 623 660 13525 13562 F 38 100.00 660 reject_low 7 ALIGNMENT 526 YS2-11c05.q1k chr14 619 39 393661 394240 C 581 97.93 660 accept_chi 0 ALIGNMENT 36 YS2-11c05.q1k vc_5 657 622 1 36 C 36 100.00 660 reject_low 8 ALIGNMENT 0 YS2-11c05.q1k vc_7 62 622 13525 13524 F 561 0.00 660 reject_low 7 ALIGNMENT 39 YS2-11c05.q1k vc_5 660 622 5025 5063 C 39 100.00 660 reject_low 6 ALIGNMENT 41 YS2-11c05.q1k vc_2 660 620 2105 2145 C 41 100.00 660 reject_low 3 ALIGNMENT 0 YS2-11c05.q1k vc_2 619 62 2146 2145 C 558 0.00 660 reject_low 3 ALIGNMENT 41 YS2-11c05.q1k vc_3 660 620 2472 2512 C 41 100.00 660 reject_low 4 ALIGNMENT 41 YS2-11c05.q1k vc_4 620 660 5831 5871 F 41 100.00 660 reject_low 5 ALIGNMENT 0 YS2-11c05.q1k vc_1 619 62 2513 2512 C 558 0.00 660 reject_low 2 ALIGNMENT 0 YS2-11c05.p1k chr14 609 626 394240 394239 F 18 0.00 626 accept_chi 1 ALIGNMENT 0 YS2-11c05.q1k vc_5 621 62 37 36 C 560 0.00 660 reject_low 8 ALIGNMENT 524 YS2-11c05.p1k chr14 29 608 393661 394240 F 580 97.93 626 accept_chi 1 ALIGNMENT 41 YS2-11c05.q1k vc_1 660 620 2472 2512 C 41 100.00 660 reject_low 2 ALIGNMENT 0 YS2-11c05.q1k chr14 660 620 393662 393661 C 41 0.00 660 accept_chi 0 ALIGNMENT 0 YS2-11c05.q1k vc_3 619 62 2513 2512 C 558 0.00 660 reject_low 4 ALIGNMENT 341 YS2-11c06.q1k chr12 75 669 393317 393911 F 595 87.06 1274 accept 0 ALIGNMENT 539 YS2-11c06.p1k chr12 842 48 398470 399264 C 795 89.69 1274 accept 0 ALIGNMENT 989 YS2-11c08.q1k chr02 35 1177 769960 771104 F 1143 96.33 1203 accept 0 ALIGNMENT 1026 YS2-11c08.p1k chr02 1182 28 770221 771391 C 1155 97.06 1239 accept 0 ALIGNMENT 0 YS2-11c11.q1k vc_3 404 62 2513 2512 C 343 0.00 445 reject_low 3 ALIGNMENT 41 YS2-11c11.q1k vc_3 445 405 2472 2512 C 41 100.00 445 reject_low 3 ALIGNMENT 0 YS2-11c11.p1k chr04 459 441 955079 955078 C 19 0.00 459 accept_chi 1 ALIGNMENT 0 YS2-11c11.q1k vc_5 406 62 37 36 C 345 0.00 445 reject_low 7 ALIGNMENT 36 YS2-11c11.q1k vc_5 442 407 1 36 C 36 100.00 445 reject_low 7 ALIGNMENT 367 YS2-11c11.q1k chr04 29 404 955079 955454 F 376 99.47 445 accept_chi 0 ALIGNMENT 0 YS2-11c11.q1k vc_1 404 62 2513 2512 C 343 0.00 445 reject_low 2 ALIGNMENT 0 YS2-11c11.q1k vc_5 406 62 5064 5063 C 345 0.00 445 reject_low 5 ALIGNMENT 41 YS2-11c11.q1k vc_4 405 445 5831 5871 F 41 100.00 445 reject_low 4 ALIGNMENT 0 YS2-11c11.q1k vc_4 62 404 5831 5830 F 343 0.00 445 reject_low 4 ALIGNMENT 39 YS2-11c11.q1k vc_5 445 407 5025 5063 C 39 100.00 445 reject_low 5 ALIGNMENT 360 YS2-11c11.p1k chr04 440 65 955078 955454 C 376 98.94 459 accept_chi 1 ALIGNMENT 38 YS2-11c11.q1k vc_7 408 445 13525 13562 F 38 100.00 445 reject_low 6 ALIGNMENT 0 YS2-11c11.q1k vc_7 62 407 13525 13524 F 346 0.00 445 reject_low 6 ALIGNMENT 0 YS2-11c11.q1k chr04 405 445 955454 955453 F 41 0.00 445 accept_chi 0 ALIGNMENT 41 YS2-11c11.q1k vc_1 445 405 2472 2512 C 41 100.00 445 reject_low 2 ALIGNMENT 962 YS2-11c12.p1k chr15 27 1201 977486 978666 F 1175 95.49 1253 accept 0 ALIGNMENT 940 YS2-11c12.q1k chr15 1155 38 981538 982644 C 1118 96.51 1196 accept 0 ALIGNMENT 999 YS2-11c13.q1k chr09 38 1161 98566 99684 F 1124 96.98 1164 accept 0 ALIGNMENT 965 YS2-11c13.p1k chr09 1172 55 102113 103239 C 1118 96.69 1200 accept 0 ALIGNMENT 315 YS2-11c13.q1k chr14 38 567 493996 494524 F 530 86.98 1164 reject_low 1 ALIGNMENT 0 YS2-11c13.q1k chr14 568 814 494524 494523 F 247 0.00 1164 reject_low 1 ALIGNMENT 0 YS2-11c14.p1k vc_1 1004 62 2473 2472 C 943 0.00 1231 reject_low 8 ALIGNMENT 0 YS2-11c14.q1k chr14 62 934 357052 357051 F 873 0.00 1224 reject_low 7 ALIGNMENT 103 YS2-11c14.p1k vc_1 1224 1005 1873 2105 C 220 84.09 1231 reject_low 1 ALIGNMENT 0 YS2-11c14.p1k vc_7 62 1004 100 99 F 943 0.00 1231 reject_low 5 ALIGNMENT 0 YS2-11c14.p1k vc_1 1004 62 2106 2105 C 943 0.00 1231 reject_low 1 ALIGNMENT 0 YS2-11c14.p1k vc_2 1004 62 2106 2105 C 943 0.00 1231 reject_low 2 ALIGNMENT 858 YS2-11c14.p1k chr14 982 27 356166 357115 C 956 97.91 1231 accept 0 ALIGNMENT 0 YS2-11c14.p1k vc_5 1004 62 5026 5025 C 943 0.00 1231 reject_low 4 ALIGNMENT 0 YS2-11c14.p1k vc_7 62 1004 13562 13561 F 943 0.00 1231 reject_low 6 ALIGNMENT 103 YS2-11c14.p1k vc_5 1224 1005 4793 5025 C 220 84.09 1231 reject_low 4 ALIGNMENT 103 YS2-11c14.p1k vc_7 1005 1224 13562 13794 F 220 83.64 1231 reject_low 6 ALIGNMENT 26 YS2-11c14.p1k vc_1 1035 1005 2441 2472 C 31 96.77 1231 reject_low 8 ALIGNMENT 0 YS2-11c14.p1k vc_4 62 1004 5871 5870 F 943 0.00 1231 reject_low 3 ALIGNMENT 103 YS2-11c14.p1k vc_7 1005 1224 100 332 F 220 83.64 1231 reject_low 5 ALIGNMENT 24 YS2-11c14.q1k chr14 935 981 357052 357096 F 47 85.11 1224 reject_low 7 ALIGNMENT 804 YS2-11c14.q1k chr14 36 888 356162 357014 F 853 98.59 1224 accept 0 ALIGNMENT 103 YS2-11c14.p1k vc_2 1224 1005 1873 2105 C 220 84.09 1231 reject_low 2 ALIGNMENT 103 YS2-11c14.p1k vc_4 1005 1224 5871 6103 F 220 83.64 1231 reject_low 3 ALIGNMENT 41 YS2-11c15.q1k vc_3 346 306 2472 2512 C 41 100.00 346 reject_low 3 ALIGNMENT 41 YS2-11c15.q1k vc_4 306 346 5831 5871 F 41 100.00 346 reject_low 4 ALIGNMENT 0 YS2-11c15.q1k vc_7 62 308 13525 13524 F 247 0.00 346 reject_low 6 ALIGNMENT 0 YS2-11c15.q1k vc_5 307 62 5064 5063 C 246 0.00 346 reject_low 5 ALIGNMENT 0 YS2-11c15.p1k chr14 335 353 741350 741349 F 19 0.00 353 accept_chi 1 ALIGNMENT 0 YS2-11c15.q1k chr14 346 307 741081 741080 C 40 0.00 346 accept_chi 0 ALIGNMENT 0 YS2-11c15.q1k vc_1 305 62 2513 2512 C 244 0.00 346 reject_low 2 ALIGNMENT 262 YS2-11c15.q1k chr14 306 36 741080 741350 C 271 99.26 346 accept_chi 0 ALIGNMENT 39 YS2-11c15.q1k vc_5 346 308 5025 5063 C 39 100.00 346 reject_low 5 ALIGNMENT 250 YS2-11c15.p1k chr14 69 334 741085 741350 F 266 98.12 353 accept_chi 1 ALIGNMENT 0 YS2-11c15.q1k vc_4 62 305 5831 5830 F 244 0.00 346 reject_low 4 ALIGNMENT 41 YS2-11c15.q1k vc_1 346 306 2472 2512 C 41 100.00 346 reject_low 2 ALIGNMENT 0 YS2-11c15.q1k vc_5 307 62 37 36 C 246 0.00 346 reject_low 7 ALIGNMENT 38 YS2-11c15.q1k vc_7 309 346 13525 13562 F 38 100.00 346 reject_low 6 ALIGNMENT 0 YS2-11c15.q1k vc_3 305 62 2513 2512 C 244 0.00 346 reject_low 3 ALIGNMENT 36 YS2-11c15.q1k vc_5 343 308 1 36 C 36 100.00 346 reject_low 7 ALIGNMENT 999 YS2-11c16.q1k chr14 1176 28 316137 317293 C 1149 96.34 1179 accept 0 ALIGNMENT 1010 YS2-11c16.p1k chr14 23 1250 312708 313943 F 1228 95.11 1261 accept 0 ALIGNMENT 936 YS2-11c17.p1k chr07 62 1085 3303 4332 F 1024 98.63 1229 ambiguous_tel 0 ALIGNMENT 936 YS2-11c17.q1k chr12 1077 36 14319 15363 C 1042 97.31 1119 ambiguous_tel 1 ALIGNMENT 978 YS2-11c18.q1k chr12 1118 37 14282 15363 C 1082 97.60 1156 ambiguous_tel 1 ALIGNMENT 1014 YS2-11c18.p1k chr07 25 1239 3303 4529 F 1215 96.13 1239 ambiguous_tel 0 ALIGNMENT 0 YS2-11c19.q1k chr05 144 843 81239 81238 F 700 0.00 1101 reject_low 5 ALIGNMENT 0 YS2-11c19.q1k chr05 62 101 81198 81197 F 40 0.00 1101 reject_low 5 ALIGNMENT 23 YS2-11c19.q1k chr05 102 143 81198 81239 F 42 100.00 1101 reject_low 5 ALIGNMENT 0 YS2-11c19.q1k chr05 843 151 142943 142942 C 693 0.00 1101 reject_low 3 ALIGNMENT 0 YS2-11c19.q1k chr12 143 843 701257 701256 F 701 0.00 1101 reject_low 4 ALIGNMENT 23 YS2-11c19.q1k chr12 95 142 701210 701257 F 48 95.83 1101 reject_low 4 ALIGNMENT 0 YS2-11c19.q1k chr04 143 843 390509 390508 F 701 0.00 1101 reject_low 1 ALIGNMENT 28 YS2-11c19.q1k chr16 95 148 650495 650548 F 54 96.30 1101 reject_low 2 ALIGNMENT 0 YS2-11c19.q1k chr05 102 62 142990 142989 C 41 0.00 1101 reject_low 3 ALIGNMENT 23 YS2-11c19.q1k chr05 150 103 142942 142989 C 48 97.92 1101 reject_low 3 ALIGNMENT 0 YS2-11c19.q1k chr16 62 94 650495 650494 F 33 0.00 1101 reject_low 2 ALIGNMENT 0 YS2-11c19.q1k chr04 62 78 390446 390445 F 17 0.00 1101 reject_low 1 ALIGNMENT 0 YS2-11c19.q1k chr12 62 94 701210 701209 F 33 0.00 1101 reject_low 4 ALIGNMENT 927 YS2-11c19.q1k chr07 1101 39 466756 467812 C 1063 97.46 1101 accept 0 ALIGNMENT 0 YS2-11c19.q1k chr16 149 843 650548 650547 F 695 0.00 1101 reject_low 2 ALIGNMENT 935 YS2-11c19.p1k chr07 32 1135 463305 464419 F 1104 96.47 1171 accept 0 ALIGNMENT 27 YS2-11c19.q1k chr04 79 142 390446 390509 F 64 89.06 1101 reject_low 1 ALIGNMENT 36 YS2-11c20.q1k vc_5 342 307 1 36 C 36 100.00 345 reject_low 7 ALIGNMENT 0 YS2-11c20.q1k chr15 306 345 100620 100619 F 40 0.00 345 accept_chi 1 ALIGNMENT 0 YS2-11c20.q1k vc_3 305 62 2512 2511 C 244 0.00 345 reject_low 3 ALIGNMENT 40 YS2-11c20.q1k vc_3 345 306 2472 2511 C 40 100.00 345 reject_low 3 ALIGNMENT 40 YS2-11c20.q1k vc_1 345 306 2472 2511 C 40 100.00 345 reject_low 2 ALIGNMENT 0 YS2-11c20.q1k vc_5 306 62 5064 5063 C 245 0.00 345 reject_low 5 ALIGNMENT 0 YS2-11c20.q1k vc_7 62 307 13525 13524 F 246 0.00 345 reject_low 6 ALIGNMENT 40 YS2-11c20.q1k vc_4 306 345 5832 5871 F 40 100.00 345 reject_low 4 ALIGNMENT 0 YS2-11c20.p1k chr15 324 306 100344 100343 C 19 0.00 324 accept_chi 0 ALIGNMENT 265 YS2-11c20.q1k chr15 32 305 100346 100620 F 274 99.64 345 accept_chi 1 ALIGNMENT 38 YS2-11c20.q1k vc_7 308 345 13525 13562 F 38 100.00 345 reject_low 6 ALIGNMENT 268 YS2-11c20.p1k chr15 305 29 100343 100620 C 277 99.64 324 accept_chi 0 ALIGNMENT 0 YS2-11c20.q1k vc_1 305 62 2512 2511 C 244 0.00 345 reject_low 2 ALIGNMENT 39 YS2-11c20.q1k vc_5 345 307 5025 5063 C 39 100.00 345 reject_low 5 ALIGNMENT 0 YS2-11c20.q1k vc_4 62 305 5832 5831 F 244 0.00 345 reject_low 4 ALIGNMENT 0 YS2-11c20.q1k vc_5 306 62 37 36 C 245 0.00 345 reject_low 7 ALIGNMENT 948 YS2-11c21.p1k chr04 62 1098 823273 824311 F 1037 98.46 1191 accept 0 ALIGNMENT 908 YS2-11c21.q1k chr04 1065 29 826652 827684 C 1037 97.30 1080 accept 0 ALIGNMENT 905 YS2-11c22.q1k chr10 1094 37 329659 330706 C 1058 97.07 1113 accept 0 ALIGNMENT 1009 YS2-11c22.p1k chr10 26 1194 329049 330228 F 1169 96.75 1197 accept 0 ALIGNMENT 0 YS2-11c23.q1k vc_4 62 223 5831 5830 F 162 0.00 264 reject_low 4 ALIGNMENT 0 YS2-11c23.p1k chr05 277 259 74312 74311 C 19 0.00 277 accept_chi 1 ALIGNMENT 174 YS2-11c23.p1k chr05 258 67 74311 74501 C 192 97.40 277 accept_chi 1 ALIGNMENT 41 YS2-11c23.q1k vc_4 224 264 5831 5871 F 41 100.00 264 reject_low 4 ALIGNMENT 38 YS2-11c23.q1k vc_7 227 264 13525 13562 F 38 100.00 264 reject_low 6 ALIGNMENT 0 YS2-11c23.q1k chr05 226 264 74510 74509 F 39 0.00 264 accept_chi 0 ALIGNMENT 36 YS2-11c23.q1k vc_5 261 226 1 36 C 36 100.00 264 reject_low 7 ALIGNMENT 0 YS2-11c23.q1k vc_5 225 62 37 36 C 164 0.00 264 reject_low 7 ALIGNMENT 39 YS2-11c23.q1k vc_5 264 226 5025 5063 C 39 100.00 264 reject_low 5 ALIGNMENT 0 YS2-11c23.q1k vc_3 223 62 2513 2512 C 162 0.00 264 reject_low 3 ALIGNMENT 0 YS2-11c23.q1k vc_1 223 62 2513 2512 C 162 0.00 264 reject_low 2 ALIGNMENT 187 YS2-11c23.q1k chr05 31 225 74315 74510 F 195 98.97 264 accept_chi 0 ALIGNMENT 0 YS2-11c23.q1k vc_5 225 62 5064 5063 C 164 0.00 264 reject_low 5 ALIGNMENT 41 YS2-11c23.q1k vc_1 264 224 2472 2512 C 41 100.00 264 reject_low 2 ALIGNMENT 0 YS2-11c23.q1k vc_7 62 226 13525 13524 F 165 0.00 264 reject_low 6 ALIGNMENT 41 YS2-11c23.q1k vc_3 264 224 2472 2512 C 41 100.00 264 reject_low 3 ALIGNMENT 942 YS2-11d01.q1k chr10 1140 30 29650 30764 C 1111 95.86 1144 accept 0 ALIGNMENT 1000 YS2-11d01.p1k chr10 31 1210 27224 28406 F 1180 95.93 1213 accept 0 ALIGNMENT 134 YS2-11d01.p1k chr04 1019 324 1159993 1160688 C 696 74.28 1213 reject_low 2 ALIGNMENT 0 YS2-11d01.p1k chr04 873 819 1154803 1154802 C 55 0.00 1213 reject_low 1 ALIGNMENT 149 YS2-11d01.p1k chr04 818 31 1154802 1155589 C 788 73.98 1213 reject_low 1 ALIGNMENT 0 YS2-11d01.p1k chr08 287 62 288209 288208 C 226 0.00 1213 reject_low 3 ALIGNMENT 0 YS2-11d01.p1k chr04 323 62 1160689 1160688 C 262 0.00 1213 reject_low 2 ALIGNMENT 123 YS2-11d01.p1k chr08 1019 288 287477 288208 C 732 73.09 1213 reject_low 3 ALIGNMENT 0 YS2-11d02.p1k chr05 529 304 305004 305229 C 226 0.00 1239 reject_low 1 ALIGNMENT 44 YS2-11d02.p1k chr05 657 530 304876 305003 C 128 78.12 1239 reject_low 1 ALIGNMENT 25 YS2-11d02.p1k chr05 948 869 304585 304664 C 80 73.75 1239 reject_low 1 ALIGNMENT 0 YS2-11d02.p1k chr05 868 658 304665 304875 C 211 0.00 1239 reject_low 1 ALIGNMENT 1036 YS2-11d02.p1k chr15 1132 32 1040215 1041316 C 1101 98.09 1239 accept 0 ALIGNMENT 965 YS2-11d02.q1k chr15 37 1156 1037650 1038773 F 1120 96.16 1160 accept 0 ALIGNMENT 56 YS2-11d02.p1k chr05 303 43 305230 305490 C 261 73.95 1239 reject_low 1 ALIGNMENT 873 YS2-11d04.p1k chr04 1072 40 725540 726587 C 1033 96.22 1220 accept 0 ALIGNMENT 875 YS2-11d05.q1k chr07 38 1128 833582 834689 F 1091 94.78 1176 accept 0 ALIGNMENT 956 YS2-11d05.p1k chr07 1189 27 836962 838140 C 1163 94.93 1220 accept 0 ALIGNMENT 883 YS2-11d06.q1k chr12 1087 29 359200 360278 C 1059 95.28 1145 accept 0 ALIGNMENT 907 YS2-11d06.p1k chr12 44 1114 355457 356539 F 1071 96.36 1230 accept 0 ALIGNMENT 951 YS2-11d08.p1k chr04 29 1101 165778 166855 F 1073 96.92 1244 accept 0 ALIGNMENT 839 YS2-11d08.q1k chr04 990 29 169893 170858 C 962 96.57 1167 accept 0 ALIGNMENT 0 YS2-11d09.q1k chrm 484 870 10797 10796 F 387 0.00 1169 reject_low 11 ALIGNMENT 0 YS2-11d09.p1k chrm 638 62 2158 2157 C 577 0.00 1271 reject_low 9 ALIGNMENT 53 YS2-11d09.q1k chrm 417 514 11491 11588 F 98 87.76 1169 reject_low 5 ALIGNMENT 44 YS2-11d09.q1k chrm 430 483 10744 10797 F 54 94.44 1169 reject_low 11 ALIGNMENT 476 YS2-11d09.q1k chrm 86 1096 68706 69753 F 1011 91.49 1169 reject_low 1 ALIGNMENT 39 YS2-11d09.q1k chrm 431 473 11046 11088 F 43 100.00 1169 reject_low 12 ALIGNMENT 0 YS2-11d09.q1k chrm 62 430 11046 11045 F 369 0.00 1169 reject_low 12 ALIGNMENT 46 YS2-11d09.q1k chrm 408 473 65749 65813 F 66 90.91 1169 reject_low 3 ALIGNMENT 0 YS2-11d09.p1k chrm 556 62 52918 52917 C 495 0.00 1271 reject_low 4 ALIGNMENT 0 YS2-11d09.p1k chrm 966 707 2090 2089 C 260 0.00 1271 reject_low 9 ALIGNMENT 0 YS2-11d09.p1k chrm 966 701 52773 52772 C 266 0.00 1271 reject_low 4 ALIGNMENT 49 YS2-11d09.p1k chrm 657 707 2750 2800 F 51 100.00 1271 reject_low 15 ALIGNMENT 0 YS2-11d09.p1k chrm 966 708 76589 76588 C 259 0.00 1271 reject_low 2 ALIGNMENT 0 YS2-11d09.q1k chrm 62 410 35785 35784 F 349 0.00 1169 reject_low 8 ALIGNMENT 38 YS2-11d09.q1k chrm 473 426 33449 33495 C 48 95.83 1169 reject_low 17 ALIGNMENT 0 YS2-11d09.p1k chrm 62 656 2750 2749 F 595 0.00 1271 reject_low 15 ALIGNMENT 38 YS2-11d09.p1k chrm 659 706 33449 33495 F 48 95.83 1271 reject_low 16 ALIGNMENT 52 YS2-11d09.p1k chrm 707 613 76588 76680 C 95 88.42 1271 reject_low 2 ALIGNMENT 557 YS2-11d09.p1k chrm 1094 29 68661 69760 C 1066 93.34 1271 accept 0 ALIGNMENT 0 YS2-11d09.q1k chrm 266 62 33534 33533 C 205 0.00 1169 reject_low 17 ALIGNMENT 0 YS2-11d09.q1k chrm 533 870 69543 69542 F 338 0.00 1169 reject_low 2 ALIGNMENT 29 YS2-11d09.p1k chrm 657 701 4535 4579 F 45 91.11 1271 reject_low 13 ALIGNMENT 0 YS2-11d09.q1k chrm 496 870 35867 35866 F 375 0.00 1169 reject_low 8 ALIGNMENT 44 YS2-11d09.p1k chrm 706 639 2089 2157 C 68 89.71 1271 reject_low 9 ALIGNMENT 41 YS2-11d09.q1k chrm 80 39 2843 2884 C 42 100.00 1169 reject_low 10 ALIGNMENT 46 YS2-11d09.q1k chrm 411 495 35785 35867 F 85 87.06 1169 reject_low 8 ALIGNMENT 0 YS2-11d09.p1k chrm 602 62 3163 3162 C 541 0.00 1271 reject_low 7 ALIGNMENT 0 YS2-11d09.q1k chrm 476 870 10436 10435 F 395 0.00 1169 reject_low 14 ALIGNMENT 34 YS2-11d09.q1k chrm 432 475 10394 10436 F 44 97.73 1169 reject_low 14 ALIGNMENT 20 YS2-11d09.q1k chrm 308 267 33492 33533 C 42 97.62 1169 reject_low 17 ALIGNMENT 0 YS2-11d09.p1k chrm 599 62 69544 69543 C 538 0.00 1271 reject_low 1,3 ALIGNMENT 0 YS2-11d09.q1k chrm 62 407 65749 65748 F 346 0.00 1169 reject_low 3 ALIGNMENT 510 YS2-11d09.q1k chrm 38 986 68658 69644 F 949 92.41 1169 accept 0 ALIGNMENT 0 YS2-11d09.p1k chrm 612 62 76681 76680 C 551 0.00 1271 reject_low 2 ALIGNMENT 20 YS2-11d09.p1k chrm 824 865 33492 33533 F 42 97.62 1271 reject_low 16 ALIGNMENT 0 YS2-11d09.q1k chrm 474 870 65813 65812 F 397 0.00 1169 reject_low 3 ALIGNMENT 65 YS2-11d09.p1k chrm 705 600 69439 69543 C 106 90.57 1271 reject_low 1,3 ALIGNMENT 0 YS2-11d09.p1k chrm 702 966 4579 4578 F 265 0.00 1271 reject_low 13 ALIGNMENT 52 YS2-11d09.q1k chrm 425 519 76588 76680 F 95 88.42 1169 reject_low 6 ALIGNMENT 0 YS2-11d09.p1k chrm 707 823 33496 33491 F 117 0.00 1271 reject_low 16 ALIGNMENT 0 YS2-11d09.p1k chrm 62 656 4535 4534 F 595 0.00 1271 reject_low 13 ALIGNMENT 0 YS2-11d09.p1k chrm 966 706 69440 69439 C 261 0.00 1271 reject_low 1,3 ALIGNMENT 0 YS2-11d09.p1k chrm 62 658 33449 33448 F 597 0.00 1271 reject_low 16 ALIGNMENT 40 YS2-11d09.p1k chrm 707 603 3052 3162 C 105 83.81 1271 reject_low 7 ALIGNMENT 0 YS2-11d09.q1k chrm 424 81 2801 2842 C 344 0.00 1169 reject_low 10 ALIGNMENT 0 YS2-11d09.q1k chrm 62 431 10394 10393 F 370 0.00 1169 reject_low 14 ALIGNMENT 0 YS2-11d09.q1k chrm 62 85 68706 68705 F 24 0.00 1169 reject_low 1 ALIGNMENT 0 YS2-11d09.p1k chrm 866 966 33533 33532 F 101 0.00 1271 reject_low 16 ALIGNMENT 0 YS2-11d09.q1k chrm 425 309 33496 33491 C 117 0.00 1169 reject_low 17 ALIGNMENT 0 YS2-11d09.p1k chrm 966 708 3053 3052 C 259 0.00 1271 reject_low 7 ALIGNMENT 0 YS2-11d09.q1k chrm 870 474 33450 33449 C 397 0.00 1169 reject_low 17 ALIGNMENT 0 YS2-11d09.p1k chrm 708 1041 2801 2830 F 334 0.00 1271 reject_low 15 ALIGNMENT 65 YS2-11d09.q1k chrm 427 532 69439 69543 F 106 90.57 1169 reject_low 2 ALIGNMENT 0 YS2-11d09.q1k chrm 520 870 76680 76679 F 351 0.00 1169 reject_low 6 ALIGNMENT 0 YS2-11d09.q1k chrm 62 429 10744 10743 F 368 0.00 1169 reject_low 11 ALIGNMENT 0 YS2-11d09.q1k chrm 62 416 11491 11490 F 355 0.00 1169 reject_low 5 ALIGNMENT 0 YS2-11d09.q1k chrm 870 476 2751 2750 C 395 0.00 1169 reject_low 10 ALIGNMENT 0 YS2-11d09.q1k chrm 62 424 76588 76587 F 363 0.00 1169 reject_low 6 ALIGNMENT 0 YS2-11d09.q1k chrm 474 870 11088 11087 F 397 0.00 1169 reject_low 12 ALIGNMENT 49 YS2-11d09.q1k chrm 475 425 2750 2800 C 51 100.00 1169 reject_low 10 ALIGNMENT 0 YS2-11d09.q1k chrm 62 426 69439 69438 F 365 0.00 1169 reject_low 2 ALIGNMENT 0 YS2-11d09.q1k chrm 515 870 11588 11587 F 356 0.00 1169 reject_low 5 ALIGNMENT 31 YS2-11d09.p1k chrm 700 557 52772 52917 C 144 80.56 1271 reject_low 4 ALIGNMENT 25 YS2-11d09.p1k chrm 1042 1094 2831 2882 F 53 84.91 1271 reject_low 15 ALIGNMENT 0 YS2-11d10.p1k chr15 911 402 30877 30876 C 510 0.00 1228 reject_low 7 ALIGNMENT 0 YS2-11d10.p1k chr15 911 638 31229 31228 C 274 0.00 1228 reject_low 6 ALIGNMENT 84 YS2-11d10.p1k chr15 637 425 31087 31299 C 213 81.69 1228 reject_low 3 ALIGNMENT 0 YS2-11d10.p1k chr15 529 62 31258 31257 C 468 0.00 1228 reject_low 4 ALIGNMENT 0 YS2-11d10.p1k chr15 546 62 31319 31318 C 485 0.00 1228 reject_low 6 ALIGNMENT 63 YS2-11d10.p1k chr15 636 527 31190 31299 C 110 86.36 1228 reject_low 5 ALIGNMENT 145 YS2-11d10.q1k chr10 915 1143 20974 21206 F 229 87.34 1166|2,0 reject_low 2 ALIGNMENT 0 YS2-11d10.p1k chr15 911 638 31088 31087 C 274 0.00 1228 reject_low 3 ALIGNMENT 0 YS2-11d10.q1k chr12 611 833 291275 291491 F 223 0.00 1166 reject_low 8 ALIGNMENT 0 YS2-11d10.p1k chr15 303 62 30983 30982 C 242 0.00 1228 reject_low 7 ALIGNMENT 0 YS2-11d10.p1k chr15 526 62 31300 31299 C 465 0.00 1228 reject_low 5 ALIGNMENT 0 YS2-11d10.p1k chr15 911 637 31191 31190 C 275 0.00 1228 reject_low 5 ALIGNMENT 71 YS2-11d10.p1k chr15 639 530 31148 31257 C 110 89.09 1228 reject_low 4 ALIGNMENT 23 YS2-11d10.p1k chr15 334 304 30952 30982 C 31 93.55 1228 reject_low 7 ALIGNMENT 742 YS2-11d10.q1k chr09 37 917 19975 20855 F 881 94.55 1166|0,1 reject_low 1 ALIGNMENT 0 YS2-11d10.p1k chr15 911 640 31149 31148 C 272 0.00 1228 reject_low 4 ALIGNMENT 0 YS2-11d10.p1k chr15 424 62 31300 31299 C 363 0.00 1228 reject_low 3 ALIGNMENT 56 YS2-11d10.p1k chr15 637 547 31228 31318 C 91 87.91 1228 reject_low 6 ALIGNMENT 806 YS2-11d10.q1k chr15 37 918 25730 26611 F 882 96.94 1166|0,2 accept 0 ALIGNMENT 23 YS2-11d10.q1k chr12 834 870 291492 291528 F 37 83.78 1166 reject_low 8 ALIGNMENT 525 YS2-11d10.p1k chr15 1131 29 30368 31592 C 1103 84.41 1228 accept 0 ALIGNMENT 0 YS2-11d10.p1k chr09 744 220 25355 25897 C 525 0.00 1228 reject_low 1 ALIGNMENT 23 YS2-11d10.p1k chr15 401 370 30876 30907 C 32 90.62 1228 reject_low 7 ALIGNMENT 43 YS2-11d10.p1k chr09 219 40 25898 26080 C 180 75.56 1228 reject_low 1 ALIGNMENT 0 YS2-11d10.q1k chr09 917 916 20855 20995 F 0 0.00 1166 reject_low 1 ALIGNMENT 0 YS2-11d10.q1k chr15 62 914 26749 26748 F 853 0.00 1166 reject_low 3,4,5,6,7 ALIGNMENT 0 YS2-11d10.p1k chr15 369 335 30908 30951 C 35 0.00 1228 reject_low 7 ALIGNMENT 0 YS2-11d10.q1k chr15 917 916 26610 26750 F 0 0.00 1166 accept 0 ALIGNMENT 0 YS2-11d10.q1k chr12 254 471 290918 291135 F 218 0.00 1166 reject_low 8 ALIGNMENT 773 YS2-11d10.q1k chr10 37 918 19955 20836 F 882 95.69 1166|0,2 reject_low 2 ALIGNMENT 44 YS2-11d10.q1k chr12 44 253 290708 290917 F 210 73.81 1166 reject_low 8 ALIGNMENT 82 YS2-11d10.p1k chr09 1002 745 25091 25354 C 258 78.68 1228 reject_low 1 ALIGNMENT 161 YS2-11d10.q1k chr09 915 1166 20994 21249 F 252 88.10 1166|2,0 reject_low 1 ALIGNMENT 0 YS2-11d10.q1k chr10 917 916 20835 20975 F 0 0.00 1166 reject_low 2 ALIGNMENT 28 YS2-11d10.q1k chr12 472 610 291136 291274 F 139 73.38 1166 reject_low 8 ALIGNMENT 170 YS2-11d10.q1k chr15 915 1166 26749 27004 F 252 89.29 1166|2,0 accept 0 reject_low 3,4,5,6,7 ALIGNMENT 991 YS2-11d12.q1k chr09 37 1168 283886 285018 F 1132 97.26 1170 accept 0 ALIGNMENT 1002 YS2-11d12.p1k chr09 1220 26 287414 288618 C 1195 96.32 1247 accept 0 ALIGNMENT 0 YS2-11d13.p1k vc_7 77 1039 13566 13565 F 963 0.00 1244 reject_low 1 ALIGNMENT 881 YS2-11d13.p1k chr14 1017 59 356164 357115 C 959 98.44 1244 accept 0 ALIGNMENT 73 YS2-11d13.p1k vc_7 1040 1171 13566 13711 F 132 88.64 1244 reject_low 1 ALIGNMENT 828 YS2-11d13.q1k chr14 39 998 356162 357115 F 960 94.69 1188 accept 0 ALIGNMENT 1005 YS2-11d14.p1k chr12 36 1156 34745 35869 F 1121 96.79 1241 accept 0 ALIGNMENT 1033 YS2-11d14.q1k chr12 1168 37 38441 39586 C 1132 97.88 1173 accept 0 ALIGNMENT 923 YS2-11d15.q1k chr14 1129 33 730024 731131 C 1097 96.81 1172 accept 0 ALIGNMENT 1014 YS2-11d15.p1k chr14 60 1279 724422 725654 F 1220 95.25 1279 accept 0 ALIGNMENT 0 YS2-11d16.q1k chr15 589 839 345115 345114 F 251 0.00 1189 reject_low 14 ALIGNMENT 0 YS2-11d16.q1k chr15 62 458 344830 344829 F 397 0.00 1189 reject_low 4,5 ALIGNMENT 0 YS2-11d16.q1k chr15 776 790 344739 344741 F 15 0.00 1189 reject_low 18 ALIGNMENT 0 YS2-11d16.q1k chr15 62 448 344892 344891 F 387 0.00 1189 reject_low 8,14,16 ALIGNMENT 24 YS2-11d16.q1k chr15 459 499 344830 344870 F 41 87.80 1189 reject_low 4,5 ALIGNMENT 0 YS2-11d16.q1k chr15 766 765 344729 344752 F 0 0.00 1189 reject_low 17 ALIGNMENT 0 YS2-11d16.q1k chr15 500 502 344871 344885 F 3 0.00 1189 reject_low 4 ALIGNMENT 712 YS2-11d16.q1k chr15 30 840 344270 345079 F 811 96.55 1189 accept 0 ALIGNMENT 21 YS2-11d16.q1k chr15 508 559 344687 344738 F 52 80.77 1189 reject_low 6,11 ALIGNMENT 531 YS2-11d16.q1k chr15 503 1189 344778 345470 F 687 94.18 1189 reject_low 1 ALIGNMENT 0 YS2-11d16.q1k chr15 560 610 344739 344741 F 51 0.00 1189 reject_low 11 ALIGNMENT 59 YS2-11d16.q1k chr15 755 840 344742 344827 F 86 90.70 1189|11,0 reject_low 17 ALIGNMENT 136 YS2-11d16.q1k chr15 503 677 344958 345132 F 175 93.14 1189 reject_low 8 ALIGNMENT 0 YS2-11d16.q1k chr15 733 839 345115 345114 F 107 0.00 1189 reject_low 4 ALIGNMENT 25 YS2-11d16.q1k chr15 449 499 344892 344942 F 51 84.31 1189 reject_low 8,14,16 ALIGNMENT 0 YS2-11d16.p1k chr15 297 62 346472 346471 C 236 0.00 1223 reject_low 12 ALIGNMENT 0 YS2-11d16.q1k chr15 500 502 344943 345065 F 3 0.00 1189 reject_low 16 ALIGNMENT 63 YS2-11d16.q1k chr15 503 588 345030 345115 F 86 91.86 1189 reject_low 14 ALIGNMENT 0 YS2-11d16.q1k chr15 62 447 344747 344746 F 386 0.00 1189 reject_low 1,3 ALIGNMENT 25 YS2-11d16.q1k chr15 735 775 344698 344738 F 41 87.80 1189|0,10 reject_low 17,18 ALIGNMENT 45 YS2-11d16.q1k chr05 91 186 175243 175338 F 96 83.33 1189 reject_low 9 ALIGNMENT 0 YS2-11d16.p1k chr15 378 62 346586 346585 C 317 0.00 1223 reject_low 1,3,4,5,6,7,8,10,11,13,14,16,17,18 ALIGNMENT 0 YS2-11d16.q1k chr15 560 574 344739 344741 F 15 0.00 1189 reject_low 6 ALIGNMENT 796 YS2-11d16.p1k chr15 1126 30 345713 346854 C 1097 92.43 1223 accept 0 ALIGNMENT 0 YS2-11d16.q1k chr15 500 502 344871 344849 F 3 0.00 1189 reject_low 5 ALIGNMENT 0 YS2-11d16.q1k chr15 500 502 344799 344813 F 3 0.00 1189 reject_low 3 ALIGNMENT 25 YS2-11d16.q1k chr15 627 667 344698 344738 F 41 87.80 1189|0,10 reject_low 10,13 ALIGNMENT 0 YS2-11d16.p1k chr05 227 779 175539 175538 F 553 0.00 1223 reject_low 2 ALIGNMENT 0 YS2-11d16.q1k chr15 822 839 345132 345131 F 18 0.00 1189 reject_low 3 ALIGNMENT 0 YS2-11d16.q1k chr15 678 839 345132 345131 F 162 0.00 1189 reject_low 8 ALIGNMENT 20 YS2-11d16.q1k chr15 448 499 344747 344798 F 52 80.77 1189 reject_low 1,3 ALIGNMENT 0 YS2-11d16.q1k chr15 62 507 344687 344686 F 446 0.00 1189 reject_low 6,11 ALIGNMENT 0 YS2-11d16.p1k chr15 779 365 346406 346405 C 415 0.00 1223 reject_low 12 ALIGNMENT 0 YS2-11d16.q1k chr15 553 839 345115 345114 F 287 0.00 1189 reject_low 16 ALIGNMENT 191 YS2-11d16.q1k chr15 503 785 344850 345132 F 283 89.75 1189 reject_low 5 ALIGNMENT 0 YS2-11d16.p1k chr15 342 62 346460 346459 C 281 0.00 1223 reject_low 15 ALIGNMENT 0 YS2-11d16.q1k chr15 658 657 344729 344752 F 0 0.00 1189 reject_low 10 ALIGNMENT 0 YS2-11d16.q1k chr05 382 839 175530 175529 F 458 0.00 1189 reject_low 9 ALIGNMENT 26 YS2-11d16.p1k chr15 385 343 346417 346459 C 43 90.70 1223 reject_low 15 ALIGNMENT 161 YS2-11d16.q1k chr15 611 840 344742 344971 F 230 90.87 1189 reject_low 11 ALIGNMENT 160 YS2-11d16.q1k chr15 647 842 344742 344937 F 196 94.90 1189|11,0 reject_low 10 ALIGNMENT 43 YS2-11d16.q1k chr15 503 552 345066 345115 F 50 96.00 1189 reject_low 16 ALIGNMENT 0 YS2-11d16.q1k chr05 187 312 175339 175461 F 126 0.00 1189 reject_low 9 ALIGNMENT 39 YS2-11d16.q1k chr15 791 840 344742 344791 F 50 94.00 1189 reject_low 18 ALIGNMENT 0 YS2-11d16.q1k chr15 786 839 345132 345131 F 54 0.00 1189 reject_low 5 ALIGNMENT 0 YS2-11d16.q1k chr15 62 734 344698 344697 F 673 0.00 1189 reject_low 17,18 ALIGNMENT 198 YS2-11d16.q1k chr15 503 732 344886 345115 F 230 96.09 1189 reject_low 4 ALIGNMENT 0 YS2-11d16.p1k chr15 779 449 346517 346516 C 331 0.00 1223 reject_low 1,3,4,5,6,7,8,10,11,13,14,16,17,18 ALIGNMENT 0 YS2-11d16.q1k chr15 500 502 344943 344957 F 3 0.00 1189 reject_low 8 ALIGNMENT 0 YS2-11d16.q1k chr15 668 682 344739 344741 F 15 0.00 1189 reject_low 13 ALIGNMENT 215 YS2-11d16.q1k chr15 575 840 344742 345007 F 266 94.36 1189 reject_low 6 ALIGNMENT 0 YS2-11d16.q1k chr15 62 458 345010 345009 F 397 0.00 1189 reject_low 7 ALIGNMENT 24 YS2-11d16.q1k chr15 459 499 345010 345050 F 41 87.80 1189 reject_low 7 ALIGNMENT 36 YS2-11d16.p1k chr15 364 298 346405 346471 C 67 88.06 1223 reject_low 12 ALIGNMENT 0 YS2-11d16.q1k chr15 500 839 345050 345049 F 340 0.00 1189 reject_low 7 ALIGNMENT 121 YS2-11d16.q1k chr15 683 840 344742 344899 F 158 93.04 1189 reject_low 13 ALIGNMENT 0 YS2-11d16.p1k chr15 779 386 346418 346417 C 394 0.00 1223 reject_low 15 ALIGNMENT 37 YS2-11d16.p1k chr15 448 379 346516 346585 C 70 88.57 1223 reject_low 1,3,4,5,6,7,8,10,11,13,14,16,17,18 ALIGNMENT 0 YS2-11d16.q1k chr05 62 90 175243 175242 F 29 0.00 1189 reject_low 9 ALIGNMENT 34 YS2-11d16.q1k chr05 313 381 175462 175530 F 69 85.51 1189 reject_low 9 ALIGNMENT 129 YS2-11d16.p1k chr05 43 226 175356 175539 F 184 90.76 1223 reject_low 2 ALIGNMENT 0 YS2-11d16.q1k chr15 62 626 344698 344697 F 565 0.00 1189 reject_low 10,13 ALIGNMENT 0 YS2-11d16.q1k chr15 500 502 344799 344777 F 3 0.00 1189 reject_low 1 ALIGNMENT 214 YS2-11d16.q1k chr15 503 821 344814 345132 F 319 89.66 1189 reject_low 3 ALIGNMENT 0 YS2-11d16.q1k chr15 500 502 344943 345029 F 3 0.00 1189 reject_low 14 ALIGNMENT 324 YS2-11d17.p1k chr05 689 309 63710 64090 C 381 95.28 1230 reject_low 15 ALIGNMENT 599 YS2-11d17.p1k chr07 216 1176 6195 7170 F 961 88.76 1230 reject_low 8 ALIGNMENT 509 YS2-11d17.p1k chr04 703 26 1523200 1523888 C 678 92.48 1230 reject_low 16 ALIGNMENT 360 YS2-11d17.p1k chr16 117 1033 7745 8668 F 917 81.57 1230 reject_low 19 ALIGNMENT 0 YS2-11d17.p1k chr05 913 690 63711 63710 C 224 0.00 1230 reject_low 15 ALIGNMENT 0 YS2-11d17.p1k chr03 500 62 290194 290193 C 439 0.00 1230 reject_low 20 ALIGNMENT 409 YS2-11d17.p1k chr02 772 187 808950 809534 C 586 90.78 1230 reject_low 13 ALIGNMENT 0 YS2-11d17.p1k chr02 186 62 809535 809534 C 125 0.00 1230 reject_low 13 ALIGNMENT 748 YS2-11d17.p1k chr12 1157 26 1062423 1063561 C 1132 89.84 1230 accept 0 ALIGNMENT 538 YS2-11d17.p1k chr03 1176 169 307275 308309 C 1008 85.71 1230 reject_low 10 ALIGNMENT 0 YS2-11d17.p1k chr09 242 62 434363 434362 C 181 0.00 1230 reject_low 12 ALIGNMENT 0 YS2-11d17.p1k chr01 682 913 177031 177030 F 232 0.00 1230 reject_low 17 ALIGNMENT 0 YS2-11d17.p1k chr16 96 116 7717 7744 F 21 0.00 1230 reject_low 19 ALIGNMENT 764 YS2-11d17.p1k chr10 26 1176 8483 9657 F 1151 89.92 1230 reject_low 4 ALIGNMENT 0 YS2-11d17.p1k chr05 308 62 64091 64090 C 247 0.00 1230 reject_low 15 ALIGNMENT 461 YS2-11d17.p1k chr09 1176 243 433407 434362 C 934 84.48 1230 reject_low 12 ALIGNMENT 598 YS2-11d17.p1k chr15 26 971 11266 12209 F 946 89.01 1230 reject_low 9 ALIGNMENT 20 YS2-11d17.p1k chr04 973 924 1522931 1522980 C 50 82.00 1230 reject_low 16 ALIGNMENT 0 YS2-11d17.p1k chr03 913 699 290000 289999 C 215 0.00 1230 reject_low 20 ALIGNMENT 0 YS2-11d17.p1k chr02 913 773 808951 808950 C 141 0.00 1230 reject_low 13 ALIGNMENT 22 YS2-11d17.p1k chr15 95 49 1083425 1083472 C 47 85.11 1230 reject_low 18 ALIGNMENT 0 YS2-11d17.p1k chr04 923 704 1522981 1523199 C 220 0.00 1230 reject_low 16 ALIGNMENT 532 YS2-11d17.p1k chr08 278 1086 11890 12711 F 809 89.25 1230 reject_low 11 ALIGNMENT 21 YS2-11d17.p1k chr16 54 95 7674 7716 F 42 85.71 1230 reject_low 19 ALIGNMENT 0 YS2-11d17.p1k chr01 62 284 176631 176630 F 223 0.00 1230 reject_low 17 ALIGNMENT 855 YS2-11d17.p1k chr02 26 1094 7320 8398 F 1069 94.20 1230 reject_low 2 ALIGNMENT 0 YS2-11d17.p1k chr07 913 773 1080212 1080211 C 141 0.00 1230 reject_low 14 ALIGNMENT 0 YS2-11d17.p1k chr07 186 62 1080791 1080790 C 125 0.00 1230 reject_low 14 ALIGNMENT 0 YS2-11d17.p1k chr03 168 62 308310 308309 C 107 0.00 1230 reject_low 10 ALIGNMENT 361 YS2-11d17.p1k chr15 1033 117 1082473 1083396 C 917 81.68 1230 reject_low 18 ALIGNMENT 764 YS2-11d17.p1k chr09 26 1176 8500 9674 F 1151 89.92 1230 reject_low 3 ALIGNMENT 672 YS2-11d17.p1k chr01 43 1176 1534 2685 F 1134 88.01 1230 reject_low 6 ALIGNMENT 0 YS2-11d17.p1k chr07 62 215 6195 6194 F 154 0.00 1230 reject_low 8 ALIGNMENT 20 YS2-11d17.p1k chr13 89 64 923238 923263 C 26 92.31 1230 reject_low 21 ALIGNMENT 982 YS2-11d17.q1k chr12 32 1124 1058226 1059320 F 1093 97.62 1146 accept 0 ALIGNMENT 0 YS2-11d17.p1k chr08 62 277 11890 11889 F 216 0.00 1230 reject_low 11 ALIGNMENT 215 YS2-11d17.p1k chr01 285 681 176631 177031 F 397 85.64 1230 reject_low 17 ALIGNMENT 350 YS2-11d17.p1k chr13 1032 117 922281 923202 C 916 81.33 1230 reject_low 21 ALIGNMENT 0 YS2-11d17.p1k chr13 116 90 923203 923237 C 27 0.00 1230 reject_low 21 ALIGNMENT 0 YS2-11d17.p1k chr15 116 96 1083397 1083424 C 21 0.00 1230 reject_low 18 ALIGNMENT 814 YS2-11d17.p1k chr12 26 1094 12798 13875 F 1069 92.80 1230 reject_low 5 ALIGNMENT 602 YS2-11d17.p1k chr11 26 1176 1521 2700 F 1151 85.49 1230 reject_low 7 ALIGNMENT 848 YS2-11d17.p1k chr14 1134 26 781446 782565 C 1109 92.97 1230 reject_low 1 ALIGNMENT 59 YS2-11d17.p1k chr03 698 501 289999 290193 C 198 78.79 1230 reject_low 20 ALIGNMENT 406 YS2-11d17.p1k chr07 772 187 1080211 1080790 C 586 90.78 1230 reject_low 14 ALIGNMENT 0 YS2-11d18.q1k vc_5 228 62 5064 5063 C 167 0.00 267 reject_low 6 ALIGNMENT 180 YS2-11d18.p1k chr01 221 30 32467 32658 C 192 97.92 237 accept_chi 0 ALIGNMENT 0 YS2-11d18.q1k chr01 227 267 32658 32657 F 41 0.00 267 accept_chi 1 ALIGNMENT 39 YS2-11d18.q1k vc_5 267 229 5025 5063 C 39 100.00 267 reject_low 6 ALIGNMENT 0 YS2-11d18.q1k vc_7 62 229 13525 13524 F 168 0.00 267 reject_low 7 ALIGNMENT 0 YS2-11d18.q1k vc_5 228 62 37 36 C 167 0.00 267 reject_low 8 ALIGNMENT 180 YS2-11d18.q1k chr01 35 226 32467 32658 F 192 97.92 267 accept_chi 1 ALIGNMENT 36 YS2-11d18.q1k vc_5 264 229 1 36 C 36 100.00 267 reject_low 8 ALIGNMENT 41 YS2-11d18.q1k vc_4 227 267 5831 5871 F 41 100.00 267 reject_low 5 ALIGNMENT 0 YS2-11d18.q1k vc_2 226 62 2146 2145 C 165 0.00 267 reject_low 3 ALIGNMENT 0 YS2-11d18.p1k chr01 237 222 32468 32467 C 16 0.00 237 accept_chi 0 ALIGNMENT 0 YS2-11d18.q1k vc_4 62 226 5831 5830 F 165 0.00 267 reject_low 5 ALIGNMENT 41 YS2-11d18.q1k vc_1 267 227 2472 2512 C 41 100.00 267 reject_low 2 ALIGNMENT 41 YS2-11d18.q1k vc_2 267 227 2105 2145 C 41 100.00 267 reject_low 3 ALIGNMENT 0 YS2-11d18.q1k vc_3 226 62 2513 2512 C 165 0.00 267 reject_low 4 ALIGNMENT 38 YS2-11d18.q1k vc_7 230 267 13525 13562 F 38 100.00 267 reject_low 7 ALIGNMENT 0 YS2-11d18.q1k vc_1 226 62 2513 2512 C 165 0.00 267 reject_low 2 ALIGNMENT 41 YS2-11d18.q1k vc_3 267 227 2472 2512 C 41 100.00 267 reject_low 4 ALIGNMENT 41 YS2-11d19.q1k vc_4 637 677 5831 5871 F 41 100.00 677 reject_low 4 ALIGNMENT 36 YS2-11d19.q1k vc_5 674 639 1 36 C 36 100.00 677 reject_low 7 ALIGNMENT 0 YS2-11d19.q1k vc_3 636 62 2513 2512 C 575 0.00 677 reject_low 3 ALIGNMENT 594 YS2-11d19.q1k chr12 32 637 643108 643713 F 606 100.00 677 accept_chi 0 ALIGNMENT 39 YS2-11d19.q1k vc_5 677 639 5025 5063 C 39 100.00 677 reject_low 5 ALIGNMENT 0 YS2-11d19.q1k vc_5 638 62 5064 5063 C 577 0.00 677 reject_low 5 ALIGNMENT 41 YS2-11d19.q1k vc_1 677 637 2472 2512 C 41 100.00 677 reject_low 2 ALIGNMENT 41 YS2-11d19.q1k vc_3 677 637 2472 2512 C 41 100.00 677 reject_low 3 ALIGNMENT 579 YS2-11d19.p1k chr12 629 33 643108 643704 C 597 99.66 648 accept_chi 1 ALIGNMENT 0 YS2-11d19.p1k chr12 648 630 643109 643108 C 19 0.00 648 accept_chi 1 ALIGNMENT 0 YS2-11d19.q1k vc_1 636 62 2513 2512 C 575 0.00 677 reject_low 2 ALIGNMENT 0 YS2-11d19.q1k vc_5 638 62 37 36 C 577 0.00 677 reject_low 7 ALIGNMENT 0 YS2-11d19.q1k vc_4 62 636 5831 5830 F 575 0.00 677 reject_low 4 ALIGNMENT 0 YS2-11d19.q1k vc_7 62 639 13525 13524 F 578 0.00 677 reject_low 6 ALIGNMENT 38 YS2-11d19.q1k vc_7 640 677 13525 13562 F 38 100.00 677 reject_low 6 ALIGNMENT 0 YS2-11d19.q1k chr12 638 677 643713 643712 F 40 0.00 677 accept_chi 0 ALIGNMENT 0 YS2-11d20.p1k chr12 826 241 489755 489754 C 586 0.00 1213 reject_low 2 ALIGNMENT 0 YS2-11d20.q1k chr12 130 762 472582 472581 F 633 0.00 1146 reject_low 5 ALIGNMENT 186 YS2-11d20.p1k chr12 240 33 489754 489961 C 208 97.12 1213 reject_low 2 ALIGNMENT 87 YS2-11d20.q1k chr12 39 129 468839 468930 F 91 98.90 1146 reject_low 4 ALIGNMENT 88 YS2-11d20.q1k chr12 881 1022 451419 451555 F 142 90.85 1146 reject_low 3 ALIGNMENT 828 YS2-11d20.q1k chr12 39 1022 459702 460692 F 984 96.65 1146 accept 0 ALIGNMENT 0 YS2-11d20.p1k chr12 826 596 451420 451419 C 231 0.00 1213 reject_low 1 ALIGNMENT 0 YS2-11d20.q1k chr12 130 762 482162 482161 F 633 0.00 1146 reject_low 6 ALIGNMENT 87 YS2-11d20.q1k chr12 39 129 485723 485814 F 91 98.90 1146 reject_low 7 ALIGNMENT 0 YS2-11d20.q1k chr12 145 762 489481 489480 F 618 0.00 1146 reject_low 2 ALIGNMENT 471 YS2-11d20.p1k chr12 595 33 451419 451993 C 563 96.09 1213 reject_low 1 ALIGNMENT 96 YS2-11d20.q1k chr12 39 144 489375 489481 F 106 97.17 1146 reject_low 2 ALIGNMENT 87 YS2-11d20.q1k chr12 39 129 482071 482162 F 91 98.90 1146 reject_low 6 ALIGNMENT 0 YS2-11d20.q1k chr12 130 762 485814 485813 F 633 0.00 1146 reject_low 7 ALIGNMENT 87 YS2-11d20.q1k chr12 39 129 472491 472582 F 91 98.90 1146 reject_low 5 ALIGNMENT 0 YS2-11d20.q1k chr12 130 762 468930 468929 F 633 0.00 1146 reject_low 4 ALIGNMENT 0 YS2-11d20.q1k chr12 62 880 451419 451418 F 819 0.00 1146 reject_low 3 ALIGNMENT 863 YS2-11d20.p1k chr12 1127 33 460006 461130 C 1095 94.79 1213 accept 0 ALIGNMENT 0 YS2-11d21.q1k vc_1 422 62 2512 2511 C 361 0.00 462 reject_low 2 ALIGNMENT 38 YS2-11d21.q1k vc_7 425 462 13525 13562 F 38 100.00 462 reject_low 7 ALIGNMENT 0 YS2-11d21.p1k chr05 419 436 221051 221050 F 18 0.00 436 accept_chi 0 ALIGNMENT 0 YS2-11d21.q1k chr05 462 423 220667 220666 C 40 0.00 462 accept_chi 1 ALIGNMENT 40 YS2-11d21.q1k vc_3 462 423 2472 2511 C 40 100.00 462 reject_low 4 ALIGNMENT 0 YS2-11d21.q1k vc_4 62 422 5832 5831 F 361 0.00 462 reject_low 5 ALIGNMENT 0 YS2-11d21.q1k vc_5 423 62 5064 5063 C 362 0.00 462 reject_low 6 ALIGNMENT 40 YS2-11d21.q1k vc_2 462 423 2105 2144 C 40 100.00 462 reject_low 3 ALIGNMENT 0 YS2-11d21.q1k vc_7 62 424 13525 13524 F 363 0.00 462 reject_low 7 ALIGNMENT 40 YS2-11d21.q1k vc_1 462 423 2472 2511 C 40 100.00 462 reject_low 2 ALIGNMENT 365 YS2-11d21.p1k chr05 33 418 220666 221051 F 386 99.74 436 accept_chi 0 ALIGNMENT 0 YS2-11d21.q1k vc_5 423 62 37 36 C 362 0.00 462 reject_low 8 ALIGNMENT 0 YS2-11d21.q1k vc_3 422 62 2512 2511 C 361 0.00 462 reject_low 4 ALIGNMENT 365 YS2-11d21.q1k chr05 422 37 220666 221051 C 386 99.74 462 accept_chi 1 ALIGNMENT 36 YS2-11d21.q1k vc_5 459 424 1 36 C 36 100.00 462 reject_low 8 ALIGNMENT 39 YS2-11d21.q1k vc_5 462 424 5025 5063 C 39 100.00 462 reject_low 6 ALIGNMENT 40 YS2-11d21.q1k vc_4 423 462 5832 5871 F 40 100.00 462 reject_low 5 ALIGNMENT 0 YS2-11d21.q1k vc_2 422 62 2145 2144 C 361 0.00 462 reject_low 3 ALIGNMENT 928 YS2-11d22.p1k chr15 31 1105 383220 384302 F 1075 96.37 1182 accept 0 ALIGNMENT 889 YS2-11d22.q1k chr15 1093 37 387893 388942 C 1057 96.12 1096 accept 0 ALIGNMENT 0 YS2-11d23.p1k chr01 62 147 183344 183343 F 86 0.00 1164 reject_low 37 ALIGNMENT 107 YS2-11d23.q1k chr15 898 1016 970280 970399 F 119 99.16 1104 reject_low 25 ALIGNMENT 0 YS2-11d23.p1k chr08 146 62 91887 91886 C 85 0.00 1164 reject_low 52 ALIGNMENT 105 YS2-11d23.p1k chr05 30 148 431700 431818 F 119 98.32 1164 reject_low 23 ALIGNMENT 0 YS2-11d23.q1k chr03 62 914 151534 151533 F 853 0.00 1104 reject_low 72 ALIGNMENT 0 YS2-11d23.q1k chr10 931 902 537949 538225 C 30 0.00 1104 reject_low 77 ALIGNMENT 0 YS2-11d23.p1k chr12 62 146 656621 656620 F 85 0.00 1164 reject_low 47 ALIGNMENT 0 YS2-11d23.p1k chr01 147 62 160363 160362 C 86 0.00 1164 reject_low 38 ALIGNMENT 0 YS2-11d23.p1k chr10 971 249 354784 354783 C 723 0.00 1164 reject_low 63 ALIGNMENT 0 YS2-11d23.p1k chr01 147 62 165951 165950 C 86 0.00 1164 reject_low 22 ALIGNMENT 0 YS2-11d23.q1k chr10 799 62 538326 538325 C 738 0.00 1104 reject_low 77 ALIGNMENT 27 YS2-11d23.q1k chr10 980 932 537900 537948 C 49 87.76 1104 reject_low 77 ALIGNMENT 41 YS2-11d23.q1k chr09 994 899 197390 197486 C 96 83.33 1104 reject_low 58 ALIGNMENT 0 YS2-11d23.q1k chr05 898 62 135941 135940 C 837 0.00 1104 reject_low 2 ALIGNMENT 108 YS2-11d23.p1k chr15 30 148 704278 704396 F 119 99.16 1164 reject_low 21 ALIGNMENT 29 YS2-11d23.q1k chr01 901 826 189629 189703 C 76 82.89 1104 reject_low 37 ALIGNMENT 70 YS2-11d23.q1k chr01 787 900 160249 160362 F 114 90.35 1104 reject_low 22 ALIGNMENT 48 YS2-11d23.p1k chr07 147 248 811661 811760 F 102 85.29 1164 reject_low 43 ALIGNMENT 0 YS2-11d23.q1k chr01 899 62 160576 160575 C 838 0.00 1104 reject_low 11 ALIGNMENT 105 YS2-11d23.q1k chr04 1016 900 987360 987477 C 117 99.15 1104 reject_low 28 ALIGNMENT 0 YS2-11d23.p1k chr12 62 146 941398 941397 F 85 0.00 1164 reject_low 64 ALIGNMENT 0 YS2-11d23.p1k chr07 971 149 817080 817079 C 823 0.00 1164 reject_low 4 ALIGNMENT 25 YS2-11d23.p1k chr10 67 115 537900 537948 F 49 85.71 1164 reject_low 76 ALIGNMENT 0 YS2-11d23.p1k chr09 145 62 197264 197263 C 84 0.00 1164 reject_low 41 ALIGNMENT 33 YS2-11d23.q1k chr06 899 843 137851 137907 C 57 89.47 1104 reject_low 75 ALIGNMENT 0 YS2-11d23.q1k chr15 62 897 970280 970279 F 836 0.00 1104 reject_low 25 ALIGNMENT 0 YS2-11d23.p1k chr12 971 149 656413 656412 C 823 0.00 1164 reject_low 18 ALIGNMENT 51 YS2-11d23.p1k chr08 252 147 91782 91886 C 106 84.91 1164 reject_low 52 ALIGNMENT 108 YS2-11d23.p1k chr12 148 30 941189 941307 C 119 99.16 1164 reject_low 19 ALIGNMENT 0 YS2-11d23.p1k chr06 206 971 137907 137906 F 766 0.00 1164 reject_low 44 ALIGNMENT 110 YS2-11d23.p1k chr05 30 149 135821 135940 F 120 99.17 1164 reject_low 2 ALIGNMENT 0 YS2-11d23.q1k chr01 788 62 183457 183456 C 727 0.00 1104 reject_low 51 ALIGNMENT 0 YS2-11d23.p1k chr05 971 249 135632 135631 C 723 0.00 1164 reject_low 54 ALIGNMENT 0 YS2-11d23.q1k chr06 62 899 143535 143534 F 838 0.00 1104 reject_low 30 ALIGNMENT 0 YS2-11d23.q1k chr04 799 62 1352943 1352942 C 738 0.00 1104 reject_low 66 ALIGNMENT 741 YS2-11d23.q1k chr03 900 36 151725 152588 C 865 96.99 1104 accept_chi 1 ALIGNMENT 0 YS2-11d23.p1k chr10 149 971 355091 355090 F 823 0.00 1164 reject_low 24 ALIGNMENT 0 YS2-11d23.q1k chr06 799 62 143844 143843 C 738 0.00 1104 reject_low 40 ALIGNMENT 56 YS2-11d23.q1k chr04 797 901 987164 987268 F 105 87.62 1104 reject_low 50 ALIGNMENT 99 YS2-11d23.q1k chr01 1016 900 160458 160575 C 117 97.44 1104 reject_low 11 ALIGNMENT 0 YS2-11d23.p1k chr04 62 146 1352843 1352842 F 85 0.00 1164 reject_low 53 ALIGNMENT 0 YS2-11d23.q1k chr04 899 62 987478 987477 C 838 0.00 1104 reject_low 28 ALIGNMENT 0 YS2-11d23.p1k chr01 971 150 189420 189419 C 822 0.00 1164 reject_low 12 ALIGNMENT 0 YS2-11d23.q1k chr04 62 899 1352634 1352633 F 838 0.00 1104 reject_low 29 ALIGNMENT 105 YS2-11d23.q1k chr12 1016 900 976468 976585 C 117 99.15 1104 reject_low 6 ALIGNMENT 66 YS2-11d23.p1k chr12 147 246 656621 656720 F 100 90.00 1164 reject_low 47 ALIGNMENT 0 YS2-11d23.p1k chr14 971 249 562058 562057 C 723 0.00 1164 reject_low 65 ALIGNMENT 0 YS2-11d23.q1k chr07 62 899 811452 811451 F 838 0.00 1104 reject_low 4 ALIGNMENT 102 YS2-11d23.p1k chr01 30 148 160457 160575 F 119 97.48 1164 reject_low 11 ALIGNMENT 0 YS2-11d23.q1k chr01 62 786 160249 160248 F 725 0.00 1104 reject_low 22 ALIGNMENT 0 YS2-11d23.q1k chr09 898 62 197487 197486 C 837 0.00 1104 reject_low 58 ALIGNMENT 0 YS2-11d23.q1k chr07 62 899 817079 817078 F 838 0.00 1104 reject_low 31 ALIGNMENT 51 YS2-11d23.p1k chr12 247 147 976278 976376 C 101 86.14 1164 reject_low 57 ALIGNMENT 26 YS2-11d23.p1k chr03 136 30 151530 151636 C 107 77.57 1164 reject_low 70 ALIGNMENT 102 YS2-11d23.q1k chr05 900 1016 62142 62259 F 117 98.29 1104 reject_low 35 ALIGNMENT 105 YS2-11d23.q1k chr04 900 1016 1352634 1352751 F 117 99.15 1104 reject_low 29 ALIGNMENT 0 YS2-11d23.q1k chr14 62 794 726633 726632 F 733 0.00 1104 reject_low 59 ALIGNMENT 108 YS2-11d23.p1k chr07 148 30 811452 811570 C 119 99.16 1164 reject_low 16 ALIGNMENT 94 YS2-11d23.p1k chr01 149 44 189419 189524 C 106 98.11 1164 reject_low 12 ALIGNMENT 0 YS2-11d23.q1k chr12 899 62 976586 976585 C 838 0.00 1104 reject_low 6 ALIGNMENT 0 YS2-11d23.q1k chr01 62 786 165837 165836 F 725 0.00 1104 reject_low 45 ALIGNMENT 0 YS2-11d23.p1k chr01 971 151 183135 183134 C 821 0.00 1164 reject_low 60 ALIGNMENT 92 YS2-11d23.q1k chr01 899 1003 189419 189524 F 105 98.10 1104 reject_low 36 ALIGNMENT 0 YS2-11d23.p1k chr12 249 971 941497 941496 F 723 0.00 1164 reject_low 64 ALIGNMENT 0 YS2-11d23.p1k chr13 971 149 768548 768547 C 823 0.00 1164 reject_low 20 ALIGNMENT 0 YS2-11d23.p1k chr08 971 253 91783 91782 C 719 0.00 1164 reject_low 52 ALIGNMENT 0 YS2-11d23.p1k chr07 249 971 811760 811759 F 723 0.00 1164 reject_low 43 ALIGNMENT 0 YS2-11d23.p1k chr07 971 149 811453 811452 C 823 0.00 1164 reject_low 16 ALIGNMENT 56 YS2-11d23.p1k chr14 253 147 726633 726737 C 107 86.92 1164 reject_low 49 ALIGNMENT 0 YS2-11d23.p1k chr05 150 971 135940 135939 F 822 0.00 1164 reject_low 2 ALIGNMENT 108 YS2-11d23.p1k chr14 30 148 726828 726946 F 119 99.16 1164 reject_low 9 ALIGNMENT 108 YS2-11d23.p1k chr06 148 30 143535 143653 C 119 99.16 1164 reject_low 3 ALIGNMENT 0 YS2-11d23.p1k chr09 150 971 197486 197485 F 822 0.00 1164 reject_low 48 ALIGNMENT 70 YS2-11d23.q1k chr01 787 900 165837 165950 F 114 90.35 1104 reject_low 45 ALIGNMENT 0 YS2-11d23.p1k chr01 62 146 189629 189628 F 85 0.00 1164 reject_low 42 ALIGNMENT 0 YS2-11d23.q1k chr14 62 899 519164 519163 F 838 0.00 1104 reject_low 34 ALIGNMENT 105 YS2-11d23.q1k chr14 1016 900 726829 726946 C 117 99.15 1104 reject_low 9 ALIGNMENT 0 YS2-11d23.q1k chr06 62 899 137908 137907 F 838 0.00 1104 reject_low 3 ALIGNMENT 0 YS2-11d23.q1k chr03 62 899 84068 84067 F 838 0.00 1104 reject_low 27 ALIGNMENT 43 YS2-11d23.q1k chr08 796 901 91782 91886 F 106 83.02 1104 reject_low 71 ALIGNMENT 0 YS2-11d23.p1k chr13 249 971 768855 768854 F 723 0.00 1164 reject_low 55 ALIGNMENT 0 YS2-11d23.p1k chr06 249 971 143843 143842 F 723 0.00 1164 reject_low 61 ALIGNMENT 105 YS2-11d23.q1k chr13 1016 900 168564 168681 C 117 99.15 1104 reject_low 7 ALIGNMENT 0 YS2-11d23.p1k chr01 971 262 165838 165837 C 710 0.00 1164 reject_low 22 ALIGNMENT 45 YS2-11d23.p1k chr12 147 248 941398 941497 F 102 84.31 1164 reject_low 64 ALIGNMENT 108 YS2-11d23.p1k chr13 30 148 168563 168681 F 119 99.16 1164 reject_low 7 ALIGNMENT 51 YS2-11d23.q1k chr14 795 901 726633 726737 F 107 85.98 1104 reject_low 59 ALIGNMENT 0 YS2-11d23.p1k chr14 146 62 562157 562156 C 85 0.00 1164 reject_low 65 ALIGNMENT 0 YS2-11d23.p1k chr10 971 149 538018 538017 C 823 0.00 1164 reject_low 17 ALIGNMENT 105 YS2-11d23.q1k chr06 900 1016 137908 138025 F 117 99.15 1104 reject_low 3 ALIGNMENT 108 YS2-11d23.p1k chr08 30 148 91977 92095 F 119 99.16 1164 reject_low 5 ALIGNMENT 27 YS2-11d23.q1k chr03 915 1016 151534 151635 F 102 78.43 1104 reject_low 72 ALIGNMENT 45 YS2-11d23.q1k chr12 801 901 976278 976376 F 101 85.15 1104 reject_low 69 ALIGNMENT 52 YS2-11d23.p1k chr04 147 248 1352843 1352942 F 102 86.27 1164 reject_low 53 ALIGNMENT 105 YS2-11d23.q1k chr10 900 1016 538017 538134 F 117 99.15 1104 reject_low 33 ALIGNMENT 0 YS2-11d23.q1k chr08 62 795 91782 91781 F 734 0.00 1104 reject_low 71 ALIGNMENT 0 YS2-11d23.p1k chr01 149 971 160575 160574 F 823 0.00 1164 reject_low 11 ALIGNMENT 0 YS2-11d23.p1k chr14 149 971 562365 562364 F 823 0.00 1164 reject_low 8 ALIGNMENT 84 YS2-11d23.p1k chr01 261 148 160249 160362 C 114 92.98 1164 reject_low 38 ALIGNMENT 37 YS2-11d23.q1k chr06 901 787 138117 138229 C 115 80.87 1104 reject_low 44 ALIGNMENT 0 YS2-11d23.p1k chr06 62 148 137851 137850 F 87 0.00 1164 reject_low 44 ALIGNMENT 35 YS2-11d23.p1k chr01 150 78 183134 183206 C 73 84.93 1164 reject_low 60 ALIGNMENT 0 YS2-11d23.p1k chr08 149 971 92095 92094 F 823 0.00 1164 reject_low 5 ALIGNMENT 0 YS2-11d23.q1k chr10 62 899 538017 538016 F 838 0.00 1104 reject_low 33 ALIGNMENT 0 YS2-11d23.p1k chr12 971 149 941190 941189 C 823 0.00 1164 reject_low 19 ALIGNMENT 0 YS2-11d23.p1k chr06 971 149 143536 143535 C 823 0.00 1164 reject_low 3 ALIGNMENT 0 YS2-11d23.p1k chr07 249 971 817387 817386 F 723 0.00 1164 reject_low 62 ALIGNMENT 108 YS2-11d23.p1k chr04 148 30 1352634 1352752 C 119 99.16 1164 reject_low 14 ALIGNMENT 45 YS2-11d23.p1k chr10 147 248 538226 538325 F 102 84.31 1164 reject_low 76 ALIGNMENT 105 YS2-11d23.p1k chr10 30 148 354973 355091 F 119 98.32 1164 reject_low 24 ALIGNMENT 0 YS2-11d23.p1k chr03 62 147 151725 151724 F 86 0.00 1164 accept_chi 0 ALIGNMENT 0 YS2-11d23.q1k chr14 797 62 519477 519476 C 736 0.00 1104 reject_low 56 ALIGNMENT 0 YS2-11d23.q1k chr07 799 62 811761 811760 C 738 0.00 1104 reject_low 73 ALIGNMENT 0 YS2-11d23.q1k chr01 825 62 189704 189703 C 764 0.00 1104 reject_low 37 ALIGNMENT 0 YS2-11d23.q1k chr14 899 62 726947 726946 C 838 0.00 1104 reject_low 9 ALIGNMENT 0 YS2-11d23.p1k chr01 273 971 189752 189751 F 699 0.00 1164 reject_low 42 ALIGNMENT 39 YS2-11d23.p1k chr06 149 205 137851 137907 F 57 91.23 1164 reject_low 44 ALIGNMENT 104 YS2-11d23.p1k chr01 30 153 166045 166168 F 124 96.77 1164 reject_low 10 ALIGNMENT 0 YS2-11d23.q1k chr06 842 62 137908 137907 C 781 0.00 1104 reject_low 75 ALIGNMENT 0 YS2-11d23.p1k chr05 149 971 431818 431817 F 823 0.00 1164 reject_low 23 ALIGNMENT 33 YS2-11d23.q1k chr01 898 969 183134 183206 F 72 84.72 1104 reject_low 12 ALIGNMENT 46 YS2-11d23.q1k chr04 901 800 1352843 1352942 C 102 85.29 1104 reject_low 66 ALIGNMENT 0 YS2-11d23.p1k chr07 62 146 811661 811660 F 85 0.00 1164 reject_low 43 ALIGNMENT 78 YS2-11d23.p1k chr09 261 146 197146 197263 C 116 91.38 1164 reject_low 41 ALIGNMENT 0 YS2-11d23.p1k chr15 149 971 704396 704395 F 823 0.00 1164 reject_low 21 ALIGNMENT 48 YS2-11d23.p1k chr06 147 261 138117 138229 F 115 83.48 1164 reject_low 40 ALIGNMENT 0 YS2-11d23.p1k chr06 62 146 138117 138116 F 85 0.00 1164 reject_low 40 ALIGNMENT 105 YS2-11d23.q1k chr08 1016 900 389395 389512 C 117 99.15 1104 reject_low 32 ALIGNMENT 0 YS2-11d23.q1k chr14 899 62 562366 562365 C 838 0.00 1104 reject_low 8 ALIGNMENT 0 YS2-11d23.q1k chr08 899 62 92096 92095 C 838 0.00 1104 reject_low 5 ALIGNMENT 105 YS2-11d23.q1k chr14 900 1016 519164 519281 F 117 99.15 1104 reject_low 34 ALIGNMENT 0 YS2-11d23.p1k chr03 971 137 151531 151530 C 835 0.00 1164 reject_low 70 ALIGNMENT 0 YS2-11d23.q1k chr04 62 796 987164 987163 F 735 0.00 1104 reject_low 50 ALIGNMENT 34 YS2-11d23.q1k chr14 800 901 562057 562156 F 102 81.37 1104 reject_low 74 ALIGNMENT 0 YS2-11d23.p1k chr10 116 146 537949 538225 F 31 0.00 1164 reject_low 76 ALIGNMENT 108 YS2-11d23.p1k chr06 148 30 137908 138026 C 119 99.16 1164 reject_low 15 ALIGNMENT 0 YS2-11d23.p1k chr13 149 971 168681 168680 F 823 0.00 1164 reject_low 7 ALIGNMENT 46 YS2-11d23.q1k chr15 901 800 970491 970590 C 102 85.29 1104 reject_low 68 ALIGNMENT 37 YS2-11d23.q1k chr06 901 800 143744 143843 C 102 82.35 1104 reject_low 40 ALIGNMENT 0 YS2-11d23.q1k chr01 62 898 189419 189418 F 837 0.00 1104 reject_low 36 ALIGNMENT 66 YS2-11d23.q1k chr09 787 902 197146 197263 F 116 89.66 1104 reject_low 46 ALIGNMENT 63 YS2-11d23.p1k chr01 148 259 183344 183456 F 112 87.50 1164 reject_low 37 ALIGNMENT 0 YS2-11d23.q1k chr15 799 62 970591 970590 C 738 0.00 1104 reject_low 68 ALIGNMENT 0 YS2-11d23.q1k chr13 899 62 168682 168681 C 838 0.00 1104 reject_low 7 ALIGNMENT 105 YS2-11d23.q1k chr08 1016 900 91978 92095 C 117 99.15 1104 reject_low 5 ALIGNMENT 108 YS2-11d23.p1k chr12 30 148 976467 976585 F 119 99.16 1164 reject_low 6 ALIGNMENT 0 YS2-11d23.q1k chr01 894 62 166169 166168 C 833 0.00 1104 reject_low 10 ALIGNMENT 110 YS2-11d23.p1k chr09 149 30 246216 246335 C 120 99.17 1164 reject_low 13 ALIGNMENT 44 YS2-11d23.p1k chr09 53 149 197390 197486 F 97 83.51 1164 reject_low 48 ALIGNMENT 52 YS2-11d23.p1k chr05 248 147 135631 135730 C 102 86.27 1164 reject_low 54 ALIGNMENT 0 YS2-11d23.p1k chr06 262 971 138229 138228 F 710 0.00 1164 reject_low 40 ALIGNMENT 0 YS2-11d23.p1k chr01 971 262 160250 160249 C 710 0.00 1164 reject_low 38 ALIGNMENT 0 YS2-11d23.q1k chr09 62 898 246216 246215 F 837 0.00 1104 reject_low 26 ALIGNMENT 0 YS2-11d23.q1k chr05 62 799 135631 135630 F 738 0.00 1104 reject_low 67 ALIGNMENT 0 YS2-11d23.p1k chr12 149 971 976585 976584 F 823 0.00 1164 reject_low 6 ALIGNMENT 0 YS2-11d23.p1k chr06 62 146 143744 143743 F 85 0.00 1164 reject_low 61 ALIGNMENT 0 YS2-11d23.q1k chr14 62 799 562057 562056 F 738 0.00 1104 reject_low 74 ALIGNMENT 77 YS2-11d23.q1k chr03 900 985 84294 84380 F 86 98.84 1104 reject_low 39 ALIGNMENT 45 YS2-11d23.p1k chr10 248 147 354783 354882 C 102 84.31 1164 reject_low 63 ALIGNMENT 53 YS2-11d23.q1k chr14 902 798 519372 519476 C 105 86.67 1104 reject_low 56 ALIGNMENT 0 YS2-11d23.q1k chr01 62 897 183134 183133 F 836 0.00 1104 reject_low 12 ALIGNMENT 34 YS2-11d23.q1k chr07 901 800 817288 817387 C 102 81.37 1104 reject_low 43 ALIGNMENT 0 YS2-11d23.q1k chr05 62 899 62142 62141 F 838 0.00 1104 reject_low 35 ALIGNMENT 108 YS2-11d23.p1k chr13 148 30 768547 768665 C 119 99.16 1164 reject_low 20 ALIGNMENT 52 YS2-11d23.p1k chr13 147 248 768756 768855 F 102 86.27 1164 reject_low 55 ALIGNMENT 45 YS2-11d23.p1k chr07 147 248 817288 817387 F 102 84.31 1164 reject_low 62 ALIGNMENT 0 YS2-11d23.p1k chr10 146 62 354883 354882 C 85 0.00 1164 reject_low 63 ALIGNMENT 105 YS2-11d23.q1k chr07 900 1016 817079 817196 F 117 99.15 1104 reject_low 31 ALIGNMENT 0 YS2-11d23.p1k chr04 971 149 1352635 1352634 C 823 0.00 1164 reject_low 14 ALIGNMENT 0 YS2-11d23.p1k chr14 149 971 726946 726945 F 823 0.00 1164 reject_low 9 ALIGNMENT 0 YS2-11d23.p1k chr12 247 971 656720 656719 F 725 0.00 1164 reject_low 47 ALIGNMENT 0 YS2-11d23.p1k chr01 260 971 183456 183455 F 712 0.00 1164 reject_low 37 ALIGNMENT 108 YS2-11d23.p1k chr07 148 30 817079 817197 C 119 99.16 1164 reject_low 4 ALIGNMENT 751 YS2-11d23.p1k chr03 148 1011 151725 152588 F 864 97.34 1164 accept_chi 0 ALIGNMENT 0 YS2-11d23.p1k chr09 971 262 197147 197146 C 710 0.00 1164 reject_low 41 ALIGNMENT 0 YS2-11d23.p1k chr14 146 62 726738 726737 C 85 0.00 1164 reject_low 49 ALIGNMENT 0 YS2-11d23.p1k chr01 154 971 166168 166167 F 818 0.00 1164 reject_low 10 ALIGNMENT 0 YS2-11d23.q1k chr03 62 899 84294 84293 F 838 0.00 1104 reject_low 39 ALIGNMENT 0 YS2-11d23.q1k chr08 899 62 389513 389512 C 838 0.00 1104 reject_low 32 ALIGNMENT 0 YS2-11d23.p1k chr14 971 254 726634 726633 C 718 0.00 1164 reject_low 49 ALIGNMENT 105 YS2-11d23.q1k chr03 900 1016 84068 84185 F 117 99.15 1104 reject_low 27 ALIGNMENT 0 YS2-11d23.q1k chr06 786 62 138230 138229 C 725 0.00 1104 reject_low 44 ALIGNMENT 53 YS2-11d23.p1k chr01 147 272 189629 189752 F 126 83.33 1164 reject_low 42 ALIGNMENT 48 YS2-11d23.p1k chr06 147 248 143744 143843 F 102 85.29 1164 reject_low 61 ALIGNMENT 0 YS2-11d23.p1k chr01 77 62 183207 183206 C 16 0.00 1164 reject_low 60 ALIGNMENT 0 YS2-11d23.p1k chr09 971 150 246217 246216 C 822 0.00 1164 reject_low 13 ALIGNMENT 46 YS2-11d23.q1k chr05 800 901 135631 135730 F 102 85.29 1104 reject_low 67 ALIGNMENT 101 YS2-11d23.q1k chr01 1016 895 166046 166168 C 122 96.72 1104 reject_low 10 ALIGNMENT 0 YS2-11d23.p1k chr12 971 248 976279 976278 C 724 0.00 1164 reject_low 57 ALIGNMENT 0 YS2-11d23.p1k chr07 62 146 817288 817287 F 85 0.00 1164 reject_low 62 ALIGNMENT 0 YS2-11d23.p1k chr10 249 971 538325 538324 F 723 0.00 1164 reject_low 76 ALIGNMENT 108 YS2-11d23.p1k chr14 30 148 562247 562365 F 119 99.16 1164 reject_low 8 ALIGNMENT 105 YS2-11d23.q1k chr14 1016 900 562248 562365 C 117 99.15 1104 reject_low 8 ALIGNMENT 0 YS2-11d23.q1k chr09 62 786 197146 197145 F 725 0.00 1104 reject_low 46 ALIGNMENT 0 YS2-11d23.p1k chr13 62 146 768756 768755 F 85 0.00 1164 reject_low 55 ALIGNMENT 0 YS2-11d23.p1k chr06 971 149 137909 137908 C 823 0.00 1164 reject_low 15 ALIGNMENT 34 YS2-11d23.q1k chr10 901 800 538226 538325 C 102 81.37 1104 reject_low 77 ALIGNMENT 108 YS2-11d23.p1k chr10 148 30 538017 538135 C 119 99.16 1164 reject_low 17 ALIGNMENT 106 YS2-11d23.q1k chr09 899 1016 246216 246334 F 118 99.15 1104 reject_low 26 ALIGNMENT 0 YS2-11d23.p1k chr12 146 62 976377 976376 C 85 0.00 1164 reject_low 57 ALIGNMENT 45 YS2-11d23.p1k chr14 248 147 562057 562156 C 102 84.31 1164 reject_low 65 ALIGNMENT 37 YS2-11d23.q1k chr07 901 800 811661 811760 C 102 82.35 1104 reject_low 73 ALIGNMENT 0 YS2-11d23.q1k chr12 62 800 976278 976277 F 739 0.00 1104 reject_low 69 ALIGNMENT 0 YS2-11d23.q1k chr07 799 62 817388 817387 C 738 0.00 1104 reject_low 43 ALIGNMENT 105 YS2-11d23.q1k chr06 900 1016 143535 143652 F 117 99.15 1104 reject_low 30 ALIGNMENT 0 YS2-11d23.p1k chr04 249 971 1352942 1352941 F 723 0.00 1164 reject_low 53 ALIGNMENT 84 YS2-11d23.p1k chr01 261 148 165837 165950 C 114 92.98 1164 reject_low 22 ALIGNMENT 49 YS2-11d23.q1k chr01 900 789 183344 183456 C 112 83.93 1104 reject_low 51 ALIGNMENT 0 YS2-11d23.p1k chr05 146 62 135731 135730 C 85 0.00 1164 reject_low 54 ALIGNMENT 105 YS2-11d23.q1k chr07 900 1016 811452 811569 F 117 99.15 1104 reject_low 4 ALIGNMENT 106 YS2-11d23.q1k chr05 1016 899 135822 135940 C 118 99.15 1104 reject_low 2 ALIGNMENT 108 YS2-11d23.p1k chr12 148 30 656412 656530 C 119 99.16 1164 reject_low 18 ALIGNMENT 996 YS2-11d24.p1k chr02 34 1147 119327 120435 F 1114 98.29 1156 accept 0 ALIGNMENT 843 YS2-11d24.q1k chr02 998 28 123737 124696 C 971 97.43 1145 accept 0 ALIGNMENT 0 YS2-11e03.p1k chrm 502 425 12249 12248 C 78 0.00 502 reject_low 5 ALIGNMENT 0 YS2-11e03.p1k chrm 502 166 47412 47411 C 337 0.00 502 ambiguous 8 ALIGNMENT 51 YS2-11e03.q1k chrm 192 116 34897 34976 C 77 90.91 536 ambiguous 23 ALIGNMENT 0 YS2-11e03.p1k chrm 502 433 2723 2722 C 70 0.00 502 ambiguous 39 ALIGNMENT 40 YS2-11e03.p1k chrm 55 119 50111 50176 F 65 87.69 502 reject_low 36 ALIGNMENT 0 YS2-11e03.p1k chrm 355 62 52383 52382 C 294 0.00 502 ambiguous 17 ALIGNMENT 49 YS2-11e03.p1k chrm 424 356 12248 12318 C 69 91.30 502 reject_low 5 ALIGNMENT 65 YS2-11e03.p1k chrm 419 342 9476 9553 C 78 96.15 502 reject_low 29 ALIGNMENT 49 YS2-11e03.p1k chrm 358 408 83048 83098 F 51 100.00 502 reject_low 37 ALIGNMENT 43 YS2-11e03.q1k chrm 163 116 46309 46356 C 48 97.92 536 reject_low 11 ALIGNMENT 0 YS2-11e03.q1k chrm 422 97 11550 11549 C 326 0.00 536 reject_low 7 ALIGNMENT 38 YS2-11e03.p1k chrm 55 103 76595 76644 F 49 93.88 502 reject_low 38 ALIGNMENT 0 YS2-11e03.q1k chrm 114 97 10789 10788 C 18 0.00 536 reject_low 30,31 ALIGNMENT 32 YS2-11e03.q1k chrm 264 312 82808 82857 F 49 89.80 536 ambiguous 1 ALIGNMENT 0 YS2-11e03.p1k chrm 502 459 75568 75567 C 44 0.00 502 ambiguous 2 ALIGNMENT 57 YS2-11e03.p1k chrm 359 450 69439 69532 F 92 90.22 502 reject_low 42 ALIGNMENT 48 YS2-11e03.p1k chrm 359 447 53823 53908 F 89 87.64 502 reject_low 35 ALIGNMENT 43 YS2-11e03.q1k chrm 466 418 76595 76644 C 49 97.96 536 reject_low 10,43 ALIGNMENT 0 YS2-11e03.p1k chrm 355 110 47525 52318 C 246 0.00 502 ambiguous 40 ALIGNMENT 51 YS2-11e03.p1k chrm 357 453 69047 69145 F 97 86.60 502 reject_low 24 ALIGNMENT 0 YS2-11e03.q1k chrm 536 163 53824 53823 C 374 0.00 536 reject_low 25 ALIGNMENT 0 YS2-11e03.p1k chrm 208 62 82858 82857 C 147 0.00 502 ambiguous 2 ALIGNMENT 44 YS2-11e03.p1k chrm 458 346 75567 75680 C 113 82.30 502 ambiguous 2 ALIGNMENT 0 YS2-11e03.q1k chrm 536 164 46310 46309 C 373 0.00 536 reject_low 11 ALIGNMENT 0 YS2-11e03.p1k chrm 419 502 80557 80556 F 84 0.00 502 reject_low 38 ALIGNMENT 0 YS2-11e03.p1k chrm 408 502 50154 50153 F 95 0.00 502 reject_low 25 ALIGNMENT 49 YS2-11e03.p1k chrm 109 40 52319 52388 C 70 90.00 502 ambiguous 40 ALIGNMENT 0 YS2-11e03.q1k chrm 313 536 82857 82856 F 224 0.00 536 ambiguous 1 ALIGNMENT 0 YS2-11e03.q1k chrm 536 467 69445 69444 C 70 0.00 536 reject_low 42 ALIGNMENT 0 YS2-11e03.q1k chrm 410 97 34992 34991 C 314 0.00 536 ambiguous 14 ALIGNMENT 0 YS2-11e03.q1k chrm 536 467 34288 34287 C 70 0.00 536 ambiguous 23 ALIGNMENT 49 YS2-11e03.q1k chrm 163 113 83048 83098 C 51 100.00 536 reject_low 38,43 ALIGNMENT 0 YS2-11e03.p1k chrm 142 352 69529 76583 F 211 0.00 502 reject_low 43 ALIGNMENT 0 YS2-11e03.p1k chrm 345 258 75681 82807 C 88 0.00 502 ambiguous 2 ALIGNMENT 45 YS2-11e03.q1k chrm 471 425 66822 66868 C 47 100.00 536 reject_low 35 ALIGNMENT 0 YS2-11e03.q1k chrm 536 168 2086 2085 C 369 0.00 536 reject_low 6 ALIGNMENT 0 YS2-11e03.q1k chrm 377 97 46404 46403 C 281 0.00 536 reject_low 3 ALIGNMENT 0 YS2-11e03.q1k chrm 536 467 76596 76595 C 70 0.00 536 reject_low 10,43 ALIGNMENT 0 YS2-11e03.q1k chrm 424 97 66869 66868 C 328 0.00 536 reject_low 35 ALIGNMENT 0 YS2-11e03.q1k chrm 115 97 34977 34976 C 19 0.00 536 ambiguous 23 ALIGNMENT 38 YS2-11e03.q1k vc_7 499 536 13525 13562 F 38 100.00 536 reject_vc 0 ALIGNMENT 39 YS2-11e03.q1k chrm 466 423 11506 11549 C 44 100.00 536 reject_low 7 ALIGNMENT 0 YS2-11e03.p1k chrm 502 407 47475 47474 C 96 0.00 502 ambiguous 40 ALIGNMENT 46 YS2-11e03.p1k chrm 408 358 82 132 C 51 98.04 502 ambiguous 41 ALIGNMENT 33 YS2-11e03.p1k chrm 98 55 12267 12310 C 44 93.18 502 reject_low 29 ALIGNMENT 0 YS2-11e03.p1k chrm 98 502 10788 10787 F 405 0.00 502 ambiguous 22 ALIGNMENT 37 YS2-11e03.q1k chrm 466 425 11047 11088 C 42 100.00 536 reject_low 28,34 ALIGNMENT 38 YS2-11e03.q1k chrm 159 115 10744 10788 C 45 97.78 536 reject_low 30,31 ALIGNMENT 37 YS2-11e03.p1k chrm 55 143 46315 46403 F 89 83.15 502 reject_low 25 ALIGNMENT 59 YS2-11e03.q1k chrm 168 107 76584 76645 C 62 98.39 536 reject_low 42 ALIGNMENT 0 YS2-11e03.p1k chrm 415 502 66877 66876 F 88 0.00 502 reject_low 10 ALIGNMENT 0 YS2-11e03.q1k chrm 112 97 83099 83098 C 16 0.00 536 reject_low 38,43 ALIGNMENT 0 YS2-11e03.p1k chrm 111 357 81459 83047 F 247 0.00 502 reject_low 37 ALIGNMENT 0 YS2-11e03.q1k chrm 401 193 34353 34896 C 209 0.00 536 ambiguous 23 ALIGNMENT 41 YS2-11e03.q1k chrm 165 116 3051 3101 C 50 96.00 536 ambiguous 27 ALIGNMENT 0 YS2-11e03.q1k chrm 536 472 66823 66822 C 65 0.00 536 reject_low 35 ALIGNMENT 0 YS2-11e03.p1k chrm 407 502 10788 10787 F 96 0.00 502 reject_low 34 ALIGNMENT 0 YS2-11e03.q1k chrm 536 467 10747 10746 C 70 0.00 536 ambiguous 16 ALIGNMENT 0 YS2-11e03.q1k chrm 365 166 2194 3050 C 200 0.00 536 ambiguous 27 ALIGNMENT 0 YS2-11e03.p1k chrm 111 502 34991 34990 F 392 0.00 502 reject_low 11 ALIGNMENT 38 YS2-11e03.p1k chrm 362 406 10744 10788 F 45 97.78 502 reject_low 34 ALIGNMENT 41 YS2-11e03.p1k chrm 46 98 52763 52815 F 53 92.45 502 reject_low 35 ALIGNMENT 0 YS2-11e03.q1k chrm 536 467 11048 11047 C 70 0.00 536 reject_low 28,34 ALIGNMENT 0 YS2-11e03.p1k chrm 406 502 34976 34975 F 97 0.00 502 reject_low 3 ALIGNMENT 0 YS2-11e03.q1k chrm 536 467 11507 11506 C 70 0.00 536 reject_low 7 ALIGNMENT 40 YS2-11e03.p1k chrm 50 96 66822 66868 F 47 95.74 502 reject_low 24,42 ALIGNMENT 0 YS2-11e03.q1k chrm 424 181 3102 11024 C 244 0.00 536 reject_low 4 ALIGNMENT 0 YS2-11e03.p1k chrm 502 420 9477 9476 C 83 0.00 502 reject_low 29 ALIGNMENT 45 YS2-11e03.q1k chrm 466 402 34287 34352 C 65 92.31 536 ambiguous 23 ALIGNMENT 38 YS2-11e03.p1k chrm 55 100 83054 83099 F 46 95.65 502 ambiguous 20 ALIGNMENT 0 YS2-11e03.p1k chrm 447 502 52855 52854 F 56 0.00 502 reject_low 36 ALIGNMENT 57 YS2-11e03.p1k chrm 341 483 11025 11170 F 143 85.31 502 reject_low 28 ALIGNMENT 0 YS2-11e03.p1k chrm 156 340 2194 11024 F 185 0.00 502 reject_low 28 ALIGNMENT 0 YS2-11e03.p1k chrm 502 409 83 82 C 94 0.00 502 ambiguous 41 ALIGNMENT 43 YS2-11e03.p1k chrm 364 414 66827 66877 F 51 96.08 502 reject_low 10 ALIGNMENT 0 YS2-11e03.q1k chrm 536 467 34936 34935 C 70 0.00 536 ambiguous 14 ALIGNMENT 0 YS2-11e03.q1k chrm 417 97 76645 76644 C 321 0.00 536 reject_low 10 ALIGNMENT 45 YS2-11e03.q1k chrm 167 116 2085 2136 C 52 96.15 536 reject_low 6 ALIGNMENT 47 YS2-11e03.q1k chrm 162 84 53823 53899 C 79 88.61 536 reject_low 25 ALIGNMENT 35 YS2-11e03.q1k chrm 466 424 10746 10788 C 43 97.67 536 ambiguous 16 ALIGNMENT 0 YS2-11e03.p1k chrm 156 361 2194 10743 F 206 0.00 502 reject_low 34 ALIGNMENT 0 YS2-11e03.p1k chrm 107 502 69105 69104 F 396 0.00 502 ambiguous 19 ALIGNMENT 0 YS2-11e03.q1k chrm 378 160 8325 10743 C 219 0.00 536 reject_low 31 ALIGNMENT 0 YS2-11e03.p1k chrm 415 502 76645 76644 F 88 0.00 502 reject_low 43 ALIGNMENT 0 YS2-11e03.p1k chrm 120 352 50177 52761 F 233 0.00 502 reject_low 36 ALIGNMENT 0 YS2-11e03.p1k chrm 341 99 9554 12266 C 243 0.00 502 reject_low 29 ALIGNMENT 32 YS2-11e03.p1k chrm 257 209 82808 82857 C 49 89.80 502 ambiguous 2 ALIGNMENT 42 YS2-11e03.q1k chrm 466 421 83054 83099 C 46 100.00 536 reject_low 33,37 ALIGNMENT 0 YS2-11e03.q1k chrm 536 486 2076 2075 C 51 0.00 536 ambiguous 27 ALIGNMENT 0 YS2-11e03.p1k chrm 139 341 80586 81380 F 203 0.00 502 reject_low 33 ALIGNMENT 0 YS2-11e03.p1k chrm 144 350 46404 50097 F 207 0.00 502 reject_low 25 ALIGNMENT 43 YS2-11e03.p1k chrm 358 405 46309 46356 F 48 97.92 502 reject_low 9 ALIGNMENT 0 YS2-11e03.q1k vc_7 97 498 13525 13524 F 402 0.00 536 reject_vc 0 ALIGNMENT 0 YS2-11e03.p1k chrm 156 502 2193 2192 F 347 0.00 502 reject_low 6 ALIGNMENT 44 YS2-11e03.p1k chrm 112 39 9473 9548 C 74 87.84 502 ambiguous 39,41 ALIGNMENT 44 YS2-11e03.p1k chrm 41 110 81390 81458 F 70 88.57 502 reject_low 37 ALIGNMENT 43 YS2-11e03.q1k chrm 157 107 66827 66877 C 51 96.08 536 reject_low 36 ALIGNMENT 0 YS2-11e03.q1k chrm 479 536 9544 9543 F 58 0.00 536 reject_low 29 ALIGNMENT 0 YS2-11e03.q1k chrm 424 97 11089 11088 C 328 0.00 536 reject_low 34 ALIGNMENT 0 YS2-11e03.q1k chrm 115 97 46357 46356 C 19 0.00 536 reject_low 11 ALIGNMENT 0 YS2-11e03.q1k chrm 424 187 11089 11476 C 238 0.00 536 reject_low 28 ALIGNMENT 0 YS2-11e03.p1k chrm 112 502 53883 53882 F 391 0.00 502 ambiguous 18 ALIGNMENT 0 YS2-11e03.p1k chrm 101 502 83099 83098 F 402 0.00 502 ambiguous 20 ALIGNMENT 44 YS2-11e03.q1k chrm 466 378 46315 46403 C 89 85.39 536 reject_low 3 ALIGNMENT 51 YS2-11e03.q1k chrm 162 104 9027 9086 C 59 96.61 536 reject_low 32 ALIGNMENT 0 YS2-11e03.p1k chrm 406 502 46356 46355 F 97 0.00 502 reject_low 9 ALIGNMENT 0 YS2-11e03.q1k chrm 409 97 53884 53883 C 313 0.00 536 reject_low 9 ALIGNMENT 0 YS2-11e03.q1k chrm 536 163 69440 69439 C 374 0.00 536 reject_low 24 ALIGNMENT 29 YS2-11e03.p1k chrm 165 55 47411 47516 C 111 82.88 502 ambiguous 8 ALIGNMENT 0 YS2-11e03.q1k chrm 97 408 9473 9472 F 312 0.00 536 reject_low 29 ALIGNMENT 0 YS2-11e03.q1k chrm 376 160 9124 10743 C 217 0.00 536 reject_low 30 ALIGNMENT 31 YS2-11e03.p1k chrm 55 97 10746 10788 F 43 93.02 502 ambiguous 22 ALIGNMENT 0 YS2-11e03.q1k chrm 115 97 3102 3101 C 19 0.00 536 ambiguous 27 ALIGNMENT 51 YS2-11e03.p1k chrm 55 141 69444 69528 F 87 89.66 502 reject_low 43 ALIGNMENT 0 YS2-11e03.p1k chrm 484 502 11170 11169 F 19 0.00 502 reject_low 28 ALIGNMENT 0 YS2-11e03.p1k chrm 502 110 75608 75607 C 393 0.00 502 ambiguous 13 ALIGNMENT 0 YS2-11e03.q1k chrm 536 467 46316 46315 C 70 0.00 536 reject_low 3 ALIGNMENT 56 YS2-11e03.q1k chrm 180 38 11025 11170 C 143 84.62 536 reject_low 4 ALIGNMENT 37 YS2-11e03.p1k chrm 55 110 34935 34991 F 56 89.29 502 reject_low 11 ALIGNMENT 0 YS2-11e03.q1k chrm 536 467 83055 83054 C 70 0.00 536 reject_low 33,37 ALIGNMENT 0 YS2-11e03.q1k chrm 423 97 10789 10788 C 327 0.00 536 ambiguous 16 ALIGNMENT 47 YS2-11e03.q1k chrm 483 377 9013 9123 C 107 84.11 536 reject_low 30 ALIGNMENT 0 YS2-11e03.p1k chrm 62 357 46309 46308 F 296 0.00 502 reject_low 9 ALIGNMENT 50 YS2-11e03.p1k chrm 109 42 75607 75674 C 68 92.65 502 ambiguous 13 ALIGNMENT 0 YS2-11e03.q1k chrm 424 163 3102 9026 C 262 0.00 536 reject_low 32 ALIGNMENT 50 YS2-11e03.q1k chrm 409 478 9473 9544 F 70 91.43 536 reject_low 29 ALIGNMENT 0 YS2-11e03.q1k chrm 97 263 82808 82807 F 167 0.00 536 ambiguous 1 ALIGNMENT 65 YS2-11e03.q1k chrm 102 179 9476 9553 F 78 96.15 536 reject_low 5 ALIGNMENT 44 YS2-11e03.q1k chrm 485 366 2075 2193 C 120 84.17 536 ambiguous 27 ALIGNMENT 0 YS2-11e03.p1k chrm 502 101 82 81 C 402 0.00 502 ambiguous 21 ALIGNMENT 63 YS2-11e03.q1k chrm 181 100 8212 8293 C 82 92.68 536 reject_low 26 ALIGNMENT 0 YS2-11e03.p1k chrm 451 502 69532 69531 F 52 0.00 502 reject_low 42 ALIGNMENT 0 YS2-11e03.q1k chrm 536 158 66828 66827 C 379 0.00 536 reject_low 36 ALIGNMENT 45 YS2-11e03.p1k chrm 354 405 2085 2136 F 52 96.15 502 reject_low 4,26,30,31,32 ALIGNMENT 0 YS2-11e03.p1k chrm 104 355 76645 80493 F 252 0.00 502 reject_low 38 ALIGNMENT 55 YS2-11e03.p1k chrm 432 353 2722 2804 C 80 91.25 502 ambiguous 39 ALIGNMENT 0 YS2-11e03.q1k chrm 417 164 76645 83047 C 254 0.00 536 reject_low 43 ALIGNMENT 40 YS2-11e03.p1k chrm 33 96 11022 11088 F 64 89.06 502 reject_low 7 ALIGNMENT 48 YS2-11e03.q1k chrm 478 425 3048 3101 C 54 96.30 536 reject_low 4,26,32 ALIGNMENT 49 YS2-11e03.p1k chrm 406 356 47474 47524 C 51 100.00 502 ambiguous 40 ALIGNMENT 37 YS2-11e03.p1k chrm 36 155 2075 2193 F 120 82.50 502 reject_low 6,28,34 ALIGNMENT 38 YS2-11e03.p1k chrm 56 111 53828 53883 F 56 89.29 502 ambiguous 18 ALIGNMENT 38 YS2-11e03.p1k chrm 130 55 2720 2793 C 76 85.53 502 ambiguous 15 ALIGNMENT 54 YS2-11e03.p1k chrm 351 407 50098 50154 F 57 98.25 502 reject_low 25 ALIGNMENT 48 YS2-11e03.p1k chrm 342 408 81381 81448 F 67 91.04 502 reject_low 33 ALIGNMENT 0 YS2-11e03.q1k chrm 536 162 34284 34283 C 375 0.00 536 ambiguous 12 ALIGNMENT 0 YS2-11e03.p1k chrm 352 113 2805 9472 C 240 0.00 502 ambiguous 39 ALIGNMENT 0 YS2-11e03.p1k chrm 62 328 34897 34896 F 267 0.00 502 reject_low 3 ALIGNMENT 0 YS2-11e03.q1k chrm 536 164 83049 83048 C 373 0.00 536 reject_low 38 ALIGNMENT 0 YS2-11e03.q1k chrm 424 182 3102 8211 C 243 0.00 536 reject_low 26 ALIGNMENT 0 YS2-11e03.p1k chrm 448 502 53908 53907 F 55 0.00 502 reject_low 35 ALIGNMENT 0 YS2-11e03.p1k chrm 502 409 52330 52329 C 94 0.00 502 ambiguous 17 ALIGNMENT 52 YS2-11e03.p1k chrm 356 418 80494 80557 F 63 95.24 502 reject_low 38 ALIGNMENT 51 YS2-11e03.p1k chrm 329 405 34897 34976 F 77 90.91 502 reject_low 3 ALIGNMENT 59 YS2-11e03.p1k chrm 353 414 76584 76645 F 62 98.39 502 reject_low 43 ALIGNMENT 58 YS2-11e03.q1k chrm 466 380 69444 69528 C 87 91.95 536 reject_low 42 ALIGNMENT 0 YS2-11e03.p1k chrm 62 353 2085 2084 F 292 0.00 502 reject_low 4,26,30,31,32 ALIGNMENT 0 YS2-11e03.p1k chrm 454 502 69145 69144 F 49 0.00 502 reject_low 24 ALIGNMENT 0 YS2-11e03.q1k chrm 536 479 3049 3048 C 58 0.00 536 reject_low 4,26,32 ALIGNMENT 0 YS2-11e03.p1k chrm 409 502 83098 83097 F 94 0.00 502 reject_low 37 ALIGNMENT 42 YS2-11e03.p1k chrm 353 446 52762 52855 F 94 84.04 502 reject_low 36 ALIGNMENT 0 YS2-11e03.q1k chrm 420 97 83100 83099 C 324 0.00 536 reject_low 33,37 ALIGNMENT 39 YS2-11e03.p1k chrm 55 106 69054 69105 F 52 92.31 502 ambiguous 19 ALIGNMENT 50 YS2-11e03.q1k chrm 161 102 34283 34342 C 60 95.00 536 ambiguous 12 ALIGNMENT 61 YS2-11e03.q1k chrm 186 101 11477 11563 C 86 93.02 536 reject_low 28 ALIGNMENT 0 YS2-11e03.p1k chrm 62 363 66827 66826 F 302 0.00 502 reject_low 10 ALIGNMENT 0 YS2-11e03.p1k chrm 97 502 11088 11087 F 406 0.00 502 reject_low 7 ALIGNMENT 0 YS2-11e03.q1k chrm 536 466 53829 53828 C 71 0.00 536 reject_low 9 ALIGNMENT 0 YS2-11e03.p1k chrm 99 358 52816 53822 F 260 0.00 502 reject_low 35 ALIGNMENT 46 YS2-11e03.q1k chrm 483 379 8217 8324 C 105 83.81 536 reject_low 31 ALIGNMENT 0 YS2-11e03.p1k chrm 97 356 66869 69046 F 260 0.00 502 reject_low 24 ALIGNMENT 0 YS2-11e03.p1k chrm 502 131 2721 2720 C 372 0.00 502 ambiguous 15 ALIGNMENT 0 YS2-11e03.p1k chrm 355 62 12319 12318 C 294 0.00 502 reject_low 5 ALIGNMENT 0 YS2-11e03.p1k chrm 409 502 81448 81447 F 94 0.00 502 reject_low 33 ALIGNMENT 45 YS2-11e03.p1k chrm 408 356 52329 52382 C 53 96.23 502 ambiguous 17 ALIGNMENT 0 YS2-11e03.q1k chrm 115 97 2137 2136 C 19 0.00 536 reject_low 6 ALIGNMENT 56 YS2-11e03.q1k chrm 162 89 69439 69514 C 74 93.24 536 reject_low 24 ALIGNMENT 36 YS2-11e03.p1k chrm 100 57 81 124 C 44 95.45 502 ambiguous 21 ALIGNMENT 0 YS2-11e03.q1k chrm 536 484 9014 9013 C 53 0.00 536 reject_low 30 ALIGNMENT 0 YS2-11e03.p1k chrm 357 113 133 9472 C 245 0.00 502 ambiguous 41 ALIGNMENT 0 YS2-11e03.q1k chrm 536 484 8218 8217 C 53 0.00 536 reject_low 31 ALIGNMENT 0 YS2-11e03.q1k chrm 379 169 69529 76583 C 211 0.00 536 reject_low 42 ALIGNMENT 42 YS2-11e03.q1k chrm 466 411 34935 34991 C 56 92.86 536 ambiguous 14 ALIGNMENT 41 YS2-11e03.p1k chrm 55 138 80503 80585 F 84 85.71 502 reject_low 33 ALIGNMENT 0 YS2-11e03.q1k chrm 180 536 9553 9552 F 357 0.00 536 reject_low 5 ALIGNMENT 0 YS2-11e03.p1k chrm 97 358 66869 69438 F 262 0.00 502 reject_low 42 ALIGNMENT 44 YS2-11e03.q1k chrm 465 410 53828 53883 C 56 92.86 536 reject_low 9 ALIGNMENT 0 YS2-11e03.p1k chrm 406 502 2136 2135 F 97 0.00 502 reject_low 4,26,30,31,32 ALIGNMENT 951 YS2-11e04.p1k chr07 1115 29 270006 271103 C 1087 96.41 1250 accept 0 ALIGNMENT 0 YS2-11e04.p1k chr04 800 62 226878 226877 C 739 0.00 1250 reject_low 1 ALIGNMENT 30 YS2-11e04.p1k chr02 856 802 353594 353647 C 55 92.73 1250 reject_low 2 ALIGNMENT 0 YS2-11e04.p1k chr02 874 857 353595 353594 C 18 0.00 1250 reject_low 2 ALIGNMENT 32 YS2-11e04.p1k chr04 858 801 226821 226877 C 58 93.10 1250 reject_low 1 ALIGNMENT 925 YS2-11e04.q1k chr07 28 1065 268995 270048 F 1038 97.40 1129 accept 0 ALIGNMENT 0 YS2-11e04.p1k chr04 874 859 226822 226821 C 16 0.00 1250 reject_low 1 ALIGNMENT 0 YS2-11e04.p1k chr02 801 62 353648 353647 C 740 0.00 1250 reject_low 2 ALIGNMENT 342 YS2-11e05.q1k scplasm1 1171 538 2322 2955 C 634 84.70 1182 accept 0 ALIGNMENT 0 YS2-11e05.q1k scplasm1 537 62 2956 2955 C 476 0.00 1182 accept 0 ALIGNMENT 951 YS2-11e06.p1k chr12 1159 31 398151 399291 C 1129 95.39 1256 accept 0 ALIGNMENT 842 YS2-11e06.q1k chr12 31 1058 393299 394343 F 1028 94.65 1149 accept 0 ALIGNMENT 989 YS2-11e07.q1k chr05 36 1148 193538 194666 F 1113 96.95 1152 accept 0 ALIGNMENT 993 YS2-11e07.p1k chr05 1157 34 196727 197853 C 1124 96.80 1204 accept 0 ALIGNMENT 975 YS2-11e08.q1k chr16 1177 28 183578 184746 C 1150 96.61 1179 accept 0 ALIGNMENT 954 YS2-11e08.p1k chr16 25 1132 180418 181534 F 1108 96.66 1256 accept 0 ALIGNMENT 897 YS2-11e09.q1k chr02 1179 35 691270 692418 C 1145 93.97 1188 accept 0 ALIGNMENT 0 YS2-11e10.q1k vc_1 284 62 2513 2512 C 223 0.00 325 reject_low 2 ALIGNMENT 0 YS2-11e10.q1k vc_5 286 62 37 36 C 225 0.00 325 reject_low 7 ALIGNMENT 0 YS2-11e10.q1k vc_3 284 62 2513 2512 C 223 0.00 325 reject_low 3 ALIGNMENT 36 YS2-11e10.q1k vc_5 322 287 1 36 C 36 100.00 325 reject_low 7 ALIGNMENT 246 YS2-11e10.p1k chr16 285 29 346952 347208 C 257 100.00 304 accept_chi 0 ALIGNMENT 246 YS2-11e10.q1k chr16 29 285 346952 347208 F 257 100.00 325 accept_chi 1 ALIGNMENT 41 YS2-11e10.q1k vc_1 325 285 2472 2512 C 41 100.00 325 reject_low 2 ALIGNMENT 38 YS2-11e10.q1k vc_7 288 325 13525 13562 F 38 100.00 325 reject_low 6 ALIGNMENT 39 YS2-11e10.q1k vc_5 325 287 5025 5063 C 39 100.00 325 reject_low 5 ALIGNMENT 0 YS2-11e10.q1k vc_5 286 62 5064 5063 C 225 0.00 325 reject_low 5 ALIGNMENT 0 YS2-11e10.q1k chr16 286 325 347208 347207 F 40 0.00 325 accept_chi 1 ALIGNMENT 0 YS2-11e10.p1k chr16 304 286 346953 346952 C 19 0.00 304 accept_chi 0 ALIGNMENT 41 YS2-11e10.q1k vc_3 325 285 2472 2512 C 41 100.00 325 reject_low 3 ALIGNMENT 41 YS2-11e10.q1k vc_4 285 325 5831 5871 F 41 100.00 325 reject_low 4 ALIGNMENT 0 YS2-11e10.q1k vc_4 62 284 5831 5830 F 223 0.00 325 reject_low 4 ALIGNMENT 0 YS2-11e10.q1k vc_7 62 287 13525 13524 F 226 0.00 325 reject_low 6 ALIGNMENT 938 YS2-11e12.q1k chr11 1185 40 574840 576012 C 1146 96.16 1187 accept 0 ALIGNMENT 996 YS2-11e12.p1k chr11 28 1198 571034 572209 F 1171 96.07 1249 accept 0 ALIGNMENT 0 YS2-11e13.p1k vc_4 62 975 5871 5870 F 914 0.00 1202 reject_low 6 ALIGNMENT 150 YS2-11e13.p1k vc_7 976 1185 100 306 F 210 91.90 1202 reject_low 8 ALIGNMENT 0 YS2-11e13.q1k chrm 62 494 60571 60570 F 433 0.00 1139 reject_low 2 ALIGNMENT 150 YS2-11e13.p1k vc_5 1185 976 4819 5025 C 210 91.90 1202 reject_low 7 ALIGNMENT 150 YS2-11e13.p1k vc_4 976 1185 5871 6077 F 210 91.90 1202 reject_low 6 ALIGNMENT 285 YS2-11e13.p1k chrm 341 26 61867 62182 C 316 99.05 1202|1,0 accept 0 reject_low 1 ALIGNMENT 0 YS2-11e13.p1k chrm 498 495 60486 60570 C 4 0.00 1202 reject_low 1 ALIGNMENT 150 YS2-11e13.p1k vc_2 1185 976 1899 2105 C 210 91.90 1202 reject_low 4 ALIGNMENT 150 YS2-11e13.p1k vc_7 976 1185 13562 13768 F 210 91.90 1202 reject_low 9 ALIGNMENT 0 YS2-11e13.p1k vc_1 975 62 2106 2105 C 914 0.00 1202 reject_low 3 ALIGNMENT 360 YS2-11e13.p1k chrm 958 499 60023 60485 C 460 99.35 1202 reject_low 1 ALIGNMENT 0 YS2-11e13.p1k chrm 953 342 61868 61867 C 612 0.00 1202 accept 0 ALIGNMENT 0 YS2-11e13.q1k chrm 491 494 60486 60570 F 4 0.00 1139 accept 0 ALIGNMENT 0 YS2-11e13.p1k vc_2 975 62 2106 2105 C 914 0.00 1202 reject_low 4 ALIGNMENT 348 YS2-11e13.q1k chrm 32 490 60023 60485 F 459 98.47 1139 accept 0 ALIGNMENT 150 YS2-11e13.p1k vc_3 1185 976 1899 2105 C 210 91.90 1202 reject_low 5 ALIGNMENT 0 YS2-11e13.q1k chrm 650 830 60725 60724 F 181 0.00 1139 accept 0 ALIGNMENT 0 YS2-11e13.p1k vc_3 975 62 2106 2105 C 914 0.00 1202 reject_low 5 ALIGNMENT 264 YS2-11e13.q1k chrm 648 964 61867 62182 F 317 96.53 1139|1,0 reject_low 2 ALIGNMENT 138 YS2-11e13.q1k chrm 495 649 60571 60725 F 155 100.00 1139|0,1 accept 0 reject_low 2 ALIGNMENT 0 YS2-11e13.p1k vc_7 62 975 13562 13561 F 914 0.00 1202 reject_low 9 ALIGNMENT 138 YS2-11e13.p1k chrm 494 340 60571 60725 C 155 100.00 1202|0,1 reject_low 1 ALIGNMENT 0 YS2-11e13.p1k chrm 340 341 60725 61867 C 0 0.00 1202 reject_low 1 ALIGNMENT 0 YS2-11e13.q1k chrm 649 648 60725 61867 F 0 0.00 1139 reject_low 2 ALIGNMENT 150 YS2-11e13.p1k vc_1 1185 976 1899 2105 C 210 91.90 1202 reject_low 3 ALIGNMENT 0 YS2-11e13.p1k vc_7 62 975 100 99 F 914 0.00 1202 reject_low 8 ALIGNMENT 0 YS2-11e13.p1k vc_5 975 62 5026 5025 C 914 0.00 1202 reject_low 7 ALIGNMENT 969 YS2-11e14.q1k chr07 1181 36 211439 212589 C 1146 95.81 1184 accept 0 ALIGNMENT 896 YS2-11e14.p1k chr07 30 1249 208455 209652 F 1220 92.87 1303 accept 0 ALIGNMENT 105 YS2-11e14.p1k chr07 623 979 423987 424344 F 357 77.03 1303 reject_low 1 ALIGNMENT 0 YS2-11e14.p1k chr07 62 622 423987 423986 F 561 0.00 1303 reject_low 1 ALIGNMENT 957 YS2-11e15.p1k chr08 29 1156 120918 122062 F 1128 96.19 1193 accept 0 ALIGNMENT 933 YS2-11e15.q1k chr08 1105 36 125304 126367 C 1070 96.54 1119 accept 0 ALIGNMENT 0 YS2-11e16.q1k vc_1 238 62 2513 2512 C 177 0.00 279 reject_low 2 ALIGNMENT 41 YS2-11e16.q1k vc_4 239 279 5831 5871 F 41 100.00 279 reject_low 4 ALIGNMENT 0 YS2-11e16.q1k vc_3 238 62 2513 2512 C 177 0.00 279 reject_low 3 ALIGNMENT 38 YS2-11e16.q1k vc_7 242 279 13525 13562 F 38 100.00 279 reject_low 6 ALIGNMENT 41 YS2-11e16.q1k vc_1 279 239 2472 2512 C 41 100.00 279 reject_low 2 ALIGNMENT 0 YS2-11e16.q1k vc_5 240 62 5064 5063 C 179 0.00 279 reject_low 5 ALIGNMENT 36 YS2-11e16.q1k vc_5 276 241 1 36 C 36 100.00 279 reject_low 7 ALIGNMENT 0 YS2-11e16.q1k vc_7 62 241 13525 13524 F 180 0.00 279 reject_low 6 ALIGNMENT 41 YS2-11e16.q1k vc_3 279 239 2472 2512 C 41 100.00 279 reject_low 3 ALIGNMENT 39 YS2-11e16.q1k vc_5 279 241 5025 5063 C 39 100.00 279 reject_low 5 ALIGNMENT 0 YS2-11e16.q1k vc_5 240 62 37 36 C 179 0.00 279 reject_low 7 ALIGNMENT 0 YS2-11e16.p1k chr08 254 237 244736 244735 C 18 0.00 254 accept_chi 0 ALIGNMENT 202 YS2-11e16.q1k chr08 30 238 244735 244944 F 209 99.52 279 accept_chi 1 ALIGNMENT 202 YS2-11e16.p1k chr08 236 32 244735 244939 C 205 100.00 254 accept_chi 0 ALIGNMENT 0 YS2-11e16.q1k chr08 239 279 244944 244943 F 41 0.00 279 accept_chi 1 ALIGNMENT 0 YS2-11e16.q1k vc_4 62 238 5831 5830 F 177 0.00 279 reject_low 4 ALIGNMENT 951 YS2-11e17.q1k chr02 1093 33 475495 476554 C 1061 97.08 1104 accept 0 ALIGNMENT 1020 YS2-11e17.p1k chr02 76 1217 475035 476177 F 1142 97.11 1236 accept 0 ALIGNMENT 21 YS2-11e18.p1k chr07 847 877 307184 307214 F 31 100.00 1257 reject_low 1 ALIGNMENT 960 YS2-11e18.q1k chr04 36 1135 501113 502214 F 1100 96.73 1148 accept 0 ALIGNMENT 0 YS2-11e18.p1k chr07 62 846 307184 307183 F 785 0.00 1257 reject_low 1 ALIGNMENT 932 YS2-11e18.p1k chr04 1225 27 504867 506069 C 1199 94.16 1257 accept 0 ALIGNMENT 0 YS2-11e18.p1k chr07 878 892 307214 307213 F 15 0.00 1257 reject_low 1 ALIGNMENT 961 YS2-11e19.q1k chr15 1130 37 426057 427152 C 1094 97.07 1130 accept 0 ALIGNMENT 979 YS2-11e19.p1k chr15 57 1198 424187 425335 F 1142 95.62 1201 accept 0 ALIGNMENT 36 YS2-11e20.q1k vc_5 572 537 1 36 C 36 100.00 575 reject_low 8 ALIGNMENT 0 YS2-11e20.p1k chr02 526 543 191318 191317 F 18 0.00 543 accept_chi 0 ALIGNMENT 0 YS2-11e20.q1k vc_2 534 62 2146 2145 C 473 0.00 575 reject_low 3 ALIGNMENT 41 YS2-11e20.q1k vc_3 575 535 2472 2512 C 41 100.00 575 reject_low 4 ALIGNMENT 38 YS2-11e20.q1k vc_7 538 575 13525 13562 F 38 100.00 575 reject_low 7 ALIGNMENT 0 YS2-11e20.q1k chr02 575 536 190821 190820 C 40 0.00 575 accept_chi 1 ALIGNMENT 483 YS2-11e20.p1k chr02 27 525 190820 191318 F 499 99.60 543 accept_chi 0 ALIGNMENT 0 YS2-11e20.q1k vc_4 62 534 5831 5830 F 473 0.00 575 reject_low 5 ALIGNMENT 41 YS2-11e20.q1k vc_2 575 535 2105 2145 C 41 100.00 575 reject_low 3 ALIGNMENT 41 YS2-11e20.q1k vc_1 575 535 2472 2512 C 41 100.00 575 reject_low 2 ALIGNMENT 0 YS2-11e20.q1k vc_3 534 62 2513 2512 C 473 0.00 575 reject_low 4 ALIGNMENT 470 YS2-11e20.q1k chr02 535 36 190820 191318 C 500 99.00 575 accept_chi 1 ALIGNMENT 0 YS2-11e20.q1k vc_7 62 537 13525 13524 F 476 0.00 575 reject_low 7 ALIGNMENT 0 YS2-11e20.q1k vc_5 536 62 37 36 C 475 0.00 575 reject_low 8 ALIGNMENT 39 YS2-11e20.q1k vc_5 575 537 5025 5063 C 39 100.00 575 reject_low 6 ALIGNMENT 41 YS2-11e20.q1k vc_4 535 575 5831 5871 F 41 100.00 575 reject_low 5 ALIGNMENT 0 YS2-11e20.q1k vc_1 534 62 2513 2512 C 473 0.00 575 reject_low 2 ALIGNMENT 0 YS2-11e20.q1k vc_5 536 62 5064 5063 C 475 0.00 575 reject_low 6 ALIGNMENT 670 YS2-11e21.q1k chr12 970 27 459816 460799 C 944 92.27 1072 accept 0 ALIGNMENT 0 YS2-11e21.q1k chr12 715 258 451420 451419 C 458 0.00 1072 reject_low 2 ALIGNMENT 746 YS2-11e21.p1k chr12 52 1166 458282 459360 F 1115 91.93 1177 accept 0 ALIGNMENT 149 YS2-11e21.q1k chr12 257 27 451419 451662 C 231 90.91 1072 reject_low 2 ALIGNMENT 746 YS2-11e21.p1k chr12 52 1166 467419 468497 F 1115 91.93 1177 reject_low 1 ALIGNMENT 222 YS2-11e22.q1k chr07 38 288 319517 319766 F 251 98.01 1086 reject_low 9 ALIGNMENT 0 YS2-11e22.q1k chr16 822 278 856552 856551 C 545 0.00 1086 reject_low 19 ALIGNMENT 211 YS2-11e22.q1k chr04 287 38 1023131 1023380 C 250 96.40 1086 reject_low 21 ALIGNMENT 220 YS2-11e22.q1k chr07 287 38 401619 401868 C 250 97.60 1086 reject_low 13 ALIGNMENT 218 YS2-11e22.q1k chr07 287 38 712210 712458 C 250 97.60 1086 reject_low 15 ALIGNMENT 217 YS2-11e22.q1k chr04 287 38 668091 668340 C 250 97.20 1086 reject_low 20 ALIGNMENT 0 YS2-11e22.q1k chr05 289 822 434968 434967 F 534 0.00 1086 reject_low 6 ALIGNMENT 227 YS2-11e22.q1k chr12 287 38 374000 374248 C 250 98.80 1086 reject_low 7 ALIGNMENT 0 YS2-11e22.q1k chr09 822 288 205218 205217 C 535 0.00 1086 reject_low 16 ALIGNMENT 0 YS2-11e22.q1k chr03 77 78 168594 168932 C 0 0.00 1086 accept_chi 1 ALIGNMENT 295 YS2-11e22.q1k chr05 38 381 250020 250361 F 344 96.80 1086 reject_low 2 ALIGNMENT 0 YS2-11e22.q1k chr07 822 288 712211 712210 C 535 0.00 1086 reject_low 15 ALIGNMENT 0 YS2-11e22.q1k chr04 822 288 668092 668091 C 535 0.00 1086 reject_low 20 ALIGNMENT 0 YS2-11e22.q1k chr14 822 289 726235 726234 C 534 0.00 1086 reject_low 14 ALIGNMENT 0 YS2-11e22.q1k chr14 822 159 546554 546553 C 664 0.00 1086 reject_low 22 ALIGNMENT 0 YS2-11e22.q1k chr08 288 822 146664 146663 F 535 0.00 1086 reject_low 5 ALIGNMENT 949 YS2-11e22.p1k chr15 27 1195 55731 56912 F 1169 94.78 1195 accept_chi 0 ALIGNMENT 236 YS2-11e22.q1k chr07 288 38 735986 736236 C 251 99.60 1086 reject_low 3 ALIGNMENT 0 YS2-11e22.q1k chr07 289 822 319766 319765 F 534 0.00 1086 reject_low 9 ALIGNMENT 903 YS2-11e22.q1k chr03 1079 76 167591 168595 C 1004 97.71 1086|0,2 accept_chi 1 ALIGNMENT 218 YS2-11e22.q1k chr14 287 38 546739 546987 C 250 97.60 1086 reject_low 18 ALIGNMENT 0 YS2-11e22.q1k chr02 822 288 197718 197717 C 535 0.00 1086 reject_low 8 ALIGNMENT 23 YS2-11e22.q1k chr14 158 39 546553 546674 C 120 75.83 1086 reject_low 22 ALIGNMENT 235 YS2-11e22.q1k chr08 38 287 146415 146664 F 250 99.60 1086 reject_low 5 ALIGNMENT 0 YS2-11e22.q1k chr07 822 288 401620 401619 C 535 0.00 1086 reject_low 13 ALIGNMENT 36 YS2-11e22.q1k chr03 78 38 168932 168972 C 41 100.00 1086|1,0 accept_chi 1 ALIGNMENT 223 YS2-11e22.q1k chr16 287 38 769317 769566 C 250 98.00 1086 reject_low 11 ALIGNMENT 218 YS2-11e22.q1k chr16 277 38 856551 856790 C 240 98.75 1086 reject_low 19 ALIGNMENT 0 YS2-11e22.q1k chr05 382 822 250361 250360 F 441 0.00 1086 reject_low 2 ALIGNMENT 0 YS2-11e22.q1k chr04 288 822 946289 946288 F 535 0.00 1086 reject_low 4 ALIGNMENT 0 YS2-11e22.q1k chr11 288 822 202629 202628 F 535 0.00 1086 reject_low 17 ALIGNMENT 0 YS2-11e22.q1k chr14 822 288 546740 546739 C 535 0.00 1086 reject_low 18 ALIGNMENT 223 YS2-11e22.q1k chr15 287 38 854273 854522 C 250 98.00 1086 reject_low 10 ALIGNMENT 0 YS2-11e22.q1k chr12 822 288 374001 374000 C 535 0.00 1086 reject_low 7 ALIGNMENT 218 YS2-11e22.q1k chr11 38 287 202381 202629 F 250 97.60 1086 reject_low 17 ALIGNMENT 219 YS2-11e22.q1k chr01 288 38 182613 182862 C 251 97.61 1086 reject_low 12 ALIGNMENT 0 YS2-11e22.q1k chr16 822 288 769318 769317 C 535 0.00 1086 reject_low 11 ALIGNMENT 0 YS2-11e22.q1k chr01 822 289 182614 182613 C 534 0.00 1086 reject_low 12 ALIGNMENT 226 YS2-11e22.q1k chr02 287 38 197717 197966 C 250 98.40 1086 reject_low 8 ALIGNMENT 230 YS2-11e22.q1k chr05 38 288 434718 434968 F 251 98.80 1086 reject_low 6 ALIGNMENT 235 YS2-11e22.q1k chr04 38 287 946040 946289 F 250 99.60 1086 reject_low 4 ALIGNMENT 218 YS2-11e22.q1k chr09 287 38 205217 205465 C 250 97.60 1086 reject_low 16 ALIGNMENT 0 YS2-11e22.q1k chr04 822 288 1023132 1023131 C 535 0.00 1086 reject_low 21 ALIGNMENT 0 YS2-11e22.q1k chr15 822 288 854274 854273 C 535 0.00 1086 reject_low 10 ALIGNMENT 218 YS2-11e22.q1k chr14 288 38 726234 726484 C 251 97.21 1086 reject_low 14 ALIGNMENT 0 YS2-11e22.q1k chr07 822 289 735987 735986 C 534 0.00 1086 reject_low 3 ALIGNMENT 293 YS2-11e23.q1k chr12 803 73 459938 460692 C 731 81.26 1082 accept 0 ALIGNMENT 0 YS2-11e24.q1k chr10 612 62 175689 175688 C 551 0.00 1058 reject_low 15 ALIGNMENT 23 YS2-11e24.q1k chr06 610 583 202472 202499 C 28 96.43 1058 reject_low 17 ALIGNMENT 22 YS2-11e24.q1k chr11 609 586 561409 561432 C 24 100.00 1058 reject_low 19 ALIGNMENT 23 YS2-11e24.q1k chr11 635 583 576114 576166 C 53 83.02 1058 reject_low 18 ALIGNMENT 0 YS2-11e24.q1k chr01 62 589 116481 116480 F 528 0.00 1058 reject_low 16 ALIGNMENT 38 YS2-11e24.q1k chr08 647 586 365398 365459 C 62 88.71 1058 reject_low 8 ALIGNMENT 0 YS2-11e24.q1k chr08 834 648 252924 252923 C 187 0.00 1058 reject_low 11 ALIGNMENT 933 YS2-11e24.q1k chr07 35 1057 69615 70628 F 1023 98.14 1058 accept 0 ALIGNMENT 0 YS2-11e24.q1k chr08 834 636 365369 365368 C 199 0.00 1058 reject_low 10 ALIGNMENT 0 YS2-11e24.q1k chr11 583 62 576202 576201 C 522 0.00 1058 reject_low 7 ALIGNMENT 1020 YS2-11e24.p1k chr07 1192 31 73769 74940 C 1162 97.16 1192 accept 0 ALIGNMENT 100 YS2-11e24.p1k chr09 40 285 246792 247035 F 246 81.71 1192 reject_low 1 ALIGNMENT 0 YS2-11e24.q1k chr08 581 62 252989 252988 C 520 0.00 1058 reject_low 11 ALIGNMENT 41 YS2-11e24.q1k chr11 644 584 576141 576201 C 61 90.16 1058 reject_low 7 ALIGNMENT 30 YS2-11e24.q1k chr08 647 582 252923 252988 C 66 83.33 1058 reject_low 11 ALIGNMENT 27 YS2-11e24.q1k chr08 647 595 365437 365489 C 53 84.91 1058 reject_low 14 ALIGNMENT 35 YS2-11e24.q1k chr08 635 583 365368 365420 C 53 90.57 1058 reject_low 10 ALIGNMENT 0 YS2-11e24.q1k chr06 834 611 202473 202472 C 224 0.00 1058 reject_low 17 ALIGNMENT 45 YS2-11e24.p1k chr05 1071 1148 438699 438778 F 78 88.46 1192 reject_low 4 ALIGNMENT 0 YS2-11e24.q1k chr11 834 636 576115 576114 C 199 0.00 1058 reject_low 18 ALIGNMENT 0 YS2-11e24.q1k chr01 627 834 116517 116516 F 208 0.00 1058 reject_low 16 ALIGNMENT 0 YS2-11e24.q1k chr04 636 834 604287 604286 F 199 0.00 1058 reject_low 9 ALIGNMENT 0 YS2-11e24.q1k chr11 585 62 561433 561432 C 524 0.00 1058 reject_low 19 ALIGNMENT 0 YS2-11e24.p1k chr13 1070 62 372515 372514 C 1009 0.00 1192 reject_low 3 ALIGNMENT 0 YS2-11e24.q1k chr11 582 62 576167 576166 C 521 0.00 1058 reject_low 18 ALIGNMENT 0 YS2-11e24.q1k chr15 582 62 428041 428040 C 521 0.00 1058 reject_low 5 ALIGNMENT 0 YS2-11e24.q1k chr15 585 62 427963 427962 C 524 0.00 1058 reject_low 6 ALIGNMENT 0 YS2-11e24.q1k chr08 582 62 365421 365420 C 521 0.00 1058 reject_low 10 ALIGNMENT 38 YS2-11e24.q1k chr04 586 635 604238 604287 F 50 94.00 1058 reject_low 9 ALIGNMENT 0 YS2-11e24.p1k chr10 62 1070 378279 378278 F 1009 0.00 1192 reject_low 2 ALIGNMENT 0 YS2-11e24.q1k chr11 834 645 576142 576141 C 190 0.00 1058 reject_low 7 ALIGNMENT 0 YS2-11e24.q1k chr08 594 62 365490 365489 C 533 0.00 1058 reject_low 14 ALIGNMENT 0 YS2-11e24.q1k chr15 834 648 427902 427901 C 187 0.00 1058 reject_low 6 ALIGNMENT 0 YS2-11e24.p1k chr05 62 1070 438699 438698 F 1009 0.00 1192 reject_low 4 ALIGNMENT 34 YS2-11e24.q1k chr04 632 587 834001 834046 C 46 93.48 1058 reject_low 13 ALIGNMENT 0 YS2-11e24.q1k chr06 582 62 202500 202499 C 521 0.00 1058 reject_low 17 ALIGNMENT 0 YS2-11e24.q1k chr04 834 633 834002 834001 C 202 0.00 1058 reject_low 13 ALIGNMENT 23 YS2-11e24.q1k chr10 645 613 175656 175688 C 33 90.91 1058 reject_low 15 ALIGNMENT 41 YS2-11e24.q1k chr15 647 586 427901 427962 C 62 90.32 1058 reject_low 6 ALIGNMENT 0 YS2-11e24.q1k chr04 586 62 834047 834046 C 525 0.00 1058 reject_low 13 ALIGNMENT 26 YS2-11e24.q1k chr01 590 626 116481 116517 F 37 91.89 1058 reject_low 16 ALIGNMENT 0 YS2-11e24.p1k chr09 286 914 247035 247034 F 629 0.00 1192 reject_low 1 ALIGNMENT 46 YS2-11e24.p1k chr13 1146 1071 372437 372514 C 76 89.47 1192 reject_low 3 ALIGNMENT 0 YS2-11e24.q1k chr10 834 646 175657 175656 C 189 0.00 1058 reject_low 15 ALIGNMENT 0 YS2-11e24.q1k chr04 62 585 604238 604237 F 524 0.00 1058 reject_low 9 ALIGNMENT 0 YS2-11e24.q1k chr08 580 62 252966 252965 C 519 0.00 1058 reject_low 12 ALIGNMENT 0 YS2-11e24.q1k chr08 834 648 365399 365398 C 187 0.00 1058 reject_low 8 ALIGNMENT 46 YS2-11e24.p1k chr10 1071 1159 378279 378367 F 89 87.64 1192 reject_low 2 ALIGNMENT 0 YS2-11e24.q1k chr11 834 610 561410 561409 C 225 0.00 1058 reject_low 19 ALIGNMENT 28 YS2-11e24.q1k chr08 647 581 252899 252965 C 67 82.09 1058 reject_low 12 ALIGNMENT 0 YS2-11e24.q1k chr15 834 645 427980 427979 C 190 0.00 1058 reject_low 5 ALIGNMENT 47 YS2-11e24.q1k chr15 644 583 427979 428040 C 62 93.55 1058 reject_low 5 ALIGNMENT 0 YS2-11e24.q1k chr08 834 648 365438 365437 C 187 0.00 1058 reject_low 14 ALIGNMENT 0 YS2-11e24.q1k chr08 585 62 365460 365459 C 524 0.00 1058 reject_low 8 ALIGNMENT 0 YS2-11e24.q1k chr08 834 648 252900 252899 C 187 0.00 1058 reject_low 12 ALIGNMENT 1032 YS2-11f01.p1k chr06 30 1257 268392 269616 F 1228 96.42 1262 ambiguous_tel 0 ALIGNMENT 1019 YS2-11f01.q1k chr11 1137 37 494565 495667 C 1101 98.46 1138 accept 1 ALIGNMENT 41 YS2-11f02.q1k vc_1 482 442 2472 2512 C 41 100.00 482 reject_low 6 ALIGNMENT 0 YS2-11f02.q1k chr13 295 62 921414 921413 C 234 0.00 482 ambiguous_tel 0 ALIGNMENT 142 YS2-11f02.q1k chr13 441 296 921268 921413 C 146 100.00 482 ambiguous_tel 0 ALIGNMENT 36 YS2-11f02.q1k vc_5 479 444 1 36 C 36 100.00 482 reject_low 12 ALIGNMENT 0 YS2-11f02.q1k vc_5 443 62 37 36 C 382 0.00 482 reject_low 12 ALIGNMENT 142 YS2-11f02.q1k chr16 296 441 9543 9688 F 146 100.00 482 ambiguous_tel 2 ALIGNMENT 135 YS2-11f02.p1k chr16 168 30 9543 9681 C 139 100.00 444 ambiguous_tel 5 ALIGNMENT 0 YS2-11f02.q1k vc_4 62 441 5831 5830 F 380 0.00 482 reject_low 9 ALIGNMENT 0 YS2-11f02.q1k vc_7 62 444 13525 13524 F 383 0.00 482 reject_low 11 ALIGNMENT 38 YS2-11f02.q1k vc_7 445 482 13525 13562 F 38 100.00 482 reject_low 11 ALIGNMENT 0 YS2-11f02.q1k chr15 295 62 1081600 1081599 C 234 0.00 482 ambiguous_tel 1 ALIGNMENT 0 YS2-11f02.p1k chr15 169 444 1081599 1081598 F 276 0.00 444 ambiguous_tel 4 ALIGNMENT 39 YS2-11f02.q1k vc_5 482 444 5025 5063 C 39 100.00 482 reject_low 10 ALIGNMENT 0 YS2-11f02.q1k chr13 482 442 921269 921268 C 41 0.00 482 ambiguous_tel 0 ALIGNMENT 135 YS2-11f02.p1k chr13 26 168 921270 921413 F 143 99.30 444 ambiguous_tel 3 ALIGNMENT 0 YS2-11f02.q1k vc_1 441 62 2513 2512 C 380 0.00 482 reject_low 6 ALIGNMENT 0 YS2-11f02.q1k chr16 442 482 9688 9687 F 41 0.00 482 ambiguous_tel 2 ALIGNMENT 0 YS2-11f02.q1k vc_3 441 62 2513 2512 C 380 0.00 482 reject_low 8 ALIGNMENT 41 YS2-11f02.q1k vc_2 482 442 2105 2145 C 41 100.00 482 reject_low 7 ALIGNMENT 0 YS2-11f02.q1k vc_5 443 62 5064 5063 C 382 0.00 482 reject_low 10 ALIGNMENT 0 YS2-11f02.q1k chr16 62 295 9543 9542 F 234 0.00 482 ambiguous_tel 2 ALIGNMENT 0 YS2-11f02.q1k chr15 482 442 1081455 1081454 C 41 0.00 482 ambiguous_tel 1 ALIGNMENT 135 YS2-11f02.p1k chr15 26 168 1081456 1081599 F 143 99.30 444 ambiguous_tel 4 ALIGNMENT 41 YS2-11f02.q1k vc_3 482 442 2472 2512 C 41 100.00 482 reject_low 8 ALIGNMENT 142 YS2-11f02.q1k chr15 441 296 1081454 1081599 C 146 100.00 482 ambiguous_tel 1 ALIGNMENT 0 YS2-11f02.q1k vc_2 441 62 2146 2145 C 380 0.00 482 reject_low 7 ALIGNMENT 0 YS2-11f02.p1k chr13 169 444 921413 921412 F 276 0.00 444 ambiguous_tel 3 ALIGNMENT 0 YS2-11f02.p1k chr16 444 169 9544 9543 C 276 0.00 444 ambiguous_tel 5 ALIGNMENT 41 YS2-11f02.q1k vc_4 442 482 5831 5871 F 41 100.00 482 reject_low 9 ALIGNMENT 970 YS2-11f03.q1k chr16 39 1172 366453 367599 F 1134 96.03 1172 accept 0 ALIGNMENT 983 YS2-11f03.p1k chr16 1159 29 370233 371365 C 1131 96.46 1270 accept 0 ALIGNMENT 986 YS2-11f04.p1k chr01 24 1168 40042 41203 F 1145 96.16 1244 accept 0 ALIGNMENT 952 YS2-11f04.q1k chr01 1155 34 44642 45774 C 1122 95.81 1159 accept 0 ALIGNMENT 997 YS2-11f05.p1k chr14 1245 31 589359 590567 C 1215 94.65 1248 accept 0 ALIGNMENT 1009 YS2-11f05.q1k chr14 38 1205 584491 585667 F 1168 96.23 1205 accept 0 ALIGNMENT 975 YS2-11f06.q1k chr07 28 1157 229837 230973 F 1130 96.28 1185 accept 0 ALIGNMENT 992 YS2-11f06.p1k chr07 1153 23 233505 234632 C 1131 96.82 1262 accept 0 ALIGNMENT 918 YS2-11f07.p1k chr14 33 1035 734763 735766 F 1003 97.51 1244 accept 0 ALIGNMENT 943 YS2-11f07.q1k chr14 1200 38 738216 739390 C 1163 94.75 1200 accept 0 ALIGNMENT 1054 YS2-11f09.p1k chr10 1270 30 317270 318519 C 1241 95.25 1307 accept 0 ALIGNMENT 1004 YS2-11f09.q1k chr10 31 1194 313750 314917 F 1164 95.79 1206 accept 0 ALIGNMENT 874 YS2-11f10.q1k chr06 30 1103 220422 221482 F 1074 94.79 1203 accept 0 ALIGNMENT 641 YS2-11f10.q1k chr09 868 104 317167 317929 C 765 94.90 1203 reject_low 1 ALIGNMENT 0 YS2-11f10.q1k chr09 103 62 317930 317929 C 42 0.00 1203 reject_low 1 ALIGNMENT 876 YS2-11f10.p1k chr06 1174 26 224964 226122 C 1149 91.99 1268 accept 0 ALIGNMENT 0 YS2-11f11.q1k chrm 76 62 37773 37772 C 15 0.00 1192 reject_low 1 ALIGNMENT 0 YS2-11f11.p1k chr10 474 62 416749 416748 C 413 0.00 1248 reject_low 2 ALIGNMENT 350 YS2-11f11.q1k chrm 499 77 37350 37772 C 423 100.00 1192 reject_low 1 ALIGNMENT 20 YS2-11f11.q1k chrm 271 310 37539 37578 F 40 100.00 1192 reject_low 3 ALIGNMENT 0 YS2-11f11.p1k chr10 936 575 416646 416645 C 362 0.00 1248 reject_low 2 ALIGNMENT 879 YS2-11f11.q1k chrm 1190 39 36651 37810 C 1152 97.22 1192 accept 0 ALIGNMENT 0 YS2-11f11.q1k chrm 62 270 37539 37538 F 209 0.00 1192 reject_low 3 ALIGNMENT 0 YS2-11f11.q1k chrm 895 500 37351 37350 C 396 0.00 1192 reject_low 1 ALIGNMENT 904 YS2-11f11.p1k chrm 35 1235 36493 37701 F 1201 96.25 1248 accept 0 ALIGNMENT 55 YS2-11f11.p1k chr10 574 475 416645 416748 C 100 91.00 1248 reject_low 2 ALIGNMENT 0 YS2-11f11.q1k chrm 311 895 37578 37577 F 585 0.00 1192 reject_low 3 ALIGNMENT 167 YS2-11f12.q1k chr10 38 215 53977 54154 F 178 100.00 255 accept_chi 1 ALIGNMENT 39 YS2-11f12.q1k vc_5 255 217 5025 5063 C 39 100.00 255 reject_low 5 ALIGNMENT 0 YS2-11f12.q1k vc_5 216 62 37 36 C 155 0.00 255 reject_low 7 ALIGNMENT 167 YS2-11f12.p1k chr10 202 25 53977 54154 C 178 100.00 221 accept_chi 0 ALIGNMENT 0 YS2-11f12.q1k vc_5 216 62 5064 5063 C 155 0.00 255 reject_low 5 ALIGNMENT 0 YS2-11f12.q1k vc_3 214 62 2513 2512 C 153 0.00 255 reject_low 3 ALIGNMENT 0 YS2-11f12.q1k vc_1 214 62 2513 2512 C 153 0.00 255 reject_low 2 ALIGNMENT 38 YS2-11f12.q1k vc_7 218 255 13525 13562 F 38 100.00 255 reject_low 6 ALIGNMENT 41 YS2-11f12.q1k vc_3 255 215 2472 2512 C 41 100.00 255 reject_low 3 ALIGNMENT 0 YS2-11f12.q1k vc_4 62 214 5831 5830 F 153 0.00 255 reject_low 4 ALIGNMENT 41 YS2-11f12.q1k vc_4 215 255 5831 5871 F 41 100.00 255 reject_low 4 ALIGNMENT 36 YS2-11f12.q1k vc_5 252 217 1 36 C 36 100.00 255 reject_low 7 ALIGNMENT 41 YS2-11f12.q1k vc_1 255 215 2472 2512 C 41 100.00 255 reject_low 2 ALIGNMENT 0 YS2-11f12.q1k vc_7 62 217 13525 13524 F 156 0.00 255 reject_low 6 ALIGNMENT 0 YS2-11f12.q1k chr10 216 255 54154 54153 F 40 0.00 255 accept_chi 1 ALIGNMENT 0 YS2-11f12.p1k chr10 221 203 53978 53977 C 19 0.00 221 accept_chi 0 ALIGNMENT 309 YS2-11f13.p1k chr07 501 130 931173 931543 C 372 95.97 1294 reject_low 36 ALIGNMENT 145 YS2-11f13.q1k chr14 893 735 96451 96609 C 159 98.11 1167 reject_low 40 ALIGNMENT 0 YS2-11f13.p1k chr14 501 931 561978 561977 F 431 0.00 1294 reject_low 21 ALIGNMENT 343 YS2-11f13.p1k chr08 130 500 91387 91757 F 371 98.92 1294 reject_low 23 ALIGNMENT 0 YS2-11f13.p1k chr15 419 418 704062 710027 F 0 0.00 1294 reject_low 41 ALIGNMENT 0 YS2-11f13.p1k chr15 77 128 703772 703771 F 52 0.00 1294 reject_low 41 ALIGNMENT 0 YS2-11f13.q1k chr08 522 62 91758 91757 C 461 0.00 1167 reject_low 9 ALIGNMENT 0 YS2-11f13.q1k vc_7 1003 62 2728 2727 C 942 0.00 1167 reject_low 2 ALIGNMENT 0 YS2-11f13.p1k chr14 289 931 96609 96608 F 643 0.00 1294 reject_low 39 ALIGNMENT 0 YS2-11f13.q1k chr13 522 62 504141 504140 C 461 0.00 1167 reject_low 17 ALIGNMENT 0 YS2-11f13.p1k chr05 128 77 354728 354727 C 52 0.00 1294 reject_low 32 ALIGNMENT 0 YS2-11f13.p1k chr08 77 129 91387 91386 F 53 0.00 1294 reject_low 23 ALIGNMENT 355 YS2-11f13.p1k chr10 130 500 197464 197834 F 371 100.00 1294 reject_low 8 ALIGNMENT 88 YS2-11f13.q1k vc_4 1004 1136 6353 6483 F 133 89.47 1167|1,0 reject_low 5 ALIGNMENT 0 YS2-11f13.p1k chr02 129 77 643854 643853 C 53 0.00 1294 reject_low 28 ALIGNMENT 88 YS2-11f13.q1k vc_7 1136 1004 2597 2727 C 133 89.47 1167 reject_low 2 ALIGNMENT 340 YS2-11f13.p1k chr07 130 500 110859 111229 F 371 98.65 1294 reject_low 26 ALIGNMENT 884 YS2-11f13.q1k chr09 28 960 196154 197088 F 933 99.68 1167 accept_chi 0 ALIGNMENT 0 YS2-11f13.p1k chr04 77 129 437146 437145 F 53 0.00 1294 reject_low 34 ALIGNMENT 0 YS2-11f13.p1k chr14 129 77 632492 632491 C 53 0.00 1294 reject_low 30 ALIGNMENT 0 YS2-11f13.p1k chr13 129 77 808906 808905 C 53 0.00 1294 reject_low 12 ALIGNMENT 0 YS2-11f13.p1k chr02 931 501 35849 35848 C 431 0.00 1294 reject_low 14 ALIGNMENT 345 YS2-11f13.q1k chr14 896 523 561605 561978 C 374 98.93 1167 reject_low 22 ALIGNMENT 32 YS2-11f13.q1k vc_4 964 1004 5831 5871 F 41 95.12 1167 reject_low 5 ALIGNMENT 0 YS2-11f13.p1k chr02 127 77 36221 36220 C 51 0.00 1294 reject_low 14 ALIGNMENT 68 YS2-11f13.q1k vc_4 1093 1004 1446 1534 C 90 92.22 1167 reject_low 11 ALIGNMENT 0 YS2-11f13.p1k chr13 77 127 503768 503767 F 51 0.00 1294 reject_low 15 ALIGNMENT 357 YS2-11f13.p1k chr13 128 500 503768 504140 F 373 100.00 1294 reject_low 15 ALIGNMENT 334 YS2-11f13.q1k chr14 523 893 632121 632491 F 371 98.11 1167 reject_low 31 ALIGNMENT 343 YS2-11f13.q1k chr16 523 893 442739 443109 F 371 98.92 1167 reject_low 25 ALIGNMENT 343 YS2-11f13.q1k chr16 523 893 436887 437257 F 371 98.92 1167 reject_low 10 ALIGNMENT 0 YS2-11f13.q1k vc_4 1003 62 1535 1534 C 942 0.00 1167 reject_low 11 ALIGNMENT 145 YS2-11f13.p1k vc_7 1014 1293 13562 13842 F 280 85.36 1294 reject_low 4 ALIGNMENT 0 YS2-11f13.q1k chr07 522 62 111230 111229 C 461 0.00 1167 reject_low 27 ALIGNMENT 329 YS2-11f13.p1k chr13 508 130 808527 808905 C 379 97.36 1294 reject_low 12 ALIGNMENT 355 YS2-11f13.q1k chr10 893 523 197464 197834 C 371 100.00 1167 reject_low 20 ALIGNMENT 0 YS2-11f13.p1k chr08 77 126 85532 85531 F 50 0.00 1294 reject_low 9 ALIGNMENT 88 YS2-11f13.q1k vc_4 1136 1004 5682 5812 C 133 89.47 1167 reject_low 7 ALIGNMENT 0 YS2-11f13.q1k chr15 605 606 704061 710026 C 0 0.00 1167 reject_low 42 ALIGNMENT 332 YS2-11f13.q1k chr05 523 894 354356 354727 F 372 97.85 1167 reject_low 33 ALIGNMENT 357 YS2-11f13.q1k chr02 523 895 35848 36220 F 373 100.00 1167 reject_low 16 ALIGNMENT 0 YS2-11f13.q1k chr10 522 62 203690 203689 C 461 0.00 1167 reject_low 8 ALIGNMENT 0 YS2-11f13.q1k chr05 62 522 354356 354355 F 461 0.00 1167 reject_low 33 ALIGNMENT 348 YS2-11f13.p1k chr08 127 500 85532 85905 F 374 99.20 1294 reject_low 9 ALIGNMENT 0 YS2-11f13.q1k chr02 62 522 35848 35847 F 461 0.00 1167 reject_low 16 ALIGNMENT 266 YS2-11f13.p1k chr15 129 420 703772 704063 F 292 98.29 1294|0,2 reject_low 41 ALIGNMENT 0 YS2-11f13.p1k chr16 931 501 442740 442739 C 431 0.00 1294 reject_low 10 ALIGNMENT 0 YS2-11f13.p1k chr14 77 126 561605 561604 F 50 0.00 1294 reject_low 21 ALIGNMENT 0 YS2-11f13.p1k chr10 501 931 203689 203688 F 431 0.00 1294 reject_low 19 ALIGNMENT 0 YS2-11f13.q1k chr10 522 62 197835 197834 C 461 0.00 1167 reject_low 20 ALIGNMENT 343 YS2-11f13.p1k chr16 500 130 436887 437257 C 371 98.92 1294 reject_low 24 ALIGNMENT 334 YS2-11f13.p1k chr14 500 130 632121 632491 C 371 98.11 1294 reject_low 30 ALIGNMENT 345 YS2-11f13.p1k chr14 127 500 561605 561978 F 374 98.93 1294 reject_low 21 ALIGNMENT 337 YS2-11f13.p1k chr02 500 130 643483 643853 C 371 98.38 1294 reject_low 28 ALIGNMENT 0 YS2-11f13.p1k chr07 77 129 110859 110858 F 53 0.00 1294 reject_low 26 ALIGNMENT 0 YS2-11f13.q1k chr15 522 62 710109 710108 C 461 0.00 1167 reject_low 42 ALIGNMENT 340 YS2-11f13.q1k chr07 893 523 110859 111229 C 371 98.65 1167 reject_low 27 ALIGNMENT 0 YS2-11f13.p1k vc_1 1013 77 2473 2472 C 937 0.00 1294 reject_low 38 ALIGNMENT 0 YS2-11f13.p1k chr07 129 77 931544 931543 C 53 0.00 1294 reject_low 36 ALIGNMENT 0 YS2-11f13.q1k chr16 62 522 436887 436886 F 461 0.00 1167 reject_low 10 ALIGNMENT 357 YS2-11f13.p1k chr02 500 128 35848 36220 C 373 100.00 1294 reject_low 14 ALIGNMENT 145 YS2-11f13.p1k vc_7 1014 1293 100 380 F 280 85.36 1294 reject_low 2 ALIGNMENT 0 YS2-11f13.p1k chr16 129 77 437258 437257 C 53 0.00 1294 reject_low 24 ALIGNMENT 0 YS2-11f13.q1k vc_4 62 1003 126 125 F 942 0.00 1167 reject_low 6 ALIGNMENT 0 YS2-11f13.p1k chr08 501 931 85905 85904 F 431 0.00 1294 reject_low 9 ALIGNMENT 0 YS2-11f13.q1k chr14 734 62 96610 96609 C 673 0.00 1167 reject_low 40 ALIGNMENT 0 YS2-11f13.p1k chr14 77 129 96451 96450 F 53 0.00 1294 reject_low 39 ALIGNMENT 0 YS2-11f13.p1k chr10 77 129 203319 203318 F 53 0.00 1294 reject_low 19 ALIGNMENT 0 YS2-11f13.p1k chr13 931 509 808528 808527 C 423 0.00 1294 reject_low 12 ALIGNMENT 0 YS2-11f13.p1k chr08 501 931 91757 91756 F 431 0.00 1294 reject_low 23 ALIGNMENT 348 YS2-11f13.q1k chr08 896 523 85532 85905 C 374 99.20 1167 reject_low 18 ALIGNMENT 309 YS2-11f13.q1k chr07 522 893 931173 931543 F 372 95.97 1167 reject_low 37 ALIGNMENT 337 YS2-11f13.q1k chr02 523 893 643483 643853 F 371 98.38 1167 reject_low 29 ALIGNMENT 355 YS2-11f13.q1k chr10 893 523 203319 203689 C 371 100.00 1167 reject_low 8 ALIGNMENT 0 YS2-11f13.q1k chr07 62 521 931173 931172 F 460 0.00 1167 reject_low 37 ALIGNMENT 312 YS2-11f13.q1k chr04 893 522 437146 437516 C 372 96.24 1167 reject_low 35 ALIGNMENT 0 YS2-11f13.p1k chr10 77 129 197464 197463 F 53 0.00 1294 reject_low 8 ALIGNMENT 0 YS2-11f13.q1k chr14 522 62 561979 561978 C 461 0.00 1167 reject_low 22 ALIGNMENT 355 YS2-11f13.p1k chr10 130 500 203319 203689 F 371 100.00 1294 reject_low 19 ALIGNMENT 343 YS2-11f13.p1k chr16 500 130 442739 443109 C 371 98.92 1294 reject_low 10 ALIGNMENT 145 YS2-11f13.p1k vc_1 1293 1014 1825 2105 C 280 85.36 1294 reject_low 3 ALIGNMENT 0 YS2-11f13.q1k chr02 62 522 643483 643482 F 461 0.00 1167 reject_low 29 ALIGNMENT 0 YS2-11f13.p1k chr02 931 501 643484 643483 C 431 0.00 1294 reject_low 28 ALIGNMENT 266 YS2-11f13.q1k chr15 894 603 703772 704063 C 292 98.29 1167|0,3 reject_low 42 ALIGNMENT 0 YS2-11f13.p1k vc_1 1013 77 2106 2105 C 937 0.00 1294 reject_low 3 ALIGNMENT 329 YS2-11f13.q1k chr13 515 893 808527 808905 F 379 97.36 1167 reject_low 13 ALIGNMENT 88 YS2-11f13.q1k vc_4 1004 1136 126 256 F 133 89.47 1167 reject_low 6 ALIGNMENT 312 YS2-11f13.p1k chr04 130 501 437146 437516 F 372 96.24 1294 reject_low 34 ALIGNMENT 0 YS2-11f13.p1k chr16 129 77 443110 443109 C 53 0.00 1294 reject_low 10 ALIGNMENT 26 YS2-11f13.p1k vc_1 1044 1014 2441 2472 C 31 96.77 1294 reject_low 38 ALIGNMENT 332 YS2-11f13.p1k chr05 500 129 354356 354727 C 372 97.85 1294 reject_low 32 ALIGNMENT 0 YS2-11f13.q1k vc_4 62 963 5831 5830 F 902 0.00 1167 reject_low 5 ALIGNMENT 0 YS2-11f13.p1k chr13 501 931 504140 504139 F 431 0.00 1294 reject_low 15 ALIGNMENT 0 YS2-11f13.p1k chr04 502 931 437516 437515 F 430 0.00 1294 reject_low 34 ALIGNMENT 0 YS2-11f13.p1k chr14 931 501 632122 632121 C 431 0.00 1294 reject_low 30 ALIGNMENT 0 YS2-11f13.p1k chr05 931 501 354357 354356 C 431 0.00 1294 reject_low 32 ALIGNMENT 0 YS2-11f13.p1k vc_7 77 1013 100 99 F 937 0.00 1294 reject_low 2 ALIGNMENT 57 YS2-11f13.p1k chr15 416 500 710025 710108 F 85 94.12 1294|3,0 reject_low 41 ALIGNMENT 0 YS2-11f13.q1k chr16 62 522 442739 442738 F 461 0.00 1167 reject_low 25 ALIGNMENT 0 YS2-11f13.q1k chr08 522 62 85906 85905 C 461 0.00 1167 reject_low 18 ALIGNMENT 57 YS2-11f13.q1k chr15 607 523 710025 710108 C 85 94.12 1167|2,0 reject_low 42 ALIGNMENT 0 YS2-11f13.p1k chr10 501 931 197834 197833 F 431 0.00 1294 reject_low 8 ALIGNMENT 0 YS2-11f13.p1k vc_7 77 1013 13562 13561 F 937 0.00 1294 reject_low 4 ALIGNMENT 0 YS2-11f13.q1k chr14 62 522 632121 632120 F 461 0.00 1167 reject_low 31 ALIGNMENT 0 YS2-11f13.p1k chr16 931 501 436888 436887 C 431 0.00 1294 reject_low 24 ALIGNMENT 343 YS2-11f13.q1k chr08 893 523 91387 91757 C 371 98.92 1167 reject_low 9 ALIGNMENT 875 YS2-11f13.p1k chr09 996 58 196154 197092 C 939 99.15 1294 accept_chi 1 ALIGNMENT 0 YS2-11f13.p1k chr07 501 931 111229 111228 F 431 0.00 1294 reject_low 26 ALIGNMENT 0 YS2-11f13.p1k chr15 501 931 710108 710107 F 431 0.00 1294 reject_low 41 ALIGNMENT 145 YS2-11f13.p1k chr14 130 288 96451 96609 F 159 98.11 1294 reject_low 39 ALIGNMENT 357 YS2-11f13.q1k chr13 895 523 503768 504140 C 373 100.00 1167 reject_low 17 ALIGNMENT 0 YS2-11f13.q1k chr04 521 62 437517 437516 C 460 0.00 1167 reject_low 35 ALIGNMENT 0 YS2-11f13.q1k vc_4 1003 62 5813 5812 C 942 0.00 1167 reject_low 7 ALIGNMENT 0 YS2-11f13.q1k vc_4 1005 1004 5872 6353 F 0 0.00 1167 reject_low 5 ALIGNMENT 0 YS2-11f13.p1k chr07 931 502 931174 931173 C 430 0.00 1294 reject_low 36 ALIGNMENT 0 YS2-11f13.q1k chr13 62 514 808527 808526 F 453 0.00 1167 reject_low 13 ALIGNMENT 1055 YS2-11f15.p1k chr04 1258 33 103916 105151 C 1226 95.84 1272 accept_chi 0 ALIGNMENT 1007 YS2-11f15.q1k chr04 29 1134 1198083 1199190 F 1106 98.01 1134 accept_chi 1 ALIGNMENT 0 YS2-11f16.p1k chr03 708 689 151519 151518 C 20 0.00 708 reject_low 44 ALIGNMENT 0 YS2-11f16.p1k chr05 62 351 135603 135602 F 290 0.00 708 reject_low 23 ALIGNMENT 0 YS2-11f16.p1k chr10 708 66 538293 538292 C 643 0.00 708 reject_low 34 ALIGNMENT 0 YS2-11f16.p1k chr05 689 708 135939 135938 F 20 0.00 708 reject_low 23 ALIGNMENT 325 YS2-11f16.p1k chr12 355 708 976252 976605 F 354 99.44 708 reject_low 5 ALIGNMENT 31 YS2-11f16.p1k chr03 65 28 90712 90750 C 38 97.37 708 reject_low 33 ALIGNMENT 95 YS2-11f16.p1k chr09 367 688 197146 197485 F 322 79.81 708 reject_low 43 ALIGNMENT 950 YS2-11f16.q1k chr04 33 1099 873235 874298 F 1067 97.66 1160 reject_low 7 ALIGNMENT 27 YS2-11f16.p1k chr04 648 530 1352962 1353079 C 119 78.15 708 reject_low 55 ALIGNMENT 0 YS2-11f16.p1k chr04 359 62 987121 987120 C 298 0.00 708 reject_low 8 ALIGNMENT 94 YS2-11f16.p1k chr03 688 367 151518 151838 C 322 80.12 708 reject_low 44 ALIGNMENT 0 YS2-11f16.p1k chr04 62 379 987167 987166 F 318 0.00 708 reject_low 41 ALIGNMENT 303 YS2-11f16.p1k chr16 689 356 62388 62721 C 334 99.10 708 reject_low 25 ALIGNMENT 269 YS2-11f16.p1k chr03 367 689 168605 168929 F 323 96.90 708 reject_low 32 ALIGNMENT 332 YS2-11f16.p1k chr07 351 708 568739 569096 F 358 99.72 708 reject_low 1 ALIGNMENT 308 YS2-11f16.p1k chr05 352 688 135603 135939 F 337 99.41 708 reject_low 23 ALIGNMENT 445 YS2-11f16.p1k chr07 27 688 110819 111509 F 662 91.39 708 reject_low 10 ALIGNMENT 0 YS2-11f16.p1k chr16 708 638 62727 62726 C 71 0.00 708 reject_low 48 ALIGNMENT 320 YS2-11f16.p1k chr03 708 354 90417 90771 C 355 98.87 708 reject_low 3 ALIGNMENT 0 YS2-11f16.p1k chr09 356 62 246550 246549 C 295 0.00 708 reject_low 31 ALIGNMENT 158 YS2-11f16.q1k chr01 1025 245 163734 164515 C 781 74.39 1160 reject_low 15 ALIGNMENT 0 YS2-11f16.p1k chr01 689 708 166163 166162 F 20 0.00 708 reject_low 40 ALIGNMENT 0 YS2-11f16.p1k chr16 537 62 62827 62826 C 476 0.00 708 reject_low 48 ALIGNMENT 0 YS2-11f16.p1k chr04 359 62 1352963 1352962 C 298 0.00 708 reject_low 27 ALIGNMENT 0 YS2-11f16.p1k chr04 532 708 987320 987319 F 177 0.00 708 reject_low 41 ALIGNMENT 0 YS2-11f16.q1k chr10 62 244 474026 474025 F 183 0.00 1160 reject_low 22 ALIGNMENT 318 YS2-11f16.p1k chr12 708 357 946796 947147 C 352 98.86 708 reject_low 4 ALIGNMENT 953 YS2-11f16.q1k chr15 1099 33 707541 708604 C 1067 97.75 1160 accept_trans 0 ALIGNMENT 30 YS2-11f16.p1k chr15 34 65 704089 704120 F 32 100.00 708 reject_low 37 ALIGNMENT 0 YS2-11f16.p1k chr04 708 649 1352963 1352962 C 60 0.00 708 reject_low 55 ALIGNMENT 0 YS2-11f16.p1k chr04 529 62 1353080 1353079 C 468 0.00 708 reject_low 55 ALIGNMENT 0 YS2-11f16.p1k chr12 62 354 976252 976251 F 293 0.00 708 reject_low 5 ALIGNMENT 38 YS2-11f16.p1k chr15 448 367 703670 703753 C 82 85.37 708 reject_low 51 ALIGNMENT 0 YS2-11f16.p1k chr03 379 62 149785 149784 C 318 0.00 708 reject_low 45 ALIGNMENT 28 YS2-11f16.p1k chr07 366 413 110811 110858 F 48 89.58 708 reject_low 54 ALIGNMENT 323 YS2-11f16.p1k chr15 708 361 975889 976236 C 348 99.71 708 reject_low 6 ALIGNMENT 0 YS2-11f16.p1k chr06 708 66 143811 143810 C 643 0.00 708 reject_low 38 ALIGNMENT 223 YS2-11f16.p1k chr01 367 708 160249 160595 F 342 90.94 708 reject_low 15 ALIGNMENT 0 YS2-11f16.p1k chr15 360 62 976237 976236 C 299 0.00 708 reject_low 6 ALIGNMENT 28 YS2-11f16.p1k chr06 65 28 143810 143848 C 38 94.74 708 reject_low 38 ALIGNMENT 298 YS2-11f16.p1k chr12 688 357 941189 941520 C 332 98.80 708 reject_low 56 ALIGNMENT 955 YS2-11f16.q1k chr02 31 1099 31058 32123 F 1069 97.75 1160 reject_low 14 ALIGNMENT 0 YS2-11f16.q1k chr05 244 62 447669 447668 C 183 0.00 1160 reject_low 17 ALIGNMENT 32 YS2-11f16.p1k chr06 424 367 143869 143927 C 58 89.66 708 reject_low 53 ALIGNMENT 0 YS2-11f16.p1k chr04 613 708 877963 877962 F 96 0.00 708 reject_low 52 ALIGNMENT 964 YS2-11f16.q1k chr03 31 1099 86227 87292 F 1069 98.04 1160 reject_low 3 ALIGNMENT 0 YS2-11f16.p1k chr01 62 366 160249 160248 F 305 0.00 708 reject_low 15 ALIGNMENT 59 YS2-11f16.p1k chr03 413 688 142803 143077 F 276 77.17 708 reject_low 47 ALIGNMENT 0 YS2-11f16.q1k chr14 244 62 100881 100880 C 183 0.00 1160 reject_low 20 ALIGNMENT 0 YS2-11f16.q1k chr13 62 244 185813 185812 F 183 0.00 1160 reject_low 18 ALIGNMENT 179 YS2-11f16.q1k chr13 245 1067 197980 198800 F 823 74.97 1160 reject_low 19 ALIGNMENT 71 YS2-11f16.p1k chr03 655 380 149513 149784 C 276 78.99 708 reject_low 45 ALIGNMENT 0 YS2-11f16.q1k chr10 604 666 479969 480031 F 63 0.00 1160 reject_low 57 ALIGNMENT 0 YS2-11f16.p1k chr04 359 62 877772 877771 C 298 0.00 708 reject_low 7 ALIGNMENT 0 YS2-11f16.p1k chr12 356 62 947148 947147 C 295 0.00 708 reject_low 4 ALIGNMENT 0 YS2-11f16.p1k chr10 656 708 537948 537947 F 53 0.00 708 reject_low 50 ALIGNMENT 0 YS2-11f16.p1k chr07 539 62 111636 111635 C 478 0.00 708 reject_low 49 ALIGNMENT 552 YS2-11f16.p1k chr15 66 708 703773 704416 F 643 96.89 708 accept_trans 0 ALIGNMENT 179 YS2-11f16.q1k chr13 245 1067 185813 186633 F 823 74.97 1160 reject_low 18 ALIGNMENT 0 YS2-11f16.p1k chr16 708 690 62389 62388 C 19 0.00 708 reject_low 25 ALIGNMENT 304 YS2-11f16.p1k chr04 688 360 1352634 1352962 C 329 99.70 708 reject_low 27 ALIGNMENT 173 YS2-11f16.q1k chr10 245 1067 474026 474846 F 823 74.73 1160 reject_low 22 ALIGNMENT 263 YS2-11f16.p1k chr09 356 66 196730 197020 C 291 97.94 708 reject_low 9 ALIGNMENT 292 YS2-11f16.p1k chr07 688 360 811452 811780 C 329 98.48 708 reject_low 30 ALIGNMENT 120 YS2-11f16.p1k chr04 380 531 987167 987320 F 152 96.05 708 reject_low 41 ALIGNMENT 0 YS2-11f16.p1k chr04 359 62 981494 981493 C 298 0.00 708 reject_low 26 ALIGNMENT 964 YS2-11f16.q1k chr14 1099 31 565510 566575 C 1069 98.04 1160 reject_low 13 ALIGNMENT 0 YS2-11f16.p1k chr07 62 350 568739 568738 F 289 0.00 708 reject_low 1 ALIGNMENT 973 YS2-11f16.q1k chr06 31 1099 139325 140390 F 1069 98.32 1160 reject_low 2 ALIGNMENT 35 YS2-11f16.p1k chr04 429 612 877782 877963 F 184 77.17 708 reject_low 52 ALIGNMENT 31 YS2-11f16.p1k chr12 65 28 947091 947129 C 38 97.37 708 reject_low 56 ALIGNMENT 0 YS2-11f16.p1k chr07 708 659 111518 111517 C 50 0.00 708 reject_low 49 ALIGNMENT 296 YS2-11f16.p1k chr10 688 356 538017 538349 C 333 98.50 708 reject_low 28 ALIGNMENT 0 YS2-11f16.p1k chr03 708 66 90713 90712 C 643 0.00 708 reject_low 33 ALIGNMENT 0 YS2-11f16.p1k chr06 359 62 143864 143863 C 298 0.00 708 reject_low 2 ALIGNMENT 42 YS2-11f16.p1k chr07 658 540 111517 111635 C 119 80.67 708 reject_low 49 ALIGNMENT 0 YS2-11f16.q1k chr10 62 244 479610 479609 F 183 0.00 1160 reject_low 57 ALIGNMENT 0 YS2-11f16.p1k chr16 708 538 62191 62190 C 171 0.00 708 reject_low 46 ALIGNMENT 0 YS2-11f16.q1k chr08 244 62 547881 547880 C 183 0.00 1160 reject_low 21 ALIGNMENT 0 YS2-11f16.p1k chr06 708 425 143870 143869 C 284 0.00 708 reject_low 53 ALIGNMENT 0 YS2-11f16.p1k chr15 708 689 970283 970282 C 20 0.00 708 reject_low 29 ALIGNMENT 304 YS2-11f16.p1k chr04 688 360 981165 981493 C 329 99.70 708 reject_low 26 ALIGNMENT 67 YS2-11f16.p1k chr16 537 367 62190 62365 C 171 83.04 708 reject_low 46 ALIGNMENT 0 YS2-11f16.p1k chr03 708 656 149514 149513 C 53 0.00 708 reject_low 45 ALIGNMENT 0 YS2-11f16.p1k chr15 66 708 704120 704119 F 643 0.00 708 reject_low 37 ALIGNMENT 0 YS2-11f16.p1k chr06 366 62 143928 143927 C 305 0.00 708 reject_low 53 ALIGNMENT 0 YS2-11f16.p1k chr03 366 62 151839 151838 C 305 0.00 708 reject_low 44 ALIGNMENT 0 YS2-11f16.p1k chr09 708 357 196731 196730 C 352 0.00 708 reject_low 9 ALIGNMENT 173 YS2-11f16.q1k chr08 1067 245 547060 547880 C 823 74.73 1160 reject_low 21 ALIGNMENT 967 YS2-11f16.q1k chr12 31 1099 942606 943671 F 1069 98.13 1160 reject_low 4 ALIGNMENT 0 YS2-11f16.p1k chr09 62 366 197146 197145 F 305 0.00 708 reject_low 43 ALIGNMENT 0 YS2-11f16.q1k chr02 62 244 222685 222684 F 183 0.00 1160 reject_low 16 ALIGNMENT 0 YS2-11f16.p1k chr12 708 66 941465 941464 C 643 0.00 708 reject_low 35 ALIGNMENT 96 YS2-11f16.p1k chr03 367 688 124141 124462 F 322 80.12 708 reject_low 42 ALIGNMENT 0 YS2-11f16.p1k chr03 690 708 168929 168928 F 19 0.00 708 reject_low 32 ALIGNMENT 0 YS2-11f16.p1k chr07 359 62 811781 811780 C 298 0.00 708 reject_low 30 ALIGNMENT 0 YS2-11f16.p1k chr07 689 708 111509 111508 F 20 0.00 708 reject_low 10 ALIGNMENT 204 YS2-11f16.p1k chr01 367 688 165837 166163 F 322 90.37 708 reject_low 40 ALIGNMENT 182 YS2-11f16.q1k chr02 245 1067 222685 223505 F 823 75.09 1160 reject_low 16 ALIGNMENT 950 YS2-11f16.q1k chr15 33 1099 971701 972764 F 1067 97.66 1160 reject_low 6 ALIGNMENT 182 YS2-11f16.q1k chr05 1067 245 446848 447668 C 823 75.09 1160 reject_low 17 ALIGNMENT 0 YS2-11f16.p1k chr03 62 412 142803 142802 F 351 0.00 708 reject_low 47 ALIGNMENT 43 YS2-11f16.p1k chr16 637 538 62726 62826 C 100 84.00 708 reject_low 48 ALIGNMENT 967 YS2-11f16.q1k chr04 1099 31 517161 518226 C 1069 98.13 1160 reject_low 12 ALIGNMENT 0 YS2-11f16.q1k chr01 244 62 164516 164515 C 183 0.00 1160 reject_low 15 ALIGNMENT 0 YS2-11f16.p1k chr15 363 62 970607 970606 C 302 0.00 708 reject_low 29 ALIGNMENT 0 YS2-11f16.p1k chr07 414 708 110858 110857 F 295 0.00 708 reject_low 54 ALIGNMENT 944 YS2-11f16.q1k chr04 33 1099 982584 983647 F 1067 97.47 1160 reject_low 8 ALIGNMENT 176 YS2-11f16.q1k chr14 1067 245 100060 100880 C 823 74.85 1160 reject_low 20 ALIGNMENT 0 YS2-11f16.p1k chr16 366 62 62366 62365 C 305 0.00 708 reject_low 46 ALIGNMENT 31 YS2-11f16.p1k chr10 65 28 538292 538330 C 38 97.37 708 reject_low 34 ALIGNMENT 953 YS2-11f16.q1k chr12 1099 33 979214 980277 C 1067 97.75 1160 reject_low 5 ALIGNMENT 0 YS2-11f16.p1k chr07 708 66 811728 811727 C 643 0.00 708 reject_low 39 ALIGNMENT 0 YS2-11f16.p1k chr15 708 449 703671 703670 C 260 0.00 708 reject_low 51 ALIGNMENT 973 YS2-11f16.q1k chr07 31 1099 812869 813934 F 1069 98.32 1160 reject_low 11 ALIGNMENT 312 YS2-11f16.p1k chr06 708 360 143515 143863 C 349 98.57 708 reject_low 2 ALIGNMENT 0 YS2-11f16.p1k chr12 708 689 941190 941189 C 20 0.00 708 reject_low 56 ALIGNMENT 0 YS2-11f16.p1k chr01 62 366 165837 165836 F 305 0.00 708 reject_low 40 ALIGNMENT 0 YS2-11f16.p1k chr10 62 537 537832 537831 F 476 0.00 708 reject_low 50 ALIGNMENT 0 YS2-11f16.p1k chr12 356 66 941521 947090 C 291 0.00 708 reject_low 56 ALIGNMENT 0 YS2-11f16.p1k chr09 708 689 246218 246217 C 20 0.00 708 reject_low 31 ALIGNMENT 0 YS2-11f16.p1k chr04 708 689 981166 981165 C 20 0.00 708 reject_low 26 ALIGNMENT 0 YS2-11f16.p1k chr07 62 365 110811 110810 F 304 0.00 708 reject_low 54 ALIGNMENT 30 YS2-11f16.p1k chr09 65 34 246493 246524 C 32 100.00 708 reject_low 36 ALIGNMENT 300 YS2-11f16.p1k chr15 688 364 970282 970606 C 325 99.69 708 reject_low 29 ALIGNMENT 85 YS2-11f16.q1k chr10 245 603 479610 479968 F 359 75.77 1160 reject_low 57 ALIGNMENT 0 YS2-11f16.p1k chr03 689 708 124462 124461 F 20 0.00 708 reject_low 42 ALIGNMENT 0 YS2-11f16.p1k chr09 689 708 197485 197484 F 20 0.00 708 reject_low 43 ALIGNMENT 273 YS2-11f16.p1k chr09 688 357 246217 246549 C 332 96.39 708 reject_low 31 ALIGNMENT 22 YS2-11f16.q1k chr10 667 707 480032 480072 F 41 85.37 1160 reject_low 57 ALIGNMENT 324 YS2-11f16.p1k chr04 708 360 986772 987120 C 349 99.71 708 reject_low 8 ALIGNMENT 0 YS2-11f16.p1k chr04 62 428 877782 877781 F 367 0.00 708 reject_low 52 ALIGNMENT 0 YS2-11f16.p1k chr03 689 708 143077 143076 F 20 0.00 708 reject_low 47 ALIGNMENT 0 YS2-11f16.p1k chr15 366 62 703754 703753 C 305 0.00 708 reject_low 51 ALIGNMENT 0 YS2-11f16.q1k chr10 708 899 480072 480071 F 192 0.00 1160 reject_low 57 ALIGNMENT 0 YS2-11f16.p1k chr04 708 689 1352635 1352634 C 20 0.00 708 reject_low 27 ALIGNMENT 28 YS2-11f16.p1k chr07 65 28 811727 811765 C 38 94.74 708 reject_low 39 ALIGNMENT 321 YS2-11f16.p1k chr04 708 360 877423 877771 C 349 99.43 708 reject_low 7 ALIGNMENT 976 YS2-11f16.q1k chr07 1099 31 572222 573287 C 1069 98.41 1160 reject_low 1 ALIGNMENT 0 YS2-11f16.p1k chr09 708 66 246494 246493 C 643 0.00 708 reject_low 36 ALIGNMENT 31 YS2-11f16.p1k chr12 65 28 941464 941502 C 38 97.37 708 reject_low 35 ALIGNMENT 0 YS2-11f16.p1k chr07 708 689 811453 811452 C 20 0.00 708 reject_low 30 ALIGNMENT 0 YS2-11f16.p1k chr10 355 62 538350 538349 C 294 0.00 708 reject_low 28 ALIGNMENT 0 YS2-11f16.q1k chr13 62 244 197980 197979 F 183 0.00 1160 reject_low 19 ALIGNMENT 0 YS2-11f16.q1k chr07 183 62 566181 566180 C 122 0.00 1160 reject_low 24 ALIGNMENT 0 YS2-11f16.p1k chr03 62 366 168605 168604 F 305 0.00 708 reject_low 32 ALIGNMENT 42 YS2-11f16.p1k chr10 538 655 537832 537948 F 118 81.36 708 reject_low 50 ALIGNMENT 155 YS2-11f16.q1k chr07 1026 184 565338 566180 C 843 73.78 1160 reject_low 24 ALIGNMENT 0 YS2-11f16.p1k chr10 708 689 538018 538017 C 20 0.00 708 reject_low 28 ALIGNMENT 0 YS2-11f16.p1k chr16 355 62 62722 62721 C 294 0.00 708 reject_low 25 ALIGNMENT 0 YS2-11f16.p1k chr03 62 366 124141 124140 F 305 0.00 708 reject_low 42 ALIGNMENT 0 YS2-11f16.p1k chr03 353 62 90772 90771 C 292 0.00 708 reject_low 3 ALIGNMENT 927 YS2-11f17.p1k chr03 36 1140 210790 211882 F 1105 95.75 1274 accept 0 ALIGNMENT 995 YS2-11f17.q1k chr03 1135 29 215078 216178 C 1107 97.38 1144 accept 0 ALIGNMENT 0 YS2-11f18.q1k chr15 592 62 237025 237024 C 531 0.00 1136 reject_low 2 ALIGNMENT 0 YS2-11f18.q1k chr14 625 792 720313 720312 F 168 0.00 1136 reject_low 3 ALIGNMENT 0 YS2-11f18.q1k chr14 62 586 720276 720275 F 525 0.00 1136 reject_low 3 ALIGNMENT 22 YS2-11f18.q1k chr02 672 581 780350 780441 C 92 83.70 1136 reject_low 1 ALIGNMENT 21 YS2-11f18.q1k chr14 587 624 720276 720313 F 38 94.74 1136 reject_low 3 ALIGNMENT 971 YS2-11f18.p1k chr16 1134 31 382704 383814 C 1104 96.83 1251 accept 0 ALIGNMENT 0 YS2-11f18.q1k chr02 580 62 780442 780441 C 519 0.00 1136 reject_low 1 ALIGNMENT 0 YS2-11f18.q1k chr02 792 673 780351 780350 C 120 0.00 1136 reject_low 1 ALIGNMENT 857 YS2-11f18.q1k chr16 36 1132 378843 379917 F 1097 94.80 1136 accept 0 ALIGNMENT 23 YS2-11f18.q1k chr15 653 593 236964 237024 C 61 91.80 1136 reject_low 2 ALIGNMENT 0 YS2-11f18.q1k chr15 792 654 236965 236964 C 139 0.00 1136 reject_low 2 ALIGNMENT 0 YS2-11f20.p1k chrm 660 942 32616 32615 F 283 0.00 1222 reject_low 8 ALIGNMENT 196 YS2-11f20.p1k vc_4 924 1220 5871 6176 F 297 89.90 1222 reject_low 5 ALIGNMENT 0 YS2-11f20.p1k vc_3 923 62 2106 2105 C 862 0.00 1222 reject_low 4 ALIGNMENT 0 YS2-11f20.p1k chrm 280 62 12783 12782 C 219 0.00 1222 reject_low 11 ALIGNMENT 0 YS2-11f20.p1k vc_7 62 923 13562 13561 F 862 0.00 1222 reject_low 7 ALIGNMENT 0 YS2-11f20.p1k vc_4 62 923 5871 5870 F 862 0.00 1222 reject_low 5 ALIGNMENT 0 YS2-11f20.p1k chrm 62 283 32232 32231 F 222 0.00 1222 reject_low 8 ALIGNMENT 97 YS2-11f20.p1k chrm 284 659 32232 32616 F 376 84.04 1222 reject_low 8 ALIGNMENT 0 YS2-11f20.q1k chrm 278 62 32617 32616 C 217 0.00 1176 reject_low 9 ALIGNMENT 0 YS2-11f20.q1k chrm 843 658 44925 44924 C 186 0.00 1176 reject_low 8 ALIGNMENT 196 YS2-11f20.p1k vc_1 1220 924 1800 2105 C 297 89.90 1222 reject_low 2 ALIGNMENT 0 YS2-11f20.p1k chrm 626 942 45300 45299 F 317 0.00 1222 reject_low 14 ALIGNMENT 0 YS2-11f20.q1k chrm 843 655 32233 32232 C 189 0.00 1176 reject_low 9 ALIGNMENT 0 YS2-11f20.p1k vc_3 923 62 2473 2472 C 862 0.00 1222 reject_low 13 ALIGNMENT 66 YS2-11f20.p1k chrm 413 625 45084 45300 F 213 86.85 1222 reject_low 14 ALIGNMENT 97 YS2-11f20.q1k chrm 654 279 32232 32616 C 376 84.04 1176 reject_low 9 ALIGNMENT 0 YS2-11f20.p1k chrm 942 906 54227 54226 C 37 0.00 1222 accept_chi 0 ALIGNMENT 37 YS2-11f20.p1k chrm 281 410 44924 45050 F 130 83.85 1222 reject_low 14 ALIGNMENT 37 YS2-11f20.q1k chrm 657 528 44924 45050 C 130 83.85 1176 reject_low 8 ALIGNMENT 196 YS2-11f20.p1k vc_3 1220 924 1800 2105 C 297 89.90 1222 reject_low 4 ALIGNMENT 26 YS2-11f20.p1k vc_3 954 924 2441 2472 C 31 96.77 1222 reject_low 13 ALIGNMENT 0 YS2-11f20.q1k chrm 658 843 4314 4313 F 186 0.00 1176 reject_low 11 ALIGNMENT 0 YS2-11f20.q1k chrm 62 266 12398 12397 F 205 0.00 1176 reject_low 10 ALIGNMENT 196 YS2-11f20.p1k vc_7 924 1220 100 405 F 297 89.90 1222 reject_low 6 ALIGNMENT 196 YS2-11f20.p1k vc_7 924 1220 13562 13867 F 297 89.90 1222 reject_low 7 ALIGNMENT 42 YS2-11f20.q1k chrm 533 657 4192 4314 F 125 85.60 1176 reject_low 11 ALIGNMENT 0 YS2-11f20.q1k chrm 527 526 45051 45083 C 2 0.00 1176 reject_low 8 ALIGNMENT 26 YS2-11f20.p1k vc_1 954 924 2441 2472 C 31 96.77 1222 reject_low 12 ALIGNMENT 36 YS2-11f20.q1k chrm 388 469 3655 3738 F 82 85.37 1176 reject_low 11 ALIGNMENT 579 YS2-11f20.q1k chrm 32 912 54226 55097 F 881 97.28 1176 accept_chi 1 ALIGNMENT 0 YS2-11f20.p1k vc_1 923 62 2473 2472 C 862 0.00 1222 reject_low 12 ALIGNMENT 66 YS2-11f20.q1k chrm 525 313 45084 45300 C 213 86.85 1176 reject_low 8 ALIGNMENT 0 YS2-11f20.q1k chrm 470 532 3739 4191 F 63 0.00 1176 reject_low 11 ALIGNMENT 0 YS2-11f20.p1k vc_1 923 62 2106 2105 C 862 0.00 1222 reject_low 2 ALIGNMENT 0 YS2-11f20.p1k chrm 411 412 45051 45083 F 2 0.00 1222 reject_low 14 ALIGNMENT 82 YS2-11f20.p1k chrm 671 281 12398 12782 C 391 84.14 1222 reject_low 11 ALIGNMENT 0 YS2-11f20.q1k chrm 658 843 12782 12781 F 186 0.00 1176 reject_low 10 ALIGNMENT 0 YS2-11f20.p1k chrm 62 280 44924 44923 F 219 0.00 1222 reject_low 14 ALIGNMENT 196 YS2-11f20.p1k vc_2 1220 924 1800 2105 C 297 89.90 1222 reject_low 3 ALIGNMENT 0 YS2-11f20.q1k chrm 62 387 3655 3654 F 326 0.00 1176 reject_low 11 ALIGNMENT 0 YS2-11f20.q1k chrm 312 62 45301 45300 C 251 0.00 1176 reject_low 8 ALIGNMENT 0 YS2-11f20.p1k vc_2 923 62 2106 2105 C 862 0.00 1222 reject_low 3 ALIGNMENT 0 YS2-11f20.p1k vc_7 62 923 100 99 F 862 0.00 1222 reject_low 6 ALIGNMENT 0 YS2-11f20.p1k chrm 942 672 12399 12398 C 271 0.00 1222 reject_low 11 ALIGNMENT 82 YS2-11f20.q1k chrm 267 657 12398 12782 F 391 84.14 1176 reject_low 10 ALIGNMENT 595 YS2-11f20.p1k chrm 905 25 54226 55097 C 881 97.96 1222 accept_chi 0 ALIGNMENT 967 YS2-11f22.q1k chr15 35 1075 861847 862886 F 1041 98.66 1084 accept 0 ALIGNMENT 1029 YS2-11f22.p1k chr15 1180 32 866866 868023 C 1149 97.56 1180 accept 0 ALIGNMENT 0 YS2-11f22.p1k chr13 204 62 733142 733141 C 143 0.00 1180 reject_low 1 ALIGNMENT 214 YS2-11f22.p1k chr13 473 205 732873 733141 C 269 94.05 1180 reject_low 1 ALIGNMENT 0 YS2-11f22.p1k chr13 905 474 732874 732873 C 432 0.00 1180 reject_low 1 ALIGNMENT 63 YS2-11f23.q1k chr16 723 649 794957 795031 C 75 96.00 1050 reject_low 1 ALIGNMENT 0 YS2-11f23.q1k chr16 871 724 794958 794957 C 148 0.00 1050 reject_low 1 ALIGNMENT 950 YS2-11f23.p1k chr07 30 1150 723703 724818 F 1121 95.90 1223 accept 0 ALIGNMENT 273 YS2-11f23.q1k chr16 337 28 795389 795699 C 310 96.45 1050 reject_low 1 ALIGNMENT 920 YS2-11f23.q1k chr07 1004 28 726693 727671 C 977 98.77 1050 accept 0 ALIGNMENT 0 YS2-11f23.q1k chr16 648 338 795032 795388 C 311 0.00 1050 reject_low 1 ALIGNMENT 0 YS2-11f24.p1k scplasm1 214 231 4940 4939 F 18 0.00 231 accept 0 ALIGNMENT 176 YS2-11f24.p1k scplasm1 30 213 4757 4940 F 184 99.46 231 accept 0 ALIGNMENT 956 YS2-11g01.q1k chr15 1108 37 70703 71780 C 1072 97.76 1110 accept 0 ALIGNMENT 984 YS2-11g01.p1k chr15 37 1175 67313 68454 F 1139 96.40 1182 accept 0 ALIGNMENT 952 YS2-11g02.q1k chr14 1138 38 528226 529334 C 1101 96.64 1140 accept 0 ALIGNMENT 899 YS2-11g02.p1k chr14 30 1100 526556 527644 F 1071 96.08 1208 accept 0 ALIGNMENT 118 YS2-11g03.p1k chr10 517 1055 13365 13906 F 539 74.95 1211 reject_low 1 ALIGNMENT 0 YS2-11g03.p1k chr10 62 516 13365 13364 F 455 0.00 1211 reject_low 1 ALIGNMENT 946 YS2-11g03.p1k chr02 1155 30 188982 190112 C 1126 95.38 1211 accept 0 ALIGNMENT 941 YS2-11g03.q1k chr02 38 1120 185993 187091 F 1083 96.95 1120 accept 0 ALIGNMENT 0 YS2-11g04.p1k chr16 299 317 867713 867712 F 19 0.00 317 accept_chi 0 ALIGNMENT 0 YS2-11g04.q1k vc_1 294 62 2513 2512 C 233 0.00 335 reject_low 2 ALIGNMENT 0 YS2-11g04.q1k vc_3 294 62 2513 2512 C 233 0.00 335 reject_low 4 ALIGNMENT 0 YS2-11g04.q1k vc_2 294 62 2146 2145 C 233 0.00 335 reject_low 3 ALIGNMENT 39 YS2-11g04.q1k vc_5 335 297 5025 5063 C 39 100.00 335 reject_low 6 ALIGNMENT 250 YS2-11g04.p1k chr16 32 298 867448 867713 F 267 99.63 317 accept_chi 0 ALIGNMENT 0 YS2-11g04.q1k vc_4 62 294 5831 5830 F 233 0.00 335 reject_low 5 ALIGNMENT 38 YS2-11g04.q1k vc_7 298 335 13525 13562 F 38 100.00 335 reject_low 7 ALIGNMENT 0 YS2-11g04.q1k vc_5 296 62 37 36 C 235 0.00 335 reject_low 8 ALIGNMENT 0 YS2-11g04.q1k chr16 335 295 867449 867448 C 41 0.00 335 accept_chi 1 ALIGNMENT 41 YS2-11g04.q1k vc_1 335 295 2472 2512 C 41 100.00 335 reject_low 2 ALIGNMENT 41 YS2-11g04.q1k vc_3 335 295 2472 2512 C 41 100.00 335 reject_low 4 ALIGNMENT 41 YS2-11g04.q1k vc_4 295 335 5831 5871 F 41 100.00 335 reject_low 5 ALIGNMENT 0 YS2-11g04.q1k vc_7 62 297 13525 13524 F 236 0.00 335 reject_low 7 ALIGNMENT 0 YS2-11g04.q1k vc_5 296 62 5064 5063 C 235 0.00 335 reject_low 6 ALIGNMENT 41 YS2-11g04.q1k vc_2 335 295 2105 2145 C 41 100.00 335 reject_low 3 ALIGNMENT 249 YS2-11g04.q1k chr16 294 30 867448 867713 C 265 99.62 335 accept_chi 1 ALIGNMENT 36 YS2-11g04.q1k vc_5 332 297 1 36 C 36 100.00 335 reject_low 8 ALIGNMENT 969 YS2-11g06.q1k chr12 30 1161 829932 831076 F 1132 96.11 1189 accept 0 ALIGNMENT 244 YS2-11g06.p1k chr12 483 25 833676 834132 C 459 83.22 1159 accept 0 ALIGNMENT 994 YS2-11g07.q1k chr15 1156 38 804475 805599 C 1119 97.68 1163 accept 0 ALIGNMENT 950 YS2-11g07.p1k chr15 31 1147 803307 804437 F 1117 96.42 1218 accept 0 ALIGNMENT 0 YS2-11g09.q1k vc_5 159 62 43 42 C 98 0.00 204 reject_low 10 ALIGNMENT 39 YS2-11g09.q1k vc_5 201 160 1 42 C 42 97.62 204 reject_low 10 ALIGNMENT 121 YS2-11g09.q1k chr12 37 163 459672 459798 F 127 98.43 204 manual 0 ALIGNMENT 41 YS2-11g09.q1k vc_4 164 204 5831 5871 F 41 100.00 204 reject_low 9 ALIGNMENT 41 YS2-11g09.q1k vc_3 204 164 2472 2512 C 41 100.00 204 reject_low 8 ALIGNMENT 38 YS2-11g09.q1k vc_7 167 204 13525 13562 F 38 100.00 204 reject_low 11 ALIGNMENT 116 YS2-11g09.q1k chr12 37 158 468809 468930 F 122 98.36 204 manual 2 ALIGNMENT 113 YS2-11g09.q1k chr12 40 158 472464 472582 F 119 98.32 204 manual 3 ALIGNMENT 0 YS2-11g09.q1k chr12 164 204 459798 459797 F 41 0.00 204 manual 0 ALIGNMENT 113 YS2-11g09.q1k chr12 40 158 485696 485814 F 119 98.32 204 manual 5 ALIGNMENT 0 YS2-11g09.q1k chr12 159 204 485814 485813 F 46 0.00 204 manual 5 ALIGNMENT 0 YS2-11g09.q1k chr12 159 204 468930 468929 F 46 0.00 204 manual 2 ALIGNMENT 0 YS2-11g09.q1k chr12 164 204 489471 489470 F 41 0.00 204 manual 1 ALIGNMENT 118 YS2-11g09.q1k chr12 40 163 489348 489471 F 124 98.39 204 manual 1 ALIGNMENT 0 YS2-11g09.q1k vc_7 62 166 13525 13524 F 105 0.00 204 reject_low 11 ALIGNMENT 0 YS2-11g09.q1k chr12 159 204 472582 472581 F 46 0.00 204 manual 3 ALIGNMENT 41 YS2-11g09.q1k vc_1 204 164 2472 2512 C 41 100.00 204 reject_low 7 ALIGNMENT 0 YS2-11g09.q1k vc_4 62 163 5831 5830 F 102 0.00 204 reject_low 9 ALIGNMENT 42 YS2-11g09.q1k vc_5 204 160 5025 5069 C 45 97.78 204 reject_low 6 ALIGNMENT 0 YS2-11g09.q1k chr12 159 204 482162 482161 F 46 0.00 204 manual 4 ALIGNMENT 113 YS2-11g09.q1k chr12 40 158 482044 482162 F 119 98.32 204 manual 4 ALIGNMENT 0 YS2-11g09.q1k vc_5 159 62 5070 5069 C 98 0.00 204 reject_low 6 ALIGNMENT 0 YS2-11g09.q1k vc_1 163 62 2513 2512 C 102 0.00 204 reject_low 7 ALIGNMENT 0 YS2-11g09.q1k vc_3 163 62 2513 2512 C 102 0.00 204 reject_low 8 ALIGNMENT 0 YS2-11g10.p1k chr04 226 209 1354952 1354951 C 18 0.00 226 manual 0 ALIGNMENT 0 YS2-11g10.q1k vc_7 62 209 13525 13524 F 148 0.00 247 reject_vc 8 ALIGNMENT 148 YS2-11g10.q1k chr13 206 28 226384 226563 C 179 95.53 247 manual 3 ALIGNMENT 0 YS2-11g10.q1k vc_5 208 62 37 36 C 147 0.00 247 reject_vc 9 ALIGNMENT 36 YS2-11g10.q1k vc_5 244 209 1 36 C 36 100.00 247 reject_vc 9 ALIGNMENT 38 YS2-11g10.q1k vc_7 210 247 13525 13562 F 38 100.00 247 reject_vc 8 ALIGNMENT 0 YS2-11g10.q1k vc_4 62 205 5830 5829 F 144 0.00 247 reject_vc 6 ALIGNMENT 0 YS2-11g10.p1k chr13 209 226 226565 226564 F 18 0.00 226 manual 2 ALIGNMENT 0 YS2-11g10.q1k chr13 247 207 226385 226384 C 41 0.00 247 manual 3 ALIGNMENT 176 YS2-11g10.p1k chr04 208 27 1354951 1355132 C 182 100.00 226 manual 0 ALIGNMENT 169 YS2-11g10.q1k chr04 28 206 1354953 1355132 F 179 99.44 247 manual 1 ALIGNMENT 0 YS2-11g10.q1k chr04 207 247 1355132 1355131 F 41 0.00 247 manual 1 ALIGNMENT 39 YS2-11g10.q1k vc_5 247 209 5025 5063 C 39 100.00 247 reject_vc 7 ALIGNMENT 0 YS2-11g10.q1k vc_1 205 62 2514 2513 C 144 0.00 247 reject_vc 4 ALIGNMENT 0 YS2-11g10.q1k vc_3 205 62 2514 2513 C 144 0.00 247 reject_vc 5 ALIGNMENT 0 YS2-11g10.q1k vc_5 208 62 5064 5063 C 147 0.00 247 reject_vc 7 ALIGNMENT 155 YS2-11g10.p1k chr13 27 208 226384 226565 F 182 96.15 226 manual 2 ALIGNMENT 42 YS2-11g10.q1k vc_3 247 206 2472 2513 C 42 100.00 247 reject_vc 5 ALIGNMENT 42 YS2-11g10.q1k vc_1 247 206 2472 2513 C 42 100.00 247 reject_vc 4 ALIGNMENT 42 YS2-11g10.q1k vc_4 206 247 5830 5871 F 42 100.00 247 reject_vc 6 ALIGNMENT 0 YS2-11g11.q1k chr13 469 829 435625 435624 F 361 0.00 1095 reject_low 3 ALIGNMENT 152 YS2-11g11.q1k chr02 80 755 534134 534809 F 676 74.56 1095 reject_low 2 ALIGNMENT 0 YS2-11g11.q1k chr02 756 829 534809 534808 F 74 0.00 1095 reject_low 2 ALIGNMENT 88 YS2-11g11.q1k chr13 101 468 435258 435625 F 368 75.27 1095 reject_low 3 ALIGNMENT 989 YS2-11g11.q1k chr13 1090 29 872955 874019 C 1062 97.74 1095 accept 0 ALIGNMENT 0 YS2-11g11.q1k chr02 62 79 534134 534133 F 18 0.00 1095 reject_low 2 ALIGNMENT 991 YS2-11g11.p1k chr13 30 1172 870107 871250 F 1143 96.68 1211 accept 0 ALIGNMENT 0 YS2-11g11.q1k chr13 62 100 435258 435257 F 39 0.00 1095 reject_low 3 ALIGNMENT 0 YS2-11g11.q1k chr15 829 784 159523 159522 C 46 0.00 1095 reject_low 1 ALIGNMENT 437 YS2-11g11.q1k chr15 783 29 159522 160276 C 755 86.09 1095 reject_low 1 ALIGNMENT 0 YS2-11g12.p1k vc_4 62 1018 5875 5874 F 957 0.00 1270 reject_low 4 ALIGNMENT 126 YS2-11g12.p1k vc_5 1250 1019 4785 5021 C 232 87.07 1270 reject_low 5 ALIGNMENT 0 YS2-11g12.p1k vc_5 1018 62 5022 5021 C 957 0.00 1270 reject_low 5 ALIGNMENT 0 YS2-11g12.p1k vc_7 62 1018 104 103 F 957 0.00 1270 reject_low 6 ALIGNMENT 126 YS2-11g12.p1k vc_7 1019 1250 104 340 F 232 87.07 1270 reject_low 6 ALIGNMENT 0 YS2-11g12.p1k vc_7 62 1018 13566 13565 F 957 0.00 1270 reject_low 7 ALIGNMENT 0 YS2-11g12.p1k vc_3 1018 62 2102 2101 C 957 0.00 1270 reject_low 3 ALIGNMENT 126 YS2-11g12.p1k vc_7 1019 1250 13566 13802 F 232 87.07 1270 reject_low 7 ALIGNMENT 0 YS2-11g12.p1k vc_1 1018 62 2102 2101 C 957 0.00 1270 reject_low 1 ALIGNMENT 126 YS2-11g12.p1k vc_1 1250 1019 1865 2101 C 232 87.07 1270 reject_low 1 ALIGNMENT 893 YS2-11g12.q1k chr04 999 25 1513339 1514311 C 975 98.77 1135 accept 0 ALIGNMENT 126 YS2-11g12.p1k vc_2 1250 1019 1865 2101 C 232 87.07 1270 reject_low 2 ALIGNMENT 888 YS2-11g12.p1k chr04 24 997 1513338 1514311 F 974 98.46 1270 accept 0 ALIGNMENT 126 YS2-11g12.p1k vc_3 1250 1019 1865 2101 C 232 87.07 1270 reject_low 3 ALIGNMENT 126 YS2-11g12.p1k vc_4 1019 1250 5875 6111 F 232 87.07 1270 reject_low 4 ALIGNMENT 0 YS2-11g12.p1k vc_2 1018 62 2102 2101 C 957 0.00 1270 reject_low 2 ALIGNMENT 38 YS2-11g13.q1k vc_7 185 222 13525 13562 F 38 100.00 222 reject_low 8 ALIGNMENT 0 YS2-11g13.q1k vc_5 183 62 37 36 C 122 0.00 222 reject_low 9 ALIGNMENT 0 YS2-11g13.q1k chr12 182 222 452484 452483 F 41 0.00 222 manual 0 ALIGNMENT 0 YS2-11g13.q1k vc_5 183 62 5064 5063 C 122 0.00 222 reject_low 7 ALIGNMENT 0 YS2-11g13.q1k chr12 182 222 461621 461620 F 41 0.00 222 manual 1 ALIGNMENT 0 YS2-11g13.q1k vc_7 62 184 13525 13524 F 123 0.00 222 reject_low 8 ALIGNMENT 0 YS2-11g13.q1k vc_4 62 179 5829 5828 F 118 0.00 222 reject_low 6 ALIGNMENT 137 YS2-11g13.q1k chr12 35 181 452337 452484 F 147 97.96 222 manual 0 ALIGNMENT 0 YS2-11g13.q1k vc_3 179 62 2515 2514 C 118 0.00 222 reject_low 5 ALIGNMENT 36 YS2-11g13.q1k vc_5 219 184 1 36 C 36 100.00 222 reject_low 9 ALIGNMENT 42 YS2-11g13.q1k vc_3 222 180 2472 2514 C 43 100.00 222 reject_low 5 ALIGNMENT 0 YS2-11g13.q1k vc_1 179 62 2515 2514 C 118 0.00 222 reject_low 3 ALIGNMENT 42 YS2-11g13.q1k vc_1 222 180 2472 2514 C 43 100.00 222 reject_low 3 ALIGNMENT 137 YS2-11g13.q1k chr12 35 181 461474 461621 F 147 97.96 222 manual 1 ALIGNMENT 0 YS2-11g13.q1k vc_2 179 62 2148 2147 C 118 0.00 222 reject_low 4 ALIGNMENT 0 YS2-11g13.q1k chr12 182 222 490452 490451 F 41 0.00 222 manual 2 ALIGNMENT 42 YS2-11g13.q1k vc_2 222 180 2105 2147 C 43 100.00 222 reject_low 4 ALIGNMENT 39 YS2-11g13.q1k vc_5 222 184 5025 5063 C 39 100.00 222 reject_low 7 ALIGNMENT 42 YS2-11g13.q1k vc_4 180 222 5829 5871 F 43 100.00 222 reject_low 6 ALIGNMENT 134 YS2-11g13.q1k chr12 35 181 490305 490452 F 147 97.28 222 manual 2 ALIGNMENT 798 YS2-11g14.q1k chr02 892 39 4212 5064 C 854 98.48 1183 reject_low 17 ALIGNMENT 999 YS2-11g14.q1k chr14 1183 39 4663 5813 C 1145 96.07 1183 ambiguous_tel 6 ALIGNMENT 1014 YS2-11g14.q1k chr10 1183 39 5035 6185 C 1145 96.51 1183 ambiguous_tel 1 ALIGNMENT 874 YS2-11g14.q1k chr12 39 1183 1065898 1067016 F 1145 93.54 1183 reject_low 9 ALIGNMENT 935 YS2-11g14.q1k chr05 39 1183 571095 572228 F 1145 94.85 1183 ambiguous_tel 8 ALIGNMENT 815 YS2-11g14.q1k chr16 39 892 943313 944166 F 854 99.06 1183 reject_low 11 ALIGNMENT 1014 YS2-11g14.q1k chr09 1183 39 5052 6202 C 1145 96.51 1183 ambiguous_tel 0 ALIGNMENT 807 YS2-11g14.q1k chr12 892 39 9546 10398 C 854 98.83 1183 reject_low 15 ALIGNMENT 811 YS2-11g14.q1k chr06 890 39 3050 3901 C 852 98.94 1183 reject_low 13 ALIGNMENT 810 YS2-11g14.q1k chr05 1183 39 4667 5768 C 1145 92.23 1183 reject_low 10 ALIGNMENT 999 YS2-11g14.q1k chr16 1183 39 4572 5722 C 1145 96.07 1183 ambiguous_tel 7 ALIGNMENT 1002 YS2-11g14.q1k chr15 39 1183 1085414 1086564 F 1145 96.16 1183 ambiguous_tel 4 ALIGNMENT 807 YS2-11g14.q1k chr12 892 39 4011 4863 C 854 98.83 1183 reject_low 14 ALIGNMENT 1002 YS2-11g14.q1k chr12 39 1183 1072450 1073600 F 1145 96.16 1183 ambiguous_tel 3 ALIGNMENT 807 YS2-11g14.q1k chr13 892 39 3887 4739 C 854 98.83 1183 reject_low 16 ALIGNMENT 813 YS2-11g14.q1k chr08 892 39 3743 4595 C 854 99.06 1183 reject_low 12 ALIGNMENT 1002 YS2-11g14.q1k chr04 39 1183 1526249 1527399 F 1145 96.16 1183 ambiguous_tel 2 ALIGNMENT 999 YS2-11g14.q1k chr07 39 1183 1085155 1086305 F 1145 96.07 1183 ambiguous_tel 5 ALIGNMENT 793 YS2-11g14.q1k chr08 39 892 557768 558619 F 854 98.36 1183 reject_low 18 ALIGNMENT 1016 YS2-11g15.p1k chr07 62 1209 264359 265502 F 1148 97.39 1259 accept 0 ALIGNMENT 947 YS2-11g15.q1k chr07 1101 38 268084 269151 C 1064 97.09 1101 accept 0 ALIGNMENT 1023 YS2-11g16.q1k chr08 1120 32 496195 497286 C 1089 98.90 1129 accept 0 ALIGNMENT 1027 YS2-11g16.p1k chr08 24 1231 494845 496064 F 1208 96.11 1264 accept 0 ALIGNMENT 941 YS2-11g17.q1k chr11 1110 37 328464 329543 C 1074 97.39 1114 accept 0 ALIGNMENT 923 YS2-11g17.p1k chr11 34 1225 324837 326028 F 1192 94.63 1234 accept 0 ALIGNMENT 943 YS2-11g18.p1k chr15 1139 25 706781 707902 C 1115 95.87 1278 reject_low 1 ALIGNMENT 0 YS2-11g18.q1k chr15 951 62 703754 703753 C 890 0.00 1143 reject_low 49 ALIGNMENT 964 YS2-11g18.p1k chr14 1139 25 564750 565871 C 1115 96.50 1278 reject_low 4 ALIGNMENT 254 YS2-11g18.q1k chr08 651 942 91386 91677 F 292 96.92 1143 reject_low 15 ALIGNMENT 318 YS2-11g18.p1k chr16 922 43 807524 808404 C 880 79.55 1278 reject_low 32 ALIGNMENT 0 YS2-11g18.q1k chr14 651 62 632492 632491 C 590 0.00 1143 reject_low 17 ALIGNMENT 861 YS2-11g18.q1k chr07 38 942 110245 111149 F 905 99.34 1143 accept 0 ALIGNMENT 0 YS2-11g18.q1k chr10 943 951 203610 203713 F 9 0.00 1143 reject_low 51 ALIGNMENT 0 YS2-11g18.q1k chr08 62 650 91386 91385 F 589 0.00 1143 reject_low 15 ALIGNMENT 0 YS2-11g18.q1k chr15 62 651 703773 703772 F 590 0.00 1143 reject_low 1 ALIGNMENT 940 YS2-11g18.p1k chr04 25 1139 873937 875058 F 1115 95.87 1278 reject_low 12 ALIGNMENT 0 YS2-11g18.q1k chr06 949 652 138232 143809 C 298 0.00 1143 reject_low 42 ALIGNMENT 0 YS2-11g18.q1k chr05 647 62 354731 354730 C 586 0.00 1143 reject_low 14 ALIGNMENT 0 YS2-11g18.q1k chr09 62 951 197146 197145 F 890 0.00 1143 reject_low 45 ALIGNMENT 32 YS2-11g18.q1k chr11 989 1058 313297 313368 F 70 82.86 1143 reject_low 27 ALIGNMENT 0 YS2-11g18.q1k chr13 62 651 503770 503769 F 590 0.00 1143 reject_low 21 ALIGNMENT 972 YS2-11g18.p1k chr02 25 1151 31762 32896 F 1127 96.54 1278 reject_low 2 ALIGNMENT 74 YS2-11g18.q1k chr07 997 1136 111235 111376 F 140 87.86 1143 accept 0 ALIGNMENT 252 YS2-11g18.q1k chr13 942 650 808615 808907 C 293 96.59 1143 reject_low 19 ALIGNMENT 0 YS2-11g18.q1k chr07 651 62 931544 931543 C 590 0.00 1143 reject_low 25 ALIGNMENT 937 YS2-11g18.p1k chr15 25 1139 972403 973524 F 1115 95.78 1278 reject_low 13 ALIGNMENT 37 YS2-11g18.q1k chr14 952 1046 96620 96719 F 95 81.05 1143 reject_low 52 ALIGNMENT 86 YS2-11g18.q1k chr09 1141 952 246346 246539 C 190 84.21 1143 reject_low 39 ALIGNMENT 318 YS2-11g18.p1k chr10 43 922 480119 480999 F 880 79.55 1278 reject_low 29 ALIGNMENT 0 YS2-11g18.q1k chr10 62 650 203318 203317 F 589 0.00 1143 reject_low 51 ALIGNMENT 0 YS2-11g18.q1k chr09 651 62 197021 197020 C 590 0.00 1143 reject_low 20 ALIGNMENT 250 YS2-11g18.q1k chr13 652 942 503770 504060 F 291 96.56 1143 reject_low 21 ALIGNMENT 0 YS2-11g18.q1k chr15 62 604 704074 704073 F 543 0.00 1143 reject_low 44 ALIGNMENT 244 YS2-11g18.q1k chr08 652 942 85535 85825 F 291 95.88 1143 reject_low 24 ALIGNMENT 251 YS2-11g18.q1k chr10 651 942 197463 197754 F 292 96.58 1143 reject_low 50 ALIGNMENT 321 YS2-11g18.p1k chr10 43 922 474535 475415 F 880 79.66 1278 reject_low 26 ALIGNMENT 31 YS2-11g18.q1k chr09 651 605 246493 246539 C 47 91.49 1143 reject_low 43 ALIGNMENT 313 YS2-11g18.p1k chr16 43 922 846566 847449 F 880 79.55 1278 reject_low 36 ALIGNMENT 20 YS2-11g18.q1k chr10 952 1016 203714 203780 F 65 78.46 1143 reject_low 50,51 ALIGNMENT 0 YS2-11g18.q1k chr09 951 62 246540 246539 C 890 0.00 1143 reject_low 39 ALIGNMENT 0 YS2-11g18.q1k chr10 652 889 203760 203759 F 238 0.00 1143 reject_low 40 ALIGNMENT 991 YS2-11g18.p1k chr07 25 1139 813573 814694 F 1115 97.40 1278 reject_low 8 ALIGNMENT 0 YS2-11g18.q1k chr14 62 651 561608 561607 F 590 0.00 1143 reject_low 4 ALIGNMENT 984 YS2-11g18.p1k chr12 25 1151 943310 944444 F 1127 96.89 1278 reject_low 6 ALIGNMENT 0 YS2-11g18.q1k chr08 62 651 85535 85534 F 590 0.00 1143 reject_low 24 ALIGNMENT 250 YS2-11g18.q1k chr09 942 652 196730 197020 C 291 96.56 1143 reject_low 20 ALIGNMENT 0 YS2-11g18.q1k chr09 889 652 246494 246493 C 238 0.00 1143 reject_low 43 ALIGNMENT 326 YS2-11g18.q1k chr15 652 1136 703773 704263 F 485 90.72 1143 reject_low 1 ALIGNMENT 969 YS2-11g18.p1k chr07 1139 25 571461 572583 C 1115 96.68 1278 reject_low 9 ALIGNMENT 0 YS2-11g18.p1k chr13 62 84 198531 198530 F 23 0.00 1278 reject_low 35 ALIGNMENT 0 YS2-11g18.q1k chr10 62 650 197463 197462 F 589 0.00 1143 reject_low 50 ALIGNMENT 0 YS2-11g18.q1k chr15 652 889 704120 704119 F 238 0.00 1143 reject_low 44 ALIGNMENT 0 YS2-11g18.q1k chr14 638 889 562076 562075 F 252 0.00 1143 reject_low 47 ALIGNMENT 0 YS2-11g18.q1k chr04 62 650 437145 437144 F 589 0.00 1143 reject_low 23 ALIGNMENT 31 YS2-11g18.q1k chr15 605 651 704074 704120 F 47 91.49 1143 reject_low 44 ALIGNMENT 0 YS2-11g18.q1k chr07 943 996 111150 111234 F 54 0.00 1143 accept 0 ALIGNMENT 0 YS2-11g18.q1k chr06 603 62 138231 138230 C 542 0.00 1143 reject_low 41 ALIGNMENT 0 YS2-11g18.q1k chr06 949 62 143859 143858 C 888 0.00 1143 reject_low 3 ALIGNMENT 0 YS2-11g18.q1k chr13 649 62 808908 808907 C 588 0.00 1143 reject_low 19 ALIGNMENT 253 YS2-11g18.q1k chr16 942 652 442819 443109 C 291 96.91 1143 reject_low 18 ALIGNMENT 991 YS2-11g18.p1k chr06 25 1139 140029 141150 F 1115 97.40 1278 reject_low 3 ALIGNMENT 0 YS2-11g18.q1k chr14 62 603 562043 562042 F 542 0.00 1143 reject_low 47 ALIGNMENT 250 YS2-11g18.q1k chr02 942 652 35928 36218 C 291 96.56 1143 reject_low 2 ALIGNMENT 318 YS2-11g18.p1k chr13 43 922 186322 187202 F 880 79.55 1278 reject_low 30 ALIGNMENT 961 YS2-11g18.p1k chr04 25 1139 983286 984407 F 1115 96.50 1278 reject_low 10 ALIGNMENT 0 YS2-11g18.q1k chr16 651 62 443110 443109 C 590 0.00 1143 reject_low 18 ALIGNMENT 250 YS2-11g18.q1k chr14 652 942 561608 561898 F 291 96.56 1143 reject_low 4 ALIGNMENT 309 YS2-11g18.p1k chr16 922 43 853512 854392 C 880 79.20 1278 reject_low 38 ALIGNMENT 38 YS2-11g18.q1k chr06 651 604 138183 138230 C 48 95.83 1143 reject_low 41 ALIGNMENT 0 YS2-11g18.q1k chr09 604 62 246540 246539 C 543 0.00 1143 reject_low 43 ALIGNMENT 315 YS2-11g18.p1k chr12 922 43 217968 218848 C 880 79.43 1278 reject_low 33 ALIGNMENT 315 YS2-11g18.p1k chr12 922 43 478861 479741 C 880 79.43 1278 reject_low 34 ALIGNMENT 0 YS2-11g18.q1k chr08 62 604 91773 91772 F 543 0.00 1143 reject_low 46 ALIGNMENT 0 YS2-11g18.q1k chr14 811 951 96610 96619 F 141 0.00 1143 reject_low 52 ALIGNMENT 318 YS2-11g18.p1k chr02 43 922 223194 224074 F 880 79.55 1278 reject_low 28 ALIGNMENT 961 YS2-11g18.p1k chr12 1139 25 978454 979575 C 1115 96.41 1278 reject_low 11 ALIGNMENT 0 YS2-11g18.q1k chr14 62 650 96450 96449 F 589 0.00 1143 reject_low 52 ALIGNMENT 0 YS2-11g18.q1k chr10 62 594 203704 203703 F 533 0.00 1143 reject_low 40 ALIGNMENT 146 YS2-11g18.q1k chr14 651 810 96450 96609 F 160 98.12 1143 reject_low 52 ALIGNMENT 70 YS2-11g18.q1k chr11 414 494 313038 313118 F 81 96.30 1143 reject_low 27 ALIGNMENT 249 YS2-11g18.q1k chr02 942 650 643563 643855 C 293 96.25 1143 reject_low 22 ALIGNMENT 253 YS2-11g18.q1k chr14 942 652 632201 632491 C 291 96.91 1143 reject_low 17 ALIGNMENT 245 YS2-11g18.q1k chr04 651 942 437145 437436 F 292 95.89 1143 reject_low 23 ALIGNMENT 0 YS2-11g18.q1k chr06 603 62 143858 143857 C 542 0.00 1143 reject_low 42 ALIGNMENT 0 YS2-11g18.q1k chr06 889 652 138184 138183 C 238 0.00 1143 reject_low 41 ALIGNMENT 253 YS2-11g18.q1k chr05 942 648 354436 354730 C 295 96.61 1143 reject_low 14 ALIGNMENT 991 YS2-11g18.p1k chr04 1139 25 516401 517522 C 1115 97.31 1278 reject_low 7 ALIGNMENT 312 YS2-11g18.p1k chr02 43 922 261728 262608 F 880 79.32 1278 reject_low 37 ALIGNMENT 254 YS2-11g18.q1k chr16 942 651 436967 437258 C 292 96.92 1143 reject_low 16 ALIGNMENT 0 YS2-11g18.q1k chr08 652 889 91819 91818 F 238 0.00 1143 reject_low 46 ALIGNMENT 27 YS2-11g18.q1k chr14 604 637 562043 562076 F 34 97.06 1143 reject_low 47 ALIGNMENT 34 YS2-11g18.q1k chr09 952 1089 197146 197291 F 138 76.09 1143 reject_low 45 ALIGNMENT 21 YS2-11g18.q1k chr15 1031 952 703670 703753 C 80 76.25 1143 reject_low 49 ALIGNMENT 34 YS2-11g18.q1k chr14 989 1046 632050 632109 F 58 86.21 1143 reject_low 48 ALIGNMENT 251 YS2-11g18.q1k chr10 651 942 203318 203609 F 292 96.58 1143 reject_low 51 ALIGNMENT 0 YS2-11g18.q1k chr02 651 62 36219 36218 C 590 0.00 1143 reject_low 2 ALIGNMENT 103 YS2-11g18.q1k chr06 1141 950 143664 143858 C 192 86.98 1143 reject_low 3 ALIGNMENT 34 YS2-11g18.q1k chr10 595 651 203704 203760 F 57 89.47 1143 reject_low 40 ALIGNMENT 0 YS2-11g18.q1k chr02 649 62 643856 643855 C 588 0.00 1143 reject_low 22 ALIGNMENT 238 YS2-11g18.q1k chr07 942 652 931253 931543 C 291 95.19 1143 reject_low 25 ALIGNMENT 318 YS2-11g18.p1k chr15 43 922 596973 597853 F 880 79.55 1278 reject_low 31 ALIGNMENT 0 YS2-11g18.q1k chr16 650 62 437259 437258 C 589 0.00 1143 reject_low 16 ALIGNMENT 103 YS2-11g18.q1k chr06 1141 950 138037 138231 C 192 86.98 1143 reject_low 42 ALIGNMENT 315 YS2-11g18.p1k chr13 85 922 198531 199369 F 838 80.07 1278 reject_low 35 ALIGNMENT 28 YS2-11g18.q1k chr08 605 651 91773 91819 F 47 89.36 1143 reject_low 46 ALIGNMENT 0 YS2-11g18.q1k chr11 495 988 313119 313296 F 494 0.00 1143 reject_low 27 ALIGNMENT 38 YS2-11g18.q1k chr06 651 604 143810 143857 C 48 95.83 1143 reject_low 42 ALIGNMENT 0 YS2-11g18.q1k chr11 62 413 313038 313037 F 352 0.00 1143 reject_low 27 ALIGNMENT 0 YS2-11g18.q1k chr10 943 951 197755 203713 F 9 0.00 1143 reject_low 50 ALIGNMENT 987 YS2-11g18.p1k chr03 25 1151 86931 88065 F 1127 96.98 1278 reject_low 5 ALIGNMENT 0 YS2-11g18.q1k chr14 62 988 632050 632049 F 927 0.00 1143 reject_low 48 ALIGNMENT 0 YS2-11g19.q1k chr12 83 75 458615 458612 C 9 0.00 1141 reject_bad_break 0 ALIGNMENT 57 YS2-11g19.p1k chr07 180 64 7339 7459 C 117 84.62 1226 reject_low 2 ALIGNMENT 0 YS2-11g19.p1k chr09 181 894 433237 433236 F 714 0.00 1226 reject_low 3 ALIGNMENT 917 YS2-11g19.q1k chr12 1140 84 466690 467751 C 1057 95.74 1141 reject_bad_break 1 ALIGNMENT 0 YS2-11g19.p1k chr07 894 181 7340 7339 C 714 0.00 1226 reject_low 2 ALIGNMENT 55 YS2-11g19.p1k chr09 63 180 433116 433237 F 118 83.90 1226 reject_low 3 ALIGNMENT 0 YS2-11g19.q1k chr12 83 75 467752 467749 C 9 0.00 1141 reject_bad_break 1 ALIGNMENT 917 YS2-11g19.q1k chr12 1140 84 457553 458614 C 1057 95.74 1141 reject_bad_break 0 ALIGNMENT 0 YS2-11g19.p1k chr12 121 179 464579 464578 F 59 0.00 1226 reject_bad_break 1 ALIGNMENT 901 YS2-11g19.p1k chr12 180 1224 455442 456478 F 1045 96.27 1226 reject_bad_break 0 ALIGNMENT 901 YS2-11g19.p1k chr12 180 1224 464579 465615 F 1045 96.27 1226 reject_bad_break 1 ALIGNMENT 31 YS2-11g19.q1k chr12 74 35 467750 467787 C 40 95.00 1141 reject_bad_break 1 ALIGNMENT 31 YS2-11g19.q1k chr12 74 35 458613 458650 C 40 95.00 1141 reject_bad_break 0 ALIGNMENT 0 YS2-11g19.p1k chr12 121 179 455442 455441 F 59 0.00 1226 reject_bad_break 0 ALIGNMENT 312 YS2-11g20.p1k chr05 591 146 23442 23885 C 446 89.01 1207 accept 0 ALIGNMENT 0 YS2-11g22.p1k chr12 62 488 485696 485695 F 427 0.00 1188 reject_low 8 ALIGNMENT 0 YS2-11g22.p1k chr12 62 488 482044 482043 F 427 0.00 1188 reject_low 7 ALIGNMENT 94 YS2-11g22.p1k chr06 229 122 31622 31729 C 108 98.15 1188 reject_low 4 ALIGNMENT 0 YS2-11g22.p1k chr12 62 488 489348 489347 F 427 0.00 1188 reject_low 5 ALIGNMENT 119 YS2-11g22.p1k chr12 489 607 472464 472582 F 119 100.00 1188 reject_low 6 ALIGNMENT 0 YS2-11g22.p1k chr12 62 488 472464 472463 F 427 0.00 1188 reject_low 6 ALIGNMENT 0 YS2-11g22.p1k chr12 608 860 485814 485813 F 253 0.00 1188 reject_low 8 ALIGNMENT 846 YS2-11g22.p1k chr12 36 1177 459222 460396 F 1142 93.26 1188 accept 0 ALIGNMENT 119 YS2-11g22.p1k chr12 489 607 485696 485814 F 119 100.00 1188 reject_low 8 ALIGNMENT 992 YS2-11g22.q1k chr12 1112 25 463870 464960 C 1088 97.79 1114 accept 0 ALIGNMENT 0 YS2-11g22.p1k chr12 822 860 460016 460015 F 39 0.00 1188 reject_low 3 ALIGNMENT 992 YS2-11g22.q1k chr12 1112 25 454733 455823 C 1088 97.79 1114 reject_low 1 ALIGNMENT 0 YS2-11g22.p1k chr12 608 860 472582 472581 F 253 0.00 1188 reject_low 6 ALIGNMENT 0 YS2-11g22.p1k chr12 62 419 459606 459605 F 358 0.00 1188 reject_low 3 ALIGNMENT 128 YS2-11g22.p1k chr12 489 622 489348 489481 F 134 98.51 1188 reject_low 5 ALIGNMENT 545 YS2-11g22.p1k chr12 36 607 468359 468930 F 572 99.48 1188 reject_low 2 ALIGNMENT 0 YS2-11g22.p1k chr12 608 860 482162 482161 F 253 0.00 1188 reject_low 7 ALIGNMENT 0 YS2-11g22.p1k chr06 860 230 31623 31622 C 631 0.00 1188 reject_low 4 ALIGNMENT 0 YS2-11g22.p1k chr06 121 62 31730 31729 C 60 0.00 1188 reject_low 4 ALIGNMENT 119 YS2-11g22.p1k chr12 489 607 482044 482162 F 119 100.00 1188 reject_low 7 ALIGNMENT 359 YS2-11g22.p1k chr12 420 821 459606 460016 F 402 97.26 1188 reject_low 3 ALIGNMENT 0 YS2-11g22.p1k chr12 608 860 468930 468929 F 253 0.00 1188 reject_low 2 ALIGNMENT 0 YS2-11g22.p1k chr12 623 860 489481 489480 F 238 0.00 1188 reject_low 5 ALIGNMENT 0 YS2-11g23.p1k chr13 291 273 459791 459790 C 19 0.00 291 accept_chi 1 ALIGNMENT 0 YS2-11g23.q1k vc_7 95 239 13525 13524 F 145 0.00 277 reject_low 7 ALIGNMENT 0 YS2-11g23.q1k vc_4 95 236 5831 5830 F 142 0.00 277 reject_low 5 ALIGNMENT 36 YS2-11g23.q1k vc_5 274 239 1 36 C 36 100.00 277 reject_low 8 ALIGNMENT 0 YS2-11g23.q1k vc_1 236 95 2513 2512 C 142 0.00 277 reject_low 2 ALIGNMENT 180 YS2-11g23.q1k chr13 37 236 459790 459989 F 200 97.50 277 accept_chi 0 ALIGNMENT 38 YS2-11g23.q1k vc_7 240 277 13525 13562 F 38 100.00 277 reject_low 7 ALIGNMENT 41 YS2-11g23.q1k vc_1 277 237 2472 2512 C 41 100.00 277 reject_low 2 ALIGNMENT 41 YS2-11g23.q1k vc_4 237 277 5831 5871 F 41 100.00 277 reject_low 5 ALIGNMENT 41 YS2-11g23.q1k vc_2 277 237 2105 2145 C 41 100.00 277 reject_low 3 ALIGNMENT 0 YS2-11g23.q1k vc_2 236 95 2146 2145 C 142 0.00 277 reject_low 3 ALIGNMENT 39 YS2-11g23.q1k vc_5 277 239 5025 5063 C 39 100.00 277 reject_low 6 ALIGNMENT 0 YS2-11g23.q1k vc_5 238 95 37 36 C 144 0.00 277 reject_low 8 ALIGNMENT 41 YS2-11g23.q1k vc_3 277 237 2472 2512 C 41 100.00 277 reject_low 4 ALIGNMENT 171 YS2-11g23.p1k chr13 272 72 459790 459989 C 201 96.02 291 accept_chi 1 ALIGNMENT 0 YS2-11g23.q1k chr13 237 277 459989 459988 F 41 0.00 277 accept_chi 0 ALIGNMENT 0 YS2-11g23.q1k vc_3 236 95 2513 2512 C 142 0.00 277 reject_low 4 ALIGNMENT 0 YS2-11g23.q1k vc_5 238 95 5064 5063 C 144 0.00 277 reject_low 6 ALIGNMENT 850 YS2-11g24.q1k chr05 1032 38 562177 563168 C 995 96.38 1090 accept 0 ALIGNMENT 997 YS2-11g24.p1k chr05 36 1145 558879 559984 F 1110 97.39 1191 accept 0 ALIGNMENT 984 YS2-11h01.q1k chr05 25 1122 558398 559508 F 1098 97.63 1125 accept 0 ALIGNMENT 975 YS2-11h01.p1k chr05 1190 32 559120 560291 C 1159 95.51 1229 accept 0 ALIGNMENT 42 YS2-11h03.q1k vc_4 176 217 5830 5871 F 42 100.00 217 reject_low 4 ALIGNMENT 0 YS2-11h03.q1k vc_7 62 179 13525 13524 F 118 0.00 217 reject_low 6 ALIGNMENT 0 YS2-11h03.q1k vc_3 175 62 2514 2513 C 114 0.00 217 reject_low 3 ALIGNMENT 0 YS2-11h03.q1k vc_2 175 62 2147 2146 C 114 0.00 217 reject_low 2 ALIGNMENT 0 YS2-11h03.q1k vc_4 62 175 5830 5829 F 114 0.00 217 reject_low 4 ALIGNMENT 138 YS2-11h03.q1k chr09 177 39 124110 124248 C 139 100.00 217 accept 0 ALIGNMENT 0 YS2-11h03.q1k chr09 217 178 124111 124110 C 40 0.00 217 accept 0 ALIGNMENT 36 YS2-11h03.q1k vc_5 214 179 1 36 C 36 100.00 217 reject_low 7 ALIGNMENT 0 YS2-11h03.q1k vc_5 178 62 37 36 C 117 0.00 217 reject_low 7 ALIGNMENT 42 YS2-11h03.q1k vc_3 217 176 2472 2513 C 42 100.00 217 reject_low 3 ALIGNMENT 0 YS2-11h03.q1k vc_5 178 62 5064 5063 C 117 0.00 217 reject_low 5 ALIGNMENT 0 YS2-11h03.q1k vc_1 175 62 2514 2513 C 114 0.00 217 reject_low 1 ALIGNMENT 38 YS2-11h03.q1k vc_7 180 217 13525 13562 F 38 100.00 217 reject_low 6 ALIGNMENT 39 YS2-11h03.q1k vc_5 217 179 5025 5063 C 39 100.00 217 reject_low 5 ALIGNMENT 42 YS2-11h03.q1k vc_2 217 176 2105 2146 C 42 100.00 217 reject_low 2 ALIGNMENT 42 YS2-11h03.q1k vc_1 217 176 2472 2513 C 42 100.00 217 reject_low 1 ALIGNMENT 945 YS2-11h04.p1k chr08 33 1187 88548 89702 F 1155 95.67 1266 ambiguous_trans 2 ALIGNMENT 928 YS2-11h04.q1k chr16 1158 40 769990 771121 C 1119 95.62 1158 accept 0 ALIGNMENT 970 YS2-11h04.p1k chr10 33 1219 200480 201672 F 1187 95.87 1266 ambiguous_trans 1 ALIGNMENT 942 YS2-11h04.p1k chr16 1187 33 438942 440097 C 1155 95.67 1266 ambiguous_trans 3 ALIGNMENT 0 YS2-11h05.q1k chr16 244 205 569903 569902 C 40 0.00 244 accept 0 ALIGNMENT 0 YS2-11h05.q1k vc_5 205 62 5064 5063 C 144 0.00 244 reject_low 5 ALIGNMENT 0 YS2-11h05.q1k vc_2 203 62 2146 2145 C 142 0.00 244 reject_low 2 ALIGNMENT 41 YS2-11h05.q1k vc_2 244 204 2105 2145 C 41 100.00 244 reject_low 2 ALIGNMENT 0 YS2-11h05.q1k vc_1 203 62 2513 2512 C 142 0.00 244 reject_low 1 ALIGNMENT 39 YS2-11h05.q1k vc_5 244 206 5025 5063 C 39 100.00 244 reject_low 5 ALIGNMENT 0 YS2-11h05.q1k vc_5 205 62 37 36 C 144 0.00 244 reject_low 7 ALIGNMENT 0 YS2-11h05.q1k vc_7 62 206 13525 13524 F 145 0.00 244 reject_low 6 ALIGNMENT 41 YS2-11h05.q1k vc_3 244 204 2472 2512 C 41 100.00 244 reject_low 3 ALIGNMENT 41 YS2-11h05.q1k vc_1 244 204 2472 2512 C 41 100.00 244 reject_low 1 ALIGNMENT 159 YS2-11h05.q1k chr16 204 37 569902 570069 C 168 100.00 244 accept 0 ALIGNMENT 0 YS2-11h05.q1k vc_4 62 203 5831 5830 F 142 0.00 244 reject_low 4 ALIGNMENT 36 YS2-11h05.q1k vc_5 241 206 1 36 C 36 100.00 244 reject_low 7 ALIGNMENT 41 YS2-11h05.q1k vc_4 204 244 5831 5871 F 41 100.00 244 reject_low 4 ALIGNMENT 38 YS2-11h05.q1k vc_7 207 244 13525 13562 F 38 100.00 244 reject_low 6 ALIGNMENT 0 YS2-11h05.q1k vc_3 203 62 2513 2512 C 142 0.00 244 reject_low 3 ALIGNMENT 230 YS2-11h06.p1k chr07 38 358 494121 494439 F 321 91.59 1288 accept_chi 0 ALIGNMENT 192 YS2-11h06.q1k chr07 353 50 494114 494417 C 304 89.14 1280 accept_chi 1 ALIGNMENT 79 YS2-11h07.p1k vc_7 895 1116 13572 13796 F 222 79.28 1256 reject_low 2 ALIGNMENT 606 YS2-11h07.p1k chr12 856 26 56197 57028 C 831 92.06 1256 accept 0 ALIGNMENT 567 YS2-11h07.q1k chr12 37 847 56186 56994 F 811 91.12 1177 accept 0 ALIGNMENT 79 YS2-11h07.p1k vc_4 895 1116 5881 6105 F 222 79.28 1256 reject_low 1 ALIGNMENT 0 YS2-11h08.q1k vc_4 62 379 5831 5830 F 318 0.00 420 reject_low 5 ALIGNMENT 0 YS2-11h08.p1k chr13 384 367 484464 484463 C 18 0.00 384 accept_chi 1 ALIGNMENT 41 YS2-11h08.q1k vc_4 380 420 5831 5871 F 41 100.00 420 reject_low 5 ALIGNMENT 0 YS2-11h08.q1k vc_3 379 62 2513 2512 C 318 0.00 420 reject_low 4 ALIGNMENT 38 YS2-11h08.q1k vc_7 383 420 13525 13562 F 38 100.00 420 reject_low 7 ALIGNMENT 0 YS2-11h08.q1k vc_2 379 62 2146 2145 C 318 0.00 420 reject_low 3 ALIGNMENT 0 YS2-11h08.q1k vc_5 381 62 5064 5063 C 320 0.00 420 reject_low 6 ALIGNMENT 41 YS2-11h08.q1k vc_1 420 380 2472 2512 C 41 100.00 420 reject_low 2 ALIGNMENT 41 YS2-11h08.q1k vc_3 420 380 2472 2512 C 41 100.00 420 reject_low 4 ALIGNMENT 335 YS2-11h08.q1k chr13 41 380 484466 484804 F 340 99.71 420 accept_chi 0 ALIGNMENT 41 YS2-11h08.q1k vc_2 420 380 2105 2145 C 41 100.00 420 reject_low 3 ALIGNMENT 39 YS2-11h08.q1k vc_5 420 382 5025 5063 C 39 100.00 420 reject_low 6 ALIGNMENT 332 YS2-11h08.p1k chr13 366 27 484463 484804 C 340 99.41 384 accept_chi 1 ALIGNMENT 0 YS2-11h08.q1k chr13 381 420 484804 484803 F 40 0.00 420 accept_chi 0 ALIGNMENT 0 YS2-11h08.q1k vc_5 381 62 37 36 C 320 0.00 420 reject_low 8 ALIGNMENT 0 YS2-11h08.q1k vc_1 379 62 2513 2512 C 318 0.00 420 reject_low 2 ALIGNMENT 36 YS2-11h08.q1k vc_5 417 382 1 36 C 36 100.00 420 reject_low 8 ALIGNMENT 0 YS2-11h08.q1k vc_7 62 382 13525 13524 F 321 0.00 420 reject_low 7 ALIGNMENT 983 YS2-11h09.q1k chr14 1182 38 592732 593885 C 1145 95.98 1204 accept 0 ALIGNMENT 1042 YS2-11h09.p1k chr14 27 1184 589687 590851 F 1158 97.06 1241 accept 0 ALIGNMENT 991 YS2-11h11.q1k chr12 38 1156 452607 453712 F 1119 97.14 1156 accept 0 ALIGNMENT 991 YS2-11h11.q1k chr12 38 1156 461744 462849 F 1119 97.14 1156 accept 1 ALIGNMENT 1029 YS2-11h11.p1k chr12 1209 31 465686 466877 C 1179 96.10 1241 accept 1 ALIGNMENT 1029 YS2-11h11.p1k chr12 1209 31 456549 457740 C 1179 96.10 1241 accept 0 ALIGNMENT 186 YS2-11h13.p1k vc_7 886 1253 100 468 F 368 85.33 1258 reject_low 6 ALIGNMENT 183 YS2-11h13.p1k vc_4 886 1170 5871 6153 F 285 89.82 1258 reject_low 8 ALIGNMENT 0 YS2-11h13.p1k vc_7 62 885 13562 13561 F 824 0.00 1258 reject_low 7 ALIGNMENT 26 YS2-11h13.p1k vc_3 916 886 2441 2472 C 31 96.77 1258 reject_low 10 ALIGNMENT 0 YS2-11h13.p1k vc_3 885 62 2106 2105 C 824 0.00 1258 reject_low 4 ALIGNMENT 0 YS2-11h13.p1k vc_3 885 62 2473 2472 C 824 0.00 1258 reject_low 10 ALIGNMENT 26 YS2-11h13.p1k vc_1 916 886 2441 2472 C 31 96.77 1258 reject_low 9 ALIGNMENT 0 YS2-11h13.p1k vc_5 885 62 5026 5025 C 824 0.00 1258 reject_low 5 ALIGNMENT 0 YS2-11h13.p1k chr07 895 869 127894 127893 C 27 0.00 1258 accept_chi 0 ALIGNMENT 0 YS2-11h13.p1k vc_2 885 62 2106 2105 C 824 0.00 1258 reject_low 3 ALIGNMENT 186 YS2-11h13.p1k vc_7 886 1253 13562 13930 F 368 85.33 1258 reject_low 7 ALIGNMENT 186 YS2-11h13.p1k vc_2 1253 886 1737 2105 C 368 85.33 1258 reject_low 3 ALIGNMENT 186 YS2-11h13.p1k vc_1 1253 886 1737 2105 C 368 85.33 1258 reject_low 2 ALIGNMENT 799 YS2-11h13.p1k chr07 868 27 127893 128735 C 842 99.52 1258 accept_chi 0 ALIGNMENT 186 YS2-11h13.p1k vc_5 1253 886 4657 5025 C 368 85.33 1258 reject_low 5 ALIGNMENT 0 YS2-11h13.p1k vc_1 885 62 2473 2472 C 824 0.00 1258 reject_low 9 ALIGNMENT 186 YS2-11h13.p1k vc_3 1253 886 1737 2105 C 368 85.33 1258 reject_low 4 ALIGNMENT 0 YS2-11h13.p1k vc_4 62 885 5871 5870 F 824 0.00 1258 reject_low 8 ALIGNMENT 0 YS2-11h13.p1k vc_1 885 62 2106 2105 C 824 0.00 1258 reject_low 2 ALIGNMENT 0 YS2-11h13.p1k vc_7 62 885 100 99 F 824 0.00 1258 reject_low 6 ALIGNMENT 788 YS2-11h13.q1k chr07 37 879 127893 128735 F 843 98.81 879 accept_chi 1 ALIGNMENT 543 YS2-11h14.q1k chr12 30 584 489988 490543 F 555 99.46 1170 reject_low 2 ALIGNMENT 959 YS2-11h14.p1k chr12 1072 25 465509 466558 C 1048 96.95 1267 accept 1 ALIGNMENT 1031 YS2-11h14.q1k chr12 30 1164 461157 462301 F 1135 97.27 1170 accept 1 ALIGNMENT 1031 YS2-11h14.q1k chr12 30 1164 452020 453164 F 1135 97.27 1170 accept 0 ALIGNMENT 959 YS2-11h14.p1k chr12 1072 25 456372 457421 C 1048 96.95 1267 accept 0 ALIGNMENT 0 YS2-11h14.q1k chr12 585 835 490543 490542 F 251 0.00 1170 reject_low 2 ALIGNMENT 1000 YS2-11h15.q1k chr12 38 1137 454583 455686 F 1100 97.27 1137 accept 0 ALIGNMENT 1000 YS2-11h15.q1k chr12 38 1137 463720 464823 F 1100 97.27 1137 accept 1 ALIGNMENT 1011 YS2-11h15.p1k chr12 1136 29 456442 457551 C 1108 97.29 1261 accept 0 ALIGNMENT 1011 YS2-11h15.p1k chr12 1136 29 465579 466688 C 1108 97.29 1261 accept 1 ALIGNMENT 992 YS2-11h16.p1k chr08 28 1232 295986 297193 F 1205 94.94 1292 accept 0 ALIGNMENT 907 YS2-11h16.q1k chr08 1102 38 299024 300093 C 1065 95.40 1135 accept 0 ALIGNMENT 173 YS2-11h17.p1k chr15 512 1012 224425 224929 F 501 78.04 1259 reject_low 2 ALIGNMENT 0 YS2-11h17.q1k chr16 1047 62 62930 62929 C 986 0.00 1133 accept_trans 0 ALIGNMENT 39 YS2-11h17.q1k chr16 1091 1048 62887 62929 C 44 97.73 1133 accept_trans 0 ALIGNMENT 559 YS2-11h17.q1k chr16 50 959 63065 63965 F 910 88.79 1133 reject_low 1 ALIGNMENT 0 YS2-11h17.p1k chr15 62 511 224425 224424 F 450 0.00 1259 reject_low 2 ALIGNMENT 894 YS2-11h17.p1k chr16 27 1195 53036 54203 F 1169 93.50 1259 accept_trans 0 ALIGNMENT 979 YS2-11h18.p1k chr16 1221 24 27060 28268 C 1198 94.49 1265 accept 0 ALIGNMENT 0 YS2-11h18.q1k chr13 763 62 917890 917889 C 702 0.00 1144 reject_low 1 ALIGNMENT 301 YS2-11h18.q1k chr13 1132 764 917520 917889 C 369 94.31 1144 reject_low 1 ALIGNMENT 957 YS2-11h18.q1k chr16 39 1132 25027 26120 F 1094 96.44 1144 accept 0 ALIGNMENT 987 YS2-11h19.p1k chr03 74 1242 110705 111871 F 1169 96.15 1308 accept 0 ALIGNMENT 887 YS2-11h19.q1k chr03 1197 38 113716 114873 C 1160 93.79 1199 accept 0 ALIGNMENT 38 YS2-11h20.q1k vc_4 929 969 5831 5871 F 41 97.56 1230 reject_low 8 ALIGNMENT 73 YS2-11h20.q1k vc_4 969 1131 6353 6514 F 163 82.82 1230|1,0 reject_low 8 ALIGNMENT 839 YS2-11h20.q1k chr10 928 33 616447 617343 C 896 99.11 1230 accept_chi 1 ALIGNMENT 73 YS2-11h20.q1k vc_5 969 1131 2398 2559 F 163 82.82 1230 reject_low 5 ALIGNMENT 0 YS2-11h20.q1k vc_5 930 62 37 36 C 869 0.00 1230 reject_low 14 ALIGNMENT 0 YS2-11h20.q1k vc_5 62 968 2398 2397 F 907 0.00 1230 reject_low 5 ALIGNMENT 35 YS2-11h20.q1k vc_7 932 969 13525 13562 F 38 97.37 1230 reject_low 13 ALIGNMENT 72 YS2-11h20.q1k vc_4 1131 969 5651 5812 C 163 83.44 1230 reject_low 6 ALIGNMENT 0 YS2-11h20.q1k vc_4 970 969 5872 6353 F 0 0.00 1230 reject_low 8 ALIGNMENT 33 YS2-11h20.q1k vc_5 966 931 1 36 C 36 97.22 1230 reject_low 14 ALIGNMENT 0 YS2-11h20.q1k vc_3 62 968 2531 2530 F 907 0.00 1230 reject_low 3 ALIGNMENT 0 YS2-11h20.q1k vc_7 968 62 2728 2727 C 907 0.00 1230 reject_low 7 ALIGNMENT 38 YS2-11h20.q1k vc_3 969 929 2472 2512 C 41 97.56 1230 reject_low 11 ALIGNMENT 0 YS2-11h20.q1k vc_4 62 928 5831 5830 F 867 0.00 1230 reject_low 8 ALIGNMENT 38 YS2-11h20.q1k vc_1 969 929 2472 2512 C 41 97.56 1230 reject_low 10 ALIGNMENT 36 YS2-11h20.q1k vc_5 969 931 5025 5063 C 39 97.44 1230 reject_low 12 ALIGNMENT 72 YS2-11h20.q1k vc_7 1131 969 2566 2727 C 163 83.44 1230 reject_low 7 ALIGNMENT 73 YS2-11h20.q1k vc_4 969 1131 126 287 F 163 82.82 1230 reject_low 4 ALIGNMENT 0 YS2-11h20.q1k vc_4 968 62 1535 1534 C 907 0.00 1230 reject_low 9 ALIGNMENT 73 YS2-11h20.q1k vc_1 969 1131 2531 2692 F 163 82.82 1230 reject_low 2 ALIGNMENT 0 YS2-11h20.q1k vc_3 928 62 2513 2512 C 867 0.00 1230 reject_low 11 ALIGNMENT 850 YS2-11h20.p1k chr10 32 928 616447 617343 F 897 99.33 929 accept_chi 0 ALIGNMENT 45 YS2-11h20.q1k vc_4 1056 969 1446 1534 C 88 85.23 1230 reject_low 9 ALIGNMENT 0 YS2-11h20.q1k vc_7 62 931 13525 13524 F 870 0.00 1230 reject_low 13 ALIGNMENT 73 YS2-11h20.q1k vc_3 969 1131 2531 2692 F 163 82.82 1230 reject_low 3 ALIGNMENT 0 YS2-11h20.q1k vc_1 62 968 2531 2530 F 907 0.00 1230 reject_low 2 ALIGNMENT 0 YS2-11h20.q1k vc_1 928 62 2513 2512 C 867 0.00 1230 reject_low 10 ALIGNMENT 0 YS2-11h20.q1k vc_4 62 968 126 125 F 907 0.00 1230 reject_low 4 ALIGNMENT 0 YS2-11h20.q1k vc_5 930 62 5064 5063 C 869 0.00 1230 reject_low 12 ALIGNMENT 0 YS2-11h20.q1k vc_4 968 62 5813 5812 C 907 0.00 1230 reject_low 6 ALIGNMENT 851 YS2-11h21.p1k chr12 52 1154 1039492 1040594 F 1103 93.93 1166 accept 0 ALIGNMENT 370 YS2-11h21.q1k chr12 582 67 1043747 1044254 C 516 92.25 961 accept 0 ALIGNMENT 918 YS2-11h23.q1k chr09 23 1060 234256 235288 F 1038 97.98 1062 accept 0 ALIGNMENT 1023 YS2-11h23.p1k chr09 1201 53 237575 238719 C 1149 97.56 1202 accept 0 ALIGNMENT 0 YS2-11h24.p1k chr15 62 813 427932 427931 F 752 0.00 1183 reject_low 1 ALIGNMENT 0 YS2-11h24.p1k chr11 65 813 576190 576189 F 749 0.00 1183 reject_low 2 ALIGNMENT 0 YS2-11h24.p1k chr12 813 64 281380 281379 C 750 0.00 1183 reject_low 3 ALIGNMENT 20 YS2-11h24.p1k chr15 33 61 427904 427932 F 29 93.10 1183 reject_low 1 ALIGNMENT 886 YS2-11h24.q1k chr12 1076 30 283496 284529 C 1047 96.37 1080 accept 0 ALIGNMENT 21 YS2-11h24.p1k chr12 63 42 281379 281400 C 22 100.00 1183 reject_low 3 ALIGNMENT 22 YS2-11h24.p1k chr11 42 64 576168 576190 F 23 100.00 1183 reject_low 2 ALIGNMENT 1000 YS2-11h24.p1k chr12 31 1137 279908 281014 F 1107 97.56 1183 accept 0 ALIGNMENT 987 YS2-11i01.p1k chr06 35 1174 21437 22582 F 1140 95.79 1178 accept 0 ALIGNMENT 896 YS2-11i01.q1k chr06 1107 36 26771 27834 C 1072 95.52 1107 accept 0 ALIGNMENT 935 YS2-11i02.q1k chr15 1136 37 142718 143809 C 1100 96.55 1140 accept 0 ALIGNMENT 1031 YS2-11i02.p1k chr15 33 1213 142590 143779 F 1181 96.95 1227 accept 0 ALIGNMENT 976 YS2-11i03.q1k chr14 1151 51 296618 297720 C 1101 96.64 1154 accept 0 ALIGNMENT 959 YS2-11i03.p1k chr14 30 1080 293163 294221 F 1051 98.10 1182 accept 0 ALIGNMENT 20 YS2-11i05.p1k chrm 285 344 44189 44241 F 60 83.33 1189 reject_low 4 ALIGNMENT 56 YS2-11i05.q1k chrm 37 140 12743 12845 F 104 85.58 1169 reject_low 3 ALIGNMENT 490 YS2-11i05.q1k chrm 37 1123 4275 5372 F 1087 89.70 1169 accept 0 ALIGNMENT 0 YS2-11i05.p1k chrm 92 329 35111 35110 F 238 0.00 1189 reject_low 2 ALIGNMENT 0 YS2-11i05.p1k chrm 345 958 48000 47999 F 614 0.00 1189 reject_low 5 ALIGNMENT 0 YS2-11i05.p1k chrm 345 958 44241 44240 F 614 0.00 1189 reject_low 4 ALIGNMENT 0 YS2-11i05.p1k chrm 427 958 35204 35203 F 532 0.00 1189 reject_low 2 ALIGNMENT 600 YS2-11i05.p1k chrm 975 30 4577 5518 C 946 95.88 1189 accept 0 ALIGNMENT 395 YS2-11i05.q1k chrm 149 1090 4386 5341 F 942 89.70 1169 reject_low 1 ALIGNMENT 0 YS2-11i05.p1k chrm 92 285 47948 47947 F 194 0.00 1189 reject_low 5 ALIGNMENT 74 YS2-11i05.p1k chrm 330 426 35111 35204 F 97 93.81 1189 reject_low 2 ALIGNMENT 0 YS2-11i05.p1k chrm 92 284 44189 44188 F 193 0.00 1189 reject_low 4 ALIGNMENT 0 YS2-11i05.q1k chrm 141 896 12845 12844 F 756 0.00 1169 reject_low 3 ALIGNMENT 0 YS2-11i05.q1k chrm 62 148 4386 4385 F 87 0.00 1169 reject_low 1 ALIGNMENT 20 YS2-11i05.p1k chrm 286 344 47948 48000 F 59 84.75 1189 reject_low 5 ALIGNMENT 0 YS2-11i05.q1k chrm 896 134 44869 44868 C 763 0.00 1169 reject_low 2 ALIGNMENT 58 YS2-11i05.q1k chrm 133 37 44868 44963 C 97 87.63 1169 reject_low 2 ALIGNMENT 903 YS2-11i06.p1k chr14 1051 33 115602 116624 C 1019 96.76 1234 accept 0 ALIGNMENT 906 YS2-11i06.q1k chr14 24 1077 112077 113142 F 1054 95.92 1167 accept 0 ALIGNMENT 931 YS2-11i07.p1k chr07 28 1130 910346 911463 F 1103 96.46 1177 accept 0 ALIGNMENT 982 YS2-11i07.q1k chr07 1156 28 914452 915573 C 1129 96.72 1157 accept 0 ALIGNMENT 931 YS2-11i08.q1k chr07 1157 39 305915 307041 C 1119 94.82 1163 accept 0 ALIGNMENT 940 YS2-11i08.p1k chr07 30 1175 301772 302933 F 1146 95.29 1259 accept 0 ALIGNMENT 947 YS2-11i09.q1k chr10 1129 35 304575 305670 C 1095 96.71 1188 accept 0 ALIGNMENT 932 YS2-11i09.p1k chr10 29 1120 303947 305046 F 1092 96.61 1255 accept 0 ALIGNMENT 131 YS2-11i10.q1k vc_4 760 912 126 279 F 153 96.08 1206 reject_low 8 ALIGNMENT 0 YS2-11i10.q1k vc_5 721 62 5064 5063 C 660 0.00 1206 reject_low 15 ALIGNMENT 41 YS2-11i10.q1k vc_2 760 720 2105 2145 C 41 100.00 1206 reject_low 13 ALIGNMENT 0 YS2-11i10.q1k vc_5 721 62 37 36 C 660 0.00 1206 reject_low 18 ALIGNMENT 664 YS2-11i10.q1k chr14 35 720 328687 329372 F 686 99.85 1206 accept_chi 1 ALIGNMENT 0 YS2-11i10.q1k vc_7 761 785 13562 13561 F 25 0.00 1206 reject_low 17 ALIGNMENT 0 YS2-11i10.q1k vc_4 761 760 5872 6353 F 0 0.00 1206 reject_low 9 ALIGNMENT 36 YS2-11i10.q1k vc_5 757 722 1 36 C 36 100.00 1206 reject_low 18 ALIGNMENT 0 YS2-11i10.q1k vc_2 62 759 2164 2163 F 698 0.00 1206 reject_low 3 ALIGNMENT 245 YS2-11i10.q1k vc_1 760 1184 2531 2966 F 425 87.06 1206 reject_low 2 ALIGNMENT 0 YS2-11i10.q1k vc_5 785 758 2 1 C 28 0.00 1206 reject_low 18 ALIGNMENT 131 YS2-11i10.q1k vc_4 760 912 6353 6506 F 153 96.08 1206|1,0 reject_low 9 ALIGNMENT 38 YS2-11i10.q1k vc_7 723 760 13525 13562 F 38 100.00 1206 reject_low 17 ALIGNMENT 245 YS2-11i10.q1k vc_7 1184 760 2292 2727 C 425 87.53 1206 reject_low 6 ALIGNMENT 41 YS2-11i10.q1k vc_1 760 720 2472 2512 C 41 100.00 1206 reject_low 12 ALIGNMENT 73 YS2-11i10.q1k vc_4 847 760 1446 1534 C 88 95.45 1206 reject_low 10 ALIGNMENT 0 YS2-11i10.p1k chr14 731 713 328688 328687 C 19 0.00 731 accept_chi 0 ALIGNMENT 664 YS2-11i10.p1k chr14 712 27 328687 329372 C 686 99.85 731 accept_chi 0 ALIGNMENT 41 YS2-11i10.q1k vc_3 760 720 2472 2512 C 41 100.00 1206 reject_low 14 ALIGNMENT 0 YS2-11i10.q1k vc_3 719 62 2513 2512 C 658 0.00 1206 reject_low 14 ALIGNMENT 0 YS2-11i10.q1k vc_7 966 967 5172 6360 C 0 0.00 1206 reject_low 11 ALIGNMENT 38 YS2-11i10.q1k vc_7 967 918 6360 6411 C 50 94.00 1206|1,0 reject_low 11 ALIGNMENT 76 YS2-11i10.q1k vc_7 1184 966 4947 5172 C 219 80.37 1206|0,1 reject_low 11 ALIGNMENT 0 YS2-11i10.q1k vc_1 719 62 2513 2512 C 658 0.00 1206 reject_low 12 ALIGNMENT 0 YS2-11i10.q1k vc_3 785 761 2473 2472 C 25 0.00 1206 reject_low 14 ALIGNMENT 238 YS2-11i10.q1k vc_4 1184 760 5375 5812 C 425 87.06 1206 reject_low 7 ALIGNMENT 0 YS2-11i10.q1k chr14 721 785 329372 329371 F 65 0.00 1206 accept_chi 1 ALIGNMENT 41 YS2-11i10.q1k vc_4 720 760 5831 5871 F 41 100.00 1206 reject_low 9 ALIGNMENT 0 YS2-11i10.q1k vc_4 759 62 1535 1534 C 698 0.00 1206 reject_low 10 ALIGNMENT 0 YS2-11i10.q1k vc_7 62 722 13525 13524 F 661 0.00 1206 reject_low 17 ALIGNMENT 0 YS2-11i10.q1k vc_1 62 759 2531 2530 F 698 0.00 1206 reject_low 2 ALIGNMENT 245 YS2-11i10.q1k vc_5 760 1184 2398 2833 F 425 87.06 1206 reject_low 5 ALIGNMENT 0 YS2-11i10.q1k vc_4 62 719 5831 5830 F 658 0.00 1206 reject_low 9 ALIGNMENT 0 YS2-11i10.q1k vc_5 785 761 5026 5025 C 25 0.00 1206 reject_low 15 ALIGNMENT 0 YS2-11i10.q1k vc_2 719 62 2146 2145 C 658 0.00 1206 reject_low 13 ALIGNMENT 245 YS2-11i10.q1k vc_2 760 1184 2164 2599 F 425 87.06 1206 reject_low 3 ALIGNMENT 0 YS2-11i10.q1k vc_7 759 62 2728 2727 C 698 0.00 1206 reject_low 6 ALIGNMENT 0 YS2-11i10.q1k vc_4 759 62 5813 5812 C 698 0.00 1206 reject_low 7 ALIGNMENT 0 YS2-11i10.q1k vc_5 62 759 2398 2397 F 698 0.00 1206 reject_low 5 ALIGNMENT 39 YS2-11i10.q1k vc_5 760 722 5025 5063 C 39 100.00 1206 reject_low 15 ALIGNMENT 0 YS2-11i10.q1k vc_4 62 759 126 125 F 698 0.00 1206 reject_low 8 ALIGNMENT 0 YS2-11i10.q1k vc_2 785 761 2106 2105 C 25 0.00 1206 reject_low 13 ALIGNMENT 0 YS2-11i10.q1k vc_1 785 761 2473 2472 C 25 0.00 1206 reject_low 12 ALIGNMENT 0 YS2-11i10.q1k vc_3 62 759 2531 2530 F 698 0.00 1206 reject_low 4 ALIGNMENT 0 YS2-11i10.q1k vc_7 761 785 100 99 F 25 0.00 1206 reject_low 16 ALIGNMENT 0 YS2-11i10.q1k vc_7 917 62 6412 6411 C 856 0.00 1206 reject_low 11 ALIGNMENT 245 YS2-11i10.q1k vc_3 760 1184 2531 2966 F 425 87.06 1206 reject_low 4 ALIGNMENT 0 YS2-11i10.q1k vc_7 62 722 63 62 F 661 0.00 1206 reject_low 16 ALIGNMENT 38 YS2-11i10.q1k vc_7 723 760 63 100 F 38 100.00 1206 reject_low 16 ALIGNMENT 38 YS2-11i11.q1k vc_7 197 234 13525 13562 F 38 100.00 234 reject_low 5 ALIGNMENT 0 YS2-11i11.q1k vc_5 195 62 5064 5063 C 134 0.00 234 reject_low 4 ALIGNMENT 0 YS2-11i11.q1k vc_7 62 196 13525 13524 F 135 0.00 234 reject_low 5 ALIGNMENT 0 YS2-11i11.q1k vc_3 193 62 2513 2512 C 132 0.00 234 reject_low 2 ALIGNMENT 0 YS2-11i11.q1k vc_1 193 62 2513 2512 C 132 0.00 234 reject_low 1 ALIGNMENT 0 YS2-11i11.q1k vc_5 195 62 37 36 C 134 0.00 234 reject_low 6 ALIGNMENT 41 YS2-11i11.q1k vc_1 234 194 2472 2512 C 41 100.00 234 reject_low 1 ALIGNMENT 36 YS2-11i11.q1k vc_5 231 196 1 36 C 36 100.00 234 reject_low 6 ALIGNMENT 39 YS2-11i11.q1k vc_5 234 196 5025 5063 C 39 100.00 234 reject_low 4 ALIGNMENT 41 YS2-11i11.q1k vc_4 194 234 5831 5871 F 41 100.00 234 reject_low 3 ALIGNMENT 0 YS2-11i11.q1k chr12 194 234 460006 460005 F 41 0.00 234 accept 0 ALIGNMENT 0 YS2-11i11.q1k vc_4 62 193 5831 5830 F 132 0.00 234 reject_low 3 ALIGNMENT 153 YS2-11i11.q1k chr12 25 193 459838 460006 F 169 98.22 234 accept 0 ALIGNMENT 41 YS2-11i11.q1k vc_3 234 194 2472 2512 C 41 100.00 234 reject_low 2 ALIGNMENT 1036 YS2-11i12.q1k chr02 1339 31 233889 235193 C 1309 94.73 1346 accept 0 ALIGNMENT 0 YS2-11i14.p1k chr15 62 267 526563 526562 F 206 0.00 1276 accept 0 ALIGNMENT 754 YS2-11i14.p1k chr15 268 1181 526563 527472 F 914 94.20 1276 accept 0 ALIGNMENT 234 YS2-11i14.p1k chr10 268 28 499235 499475 C 241 99.59 1276 reject_low 1 ALIGNMENT 997 YS2-11i14.q1k chr15 1190 35 529072 530222 C 1156 96.71 1198 accept 0 ALIGNMENT 0 YS2-11i14.p1k chr10 855 269 499236 499235 C 587 0.00 1276 reject_low 1 ALIGNMENT 0 YS2-11i14.p1k chr14 386 62 423019 423018 C 325 0.00 1276 reject_low 2 ALIGNMENT 61 YS2-11i14.p1k chr14 929 387 422476 423018 C 543 72.19 1276 reject_low 2 ALIGNMENT 674 YS2-11i15.q1k chr12 385 1142 452955 453717 F 758 96.70 1147 accept 0 ALIGNMENT 0 YS2-11i15.q1k chr15 834 386 463177 463176 C 449 0.00 1147 reject_low 2 ALIGNMENT 0 YS2-11i15.q1k chr12 62 384 462092 462091 F 323 0.00 1147 accept 1 ALIGNMENT 789 YS2-11i15.p1k chr12 1147 20 458077 459168 C 1128 93.09 1186 accept 0 ALIGNMENT 674 YS2-11i15.q1k chr12 385 1142 462092 462854 F 758 96.70 1147 accept 1 ALIGNMENT 789 YS2-11i15.p1k chr12 1147 20 467214 468305 C 1128 93.09 1186 accept 1 ALIGNMENT 0 YS2-11i15.q1k chr12 62 384 452955 452954 F 323 0.00 1147 accept 0 ALIGNMENT 325 YS2-11i15.q1k chr15 385 25 463176 463536 C 361 98.06 1147 reject_low 2 ALIGNMENT 1028 YS2-11i16.q1k chr16 38 1190 112047 113203 F 1153 96.79 1190 accept 0 ALIGNMENT 951 YS2-11i16.p1k chr16 1060 27 112180 113222 C 1034 97.49 1246 accept 0 ALIGNMENT 959 YS2-11i17.p1k chr15 1143 59 953633 954729 C 1085 97.05 1230 accept 0 ALIGNMENT 972 YS2-11i17.q1k chr15 34 1120 950456 951543 F 1087 97.61 1120 accept 0 ALIGNMENT 905 YS2-11i18.q1k chr14 28 1140 112077 113204 F 1113 94.43 1142 accept 0 ALIGNMENT 971 YS2-11i19.q1k chr05 25 1105 146527 147608 F 1081 97.78 1115 accept 0 ALIGNMENT 933 YS2-11i19.p1k chr05 1186 36 151049 152199 C 1151 95.83 1199 accept 0 ALIGNMENT 36 YS2-11i20.q1k vc_5 236 201 1 36 C 36 100.00 239 reject_low 7 ALIGNMENT 0 YS2-11i20.q1k vc_5 200 62 37 36 C 139 0.00 239 reject_low 7 ALIGNMENT 0 YS2-11i20.q1k vc_7 62 201 13525 13524 F 140 0.00 239 reject_low 6 ALIGNMENT 154 YS2-11i20.q1k chr07 30 198 878098 878266 F 169 98.22 239 accept_chi 0 ALIGNMENT 41 YS2-11i20.q1k vc_1 239 199 2472 2512 C 41 100.00 239 reject_low 2 ALIGNMENT 41 YS2-11i20.q1k vc_4 199 239 5831 5871 F 41 100.00 239 reject_low 4 ALIGNMENT 0 YS2-11i20.q1k vc_1 198 62 2513 2512 C 137 0.00 239 reject_low 2 ALIGNMENT 0 YS2-11i20.p1k chr07 210 194 878099 878098 C 17 0.00 210 accept_chi 1 ALIGNMENT 0 YS2-11i20.q1k vc_3 198 62 2513 2512 C 137 0.00 239 reject_low 3 ALIGNMENT 0 YS2-11i20.q1k vc_4 62 198 5831 5830 F 137 0.00 239 reject_low 4 ALIGNMENT 146 YS2-11i20.p1k chr07 193 26 878098 878266 C 168 97.02 210 accept_chi 1 ALIGNMENT 0 YS2-11i20.q1k vc_5 200 62 5064 5063 C 139 0.00 239 reject_low 5 ALIGNMENT 41 YS2-11i20.q1k vc_3 239 199 2472 2512 C 41 100.00 239 reject_low 3 ALIGNMENT 0 YS2-11i20.q1k chr07 199 239 878266 878265 F 41 0.00 239 accept_chi 0 ALIGNMENT 38 YS2-11i20.q1k vc_7 202 239 13525 13562 F 38 100.00 239 reject_low 6 ALIGNMENT 39 YS2-11i20.q1k vc_5 239 201 5025 5063 C 39 100.00 239 reject_low 5 ALIGNMENT 993 YS2-11i21.q1k chr07 1094 30 838893 839958 C 1065 98.59 1101 accept 0 ALIGNMENT 890 YS2-11i21.p1k chr07 50 1106 838702 839772 F 1057 96.12 1166 accept 0 ALIGNMENT 0 YS2-11i22.q1k chrm 274 329 4132 4131 F 56 0.00 329 ambiguous 9 ALIGNMENT 0 YS2-11i22.p1k chrm 334 190 4018 4017 C 145 0.00 334 reject_low 7 ALIGNMENT 0 YS2-11i22.q1k chrm 329 271 83572 83571 C 59 0.00 329 ambiguous 15 ALIGNMENT 0 YS2-11i22.q1k vc_1 288 62 2513 2512 C 227 0.00 329 reject_vc 2 ALIGNMENT 41 YS2-11i22.q1k vc_4 289 329 5831 5871 F 41 100.00 329 reject_vc 5 ALIGNMENT 0 YS2-11i22.q1k vc_4 62 288 5831 5830 F 227 0.00 329 reject_vc 5 ALIGNMENT 32 YS2-11i22.q1k chrm 43 289 56417 56665 F 247 81.78 329 ambiguous 12 ALIGNMENT 0 YS2-11i22.q1k chrm 243 329 3735 3734 F 87 0.00 329 reject_low 7 ALIGNMENT 0 YS2-11i22.q1k chrm 160 62 83682 83681 C 99 0.00 329 ambiguous 15 ALIGNMENT 0 YS2-11i22.q1k chrm 62 159 3655 3654 F 98 0.00 329 reject_low 7 ALIGNMENT 0 YS2-11i22.p1k chrm 189 334 32496 32495 F 146 0.00 334 ambiguous 8 ALIGNMENT 41 YS2-11i22.q1k vc_2 329 289 2105 2145 C 41 100.00 329 reject_vc 3 ALIGNMENT 0 YS2-11i22.q1k chrm 290 329 56665 56664 F 40 0.00 329 ambiguous 12 ALIGNMENT 0 YS2-11i22.p1k chrm 334 306 56418 56417 C 29 0.00 334 ambiguous 10 ALIGNMENT 38 YS2-11i22.q1k vc_7 292 329 13525 13562 F 38 100.00 329 reject_vc 6 ALIGNMENT 41 YS2-11i22.q1k vc_3 329 289 2472 2512 C 41 100.00 329 reject_vc 4 ALIGNMENT 20 YS2-11i22.q1k chrm 35 283 12393 12641 F 249 81.12 329 ambiguous 14 ALIGNMENT 0 YS2-11i22.p1k chrm 334 269 52153 52152 C 66 0.00 334 ambiguous 11 ALIGNMENT 184 YS2-11i22.p1k chrm 59 315 30456 30711 F 257 99.22 334 ambiguous 0 ALIGNMENT 37 YS2-11i22.q1k chrm 160 242 3655 3735 F 83 86.75 329 reject_low 7 ALIGNMENT 0 YS2-11i22.p1k chrm 118 62 52302 52301 C 57 0.00 334 ambiguous 11 ALIGNMENT 0 YS2-11i22.q1k chrm 329 290 30457 30456 C 40 0.00 329 ambiguous 1 ALIGNMENT 0 YS2-11i22.p1k chrm 334 189 3656 3655 C 146 0.00 334 ambiguous 13 ALIGNMENT 0 YS2-11i22.p1k chrm 105 62 3736 3735 C 44 0.00 334 ambiguous 13 ALIGNMENT 0 YS2-11i22.q1k vc_7 62 291 13525 13524 F 230 0.00 329 reject_vc 6 ALIGNMENT 0 YS2-11i22.q1k vc_2 288 62 2146 2145 C 227 0.00 329 reject_vc 3 ALIGNMENT 185 YS2-11i22.q1k chrm 289 33 30456 30711 C 257 99.61 329 ambiguous 1 ALIGNMENT 41 YS2-11i22.q1k vc_1 329 289 2472 2512 C 41 100.00 329 reject_vc 2 ALIGNMENT 54 YS2-11i22.p1k chrm 189 75 4017 4132 C 115 88.70 334 reject_low 7 ALIGNMENT 31 YS2-11i22.p1k chrm 305 59 56417 56665 C 247 81.38 334 ambiguous 10 ALIGNMENT 27 YS2-11i22.q1k chrm 270 161 83571 83681 C 110 81.82 329 ambiguous 15 ALIGNMENT 37 YS2-11i22.p1k chrm 188 106 3655 3735 C 83 86.75 334 ambiguous 13 ALIGNMENT 56 YS2-11i22.q1k chrm 159 273 4017 4132 F 115 89.57 329 ambiguous 9 ALIGNMENT 0 YS2-11i22.q1k vc_3 288 62 2513 2512 C 227 0.00 329 reject_vc 4 ALIGNMENT 35 YS2-11i22.p1k chrm 268 119 52152 52301 C 150 82.00 334 ambiguous 11 ALIGNMENT 53 YS2-11i22.p1k chrm 59 188 32367 32496 F 130 87.69 334 ambiguous 8 ALIGNMENT 0 YS2-11i22.q1k chrm 62 158 4017 4016 F 97 0.00 329 ambiguous 9 ALIGNMENT 0 YS2-11i22.p1k chrm 316 334 30711 30710 F 19 0.00 334 ambiguous 0 ALIGNMENT 0 YS2-11i22.q1k chrm 284 329 12641 12640 F 46 0.00 329 ambiguous 14 ALIGNMENT 257 YS2-11i23.p1k chr08 38 310 357216 357488 F 273 98.90 328 accept_chi 0 ALIGNMENT 41 YS2-11i23.q1k vc_1 345 305 2472 2512 C 41 100.00 345 reject_low 2 ALIGNMENT 39 YS2-11i23.q1k vc_5 345 307 5025 5063 C 39 100.00 345 reject_low 5 ALIGNMENT 0 YS2-11i23.q1k vc_5 306 62 5064 5063 C 245 0.00 345 reject_low 5 ALIGNMENT 38 YS2-11i23.q1k vc_7 308 345 13525 13562 F 38 100.00 345 reject_low 6 ALIGNMENT 41 YS2-11i23.q1k vc_3 345 305 2472 2512 C 41 100.00 345 reject_low 3 ALIGNMENT 0 YS2-11i23.q1k chr08 345 306 357217 357216 C 40 0.00 345 accept_chi 1 ALIGNMENT 0 YS2-11i23.q1k vc_3 304 62 2513 2512 C 243 0.00 345 reject_low 3 ALIGNMENT 247 YS2-11i23.q1k chr08 305 35 357216 357488 C 271 98.15 345 accept_chi 1 ALIGNMENT 36 YS2-11i23.q1k vc_5 342 307 1 36 C 36 100.00 345 reject_low 7 ALIGNMENT 0 YS2-11i23.q1k vc_4 62 304 5831 5830 F 243 0.00 345 reject_low 4 ALIGNMENT 0 YS2-11i23.q1k vc_7 62 307 13525 13524 F 246 0.00 345 reject_low 6 ALIGNMENT 0 YS2-11i23.p1k chr08 311 328 357488 357487 F 18 0.00 328 accept_chi 0 ALIGNMENT 41 YS2-11i23.q1k vc_4 305 345 5831 5871 F 41 100.00 345 reject_low 4 ALIGNMENT 0 YS2-11i23.q1k vc_5 306 62 37 36 C 245 0.00 345 reject_low 7 ALIGNMENT 0 YS2-11i23.q1k vc_1 304 62 2513 2512 C 243 0.00 345 reject_low 2 ALIGNMENT 0 YS2-11i24.q1k chr12 182 62 490544 490543 C 121 0.00 1059 reject_low 3 ALIGNMENT 730 YS2-11i24.q1k chr12 959 183 489767 490543 C 777 98.07 1059 reject_low 3 ALIGNMENT 953 YS2-11i24.q1k chr12 1059 28 460834 461868 C 1032 97.38 1059 accept 0 ALIGNMENT 953 YS2-11i24.q1k chr12 1059 28 451697 452731 C 1032 97.38 1059 reject_low 2 ALIGNMENT 1072 YS2-11i24.p1k chr12 33 1180 457295 458446 F 1148 98.26 1184 accept 0 ALIGNMENT 1072 YS2-11i24.p1k chr12 33 1180 466432 467583 F 1148 98.26 1184 reject_low 1 ALIGNMENT 0 YS2-11j01.q1k vc_5 426 62 37 36 C 365 0.00 465 reject_low 7 ALIGNMENT 41 YS2-11j01.q1k vc_3 465 425 2472 2512 C 41 100.00 465 reject_low 3 ALIGNMENT 0 YS2-11j01.q1k vc_4 62 424 5831 5830 F 363 0.00 465 reject_low 4 ALIGNMENT 0 YS2-11j01.q1k vc_1 424 62 2513 2512 C 363 0.00 465 reject_low 2 ALIGNMENT 377 YS2-11j01.p1k chr11 34 425 238162 238553 F 392 99.49 443 accept_chi 1 ALIGNMENT 0 YS2-11j01.q1k chr11 465 425 238157 238156 C 41 0.00 465 accept_chi 0 ALIGNMENT 39 YS2-11j01.q1k vc_5 465 427 5025 5063 C 39 100.00 465 reject_low 5 ALIGNMENT 41 YS2-11j01.q1k vc_4 425 465 5831 5871 F 41 100.00 465 reject_low 4 ALIGNMENT 36 YS2-11j01.q1k vc_5 462 427 1 36 C 36 100.00 465 reject_low 7 ALIGNMENT 379 YS2-11j01.q1k chr11 424 28 238156 238553 C 397 99.24 465 accept_chi 0 ALIGNMENT 0 YS2-11j01.q1k vc_5 426 62 5064 5063 C 365 0.00 465 reject_low 5 ALIGNMENT 0 YS2-11j01.p1k chr11 426 443 238553 238552 F 18 0.00 443 accept_chi 1 ALIGNMENT 38 YS2-11j01.q1k vc_7 428 465 13525 13562 F 38 100.00 465 reject_low 6 ALIGNMENT 0 YS2-11j01.q1k vc_7 62 427 13525 13524 F 366 0.00 465 reject_low 6 ALIGNMENT 41 YS2-11j01.q1k vc_1 465 425 2472 2512 C 41 100.00 465 reject_low 2 ALIGNMENT 0 YS2-11j01.q1k vc_3 424 62 2513 2512 C 363 0.00 465 reject_low 3 ALIGNMENT 1061 YS2-11j02.p1k chr05 30 1221 118910 120107 F 1192 96.64 1221 accept 0 ALIGNMENT 1024 YS2-11j02.q1k chr05 1117 26 123393 124482 C 1092 98.35 1123 accept 0 ALIGNMENT 1008 YS2-11j03.q1k chr05 30 1158 356438 357571 F 1129 97.61 1158 accept 0 ALIGNMENT 944 YS2-11j03.p1k chr05 1125 28 356947 358061 C 1098 96.99 1219 accept 0 ALIGNMENT 26 YS2-11j04.q1k chr12 581 556 510421 510446 C 26 100.00 1207 reject_low 1 ALIGNMENT 565 YS2-11j04.q1k chr12 38 635 509902 510500 F 598 98.49 1207|0,5 reject_bad_break 0 ALIGNMENT 0 YS2-11j04.q1k chr12 555 62 510447 510446 C 494 0.00 1207 reject_low 1 ALIGNMENT 0 YS2-11j04.q1k chr12 631 630 510496 510547 F 0 0.00 1207 reject_bad_break 0 ALIGNMENT 975 YS2-11j04.p1k chr12 1152 27 512361 513497 C 1126 96.00 1232 reject_bad_break 0 ALIGNMENT 0 YS2-11j04.q1k chr12 831 582 510422 510421 C 250 0.00 1207 reject_low 1 ALIGNMENT 307 YS2-11j04.q1k chr12 626 1120 510543 511015 F 495 89.90 1207|5,0 reject_bad_break 0 ALIGNMENT 632 YS2-11j05.p1k chr16 30 714 871870 872555 F 685 99.12 1299 reject_low 1 ALIGNMENT 1014 YS2-11j05.q1k chr06 38 1198 195400 196567 F 1161 96.21 1209 accept 0 ALIGNMENT 0 YS2-11j05.p1k chr16 715 898 872555 872554 F 184 0.00 1299 reject_low 1 ALIGNMENT 282 YS2-11j05.p1k chr06 1108 714 199459 199849 C 395 92.66 1299 accept 0 ALIGNMENT 0 YS2-11j05.p1k chr06 713 62 199850 199849 C 652 0.00 1299 accept 0 ALIGNMENT 0 YS2-11j06.p1k chr14 240 257 373596 373595 F 18 0.00 257 accept_chi 0 ALIGNMENT 0 YS2-11j06.q1k vc_5 248 62 37 36 C 187 0.00 287 reject_low 8 ALIGNMENT 0 YS2-11j06.q1k vc_2 246 62 2146 2145 C 185 0.00 287 reject_low 3 ALIGNMENT 0 YS2-11j06.q1k vc_1 246 62 2513 2512 C 185 0.00 287 reject_low 2 ALIGNMENT 38 YS2-11j06.q1k vc_7 250 287 13525 13562 F 38 100.00 287 reject_low 7 ALIGNMENT 0 YS2-11j06.q1k vc_5 248 62 5064 5063 C 187 0.00 287 reject_low 6 ALIGNMENT 0 YS2-11j06.q1k vc_4 62 246 5831 5830 F 185 0.00 287 reject_low 5 ALIGNMENT 41 YS2-11j06.q1k vc_1 287 247 2472 2512 C 41 100.00 287 reject_low 2 ALIGNMENT 0 YS2-11j06.q1k chr14 287 248 373383 373382 C 40 0.00 287 accept_chi 1 ALIGNMENT 41 YS2-11j06.q1k vc_2 287 247 2105 2145 C 41 100.00 287 reject_low 3 ALIGNMENT 0 YS2-11j06.q1k vc_7 62 249 13525 13524 F 188 0.00 287 reject_low 7 ALIGNMENT 0 YS2-11j06.q1k vc_3 246 62 2513 2512 C 185 0.00 287 reject_low 4 ALIGNMENT 41 YS2-11j06.q1k vc_4 247 287 5831 5871 F 41 100.00 287 reject_low 5 ALIGNMENT 36 YS2-11j06.q1k vc_5 284 249 1 36 C 36 100.00 287 reject_low 8 ALIGNMENT 39 YS2-11j06.q1k vc_5 287 249 5025 5063 C 39 100.00 287 reject_low 6 ALIGNMENT 215 YS2-11j06.p1k chr14 25 239 373382 373596 F 215 100.00 257 accept_chi 0 ALIGNMENT 41 YS2-11j06.q1k vc_3 287 247 2472 2512 C 41 100.00 287 reject_low 4 ALIGNMENT 215 YS2-11j06.q1k chr14 247 33 373382 373596 C 215 100.00 287 accept_chi 1 ALIGNMENT 1039 YS2-11j07.q1k chr04 31 1174 516917 518061 F 1144 97.81 1184 ambiguous_trans 3 ALIGNMENT 0 YS2-11j07.p1k chr07 887 444 817207 817206 C 444 0.00 1223 reject_low 46 ALIGNMENT 62 YS2-11j07.p1k chr07 443 263 817206 817387 C 181 82.32 1223 reject_low 46 ALIGNMENT 206 YS2-11j07.q1k chr13 704 35 186235 186904 C 670 77.61 1184 ambiguous_trans 40 ALIGNMENT 0 YS2-11j07.p1k chr13 62 259 357024 357023 F 198 0.00 1223 reject_low 32 ALIGNMENT 308 YS2-11j07.p1k chr08 240 574 549306 549640 F 335 99.40 1223 reject_low 17 ALIGNMENT 0 YS2-11j07.p1k chr08 572 887 543941 543940 F 316 0.00 1223 reject_low 15 ALIGNMENT 283 YS2-11j07.p1k chr13 260 571 357024 357335 F 312 99.04 1223 reject_low 32 ALIGNMENT 0 YS2-11j07.p1k chr07 62 239 822980 822979 F 178 0.00 1223 reject_low 16 ALIGNMENT 0 YS2-11j07.p1k chr01 572 887 166163 166162 F 316 0.00 1223 reject_low 44 ALIGNMENT 0 YS2-11j07.p1k chr15 887 574 594820 594819 C 314 0.00 1223 reject_low 18 ALIGNMENT 283 YS2-11j07.p1k chr02 571 260 226624 226935 C 312 99.04 1223 reject_low 30 ALIGNMENT 0 YS2-11j07.p1k chr15 323 62 594760 594759 C 262 0.00 1223 reject_low 45 ALIGNMENT 0 YS2-11j07.p1k chr14 541 62 102579 102578 C 480 0.00 1223 reject_low 47 ALIGNMENT 289 YS2-11j07.p1k chr14 260 571 102212 102523 F 312 99.68 1223 reject_low 27 ALIGNMENT 0 YS2-11j07.p1k chr04 239 62 1096100 1096099 C 178 0.00 1223 reject_low 28 ALIGNMENT 0 YS2-11j07.p1k chr02 239 62 265493 265492 C 178 0.00 1223 reject_low 23 ALIGNMENT 0 YS2-11j07.p1k chr15 239 62 595153 595152 C 178 0.00 1223 reject_low 18 ALIGNMENT 192 YS2-11j07.p1k chr01 260 571 165847 166163 F 312 89.74 1223 reject_low 44 ALIGNMENT 0 YS2-11j07.p1k chr13 572 887 357335 357334 F 316 0.00 1223 reject_low 32 ALIGNMENT 0 YS2-11j07.p1k chr01 62 259 165847 165846 F 198 0.00 1223 reject_low 44 ALIGNMENT 0 YS2-11j07.p1k chr15 887 454 594631 594630 C 434 0.00 1223 reject_low 45 ALIGNMENT 225 YS2-11j07.q1k chr02 1121 160 222692 223651 C 962 75.26 1184 ambiguous_trans 38 ALIGNMENT 0 YS2-11j07.p1k chr07 887 572 931692 931691 C 316 0.00 1223 reject_low 31 ALIGNMENT 1042 YS2-11j07.q1k chr06 1174 31 139490 140634 C 1144 97.90 1184 ambiguous_trans 1 ALIGNMENT 247 YS2-11j07.q1k chr10 1121 35 474033 475117 C 1087 75.07 1184 ambiguous_trans 35 ALIGNMENT 284 YS2-11j07.p1k chr13 236 571 372692 373033 F 336 97.02 1223 reject_low 25 ALIGNMENT 203 YS2-11j07.q1k chr15 704 35 596886 597555 C 670 77.46 1184 ambiguous_trans 41 ALIGNMENT 0 YS2-11j07.p1k chr02 239 62 259908 259907 C 178 0.00 1223 reject_low 22 ALIGNMENT 0 YS2-11j07.p1k chr02 259 62 226936 226935 C 198 0.00 1223 reject_low 30 ALIGNMENT 0 YS2-11j07.p1k chr14 62 259 102212 102211 F 198 0.00 1223 reject_low 27 ALIGNMENT 0 YS2-11j07.p1k chr02 887 572 265162 265161 C 316 0.00 1223 reject_low 23 ALIGNMENT 250 YS2-11j07.q1k chr10 1121 35 479617 480701 C 1087 75.16 1184 ambiguous_trans 34 ALIGNMENT 0 YS2-11j07.p1k chr02 887 573 259576 259575 C 315 0.00 1223 reject_low 22 ALIGNMENT 305 YS2-11j07.p1k chr13 571 240 184170 184501 C 332 99.40 1223 reject_low 21 ALIGNMENT 200 YS2-11j07.q1k chr08 35 704 546789 547458 F 670 77.31 1184 ambiguous_trans 42 ALIGNMENT 308 YS2-11j07.p1k chr13 571 240 189752 190083 C 332 99.70 1223 reject_low 20 ALIGNMENT 195 YS2-11j07.p1k chr03 239 33 227803 228007 C 207 99.03 1223 reject_bad_break 0 ALIGNMENT 1039 YS2-11j07.q1k chr07 34 1174 571981 573122 F 1141 97.90 1184 ambiguous_trans 7 ALIGNMENT 307 YS2-11j07.p1k chr15 573 240 594819 595152 C 334 99.40 1223 reject_low 18 ALIGNMENT 308 YS2-11j07.p1k chr07 240 574 822980 823314 F 335 99.40 1223 reject_low 16 ALIGNMENT 280 YS2-11j07.p1k chr04 572 240 1095761 1096099 C 333 97.00 1223 reject_low 28 ALIGNMENT 0 YS2-11j07.p1k chr07 62 232 817391 817390 F 171 0.00 1223 reject_low 14 ALIGNMENT 0 YS2-11j07.p1k chr13 239 62 184502 184501 C 178 0.00 1223 reject_low 21 ALIGNMENT 0 YS2-11j07.q1k chr13 866 705 186236 186235 C 162 0.00 1184 ambiguous_trans 40 ALIGNMENT 0 YS2-11j07.p1k chr13 887 572 184171 184170 C 316 0.00 1223 reject_low 21 ALIGNMENT 0 YS2-11j07.p1k chr08 62 239 549306 549305 F 178 0.00 1223 reject_low 17 ALIGNMENT 0 YS2-11j07.p1k chr07 262 62 817388 817387 C 201 0.00 1223 reject_low 46 ALIGNMENT 303 YS2-11j07.p1k chr02 572 240 259575 259907 C 333 99.10 1223 reject_low 22 ALIGNMENT 204 YS2-11j07.q1k chr04 1121 160 804549 805508 C 962 74.53 1184 ambiguous_trans_ua 39 ALIGNMENT 276 YS2-11j07.p1k chr15 577 240 117696 118039 C 338 96.15 1223 reject_low 24 ALIGNMENT 311 YS2-11j07.p1k chr08 235 571 543605 543941 F 337 99.41 1223 reject_low 15 ALIGNMENT 0 YS2-11j07.p1k chr15 887 578 117697 117696 C 310 0.00 1223 reject_low 24 ALIGNMENT 0 YS2-11j07.p1k chr13 239 62 190084 190083 C 178 0.00 1223 reject_low 20 ALIGNMENT 0 YS2-11j07.p1k chr13 887 572 189753 189752 C 316 0.00 1223 reject_low 20 ALIGNMENT 0 YS2-11j07.p1k chr13 62 235 372692 372691 F 174 0.00 1223 reject_low 25 ALIGNMENT 0 YS2-11j07.p1k chr14 572 887 102523 102522 F 316 0.00 1223 reject_low 27 ALIGNMENT 1030 YS2-11j07.q1k chr04 1174 31 873398 874542 C 1144 97.55 1184 ambiguous_trans 8 ALIGNMENT 1024 YS2-11j07.q1k chr02 1174 31 31223 32367 C 1144 97.38 1184 ambiguous_trans 12 ALIGNMENT 0 YS2-11j07.p1k chr01 62 259 160259 160258 F 198 0.00 1223 reject_low 43 ALIGNMENT 0 YS2-11j07.p1k chr13 572 887 373033 373032 F 316 0.00 1223 reject_low 25 ALIGNMENT 1036 YS2-11j07.q1k chr03 1174 31 86392 87536 C 1144 97.73 1184 ambiguous_trans 4 ALIGNMENT 0 YS2-11j07.p1k chr02 887 572 226625 226624 C 316 0.00 1223 reject_low 30 ALIGNMENT 1036 YS2-11j07.q1k chr14 31 1174 565266 566410 F 1144 97.73 1184 ambiguous_trans 6 ALIGNMENT 0 YS2-11j07.p1k chr14 887 572 102550 102549 C 316 0.00 1223 reject_low 47 ALIGNMENT 0 YS2-11j07.p1k chr01 572 887 160575 160574 F 316 0.00 1223 reject_low 43 ALIGNMENT 302 YS2-11j07.p1k chr02 571 240 265161 265492 C 332 99.10 1223 reject_low 23 ALIGNMENT 0 YS2-11j07.q1k chr04 159 62 805509 805508 C 98 0.00 1184 ambiguous_trans_ua 39 ALIGNMENT 279 YS2-11j07.p1k chr12 240 571 215081 215418 F 332 96.99 1223 reject_low 29 ALIGNMENT 0 YS2-11j07.p1k chr15 239 62 118040 118039 C 178 0.00 1223 reject_low 24 ALIGNMENT 246 YS2-11j07.q1k chr01 35 1099 163423 164486 F 1065 75.21 1184 ambiguous_trans 36 ALIGNMENT 0 YS2-11j07.p1k chr12 62 239 215081 215080 F 178 0.00 1223 reject_low 29 ALIGNMENT 0 YS2-11j07.p1k chr15 887 572 600404 600403 C 316 0.00 1223 reject_low 19 ALIGNMENT 283 YS2-11j07.p1k chr07 571 260 931691 932002 C 312 99.04 1223 reject_low 31 ALIGNMENT 0 YS2-11j07.p1k chr14 572 887 96941 96940 F 316 0.00 1223 reject_low 26 ALIGNMENT 1024 YS2-11j07.q1k chr04 1174 31 982747 983891 C 1144 97.38 1184 ambiguous_trans 13 ALIGNMENT 0 YS2-11j07.q1k chr15 866 705 596887 596886 C 162 0.00 1184 ambiguous_trans 41 ALIGNMENT 1027 YS2-11j07.q1k chr15 1174 31 971864 973008 C 1144 97.47 1184 ambiguous_trans 11 ALIGNMENT 394 YS2-11j07.p1k chr03 1111 571 227250 227808 C 541 92.79 1223 reject_bad_break 0 ALIGNMENT 192 YS2-11j07.p1k chr01 260 571 160259 160575 F 312 89.74 1223 reject_low 43 ALIGNMENT 0 YS2-11j07.p1k chr07 572 887 817729 817728 F 316 0.00 1223 reject_low 14 ALIGNMENT 0 YS2-11j07.p1k chr08 62 234 543605 543604 F 173 0.00 1223 reject_low 15 ALIGNMENT 1036 YS2-11j07.q1k chr12 1174 31 942771 943915 C 1144 97.73 1184 ambiguous_trans 5 ALIGNMENT 1030 YS2-11j07.q1k chr12 31 1174 978970 980114 F 1144 97.55 1184 ambiguous_trans 9 ALIGNMENT 0 YS2-11j07.p1k chr08 575 887 549640 549639 F 313 0.00 1223 reject_low 17 ALIGNMENT 1042 YS2-11j07.q1k chr07 1174 31 813034 814178 C 1144 97.90 1184 ambiguous_trans 2 ALIGNMENT 0 YS2-11j07.p1k chr04 887 573 1095762 1095761 C 315 0.00 1223 reject_low 28 ALIGNMENT 0 YS2-11j07.p1k chr03 570 240 227809 227802 C 331 0.00 1223 reject_bad_break 0 ALIGNMENT 0 YS2-11j07.p1k chr07 575 887 823314 823313 F 313 0.00 1223 reject_low 16 ALIGNMENT 289 YS2-11j07.p1k chr14 260 571 96630 96941 F 312 99.68 1223 reject_low 26 ALIGNMENT 0 YS2-11j07.p1k chr14 62 259 96630 96629 F 198 0.00 1223 reject_low 26 ALIGNMENT 29 YS2-11j07.p1k chr14 571 542 102549 102578 C 30 100.00 1223 reject_low 47 ALIGNMENT 0 YS2-11j07.q1k chr08 705 866 547458 547457 F 162 0.00 1184 ambiguous_trans 42 ALIGNMENT 307 YS2-11j07.p1k chr15 571 239 600403 600735 C 333 99.40 1223 reject_low 19 ALIGNMENT 0 YS2-11j07.p1k chr15 238 62 600736 600735 C 177 0.00 1223 reject_low 19 ALIGNMENT 253 YS2-11j07.q1k chr13 1121 35 197987 199071 C 1087 75.25 1184 ambiguous_trans 33 ALIGNMENT 0 YS2-11j07.q1k chr02 159 62 223652 223651 C 98 0.00 1184 ambiguous_trans 38 ALIGNMENT 306 YS2-11j07.p1k chr07 233 571 817391 817729 F 339 98.82 1223 reject_low 14 ALIGNMENT 0 YS2-11j07.p1k chr07 259 62 932003 932002 C 198 0.00 1223 reject_low 31 ALIGNMENT 244 YS2-11j07.q1k chr07 35 1121 565028 566112 F 1087 74.98 1184 ambiguous_trans 37 ALIGNMENT 0 YS2-11j07.p1k chr12 572 887 215418 215417 F 316 0.00 1223 reject_low 29 ALIGNMENT 1030 YS2-11j07.q1k chr15 31 1174 707297 708441 F 1144 97.55 1184 ambiguous_trans 10 ALIGNMENT 85 YS2-11j07.p1k chr15 453 324 594630 594759 C 130 90.77 1223 reject_low 45 ALIGNMENT 949 YS2-11j08.p1k chr12 1055 26 438489 439521 C 1030 97.96 1222 accept 0 ALIGNMENT 978 YS2-11j08.q1k chr12 40 1183 437199 438346 F 1144 96.07 1195 accept 0 ALIGNMENT 1032 YS2-11j10.p1k chr04 1232 27 724965 726177 C 1206 96.02 1280 accept 0 ALIGNMENT 996 YS2-11j10.q1k chr04 33 1188 724580 725746 F 1156 96.37 1201 accept 0 ALIGNMENT 970 YS2-11j11.q1k chr07 1145 39 667283 668404 C 1107 97.11 1314 accept 0 ALIGNMENT 0 YS2-11j12.q1k chr15 860 859 704062 710027 F 0 0.00 1291 reject_low 19 ALIGNMENT 0 YS2-11j12.q1k chr14 730 871 96609 96608 F 142 0.00 1291 reject_low 18 ALIGNMENT 0 YS2-11j12.q1k chr02 570 62 36219 36218 C 509 0.00 1291 reject_low 6 ALIGNMENT 0 YS2-11j12.q1k chr14 62 570 561608 561607 F 509 0.00 1291 reject_low 10 ALIGNMENT 348 YS2-11j12.q1k chr02 939 571 35851 36218 C 369 99.73 1291 reject_low 6 ALIGNMENT 327 YS2-11j12.q1k chr14 939 571 632124 632491 C 369 97.83 1291 reject_low 14 ALIGNMENT 851 YS2-11j12.q1k chr10 34 939 202782 203686 F 906 99.89 1291 ambiguous_trans 0 ALIGNMENT 330 YS2-11j12.q1k chr02 939 570 643486 643854 C 370 98.11 1291 reject_low 13 ALIGNMENT 0 YS2-11j12.q1k chr16 570 62 443110 443109 C 509 0.00 1291 reject_low 11 ALIGNMENT 336 YS2-11j12.q1k chr14 571 939 561608 561975 F 369 98.64 1291 reject_low 10 ALIGNMENT 333 YS2-11j12.q1k chr07 570 939 110858 111226 F 370 98.38 1291 reject_low 12 ALIGNMENT 0 YS2-11j12.q1k chr04 62 569 437145 437144 F 508 0.00 1291 reject_low 16 ALIGNMENT 0 YS2-11j12.q1k chr13 569 62 808907 808906 C 508 0.00 1291 reject_low 4 ALIGNMENT 0 YS2-11j12.q1k chr13 942 62 290375 290374 C 881 0.00 1291 reject_low 3 ALIGNMENT 0 YS2-11j12.q1k chr15 62 570 703773 703772 F 509 0.00 1291 reject_low 19 ALIGNMENT 0 YS2-11j12.q1k chr13 62 570 503770 503769 F 509 0.00 1291 reject_low 8 ALIGNMENT 0 YS2-11j12.q1k chr02 569 62 643855 643854 C 508 0.00 1291 reject_low 13 ALIGNMENT 348 YS2-11j12.q1k chr09 939 571 196653 197020 C 369 99.73 1291 reject_low 7 ALIGNMENT 350 YS2-11j12.q1k chr10 569 939 197462 197831 F 371 99.73 1291 reject_low 5 ALIGNMENT 348 YS2-11j12.q1k chr13 571 939 503770 504137 F 369 99.73 1291 reject_low 8 ALIGNMENT 0 YS2-11j12.q1k chr07 62 569 110858 110857 F 508 0.00 1291 reject_low 12 ALIGNMENT 320 YS2-11j12.q1k chr13 945 570 808532 808906 C 376 96.81 1291 reject_low 4 ALIGNMENT 0 YS2-11j12.q1k chr09 570 62 197021 197020 C 509 0.00 1291 reject_low 7 ALIGNMENT 324 YS2-11j12.q1k chr05 939 571 354359 354726 C 369 97.56 1291 reject_low 15 ALIGNMENT 307 YS2-11j12.q1k chr04 570 934 437145 437508 F 365 96.16 1291 reject_low 16 ALIGNMENT 839 YS2-11j12.q1k chr16 939 34 436890 437794 C 906 99.45 1291 ambiguous_trans 2 ALIGNMENT 0 YS2-11j12.q1k chr14 570 62 632492 632491 C 509 0.00 1291 reject_low 14 ALIGNMENT 114 YS2-11j12.q1k chr13 1137 943 290167 290374 C 195 89.23 1291 reject_low 3 ALIGNMENT 0 YS2-11j12.q1k chr07 570 62 931544 931543 C 509 0.00 1291 reject_low 17 ALIGNMENT 0 YS2-11j12.q1k chr10 62 568 197462 197461 F 507 0.00 1291 reject_low 5 ALIGNMENT 0 YS2-11j12.q1k chr14 62 569 96450 96449 F 508 0.00 1291 reject_low 18 ALIGNMENT 0 YS2-11j12.q1k chr05 570 62 354727 354726 C 509 0.00 1291 reject_low 15 ALIGNMENT 0 YS2-11j12.q1k chr08 62 570 85535 85534 F 509 0.00 1291 reject_low 9 ALIGNMENT 301 YS2-11j12.q1k chr07 939 571 931177 931543 C 369 95.66 1291 reject_low 17 ALIGNMENT 839 YS2-11j12.q1k chr08 34 939 90850 91754 F 906 99.45 1291 ambiguous_trans 1 ALIGNMENT 265 YS2-11j12.q1k chr15 571 861 703773 704063 F 291 98.28 1291|0,2 reject_low 19 ALIGNMENT 339 YS2-11j12.q1k chr08 571 939 85535 85902 F 369 98.92 1291 reject_low 9 ALIGNMENT 146 YS2-11j12.q1k chr14 570 729 96450 96609 F 160 98.12 1291 reject_low 18 ALIGNMENT 336 YS2-11j12.q1k chr16 939 571 442742 443109 C 369 98.64 1291 reject_low 11 ALIGNMENT 51 YS2-11j12.q1k chr15 857 939 710025 710105 F 83 92.77 1291|3,0 reject_low 19 ALIGNMENT 38 YS2-11j13.q1k vc_7 230 267 13525 13562 F 38 100.00 267 reject_low 7 ALIGNMENT 0 YS2-11j13.p1k chr13 245 228 501367 501366 C 18 0.00 245 accept_chi 1 ALIGNMENT 0 YS2-11j13.q1k vc_7 62 229 13525 13524 F 168 0.00 267 reject_low 7 ALIGNMENT 36 YS2-11j13.q1k vc_5 264 229 1 36 C 36 100.00 267 reject_low 8 ALIGNMENT 0 YS2-11j13.q1k vc_5 228 62 37 36 C 167 0.00 267 reject_low 8 ALIGNMENT 0 YS2-11j13.q1k chr13 227 267 501560 501559 F 41 0.00 267 accept_chi 0 ALIGNMENT 182 YS2-11j13.q1k chr13 32 226 501366 501560 F 195 99.49 267 accept_chi 0 ALIGNMENT 41 YS2-11j13.q1k vc_3 267 227 2472 2512 C 41 100.00 267 reject_low 4 ALIGNMENT 41 YS2-11j13.q1k vc_4 227 267 5831 5871 F 41 100.00 267 reject_low 5 ALIGNMENT 0 YS2-11j13.q1k vc_3 226 62 2513 2512 C 165 0.00 267 reject_low 4 ALIGNMENT 39 YS2-11j13.q1k vc_5 267 229 5025 5063 C 39 100.00 267 reject_low 6 ALIGNMENT 0 YS2-11j13.q1k vc_2 226 62 2146 2145 C 165 0.00 267 reject_low 3 ALIGNMENT 0 YS2-11j13.q1k vc_4 62 226 5831 5830 F 165 0.00 267 reject_low 5 ALIGNMENT 0 YS2-11j13.q1k vc_5 228 62 5064 5063 C 167 0.00 267 reject_low 6 ALIGNMENT 41 YS2-11j13.q1k vc_2 267 227 2105 2145 C 41 100.00 267 reject_low 3 ALIGNMENT 179 YS2-11j13.p1k chr13 227 33 501366 501560 C 195 98.97 245 accept_chi 1 ALIGNMENT 41 YS2-11j13.q1k vc_1 267 227 2472 2512 C 41 100.00 267 reject_low 2 ALIGNMENT 0 YS2-11j13.q1k vc_1 226 62 2513 2512 C 165 0.00 267 reject_low 2 ALIGNMENT 23 YS2-11j15.p1k chr14 740 803 519997 520061 F 64 81.25 1256 reject_low 26 ALIGNMENT 934 YS2-11j15.p1k chr12 27 1209 941297 942485 F 1183 94.25 1256 ambiguous_trans 8 ALIGNMENT 310 YS2-11j15.p1k chr04 27 567 1206802 1207343 F 541 86.69 1256 reject_low 15 ALIGNMENT 976 YS2-11j15.p1k chr04 27 1209 871924 873112 F 1183 95.35 1256 ambiguous_trans 1 ALIGNMENT 913 YS2-11j15.q1k chr07 1169 30 812007 813149 C 1140 95.00 1169 ambiguous_trans 7 ALIGNMENT 0 YS2-11j15.p1k chr04 568 896 1207343 1207342 F 329 0.00 1256 reject_low 15 ALIGNMENT 169 YS2-11j15.p1k chr14 27 242 524838 525054 F 216 94.91 1256 reject_low 20 ALIGNMENT 924 YS2-11j15.p1k chr14 1209 27 566696 567885 C 1183 94.00 1256 reject_low 12 ALIGNMENT 934 YS2-11j15.p1k chr06 27 1209 138016 139204 F 1183 94.25 1256 ambiguous_trans 6 ALIGNMENT 0 YS2-11j15.p1k chr04 896 568 991988 991987 C 329 0.00 1256 reject_low 14 ALIGNMENT 0 YS2-11j15.p1k chr03 242 896 151838 151837 F 655 0.00 1256 reject_low 23 ALIGNMENT 915 YS2-11j15.q1k chr15 1169 30 970837 971979 C 1140 94.91 1169 ambiguous_trans 2 ALIGNMENT 0 YS2-11j15.p1k chr14 243 896 525054 525053 F 654 0.00 1256 reject_low 20 ALIGNMENT 913 YS2-11j15.q1k chr06 1169 30 138463 139605 C 1140 95.00 1169 ambiguous_trans 6 ALIGNMENT 0 YS2-11j15.p1k chr07 896 568 567116 567115 C 329 0.00 1256 reject_low 13 ALIGNMENT 913 YS2-11j15.q1k chr03 1169 30 85365 86507 C 1140 95.00 1169 ambiguous_trans 4 ALIGNMENT 949 YS2-11j15.p1k chr04 1209 27 518347 519535 C 1183 94.67 1256 ambiguous_trans 5 ALIGNMENT 316 YS2-11j15.p1k chr04 567 27 991987 992528 C 541 87.06 1256 reject_low 14 ALIGNMENT 982 YS2-11j15.p1k chr12 1209 27 980400 981588 C 1183 95.52 1256 ambiguous_trans 3 ALIGNMENT 33 YS2-11j15.p1k chr04 240 186 871755 871810 C 55 90.91 1256 reject_low 24 ALIGNMENT 158 YS2-11j15.p1k chr06 27 241 143643 143856 F 215 93.49 1256 reject_low 21 ALIGNMENT 928 YS2-11j15.p1k chr07 1209 27 573408 574596 C 1183 94.08 1256 reject_low 11 ALIGNMENT 907 YS2-11j15.q1k chr12 1169 30 941744 942886 C 1140 94.82 1169 ambiguous_trans 8 ALIGNMENT 930 YS2-11j15.q1k chr15 30 1169 708326 709468 F 1140 95.53 1169 ambiguous_trans 0 ALIGNMENT 0 YS2-11j15.p1k chr06 242 896 143856 143855 F 655 0.00 1256 reject_low 21 ALIGNMENT 0 YS2-11j15.p1k chr04 896 568 883567 883566 C 329 0.00 1256 reject_low 18 ALIGNMENT 0 YS2-11j15.p1k chr06 182 183 137903 143868 F 2 0.00 1256 reject_low 27 ALIGNMENT 68 YS2-11j15.p1k chr03 28 241 151627 151838 F 214 80.84 1256 reject_low 23 ALIGNMENT 940 YS2-11j15.p1k chr03 27 1209 84918 86106 F 1183 94.42 1256 ambiguous_trans 4 ALIGNMENT 0 YS2-11j15.p1k chr14 804 896 520061 520060 F 93 0.00 1256 reject_low 26 ALIGNMENT 952 YS2-11j15.p1k chr04 27 1209 981273 982461 F 1183 94.67 1256 ambiguous_trans 10 ALIGNMENT 925 YS2-11j15.q1k chr04 1169 30 872371 873513 C 1140 95.35 1169 ambiguous_trans 1 ALIGNMENT 307 YS2-11j15.p1k chr04 567 27 883566 884107 C 541 86.51 1256 reject_low 18 ALIGNMENT 914 YS2-11j15.q1k chr02 1126 30 30238 31338 C 1097 95.99 1169 ambiguous_trans 9 ALIGNMENT 0 YS2-11j15.p1k chr12 568 896 651475 651474 F 329 0.00 1256 reject_low 16 ALIGNMENT 934 YS2-11j15.p1k chr07 27 1209 811560 812748 F 1183 94.25 1256 ambiguous_trans 7 ALIGNMENT 69 YS2-11j15.p1k chr03 242 28 124140 124352 C 215 80.93 1256 reject_low 22 ALIGNMENT 319 YS2-11j15.p1k chr07 567 27 567115 567656 C 541 87.25 1256 reject_low 13 ALIGNMENT 0 YS2-11j15.p1k chr06 66 129 137798 137850 F 64 0.00 1256 reject_low 27 ALIGNMENT 0 YS2-11j15.p1k chr14 568 739 519814 519996 F 172 0.00 1256 reject_low 26 ALIGNMENT 33 YS2-11j15.p1k chr06 130 181 137851 137902 F 52 88.46 1256 reject_low 27 ALIGNMENT 0 YS2-11j15.p1k chr04 896 568 650766 650765 C 329 0.00 1256 reject_low 17 ALIGNMENT 27 YS2-11j15.p1k chr06 34 65 137766 137797 F 32 96.88 1256 reject_low 27 ALIGNMENT 0 YS2-11j15.p1k chr03 896 196 142804 142803 C 701 0.00 1256 reject_low 25 ALIGNMENT 0 YS2-11j15.p1k chr06 245 896 143930 143929 F 652 0.00 1256 reject_low 27 ALIGNMENT 174 YS2-11j15.p1k chr03 252 27 168594 168820 C 226 94.69 1256 reject_low 19 ALIGNMENT 0 YS2-11j15.p1k chr04 896 241 871756 871755 C 656 0.00 1256 reject_low 24 ALIGNMENT 958 YS2-11j15.p1k chr02 27 1209 29749 30937 F 1183 94.93 1256 ambiguous_trans 9 ALIGNMENT 310 YS2-11j15.p1k chr12 27 567 650934 651475 F 541 86.69 1256 reject_low 16 ALIGNMENT 0 YS2-11j15.p1k chr04 185 62 871811 871810 C 124 0.00 1256 reject_low 24 ALIGNMENT 999 YS2-11j15.p1k chr15 1209 27 708727 709916 C 1183 96.03 1256 ambiguous_trans 0 ALIGNMENT 295 YS2-11j15.p1k chr14 27 567 519272 519813 F 541 85.95 1256 reject_low 26 ALIGNMENT 917 YS2-11j15.q1k chr12 30 1126 979999 981099 F 1097 96.17 1169 ambiguous_trans 3 ALIGNMENT 22 YS2-11j15.p1k chr03 195 28 142803 142967 C 168 74.40 1256 reject_low 25 ALIGNMENT 0 YS2-11j15.p1k chr03 896 253 168595 168594 C 644 0.00 1256 reject_low 19 ALIGNMENT 0 YS2-11j15.p1k chr03 896 243 124141 124140 C 654 0.00 1256 reject_low 22 ALIGNMENT 903 YS2-11j15.q1k chr04 30 1169 517946 519088 F 1140 94.74 1169 ambiguous_trans 5 ALIGNMENT 307 YS2-11j15.p1k chr04 567 27 650765 651306 C 541 86.51 1256 reject_low 17 ALIGNMENT 970 YS2-11j15.p1k chr15 27 1209 970390 971578 F 1183 95.18 1256 ambiguous_trans 2 ALIGNMENT 896 YS2-11j15.q1k chr07 30 1126 573007 574107 F 1097 95.53 1169 reject_low 11 ALIGNMENT 887 YS2-11j15.q1k chr14 30 1126 566295 567395 F 1097 95.26 1169 reject_low 12 ALIGNMENT 44 YS2-11j15.p1k chr06 184 244 143869 143930 F 61 95.08 1256 reject_low 27 ALIGNMENT 902 YS2-11j15.q1k chr04 1126 30 981762 982862 C 1097 95.62 1169 ambiguous_trans 10 ALIGNMENT 898 YS2-11j16.q1k chr13 40 1161 370854 371971 F 1122 94.39 1179 accept_trans 0 ALIGNMENT 956 YS2-11j16.p1k chr13 1104 22 380749 381842 C 1083 96.86 1233 accept_trans 0 ALIGNMENT 1000 YS2-11j17.q1k chr15 1141 36 526667 527774 C 1106 98.01 1145 accept 0 ALIGNMENT 994 YS2-11j17.p1k chr15 143 1375 525024 526261 F 1233 94.57 1392 accept 0 ALIGNMENT 723 YS2-11j18.p1k chr13 25 777 867963 868716 F 753 99.20 778 accept_chi 1 ALIGNMENT 728 YS2-11j18.q1k chr13 784 31 867963 868716 C 754 99.47 785 accept_chi 0 ALIGNMENT 914 YS2-11j19.q1k chr09 29 1087 234256 235322 F 1059 96.03 1155 accept 0 ALIGNMENT 952 YS2-11j19.p1k chr09 1169 27 237567 238719 C 1143 95.45 1255 accept 0 ALIGNMENT 26 YS2-11j20.q1k chrm 120 158 66998 67035 F 39 94.87 1236 reject_low 5 ALIGNMENT 0 YS2-11j20.p1k chrm 740 310 53226 53225 C 431 0.00 1266 reject_low 1 ALIGNMENT 0 YS2-11j20.q1k chrm 159 646 67035 67034 F 488 0.00 1236 reject_low 5 ALIGNMENT 0 YS2-11j20.q1k chrm 77 118 77059 77058 F 42 0.00 1236 reject_low 3 ALIGNMENT 29 YS2-11j20.p1k chrm 309 266 53225 53267 C 44 93.18 1266 reject_low 1 ALIGNMENT 0 YS2-11j20.q1k chrm 77 181 11038 11037 F 105 0.00 1236 reject_low 7 ALIGNMENT 0 YS2-11j20.q1k chrm 77 119 55424 55423 F 43 0.00 1236 reject_low 11 ALIGNMENT 40 YS2-11j20.q1k chrm 182 238 11038 11096 F 57 91.23 1236 reject_low 7 ALIGNMENT 0 YS2-11j20.q1k chrm 159 646 77098 77097 F 488 0.00 1236 reject_low 3 ALIGNMENT 0 YS2-11j20.q1k chrm 119 77 65105 65104 C 43 0.00 1236 reject_low 2 ALIGNMENT 0 YS2-11j20.q1k chrm 77 180 34925 34924 F 104 0.00 1236 reject_low 8 ALIGNMENT 0 YS2-11j20.q1k chrm 77 119 66998 66997 F 43 0.00 1236 reject_low 5 ALIGNMENT 0 YS2-11j20.q1k chrm 159 162 55463 64488 F 4 0.00 1236 reject_low 11 ALIGNMENT 0 YS2-11j20.p1k chrm 911 911 67002 67036 F 1 0.00 1266 accept 0 ALIGNMENT 33 YS2-11j20.q1k chrm 180 231 66818 66868 F 52 90.38 1236 reject_low 9 ALIGNMENT 37 YS2-11j20.q1k chrm 181 231 34925 34976 F 51 92.16 1236 reject_low 8 ALIGNMENT 0 YS2-11j20.q1k chrm 239 646 11096 11095 F 408 0.00 1236 reject_low 7 ALIGNMENT 419 YS2-11j20.p1k chrm 25 910 66151 67001 F 886 90.86 1266 accept 0 ALIGNMENT 0 YS2-11j20.q1k chrm 77 181 52764 52763 F 105 0.00 1236 reject_low 10 ALIGNMENT 0 YS2-11j20.q1k chrm 646 249 9474 9473 C 398 0.00 1236 reject_low 4 ALIGNMENT 0 YS2-11j20.q1k chrm 646 159 65068 65067 C 488 0.00 1236 reject_low 2 ALIGNMENT 33 YS2-11j20.q1k chrm 119 158 77059 77098 F 40 97.50 1236 reject_low 3 ALIGNMENT 0 YS2-11j20.q1k chrm 233 646 52814 52813 F 414 0.00 1236 reject_low 10 ALIGNMENT 0 YS2-11j20.q1k chrm 232 646 34976 34975 F 415 0.00 1236 reject_low 8 ALIGNMENT 0 YS2-11j20.p1k chrm 265 92 53268 53267 C 174 0.00 1266 reject_low 1 ALIGNMENT 33 YS2-11j20.p1k chrm 912 1042 67037 67165 F 131 80.15 1266 accept 0 ALIGNMENT 47 YS2-11j20.q1k chrm 163 240 64489 64567 F 78 88.46 1236 reject_low 11 ALIGNMENT 22 YS2-11j20.p1k chrm 692 736 53285 53329 F 45 97.78 1266 reject_low 2 ALIGNMENT 0 YS2-11j20.p1k chrm 92 691 53285 53284 F 600 0.00 1266 reject_low 2 ALIGNMENT 26 YS2-11j20.q1k chrm 158 120 65067 65104 C 39 94.87 1236 reject_low 2 ALIGNMENT 0 YS2-11j20.q1k chrm 77 169 48081 48080 F 93 0.00 1236 reject_low 1 ALIGNMENT 0 YS2-11j20.q1k chrm 233 646 34329 34328 F 414 0.00 1236 reject_low 6 ALIGNMENT 43 YS2-11j20.q1k chrm 170 237 48081 48149 F 68 88.24 1236 reject_low 1 ALIGNMENT 31 YS2-11j20.q1k chrm 120 158 55424 55462 F 39 97.44 1236 reject_low 11 ALIGNMENT 0 YS2-11j20.q1k chrm 77 164 34263 34262 F 88 0.00 1236 reject_low 6 ALIGNMENT 517 YS2-11j20.q1k chrm 975 23 67206 68153 C 953 92.55 1236 accept 0 ALIGNMENT 32 YS2-11j20.q1k chrm 182 232 52764 52814 F 51 88.24 1236 reject_low 10 ALIGNMENT 0 YS2-11j20.q1k chrm 241 646 64567 64566 F 406 0.00 1236 reject_low 11 ALIGNMENT 37 YS2-11j20.q1k chrm 165 232 34263 34329 F 68 86.76 1236 reject_low 6 ALIGNMENT 0 YS2-11j20.q1k chrm 238 646 48149 48148 F 409 0.00 1236 reject_low 1 ALIGNMENT 0 YS2-11j20.q1k chrm 77 179 66818 66817 F 103 0.00 1236 reject_low 9 ALIGNMENT 39 YS2-11j20.q1k chrm 248 182 9473 9540 C 67 88.06 1236 reject_low 4 ALIGNMENT 0 YS2-11j20.q1k chrm 232 646 66868 66867 F 415 0.00 1236 reject_low 9 ALIGNMENT 0 YS2-11j20.q1k chrm 181 77 9541 9540 C 105 0.00 1236 reject_low 4 ALIGNMENT 986 YS2-11j22.p1k chr10 1230 67 242821 243992 C 1164 96.13 1239 accept 0 ALIGNMENT 944 YS2-11j22.q1k chr10 28 1133 239489 240595 F 1106 96.11 1135 accept 0 ALIGNMENT 940 YS2-11j23.q1k chr15 33 1067 910800 911833 F 1035 98.16 1069 accept 0 ALIGNMENT 1016 YS2-11j23.p1k chr15 1169 25 911496 912646 C 1145 97.38 1172 accept 0 ALIGNMENT 42 YS2-11j24.q1k vc_4 580 622 5829 5871 F 43 100.00 622 reject_low 4 ALIGNMENT 0 YS2-11j24.q1k vc_1 579 62 2515 2514 C 518 0.00 622 reject_low 2 ALIGNMENT 0 YS2-11j24.q1k chr02 582 622 585641 585640 F 41 0.00 622 accept_chi 1 ALIGNMENT 42 YS2-11j24.q1k vc_1 622 580 2472 2514 C 43 100.00 622 reject_low 2 ALIGNMENT 0 YS2-11j24.q1k vc_4 62 579 5829 5828 F 518 0.00 622 reject_low 4 ALIGNMENT 0 YS2-11j24.q1k vc_5 583 62 5064 5063 C 522 0.00 622 reject_low 5 ALIGNMENT 0 YS2-11j24.q1k vc_3 579 62 2515 2514 C 518 0.00 622 reject_low 3 ALIGNMENT 39 YS2-11j24.q1k vc_5 622 584 5025 5063 C 39 100.00 622 reject_low 5 ALIGNMENT 540 YS2-11j24.p1k chr02 576 33 585098 585641 C 544 100.00 595 accept_chi 0 ALIGNMENT 0 YS2-11j24.q1k vc_7 62 584 13525 13524 F 523 0.00 622 reject_low 6 ALIGNMENT 36 YS2-11j24.q1k vc_5 619 584 1 36 C 36 100.00 622 reject_low 7 ALIGNMENT 38 YS2-11j24.q1k vc_7 585 622 13525 13562 F 38 100.00 622 reject_low 6 ALIGNMENT 535 YS2-11j24.q1k chr02 39 581 585098 585641 F 543 99.82 622 accept_chi 1 ALIGNMENT 42 YS2-11j24.q1k vc_3 622 580 2472 2514 C 43 100.00 622 reject_low 3 ALIGNMENT 0 YS2-11j24.q1k vc_5 583 62 37 36 C 522 0.00 622 reject_low 7 ALIGNMENT 0 YS2-11j24.p1k chr02 595 577 585099 585098 C 19 0.00 595 accept_chi 0 ALIGNMENT 536 YS2-11k02.q1k chr05 7 747 92469 93201 F 741 91.77 1120 accept 0 ALIGNMENT 907 YS2-11k02.p1k chr05 1113 27 93920 94995 C 1087 96.50 1222 accept 0 ALIGNMENT 974 YS2-11k03.q1k chr04 36 1136 1204623 1205718 F 1101 97.82 1136 accept_trans 0 ALIGNMENT 371 YS2-11k03.p1k chr04 431 40 1212612 1213003 C 392 99.74 1174|3,0 accept_trans 0 ALIGNMENT 585 YS2-11k03.p1k chr04 1142 426 1205969 1206694 C 717 95.12 1174|0,3 accept_trans 0 ALIGNMENT 0 YS2-11k03.p1k chr04 428 429 1206692 1212614 C 0 0.00 1174 accept_trans 0 ALIGNMENT 907 YS2-11k04.q1k chr16 37 1140 706423 707537 F 1104 94.93 1163 accept 0 ALIGNMENT 943 YS2-11k05.p1k chr12 1189 38 128955 130113 C 1152 94.97 1197 accept 0 ALIGNMENT 844 YS2-11k05.q1k chr12 29 1047 128578 129588 F 1019 95.88 1185 accept 0 ALIGNMENT 986 YS2-11k08.q1k chr08 1194 39 148793 149952 C 1156 95.76 1198 accept 0 ALIGNMENT 459 YS2-11k08.p1k chr08 72 709 144701 145332 F 638 91.38 992 accept 0 ALIGNMENT 310 YS2-11k09.q1k chr03 486 36 688 1138 C 451 92.02 1166 reject_low 20 ALIGNMENT 0 YS2-11k09.q1k chr08 607 633 557371 557370 F 27 0.00 1166 reject_low 18 ALIGNMENT 917 YS2-11k09.p1k chr13 39 1058 2415 3433 F 1020 96.96 1223 ambiguous_tel 0 ALIGNMENT 0 YS2-11k09.q1k chr10 516 493 6695 7346 C 24 0.00 1166 ambiguous_tel 8 ALIGNMENT 283 YS2-11k09.q1k chr12 36 497 1064237 1064705 F 462 89.83 1166 ambiguous_tel 3 reject_low 14 ALIGNMENT 0 YS2-11k09.q1k chr02 519 828 812815 812814 F 310 0.00 1166 reject_low 19 ALIGNMENT 496 YS2-11k09.q1k chr12 1166 517 4706 5366 C 650 93.85 1166 ambiguous_tel 1 ALIGNMENT 920 YS2-11k09.p1k chr16 1058 39 944620 945638 C 1020 97.06 1223 ambiguous_tel 6 ALIGNMENT 468 YS2-11k09.q1k chr09 1166 517 6045 6711 C 650 92.15 1166 ambiguous_tel 9 ALIGNMENT 0 YS2-11k09.q1k chr15 461 516 1084302 1084909 F 56 0.00 1166 ambiguous_tel 5 ALIGNMENT 0 YS2-11k09.q1k chr08 518 517 556548 557281 F 0 0.00 1166 reject_low 18 ALIGNMENT 0 YS2-11k09.q1k chr12 607 633 1065530 1065529 F 27 0.00 1166 reject_low 14 ALIGNMENT 0 YS2-11k09.q1k chr16 62 112 942428 942427 F 51 0.00 1166 ambiguous_tel 6 ALIGNMENT 263 YS2-11k09.q1k chr10 492 36 7347 7808 C 457 88.84 1166 ambiguous_tel 8 ALIGNMENT 496 YS2-11k09.q1k chr12 1166 517 10241 10901 C 650 93.85 1166 ambiguous_tel 2 ALIGNMENT 468 YS2-11k09.q1k chr10 1166 517 6028 6694 C 650 92.15 1166 ambiguous_tel 8 ALIGNMENT 489 YS2-11k09.q1k chr12 517 1166 1071946 1072607 F 650 93.54 1166 ambiguous_tel 3 ALIGNMENT 917 YS2-11k09.p1k chr07 1058 39 1087628 1088646 C 1020 96.96 1223 reject_low 11 ALIGNMENT 929 YS2-11k09.p1k chr06 39 1058 1576 2594 F 1020 97.35 1223 reject_low 12 ALIGNMENT 465 YS2-11k09.q1k chr07 517 1166 1084646 1085312 F 650 92.00 1166 reject_low 11 ALIGNMENT 465 YS2-11k09.q1k chr14 1166 517 5656 6322 C 650 92.00 1166 ambiguous_tel 10 ALIGNMENT 914 YS2-11k09.p1k chr05 39 1058 2386 3404 F 1020 96.86 1223 reject_low 16 ALIGNMENT 238 YS2-11k09.q1k chr07 38 492 1083603 1084056 F 455 87.03 1166 reject_low 11 ALIGNMENT 496 YS2-11k09.q1k chr13 1166 517 4582 5242 C 650 93.85 1166|0,1 ambiguous_tel 0 ALIGNMENT 263 YS2-11k09.q1k chr09 492 36 7364 7825 C 457 88.84 1166 ambiguous_tel 9 ALIGNMENT 220 YS2-11k09.q1k chr08 113 518 556141 556548 F 406 87.93 1166|0,1 reject_low 18 ALIGNMENT 917 YS2-11k09.p1k chr15 1058 39 1087887 1088905 C 1020 96.96 1223 ambiguous_tel 5 ALIGNMENT 0 YS2-11k09.q1k chr02 633 607 5462 5461 C 27 0.00 1166 reject_low 17 ALIGNMENT 279 YS2-11k09.q1k chr04 36 492 1524567 1525030 F 457 89.72 1166 ambiguous_tel 4 ALIGNMENT 311 YS2-11k09.q1k chr13 518 38 5902 6382 C 481 91.06 1166|1,0 ambiguous_tel 0 ALIGNMENT 347 YS2-11k09.q1k chr08 634 1166 557371 557924 F 533 90.43 1166 reject_low 18 ALIGNMENT 0 YS2-11k09.q1k chr03 828 487 689 688 C 342 0.00 1166 reject_low 20 ALIGNMENT 311 YS2-11k09.q1k chr02 38 518 812335 812815 F 481 90.85 1166 reject_low 19 ALIGNMENT 917 YS2-11k09.p1k chr09 39 1058 2710 3728 F 1020 96.96 1223 ambiguous_tel 9 ALIGNMENT 0 YS2-11k09.q1k chr12 516 487 10902 11673 C 30 0.00 1166 ambiguous_tel 2 ALIGNMENT 78 YS2-11k09.q1k chr12 517 606 1065440 1065529 F 90 96.67 1166 reject_low 14 ALIGNMENT 343 YS2-11k09.q1k chr02 1166 634 4907 5461 C 533 90.24 1166 reject_low 17 ALIGNMENT 920 YS2-11k09.p1k chr10 39 1058 2693 3711 F 1020 97.06 1223 ambiguous_tel 8 ALIGNMENT 283 YS2-11k09.q1k chr16 460 36 6840 7264 C 425 91.29 1166 ambiguous_tel 7 ALIGNMENT 913 YS2-11k09.p1k chr08 1058 39 559073 560092 C 1020 96.86 1223 reject_low 18 ALIGNMENT 277 YS2-11k09.q1k chr12 634 1166 1065530 1066055 F 533 87.43 1166 reject_low 14 ALIGNMENT 0 YS2-11k09.q1k chr06 516 476 4390 5127 C 41 0.00 1166 reject_low 12 ALIGNMENT 382 YS2-11k09.q1k chr06 1166 517 3744 4389 C 650 88.92 1166 reject_low 12 ALIGNMENT 52 YS2-11k09.q1k chr16 113 198 942428 942513 F 86 93.02 1166 ambiguous_tel 6 ALIGNMENT 0 YS2-11k09.q1k chr04 493 516 1525031 1525744 F 24 0.00 1166 ambiguous_tel 4 ALIGNMENT 917 YS2-11k09.p1k chr12 1058 39 1074923 1075941 C 1020 96.96 1223 ambiguous_tel 3 ALIGNMENT 301 YS2-11k09.q1k chr12 486 36 11674 12126 C 451 91.13 1166 ambiguous_tel 1,2 ALIGNMENT 913 YS2-11k09.p1k chr02 39 1058 2739 3758 F 1020 96.86 1223 reject_low 17 ALIGNMENT 271 YS2-11k09.q1k chr05 1166 517 5611 6226 C 650 84.92 1166 reject_low 16 ALIGNMENT 920 YS2-11k09.p1k chr12 39 1058 8074 9092 F 1020 97.06 1223 ambiguous_tel 2 ALIGNMENT 271 YS2-11k09.q1k chr05 36 492 569554 570013 F 457 89.06 1166 reject_low 13 ALIGNMENT 0 YS2-11k09.q1k chr12 516 487 5367 11673 C 30 0.00 1166 ambiguous_tel 1 ALIGNMENT 917 YS2-11k09.p1k chr12 1058 39 1068260 1069278 C 1020 96.96 1223 reject_low 14 ALIGNMENT 917 YS2-11k09.p1k chr05 1058 39 573551 574569 C 1020 96.96 1223 reject_low 13 ALIGNMENT 465 YS2-11k09.q1k chr16 1166 517 5565 6231 C 650 92.00 1166 ambiguous_tel 7 ALIGNMENT 0 YS2-11k09.q1k chr02 516 498 5552 6177 C 19 0.00 1166 reject_low 17 ALIGNMENT 920 YS2-11k09.p1k chr12 39 1058 2539 3557 F 1020 97.06 1223 ambiguous_tel 1 ALIGNMENT 917 YS2-11k09.p1k chr04 1058 39 1528722 1529740 C 1020 96.96 1223 ambiguous_tel 4 ALIGNMENT 250 YS2-11k09.q1k chr14 486 38 7012 7466 C 449 88.20 1166 ambiguous_tel 10 ALIGNMENT 78 YS2-11k09.q1k chr08 517 606 557281 557370 F 90 96.67 1166|1,0 reject_low 18 ALIGNMENT 0 YS2-11k09.q1k chr09 516 493 6712 7363 C 24 0.00 1166 ambiguous_tel 9 ALIGNMENT 489 YS2-11k09.q1k chr15 517 1166 1084910 1085571 F 650 93.54 1166 ambiguous_tel 5 ALIGNMENT 0 YS2-11k09.q1k chr05 516 62 6227 6226 C 455 0.00 1166 reject_low 16 ALIGNMENT 434 YS2-11k09.q1k chr08 1166 38 4438 5542 C 1129 83.44 1166 reject_low 15 ALIGNMENT 277 YS2-11k09.q1k chr02 497 36 6178 6648 C 462 89.39 1166 reject_low 17 ALIGNMENT 917 YS2-11k09.p1k chr16 39 1058 2231 3249 F 1020 96.96 1223 ambiguous_tel 7 ALIGNMENT 668 YS2-11k09.q1k chr16 225 1166 942511 943470 F 942 91.61 1166 ambiguous_tel 6 ALIGNMENT 0 YS2-11k09.q1k chr16 516 461 6232 6839 C 56 0.00 1166 ambiguous_tel 7 ALIGNMENT 489 YS2-11k09.q1k chr04 517 1166 1525745 1526406 F 650 93.54 1166 ambiguous_tel 4 ALIGNMENT 0 YS2-11k09.q1k chr12 498 516 1064706 1065439 F 19 0.00 1166 reject_low 14 ALIGNMENT 0 YS2-11k09.q1k chr08 62 112 556141 556140 F 51 0.00 1166 reject_low 18 ALIGNMENT 0 YS2-11k09.q1k chr05 493 516 570014 570609 F 24 0.00 1166 reject_low 13 ALIGNMENT 0 YS2-11k09.q1k chr13 517 518 5242 5902 C 0 0.00 1166 ambiguous_tel 0 ALIGNMENT 883 YS2-11k09.p1k chr08 39 1058 2266 3289 F 1020 95.88 1223 reject_low 15 ALIGNMENT 0 YS2-11k09.q1k chr16 199 224 942514 942510 F 26 0.00 1166 ambiguous_tel 6 ALIGNMENT 78 YS2-11k09.q1k chr02 606 517 5462 5551 C 90 96.67 1166 reject_low 17 ALIGNMENT 0 YS2-11k09.q1k chr14 516 487 6323 7011 C 30 0.00 1166 ambiguous_tel 10 ALIGNMENT 917 YS2-11k09.p1k chr14 39 1058 2322 3340 F 1020 96.96 1223 ambiguous_tel 10 ALIGNMENT 380 YS2-11k09.q1k chr05 517 1166 570610 571252 F 650 89.08 1166 reject_low 13 ALIGNMENT 0 YS2-11k09.q1k chr07 493 516 1084057 1084645 F 24 0.00 1166 reject_low 11 ALIGNMENT 280 YS2-11k09.q1k chr15 36 460 1083877 1084301 F 425 91.06 1166 ambiguous_tel 5 ALIGNMENT 246 YS2-11k09.q1k chr06 475 38 5128 5568 C 438 88.36 1166 reject_low 12 ALIGNMENT 0 YS2-11k09.q1k chr12 498 516 1064706 1071945 F 19 0.00 1166 ambiguous_tel 3 ALIGNMENT 20 YS2-11k10.p1k chrm 190 222 63521 63553 F 33 93.94 232 reject_low 1 ALIGNMENT 105 YS2-11k10.p1k chrm 64 226 8696 8858 F 163 98.16 232 accept 0 ALIGNMENT 0 YS2-11k10.p1k chrm 92 189 63521 63520 F 98 0.00 232 reject_low 1 ALIGNMENT 0 YS2-11k12.q1k chr07 199 238 511787 511786 F 40 0.00 238 accept_chi 0 ALIGNMENT 158 YS2-11k12.p1k chr07 196 30 511618 511784 C 167 99.40 214 accept_chi 1 ALIGNMENT 0 YS2-11k12.q1k vc_3 198 62 2512 2511 C 137 0.00 238 reject_low 3 ALIGNMENT 36 YS2-11k12.q1k vc_5 235 200 1 36 C 36 100.00 238 reject_low 7 ALIGNMENT 40 YS2-11k12.q1k vc_4 199 238 5832 5871 F 40 100.00 238 reject_low 4 ALIGNMENT 38 YS2-11k12.q1k vc_7 201 238 13525 13562 F 38 100.00 238 reject_low 6 ALIGNMENT 0 YS2-11k12.q1k vc_1 198 62 2512 2511 C 137 0.00 238 reject_low 2 ALIGNMENT 0 YS2-11k12.q1k vc_4 62 198 5832 5831 F 137 0.00 238 reject_low 4 ALIGNMENT 0 YS2-11k12.q1k vc_5 199 62 5064 5063 C 138 0.00 238 reject_low 5 ALIGNMENT 0 YS2-11k12.q1k vc_7 62 200 13525 13524 F 139 0.00 238 reject_low 6 ALIGNMENT 40 YS2-11k12.q1k vc_3 238 199 2472 2511 C 40 100.00 238 reject_low 3 ALIGNMENT 164 YS2-11k12.q1k chr07 29 198 511618 511787 F 170 100.00 238 accept_chi 0 ALIGNMENT 0 YS2-11k12.q1k vc_5 199 62 37 36 C 138 0.00 238 reject_low 7 ALIGNMENT 40 YS2-11k12.q1k vc_1 238 199 2472 2511 C 40 100.00 238 reject_low 2 ALIGNMENT 0 YS2-11k12.p1k chr07 214 197 511619 511618 C 18 0.00 214 accept_chi 1 ALIGNMENT 39 YS2-11k12.q1k vc_5 238 200 5025 5063 C 39 100.00 238 reject_low 5 ALIGNMENT 941 YS2-11k13.p1k chr12 25 1093 34744 35828 F 1069 96.91 1393 accept 0 ALIGNMENT 914 YS2-11k13.q1k chr12 1037 45 38593 39584 C 993 98.29 1039 accept 0 ALIGNMENT 41 YS2-11k14.q1k vc_2 568 528 2105 2145 C 41 100.00 568 reject_low 3 ALIGNMENT 0 YS2-11k14.q1k vc_1 527 62 2513 2512 C 466 0.00 568 reject_low 2 ALIGNMENT 0 YS2-11k14.q1k vc_5 529 62 5064 5063 C 468 0.00 568 reject_low 6 ALIGNMENT 0 YS2-11k14.q1k vc_3 527 62 2513 2512 C 466 0.00 568 reject_low 4 ALIGNMENT 0 YS2-11k14.q1k chr04 568 530 1167403 1167402 C 39 0.00 568 accept_chi 0 ALIGNMENT 0 YS2-11k14.q1k vc_5 529 62 37 36 C 468 0.00 568 reject_low 8 ALIGNMENT 490 YS2-11k14.q1k chr04 529 26 1167402 1167905 C 504 100.00 568 accept_chi 0 ALIGNMENT 480 YS2-11k14.p1k chr04 22 523 1167402 1167905 F 502 99.60 542 accept_chi 1 ALIGNMENT 0 YS2-11k14.q1k vc_2 527 62 2146 2145 C 466 0.00 568 reject_low 3 ALIGNMENT 0 YS2-11k14.p1k chr04 524 542 1167905 1167904 F 19 0.00 542 accept_chi 1 ALIGNMENT 41 YS2-11k14.q1k vc_3 568 528 2472 2512 C 41 100.00 568 reject_low 4 ALIGNMENT 36 YS2-11k14.q1k vc_5 565 530 1 36 C 36 100.00 568 reject_low 8 ALIGNMENT 41 YS2-11k14.q1k vc_1 568 528 2472 2512 C 41 100.00 568 reject_low 2 ALIGNMENT 0 YS2-11k14.q1k vc_7 62 530 13525 13524 F 469 0.00 568 reject_low 7 ALIGNMENT 0 YS2-11k14.q1k vc_4 62 527 5831 5830 F 466 0.00 568 reject_low 5 ALIGNMENT 39 YS2-11k14.q1k vc_5 568 530 5025 5063 C 39 100.00 568 reject_low 6 ALIGNMENT 38 YS2-11k14.q1k vc_7 531 568 13525 13562 F 38 100.00 568 reject_low 7 ALIGNMENT 41 YS2-11k14.q1k vc_4 528 568 5831 5871 F 41 100.00 568 reject_low 5 ALIGNMENT 958 YS2-11k15.p1k chr11 55 1166 128432 129552 F 1112 96.49 1217 accept 0 ALIGNMENT 966 YS2-11k15.q1k chr11 1103 27 133078 134160 C 1077 97.31 1103 accept 0 ALIGNMENT 41 YS2-11k16.q1k vc_1 454 414 2472 2512 C 41 100.00 454 reject_low 2 ALIGNMENT 41 YS2-11k16.q1k vc_3 454 414 2472 2512 C 41 100.00 454 reject_low 4 ALIGNMENT 0 YS2-11k16.q1k vc_3 413 62 2513 2512 C 352 0.00 454 reject_low 4 ALIGNMENT 0 YS2-11k16.q1k vc_4 62 413 5831 5830 F 352 0.00 454 reject_low 5 ALIGNMENT 354 YS2-11k16.q1k chr14 34 413 707280 707659 F 380 98.68 454 accept_chi 1 ALIGNMENT 0 YS2-11k16.q1k vc_5 415 62 5064 5063 C 354 0.00 454 reject_low 6 ALIGNMENT 39 YS2-11k16.q1k vc_5 454 416 5025 5063 C 39 100.00 454 reject_low 6 ALIGNMENT 0 YS2-11k16.p1k chr14 428 411 707281 707280 C 18 0.00 428 accept_chi 0 ALIGNMENT 0 YS2-11k16.q1k vc_7 62 416 13525 13524 F 355 0.00 454 reject_low 7 ALIGNMENT 0 YS2-11k16.q1k vc_1 413 62 2513 2512 C 352 0.00 454 reject_low 2 ALIGNMENT 41 YS2-11k16.q1k vc_2 454 414 2105 2145 C 41 100.00 454 reject_low 3 ALIGNMENT 0 YS2-11k16.q1k chr14 414 454 707659 707658 F 41 0.00 454 accept_chi 1 ALIGNMENT 0 YS2-11k16.q1k vc_2 413 62 2146 2145 C 352 0.00 454 reject_low 3 ALIGNMENT 354 YS2-11k16.p1k chr14 410 31 707280 707659 C 380 98.68 428 accept_chi 0 ALIGNMENT 36 YS2-11k16.q1k vc_5 451 416 1 36 C 36 100.00 454 reject_low 8 ALIGNMENT 41 YS2-11k16.q1k vc_4 414 454 5831 5871 F 41 100.00 454 reject_low 5 ALIGNMENT 38 YS2-11k16.q1k vc_7 417 454 13525 13562 F 38 100.00 454 reject_low 7 ALIGNMENT 0 YS2-11k16.q1k vc_5 415 62 37 36 C 354 0.00 454 reject_low 8 ALIGNMENT 896 YS2-11k17.p1k chr07 25 1110 718359 719459 F 1086 95.21 1196 accept 0 ALIGNMENT 936 YS2-11k17.q1k chr07 1123 32 720425 721511 C 1092 97.16 1123 accept 0 ALIGNMENT 939 YS2-11k18.q1k chr16 33 1137 430801 431889 F 1105 96.65 1183 accept 0 ALIGNMENT 991 YS2-11k18.p1k chr16 1243 25 430845 432067 C 1219 94.59 1264 accept 0 ALIGNMENT 974 YS2-11k22.q1k chr05 36 1106 238578 239645 F 1071 98.51 1112 accept 0 ALIGNMENT 0 YS2-11k23.q1k vc_5 169 62 37 36 C 108 0.00 208 reject_low 7 ALIGNMENT 36 YS2-11k23.q1k vc_5 205 170 1 36 C 36 100.00 208 reject_low 7 ALIGNMENT 0 YS2-11k23.q1k vc_4 62 167 5831 5830 F 106 0.00 208 reject_low 4 ALIGNMENT 0 YS2-11k23.q1k vc_1 167 62 2513 2512 C 106 0.00 208 reject_low 2 ALIGNMENT 0 YS2-11k23.q1k vc_7 62 170 13525 13524 F 109 0.00 208 reject_low 6 ALIGNMENT 41 YS2-11k23.q1k vc_4 168 208 5831 5871 F 41 100.00 208 reject_low 4 ALIGNMENT 0 YS2-11k23.q1k chr05 169 208 308804 308803 F 40 0.00 208 accept_chi 1 ALIGNMENT 0 YS2-11k23.q1k vc_3 167 62 2513 2512 C 106 0.00 208 reject_low 3 ALIGNMENT 41 YS2-11k23.q1k vc_1 208 168 2472 2512 C 41 100.00 208 reject_low 2 ALIGNMENT 127 YS2-11k23.q1k chr05 27 168 308663 308804 F 142 97.89 208 accept_chi 1 ALIGNMENT 138 YS2-11k23.p1k chr05 198 57 308663 308804 C 142 100.00 216 accept_chi 0 ALIGNMENT 0 YS2-11k23.q1k vc_5 169 62 5064 5063 C 108 0.00 208 reject_low 5 ALIGNMENT 0 YS2-11k23.p1k chr05 216 199 308664 308663 C 18 0.00 216 accept_chi 0 ALIGNMENT 41 YS2-11k23.q1k vc_3 208 168 2472 2512 C 41 100.00 208 reject_low 3 ALIGNMENT 39 YS2-11k23.q1k vc_5 208 170 5025 5063 C 39 100.00 208 reject_low 5 ALIGNMENT 38 YS2-11k23.q1k vc_7 171 208 13525 13562 F 38 100.00 208 reject_low 6 ALIGNMENT 1014 YS2-11k24.p1k chr07 1183 34 359345 360494 C 1150 96.96 1185 accept 0 ALIGNMENT 876 YS2-11k24.q1k chr07 33 1009 354491 355463 F 977 97.54 1155 accept 0 ALIGNMENT 978 YS2-11l02.q1k chr15 37 1134 378016 379117 F 1098 96.99 1137 accept 0 ALIGNMENT 361 YS2-11l02.p1k chr15 655 151 382031 382542 C 505 90.30 1121 accept 0 ALIGNMENT 0 YS2-11l04.p1k chr10 615 265 499240 499239 C 351 0.00 1208 reject_low 1 ALIGNMENT 202 YS2-11l04.p1k chr10 264 26 499239 499475 C 239 95.82 1208 reject_low 1 ALIGNMENT 697 YS2-11l04.q1k chr15 1002 36 529256 530222 C 967 91.52 1171 accept 0 ALIGNMENT 535 YS2-11l04.p1k chr15 269 1092 526563 527389 F 824 89.20 1208 accept 0 ALIGNMENT 429 YS2-11l05.p1k chr08 234 1042 90339 91142 F 809 86.16 1392 ambiguous_trans 2 ALIGNMENT 429 YS2-11l05.p1k chr16 1042 234 437502 438305 C 809 86.16 1392 ambiguous_trans 3 ALIGNMENT 438 YS2-11l05.p1k chr10 234 1042 202271 203074 F 809 86.53 1392 ambiguous_trans 1 ALIGNMENT 422 YS2-11l05.q1k chr06 128 868 195452 196187 F 741 86.37 1436 accept 0 ALIGNMENT 1032 YS2-11l06.q1k chr04 38 1185 206136 207288 F 1148 96.95 1185 accept 0 ALIGNMENT 980 YS2-11l06.p1k chr04 1160 35 207354 208494 C 1126 96.00 1248 accept 0 ALIGNMENT 893 YS2-11l07.p1k chr08 30 1155 90198 91331 F 1126 94.40 1271 ambiguous_trans 3 ALIGNMENT 1030 YS2-11l07.q1k chr13 39 1189 286948 288111 F 1151 97.65 1192 accept 0 ALIGNMENT 894 YS2-11l07.p1k chr16 1155 30 437313 438446 C 1126 94.49 1271 ambiguous_trans 2 ALIGNMENT 905 YS2-11l07.p1k chr10 30 1155 202130 203263 F 1126 94.76 1271 ambiguous_trans 1 ALIGNMENT 925 YS2-11l08.q1k chr09 1157 39 259490 260609 C 1119 95.71 1188 accept 0 ALIGNMENT 985 YS2-11l10.q1k chr15 1175 36 178591 179732 C 1140 97.02 1205 accept 0 ALIGNMENT 983 YS2-11l10.p1k chr15 29 1199 175591 176781 F 1171 95.39 1236 accept 0 ALIGNMENT 0 YS2-11l11.q1k vc_5 271 62 5064 5063 C 210 0.00 310 reject_low 6 ALIGNMENT 39 YS2-11l11.q1k vc_5 310 272 5025 5063 C 39 100.00 310 reject_low 6 ALIGNMENT 41 YS2-11l11.q1k vc_2 310 270 2105 2145 C 41 100.00 310 reject_low 3 ALIGNMENT 0 YS2-11l11.q1k vc_1 269 62 2513 2512 C 208 0.00 310 reject_low 2 ALIGNMENT 0 YS2-11l11.q1k vc_5 271 62 37 36 C 210 0.00 310 reject_low 8 ALIGNMENT 36 YS2-11l11.q1k vc_5 307 272 1 36 C 36 100.00 310 reject_low 8 ALIGNMENT 0 YS2-11l11.q1k vc_3 269 62 2513 2512 C 208 0.00 310 reject_low 4 ALIGNMENT 0 YS2-11l11.p1k chr04 319 301 103351 103350 C 19 0.00 319 accept_chi 1 ALIGNMENT 0 YS2-11l11.q1k vc_4 62 269 5831 5830 F 208 0.00 310 reject_low 5 ALIGNMENT 0 YS2-11l11.q1k vc_7 62 272 13525 13524 F 211 0.00 310 reject_low 7 ALIGNMENT 41 YS2-11l11.q1k vc_1 310 270 2472 2512 C 41 100.00 310 reject_low 2 ALIGNMENT 38 YS2-11l11.q1k vc_7 273 310 13525 13562 F 38 100.00 310 reject_low 7 ALIGNMENT 206 YS2-11l11.q1k chr04 31 269 103350 103589 F 239 97.07 310 accept_chi 0 ALIGNMENT 41 YS2-11l11.q1k vc_4 270 310 5831 5871 F 41 100.00 310 reject_low 5 ALIGNMENT 0 YS2-11l11.q1k vc_2 269 62 2146 2145 C 208 0.00 310 reject_low 3 ALIGNMENT 41 YS2-11l11.q1k vc_3 310 270 2472 2512 C 41 100.00 310 reject_low 4 ALIGNMENT 198 YS2-11l11.p1k chr04 300 60 103350 103589 C 241 95.85 319 accept_chi 1 ALIGNMENT 0 YS2-11l11.q1k chr04 270 310 103589 103588 F 41 0.00 310 accept_chi 0 ALIGNMENT 942 YS2-11l13.q1k chr15 1028 22 1054005 1055012 C 1007 99.01 1030 accept 0 ALIGNMENT 864 YS2-11l13.p1k chr15 27 1046 1050912 1051946 F 1020 95.49 1254 accept 0 ALIGNMENT 0 YS2-11l14.q1k chr15 62 119 857236 857235 F 58 0.00 446 reject_low 8 ALIGNMENT 86 YS2-11l14.q1k chr15 120 385 857236 857501 F 266 78.57 446 reject_low 8 ALIGNMENT 153 YS2-11l14.p1k vc_3 340 1 1412 1749 C 340 82.94 510 reject_vc 3 ALIGNMENT 0 YS2-11l14.q1k chr15 386 446 857501 857500 F 61 0.00 446 reject_low 8 ALIGNMENT 152 YS2-11l14.p1k vc_7 1 340 13918 14255 F 340 83.53 510 reject_vc 6 ALIGNMENT 153 YS2-11l14.p1k vc_1 340 1 1412 1749 C 340 82.94 510 reject_vc 1 ALIGNMENT 153 YS2-11l14.p1k vc_2 340 1 1412 1749 C 340 82.94 510 reject_vc 2 ALIGNMENT 151 YS2-11l14.p1k vc_6 1 306 3712 4016 F 306 84.31 510 reject_vc 7 ALIGNMENT 153 YS2-11l14.p1k vc_5 340 1 4332 4669 C 340 82.94 510 reject_vc 4 ALIGNMENT 152 YS2-11l14.p1k vc_7 1 340 456 793 F 340 83.53 510 reject_vc 5 ALIGNMENT 408 YS2-11l14.q1k chr09 444 20 119796 120220 C 425 99.76 446 accept 0 ALIGNMENT 959 YS2-11l15.q1k chr13 33 1115 762418 763493 F 1083 97.97 1164 accept 0 ALIGNMENT 959 YS2-11l15.p1k chr13 1157 25 763003 764136 C 1133 96.12 1241 accept 0 ALIGNMENT 0 YS2-11l16.q1k chr04 62 582 987167 987166 F 521 0.00 1205 reject_low 27 ALIGNMENT 987 YS2-11l16.p1k chr04 25 1193 875724 876896 F 1169 96.24 1244 reject_low 6 ALIGNMENT 0 YS2-11l16.q1k chr02 562 62 9422 9421 C 501 0.00 1205 reject_low 33 ALIGNMENT 0 YS2-11l16.q1k chr05 62 716 449142 449141 F 655 0.00 1205 reject_low 39 ALIGNMENT 0 YS2-11l16.q1k chr04 732 62 1353080 1353079 C 671 0.00 1205 reject_low 45 ALIGNMENT 642 YS2-11l16.p1k chr04 1193 25 879178 880350 C 1169 86.40 1244 reject_low 16 ALIGNMENT 315 YS2-11l16.q1k chr04 583 969 987167 987554 F 387 96.64 1205 reject_low 27 ALIGNMENT 996 YS2-11l16.p1k chr12 25 1193 945097 946269 F 1169 96.49 1244 reject_low 3 ALIGNMENT 63 YS2-11l16.q1k chr16 728 570 62202 62365 C 159 83.02 1205 reject_low 40 ALIGNMENT 1002 YS2-11l16.p1k chr06 25 1193 141816 142988 F 1169 96.66 1244 reject_low 7 ALIGNMENT 40 YS2-11l16.q1k chr10 743 858 537834 537948 F 116 81.03 1205 reject_low 42 ALIGNMENT 306 YS2-11l16.q1k chr05 560 890 135608 135939 F 331 99.70 1205 reject_low 32 ALIGNMENT 358 YS2-11l16.q1k chr15 1001 564 975804 976236 C 438 96.80 1205 reject_low 2 ALIGNMENT 596 YS2-11l16.p1k chr13 25 1193 200200 201372 F 1169 84.94 1244 reject_low 23 ALIGNMENT 0 YS2-11l16.q1k chr05 562 62 488158 488157 C 501 0.00 1205 reject_low 34 ALIGNMENT 295 YS2-11l16.q1k chr16 891 563 62388 62717 C 329 98.78 1205 reject_low 35 ALIGNMENT 300 YS2-11l16.q1k chr02 890 563 9093 9421 C 328 99.39 1205 reject_low 33 ALIGNMENT 0 YS2-11l16.q1k chr12 62 558 981364 981363 F 497 0.00 1205 reject_low 31 ALIGNMENT 0 YS2-11l16.q1k chr01 62 569 160249 160248 F 508 0.00 1205 reject_low 14 ALIGNMENT 353 YS2-11l16.q1k chr04 1001 563 877338 877771 C 439 96.36 1205 reject_low 6 ALIGNMENT 304 YS2-11l16.q1k chr04 890 559 1352634 1352966 C 332 99.40 1205 reject_low 29 ALIGNMENT 0 YS2-11l16.q1k chr04 562 62 987121 987120 C 501 0.00 1205 reject_low 5 ALIGNMENT 300 YS2-11l16.q1k chr05 890 563 487829 488157 C 328 99.39 1205 reject_low 34 ALIGNMENT 620 YS2-11l16.p1k chr13 25 1193 188033 189205 F 1169 85.63 1244 reject_low 19 ALIGNMENT 987 YS2-11l16.p1k chr15 1193 25 704943 706115 C 1169 96.24 1244 reject_low 11 ALIGNMENT 335 YS2-11l16.q1k chr14 560 1001 562034 562470 F 442 94.80 1205 reject_low 8 ALIGNMENT 0 YS2-11l16.q1k chr16 740 62 62827 62826 C 679 0.00 1205 reject_low 41 ALIGNMENT 0 YS2-11l16.q1k chr06 562 62 143864 143863 C 501 0.00 1205 reject_low 7 ALIGNMENT 151 YS2-11l16.q1k chr05 717 890 449142 449316 F 174 98.28 1205 reject_low 39 ALIGNMENT 999 YS2-11l16.p1k chr15 25 1193 974190 975362 F 1169 96.58 1244 reject_low 2 ALIGNMENT 627 YS2-11l16.p1k chr14 66 1193 523052 524183 F 1128 86.61 1244 reject_low 18 ALIGNMENT 0 YS2-11l16.q1k chr11 769 557 517504 517503 C 213 0.00 1205 accept 0 ALIGNMENT 27 YS2-11l16.q1k chr04 851 733 1352962 1353079 C 119 78.15 1205 reject_low 45 ALIGNMENT 43 YS2-11l16.q1k chr16 840 741 62726 62826 C 100 84.00 1205 reject_low 41 ALIGNMENT 338 YS2-11l16.q1k chr06 1001 563 143430 143863 C 439 95.22 1205 reject_low 7 ALIGNMENT 0 YS2-11l16.q1k chr03 559 62 90769 90768 C 498 0.00 1205 reject_low 4 ALIGNMENT 1002 YS2-11l16.p1k chr07 25 1193 815360 816532 F 1169 96.66 1244 reject_low 10 ALIGNMENT 441 YS2-11l16.p1k chr13 1153 25 357927 359054 C 1129 81.13 1244 reject_low 26 ALIGNMENT 0 YS2-11l16.q1k chr10 62 742 537834 537833 F 681 0.00 1205 reject_low 42 ALIGNMENT 0 YS2-11l16.q1k chr10 562 62 538346 538345 C 501 0.00 1205 reject_low 36 ALIGNMENT 0 YS2-11l16.q1k chr13 62 356 768368 768367 F 295 0.00 1205 reject_low 15 ALIGNMENT 0 YS2-11l16.q1k chr06 769 628 143870 143869 C 142 0.00 1205 reject_low 43 ALIGNMENT 0 YS2-11l16.q1k chr15 563 62 976237 976236 C 502 0.00 1205 reject_low 2 ALIGNMENT 0 YS2-11l16.p1k chr10 62 100 476322 476321 F 39 0.00 1244 reject_low 24 ALIGNMENT 1002 YS2-11l16.p1k chr07 1193 25 569623 570795 C 1169 96.66 1244 reject_low 1 ALIGNMENT 0 YS2-11l16.q1k chr07 62 559 568745 568744 F 498 0.00 1205 reject_low 1 ALIGNMENT 660 YS2-11l16.p1k chr04 1193 25 646377 647549 C 1169 86.91 1244 reject_low 17 ALIGNMENT 38 YS2-11l16.q1k chr04 632 815 877782 877963 F 184 77.72 1205 reject_low 16 ALIGNMENT 894 YS2-11l16.p1k chr12 1033 25 976780 977788 C 1009 97.82 1244 reject_low 9 ALIGNMENT 301 YS2-11l16.q1k chr12 559 890 981364 981696 F 332 99.10 1205 reject_low 31 ALIGNMENT 350 YS2-11l16.q1k chr12 563 1001 976257 976690 F 439 96.13 1205 reject_low 9 ALIGNMENT 310 YS2-11l16.p1k chr10 25 755 481830 482560 F 731 82.49 1244 reject_low 28 ALIGNMENT 32 YS2-11l16.q1k chr11 780 890 517314 517426 F 111 79.28 1205 reject_low 44 ALIGNMENT 356 YS2-11l16.q1k chr07 560 1001 568745 569181 F 442 96.38 1205 reject_low 1 ALIGNMENT 0 YS2-11l16.q1k chr04 62 631 877782 877781 F 570 0.00 1205 reject_low 16 ALIGNMENT 0 YS2-11l16.q1k chr12 62 562 976257 976256 F 501 0.00 1205 reject_low 9 ALIGNMENT 0 YS2-11l16.q1k chr04 558 62 1352967 1352966 C 497 0.00 1205 reject_low 29 ALIGNMENT 285 YS2-11l16.q1k chr05 869 563 449317 449623 C 307 99.67 1205 reject_low 37 ALIGNMENT 0 YS2-11l16.q1k chr01 62 569 165837 165836 F 508 0.00 1205 reject_low 38 ALIGNMENT 993 YS2-11l16.p1k chr14 1193 25 562912 564084 C 1169 96.41 1244 reject_low 8 ALIGNMENT 543 YS2-11l16.p1k chr13 1153 25 373625 374752 C 1129 84.06 1244 reject_low 25 ALIGNMENT 0 YS2-11l16.q1k chr16 769 729 62203 62202 C 41 0.00 1205 reject_low 40 ALIGNMENT 258 YS2-11l16.q1k chr01 570 1001 160249 160680 F 432 89.81 1205 reject_low 14 ALIGNMENT 347 YS2-11l16.q1k chr04 1001 563 986687 987120 C 439 95.90 1205 reject_low 5 ALIGNMENT 0 YS2-11l16.q1k chr12 559 62 947148 947147 C 498 0.00 1205 reject_low 3 ALIGNMENT 0 YS2-11l16.p1k chr10 756 922 482560 482559 F 167 0.00 1244 reject_low 28 ALIGNMENT 205 YS2-11l16.q1k chr01 570 890 165837 166163 F 321 90.65 1205 reject_low 38 ALIGNMENT 489 YS2-11l16.q1k chr11 556 36 517503 518024 C 521 98.66 1205 accept 0 ALIGNMENT 0 YS2-11l16.q1k chr16 562 62 62718 62717 C 501 0.00 1205 reject_low 35 ALIGNMENT 0 YS2-11l16.q1k chr06 569 62 143928 143927 C 508 0.00 1205 reject_low 43 ALIGNMENT 998 YS2-11l16.p1k chr04 25 1180 985073 986230 F 1156 96.80 1244 reject_low 5 ALIGNMENT 72 YS2-11l16.q1k chr13 357 431 768368 768442 F 75 100.00 1205 reject_low 15 ALIGNMENT 620 YS2-11l16.p1k chr16 25 1193 848280 849452 F 1169 85.63 1244 reject_low 20 ALIGNMENT 344 YS2-11l16.q1k chr03 1001 560 90332 90768 C 442 95.48 1205 reject_low 4 ALIGNMENT 0 YS2-11l16.q1k chr02 740 62 9001 9000 C 679 0.00 1205 reject_low 46 ALIGNMENT 0 YS2-11l16.q1k chr04 562 62 877772 877771 C 501 0.00 1205 reject_low 6 ALIGNMENT 617 YS2-11l16.p1k chr16 1193 25 805521 806693 C 1169 85.54 1244 reject_low 21 ALIGNMENT 954 YS2-11l16.p1k chr02 25 1193 33549 34721 F 1169 95.30 1244 reject_low 13 ALIGNMENT 347 YS2-11l16.q1k chr12 1001 560 946711 947147 C 442 95.70 1205 reject_low 3 ALIGNMENT 0 YS2-11l16.q1k chr05 562 62 449624 449623 C 501 0.00 1205 reject_low 37 ALIGNMENT 288 YS2-11l16.q1k chr10 890 563 538017 538345 C 328 98.17 1205 reject_low 36 ALIGNMENT 999 YS2-11l16.p1k chr03 25 1193 88718 89890 F 1169 96.58 1244 reject_low 4 ALIGNMENT 0 YS2-11l16.q1k chr13 432 769 768442 768441 F 338 0.00 1205 reject_low 15 ALIGNMENT 0 YS2-11l16.q1k chr16 569 62 62366 62365 C 508 0.00 1205 reject_low 40 ALIGNMENT 0 YS2-11l16.q1k chr14 62 559 562034 562033 F 498 0.00 1205 reject_low 8 ALIGNMENT 0 YS2-11l16.q1k chr13 558 62 768880 768879 C 497 0.00 1205 reject_low 30 ALIGNMENT 608 YS2-11l16.p1k chr16 1193 25 851509 852681 C 1169 85.29 1244 reject_low 22 ALIGNMENT 0 YS2-11l16.q1k chr05 62 559 135608 135607 F 498 0.00 1205 reject_low 32 ALIGNMENT 642 YS2-11l16.p1k chr01 1193 25 161122 162294 C 1169 86.40 1244 reject_low 14 ALIGNMENT 966 YS2-11l16.p1k chr04 1193 25 514563 515735 C 1169 95.64 1244 reject_low 12 ALIGNMENT 32 YS2-11l16.q1k chr06 627 570 143869 143927 C 58 89.66 1205 reject_low 43 ALIGNMENT 0 YS2-11l16.q1k chr11 62 779 517314 517313 F 718 0.00 1205 reject_low 44 ALIGNMENT 304 YS2-11l16.q1k chr13 890 559 768547 768879 C 332 99.40 1205 reject_low 30 ALIGNMENT 27 YS2-11l16.q1k chr02 819 741 8922 9000 C 79 82.28 1205 reject_low 46 ALIGNMENT 579 YS2-11l16.p1k chr10 101 1193 476322 477418 F 1093 85.54 1244 reject_low 24 ALIGNMENT 0 YS2-11l17.p1k chr16 62 347 650467 650466 F 286 0.00 1291 reject_low 3 ALIGNMENT 1008 YS2-11l17.q1k chr16 28 1152 516964 518094 F 1125 97.07 1156 accept 0 ALIGNMENT 0 YS2-11l17.p1k chr13 442 890 87056 87055 F 449 0.00 1291 reject_low 1 ALIGNMENT 0 YS2-11l17.p1k chr16 442 890 650560 650559 F 449 0.00 1291 reject_low 3 ALIGNMENT 21 YS2-11l17.p1k chr13 365 441 587631 587707 F 77 87.01 1291 reject_low 4 ALIGNMENT 22 YS2-11l17.p1k chr02 393 441 68281 68329 F 49 100.00 1291 reject_low 6 ALIGNMENT 35 YS2-11l17.p1k chr04 348 441 778729 778822 F 94 90.43 1291 reject_low 2 ALIGNMENT 23 YS2-11l17.p1k chr16 348 441 650467 650560 F 94 86.17 1291 reject_low 3 ALIGNMENT 21 YS2-11l17.p1k chr11 392 439 382192 382238 F 48 97.92 1291 reject_low 8 ALIGNMENT 0 YS2-11l17.p1k chr02 62 392 68281 68280 F 331 0.00 1291 reject_low 6 ALIGNMENT 0 YS2-11l17.p1k chr10 391 62 470096 470095 C 330 0.00 1291 reject_low 5 ALIGNMENT 0 YS2-11l17.p1k chr11 440 890 382238 382237 F 451 0.00 1291 reject_low 8 ALIGNMENT 0 YS2-11l17.p1k chr11 62 391 382192 382191 F 330 0.00 1291 reject_low 8 ALIGNMENT 0 YS2-11l17.p1k chr09 890 442 105771 105770 C 449 0.00 1291 reject_low 7 ALIGNMENT 0 YS2-11l17.p1k chr13 62 326 86942 86941 F 265 0.00 1291 reject_low 1 ALIGNMENT 38 YS2-11l17.p1k chr13 327 441 86942 87056 F 115 87.83 1291 reject_low 1 ALIGNMENT 25 YS2-11l17.p1k chr10 441 392 470046 470095 C 50 100.00 1291 reject_low 5 ALIGNMENT 0 YS2-11l17.p1k chr02 442 890 68329 68328 F 449 0.00 1291 reject_low 6 ALIGNMENT 0 YS2-11l17.p1k chr13 62 364 587631 587630 F 303 0.00 1291 reject_low 4 ALIGNMENT 0 YS2-11l17.p1k chr04 62 347 778729 778728 F 286 0.00 1291 reject_low 2 ALIGNMENT 0 YS2-11l17.p1k chr09 392 62 105819 105818 C 331 0.00 1291 reject_low 7 ALIGNMENT 813 YS2-11l17.p1k chr16 1184 35 520266 521427 C 1150 92.17 1291 accept 0 ALIGNMENT 0 YS2-11l17.p1k chr04 442 890 778822 778821 F 449 0.00 1291 reject_low 2 ALIGNMENT 22 YS2-11l17.p1k chr09 441 393 105770 105818 C 49 100.00 1291 reject_low 7 ALIGNMENT 0 YS2-11l17.p1k chr10 890 442 470047 470046 C 449 0.00 1291 reject_low 5 ALIGNMENT 0 YS2-11l17.p1k chr13 442 890 587707 587706 F 449 0.00 1291 reject_low 4 ALIGNMENT 966 YS2-11l21.q1k chr07 1106 37 510694 511761 C 1070 97.66 1106 accept 0 ALIGNMENT 925 YS2-11l22.q1k chr14 1102 29 532060 533120 C 1074 97.39 1109 accept 0 ALIGNMENT 939 YS2-11l24.q1k chr14 39 1116 149635 150711 F 1078 96.85 1120 accept 0 ALIGNMENT 910 YS2-11m01.p1k chr15 1164 30 747887 749026 C 1135 94.63 1166 accept 0 ALIGNMENT 889 YS2-11m01.q1k chr15 30 1057 745410 746430 F 1028 96.69 1060 accept 0 ALIGNMENT 768 YS2-11m03.p1k chr02 954 34 252847 253767 C 921 95.22 1177 accept 0 ALIGNMENT 901 YS2-11m03.q1k chr02 28 1086 251807 252867 F 1059 96.41 1093 accept 0 ALIGNMENT 111 YS2-11m04.q1k chr06 386 229 137670 137823 C 158 93.67 1129 reject_low 22 ALIGNMENT 0 YS2-11m04.q1k chr15 856 402 600404 600403 C 455 0.00 1129 reject_low 14 ALIGNMENT 0 YS2-11m04.q1k chr15 107 856 594759 594758 F 750 0.00 1129 reject_low 50 ALIGNMENT 0 YS2-11m04.q1k chr02 856 406 221037 221036 C 451 0.00 1129 reject_low 4 ALIGNMENT 0 YS2-11m04.q1k chr07 402 856 817729 817728 F 455 0.00 1129 reject_low 52 ALIGNMENT 158 YS2-11m04.q1k chr01 401 192 183136 183346 C 210 94.76 1129 reject_low 21 ALIGNMENT 819 YS2-11m04.q1k chr03 1128 189 150789 151730 C 940 97.55 1129 accept_chi 1 ALIGNMENT 0 YS2-11m04.q1k chr14 856 179 96621 96620 C 678 0.00 1129 reject_low 27 ALIGNMENT 0 YS2-11m04.q1k chr04 188 62 1175522 1175521 C 127 0.00 1129 reject_low 20 ALIGNMENT 108 YS2-11m04.q1k chr01 34 174 189597 189737 F 141 94.33 1129 reject_low 19 ALIGNMENT 0 YS2-11m04.q1k chr02 856 402 226625 226624 C 455 0.00 1129 reject_low 8 ALIGNMENT 0 YS2-11m04.q1k chr06 228 62 137824 137823 C 167 0.00 1129 reject_low 22 ALIGNMENT 192 YS2-11m04.q1k chr07 189 402 823098 823312 F 214 99.53 1129 reject_low 51 ALIGNMENT 0 YS2-11m04.q1k chr06 244 62 138066 138065 C 183 0.00 1129 reject_low 45 ALIGNMENT 64 YS2-11m04.q1k chr02 56 165 265358 265469 F 110 88.18 1129 reject_low 35 ALIGNMENT 0 YS2-11m04.q1k chr15 856 403 594821 594820 C 454 0.00 1129 reject_low 7 ALIGNMENT 0 YS2-11m04.q1k chr02 188 62 221254 221253 C 127 0.00 1129 reject_low 4 ALIGNMENT 0 YS2-11m04.q1k chr01 856 402 189421 189420 C 455 0.00 1129 reject_low 49 ALIGNMENT 0 YS2-11m04.q1k chr02 166 856 265469 265468 F 691 0.00 1129 reject_low 35 ALIGNMENT 67 YS2-11m04.q1k chr02 56 165 259773 259884 F 110 89.09 1129 reject_low 28 ALIGNMENT 67 YS2-11m04.q1k chr01 178 56 160249 160373 C 123 86.99 1129 reject_low 25 ALIGNMENT 0 YS2-11m04.q1k chr04 856 402 1175309 1175308 C 455 0.00 1129 reject_low 20 ALIGNMENT 188 YS2-11m04.q1k chr14 189 401 96728 96941 F 213 99.06 1129 reject_low 17 ALIGNMENT 32 YS2-11m04.q1k chr06 121 178 143869 143927 F 58 89.66 1129 reject_low 54 ALIGNMENT 0 YS2-11m04.q1k chr01 244 62 189578 189577 C 183 0.00 1129 reject_low 49 ALIGNMENT 0 YS2-11m04.q1k chr01 402 856 166163 166162 F 455 0.00 1129 reject_low 24 ALIGNMENT 191 YS2-11m04.q1k chr11 189 401 457901 458114 F 213 99.53 1129 reject_low 10 ALIGNMENT 64 YS2-11m04.q1k chr02 56 165 226821 226932 F 110 88.18 1129 reject_low 34 ALIGNMENT 0 YS2-11m04.q1k chr02 856 405 259574 259573 C 452 0.00 1129 reject_low 5 ALIGNMENT 188 YS2-11m04.q1k chr08 189 401 543728 543941 F 213 99.06 1129 reject_low 16 ALIGNMENT 182 YS2-11m04.q1k chr04 401 189 1175308 1175521 C 213 98.12 1129 reject_low 20 ALIGNMENT 189 YS2-11m04.q1k chr08 189 402 549424 549638 F 214 99.07 1129 reject_low 15 ALIGNMENT 0 YS2-11m04.q1k chr07 856 403 535215 535214 C 454 0.00 1129 reject_low 6 ALIGNMENT 64 YS2-11m04.q1k chr07 56 165 535412 535523 F 110 88.18 1129 reject_low 36 ALIGNMENT 64 YS2-11m04.q1k chr06 350 189 158408 158567 C 162 83.95 1129 reject_low 53 ALIGNMENT 33 YS2-11m04.q1k chr06 68 116 137851 137899 F 49 89.80 1129 reject_low 54 ALIGNMENT 0 YS2-11m04.q1k chr06 62 188 161916 161915 F 127 0.00 1129 reject_low 18 ALIGNMENT 192 YS2-11m04.q1k chr07 402 189 535214 535428 C 214 99.53 1129 reject_low 6 ALIGNMENT 0 YS2-11m04.q1k chr06 186 856 138236 138235 F 671 0.00 1129 reject_low 3 ALIGNMENT 0 YS2-11m04.q1k chr01 62 188 160357 160356 F 127 0.00 1129 reject_low 23 ALIGNMENT 0 YS2-11m04.q1k chr15 188 62 600617 600616 C 127 0.00 1129 reject_low 14 ALIGNMENT 67 YS2-11m04.q1k chr15 56 165 595018 595129 F 110 89.09 1129 reject_low 32 ALIGNMENT 191 YS2-11m04.q1k chr07 189 401 817516 817729 F 213 99.53 1129 reject_low 52 ALIGNMENT 0 YS2-11m04.q1k chr02 166 856 226932 226931 F 691 0.00 1129 reject_low 34 ALIGNMENT 0 YS2-11m04.q1k chr01 856 402 183137 183136 C 455 0.00 1129 reject_low 21 ALIGNMENT 0 YS2-11m04.q1k chr07 856 166 817422 817421 C 691 0.00 1129 reject_low 29 ALIGNMENT 0 YS2-11m04.q1k chr06 188 175 158568 161811 C 14 0.00 1129 reject_low 53 ALIGNMENT 52 YS2-11m04.q1k chr01 401 245 189420 189577 C 157 80.89 1129 reject_low 49 ALIGNMENT 0 YS2-11m04.q1k chr13 856 166 362610 362609 C 691 0.00 1129 reject_low 40 ALIGNMENT 55 YS2-11m04.q1k chr11 178 56 457793 457917 C 123 83.74 1129 reject_low 41 ALIGNMENT 67 YS2-11m04.q1k chr14 178 56 96620 96744 C 123 86.99 1129 reject_low 27 ALIGNMENT 192 YS2-11m04.q1k chr15 402 189 594820 595034 C 214 99.53 1129 reject_low 7 ALIGNMENT 0 YS2-11m04.q1k chr07 166 856 535523 535522 F 691 0.00 1129 reject_low 36 ALIGNMENT 0 YS2-11m04.q1k chr06 179 856 143927 143926 F 678 0.00 1129 reject_low 54 ALIGNMENT 67 YS2-11m04.q1k chr08 165 56 543633 543744 C 110 89.09 1129 reject_low 31 ALIGNMENT 0 YS2-11m04.q1k chr11 62 188 517213 517212 F 127 0.00 1129 reject_low 11 ALIGNMENT 191 YS2-11m04.q1k chr02 401 189 265161 265374 C 213 99.53 1129 reject_low 9 ALIGNMENT 0 YS2-11m04.q1k chr02 188 62 259790 259789 C 127 0.00 1129 reject_low 5 ALIGNMENT 97 YS2-11m04.q1k chr01 189 401 160357 160575 F 213 85.45 1129 reject_low 23 ALIGNMENT 0 YS2-11m04.q1k chr07 176 188 817398 817515 F 13 0.00 1129 reject_low 52 ALIGNMENT 0 YS2-11m04.q1k chr06 856 402 143536 143535 C 455 0.00 1129 reject_low 46 ALIGNMENT 0 YS2-11m04.q1k chr06 200 856 143877 143876 F 657 0.00 1129 reject_low 2 ALIGNMENT 191 YS2-11m04.q1k chr11 189 401 517213 517426 F 213 99.53 1129 reject_low 11 ALIGNMENT 0 YS2-11m04.q1k chr04 179 856 1175629 1175628 F 678 0.00 1129 reject_low 44 ALIGNMENT 191 YS2-11m04.q1k chr15 401 189 600403 600616 C 213 99.53 1129 reject_low 14 ALIGNMENT 0 YS2-11m04.q1k chr06 402 856 162129 162128 F 455 0.00 1129 reject_low 18 ALIGNMENT 0 YS2-11m04.q1k chr03 188 62 151731 151730 C 127 0.00 1129 accept_chi 1 ALIGNMENT 0 YS2-11m04.q1k chr01 175 856 183454 183453 F 682 0.00 1129 reject_low 47 ALIGNMENT 27 YS2-11m04.q1k chr15 52 106 594705 594759 F 55 83.64 1129 reject_low 50 ALIGNMENT 0 YS2-11m04.q1k chr08 62 188 543728 543727 F 127 0.00 1129 reject_low 16 ALIGNMENT 0 YS2-11m04.q1k chr11 856 166 517119 517118 C 691 0.00 1129 reject_low 38 ALIGNMENT 52 YS2-11m04.q1k chr04 56 178 1175505 1175629 F 123 82.93 1129 reject_low 44 ALIGNMENT 52 YS2-11m04.q1k chr01 81 174 183358 183454 F 94 88.30 1129 reject_low 47 ALIGNMENT 67 YS2-11m04.q1k chr01 178 56 165837 165961 C 123 86.99 1129 reject_low 26 ALIGNMENT 0 YS2-11m04.q1k chr01 402 856 160575 160574 F 455 0.00 1129 reject_low 23 ALIGNMENT 0 YS2-11m04.q1k chr02 856 402 265162 265161 C 455 0.00 1129 reject_low 9 ALIGNMENT 194 YS2-11m04.q1k chr02 405 189 221036 221253 C 217 99.54 1129 reject_low 4 ALIGNMENT 64 YS2-11m04.q1k chr11 165 56 517118 517229 C 110 88.18 1129 reject_low 38 ALIGNMENT 0 YS2-11m04.q1k chr07 176 188 817398 823097 F 13 0.00 1129 reject_low 51 ALIGNMENT 191 YS2-11m04.q1k chr13 189 401 357122 357335 F 213 99.53 1129 reject_low 12 ALIGNMENT 0 YS2-11m04.q1k chr02 166 856 221350 221349 F 691 0.00 1129 reject_low 42 ALIGNMENT 64 YS2-11m04.q1k chr13 165 56 357027 357138 C 110 88.18 1129 reject_low 39 ALIGNMENT 0 YS2-11m04.q1k chr13 402 856 362917 362916 F 455 0.00 1129 reject_low 13 ALIGNMENT 0 YS2-11m04.q1k chr13 402 856 357335 357334 F 455 0.00 1129 reject_low 12 ALIGNMENT 0 YS2-11m04.q1k chr15 188 62 595035 595034 C 127 0.00 1129 reject_low 7 ALIGNMENT 49 YS2-11m04.q1k chr07 104 175 817326 817397 F 72 93.06 1129 reject_low 51,52 ALIGNMENT 57 YS2-11m04.q1k chr02 56 165 221237 221350 F 110 86.36 1129 reject_low 42 ALIGNMENT 0 YS2-11m04.q1k chr03 179 856 151838 151837 F 678 0.00 1129 reject_low 43 ALIGNMENT 0 YS2-11m04.q1k chr14 62 188 96728 96727 F 127 0.00 1129 reject_low 17 ALIGNMENT 0 YS2-11m04.q1k chr06 856 387 137671 137670 C 470 0.00 1129 reject_low 22 ALIGNMENT 64 YS2-11m04.q1k chr06 401 245 137908 138065 C 157 83.44 1129 reject_low 45 ALIGNMENT 0 YS2-11m04.q1k chr01 62 188 165945 165944 F 127 0.00 1129 reject_low 24 ALIGNMENT 0 YS2-11m04.q1k chr06 856 351 158409 158408 C 506 0.00 1129 reject_low 53 ALIGNMENT 0 YS2-11m04.q1k chr15 856 285 594631 594630 C 572 0.00 1129 reject_low 48 ALIGNMENT 0 YS2-11m04.q1k chr13 62 188 357122 357121 F 127 0.00 1129 reject_low 12 ALIGNMENT 0 YS2-11m04.q1k chr13 856 166 357028 357027 C 691 0.00 1129 reject_low 39 ALIGNMENT 0 YS2-11m04.q1k chr07 62 103 817326 817325 F 42 0.00 1129 reject_low 51,52 ALIGNMENT 52 YS2-11m04.q1k chr03 56 178 151714 151838 F 123 82.93 1129 reject_low 43 ALIGNMENT 0 YS2-11m04.q1k chr07 856 166 823004 823003 C 691 0.00 1129 reject_low 30 ALIGNMENT 0 YS2-11m04.q1k chr11 402 856 517426 517425 F 455 0.00 1129 reject_low 11 ALIGNMENT 0 YS2-11m04.q1k chr15 188 62 594726 594725 C 127 0.00 1129 reject_low 48 ALIGNMENT 0 YS2-11m04.q1k chr15 166 856 600711 600710 F 691 0.00 1129 reject_low 33 ALIGNMENT 0 YS2-11m04.q1k chr11 402 856 458114 458113 F 455 0.00 1129 reject_low 10 ALIGNMENT 0 YS2-11m04.q1k chr11 62 188 457901 457900 F 127 0.00 1129 reject_low 10 ALIGNMENT 0 YS2-11m04.q1k chr02 188 62 226838 226837 C 127 0.00 1129 reject_low 8 ALIGNMENT 54 YS2-11m04.q1k chr15 284 189 594630 594725 C 96 89.58 1129 reject_low 48 ALIGNMENT 955 YS2-11m04.p1k chr07 25 1075 853299 854358 F 1051 98.10 1194 accept_chi 0 ALIGNMENT 0 YS2-11m04.q1k chr01 856 179 160250 160249 C 678 0.00 1129 reject_low 25 ALIGNMENT 0 YS2-11m04.q1k chr06 244 62 143693 143692 C 183 0.00 1129 reject_low 46 ALIGNMENT 0 YS2-11m04.q1k chr07 188 62 535429 535428 C 127 0.00 1129 reject_low 6 ALIGNMENT 128 YS2-11m04.q1k chr06 34 185 138085 138236 F 152 96.71 1129 reject_low 3 ALIGNMENT 128 YS2-11m04.q1k chr06 34 199 143712 143877 F 166 94.58 1129 reject_low 2 ALIGNMENT 64 YS2-11m04.q1k chr13 165 56 362609 362720 C 110 88.18 1129 reject_low 40 ALIGNMENT 0 YS2-11m04.q1k chr14 402 856 96941 96940 F 455 0.00 1129 reject_low 17 ALIGNMENT 0 YS2-11m04.q1k chr08 62 188 549424 549423 F 127 0.00 1129 reject_low 15 ALIGNMENT 191 YS2-11m04.q1k chr02 401 189 226624 226837 C 213 99.53 1129 reject_low 8 ALIGNMENT 0 YS2-11m04.q1k chr06 117 120 137900 143868 F 4 0.00 1129 reject_low 54 ALIGNMENT 0 YS2-11m04.q1k chr07 403 856 823312 823311 F 454 0.00 1129 reject_low 51 ALIGNMENT 0 YS2-11m04.q1k chr02 166 856 259884 259883 F 691 0.00 1129 reject_low 28 ALIGNMENT 57 YS2-11m04.q1k chr06 174 56 161812 161932 C 119 84.87 1129 reject_low 53 ALIGNMENT 0 YS2-11m04.q1k chr01 175 856 189737 189736 F 682 0.00 1129 reject_low 19 ALIGNMENT 0 YS2-11m04.q1k chr15 166 856 595129 595128 F 691 0.00 1129 reject_low 32 ALIGNMENT 0 YS2-11m04.q1k chr08 403 856 549638 549637 F 454 0.00 1129 reject_low 15 ALIGNMENT 67 YS2-11m04.q1k chr07 165 56 823003 823114 C 110 89.09 1129 reject_low 30 ALIGNMENT 0 YS2-11m04.q1k chr13 62 188 362704 362703 F 127 0.00 1129 reject_low 13 ALIGNMENT 67 YS2-11m04.q1k chr15 56 165 600600 600711 F 110 89.09 1129 reject_low 33 ALIGNMENT 67 YS2-11m04.q1k chr07 165 56 817421 817532 C 110 89.09 1129 reject_low 29 ALIGNMENT 0 YS2-11m04.q1k chr11 856 179 457794 457793 C 678 0.00 1129 reject_low 41 ALIGNMENT 64 YS2-11m04.q1k chr08 165 56 549329 549440 C 110 88.18 1129 reject_low 37 ALIGNMENT 0 YS2-11m04.q1k chr01 191 62 183347 183346 C 130 0.00 1129 reject_low 21 ALIGNMENT 0 YS2-11m04.q1k chr02 188 62 265375 265374 C 127 0.00 1129 reject_low 9 ALIGNMENT 191 YS2-11m04.q1k chr13 189 401 362704 362917 F 213 99.53 1129 reject_low 13 ALIGNMENT 0 YS2-11m04.q1k chr01 62 80 183358 183357 F 19 0.00 1129 reject_low 47 ALIGNMENT 190 YS2-11m04.q1k chr02 404 189 259573 259789 C 216 99.07 1129 reject_low 5 ALIGNMENT 0 YS2-11m04.q1k chr01 856 179 165838 165837 C 678 0.00 1129 reject_low 26 ALIGNMENT 64 YS2-11m04.q1k chr06 401 245 143535 143692 C 157 83.44 1129 reject_low 46 ALIGNMENT 0 YS2-11m04.q1k chr08 856 166 543634 543633 C 691 0.00 1129 reject_low 31 ALIGNMENT 0 YS2-11m04.q1k chr06 856 402 137909 137908 C 455 0.00 1129 reject_low 45 ALIGNMENT 97 YS2-11m04.q1k chr01 189 401 165945 166163 F 213 85.45 1129 reject_low 24 ALIGNMENT 185 YS2-11m04.q1k chr06 189 401 161916 162129 F 213 98.59 1129 reject_low 18 ALIGNMENT 0 YS2-11m04.q1k chr08 856 166 549330 549329 C 691 0.00 1129 reject_low 37 ALIGNMENT 0 YS2-11m04.q1k chr08 402 856 543941 543940 F 455 0.00 1129 reject_low 16 ALIGNMENT 42 YS2-11m05.q1k vc_3 217 176 2472 2513 C 42 100.00 217 reject_low 2 ALIGNMENT 0 YS2-11m05.q1k vc_3 175 62 2514 2513 C 114 0.00 217 reject_low 2 ALIGNMENT 42 YS2-11m05.q1k vc_4 176 217 5830 5871 F 42 100.00 217 reject_low 3 ALIGNMENT 42 YS2-11m05.q1k vc_1 217 176 2472 2513 C 42 100.00 217 reject_low 1 ALIGNMENT 0 YS2-11m05.q1k vc_1 175 62 2514 2513 C 114 0.00 217 reject_low 1 ALIGNMENT 0 YS2-11m05.q1k chr11 177 217 124910 124909 F 41 0.00 217 accept 0 ALIGNMENT 0 YS2-11m05.q1k vc_4 62 175 5830 5829 F 114 0.00 217 reject_low 3 ALIGNMENT 0 YS2-11m05.q1k vc_5 178 62 5064 5063 C 117 0.00 217 reject_low 4 ALIGNMENT 39 YS2-11m05.q1k vc_5 217 179 5025 5063 C 39 100.00 217 reject_low 4 ALIGNMENT 0 YS2-11m05.q1k vc_7 62 179 13525 13524 F 118 0.00 217 reject_low 5 ALIGNMENT 38 YS2-11m05.q1k vc_7 180 217 13525 13562 F 38 100.00 217 reject_low 5 ALIGNMENT 36 YS2-11m05.q1k vc_5 214 179 1 36 C 36 100.00 217 reject_low 6 ALIGNMENT 124 YS2-11m05.q1k chr11 33 176 124767 124910 F 144 96.53 217 accept 0 ALIGNMENT 0 YS2-11m05.q1k vc_5 178 62 37 36 C 117 0.00 217 reject_low 6 ALIGNMENT 21 YS2-11m07.q1k chr04 238 273 923042 923077 F 36 94.44 1141 reject_low 13 ALIGNMENT 0 YS2-11m07.q1k chr02 787 275 780326 780325 C 513 0.00 1141 reject_low 2 ALIGNMENT 0 YS2-11m07.q1k chr11 274 787 381330 381329 F 514 0.00 1141 reject_low 9 ALIGNMENT 0 YS2-11m07.q1k chr15 199 62 237030 237029 C 138 0.00 1141 reject_low 3 ALIGNMENT 23 YS2-11m07.q1k chr09 236 274 169451 169489 F 39 94.87 1141 reject_low 10 ALIGNMENT 26 YS2-11m07.q1k chr13 274 225 354556 354605 C 50 94.00 1141 reject_low 7 ALIGNMENT 0 YS2-11m07.q1k chr04 262 787 923095 923094 F 526 0.00 1141 reject_low 8 ALIGNMENT 0 YS2-11m07.q1k chr13 224 62 354606 354605 C 163 0.00 1141 reject_low 7 ALIGNMENT 0 YS2-11m07.q1k chr14 228 62 604267 604266 C 167 0.00 1141 reject_low 12 ALIGNMENT 0 YS2-11m07.q1k chr02 787 274 780390 780389 C 514 0.00 1141 reject_low 4 ALIGNMENT 22 YS2-11m07.q1k chr02 273 232 780425 780466 C 42 92.86 1141 reject_low 11 ALIGNMENT 32 YS2-11m07.q1k chr15 270 200 236960 237029 C 71 91.55 1141 reject_low 3 ALIGNMENT 0 YS2-11m07.q1k chr04 274 787 923077 923076 F 514 0.00 1141 reject_low 13 ALIGNMENT 0 YS2-11m07.q1k chr13 787 275 354557 354556 C 513 0.00 1141 reject_low 7 ALIGNMENT 0 YS2-11m07.q1k chr14 254 787 720317 720316 F 534 0.00 1141 reject_low 6 ALIGNMENT 0 YS2-11m07.q1k chr02 787 268 505200 505199 C 520 0.00 1141 reject_low 5 ALIGNMENT 0 YS2-11m07.q1k chr06 245 787 88016 88015 F 543 0.00 1141 reject_low 1 ALIGNMENT 26 YS2-11m07.q1k chr02 267 214 505199 505252 C 54 92.59 1141 reject_low 5 ALIGNMENT 31 YS2-11m07.q1k chr02 273 206 780389 780456 C 68 91.18 1141 reject_low 4 ALIGNMENT 0 YS2-11m07.q1k chr04 62 237 923042 923041 F 176 0.00 1141 reject_low 13 ALIGNMENT 0 YS2-11m07.q1k chr14 787 265 604232 604231 C 523 0.00 1141 reject_low 12 ALIGNMENT 22 YS2-11m07.q1k chr04 208 261 923042 923095 F 54 88.89 1141 reject_low 8 ALIGNMENT 0 YS2-11m07.q1k chr06 234 62 160595 160594 C 173 0.00 1141 reject_low 14 ALIGNMENT 22 YS2-11m07.q1k chr06 267 235 160562 160594 C 33 96.97 1141 reject_low 14 ALIGNMENT 0 YS2-11m07.q1k chr04 62 207 923042 923041 F 146 0.00 1141 reject_low 8 ALIGNMENT 0 YS2-11m07.q1k chr02 213 62 505253 505252 C 152 0.00 1141 reject_low 5 ALIGNMENT 0 YS2-11m07.q1k chr11 62 225 381283 381282 F 164 0.00 1141 reject_low 9 ALIGNMENT 23 YS2-11m07.q1k chr14 264 229 604231 604266 C 36 97.22 1141 reject_low 12 ALIGNMENT 176 YS2-11m07.q1k chr06 34 244 87806 88016 F 211 97.16 1141 reject_low 1 ALIGNMENT 22 YS2-11m07.q1k chr14 208 253 720272 720317 F 46 91.30 1141 reject_low 6 ALIGNMENT 27 YS2-11m07.q1k chr02 274 187 780325 780412 C 88 86.36 1141 reject_low 2 ALIGNMENT 0 YS2-11m07.q1k chr02 186 62 780413 780412 C 125 0.00 1141 reject_low 2 ALIGNMENT 1035 YS2-11m07.p1k chr06 1194 35 90703 91864 C 1160 97.59 1194 accept 0 ALIGNMENT 0 YS2-11m07.q1k chr14 62 207 720272 720271 F 146 0.00 1141 reject_low 6 ALIGNMENT 0 YS2-11m07.q1k chr09 62 235 169451 169450 F 174 0.00 1141 reject_low 10 ALIGNMENT 0 YS2-11m07.q1k chr02 205 62 780457 780456 C 144 0.00 1141 reject_low 4 ALIGNMENT 0 YS2-11m07.q1k chr02 231 62 780467 780466 C 170 0.00 1141 reject_low 11 ALIGNMENT 774 YS2-11m07.q1k chr06 224 1137 87966 88877 F 914 96.28 1141 accept 0 ALIGNMENT 0 YS2-11m07.q1k chr02 787 274 780426 780425 C 514 0.00 1141 reject_low 11 ALIGNMENT 0 YS2-11m07.q1k chr15 787 271 236961 236960 C 517 0.00 1141 reject_low 3 ALIGNMENT 0 YS2-11m07.q1k chr06 787 268 160563 160562 C 520 0.00 1141 reject_low 14 ALIGNMENT 25 YS2-11m07.q1k chr11 226 273 381283 381330 F 48 93.75 1141 reject_low 9 ALIGNMENT 0 YS2-11m07.q1k chr09 275 787 169489 169488 F 513 0.00 1141 reject_low 10 ALIGNMENT 0 YS2-11m07.q1k chr06 62 223 87966 87965 F 162 0.00 1141 accept 0 ALIGNMENT 0 YS2-11m08.p1k chrm 62 124 9030 9029 F 63 0.00 1248 reject_low 17 ALIGNMENT 890 YS2-11m08.p1k chrm 29 1225 43000 44199 F 1197 95.66 1248 reject_bad_break 0 ALIGNMENT 34 YS2-11m08.p1k chrm 168 125 2752 2795 C 44 95.45 1248 reject_low 16 ALIGNMENT 0 YS2-11m08.q1k chrm 847 848 44197 44242 C 0 0.00 1178 reject_bad_break 0 ALIGNMENT 0 YS2-11m08.p1k chrm 985 169 2753 2752 C 817 0.00 1248 reject_low 16 ALIGNMENT 39 YS2-11m08.p1k chrm 125 190 83052 83116 F 66 89.39 1248 reject_low 13 ALIGNMENT 23 YS2-11m08.p1k chrm 1004 1042 2092 2129 F 39 79.49 1248 reject_low 18 ALIGNMENT 0 YS2-11m08.p1k chrm 62 126 10394 10393 F 65 0.00 1248 reject_low 12 ALIGNMENT 0 YS2-11m08.q1k chrm 839 230 30155 30154 C 610 0.00 1178 reject_low 2 ALIGNMENT 29 YS2-11m08.p1k chrm 1083 970 9453 9568 C 114 70.18 1248 reject_low 9 ALIGNMENT 35 YS2-11m08.p1k chrm 981 1042 29815 29875 F 62 80.65 1248 reject_low 11 ALIGNMENT 0 YS2-11m08.p1k chrm 169 985 9073 9072 F 817 0.00 1248 reject_low 17 ALIGNMENT 0 YS2-11m08.p1k chrm 105 62 71274 71273 C 44 0.00 1248 reject_low 5 ALIGNMENT 37 YS2-11m08.p1k chrm 127 193 10394 10459 F 67 86.57 1248 reject_low 12 ALIGNMENT 33 YS2-11m08.p1k chrm 168 124 67947 67991 C 45 93.33 1248 reject_low 7 ALIGNMENT 74 YS2-11m08.q1k chrm 994 848 44048 44196 C 147 91.84 1178 reject_bad_break 0 ALIGNMENT 0 YS2-11m08.p1k chrm 62 116 52762 52761 F 55 0.00 1248 reject_low 8 ALIGNMENT 0 YS2-11m08.p1k chrm 188 971 3120 8999 F 784 0.00 1248 reject_low 20 ALIGNMENT 0 YS2-11m08.p1k chrm 62 119 3054 3053 F 58 0.00 1248 reject_low 20 ALIGNMENT 0 YS2-11m08.p1k chrm 62 122 29837 29836 F 61 0.00 1248 reject_low 1,2,6 ALIGNMENT 0 YS2-11m08.q1k chrm 229 839 4376 4375 F 611 0.00 1178 reject_low 4 ALIGNMENT 33 YS2-11m08.p1k chrm 137 181 66837 66881 F 45 91.11 1248 reject_low 22 ALIGNMENT 45 YS2-11m08.p1k chrm 179 106 71203 71273 C 74 89.19 1248 reject_low 5 ALIGNMENT 0 YS2-11m08.q1k chrm 301 839 56971 56970 F 539 0.00 1178 reject_low 5 ALIGNMENT 110 YS2-11m08.q1k chrm 34 228 12652 12844 F 195 89.74 1178 reject_low 3 ALIGNMENT 0 YS2-11m08.p1k chrm 173 985 29886 29885 F 813 0.00 1248 reject_low 1,2,6 ALIGNMENT 30 YS2-11m08.p1k chrm 1078 998 67914 67997 C 81 69.14 1248 reject_low 5 ALIGNMENT 33 YS2-11m08.p1k chrm 117 211 52762 52857 F 95 80.00 1248 reject_low 8 ALIGNMENT 0 YS2-11m08.p1k chrm 62 123 2092 2091 F 62 0.00 1248 reject_low 21 ALIGNMENT 95 YS2-11m08.q1k chrm 33 300 56700 56971 F 268 85.45 1178 reject_low 5 ALIGNMENT 0 YS2-11m08.p1k chrm 123 62 67992 67991 C 62 0.00 1248 reject_low 7 ALIGNMENT 25 YS2-11m08.p1k chrm 1005 1055 69442 69492 F 51 76.47 1248 reject_low 22 ALIGNMENT 0 YS2-11m08.q1k chrm 168 839 54844 54843 F 672 0.00 1178 reject_low 7 ALIGNMENT 39 YS2-11m08.p1k chrm 125 185 69442 69500 F 61 90.16 1248 reject_low 14 ALIGNMENT 22 YS2-11m08.p1k chrm 972 1083 9000 9109 F 112 69.64 1248 reject_low 20,21 ALIGNMENT 61 YS2-11m08.q1k chrm 162 24 32232 32371 C 139 87.77 1178 reject_low 6 ALIGNMENT 116 YS2-11m08.q1k chrm 229 36 30154 30347 C 194 90.72 1178 reject_low 2 ALIGNMENT 0 YS2-11m08.p1k chrm 212 985 52857 52856 F 774 0.00 1248 reject_low 8 ALIGNMENT 39 YS2-11m08.p1k chrm 174 125 9484 9533 C 50 94.00 1248 reject_low 4 ALIGNMENT 42 YS2-11m08.p1k chrm 123 172 29837 29886 F 50 96.00 1248 reject_low 1,2,6 ALIGNMENT 0 YS2-11m08.p1k chrm 994 62 2805 2804 C 933 0.00 1248 reject_low 15 ALIGNMENT 0 YS2-11m08.p1k chrm 194 985 10459 10458 F 792 0.00 1248 reject_low 12 ALIGNMENT 0 YS2-11m08.q1k chrm 229 839 12844 12843 F 611 0.00 1178 reject_low 3 ALIGNMENT 0 YS2-11m08.p1k chrm 191 985 83116 83115 F 795 0.00 1248 reject_low 13 ALIGNMENT 0 YS2-11m08.p1k chrm 62 1004 83052 83051 F 943 0.00 1248 reject_low 19 ALIGNMENT 0 YS2-11m08.p1k chrm 170 971 2138 8999 F 802 0.00 1248 reject_low 21 ALIGNMENT 28 YS2-11m08.p1k chrm 1042 995 2759 2804 C 48 79.17 1248 reject_low 15 ALIGNMENT 21 YS2-11m08.p1k chrm 1005 1042 83052 83088 F 38 78.95 1248 reject_low 19 ALIGNMENT 0 YS2-11m08.p1k chrm 62 980 29815 29814 F 919 0.00 1248 reject_low 11 ALIGNMENT 0 YS2-11m08.p1k chrm 186 985 69500 69499 F 800 0.00 1248 reject_low 14 ALIGNMENT 0 YS2-11m08.p1k chrm 182 1004 66882 69441 F 823 0.00 1248 reject_low 22 ALIGNMENT 46 YS2-11m08.p1k chrm 120 187 3054 3119 F 68 91.18 1248 reject_low 20 ALIGNMENT 88 YS2-11m08.q1k chrm 33 228 4182 4376 F 196 85.71 1178 reject_low 4 ALIGNMENT 34 YS2-11m08.p1k chrm 125 168 9030 9073 F 44 95.45 1248 reject_low 17 ALIGNMENT 0 YS2-11m08.p1k chrm 62 124 83052 83051 F 63 0.00 1248 reject_low 13 ALIGNMENT 0 YS2-11m08.p1k chrm 985 175 9485 9484 C 811 0.00 1248 reject_low 4 ALIGNMENT 0 YS2-11m08.p1k chrm 960 62 71299 71298 C 899 0.00 1248 reject_low 10 ALIGNMENT 0 YS2-11m08.p1k chrm 124 62 9534 9533 C 63 0.00 1248 reject_low 4 ALIGNMENT 0 YS2-11m08.q1k chrm 477 62 44613 44612 C 416 0.00 1178 reject_low 1 ALIGNMENT 0 YS2-11m08.p1k chrm 997 180 67998 71202 C 818 0.00 1248 reject_low 5 ALIGNMENT 28 YS2-11m08.p1k chrm 1042 961 71221 71298 C 82 76.83 1248 reject_low 10 ALIGNMENT 37 YS2-11m08.p1k chrm 124 169 2092 2137 F 46 95.65 1248 reject_low 21 ALIGNMENT 665 YS2-11m08.q1k chrm 847 33 44243 45056 C 815 99.51 1178 reject_bad_break 0 ALIGNMENT 0 YS2-11m08.p1k chrm 985 169 67948 67947 C 817 0.00 1248 reject_low 7 ALIGNMENT 0 YS2-11m08.p1k chrm 62 136 66837 66836 F 75 0.00 1248 reject_low 22 ALIGNMENT 46 YS2-11m08.q1k chrm 24 167 54699 54844 F 144 84.03 1178 reject_low 7 ALIGNMENT 294 YS2-11m08.q1k chrm 1089 478 43958 44612 C 612 88.40 1178 reject_low 1 ALIGNMENT 0 YS2-11m08.p1k chrm 62 1003 2092 2091 F 942 0.00 1248 reject_low 18 ALIGNMENT 0 YS2-11m08.p1k chrm 969 62 9569 9568 C 908 0.00 1248 reject_low 9 ALIGNMENT 0 YS2-11m08.p1k chrm 124 62 2796 2795 C 63 0.00 1248 reject_low 16 ALIGNMENT 0 YS2-11m08.q1k chrm 839 163 32233 32232 C 677 0.00 1178 reject_low 6 ALIGNMENT 0 YS2-11m08.p1k chrm 62 124 69442 69441 F 63 0.00 1248 reject_low 14 ALIGNMENT 946 YS2-11m09.q1k chr04 37 1164 1284067 1285189 F 1128 96.10 1178 accept 0 ALIGNMENT 914 YS2-11m09.p1k chr04 1110 30 1286393 1287471 C 1081 95.47 1181 accept 0 ALIGNMENT 40 YS2-11m11.q1k vc_3 454 415 2472 2511 C 40 100.00 454 reject_low 4 ALIGNMENT 0 YS2-11m11.q1k vc_7 92 416 13525 13524 F 325 0.00 454 reject_low 7 ALIGNMENT 360 YS2-11m11.p1k chr05 34 419 220666 221051 F 386 99.22 437 accept_chi 0 ALIGNMENT 36 YS2-11m11.q1k vc_5 451 416 1 36 C 36 100.00 454 reject_low 8 ALIGNMENT 0 YS2-11m11.q1k chr05 454 415 220667 220666 C 40 0.00 454 accept_chi 1 ALIGNMENT 0 YS2-11m11.q1k vc_5 415 92 5064 5063 C 324 0.00 454 reject_low 6 ALIGNMENT 0 YS2-11m11.q1k vc_2 414 92 2145 2144 C 323 0.00 454 reject_low 3 ALIGNMENT 352 YS2-11m11.q1k chr05 414 29 220666 221051 C 386 98.45 454 accept_chi 1 ALIGNMENT 0 YS2-11m11.q1k vc_5 415 92 37 36 C 324 0.00 454 reject_low 8 ALIGNMENT 40 YS2-11m11.q1k vc_1 454 415 2472 2511 C 40 100.00 454 reject_low 2 ALIGNMENT 0 YS2-11m11.q1k vc_3 414 92 2512 2511 C 323 0.00 454 reject_low 4 ALIGNMENT 38 YS2-11m11.q1k vc_7 417 454 13525 13562 F 38 100.00 454 reject_low 7 ALIGNMENT 0 YS2-11m11.p1k chr05 420 437 221051 221050 F 18 0.00 437 accept_chi 0 ALIGNMENT 40 YS2-11m11.q1k vc_4 415 454 5832 5871 F 40 100.00 454 reject_low 5 ALIGNMENT 40 YS2-11m11.q1k vc_2 454 415 2105 2144 C 40 100.00 454 reject_low 3 ALIGNMENT 0 YS2-11m11.q1k vc_4 92 414 5832 5831 F 323 0.00 454 reject_low 5 ALIGNMENT 39 YS2-11m11.q1k vc_5 454 416 5025 5063 C 39 100.00 454 reject_low 6 ALIGNMENT 0 YS2-11m11.q1k vc_1 414 92 2512 2511 C 323 0.00 454 reject_low 2 ALIGNMENT 981 YS2-11m14.p1k chr11 1171 31 117547 118698 C 1141 96.14 1210 accept 0 ALIGNMENT 20 YS2-11m14.q1k chr14 440 474 694239 694273 F 35 97.14 1148 reject_low 3 ALIGNMENT 21 YS2-11m14.q1k chr15 473 438 355085 355120 C 36 100.00 1148 reject_low 2 ALIGNMENT 0 YS2-11m14.q1k chr14 62 439 694239 694238 F 378 0.00 1148 reject_low 3 ALIGNMENT 927 YS2-11m14.q1k chr11 29 1140 114365 115466 F 1112 96.04 1148 accept 0 ALIGNMENT 0 YS2-11m14.q1k chr15 806 474 355086 355085 C 333 0.00 1148 reject_low 2 ALIGNMENT 0 YS2-11m14.q1k chr14 475 806 694273 694272 F 332 0.00 1148 reject_low 3 ALIGNMENT 0 YS2-11m14.q1k chr14 442 62 694274 694273 C 381 0.00 1148 reject_low 1 ALIGNMENT 20 YS2-11m14.q1k chr14 482 443 694234 694273 C 40 92.50 1148 reject_low 1 ALIGNMENT 0 YS2-11m14.q1k chr15 437 62 355121 355120 C 376 0.00 1148 reject_low 2 ALIGNMENT 0 YS2-11m14.q1k chr14 806 483 694235 694234 C 324 0.00 1148 reject_low 1 ALIGNMENT 927 YS2-11m15.p1k chr02 64 1108 301598 302647 F 1045 96.75 1238 accept 0 ALIGNMENT 953 YS2-11m15.q1k chr02 1149 32 305330 306432 C 1118 96.69 1239 accept 0 ALIGNMENT 76 YS2-11m16.q1k vc_4 835 755 1453 1534 C 81 98.77 1248 reject_low 10 ALIGNMENT 0 YS2-11m16.q1k vc_7 913 62 6412 6411 C 852 0.00 1248 reject_low 11 ALIGNMENT 38 YS2-11m16.q1k vc_7 718 755 13525 13562 F 38 100.00 1248 reject_low 17 ALIGNMENT 664 YS2-11m16.q1k chr14 30 715 328687 329372 F 686 99.85 1248 accept_chi 1 ALIGNMENT 0 YS2-11m16.q1k chr14 716 831 329372 329371 F 116 0.00 1248 accept_chi 1 ALIGNMENT 664 YS2-11m16.p1k chr14 710 25 328687 329372 C 686 99.85 729 accept_chi 0 ALIGNMENT 304 YS2-11m16.q1k vc_5 755 1240 2398 2885 F 486 88.48 1248 reject_low 3 ALIGNMENT 141 YS2-11m16.q1k vc_4 755 914 6353 6514 F 160 96.88 1248|1,0 reject_low 9 ALIGNMENT 0 YS2-11m16.q1k vc_2 714 62 2146 2145 C 653 0.00 1248 reject_low 13 ALIGNMENT 0 YS2-11m16.q1k vc_7 62 717 63 62 F 656 0.00 1248 reject_low 16 ALIGNMENT 0 YS2-11m16.q1k vc_3 831 756 2473 2472 C 76 0.00 1248 reject_low 14 ALIGNMENT 0 YS2-11m16.q1k vc_5 831 756 5026 5025 C 76 0.00 1248 reject_low 15 ALIGNMENT 115 YS2-11m16.q1k vc_7 1181 963 4955 5172 C 219 85.39 1248|0,1 reject_low 11 ALIGNMENT 46 YS2-11m16.q1k vc_7 964 914 6360 6411 C 51 98.04 1248|1,0 reject_low 11 ALIGNMENT 0 YS2-11m16.q1k vc_2 62 754 2164 2163 F 693 0.00 1248 reject_low 6 ALIGNMENT 0 YS2-11m16.q1k vc_4 756 755 5872 6353 F 0 0.00 1248 reject_low 9 ALIGNMENT 39 YS2-11m16.q1k vc_5 755 717 5025 5063 C 39 100.00 1248 reject_low 15 ALIGNMENT 0 YS2-11m16.q1k vc_7 754 62 2728 2727 C 693 0.00 1248 reject_low 2 ALIGNMENT 41 YS2-11m16.q1k vc_4 715 755 5831 5871 F 41 100.00 1248 reject_low 9 ALIGNMENT 298 YS2-11m16.q1k vc_3 755 1181 2531 2958 F 427 90.87 1248 reject_low 7 ALIGNMENT 0 YS2-11m16.q1k vc_5 716 62 5064 5063 C 655 0.00 1248 reject_low 15 ALIGNMENT 0 YS2-11m16.q1k vc_4 754 62 5813 5812 C 693 0.00 1248 reject_low 4 ALIGNMENT 0 YS2-11m16.q1k vc_5 716 62 37 36 C 655 0.00 1248 reject_low 18 ALIGNMENT 0 YS2-11m16.q1k vc_4 62 714 5831 5830 F 653 0.00 1248 reject_low 9 ALIGNMENT 0 YS2-11m16.q1k vc_7 62 717 13525 13524 F 656 0.00 1248 reject_low 17 ALIGNMENT 0 YS2-11m16.q1k vc_2 831 756 2106 2105 C 76 0.00 1248 reject_low 13 ALIGNMENT 297 YS2-11m16.q1k vc_4 1245 755 5319 5812 C 491 88.39 1248 reject_low 4 ALIGNMENT 298 YS2-11m16.q1k vc_1 755 1181 2531 2958 F 427 90.87 1248 reject_low 5 ALIGNMENT 0 YS2-11m16.q1k vc_7 963 964 5172 6360 C 0 0.00 1248 reject_low 11 ALIGNMENT 0 YS2-11m16.q1k vc_4 62 754 126 125 F 693 0.00 1248 reject_low 8 ALIGNMENT 0 YS2-11m16.q1k vc_7 756 831 100 99 F 76 0.00 1248 reject_low 16 ALIGNMENT 0 YS2-11m16.p1k chr14 729 711 328688 328687 C 19 0.00 729 accept_chi 0 ALIGNMENT 298 YS2-11m16.q1k vc_2 755 1181 2164 2591 F 427 90.87 1248 reject_low 6 ALIGNMENT 0 YS2-11m16.q1k vc_1 831 756 2473 2472 C 76 0.00 1248 reject_low 12 ALIGNMENT 0 YS2-11m16.q1k vc_5 831 753 2 1 C 79 0.00 1248 reject_low 18 ALIGNMENT 0 YS2-11m16.q1k vc_5 62 754 2398 2397 F 693 0.00 1248 reject_low 3 ALIGNMENT 41 YS2-11m16.q1k vc_1 755 715 2472 2512 C 41 100.00 1248 reject_low 12 ALIGNMENT 0 YS2-11m16.q1k vc_3 62 754 2531 2530 F 693 0.00 1248 reject_low 7 ALIGNMENT 0 YS2-11m16.q1k vc_4 754 62 1535 1534 C 693 0.00 1248 reject_low 10 ALIGNMENT 41 YS2-11m16.q1k vc_2 755 715 2105 2145 C 41 100.00 1248 reject_low 13 ALIGNMENT 0 YS2-11m16.q1k vc_1 62 754 2531 2530 F 693 0.00 1248 reject_low 5 ALIGNMENT 41 YS2-11m16.q1k vc_3 755 715 2472 2512 C 41 100.00 1248 reject_low 14 ALIGNMENT 0 YS2-11m16.q1k vc_1 714 62 2513 2512 C 653 0.00 1248 reject_low 12 ALIGNMENT 0 YS2-11m16.q1k vc_3 714 62 2513 2512 C 653 0.00 1248 reject_low 14 ALIGNMENT 0 YS2-11m16.q1k vc_7 756 831 13562 13561 F 76 0.00 1248 reject_low 17 ALIGNMENT 36 YS2-11m16.q1k vc_5 752 717 1 36 C 36 100.00 1248 reject_low 18 ALIGNMENT 304 YS2-11m16.q1k vc_7 1245 755 2236 2727 C 491 88.80 1248 reject_low 2 ALIGNMENT 141 YS2-11m16.q1k vc_4 755 914 126 287 F 160 96.88 1248 reject_low 8 ALIGNMENT 38 YS2-11m16.q1k vc_7 718 755 63 100 F 38 100.00 1248 reject_low 16 ALIGNMENT 0 YS2-11m17.q1k vc_7 581 92 2728 2727 C 490 0.00 1092 reject_low 6 ALIGNMENT 0 YS2-11m17.q1k vc_4 583 582 5872 6353 F 0 0.00 1092 reject_low 9 ALIGNMENT 51 YS2-11m17.q1k vc_7 793 742 6360 6411 C 52 100.00 1092|1,0 reject_low 10 ALIGNMENT 0 YS2-11m17.q1k vc_5 747 583 5026 5025 C 165 0.00 1092 reject_low 15 ALIGNMENT 0 YS2-11m17.q1k vc_5 92 581 2398 2397 F 490 0.00 1092 reject_low 5 ALIGNMENT 325 YS2-11m17.q1k vc_2 582 1021 2164 2599 F 440 92.73 1092 reject_low 3 ALIGNMENT 41 YS2-11m17.q1k vc_1 582 542 2472 2512 C 41 100.00 1092 reject_low 12 ALIGNMENT 0 YS2-11m17.q1k vc_2 92 581 2164 2163 F 490 0.00 1092 reject_low 3 ALIGNMENT 39 YS2-11m17.q1k vc_5 582 544 5025 5063 C 39 100.00 1092 reject_low 15 ALIGNMENT 486 YS2-11m17.p1k chr04 586 79 840733 841239 C 508 99.21 604 accept_chi 0 ALIGNMENT 0 YS2-11m17.q1k vc_3 747 583 2473 2472 C 165 0.00 1092 reject_low 14 ALIGNMENT 0 YS2-11m17.q1k vc_1 92 581 2531 2530 F 490 0.00 1092 reject_low 2 ALIGNMENT 159 YS2-11m17.q1k vc_4 582 743 126 287 F 162 100.00 1092 reject_low 8 ALIGNMENT 38 YS2-11m17.q1k vc_7 545 582 13525 13562 F 38 100.00 1092 reject_low 17 ALIGNMENT 0 YS2-11m17.q1k vc_2 541 92 2146 2145 C 450 0.00 1092 reject_low 13 ALIGNMENT 0 YS2-11m17.q1k vc_3 541 92 2513 2512 C 450 0.00 1092 reject_low 14 ALIGNMENT 0 YS2-11m17.q1k vc_4 747 671 1447 1446 C 77 0.00 1092 reject_low 11 ALIGNMENT 318 YS2-11m17.q1k vc_4 1021 582 5375 5812 C 440 92.27 1092 reject_low 7 ALIGNMENT 325 YS2-11m17.q1k vc_3 582 1021 2531 2966 F 440 92.73 1092 reject_low 4 ALIGNMENT 0 YS2-11m17.q1k vc_7 92 544 13525 13524 F 453 0.00 1092 reject_low 17 ALIGNMENT 0 YS2-11m17.q1k vc_5 747 580 2 1 C 168 0.00 1092 reject_low 18 ALIGNMENT 41 YS2-11m17.q1k vc_2 582 542 2105 2145 C 41 100.00 1092 reject_low 13 ALIGNMENT 0 YS2-11m17.q1k vc_1 747 583 2473 2472 C 165 0.00 1092 reject_low 12 ALIGNMENT 0 YS2-11m17.q1k chr04 542 747 841243 841242 F 206 0.00 1092 accept_chi 1 ALIGNMENT 325 YS2-11m17.q1k vc_7 1021 582 2292 2727 C 440 92.73 1092 reject_low 6 ALIGNMENT 0 YS2-11m17.q1k vc_5 543 92 5064 5063 C 452 0.00 1092 reject_low 15 ALIGNMENT 115 YS2-11m17.q1k vc_7 1021 792 4947 5172 C 230 85.65 1092|0,1 reject_low 10 ALIGNMENT 0 YS2-11m17.q1k vc_1 541 92 2513 2512 C 450 0.00 1092 reject_low 12 ALIGNMENT 0 YS2-11m17.q1k vc_4 92 541 5831 5830 F 450 0.00 1092 reject_low 9 ALIGNMENT 0 YS2-11m17.q1k vc_4 92 581 126 125 F 490 0.00 1092 reject_low 8 ALIGNMENT 0 YS2-11m17.q1k vc_4 581 92 1535 1534 C 490 0.00 1092 reject_low 11 ALIGNMENT 41 YS2-11m17.q1k vc_3 582 542 2472 2512 C 41 100.00 1092 reject_low 14 ALIGNMENT 325 YS2-11m17.q1k vc_5 582 1021 2398 2833 F 440 92.73 1092 reject_low 5 ALIGNMENT 0 YS2-11m17.q1k vc_7 583 747 100 99 F 165 0.00 1092 reject_low 16 ALIGNMENT 38 YS2-11m17.q1k vc_7 545 582 63 100 F 38 100.00 1092 reject_low 16 ALIGNMENT 0 YS2-11m17.q1k vc_2 747 583 2106 2105 C 165 0.00 1092 reject_low 13 ALIGNMENT 0 YS2-11m17.q1k vc_7 792 793 5172 6360 C 0 0.00 1092 reject_low 10 ALIGNMENT 485 YS2-11m17.q1k chr04 31 541 840733 841243 F 511 98.83 1092 accept_chi 1 ALIGNMENT 0 YS2-11m17.q1k vc_5 543 92 37 36 C 452 0.00 1092 reject_low 18 ALIGNMENT 41 YS2-11m17.q1k vc_4 542 582 5831 5871 F 41 100.00 1092 reject_low 9 ALIGNMENT 0 YS2-11m17.q1k vc_7 92 544 63 62 F 453 0.00 1092 reject_low 16 ALIGNMENT 0 YS2-11m17.q1k vc_4 581 92 5813 5812 C 490 0.00 1092 reject_low 7 ALIGNMENT 0 YS2-11m17.q1k vc_7 741 92 6412 6411 C 650 0.00 1092 reject_low 10 ALIGNMENT 0 YS2-11m17.q1k vc_3 92 581 2531 2530 F 490 0.00 1092 reject_low 4 ALIGNMENT 325 YS2-11m17.q1k vc_1 582 1021 2531 2966 F 440 92.73 1092 reject_low 2 ALIGNMENT 87 YS2-11m17.q1k vc_4 670 582 1446 1534 C 89 100.00 1092 reject_low 11 ALIGNMENT 36 YS2-11m17.q1k vc_5 579 544 1 36 C 36 100.00 1092 reject_low 18 ALIGNMENT 0 YS2-11m17.p1k chr04 604 587 840734 840733 C 18 0.00 604 accept_chi 0 ALIGNMENT 159 YS2-11m17.q1k vc_4 582 743 6353 6514 F 162 100.00 1092|1,0 reject_low 9 ALIGNMENT 0 YS2-11m17.q1k vc_7 583 747 13562 13561 F 165 0.00 1092 reject_low 17 ALIGNMENT 947 YS2-11m18.q1k chr07 34 1124 830145 831235 F 1091 97.07 1124 accept 0 ALIGNMENT 924 YS2-11m21.p1k chr04 1146 62 552997 554084 C 1085 96.13 1189 accept 0 ALIGNMENT 884 YS2-11m21.q1k chr04 38 1076 552471 553493 F 1039 97.02 1157 accept 0 ALIGNMENT 198 YS2-11m22.p1k chr07 359 118 345584 345826 C 242 95.45 983 accept 0 ALIGNMENT 306 YS2-11m22.q1k chr07 27 466 343242 343692 F 440 90.91 904 accept 0 ALIGNMENT 917 YS2-11m23.p1k chr09 1127 31 132505 133599 C 1097 95.35 1140 accept 0 ALIGNMENT 909 YS2-11m23.q1k chr09 36 1017 128844 129815 F 982 98.47 1046 accept 0 ALIGNMENT 973 YS2-11n03.p1k chr16 29 1150 857086 858211 F 1122 96.17 1233 accept 0 ALIGNMENT 1005 YS2-11n03.q1k chr16 1126 31 861362 862462 C 1096 97.54 1127 accept 0 ALIGNMENT 0 YS2-11n04.q1k vc_7 62 219 13525 13524 F 158 0.00 257 reject_low 7 ALIGNMENT 0 YS2-11n04.q1k vc_3 216 62 2513 2512 C 155 0.00 257 reject_low 4 ALIGNMENT 0 YS2-11n04.q1k vc_4 62 216 5831 5830 F 155 0.00 257 reject_low 5 ALIGNMENT 0 YS2-11n04.q1k chr15 257 217 101518 101517 C 41 0.00 257 accept_chi 1 ALIGNMENT 0 YS2-11n04.q1k vc_2 216 62 2146 2145 C 155 0.00 257 reject_low 3 ALIGNMENT 41 YS2-11n04.q1k vc_2 257 217 2105 2145 C 41 100.00 257 reject_low 3 ALIGNMENT 0 YS2-11n04.q1k vc_1 216 62 2513 2512 C 155 0.00 257 reject_low 2 ALIGNMENT 40 YS2-11n04.q1k vc_5 257 215 5025 5067 C 43 97.67 257 reject_low 6 ALIGNMENT 0 YS2-11n04.p1k chr15 214 231 101702 101701 F 18 0.00 231 accept_chi 0 ALIGNMENT 41 YS2-11n04.q1k vc_4 217 257 5831 5871 F 41 100.00 257 reject_low 5 ALIGNMENT 41 YS2-11n04.q1k vc_1 257 217 2472 2512 C 41 100.00 257 reject_low 2 ALIGNMENT 170 YS2-11n04.p1k chr15 29 213 101518 101702 F 185 99.46 231 accept_chi 0 ALIGNMENT 41 YS2-11n04.q1k vc_3 257 217 2472 2512 C 41 100.00 257 reject_low 4 ALIGNMENT 38 YS2-11n04.q1k vc_7 220 257 13525 13562 F 38 100.00 257 reject_low 7 ALIGNMENT 0 YS2-11n04.q1k vc_5 214 62 41 40 C 153 0.00 257 reject_low 8 ALIGNMENT 37 YS2-11n04.q1k vc_5 254 215 1 40 C 40 97.50 257 reject_low 8 ALIGNMENT 0 YS2-11n04.q1k vc_5 214 62 5068 5067 C 153 0.00 257 reject_low 6 ALIGNMENT 170 YS2-11n04.q1k chr15 216 31 101517 101702 C 186 99.46 257 accept_chi 1 ALIGNMENT 679 YS2-11n05.q1k scplasm1 28 1073 1885 2927 F 1046 89.20 1174 accept_chi 1 ALIGNMENT 853 YS2-11n05.p1k chr16 1033 38 399277 400291 C 996 96.18 1182 accept_chi 0 ALIGNMENT 820 YS2-11n07.q1k chr14 1008 38 737641 738601 C 971 96.50 1220 accept 0 ALIGNMENT 979 YS2-11n07.p1k chr14 60 1251 736791 737995 F 1192 94.55 1265 accept 0 ALIGNMENT 578 YS2-11n08.p1k scplasm1 1088 190 2048 2955 C 899 88.77 1230 accept 0 ALIGNMENT 0 YS2-11n08.p1k scplasm1 189 62 2956 2955 C 128 0.00 1230 accept 0 ALIGNMENT 729 YS2-11n08.q1k scplasm1 35 1169 1143 2283 F 1135 88.99 1170 accept 0 ALIGNMENT 415 YS2-11n09.p1k chr10 27 583 19418 19976 F 557 92.28 605 ambiguous_tel 5 ALIGNMENT 36 YS2-11n09.q1k vc_5 627 592 1 36 C 36 100.00 630 reject_low 11 ALIGNMENT 0 YS2-11n09.q1k chr15 630 590 25195 25194 C 41 0.00 630 ambiguous_tel 0 ALIGNMENT 494 YS2-11n09.p1k chr15 27 583 25194 25751 F 557 96.95 605 ambiguous_tel 1 ALIGNMENT 460 YS2-11n09.q1k chr09 589 31 19436 19996 C 559 94.99 630 ambiguous_tel 2 ALIGNMENT 0 YS2-11n09.q1k vc_3 589 62 2513 2512 C 528 0.00 630 reject_low 7 ALIGNMENT 0 YS2-11n09.q1k vc_1 589 62 2513 2512 C 528 0.00 630 reject_low 6 ALIGNMENT 39 YS2-11n09.q1k vc_5 630 592 5025 5063 C 39 100.00 630 reject_low 9 ALIGNMENT 0 YS2-11n09.q1k chr10 630 590 19419 19418 C 41 0.00 630 ambiguous_tel 4 ALIGNMENT 0 YS2-11n09.q1k vc_4 62 589 5831 5830 F 528 0.00 630 reject_low 8 ALIGNMENT 41 YS2-11n09.q1k vc_3 630 590 2472 2512 C 41 100.00 630 reject_low 7 ALIGNMENT 495 YS2-11n09.q1k chr15 589 31 25194 25751 C 559 96.96 630 ambiguous_tel 0 ALIGNMENT 459 YS2-11n09.p1k chr09 27 583 19436 19996 F 557 94.97 605 ambiguous_tel 3 ALIGNMENT 0 YS2-11n09.p1k chr10 584 605 19976 19975 F 22 0.00 605 ambiguous_tel 5 ALIGNMENT 38 YS2-11n09.q1k vc_7 593 630 13525 13562 F 38 100.00 630 reject_low 10 ALIGNMENT 416 YS2-11n09.q1k chr10 589 31 19418 19976 C 559 92.31 630 ambiguous_tel 4 ALIGNMENT 0 YS2-11n09.p1k chr15 584 605 25751 25750 F 22 0.00 605 ambiguous_tel 1 ALIGNMENT 0 YS2-11n09.q1k chr09 630 590 19437 19436 C 41 0.00 630 ambiguous_tel 2 ALIGNMENT 0 YS2-11n09.p1k chr09 584 605 19996 19995 F 22 0.00 605 ambiguous_tel 3 ALIGNMENT 41 YS2-11n09.q1k vc_4 590 630 5831 5871 F 41 100.00 630 reject_low 8 ALIGNMENT 0 YS2-11n09.q1k vc_5 591 62 37 36 C 530 0.00 630 reject_low 11 ALIGNMENT 0 YS2-11n09.q1k vc_5 591 62 5064 5063 C 530 0.00 630 reject_low 9 ALIGNMENT 0 YS2-11n09.q1k vc_7 62 592 13525 13524 F 531 0.00 630 reject_low 10 ALIGNMENT 41 YS2-11n09.q1k vc_1 630 590 2472 2512 C 41 100.00 630 reject_low 6 ALIGNMENT 39 YS2-11n10.q1k vc_5 686 648 5025 5063 C 39 100.00 686 reject_low 6 ALIGNMENT 41 YS2-11n10.q1k vc_4 646 686 5831 5871 F 41 100.00 686 reject_low 5 ALIGNMENT 0 YS2-11n10.q1k vc_5 647 62 5064 5063 C 586 0.00 686 reject_low 6 ALIGNMENT 0 YS2-11n10.q1k vc_4 62 645 5831 5830 F 584 0.00 686 reject_low 5 ALIGNMENT 0 YS2-11n10.q1k vc_5 647 62 37 36 C 586 0.00 686 reject_low 8 ALIGNMENT 600 YS2-11n10.q1k chr07 645 31 14157 14771 C 615 99.84 686 ambiguous_tel 1 ALIGNMENT 41 YS2-11n10.q1k vc_1 686 646 2472 2512 C 41 100.00 686 reject_low 2 ALIGNMENT 600 YS2-11n10.p1k chr07 25 639 14157 14771 F 615 99.84 657 ambiguous_tel 0 ALIGNMENT 41 YS2-11n10.q1k vc_3 686 646 2472 2512 C 41 100.00 686 reject_low 4 ALIGNMENT 0 YS2-11n10.q1k vc_3 645 62 2513 2512 C 584 0.00 686 reject_low 4 ALIGNMENT 41 YS2-11n10.q1k vc_2 686 646 2105 2145 C 41 100.00 686 reject_low 3 ALIGNMENT 38 YS2-11n10.q1k vc_7 649 686 13525 13562 F 38 100.00 686 reject_low 7 ALIGNMENT 0 YS2-11n10.q1k vc_1 645 62 2513 2512 C 584 0.00 686 reject_low 2 ALIGNMENT 0 YS2-11n10.q1k vc_7 62 648 13525 13524 F 587 0.00 686 reject_low 7 ALIGNMENT 36 YS2-11n10.q1k vc_5 683 648 1 36 C 36 100.00 686 reject_low 8 ALIGNMENT 0 YS2-11n10.p1k chr07 640 657 14771 14770 F 18 0.00 657 ambiguous_tel 0 ALIGNMENT 0 YS2-11n10.q1k chr07 686 646 14158 14157 C 41 0.00 686 ambiguous_tel 1 ALIGNMENT 0 YS2-11n10.q1k vc_2 645 62 2146 2145 C 584 0.00 686 reject_low 3 ALIGNMENT 985 YS2-11n11.q1k chr12 34 1187 333188 334338 F 1154 96.19 1187 accept 0 ALIGNMENT 995 YS2-11n11.p1k chr12 1223 54 334997 336175 C 1170 95.47 1251 accept 0 ALIGNMENT 36 YS2-11n13.q1k vc_5 517 482 1 36 C 36 100.00 520 reject_low 7 ALIGNMENT 39 YS2-11n13.q1k vc_5 520 482 5025 5063 C 39 100.00 520 reject_low 5 ALIGNMENT 41 YS2-11n13.q1k vc_3 520 480 2472 2512 C 41 100.00 520 reject_low 3 ALIGNMENT 0 YS2-11n13.q1k chr13 520 480 105083 105082 C 41 0.00 520 accept_chi 0 ALIGNMENT 0 YS2-11n13.q1k vc_5 481 62 5064 5063 C 420 0.00 520 reject_low 5 ALIGNMENT 0 YS2-11n13.q1k vc_7 62 482 13525 13524 F 421 0.00 520 reject_low 6 ALIGNMENT 0 YS2-11n13.p1k chr13 482 500 105533 105532 F 19 0.00 500 accept_chi 1 ALIGNMENT 41 YS2-11n13.q1k vc_1 520 480 2472 2512 C 41 100.00 520 reject_low 2 ALIGNMENT 0 YS2-11n13.q1k vc_1 479 62 2513 2512 C 418 0.00 520 reject_low 2 ALIGNMENT 0 YS2-11n13.q1k vc_3 479 62 2513 2512 C 418 0.00 520 reject_low 3 ALIGNMENT 418 YS2-11n13.p1k chr13 29 481 105082 105533 F 453 98.68 500 accept_chi 1 ALIGNMENT 41 YS2-11n13.q1k vc_4 480 520 5831 5871 F 41 100.00 520 reject_low 4 ALIGNMENT 0 YS2-11n13.q1k vc_5 481 62 37 36 C 420 0.00 520 reject_low 7 ALIGNMENT 0 YS2-11n13.q1k vc_4 62 479 5831 5830 F 418 0.00 520 reject_low 4 ALIGNMENT 38 YS2-11n13.q1k vc_7 483 520 13525 13562 F 38 100.00 520 reject_low 6 ALIGNMENT 422 YS2-11n13.q1k chr13 479 28 105082 105533 C 452 98.89 520 accept_chi 0 ALIGNMENT 0 YS2-11n14.p1k chr01 62 500 113291 113290 F 439 0.00 1214 reject_low 6 ALIGNMENT 20 YS2-11n14.p1k chr14 993 960 604229 604262 C 34 91.18 1214 reject_low 11 ALIGNMENT 0 YS2-11n14.p1k chr14 959 62 70057 70056 C 898 0.00 1214 reject_low 12 ALIGNMENT 25 YS2-11n14.p1k chr04 538 501 747503 747540 C 38 94.74 1214 reject_low 1 ALIGNMENT 0 YS2-11n14.p1k chr04 950 62 747548 747547 C 889 0.00 1214 reject_low 3 ALIGNMENT 893 YS2-11n14.p1k chr09 1051 28 399944 400959 C 1024 96.48 1214 accept 0 ALIGNMENT 0 YS2-11n14.p1k chr12 501 62 556380 556379 C 440 0.00 1214 reject_low 4 ALIGNMENT 0 YS2-11n14.p1k chr12 877 539 556344 556343 C 339 0.00 1214 reject_low 4 ALIGNMENT 22 YS2-11n14.p1k chr09 997 960 400446 400483 C 38 89.47 1214 reject_low 9 ALIGNMENT 0 YS2-11n14.p1k chr05 62 959 377450 377449 F 898 0.00 1214 reject_low 10 ALIGNMENT 24 YS2-11n14.p1k chr04 1004 951 747495 747547 C 54 85.19 1214 reject_low 3 ALIGNMENT 0 YS2-11n14.p1k chr05 535 877 377481 377480 F 343 0.00 1214 reject_low 7 ALIGNMENT 0 YS2-11n14.p1k chr13 539 877 588635 588634 F 339 0.00 1214 reject_low 2 ALIGNMENT 0 YS2-11n14.p1k chr16 959 62 117219 117218 C 898 0.00 1214 reject_low 8 ALIGNMENT 969 YS2-11n14.q1k chr09 35 1137 395966 397071 F 1103 96.92 1144 accept 0 ALIGNMENT 0 YS2-11n14.p1k chr04 500 62 747541 747540 C 439 0.00 1214 reject_low 1 ALIGNMENT 22 YS2-11n14.p1k chr12 538 502 556343 556379 C 37 91.89 1214 reject_low 4 ALIGNMENT 0 YS2-11n14.p1k chr12 959 62 556379 556378 C 898 0.00 1214 reject_low 5 ALIGNMENT 0 YS2-11n14.p1k chr05 62 500 377448 377447 F 439 0.00 1214 reject_low 7 ALIGNMENT 0 YS2-11n14.p1k chr14 959 62 604263 604262 C 898 0.00 1214 reject_low 11 ALIGNMENT 25 YS2-11n14.p1k chr12 1007 960 556332 556378 C 48 87.50 1214 reject_low 5 ALIGNMENT 24 YS2-11n14.p1k chr16 994 960 117184 117218 C 35 94.29 1214 reject_low 8 ALIGNMENT 20 YS2-11n14.p1k chr14 988 960 70028 70056 C 29 96.55 1214 reject_low 12 ALIGNMENT 23 YS2-11n14.p1k chr01 501 529 113291 113319 F 29 100.00 1214 reject_low 6 ALIGNMENT 0 YS2-11n14.p1k chr01 530 877 113319 113318 F 348 0.00 1214 reject_low 6 ALIGNMENT 0 YS2-11n14.p1k chr13 62 500 588598 588597 F 439 0.00 1214 reject_low 2 ALIGNMENT 0 YS2-11n14.p1k chr04 877 539 747504 747503 C 339 0.00 1214 reject_low 1 ALIGNMENT 20 YS2-11n14.p1k chr05 501 534 377448 377481 F 34 94.12 1214 reject_low 7 ALIGNMENT 21 YS2-11n14.p1k chr05 960 991 377450 377481 F 32 93.75 1214 reject_low 10 ALIGNMENT 25 YS2-11n14.p1k chr13 501 538 588598 588635 F 38 94.74 1214 reject_low 2 ALIGNMENT 0 YS2-11n14.p1k chr09 959 62 400484 400483 C 898 0.00 1214 reject_low 9 ALIGNMENT 152 YS2-11n15.p1k chrm 154 661 41543 42059 F 508 81.89 1243 reject_low 1 ALIGNMENT 0 YS2-11n15.p1k chrm 662 905 42059 42058 F 244 0.00 1243 reject_low 1 ALIGNMENT 844 YS2-11n15.p1k chrm 30 1150 21109 22237 F 1121 96.34 1243 accept 0 ALIGNMENT 802 YS2-11n15.q1k chrm 1204 32 22385 23548 C 1173 95.57 1270 accept 0 ALIGNMENT 0 YS2-11n15.p1k chrm 62 153 41543 41542 F 92 0.00 1243 reject_low 1 ALIGNMENT 1009 YS2-11n16.p1k chr02 29 1151 201637 202750 F 1123 97.06 1275 accept 0 ALIGNMENT 976 YS2-11n16.q1k chr02 1186 28 202989 204165 C 1159 95.08 1217 accept 0 ALIGNMENT 907 YS2-11n17.q1k chr06 33 1123 79563 80654 F 1091 95.23 1126 accept 0 ALIGNMENT 0 YS2-11n18.p1k chr04 357 339 1309926 1309925 C 19 0.00 357 accept_chi 0 ALIGNMENT 36 YS2-11n18.q1k vc_5 389 354 1 36 C 36 100.00 392 reject_low 8 ALIGNMENT 38 YS2-11n18.q1k vc_7 355 392 13525 13562 F 38 100.00 392 reject_low 7 ALIGNMENT 41 YS2-11n18.q1k vc_3 392 352 2472 2512 C 41 100.00 392 reject_low 4 ALIGNMENT 0 YS2-11n18.q1k vc_2 351 62 2146 2145 C 290 0.00 392 reject_low 3 ALIGNMENT 39 YS2-11n18.q1k vc_5 392 354 5025 5063 C 39 100.00 392 reject_low 6 ALIGNMENT 0 YS2-11n18.q1k chr04 352 392 1310237 1310236 F 41 0.00 392 accept_chi 1 ALIGNMENT 0 YS2-11n18.q1k vc_7 62 354 13525 13524 F 293 0.00 392 reject_low 7 ALIGNMENT 0 YS2-11n18.q1k vc_5 353 62 37 36 C 292 0.00 392 reject_low 8 ALIGNMENT 0 YS2-11n18.q1k vc_1 351 62 2513 2512 C 290 0.00 392 reject_low 2 ALIGNMENT 41 YS2-11n18.q1k vc_4 352 392 5831 5871 F 41 100.00 392 reject_low 5 ALIGNMENT 301 YS2-11n18.q1k chr04 39 351 1309925 1310237 F 313 99.68 392 accept_chi 1 ALIGNMENT 41 YS2-11n18.q1k vc_2 392 352 2105 2145 C 41 100.00 392 reject_low 3 ALIGNMENT 0 YS2-11n18.q1k vc_3 351 62 2513 2512 C 290 0.00 392 reject_low 4 ALIGNMENT 41 YS2-11n18.q1k vc_1 392 352 2472 2512 C 41 100.00 392 reject_low 2 ALIGNMENT 0 YS2-11n18.q1k vc_4 62 351 5831 5830 F 290 0.00 392 reject_low 5 ALIGNMENT 301 YS2-11n18.p1k chr04 338 26 1309925 1310237 C 313 99.68 357 accept_chi 0 ALIGNMENT 0 YS2-11n18.q1k vc_5 353 62 5064 5063 C 292 0.00 392 reject_low 6 ALIGNMENT 986 YS2-11n19.p1k chr04 34 1154 1050983 1052109 F 1121 96.34 1205 accept 0 ALIGNMENT 923 YS2-11n19.q1k chr04 1123 24 1051960 1053054 C 1100 96.55 1151 accept 0 ALIGNMENT 962 YS2-11n20.q1k chr12 1071 33 466286 467315 C 1039 98.56 1169 reject_low 1 ALIGNMENT 973 YS2-11n20.p1k chr12 179 1344 456126 457296 F 1166 94.34 1352 accept 0 ALIGNMENT 962 YS2-11n20.q1k chr12 1071 33 457149 458178 C 1039 98.56 1169 accept 0 ALIGNMENT 946 YS2-11n20.p1k chr12 179 1243 465263 466326 F 1065 95.96 1352 reject_low 1 ALIGNMENT 979 YS2-11n22.p1k chr13 1119 24 915547 916651 C 1096 97.26 1209 accept 0 ALIGNMENT 1006 YS2-11n22.q1k chr13 27 1169 914779 915916 F 1143 96.94 1169 accept 0 ALIGNMENT 826 YS2-11n23.q1k chr14 1002 37 348850 349807 C 966 96.58 1093 accept 0 ALIGNMENT 947 YS2-11n23.p1k chr14 26 1115 345779 346864 F 1090 96.51 1182 accept 0 ALIGNMENT 40 YS2-11o01.q1k vc_5 324 282 5025 5067 C 43 97.67 324 reject_low 5 ALIGNMENT 41 YS2-11o01.q1k vc_1 324 284 2472 2512 C 41 100.00 324 reject_low 2 ALIGNMENT 0 YS2-11o01.p1k chr10 310 294 650190 650189 C 17 0.00 310 accept_chi 0 ALIGNMENT 37 YS2-11o01.q1k vc_5 321 282 1 40 C 40 97.50 324 reject_low 7 ALIGNMENT 237 YS2-11o01.p1k chr10 293 35 650189 650446 C 259 98.46 310 accept_chi 0 ALIGNMENT 0 YS2-11o01.q1k chr10 285 324 650446 650445 F 40 0.00 324 accept_chi 1 ALIGNMENT 41 YS2-11o01.q1k vc_3 324 284 2472 2512 C 41 100.00 324 reject_low 3 ALIGNMENT 0 YS2-11o01.q1k vc_7 92 286 13525 13524 F 195 0.00 324 reject_low 6 ALIGNMENT 238 YS2-11o01.q1k chr10 27 284 650189 650446 F 258 98.84 324 accept_chi 1 ALIGNMENT 0 YS2-11o01.q1k vc_5 281 92 41 40 C 190 0.00 324 reject_low 7 ALIGNMENT 0 YS2-11o01.q1k vc_1 283 92 2513 2512 C 192 0.00 324 reject_low 2 ALIGNMENT 0 YS2-11o01.q1k vc_4 92 283 5831 5830 F 192 0.00 324 reject_low 4 ALIGNMENT 0 YS2-11o01.q1k vc_3 283 92 2513 2512 C 192 0.00 324 reject_low 3 ALIGNMENT 41 YS2-11o01.q1k vc_4 284 324 5831 5871 F 41 100.00 324 reject_low 4 ALIGNMENT 0 YS2-11o01.q1k vc_5 281 92 5068 5067 C 190 0.00 324 reject_low 5 ALIGNMENT 38 YS2-11o01.q1k vc_7 287 324 13525 13562 F 38 100.00 324 reject_low 6 ALIGNMENT 974 YS2-11o03.p1k chr07 30 1127 764966 766070 F 1098 96.99 1158 accept 0 ALIGNMENT 0 YS2-11o03.p1k chr16 248 895 839317 839316 F 648 0.00 1158 reject_low 1 ALIGNMENT 935 YS2-11o03.q1k chr07 1096 32 767128 768183 C 1065 97.56 1104 accept 0 ALIGNMENT 140 YS2-11o03.p1k chr16 30 247 839101 839317 F 218 88.99 1158 reject_low 1 ALIGNMENT 1018 YS2-11o04.q1k chr05 34 1122 302178 303269 F 1089 98.71 1123 accept 0 ALIGNMENT 956 YS2-11o04.p1k chr05 1193 33 305287 306444 C 1161 95.18 1217 accept 0 ALIGNMENT 573 YS2-11o05.q1k chr07 713 26 921006 921689 C 688 95.64 1236 accept 0 ALIGNMENT 392 YS2-11o05.q1k chr12 586 44 242685 243227 C 543 91.16 1236 reject_low 1 ALIGNMENT 854 YS2-11o05.p1k chr07 33 1115 916990 918086 F 1083 93.81 1178 accept 0 ALIGNMENT 0 YS2-11o07.p1k chr08 302 865 365426 365425 F 564 0.00 1177 reject_low 1 ALIGNMENT 929 YS2-11o07.p1k chr12 24 1117 583383 584480 F 1094 96.16 1177 accept 0 ALIGNMENT 889 YS2-11o07.q1k chr12 1074 53 583782 584797 C 1022 97.55 1077 accept 0 ALIGNMENT 0 YS2-11o07.p1k chr08 62 274 365400 365399 F 213 0.00 1177 reject_low 1 ALIGNMENT 20 YS2-11o07.p1k chr08 275 301 365400 365426 F 27 92.59 1177 reject_low 1 ALIGNMENT 908 YS2-11o08.q1k chr02 1056 28 568814 569836 C 1029 97.86 1065 accept 0 ALIGNMENT 965 YS2-11o08.p1k chr02 27 1144 567364 568478 F 1118 96.87 1258 accept 0 ALIGNMENT 916 YS2-11o09.p1k chr16 1046 35 719932 720940 C 1012 97.73 1178 accept 0 ALIGNMENT 950 YS2-11o09.q1k chr16 32 1145 718555 719672 F 1114 96.50 1146 accept 0 ALIGNMENT 967 YS2-11o10.q1k chr13 37 1209 736056 737220 F 1173 95.91 1210 accept 0 ALIGNMENT 0 YS2-11o11.p1k chr13 321 339 565488 565487 F 19 0.00 339 accept 0 ALIGNMENT 264 YS2-11o11.p1k chr13 37 320 565205 565488 F 284 98.94 339 accept 0 ALIGNMENT 670 YS2-11o12.q1k chr12 879 39 805507 806345 C 841 94.17 1241 accept 0 ALIGNMENT 984 YS2-11o12.p1k chr12 28 1178 804771 805927 F 1151 95.48 1216 accept 0 ALIGNMENT 954 YS2-11o14.p1k chr02 26 1221 567364 568551 F 1196 94.82 1243 accept 0 ALIGNMENT 976 YS2-11o14.q1k chr02 1137 31 568721 569836 C 1107 97.02 1137 accept 0 ALIGNMENT 932 YS2-11o16.q1k chr11 32 1176 531007 532135 F 1145 95.72 1179 accept 0 ALIGNMENT 928 YS2-11o18.q1k chr15 31 1029 271431 272430 F 999 98.60 1034 accept 0 ALIGNMENT 0 YS2-11o19.p1k chrm 126 368 83048 83047 F 243 0.00 1162 reject_low 16 ALIGNMENT 0 YS2-11o19.p1k chrm 366 126 2802 2801 C 241 0.00 1162 reject_low 9 ALIGNMENT 0 YS2-11o19.p1k chrm 126 358 69038 69037 F 233 0.00 1162 reject_low 14 ALIGNMENT 42 YS2-11o19.p1k chrm 366 416 3050 3101 F 51 96.08 1162 reject_low 20 ALIGNMENT 753 YS2-11o19.p1k chrm 1145 70 46743 47828 C 1076 96.38 1162 accept 0 ALIGNMENT 299 YS2-11o19.p1k chrm 473 66 47418 47832 C 408 96.08 1162 reject_low 1 ALIGNMENT 0 YS2-11o19.p1k chrm 937 180 49090 49089 C 758 0.00 1162 reject_low 8 ALIGNMENT 0 YS2-11o19.q1k chrm 92 162 9020 9019 F 71 0.00 1118 reject_low 3 ALIGNMENT 55 YS2-11o19.p1k chrm 361 453 8223 8313 F 93 89.25 1162 reject_low 4 ALIGNMENT 0 YS2-11o19.p1k chrm 126 368 2089 2088 F 243 0.00 1162 reject_low 17 ALIGNMENT 37 YS2-11o19.q1k chrm 170 216 10389 10434 F 47 95.74 1118 reject_low 11 ALIGNMENT 44 YS2-11o19.q1k chrm 163 216 9020 9073 F 54 94.44 1118 reject_low 3 ALIGNMENT 36 YS2-11o19.p1k chrm 123 217 49078 49175 F 95 83.16 1162 reject_low 7 ALIGNMENT 0 YS2-11o19.p1k chrm 365 126 52384 52383 C 240 0.00 1162 reject_low 2 ALIGNMENT 0 YS2-11o19.q1k chrm 217 803 9073 9072 F 587 0.00 1118 reject_low 3 ALIGNMENT 0 YS2-11o19.p1k chrm 416 937 69094 69093 F 522 0.00 1162 reject_low 14 ALIGNMENT 43 YS2-11o19.p1k chrm 417 366 52331 52383 C 52 96.15 1162 reject_low 2 ALIGNMENT 58 YS2-11o19.p1k chrm 452 367 2716 2801 C 86 91.86 1162 reject_low 9 ALIGNMENT 447 YS2-11o19.q1k chrm 307 978 46483 47148 F 672 96.28 1118|9,0 accept 0 ALIGNMENT 0 YS2-11o19.q1k chrm 316 315 46456 46491 F 0 0.00 1118 accept 0 ALIGNMENT 0 YS2-11o19.q1k chrm 803 217 9491 9490 C 587 0.00 1118 reject_low 4 ALIGNMENT 0 YS2-11o19.p1k chrm 417 937 3101 3100 F 521 0.00 1162 reject_low 20 ALIGNMENT 0 YS2-11o19.p1k chrm 126 338 65740 65739 F 213 0.00 1162 reject_low 13 ALIGNMENT 0 YS2-11o19.q1k chrm 253 803 48176 48175 F 551 0.00 1118 reject_low 2 ALIGNMENT 0 YS2-11o19.p1k chrm 259 126 9646 9645 C 134 0.00 1162 reject_low 3 ALIGNMENT 47 YS2-11o19.p1k chrm 365 417 69433 69486 F 53 98.11 1162 reject_low 15 ALIGNMENT 0 YS2-11o19.q1k chrm 168 92 9538 9537 C 77 0.00 1118 reject_low 4 ALIGNMENT 0 YS2-11o19.q1k chrm 92 157 66810 66809 F 66 0.00 1118 reject_low 5 ALIGNMENT 0 YS2-11o19.p1k chrm 937 418 52332 52331 C 520 0.00 1162 reject_low 2 ALIGNMENT 36 YS2-11o19.p1k chrm 417 260 9489 9645 C 158 81.01 1162 reject_low 3 ALIGNMENT 0 YS2-11o19.p1k chrm 937 418 71214 71213 C 520 0.00 1162 reject_low 5,6 ALIGNMENT 43 YS2-11o19.p1k chrm 369 416 2089 2136 F 48 97.92 1162 reject_low 17 ALIGNMENT 0 YS2-11o19.q1k chrm 218 803 66869 66868 F 586 0.00 1118 reject_low 5 ALIGNMENT 0 YS2-11o19.p1k chrm 417 937 62903 62902 F 521 0.00 1162 reject_low 19 ALIGNMENT 44 YS2-11o19.q1k chrm 158 217 66810 66869 F 60 91.67 1118 reject_low 5 ALIGNMENT 51 YS2-11o19.p1k chrm 359 415 69038 69094 F 57 96.49 1162 reject_low 14 ALIGNMENT 0 YS2-11o19.p1k chrm 126 365 3050 3049 F 240 0.00 1162 reject_low 20 ALIGNMENT 47 YS2-11o19.p1k chrm 369 417 83048 83096 F 49 100.00 1162 reject_low 16 ALIGNMENT 0 YS2-11o19.p1k chrm 126 317 8977 8976 F 192 0.00 1162 reject_low 10 ALIGNMENT 0 YS2-11o19.p1k chrm 126 360 8223 8222 F 235 0.00 1162 reject_low 4 ALIGNMENT 0 YS2-11o19.q1k chrm 217 803 10434 10433 F 587 0.00 1118 reject_low 11 ALIGNMENT 0 YS2-11o19.p1k chrm 417 937 65813 65812 F 521 0.00 1162 reject_low 13 ALIGNMENT 0 YS2-11o19.p1k chrm 126 370 62858 62857 F 245 0.00 1162 reject_low 19 ALIGNMENT 0 YS2-11o19.p1k chrm 418 937 69486 69485 F 520 0.00 1162 reject_low 15 ALIGNMENT 0 YS2-11o19.p1k chrm 218 937 49175 49174 F 720 0.00 1162 reject_low 7 ALIGNMENT 0 YS2-11o19.p1k chrm 417 937 46356 46355 F 521 0.00 1162 reject_low 18 ALIGNMENT 0 YS2-11o19.p1k chrm 126 341 11475 11474 F 216 0.00 1162 reject_low 12 ALIGNMENT 0 YS2-11o19.q1k chrm 92 169 10389 10388 F 78 0.00 1118 reject_low 11 ALIGNMENT 43 YS2-11o19.q1k chrm 216 169 9490 9537 C 48 97.92 1118 reject_low 4 ALIGNMENT 0 YS2-11o19.p1k chrm 126 368 46309 46308 F 243 0.00 1162 reject_low 18 ALIGNMENT 0 YS2-11o19.p1k chrm 937 474 47419 47418 C 464 0.00 1162 reject_low 1 ALIGNMENT 0 YS2-11o19.p1k chrm 937 453 2717 2716 C 485 0.00 1162 reject_low 9 ALIGNMENT 0 YS2-11o19.p1k chrm 417 937 2136 2135 F 521 0.00 1162 reject_low 17 ALIGNMENT 0 YS2-11o19.p1k chrm 367 126 71263 71262 C 242 0.00 1162 reject_low 5,6 ALIGNMENT 0 YS2-11o19.q1k chrm 92 172 62860 62859 F 81 0.00 1118 reject_low 6 ALIGNMENT 0 YS2-11o19.p1k chrm 126 364 69433 69432 F 239 0.00 1162 reject_low 15 ALIGNMENT 0 YS2-11o19.p1k chrm 937 418 9490 9489 C 520 0.00 1162 reject_low 3 ALIGNMENT 42 YS2-11o19.p1k chrm 179 134 49089 49134 C 46 100.00 1162 reject_low 8 ALIGNMENT 0 YS2-11o19.p1k chrm 454 937 8313 8312 F 484 0.00 1162 reject_low 4 ALIGNMENT 63 YS2-11o19.q1k chrm 169 252 48096 48176 F 84 94.05 1118 reject_low 2 ALIGNMENT 0 YS2-11o19.p1k chrm 418 937 9074 9073 F 520 0.00 1162 reject_low 10 ALIGNMENT 0 YS2-11o19.p1k chrm 418 937 11548 11547 F 520 0.00 1162 reject_low 12 ALIGNMENT 0 YS2-11o19.q1k chrm 222 803 62908 62907 F 582 0.00 1118 reject_low 6 ALIGNMENT 0 YS2-11o19.q1k chrm 92 168 48096 48095 F 77 0.00 1118 reject_low 2 ALIGNMENT 43 YS2-11o19.p1k chrm 369 416 46309 46356 F 48 97.92 1162 reject_low 18 ALIGNMENT 44 YS2-11o19.p1k chrm 339 416 65740 65813 F 78 88.46 1162 reject_low 13 ALIGNMENT 48 YS2-11o19.p1k chrm 417 368 71213 71262 C 50 100.00 1162 reject_low 5,6 ALIGNMENT 53 YS2-11o19.p1k chrm 318 417 8977 9074 F 100 88.00 1162 reject_low 10 ALIGNMENT 217 YS2-11o19.q1k chrm 30 324 46171 46464 F 295 97.63 1118|0,9 accept 0 ALIGNMENT 48 YS2-11o19.q1k chrm 173 221 62860 62908 F 49 100.00 1118 reject_low 6 ALIGNMENT 54 YS2-11o19.p1k chrm 342 417 11475 11548 F 76 92.11 1162 reject_low 12 ALIGNMENT 43 YS2-11o19.p1k chrm 371 416 62858 62903 F 46 100.00 1162 reject_low 19 ALIGNMENT 0 YS2-11o19.p1k chrm 418 937 83096 83095 F 520 0.00 1162 reject_low 16 ALIGNMENT 938 YS2-11o20.q1k chr12 1098 29 413086 414150 C 1070 97.20 1098 accept 0 ALIGNMENT 938 YS2-11o21.q1k chr08 33 1112 268381 269459 F 1080 96.48 1115 accept 0 ALIGNMENT 0 YS2-11o22.q1k vc_5 350 62 37 36 C 289 0.00 389 reject_low 6 ALIGNMENT 39 YS2-11o22.q1k vc_5 389 351 5025 5063 C 39 100.00 389 reject_low 4 ALIGNMENT 38 YS2-11o22.q1k vc_7 352 389 13525 13562 F 38 100.00 389 reject_low 5 ALIGNMENT 36 YS2-11o22.q1k vc_5 386 351 1 36 C 36 100.00 389 reject_low 6 ALIGNMENT 0 YS2-11o22.q1k vc_5 350 62 5064 5063 C 289 0.00 389 reject_low 4 ALIGNMENT 0 YS2-11o22.q1k vc_4 62 349 5832 5831 F 288 0.00 389 reject_low 3 ALIGNMENT 40 YS2-11o22.q1k vc_1 389 350 2472 2511 C 40 100.00 389 reject_low 1 ALIGNMENT 0 YS2-11o22.q1k vc_7 62 351 13525 13524 F 290 0.00 389 reject_low 5 ALIGNMENT 0 YS2-11o22.q1k vc_3 349 62 2512 2511 C 288 0.00 389 reject_low 2 ALIGNMENT 269 YS2-11o22.q1k chr13 350 35 765944 766260 C 316 97.15 389 accept 0 ALIGNMENT 0 YS2-11o22.q1k vc_1 349 62 2512 2511 C 288 0.00 389 reject_low 1 ALIGNMENT 0 YS2-11o22.q1k chr13 389 351 765945 765944 C 39 0.00 389 accept 0 ALIGNMENT 40 YS2-11o22.q1k vc_4 350 389 5832 5871 F 40 100.00 389 reject_low 3 ALIGNMENT 40 YS2-11o22.q1k vc_3 389 350 2472 2511 C 40 100.00 389 reject_low 2 ALIGNMENT 883 YS2-11o23.q1k chr12 1032 33 460645 461652 C 1000 97.10 1053 accept 0 ALIGNMENT 0 YS2-11o23.q1k chr12 788 762 489755 489754 C 27 0.00 1053 reject_low 3 ALIGNMENT 976 YS2-11o23.p1k chr12 32 1100 465530 466596 F 1069 97.57 1111 reject_low 1 ALIGNMENT 976 YS2-11o23.p1k chr12 32 1100 456393 457459 F 1069 97.57 1111 accept 0 ALIGNMENT 883 YS2-11o23.q1k chr12 1032 33 451508 452515 C 1000 97.10 1053 reject_low 2 ALIGNMENT 693 YS2-11o23.q1k chr12 761 33 489754 490483 C 729 98.63 1053 reject_low 3 ALIGNMENT 709 YS2-11o24.q1k chr12 27 861 460752 461579 F 835 96.05 1186 accept_chi 2 ALIGNMENT 537 YS2-11o24.q1k chr12 198 861 489754 490410 F 664 94.58 1186 reject_low 3 ALIGNMENT 0 YS2-11o24.q1k chr12 62 197 489754 489753 F 136 0.00 1186 reject_low 3 ALIGNMENT 1004 YS2-11o24.p1k chr12 38 1155 983721 984840 F 1118 97.76 1155 accept_chi 0 ALIGNMENT 709 YS2-11o24.q1k chr12 27 861 451615 452442 F 835 96.05 1186 accept_chi 1 ALIGNMENT 0 YS2-11p01.p1k chr06 62 1064 210598 210597 F 1003 0.00 1168 reject_low 1 ALIGNMENT 898 YS2-11p01.p1k chr06 1165 32 167423 168588 C 1134 94.62 1168 accept 0 ALIGNMENT 60 YS2-11p01.p1k chr06 1065 1165 210598 210702 F 101 88.12 1168 reject_low 1 ALIGNMENT 1021 YS2-11p01.q1k chr06 39 1133 163797 164891 F 1095 98.36 1133 accept 0 ALIGNMENT 1019 YS2-11p02.p1k chr04 1165 38 379748 380877 C 1128 97.78 1165 accept 0 ALIGNMENT 959 YS2-11p02.q1k chr04 30 1119 374595 375671 F 1090 97.98 1124 accept 0 ALIGNMENT 165 YS2-11p03.p1k chr07 252 29 437469 437692 C 224 91.96 1203 reject_low 1 ALIGNMENT 0 YS2-11p03.p1k chr07 880 253 437470 437469 C 628 0.00 1203 reject_low 1 ALIGNMENT 986 YS2-11p03.p1k chr07 1203 31 786352 787535 C 1173 95.82 1203 accept 0 ALIGNMENT 938 YS2-11p03.q1k chr07 32 1109 781957 783022 F 1078 97.31 1141 accept 0 ALIGNMENT 0 YS2-11p05.p1k chr12 412 430 456437 456436 F 19 0.00 430 accept 0 ALIGNMENT 378 YS2-11p05.p1k chr12 28 411 465191 465574 F 384 99.48 430 accept 1 ALIGNMENT 0 YS2-11p05.p1k chr12 412 430 465574 465573 F 19 0.00 430 accept 1 ALIGNMENT 378 YS2-11p05.p1k chr12 28 411 456054 456437 F 384 99.48 430 accept 0 ALIGNMENT 40 YS2-11p06.p1k chr03 349 81 119 387 C 269 89.96 582 reject_low 24 ALIGNMENT 237 YS2-11p06.p1k chr04 258 565 1525355 1525662 F 308 95.45 582 reject_low 8 ALIGNMENT 0 YS2-11p06.p1k chr13 232 582 924428 924427 F 351 0.00 582 reject_low 20 ALIGNMENT 0 YS2-11p06.q1k chr04 389 340 1525356 1525355 C 50 0.00 1321 reject_low 6 ALIGNMENT 0 YS2-11p06.p1k chr08 566 582 557198 557197 F 17 0.00 582 reject_low 5 ALIGNMENT 23 YS2-11p06.p1k chr12 81 220 1065007 1065147 F 140 89.29 582 reject_low 1,23 ALIGNMENT 0 YS2-11p06.p1k chr12 221 582 1065147 1065146 F 362 0.00 582 reject_low 1 ALIGNMENT 0 YS2-11p06.p1k chr07 582 136 3 2 C 447 0.00 582 reject_low 21 ALIGNMENT 200 YS2-11p06.q1k chr15 243 32 1084616 1084827 C 212 98.58 1321 reject_low 15 ALIGNMENT 0 YS2-11p06.p1k chr12 178 62 11358 11357 C 117 0.00 582 accept_tel 0 ALIGNMENT 0 YS2-11p06.p1k chr04 62 257 1525355 1525354 F 196 0.00 582 reject_low 8 ALIGNMENT 223 YS2-11p06.q1k chr13 32 291 5325 5588 F 260 96.92 1321 reject_low 10 ALIGNMENT 244 YS2-11p06.q1k chr12 32 400 10984 11341 F 369 93.77 1321 reject_low 2 ALIGNMENT 200 YS2-11p06.q1k chr07 243 32 1084352 1084563 C 212 98.58 1321 reject_low 14 ALIGNMENT 217 YS2-11p06.p1k chr12 565 286 5449 5722 C 280 95.36 582 reject_low 13 ALIGNMENT 0 YS2-11p06.q1k chr10 196 389 6931 6930 F 194 0.00 1321 reject_low 18 ALIGNMENT 21 YS2-11p06.p1k chr03 77 47 369 399 C 31 93.55 582 reject_low 24 ALIGNMENT 0 YS2-11p06.p1k chr14 273 62 6690 6689 C 212 0.00 582 reject_low 11 ALIGNMENT 0 YS2-11p06.p1k chr10 582 566 6777 6776 C 17 0.00 582 reject_low 17 ALIGNMENT 0 YS2-11p06.p1k chr13 582 566 5326 5325 C 17 0.00 582 reject_low 12 ALIGNMENT 0 YS2-11p06.p1k chr10 401 62 6932 6931 C 340 0.00 582 reject_low 17 ALIGNMENT 0 YS2-11p06.p1k chr03 80 78 388 368 C 3 0.00 582 reject_low 24 ALIGNMENT 0 YS2-11p06.q1k chr07 389 244 1084353 1084352 C 146 0.00 1321 reject_low 14 ALIGNMENT 222 YS2-11p06.p1k chr14 565 274 6405 6689 C 292 95.21 582 reject_low 11 ALIGNMENT 185 YS2-11p06.q1k chr12 379 32 1065027 1065357 C 348 90.23 1321 reject_low 1 ALIGNMENT 0 YS2-11p06.p1k chr01 202 582 230204 230203 F 381 0.00 582 reject_low 22 ALIGNMENT 0 YS2-11p06.p1k chr08 62 202 556836 556835 F 141 0.00 582 reject_low 5 ALIGNMENT 0 YS2-11p06.q1k chr14 324 389 6689 6688 F 66 0.00 1321 reject_low 9 ALIGNMENT 247 YS2-11p06.q1k chr08 394 32 556836 557198 C 363 93.66 1321 reject_low 3 ALIGNMENT 203 YS2-11p06.p1k chr12 344 565 1071642 1071863 F 222 97.75 582 reject_low 23 ALIGNMENT 0 YS2-11p06.p1k chr14 582 566 6406 6405 C 17 0.00 582 reject_low 11 ALIGNMENT 0 YS2-11p06.q1k chr12 312 389 5722 5721 F 78 0.00 1321 accept_tel 0 ALIGNMENT 0 YS2-11p06.q1k chr15 389 244 1084617 1084616 C 146 0.00 1321 reject_low 15 ALIGNMENT 0 YS2-11p06.q1k chr13 292 389 5588 5587 F 98 0.00 1321 reject_low 10 ALIGNMENT 0 YS2-11p06.p1k chr14 354 582 784301 784300 F 229 0.00 582 reject_low 19 ALIGNMENT 0 YS2-11p06.p1k chr12 74 217 1065022 1065026 F 144 0.00 582 reject_low 16 ALIGNMENT 0 YS2-11p06.p1k chr12 566 582 1071863 1071862 F 17 0.00 582 reject_low 23 ALIGNMENT 247 YS2-11p06.p1k chr08 203 565 556836 557198 F 363 93.66 582 reject_low 5 ALIGNMENT 0 YS2-11p06.p1k chr12 582 566 5450 5449 C 17 0.00 582 reject_low 13 ALIGNMENT 243 YS2-11p06.q1k chr06 32 379 4472 4814 F 348 94.54 1321 reject_low 4 ALIGNMENT 98 YS2-11p06.p1k chr10 565 402 6776 6931 C 164 89.63 582 reject_low 17 ALIGNMENT 0 YS2-11p06.p1k chr06 582 566 4473 4472 C 17 0.00 582 reject_low 7 ALIGNMENT 0 YS2-11p06.p1k chr12 221 343 1065148 1071641 F 123 0.00 582 reject_low 23 ALIGNMENT 0 YS2-11p06.p1k chr06 79 62 4848 4847 C 18 0.00 582 reject_low 4 ALIGNMENT 185 YS2-11p06.p1k chr12 218 565 1065027 1065357 F 348 90.23 582 reject_low 16 ALIGNMENT 32 YS2-11p06.p1k chr12 34 73 1064982 1065021 F 40 97.50 582 reject_low 1,16,23 ALIGNMENT 52 YS2-11p06.p1k chr14 34 353 783973 784301 F 320 86.88 582 reject_low 19 ALIGNMENT 243 YS2-11p06.p1k chr06 565 218 4472 4814 C 348 94.54 582 reject_low 7 ALIGNMENT 98 YS2-11p06.q1k chr10 32 195 6776 6931 F 164 89.63 1321 reject_low 18 ALIGNMENT 222 YS2-11p06.q1k chr14 32 323 6405 6689 F 292 95.21 1321 reject_low 9 ALIGNMENT 223 YS2-11p06.p1k chr13 565 306 5325 5588 C 260 96.92 582 reject_low 12 ALIGNMENT 217 YS2-11p06.q1k chr12 32 311 5449 5722 F 280 95.36 1321 accept_tel 0 ALIGNMENT 0 YS2-11p06.p1k chr12 285 62 5723 5722 C 224 0.00 582 reject_low 13 ALIGNMENT 0 YS2-11p06.p1k chr06 217 62 4815 4814 C 156 0.00 582 reject_low 7 ALIGNMENT 0 YS2-11p06.p1k chr06 582 236 4690 4689 C 347 0.00 582 reject_low 4 ALIGNMENT 237 YS2-11p06.q1k chr04 339 32 1525355 1525662 C 308 95.45 1321 reject_low 6 ALIGNMENT 0 YS2-11p06.p1k chr04 566 582 1525662 1525661 F 17 0.00 582 reject_low 8 ALIGNMENT 0 YS2-11p06.p1k chr12 74 80 1065022 1065006 F 7 0.00 582 reject_low 1,23 ALIGNMENT 0 YS2-11p06.p1k chr12 566 582 1065357 1065356 F 17 0.00 582 reject_low 16 ALIGNMENT 244 YS2-11p06.p1k chr12 565 179 10984 11357 C 387 93.28 582 accept_tel 0 ALIGNMENT 0 YS2-11p06.p1k chr03 582 350 120 119 C 233 0.00 582 reject_low 24 ALIGNMENT 0 YS2-11p06.p1k chr13 305 62 5589 5588 C 244 0.00 582 reject_low 12 ALIGNMENT 27 YS2-11p06.p1k chr13 70 231 924267 924428 F 162 88.89 582 reject_low 20 ALIGNMENT 0 YS2-11p06.p1k chr12 582 566 10985 10984 C 17 0.00 582 accept_tel 0 ALIGNMENT 25 YS2-11p06.p1k chr06 235 80 4689 4847 C 156 89.10 582 reject_low 4 ALIGNMENT 22 YS2-11p06.p1k chr01 68 201 230069 230204 F 134 88.06 582 reject_low 22 ALIGNMENT 25 YS2-11p06.p1k chr07 135 68 2 66 C 68 91.18 582 reject_low 21 ALIGNMENT 215 YS2-11p07.q1k chr02 647 36 569219 569828 C 612 79.41 1060 accept 0 ALIGNMENT 639 YS2-11p07.p1k chr02 27 1085 567364 568427 F 1059 88.57 1220 accept 0 ALIGNMENT 104 YS2-11p08.p1k chr12 1084 887 3642 3835 C 198 85.35 1259 reject_low 17 ALIGNMENT 56 YS2-11p08.p1k chr16 370 425 944290 944345 F 56 100.00 1259 reject_low 11 ALIGNMENT 0 YS2-11p08.p1k chr02 265 204 4138 4153 C 62 0.00 1259 reject_low 14 ALIGNMENT 24 YS2-11p08.p1k chr08 266 295 558694 558723 F 30 93.33 1259 reject_low 12 ALIGNMENT 111 YS2-11p08.p1k chr15 24 145 1086145 1086266 F 122 97.54 1259 ambiguous_tel 9 ALIGNMENT 858 YS2-11p08.p1k chr16 1150 147 3267 4267 C 1004 95.42 1259 ambiguous_tel 1 ALIGNMENT 0 YS2-11p08.p1k chr16 296 315 944271 944266 F 20 0.00 1259 reject_low 11 ALIGNMENT 860 YS2-11p08.p1k chr10 1118 147 3762 4729 C 972 96.40 1259 ambiguous_tel 3 ALIGNMENT 174 YS2-11p08.p1k chr02 203 24 4154 4333 C 180 99.44 1259 reject_low 14 ALIGNMENT 928 YS2-11p08.q1k chr10 38 1069 438 1469 F 1032 97.00 1069 ambiguous_tel 3 ALIGNMENT 117 YS2-11p08.p1k chr07 24 145 1085886 1086007 F 122 99.18 1259 ambiguous_tel 4 ALIGNMENT 114 YS2-11p08.p1k chr10 145 24 5333 5454 C 122 98.36 1259 ambiguous_tel 3 ALIGNMENT 0 YS2-11p08.p1k chr08 265 204 3669 3684 C 62 0.00 1259 reject_low 15 ALIGNMENT 928 YS2-11p08.q1k chr16 1069 38 946694 947725 C 1032 97.00 1069 reject_low 11 ALIGNMENT 168 YS2-11p08.p1k chr06 203 24 2990 3169 C 180 98.33 1259 reject_low 18 ALIGNMENT 29 YS2-11p08.p1k chr02 348 316 4079 4111 C 33 96.97 1259 reject_low 14 ALIGNMENT 0 YS2-11p08.p1k chr16 204 265 944225 944240 F 62 0.00 1259 reject_low 11 ALIGNMENT 117 YS2-11p08.p1k chr16 145 24 4870 4991 C 122 99.18 1259 ambiguous_tel 1 ALIGNMENT 105 YS2-11p08.p1k chr06 1090 887 2674 2872 C 204 85.29 1259 reject_low 18 ALIGNMENT 918 YS2-11p08.q1k chr02 38 1069 252 1286 F 1032 96.71 1069 reject_low 14 ALIGNMENT 921 YS2-11p08.q1k chr12 1069 38 1076889 1077923 C 1032 96.80 1069 ambiguous_tel 8 ALIGNMENT 0 YS2-11p08.p1k chr16 426 886 944346 944341 F 461 0.00 1259 reject_low 11 ALIGNMENT 56 YS2-11p08.p1k chr02 425 370 4033 4088 C 56 100.00 1259 reject_low 14 ALIGNMENT 56 YS2-11p08.p1k chr08 425 370 3564 3619 C 56 100.00 1259 reject_low 15 ALIGNMENT 118 YS2-11p08.p1k chr08 887 1150 558795 559055 F 264 82.58 1259 reject_low 12 ALIGNMENT 111 YS2-11p08.p1k chr04 24 145 1526980 1527101 F 122 97.54 1259 ambiguous_tel 7 ALIGNMENT 0 YS2-11p08.p1k chr07 146 146 1086008 1086609 F 1 0.00 1259 ambiguous_tel 4 ALIGNMENT 0 YS2-11p08.p1k chr14 146 146 4359 4960 C 1 0.00 1259 ambiguous_tel 2 ALIGNMENT 0 YS2-11p08.p1k chr12 886 426 9371 9366 C 461 0.00 1259 reject_low 13 ALIGNMENT 114 YS2-11p08.p1k chr09 145 24 5350 5471 C 122 98.36 1259 ambiguous_tel 0 ALIGNMENT 921 YS2-11p08.q1k chr15 1069 38 1089853 1090887 C 1032 96.80 1069 ambiguous_tel 9 ALIGNMENT 174 YS2-11p08.p1k chr08 24 203 558498 558677 F 180 99.44 1259 reject_low 12 ALIGNMENT 24 YS2-11p08.p1k chr12 295 266 9442 9471 C 30 93.33 1259 reject_low 13 ALIGNMENT 855 YS2-11p08.p1k chr12 147 1150 1067242 1068242 F 1004 95.32 1259 ambiguous_tel 6 ALIGNMENT 171 YS2-11p08.p1k chr12 203 24 9488 9667 C 180 98.89 1259 reject_low 13 ALIGNMENT 921 YS2-11p08.q1k chr04 1069 38 1530688 1531722 C 1032 96.80 1069 ambiguous_tel 7 ALIGNMENT 0 YS2-11p08.p1k chr06 315 296 2948 2943 C 20 0.00 1259 reject_low 18 ALIGNMENT 29 YS2-11p08.p1k chr08 348 316 3610 3642 C 33 96.97 1259 reject_low 15 ALIGNMENT 0 YS2-11p08.p1k chr02 369 349 4089 4078 C 21 0.00 1259 reject_low 14 ALIGNMENT 53 YS2-11p08.p1k chr13 425 370 3708 3763 C 56 98.21 1259 reject_low 16 ALIGNMENT 56 YS2-11p08.p1k chr08 370 425 558743 558798 F 56 100.00 1259 reject_low 12 ALIGNMENT 0 YS2-11p08.p1k chr08 886 426 3568 3563 C 461 0.00 1259 reject_low 15 ALIGNMENT 879 YS2-11p08.q1k chr12 38 1069 455 1483 F 1032 95.74 1069 reject_low 17 ALIGNMENT 922 YS2-11p08.q1k chr14 38 1069 343 1374 F 1032 96.80 1069 ambiguous_tel 2 ALIGNMENT 114 YS2-11p08.p1k chr12 24 145 1066597 1066718 F 122 98.36 1259 ambiguous_tel 6,8 ALIGNMENT 928 YS2-11p08.q1k chr09 38 1069 455 1486 F 1032 97.00 1069 ambiguous_tel 0 ALIGNMENT 0 YS2-11p08.p1k chr15 146 146 1086267 1086868 F 1 0.00 1259 ambiguous_tel 9 ALIGNMENT 0 YS2-11p08.p1k chr08 369 349 3620 3609 C 21 0.00 1259 reject_low 15 ALIGNMENT 794 YS2-11p08.p1k chr05 1150 147 3422 4441 C 1004 93.33 1259 ambiguous_tel 10 ALIGNMENT 0 YS2-11p08.p1k chr12 315 296 3911 3906 C 20 0.00 1259 reject_low 17 ALIGNMENT 0 YS2-11p08.p1k chr06 369 349 2925 2914 C 21 0.00 1259 reject_low 18 ALIGNMENT 921 YS2-11p08.q1k chr12 1069 38 1070226 1071260 C 1032 96.80 1069 ambiguous_tel 6 ALIGNMENT 852 YS2-11p08.p1k chr04 147 1150 1527704 1528704 F 1004 95.22 1259 ambiguous_tel 7 ALIGNMENT 864 YS2-11p08.p1k chr09 1150 147 3746 4746 C 1004 95.62 1259 ambiguous_tel 0 ALIGNMENT 0 YS2-11p08.p1k chr13 886 426 3712 3707 C 461 0.00 1259 reject_low 16 ALIGNMENT 0 YS2-11p08.p1k chr09 146 146 4747 5349 C 1 0.00 1259 ambiguous_tel 0 ALIGNMENT 0 YS2-11p08.p1k chr05 146 146 571931 572532 F 1 0.00 1259 ambiguous_tel 5 ALIGNMENT 0 YS2-11p08.p1k chr10 146 146 4730 5332 C 1 0.00 1259 ambiguous_tel 3 ALIGNMENT 853 YS2-11p08.p1k chr05 147 1105 572533 573487 F 959 96.56 1259 ambiguous_tel 5 ALIGNMENT 912 YS2-11p08.q1k chr08 38 1069 417 1451 F 1032 96.51 1069 reject_low 15 ALIGNMENT 0 YS2-11p08.p1k chr05 146 146 4442 4964 C 1 0.00 1259 ambiguous_tel 10 ALIGNMENT 121 YS2-11p08.p1k chr12 1150 887 9110 9370 C 264 82.95 1259 reject_low 13 ALIGNMENT 29 YS2-11p08.p1k chr12 348 316 9413 9445 C 33 96.97 1259 reject_low 13 ALIGNMENT 0 YS2-11p08.p1k chr04 146 146 1527102 1527703 F 1 0.00 1259 ambiguous_tel 7 ALIGNMENT 909 YS2-11p08.q1k chr13 38 1069 433 1467 F 1032 96.41 1069 reject_low 16 ALIGNMENT 111 YS2-11p08.p1k chr12 24 145 1073181 1073302 F 122 97.54 1259 reject_low 19 ALIGNMENT 0 YS2-11p08.p1k chr06 886 426 2873 2868 C 461 0.00 1259 reject_low 18 ALIGNMENT 0 YS2-11p08.p1k chr12 369 349 3888 3877 C 21 0.00 1259 reject_low 17 ALIGNMENT 24 YS2-11p08.p1k chr06 295 266 2944 2973 C 30 93.33 1259 reject_low 18 ALIGNMENT 56 YS2-11p08.p1k chr06 425 370 2869 2924 C 56 100.00 1259 reject_low 18 ALIGNMENT 928 YS2-11p08.q1k chr07 1069 38 1089594 1090625 C 1032 97.00 1069 ambiguous_tel 4 ALIGNMENT 0 YS2-11p08.p1k chr08 296 315 558724 558719 F 20 0.00 1259 reject_low 12 ALIGNMENT 102 YS2-11p08.p1k chr02 1090 887 3838 4036 C 204 84.80 1259 reject_low 14 ALIGNMENT 909 YS2-11p08.q1k chr12 38 1069 6092 7126 F 1032 96.41 1069 reject_low 13 ALIGNMENT 909 YS2-11p08.q1k chr08 1069 38 561041 562075 C 1032 96.41 1069 reject_low 12 ALIGNMENT 0 YS2-11p08.p1k chr12 315 296 9446 9441 C 20 0.00 1259 reject_low 13 ALIGNMENT 29 YS2-11p08.p1k chr06 348 316 2915 2947 C 33 96.97 1259 reject_low 18 ALIGNMENT 610 YS2-11p08.q1k chr06 378 1069 2 693 F 692 96.39 1069 reject_low 18 ALIGNMENT 29 YS2-11p08.p1k chr16 316 348 944267 944299 F 33 96.97 1259 reject_low 11 ALIGNMENT 0 YS2-11p08.p1k chr13 369 349 3764 3753 C 21 0.00 1259 reject_low 16 ALIGNMENT 0 YS2-11p08.p1k chr08 315 296 3643 3638 C 20 0.00 1259 reject_low 15 ALIGNMENT 0 YS2-11p08.p1k chr16 349 369 944300 944289 F 21 0.00 1259 reject_low 11 ALIGNMENT 906 YS2-11p08.q1k chr05 38 1069 236 1270 F 1032 96.32 1069 ambiguous_tel 10 ALIGNMENT 105 YS2-11p08.p1k chr08 1090 887 3369 3567 C 204 85.29 1259 reject_low 15 ALIGNMENT 114 YS2-11p08.p1k chr05 145 24 4965 5086 C 122 98.36 1259 ambiguous_tel 10 ALIGNMENT 0 YS2-11p08.p1k chr06 265 204 2974 2989 C 62 0.00 1259 reject_low 18 ALIGNMENT 0 YS2-11p08.p1k chr08 426 886 558799 558794 F 461 0.00 1259 reject_low 12 ALIGNMENT 108 YS2-11p08.p1k chr13 1090 887 3513 3711 C 204 85.78 1259 reject_low 16 ALIGNMENT 24 YS2-11p08.p1k chr13 295 266 3783 3812 C 30 93.33 1259 reject_low 16 ALIGNMENT 29 YS2-11p08.p1k chr12 348 316 3878 3910 C 33 96.97 1259 reject_low 17 ALIGNMENT 854 YS2-11p08.p1k chr07 147 1109 1086610 1087568 F 963 96.47 1259 ambiguous_tel 4 ALIGNMENT 0 YS2-11p08.p1k chr02 315 296 4112 4107 C 20 0.00 1259 reject_low 14 ALIGNMENT 0 YS2-11p08.q1k chr06 62 377 2 1 F 316 0.00 1069 reject_low 18 ALIGNMENT 0 YS2-11p08.p1k chr16 146 146 4268 4869 C 1 0.00 1259 ambiguous_tel 1 ALIGNMENT 928 YS2-11p08.q1k chr05 1069 38 575517 576548 C 1032 97.00 1069 ambiguous_tel 5 ALIGNMENT 171 YS2-11p08.p1k chr16 24 203 944045 944224 F 180 98.89 1259 reject_low 11 ALIGNMENT 0 YS2-11p08.p1k chr12 146 851 1073302 1073301 F 706 0.00 1259 reject_low 19 ALIGNMENT 0 YS2-11p08.p1k chr13 315 296 3787 3782 C 20 0.00 1259 reject_low 16 ALIGNMENT 117 YS2-11p08.p1k chr14 145 24 4961 5082 C 122 99.18 1259 ambiguous_tel 2 ALIGNMENT 0 YS2-11p08.p1k chr13 265 204 3813 3828 C 62 0.00 1259 reject_low 16 ALIGNMENT 29 YS2-11p08.p1k chr13 348 316 3754 3786 C 33 96.97 1259 reject_low 16 ALIGNMENT 171 YS2-11p08.p1k chr12 203 24 3953 4132 C 180 98.89 1259 reject_low 17 ALIGNMENT 24 YS2-11p08.p1k chr02 295 266 4108 4137 C 30 93.33 1259 reject_low 14 ALIGNMENT 858 YS2-11p08.p1k chr14 1150 147 3358 4358 C 1004 95.42 1259 ambiguous_tel 2 ALIGNMENT 124 YS2-11p08.p1k chr16 887 1150 944342 944602 F 264 83.33 1259 reject_low 11 ALIGNMENT 0 YS2-11p08.p1k chr12 265 204 9472 9487 C 62 0.00 1259 reject_low 13 ALIGNMENT 0 YS2-11p08.p1k chr08 349 369 558753 558742 F 21 0.00 1259 reject_low 12 ALIGNMENT 0 YS2-11p08.p1k chr12 146 146 1066719 1067241 F 1 0.00 1259 ambiguous_tel 6 ALIGNMENT 56 YS2-11p08.p1k chr12 425 370 3832 3887 C 56 100.00 1259 reject_low 17 ALIGNMENT 851 YS2-11p08.p1k chr15 147 1118 1086869 1087836 F 972 96.09 1259 ambiguous_tel 9 ALIGNMENT 0 YS2-11p08.p1k chr12 146 146 1066719 1073904 F 1 0.00 1259 ambiguous_tel 8 ALIGNMENT 174 YS2-11p08.p1k chr08 203 24 3685 3864 C 180 99.44 1259 reject_low 15 ALIGNMENT 0 YS2-11p08.p1k chr12 369 349 9423 9412 C 21 0.00 1259 reject_low 13 ALIGNMENT 29 YS2-11p08.p1k chr08 316 348 558720 558752 F 33 96.97 1259 reject_low 12 ALIGNMENT 117 YS2-11p08.p1k chr05 24 145 571809 571930 F 122 99.18 1259 ambiguous_tel 5 ALIGNMENT 0 YS2-11p08.p1k chr12 265 204 3937 3952 C 62 0.00 1259 reject_low 17 ALIGNMENT 24 YS2-11p08.p1k chr08 295 266 3639 3668 C 30 93.33 1259 reject_low 15 ALIGNMENT 24 YS2-11p08.p1k chr12 295 266 3907 3936 C 30 93.33 1259 reject_low 17 ALIGNMENT 24 YS2-11p08.p1k chr16 266 295 944241 944270 F 30 93.33 1259 reject_low 11 ALIGNMENT 0 YS2-11p08.p1k chr08 204 265 558678 558693 F 62 0.00 1259 reject_low 12 ALIGNMENT 0 YS2-11p08.p1k chr02 886 426 4037 4032 C 461 0.00 1259 reject_low 14 ALIGNMENT 56 YS2-11p08.p1k chr12 425 370 9367 9422 C 56 100.00 1259 reject_low 13 ALIGNMENT 171 YS2-11p08.p1k chr13 203 24 3829 4008 C 180 98.89 1259 reject_low 16 ALIGNMENT 928 YS2-11p08.q1k chr16 38 1069 252 1283 F 1032 97.00 1069 ambiguous_tel 1 ALIGNMENT 847 YS2-11p08.p1k chr12 147 1105 1073905 1074859 F 959 96.35 1259 ambiguous_tel 8 ALIGNMENT 0 YS2-11p08.p1k chr12 886 426 3836 3831 C 461 0.00 1259 reject_low 17 ALIGNMENT 337 YS2-11p09.q1k vc_2 676 1084 2164 2571 F 409 94.87 1210 reject_low 6 ALIGNMENT 51 YS2-11p09.q1k vc_7 887 836 6360 6411 C 52 100.00 1210|1,0 reject_low 14 ALIGNMENT 0 YS2-11p09.q1k vc_4 812 765 1447 1446 C 48 0.00 1210 reject_low 10 ALIGNMENT 0 YS2-11p09.q1k vc_4 62 675 126 125 F 614 0.00 1210 reject_low 9 ALIGNMENT 339 YS2-11p09.q1k vc_4 1203 676 5294 5812 C 528 90.15 1210 reject_low 4 ALIGNMENT 0 YS2-11p09.q1k vc_7 62 638 13525 13524 F 577 0.00 1210 reject_low 17 ALIGNMENT 0 YS2-11p09.q1k vc_1 635 62 2513 2512 C 574 0.00 1210 reject_low 11 ALIGNMENT 346 YS2-11p09.q1k vc_5 676 1203 2398 2914 F 528 90.53 1210 reject_low 2 ALIGNMENT 38 YS2-11p09.q1k vc_7 639 676 13525 13562 F 38 100.00 1210 reject_low 17 ALIGNMENT 0 YS2-11p09.q1k vc_7 835 62 6412 6411 C 774 0.00 1210 reject_low 14 ALIGNMENT 0 YS2-11p09.q1k vc_7 1161 1085 4684 4974 C 77 0.00 1210 reject_low 14 ALIGNMENT 0 YS2-11p09.q1k vc_7 886 887 5172 6360 C 0 0.00 1210 reject_low 14 ALIGNMENT 0 YS2-11p09.q1k vc_2 812 677 2106 2105 C 136 0.00 1210 reject_low 12 ALIGNMENT 0 YS2-11p09.q1k chr10 636 812 523235 523234 F 177 0.00 1210 accept_chi 1 ALIGNMENT 0 YS2-11p09.q1k vc_2 62 675 2164 2163 F 614 0.00 1210 reject_low 6 ALIGNMENT 0 YS2-11p09.q1k vc_1 812 677 2473 2472 C 136 0.00 1210 reject_low 11 ALIGNMENT 156 YS2-11p09.q1k vc_4 676 837 6353 6514 F 162 99.38 1210|1,0 reject_low 8 ALIGNMENT 0 YS2-11p09.q1k vc_2 635 62 2146 2145 C 574 0.00 1210 reject_low 12 ALIGNMENT 337 YS2-11p09.q1k vc_1 676 1084 2531 2938 F 409 94.87 1210 reject_low 5 ALIGNMENT 0 YS2-11p09.q1k vc_1 62 675 2531 2530 F 614 0.00 1210 reject_low 5 ALIGNMENT 0 YS2-11p09.q1k vc_7 677 812 100 99 F 136 0.00 1210 reject_low 16 ALIGNMENT 23 YS2-11p09.q1k vc_7 1203 1162 4645 4683 C 42 90.48 1210 reject_low 14 ALIGNMENT 129 YS2-11p09.q1k vc_7 1084 886 4975 5172 C 199 89.45 1210|0,1 reject_low 14 ALIGNMENT 346 YS2-11p09.q1k vc_7 1203 676 2211 2727 C 528 90.53 1210 reject_low 3 ALIGNMENT 0 YS2-11p09.p1k chr10 649 632 522635 522634 C 18 0.00 649 accept_chi 0 ALIGNMENT 0 YS2-11p09.q1k vc_5 812 677 5026 5025 C 136 0.00 1210 reject_low 15 ALIGNMENT 41 YS2-11p09.q1k vc_4 636 676 5831 5871 F 41 100.00 1210 reject_low 8 ALIGNMENT 36 YS2-11p09.q1k vc_5 673 638 1 36 C 36 100.00 1210 reject_low 18 ALIGNMENT 0 YS2-11p09.q1k vc_5 637 62 5064 5063 C 576 0.00 1210 reject_low 15 ALIGNMENT 84 YS2-11p09.q1k vc_4 764 676 1446 1534 C 89 98.88 1210 reject_low 10 ALIGNMENT 0 YS2-11p09.q1k vc_3 62 675 2531 2530 F 614 0.00 1210 reject_low 7 ALIGNMENT 38 YS2-11p09.q1k vc_7 639 676 63 100 F 38 100.00 1210 reject_low 16 ALIGNMENT 0 YS2-11p09.q1k vc_4 838 1144 288 1876 F 307 0.00 1210 reject_low 9 ALIGNMENT 0 YS2-11p09.q1k vc_3 812 677 2473 2472 C 136 0.00 1210 reject_low 13 ALIGNMENT 0 YS2-11p09.q1k vc_4 677 676 5872 6353 F 0 0.00 1210 reject_low 8 ALIGNMENT 0 YS2-11p09.q1k vc_3 635 62 2513 2512 C 574 0.00 1210 reject_low 13 ALIGNMENT 0 YS2-11p09.q1k vc_4 62 635 5831 5830 F 574 0.00 1210 reject_low 8 ALIGNMENT 0 YS2-11p09.q1k vc_5 637 62 37 36 C 576 0.00 1210 reject_low 18 ALIGNMENT 0 YS2-11p09.q1k vc_7 675 62 2728 2727 C 614 0.00 1210 reject_low 3 ALIGNMENT 0 YS2-11p09.q1k vc_5 812 674 2 1 C 139 0.00 1210 reject_low 18 ALIGNMENT 0 YS2-11p09.q1k vc_5 62 675 2398 2397 F 614 0.00 1210 reject_low 2 ALIGNMENT 39 YS2-11p09.q1k vc_5 676 638 5025 5063 C 39 100.00 1210 reject_low 15 ALIGNMENT 41 YS2-11p09.q1k vc_2 676 636 2105 2145 C 41 100.00 1210 reject_low 12 ALIGNMENT 591 YS2-11p09.p1k chr10 631 31 522634 523234 C 601 99.50 649 accept_chi 0 ALIGNMENT 41 YS2-11p09.q1k vc_3 676 636 2472 2512 C 41 100.00 1210 reject_low 13 ALIGNMENT 0 YS2-11p09.q1k vc_7 677 812 13562 13561 F 136 0.00 1210 reject_low 17 ALIGNMENT 25 YS2-11p09.q1k vc_4 1145 1203 1877 1930 F 59 86.44 1210 reject_low 9 ALIGNMENT 41 YS2-11p09.q1k vc_1 676 636 2472 2512 C 41 100.00 1210 reject_low 11 ALIGNMENT 590 YS2-11p09.q1k chr10 35 635 522634 523235 F 601 99.50 1210 accept_chi 1 ALIGNMENT 156 YS2-11p09.q1k vc_4 676 837 126 287 F 162 99.38 1210 reject_low 9 ALIGNMENT 0 YS2-11p09.q1k vc_4 675 62 5813 5812 C 614 0.00 1210 reject_low 4 ALIGNMENT 0 YS2-11p09.q1k vc_7 62 638 63 62 F 577 0.00 1210 reject_low 16 ALIGNMENT 337 YS2-11p09.q1k vc_3 676 1084 2531 2938 F 409 94.87 1210 reject_low 7 ALIGNMENT 0 YS2-11p09.q1k vc_4 675 62 1535 1534 C 614 0.00 1210 reject_low 10 ALIGNMENT 991 YS2-11p10.q1k chr02 1176 28 770680 771829 C 1149 96.00 1187 accept 0 ALIGNMENT 964 YS2-11p10.p1k chr02 39 1163 770292 771404 F 1125 96.36 1237 accept 0 ALIGNMENT 651 YS2-11p11.q1k chr02 28 940 495650 496555 F 913 91.35 1232 accept 0 ALIGNMENT 967 YS2-11p11.p1k chr02 1159 24 497215 498355 C 1136 96.04 1199 accept 0 ALIGNMENT 644 YS2-11p12.q1k chr07 35 872 523954 524802 F 838 92.96 1175 accept 0 ALIGNMENT 896 YS2-11p13.p1k chr13 28 1109 891739 892833 F 1082 95.84 1197 accept 0 ALIGNMENT 928 YS2-11p13.q1k chr13 1131 37 894148 895246 C 1095 95.89 1136 accept 0 ALIGNMENT 978 YS2-11p14.q1k chr13 1146 36 465509 466622 C 1111 96.85 1146 accept 0 ALIGNMENT 42 YS2-11p16.q1k vc_4 301 342 5830 5871 F 42 100.00 342 reject_low 4 ALIGNMENT 42 YS2-11p16.q1k vc_1 342 301 2472 2513 C 42 100.00 342 reject_low 2 ALIGNMENT 39 YS2-11p16.q1k vc_5 342 304 5025 5063 C 39 100.00 342 reject_low 5 ALIGNMENT 38 YS2-11p16.q1k vc_7 305 342 13525 13562 F 38 100.00 342 reject_low 6 ALIGNMENT 0 YS2-11p16.q1k vc_4 62 300 5830 5829 F 239 0.00 342 reject_low 4 ALIGNMENT 0 YS2-11p16.p1k chr12 299 317 298963 298962 F 19 0.00 317 accept_chi 1 ALIGNMENT 0 YS2-11p16.q1k vc_7 62 304 13525 13524 F 243 0.00 342 reject_low 6 ALIGNMENT 0 YS2-11p16.q1k vc_3 300 62 2514 2513 C 239 0.00 342 reject_low 3 ALIGNMENT 0 YS2-11p16.q1k vc_5 303 62 5064 5063 C 242 0.00 342 reject_low 5 ALIGNMENT 252 YS2-11p16.p1k chr12 27 298 298689 298963 F 272 98.16 317 accept_chi 1 ALIGNMENT 0 YS2-11p16.q1k vc_5 303 62 37 36 C 242 0.00 342 reject_low 7 ALIGNMENT 267 YS2-11p16.q1k chr12 301 27 298689 298963 C 275 99.27 342 accept_chi 0 ALIGNMENT 0 YS2-11p16.q1k vc_1 300 62 2514 2513 C 239 0.00 342 reject_low 2 ALIGNMENT 42 YS2-11p16.q1k vc_3 342 301 2472 2513 C 42 100.00 342 reject_low 3 ALIGNMENT 36 YS2-11p16.q1k vc_5 339 304 1 36 C 36 100.00 342 reject_low 7 ALIGNMENT 0 YS2-11p16.q1k chr12 342 302 298690 298689 C 41 0.00 342 accept_chi 0 ALIGNMENT 814 YS2-11p17.p1k chr14 23 1120 273704 274807 F 1098 90.98 1123 accept 0 ALIGNMENT 917 YS2-11p17.q1k chr14 1038 25 274262 275273 C 1014 97.63 1038 accept 0 ALIGNMENT 872 YS2-11p18.q1k chr07 38 1033 305802 306780 F 996 97.39 1065 accept 0 ALIGNMENT 0 YS2-11p18.p1k chr02 609 882 646133 646132 F 274 0.00 1225 reject_low 1 ALIGNMENT 0 YS2-11p18.p1k chr02 62 568 646094 646093 F 507 0.00 1225 reject_low 1 ALIGNMENT 23 YS2-11p18.p1k chr13 613 574 239354 239393 C 40 97.50 1225 reject_low 3 ALIGNMENT 0 YS2-11p18.p1k chr04 882 614 1385463 1385462 C 269 0.00 1225 reject_low 2 ALIGNMENT 20 YS2-11p18.p1k chr15 613 579 355083 355117 C 35 100.00 1225 reject_low 4 ALIGNMENT 0 YS2-11p18.p1k chr15 882 614 355084 355083 C 269 0.00 1225 reject_low 4 ALIGNMENT 0 YS2-11p18.p1k chr13 882 614 239355 239354 C 269 0.00 1225 reject_low 3 ALIGNMENT 23 YS2-11p18.p1k chr04 613 573 1385462 1385502 C 41 97.56 1225 reject_low 2 ALIGNMENT 20 YS2-11p18.p1k chr02 574 608 40580 40614 F 35 97.14 1225 reject_low 5 ALIGNMENT 0 YS2-11p18.p1k chr02 62 573 40580 40579 F 512 0.00 1225 reject_low 5 ALIGNMENT 946 YS2-11p18.p1k chr07 1193 30 306602 307775 C 1164 95.10 1225 accept 0 ALIGNMENT 0 YS2-11p18.p1k chr02 609 882 40614 40613 F 274 0.00 1225 reject_low 5 ALIGNMENT 0 YS2-11p18.p1k chr13 573 62 239394 239393 C 512 0.00 1225 reject_low 3 ALIGNMENT 0 YS2-11p18.p1k chr04 572 62 1385503 1385502 C 511 0.00 1225 reject_low 2 ALIGNMENT 22 YS2-11p18.p1k chr02 569 608 646094 646133 F 40 95.00 1225 reject_low 1 ALIGNMENT 0 YS2-11p18.p1k chr15 578 62 355118 355117 C 517 0.00 1225 reject_low 4 ALIGNMENT 960 YS2-11p19.q1k chr15 1107 38 674458 675527 C 1070 97.94 1113 accept 0 ALIGNMENT 926 YS2-11p19.p1k chr15 31 1175 672888 674034 F 1145 94.67 1193 accept 0 ALIGNMENT 974 YS2-11p20.q1k chr16 38 1100 132521 133583 F 1063 97.55 1100 accept 0 ALIGNMENT 1038 YS2-11p20.p1k chr16 1161 40 137058 138179 C 1122 98.48 1162 accept 0 ALIGNMENT 899 YS2-11p21.q1k chr14 35 1105 604357 605416 F 1071 95.89 1174 accept 0 ALIGNMENT 706 YS2-11p23.q1k chr02 30 936 647049 647949 F 907 94.38 1131 accept 0 ALIGNMENT 985 YS2-11p23.p1k chr02 1128 34 647367 648460 C 1095 97.90 1141 accept 0 ALIGNMENT 1023 YS2-12a01.p1k chr04 62 1299 588164 589402 F 1238 95.48 1299 accept 0 ALIGNMENT 944 YS2-12a01.q1k chr04 1136 30 593008 594127 C 1107 95.93 1281 accept 0 ALIGNMENT 1043 YS2-12a04.q1k chr11 1202 30 525866 527054 C 1173 96.85 1377 accept 0 ALIGNMENT 1001 YS2-12a04.p1k chr11 39 1255 524532 525743 F 1217 95.07 1343 accept 0 ALIGNMENT 0 YS2-12a05.q1k vc_3 172 62 2513 2512 C 111 0.00 213 reject_vc 10 ALIGNMENT 41 YS2-12a05.q1k vc_1 213 173 2472 2512 C 41 100.00 213 reject_vc 8 ALIGNMENT 474 YS2-12a05.p1k vc_3 769 1 977 1749 C 769 88.17 771 reject_vc 4 ALIGNMENT 474 YS2-12a05.p1k vc_2 769 1 977 1749 C 769 88.17 771 reject_vc 3 ALIGNMENT 0 YS2-12a05.q1k vc_1 172 62 2513 2512 C 111 0.00 213 reject_vc 8 ALIGNMENT 0 YS2-12a05.q1k vc_7 62 175 13525 13524 F 114 0.00 213 reject_vc 13 ALIGNMENT 0 YS2-12a05.q1k vc_4 62 172 5831 5830 F 111 0.00 213 reject_vc 11 ALIGNMENT 36 YS2-12a05.q1k vc_5 210 175 1 36 C 36 100.00 213 reject_vc 14 ALIGNMENT 41 YS2-12a05.q1k vc_3 213 173 2472 2512 C 41 100.00 213 reject_vc 10 ALIGNMENT 39 YS2-12a05.q1k vc_5 213 175 5025 5063 C 39 100.00 213 reject_vc 12 ALIGNMENT 468 YS2-12a05.p1k vc_7 1 769 456 1228 F 769 87.65 771 reject_vc 5 ALIGNMENT 41 YS2-12a05.q1k vc_2 213 173 2105 2145 C 41 100.00 213 reject_vc 9 ALIGNMENT 467 YS2-12a05.p1k vc_6 1 671 3712 4387 F 671 90.31 771 reject_vc 7 ALIGNMENT 0 YS2-12a05.q1k vc_5 174 62 37 36 C 113 0.00 213 reject_vc 14 ALIGNMENT 0 YS2-12a05.q1k vc_2 172 62 2146 2145 C 111 0.00 213 reject_vc 9 ALIGNMENT 0 YS2-12a05.q1k vc_5 174 62 5064 5063 C 113 0.00 213 reject_vc 12 ALIGNMENT 477 YS2-12a05.p1k vc_5 769 1 3897 4669 C 769 88.30 771 reject_vc 1 ALIGNMENT 0 YS2-12a05.q1k chr12 173 213 73249 73248 F 41 0.00 213 accept 0 ALIGNMENT 38 YS2-12a05.q1k vc_7 176 213 13525 13562 F 38 100.00 213 reject_vc 13 ALIGNMENT 109 YS2-12a05.q1k chr12 38 172 73113 73249 F 135 96.30 213 accept 0 ALIGNMENT 41 YS2-12a05.q1k vc_4 173 213 5831 5871 F 41 100.00 213 reject_vc 11 ALIGNMENT 468 YS2-12a05.p1k vc_7 1 731 13918 14653 F 731 88.51 771 reject_vc 6 ALIGNMENT 474 YS2-12a05.p1k vc_1 769 1 977 1749 C 769 88.17 771 reject_vc 2 ALIGNMENT 927 YS2-12a06.q1k chr14 1138 22 571207 572333 C 1117 94.99 1357 reject_low 1 ALIGNMENT 1059 YS2-12a06.p1k chr14 1232 24 599930 601142 C 1209 96.77 1354 accept 0 ALIGNMENT 1011 YS2-12a06.p1k chr14 24 1232 571111 572323 F 1209 95.45 1354 reject_low 1 ALIGNMENT 971 YS2-12a06.q1k chr14 28 1138 599926 601046 F 1111 96.58 1357 accept 0 ALIGNMENT 38 YS2-12a08.q1k vc_7 256 293 13525 13562 F 38 100.00 293 reject_low 7 ALIGNMENT 39 YS2-12a08.q1k vc_5 293 255 5025 5063 C 39 100.00 293 reject_low 6 ALIGNMENT 0 YS2-12a08.q1k vc_5 254 62 37 36 C 193 0.00 293 reject_low 8 ALIGNMENT 41 YS2-12a08.q1k vc_3 293 253 2472 2512 C 41 100.00 293 reject_low 4 ALIGNMENT 41 YS2-12a08.q1k vc_4 253 293 5831 5871 F 41 100.00 293 reject_low 5 ALIGNMENT 41 YS2-12a08.q1k vc_1 293 253 2472 2512 C 41 100.00 293 reject_low 2 ALIGNMENT 0 YS2-12a08.q1k vc_4 62 252 5831 5830 F 191 0.00 293 reject_low 5 ALIGNMENT 41 YS2-12a08.q1k vc_2 293 253 2105 2145 C 41 100.00 293 reject_low 3 ALIGNMENT 0 YS2-12a08.q1k vc_2 252 62 2146 2145 C 191 0.00 293 reject_low 3 ALIGNMENT 0 YS2-12a08.q1k chr11 293 253 482685 482684 C 41 0.00 293 accept_chi 1 ALIGNMENT 36 YS2-12a08.q1k vc_5 290 255 1 36 C 36 100.00 293 reject_low 8 ALIGNMENT 0 YS2-12a08.q1k vc_3 252 62 2513 2512 C 191 0.00 293 reject_low 4 ALIGNMENT 203 YS2-12a08.q1k chr11 252 40 482684 482896 C 213 99.53 293 accept_chi 1 ALIGNMENT 0 YS2-12a08.q1k vc_7 62 255 13525 13524 F 194 0.00 293 reject_low 7 ALIGNMENT 0 YS2-12a08.p1k chr11 271 289 482896 482895 F 19 0.00 289 accept_chi 0 ALIGNMENT 0 YS2-12a08.q1k vc_5 254 62 5064 5063 C 193 0.00 293 reject_low 6 ALIGNMENT 203 YS2-12a08.p1k chr11 58 270 482684 482896 F 213 99.53 289 accept_chi 0 ALIGNMENT 0 YS2-12a08.q1k vc_1 252 62 2513 2512 C 191 0.00 293 reject_low 2 ALIGNMENT 1048 YS2-12a09.q1k chr07 40 1235 1064811 1066013 F 1196 96.40 1373 accept 0 ALIGNMENT 911 YS2-12a09.p1k chr07 1141 54 1065376 1066474 C 1088 96.05 1291 accept 0 ALIGNMENT 40 YS2-12a11.q1k vc_2 386 347 2105 2144 C 40 100.00 386 reject_low 3 ALIGNMENT 40 YS2-12a11.q1k vc_3 386 347 2472 2511 C 40 100.00 386 reject_low 4 ALIGNMENT 0 YS2-12a11.q1k vc_7 62 348 13525 13524 F 287 0.00 386 reject_low 7 ALIGNMENT 40 YS2-12a11.q1k vc_1 386 347 2472 2511 C 40 100.00 386 reject_low 2 ALIGNMENT 0 YS2-12a11.q1k vc_2 346 62 2145 2144 C 285 0.00 386 reject_low 3 ALIGNMENT 0 YS2-12a11.q1k chr12 386 347 419375 419374 C 40 0.00 386 accept_chi 0 ALIGNMENT 0 YS2-12a11.q1k vc_3 346 62 2512 2511 C 285 0.00 386 reject_low 4 ALIGNMENT 36 YS2-12a11.q1k vc_5 383 348 1 36 C 36 100.00 386 reject_low 8 ALIGNMENT 292 YS2-12a11.q1k chr12 346 37 419374 419685 C 310 98.71 386 accept_chi 0 ALIGNMENT 0 YS2-12a11.p1k chr12 358 374 419685 419684 F 17 0.00 374 accept_chi 1 ALIGNMENT 0 YS2-12a11.q1k vc_5 347 62 37 36 C 286 0.00 386 reject_low 8 ALIGNMENT 40 YS2-12a11.q1k vc_4 347 386 5832 5871 F 40 100.00 386 reject_low 5 ALIGNMENT 0 YS2-12a11.q1k vc_4 62 346 5832 5831 F 285 0.00 386 reject_low 5 ALIGNMENT 0 YS2-12a11.q1k vc_5 347 62 5064 5063 C 286 0.00 386 reject_low 6 ALIGNMENT 38 YS2-12a11.q1k vc_7 349 386 13525 13562 F 38 100.00 386 reject_low 7 ALIGNMENT 39 YS2-12a11.q1k vc_5 386 348 5025 5063 C 39 100.00 386 reject_low 6 ALIGNMENT 292 YS2-12a11.p1k chr12 51 357 419380 419685 F 307 99.02 374 accept_chi 1 ALIGNMENT 0 YS2-12a11.q1k vc_1 346 62 2512 2511 C 285 0.00 386 reject_low 2 ALIGNMENT 1042 YS2-12a12.q1k chr12 40 1294 768811 770087 F 1255 96.02 1430 accept 0 ALIGNMENT 1043 YS2-12a12.p1k chr12 1247 29 770271 771501 C 1219 96.23 1356 accept 0 ALIGNMENT 0 YS2-12a13.q1k vc_2 222 62 2145 2144 C 161 0.00 262 reject_low 3 ALIGNMENT 39 YS2-12a13.q1k vc_5 262 224 5025 5063 C 39 100.00 262 reject_low 6 ALIGNMENT 0 YS2-12a13.q1k vc_7 62 224 13525 13524 F 163 0.00 262 reject_low 7 ALIGNMENT 36 YS2-12a13.q1k vc_5 259 224 1 36 C 36 100.00 262 reject_low 8 ALIGNMENT 0 YS2-12a13.q1k vc_3 222 62 2512 2511 C 161 0.00 262 reject_low 4 ALIGNMENT 40 YS2-12a13.q1k vc_1 262 223 2472 2511 C 40 100.00 262 reject_low 2 ALIGNMENT 38 YS2-12a13.q1k vc_7 225 262 13525 13562 F 38 100.00 262 reject_low 7 ALIGNMENT 156 YS2-12a13.p1k chr01 59 242 10750 10933 F 184 96.20 260 ambiguous_tel 1 ALIGNMENT 0 YS2-12a13.q1k chr01 262 223 10751 10750 C 40 0.00 262 ambiguous_tel 0 ALIGNMENT 0 YS2-12a13.q1k vc_5 223 62 37 36 C 162 0.00 262 reject_low 8 ALIGNMENT 40 YS2-12a13.q1k vc_3 262 223 2472 2511 C 40 100.00 262 reject_low 4 ALIGNMENT 165 YS2-12a13.q1k chr01 222 38 10750 10933 C 185 97.84 262 ambiguous_tel 0 ALIGNMENT 0 YS2-12a13.q1k vc_4 62 222 5832 5831 F 161 0.00 262 reject_low 5 ALIGNMENT 40 YS2-12a13.q1k vc_2 262 223 2105 2144 C 40 100.00 262 reject_low 3 ALIGNMENT 0 YS2-12a13.q1k vc_1 222 62 2512 2511 C 161 0.00 262 reject_low 2 ALIGNMENT 0 YS2-12a13.q1k vc_5 223 62 5064 5063 C 162 0.00 262 reject_low 6 ALIGNMENT 0 YS2-12a13.p1k chr01 243 260 10933 10932 F 18 0.00 260 ambiguous_tel 1 ALIGNMENT 40 YS2-12a13.q1k vc_4 223 262 5832 5871 F 40 100.00 262 reject_low 5 ALIGNMENT 1077 YS2-12a14.p1k chr12 30 1205 461475 462645 F 1176 97.19 1383 reject_bad_break 1 ALIGNMENT 35 YS2-12a14.q1k chr12 79 40 458677 458716 C 40 100.00 1396 reject_bad_break 0 ALIGNMENT 0 YS2-12a14.q1k chr12 107 80 458688 458676 C 28 0.00 1396 reject_bad_break 0 ALIGNMENT 1077 YS2-12a14.p1k chr12 30 1205 452338 453508 F 1176 97.19 1383 reject_bad_break 0 ALIGNMENT 231 YS2-12a14.p1k chr12 30 267 490306 490543 F 238 99.16 1383 reject_low 2 ALIGNMENT 908 YS2-12a14.q1k chr12 1267 108 466673 467824 C 1160 93.45 1396 reject_bad_break 1 ALIGNMENT 908 YS2-12a14.q1k chr12 1267 108 457536 458687 C 1160 93.45 1396 reject_bad_break 0 ALIGNMENT 0 YS2-12a14.q1k chr12 107 80 467825 467813 C 28 0.00 1396 reject_bad_break 1 ALIGNMENT 35 YS2-12a14.q1k chr12 79 40 467814 467853 C 40 100.00 1396 reject_bad_break 1 ALIGNMENT 0 YS2-12a14.p1k chr12 268 924 490543 490542 F 657 0.00 1383 reject_low 2 ALIGNMENT 0 YS2-12a15.q1k chr12 887 832 1067098 1067093 C 56 0.00 1324 reject_low 11 ALIGNMENT 0 YS2-12a15.q1k chr06 442 462 2925 2914 F 21 0.00 1324 reject_low 16 ALIGNMENT 0 YS2-12a15.p1k chr12 131 330 1002320 1002319 F 200 0.00 1311 reject_low 13 ALIGNMENT 0 YS2-12a15.q1k chr08 546 607 3669 3684 F 62 0.00 1324 reject_low 17 ALIGNMENT 29 YS2-12a15.q1k chr05 797 831 4555 4589 F 35 94.29 1324 reject_low 12 ALIGNMENT 53 YS2-12a15.q1k chr16 664 608 944168 944224 C 57 98.25 1324 reject_low 20 ALIGNMENT 52 YS2-12a15.q1k chr08 389 441 3567 3619 F 53 100.00 1324 reject_low 17 ALIGNMENT 0 YS2-12a15.q1k chr16 462 442 944300 944289 C 21 0.00 1324 reject_low 20 ALIGNMENT 0 YS2-12a15.q1k chr13 62 388 3711 3710 F 327 0.00 1324 reject_low 21 ALIGNMENT 53 YS2-12a15.q1k chr13 608 664 3829 3885 F 57 98.25 1324 reject_low 21 ALIGNMENT 0 YS2-12a15.q1k chr02 546 607 4138 4153 F 62 0.00 1324 reject_low 15 ALIGNMENT 0 YS2-12a15.q1k chr12 496 515 3911 3906 F 20 0.00 1324 reject_low 18,19 ALIGNMENT 1011 YS2-12a15.q1k chr12 1285 30 1073271 1074542 C 1256 94.03 1324 reject_low 5 ALIGNMENT 24 YS2-12a15.q1k chr13 516 545 3783 3812 F 30 93.33 1324 reject_low 21 ALIGNMENT 0 YS2-12a15.p1k chr01 202 216 227413 227410 F 15 0.00 1311 reject_low 1 ALIGNMENT 29 YS2-12a15.q1k chr12 831 797 1067094 1067128 C 35 94.29 1324 reject_low 11 ALIGNMENT 53 YS2-12a15.q1k chr08 608 664 3685 3741 F 57 98.25 1324 reject_low 17 ALIGNMENT 988 YS2-12a15.q1k chr16 30 1281 3630 4898 F 1252 93.69 1324 reject_low 10 ALIGNMENT 1035 YS2-12a15.q1k chr09 30 1281 4109 5378 F 1252 94.97 1324 reject_low 2 ALIGNMENT 0 YS2-12a15.q1k chr12 546 607 3937 3952 F 62 0.00 1324 reject_low 18 ALIGNMENT 52 YS2-12a15.q1k chr12 389 441 9370 9422 F 53 100.00 1324 reject_low 14 ALIGNMENT 24 YS2-12a15.q1k chr12 516 545 9442 9471 F 30 93.33 1324 reject_low 14 ALIGNMENT 52 YS2-12a15.q1k chr08 441 389 558743 558795 C 53 100.00 1324 accept_tel 0 ALIGNMENT 0 YS2-12a15.q1k chr13 496 515 3787 3782 F 20 0.00 1324 reject_low 21 ALIGNMENT 0 YS2-12a15.q1k chr05 832 887 4590 4585 F 56 0.00 1324 reject_low 12 ALIGNMENT 24 YS2-12a15.q1k chr02 516 545 4108 4137 F 30 93.33 1324 reject_low 15 ALIGNMENT 0 YS2-12a15.q1k chr12 665 912 9544 9543 F 248 0.00 1324 reject_low 19 ALIGNMENT 0 YS2-12a15.p1k chr12 373 496 1002363 1002509 F 124 0.00 1311 reject_low 13 ALIGNMENT 29 YS2-12a15.q1k chr06 463 495 2915 2947 F 33 96.97 1324 reject_low 16 ALIGNMENT 1035 YS2-12a15.q1k chr10 30 1281 4092 5361 F 1252 94.97 1324 reject_low 3 ALIGNMENT 0 YS2-12a15.q1k chr02 62 388 4036 4035 F 327 0.00 1324 reject_low 15 ALIGNMENT 48 YS2-12a15.p1k chr01 123 201 227329 227412 F 79 87.34 1311 reject_low 1 ALIGNMENT 53 YS2-12a15.q1k chr06 608 664 2990 3046 F 57 98.25 1324 reject_low 16 ALIGNMENT 29 YS2-12a15.q1k chr08 495 463 558720 558752 C 33 96.97 1324 accept_tel 0 ALIGNMENT 0 YS2-12a15.q1k chr06 665 912 3046 3045 F 248 0.00 1324 reject_low 16 ALIGNMENT 49 YS2-12a15.q1k chr13 389 441 3711 3763 F 53 98.11 1324 reject_low 21 ALIGNMENT 29 YS2-12a15.q1k chr12 463 495 9413 9445 F 33 96.97 1324 reject_low 14 ALIGNMENT 203 YS2-12a15.q1k chr12 1281 888 1066690 1067097 C 394 85.03 1324 reject_low 11 ALIGNMENT 0 YS2-12a15.q1k chr02 665 912 4210 4209 F 248 0.00 1324 reject_low 15 ALIGNMENT 52 YS2-12a15.q1k chr16 441 389 944290 944342 C 53 100.00 1324 reject_low 20 ALIGNMENT 28 YS2-12a15.p1k chr12 331 372 1002320 1002362 F 42 90.48 1311 reject_low 13 ALIGNMENT 0 YS2-12a15.q1k chr12 442 462 3888 3877 F 21 0.00 1324 reject_low 18,19 ALIGNMENT 0 YS2-12a15.q1k chr13 665 912 3885 3884 F 248 0.00 1324 reject_low 21 ALIGNMENT 988 YS2-12a15.q1k chr05 1281 30 571902 573170 C 1252 93.53 1324 reject_low 7 ALIGNMENT 1011 YS2-12a15.q1k chr04 1285 30 1527070 1528341 C 1256 94.03 1324 reject_low 4 ALIGNMENT 0 YS2-12a15.q1k chr12 442 462 9423 9412 F 21 0.00 1324 reject_low 14 ALIGNMENT 0 YS2-12a15.q1k chr16 388 62 944343 944342 C 327 0.00 1324 reject_low 20 ALIGNMENT 52 YS2-12a15.q1k chr02 389 441 4036 4088 F 53 100.00 1324 reject_low 15 ALIGNMENT 24 YS2-12a15.q1k chr12 516 545 3907 3936 F 30 93.33 1324 reject_low 18,19 ALIGNMENT 947 YS2-12a15.p1k chr08 63 1267 553928 555121 F 1205 94.19 1311 accept_tel 0 ALIGNMENT 0 YS2-12a15.q1k chr08 388 62 558796 558795 C 327 0.00 1324 accept_tel 0 ALIGNMENT 29 YS2-12a15.q1k chr13 463 495 3754 3786 F 33 96.97 1324 reject_low 21 ALIGNMENT 752 YS2-12a15.p1k chr01 217 1267 227411 228458 F 1051 91.44 1311 reject_low 1 ALIGNMENT 53 YS2-12a15.q1k chr02 608 664 4154 4210 F 57 98.25 1324 reject_low 15 ALIGNMENT 0 YS2-12a15.q1k chr08 496 515 3643 3638 F 20 0.00 1324 reject_low 17 ALIGNMENT 0 YS2-12a15.q1k chr08 462 442 558753 558742 C 21 0.00 1324 accept_tel 0 ALIGNMENT 0 YS2-12a15.q1k chr08 607 546 558678 558693 C 62 0.00 1324 accept_tel 0 ALIGNMENT 29 YS2-12a15.q1k chr12 463 495 3878 3910 F 33 96.97 1324 reject_low 18,19 ALIGNMENT 24 YS2-12a15.q1k chr08 516 545 3639 3668 F 30 93.33 1324 reject_low 17 ALIGNMENT 29 YS2-12a15.q1k chr16 495 463 944267 944299 C 33 96.97 1324 reject_low 20 ALIGNMENT 53 YS2-12a15.q1k chr12 608 664 9488 9544 F 57 98.25 1324 reject_low 19 ALIGNMENT 0 YS2-12a15.q1k chr13 546 607 3813 3828 F 62 0.00 1324 reject_low 21 ALIGNMENT 0 YS2-12a15.q1k chr12 62 388 3835 3834 F 327 0.00 1324 reject_low 18,19 ALIGNMENT 0 YS2-12a15.q1k chr08 442 462 3620 3609 F 21 0.00 1324 reject_low 17 ALIGNMENT 52 YS2-12a15.q1k chr06 389 441 2872 2924 F 53 100.00 1324 reject_low 16 ALIGNMENT 1011 YS2-12a15.q1k chr15 1285 30 1086235 1087506 C 1256 94.03 1324 reject_low 6 ALIGNMENT 0 YS2-12a15.q1k chr16 515 496 944271 944266 C 20 0.00 1324 reject_low 20 ALIGNMENT 0 YS2-12a15.q1k chr08 62 388 3567 3566 F 327 0.00 1324 reject_low 17 ALIGNMENT 24 YS2-12a15.q1k chr16 545 516 944241 944270 C 30 93.33 1324 reject_low 20 ALIGNMENT 53 YS2-12a15.q1k chr12 608 664 3953 4009 F 57 98.25 1324 reject_low 18 ALIGNMENT 0 YS2-12a15.q1k chr12 546 912 9471 9470 F 367 0.00 1324 reject_low 14 ALIGNMENT 0 YS2-12a15.q1k chr02 442 462 4089 4078 F 21 0.00 1324 reject_low 15 ALIGNMENT 988 YS2-12a15.q1k chr07 1281 30 1085979 1087247 C 1252 93.53 1324 reject_low 8 ALIGNMENT 719 YS2-12a15.q1k chr12 781 30 1067125 1067879 C 752 98.80 1324 reject_low 11 ALIGNMENT 318 YS2-12a15.p1k chr12 497 1122 1002510 1003134 F 626 83.71 1311 reject_low 13 ALIGNMENT 52 YS2-12a15.q1k chr12 389 441 3835 3887 F 53 100.00 1324 reject_low 18,19 ALIGNMENT 0 YS2-12a15.q1k chr06 546 607 2974 2989 F 62 0.00 1324 reject_low 16 ALIGNMENT 0 YS2-12a15.q1k chr13 442 462 3764 3753 F 21 0.00 1324 reject_low 21 ALIGNMENT 24 YS2-12a15.q1k chr06 516 545 2944 2973 F 30 93.33 1324 reject_low 16 ALIGNMENT 0 YS2-12a15.q1k chr12 496 515 9446 9441 F 20 0.00 1324 reject_low 14 ALIGNMENT 0 YS2-12a15.q1k chr16 912 665 944169 944168 C 248 0.00 1324 reject_low 20 ALIGNMENT 53 YS2-12a15.q1k chr08 664 608 558621 558677 C 57 98.25 1324 accept_tel 0 ALIGNMENT 0 YS2-12a15.q1k chr12 665 912 4009 4008 F 248 0.00 1324 reject_low 18 ALIGNMENT 0 YS2-12a15.q1k chr08 912 665 558622 558621 C 248 0.00 1324 accept_tel 0 ALIGNMENT 29 YS2-12a15.q1k chr08 463 495 3610 3642 F 33 96.97 1324 reject_low 17 ALIGNMENT 29 YS2-12a15.q1k chr02 463 495 4079 4111 F 33 96.97 1324 reject_low 15 ALIGNMENT 988 YS2-12a15.q1k chr14 30 1281 3721 4989 F 1252 93.69 1324 reject_low 9 ALIGNMENT 0 YS2-12a15.q1k chr06 62 388 2872 2871 F 327 0.00 1324 reject_low 16 ALIGNMENT 0 YS2-12a15.q1k chr05 782 796 4559 4554 F 15 0.00 1324 reject_low 12 ALIGNMENT 0 YS2-12a15.q1k chr16 607 546 944225 944240 C 62 0.00 1324 reject_low 20 ALIGNMENT 24 YS2-12a15.q1k chr08 545 516 558694 558723 C 30 93.33 1324 accept_tel 0 ALIGNMENT 0 YS2-12a15.q1k chr08 665 912 3741 3740 F 248 0.00 1324 reject_low 17 ALIGNMENT 0 YS2-12a15.q1k chr12 796 782 1067129 1067124 C 15 0.00 1324 reject_low 11 ALIGNMENT 667 YS2-12a15.q1k chr05 30 781 3785 4558 F 752 96.54 1324 reject_low 12 ALIGNMENT 0 YS2-12a15.q1k chr08 515 496 558724 558719 C 20 0.00 1324 accept_tel 0 ALIGNMENT 0 YS2-12a15.q1k chr02 496 515 4112 4107 F 20 0.00 1324 reject_low 15 ALIGNMENT 0 YS2-12a15.q1k chr12 62 388 9370 9369 F 327 0.00 1324 reject_low 14 ALIGNMENT 0 YS2-12a15.q1k chr12 546 607 3937 9487 F 62 0.00 1324 reject_low 19 ALIGNMENT 204 YS2-12a15.q1k chr05 888 1281 4586 4993 F 394 85.53 1324 reject_low 12 ALIGNMENT 0 YS2-12a15.q1k chr06 496 515 2948 2943 F 20 0.00 1324 reject_low 16 ALIGNMENT 1077 YS2-12a16.p1k chr12 1285 58 968996 970235 C 1228 97.31 1328 accept 0 ALIGNMENT 1057 YS2-12a16.q1k chr12 39 1243 965192 966411 F 1205 96.93 1378 accept 0 ALIGNMENT 1059 YS2-12a17.q1k chr04 40 1263 55469 56701 F 1224 96.73 1331 accept 0 ALIGNMENT 1030 YS2-12a17.p1k chr04 1317 74 59638 60873 C 1244 95.74 1325 accept 0 ALIGNMENT 1052 YS2-12a18.p1k chr09 32 1321 270219 271511 F 1290 94.65 1321 accept 0 ALIGNMENT 1005 YS2-12a18.q1k chr09 1140 39 275461 276571 C 1102 97.55 1353 accept 0 ALIGNMENT 1049 YS2-12a19.p1k chr14 1273 66 192921 194136 C 1208 97.19 1281 accept 0 ALIGNMENT 1107 YS2-12a19.q1k chr14 38 1307 188991 190266 F 1270 96.38 1345 accept 0 ALIGNMENT 703 YS2-12a20.p1k chr02 336 1160 300165 300999 F 825 95.76 1280 reject_low 1 ALIGNMENT 909 YS2-12a20.q1k chr04 1093 34 474971 476040 C 1060 96.60 1301 accept 0 ALIGNMENT 995 YS2-12a20.p1k chr04 31 1160 471542 472683 F 1130 96.73 1280 accept 0 ALIGNMENT 0 YS2-12a20.p1k chr02 62 335 300165 300164 F 274 0.00 1280 reject_low 1 ALIGNMENT 1016 YS2-12a21.q1k chr04 39 1234 592566 593768 F 1196 95.57 1298 accept 0 ALIGNMENT 960 YS2-12a21.p1k chr04 1216 61 596087 597250 C 1156 95.50 1291 accept 0 ALIGNMENT 0 YS2-12b01.p1k chr13 320 303 642864 642863 C 18 0.00 320 accept 0 ALIGNMENT 257 YS2-12b01.p1k chr13 302 33 642863 643133 C 270 99.26 320 accept 0 ALIGNMENT 149 YS2-12b02.q1k chr13 84 418 279185 279519 F 335 81.79 1363 reject_low 1 ALIGNMENT 1067 YS2-12b02.q1k chr13 31 1263 282040 283282 F 1233 96.27 1363 accept 0 ALIGNMENT 1022 YS2-12b02.p1k chr13 1217 41 284883 286072 C 1177 97.37 1325 accept 0 ALIGNMENT 0 YS2-12b02.q1k chr13 419 868 279519 279518 F 450 0.00 1363 reject_low 1 ALIGNMENT 0 YS2-12b02.q1k chr13 62 83 279185 279184 F 22 0.00 1363 reject_low 1 ALIGNMENT 1023 YS2-12b04.q1k chr09 1150 39 406991 408114 C 1112 98.02 1355 accept 0 ALIGNMENT 980 YS2-12b04.p1k chr09 36 1242 402696 403908 F 1207 94.95 1347 accept 0 ALIGNMENT 998 YS2-12b05.q1k chr11 1103 30 387538 388623 C 1074 98.42 1341 accept 0 ALIGNMENT 934 YS2-12b05.p1k chr11 32 1077 383152 384221 F 1046 97.32 1284 accept 0 ALIGNMENT 926 YS2-12b06.p1k chr12 138 1162 42061 43088 F 1025 97.66 1352 accept 0 ALIGNMENT 1046 YS2-12b06.q1k chr12 1234 39 42210 43419 C 1196 96.57 1402 accept 0 ALIGNMENT 0 YS2-12b07.q1k chr05 875 605 487322 487321 C 271 0.00 1335 reject_low 2 ALIGNMENT 0 YS2-12b07.q1k chr05 601 875 355002 355001 F 275 0.00 1335 reject_low 10 ALIGNMENT 0 YS2-12b07.q1k chr05 62 524 354927 354926 F 463 0.00 1335 reject_low 10 ALIGNMENT 0 YS2-12b07.q1k chr03 526 62 82534 82533 C 465 0.00 1335 reject_low 6 ALIGNMENT 75 YS2-12b07.q1k chr02 523 600 645157 645234 F 78 98.72 1335 reject_low 9 ALIGNMENT 78 YS2-12b07.q1k chr09 523 600 370409 370486 F 78 100.00 1335 reject_low 7 ALIGNMENT 0 YS2-12b07.q1k chr10 522 62 116011 116010 C 461 0.00 1335 reject_low 4 ALIGNMENT 0 YS2-12b07.q1k chr09 62 522 370409 370408 F 461 0.00 1335 reject_low 7 ALIGNMENT 967 YS2-12b07.q1k chr13 30 1151 290301 291428 F 1122 95.99 1335 accept 0 ALIGNMENT 0 YS2-12b07.q1k chr12 600 875 797249 797248 F 276 0.00 1335 reject_low 14 ALIGNMENT 0 YS2-12b07.q1k chr11 524 62 141098 141097 C 463 0.00 1335 reject_low 8 ALIGNMENT 76 YS2-12b07.q1k chr05 525 600 354927 355002 F 76 100.00 1335 reject_low 10 ALIGNMENT 0 YS2-12b07.q1k chr09 601 875 370486 370485 F 275 0.00 1335 reject_low 7 ALIGNMENT 79 YS2-12b07.q1k chr10 607 523 115926 116010 C 85 97.65 1335 reject_low 4 ALIGNMENT 0 YS2-12b07.q1k chr16 527 62 210263 210262 C 466 0.00 1335 reject_low 3 ALIGNMENT 77 YS2-12b07.q1k chr07 612 528 401518 401601 C 85 97.65 1335 reject_low 1 ALIGNMENT 0 YS2-12b07.q1k chr07 610 875 541935 541934 F 266 0.00 1335 reject_low 5 ALIGNMENT 0 YS2-12b07.q1k chr04 875 610 1017193 1017192 C 266 0.00 1335 reject_low 13 ALIGNMENT 0 YS2-12b07.q1k chr02 601 875 645234 645233 F 275 0.00 1335 reject_low 9 ALIGNMENT 77 YS2-12b07.q1k chr11 604 525 141018 141097 C 80 98.75 1335 reject_low 8 ALIGNMENT 0 YS2-12b07.q1k chr07 601 875 328658 328657 F 275 0.00 1335 reject_low 12 ALIGNMENT 0 YS2-12b07.q1k chr02 62 522 645157 645156 F 461 0.00 1335 reject_low 9 ALIGNMENT 1003 YS2-12b07.p1k chr13 1211 29 293580 294783 C 1183 96.03 1330 accept 0 ALIGNMENT 0 YS2-12b07.q1k chr10 875 608 115927 115926 C 268 0.00 1335 reject_low 4 ALIGNMENT 78 YS2-12b07.q1k chr05 604 521 487321 487404 C 84 97.62 1335 reject_low 2 ALIGNMENT 0 YS2-12b07.q1k chr11 875 605 141019 141018 C 271 0.00 1335 reject_low 8 ALIGNMENT 0 YS2-12b07.q1k chr09 601 875 197661 197660 F 275 0.00 1335 reject_low 15 ALIGNMENT 0 YS2-12b07.q1k chr05 601 875 177170 177169 F 275 0.00 1335 reject_low 11 ALIGNMENT 77 YS2-12b07.q1k chr03 609 527 82451 82533 C 83 97.59 1335 reject_low 6 ALIGNMENT 64 YS2-12b07.q1k chr04 609 526 1017192 1017274 C 84 92.86 1335 reject_low 13 ALIGNMENT 0 YS2-12b07.q1k chr07 527 62 401602 401601 C 466 0.00 1335 reject_low 1 ALIGNMENT 0 YS2-12b07.q1k chr09 62 525 197587 197586 F 464 0.00 1335 reject_low 15 ALIGNMENT 0 YS2-12b07.q1k chr04 525 62 1017275 1017274 C 464 0.00 1335 reject_low 13 ALIGNMENT 0 YS2-12b07.q1k chr05 520 62 487405 487404 C 459 0.00 1335 reject_low 2 ALIGNMENT 0 YS2-12b07.q1k chr03 875 610 82452 82451 C 266 0.00 1335 reject_low 6 ALIGNMENT 80 YS2-12b07.q1k chr07 527 609 541853 541935 F 83 98.80 1335 reject_low 5 ALIGNMENT 0 YS2-12b07.q1k chr07 62 526 541853 541852 F 465 0.00 1335 reject_low 5 ALIGNMENT 0 YS2-12b07.q1k chr12 62 527 797178 797177 F 466 0.00 1335 reject_low 14 ALIGNMENT 0 YS2-12b07.q1k chr07 62 527 328586 328585 F 466 0.00 1335 reject_low 12 ALIGNMENT 79 YS2-12b07.q1k chr16 610 528 210180 210262 C 83 98.80 1335 reject_low 3 ALIGNMENT 0 YS2-12b07.q1k chr16 875 611 210181 210180 C 265 0.00 1335 reject_low 3 ALIGNMENT 73 YS2-12b07.q1k chr07 528 600 328586 328658 F 73 100.00 1335 reject_low 12 ALIGNMENT 0 YS2-12b07.q1k chr07 875 613 401519 401518 C 263 0.00 1335 reject_low 1 ALIGNMENT 0 YS2-12b07.q1k chr05 62 526 177097 177096 F 465 0.00 1335 reject_low 11 ALIGNMENT 60 YS2-12b07.q1k chr09 526 600 197587 197661 F 75 93.33 1335 reject_low 15 ALIGNMENT 72 YS2-12b07.q1k chr12 528 599 797178 797249 F 72 100.00 1335 reject_low 14 ALIGNMENT 74 YS2-12b07.q1k chr05 527 600 177097 177170 F 74 100.00 1335 reject_low 11 ALIGNMENT 0 YS2-12b11.q1k vc_3 263 62 2513 2512 C 202 0.00 304 reject_low 4 ALIGNMENT 0 YS2-12b11.q1k chr06 304 264 185212 185211 C 41 0.00 304 accept_chi 0 ALIGNMENT 41 YS2-12b11.q1k vc_2 304 264 2105 2145 C 41 100.00 304 reject_low 3 ALIGNMENT 0 YS2-12b11.q1k vc_4 62 263 5831 5830 F 202 0.00 304 reject_low 5 ALIGNMENT 223 YS2-12b11.q1k chr06 263 38 185211 185436 C 226 100.00 304 accept_chi 0 ALIGNMENT 0 YS2-12b11.q1k vc_7 62 266 13525 13524 F 205 0.00 304 reject_low 7 ALIGNMENT 41 YS2-12b11.q1k vc_4 264 304 5831 5871 F 41 100.00 304 reject_low 5 ALIGNMENT 0 YS2-12b11.q1k vc_5 265 62 5064 5063 C 204 0.00 304 reject_low 6 ALIGNMENT 41 YS2-12b11.q1k vc_3 304 264 2472 2512 C 41 100.00 304 reject_low 4 ALIGNMENT 0 YS2-12b11.p1k chr06 264 281 185436 185435 F 18 0.00 281 accept_chi 1 ALIGNMENT 0 YS2-12b11.q1k vc_5 265 62 37 36 C 204 0.00 304 reject_low 8 ALIGNMENT 38 YS2-12b11.q1k vc_7 267 304 13525 13562 F 38 100.00 304 reject_low 7 ALIGNMENT 0 YS2-12b11.q1k vc_2 263 62 2146 2145 C 202 0.00 304 reject_low 3 ALIGNMENT 219 YS2-12b11.p1k chr06 42 263 185215 185436 F 222 100.00 281 accept_chi 1 ALIGNMENT 39 YS2-12b11.q1k vc_5 304 266 5025 5063 C 39 100.00 304 reject_low 6 ALIGNMENT 36 YS2-12b11.q1k vc_5 301 266 1 36 C 36 100.00 304 reject_low 8 ALIGNMENT 0 YS2-12b11.q1k vc_1 263 62 2513 2512 C 202 0.00 304 reject_low 2 ALIGNMENT 41 YS2-12b11.q1k vc_1 304 264 2472 2512 C 41 100.00 304 reject_low 2 ALIGNMENT 948 YS2-12b12.q1k chr15 1092 32 870043 871119 C 1061 97.93 1381 accept 0 ALIGNMENT 1049 YS2-12b12.p1k chr15 35 1184 865853 867006 F 1150 97.30 1351 accept 0 ALIGNMENT 1047 YS2-12b13.p1k chr16 33 1292 200285 201555 F 1260 94.68 1367 accept 0 ALIGNMENT 1018 YS2-12b13.q1k chr16 1192 31 202637 203811 C 1162 96.90 1359 accept 0 ALIGNMENT 0 YS2-12b14.q1k vc_4 237 62 6340 6339 C 176 0.00 822 reject_low 10 ALIGNMENT 461 YS2-12b14.q1k vc_7 588 1 1968 2569 C 588 93.20 822 reject_vc 2 ALIGNMENT 0 YS2-12b14.q1k vc_4 62 237 1548 1547 F 176 0.00 822 reject_vc 7 ALIGNMENT 372 YS2-12b14.q1k vc_4 409 1 5245 5654 C 409 97.56 822 reject_vc 3 ALIGNMENT 65 YS2-12b14.q1k vc_4 238 304 1548 1614 F 67 100.00 822 reject_vc 7 ALIGNMENT 0 YS2-12b14.p1k chr05 357 375 396417 396416 F 19 0.00 375 accept 0 ALIGNMENT 0 YS2-12b14.q1k vc_7 304 304 4700 4921 C 1 0.00 822 reject_low 8 ALIGNMENT 75 YS2-12b14.q1k vc_7 409 305 4596 4699 C 105 92.38 822 reject_low 8 ALIGNMENT 316 YS2-12b14.p1k chr05 27 356 396088 396417 F 330 100.00 375 accept 0 ALIGNMENT 0 YS2-12b14.q1k vc_4 305 307 1615 1878 F 3 0.00 822 reject_vc 7 ALIGNMENT 0 YS2-12b14.q1k vc_4 237 62 113 112 C 176 0.00 822 reject_low 9 ALIGNMENT 0 YS2-12b14.q1k vc_1 304 333 2991 2990 F 30 0.00 822 reject_vc 4 ALIGNMENT 302 YS2-12b14.q1k vc_3 1 303 2689 2991 F 303 100.00 822 reject_vc 6 ALIGNMENT 51 YS2-12b14.q1k vc_7 54 3 6360 6411 C 52 100.00 822|1,0 reject_low 8 ALIGNMENT 65 YS2-12b14.q1k vc_4 304 238 46 112 C 67 100.00 822 reject_low 9 ALIGNMENT 483 YS2-12b14.q1k vc_5 1 678 2556 3257 F 678 91.30 822 reject_vc 1 ALIGNMENT 302 YS2-12b14.q1k vc_2 1 303 2322 2624 F 303 100.00 822 reject_vc 5 ALIGNMENT 0 YS2-12b14.q1k vc_2 304 333 2624 2623 F 30 0.00 822 reject_vc 5 ALIGNMENT 0 YS2-12b14.q1k vc_7 53 54 5172 6360 C 0 0.00 822 reject_low 8 ALIGNMENT 175 YS2-12b14.q1k vc_4 308 649 1879 2241 F 342 85.38 822 reject_vc 7 ALIGNMENT 0 YS2-12b14.q1k vc_4 333 305 47 46 C 29 0.00 822 reject_low 9 ALIGNMENT 0 YS2-12b14.q1k vc_3 304 333 2991 2990 F 30 0.00 822 reject_vc 6 ALIGNMENT 65 YS2-12b14.q1k vc_4 304 238 6273 6339 C 67 100.00 822 reject_low 10 ALIGNMENT 0 YS2-12b14.q1k vc_4 333 305 6274 6273 C 29 0.00 822 reject_low 10 ALIGNMENT 302 YS2-12b14.q1k vc_1 1 303 2689 2991 F 303 100.00 822 reject_vc 4 ALIGNMENT 247 YS2-12b14.q1k vc_7 303 53 4922 5172 C 251 99.60 822|0,1 reject_low 8 ALIGNMENT 302 YS2-12b16.q1k vc_3 1 303 2689 2991 F 303 100.00 923 reject_low 7 ALIGNMENT 0 YS2-12b16.q1k vc_4 305 307 1615 1878 F 3 0.00 923 reject_vc 3 ALIGNMENT 0 YS2-12b16.q1k vc_4 428 305 47 46 C 124 0.00 923 reject_low 9 ALIGNMENT 637 YS2-12b16.q1k vc_7 814 1 1760 2569 C 814 93.49 923 reject_vc 2 ALIGNMENT 302 YS2-12b16.q1k vc_2 1 303 2322 2624 F 303 100.00 923 reject_low 6 ALIGNMENT 65 YS2-12b16.q1k vc_4 304 238 6273 6339 C 67 100.00 923 reject_low 10 ALIGNMENT 413 YS2-12b16.q1k vc_4 421 1 5232 5654 C 421 99.52 923 reject_low 4 ALIGNMENT 247 YS2-12b16.q1k vc_7 303 53 4922 5172 C 251 99.60 923|0,1 reject_low 8 ALIGNMENT 0 YS2-12b16.q1k vc_3 304 428 2991 2990 F 125 0.00 923 reject_low 7 ALIGNMENT 0 YS2-12b16.q1k vc_4 62 237 1548 1547 F 176 0.00 923 reject_vc 3 ALIGNMENT 0 YS2-12b16.q1k vc_7 304 304 4700 4921 C 1 0.00 923 reject_low 8 ALIGNMENT 65 YS2-12b16.q1k vc_4 238 304 1548 1614 F 67 100.00 923 reject_vc 3 ALIGNMENT 0 YS2-12b16.q1k vc_1 304 428 2991 2990 F 125 0.00 923 reject_low 5 ALIGNMENT 0 YS2-12b16.q1k vc_4 237 62 6340 6339 C 176 0.00 923 reject_low 10 ALIGNMENT 644 YS2-12b16.q1k vc_5 1 894 2556 3447 F 894 91.95 923 reject_vc 1 ALIGNMENT 0 YS2-12b16.q1k vc_7 53 54 5172 6360 C 0 0.00 923 reject_low 8 ALIGNMENT 0 YS2-12b16.q1k vc_2 304 428 2624 2623 F 125 0.00 923 reject_low 6 ALIGNMENT 302 YS2-12b16.q1k vc_1 1 303 2689 2991 F 303 100.00 923 reject_low 5 ALIGNMENT 332 YS2-12b16.q1k vc_4 308 894 1879 2463 F 587 87.56 923 reject_vc 3 ALIGNMENT 0 YS2-12b16.p1k chr13 316 334 48234 48233 F 19 0.00 334 accept 0 ALIGNMENT 0 YS2-12b16.q1k vc_4 237 62 113 112 C 176 0.00 923 reject_low 9 ALIGNMENT 51 YS2-12b16.q1k vc_7 54 3 6360 6411 C 52 100.00 923|1,0 reject_low 8 ALIGNMENT 115 YS2-12b16.q1k vc_7 421 305 4583 4699 C 117 100.00 923 reject_low 8 ALIGNMENT 0 YS2-12b16.q1k vc_4 428 305 6274 6273 C 124 0.00 923 reject_low 10 ALIGNMENT 65 YS2-12b16.q1k vc_4 304 238 46 112 C 67 100.00 923 reject_low 9 ALIGNMENT 223 YS2-12b16.p1k chr13 64 315 47988 48234 F 252 98.02 334 accept 0 ALIGNMENT 827 YS2-12b17.p1k chr12 1286 33 457766 458980 C 1254 91.71 1305 accept 0 ALIGNMENT 1021 YS2-12b17.q1k chr12 40 1260 455219 456456 F 1221 95.90 1387 accept 0 ALIGNMENT 1021 YS2-12b17.q1k chr12 40 1260 464356 465593 F 1221 95.90 1387 accept 1 ALIGNMENT 827 YS2-12b17.p1k chr12 1286 33 466903 468117 C 1254 91.71 1305 accept 1 ALIGNMENT 0 YS2-12b18.q1k vc_5 197 62 5064 5063 C 136 0.00 236 reject_low 5 ALIGNMENT 39 YS2-12b18.q1k vc_5 236 198 5025 5063 C 39 100.00 236 reject_low 5 ALIGNMENT 0 YS2-12b18.q1k vc_5 197 62 37 36 C 136 0.00 236 reject_low 7 ALIGNMENT 41 YS2-12b18.q1k vc_4 196 236 5831 5871 F 41 100.00 236 reject_low 4 ALIGNMENT 41 YS2-12b18.q1k vc_3 236 196 2472 2512 C 41 100.00 236 reject_low 3 ALIGNMENT 157 YS2-12b18.q1k chr09 36 195 157638 157797 F 160 100.00 236 accept_chi 1 ALIGNMENT 0 YS2-12b18.q1k vc_3 195 62 2513 2512 C 134 0.00 236 reject_low 3 ALIGNMENT 0 YS2-12b18.q1k chr09 196 236 157797 157796 F 41 0.00 236 accept_chi 1 ALIGNMENT 41 YS2-12b18.q1k vc_1 236 196 2472 2512 C 41 100.00 236 reject_low 2 ALIGNMENT 158 YS2-12b18.p1k chr09 195 30 157631 157797 C 166 99.40 213 accept_chi 0 ALIGNMENT 38 YS2-12b18.q1k vc_7 199 236 13525 13562 F 38 100.00 236 reject_low 6 ALIGNMENT 0 YS2-12b18.q1k vc_7 62 198 13525 13524 F 137 0.00 236 reject_low 6 ALIGNMENT 0 YS2-12b18.q1k vc_4 62 195 5831 5830 F 134 0.00 236 reject_low 4 ALIGNMENT 36 YS2-12b18.q1k vc_5 233 198 1 36 C 36 100.00 236 reject_low 7 ALIGNMENT 0 YS2-12b18.p1k chr09 213 196 157632 157631 C 18 0.00 213 accept_chi 0 ALIGNMENT 0 YS2-12b18.q1k vc_1 195 62 2513 2512 C 134 0.00 236 reject_low 2 ALIGNMENT 0 YS2-12b19.q1k vc_5 163 62 37 36 C 102 0.00 202 reject_low 7 ALIGNMENT 0 YS2-12b19.q1k vc_5 163 62 5064 5063 C 102 0.00 202 reject_low 5 ALIGNMENT 40 YS2-12b19.q1k vc_2 202 163 2105 2144 C 40 100.00 202 reject_low 2 ALIGNMENT 120 YS2-12b19.q1k chr07 39 162 29573 29696 F 124 100.00 202 accept 0 ALIGNMENT 40 YS2-12b19.q1k vc_3 202 163 2472 2511 C 40 100.00 202 reject_low 3 ALIGNMENT 40 YS2-12b19.q1k vc_1 202 163 2472 2511 C 40 100.00 202 reject_low 1 ALIGNMENT 36 YS2-12b19.q1k vc_5 199 164 1 36 C 36 100.00 202 reject_low 7 ALIGNMENT 0 YS2-12b19.q1k vc_7 62 164 13525 13524 F 103 0.00 202 reject_low 6 ALIGNMENT 38 YS2-12b19.q1k vc_7 165 202 13525 13562 F 38 100.00 202 reject_low 6 ALIGNMENT 0 YS2-12b19.q1k vc_4 62 162 5832 5831 F 101 0.00 202 reject_low 4 ALIGNMENT 40 YS2-12b19.q1k vc_4 163 202 5832 5871 F 40 100.00 202 reject_low 4 ALIGNMENT 0 YS2-12b19.q1k chr07 163 202 29696 29695 F 40 0.00 202 accept 0 ALIGNMENT 0 YS2-12b19.q1k vc_3 162 62 2512 2511 C 101 0.00 202 reject_low 3 ALIGNMENT 39 YS2-12b19.q1k vc_5 202 164 5025 5063 C 39 100.00 202 reject_low 5 ALIGNMENT 0 YS2-12b19.q1k vc_2 162 62 2145 2144 C 101 0.00 202 reject_low 2 ALIGNMENT 0 YS2-12b19.q1k vc_1 162 62 2512 2511 C 101 0.00 202 reject_low 1 ALIGNMENT 0 YS2-12b20.q1k chr15 62 485 228329 228328 F 424 0.00 1384 reject_low 7 ALIGNMENT 0 YS2-12b20.q1k chr06 372 888 143916 143915 F 517 0.00 1384 reject_low 35 ALIGNMENT 0 YS2-12b20.q1k chr11 372 888 163153 163152 F 517 0.00 1384 reject_low 27 ALIGNMENT 0 YS2-12b20.q1k chr09 228 62 197304 197303 C 167 0.00 1384 reject_low 22 ALIGNMENT 0 YS2-12b20.q1k chr11 570 888 74712 74711 F 319 0.00 1384 reject_low 6 ALIGNMENT 0 YS2-12b20.q1k chr14 62 485 102716 102715 F 424 0.00 1384 reject_low 5 ALIGNMENT 77 YS2-12b20.q1k chr15 486 569 487440 487524 F 84 97.62 1384 reject_low 3 ALIGNMENT 0 YS2-12b20.q1k chr13 888 372 362608 362607 C 517 0.00 1384 reject_low 19 ALIGNMENT 85 YS2-12b20.q1k chr13 371 229 362607 362751 C 143 88.81 1384 reject_low 19 ALIGNMENT 0 YS2-12b20.q1k chr09 888 372 197158 197157 C 517 0.00 1384 reject_low 22 ALIGNMENT 0 YS2-12b20.q1k chr06 62 240 158532 158531 F 179 0.00 1384 reject_low 23 ALIGNMENT 0 YS2-12b20.q1k chr14 62 485 632601 632600 F 424 0.00 1384 reject_low 2 ALIGNMENT 0 YS2-12b20.q1k chr10 372 888 483865 483864 F 517 0.00 1384 reject_low 15 ALIGNMENT 0 YS2-12b20.q1k chr16 888 372 804663 804662 C 517 0.00 1384 reject_low 30 ALIGNMENT 971 YS2-12b20.p1k chr16 1108 29 813369 814465 C 1080 97.78 1279 accept_trans 0 ALIGNMENT 0 YS2-12b20.q1k chr03 888 386 151452 151451 C 503 0.00 1384 reject_low 31 ALIGNMENT 46 YS2-12b20.q1k chr06 256 369 138103 138216 F 114 82.46 1384 reject_low 33 ALIGNMENT 88 YS2-12b20.q1k chr16 371 229 850646 850790 C 143 89.51 1384 reject_low 17 ALIGNMENT 0 YS2-12b20.q1k chr03 888 372 168617 168616 C 517 0.00 1384 reject_low 29 ALIGNMENT 0 YS2-12b20.q1k chr12 485 62 976053 976052 C 424 0.00 1384 reject_low 4 ALIGNMENT 89 YS2-12b20.q1k chr16 229 385 776247 776404 F 157 87.90 1384 reject_low 10 ALIGNMENT 0 YS2-12b20.q1k chr03 888 335 142805 142804 C 554 0.00 1384 reject_low 32 ALIGNMENT 0 YS2-12b20.q1k chr07 566 888 731221 731220 F 323 0.00 1384 reject_low 8 ALIGNMENT 88 YS2-12b20.q1k chr13 229 371 196503 196647 F 143 89.51 1384 reject_low 16 ALIGNMENT 0 YS2-12b20.q1k chr06 325 324 137906 143869 F 0 0.00 1384 reject_low 35 ALIGNMENT 0 YS2-12b20.q1k chr03 372 888 151827 151826 F 517 0.00 1384 reject_low 21 ALIGNMENT 31 YS2-12b20.q1k chr03 385 319 151451 151515 C 67 86.57 1384 reject_low 31 ALIGNMENT 0 YS2-12b20.q1k chr06 370 888 138216 138215 F 519 0.00 1384 reject_low 33 ALIGNMENT 0 YS2-12b20.q1k chr06 382 888 158673 158672 F 507 0.00 1384 reject_low 23 ALIGNMENT 46 YS2-12b20.q1k chr06 256 369 143730 143843 F 114 82.46 1384 reject_low 34 ALIGNMENT 0 YS2-12b20.q1k chr03 62 228 151683 151682 F 167 0.00 1384 reject_low 21 ALIGNMENT 0 YS2-12b20.q1k chr13 888 378 372712 372711 C 511 0.00 1384 reject_low 14 ALIGNMENT 79 YS2-12b20.q1k chr09 371 229 197157 197303 C 143 87.41 1384 reject_low 22 ALIGNMENT 0 YS2-12b20.q1k chr16 888 372 850647 850646 C 517 0.00 1384 reject_low 17 ALIGNMENT 0 YS2-12b20.q1k chr13 372 888 196647 196646 F 517 0.00 1384 reject_low 16 ALIGNMENT 0 YS2-12b20.q1k chr15 62 485 487440 487439 F 424 0.00 1384 reject_low 3 ALIGNMENT 0 YS2-12b20.q1k chr06 62 252 137832 137831 F 191 0.00 1384 reject_low 35 ALIGNMENT 0 YS2-12b20.q1k chr16 228 62 850791 850790 C 167 0.00 1384 reject_low 17 ALIGNMENT 0 YS2-12b20.q1k chr03 888 372 124153 124152 C 517 0.00 1384 reject_low 26 ALIGNMENT 0 YS2-12b20.q1k chr16 62 228 776247 776246 F 167 0.00 1384 reject_low 10 ALIGNMENT 0 YS2-12b20.q1k chr05 62 252 176715 176714 F 191 0.00 1384 reject_low 28 ALIGNMENT 0 YS2-12b20.q1k chr06 888 372 161820 161819 C 517 0.00 1384 reject_low 20 ALIGNMENT 79 YS2-12b20.q1k chr14 486 567 632601 632682 F 82 98.78 1384 reject_low 2 ALIGNMENT 90 YS2-12b20.q1k chr13 229 377 184336 184486 F 149 89.26 1384 reject_low 12 ALIGNMENT 35 YS2-12b20.q1k chr06 322 371 143867 143916 F 50 92.00 1384|3,0 reject_low 35 ALIGNMENT 75 YS2-12b20.q1k chr03 486 560 127713 127787 F 75 100.00 1384 reject_low 9 ALIGNMENT 0 YS2-12b20.q1k chr16 386 888 776404 776403 F 503 0.00 1384 reject_low 10 ALIGNMENT 0 YS2-12b20.q1k chr16 376 375 804639 810561 F 0 0.00 1384 accept_trans 0 ALIGNMENT 0 YS2-12b20.q1k chr05 372 888 176834 176833 F 517 0.00 1384 reject_low 28 ALIGNMENT 0 YS2-12b20.q1k chr14 569 888 102798 102797 F 320 0.00 1384 reject_low 5 ALIGNMENT 0 YS2-12b20.q1k chr05 62 228 138388 138387 F 167 0.00 1384 reject_low 25 ALIGNMENT 75 YS2-12b20.q1k chr11 486 569 74629 74712 F 84 96.43 1384 reject_low 6 ALIGNMENT 90 YS2-12b20.q1k chr13 229 377 189918 190068 F 149 89.26 1384 reject_low 13 ALIGNMENT 0 YS2-12b20.q1k chr06 62 255 138103 138102 F 194 0.00 1384 reject_low 33 ALIGNMENT 0 YS2-12b20.q1k chr16 888 382 856225 856224 C 507 0.00 1384 reject_low 11 ALIGNMENT 0 YS2-12b20.q1k chr03 379 888 149793 149792 F 510 0.00 1384 reject_low 24 ALIGNMENT 0 YS2-12b20.q1k chr13 228 62 362752 362751 C 167 0.00 1384 reject_low 19 ALIGNMENT 0 YS2-12b20.q1k chr03 241 62 142899 142898 C 180 0.00 1384 reject_low 32 ALIGNMENT 0 YS2-12b20.q1k chr15 570 888 487524 487523 F 319 0.00 1384 reject_low 3 ALIGNMENT 0 YS2-12b20.q1k chr11 62 243 163023 163022 F 182 0.00 1384 reject_low 27 ALIGNMENT 45 YS2-12b20.q1k chr03 334 242 142804 142898 C 93 86.02 1384 reject_low 32 ALIGNMENT 79 YS2-12b20.q1k chr03 229 371 151683 151827 F 143 87.41 1384 reject_low 21 ALIGNMENT 0 YS2-12b20.q1k chr03 255 62 168734 168733 C 194 0.00 1384 reject_low 29 ALIGNMENT 0 YS2-12b20.q1k chr13 378 888 184486 184485 F 511 0.00 1384 reject_low 12 ALIGNMENT 75 YS2-12b20.q1k chr03 249 378 149662 149793 F 130 88.46 1384 reject_low 24 ALIGNMENT 0 YS2-12b20.q1k chr16 228 62 856379 856378 C 167 0.00 1384 reject_low 11 ALIGNMENT 62 YS2-12b20.q1k chr05 253 371 176715 176834 F 119 86.55 1384 reject_low 28 ALIGNMENT 90 YS2-12b20.q1k chr13 377 229 372711 372861 C 149 89.26 1384 reject_low 14 ALIGNMENT 0 YS2-12b20.q1k chr06 228 62 161964 161963 C 167 0.00 1384 reject_low 20 ALIGNMENT 0 YS2-12b20.q1k chr07 62 485 731142 731141 F 424 0.00 1384 reject_low 8 ALIGNMENT 57 YS2-12b20.q1k chr16 371 256 804662 804779 C 116 85.34 1384 reject_low 30 ALIGNMENT 70 YS2-12b20.q1k chr03 371 229 124152 124296 C 143 85.31 1384 reject_low 26 ALIGNMENT 0 YS2-12b20.q1k chr13 62 228 196503 196502 F 167 0.00 1384 reject_low 16 ALIGNMENT 0 YS2-12b20.q1k chr12 888 569 975971 975970 C 320 0.00 1384 reject_low 4 ALIGNMENT 0 YS2-12b20.q1k chr03 228 62 124297 124296 C 167 0.00 1384 reject_low 26 ALIGNMENT 0 YS2-12b20.q1k chr03 561 888 127787 127786 F 328 0.00 1384 reject_low 9 ALIGNMENT 60 YS2-12b20.q1k chr03 371 256 168616 168733 C 116 86.21 1384 reject_low 29 ALIGNMENT 73 YS2-12b20.q1k chr05 229 371 138388 138532 F 143 86.01 1384 reject_low 25 ALIGNMENT 299 YS2-12b20.q1k chr16 38 378 804304 804641 F 341 98.24 1384|0,3 accept_trans 0 ALIGNMENT 67 YS2-12b20.q1k chr11 244 371 163023 163153 F 128 86.72 1384 reject_low 27 ALIGNMENT 0 YS2-12b20.q1k chr05 372 888 138532 138531 F 517 0.00 1384 reject_low 25 ALIGNMENT 77 YS2-12b20.q1k chr12 568 486 975970 976052 C 83 97.59 1384 reject_low 4 ALIGNMENT 0 YS2-12b20.q1k chr03 62 248 149662 149661 F 187 0.00 1384 reject_low 24 ALIGNMENT 0 YS2-12b20.q1k chr13 62 228 184336 184335 F 167 0.00 1384 reject_low 12 ALIGNMENT 733 YS2-12b20.q1k chr16 373 1222 810559 811417 F 850 96.12 1384|3,0 accept_trans 0 ALIGNMENT 0 YS2-12b20.q1k chr13 228 62 357170 357169 C 167 0.00 1384 reject_low 18 ALIGNMENT 82 YS2-12b20.q1k chr06 371 229 161819 161963 C 143 88.11 1384 reject_low 20 ALIGNMENT 88 YS2-12b20.q1k chr10 229 371 483721 483865 F 143 89.51 1384 reject_low 15 ALIGNMENT 77 YS2-12b20.q1k chr14 486 568 102716 102798 F 83 97.59 1384 reject_low 5 ALIGNMENT 0 YS2-12b20.q1k chr06 888 582 137460 137459 C 307 0.00 1384 reject_low 1 ALIGNMENT 0 YS2-12b20.q1k chr03 318 62 151516 151515 C 257 0.00 1384 reject_low 31 ALIGNMENT 0 YS2-12b20.q1k chr03 62 485 127713 127712 F 424 0.00 1384 reject_low 9 ALIGNMENT 0 YS2-12b20.q1k chr06 62 255 143730 143729 F 194 0.00 1384 reject_low 34 ALIGNMENT 0 YS2-12b20.q1k chr14 568 888 632682 632681 F 321 0.00 1384 reject_low 2 ALIGNMENT 80 YS2-12b20.q1k chr06 581 486 137459 137554 C 96 94.79 1384 reject_low 1 ALIGNMENT 0 YS2-12b20.q1k chr13 378 888 190068 190067 F 511 0.00 1384 reject_low 13 ALIGNMENT 0 YS2-12b20.q1k chr10 62 228 483721 483720 F 167 0.00 1384 reject_low 15 ALIGNMENT 71 YS2-12b20.q1k chr06 241 381 158532 158673 F 141 85.82 1384 reject_low 23 ALIGNMENT 77 YS2-12b20.q1k chr07 486 565 731142 731221 F 80 98.75 1384 reject_low 8 ALIGNMENT 94 YS2-12b20.q1k chr16 381 229 856224 856378 C 153 89.54 1384 reject_low 11 ALIGNMENT 85 YS2-12b20.q1k chr13 371 229 357025 357169 C 143 88.81 1384 reject_low 18 ALIGNMENT 0 YS2-12b20.q1k chr13 888 372 357026 357025 C 517 0.00 1384 reject_low 18 ALIGNMENT 77 YS2-12b20.q1k chr15 486 566 228329 228410 F 81 98.77 1384 reject_low 7 ALIGNMENT 34 YS2-12b20.q1k chr06 253 326 137832 137907 F 74 85.14 1384|0,2 reject_low 35 ALIGNMENT 0 YS2-12b20.q1k chr16 255 62 804780 804779 C 194 0.00 1384 reject_low 30 ALIGNMENT 0 YS2-12b20.q1k chr13 62 228 189918 189917 F 167 0.00 1384 reject_low 13 ALIGNMENT 0 YS2-12b20.q1k chr13 228 62 372862 372861 C 167 0.00 1384 reject_low 14 ALIGNMENT 0 YS2-12b20.q1k chr06 370 888 143843 143842 F 519 0.00 1384 reject_low 34 ALIGNMENT 0 YS2-12b20.q1k chr15 567 888 228410 228409 F 322 0.00 1384 reject_low 7 ALIGNMENT 0 YS2-12b20.q1k chr11 62 485 74629 74628 F 424 0.00 1384 reject_low 6 ALIGNMENT 0 YS2-12b20.q1k chr06 485 62 137555 137554 C 424 0.00 1384 reject_low 1 ALIGNMENT 1020 YS2-12b22.p1k chr02 1218 31 324099 325301 C 1188 96.38 1319 accept 0 ALIGNMENT 1072 YS2-12b22.q1k chr02 40 1291 323949 325209 F 1252 95.93 1345 accept 0 ALIGNMENT 0 YS2-12b23.p1k chr07 591 870 79038 79037 F 280 0.00 1205 reject_low 6 ALIGNMENT 0 YS2-12b23.p1k chr05 62 552 284383 284382 F 491 0.00 1205 reject_low 1 ALIGNMENT 28 YS2-12b23.p1k chr05 553 605 284383 284436 F 53 92.45 1205 reject_low 1 ALIGNMENT 906 YS2-12b23.p1k chr12 1160 30 555903 557005 C 1131 95.14 1205 accept 0 ALIGNMENT 21 YS2-12b23.p1k chr15 538 579 45690 45731 F 42 100.00 1205 reject_low 4 ALIGNMENT 0 YS2-12b23.p1k chr13 591 870 239387 239386 F 280 0.00 1205 reject_low 8 ALIGNMENT 0 YS2-12b23.p1k chr15 580 870 45731 45730 F 291 0.00 1205 reject_low 4 ALIGNMENT 0 YS2-12b23.p1k chr15 547 62 45732 45731 C 486 0.00 1205 reject_low 7 ALIGNMENT 20 YS2-12b23.p1k chr15 588 548 45691 45731 C 41 100.00 1205 reject_low 7 ALIGNMENT 0 YS2-12b23.p1k chr04 540 62 226865 226864 C 479 0.00 1205 reject_low 2 ALIGNMENT 0 YS2-12b23.p1k chr15 870 589 45692 45691 C 282 0.00 1205 reject_low 7 ALIGNMENT 0 YS2-12b23.p1k chr04 62 540 226817 226816 F 479 0.00 1205 reject_low 3 ALIGNMENT 21 YS2-12b23.p1k chr07 539 590 78988 79038 F 52 96.15 1205 reject_low 6 ALIGNMENT 21 YS2-12b23.p1k chr07 590 539 78986 79036 C 52 96.15 1205 reject_low 5 ALIGNMENT 25 YS2-12b23.p1k chr04 590 541 226815 226864 C 50 98.00 1205 reject_low 2 ALIGNMENT 20 YS2-12b23.p1k chr13 557 590 239354 239387 F 34 100.00 1205 reject_low 8 ALIGNMENT 0 YS2-12b23.p1k chr04 870 591 226816 226815 C 280 0.00 1205 reject_low 2 ALIGNMENT 0 YS2-12b23.p1k chr07 870 591 78987 78986 C 280 0.00 1205 reject_low 5 ALIGNMENT 25 YS2-12b23.p1k chr04 541 590 226817 226866 F 50 98.00 1205 reject_low 3 ALIGNMENT 0 YS2-12b23.p1k chr07 62 538 78988 78987 F 477 0.00 1205 reject_low 6 ALIGNMENT 0 YS2-12b23.p1k chr04 591 870 226866 226865 F 280 0.00 1205 reject_low 3 ALIGNMENT 0 YS2-12b23.p1k chr15 62 537 45690 45689 F 476 0.00 1205 reject_low 4 ALIGNMENT 0 YS2-12b23.p1k chr07 538 62 79037 79036 C 477 0.00 1205 reject_low 5 ALIGNMENT 0 YS2-12b23.p1k chr13 62 556 239354 239353 F 495 0.00 1205 reject_low 8 ALIGNMENT 0 YS2-12b23.p1k chr05 606 870 284436 284435 F 265 0.00 1205 reject_low 1 ALIGNMENT 901 YS2-12b23.q1k chr12 40 1185 553392 554550 F 1146 93.80 1280 accept 0 ALIGNMENT 1116 YS2-12c01.q1k chr03 1291 39 17130 18381 C 1253 96.73 1341 ambiguous_tel 0 ALIGNMENT 1048 YS2-12c01.p1k chr04 62 1311 736227 737476 F 1250 96.16 1329 accept 1 ALIGNMENT 956 YS2-12c02.q1k chr04 1157 30 347920 349064 C 1128 97.52 1316 accept 0 ALIGNMENT 1026 YS2-12c02.p1k chr04 38 1217 343549 344719 F 1180 96.36 1377 accept 0 ALIGNMENT 248 YS2-12c03.q1k chr02 293 39 57446 57700 C 255 99.61 332 accept_chi 0 ALIGNMENT 0 YS2-12c03.q1k vc_7 62 294 63 62 F 233 0.00 332 reject_low 7 ALIGNMENT 41 YS2-12c03.q1k vc_1 332 292 2472 2512 C 41 100.00 332 reject_low 2 ALIGNMENT 0 YS2-12c03.q1k vc_2 291 62 2146 2145 C 230 0.00 332 reject_low 3 ALIGNMENT 0 YS2-12c03.q1k vc_5 293 62 37 36 C 232 0.00 332 reject_low 9 ALIGNMENT 233 YS2-12c03.p1k chr02 66 312 57455 57700 F 247 98.79 330 accept_chi 1 ALIGNMENT 39 YS2-12c03.q1k vc_5 332 294 5025 5063 C 39 100.00 332 reject_low 6 ALIGNMENT 0 YS2-12c03.q1k vc_7 62 294 13525 13524 F 233 0.00 332 reject_low 8 ALIGNMENT 41 YS2-12c03.q1k vc_3 332 292 2472 2512 C 41 100.00 332 reject_low 4 ALIGNMENT 36 YS2-12c03.q1k vc_5 329 294 1 36 C 36 100.00 332 reject_low 9 ALIGNMENT 38 YS2-12c03.q1k vc_7 295 332 63 100 F 38 100.00 332 reject_low 7 ALIGNMENT 0 YS2-12c03.p1k chr02 313 330 57700 57699 F 18 0.00 330 accept_chi 1 ALIGNMENT 0 YS2-12c03.q1k vc_5 293 62 5064 5063 C 232 0.00 332 reject_low 6 ALIGNMENT 41 YS2-12c03.q1k vc_4 292 332 5831 5871 F 41 100.00 332 reject_low 5 ALIGNMENT 0 YS2-12c03.q1k vc_3 291 62 2513 2512 C 230 0.00 332 reject_low 4 ALIGNMENT 41 YS2-12c03.q1k vc_2 332 292 2105 2145 C 41 100.00 332 reject_low 3 ALIGNMENT 0 YS2-12c03.q1k vc_4 62 291 5831 5830 F 230 0.00 332 reject_low 5 ALIGNMENT 0 YS2-12c03.q1k chr02 332 294 57447 57446 C 39 0.00 332 accept_chi 0 ALIGNMENT 0 YS2-12c03.q1k vc_1 291 62 2513 2512 C 230 0.00 332 reject_low 2 ALIGNMENT 38 YS2-12c03.q1k vc_7 295 332 13525 13562 F 38 100.00 332 reject_low 8 ALIGNMENT 1068 YS2-12c04.q1k chr03 1215 39 274166 275341 C 1177 97.79 1405 accept 0 ALIGNMENT 1042 YS2-12c04.p1k chr03 29 1241 271567 272792 F 1213 96.29 1340 accept 0 ALIGNMENT 41 YS2-12c05.q1k vc_2 338 298 2105 2145 C 41 100.00 338 reject_low 3 ALIGNMENT 41 YS2-12c05.q1k vc_4 298 338 5831 5871 F 41 100.00 338 reject_low 5 ALIGNMENT 254 YS2-12c05.q1k chr11 38 295 528557 528814 F 258 99.61 338 accept_chi 0 ALIGNMENT 245 YS2-12c05.p1k chr11 289 32 528557 528814 C 258 98.45 307 accept_chi 1 ALIGNMENT 38 YS2-12c05.q1k vc_7 301 338 13525 13562 F 38 100.00 338 reject_low 7 ALIGNMENT 0 YS2-12c05.q1k vc_4 62 297 5831 5830 F 236 0.00 338 reject_low 5 ALIGNMENT 36 YS2-12c05.q1k vc_5 335 300 1 36 C 36 100.00 338 reject_low 8 ALIGNMENT 0 YS2-12c05.q1k vc_1 297 62 2513 2512 C 236 0.00 338 reject_low 2 ALIGNMENT 41 YS2-12c05.q1k vc_3 338 298 2472 2512 C 41 100.00 338 reject_low 4 ALIGNMENT 0 YS2-12c05.q1k vc_7 62 300 13525 13524 F 239 0.00 338 reject_low 7 ALIGNMENT 0 YS2-12c05.q1k vc_5 299 62 5064 5063 C 238 0.00 338 reject_low 6 ALIGNMENT 0 YS2-12c05.q1k vc_5 299 62 37 36 C 238 0.00 338 reject_low 8 ALIGNMENT 0 YS2-12c05.q1k chr11 296 338 528814 528813 F 43 0.00 338 accept_chi 0 ALIGNMENT 0 YS2-12c05.q1k vc_2 297 62 2146 2145 C 236 0.00 338 reject_low 3 ALIGNMENT 41 YS2-12c05.q1k vc_1 338 298 2472 2512 C 41 100.00 338 reject_low 2 ALIGNMENT 0 YS2-12c05.q1k vc_3 297 62 2513 2512 C 236 0.00 338 reject_low 4 ALIGNMENT 39 YS2-12c05.q1k vc_5 338 300 5025 5063 C 39 100.00 338 reject_low 6 ALIGNMENT 0 YS2-12c05.p1k chr11 307 290 528558 528557 C 18 0.00 307 accept_chi 1 ALIGNMENT 65 YS2-12c07.q1k vc_4 238 304 1548 1614 F 67 100.00 847 reject_vc 7 ALIGNMENT 205 YS2-12c07.p1k chr07 77 377 9922 10223 F 301 91.36 395 accept_tel 0 ALIGNMENT 387 YS2-12c07.q1k vc_4 415 1 5239 5654 C 415 98.07 847 reject_vc 3 ALIGNMENT 0 YS2-12c07.q1k vc_7 53 54 5172 6360 C 0 0.00 847 reject_vc 8 ALIGNMENT 0 YS2-12c07.q1k vc_4 305 307 1615 1878 F 3 0.00 847 reject_vc 7 ALIGNMENT 302 YS2-12c07.q1k vc_3 1 303 2689 2991 F 303 100.00 847 reject_vc 6 ALIGNMENT 494 YS2-12c07.q1k vc_5 1 739 2556 3279 F 739 90.53 847 reject_vc 1 ALIGNMENT 0 YS2-12c07.q1k vc_4 62 237 1548 1547 F 176 0.00 847 reject_vc 7 ALIGNMENT 182 YS2-12c07.q1k vc_4 308 739 1879 2295 F 432 83.56 847 reject_vc 7 ALIGNMENT 0 YS2-12c07.q1k vc_4 237 62 113 112 C 176 0.00 847 reject_low 9 ALIGNMENT 65 YS2-12c07.q1k vc_4 304 238 46 112 C 67 100.00 847 reject_low 9 ALIGNMENT 302 YS2-12c07.q1k vc_2 1 303 2322 2624 F 303 100.00 847 reject_vc 5 ALIGNMENT 302 YS2-12c07.q1k vc_1 1 303 2689 2991 F 303 100.00 847 reject_vc 4 ALIGNMENT 0 YS2-12c07.q1k vc_7 304 304 4700 4921 C 1 0.00 847 reject_vc 8 ALIGNMENT 65 YS2-12c07.q1k vc_4 304 238 6273 6339 C 67 100.00 847 reject_low 10 ALIGNMENT 492 YS2-12c07.q1k vc_7 707 1 1878 2569 C 707 91.37 847 reject_vc 2 ALIGNMENT 0 YS2-12c07.p1k chr07 378 395 10223 10222 F 18 0.00 395 accept_tel 0 ALIGNMENT 90 YS2-12c07.q1k vc_7 415 305 4590 4699 C 111 94.59 847 reject_vc 8 ALIGNMENT 51 YS2-12c07.q1k vc_7 54 3 6360 6411 C 52 100.00 847|1,0 reject_vc 8 ALIGNMENT 0 YS2-12c07.q1k vc_4 237 62 6340 6339 C 176 0.00 847 reject_low 10 ALIGNMENT 247 YS2-12c07.q1k vc_7 303 53 4922 5172 C 251 99.60 847|0,1 reject_vc 8 ALIGNMENT 39 YS2-12c08.q1k vc_5 265 227 5025 5063 C 39 100.00 265 reject_vc 4 ALIGNMENT 38 YS2-12c08.q1k vc_7 228 265 13525 13562 F 38 100.00 265 reject_vc 5 ALIGNMENT 0 YS2-12c08.q1k vc_7 62 227 13525 13524 F 166 0.00 265 reject_vc 5 ALIGNMENT 36 YS2-12c08.q1k vc_5 262 227 1 36 C 36 100.00 265 reject_vc 6 ALIGNMENT 41 YS2-12c08.q1k vc_2 265 225 2105 2145 C 41 100.00 265 reject_vc 1 ALIGNMENT 0 YS2-12c08.q1k vc_4 62 224 5831 5830 F 163 0.00 265 reject_vc 3 ALIGNMENT 0 YS2-12c08.q1k vc_1 224 62 2513 2512 C 163 0.00 265 reject_vc 0 ALIGNMENT 41 YS2-12c08.q1k vc_3 265 225 2472 2512 C 41 100.00 265 reject_vc 2 ALIGNMENT 41 YS2-12c08.q1k vc_1 265 225 2472 2512 C 41 100.00 265 reject_vc 0 ALIGNMENT 41 YS2-12c08.q1k vc_4 225 265 5831 5871 F 41 100.00 265 reject_vc 3 ALIGNMENT 0 YS2-12c08.q1k vc_5 226 62 37 36 C 165 0.00 265 reject_vc 6 ALIGNMENT 0 YS2-12c08.q1k vc_5 226 62 5064 5063 C 165 0.00 265 reject_vc 4 ALIGNMENT 0 YS2-12c08.q1k vc_3 224 62 2513 2512 C 163 0.00 265 reject_vc 2 ALIGNMENT 0 YS2-12c08.q1k vc_2 224 62 2146 2145 C 163 0.00 265 reject_vc 1 ALIGNMENT 1048 YS2-12c09.q1k chr04 1232 40 1139885 1141088 C 1193 96.73 1363 accept 0 ALIGNMENT 1002 YS2-12c09.p1k chr04 59 1265 1136822 1138043 F 1207 95.61 1344 accept 0 ALIGNMENT 205 YS2-12c10.p1k scplasm1 1 298 940 1242 F 298 90.94 511 accept 0 ALIGNMENT 646 YS2-12c10.q1k scplasm1 696 36 4312 4972 C 661 100.00 696 accept 0 ALIGNMENT 0 YS2-12c11.q1k vc_2 236 62 2146 2145 C 175 0.00 277 reject_low 3 ALIGNMENT 41 YS2-12c11.q1k vc_4 237 277 5831 5871 F 41 100.00 277 reject_low 5 ALIGNMENT 38 YS2-12c11.q1k vc_7 240 277 13525 13562 F 38 100.00 277 reject_low 7 ALIGNMENT 0 YS2-12c11.q1k vc_4 62 236 5831 5830 F 175 0.00 277 reject_low 5 ALIGNMENT 0 YS2-12c11.q1k vc_7 62 239 13525 13524 F 178 0.00 277 reject_low 7 ALIGNMENT 0 YS2-12c11.q1k vc_5 238 62 5064 5063 C 177 0.00 277 reject_low 6 ALIGNMENT 0 YS2-12c11.q1k vc_3 236 62 2513 2512 C 175 0.00 277 reject_low 4 ALIGNMENT 182 YS2-12c11.q1k chr06 236 40 45796 45992 C 197 97.97 277 accept_chi 0 ALIGNMENT 174 YS2-12c11.p1k chr06 30 224 45799 45993 F 195 96.92 243 accept_chi 1 ALIGNMENT 0 YS2-12c11.p1k chr06 225 243 45993 45992 F 19 0.00 243 accept_chi 1 ALIGNMENT 41 YS2-12c11.q1k vc_1 277 237 2472 2512 C 41 100.00 277 reject_low 2 ALIGNMENT 41 YS2-12c11.q1k vc_2 277 237 2105 2145 C 41 100.00 277 reject_low 3 ALIGNMENT 0 YS2-12c11.q1k vc_5 238 62 37 36 C 177 0.00 277 reject_low 8 ALIGNMENT 41 YS2-12c11.q1k vc_3 277 237 2472 2512 C 41 100.00 277 reject_low 4 ALIGNMENT 0 YS2-12c11.q1k vc_1 236 62 2513 2512 C 175 0.00 277 reject_low 2 ALIGNMENT 36 YS2-12c11.q1k vc_5 274 239 1 36 C 36 100.00 277 reject_low 8 ALIGNMENT 39 YS2-12c11.q1k vc_5 277 239 5025 5063 C 39 100.00 277 reject_low 6 ALIGNMENT 0 YS2-12c11.q1k chr06 277 237 45797 45796 C 41 0.00 277 accept_chi 0 ALIGNMENT 0 YS2-12c12.q1k vc_5 911 846 5026 5025 C 66 0.00 1387 reject_low 15 ALIGNMENT 41 YS2-12c12.q1k vc_1 845 805 2472 2512 C 41 100.00 1387 reject_low 12 ALIGNMENT 0 YS2-12c12.q1k vc_7 62 807 13525 13524 F 746 0.00 1387 reject_low 16 ALIGNMENT 0 YS2-12c12.q1k vc_5 911 843 2 1 C 69 0.00 1387 reject_low 17 ALIGNMENT 0 YS2-12c12.q1k vc_5 62 844 2398 2397 F 783 0.00 1387 reject_low 5 ALIGNMENT 0 YS2-12c12.q1k vc_7 1004 62 6412 6411 C 943 0.00 1387 reject_low 11 ALIGNMENT 0 YS2-12c12.q1k vc_1 911 846 2473 2472 C 66 0.00 1387 reject_low 12 ALIGNMENT 0 YS2-12c12.q1k vc_1 804 62 2513 2512 C 743 0.00 1387 reject_low 12 ALIGNMENT 0 YS2-12c12.q1k vc_7 846 911 13562 13561 F 66 0.00 1387 reject_low 16 ALIGNMENT 0 YS2-12c12.q1k vc_1 62 844 2531 2530 F 783 0.00 1387 reject_low 2 ALIGNMENT 756 YS2-12c12.q1k chr05 805 30 203371 204146 C 776 99.61 1387 accept_chi 1 ALIGNMENT 229 YS2-12c12.q1k vc_4 1194 845 5447 5812 C 350 90.00 1387 reject_low 7 ALIGNMENT 41 YS2-12c12.q1k vc_4 805 845 5831 5871 F 41 100.00 1387 reject_low 9 ALIGNMENT 236 YS2-12c12.q1k vc_1 845 1194 2531 2894 F 350 90.57 1387 reject_low 2 ALIGNMENT 43 YS2-12c12.q1k vc_7 1055 1005 6360 6411 C 51 96.08 1387|1,0 reject_low 11 ALIGNMENT 0 YS2-12c12.q1k vc_4 62 844 126 125 F 783 0.00 1387 reject_low 8 ALIGNMENT 0 YS2-12c12.q1k vc_4 62 804 5831 5830 F 743 0.00 1387 reject_low 9 ALIGNMENT 41 YS2-12c12.q1k vc_3 845 805 2472 2512 C 41 100.00 1387 reject_low 14 ALIGNMENT 0 YS2-12c12.q1k vc_5 806 62 5064 5063 C 745 0.00 1387 reject_low 15 ALIGNMENT 0 YS2-12c12.q1k vc_4 844 62 1535 1534 C 783 0.00 1387 reject_low 10 ALIGNMENT 58 YS2-12c12.q1k vc_7 1194 1054 5019 5172 C 141 82.27 1387|0,1 reject_low 11 ALIGNMENT 236 YS2-12c12.q1k vc_3 845 1194 2531 2894 F 350 90.57 1387 reject_low 4 ALIGNMENT 41 YS2-12c12.q1k vc_2 845 805 2105 2145 C 41 100.00 1387 reject_low 13 ALIGNMENT 0 YS2-12c12.q1k vc_4 846 845 5872 6353 F 0 0.00 1387 reject_low 9 ALIGNMENT 0 YS2-12c12.q1k vc_2 62 844 2164 2163 F 783 0.00 1387 reject_low 3 ALIGNMENT 756 YS2-12c12.p1k chr05 27 802 203371 204146 F 776 99.61 821 accept_chi 0 ALIGNMENT 36 YS2-12c12.q1k vc_5 842 807 1 36 C 36 100.00 1387 reject_low 17 ALIGNMENT 0 YS2-12c12.q1k vc_4 844 62 5813 5812 C 783 0.00 1387 reject_low 7 ALIGNMENT 85 YS2-12c12.q1k vc_4 933 845 1446 1534 C 89 98.88 1387 reject_low 10 ALIGNMENT 236 YS2-12c12.q1k vc_2 845 1194 2164 2527 F 350 90.57 1387 reject_low 3 ALIGNMENT 0 YS2-12c12.q1k vc_3 911 846 2473 2472 C 66 0.00 1387 reject_low 14 ALIGNMENT 236 YS2-12c12.q1k vc_5 845 1194 2398 2761 F 350 90.57 1387 reject_low 5 ALIGNMENT 0 YS2-12c12.q1k vc_3 62 844 2531 2530 F 783 0.00 1387 reject_low 4 ALIGNMENT 139 YS2-12c12.q1k vc_4 845 1005 126 287 F 161 96.27 1387 reject_low 8 ALIGNMENT 0 YS2-12c12.p1k chr05 803 821 204146 204145 F 19 0.00 821 accept_chi 0 ALIGNMENT 39 YS2-12c12.q1k vc_5 845 807 5025 5063 C 39 100.00 1387 reject_low 15 ALIGNMENT 0 YS2-12c12.q1k vc_3 804 62 2513 2512 C 743 0.00 1387 reject_low 14 ALIGNMENT 38 YS2-12c12.q1k vc_7 808 845 13525 13562 F 38 100.00 1387 reject_low 16 ALIGNMENT 236 YS2-12c12.q1k vc_7 1194 845 2364 2727 C 350 90.57 1387 reject_low 6 ALIGNMENT 139 YS2-12c12.q1k vc_4 845 1005 6353 6514 F 161 96.27 1387|1,0 reject_low 9 ALIGNMENT 0 YS2-12c12.q1k vc_7 1054 1055 5172 6360 C 0 0.00 1387 reject_low 11 ALIGNMENT 0 YS2-12c12.q1k vc_5 806 62 37 36 C 745 0.00 1387 reject_low 17 ALIGNMENT 0 YS2-12c12.q1k vc_7 844 62 2728 2727 C 783 0.00 1387 reject_low 6 ALIGNMENT 0 YS2-12c12.q1k chr05 911 806 203372 203371 C 106 0.00 1387 accept_chi 1 ALIGNMENT 0 YS2-12c12.q1k vc_2 911 846 2106 2105 C 66 0.00 1387 reject_low 13 ALIGNMENT 0 YS2-12c12.q1k vc_2 804 62 2146 2145 C 743 0.00 1387 reject_low 13 ALIGNMENT 0 YS2-12c13.q1k vc_4 62 700 5831 5830 F 639 0.00 741 reject_vc 3 ALIGNMENT 0 YS2-12c13.q1k vc_5 702 62 37 36 C 641 0.00 741 reject_vc 6 ALIGNMENT 41 YS2-12c13.q1k vc_2 741 701 2105 2145 C 41 100.00 741 reject_vc 1 ALIGNMENT 0 YS2-12c13.q1k vc_3 700 62 2513 2512 C 639 0.00 741 reject_vc 2 ALIGNMENT 41 YS2-12c13.q1k vc_1 741 701 2472 2512 C 41 100.00 741 reject_vc 0 ALIGNMENT 41 YS2-12c13.q1k vc_3 741 701 2472 2512 C 41 100.00 741 reject_vc 2 ALIGNMENT 0 YS2-12c13.q1k vc_7 62 703 13525 13524 F 642 0.00 741 reject_vc 5 ALIGNMENT 36 YS2-12c13.q1k vc_5 738 703 1 36 C 36 100.00 741 reject_vc 6 ALIGNMENT 39 YS2-12c13.q1k vc_5 741 703 5025 5063 C 39 100.00 741 reject_vc 4 ALIGNMENT 0 YS2-12c13.q1k vc_2 700 62 2146 2145 C 639 0.00 741 reject_vc 1 ALIGNMENT 41 YS2-12c13.q1k vc_4 701 741 5831 5871 F 41 100.00 741 reject_vc 3 ALIGNMENT 0 YS2-12c13.q1k vc_5 702 62 5064 5063 C 641 0.00 741 reject_vc 4 ALIGNMENT 0 YS2-12c13.q1k vc_1 700 62 2513 2512 C 639 0.00 741 reject_vc 0 ALIGNMENT 38 YS2-12c13.q1k vc_7 704 741 13525 13562 F 38 100.00 741 reject_vc 5 ALIGNMENT 0 YS2-12c15.q1k vc_3 213 62 2512 2511 C 152 0.00 253 reject_low 2 ALIGNMENT 0 YS2-12c15.q1k vc_5 214 62 37 36 C 153 0.00 253 reject_low 6 ALIGNMENT 39 YS2-12c15.q1k vc_5 253 215 5025 5063 C 39 100.00 253 reject_low 4 ALIGNMENT 0 YS2-12c15.q1k vc_7 62 215 13525 13524 F 154 0.00 253 reject_low 5 ALIGNMENT 156 YS2-12c15.p1k chr15 24 201 401376 401553 F 178 97.19 220 accept 0 ALIGNMENT 38 YS2-12c15.q1k vc_7 216 253 13525 13562 F 38 100.00 253 reject_low 5 ALIGNMENT 0 YS2-12c15.q1k vc_4 62 213 5832 5831 F 152 0.00 253 reject_low 3 ALIGNMENT 0 YS2-12c15.p1k chr15 202 220 401553 401552 F 19 0.00 220 accept 0 ALIGNMENT 160 YS2-12c15.q1k chr15 215 39 401377 401553 C 177 98.31 253 accept 0 ALIGNMENT 36 YS2-12c15.q1k vc_5 250 215 1 36 C 36 100.00 253 reject_low 6 ALIGNMENT 0 YS2-12c15.q1k chr15 253 216 401378 401377 C 38 0.00 253 accept 0 ALIGNMENT 40 YS2-12c15.q1k vc_4 214 253 5832 5871 F 40 100.00 253 reject_low 3 ALIGNMENT 0 YS2-12c15.q1k vc_5 214 62 5064 5063 C 153 0.00 253 reject_low 4 ALIGNMENT 40 YS2-12c15.q1k vc_1 253 214 2472 2511 C 40 100.00 253 reject_low 1 ALIGNMENT 40 YS2-12c15.q1k vc_3 253 214 2472 2511 C 40 100.00 253 reject_low 2 ALIGNMENT 0 YS2-12c15.q1k vc_1 213 62 2512 2511 C 152 0.00 253 reject_low 1 ALIGNMENT 0 YS2-12c18.q1k chr12 284 245 205847 205846 C 40 0.00 284 accept_chi 1 ALIGNMENT 39 YS2-12c18.q1k vc_5 284 246 5025 5063 C 39 100.00 284 reject_low 5 ALIGNMENT 192 YS2-12c18.p1k chr12 28 244 205846 206063 F 217 97.70 262 accept_chi 0 ALIGNMENT 38 YS2-12c18.q1k vc_7 247 284 13525 13562 F 38 100.00 284 reject_low 6 ALIGNMENT 41 YS2-12c18.q1k vc_4 244 284 5831 5871 F 41 100.00 284 reject_low 4 ALIGNMENT 0 YS2-12c18.q1k vc_1 243 62 2513 2512 C 182 0.00 284 reject_low 2 ALIGNMENT 0 YS2-12c18.p1k chr12 245 262 206063 206062 F 18 0.00 262 accept_chi 0 ALIGNMENT 41 YS2-12c18.q1k vc_3 284 244 2472 2512 C 41 100.00 284 reject_low 3 ALIGNMENT 0 YS2-12c18.q1k vc_5 245 62 37 36 C 184 0.00 284 reject_low 7 ALIGNMENT 0 YS2-12c18.q1k vc_3 243 62 2513 2512 C 182 0.00 284 reject_low 3 ALIGNMENT 36 YS2-12c18.q1k vc_5 281 246 1 36 C 36 100.00 284 reject_low 7 ALIGNMENT 0 YS2-12c18.q1k vc_5 245 62 5064 5063 C 184 0.00 284 reject_low 5 ALIGNMENT 191 YS2-12c18.q1k chr12 244 28 205846 206063 C 217 97.70 284 accept_chi 1 ALIGNMENT 0 YS2-12c18.q1k vc_7 62 246 13525 13524 F 185 0.00 284 reject_low 6 ALIGNMENT 0 YS2-12c18.q1k vc_4 62 243 5831 5830 F 182 0.00 284 reject_low 4 ALIGNMENT 41 YS2-12c18.q1k vc_1 284 244 2472 2512 C 41 100.00 284 reject_low 2 ALIGNMENT 1017 YS2-12c20.p1k chr15 1203 31 925579 926766 C 1173 96.59 1278 accept 0 ALIGNMENT 1030 YS2-12c20.q1k chr15 28 1176 922135 923296 F 1149 97.65 1348 accept 0 ALIGNMENT 1032 YS2-12c21.p1k chr11 1236 74 113394 114560 C 1163 97.42 1261 accept 0 ALIGNMENT 1028 YS2-12c21.q1k chr11 36 1209 113371 114546 F 1174 96.93 1305 accept 0 ALIGNMENT 0 YS2-12c22.q1k vc_4 62 228 5831 5830 F 167 0.00 269 reject_low 6 ALIGNMENT 41 YS2-12c22.q1k vc_3 269 229 2472 2512 C 41 100.00 269 reject_low 5 ALIGNMENT 0 YS2-12c22.q1k chr12 269 229 453629 453628 C 41 0.00 269 reject_low 1 ALIGNMENT 0 YS2-12c22.q1k vc_3 228 62 2513 2512 C 167 0.00 269 reject_low 5 ALIGNMENT 41 YS2-12c22.q1k vc_2 269 229 2105 2145 C 41 100.00 269 reject_low 4 ALIGNMENT 188 YS2-12c22.q1k chr12 228 37 462765 462956 C 192 100.00 269 accept 0 ALIGNMENT 41 YS2-12c22.q1k vc_4 229 269 5831 5871 F 41 100.00 269 reject_low 6 ALIGNMENT 0 YS2-12c22.q1k vc_7 62 231 13525 13524 F 170 0.00 269 reject_low 8 ALIGNMENT 183 YS2-12c22.p1k chr12 32 223 453629 453819 F 192 99.48 241 accept 0 ALIGNMENT 0 YS2-12c22.q1k vc_1 228 62 2513 2512 C 167 0.00 269 reject_low 3 ALIGNMENT 0 YS2-12c22.q1k vc_5 226 62 5068 5067 C 165 0.00 269 reject_low 7 ALIGNMENT 0 YS2-12c22.p1k chr12 224 241 462956 462955 F 18 0.00 241 reject_low 2 ALIGNMENT 38 YS2-12c22.q1k vc_7 232 269 13525 13562 F 38 100.00 269 reject_low 8 ALIGNMENT 183 YS2-12c22.p1k chr12 32 223 462766 462956 F 192 99.48 241 reject_low 2 ALIGNMENT 37 YS2-12c22.q1k vc_5 266 227 1 40 C 40 97.50 269 reject_low 9 ALIGNMENT 0 YS2-12c22.q1k chr12 269 229 462766 462765 C 41 0.00 269 accept 0 ALIGNMENT 0 YS2-12c22.q1k vc_2 228 62 2146 2145 C 167 0.00 269 reject_low 4 ALIGNMENT 188 YS2-12c22.q1k chr12 228 37 453628 453819 C 192 100.00 269 reject_low 1 ALIGNMENT 0 YS2-12c22.p1k chr12 224 241 453819 453818 F 18 0.00 241 accept 0 ALIGNMENT 0 YS2-12c22.q1k vc_5 226 62 41 40 C 165 0.00 269 reject_low 9 ALIGNMENT 40 YS2-12c22.q1k vc_5 269 227 5025 5067 C 43 97.67 269 reject_low 7 ALIGNMENT 41 YS2-12c22.q1k vc_1 269 229 2472 2512 C 41 100.00 269 reject_low 3 ALIGNMENT 0 YS2-12c23.q1k vc_1 459 62 2513 2512 C 398 0.00 500 reject_low 2 ALIGNMENT 36 YS2-12c23.q1k vc_5 497 462 1 36 C 36 100.00 500 reject_low 7 ALIGNMENT 0 YS2-12c23.q1k vc_5 461 62 5064 5063 C 400 0.00 500 reject_low 5 ALIGNMENT 0 YS2-12c23.q1k vc_7 62 462 13525 13524 F 401 0.00 500 reject_low 6 ALIGNMENT 395 YS2-12c23.q1k chr16 459 27 541894 542329 C 433 98.38 500 accept_chi 0 ALIGNMENT 38 YS2-12c23.q1k vc_7 463 500 13525 13562 F 38 100.00 500 reject_low 6 ALIGNMENT 393 YS2-12c23.p1k chr16 64 502 541894 542330 F 439 98.18 520 accept_chi 1 ALIGNMENT 41 YS2-12c23.q1k vc_1 500 460 2472 2512 C 41 100.00 500 reject_low 2 ALIGNMENT 0 YS2-12c23.p1k chr16 503 520 542330 542329 F 18 0.00 520 accept_chi 1 ALIGNMENT 0 YS2-12c23.q1k vc_3 459 62 2513 2512 C 398 0.00 500 reject_low 3 ALIGNMENT 0 YS2-12c23.q1k chr16 500 460 541895 541894 C 41 0.00 500 accept_chi 0 ALIGNMENT 41 YS2-12c23.q1k vc_3 500 460 2472 2512 C 41 100.00 500 reject_low 3 ALIGNMENT 39 YS2-12c23.q1k vc_5 500 462 5025 5063 C 39 100.00 500 reject_low 5 ALIGNMENT 0 YS2-12c23.q1k vc_5 461 62 37 36 C 400 0.00 500 reject_low 7 ALIGNMENT 0 YS2-12c23.q1k vc_4 62 459 5831 5830 F 398 0.00 500 reject_low 4 ALIGNMENT 41 YS2-12c23.q1k vc_4 460 500 5831 5871 F 41 100.00 500 reject_low 4 ALIGNMENT 552 YS2-12c24.q1k chr14 44 907 107173 108034 F 864 88.89 1397 accept 0 ALIGNMENT 0 YS2-12d03.q1k vc_3 341 62 2513 2512 C 280 0.00 382 reject_low 3 ALIGNMENT 41 YS2-12d03.q1k vc_3 382 342 2472 2512 C 41 100.00 382 reject_low 3 ALIGNMENT 38 YS2-12d03.q1k vc_7 345 382 13525 13562 F 38 100.00 382 reject_low 6 ALIGNMENT 0 YS2-12d03.q1k chr11 343 382 298955 298954 F 40 0.00 382 accept_chi 0 ALIGNMENT 0 YS2-12d03.q1k vc_5 343 62 37 36 C 282 0.00 382 reject_low 7 ALIGNMENT 36 YS2-12d03.q1k vc_5 379 344 1 36 C 36 100.00 382 reject_low 7 ALIGNMENT 0 YS2-12d03.p1k chr11 355 337 298651 298650 C 19 0.00 355 accept_chi 1 ALIGNMENT 0 YS2-12d03.q1k vc_4 62 341 5831 5830 F 280 0.00 382 reject_low 4 ALIGNMENT 0 YS2-12d03.q1k vc_7 62 344 13525 13524 F 283 0.00 382 reject_low 6 ALIGNMENT 287 YS2-12d03.p1k chr11 336 34 298650 298951 C 303 99.67 355 accept_chi 1 ALIGNMENT 0 YS2-12d03.q1k vc_1 341 62 2513 2512 C 280 0.00 382 reject_low 2 ALIGNMENT 39 YS2-12d03.q1k vc_5 382 344 5025 5063 C 39 100.00 382 reject_low 5 ALIGNMENT 295 YS2-12d03.q1k chr11 37 342 298650 298955 F 306 100.00 382 accept_chi 0 ALIGNMENT 41 YS2-12d03.q1k vc_4 342 382 5831 5871 F 41 100.00 382 reject_low 4 ALIGNMENT 41 YS2-12d03.q1k vc_1 382 342 2472 2512 C 41 100.00 382 reject_low 2 ALIGNMENT 0 YS2-12d03.q1k vc_5 343 62 5064 5063 C 282 0.00 382 reject_low 5 ALIGNMENT 1010 YS2-12d04.q1k chr07 1201 30 317766 318950 C 1172 97.35 1379 accept 0 ALIGNMENT 967 YS2-12d04.p1k chr07 30 1151 314581 315715 F 1122 96.35 1319 accept 0 ALIGNMENT 65 YS2-12d05.q1k vc_4 304 238 6273 6339 C 67 100.00 1039 reject_low 9 ALIGNMENT 65 YS2-12d05.q1k vc_4 238 304 1548 1614 F 67 100.00 1039 reject_low 2 ALIGNMENT 0 YS2-12d05.q1k vc_4 62 237 1548 1547 F 176 0.00 1039 reject_low 2 ALIGNMENT 244 YS2-12d05.q1k vc_7 303 53 4922 5172 C 251 99.20 1039|0,1 reject_low 7 ALIGNMENT 593 YS2-12d05.q1k vc_5 1 925 2556 3473 F 925 89.73 1039 reject_vc 0 ALIGNMENT 110 YS2-12d05.q1k vc_7 420 305 4583 4699 C 116 99.14 1039 reject_low 7 ALIGNMENT 0 YS2-12d05.q1k vc_4 386 305 47 46 C 82 0.00 1039 reject_low 8 ALIGNMENT 0 YS2-12d05.q1k vc_7 53 54 5172 6360 C 0 0.00 1039 reject_low 7 ALIGNMENT 0 YS2-12d05.q1k vc_2 304 386 2624 2623 F 83 0.00 1039 reject_low 5 ALIGNMENT 298 YS2-12d05.q1k vc_3 1 303 2689 2991 F 303 99.67 1039 reject_low 6 ALIGNMENT 0 YS2-12d05.q1k vc_3 304 386 2991 2990 F 83 0.00 1039 reject_low 6 ALIGNMENT 0 YS2-12d05.q1k vc_1 304 386 2991 2990 F 83 0.00 1039 reject_low 4 ALIGNMENT 576 YS2-12d05.q1k vc_7 784 1 1799 2569 C 784 92.60 1039 reject_low 1 ALIGNMENT 51 YS2-12d05.q1k vc_7 54 3 6360 6411 C 52 100.00 1039|1,0 reject_low 7 ALIGNMENT 0 YS2-12d05.q1k vc_4 237 62 113 112 C 176 0.00 1039 reject_low 8 ALIGNMENT 298 YS2-12d05.q1k vc_2 1 303 2322 2624 F 303 99.67 1039 reject_low 5 ALIGNMENT 0 YS2-12d05.q1k vc_7 304 304 4700 4921 C 1 0.00 1039 reject_low 7 ALIGNMENT 298 YS2-12d05.q1k vc_1 1 303 2689 2991 F 303 99.67 1039 reject_low 4 ALIGNMENT 65 YS2-12d05.q1k vc_4 304 238 46 112 C 67 100.00 1039 reject_low 8 ALIGNMENT 0 YS2-12d05.q1k vc_4 386 305 6274 6273 C 82 0.00 1039 reject_low 9 ALIGNMENT 0 YS2-12d05.q1k vc_4 305 307 1615 1878 F 3 0.00 1039 reject_low 2 ALIGNMENT 285 YS2-12d05.q1k vc_4 308 925 1879 2489 F 618 84.63 1039 reject_low 2 ALIGNMENT 405 YS2-12d05.q1k vc_4 420 1 5232 5654 C 420 99.05 1039 reject_low 3 ALIGNMENT 0 YS2-12d05.q1k vc_4 237 62 6340 6339 C 176 0.00 1039 reject_low 9 ALIGNMENT 802 YS2-12d06.p1k chr06 1071 42 146123 147159 C 1030 93.20 1326 accept 0 ALIGNMENT 819 YS2-12d06.q1k chr06 34 1060 144535 145567 F 1027 95.42 1334 accept 0 ALIGNMENT 976 YS2-12d07.q1k chr11 30 1112 374147 375244 F 1083 98.15 1341 accept 0 ALIGNMENT 869 YS2-12d07.p1k chr11 1019 37 375634 376629 C 983 97.76 1287 accept 0 ALIGNMENT 0 YS2-12d09.p1k scplasm1 584 62 2956 2955 C 523 0.00 1348 accept_chi 1 ALIGNMENT 385 YS2-12d09.q1k scplasm1 1 479 4313 4806 F 479 95.41 718 accept_chi 0 ALIGNMENT 321 YS2-12d09.p1k scplasm1 1168 585 2358 2955 C 584 86.30 1348 accept_chi 1 ALIGNMENT 1046 YS2-12d10.q1k chr14 32 1187 112459 113619 F 1156 97.15 1413 accept 0 ALIGNMENT 1025 YS2-12d10.p1k chr14 1206 30 112461 113631 C 1177 96.52 1374 accept 0 ALIGNMENT 1082 YS2-12d11.q1k chr13 32 1260 335135 336370 F 1229 97.31 1425 accept 0 ALIGNMENT 1046 YS2-12d11.p1k chr13 1240 29 336186 337412 C 1212 96.53 1350 accept 0 ALIGNMENT 118 YS2-12d12.p1k vc_7 1 230 13918 14151 F 230 85.65 347 reject_vc 5 ALIGNMENT 118 YS2-12d12.p1k vc_3 230 1 1516 1749 C 230 85.65 347 reject_vc 1 ALIGNMENT 118 YS2-12d12.p1k vc_5 230 1 4436 4669 C 230 85.65 347 reject_vc 2 ALIGNMENT 118 YS2-12d12.p1k vc_6 1 230 3712 3945 F 230 85.65 347 reject_vc 3 ALIGNMENT 118 YS2-12d12.p1k vc_7 1 230 456 689 F 230 85.65 347 reject_vc 4 ALIGNMENT 118 YS2-12d12.p1k vc_1 230 1 1516 1749 C 230 85.65 347 reject_vc 0 ALIGNMENT 1109 YS2-12d14.p1k chr04 1306 31 748786 750068 C 1276 96.24 1398 accept 0 ALIGNMENT 1047 YS2-12d14.q1k chr04 35 1233 745500 746707 F 1199 96.33 1410 accept 0 ALIGNMENT 980 YS2-12d15.q1k chr11 1161 40 85061 86196 C 1122 97.59 1341 accept 0 ALIGNMENT 956 YS2-12d15.p1k chr11 32 1092 82341 83416 F 1061 97.64 1310 accept 0 ALIGNMENT 1031 YS2-12d16.p1k chr07 32 1205 410572 411763 F 1174 96.42 1352 accept 0 ALIGNMENT 1041 YS2-12d16.q1k chr07 1277 38 413845 415101 C 1240 94.84 1389 accept 0 ALIGNMENT 905 YS2-12d17.q1k chr15 1075 40 793308 794358 C 1036 97.10 1312 accept 0 ALIGNMENT 1014 YS2-12d17.p1k chr15 37 1186 790161 791334 F 1150 97.39 1366 accept 0 ALIGNMENT 0 YS2-12d18.p1k chr08 492 825 104408 104743 F 334 0.00 1379 reject_low 1 ALIGNMENT 1016 YS2-12d18.p1k chr11 31 1168 431224 432366 F 1138 97.01 1379 accept 0 ALIGNMENT 239 YS2-12d18.p1k chr08 826 1167 104744 105088 F 342 90.64 1379 reject_low 1 ALIGNMENT 0 YS2-12d18.p1k chr08 62 341 104259 104258 F 280 0.00 1379 reject_low 1 ALIGNMENT 103 YS2-12d18.p1k chr08 342 491 104259 104407 F 150 90.67 1379 reject_low 1 ALIGNMENT 952 YS2-12d18.q1k chr11 1081 30 434737 435801 C 1052 97.62 1355 accept 0 ALIGNMENT 761 YS2-12d19.q1k chr12 41 830 489754 490543 F 790 98.99 1315 reject_low 2 ALIGNMENT 918 YS2-12d19.q1k chr12 40 1039 460922 461940 F 1000 98.10 1315 accept 1 ALIGNMENT 1055 YS2-12d19.p1k chr12 1270 32 452359 453611 C 1239 95.80 1289 accept 0 ALIGNMENT 918 YS2-12d19.q1k chr12 40 1039 451785 452803 F 1000 98.10 1315 accept 0 ALIGNMENT 1055 YS2-12d19.p1k chr12 1270 32 461496 462748 C 1239 95.80 1289 accept 1 ALIGNMENT 0 YS2-12d19.q1k chr12 831 881 490543 490542 F 51 0.00 1315 reject_low 2 ALIGNMENT 1051 YS2-12d20.p1k chr11 30 1231 350896 352106 F 1202 96.42 1297 accept 0 ALIGNMENT 1083 YS2-12d20.q1k chr11 1262 35 351857 353081 C 1228 97.07 1392 accept 0 ALIGNMENT 1038 YS2-12d22.p1k chr12 30 1270 319503 320746 F 1241 95.25 1278 accept 0 ALIGNMENT 1034 YS2-12d22.q1k chr12 1202 37 323136 324310 C 1166 97.00 1341 accept 0 ALIGNMENT 1073 YS2-12d23.q1k chr04 39 1239 1073842 1075048 F 1201 97.09 1323 accept 0 ALIGNMENT 1056 YS2-12d23.p1k chr04 1189 33 1079009 1080176 C 1157 98.10 1219 accept 0 ALIGNMENT 1023 YS2-12d24.p1k chr04 30 1213 495661 496845 F 1184 97.04 1215 accept 0 ALIGNMENT 1033 YS2-12d24.q1k chr04 1272 40 496821 498069 C 1233 95.86 1319 accept 0 ALIGNMENT 36 YS2-12e01.q1k vc_5 625 590 1 36 C 36 100.00 628 reject_low 8 ALIGNMENT 0 YS2-12e01.q1k vc_5 589 62 37 36 C 528 0.00 628 reject_low 8 ALIGNMENT 0 YS2-12e01.q1k chr04 628 589 129222 129221 C 40 0.00 628 accept_chi 0 ALIGNMENT 39 YS2-12e01.q1k vc_5 628 590 5025 5063 C 39 100.00 628 reject_low 6 ALIGNMENT 40 YS2-12e01.q1k vc_3 628 589 2472 2511 C 40 100.00 628 reject_low 4 ALIGNMENT 40 YS2-12e01.q1k vc_4 589 628 5832 5871 F 40 100.00 628 reject_low 5 ALIGNMENT 535 YS2-12e01.q1k chr04 588 35 129221 129774 C 554 99.46 628 accept_chi 0 ALIGNMENT 0 YS2-12e01.q1k vc_1 588 62 2512 2511 C 527 0.00 628 reject_low 2 ALIGNMENT 0 YS2-12e01.q1k vc_2 588 62 2145 2144 C 527 0.00 628 reject_low 3 ALIGNMENT 0 YS2-12e01.q1k vc_3 588 62 2512 2511 C 527 0.00 628 reject_low 4 ALIGNMENT 0 YS2-12e01.p1k chr04 610 625 129775 129774 F 16 0.00 625 accept_chi 1 ALIGNMENT 40 YS2-12e01.q1k vc_1 628 589 2472 2511 C 40 100.00 628 reject_low 2 ALIGNMENT 38 YS2-12e01.q1k vc_7 591 628 13525 13562 F 38 100.00 628 reject_low 7 ALIGNMENT 531 YS2-12e01.p1k chr04 56 609 129221 129775 F 554 99.28 625 accept_chi 1 ALIGNMENT 40 YS2-12e01.q1k vc_2 628 589 2105 2144 C 40 100.00 628 reject_low 3 ALIGNMENT 0 YS2-12e01.q1k vc_4 62 588 5832 5831 F 527 0.00 628 reject_low 5 ALIGNMENT 0 YS2-12e01.q1k vc_7 62 590 13525 13524 F 529 0.00 628 reject_low 7 ALIGNMENT 0 YS2-12e01.q1k vc_5 589 62 5064 5063 C 528 0.00 628 reject_low 6 ALIGNMENT 899 YS2-12e02.p1k chr11 1070 23 564997 566059 C 1048 95.80 1281 accept 0 ALIGNMENT 937 YS2-12e02.q1k chr11 38 1107 562336 563414 F 1070 96.73 1331 accept 0 ALIGNMENT 39 YS2-12e03.q1k vc_5 240 202 5025 5063 C 39 100.00 240 reject_low 6 ALIGNMENT 0 YS2-12e03.p1k chr04 240 224 1439290 1439289 C 17 0.00 240 accept_chi 1 ALIGNMENT 0 YS2-12e03.q1k vc_1 198 62 2514 2513 C 137 0.00 240 reject_low 2 ALIGNMENT 0 YS2-12e03.q1k vc_3 198 62 2514 2513 C 137 0.00 240 reject_low 4 ALIGNMENT 145 YS2-12e03.q1k chr04 39 199 1439291 1439451 F 161 98.76 240 accept_chi 0 ALIGNMENT 0 YS2-12e03.q1k chr04 200 240 1439451 1439450 F 41 0.00 240 accept_chi 0 ALIGNMENT 143 YS2-12e03.p1k chr04 223 62 1439289 1439450 C 162 98.15 240 accept_chi 1 ALIGNMENT 0 YS2-12e03.q1k vc_5 201 62 5064 5063 C 140 0.00 240 reject_low 6 ALIGNMENT 0 YS2-12e03.q1k vc_7 62 202 13525 13524 F 141 0.00 240 reject_low 7 ALIGNMENT 0 YS2-12e03.q1k vc_4 62 198 5830 5829 F 137 0.00 240 reject_low 5 ALIGNMENT 0 YS2-12e03.q1k vc_2 198 62 2147 2146 C 137 0.00 240 reject_low 3 ALIGNMENT 38 YS2-12e03.q1k vc_7 203 240 13525 13562 F 38 100.00 240 reject_low 7 ALIGNMENT 42 YS2-12e03.q1k vc_1 240 199 2472 2513 C 42 100.00 240 reject_low 2 ALIGNMENT 42 YS2-12e03.q1k vc_4 199 240 5830 5871 F 42 100.00 240 reject_low 5 ALIGNMENT 0 YS2-12e03.q1k vc_5 201 62 37 36 C 140 0.00 240 reject_low 8 ALIGNMENT 36 YS2-12e03.q1k vc_5 237 202 1 36 C 36 100.00 240 reject_low 8 ALIGNMENT 42 YS2-12e03.q1k vc_2 240 199 2105 2146 C 42 100.00 240 reject_low 3 ALIGNMENT 42 YS2-12e03.q1k vc_3 240 199 2472 2513 C 42 100.00 240 reject_low 4 ALIGNMENT 1023 YS2-12e04.q1k chr08 28 1191 514389 515568 F 1164 97.77 1360 accept 0 ALIGNMENT 866 YS2-12e04.p1k chr08 1033 31 518841 519849 C 1003 96.81 1296 accept 0 ALIGNMENT 1023 YS2-12e05.p1k chr08 1294 61 445420 446655 C 1234 95.87 1399 accept 0 ALIGNMENT 1005 YS2-12e05.q1k chr08 31 1195 445401 446576 F 1165 96.91 1333 accept 0 ALIGNMENT 1020 YS2-12e07.p1k chr15 1265 60 786909 788131 C 1206 95.94 1334 accept 0 ALIGNMENT 1063 YS2-12e07.q1k chr15 37 1293 783606 784872 F 1257 96.42 1401 accept 0 ALIGNMENT 955 YS2-12e09.q1k chr16 40 1169 391895 393039 F 1130 95.58 1362 accept 0 ALIGNMENT 1005 YS2-12e09.p1k chr16 1216 63 396635 397795 C 1154 96.71 1349 accept 0 ALIGNMENT 1017 YS2-12e10.p1k chr16 27 1191 276781 277952 F 1165 97.00 1351 accept 0 ALIGNMENT 933 YS2-12e10.q1k chr16 1130 30 279912 281027 C 1101 95.37 1370 accept 0 ALIGNMENT 41 YS2-12e11.q1k vc_1 677 637 2472 2512 C 41 100.00 677 reject_low 2 ALIGNMENT 0 YS2-12e11.q1k vc_3 636 62 2513 2512 C 575 0.00 677 reject_low 3 ALIGNMENT 570 YS2-12e11.q1k chr13 637 38 107422 108020 C 600 99.17 677 accept_chi 0 ALIGNMENT 41 YS2-12e11.q1k vc_4 637 677 5831 5871 F 41 100.00 677 reject_low 4 ALIGNMENT 0 YS2-12e11.q1k chr13 677 638 107423 107422 C 40 0.00 677 accept_chi 0 ALIGNMENT 0 YS2-12e11.q1k vc_7 62 639 13525 13524 F 578 0.00 677 reject_low 6 ALIGNMENT 41 YS2-12e11.q1k vc_3 677 637 2472 2512 C 41 100.00 677 reject_low 3 ALIGNMENT 0 YS2-12e11.p1k chr13 651 669 108020 108019 F 19 0.00 669 accept_chi 1 ALIGNMENT 39 YS2-12e11.q1k vc_5 677 639 5025 5063 C 39 100.00 677 reject_low 5 ALIGNMENT 0 YS2-12e11.q1k vc_5 638 62 5064 5063 C 577 0.00 677 reject_low 5 ALIGNMENT 0 YS2-12e11.q1k vc_5 638 62 37 36 C 577 0.00 677 reject_low 7 ALIGNMENT 0 YS2-12e11.q1k vc_4 62 636 5831 5830 F 575 0.00 677 reject_low 4 ALIGNMENT 38 YS2-12e11.q1k vc_7 640 677 13525 13562 F 38 100.00 677 reject_low 6 ALIGNMENT 0 YS2-12e11.q1k vc_1 636 62 2513 2512 C 575 0.00 677 reject_low 2 ALIGNMENT 36 YS2-12e11.q1k vc_5 674 639 1 36 C 36 100.00 677 reject_low 7 ALIGNMENT 563 YS2-12e11.p1k chr13 56 650 107424 108020 F 595 98.99 669 accept_chi 1 ALIGNMENT 576 YS2-12e12.q1k chr13 638 39 107422 108020 C 600 99.50 638 accept_chi 0 ALIGNMENT 567 YS2-12e12.p1k chr13 31 619 107431 108020 F 589 99.49 638 accept_chi 1 ALIGNMENT 0 YS2-12e12.p1k chr13 620 638 108020 108019 F 19 0.00 638 accept_chi 1 ALIGNMENT 1040 YS2-12e14.q1k chr14 42 1299 320294 321568 F 1258 95.47 1425 accept 0 ALIGNMENT 1065 YS2-12e14.p1k chr14 1228 31 323197 324411 C 1198 96.99 1297 accept 0 ALIGNMENT 1044 YS2-12e17.p1k chr02 28 1259 179453 180692 F 1232 96.10 1267 accept 0 ALIGNMENT 1022 YS2-12e17.q1k chr02 1249 36 182810 184039 C 1214 96.13 1357 accept 0 ALIGNMENT 0 YS2-12e20.p1k chr12 466 62 813896 813895 C 405 0.00 1344 reject_low 1 ALIGNMENT 859 YS2-12e20.q1k chr13 29 997 880385 881368 F 969 97.52 1323 accept 0 ALIGNMENT 124 YS2-12e20.p1k chr12 906 467 813456 813895 C 440 76.82 1344 reject_low 1 ALIGNMENT 1052 YS2-12e20.p1k chr13 1251 32 884001 885230 C 1220 96.31 1344 accept 0 ALIGNMENT 41 YS2-12e21.q1k vc_1 581 541 2472 2512 C 41 100.00 581 reject_low 2 ALIGNMENT 41 YS2-12e21.q1k vc_3 581 541 2472 2512 C 41 100.00 581 reject_low 4 ALIGNMENT 0 YS2-12e21.q1k vc_2 540 62 2146 2145 C 479 0.00 581 reject_low 3 ALIGNMENT 0 YS2-12e21.p1k chr13 532 548 619567 619566 F 17 0.00 548 accept_chi 1 ALIGNMENT 0 YS2-12e21.q1k vc_4 62 540 5831 5830 F 479 0.00 581 reject_low 5 ALIGNMENT 0 YS2-12e21.q1k chr13 581 541 619065 619064 C 41 0.00 581 accept_chi 0 ALIGNMENT 38 YS2-12e21.q1k vc_7 544 581 13525 13562 F 38 100.00 581 reject_low 7 ALIGNMENT 0 YS2-12e21.q1k vc_7 62 543 13525 13524 F 482 0.00 581 reject_low 7 ALIGNMENT 0 YS2-12e21.q1k vc_3 540 62 2513 2512 C 479 0.00 581 reject_low 4 ALIGNMENT 0 YS2-12e21.q1k vc_5 542 62 5064 5063 C 481 0.00 581 reject_low 6 ALIGNMENT 36 YS2-12e21.q1k vc_5 578 543 1 36 C 36 100.00 581 reject_low 8 ALIGNMENT 0 YS2-12e21.q1k vc_5 542 62 37 36 C 481 0.00 581 reject_low 8 ALIGNMENT 0 YS2-12e21.q1k vc_1 540 62 2513 2512 C 479 0.00 581 reject_low 2 ALIGNMENT 41 YS2-12e21.q1k vc_2 581 541 2105 2145 C 41 100.00 581 reject_low 3 ALIGNMENT 39 YS2-12e21.q1k vc_5 581 543 5025 5063 C 39 100.00 581 reject_low 6 ALIGNMENT 41 YS2-12e21.q1k vc_4 541 581 5831 5871 F 41 100.00 581 reject_low 5 ALIGNMENT 476 YS2-12e21.p1k chr13 28 531 619064 619567 F 504 99.21 548 accept_chi 1 ALIGNMENT 484 YS2-12e21.q1k chr13 540 37 619064 619567 C 504 99.80 581 accept_chi 0 ALIGNMENT 41 YS2-12e22.q1k vc_1 413 373 2472 2512 C 41 100.00 413 reject_low 2 ALIGNMENT 0 YS2-12e22.q1k vc_3 372 62 2513 2512 C 311 0.00 413 reject_low 3 ALIGNMENT 0 YS2-12e22.q1k vc_7 62 375 13525 13524 F 314 0.00 413 reject_low 6 ALIGNMENT 39 YS2-12e22.q1k vc_5 413 375 5025 5063 C 39 100.00 413 reject_low 5 ALIGNMENT 0 YS2-12e22.q1k chr07 413 373 866533 866532 C 41 0.00 413 accept_chi 0 ALIGNMENT 0 YS2-12e22.q1k vc_1 372 62 2513 2512 C 311 0.00 413 reject_low 2 ALIGNMENT 41 YS2-12e22.q1k vc_3 413 373 2472 2512 C 41 100.00 413 reject_low 3 ALIGNMENT 333 YS2-12e22.q1k chr07 372 27 866532 866878 C 346 99.42 413 accept_chi 0 ALIGNMENT 0 YS2-12e22.q1k vc_5 374 62 37 36 C 313 0.00 413 reject_low 7 ALIGNMENT 36 YS2-12e22.q1k vc_5 410 375 1 36 C 36 100.00 413 reject_low 7 ALIGNMENT 333 YS2-12e22.p1k chr07 41 385 866534 866878 F 345 99.42 386 accept_chi 1 ALIGNMENT 0 YS2-12e22.q1k vc_4 62 372 5831 5830 F 311 0.00 413 reject_low 4 ALIGNMENT 41 YS2-12e22.q1k vc_4 373 413 5831 5871 F 41 100.00 413 reject_low 4 ALIGNMENT 38 YS2-12e22.q1k vc_7 376 413 13525 13562 F 38 100.00 413 reject_low 6 ALIGNMENT 0 YS2-12e22.q1k vc_5 374 62 5064 5063 C 313 0.00 413 reject_low 5 ALIGNMENT 1048 YS2-12e24.q1k chr15 1222 40 494603 495799 C 1183 96.87 1325 accept 0 ALIGNMENT 992 YS2-12e24.p1k chr15 25 1279 490423 491694 F 1255 94.10 1285 accept 0 ALIGNMENT 0 YS2-12f01.q1k chr14 84 62 96610 96609 C 23 0.00 1381 reject_low 18 ALIGNMENT 190 YS2-12f01.q1k chr08 243 40 85535 85738 C 204 99.02 1381 reject_low 12 ALIGNMENT 0 YS2-12f01.q1k chr02 244 895 36218 36217 F 652 0.00 1381 reject_low 4 ALIGNMENT 0 YS2-12f01.q1k chr07 244 895 931543 931542 F 652 0.00 1381 reject_low 17 ALIGNMENT 0 YS2-12f01.q1k chr07 895 245 110859 110858 C 651 0.00 1381 reject_low 14 ALIGNMENT 196 YS2-12f01.q1k chr02 40 243 36015 36218 F 204 100.00 1381 reject_low 4 ALIGNMENT 196 YS2-12f01.q1k chr13 243 40 503770 503973 C 204 100.00 1381 reject_low 6 ALIGNMENT 0 YS2-12f01.q1k chr08 895 244 85536 85535 C 652 0.00 1381 reject_low 12 ALIGNMENT 185 YS2-12f01.q1k chr07 244 40 110858 111062 C 205 98.05 1381 reject_low 14 ALIGNMENT 176 YS2-12f01.q1k chr04 244 40 437145 437349 C 205 96.59 1381 reject_low 16 ALIGNMENT 0 YS2-12f01.q1k chr14 895 245 96451 96450 C 651 0.00 1381 reject_low 18 ALIGNMENT 980 YS2-12f01.p1k chr10 32 1227 197829 199033 F 1196 95.32 1363 ambiguous_trans 0 ALIGNMENT 0 YS2-12f01.q1k chr02 245 895 643854 643853 F 651 0.00 1381 reject_low 9 ALIGNMENT 198 YS2-12f01.q1k chr10 245 40 197462 197667 C 206 100.00 1381 reject_low 3 ALIGNMENT 0 YS2-12f01.q1k chr09 244 895 197020 197019 F 652 0.00 1381 reject_low 5 ALIGNMENT 0 YS2-12f01.q1k chr13 895 244 503771 503770 C 652 0.00 1381 reject_low 6 ALIGNMENT 0 YS2-12f01.q1k chr13 245 895 808906 808905 F 651 0.00 1381 reject_low 10 ALIGNMENT 0 YS2-12f01.q1k chr16 244 895 443109 443108 F 652 0.00 1381 reject_low 8 ALIGNMENT 0 YS2-12f01.q1k chr05 244 895 354726 354725 F 652 0.00 1381 reject_low 11 ALIGNMENT 191 YS2-12f01.q1k chr13 40 244 808702 808906 F 205 99.02 1381 reject_low 10 ALIGNMENT 169 YS2-12f01.q1k chr07 40 243 931340 931543 F 204 95.59 1381 reject_low 17 ALIGNMENT 977 YS2-12f01.q1k chr16 40 1181 437054 438207 F 1142 97.55 1381 ambiguous_trans 1 ALIGNMENT 971 YS2-12f01.p1k chr08 32 1227 85900 87101 F 1196 94.98 1363 ambiguous_trans 2 ALIGNMENT 0 YS2-12f01.q1k chr04 895 245 437146 437145 C 651 0.00 1381 reject_low 16 ALIGNMENT 146 YS2-12f01.q1k chr14 244 85 96450 96609 C 160 98.12 1381 reject_low 18 ALIGNMENT 0 YS2-12f01.q1k chr14 244 895 632491 632490 F 652 0.00 1381 reject_low 7 ALIGNMENT 193 YS2-12f01.q1k chr16 40 243 442906 443109 F 204 99.51 1381 reject_low 8 ALIGNMENT 191 YS2-12f01.q1k chr02 40 244 643650 643854 F 205 99.02 1381 reject_low 9 ALIGNMENT 0 YS2-12f01.q1k chr15 895 244 703774 703773 C 652 0.00 1381 reject_low 15 ALIGNMENT 0 YS2-12f01.q1k chr14 895 244 561609 561608 C 652 0.00 1381 reject_low 13 ALIGNMENT 187 YS2-12f01.q1k chr14 243 40 561608 561811 C 204 98.53 1381 reject_low 13 ALIGNMENT 0 YS2-12f01.q1k chr10 895 246 197463 197462 C 650 0.00 1381 reject_low 3 ALIGNMENT 986 YS2-12f01.q1k chr10 1181 40 202369 203522 C 1142 97.81 1381 ambiguous_trans 0 ALIGNMENT 193 YS2-12f01.q1k chr14 40 243 632288 632491 F 204 99.51 1381 reject_low 7 ALIGNMENT 184 YS2-12f01.q1k chr15 243 40 703773 703976 C 204 98.04 1381 reject_low 15 ALIGNMENT 190 YS2-12f01.q1k chr05 40 243 354523 354726 F 204 99.02 1381 reject_low 11 ALIGNMENT 196 YS2-12f01.q1k chr09 40 243 196817 197020 F 204 100.00 1381 reject_low 5 ALIGNMENT 974 YS2-12f01.p1k chr16 1227 32 441544 442744 C 1196 95.15 1363 ambiguous_trans 1 ALIGNMENT 977 YS2-12f01.q1k chr08 1181 40 90437 91590 C 1142 97.55 1381 ambiguous_trans 2 ALIGNMENT 889 YS2-12f02.q1k chr16 39 1036 81011 82025 F 998 97.09 1322 accept 0 ALIGNMENT 1010 YS2-12f02.p1k chr16 1237 26 83848 85072 C 1212 94.72 1349 accept 0 ALIGNMENT 277 YS2-12f03.p1k chr16 31 312 701688 701969 F 282 99.65 1344 reject_low 1 ALIGNMENT 942 YS2-12f03.p1k chr02 31 1117 478761 479849 F 1087 95.86 1344 accept 0 ALIGNMENT 948 YS2-12f03.q1k chr02 1113 40 483223 484311 C 1074 97.58 1347 accept 0 ALIGNMENT 0 YS2-12f03.p1k chr16 313 871 701969 701968 F 559 0.00 1344 reject_low 1 ALIGNMENT 1032 YS2-12f04.p1k chr13 1175 33 866807 867954 C 1143 97.11 1360 accept 0 ALIGNMENT 1011 YS2-12f04.q1k chr13 40 1220 864045 865237 F 1181 96.10 1406 accept 0 ALIGNMENT 999 YS2-12f05.q1k chr14 35 1175 255706 256857 F 1141 97.11 1371 accept 0 ALIGNMENT 948 YS2-12f05.p1k chr14 1090 30 258764 259832 C 1061 97.27 1364 accept 0 ALIGNMENT 154 YS2-12f06.p1k chr07 196 35 233756 233917 C 162 99.38 215 accept 0 ALIGNMENT 0 YS2-12f06.p1k chr07 215 197 233757 233756 C 19 0.00 215 accept 0 ALIGNMENT 943 YS2-12f07.q1k chr13 37 1130 255797 256905 F 1094 97.26 1344 accept 0 ALIGNMENT 978 YS2-12f07.p1k chr13 1210 63 259298 260461 C 1148 96.25 1410 accept 0 ALIGNMENT 272 YS2-12f08.q1k chr11 685 195 283612 284102 C 491 85.34 1395 reject_low 1 ALIGNMENT 1081 YS2-12f08.q1k chr16 1174 37 464661 465805 C 1138 98.68 1395 accept 0 ALIGNMENT 0 YS2-12f08.q1k chr11 908 686 283613 283612 C 223 0.00 1395 reject_low 1 ALIGNMENT 924 YS2-12f08.p1k chr16 28 1107 460582 461676 F 1080 96.48 1321 accept 0 ALIGNMENT 0 YS2-12f08.q1k chr11 194 62 284103 284102 C 133 0.00 1395 reject_low 1 ALIGNMENT 949 YS2-12f09.p1k chr11 1120 30 231061 232165 C 1091 96.61 1321 accept_chi 0 ALIGNMENT 392 YS2-12f09.q1k scplasm1 434 34 4312 4712 C 401 100.00 434 accept_chi 1 ALIGNMENT 138 YS2-12f10.p1k chr12 785 1089 451419 451752 F 305 85.25 1361 reject_low 1 ALIGNMENT 0 YS2-12f10.p1k chr12 62 784 451419 451418 F 723 0.00 1361 reject_low 1 ALIGNMENT 960 YS2-12f10.q1k chr12 1090 38 454008 455072 C 1053 97.44 1350 reject_low 1 ALIGNMENT 832 YS2-12f10.p1k chr12 31 1089 459798 460889 F 1059 95.09 1361 accept 0 ALIGNMENT 960 YS2-12f10.q1k chr12 1090 38 463145 464209 C 1053 97.44 1350 accept 0 ALIGNMENT 1020 YS2-12f11.q1k chr02 1196 39 442708 443876 C 1158 97.75 1384 accept 0 ALIGNMENT 937 YS2-12f11.p1k chr02 29 1118 438698 439801 F 1090 97.25 1344 accept 0 ALIGNMENT 985 YS2-12f12.p1k chr03 1180 30 164331 165504 C 1151 96.44 1371 accept 0 ALIGNMENT 930 YS2-12f12.q1k chr03 30 1090 160354 161430 F 1061 96.89 1348 accept 0 ALIGNMENT 1054 YS2-12f15.q1k chr12 1224 40 741629 742825 C 1185 97.22 1400 accept 0 ALIGNMENT 1065 YS2-12f15.p1k chr12 31 1294 738281 739557 F 1264 95.73 1367 accept 0 ALIGNMENT 33 YS2-12f16.p1k chrm 821 780 10739 10780 C 42 92.86 1519 reject_low 8 ALIGNMENT 25 YS2-12f16.q1k chr07 799 858 404797 404856 F 60 86.67 1431 reject_low 3 ALIGNMENT 0 YS2-12f16.p1k chrm 779 227 10781 10780 C 553 0.00 1519 reject_low 8 ALIGNMENT 40 YS2-12f16.p1k chrm 829 763 76580 76646 C 67 88.06 1519 reject_low 6 ALIGNMENT 0 YS2-12f16.p1k chrm 771 227 34330 34329 C 545 0.00 1519 reject_low 7 ALIGNMENT 799 YS2-12f16.q1k chrm 30 1199 41971 43142 F 1170 94.53 1431 accept 0 ALIGNMENT 110 YS2-12f16.p1k chrm 735 594 44058 44199 C 142 98.59 1519 reject_low 1 ALIGNMENT 0 YS2-12f16.p1k chrm 756 227 80562 80561 C 530 0.00 1519 reject_low 5 ALIGNMENT 31 YS2-12f16.p1k chrm 816 772 83052 83096 C 45 91.11 1519 reject_low 9 ALIGNMENT 28 YS2-12f16.q1k chr01 799 858 189210 189269 F 60 88.33 1431 reject_low 2 ALIGNMENT 0 YS2-12f16.p1k chrm 771 227 83097 83096 C 545 0.00 1519 reject_low 9 ALIGNMENT 55 YS2-12f16.q1k chr07 887 967 404854 404933 F 81 95.06 1431 reject_low 3 ALIGNMENT 0 YS2-12f16.p1k chrm 762 227 76647 76646 C 536 0.00 1519 reject_low 6 ALIGNMENT 448 YS2-12f16.p1k chrm 1121 226 43675 44612 C 896 89.73 1519 accept 0 ALIGNMENT 38 YS2-12f16.p1k chrm 826 773 34922 34976 C 54 90.74 1519 reject_low 1 ALIGNMENT 0 YS2-12f16.p1k chrm 772 736 34977 44057 C 37 0.00 1519 reject_low 1 ALIGNMENT 0 YS2-12f16.p1k chrm 843 827 34923 34922 C 17 0.00 1519 reject_low 1 ALIGNMENT 0 YS2-12f16.p1k chrm 593 593 44200 44245 C 1 0.00 1519 reject_low 1 ALIGNMENT 0 YS2-12f16.p1k chrm 843 817 83053 83052 C 27 0.00 1519 reject_low 9 ALIGNMENT 0 YS2-12f16.q1k chr01 62 798 189210 189209 F 737 0.00 1431 reject_low 2 ALIGNMENT 35 YS2-12f16.p1k chrm 781 852 9498 9568 F 72 84.72 1519 reject_low 4 ALIGNMENT 0 YS2-12f16.p1k chrm 227 780 9498 9497 F 554 0.00 1519 reject_low 4 ALIGNMENT 0 YS2-12f16.q1k chr01 859 886 189270 189266 F 28 0.00 1431 reject_low 2 ALIGNMENT 42 YS2-12f16.p1k chrm 833 757 80484 80561 C 77 85.71 1519 reject_low 5 ALIGNMENT 0 YS2-12f16.p1k chrm 843 821 34282 34281 C 23 0.00 1519 reject_low 7 ALIGNMENT 33 YS2-12f16.p1k chrm 820 772 34281 34329 C 49 89.80 1519 reject_low 7 ALIGNMENT 0 YS2-12f16.q1k chr07 859 886 404857 404853 F 28 0.00 1431 reject_low 3 ALIGNMENT 291 YS2-12f16.p1k chrm 592 157 44246 44680 C 436 94.50 1519 reject_low 1 ALIGNMENT 55 YS2-12f16.q1k chr01 887 967 189267 189346 F 81 95.06 1431 reject_low 2 ALIGNMENT 0 YS2-12f16.q1k chr07 62 798 404797 404796 F 737 0.00 1431 reject_low 3 ALIGNMENT 0 YS2-12f16.p1k chrm 843 822 10740 10739 C 22 0.00 1519 reject_low 8 ALIGNMENT 1005 YS2-12f17.q1k chr13 1169 40 844501 845645 C 1130 97.26 1369 accept 0 ALIGNMENT 961 YS2-12f17.p1k chr13 33 1168 844087 845235 F 1136 95.86 1306 accept 0 ALIGNMENT 0 YS2-12f18.p1k chr15 507 62 938120 938119 C 446 0.00 1319 reject_low 2 ALIGNMENT 22 YS2-12f18.p1k chr15 542 508 938085 938119 C 35 88.57 1319 reject_low 2 ALIGNMENT 0 YS2-12f18.p1k chr15 878 321 937864 937863 C 558 0.00 1319 reject_low 1 ALIGNMENT 0 YS2-12f18.p1k chr15 878 543 938086 938085 C 336 0.00 1319 reject_low 2 ALIGNMENT 970 YS2-12f18.q1k chr15 31 1144 936380 937505 F 1114 96.95 1348 accept 0 ALIGNMENT 0 YS2-12f18.q1k chr04 490 62 747561 747560 C 429 0.00 1348 reject_low 3 ALIGNMENT 20 YS2-12f18.q1k chr02 489 517 464002 464030 F 29 93.10 1348 reject_low 4 ALIGNMENT 0 YS2-12f18.q1k chr02 900 518 780390 780389 C 383 0.00 1348 reject_low 5 ALIGNMENT 23 YS2-12f18.p1k chr15 320 286 937863 937897 C 35 88.57 1319 reject_low 1 ALIGNMENT 0 YS2-12f18.q1k chr02 518 900 464030 464029 F 383 0.00 1348 reject_low 4 ALIGNMENT 0 YS2-12f18.q1k chr04 900 531 747522 747521 C 370 0.00 1348 reject_low 3 ALIGNMENT 20 YS2-12f18.q1k chr02 517 491 780389 780415 C 27 100.00 1348 reject_low 5 ALIGNMENT 0 YS2-12f18.q1k chr02 62 488 464002 464001 F 427 0.00 1348 reject_low 4 ALIGNMENT 0 YS2-12f18.p1k chr15 285 62 937898 937897 C 224 0.00 1319 reject_low 1 ALIGNMENT 0 YS2-12f18.q1k chr02 494 62 505222 505221 C 433 0.00 1348 reject_low 6 ALIGNMENT 0 YS2-12f18.q1k chr02 900 519 505199 505198 C 382 0.00 1348 reject_low 6 ALIGNMENT 20 YS2-12f18.q1k chr02 518 495 505198 505221 C 24 100.00 1348 reject_low 6 ALIGNMENT 1007 YS2-12f18.p1k chr15 1151 27 937243 938378 C 1125 97.07 1319 accept 0 ALIGNMENT 21 YS2-12f18.q1k chr04 530 491 747521 747560 C 40 87.50 1348 reject_low 3 ALIGNMENT 0 YS2-12f18.q1k chr02 490 62 780416 780415 C 429 0.00 1348 reject_low 5 ALIGNMENT 0 YS2-12f20.q1k chr16 867 86 210183 210182 C 782 0.00 1326 reject_low 7 ALIGNMENT 954 YS2-12f20.p1k chr09 1161 32 202414 203559 C 1130 95.66 1314 accept 0 ALIGNMENT 0 YS2-12f20.q1k chr11 867 95 141007 141006 C 773 0.00 1326 reject_low 3 ALIGNMENT 34 YS2-12f20.q1k chr16 85 39 210182 210228 C 47 91.49 1326 reject_low 7 ALIGNMENT 33 YS2-12f20.q1k chr11 94 39 141006 141060 C 56 89.29 1326 reject_low 3 ALIGNMENT 0 YS2-12f20.q1k chr05 86 867 177178 177177 F 782 0.00 1326 reject_low 6 ALIGNMENT 37 YS2-12f20.q1k chr10 87 39 115924 115971 C 49 93.88 1326 reject_low 5 ALIGNMENT 0 YS2-12f20.q1k chr09 99 867 370505 370504 F 769 0.00 1326 reject_low 2 ALIGNMENT 34 YS2-12f20.q1k chr05 39 85 177132 177178 F 47 91.49 1326 reject_low 6 ALIGNMENT 43 YS2-12f20.q1k chr04 88 38 1017188 1017239 C 51 96.08 1326 reject_low 1 ALIGNMENT 34 YS2-12f20.q1k chr07 39 82 328620 328663 F 44 93.18 1326 reject_low 8 ALIGNMENT 40 YS2-12f20.q1k chr02 39 85 645196 645242 F 47 95.74 1326 reject_low 4 ALIGNMENT 0 YS2-12f20.q1k chr04 867 89 1017189 1017188 C 779 0.00 1326 reject_low 1 ALIGNMENT 0 YS2-12f20.q1k chr02 86 867 645242 645241 F 782 0.00 1326 reject_low 4 ALIGNMENT 0 YS2-12f20.q1k chr07 83 867 328663 328662 F 785 0.00 1326 reject_low 8 ALIGNMENT 958 YS2-12f20.q1k chr09 38 1115 197622 198716 F 1078 96.57 1326 accept 0 ALIGNMENT 0 YS2-12f20.q1k chr10 867 88 115925 115924 C 780 0.00 1326 reject_low 5 ALIGNMENT 32 YS2-12f20.q1k chr09 39 98 370448 370505 F 60 88.33 1326 reject_low 2 ALIGNMENT 0 YS2-12f21.p1k chrm 74 353 11096 11095 F 280 0.00 353 reject_low 15 ALIGNMENT 0 YS2-12f21.q1k chrm 378 338 53831 53830 C 41 0.00 378 reject_low 9,18 ALIGNMENT 49 YS2-12f21.q1k chrm 257 337 9445 9528 F 81 87.65 378 reject_low 6 ALIGNMENT 0 YS2-12f21.q1k chrm 293 62 34334 34333 C 232 0.00 378 reject_low 23 ALIGNMENT 0 YS2-12f21.q1k vc_7 62 340 13525 13524 F 279 0.00 378 reject_low 5 ALIGNMENT 0 YS2-12f21.q1k vc_4 62 337 5831 5830 F 276 0.00 378 reject_low 4 ALIGNMENT 0 YS2-12f21.p1k chrm 66 353 52813 52812 F 288 0.00 353 reject_low 21 ALIGNMENT 0 YS2-12f21.q1k chrm 290 62 8286 8285 C 229 0.00 378 reject_low 13 ALIGNMENT 0 YS2-12f21.p1k chrm 86 353 50172 50171 F 268 0.00 353 reject_low 9 ALIGNMENT 0 YS2-12f21.q1k vc_3 337 62 2513 2512 C 276 0.00 378 reject_low 3 ALIGNMENT 0 YS2-12f21.q1k chrm 378 338 76599 76598 C 41 0.00 378 reject_low 10,11 ALIGNMENT 32 YS2-12f21.p1k chrm 30 76 69449 69495 F 47 93.62 353 reject_low 10 ALIGNMENT 39 YS2-12f21.q1k chrm 337 294 11509 11552 C 44 100.00 378 reject_low 12,15 ALIGNMENT 38 YS2-12f21.q1k vc_7 341 378 13525 13562 F 38 100.00 378 reject_low 5 ALIGNMENT 272 YS2-12f21.q1k chrm 31 337 75353 75659 F 307 100.00 378 accept_chi 0 ALIGNMENT 0 YS2-12f21.p1k chrm 353 87 31021 31020 C 267 0.00 353 reject_low 27 ALIGNMENT 35 YS2-12f21.p1k chrm 30 85 50116 50172 F 56 89.29 353 reject_low 9 ALIGNMENT 0 YS2-12f21.p1k chrm 353 72 71209 71208 C 282 0.00 353 reject_low 28 ALIGNMENT 0 YS2-12f21.q1k chrm 296 62 81448 81447 C 235 0.00 378 reject_low 17 ALIGNMENT 0 YS2-12f21.q1k chrm 290 62 80553 80552 C 229 0.00 378 reject_low 14 ALIGNMENT 0 YS2-12f21.q1k chrm 298 62 62904 62903 C 237 0.00 378 reject_low 20,21 ALIGNMENT 0 YS2-12f21.p1k chrm 66 353 3101 3100 F 288 0.00 353 reject_low 13 ALIGNMENT 44 YS2-12f21.q1k chrm 337 291 8239 8285 C 47 100.00 378 reject_low 13 ALIGNMENT 0 YS2-12f21.q1k chrm 378 338 52776 52775 C 41 0.00 378 reject_low 26 ALIGNMENT 0 YS2-12f21.q1k chrm 378 338 2099 2098 C 41 0.00 378 reject_low 24 ALIGNMENT 33 YS2-12f21.q1k chrm 337 299 2098 2136 C 39 100.00 378 reject_low 24 ALIGNMENT 0 YS2-12f21.q1k chrm 290 62 76645 76644 C 229 0.00 378 reject_low 10,11 ALIGNMENT 0 YS2-12f21.p1k chrm 74 353 80552 80551 F 280 0.00 353 reject_low 17 ALIGNMENT 0 YS2-12f21.q1k chrm 378 338 81408 81407 C 41 0.00 378 reject_low 17 ALIGNMENT 35 YS2-12f21.q1k chrm 337 297 83057 83097 C 41 100.00 378 reject_low 16 ALIGNMENT 23 YS2-12f21.p1k chrm 31 60 73018 73047 F 30 100.00 353 reject_low 14 ALIGNMENT 0 YS2-12f21.q1k chrm 378 338 34291 34290 C 41 0.00 378 reject_low 23 ALIGNMENT 24 YS2-12f21.p1k chrm 30 65 53832 53868 F 36 97.22 353 reject_low 20 ALIGNMENT 0 YS2-12f21.q1k chrm 338 378 123 122 F 41 0.00 378 reject_low 19 ALIGNMENT 0 YS2-12f21.q1k chrm 62 256 9445 9444 F 195 0.00 378 reject_low 6 ALIGNMENT 0 YS2-12f21.q1k chrm 293 62 11553 11552 C 232 0.00 378 reject_low 12,15 ALIGNMENT 0 YS2-12f21.q1k chrm 62 290 2743 2742 F 229 0.00 378 reject_low 22 ALIGNMENT 31 YS2-12f21.p1k chrm 30 79 81409 81457 F 50 92.00 353 reject_low 16 ALIGNMENT 0 YS2-12f21.p1k chrm 353 80 52320 52319 C 274 0.00 353 reject_low 7 ALIGNMENT 31 YS2-12f21.p1k chrm 30 126 11511 11613 F 97 80.41 353 reject_low 8 ALIGNMENT 31 YS2-12f21.p1k chrm 30 73 66832 66876 F 44 93.18 353 reject_low 11 ALIGNMENT 35 YS2-12f21.q1k chrm 337 297 81407 81447 C 41 100.00 378 reject_low 17 ALIGNMENT 0 YS2-12f21.p1k chrm 66 353 83095 83094 F 288 0.00 353 reject_low 29 ALIGNMENT 0 YS2-12f21.q1k chrm 378 338 11510 11509 C 41 0.00 378 reject_low 12,15 ALIGNMENT 40 YS2-12f21.q1k chrm 291 337 2743 2790 F 47 97.87 378 reject_low 22 ALIGNMENT 0 YS2-12f21.q1k chrm 296 62 83098 83097 C 235 0.00 378 reject_low 16 ALIGNMENT 0 YS2-12f21.q1k chrm 378 338 46319 46318 C 41 0.00 378 reject_low 25 ALIGNMENT 0 YS2-12f21.q1k chrm 338 378 9528 9527 F 41 0.00 378 reject_low 6 ALIGNMENT 44 YS2-12f21.q1k chrm 337 291 76598 76644 C 47 100.00 378 reject_low 10,11 ALIGNMENT 0 YS2-12f21.q1k chrm 338 378 2790 2789 F 41 0.00 378 reject_low 22 ALIGNMENT 0 YS2-12f21.p1k chrm 80 353 81457 81456 F 274 0.00 353 reject_low 16 ALIGNMENT 0 YS2-12f21.q1k chrm 298 62 46357 46356 C 237 0.00 378 reject_low 25 ALIGNMENT 41 YS2-12f21.q1k vc_1 378 338 2472 2512 C 41 100.00 378 reject_low 2 ALIGNMENT 0 YS2-12f21.q1k chrm 378 338 8240 8239 C 41 0.00 378 reject_low 13 ALIGNMENT 38 YS2-12f21.q1k chrm 337 293 53830 53874 C 45 97.78 378 reject_low 9,18 ALIGNMENT 0 YS2-12f21.q1k chrm 296 62 52816 52815 C 235 0.00 378 reject_low 26 ALIGNMENT 24 YS2-12f21.p1k chrm 65 31 85 119 C 35 97.14 353 reject_low 19 ALIGNMENT 0 YS2-12f21.q1k chrm 338 378 75659 75658 F 41 0.00 378 accept_chi 0 ALIGNMENT 0 YS2-12f21.p1k chrm 353 78 9479 9478 C 276 0.00 353 reject_low 6 ALIGNMENT 32 YS2-12f21.q1k chrm 337 297 52775 52815 C 41 97.56 378 reject_low 26 ALIGNMENT 0 YS2-12f21.q1k chrm 62 275 52312 52311 F 214 0.00 378 reject_low 7 ALIGNMENT 31 YS2-12f21.p1k chrm 30 73 11052 11096 F 44 93.18 353 reject_low 15 ALIGNMENT 0 YS2-12f21.p1k chrm 77 353 69495 69494 F 277 0.00 353 reject_low 10 ALIGNMENT 0 YS2-12f21.p1k chrm 80 353 9088 9087 F 274 0.00 353 reject_low 12 ALIGNMENT 0 YS2-12f21.q1k chrm 378 338 80507 80506 C 41 0.00 378 reject_low 14 ALIGNMENT 33 YS2-12f21.q1k chrm 337 299 46318 46356 C 39 100.00 378 reject_low 25 ALIGNMENT 39 YS2-12f21.q1k chrm 337 294 34290 34333 C 44 100.00 378 reject_low 23 ALIGNMENT 24 YS2-12f21.p1k chrm 30 65 3065 3101 F 36 97.22 353 reject_low 13 ALIGNMENT 36 YS2-12f21.p1k chrm 77 31 9478 9524 C 47 93.62 353 reject_low 6 ALIGNMENT 33 YS2-12f21.p1k chrm 79 31 52319 52366 C 49 91.84 353 reject_low 7 ALIGNMENT 35 YS2-12f21.q1k chrm 297 337 83 123 F 41 100.00 378 reject_low 19 ALIGNMENT 44 YS2-12f21.q1k chrm 337 291 80506 80552 C 47 100.00 378 reject_low 14 ALIGNMENT 21 YS2-12f21.p1k chrm 30 65 52777 52813 F 36 94.44 353 reject_low 21 ALIGNMENT 24 YS2-12f21.p1k chrm 30 65 83059 83095 F 36 97.22 353 reject_low 29 ALIGNMENT 0 YS2-12f21.q1k chrm 378 338 62866 62865 C 41 0.00 378 reject_low 20,21 ALIGNMENT 0 YS2-12f21.p1k chrm 74 353 66876 66875 F 280 0.00 353 reject_low 11 ALIGNMENT 0 YS2-12f21.q1k chrm 62 296 83 82 F 235 0.00 378 reject_low 19 ALIGNMENT 0 YS2-12f21.p1k chrm 353 66 86 85 C 288 0.00 353 reject_low 19 ALIGNMENT 0 YS2-12f21.p1k chrm 127 353 11613 11612 F 227 0.00 353 reject_low 8 ALIGNMENT 0 YS2-12f21.p1k chrm 66 353 46356 46355 F 288 0.00 353 reject_low 18 ALIGNMENT 0 YS2-12f21.q1k chrm 378 338 83058 83057 C 41 0.00 378 reject_low 16 ALIGNMENT 0 YS2-12f21.q1k chrm 338 378 52370 52369 F 41 0.00 378 reject_low 7 ALIGNMENT 0 YS2-12f21.q1k chrm 292 62 53875 53874 C 231 0.00 378 reject_low 9,18 ALIGNMENT 41 YS2-12f21.q1k vc_4 338 378 5831 5871 F 41 100.00 378 reject_low 4 ALIGNMENT 0 YS2-12f21.p1k chrm 66 353 53868 53867 F 288 0.00 353 reject_low 20 ALIGNMENT 34 YS2-12f21.p1k chrm 30 73 80508 80552 F 44 95.45 353 reject_low 17 ALIGNMENT 41 YS2-12f21.q1k vc_3 378 338 2472 2512 C 41 100.00 378 reject_low 3 ALIGNMENT 0 YS2-12f21.p1k chrm 61 353 73047 73046 F 293 0.00 353 reject_low 14 ALIGNMENT 34 YS2-12f21.p1k chrm 30 79 9037 9088 F 50 92.00 353 reject_low 12 ALIGNMENT 0 YS2-12f21.p1k chrm 353 335 75354 75353 C 19 0.00 353 accept_chi 1 ALIGNMENT 0 YS2-12f21.q1k chrm 298 62 2137 2136 C 237 0.00 378 reject_low 24 ALIGNMENT 31 YS2-12f21.p1k chrm 71 31 71208 71248 C 41 95.12 353 reject_low 28 ALIGNMENT 33 YS2-12f21.q1k chrm 337 299 62865 62903 C 39 100.00 378 reject_low 20,21 ALIGNMENT 41 YS2-12f21.q1k chrm 276 337 52312 52370 F 62 91.94 378 reject_low 7 ALIGNMENT 0 YS2-12f21.q1k vc_1 337 62 2513 2512 C 276 0.00 378 reject_low 2 ALIGNMENT 30 YS2-12f21.p1k chrm 86 35 31020 31070 C 52 88.46 353 reject_low 27 ALIGNMENT 24 YS2-12f21.p1k chrm 30 65 46320 46356 F 36 97.22 353 reject_low 18 ALIGNMENT 258 YS2-12f21.p1k chrm 334 31 75353 75655 C 304 99.01 353 accept_chi 1 ALIGNMENT 956 YS2-12f22.p1k chr16 38 1156 580383 581516 F 1119 94.64 1253 accept 0 ALIGNMENT 1056 YS2-12f22.q1k chr16 1311 44 583523 584802 C 1268 95.19 1373 accept 0 ALIGNMENT 36 YS2-12f23.q1k vc_5 320 285 1 36 C 36 100.00 323 reject_low 8 ALIGNMENT 41 YS2-12f23.q1k vc_3 323 283 2472 2512 C 41 100.00 323 reject_low 4 ALIGNMENT 220 YS2-12f23.p1k chr13 31 273 176777 177020 F 243 98.77 292 accept_chi 1 ALIGNMENT 41 YS2-12f23.q1k vc_4 283 323 5831 5871 F 41 100.00 323 reject_low 5 ALIGNMENT 39 YS2-12f23.q1k vc_5 323 285 5025 5063 C 39 100.00 323 reject_low 6 ALIGNMENT 227 YS2-12f23.q1k chr13 282 40 176777 177020 C 243 99.59 323 accept_chi 0 ALIGNMENT 0 YS2-12f23.p1k chr13 274 292 177020 177019 F 19 0.00 292 accept_chi 1 ALIGNMENT 38 YS2-12f23.q1k vc_7 286 323 13525 13562 F 38 100.00 323 reject_low 7 ALIGNMENT 0 YS2-12f23.q1k vc_2 282 62 2146 2145 C 221 0.00 323 reject_low 3 ALIGNMENT 41 YS2-12f23.q1k vc_1 323 283 2472 2512 C 41 100.00 323 reject_low 2 ALIGNMENT 0 YS2-12f23.q1k chr13 323 283 176778 176777 C 41 0.00 323 accept_chi 0 ALIGNMENT 0 YS2-12f23.q1k vc_5 284 62 37 36 C 223 0.00 323 reject_low 8 ALIGNMENT 0 YS2-12f23.q1k vc_4 62 282 5831 5830 F 221 0.00 323 reject_low 5 ALIGNMENT 0 YS2-12f23.q1k vc_1 282 62 2513 2512 C 221 0.00 323 reject_low 2 ALIGNMENT 0 YS2-12f23.q1k vc_5 284 62 5064 5063 C 223 0.00 323 reject_low 6 ALIGNMENT 0 YS2-12f23.q1k vc_7 62 285 13525 13524 F 224 0.00 323 reject_low 7 ALIGNMENT 0 YS2-12f23.q1k vc_3 282 62 2513 2512 C 221 0.00 323 reject_low 4 ALIGNMENT 41 YS2-12f23.q1k vc_2 323 283 2105 2145 C 41 100.00 323 reject_low 3 ALIGNMENT 1026 YS2-12g01.q1k chr09 1203 40 250347 251511 C 1164 96.48 1342 accept 0 ALIGNMENT 973 YS2-12g01.p1k chr09 58 1182 249673 250806 F 1125 96.36 1299 accept 0 ALIGNMENT 941 YS2-12g03.q1k chr09 1197 39 134402 135560 C 1159 94.39 1385 accept 0 ALIGNMENT 0 YS2-12g03.q1k chr09 882 746 132657 132656 C 137 0.00 1385 reject_low 1 ALIGNMENT 71 YS2-12g03.q1k chr09 745 475 132656 132926 C 271 76.38 1385 reject_low 1 ALIGNMENT 0 YS2-12g03.q1k chr09 474 62 132927 132926 C 413 0.00 1385 reject_low 1 ALIGNMENT 867 YS2-12g04.q1k chr09 995 37 377619 378591 C 959 97.39 1291 accept 0 ALIGNMENT 136 YS2-12g04.p1k chr09 145 435 373641 373906 F 291 87.97 1486 accept 0 ALIGNMENT 1035 YS2-12g05.p1k chr09 1198 59 218352 219496 C 1140 97.37 1299 accept 0 ALIGNMENT 1016 YS2-12g05.q1k chr09 30 1190 216507 217672 F 1161 97.16 1372 accept 0 ALIGNMENT 730 YS2-12g06.q1k scplasm1 40 1083 1563 2609 F 1044 90.80 1385 accept 0 ALIGNMENT 1031 YS2-12g07.p1k chr09 60 1219 354067 355231 F 1160 97.07 1327 accept 0 ALIGNMENT 0 YS2-12g07.q1k chr09 631 632 358237 358266 C 0 0.00 1334 accept 0 ALIGNMENT 570 YS2-12g07.q1k chr09 634 38 358264 358860 C 597 100.00 1334|3,0 accept 0 ALIGNMENT 379 YS2-12g07.q1k chr09 1110 628 357744 358240 C 483 93.17 1334|0,4 accept 0 ALIGNMENT 959 YS2-12g08.p1k chr13 29 1150 402751 403879 F 1122 96.43 1331 accept 0 ALIGNMENT 930 YS2-12g08.q1k chr13 1053 29 406808 407849 C 1025 97.76 1365 accept 0 ALIGNMENT 1031 YS2-12g09.p1k chr05 1294 27 32298 33580 C 1268 94.72 1322 accept 0 ALIGNMENT 1002 YS2-12g09.q1k chr05 38 1169 28837 29985 F 1132 97.61 1352 accept 0 ALIGNMENT 217 YS2-12g10.q1k chr11 267 38 317029 317258 C 230 99.13 308 accept_chi 1 ALIGNMENT 38 YS2-12g10.q1k vc_7 271 308 13525 13562 F 38 100.00 308 reject_low 6 ALIGNMENT 0 YS2-12g10.q1k vc_7 62 270 13525 13524 F 209 0.00 308 reject_low 6 ALIGNMENT 0 YS2-12g10.q1k vc_1 265 62 2515 2514 C 204 0.00 308 reject_low 2 ALIGNMENT 36 YS2-12g10.q1k vc_5 305 270 1 36 C 36 100.00 308 reject_low 7 ALIGNMENT 0 YS2-12g10.q1k vc_4 62 265 5829 5828 F 204 0.00 308 reject_low 4 ALIGNMENT 42 YS2-12g10.q1k vc_3 308 266 2472 2514 C 43 100.00 308 reject_low 3 ALIGNMENT 217 YS2-12g10.p1k chr11 31 260 317029 317258 F 230 99.13 279 accept_chi 0 ALIGNMENT 0 YS2-12g10.p1k chr11 261 279 317258 317257 F 19 0.00 279 accept_chi 0 ALIGNMENT 39 YS2-12g10.q1k vc_5 308 270 5025 5063 C 39 100.00 308 reject_low 5 ALIGNMENT 0 YS2-12g10.q1k vc_5 269 62 5064 5063 C 208 0.00 308 reject_low 5 ALIGNMENT 0 YS2-12g10.q1k chr11 308 268 317030 317029 C 41 0.00 308 accept_chi 1 ALIGNMENT 42 YS2-12g10.q1k vc_4 266 308 5829 5871 F 43 100.00 308 reject_low 4 ALIGNMENT 42 YS2-12g10.q1k vc_1 308 266 2472 2514 C 43 100.00 308 reject_low 2 ALIGNMENT 0 YS2-12g10.q1k vc_3 265 62 2515 2514 C 204 0.00 308 reject_low 3 ALIGNMENT 0 YS2-12g10.q1k vc_5 269 62 37 36 C 208 0.00 308 reject_low 7 ALIGNMENT 1025 YS2-12g11.q1k chr12 40 1220 464863 466050 F 1181 96.19 1391 reject_low 1 ALIGNMENT 205 YS2-12g11.p1k chr12 350 59 451419 451723 C 292 92.47 1355 reject_low 2 ALIGNMENT 1025 YS2-12g11.q1k chr12 40 1220 455726 456913 F 1181 96.19 1391 accept 0 ALIGNMENT 0 YS2-12g11.p1k chr12 800 351 451420 451419 C 450 0.00 1355 reject_low 2 ALIGNMENT 749 YS2-12g11.p1k chr12 1172 59 459694 460860 C 1114 90.84 1355 accept 0 ALIGNMENT 944 YS2-12g12.p1k chr14 1040 35 669287 670296 C 1006 98.71 1300 accept 0 ALIGNMENT 1061 YS2-12g12.q1k chr14 30 1203 665750 666932 F 1174 97.36 1426 accept 0 ALIGNMENT 1029 YS2-12g13.p1k chr10 27 1163 578651 579790 F 1137 97.27 1279 accept 0 ALIGNMENT 927 YS2-12g13.q1k chr10 1147 38 582084 583210 C 1110 96.13 1310 accept 0 ALIGNMENT 0 YS2-12g14.q1k vc_1 969 62 2512 2511 C 908 0.00 1365 reject_low 18 ALIGNMENT 0 YS2-12g14.q1k vc_4 1010 1009 5872 6353 F 0 0.00 1365 reject_low 13 ALIGNMENT 103 YS2-12g14.q1k vc_2 1009 1167 2164 2332 F 159 90.57 1365 reject_low 9 ALIGNMENT 40 YS2-12g14.q1k vc_2 1009 970 2105 2144 C 40 100.00 1365 reject_low 19 ALIGNMENT 103 YS2-12g14.q1k vc_5 1009 1167 2398 2566 F 159 90.57 1365 reject_low 1 ALIGNMENT 99 YS2-12g14.q1k vc_4 1009 1154 6353 6506 F 146 91.10 1365|1,0 reject_low 13 ALIGNMENT 103 YS2-12g14.q1k vc_3 1009 1167 2531 2699 F 159 90.57 1365 reject_low 10 ALIGNMENT 0 YS2-12g14.q1k vc_3 969 62 2512 2511 C 908 0.00 1365 reject_low 20 ALIGNMENT 25 YS2-12g14.p1k vc_1 1006 977 2442 2472 C 30 96.67 1331 reject_low 16 ALIGNMENT 0 YS2-12g14.q1k vc_5 970 62 5064 5063 C 909 0.00 1365 reject_low 21 ALIGNMENT 0 YS2-12g14.p1k vc_5 976 62 5026 5025 C 915 0.00 1331 reject_low 1 ALIGNMENT 103 YS2-12g14.q1k vc_7 1167 1009 2559 2727 C 159 89.94 1365 reject_low 2 ALIGNMENT 103 YS2-12g14.q1k vc_1 1009 1167 2531 2699 F 159 90.57 1365 reject_low 8 ALIGNMENT 0 YS2-12g14.q1k vc_2 969 62 2145 2144 C 908 0.00 1365 reject_low 19 ALIGNMENT 0 YS2-12g14.p1k vc_3 976 62 2106 2105 C 915 0.00 1331 reject_low 5 ALIGNMENT 0 YS2-12g14.p1k vc_4 62 976 5871 5870 F 915 0.00 1331 reject_low 6 ALIGNMENT 0 YS2-12g14.p1k chr01 197 62 198665 198664 C 136 0.00 1331 accept 0 ALIGNMENT 0 YS2-12g14.p1k vc_3 976 62 2473 2472 C 915 0.00 1331 reject_low 17 ALIGNMENT 0 YS2-12g14.q1k vc_1 62 1008 2531 2530 F 947 0.00 1365 reject_low 8 ALIGNMENT 0 YS2-12g14.q1k vc_4 62 1008 126 125 F 947 0.00 1365 reject_low 12 ALIGNMENT 154 YS2-12g14.p1k vc_7 977 1241 100 374 F 265 86.42 1331 reject_low 2 ALIGNMENT 40 YS2-12g14.q1k vc_1 1009 970 2472 2511 C 40 100.00 1365 reject_low 18 ALIGNMENT 0 YS2-12g14.q1k vc_7 62 971 63 62 F 910 0.00 1365 reject_low 22 ALIGNMENT 0 YS2-12g14.q1k vc_4 1008 62 1535 1534 C 947 0.00 1365 reject_low 14 ALIGNMENT 154 YS2-12g14.p1k vc_2 1241 977 1831 2105 C 265 86.42 1331 reject_low 4 ALIGNMENT 0 YS2-12g14.q1k vc_4 1008 62 5813 5812 C 947 0.00 1365 reject_low 11 ALIGNMENT 0 YS2-12g14.p1k vc_7 62 976 100 99 F 915 0.00 1331 reject_low 2 ALIGNMENT 0 YS2-12g14.p1k chr01 314 62 217315 217314 C 253 0.00 1331 reject_low 15 ALIGNMENT 0 YS2-12g14.p1k vc_1 976 62 2106 2105 C 915 0.00 1331 reject_low 3 ALIGNMENT 0 YS2-12g14.q1k vc_4 62 969 5832 5831 F 908 0.00 1365 reject_low 13 ALIGNMENT 0 YS2-12g14.q1k vc_7 62 971 13525 13524 F 910 0.00 1365 reject_low 23 ALIGNMENT 0 YS2-12g14.p1k chr01 913 371 217262 217261 C 543 0.00 1331 reject_low 15 ALIGNMENT 99 YS2-12g14.q1k vc_4 1009 1154 126 279 F 146 91.10 1365 reject_low 12 ALIGNMENT 154 YS2-12g14.p1k vc_4 977 1241 5871 6145 F 265 86.42 1331 reject_low 6 ALIGNMENT 39 YS2-12g14.q1k vc_5 1009 971 5025 5063 C 39 100.00 1365 reject_low 21 ALIGNMENT 0 YS2-12g14.q1k chr01 799 888 198664 198663 F 90 0.00 1365 accept 0 ALIGNMENT 38 YS2-12g14.q1k vc_7 972 1009 13525 13562 F 38 100.00 1365 reject_low 23 ALIGNMENT 154 YS2-12g14.p1k vc_1 1241 977 1831 2105 C 265 86.42 1331 reject_low 3 ALIGNMENT 71 YS2-12g14.q1k vc_4 1093 1009 1450 1534 C 85 94.12 1365 reject_low 14 ALIGNMENT 40 YS2-12g14.q1k vc_3 1009 970 2472 2511 C 40 100.00 1365 reject_low 20 ALIGNMENT 154 YS2-12g14.p1k vc_7 977 1241 13562 13836 F 265 86.42 1331 reject_low 7 ALIGNMENT 154 YS2-12g14.p1k vc_5 1241 977 4751 5025 C 265 86.42 1331 reject_low 1 ALIGNMENT 0 YS2-12g14.p1k vc_7 62 976 13562 13561 F 915 0.00 1331 reject_low 7 ALIGNMENT 30 YS2-12g14.p1k chr01 370 315 217261 217314 C 56 87.50 1331 reject_low 15 ALIGNMENT 582 YS2-12g14.q1k chr01 38 798 197905 198664 F 761 93.17 1365 accept 0 ALIGNMENT 0 YS2-12g14.q1k vc_2 62 1008 2164 2163 F 947 0.00 1365 reject_low 9 ALIGNMENT 25 YS2-12g14.p1k vc_3 1006 977 2442 2472 C 30 96.67 1331 reject_low 17 ALIGNMENT 0 YS2-12g14.q1k vc_5 62 1008 2398 2397 F 947 0.00 1365 reject_low 1 ALIGNMENT 0 YS2-12g14.p1k vc_2 976 62 2106 2105 C 915 0.00 1331 reject_low 4 ALIGNMENT 103 YS2-12g14.q1k vc_4 1167 1009 5644 5812 C 159 89.94 1365 reject_low 11 ALIGNMENT 0 YS2-12g14.q1k vc_5 970 62 37 36 C 909 0.00 1365 reject_low 24 ALIGNMENT 0 YS2-12g14.p1k vc_1 976 62 2473 2472 C 915 0.00 1331 reject_low 16 ALIGNMENT 36 YS2-12g14.q1k vc_5 1006 971 1 36 C 36 100.00 1365 reject_low 24 ALIGNMENT 40 YS2-12g14.q1k vc_4 970 1009 5832 5871 F 40 100.00 1365 reject_low 13 ALIGNMENT 0 YS2-12g14.q1k vc_7 1008 62 2728 2727 C 947 0.00 1365 reject_low 2 ALIGNMENT 0 YS2-12g14.q1k vc_3 62 1008 2531 2530 F 947 0.00 1365 reject_low 10 ALIGNMENT 574 YS2-12g14.p1k chr01 947 198 197916 198664 C 750 93.07 1331 accept 0 ALIGNMENT 154 YS2-12g14.p1k vc_3 1241 977 1831 2105 C 265 86.42 1331 reject_low 5 ALIGNMENT 38 YS2-12g14.q1k vc_7 972 1009 63 100 F 38 100.00 1365 reject_low 22 ALIGNMENT 1005 YS2-12g15.p1k chr04 61 1194 1050983 1052120 F 1134 96.74 1349 accept 0 ALIGNMENT 1011 YS2-12g15.q1k chr04 1267 37 1051816 1053054 C 1231 94.80 1405 accept 0 ALIGNMENT 997 YS2-12g16.p1k chr03 28 1204 128403 129594 F 1177 96.09 1351 accept 0 ALIGNMENT 946 YS2-12g16.q1k chr03 1123 38 129632 130732 C 1086 97.24 1410 accept 0 ALIGNMENT 996 YS2-12g17.p1k chr16 1271 61 519338 520556 C 1211 94.55 1284 accept 0 ALIGNMENT 992 YS2-12g17.q1k chr16 29 1248 515028 516256 F 1220 95.25 1344 accept 0 ALIGNMENT 1044 YS2-12g18.p1k chr14 30 1187 91631 92799 F 1158 97.75 1315 accept 0 ALIGNMENT 912 YS2-12g18.q1k chr14 1089 37 94791 95853 C 1053 97.34 1346 accept 0 ALIGNMENT 1029 YS2-12g19.q1k chr05 1165 39 426353 427487 C 1127 97.69 1360 accept 0 ALIGNMENT 956 YS2-12g19.p1k chr05 31 1130 426338 427453 F 1100 96.45 1240 accept 0 ALIGNMENT 1025 YS2-12g20.p1k chr16 1249 31 443745 444967 C 1219 95.90 1338 accept_trans 0 ALIGNMENT 955 YS2-12g20.q1k chr16 38 1109 433513 434599 F 1072 97.48 1368 accept_trans 0 ALIGNMENT 40 YS2-12g21.q1k vc_5 601 559 5025 5067 C 43 97.67 601 reject_low 5 ALIGNMENT 506 YS2-12g21.q1k chr04 32 560 1235675 1236203 F 529 99.43 601 accept_chi 0 ALIGNMENT 38 YS2-12g21.q1k vc_7 564 601 13525 13562 F 38 100.00 601 reject_low 6 ALIGNMENT 0 YS2-12g21.p1k chr04 579 562 1235672 1235671 C 18 0.00 579 accept_chi 1 ALIGNMENT 0 YS2-12g21.q1k vc_4 62 560 5831 5830 F 499 0.00 601 reject_low 4 ALIGNMENT 0 YS2-12g21.q1k chr04 561 601 1236203 1236202 F 41 0.00 601 accept_chi 0 ALIGNMENT 41 YS2-12g21.q1k vc_4 561 601 5831 5871 F 41 100.00 601 reject_low 4 ALIGNMENT 0 YS2-12g21.q1k vc_5 558 62 5068 5067 C 497 0.00 601 reject_low 5 ALIGNMENT 37 YS2-12g21.q1k vc_5 598 559 1 40 C 40 97.50 601 reject_low 7 ALIGNMENT 0 YS2-12g21.q1k vc_5 558 62 41 40 C 497 0.00 601 reject_low 7 ALIGNMENT 0 YS2-12g21.q1k vc_7 62 563 13525 13524 F 502 0.00 601 reject_low 6 ALIGNMENT 41 YS2-12g21.q1k vc_1 601 561 2472 2512 C 41 100.00 601 reject_low 2 ALIGNMENT 41 YS2-12g21.q1k vc_3 601 561 2472 2512 C 41 100.00 601 reject_low 3 ALIGNMENT 0 YS2-12g21.q1k vc_1 560 62 2513 2512 C 499 0.00 601 reject_low 2 ALIGNMENT 0 YS2-12g21.q1k vc_3 560 62 2513 2512 C 499 0.00 601 reject_low 3 ALIGNMENT 500 YS2-12g21.p1k chr04 561 30 1235671 1236202 C 532 98.87 579 accept_chi 1 ALIGNMENT 901 YS2-12g22.q1k chr14 42 1023 107172 108158 F 982 97.76 1385 accept 0 ALIGNMENT 999 YS2-12g22.p1k chr14 1213 33 110194 111389 C 1181 95.77 1272 accept 0 ALIGNMENT 910 YS2-12g23.q1k chr15 33 1022 320236 321230 F 990 98.18 1275 accept 0 ALIGNMENT 936 YS2-12g23.p1k chr15 1072 29 320262 321306 C 1044 97.61 1243 accept 0 ALIGNMENT 361 YS2-12g24.q1k chr02 26 641 228746 229354 F 616 87.99 1467 accept 0 ALIGNMENT 1042 YS2-12g24.p1k chr02 1254 31 232972 234212 C 1224 96.16 1261 accept 0 ALIGNMENT 0 YS2-12h01.q1k vc_4 62 494 5830 5829 F 433 0.00 536 reject_low 4 ALIGNMENT 0 YS2-12h01.p1k chr13 504 487 29555 29554 C 18 0.00 504 ambiguous_tel 1 ALIGNMENT 0 YS2-12h01.q1k vc_7 62 498 13525 13524 F 437 0.00 536 reject_low 6 ALIGNMENT 36 YS2-12h01.q1k vc_5 533 498 1 36 C 36 100.00 536 reject_low 7 ALIGNMENT 42 YS2-12h01.q1k vc_1 536 495 2472 2513 C 42 100.00 536 reject_low 2 ALIGNMENT 0 YS2-12h01.q1k vc_5 497 62 5064 5063 C 436 0.00 536 reject_low 5 ALIGNMENT 0 YS2-12h01.q1k vc_3 494 62 2514 2513 C 433 0.00 536 reject_low 3 ALIGNMENT 38 YS2-12h01.q1k vc_7 499 536 13525 13562 F 38 100.00 536 reject_low 6 ALIGNMENT 0 YS2-12h01.q1k vc_5 497 62 37 36 C 436 0.00 536 reject_low 7 ALIGNMENT 42 YS2-12h01.q1k vc_3 536 495 2472 2513 C 42 100.00 536 reject_low 3 ALIGNMENT 443 YS2-12h01.q1k chr13 38 496 29554 30012 F 459 98.91 536 ambiguous_tel 0 ALIGNMENT 42 YS2-12h01.q1k vc_4 495 536 5830 5871 F 42 100.00 536 reject_low 4 ALIGNMENT 0 YS2-12h01.q1k vc_1 494 62 2514 2513 C 433 0.00 536 reject_low 2 ALIGNMENT 434 YS2-12h01.p1k chr13 486 29 29554 30012 C 458 98.47 504 ambiguous_tel 1 ALIGNMENT 0 YS2-12h01.q1k chr13 497 536 30012 30011 F 40 0.00 536 ambiguous_tel 0 ALIGNMENT 39 YS2-12h01.q1k vc_5 536 498 5025 5063 C 39 100.00 536 reject_low 5 ALIGNMENT 970 YS2-12h03.q1k chr02 34 1210 772947 774125 F 1177 95.16 1414 accept 0 ALIGNMENT 713 YS2-12h03.p1k chr02 1018 29 778262 779264 C 990 93.03 1265 accept 0 ALIGNMENT 1009 YS2-12h04.p1k chr04 24 1153 415030 416162 F 1130 96.99 1329 accept 0 ALIGNMENT 1019 YS2-12h04.q1k chr04 1191 29 416398 417570 C 1163 96.47 1373 accept 0 ALIGNMENT 283 YS2-12h05.p1k chr14 205 942 233761 234495 F 738 80.62 1392 accept 0 ALIGNMENT 553 YS2-12h05.q1k chr14 894 45 235627 236474 C 850 89.88 1502 accept 0 ALIGNMENT 1067 YS2-12h06.p1k chr16 1253 42 921620 922836 C 1212 96.04 1378 accept 0 ALIGNMENT 225 YS2-12h06.p1k chr12 176 977 35527 36317 F 802 76.68 1378 reject_low 1 ALIGNMENT 0 YS2-12h06.p1k chr12 62 175 35527 35526 F 114 0.00 1378 reject_low 1 ALIGNMENT 929 YS2-12h06.q1k chr16 40 1057 919699 920729 F 1018 97.74 1350 accept 0 ALIGNMENT 36 YS2-12h07.q1k vc_5 269 234 1 36 C 36 100.00 272 reject_low 7 ALIGNMENT 41 YS2-12h07.q1k vc_3 272 232 2472 2512 C 41 100.00 272 reject_low 3 ALIGNMENT 39 YS2-12h07.q1k vc_5 272 234 5025 5063 C 39 100.00 272 reject_low 5 ALIGNMENT 0 YS2-12h07.q1k vc_1 231 62 2513 2512 C 170 0.00 272 reject_low 2 ALIGNMENT 0 YS2-12h07.q1k vc_5 233 62 5064 5063 C 172 0.00 272 reject_low 5 ALIGNMENT 185 YS2-12h07.p1k chr13 239 37 588274 588475 C 203 98.52 240 accept_chi 1 ALIGNMENT 0 YS2-12h07.q1k vc_5 233 62 37 36 C 172 0.00 272 reject_low 7 ALIGNMENT 38 YS2-12h07.q1k vc_7 235 272 13525 13562 F 38 100.00 272 reject_low 6 ALIGNMENT 41 YS2-12h07.q1k vc_1 272 232 2472 2512 C 41 100.00 272 reject_low 2 ALIGNMENT 192 YS2-12h07.q1k chr13 30 231 588274 588475 F 202 99.50 272 accept_chi 0 ALIGNMENT 41 YS2-12h07.q1k vc_4 232 272 5831 5871 F 41 100.00 272 reject_low 4 ALIGNMENT 0 YS2-12h07.q1k vc_7 62 234 13525 13524 F 173 0.00 272 reject_low 6 ALIGNMENT 0 YS2-12h07.q1k vc_3 231 62 2513 2512 C 170 0.00 272 reject_low 3 ALIGNMENT 0 YS2-12h07.q1k vc_4 62 231 5831 5830 F 170 0.00 272 reject_low 4 ALIGNMENT 0 YS2-12h07.q1k chr13 232 272 588475 588474 F 41 0.00 272 accept_chi 0 ALIGNMENT 957 YS2-12h08.p1k chr14 26 1157 697090 698238 F 1132 96.20 1302 accept 0 ALIGNMENT 1020 YS2-12h08.q1k chr14 1214 37 698547 699737 C 1178 96.35 1438 accept 0 ALIGNMENT 1041 YS2-12h09.p1k chr12 31 1293 455600 456867 F 1263 95.25 1405 accept 0 ALIGNMENT 103 YS2-12h09.q1k chr12 954 841 482047 482162 C 114 97.37 1398 reject_low 5 ALIGNMENT 1032 YS2-12h09.p1k chr12 31 1231 464737 465933 F 1201 96.09 1405 reject_low 1 ALIGNMENT 0 YS2-12h09.q1k chr12 840 62 472583 472582 C 779 0.00 1398 reject_low 4 ALIGNMENT 112 YS2-12h09.q1k chr12 954 826 489351 489481 C 129 96.12 1398 reject_low 3 ALIGNMENT 79 YS2-12h09.q1k chr12 114 36 451419 451497 C 79 100.00 1398 reject_low 2 ALIGNMENT 0 YS2-12h09.q1k chr12 825 62 489482 489481 C 764 0.00 1398 reject_low 3 ALIGNMENT 0 YS2-12h09.q1k chr12 840 62 468931 468930 C 779 0.00 1398 reject_low 1 ALIGNMENT 0 YS2-12h09.q1k chr12 822 115 451420 451419 C 708 0.00 1398 reject_low 2 ALIGNMENT 0 YS2-12h09.q1k chr12 840 62 482163 482162 C 779 0.00 1398 reject_low 5 ALIGNMENT 103 YS2-12h09.q1k chr12 954 841 485699 485814 C 114 97.37 1398 reject_low 6 ALIGNMENT 130 YS2-12h09.q1k chr12 1049 841 468710 468930 C 209 89.47 1398 reject_low 1 ALIGNMENT 747 YS2-12h09.q1k chr12 1049 36 459573 460634 C 1014 93.10 1398 accept 0 ALIGNMENT 103 YS2-12h09.q1k chr12 954 841 472467 472582 C 114 97.37 1398 reject_low 4 ALIGNMENT 0 YS2-12h09.q1k chr12 840 62 485815 485814 C 779 0.00 1398 reject_low 6 ALIGNMENT 816 YS2-12h11.q1k chr12 1167 46 467218 468311 C 1122 93.94 1389 accept 1 ALIGNMENT 969 YS2-12h11.p1k chr12 31 1128 456369 457485 F 1098 96.54 1337 accept 0 ALIGNMENT 969 YS2-12h11.p1k chr12 31 1128 465506 466622 F 1098 96.54 1337 accept 1 ALIGNMENT 816 YS2-12h11.q1k chr12 1167 46 458081 459174 C 1122 93.94 1389 accept 0 ALIGNMENT 918 YS2-12h12.q1k chr04 1104 34 782457 783545 C 1071 96.17 1359 accept 0 ALIGNMENT 867 YS2-12h12.p1k chr04 31 1104 778516 779626 F 1074 95.16 1319 accept 0 ALIGNMENT 0 YS2-12h12.p1k chr06 261 62 186261 186260 C 200 0.00 1319 reject_low 2 ALIGNMENT 25 YS2-12h12.p1k chr09 320 257 105763 105826 C 64 95.31 1319 reject_low 1 ALIGNMENT 0 YS2-12h12.p1k chr06 861 317 186207 186206 C 545 0.00 1319 reject_low 2 ALIGNMENT 24 YS2-12h12.p1k chr06 316 262 186206 186260 C 55 96.36 1319 reject_low 2 ALIGNMENT 0 YS2-12h12.p1k chr09 861 321 105764 105763 C 541 0.00 1319 reject_low 1 ALIGNMENT 0 YS2-12h12.p1k chr09 256 62 105827 105826 C 195 0.00 1319 reject_low 1 ALIGNMENT 301 YS2-12h13.p1k chr03 48 417 808 1178 F 370 96.22 1339 ambiguous_tel 27 ALIGNMENT 0 YS2-12h13.p1k chr07 944 390 1083591 1083590 C 555 0.00 1339 ambiguous_tel 31 ALIGNMENT 691 YS2-12h13.p1k chr01 38 1088 501 1557 F 1051 90.20 1339 ambiguous_tel 13 ALIGNMENT 686 YS2-12h13.p1k chr10 39 1057 7469 8492 F 1019 90.78 1339 ambiguous_tel 21 ALIGNMENT 0 YS2-12h13.p1k chr16 535 944 7420 7419 F 410 0.00 1339 ambiguous_tel 26 ALIGNMENT 0 YS2-12h13.p1k chr08 944 303 556142 556141 C 642 0.00 1339 ambiguous_tel 33 ALIGNMENT 158 YS2-12h13.p1k chr11 719 476 665307 665548 C 244 89.75 1339 ambiguous_tel 38 ALIGNMENT 248 YS2-12h13.p1k chr08 38 388 5204 5554 F 351 92.88 1339 ambiguous_tel 30 ALIGNMENT 875 YS2-12h13.q1k chr14 30 1101 566070 567153 F 1072 95.43 1311 ambiguous_trans 12 ALIGNMENT 216 YS2-12h13.p1k chr11 337 39 665543 665841 C 299 93.65 1339 ambiguous_tel 38 ALIGNMENT 0 YS2-12h13.q1k chr07 321 847 566119 566118 F 527 0.00 1311 reject_low 37 ALIGNMENT 0 YS2-12h13.p1k chr15 62 838 11052 11051 F 777 0.00 1339 ambiguous_tel 28 ALIGNMENT 62 YS2-12h13.q1k chr04 28 320 990698 990991 F 293 75.09 1311 reject_low 35 ALIGNMENT 692 YS2-12h13.p1k chr12 1049 38 1063562 1064578 C 1012 91.11 1339 ambiguous_tel 19 ALIGNMENT 0 YS2-12h13.q1k chr10 847 321 479611 479610 C 527 0.00 1311 reject_low 36 ALIGNMENT 884 YS2-12h13.q1k chr02 1101 30 30480 31563 C 1072 95.71 1311 ambiguous_trans 4 ALIGNMENT 689 YS2-12h13.p1k chr09 39 1057 7486 8509 F 1019 90.87 1339 ambiguous_tel 20 ALIGNMENT 893 YS2-12h13.q1k chr04 1101 30 872655 873738 C 1072 95.99 1311 ambiguous_trans 1 ALIGNMENT 240 YS2-12h13.p1k chr07 389 39 1083590 1083939 C 351 92.31 1339 ambiguous_tel 31 ALIGNMENT 0 YS2-12h13.p1k chr05 944 485 569449 569448 C 460 0.00 1339 ambiguous_tel 22 ALIGNMENT 0 YS2-12h13.p1k chr08 389 944 5554 5553 F 556 0.00 1339 ambiguous_tel 30 ALIGNMENT 0 YS2-12h13.p1k chr03 418 944 1178 1177 F 527 0.00 1339 ambiguous_tel 27 ALIGNMENT 881 YS2-12h13.q1k chr04 30 1101 517721 518804 F 1072 95.62 1311 ambiguous_trans 6 ALIGNMENT 884 YS2-12h13.q1k chr04 1101 30 982004 983087 C 1072 95.71 1311 ambiguous_trans 5 ALIGNMENT 62 YS2-12h13.q1k chr01 28 320 164222 164515 F 293 75.09 1311 reject_low 34 ALIGNMENT 0 YS2-12h13.p1k chr11 944 720 665308 665307 C 225 0.00 1339 ambiguous_tel 38 ALIGNMENT 878 YS2-12h13.q1k chr06 1101 30 138747 139830 C 1072 95.52 1311 ambiguous_trans 10 ALIGNMENT 0 YS2-12h13.p1k chr15 531 944 1039 1038 F 414 0.00 1339 ambiguous_tel 23 ALIGNMENT 194 YS2-12h13.p1k chr08 302 38 556141 556405 C 265 93.58 1339 ambiguous_tel 33 ALIGNMENT 275 YS2-12h13.p1k chr15 534 38 1083721 1084218 C 497 87.32 1339 ambiguous_tel 25 ALIGNMENT 275 YS2-12h13.p1k chr16 38 534 6923 7420 F 497 87.32 1339 ambiguous_tel 26 ALIGNMENT 881 YS2-12h13.q1k chr12 1101 30 942028 943111 C 1072 95.62 1311 ambiguous_trans 8 ALIGNMENT 54 YS2-12h13.q1k chr07 32 320 565830 566119 F 289 74.39 1311 reject_low 37 ALIGNMENT 694 YS2-12h13.p1k chr12 48 1057 11795 12807 F 1010 91.29 1339 ambiguous_tel 18 ALIGNMENT 706 YS2-12h13.p1k chr02 38 1057 6308 7329 F 1020 91.37 1339 ambiguous_tel 16 ALIGNMENT 227 YS2-12h13.p1k chr10 389 48 744767 745107 C 342 91.52 1339 ambiguous_tel 32 ALIGNMENT 654 YS2-12h13.p1k chr04 1092 38 1523843 1524907 C 1055 89.00 1339 ambiguous_tel 14 ALIGNMENT 0 YS2-12h13.p1k chr03 944 531 315588 315587 C 414 0.00 1339 ambiguous_tel 24 ALIGNMENT 155 YS2-12h13.p1k chr15 839 1057 11052 11275 F 219 90.87 1339 ambiguous_tel 28 ALIGNMENT 0 YS2-12h13.q1k chr04 321 847 990991 990990 F 527 0.00 1311 reject_low 35 ALIGNMENT 251 YS2-12h13.p1k chr14 38 388 7128 7478 F 351 93.16 1339 ambiguous_tel 29 ALIGNMENT 0 YS2-12h13.p1k chr15 944 535 1083722 1083721 C 410 0.00 1339 ambiguous_tel 25 ALIGNMENT 700 YS2-12h13.p1k chr14 1057 38 782556 783578 C 1020 91.27 1339 ambiguous_tel 17 ALIGNMENT 881 YS2-12h13.q1k chr07 30 1101 572782 573865 F 1072 95.62 1311 ambiguous_trans 7 ALIGNMENT 899 YS2-12h13.q1k chr15 30 1101 708101 709184 F 1072 96.18 1311 ambiguous_trans 0 ALIGNMENT 0 YS2-12h13.p1k chr11 475 338 665549 665542 C 138 0.00 1339 ambiguous_tel 38 ALIGNMENT 296 YS2-12h13.p1k chr03 530 39 315587 316078 C 492 89.02 1339 ambiguous_tel 24 ALIGNMENT 713 YS2-12h13.p1k chr11 39 1057 511 1530 F 1019 91.76 1339 ambiguous_tel 15 ALIGNMENT 62 YS2-12h13.q1k chr10 320 28 479610 479903 C 293 75.09 1311 reject_low 36 ALIGNMENT 0 YS2-12h13.p1k chr14 389 944 7478 7477 F 556 0.00 1339 ambiguous_tel 29 ALIGNMENT 893 YS2-12h13.q1k chr15 1101 30 971121 972204 C 1072 95.99 1311 ambiguous_trans 3 ALIGNMENT 878 YS2-12h13.q1k chr07 1101 30 812291 813374 C 1072 95.52 1311 ambiguous_trans 11 ALIGNMENT 339 YS2-12h13.p1k chr05 484 38 569448 569893 C 447 94.41 1339 ambiguous_tel 22 ALIGNMENT 893 YS2-12h13.q1k chr12 30 1101 979774 980857 F 1072 95.99 1311 ambiguous_trans 2 ALIGNMENT 308 YS2-12h13.p1k chr15 38 530 549 1039 F 493 89.86 1339 ambiguous_tel 23 ALIGNMENT 0 YS2-12h13.q1k chr01 321 847 164515 164514 F 527 0.00 1311 reject_low 34 ALIGNMENT 0 YS2-12h13.p1k chr10 944 390 744768 744767 C 555 0.00 1339 ambiguous_tel 32 ALIGNMENT 878 YS2-12h13.q1k chr03 1101 30 85649 86732 C 1072 95.52 1311 ambiguous_trans 9 ALIGNMENT 0 YS2-12h14.q1k vc_1 235 62 2513 2512 C 174 0.00 276 reject_low 2 ALIGNMENT 0 YS2-12h14.q1k chr16 276 236 406360 406359 C 41 0.00 276 accept_chi 0 ALIGNMENT 0 YS2-12h14.q1k vc_4 62 235 5831 5830 F 174 0.00 276 reject_low 5 ALIGNMENT 0 YS2-12h14.q1k vc_7 62 238 13525 13524 F 177 0.00 276 reject_low 7 ALIGNMENT 177 YS2-12h14.p1k chr16 32 226 406359 406555 F 195 97.95 244 accept_chi 1 ALIGNMENT 41 YS2-12h14.q1k vc_3 276 236 2472 2512 C 41 100.00 276 reject_low 4 ALIGNMENT 36 YS2-12h14.q1k vc_5 273 238 1 36 C 36 100.00 276 reject_low 8 ALIGNMENT 41 YS2-12h14.q1k vc_1 276 236 2472 2512 C 41 100.00 276 reject_low 2 ALIGNMENT 0 YS2-12h14.q1k vc_2 235 62 2146 2145 C 174 0.00 276 reject_low 3 ALIGNMENT 0 YS2-12h14.q1k vc_3 235 62 2513 2512 C 174 0.00 276 reject_low 4 ALIGNMENT 0 YS2-12h14.q1k vc_5 237 62 37 36 C 176 0.00 276 reject_low 8 ALIGNMENT 191 YS2-12h14.q1k chr16 235 38 406359 406555 C 198 99.49 276 accept_chi 0 ALIGNMENT 38 YS2-12h14.q1k vc_7 239 276 13525 13562 F 38 100.00 276 reject_low 7 ALIGNMENT 0 YS2-12h14.q1k vc_5 237 62 5064 5063 C 176 0.00 276 reject_low 6 ALIGNMENT 41 YS2-12h14.q1k vc_2 276 236 2105 2145 C 41 100.00 276 reject_low 3 ALIGNMENT 41 YS2-12h14.q1k vc_4 236 276 5831 5871 F 41 100.00 276 reject_low 5 ALIGNMENT 0 YS2-12h14.p1k chr16 227 244 406555 406554 F 18 0.00 244 accept_chi 1 ALIGNMENT 39 YS2-12h14.q1k vc_5 276 238 5025 5063 C 39 100.00 276 reject_low 6 ALIGNMENT 0 YS2-12h16.q1k vc_3 326 62 2513 2512 C 265 0.00 367 reject_low 4 ALIGNMENT 41 YS2-12h16.q1k vc_2 367 327 2105 2145 C 41 100.00 367 reject_low 3 ALIGNMENT 0 YS2-12h16.q1k vc_1 326 62 2513 2512 C 265 0.00 367 reject_low 2 ALIGNMENT 41 YS2-12h16.q1k vc_3 367 327 2472 2512 C 41 100.00 367 reject_low 4 ALIGNMENT 41 YS2-12h16.q1k vc_4 327 367 5831 5871 F 41 100.00 367 reject_low 5 ALIGNMENT 272 YS2-12h16.q1k chr04 326 39 1006310 1006597 C 288 98.96 367 accept_chi 1 ALIGNMENT 0 YS2-12h16.q1k vc_5 328 62 5064 5063 C 267 0.00 367 reject_low 6 ALIGNMENT 39 YS2-12h16.q1k vc_5 367 329 5025 5063 C 39 100.00 367 reject_low 6 ALIGNMENT 0 YS2-12h16.q1k vc_4 62 326 5831 5830 F 265 0.00 367 reject_low 5 ALIGNMENT 38 YS2-12h16.q1k vc_7 330 367 13525 13562 F 38 100.00 367 reject_low 7 ALIGNMENT 0 YS2-12h16.p1k chr04 317 334 1006597 1006596 F 18 0.00 334 accept_chi 0 ALIGNMENT 0 YS2-12h16.q1k vc_5 328 62 37 36 C 267 0.00 367 reject_low 8 ALIGNMENT 41 YS2-12h16.q1k vc_1 367 327 2472 2512 C 41 100.00 367 reject_low 2 ALIGNMENT 0 YS2-12h16.q1k vc_2 326 62 2146 2145 C 265 0.00 367 reject_low 3 ALIGNMENT 0 YS2-12h16.q1k vc_7 62 329 13525 13524 F 268 0.00 367 reject_low 7 ALIGNMENT 0 YS2-12h16.q1k chr04 367 327 1006311 1006310 C 41 0.00 367 accept_chi 1 ALIGNMENT 272 YS2-12h16.p1k chr04 29 316 1006310 1006597 F 288 98.96 334 accept_chi 0 ALIGNMENT 36 YS2-12h16.q1k vc_5 364 329 1 36 C 36 100.00 367 reject_low 8 ALIGNMENT 1036 YS2-12h17.p1k chr13 1277 33 93194 94437 C 1245 95.90 1353 accept 0 ALIGNMENT 978 YS2-12h17.q1k chr13 40 1128 89274 90369 F 1089 97.98 1368 accept 0 ALIGNMENT 0 YS2-12h18.p1k chr15 528 512 767017 767016 C 17 0.00 528 accept_chi 0 ALIGNMENT 0 YS2-12h18.q1k vc_4 62 505 5830 5829 F 444 0.00 547 reject_low 4 ALIGNMENT 471 YS2-12h18.q1k chr15 29 506 767016 767493 F 478 99.79 547 accept_chi 1 ALIGNMENT 0 YS2-12h18.q1k vc_5 508 62 5064 5063 C 447 0.00 547 reject_low 5 ALIGNMENT 36 YS2-12h18.q1k vc_5 544 509 1 36 C 36 100.00 547 reject_low 7 ALIGNMENT 42 YS2-12h18.q1k vc_1 547 506 2472 2513 C 42 100.00 547 reject_low 2 ALIGNMENT 0 YS2-12h18.q1k vc_3 505 62 2514 2513 C 444 0.00 547 reject_low 3 ALIGNMENT 42 YS2-12h18.q1k vc_4 506 547 5830 5871 F 42 100.00 547 reject_low 4 ALIGNMENT 0 YS2-12h18.q1k vc_1 505 62 2514 2513 C 444 0.00 547 reject_low 2 ALIGNMENT 0 YS2-12h18.q1k vc_5 508 62 37 36 C 447 0.00 547 reject_low 7 ALIGNMENT 39 YS2-12h18.q1k vc_5 547 509 5025 5063 C 39 100.00 547 reject_low 5 ALIGNMENT 471 YS2-12h18.p1k chr15 511 34 767016 767493 C 478 99.79 528 accept_chi 0 ALIGNMENT 0 YS2-12h18.q1k vc_7 62 509 13525 13524 F 448 0.00 547 reject_low 6 ALIGNMENT 38 YS2-12h18.q1k vc_7 510 547 13525 13562 F 38 100.00 547 reject_low 6 ALIGNMENT 0 YS2-12h18.q1k chr15 507 547 767493 767492 F 41 0.00 547 accept_chi 1 ALIGNMENT 42 YS2-12h18.q1k vc_3 547 506 2472 2513 C 42 100.00 547 reject_low 3 ALIGNMENT 0 YS2-12h19.q1k vc_4 62 229 5831 5830 F 168 0.00 270 reject_low 5 ALIGNMENT 0 YS2-12h19.q1k vc_1 229 62 2513 2512 C 168 0.00 270 reject_low 2 ALIGNMENT 0 YS2-12h19.q1k vc_3 229 62 2513 2512 C 168 0.00 270 reject_low 4 ALIGNMENT 0 YS2-12h19.q1k vc_5 231 62 5064 5063 C 170 0.00 270 reject_low 6 ALIGNMENT 0 YS2-12h19.q1k chr11 231 270 118574 118573 F 40 0.00 270 accept_chi 0 ALIGNMENT 41 YS2-12h19.q1k vc_1 270 230 2472 2512 C 41 100.00 270 reject_low 2 ALIGNMENT 39 YS2-12h19.q1k vc_5 270 232 5025 5063 C 39 100.00 270 reject_low 6 ALIGNMENT 0 YS2-12h19.q1k vc_2 229 62 2146 2145 C 168 0.00 270 reject_low 3 ALIGNMENT 0 YS2-12h19.q1k vc_7 62 232 13525 13524 F 171 0.00 270 reject_low 7 ALIGNMENT 181 YS2-12h19.q1k chr11 36 230 118380 118574 F 195 98.46 270 accept_chi 0 ALIGNMENT 0 YS2-12h19.q1k vc_5 231 62 37 36 C 170 0.00 270 reject_low 8 ALIGNMENT 41 YS2-12h19.q1k vc_2 270 230 2105 2145 C 41 100.00 270 reject_low 3 ALIGNMENT 36 YS2-12h19.q1k vc_5 267 232 1 36 C 36 100.00 270 reject_low 8 ALIGNMENT 41 YS2-12h19.q1k vc_4 230 270 5831 5871 F 41 100.00 270 reject_low 5 ALIGNMENT 168 YS2-12h19.p1k chr11 219 27 118380 118574 C 193 96.89 225 accept_chi 1 ALIGNMENT 41 YS2-12h19.q1k vc_3 270 230 2472 2512 C 41 100.00 270 reject_low 4 ALIGNMENT 38 YS2-12h19.q1k vc_7 233 270 13525 13562 F 38 100.00 270 reject_low 7 ALIGNMENT 0 YS2-12h23.q1k chr14 884 482 694235 694234 C 403 0.00 1323 reject_low 1 ALIGNMENT 0 YS2-12h23.q1k chr14 474 884 694273 694272 F 411 0.00 1323 reject_low 2 ALIGNMENT 0 YS2-12h23.q1k chr14 62 438 694239 694238 F 377 0.00 1323 reject_low 2 ALIGNMENT 20 YS2-12h23.q1k chr14 439 473 694239 694273 F 35 97.14 1323 reject_low 2 ALIGNMENT 20 YS2-12h23.q1k chr14 481 442 694234 694273 C 40 92.50 1323 reject_low 1 ALIGNMENT 0 YS2-12h23.q1k chr14 441 62 694274 694273 C 380 0.00 1323 reject_low 1 ALIGNMENT 896 YS2-12h23.q1k chr11 29 1167 114365 115501 F 1139 94.29 1323 accept 0 ALIGNMENT 1012 YS2-12h23.p1k chr11 1218 35 117517 118698 C 1184 95.86 1293 accept 0 ALIGNMENT 71 YS2-12h24.q1k vc_4 1085 1229 6353 6504 F 145 84.83 1309 reject_low 7 ALIGNMENT 0 YS2-12h24.q1k vc_1 1046 62 2512 2511 C 985 0.00 1309 reject_low 9 ALIGNMENT 0 YS2-12h24.q1k vc_4 62 1046 5832 5831 F 985 0.00 1309 reject_low 7 ALIGNMENT 74 YS2-12h24.q1k vc_3 1085 1269 2531 2725 F 185 82.16 1309 reject_low 3 ALIGNMENT 56 YS2-12h24.q1k vc_4 1167 1085 1447 1534 C 83 91.57 1309 reject_low 8 ALIGNMENT 27 YS2-12h24.q1k vc_4 1047 1082 5832 5867 F 36 94.44 1309 reject_low 7 ALIGNMENT 946 YS2-12h24.p1k chr07 1069 63 928172 929175 C 1007 99.11 1306 accept_chi 1 ALIGNMENT 0 YS2-12h24.q1k vc_3 62 1084 2531 2530 F 1023 0.00 1309 reject_low 3 ALIGNMENT 0 YS2-12h24.q1k vc_5 62 1084 2398 2397 F 1023 0.00 1309 reject_low 5 ALIGNMENT 0 YS2-12h24.q1k vc_4 62 1084 126 125 F 1023 0.00 1309 reject_low 6 ALIGNMENT 0 YS2-12h24.q1k vc_4 1084 62 1535 1534 C 1023 0.00 1309 reject_low 8 ALIGNMENT 26 YS2-12h24.q1k vc_5 1082 1048 5029 5063 C 35 94.29 1309 reject_low 12 ALIGNMENT 71 YS2-12h24.q1k vc_4 1085 1229 126 277 F 145 84.83 1309 reject_low 6 ALIGNMENT 0 YS2-12h24.q1k vc_4 1084 62 5813 5812 C 1023 0.00 1309 reject_low 4 ALIGNMENT 0 YS2-12h24.q1k vc_4 1083 1084 5868 6352 F 2 0.00 1309 reject_low 7 ALIGNMENT 27 YS2-12h24.q1k vc_3 1082 1047 2476 2511 C 36 94.44 1309 reject_low 10 ALIGNMENT 74 YS2-12h24.q1k vc_4 1269 1085 5618 5812 C 185 82.70 1309 reject_low 4 ALIGNMENT 959 YS2-12h24.q1k chr07 41 1046 928172 929180 F 1006 99.30 1309 accept_chi 0 ALIGNMENT 0 YS2-12h24.q1k vc_1 62 1084 2531 2530 F 1023 0.00 1309 reject_low 2 ALIGNMENT 74 YS2-12h24.q1k vc_1 1085 1269 2531 2725 F 185 82.16 1309 reject_low 2 ALIGNMENT 0 YS2-12h24.q1k vc_3 1046 62 2512 2511 C 985 0.00 1309 reject_low 10 ALIGNMENT 27 YS2-12h24.q1k vc_1 1082 1047 2476 2511 C 36 94.44 1309 reject_low 9 ALIGNMENT 74 YS2-12h24.q1k vc_5 1085 1269 2398 2592 F 185 82.16 1309 reject_low 5 ALIGNMENT 0 YS2-12h24.q1k vc_5 1047 62 37 36 C 986 0.00 1309 reject_low 11 ALIGNMENT 0 YS2-12h24.q1k vc_5 1047 62 5064 5063 C 986 0.00 1309 reject_low 12 ALIGNMENT 26 YS2-12h24.q1k vc_5 1082 1048 2 36 C 35 94.29 1309 reject_low 11 ALIGNMENT 510 YS2-12i01.p1k chr07 45 1034 314603 315585 F 990 85.05 1328 accept_chi 1 ALIGNMENT 947 YS2-12i01.q1k chr04 1105 39 738672 739752 C 1067 97.28 1287 accept_chi 0 ALIGNMENT 372 YS2-12i03.p1k chr12 687 53 458478 459068 C 635 90.08 1422 reject_low 4 ALIGNMENT 1027 YS2-12i03.q1k chr12 32 1244 463910 465130 F 1213 96.04 1364 accept 1 ALIGNMENT 603 YS2-12i03.p1k chr12 1188 245 457965 458876 C 944 90.89 1422 reject_low 2 ALIGNMENT 610 YS2-12i03.p1k chr12 1188 238 467102 468020 C 951 90.96 1422 accept 0,1 ALIGNMENT 377 YS2-12i03.p1k chr12 692 53 467610 468205 C 640 90.16 1422 reject_low 3 ALIGNMENT 0 YS2-12i03.p1k chr12 237 164 468021 468020 C 74 0.00 1422 accept 0,1 ALIGNMENT 1027 YS2-12i03.q1k chr12 32 1244 454773 455993 F 1213 96.04 1364 accept 0 ALIGNMENT 0 YS2-12i03.p1k chr12 909 688 458479 458478 C 222 0.00 1422 reject_low 4 ALIGNMENT 0 YS2-12i03.p1k chr12 909 693 467611 467610 C 217 0.00 1422 reject_low 3 ALIGNMENT 0 YS2-12i03.p1k chr12 244 164 458877 458876 C 81 0.00 1422 reject_low 2 ALIGNMENT 975 YS2-12i04.q1k chr05 39 1177 226400 227552 F 1139 97.01 1377 accept 0 ALIGNMENT 987 YS2-12i05.p1k chr10 1176 61 558685 559816 C 1116 96.95 1355 accept 0 ALIGNMENT 1045 YS2-12i05.q1k chr10 44 1249 555027 556241 F 1206 96.52 1373 accept 0 ALIGNMENT 513 YS2-12i06.p1k chr04 973 180 591251 592030 C 794 90.43 1386 accept 0 ALIGNMENT 883 YS2-12i06.q1k chr04 38 1101 587365 588453 F 1064 96.05 1380 accept 0 ALIGNMENT 861 YS2-12i07.p1k chr08 60 1258 212118 213331 F 1199 92.08 1383 accept 0 ALIGNMENT 0 YS2-12i07.p1k chr08 122 197 214266 214265 F 76 0.00 1383 reject_low 1 ALIGNMENT 998 YS2-12i07.q1k chr08 1156 38 217367 218502 C 1119 96.69 1366 accept 0 ALIGNMENT 764 YS2-12i07.p1k chr08 198 1159 214266 215223 F 962 94.28 1383 reject_low 1 ALIGNMENT 626 YS2-12i08.p1k chr10 692 30 590283 590945 C 663 99.40 710 accept_chi 1 ALIGNMENT 0 YS2-12i08.p1k chr10 710 693 590284 590283 C 18 0.00 710 accept_chi 1 ALIGNMENT 628 YS2-12i08.q1k chr10 29 694 590283 590949 F 666 99.40 695 accept_chi 0 ALIGNMENT 1037 YS2-12i09.p1k chr04 1266 57 1292544 1293762 C 1210 96.36 1359 accept 0 ALIGNMENT 993 YS2-12i09.q1k chr04 38 1173 1289066 1290215 F 1136 96.30 1354 accept 0 ALIGNMENT 906 YS2-12i10.p1k chr04 1143 30 547706 548838 C 1114 96.05 1350 accept 0 ALIGNMENT 1018 YS2-12i10.q1k chr04 36 1169 546453 547595 F 1134 96.83 1412 accept 0 ALIGNMENT 930 YS2-12i12.p1k chr08 1150 31 448437 449562 C 1120 95.80 1346 accept 0 ALIGNMENT 895 YS2-12i12.q1k chr08 38 1113 444706 445794 F 1076 95.72 1346 accept 0 ALIGNMENT 981 YS2-12i14.p1k chr04 1143 28 824979 826104 C 1116 97.40 1347 accept 0 ALIGNMENT 905 YS2-12i14.q1k chr04 37 1114 822260 823344 F 1078 95.73 1348 accept 0 ALIGNMENT 35 YS2-12i15.q1k vc_5 1071 1036 5028 5063 C 36 97.22 1360 reject_low 19 ALIGNMENT 0 YS2-12i15.p1k chr04 929 779 427494 427493 C 151 0.00 1337 reject_low 8,9 ALIGNMENT 0 YS2-12i15.q1k vc_3 62 1078 2534 2533 F 1017 0.00 1360 reject_low 4 ALIGNMENT 0 YS2-12i15.p1k chr04 695 62 427576 427575 C 634 0.00 1337 reject_low 8,9 ALIGNMENT 77 YS2-12i15.q1k vc_7 1273 1079 2518 2724 C 195 82.56 1360 reject_low 7 ALIGNMENT 967 YS2-12i15.p1k chr04 1039 29 427125 428133 C 1011 99.01 1337 reject_low 1 ALIGNMENT 0 YS2-12i15.q1k chr04 419 893 427572 427571 F 475 0.00 1360 reject_low 8 ALIGNMENT 0 YS2-12i15.q1k vc_5 1035 62 37 36 C 974 0.00 1360 reject_low 18 ALIGNMENT 0 YS2-12i15.p1k chr04 587 62 427468 427467 C 526 0.00 1337 reject_low 14 ALIGNMENT 0 YS2-12i15.p1k chr04 590 62 427519 427518 C 529 0.00 1337 reject_low 11 ALIGNMENT 77 YS2-12i15.q1k vc_1 1079 1273 2534 2740 F 195 82.56 1360 reject_low 3 ALIGNMENT 53 YS2-12i15.p1k chr04 778 696 427493 427575 C 83 91.57 1337 reject_low 8,9 ALIGNMENT 0 YS2-12i15.q1k vc_5 1035 62 5064 5063 C 974 0.00 1360 reject_low 19 ALIGNMENT 36 YS2-12i15.q1k vc_3 1071 1035 2475 2511 C 37 97.30 1360 reject_low 17 ALIGNMENT 0 YS2-12i15.p1k chr04 644 62 427573 427572 C 583 0.00 1337 accept 0 reject_low 2 ALIGNMENT 0 YS2-12i15.q1k chr04 62 284 427493 427492 F 223 0.00 1360 reject_low 15 ALIGNMENT 53 YS2-12i15.q1k chr04 285 367 427493 427575 F 83 91.57 1360 reject_low 15 ALIGNMENT 75 YS2-12i15.q1k vc_4 1079 1219 6356 6502 F 141 86.52 1360 reject_low 12 ALIGNMENT 0 YS2-12i15.q1k chr04 368 893 427575 427574 F 526 0.00 1360 reject_low 15 ALIGNMENT 0 YS2-12i15.p1k chr04 929 725 427386 427385 C 205 0.00 1337 reject_low 11 ALIGNMENT 0 YS2-12i15.q1k chr04 62 284 427439 427438 F 223 0.00 1360 reject_low 8 ALIGNMENT 960 YS2-12i15.q1k chr04 31 1033 427128 428133 F 1003 98.90 1360 accept 0 ALIGNMENT 0 YS2-12i15.q1k vc_5 62 1078 2401 2400 F 1017 0.00 1360 reject_low 6 ALIGNMENT 34 YS2-12i15.q1k vc_7 1037 1071 13525 13559 F 35 97.14 1360 reject_low 20 ALIGNMENT 59 YS2-12i15.q1k vc_4 1157 1079 1452 1531 C 79 92.41 1360 reject_low 13 ALIGNMENT 0 YS2-12i15.q1k chr04 473 893 427518 427517 F 421 0.00 1360 reject_low 2 ALIGNMENT 0 YS2-12i15.q1k vc_1 62 1078 2534 2533 F 1017 0.00 1360 reject_low 3 ALIGNMENT 0 YS2-12i15.q1k vc_1 1034 62 2512 2511 C 973 0.00 1360 reject_low 16 ALIGNMENT 0 YS2-12i15.p1k chr04 929 671 427386 427385 C 259 0.00 1337 reject_low 14 ALIGNMENT 0 YS2-12i15.q1k chr04 476 893 427467 427466 F 418 0.00 1360 reject_low 9 ALIGNMENT 35 YS2-12i15.q1k vc_5 1071 1036 1 36 C 36 97.22 1360 reject_low 18 ALIGNMENT 0 YS2-12i15.p1k chr04 929 779 427440 427439 C 151 0.00 1337 accept 0 reject_low 2 ALIGNMENT 89 YS2-12i15.p1k chr04 778 645 427439 427572 C 134 92.54 1337 accept 0 reject_low 2 ALIGNMENT 36 YS2-12i15.q1k vc_4 1035 1071 5832 5868 F 37 97.30 1360 reject_low 12 ALIGNMENT 88 YS2-12i15.p1k chr04 724 591 427385 427518 C 134 92.54 1337 reject_low 11 ALIGNMENT 77 YS2-12i15.q1k vc_4 1273 1079 5603 5809 C 195 82.56 1360 reject_low 5 ALIGNMENT 0 YS2-12i15.q1k chr04 62 392 427385 427384 F 331 0.00 1360 reject_low 9 ALIGNMENT 0 YS2-12i15.q1k vc_3 1034 62 2512 2511 C 973 0.00 1360 reject_low 17 ALIGNMENT 0 YS2-12i15.q1k vc_4 1072 1078 5869 6355 F 7 0.00 1360 reject_low 12 ALIGNMENT 77 YS2-12i15.q1k vc_3 1079 1273 2534 2740 F 195 82.56 1360 reject_low 4 ALIGNMENT 55 YS2-12i15.p1k chr04 670 588 427385 427467 C 83 92.77 1337 reject_low 14 ALIGNMENT 0 YS2-12i15.q1k vc_7 62 1036 13525 13524 F 975 0.00 1360 reject_low 20 ALIGNMENT 0 YS2-12i15.q1k vc_4 62 1034 5832 5831 F 973 0.00 1360 reject_low 12 ALIGNMENT 0 YS2-12i15.q1k vc_4 62 1078 129 128 F 1017 0.00 1360 reject_low 10 ALIGNMENT 75 YS2-12i15.q1k vc_4 1079 1219 129 275 F 141 86.52 1360 reject_low 10 ALIGNMENT 0 YS2-12i15.q1k vc_4 1078 62 1532 1531 C 1017 0.00 1360 reject_low 13 ALIGNMENT 89 YS2-12i15.q1k chr04 285 418 427439 427572 F 134 92.54 1360 reject_low 8 ALIGNMENT 0 YS2-12i15.q1k chr04 62 338 427385 427384 F 277 0.00 1360 reject_low 2 ALIGNMENT 77 YS2-12i15.q1k vc_5 1079 1273 2401 2607 F 195 82.56 1360 reject_low 6 ALIGNMENT 55 YS2-12i15.q1k chr04 393 475 427385 427467 F 83 92.77 1360 reject_low 9 ALIGNMENT 0 YS2-12i15.q1k vc_7 1078 62 2725 2724 C 1017 0.00 1360 reject_low 7 ALIGNMENT 88 YS2-12i15.q1k chr04 339 472 427385 427518 F 134 92.54 1360 reject_low 2 ALIGNMENT 36 YS2-12i15.q1k vc_1 1071 1035 2475 2511 C 37 97.30 1360 reject_low 16 ALIGNMENT 0 YS2-12i15.q1k vc_4 1078 62 5810 5809 C 1017 0.00 1360 reject_low 5 ALIGNMENT 1019 YS2-12i17.p1k chr05 1232 32 319564 320773 C 1201 96.17 1281 accept_chi 0 ALIGNMENT 1006 YS2-12i17.q1k chr08 1181 38 317934 319085 C 1144 96.42 1326 accept_chi 1 ALIGNMENT 0 YS2-12i19.q1k chr13 901 424 917493 917492 C 478 0.00 1359 reject_low 1 ALIGNMENT 367 YS2-12i19.q1k chr13 423 31 917492 917884 C 393 98.47 1359 reject_low 1 ALIGNMENT 1006 YS2-12i19.q1k chr16 31 1279 25757 27007 F 1249 94.56 1359 accept 0 ALIGNMENT 952 YS2-12i19.p1k chr16 1168 31 28897 30030 C 1138 95.69 1251 accept 0 ALIGNMENT 24 YS2-12i20.q1k chr01 429 383 107781 107827 C 47 85.11 1374 reject_low 1 ALIGNMENT 54 YS2-12i20.q1k chr01 290 28 107920 108182 C 263 74.52 1374 reject_low 1 ALIGNMENT 1067 YS2-12i20.q1k chr15 28 1215 916374 917575 F 1188 97.31 1374 accept 0 ALIGNMENT 0 YS2-12i20.q1k chr01 382 291 107828 107919 C 92 0.00 1374 reject_low 1 ALIGNMENT 1067 YS2-12i20.p1k chr15 1255 29 918120 919360 C 1227 96.66 1293 accept 0 ALIGNMENT 0 YS2-12i20.q1k chr01 828 430 107782 107781 C 399 0.00 1374 reject_low 1 ALIGNMENT 20 YS2-12i21.p1k chr13 855 822 239354 239387 C 34 100.00 1305 reject_low 1 ALIGNMENT 1020 YS2-12i21.q1k chr07 39 1311 75315 76595 F 1273 94.74 1324 accept 0 ALIGNMENT 0 YS2-12i21.p1k chr13 888 856 239355 239354 C 33 0.00 1305 reject_low 1 ALIGNMENT 1023 YS2-12i21.p1k chr07 1180 30 78667 79830 C 1151 97.57 1305 accept 0 ALIGNMENT 0 YS2-12i21.p1k chr13 821 62 239388 239387 C 760 0.00 1305 reject_low 1 ALIGNMENT 41 YS2-12i22.q1k vc_1 297 257 2472 2512 C 41 100.00 297 reject_low 1 ALIGNMENT 0 YS2-12i22.p1k chr02 255 239 103002 103001 C 17 0.00 255 accept 0 ALIGNMENT 41 YS2-12i22.q1k vc_4 257 297 5831 5871 F 41 100.00 297 reject_low 4 ALIGNMENT 0 YS2-12i22.q1k vc_4 62 256 5831 5830 F 195 0.00 297 reject_low 4 ALIGNMENT 36 YS2-12i22.q1k vc_5 294 259 1 36 C 36 100.00 297 reject_low 7 ALIGNMENT 38 YS2-12i22.q1k vc_7 260 297 13525 13562 F 38 100.00 297 reject_low 6 ALIGNMENT 0 YS2-12i22.q1k vc_7 62 259 13525 13524 F 198 0.00 297 reject_low 6 ALIGNMENT 41 YS2-12i22.q1k vc_3 297 257 2472 2512 C 41 100.00 297 reject_low 3 ALIGNMENT 208 YS2-12i22.q1k chr02 35 256 102999 103220 F 222 99.55 297 accept 0 ALIGNMENT 0 YS2-12i22.q1k chr02 257 297 103220 103219 F 41 0.00 297 accept 0 ALIGNMENT 41 YS2-12i22.q1k vc_2 297 257 2105 2145 C 41 100.00 297 reject_low 2 ALIGNMENT 0 YS2-12i22.q1k vc_3 256 62 2513 2512 C 195 0.00 297 reject_low 3 ALIGNMENT 0 YS2-12i22.q1k vc_5 258 62 37 36 C 197 0.00 297 reject_low 7 ALIGNMENT 0 YS2-12i22.q1k vc_5 258 62 5064 5063 C 197 0.00 297 reject_low 5 ALIGNMENT 186 YS2-12i22.p1k chr02 238 39 103001 103201 C 200 99.50 255 accept 0 ALIGNMENT 0 YS2-12i22.q1k vc_2 256 62 2146 2145 C 195 0.00 297 reject_low 2 ALIGNMENT 0 YS2-12i22.q1k vc_1 256 62 2513 2512 C 195 0.00 297 reject_low 1 ALIGNMENT 39 YS2-12i22.q1k vc_5 297 259 5025 5063 C 39 100.00 297 reject_low 5 ALIGNMENT 986 YS2-12i24.p1k chr08 31 1160 428385 429520 F 1130 96.90 1212 accept 0 ALIGNMENT 944 YS2-12i24.q1k chr07 1178 41 13074 14229 C 1138 94.90 1234 ambiguous_tel 1 ALIGNMENT 857 YS2-12j02.q1k chr12 52 1267 459884 461144 F 1216 92.02 1418 accept 0 ALIGNMENT 0 YS2-12j02.q1k chr12 62 696 451419 451418 F 635 0.00 1418 reject_low 1 ALIGNMENT 1045 YS2-12j02.p1k chr12 1249 29 463460 464682 C 1221 95.50 1327 accept 0 ALIGNMENT 91 YS2-12j02.q1k chr12 1052 1267 489754 489975 F 216 82.41 1418 reject_low 2 ALIGNMENT 1040 YS2-12j02.p1k chr12 1232 29 454342 455545 C 1204 95.68 1327 reject_low 1 ALIGNMENT 0 YS2-12j02.q1k chr12 62 1051 489754 489753 F 990 0.00 1418 reject_low 2 ALIGNMENT 354 YS2-12j02.q1k chr12 697 1267 451419 452007 F 571 89.49 1418 reject_low 1 ALIGNMENT 913 YS2-12j03.p1k chr07 1091 53 492429 493474 C 1039 96.15 1428 accept 0 ALIGNMENT 992 YS2-12j03.q1k chr07 40 1119 489198 490283 F 1080 98.33 1387 accept 0 ALIGNMENT 0 YS2-12j04.q1k vc_3 320 62 2513 2512 C 259 0.00 361 reject_low 4 ALIGNMENT 0 YS2-12j04.q1k chr16 361 322 926010 926009 C 40 0.00 361 ambiguous_tel 0 ALIGNMENT 0 YS2-12j04.q1k vc_4 62 320 5831 5830 F 259 0.00 361 reject_low 5 ALIGNMENT 0 YS2-12j04.q1k vc_1 320 62 2513 2512 C 259 0.00 361 reject_low 2 ALIGNMENT 39 YS2-12j04.q1k vc_5 361 323 5025 5063 C 39 100.00 361 reject_low 6 ALIGNMENT 0 YS2-12j04.q1k vc_7 62 323 13525 13524 F 262 0.00 361 reject_low 7 ALIGNMENT 36 YS2-12j04.q1k vc_5 358 323 1 36 C 36 100.00 361 reject_low 8 ALIGNMENT 41 YS2-12j04.q1k vc_2 361 321 2105 2145 C 41 100.00 361 reject_low 3 ALIGNMENT 262 YS2-12j04.p1k chr16 26 310 926009 926293 F 285 97.89 327 ambiguous_tel 1 ALIGNMENT 41 YS2-12j04.q1k vc_1 361 321 2472 2512 C 41 100.00 361 reject_low 2 ALIGNMENT 0 YS2-12j04.p1k chr16 311 327 926293 926292 F 17 0.00 327 ambiguous_tel 1 ALIGNMENT 0 YS2-12j04.q1k vc_2 320 62 2146 2145 C 259 0.00 361 reject_low 3 ALIGNMENT 41 YS2-12j04.q1k vc_4 321 361 5831 5871 F 41 100.00 361 reject_low 5 ALIGNMENT 38 YS2-12j04.q1k vc_7 324 361 13525 13562 F 38 100.00 361 reject_low 7 ALIGNMENT 41 YS2-12j04.q1k vc_3 361 321 2472 2512 C 41 100.00 361 reject_low 4 ALIGNMENT 0 YS2-12j04.q1k vc_5 322 62 37 36 C 261 0.00 361 reject_low 8 ALIGNMENT 273 YS2-12j04.q1k chr16 321 37 926009 926293 C 285 99.30 361 ambiguous_tel 0 ALIGNMENT 0 YS2-12j04.q1k vc_5 322 62 5064 5063 C 261 0.00 361 reject_low 6 ALIGNMENT 223 YS2-12j06.q1k chr08 38 290 54680 54930 F 253 98.81 330 accept_chi 1 ALIGNMENT 36 YS2-12j06.q1k vc_5 327 292 1 36 C 36 100.00 330 reject_low 8 ALIGNMENT 0 YS2-12j06.q1k vc_5 291 62 5064 5063 C 230 0.00 330 reject_low 6 ALIGNMENT 41 YS2-12j06.q1k vc_3 330 290 2472 2512 C 41 100.00 330 reject_low 4 ALIGNMENT 0 YS2-12j06.q1k vc_3 289 62 2513 2512 C 228 0.00 330 reject_low 4 ALIGNMENT 0 YS2-12j06.q1k chr08 291 330 54930 54929 F 40 0.00 330 accept_chi 1 ALIGNMENT 41 YS2-12j06.q1k vc_2 330 290 2105 2145 C 41 100.00 330 reject_low 3 ALIGNMENT 0 YS2-12j06.q1k vc_4 62 289 5831 5830 F 228 0.00 330 reject_low 5 ALIGNMENT 41 YS2-12j06.q1k vc_1 330 290 2472 2512 C 41 100.00 330 reject_low 2 ALIGNMENT 41 YS2-12j06.q1k vc_4 290 330 5831 5871 F 41 100.00 330 reject_low 5 ALIGNMENT 0 YS2-12j06.q1k vc_1 289 62 2513 2512 C 228 0.00 330 reject_low 2 ALIGNMENT 39 YS2-12j06.q1k vc_5 330 292 5025 5063 C 39 100.00 330 reject_low 6 ALIGNMENT 0 YS2-12j06.p1k chr08 291 273 54681 54680 C 19 0.00 291 accept_chi 0 ALIGNMENT 0 YS2-12j06.q1k vc_5 291 62 37 36 C 230 0.00 330 reject_low 8 ALIGNMENT 38 YS2-12j06.q1k vc_7 293 330 13525 13562 F 38 100.00 330 reject_low 7 ALIGNMENT 0 YS2-12j06.q1k vc_7 62 292 13525 13524 F 231 0.00 330 reject_low 7 ALIGNMENT 0 YS2-12j06.q1k vc_2 289 62 2146 2145 C 228 0.00 330 reject_low 3 ALIGNMENT 226 YS2-12j06.p1k chr08 272 23 54680 54930 C 250 99.20 291 accept_chi 0 ALIGNMENT 869 YS2-12j07.q1k chr14 1049 39 235461 236485 C 1011 96.93 1322 accept 0 ALIGNMENT 858 YS2-12j07.p1k chr14 37 1112 233611 234684 F 1076 94.70 1359 accept 0 ALIGNMENT 0 YS2-12j08.q1k vc_7 62 261 13525 13524 F 200 0.00 299 reject_low 6 ALIGNMENT 41 YS2-12j08.q1k vc_4 259 299 5831 5871 F 41 100.00 299 reject_low 4 ALIGNMENT 207 YS2-12j08.p1k chr05 266 30 33549 33784 C 237 97.89 285 accept_chi 1 ALIGNMENT 36 YS2-12j08.q1k vc_5 296 261 1 36 C 36 100.00 299 reject_low 7 ALIGNMENT 41 YS2-12j08.q1k vc_1 299 259 2472 2512 C 41 100.00 299 reject_low 2 ALIGNMENT 0 YS2-12j08.q1k chr05 259 299 33784 33783 F 41 0.00 299 accept_chi 0 ALIGNMENT 41 YS2-12j08.q1k vc_3 299 259 2472 2512 C 41 100.00 299 reject_low 3 ALIGNMENT 0 YS2-12j08.q1k vc_4 62 258 5831 5830 F 197 0.00 299 reject_low 4 ALIGNMENT 38 YS2-12j08.q1k vc_7 262 299 13525 13562 F 38 100.00 299 reject_low 6 ALIGNMENT 0 YS2-12j08.q1k vc_3 258 62 2513 2512 C 197 0.00 299 reject_low 3 ALIGNMENT 220 YS2-12j08.q1k chr05 26 258 33552 33784 F 233 100.00 299 accept_chi 0 ALIGNMENT 0 YS2-12j08.p1k chr05 285 267 33550 33549 C 19 0.00 285 accept_chi 1 ALIGNMENT 39 YS2-12j08.q1k vc_5 299 261 5025 5063 C 39 100.00 299 reject_low 5 ALIGNMENT 0 YS2-12j08.q1k vc_5 260 62 37 36 C 199 0.00 299 reject_low 7 ALIGNMENT 0 YS2-12j08.q1k vc_5 260 62 5064 5063 C 199 0.00 299 reject_low 5 ALIGNMENT 0 YS2-12j08.q1k vc_1 258 62 2513 2512 C 197 0.00 299 reject_low 2 ALIGNMENT 42 YS2-12j09.q1k vc_1 383 342 2472 2513 C 42 100.00 383 reject_low 1 ALIGNMENT 36 YS2-12j09.q1k vc_5 380 345 1 36 C 36 100.00 383 reject_low 6 ALIGNMENT 290 YS2-12j09.q1k chr02 342 38 629919 630224 C 305 98.69 383 accept 0 ALIGNMENT 0 YS2-12j09.q1k vc_3 341 62 2514 2513 C 280 0.00 383 reject_low 2 ALIGNMENT 0 YS2-12j09.q1k chr02 383 343 629920 629919 C 41 0.00 383 accept 0 ALIGNMENT 0 YS2-12j09.q1k vc_4 62 341 5830 5829 F 280 0.00 383 reject_low 3 ALIGNMENT 0 YS2-12j09.q1k vc_5 344 62 37 36 C 283 0.00 383 reject_low 6 ALIGNMENT 0 YS2-12j09.p1k chr02 339 357 630224 630223 F 19 0.00 357 accept 0 ALIGNMENT 297 YS2-12j09.p1k chr02 28 338 629914 630224 F 311 98.71 357 accept 0 ALIGNMENT 0 YS2-12j09.q1k vc_7 62 345 13525 13524 F 284 0.00 383 reject_low 5 ALIGNMENT 42 YS2-12j09.q1k vc_4 342 383 5830 5871 F 42 100.00 383 reject_low 3 ALIGNMENT 42 YS2-12j09.q1k vc_3 383 342 2472 2513 C 42 100.00 383 reject_low 2 ALIGNMENT 39 YS2-12j09.q1k vc_5 383 345 5025 5063 C 39 100.00 383 reject_low 4 ALIGNMENT 38 YS2-12j09.q1k vc_7 346 383 13525 13562 F 38 100.00 383 reject_low 5 ALIGNMENT 0 YS2-12j09.q1k vc_5 344 62 5064 5063 C 283 0.00 383 reject_low 4 ALIGNMENT 0 YS2-12j09.q1k vc_1 341 62 2514 2513 C 280 0.00 383 reject_low 1 ALIGNMENT 989 YS2-12j10.q1k chr12 38 1152 453057 454186 F 1115 96.77 1385 accept 0 ALIGNMENT 989 YS2-12j10.q1k chr12 38 1152 462194 463323 F 1115 96.77 1385 accept 1 ALIGNMENT 1010 YS2-12j10.p1k chr12 1199 35 457434 458608 C 1165 96.22 1380 accept 0 ALIGNMENT 1010 YS2-12j10.p1k chr12 1199 35 466571 467745 C 1165 96.22 1380 accept 1 ALIGNMENT 0 YS2-12j11.q1k vc_4 62 540 5831 5830 F 479 0.00 581 reject_low 5 ALIGNMENT 0 YS2-12j11.q1k vc_2 540 62 2146 2145 C 479 0.00 581 reject_low 3 ALIGNMENT 36 YS2-12j11.q1k vc_5 578 543 1 36 C 36 100.00 581 reject_low 8 ALIGNMENT 41 YS2-12j11.q1k vc_3 581 541 2472 2512 C 41 100.00 581 reject_low 4 ALIGNMENT 0 YS2-12j11.q1k vc_5 542 62 5064 5063 C 481 0.00 581 reject_low 6 ALIGNMENT 0 YS2-12j11.q1k vc_7 62 543 13525 13524 F 482 0.00 581 reject_low 7 ALIGNMENT 38 YS2-12j11.q1k vc_7 544 581 13525 13562 F 38 100.00 581 reject_low 7 ALIGNMENT 41 YS2-12j11.q1k vc_1 581 541 2472 2512 C 41 100.00 581 reject_low 2 ALIGNMENT 39 YS2-12j11.q1k vc_5 581 543 5025 5063 C 39 100.00 581 reject_low 6 ALIGNMENT 0 YS2-12j11.q1k vc_1 540 62 2513 2512 C 479 0.00 581 reject_low 2 ALIGNMENT 0 YS2-12j11.q1k vc_3 540 62 2513 2512 C 479 0.00 581 reject_low 4 ALIGNMENT 0 YS2-12j11.q1k chr15 539 581 449765 449764 F 43 0.00 581 accept_chi 1 ALIGNMENT 0 YS2-12j11.p1k chr15 551 533 449267 449266 C 19 0.00 551 accept_chi 0 ALIGNMENT 41 YS2-12j11.q1k vc_4 541 581 5831 5871 F 41 100.00 581 reject_low 5 ALIGNMENT 487 YS2-12j11.p1k chr15 532 34 449266 449765 C 499 99.60 551 accept_chi 0 ALIGNMENT 487 YS2-12j11.q1k chr15 40 538 449266 449765 F 499 99.60 581 accept_chi 1 ALIGNMENT 0 YS2-12j11.q1k vc_5 542 62 37 36 C 481 0.00 581 reject_low 8 ALIGNMENT 41 YS2-12j11.q1k vc_2 581 541 2105 2145 C 41 100.00 581 reject_low 3 ALIGNMENT 947 YS2-12j12.p1k chr10 1126 27 612208 613310 C 1100 96.45 1357 accept 0 ALIGNMENT 937 YS2-12j12.q1k chr10 36 1135 608627 609741 F 1100 95.18 1380 accept 0 ALIGNMENT 0 YS2-12j12.q1k chr16 183 875 654842 654841 F 693 0.00 1380 reject_low 1 ALIGNMENT 109 YS2-12j12.q1k chr16 36 182 654696 654842 F 147 91.84 1380 reject_low 1 ALIGNMENT 0 YS2-12j13.p1k chr04 335 62 218370 218369 C 274 0.00 1316 reject_low 1 ALIGNMENT 916 YS2-12j13.p1k chr04 1156 29 117683 118827 C 1128 95.12 1316 accept 0 ALIGNMENT 955 YS2-12j13.q1k chr04 34 1142 113800 114916 F 1109 95.58 1407 accept 0 ALIGNMENT 0 YS2-12j13.p1k chr04 840 707 218000 217999 C 134 0.00 1316 reject_low 1 ALIGNMENT 349 YS2-12j13.p1k chr04 706 336 217999 218369 C 371 98.92 1316 reject_low 1 ALIGNMENT 247 YS2-12j14.p1k vc_7 1 479 13918 14394 F 479 85.39 524 reject_vc 7 ALIGNMENT 40 YS2-12j14.q1k vc_4 502 541 5832 5871 F 40 100.00 541 reject_low 13 ALIGNMENT 250 YS2-12j14.p1k vc_5 479 1 4193 4669 C 479 85.39 524 reject_vc 4 ALIGNMENT 449 YS2-12j14.q1k chr15 501 41 502927 503387 C 461 99.78 541 accept 0 ALIGNMENT 0 YS2-12j14.q1k chr15 541 502 502928 502927 C 40 0.00 541 accept 0 ALIGNMENT 0 YS2-12j14.q1k vc_5 502 62 5064 5063 C 441 0.00 541 reject_low 8 ALIGNMENT 20 YS2-12j14.q1k vc_2 37 18 2145 2164 C 20 100.00 541 reject_low 11 ALIGNMENT 21 YS2-12j14.q1k vc_5 38 18 2378 2398 C 21 100.00 541 reject_low 14 ALIGNMENT 250 YS2-12j14.p1k vc_2 479 1 1273 1749 C 479 85.39 524 reject_vc 2 ALIGNMENT 247 YS2-12j14.p1k vc_7 1 479 456 932 F 479 85.39 524 reject_vc 6 ALIGNMENT 38 YS2-12j14.q1k vc_7 504 541 13525 13562 F 38 100.00 541 reject_low 9 ALIGNMENT 20 YS2-12j14.q1k vc_4 18 37 5812 5831 F 20 100.00 541 reject_low 13 ALIGNMENT 250 YS2-12j14.p1k vc_3 479 1 1273 1749 C 479 85.39 524 reject_vc 3 ALIGNMENT 250 YS2-12j14.p1k vc_6 1 479 3712 4188 F 479 85.59 524 reject_vc 5 ALIGNMENT 0 YS2-12j14.q1k vc_1 501 38 2512 2511 C 464 0.00 541 reject_low 10 ALIGNMENT 39 YS2-12j14.q1k vc_5 541 503 5025 5063 C 39 100.00 541 reject_low 8 ALIGNMENT 36 YS2-12j14.q1k vc_5 538 503 1 36 C 36 100.00 541 reject_low 14 ALIGNMENT 40 YS2-12j14.q1k vc_2 541 502 2105 2144 C 40 100.00 541 reject_low 11 ALIGNMENT 0 YS2-12j14.q1k vc_2 501 38 2145 2144 C 464 0.00 541 reject_low 11 ALIGNMENT 0 YS2-12j14.q1k vc_7 62 503 13525 13524 F 442 0.00 541 reject_low 9 ALIGNMENT 40 YS2-12j14.q1k vc_3 541 502 2472 2511 C 40 100.00 541 reject_low 12 ALIGNMENT 40 YS2-12j14.q1k vc_1 541 502 2472 2511 C 40 100.00 541 reject_low 10 ALIGNMENT 20 YS2-12j14.q1k vc_3 37 18 2512 2531 C 20 100.00 541 reject_low 12 ALIGNMENT 0 YS2-12j14.q1k vc_5 502 39 37 2377 C 464 0.00 541 reject_low 14 ALIGNMENT 20 YS2-12j14.q1k vc_1 37 18 2512 2531 C 20 100.00 541 reject_low 10 ALIGNMENT 0 YS2-12j14.q1k vc_3 501 38 2512 2511 C 464 0.00 541 reject_low 12 ALIGNMENT 250 YS2-12j14.p1k vc_1 479 1 1273 1749 C 479 85.39 524 reject_vc 1 ALIGNMENT 0 YS2-12j14.q1k vc_4 38 501 5832 5831 F 464 0.00 541 reject_low 13 ALIGNMENT 0 YS2-12j15.q1k vc_5 280 62 5064 5063 C 219 0.00 319 reject_low 5 ALIGNMENT 0 YS2-12j15.q1k vc_3 278 62 2513 2512 C 217 0.00 319 reject_low 3 ALIGNMENT 41 YS2-12j15.q1k vc_4 279 319 5831 5871 F 41 100.00 319 reject_low 4 ALIGNMENT 243 YS2-12j15.p1k chr13 28 279 691206 691457 F 252 99.60 296 accept_chi 0 ALIGNMENT 0 YS2-12j15.q1k vc_4 62 278 5831 5830 F 217 0.00 319 reject_low 4 ALIGNMENT 0 YS2-12j15.p1k chr13 280 296 691457 691456 F 17 0.00 296 accept_chi 0 ALIGNMENT 0 YS2-12j15.q1k chr13 319 280 691207 691206 C 40 0.00 319 accept_chi 1 ALIGNMENT 0 YS2-12j15.q1k vc_5 280 62 37 36 C 219 0.00 319 reject_low 7 ALIGNMENT 39 YS2-12j15.q1k vc_5 319 281 5025 5063 C 39 100.00 319 reject_low 5 ALIGNMENT 241 YS2-12j15.q1k chr13 279 29 691206 691457 C 251 99.60 319 accept_chi 1 ALIGNMENT 36 YS2-12j15.q1k vc_5 316 281 1 36 C 36 100.00 319 reject_low 7 ALIGNMENT 38 YS2-12j15.q1k vc_7 282 319 13525 13562 F 38 100.00 319 reject_low 6 ALIGNMENT 41 YS2-12j15.q1k vc_3 319 279 2472 2512 C 41 100.00 319 reject_low 3 ALIGNMENT 0 YS2-12j15.q1k vc_7 62 281 13525 13524 F 220 0.00 319 reject_low 6 ALIGNMENT 41 YS2-12j15.q1k vc_1 319 279 2472 2512 C 41 100.00 319 reject_low 2 ALIGNMENT 0 YS2-12j15.q1k vc_1 278 62 2513 2512 C 217 0.00 319 reject_low 2 ALIGNMENT 940 YS2-12j16.q1k chr08 1132 30 494472 495591 C 1103 97.01 1355 accept 0 ALIGNMENT 884 YS2-12j16.p1k chr08 31 1013 491748 492742 F 983 98.17 1266 accept 0 ALIGNMENT 917 YS2-12j19.p1k chr04 1093 32 33483 34548 C 1062 96.52 1329 accept 0 ALIGNMENT 974 YS2-12j19.q1k chr04 39 1156 32134 33269 F 1118 96.15 1369 accept 0 ALIGNMENT 0 YS2-12j21.p1k vc_7 137 390 100 99 F 254 0.00 1366 reject_low 5 ALIGNMENT 0 YS2-12j21.p1k vc_6 137 618 3585 3584 F 482 0.00 1366 reject_low 8 ALIGNMENT 0 YS2-12j21.p1k vc_4 137 390 5871 5870 F 254 0.00 1366 reject_low 7 ALIGNMENT 0 YS2-12j21.p1k chr05 490 372 419998 419997 C 119 0.00 1366 accept 0 ALIGNMENT 0 YS2-12j21.p1k vc_3 390 137 2106 2105 C 254 0.00 1366 reject_low 3 ALIGNMENT 0 YS2-12j21.p1k vc_3 490 422 2442 2441 C 69 0.00 1366 reject_low 10 ALIGNMENT 236 YS2-12j21.p1k vc_6 619 956 3585 3918 F 338 90.83 1366 reject_low 8 ALIGNMENT 427 YS2-12j21.p1k vc_5 956 391 4463 5025 C 566 92.40 1366 reject_low 4 ALIGNMENT 427 YS2-12j21.p1k vc_2 956 391 1543 2105 C 566 92.40 1366 reject_low 2 ALIGNMENT 0 YS2-12j21.p1k vc_5 390 137 5026 5025 C 254 0.00 1366 reject_low 4 ALIGNMENT 23 YS2-12j21.p1k vc_1 421 391 2441 2472 C 31 93.55 1366 reject_low 9 ALIGNMENT 0 YS2-12j21.p1k vc_1 390 137 2106 2105 C 254 0.00 1366 reject_low 1 ALIGNMENT 23 YS2-12j21.p1k vc_3 421 391 2441 2472 C 31 93.55 1366 reject_low 10 ALIGNMENT 0 YS2-12j21.p1k vc_1 490 422 2442 2441 C 69 0.00 1366 reject_low 9 ALIGNMENT 427 YS2-12j21.p1k vc_7 391 956 13562 14124 F 566 92.40 1366 reject_low 6 ALIGNMENT 0 YS2-12j21.p1k vc_7 137 390 13562 13561 F 254 0.00 1366 reject_low 6 ALIGNMENT 0 YS2-12j21.p1k vc_2 390 137 2106 2105 C 254 0.00 1366 reject_low 2 ALIGNMENT 0 YS2-12j21.p1k vc_3 390 137 2473 2472 C 254 0.00 1366 reject_low 10 ALIGNMENT 265 YS2-12j21.p1k chr05 371 36 419997 420332 C 336 93.45 1366 accept 0 ALIGNMENT 427 YS2-12j21.p1k vc_3 956 391 1543 2105 C 566 92.40 1366 reject_low 3 ALIGNMENT 427 YS2-12j21.p1k vc_7 391 956 100 662 F 566 92.40 1366 reject_low 5 ALIGNMENT 288 YS2-12j21.p1k vc_4 391 745 5871 6226 F 355 93.80 1366 reject_low 7 ALIGNMENT 427 YS2-12j21.p1k vc_1 956 391 1543 2105 C 566 92.40 1366 reject_low 1 ALIGNMENT 0 YS2-12j21.p1k vc_1 390 137 2473 2472 C 254 0.00 1366 reject_low 9 ALIGNMENT 53 YS2-12j22.p1k chr04 136 261 1307613 1307738 F 126 81.75 1346 reject_low 22 ALIGNMENT 0 YS2-12j22.p1k chr04 275 351 1307794 1308563 F 77 0.00 1346 reject_low 19 ALIGNMENT 0 YS2-12j22.p1k chr04 262 351 1308201 1308563 F 90 0.00 1346 reject_low 14 ALIGNMENT 0 YS2-12j22.p1k chr04 275 351 1308550 1308563 F 77 0.00 1346 reject_low 5 ALIGNMENT 0 YS2-12j22.p1k chr04 266 351 1308037 1308563 F 86 0.00 1346 reject_low 9 ALIGNMENT 0 YS2-12j22.p1k chr04 233 867 1308591 1308590 F 635 0.00 1346 reject_low 21 ALIGNMENT 0 YS2-12j22.p1k chr04 135 351 1308578 1308563 F 217 0.00 1346 reject_low 20 ALIGNMENT 51 YS2-12j22.p1k chr04 36 106 1308521 1308591 F 71 91.55 1346 reject_low 23 ALIGNMENT 139 YS2-12j22.p1k chr04 52 266 1307613 1307827 F 215 89.30 1346 reject_low 17 ALIGNMENT 0 YS2-12j22.p1k chr04 107 867 1308591 1308590 F 761 0.00 1346 reject_low 23 ALIGNMENT 155 YS2-12j22.p1k chr04 29 261 1307967 1308200 F 233 90.13 1346 reject_low 14 ALIGNMENT 0 YS2-12j22.p1k chr04 267 351 1308122 1308563 F 85 0.00 1346 reject_low 12 ALIGNMENT 914 YS2-12j22.p1k chr04 36 1137 1308353 1309464 F 1102 95.37 1346 accept 0 ALIGNMENT 177 YS2-12j22.p1k chr04 36 274 1307765 1308003 F 239 92.47 1346 reject_low 1 ALIGNMENT 33 YS2-12j22.p1k chr04 218 275 1307611 1307668 F 58 86.21 1346 reject_low 24 ALIGNMENT 0 YS2-12j22.p1k chr04 177 351 1308578 1308563 F 175 0.00 1346 reject_low 18 ALIGNMENT 0 YS2-12j22.p1k chr04 262 351 1307907 1308563 F 90 0.00 1346 reject_low 8 ALIGNMENT 0 YS2-12j22.p1k chr04 454 867 1308665 1308664 F 414 0.00 1346 reject_low 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,22 ALIGNMENT 957 YS2-12j22.q1k chr04 1169 37 1313332 1314469 C 1133 95.85 1199 accept 0 ALIGNMENT 152 YS2-12j22.p1k chr04 29 261 1308051 1308284 F 233 89.70 1346 reject_low 15 ALIGNMENT 0 YS2-12j22.p1k chr04 62 93 1307613 1307612 F 32 0.00 1346 reject_low 19 ALIGNMENT 0 YS2-12j22.p1k chr04 262 351 1308159 1308563 F 90 0.00 1346 reject_low 2 ALIGNMENT 153 YS2-12j22.p1k chr04 29 266 1307883 1308121 F 238 89.50 1346 reject_low 12 ALIGNMENT 0 YS2-12j22.p1k chr04 262 351 1308327 1308563 F 90 0.00 1346 reject_low 11 ALIGNMENT 0 YS2-12j22.p1k chr04 275 351 1308004 1308563 F 77 0.00 1346 reject_low 1 ALIGNMENT 47 YS2-12j22.p1k chr04 352 453 1308564 1308665 F 102 85.29 1346 reject_low 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,22 ALIGNMENT 0 YS2-12j22.p1k chr04 276 867 1307668 1307667 F 592 0.00 1346 reject_low 24 ALIGNMENT 0 YS2-12j22.p1k chr04 238 867 1307672 1307671 F 630 0.00 1346 reject_low 25 ALIGNMENT 0 YS2-12j22.p1k chr04 62 177 1307613 1307612 F 116 0.00 1346 reject_low 25 ALIGNMENT 82 YS2-12j22.p1k chr04 94 274 1307613 1307793 F 181 82.87 1346 reject_low 19 ALIGNMENT 173 YS2-12j22.p1k chr04 36 261 1307849 1308074 F 226 93.36 1346 reject_low 4 ALIGNMENT 158 YS2-12j22.p1k chr04 29 274 1307715 1307961 F 246 89.43 1346 reject_low 3 ALIGNMENT 0 YS2-12j22.p1k chr04 275 351 1307878 1308563 F 77 0.00 1346 reject_low 16 ALIGNMENT 0 YS2-12j22.p1k chr04 262 351 1308243 1308563 F 90 0.00 1346 reject_low 10 ALIGNMENT 0 YS2-12j22.p1k chr04 262 351 1308495 1308563 F 90 0.00 1346 reject_low 7 ALIGNMENT 0 YS2-12j22.p1k chr04 62 135 1307613 1307612 F 74 0.00 1346 reject_low 22 ALIGNMENT 159 YS2-12j22.p1k chr04 29 265 1307799 1308036 F 237 90.30 1346 reject_low 9 ALIGNMENT 35 YS2-12j22.p1k chr04 178 237 1307613 1307672 F 60 86.67 1346 reject_low 25 ALIGNMENT 0 YS2-12j22.p1k chr04 267 351 1307828 1308563 F 85 0.00 1346 reject_low 17 ALIGNMENT 155 YS2-12j22.p1k chr04 29 274 1308303 1308549 F 246 89.02 1346 reject_low 5 ALIGNMENT 170 YS2-12j22.p1k chr04 36 261 1308185 1308410 F 226 92.92 1346 reject_low 6 ALIGNMENT 176 YS2-12j22.p1k chr04 36 261 1307933 1308158 F 226 93.81 1346 reject_low 2 ALIGNMENT 0 YS2-12j22.p1k chr04 262 351 1307739 1308563 F 90 0.00 1346 reject_low 22 ALIGNMENT 0 YS2-12j22.p1k chr04 262 351 1308075 1308563 F 90 0.00 1346 reject_low 4 ALIGNMENT 103 YS2-12j22.p1k chr04 36 176 1308437 1308577 F 141 92.20 1346 reject_low 18 ALIGNMENT 137 YS2-12j22.p1k chr04 29 274 1307631 1307877 F 246 86.59 1346 reject_low 16 ALIGNMENT 0 YS2-12j22.p1k chr04 267 351 1308374 1308563 F 85 0.00 1346 reject_low 13 ALIGNMENT 0 YS2-12j22.p1k chr04 62 217 1307611 1307610 F 156 0.00 1346 reject_low 24 ALIGNMENT 170 YS2-12j22.p1k chr04 36 261 1308269 1308494 F 226 92.92 1346 reject_low 7 ALIGNMENT 153 YS2-12j22.p1k chr04 29 266 1308135 1308373 F 238 89.50 1346 reject_low 13 ALIGNMENT 168 YS2-12j22.p1k chr04 41 261 1307686 1307906 F 221 93.21 1346 reject_low 8 ALIGNMENT 164 YS2-12j22.p1k chr04 36 261 1308101 1308326 F 226 92.04 1346 reject_low 11 ALIGNMENT 139 YS2-12j22.p1k chr04 29 232 1308387 1308591 F 204 90.69 1346 reject_low 21 ALIGNMENT 0 YS2-12j22.p1k chr04 275 351 1307962 1308563 F 77 0.00 1346 reject_low 3 ALIGNMENT 0 YS2-12j22.p1k chr04 262 351 1308411 1308563 F 90 0.00 1346 reject_low 6 ALIGNMENT 164 YS2-12j22.p1k chr04 36 261 1308017 1308242 F 226 92.04 1346 reject_low 10 ALIGNMENT 0 YS2-12j22.p1k chr04 262 351 1308285 1308563 F 90 0.00 1346 reject_low 15 ALIGNMENT 80 YS2-12j22.p1k chr04 29 134 1308471 1308577 F 106 93.40 1346 reject_low 20 ALIGNMENT 48 YS2-12j23.q1k chr01 1013 792 108102 108326 C 222 73.87 1268 reject_low 1 ALIGNMENT 24 YS2-12j23.p1k chr01 538 584 107781 107827 F 47 85.11 1209 reject_low 1 ALIGNMENT 966 YS2-12j23.q1k chr15 32 1131 915470 916585 F 1100 97.00 1268 accept 0 ALIGNMENT 0 YS2-12j23.p1k chr01 585 676 107828 107919 F 92 0.00 1209 reject_low 1 ALIGNMENT 982 YS2-12j23.p1k chr15 1161 32 916123 917281 C 1130 96.90 1209 accept 0 ALIGNMENT 0 YS2-12j23.q1k chr01 791 62 108327 108326 C 730 0.00 1268 reject_low 1 ALIGNMENT 66 YS2-12j23.p1k chr01 677 997 107920 108242 F 321 74.77 1209 reject_low 1 ALIGNMENT 0 YS2-12j23.p1k chr01 62 537 107781 107780 F 476 0.00 1209 reject_low 1 ALIGNMENT 983 YS2-12j24.q1k chr07 1194 27 914384 915573 C 1168 95.89 1284 accept 0 ALIGNMENT 1018 YS2-12j24.p1k chr07 30 1229 910346 911554 F 1200 96.33 1229 accept 0 ALIGNMENT 834 YS2-12k03.p1k chr07 66 1153 314581 315661 F 1088 94.03 1389 accept 0 ALIGNMENT 940 YS2-12k03.q1k chr07 1191 39 317785 318950 C 1153 95.58 1323 accept 0 ALIGNMENT 932 YS2-12k04.p1k chr07 22 1060 314581 315631 F 1039 97.79 1306 accept 0 ALIGNMENT 891 YS2-12k04.q1k chr07 1068 26 317899 318955 C 1043 96.93 1318 accept 0 ALIGNMENT 39 YS2-12k08.q1k vc_5 345 307 5025 5063 C 39 100.00 345 reject_low 6 ALIGNMENT 0 YS2-12k08.q1k vc_3 295 62 2521 2520 C 234 0.00 345 reject_low 4 ALIGNMENT 44 YS2-12k08.q1k vc_4 296 345 5823 5871 F 50 98.00 345 reject_low 5 ALIGNMENT 44 YS2-12k08.q1k vc_1 345 296 2472 2520 C 50 98.00 345 reject_low 2 ALIGNMENT 0 YS2-12k08.q1k vc_5 306 62 37 36 C 245 0.00 345 reject_low 8 ALIGNMENT 44 YS2-12k08.q1k vc_3 345 296 2472 2520 C 50 98.00 345 reject_low 4 ALIGNMENT 36 YS2-12k08.q1k vc_5 342 307 1 36 C 36 100.00 345 reject_low 8 ALIGNMENT 0 YS2-12k08.q1k vc_5 306 62 5064 5063 C 245 0.00 345 reject_low 6 ALIGNMENT 0 YS2-12k08.q1k chr05 345 305 454191 454190 C 41 0.00 345 accept_chi 0 ALIGNMENT 0 YS2-12k08.q1k vc_7 62 307 13525 13524 F 246 0.00 345 reject_low 7 ALIGNMENT 258 YS2-12k08.q1k chr05 304 40 454190 454455 C 265 99.62 345 accept_chi 0 ALIGNMENT 38 YS2-12k08.q1k vc_7 308 345 13525 13562 F 38 100.00 345 reject_low 7 ALIGNMENT 242 YS2-12k08.p1k chr05 25 288 454190 454455 F 264 97.73 307 accept_chi 1 ALIGNMENT 0 YS2-12k08.q1k vc_4 62 295 5823 5822 F 234 0.00 345 reject_low 5 ALIGNMENT 0 YS2-12k08.q1k vc_2 295 62 2154 2153 C 234 0.00 345 reject_low 3 ALIGNMENT 0 YS2-12k08.q1k vc_1 295 62 2521 2520 C 234 0.00 345 reject_low 2 ALIGNMENT 0 YS2-12k08.p1k chr05 289 307 454455 454454 F 19 0.00 307 accept_chi 1 ALIGNMENT 44 YS2-12k08.q1k vc_2 345 296 2105 2153 C 50 98.00 345 reject_low 3 ALIGNMENT 0 YS2-12k09.p1k chr15 379 62 1060995 1060994 C 318 0.00 1320 reject_low 2 ALIGNMENT 0 YS2-12k09.p1k chr04 319 62 1503936 1503935 C 258 0.00 1320 reject_low 3 ALIGNMENT 0 YS2-12k09.p1k chr04 317 62 1504010 1504009 C 256 0.00 1320 reject_low 4 ALIGNMENT 36 YS2-12k09.p1k chr04 366 320 1503889 1503935 C 47 93.62 1320 reject_low 3 ALIGNMENT 0 YS2-12k09.p1k chr04 317 62 1503920 1503919 C 256 0.00 1320 reject_low 5 ALIGNMENT 1025 YS2-12k09.p1k chr15 1190 31 1059930 1061091 C 1160 96.38 1320 accept 0 ALIGNMENT 34 YS2-12k09.p1k chr04 360 318 1503877 1503919 C 43 95.35 1320 reject_low 5 ALIGNMENT 35 YS2-12k09.p1k chr04 366 318 1503961 1504009 C 49 91.84 1320 reject_low 4 ALIGNMENT 0 YS2-12k09.p1k chr15 127 62 1060743 1060742 C 66 0.00 1320 reject_low 1 ALIGNMENT 971 YS2-12k09.q1k chr15 39 1165 1059208 1060351 F 1127 96.01 1318 accept 0 ALIGNMENT 0 YS2-12k09.p1k chr04 881 367 1503890 1503889 C 515 0.00 1320 reject_low 3 ALIGNMENT 73 YS2-12k09.p1k chr15 218 128 1060652 1060742 C 91 93.41 1320 reject_low 1 ALIGNMENT 0 YS2-12k09.p1k chr04 881 361 1503878 1503877 C 521 0.00 1320 reject_low 5 ALIGNMENT 73 YS2-12k09.p1k chr15 470 380 1060904 1060994 C 91 93.41 1320 reject_low 2 ALIGNMENT 0 YS2-12k09.p1k chr15 881 219 1060653 1060652 C 663 0.00 1320 reject_low 1 ALIGNMENT 0 YS2-12k09.p1k chr15 881 471 1060905 1060904 C 411 0.00 1320 reject_low 2 ALIGNMENT 0 YS2-12k09.p1k chr04 881 367 1503962 1503961 C 515 0.00 1320 reject_low 4 ALIGNMENT 1005 YS2-12k10.p1k chr04 35 1139 1000037 1001152 F 1105 97.92 1344 accept 0 ALIGNMENT 1000 YS2-12k10.q1k chr04 1216 38 1005012 1006209 C 1179 95.76 1412 accept 0 ALIGNMENT 1014 YS2-12k12.p1k chr04 1254 32 839283 840520 C 1223 95.18 1365 accept 0 ALIGNMENT 1066 YS2-12k12.q1k chr04 38 1276 836542 837794 F 1239 95.80 1440 accept 0 ALIGNMENT 981 YS2-12k13.p1k chr02 1157 29 585093 586231 C 1129 96.55 1282 accept 0 ALIGNMENT 1038 YS2-12k13.q1k chr02 40 1229 584080 585278 F 1190 96.72 1385 accept 0 ALIGNMENT 918 YS2-12k16.q1k chr12 38 1104 494837 495916 F 1067 96.06 1337 accept 0 ALIGNMENT 803 YS2-12k16.p1k chr12 1017 30 499091 500080 C 988 95.34 1274 accept 0 ALIGNMENT 1033 YS2-12k17.p1k chr12 27 1197 462445 463611 F 1171 96.50 1328 accept 1 ALIGNMENT 961 YS2-12k17.q1k chr12 1124 29 456978 458089 C 1096 96.35 1308 accept 0 ALIGNMENT 1033 YS2-12k17.p1k chr12 27 1197 453308 454474 F 1171 96.50 1328 accept 0 ALIGNMENT 961 YS2-12k17.q1k chr12 1124 29 466115 467226 C 1096 96.35 1308 accept 1 ALIGNMENT 0 YS2-12k19.q1k vc_4 789 62 1535 1534 C 728 0.00 1322 reject_low 17 ALIGNMENT 0 YS2-12k19.q1k vc_7 62 752 63 62 F 691 0.00 1322 reject_low 22 ALIGNMENT 0 YS2-12k19.q1k vc_2 881 791 2106 2105 C 91 0.00 1322 reject_low 19 ALIGNMENT 0 YS2-12k19.q1k vc_7 791 881 13562 13561 F 91 0.00 1322 reject_low 23 ALIGNMENT 0 YS2-12k19.p1k vc_3 765 62 2473 2472 C 704 0.00 1259 reject_low 25 ALIGNMENT 279 YS2-12k19.p1k vc_4 766 1115 5871 6226 F 350 93.43 1259 reject_low 8 ALIGNMENT 308 YS2-12k19.q1k vc_2 790 1167 2164 2545 F 378 94.71 1322 reject_low 11 ALIGNMENT 0 YS2-12k19.q1k vc_4 62 789 126 125 F 728 0.00 1322 reject_low 13 ALIGNMENT 308 YS2-12k19.q1k vc_3 790 1167 2531 2912 F 378 94.71 1322 reject_low 12 ALIGNMENT 39 YS2-12k19.q1k vc_5 790 752 5025 5063 C 39 100.00 1322 reject_low 21 ALIGNMENT 36 YS2-12k19.q1k vc_5 787 752 1 36 C 36 100.00 1322 reject_low 26 ALIGNMENT 0 YS2-12k19.q1k vc_5 881 788 2 1 C 94 0.00 1322 reject_low 26 ALIGNMENT 146 YS2-12k19.q1k vc_4 790 950 6353 6514 F 161 98.14 1322|1,0 reject_low 15 ALIGNMENT 0 YS2-12k19.q1k vc_5 751 62 5064 5063 C 690 0.00 1322 reject_low 21 ALIGNMENT 41 YS2-12k19.q1k vc_1 790 750 2472 2512 C 41 100.00 1322 reject_low 18 ALIGNMENT 38 YS2-12k19.q1k vc_7 753 790 13525 13562 F 38 100.00 1322 reject_low 23 ALIGNMENT 0 YS2-12k19.q1k vc_7 789 62 2728 2727 C 728 0.00 1322 reject_low 3 ALIGNMENT 0 YS2-12k19.q1k vc_4 62 749 5831 5830 F 688 0.00 1322 reject_low 15 ALIGNMENT 309 YS2-12k19.q1k vc_4 1302 790 5289 5812 C 513 88.11 1322 reject_low 9 ALIGNMENT 0 YS2-12k19.q1k vc_3 749 62 2513 2512 C 688 0.00 1322 reject_low 20 ALIGNMENT 0 YS2-12k19.q1k vc_2 749 62 2146 2145 C 688 0.00 1322 reject_low 19 ALIGNMENT 41 YS2-12k19.q1k vc_2 790 750 2105 2145 C 41 100.00 1322 reject_low 19 ALIGNMENT 298 YS2-12k19.p1k vc_7 766 1171 13562 13977 F 406 91.63 1259 reject_low 7 ALIGNMENT 0 YS2-12k19.p1k vc_6 62 992 3585 3584 F 931 0.00 1259 reject_low 14 ALIGNMENT 0 YS2-12k19.p1k vc_1 765 62 2106 2105 C 704 0.00 1259 reject_low 4 ALIGNMENT 298 YS2-12k19.p1k vc_5 1171 766 4610 5025 C 406 91.63 1259 reject_low 2 ALIGNMENT 0 YS2-12k19.q1k vc_3 881 791 2473 2472 C 91 0.00 1322 reject_low 20 ALIGNMENT 87 YS2-12k19.q1k vc_4 878 790 1446 1534 C 89 100.00 1322 reject_low 17 ALIGNMENT 28 YS2-12k19.p1k vc_3 799 766 2438 2472 C 34 94.12 1259 reject_low 25 ALIGNMENT 0 YS2-12k19.q1k vc_4 789 62 5813 5812 C 728 0.00 1322 reject_low 9 ALIGNMENT 316 YS2-12k19.q1k vc_5 790 1302 2398 2919 F 513 88.11 1322 reject_low 2 ALIGNMENT 0 YS2-12k19.p1k vc_7 62 765 100 99 F 704 0.00 1259 reject_low 3 ALIGNMENT 0 YS2-12k19.q1k vc_5 62 789 2398 2397 F 728 0.00 1322 reject_low 2 ALIGNMENT 0 YS2-12k19.q1k vc_5 881 791 5026 5025 C 91 0.00 1322 reject_low 21 ALIGNMENT 0 YS2-12k19.p1k chr04 922 748 144730 144729 C 175 0.00 1259 accept_chi 1 ALIGNMENT 0 YS2-12k19.q1k vc_1 749 62 2513 2512 C 688 0.00 1322 reject_low 18 ALIGNMENT 0 YS2-12k19.p1k vc_7 62 765 13562 13561 F 704 0.00 1259 reject_low 7 ALIGNMENT 698 YS2-12k19.q1k chr04 29 749 144729 145450 F 721 99.58 1322 accept_chi 0 ALIGNMENT 0 YS2-12k19.q1k vc_7 791 881 100 99 F 91 0.00 1322 reject_low 22 ALIGNMENT 42 YS2-12k19.q1k vc_7 1000 949 6360 6411 C 52 96.15 1322|1,0 reject_low 16 ALIGNMENT 298 YS2-12k19.p1k vc_3 1171 766 1690 2105 C 406 91.63 1259 reject_low 6 ALIGNMENT 38 YS2-12k19.q1k vc_7 753 790 63 100 F 38 100.00 1322 reject_low 22 ALIGNMENT 0 YS2-12k19.p1k vc_2 765 62 2106 2105 C 704 0.00 1259 reject_low 5 ALIGNMENT 0 YS2-12k19.p1k vc_1 922 800 2439 2438 C 123 0.00 1259 reject_low 24 ALIGNMENT 41 YS2-12k19.q1k vc_3 790 750 2472 2512 C 41 100.00 1322 reject_low 20 ALIGNMENT 0 YS2-12k19.q1k vc_4 791 790 5872 6353 F 0 0.00 1322 reject_low 15 ALIGNMENT 0 YS2-12k19.q1k vc_1 62 789 2531 2530 F 728 0.00 1322 reject_low 10 ALIGNMENT 0 YS2-12k19.p1k vc_1 765 62 2473 2472 C 704 0.00 1259 reject_low 24 ALIGNMENT 0 YS2-12k19.p1k vc_3 922 800 2439 2438 C 123 0.00 1259 reject_low 25 ALIGNMENT 146 YS2-12k19.q1k vc_4 790 950 126 287 F 161 98.14 1322 reject_low 13 ALIGNMENT 0 YS2-12k19.q1k vc_5 751 62 37 36 C 690 0.00 1322 reject_low 26 ALIGNMENT 0 YS2-12k19.q1k vc_7 62 752 13525 13524 F 691 0.00 1322 reject_low 23 ALIGNMENT 308 YS2-12k19.q1k vc_1 790 1167 2531 2912 F 378 94.71 1322 reject_low 10 ALIGNMENT 298 YS2-12k19.p1k vc_1 1171 766 1690 2105 C 406 91.63 1259 reject_low 4 ALIGNMENT 298 YS2-12k19.p1k vc_7 766 1171 100 515 F 406 91.63 1259 reject_low 3 ALIGNMENT 0 YS2-12k19.q1k chr04 750 881 145450 145449 F 132 0.00 1322 accept_chi 0 ALIGNMENT 0 YS2-12k19.p1k vc_5 765 62 5026 5025 C 704 0.00 1259 reject_low 2 ALIGNMENT 0 YS2-12k19.q1k vc_1 881 791 2473 2472 C 91 0.00 1322 reject_low 18 ALIGNMENT 28 YS2-12k19.p1k vc_1 799 766 2438 2472 C 34 94.12 1259 reject_low 24 ALIGNMENT 0 YS2-12k19.p1k vc_3 765 62 2106 2105 C 704 0.00 1259 reject_low 6 ALIGNMENT 693 YS2-12k19.p1k chr04 747 28 144729 145450 C 720 99.44 1259 accept_chi 1 ALIGNMENT 0 YS2-12k19.q1k vc_3 62 789 2531 2530 F 728 0.00 1322 reject_low 12 ALIGNMENT 298 YS2-12k19.p1k vc_2 1171 766 1690 2105 C 406 91.63 1259 reject_low 5 ALIGNMENT 41 YS2-12k19.q1k vc_4 750 790 5831 5871 F 41 100.00 1322 reject_low 15 ALIGNMENT 0 YS2-12k19.q1k vc_2 62 789 2164 2163 F 728 0.00 1322 reject_low 11 ALIGNMENT 0 YS2-12k19.p1k vc_4 62 765 5871 5870 F 704 0.00 1259 reject_low 8 ALIGNMENT 120 YS2-12k19.q1k vc_7 1167 999 5001 5172 C 169 91.12 1322|0,1 reject_low 16 ALIGNMENT 0 YS2-12k19.q1k vc_7 999 1000 5172 6360 C 0 0.00 1322 reject_low 16 ALIGNMENT 83 YS2-12k19.p1k vc_6 993 1171 3585 3771 F 179 83.80 1259 reject_low 14 ALIGNMENT 0 YS2-12k19.q1k vc_7 948 62 6412 6411 C 887 0.00 1322 reject_low 16 ALIGNMENT 316 YS2-12k19.q1k vc_7 1302 790 2206 2727 C 513 88.50 1322 reject_low 3 ALIGNMENT 884 YS2-12k20.p1k chr07 38 1127 301772 302875 F 1090 95.41 1306 accept 0 ALIGNMENT 995 YS2-12k20.q1k chr07 1138 40 305934 307041 C 1099 97.36 1341 accept 0 ALIGNMENT 948 YS2-12k21.p1k chr16 31 1138 237812 238933 F 1108 96.21 1188 accept 0 ALIGNMENT 981 YS2-12k21.q1k chr16 1214 41 240697 241882 C 1174 96.00 1291 accept 0 ALIGNMENT 1055 YS2-12k23.q1k chr04 1225 30 496864 498065 C 1196 96.99 1270 accept 0 ALIGNMENT 956 YS2-12k23.p1k chr04 63 1161 495661 496759 F 1099 96.91 1253 accept 0 ALIGNMENT 1020 YS2-12k24.p1k chr04 25 1218 495661 496855 F 1194 96.23 1254 accept 0 ALIGNMENT 961 YS2-12k24.q1k chr04 1101 30 496984 498069 C 1072 97.85 1300 accept 0 ALIGNMENT 1001 YS2-12l01.p1k chr16 1241 35 406956 408176 C 1207 95.44 1290 accept 0 ALIGNMENT 1017 YS2-12l01.q1k chr16 46 1259 402990 404211 F 1214 95.55 1397 accept 0 ALIGNMENT 312 YS2-12l01.p1k chr02 1148 667 606656 607141 C 482 88.59 1290 reject_low 1 ALIGNMENT 0 YS2-12l01.p1k chr02 666 62 607142 607141 C 605 0.00 1290 reject_low 1 ALIGNMENT 1066 YS2-12l02.q1k chr12 1274 42 465568 466813 C 1233 96.27 1384 reject_low 1 ALIGNMENT 1001 YS2-12l02.p1k chr12 31 1235 464555 465763 F 1205 95.19 1307 reject_low 1 ALIGNMENT 1066 YS2-12l02.q1k chr12 1274 42 456431 457676 C 1233 96.27 1384 accept 0 ALIGNMENT 1004 YS2-12l02.p1k chr12 31 1286 455418 456681 F 1256 94.27 1307 accept 0 ALIGNMENT 107 YS2-12l03.p1k chr07 389 139 915565 915791 C 251 87.65 1462 accept 0 ALIGNMENT 918 YS2-12l03.q1k chr07 30 1166 909742 910900 F 1137 94.81 1378 accept 0 ALIGNMENT 924 YS2-12l05.q1k chr12 40 1077 17636 18679 F 1038 96.82 1310 accept 0 ALIGNMENT 804 YS2-12l05.p1k chr12 1077 47 21337 22369 C 1031 94.08 1351 accept 0 ALIGNMENT 989 YS2-12l06.p1k chr15 38 1180 446379 447534 F 1143 96.50 1358 accept 0 ALIGNMENT 0 YS2-12l06.q1k chr04 905 719 477109 477108 C 187 0.00 1368 reject_low 1 ALIGNMENT 978 YS2-12l06.q1k chr15 1194 41 450880 452047 C 1154 96.27 1368 accept 0 ALIGNMENT 0 YS2-12l06.q1k chr04 590 62 477233 477232 C 529 0.00 1368 reject_low 1 ALIGNMENT 89 YS2-12l06.q1k chr04 718 591 477108 477232 C 128 92.97 1368 reject_low 1 ALIGNMENT 41 YS2-12l07.q1k vc_1 353 313 2472 2512 C 41 100.00 353 reject_low 2 ALIGNMENT 0 YS2-12l07.p1k chr13 313 329 466805 466804 F 17 0.00 329 accept_chi 1 ALIGNMENT 269 YS2-12l07.q1k chr13 312 28 466520 466805 C 285 99.65 353 accept_chi 0 ALIGNMENT 36 YS2-12l07.q1k vc_5 350 315 1 36 C 36 100.00 353 reject_low 7 ALIGNMENT 0 YS2-12l07.q1k vc_5 314 62 5064 5063 C 253 0.00 353 reject_low 5 ALIGNMENT 41 YS2-12l07.q1k vc_3 353 313 2472 2512 C 41 100.00 353 reject_low 3 ALIGNMENT 0 YS2-12l07.q1k vc_7 62 315 13525 13524 F 254 0.00 353 reject_low 6 ALIGNMENT 268 YS2-12l07.p1k chr13 31 312 466524 466805 F 282 99.65 329 accept_chi 1 ALIGNMENT 39 YS2-12l07.q1k vc_5 353 315 5025 5063 C 39 100.00 353 reject_low 5 ALIGNMENT 0 YS2-12l07.q1k chr13 353 313 466521 466520 C 41 0.00 353 accept_chi 0 ALIGNMENT 0 YS2-12l07.q1k vc_4 62 312 5831 5830 F 251 0.00 353 reject_low 4 ALIGNMENT 0 YS2-12l07.q1k vc_3 312 62 2513 2512 C 251 0.00 353 reject_low 3 ALIGNMENT 38 YS2-12l07.q1k vc_7 316 353 13525 13562 F 38 100.00 353 reject_low 6 ALIGNMENT 0 YS2-12l07.q1k vc_5 314 62 37 36 C 253 0.00 353 reject_low 7 ALIGNMENT 0 YS2-12l07.q1k vc_1 312 62 2513 2512 C 251 0.00 353 reject_low 2 ALIGNMENT 41 YS2-12l07.q1k vc_4 313 353 5831 5871 F 41 100.00 353 reject_low 4 ALIGNMENT 929 YS2-12l08.q1k chr14 33 1093 84543 85619 F 1061 96.80 1366 accept 0 ALIGNMENT 432 YS2-12l08.p1k chr14 809 42 88686 89423 C 768 89.71 1511 accept 0 ALIGNMENT 915 YS2-12l10.p1k chr14 37 1163 14599 15735 F 1127 94.50 1344 reject_low 3 ALIGNMENT 89 YS2-12l10.q1k chr10 36 196 728011 728171 F 161 85.71 1384 reject_low 2 ALIGNMENT 655 YS2-12l10.q1k chr06 1219 36 13286 14477 C 1184 86.40 1384 reject_low 1 ALIGNMENT 0 YS2-12l10.q1k chr14 484 62 15931 15930 C 423 0.00 1384 reject_low 3 ALIGNMENT 918 YS2-12l10.p1k chr06 37 1163 12696 13832 F 1127 94.59 1344 reject_low 1 ALIGNMENT 0 YS2-12l10.q1k chr10 197 484 728172 728412 F 288 0.00 1384 reject_low 2 ALIGNMENT 508 YS2-12l10.q1k chr10 485 1219 728413 729154 F 735 90.61 1384 reject_low 2 ALIGNMENT 493 YS2-12l10.q1k chr14 1219 485 15189 15930 C 735 89.93 1384 reject_low 3 ALIGNMENT 918 YS2-12l10.p1k chr04 37 1171 15970 17117 F 1135 94.45 1344 accept_tel 0 ALIGNMENT 944 YS2-12l10.p1k chr10 1163 37 728608 729745 C 1127 95.47 1344 reject_low 2 ALIGNMENT 690 YS2-12l10.q1k chr04 1193 36 16590 17749 C 1158 87.65 1384 accept_tel 0 ALIGNMENT 980 YS2-12l12.p1k chr15 1111 31 787038 788131 C 1081 97.69 1318 accept 0 ALIGNMENT 948 YS2-12l12.q1k chr15 38 1085 783606 784665 F 1048 98.38 1347 accept 0 ALIGNMENT 0 YS2-12l15.q1k vc_7 62 277 13525 13524 F 216 0.00 315 reject_low 6 ALIGNMENT 231 YS2-12l15.q1k chr04 274 29 1483565 1483810 C 246 100.00 315 accept_chi 0 ALIGNMENT 41 YS2-12l15.q1k vc_1 315 275 2472 2512 C 41 100.00 315 reject_low 2 ALIGNMENT 0 YS2-12l15.q1k vc_5 276 62 5064 5063 C 215 0.00 315 reject_low 5 ALIGNMENT 0 YS2-12l15.q1k vc_5 276 62 37 36 C 215 0.00 315 reject_low 7 ALIGNMENT 0 YS2-12l15.p1k chr04 282 298 1483810 1483809 F 17 0.00 298 accept_chi 1 ALIGNMENT 41 YS2-12l15.q1k vc_4 275 315 5831 5871 F 41 100.00 315 reject_low 4 ALIGNMENT 0 YS2-12l15.q1k chr04 315 275 1483566 1483565 C 41 0.00 315 accept_chi 0 ALIGNMENT 38 YS2-12l15.q1k vc_7 278 315 13525 13562 F 38 100.00 315 reject_low 6 ALIGNMENT 41 YS2-12l15.q1k vc_3 315 275 2472 2512 C 41 100.00 315 reject_low 3 ALIGNMENT 0 YS2-12l15.q1k vc_4 62 274 5831 5830 F 213 0.00 315 reject_low 4 ALIGNMENT 0 YS2-12l15.q1k vc_1 274 62 2513 2512 C 213 0.00 315 reject_low 2 ALIGNMENT 36 YS2-12l15.q1k vc_5 312 277 1 36 C 36 100.00 315 reject_low 7 ALIGNMENT 39 YS2-12l15.q1k vc_5 315 277 5025 5063 C 39 100.00 315 reject_low 5 ALIGNMENT 0 YS2-12l15.q1k vc_3 274 62 2513 2512 C 213 0.00 315 reject_low 3 ALIGNMENT 228 YS2-12l15.p1k chr04 36 281 1483565 1483810 F 246 99.59 298 accept_chi 1 ALIGNMENT 24 YS2-12l16.p1k chr06 649 678 2944 2973 F 30 93.33 1388 reject_low 14 ALIGNMENT 0 YS2-12l16.p1k chr06 52 518 2873 2868 F 467 0.00 1388 reject_low 14 ALIGNMENT 40 YS2-12l16.p1k chr02 741 798 4154 4210 F 58 91.38 1388 reject_low 13 ALIGNMENT 29 YS2-12l16.p1k chr16 628 596 944267 944299 C 33 96.97 1388 reject_low 18 ALIGNMENT 816 YS2-12l16.p1k chr09 29 1134 3984 5083 F 1106 92.86 1388 reject_low 7 ALIGNMENT 820 YS2-12l16.p1k chr14 29 1134 3596 4694 F 1106 92.86 1388 ambiguous_tel 2 ALIGNMENT 0 YS2-12l16.p1k chr13 629 648 3787 3782 F 20 0.00 1388 reject_low 16 ALIGNMENT 820 YS2-12l16.p1k chr15 1134 29 1086533 1087631 C 1106 92.59 1388 reject_low 6 ALIGNMENT 24 YS2-12l16.p1k chr16 678 649 944241 944270 C 30 93.33 1388 reject_low 18 ALIGNMENT 29 YS2-12l16.p1k chr02 596 628 4079 4111 F 33 96.97 1388 reject_low 13 ALIGNMENT 0 YS2-12l16.p1k chr06 629 648 2948 2943 F 20 0.00 1388 reject_low 14 ALIGNMENT 40 YS2-12l16.p1k chr08 798 741 558621 558677 C 58 91.38 1388 reject_low 17 ALIGNMENT 24 YS2-12l16.p1k chr08 678 649 558694 558723 C 30 93.33 1388 reject_low 17 ALIGNMENT 40 YS2-12l16.p1k chr12 741 798 9488 9544 F 58 91.38 1388 reject_low 15 ALIGNMENT 20 YS2-12l16.p1k chr16 51 29 944342 944364 C 23 95.65 1388 reject_low 18 ALIGNMENT 0 YS2-12l16.q1k chr05 1115 1138 571464 571472 F 24 0.00 1395 ambiguous_tel 4 ALIGNMENT 40 YS2-12l16.q1k chr05 1139 1205 571473 571545 F 67 89.55 1395 ambiguous_tel 4 ALIGNMENT 29 YS2-12l16.p1k chr12 596 628 9413 9445 F 33 96.97 1388 reject_low 15 ALIGNMENT 820 YS2-12l16.p1k chr12 1134 29 1073569 1074667 C 1106 92.59 1388 ambiguous_tel 0 ALIGNMENT 581 YS2-12l16.q1k chr16 290 1205 942804 943780 F 916 88.76 1395 reject_low 18 ALIGNMENT 820 YS2-12l16.p1k chr05 1134 29 572197 573295 C 1106 92.59 1388 ambiguous_tel 4 ALIGNMENT 775 YS2-12l16.q1k chr12 1205 30 9931 11162 C 1176 89.71 1395 reject_low 15 ALIGNMENT 0 YS2-12l16.q1k chr05 176 62 6339 6338 C 115 0.00 1395 reject_low 9 ALIGNMENT 24 YS2-12l16.p1k chr12 649 678 9442 9471 F 30 93.33 1388 reject_low 15 ALIGNMENT 702 YS2-12l16.p1k chr05 29 925 3660 4561 F 897 93.87 1388 reject_low 9 ALIGNMENT 0 YS2-12l16.p1k chr16 518 52 944346 944341 C 467 0.00 1388 reject_low 18 ALIGNMENT 20 YS2-12l16.p1k chr08 51 29 558795 558817 C 23 95.65 1388 reject_low 17 ALIGNMENT 820 YS2-12l16.p1k chr16 29 1134 3505 4603 F 1106 92.86 1388 ambiguous_tel 3 ALIGNMENT 50 YS2-12l16.p1k chr16 574 519 944290 944345 C 56 96.43 1388 reject_low 18 ALIGNMENT 820 YS2-12l16.p1k chr07 1134 29 1086274 1087372 C 1106 92.59 1388 ambiguous_tel 1 ALIGNMENT 0 YS2-12l16.p1k chr08 629 648 3643 3638 F 20 0.00 1388 reject_low 19 ALIGNMENT 760 YS2-12l16.p1k chr12 925 29 1067122 1068004 C 897 95.88 1388 reject_low 10 ALIGNMENT 0 YS2-12l16.p1k chr13 52 518 3712 3707 F 467 0.00 1388 reject_low 16 ALIGNMENT 0 YS2-12l16.p1k chr02 679 740 4138 4153 F 62 0.00 1388 reject_low 13 ALIGNMENT 0 YS2-12l16.q1k chr16 62 289 942804 942803 F 228 0.00 1395 reject_low 18 ALIGNMENT 24 YS2-12l16.p1k chr02 649 678 4108 4137 F 30 93.33 1388 reject_low 13 ALIGNMENT 816 YS2-12l16.p1k chr10 29 1134 3967 5066 F 1106 92.86 1388 reject_low 8 ALIGNMENT 774 YS2-12l16.q1k chr12 30 1205 1071685 1072917 F 1176 89.63 1395 reject_low 12 ALIGNMENT 488 YS2-12l16.q1k chr08 1205 411 4128 4951 C 795 88.30 1395 reject_low 19 ALIGNMENT 0 YS2-12l16.q1k chr08 410 301 4952 4971 C 110 0.00 1395 reject_low 19 ALIGNMENT 794 YS2-12l16.q1k chr06 1205 30 3434 4650 C 1176 90.14 1395 reject_low 14 ALIGNMENT 0 YS2-12l16.q1k chr08 275 62 4997 4996 C 214 0.00 1395 reject_low 19 ALIGNMENT 839 YS2-12l16.q1k chr16 1205 30 5255 6492 C 1176 91.24 1395 ambiguous_tel 3 ALIGNMENT 0 YS2-12l16.p1k chr08 518 52 558799 558794 C 467 0.00 1388 reject_low 17 ALIGNMENT 0 YS2-12l16.p1k chr08 740 679 558678 558693 C 62 0.00 1388 reject_low 17 ALIGNMENT 0 YS2-12l16.p1k chr08 648 629 558724 558719 C 20 0.00 1388 reject_low 17 ALIGNMENT 20 YS2-12l16.p1k chr13 29 51 3689 3711 F 23 95.65 1388 reject_low 16 ALIGNMENT 50 YS2-12l16.p1k chr08 519 574 3564 3619 F 56 96.43 1388 reject_low 19 ALIGNMENT 793 YS2-12l16.q1k chr05 30 1114 570358 571463 F 1085 91.89 1395 ambiguous_tel 4 ALIGNMENT 29 YS2-12l16.p1k chr08 596 628 3610 3642 F 33 96.97 1388 reject_low 19 ALIGNMENT 29 YS2-12l16.p1k chr13 596 628 3754 3786 F 33 96.97 1388 reject_low 16 ALIGNMENT 40 YS2-12l16.p1k chr06 741 798 2990 3046 F 58 91.38 1388 reject_low 14 ALIGNMENT 774 YS2-12l16.q1k chr04 30 1205 1525484 1526716 F 1176 89.63 1395 reject_low 5 ALIGNMENT 40 YS2-12l16.q1k chr05 1205 1139 5318 5390 C 67 89.55 1395 reject_low 9 ALIGNMENT 20 YS2-12l16.p1k chr12 29 51 9348 9370 F 23 95.65 1388 reject_low 15 ALIGNMENT 752 YS2-12l16.q1k chr09 1205 44 5735 6948 C 1162 89.41 1395 reject_low 7 ALIGNMENT 0 YS2-12l16.p1k chr16 740 679 944225 944240 C 62 0.00 1388 reject_low 18 ALIGNMENT 775 YS2-12l16.q1k chr13 1205 30 4272 5503 C 1176 89.71 1395 reject_low 16 ALIGNMENT 50 YS2-12l16.p1k chr08 574 519 558743 558798 C 56 96.43 1388 reject_low 17 ALIGNMENT 0 YS2-12l16.q1k chr05 1138 1115 5391 5399 C 24 0.00 1395 reject_low 9 ALIGNMENT 0 YS2-12l16.p1k chr08 595 575 558753 558742 C 21 0.00 1388 reject_low 17 ALIGNMENT 0 YS2-12l16.p1k chr06 575 595 2925 2914 F 21 0.00 1388 reject_low 14 ALIGNMENT 0 YS2-12l16.p1k chr02 575 595 4089 4078 F 21 0.00 1388 reject_low 13 ALIGNMENT 0 YS2-12l16.p1k chr06 679 740 2974 2989 F 62 0.00 1388 reject_low 14 ALIGNMENT 0 YS2-12l16.p1k chr08 575 595 3620 3609 F 21 0.00 1388 reject_low 19 ALIGNMENT 29 YS2-12l16.p1k chr08 628 596 558720 558752 C 33 96.97 1388 reject_low 17 ALIGNMENT 24 YS2-12l16.p1k chr13 649 678 3783 3812 F 30 93.33 1388 reject_low 16 ALIGNMENT 839 YS2-12l16.q1k chr07 30 1205 1084385 1085622 F 1176 91.24 1395 ambiguous_tel 1 ALIGNMENT 24 YS2-12l16.p1k chr08 649 678 3639 3668 F 30 93.33 1388 reject_low 19 ALIGNMENT 47 YS2-12l16.p1k chr13 519 574 3708 3763 F 56 94.64 1388 reject_low 16 ALIGNMENT 0 YS2-12l16.p1k chr12 575 595 9423 9412 F 21 0.00 1388 reject_low 15 ALIGNMENT 50 YS2-12l16.p1k chr06 519 574 2869 2924 F 56 96.43 1388 reject_low 14 ALIGNMENT 839 YS2-12l16.q1k chr14 1205 30 5346 6583 C 1176 91.24 1395 ambiguous_tel 2 ALIGNMENT 0 YS2-12l16.p1k chr12 679 740 9472 9487 F 62 0.00 1388 reject_low 15 ALIGNMENT 902 YS2-12l16.q1k chr02 1205 30 4597 5812 C 1176 93.03 1395 reject_low 13 ALIGNMENT 786 YS2-12l16.q1k chr05 1114 177 5400 6338 C 938 94.99 1395 reject_low 9 ALIGNMENT 0 YS2-12l16.p1k chr02 52 518 4037 4032 F 467 0.00 1388 reject_low 13 ALIGNMENT 924 YS2-12l16.q1k chr12 30 1205 1065187 1066365 F 1176 93.71 1395 ambiguous_tel 0 ALIGNMENT 22 YS2-12l16.q1k chr08 300 276 4972 4996 C 25 96.00 1395 reject_low 19 ALIGNMENT 0 YS2-12l16.p1k chr08 679 740 3669 3684 F 62 0.00 1388 reject_low 19 ALIGNMENT 752 YS2-12l16.q1k chr10 1205 44 5718 6931 C 1162 89.41 1395 reject_low 8 ALIGNMENT 0 YS2-12l16.p1k chr16 648 629 944271 944266 C 20 0.00 1388 reject_low 18 ALIGNMENT 775 YS2-12l16.q1k chr12 1205 30 4396 5627 C 1176 89.71 1395 reject_low 11 ALIGNMENT 0 YS2-12l16.p1k chr13 679 740 3813 3828 F 62 0.00 1388 reject_low 16 ALIGNMENT 40 YS2-12l16.p1k chr16 798 741 944168 944224 C 58 91.38 1388 reject_low 18 ALIGNMENT 0 YS2-12l16.p1k chr08 52 518 3568 3563 F 467 0.00 1388 reject_low 19 ALIGNMENT 896 YS2-12l16.q1k chr08 30 1205 557020 558234 F 1176 92.94 1395 reject_low 17 ALIGNMENT 40 YS2-12l16.p1k chr13 741 798 3829 3885 F 58 91.38 1388 reject_low 16 ALIGNMENT 50 YS2-12l16.p1k chr02 519 574 4033 4088 F 56 96.43 1388 reject_low 13 ALIGNMENT 50 YS2-12l16.p1k chr12 519 574 9367 9422 F 56 96.43 1388 reject_low 15 ALIGNMENT 774 YS2-12l16.q1k chr15 30 1205 1084649 1085881 F 1176 89.63 1395 reject_low 6 ALIGNMENT 0 YS2-12l16.p1k chr13 575 595 3764 3753 F 21 0.00 1388 reject_low 16 ALIGNMENT 0 YS2-12l16.p1k chr12 52 518 9371 9366 F 467 0.00 1388 reject_low 15 ALIGNMENT 20 YS2-12l16.p1k chr06 29 51 2850 2872 F 23 95.65 1388 reject_low 14 ALIGNMENT 20 YS2-12l16.p1k chr08 29 51 3545 3567 F 23 95.65 1388 reject_low 19 ALIGNMENT 40 YS2-12l16.p1k chr08 741 798 3685 3741 F 58 91.38 1388 reject_low 19 ALIGNMENT 0 YS2-12l16.p1k chr12 629 648 9446 9441 F 20 0.00 1388 reject_low 15 ALIGNMENT 0 YS2-12l16.p1k chr02 629 648 4112 4107 F 20 0.00 1388 reject_low 13 ALIGNMENT 820 YS2-12l16.p1k chr04 1134 29 1527368 1528466 C 1106 92.59 1388 reject_low 5 ALIGNMENT 0 YS2-12l16.p1k chr16 595 575 944300 944289 C 21 0.00 1388 reject_low 18 ALIGNMENT 29 YS2-12l16.p1k chr06 596 628 2915 2947 F 33 96.97 1388 reject_low 14 ALIGNMENT 20 YS2-12l16.p1k chr02 29 51 4014 4036 F 23 95.65 1388 reject_low 13 ALIGNMENT 936 YS2-12l17.p1k chr12 32 1090 281291 282351 F 1059 96.88 1344 accept 0 ALIGNMENT 1021 YS2-12l17.q1k chr12 1275 38 285156 286400 C 1238 94.67 1448 accept 0 ALIGNMENT 0 YS2-12l19.q1k vc_4 62 692 5831 5830 F 631 0.00 733 reject_low 5 ALIGNMENT 0 YS2-12l19.q1k vc_7 62 695 13525 13524 F 634 0.00 733 reject_low 7 ALIGNMENT 0 YS2-12l19.q1k chr03 733 693 84179 84178 C 41 0.00 733 reject_low 18 ALIGNMENT 0 YS2-12l19.q1k vc_3 692 62 2513 2512 C 631 0.00 733 reject_low 4 ALIGNMENT 0 YS2-12l19.q1k chr04 651 62 981316 981315 C 590 0.00 733 reject_low 9 ALIGNMENT 0 YS2-12l19.q1k chr03 693 733 168818 168817 F 41 0.00 733 reject_low 8 ALIGNMENT 41 YS2-12l19.q1k vc_3 733 693 2472 2512 C 41 100.00 733 reject_low 4 ALIGNMENT 26 YS2-12l19.q1k chr08 652 692 389362 389402 F 41 92.68 733 reject_low 13 ALIGNMENT 0 YS2-12l19.q1k chr15 733 690 354792 354791 C 44 0.00 733 reject_low 17 ALIGNMENT 0 YS2-12l19.q1k chr03 651 62 84219 84218 C 590 0.00 733 reject_low 18 ALIGNMENT 26 YS2-12l19.q1k chr07 652 692 111359 111399 F 41 92.68 733 reject_low 11 ALIGNMENT 0 YS2-12l19.q1k chr14 651 62 519315 519314 C 590 0.00 733 reject_low 15 ALIGNMENT 0 YS2-12l19.q1k vc_2 692 62 2146 2145 C 631 0.00 733 reject_low 3 ALIGNMENT 26 YS2-12l19.q1k chr07 652 692 562030 562070 F 41 92.68 733 reject_low 12 ALIGNMENT 0 YS2-12l19.q1k vc_1 692 62 2513 2512 C 631 0.00 733 reject_low 2 ALIGNMENT 0 YS2-12l19.q1k chr15 651 62 976060 976059 C 590 0.00 733 reject_low 16 ALIGNMENT 38 YS2-12l19.q1k vc_7 696 733 13525 13562 F 38 100.00 733 reject_low 7 ALIGNMENT 41 YS2-12l19.q1k vc_4 693 733 5831 5871 F 41 100.00 733 reject_low 5 ALIGNMENT 26 YS2-12l19.q1k chr10 692 652 538127 538167 C 41 92.68 733 reject_low 14 ALIGNMENT 0 YS2-12l19.q1k chr05 693 733 443619 443618 F 41 0.00 733 reject_low 10 ALIGNMENT 0 YS2-12l19.q1k chr14 733 693 519275 519274 C 41 0.00 733 reject_low 15 ALIGNMENT 0 YS2-12l19.q1k chr03 62 651 168778 168777 F 590 0.00 733 reject_low 8 ALIGNMENT 0 YS2-12l19.q1k chr16 733 693 777938 777937 C 41 0.00 733 accept_chi 1 ALIGNMENT 0 YS2-12l19.q1k vc_7 62 695 63 62 F 634 0.00 733 reject_low 6 ALIGNMENT 41 YS2-12l19.q1k vc_2 733 693 2105 2145 C 41 100.00 733 reject_low 3 ALIGNMENT 26 YS2-12l19.q1k chr15 692 652 976019 976059 C 41 92.68 733 reject_low 16 ALIGNMENT 26 YS2-12l19.q1k chr04 692 652 981275 981315 C 41 92.68 733 reject_low 9 ALIGNMENT 0 YS2-12l19.q1k chr08 693 733 389402 389401 F 41 0.00 733 reject_low 13 ALIGNMENT 26 YS2-12l19.q1k chr05 652 692 443579 443619 F 41 92.68 733 reject_low 10 ALIGNMENT 24 YS2-12l19.q1k chr15 689 651 354791 354829 C 39 92.31 733 reject_low 17 ALIGNMENT 0 YS2-12l19.q1k chr04 733 693 981276 981275 C 41 0.00 733 reject_low 9 ALIGNMENT 0 YS2-12l19.q1k chr08 62 651 389362 389361 F 590 0.00 733 reject_low 13 ALIGNMENT 0 YS2-12l19.q1k chr07 62 651 111359 111358 F 590 0.00 733 reject_low 11 ALIGNMENT 0 YS2-12l19.q1k chr15 733 693 976020 976019 C 41 0.00 733 reject_low 16 ALIGNMENT 26 YS2-12l19.q1k chr14 692 652 519274 519314 C 41 92.68 733 reject_low 15 ALIGNMENT 606 YS2-12l19.q1k chr16 692 40 777937 778586 C 653 98.77 733 accept_chi 1 ALIGNMENT 0 YS2-12l19.q1k chr15 650 62 354830 354829 C 589 0.00 733 reject_low 17 ALIGNMENT 0 YS2-12l19.q1k chr05 62 651 443579 443578 F 590 0.00 733 reject_low 10 ALIGNMENT 0 YS2-12l19.q1k chr10 733 693 538128 538127 C 41 0.00 733 reject_low 14 ALIGNMENT 0 YS2-12l19.q1k chr10 651 62 538168 538167 C 590 0.00 733 reject_low 14 ALIGNMENT 23 YS2-12l19.q1k chr03 692 652 84178 84218 C 41 90.24 733 reject_low 18 ALIGNMENT 41 YS2-12l19.q1k vc_1 733 693 2472 2512 C 41 100.00 733 reject_low 2 ALIGNMENT 0 YS2-12l19.q1k chr07 693 733 111399 111398 F 41 0.00 733 reject_low 11 ALIGNMENT 0 YS2-12l19.p1k chr16 680 698 778586 778585 F 19 0.00 698 accept_chi 0 ALIGNMENT 0 YS2-12l19.q1k chr07 693 733 562070 562069 F 41 0.00 733 reject_low 12 ALIGNMENT 602 YS2-12l19.p1k chr16 29 679 777937 778586 F 651 98.62 698 accept_chi 0 ALIGNMENT 26 YS2-12l19.q1k chr03 652 692 168778 168818 F 41 92.68 733 reject_low 8 ALIGNMENT 38 YS2-12l19.q1k vc_7 696 733 63 100 F 38 100.00 733 reject_low 6 ALIGNMENT 0 YS2-12l19.q1k chr07 62 651 562030 562029 F 590 0.00 733 reject_low 12 ALIGNMENT 0 YS2-12l20.q1k vc_3 179 62 2513 2512 C 118 0.00 220 reject_vc 3 ALIGNMENT 41 YS2-12l20.q1k vc_1 220 180 2472 2512 C 41 100.00 220 reject_vc 1 ALIGNMENT 41 YS2-12l20.q1k vc_3 220 180 2472 2512 C 41 100.00 220 reject_vc 3 ALIGNMENT 37 YS2-12l20.q1k vc_5 217 178 1 40 C 40 97.50 220 reject_vc 5 ALIGNMENT 0 YS2-12l20.q1k vc_4 62 179 5831 5830 F 118 0.00 220 reject_vc 4 ALIGNMENT 0 YS2-12l20.q1k vc_7 62 182 13525 13524 F 121 0.00 220 reject_vc 6 ALIGNMENT 38 YS2-12l20.q1k vc_7 183 220 13525 13562 F 38 100.00 220 reject_vc 6 ALIGNMENT 41 YS2-12l20.q1k vc_2 220 180 2105 2145 C 41 100.00 220 reject_vc 2 ALIGNMENT 0 YS2-12l20.q1k vc_2 179 62 2146 2145 C 118 0.00 220 reject_vc 2 ALIGNMENT 0 YS2-12l20.q1k vc_5 177 62 41 40 C 116 0.00 220 reject_vc 5 ALIGNMENT 41 YS2-12l20.q1k vc_4 180 220 5831 5871 F 41 100.00 220 reject_vc 4 ALIGNMENT 0 YS2-12l20.q1k vc_5 177 62 5068 5067 C 116 0.00 220 reject_vc 0 ALIGNMENT 0 YS2-12l20.q1k vc_1 179 62 2513 2512 C 118 0.00 220 reject_vc 1 ALIGNMENT 40 YS2-12l20.q1k vc_5 220 178 5025 5067 C 43 97.67 220 reject_vc 0 ALIGNMENT 0 YS2-12l21.q1k chr09 729 870 341418 341417 F 142 0.00 1310 reject_low 1 ALIGNMENT 253 YS2-12l21.q1k chr09 30 728 340720 341418 F 699 79.40 1310 reject_low 1 ALIGNMENT 969 YS2-12l21.q1k chr13 30 1151 761185 762325 F 1122 96.17 1310 accept 0 ALIGNMENT 1041 YS2-12l21.p1k chr13 1197 30 761714 762887 C 1168 97.52 1234 accept 0 ALIGNMENT 1009 YS2-12l22.p1k chr12 1164 30 136687 137825 C 1135 97.09 1235 accept 0 ALIGNMENT 947 YS2-12l22.q1k chr12 38 1054 136686 137711 F 1017 98.53 1280 accept 0 ALIGNMENT 61 YS2-12l23.q1k vc_4 304 238 46 112 C 67 97.01 786 reject_low 13 ALIGNMENT 246 YS2-12l23.p1k vc_2 392 1 1366 1749 C 392 89.29 562 reject_low 3 ALIGNMENT 296 YS2-12l23.q1k vc_2 1 303 2322 2624 F 303 99.01 786 reject_low 9 ALIGNMENT 0 YS2-12l23.q1k vc_4 237 62 6340 6339 C 176 0.00 786 reject_low 14 ALIGNMENT 246 YS2-12l23.p1k vc_6 1 392 3712 4095 F 392 89.29 562 reject_low 5 ALIGNMENT 482 YS2-12l23.q1k vc_7 625 1 1939 2569 C 625 91.84 786 reject_low 1 ALIGNMENT 246 YS2-12l23.p1k vc_3 392 1 1366 1749 C 392 89.29 562 reject_low 4 ALIGNMENT 246 YS2-12l23.p1k vc_5 392 1 4286 4669 C 392 89.29 562 reject_vc 0 ALIGNMENT 0 YS2-12l23.q1k vc_7 304 304 4700 4921 C 1 0.00 786 reject_low 12 ALIGNMENT 242 YS2-12l23.q1k vc_7 303 53 4922 5172 C 251 98.41 786|0,1 reject_low 12 ALIGNMENT 101 YS2-12l23.q1k vc_7 413 305 4591 4699 C 109 97.25 786 reject_low 12 ALIGNMENT 0 YS2-12l23.q1k vc_4 62 237 1548 1547 F 176 0.00 786 reject_low 11 ALIGNMENT 246 YS2-12l23.p1k vc_1 392 1 1366 1749 C 392 89.29 562 reject_low 2 ALIGNMENT 240 YS2-12l23.p1k vc_7 1 392 456 839 F 392 88.78 562 reject_low 1 ALIGNMENT 393 YS2-12l23.q1k vc_4 413 1 5240 5654 C 413 98.06 786 reject_low 7 ALIGNMENT 0 YS2-12l23.q1k vc_7 53 54 5172 6360 C 0 0.00 786 reject_low 12 ALIGNMENT 51 YS2-12l23.q1k vc_7 54 3 6360 6411 C 52 100.00 786|1,0 reject_low 12 ALIGNMENT 187 YS2-12l23.q1k vc_4 308 668 1879 2250 F 361 83.93 786 reject_low 11 ALIGNMENT 296 YS2-12l23.q1k vc_3 1 303 2689 2991 F 303 99.01 786 reject_low 10 ALIGNMENT 491 YS2-12l23.q1k vc_5 1 668 2556 3234 F 668 90.87 786 reject_vc 0 ALIGNMENT 296 YS2-12l23.q1k vc_1 1 303 2689 2991 F 303 99.01 786 reject_low 8 ALIGNMENT 61 YS2-12l23.q1k vc_4 304 238 6273 6339 C 67 97.01 786 reject_low 14 ALIGNMENT 0 YS2-12l23.q1k vc_4 305 307 1615 1878 F 3 0.00 786 reject_low 11 ALIGNMENT 0 YS2-12l23.q1k vc_4 237 62 113 112 C 176 0.00 786 reject_low 13 ALIGNMENT 61 YS2-12l23.q1k vc_4 238 304 1548 1614 F 67 97.01 786 reject_low 11 ALIGNMENT 240 YS2-12l23.p1k vc_7 1 392 13918 14301 F 392 88.78 562 reject_low 6 ALIGNMENT 956 YS2-12l24.p1k chr10 1278 52 114347 115599 C 1227 93.81 1287 accept 0 ALIGNMENT 908 YS2-12l24.q1k chr10 37 1140 109536 110645 F 1104 95.29 1305 accept 0 ALIGNMENT 998 YS2-12m01.p1k chr13 1221 31 38089 39288 C 1191 95.97 1264 accept 0 ALIGNMENT 938 YS2-12m01.q1k chr13 36 1111 35187 36275 F 1076 96.75 1277 accept 0 ALIGNMENT 949 YS2-12m02.q1k chr05 40 1130 20469 21564 F 1091 96.70 1326 reject_low 1 ALIGNMENT 921 YS2-12m02.p1k chr14 34 1125 769612 770718 F 1092 95.88 1285 accept 0 ALIGNMENT 910 YS2-12m02.q1k chr14 1130 40 774324 775420 C 1091 95.51 1326 accept 0 ALIGNMENT 39 YS2-12m03.q1k vc_5 237 199 5025 5063 C 39 100.00 237 reject_low 5 ALIGNMENT 36 YS2-12m03.q1k vc_5 234 199 1 36 C 36 100.00 237 reject_low 7 ALIGNMENT 41 YS2-12m03.q1k vc_4 197 237 5831 5871 F 41 100.00 237 reject_low 4 ALIGNMENT 0 YS2-12m03.q1k vc_1 196 62 2513 2512 C 135 0.00 237 reject_low 2 ALIGNMENT 0 YS2-12m03.q1k vc_4 62 196 5831 5830 F 135 0.00 237 reject_low 4 ALIGNMENT 41 YS2-12m03.q1k vc_3 237 197 2472 2512 C 41 100.00 237 reject_low 3 ALIGNMENT 158 YS2-12m03.q1k chr13 196 35 686179 686340 C 162 99.38 237 accept_chi 1 ALIGNMENT 0 YS2-12m03.q1k chr13 237 197 686180 686179 C 41 0.00 237 accept_chi 1 ALIGNMENT 0 YS2-12m03.q1k vc_5 198 62 37 36 C 137 0.00 237 reject_low 7 ALIGNMENT 0 YS2-12m03.p1k chr13 222 240 686345 686344 F 19 0.00 240 accept_chi 0 ALIGNMENT 38 YS2-12m03.q1k vc_7 200 237 13525 13562 F 38 100.00 237 reject_low 6 ALIGNMENT 41 YS2-12m03.q1k vc_1 237 197 2472 2512 C 41 100.00 237 reject_low 2 ALIGNMENT 0 YS2-12m03.q1k vc_5 198 62 5064 5063 C 137 0.00 237 reject_low 5 ALIGNMENT 160 YS2-12m03.p1k chr13 57 221 686181 686345 F 165 99.39 240 accept_chi 0 ALIGNMENT 0 YS2-12m03.q1k vc_7 62 199 13525 13524 F 138 0.00 237 reject_low 6 ALIGNMENT 0 YS2-12m03.q1k vc_3 196 62 2513 2512 C 135 0.00 237 reject_low 3 ALIGNMENT 0 YS2-12m05.q1k chr07 62 893 876397 876396 F 832 0.00 1324 reject_low 8 ALIGNMENT 76 YS2-12m05.q1k chr05 975 881 435740 435834 C 95 93.68 1324 reject_low 3 ALIGNMENT 80 YS2-12m05.q1k chr04 353 77 651103 651380 C 277 78.70 1324 reject_low 9 ALIGNMENT 68 YS2-12m05.q1k chr04 375 94 513255 513535 C 282 78.37 1324 reject_low 18 ALIGNMENT 0 YS2-12m05.q1k chr05 880 62 435835 435834 C 819 0.00 1324 reject_low 3 ALIGNMENT 69 YS2-12m05.q1k chr11 895 975 202644 202725 F 81 95.06 1324 reject_low 14 ALIGNMENT 0 YS2-12m05.q1k chr09 284 62 300501 300500 C 223 0.00 1324 reject_low 22 ALIGNMENT 26 YS2-12m05.q1k chr09 365 285 300417 300500 C 81 80.25 1324 reject_low 22 ALIGNMENT 0 YS2-12m05.q1k chr07 62 93 535266 535265 F 32 0.00 1324 reject_low 19 ALIGNMENT 0 YS2-12m05.q1k chr10 893 315 537715 537714 C 579 0.00 1324 reject_low 15 ALIGNMENT 68 YS2-12m05.q1k chr10 894 968 414879 414953 F 75 96.00 1324 reject_low 16 ALIGNMENT 99 YS2-12m05.q1k chr03 64 361 149502 149793 F 298 81.21 1324 reject_low 4 ALIGNMENT 68 YS2-12m05.q1k chr07 894 976 122271 122355 F 83 93.98 1324 reject_low 12 ALIGNMENT 938 YS2-12m05.p1k chr13 29 1154 477744 478873 F 1126 94.85 1297 accept 0 ALIGNMENT 71 YS2-12m05.q1k chr07 94 363 535266 535534 F 270 79.26 1324 reject_low 19 ALIGNMENT 0 YS2-12m05.q1k chr04 893 376 513256 513255 C 518 0.00 1324 reject_low 18 ALIGNMENT 0 YS2-12m05.q1k chr03 93 62 124412 124411 C 32 0.00 1324 reject_low 17 ALIGNMENT 71 YS2-12m05.q1k chr04 888 968 1201732 1201812 F 81 95.06 1324 reject_low 5 ALIGNMENT 0 YS2-12m05.q1k chr04 76 62 651381 651380 C 15 0.00 1324 reject_low 9 ALIGNMENT 0 YS2-12m05.q1k chr04 93 62 513536 513535 C 32 0.00 1324 reject_low 18 ALIGNMENT 0 YS2-12m05.q1k chr13 215 893 481740 481739 F 679 0.00 1324 reject_low 21 ALIGNMENT 0 YS2-12m05.q1k chr06 893 364 161811 161810 C 530 0.00 1324 reject_low 20 ALIGNMENT 0 YS2-12m05.q1k chr07 364 893 535534 535533 F 530 0.00 1324 reject_low 19 ALIGNMENT 0 YS2-12m05.q1k chr09 893 366 300301 300416 C 528 0.00 1324 reject_low 22 ALIGNMENT 0 YS2-12m05.q1k chr11 93 62 313528 313527 C 32 0.00 1324 reject_low 2 ALIGNMENT 991 YS2-12m05.q1k chr13 1168 38 480409 481550 C 1131 97.17 1324 accept 0 ALIGNMENT 131 YS2-12m05.q1k chr11 353 94 313269 313527 C 260 85.77 1324 reject_low 2 ALIGNMENT 71 YS2-12m05.q1k chr04 976 894 1352447 1352530 C 83 95.18 1324 reject_low 6 ALIGNMENT 71 YS2-12m05.q1k chr07 894 976 876397 876480 F 83 95.18 1324 reject_low 8 ALIGNMENT 0 YS2-12m05.q1k chr07 62 893 122271 122270 F 832 0.00 1324 reject_low 12 ALIGNMENT 60 YS2-12m05.q1k chr06 363 94 161810 162078 C 270 78.15 1324 reject_low 20 ALIGNMENT 0 YS2-12m05.q1k chr04 893 376 434421 434420 C 518 0.00 1324 reject_low 1 ALIGNMENT 0 YS2-12m05.q1k chr11 62 894 202644 202643 F 833 0.00 1324 reject_low 14 ALIGNMENT 72 YS2-12m05.q1k chr10 314 70 537714 537954 C 245 80.00 1324 reject_low 15 ALIGNMENT 0 YS2-12m05.q1k chr05 894 62 135499 135498 C 833 0.00 1324 reject_low 13 ALIGNMENT 140 YS2-12m05.q1k chr04 375 94 434420 434700 C 282 85.46 1324 reject_low 1 ALIGNMENT 0 YS2-12m05.q1k chr03 894 62 151355 151354 C 833 0.00 1324 reject_low 10 ALIGNMENT 0 YS2-12m05.q1k chr03 362 893 149793 149792 F 532 0.00 1324 reject_low 4 ALIGNMENT 0 YS2-12m05.q1k chr03 893 376 124132 124131 C 518 0.00 1324 reject_low 17 ALIGNMENT 71 YS2-12m05.q1k chr07 976 894 185711 185794 C 83 95.18 1324 reject_low 7 ALIGNMENT 74 YS2-12m05.q1k chr03 375 94 124131 124411 C 282 79.43 1324 reject_low 17 ALIGNMENT 0 YS2-12m05.q1k chr16 62 894 582058 582057 F 833 0.00 1324 reject_low 11 ALIGNMENT 65 YS2-12m05.q1k chr09 975 894 300219 300300 C 82 93.90 1324 reject_low 22 ALIGNMENT 0 YS2-12m05.q1k chr07 893 62 185795 185794 C 832 0.00 1324 reject_low 7 ALIGNMENT 70 YS2-12m05.q1k chr16 895 976 582058 582140 F 82 95.12 1324 reject_low 11 ALIGNMENT 70 YS2-12m05.q1k chr03 976 895 151272 151354 C 82 95.12 1324 reject_low 10 ALIGNMENT 36 YS2-12m05.q1k chr13 62 214 481589 481740 F 153 77.78 1324 reject_low 21 ALIGNMENT 0 YS2-12m05.q1k chr06 93 62 162079 162078 C 32 0.00 1324 reject_low 20 ALIGNMENT 0 YS2-12m05.q1k chr04 93 62 434701 434700 C 32 0.00 1324 reject_low 1 ALIGNMENT 0 YS2-12m05.q1k chr04 893 62 1352531 1352530 C 832 0.00 1324 reject_low 6 ALIGNMENT 0 YS2-12m05.q1k chr04 62 887 1201732 1201731 F 826 0.00 1324 reject_low 5 ALIGNMENT 69 YS2-12m05.q1k chr05 975 895 135417 135498 C 81 95.06 1324 reject_low 13 ALIGNMENT 0 YS2-12m05.q1k chr11 893 354 313270 313269 C 540 0.00 1324 reject_low 2 ALIGNMENT 0 YS2-12m05.q1k chr04 893 354 651104 651103 C 540 0.00 1324 reject_low 9 ALIGNMENT 0 YS2-12m05.q1k chr10 62 893 414879 414878 F 832 0.00 1324 reject_low 16 ALIGNMENT 861 YS2-12m06.p1k chrm 1122 28 6621 7708 C 1095 97.63 1371 reject_bad_break 0 ALIGNMENT 512 YS2-12m06.q1k chrm 38 842 5389 6193 F 805 97.02 1387 reject_bad_break 0 ALIGNMENT 52 YS2-12m06.p1k chr12 901 844 682553 682610 C 58 98.28 1371 reject_low 1 ALIGNMENT 0 YS2-12m06.q1k chrm 843 842 6194 6228 F 0 0.00 1387 reject_bad_break 0 ALIGNMENT 0 YS2-12m06.q1k chrm 62 858 6246 6245 F 797 0.00 1387 reject_low 2 ALIGNMENT 30 YS2-12m06.q1k chrm 843 989 6229 6375 F 147 87.76 1387 reject_bad_break 0 ALIGNMENT 21 YS2-12m06.q1k chrm 859 1034 6246 6417 F 176 84.66 1387 reject_low 2 ALIGNMENT 0 YS2-12m06.p1k chr12 843 62 682611 682610 C 782 0.00 1371 reject_low 1 ALIGNMENT 0 YS2-12m07.q1k chr06 142 62 181039 181038 C 81 0.00 470 reject_low 41 ALIGNMENT 0 YS2-12m07.p1k chr04 252 62 992904 992903 C 191 0.00 467 reject_low 32 ALIGNMENT 0 YS2-12m07.p1k chr16 467 331 572267 572266 C 137 0.00 467 reject_low 31 ALIGNMENT 0 YS2-12m07.q1k vc_7 62 432 13525 13524 F 371 0.00 470 reject_low 4 ALIGNMENT 0 YS2-12m07.p1k chr09 380 62 205524 205523 C 319 0.00 467 reject_low 8 ALIGNMENT 74 YS2-12m07.q1k chr07 222 143 930949 931028 C 80 97.50 470 reject_low 35 ALIGNMENT 0 YS2-12m07.q1k chr02 470 225 197624 197623 C 246 0.00 470 reject_low 27 ALIGNMENT 0 YS2-12m07.p1k chr14 380 62 726543 726542 C 319 0.00 467 reject_low 10 ALIGNMENT 84 YS2-12m07.q1k chr16 129 215 860359 860445 F 87 98.85 470 reject_low 16 ALIGNMENT 0 YS2-12m07.q1k chr10 62 143 531741 531740 F 82 0.00 470 reject_low 24 ALIGNMENT 73 YS2-12m07.p1k chr04 331 259 83548 83620 C 73 100.00 467 reject_low 37 ALIGNMENT 84 YS2-12m07.p1k chr16 346 260 860359 860445 C 87 98.85 467 reject_low 15 ALIGNMENT 0 YS2-12m07.q1k chr07 470 223 930950 930949 C 248 0.00 470 reject_low 35 ALIGNMENT 0 YS2-12m07.q1k chr13 144 62 183969 183968 C 83 0.00 470 reject_low 34 ALIGNMENT 0 YS2-12m07.p1k chr09 467 450 205456 205455 C 18 0.00 467 reject_low 8 ALIGNMENT 72 YS2-12m07.q1k chr10 144 225 531741 531822 F 82 96.34 470 reject_low 24 ALIGNMENT 72 YS2-12m07.q1k chr13 224 145 183888 183968 C 80 97.50 470 reject_low 34 ALIGNMENT 0 YS2-12m07.q1k chr06 62 139 162217 162216 F 78 0.00 470 reject_low 30 ALIGNMENT 0 YS2-12m07.p1k chr15 62 251 226601 226600 F 190 0.00 467 reject_low 29 ALIGNMENT 0 YS2-12m07.q1k chr06 216 470 162292 162291 F 255 0.00 470 reject_low 30 ALIGNMENT 0 YS2-12m07.p1k chr02 62 250 197623 197622 F 189 0.00 467 reject_low 22 ALIGNMENT 0 YS2-12m07.p1k chr16 259 62 860446 860445 C 198 0.00 467 reject_low 15 ALIGNMENT 0 YS2-12m07.p1k chr04 467 332 992826 992825 C 136 0.00 467 reject_low 32 ALIGNMENT 0 YS2-12m07.p1k chr03 62 250 142690 142689 F 189 0.00 467 reject_low 26 ALIGNMENT 70 YS2-12m07.q1k chr15 145 215 282164 282234 F 71 100.00 470 reject_low 43 ALIGNMENT 0 YS2-12m07.p1k chr10 467 332 531742 531741 C 136 0.00 467 reject_low 21 ALIGNMENT 72 YS2-12m07.p1k chr04 331 253 992825 992903 C 79 97.47 467 reject_low 32 ALIGNMENT 0 YS2-12m07.q1k vc_1 429 62 2513 2512 C 368 0.00 470 reject_low 2 ALIGNMENT 0 YS2-12m07.p1k chr14 467 450 546978 546977 C 18 0.00 467 reject_low 5 ALIGNMENT 74 YS2-12m07.p1k chr05 260 339 61890 61969 F 80 97.50 467 reject_low 19 ALIGNMENT 0 YS2-12m07.p1k chr01 380 62 182921 182920 C 319 0.00 467 reject_low 6 ALIGNMENT 73 YS2-12m07.p1k chr15 252 331 226601 226680 F 80 97.50 467 reject_low 29 ALIGNMENT 73 YS2-12m07.p1k chr16 330 254 572266 572342 C 77 98.70 467 reject_low 31 ALIGNMENT 0 YS2-12m07.p1k chr13 62 250 183888 183887 F 189 0.00 467 reject_low 28 ALIGNMENT 0 YS2-12m07.p1k chr16 467 347 860360 860359 C 121 0.00 467 reject_low 15 ALIGNMENT 0 YS2-12m07.q1k chr04 62 143 83548 83547 F 82 0.00 470 reject_low 42 ALIGNMENT 58 YS2-12m07.p1k chr09 449 381 205455 205523 C 69 95.65 467 reject_low 8 ALIGNMENT 0 YS2-12m07.q1k chr14 95 470 547045 547044 F 376 0.00 470 reject_low 12 ALIGNMENT 0 YS2-12m07.p1k chr02 333 467 197704 197703 F 135 0.00 467 reject_low 22 ALIGNMENT 72 YS2-12m07.p1k chr03 251 331 142690 142769 F 81 97.53 467 reject_low 26 ALIGNMENT 0 YS2-12m07.p1k chr14 380 62 547046 547045 C 319 0.00 467 reject_low 5 ALIGNMENT 75 YS2-12m07.p1k chr02 251 332 197623 197704 F 82 97.56 467 reject_low 22 ALIGNMENT 0 YS2-12m07.q1k chr02 142 62 197705 197704 C 81 0.00 470 reject_low 27 ALIGNMENT 57 YS2-12m07.p1k chr12 442 381 374245 374306 C 62 98.39 467 reject_low 11 ALIGNMENT 0 YS2-12m07.q1k chr15 470 224 226602 226601 C 247 0.00 470 reject_low 36 ALIGNMENT 0 YS2-12m07.p1k chr12 467 443 374246 374245 C 25 0.00 467 reject_low 11 ALIGNMENT 0 YS2-12m07.p1k chr07 467 450 845536 845535 C 18 0.00 467 accept_chi 1 ALIGNMENT 0 YS2-12m07.q1k chr07 430 470 845938 845937 F 41 0.00 470 accept_chi 0 ALIGNMENT 51 YS2-12m07.q1k chr08 94 33 146357 146418 C 62 95.16 470 reject_low 14 ALIGNMENT 389 YS2-12m07.q1k chr07 27 429 845536 845938 F 403 99.50 470 accept_chi 0 ALIGNMENT 0 YS2-12m07.q1k chr06 470 216 180967 180966 C 255 0.00 470 reject_low 41 ALIGNMENT 76 YS2-12m07.q1k chr06 140 215 162217 162292 F 76 100.00 470 reject_low 30 ALIGNMENT 0 YS2-12m07.q1k chr10 226 470 531822 531821 F 245 0.00 470 reject_low 24 ALIGNMENT 0 YS2-12m07.q1k chr08 470 95 146358 146357 C 376 0.00 470 reject_low 14 ALIGNMENT 38 YS2-12m07.q1k vc_7 433 470 63 100 F 38 100.00 470 reject_low 3 ALIGNMENT 0 YS2-12m07.p1k chr09 380 62 210612 210611 C 319 0.00 467 reject_low 9 ALIGNMENT 0 YS2-12m07.q1k chr10 470 216 396643 396642 C 255 0.00 470 reject_low 18 ALIGNMENT 58 YS2-12m07.p1k chr01 449 381 182852 182920 C 69 95.65 467 reject_low 6 ALIGNMENT 0 YS2-12m07.q1k chr15 216 470 282234 282233 F 255 0.00 470 reject_low 43 ALIGNMENT 58 YS2-12m07.p1k chr09 449 381 210543 210611 C 69 95.65 467 reject_low 9 ALIGNMENT 0 YS2-12m07.q1k chr03 470 225 142691 142690 C 246 0.00 470 reject_low 33 ALIGNMENT 0 YS2-12m07.p1k chr13 331 467 183968 183967 F 137 0.00 467 reject_low 28 ALIGNMENT 0 YS2-12m07.p1k chr02 467 450 197957 197956 C 18 0.00 467 reject_low 7 ALIGNMENT 73 YS2-12m07.q1k chr04 144 216 83548 83620 F 73 100.00 470 reject_low 42 ALIGNMENT 0 YS2-12m07.p1k chr07 62 252 930949 930948 F 191 0.00 467 reject_low 25 ALIGNMENT 54 YS2-12m07.q1k chr12 33 94 374245 374306 F 62 96.77 470 reject_low 13 ALIGNMENT 74 YS2-12m07.q1k chr10 215 130 396642 396727 C 86 95.35 470 reject_low 18 ALIGNMENT 0 YS2-12m07.q1k vc_7 62 432 63 62 F 371 0.00 470 reject_low 3 ALIGNMENT 0 YS2-12m07.p1k chr10 62 259 396642 396641 F 198 0.00 467 reject_low 17 ALIGNMENT 73 YS2-12m07.q1k chr16 145 221 572266 572342 F 77 98.70 470 reject_low 38 ALIGNMENT 0 YS2-12m07.q1k chr15 143 62 226681 226680 C 82 0.00 470 reject_low 36 ALIGNMENT 72 YS2-12m07.p1k chr10 331 250 531741 531822 C 82 96.34 467 reject_low 21 ALIGNMENT 0 YS2-12m07.q1k chr10 129 62 396728 396727 C 68 0.00 470 reject_low 18 ALIGNMENT 0 YS2-12m07.q1k chr03 143 62 142770 142769 C 82 0.00 470 reject_low 33 ALIGNMENT 0 YS2-12m07.p1k chr06 467 336 162218 162217 C 132 0.00 467 reject_low 23 ALIGNMENT 0 YS2-12m07.p1k chr05 340 467 61969 61968 F 128 0.00 467 reject_low 19 ALIGNMENT 0 YS2-12m07.q1k chr15 62 144 282164 282163 F 83 0.00 470 reject_low 43 ALIGNMENT 0 YS2-12m07.p1k chr01 467 450 182853 182852 C 18 0.00 467 reject_low 6 ALIGNMENT 74 YS2-12m07.p1k chr07 253 332 930949 931028 F 80 97.50 467 reject_low 25 ALIGNMENT 0 YS2-12m07.p1k chr06 259 62 162293 162292 C 198 0.00 467 reject_low 23 ALIGNMENT 0 YS2-12m07.p1k chr10 346 467 396727 396726 F 122 0.00 467 reject_low 17 ALIGNMENT 70 YS2-12m07.p1k chr15 330 260 282164 282234 C 71 100.00 467 reject_low 40 ALIGNMENT 0 YS2-12m07.q1k chr16 62 128 860359 860358 F 67 0.00 470 reject_low 16 ALIGNMENT 58 YS2-12m07.p1k chr02 449 381 197956 198024 C 69 95.65 467 reject_low 7 ALIGNMENT 0 YS2-12m07.p1k chr04 467 332 83549 83548 C 136 0.00 467 reject_low 37 ALIGNMENT 0 YS2-12m07.q1k chr05 470 216 61891 61890 C 255 0.00 470 reject_low 20 ALIGNMENT 0 YS2-12m07.p1k chr09 467 450 210544 210543 C 18 0.00 467 reject_low 9 ALIGNMENT 0 YS2-12m07.q1k chr04 62 143 992825 992824 F 82 0.00 470 reject_low 39 ALIGNMENT 74 YS2-12m07.q1k chr05 215 136 61890 61969 C 80 97.50 470 reject_low 20 ALIGNMENT 0 YS2-12m07.p1k chr15 332 467 226680 226679 F 136 0.00 467 reject_low 29 ALIGNMENT 377 YS2-12m07.p1k chr07 449 53 845535 845933 C 397 99.24 467 accept_chi 1 ALIGNMENT 0 YS2-12m07.p1k chr03 332 467 142769 142768 F 136 0.00 467 reject_low 26 ALIGNMENT 57 YS2-12m07.q1k chr14 33 94 546984 547045 F 62 98.39 470 reject_low 12 ALIGNMENT 72 YS2-12m07.q1k chr04 144 222 992825 992903 F 79 97.47 470 reject_low 39 ALIGNMENT 58 YS2-12m07.p1k chr14 449 381 726474 726542 C 69 95.65 467 reject_low 10 ALIGNMENT 74 YS2-12m07.p1k chr10 260 345 396642 396727 F 86 95.35 467 reject_low 17 ALIGNMENT 72 YS2-12m07.q1k chr03 224 144 142690 142769 C 81 97.53 470 reject_low 33 ALIGNMENT 72 YS2-12m07.p1k chr13 251 330 183888 183968 F 80 97.50 467 reject_low 28 ALIGNMENT 76 YS2-12m07.p1k chr06 335 260 162217 162292 C 76 100.00 467 reject_low 23 ALIGNMENT 0 YS2-12m07.q1k chr16 62 144 572266 572265 F 83 0.00 470 reject_low 38 ALIGNMENT 0 YS2-12m07.q1k chr07 142 62 931029 931028 C 81 0.00 470 reject_low 35 ALIGNMENT 0 YS2-12m07.q1k chr12 95 470 374306 374305 F 376 0.00 470 reject_low 13 ALIGNMENT 38 YS2-12m07.q1k vc_7 433 470 13525 13562 F 38 100.00 470 reject_low 4 ALIGNMENT 0 YS2-12m07.p1k chr05 62 259 61890 61889 F 198 0.00 467 reject_low 19 ALIGNMENT 0 YS2-12m07.p1k chr07 333 467 931028 931027 F 135 0.00 467 reject_low 25 ALIGNMENT 75 YS2-12m07.q1k chr02 224 143 197623 197704 C 82 97.56 470 reject_low 27 ALIGNMENT 0 YS2-12m07.q1k chr16 216 470 860445 860444 F 255 0.00 470 reject_low 16 ALIGNMENT 0 YS2-12m07.p1k chr04 258 62 83621 83620 C 197 0.00 467 reject_low 37 ALIGNMENT 0 YS2-12m07.p1k chr02 380 62 198025 198024 C 319 0.00 467 reject_low 7 ALIGNMENT 73 YS2-12m07.q1k chr06 215 143 180966 181038 C 73 100.00 470 reject_low 41 ALIGNMENT 0 YS2-12m07.p1k chr12 380 62 374307 374306 C 319 0.00 467 reject_low 11 ALIGNMENT 0 YS2-12m07.q1k chr04 217 470 83620 83619 F 254 0.00 470 reject_low 42 ALIGNMENT 0 YS2-12m07.p1k chr15 467 331 282165 282164 C 137 0.00 467 reject_low 40 ALIGNMENT 0 YS2-12m07.p1k chr16 253 62 572343 572342 C 192 0.00 467 reject_low 31 ALIGNMENT 0 YS2-12m07.q1k chr05 135 62 61970 61969 C 74 0.00 470 reject_low 20 ALIGNMENT 61 YS2-12m07.p1k chr14 449 381 546977 547045 C 69 97.10 467 reject_low 5 ALIGNMENT 41 YS2-12m07.q1k vc_1 470 430 2472 2512 C 41 100.00 470 reject_low 2 ALIGNMENT 0 YS2-12m07.p1k chr10 249 62 531823 531822 C 188 0.00 467 reject_low 21 ALIGNMENT 0 YS2-12m07.p1k chr15 259 62 282235 282234 C 198 0.00 467 reject_low 40 ALIGNMENT 0 YS2-12m07.q1k chr13 470 225 183889 183888 C 246 0.00 470 reject_low 34 ALIGNMENT 0 YS2-12m07.q1k chr04 223 470 992903 992902 F 248 0.00 470 reject_low 39 ALIGNMENT 0 YS2-12m07.p1k chr14 467 450 726475 726474 C 18 0.00 467 reject_low 10 ALIGNMENT 0 YS2-12m07.q1k chr16 222 470 572342 572341 F 249 0.00 470 reject_low 38 ALIGNMENT 73 YS2-12m07.q1k chr15 223 144 226601 226680 C 80 97.50 470 reject_low 36 ALIGNMENT 1008 YS2-12m08.q1k chr12 1152 40 456183 457292 C 1113 96.59 1393 accept 0 ALIGNMENT 1008 YS2-12m08.q1k chr12 1152 40 465320 466429 C 1113 96.59 1393 accept 1 ALIGNMENT 891 YS2-12m09.p1k chr04 1125 64 444259 445325 C 1062 96.05 1308 accept 0 ALIGNMENT 0 YS2-12m09.p1k chr04 696 107 444693 444692 C 590 0.00 1308 reject_low 1 ALIGNMENT 22 YS2-12m09.p1k chr06 926 882 78001 78044 C 45 93.33 1308 reject_low 2 ALIGNMENT 286 YS2-12m09.p1k chr04 1094 697 444294 444692 C 398 93.47 1308 reject_low 1 ALIGNMENT 763 YS2-12m09.q1k chr04 39 887 440518 441369 F 849 97.41 1227 accept 0 ALIGNMENT 0 YS2-12m09.p1k chr06 881 107 78045 78044 C 775 0.00 1308 reject_low 2 ALIGNMENT 20 YS2-12m11.p1k chr12 1028 1080 5563 5617 F 53 81.13 1300 reject_low 16 ALIGNMENT 0 YS2-12m11.p1k chr16 872 845 942805 942804 C 28 0.00 1300 reject_low 9 ALIGNMENT 716 YS2-12m11.q1k chr01 31 1095 226344 227412 F 1065 90.14 1348 reject_low 1 ALIGNMENT 697 YS2-12m11.p1k chr12 1080 29 1065197 1066202 C 1052 91.44 1300 reject_low 7 ALIGNMENT 0 YS2-12m11.p1k chr12 1022 1027 11081 11097 F 6 0.00 1300 reject_low 17 ALIGNMENT 0 YS2-12m11.p1k chr15 1027 1022 1084714 1084730 C 6 0.00 1300 reject_low 15 ALIGNMENT 816 YS2-12m11.p1k chr05 1080 29 570368 571399 C 1052 94.30 1300 reject_low 4 ALIGNMENT 733 YS2-12m11.p1k chr08 1021 29 557102 558071 C 993 93.15 1300 reject_bad_break 0 ALIGNMENT 0 YS2-12m11.p1k chr07 1027 1022 1084450 1084466 C 6 0.00 1300 reject_low 10 ALIGNMENT 738 YS2-12m11.p1k chr02 29 1021 4760 5730 F 993 93.25 1300 reject_low 20 ALIGNMENT 0 YS2-12m11.p1k chr08 1027 1022 557085 557101 C 6 0.00 1300 reject_bad_break 0 ALIGNMENT 20 YS2-12m11.p1k chr13 1028 1080 5439 5493 F 53 81.13 1300 reject_low 18 ALIGNMENT 0 YS2-12m11.p1k chr12 1027 1022 1071750 1071766 C 6 0.00 1300 reject_low 14 ALIGNMENT 626 YS2-12m11.p1k chr05 29 954 5464 6338 F 926 91.90 1300 reject_low 19 ALIGNMENT 854 YS2-12m11.p1k chr16 29 1021 5418 6410 F 993 96.17 1300 reject_low 12 ALIGNMENT 20 YS2-12m11.p1k chr02 1028 1080 5748 5802 F 53 81.13 1300 reject_low 20 ALIGNMENT 313 YS2-12m11.q1k chr02 531 34 429552 430049 C 498 87.75 1348 reject_low 5 ALIGNMENT 0 YS2-12m11.p1k chr12 1022 1027 5546 5562 F 6 0.00 1300 reject_low 16 ALIGNMENT 809 YS2-12m11.p1k chr15 1021 29 1084731 1085718 C 993 95.07 1300 reject_low 15 ALIGNMENT 0 YS2-12m11.p1k chr16 1022 1027 6411 6427 F 6 0.00 1300 reject_low 12 ALIGNMENT 923 YS2-12m11.p1k chr09 29 1051 5898 6923 F 1023 97.56 1300 reject_low 2 ALIGNMENT 1061 YS2-12m11.q1k chr08 31 1279 552992 554247 F 1249 95.60 1348 reject_bad_break 0 ALIGNMENT 795 YS2-12m11.p1k chr12 29 1021 4559 5545 F 993 94.66 1300 reject_low 16 ALIGNMENT 20 YS2-12m11.p1k chr14 1028 1080 6519 6573 F 53 81.13 1300 reject_low 11 ALIGNMENT 542 YS2-12m11.p1k chr08 29 696 4291 4951 F 668 95.21 1300 reject_low 21 ALIGNMENT 0 YS2-12m11.p1k chr04 1027 1022 1525549 1525565 C 6 0.00 1300 reject_low 13 ALIGNMENT 22 YS2-12m11.p1k chr08 834 858 4972 4996 F 25 96.00 1300 reject_low 21 ALIGNMENT 281 YS2-12m11.q1k chr02 543 35 427690 428198 C 509 85.27 1348 reject_low 6 ALIGNMENT 747 YS2-12m11.p1k chr16 844 29 942804 943617 C 816 98.04 1300 reject_low 9 ALIGNMENT 20 YS2-12m11.p1k chr07 1080 1028 1084395 1084449 C 53 81.13 1300 reject_low 10 ALIGNMENT 854 YS2-12m11.p1k chr14 29 1021 5509 6501 F 993 96.17 1300 reject_low 11 ALIGNMENT 795 YS2-12m11.p1k chr12 29 1021 10094 11080 F 993 94.66 1300 reject_low 17 ALIGNMENT 0 YS2-12m11.p1k chr13 1022 1027 5422 5438 F 6 0.00 1300 reject_low 18 ALIGNMENT 809 YS2-12m11.p1k chr12 1021 29 1071767 1072754 C 993 95.07 1300 reject_low 14 ALIGNMENT 0 YS2-12m11.q1k chr02 872 532 429553 429552 C 341 0.00 1348 reject_low 5 ALIGNMENT 0 YS2-12m11.p1k chr14 1022 1027 6502 6518 F 6 0.00 1300 reject_low 11 ALIGNMENT 795 YS2-12m11.p1k chr13 29 1021 4435 5421 F 993 94.66 1300 reject_low 18 ALIGNMENT 780 YS2-12m11.p1k chr06 29 1020 3597 4567 F 992 94.46 1300 reject_low 8 ALIGNMENT 20 YS2-12m11.p1k chr04 1080 1028 1525494 1525548 C 53 81.13 1300 reject_low 13 ALIGNMENT 0 YS2-12m11.p1k chr08 697 833 4952 4971 F 137 0.00 1300 reject_low 21 ALIGNMENT 20 YS2-12m11.p1k chr12 1080 1028 1071695 1071749 C 53 81.13 1300 reject_low 14 ALIGNMENT 0 YS2-12m11.q1k chr02 872 544 427691 427690 C 329 0.00 1348 reject_low 6 ALIGNMENT 20 YS2-12m11.p1k chr16 1028 1080 6428 6482 F 53 81.13 1300 reject_low 12 ALIGNMENT 809 YS2-12m11.p1k chr04 1021 29 1525566 1526553 C 993 95.07 1300 reject_low 13 ALIGNMENT 923 YS2-12m11.p1k chr10 29 1051 5881 6906 F 1023 97.56 1300 reject_low 3 ALIGNMENT 20 YS2-12m11.p1k chr12 1028 1080 11098 11152 F 53 81.13 1300 reject_low 17 ALIGNMENT 20 YS2-12m11.p1k chr15 1080 1028 1084659 1084713 C 53 81.13 1300 reject_low 15 ALIGNMENT 854 YS2-12m11.p1k chr07 1021 29 1084467 1085459 C 993 96.17 1300 reject_low 10 ALIGNMENT 20 YS2-12m11.p1k chr08 1080 1028 557030 557084 C 53 81.13 1300 reject_bad_break 0 ALIGNMENT 0 YS2-12m11.p1k chr02 1022 1027 5731 5747 F 6 0.00 1300 reject_low 20 ALIGNMENT 942 YS2-12m12.q1k chr12 27 1136 947574 948697 F 1110 95.95 1335 accept 0 ALIGNMENT 978 YS2-12m12.p1k chr12 1145 29 952459 953577 C 1117 96.51 1341 accept 0 ALIGNMENT 0 YS2-12m13.p1k chr02 107 625 40580 40579 F 519 0.00 1295 reject_low 5 ALIGNMENT 0 YS2-12m13.p1k chr02 661 940 40614 40613 F 280 0.00 1295 reject_low 5 ALIGNMENT 0 YS2-12m13.p1k chr15 940 666 355084 355083 C 275 0.00 1295 reject_low 4 ALIGNMENT 0 YS2-12m13.p1k chr13 940 666 239355 239354 C 275 0.00 1295 reject_low 2 ALIGNMENT 23 YS2-12m13.p1k chr13 665 626 239354 239393 C 40 97.50 1295 reject_low 2 ALIGNMENT 0 YS2-12m13.p1k chr13 625 107 239394 239393 C 519 0.00 1295 reject_low 2 ALIGNMENT 0 YS2-12m13.p1k chr02 661 940 646133 646132 F 280 0.00 1295 reject_low 1 ALIGNMENT 0 YS2-12m13.p1k chr04 627 107 323718 323717 C 521 0.00 1295 reject_low 3 ALIGNMENT 982 YS2-12m13.p1k chr07 1227 83 306605 307773 C 1145 96.51 1295 accept 0 ALIGNMENT 20 YS2-12m13.p1k chr15 665 631 355083 355117 C 35 100.00 1295 reject_low 4 ALIGNMENT 20 YS2-12m13.p1k chr04 667 628 323678 323717 C 40 95.00 1295 reject_low 3 ALIGNMENT 20 YS2-12m13.p1k chr02 626 660 40580 40614 F 35 97.14 1295 reject_low 5 ALIGNMENT 963 YS2-12m13.q1k chr07 36 1070 305802 306847 F 1035 98.36 1305 accept 0 ALIGNMENT 22 YS2-12m13.p1k chr02 621 660 646094 646133 F 40 95.00 1295 reject_low 1 ALIGNMENT 0 YS2-12m13.p1k chr02 107 620 646094 646093 F 514 0.00 1295 reject_low 1 ALIGNMENT 0 YS2-12m13.p1k chr15 630 107 355118 355117 C 524 0.00 1295 reject_low 4 ALIGNMENT 0 YS2-12m13.p1k chr04 940 668 323679 323678 C 273 0.00 1295 reject_low 3 ALIGNMENT 38 YS2-12m14.q1k vc_7 235 272 13525 13562 F 38 100.00 272 reject_low 7 ALIGNMENT 40 YS2-12m14.q1k vc_4 233 272 5832 5871 F 40 100.00 272 reject_low 5 ALIGNMENT 183 YS2-12m14.q1k chr15 232 38 843658 843852 C 195 100.00 272 accept_chi 1 ALIGNMENT 0 YS2-12m14.q1k vc_5 233 62 37 36 C 172 0.00 272 reject_low 8 ALIGNMENT 40 YS2-12m14.q1k vc_1 272 233 2472 2511 C 40 100.00 272 reject_low 2 ALIGNMENT 0 YS2-12m14.q1k vc_2 232 62 2145 2144 C 171 0.00 272 reject_low 3 ALIGNMENT 0 YS2-12m14.q1k vc_3 232 62 2512 2511 C 171 0.00 272 reject_low 4 ALIGNMENT 0 YS2-12m14.q1k vc_4 62 232 5832 5831 F 171 0.00 272 reject_low 5 ALIGNMENT 40 YS2-12m14.q1k vc_2 272 233 2105 2144 C 40 100.00 272 reject_low 3 ALIGNMENT 39 YS2-12m14.q1k vc_5 272 234 5025 5063 C 39 100.00 272 reject_low 6 ALIGNMENT 40 YS2-12m14.q1k vc_3 272 233 2472 2511 C 40 100.00 272 reject_low 4 ALIGNMENT 0 YS2-12m14.q1k vc_7 62 234 13525 13524 F 173 0.00 272 reject_low 7 ALIGNMENT 183 YS2-12m14.p1k chr15 30 224 843658 843852 F 195 100.00 242 accept_chi 0 ALIGNMENT 0 YS2-12m14.q1k chr15 272 233 843659 843658 C 40 0.00 272 accept_chi 1 ALIGNMENT 36 YS2-12m14.q1k vc_5 269 234 1 36 C 36 100.00 272 reject_low 8 ALIGNMENT 0 YS2-12m14.q1k vc_1 232 62 2512 2511 C 171 0.00 272 reject_low 2 ALIGNMENT 0 YS2-12m14.q1k vc_5 233 62 5064 5063 C 172 0.00 272 reject_low 6 ALIGNMENT 0 YS2-12m14.p1k chr15 225 242 843852 843851 F 18 0.00 242 accept_chi 0 ALIGNMENT 870 YS2-12m15.p1k chr12 34 1112 747086 748165 F 1079 95.18 1275 accept 0 ALIGNMENT 967 YS2-12m15.q1k chr12 1191 42 750274 751431 C 1150 97.39 1336 accept 0 ALIGNMENT 0 YS2-12m16.p1k chr08 480 62 326359 326358 C 419 0.00 1362 reject_low 1 ALIGNMENT 956 YS2-12m16.p1k chr04 1106 29 1183353 1184431 C 1078 96.75 1362 accept 0 ALIGNMENT 149 YS2-12m16.p1k chr08 976 481 325865 326358 C 496 77.02 1362 reject_low 1 ALIGNMENT 1022 YS2-12m16.q1k chr04 36 1235 1180005 1181215 F 1200 96.42 1392 accept 0 ALIGNMENT 0 YS2-12m17.p1k chr04 482 499 24389 24388 F 18 0.00 499 ambiguous_tel 1 ALIGNMENT 41 YS2-12m17.q1k vc_3 493 453 2472 2512 C 41 100.00 493 reject_low 4 ALIGNMENT 0 YS2-12m17.q1k vc_7 62 455 13525 13524 F 394 0.00 493 reject_low 7 ALIGNMENT 39 YS2-12m17.q1k vc_5 493 455 5025 5063 C 39 100.00 493 reject_low 6 ALIGNMENT 41 YS2-12m17.q1k vc_4 453 493 5831 5871 F 41 100.00 493 reject_low 5 ALIGNMENT 0 YS2-12m17.q1k vc_5 454 62 37 36 C 393 0.00 493 reject_low 8 ALIGNMENT 0 YS2-12m17.q1k vc_2 452 62 2146 2145 C 391 0.00 493 reject_low 3 ALIGNMENT 36 YS2-12m17.q1k vc_5 490 455 1 36 C 36 100.00 493 reject_low 8 ALIGNMENT 381 YS2-12m17.p1k chr04 72 481 23982 24389 F 410 98.78 499 ambiguous_tel 1 ALIGNMENT 38 YS2-12m17.q1k vc_7 456 493 13525 13562 F 38 100.00 493 reject_low 7 ALIGNMENT 0 YS2-12m17.q1k vc_5 454 62 5064 5063 C 393 0.00 493 reject_low 6 ALIGNMENT 0 YS2-12m17.q1k vc_1 452 62 2513 2512 C 391 0.00 493 reject_low 2 ALIGNMENT 0 YS2-12m17.q1k chr04 493 453 23974 23973 C 41 0.00 493 ambiguous_tel 0 ALIGNMENT 0 YS2-12m17.q1k vc_3 452 62 2513 2512 C 391 0.00 493 reject_low 4 ALIGNMENT 41 YS2-12m17.q1k vc_1 493 453 2472 2512 C 41 100.00 493 reject_low 2 ALIGNMENT 0 YS2-12m17.q1k vc_4 62 452 5831 5830 F 391 0.00 493 reject_low 5 ALIGNMENT 389 YS2-12m17.q1k chr04 452 38 23973 24388 C 415 98.80 493 ambiguous_tel 0 ALIGNMENT 41 YS2-12m17.q1k vc_2 493 453 2105 2145 C 41 100.00 493 reject_low 3 ALIGNMENT 219 YS2-12m18.p1k vc_4 911 1233 5871 6196 F 323 90.40 1311 reject_low 7 ALIGNMENT 37 YS2-12m18.q1k vc_1 937 901 2476 2512 C 37 100.00 1384 reject_low 16 ALIGNMENT 0 YS2-12m18.p1k vc_3 910 62 2106 2105 C 849 0.00 1311 reject_low 6 ALIGNMENT 0 YS2-12m18.p1k vc_5 910 62 5026 5025 C 849 0.00 1311 reject_low 2 ALIGNMENT 219 YS2-12m18.p1k vc_3 1233 911 1780 2105 C 323 90.40 1311 reject_low 6 ALIGNMENT 0 YS2-12m18.q1k vc_3 62 940 2531 2530 F 879 0.00 1384 reject_low 11 ALIGNMENT 0 YS2-12m18.p1k vc_7 62 910 100 99 F 849 0.00 1311 reject_low 3 ALIGNMENT 35 YS2-12m18.q1k vc_5 937 903 2 36 C 35 100.00 1384 reject_low 21 ALIGNMENT 0 YS2-12m18.q1k vc_7 940 62 2728 2727 C 879 0.00 1384 reject_low 3 ALIGNMENT 121 YS2-12m18.q1k vc_4 941 1103 6353 6514 F 163 92.64 1384 reject_low 14 ALIGNMENT 37 YS2-12m18.q1k vc_3 937 901 2476 2512 C 37 100.00 1384 reject_low 18 ALIGNMENT 219 YS2-12m18.p1k vc_2 1233 911 1780 2105 C 323 90.40 1311 reject_low 5 ALIGNMENT 0 YS2-12m18.p1k vc_2 910 62 2106 2105 C 849 0.00 1311 reject_low 5 ALIGNMENT 170 YS2-12m18.q1k vc_7 1223 941 2442 2727 C 283 88.34 1384 reject_low 3 ALIGNMENT 35 YS2-12m18.q1k vc_5 937 903 5029 5063 C 35 100.00 1384 reject_low 22 ALIGNMENT 823 YS2-12m18.q1k chr02 901 36 206217 207084 C 866 99.42 1384 accept_chi 1 ALIGNMENT 170 YS2-12m18.q1k vc_2 941 1223 2164 2449 F 283 88.34 1384 reject_low 10 ALIGNMENT 121 YS2-12m18.q1k vc_4 941 1103 126 287 F 163 92.64 1384 reject_low 13 ALIGNMENT 219 YS2-12m18.p1k vc_7 911 1233 100 425 F 323 90.40 1311 reject_low 3 ALIGNMENT 37 YS2-12m18.q1k vc_2 937 901 2109 2145 C 37 100.00 1384 reject_low 17 ALIGNMENT 37 YS2-12m18.q1k vc_4 901 937 5831 5867 F 37 100.00 1384 reject_low 14 ALIGNMENT 0 YS2-12m18.q1k vc_1 900 62 2513 2512 C 839 0.00 1384 reject_low 16 ALIGNMENT 0 YS2-12m18.q1k vc_4 940 62 1535 1534 C 879 0.00 1384 reject_low 15 ALIGNMENT 827 YS2-12m18.p1k chr02 27 893 206217 207085 F 867 99.54 1311 accept_chi 0 ALIGNMENT 170 YS2-12m18.q1k vc_3 941 1223 2531 2816 F 283 88.34 1384 reject_low 11 ALIGNMENT 0 YS2-12m18.p1k vc_7 62 910 13562 13561 F 849 0.00 1311 reject_low 8 ALIGNMENT 165 YS2-12m18.q1k vc_4 1223 941 5525 5812 C 283 87.99 1384 reject_low 12 ALIGNMENT 170 YS2-12m18.q1k vc_1 941 1223 2531 2816 F 283 88.34 1384 reject_low 9 ALIGNMENT 0 YS2-12m18.q1k vc_4 62 900 5831 5830 F 839 0.00 1384 reject_low 14 ALIGNMENT 0 YS2-12m18.q1k vc_2 62 940 2164 2163 F 879 0.00 1384 reject_low 10 ALIGNMENT 219 YS2-12m18.p1k vc_5 1233 911 4700 5025 C 323 90.40 1311 reject_low 2 ALIGNMENT 0 YS2-12m18.q1k vc_5 62 940 2398 2397 F 879 0.00 1384 reject_low 2 ALIGNMENT 0 YS2-12m18.q1k vc_1 62 940 2531 2530 F 879 0.00 1384 reject_low 9 ALIGNMENT 0 YS2-12m18.q1k vc_2 900 62 2146 2145 C 839 0.00 1384 reject_low 17 ALIGNMENT 26 YS2-12m18.p1k vc_3 941 911 2441 2472 C 31 96.77 1311 reject_low 20 ALIGNMENT 0 YS2-12m18.q1k vc_5 902 62 37 36 C 841 0.00 1384 reject_low 21 ALIGNMENT 219 YS2-12m18.p1k vc_1 1233 911 1780 2105 C 323 90.40 1311 reject_low 4 ALIGNMENT 170 YS2-12m18.q1k vc_5 941 1223 2398 2683 F 283 88.34 1384 reject_low 2 ALIGNMENT 0 YS2-12m18.p1k vc_4 62 910 5871 5870 F 849 0.00 1311 reject_low 7 ALIGNMENT 0 YS2-12m18.q1k vc_7 62 903 13525 13524 F 842 0.00 1384 reject_low 23 ALIGNMENT 0 YS2-12m18.p1k vc_3 910 62 2473 2472 C 849 0.00 1311 reject_low 20 ALIGNMENT 0 YS2-12m18.q1k vc_4 940 62 5813 5812 C 879 0.00 1384 reject_low 12 ALIGNMENT 81 YS2-12m18.q1k vc_4 1029 941 1446 1534 C 89 96.63 1384 reject_low 15 ALIGNMENT 26 YS2-12m18.p1k vc_1 941 911 2441 2472 C 31 96.77 1311 reject_low 19 ALIGNMENT 0 YS2-12m18.q1k vc_5 902 62 5064 5063 C 841 0.00 1384 reject_low 22 ALIGNMENT 0 YS2-12m18.q1k vc_4 62 940 126 125 F 879 0.00 1384 reject_low 13 ALIGNMENT 0 YS2-12m18.q1k vc_4 938 940 5868 6352 F 3 0.00 1384 reject_low 14 ALIGNMENT 0 YS2-12m18.q1k vc_3 900 62 2513 2512 C 839 0.00 1384 reject_low 18 ALIGNMENT 0 YS2-12m18.p1k vc_1 910 62 2106 2105 C 849 0.00 1311 reject_low 4 ALIGNMENT 34 YS2-12m18.q1k vc_7 904 937 13525 13558 F 34 100.00 1384 reject_low 23 ALIGNMENT 219 YS2-12m18.p1k vc_7 911 1233 13562 13887 F 323 90.40 1311 reject_low 8 ALIGNMENT 0 YS2-12m18.p1k vc_1 910 62 2473 2472 C 849 0.00 1311 reject_low 19 ALIGNMENT 0 YS2-12m19.q1k vc_7 62 602 13525 13524 F 541 0.00 640 reject_low 7 ALIGNMENT 0 YS2-12m19.q1k vc_2 600 62 2145 2144 C 539 0.00 640 reject_low 3 ALIGNMENT 0 YS2-12m19.q1k vc_5 601 62 5064 5063 C 540 0.00 640 reject_low 6 ALIGNMENT 40 YS2-12m19.q1k vc_1 640 601 2472 2511 C 40 100.00 640 reject_low 2 ALIGNMENT 38 YS2-12m19.q1k vc_7 603 640 13525 13562 F 38 100.00 640 reject_low 7 ALIGNMENT 0 YS2-12m19.q1k vc_3 600 62 2512 2511 C 539 0.00 640 reject_low 4 ALIGNMENT 40 YS2-12m19.q1k vc_3 640 601 2472 2511 C 40 100.00 640 reject_low 4 ALIGNMENT 0 YS2-12m19.p1k chr15 643 625 388665 388664 C 19 0.00 643 accept_chi 1 ALIGNMENT 40 YS2-12m19.q1k vc_4 601 640 5832 5871 F 40 100.00 640 reject_low 5 ALIGNMENT 0 YS2-12m19.q1k vc_5 601 62 37 36 C 540 0.00 640 reject_low 8 ALIGNMENT 0 YS2-12m19.q1k vc_4 62 600 5832 5831 F 539 0.00 640 reject_low 5 ALIGNMENT 0 YS2-12m19.q1k chr15 601 640 389224 389223 F 40 0.00 640 accept_chi 0 ALIGNMENT 39 YS2-12m19.q1k vc_5 640 602 5025 5063 C 39 100.00 640 reject_low 6 ALIGNMENT 523 YS2-12m19.q1k chr15 39 600 388664 389224 F 562 98.40 640 accept_chi 0 ALIGNMENT 36 YS2-12m19.q1k vc_5 637 602 1 36 C 36 100.00 640 reject_low 8 ALIGNMENT 40 YS2-12m19.q1k vc_2 640 601 2105 2144 C 40 100.00 640 reject_low 3 ALIGNMENT 0 YS2-12m19.q1k vc_1 600 62 2512 2511 C 539 0.00 640 reject_low 2 ALIGNMENT 520 YS2-12m19.p1k chr15 624 65 388664 389224 C 560 98.21 643 accept_chi 1 ALIGNMENT 177 YS2-12m23.p1k vc_4 808 1053 5871 6114 F 246 91.46 1191 reject_low 5 ALIGNMENT 0 YS2-12m23.q1k vc_5 794 62 5064 5063 C 733 0.00 833 reject_low 14 ALIGNMENT 0 YS2-12m23.p1k vc_3 807 92 2106 2105 C 716 0.00 1191 reject_low 4 ALIGNMENT 0 YS2-12m23.q1k vc_7 62 795 13525 13524 F 734 0.00 833 reject_low 16 ALIGNMENT 177 YS2-12m23.p1k vc_7 808 1053 13562 13805 F 246 91.46 1191 reject_low 8 ALIGNMENT 36 YS2-12m23.q1k vc_5 830 795 1 36 C 36 100.00 833 reject_low 17 ALIGNMENT 177 YS2-12m23.p1k vc_5 1053 808 4782 5025 C 246 91.46 1191 reject_low 6 ALIGNMENT 28 YS2-12m23.p1k vc_1 841 808 2438 2472 C 34 94.12 1191 reject_low 9 ALIGNMENT 0 YS2-12m23.p1k vc_3 807 92 2473 2472 C 716 0.00 1191 reject_low 10 ALIGNMENT 177 YS2-12m23.p1k vc_2 1053 808 1862 2105 C 246 91.46 1191 reject_low 3 ALIGNMENT 38 YS2-12m23.q1k vc_7 796 833 13525 13562 F 38 100.00 833 reject_low 16 ALIGNMENT 0 YS2-12m23.q1k vc_4 62 792 5831 5830 F 731 0.00 833 reject_low 13 ALIGNMENT 0 YS2-12m23.q1k vc_3 792 62 2513 2512 C 731 0.00 833 reject_low 12 ALIGNMENT 41 YS2-12m23.q1k vc_4 793 833 5831 5871 F 41 100.00 833 reject_low 13 ALIGNMENT 41 YS2-12m23.q1k vc_1 833 793 2472 2512 C 41 100.00 833 reject_low 11 ALIGNMENT 0 YS2-12m23.p1k vc_4 92 807 5871 5870 F 716 0.00 1191 reject_low 5 ALIGNMENT 177 YS2-12m23.p1k vc_1 1053 808 1862 2105 C 246 91.46 1191 reject_low 2 ALIGNMENT 41 YS2-12m23.q1k vc_3 833 793 2472 2512 C 41 100.00 833 reject_low 12 ALIGNMENT 0 YS2-12m23.q1k chr05 833 793 271226 271225 C 41 0.00 833 accept_chi 0 ALIGNMENT 0 YS2-12m23.p1k vc_1 807 92 2106 2105 C 716 0.00 1191 reject_low 2 ALIGNMENT 38 YS2-12m23.q1k vc_7 796 833 63 100 F 38 100.00 833 reject_low 15 ALIGNMENT 721 YS2-12m23.q1k chr05 792 27 271225 271991 C 766 98.69 833 accept_chi 0 ALIGNMENT 0 YS2-12m23.q1k vc_1 792 62 2513 2512 C 731 0.00 833 reject_low 11 ALIGNMENT 0 YS2-12m23.p1k vc_5 807 92 5026 5025 C 716 0.00 1191 reject_low 6 ALIGNMENT 0 YS2-12m23.p1k chr05 792 847 271991 271990 F 56 0.00 1191 accept_chi 1 ALIGNMENT 0 YS2-12m23.p1k vc_2 807 92 2106 2105 C 716 0.00 1191 reject_low 3 ALIGNMENT 0 YS2-12m23.p1k vc_1 807 92 2473 2472 C 716 0.00 1191 reject_low 9 ALIGNMENT 0 YS2-12m23.p1k vc_7 92 807 13562 13561 F 716 0.00 1191 reject_low 8 ALIGNMENT 0 YS2-12m23.q1k vc_7 62 795 63 62 F 734 0.00 833 reject_low 15 ALIGNMENT 692 YS2-12m23.p1k chr05 35 791 271235 271991 F 757 97.62 1191 accept_chi 1 ALIGNMENT 0 YS2-12m23.q1k vc_5 794 62 37 36 C 733 0.00 833 reject_low 17 ALIGNMENT 177 YS2-12m23.p1k vc_3 1053 808 1862 2105 C 246 91.46 1191 reject_low 4 ALIGNMENT 0 YS2-12m23.p1k vc_7 92 807 100 99 F 716 0.00 1191 reject_low 7 ALIGNMENT 39 YS2-12m23.q1k vc_5 833 795 5025 5063 C 39 100.00 833 reject_low 14 ALIGNMENT 28 YS2-12m23.p1k vc_3 841 808 2438 2472 C 34 94.12 1191 reject_low 10 ALIGNMENT 177 YS2-12m23.p1k vc_7 808 1053 100 343 F 246 91.46 1191 reject_low 7 ALIGNMENT 40 YS2-12m24.q1k vc_1 289 250 2472 2511 C 40 100.00 289 reject_low 3 ALIGNMENT 0 YS2-12m24.q1k vc_7 62 251 13525 13524 F 190 0.00 289 reject_low 7 ALIGNMENT 36 YS2-12m24.q1k vc_5 286 251 1 36 C 36 100.00 289 reject_low 8 ALIGNMENT 217 YS2-12m24.p1k chr12 28 249 465043 465265 F 222 99.55 266 reject_low 2 ALIGNMENT 222 YS2-12m24.q1k chr12 249 27 465043 465265 C 223 100.00 289 accept 0 ALIGNMENT 40 YS2-12m24.q1k vc_3 289 250 2472 2511 C 40 100.00 289 reject_low 4 ALIGNMENT 0 YS2-12m24.q1k vc_5 250 62 37 36 C 189 0.00 289 reject_low 8 ALIGNMENT 0 YS2-12m24.q1k vc_4 62 249 5832 5831 F 188 0.00 289 reject_low 5 ALIGNMENT 38 YS2-12m24.q1k vc_7 252 289 13525 13562 F 38 100.00 289 reject_low 7 ALIGNMENT 0 YS2-12m24.q1k chr12 289 250 455907 455906 C 40 0.00 289 reject_low 1 ALIGNMENT 0 YS2-12m24.q1k vc_1 249 62 2512 2511 C 188 0.00 289 reject_low 3 ALIGNMENT 0 YS2-12m24.q1k chr12 289 250 465044 465043 C 40 0.00 289 accept 0 ALIGNMENT 0 YS2-12m24.q1k vc_3 249 62 2512 2511 C 188 0.00 289 reject_low 4 ALIGNMENT 39 YS2-12m24.q1k vc_5 289 251 5025 5063 C 39 100.00 289 reject_low 6 ALIGNMENT 222 YS2-12m24.q1k chr12 249 27 455906 456128 C 223 100.00 289 reject_low 1 ALIGNMENT 40 YS2-12m24.q1k vc_4 250 289 5832 5871 F 40 100.00 289 reject_low 5 ALIGNMENT 217 YS2-12m24.p1k chr12 28 249 455906 456128 F 222 99.55 266 accept 0 ALIGNMENT 0 YS2-12m24.p1k chr12 250 266 465265 465264 F 17 0.00 266 reject_low 2 ALIGNMENT 0 YS2-12m24.p1k chr12 250 266 456128 456127 F 17 0.00 266 accept 0 ALIGNMENT 0 YS2-12m24.q1k vc_5 250 62 5064 5063 C 189 0.00 289 reject_low 6 ALIGNMENT 951 YS2-12n01.p1k chr15 28 1088 731757 732833 F 1061 97.83 1251 accept 0 ALIGNMENT 986 YS2-12n01.q1k chr15 1185 39 732061 733232 C 1147 96.95 1333 accept 0 ALIGNMENT 920 YS2-12n03.q1k chr04 1135 40 787873 788983 C 1096 96.17 1336 accept 0 ALIGNMENT 758 YS2-12n03.p1k chr04 32 1000 784261 785240 F 969 94.43 1288 accept 0 ALIGNMENT 903 YS2-12n04.p1k chr04 29 1030 847028 848036 F 1002 98.10 1312 accept 0 ALIGNMENT 1020 YS2-12n04.q1k chr04 1154 37 848096 849224 C 1118 98.21 1330 accept 0 ALIGNMENT 0 YS2-12n05.p1k vc_3 920 92 2106 2105 C 829 0.00 1320 reject_low 4 ALIGNMENT 0 YS2-12n05.p1k vc_7 92 920 13562 13561 F 829 0.00 1320 reject_low 8 ALIGNMENT 0 YS2-12n05.p1k vc_7 92 920 100 99 F 829 0.00 1320 reject_low 7 ALIGNMENT 0 YS2-12n05.p1k vc_1 920 92 2473 2472 C 829 0.00 1320 reject_low 9 ALIGNMENT 0 YS2-12n05.p1k vc_1 920 92 2106 2105 C 829 0.00 1320 reject_low 2 ALIGNMENT 0 YS2-12n05.p1k vc_5 920 92 5026 5025 C 829 0.00 1320 reject_low 6 ALIGNMENT 0 YS2-12n05.p1k vc_3 920 92 2473 2472 C 829 0.00 1320 reject_low 10 ALIGNMENT 153 YS2-12n05.p1k vc_1 1177 921 1831 2105 C 257 88.72 1320 reject_low 2 ALIGNMENT 26 YS2-12n05.p1k vc_3 951 921 2441 2472 C 31 96.77 1320 reject_low 10 ALIGNMENT 0 YS2-12n05.p1k vc_4 92 920 5871 5870 F 829 0.00 1320 reject_low 5 ALIGNMENT 0 YS2-12n05.p1k vc_2 920 92 2106 2105 C 829 0.00 1320 reject_low 3 ALIGNMENT 804 YS2-12n05.q1k chr16 907 39 770524 771393 C 869 98.96 908 accept_chi 0 ALIGNMENT 791 YS2-12n05.p1k chr16 34 903 770524 771393 F 870 98.51 1320 accept_chi 1 ALIGNMENT 26 YS2-12n05.p1k vc_1 951 921 2441 2472 C 31 96.77 1320 reject_low 9 ALIGNMENT 153 YS2-12n05.p1k vc_4 921 1177 5871 6145 F 257 88.72 1320 reject_low 5 ALIGNMENT 153 YS2-12n05.p1k vc_7 921 1177 13562 13836 F 257 88.72 1320 reject_low 8 ALIGNMENT 153 YS2-12n05.p1k vc_3 1177 921 1831 2105 C 257 88.72 1320 reject_low 4 ALIGNMENT 153 YS2-12n05.p1k vc_2 1177 921 1831 2105 C 257 88.72 1320 reject_low 3 ALIGNMENT 153 YS2-12n05.p1k vc_5 1177 921 4751 5025 C 257 88.72 1320 reject_low 6 ALIGNMENT 153 YS2-12n05.p1k vc_7 921 1177 100 374 F 257 88.72 1320 reject_low 7 ALIGNMENT 971 YS2-12n06.q1k chr02 1086 30 679282 680344 C 1057 98.39 1339 accept 0 ALIGNMENT 906 YS2-12n06.p1k chr02 29 1084 676023 677085 F 1056 96.21 1327 accept 0 ALIGNMENT 36 YS2-12n07.p1k chr11 83 40 162485 162530 C 44 95.45 1254 reject_low 1 ALIGNMENT 0 YS2-12n07.p1k chr07 83 813 736422 736421 F 731 0.00 1254 reject_low 2 ALIGNMENT 32 YS2-12n07.p1k chr07 40 82 736378 736422 F 43 93.02 1254 reject_low 2 ALIGNMENT 0 YS2-12n07.p1k chr11 813 84 162486 162485 C 730 0.00 1254 reject_low 1 ALIGNMENT 879 YS2-12n07.p1k chr13 1084 40 746875 747929 C 1045 95.69 1254 accept 0 ALIGNMENT 1050 YS2-12n07.q1k chr13 38 1219 742062 743256 F 1182 97.21 1388 accept 0 ALIGNMENT 987 YS2-12n08.q1k chr09 38 1146 74331 75448 F 1109 97.11 1362 accept 0 ALIGNMENT 887 YS2-12n08.p1k chr09 1037 24 74683 75711 C 1014 96.35 1332 accept 0 ALIGNMENT 1032 YS2-12n09.q1k chr12 1179 39 159717 160867 C 1141 97.81 1359 accept_chi 0 ALIGNMENT 801 YS2-12n09.p1k chr16 24 988 215107 216087 F 965 95.85 1229 accept_chi 1 ALIGNMENT 969 YS2-12n10.q1k chr07 1148 39 214940 216067 C 1110 96.85 1338 accept 0 ALIGNMENT 909 YS2-12n10.p1k chr07 31 1090 210942 212012 F 1060 95.94 1355 accept 0 ALIGNMENT 996 YS2-12n12.p1k chr10 1137 26 137739 138847 C 1112 97.03 1351 accept 0 ALIGNMENT 997 YS2-12n12.q1k chr10 39 1165 136235 137374 F 1127 96.81 1378 accept 0 ALIGNMENT 915 YS2-12n13.q1k chr12 36 1056 556765 557797 F 1021 97.45 1345 accept 0 ALIGNMENT 985 YS2-12n13.p1k chr12 1125 29 558685 559803 C 1097 97.72 1289 accept 0 ALIGNMENT 975 YS2-12n14.p1k chr13 1134 25 595622 596729 C 1110 96.85 1343 accept 0 ALIGNMENT 932 YS2-12n14.q1k chr13 39 1077 594423 595476 F 1039 97.69 1315 accept 0 ALIGNMENT 928 YS2-12n15.p1k chr04 1133 30 254740 255845 C 1104 95.74 1347 accept 0 ALIGNMENT 958 YS2-12n15.q1k chr04 31 1129 251649 252759 F 1099 96.63 1328 accept 0 ALIGNMENT 922 YS2-12n16.p1k chr10 1145 36 603537 604652 C 1110 94.59 1382 accept 0 ALIGNMENT 909 YS2-12n16.q1k chr10 38 1104 599946 601023 F 1067 96.16 1337 accept 0 ALIGNMENT 936 YS2-12n17.p1k chr11 1146 31 257595 258722 C 1116 95.16 1312 accept 0 ALIGNMENT 938 YS2-12n17.q1k chr11 31 1114 254322 255425 F 1084 96.77 1297 accept 0 ALIGNMENT 1021 YS2-12n18.p1k chr13 32 1314 263974 265251 F 1283 95.01 1347 accept 0 ALIGNMENT 914 YS2-12n18.q1k chr13 1084 39 268843 269907 C 1046 97.23 1339 accept 0 ALIGNMENT 926 YS2-12n19.q1k chr15 40 999 962557 963516 F 960 99.06 1319 accept 0 ALIGNMENT 552 YS2-12n19.p1k chr15 981 36 968265 969187 C 946 88.48 1368 accept 0 ALIGNMENT 0 YS2-12n20.q1k chr02 851 689 477666 477665 C 163 0.00 1306 reject_low 1 ALIGNMENT 646 YS2-12n20.q1k chr02 688 34 477665 478320 C 655 99.85 1306 reject_low 1 ALIGNMENT 1044 YS2-12n20.p1k chr16 37 1261 694933 696160 F 1225 95.35 1309 accept 0 ALIGNMENT 943 YS2-12n20.q1k chr16 1073 34 700195 701247 C 1040 97.88 1306 accept 0 ALIGNMENT 396 YS2-12n21.p1k chr13 193 1009 31576 32384 F 817 84.94 1257 accept 0 ALIGNMENT 0 YS2-12n23.q1k vc_5 250 62 37 36 C 189 0.00 289 reject_low 8 ALIGNMENT 217 YS2-12n23.p1k chr12 27 248 455906 456128 F 222 99.55 265 accept 0 ALIGNMENT 40 YS2-12n23.q1k vc_1 289 250 2472 2511 C 40 100.00 289 reject_low 3 ALIGNMENT 0 YS2-12n23.p1k chr12 249 265 465265 465264 F 17 0.00 265 reject_low 2 ALIGNMENT 217 YS2-12n23.p1k chr12 27 248 465043 465265 F 222 99.55 265 reject_low 2 ALIGNMENT 0 YS2-12n23.q1k vc_1 249 62 2512 2511 C 188 0.00 289 reject_low 3 ALIGNMENT 0 YS2-12n23.q1k vc_5 250 62 5064 5063 C 189 0.00 289 reject_low 6 ALIGNMENT 40 YS2-12n23.q1k vc_4 250 289 5832 5871 F 40 100.00 289 reject_low 5 ALIGNMENT 0 YS2-12n23.q1k vc_7 62 251 13525 13524 F 190 0.00 289 reject_low 7 ALIGNMENT 0 YS2-12n23.q1k vc_3 249 62 2512 2511 C 188 0.00 289 reject_low 4 ALIGNMENT 0 YS2-12n23.p1k chr12 249 265 456128 456127 F 17 0.00 265 accept 0 ALIGNMENT 36 YS2-12n23.q1k vc_5 286 251 1 36 C 36 100.00 289 reject_low 8 ALIGNMENT 39 YS2-12n23.q1k vc_5 289 251 5025 5063 C 39 100.00 289 reject_low 6 ALIGNMENT 0 YS2-12n23.q1k vc_4 62 249 5832 5831 F 188 0.00 289 reject_low 5 ALIGNMENT 40 YS2-12n23.q1k vc_3 289 250 2472 2511 C 40 100.00 289 reject_low 4 ALIGNMENT 38 YS2-12n23.q1k vc_7 252 289 13525 13562 F 38 100.00 289 reject_low 7 ALIGNMENT 0 YS2-12n23.q1k chr12 289 250 465044 465043 C 40 0.00 289 accept 0 ALIGNMENT 0 YS2-12n23.q1k chr12 289 250 455907 455906 C 40 0.00 289 reject_low 1 ALIGNMENT 217 YS2-12n23.q1k chr12 249 28 455906 456128 C 222 99.55 289 reject_low 1 ALIGNMENT 217 YS2-12n23.q1k chr12 249 28 465043 465265 C 222 99.55 289 accept 0 ALIGNMENT 973 YS2-12n24.q1k chr04 1197 30 1358219 1359401 C 1168 95.55 1320 accept 0 ALIGNMENT 1030 YS2-12n24.p1k chr04 30 1209 1355272 1356450 F 1180 96.44 1241 accept 0 ALIGNMENT 1053 YS2-12o01.q1k chr04 41 1264 963285 964524 F 1224 96.49 1270 accept 0 ALIGNMENT 827 YS2-12o01.p1k chr04 988 49 966937 967890 C 940 97.87 1241 accept 0 ALIGNMENT 951 YS2-12o05.p1k chr03 58 1104 63404 64455 F 1047 97.04 1357 accept_chi 0 ALIGNMENT 925 YS2-12o05.q1k chr03 1090 39 63404 64459 C 1052 96.67 1282 accept_chi 1 ALIGNMENT 391 YS2-12o06.p1k chr13 37 496 873884 874343 F 460 95.00 502 reject_low 1 ALIGNMENT 435 YS2-12o06.p1k chr15 38 502 160142 160606 F 465 97.85 502 accept 0 ALIGNMENT 976 YS2-12o06.q1k chr15 1205 31 163024 164218 C 1175 95.23 1340 accept 0 ALIGNMENT 989 YS2-12o07.q1k chr13 1143 36 15244 16364 C 1108 97.29 1288 accept 0 ALIGNMENT 851 YS2-12o07.p1k chr13 36 1102 12944 14023 F 1067 95.13 1304 accept 0 ALIGNMENT 468 YS2-12o09.p1k chr02 125 922 759467 760262 F 798 86.59 1347 accept 0 ALIGNMENT 0 YS2-12o10.p1k chr04 445 462 24389 24388 F 18 0.00 462 ambiguous_tel 1 ALIGNMENT 0 YS2-12o10.q1k vc_5 453 62 5064 5063 C 392 0.00 492 reject_low 6 ALIGNMENT 0 YS2-12o10.q1k vc_1 451 62 2513 2512 C 390 0.00 492 reject_low 2 ALIGNMENT 41 YS2-12o10.q1k vc_4 452 492 5831 5871 F 41 100.00 492 reject_low 5 ALIGNMENT 38 YS2-12o10.q1k vc_7 455 492 13525 13562 F 38 100.00 492 reject_low 7 ALIGNMENT 0 YS2-12o10.q1k chr04 492 452 23974 23973 C 41 0.00 492 ambiguous_tel 0 ALIGNMENT 36 YS2-12o10.q1k vc_5 489 454 1 36 C 36 100.00 492 reject_low 8 ALIGNMENT 41 YS2-12o10.q1k vc_2 492 452 2105 2145 C 41 100.00 492 reject_low 3 ALIGNMENT 389 YS2-12o10.p1k chr04 28 444 23973 24389 F 417 98.80 462 ambiguous_tel 1 ALIGNMENT 41 YS2-12o10.q1k vc_1 492 452 2472 2512 C 41 100.00 492 reject_low 2 ALIGNMENT 0 YS2-12o10.q1k vc_7 62 454 13525 13524 F 393 0.00 492 reject_low 7 ALIGNMENT 0 YS2-12o10.q1k vc_3 451 62 2513 2512 C 390 0.00 492 reject_low 4 ALIGNMENT 0 YS2-12o10.q1k vc_2 451 62 2146 2145 C 390 0.00 492 reject_low 3 ALIGNMENT 0 YS2-12o10.q1k vc_4 62 451 5831 5830 F 390 0.00 492 reject_low 5 ALIGNMENT 397 YS2-12o10.q1k chr04 451 36 23973 24388 C 416 99.28 492 ambiguous_tel 0 ALIGNMENT 0 YS2-12o10.q1k vc_5 453 62 37 36 C 392 0.00 492 reject_low 8 ALIGNMENT 39 YS2-12o10.q1k vc_5 492 454 5025 5063 C 39 100.00 492 reject_low 6 ALIGNMENT 41 YS2-12o10.q1k vc_3 492 452 2472 2512 C 41 100.00 492 reject_low 4 ALIGNMENT 1022 YS2-12o11.q1k chr02 1279 30 764494 765740 C 1250 95.20 1356 accept 0 ALIGNMENT 707 YS2-12o11.p1k chr02 31 1018 759402 760364 F 988 92.91 1330 accept 0 ALIGNMENT 0 YS2-12o12.q1k vc_4 62 216 5830 5829 F 155 0.00 258 reject_low 4 ALIGNMENT 0 YS2-12o12.q1k vc_3 216 62 2514 2513 C 155 0.00 258 reject_low 3 ALIGNMENT 42 YS2-12o12.q1k vc_1 258 217 2472 2513 C 42 100.00 258 reject_low 2 ALIGNMENT 0 YS2-12o12.q1k chr12 258 218 852126 852125 C 41 0.00 258 accept_chi 0 ALIGNMENT 0 YS2-12o12.q1k vc_5 219 62 5064 5063 C 158 0.00 258 reject_low 5 ALIGNMENT 179 YS2-12o12.q1k chr12 217 28 852125 852315 C 190 99.47 258 accept_chi 0 ALIGNMENT 38 YS2-12o12.q1k vc_7 221 258 13525 13562 F 38 100.00 258 reject_low 6 ALIGNMENT 42 YS2-12o12.q1k vc_4 217 258 5830 5871 F 42 100.00 258 reject_low 4 ALIGNMENT 42 YS2-12o12.q1k vc_3 258 217 2472 2513 C 42 100.00 258 reject_low 3 ALIGNMENT 0 YS2-12o12.q1k vc_1 216 62 2514 2513 C 155 0.00 258 reject_low 2 ALIGNMENT 0 YS2-12o12.p1k chr12 222 238 852315 852314 F 17 0.00 238 accept_chi 1 ALIGNMENT 0 YS2-12o12.q1k vc_7 62 220 13525 13524 F 159 0.00 258 reject_low 6 ALIGNMENT 175 YS2-12o12.p1k chr12 33 221 852125 852315 F 189 98.94 238 accept_chi 1 ALIGNMENT 36 YS2-12o12.q1k vc_5 255 220 1 36 C 36 100.00 258 reject_low 7 ALIGNMENT 39 YS2-12o12.q1k vc_5 258 220 5025 5063 C 39 100.00 258 reject_low 5 ALIGNMENT 0 YS2-12o12.q1k vc_5 219 62 37 36 C 158 0.00 258 reject_low 7 ALIGNMENT 1045 YS2-12o14.q1k chr11 35 1267 374147 375386 F 1233 96.03 1360 accept 0 ALIGNMENT 895 YS2-12o14.p1k chr11 1063 29 375594 376644 C 1035 97.00 1264 accept 0 ALIGNMENT 344 YS2-12o18.q1k chr02 391 36 455360 455715 C 356 99.72 430 accept_chi 0 ALIGNMENT 40 YS2-12o18.q1k vc_1 430 391 2472 2511 C 40 100.00 430 reject_low 2 ALIGNMENT 0 YS2-12o18.q1k vc_1 390 62 2512 2511 C 329 0.00 430 reject_low 2 ALIGNMENT 40 YS2-12o18.q1k vc_3 430 391 2472 2511 C 40 100.00 430 reject_low 4 ALIGNMENT 0 YS2-12o18.q1k vc_3 390 62 2512 2511 C 329 0.00 430 reject_low 4 ALIGNMENT 0 YS2-12o18.q1k vc_7 62 392 13525 13524 F 331 0.00 430 reject_low 7 ALIGNMENT 0 YS2-12o18.q1k vc_2 390 62 2145 2144 C 329 0.00 430 reject_low 3 ALIGNMENT 0 YS2-12o18.q1k vc_4 62 390 5832 5831 F 329 0.00 430 reject_low 5 ALIGNMENT 0 YS2-12o18.q1k vc_5 391 62 37 36 C 330 0.00 430 reject_low 8 ALIGNMENT 38 YS2-12o18.q1k vc_7 393 430 13525 13562 F 38 100.00 430 reject_low 7 ALIGNMENT 39 YS2-12o18.q1k vc_5 430 392 5025 5063 C 39 100.00 430 reject_low 6 ALIGNMENT 40 YS2-12o18.q1k vc_2 430 391 2105 2144 C 40 100.00 430 reject_low 3 ALIGNMENT 0 YS2-12o18.p1k chr02 381 398 455715 455714 F 18 0.00 398 accept_chi 1 ALIGNMENT 342 YS2-12o18.p1k chr02 27 380 455362 455715 F 354 99.72 398 accept_chi 1 ALIGNMENT 0 YS2-12o18.q1k chr02 430 392 455361 455360 C 39 0.00 430 accept_chi 0 ALIGNMENT 0 YS2-12o18.q1k vc_5 391 62 5064 5063 C 330 0.00 430 reject_low 6 ALIGNMENT 36 YS2-12o18.q1k vc_5 427 392 1 36 C 36 100.00 430 reject_low 8 ALIGNMENT 40 YS2-12o18.q1k vc_4 391 430 5832 5871 F 40 100.00 430 reject_low 5 ALIGNMENT 938 YS2-12o19.p1k chr07 1151 33 293212 294320 C 1119 95.53 1277 accept 0 ALIGNMENT 517 YS2-12o19.q1k chr07 28 863 289220 290049 F 836 88.88 1356 accept 0 ALIGNMENT 968 YS2-12o20.p1k chr13 1171 30 451381 452528 C 1142 95.71 1300 accept 0 ALIGNMENT 1026 YS2-12o20.q1k chr13 29 1229 450522 451737 F 1201 96.42 1345 accept 0 ALIGNMENT 930 YS2-12o21.q1k chr08 34 1179 87671 88824 F 1146 95.38 1258 reject_low 2 ALIGNMENT 874 YS2-12o21.p1k chr16 39 1129 437394 438485 F 1091 95.51 1214 reject_low 1 ALIGNMENT 930 YS2-12o21.q1k chr16 1179 34 439821 440974 C 1146 95.38 1258 reject_low 1 ALIGNMENT 957 YS2-12o21.q1k chr10 34 1179 199603 200756 F 1146 96.16 1258 accept_trans 0 ALIGNMENT 874 YS2-12o21.p1k chr08 1129 40 90159 91248 C 1090 95.50 1214 reject_low 2 ALIGNMENT 886 YS2-12o21.p1k chr10 1129 40 202091 203180 C 1090 95.87 1214 accept_trans 0 ALIGNMENT 942 YS2-12o23.q1k chr07 1095 40 597233 598299 C 1056 96.88 1215 accept 0 ALIGNMENT 981 YS2-12o23.p1k chr07 31 1160 593896 595024 F 1130 96.46 1172 accept 0 ALIGNMENT 1004 YS2-12o24.p1k chr03 1207 30 277931 279103 C 1178 96.60 1214 accept 0 ALIGNMENT 1049 YS2-12o24.q1k chr03 35 1293 276768 278022 F 1259 96.35 1307 accept 0 ALIGNMENT 327 YS2-12p01.p1k chr07 992 155 914928 915750 C 838 81.74 1356 accept 0 ALIGNMENT 0 YS2-12p04.p1k chr06 62 618 202738 202737 F 557 0.00 1264 reject_low 1 ALIGNMENT 1003 YS2-12p04.p1k chr08 30 1200 137103 138295 F 1171 96.07 1264 accept 0 ALIGNMENT 0 YS2-12p04.p1k chr08 849 796 137847 137846 C 54 0.00 1264 reject_low 2 ALIGNMENT 1068 YS2-12p04.q1k chr08 1255 32 140764 141994 C 1224 96.41 1369 accept 0 ALIGNMENT 22 YS2-12p04.p1k chr08 795 774 137846 137867 C 22 100.00 1264 reject_low 2 ALIGNMENT 136 YS2-12p04.p1k chr06 619 1029 202738 203153 F 411 78.35 1264 reject_low 1 ALIGNMENT 0 YS2-12p04.p1k chr08 773 62 137868 137867 C 712 0.00 1264 reject_low 2 ALIGNMENT 429 YS2-12p05.p1k chr15 43 507 160142 160606 F 465 97.42 507 accept 0 ALIGNMENT 1039 YS2-12p05.q1k chr15 1276 31 162959 164218 C 1246 95.10 1380 accept 0 ALIGNMENT 385 YS2-12p05.p1k chr13 42 501 873884 874343 F 460 94.57 507 reject_low 1 ALIGNMENT 0 YS2-12p06.q1k vc_1 506 62 2512 2511 C 445 0.00 546 reject_low 2 ALIGNMENT 0 YS2-12p06.q1k vc_3 506 62 2512 2511 C 445 0.00 546 reject_low 4 ALIGNMENT 0 YS2-12p06.q1k vc_2 506 62 2145 2144 C 445 0.00 546 reject_low 3 ALIGNMENT 36 YS2-12p06.q1k vc_5 543 508 1 36 C 36 100.00 546 reject_low 8 ALIGNMENT 450 YS2-12p06.q1k chr13 506 36 686778 687248 C 471 99.58 546 accept_chi 0 ALIGNMENT 439 YS2-12p06.p1k chr13 55 524 686778 687248 F 470 98.94 540 accept_chi 1 ALIGNMENT 0 YS2-12p06.q1k vc_5 507 62 37 36 C 446 0.00 546 reject_low 8 ALIGNMENT 0 YS2-12p06.p1k chr13 525 540 687248 687247 F 16 0.00 540 accept_chi 1 ALIGNMENT 0 YS2-12p06.q1k vc_4 62 506 5832 5831 F 445 0.00 546 reject_low 5 ALIGNMENT 40 YS2-12p06.q1k vc_2 546 507 2105 2144 C 40 100.00 546 reject_low 3 ALIGNMENT 0 YS2-12p06.q1k chr13 546 507 686779 686778 C 40 0.00 546 accept_chi 0 ALIGNMENT 38 YS2-12p06.q1k vc_7 509 546 13525 13562 F 38 100.00 546 reject_low 7 ALIGNMENT 39 YS2-12p06.q1k vc_5 546 508 5025 5063 C 39 100.00 546 reject_low 6 ALIGNMENT 40 YS2-12p06.q1k vc_4 507 546 5832 5871 F 40 100.00 546 reject_low 5 ALIGNMENT 40 YS2-12p06.q1k vc_1 546 507 2472 2511 C 40 100.00 546 reject_low 2 ALIGNMENT 0 YS2-12p06.q1k vc_7 62 508 13525 13524 F 447 0.00 546 reject_low 7 ALIGNMENT 40 YS2-12p06.q1k vc_3 546 507 2472 2511 C 40 100.00 546 reject_low 4 ALIGNMENT 0 YS2-12p06.q1k vc_5 507 62 5064 5063 C 446 0.00 546 reject_low 6 ALIGNMENT 949 YS2-12p08.p1k chr15 1106 27 206755 207855 C 1080 96.57 1341 accept_chi 0 ALIGNMENT 925 YS2-12p08.q1k chr04 39 1073 1007916 1008959 F 1035 97.68 1328 accept_chi 1 ALIGNMENT 197 YS2-12p09.p1k chr10 714 60 738000 738654 C 655 77.56 1274 reject_low 3 ALIGNMENT 197 YS2-12p09.p1k chr04 60 714 7062 7716 F 655 77.56 1274 reject_low 2 ALIGNMENT 903 YS2-12p09.p1k chr02 1091 29 802345 803420 C 1063 96.52 1274 ambiguous_tel 1 ALIGNMENT 0 YS2-12p09.p1k chr04 715 904 7716 7715 F 190 0.00 1274 reject_low 2 ALIGNMENT 0 YS2-12p09.q1k chr11 868 906 644836 644835 F 39 0.00 1355 accept 0 ALIGNMENT 790 YS2-12p09.q1k chr11 39 867 644010 644836 F 829 99.52 1355 accept 0 ALIGNMENT 0 YS2-12p09.p1k chr10 904 715 738001 738000 C 190 0.00 1274 reject_low 3 ALIGNMENT 663 YS2-12p10.p1k chr01 1079 169 221730 222643 C 911 91.33 1322 reject_low 1 ALIGNMENT 0 YS2-12p10.p1k chr15 234 868 29256 29255 F 635 0.00 1322 reject_low 6 ALIGNMENT 0 YS2-12p10.p1k chr01 868 234 222688 222687 C 635 0.00 1322 reject_low 3 ALIGNMENT 0 YS2-12p10.p1k chr08 868 234 543299 543298 C 635 0.00 1322 reject_low 4 ALIGNMENT 118 YS2-12p10.p1k chr15 169 412 29300 29543 F 244 83.61 1322 accept 0 ALIGNMENT 369 YS2-12p10.p1k chr15 694 1192 29714 30223 F 499 91.18 1322 accept 0 ALIGNMENT 0 YS2-12p10.p1k chr15 62 168 29300 29299 F 107 0.00 1322 accept 0 ALIGNMENT 0 YS2-12p10.p1k chr08 168 62 543255 543254 C 107 0.00 1322 reject_low 2 ALIGNMENT 171 YS2-12p10.p1k chr01 233 38 222687 222881 C 196 96.43 1322 reject_low 3 ALIGNMENT 0 YS2-12p10.q1k chr15 62 298 34328 34327 F 237 0.00 1371 reject_low 5 ALIGNMENT 995 YS2-12p10.q1k chr15 1206 40 33434 34612 C 1167 96.23 1371 accept 0 ALIGNMENT 49 YS2-12p10.p1k chr15 163 233 29186 29256 F 71 90.14 1322 reject_low 6 ALIGNMENT 610 YS2-12p10.p1k chr08 970 169 542453 543254 C 802 92.64 1322 reject_low 2 ALIGNMENT 171 YS2-12p10.p1k chr08 233 38 543298 543492 C 196 96.43 1322 reject_low 4 ALIGNMENT 0 YS2-12p10.p1k chr15 413 693 29544 29713 F 281 0.00 1322 accept 0 ALIGNMENT 26 YS2-12p10.q1k chr15 299 324 34328 34353 F 26 100.00 1371 reject_low 5 ALIGNMENT 0 YS2-12p10.p1k chr15 62 162 29186 29185 F 101 0.00 1322 reject_low 6 ALIGNMENT 0 YS2-12p10.p1k chr01 168 62 222644 222643 C 107 0.00 1322 reject_low 1 ALIGNMENT 0 YS2-12p10.q1k chr15 325 924 34353 34352 F 600 0.00 1371 reject_low 5 ALIGNMENT 930 YS2-12p12.q1k chr08 1124 39 399054 400149 C 1086 96.32 1346 accept 0 ALIGNMENT 991 YS2-12p12.p1k chr08 28 1151 396021 397149 F 1124 96.62 1344 accept 0 ALIGNMENT 1004 YS2-12p14.p1k chr16 1231 26 10523 11745 C 1206 95.52 1307 ambiguous_tel 0 ALIGNMENT 48 YS2-12p14.q1k chr16 1042 963 942428 942508 C 80 95.00 1378 reject_low 8 ALIGNMENT 0 YS2-12p14.q1k chr16 962 933 942509 942510 C 30 0.00 1378 reject_low 8 ALIGNMENT 0 YS2-12p14.q1k chr10 639 668 6695 7352 F 30 0.00 1378 reject_low 10 ALIGNMENT 78 YS2-12p14.q1k chr02 549 638 5462 5551 F 90 96.67 1378 reject_low 17 ALIGNMENT 0 YS2-12p14.q1k chr06 639 679 4390 5127 F 41 0.00 1378 reject_low 14 ALIGNMENT 1027 YS2-12p14.p1k chr15 26 1231 1079396 1080619 F 1206 96.02 1307 ambiguous_tel 1 ALIGNMENT 0 YS2-12p14.q1k chr13 638 637 5242 5902 F 0 0.00 1378 reject_low 5 ALIGNMENT 0 YS2-12p14.q1k chr08 548 522 557371 557370 C 27 0.00 1378 reject_low 19 ALIGNMENT 262 YS2-12p14.q1k chr08 669 1115 5087 5542 F 447 89.04 1378 reject_low 15 ALIGNMENT 304 YS2-12p14.q1k chr05 1218 669 569449 570007 C 550 87.64 1378 reject_low 13 ALIGNMENT 0 YS2-12p14.q1k chr05 668 639 570008 570609 C 30 0.00 1378 reject_low 13 ALIGNMENT 571 YS2-12p14.q1k chr15 638 33 1084910 1085518 C 606 99.01 1378 ambiguous_tel 1 ALIGNMENT 507 YS2-12p14.q1k chr14 33 638 5709 6322 F 606 95.87 1378 reject_low 11 ALIGNMENT 693 YS2-12p14.q1k chr16 932 33 942511 943417 C 900 93.67 1378 reject_low 8 ALIGNMENT 0 YS2-12p14.q1k chr12 548 522 1065530 1065529 C 27 0.00 1378 reject_low 16 ALIGNMENT 0 YS2-12p14.q1k chr15 692 639 1084304 1084909 C 54 0.00 1378 ambiguous_tel 1 ALIGNMENT 0 YS2-12p14.q1k chr07 668 639 1084051 1084645 C 30 0.00 1378 reject_low 12 ALIGNMENT 78 YS2-12p14.q1k chr12 638 549 1065440 1065529 C 90 96.67 1378 reject_low 16 ALIGNMENT 0 YS2-12p14.q1k chr03 661 62 316196 316195 C 600 0.00 1378 reject_low 20 ALIGNMENT 425 YS2-12p14.q1k chr02 33 521 4960 5461 F 489 96.73 1378 reject_low 17 ALIGNMENT 0 YS2-12p14.q1k chr14 639 662 6323 7005 F 24 0.00 1378 reject_low 11 ALIGNMENT 0 YS2-12p14.q1k chr12 639 662 10902 11667 F 24 0.00 1378 reject_low 7 ALIGNMENT 260 YS2-12p14.q1k chr04 1313 669 1524356 1525024 C 645 82.79 1378 reject_low 4 ALIGNMENT 0 YS2-12p14.q1k chr16 639 692 6232 6837 F 54 0.00 1378 ambiguous_tel 0 ALIGNMENT 0 YS2-12p14.q1k chr02 639 669 5552 6190 F 31 0.00 1378 reject_low 17 ALIGNMENT 307 YS2-12p14.q1k chr12 521 33 1065530 1066002 C 489 90.59 1378 reject_low 16 ALIGNMENT 236 YS2-12p14.q1k chr16 693 1190 6838 7341 F 498 85.14 1378 ambiguous_tel 0 ALIGNMENT 262 YS2-12p14.q1k chr14 663 1115 7006 7466 F 453 88.96 1378 reject_low 11 ALIGNMENT 578 YS2-12p14.q1k chr12 33 638 10294 10901 F 606 99.34 1378 reject_low 7 ALIGNMENT 507 YS2-12p14.q1k chr07 638 33 1084646 1085259 C 606 95.87 1378 reject_low 12 ALIGNMENT 507 YS2-12p14.q1k chr16 33 638 5618 6231 F 606 95.87 1378 ambiguous_tel 0 ALIGNMENT 0 YS2-12p14.q1k chr08 637 638 556548 557281 C 0 0.00 1378 reject_low 19 ALIGNMENT 322 YS2-12p14.q1k chr03 663 1153 682 1177 F 491 91.24 1378 reject_low 18 ALIGNMENT 422 YS2-12p14.q1k chr05 638 33 570610 571199 C 606 92.41 1378 reject_low 13 ALIGNMENT 0 YS2-12p14.q1k chr02 522 548 5462 5461 F 27 0.00 1378 reject_low 17 ALIGNMENT 933 YS2-12p14.p1k chr13 26 1231 919219 920433 F 1206 93.86 1307 reject_low 2 ALIGNMENT 274 YS2-12p14.q1k chr03 1217 662 315634 316195 C 556 85.97 1378 reject_low 20 ALIGNMENT 571 YS2-12p14.q1k chr04 638 33 1525745 1526353 C 606 99.01 1378 reject_low 4 ALIGNMENT 0 YS2-12p14.q1k chr12 639 662 5367 11667 F 24 0.00 1378 reject_low 6 ALIGNMENT 25 YS2-12p14.q1k chr05 977 1124 6372 6521 F 148 77.70 1378 reject_low 21 ALIGNMENT 571 YS2-12p14.q1k chr12 638 33 1071946 1072554 C 606 99.01 1378 reject_low 3 ALIGNMENT 217 YS2-12p14.q1k chr08 1042 637 556141 556548 C 406 88.18 1378|0,1 reject_low 19 ALIGNMENT 0 YS2-12p14.q1k chr09 639 668 6712 7369 F 30 0.00 1378 reject_low 9 ALIGNMENT 237 YS2-12p14.q1k chr09 669 1217 7370 7930 F 549 84.15 1378 reject_low 9 ALIGNMENT 420 YS2-12p14.q1k chr08 33 490 4491 4951 F 458 98.25 1378 reject_low 15 ALIGNMENT 0 YS2-12p14.q1k chr05 639 976 6227 6371 F 338 0.00 1378 reject_low 21 ALIGNMENT 312 YS2-12p14.q1k chr05 33 638 5664 6226 F 606 87.95 1378 reject_low 21 ALIGNMENT 78 YS2-12p14.q1k chr08 638 549 557281 557370 C 90 96.67 1378|1,0 reject_low 19 ALIGNMENT 421 YS2-12p14.q1k chr06 33 638 3797 4389 F 606 92.41 1378 reject_low 14 ALIGNMENT 285 YS2-12p14.q1k chr02 670 1217 6191 6753 F 548 86.50 1378 reject_low 17 ALIGNMENT 0 YS2-12p14.q1k chr08 491 668 4952 5086 F 178 0.00 1378 reject_low 15 ALIGNMENT 237 YS2-12p14.q1k chr10 669 1217 7353 7913 F 549 84.15 1378 reject_low 10 ALIGNMENT 420 YS2-12p14.q1k chr08 521 33 557371 557871 C 489 96.52 1378 reject_low 19 ALIGNMENT 233 YS2-12p14.q1k chr15 1190 693 1083800 1084303 C 498 84.94 1378 ambiguous_tel 1 ALIGNMENT 259 YS2-12p14.q1k chr12 663 1217 11668 12231 F 555 84.86 1378 reject_low 6,7 ALIGNMENT 279 YS2-12p14.q1k chr13 637 1115 5902 6382 F 479 88.94 1378|1,0 reject_low 5 ALIGNMENT 578 YS2-12p14.q1k chr13 33 638 4635 5242 F 606 99.34 1378|0,1 reject_low 5 ALIGNMENT 239 YS2-12p14.q1k chr06 680 1115 5128 5568 F 436 88.07 1378 reject_low 14 ALIGNMENT 510 YS2-12p14.q1k chr09 33 638 6098 6711 F 606 96.04 1378 reject_low 9 ALIGNMENT 0 YS2-12p14.q1k chr04 668 639 1525025 1525744 C 30 0.00 1378 reject_low 4 ALIGNMENT 257 YS2-12p14.q1k chr12 1315 658 1064024 1064705 C 658 82.22 1378 reject_low 3,16 ALIGNMENT 0 YS2-12p14.q1k chr12 657 639 1064706 1065439 C 19 0.00 1378 reject_low 16 ALIGNMENT 510 YS2-12p14.q1k chr10 33 638 6081 6694 F 606 96.04 1378 reject_low 10 ALIGNMENT 254 YS2-12p14.q1k chr07 1115 669 1083603 1084050 C 447 88.59 1378 reject_low 12 ALIGNMENT 0 YS2-12p14.q1k chr03 62 662 682 681 F 601 0.00 1378 reject_low 18 ALIGNMENT 0 YS2-12p14.q1k chr12 657 639 1064706 1071945 C 19 0.00 1378 reject_low 3 ALIGNMENT 578 YS2-12p14.q1k chr12 33 638 4759 5366 F 606 99.34 1378 reject_low 6 ALIGNMENT 929 YS2-12p15.p1k chr04 26 1172 1492458 1493617 F 1147 95.12 1329 accept 0 ALIGNMENT 1032 YS2-12p15.q1k chr04 1185 30 1495374 1496537 C 1156 97.49 1347 accept 0 ALIGNMENT 41 YS2-12p16.q1k vc_2 263 223 2105 2145 C 41 100.00 263 reject_low 3 ALIGNMENT 39 YS2-12p16.q1k vc_5 263 225 5025 5063 C 39 100.00 263 reject_low 6 ALIGNMENT 0 YS2-12p16.q1k vc_1 222 62 2513 2512 C 161 0.00 263 reject_low 2 ALIGNMENT 0 YS2-12p16.q1k vc_5 224 62 37 36 C 163 0.00 263 reject_low 8 ALIGNMENT 41 YS2-12p16.q1k vc_3 263 223 2472 2512 C 41 100.00 263 reject_low 4 ALIGNMENT 0 YS2-12p16.q1k chr11 224 263 331523 331522 F 40 0.00 263 accept_chi 1 ALIGNMENT 0 YS2-12p16.p1k chr11 231 213 331339 331338 C 19 0.00 231 accept_chi 0 ALIGNMENT 0 YS2-12p16.q1k vc_7 62 225 13525 13524 F 164 0.00 263 reject_low 7 ALIGNMENT 41 YS2-12p16.q1k vc_4 223 263 5831 5871 F 41 100.00 263 reject_low 5 ALIGNMENT 41 YS2-12p16.q1k vc_1 263 223 2472 2512 C 41 100.00 263 reject_low 2 ALIGNMENT 0 YS2-12p16.q1k vc_2 222 62 2146 2145 C 161 0.00 263 reject_low 3 ALIGNMENT 176 YS2-12p16.q1k chr11 38 223 331338 331523 F 186 99.46 263 accept_chi 1 ALIGNMENT 0 YS2-12p16.q1k vc_4 62 222 5831 5830 F 161 0.00 263 reject_low 5 ALIGNMENT 36 YS2-12p16.q1k vc_5 260 225 1 36 C 36 100.00 263 reject_low 8 ALIGNMENT 176 YS2-12p16.p1k chr11 212 27 331338 331523 C 186 99.46 231 accept_chi 0 ALIGNMENT 0 YS2-12p16.q1k vc_3 222 62 2513 2512 C 161 0.00 263 reject_low 4 ALIGNMENT 38 YS2-12p16.q1k vc_7 226 263 13525 13562 F 38 100.00 263 reject_low 7 ALIGNMENT 0 YS2-12p16.q1k vc_5 224 62 5064 5063 C 163 0.00 263 reject_low 6 ALIGNMENT 0 YS2-12p17.q1k chr12 886 715 931062 931061 C 172 0.00 1350 reject_low 1 ALIGNMENT 204 YS2-12p17.q1k chr12 714 424 931061 931351 C 291 90.38 1350 reject_low 1 ALIGNMENT 991 YS2-12p17.q1k chr04 31 1175 322307 323462 F 1145 96.42 1350 accept 0 ALIGNMENT 908 YS2-12p17.p1k chr04 1072 32 326865 327911 C 1041 97.31 1305 accept 0 ALIGNMENT 0 YS2-12p17.q1k chr12 423 62 931352 931351 C 362 0.00 1350 reject_low 1 ALIGNMENT 36 YS2-12p19.q1k vc_5 340 305 1 36 C 36 100.00 343 reject_low 7 ALIGNMENT 236 YS2-12p19.p1k chr02 282 26 277737 277997 C 257 98.44 298 accept_chi 1 ALIGNMENT 256 YS2-12p19.q1k chr02 37 302 277737 278003 F 266 99.62 343 accept_chi 0 ALIGNMENT 0 YS2-12p19.q1k vc_7 62 305 13525 13524 F 244 0.00 343 reject_low 6 ALIGNMENT 39 YS2-12p19.q1k vc_5 343 305 5025 5063 C 39 100.00 343 reject_low 5 ALIGNMENT 0 YS2-12p19.q1k vc_3 302 62 2513 2512 C 241 0.00 343 reject_low 3 ALIGNMENT 0 YS2-12p19.q1k vc_1 302 62 2513 2512 C 241 0.00 343 reject_low 2 ALIGNMENT 38 YS2-12p19.q1k vc_7 306 343 13525 13562 F 38 100.00 343 reject_low 6 ALIGNMENT 41 YS2-12p19.q1k vc_4 303 343 5831 5871 F 41 100.00 343 reject_low 4 ALIGNMENT 0 YS2-12p19.q1k vc_5 304 62 5064 5063 C 243 0.00 343 reject_low 5 ALIGNMENT 0 YS2-12p19.q1k vc_4 62 302 5831 5830 F 241 0.00 343 reject_low 4 ALIGNMENT 0 YS2-12p19.p1k chr02 298 283 277738 277737 C 16 0.00 298 accept_chi 1 ALIGNMENT 41 YS2-12p19.q1k vc_3 343 303 2472 2512 C 41 100.00 343 reject_low 3 ALIGNMENT 0 YS2-12p19.q1k vc_5 304 62 37 36 C 243 0.00 343 reject_low 7 ALIGNMENT 0 YS2-12p19.q1k chr02 303 343 278003 278002 F 41 0.00 343 accept_chi 0 ALIGNMENT 41 YS2-12p19.q1k vc_1 343 303 2472 2512 C 41 100.00 343 reject_low 2 ALIGNMENT 990 YS2-12p21.p1k chr01 1233 31 78234 79444 C 1203 94.93 1253 accept 0 ALIGNMENT 958 YS2-12p21.q1k chr01 31 1144 74275 75388 F 1114 96.59 1306 accept 0 ALIGNMENT 979 YS2-12p22.q1k chr15 1119 31 696248 697350 C 1089 97.70 1261 accept 0 ALIGNMENT 975 YS2-12p22.p1k chr15 30 1163 691841 692972 F 1134 96.47 1272 accept 0 ALIGNMENT 929 YS2-12p23.q1k chr13 1121 36 35831 36927 C 1086 96.22 1196 accept 0 ALIGNMENT 943 YS2-12p23.p1k chr13 33 1181 31425 32576 F 1149 94.95 1231 accept 0 ALIGNMENT 943 YS2-12p24.q1k chr04 1197 32 1410754 1411918 C 1166 94.34 1302 accept 0 ALIGNMENT 1037 YS2-12p24.p1k chr04 28 1202 1408681 1409859 F 1175 96.77 1202 accept 0 ALIGNMENT 939 YS2-13a01.p1k chr12 1137 30 440818 441927 C 1108 96.21 1137 accept 0 ALIGNMENT 953 YS2-13a01.q1k chr12 37 1122 437164 438266 F 1086 97.51 1293 accept 0 ALIGNMENT 907 YS2-13a02.q1k chr10 38 1161 140458 141573 F 1124 95.46 1424 accept 0 ALIGNMENT 752 YS2-13a02.p1k chr10 991 38 141482 142419 C 954 94.97 1294 accept 0 ALIGNMENT 0 YS2-13a03.q1k chr16 833 407 96498 96497 C 427 0.00 1359 reject_low 1 ALIGNMENT 919 YS2-13a03.p1k chr13 1102 34 634317 635381 C 1069 96.91 1177 accept 0 ALIGNMENT 995 YS2-13a03.q1k chr13 37 1276 634101 635337 F 1240 95.00 1359 accept 0 ALIGNMENT 262 YS2-13a03.q1k chr16 406 37 96497 96866 C 370 90.81 1359 reject_low 1 ALIGNMENT 870 YS2-13a04.p1k chr15 25 1052 311643 312663 F 1028 96.21 1218 accept 0 ALIGNMENT 995 YS2-13a04.q1k chr15 1130 31 316429 317533 C 1100 97.36 1390 accept 0 ALIGNMENT 995 YS2-13a05.q1k chr10 40 1202 465574 466754 F 1163 95.96 1321 accept 0 ALIGNMENT 961 YS2-13a05.p1k chr10 1173 31 468901 470042 C 1143 95.63 1173 accept 0 ALIGNMENT 924 YS2-13a07.q1k chr05 37 1154 248206 249318 F 1118 96.06 1339 accept 0 ALIGNMENT 997 YS2-13a07.p1k chr05 1149 29 252359 253480 C 1121 97.23 1156 accept 0 ALIGNMENT 808 YS2-13a08.p1k chr04 34 992 1220980 1221930 F 959 96.77 1294 accept 0 ALIGNMENT 1059 YS2-13a08.q1k chr04 1274 36 1221182 1222434 C 1239 96.61 1444 accept 0 ALIGNMENT 0 YS2-13a09.q1k chr16 62 109 850646 850645 F 48 0.00 1283 reject_low 12 ALIGNMENT 0 YS2-13a09.q1k chr07 811 253 535382 535381 C 559 0.00 1283 reject_low 13 ALIGNMENT 0 YS2-13a09.q1k chr13 253 811 357169 357168 F 559 0.00 1283 reject_low 14 ALIGNMENT 0 YS2-13a09.q1k chr01 253 811 160404 160403 F 559 0.00 1283 reject_low 7 ALIGNMENT 34 YS2-13a09.q1k chr06 228 155 137832 137907 C 74 85.14 1283|0,3 reject_low 32 ALIGNMENT 88 YS2-13a09.q1k chr10 252 110 483721 483865 C 143 89.51 1283 reject_low 10 ALIGNMENT 0 YS2-13a09.q1k chr07 109 62 535526 535525 C 48 0.00 1283 reject_low 13 ALIGNMENT 0 YS2-13a09.q1k chr09 62 109 197157 197156 F 48 0.00 1283 reject_low 18 ALIGNMENT 0 YS2-13a09.q1k chr13 811 253 196504 196503 C 559 0.00 1283 reject_low 11 ALIGNMENT 0 YS2-13a09.q1k chr03 240 811 142898 142897 F 572 0.00 1283 reject_low 28 ALIGNMENT 0 YS2-13a09.q1k chr03 163 811 151515 151514 F 649 0.00 1283 reject_low 26 ALIGNMENT 0 YS2-13a09.q1k chr03 253 811 124296 124295 F 559 0.00 1283 reject_low 21 ALIGNMENT 0 YS2-13a09.q1k chr03 811 233 149663 149662 C 579 0.00 1283 reject_low 19 ALIGNMENT 0 YS2-13a09.q1k chr07 109 62 541669 541668 C 48 0.00 1283 reject_low 8 ALIGNMENT 88 YS2-13a09.q1k chr16 110 252 850646 850790 F 143 89.51 1283 reject_low 12 ALIGNMENT 0 YS2-13a09.q1k chr05 811 253 138389 138388 C 559 0.00 1283 reject_low 20 ALIGNMENT 0 YS2-13a09.q1k chr16 62 99 856224 856223 F 38 0.00 1283 reject_low 2 ALIGNMENT 0 YS2-13a09.q1k chr13 62 109 362607 362606 F 48 0.00 1283 reject_low 15 ALIGNMENT 90 YS2-13a09.q1k chr13 252 104 189918 190068 C 149 89.26 1283 reject_low 4 ALIGNMENT 0 YS2-13a09.q1k chr16 253 811 856378 856377 F 559 0.00 1283 reject_low 2 ALIGNMENT 0 YS2-13a09.q1k chr05 226 811 135744 135743 F 586 0.00 1283 reject_low 27 ALIGNMENT 0 YS2-13a09.q1k chr16 62 109 804662 804661 F 48 0.00 1283 reject_low 25 ALIGNMENT 85 YS2-13a09.q1k chr07 252 110 535381 535525 C 143 88.81 1283 reject_low 13 ALIGNMENT 0 YS2-13a09.q1k chr07 220 811 535652 535651 F 592 0.00 1283 reject_low 31 ALIGNMENT 0 YS2-13a09.q1k chr13 811 253 189919 189918 C 559 0.00 1283 reject_low 4 ALIGNMENT 0 YS2-13a09.q1k chr10 811 253 472550 472549 C 559 0.00 1283 reject_low 9 ALIGNMENT 0 YS2-13a09.q1k chr06 157 158 137905 143868 C 0 0.00 1283 reject_low 32 ALIGNMENT 0 YS2-13a09.q1k chr05 811 229 176716 176715 C 583 0.00 1283 reject_low 23 ALIGNMENT 0 YS2-13a09.q1k chr03 62 95 151451 151450 F 34 0.00 1283 reject_low 26 ALIGNMENT 0 YS2-13a09.q1k chr03 62 109 124152 124151 F 48 0.00 1283 reject_low 21 ALIGNMENT 0 YS2-13a09.q1k chr06 109 62 143917 143916 C 48 0.00 1283 reject_low 32 ALIGNMENT 843 YS2-13a09.q1k chr16 1114 103 803622 804641 C 1012 96.05 1283|0,3 accept_trans 0 ALIGNMENT 49 YS2-13a09.q1k chr05 112 225 135631 135744 F 114 83.33 1283 reject_low 27 ALIGNMENT 0 YS2-13a09.q1k chr13 811 253 184337 184336 C 559 0.00 1283 reject_low 3 ALIGNMENT 62 YS2-13a09.q1k chr05 228 110 176715 176834 C 119 86.55 1283 reject_low 23 ALIGNMENT 0 YS2-13a09.q1k chr13 103 62 184487 184486 C 42 0.00 1283 reject_low 3 ALIGNMENT 0 YS2-13a09.q1k chr16 105 106 804639 810561 C 0 0.00 1283 accept_trans 0 ALIGNMENT 0 YS2-13a09.q1k chr06 811 226 138104 138103 C 586 0.00 1283 reject_low 29 ALIGNMENT 35 YS2-13a09.q1k chr06 159 110 143867 143916 C 50 92.00 1283|2,0 reject_low 32 ALIGNMENT 57 YS2-13a09.q1k chr16 110 225 804662 804779 F 116 85.34 1283 reject_low 25 ALIGNMENT 88 YS2-13a09.q1k chr13 252 110 196503 196647 C 143 89.51 1283 reject_low 11 ALIGNMENT 0 YS2-13a09.q1k chr09 253 811 197303 197302 F 559 0.00 1283 reject_low 18 ALIGNMENT 0 YS2-13a09.q1k chr13 109 62 196648 196647 C 48 0.00 1283 reject_low 11 ALIGNMENT 73 YS2-13a09.q1k chr05 252 110 138388 138532 C 143 86.01 1283 reject_low 20 ALIGNMENT 90 YS2-13a09.q1k chr13 104 252 372711 372861 F 149 89.26 1283 reject_low 5 ALIGNMENT 931 YS2-13a09.p1k chr16 30 1125 800198 801297 F 1096 95.99 1164 accept_trans 0 ALIGNMENT 75 YS2-13a09.q1k chr03 232 103 149662 149793 C 130 88.46 1283 reject_low 19 ALIGNMENT 87 YS2-13a09.q1k chr05 104 252 498094 498244 F 149 88.59 1283 reject_low 6 ALIGNMENT 0 YS2-13a09.q1k chr11 109 62 163154 163153 C 48 0.00 1283 reject_low 22 ALIGNMENT 85 YS2-13a09.q1k chr13 110 252 362607 362751 F 143 88.81 1283 reject_low 15 ALIGNMENT 0 YS2-13a09.q1k chr13 62 109 357025 357024 F 48 0.00 1283 reject_low 14 ALIGNMENT 0 YS2-13a09.q1k chr07 811 253 541525 541524 C 559 0.00 1283 reject_low 8 ALIGNMENT 88 YS2-13a09.q1k chr07 252 110 541524 541668 C 143 89.51 1283 reject_low 8 ALIGNMENT 0 YS2-13a09.q1k chr03 62 109 168616 168615 F 48 0.00 1283 reject_low 24 ALIGNMENT 0 YS2-13a09.q1k chr03 226 811 168733 168732 F 586 0.00 1283 reject_low 24 ALIGNMENT 0 YS2-13a09.q1k chr10 811 253 483722 483721 C 559 0.00 1283 reject_low 10 ALIGNMENT 0 YS2-13a09.q1k chr05 62 103 498094 498093 F 42 0.00 1283 reject_low 6 ALIGNMENT 26 YS2-13a09.q1k chr07 149 219 535580 535652 F 71 81.69 1283 reject_low 31 ALIGNMENT 0 YS2-13a09.q1k chr07 62 148 535580 535579 F 87 0.00 1283 reject_low 31 ALIGNMENT 67 YS2-13a09.q1k chr11 237 110 163023 163153 C 128 86.72 1283 reject_low 22 ALIGNMENT 85 YS2-13a09.q1k chr13 110 252 357025 357169 F 143 88.81 1283 reject_low 14 ALIGNMENT 46 YS2-13a09.q1k chr06 225 112 143730 143843 C 114 82.46 1283 reject_low 30 ALIGNMENT 46 YS2-13a09.q1k chr06 225 112 138103 138216 C 114 82.46 1283 reject_low 29 ALIGNMENT 0 YS2-13a09.q1k chr06 811 229 137833 137832 C 583 0.00 1283 reject_low 32 ALIGNMENT 0 YS2-13a09.q1k chr05 109 62 176835 176834 C 48 0.00 1283 reject_low 23 ALIGNMENT 0 YS2-13a09.q1k chr10 109 62 483866 483865 C 48 0.00 1283 reject_low 10 ALIGNMENT 0 YS2-13a09.q1k chr06 111 62 143844 143843 C 50 0.00 1283 reject_low 30 ALIGNMENT 88 YS2-13a09.q1k chr01 110 252 160260 160404 F 143 89.51 1283 reject_low 7 ALIGNMENT 0 YS2-13a09.q1k chr16 95 62 776405 776404 C 34 0.00 1283 reject_low 1 ALIGNMENT 60 YS2-13a09.q1k chr03 110 225 168616 168733 F 116 86.21 1283 reject_low 24 ALIGNMENT 0 YS2-13a09.q1k chr13 253 811 372861 372860 F 559 0.00 1283 reject_low 5 ALIGNMENT 57 YS2-13a09.q1k chr16 108 33 810559 810636 C 76 94.74 1283|3,0 accept_trans 0 ALIGNMENT 89 YS2-13a09.q1k chr16 252 96 776247 776404 C 157 87.90 1283 reject_low 1 ALIGNMENT 0 YS2-13a09.q1k chr05 62 111 135631 135630 F 50 0.00 1283 reject_low 27 ALIGNMENT 0 YS2-13a09.q1k chr01 62 109 160260 160259 F 48 0.00 1283 reject_low 7 ALIGNMENT 0 YS2-13a09.q1k chr16 253 811 850790 850789 F 559 0.00 1283 reject_low 12 ALIGNMENT 0 YS2-13a09.q1k chr10 109 62 472694 472693 C 48 0.00 1283 reject_low 9 ALIGNMENT 0 YS2-13a09.q1k chr13 103 62 190069 190068 C 42 0.00 1283 reject_low 4 ALIGNMENT 0 YS2-13a09.q1k chr05 253 811 498244 498243 F 559 0.00 1283 reject_low 6 ALIGNMENT 0 YS2-13a09.q1k chr03 62 146 142804 142803 F 85 0.00 1283 reject_low 28 ALIGNMENT 79 YS2-13a09.q1k chr03 252 110 151683 151827 C 143 87.41 1283 reject_low 17 ALIGNMENT 0 YS2-13a09.q1k chr05 109 62 138533 138532 C 48 0.00 1283 reject_low 20 ALIGNMENT 0 YS2-13a09.q1k chr03 109 62 151828 151827 C 48 0.00 1283 reject_low 17 ALIGNMENT 0 YS2-13a09.q1k chr13 253 811 362751 362750 F 559 0.00 1283 reject_low 15 ALIGNMENT 0 YS2-13a09.q1k chr16 811 253 776248 776247 C 559 0.00 1283 reject_low 1 ALIGNMENT 45 YS2-13a09.q1k chr03 147 239 142804 142898 F 93 86.02 1283 reject_low 28 ALIGNMENT 79 YS2-13a09.q1k chr09 110 252 197157 197303 F 143 87.41 1283 reject_low 18 ALIGNMENT 94 YS2-13a09.q1k chr16 100 252 856224 856378 F 153 89.54 1283 reject_low 2 ALIGNMENT 0 YS2-13a09.q1k chr06 811 226 143731 143730 C 586 0.00 1283 reject_low 30 ALIGNMENT 82 YS2-13a09.q1k chr02 252 110 221206 221352 C 143 88.11 1283 reject_low 16 ALIGNMENT 31 YS2-13a09.q1k chr03 96 162 151451 151515 F 67 86.57 1283 reject_low 26 ALIGNMENT 70 YS2-13a09.q1k chr03 110 252 124152 124296 F 143 85.31 1283 reject_low 21 ALIGNMENT 0 YS2-13a09.q1k chr03 102 62 149794 149793 C 41 0.00 1283 reject_low 19 ALIGNMENT 0 YS2-13a09.q1k chr03 811 253 151684 151683 C 559 0.00 1283 reject_low 17 ALIGNMENT 0 YS2-13a09.q1k chr13 62 103 372711 372710 F 42 0.00 1283 reject_low 5 ALIGNMENT 0 YS2-13a09.q1k chr06 111 62 138217 138216 C 50 0.00 1283 reject_low 29 ALIGNMENT 0 YS2-13a09.q1k chr02 109 62 221353 221352 C 48 0.00 1283 reject_low 16 ALIGNMENT 90 YS2-13a09.q1k chr13 252 104 184336 184486 C 149 89.26 1283 reject_low 3 ALIGNMENT 0 YS2-13a09.q1k chr16 226 811 804779 804778 F 586 0.00 1283 reject_low 25 ALIGNMENT 0 YS2-13a09.q1k chr02 811 253 221207 221206 C 559 0.00 1283 reject_low 16 ALIGNMENT 0 YS2-13a09.q1k chr11 811 238 163024 163023 C 574 0.00 1283 reject_low 22 ALIGNMENT 88 YS2-13a09.q1k chr10 252 110 472549 472693 C 143 89.51 1283 reject_low 9 ALIGNMENT 350 YS2-13a10.p1k chr14 950 191 319698 320449 C 760 83.03 1378 accept 0 ALIGNMENT 490 YS2-13a10.q1k chr14 99 990 315149 316029 F 892 86.77 1384 accept 0 ALIGNMENT 36 YS2-13a11.q1k chr02 705 654 793892 793943 C 52 90.38 1332 ambiguous_tel 2 ALIGNMENT 70 YS2-13a11.q1k chr02 797 706 793780 793871 C 92 92.39 1332 ambiguous_tel 2 ALIGNMENT 39 YS2-13a11.q1k chr02 962 888 793568 793641 C 75 85.33 1332 ambiguous_tel 2 ALIGNMENT 863 YS2-13a11.p1k chr07 62 1171 1078486 1079596 F 1110 93.78 1188 ambiguous_tel 1 ALIGNMENT 0 YS2-13a11.q1k chr02 705 706 793872 793891 C 0 0.00 1332 ambiguous_tel 2 ALIGNMENT 962 YS2-13a11.p1k chr02 62 1171 807226 808336 F 1110 96.76 1188 ambiguous_tel 0 ALIGNMENT 0 YS2-13a11.q1k chr02 887 798 793642 793779 C 90 0.00 1332 ambiguous_tel 2 ALIGNMENT 0 YS2-13a11.q1k chr02 653 62 793944 793943 C 592 0.00 1332 ambiguous_tel 2 ALIGNMENT 0 YS2-13a12.q1k chr08 62 202 365356 365355 F 141 0.00 1407 reject_low 2 ALIGNMENT 0 YS2-13a12.q1k chr15 840 258 227288 227287 C 583 0.00 1407 reject_low 1 ALIGNMENT 719 YS2-13a12.p1k chr11 71 981 384747 385657 F 911 94.29 1334 accept 0 ALIGNMENT 0 YS2-13a12.q1k chr08 252 840 365405 365404 F 589 0.00 1407 reject_low 2 ALIGNMENT 0 YS2-13a12.q1k chr13 218 62 354230 354229 C 157 0.00 1407 reject_low 4 ALIGNMENT 34 YS2-13a12.q1k chr15 257 211 227287 227333 C 47 97.87 1407 reject_low 1 ALIGNMENT 26 YS2-13a12.q1k chr08 203 251 365356 365405 F 49 89.80 1407 reject_low 2 ALIGNMENT 30 YS2-13a12.q1k chr15 217 257 63056 63096 F 41 97.56 1407 reject_low 3 ALIGNMENT 0 YS2-13a12.q1k chr13 840 256 354194 354193 C 585 0.00 1407 reject_low 4 ALIGNMENT 0 YS2-13a12.q1k chr15 62 216 63056 63055 F 155 0.00 1407 reject_low 3 ALIGNMENT 20 YS2-13a12.q1k chr13 255 219 354193 354229 C 37 91.89 1407 reject_low 4 ALIGNMENT 0 YS2-13a12.q1k chr15 210 62 227334 227333 C 149 0.00 1407 reject_low 1 ALIGNMENT 907 YS2-13a12.q1k chr11 1252 29 385764 387001 C 1224 93.06 1407 accept 0 ALIGNMENT 0 YS2-13a12.q1k chr15 258 840 63096 63095 F 583 0.00 1407 reject_low 3 ALIGNMENT 148 YS2-13a13.q1k vc_2 950 1228 2164 2443 F 279 86.02 1353 reject_low 11 ALIGNMENT 118 YS2-13a13.q1k vc_4 950 1108 6353 6511 F 159 92.45 1353|1,0 reject_low 14 ALIGNMENT 148 YS2-13a13.q1k vc_7 1150 950 2527 2727 C 201 92.04 1353 reject_low 3 ALIGNMENT 105 YS2-13a13.p1k vc_2 1164 951 1908 2105 C 214 88.32 1238 reject_low 5 ALIGNMENT 0 YS2-13a13.p1k vc_1 950 124 2106 2105 C 827 0.00 1238 reject_low 4 ALIGNMENT 105 YS2-13a13.p1k vc_5 1164 951 4828 5025 C 214 88.32 1238 reject_low 2 ALIGNMENT 0 YS2-13a13.q1k vc_2 62 949 2164 2163 F 888 0.00 1353 reject_low 11 ALIGNMENT 0 YS2-13a13.p1k vc_5 950 124 5026 5025 C 827 0.00 1238 reject_low 2 ALIGNMENT 0 YS2-13a13.q1k vc_1 62 949 2531 2530 F 888 0.00 1353 reject_low 10 ALIGNMENT 81 YS2-13a13.q1k vc_4 1039 950 1446 1534 C 90 97.78 1353 reject_low 15 ALIGNMENT 41 YS2-13a13.q1k vc_3 950 910 2472 2512 C 41 100.00 1353 reject_low 20 ALIGNMENT 105 YS2-13a13.p1k vc_4 951 1164 5871 6068 F 214 88.32 1238 reject_low 7 ALIGNMENT 0 YS2-13a13.q1k vc_7 62 912 13525 13524 F 851 0.00 1353 reject_low 22 ALIGNMENT 0 YS2-13a13.q1k vc_1 909 62 2513 2512 C 848 0.00 1353 reject_low 18 ALIGNMENT 0 YS2-13a13.q1k vc_4 949 62 5813 5812 C 888 0.00 1353 reject_low 9 ALIGNMENT 41 YS2-13a13.q1k vc_1 950 910 2472 2512 C 41 100.00 1353 reject_low 18 ALIGNMENT 0 YS2-13a13.p1k vc_3 950 124 2473 2472 C 827 0.00 1238 reject_low 17 ALIGNMENT 118 YS2-13a13.q1k vc_4 950 1108 126 284 F 159 92.45 1353 reject_low 13 ALIGNMENT 38 YS2-13a13.q1k vc_7 913 950 13525 13562 F 38 100.00 1353 reject_low 22 ALIGNMENT 0 YS2-13a13.q1k vc_4 949 62 1535 1534 C 888 0.00 1353 reject_low 15 ALIGNMENT 26 YS2-13a13.p1k vc_1 981 951 2441 2472 C 31 96.77 1238 reject_low 16 ALIGNMENT 36 YS2-13a13.q1k vc_5 947 912 1 36 C 36 100.00 1353 reject_low 23 ALIGNMENT 105 YS2-13a13.p1k vc_7 951 1164 100 297 F 214 88.32 1238 reject_low 3 ALIGNMENT 0 YS2-13a13.p1k vc_7 124 950 13562 13561 F 827 0.00 1238 reject_low 8 ALIGNMENT 105 YS2-13a13.p1k vc_1 1164 951 1908 2105 C 214 88.32 1238 reject_low 4 ALIGNMENT 0 YS2-13a13.q1k vc_3 909 62 2513 2512 C 848 0.00 1353 reject_low 20 ALIGNMENT 840 YS2-13a13.q1k chr04 909 37 346105 346977 C 873 99.43 1353 accept_chi 1 ALIGNMENT 0 YS2-13a13.q1k vc_5 911 62 5064 5063 C 850 0.00 1353 reject_low 21 ALIGNMENT 0 YS2-13a13.q1k vc_5 62 949 2398 2397 F 888 0.00 1353 reject_low 2 ALIGNMENT 105 YS2-13a13.p1k vc_7 951 1164 13562 13759 F 214 88.32 1238 reject_low 8 ALIGNMENT 0 YS2-13a13.p1k vc_2 950 124 2106 2105 C 827 0.00 1238 reject_low 5 ALIGNMENT 0 YS2-13a13.q1k vc_5 911 62 37 36 C 850 0.00 1353 reject_low 23 ALIGNMENT 105 YS2-13a13.p1k vc_3 1164 951 1908 2105 C 214 88.32 1238 reject_low 6 ALIGNMENT 0 YS2-13a13.q1k vc_3 62 949 2531 2530 F 888 0.00 1353 reject_low 12 ALIGNMENT 148 YS2-13a13.q1k vc_3 950 1228 2531 2810 F 279 86.02 1353 reject_low 12 ALIGNMENT 0 YS2-13a13.q1k vc_4 62 949 126 125 F 888 0.00 1353 reject_low 13 ALIGNMENT 0 YS2-13a13.p1k vc_4 124 950 5871 5870 F 827 0.00 1238 reject_low 7 ALIGNMENT 148 YS2-13a13.q1k vc_5 950 1228 2398 2677 F 279 86.02 1353 reject_low 2 ALIGNMENT 842 YS2-13a13.p1k chr04 63 932 346105 346975 F 870 99.66 1238 accept_chi 0 ALIGNMENT 0 YS2-13a13.q1k vc_2 909 62 2146 2145 C 848 0.00 1353 reject_low 19 ALIGNMENT 149 YS2-13a13.q1k vc_4 1228 950 5531 5812 C 279 86.02 1353 reject_low 9 ALIGNMENT 41 YS2-13a13.q1k vc_2 950 910 2105 2145 C 41 100.00 1353 reject_low 19 ALIGNMENT 0 YS2-13a13.p1k vc_1 950 124 2473 2472 C 827 0.00 1238 reject_low 16 ALIGNMENT 39 YS2-13a13.q1k vc_5 950 912 5025 5063 C 39 100.00 1353 reject_low 21 ALIGNMENT 148 YS2-13a13.q1k vc_1 950 1228 2531 2810 F 279 86.02 1353 reject_low 10 ALIGNMENT 41 YS2-13a13.q1k vc_4 910 950 5831 5871 F 41 100.00 1353 reject_low 14 ALIGNMENT 0 YS2-13a13.q1k vc_4 62 909 5831 5830 F 848 0.00 1353 reject_low 14 ALIGNMENT 0 YS2-13a13.p1k vc_3 950 124 2106 2105 C 827 0.00 1238 reject_low 6 ALIGNMENT 26 YS2-13a13.p1k vc_3 981 951 2441 2472 C 31 96.77 1238 reject_low 17 ALIGNMENT 0 YS2-13a13.p1k vc_7 124 950 100 99 F 827 0.00 1238 reject_low 3 ALIGNMENT 0 YS2-13a13.q1k vc_7 949 62 2728 2727 C 888 0.00 1353 reject_low 3 ALIGNMENT 0 YS2-13a13.q1k vc_4 951 950 5872 6353 F 0 0.00 1353 reject_low 14 ALIGNMENT 0 YS2-13a14.q1k vc_5 283 62 37 36 C 222 0.00 322 reject_low 13 ALIGNMENT 0 YS2-13a14.q1k chr02 322 282 177705 177704 C 41 0.00 322 accept 0 ALIGNMENT 36 YS2-13a14.q1k vc_5 319 284 1 36 C 36 100.00 322 reject_low 13 ALIGNMENT 41 YS2-13a14.q1k vc_1 322 282 2472 2512 C 41 100.00 322 reject_low 8 ALIGNMENT 380 YS2-13a14.p1k vc_5 555 1 4123 4669 C 555 90.81 606 reject_vc 1 ALIGNMENT 0 YS2-13a14.q1k vc_7 62 284 13525 13524 F 223 0.00 322 reject_low 12 ALIGNMENT 377 YS2-13a14.p1k vc_1 555 1 1203 1749 C 555 90.63 606 reject_vc 3 ALIGNMENT 0 YS2-13a14.q1k vc_3 281 62 2513 2512 C 220 0.00 322 reject_low 9 ALIGNMENT 0 YS2-13a14.q1k vc_1 281 62 2513 2512 C 220 0.00 322 reject_low 8 ALIGNMENT 371 YS2-13a14.p1k vc_7 1 555 13918 14464 F 555 90.27 606 reject_vc 7 ALIGNMENT 0 YS2-13a14.q1k vc_5 283 62 5064 5063 C 222 0.00 322 reject_low 11 ALIGNMENT 235 YS2-13a14.q1k chr02 281 31 177704 177954 C 251 100.00 322 accept 0 ALIGNMENT 41 YS2-13a14.q1k vc_3 322 282 2472 2512 C 41 100.00 322 reject_low 9 ALIGNMENT 39 YS2-13a14.q1k vc_5 322 284 5025 5063 C 39 100.00 322 reject_low 11 ALIGNMENT 38 YS2-13a14.q1k vc_7 285 322 13525 13562 F 38 100.00 322 reject_low 12 ALIGNMENT 41 YS2-13a14.q1k vc_4 282 322 5831 5871 F 41 100.00 322 reject_low 10 ALIGNMENT 0 YS2-13a14.q1k vc_4 62 281 5831 5830 F 220 0.00 322 reject_low 10 ALIGNMENT 380 YS2-13a14.p1k vc_6 1 555 3712 4258 F 555 90.81 606 reject_vc 2 ALIGNMENT 371 YS2-13a14.p1k vc_7 1 555 456 1002 F 555 90.27 606 reject_vc 6 ALIGNMENT 377 YS2-13a14.p1k vc_2 555 1 1203 1749 C 555 90.63 606 reject_vc 4 ALIGNMENT 377 YS2-13a14.p1k vc_3 555 1 1203 1749 C 555 90.63 606 reject_vc 5 ALIGNMENT 910 YS2-13a15.p1k chr13 1101 53 220145 221183 C 1049 96.66 1206 accept 0 ALIGNMENT 1026 YS2-13a15.q1k chr13 38 1257 218304 219526 F 1220 95.33 1340 accept 0 ALIGNMENT 155 YS2-13a16.p1k vc_6 195 27 5744 5912 C 169 98.82 209 reject_vc 1 ALIGNMENT 155 YS2-13a16.p1k scplasm1 195 27 6051 6219 C 169 98.82 209 accept 0 ALIGNMENT 1001 YS2-13a17.p1k chr09 64 1202 260907 262044 F 1139 97.37 1210 accept 0 ALIGNMENT 1050 YS2-13a17.q1k chr09 1239 38 262634 263840 C 1202 96.67 1337 accept 0 ALIGNMENT 985 YS2-13a20.q1k chr16 1196 41 190412 191587 C 1156 96.54 1370 accept 0 ALIGNMENT 990 YS2-13a20.p1k chr16 24 1134 186097 187200 F 1111 97.57 1224 accept 0 ALIGNMENT 36 YS2-13a21.q1k vc_5 396 361 1 36 C 36 100.00 399 reject_low 8 ALIGNMENT 41 YS2-13a21.q1k vc_4 359 399 5831 5871 F 41 100.00 399 reject_low 5 ALIGNMENT 0 YS2-13a21.q1k chr15 359 399 494805 494804 F 41 0.00 399 accept_chi 0 ALIGNMENT 41 YS2-13a21.q1k vc_2 399 359 2105 2145 C 41 100.00 399 reject_low 3 ALIGNMENT 0 YS2-13a21.q1k vc_4 102 358 5831 5830 F 257 0.00 399 reject_low 5 ALIGNMENT 0 YS2-13a21.q1k vc_7 102 361 13525 13524 F 260 0.00 399 reject_low 7 ALIGNMENT 41 YS2-13a21.q1k vc_1 399 359 2472 2512 C 41 100.00 399 reject_low 2 ALIGNMENT 290 YS2-13a21.p1k chr15 381 65 494488 494805 C 317 97.79 399 accept_chi 1 ALIGNMENT 0 YS2-13a21.p1k chr15 399 382 494489 494488 C 18 0.00 399 accept_chi 1 ALIGNMENT 0 YS2-13a21.q1k vc_5 360 102 5064 5063 C 259 0.00 399 reject_low 6 ALIGNMENT 41 YS2-13a21.q1k vc_3 399 359 2472 2512 C 41 100.00 399 reject_low 4 ALIGNMENT 304 YS2-13a21.q1k chr15 41 358 494488 494805 F 318 98.74 399 accept_chi 0 ALIGNMENT 39 YS2-13a21.q1k vc_5 399 361 5025 5063 C 39 100.00 399 reject_low 6 ALIGNMENT 0 YS2-13a21.q1k vc_1 358 102 2513 2512 C 257 0.00 399 reject_low 2 ALIGNMENT 38 YS2-13a21.q1k vc_7 362 399 13525 13562 F 38 100.00 399 reject_low 7 ALIGNMENT 0 YS2-13a21.q1k vc_2 358 102 2146 2145 C 257 0.00 399 reject_low 3 ALIGNMENT 0 YS2-13a21.q1k vc_3 358 102 2513 2512 C 257 0.00 399 reject_low 4 ALIGNMENT 0 YS2-13a21.q1k vc_5 360 102 37 36 C 259 0.00 399 reject_low 8 ALIGNMENT 1008 YS2-13a22.q1k chr14 1185 34 761214 762376 C 1152 96.61 1342 accept_chi 0 ALIGNMENT 632 YS2-13a22.p1k chr11 70 993 205513 206418 F 924 91.56 1284 accept_chi 1 ALIGNMENT 874 YS2-13b02.p1k chr08 1200 36 272259 273407 C 1165 92.70 1206 accept 0 ALIGNMENT 1052 YS2-13b02.q1k chr08 38 1259 268381 269615 F 1222 96.07 1386 accept 0 ALIGNMENT 118 YS2-13b03.q1k chr12 842 960 472464 472582 F 119 99.16 1375 reject_low 5 ALIGNMENT 1009 YS2-13b03.q1k chr12 41 1176 458874 460016 F 1136 97.89 1375 accept_chi 1 ALIGNMENT 0 YS2-13b03.q1k chr06 474 62 31730 31729 C 413 0.00 1375 reject_low 3 ALIGNMENT 118 YS2-13b03.q1k chr12 842 960 485696 485814 F 119 99.16 1375 reject_low 7 ALIGNMENT 998 YS2-13b03.p1k chr09 1225 39 127973 129165 C 1187 94.95 1228 accept_chi 0 ALIGNMENT 119 YS2-13b03.q1k chr12 842 961 489348 489467 F 120 99.17 1375 reject_low 4 ALIGNMENT 0 YS2-13b03.q1k chr06 894 583 31623 31622 C 312 0.00 1375 reject_low 3 ALIGNMENT 0 YS2-13b03.q1k chr12 62 841 482044 482043 F 780 0.00 1375 reject_low 6 ALIGNMENT 887 YS2-13b03.q1k chr12 41 960 468011 468930 F 920 99.89 1375 reject_low 2 ALIGNMENT 0 YS2-13b03.q1k chr12 62 841 472464 472463 F 780 0.00 1375 reject_low 5 ALIGNMENT 94 YS2-13b03.q1k chr06 582 475 31622 31729 C 108 98.15 1375 reject_low 3 ALIGNMENT 118 YS2-13b03.q1k chr12 842 960 482044 482162 F 119 99.16 1375 reject_low 6 ALIGNMENT 0 YS2-13b03.q1k chr12 62 841 489348 489347 F 780 0.00 1375 reject_low 4 ALIGNMENT 0 YS2-13b03.q1k chr12 62 841 485696 485695 F 780 0.00 1375 reject_low 7 ALIGNMENT 579 YS2-13b04.p1k chr10 33 1065 16783 17817 F 1033 86.06 1200 reject_low 3 ALIGNMENT 0 YS2-13b04.q1k chr07 146 62 1071338 1071337 C 85 0.00 1406 accept 0 ALIGNMENT 82 YS2-13b04.q1k chr07 449 147 1071035 1071337 C 303 75.91 1406 accept 0 ALIGNMENT 0 YS2-13b04.q1k chr02 1009 943 800678 800744 C 67 0.00 1406 reject_low 6 ALIGNMENT 0 YS2-13b04.q1k chr02 643 62 801044 801043 C 582 0.00 1406 reject_low 6 ALIGNMENT 0 YS2-13b04.q1k chr07 836 450 1071036 1071035 C 387 0.00 1406 accept 0 ALIGNMENT 1021 YS2-13b04.p1k chr07 32 1184 1067243 1068407 F 1153 97.05 1200 accept 0 ALIGNMENT 561 YS2-13b04.p1k chr09 104 1174 16872 17951 F 1071 85.06 1200 reject_low 4 ALIGNMENT 174 YS2-13b04.q1k chr06 924 36 28463 29351 C 889 73.79 1406 reject_low 5 ALIGNMENT 366 YS2-13b04.q1k chr16 1156 42 931386 932501 C 1115 77.85 1406 reject_low 1 ALIGNMENT 606 YS2-13b04.p1k chr15 33 1174 22540 23691 F 1142 85.38 1200 reject_low 2 ALIGNMENT 0 YS2-13b04.p1k chr09 62 103 16872 16871 F 42 0.00 1200 reject_low 4 ALIGNMENT 34 YS2-13b04.q1k chr02 1149 1010 800538 800677 C 140 72.86 1406 reject_low 6 ALIGNMENT 0 YS2-13b04.q1k chr06 1096 925 28306 28462 C 172 0.00 1406 reject_low 5 ALIGNMENT 47 YS2-13b04.q1k chr02 942 644 800745 801043 C 299 72.58 1406 reject_low 6 ALIGNMENT 32 YS2-13b04.q1k chr06 1149 1097 28253 28305 C 53 86.79 1406 reject_low 5 ALIGNMENT 988 YS2-13b05.q1k chr14 29 1232 297198 298409 F 1204 95.51 1386 accept 0 ALIGNMENT 1027 YS2-13b05.p1k chr14 1229 31 300805 302007 C 1199 96.00 1231 accept 0 ALIGNMENT 0 YS2-13b06.p1k chrm 630 55 84215 84214 C 576 0.00 630 reject_low 7 ALIGNMENT 0 YS2-13b06.q1k chrm 62 561 84193 84192 F 500 0.00 622 reject_low 7,10 ALIGNMENT 0 YS2-13b06.p1k chrm 630 86 2553 2552 C 545 0.00 630 reject_low 6 ALIGNMENT 29 YS2-13b06.q1k chrm 593 622 84214 84243 F 30 100.00 622 reject_low 10 ALIGNMENT 58 YS2-13b06.p1k chrm 85 23 2552 2614 C 63 98.41 630 reject_low 6 ALIGNMENT 0 YS2-13b06.p1k chrm 630 288 68407 68406 C 343 0.00 630 accept 0 ALIGNMENT 0 YS2-13b06.p1k chrm 96 630 34252 34251 F 535 0.00 630 reject_low 3 ALIGNMENT 0 YS2-13b06.p1k chrm 94 630 40443 40442 F 537 0.00 630 reject_low 4 ALIGNMENT 0 YS2-13b06.p1k chrm 630 612 68142 68141 C 19 0.00 630 reject_low 1 ALIGNMENT 23 YS2-13b06.q1k chrm 562 585 84193 84216 F 24 100.00 622 reject_low 7,10 ALIGNMENT 0 YS2-13b06.q1k chrm 553 62 40444 40443 C 492 0.00 622 reject_low 3,4 ALIGNMENT 185 YS2-13b06.p1k chrm 287 24 68406 68673 C 264 96.21 630 accept 0 reject_low 1 ALIGNMENT 213 YS2-13b06.p1k chrm 611 324 68141 68429 C 288 99.31 630 reject_low 1 ALIGNMENT 0 YS2-13b06.q1k chrm 586 622 84216 84215 F 37 0.00 622 reject_low 7 ALIGNMENT 48 YS2-13b06.p1k chrm 24 95 34186 34252 F 72 93.06 630 reject_low 3 ALIGNMENT 0 YS2-13b06.q1k chrm 62 585 31190 31189 F 524 0.00 622 reject_low 8 ALIGNMENT 39 YS2-13b06.q1k chrm 622 554 40380 40443 C 69 89.86 622 reject_low 3,4 ALIGNMENT 0 YS2-13b06.q1k chrm 324 622 68429 68428 F 299 0.00 622 accept 0 ALIGNMENT 213 YS2-13b06.q1k chrm 36 323 68141 68429 F 288 99.31 622 accept 0 ALIGNMENT 30 YS2-13b06.p1k chrm 54 23 84214 84245 C 32 100.00 630 reject_low 7 ALIGNMENT 0 YS2-13b06.q1k chrm 586 592 84217 84213 F 7 0.00 622 reject_low 10 ALIGNMENT 27 YS2-13b06.q1k chrm 586 621 31190 31224 F 36 94.44 622 reject_low 8 ALIGNMENT 0 YS2-13b06.q1k chrm 62 561 2552 2551 F 500 0.00 622 reject_low 5 ALIGNMENT 0 YS2-13b06.p1k chrm 630 62 62521 62520 C 569 0.00 630 reject_low 9 ALIGNMENT 39 YS2-13b06.p1k chrm 23 93 40378 40443 F 71 90.14 630 reject_low 4 ALIGNMENT 0 YS2-13b06.q1k chrm 62 359 68406 68405 F 298 0.00 622 reject_low 2 ALIGNMENT 59 YS2-13b06.q1k chrm 562 622 2552 2612 F 61 100.00 622 reject_low 5 ALIGNMENT 185 YS2-13b06.q1k chrm 360 622 68406 68672 F 263 96.58 622 reject_low 2 ALIGNMENT 0 YS2-13b06.p1k chrm 323 288 68430 68405 C 36 0.00 630 reject_low 1 ALIGNMENT 24 YS2-13b06.p1k chrm 61 24 62520 62559 C 38 89.47 630 reject_low 9 ALIGNMENT 979 YS2-13b07.p1k chr05 25 1189 79886 81056 F 1165 95.36 1199 accept 0 ALIGNMENT 1035 YS2-13b07.q1k chr05 1246 40 83185 84393 C 1207 94.78 1441 accept 0 ALIGNMENT 972 YS2-13b08.p1k chr11 31 1217 149139 150321 F 1187 94.69 1217 accept 0 ALIGNMENT 1051 YS2-13b08.q1k chr11 1232 30 153331 154550 C 1203 96.67 1416 accept 0 ALIGNMENT 69 YS2-13b09.q1k chr12 135 29 458677 458793 C 107 90.65 1309 reject_bad_break 1 ALIGNMENT 784 YS2-13b09.q1k chr12 1080 164 466903 467824 C 917 96.62 1309 reject_bad_break 2 ALIGNMENT 69 YS2-13b09.q1k chr12 135 29 467814 467930 C 107 90.65 1309 reject_bad_break 2 ALIGNMENT 1070 YS2-13b09.p1k chr10 1221 27 679180 680382 C 1195 97.32 1221 accept_chi 0 ALIGNMENT 784 YS2-13b09.q1k chr12 1080 164 457766 458687 C 917 96.62 1309 reject_bad_break 1 ALIGNMENT 0 YS2-13b09.q1k chr12 163 136 458688 458676 C 28 0.00 1309 reject_bad_break 1 ALIGNMENT 0 YS2-13b09.q1k chr12 163 136 467825 467813 C 28 0.00 1309 reject_bad_break 2 ALIGNMENT 41 YS2-13b10.q1k vc_1 297 257 2472 2512 C 41 100.00 297 reject_low 2 ALIGNMENT 0 YS2-13b10.q1k vc_4 62 256 5831 5830 F 195 0.00 297 reject_low 4 ALIGNMENT 36 YS2-13b10.q1k vc_5 294 259 1 36 C 36 100.00 297 reject_low 7 ALIGNMENT 0 YS2-13b10.q1k vc_5 258 62 5064 5063 C 197 0.00 297 reject_low 5 ALIGNMENT 41 YS2-13b10.q1k vc_4 257 297 5831 5871 F 41 100.00 297 reject_low 4 ALIGNMENT 39 YS2-13b10.q1k vc_5 297 259 5025 5063 C 39 100.00 297 reject_low 5 ALIGNMENT 212 YS2-13b10.p1k chr08 31 257 18262 18488 F 227 99.12 276 ambiguous_tel 0 ALIGNMENT 0 YS2-13b10.p1k chr08 258 276 18488 18487 F 19 0.00 276 ambiguous_tel 0 ALIGNMENT 41 YS2-13b10.q1k vc_3 297 257 2472 2512 C 41 100.00 297 reject_low 3 ALIGNMENT 0 YS2-13b10.q1k chr08 297 257 18261 18260 C 41 0.00 297 ambiguous_tel 1 ALIGNMENT 0 YS2-13b10.q1k vc_3 256 62 2513 2512 C 195 0.00 297 reject_low 3 ALIGNMENT 38 YS2-13b10.q1k vc_7 260 297 13525 13562 F 38 100.00 297 reject_low 6 ALIGNMENT 0 YS2-13b10.q1k vc_1 256 62 2513 2512 C 195 0.00 297 reject_low 2 ALIGNMENT 0 YS2-13b10.q1k vc_7 62 259 13525 13524 F 198 0.00 297 reject_low 6 ALIGNMENT 0 YS2-13b10.q1k vc_5 258 62 37 36 C 197 0.00 297 reject_low 7 ALIGNMENT 211 YS2-13b10.q1k chr08 256 30 18260 18486 C 227 99.12 297 ambiguous_tel 1 ALIGNMENT 1066 YS2-13b11.p1k chr03 35 1224 248377 249567 F 1190 97.06 1225 accept 0 ALIGNMENT 974 YS2-13b11.q1k chr03 1097 39 248859 249931 C 1059 97.73 1336 accept 0 ALIGNMENT 38 YS2-13b12.q1k vc_7 304 341 13525 13562 F 38 100.00 341 reject_low 6 ALIGNMENT 0 YS2-13b12.q1k vc_5 302 62 37 36 C 241 0.00 341 reject_low 7 ALIGNMENT 271 YS2-13b12.p1k chr12 301 30 461712 461983 C 272 100.00 305 accept 1 ALIGNMENT 0 YS2-13b12.q1k vc_5 302 62 5064 5063 C 241 0.00 341 reject_low 5 ALIGNMENT 272 YS2-13b12.q1k chr12 29 301 461711 461983 F 273 100.00 341 accept 1 ALIGNMENT 36 YS2-13b12.q1k vc_5 338 303 1 36 C 36 100.00 341 reject_low 7 ALIGNMENT 271 YS2-13b12.p1k chr12 301 30 452575 452846 C 272 100.00 305 accept 0 ALIGNMENT 0 YS2-13b12.q1k vc_7 62 303 13525 13524 F 242 0.00 341 reject_low 6 ALIGNMENT 0 YS2-13b12.q1k vc_1 300 62 2513 2512 C 239 0.00 341 reject_low 2 ALIGNMENT 41 YS2-13b12.q1k vc_4 301 341 5831 5871 F 41 100.00 341 reject_low 4 ALIGNMENT 0 YS2-13b12.q1k vc_4 62 300 5831 5830 F 239 0.00 341 reject_low 4 ALIGNMENT 39 YS2-13b12.q1k vc_5 341 303 5025 5063 C 39 100.00 341 reject_low 5 ALIGNMENT 41 YS2-13b12.q1k vc_3 341 301 2472 2512 C 41 100.00 341 reject_low 3 ALIGNMENT 0 YS2-13b12.q1k chr12 302 341 452846 452845 F 40 0.00 341 accept 0 ALIGNMENT 272 YS2-13b12.q1k chr12 29 301 452574 452846 F 273 100.00 341 accept 0 ALIGNMENT 0 YS2-13b12.q1k vc_3 300 62 2513 2512 C 239 0.00 341 reject_low 3 ALIGNMENT 41 YS2-13b12.q1k vc_1 341 301 2472 2512 C 41 100.00 341 reject_low 2 ALIGNMENT 0 YS2-13b12.q1k chr12 302 341 461983 461982 F 40 0.00 341 accept 1 ALIGNMENT 1016 YS2-13b14.p1k chr08 33 1219 250572 251770 F 1187 95.70 1247 accept 0 ALIGNMENT 894 YS2-13b14.q1k chr08 1116 45 254244 255330 C 1072 95.99 1349 accept 0 ALIGNMENT 1016 YS2-13b15.p1k chr12 31 1228 1010191 1011382 F 1198 95.41 1241 accept 0 ALIGNMENT 994 YS2-13b15.q1k chr12 1191 39 1013838 1015004 C 1153 95.92 1374 accept 0 ALIGNMENT 21 YS2-13b15.p1k chr12 1017 996 1011155 1011176 C 22 100.00 1241 reject_low 1 ALIGNMENT 0 YS2-13b15.p1k chr12 995 62 1011177 1011176 C 934 0.00 1241 reject_low 1 ALIGNMENT 983 YS2-13b16.q1k chr12 1168 38 1013858 1015004 C 1131 96.11 1388 accept 0 ALIGNMENT 1009 YS2-13b16.p1k chr12 29 1117 1010191 1011275 F 1089 98.26 1261 accept 0 ALIGNMENT 947 YS2-13b19.q1k chr04 33 1054 197030 198060 F 1022 97.85 1314 accept 0 ALIGNMENT 1015 YS2-13b19.p1k chr04 1218 37 201409 202591 C 1182 96.62 1222 accept 0 ALIGNMENT 0 YS2-13b20.p1k chr08 493 528 552978 552977 F 36 0.00 528 reject_low 6 ALIGNMENT 199 YS2-13b20.p1k chr01 24 492 225862 226330 F 469 81.02 528 reject_low 5 ALIGNMENT 278 YS2-13b20.q1k vc_3 1 295 2689 2986 F 295 98.31 648 reject_vc 9 ALIGNMENT 223 YS2-13b20.q1k vc_7 295 53 4927 5172 C 243 97.53 648|0,1 reject_vc 10 ALIGNMENT 0 YS2-13b20.p1k chr02 528 512 428198 428197 C 17 0.00 528 accept 0 ALIGNMENT 331 YS2-13b20.q1k vc_4 413 1 5232 5654 C 413 93.95 648 reject_vc 3 ALIGNMENT 57 YS2-13b20.q1k vc_7 413 302 4583 4699 C 112 85.71 648 reject_vc 10 ALIGNMENT 87 YS2-13b20.q1k vc_4 305 517 1879 2105 F 213 83.10 648 reject_vc 11 ALIGNMENT 50 YS2-13b20.q1k vc_4 295 236 6279 6339 C 60 95.00 648 reject_low 13 ALIGNMENT 0 YS2-13b20.p1k chr01 493 528 226330 226329 F 36 0.00 528 reject_low 5 ALIGNMENT 0 YS2-13b20.q1k vc_4 62 235 1548 1547 F 174 0.00 648 reject_vc 11 ALIGNMENT 0 YS2-13b20.p1k chr02 528 480 430080 430079 C 49 0.00 528 reject_low 4 ALIGNMENT 50 YS2-13b20.q1k vc_4 295 236 52 112 C 60 95.00 648 reject_low 12 ALIGNMENT 0 YS2-13b20.q1k vc_7 301 296 4700 4926 C 6 0.00 648 reject_vc 10 ALIGNMENT 372 YS2-13b20.q1k vc_7 517 1 2036 2569 C 517 91.68 648 reject_vc 2 ALIGNMENT 222 YS2-13b20.p1k chr02 479 24 430079 430534 C 456 83.11 528 reject_low 4 ALIGNMENT 0 YS2-13b20.q1k vc_4 235 62 6340 6339 C 174 0.00 648 reject_low 13 ALIGNMENT 199 YS2-13b20.p1k chr08 24 492 552510 552978 F 469 81.02 528 reject_low 6 ALIGNMENT 51 YS2-13b20.q1k vc_7 54 3 6360 6411 C 52 100.00 648|1,0 reject_vc 10 ALIGNMENT 278 YS2-13b20.q1k vc_2 1 295 2322 2619 F 295 98.31 648 reject_vc 8 ALIGNMENT 278 YS2-13b20.q1k vc_1 1 295 2689 2986 F 295 98.31 648 reject_vc 7 ALIGNMENT 0 YS2-13b20.q1k vc_7 53 54 5172 6360 C 0 0.00 648 reject_vc 10 ALIGNMENT 0 YS2-13b20.q1k vc_4 296 304 1609 1878 F 9 0.00 648 reject_vc 11 ALIGNMENT 0 YS2-13b20.q1k vc_4 235 62 113 112 C 174 0.00 648 reject_low 12 ALIGNMENT 50 YS2-13b20.q1k vc_4 236 295 1548 1608 F 60 95.00 648 reject_vc 11 ALIGNMENT 484 YS2-13b20.p1k chr02 511 22 428197 428686 C 490 99.80 528 accept 0 ALIGNMENT 372 YS2-13b20.q1k vc_5 1 517 2556 3089 F 517 91.68 648 reject_vc 1 ALIGNMENT 1004 YS2-13b21.q1k chr16 37 1164 133739 134882 F 1128 97.25 1316 accept 0 ALIGNMENT 1015 YS2-13b21.p1k chr16 1165 29 137143 138285 C 1137 97.27 1165 accept 0 ALIGNMENT 44 YS2-13b23.q1k chr12 943 878 458613 458678 C 66 89.39 1246 reject_bad_break 0 ALIGNMENT 660 YS2-13b23.q1k chr12 841 31 458677 459496 C 811 95.44 1246 reject_bad_break 0 ALIGNMENT 0 YS2-13b23.q1k chr12 877 842 467816 467813 C 36 0.00 1246 reject_bad_break 1 ALIGNMENT 44 YS2-13b23.q1k chr12 943 878 467750 467815 C 66 89.39 1246 reject_bad_break 1 ALIGNMENT 20 YS2-13b23.q1k chr12 1015 947 458546 458619 C 69 79.71 1246 reject_bad_break 0 ALIGNMENT 20 YS2-13b23.q1k chr12 1015 947 467683 467756 C 69 79.71 1246 reject_bad_break 1 ALIGNMENT 0 YS2-13b23.q1k chr06 219 636 31729 31728 F 418 0.00 1246 reject_low 2 ALIGNMENT 86 YS2-13b23.q1k chr06 111 218 31622 31729 F 108 95.37 1246 reject_low 2 ALIGNMENT 660 YS2-13b23.q1k chr12 841 31 467814 468633 C 811 95.44 1246 reject_bad_break 1 ALIGNMENT 0 YS2-13b23.q1k chr12 877 842 458679 458676 C 36 0.00 1246 reject_bad_break 0 ALIGNMENT 0 YS2-13b23.q1k chr12 946 944 458620 458612 C 3 0.00 1246 reject_bad_break 0 ALIGNMENT 752 YS2-13b23.p1k chr12 282 1216 462557 463496 F 935 94.12 1220 reject_bad_break 1 ALIGNMENT 0 YS2-13b23.q1k chr12 946 944 467757 467749 C 3 0.00 1246 reject_bad_break 1 ALIGNMENT 752 YS2-13b23.p1k chr12 282 1216 453420 454359 F 935 94.12 1220 reject_bad_break 0 ALIGNMENT 915 YS2-13b24.p1k chr01 997 28 62699 63667 C 970 98.56 1183 accept 0 ALIGNMENT 20 YS2-13c01.q1k chr02 908 937 780436 780465 F 30 93.33 1312 reject_low 2 ALIGNMENT 0 YS2-13c01.q1k chr02 62 907 780436 780435 F 846 0.00 1312 reject_low 2 ALIGNMENT 965 YS2-13c01.q1k chr04 1123 30 1055877 1056984 C 1094 96.89 1312 accept_chi 1 ALIGNMENT 1006 YS2-13c01.p1k chr12 1200 62 889410 890540 C 1139 97.28 1206 accept_chi 0 ALIGNMENT 1026 YS2-13c02.p1k chr10 1217 38 49678 50866 C 1180 96.36 1217 accept 0 ALIGNMENT 989 YS2-13c02.q1k chr10 31 1138 46346 47463 F 1108 97.47 1358 accept 0 ALIGNMENT 337 YS2-13c04.q1k vc_4 422 1 5232 5654 C 422 94.08 727 reject_vc 3 ALIGNMENT 83 YS2-13c04.q1k vc_4 309 564 1882 2142 F 256 79.69 727 reject_vc 8 ALIGNMENT 0 YS2-13c04.p1k chrm 528 511 45742 45741 C 18 0.00 528 accept 0 ALIGNMENT 0 YS2-13c04.q1k vc_4 236 62 6340 6339 C 175 0.00 727 reject_low 10 ALIGNMENT 55 YS2-13c04.q1k vc_4 300 237 48 112 C 64 96.88 727 reject_low 9 ALIGNMENT 230 YS2-13c04.q1k vc_7 300 53 4923 5172 C 248 97.98 727|0,1 reject_vc 7 ALIGNMENT 371 YS2-13c04.q1k vc_5 1 564 2556 3126 F 564 89.72 727 reject_vc 1 ALIGNMENT 0 YS2-13c04.q1k vc_7 53 54 5172 6360 C 0 0.00 727 reject_vc 7 ALIGNMENT 284 YS2-13c04.q1k vc_2 1 300 2322 2623 F 300 98.67 727 reject_vc 5 ALIGNMENT 0 YS2-13c04.q1k vc_7 302 301 4700 4922 C 2 0.00 727 reject_vc 7 ALIGNMENT 0 YS2-13c04.q1k vc_4 236 62 113 112 C 175 0.00 727 reject_low 9 ALIGNMENT 284 YS2-13c04.q1k vc_1 1 300 2689 2990 F 300 98.67 727 reject_vc 4 ALIGNMENT 237 YS2-13c04.p1k chrm 510 31 45741 46198 C 480 93.96 528 accept 0 ALIGNMENT 371 YS2-13c04.q1k vc_7 564 1 1999 2569 C 564 89.54 727 reject_vc 2 ALIGNMENT 55 YS2-13c04.q1k vc_4 300 237 6275 6339 C 64 96.88 727 reject_low 10 ALIGNMENT 59 YS2-13c04.q1k vc_7 422 303 4583 4699 C 120 85.00 727 reject_vc 7 ALIGNMENT 51 YS2-13c04.q1k vc_7 54 3 6360 6411 C 52 100.00 727|1,0 reject_vc 7 ALIGNMENT 284 YS2-13c04.q1k vc_3 1 300 2689 2990 F 300 98.67 727 reject_vc 6 ALIGNMENT 0 YS2-13c04.q1k vc_4 301 308 1613 1881 F 8 0.00 727 reject_vc 8 ALIGNMENT 55 YS2-13c04.q1k vc_4 237 300 1548 1612 F 64 96.88 727 reject_vc 8 ALIGNMENT 0 YS2-13c04.q1k vc_4 62 236 1548 1547 F 175 0.00 727 reject_vc 8 ALIGNMENT 39 YS2-13c05.q1k vc_5 290 252 5025 5063 C 39 100.00 290 reject_low 6 ALIGNMENT 0 YS2-13c05.q1k vc_5 251 62 5064 5063 C 190 0.00 290 reject_low 6 ALIGNMENT 38 YS2-13c05.q1k vc_7 253 290 13525 13562 F 38 100.00 290 reject_low 7 ALIGNMENT 0 YS2-13c05.q1k vc_1 249 62 2513 2512 C 188 0.00 290 reject_low 2 ALIGNMENT 41 YS2-13c05.q1k vc_1 290 250 2472 2512 C 41 100.00 290 reject_low 2 ALIGNMENT 41 YS2-13c05.q1k vc_3 290 250 2472 2512 C 41 100.00 290 reject_low 4 ALIGNMENT 0 YS2-13c05.q1k chr14 290 252 755764 755763 C 39 0.00 290 ambiguous_tel 0 ALIGNMENT 41 YS2-13c05.q1k vc_2 290 250 2105 2145 C 41 100.00 290 reject_low 3 ALIGNMENT 0 YS2-13c05.q1k vc_7 62 252 13525 13524 F 191 0.00 290 reject_low 7 ALIGNMENT 0 YS2-13c05.q1k vc_4 62 249 5831 5830 F 188 0.00 290 reject_low 5 ALIGNMENT 203 YS2-13c05.q1k chr14 251 38 755763 755976 C 214 98.60 290 ambiguous_tel 0 ALIGNMENT 0 YS2-13c05.q1k vc_2 249 62 2146 2145 C 188 0.00 290 reject_low 3 ALIGNMENT 0 YS2-13c05.q1k vc_5 251 62 37 36 C 190 0.00 290 reject_low 8 ALIGNMENT 41 YS2-13c05.q1k vc_4 250 290 5831 5871 F 41 100.00 290 reject_low 5 ALIGNMENT 195 YS2-13c05.p1k chr14 64 273 755766 755976 F 210 98.10 292 ambiguous_tel 1 ALIGNMENT 0 YS2-13c05.p1k chr14 274 292 755976 755975 F 19 0.00 292 ambiguous_tel 1 ALIGNMENT 36 YS2-13c05.q1k vc_5 287 252 1 36 C 36 100.00 290 reject_low 8 ALIGNMENT 0 YS2-13c05.q1k vc_3 249 62 2513 2512 C 188 0.00 290 reject_low 4 ALIGNMENT 41 YS2-13c06.q1k vc_3 339 299 2472 2512 C 41 100.00 339 reject_low 4 ALIGNMENT 0 YS2-13c06.q1k vc_5 300 62 37 36 C 239 0.00 339 reject_low 8 ALIGNMENT 36 YS2-13c06.q1k vc_5 336 301 1 36 C 36 100.00 339 reject_low 8 ALIGNMENT 0 YS2-13c06.q1k chr06 339 300 226833 226832 C 40 0.00 339 accept_chi 0 ALIGNMENT 39 YS2-13c06.q1k vc_5 339 301 5025 5063 C 39 100.00 339 reject_low 6 ALIGNMENT 41 YS2-13c06.q1k vc_1 339 299 2472 2512 C 41 100.00 339 reject_low 2 ALIGNMENT 246 YS2-13c06.q1k chr06 299 40 226832 227090 C 260 99.23 339 accept_chi 0 ALIGNMENT 0 YS2-13c06.q1k vc_7 62 301 13525 13524 F 240 0.00 339 reject_low 7 ALIGNMENT 0 YS2-13c06.q1k vc_1 298 62 2513 2512 C 237 0.00 339 reject_low 2 ALIGNMENT 38 YS2-13c06.q1k vc_7 302 339 13525 13562 F 38 100.00 339 reject_low 7 ALIGNMENT 41 YS2-13c06.q1k vc_2 339 299 2105 2145 C 41 100.00 339 reject_low 3 ALIGNMENT 0 YS2-13c06.q1k vc_3 298 62 2513 2512 C 237 0.00 339 reject_low 4 ALIGNMENT 0 YS2-13c06.q1k vc_2 298 62 2146 2145 C 237 0.00 339 reject_low 3 ALIGNMENT 0 YS2-13c06.q1k vc_5 300 62 5064 5063 C 239 0.00 339 reject_low 6 ALIGNMENT 0 YS2-13c06.q1k vc_4 62 298 5831 5830 F 237 0.00 339 reject_low 5 ALIGNMENT 41 YS2-13c06.q1k vc_4 299 339 5831 5871 F 41 100.00 339 reject_low 5 ALIGNMENT 0 YS2-13c06.p1k chr06 316 332 227090 227089 F 17 0.00 332 accept_chi 1 ALIGNMENT 241 YS2-13c06.p1k chr06 57 315 226832 227090 F 259 98.84 332 accept_chi 1 ALIGNMENT 648 YS2-13c07.p1k chr12 1099 32 459811 460907 C 1068 89.70 1228 accept 0 ALIGNMENT 984 YS2-13c07.q1k chr12 42 1250 455077 456282 F 1209 95.04 1389 accept 0 ALIGNMENT 0 YS2-13c07.p1k chr12 782 368 451420 451419 C 415 0.00 1228 reject_low 2 ALIGNMENT 232 YS2-13c07.p1k chr12 367 32 451419 451770 C 336 91.96 1228 reject_low 2 ALIGNMENT 984 YS2-13c07.q1k chr12 42 1250 464214 465419 F 1209 95.04 1389 reject_low 1 ALIGNMENT 1028 YS2-13c08.p1k chr16 1209 30 246789 247977 C 1180 96.61 1228 accept_chi 0 ALIGNMENT 1014 YS2-13c08.q1k chr08 29 1215 258691 259895 F 1187 96.63 1399 accept_chi 1 ALIGNMENT 928 YS2-13c10.p1k chr08 1053 28 239176 240192 C 1026 97.66 1295 accept 0 ALIGNMENT 970 YS2-13c10.q1k chr08 29 1023 239174 240170 F 995 99.50 1394 accept 0 ALIGNMENT 861 YS2-13c11.p1k chr12 52 1026 704981 705948 F 975 97.54 1217 accept 0 ALIGNMENT 940 YS2-13c11.q1k chr12 1133 28 704990 706089 C 1106 96.56 1404 accept 0 ALIGNMENT 966 YS2-13c12.p1k chr09 56 1214 293658 294821 F 1159 96.55 1231 accept 0 ALIGNMENT 1024 YS2-13c12.q1k chr09 1273 27 293667 294925 C 1247 96.39 1409 accept 0 ALIGNMENT 909 YS2-13c13.q1k chr07 1164 39 714827 715959 C 1126 94.94 1349 accept 0 ALIGNMENT 922 YS2-13c13.p1k chr07 65 1213 704878 706017 F 1149 95.74 1216 accept 0 ALIGNMENT 0 YS2-13c14.q1k vc_1 405 62 2513 2512 C 344 0.00 446 reject_low 2 ALIGNMENT 0 YS2-13c14.q1k vc_5 407 62 37 36 C 346 0.00 446 reject_low 8 ALIGNMENT 41 YS2-13c14.q1k vc_2 446 406 2105 2145 C 41 100.00 446 reject_low 3 ALIGNMENT 41 YS2-13c14.q1k vc_3 446 406 2472 2512 C 41 100.00 446 reject_low 4 ALIGNMENT 0 YS2-13c14.q1k vc_3 405 62 2513 2512 C 344 0.00 446 reject_low 4 ALIGNMENT 0 YS2-13c14.q1k chr15 446 406 15626 15625 C 41 0.00 446 ambiguous_tel 1 ALIGNMENT 38 YS2-13c14.q1k vc_7 409 446 13525 13562 F 38 100.00 446 reject_low 7 ALIGNMENT 41 YS2-13c14.q1k vc_4 406 446 5831 5871 F 41 100.00 446 reject_low 5 ALIGNMENT 0 YS2-13c14.q1k vc_5 407 62 5064 5063 C 346 0.00 446 reject_low 6 ALIGNMENT 36 YS2-13c14.q1k vc_5 443 408 1 36 C 36 100.00 446 reject_low 8 ALIGNMENT 0 YS2-13c14.q1k vc_4 62 405 5831 5830 F 344 0.00 446 reject_low 5 ALIGNMENT 0 YS2-13c14.p1k chr15 396 414 15990 15989 F 19 0.00 414 ambiguous_tel 0 ALIGNMENT 349 YS2-13c14.p1k chr15 30 395 15625 15990 F 366 99.18 414 ambiguous_tel 0 ALIGNMENT 0 YS2-13c14.q1k vc_2 405 62 2146 2145 C 344 0.00 446 reject_low 3 ALIGNMENT 41 YS2-13c14.q1k vc_1 446 406 2472 2512 C 41 100.00 446 reject_low 2 ALIGNMENT 39 YS2-13c14.q1k vc_5 446 408 5025 5063 C 39 100.00 446 reject_low 6 ALIGNMENT 0 YS2-13c14.q1k vc_7 62 408 13525 13524 F 347 0.00 446 reject_low 7 ALIGNMENT 349 YS2-13c14.q1k chr15 405 40 15625 15990 C 366 99.18 446 ambiguous_tel 1 ALIGNMENT 934 YS2-13c15.p1k chr12 58 1202 322656 323781 F 1145 95.46 1227 accept 0 ALIGNMENT 949 YS2-13c15.q1k chr12 1198 40 326497 327673 C 1159 95.43 1330 accept 0 ALIGNMENT 0 YS2-13c16.p1k chr04 230 62 1504833 1504832 C 169 0.00 1250 reject_low 8 ALIGNMENT 32 YS2-13c16.p1k chr04 106 75 1504438 1504469 C 32 100.00 1250 reject_low 7 ALIGNMENT 0 YS2-13c16.p1k chr04 869 753 1503807 1503878 C 117 0.00 1250 reject_low 2 ALIGNMENT 0 YS2-13c16.p1k chr04 869 640 1503807 1503991 C 230 0.00 1250 reject_low 3,4,5 ALIGNMENT 145 YS2-13c16.p1k chr04 563 377 1504473 1504659 C 187 92.51 1250 reject_low 4 ALIGNMENT 34 YS2-13c16.p1k chr04 311 231 1504752 1504832 C 81 81.48 1250 reject_low 8 ALIGNMENT 0 YS2-13c16.p1k chr04 882 107 1504439 1504438 C 776 0.00 1250 reject_low 7 ALIGNMENT 413 YS2-13c16.p1k chr04 1247 435 1503427 1504196 C 813 87.21 1250 reject_low 1 ALIGNMENT 0 YS2-13c16.p1k chr04 566 564 1504065 1504262 C 3 0.00 1250 reject_low 3 ALIGNMENT 0 YS2-13c16.p1k chr04 146 106 1504470 1504648 C 41 0.00 1250 reject_low 2 ALIGNMENT 122 YS2-13c16.p1k chr04 353 205 1504068 1504216 C 149 93.96 1250 reject_low 5 ALIGNMENT 0 YS2-13c16.p1k chr04 204 143 1504217 1504437 C 62 0.00 1250 reject_low 5 ALIGNMENT 70 YS2-13c16.p1k chr04 961 870 1503714 1503806 C 92 94.57 1250 reject_low 2,3,4,5 ALIGNMENT 33 YS2-13c16.p1k chr04 141 106 1504649 1504684 C 36 97.22 1250 reject_low 6 ALIGNMENT 470 YS2-13c16.p1k chr04 752 147 1503879 1504469 C 606 93.73 1250 reject_low 2 ALIGNMENT 0 YS2-13c16.p1k chr04 566 564 1504065 1504472 C 3 0.00 1250 reject_low 4 ALIGNMENT 0 YS2-13c16.p1k chr04 882 142 1504650 1504649 C 741 0.00 1250 reject_low 6 ALIGNMENT 484 YS2-13c16.p1k chr04 1163 255 1503510 1504361 C 909 87.90 1250 accept 0 ALIGNMENT 0 YS2-13c16.p1k chr04 161 106 1504665 1504648 C 56 0.00 1250 reject_low 3 ALIGNMENT 53 YS2-13c16.p1k chr04 105 43 1504649 1504711 C 63 95.24 1250 accept 0 reject_low 1,2,3,4,5 ALIGNMENT 0 YS2-13c16.p1k chr04 254 143 1504362 1504437 C 112 0.00 1250 accept 0 ALIGNMENT 0 YS2-13c16.p1k chr04 566 354 1504065 1504067 C 213 0.00 1250 reject_low 5 ALIGNMENT 0 YS2-13c16.p1k chr04 882 312 1504753 1504752 C 571 0.00 1250 reject_low 8 ALIGNMENT 63 YS2-13c16.p1k chr04 639 567 1503992 1504064 C 73 95.89 1250 reject_low 3,4,5 ALIGNMENT 0 YS2-13c16.p1k chr04 105 62 1504685 1504684 C 44 0.00 1250 reject_low 6 ALIGNMENT 339 YS2-13c16.p1k chr04 563 162 1504263 1504664 C 402 94.78 1250 reject_low 3 ALIGNMENT 0 YS2-13c16.p1k chr04 376 106 1504660 1504648 C 271 0.00 1250 reject_low 4 ALIGNMENT 873 YS2-13c16.q1k chr04 31 1034 1499839 1500857 F 1004 97.71 1314 accept 0 ALIGNMENT 0 YS2-13c16.p1k chr04 110 106 1504470 1504648 C 5 0.00 1250 accept 0 reject_low 1,5 ALIGNMENT 32 YS2-13c16.p1k chr04 142 111 1504438 1504469 C 32 100.00 1250 accept 0 reject_low 1,5 ALIGNMENT 0 YS2-13c16.p1k chr04 434 143 1504197 1504437 C 292 0.00 1250 reject_low 1 ALIGNMENT 210 YS2-13c17.p1k vc_5 1038 748 4742 5025 C 291 92.78 1255 reject_low 6 ALIGNMENT 26 YS2-13c17.p1k vc_3 778 748 2441 2472 C 31 96.77 1255 reject_low 10 ALIGNMENT 210 YS2-13c17.p1k vc_4 748 1038 5871 6154 F 291 92.78 1255 reject_low 5 ALIGNMENT 210 YS2-13c17.p1k vc_7 748 1038 100 383 F 291 92.78 1255 reject_low 7 ALIGNMENT 0 YS2-13c17.p1k vc_3 747 137 2106 2105 C 611 0.00 1255 reject_low 4 ALIGNMENT 0 YS2-13c17.p1k vc_5 747 137 5026 5025 C 611 0.00 1255 reject_low 6 ALIGNMENT 590 YS2-13c17.p1k chr12 730 75 234063 234720 C 656 98.32 1255 accept_chi 1 ALIGNMENT 0 YS2-13c17.p1k vc_3 747 137 2473 2472 C 611 0.00 1255 reject_low 10 ALIGNMENT 616 YS2-13c17.q1k chr12 37 697 234063 234722 F 661 99.24 697 accept_chi 0 ALIGNMENT 210 YS2-13c17.p1k vc_7 748 1038 13562 13845 F 291 92.78 1255 reject_low 8 ALIGNMENT 0 YS2-13c17.p1k vc_1 747 137 2106 2105 C 611 0.00 1255 reject_low 2 ALIGNMENT 0 YS2-13c17.p1k vc_7 137 747 100 99 F 611 0.00 1255 reject_low 7 ALIGNMENT 210 YS2-13c17.p1k vc_1 1038 748 1822 2105 C 291 92.78 1255 reject_low 2 ALIGNMENT 210 YS2-13c17.p1k vc_2 1038 748 1822 2105 C 291 92.78 1255 reject_low 3 ALIGNMENT 0 YS2-13c17.p1k vc_4 137 747 5871 5870 F 611 0.00 1255 reject_low 5 ALIGNMENT 0 YS2-13c17.p1k vc_1 830 779 2442 2441 C 52 0.00 1255 reject_low 9 ALIGNMENT 0 YS2-13c17.p1k vc_2 747 137 2106 2105 C 611 0.00 1255 reject_low 3 ALIGNMENT 0 YS2-13c17.p1k vc_3 830 779 2442 2441 C 52 0.00 1255 reject_low 10 ALIGNMENT 210 YS2-13c17.p1k vc_3 1038 748 1822 2105 C 291 92.78 1255 reject_low 4 ALIGNMENT 0 YS2-13c17.p1k chr12 830 731 234064 234063 C 100 0.00 1255 accept_chi 1 ALIGNMENT 26 YS2-13c17.p1k vc_1 778 748 2441 2472 C 31 96.77 1255 reject_low 9 ALIGNMENT 0 YS2-13c17.p1k vc_7 137 747 13562 13561 F 611 0.00 1255 reject_low 8 ALIGNMENT 0 YS2-13c17.p1k vc_1 747 137 2473 2472 C 611 0.00 1255 reject_low 9 ALIGNMENT 1039 YS2-13c18.p1k chr11 1231 31 132773 133971 C 1201 96.34 1252 accept 0 ALIGNMENT 986 YS2-13c18.q1k chr11 30 1138 130681 131802 F 1109 97.29 1368 accept 0 ALIGNMENT 1035 YS2-13c19.q1k chr02 1269 31 593478 594731 C 1239 94.67 1341 accept 0 ALIGNMENT 874 YS2-13c19.p1k chr02 64 1098 593016 594041 F 1035 96.33 1208 accept 0 ALIGNMENT 0 YS2-13c20.q1k vc_3 293 62 2514 2513 C 232 0.00 335 reject_low 4 ALIGNMENT 0 YS2-13c20.q1k chr11 335 295 59094 59093 C 41 0.00 335 accept_chi 0 ALIGNMENT 38 YS2-13c20.q1k vc_7 298 335 13525 13562 F 38 100.00 335 reject_low 7 ALIGNMENT 0 YS2-13c20.q1k vc_2 293 62 2147 2146 C 232 0.00 335 reject_low 3 ALIGNMENT 42 YS2-13c20.q1k vc_3 335 294 2472 2513 C 42 100.00 335 reject_low 4 ALIGNMENT 229 YS2-13c20.p1k chr11 31 296 59093 59353 F 266 97.37 313 accept_chi 1 ALIGNMENT 36 YS2-13c20.q1k vc_5 332 297 1 36 C 36 100.00 335 reject_low 8 ALIGNMENT 42 YS2-13c20.q1k vc_1 335 294 2472 2513 C 42 100.00 335 reject_low 2 ALIGNMENT 0 YS2-13c20.q1k vc_5 296 62 37 36 C 235 0.00 335 reject_low 8 ALIGNMENT 0 YS2-13c20.p1k chr11 297 313 59353 59352 F 17 0.00 313 accept_chi 1 ALIGNMENT 0 YS2-13c20.q1k vc_1 293 62 2514 2513 C 232 0.00 335 reject_low 2 ALIGNMENT 0 YS2-13c20.q1k vc_5 296 62 5064 5063 C 235 0.00 335 reject_low 6 ALIGNMENT 42 YS2-13c20.q1k vc_4 294 335 5830 5871 F 42 100.00 335 reject_low 5 ALIGNMENT 42 YS2-13c20.q1k vc_2 335 294 2105 2146 C 42 100.00 335 reject_low 3 ALIGNMENT 0 YS2-13c20.q1k vc_4 62 293 5830 5829 F 232 0.00 335 reject_low 5 ALIGNMENT 39 YS2-13c20.q1k vc_5 335 297 5025 5063 C 39 100.00 335 reject_low 6 ALIGNMENT 249 YS2-13c20.q1k chr11 294 34 59093 59353 C 261 99.23 335 accept_chi 0 ALIGNMENT 0 YS2-13c20.q1k vc_7 62 297 13525 13524 F 236 0.00 335 reject_low 7 ALIGNMENT 39 YS2-13c21.q1k vc_5 276 238 5025 5063 C 39 100.00 276 reject_low 5 ALIGNMENT 185 YS2-13c21.q1k chr13 236 32 356580 356784 C 205 97.56 276 accept_chi 0 ALIGNMENT 36 YS2-13c21.q1k vc_5 273 238 1 36 C 36 100.00 276 reject_low 7 ALIGNMENT 0 YS2-13c21.q1k vc_1 236 62 2512 2511 C 175 0.00 276 reject_low 2 ALIGNMENT 0 YS2-13c21.q1k chr13 276 237 356581 356580 C 40 0.00 276 accept_chi 0 ALIGNMENT 0 YS2-13c21.p1k chr13 231 249 356784 356783 F 19 0.00 249 accept_chi 1 ALIGNMENT 0 YS2-13c21.q1k vc_7 62 238 13525 13524 F 177 0.00 276 reject_low 6 ALIGNMENT 0 YS2-13c21.q1k vc_5 237 62 37 36 C 176 0.00 276 reject_low 7 ALIGNMENT 0 YS2-13c21.q1k vc_4 62 236 5832 5831 F 175 0.00 276 reject_low 4 ALIGNMENT 0 YS2-13c21.q1k vc_5 237 62 5064 5063 C 176 0.00 276 reject_low 5 ALIGNMENT 40 YS2-13c21.q1k vc_4 237 276 5832 5871 F 40 100.00 276 reject_low 4 ALIGNMENT 38 YS2-13c21.q1k vc_7 239 276 13525 13562 F 38 100.00 276 reject_low 6 ALIGNMENT 40 YS2-13c21.q1k vc_3 276 237 2472 2511 C 40 100.00 276 reject_low 3 ALIGNMENT 139 YS2-13c21.p1k chr13 30 230 356582 356784 F 201 86.57 249 accept_chi 1 ALIGNMENT 0 YS2-13c21.q1k vc_3 236 62 2512 2511 C 175 0.00 276 reject_low 3 ALIGNMENT 40 YS2-13c21.q1k vc_1 276 237 2472 2511 C 40 100.00 276 reject_low 2 ALIGNMENT 0 YS2-13c22.q1k chr07 362 670 158963 158962 F 309 0.00 670 reject_low 21 ALIGNMENT 0 YS2-13c22.p1k chr02 285 791 464282 464281 F 507 0.00 1252 reject_low 22 ALIGNMENT 0 YS2-13c22.p1k vc_3 647 62 2106 2105 C 586 0.00 1252 reject_low 4 ALIGNMENT 0 YS2-13c22.q1k chr15 630 670 236533 236532 F 41 0.00 670 accept 0 ALIGNMENT 0 YS2-13c22.p1k chr15 173 62 236324 236323 C 112 0.00 1252 reject_low 24 ALIGNMENT 0 YS2-13c22.p1k vc_7 62 647 13562 13561 F 586 0.00 1252 reject_low 7 ALIGNMENT 267 YS2-13c22.p1k vc_2 1034 648 1737 2105 C 387 93.02 1252 reject_low 3 ALIGNMENT 49 YS2-13c22.p1k chr02 210 350 464094 464228 F 141 84.40 1252 reject_low 14 ALIGNMENT 0 YS2-13c22.p1k vc_1 647 62 2473 2472 C 586 0.00 1252 reject_low 16 ALIGNMENT 34 YS2-13c22.q1k chr15 309 419 236279 236389 F 111 81.98 670 reject_low 18 ALIGNMENT 267 YS2-13c22.p1k vc_7 648 1034 13562 13930 F 387 93.02 1252 reject_low 7 ALIGNMENT 64 YS2-13c22.q1k chr02 525 302 464066 464289 C 224 80.80 670 reject_low 13 ALIGNMENT 0 YS2-13c22.q1k chr16 670 419 462794 462793 C 252 0.00 670 reject_low 25 ALIGNMENT 547 YS2-13c22.p1k chr15 629 30 235928 236533 C 600 98.67 1252 reject_low 1 ALIGNMENT 0 YS2-13c22.p1k vc_3 647 62 2473 2472 C 586 0.00 1252 reject_low 17 ALIGNMENT 267 YS2-13c22.p1k vc_3 1034 648 1737 2105 C 387 93.02 1252 reject_low 4 ALIGNMENT 0 YS2-13c22.q1k chr16 381 62 462830 462829 C 320 0.00 670 reject_low 25 ALIGNMENT 0 YS2-13c22.p1k vc_5 647 62 5026 5025 C 586 0.00 1252 reject_low 5 ALIGNMENT 26 YS2-13c22.p1k vc_1 678 648 2441 2472 C 31 96.77 1252 reject_low 16 ALIGNMENT 258 YS2-13c22.p1k vc_4 648 1020 5871 6226 F 373 93.03 1252 reject_low 8 ALIGNMENT 22 YS2-13c22.p1k chr16 241 277 462793 462829 F 37 94.59 1252 reject_low 26 ALIGNMENT 267 YS2-13c22.p1k vc_7 648 1034 100 468 F 387 93.02 1252 reject_low 6 ALIGNMENT 0 YS2-13c22.p1k chr02 261 791 464228 464227 F 531 0.00 1252 reject_low 23 ALIGNMENT 0 YS2-13c22.q1k chr15 420 670 236389 236388 F 251 0.00 670 reject_low 18 ALIGNMENT 22 YS2-13c22.q1k chr16 418 382 462793 462829 C 37 94.59 670 reject_low 25 ALIGNMENT 0 YS2-13c22.p1k chr02 285 791 464222 464221 F 507 0.00 1252 reject_low 15 ALIGNMENT 0 YS2-13c22.q1k chr15 486 670 236323 236322 F 185 0.00 670 reject_low 20 ALIGNMENT 26 YS2-13c22.p1k vc_3 678 648 2441 2472 C 31 96.77 1252 reject_low 17 ALIGNMENT 34 YS2-13c22.p1k chr15 350 240 236279 236389 C 111 81.98 1252 accept 0 ALIGNMENT 0 YS2-13c22.p1k chr02 62 133 464069 464068 F 72 0.00 1252 reject_low 15 ALIGNMENT 31 YS2-13c22.p1k chr02 167 284 464164 464282 F 118 82.20 1252 reject_low 22 ALIGNMENT 0 YS2-13c22.q1k chr07 62 301 158934 158933 F 240 0.00 670 reject_low 19 ALIGNMENT 0 YS2-13c22.p1k chr16 62 240 462793 462792 F 179 0.00 1252 reject_low 26 ALIGNMENT 64 YS2-13c22.p1k chr02 134 357 464066 464289 F 224 80.80 1252 reject_low 11 ALIGNMENT 0 YS2-13c22.p1k chr15 791 630 235929 235928 C 162 0.00 1252 reject_low 1 ALIGNMENT 0 YS2-13c22.q1k chr15 62 308 236279 236278 F 247 0.00 670 reject_low 18 ALIGNMENT 0 YS2-13c22.q1k vc_7 62 632 13525 13524 F 571 0.00 670 reject_low 12 ALIGNMENT 0 YS2-13c22.p1k vc_1 791 679 2442 2441 C 113 0.00 1252 reject_low 16 ALIGNMENT 0 YS2-13c22.p1k chr02 62 133 464066 464065 F 72 0.00 1252 reject_low 11 ALIGNMENT 31 YS2-13c22.q1k chr07 302 359 158934 158991 F 58 86.21 670 reject_low 19 ALIGNMENT 41 YS2-13c22.q1k vc_1 670 630 2472 2512 C 41 100.00 670 reject_low 9 ALIGNMENT 0 YS2-13c22.p1k vc_7 62 647 100 99 F 586 0.00 1252 reject_low 6 ALIGNMENT 0 YS2-13c22.q1k chr15 62 374 236219 236218 F 313 0.00 670 reject_low 20 ALIGNMENT 267 YS2-13c22.p1k vc_1 1034 648 1737 2105 C 387 93.02 1252 reject_low 2 ALIGNMENT 38 YS2-13c22.q1k vc_7 633 670 13525 13562 F 38 100.00 670 reject_low 12 ALIGNMENT 0 YS2-13c22.p1k chr16 278 791 462829 462828 F 514 0.00 1252 reject_low 26 ALIGNMENT 40 YS2-13c22.p1k chr02 134 284 464069 464222 F 151 82.12 1252 reject_low 15 ALIGNMENT 0 YS2-13c22.p1k chr15 791 285 236220 236219 C 507 0.00 1252 reject_low 24 ALIGNMENT 0 YS2-13c22.p1k vc_3 791 679 2442 2441 C 113 0.00 1252 reject_low 17 ALIGNMENT 0 YS2-13c22.q1k chr02 301 62 464290 464289 C 240 0.00 670 reject_low 13 ALIGNMENT 0 YS2-13c22.q1k vc_1 629 62 2513 2512 C 568 0.00 670 reject_low 9 ALIGNMENT 31 YS2-13c22.q1k chr02 492 375 464164 464282 C 118 82.20 670 reject_low 11,14,15 ALIGNMENT 0 YS2-13c22.q1k chr02 670 526 464067 464066 C 145 0.00 670 reject_low 13 ALIGNMENT 0 YS2-13c22.p1k vc_2 647 62 2106 2105 C 586 0.00 1252 reject_low 3 ALIGNMENT 542 YS2-13c22.q1k chr15 31 629 235928 236533 F 599 98.50 670 accept 0 ALIGNMENT 267 YS2-13c22.p1k vc_5 1034 648 4657 5025 C 387 93.02 1252 reject_low 5 ALIGNMENT 26 YS2-13c22.q1k chr15 375 485 236219 236323 F 111 82.88 670 reject_low 20 ALIGNMENT 0 YS2-13c22.q1k chr07 360 670 158991 158990 F 311 0.00 670 reject_low 19 ALIGNMENT 27 YS2-13c22.q1k chr07 302 361 158904 158963 F 60 83.33 670 reject_low 21 ALIGNMENT 41 YS2-13c22.q1k vc_4 630 670 5831 5871 F 41 100.00 670 reject_low 10 ALIGNMENT 0 YS2-13c22.p1k chr02 351 791 464228 464227 F 441 0.00 1252 reject_low 14 ALIGNMENT 0 YS2-13c22.p1k chr02 358 791 464289 464288 F 434 0.00 1252 reject_low 11 ALIGNMENT 0 YS2-13c22.q1k chr07 62 301 158904 158903 F 240 0.00 670 reject_low 21 ALIGNMENT 0 YS2-13c22.p1k chr02 62 166 464164 464163 F 105 0.00 1252 reject_low 22 ALIGNMENT 0 YS2-13c22.q1k chr02 670 493 464165 464164 C 178 0.00 670 reject_low 11,14,15 ALIGNMENT 0 YS2-13c22.p1k chr02 62 209 464094 464093 F 148 0.00 1252 reject_low 14 ALIGNMENT 0 YS2-13c22.q1k chr02 374 62 464283 464282 C 313 0.00 670 reject_low 11,14,15 ALIGNMENT 0 YS2-13c22.p1k chr02 62 166 464134 464133 F 105 0.00 1252 reject_low 23 ALIGNMENT 0 YS2-13c22.p1k vc_4 62 647 5871 5870 F 586 0.00 1252 reject_low 8 ALIGNMENT 0 YS2-13c22.p1k chr15 791 351 236280 236279 C 441 0.00 1252 accept 0 ALIGNMENT 26 YS2-13c22.p1k chr15 284 174 236219 236323 C 111 82.88 1252 reject_low 24 ALIGNMENT 30 YS2-13c22.p1k chr02 167 260 464134 464228 F 94 84.04 1252 reject_low 23 ALIGNMENT 0 YS2-13c22.p1k vc_1 647 62 2106 2105 C 586 0.00 1252 reject_low 2 ALIGNMENT 0 YS2-13c22.p1k chr15 239 62 236390 236389 C 178 0.00 1252 accept 0 ALIGNMENT 0 YS2-13c22.q1k vc_4 62 629 5831 5830 F 568 0.00 670 reject_low 10 ALIGNMENT 890 YS2-13c23.q1k chr05 1179 30 195342 196471 C 1150 93.83 1301 accept 0 ALIGNMENT 487 YS2-13c24.q1k chr05 739 36 195773 196468 C 704 90.62 1448 accept 0 ALIGNMENT 645 YS2-13c24.p1k chr05 176 896 191877 192595 F 721 96.95 1426 accept 0 ALIGNMENT 38 YS2-13d01.q1k vc_7 291 328 13525 13562 F 38 100.00 328 reject_low 7 ALIGNMENT 36 YS2-13d01.q1k vc_5 325 290 1 36 C 36 100.00 328 reject_low 8 ALIGNMENT 0 YS2-13d01.q1k vc_2 287 62 2146 2145 C 226 0.00 328 reject_low 3 ALIGNMENT 41 YS2-13d01.q1k vc_4 288 328 5831 5871 F 41 100.00 328 reject_low 5 ALIGNMENT 39 YS2-13d01.q1k vc_5 328 290 5025 5063 C 39 100.00 328 reject_low 6 ALIGNMENT 0 YS2-13d01.q1k vc_5 289 62 5064 5063 C 228 0.00 328 reject_low 6 ALIGNMENT 0 YS2-13d01.q1k vc_4 62 287 5831 5830 F 226 0.00 328 reject_low 5 ALIGNMENT 235 YS2-13d01.p1k chr09 32 280 135241 135489 F 249 98.80 298 accept_chi 1 ALIGNMENT 242 YS2-13d01.q1k chr09 287 32 135234 135489 C 256 98.83 328 accept_chi 0 ALIGNMENT 41 YS2-13d01.q1k vc_3 328 288 2472 2512 C 41 100.00 328 reject_low 4 ALIGNMENT 0 YS2-13d01.q1k vc_5 289 62 37 36 C 228 0.00 328 reject_low 8 ALIGNMENT 0 YS2-13d01.q1k vc_1 287 62 2513 2512 C 226 0.00 328 reject_low 2 ALIGNMENT 0 YS2-13d01.p1k chr09 281 298 135489 135488 F 18 0.00 298 accept_chi 1 ALIGNMENT 0 YS2-13d01.q1k chr09 328 288 135235 135234 C 41 0.00 328 accept_chi 0 ALIGNMENT 0 YS2-13d01.q1k vc_3 287 62 2513 2512 C 226 0.00 328 reject_low 4 ALIGNMENT 41 YS2-13d01.q1k vc_1 328 288 2472 2512 C 41 100.00 328 reject_low 2 ALIGNMENT 0 YS2-13d01.q1k vc_7 62 290 13525 13524 F 229 0.00 328 reject_low 7 ALIGNMENT 41 YS2-13d01.q1k vc_2 328 288 2105 2145 C 41 100.00 328 reject_low 3 ALIGNMENT 22 YS2-13d02.p1k chr08 895 938 288679 288722 F 44 86.36 1211 reject_low 2 ALIGNMENT 75 YS2-13d02.p1k chr09 806 193 19713 20328 C 614 72.15 1211 reject_low 8 ALIGNMENT 0 YS2-13d02.p1k chr10 108 62 27801 27800 C 47 0.00 1211 reject_low 7 ALIGNMENT 0 YS2-13d02.p1k chr10 871 843 27065 27064 C 29 0.00 1211 reject_low 7 ALIGNMENT 0 YS2-13d02.p1k chr04 62 201 1163847 1163846 F 140 0.00 1211 reject_low 3 ALIGNMENT 995 YS2-13d02.p1k chr04 33 1169 1160328 1161475 F 1137 96.75 1211 accept 0 ALIGNMENT 0 YS2-13d02.p1k chr08 62 199 291812 291811 F 138 0.00 1211 reject_low 4 ALIGNMENT 0 YS2-13d02.q1k chr08 868 269 290917 290916 C 600 0.00 1372 reject_low 2 ALIGNMENT 0 YS2-13d02.q1k chr04 868 272 1159598 1159597 C 597 0.00 1372 reject_low 1 ALIGNMENT 117 YS2-13d02.q1k chr04 271 38 1154205 1154438 C 234 83.76 1372 reject_low 5 ALIGNMENT 0 YS2-13d02.p1k chr08 795 871 292406 292405 F 77 0.00 1211 reject_low 4 ALIGNMENT 114 YS2-13d02.q1k chr04 271 38 1159597 1159830 C 234 83.33 1372 reject_low 1 ALIGNMENT 0 YS2-13d02.p1k chr13 236 62 288831 288830 C 175 0.00 1211 reject_low 6 ALIGNMENT 438 YS2-13d02.p1k chr04 202 837 1163847 1164482 F 636 90.88 1211 reject_low 3 ALIGNMENT 994 YS2-13d02.q1k chr04 1126 38 1162080 1163179 C 1089 98.07 1372 accept 0 ALIGNMENT 0 YS2-13d02.p1k chr09 192 62 20329 20328 C 131 0.00 1211 reject_low 8 ALIGNMENT 155 YS2-13d02.p1k chr13 806 237 288261 288830 C 570 77.19 1211 reject_low 6 ALIGNMENT 0 YS2-13d02.q1k chr04 868 272 1154206 1154205 C 597 0.00 1372 reject_low 5 ALIGNMENT 130 YS2-13d02.p1k chr10 842 109 27064 27800 C 734 74.52 1211 reject_low 7 ALIGNMENT 0 YS2-13d02.p1k chr04 838 871 1164482 1164481 F 34 0.00 1211 reject_low 3 ALIGNMENT 265 YS2-13d02.p1k chr08 200 794 291812 292406 F 595 82.69 1211 reject_low 4 ALIGNMENT 117 YS2-13d02.q1k chr08 268 38 290916 291146 C 231 83.98 1372 reject_low 2 ALIGNMENT 0 YS2-13d02.p1k chr08 862 894 288642 288678 F 33 0.00 1211 reject_low 2 ALIGNMENT 422 YS2-13d02.p1k chr08 70 861 287850 288641 F 792 85.48 1211 reject_low 2 ALIGNMENT 961 YS2-13d02.p1k chr04 33 1079 1154936 1155986 F 1047 98.09 1211 reject_low 1 ALIGNMENT 0 YS2-13d02.p1k chr13 871 807 288262 288261 C 65 0.00 1211 reject_low 6 ALIGNMENT 0 YS2-13d02.p1k chr09 871 807 19714 19713 C 65 0.00 1211 reject_low 8 ALIGNMENT 0 YS2-13d03.q1k vc_4 62 262 5832 5831 F 201 0.00 302 reject_low 4 ALIGNMENT 209 YS2-13d03.p1k chr04 259 38 720174 720395 C 222 99.55 277 accept_chi 1 ALIGNMENT 36 YS2-13d03.q1k vc_5 299 264 1 36 C 36 100.00 302 reject_low 7 ALIGNMENT 39 YS2-13d03.q1k vc_5 302 264 5025 5063 C 39 100.00 302 reject_low 5 ALIGNMENT 0 YS2-13d03.q1k vc_1 262 62 2512 2511 C 201 0.00 302 reject_low 2 ALIGNMENT 40 YS2-13d03.q1k vc_4 263 302 5832 5871 F 40 100.00 302 reject_low 4 ALIGNMENT 0 YS2-13d03.q1k vc_7 62 264 13525 13524 F 203 0.00 302 reject_low 6 ALIGNMENT 0 YS2-13d03.p1k chr04 277 260 720175 720174 C 18 0.00 277 accept_chi 1 ALIGNMENT 38 YS2-13d03.q1k vc_7 265 302 13525 13562 F 38 100.00 302 reject_low 6 ALIGNMENT 0 YS2-13d03.q1k vc_5 263 62 5064 5063 C 202 0.00 302 reject_low 5 ALIGNMENT 0 YS2-13d03.q1k chr04 263 302 720401 720400 F 40 0.00 302 accept_chi 0 ALIGNMENT 40 YS2-13d03.q1k vc_1 302 263 2472 2511 C 40 100.00 302 reject_low 2 ALIGNMENT 210 YS2-13d03.q1k chr04 36 262 720174 720401 F 227 99.12 302 accept_chi 0 ALIGNMENT 0 YS2-13d03.q1k vc_5 263 62 37 36 C 202 0.00 302 reject_low 7 ALIGNMENT 40 YS2-13d03.q1k vc_3 302 263 2472 2511 C 40 100.00 302 reject_low 3 ALIGNMENT 0 YS2-13d03.q1k vc_3 262 62 2512 2511 C 201 0.00 302 reject_low 3 ALIGNMENT 0 YS2-13d04.q1k vc_3 523 297 2512 2511 C 227 0.00 1416 reject_low 17 ALIGNMENT 0 YS2-13d04.q1k vc_2 297 562 2164 2163 F 266 0.00 1416 reject_low 11 ALIGNMENT 148 YS2-13d04.q1k chrm 32 523 45744 46207 F 492 84.96 1416 reject_low 6 ALIGNMENT 259 YS2-13d04.p1k vc_4 541 893 5875 6226 F 353 91.78 1243 reject_low 8 ALIGNMENT 381 YS2-13d04.q1k vc_5 563 1222 2398 3057 F 660 86.97 1416 reject_vc 0 ALIGNMENT 302 YS2-13d04.p1k vc_7 541 1071 104 627 F 531 87.19 1243 reject_low 1 ALIGNMENT 168 YS2-13d04.q1k vc_7 1019 774 4927 5172 C 246 89.43 1416|0,1 reject_low 20 ALIGNMENT 0 YS2-13d04.q1k vc_4 725 958 288 1547 F 234 0.00 1416 reject_low 21 ALIGNMENT 36 YS2-13d04.q1k vc_5 563 525 5025 5063 C 39 97.44 1416 reject_low 18 ALIGNMENT 37 YS2-13d04.q1k vc_4 524 563 5832 5871 F 40 97.50 1416 reject_low 14 ALIGNMENT 0 YS2-13d04.q1k vc_4 958 652 113 1445 C 307 0.00 1416 reject_low 22 ALIGNMENT 0 YS2-13d04.q1k vc_2 523 297 2145 2144 C 227 0.00 1416 reject_low 16 ALIGNMENT 23 YS2-13d04.q1k vc_7 1094 1041 4635 4686 C 54 83.33 1416 reject_low 20 ALIGNMENT 37 YS2-13d04.q1k vc_3 563 524 2472 2511 C 40 97.50 1416 reject_low 17 ALIGNMENT 0 YS2-13d04.q1k vc_7 722 297 6412 6411 C 426 0.00 1416 reject_low 20 ALIGNMENT 0 YS2-13d04.q1k vc_4 562 297 1535 1534 C 266 0.00 1416 reject_low 22 ALIGNMENT 0 YS2-13d04.q1k vc_4 562 297 5813 5812 C 266 0.00 1416 reject_low 9 ALIGNMENT 302 YS2-13d04.p1k vc_5 1071 541 4498 5021 C 531 87.19 1243 reject_vc 0 ALIGNMENT 0 YS2-13d04.q1k vc_7 1040 1020 4687 4926 C 21 0.00 1416 reject_low 20 ALIGNMENT 0 YS2-13d04.q1k vc_4 958 297 6340 6339 C 662 0.00 1416 reject_low 8 ALIGNMENT 78 YS2-13d04.q1k vc_4 651 563 1446 1534 C 89 96.63 1416 reject_low 22 ALIGNMENT 362 YS2-13d04.q1k vc_3 563 1019 2531 2986 F 457 93.44 1416 reject_low 12 ALIGNMENT 0 YS2-13d04.q1k vc_3 297 562 2531 2530 F 266 0.00 1416 reject_low 12 ALIGNMENT 31 YS2-13d04.q1k vc_4 1019 959 52 112 C 61 85.25 1416 reject_low 22 ALIGNMENT 0 YS2-13d04.q1k vc_4 564 563 5872 6353 F 0 0.00 1416 reject_low 14 ALIGNMENT 37 YS2-13d04.q1k vc_2 563 524 2105 2144 C 40 97.50 1416 reject_low 16 ALIGNMENT 362 YS2-13d04.q1k vc_2 563 1019 2164 2619 F 457 93.44 1416 reject_low 11 ALIGNMENT 147 YS2-13d04.q1k vc_4 563 724 6353 6514 F 162 97.53 1416|1,0 reject_low 14 ALIGNMENT 0 YS2-13d04.q1k vc_5 524 297 37 36 C 228 0.00 1416 reject_low 19 ALIGNMENT 27 YS2-13d04.q1k vc_4 1041 1222 1889 2073 F 182 74.18 1416 reject_low 21 ALIGNMENT 0 YS2-13d04.q1k vc_4 1020 1040 1609 1888 F 21 0.00 1416 reject_low 21 ALIGNMENT 302 YS2-13d04.p1k vc_2 1071 541 1578 2101 C 531 87.19 1243 reject_low 3 ALIGNMENT 0 YS2-13d04.q1k vc_1 523 297 2512 2511 C 227 0.00 1416 reject_low 15 ALIGNMENT 130 YS2-13d04.p1k vc_6 766 987 3585 3805 F 222 87.39 1243 reject_low 13 ALIGNMENT 0 YS2-13d04.q1k vc_7 774 775 5172 6360 C 0 0.00 1416 reject_low 20 ALIGNMENT 31 YS2-13d04.q1k vc_4 1019 959 6279 6339 C 61 85.25 1416 reject_low 8 ALIGNMENT 0 YS2-13d04.q1k vc_5 297 562 2398 2397 F 266 0.00 1416 reject_vc 0 ALIGNMENT 0 YS2-13d04.q1k vc_1 297 562 2531 2530 F 266 0.00 1416 reject_low 10 ALIGNMENT 33 YS2-13d04.q1k vc_5 560 525 1 36 C 36 97.22 1416 reject_low 19 ALIGNMENT 0 YS2-13d04.q1k vc_5 524 297 5064 5063 C 228 0.00 1416 reject_low 18 ALIGNMENT 31 YS2-13d04.q1k vc_4 959 1019 1548 1608 F 61 85.25 1416 reject_low 21 ALIGNMENT 302 YS2-13d04.p1k vc_1 1071 541 1578 2101 C 531 87.19 1243 reject_low 2 ALIGNMENT 370 YS2-13d04.q1k vc_4 1094 563 5284 5812 C 532 90.60 1416 reject_low 9 ALIGNMENT 120 YS2-13d04.p1k chrm 519 31 45741 46205 C 489 80.98 1243 reject_low 7 ALIGNMENT 147 YS2-13d04.q1k vc_4 563 724 126 287 F 162 97.53 1416 reject_low 21 ALIGNMENT 302 YS2-13d04.p1k vc_3 1071 541 1578 2101 C 531 87.19 1243 reject_low 4 ALIGNMENT 47 YS2-13d04.q1k vc_7 775 723 6360 6411 C 53 98.11 1416|1,0 reject_low 20 ALIGNMENT 0 YS2-13d04.q1k vc_4 297 523 5832 5831 F 227 0.00 1416 reject_low 14 ALIGNMENT 37 YS2-13d04.q1k vc_1 563 524 2472 2511 C 40 97.50 1416 reject_low 15 ALIGNMENT 0 YS2-13d04.q1k vc_4 297 562 126 125 F 266 0.00 1416 reject_low 21 ALIGNMENT 362 YS2-13d04.q1k vc_1 563 1019 2531 2986 F 457 93.44 1416 reject_low 10 ALIGNMENT 377 YS2-13d04.q1k vc_7 1094 563 2201 2727 C 532 90.98 1416 reject_low 1 ALIGNMENT 302 YS2-13d04.p1k vc_7 541 1071 13566 14089 F 531 87.19 1243 reject_low 5 ALIGNMENT 0 YS2-13d04.q1k vc_7 562 297 2728 2727 C 266 0.00 1416 reject_low 1 ALIGNMENT 1040 YS2-13d05.p1k chr13 1213 31 446052 447244 C 1183 96.79 1227 accept 0 ALIGNMENT 991 YS2-13d05.q1k chr13 39 1137 444405 445511 F 1099 97.63 1400 accept 0 ALIGNMENT 0 YS2-13d06.q1k chr08 509 465 56428 56419 C 45 0.00 608 reject_bad_break 0 ALIGNMENT 50 YS2-13d06.q1k chr08 567 510 56370 56427 C 58 98.28 608 reject_bad_break 0 ALIGNMENT 404 YS2-13d06.p1k chr08 131 553 56420 56842 F 423 99.29 571 reject_bad_break 1 ALIGNMENT 41 YS2-13d06.q1k vc_4 568 608 5831 5871 F 41 100.00 608 reject_low 4 ALIGNMENT 0 YS2-13d06.q1k vc_5 569 62 37 36 C 508 0.00 608 reject_low 7 ALIGNMENT 0 YS2-13d06.q1k chr08 608 568 56371 56370 C 41 0.00 608 reject_bad_break 0 ALIGNMENT 0 YS2-13d06.q1k vc_7 62 570 13525 13524 F 509 0.00 608 reject_low 6 ALIGNMENT 0 YS2-13d06.p1k chr08 86 130 56428 56419 F 45 0.00 571 reject_bad_break 1 ALIGNMENT 36 YS2-13d06.q1k vc_5 605 570 1 36 C 36 100.00 608 reject_low 7 ALIGNMENT 41 YS2-13d06.q1k vc_3 608 568 2472 2512 C 41 100.00 608 reject_low 3 ALIGNMENT 44 YS2-13d06.p1k chr08 28 85 56370 56427 F 58 94.83 571 reject_bad_break 1 ALIGNMENT 41 YS2-13d06.q1k vc_1 608 568 2472 2512 C 41 100.00 608 reject_low 2 ALIGNMENT 0 YS2-13d06.q1k vc_5 569 62 5064 5063 C 508 0.00 608 reject_low 5 ALIGNMENT 0 YS2-13d06.q1k vc_4 62 567 5831 5830 F 506 0.00 608 reject_low 4 ALIGNMENT 0 YS2-13d06.q1k vc_3 567 62 2513 2512 C 506 0.00 608 reject_low 3 ALIGNMENT 0 YS2-13d06.q1k vc_1 567 62 2513 2512 C 506 0.00 608 reject_low 2 ALIGNMENT 400 YS2-13d06.q1k chr08 464 41 56420 56842 C 424 99.06 608 reject_bad_break 0 ALIGNMENT 0 YS2-13d06.p1k chr08 554 571 56842 56841 F 18 0.00 571 reject_bad_break 1 ALIGNMENT 39 YS2-13d06.q1k vc_5 608 570 5025 5063 C 39 100.00 608 reject_low 5 ALIGNMENT 38 YS2-13d06.q1k vc_7 571 608 13525 13562 F 38 100.00 608 reject_low 6 ALIGNMENT 39 YS2-13d07.q1k vc_5 214 176 5025 5063 C 39 100.00 214 reject_low 5 ALIGNMENT 0 YS2-13d07.q1k vc_3 172 62 2514 2513 C 111 0.00 214 reject_low 3 ALIGNMENT 36 YS2-13d07.q1k vc_5 211 176 1 36 C 36 100.00 214 reject_low 7 ALIGNMENT 38 YS2-13d07.q1k vc_7 177 214 13525 13562 F 38 100.00 214 reject_low 6 ALIGNMENT 0 YS2-13d07.q1k vc_5 175 62 5064 5063 C 114 0.00 214 reject_low 5 ALIGNMENT 122 YS2-13d07.q1k chr08 37 173 132793 132929 F 137 97.81 214 accept 0 ALIGNMENT 0 YS2-13d07.q1k vc_4 62 172 5830 5829 F 111 0.00 214 reject_low 4 ALIGNMENT 0 YS2-13d07.q1k vc_1 172 62 2514 2513 C 111 0.00 214 reject_low 1 ALIGNMENT 0 YS2-13d07.q1k chr08 174 214 132929 132928 F 41 0.00 214 accept 0 ALIGNMENT 42 YS2-13d07.q1k vc_2 214 173 2105 2146 C 42 100.00 214 reject_low 2 ALIGNMENT 42 YS2-13d07.q1k vc_4 173 214 5830 5871 F 42 100.00 214 reject_low 4 ALIGNMENT 42 YS2-13d07.q1k vc_3 214 173 2472 2513 C 42 100.00 214 reject_low 3 ALIGNMENT 0 YS2-13d07.q1k vc_7 62 176 13525 13524 F 115 0.00 214 reject_low 6 ALIGNMENT 0 YS2-13d07.q1k vc_5 175 62 37 36 C 114 0.00 214 reject_low 7 ALIGNMENT 0 YS2-13d07.q1k vc_2 172 62 2147 2146 C 111 0.00 214 reject_low 2 ALIGNMENT 42 YS2-13d07.q1k vc_1 214 173 2472 2513 C 42 100.00 214 reject_low 1 ALIGNMENT 1015 YS2-13d08.q1k chr15 25 1142 315693 316821 F 1118 97.50 1364 accept 0 ALIGNMENT 1020 YS2-13d08.p1k chr15 1223 26 318916 320121 C 1198 96.49 1225 accept 0 ALIGNMENT 1043 YS2-13d09.p1k chr03 1229 36 121061 122260 C 1194 96.48 1266 accept 0 ALIGNMENT 0 YS2-13d09.p1k chr14 153 62 630824 630823 C 92 0.00 1266 reject_low 1 ALIGNMENT 988 YS2-13d09.q1k chr03 38 1213 115902 117095 F 1176 96.34 1415 accept 0 ALIGNMENT 210 YS2-13d09.p1k chr14 1026 154 629948 630823 C 873 75.60 1266 reject_low 1 ALIGNMENT 1010 YS2-13d10.p1k chr07 32 1261 149699 150935 F 1230 95.12 1267 accept 0 ALIGNMENT 998 YS2-13d10.q1k chr07 1212 30 150366 151557 C 1183 96.11 1425 accept 0 ALIGNMENT 1028 YS2-13d11.p1k chr14 30 1199 701220 702398 F 1170 96.32 1199 accept 0 ALIGNMENT 962 YS2-13d11.q1k chr14 1182 32 705050 706213 C 1151 95.74 1379 accept 0 ALIGNMENT 1007 YS2-13d12.q1k chr11 1198 35 340676 341854 C 1164 96.13 1376 accept 0 ALIGNMENT 29 YS2-13d12.p1k chr04 392 335 654336 654393 C 58 89.66 1151 reject_low 1 ALIGNMENT 0 YS2-13d12.p1k chr16 62 350 185371 185370 F 289 0.00 1151 reject_low 3 ALIGNMENT 22 YS2-13d12.p1k chr16 351 419 185371 185439 F 69 88.41 1151 reject_low 3 ALIGNMENT 857 YS2-13d12.p1k chr11 31 1059 336788 337823 F 1029 96.21 1151 accept 0 ALIGNMENT 0 YS2-13d12.p1k chr16 420 840 185439 185438 F 421 0.00 1151 reject_low 3 ALIGNMENT 0 YS2-13d12.p1k chr13 62 353 588600 588599 F 292 0.00 1151 reject_low 2 ALIGNMENT 0 YS2-13d12.p1k chr13 443 840 588688 588687 F 398 0.00 1151 reject_low 2 ALIGNMENT 20 YS2-13d12.p1k chr13 354 442 588600 588688 F 89 85.39 1151 reject_low 2 ALIGNMENT 0 YS2-13d12.p1k chr04 840 393 654337 654336 C 448 0.00 1151 reject_low 1 ALIGNMENT 0 YS2-13d12.p1k chr04 334 62 654394 654393 C 273 0.00 1151 reject_low 1 ALIGNMENT 968 YS2-13d13.p1k chr02 34 1189 618734 619906 F 1156 95.76 1218 accept 0 ALIGNMENT 926 YS2-13d13.q1k chr02 1102 40 623206 624284 C 1063 96.33 1361 accept 0 ALIGNMENT 921 YS2-13d14.q1k chr15 31 1041 275409 276429 F 1011 97.63 1340 accept 0 ALIGNMENT 1038 YS2-13d14.p1k chr15 1247 33 279843 281061 C 1215 95.80 1254 accept 0 ALIGNMENT 0 YS2-13d16.q1k chr01 114 62 229331 229330 C 53 0.00 1378 reject_low 1 ALIGNMENT 654 YS2-13d16.q1k chr01 1129 115 228306 229330 C 1015 88.97 1378 reject_low 1 ALIGNMENT 978 YS2-13d16.q1k chr12 1163 39 1003085 1004224 C 1125 96.80 1378 accept 0 ALIGNMENT 0 YS2-13d16.q1k chr08 139 62 555966 555965 C 78 0.00 1378 reject_low 2 ALIGNMENT 0 YS2-13d16.q1k chr13 62 149 162206 162205 F 88 0.00 1378 reject_low 3 ALIGNMENT 587 YS2-13d16.q1k chr13 150 1054 162206 163110 F 905 88.73 1378 reject_low 3 ALIGNMENT 641 YS2-13d16.q1k chr08 1129 140 554969 555965 C 990 88.99 1378 reject_low 2 ALIGNMENT 992 YS2-13d16.p1k chr12 30 1235 999662 1000885 F 1206 95.02 1246 accept 0 ALIGNMENT 915 YS2-13d17.q1k chr12 1144 44 59136 60249 C 1101 95.19 1370 accept 0 ALIGNMENT 1049 YS2-13d17.p1k chr12 31 1235 55627 56832 F 1205 96.68 1237 accept 0 ALIGNMENT 39 YS2-13d18.q1k vc_5 480 442 5025 5063 C 39 100.00 480 reject_low 5 ALIGNMENT 0 YS2-13d18.q1k vc_1 440 62 2512 2511 C 379 0.00 480 reject_low 2 ALIGNMENT 0 YS2-13d18.q1k vc_3 440 62 2512 2511 C 379 0.00 480 reject_low 3 ALIGNMENT 398 YS2-13d18.q1k chr01 27 440 90897 91311 F 414 99.76 480 accept_chi 1 ALIGNMENT 38 YS2-13d18.q1k vc_7 443 480 13525 13562 F 38 100.00 480 reject_low 6 ALIGNMENT 0 YS2-13d18.q1k vc_4 62 440 5832 5831 F 379 0.00 480 reject_low 4 ALIGNMENT 40 YS2-13d18.q1k vc_3 480 441 2472 2511 C 40 100.00 480 reject_low 3 ALIGNMENT 0 YS2-13d18.q1k vc_5 441 62 5064 5063 C 380 0.00 480 reject_low 5 ALIGNMENT 0 YS2-13d18.q1k vc_7 62 442 13525 13524 F 381 0.00 480 reject_low 6 ALIGNMENT 0 YS2-13d18.q1k chr01 441 480 91311 91310 F 40 0.00 480 accept_chi 1 ALIGNMENT 403 YS2-13d18.p1k chr01 443 29 90897 91311 C 415 100.00 461 accept_chi 0 ALIGNMENT 40 YS2-13d18.q1k vc_4 441 480 5832 5871 F 40 100.00 480 reject_low 4 ALIGNMENT 36 YS2-13d18.q1k vc_5 477 442 1 36 C 36 100.00 480 reject_low 7 ALIGNMENT 0 YS2-13d18.p1k chr01 461 444 90898 90897 C 18 0.00 461 accept_chi 0 ALIGNMENT 40 YS2-13d18.q1k vc_1 480 441 2472 2511 C 40 100.00 480 reject_low 2 ALIGNMENT 0 YS2-13d18.q1k vc_5 441 62 37 36 C 380 0.00 480 reject_low 7 ALIGNMENT 40 YS2-13d19.q1k vc_1 360 321 2472 2511 C 40 100.00 360 reject_vc 0 ALIGNMENT 0 YS2-13d19.q1k vc_7 62 322 13525 13524 F 261 0.00 360 reject_vc 4 ALIGNMENT 36 YS2-13d19.q1k vc_5 357 322 1 36 C 36 100.00 360 reject_vc 5 ALIGNMENT 40 YS2-13d19.q1k vc_3 360 321 2472 2511 C 40 100.00 360 reject_vc 1 ALIGNMENT 0 YS2-13d19.q1k vc_4 62 320 5832 5831 F 259 0.00 360 reject_vc 2 ALIGNMENT 0 YS2-13d19.q1k vc_3 320 62 2512 2511 C 259 0.00 360 reject_vc 1 ALIGNMENT 0 YS2-13d19.q1k vc_5 321 62 37 36 C 260 0.00 360 reject_vc 5 ALIGNMENT 0 YS2-13d19.q1k vc_5 321 62 5064 5063 C 260 0.00 360 reject_vc 3 ALIGNMENT 40 YS2-13d19.q1k vc_4 321 360 5832 5871 F 40 100.00 360 reject_vc 2 ALIGNMENT 39 YS2-13d19.q1k vc_5 360 322 5025 5063 C 39 100.00 360 reject_vc 3 ALIGNMENT 0 YS2-13d19.q1k vc_1 320 62 2512 2511 C 259 0.00 360 reject_vc 0 ALIGNMENT 38 YS2-13d19.q1k vc_7 323 360 13525 13562 F 38 100.00 360 reject_vc 4 ALIGNMENT 974 YS2-13d20.q1k chr05 28 1145 392973 394103 F 1118 96.87 1365 accept 0 ALIGNMENT 1027 YS2-13d20.p1k chr05 1221 29 397541 398727 C 1193 96.65 1234 accept 0 ALIGNMENT 690 YS2-13d23.p1k chr12 854 28 421440 422259 C 827 96.74 1277 accept 0 ALIGNMENT 997 YS2-13d23.q1k chr12 29 1109 417660 418756 F 1081 98.24 1283 accept 0 ALIGNMENT 857 YS2-13d24.q1k chr08 1065 38 116751 117782 C 1028 96.01 1332 accept 0 ALIGNMENT 739 YS2-13d24.p1k chr08 27 934 112656 113547 F 908 96.37 1270 accept 0 ALIGNMENT 1026 YS2-13e01.q1k chr02 29 1272 676704 677956 F 1244 95.10 1336 accept 0 ALIGNMENT 925 YS2-13e01.p1k chr02 1187 66 680863 681982 C 1122 95.99 1187 accept 0 ALIGNMENT 970 YS2-13e02.q1k chr04 46 1126 312519 313615 F 1081 97.50 1369 accept 0 ALIGNMENT 882 YS2-13e02.p1k chr04 1024 32 316308 317315 C 993 96.98 1196 accept 0 ALIGNMENT 981 YS2-13e03.p1k chr07 1116 31 4187 5270 C 1086 97.61 1173 ambiguous_tel 0 ALIGNMENT 968 YS2-13e03.q1k chr07 28 1104 4190 5271 F 1077 97.03 1330 ambiguous_tel 1 ALIGNMENT 29 YS2-13e03.q1k vc_7 1185 1149 2689 2726 C 37 91.89 1330 reject_low 4 ALIGNMENT 0 YS2-13e03.q1k vc_1 92 1148 2532 2531 F 1057 0.00 1330 reject_low 2 ALIGNMENT 29 YS2-13e03.q1k vc_1 1149 1185 2532 2569 F 37 91.89 1330 reject_low 2 ALIGNMENT 29 YS2-13e03.q1k vc_5 1149 1185 2399 2436 F 37 91.89 1330 reject_low 3 ALIGNMENT 0 YS2-13e03.q1k vc_7 1148 92 2727 2726 C 1057 0.00 1330 reject_low 4 ALIGNMENT 0 YS2-13e03.q1k vc_5 92 1148 2399 2398 F 1057 0.00 1330 reject_low 3 ALIGNMENT 931 YS2-13e04.p1k chr14 1150 30 50553 51694 C 1121 95.27 1207 accept 0 ALIGNMENT 942 YS2-13e04.q1k chr14 30 1162 46128 47288 F 1133 95.59 1373 accept 0 ALIGNMENT 0 YS2-13e05.q1k vc_3 878 100 2514 2513 C 779 0.00 1365 reject_low 19 ALIGNMENT 0 YS2-13e05.q1k vc_2 100 919 2164 2163 F 820 0.00 1365 reject_low 10 ALIGNMENT 36 YS2-13e05.q1k vc_5 917 882 1 36 C 36 100.00 1365 reject_low 23 ALIGNMENT 0 YS2-13e05.p1k vc_2 920 77 2106 2105 C 844 0.00 1225 reject_low 5 ALIGNMENT 166 YS2-13e05.p1k vc_5 1225 921 4720 5025 C 305 85.57 1225 reject_low 2 ALIGNMENT 0 YS2-13e05.q1k vc_4 921 920 5872 6353 F 0 0.00 1365 reject_low 14 ALIGNMENT 0 YS2-13e05.q1k vc_2 878 100 2147 2146 C 779 0.00 1365 reject_low 18 ALIGNMENT 0 YS2-13e05.q1k vc_5 100 919 2398 2397 F 820 0.00 1365 reject_low 2 ALIGNMENT 0 YS2-13e05.q1k vc_1 878 100 2514 2513 C 779 0.00 1365 reject_low 17 ALIGNMENT 159 YS2-13e05.q1k vc_2 920 1214 2164 2477 F 295 87.12 1365 reject_low 10 ALIGNMENT 0 YS2-13e05.p1k vc_1 920 77 2106 2105 C 844 0.00 1225 reject_low 4 ALIGNMENT 26 YS2-13e05.p1k vc_1 951 921 2441 2472 C 31 96.77 1225 reject_low 15 ALIGNMENT 166 YS2-13e05.p1k vc_3 1225 921 1800 2105 C 305 85.57 1225 reject_low 6 ALIGNMENT 0 YS2-13e05.p1k vc_1 920 77 2473 2472 C 844 0.00 1225 reject_low 15 ALIGNMENT 56 YS2-13e05.q1k vc_4 997 920 1454 1534 C 78 93.59 1365 reject_low 20 ALIGNMENT 42 YS2-13e05.q1k vc_3 920 879 2472 2513 C 42 100.00 1365 reject_low 19 ALIGNMENT 0 YS2-13e05.q1k vc_4 100 919 126 125 F 820 0.00 1365 reject_low 13 ALIGNMENT 159 YS2-13e05.q1k vc_3 920 1214 2531 2844 F 295 87.12 1365 reject_low 11 ALIGNMENT 778 YS2-13e05.p1k chr11 910 67 411854 412698 C 844 98.70 1225 accept_chi 1 ALIGNMENT 153 YS2-13e05.q1k vc_4 1200 920 5512 5812 C 281 87.90 1365 reject_low 12 ALIGNMENT 111 YS2-13e05.q1k vc_4 920 1074 6353 6513 F 155 92.26 1365|1,0 reject_low 14 ALIGNMENT 0 YS2-13e05.q1k vc_4 100 878 5830 5829 F 779 0.00 1365 reject_low 14 ALIGNMENT 0 YS2-13e05.q1k vc_5 881 100 37 36 C 782 0.00 1365 reject_low 23 ALIGNMENT 0 YS2-13e05.q1k vc_4 919 100 5813 5812 C 820 0.00 1365 reject_low 12 ALIGNMENT 0 YS2-13e05.q1k vc_3 100 919 2531 2530 F 820 0.00 1365 reject_low 11 ALIGNMENT 42 YS2-13e05.q1k vc_2 920 879 2105 2146 C 42 100.00 1365 reject_low 18 ALIGNMENT 0 YS2-13e05.p1k vc_3 920 77 2473 2472 C 844 0.00 1225 reject_low 16 ALIGNMENT 166 YS2-13e05.p1k vc_4 921 1225 5871 6176 F 305 85.57 1225 reject_low 7 ALIGNMENT 39 YS2-13e05.q1k vc_5 920 882 5025 5063 C 39 100.00 1365 reject_low 21 ALIGNMENT 111 YS2-13e05.q1k vc_4 920 1074 126 286 F 155 92.26 1365 reject_low 13 ALIGNMENT 159 YS2-13e05.q1k vc_1 920 1214 2531 2844 F 295 87.12 1365 reject_low 9 ALIGNMENT 26 YS2-13e05.p1k vc_3 951 921 2441 2472 C 31 96.77 1225 reject_low 16 ALIGNMENT 783 YS2-13e05.q1k chr11 32 880 411854 412702 F 849 98.70 1365 accept_chi 0 ALIGNMENT 166 YS2-13e05.p1k vc_7 921 1225 13562 13867 F 305 85.57 1225 reject_low 8 ALIGNMENT 0 YS2-13e05.q1k vc_1 100 919 2531 2530 F 820 0.00 1365 reject_low 9 ALIGNMENT 166 YS2-13e05.p1k vc_1 1225 921 1800 2105 C 305 85.57 1225 reject_low 4 ALIGNMENT 0 YS2-13e05.q1k vc_5 881 100 5064 5063 C 782 0.00 1365 reject_low 21 ALIGNMENT 38 YS2-13e05.q1k vc_7 883 920 13525 13562 F 38 100.00 1365 reject_low 22 ALIGNMENT 0 YS2-13e05.p1k vc_5 920 77 5026 5025 C 844 0.00 1225 reject_low 2 ALIGNMENT 166 YS2-13e05.p1k vc_7 921 1225 100 405 F 305 85.57 1225 reject_low 3 ALIGNMENT 42 YS2-13e05.q1k vc_4 879 920 5830 5871 F 42 100.00 1365 reject_low 14 ALIGNMENT 42 YS2-13e05.q1k vc_1 920 879 2472 2513 C 42 100.00 1365 reject_low 17 ALIGNMENT 158 YS2-13e05.q1k vc_7 1214 920 2414 2727 C 295 87.46 1365 reject_low 3 ALIGNMENT 0 YS2-13e05.q1k vc_7 100 882 13525 13524 F 783 0.00 1365 reject_low 22 ALIGNMENT 0 YS2-13e05.p1k vc_7 77 920 100 99 F 844 0.00 1225 reject_low 3 ALIGNMENT 166 YS2-13e05.p1k vc_2 1225 921 1800 2105 C 305 85.57 1225 reject_low 5 ALIGNMENT 0 YS2-13e05.p1k vc_4 77 920 5871 5870 F 844 0.00 1225 reject_low 7 ALIGNMENT 159 YS2-13e05.q1k vc_5 920 1214 2398 2711 F 295 87.12 1365 reject_low 2 ALIGNMENT 0 YS2-13e05.p1k vc_7 77 920 13562 13561 F 844 0.00 1225 reject_low 8 ALIGNMENT 0 YS2-13e05.q1k vc_7 919 100 2728 2727 C 820 0.00 1365 reject_low 3 ALIGNMENT 0 YS2-13e05.q1k vc_4 919 100 1535 1534 C 820 0.00 1365 reject_low 20 ALIGNMENT 0 YS2-13e05.p1k vc_3 920 77 2106 2105 C 844 0.00 1225 reject_low 6 ALIGNMENT 920 YS2-13e06.q1k chr10 43 1088 618981 620029 F 1046 96.75 1403 accept 0 ALIGNMENT 975 YS2-13e06.p1k chr10 1188 26 622605 623782 C 1163 95.27 1253 accept 0 ALIGNMENT 962 YS2-13e07.q1k chr07 1154 32 899647 900781 C 1123 96.62 1347 accept 0 ALIGNMENT 930 YS2-13e07.p1k chr07 30 1100 895991 897079 F 1071 97.20 1171 accept 0 ALIGNMENT 951 YS2-13e08.q1k chr12 1086 36 415559 416616 C 1051 97.15 1378 accept 0 ALIGNMENT 56 YS2-13e08.p1k chrm 195 281 29083 29169 F 87 93.10 1261 reject_low 1 ALIGNMENT 868 YS2-13e08.p1k chr12 31 1248 412457 413662 F 1218 92.61 1261 accept 0 ALIGNMENT 0 YS2-13e08.p1k chrm 282 794 29169 29168 F 513 0.00 1261 reject_low 1 ALIGNMENT 0 YS2-13e08.p1k chrm 62 194 29083 29082 F 133 0.00 1261 reject_low 1 ALIGNMENT 993 YS2-13e09.q1k chr10 31 1172 488276 489422 F 1142 96.76 1355 accept 0 ALIGNMENT 967 YS2-13e09.p1k chr16 1136 33 944527 945649 C 1104 96.65 1166 ambiguous_tel 4 ALIGNMENT 964 YS2-13e09.p1k chr07 1136 33 1087535 1088657 C 1104 96.56 1166 ambiguous_tel 7 ALIGNMENT 964 YS2-13e09.p1k chr16 33 1136 2220 3342 F 1104 96.56 1166 ambiguous_tel 12 ALIGNMENT 957 YS2-13e09.p1k chr08 1136 33 558980 560103 C 1104 96.38 1166 ambiguous_tel 15 ALIGNMENT 964 YS2-13e09.p1k chr15 1136 33 1087794 1088916 C 1104 96.56 1166 ambiguous_tel 11 ALIGNMENT 931 YS2-13e09.p1k chr08 35 1136 2257 3382 F 1102 95.64 1166 ambiguous_tel 19 ALIGNMENT 957 YS2-13e09.p1k chr02 33 1136 2728 3851 F 1104 96.38 1166 ambiguous_tel 14 ALIGNMENT 967 YS2-13e09.p1k chr12 1136 33 1068167 1069289 C 1104 96.65 1166 ambiguous_tel 3 ALIGNMENT 964 YS2-13e09.p1k chr13 33 1136 2404 3526 F 1104 96.56 1166 ambiguous_tel 9 ALIGNMENT 964 YS2-13e09.p1k chr12 1136 33 1074830 1075952 C 1104 96.56 1166 ambiguous_tel 8 ALIGNMENT 964 YS2-13e09.p1k chr14 33 1136 2311 3433 F 1104 96.56 1166 ambiguous_tel 10 ALIGNMENT 964 YS2-13e09.p1k chr05 1136 33 573458 574580 C 1104 96.56 1166 ambiguous_tel 6 ALIGNMENT 967 YS2-13e09.p1k chr12 33 1136 8063 9185 F 1104 96.65 1166 ambiguous_tel 2 ALIGNMENT 958 YS2-13e09.p1k chr06 33 1136 1565 2687 F 1104 96.38 1166 ambiguous_tel 13 ALIGNMENT 967 YS2-13e09.p1k chr12 33 1136 2528 3650 F 1104 96.65 1166 ambiguous_tel 1 ALIGNMENT 943 YS2-13e09.p1k chr10 33 1136 2682 3804 F 1104 95.92 1166 ambiguous_tel 18 ALIGNMENT 946 YS2-13e09.p1k chr05 33 1136 2375 3497 F 1104 96.01 1166 ambiguous_tel 16 ALIGNMENT 964 YS2-13e09.p1k chr04 1136 33 1528629 1529751 C 1104 96.56 1166 ambiguous_tel 5 ALIGNMENT 946 YS2-13e09.p1k chr09 33 1136 2699 3821 F 1104 96.01 1166 ambiguous_tel 17 ALIGNMENT 878 YS2-13e10.p1k chr05 985 27 392038 393010 C 959 98.23 1180 accept 0 ALIGNMENT 979 YS2-13e10.q1k chr05 29 1133 391647 392768 F 1105 97.19 1379 accept 0 ALIGNMENT 1005 YS2-13e11.p1k chr12 31 1200 170700 171874 F 1170 96.41 1202 accept 0 ALIGNMENT 945 YS2-13e11.q1k chr12 1179 43 174162 175304 C 1137 95.51 1362 accept 0 ALIGNMENT 935 YS2-13e12.q1k chr11 1108 32 636223 637305 C 1077 96.19 1326 accept 0 ALIGNMENT 979 YS2-13e12.p1k chr11 25 1163 631334 632484 F 1139 95.87 1238 accept 0 ALIGNMENT 943 YS2-13e14.q1k chr10 1099 37 282364 283447 C 1063 97.27 1373 accept 0 ALIGNMENT 989 YS2-13e14.p1k chr10 31 1184 278094 279255 F 1154 95.58 1250 accept 0 ALIGNMENT 706 YS2-13e15.p1k scplasm1 1084 25 1634 2698 C 1060 89.53 1171 accept_chi 0 ALIGNMENT 219 YS2-13e15.q1k scplasm1 320 2 5992 6318 C 319 90.60 520 accept_chi 2 ALIGNMENT 220 YS2-13e15.q1k vc_6 320 1 5685 6012 C 320 90.62 520 reject_vc 1 ALIGNMENT 41 YS2-13e17.q1k vc_3 722 682 2472 2512 C 41 100.00 722 reject_low 3 ALIGNMENT 0 YS2-13e17.q1k vc_4 62 681 5831 5830 F 620 0.00 722 reject_low 4 ALIGNMENT 0 YS2-13e17.q1k chr09 722 683 259348 259347 C 40 0.00 722 accept_chi 0 ALIGNMENT 39 YS2-13e17.q1k vc_5 722 684 5025 5063 C 39 100.00 722 reject_low 5 ALIGNMENT 0 YS2-13e17.p1k chr09 721 738 259999 259998 F 18 0.00 738 accept_chi 1 ALIGNMENT 36 YS2-13e17.q1k vc_5 719 684 1 36 C 36 100.00 722 reject_low 7 ALIGNMENT 611 YS2-13e17.q1k chr09 682 30 259347 259999 C 653 99.23 722 accept_chi 0 ALIGNMENT 38 YS2-13e17.q1k vc_7 685 722 13525 13562 F 38 100.00 722 reject_low 6 ALIGNMENT 0 YS2-13e17.q1k vc_3 681 62 2513 2512 C 620 0.00 722 reject_low 3 ALIGNMENT 0 YS2-13e17.q1k vc_5 683 62 5064 5063 C 622 0.00 722 reject_low 5 ALIGNMENT 0 YS2-13e17.q1k vc_7 62 684 13525 13524 F 623 0.00 722 reject_low 6 ALIGNMENT 0 YS2-13e17.q1k vc_1 681 62 2513 2512 C 620 0.00 722 reject_low 2 ALIGNMENT 0 YS2-13e17.q1k vc_5 683 62 37 36 C 622 0.00 722 reject_low 7 ALIGNMENT 41 YS2-13e17.q1k vc_1 722 682 2472 2512 C 41 100.00 722 reject_low 2 ALIGNMENT 609 YS2-13e17.p1k chr09 66 720 259347 259999 F 655 99.08 738 accept_chi 1 ALIGNMENT 41 YS2-13e17.q1k vc_4 682 722 5831 5871 F 41 100.00 722 reject_low 4 ALIGNMENT 837 YS2-13e20.q1k chr05 1052 30 383611 384637 C 1023 95.41 1338 accept 0 ALIGNMENT 885 YS2-13e20.p1k chr05 34 1078 383540 384579 F 1045 96.46 1238 accept 0 ALIGNMENT 824 YS2-13e21.q1k chr09 36 1046 159726 160744 F 1011 94.46 1239 accept 0 ALIGNMENT 967 YS2-13e21.p1k chr09 1184 62 161980 163101 C 1123 96.17 1184 accept 0 ALIGNMENT 916 YS2-13e22.q1k chr16 1130 31 755974 757099 C 1100 95.55 1304 accept 0 ALIGNMENT 1011 YS2-13e22.p1k chr16 35 1221 753660 754849 F 1187 95.96 1245 accept 0 ALIGNMENT 41 YS2-13e23.q1k vc_3 259 219 2472 2512 C 41 100.00 259 reject_low 3 ALIGNMENT 0 YS2-13e23.p1k chr08 243 261 458740 458739 F 19 0.00 261 accept_chi 1 ALIGNMENT 38 YS2-13e23.q1k vc_7 222 259 13525 13562 F 38 100.00 259 reject_low 6 ALIGNMENT 39 YS2-13e23.q1k vc_5 259 221 5025 5063 C 39 100.00 259 reject_low 5 ALIGNMENT 0 YS2-13e23.q1k vc_5 220 97 5064 5063 C 124 0.00 259 reject_low 5 ALIGNMENT 0 YS2-13e23.q1k vc_7 97 221 13525 13524 F 125 0.00 259 reject_low 6 ALIGNMENT 41 YS2-13e23.q1k vc_1 259 219 2472 2512 C 41 100.00 259 reject_low 2 ALIGNMENT 0 YS2-13e23.q1k vc_4 97 218 5831 5830 F 122 0.00 259 reject_low 4 ALIGNMENT 0 YS2-13e23.q1k vc_5 220 97 37 36 C 124 0.00 259 reject_low 7 ALIGNMENT 0 YS2-13e23.q1k vc_1 218 97 2513 2512 C 122 0.00 259 reject_low 2 ALIGNMENT 36 YS2-13e23.q1k vc_5 256 221 1 36 C 36 100.00 259 reject_low 7 ALIGNMENT 164 YS2-13e23.p1k chr08 61 242 458560 458740 F 182 97.25 261 accept_chi 1 ALIGNMENT 0 YS2-13e23.q1k chr08 259 219 458561 458560 C 41 0.00 259 accept_chi 0 ALIGNMENT 170 YS2-13e23.q1k chr08 218 38 458560 458740 C 181 98.34 259 accept_chi 0 ALIGNMENT 41 YS2-13e23.q1k vc_4 219 259 5831 5871 F 41 100.00 259 reject_low 4 ALIGNMENT 0 YS2-13e23.q1k vc_3 218 97 2513 2512 C 122 0.00 259 reject_low 3 ALIGNMENT 1004 YS2-13e24.q1k chr15 1218 31 222102 223299 C 1188 96.04 1334 accept 0 ALIGNMENT 1001 YS2-13e24.p1k chr15 30 1178 219309 220449 F 1149 96.52 1190 accept 0 ALIGNMENT 37 YS2-13f01.q1k vc_5 200 161 1 40 C 40 97.50 203 reject_low 6 ALIGNMENT 0 YS2-13f01.q1k vc_5 160 62 41 40 C 99 0.00 203 reject_low 6 ALIGNMENT 41 YS2-13f01.q1k vc_1 203 163 2472 2512 C 41 100.00 203 reject_low 1 ALIGNMENT 0 YS2-13f01.q1k vc_4 62 162 5831 5830 F 101 0.00 203 reject_low 3 ALIGNMENT 38 YS2-13f01.q1k vc_7 166 203 13525 13562 F 38 100.00 203 reject_low 5 ALIGNMENT 41 YS2-13f01.q1k vc_4 163 203 5831 5871 F 41 100.00 203 reject_low 3 ALIGNMENT 40 YS2-13f01.q1k vc_5 203 161 5025 5067 C 43 97.67 203 reject_low 4 ALIGNMENT 0 YS2-13f01.q1k vc_1 162 62 2513 2512 C 101 0.00 203 reject_low 1 ALIGNMENT 0 YS2-13f01.q1k vc_3 162 62 2513 2512 C 101 0.00 203 reject_low 2 ALIGNMENT 0 YS2-13f01.q1k vc_7 62 165 13525 13524 F 104 0.00 203 reject_low 5 ALIGNMENT 0 YS2-13f01.q1k chr11 203 163 234286 234285 C 41 0.00 203 accept 0 ALIGNMENT 127 YS2-13f01.q1k chr11 162 33 234285 234414 C 130 100.00 203 accept 0 ALIGNMENT 0 YS2-13f01.q1k vc_5 160 62 5068 5067 C 99 0.00 203 reject_low 4 ALIGNMENT 41 YS2-13f01.q1k vc_3 203 163 2472 2512 C 41 100.00 203 reject_low 2 ALIGNMENT 471 YS2-13f02.p1k chr12 776 25 234951 235711 C 752 88.70 1113 accept 0 ALIGNMENT 967 YS2-13f02.q1k chr12 39 1142 229992 231101 F 1104 96.74 1365 accept 0 ALIGNMENT 0 YS2-13f03.q1k chrm 62 910 46314 46313 F 849 0.00 1346 reject_low 44 ALIGNMENT 0 YS2-13f03.q1k chrm 62 891 2076 2075 F 830 0.00 1346 reject_low 24 ALIGNMENT 37 YS2-13f03.q1k chrm 960 887 4530 4602 C 74 85.14 1346 reject_low 2,9 ALIGNMENT 39 YS2-13f03.p1k chrm 433 372 2076 2136 C 62 88.71 1222 reject_low 17 ALIGNMENT 27 YS2-13f03.q1k chrm 987 887 51 154 C 101 77.23 1346 reject_low 8 ALIGNMENT 28 YS2-13f03.q1k chrm 911 954 10745 10788 F 44 88.64 1346 reject_low 40 ALIGNMENT 36 YS2-13f03.q1k chrm 890 959 76573 76642 F 70 84.29 1346 reject_low 22 ALIGNMENT 30 YS2-13f03.q1k chrm 892 945 2076 2128 F 54 85.19 1346 reject_low 24 ALIGNMENT 36 YS2-13f03.p1k chrm 369 413 57027 57071 F 45 95.56 1222 reject_low 13 ALIGNMENT 22 YS2-13f03.q1k chrm 912 955 52772 52815 F 44 84.09 1346 reject_low 47 ALIGNMENT 0 YS2-13f03.q1k chrm 62 906 34930 34929 F 845 0.00 1346 reject_low 33 ALIGNMENT 0 YS2-13f03.p1k chrm 366 62 10440 10439 C 305 0.00 1222 reject_low 7 ALIGNMENT 0 YS2-13f03.q1k chrm 62 911 10394 10393 F 850 0.00 1346 reject_low 42 ALIGNMENT 0 YS2-13f03.p1k chrm 62 368 57027 57026 F 307 0.00 1222 reject_low 13 ALIGNMENT 0 YS2-13f03.p1k chrm 419 913 47521 47520 F 495 0.00 1222 reject_low 18 ALIGNMENT 0 YS2-13f03.p1k chrm 62 370 67946 67945 F 309 0.00 1222 reject_low 14 ALIGNMENT 0 YS2-13f03.q1k chrm 909 62 75665 75664 C 848 0.00 1346 reject_low 31 ALIGNMENT 28 YS2-13f03.q1k chrm 912 954 73011 73052 F 43 90.70 1346 reject_low 41 ALIGNMENT 32 YS2-13f03.q1k chrm 902 955 9022 9075 F 54 85.19 1346 reject_low 29 ALIGNMENT 34 YS2-13f03.p1k chrm 413 367 10394 10439 C 47 93.62 1222 reject_low 7 ALIGNMENT 40 YS2-13f03.p1k chrm 414 367 34286 34333 C 48 95.83 1222 reject_low 19 ALIGNMENT 0 YS2-13f03.q1k chrm 62 911 73011 73010 F 850 0.00 1346 reject_low 41 ALIGNMENT 0 YS2-13f03.p1k chrm 414 913 57071 57070 F 500 0.00 1222 reject_low 13 ALIGNMENT 34 YS2-13f03.q1k chrm 959 907 9484 9536 C 53 86.79 1346 reject_low 28 ALIGNMENT 34 YS2-13f03.p1k chrm 414 372 46314 46356 C 43 95.35 1222 reject_low 16 ALIGNMENT 0 YS2-13f03.q1k chrm 62 906 69049 69048 F 845 0.00 1346 reject_low 39 ALIGNMENT 0 YS2-13f03.p1k chrm 62 368 2749 2748 F 307 0.00 1222 reject_low 9 ALIGNMENT 0 YS2-13f03.p1k chrm 913 415 34287 34286 C 499 0.00 1222 reject_low 19 ALIGNMENT 30 YS2-13f03.q1k chrm 906 955 69438 69487 F 50 86.00 1346 reject_low 34 ALIGNMENT 0 YS2-13f03.q1k chrm 906 62 2799 2798 C 845 0.00 1346 reject_low 35 ALIGNMENT 33 YS2-13f03.q1k chrm 959 910 75615 75664 C 50 88.00 1346 reject_low 31 ALIGNMENT 644 YS2-13f03.q1k chrm 39 760 79301 80022 F 722 99.03 1346 reject_bad_break 0 ALIGNMENT 26 YS2-13f03.q1k chrm 911 945 62861 62895 F 35 91.43 1346 reject_low 45 ALIGNMENT 47 YS2-13f03.p1k chrm 365 438 4530 4602 F 74 89.19 1222 reject_low 4 ALIGNMENT 0 YS2-13f03.p1k chrm 371 62 46357 46356 C 310 0.00 1222 reject_low 16 ALIGNMENT 0 YS2-13f03.q1k chrm 62 891 66809 66808 F 830 0.00 1346 reject_low 26 ALIGNMENT 30 YS2-13f03.q1k chrm 907 958 34930 34981 F 52 84.62 1346 reject_low 33 ALIGNMENT 45 YS2-13f03.q1k chrm 910 976 77670 77735 F 67 88.06 1346 reject_low 20 ALIGNMENT 0 YS2-13f03.q1k chrm 886 62 155 154 C 825 0.00 1346 reject_low 8 ALIGNMENT 0 YS2-13f03.q1k chrm 62 911 52772 52771 F 850 0.00 1346 reject_low 47 ALIGNMENT 0 YS2-13f03.q1k chrm 888 62 71276 71275 C 827 0.00 1346 reject_low 13,14 ALIGNMENT 0 YS2-13f03.q1k chrm 906 62 9537 9536 C 845 0.00 1346 reject_low 28 ALIGNMENT 36 YS2-13f03.q1k chrm 960 911 12262 12311 C 50 90.00 1346 reject_low 4 ALIGNMENT 39 YS2-13f03.p1k chrm 349 438 63 154 F 90 83.33 1222 reject_low 2 ALIGNMENT 0 YS2-13f03.p1k chrm 366 62 34334 34333 C 305 0.00 1222 reject_low 19 ALIGNMENT 0 YS2-13f03.p1k chrm 415 913 67989 67988 F 499 0.00 1222 reject_low 14 ALIGNMENT 33 YS2-13f03.p1k chrm 371 414 67946 67989 F 44 93.18 1222 reject_low 14 ALIGNMENT 0 YS2-13f03.p1k chrm 913 415 46315 46314 C 499 0.00 1222 reject_low 16 ALIGNMENT 0 YS2-13f03.q1k chrm 886 62 4603 4602 C 825 0.00 1346 reject_low 2,9 ALIGNMENT 34 YS2-13f03.p1k chrm 414 372 62861 62903 C 43 95.35 1222 reject_low 11 ALIGNMENT 462 YS2-13f03.p1k chrm 1212 565 79365 80022 C 648 93.21 1222 reject_bad_break 0 ALIGNMENT 0 YS2-13f03.q1k chrm 62 910 10745 10744 F 849 0.00 1346 reject_low 40 ALIGNMENT 47 YS2-13f03.p1k chrm 438 349 8211 8299 C 90 85.56 1222 reject_low 1 ALIGNMENT 0 YS2-13f03.p1k chrm 366 62 69100 69099 C 305 0.00 1222 reject_low 15 ALIGNMENT 28 YS2-13f03.q1k chrm 945 907 47483 47521 C 39 89.74 1346 reject_low 38 ALIGNMENT 0 YS2-13f03.p1k chrm 415 913 12311 12310 F 499 0.00 1222 reject_low 21 ALIGNMENT 38 YS2-13f03.p1k chrm 371 418 47474 47521 F 48 93.75 1222 reject_low 18 ALIGNMENT 0 YS2-13f03.q1k chrm 910 62 67990 67989 C 849 0.00 1346 reject_low 46 ALIGNMENT 0 YS2-13f03.p1k chrm 439 913 4602 4601 F 475 0.00 1222 reject_low 4 ALIGNMENT 0 YS2-13f03.p1k chrm 913 435 43078 43077 C 479 0.00 1222 reject_low 3 ALIGNMENT 37 YS2-13f03.q1k chrm 900 958 11494 11552 F 59 86.44 1346 reject_low 25 ALIGNMENT 0 YS2-13f03.p1k chrm 62 370 47474 47473 F 309 0.00 1222 reject_low 18 ALIGNMENT 0 YS2-13f03.p1k chrm 564 177 80023 80164 C 388 0.00 1222 reject_bad_break 0 ALIGNMENT 0 YS2-13f03.p1k chrm 370 62 10789 10788 C 309 0.00 1222 reject_low 6 ALIGNMENT 0 YS2-13f03.q1k chrm 906 62 47522 47521 C 845 0.00 1346 reject_low 38 ALIGNMENT 0 YS2-13f03.q1k chrm 62 912 53828 53827 F 851 0.00 1346 reject_low 37 ALIGNMENT 0 YS2-13f03.p1k chrm 913 415 62862 62861 C 499 0.00 1222 reject_low 11 ALIGNMENT 38 YS2-13f03.p1k chrm 418 367 69049 69099 C 52 92.31 1222 reject_low 15 ALIGNMENT 0 YS2-13f03.q1k chrm 62 889 76573 76572 F 828 0.00 1346 reject_low 22 ALIGNMENT 28 YS2-13f03.q1k chrm 892 945 66809 66860 F 54 85.19 1346 reject_low 26 ALIGNMENT 25 YS2-13f03.p1k chrm 176 149 80165 80192 C 28 96.43 1222 reject_bad_break 0 ALIGNMENT 30 YS2-13f03.q1k chrm 955 901 31038 31092 C 55 85.45 1346 reject_low 30 ALIGNMENT 29 YS2-13f03.q1k chrm 902 945 48093 48135 F 44 88.64 1346 reject_low 32 ALIGNMENT 33 YS2-13f03.q1k chrm 911 966 64516 64571 F 56 83.93 1346 reject_low 15 ALIGNMENT 0 YS2-13f03.q1k chrm 911 62 52374 52373 C 850 0.00 1346 reject_low 43 ALIGNMENT 0 YS2-13f03.q1k chrm 62 910 29840 29839 F 849 0.00 1346 reject_low 3,19 ALIGNMENT 0 YS2-13f03.q1k chrm 62 910 34286 34285 F 849 0.00 1346 reject_low 36 ALIGNMENT 0 YS2-13f03.q1k chrm 910 62 12312 12311 C 849 0.00 1346 reject_low 4 ALIGNMENT 0 YS2-13f03.q1k chrm 761 911 80022 80021 F 151 0.00 1346 reject_bad_break 0 ALIGNMENT 0 YS2-13f03.q1k chrm 900 62 31093 31092 C 839 0.00 1346 reject_low 30 ALIGNMENT 0 YS2-13f03.p1k chrm 364 62 53876 53875 C 303 0.00 1222 reject_low 12 ALIGNMENT 0 YS2-13f03.p1k chrm 913 434 2077 2076 C 480 0.00 1222 reject_low 17 ALIGNMENT 0 YS2-13f03.q1k chrm 62 890 43077 43076 F 829 0.00 1346 reject_low 10,12,16 ALIGNMENT 30 YS2-13f03.q1k chrm 911 958 34286 34333 F 48 87.50 1346 reject_low 36 ALIGNMENT 0 YS2-13f03.p1k chrm 371 62 48144 48143 C 310 0.00 1222 reject_low 10 ALIGNMENT 0 YS2-13f03.q1k chrm 62 910 62861 62860 F 849 0.00 1346 reject_low 45 ALIGNMENT 0 YS2-13f03.q1k chrm 62 909 77670 77669 F 848 0.00 1346 reject_low 20 ALIGNMENT 26 YS2-13f03.q1k chrm 911 945 46314 46348 F 35 91.43 1346 reject_low 44 ALIGNMENT 0 YS2-13f03.p1k chrm 348 62 8300 8299 C 287 0.00 1222 reject_low 1 ALIGNMENT 0 YS2-13f03.q1k chrm 62 888 11025 11024 F 827 0.00 1346 reject_low 23 ALIGNMENT 0 YS2-13f03.p1k chrm 353 62 43158 43157 C 292 0.00 1222 reject_low 3 ALIGNMENT 0 YS2-13f03.p1k chrm 913 424 48094 48093 C 490 0.00 1222 reject_low 10 ALIGNMENT 0 YS2-13f03.p1k chrm 62 364 4530 4529 F 303 0.00 1222 reject_low 4 ALIGNMENT 37 YS2-13f03.p1k chrm 412 365 53828 53875 C 48 93.75 1222 reject_low 12 ALIGNMENT 26 YS2-13f03.q1k chrm 945 911 67955 67989 C 35 91.43 1346 reject_low 46 ALIGNMENT 0 YS2-13f03.p1k chrm 913 415 64517 64516 C 499 0.00 1222 reject_low 5 ALIGNMENT 40 YS2-13f03.p1k chrm 414 359 64516 64571 C 56 91.07 1222 reject_low 5 ALIGNMENT 36 YS2-13f03.q1k chrm 887 976 8211 8299 F 90 80.00 1346 reject_low 6,7 ALIGNMENT 0 YS2-13f03.q1k chrm 911 62 57072 57071 C 850 0.00 1346 reject_low 18 ALIGNMENT 0 YS2-13f03.p1k chrm 913 439 8212 8211 C 475 0.00 1222 reject_low 1 ALIGNMENT 0 YS2-13f03.q1k chrm 62 899 11494 11493 F 838 0.00 1346 reject_low 25 ALIGNMENT 28 YS2-13f03.q1k chrm 907 945 69049 69087 F 39 89.74 1346 reject_low 39 ALIGNMENT 0 YS2-13f03.q1k chrm 62 897 35794 35793 F 836 0.00 1346 reject_low 27 ALIGNMENT 32 YS2-13f03.q1k chrm 911 957 29840 29886 F 47 89.36 1346 reject_low 3,19 ALIGNMENT 0 YS2-13f03.q1k chrm 62 906 50106 50105 F 845 0.00 1346 reject_low 5,11 ALIGNMENT 27 YS2-13f03.q1k chrm 913 960 53828 53875 F 48 85.42 1346 reject_low 37 ALIGNMENT 0 YS2-13f03.p1k chrm 913 419 69050 69049 C 495 0.00 1222 reject_low 15 ALIGNMENT 0 YS2-13f03.q1k chrm 62 886 8211 8210 F 825 0.00 1346 reject_low 6,7 ALIGNMENT 30 YS2-13f03.q1k chrm 956 907 2749 2798 C 50 86.00 1346 reject_low 35 ALIGNMENT 40 YS2-13f03.q1k chrm 891 960 43077 43145 F 70 85.71 1346 reject_low 10,12,16 ALIGNMENT 32 YS2-13f03.q1k chrm 906 972 3054 3120 F 67 80.60 1346 reject_low 1 ALIGNMENT 39 YS2-13f03.q1k chrm 963 889 71204 71275 C 75 84.00 1346 reject_low 13,14 ALIGNMENT 0 YS2-13f03.p1k chrm 62 348 63 62 F 287 0.00 1222 reject_low 2 ALIGNMENT 0 YS2-13f03.p1k chrm 913 414 10395 10394 C 500 0.00 1222 reject_low 7 ALIGNMENT 29 YS2-13f03.q1k chrm 898 955 35794 35849 F 58 84.48 1346 reject_low 27 ALIGNMENT 0 YS2-13f03.p1k chrm 419 913 2798 2797 F 495 0.00 1222 reject_low 9 ALIGNMENT 36 YS2-13f03.q1k chrm 907 976 50106 50174 F 70 82.86 1346 reject_low 5,11 ALIGNMENT 24 YS2-13f03.q1k chrm 912 958 10394 10439 F 47 85.11 1346 reject_low 42 ALIGNMENT 0 YS2-13f03.p1k chrm 439 913 154 153 F 475 0.00 1222 reject_low 2 ALIGNMENT 0 YS2-13f03.q1k chrm 62 905 3054 3053 F 844 0.00 1346 reject_low 1 ALIGNMENT 40 YS2-13f03.p1k chrm 369 418 2749 2798 F 50 94.00 1222 reject_low 9 ALIGNMENT 0 YS2-13f03.p1k chrm 371 62 62904 62903 C 310 0.00 1222 reject_low 11 ALIGNMENT 30 YS2-13f03.q1k chrm 889 945 11025 11080 F 57 85.96 1346 reject_low 23 ALIGNMENT 0 YS2-13f03.p1k chrm 371 62 2137 2136 C 310 0.00 1222 reject_low 17 ALIGNMENT 44 YS2-13f03.p1k chrm 434 354 43077 43157 C 81 86.42 1222 reject_low 3 ALIGNMENT 0 YS2-13f03.p1k chrm 913 413 53829 53828 C 501 0.00 1222 reject_low 12 ALIGNMENT 25 YS2-13f03.q1k chrm 955 912 52330 52373 C 44 86.36 1346 reject_low 43 ALIGNMENT 0 YS2-13f03.p1k chrm 913 415 10746 10745 C 499 0.00 1222 reject_low 6 ALIGNMENT 0 YS2-13f03.q1k chrm 62 901 48093 48092 F 840 0.00 1346 reject_low 32 ALIGNMENT 36 YS2-13f03.p1k chrm 414 371 10745 10788 C 44 95.45 1222 reject_low 6 ALIGNMENT 0 YS2-13f03.p1k chrm 148 62 80193 80192 C 87 0.00 1222 reject_bad_break 0 ALIGNMENT 0 YS2-13f03.q1k chrm 62 901 9022 9021 F 840 0.00 1346 reject_low 29 ALIGNMENT 43 YS2-13f03.p1k chrm 365 414 12262 12311 F 50 96.00 1222 reject_low 21 ALIGNMENT 0 YS2-13f03.p1k chrm 358 62 64572 64571 C 297 0.00 1222 reject_low 5 ALIGNMENT 0 YS2-13f03.q1k chrm 62 905 69438 69437 F 844 0.00 1346 reject_low 34 ALIGNMENT 0 YS2-13f03.q1k chrm 62 910 64516 64515 F 849 0.00 1346 reject_low 15 ALIGNMENT 0 YS2-13f03.p1k chrm 62 364 12262 12261 F 303 0.00 1222 reject_low 21 ALIGNMENT 38 YS2-13f03.p1k chrm 423 372 48093 48143 C 52 92.31 1222 reject_low 10 ALIGNMENT 29 YS2-13f03.q1k chrm 965 912 57017 57071 C 54 83.33 1346 reject_low 18 ALIGNMENT 1000 YS2-13f04.p1k chr09 1201 49 347533 348685 C 1153 96.70 1205 accept 0 ALIGNMENT 976 YS2-13f04.q1k chr09 31 1142 347230 348357 F 1112 97.30 1388 accept 0 ALIGNMENT 0 YS2-13f05.p1k chr05 481 499 274199 274198 F 19 0.00 499 accept_chi 1 ALIGNMENT 425 YS2-13f05.p1k chr05 29 480 273747 274199 F 452 99.34 499 accept_chi 1 ALIGNMENT 0 YS2-13f05.q1k chr05 549 491 273748 273747 C 59 0.00 1427 accept_chi 0 ALIGNMENT 429 YS2-13f05.q1k chr05 490 38 273747 274199 C 453 99.56 1427 accept_chi 0 ALIGNMENT 881 YS2-13f06.p1k chr07 27 1079 656622 657691 F 1053 95.82 1207 accept_chi 1 ALIGNMENT 942 YS2-13f06.q1k chr16 38 1062 914020 915052 F 1025 97.66 1367 accept_chi 0 ALIGNMENT 0 YS2-13f07.p1k chrm 281 726 29169 29168 F 446 0.00 1205 reject_low 1 ALIGNMENT 908 YS2-13f07.q1k chr12 1057 29 415578 416616 C 1029 96.89 1381 accept 0 ALIGNMENT 745 YS2-13f07.p1k chr12 29 1086 412457 413512 F 1058 92.91 1205 accept 0 ALIGNMENT 0 YS2-13f07.p1k chrm 62 193 29083 29082 F 132 0.00 1205 reject_low 1 ALIGNMENT 56 YS2-13f07.p1k chrm 194 280 29083 29169 F 87 93.10 1205 reject_low 1 ALIGNMENT 990 YS2-13f10.q1k chr12 39 1220 229992 231176 F 1182 95.26 1440 accept 0 ALIGNMENT 942 YS2-13f10.p1k chr12 1146 30 234583 235711 C 1117 95.52 1248 accept 0 ALIGNMENT 928 YS2-13f11.q1k chr13 1074 31 733005 734053 C 1044 97.41 1356 accept 0 ALIGNMENT 954 YS2-13f11.p1k chr13 31 1188 728555 729724 F 1158 95.25 1259 accept 0 ALIGNMENT 883 YS2-13f12.p1k chr07 30 1073 184468 185525 F 1044 95.98 1229 accept 0 ALIGNMENT 918 YS2-13f12.q1k chr07 1090 30 188875 189942 C 1061 95.38 1360 accept 0 ALIGNMENT 79 YS2-13f13.p1k chr04 131 43 645142 645230 C 89 96.63 1255 reject_low 1 ALIGNMENT 0 YS2-13f13.p1k chr08 131 835 134390 134389 F 705 0.00 1255 reject_low 6 ALIGNMENT 0 YS2-13f13.p1k chr04 835 134 802718 802717 C 702 0.00 1255 reject_low 5 ALIGNMENT 75 YS2-13f13.p1k chr08 54 130 134314 134390 F 77 100.00 1255 reject_low 6 ALIGNMENT 72 YS2-13f13.p1k chr12 130 54 448646 448722 C 77 98.70 1255 reject_low 7 ALIGNMENT 75 YS2-13f13.p1k chr04 54 133 520968 521047 F 80 98.75 1255 reject_low 4 ALIGNMENT 0 YS2-13f13.p1k chr04 835 132 645143 645142 C 704 0.00 1255 reject_low 1 ALIGNMENT 60 YS2-13f13.p1k chr13 126 54 808244 808316 C 73 94.52 1255 reject_low 9 ALIGNMENT 0 YS2-13f13.p1k chr04 134 835 521047 521046 F 702 0.00 1255 reject_low 4 ALIGNMENT 0 YS2-13f13.p1k chr12 835 131 448647 448646 C 705 0.00 1255 reject_low 7 ALIGNMENT 0 YS2-13f13.p1k chr03 835 131 168292 168291 C 705 0.00 1255 reject_low 3 ALIGNMENT 0 YS2-13f13.p1k chr05 835 135 131074 131073 C 701 0.00 1255 reject_low 8 ALIGNMENT 74 YS2-13f13.p1k chr04 133 54 802717 802797 C 80 98.75 1255 reject_low 5 ALIGNMENT 977 YS2-13f13.p1k chr05 38 1242 250269 251479 F 1205 94.61 1255 accept 0 ALIGNMENT 0 YS2-13f13.p1k chr02 145 835 350917 350916 F 691 0.00 1255 reject_low 2 ALIGNMENT 929 YS2-13f13.q1k chr05 1055 39 254033 255059 C 1017 98.03 1357 accept 0 ALIGNMENT 64 YS2-13f13.p1k chr02 59 144 350830 350917 F 86 93.02 1255 reject_low 2 ALIGNMENT 0 YS2-13f13.p1k chr13 835 127 808245 808244 C 709 0.00 1255 reject_low 9 ALIGNMENT 62 YS2-13f13.p1k chr05 134 59 131073 131148 C 76 94.74 1255 reject_low 8 ALIGNMENT 77 YS2-13f13.p1k chr03 130 52 168291 168369 C 79 100.00 1255 reject_low 3 ALIGNMENT 0 YS2-13f14.p1k chr13 62 900 375870 375869 F 839 0.00 1257 reject_low 21 ALIGNMENT 78 YS2-13f14.p1k chr04 1017 901 1098397 1098513 C 117 87.18 1257 reject_low 8 ALIGNMENT 0 YS2-13f14.p1k chr05 62 900 495665 495664 F 839 0.00 1257 reject_low 10 ALIGNMENT 0 YS2-13f14.p1k chr04 62 900 648667 648666 F 839 0.00 1257 reject_low 5 ALIGNMENT 0 YS2-13f14.p1k chr04 900 62 1209442 1209441 C 839 0.00 1257 reject_low 27 ALIGNMENT 78 YS2-13f14.p1k chr13 1017 901 198966 199082 C 117 87.18 1257 reject_low 19 ALIGNMENT 354 YS2-13f14.q1k chr04 599 1187 801738 802368 F 589 89.13 1395 reject_low 1 ALIGNMENT 0 YS2-13f14.p1k chr02 900 62 262322 262321 C 839 0.00 1257 reject_low 4 ALIGNMENT 78 YS2-13f14.p1k chr16 901 1017 853799 853915 F 117 87.18 1257 reject_low 26 ALIGNMENT 727 YS2-13f14.q1k chr04 42 931 801166 802094 F 890 94.83 1395 accept 0 ALIGNMENT 0 YS2-13f14.p1k chr04 62 900 989889 989888 F 839 0.00 1257 reject_low 7 ALIGNMENT 0 YS2-13f14.p1k chr04 900 62 1098514 1098513 C 839 0.00 1257 reject_low 8 ALIGNMENT 0 YS2-13f14.p1k chr16 62 900 807811 807810 F 839 0.00 1257 reject_low 24 ALIGNMENT 75 YS2-13f14.p1k chr04 1017 901 1209325 1209441 C 117 86.32 1257 reject_low 27 ALIGNMENT 78 YS2-13f14.p1k chr02 1017 901 262205 262321 C 117 87.18 1257 reject_low 4 ALIGNMENT 0 YS2-13f14.p1k chr07 900 62 538516 538515 C 839 0.00 1257 reject_low 11 ALIGNMENT 78 YS2-13f14.p1k chr15 1017 901 120337 120453 C 117 87.18 1257 reject_low 23 ALIGNMENT 78 YS2-13f14.p1k chr14 1017 901 521795 521911 C 117 87.18 1257 reject_low 22 ALIGNMENT 0 YS2-13f14.p1k chr13 900 62 199083 199082 C 839 0.00 1257 reject_low 19 ALIGNMENT 78 YS2-13f14.p1k chr01 901 1017 163412 163528 F 117 87.18 1257 reject_low 2 ALIGNMENT 78 YS2-13f14.p1k chr05 901 1017 446566 446682 F 117 87.18 1257 reject_low 9 ALIGNMENT 0 YS2-13f14.p1k chr14 900 62 521912 521911 C 839 0.00 1257 reject_low 22 ALIGNMENT 78 YS2-13f14.p1k chr12 901 1017 218255 218371 F 117 87.18 1257 reject_low 16 ALIGNMENT 78 YS2-13f14.p1k chr04 901 1017 648667 648783 F 117 87.18 1257 reject_low 5 ALIGNMENT 78 YS2-13f14.p1k chr07 901 1017 820566 820682 F 117 87.18 1257 reject_low 13 ALIGNMENT 0 YS2-13f14.p1k chr05 62 900 446566 446565 F 839 0.00 1257 reject_low 9 ALIGNMENT 0 YS2-13f14.p1k chr16 62 900 853799 853798 F 839 0.00 1257 reject_low 26 ALIGNMENT 78 YS2-13f14.p1k chr13 901 1017 375870 375986 F 117 87.18 1257 reject_low 21 ALIGNMENT 78 YS2-13f14.p1k chr04 901 1017 989889 990005 F 117 87.18 1257 reject_low 7 ALIGNMENT 0 YS2-13f14.p1k chr16 900 62 847163 847162 C 839 0.00 1257 reject_low 25 ALIGNMENT 78 YS2-13f14.p1k chr02 1017 901 223671 223787 C 117 87.18 1257 reject_low 3 ALIGNMENT 0 YS2-13f14.p1k chr10 900 62 475129 475128 C 839 0.00 1257 reject_low 15 ALIGNMENT 0 YS2-13f14.p1k chr12 62 900 218255 218254 F 839 0.00 1257 reject_low 16 ALIGNMENT 78 YS2-13f14.p1k chr07 1017 901 538399 538515 C 117 87.18 1257 reject_low 11 ALIGNMENT 78 YS2-13f14.p1k chr16 1017 901 847046 847162 C 117 87.18 1257 reject_low 25 ALIGNMENT 78 YS2-13f14.p1k chr08 901 1017 546778 546894 F 117 87.18 1257 reject_low 14 ALIGNMENT 0 YS2-13f14.p1k chr13 900 62 186916 186915 C 839 0.00 1257 reject_low 18 ALIGNMENT 78 YS2-13f14.p1k chr10 1017 901 475012 475128 C 117 87.18 1257 reject_low 15 ALIGNMENT 78 YS2-13f14.p1k chr07 901 1017 565017 565133 F 117 87.18 1257 reject_low 12 ALIGNMENT 0 YS2-13f14.p1k chr02 900 62 223788 223787 C 839 0.00 1257 reject_low 3 ALIGNMENT 0 YS2-13f14.p1k chr07 62 900 820566 820565 F 839 0.00 1257 reject_low 13 ALIGNMENT 78 YS2-13f14.p1k chr12 901 1017 479148 479264 F 117 87.18 1257 reject_low 17 ALIGNMENT 0 YS2-13f14.p1k chr12 62 900 479148 479147 F 839 0.00 1257 reject_low 17 ALIGNMENT 78 YS2-13f14.p1k chr13 1017 901 186799 186915 C 117 87.18 1257 reject_low 18 ALIGNMENT 0 YS2-13f14.q1k chr04 62 598 801738 801737 F 537 0.00 1395 reject_low 1 ALIGNMENT 78 YS2-13f14.p1k chr05 901 1017 495665 495781 F 117 87.18 1257 reject_low 10 ALIGNMENT 0 YS2-13f14.p1k chr15 900 62 120454 120453 C 839 0.00 1257 reject_low 23 ALIGNMENT 0 YS2-13f14.p1k chr08 62 900 546778 546777 F 839 0.00 1257 reject_low 14 ALIGNMENT 78 YS2-13f14.p1k chr13 901 1017 360172 360288 F 117 87.18 1257 reject_low 20 ALIGNMENT 888 YS2-13f14.p1k chr04 1017 38 805528 806507 C 980 97.24 1257 accept 0 ALIGNMENT 0 YS2-13f14.p1k chr04 62 900 881468 881467 F 839 0.00 1257 reject_low 6 ALIGNMENT 78 YS2-13f14.p1k chr04 901 1017 881468 881584 F 117 87.18 1257 reject_low 6 ALIGNMENT 0 YS2-13f14.p1k chr07 62 900 565017 565016 F 839 0.00 1257 reject_low 12 ALIGNMENT 0 YS2-13f14.p1k chr13 62 900 360172 360171 F 839 0.00 1257 reject_low 20 ALIGNMENT 78 YS2-13f14.p1k chr16 901 1017 807811 807927 F 117 87.18 1257 reject_low 24 ALIGNMENT 0 YS2-13f14.p1k chr01 62 900 163412 163411 F 839 0.00 1257 reject_low 2 ALIGNMENT 951 YS2-13f15.q1k chr10 41 1107 398914 399986 F 1067 97.09 1422 accept 0 ALIGNMENT 982 YS2-13f15.p1k chr10 1231 27 402788 403988 C 1205 94.61 1287 accept 0 ALIGNMENT 999 YS2-13f16.p1k chr07 26 1187 787931 789102 F 1162 96.21 1264 accept 0 ALIGNMENT 937 YS2-13f16.q1k chr07 1126 41 790822 791922 C 1086 96.32 1427 accept 0 ALIGNMENT 949 YS2-13f17.p1k chr14 57 1183 247355 248491 F 1127 95.30 1219 accept_chi 0 ALIGNMENT 177 YS2-13f17.q1k chr05 337 611 175098 175371 F 275 86.18 1131 accept_chi 1 ALIGNMENT 967 YS2-13f18.q1k chr04 1137 41 982820 983932 C 1097 97.17 1390 reject_low 13 ALIGNMENT 114 YS2-13f18.p1k chr03 943 1178 84297 84546 F 236 86.02 1227 reject_low 28 ALIGNMENT 985 YS2-13f18.q1k chr07 1137 41 813107 814219 C 1097 97.72 1390 reject_low 6 ALIGNMENT 117 YS2-13f18.p1k chr13 1178 943 168429 168678 C 236 86.44 1227 reject_low 27 ALIGNMENT 0 YS2-13f18.p1k chr06 62 942 137911 137910 F 881 0.00 1227 reject_low 1 ALIGNMENT 0 YS2-13f18.p1k chr03 942 62 168926 168925 C 881 0.00 1227 reject_low 29 ALIGNMENT 111 YS2-13f18.p1k chr15 1178 943 709772 710021 C 236 85.59 1227 reject_low 4 ALIGNMENT 111 YS2-13f18.p1k chr10 1178 943 354839 355088 C 236 85.59 1227 reject_low 37 ALIGNMENT 263 YS2-13f18.q1k chr14 46 1018 99749 100722 F 973 76.46 1390 reject_low 16 ALIGNMENT 117 YS2-13f18.p1k chr04 1178 943 513764 514013 C 236 86.44 1227 reject_low 25 ALIGNMENT 105 YS2-13f18.p1k chr02 943 1178 35271 35520 F 236 84.75 1227 reject_low 43 ALIGNMENT 114 YS2-13f18.p1k chr15 943 1178 970285 970534 F 236 86.02 1227 reject_low 3 ALIGNMENT 0 YS2-13f18.p1k chr02 62 942 35271 35270 F 881 0.00 1227 reject_low 43 ALIGNMENT 260 YS2-13f18.q1k chr13 1018 46 198138 199111 C 973 76.36 1390 reject_low 18 ALIGNMENT 979 YS2-13f18.q1k chr14 41 1137 565225 566337 F 1097 97.54 1390 reject_low 10 ALIGNMENT 0 YS2-13f18.p1k chr04 942 62 514014 514013 C 881 0.00 1227 reject_low 25 ALIGNMENT 0 YS2-13f18.p1k chr07 942 62 111507 111506 C 881 0.00 1227 reject_low 44 ALIGNMENT 973 YS2-13f18.q1k chr15 41 1137 707256 708368 F 1097 97.36 1390 reject_low 4 ALIGNMENT 263 YS2-13f18.q1k chr05 46 1018 446537 447510 F 973 76.46 1390 reject_low 15 ALIGNMENT 0 YS2-13f18.p1k chr16 62 942 211579 211578 F 881 0.00 1227 reject_low 42 ALIGNMENT 260 YS2-13f18.q1k chr13 1018 46 185971 186944 C 973 76.36 1390 reject_low 17 ALIGNMENT 973 YS2-13f18.q1k chr12 41 1137 978929 980041 F 1097 97.36 1390 reject_low 11 ALIGNMENT 0 YS2-13f18.p1k chr14 62 942 519167 519166 F 881 0.00 1227 reject_low 40 ALIGNMENT 0 YS2-13f18.p1k chr14 942 62 562363 562362 C 881 0.00 1227 reject_low 33 ALIGNMENT 0 YS2-13f18.p1k chr03 62 942 84297 84296 F 881 0.00 1227 reject_low 28 ALIGNMENT 102 YS2-13f18.p1k chr03 943 1153 84071 84293 F 211 86.26 1227 reject_low 45 ALIGNMENT 0 YS2-13f18.p1k chr03 62 942 82702 82701 F 881 0.00 1227 reject_low 47 ALIGNMENT 111 YS2-13f18.p1k chr10 1178 943 203783 204032 C 236 85.59 1227 reject_low 36 ALIGNMENT 0 YS2-13f18.p1k chr16 62 942 62392 62391 F 881 0.00 1227 reject_low 34 ALIGNMENT 970 YS2-13f18.q1k chr04 1137 41 873471 874583 C 1097 97.27 1390 reject_low 12 ALIGNMENT 0 YS2-13f18.p1k chr03 62 942 84813 84812 F 881 0.00 1227 reject_low 2 ALIGNMENT 111 YS2-13f18.p1k chr02 943 1178 9096 9345 F 236 85.59 1227 reject_low 35 ALIGNMENT 257 YS2-13f18.q1k chr07 46 1018 564988 565961 F 973 76.26 1390 reject_low 19 ALIGNMENT 0 YS2-13f18.p1k chr15 62 942 664817 664816 F 881 0.00 1227 reject_low 38 ALIGNMENT 0 YS2-13f18.p1k chr01 942 62 166161 166160 C 881 0.00 1227 reject_low 14 ALIGNMENT 108 YS2-13f18.p1k chr16 943 1178 211579 211828 F 236 85.17 1227 reject_low 42 ALIGNMENT 86 YS2-13f18.p1k chr01 1103 943 160404 160572 C 161 87.58 1227 reject_low 46 ALIGNMENT 976 YS2-13f18.q1k chr03 1137 41 86465 87577 C 1097 97.45 1390 reject_low 2 ALIGNMENT 0 YS2-13f18.p1k chr02 62 942 9096 9095 F 881 0.00 1227 reject_low 35 ALIGNMENT 117 YS2-13f18.p1k chr06 943 1178 143538 143787 F 236 86.44 1227 reject_low 26 ALIGNMENT 877 YS2-13f18.p1k chr16 940 34 525663 526569 C 907 99.01 1227 accept 0 ALIGNMENT 108 YS2-13f18.p1k chr14 943 1178 519167 519416 F 236 85.17 1227 reject_low 40 ALIGNMENT 0 YS2-13f18.p1k chr14 62 942 524733 524732 F 881 0.00 1227 reject_low 41 ALIGNMENT 970 YS2-13f18.q1k chr15 1137 41 971937 973049 C 1097 97.27 1390 reject_low 3 ALIGNMENT 111 YS2-13f18.p1k chr15 1178 943 704144 704393 C 236 85.59 1227 reject_low 39 ALIGNMENT 254 YS2-13f18.q1k chr10 1018 46 474184 475157 C 973 76.16 1390 reject_low 23 ALIGNMENT 0 YS2-13f18.p1k chr03 62 942 90440 90439 F 881 0.00 1227 reject_low 24 ALIGNMENT 985 YS2-13f18.q1k chr06 1137 41 139563 140675 C 1097 97.72 1390 reject_low 1 ALIGNMENT 114 YS2-13f18.p1k chr03 1178 943 168676 168925 C 236 86.02 1227 reject_low 29 ALIGNMENT 0 YS2-13f18.p1k chr10 942 62 204033 204032 C 881 0.00 1227 reject_low 36 ALIGNMENT 0 YS2-13f18.p1k chr15 942 62 710022 710021 C 881 0.00 1227 reject_low 4 ALIGNMENT 114 YS2-13f18.p1k chr16 943 1178 62392 62641 F 236 86.02 1227 reject_low 34 ALIGNMENT 0 YS2-13f18.p1k chr06 62 942 143538 143537 F 881 0.00 1227 reject_low 26 ALIGNMENT 0 YS2-13f18.p1k chr13 62 942 768550 768549 F 881 0.00 1227 reject_low 32 ALIGNMENT 981 YS2-13f18.q1k chr07 41 1137 571936 573049 F 1097 97.63 1390 reject_low 8 ALIGNMENT 0 YS2-13f18.p1k chr13 942 62 168679 168678 C 881 0.00 1227 reject_low 27 ALIGNMENT 0 YS2-13f18.p1k chr02 62 942 29644 29643 F 881 0.00 1227 reject_low 5 ALIGNMENT 0 YS2-13f18.p1k chr15 942 62 704394 704393 C 881 0.00 1227 reject_low 39 ALIGNMENT 117 YS2-13f18.p1k chr06 943 1178 137911 138160 F 236 86.44 1227 reject_low 1 ALIGNMENT 86 YS2-13f18.p1k chr01 1103 943 165992 166160 C 161 87.58 1227 reject_low 14 ALIGNMENT 979 YS2-13f18.q1k chr12 1137 41 942844 943956 C 1097 97.54 1390 reject_low 9 ALIGNMENT 114 YS2-13f18.p1k chr10 1178 943 541089 541338 C 236 86.02 1227 reject_low 31 ALIGNMENT 0 YS2-13f18.p1k chr01 942 62 160573 160572 C 881 0.00 1227 reject_low 46 ALIGNMENT 114 YS2-13f18.p1k chr14 1178 943 562113 562362 C 236 86.02 1227 reject_low 33 ALIGNMENT 114 YS2-13f18.p1k chr04 943 1178 986795 987044 F 236 86.02 1227 reject_low 30 ALIGNMENT 86 YS2-13f18.p1k chr03 943 1103 82702 82870 F 161 87.58 1227 reject_low 47 ALIGNMENT 105 YS2-13f18.p1k chr07 1178 943 111257 111506 C 236 84.75 1227 reject_low 44 ALIGNMENT 117 YS2-13f18.p1k chr03 943 1178 84813 85062 F 236 86.44 1227 reject_low 2 ALIGNMENT 967 YS2-13f18.q1k chr02 1137 41 31296 32408 C 1097 97.17 1390 reject_low 5 ALIGNMENT 108 YS2-13f18.p1k chr14 943 1178 524733 524982 F 236 85.17 1227 reject_low 41 ALIGNMENT 0 YS2-13f18.p1k chr10 942 62 355089 355088 C 881 0.00 1227 reject_low 37 ALIGNMENT 0 YS2-13f18.p1k chr15 62 942 970285 970284 F 881 0.00 1227 reject_low 3 ALIGNMENT 982 YS2-13f18.q1k chr04 41 1137 516876 517988 F 1097 97.63 1390 reject_low 7 ALIGNMENT 108 YS2-13f18.p1k chr02 943 1178 29644 29893 F 236 85.17 1227 reject_low 5 ALIGNMENT 0 YS2-13f18.p1k chr03 62 942 84071 84070 F 881 0.00 1227 reject_low 45 ALIGNMENT 0 YS2-13f18.p1k chr04 62 942 986795 986794 F 881 0.00 1227 reject_low 30 ALIGNMENT 114 YS2-13f18.p1k chr13 943 1178 768550 768799 F 236 86.02 1227 reject_low 32 ALIGNMENT 257 YS2-13f18.q1k chr10 1018 46 479768 480741 C 973 76.26 1390 reject_low 20 ALIGNMENT 0 YS2-13f18.p1k chr10 942 62 541339 541338 C 881 0.00 1227 reject_low 31 ALIGNMENT 253 YS2-13f18.q1k chr01 46 1018 163383 164357 F 973 76.16 1390 reject_low 14 ALIGNMENT 254 YS2-13f18.q1k chr08 46 1018 546749 547722 F 973 76.16 1390 reject_low 22 ALIGNMENT 111 YS2-13f18.p1k chr15 943 1178 664817 665066 F 236 85.59 1227 reject_low 38 ALIGNMENT 117 YS2-13f18.p1k chr03 943 1178 90440 90689 F 236 86.44 1227 reject_low 24 ALIGNMENT 254 YS2-13f18.q1k chr04 46 1018 989860 990833 F 973 76.16 1390 reject_low 21 ALIGNMENT 920 YS2-13f19.q1k chr10 40 1099 342723 343798 F 1060 96.13 1351 accept 0 ALIGNMENT 969 YS2-13f19.p1k chr10 1165 32 346698 347837 C 1134 96.65 1210 accept 0 ALIGNMENT 964 YS2-13f20.q1k chr10 30 1182 505097 506262 F 1153 95.58 1382 accept 0 ALIGNMENT 1007 YS2-13f20.p1k chr10 1218 29 508513 509709 C 1190 95.97 1218 accept 0 ALIGNMENT 903 YS2-13f21.q1k chr08 39 1063 280622 281654 F 1025 96.78 1268 accept 0 ALIGNMENT 41 YS2-13f23.q1k vc_1 649 609 2472 2512 C 41 100.00 649 reject_low 3 ALIGNMENT 41 YS2-13f23.q1k vc_4 609 649 5831 5871 F 41 100.00 649 reject_low 6 ALIGNMENT 413 YS2-13f23.p1k chr12 173 606 609544 609977 F 434 98.85 618 reject_low 1 ALIGNMENT 0 YS2-13f23.q1k vc_1 608 62 2513 2512 C 547 0.00 649 reject_low 3 ALIGNMENT 0 YS2-13f23.q1k chr12 649 609 609425 609424 C 41 0.00 649 reject_low 2 ALIGNMENT 0 YS2-13f23.q1k vc_5 610 62 37 36 C 549 0.00 649 reject_low 9 ALIGNMENT 39 YS2-13f23.q1k vc_5 649 611 5025 5063 C 39 100.00 649 reject_low 7 ALIGNMENT 0 YS2-13f23.q1k vc_4 62 608 5831 5830 F 547 0.00 649 reject_low 6 ALIGNMENT 128 YS2-13f23.p1k chr12 26 172 609428 609573 F 147 97.28 618 accept 0 ALIGNMENT 0 YS2-13f23.q1k vc_7 62 611 13525 13524 F 550 0.00 649 reject_low 8 ALIGNMENT 0 YS2-13f23.q1k chr12 458 62 609574 609573 C 397 0.00 649 reject_low 2 ALIGNMENT 141 YS2-13f23.q1k chr12 608 459 609424 609573 C 150 99.33 649 reject_low 2 ALIGNMENT 0 YS2-13f23.p1k chr12 62 172 609544 609543 F 111 0.00 618 reject_low 1 ALIGNMENT 41 YS2-13f23.q1k vc_3 649 609 2472 2512 C 41 100.00 649 reject_low 5 ALIGNMENT 36 YS2-13f23.q1k vc_5 646 611 1 36 C 36 100.00 649 reject_low 9 ALIGNMENT 41 YS2-13f23.q1k vc_2 649 609 2105 2145 C 41 100.00 649 reject_low 4 ALIGNMENT 0 YS2-13f23.q1k vc_2 608 62 2146 2145 C 547 0.00 649 reject_low 4 ALIGNMENT 38 YS2-13f23.q1k vc_7 612 649 13525 13562 F 38 100.00 649 reject_low 8 ALIGNMENT 0 YS2-13f23.q1k vc_3 608 62 2513 2512 C 547 0.00 649 reject_low 5 ALIGNMENT 0 YS2-13f23.q1k chr12 649 459 609545 609544 C 191 0.00 649 accept 0 ALIGNMENT 406 YS2-13f23.q1k chr12 458 26 609544 609977 C 433 98.38 649 accept 0 ALIGNMENT 0 YS2-13f23.p1k chr12 173 618 609573 609572 F 446 0.00 618 accept 0 ALIGNMENT 0 YS2-13f23.q1k vc_5 610 62 5064 5063 C 549 0.00 649 reject_low 7 ALIGNMENT 174 YS2-13f24.p1k chr02 27 208 632462 632643 F 182 100.00 227 accept 1 ALIGNMENT 65 YS2-13f24.q1k vc_4 238 304 1548 1614 F 67 100.00 961 reject_vc 3 ALIGNMENT 111 YS2-13f24.q1k vc_7 421 305 4583 4699 C 117 98.29 961 reject_low 8 ALIGNMENT 51 YS2-13f24.q1k vc_7 54 3 6360 6411 C 52 100.00 961|1,0 reject_low 8 ALIGNMENT 302 YS2-13f24.q1k vc_2 1 303 2322 2624 F 303 100.00 961 reject_low 6 ALIGNMENT 656 YS2-13f24.q1k vc_5 1 922 2556 3466 F 922 91.76 961 reject_vc 0 ALIGNMENT 0 YS2-13f24.q1k vc_7 53 54 5172 6360 C 0 0.00 961 reject_low 8 ALIGNMENT 0 YS2-13f24.q1k vc_4 237 62 6340 6339 C 176 0.00 961 reject_low 10 ALIGNMENT 409 YS2-13f24.q1k vc_4 421 1 5232 5654 C 421 99.05 961 reject_low 4 ALIGNMENT 0 YS2-13f24.q1k vc_2 304 413 2624 2623 F 110 0.00 961 reject_low 6 ALIGNMENT 65 YS2-13f24.q1k vc_4 304 238 46 112 C 67 100.00 961 reject_low 9 ALIGNMENT 0 YS2-13f24.p1k chr02 209 227 632643 632642 F 19 0.00 227 accept 1 ALIGNMENT 0 YS2-13f24.q1k vc_3 304 413 2991 2990 F 110 0.00 961 reject_low 7 ALIGNMENT 65 YS2-13f24.q1k vc_4 304 238 6273 6339 C 67 100.00 961 reject_low 10 ALIGNMENT 344 YS2-13f24.q1k vc_4 308 922 1879 2482 F 615 87.48 961 reject_vc 3 ALIGNMENT 0 YS2-13f24.q1k vc_4 413 305 6274 6273 C 109 0.00 961 reject_low 10 ALIGNMENT 0 YS2-13f24.q1k vc_7 304 304 4700 4921 C 1 0.00 961 reject_low 8 ALIGNMENT 635 YS2-13f24.q1k vc_7 762 1 1817 2569 C 762 95.41 961 reject_vc 2 ALIGNMENT 302 YS2-13f24.q1k vc_3 1 303 2689 2991 F 303 100.00 961 reject_low 7 ALIGNMENT 0 YS2-13f24.q1k vc_4 413 305 47 46 C 109 0.00 961 reject_low 9 ALIGNMENT 0 YS2-13f24.q1k vc_4 305 307 1615 1878 F 3 0.00 961 reject_vc 3 ALIGNMENT 0 YS2-13f24.q1k vc_4 237 62 113 112 C 176 0.00 961 reject_low 9 ALIGNMENT 302 YS2-13f24.q1k vc_1 1 303 2689 2991 F 303 100.00 961 reject_low 5 ALIGNMENT 0 YS2-13f24.q1k vc_1 304 413 2991 2990 F 110 0.00 961 reject_low 5 ALIGNMENT 247 YS2-13f24.q1k vc_7 303 53 4922 5172 C 251 99.60 961|0,1 reject_low 8 ALIGNMENT 0 YS2-13f24.q1k vc_4 62 237 1548 1547 F 176 0.00 961 reject_vc 3 ALIGNMENT 0 YS2-13g02.q1k chr12 62 591 451419 451418 F 530 0.00 1404 reject_low 1 ALIGNMENT 863 YS2-13g02.q1k chr12 36 1282 459972 461265 F 1247 91.58 1404 accept 0 ALIGNMENT 32 YS2-13g02.q1k chr12 40 79 459977 460016 F 40 100.00 1404 reject_low 3 ALIGNMENT 942 YS2-13g02.p1k chr12 1104 30 454593 455684 C 1075 96.74 1170 reject_low 1 ALIGNMENT 942 YS2-13g02.p1k chr12 1104 30 463730 464821 C 1075 96.74 1170 accept 0 ALIGNMENT 451 YS2-13g02.q1k chr12 592 1282 451419 452128 F 691 90.45 1404 reject_low 1 ALIGNMENT 0 YS2-13g02.q1k chr12 62 946 489754 489753 F 885 0.00 1404 reject_low 2 ALIGNMENT 0 YS2-13g02.q1k chr12 80 837 460016 460015 F 758 0.00 1404 reject_low 3 ALIGNMENT 181 YS2-13g02.q1k chr12 947 1282 489754 490096 F 336 85.71 1404 reject_low 2 ALIGNMENT 42 YS2-13g04.q1k vc_4 328 369 5830 5871 F 42 100.00 369 reject_low 5 ALIGNMENT 42 YS2-13g04.q1k vc_3 369 328 2472 2513 C 42 100.00 369 reject_low 4 ALIGNMENT 42 YS2-13g04.q1k vc_2 369 328 2105 2146 C 42 100.00 369 reject_low 3 ALIGNMENT 0 YS2-13g04.q1k vc_5 330 62 5064 5063 C 269 0.00 369 reject_low 6 ALIGNMENT 0 YS2-13g04.q1k vc_1 327 62 2514 2513 C 266 0.00 369 reject_low 2 ALIGNMENT 0 YS2-13g04.q1k vc_3 327 62 2514 2513 C 266 0.00 369 reject_low 4 ALIGNMENT 36 YS2-13g04.q1k vc_5 366 331 1 36 C 36 100.00 369 reject_low 8 ALIGNMENT 0 YS2-13g04.q1k vc_4 62 327 5830 5829 F 266 0.00 369 reject_low 5 ALIGNMENT 0 YS2-13g04.q1k chr11 369 329 48247 48246 C 41 0.00 369 accept_chi 1 ALIGNMENT 275 YS2-13g04.p1k chr11 29 317 48246 48534 F 289 98.62 335 accept_chi 0 ALIGNMENT 0 YS2-13g04.p1k chr11 318 335 48534 48533 F 18 0.00 335 accept_chi 0 ALIGNMENT 42 YS2-13g04.q1k vc_1 369 328 2472 2513 C 42 100.00 369 reject_low 2 ALIGNMENT 38 YS2-13g04.q1k vc_7 332 369 13525 13562 F 38 100.00 369 reject_low 7 ALIGNMENT 0 YS2-13g04.q1k vc_7 62 331 13525 13524 F 270 0.00 369 reject_low 7 ALIGNMENT 39 YS2-13g04.q1k vc_5 369 331 5025 5063 C 39 100.00 369 reject_low 6 ALIGNMENT 0 YS2-13g04.q1k vc_5 330 62 37 36 C 269 0.00 369 reject_low 8 ALIGNMENT 0 YS2-13g04.q1k vc_2 327 62 2147 2146 C 266 0.00 369 reject_low 3 ALIGNMENT 275 YS2-13g04.q1k chr11 328 40 48246 48534 C 289 98.62 369 accept_chi 1 ALIGNMENT 1054 YS2-13g05.q1k chr13 38 1250 611889 613110 F 1213 96.54 1385 accept 0 ALIGNMENT 962 YS2-13g05.p1k chr13 1181 30 612092 613227 C 1152 96.61 1181 accept 0 ALIGNMENT 0 YS2-13g07.q1k chr02 930 915 606654 606653 C 16 0.00 1370 reject_low 1 ALIGNMENT 1000 YS2-13g07.q1k chr16 1230 31 406726 407938 C 1200 94.83 1370 accept 0 ALIGNMENT 977 YS2-13g07.p1k chr16 48 1159 402732 403856 F 1112 97.03 1173 accept 0 ALIGNMENT 0 YS2-13g07.q1k chr02 425 62 607142 607141 C 364 0.00 1370 reject_low 1 ALIGNMENT 382 YS2-13g07.q1k chr02 914 426 606653 607141 C 489 92.84 1370 reject_low 1 ALIGNMENT 787 YS2-13g08.p1k chr12 1115 33 467646 468698 C 1083 93.91 1238 accept 1 ALIGNMENT 0 YS2-13g08.p1k chr06 62 178 31622 31621 F 117 0.00 1238 reject_low 2 ALIGNMENT 990 YS2-13g08.q1k chr12 41 1191 455803 456968 F 1151 95.48 1417 accept 0 ALIGNMENT 787 YS2-13g08.p1k chr12 1115 33 458509 459561 C 1083 93.91 1238 accept 0 ALIGNMENT 0 YS2-13g08.p1k chr06 287 844 31729 31728 F 558 0.00 1238 reject_low 2 ALIGNMENT 990 YS2-13g08.q1k chr12 41 1191 464940 466105 F 1151 95.48 1417 accept 1 ALIGNMENT 94 YS2-13g08.p1k chr06 179 286 31622 31729 F 108 98.15 1238 reject_low 2 ALIGNMENT 1003 YS2-13g09.p1k chr01 1237 64 8156 9335 C 1174 96.51 1241 accept 0 ALIGNMENT 815 YS2-13g09.q1k chr01 40 1166 4436 5568 F 1127 93.35 1345 accept 0 ALIGNMENT 130 YS2-13g10.p1k chr11 28 183 141501 141657 F 156 98.72 202 accept 0 ALIGNMENT 0 YS2-13g10.p1k chr11 184 202 141657 141656 F 19 0.00 202 accept 0 ALIGNMENT 987 YS2-13g11.q1k chr12 38 1141 429023 430136 F 1104 97.46 1340 accept 0 ALIGNMENT 1013 YS2-13g11.p1k chr12 1214 64 430089 431244 C 1151 97.13 1223 accept 0 ALIGNMENT 835 YS2-13g12.q1k chr14 42 1018 315123 316102 F 977 96.32 1266 accept 0 ALIGNMENT 908 YS2-13g12.p1k chr14 1159 35 319415 320547 C 1125 94.93 1287 accept 0 ALIGNMENT 36 YS2-13g14.q1k vc_5 271 236 1 36 C 36 100.00 274 reject_low 8 ALIGNMENT 0 YS2-13g14.q1k vc_3 233 62 2513 2512 C 172 0.00 274 reject_low 4 ALIGNMENT 191 YS2-13g14.p1k chr04 224 29 523154 523349 C 196 100.00 242 accept_chi 0 ALIGNMENT 0 YS2-13g14.q1k chr04 234 274 523349 523348 F 41 0.00 274 accept_chi 1 ALIGNMENT 41 YS2-13g14.q1k vc_1 274 234 2472 2512 C 41 100.00 274 reject_low 2 ALIGNMENT 0 YS2-13g14.q1k vc_1 233 62 2513 2512 C 172 0.00 274 reject_low 2 ALIGNMENT 41 YS2-13g14.q1k vc_3 274 234 2472 2512 C 41 100.00 274 reject_low 4 ALIGNMENT 186 YS2-13g14.q1k chr04 39 233 523154 523349 F 195 99.49 274 accept_chi 1 ALIGNMENT 0 YS2-13g14.q1k vc_5 235 62 5064 5063 C 174 0.00 274 reject_low 6 ALIGNMENT 41 YS2-13g14.q1k vc_2 274 234 2105 2145 C 41 100.00 274 reject_low 3 ALIGNMENT 0 YS2-13g14.q1k vc_2 233 62 2146 2145 C 172 0.00 274 reject_low 3 ALIGNMENT 0 YS2-13g14.p1k chr04 242 225 523155 523154 C 18 0.00 242 accept_chi 0 ALIGNMENT 39 YS2-13g14.q1k vc_5 274 236 5025 5063 C 39 100.00 274 reject_low 6 ALIGNMENT 38 YS2-13g14.q1k vc_7 237 274 13525 13562 F 38 100.00 274 reject_low 7 ALIGNMENT 0 YS2-13g14.q1k vc_4 62 233 5831 5830 F 172 0.00 274 reject_low 5 ALIGNMENT 0 YS2-13g14.q1k vc_7 62 236 13525 13524 F 175 0.00 274 reject_low 7 ALIGNMENT 0 YS2-13g14.q1k vc_5 235 62 37 36 C 174 0.00 274 reject_low 8 ALIGNMENT 41 YS2-13g14.q1k vc_4 234 274 5831 5871 F 41 100.00 274 reject_low 5 ALIGNMENT 790 YS2-13g15.p1k chr08 30 994 251765 252745 F 965 94.40 1106 accept 0 ALIGNMENT 926 YS2-13g15.q1k chr08 1087 32 256583 257643 C 1056 97.16 1337 accept 0 ALIGNMENT 521 YS2-13g16.q1k chr04 574 38 942998 943534 C 537 100.00 1445 accept 0 ALIGNMENT 0 YS2-13g16.q1k chr04 911 575 942999 942998 C 337 0.00 1445 accept 0 ALIGNMENT 1002 YS2-13g17.p1k chr05 30 1187 366486 367640 F 1158 96.55 1205 accept 0 ALIGNMENT 946 YS2-13g17.q1k chr05 1116 40 369473 370549 C 1077 96.47 1368 accept 0 ALIGNMENT 1038 YS2-13g18.p1k chr15 30 1188 1029235 1030395 F 1159 96.64 1267 accept 0 ALIGNMENT 936 YS2-13g18.q1k chr15 1127 40 1033003 1034104 C 1088 96.05 1374 accept 0 ALIGNMENT 63 YS2-13g19.q1k chr07 324 154 895 1078 C 171 81.29 778 ambiguous_tel 0 ALIGNMENT 0 YS2-13g19.q1k chr08 207 778 8046 8045 F 572 0.00 778 reject_low 17 ALIGNMENT 0 YS2-13g19.p1k chr03 107 455 291983 291982 F 349 0.00 735 reject_low 27,29 ALIGNMENT 0 YS2-13g19.p1k chr02 294 735 6660 6659 F 442 0.00 735 reject_low 19 ALIGNMENT 0 YS2-13g19.p1k chr07 442 442 905 894 F 1 0.00 735 reject_low 26 ALIGNMENT 0 YS2-13g19.p1k chr11 107 431 665111 665110 F 325 0.00 735 reject_low 8 ALIGNMENT 0 YS2-13g19.p1k chr05 399 107 566946 566945 C 293 0.00 735 ambiguous_tel 1 reject_low 18 ALIGNMENT 42 YS2-13g19.q1k vc_3 778 737 2472 2513 C 42 100.00 778 reject_low 6 ALIGNMENT 23 YS2-13g19.p1k chr08 550 521 8046 8075 C 30 96.67 735 reject_low 17,28 ALIGNMENT 0 YS2-13g19.q1k chr03 249 110 292048 292047 C 140 0.00 778 reject_low 23 ALIGNMENT 0 YS2-13g19.q1k vc_7 110 740 63 62 F 631 0.00 778 reject_low 14 ALIGNMENT 0 YS2-13g19.p1k chr03 518 520 292048 292060 F 3 0.00 735 reject_low 29 ALIGNMENT 0 YS2-13g19.p1k chr07 442 735 904 903 F 294 0.00 735 ambiguous_tel 0 ALIGNMENT 36 YS2-13g19.q1k vc_5 775 740 1 36 C 36 100.00 778 reject_low 16 ALIGNMENT 44 YS2-13g19.p1k chr05 529 612 568934 569017 F 84 85.71 735 reject_low 21 ALIGNMENT 63 YS2-13g19.p1k chr07 443 613 895 1078 F 171 81.29 735 reject_low 26 ALIGNMENT 0 YS2-13g19.p1k chr02 107 268 6636 6635 F 162 0.00 735 reject_low 19 ALIGNMENT 0 YS2-13g19.q1k chr02 778 499 6637 6636 C 280 0.00 778 reject_low 20 ALIGNMENT 84 YS2-13g19.q1k chr05 154 330 566696 566886 F 177 84.18 778 ambiguous_tel 1 ALIGNMENT 69 YS2-13g19.p1k chr11 432 613 665111 665305 F 182 80.77 735 reject_low 8 ALIGNMENT 0 YS2-13g19.p1k chr03 573 581 292113 292130 F 9 0.00 735 reject_low 29 ALIGNMENT 26 YS2-13g19.p1k chr07 399 441 862 904 F 43 88.37 735 ambiguous_tel 0 reject_low 26 ALIGNMENT 0 YS2-13g19.q1k chr15 110 473 1083865 1083864 F 364 0.00 778 reject_low 3 ALIGNMENT 39 YS2-13g19.q1k vc_5 778 740 5025 5063 C 39 100.00 778 reject_low 13 ALIGNMENT 0 YS2-13g19.p1k chr05 613 735 569017 569016 F 123 0.00 735 reject_low 21 ALIGNMENT 0 YS2-13g19.q1k chr03 194 186 292113 292130 C 9 0.00 778 reject_low 27 ALIGNMENT 0 YS2-13g19.q1k chr11 153 110 665306 665305 C 44 0.00 778 reject_low 9 ALIGNMENT 33 YS2-13g19.q1k chr15 474 554 1083865 1083945 F 81 82.72 778 reject_low 3 ALIGNMENT 28 YS2-13g19.p1k chr03 582 613 292131 292162 F 32 96.88 735 reject_low 29 ALIGNMENT 0 YS2-13g19.q1k vc_5 739 110 5064 5063 C 630 0.00 778 reject_low 13 ALIGNMENT 0 YS2-13g19.q1k chr15 555 778 1083945 1083944 F 224 0.00 778 reject_low 3 ALIGNMENT 0 YS2-13g19.q1k chr07 778 325 896 895 C 454 0.00 778 ambiguous_tel 0 ALIGNMENT 26 YS2-13g19.q1k chr03 311 250 291983 292047 C 62 82.26 778 reject_low 23 ALIGNMENT 0 YS2-13g19.p1k chr11 614 735 665305 665304 F 122 0.00 735 reject_low 8 ALIGNMENT 0 YS2-13g19.q1k chr02 473 110 6661 6660 C 364 0.00 778 reject_low 20 ALIGNMENT 84 YS2-13g19.p1k chr05 613 437 566696 566886 C 177 84.18 735 reject_low 18 ALIGNMENT 0 YS2-13g19.q1k chr05 110 331 566910 566909 F 222 0.00 778 reject_low 10 ALIGNMENT 0 YS2-13g19.q1k chr07 153 110 1079 1078 C 44 0.00 778 ambiguous_tel 0 ALIGNMENT 26 YS2-13g19.q1k chr05 332 367 566910 566945 F 36 91.67 778 reject_low 10 ALIGNMENT 0 YS2-13g19.p1k chr03 614 735 4321 4320 F 122 0.00 735 reject_low 11 ALIGNMENT 0 YS2-13g19.p1k chr03 614 735 292162 292161 F 122 0.00 735 reject_low 29 ALIGNMENT 0 YS2-13g19.q1k chr05 110 153 566696 566695 F 44 0.00 778 ambiguous_tel 1 ALIGNMENT 0 YS2-13g19.p1k chr07 107 225 767 766 F 119 0.00 735 ambiguous_tel 0 reject_low 26 ALIGNMENT 26 YS2-13g19.p1k chr03 456 517 291983 292047 F 62 82.26 735 reject_low 27,29 ALIGNMENT 0 YS2-13g19.p1k chr08 520 107 8076 8075 C 414 0.00 735 reject_low 17,28 ALIGNMENT 0 YS2-13g19.q1k vc_1 736 110 2514 2513 C 627 0.00 778 reject_low 4 ALIGNMENT 69 YS2-13g19.q1k chr11 335 154 665111 665305 C 182 80.77 778 reject_low 9 ALIGNMENT 0 YS2-13g19.q1k chr03 778 331 4133 4132 C 448 0.00 778 reject_low 12 ALIGNMENT 22 YS2-13g19.p1k chr02 269 293 6636 6660 F 25 100.00 735 reject_low 19 ALIGNMENT 0 YS2-13g19.q1k vc_7 110 740 13525 13524 F 631 0.00 778 reject_low 15 ALIGNMENT 29 YS2-13g19.p1k chr07 226 294 767 835 F 69 82.61 735 ambiguous_tel 0 reject_low 26 ALIGNMENT 69 YS2-13g19.p1k chr03 437 613 4132 4321 F 177 81.36 735 reject_low 11 ALIGNMENT 0 YS2-13g19.p1k chr15 735 294 1083866 1083865 C 442 0.00 735 reject_low 2 ALIGNMENT 0 YS2-13g19.q1k chr05 154 110 569018 569017 C 45 0.00 778 reject_low 22 ALIGNMENT 28 YS2-13g19.q1k chr03 185 154 292131 292162 C 32 96.88 778 reject_low 27 ALIGNMENT 0 YS2-13g19.q1k chr03 153 110 4322 4321 C 44 0.00 778 reject_low 12 ALIGNMENT 0 YS2-13g19.p1k chr08 735 614 7995 7994 C 122 0.00 735 reject_low 28 ALIGNMENT 0 YS2-13g19.q1k chr03 778 312 291984 291983 C 467 0.00 778 reject_low 23 ALIGNMENT 69 YS2-13g19.q1k chr03 330 154 4132 4321 C 177 81.36 778 reject_low 12 ALIGNMENT 45 YS2-13g19.q1k chr03 246 195 292061 292112 C 52 98.08 778 reject_low 27 ALIGNMENT 26 YS2-13g19.p1k chr05 435 400 566910 566945 C 36 91.67 735 ambiguous_tel 1 reject_low 18 ALIGNMENT 0 YS2-13g19.p1k chr15 212 107 1083946 1083945 C 106 0.00 735 reject_low 2 ALIGNMENT 0 YS2-13g19.q1k chr11 778 336 665112 665111 C 443 0.00 778 reject_low 9 ALIGNMENT 0 YS2-13g19.p1k chr08 735 551 8047 8046 C 185 0.00 735 reject_low 17 ALIGNMENT 29 YS2-13g19.q1k chr07 541 473 767 835 C 69 82.61 778 reject_low 24 ALIGNMENT 0 YS2-13g19.p1k chr05 107 528 568934 568933 F 422 0.00 735 reject_low 21 ALIGNMENT 38 YS2-13g19.q1k chr08 154 206 7994 8046 F 53 92.45 778 reject_low 17 ALIGNMENT 23 YS2-13g19.q1k chr08 217 246 8046 8075 F 30 96.67 778 reject_low 25 ALIGNMENT 0 YS2-13g19.p1k chr07 295 398 836 861 F 104 0.00 735 ambiguous_tel 0 reject_low 26 ALIGNMENT 38 YS2-13g19.q1k vc_7 741 778 63 100 F 38 100.00 778 reject_low 14 ALIGNMENT 0 YS2-13g19.q1k vc_4 110 736 5830 5829 F 627 0.00 778 reject_low 7 ALIGNMENT 0 YS2-13g19.q1k chr05 331 778 566886 566885 F 448 0.00 778 ambiguous_tel 1 ALIGNMENT 0 YS2-13g19.q1k chr07 778 542 768 767 C 237 0.00 778 reject_low 24 ALIGNMENT 0 YS2-13g19.p1k chr05 735 436 566911 566910 C 300 0.00 735 ambiguous_tel 1 ALIGNMENT 0 YS2-13g19.q1k chr05 368 778 566945 566944 F 411 0.00 778 reject_low 10 ALIGNMENT 0 YS2-13g19.q1k chr08 110 153 7994 7993 F 44 0.00 778 reject_low 17 ALIGNMENT 44 YS2-13g19.q1k chr05 238 155 568934 569017 C 84 85.71 778 reject_low 22 ALIGNMENT 0 YS2-13g19.q1k chr03 153 110 292163 292162 C 44 0.00 778 reject_low 27 ALIGNMENT 0 YS2-13g19.q1k chr08 247 778 8075 8074 F 532 0.00 778 reject_low 25 ALIGNMENT 0 YS2-13g19.q1k vc_3 736 110 2514 2513 C 627 0.00 778 reject_low 6 ALIGNMENT 0 YS2-13g19.p1k chr07 614 735 1078 1077 F 122 0.00 735 reject_low 26 ALIGNMENT 0 YS2-13g19.q1k chr05 778 239 568935 568934 C 540 0.00 778 reject_low 22 ALIGNMENT 42 YS2-13g19.q1k vc_1 778 737 2472 2513 C 42 100.00 778 reject_low 4 ALIGNMENT 0 YS2-13g19.q1k chr03 778 247 292062 292061 C 532 0.00 778 reject_low 27 ALIGNMENT 0 YS2-13g19.q1k vc_2 736 110 2147 2146 C 627 0.00 778 reject_low 5 ALIGNMENT 0 YS2-13g19.p1k chr03 518 735 292047 292046 F 218 0.00 735 reject_low 27 ALIGNMENT 42 YS2-13g19.q1k vc_2 778 737 2105 2146 C 42 100.00 778 reject_low 5 ALIGNMENT 0 YS2-13g19.q1k chr07 325 110 905 904 C 216 0.00 778 reject_low 24 ALIGNMENT 33 YS2-13g19.p1k chr15 293 213 1083865 1083945 C 81 82.72 735 reject_low 2 ALIGNMENT 0 YS2-13g19.q1k chr07 472 369 836 861 C 104 0.00 778 reject_low 24 ALIGNMENT 0 YS2-13g19.p1k chr05 735 614 566697 566696 C 122 0.00 735 reject_low 18 ALIGNMENT 22 YS2-13g19.q1k chr02 498 474 6636 6660 C 25 100.00 778 reject_low 20 ALIGNMENT 0 YS2-13g19.p1k chr08 560 551 8047 8045 C 10 0.00 735 reject_low 28 ALIGNMENT 42 YS2-13g19.q1k vc_4 737 778 5830 5871 F 42 100.00 778 reject_low 7 ALIGNMENT 38 YS2-13g19.p1k chr08 613 561 7994 8046 C 53 92.45 735 reject_low 28 ALIGNMENT 38 YS2-13g19.q1k vc_7 741 778 13525 13562 F 38 100.00 778 reject_low 15 ALIGNMENT 26 YS2-13g19.q1k chr07 368 326 862 904 C 43 88.37 778 reject_low 24 ALIGNMENT 0 YS2-13g19.p1k chr03 107 436 4132 4131 F 330 0.00 735 reject_low 11 ALIGNMENT 0 YS2-13g19.q1k vc_5 739 110 37 36 C 630 0.00 778 reject_low 16 ALIGNMENT 45 YS2-13g19.p1k chr03 521 572 292061 292112 F 52 98.08 735 reject_low 29 ALIGNMENT 0 YS2-13g19.q1k chr08 110 216 8046 8045 F 107 0.00 778 reject_low 25 ALIGNMENT 0 YS2-13g19.p1k chr05 436 436 566887 566909 C 1 0.00 735 reject_low 18 ALIGNMENT 0 YS2-13g21.q1k chr09 230 500 98750 99139 F 271 0.00 1073 reject_bad_break 0 ALIGNMENT 91 YS2-13g21.q1k chr14 50 218 493996 494166 F 169 85.21 1073 reject_low 1 ALIGNMENT 254 YS2-13g21.q1k chr09 501 938 99140 99592 F 438 86.07 1073 reject_bad_break 0 ALIGNMENT 0 YS2-13g21.q1k chr14 219 648 494166 494165 F 430 0.00 1073 reject_low 1 ALIGNMENT 940 YS2-13g21.p1k chr09 1172 55 102122 103239 C 1118 96.06 1178 reject_bad_break 0 ALIGNMENT 154 YS2-13g21.q1k chr09 50 229 98566 98749 F 180 96.11 1073 reject_bad_break 0 ALIGNMENT 686 YS2-13g22.p1k chr11 57 1015 205468 206401 F 959 93.12 1332 accept 0 ALIGNMENT 352 YS2-13g23.p1k chr04 458 62 535237 535633 C 397 96.47 1189 reject_low 1 ALIGNMENT 899 YS2-13g23.p1k chr04 1038 62 526889 527863 C 977 98.06 1189 accept 0 ALIGNMENT 0 YS2-13g23.p1k chr04 914 459 535238 535237 C 456 0.00 1189 reject_low 1 ALIGNMENT 349 YS2-13g23.p1k chr04 458 62 531352 531748 C 397 96.22 1189 reject_low 2 ALIGNMENT 0 YS2-13g23.p1k chr04 914 459 531353 531352 C 456 0.00 1189 reject_low 2 ALIGNMENT 1007 YS2-13g24.p1k chr11 29 1189 205464 206617 F 1161 96.21 1208 accept 0 ALIGNMENT 1013 YS2-13g24.q1k chr11 1156 33 209538 210666 C 1124 97.51 1354 accept 0 ALIGNMENT 909 YS2-13h01.p1k chr05 1105 33 372862 373920 C 1073 95.90 1222 accept 0 ALIGNMENT 1040 YS2-13h01.q1k chr05 35 1229 368509 369713 F 1195 96.40 1389 accept 0 ALIGNMENT 0 YS2-13h02.q1k chr04 180 217 1025962 1025961 F 38 0.00 217 accept 0 ALIGNMENT 37 YS2-13h02.q1k vc_5 214 175 1 40 C 40 97.50 217 reject_low 7 ALIGNMENT 136 YS2-13h02.q1k chr04 36 179 1025818 1025962 F 144 99.31 217 accept 0 ALIGNMENT 41 YS2-13h02.q1k vc_2 217 177 2105 2145 C 41 100.00 217 reject_low 2 ALIGNMENT 41 YS2-13h02.q1k vc_3 217 177 2472 2512 C 41 100.00 217 reject_low 3 ALIGNMENT 0 YS2-13h02.q1k vc_2 176 62 2146 2145 C 115 0.00 217 reject_low 2 ALIGNMENT 41 YS2-13h02.q1k vc_4 177 217 5831 5871 F 41 100.00 217 reject_low 4 ALIGNMENT 0 YS2-13h02.q1k vc_5 174 62 41 40 C 113 0.00 217 reject_low 7 ALIGNMENT 0 YS2-13h02.q1k vc_7 62 179 13525 13524 F 118 0.00 217 reject_low 6 ALIGNMENT 0 YS2-13h02.q1k vc_3 176 62 2513 2512 C 115 0.00 217 reject_low 3 ALIGNMENT 41 YS2-13h02.q1k vc_1 217 177 2472 2512 C 41 100.00 217 reject_low 1 ALIGNMENT 38 YS2-13h02.q1k vc_7 180 217 13525 13562 F 38 100.00 217 reject_low 6 ALIGNMENT 0 YS2-13h02.q1k vc_4 62 176 5831 5830 F 115 0.00 217 reject_low 4 ALIGNMENT 0 YS2-13h02.q1k vc_1 176 62 2513 2512 C 115 0.00 217 reject_low 1 ALIGNMENT 40 YS2-13h02.q1k vc_5 217 175 5025 5067 C 43 97.67 217 reject_low 5 ALIGNMENT 0 YS2-13h02.q1k vc_5 174 62 5068 5067 C 113 0.00 217 reject_low 5 ALIGNMENT 722 YS2-13h03.p1k chr12 1065 31 467074 468088 C 1035 92.85 1205 accept 1 ALIGNMENT 1032 YS2-13h03.q1k chr12 31 1198 454180 455349 F 1168 95.98 1436 accept 0 ALIGNMENT 722 YS2-13h03.p1k chr12 1065 31 457937 458951 C 1035 92.85 1205 accept 0 ALIGNMENT 1032 YS2-13h03.q1k chr12 31 1198 463317 464486 F 1168 95.98 1436 accept 1 ALIGNMENT 961 YS2-13h04.p1k chr08 1165 29 60143 61283 C 1137 95.60 1271 accept 0 ALIGNMENT 933 YS2-13h04.q1k chr08 37 1086 56686 57747 F 1050 97.14 1395 accept 0 ALIGNMENT 897 YS2-13h05.q1k chr15 43 1019 461815 462796 F 977 97.54 1266 accept 0 ALIGNMENT 20 YS2-13h05.q1k chrm 496 434 60302 60362 C 63 87.30 1266 reject_low 1 ALIGNMENT 0 YS2-13h05.q1k chrm 828 497 60303 60302 C 332 0.00 1266 reject_low 1 ALIGNMENT 0 YS2-13h05.q1k chrm 433 62 60363 60362 C 372 0.00 1266 reject_low 1 ALIGNMENT 960 YS2-13h06.p1k chr09 1130 28 223166 224279 C 1103 96.28 1218 accept 0 ALIGNMENT 1017 YS2-13h06.q1k chr09 37 1206 219998 221170 F 1170 96.15 1461 accept 0 ALIGNMENT 954 YS2-13h08.p1k chr16 37 1165 629090 630233 F 1129 95.66 1240 accept 0 ALIGNMENT 1004 YS2-13h08.q1k chr16 1202 39 632490 633661 C 1164 96.65 1453 accept 0 ALIGNMENT 0 YS2-13h09.q1k vc_1 227 62 2513 2512 C 166 0.00 268 reject_low 2 ALIGNMENT 0 YS2-13h09.q1k vc_7 62 230 63 62 F 169 0.00 268 reject_low 7 ALIGNMENT 0 YS2-13h09.q1k vc_5 229 62 37 36 C 168 0.00 268 reject_low 9 ALIGNMENT 41 YS2-13h09.q1k vc_3 268 228 2472 2512 C 41 100.00 268 reject_low 4 ALIGNMENT 39 YS2-13h09.q1k vc_5 268 230 5025 5063 C 39 100.00 268 reject_low 6 ALIGNMENT 0 YS2-13h09.p1k chr14 219 237 291948 291947 F 19 0.00 237 accept_chi 1 ALIGNMENT 41 YS2-13h09.q1k vc_2 268 228 2105 2145 C 41 100.00 268 reject_low 3 ALIGNMENT 0 YS2-13h09.q1k vc_3 227 62 2513 2512 C 166 0.00 268 reject_low 4 ALIGNMENT 41 YS2-13h09.q1k vc_1 268 228 2472 2512 C 41 100.00 268 reject_low 2 ALIGNMENT 173 YS2-13h09.q1k chr14 228 40 291760 291948 C 189 99.47 268 accept_chi 0 ALIGNMENT 38 YS2-13h09.q1k vc_7 231 268 13525 13562 F 38 100.00 268 reject_low 8 ALIGNMENT 0 YS2-13h09.q1k vc_7 62 230 13525 13524 F 169 0.00 268 reject_low 8 ALIGNMENT 36 YS2-13h09.q1k vc_5 265 230 1 36 C 36 100.00 268 reject_low 9 ALIGNMENT 0 YS2-13h09.q1k vc_5 229 62 5064 5063 C 168 0.00 268 reject_low 6 ALIGNMENT 38 YS2-13h09.q1k vc_7 231 268 63 100 F 38 100.00 268 reject_low 7 ALIGNMENT 171 YS2-13h09.p1k chr14 30 218 291760 291948 F 189 99.47 237 accept_chi 1 ALIGNMENT 0 YS2-13h09.q1k chr14 268 229 291761 291760 C 40 0.00 268 accept_chi 0 ALIGNMENT 0 YS2-13h09.q1k vc_2 227 62 2146 2145 C 166 0.00 268 reject_low 3 ALIGNMENT 0 YS2-13h09.q1k vc_4 62 227 5831 5830 F 166 0.00 268 reject_low 5 ALIGNMENT 41 YS2-13h09.q1k vc_4 228 268 5831 5871 F 41 100.00 268 reject_low 5 ALIGNMENT 990 YS2-13h10.p1k chr07 1144 29 516039 517175 C 1116 96.95 1252 accept 0 ALIGNMENT 913 YS2-13h10.q1k chr07 47 1074 512910 513943 F 1028 96.89 1386 accept 0 ALIGNMENT 863 YS2-13h12.p1k chr11 32 1038 446315 447337 F 1007 96.82 1223 accept 0 ALIGNMENT 978 YS2-13h12.q1k chr11 1119 29 449860 450952 C 1091 96.88 1416 accept 0 ALIGNMENT 1023 YS2-13h13.p1k chr15 30 1247 726589 727816 F 1218 96.39 1250 accept 0 ALIGNMENT 1011 YS2-13h13.q1k chr15 1193 35 731338 732502 C 1159 96.98 1401 accept 0 ALIGNMENT 40 YS2-13h14.q1k vc_2 697 658 2105 2144 C 40 100.00 697 reject_low 3 ALIGNMENT 39 YS2-13h14.q1k vc_5 697 659 5025 5063 C 39 100.00 697 reject_low 6 ALIGNMENT 592 YS2-13h14.p1k chr12 644 26 1046015 1046633 C 619 99.68 663 accept_chi 0 ALIGNMENT 38 YS2-13h14.q1k vc_7 660 697 63 100 F 38 100.00 697 reject_low 7 ALIGNMENT 0 YS2-13h14.q1k vc_4 62 657 5832 5831 F 596 0.00 697 reject_low 5 ALIGNMENT 0 YS2-13h14.q1k chr12 658 697 1046633 1046632 F 40 0.00 697 accept_chi 1 ALIGNMENT 38 YS2-13h14.q1k vc_7 660 697 13525 13562 F 38 100.00 697 reject_low 8 ALIGNMENT 0 YS2-13h14.q1k vc_7 62 659 13525 13524 F 598 0.00 697 reject_low 8 ALIGNMENT 0 YS2-13h14.p1k chr12 663 645 1046016 1046015 C 19 0.00 663 accept_chi 0 ALIGNMENT 0 YS2-13h14.q1k vc_2 657 62 2145 2144 C 596 0.00 697 reject_low 3 ALIGNMENT 0 YS2-13h14.q1k vc_1 657 62 2512 2511 C 596 0.00 697 reject_low 2 ALIGNMENT 40 YS2-13h14.q1k vc_1 697 658 2472 2511 C 40 100.00 697 reject_low 2 ALIGNMENT 36 YS2-13h14.q1k vc_5 694 659 1 36 C 36 100.00 697 reject_low 9 ALIGNMENT 0 YS2-13h14.q1k vc_3 657 62 2512 2511 C 596 0.00 697 reject_low 4 ALIGNMENT 40 YS2-13h14.q1k vc_3 697 658 2472 2511 C 40 100.00 697 reject_low 4 ALIGNMENT 40 YS2-13h14.q1k vc_4 658 697 5832 5871 F 40 100.00 697 reject_low 5 ALIGNMENT 592 YS2-13h14.q1k chr12 39 657 1046015 1046633 F 619 99.68 697 accept_chi 1 ALIGNMENT 0 YS2-13h14.q1k vc_5 658 62 5064 5063 C 597 0.00 697 reject_low 6 ALIGNMENT 0 YS2-13h14.q1k vc_7 62 659 63 62 F 598 0.00 697 reject_low 7 ALIGNMENT 0 YS2-13h14.q1k vc_5 658 62 37 36 C 597 0.00 697 reject_low 9 ALIGNMENT 870 YS2-13h15.q1k chr12 31 1059 454810 455850 F 1029 95.14 1231 accept 0 ALIGNMENT 870 YS2-13h15.q1k chr12 31 1059 463947 464987 F 1029 95.14 1231 accept 1 ALIGNMENT 777 YS2-13h15.p1k chr12 951 28 467852 468777 C 924 96.00 1120 accept 1 ALIGNMENT 94 YS2-13h15.p1k chr06 253 360 31622 31729 F 108 98.15 1120 reject_low 2 ALIGNMENT 0 YS2-13h15.p1k chr06 62 252 31622 31621 F 191 0.00 1120 reject_low 2 ALIGNMENT 0 YS2-13h15.p1k chr06 361 676 31729 31728 F 316 0.00 1120 reject_low 2 ALIGNMENT 777 YS2-13h15.p1k chr12 951 28 458715 459640 C 924 96.00 1120 accept 0 ALIGNMENT 0 YS2-13h17.q1k vc_7 62 533 13525 13524 F 472 0.00 571 reject_low 7 ALIGNMENT 38 YS2-13h17.q1k vc_7 534 571 13525 13562 F 38 100.00 571 reject_low 7 ALIGNMENT 41 YS2-13h17.q1k vc_1 571 531 2472 2512 C 41 100.00 571 reject_low 2 ALIGNMENT 0 YS2-13h17.q1k vc_2 530 62 2146 2145 C 469 0.00 571 reject_low 3 ALIGNMENT 41 YS2-13h17.q1k vc_3 571 531 2472 2512 C 41 100.00 571 reject_low 4 ALIGNMENT 41 YS2-13h17.q1k vc_4 531 571 5831 5871 F 41 100.00 571 reject_low 5 ALIGNMENT 472 YS2-13h17.p1k chr13 31 523 836279 836771 F 493 99.59 541 accept_chi 1 ALIGNMENT 41 YS2-13h17.q1k vc_2 571 531 2105 2145 C 41 100.00 571 reject_low 3 ALIGNMENT 40 YS2-13h17.q1k vc_5 571 529 5025 5067 C 43 97.67 571 reject_low 6 ALIGNMENT 0 YS2-13h17.q1k vc_1 530 62 2513 2512 C 469 0.00 571 reject_low 2 ALIGNMENT 0 YS2-13h17.q1k vc_3 530 62 2513 2512 C 469 0.00 571 reject_low 4 ALIGNMENT 475 YS2-13h17.q1k chr13 531 39 836279 836771 C 493 99.80 571 accept_chi 0 ALIGNMENT 37 YS2-13h17.q1k vc_5 568 529 1 40 C 40 97.50 571 reject_low 8 ALIGNMENT 0 YS2-13h17.q1k chr13 571 532 836280 836279 C 40 0.00 571 accept_chi 0 ALIGNMENT 0 YS2-13h17.p1k chr13 524 541 836771 836770 F 18 0.00 541 accept_chi 1 ALIGNMENT 0 YS2-13h17.q1k vc_4 62 530 5831 5830 F 469 0.00 571 reject_low 5 ALIGNMENT 0 YS2-13h17.q1k vc_5 528 62 5068 5067 C 467 0.00 571 reject_low 6 ALIGNMENT 0 YS2-13h17.q1k vc_5 528 62 41 40 C 467 0.00 571 reject_low 8 ALIGNMENT 1016 YS2-13h18.p1k chr12 29 1187 664638 665805 F 1159 96.38 1262 accept_chi 0 ALIGNMENT 893 YS2-13h18.q1k chr07 45 1128 500020 501108 F 1084 94.37 1381 accept_chi 1 ALIGNMENT 0 YS2-13h19.q1k vc_5 327 62 37 36 C 266 0.00 366 reject_low 8 ALIGNMENT 0 YS2-13h19.q1k vc_3 321 62 2517 2516 C 260 0.00 366 reject_low 4 ALIGNMENT 265 YS2-13h19.p1k chr08 33 319 60012 60299 F 287 98.61 337 accept_chi 1 ALIGNMENT 38 YS2-13h19.q1k vc_7 329 366 13525 13562 F 38 100.00 366 reject_low 7 ALIGNMENT 0 YS2-13h19.p1k chr08 320 337 60299 60298 F 18 0.00 337 accept_chi 1 ALIGNMENT 0 YS2-13h19.q1k vc_2 321 62 2150 2149 C 260 0.00 366 reject_low 3 ALIGNMENT 44 YS2-13h19.q1k vc_4 322 366 5827 5871 F 45 100.00 366 reject_low 5 ALIGNMENT 44 YS2-13h19.q1k vc_1 366 322 2472 2516 C 45 100.00 366 reject_low 2 ALIGNMENT 0 YS2-13h19.q1k vc_1 321 62 2517 2516 C 260 0.00 366 reject_low 2 ALIGNMENT 39 YS2-13h19.q1k vc_5 366 328 5025 5063 C 39 100.00 366 reject_low 6 ALIGNMENT 44 YS2-13h19.q1k vc_2 366 322 2105 2149 C 45 100.00 366 reject_low 3 ALIGNMENT 44 YS2-13h19.q1k vc_3 366 322 2472 2516 C 45 100.00 366 reject_low 4 ALIGNMENT 36 YS2-13h19.q1k vc_5 363 328 1 36 C 36 100.00 366 reject_low 8 ALIGNMENT 0 YS2-13h19.q1k chr08 366 326 60013 60012 C 41 0.00 366 accept_chi 0 ALIGNMENT 270 YS2-13h19.q1k chr08 325 38 60012 60299 C 288 98.96 366 accept_chi 0 ALIGNMENT 0 YS2-13h19.q1k vc_7 62 328 13525 13524 F 267 0.00 366 reject_low 7 ALIGNMENT 0 YS2-13h19.q1k vc_5 327 62 5064 5063 C 266 0.00 366 reject_low 6 ALIGNMENT 0 YS2-13h19.q1k vc_4 62 321 5827 5826 F 260 0.00 366 reject_low 5 ALIGNMENT 34 YS2-13h20.q1k chrm 477 431 31037 31084 C 47 93.62 1353 reject_low 13 ALIGNMENT 20 YS2-13h20.p1k chrm 820 861 33492 33533 F 42 97.62 1248 reject_low 11 ALIGNMENT 49 YS2-13h20.q1k chrm 476 426 2750 2800 C 51 100.00 1353 reject_low 3 ALIGNMENT 46 YS2-13h20.q1k chrm 412 496 35785 35867 F 85 87.06 1353 reject_low 6 ALIGNMENT 0 YS2-13h20.q1k chrm 484 919 53877 53876 F 436 0.00 1353 reject_low 8 ALIGNMENT 49 YS2-13h20.q1k chrm 410 474 62837 62903 F 65 92.31 1353 accept 0 ALIGNMENT 0 YS2-13h20.p1k chrm 862 885 33533 33532 F 24 0.00 1248 reject_low 11 ALIGNMENT 0 YS2-13h20.p1k chrm 595 62 69544 69543 C 534 0.00 1248 reject_low 1 ALIGNMENT 49 YS2-13h20.p1k chrm 653 703 2750 2800 F 51 100.00 1248 reject_low 10 ALIGNMENT 55 YS2-13h20.p1k chrm 650 713 80 143 F 64 95.31 1248 reject_low 3 ALIGNMENT 0 YS2-13h20.q1k chrm 919 475 33450 33449 C 445 0.00 1353 reject_low 12 ALIGNMENT 20 YS2-13h20.q1k chrm 309 268 33492 33533 C 42 97.62 1353 reject_low 12,13 ALIGNMENT 501 YS2-13h20.q1k chrm 39 986 68658 69644 F 948 92.62 1353 reject_low 1 ALIGNMENT 0 YS2-13h20.p1k chrm 608 62 76681 76680 C 547 0.00 1248 reject_low 2 ALIGNMENT 41 YS2-13h20.q1k chrm 81 40 2843 2884 C 42 100.00 1353 reject_low 3 ALIGNMENT 0 YS2-13h20.q1k chrm 424 62 71264 71263 C 363 0.00 1353 reject_low 7 ALIGNMENT 0 YS2-13h20.q1k chrm 475 919 62903 62902 F 445 0.00 1353 accept 0 ALIGNMENT 0 YS2-13h20.q1k chrm 919 477 71213 71212 C 443 0.00 1353 reject_low 7 ALIGNMENT 0 YS2-13h20.q1k chrm 534 919 69543 69542 F 386 0.00 1353 reject_low 2 ALIGNMENT 0 YS2-13h20.q1k chrm 430 310 31085 33491 C 121 0.00 1353 reject_low 13 ALIGNMENT 0 YS2-13h20.q1k chrm 62 409 62837 62836 F 348 0.00 1353 accept 0 ALIGNMENT 0 YS2-13h20.p1k chrm 62 652 4535 4534 F 591 0.00 1248 reject_low 9 ALIGNMENT 0 YS2-13h20.p1k chrm 714 885 143 142 F 172 0.00 1248 reject_low 3 ALIGNMENT 44 YS2-13h20.q1k chrm 428 483 53823 53877 F 56 94.64 1353 reject_low 8 ALIGNMENT 29 YS2-13h20.p1k chrm 703 557 3052 3201 C 147 80.27 1248 reject_low 5 ALIGNMENT 52 YS2-13h20.q1k chrm 426 520 76588 76680 F 95 88.42 1353 reject_low 4 ALIGNMENT 29 YS2-13h20.p1k chrm 653 697 4535 4579 F 45 91.11 1248 reject_low 9 ALIGNMENT 0 YS2-13h20.q1k chrm 919 478 31038 31037 C 442 0.00 1353 reject_low 13 ALIGNMENT 0 YS2-13h20.q1k chrm 62 411 35785 35784 F 350 0.00 1353 reject_low 6 ALIGNMENT 51 YS2-13h20.q1k chrm 476 425 71212 71263 C 52 100.00 1353 reject_low 7 ALIGNMENT 0 YS2-13h20.p1k chrm 62 654 33449 33448 F 593 0.00 1248 reject_low 11 ALIGNMENT 0 YS2-13h20.p1k chrm 703 819 33496 33491 F 117 0.00 1248 reject_low 11 ALIGNMENT 38 YS2-13h20.p1k chrm 655 702 33449 33495 F 48 95.83 1248 reject_low 11 ALIGNMENT 0 YS2-13h20.p1k chrm 556 62 3202 3201 C 495 0.00 1248 reject_low 5 ALIGNMENT 0 YS2-13h20.p1k chrm 885 704 76589 76588 C 182 0.00 1248 reject_low 2 ALIGNMENT 0 YS2-13h20.p1k chrm 885 704 3053 3052 C 182 0.00 1248 reject_low 5 ALIGNMENT 0 YS2-13h20.p1k chrm 704 1030 2801 2822 F 327 0.00 1248 reject_low 10 ALIGNMENT 0 YS2-13h20.q1k chrm 521 919 76680 76679 F 399 0.00 1353 reject_low 4 ALIGNMENT 38 YS2-13h20.q1k chrm 474 427 33449 33495 C 48 95.83 1353 reject_low 12 ALIGNMENT 555 YS2-13h20.p1k chrm 1099 25 68651 69760 C 1075 92.74 1248 accept 0 ALIGNMENT 52 YS2-13h20.p1k chrm 703 609 76588 76680 C 95 88.42 1248 reject_low 2 ALIGNMENT 0 YS2-13h20.p1k chrm 62 652 2750 2749 F 591 0.00 1248 reject_low 10 ALIGNMENT 65 YS2-13h20.p1k chrm 701 596 69439 69543 C 106 90.57 1248 reject_low 1 ALIGNMENT 0 YS2-13h20.q1k chrm 426 310 33496 33491 C 117 0.00 1353 reject_low 12 ALIGNMENT 0 YS2-13h20.q1k chrm 425 82 2801 2842 C 344 0.00 1353 reject_low 3 ALIGNMENT 0 YS2-13h20.q1k chrm 62 425 76588 76587 F 364 0.00 1353 reject_low 4 ALIGNMENT 0 YS2-13h20.q1k chrm 919 477 2751 2750 C 443 0.00 1353 reject_low 3 ALIGNMENT 0 YS2-13h20.q1k chrm 62 427 53823 53822 F 366 0.00 1353 reject_low 8 ALIGNMENT 65 YS2-13h20.q1k chrm 428 533 69439 69543 F 106 90.57 1353 reject_low 2 ALIGNMENT 32 YS2-13h20.p1k chrm 1031 1086 2823 2879 F 56 83.93 1248 reject_low 10 ALIGNMENT 0 YS2-13h20.q1k chrm 62 427 69439 69438 F 366 0.00 1353 reject_low 2 ALIGNMENT 0 YS2-13h20.p1k chrm 62 649 80 79 F 588 0.00 1248 reject_low 3 ALIGNMENT 0 YS2-13h20.p1k chrm 885 702 69440 69439 C 184 0.00 1248 reject_low 1 ALIGNMENT 0 YS2-13h20.p1k chrm 698 885 4579 4578 F 188 0.00 1248 reject_low 9 ALIGNMENT 0 YS2-13h20.q1k chrm 267 62 33534 33533 C 206 0.00 1353 reject_low 12,13 ALIGNMENT 0 YS2-13h20.q1k chrm 497 919 35867 35866 F 423 0.00 1353 reject_low 6 ALIGNMENT 960 YS2-13h21.p1k chr16 1153 31 664690 665826 C 1123 96.08 1202 accept 0 ALIGNMENT 732 YS2-13h21.q1k chr16 36 927 659487 660375 F 892 94.28 1108 accept 0 ALIGNMENT 965 YS2-13h23.p1k chr11 1140 33 564944 566053 C 1108 96.48 1196 accept 0 ALIGNMENT 929 YS2-13h23.q1k chr11 37 1169 562336 563468 F 1133 95.32 1398 accept 0 ALIGNMENT 1021 YS2-13h24.q1k chr07 1221 36 64497 65693 C 1186 97.30 1342 accept 0 ALIGNMENT 971 YS2-13h24.p1k chr07 26 1179 64162 65305 F 1154 96.97 1196 accept 0 ALIGNMENT 896 YS2-13i01.p1k chr08 1169 64 272311 273409 C 1106 94.58 1173 accept 0 ALIGNMENT 1061 YS2-13i01.q1k chr08 39 1227 268381 269574 F 1189 97.48 1310 accept 0 ALIGNMENT 1040 YS2-13i02.q1k chr12 32 1218 853113 854310 F 1187 97.47 1359 accept 0 ALIGNMENT 966 YS2-13i03.p1k chr05 1116 29 178111 179196 C 1088 97.52 1169 accept_chi 0 ALIGNMENT 923 YS2-13i03.q1k chr05 41 1120 178111 179192 F 1080 96.76 1332 accept_chi 1 ALIGNMENT 905 YS2-13i04.p1k chr16 34 1115 236334 237436 F 1082 95.66 1172 accept_chi 1 ALIGNMENT 985 YS2-13i04.q1k chr07 37 1156 299909 301037 F 1120 96.61 1408 accept_chi 0 ALIGNMENT 922 YS2-13i05.p1k chr04 1126 29 27553 28666 C 1098 96.17 1190 accept 0 ALIGNMENT 883 YS2-13i05.q1k chr04 38 1044 24565 25586 F 1007 97.12 1274 accept 0 ALIGNMENT 850 YS2-13i08.p1k chr11 30 1155 390144 391283 F 1126 93.34 1249 accept 0 ALIGNMENT 823 YS2-13i08.q1k chr11 1096 35 390799 391872 C 1062 94.44 1370 accept 0 ALIGNMENT 0 YS2-13i09.q1k vc_5 529 62 37 36 C 468 0.00 568 reject_low 9 ALIGNMENT 0 YS2-13i09.p1k chr11 530 547 253826 253825 F 18 0.00 547 accept_chi 0 ALIGNMENT 41 YS2-13i09.q1k vc_2 568 528 2105 2145 C 41 100.00 568 reject_low 3 ALIGNMENT 0 YS2-13i09.q1k vc_7 62 530 63 62 F 469 0.00 568 reject_low 7 ALIGNMENT 0 YS2-13i09.q1k vc_3 527 62 2513 2512 C 466 0.00 568 reject_low 4 ALIGNMENT 36 YS2-13i09.q1k vc_5 565 530 1 36 C 36 100.00 568 reject_low 9 ALIGNMENT 41 YS2-13i09.q1k vc_3 568 528 2472 2512 C 41 100.00 568 reject_low 4 ALIGNMENT 0 YS2-13i09.q1k vc_7 62 530 13525 13524 F 469 0.00 568 reject_low 8 ALIGNMENT 39 YS2-13i09.q1k vc_5 568 530 5025 5063 C 39 100.00 568 reject_low 6 ALIGNMENT 41 YS2-13i09.q1k vc_1 568 528 2472 2512 C 41 100.00 568 reject_low 2 ALIGNMENT 0 YS2-13i09.q1k vc_5 529 62 5064 5063 C 468 0.00 568 reject_low 6 ALIGNMENT 0 YS2-13i09.q1k vc_2 527 62 2146 2145 C 466 0.00 568 reject_low 3 ALIGNMENT 470 YS2-13i09.p1k chr11 32 529 253329 253826 F 498 99.00 547 accept_chi 0 ALIGNMENT 0 YS2-13i09.q1k vc_1 527 62 2513 2512 C 466 0.00 568 reject_low 2 ALIGNMENT 0 YS2-13i09.q1k vc_4 62 527 5831 5830 F 466 0.00 568 reject_low 5 ALIGNMENT 467 YS2-13i09.q1k chr11 527 34 253328 253821 C 494 98.99 568 accept_chi 1 ALIGNMENT 0 YS2-13i09.q1k chr11 568 528 253329 253328 C 41 0.00 568 accept_chi 1 ALIGNMENT 38 YS2-13i09.q1k vc_7 531 568 63 100 F 38 100.00 568 reject_low 7 ALIGNMENT 41 YS2-13i09.q1k vc_4 528 568 5831 5871 F 41 100.00 568 reject_low 5 ALIGNMENT 38 YS2-13i09.q1k vc_7 531 568 13525 13562 F 38 100.00 568 reject_low 8 ALIGNMENT 296 YS2-13i10.p1k chr02 30 353 67952 68276 F 324 99.07 372 accept_chi 1 ALIGNMENT 0 YS2-13i10.q1k vc_7 62 362 13525 13524 F 301 0.00 400 reject_low 7 ALIGNMENT 41 YS2-13i10.q1k vc_4 360 400 5831 5871 F 41 100.00 400 reject_low 5 ALIGNMENT 0 YS2-13i10.q1k chr02 400 360 67953 67952 C 41 0.00 400 accept_chi 0 ALIGNMENT 0 YS2-13i10.q1k vc_5 361 62 5064 5063 C 300 0.00 400 reject_low 6 ALIGNMENT 41 YS2-13i10.q1k vc_2 400 360 2105 2145 C 41 100.00 400 reject_low 3 ALIGNMENT 0 YS2-13i10.q1k vc_5 361 62 37 36 C 300 0.00 400 reject_low 8 ALIGNMENT 41 YS2-13i10.q1k vc_1 400 360 2472 2512 C 41 100.00 400 reject_low 2 ALIGNMENT 39 YS2-13i10.q1k vc_5 400 362 5025 5063 C 39 100.00 400 reject_low 6 ALIGNMENT 300 YS2-13i10.q1k chr02 359 35 67952 68276 C 325 99.38 400 accept_chi 0 ALIGNMENT 36 YS2-13i10.q1k vc_5 397 362 1 36 C 36 100.00 400 reject_low 8 ALIGNMENT 41 YS2-13i10.q1k vc_3 400 360 2472 2512 C 41 100.00 400 reject_low 4 ALIGNMENT 0 YS2-13i10.q1k vc_4 62 359 5831 5830 F 298 0.00 400 reject_low 5 ALIGNMENT 0 YS2-13i10.p1k chr02 354 372 68276 68275 F 19 0.00 372 accept_chi 1 ALIGNMENT 0 YS2-13i10.q1k vc_3 359 62 2513 2512 C 298 0.00 400 reject_low 4 ALIGNMENT 38 YS2-13i10.q1k vc_7 363 400 13525 13562 F 38 100.00 400 reject_low 7 ALIGNMENT 0 YS2-13i10.q1k vc_1 359 62 2513 2512 C 298 0.00 400 reject_low 2 ALIGNMENT 0 YS2-13i10.q1k vc_2 359 62 2146 2145 C 298 0.00 400 reject_low 3 ALIGNMENT 255 YS2-13i11.q1k chr12 28 293 461717 461983 F 266 98.87 333 reject_low 1 ALIGNMENT 41 YS2-13i11.q1k vc_3 333 293 2472 2512 C 41 100.00 333 reject_low 4 ALIGNMENT 0 YS2-13i11.q1k vc_5 294 62 37 36 C 233 0.00 333 reject_low 8 ALIGNMENT 255 YS2-13i11.q1k chr12 28 293 452580 452846 F 266 98.87 333 accept 0 ALIGNMENT 41 YS2-13i11.q1k vc_1 333 293 2472 2512 C 41 100.00 333 reject_low 3 ALIGNMENT 0 YS2-13i11.q1k vc_4 62 292 5831 5830 F 231 0.00 333 reject_low 5 ALIGNMENT 39 YS2-13i11.q1k vc_5 333 295 5025 5063 C 39 100.00 333 reject_low 6 ALIGNMENT 0 YS2-13i11.q1k chr12 294 333 452846 452845 F 40 0.00 333 accept 0 ALIGNMENT 0 YS2-13i11.p1k chr12 325 310 452576 452575 C 16 0.00 325 reject_low 2 ALIGNMENT 0 YS2-13i11.q1k vc_3 292 62 2513 2512 C 231 0.00 333 reject_low 4 ALIGNMENT 0 YS2-13i11.q1k vc_1 292 62 2513 2512 C 231 0.00 333 reject_low 3 ALIGNMENT 41 YS2-13i11.q1k vc_4 293 333 5831 5871 F 41 100.00 333 reject_low 5 ALIGNMENT 0 YS2-13i11.q1k vc_5 294 62 5064 5063 C 233 0.00 333 reject_low 6 ALIGNMENT 239 YS2-13i11.p1k chr12 309 56 461712 461967 C 254 98.43 325 accept 0 ALIGNMENT 36 YS2-13i11.q1k vc_5 330 295 1 36 C 36 100.00 333 reject_low 8 ALIGNMENT 239 YS2-13i11.p1k chr12 309 56 452575 452830 C 254 98.43 325 reject_low 2 ALIGNMENT 0 YS2-13i11.q1k chr12 294 333 461983 461982 F 40 0.00 333 reject_low 1 ALIGNMENT 38 YS2-13i11.q1k vc_7 296 333 13525 13562 F 38 100.00 333 reject_low 7 ALIGNMENT 0 YS2-13i11.q1k vc_7 62 295 13525 13524 F 234 0.00 333 reject_low 7 ALIGNMENT 0 YS2-13i11.p1k chr12 325 310 461713 461712 C 16 0.00 325 accept 0 ALIGNMENT 359 YS2-13i13.q1k scplasm1 852 45 1 800 C 808 82.67 1408 accept 0 ALIGNMENT 220 YS2-13i13.q1k vc_6 886 321 5979 6535 C 566 81.27 1408 reject_low 2 ALIGNMENT 270 YS2-13i13.q1k scplasm1 45 505 3853 4310 F 461 86.98 1408 reject_low 1 ALIGNMENT 1008 YS2-13i14.p1k chr10 26 1200 601273 602454 F 1175 96.17 1255 accept 0 ALIGNMENT 846 YS2-13i14.q1k chr10 1011 36 602421 603409 C 976 96.72 1304 accept 0 ALIGNMENT 960 YS2-13i16.q1k chr04 1126 39 326896 327987 C 1088 97.79 1386 accept_chi 0 ALIGNMENT 948 YS2-13i16.p1k chr04 109 1205 326899 327999 F 1097 96.35 1328 accept_chi 1 ALIGNMENT 39 YS2-13i17.q1k vc_5 284 246 5025 5063 C 39 100.00 284 reject_low 2 ALIGNMENT 0 YS2-13i17.p1k chr10 255 237 559555 559554 C 19 0.00 255 accept_chi 0 ALIGNMENT 42 YS2-13i17.q1k vc_3 284 243 2472 2513 C 42 100.00 284 reject_low 6 ALIGNMENT 20 YS2-13i17.q1k vc_2 39 20 2145 2164 C 20 100.00 284 reject_low 5 ALIGNMENT 20 YS2-13i17.q1k vc_3 39 20 2512 2531 C 20 100.00 284 reject_low 6 ALIGNMENT 42 YS2-13i17.q1k vc_1 284 243 2472 2513 C 42 100.00 284 reject_low 4 ALIGNMENT 0 YS2-13i17.q1k vc_5 245 44 37 2374 C 202 0.00 284 reject_low 8 ALIGNMENT 0 YS2-13i17.q1k vc_5 245 62 5064 5063 C 184 0.00 284 reject_low 2 ALIGNMENT 0 YS2-13i17.q1k chr10 244 284 559758 559757 F 41 0.00 284 accept_chi 1 ALIGNMENT 42 YS2-13i17.q1k vc_4 243 284 5830 5871 F 42 100.00 284 reject_low 7 ALIGNMENT 176 YS2-13i17.q1k chr10 39 243 559554 559758 F 205 96.10 284 accept_chi 1 ALIGNMENT 0 YS2-13i17.q1k vc_2 242 40 2147 2144 C 203 0.00 284 reject_low 5 ALIGNMENT 20 YS2-13i17.q1k vc_4 20 39 5812 5831 F 20 100.00 284 reject_low 7 ALIGNMENT 174 YS2-13i17.p1k chr10 236 33 559554 559757 C 204 96.08 255 accept_chi 0 ALIGNMENT 0 YS2-13i17.q1k vc_3 242 40 2514 2511 C 203 0.00 284 reject_low 6 ALIGNMENT 24 YS2-13i17.q1k vc_5 43 20 2375 2398 C 24 100.00 284 reject_low 8 ALIGNMENT 20 YS2-13i17.q1k vc_1 39 20 2512 2531 C 20 100.00 284 reject_low 4 ALIGNMENT 0 YS2-13i17.q1k vc_4 40 242 5832 5829 F 203 0.00 284 reject_low 7 ALIGNMENT 36 YS2-13i17.q1k vc_5 281 246 1 36 C 36 100.00 284 reject_low 8 ALIGNMENT 0 YS2-13i17.q1k vc_7 62 246 13525 13524 F 185 0.00 284 reject_low 3 ALIGNMENT 38 YS2-13i17.q1k vc_7 247 284 13525 13562 F 38 100.00 284 reject_low 3 ALIGNMENT 0 YS2-13i17.q1k vc_1 242 40 2514 2511 C 203 0.00 284 reject_low 4 ALIGNMENT 42 YS2-13i17.q1k vc_2 284 243 2105 2146 C 42 100.00 284 reject_low 5 ALIGNMENT 0 YS2-13i19.q1k vc_3 521 62 2513 2512 C 460 0.00 562 reject_low 9 ALIGNMENT 0 YS2-13i19.q1k chr08 562 525 552510 552509 C 38 0.00 562 reject_low 4 ALIGNMENT 194 YS2-13i19.q1k chr01 524 55 225861 226330 C 470 80.64 562 reject_low 3 ALIGNMENT 38 YS2-13i19.q1k vc_7 525 562 13525 13562 F 38 100.00 562 reject_low 12 ALIGNMENT 194 YS2-13i19.q1k chr08 524 55 552509 552978 C 470 80.64 562 reject_low 4 ALIGNMENT 41 YS2-13i19.q1k vc_2 562 522 2105 2145 C 41 100.00 562 reject_low 8 ALIGNMENT 472 YS2-13i19.p1k chr02 544 58 428197 428684 C 487 99.18 561 reject_low 1 ALIGNMENT 0 YS2-13i19.q1k vc_2 521 62 2146 2145 C 460 0.00 562 reject_low 8 ALIGNMENT 41 YS2-13i19.q1k vc_4 522 562 5831 5871 F 41 100.00 562 reject_low 10 ALIGNMENT 0 YS2-13i19.p1k chr08 526 561 552978 552977 F 36 0.00 561 reject_low 6 ALIGNMENT 0 YS2-13i19.q1k vc_7 62 524 13525 13524 F 463 0.00 562 reject_low 12 ALIGNMENT 0 YS2-13i19.q1k vc_5 523 62 5064 5063 C 462 0.00 562 reject_low 11 ALIGNMENT 36 YS2-13i19.q1k vc_5 559 524 1 36 C 36 100.00 562 reject_low 13 ALIGNMENT 0 YS2-13i19.p1k chr01 526 561 226330 226329 F 36 0.00 561 reject_low 5 ALIGNMENT 192 YS2-13i19.p1k chr01 60 525 225866 226330 F 466 80.69 561 reject_low 5 ALIGNMENT 0 YS2-13i19.q1k vc_5 523 62 37 36 C 462 0.00 562 reject_low 13 ALIGNMENT 223 YS2-13i19.q1k chr02 68 524 430079 430535 F 457 83.15 562 reject_low 2 ALIGNMENT 0 YS2-13i19.q1k chr01 562 525 225862 225861 C 38 0.00 562 reject_low 3 ALIGNMENT 0 YS2-13i19.q1k chr02 525 562 430535 430534 F 38 0.00 562 reject_low 2 ALIGNMENT 0 YS2-13i19.q1k vc_4 62 521 5831 5830 F 460 0.00 562 reject_low 10 ALIGNMENT 192 YS2-13i19.p1k chr08 60 525 552514 552978 F 466 80.69 561 reject_low 6 ALIGNMENT 39 YS2-13i19.q1k vc_5 562 524 5025 5063 C 39 100.00 562 reject_low 11 ALIGNMENT 0 YS2-13i19.q1k chr02 524 562 428684 428683 F 39 0.00 562 accept 0 ALIGNMENT 212 YS2-13i19.p1k chr02 512 57 430079 430535 C 456 82.46 561 accept 0 ALIGNMENT 41 YS2-13i19.q1k vc_3 562 522 2472 2512 C 41 100.00 562 reject_low 9 ALIGNMENT 0 YS2-13i19.p1k chr02 561 513 430080 430079 C 49 0.00 561 accept 0 ALIGNMENT 0 YS2-13i19.q1k vc_1 521 62 2513 2512 C 460 0.00 562 reject_low 7 ALIGNMENT 41 YS2-13i19.q1k vc_1 562 522 2472 2512 C 41 100.00 562 reject_low 7 ALIGNMENT 475 YS2-13i19.q1k chr02 36 523 428197 428684 F 488 99.18 562 accept 0 ALIGNMENT 0 YS2-13i19.p1k chr02 561 545 428198 428197 C 17 0.00 561 reject_low 1 ALIGNMENT 1004 YS2-13i20.p1k chr13 1239 88 50185 51332 C 1152 96.35 1290 accept 0 ALIGNMENT 1002 YS2-13i20.q1k chr13 30 1143 50171 51302 F 1114 97.67 1352 accept 0 ALIGNMENT 1017 YS2-13i21.q1k chr07 38 1227 833804 835002 F 1190 96.30 1321 accept 0 ALIGNMENT 959 YS2-13i21.p1k chr07 1135 25 835537 836649 C 1111 96.67 1148 accept 0 ALIGNMENT 0 YS2-13i24.q1k vc_4 62 195 5831 5830 F 134 0.00 236 reject_low 4 ALIGNMENT 0 YS2-13i24.q1k vc_1 195 62 2513 2512 C 134 0.00 236 reject_low 1 ALIGNMENT 41 YS2-13i24.q1k vc_1 236 196 2472 2512 C 41 100.00 236 reject_low 1 ALIGNMENT 0 YS2-13i24.q1k chr05 236 198 104174 104173 C 39 0.00 236 accept 0 ALIGNMENT 0 YS2-13i24.q1k vc_2 195 62 2146 2145 C 134 0.00 236 reject_low 2 ALIGNMENT 36 YS2-13i24.q1k vc_5 233 198 1 36 C 36 100.00 236 reject_low 7 ALIGNMENT 41 YS2-13i24.q1k vc_2 236 196 2105 2145 C 41 100.00 236 reject_low 2 ALIGNMENT 0 YS2-13i24.q1k vc_7 62 198 13525 13524 F 137 0.00 236 reject_low 6 ALIGNMENT 41 YS2-13i24.q1k vc_3 236 196 2472 2512 C 41 100.00 236 reject_low 3 ALIGNMENT 38 YS2-13i24.q1k vc_7 199 236 13525 13562 F 38 100.00 236 reject_low 6 ALIGNMENT 0 YS2-13i24.q1k vc_5 197 62 5064 5063 C 136 0.00 236 reject_low 5 ALIGNMENT 0 YS2-13i24.q1k vc_3 195 62 2513 2512 C 134 0.00 236 reject_low 3 ALIGNMENT 41 YS2-13i24.q1k vc_4 196 236 5831 5871 F 41 100.00 236 reject_low 4 ALIGNMENT 0 YS2-13i24.q1k vc_5 197 62 37 36 C 136 0.00 236 reject_low 7 ALIGNMENT 39 YS2-13i24.q1k vc_5 236 198 5025 5063 C 39 100.00 236 reject_low 5 ALIGNMENT 144 YS2-13i24.q1k chr05 197 44 104173 104325 C 154 99.35 236 accept 0 ALIGNMENT 988 YS2-13j01.q1k chr04 29 1139 797039 798160 F 1111 97.57 1344 accept 0 ALIGNMENT 1014 YS2-13j01.p1k chr04 1191 30 800314 801483 C 1162 96.30 1193 accept 0 ALIGNMENT 0 YS2-13j02.q1k vc_1 1114 62 2506 2505 C 1053 0.00 1415 reject_low 2 ALIGNMENT 0 YS2-13j02.q1k vc_4 62 1114 5838 5837 F 1053 0.00 1415 reject_low 4 ALIGNMENT 33 YS2-13j02.q1k vc_4 1115 1148 5838 5871 F 34 97.06 1415 reject_low 4 ALIGNMENT 973 YS2-13j02.q1k chr07 1107 31 398535 399613 C 1077 96.94 1415 accept_chi 0 ALIGNMENT 30 YS2-13j02.q1k vc_5 1145 1115 1 31 C 31 96.77 1415 reject_low 7 ALIGNMENT 0 YS2-13j02.q1k vc_5 1114 62 32 31 C 1053 0.00 1415 reject_low 7 ALIGNMENT 33 YS2-13j02.q1k vc_1 1148 1115 2472 2505 C 34 97.06 1415 reject_low 2 ALIGNMENT 33 YS2-13j02.q1k vc_7 1115 1148 13529 13562 F 34 97.06 1415 reject_low 6 ALIGNMENT 0 YS2-13j02.q1k vc_7 62 1114 13529 13528 F 1053 0.00 1415 reject_low 6 ALIGNMENT 33 YS2-13j02.q1k vc_3 1148 1115 2472 2505 C 34 97.06 1415 reject_low 3 ALIGNMENT 970 YS2-13j02.p1k chr07 25 1098 398535 399616 F 1074 97.02 1156 accept_chi 1 ALIGNMENT 0 YS2-13j02.q1k vc_3 1114 62 2506 2505 C 1053 0.00 1415 reject_low 3 ALIGNMENT 0 YS2-13j02.q1k vc_5 1114 62 5059 5058 C 1053 0.00 1415 reject_low 5 ALIGNMENT 33 YS2-13j02.q1k vc_5 1148 1115 5025 5058 C 34 97.06 1415 reject_low 5 ALIGNMENT 1010 YS2-13j03.q1k chr02 1137 30 234080 235198 C 1108 98.47 1352 accept 0 ALIGNMENT 1007 YS2-13j03.p1k chr02 35 1194 233716 234892 F 1160 96.72 1209 accept 0 ALIGNMENT 0 YS2-13j04.q1k chr09 62 76 430454 430453 F 15 0.00 1308 reject_low 1 ALIGNMENT 0 YS2-13j04.p1k chr01 62 961 176651 176650 F 900 0.00 1218 reject_low 16 ALIGNMENT 819 YS2-13j04.q1k chr07 1085 29 8905 9971 C 1057 93.76 1308 accept 0 ALIGNMENT 0 YS2-13j04.q1k chr09 421 420 430800 430980 F 0 0.00 1308 reject_low 1 ALIGNMENT 166 YS2-13j04.p1k chr12 869 1195 12992 13318 F 327 83.49 1218 reject_low 6 ALIGNMENT 165 YS2-13j04.p1k chr05 1167 954 63884 64100 C 214 91.12 1218 reject_low 14 ALIGNMENT 166 YS2-13j04.p1k chr15 869 1195 11458 11783 F 327 83.79 1218 reject_low 8 ALIGNMENT 0 YS2-13j04.p1k chr12 903 62 1063339 1063338 C 842 0.00 1218 reject_low 10 ALIGNMENT 115 YS2-13j04.p1k chr01 962 1167 176651 176859 F 206 83.98 1218 reject_low 16 ALIGNMENT 0 YS2-13j04.p1k chr12 62 868 12992 12991 F 807 0.00 1218 reject_low 6 ALIGNMENT 186 YS2-13j04.p1k chr08 933 1195 11890 12156 F 263 89.35 1218 reject_low 9 ALIGNMENT 0 YS2-13j04.p1k chr02 905 62 809473 809472 C 844 0.00 1218 reject_low 13 ALIGNMENT 85 YS2-13j04.p1k chr13 1140 929 922831 923046 C 212 79.25 1218 reject_low 19 ALIGNMENT 0 YS2-13j04.p1k chr10 62 1031 709322 709321 F 970 0.00 1218 reject_low 20 ALIGNMENT 177 YS2-13j04.p1k chr10 869 1195 8676 9011 F 327 84.10 1218 reject_low 5 ALIGNMENT 0 YS2-13j04.p1k chr08 62 932 11890 11889 F 871 0.00 1218 reject_low 9 ALIGNMENT 0 YS2-13j04.p1k chr16 62 903 7876 7875 F 842 0.00 1218 reject_low 17 ALIGNMENT 166 YS2-13j04.p1k chr14 1195 869 782045 782371 C 327 83.49 1218 reject_low 7 ALIGNMENT 109 YS2-13j04.p1k chr11 869 1195 1713 2046 F 327 77.06 1218 reject_low 15 ALIGNMENT 0 YS2-13j04.p1k chr04 868 62 1523695 1523694 C 807 0.00 1218 reject_low 2 ALIGNMENT 175 YS2-13j04.p1k chr07 1195 933 1080439 1080705 C 263 87.83 1218 reject_low 11 ALIGNMENT 0 YS2-13j04.p1k chr01 62 953 1797 1796 F 892 0.00 1218 reject_low 12 ALIGNMENT 172 YS2-13j04.q1k chr09 77 422 430454 430801 F 346 83.82 1308|0,2 reject_low 1 ALIGNMENT 177 YS2-13j04.p1k chr01 954 1195 1797 2042 F 242 90.08 1218 reject_low 12 ALIGNMENT 191 YS2-13j04.p1k chr04 1195 869 1523359 1523694 C 327 85.63 1218 reject_low 2 ALIGNMENT 0 YS2-13j04.p1k chr15 911 62 1083259 1083258 C 850 0.00 1218 reject_low 18 ALIGNMENT 0 YS2-13j04.p1k chr13 928 62 923047 923046 C 867 0.00 1218 reject_low 19 ALIGNMENT 184 YS2-13j04.p1k chr02 869 1195 7514 7840 F 327 85.32 1218 reject_low 3 ALIGNMENT 0 YS2-13j04.p1k chr10 62 868 8676 8675 F 807 0.00 1218 reject_low 5 ALIGNMENT 177 YS2-13j04.p1k chr09 869 1195 8693 9028 F 327 84.10 1218 reject_low 4 ALIGNMENT 0 YS2-13j04.p1k chr15 62 868 11458 11457 F 807 0.00 1218 reject_low 8 ALIGNMENT 89 YS2-13j04.p1k chr15 1140 912 1083026 1083258 C 229 78.60 1218 reject_low 18 ALIGNMENT 40 YS2-13j04.p1k chr10 1032 1100 709322 709391 F 69 85.51 1218 reject_low 20 ALIGNMENT 0 YS2-13j04.p1k chr11 62 868 1713 1712 F 807 0.00 1218 reject_low 15 ALIGNMENT 0 YS2-13j04.p1k chr07 932 62 1080706 1080705 C 871 0.00 1218 reject_low 11 ALIGNMENT 154 YS2-13j04.p1k chr02 1195 906 809178 809472 C 290 83.45 1218 reject_low 13 ALIGNMENT 0 YS2-13j04.p1k chr14 868 62 782372 782371 C 807 0.00 1218 reject_low 7 ALIGNMENT 88 YS2-13j04.p1k chr16 904 1140 7876 8115 F 237 78.48 1218 reject_low 17 ALIGNMENT 95 YS2-13j04.q1k chr09 419 950 430979 431511 F 532 74.81 1308|2,0 reject_low 1 ALIGNMENT 174 YS2-13j04.p1k chr12 1195 904 1063043 1063338 C 292 85.62 1218 reject_low 10 ALIGNMENT 0 YS2-13j04.p1k chr09 62 868 8693 8692 F 807 0.00 1218 reject_low 4 ALIGNMENT 1042 YS2-13j04.p1k chr07 27 1195 5353 6525 F 1169 97.18 1218 accept 0 ALIGNMENT 0 YS2-13j04.p1k chr05 953 62 64101 64100 C 892 0.00 1218 reject_low 14 ALIGNMENT 0 YS2-13j04.p1k chr02 62 868 7514 7513 F 807 0.00 1218 reject_low 3 ALIGNMENT 0 YS2-13j06.q1k chrm 251 942 47543 47542 F 692 0.00 1362 reject_low 5 ALIGNMENT 0 YS2-13j06.q1k chrm 516 510 29496 29551 C 7 0.00 1362 accept 0 ALIGNMENT 0 YS2-13j06.q1k chrm 942 225 50110 50109 C 718 0.00 1362 reject_low 7 ALIGNMENT 39 YS2-13j06.q1k chrm 306 177 34857 34980 C 130 82.31 1362 reject_low 3 ALIGNMENT 49 YS2-13j06.q1k chrm 245 157 34265 34352 C 89 87.64 1362 reject_low 1 ALIGNMENT 0 YS2-13j06.q1k chrm 942 307 34858 34857 C 636 0.00 1362 reject_low 3 ALIGNMENT 0 YS2-13j06.q1k chrm 942 246 34266 34265 C 697 0.00 1362 reject_low 1 ALIGNMENT 0 YS2-13j06.q1k chrm 225 942 12312 12311 F 718 0.00 1362 reject_low 6 ALIGNMENT 39 YS2-13j06.q1k chrm 181 260 33449 33530 F 80 85.00 1362 reject_low 4 ALIGNMENT 0 YS2-13j06.q1k chrm 62 117 71157 71156 F 56 0.00 1362 reject_low 2 ALIGNMENT 0 YS2-13j06.p1k chrm 62 896 29553 29552 F 835 0.00 1247 reject_low 1 ALIGNMENT 0 YS2-13j06.q1k chrm 240 942 71271 71270 F 703 0.00 1362 reject_low 2 ALIGNMENT 0 YS2-13j06.q1k chrm 942 225 83053 83052 C 718 0.00 1362 reject_low 10 ALIGNMENT 39 YS2-13j06.q1k chrm 224 179 83052 83097 C 46 97.83 1362 reject_low 10 ALIGNMENT 0 YS2-13j06.q1k chrm 62 180 33449 33448 F 119 0.00 1362 reject_low 4 ALIGNMENT 0 YS2-13j06.q1k chrm 62 176 12265 12264 F 115 0.00 1362 reject_low 6 ALIGNMENT 42 YS2-13j06.q1k chrm 224 177 50109 50156 C 48 97.92 1362 reject_low 7 ALIGNMENT 0 YS2-13j06.q1k chrm 156 62 34353 34352 C 95 0.00 1362 reject_low 1 ALIGNMENT 0 YS2-13j06.q1k chrm 178 62 83098 83097 C 117 0.00 1362 reject_low 10 ALIGNMENT 0 YS2-13j06.q1k chrm 942 227 43094 43093 C 716 0.00 1362 reject_low 8 ALIGNMENT 41 YS2-13j06.q1k chrm 118 239 71157 71271 F 122 82.79 1362 reject_low 2 ALIGNMENT 44 YS2-13j06.q1k chrm 663 517 29349 29495 C 147 89.12 1362 accept 0 ALIGNMENT 0 YS2-13j06.q1k chrm 261 942 33530 33529 F 682 0.00 1362 reject_low 4 ALIGNMENT 0 YS2-13j06.q1k chrm 176 62 43143 43142 C 115 0.00 1362 reject_low 8 ALIGNMENT 45 YS2-13j06.q1k chrm 177 224 12265 12312 F 48 100.00 1362 reject_low 6 ALIGNMENT 0 YS2-13j06.q1k chrm 62 179 47474 47473 F 118 0.00 1362 reject_low 5 ALIGNMENT 41 YS2-13j06.q1k chrm 226 177 43093 43142 C 50 96.00 1362 reject_low 8 ALIGNMENT 0 YS2-13j06.q1k chrm 176 62 34981 34980 C 115 0.00 1362 reject_low 3 ALIGNMENT 39 YS2-13j06.q1k chrm 226 179 81400 81447 C 48 95.83 1362 reject_low 9 ALIGNMENT 0 YS2-13j06.q1k chrm 176 62 50157 50156 C 115 0.00 1362 reject_low 7 ALIGNMENT 45 YS2-13j06.q1k chrm 180 250 47474 47543 F 71 90.14 1362 reject_low 5 ALIGNMENT 0 YS2-13j06.q1k chrm 942 227 81401 81400 C 716 0.00 1362 reject_low 9 ALIGNMENT 0 YS2-13j06.q1k chrm 942 664 29350 29349 C 279 0.00 1362 accept 0 ALIGNMENT 62 YS2-13j06.p1k chrm 897 1207 29553 29888 F 311 80.39 1247 reject_low 1 ALIGNMENT 0 YS2-13j06.q1k chrm 178 62 81448 81447 C 117 0.00 1362 reject_low 9 ALIGNMENT 339 YS2-13j06.q1k chrm 509 37 29552 30025 C 473 98.94 1362 accept 0 ALIGNMENT 1025 YS2-13j07.p1k chr10 1259 31 558567 559816 C 1229 94.96 1259 accept 0 ALIGNMENT 1039 YS2-13j07.q1k chr10 39 1235 555022 556227 F 1197 96.16 1432 accept 0 ALIGNMENT 0 YS2-13j10.q1k vc_3 62 745 2531 2530 F 684 0.00 1448 reject_low 4 ALIGNMENT 0 YS2-13j10.q1k vc_5 707 62 37 36 C 646 0.00 1448 reject_low 17 ALIGNMENT 87 YS2-13j10.q1k vc_4 834 746 1446 1534 C 89 100.00 1448 reject_low 18 ALIGNMENT 0 YS2-13j10.q1k vc_2 62 745 2164 2163 F 684 0.00 1448 reject_low 3 ALIGNMENT 23 YS2-13j10.q1k vc_4 1194 1137 6277 6339 C 58 82.76 1448 reject_low 19 ALIGNMENT 364 YS2-13j10.q1k vc_3 746 1194 2531 2988 F 449 93.10 1448 reject_low 4 ALIGNMENT 0 YS2-13j10.q1k vc_7 62 708 13525 13524 F 647 0.00 1448 reject_low 16 ALIGNMENT 0 YS2-13j10.q1k vc_4 1136 835 113 1445 C 302 0.00 1448 reject_low 18 ALIGNMENT 0 YS2-13j10.q1k vc_5 905 747 5026 5025 C 159 0.00 1448 reject_low 14 ALIGNMENT 38 YS2-13j10.q1k vc_7 709 746 63 100 F 38 100.00 1448 reject_low 15 ALIGNMENT 23 YS2-13j10.q1k vc_4 1137 1194 1548 1610 F 58 82.76 1448 reject_low 10 ALIGNMENT 23 YS2-13j10.q1k vc_4 1194 1137 50 112 C 58 82.76 1448 reject_low 18 ALIGNMENT 46 YS2-13j10.q1k vc_7 956 906 6360 6411 C 51 98.04 1448|1,0 reject_low 8 ALIGNMENT 364 YS2-13j10.q1k vc_7 1194 746 2270 2727 C 449 93.10 1448 reject_low 6 ALIGNMENT 0 YS2-13j10.q1k vc_1 705 62 2513 2512 C 644 0.00 1448 reject_low 11 ALIGNMENT 0 YS2-13j10.q1k chr16 905 707 300926 300925 C 199 0.00 1448 accept_chi 1 ALIGNMENT 0 YS2-13j10.q1k vc_4 747 746 5872 6353 F 0 0.00 1448 reject_low 9 ALIGNMENT 0 YS2-13j10.q1k vc_4 62 705 5831 5830 F 644 0.00 1448 reject_low 9 ALIGNMENT 0 YS2-13j10.q1k vc_4 62 745 126 125 F 684 0.00 1448 reject_low 10 ALIGNMENT 0 YS2-13j10.q1k vc_7 62 708 63 62 F 647 0.00 1448 reject_low 15 ALIGNMENT 0 YS2-13j10.q1k vc_7 747 905 100 99 F 159 0.00 1448 reject_low 15 ALIGNMENT 38 YS2-13j10.q1k vc_7 709 746 13525 13562 F 38 100.00 1448 reject_low 16 ALIGNMENT 364 YS2-13j10.q1k vc_1 746 1194 2531 2988 F 449 93.10 1448 reject_low 2 ALIGNMENT 0 YS2-13j10.q1k vc_7 955 956 5172 6360 C 0 0.00 1448 reject_low 8 ALIGNMENT 152 YS2-13j10.q1k vc_4 746 907 126 287 F 162 98.15 1448 reject_low 10 ALIGNMENT 640 YS2-13j10.q1k chr16 706 30 300925 301604 C 677 99.41 1448 accept_chi 1 ALIGNMENT 0 YS2-13j10.q1k vc_4 1136 62 6340 6339 C 1075 0.00 1448 reject_low 19 ALIGNMENT 41 YS2-13j10.q1k vc_1 746 706 2472 2512 C 41 100.00 1448 reject_low 11 ALIGNMENT 0 YS2-13j10.q1k vc_1 62 745 2531 2530 F 684 0.00 1448 reject_low 2 ALIGNMENT 41 YS2-13j10.q1k vc_4 706 746 5831 5871 F 41 100.00 1448 reject_low 9 ALIGNMENT 0 YS2-13j10.q1k vc_7 747 905 13562 13561 F 159 0.00 1448 reject_low 16 ALIGNMENT 0 YS2-13j10.q1k vc_3 705 62 2513 2512 C 644 0.00 1448 reject_low 13 ALIGNMENT 0 YS2-13j10.q1k vc_3 905 747 2473 2472 C 159 0.00 1448 reject_low 13 ALIGNMENT 357 YS2-13j10.q1k vc_4 1194 746 5353 5812 C 449 92.65 1448 reject_low 7 ALIGNMENT 650 YS2-13j10.p1k chr16 34 712 300925 301604 F 679 99.71 729 accept_chi 0 ALIGNMENT 0 YS2-13j10.q1k vc_7 745 62 2728 2727 C 684 0.00 1448 reject_low 6 ALIGNMENT 0 YS2-13j10.q1k vc_4 745 62 5813 5812 C 684 0.00 1448 reject_low 7 ALIGNMENT 0 YS2-13j10.q1k vc_7 905 62 6412 6411 C 844 0.00 1448 reject_low 8 ALIGNMENT 364 YS2-13j10.q1k vc_5 746 1194 2398 2855 F 449 93.10 1448 reject_low 5 ALIGNMENT 41 YS2-13j10.q1k vc_3 746 706 2472 2512 C 41 100.00 1448 reject_low 13 ALIGNMENT 0 YS2-13j10.q1k vc_2 905 747 2106 2105 C 159 0.00 1448 reject_low 12 ALIGNMENT 39 YS2-13j10.q1k vc_5 746 708 5025 5063 C 39 100.00 1448 reject_low 14 ALIGNMENT 0 YS2-13j10.q1k vc_5 62 745 2398 2397 F 684 0.00 1448 reject_low 5 ALIGNMENT 0 YS2-13j10.q1k vc_5 707 62 5064 5063 C 646 0.00 1448 reject_low 14 ALIGNMENT 41 YS2-13j10.q1k vc_2 746 706 2105 2145 C 41 100.00 1448 reject_low 12 ALIGNMENT 0 YS2-13j10.q1k vc_4 745 62 1535 1534 C 684 0.00 1448 reject_low 18 ALIGNMENT 0 YS2-13j10.q1k vc_5 905 744 2 1 C 162 0.00 1448 reject_low 17 ALIGNMENT 36 YS2-13j10.q1k vc_5 743 708 1 36 C 36 100.00 1448 reject_low 17 ALIGNMENT 0 YS2-13j10.q1k vc_4 908 1136 288 1547 F 229 0.00 1448 reject_low 10 ALIGNMENT 166 YS2-13j10.q1k vc_7 1194 955 4925 5172 C 240 88.33 1448|0,1 reject_low 8 ALIGNMENT 0 YS2-13j10.q1k vc_1 905 747 2473 2472 C 159 0.00 1448 reject_low 11 ALIGNMENT 364 YS2-13j10.q1k vc_2 746 1194 2164 2621 F 449 93.10 1448 reject_low 3 ALIGNMENT 0 YS2-13j10.p1k chr16 713 729 301604 301603 F 17 0.00 729 accept_chi 0 ALIGNMENT 152 YS2-13j10.q1k vc_4 746 907 6353 6514 F 162 98.15 1448|1,0 reject_low 9 ALIGNMENT 0 YS2-13j10.q1k vc_2 705 62 2146 2145 C 644 0.00 1448 reject_low 12 ALIGNMENT 41 YS2-13j11.q1k vc_1 409 369 2472 2512 C 41 100.00 409 reject_low 2 ALIGNMENT 38 YS2-13j11.q1k vc_7 372 409 13525 13562 F 38 100.00 409 reject_low 7 ALIGNMENT 0 YS2-13j11.p1k chr16 361 379 866372 866371 F 19 0.00 379 accept_chi 0 ALIGNMENT 0 YS2-13j11.q1k chr16 409 370 866042 866041 C 40 0.00 409 accept_chi 1 ALIGNMENT 39 YS2-13j11.q1k vc_5 409 371 5025 5063 C 39 100.00 409 reject_low 6 ALIGNMENT 0 YS2-13j11.q1k vc_1 368 62 2513 2512 C 307 0.00 409 reject_low 2 ALIGNMENT 0 YS2-13j11.q1k vc_4 62 368 5831 5830 F 307 0.00 409 reject_low 5 ALIGNMENT 36 YS2-13j11.q1k vc_5 406 371 1 36 C 36 100.00 409 reject_low 8 ALIGNMENT 41 YS2-13j11.q1k vc_3 409 369 2472 2512 C 41 100.00 409 reject_low 4 ALIGNMENT 41 YS2-13j11.q1k vc_4 369 409 5831 5871 F 41 100.00 409 reject_low 5 ALIGNMENT 304 YS2-13j11.q1k chr16 369 39 866041 866372 C 331 99.40 409 accept_chi 1 ALIGNMENT 0 YS2-13j11.q1k vc_7 62 371 13525 13524 F 310 0.00 409 reject_low 7 ALIGNMENT 304 YS2-13j11.p1k chr16 30 360 866041 866372 F 331 99.40 379 accept_chi 0 ALIGNMENT 0 YS2-13j11.q1k vc_5 370 62 5064 5063 C 309 0.00 409 reject_low 6 ALIGNMENT 41 YS2-13j11.q1k vc_2 409 369 2105 2145 C 41 100.00 409 reject_low 3 ALIGNMENT 0 YS2-13j11.q1k vc_5 370 62 37 36 C 309 0.00 409 reject_low 8 ALIGNMENT 0 YS2-13j11.q1k vc_2 368 62 2146 2145 C 307 0.00 409 reject_low 3 ALIGNMENT 0 YS2-13j11.q1k vc_3 368 62 2513 2512 C 307 0.00 409 reject_low 4 ALIGNMENT 954 YS2-13j13.p1k chr11 30 1100 82341 83419 F 1071 96.64 1242 accept 0 ALIGNMENT 943 YS2-13j13.q1k chr11 1134 38 85082 86196 C 1097 96.90 1408 accept 0 ALIGNMENT 976 YS2-13j15.p1k chr04 1164 35 132758 133893 C 1130 95.75 1256 accept 0 ALIGNMENT 340 YS2-13j15.p1k chr04 444 35 227480 227890 C 410 94.88 1256 reject_low 1 ALIGNMENT 0 YS2-13j15.p1k chr04 875 445 227481 227480 C 431 0.00 1256 reject_low 1 ALIGNMENT 889 YS2-13j15.q1k chr04 32 1064 130546 131593 F 1033 96.61 1375 accept 0 ALIGNMENT 919 YS2-13j16.p1k chr16 29 1118 355890 356999 F 1090 95.60 1246 accept 0 ALIGNMENT 945 YS2-13j16.q1k chr16 1173 41 356996 358149 C 1133 95.23 1410 accept 0 ALIGNMENT 789 YS2-13j17.p1k chr11 1066 59 453680 454689 C 1008 93.85 1138 accept 0 ALIGNMENT 896 YS2-13j17.q1k chr11 39 1118 449758 450846 F 1080 95.28 1387 accept 0 ALIGNMENT 979 YS2-13j18.q1k chr09 1193 39 202468 203637 C 1155 95.93 1400 accept 0 ALIGNMENT 942 YS2-13j18.p1k chr09 53 1191 199484 200626 F 1139 95.08 1246 accept 0 ALIGNMENT 97 YS2-13j19.p1k chr06 146 245 210597 210696 F 100 99.00 1236 reject_low 2 ALIGNMENT 94 YS2-13j19.p1k chr04 245 149 946305 946401 C 97 98.97 1236 reject_low 6 ALIGNMENT 99 YS2-13j19.p1k chr15 254 147 288182 288289 C 108 97.22 1236 reject_low 1 ALIGNMENT 0 YS2-13j19.p1k chr06 146 62 167528 167527 C 85 0.00 1236 reject_low 3 ALIGNMENT 0 YS2-13j19.p1k chr06 62 145 210597 210596 F 84 0.00 1236 reject_low 2 ALIGNMENT 710 YS2-13j19.p1k chr13 1234 353 167455 168348 C 882 94.67 1236|0,3 accept 0 ALIGNMENT 0 YS2-13j19.p1k chr04 148 62 946402 946401 C 87 0.00 1236 reject_low 6 ALIGNMENT 0 YS2-13j19.p1k chr10 909 248 354158 354157 C 662 0.00 1236 reject_low 5 ALIGNMENT 0 YS2-13j19.p1k chr06 246 909 210696 210695 F 664 0.00 1236 reject_low 2 ALIGNMENT 0 YS2-13j19.p1k chr13 355 356 168346 168683 C 0 0.00 1236 accept 0 ALIGNMENT 93 YS2-13j19.p1k chr10 247 149 354157 354255 C 99 97.98 1236 reject_low 5 ALIGNMENT 283 YS2-13j19.p1k chr13 357 41 168682 168999 C 317 97.16 1236|2,0 accept 0 ALIGNMENT 0 YS2-13j19.p1k chr10 246 909 542959 542958 F 664 0.00 1236 reject_low 7 ALIGNMENT 94 YS2-13j19.p1k chr10 149 245 542863 542959 F 97 98.97 1236 reject_low 7 ALIGNMENT 0 YS2-13j19.p1k chr15 146 62 288290 288289 C 85 0.00 1236 reject_low 1 ALIGNMENT 96 YS2-13j19.p1k chr06 245 147 167429 167527 C 99 98.99 1236 reject_low 3 ALIGNMENT 0 YS2-13j19.p1k chr10 62 148 542863 542862 F 87 0.00 1236 reject_low 7 ALIGNMENT 96 YS2-13j19.p1k chr13 245 147 837926 838024 C 99 98.99 1236 reject_low 4 ALIGNMENT 0 YS2-13j19.p1k chr13 146 62 838025 838024 C 85 0.00 1236 reject_low 4 ALIGNMENT 0 YS2-13j19.p1k chr06 909 246 167430 167429 C 664 0.00 1236 reject_low 3 ALIGNMENT 0 YS2-13j19.p1k chr10 148 62 354256 354255 C 87 0.00 1236 reject_low 5 ALIGNMENT 0 YS2-13j19.p1k chr13 909 246 837927 837926 C 664 0.00 1236 reject_low 4 ALIGNMENT 973 YS2-13j19.q1k chr13 31 1181 165974 167142 F 1151 95.31 1376 accept 0 ALIGNMENT 0 YS2-13j19.p1k chr15 909 255 288183 288182 C 655 0.00 1236 reject_low 1 ALIGNMENT 0 YS2-13j19.p1k chr04 909 246 946306 946305 C 664 0.00 1236 reject_low 6 ALIGNMENT 94 YS2-13j20.p1k chr04 239 143 946305 946401 C 97 98.97 1238 reject_low 6 ALIGNMENT 653 YS2-13j20.p1k chr13 1202 347 167488 168348 C 856 93.11 1238|0,3 accept 0 ALIGNMENT 0 YS2-13j20.p1k chr06 140 62 167528 167527 C 79 0.00 1238 reject_low 3 ALIGNMENT 0 YS2-13j20.p1k chr15 140 62 288290 288289 C 79 0.00 1238 reject_low 1 ALIGNMENT 96 YS2-13j20.p1k chr06 239 141 167429 167527 C 99 98.99 1238 reject_low 3 ALIGNMENT 0 YS2-13j20.p1k chr13 349 350 168346 168683 C 0 0.00 1238 accept 0 ALIGNMENT 96 YS2-13j20.p1k chr13 239 141 837926 838024 C 99 98.99 1238 reject_low 4 ALIGNMENT 981 YS2-13j20.q1k chr13 36 1191 165977 167140 F 1156 95.24 1398 accept 0 ALIGNMENT 0 YS2-13j20.p1k chr06 240 830 210696 210695 F 591 0.00 1238 reject_low 2 ALIGNMENT 0 YS2-13j20.p1k chr13 140 62 838025 838024 C 79 0.00 1238 reject_low 4 ALIGNMENT 0 YS2-13j20.p1k chr10 830 242 354158 354157 C 589 0.00 1238 reject_low 5 ALIGNMENT 0 YS2-13j20.p1k chr10 240 830 542959 542958 F 591 0.00 1238 reject_low 7 ALIGNMENT 93 YS2-13j20.p1k chr10 241 143 354157 354255 C 99 97.98 1238 reject_low 5 ALIGNMENT 0 YS2-13j20.p1k chr15 830 249 288183 288182 C 582 0.00 1238 reject_low 1 ALIGNMENT 0 YS2-13j20.p1k chr10 142 62 354256 354255 C 81 0.00 1238 reject_low 5 ALIGNMENT 289 YS2-13j20.p1k chr13 351 35 168682 168999 C 317 97.79 1238|2,0 accept 0 ALIGNMENT 97 YS2-13j20.p1k chr06 140 239 210597 210696 F 100 99.00 1238 reject_low 2 ALIGNMENT 0 YS2-13j20.p1k chr04 830 240 946306 946305 C 591 0.00 1238 reject_low 6 ALIGNMENT 94 YS2-13j20.p1k chr10 143 239 542863 542959 F 97 98.97 1238 reject_low 7 ALIGNMENT 0 YS2-13j20.p1k chr10 62 142 542863 542862 F 81 0.00 1238 reject_low 7 ALIGNMENT 0 YS2-13j20.p1k chr04 142 62 946402 946401 C 81 0.00 1238 reject_low 6 ALIGNMENT 99 YS2-13j20.p1k chr15 248 141 288182 288289 C 108 97.22 1238 reject_low 1 ALIGNMENT 0 YS2-13j20.p1k chr13 830 240 837927 837926 C 591 0.00 1238 reject_low 4 ALIGNMENT 0 YS2-13j20.p1k chr06 62 139 210597 210596 F 78 0.00 1238 reject_low 2 ALIGNMENT 0 YS2-13j20.p1k chr06 830 240 167430 167429 C 591 0.00 1238 reject_low 3 ALIGNMENT 1011 YS2-13j22.p1k chr12 1200 32 760751 761928 C 1169 95.81 1216 accept 0 ALIGNMENT 981 YS2-13j22.q1k chr12 38 1165 756776 757916 F 1128 96.54 1384 accept 0 ALIGNMENT 580 YS2-13j23.p1k chr10 31 999 408074 409039 F 969 88.65 1082 accept 0 ALIGNMENT 0 YS2-13k01.q1k chr01 849 62 206503 206502 C 788 0.00 1329 reject_low 12 ALIGNMENT 0 YS2-13k01.q1k chr01 866 62 205676 205675 C 805 0.00 1329 reject_low 20 ALIGNMENT 0 YS2-13k01.q1k chr08 605 62 527572 527571 C 544 0.00 1329 accept 0 ALIGNMENT 0 YS2-13k01.q1k chr01 849 62 206368 206367 C 788 0.00 1329 reject_low 17 ALIGNMENT 77 YS2-13k01.q1k chr01 958 850 205719 205827 C 109 90.83 1329 reject_low 21 ALIGNMENT 56 YS2-13k01.q1k chr01 958 850 206259 206367 C 109 84.40 1329 reject_low 17 ALIGNMENT 184 YS2-13k01.q1k chr01 701 1254 13090 13622 F 554 80.69 1329 reject_low 3 ALIGNMENT 156 YS2-13k01.q1k chr08 964 701 527171 527431 C 264 87.88 1329 reject_low 4 ALIGNMENT 0 YS2-13k01.q1k chr01 62 700 13090 13089 F 639 0.00 1329 reject_low 3 ALIGNMENT 1074 YS2-13k01.q1k chr08 1258 32 539269 540501 C 1227 96.33 1329 reject_low 2 ALIGNMENT 0 YS2-13k01.q1k chr08 700 62 527432 527431 C 639 0.00 1329 reject_low 4 ALIGNMENT 0 YS2-13k01.q1k chr01 605 62 206927 206926 C 544 0.00 1329 reject_low 21 ALIGNMENT 61 YS2-13k01.q1k chr08 958 867 526907 526998 C 92 89.13 1329 reject_low 16 ALIGNMENT 82 YS2-13k01.q1k chr08 964 867 526496 526593 C 98 94.90 1329 reject_low 10 ALIGNMENT 0 YS2-13k01.q1k chr08 866 62 526594 526593 C 805 0.00 1329 reject_low 10 ALIGNMENT 211 YS2-13k01.q1k chr08 1228 867 525957 526323 C 362 86.74 1329 accept 0 ALIGNMENT 0 YS2-13k01.q1k chr01 849 62 206233 206232 C 788 0.00 1329 reject_low 15 ALIGNMENT 931 YS2-13k01.p1k chr08 68 1111 521527 522575 F 1044 97.32 1179 accept 0 ALIGNMENT 143 YS2-13k01.q1k chr01 701 970 25255 25521 F 270 85.93 1329 reject_low 6 ALIGNMENT 0 YS2-13k01.q1k chr01 62 605 12908 12907 F 544 0.00 1329 reject_low 7 ALIGNMENT 0 YS2-13k01.q1k chr01 700 62 206787 206786 C 639 0.00 1329 reject_low 5 ALIGNMENT 0 YS2-13k01.q1k chr01 62 866 25688 25687 F 805 0.00 1329 reject_low 19 ALIGNMENT 49 YS2-13k01.q1k chr01 970 850 205842 205962 C 121 80.99 1329 reject_low 18 ALIGNMENT 1080 YS2-13k01.q1k chr01 1258 32 218658 219890 C 1227 96.50 1329 reject_low 1 ALIGNMENT 0 YS2-13k01.q1k chr08 849 62 526881 526880 C 788 0.00 1329 reject_low 9 ALIGNMENT 79 YS2-13k01.q1k chr08 964 867 527036 527133 C 98 93.88 1329 reject_low 11 ALIGNMENT 77 YS2-13k01.q1k chr01 850 958 25536 25644 F 109 90.83 1329 reject_low 22 ALIGNMENT 101 YS2-13k01.q1k chr01 737 606 206795 206926 C 132 93.94 1329 reject_low 21 ALIGNMENT 87 YS2-13k01.q1k chr01 606 738 12908 13037 F 133 90.98 1329 reject_low 7 ALIGNMENT 0 YS2-13k01.q1k chr01 62 700 25255 25254 F 639 0.00 1329 reject_low 6 ALIGNMENT 98 YS2-13k01.q1k chr08 736 606 527441 527571 C 131 93.13 1329 accept 0 ALIGNMENT 60 YS2-13k01.q1k chr01 958 852 205989 206095 C 107 85.98 1329 reject_low 14 ALIGNMENT 0 YS2-13k01.q1k chr08 866 62 526729 526728 C 805 0.00 1329 reject_low 13 ALIGNMENT 74 YS2-13k01.q1k chr01 958 850 206394 206502 C 109 89.91 1329 reject_low 12 ALIGNMENT 0 YS2-13k01.q1k chr08 866 62 526459 526458 C 805 0.00 1329 reject_low 8 ALIGNMENT 55 YS2-13k01.q1k chr01 967 850 206115 206232 C 118 83.05 1329 reject_low 15 ALIGNMENT 0 YS2-13k01.q1k chr01 849 62 205963 205962 C 788 0.00 1329 reject_low 18 ALIGNMENT 0 YS2-13k01.q1k chr01 851 62 206096 206095 C 790 0.00 1329 reject_low 14 ALIGNMENT 42 YS2-13k01.q1k chr01 943 867 205599 205675 C 77 85.71 1329 reject_low 20 ALIGNMENT 0 YS2-13k01.q1k chr08 866 62 527134 527133 C 805 0.00 1329 reject_low 11 ALIGNMENT 84 YS2-13k01.q1k chr01 606 738 25073 25202 F 133 90.23 1329 reject_low 22 ALIGNMENT 0 YS2-13k01.q1k chr01 62 605 25073 25072 F 544 0.00 1329 reject_low 22 ALIGNMENT 0 YS2-13k01.q1k chr01 739 849 25203 25535 F 111 0.00 1329 reject_low 22 ALIGNMENT 0 YS2-13k01.q1k chr08 866 62 526999 526998 C 805 0.00 1329 reject_low 16 ALIGNMENT 0 YS2-13k01.q1k chr01 739 848 13037 13036 F 110 0.00 1329 reject_low 7 ALIGNMENT 0 YS2-13k01.q1k chr01 849 738 205828 206794 C 112 0.00 1329 reject_low 21 ALIGNMENT 153 YS2-13k01.q1k chr01 970 701 206517 206786 C 270 86.67 1329 reject_low 5 ALIGNMENT 67 YS2-13k01.q1k chr08 964 867 526631 526728 C 98 89.80 1329 reject_low 13 ALIGNMENT 42 YS2-13k01.q1k chr01 867 943 25688 25764 F 77 85.71 1329 reject_low 19 ALIGNMENT 86 YS2-13k01.q1k chr08 964 850 526766 526880 C 115 92.17 1329 reject_low 9 ALIGNMENT 0 YS2-13k01.q1k chr08 866 737 526324 527440 C 130 0.00 1329 accept 0 ALIGNMENT 88 YS2-13k01.q1k chr08 980 867 526345 526458 C 114 92.98 1329 reject_low 8 ALIGNMENT 482 YS2-13k03.q1k chr12 548 28 464345 464864 C 521 98.66 548 accept 0 ALIGNMENT 481 YS2-13k03.p1k chr12 58 580 455208 455727 F 523 98.47 599 accept 0 ALIGNMENT 482 YS2-13k03.q1k chr12 548 28 455208 455727 C 521 98.66 548 reject_low 1 ALIGNMENT 0 YS2-13k03.p1k chr12 581 599 455727 455726 F 19 0.00 599 accept 0 ALIGNMENT 0 YS2-13k03.p1k chr12 581 599 464864 464863 F 19 0.00 599 reject_low 2 ALIGNMENT 481 YS2-13k03.p1k chr12 58 580 464345 464864 F 523 98.47 599 reject_low 2 ALIGNMENT 272 YS2-13k04.p1k chr01 415 1068 165511 166168 F 654 82.42 1185 reject_low 26 ALIGNMENT 358 YS2-13k04.p1k chr04 415 1057 650765 651408 F 643 86.16 1185 reject_low 15 ALIGNMENT 991 YS2-13k04.q1k chr12 1195 35 984865 986045 C 1161 95.95 1371 accept 0 ALIGNMENT 894 YS2-13k04.p1k chr04 1057 30 871822 872848 C 1028 96.50 1185 reject_low 9 ALIGNMENT 912 YS2-13k04.p1k chr07 30 1057 573672 574698 F 1028 97.18 1185 reject_low 3 ALIGNMENT 0 YS2-13k04.p1k chr04 938 62 992725 992724 C 877 0.00 1185 reject_low 23 ALIGNMENT 0 YS2-13k04.p1k chr07 62 414 567115 567114 F 353 0.00 1185 reject_low 14 ALIGNMENT 0 YS2-13k04.p1k chr04 62 414 991987 991986 F 353 0.00 1185 reject_low 13 ALIGNMENT 897 YS2-13k04.p1k chr06 1057 30 137914 138940 C 1028 96.60 1185 reject_low 7 ALIGNMENT 32 YS2-13k04.p1k chr06 798 741 143869 143927 C 58 89.66 1185 reject_low 27 ALIGNMENT 237 YS2-13k04.p1k chr06 1057 731 143541 143866 C 327 92.05 1185 reject_low 19 ALIGNMENT 0 YS2-13k04.p1k chr05 62 733 135611 135610 F 672 0.00 1185 reject_low 18 ALIGNMENT 111 YS2-13k04.p1k chr04 754 905 987167 987320 F 152 92.11 1185 reject_low 22 ALIGNMENT 249 YS2-13k04.p1k chr04 1057 731 986798 987123 C 327 93.27 1185 reject_low 17 ALIGNMENT 0 YS2-13k04.p1k chr04 797 836 871810 871809 F 40 0.00 1185 reject_low 24 ALIGNMENT 0 YS2-13k04.p1k chr06 730 62 143867 143866 C 669 0.00 1185 reject_low 19 ALIGNMENT 894 YS2-13k04.p1k chr03 1057 30 84816 85842 C 1028 96.50 1185 reject_low 8 ALIGNMENT 27 YS2-13k04.p1k chr06 1011 939 137702 137774 C 73 79.45 1185 reject_low 27 ALIGNMENT 0 YS2-13k04.p1k chr04 730 62 987124 987123 C 669 0.00 1185 reject_low 17 ALIGNMENT 905 YS2-13k04.p1k chr14 30 1057 566960 567987 F 1028 96.98 1185 reject_low 5 ALIGNMENT 0 YS2-13k04.p1k chr04 62 746 871760 871759 F 685 0.00 1185 reject_low 24 ALIGNMENT 906 YS2-13k04.p1k chr04 1065 30 981163 982197 C 1036 96.62 1185 reject_low 2 ALIGNMENT 0 YS2-13k04.p1k chr01 235 414 165319 165510 F 180 0.00 1185 reject_low 26 ALIGNMENT 354 YS2-13k04.p1k chr04 415 1067 991987 992640 F 653 86.22 1185 reject_low 13 ALIGNMENT 26 YS2-13k04.p1k chr04 1011 939 992651 992724 C 73 79.45 1185 reject_low 23 ALIGNMENT 207 YS2-13k04.p1k chr14 1057 741 524736 525053 C 317 89.91 1185 reject_low 20 ALIGNMENT 0 YS2-13k04.p1k chr01 62 178 165263 165262 F 117 0.00 1185 reject_low 26 ALIGNMENT 25 YS2-13k04.p1k chr04 747 796 871760 871810 F 50 88.00 1185 reject_low 24 ALIGNMENT 0 YS2-13k04.p1k chr12 414 62 651476 651475 C 353 0.00 1185 reject_low 16 ALIGNMENT 924 YS2-13k04.p1k chr12 1065 30 941187 942221 C 1036 97.20 1185 reject_low 1 ALIGNMENT 0 YS2-13k04.p1k chr06 740 62 143928 143927 C 679 0.00 1185 reject_low 27 ALIGNMENT 0 YS2-13k04.p1k chr14 414 243 519814 519996 C 172 0.00 1185 reject_low 25 ALIGNMENT 0 YS2-13k04.p1k chr04 62 414 650765 650764 F 353 0.00 1185 reject_low 15 ALIGNMENT 0 YS2-13k04.p1k chr01 62 740 160249 160248 F 679 0.00 1185 reject_low 21 ALIGNMENT 359 YS2-13k04.p1k chr07 415 1048 567115 567749 F 634 86.44 1185 reject_low 14 ALIGNMENT 21 YS2-13k04.p1k chr14 242 179 519997 520061 C 64 79.69 1185 reject_low 25 ALIGNMENT 354 YS2-13k04.p1k chr12 1057 415 650832 651475 C 643 85.85 1185 reject_low 16 ALIGNMENT 854 YS2-13k04.p1k chr15 30 1057 708991 710018 F 1028 95.33 1185 reject_low 12 ALIGNMENT 0 YS2-13k04.p1k chr14 178 62 520062 520061 C 117 0.00 1185 reject_low 25 ALIGNMENT 0 YS2-13k04.p1k chr14 740 62 525054 525053 C 679 0.00 1185 reject_low 20 ALIGNMENT 887 YS2-13k04.p1k chr02 1064 30 29640 30673 C 1035 96.04 1185 reject_low 10 ALIGNMENT 336 YS2-13k04.p1k chr14 1067 415 519160 519813 C 653 84.84 1185 reject_low 25 ALIGNMENT 900 YS2-13k04.p1k chr04 30 1065 518611 519645 F 1036 96.53 1185 reject_low 4 ALIGNMENT 934 YS2-13k04.p1k chr12 30 1182 980664 981814 F 1153 94.62 1185 accept 0 ALIGNMENT 0 YS2-13k04.p1k chr06 802 799 137900 143868 C 4 0.00 1185 reject_low 27 ALIGNMENT 21 YS2-13k04.p1k chr01 179 234 165263 165318 F 56 80.36 1185 reject_low 26 ALIGNMENT 153 YS2-13k04.p1k chr01 741 1048 160249 160560 F 308 85.39 1185 reject_low 21 ALIGNMENT 0 YS2-13k04.p1k chr04 62 753 987167 987166 F 692 0.00 1185 reject_low 22 ALIGNMENT 899 YS2-13k04.p1k chr07 1064 30 811451 812484 C 1035 96.43 1185 reject_low 6 ALIGNMENT 31 YS2-13k04.p1k chr06 851 803 137851 137899 C 49 85.71 1185 reject_low 27 ALIGNMENT 247 YS2-13k04.p1k chr05 734 1057 135611 135933 F 324 93.52 1185 reject_low 18 ALIGNMENT 0 YS2-13k04.p1k chr06 938 852 137775 137850 C 87 0.00 1185 reject_low 27 ALIGNMENT 879 YS2-13k04.p1k chr15 1057 30 970288 971314 C 1028 96.01 1185 reject_low 11 ALIGNMENT 0 YS2-13k05.q1k vc_5 333 92 37 36 C 242 0.00 372 reject_low 7 ALIGNMENT 0 YS2-13k05.q1k vc_1 331 92 2513 2512 C 240 0.00 372 reject_low 2 ALIGNMENT 41 YS2-13k05.q1k vc_4 332 372 5831 5871 F 41 100.00 372 reject_low 4 ALIGNMENT 41 YS2-13k05.q1k vc_1 372 332 2472 2512 C 41 100.00 372 reject_low 2 ALIGNMENT 0 YS2-13k05.q1k vc_4 92 331 5831 5830 F 240 0.00 372 reject_low 4 ALIGNMENT 278 YS2-13k05.p1k chr12 28 336 699585 699892 F 309 98.38 355 accept_chi 0 ALIGNMENT 0 YS2-13k05.q1k vc_7 92 334 13525 13524 F 243 0.00 372 reject_low 6 ALIGNMENT 0 YS2-13k05.q1k vc_3 331 92 2513 2512 C 240 0.00 372 reject_low 3 ALIGNMENT 36 YS2-13k05.q1k vc_5 369 334 1 36 C 36 100.00 372 reject_low 7 ALIGNMENT 39 YS2-13k05.q1k vc_5 372 334 5025 5063 C 39 100.00 372 reject_low 5 ALIGNMENT 38 YS2-13k05.q1k vc_7 335 372 13525 13562 F 38 100.00 372 reject_low 6 ALIGNMENT 41 YS2-13k05.q1k vc_3 372 332 2472 2512 C 41 100.00 372 reject_low 3 ALIGNMENT 0 YS2-13k05.q1k vc_5 333 92 5064 5063 C 242 0.00 372 reject_low 5 ALIGNMENT 0 YS2-13k05.p1k chr12 337 355 699892 699891 F 19 0.00 355 accept_chi 0 ALIGNMENT 252 YS2-13k05.q1k chr12 331 25 699585 699892 C 307 95.11 372 accept_chi 1 ALIGNMENT 0 YS2-13k05.q1k chr12 372 332 699586 699585 C 41 0.00 372 accept_chi 1 ALIGNMENT 0 YS2-13k08.p1k chr09 201 235 23617 23747 F 35 0.00 1232 ambiguous_tel 46 ALIGNMENT 27 YS2-13k08.p1k chr08 196 143 543299 543352 C 54 83.33 1232 reject_low 26 ALIGNMENT 0 YS2-13k08.p1k chr09 62 440 23194 23193 F 379 0.00 1232 ambiguous_tel 44 ALIGNMENT 0 YS2-13k08.p1k chr09 753 850 23946 23945 F 98 0.00 1232 ambiguous_tel 27 ALIGNMENT 26 YS2-13k08.p1k chr15 798 844 28987 29033 F 47 85.11 1232 ambiguous_tel 32 ALIGNMENT 34 YS2-13k08.p1k chr09 111 200 23527 23616 F 90 80.00 1232 ambiguous_tel 45,46 ALIGNMENT 87 YS2-13k08.p1k chr08 1125 988 543227 543368 C 138 88.41 1232 reject_low 11 ALIGNMENT 35 YS2-13k08.p1k chr15 867 956 28948 29037 F 90 80.00 1232 ambiguous_tel 35,40 ALIGNMENT 106 YS2-13k08.q1k chr01 1140 853 27300 27590 C 288 79.51 1384 reject_low 14 ALIGNMENT 220 YS2-13k08.p1k chr09 341 965 23322 23946 F 625 79.68 1232 ambiguous_tel 30 ALIGNMENT 26 YS2-13k08.p1k chr09 150 196 23458 23504 F 47 85.11 1232 ambiguous_tel 42 ALIGNMENT 71 YS2-13k08.p1k chr08 1067 889 543180 543362 C 179 80.45 1232 reject_low 15 ALIGNMENT 0 YS2-13k08.p1k chr15 62 149 29209 29208 F 88 0.00 1232 ambiguous_tel 38 ALIGNMENT 0 YS2-13k08.q1k chr08 165 852 525082 525770 F 688 0.00 1384 reject_low 1 ALIGNMENT 0 YS2-13k08.p1k chr08 561 62 543369 543368 C 500 0.00 1232 reject_low 19 ALIGNMENT 71 YS2-13k08.p1k chr01 845 676 222579 222751 C 170 81.18 1232 reject_low 16 ALIGNMENT 54 YS2-13k08.p1k chr08 322 223 543183 543281 C 100 86.00 1232 reject_low 26 ALIGNMENT 157 YS2-13k08.p1k chr09 236 539 23640 23946 F 304 84.54 1232 ambiguous_tel 45 ALIGNMENT 0 YS2-13k08.q1k chr06 638 62 30430 30429 C 577 0.00 1384 reject_low 2 ALIGNMENT 0 YS2-13k08.p1k chr08 561 536 543369 543182 C 26 0.00 1232 reject_low 17 ALIGNMENT 0 YS2-13k08.p1k chr01 987 62 222758 222757 C 926 0.00 1232 reject_low 5 ALIGNMENT 0 YS2-13k08.q1k chr01 657 731 218257 218330 F 75 0.00 1384 reject_low 5,6,7,9,10,16,18 ALIGNMENT 0 YS2-13k08.p1k chr09 316 553 23284 23321 F 238 0.00 1232 ambiguous_tel 33 ALIGNMENT 26 YS2-13k08.p1k chr15 150 196 29209 29255 F 47 85.11 1232 ambiguous_tel 38 ALIGNMENT 0 YS2-13k08.p1k chr08 888 62 543363 543362 C 827 0.00 1232 reject_low 15 ALIGNMENT 26 YS2-13k08.p1k chr09 151 194 23672 23715 F 44 86.36 1232 ambiguous_tel 43 ALIGNMENT 68 YS2-13k08.p1k chr01 632 463 222579 222751 C 170 80.59 1232 reject_low 16 ALIGNMENT 50 YS2-13k08.p1k chr15 222 326 29272 29376 F 105 82.86 1232 ambiguous_tel 38 ALIGNMENT 0 YS2-13k08.p1k chr09 197 695 23505 23985 F 499 0.00 1232 ambiguous_tel 42 ALIGNMENT 0 YS2-13k08.p1k chr09 316 766 23284 23321 F 451 0.00 1232 ambiguous_tel 36 ALIGNMENT 0 YS2-13k08.p1k chr01 850 318 222577 222576 C 533 0.00 1232 reject_low 18 ALIGNMENT 0 YS2-13k08.p1k chr15 632 647 29034 29058 F 16 0.00 1232 ambiguous_tel 29 ALIGNMENT 0 YS2-13k08.p1k chr09 201 221 23404 23520 F 21 0.00 1232 ambiguous_tel 41 ALIGNMENT 0 YS2-13k08.q1k chr08 140 139 525082 525056 F 0 0.00 1384 reject_low 1 ALIGNMENT 0 YS2-13k08.p1k chr09 62 149 23458 23457 F 88 0.00 1232 ambiguous_tel 42 ALIGNMENT 0 YS2-13k08.p1k chr09 316 340 23284 23321 F 25 0.00 1232 ambiguous_tel 30 ALIGNMENT 87 YS2-13k08.p1k chr01 1125 988 222616 222757 C 138 88.41 1232 reject_low 5 ALIGNMENT 0 YS2-13k08.p1k chr01 462 62 222752 222751 C 401 0.00 1232 reject_low 16 ALIGNMENT 0 YS2-13k08.p1k chr09 201 235 23617 23639 F 35 0.00 1232 ambiguous_tel 45 ALIGNMENT 20 YS2-13k08.q1k chr08 732 754 538942 538964 F 23 95.65 1384 reject_low 11,12,13,15,17,19,24,26 ALIGNMENT 0 YS2-13k08.p1k chr15 62 371 28987 28986 F 310 0.00 1232 ambiguous_tel 28 ALIGNMENT 0 YS2-13k08.q1k chr01 755 896 218353 218352 F 142 0.00 1384 reject_low 5,6,7,9,10,16,18,21 ALIGNMENT 0 YS2-13k08.q1k chr08 657 731 538868 538941 F 75 0.00 1384 reject_low 11,12,13,15,17,19,24,26 ALIGNMENT 43 YS2-13k08.p1k chr09 1073 1189 23308 23434 F 117 82.05 1232 ambiguous_tel 34 ALIGNMENT 0 YS2-13k08.p1k chr08 850 428 543184 543183 C 423 0.00 1232 reject_low 12 ALIGNMENT 20 YS2-13k08.p1k chr01 71 43 222633 222661 C 29 89.66 1232 reject_low 21 ALIGNMENT 0 YS2-13k08.p1k chr01 561 531 222758 222575 C 31 0.00 1232 reject_low 9 ALIGNMENT 50 YS2-13k08.q1k chr08 591 656 538802 538867 F 66 92.42 1384 reject_low 11,12,13,15,17,19,24,26 ALIGNMENT 101 YS2-13k08.p1k chr15 654 1067 28948 29374 F 414 76.09 1232 ambiguous_tel 25 ALIGNMENT 128 YS2-13k08.p1k chr08 535 349 543183 543368 C 187 90.37 1232 reject_low 17 ALIGNMENT 0 YS2-13k08.p1k chr01 222 197 222671 222687 C 26 0.00 1232 reject_low 18 ALIGNMENT 122 YS2-13k08.p1k chr01 743 562 222576 222757 C 182 89.56 1232 reject_low 9,10 ALIGNMENT 0 YS2-13k08.p1k chr01 774 744 222758 222575 C 31 0.00 1232 reject_low 10 ALIGNMENT 0 YS2-13k08.p1k chr09 316 1072 23284 23307 F 757 0.00 1232 ambiguous_tel 34 ALIGNMENT 0 YS2-13k08.p1k chr15 62 584 28987 28986 F 523 0.00 1232 ambiguous_tel 29 ALIGNMENT 20 YS2-13k08.p1k chr09 696 739 23986 24029 F 44 81.82 1232 ambiguous_tel 37,41,42,43,44,45,46 ALIGNMENT 0 YS2-13k08.p1k chr15 327 850 29376 29375 F 524 0.00 1232 ambiguous_tel 38 ALIGNMENT 0 YS2-13k08.p1k chr15 753 850 29376 29375 F 98 0.00 1232 ambiguous_tel 28 ALIGNMENT 70 YS2-13k08.p1k chr08 640 463 543183 543362 C 178 80.90 1232 reject_low 24 ALIGNMENT 259 YS2-13k08.p1k chr15 648 965 29059 29376 F 318 94.34 1232 ambiguous_tel 29 ALIGNMENT 0 YS2-13k08.p1k chr01 850 72 222634 222633 C 779 0.00 1232 reject_low 21 ALIGNMENT 357 YS2-13k08.p1k chr09 648 1125 23308 23789 F 478 92.26 1232 ambiguous_tel 23 ALIGNMENT 0 YS2-13k08.p1k chr01 142 62 222742 222741 C 81 0.00 1232 reject_low 18 ALIGNMENT 54 YS2-13k08.p1k chr01 317 223 222576 222670 C 95 86.32 1232 reject_low 18 ALIGNMENT 0 YS2-13k08.p1k chr09 195 695 23716 23985 F 501 0.00 1232 ambiguous_tel 43 ALIGNMENT 95 YS2-13k08.q1k chr08 847 1191 539108 539461 F 345 76.52 1384 reject_low 11,12,13,15,17,19,24,26 ALIGNMENT 39 YS2-13k08.p1k chr15 980 1075 29073 29169 F 96 80.21 1232 ambiguous_tel 40 ALIGNMENT 211 YS2-13k08.p1k chr15 861 1125 29059 29327 F 265 93.96 1232 ambiguous_tel 32 ALIGNMENT 26 YS2-13k08.p1k chr09 441 528 23194 23283 F 88 77.27 1232 ambiguous_tel 44 ALIGNMENT 0 YS2-13k08.p1k chr08 348 62 543369 543368 C 287 0.00 1232 reject_low 17 ALIGNMENT 0 YS2-13k08.p1k chr08 850 72 543245 543244 C 779 0.00 1232 reject_low 13 ALIGNMENT 233 YS2-13k08.p1k chr09 861 1188 23308 23646 F 328 91.77 1232 ambiguous_tel 22 ALIGNMENT 0 YS2-13k08.p1k chr09 430 695 23945 23985 F 266 0.00 1232 ambiguous_tel 46 ALIGNMENT 0 YS2-13k08.q1k chr01 62 852 203773 203772 F 791 0.00 1384 reject_low 8 ALIGNMENT 0 YS2-13k08.p1k chr09 316 979 23284 23321 F 664 0.00 1232 ambiguous_tel 39 ALIGNMENT 188 YS2-13k08.p1k chr09 554 1125 23322 23897 F 572 78.85 1232 ambiguous_tel 33 ALIGNMENT 0 YS2-13k08.p1k chr09 740 850 24029 24028 F 111 0.00 1232 ambiguous_tel 37,41,42,43,44,45,46 ALIGNMENT 0 YS2-13k08.q1k chr06 796 772 30200 30296 C 25 0.00 1384 reject_low 2 ALIGNMENT 22 YS2-13k08.q1k chr08 140 164 525057 525081 F 25 96.00 1384 reject_low 1 ALIGNMENT 0 YS2-13k08.p1k chr15 62 653 28948 28947 F 592 0.00 1232 ambiguous_tel 25 ALIGNMENT 0 YS2-13k08.q1k chr01 852 62 27591 27590 C 791 0.00 1384 reject_low 14 ALIGNMENT 202 YS2-13k08.p1k chr09 236 752 23427 23946 F 517 80.85 1232 ambiguous_tel 27 ALIGNMENT 0 YS2-13k08.p1k chr09 316 860 23284 23307 F 545 0.00 1232 ambiguous_tel 22 ALIGNMENT 73 YS2-13k08.p1k chr08 427 228 543183 543384 C 200 80.00 1232 reject_low 12 ALIGNMENT 47 YS2-13k08.p1k chr09 115 326 23744 23946 F 212 77.36 1232 ambiguous_tel 37 ALIGNMENT 91 YS2-13k08.p1k chr09 767 1131 23322 23688 F 365 76.16 1232 ambiguous_tel 36 ALIGNMENT 0 YS2-13k08.q1k chr08 755 846 538965 539107 F 92 0.00 1384 reject_low 11,12,13,15,17,19,24,26 ALIGNMENT 26 YS2-13k08.p1k chr15 585 631 28987 29033 F 47 85.11 1232 ambiguous_tel 29 ALIGNMENT 0 YS2-13k08.p1k chr09 327 695 23947 23985 F 369 0.00 1232 ambiguous_tel 37 ALIGNMENT 0 YS2-13k08.q1k chr08 62 182 525050 525049 F 121 0.00 1384 accept 0 ALIGNMENT 0 YS2-13k08.p1k chr15 197 221 29256 29271 F 25 0.00 1232 ambiguous_tel 38 ALIGNMENT 28 YS2-13k08.p1k chr09 63 200 23265 23403 F 138 74.64 1232 ambiguous_tel 27,41 ALIGNMENT 0 YS2-13k08.p1k chr08 142 62 543353 543352 C 81 0.00 1232 reject_low 26 ALIGNMENT 0 YS2-13k08.q1k chr01 62 590 218191 218190 F 529 0.00 1384 reject_low 5,6,7,9,10,16,18 ALIGNMENT 50 YS2-13k08.q1k chr01 591 656 218191 218256 F 66 92.42 1384 reject_low 5,6,7,9,10,16,18 ALIGNMENT 0 YS2-13k08.p1k chr08 462 62 543363 543362 C 401 0.00 1232 reject_low 24 ALIGNMENT 448 YS2-13k08.p1k chr15 28 539 28865 29376 F 512 96.48 1232 ambiguous_tel 4 ALIGNMENT 0 YS2-13k08.p1k chr09 643 695 23945 23985 F 53 0.00 1232 ambiguous_tel 41 ALIGNMENT 0 YS2-13k08.p1k chr09 62 114 23744 23743 F 53 0.00 1232 ambiguous_tel 37 ALIGNMENT 0 YS2-13k08.p1k chr09 62 110 23527 23526 F 49 0.00 1232 ambiguous_tel 45,46 ALIGNMENT 0 YS2-13k08.p1k chr09 201 235 23404 23426 F 35 0.00 1232 ambiguous_tel 27 ALIGNMENT 0 YS2-13k08.p1k chr01 850 420 222580 222579 C 431 0.00 1232 reject_low 6 ALIGNMENT 0 YS2-13k08.q1k chr01 62 731 218331 218330 F 670 0.00 1384 reject_low 21 ALIGNMENT 0 YS2-13k08.p1k chr01 561 62 222758 222757 C 500 0.00 1232 reject_low 10 ALIGNMENT 28 YS2-13k08.p1k chr09 180 315 23147 23283 F 136 75.74 1232 ambiguous_tel 20,22,23,30,33,34,36,39 ALIGNMENT 0 YS2-13k08.p1k chr09 316 647 23284 23307 F 332 0.00 1232 ambiguous_tel 23 ALIGNMENT 0 YS2-13k08.p1k chr08 850 749 543184 543183 C 102 0.00 1232 reject_low 17 ALIGNMENT 67 YS2-13k08.q1k chr06 904 797 30089 30199 C 108 88.89 1384 reject_low 2 ALIGNMENT 106 YS2-13k08.q1k chr08 25 139 524967 525081 F 115 97.39 1384 reject_low 1 ALIGNMENT 0 YS2-13k08.p1k chr01 675 633 222752 222578 C 43 0.00 1232 reject_low 16 ALIGNMENT 26 YS2-13k08.p1k chr15 372 418 28987 29033 F 47 85.11 1232 ambiguous_tel 28 ALIGNMENT 73 YS2-13k08.p1k chr08 853 676 543183 543362 C 178 81.46 1232 reject_low 24 ALIGNMENT 0 YS2-13k08.p1k chr01 227 62 222774 222773 C 166 0.00 1232 reject_low 6 ALIGNMENT 410 YS2-13k08.p1k chr09 435 1067 23308 23944 F 633 88.94 1232 ambiguous_tel 20 ALIGNMENT 0 YS2-13k08.p1k chr08 850 323 543184 543183 C 528 0.00 1232 reject_low 26 ALIGNMENT 0 YS2-13k08.p1k chr15 845 860 29034 29058 F 16 0.00 1232 ambiguous_tel 32 ALIGNMENT 40 YS2-13k08.p1k chr15 1073 1189 29059 29185 F 117 81.20 1232 ambiguous_tel 35 ALIGNMENT 20 YS2-13k08.p1k chr08 71 43 543244 543272 C 29 89.66 1232 reject_low 13 ALIGNMENT 27 YS2-13k08.p1k chr01 196 143 222688 222741 C 54 83.33 1232 reject_low 18 ALIGNMENT 0 YS2-13k08.p1k chr08 227 62 543385 543384 C 166 0.00 1232 reject_low 12 ALIGNMENT 129 YS2-13k08.p1k chr01 956 775 222576 222757 C 182 90.66 1232 reject_low 10 ALIGNMENT 151 YS2-13k08.q1k chr01 853 1138 203773 204061 F 286 84.27 1384 reject_low 8 ALIGNMENT 0 YS2-13k08.p1k chr09 529 695 23284 23985 F 167 0.00 1232 ambiguous_tel 44 ALIGNMENT 0 YS2-13k08.p1k chr09 62 179 23147 23146 F 118 0.00 1232 ambiguous_tel 20,22,23,30,33,34,36,39 ALIGNMENT 579 YS2-13k08.p1k chr09 28 855 23112 23944 F 828 90.94 1232 ambiguous_tel 3 ALIGNMENT 0 YS2-13k08.p1k chr15 62 1010 28987 28986 F 949 0.00 1232 ambiguous_tel 31 ALIGNMENT 0 YS2-13k08.p1k chr15 957 1072 29038 29058 F 116 0.00 1232 ambiguous_tel 35 ALIGNMENT 0 YS2-13k08.p1k chr08 222 197 543282 543298 C 26 0.00 1232 reject_low 26 ALIGNMENT 98 YS2-13k08.q1k chr08 853 1191 525771 526119 F 339 76.99 1384 accept 0 reject_low 1 ALIGNMENT 129 YS2-13k08.p1k chr01 530 349 222576 222757 C 182 90.66 1232 reject_low 9 ALIGNMENT 0 YS2-13k08.p1k chr01 850 744 222577 222576 C 107 0.00 1232 reject_low 9 ALIGNMENT 204 YS2-13k08.p1k chr09 222 642 23521 23944 F 421 83.61 1232 ambiguous_tel 41 ALIGNMENT 0 YS2-13k08.q1k chr08 656 852 525523 525770 F 197 0.00 1384 accept 0 ALIGNMENT 0 YS2-13k08.p1k chr15 419 434 29034 29058 F 16 0.00 1232 ambiguous_tel 28 ALIGNMENT 72 YS2-13k08.p1k chr09 236 429 23748 23944 F 194 79.90 1232 ambiguous_tel 46 ALIGNMENT 0 YS2-13k08.p1k chr15 62 866 28948 28947 F 805 0.00 1232 ambiguous_tel 35,40 ALIGNMENT 247 YS2-13k08.p1k chr15 435 752 29059 29376 F 318 93.08 1232 ambiguous_tel 28 ALIGNMENT 68 YS2-13k08.p1k chr01 1067 889 222569 222751 C 179 79.89 1232 reject_low 7 ALIGNMENT 0 YS2-13k08.p1k chr08 987 62 543369 543368 C 926 0.00 1232 reject_low 11 ALIGNMENT 111 YS2-13k08.q1k chr06 771 639 30297 30429 C 133 95.49 1384 reject_low 2 ALIGNMENT 0 YS2-13k08.p1k chr09 316 434 23284 23307 F 119 0.00 1232 ambiguous_tel 20 ALIGNMENT 0 YS2-13k08.p1k chr08 774 749 543369 543182 C 26 0.00 1232 reject_low 19 ALIGNMENT 384 YS2-13k08.q1k chr08 183 655 525050 525522 F 473 94.50 1384 accept 0 ALIGNMENT 0 YS2-13k08.p1k chr15 62 797 28987 28986 F 736 0.00 1232 ambiguous_tel 32 ALIGNMENT 0 YS2-13k08.p1k chr15 957 979 29038 29072 F 23 0.00 1232 ambiguous_tel 40 ALIGNMENT 0 YS2-13k08.q1k chr08 62 590 538802 538801 F 529 0.00 1384 reject_low 11,12,13,15,17,19,24,26 ALIGNMENT 24 YS2-13k08.p1k chr15 1011 1056 28987 29033 F 46 84.78 1232 ambiguous_tel 31 ALIGNMENT 36 YS2-13k08.p1k chr09 980 1075 23322 23418 F 96 79.17 1232 ambiguous_tel 39 ALIGNMENT 0 YS2-13k08.p1k chr09 62 150 23672 23671 F 89 0.00 1232 ambiguous_tel 43 ALIGNMENT 71 YS2-13k08.p1k chr01 419 228 222579 222773 C 192 79.69 1232 reject_low 6 ALIGNMENT 128 YS2-13k08.p1k chr08 961 775 543183 543368 C 187 90.37 1232 reject_low 19 ALIGNMENT 0 YS2-13k08.p1k chr09 540 695 23947 23985 F 156 0.00 1232 ambiguous_tel 45 ALIGNMENT 122 YS2-13k08.p1k chr08 748 562 543183 543368 C 187 89.30 1232 reject_low 17,19 ALIGNMENT 0 YS2-13k08.p1k chr01 348 62 222758 222757 C 287 0.00 1232 reject_low 9 ALIGNMENT 0 YS2-13k08.p1k chr01 888 62 222752 222751 C 827 0.00 1232 reject_low 7 ALIGNMENT 0 YS2-13k08.p1k chr15 540 850 29376 29375 F 311 0.00 1232 ambiguous_tel 4 ALIGNMENT 20 YS2-13k08.q1k chr01 732 754 218331 218353 F 23 95.65 1384 reject_low 5,6,7,9,10,16,18,21 ALIGNMENT 0 YS2-13k08.p1k chr08 675 641 543363 543182 C 35 0.00 1232 reject_low 24 ALIGNMENT 991 YS2-13k09.q1k chr14 34 1166 259992 261119 F 1133 96.91 1378 accept 0 ALIGNMENT 955 YS2-13k09.p1k chr14 1133 58 262982 264072 C 1076 97.49 1190 accept 0 ALIGNMENT 1000 YS2-13k10.p1k chr15 1238 28 649130 650358 C 1211 95.95 1239 accept 0 ALIGNMENT 939 YS2-13k10.q1k chr15 32 1069 645773 646826 F 1038 97.98 1365 accept 0 ALIGNMENT 0 YS2-13k12.p1k chr06 89 62 210696 210695 C 28 0.00 1257 reject_low 4 ALIGNMENT 0 YS2-13k12.p1k chr10 878 186 542864 542863 C 693 0.00 1257 reject_low 6 ALIGNMENT 0 YS2-13k12.p1k chr10 62 89 354160 354159 F 28 0.00 1257 reject_low 7 ALIGNMENT 970 YS2-13k12.q1k chr15 1231 37 291464 292673 C 1195 94.48 1414 accept 0 ALIGNMENT 0 YS2-13k12.p1k chr06 62 89 167430 167429 F 28 0.00 1257 reject_low 3 ALIGNMENT 94 YS2-13k12.p1k chr06 90 186 167430 167526 F 97 98.97 1257 reject_low 3 ALIGNMENT 0 YS2-13k12.p1k chr04 186 878 946401 946400 F 693 0.00 1257 reject_low 5 ALIGNMENT 0 YS2-13k12.p1k chr06 878 187 210600 210599 C 692 0.00 1257 reject_low 4 ALIGNMENT 93 YS2-13k12.p1k chr10 185 90 542863 542958 C 96 98.96 1257 reject_low 6 ALIGNMENT 0 YS2-13k12.p1k chr13 194 878 838031 838030 F 685 0.00 1257 reject_low 2 ALIGNMENT 0 YS2-13k12.p1k chr06 187 878 167526 167525 F 692 0.00 1257 reject_low 3 ALIGNMENT 93 YS2-13k12.p1k chr04 90 185 946306 946401 F 96 98.96 1257 reject_low 5 ALIGNMENT 0 YS2-13k12.p1k chr04 62 89 946306 946305 F 28 0.00 1257 reject_low 5 ALIGNMENT 97 YS2-13k12.p1k chr13 90 193 837927 838031 F 104 98.08 1257 reject_low 2 ALIGNMENT 0 YS2-13k12.p1k chr13 187 878 168891 168890 F 692 0.00 1257 reject_low 1 ALIGNMENT 1003 YS2-13k12.p1k chr15 37 1256 288139 289367 F 1220 95.00 1257 accept 0 ALIGNMENT 90 YS2-13k12.p1k chr10 90 185 354160 354255 F 96 97.92 1257 reject_low 7 ALIGNMENT 0 YS2-13k12.p1k chr13 62 79 168785 168784 F 18 0.00 1257 reject_low 1 ALIGNMENT 0 YS2-13k12.p1k chr10 89 62 542959 542958 C 28 0.00 1257 reject_low 6 ALIGNMENT 0 YS2-13k12.p1k chr13 62 89 837927 837926 F 28 0.00 1257 reject_low 2 ALIGNMENT 94 YS2-13k12.p1k chr06 186 90 210599 210695 C 97 98.97 1257 reject_low 4 ALIGNMENT 95 YS2-13k12.p1k chr13 80 186 168785 168891 F 107 96.26 1257 reject_low 1 ALIGNMENT 0 YS2-13k12.p1k chr10 186 878 354255 354254 F 693 0.00 1257 reject_low 7 ALIGNMENT 895 YS2-13k13.q1k chr13 1086 31 398042 399115 C 1056 96.78 1270 accept 0 ALIGNMENT 1017 YS2-13k13.p1k chr13 29 1185 395207 396373 F 1157 96.46 1190 accept 0 ALIGNMENT 269 YS2-13k15.p1k chr13 75 771 395258 395953 F 697 80.63 1192 accept_chi 1 ALIGNMENT 1024 YS2-13k15.q1k chr13 38 1229 575493 576696 F 1192 96.73 1342 accept_chi 0 ALIGNMENT 458 YS2-13k16.q1k chrm 33 991 5389 6380 F 959 92.81 1409 accept 0 ALIGNMENT 0 YS2-13k16.q1k chrm 833 832 6190 6224 F 0 0.00 1409 reject_low 1 ALIGNMENT 97 YS2-13k16.q1k chrm 685 836 6042 6193 F 152 90.79 1409|0,4 reject_low 1 ALIGNMENT 0 YS2-13k16.q1k chrm 790 62 83386 83385 C 729 0.00 1409 reject_low 2 ALIGNMENT 0 YS2-13k16.q1k chrm 62 684 6042 6041 F 623 0.00 1409 reject_low 1 ALIGNMENT 61 YS2-13k16.q1k chrm 828 1059 6220 6449 F 232 87.93 1409|5,0 reject_low 1 ALIGNMENT 30 YS2-13k16.q1k chrm 829 791 83348 83385 C 39 94.87 1409 reject_low 2 ALIGNMENT 1107 YS2-13k17.q1k chr12 27 1303 453116 454400 F 1277 96.08 1352 accept 0 ALIGNMENT 995 YS2-13k17.p1k chr12 1159 28 463150 464278 C 1132 96.73 1159 accept 1 ALIGNMENT 1107 YS2-13k17.q1k chr12 27 1303 462253 463537 F 1277 96.08 1352 accept 1 ALIGNMENT 995 YS2-13k17.p1k chr12 1159 28 454013 455141 C 1132 96.73 1159 accept 0 ALIGNMENT 0 YS2-13k18.q1k vc_4 62 520 5832 5831 F 459 0.00 560 reject_low 4 ALIGNMENT 40 YS2-13k18.q1k vc_4 521 560 5832 5871 F 40 100.00 560 reject_low 4 ALIGNMENT 0 YS2-13k18.q1k vc_3 520 62 2512 2511 C 459 0.00 560 reject_low 3 ALIGNMENT 0 YS2-13k18.q1k vc_5 521 62 37 36 C 460 0.00 560 reject_low 7 ALIGNMENT 36 YS2-13k18.q1k vc_5 557 522 1 36 C 36 100.00 560 reject_low 7 ALIGNMENT 38 YS2-13k18.q1k vc_7 523 560 13525 13562 F 38 100.00 560 reject_low 6 ALIGNMENT 39 YS2-13k18.q1k vc_5 560 522 5025 5063 C 39 100.00 560 reject_low 5 ALIGNMENT 467 YS2-13k18.p1k chr16 23 510 477727 478215 F 488 98.98 528 accept 0 ALIGNMENT 463 YS2-13k18.q1k chr16 520 43 477731 478208 C 478 99.37 560 accept 0 ALIGNMENT 0 YS2-13k18.p1k chr16 511 528 478215 478214 F 18 0.00 528 accept 0 ALIGNMENT 40 YS2-13k18.q1k vc_2 560 521 2105 2144 C 40 100.00 560 reject_low 2 ALIGNMENT 40 YS2-13k18.q1k vc_3 560 521 2472 2511 C 40 100.00 560 reject_low 3 ALIGNMENT 0 YS2-13k18.q1k vc_7 62 522 13525 13524 F 461 0.00 560 reject_low 6 ALIGNMENT 0 YS2-13k18.q1k vc_1 520 62 2512 2511 C 459 0.00 560 reject_low 1 ALIGNMENT 0 YS2-13k18.q1k vc_5 521 62 5064 5063 C 460 0.00 560 reject_low 5 ALIGNMENT 0 YS2-13k18.q1k vc_2 520 62 2145 2144 C 459 0.00 560 reject_low 2 ALIGNMENT 40 YS2-13k18.q1k vc_1 560 521 2472 2511 C 40 100.00 560 reject_low 1 ALIGNMENT 0 YS2-13k18.q1k chr16 560 521 477732 477731 C 40 0.00 560 accept 0 ALIGNMENT 920 YS2-13k19.q1k chr12 1165 31 711378 712530 C 1135 95.07 1270 accept 0 ALIGNMENT 919 YS2-13k19.p1k chr12 61 1181 706958 708078 F 1121 95.45 1192 accept 0 ALIGNMENT 808 YS2-13k20.p1k chr12 244 1307 453001 454075 F 1064 92.86 1388 accept 0 ALIGNMENT 930 YS2-13k20.q1k chr12 1023 31 457473 458473 C 993 98.49 1285 accept 0 ALIGNMENT 808 YS2-13k20.p1k chr12 244 1307 462138 463212 F 1064 92.86 1388 accept 1 ALIGNMENT 930 YS2-13k20.q1k chr12 1023 31 466610 467610 C 993 98.49 1285 accept 1 ALIGNMENT 0 YS2-13k21.q1k chr04 62 83 1201735 1201734 F 22 0.00 1281 reject_low 12 ALIGNMENT 0 YS2-13k21.q1k chr07 171 877 122355 122354 F 707 0.00 1281 reject_low 10 ALIGNMENT 77 YS2-13k21.q1k chr09 169 79 300219 300308 C 91 95.60 1281 reject_low 7 ALIGNMENT 0 YS2-13k21.q1k chr05 877 170 135418 135417 C 708 0.00 1281 reject_low 5 ALIGNMENT 82 YS2-13k21.q1k chr07 88 170 876398 876480 F 83 100.00 1281 reject_low 8 ALIGNMENT 0 YS2-13k21.q1k chr10 162 877 414953 414952 F 716 0.00 1281 reject_low 4 ALIGNMENT 0 YS2-13k21.q1k chr07 877 172 185711 185710 C 706 0.00 1281 reject_low 2 ALIGNMENT 75 YS2-13k21.q1k chr04 84 161 1201735 1201812 F 78 98.72 1281 reject_low 12 ALIGNMENT 87 YS2-13k21.q1k chr07 171 76 185710 185805 C 96 96.88 1281 reject_low 2 ALIGNMENT 0 YS2-13k21.q1k chr07 62 87 876398 876397 F 26 0.00 1281 reject_low 8 ALIGNMENT 0 YS2-13k21.q1k chr09 877 170 300220 300219 C 708 0.00 1281 reject_low 7 ALIGNMENT 0 YS2-13k21.q1k chr09 78 62 300309 300308 C 17 0.00 1281 reject_low 7 ALIGNMENT 83 YS2-13k21.q1k chr04 170 79 1352447 1352538 C 92 96.74 1281 reject_low 6 ALIGNMENT 0 YS2-13k21.q1k chr13 87 62 480694 480693 C 26 0.00 1281 reject_low 11 ALIGNMENT 87 YS2-13k21.q1k chr03 174 84 151268 151358 C 91 98.90 1281 reject_low 1 ALIGNMENT 69 YS2-13k21.q1k chr06 170 89 226666 226747 C 82 96.34 1281 reject_low 13 ALIGNMENT 77 YS2-13k21.q1k chr13 170 88 480612 480693 C 83 98.80 1281 reject_low 11 ALIGNMENT 0 YS2-13k21.q1k chr03 83 62 151359 151358 C 22 0.00 1281 reject_low 1 ALIGNMENT 0 YS2-13k21.q1k chr13 877 171 480613 480612 C 707 0.00 1281 reject_low 11 ALIGNMENT 85 YS2-13k21.q1k chr05 169 79 135417 135507 C 91 97.80 1281 reject_low 5 ALIGNMENT 87 YS2-13k21.q1k chr05 169 79 435740 435831 C 91 98.90 1281 reject_low 3 ALIGNMENT 0 YS2-13k21.q1k chr05 877 170 435741 435740 C 708 0.00 1281 reject_low 3 ALIGNMENT 0 YS2-13k21.q1k chr04 877 171 1352448 1352447 C 707 0.00 1281 reject_low 6 ALIGNMENT 0 YS2-13k21.q1k chr06 88 62 226748 226747 C 27 0.00 1281 reject_low 13 ALIGNMENT 0 YS2-13k21.q1k chr07 171 877 876480 876479 F 707 0.00 1281 reject_low 8 ALIGNMENT 0 YS2-13k21.q1k chr04 78 62 1352539 1352538 C 17 0.00 1281 reject_low 6 ALIGNMENT 78 YS2-13k21.q1k chr07 88 170 122272 122355 F 83 98.80 1281 reject_low 10 ALIGNMENT 950 YS2-13k21.p1k chr16 1112 36 584758 585832 C 1077 96.84 1164 accept 0 ALIGNMENT 0 YS2-13k21.q1k chr11 62 87 202644 202643 F 26 0.00 1281 reject_low 9 ALIGNMENT 1005 YS2-13k21.q1k chr16 29 1191 581998 583175 F 1163 96.30 1281 accept 0 ALIGNMENT 0 YS2-13k21.q1k chr11 170 877 202725 202724 F 708 0.00 1281 reject_low 9 ALIGNMENT 0 YS2-13k21.q1k chr05 78 62 435832 435831 C 17 0.00 1281 reject_low 3 ALIGNMENT 0 YS2-13k21.q1k chr05 78 62 135508 135507 C 17 0.00 1281 reject_low 5 ALIGNMENT 0 YS2-13k21.q1k chr03 877 175 151269 151268 C 703 0.00 1281 reject_low 1 ALIGNMENT 0 YS2-13k21.q1k chr07 62 87 122272 122271 F 26 0.00 1281 reject_low 10 ALIGNMENT 81 YS2-13k21.q1k chr11 88 169 202644 202725 F 82 100.00 1281 reject_low 9 ALIGNMENT 0 YS2-13k21.q1k chr06 877 171 226667 226666 C 707 0.00 1281 reject_low 13 ALIGNMENT 0 YS2-13k21.q1k chr04 162 877 1201812 1201811 F 716 0.00 1281 reject_low 12 ALIGNMENT 77 YS2-13k21.q1k chr10 76 161 414868 414953 F 86 96.51 1281 reject_low 4 ALIGNMENT 986 YS2-13k22.q1k chr13 1164 33 795735 796873 C 1132 96.11 1345 accept 0 ALIGNMENT 464 YS2-13k22.p1k chr13 29 738 790995 791693 F 710 90.70 1066 accept 0 ALIGNMENT 106 YS2-13k23.p1k chr04 188 64 246753 246879 C 125 96.80 207 accept 0 ALIGNMENT 0 YS2-13k23.p1k chr04 207 189 246754 246753 C 19 0.00 207 accept 0 ALIGNMENT 1022 YS2-13k24.p1k chr15 22 1212 693029 694224 F 1191 96.39 1212 accept 0 ALIGNMENT 992 YS2-13k24.q1k chr15 1127 26 695226 696336 C 1102 97.64 1313 accept 0 ALIGNMENT 22 YS2-13l01.q1k chr08 581 552 420592 420621 C 30 96.67 1401 reject_low 1 ALIGNMENT 0 YS2-13l01.q1k chr08 551 62 420622 420621 C 490 0.00 1401 reject_low 1 ALIGNMENT 1009 YS2-13l01.q1k chr04 1279 38 585830 587084 C 1242 95.33 1401 accept 0 ALIGNMENT 0 YS2-13l01.q1k chr08 893 582 420593 420592 C 312 0.00 1401 reject_low 1 ALIGNMENT 0 YS2-13l02.p1k chr04 604 621 50621 50620 F 18 0.00 621 accept_chi 1 ALIGNMENT 0 YS2-13l02.q1k vc_2 609 62 2146 2145 C 548 0.00 650 reject_low 3 ALIGNMENT 41 YS2-13l02.q1k vc_2 650 610 2105 2145 C 41 100.00 650 reject_low 3 ALIGNMENT 0 YS2-13l02.q1k vc_3 609 62 2513 2512 C 548 0.00 650 reject_low 4 ALIGNMENT 545 YS2-13l02.p1k chr04 29 603 50046 50621 F 575 99.83 621 accept_chi 1 ALIGNMENT 0 YS2-13l02.q1k vc_4 62 609 5831 5830 F 548 0.00 650 reject_low 5 ALIGNMENT 41 YS2-13l02.q1k vc_4 610 650 5831 5871 F 41 100.00 650 reject_low 5 ALIGNMENT 0 YS2-13l02.q1k vc_5 611 62 37 36 C 550 0.00 650 reject_low 8 ALIGNMENT 0 YS2-13l02.q1k chr04 650 610 50047 50046 C 41 0.00 650 accept_chi 0 ALIGNMENT 0 YS2-13l02.q1k vc_1 609 62 2513 2512 C 548 0.00 650 reject_low 2 ALIGNMENT 0 YS2-13l02.q1k vc_5 611 62 5064 5063 C 550 0.00 650 reject_low 6 ALIGNMENT 0 YS2-13l02.q1k vc_7 62 612 13525 13524 F 551 0.00 650 reject_low 7 ALIGNMENT 39 YS2-13l02.q1k vc_5 650 612 5025 5063 C 39 100.00 650 reject_low 6 ALIGNMENT 36 YS2-13l02.q1k vc_5 647 612 1 36 C 36 100.00 650 reject_low 8 ALIGNMENT 41 YS2-13l02.q1k vc_1 650 610 2472 2512 C 41 100.00 650 reject_low 2 ALIGNMENT 550 YS2-13l02.q1k chr04 609 34 50046 50621 C 576 100.00 650 accept_chi 0 ALIGNMENT 41 YS2-13l02.q1k vc_3 650 610 2472 2512 C 41 100.00 650 reject_low 4 ALIGNMENT 38 YS2-13l02.q1k vc_7 613 650 13525 13562 F 38 100.00 650 reject_low 7 ALIGNMENT 1018 YS2-13l04.p1k chr08 29 1186 117471 118620 F 1158 96.98 1196 accept 0 ALIGNMENT 1037 YS2-13l04.q1k chr08 1246 28 117829 119062 C 1219 96.31 1370 accept 0 ALIGNMENT 1032 YS2-13l05.p1k chr02 29 1256 239319 240547 F 1228 95.03 1264 accept 0 ALIGNMENT 953 YS2-13l05.q1k chr02 1151 34 241094 242225 C 1118 96.06 1376 accept 0 ALIGNMENT 242 YS2-13l06.q1k chr12 34 281 467081 467327 F 248 99.60 322 reject_low 2 ALIGNMENT 0 YS2-13l06.q1k vc_7 62 284 13525 13524 F 223 0.00 322 reject_low 8 ALIGNMENT 41 YS2-13l06.q1k vc_4 282 322 5831 5871 F 41 100.00 322 reject_low 6 ALIGNMENT 0 YS2-13l06.q1k vc_1 281 62 2513 2512 C 220 0.00 322 reject_low 3 ALIGNMENT 246 YS2-13l06.p1k chr12 273 27 457944 458190 C 247 100.00 291 reject_low 1 ALIGNMENT 0 YS2-13l06.q1k chr12 282 322 458190 458189 F 41 0.00 322 accept 0 ALIGNMENT 41 YS2-13l06.q1k vc_2 322 282 2105 2145 C 41 100.00 322 reject_low 4 ALIGNMENT 0 YS2-13l06.q1k vc_4 62 281 5831 5830 F 220 0.00 322 reject_low 6 ALIGNMENT 246 YS2-13l06.p1k chr12 273 27 467081 467327 C 247 100.00 291 accept 0 ALIGNMENT 39 YS2-13l06.q1k vc_5 322 284 5025 5063 C 39 100.00 322 reject_low 7 ALIGNMENT 0 YS2-13l06.p1k chr12 291 274 457945 457944 C 18 0.00 291 reject_low 1 ALIGNMENT 38 YS2-13l06.q1k vc_7 285 322 13525 13562 F 38 100.00 322 reject_low 8 ALIGNMENT 41 YS2-13l06.q1k vc_3 322 282 2472 2512 C 41 100.00 322 reject_low 5 ALIGNMENT 0 YS2-13l06.p1k chr12 291 274 467082 467081 C 18 0.00 291 accept 0 ALIGNMENT 0 YS2-13l06.q1k vc_5 283 62 5064 5063 C 222 0.00 322 reject_low 7 ALIGNMENT 0 YS2-13l06.q1k vc_5 283 62 37 36 C 222 0.00 322 reject_low 9 ALIGNMENT 0 YS2-13l06.q1k chr12 282 322 467327 467326 F 41 0.00 322 reject_low 2 ALIGNMENT 0 YS2-13l06.q1k vc_3 281 62 2513 2512 C 220 0.00 322 reject_low 5 ALIGNMENT 41 YS2-13l06.q1k vc_1 322 282 2472 2512 C 41 100.00 322 reject_low 3 ALIGNMENT 0 YS2-13l06.q1k vc_2 281 62 2146 2145 C 220 0.00 322 reject_low 4 ALIGNMENT 36 YS2-13l06.q1k vc_5 319 284 1 36 C 36 100.00 322 reject_low 9 ALIGNMENT 242 YS2-13l06.q1k chr12 34 281 457944 458190 F 248 99.60 322 accept 0 ALIGNMENT 931 YS2-13l07.q1k chr09 28 1015 303325 304313 F 988 99.19 1331 accept_chi 0 ALIGNMENT 898 YS2-13l07.p1k chr09 1016 31 303325 304313 C 986 98.07 1205 accept_chi 1 ALIGNMENT 0 YS2-13l08.q1k vc_5 262 62 5064 5063 C 201 0.00 301 reject_low 6 ALIGNMENT 0 YS2-13l08.q1k vc_5 262 62 37 36 C 201 0.00 301 reject_low 8 ALIGNMENT 40 YS2-13l08.q1k vc_2 301 262 2105 2144 C 40 100.00 301 reject_low 3 ALIGNMENT 0 YS2-13l08.q1k vc_3 261 62 2512 2511 C 200 0.00 301 reject_low 4 ALIGNMENT 0 YS2-13l08.q1k vc_2 261 62 2145 2144 C 200 0.00 301 reject_low 3 ALIGNMENT 40 YS2-13l08.q1k vc_3 301 262 2472 2511 C 40 100.00 301 reject_low 4 ALIGNMENT 39 YS2-13l08.q1k vc_5 301 263 5025 5063 C 39 100.00 301 reject_low 6 ALIGNMENT 0 YS2-13l08.q1k chr01 262 301 134861 134860 F 40 0.00 301 accept_chi 0 ALIGNMENT 0 YS2-13l08.q1k vc_4 62 261 5832 5831 F 200 0.00 301 reject_low 5 ALIGNMENT 0 YS2-13l08.q1k vc_1 261 62 2512 2511 C 200 0.00 301 reject_low 2 ALIGNMENT 200 YS2-13l08.p1k chr01 248 25 134637 134861 C 224 98.21 266 accept_chi 1 ALIGNMENT 0 YS2-13l08.p1k chr01 266 249 134638 134637 C 18 0.00 266 accept_chi 1 ALIGNMENT 203 YS2-13l08.q1k chr01 37 261 134637 134861 F 225 98.22 301 accept_chi 0 ALIGNMENT 36 YS2-13l08.q1k vc_5 298 263 1 36 C 36 100.00 301 reject_low 8 ALIGNMENT 40 YS2-13l08.q1k vc_4 262 301 5832 5871 F 40 100.00 301 reject_low 5 ALIGNMENT 38 YS2-13l08.q1k vc_7 264 301 13525 13562 F 38 100.00 301 reject_low 7 ALIGNMENT 40 YS2-13l08.q1k vc_1 301 262 2472 2511 C 40 100.00 301 reject_low 2 ALIGNMENT 0 YS2-13l08.q1k vc_7 62 263 13525 13524 F 202 0.00 301 reject_low 7 ALIGNMENT 115 YS2-13l10.q1k chr12 450 670 64066 64286 F 221 84.62 1390 reject_low 8 ALIGNMENT 0 YS2-13l10.q1k chr12 911 671 498958 498957 C 241 0.00 1390 reject_low 11 ALIGNMENT 107 YS2-13l10.q1k chr12 482 670 65010 65198 F 189 86.24 1390 reject_low 15 ALIGNMENT 0 YS2-13l10.q1k chr12 671 911 64514 64513 F 241 0.00 1390 reject_low 10 ALIGNMENT 0 YS2-13l10.q1k chr12 671 911 65198 65197 F 241 0.00 1390 reject_low 15 ALIGNMENT 0 YS2-13l10.q1k chr12 62 481 65010 65009 F 420 0.00 1390 reject_low 15 ALIGNMENT 309 YS2-13l10.q1k chr11 290 674 617636 618020 F 385 94.03 1390 reject_low 3 ALIGNMENT 0 YS2-13l10.p1k vc_4 62 1025 5875 5874 F 964 0.00 1235 reject_low 4 ALIGNMENT 0 YS2-13l10.p1k chr12 860 594 64522 64521 C 267 0.00 1235 reject_low 8 ALIGNMENT 309 YS2-13l10.p1k chr11 752 368 617636 618020 C 385 94.03 1235 reject_low 2 ALIGNMENT 34 YS2-13l10.q1k vc_2 1049 1008 2105 2147 C 42 95.24 1390 reject_low 6 ALIGNMENT 0 YS2-13l10.p1k chr12 860 593 64067 64066 C 268 0.00 1235 reject_low 13 ALIGNMENT 125 YS2-13l10.q1k chr12 449 670 64521 64742 F 222 86.04 1390 reject_low 7 ALIGNMENT 107 YS2-13l10.q1k chr12 449 670 64293 64514 F 222 83.33 1390 reject_low 10 ALIGNMENT 0 YS2-13l10.q1k vc_2 1007 62 2148 2147 C 946 0.00 1390 reject_low 6 ALIGNMENT 0 YS2-13l10.p1k chr11 367 62 618021 618020 C 306 0.00 1235 reject_low 2 ALIGNMENT 115 YS2-13l10.p1k chr12 593 373 64749 64969 C 221 84.62 1235 reject_low 7 ALIGNMENT 0 YS2-13l10.q1k chr11 675 911 618020 618019 F 237 0.00 1390 reject_low 3 ALIGNMENT 0 YS2-13l10.q1k chr12 62 448 64521 64520 F 387 0.00 1390 reject_low 7 ALIGNMENT 115 YS2-13l10.p1k chr12 592 372 64066 64286 C 221 84.62 1235 reject_low 13 ALIGNMENT 0 YS2-13l10.p1k chr12 371 62 64743 64742 C 310 0.00 1235 reject_low 8 ALIGNMENT 0 YS2-13l10.q1k chr12 62 448 64749 64748 F 387 0.00 1390 reject_low 9 ALIGNMENT 125 YS2-13l10.p1k chr12 593 372 64521 64742 C 222 86.04 1235 reject_low 8 ALIGNMENT 0 YS2-13l10.p1k chr12 371 62 65199 65198 C 310 0.00 1235 reject_low 9,10 ALIGNMENT 0 YS2-13l10.p1k chr12 372 62 64970 64969 C 311 0.00 1235 reject_low 7 ALIGNMENT 0 YS2-13l10.q1k chr12 671 911 64286 64285 F 241 0.00 1390 reject_low 8 ALIGNMENT 0 YS2-13l10.q1k chr12 670 911 64969 64968 F 242 0.00 1390 reject_low 9 ALIGNMENT 0 YS2-13l10.p1k chr12 592 860 499176 499175 F 269 0.00 1235 reject_low 12 ALIGNMENT 75 YS2-13l10.p1k vc_4 1026 1183 5875 6043 F 158 84.18 1235 reject_low 4 ALIGNMENT 160 YS2-13l10.q1k chr12 670 451 498957 499176 C 220 91.36 1390 reject_low 11 ALIGNMENT 0 YS2-13l10.p1k vc_7 62 1025 13566 13565 F 964 0.00 1235 reject_low 5 ALIGNMENT 107 YS2-13l10.p1k chr12 593 372 64293 64514 C 222 83.33 1235 reject_low 14 ALIGNMENT 107 YS2-13l10.p1k chr12 560 372 65010 65198 C 189 86.24 1235 reject_low 9,10 ALIGNMENT 0 YS2-13l10.p1k chr12 62 371 498957 498956 F 310 0.00 1235 reject_low 12 ALIGNMENT 0 YS2-13l10.p1k chr12 371 62 64515 64514 C 310 0.00 1235 reject_low 14 ALIGNMENT 0 YS2-13l10.q1k chr12 450 62 499177 499176 C 389 0.00 1390 reject_low 11 ALIGNMENT 160 YS2-13l10.p1k chr12 372 591 498957 499176 F 220 91.36 1235 reject_low 12 ALIGNMENT 855 YS2-13l10.p1k chr09 33 1003 68810 69783 F 971 97.01 1235 accept_chi 1 ALIGNMENT 0 YS2-13l10.q1k chr12 671 911 64742 64741 F 241 0.00 1390 reject_low 7 ALIGNMENT 0 YS2-13l10.p1k chr12 860 561 65011 65010 C 300 0.00 1235 reject_low 9,10 ALIGNMENT 0 YS2-13l10.p1k chr12 371 62 64287 64286 C 310 0.00 1235 reject_low 13 ALIGNMENT 0 YS2-13l10.q1k chr12 62 448 64293 64292 F 387 0.00 1390 reject_low 10 ALIGNMENT 0 YS2-13l10.p1k chr11 860 753 617637 617636 C 108 0.00 1235 reject_low 2 ALIGNMENT 0 YS2-13l10.q1k chr11 62 289 617636 617635 F 228 0.00 1390 reject_low 3 ALIGNMENT 862 YS2-13l10.q1k chr09 1009 34 68804 69787 C 976 97.64 1390 accept_chi 0 ALIGNMENT 75 YS2-13l10.p1k vc_7 1026 1183 13566 13734 F 158 84.18 1235 reject_low 5 ALIGNMENT 0 YS2-13l10.p1k chr12 860 594 64750 64749 C 267 0.00 1235 reject_low 7 ALIGNMENT 0 YS2-13l10.q1k chr12 62 449 64066 64065 F 388 0.00 1390 reject_low 8 ALIGNMENT 0 YS2-13l10.p1k chr12 860 594 64294 64293 C 267 0.00 1235 reject_low 14 ALIGNMENT 115 YS2-13l10.q1k chr12 449 669 64749 64969 F 221 84.62 1390 reject_low 9 ALIGNMENT 0 YS2-13l11.q1k vc_3 224 62 2514 2513 C 163 0.00 266 reject_low 3 ALIGNMENT 39 YS2-13l11.q1k vc_5 266 228 5025 5063 C 39 100.00 266 reject_low 5 ALIGNMENT 42 YS2-13l11.q1k vc_3 266 225 2472 2513 C 42 100.00 266 reject_low 3 ALIGNMENT 0 YS2-13l11.q1k vc_1 224 62 2514 2513 C 163 0.00 266 reject_low 2 ALIGNMENT 36 YS2-13l11.q1k vc_5 263 228 1 36 C 36 100.00 266 reject_low 7 ALIGNMENT 0 YS2-13l11.p1k chr13 235 253 708638 708637 F 19 0.00 253 accept_chi 0 ALIGNMENT 0 YS2-13l11.q1k vc_7 62 228 13525 13524 F 167 0.00 266 reject_low 6 ALIGNMENT 38 YS2-13l11.q1k vc_7 229 266 13525 13562 F 38 100.00 266 reject_low 6 ALIGNMENT 0 YS2-13l11.q1k vc_5 227 62 5064 5063 C 166 0.00 266 reject_low 5 ALIGNMENT 0 YS2-13l11.q1k vc_5 227 62 37 36 C 166 0.00 266 reject_low 7 ALIGNMENT 0 YS2-13l11.q1k vc_4 62 224 5830 5829 F 163 0.00 266 reject_low 4 ALIGNMENT 42 YS2-13l11.q1k vc_1 266 225 2472 2513 C 42 100.00 266 reject_low 2 ALIGNMENT 0 YS2-13l11.q1k chr13 266 227 708433 708432 C 40 0.00 266 accept_chi 1 ALIGNMENT 178 YS2-13l11.q1k chr13 226 23 708432 708638 C 204 98.53 266 accept_chi 1 ALIGNMENT 185 YS2-13l11.p1k chr13 28 234 708432 708638 F 207 99.03 253 accept_chi 0 ALIGNMENT 42 YS2-13l11.q1k vc_4 225 266 5830 5871 F 42 100.00 266 reject_low 4 ALIGNMENT 970 YS2-13l13.p1k chr02 1187 31 745455 746632 C 1157 95.59 1249 accept 0 ALIGNMENT 980 YS2-13l13.q1k chr02 28 1114 742910 744006 F 1087 97.52 1354 accept 0 ALIGNMENT 949 YS2-13l14.p1k chr14 36 1154 337396 338517 F 1119 95.71 1290 accept 0 ALIGNMENT 1031 YS2-13l14.q1k chr14 1278 30 340670 341916 C 1249 94.64 1459 accept 0 ALIGNMENT 40 YS2-13l15.q1k vc_3 484 445 2472 2511 C 40 100.00 484 reject_low 3 ALIGNMENT 0 YS2-13l15.q1k vc_3 444 62 2512 2511 C 383 0.00 484 reject_low 3 ALIGNMENT 40 YS2-13l15.q1k vc_2 484 445 2105 2144 C 40 100.00 484 reject_low 2 ALIGNMENT 0 YS2-13l15.q1k vc_1 444 62 2512 2511 C 383 0.00 484 reject_low 1 ALIGNMENT 38 YS2-13l15.q1k vc_7 447 484 13525 13562 F 38 100.00 484 reject_low 7 ALIGNMENT 38 YS2-13l15.q1k vc_7 447 484 63 100 F 38 100.00 484 reject_low 6 ALIGNMENT 0 YS2-13l15.q1k vc_5 445 62 5064 5063 C 384 0.00 484 reject_low 5 ALIGNMENT 40 YS2-13l15.q1k vc_4 445 484 5832 5871 F 40 100.00 484 reject_low 4 ALIGNMENT 399 YS2-13l15.q1k chr12 35 444 386582 386991 F 410 99.51 484 accept 0 ALIGNMENT 0 YS2-13l15.q1k vc_4 62 444 5832 5831 F 383 0.00 484 reject_low 4 ALIGNMENT 0 YS2-13l15.q1k vc_7 62 446 13525 13524 F 385 0.00 484 reject_low 7 ALIGNMENT 39 YS2-13l15.q1k vc_5 484 446 5025 5063 C 39 100.00 484 reject_low 5 ALIGNMENT 0 YS2-13l15.q1k vc_2 444 62 2145 2144 C 383 0.00 484 reject_low 2 ALIGNMENT 40 YS2-13l15.q1k vc_1 484 445 2472 2511 C 40 100.00 484 reject_low 1 ALIGNMENT 36 YS2-13l15.q1k vc_5 481 446 1 36 C 36 100.00 484 reject_low 8 ALIGNMENT 0 YS2-13l15.q1k vc_7 62 446 63 62 F 385 0.00 484 reject_low 6 ALIGNMENT 0 YS2-13l15.q1k vc_5 445 62 37 36 C 384 0.00 484 reject_low 8 ALIGNMENT 0 YS2-13l15.q1k chr12 445 484 386991 386990 F 40 0.00 484 accept 0 ALIGNMENT 0 YS2-13l16.q1k chr07 903 517 287353 287352 C 387 0.00 1309 reject_low 5 ALIGNMENT 120 YS2-13l16.q1k chr13 524 396 379290 379418 C 129 98.45 1309 reject_low 2 ALIGNMENT 107 YS2-13l16.q1k chr11 402 523 302558 302679 F 122 96.72 1309 reject_low 4 ALIGNMENT 0 YS2-13l16.q1k chr16 392 62 56289 56288 C 331 0.00 1309 reject_low 1 ALIGNMENT 0 YS2-13l16.q1k chr13 395 62 379419 379418 C 334 0.00 1309 reject_low 2 ALIGNMENT 0 YS2-13l16.q1k chr07 903 533 878696 878695 C 371 0.00 1309 reject_low 3 ALIGNMENT 0 YS2-13l16.q1k chr11 524 903 302679 302678 F 380 0.00 1309 reject_low 4 ALIGNMENT 119 YS2-13l16.q1k chr16 523 393 56158 56288 C 131 97.71 1309 reject_low 1 ALIGNMENT 111 YS2-13l16.q1k chr07 532 402 878695 878825 C 131 96.18 1309 reject_low 3 ALIGNMENT 105 YS2-13l16.q1k chr07 516 402 287352 287466 C 115 97.39 1309 reject_low 5 ALIGNMENT 0 YS2-13l16.q1k chr07 401 62 287467 287466 C 340 0.00 1309 reject_low 5 ALIGNMENT 0 YS2-13l16.q1k chr13 903 525 379291 379290 C 379 0.00 1309 reject_low 2 ALIGNMENT 0 YS2-13l16.q1k chr07 401 62 878826 878825 C 340 0.00 1309 reject_low 3 ALIGNMENT 0 YS2-13l16.q1k chr16 903 524 56159 56158 C 380 0.00 1309 reject_low 1 ALIGNMENT 0 YS2-13l16.q1k chr11 62 401 302558 302557 F 340 0.00 1309 reject_low 4 ALIGNMENT 835 YS2-13l16.q1k chr10 1046 28 415297 416322 C 1019 95.58 1309 accept 0 ALIGNMENT 0 YS2-13l17.q1k chr05 98 144 5112 5126 F 47 0.00 373 reject_low 37 ALIGNMENT 0 YS2-13l17.q1k chr12 373 333 1066370 1066369 C 41 0.00 373 reject_low 38 ALIGNMENT 272 YS2-13l17.p1k chr13 324 34 3973 4263 C 291 97.94 343 reject_low 26 ALIGNMENT 0 YS2-13l17.q1k chr12 373 333 1072922 1072921 C 41 0.00 373 ambiguous_tel 1 ALIGNMENT 60 YS2-13l17.p1k chr05 324 264 5051 5111 C 61 100.00 343 reject_low 39 ALIGNMENT 0 YS2-13l17.q1k chr10 333 373 5714 5713 F 41 0.00 373 reject_low 3 ALIGNMENT 0 YS2-13l17.p1k chr14 343 325 5048 5047 C 19 0.00 343 reject_low 31 ALIGNMENT 266 YS2-13l17.p1k chr14 324 34 5047 5337 C 291 97.25 343 reject_low 31 ALIGNMENT 0 YS2-13l17.q1k chr13 333 373 4268 4267 F 41 0.00 373 reject_low 9 ALIGNMENT 275 YS2-13l17.q1k chr14 37 332 5047 5342 F 296 97.64 373 reject_low 15 ALIGNMENT 280 YS2-13l17.q1k chr06 37 332 3134 3430 F 296 98.31 373 reject_low 10 ALIGNMENT 0 YS2-13l17.p1k chr05 263 217 5112 5126 C 47 0.00 343 reject_low 39 ALIGNMENT 60 YS2-13l17.q1k chr05 37 97 5051 5111 F 61 100.00 373 reject_low 37 ALIGNMENT 272 YS2-13l17.p1k chr12 324 34 9632 9922 C 291 97.94 343 ambiguous_tel 0 ALIGNMENT 0 YS2-13l17.p1k chr06 343 325 3135 3134 C 19 0.00 343 reject_low 27 ALIGNMENT 0 YS2-13l17.q1k chr05 333 373 5314 5313 F 41 0.00 373 reject_low 37 ALIGNMENT 0 YS2-13l17.p1k chr16 343 325 4957 4956 C 19 0.00 343 reject_low 32 ALIGNMENT 281 YS2-13l17.q1k chr13 37 332 3973 4268 F 296 98.31 373 reject_low 9 ALIGNMENT 284 YS2-13l17.q1k chr04 332 37 1526720 1527015 C 296 98.65 373 reject_low 5 ALIGNMENT 0 YS2-13l17.p1k chr07 325 343 1085921 1085920 F 19 0.00 343 reject_low 28 ALIGNMENT 0 YS2-13l17.p1k chr08 325 343 558533 558532 F 19 0.00 343 reject_low 29 ALIGNMENT 21 YS2-13l17.q1k vc_4 18 38 5812 5832 F 21 100.00 373 reject_low 33 ALIGNMENT 0 YS2-13l17.q1k chr16 373 333 943785 943784 C 41 0.00 373 reject_low 11 ALIGNMENT 271 YS2-13l17.p1k chr06 324 34 3134 3425 C 291 97.94 343 reject_low 27 ALIGNMENT 0 YS2-13l17.q1k chr14 333 373 5342 5341 F 41 0.00 373 reject_low 15 ALIGNMENT 284 YS2-13l17.p1k chr10 324 34 5419 5709 C 291 99.31 343 reject_low 18 ALIGNMENT 0 YS2-13l17.q1k chr08 333 373 4124 4123 F 41 0.00 373 reject_low 6 ALIGNMENT 41 YS2-13l17.q1k vc_4 333 373 5831 5871 F 41 100.00 373 reject_low 33 ALIGNMENT 267 YS2-13l17.p1k chr08 30 324 558238 558533 F 295 96.95 343 reject_low 29 ALIGNMENT 276 YS2-13l17.p1k chr04 30 324 1526720 1527015 F 295 97.97 343 reject_low 20 ALIGNMENT 279 YS2-13l17.p1k chr05 30 324 571549 571844 F 295 98.31 343 reject_low 19 ALIGNMENT 185 YS2-13l17.q1k chr12 332 145 1066369 1066556 C 188 99.47 373 reject_low 38 ALIGNMENT 0 YS2-13l17.p1k chr12 325 343 1073216 1073215 F 19 0.00 343 reject_low 21 ALIGNMENT 272 YS2-13l17.p1k chr12 324 34 4097 4387 C 291 97.94 343 reject_low 25 ALIGNMENT 0 YS2-13l17.p1k chr16 325 343 944080 944079 F 19 0.00 343 reject_low 23 ALIGNMENT 293 YS2-13l17.q1k chr10 37 332 5419 5714 F 296 99.66 373 reject_low 3 ALIGNMENT 0 YS2-13l17.q1k chr04 373 333 1526721 1526720 C 41 0.00 373 reject_low 5 ALIGNMENT 0 YS2-13l17.p1k chr05 325 343 571844 571843 F 19 0.00 343 reject_low 19 ALIGNMENT 0 YS2-13l17.q1k chr02 333 373 4593 4592 F 41 0.00 373 reject_low 12 ALIGNMENT 0 YS2-13l17.q1k chr15 373 333 1085886 1085885 C 41 0.00 373 reject_low 7 ALIGNMENT 0 YS2-13l17.p1k chr09 343 325 5437 5436 C 19 0.00 343 reject_low 17 ALIGNMENT 0 YS2-13l17.q1k chr08 373 333 558239 558238 C 41 0.00 373 reject_low 14 ALIGNMENT 177 YS2-13l17.p1k chr05 216 34 5127 5309 C 183 98.91 343 reject_low 39 ALIGNMENT 281 YS2-13l17.q1k chr12 37 332 9632 9927 F 296 98.31 373 reject_low 8 ALIGNMENT 0 YS2-13l17.q1k chr09 333 373 5731 5730 F 41 0.00 373 reject_low 2 ALIGNMENT 284 YS2-13l17.q1k chr08 37 332 3829 4124 F 296 98.65 373 reject_low 6 ALIGNMENT 38 YS2-13l17.q1k vc_7 336 373 13525 13562 F 38 100.00 373 reject_low 36 ALIGNMENT 0 YS2-13l17.q1k vc_7 62 335 13525 13524 F 274 0.00 373 reject_low 36 ALIGNMENT 21 YS2-13l17.q1k vc_7 18 38 2727 2747 F 21 100.00 373 reject_low 34 ALIGNMENT 0 YS2-13l17.p1k chr02 343 325 4299 4298 C 19 0.00 343 reject_low 30 ALIGNMENT 275 YS2-13l17.q1k chr08 332 37 558238 558533 C 296 97.64 373 reject_low 14 ALIGNMENT 275 YS2-13l17.q1k chr07 332 37 1085626 1085921 C 296 97.64 373 reject_low 13 ALIGNMENT 0 YS2-13l17.p1k chr08 343 325 3830 3829 C 19 0.00 343 reject_low 24 ALIGNMENT 281 YS2-13l17.q1k chr12 37 332 4097 4392 F 296 98.31 373 ambiguous_tel 0 ALIGNMENT 284 YS2-13l17.q1k chr12 332 37 1072921 1073216 C 296 98.65 373 ambiguous_tel 1 ALIGNMENT 275 YS2-13l17.q1k chr16 37 332 4956 5251 F 296 97.64 373 reject_low 16 ALIGNMENT 0 YS2-13l17.q1k chr12 333 373 9927 9926 F 41 0.00 373 reject_low 8 ALIGNMENT 0 YS2-13l17.q1k chr16 333 373 5251 5250 F 41 0.00 373 reject_low 16 ALIGNMENT 177 YS2-13l17.p1k chr12 30 216 1066369 1066556 F 187 98.40 343 ambiguous_tel 1 ALIGNMENT 0 YS2-13l17.p1k chr04 325 343 1527015 1527014 F 19 0.00 343 reject_low 20 ALIGNMENT 280 YS2-13l17.q1k chr16 332 37 943784 944080 C 296 98.31 373 reject_low 11 ALIGNMENT 266 YS2-13l17.p1k chr16 324 34 4956 5246 C 291 97.25 343 reject_low 32 ALIGNMENT 0 YS2-13l17.q1k vc_7 62 335 63 62 F 274 0.00 373 reject_low 35 ALIGNMENT 0 YS2-13l17.q1k vc_4 39 332 5833 5830 F 294 0.00 373 reject_low 33 ALIGNMENT 0 YS2-13l17.p1k chr10 343 325 5420 5419 C 19 0.00 343 reject_low 18 ALIGNMENT 60 YS2-13l17.p1k chr12 264 324 1066572 1066632 F 61 100.00 343 ambiguous_tel 1 ALIGNMENT 185 YS2-13l17.q1k chr05 145 332 5127 5314 F 188 99.47 373 reject_low 37 ALIGNMENT 0 YS2-13l17.q1k chr06 333 373 3430 3429 F 41 0.00 373 reject_low 10 ALIGNMENT 0 YS2-13l17.q1k chr12 333 373 4392 4391 F 41 0.00 373 ambiguous_tel 0 ALIGNMENT 0 YS2-13l17.p1k chr12 325 343 1066632 1066631 F 19 0.00 343 ambiguous_tel 1 ALIGNMENT 0 YS2-13l17.q1k vc_7 39 373 2747 2746 F 335 0.00 373 reject_low 34 ALIGNMENT 0 YS2-13l17.p1k chr13 343 325 3974 3973 C 19 0.00 343 reject_low 26 ALIGNMENT 267 YS2-13l17.p1k chr07 30 324 1085626 1085921 F 295 96.95 343 reject_low 28 ALIGNMENT 293 YS2-13l17.q1k chr09 37 332 5436 5731 F 296 99.66 373 reject_low 2 ALIGNMENT 272 YS2-13l17.p1k chr16 30 324 943784 944080 F 295 97.63 343 reject_low 23 ALIGNMENT 276 YS2-13l17.p1k chr12 30 324 1072921 1073216 F 295 97.97 343 reject_low 21 ALIGNMENT 0 YS2-13l17.p1k chr05 343 325 5052 5051 C 19 0.00 343 reject_low 39 ALIGNMENT 0 YS2-13l17.q1k chr12 144 98 1066557 1066571 C 47 0.00 373 reject_low 38 ALIGNMENT 266 YS2-13l17.p1k chr02 324 34 4298 4588 C 291 97.25 343 reject_low 30 ALIGNMENT 275 YS2-13l17.q1k chr02 37 332 4298 4593 F 296 97.64 373 reject_low 12 ALIGNMENT 0 YS2-13l17.p1k chr12 217 263 1066557 1066571 F 47 0.00 343 ambiguous_tel 1 ALIGNMENT 0 YS2-13l17.p1k chr12 343 325 9633 9632 C 19 0.00 343 ambiguous_tel 0 ALIGNMENT 0 YS2-13l17.q1k chr05 373 333 571550 571549 C 41 0.00 373 reject_low 4 ALIGNMENT 284 YS2-13l17.p1k chr09 324 34 5436 5726 C 291 99.31 343 reject_low 17 ALIGNMENT 275 YS2-13l17.p1k chr08 324 34 3829 4119 C 291 98.28 343 reject_low 24 ALIGNMENT 287 YS2-13l17.q1k chr05 332 37 571549 571844 C 296 98.99 373 reject_low 4 ALIGNMENT 0 YS2-13l17.p1k chr12 343 325 4098 4097 C 19 0.00 343 reject_low 25 ALIGNMENT 38 YS2-13l17.q1k vc_7 336 373 63 100 F 38 100.00 373 reject_low 35 ALIGNMENT 60 YS2-13l17.q1k chr12 97 37 1066572 1066632 C 61 100.00 373 reject_low 38 ALIGNMENT 0 YS2-13l17.p1k chr15 325 343 1086180 1086179 F 19 0.00 343 reject_low 22 ALIGNMENT 0 YS2-13l17.q1k chr07 373 333 1085627 1085626 C 41 0.00 373 reject_low 13 ALIGNMENT 276 YS2-13l17.p1k chr15 30 324 1085885 1086180 F 295 97.97 343 reject_low 22 ALIGNMENT 284 YS2-13l17.q1k chr15 332 37 1085885 1086180 C 296 98.65 373 reject_low 7 ALIGNMENT 67 YS2-13l19.q1k chr04 837 656 1281462 1281643 C 182 80.22 1356 reject_low 1 ALIGNMENT 169 YS2-13l19.q1k chr04 418 43 1281896 1282271 C 376 82.45 1356 reject_low 1 ALIGNMENT 939 YS2-13l19.q1k chr15 1145 41 621747 622868 C 1105 96.20 1356 accept 0 ALIGNMENT 0 YS2-13l19.q1k chr04 872 838 1281463 1281462 C 35 0.00 1356 reject_low 1 ALIGNMENT 0 YS2-13l19.q1k chr04 655 419 1281644 1281895 C 237 0.00 1356 reject_low 1 ALIGNMENT 1037 YS2-13l20.q1k chr07 37 1257 87164 88388 F 1221 95.99 1395 accept 0 ALIGNMENT 963 YS2-13l20.p1k chr07 1191 17 90503 91690 C 1175 95.23 1214 accept 0 ALIGNMENT 909 YS2-13l23.q1k chr09 1105 36 163251 164335 C 1070 95.89 1319 accept 0 ALIGNMENT 125 YS2-13l24.q1k chr12 35 167 468497 468629 F 133 100.00 208 accept 1 ALIGNMENT 0 YS2-13l24.q1k vc_1 166 62 2514 2513 C 105 0.00 208 reject_low 3 ALIGNMENT 38 YS2-13l24.q1k vc_7 171 208 13525 13562 F 38 100.00 208 reject_low 8 ALIGNMENT 50 YS2-13l24.q1k chr06 90 35 31622 31677 C 56 98.21 208 reject_low 2 ALIGNMENT 0 YS2-13l24.q1k vc_5 169 62 5064 5063 C 108 0.00 208 reject_low 7 ALIGNMENT 0 YS2-13l24.q1k chr12 168 208 468629 468628 F 41 0.00 208 accept 1 ALIGNMENT 0 YS2-13l24.q1k vc_7 62 170 13525 13524 F 109 0.00 208 reject_low 8 ALIGNMENT 42 YS2-13l24.q1k vc_2 208 167 2105 2146 C 42 100.00 208 reject_low 4 ALIGNMENT 42 YS2-13l24.q1k vc_1 208 167 2472 2513 C 42 100.00 208 reject_low 3 ALIGNMENT 42 YS2-13l24.q1k vc_3 208 167 2472 2513 C 42 100.00 208 reject_low 5 ALIGNMENT 39 YS2-13l24.q1k vc_5 208 170 5025 5063 C 39 100.00 208 reject_low 7 ALIGNMENT 42 YS2-13l24.q1k vc_4 167 208 5830 5871 F 42 100.00 208 reject_low 6 ALIGNMENT 0 YS2-13l24.q1k vc_4 62 166 5830 5829 F 105 0.00 208 reject_low 6 ALIGNMENT 0 YS2-13l24.q1k vc_2 166 62 2147 2146 C 105 0.00 208 reject_low 4 ALIGNMENT 0 YS2-13l24.q1k vc_3 166 62 2514 2513 C 105 0.00 208 reject_low 5 ALIGNMENT 0 YS2-13l24.q1k chr12 168 208 459492 459491 F 41 0.00 208 accept 0 ALIGNMENT 125 YS2-13l24.q1k chr12 35 167 459360 459492 F 133 100.00 208 accept 0 ALIGNMENT 0 YS2-13l24.q1k chr06 208 91 31623 31622 C 118 0.00 208 reject_low 2 ALIGNMENT 36 YS2-13l24.q1k vc_5 205 170 1 36 C 36 100.00 208 reject_low 9 ALIGNMENT 0 YS2-13l24.q1k vc_5 169 62 37 36 C 108 0.00 208 reject_low 9 ALIGNMENT 0 YS2-13m03.p1k chr14 779 62 70057 70056 C 718 0.00 1139 reject_low 3 ALIGNMENT 21 YS2-13m03.p1k chr10 768 802 150064 150098 F 35 94.29 1139 reject_low 1 ALIGNMENT 0 YS2-13m03.p1k chr13 867 807 514629 514628 C 61 0.00 1139 reject_low 8 ALIGNMENT 0 YS2-13m03.p1k chr07 782 62 379192 379191 C 721 0.00 1139 reject_low 6 ALIGNMENT 20 YS2-13m03.p1k chr07 805 781 988900 988924 C 25 100.00 1139 reject_low 7 ALIGNMENT 20 YS2-13m03.p1k chr10 809 785 403982 404006 C 25 100.00 1139 reject_low 5 ALIGNMENT 0 YS2-13m03.p1k chr10 62 767 150064 150063 F 706 0.00 1139 reject_low 1 ALIGNMENT 0 YS2-13m03.p1k chr14 867 809 70029 70028 C 59 0.00 1139 reject_low 3 ALIGNMENT 872 YS2-13m03.p1k chr11 31 1071 522552 523585 F 1041 95.29 1139 accept 0 ALIGNMENT 21 YS2-13m03.p1k chr07 808 783 379166 379191 C 26 100.00 1139 reject_low 6 ALIGNMENT 0 YS2-13m03.p1k chr10 867 810 403983 403982 C 58 0.00 1139 reject_low 5 ALIGNMENT 23 YS2-13m03.p1k chr14 808 780 70028 70056 C 29 100.00 1139 reject_low 3 ALIGNMENT 0 YS2-13m03.p1k chr01 807 867 113319 113318 F 61 0.00 1139 reject_low 4 ALIGNMENT 0 YS2-13m03.p1k chr13 781 62 514653 514652 C 720 0.00 1139 reject_low 8 ALIGNMENT 0 YS2-13m03.p1k chr07 867 806 988901 988900 C 62 0.00 1139 reject_low 7 ALIGNMENT 0 YS2-13m03.p1k chr10 784 62 404007 404006 C 723 0.00 1139 reject_low 5 ALIGNMENT 0 YS2-13m03.p1k chr07 867 809 379167 379166 C 59 0.00 1139 reject_low 6 ALIGNMENT 0 YS2-13m03.p1k chr07 780 62 988925 988924 C 719 0.00 1139 reject_low 7 ALIGNMENT 20 YS2-13m03.p1k chr14 804 767 604229 604266 C 38 92.11 1139 reject_low 2 ALIGNMENT 0 YS2-13m03.p1k chr10 803 867 150098 150097 F 65 0.00 1139 reject_low 1 ALIGNMENT 0 YS2-13m03.p1k chr14 867 805 604230 604229 C 63 0.00 1139 reject_low 2 ALIGNMENT 0 YS2-13m03.p1k chr14 766 62 604267 604266 C 705 0.00 1139 reject_low 2 ALIGNMENT 0 YS2-13m03.p1k chr01 62 773 113287 113286 F 712 0.00 1139 reject_low 4 ALIGNMENT 1060 YS2-13m03.q1k chr11 1219 40 527311 528488 C 1180 96.69 1365 accept 0 ALIGNMENT 20 YS2-13m03.p1k chr01 774 806 113287 113319 F 33 93.94 1139 reject_low 4 ALIGNMENT 20 YS2-13m03.p1k chr13 806 782 514628 514652 C 25 100.00 1139 reject_low 8 ALIGNMENT 962 YS2-13m04.q1k chr06 1119 31 84911 86015 C 1089 97.34 1311 accept 0 ALIGNMENT 905 YS2-13m04.p1k chr06 34 1146 83561 84684 F 1113 94.79 1185 accept 0 ALIGNMENT 41 YS2-13m05.q1k vc_3 363 323 2472 2512 C 41 100.00 363 reject_low 3 ALIGNMENT 21 YS2-13m05.q1k vc_1 44 21 2508 2531 C 24 87.50 363 reject_low 2 ALIGNMENT 38 YS2-13m05.q1k vc_7 326 363 13525 13562 F 38 100.00 363 reject_low 6 ALIGNMENT 0 YS2-13m05.q1k vc_5 324 98 5064 5063 C 227 0.00 363 reject_low 5 ALIGNMENT 217 YS2-13m05.q1k chr04 44 322 979606 979884 F 279 94.62 363 accept_chi 1 ALIGNMENT 0 YS2-13m05.q1k vc_5 324 98 37 36 C 227 0.00 363 reject_low 7 ALIGNMENT 0 YS2-13m05.p1k chr04 328 310 979604 979603 C 19 0.00 328 accept_chi 0 ALIGNMENT 229 YS2-13m05.p1k chr04 309 29 979603 979884 C 281 95.73 328 accept_chi 0 ALIGNMENT 0 YS2-13m05.q1k vc_4 45 322 5836 5830 F 278 0.00 363 reject_low 4 ALIGNMENT 0 YS2-13m05.q1k chr04 323 363 979884 979883 F 41 0.00 363 accept_chi 1 ALIGNMENT 39 YS2-13m05.q1k vc_5 363 325 5025 5063 C 39 100.00 363 reject_low 5 ALIGNMENT 41 YS2-13m05.q1k vc_1 363 323 2472 2512 C 41 100.00 363 reject_low 2 ALIGNMENT 21 YS2-13m05.q1k vc_4 21 44 5812 5835 F 24 87.50 363 reject_low 4 ALIGNMENT 36 YS2-13m05.q1k vc_5 360 325 1 36 C 36 100.00 363 reject_low 7 ALIGNMENT 21 YS2-13m05.q1k vc_3 44 21 2508 2531 C 24 87.50 363 reject_low 3 ALIGNMENT 0 YS2-13m05.q1k vc_7 98 325 13525 13524 F 228 0.00 363 reject_low 6 ALIGNMENT 41 YS2-13m05.q1k vc_4 323 363 5831 5871 F 41 100.00 363 reject_low 4 ALIGNMENT 0 YS2-13m05.q1k vc_1 322 45 2513 2507 C 278 0.00 363 reject_low 2 ALIGNMENT 0 YS2-13m05.q1k vc_3 322 45 2513 2507 C 278 0.00 363 reject_low 3 ALIGNMENT 36 YS2-13m06.q1k vc_5 347 312 1 36 C 36 100.00 350 reject_low 7 ALIGNMENT 0 YS2-13m06.q1k chr04 310 350 979884 979883 F 41 0.00 350 accept_chi 1 ALIGNMENT 41 YS2-13m06.q1k vc_3 350 310 2472 2512 C 41 100.00 350 reject_low 3 ALIGNMENT 0 YS2-13m06.q1k vc_7 62 312 13525 13524 F 251 0.00 350 reject_low 6 ALIGNMENT 235 YS2-13m06.p1k chr04 338 58 979603 979884 C 281 96.44 357 accept_chi 0 ALIGNMENT 0 YS2-13m06.q1k vc_5 311 62 5064 5063 C 250 0.00 350 reject_low 5 ALIGNMENT 38 YS2-13m06.q1k vc_7 313 350 13525 13562 F 38 100.00 350 reject_low 6 ALIGNMENT 231 YS2-13m06.q1k chr04 28 309 979603 979884 F 282 96.10 350 accept_chi 1 ALIGNMENT 0 YS2-13m06.p1k chr04 357 339 979604 979603 C 19 0.00 357 accept_chi 0 ALIGNMENT 0 YS2-13m06.q1k vc_3 309 62 2513 2512 C 248 0.00 350 reject_low 3 ALIGNMENT 41 YS2-13m06.q1k vc_1 350 310 2472 2512 C 41 100.00 350 reject_low 2 ALIGNMENT 39 YS2-13m06.q1k vc_5 350 312 5025 5063 C 39 100.00 350 reject_low 5 ALIGNMENT 41 YS2-13m06.q1k vc_4 310 350 5831 5871 F 41 100.00 350 reject_low 4 ALIGNMENT 0 YS2-13m06.q1k vc_5 311 62 37 36 C 250 0.00 350 reject_low 7 ALIGNMENT 0 YS2-13m06.q1k vc_1 309 62 2513 2512 C 248 0.00 350 reject_low 2 ALIGNMENT 0 YS2-13m06.q1k vc_4 62 309 5831 5830 F 248 0.00 350 reject_low 4 ALIGNMENT 0 YS2-13m07.q1k chr11 62 220 145138 145137 F 159 0.00 1338 reject_low 4 ALIGNMENT 0 YS2-13m07.p1k chr10 62 446 120930 120929 F 385 0.00 1160 reject_low 19 ALIGNMENT 55 YS2-13m07.q1k chr11 221 334 145138 145250 F 114 83.33 1338 reject_low 4 ALIGNMENT 0 YS2-13m07.p1k chr11 752 887 144932 144931 F 136 0.00 1160 reject_low 3 ALIGNMENT 56 YS2-13m07.p1k chr10 663 832 120930 121105 F 170 78.24 1160 reject_low 24 ALIGNMENT 25 YS2-13m07.p1k chr10 888 921 121224 121257 F 34 91.18 1160 reject_low 14,15,16,17,18,19,20,21,22,23,24,25 ALIGNMENT 102 YS2-13m07.p1k chr11 663 850 144682 144869 F 188 84.57 1160 reject_low 8 ALIGNMENT 115 YS2-13m07.p1k chr11 239 60 142648 142827 C 180 88.33 1160 reject_low 2 ALIGNMENT 29 YS2-13m07.p1k chr10 327 376 121146 121195 F 50 86.00 1160 reject_low 17 ALIGNMENT 0 YS2-13m07.q1k chr11 239 62 142026 142025 C 178 0.00 1338 reject_low 5 ALIGNMENT 0 YS2-13m07.p1k chr10 62 500 120930 120929 F 439 0.00 1160 reject_low 16 ALIGNMENT 0 YS2-13m07.q1k chr11 335 875 145250 145249 F 541 0.00 1338 reject_low 4 ALIGNMENT 0 YS2-13m07.p1k chr11 62 338 144736 144735 F 277 0.00 1160 reject_low 10 ALIGNMENT 32 YS2-13m07.p1k chr10 997 1096 121350 121454 F 100 78.00 1160 reject_low 14,15,16,18,19,20,21,22,23,24,25 ALIGNMENT 0 YS2-13m07.p1k chr11 431 377 142462 142537 C 55 0.00 1160 reject_low 2 ALIGNMENT 0 YS2-13m07.p1k chr10 377 887 121196 121223 F 511 0.00 1160 reject_low 17 ALIGNMENT 0 YS2-13m07.p1k chr10 755 887 121196 121223 F 133 0.00 1160 reject_low 16 ALIGNMENT 0 YS2-13m07.p1k chr11 62 716 144682 144681 F 655 0.00 1160 reject_low 13 ALIGNMENT 0 YS2-13m07.p1k chr11 572 887 144968 144967 F 316 0.00 1160 reject_low 10 ALIGNMENT 0 YS2-13m07.p1k chr11 626 887 144968 144967 F 262 0.00 1160 reject_low 1 ALIGNMENT 0 YS2-13m07.p1k chr11 62 548 144676 144675 F 487 0.00 1160 accept 0 ALIGNMENT 0 YS2-13m07.p1k chr11 62 500 144682 144681 F 439 0.00 1160 reject_low 3 ALIGNMENT 0 YS2-13m07.p1k chr10 62 386 120924 120923 F 325 0.00 1160 reject_low 15 ALIGNMENT 26 YS2-13m07.p1k chr11 376 327 142538 142587 C 50 84.00 1160 reject_low 2 ALIGNMENT 0 YS2-13m07.p1k chr11 62 338 144790 144789 F 277 0.00 1160 reject_low 12 ALIGNMENT 0 YS2-13m07.p1k chr10 815 887 121202 121223 F 73 0.00 1160 reject_low 23 ALIGNMENT 0 YS2-13m07.p1k chr10 62 645 120841 120840 F 584 0.00 1160 reject_low 25 ALIGNMENT 191 YS2-13m07.p1k chr11 387 659 144676 144948 F 273 90.11 1160 reject_low 7 ALIGNMENT 0 YS2-13m07.q1k chr11 875 335 141933 141932 C 541 0.00 1338 reject_low 5 ALIGNMENT 0 YS2-13m07.p1k chr10 62 332 120981 120980 F 271 0.00 1160 reject_low 18 ALIGNMENT 66 YS2-13m07.p1k chr10 336 484 121041 121195 F 149 81.88 1160 reject_low 20 ALIGNMENT 0 YS2-13m07.p1k chr10 62 335 121041 121040 F 274 0.00 1160 reject_low 20 ALIGNMENT 69 YS2-13m07.p1k chr10 447 700 120930 121195 F 254 76.38 1160 reject_low 19 ALIGNMENT 0 YS2-13m07.p1k chr11 806 887 144878 144877 F 82 0.00 1160 reject_low 9 ALIGNMENT 0 YS2-13m07.p1k chr11 851 887 144869 144868 F 37 0.00 1160 reject_low 8 ALIGNMENT 0 YS2-13m07.p1k chr10 760 887 120901 121223 F 128 0.00 1160 reject_low 21 ALIGNMENT 0 YS2-13m07.p1k chr10 593 887 121196 121223 F 295 0.00 1160 reject_low 14 ALIGNMENT 96 YS2-13m07.p1k chr10 332 592 120923 121195 F 261 79.69 1160 reject_low 14 ALIGNMENT 0 YS2-13m07.p1k chr10 485 887 121196 121223 F 403 0.00 1160 reject_low 20 ALIGNMENT 0 YS2-13m07.p1k chr10 922 996 121258 121349 F 75 0.00 1160 reject_low 14,15,16,18,19,20,21,22,23,24,25 ALIGNMENT 0 YS2-13m07.p1k chr10 816 887 121032 121223 F 72 0.00 1160 reject_low 25 ALIGNMENT 0 YS2-13m07.p1k chr11 62 608 144682 144681 F 547 0.00 1160 reject_low 9 ALIGNMENT 53 YS2-13m07.p1k chr11 717 821 144682 144786 F 105 83.81 1160 reject_low 13 ALIGNMENT 0 YS2-13m07.p1k chr10 62 326 121146 121145 F 265 0.00 1160 reject_low 17 ALIGNMENT 81 YS2-13m07.p1k chr10 549 814 120924 121201 F 266 77.44 1160 reject_low 23 ALIGNMENT 0 YS2-13m07.p1k chr11 485 887 144989 144988 F 403 0.00 1160 reject_low 11 ALIGNMENT 151 YS2-13m07.p1k chr11 609 805 144682 144878 F 197 92.39 1160 reject_low 9 ALIGNMENT 0 YS2-13m07.p1k chr10 62 483 120841 120840 F 422 0.00 1160 reject_low 23,24 ALIGNMENT 0 YS2-13m07.p1k chr10 833 887 121106 121223 F 55 0.00 1160 reject_low 24 ALIGNMENT 118 YS2-13m07.p1k chr11 339 571 144736 144968 F 233 83.69 1160 reject_low 10 ALIGNMENT 0 YS2-13m07.p1k chr10 539 887 121196 121223 F 349 0.00 1160 reject_low 18 ALIGNMENT 0 YS2-13m07.p1k chr11 822 887 144786 144785 F 66 0.00 1160 reject_low 13 ALIGNMENT 0 YS2-13m07.p1k chr11 326 240 142588 142647 C 87 0.00 1160 reject_low 2 ALIGNMENT 0 YS2-13m07.p1k chr10 62 331 120923 120922 F 270 0.00 1160 reject_low 14 ALIGNMENT 74 YS2-13m07.p1k chr11 339 497 144790 144948 F 159 82.39 1160 reject_low 12 ALIGNMENT 0 YS2-13m07.p1k chr11 660 887 144948 144947 F 228 0.00 1160 reject_low 7 ALIGNMENT 0 YS2-13m07.p1k chr10 62 699 120841 120840 F 638 0.00 1160 reject_low 21 ALIGNMENT 20 YS2-13m07.p1k chr11 484 432 142409 142461 C 53 79.25 1160 reject_low 2 ALIGNMENT 87 YS2-13m07.p1k chr10 387 646 120924 121195 F 260 78.46 1160 reject_low 15 ALIGNMENT 0 YS2-13m07.p1k chr11 62 338 144844 144843 F 277 0.00 1160 reject_low 11 ALIGNMENT 73 YS2-13m07.p1k chr10 333 538 120981 121195 F 206 79.13 1160 reject_low 18 ALIGNMENT 202 YS2-13m07.p1k chr11 501 751 144682 144932 F 251 93.63 1160 reject_low 3 ALIGNMENT 490 YS2-13m07.p1k chr11 549 1160 144676 145303 F 612 94.12 1160 accept 0 ALIGNMENT 0 YS2-13m07.p1k chr10 540 548 120897 120923 F 9 0.00 1160 reject_low 23 ALIGNMENT 0 YS2-13m07.p1k chr11 887 485 142410 142409 C 403 0.00 1160 reject_low 2 ALIGNMENT 193 YS2-13m07.p1k chr11 447 742 144682 144977 F 296 88.51 1160 reject_low 6 ALIGNMENT 0 YS2-13m07.p1k chr11 62 662 144682 144681 F 601 0.00 1160 reject_low 8 ALIGNMENT 0 YS2-13m07.p1k chr11 498 887 144948 144947 F 390 0.00 1160 reject_low 12 ALIGNMENT 0 YS2-13m07.p1k chr11 62 446 144682 144681 F 385 0.00 1160 reject_low 6 ALIGNMENT 35 YS2-13m07.p1k chr10 484 539 120841 120896 F 56 87.50 1160 reject_low 23,24 ALIGNMENT 81 YS2-13m07.p1k chr10 501 754 120930 121195 F 254 77.95 1160 reject_low 16 ALIGNMENT 57 YS2-13m07.q1k chr11 334 240 141932 142025 C 95 87.37 1338 reject_low 5 ALIGNMENT 39 YS2-13m07.p1k chr10 717 815 120930 121031 F 99 80.81 1160 reject_low 25 ALIGNMENT 35 YS2-13m07.p1k chr10 646 701 120841 120896 F 56 87.50 1160 reject_low 25 ALIGNMENT 86 YS2-13m07.p1k chr11 339 484 144844 144989 F 146 86.30 1160 reject_low 11 ALIGNMENT 39 YS2-13m07.p1k chr10 700 759 120841 120900 F 60 88.33 1160 reject_low 21 ALIGNMENT 453 YS2-13m07.p1k chr11 44 625 144388 144968 F 582 92.96 1160 reject_low 1 ALIGNMENT 0 YS2-13m07.p1k chr11 743 887 144977 144976 F 145 0.00 1160 reject_low 6 ALIGNMENT 0 YS2-13m07.p1k chr10 701 887 121196 121223 F 187 0.00 1160 reject_low 19 ALIGNMENT 1000 YS2-13m07.q1k chr11 1147 28 145193 146324 C 1120 97.41 1338 accept 0 ALIGNMENT 0 YS2-13m07.p1k chr10 702 716 120897 120929 F 15 0.00 1160 reject_low 25 ALIGNMENT 37 YS2-13m07.p1k chr10 333 430 121095 121195 F 98 79.59 1160 reject_low 22 ALIGNMENT 0 YS2-13m07.p1k chr10 62 332 121095 121094 F 271 0.00 1160 reject_low 22 ALIGNMENT 0 YS2-13m07.p1k chr10 540 662 120897 120929 F 123 0.00 1160 reject_low 24 ALIGNMENT 0 YS2-13m07.p1k chr11 62 386 144676 144675 F 325 0.00 1160 reject_low 7 ALIGNMENT 0 YS2-13m07.p1k chr10 431 887 121196 121223 F 457 0.00 1160 reject_low 22 ALIGNMENT 0 YS2-13m07.p1k chr10 647 887 121196 121223 F 241 0.00 1160 reject_low 15 ALIGNMENT 1005 YS2-13m08.q1k chr04 1231 41 738553 739752 C 1191 95.05 1415 accept 0 ALIGNMENT 962 YS2-13m08.p1k chr04 34 1174 733742 734882 F 1141 95.09 1241 accept 0 ALIGNMENT 0 YS2-13m09.q1k chrm 62 191 69438 69437 F 130 0.00 299 reject_low 12 ALIGNMENT 40 YS2-13m09.q1k chrm 198 255 73011 73066 F 58 93.10 299 reject_low 13 ALIGNMENT 39 YS2-13m09.q1k chrm 241 197 12267 12311 C 45 97.78 299 reject_low 15 ALIGNMENT 24 YS2-13m09.p1k chrm 60 88 71333 71361 F 29 100.00 297 reject_low 9 ALIGNMENT 0 YS2-13m09.q1k chrm 299 242 12268 12267 C 58 0.00 299 reject_low 15 ALIGNMENT 31 YS2-13m09.p1k chrm 77 124 71212 71260 F 48 89.58 297|0,6 reject_bad_break 0 reject_low 7 ALIGNMENT 0 YS2-13m09.q1k vc_4 62 258 5831 5830 F 197 0.00 299 reject_vc 5 ALIGNMENT 0 YS2-13m09.q1k chrm 196 62 12312 12311 C 135 0.00 299 reject_low 15 ALIGNMENT 41 YS2-13m09.q1k chrm 255 198 52316 52373 C 58 91.38 299 reject_low 11 ALIGNMENT 41 YS2-13m09.q1k vc_1 299 259 2472 2512 C 41 100.00 299 reject_vc 2 ALIGNMENT 0 YS2-13m09.q1k chrm 62 197 73011 73010 F 136 0.00 299 reject_low 13 ALIGNMENT 41 YS2-13m09.q1k vc_4 259 299 5831 5871 F 41 100.00 299 reject_vc 5 ALIGNMENT 0 YS2-13m09.p1k chrm 297 126 69439 69438 C 172 0.00 297 reject_low 10 ALIGNMENT 135 YS2-13m09.q1k chrm 205 39 71358 71524 C 167 97.60 299|6,0 reject_bad_break 1 ALIGNMENT 36 YS2-13m09.p1k chrm 125 69 69438 69496 C 57 89.47 297 reject_low 10 ALIGNMENT 0 YS2-13m09.q1k vc_2 258 62 2146 2145 C 197 0.00 299 reject_vc 3 ALIGNMENT 0 YS2-13m09.q1k chrm 299 256 52317 52316 C 44 0.00 299 reject_low 11 ALIGNMENT 0 YS2-13m09.p1k chrm 279 297 71524 71523 F 19 0.00 297 reject_bad_break 0 ALIGNMENT 24 YS2-13m09.q1k chrm 258 230 71333 71361 C 29 100.00 299 reject_low 7 ALIGNMENT 38 YS2-13m09.q1k vc_7 262 299 13525 13562 F 38 100.00 299 reject_vc 6 ALIGNMENT 0 YS2-13m09.p1k chrm 119 118 71255 71364 F 0 0.00 297 reject_bad_break 0 ALIGNMENT 0 YS2-13m09.q1k chrm 192 62 132 131 C 131 0.00 299 reject_low 14 ALIGNMENT 44 YS2-13m09.q1k chrm 192 249 69438 69496 F 58 93.10 299 reject_low 12 ALIGNMENT 0 YS2-13m09.q1k chrm 199 200 71254 71363 C 0 0.00 299 reject_bad_break 1 ALIGNMENT 0 YS2-13m09.q1k chrm 62 191 3054 3053 F 130 0.00 299 reject_low 8 ALIGNMENT 38 YS2-13m09.q1k chrm 192 239 3054 3101 F 48 93.75 299 reject_low 8 ALIGNMENT 0 YS2-13m09.q1k vc_1 258 62 2513 2512 C 197 0.00 299 reject_vc 2 ALIGNMENT 0 YS2-13m09.q1k chrm 299 259 71334 71333 C 41 0.00 299 reject_low 7 ALIGNMENT 28 YS2-13m09.p1k chrm 120 69 11046 11098 C 52 86.54 297 reject_low 8 ALIGNMENT 41 YS2-13m09.q1k vc_3 299 259 2472 2512 C 41 100.00 299 reject_vc 4 ALIGNMENT 42 YS2-13m09.q1k chrm 247 193 77 131 C 55 92.73 299 reject_low 14 ALIGNMENT 0 YS2-13m09.p1k chrm 125 297 71260 71259 F 173 0.00 297 reject_low 7 ALIGNMENT 146 YS2-13m09.p1k chrm 112 278 71358 71524 F 167 100.00 297|7,0 reject_bad_break 0 ALIGNMENT 0 YS2-13m09.q1k chrm 250 299 69496 69495 F 50 0.00 299 reject_low 12 ALIGNMENT 0 YS2-13m09.q1k chrm 197 62 52374 52373 C 136 0.00 299 reject_low 11 ALIGNMENT 41 YS2-13m09.q1k vc_2 299 259 2105 2145 C 41 100.00 299 reject_vc 3 ALIGNMENT 0 YS2-13m09.q1k chrm 229 62 71362 71361 C 168 0.00 299 reject_low 7 ALIGNMENT 0 YS2-13m09.p1k chrm 297 121 11047 11046 C 177 0.00 297 reject_low 8 ALIGNMENT 0 YS2-13m09.q1k vc_3 258 62 2513 2512 C 197 0.00 299 reject_vc 4 ALIGNMENT 0 YS2-13m09.q1k chrm 256 299 73066 73065 F 44 0.00 299 reject_low 13 ALIGNMENT 0 YS2-13m09.q1k vc_7 62 261 13525 13524 F 200 0.00 299 reject_vc 6 ALIGNMENT 0 YS2-13m09.q1k chrm 299 248 78 77 C 52 0.00 299 reject_low 14 ALIGNMENT 0 YS2-13m09.q1k chrm 240 299 3101 3100 F 60 0.00 299 reject_low 8 ALIGNMENT 0 YS2-13m09.p1k chrm 89 297 71361 71360 F 209 0.00 297 reject_low 9 ALIGNMENT 39 YS2-13m09.q1k chrm 241 193 71212 71260 C 49 93.88 299|0,7 reject_bad_break 1 ALIGNMENT 0 YS2-13m09.q1k chrm 299 242 71213 71212 C 58 0.00 299 reject_bad_break 1 ALIGNMENT 944 YS2-13m10.q1k chr13 1103 38 746680 747763 C 1066 97.00 1335 accept 0 ALIGNMENT 976 YS2-13m11.q1k chr03 1130 30 136639 137739 C 1101 96.73 1378 accept 0 ALIGNMENT 917 YS2-13m11.p1k chr03 34 1172 131731 132881 F 1139 94.29 1188 accept 0 ALIGNMENT 844 YS2-13m12.q1k chr14 1035 38 222521 223531 C 998 96.99 1352 accept 0 ALIGNMENT 960 YS2-13m12.p1k chr14 224 1388 221628 222807 F 1165 95.71 1417 accept 0 ALIGNMENT 0 YS2-13m13.q1k vc_4 62 305 5831 5830 F 244 0.00 346 reject_low 4 ALIGNMENT 38 YS2-13m13.q1k vc_7 309 346 13525 13562 F 38 100.00 346 reject_low 6 ALIGNMENT 270 YS2-13m13.p1k chr05 309 31 314987 315265 C 279 99.28 325 accept_chi 0 ALIGNMENT 0 YS2-13m13.q1k vc_5 307 62 5064 5063 C 246 0.00 346 reject_low 5 ALIGNMENT 0 YS2-13m13.p1k chr05 325 310 314988 314987 C 16 0.00 325 accept_chi 0 ALIGNMENT 0 YS2-13m13.q1k chr05 307 346 315268 315267 F 40 0.00 346 accept_chi 1 ALIGNMENT 36 YS2-13m13.q1k vc_5 343 308 1 36 C 36 100.00 346 reject_low 7 ALIGNMENT 264 YS2-13m13.q1k chr05 26 306 314987 315268 F 281 98.58 346 accept_chi 1 ALIGNMENT 41 YS2-13m13.q1k vc_3 346 306 2472 2512 C 41 100.00 346 reject_low 3 ALIGNMENT 39 YS2-13m13.q1k vc_5 346 308 5025 5063 C 39 100.00 346 reject_low 5 ALIGNMENT 0 YS2-13m13.q1k vc_5 307 62 37 36 C 246 0.00 346 reject_low 7 ALIGNMENT 0 YS2-13m13.q1k vc_7 62 308 13525 13524 F 247 0.00 346 reject_low 6 ALIGNMENT 41 YS2-13m13.q1k vc_4 306 346 5831 5871 F 41 100.00 346 reject_low 4 ALIGNMENT 41 YS2-13m13.q1k vc_1 346 306 2472 2512 C 41 100.00 346 reject_low 2 ALIGNMENT 0 YS2-13m13.q1k vc_3 305 62 2513 2512 C 244 0.00 346 reject_low 3 ALIGNMENT 0 YS2-13m13.q1k vc_1 305 62 2513 2512 C 244 0.00 346 reject_low 2 ALIGNMENT 955 YS2-13m14.q1k chr04 1227 42 243203 244389 C 1186 94.52 1401 accept 0 ALIGNMENT 0 YS2-13m15.p1k chr13 276 259 879460 879459 C 18 0.00 276 accept_chi 1 ALIGNMENT 0 YS2-13m15.q1k vc_3 231 62 2513 2512 C 170 0.00 272 reject_low 4 ALIGNMENT 41 YS2-13m15.q1k vc_2 272 232 2105 2145 C 41 100.00 272 reject_low 3 ALIGNMENT 38 YS2-13m15.q1k vc_7 235 272 13525 13562 F 38 100.00 272 reject_low 7 ALIGNMENT 41 YS2-13m15.q1k vc_4 232 272 5831 5871 F 41 100.00 272 reject_low 5 ALIGNMENT 0 YS2-13m15.q1k vc_1 231 62 2513 2512 C 170 0.00 272 reject_low 2 ALIGNMENT 0 YS2-13m15.q1k vc_7 62 234 13525 13524 F 173 0.00 272 reject_low 7 ALIGNMENT 0 YS2-13m15.q1k vc_2 231 62 2146 2145 C 170 0.00 272 reject_low 3 ALIGNMENT 0 YS2-13m15.q1k vc_5 233 62 37 36 C 172 0.00 272 reject_low 8 ALIGNMENT 0 YS2-13m15.q1k chr13 232 272 879653 879652 F 41 0.00 272 accept_chi 0 ALIGNMENT 175 YS2-13m15.p1k chr13 258 64 879459 879651 C 195 97.44 276 accept_chi 1 ALIGNMENT 191 YS2-13m15.q1k chr13 37 231 879459 879653 F 195 99.49 272 accept_chi 0 ALIGNMENT 0 YS2-13m15.q1k vc_4 62 231 5831 5830 F 170 0.00 272 reject_low 5 ALIGNMENT 0 YS2-13m15.q1k vc_5 233 62 5064 5063 C 172 0.00 272 reject_low 6 ALIGNMENT 41 YS2-13m15.q1k vc_1 272 232 2472 2512 C 41 100.00 272 reject_low 2 ALIGNMENT 41 YS2-13m15.q1k vc_3 272 232 2472 2512 C 41 100.00 272 reject_low 4 ALIGNMENT 39 YS2-13m15.q1k vc_5 272 234 5025 5063 C 39 100.00 272 reject_low 6 ALIGNMENT 36 YS2-13m15.q1k vc_5 269 234 1 36 C 36 100.00 272 reject_low 8 ALIGNMENT 845 YS2-13m17.q1k chr12 41 1034 547562 548570 F 994 96.28 1251 accept 0 ALIGNMENT 990 YS2-13m17.p1k chr12 1159 34 548062 549188 C 1126 96.80 1161 accept 0 ALIGNMENT 990 YS2-13m18.q1k chr02 41 1170 737790 738932 F 1130 96.02 1381 accept 0 ALIGNMENT 0 YS2-13m19.p1k chr12 949 918 451556 451600 C 32 0.00 1178 reject_low 2 ALIGNMENT 24 YS2-13m19.p1k chr12 1067 950 451439 451555 C 118 76.27 1178 reject_low 2 ALIGNMENT 786 YS2-13m19.q1k chr12 29 1138 457961 459033 F 1110 91.62 1302 reject_bad_break 0 ALIGNMENT 825 YS2-13m19.p1k chr12 917 60 460738 461595 C 858 98.95 1178 reject_bad_break 0 ALIGNMENT 786 YS2-13m19.q1k chr12 29 1138 467098 468170 F 1110 91.62 1302 reject_low 1 ALIGNMENT 0 YS2-13m19.p1k chr12 949 918 460693 460737 C 32 0.00 1178 reject_bad_break 0 ALIGNMENT 825 YS2-13m19.p1k chr12 917 60 451601 452458 C 858 98.95 1178 reject_low 2 ALIGNMENT 636 YS2-13m19.p1k chr12 731 60 489754 490426 C 672 98.36 1178 reject_low 3 ALIGNMENT 24 YS2-13m19.p1k chr12 1067 950 460576 460692 C 118 76.27 1178 reject_bad_break 0 ALIGNMENT 0 YS2-13m19.p1k chr12 841 732 489755 489754 C 110 0.00 1178 reject_low 3 ALIGNMENT 0 YS2-13m20.q1k vc_5 282 62 37 36 C 221 0.00 321 reject_low 7 ALIGNMENT 247 YS2-13m20.p1k chr12 279 27 340070 340323 C 253 99.60 297 accept_chi 1 ALIGNMENT 0 YS2-13m20.q1k vc_7 62 283 13525 13524 F 222 0.00 321 reject_low 6 ALIGNMENT 0 YS2-13m20.q1k vc_3 281 62 2512 2511 C 220 0.00 321 reject_low 3 ALIGNMENT 0 YS2-13m20.q1k chr12 283 321 340323 340322 F 39 0.00 321 accept_chi 0 ALIGNMENT 0 YS2-13m20.q1k vc_5 282 62 5064 5063 C 221 0.00 321 reject_low 5 ALIGNMENT 0 YS2-13m20.q1k vc_4 62 281 5832 5831 F 220 0.00 321 reject_low 4 ALIGNMENT 0 YS2-13m20.p1k chr12 297 280 340071 340070 C 18 0.00 297 accept_chi 1 ALIGNMENT 252 YS2-13m20.q1k chr12 29 282 340070 340323 F 254 100.00 321 accept_chi 0 ALIGNMENT 39 YS2-13m20.q1k vc_5 321 283 5025 5063 C 39 100.00 321 reject_low 5 ALIGNMENT 40 YS2-13m20.q1k vc_3 321 282 2472 2511 C 40 100.00 321 reject_low 3 ALIGNMENT 40 YS2-13m20.q1k vc_1 321 282 2472 2511 C 40 100.00 321 reject_low 2 ALIGNMENT 0 YS2-13m20.q1k vc_1 281 62 2512 2511 C 220 0.00 321 reject_low 2 ALIGNMENT 36 YS2-13m20.q1k vc_5 318 283 1 36 C 36 100.00 321 reject_low 7 ALIGNMENT 38 YS2-13m20.q1k vc_7 284 321 13525 13562 F 38 100.00 321 reject_low 6 ALIGNMENT 40 YS2-13m20.q1k vc_4 282 321 5832 5871 F 40 100.00 321 reject_low 4 ALIGNMENT 252 YS2-13m22.q1k chr04 1106 674 520 954 C 433 87.76 1327 reject_low 27 ALIGNMENT 0 YS2-13m22.q1k chr15 890 227 11053 11052 C 664 0.00 1327 reject_low 25 ALIGNMENT 39 YS2-13m22.q1k chr16 124 54 7531 7604 C 71 85.92 1327 reject_low 13 ALIGNMENT 1015 YS2-13m22.p1k chr10 32 1177 2654 3801 F 1146 96.60 1191 ambiguous_tel 4 ALIGNMENT 308 YS2-13m22.q1k chr03 534 1097 315587 316152 F 564 85.99 1327 reject_low 23 ALIGNMENT 0 YS2-13m22.q1k chr15 533 62 1040 1039 C 472 0.00 1327 reject_low 22 ALIGNMENT 0 YS2-13m22.q1k chr11 588 725 665549 665542 F 138 0.00 1327 reject_low 28 ALIGNMENT 260 YS2-13m22.q1k chr14 1036 675 7116 7478 C 362 92.54 1327 reject_low 18 ALIGNMENT 346 YS2-13m22.q1k chr15 1111 534 460 1039 C 578 87.89 1327 reject_low 22 ALIGNMENT 1029 YS2-13m22.p1k chr08 1175 30 558985 560133 C 1146 97.03 1191 reject_low 14 ALIGNMENT 1021 YS2-13m22.p1k chr06 32 1177 1537 2684 F 1146 96.77 1191 reject_low 16 ALIGNMENT 0 YS2-13m22.q1k chr15 62 529 1083721 1083720 F 468 0.00 1327 reject_low 9 ALIGNMENT 635 YS2-13m22.q1k chr04 36 1111 1523911 1525001 F 1076 87.64 1327 ambiguous_tel 7 ALIGNMENT 0 YS2-13m22.q1k chr03 645 62 1179 1178 C 584 0.00 1327 reject_low 24 ALIGNMENT 678 YS2-13m22.q1k chr09 1111 33 7393 8480 C 1079 88.88 1327 ambiguous_tel 3 ALIGNMENT 261 YS2-13m22.q1k chr08 1125 675 5095 5554 C 451 87.58 1327 reject_low 10 ALIGNMENT 312 YS2-13m22.q1k chr03 1111 646 711 1178 C 466 90.13 1327 reject_low 24 ALIGNMENT 269 YS2-13m22.q1k chr10 674 1111 744767 745205 F 438 88.58 1327 reject_low 26 ALIGNMENT 1021 YS2-13m22.p1k chr13 32 1177 2376 3523 F 1146 96.77 1191 reject_low 17 ALIGNMENT 337 YS2-13m22.q1k chr05 581 1111 569450 569984 F 531 89.27 1327 reject_low 8 ALIGNMENT 1021 YS2-13m22.p1k chr12 1175 30 1068172 1069319 C 1146 96.77 1191 ambiguous_tel 6 ALIGNMENT 1026 YS2-13m22.p1k chr12 30 1177 2498 3647 F 1148 96.86 1191 ambiguous_tel 0 ALIGNMENT 153 YS2-13m22.q1k chr15 226 33 11052 11246 C 194 93.81 1327 reject_low 25 ALIGNMENT 1026 YS2-13m22.p1k chr12 30 1177 8033 9182 F 1148 96.86 1191 ambiguous_tel 1 ALIGNMENT 238 YS2-13m22.q1k chr11 726 1111 665543 665931 F 386 88.86 1327 reject_low 28 ALIGNMENT 0 YS2-13m22.q1k chr14 1065 1037 7082 7115 C 29 0.00 1327 reject_low 18 ALIGNMENT 0 YS2-13m22.q1k chr08 674 62 5555 5554 C 613 0.00 1327 reject_low 10 ALIGNMENT 1023 YS2-13m22.p1k chr15 1177 30 1087797 1088946 C 1148 96.78 1191 reject_low 9 ALIGNMENT 983 YS2-13m22.p1k chr08 38 1177 2235 3379 F 1140 95.88 1191 reject_low 10 ALIGNMENT 1014 YS2-13m22.p1k chr09 30 1177 2669 3818 F 1148 96.52 1191 ambiguous_tel 3 ALIGNMENT 323 YS2-13m22.q1k chr16 1111 530 6835 7420 C 582 86.25 1327 reject_low 13 ALIGNMENT 0 YS2-13m22.q1k chr10 62 673 744767 744766 F 612 0.00 1327 reject_low 26 ALIGNMENT 1029 YS2-13m22.p1k chr02 30 1175 2698 3846 F 1146 97.03 1191 ambiguous_tel 2 ALIGNMENT 1023 YS2-13m22.p1k chr16 30 1177 2190 3339 F 1148 96.78 1191 reject_low 13 ALIGNMENT 648 YS2-13m22.q1k chr12 33 1111 1063581 1064671 F 1079 88.04 1327 ambiguous_tel 5,6 ALIGNMENT 756 YS2-13m22.q1k chr12 1111 33 11697 12778 C 1079 91.29 1327 ambiguous_tel 0,1 ALIGNMENT 1010 YS2-13m22.p1k chr05 32 1185 2347 3503 F 1154 96.27 1191 reject_low 12 ALIGNMENT 274 YS2-13m22.q1k chr07 674 1111 1083590 1084027 F 438 89.27 1327 reject_low 11 ALIGNMENT 0 YS2-13m22.q1k chr14 674 62 7479 7478 C 613 0.00 1327 reject_low 18 ALIGNMENT 0 YS2-13m22.q1k chr05 62 580 569450 569449 F 519 0.00 1327 reject_low 8 ALIGNMENT 726 YS2-13m22.q1k chr14 33 1097 782585 783656 F 1065 90.80 1327 reject_low 20 ALIGNMENT 323 YS2-13m22.q1k chr15 530 1111 1083721 1084306 F 582 86.25 1327 reject_low 9 ALIGNMENT 208 YS2-13m22.q1k chr11 346 587 665307 665548 F 242 95.87 1327 reject_low 28 ALIGNMENT 1023 YS2-13m22.p1k chr04 1177 30 1528632 1529781 C 1148 96.78 1191 ambiguous_tel 7 ALIGNMENT 0 YS2-13m22.q1k chr16 529 125 7421 7530 C 405 0.00 1327 reject_low 13 ALIGNMENT 26 YS2-13m22.q1k chr14 1111 1066 7035 7081 C 46 86.96 1327 reject_low 18 ALIGNMENT 1023 YS2-13m22.p1k chr14 30 1177 2281 3430 F 1148 96.78 1191 reject_low 18 ALIGNMENT 1023 YS2-13m22.p1k chr07 1177 30 1087538 1088687 C 1148 96.78 1191 reject_low 11 ALIGNMENT 675 YS2-13m22.q1k chr10 1111 33 7376 8463 C 1079 88.79 1327 ambiguous_tel 4 ALIGNMENT 0 YS2-13m22.q1k chr03 62 533 315587 315586 F 472 0.00 1327 reject_low 23 ALIGNMENT 662 YS2-13m22.q1k chr01 1111 33 407 1497 C 1079 88.23 1327 reject_low 21 ALIGNMENT 1023 YS2-13m22.p1k chr05 1177 30 573461 574610 C 1148 96.78 1191 reject_low 8 ALIGNMENT 1026 YS2-13m22.p1k chr16 1177 30 944530 945679 C 1148 96.86 1191 reject_low 15 ALIGNMENT 0 YS2-13m22.q1k chr04 673 62 955 954 C 612 0.00 1327 reject_low 27 ALIGNMENT 731 YS2-13m22.q1k chr11 1111 33 423 1501 C 1079 90.55 1327 reject_low 19 ALIGNMENT 0 YS2-13m22.q1k chr07 62 673 1083590 1083589 F 612 0.00 1327 reject_low 11 ALIGNMENT 1023 YS2-13m22.p1k chr12 1177 30 1074833 1075982 C 1148 96.78 1191 ambiguous_tel 5 ALIGNMENT 694 YS2-13m22.q1k chr02 1111 33 6213 7300 C 1079 89.53 1327 ambiguous_tel 2 ALIGNMENT 0 YS2-13m22.q1k chr11 62 345 665307 665306 F 284 0.00 1327 reject_low 28 ALIGNMENT 0 YS2-13m24.q1k vc_4 41 575 5835 5832 F 535 0.00 614 reject_low 8 ALIGNMENT 20 YS2-13m24.q1k vc_3 40 18 2509 2531 C 23 95.65 614 reject_low 7 ALIGNMENT 20 YS2-13m24.q1k vc_4 18 40 5812 5834 F 23 95.65 614 reject_low 8 ALIGNMENT 39 YS2-13m24.q1k vc_5 614 576 5025 5063 C 39 100.00 614 reject_low 2 ALIGNMENT 0 YS2-13m24.q1k vc_5 575 62 37 36 C 514 0.00 614 reject_low 4 ALIGNMENT 39 YS2-13m24.q1k vc_4 576 614 5833 5871 F 39 100.00 614 reject_low 8 ALIGNMENT 39 YS2-13m24.q1k vc_2 614 576 2105 2143 C 39 100.00 614 reject_low 6 ALIGNMENT 20 YS2-13m24.q1k vc_2 40 18 2142 2164 C 23 95.65 614 reject_low 6 ALIGNMENT 0 YS2-13m24.q1k vc_3 575 41 2511 2508 C 535 0.00 614 reject_low 7 ALIGNMENT 0 YS2-13m24.q1k vc_7 62 576 13525 13524 F 515 0.00 614 reject_low 3 ALIGNMENT 0 YS2-13m24.p1k chr14 585 567 420365 420364 C 19 0.00 585 accept_chi 1 ALIGNMENT 0 YS2-13m24.q1k chr14 576 614 420903 420902 F 39 0.00 614 accept_chi 0 ALIGNMENT 36 YS2-13m24.q1k vc_5 611 576 1 36 C 36 100.00 614 reject_low 4 ALIGNMENT 20 YS2-13m24.q1k vc_1 40 18 2509 2531 C 23 95.65 614 reject_low 5 ALIGNMENT 39 YS2-13m24.q1k vc_1 614 576 2472 2510 C 39 100.00 614 reject_low 5 ALIGNMENT 0 YS2-13m24.q1k vc_2 575 41 2144 2141 C 535 0.00 614 reject_low 6 ALIGNMENT 0 YS2-13m24.q1k vc_5 575 62 5064 5063 C 514 0.00 614 reject_low 2 ALIGNMENT 0 YS2-13m24.q1k vc_1 575 41 2511 2508 C 535 0.00 614 reject_low 5 ALIGNMENT 514 YS2-13m24.p1k chr14 566 27 420364 420903 C 540 99.81 585 accept_chi 1 ALIGNMENT 38 YS2-13m24.q1k vc_7 577 614 13525 13562 F 38 100.00 614 reject_low 3 ALIGNMENT 39 YS2-13m24.q1k vc_3 614 576 2472 2510 C 39 100.00 614 reject_low 7 ALIGNMENT 517 YS2-13m24.q1k chr14 36 575 420364 420903 F 540 100.00 614 accept_chi 0 ALIGNMENT 980 YS2-13n01.p1k chr12 1142 27 454999 456115 C 1116 96.51 1151 accept 0 ALIGNMENT 1004 YS2-13n01.q1k chr12 28 1162 463094 464245 F 1135 96.92 1332 accept 1 ALIGNMENT 1004 YS2-13n01.q1k chr12 28 1162 453957 455108 F 1135 96.92 1332 accept 0 ALIGNMENT 980 YS2-13n01.p1k chr12 1142 27 464136 465252 C 1116 96.51 1151 accept 1 ALIGNMENT 957 YS2-13n02.p1k chr04 31 1140 158086 159196 F 1110 95.68 1155 accept 0 ALIGNMENT 966 YS2-13n02.q1k chr04 1244 37 161299 162505 C 1208 93.79 1367 accept 0 ALIGNMENT 0 YS2-13n04.p1k chr12 62 189 720822 720821 F 128 0.00 1192 reject_low 1 ALIGNMENT 290 YS2-13n04.p1k chr12 190 773 720822 721405 F 584 83.73 1192 reject_low 1 ALIGNMENT 967 YS2-13n04.q1k chr15 1165 38 684583 685724 C 1128 95.48 1355 accept 0 ALIGNMENT 0 YS2-13n04.p1k chr12 774 863 721405 721404 F 90 0.00 1192 reject_low 1 ALIGNMENT 1009 YS2-13n04.p1k chr15 32 1166 681335 682479 F 1135 96.83 1192 accept 0 ALIGNMENT 926 YS2-13n05.p1k chr05 50 1220 21626 22793 F 1171 93.42 1235 accept 0 ALIGNMENT 800 YS2-13n05.p1k chr04 50 1220 11746 12913 F 1171 89.84 1235 reject_low 2 ALIGNMENT 969 YS2-13n05.q1k chr05 1188 29 23745 24921 C 1160 95.86 1369 accept 0 ALIGNMENT 794 YS2-13n05.p1k chr10 1220 50 732802 733969 C 1171 89.67 1235 reject_low 3 ALIGNMENT 920 YS2-13n05.p1k chr14 1220 50 773095 774262 C 1171 93.25 1235 reject_low 1 ALIGNMENT 941 YS2-13n07.q1k chr04 44 1155 448640 449760 F 1112 96.49 1372 accept 0 ALIGNMENT 102 YS2-13n08.q1k chr07 1205 956 817475 817729 C 250 85.20 1407 reject_low 31 ALIGNMENT 425 YS2-13n08.p1k chr15 655 28 120767 121405 C 628 90.45 894 reject_low 5 ALIGNMENT 0 YS2-13n08.q1k chr03 955 62 124463 124462 C 894 0.00 1407 reject_low 37 ALIGNMENT 72 YS2-13n08.q1k chr13 956 1205 196332 196591 F 250 79.60 1407 reject_low 42 ALIGNMENT 99 YS2-13n08.q1k chr07 956 1205 535215 535469 F 250 84.80 1407 reject_low 2 ALIGNMENT 895 YS2-13n08.q1k chr11 955 41 47002 47916 C 915 99.78 1407 accept 0 ALIGNMENT 88 YS2-13n08.q1k chr04 1205 956 877785 878039 C 250 83.60 1407 reject_low 38 ALIGNMENT 0 YS2-13n08.q1k chr14 955 62 96942 96941 C 894 0.00 1407 reject_low 32 ALIGNMENT 98 YS2-13n08.q1k chr02 956 1204 221040 221293 F 249 84.74 1407 reject_low 7 ALIGNMENT 83 YS2-13n08.q1k chr05 1092 956 492691 492828 C 137 90.51 1407 reject_low 41 ALIGNMENT 0 YS2-13n08.q1k chr04 955 62 513587 513586 C 894 0.00 1407 reject_low 40 ALIGNMENT 0 YS2-13n08.q1k chr03 950 62 143084 143083 C 889 0.00 1407 reject_low 39 ALIGNMENT 0 YS2-13n08.q1k chr04 955 62 878040 878039 C 894 0.00 1407 reject_low 38 ALIGNMENT 425 YS2-13n08.p1k chr13 28 641 374918 375540 F 614 90.88 894 reject_low 6 ALIGNMENT 80 YS2-13n08.q1k chr03 1179 951 142852 143083 C 229 83.41 1407 reject_low 39 ALIGNMENT 99 YS2-13n08.q1k chr13 1205 956 357081 357335 C 250 84.80 1407 reject_low 34 ALIGNMENT 448 YS2-13n08.p1k chr13 22 708 359213 359912 F 687 89.23 894 reject_low 1 ALIGNMENT 437 YS2-13n08.p1k chr02 655 22 224101 224746 C 634 90.69 894 reject_low 7 ALIGNMENT 0 YS2-13n08.q1k chr11 955 62 458115 458114 C 894 0.00 1407 reject_low 36 ALIGNMENT 128 YS2-13n08.q1k chr13 1205 956 372773 373033 C 250 87.60 1407 reject_low 1 ALIGNMENT 99 YS2-13n08.q1k chr13 1205 956 362663 362917 C 250 84.80 1407 reject_low 35 ALIGNMENT 0 YS2-13n08.q1k chr14 954 62 102525 102524 C 893 0.00 1407 reject_low 29 ALIGNMENT 0 YS2-13n08.q1k chr16 955 62 856551 856550 C 894 0.00 1407 reject_low 25 ALIGNMENT 0 YS2-13n08.q1k chr13 955 62 362918 362917 C 894 0.00 1407 reject_low 35 ALIGNMENT 99 YS2-13n08.q1k chr08 1205 956 116493 116747 C 250 84.80 1407 reject_low 33 ALIGNMENT 0 YS2-13n08.q1k chr05 955 62 492829 492828 C 894 0.00 1407 reject_low 41 ALIGNMENT 0 YS2-13n08.q1k chr15 62 952 117699 117698 F 891 0.00 1407 reject_low 5 ALIGNMENT 434 YS2-13n08.p1k chr15 708 28 597826 598518 C 681 88.99 894 reject_low 19 ALIGNMENT 102 YS2-13n08.q1k chr13 956 1205 189752 190006 F 250 85.20 1407 reject_low 10 ALIGNMENT 128 YS2-13n08.q1k chr16 1205 956 850702 850962 C 250 87.60 1407 reject_low 24 ALIGNMENT 0 YS2-13n08.q1k chr02 62 955 221040 221039 F 894 0.00 1407 reject_low 7 ALIGNMENT 434 YS2-13n08.p1k chr12 28 708 478196 478888 F 681 88.69 894 reject_low 17 ALIGNMENT 434 YS2-13n08.p1k chr16 708 28 847422 848114 C 681 88.99 894 reject_low 21 ALIGNMENT 0 YS2-13n08.q1k chr16 955 62 850963 850962 C 894 0.00 1407 reject_low 24 ALIGNMENT 0 YS2-13n08.q1k chr07 62 955 535215 535214 F 894 0.00 1407 reject_low 2 ALIGNMENT 0 YS2-13n08.q1k chr13 62 955 184170 184169 F 894 0.00 1407 reject_low 9 ALIGNMENT 88 YS2-13n08.q1k chr03 1205 956 124208 124462 C 250 83.20 1407 reject_low 37 ALIGNMENT 425 YS2-13n08.p1k chr10 655 28 481026 481664 C 628 90.45 894 reject_low 22 ALIGNMENT 0 YS2-13n08.q1k chr13 62 955 189752 189751 F 894 0.00 1407 reject_low 10 ALIGNMENT 105 YS2-13n08.q1k chr07 956 1205 401962 402216 F 250 85.60 1407 reject_low 28 ALIGNMENT 0 YS2-13n08.q1k chr11 953 62 517429 517428 C 892 0.00 1407 reject_low 30 ALIGNMENT 101 YS2-13n08.q1k chr11 1205 954 517172 517428 C 252 84.92 1407 reject_low 30 ALIGNMENT 434 YS2-13n08.p1k chr16 708 28 59462 60154 C 681 88.99 894 reject_low 20 ALIGNMENT 0 YS2-13n08.q1k chr13 62 955 196332 196331 F 894 0.00 1407 reject_low 42 ALIGNMENT 92 YS2-13n08.q1k chr11 1173 956 457896 458114 C 218 85.78 1407 reject_low 36 ALIGNMENT 434 YS2-13n08.p1k chr01 28 708 162460 163152 F 681 88.69 894 reject_low 11 ALIGNMENT 0 YS2-13n08.q1k chr07 955 62 817730 817729 C 894 0.00 1407 reject_low 31 ALIGNMENT 0 YS2-13n08.q1k chr13 955 62 373034 373033 C 894 0.00 1407 reject_low 1 ALIGNMENT 0 YS2-13n08.q1k chr10 62 954 472376 472375 F 893 0.00 1407 reject_low 4 ALIGNMENT 425 YS2-13n08.p1k chr05 28 641 445614 446236 F 614 90.88 894 reject_low 23 ALIGNMENT 0 YS2-13n08.q1k chr07 62 950 931686 931685 F 889 0.00 1407 reject_low 27 ALIGNMENT 434 YS2-13n08.p1k chr07 28 708 564065 564757 F 681 88.69 894 reject_low 16 ALIGNMENT 0 YS2-13n08.q1k chr13 62 955 201919 201918 F 894 0.00 1407 reject_low 43 ALIGNMENT 431 YS2-13n08.p1k chr10 655 28 475442 476080 C 628 90.76 894 reject_low 4 ALIGNMENT 425 YS2-13n08.p1k chr13 655 28 187229 187867 C 628 90.45 894 reject_low 9 ALIGNMENT 0 YS2-13n08.q1k chr08 955 62 116748 116747 C 894 0.00 1407 reject_low 33 ALIGNMENT 0 YS2-13n08.q1k chr13 952 62 378625 378624 C 891 0.00 1407 reject_low 6 ALIGNMENT 102 YS2-13n08.q1k chr14 1205 956 96687 96941 C 250 85.20 1407 reject_low 32 ALIGNMENT 127 YS2-13n08.q1k chr10 955 1205 472376 472637 F 251 87.25 1407 reject_low 4 ALIGNMENT 466 YS2-13n08.p1k chr07 22 708 819607 820306 F 687 90.10 894 reject_low 3 ALIGNMENT 434 YS2-13n08.p1k chr12 708 28 653835 654527 C 681 88.99 894 reject_low 18 ALIGNMENT 434 YS2-13n08.p1k chr07 708 28 538775 539467 C 681 88.99 894 reject_low 2 ALIGNMENT 25 YS2-13n08.q1k chr14 956 986 102549 102580 F 31 93.55 1407 reject_low 44 ALIGNMENT 434 YS2-13n08.p1k chr04 28 708 647715 648407 F 681 88.69 894 reject_low 12 ALIGNMENT 104 YS2-13n08.q1k chr14 1205 955 102269 102524 C 251 85.26 1407 reject_low 29 ALIGNMENT 0 YS2-13n08.q1k chr14 62 955 102549 102548 F 894 0.00 1407 reject_low 44 ALIGNMENT 82 YS2-13n08.q1k chr04 1205 956 513332 513586 C 250 82.40 1407 reject_low 40 ALIGNMENT 0 YS2-13n08.q1k chr10 62 955 483549 483548 F 894 0.00 1407 reject_low 26 ALIGNMENT 425 YS2-13n08.p1k chr13 655 28 199396 200034 C 628 90.45 894 reject_low 10 ALIGNMENT 104 YS2-13n08.q1k chr07 951 1205 931686 931945 F 255 85.10 1407 reject_low 27 ALIGNMENT 72 YS2-13n08.q1k chr13 956 1205 201919 202178 F 250 79.60 1407 reject_low 43 ALIGNMENT 102 YS2-13n08.q1k chr13 956 1205 184170 184424 F 250 85.20 1407 reject_low 9 ALIGNMENT 0 YS2-13n08.q1k chr07 62 955 401962 401961 F 894 0.00 1407 reject_low 28 ALIGNMENT 439 YS2-13n08.p1k chr05 22 708 494706 495405 F 687 88.79 894 reject_low 8 ALIGNMENT 434 YS2-13n08.p1k chr04 708 28 1209701 1210393 C 681 88.99 894 reject_low 15 ALIGNMENT 128 YS2-13n08.q1k chr16 1205 956 856290 856550 C 250 87.60 1407 reject_low 25 ALIGNMENT 0 YS2-13n08.q1k chr13 955 62 357336 357335 C 894 0.00 1407 reject_low 34 ALIGNMENT 131 YS2-13n08.q1k chr15 953 1205 117699 117962 F 253 87.75 1407 reject_low 5 ALIGNMENT 131 YS2-13n08.q1k chr13 1205 953 378361 378624 C 253 87.75 1407 reject_low 6 ALIGNMENT 434 YS2-13n08.p1k chr04 708 28 1098773 1099465 C 681 88.99 894 reject_low 14 ALIGNMENT 125 YS2-13n08.q1k chr10 956 1205 483549 483809 F 250 87.20 1407 reject_low 26 ALIGNMENT 434 YS2-13n08.p1k chr04 28 708 988937 989629 F 681 88.69 894 reject_low 13 ALIGNMENT 831 YS2-13n09.q1k chr03 33 1034 98960 99976 F 1002 95.21 1309 accept 0 ALIGNMENT 944 YS2-13n10.q1k chr07 39 1174 959807 960960 F 1136 95.16 1368 accept 0 ALIGNMENT 547 YS2-13n10.p1k chr07 1032 26 962796 963844 C 1007 86.69 1087 accept 0 ALIGNMENT 929 YS2-13n11.q1k chr04 40 1169 1397761 1398898 F 1130 94.87 1411 accept 0 ALIGNMENT 953 YS2-13n11.p1k chr04 1193 27 1398302 1399488 C 1167 95.37 1220 accept 0 ALIGNMENT 28 YS2-13n13.q1k vc_4 236 270 1548 1583 F 35 94.29 619 reject_vc 11 ALIGNMENT 31 YS2-13n13.q1k vc_4 300 400 1879 1990 F 101 81.19 619 reject_vc 11 ALIGNMENT 0 YS2-13n13.p1k chr12 548 566 464864 464863 F 19 0.00 566 accept 1 ALIGNMENT 481 YS2-13n13.p1k chr12 28 547 464345 464864 F 520 98.65 566 accept 1 ALIGNMENT 0 YS2-13n13.q1k vc_7 53 54 5172 6360 C 0 0.00 619 reject_vc 8 ALIGNMENT 51 YS2-13n13.q1k vc_7 54 3 6360 6411 C 52 100.00 619|1,0 reject_vc 8 ALIGNMENT 34 YS2-13n13.q1k vc_7 400 297 4585 4699 C 104 81.73 619 reject_vc 8 ALIGNMENT 181 YS2-13n13.q1k vc_7 270 53 4952 5172 C 218 94.95 619|0,1 reject_vc 8 ALIGNMENT 236 YS2-13n13.q1k vc_1 1 270 2689 2961 F 270 96.30 619 reject_vc 5 ALIGNMENT 267 YS2-13n13.q1k vc_7 400 1 2151 2569 C 400 90.50 619 reject_vc 3 ALIGNMENT 260 YS2-13n13.q1k vc_4 400 1 5234 5654 C 400 90.00 619 reject_vc 4 ALIGNMENT 28 YS2-13n13.q1k vc_4 270 236 77 112 C 35 94.29 619 reject_vc 9 ALIGNMENT 236 YS2-13n13.q1k vc_2 1 270 2322 2594 F 270 96.30 619 reject_vc 6 ALIGNMENT 236 YS2-13n13.q1k vc_3 1 270 2689 2961 F 270 96.30 619 reject_vc 7 ALIGNMENT 28 YS2-13n13.q1k vc_4 270 236 6304 6339 C 35 94.29 619 reject_vc 10 ALIGNMENT 0 YS2-13n13.q1k vc_7 296 271 4700 4951 C 26 0.00 619 reject_vc 8 ALIGNMENT 0 YS2-13n13.q1k vc_4 271 299 1584 1878 F 29 0.00 619 reject_vc 11 ALIGNMENT 0 YS2-13n13.p1k chr12 548 566 455727 455726 F 19 0.00 566 accept 0 ALIGNMENT 267 YS2-13n13.q1k vc_5 1 400 2556 2974 F 400 90.50 619 reject_vc 2 ALIGNMENT 481 YS2-13n13.p1k chr12 28 547 455208 455727 F 520 98.65 566 accept 0 ALIGNMENT 0 YS2-13n14.q1k vc_5 690 62 5064 5063 C 629 0.00 729 reject_low 6 ALIGNMENT 0 YS2-13n14.p1k chr12 696 679 676046 676045 C 18 0.00 696 accept_chi 0 ALIGNMENT 0 YS2-13n14.q1k vc_1 689 62 2512 2511 C 628 0.00 729 reject_low 2 ALIGNMENT 0 YS2-13n14.q1k vc_2 689 62 2145 2144 C 628 0.00 729 reject_low 3 ALIGNMENT 0 YS2-13n14.q1k vc_7 62 691 13525 13524 F 630 0.00 729 reject_low 7 ALIGNMENT 0 YS2-13n14.q1k vc_3 689 62 2512 2511 C 628 0.00 729 reject_low 4 ALIGNMENT 38 YS2-13n14.q1k vc_7 692 729 13525 13562 F 38 100.00 729 reject_low 7 ALIGNMENT 0 YS2-13n14.q1k vc_5 690 62 37 36 C 629 0.00 729 reject_low 8 ALIGNMENT 40 YS2-13n14.q1k vc_4 690 729 5832 5871 F 40 100.00 729 reject_low 5 ALIGNMENT 0 YS2-13n14.q1k chr12 690 729 676696 676695 F 40 0.00 729 accept_chi 1 ALIGNMENT 610 YS2-13n14.p1k chr12 678 27 676045 676696 C 652 99.23 696 accept_chi 0 ALIGNMENT 36 YS2-13n14.q1k vc_5 726 691 1 36 C 36 100.00 729 reject_low 8 ALIGNMENT 39 YS2-13n14.q1k vc_5 729 691 5025 5063 C 39 100.00 729 reject_low 6 ALIGNMENT 40 YS2-13n14.q1k vc_2 729 690 2105 2144 C 40 100.00 729 reject_low 3 ALIGNMENT 0 YS2-13n14.q1k vc_4 62 689 5832 5831 F 628 0.00 729 reject_low 5 ALIGNMENT 610 YS2-13n14.q1k chr12 38 689 676045 676696 F 652 99.23 729 accept_chi 1 ALIGNMENT 40 YS2-13n14.q1k vc_1 729 690 2472 2511 C 40 100.00 729 reject_low 2 ALIGNMENT 40 YS2-13n14.q1k vc_3 729 690 2472 2511 C 40 100.00 729 reject_low 4 ALIGNMENT 795 YS2-13n15.p1k chr15 72 1126 368588 369652 F 1055 92.42 1221 accept 0 ALIGNMENT 984 YS2-13n15.q1k chr15 1188 38 371701 372864 C 1151 96.26 1412 accept 0 ALIGNMENT 987 YS2-13n17.q1k chr13 37 1157 350750 351885 F 1121 96.43 1383 accept 0 ALIGNMENT 956 YS2-13n17.p1k chr13 1207 70 352644 353775 C 1138 95.17 1257 accept 0 ALIGNMENT 1004 YS2-13n18.p1k chr13 25 1175 155056 156221 F 1151 96.70 1210 accept 0 ALIGNMENT 966 YS2-13n18.q1k chr13 1151 41 156111 157236 C 1111 96.58 1355 accept 0 ALIGNMENT 157 YS2-13n22.q1k scplasm1 37 269 2574 2807 F 233 89.70 310 accept_chi 0 ALIGNMENT 0 YS2-13n22.q1k vc_5 271 62 5064 5063 C 210 0.00 310 reject_low 6 ALIGNMENT 39 YS2-13n22.q1k vc_5 310 272 5025 5063 C 39 100.00 310 reject_low 6 ALIGNMENT 41 YS2-13n22.q1k vc_3 310 270 2472 2512 C 41 100.00 310 reject_low 4 ALIGNMENT 0 YS2-13n22.q1k vc_5 271 62 37 36 C 210 0.00 310 reject_low 8 ALIGNMENT 0 YS2-13n22.p1k scplasm1 279 262 2575 2574 C 18 0.00 279 accept_chi 1 ALIGNMENT 41 YS2-13n22.q1k vc_4 270 310 5831 5871 F 41 100.00 310 reject_low 5 ALIGNMENT 36 YS2-13n22.q1k vc_5 307 272 1 36 C 36 100.00 310 reject_low 8 ALIGNMENT 151 YS2-13n22.p1k scplasm1 261 33 2574 2803 C 229 89.08 279 accept_chi 1 ALIGNMENT 0 YS2-13n22.q1k vc_3 269 62 2513 2512 C 208 0.00 310 reject_low 4 ALIGNMENT 38 YS2-13n22.q1k vc_7 273 310 13525 13562 F 38 100.00 310 reject_low 7 ALIGNMENT 0 YS2-13n22.q1k vc_7 62 272 13525 13524 F 211 0.00 310 reject_low 7 ALIGNMENT 0 YS2-13n22.q1k scplasm1 270 310 2807 2806 F 41 0.00 310 accept_chi 0 ALIGNMENT 0 YS2-13n22.q1k vc_1 269 62 2513 2512 C 208 0.00 310 reject_low 2 ALIGNMENT 41 YS2-13n22.q1k vc_2 310 270 2105 2145 C 41 100.00 310 reject_low 3 ALIGNMENT 41 YS2-13n22.q1k vc_1 310 270 2472 2512 C 41 100.00 310 reject_low 2 ALIGNMENT 0 YS2-13n22.q1k vc_2 269 62 2146 2145 C 208 0.00 310 reject_low 3 ALIGNMENT 0 YS2-13n22.q1k vc_4 62 269 5831 5830 F 208 0.00 310 reject_low 5 ALIGNMENT 1009 YS2-13n24.p1k chr02 1169 31 523446 524584 C 1139 97.28 1176 accept 0 ALIGNMENT 989 YS2-13n24.q1k chr02 32 1173 519368 520530 F 1142 96.94 1323 accept 0 ALIGNMENT 1028 YS2-13o01.q1k chr11 1292 40 217630 218880 C 1253 95.29 1312 accept 0 ALIGNMENT 962 YS2-13o01.p1k chr11 71 1139 213469 214536 F 1069 97.57 1146 accept 0 ALIGNMENT 968 YS2-13o02.q1k chr10 33 1276 300590 301849 F 1244 94.61 1335 accept 0 ALIGNMENT 922 YS2-13o02.p1k chr10 1094 29 305519 306604 C 1066 96.53 1121 accept 0 ALIGNMENT 1017 YS2-13o03.q1k chr12 1194 31 465585 466753 C 1164 96.05 1352 manual 0 ALIGNMENT 1015 YS2-13o03.q1k chr12 1192 31 456450 457616 C 1162 96.04 1352 manual 1 ALIGNMENT 875 YS2-13o04.q1k chr02 38 1081 583313 584388 F 1044 95.59 1319 accept 0 ALIGNMENT 1000 YS2-13o04.p1k chr02 1131 28 584478 585586 C 1104 97.37 1167 accept 0 ALIGNMENT 136 YS2-13o05.p1k chr12 210 31 459031 459211 C 180 95.00 228 reject_low 1 ALIGNMENT 0 YS2-13o05.p1k chr12 228 211 468169 468168 C 18 0.00 228 accept 0 ALIGNMENT 0 YS2-13o05.q1k vc_1 227 62 2512 2511 C 166 0.00 267 reject_low 3 ALIGNMENT 39 YS2-13o05.q1k vc_5 267 229 5025 5063 C 39 100.00 267 reject_low 7 ALIGNMENT 40 YS2-13o05.q1k vc_1 267 228 2472 2511 C 40 100.00 267 reject_low 3 ALIGNMENT 38 YS2-13o05.q1k vc_7 230 267 13525 13562 F 38 100.00 267 reject_low 8 ALIGNMENT 0 YS2-13o05.q1k vc_5 228 62 5064 5063 C 167 0.00 267 reject_low 7 ALIGNMENT 0 YS2-13o05.q1k vc_7 62 229 13525 13524 F 168 0.00 267 reject_low 8 ALIGNMENT 40 YS2-13o05.q1k vc_4 228 267 5832 5871 F 40 100.00 267 reject_low 6 ALIGNMENT 36 YS2-13o05.q1k vc_5 264 229 1 36 C 36 100.00 267 reject_low 9 ALIGNMENT 0 YS2-13o05.q1k chr12 228 267 459211 459210 F 40 0.00 267 accept 0 ALIGNMENT 0 YS2-13o05.q1k vc_3 227 62 2512 2511 C 166 0.00 267 reject_low 5 ALIGNMENT 0 YS2-13o05.p1k chr12 228 211 459032 459031 C 18 0.00 228 reject_low 1 ALIGNMENT 0 YS2-13o05.q1k vc_4 62 227 5832 5831 F 166 0.00 267 reject_low 6 ALIGNMENT 123 YS2-13o05.q1k chr12 39 227 468168 468348 F 189 93.65 267 reject_low 2 ALIGNMENT 0 YS2-13o05.q1k vc_2 227 62 2145 2144 C 166 0.00 267 reject_low 4 ALIGNMENT 40 YS2-13o05.q1k vc_3 267 228 2472 2511 C 40 100.00 267 reject_low 5 ALIGNMENT 123 YS2-13o05.q1k chr12 39 227 459031 459211 F 189 93.65 267 accept 0 ALIGNMENT 0 YS2-13o05.q1k vc_5 228 62 37 36 C 167 0.00 267 reject_low 9 ALIGNMENT 0 YS2-13o05.q1k chr12 228 267 468348 468347 F 40 0.00 267 reject_low 2 ALIGNMENT 136 YS2-13o05.p1k chr12 210 31 468168 468348 C 180 95.00 228 accept 0 ALIGNMENT 40 YS2-13o05.q1k vc_2 267 228 2105 2144 C 40 100.00 267 reject_low 4 ALIGNMENT 0 YS2-13o06.q1k chr15 170 209 1951 1950 F 40 0.00 209 ambiguous_tel 2 ALIGNMENT 83 YS2-13o06.q1k chr14 41 171 16324 16454 F 131 87.79 209 ambiguous_tel 4 ALIGNMENT 41 YS2-13o06.q1k vc_1 209 169 2472 2512 C 41 100.00 209 reject_low 5 ALIGNMENT 119 YS2-13o06.q1k chr04 41 166 17780 17905 F 126 98.41 209 ambiguous_tel 0 ALIGNMENT 0 YS2-13o06.q1k chr04 167 209 17905 17904 F 43 0.00 209 ambiguous_tel 0 ALIGNMENT 0 YS2-13o06.q1k vc_4 62 168 5831 5830 F 107 0.00 209 reject_low 7 ALIGNMENT 0 YS2-13o06.q1k vc_5 170 62 5064 5063 C 109 0.00 209 reject_low 8 ALIGNMENT 0 YS2-13o06.q1k chr14 172 209 16454 16453 F 38 0.00 209 ambiguous_tel 4 ALIGNMENT 96 YS2-13o06.q1k chr06 41 167 14508 14634 F 127 92.13 209 ambiguous_tel 1 ALIGNMENT 0 YS2-13o06.q1k vc_1 168 62 2513 2512 C 107 0.00 209 reject_low 5 ALIGNMENT 39 YS2-13o06.q1k vc_5 209 171 5025 5063 C 39 100.00 209 reject_low 8 ALIGNMENT 0 YS2-13o06.q1k chr03 209 170 314674 314673 C 40 0.00 209 ambiguous_tel 3 ALIGNMENT 0 YS2-13o06.q1k vc_7 62 171 13525 13524 F 110 0.00 209 reject_low 9 ALIGNMENT 93 YS2-13o06.q1k chr03 169 46 314673 314796 C 124 91.94 209 ambiguous_tel 3 ALIGNMENT 0 YS2-13o06.q1k chr06 168 209 14634 14633 F 42 0.00 209 ambiguous_tel 1 ALIGNMENT 38 YS2-13o06.q1k vc_7 172 209 13525 13562 F 38 100.00 209 reject_low 9 ALIGNMENT 41 YS2-13o06.q1k vc_3 209 169 2472 2512 C 41 100.00 209 reject_low 6 ALIGNMENT 0 YS2-13o06.q1k vc_5 170 62 37 36 C 109 0.00 209 reject_low 10 ALIGNMENT 41 YS2-13o06.q1k vc_4 169 209 5831 5871 F 41 100.00 209 reject_low 7 ALIGNMENT 36 YS2-13o06.q1k vc_5 206 171 1 36 C 36 100.00 209 reject_low 10 ALIGNMENT 96 YS2-13o06.q1k chr15 46 169 1828 1951 F 124 92.74 209 ambiguous_tel 2 ALIGNMENT 0 YS2-13o06.q1k vc_3 168 62 2513 2512 C 107 0.00 209 reject_low 6 ALIGNMENT 0 YS2-13o07.q1k chr16 741 702 698245 698244 C 40 0.00 741 accept_chi 0 ALIGNMENT 611 YS2-13o07.q1k chr16 701 28 698244 698917 C 674 98.81 741 accept_chi 0 ALIGNMENT 41 YS2-13o07.q1k vc_4 701 741 5831 5871 F 41 100.00 741 reject_low 4 ALIGNMENT 609 YS2-13o07.p1k chr16 54 724 698244 698916 F 671 98.96 724 accept_chi 1 ALIGNMENT 0 YS2-13o07.q1k vc_7 62 703 13525 13524 F 642 0.00 741 reject_low 5 ALIGNMENT 0 YS2-13o07.q1k vc_3 700 62 2513 2512 C 639 0.00 741 reject_low 3 ALIGNMENT 38 YS2-13o07.q1k vc_7 704 741 13525 13562 F 38 100.00 741 reject_low 5 ALIGNMENT 0 YS2-13o07.q1k vc_1 700 62 2513 2512 C 639 0.00 741 reject_low 2 ALIGNMENT 0 YS2-13o07.q1k vc_4 62 700 5831 5830 F 639 0.00 741 reject_low 4 ALIGNMENT 41 YS2-13o07.q1k vc_3 741 701 2472 2512 C 41 100.00 741 reject_low 3 ALIGNMENT 41 YS2-13o07.q1k vc_1 741 701 2472 2512 C 41 100.00 741 reject_low 2 ALIGNMENT 21 YS2-13o09.q1k vc_4 22 42 5812 5832 F 21 100.00 1309 reject_low 1 ALIGNMENT 965 YS2-13o09.q1k chr02 1159 41 668867 670004 C 1119 96.16 1309 accept 0 ALIGNMENT 0 YS2-13o09.q1k vc_4 43 877 5832 5831 F 835 0.00 1309 reject_low 1 ALIGNMENT 410 YS2-13o10.q1k vc_6 456 1 5555 6012 C 456 97.59 751 reject_low 1 ALIGNMENT 688 YS2-13o10.p1k scplasm1 1 971 4313 5284 F 971 90.83 972 accept 0 ALIGNMENT 409 YS2-13o10.q1k scplasm1 456 2 5862 6318 C 455 97.58 751 accept 0 ALIGNMENT 0 YS2-13o11.q1k chr04 887 811 390462 390461 C 77 0.00 1303 reject_low 2 ALIGNMENT 125 YS2-13o11.p1k chr03 37 288 131742 131984 F 252 86.11 1389 accept_chi 1 ALIGNMENT 0 YS2-13o11.q1k chr04 764 62 390507 390506 C 703 0.00 1303 reject_low 2 ALIGNMENT 892 YS2-13o11.q1k chr13 38 1153 408842 409979 F 1116 94.98 1303 accept_chi 0 ALIGNMENT 22 YS2-13o11.q1k chr04 810 765 390461 390506 C 46 95.65 1303 reject_low 2 ALIGNMENT 0 YS2-13o12.p1k chr15 849 868 105710 105709 F 20 0.00 1170 reject_low 1 ALIGNMENT 25 YS2-13o12.p1k chr15 807 848 105669 105710 F 42 85.71 1170 reject_low 1 ALIGNMENT 0 YS2-13o12.p1k chr15 62 806 105669 105668 F 745 0.00 1170 reject_low 1 ALIGNMENT 685 YS2-13o12.q1k chr08 29 1094 92463 93540 F 1066 89.21 1338 accept 0 ALIGNMENT 928 YS2-13o12.p1k chr08 1098 26 95560 96644 C 1073 95.81 1170 accept 0 ALIGNMENT 609 YS2-13o13.p1k chr12 35 1025 464564 465553 F 991 88.50 1143 accept 1 ALIGNMENT 436 YS2-13o13.q1k chr12 931 38 457526 458415 C 894 83.56 1255 reject_low 2 ALIGNMENT 609 YS2-13o13.p1k chr12 35 1025 455427 456416 F 991 88.50 1143 accept 0 ALIGNMENT 441 YS2-13o13.q1k chr12 995 38 466594 467552 C 958 82.78 1255 accept 0,1 ALIGNMENT 0 YS2-13o15.q1k vc_1 230 62 2514 2513 C 169 0.00 272 reject_low 2 ALIGNMENT 42 YS2-13o15.q1k vc_3 272 231 2472 2513 C 42 100.00 272 reject_low 3 ALIGNMENT 0 YS2-13o15.q1k chr13 272 233 708433 708432 C 40 0.00 272 accept_chi 1 ALIGNMENT 39 YS2-13o15.q1k vc_5 272 234 5025 5063 C 39 100.00 272 reject_low 5 ALIGNMENT 0 YS2-13o15.q1k vc_7 62 234 13525 13524 F 173 0.00 272 reject_low 6 ALIGNMENT 36 YS2-13o15.q1k vc_5 269 234 1 36 C 36 100.00 272 reject_low 7 ALIGNMENT 0 YS2-13o15.q1k vc_4 62 230 5830 5829 F 169 0.00 272 reject_low 4 ALIGNMENT 0 YS2-13o15.q1k vc_3 230 62 2514 2513 C 169 0.00 272 reject_low 3 ALIGNMENT 42 YS2-13o15.q1k vc_1 272 231 2472 2513 C 42 100.00 272 reject_low 2 ALIGNMENT 38 YS2-13o15.q1k vc_7 235 272 13525 13562 F 38 100.00 272 reject_low 6 ALIGNMENT 0 YS2-13o15.q1k vc_5 233 62 5064 5063 C 172 0.00 272 reject_low 5 ALIGNMENT 176 YS2-13o15.q1k chr13 232 29 708432 708638 C 204 98.04 272 accept_chi 1 ALIGNMENT 0 YS2-13o15.p1k chr13 234 252 708638 708637 F 19 0.00 252 accept_chi 0 ALIGNMENT 0 YS2-13o15.q1k vc_5 233 62 37 36 C 172 0.00 272 reject_low 7 ALIGNMENT 42 YS2-13o15.q1k vc_4 231 272 5830 5871 F 42 100.00 272 reject_low 4 ALIGNMENT 185 YS2-13o15.p1k chr13 29 233 708432 708638 F 205 99.02 252 accept_chi 0 ALIGNMENT 156 YS2-13o19.q1k chr14 902 1185 519164 519446 F 284 88.38 1328 reject_low 14 ALIGNMENT 0 YS2-13o19.q1k chr12 896 879 976258 976257 C 18 0.00 1328 reject_low 40 ALIGNMENT 931 YS2-13o19.p1k chr02 1139 34 33316 34420 C 1106 96.02 1147 reject_low 2 ALIGNMENT 294 YS2-13o19.q1k chr04 877 549 513689 514017 C 329 98.78 1328 reject_low 35 ALIGNMENT 0 YS2-13o19.q1k chr01 62 549 189420 189419 F 488 0.00 1328 reject_low 52 ALIGNMENT 0 YS2-13o19.q1k chr13 901 62 168682 168681 C 840 0.00 1328 reject_low 57 ALIGNMENT 286 YS2-13o19.q1k chr14 884 549 562031 562366 C 336 97.32 1328 reject_low 31 ALIGNMENT 0 YS2-13o19.q1k chr01 62 899 183134 183133 F 838 0.00 1328 reject_low 69 ALIGNMENT 922 YS2-13o19.p1k chr04 34 1139 514864 515968 F 1106 95.75 1147 reject_low 3 ALIGNMENT 27 YS2-13o19.q1k chr16 1127 1185 62266 62324 F 59 83.05 1328 reject_low 71 ALIGNMENT 0 YS2-13o19.q1k chr01 901 872 160576 165836 C 30 0.00 1328 reject_low 74 ALIGNMENT 59 YS2-13o19.q1k chr01 550 867 183136 183454 F 318 77.36 1328 reject_low 77 ALIGNMENT 106 YS2-13o19.q1k chr01 1185 901 165878 166164 C 285 82.81 1328 reject_low 62 ALIGNMENT 280 YS2-13o19.q1k chr12 871 550 731680 732002 C 322 98.14 1328 reject_low 41 ALIGNMENT 35 YS2-13o19.q1k chr03 1024 902 142953 143077 C 123 78.86 1328 reject_low 68 ALIGNMENT 888 YS2-13o19.p1k chr12 34 1139 976917 978021 F 1106 94.85 1147 reject_low 6 ALIGNMENT 0 YS2-13o19.q1k chr03 901 62 124463 124462 C 840 0.00 1328 reject_low 78 ALIGNMENT 105 YS2-13o19.q1k chr01 1185 902 160290 160575 C 284 82.75 1328 reject_low 74 ALIGNMENT 0 YS2-13o19.q1k chr10 582 62 537949 537948 C 521 0.00 1328 reject_low 67 ALIGNMENT 22 YS2-13o19.q1k chr16 952 975 62726 62749 F 24 100.00 1328 reject_low 76 ALIGNMENT 0 YS2-13o19.q1k chr12 549 62 732003 732002 C 488 0.00 1328 reject_low 41 ALIGNMENT 161 YS2-13o19.q1k chr07 902 1180 817079 817355 F 279 89.25 1328 reject_low 59 ALIGNMENT 78 YS2-13o19.q1k chr05 1230 1058 435946 436116 C 173 84.39 1328 reject_low 61 ALIGNMENT 0 YS2-13o19.q1k chr09 62 549 246217 246216 F 488 0.00 1328 reject_low 38 ALIGNMENT 0 YS2-13o19.q1k chr01 548 62 160577 160576 C 487 0.00 1328 reject_low 60 ALIGNMENT 890 YS2-13o19.p1k chr15 1139 34 973957 975061 C 1106 94.85 1147 reject_low 5 ALIGNMENT 0 YS2-13o19.q1k chr08 901 62 389513 389512 C 840 0.00 1328 reject_low 56 ALIGNMENT 156 YS2-13o19.q1k chr05 1180 902 431541 431818 C 279 89.25 1328 reject_low 75 ALIGNMENT 0 YS2-13o19.q1k chr07 896 874 817407 817406 C 23 0.00 1328 reject_low 65 ALIGNMENT 0 YS2-13o19.q1k chr12 548 62 976587 976586 C 487 0.00 1328 reject_low 40 ALIGNMENT 0 YS2-13o19.q1k chr12 901 62 732003 732002 C 840 0.00 1328 reject_low 54 ALIGNMENT 277 YS2-13o19.q1k chr13 871 550 168359 168681 C 322 97.83 1328 reject_low 44 ALIGNMENT 481 YS2-13o19.p1k chr16 34 1011 851810 852787 F 978 84.46 1147 reject_low 22 ALIGNMENT 0 YS2-13o19.q1k chr03 62 582 149513 149512 F 521 0.00 1328 reject_low 80 ALIGNMENT 0 YS2-13o19.q1k chr12 896 872 731681 731680 C 25 0.00 1328 reject_low 41 ALIGNMENT 85 YS2-13o19.q1k chr03 274 358 151273 151357 F 85 100.00 1328 reject_low 16 ALIGNMENT 0 YS2-13o19.q1k chr07 62 901 817079 817078 F 840 0.00 1328 reject_low 59 ALIGNMENT 291 YS2-13o19.q1k chr12 550 881 941189 941520 F 332 98.19 1328 reject_low 1 ALIGNMENT 0 YS2-13o19.q1k chr12 62 549 941189 941188 F 488 0.00 1328 reject_low 1 ALIGNMENT 0 YS2-13o19.q1k chr03 62 901 90437 90436 F 840 0.00 1328 reject_low 45 ALIGNMENT 0 YS2-13o19.q1k chr09 882 896 246549 246548 F 15 0.00 1328 reject_low 38 ALIGNMENT 24 YS2-13o19.q1k chr03 1185 1127 124182 124240 C 59 81.36 1328 reject_low 78 ALIGNMENT 0 YS2-13o19.q1k chr03 1026 1126 149605 151738 F 101 0.00 1328 reject_low 79 ALIGNMENT 0 YS2-13o19.q1k chr10 933 62 537949 537948 C 872 0.00 1328 reject_low 72 ALIGNMENT 29 YS2-13o19.q1k chr03 934 1025 149513 149604 F 92 80.43 1328 reject_low 79 ALIGNMENT 0 YS2-13o19.q1k chr12 882 896 941520 941519 F 15 0.00 1328 reject_low 1 ALIGNMENT 253 YS2-13o19.q1k chr14 546 871 519160 519487 F 326 95.09 1328 reject_low 73 ALIGNMENT 0 YS2-13o19.q1k chr16 62 548 62388 62387 F 487 0.00 1328 reject_low 76 ALIGNMENT 292 YS2-13o19.q1k chr03 549 881 90436 90768 F 333 98.20 1328 reject_low 33 ALIGNMENT 0 YS2-13o19.q1k chr05 901 879 431819 435944 C 23 0.00 1328 reject_low 75 ALIGNMENT 0 YS2-13o19.q1k chr01 896 872 160250 160249 C 25 0.00 1328 reject_low 60 ALIGNMENT 278 YS2-13o19.q1k chr05 881 550 431486 431818 C 332 96.99 1328 reject_low 39 ALIGNMENT 55 YS2-13o19.q1k chr07 873 749 817406 817532 C 125 84.00 1328 reject_low 65 ALIGNMENT 0 YS2-13o19.q1k chr06 62 901 143535 143534 F 840 0.00 1328 reject_low 48 ALIGNMENT 475 YS2-13o19.p1k chr13 34 1011 373881 374858 F 978 84.25 1147 reject_low 25 ALIGNMENT 0 YS2-13o19.q1k chr13 896 872 168360 168359 C 25 0.00 1328 reject_low 44 ALIGNMENT 0 YS2-13o19.q1k chr03 872 896 151838 151837 F 25 0.00 1328 reject_low 16 ALIGNMENT 0 YS2-13o19.q1k chr03 896 872 168606 168605 C 25 0.00 1328 reject_low 50 ALIGNMENT 488 YS2-13o19.p1k chr16 34 1025 805822 806813 F 992 84.38 1147 reject_low 21 ALIGNMENT 0 YS2-13o19.q1k chr10 879 896 538345 538344 F 18 0.00 1328 reject_low 36 ALIGNMENT 292 YS2-13o19.q1k chr12 549 881 946815 947147 F 333 98.20 1328 reject_low 34 ALIGNMENT 491 YS2-13o19.p1k chr04 1025 34 1099511 1100502 C 992 84.48 1147 reject_low 18 ALIGNMENT 0 YS2-13o19.q1k chr03 62 548 90436 90435 F 487 0.00 1328 reject_low 33 ALIGNMENT 42 YS2-13o19.q1k chr10 700 583 537832 537948 C 118 81.36 1328 reject_low 67 ALIGNMENT 0 YS2-13o19.q1k chr01 62 549 183136 183135 F 488 0.00 1328 reject_low 77 ALIGNMENT 163 YS2-13o19.q1k chr14 1229 902 562039 562365 C 328 87.20 1328 reject_low 49 ALIGNMENT 864 YS2-13o19.p1k chr15 34 1139 705244 706348 F 1106 94.12 1147 reject_low 13 ALIGNMENT 0 YS2-13o19.q1k chr03 1126 1025 124241 124337 C 102 0.00 1328 reject_low 78 ALIGNMENT 0 YS2-13o19.q1k chr16 62 600 62726 62725 F 539 0.00 1328 reject_low 66 ALIGNMENT 168 YS2-13o19.q1k chr12 902 1230 946816 947143 F 329 86.63 1328 reject_low 47 ALIGNMENT 93 YS2-13o19.q1k chr03 550 871 151518 151838 F 322 80.12 1328 reject_low 16 ALIGNMENT 166 YS2-13o19.q1k chr06 902 1230 143535 143862 F 329 87.54 1328 reject_low 48 ALIGNMENT 461 YS2-13o19.p1k chr13 1025 34 200080 201071 C 992 83.47 1147 reject_low 27 ALIGNMENT 0 YS2-13o19.q1k chr03 549 62 124463 124462 C 488 0.00 1328 reject_low 63 ALIGNMENT 376 YS2-13o19.p1k chr13 34 1011 358183 359160 F 978 80.98 1147 reject_low 28 ALIGNMENT 259 YS2-13o19.q1k chr03 871 549 168605 168929 C 323 95.98 1328 reject_low 50 ALIGNMENT 179 YS2-13o19.q1k chr12 902 1269 941189 941557 F 368 85.60 1328 reject_low 15 ALIGNMENT 0 YS2-13o19.q1k chr09 62 900 246216 246215 F 839 0.00 1328 reject_low 53 ALIGNMENT 61 YS2-13o19.q1k chr03 830 550 142798 143077 C 281 77.22 1328 reject_low 64 ALIGNMENT 0 YS2-13o19.q1k chr07 859 896 817387 817386 F 38 0.00 1328 reject_low 42 ALIGNMENT 873 YS2-13o19.p1k chr14 34 1139 563213 564317 F 1106 94.39 1147 reject_low 12 ALIGNMENT 0 YS2-13o19.q1k chr03 882 896 90768 90767 F 15 0.00 1328 reject_low 33 ALIGNMENT 86 YS2-13o19.q1k chr03 871 550 124141 124462 C 322 79.19 1328 reject_low 63 ALIGNMENT 162 YS2-13o19.q1k chr03 1185 902 168646 168928 C 284 89.44 1328 reject_low 55 ALIGNMENT 0 YS2-13o19.q1k chr14 872 901 519488 524729 F 30 0.00 1328 reject_low 73 ALIGNMENT 168 YS2-13o19.q1k chr03 902 1230 90437 90764 F 329 86.63 1328 reject_low 45 ALIGNMENT 461 YS2-13o19.p1k chr05 34 1025 444577 445568 F 992 83.47 1147 reject_low 26 ALIGNMENT 162 YS2-13o19.q1k chr08 1180 902 389235 389512 C 279 89.96 1328 reject_low 56 ALIGNMENT 0 YS2-13o19.q1k chr05 896 882 431487 431486 C 15 0.00 1328 reject_low 39 ALIGNMENT 0 YS2-13o19.q1k chr08 896 882 389181 389180 C 15 0.00 1328 reject_low 37 ALIGNMENT 0 YS2-13o19.q1k chr14 62 545 519160 519159 F 484 0.00 1328 reject_low 73 ALIGNMENT 0 YS2-13o19.q1k chr14 62 901 519164 519163 F 840 0.00 1328 reject_low 14 ALIGNMENT 38 YS2-13o19.q1k chr03 1024 902 124338 124462 C 123 79.67 1328 reject_low 78 ALIGNMENT 0 YS2-13o19.q1k chr10 62 549 538017 538016 F 488 0.00 1328 reject_low 36 ALIGNMENT 126 YS2-13o19.q1k chr01 901 1180 189419 189696 F 280 84.64 1328 reject_low 77 ALIGNMENT 0 YS2-13o19.q1k chr10 896 701 537833 537832 C 196 0.00 1328 reject_low 67 ALIGNMENT 194 YS2-13o19.q1k chr01 871 549 160249 160576 C 323 89.47 1328 reject_low 60 ALIGNMENT 0 YS2-13o19.q1k chr16 62 1126 62266 62265 F 1065 0.00 1328 reject_low 71 ALIGNMENT 27 YS2-13o19.q1k chr10 1025 934 537858 537948 C 92 79.35 1328 reject_low 72 ALIGNMENT 479 YS2-13o19.p1k chr10 1025 34 476126 477117 C 992 84.07 1147 reject_low 23 ALIGNMENT 39 YS2-13o19.q1k chr03 888 1024 151505 151641 F 137 79.56 1328 reject_low 80 ALIGNMENT 0 YS2-13o19.q1k chr07 1126 62 817508 817507 C 1065 0.00 1328 reject_low 70 ALIGNMENT 0 YS2-13o19.q1k chr12 882 896 947147 947146 F 15 0.00 1328 reject_low 34 ALIGNMENT 43 YS2-13o19.q1k chr16 601 700 62726 62826 F 100 84.00 1328 reject_low 66 ALIGNMENT 0 YS2-13o19.q1k chr04 548 62 514018 514017 C 487 0.00 1328 reject_low 35 ALIGNMENT 162 YS2-13o19.q1k chr13 1180 902 168404 168681 C 279 89.96 1328 reject_low 57 ALIGNMENT 253 YS2-13o19.q1k chr14 549 871 524729 525053 F 323 95.36 1328 reject_low 51 ALIGNMENT 401 YS2-13o19.q1k chr05 42 476 435508 435942 F 435 98.16 1328 accept 0 ALIGNMENT 0 YS2-13o19.q1k chr14 548 62 562367 562366 C 487 0.00 1328 reject_low 31 ALIGNMENT 876 YS2-13o19.p1k chr04 1139 34 875491 876595 C 1106 94.48 1147 reject_low 11 ALIGNMENT 0 YS2-13o19.q1k chr03 896 872 124142 124141 C 25 0.00 1328 reject_low 63 ALIGNMENT 156 YS2-13o19.q1k chr14 902 1185 524730 525012 F 284 88.38 1328 reject_low 73 ALIGNMENT 0 YS2-13o19.q1k chr03 62 933 149513 149512 F 872 0.00 1328 reject_low 79 ALIGNMENT 0 YS2-13o19.q1k chr03 901 62 168929 168928 C 840 0.00 1328 reject_low 55 ALIGNMENT 27 YS2-13o19.q1k chr07 1185 1127 817449 817507 C 59 83.05 1328 reject_low 70 ALIGNMENT 0 YS2-13o19.q1k chr01 900 62 166165 166164 C 839 0.00 1328 reject_low 62 ALIGNMENT 0 YS2-13o19.q1k chr04 901 62 514017 514016 C 840 0.00 1328 reject_low 58 ALIGNMENT 177 YS2-13o19.q1k chr12 1223 902 976266 976585 C 322 88.82 1328 reject_low 43 ALIGNMENT 885 YS2-13o19.p1k chr07 1139 34 815127 816231 C 1106 94.76 1147 reject_low 9 ALIGNMENT 0 YS2-13o19.q1k chr01 868 896 189737 189736 F 29 0.00 1328 reject_low 52 ALIGNMENT 0 YS2-13o19.q1k chr12 901 62 976586 976585 C 840 0.00 1328 reject_low 43 ALIGNMENT 281 YS2-13o19.q1k chr08 881 550 389180 389512 C 332 97.29 1328 reject_low 37 ALIGNMENT 288 YS2-13o19.q1k chr10 550 878 538017 538345 F 329 98.18 1328 reject_low 36 ALIGNMENT 491 YS2-13o19.p1k chr13 1025 34 187913 188904 C 992 84.48 1147 reject_low 19 ALIGNMENT 0 YS2-13o19.q1k chr14 901 62 562366 562365 C 840 0.00 1328 reject_low 49 ALIGNMENT 243 YS2-13o19.q1k chr01 550 867 189420 189737 F 318 94.65 1328 reject_low 52 ALIGNMENT 514 YS2-13o19.p1k chr14 1011 34 522905 523882 C 978 85.58 1147 reject_low 14 ALIGNMENT 0 YS2-13o19.q1k chr12 62 901 941189 941188 F 840 0.00 1328 reject_low 15 ALIGNMENT 0 YS2-13o19.q1k chr05 549 62 431819 431818 C 488 0.00 1328 reject_low 39 ALIGNMENT 165 YS2-13o19.q1k chr12 1180 902 731725 732002 C 279 90.32 1328 reject_low 54 ALIGNMENT 476 YS2-13o19.p1k chr05 34 1025 493676 494667 F 992 83.97 1147 reject_low 24 ALIGNMENT 0 YS2-13o19.q1k chr07 748 62 817533 817532 C 687 0.00 1328 reject_low 65 ALIGNMENT 0 YS2-13o19.q1k chr06 62 548 143534 143533 F 487 0.00 1328 reject_low 32 ALIGNMENT 0 YS2-13o19.q1k chr13 549 62 168682 168681 C 488 0.00 1328 reject_low 44 ALIGNMENT 0 YS2-13o19.q1k chr03 896 831 142799 142798 C 66 0.00 1328 reject_low 64 ALIGNMENT 0 YS2-13o19.q1k chr10 62 901 538017 538016 F 840 0.00 1328 reject_low 46 ALIGNMENT 0 YS2-13o19.q1k chr05 1057 62 436117 436116 C 996 0.00 1328 reject_low 61 ALIGNMENT 0 YS2-13o19.q1k chr03 548 62 168930 168929 C 487 0.00 1328 reject_low 50 ALIGNMENT 885 YS2-13o19.p1k chr07 34 1139 569924 571028 F 1106 94.76 1147 reject_low 8 ALIGNMENT 0 YS2-13o19.q1k chr12 62 901 946816 946815 F 840 0.00 1328 reject_low 47 ALIGNMENT 879 YS2-13o19.p1k chr03 1139 34 88485 89589 C 1106 94.58 1147 reject_low 10 ALIGNMENT 168 YS2-13o19.q1k chr10 902 1230 538017 538344 F 329 86.63 1328 reject_low 46 ALIGNMENT 885 YS2-13o19.p1k chr06 1139 34 141583 142687 C 1106 94.76 1147 reject_low 7 ALIGNMENT 0 YS2-13o19.q1k chr03 1025 1126 151642 151738 F 102 0.00 1328 reject_low 80 ALIGNMENT 0 YS2-13o19.q1k chr07 62 548 817078 817077 F 487 0.00 1328 reject_low 42 ALIGNMENT 491 YS2-13o19.p1k chr16 1025 34 848160 849151 C 992 84.48 1147 reject_low 20 ALIGNMENT 0 YS2-13o19.q1k chr03 359 549 151358 151517 F 191 0.00 1328 reject_low 16 ALIGNMENT 882 YS2-13o19.p1k chr12 1139 34 944864 945968 C 1106 94.67 1147 reject_low 1 ALIGNMENT 0 YS2-13o19.q1k chr01 544 62 166169 166168 C 483 0.00 1328 reject_low 74 ALIGNMENT 141 YS2-13o19.q1k chr05 878 687 435945 436136 C 192 93.75 1328 reject_low 75 ALIGNMENT 0 YS2-13o19.q1k chr03 62 273 151273 151272 F 212 0.00 1328 reject_low 16 ALIGNMENT 0 YS2-13o19.p1k chr10 182 62 482553 482552 C 121 0.00 1147 reject_low 29 ALIGNMENT 0 YS2-13o19.q1k chr14 872 896 525053 525052 F 25 0.00 1328 reject_low 51 ALIGNMENT 0 YS2-13o19.q1k chr12 62 548 946815 946814 F 487 0.00 1328 reject_low 34 ALIGNMENT 26 YS2-13o19.q1k chr03 1127 1165 151739 151777 F 39 89.74 1328 reject_low 79,80 ALIGNMENT 0 YS2-13o19.q1k chr03 861 887 149787 151504 F 27 0.00 1328 reject_low 80 ALIGNMENT 195 YS2-13o19.q1k chr01 871 545 165837 166168 C 327 89.30 1328 reject_low 74 ALIGNMENT 0 YS2-13o19.q1k chr05 477 896 435942 435941 F 420 0.00 1328 accept 0 ALIGNMENT 277 YS2-13o19.q1k chr12 878 549 976257 976586 C 330 96.97 1328 reject_low 40 ALIGNMENT 0 YS2-13o19.q1k chr01 868 900 183455 189418 F 33 0.00 1328 reject_low 77 ALIGNMENT 0 YS2-13o19.q1k chr03 901 62 143078 143077 C 840 0.00 1328 reject_low 68 ALIGNMENT 164 YS2-13o19.q1k chr09 901 1180 246216 246494 F 280 89.64 1328 reject_low 53 ALIGNMENT 0 YS2-13o19.q1k chr03 549 62 143078 143077 C 488 0.00 1328 reject_low 64 ALIGNMENT 66 YS2-13o19.q1k chr03 583 860 149513 149786 F 278 78.42 1328 reject_low 80 ALIGNMENT 0 YS2-13o19.q1k chr04 896 878 513690 513689 C 19 0.00 1328 reject_low 35 ALIGNMENT 32 YS2-13o19.q1k chr01 900 1024 183134 183260 F 125 78.40 1328 reject_low 69 ALIGNMENT 0 YS2-13o19.q1k chr16 701 896 62826 62825 F 196 0.00 1328 reject_low 66 ALIGNMENT 281 YS2-13o19.q1k chr09 550 881 246217 246549 F 332 97.29 1328 reject_low 38 ALIGNMENT 195 YS2-13o19.q1k chr16 701 1223 62190 62708 F 523 83.37 1328 reject_low 30 ALIGNMENT 277 YS2-13o19.q1k chr16 549 878 62388 62717 F 330 96.97 1328 reject_low 76 ALIGNMENT 0 YS2-13o19.q1k chr05 686 62 436137 436136 C 625 0.00 1328 reject_low 75 ALIGNMENT 895 YS2-13o19.p1k chr04 1139 34 984840 985944 C 1106 94.94 1147 reject_low 4 ALIGNMENT 278 YS2-13o19.q1k chr07 549 858 817078 817387 F 310 99.35 1328 reject_low 42 ALIGNMENT 287 YS2-13o19.q1k chr06 549 882 143534 143867 F 334 97.60 1328 reject_low 32 ALIGNMENT 0 YS2-13o19.q1k chr16 879 951 62718 62725 F 73 0.00 1328 reject_low 76 ALIGNMENT 503 YS2-13o19.p1k chr04 34 1025 646678 647669 F 992 84.88 1147 reject_low 17 ALIGNMENT 0 YS2-13o19.q1k chr14 62 548 524729 524728 F 487 0.00 1328 reject_low 51 ALIGNMENT 161 YS2-13o19.q1k chr04 1180 902 513740 514016 C 279 89.96 1328 reject_low 58 ALIGNMENT 0 YS2-13o19.q1k chr08 549 62 389513 389512 C 488 0.00 1328 reject_low 37 ALIGNMENT 345 YS2-13o19.p1k chr10 1011 183 481724 482552 C 829 81.66 1147 reject_low 29 ALIGNMENT 0 YS2-13o19.q1k chr16 62 700 62190 62189 F 639 0.00 1328 reject_low 30 ALIGNMENT 0 YS2-13o20.q1k vc_7 62 277 13525 13524 F 216 0.00 315 reject_low 7 ALIGNMENT 233 YS2-13o20.q1k chr03 274 37 252627 252864 C 238 100.00 315 accept_chi 1 ALIGNMENT 0 YS2-13o20.q1k vc_3 274 62 2513 2512 C 213 0.00 315 reject_low 4 ALIGNMENT 41 YS2-13o20.q1k vc_4 275 315 5831 5871 F 41 100.00 315 reject_low 5 ALIGNMENT 0 YS2-13o20.q1k vc_5 276 62 5064 5063 C 215 0.00 315 reject_low 6 ALIGNMENT 39 YS2-13o20.q1k vc_5 315 277 5025 5063 C 39 100.00 315 reject_low 6 ALIGNMENT 41 YS2-13o20.q1k vc_3 315 275 2472 2512 C 41 100.00 315 reject_low 4 ALIGNMENT 41 YS2-13o20.q1k vc_1 315 275 2472 2512 C 41 100.00 315 reject_low 2 ALIGNMENT 41 YS2-13o20.q1k vc_2 315 275 2105 2145 C 41 100.00 315 reject_low 3 ALIGNMENT 0 YS2-13o20.p1k chr03 266 284 252864 252863 F 19 0.00 284 accept_chi 0 ALIGNMENT 38 YS2-13o20.q1k vc_7 278 315 13525 13562 F 38 100.00 315 reject_low 7 ALIGNMENT 0 YS2-13o20.q1k vc_1 274 62 2513 2512 C 213 0.00 315 reject_low 2 ALIGNMENT 0 YS2-13o20.q1k vc_4 62 274 5831 5830 F 213 0.00 315 reject_low 5 ALIGNMENT 36 YS2-13o20.q1k vc_5 312 277 1 36 C 36 100.00 315 reject_low 8 ALIGNMENT 0 YS2-13o20.q1k vc_2 274 62 2146 2145 C 213 0.00 315 reject_low 3 ALIGNMENT 0 YS2-13o20.q1k vc_5 276 62 37 36 C 215 0.00 315 reject_low 8 ALIGNMENT 233 YS2-13o20.p1k chr03 28 265 252627 252864 F 238 100.00 284 accept_chi 0 ALIGNMENT 0 YS2-13o20.q1k chr03 315 275 252628 252627 C 41 0.00 315 accept_chi 1 ALIGNMENT 0 YS2-13o22.q1k chr12 504 868 490543 490542 F 365 0.00 1338 reject_low 2 ALIGNMENT 459 YS2-13o22.q1k chr12 36 503 490076 490543 F 468 99.57 1338 reject_low 2 ALIGNMENT 530 YS2-13o22.p1k chr12 924 117 455003 455798 C 808 89.73 1247 accept 0 ALIGNMENT 1069 YS2-13o22.q1k chr12 36 1261 452108 453344 F 1226 95.92 1338 accept 0 ALIGNMENT 1069 YS2-13o22.q1k chr12 36 1261 461245 462481 F 1226 95.92 1338 accept 1 ALIGNMENT 530 YS2-13o22.p1k chr12 924 117 464140 464935 C 808 89.73 1247 accept 1 ALIGNMENT 939 YS2-13o23.q1k chr02 38 1173 683842 684987 F 1136 95.60 1266 accept 0 ALIGNMENT 961 YS2-13o23.p1k chr02 1120 39 688194 689275 C 1082 96.95 1124 accept 0 ALIGNMENT 442 YS2-13o24.q1k chr05 30 495 290429 290896 F 466 99.36 536 accept 0 ALIGNMENT 0 YS2-13o24.q1k vc_7 62 498 13525 13524 F 437 0.00 536 reject_low 5 ALIGNMENT 452 YS2-13o24.p1k chr05 501 35 290430 290896 C 467 99.79 501 accept 0 ALIGNMENT 39 YS2-13o24.q1k vc_5 536 498 5025 5063 C 39 100.00 536 reject_low 4 ALIGNMENT 41 YS2-13o24.q1k vc_4 496 536 5831 5871 F 41 100.00 536 reject_low 3 ALIGNMENT 0 YS2-13o24.q1k vc_1 495 62 2513 2512 C 434 0.00 536 reject_low 1 ALIGNMENT 38 YS2-13o24.q1k vc_7 499 536 13525 13562 F 38 100.00 536 reject_low 5 ALIGNMENT 0 YS2-13o24.q1k vc_5 497 62 37 36 C 436 0.00 536 reject_low 6 ALIGNMENT 0 YS2-13o24.q1k vc_5 497 62 5064 5063 C 436 0.00 536 reject_low 4 ALIGNMENT 0 YS2-13o24.q1k vc_4 62 495 5831 5830 F 434 0.00 536 reject_low 3 ALIGNMENT 41 YS2-13o24.q1k vc_1 536 496 2472 2512 C 41 100.00 536 reject_low 1 ALIGNMENT 0 YS2-13o24.q1k chr05 496 536 290896 290895 F 41 0.00 536 accept 0 ALIGNMENT 41 YS2-13o24.q1k vc_3 536 496 2472 2512 C 41 100.00 536 reject_low 2 ALIGNMENT 36 YS2-13o24.q1k vc_5 533 498 1 36 C 36 100.00 536 reject_low 6 ALIGNMENT 0 YS2-13o24.q1k vc_3 495 62 2513 2512 C 434 0.00 536 reject_low 2 ALIGNMENT 0 YS2-13p01.q1k vc_4 62 580 5829 5828 F 519 0.00 623 reject_low 4 ALIGNMENT 42 YS2-13p01.q1k vc_3 623 581 2472 2514 C 43 100.00 623 reject_low 3 ALIGNMENT 0 YS2-13p01.q1k vc_5 584 62 5064 5063 C 523 0.00 623 reject_low 5 ALIGNMENT 42 YS2-13p01.q1k vc_4 581 623 5829 5871 F 43 100.00 623 reject_low 4 ALIGNMENT 0 YS2-13p01.q1k chr02 583 623 585641 585640 F 41 0.00 623 accept_chi 0 ALIGNMENT 0 YS2-13p01.q1k vc_7 62 585 13525 13524 F 524 0.00 623 reject_low 6 ALIGNMENT 0 YS2-13p01.q1k vc_1 580 62 2515 2514 C 519 0.00 623 reject_low 2 ALIGNMENT 39 YS2-13p01.q1k vc_5 623 585 5025 5063 C 39 100.00 623 reject_low 5 ALIGNMENT 0 YS2-13p01.q1k vc_5 584 62 37 36 C 523 0.00 623 reject_low 7 ALIGNMENT 537 YS2-13p01.p1k chr02 572 29 585098 585641 C 544 99.82 591 accept_chi 1 ALIGNMENT 0 YS2-13p01.p1k chr02 591 573 585099 585098 C 19 0.00 591 accept_chi 1 ALIGNMENT 36 YS2-13p01.q1k vc_5 620 585 1 36 C 36 100.00 623 reject_low 7 ALIGNMENT 42 YS2-13p01.q1k vc_1 623 581 2472 2514 C 43 100.00 623 reject_low 2 ALIGNMENT 0 YS2-13p01.q1k vc_3 580 62 2515 2514 C 519 0.00 623 reject_low 3 ALIGNMENT 38 YS2-13p01.q1k vc_7 586 623 13525 13562 F 38 100.00 623 reject_low 6 ALIGNMENT 540 YS2-13p01.q1k chr02 39 582 585098 585641 F 544 100.00 623 accept_chi 0 ALIGNMENT 974 YS2-13p02.q1k chr04 47 1190 776216 777374 F 1144 95.80 1324 accept 0 ALIGNMENT 1006 YS2-13p03.q1k chr12 1215 31 320469 321675 C 1185 95.95 1386 accept 0 ALIGNMENT 959 YS2-13p03.p1k chr12 26 1154 315386 316526 F 1129 96.28 1157 accept 0 ALIGNMENT 0 YS2-13p04.p1k chr12 599 581 582264 582263 C 19 0.00 599 accept_chi 0 ALIGNMENT 0 YS2-13p04.q1k vc_1 586 62 2513 2512 C 525 0.00 627 reject_low 2 ALIGNMENT 41 YS2-13p04.q1k vc_3 627 587 2472 2512 C 41 100.00 627 reject_low 4 ALIGNMENT 0 YS2-13p04.q1k vc_3 586 62 2513 2512 C 525 0.00 627 reject_low 4 ALIGNMENT 0 YS2-13p04.q1k vc_5 588 42 37 2376 C 547 0.00 627 reject_low 8 ALIGNMENT 530 YS2-13p04.q1k chr12 39 586 582263 582811 F 548 99.82 627 accept_chi 1 ALIGNMENT 41 YS2-13p04.q1k vc_4 587 627 5831 5871 F 41 100.00 627 reject_low 5 ALIGNMENT 0 YS2-13p04.q1k chr12 587 627 582811 582810 F 41 0.00 627 accept_chi 1 ALIGNMENT 0 YS2-13p04.q1k vc_2 586 62 2146 2145 C 525 0.00 627 reject_low 3 ALIGNMENT 535 YS2-13p04.p1k chr12 580 32 582263 582811 C 549 100.00 599 accept_chi 0 ALIGNMENT 41 YS2-13p04.q1k vc_2 627 587 2105 2145 C 41 100.00 627 reject_low 3 ALIGNMENT 38 YS2-13p04.q1k vc_7 590 627 13525 13562 F 38 100.00 627 reject_low 7 ALIGNMENT 20 YS2-13p04.q1k vc_5 41 22 2377 2396 C 20 100.00 627 reject_low 8 ALIGNMENT 0 YS2-13p04.q1k vc_7 62 589 13525 13524 F 528 0.00 627 reject_low 7 ALIGNMENT 0 YS2-13p04.q1k vc_4 62 586 5831 5830 F 525 0.00 627 reject_low 5 ALIGNMENT 0 YS2-13p04.q1k vc_5 588 62 5064 5063 C 527 0.00 627 reject_low 6 ALIGNMENT 41 YS2-13p04.q1k vc_1 627 587 2472 2512 C 41 100.00 627 reject_low 2 ALIGNMENT 36 YS2-13p04.q1k vc_5 624 589 1 36 C 36 100.00 627 reject_low 8 ALIGNMENT 39 YS2-13p04.q1k vc_5 627 589 5025 5063 C 39 100.00 627 reject_low 6 ALIGNMENT 1027 YS2-13p05.q1k chr12 1231 40 455685 456872 C 1192 95.22 1383 accept 0 ALIGNMENT 1027 YS2-13p05.q1k chr12 1231 40 464822 466009 C 1192 95.22 1383 accept 1 ALIGNMENT 129 YS2-13p06.q1k chr04 40 179 17766 17905 F 140 97.86 222 ambiguous_tel 7 ALIGNMENT 417 YS2-13p06.p1k vc_5 600 1 4062 4669 C 600 90.67 663 reject_vc 0 ALIGNMENT 0 YS2-13p06.q1k vc_1 181 62 2513 2512 C 120 0.00 222 reject_vc 12 ALIGNMENT 414 YS2-13p06.p1k vc_2 600 1 1142 1749 C 600 90.50 663 reject_vc 3 ALIGNMENT 417 YS2-13p06.p1k vc_6 1 600 3712 4319 F 600 90.67 663 reject_vc 1 ALIGNMENT 0 YS2-13p06.q1k vc_2 181 62 2146 2145 C 120 0.00 222 reject_vc 13 ALIGNMENT 41 YS2-13p06.q1k vc_1 222 182 2472 2512 C 41 100.00 222 reject_vc 12 ALIGNMENT 87 YS2-13p06.q1k chr14 40 184 16310 16454 F 145 86.90 222 ambiguous_tel 11 ALIGNMENT 0 YS2-13p06.q1k vc_3 181 62 2513 2512 C 120 0.00 222 reject_vc 14 ALIGNMENT 0 YS2-13p06.q1k chr14 185 222 16454 16453 F 38 0.00 222 ambiguous_tel 11 ALIGNMENT 103 YS2-13p06.q1k chr06 40 180 14494 14634 F 141 91.49 222 ambiguous_tel 8 ALIGNMENT 41 YS2-13p06.q1k vc_4 182 222 5831 5871 F 41 100.00 222 reject_vc 15 ALIGNMENT 0 YS2-13p06.q1k vc_4 62 181 5831 5830 F 120 0.00 222 reject_vc 15 ALIGNMENT 0 YS2-13p06.q1k chr15 183 222 1951 1950 F 40 0.00 222 ambiguous_tel 9 ALIGNMENT 0 YS2-13p06.q1k chr06 181 222 14634 14633 F 42 0.00 222 ambiguous_tel 8 ALIGNMENT 0 YS2-13p06.q1k vc_5 183 62 37 36 C 122 0.00 222 reject_vc 18 ALIGNMENT 95 YS2-13p06.q1k chr03 182 48 314673 314807 C 135 90.37 222 ambiguous_tel 10 ALIGNMENT 0 YS2-13p06.q1k chr03 222 183 314674 314673 C 40 0.00 222 ambiguous_tel 10 ALIGNMENT 41 YS2-13p06.q1k vc_3 222 182 2472 2512 C 41 100.00 222 reject_vc 14 ALIGNMENT 0 YS2-13p06.q1k vc_5 183 62 5064 5063 C 122 0.00 222 reject_vc 16 ALIGNMENT 41 YS2-13p06.q1k vc_2 222 182 2105 2145 C 41 100.00 222 reject_vc 13 ALIGNMENT 36 YS2-13p06.q1k vc_5 219 184 1 36 C 36 100.00 222 reject_vc 18 ALIGNMENT 0 YS2-13p06.q1k vc_7 62 184 13525 13524 F 123 0.00 222 reject_vc 17 ALIGNMENT 98 YS2-13p06.q1k chr15 48 182 1817 1951 F 135 91.11 222 ambiguous_tel 9 ALIGNMENT 0 YS2-13p06.q1k chr04 180 222 17905 17904 F 43 0.00 222 ambiguous_tel 7 ALIGNMENT 38 YS2-13p06.q1k vc_7 185 222 13525 13562 F 38 100.00 222 reject_vc 17 ALIGNMENT 408 YS2-13p06.p1k vc_7 1 600 456 1063 F 600 90.17 663 reject_vc 5 ALIGNMENT 408 YS2-13p06.p1k vc_7 1 600 13918 14525 F 600 90.17 663 reject_vc 6 ALIGNMENT 39 YS2-13p06.q1k vc_5 222 184 5025 5063 C 39 100.00 222 reject_vc 16 ALIGNMENT 414 YS2-13p06.p1k vc_3 600 1 1142 1749 C 600 90.50 663 reject_vc 4 ALIGNMENT 414 YS2-13p06.p1k vc_1 600 1 1142 1749 C 600 90.50 663 reject_vc 2 ALIGNMENT 991 YS2-13p07.p1k chr13 29 1217 246853 248039 F 1189 95.46 1224 accept 0 ALIGNMENT 1015 YS2-13p07.q1k chr13 1169 40 250417 251557 C 1130 96.64 1359 accept 0 ALIGNMENT 944 YS2-13p08.p1k chr13 30 1140 387314 388443 F 1111 95.59 1202 accept 0 ALIGNMENT 995 YS2-13p08.q1k chr13 1259 40 391784 393017 C 1220 95.25 1387 accept 0 ALIGNMENT 158 YS2-13p10.p1k vc_6 950 767 6352 6535 C 184 95.65 1239 reject_low 2 ALIGNMENT 658 YS2-13p10.p1k scplasm1 52 1165 3407 4533 F 1114 87.70 1239 accept 0 ALIGNMENT 0 YS2-13p10.p1k scplasm1 572 884 756 755 F 313 0.00 1239 reject_low 4 ALIGNMENT 0 YS2-13p10.p1k scplasm1 534 62 3934 3933 C 473 0.00 1239 reject_low 3 ALIGNMENT 525 YS2-13p10.p1k scplasm1 950 354 341 936 C 597 96.31 1239 reject_low 1 ALIGNMENT 22 YS2-13p10.p1k scplasm1 535 571 720 756 F 37 86.49 1239 reject_low 4 ALIGNMENT 22 YS2-13p10.p1k scplasm1 571 535 3897 3933 C 37 86.49 1239 reject_low 3 ALIGNMENT 0 YS2-13p10.q1k scplasm1 62 1029 342 341 F 968 0.00 1327 reject_low 3 ALIGNMENT 0 YS2-13p10.p1k vc_6 766 62 6536 6535 C 705 0.00 1239 reject_low 2 ALIGNMENT 0 YS2-13p10.p1k scplasm1 884 572 3898 3897 C 313 0.00 1239 reject_low 3 ALIGNMENT 42 YS2-13p10.q1k scplasm1 1030 1116 342 437 F 87 87.36 1327 reject_low 3 ALIGNMENT 942 YS2-13p10.q1k scplasm1 1116 33 4216 5312 C 1084 96.59 1327 accept 0 ALIGNMENT 0 YS2-13p10.p1k scplasm1 353 62 937 936 C 292 0.00 1239 reject_low 1 ALIGNMENT 0 YS2-13p10.p1k scplasm1 62 534 720 719 F 473 0.00 1239 reject_low 4 ALIGNMENT 932 YS2-13p11.q1k chr04 35 1178 536033 537191 F 1144 94.32 1374 reject_low 2 ALIGNMENT 938 YS2-13p11.q1k chr04 35 1206 528263 529453 F 1172 94.11 1374 accept 0 ALIGNMENT 938 YS2-13p11.q1k chr04 35 1206 532148 533338 F 1172 94.11 1374 accept 1 ALIGNMENT 918 YS2-13p12.p1k chr05 1160 29 212265 213385 C 1132 95.49 1226 accept 0 ALIGNMENT 928 YS2-13p12.q1k chr05 39 1046 209630 210643 F 1008 97.82 1304 accept 0 ALIGNMENT 945 YS2-13p14.q1k chr11 38 1099 164543 165630 F 1062 96.99 1331 accept 0 ALIGNMENT 978 YS2-13p15.q1k chr13 38 1147 684470 685591 F 1110 97.03 1360 accept 0 ALIGNMENT 1017 YS2-13p16.q1k chr06 40 1177 66827 67980 F 1138 97.45 1361 accept 0 ALIGNMENT 1034 YS2-13p16.p1k chr06 1203 26 68513 69685 C 1178 97.11 1206 accept 0 ALIGNMENT 376 YS2-13p17.p1k chr16 707 129 326360 326956 C 579 90.33 1073 accept 0 ALIGNMENT 906 YS2-13p17.q1k chr16 40 1088 323592 324656 F 1049 96.76 1308 accept 0 ALIGNMENT 0 YS2-13p18.q1k chr11 212 252 210714 210713 F 41 0.00 252 accept_chi 0 ALIGNMENT 41 YS2-13p18.q1k vc_4 212 252 5831 5871 F 41 100.00 252 reject_low 4 ALIGNMENT 38 YS2-13p18.q1k vc_7 215 252 13525 13562 F 38 100.00 252 reject_low 6 ALIGNMENT 39 YS2-13p18.q1k vc_5 252 214 5025 5063 C 39 100.00 252 reject_low 5 ALIGNMENT 175 YS2-13p18.p1k chr11 208 30 210533 210711 C 179 100.00 215 accept_chi 1 ALIGNMENT 36 YS2-13p18.q1k vc_5 249 214 1 36 C 36 100.00 252 reject_low 7 ALIGNMENT 0 YS2-13p18.q1k vc_7 62 214 13525 13524 F 153 0.00 252 reject_low 6 ALIGNMENT 0 YS2-13p18.q1k vc_1 211 62 2513 2512 C 150 0.00 252 reject_low 2 ALIGNMENT 0 YS2-13p18.q1k vc_3 211 62 2513 2512 C 150 0.00 252 reject_low 3 ALIGNMENT 0 YS2-13p18.q1k vc_5 213 62 37 36 C 152 0.00 252 reject_low 7 ALIGNMENT 41 YS2-13p18.q1k vc_1 252 212 2472 2512 C 41 100.00 252 reject_low 2 ALIGNMENT 178 YS2-13p18.q1k chr11 30 211 210533 210714 F 182 100.00 252 accept_chi 0 ALIGNMENT 0 YS2-13p18.q1k vc_5 213 62 5064 5063 C 152 0.00 252 reject_low 5 ALIGNMENT 0 YS2-13p18.q1k vc_4 62 211 5831 5830 F 150 0.00 252 reject_low 4 ALIGNMENT 41 YS2-13p18.q1k vc_3 252 212 2472 2512 C 41 100.00 252 reject_low 3 ALIGNMENT 449 YS2-13p20.p1k chr13 52 994 162330 163272 F 943 82.71 1212 reject_low 3 ALIGNMENT 1043 YS2-13p20.p1k chr08 1199 29 554681 555854 C 1171 96.50 1212 accept_tel 0 ALIGNMENT 935 YS2-13p20.p1k chr01 1199 30 228018 229194 C 1170 93.50 1212 reject_low 1 ALIGNMENT 959 YS2-13p20.q1k chr01 39 1118 224175 225266 F 1080 97.22 1353 reject_low 1 ALIGNMENT 707 YS2-13p20.p1k chr12 1177 29 1002860 1004011 C 1149 87.12 1212 reject_low 2 ALIGNMENT 980 YS2-13p20.q1k chr08 39 1118 550821 551914 F 1080 97.69 1353 accept_tel 0 ALIGNMENT 0 YS2-13p22.p1k chr14 407 390 545790 545789 C 18 0.00 407 accept_chi 1 ALIGNMENT 36 YS2-13p22.q1k vc_5 432 397 1 36 C 36 100.00 435 reject_low 7 ALIGNMENT 0 YS2-13p22.q1k vc_7 62 397 13525 13524 F 336 0.00 435 reject_low 6 ALIGNMENT 0 YS2-13p22.q1k vc_5 396 62 5064 5063 C 335 0.00 435 reject_low 5 ALIGNMENT 41 YS2-13p22.q1k vc_3 435 395 2472 2512 C 41 100.00 435 reject_low 3 ALIGNMENT 0 YS2-13p22.q1k vc_3 394 62 2513 2512 C 333 0.00 435 reject_low 3 ALIGNMENT 344 YS2-13p22.p1k chr14 389 25 545789 546153 C 365 99.73 407 accept_chi 1 ALIGNMENT 41 YS2-13p22.q1k vc_4 395 435 5831 5871 F 41 100.00 435 reject_low 4 ALIGNMENT 38 YS2-13p22.q1k vc_7 398 435 13525 13562 F 38 100.00 435 reject_low 6 ALIGNMENT 39 YS2-13p22.q1k vc_5 435 397 5025 5063 C 39 100.00 435 reject_low 5 ALIGNMENT 0 YS2-13p22.q1k chr14 395 435 546153 546152 F 41 0.00 435 accept_chi 0 ALIGNMENT 41 YS2-13p22.q1k vc_1 435 395 2472 2512 C 41 100.00 435 reject_low 2 ALIGNMENT 347 YS2-13p22.q1k chr14 30 394 545789 546153 F 365 100.00 435 accept_chi 0 ALIGNMENT 0 YS2-13p22.q1k vc_1 394 62 2513 2512 C 333 0.00 435 reject_low 2 ALIGNMENT 0 YS2-13p22.q1k vc_5 396 62 37 36 C 335 0.00 435 reject_low 7 ALIGNMENT 0 YS2-13p22.q1k vc_4 62 394 5831 5830 F 333 0.00 435 reject_low 4 ALIGNMENT 1029 YS2-13p24.p1k chr14 33 1165 368631 369764 F 1133 97.44 1165 accept 0 ALIGNMENT 1054 YS2-13p24.q1k chr14 1202 31 372085 373272 C 1172 97.35 1295 accept 0 ALIGNMENT 41 YS2-14a01.q1k vc_1 238 198 2472 2512 C 41 100.00 238 reject_low 3 ALIGNMENT 133 YS2-14a01.q1k chr12 197 36 782075 782236 C 162 95.68 238 accept_chi 1 ALIGNMENT 0 YS2-14a01.q1k vc_1 197 62 2513 2512 C 136 0.00 238 reject_low 3 ALIGNMENT 0 YS2-14a01.q1k vc_4 62 197 5831 5830 F 136 0.00 238 reject_low 5 ALIGNMENT 0 YS2-14a01.q1k vc_3 197 62 2513 2512 C 136 0.00 238 reject_low 4 ALIGNMENT 138 YS2-14a01.p1k chr12 32 192 782075 782236 F 161 96.27 210 accept_chi 0 ALIGNMENT 37 YS2-14a01.q1k vc_5 235 193 1 43 C 43 95.35 238 reject_low 6 ALIGNMENT 0 YS2-14a01.q1k vc_5 192 62 44 43 C 131 0.00 238 reject_low 6 ALIGNMENT 40 YS2-14a01.q1k vc_5 238 193 5025 5070 C 46 95.65 238 reject_low 2 ALIGNMENT 0 YS2-14a01.p1k chr12 193 210 782236 782235 F 18 0.00 210 accept_chi 0 ALIGNMENT 41 YS2-14a01.q1k vc_3 238 198 2472 2512 C 41 100.00 238 reject_low 4 ALIGNMENT 38 YS2-14a01.q1k vc_7 201 238 13525 13562 F 38 100.00 238 reject_low 7 ALIGNMENT 41 YS2-14a01.q1k vc_4 198 238 5831 5871 F 41 100.00 238 reject_low 5 ALIGNMENT 0 YS2-14a01.q1k vc_5 192 62 5071 5070 C 131 0.00 238 reject_low 2 ALIGNMENT 0 YS2-14a01.q1k chr12 238 198 782076 782075 C 41 0.00 238 accept_chi 1 ALIGNMENT 0 YS2-14a01.q1k vc_7 62 200 13525 13524 F 139 0.00 238 reject_low 7 ALIGNMENT 895 YS2-14a04.p1k chr07 1190 30 12341 13508 C 1161 93.71 1425 accept 0 ALIGNMENT 788 YS2-14a04.q1k chr07 41 1248 10464 11679 F 1208 89.65 1377 accept 0 ALIGNMENT 734 YS2-14a04.q1k chr15 1209 41 1069713 1070883 C 1169 88.71 1377 reject_low 1 ALIGNMENT 0 YS2-14a06.p1k chr14 494 62 519488 519487 C 433 0.00 1330 reject_low 38 ALIGNMENT 0 YS2-14a06.p1k chr03 62 494 124141 124140 F 433 0.00 1330 reject_low 52 ALIGNMENT 0 YS2-14a06.q1k chr05 531 885 488162 488161 F 355 0.00 1349 reject_low 13 ALIGNMENT 27 YS2-14a06.q1k chr04 237 355 1352962 1353079 F 119 78.15 1349 reject_low 60 ALIGNMENT 0 YS2-14a06.q1k chr12 885 529 981366 981365 C 357 0.00 1349 reject_low 4 ALIGNMENT 0 YS2-14a06.q1k chr01 196 62 160576 160575 C 135 0.00 1349 reject_low 40 ALIGNMENT 289 YS2-14a06.q1k chr05 219 530 449317 449628 F 312 99.68 1349 reject_low 34 ALIGNMENT 306 YS2-14a06.q1k chr12 530 197 976252 976585 C 334 99.40 1349 reject_low 17 ALIGNMENT 70 YS2-14a06.q1k chr16 348 518 62190 62365 F 171 83.63 1349 reject_low 9 ALIGNMENT 0 YS2-14a06.q1k chr04 353 62 987321 987320 C 292 0.00 1349 reject_low 47 ALIGNMENT 25 YS2-14a06.q1k chr04 512 463 871760 871810 C 50 88.00 1349 reject_low 59 ALIGNMENT 305 YS2-14a06.q1k chr04 196 528 981164 981496 F 333 99.40 1349 reject_low 6 ALIGNMENT 307 YS2-14a06.p1k chr12 485 816 981365 981696 F 332 99.40 1330 reject_low 25 ALIGNMENT 0 YS2-14a06.q1k chr02 62 245 8899 8898 F 184 0.00 1349 reject_low 11 ALIGNMENT 0 YS2-14a06.p1k chr05 896 817 487830 487829 C 80 0.00 1330 reject_low 14 ALIGNMENT 421 YS2-14a06.q1k chr07 982 528 878526 878982 C 455 98.46 1349 reject_bad_break 0 ALIGNMENT 0 YS2-14a06.p1k chr03 817 896 168928 168927 F 80 0.00 1330 reject_low 37 ALIGNMENT 104 YS2-14a06.p1k chr11 508 772 313270 313534 F 265 83.02 1330 reject_low 49 ALIGNMENT 0 YS2-14a06.q1k chr04 62 196 986792 986791 F 135 0.00 1349 reject_low 27 ALIGNMENT 0 YS2-14a06.p1k chr14 494 62 525054 525053 C 433 0.00 1330 reject_low 7 ALIGNMENT 0 YS2-14a06.p1k chr04 551 896 871810 871809 F 346 0.00 1330 reject_low 58 ALIGNMENT 280 YS2-14a06.p1k chr11 817 495 313837 314159 C 323 97.52 1330 reject_low 2 ALIGNMENT 124 YS2-14a06.p1k chr04 508 659 987167 987320 F 152 96.71 1330 reject_low 46 ALIGNMENT 0 YS2-14a06.q1k chr03 506 885 149784 149783 F 380 0.00 1349 reject_low 42,45 ALIGNMENT 267 YS2-14a06.q1k chr14 196 518 519163 519487 F 323 96.59 1349 reject_low 7 ALIGNMENT 0 YS2-14a06.q1k chr04 62 196 871816 871815 F 135 0.00 1349 reject_low 31 ALIGNMENT 0 YS2-14a06.p1k chr04 896 818 1352634 1352633 C 79 0.00 1330 reject_low 18 ALIGNMENT 0 YS2-14a06.q1k chr11 240 62 313535 313534 C 179 0.00 1349 reject_low 50 ALIGNMENT 0 YS2-14a06.p1k chr02 896 768 8900 8899 C 129 0.00 1330 reject_low 57 ALIGNMENT 0 YS2-14a06.p1k chr11 494 62 314160 314159 C 433 0.00 1330 reject_low 2 ALIGNMENT 0 YS2-14a06.p1k chr04 896 817 986793 986792 C 80 0.00 1330 reject_low 6 ALIGNMENT 304 YS2-14a06.p1k chr15 816 485 970282 970613 C 332 99.10 1330 reject_low 28 ALIGNMENT 0 YS2-14a06.q1k chr04 529 885 987123 987122 F 357 0.00 1349 reject_low 27 ALIGNMENT 0 YS2-14a06.p1k chr04 896 817 871817 871816 C 80 0.00 1330 reject_low 32 ALIGNMENT 63 YS2-14a06.p1k chr16 653 495 62202 62365 C 159 83.02 1330 reject_low 53 ALIGNMENT 99 YS2-14a06.p1k chr03 495 816 124141 124462 F 322 80.12 1330 reject_low 52 ALIGNMENT 0 YS2-14a06.q1k chr16 62 247 62726 62725 F 186 0.00 1349 reject_low 56 ALIGNMENT 0 YS2-14a06.p1k chr13 896 817 768548 768547 C 80 0.00 1330 reject_low 22 ALIGNMENT 152 YS2-14a06.p1k chr05 642 816 449142 449316 F 175 97.71 1330 reject_low 44 ALIGNMENT 0 YS2-14a06.q1k chr07 62 194 811450 811449 F 133 0.00 1349 reject_low 29 ALIGNMENT 0 YS2-14a06.p1k chr04 62 500 871760 871759 F 439 0.00 1330 reject_low 58 ALIGNMENT 59 YS2-14a06.p1k chr03 541 817 142803 143078 F 277 76.90 1330 reject_low 55 ALIGNMENT 146 YS2-14a06.p1k chr07 817 973 878977 879133 F 157 98.73 1330 reject_bad_break 1 ALIGNMENT 0 YS2-14a06.p1k chr16 483 62 62722 62721 C 422 0.00 1330 reject_low 9 ALIGNMENT 0 YS2-14a06.q1k chr03 885 519 124142 124141 C 367 0.00 1349 reject_low 51 ALIGNMENT 0 YS2-14a06.p1k chr07 62 482 568743 568742 F 421 0.00 1330 reject_low 19 ALIGNMENT 0 YS2-14a06.q1k chr01 885 519 160250 160249 C 367 0.00 1349 reject_low 40 ALIGNMENT 0 YS2-14a06.p1k chr03 818 896 143078 143077 F 79 0.00 1330 reject_low 55 ALIGNMENT 266 YS2-14a06.q1k chr14 197 518 524730 525053 F 322 96.58 1349 reject_low 39 ALIGNMENT 271 YS2-14a06.p1k chr03 495 816 168605 168928 F 322 96.89 1330 reject_low 37 ALIGNMENT 0 YS2-14a06.q1k chr03 196 62 168929 168928 C 135 0.00 1349 reject_low 36 ALIGNMENT 293 YS2-14a06.p1k chr07 818 485 811450 811783 C 334 97.90 1330 reject_low 30 ALIGNMENT 100 YS2-14a06.q1k chr03 518 197 124141 124462 C 322 80.43 1349 reject_low 51 ALIGNMENT 0 YS2-14a06.q1k chr05 196 62 135940 135939 C 135 0.00 1349 reject_low 21 ALIGNMENT 0 YS2-14a06.p1k chr15 896 817 970283 970282 C 80 0.00 1330 reject_low 28 ALIGNMENT 294 YS2-14a06.q1k chr07 195 528 811450 811783 F 334 98.20 1349 reject_low 29 ALIGNMENT 0 YS2-14a06.q1k chr03 62 194 151516 151515 F 133 0.00 1349 reject_low 48 ALIGNMENT 0 YS2-14a06.q1k chr04 529 885 981496 981495 F 357 0.00 1349 reject_low 6 ALIGNMENT 0 YS2-14a06.p1k chr16 896 817 62390 62389 C 80 0.00 1330 reject_low 9 ALIGNMENT 0 YS2-14a06.q1k chr15 529 885 976240 976239 F 357 0.00 1349 reject_low 24 ALIGNMENT 0 YS2-14a06.q1k chr04 62 195 981164 981163 F 134 0.00 1349 reject_low 6 ALIGNMENT 0 YS2-14a06.p1k chr03 494 62 151839 151838 C 433 0.00 1330 reject_low 42 ALIGNMENT 0 YS2-14a06.q1k chr12 196 62 981697 981696 C 135 0.00 1349 reject_low 4 ALIGNMENT 0 YS2-14a06.q1k chr11 62 195 313837 313836 F 134 0.00 1349 reject_low 35 ALIGNMENT 0 YS2-14a06.p1k chr05 482 62 449629 449628 C 421 0.00 1330 reject_low 33 ALIGNMENT 0 YS2-14a06.q1k chr03 885 519 168606 168605 C 367 0.00 1349 reject_low 36 ALIGNMENT 0 YS2-14a06.q1k chr02 348 885 9000 8999 F 538 0.00 1349 reject_low 11 ALIGNMENT 0 YS2-14a06.q1k chr15 529 885 970613 970612 F 357 0.00 1349 reject_low 5 ALIGNMENT 0 YS2-14a06.p1k chr07 486 816 878983 878976 F 331 0.00 1330 reject_bad_break 1 ALIGNMENT 307 YS2-14a06.p1k chr15 816 485 975909 976240 C 332 99.40 1330 reject_low 5 ALIGNMENT 0 YS2-14a06.p1k chr15 896 817 975910 975909 C 80 0.00 1330 reject_low 5 ALIGNMENT 0 YS2-14a06.q1k chr05 885 372 449143 449142 C 514 0.00 1349 reject_low 43 ALIGNMENT 60 YS2-14a06.q1k chr03 472 196 142803 143078 C 277 77.26 1349 reject_low 54 ALIGNMENT 281 YS2-14a06.q1k chr11 196 518 313837 314159 F 323 97.83 1349 reject_low 35 ALIGNMENT 0 YS2-14a06.q1k chr04 462 62 871811 871810 C 401 0.00 1349 reject_low 59 ALIGNMENT 306 YS2-14a06.q1k chr07 530 197 568743 569076 C 334 99.40 1349 reject_low 16 ALIGNMENT 0 YS2-14a06.p1k chr14 896 818 519164 519163 C 79 0.00 1330 reject_low 38 ALIGNMENT 289 YS2-14a06.p1k chr05 794 483 449317 449628 C 312 99.36 1330 reject_low 33 ALIGNMENT 266 YS2-14a06.p1k chr14 817 495 519163 519487 C 323 96.28 1330 reject_low 38 ALIGNMENT 0 YS2-14a06.q1k chr12 196 62 976586 976585 C 135 0.00 1349 reject_low 17 ALIGNMENT 309 YS2-14a06.q1k chr02 195 528 9091 9424 F 334 99.70 1349 reject_low 15 ALIGNMENT 0 YS2-14a06.p1k chr16 665 62 62827 62826 C 604 0.00 1330 reject_low 10 ALIGNMENT 0 YS2-14a06.q1k chr05 196 62 449317 449316 C 135 0.00 1349 reject_low 43 ALIGNMENT 0 YS2-14a06.p1k chr03 507 62 149785 149784 C 446 0.00 1330 reject_low 45 ALIGNMENT 0 YS2-14a06.p1k chr01 62 494 160249 160248 F 433 0.00 1330 reject_low 8 ALIGNMENT 0 YS2-14a06.q1k chr11 885 506 313271 313270 C 380 0.00 1349 reject_low 50 ALIGNMENT 0 YS2-14a06.p1k chr04 484 62 987124 987123 C 423 0.00 1330 reject_low 6 ALIGNMENT 0 YS2-14a06.q1k chr04 62 236 1352962 1352961 F 175 0.00 1349 reject_low 60 ALIGNMENT 308 YS2-14a06.p1k chr02 818 485 9091 9424 C 334 99.40 1330 reject_low 11 ALIGNMENT 0 YS2-14a06.p1k chr03 817 896 124462 124461 F 80 0.00 1330 reject_low 52 ALIGNMENT 0 YS2-14a06.p1k chr03 896 774 149524 149523 C 123 0.00 1330 reject_low 45 ALIGNMENT 0 YS2-14a06.p1k chr11 896 330 302558 302557 C 567 0.00 1330 reject_low 3 ALIGNMENT 206 YS2-14a06.p1k chr01 495 816 165837 166163 F 322 90.37 1330 reject_low 41 ALIGNMENT 416 YS2-14a06.p1k chr07 31 485 878526 878982 F 455 98.02 1330 reject_bad_break 1 ALIGNMENT 0 YS2-14a06.q1k chr04 885 506 987168 987167 C 380 0.00 1349 reject_low 47 ALIGNMENT 69 YS2-14a06.p1k chr03 773 508 149523 149784 C 266 78.95 1330 reject_low 45 ALIGNMENT 305 YS2-14a06.p1k chr04 817 485 981164 981496 C 333 99.10 1330 reject_low 26 ALIGNMENT 104 YS2-14a06.q1k chr11 505 241 313270 313534 C 265 83.02 1349 reject_low 50 ALIGNMENT 0 YS2-14a06.q1k chr16 530 885 62721 62720 F 356 0.00 1349 reject_low 10 ALIGNMENT 305 YS2-14a06.p1k chr07 483 816 568743 569076 F 334 99.10 1330 reject_low 19 ALIGNMENT 206 YS2-14a06.p1k chr01 495 816 160249 160575 F 322 90.37 1330 reject_low 8 ALIGNMENT 0 YS2-14a06.p1k chr14 896 817 524731 524730 C 80 0.00 1330 reject_low 7 ALIGNMENT 0 YS2-14a06.p1k chr03 62 540 142803 142802 F 479 0.00 1330 reject_low 55 ALIGNMENT 0 YS2-14a06.q1k chr14 62 196 524730 524729 F 135 0.00 1349 reject_low 39 ALIGNMENT 0 YS2-14a06.p1k chr04 62 507 987167 987166 F 446 0.00 1330 reject_low 46 ALIGNMENT 0 YS2-14a06.p1k chr07 896 819 811451 811450 C 78 0.00 1330 reject_low 30 ALIGNMENT 207 YS2-14a06.q1k chr01 518 197 165837 166163 C 322 90.68 1349 reject_low 8 ALIGNMENT 98 YS2-14a06.p1k chr03 818 495 151516 151838 C 324 80.25 1330 reject_low 42 ALIGNMENT 0 YS2-14a06.q1k chr05 531 885 449628 449627 F 355 0.00 1349 reject_low 34 ALIGNMENT 0 YS2-14a06.p1k chr11 206 62 302680 302679 C 145 0.00 1330 reject_low 3 ALIGNMENT 305 YS2-14a06.p1k chr12 483 816 976252 976585 F 334 99.10 1330 reject_low 4 ALIGNMENT 0 YS2-14a06.p1k chr04 896 818 981165 981164 C 79 0.00 1330 reject_low 26 ALIGNMENT 0 YS2-14a06.q1k chr07 529 885 811783 811782 F 357 0.00 1349 reject_low 29 ALIGNMENT 0 YS2-14a06.p1k chr05 817 896 449316 449315 F 80 0.00 1330 reject_low 44 ALIGNMENT 28 YS2-14a06.p1k chr04 778 658 1352960 1353079 C 121 77.69 1330 reject_low 12 ALIGNMENT 301 YS2-14a06.p1k chr04 816 491 871816 872141 C 326 99.39 1330 reject_low 32 ALIGNMENT 0 YS2-14a06.q1k chr02 62 194 9091 9090 F 133 0.00 1349 reject_low 15 ALIGNMENT 0 YS2-14a06.q1k chr04 356 885 1353079 1353078 F 530 0.00 1349 reject_low 60 ALIGNMENT 0 YS2-14a06.p1k chr02 896 819 9092 9091 C 78 0.00 1330 reject_low 11 ALIGNMENT 272 YS2-14a06.q1k chr03 518 197 168605 168928 C 322 97.20 1349 reject_low 36 ALIGNMENT 302 YS2-14a06.q1k chr04 197 522 871816 872141 F 326 99.69 1349 reject_low 31 ALIGNMENT 69 YS2-14a06.q1k chr03 230 505 149513 149784 F 276 78.62 1349 reject_low 42,45 ALIGNMENT 0 YS2-14a06.q1k chr04 529 885 1352965 1352964 F 357 0.00 1349 reject_low 12 ALIGNMENT 0 YS2-14a06.p1k chr01 817 896 166163 166162 F 80 0.00 1330 reject_low 41 ALIGNMENT 0 YS2-14a06.p1k chr11 773 896 313534 313533 F 124 0.00 1330 reject_low 49 ALIGNMENT 308 YS2-14a06.q1k chr12 528 197 981365 981696 C 332 99.70 1349 reject_low 4 ALIGNMENT 0 YS2-14a06.p1k chr03 62 494 168605 168604 F 433 0.00 1330 reject_low 37 ALIGNMENT 0 YS2-14a06.q1k chr01 885 519 165838 165837 C 367 0.00 1349 reject_low 8 ALIGNMENT 146 YS2-14a06.q1k chr07 196 40 878977 879133 C 157 98.73 1349 reject_bad_break 0 ALIGNMENT 0 YS2-14a06.p1k chr12 817 896 981696 981695 F 80 0.00 1330 reject_low 25 ALIGNMENT 0 YS2-14a06.q1k chr15 62 196 975909 975908 F 135 0.00 1349 reject_low 24 ALIGNMENT 0 YS2-14a06.q1k chr16 348 885 62826 62825 F 538 0.00 1349 reject_low 56 ALIGNMENT 0 YS2-14a06.q1k chr05 885 530 135608 135607 C 356 0.00 1349 reject_low 21 ALIGNMENT 124 YS2-14a06.q1k chr04 505 354 987167 987320 C 152 96.71 1349 reject_low 47 ALIGNMENT 0 YS2-14a06.p1k chr07 484 62 811784 811783 C 423 0.00 1330 reject_low 30 ALIGNMENT 0 YS2-14a06.p1k chr04 657 62 1353080 1353079 C 596 0.00 1330 reject_low 12 ALIGNMENT 0 YS2-14a06.q1k chr01 196 62 166164 166163 C 135 0.00 1349 reject_low 8 ALIGNMENT 0 YS2-14a06.p1k chr01 817 896 160575 160574 F 80 0.00 1330 reject_low 8 ALIGNMENT 304 YS2-14a06.p1k chr04 816 485 986792 987123 C 332 99.10 1330 reject_low 6 ALIGNMENT 0 YS2-14a06.q1k chr14 519 885 525053 525052 F 367 0.00 1349 reject_low 39 ALIGNMENT 153 YS2-14a06.q1k chr05 371 197 449142 449316 C 175 98.29 1349 reject_low 43 ALIGNMENT 305 YS2-14a06.q1k chr15 197 528 970282 970613 F 332 99.40 1349 reject_low 5 ALIGNMENT 308 YS2-14a06.q1k chr05 529 197 135607 135939 C 333 99.70 1349 reject_low 21 ALIGNMENT 0 YS2-14a06.q1k chr03 196 62 124463 124462 C 135 0.00 1349 reject_low 51 ALIGNMENT 0 YS2-14a06.p1k chr12 62 484 981365 981364 F 423 0.00 1330 reject_low 25 ALIGNMENT 0 YS2-14a06.p1k chr16 896 766 62727 62726 C 131 0.00 1330 reject_low 10 ALIGNMENT 0 YS2-14a06.p1k chr11 896 818 313838 313837 C 79 0.00 1330 reject_low 2 ALIGNMENT 0 YS2-14a06.q1k chr11 519 885 314159 314158 F 367 0.00 1349 reject_low 35 ALIGNMENT 99 YS2-14a06.q1k chr03 195 518 151516 151838 F 324 80.56 1349 reject_low 48 ALIGNMENT 0 YS2-14a06.p1k chr15 484 62 976241 976240 C 423 0.00 1330 reject_low 5 ALIGNMENT 0 YS2-14a06.q1k chr12 885 531 976253 976252 C 355 0.00 1349 reject_low 17 ALIGNMENT 0 YS2-14a06.q1k chr16 519 885 62365 62364 F 367 0.00 1349 reject_low 9 ALIGNMENT 43 YS2-14a06.p1k chr16 765 666 62726 62826 C 100 84.00 1330 reject_low 10 ALIGNMENT 0 YS2-14a06.q1k chr04 62 195 1352633 1352632 F 134 0.00 1349 reject_low 12 ALIGNMENT 0 YS2-14a06.p1k chr12 62 482 976252 976251 F 421 0.00 1330 reject_low 4 ALIGNMENT 0 YS2-14a06.q1k chr02 529 885 9424 9423 F 357 0.00 1349 reject_low 15 ALIGNMENT 0 YS2-14a06.q1k chr03 885 473 142804 142803 C 413 0.00 1349 reject_low 54 ALIGNMENT 0 YS2-14a06.q1k chr14 519 885 519487 519486 F 367 0.00 1349 reject_low 7 ALIGNMENT 0 YS2-14a06.p1k chr07 817 896 569076 569075 F 80 0.00 1330 reject_low 19 ALIGNMENT 0 YS2-14a06.q1k chr15 62 196 970282 970281 F 135 0.00 1349 reject_low 5 ALIGNMENT 0 YS2-14a06.q1k chr13 62 196 768547 768546 F 135 0.00 1349 reject_low 20 ALIGNMENT 0 YS2-14a06.p1k chr01 62 494 165837 165836 F 433 0.00 1330 reject_low 41 ALIGNMENT 0 YS2-14a06.p1k chr12 817 896 976585 976584 F 80 0.00 1330 reject_low 4 ALIGNMENT 305 YS2-14a06.q1k chr04 197 528 986792 987123 F 332 99.40 1349 reject_low 27 ALIGNMENT 311 YS2-14a06.q1k chr04 196 528 1352633 1352965 F 333 100.00 1349 reject_low 12 ALIGNMENT 0 YS2-14a06.q1k chr05 62 196 487829 487828 F 135 0.00 1349 reject_low 13 ALIGNMENT 0 YS2-14a06.q1k chr03 519 885 151838 151837 F 367 0.00 1349 reject_low 48 ALIGNMENT 28 YS2-14a06.q1k chr02 246 347 8899 9000 F 102 79.41 1349 reject_low 11 ALIGNMENT 307 YS2-14a06.p1k chr05 484 816 135607 135939 F 333 99.40 1330 reject_low 23 ALIGNMENT 0 YS2-14a06.p1k chr04 490 62 872142 872141 C 429 0.00 1330 reject_low 32 ALIGNMENT 0 YS2-14a06.q1k chr05 62 218 449317 449316 F 157 0.00 1349 reject_low 34 ALIGNMENT 43 YS2-14a06.q1k chr16 248 347 62726 62826 F 100 84.00 1349 reject_low 56 ALIGNMENT 311 YS2-14a06.q1k chr13 197 528 768547 768878 F 332 100.00 1349 reject_low 20 ALIGNMENT 0 YS2-14a06.q1k chr04 523 885 872141 872140 F 363 0.00 1349 reject_low 31 ALIGNMENT 0 YS2-14a06.q1k chr07 196 62 569077 569076 C 135 0.00 1349 reject_low 16 ALIGNMENT 301 YS2-14a06.p1k chr16 816 484 62389 62721 C 333 98.80 1330 reject_low 9 ALIGNMENT 0 YS2-14a06.q1k chr11 807 885 302679 302678 F 79 0.00 1349 reject_low 2 ALIGNMENT 308 YS2-14a06.q1k chr15 197 528 975909 976240 F 332 99.70 1349 reject_low 24 ALIGNMENT 0 YS2-14a06.q1k chr13 529 885 768878 768877 F 357 0.00 1349 reject_low 20 ALIGNMENT 0 YS2-14a06.q1k chr16 62 196 62389 62388 F 135 0.00 1349 reject_low 10 ALIGNMENT 0 YS2-14a06.p1k chr02 484 62 9425 9424 C 423 0.00 1330 reject_low 11 ALIGNMENT 0 YS2-14a06.q1k chr16 62 347 62190 62189 F 286 0.00 1349 reject_low 9 ALIGNMENT 0 YS2-14a06.q1k chr04 885 513 871761 871760 C 373 0.00 1349 reject_low 59 ALIGNMENT 0 YS2-14a06.p1k chr04 484 62 1352966 1352965 C 423 0.00 1330 reject_low 18 ALIGNMENT 0 YS2-14a06.p1k chr16 494 62 62366 62365 C 433 0.00 1330 reject_low 53 ALIGNMENT 265 YS2-14a06.p1k chr14 816 495 524730 525053 C 322 96.27 1330 reject_low 7 ALIGNMENT 0 YS2-14a06.q1k chr11 62 683 302557 302556 F 622 0.00 1349 reject_low 2 ALIGNMENT 115 YS2-14a06.p1k chr11 329 207 302557 302679 C 123 98.37 1330 reject_low 3 ALIGNMENT 0 YS2-14a06.p1k chr05 62 483 135607 135606 F 422 0.00 1330 reject_low 23 ALIGNMENT 0 YS2-14a06.q1k chr03 195 62 143079 143078 C 134 0.00 1349 reject_low 54 ALIGNMENT 115 YS2-14a06.q1k chr11 684 806 302557 302679 F 123 98.37 1349 reject_low 2 ALIGNMENT 0 YS2-14a06.p1k chr13 484 62 768879 768878 C 423 0.00 1330 reject_low 22 ALIGNMENT 0 YS2-14a06.q1k chr03 62 229 149513 149512 F 168 0.00 1349 reject_low 42,45 ALIGNMENT 0 YS2-14a06.p1k chr04 660 896 987320 987319 F 237 0.00 1330 reject_low 46 ALIGNMENT 25 YS2-14a06.p1k chr04 501 550 871760 871810 F 50 88.00 1330 reject_low 58 ALIGNMENT 0 YS2-14a06.p1k chr11 62 507 313270 313269 F 446 0.00 1330 reject_low 49 ALIGNMENT 28 YS2-14a06.p1k chr02 767 666 8899 9000 C 102 79.41 1330 reject_low 57 ALIGNMENT 0 YS2-14a06.p1k chr16 896 654 62203 62202 C 243 0.00 1330 reject_low 53 ALIGNMENT 0 YS2-14a06.p1k chr05 896 795 449318 449317 C 102 0.00 1330 reject_low 33 ALIGNMENT 308 YS2-14a06.p1k chr05 816 483 487829 488162 C 334 99.40 1330 reject_low 14 ALIGNMENT 0 YS2-14a06.p1k chr15 484 62 970614 970613 C 423 0.00 1330 reject_low 28 ALIGNMENT 310 YS2-14a06.p1k chr13 816 485 768547 768878 C 332 99.70 1330 reject_low 22 ALIGNMENT 0 YS2-14a06.q1k chr07 885 531 568744 568743 C 355 0.00 1349 reject_low 16 ALIGNMENT 309 YS2-14a06.q1k chr05 197 530 487829 488162 F 334 99.70 1349 reject_low 13 ALIGNMENT 0 YS2-14a06.q1k chr14 62 195 519163 519162 F 134 0.00 1349 reject_low 7 ALIGNMENT 0 YS2-14a06.p1k chr05 817 896 135939 135938 F 80 0.00 1330 reject_low 23 ALIGNMENT 311 YS2-14a06.p1k chr04 817 485 1352633 1352965 C 333 99.70 1330 reject_low 18 ALIGNMENT 0 YS2-14a06.q1k chr07 527 197 878983 878976 C 331 0.00 1349 reject_bad_break 0 ALIGNMENT 0 YS2-14a06.p1k chr03 896 819 151517 151516 C 78 0.00 1330 reject_low 42 ALIGNMENT 0 YS2-14a06.p1k chr05 62 641 449142 449141 F 580 0.00 1330 reject_low 44 ALIGNMENT 0 YS2-14a06.p1k chr02 665 62 9001 9000 C 604 0.00 1330 reject_low 57 ALIGNMENT 0 YS2-14a06.p1k chr04 484 62 981497 981496 C 423 0.00 1330 reject_low 26 ALIGNMENT 0 YS2-14a06.p1k chr05 482 62 488163 488162 C 421 0.00 1330 reject_low 14 ALIGNMENT 302 YS2-14a06.q1k chr16 197 529 62389 62721 F 333 99.10 1349 reject_low 10 ALIGNMENT 207 YS2-14a06.q1k chr01 518 197 160249 160575 C 322 90.68 1349 reject_low 40 ALIGNMENT 0 YS2-14a06.p1k chr04 896 779 1352961 1352960 C 118 0.00 1330 reject_low 12 ALIGNMENT 998 YS2-14a07.q1k chr13 37 1156 385089 386227 F 1120 97.41 1340 accept 0 ALIGNMENT 869 YS2-14a07.p1k chr13 1084 36 387750 388816 C 1049 94.85 1271 accept 0 ALIGNMENT 0 YS2-14a08.p1k chr03 62 97 275454 275453 F 36 0.00 1333 reject_low 1 ALIGNMENT 0 YS2-14a08.p1k chr03 447 879 275802 275801 F 433 0.00 1333 reject_low 1 ALIGNMENT 124 YS2-14a08.p1k chr03 98 446 275454 275802 F 349 79.37 1333 reject_low 1 ALIGNMENT 1045 YS2-14a08.p1k chr14 29 1235 710026 711244 F 1207 96.69 1333 accept 0 ALIGNMENT 997 YS2-14a08.q1k chr14 1181 36 711620 712776 C 1146 96.68 1399 accept 0 ALIGNMENT 789 YS2-14a09.q1k chr04 865 28 1400402 1401241 C 838 98.57 865 accept 0 ALIGNMENT 471 YS2-14a10.p1k chr04 514 31 1138179 1138663 C 484 99.79 1285 reject_low 1 ALIGNMENT 0 YS2-14a10.p1k chr08 511 62 15244 15243 C 450 0.00 1285 accept 0 ALIGNMENT 0 YS2-14a10.p1k chr04 891 515 1138180 1138179 C 377 0.00 1285 reject_low 1 ALIGNMENT 913 YS2-14a10.q1k chr08 40 1255 13689 14911 F 1216 93.09 1438 accept 0 ALIGNMENT 479 YS2-14a10.p1k chr08 1282 512 14468 15243 C 771 88.46 1285 accept 0 ALIGNMENT 972 YS2-14a12.p1k chr07 1260 35 653934 655162 C 1226 93.72 1315 accept 0 ALIGNMENT 952 YS2-14a12.q1k chr07 40 1094 651574 652638 F 1055 97.35 1371 accept 0 ALIGNMENT 0 YS2-14a12.q1k chr12 430 849 233060 233059 F 420 0.00 1371 reject_low 1 ALIGNMENT 133 YS2-14a12.q1k chr12 63 429 232694 233060 F 367 78.75 1371 reject_low 1 ALIGNMENT 0 YS2-14a14.p1k vc_3 683 634 2442 2441 C 50 0.00 1325 reject_low 21 ALIGNMENT 0 YS2-14a14.p1k vc_1 602 62 2106 2105 C 541 0.00 1325 reject_low 2 ALIGNMENT 0 YS2-14a14.p1k vc_3 602 62 2473 2472 C 541 0.00 1325 reject_low 21 ALIGNMENT 20 YS2-14a14.p1k vc_3 581 603 2509 2531 F 23 95.65 1325 reject_low 11 ALIGNMENT 0 YS2-14a14.p1k vc_1 604 683 2531 2530 F 80 0.00 1325 reject_low 9 ALIGNMENT 20 YS2-14a14.p1k vc_1 581 603 2509 2531 F 23 95.65 1325 reject_low 9 ALIGNMENT 0 YS2-14a14.p1k vc_2 602 62 2106 2105 C 541 0.00 1325 reject_low 3 ALIGNMENT 0 YS2-14a14.q1k vc_7 62 590 13525 13524 F 529 0.00 628 reject_low 18 ALIGNMENT 0 YS2-14a14.p1k vc_3 604 683 2531 2530 F 80 0.00 1325 reject_low 11 ALIGNMENT 0 YS2-14a14.p1k vc_3 602 62 2106 2105 C 541 0.00 1325 reject_low 4 ALIGNMENT 0 YS2-14a14.p1k vc_2 62 580 2142 2141 F 519 0.00 1325 reject_low 10 ALIGNMENT 41 YS2-14a14.q1k vc_1 628 588 2472 2512 C 41 100.00 628 reject_low 14 ALIGNMENT 0 YS2-14a14.p1k vc_3 62 580 2509 2508 F 519 0.00 1325 reject_low 11 ALIGNMENT 20 YS2-14a14.p1k vc_2 581 603 2142 2164 F 23 95.65 1325 reject_low 10 ALIGNMENT 38 YS2-14a14.q1k vc_7 591 628 13525 13562 F 38 100.00 628 reject_low 18 ALIGNMENT 0 YS2-14a14.p1k vc_7 683 604 2728 2727 C 80 0.00 1325 reject_low 13 ALIGNMENT 41 YS2-14a14.q1k vc_3 628 588 2472 2512 C 41 100.00 628 reject_low 15 ALIGNMENT 26 YS2-14a14.p1k vc_1 633 603 2441 2472 C 31 96.77 1325 reject_low 20 ALIGNMENT 289 YS2-14a14.p1k vc_7 603 1050 100 550 F 448 88.84 1325 reject_low 6 ALIGNMENT 36 YS2-14a14.q1k vc_5 625 590 1 36 C 36 100.00 628 reject_low 19 ALIGNMENT 20 YS2-14a14.p1k vc_7 603 581 2727 2749 C 23 95.65 1325 reject_low 13 ALIGNMENT 289 YS2-14a14.p1k vc_5 1050 603 4575 5025 C 448 88.62 1325 reject_low 5 ALIGNMENT 0 YS2-14a14.p1k vc_5 602 62 5026 5025 C 541 0.00 1325 reject_low 5 ALIGNMENT 289 YS2-14a14.p1k vc_7 603 1050 13562 14012 F 448 88.84 1325 reject_low 7 ALIGNMENT 0 YS2-14a14.p1k vc_4 62 602 5871 5870 F 541 0.00 1325 reject_low 8 ALIGNMENT 289 YS2-14a14.p1k vc_1 1050 603 1655 2105 C 448 88.62 1325 reject_low 2 ALIGNMENT 39 YS2-14a14.q1k vc_5 628 590 5025 5063 C 39 100.00 628 reject_low 17 ALIGNMENT 546 YS2-14a14.q1k chr05 34 588 461190 461744 F 555 100.00 628 accept_chi 0 ALIGNMENT 0 YS2-14a14.q1k vc_5 589 62 5064 5063 C 528 0.00 628 reject_low 17 ALIGNMENT 289 YS2-14a14.p1k vc_3 1050 603 1655 2105 C 448 88.62 1325 reject_low 4 ALIGNMENT 0 YS2-14a14.p1k chr05 683 585 461191 461190 C 99 0.00 1325 accept_chi 1 ALIGNMENT 0 YS2-14a14.p1k vc_4 683 604 5813 5812 C 80 0.00 1325 reject_low 12 ALIGNMENT 41 YS2-14a14.q1k vc_4 588 628 5831 5871 F 41 100.00 628 reject_low 16 ALIGNMENT 0 YS2-14a14.q1k vc_1 587 62 2513 2512 C 526 0.00 628 reject_low 14 ALIGNMENT 20 YS2-14a14.p1k vc_4 603 581 5812 5834 C 23 95.65 1325 reject_low 12 ALIGNMENT 0 YS2-14a14.p1k vc_1 683 634 2442 2441 C 50 0.00 1325 reject_low 20 ALIGNMENT 0 YS2-14a14.p1k vc_2 604 683 2164 2163 F 80 0.00 1325 reject_low 10 ALIGNMENT 540 YS2-14a14.p1k chr05 584 31 461190 461744 C 554 99.82 1325 accept_chi 1 ALIGNMENT 0 YS2-14a14.p1k vc_7 580 62 2750 2749 C 519 0.00 1325 reject_low 13 ALIGNMENT 289 YS2-14a14.p1k vc_2 1050 603 1655 2105 C 448 88.62 1325 reject_low 3 ALIGNMENT 0 YS2-14a14.q1k vc_5 589 62 37 36 C 528 0.00 628 reject_low 19 ALIGNMENT 0 YS2-14a14.p1k vc_4 580 62 5835 5834 C 519 0.00 1325 reject_low 12 ALIGNMENT 26 YS2-14a14.p1k vc_3 633 603 2441 2472 C 31 96.77 1325 reject_low 21 ALIGNMENT 267 YS2-14a14.p1k vc_4 603 957 5871 6226 F 355 92.11 1325 reject_low 8 ALIGNMENT 0 YS2-14a14.q1k chr05 589 628 461744 461743 F 40 0.00 628 accept_chi 0 ALIGNMENT 0 YS2-14a14.p1k vc_7 62 602 100 99 F 541 0.00 1325 reject_low 6 ALIGNMENT 0 YS2-14a14.p1k vc_1 602 62 2473 2472 C 541 0.00 1325 reject_low 20 ALIGNMENT 0 YS2-14a14.q1k vc_3 587 62 2513 2512 C 526 0.00 628 reject_low 15 ALIGNMENT 0 YS2-14a14.p1k vc_7 62 602 13562 13561 F 541 0.00 1325 reject_low 7 ALIGNMENT 0 YS2-14a14.p1k vc_1 62 580 2509 2508 F 519 0.00 1325 reject_low 9 ALIGNMENT 0 YS2-14a14.q1k vc_4 62 587 5831 5830 F 526 0.00 628 reject_low 16 ALIGNMENT 97 YS2-14a15.p1k vc_3 196 1 1686 1875 C 196 86.22 603 reject_vc 5 ALIGNMENT 44 YS2-14a15.q1k vc_4 301 240 6275 6337 C 62 91.94 630 reject_low 11 ALIGNMENT 59 YS2-14a15.q1k vc_7 427 305 4583 4698 C 123 86.99 630 reject_vc 12 ALIGNMENT 97 YS2-14a15.p1k vc_2 196 1 1686 1875 C 196 86.22 603 reject_vc 4 ALIGNMENT 275 YS2-14a15.q1k vc_2 1 301 2322 2623 F 301 97.34 630 reject_vc 9 ALIGNMENT 0 YS2-14a15.q1k vc_7 304 302 4699 4922 C 3 0.00 630 reject_vc 12 ALIGNMENT 0 YS2-14a15.q1k vc_4 302 306 1613 1878 F 5 0.00 630 reject_vc 13 ALIGNMENT 79 YS2-14a15.p1k vc_4 1 120 6101 6219 F 120 90.00 603 reject_low 11 ALIGNMENT 97 YS2-14a15.p1k vc_1 196 1 1686 1875 C 196 86.22 603 reject_vc 3 ALIGNMENT 377 YS2-14a15.q1k vc_5 1 539 2556 3089 F 539 91.47 630 reject_vc 0 ALIGNMENT 44 YS2-14a15.q1k vc_4 301 240 48 110 C 62 91.94 630 reject_low 14 ALIGNMENT 275 YS2-14a15.q1k vc_3 1 301 2689 2990 F 301 97.34 630 reject_vc 10 ALIGNMENT 97 YS2-14a15.p1k vc_7 1 196 13792 13981 F 196 85.71 603 reject_vc 7 ALIGNMENT 97 YS2-14a15.p1k vc_6 1 196 3586 3775 F 196 85.71 603 reject_vc 6 ALIGNMENT 326 YS2-14a15.q1k vc_4 427 1 5232 5654 C 427 93.44 630 reject_vc 2 ALIGNMENT 44 YS2-14a15.q1k vc_4 240 301 1550 1612 F 62 91.94 630 reject_vc 13 ALIGNMENT 220 YS2-14a15.q1k vc_7 301 53 4923 5172 C 249 96.39 630|0,1 reject_vc 12 ALIGNMENT 377 YS2-14a15.q1k vc_7 539 1 2036 2569 C 539 91.47 630 reject_vc 1 ALIGNMENT 0 YS2-14a15.q1k vc_7 53 54 5172 6360 C 0 0.00 630 reject_vc 12 ALIGNMENT 51 YS2-14a15.q1k vc_7 54 3 6360 6411 C 52 100.00 630|1,0 reject_vc 12 ALIGNMENT 101 YS2-14a15.q1k vc_4 307 539 1879 2105 F 233 84.55 630 reject_vc 13 ALIGNMENT 275 YS2-14a15.q1k vc_1 1 301 2689 2990 F 301 97.34 630 reject_vc 8 ALIGNMENT 946 YS2-14a16.p1k chr14 1111 37 413375 414443 C 1075 97.12 1455 accept 0 ALIGNMENT 979 YS2-14a16.q1k chr14 33 1182 409450 410593 F 1150 96.35 1405 accept 0 ALIGNMENT 36 YS2-14a17.q1k vc_5 618 583 1 36 C 36 100.00 621 reject_low 7 ALIGNMENT 496 YS2-14a17.q1k chr15 581 43 831592 832125 C 539 97.77 621 accept_chi 1 ALIGNMENT 39 YS2-14a17.q1k vc_5 621 583 5025 5063 C 39 100.00 621 reject_low 5 ALIGNMENT 0 YS2-14a17.q1k vc_5 582 77 37 36 C 506 0.00 621 reject_low 7 ALIGNMENT 42 YS2-14a17.q1k vc_3 621 580 2472 2513 C 42 100.00 621 reject_low 3 ALIGNMENT 0 YS2-14a17.q1k vc_1 579 77 2514 2513 C 503 0.00 621 reject_low 2 ALIGNMENT 42 YS2-14a17.q1k vc_1 621 580 2472 2513 C 42 100.00 621 reject_low 2 ALIGNMENT 0 YS2-14a17.q1k vc_3 579 77 2514 2513 C 503 0.00 621 reject_low 3 ALIGNMENT 0 YS2-14a17.q1k vc_7 77 583 13525 13524 F 507 0.00 621 reject_low 6 ALIGNMENT 38 YS2-14a17.q1k vc_7 584 621 13525 13562 F 38 100.00 621 reject_low 6 ALIGNMENT 504 YS2-14a17.p1k chr15 31 560 831592 832122 F 530 98.49 561 accept_chi 0 ALIGNMENT 0 YS2-14a17.q1k vc_4 77 579 5830 5829 F 503 0.00 621 reject_low 4 ALIGNMENT 0 YS2-14a17.q1k vc_5 582 77 5064 5063 C 506 0.00 621 reject_low 5 ALIGNMENT 0 YS2-14a17.q1k chr15 621 582 831593 831592 C 40 0.00 621 accept_chi 1 ALIGNMENT 42 YS2-14a17.q1k vc_4 580 621 5830 5871 F 42 100.00 621 reject_low 4 ALIGNMENT 1026 YS2-14a20.p1k chr07 1299 34 1050066 1051332 C 1266 94.94 1392 accept 0 ALIGNMENT 980 YS2-14a20.q1k chr07 30 1151 1050058 1051174 F 1122 96.52 1354 accept 0 ALIGNMENT 24 YS2-14a21.p1k chr16 273 329 747642 747698 F 57 82.46 1100 reject_low 1 ALIGNMENT 133 YS2-14a21.p1k chr16 385 991 747754 748358 F 607 75.62 1100 reject_low 1 ALIGNMENT 892 YS2-14a21.p1k chr07 32 1078 668312 669345 F 1047 96.94 1100 accept 0 ALIGNMENT 1028 YS2-14a21.q1k chr07 1202 36 671819 672979 C 1167 97.17 1284 accept 0 ALIGNMENT 0 YS2-14a21.p1k chr16 62 272 747642 747641 F 211 0.00 1100 reject_low 1 ALIGNMENT 0 YS2-14a21.p1k chr16 330 384 747699 747753 F 55 0.00 1100 reject_low 1 ALIGNMENT 775 YS2-14a23.p1k chr08 877 11 128387 129248 C 867 97.69 1061 accept 0 ALIGNMENT 1064 YS2-14a23.q1k chr08 34 1218 124648 125831 F 1185 96.88 1218 accept 0 ALIGNMENT 1075 YS2-14b01.p1k chr12 1284 29 332643 333907 C 1256 96.18 1331 accept 0 ALIGNMENT 1025 YS2-14b01.q1k chr12 40 1151 328640 329753 F 1112 97.66 1376 accept 0 ALIGNMENT 906 YS2-14b02.q1k chr08 39 1075 112841 113894 F 1037 97.69 1316 accept 0 ALIGNMENT 971 YS2-14b02.p1k chr08 1146 30 112931 114057 C 1117 97.05 1312 accept 0 ALIGNMENT 0 YS2-14b03.p1k chrm 62 193 52762 52761 F 132 0.00 624 reject_low 5 ALIGNMENT 0 YS2-14b03.p1k chrm 62 201 9030 9029 F 140 0.00 624 reject_low 7 ALIGNMENT 46 YS2-14b03.p1k chrm 201 269 64514 64583 F 69 91.30 624 reject_low 4 ALIGNMENT 38 YS2-14b03.q1k chrm 443 395 34933 34981 C 49 93.88 649 reject_low 3 ALIGNMENT 0 YS2-14b03.p1k chrm 246 624 9073 9072 F 379 0.00 624 reject_low 7 ALIGNMENT 490 YS2-14b03.q1k chrm 608 39 42931 43499 C 570 99.65 649 accept_chi 0 ALIGNMENT 0 YS2-14b03.q1k chrm 394 62 34982 34981 C 333 0.00 649 reject_low 3 ALIGNMENT 0 YS2-14b03.p1k chrm 289 624 52857 52856 F 336 0.00 624 reject_low 5 ALIGNMENT 0 YS2-14b03.p1k chrm 270 624 64583 64582 F 355 0.00 624 reject_low 4 ALIGNMENT 0 YS2-14b03.q1k chrm 62 361 56992 56991 F 300 0.00 649 reject_low 2 ALIGNMENT 0 YS2-14b03.q1k chrm 649 609 42932 42931 C 41 0.00 649 accept_chi 0 ALIGNMENT 42 YS2-14b03.q1k chrm 362 441 56992 57071 F 80 86.25 649 reject_low 2 ALIGNMENT 34 YS2-14b03.p1k chrm 202 245 9030 9073 F 44 95.45 624 reject_low 7 ALIGNMENT 0 YS2-14b03.p1k chrm 259 624 66881 66880 F 366 0.00 624 reject_low 6 ALIGNMENT 39 YS2-14b03.p1k chrm 204 258 66827 66881 F 55 90.91 624 reject_low 6 ALIGNMENT 33 YS2-14b03.p1k chrm 194 288 52762 52857 F 95 80.00 624 reject_low 5 ALIGNMENT 0 YS2-14b03.q1k chrm 442 649 57071 57070 F 208 0.00 649 reject_low 2 ALIGNMENT 0 YS2-14b03.p1k chrm 607 624 43499 43498 F 18 0.00 624 accept_chi 1 ALIGNMENT 0 YS2-14b03.q1k chrm 649 444 34934 34933 C 206 0.00 649 reject_low 3 ALIGNMENT 0 YS2-14b03.p1k chrm 62 203 66827 66826 F 142 0.00 624 reject_low 6 ALIGNMENT 485 YS2-14b03.p1k chrm 37 606 42931 43499 F 570 99.30 624 accept_chi 1 ALIGNMENT 0 YS2-14b03.p1k chrm 62 200 64514 64513 F 139 0.00 624 reject_low 4 ALIGNMENT 999 YS2-14b04.q1k chr02 40 1208 476008 477197 F 1169 96.07 1364 accept 0 ALIGNMENT 377 YS2-14b04.p1k chr16 416 32 700592 700976 C 385 99.74 1383 reject_low 1 ALIGNMENT 0 YS2-14b04.p1k chr16 887 417 700593 700592 C 471 0.00 1383 reject_low 1 ALIGNMENT 1018 YS2-14b04.p1k chr02 1219 32 476843 478049 C 1188 96.38 1383 accept 0 ALIGNMENT 1026 YS2-14b06.p1k chr12 31 1180 227757 228918 F 1150 97.74 1352 accept 0 ALIGNMENT 990 YS2-14b06.q1k chr12 1156 38 230505 231637 C 1119 97.50 1357 accept 0 ALIGNMENT 1038 YS2-14b07.q1k chr13 29 1210 166424 167612 F 1182 96.11 1391 accept 0 ALIGNMENT 1015 YS2-14b07.p1k chr13 1191 36 170206 171375 C 1156 96.19 1316 accept 0 ALIGNMENT 1077 YS2-14b08.p1k chr15 1276 36 958558 959803 C 1241 96.45 1369 accept 0 ALIGNMENT 1036 YS2-14b08.q1k chr15 42 1181 955132 956283 F 1140 97.19 1394 accept 0 ALIGNMENT 967 YS2-14b09.p1k chr09 1105 27 131821 132917 C 1079 97.31 1226 accept 0 ALIGNMENT 988 YS2-14b09.q1k chr09 42 1205 128277 129451 F 1164 95.53 1405 accept 0 ALIGNMENT 991 YS2-14b10.q1k chr04 1157 39 498237 499372 C 1119 97.32 1394 accept 0 ALIGNMENT 1008 YS2-14b10.p1k chr04 32 1242 494803 496004 F 1211 96.12 1299 accept 0 ALIGNMENT 42 YS2-14b11.q1k vc_3 576 535 2472 2513 C 42 100.00 576 reject_low 4 ALIGNMENT 465 YS2-14b11.p1k chr14 35 533 346622 347118 F 499 98.60 551 accept_chi 1 ALIGNMENT 36 YS2-14b11.q1k vc_5 573 538 1 36 C 36 100.00 576 reject_low 8 ALIGNMENT 0 YS2-14b11.q1k vc_4 62 534 5830 5829 F 473 0.00 576 reject_low 5 ALIGNMENT 0 YS2-14b11.q1k vc_5 537 62 5064 5063 C 476 0.00 576 reject_low 6 ALIGNMENT 0 YS2-14b11.q1k vc_3 534 62 2514 2513 C 473 0.00 576 reject_low 4 ALIGNMENT 0 YS2-14b11.q1k vc_5 537 62 37 36 C 476 0.00 576 reject_low 8 ALIGNMENT 0 YS2-14b11.q1k vc_1 534 62 2514 2513 C 473 0.00 576 reject_low 2 ALIGNMENT 42 YS2-14b11.q1k vc_1 576 535 2472 2513 C 42 100.00 576 reject_low 2 ALIGNMENT 42 YS2-14b11.q1k vc_2 576 535 2105 2146 C 42 100.00 576 reject_low 3 ALIGNMENT 0 YS2-14b11.q1k vc_2 534 62 2147 2146 C 473 0.00 576 reject_low 3 ALIGNMENT 0 YS2-14b11.p1k chr14 534 551 347118 347117 F 18 0.00 551 accept_chi 1 ALIGNMENT 38 YS2-14b11.q1k vc_7 539 576 13525 13562 F 38 100.00 576 reject_low 7 ALIGNMENT 39 YS2-14b11.q1k vc_5 576 538 5025 5063 C 39 100.00 576 reject_low 6 ALIGNMENT 42 YS2-14b11.q1k vc_4 535 576 5830 5871 F 42 100.00 576 reject_low 5 ALIGNMENT 0 YS2-14b11.q1k chr14 576 536 346623 346622 C 41 0.00 576 accept_chi 0 ALIGNMENT 476 YS2-14b11.q1k chr14 535 39 346622 347118 C 497 99.20 576 accept_chi 0 ALIGNMENT 0 YS2-14b11.q1k vc_7 62 538 13525 13524 F 477 0.00 576 reject_low 7 ALIGNMENT 0 YS2-14b12.p1k chr02 146 122 68351 68350 C 25 0.00 1301 reject_low 4 ALIGNMENT 25 YS2-14b12.p1k chr02 215 147 68282 68350 C 69 92.75 1301 reject_low 4 ALIGNMENT 37 YS2-14b12.p1k chr04 276 164 778729 778840 C 113 94.69 1301 reject_low 5 ALIGNMENT 0 YS2-14b12.p1k chr10 205 779 470094 470093 F 575 0.00 1301 reject_low 2 ALIGNMENT 0 YS2-14b12.p1k chr13 779 287 86942 86941 C 493 0.00 1301 reject_low 3 ALIGNMENT 0 YS2-14b12.p1k chr04 779 277 778730 778729 C 503 0.00 1301 reject_low 5 ALIGNMENT 0 YS2-14b12.p1k chr10 122 230 470037 470036 F 109 0.00 1301 accept_chi 1 ALIGNMENT 0 YS2-14b12.p1k chr06 122 182 186206 186205 F 61 0.00 1301 reject_low 11 ALIGNMENT 0 YS2-14b12.p1k chr02 779 216 68283 68282 C 564 0.00 1301 reject_low 4 ALIGNMENT 20 YS2-14b12.p1k chr06 237 288 186206 186257 F 52 98.08 1301 reject_low 13 ALIGNMENT 23 YS2-14b12.p1k chr16 287 148 650471 650610 C 140 87.86 1301 reject_low 6 ALIGNMENT 22 YS2-14b12.p1k chr05 173 288 142889 143004 F 116 90.52 1301 reject_low 10 ALIGNMENT 0 YS2-14b12.p1k chr16 779 288 650472 650471 C 492 0.00 1301 reject_low 6 ALIGNMENT 0 YS2-14b12.p1k chr06 289 779 186257 186256 F 491 0.00 1301 reject_low 13 ALIGNMENT 0 YS2-14b12.p1k chr04 163 122 778841 778840 C 42 0.00 1301 reject_low 5 ALIGNMENT 0 YS2-14b12.p1k chr13 168 122 87059 87058 C 47 0.00 1301 reject_low 3 ALIGNMENT 0 YS2-14b12.p1k chr06 236 779 186258 186257 F 544 0.00 1301 reject_low 11 ALIGNMENT 20 YS2-14b12.p1k chr06 183 235 186206 186258 F 53 98.11 1301 reject_low 11 ALIGNMENT 0 YS2-14b12.p1k chr06 122 236 186206 186205 F 115 0.00 1301 reject_low 13 ALIGNMENT 0 YS2-14b12.p1k chr05 289 779 143004 143003 F 491 0.00 1301 reject_low 10 ALIGNMENT 0 YS2-14b12.p1k chr09 289 779 105815 105814 F 491 0.00 1301 reject_low 12 ALIGNMENT 26 YS2-14b12.p1k chr09 184 242 105768 105826 F 59 100.00 1301 reject_low 9 ALIGNMENT 49 YS2-14b12.p1k chr13 286 169 86941 87058 C 118 98.31 1301 reject_low 3 ALIGNMENT 103 YS2-14b12.p1k chr10 46 204 469938 470094 F 159 94.34 1301 reject_low 2 ALIGNMENT 0 YS2-14b12.p1k chr09 122 183 105768 105767 F 62 0.00 1301 reject_low 9 ALIGNMENT 0 YS2-14b12.p1k chr02 779 287 68281 68280 C 493 0.00 1301 reject_low 7 ALIGNMENT 20 YS2-14b12.p1k chr09 243 288 105770 105815 F 46 100.00 1301 reject_low 12 ALIGNMENT 0 YS2-14b12.p1k chr05 122 172 142889 142888 F 51 0.00 1301 reject_low 10 ALIGNMENT 0 YS2-14b12.p1k chr13 178 122 587739 587738 C 57 0.00 1301 reject_low 8 ALIGNMENT 795 YS2-14b12.p1k chr10 231 1171 470037 470980 F 941 95.54 1301 accept_chi 1 ALIGNMENT 0 YS2-14b12.p1k chr09 243 779 105826 105825 F 537 0.00 1301 reject_low 9 ALIGNMENT 0 YS2-14b12.p1k chr16 147 122 650611 650610 C 26 0.00 1301 reject_low 6 ALIGNMENT 0 YS2-14b12.p1k chr09 122 242 105770 105769 F 121 0.00 1301 reject_low 12 ALIGNMENT 0 YS2-14b12.p1k chr02 215 122 68351 68350 C 94 0.00 1301 reject_low 7 ALIGNMENT 28 YS2-14b12.p1k chr02 286 216 68280 68350 C 71 98.59 1301 reject_low 7 ALIGNMENT 0 YS2-14b12.p1k chr13 779 290 587629 587628 C 490 0.00 1301 reject_low 8 ALIGNMENT 922 YS2-14b12.q1k chr10 1147 31 484352 485472 C 1117 95.08 1390 accept_chi 0 ALIGNMENT 26 YS2-14b12.p1k chr13 289 179 587628 587738 C 111 90.99 1301 reject_low 8 ALIGNMENT 0 YS2-14b13.p1k chr16 62 421 442749 442748 F 360 0.00 1318 reject_low 1 ALIGNMENT 0 YS2-14b13.p1k chr16 680 769 443004 443003 F 90 0.00 1318 reject_low 1 ALIGNMENT 867 YS2-14b13.q1k chr10 31 1075 419006 420035 F 1045 96.27 1421 accept 0 ALIGNMENT 894 YS2-14b13.p1k chr10 1222 31 421388 422591 C 1192 93.79 1318 accept 0 ALIGNMENT 62 YS2-14b13.p1k chr16 422 679 442749 443004 F 258 77.13 1318 reject_low 1 ALIGNMENT 978 YS2-14b14.q1k chr04 1145 43 326893 327996 C 1103 98.01 1358 accept 0 ALIGNMENT 964 YS2-14b14.p1k chr04 24 1127 326891 327991 F 1104 97.74 1377 accept 0 ALIGNMENT 995 YS2-14b17.p1k chr11 1235 34 181633 182825 C 1202 95.92 1299 accept 0 ALIGNMENT 1004 YS2-14b17.q1k chr11 40 1320 180670 181979 F 1281 94.77 1357 accept 0 ALIGNMENT 38 YS2-14b18.q1k vc_7 327 364 63 100 F 38 100.00 364 reject_low 13 ALIGNMENT 36 YS2-14b18.q1k vc_5 361 326 1 36 C 36 100.00 364 reject_low 15 ALIGNMENT 375 YS2-14b18.p1k vc_2 617 1 1142 1749 C 617 88.49 617 reject_vc 3 ALIGNMENT 0 YS2-14b18.q1k vc_7 62 326 13525 13524 F 265 0.00 364 reject_low 14 ALIGNMENT 0 YS2-14b18.q1k vc_5 325 62 37 36 C 264 0.00 364 reject_low 15 ALIGNMENT 269 YS2-14b18.q1k chr15 36 323 220221 220508 F 288 98.26 364 accept 0 ALIGNMENT 41 YS2-14b18.q1k vc_3 364 324 2472 2512 C 41 100.00 364 reject_low 10 ALIGNMENT 0 YS2-14b18.q1k vc_5 325 62 5064 5063 C 264 0.00 364 reject_low 12 ALIGNMENT 41 YS2-14b18.q1k vc_4 324 364 5831 5871 F 41 100.00 364 reject_low 11 ALIGNMENT 375 YS2-14b18.p1k vc_3 617 1 1142 1749 C 617 88.49 617 reject_vc 4 ALIGNMENT 0 YS2-14b18.q1k vc_1 323 62 2513 2512 C 262 0.00 364 reject_low 8 ALIGNMENT 0 YS2-14b18.q1k vc_3 323 62 2513 2512 C 262 0.00 364 reject_low 10 ALIGNMENT 0 YS2-14b18.q1k vc_2 323 62 2146 2145 C 262 0.00 364 reject_low 9 ALIGNMENT 38 YS2-14b18.q1k vc_7 327 364 13525 13562 F 38 100.00 364 reject_low 14 ALIGNMENT 0 YS2-14b18.q1k vc_4 62 323 5831 5830 F 262 0.00 364 reject_low 11 ALIGNMENT 39 YS2-14b18.q1k vc_5 364 326 5025 5063 C 39 100.00 364 reject_low 12 ALIGNMENT 369 YS2-14b18.p1k vc_7 1 615 456 1062 F 615 88.13 617 reject_vc 6 ALIGNMENT 0 YS2-14b18.q1k vc_7 62 326 63 62 F 265 0.00 364 reject_low 13 ALIGNMENT 375 YS2-14b18.p1k vc_1 617 1 1142 1749 C 617 88.49 617 reject_vc 2 ALIGNMENT 0 YS2-14b18.q1k chr15 324 364 220508 220507 F 41 0.00 364 accept 0 ALIGNMENT 369 YS2-14b18.p1k vc_7 1 615 13918 14524 F 615 88.13 617 reject_vc 7 ALIGNMENT 377 YS2-14b18.p1k vc_6 1 611 3712 4314 F 611 88.71 617 reject_vc 5 ALIGNMENT 41 YS2-14b18.q1k vc_2 364 324 2105 2145 C 41 100.00 364 reject_low 9 ALIGNMENT 378 YS2-14b18.p1k vc_5 617 1 4062 4669 C 617 88.65 617 reject_vc 1 ALIGNMENT 41 YS2-14b18.q1k vc_1 364 324 2472 2512 C 41 100.00 364 reject_low 8 ALIGNMENT 974 YS2-14b19.p1k chr09 31 1120 302987 304091 F 1090 97.98 1298 accept 0 ALIGNMENT 940 YS2-14b19.q1k chr09 1117 36 304468 305567 C 1082 97.23 1284 accept 0 ALIGNMENT 0 YS2-14b20.q1k chr04 578 618 186604 186603 F 41 0.00 618 accept_chi 0 ALIGNMENT 0 YS2-14b20.q1k vc_7 62 580 13525 13524 F 519 0.00 618 reject_low 6 ALIGNMENT 36 YS2-14b20.q1k vc_5 615 580 1 36 C 36 100.00 618 reject_low 7 ALIGNMENT 0 YS2-14b20.q1k vc_5 579 62 37 36 C 518 0.00 618 reject_low 7 ALIGNMENT 41 YS2-14b20.q1k vc_3 618 578 2472 2512 C 41 100.00 618 reject_low 3 ALIGNMENT 38 YS2-14b20.q1k vc_7 581 618 13525 13562 F 38 100.00 618 reject_low 6 ALIGNMENT 0 YS2-14b20.q1k vc_1 577 62 2513 2512 C 516 0.00 618 reject_low 2 ALIGNMENT 41 YS2-14b20.q1k vc_1 618 578 2472 2512 C 41 100.00 618 reject_low 2 ALIGNMENT 517 YS2-14b20.q1k chr04 38 577 186065 186604 F 540 99.81 618 accept_chi 0 ALIGNMENT 0 YS2-14b20.q1k vc_3 577 62 2513 2512 C 516 0.00 618 reject_low 3 ALIGNMENT 513 YS2-14b20.p1k chr04 577 38 186065 186604 C 540 99.63 577 accept_chi 1 ALIGNMENT 41 YS2-14b20.q1k vc_4 578 618 5831 5871 F 41 100.00 618 reject_low 4 ALIGNMENT 0 YS2-14b20.q1k vc_5 579 62 5064 5063 C 518 0.00 618 reject_low 5 ALIGNMENT 39 YS2-14b20.q1k vc_5 618 580 5025 5063 C 39 100.00 618 reject_low 5 ALIGNMENT 0 YS2-14b20.q1k vc_4 62 577 5831 5830 F 516 0.00 618 reject_low 4 ALIGNMENT 34 YS2-14b21.p1k chr07 953 886 931413 931480 C 68 85.29 1101 reject_low 4 ALIGNMENT 31 YS2-14b21.p1k chr14 953 886 632361 632428 C 68 83.82 1101 reject_low 5 ALIGNMENT 0 YS2-14b21.q1k chr09 62 151 207130 207129 F 90 0.00 1288 reject_low 9 ALIGNMENT 1051 YS2-14b21.q1k chr07 34 1206 708836 710020 F 1173 97.36 1288 ambiguous_trans 1 ALIGNMENT 0 YS2-14b21.q1k chr07 305 883 709030 709029 F 579 0.00 1288 reject_low 6 ALIGNMENT 0 YS2-14b21.q1k chr07 62 151 709034 709033 F 90 0.00 1288 reject_low 7 ALIGNMENT 29 YS2-14b21.q1k chr07 152 226 709034 709108 F 75 80.00 1288 reject_low 7 ALIGNMENT 209 YS2-14b21.q1k chr09 34 304 206854 207126 F 271 93.36 1288 reject_low 3 ALIGNMENT 0 YS2-14b21.q1k chr09 62 229 206974 206973 F 168 0.00 1288 reject_low 8 ALIGNMENT 0 YS2-14b21.q1k chr09 305 883 207126 207125 F 579 0.00 1288 reject_low 3 ALIGNMENT 29 YS2-14b21.q1k chr07 230 304 708956 709030 F 75 80.00 1288 reject_low 6 ALIGNMENT 0 YS2-14b21.p1k chr14 885 62 632429 632428 C 824 0.00 1101 reject_low 5 ALIGNMENT 940 YS2-14b21.p1k chr05 1101 33 436380 437455 C 1069 97.66 1101 accept 0 ALIGNMENT 0 YS2-14b21.q1k chr07 227 883 709108 709107 F 657 0.00 1288 reject_low 7 ALIGNMENT 0 YS2-14b21.q1k chr09 62 151 207052 207051 F 90 0.00 1288 ambiguous_trans 2 ALIGNMENT 935 YS2-14b21.q1k chr09 152 1206 207052 208116 F 1055 96.97 1288 ambiguous_trans 2 ALIGNMENT 0 YS2-14b21.p1k chr07 885 62 931481 931480 C 824 0.00 1101 reject_low 4 ALIGNMENT 0 YS2-14b21.q1k chr07 62 229 708956 708955 F 168 0.00 1288 reject_low 6 ALIGNMENT 29 YS2-14b21.q1k chr09 230 304 206974 207048 F 75 80.00 1288 reject_low 8 ALIGNMENT 0 YS2-14b21.q1k chr09 305 883 207048 207047 F 579 0.00 1288 reject_low 8 ALIGNMENT 29 YS2-14b21.q1k chr09 152 226 207130 207204 F 75 80.00 1288 reject_low 9 ALIGNMENT 0 YS2-14b21.q1k chr09 227 883 207204 207203 F 657 0.00 1288 reject_low 9 ALIGNMENT 999 YS2-14b22.q1k chr14 34 1259 339685 340927 F 1226 94.86 1289 accept 0 ALIGNMENT 834 YS2-14b22.p1k chr14 1001 30 340786 341748 C 972 96.81 1153 accept 0 ALIGNMENT 971 YS2-14b23.p1k chr04 1089 26 237442 238504 C 1064 98.12 1097 accept 0 ALIGNMENT 982 YS2-14b23.q1k chr04 32 1155 236738 237851 F 1124 96.89 1261 accept 0 ALIGNMENT 0 YS2-14b23.p1k chr11 674 844 175012 175011 F 171 0.00 1097 reject_low 1 ALIGNMENT 21 YS2-14b23.p1k chr11 623 673 174962 175012 F 51 82.35 1097 reject_low 1 ALIGNMENT 0 YS2-14b23.p1k chr11 62 622 174962 174961 F 561 0.00 1097 reject_low 1 ALIGNMENT 22 YS2-14b24.q1k chr08 281 252 420592 420621 C 30 96.67 1362 reject_low 1 ALIGNMENT 0 YS2-14b24.q1k chr08 251 62 420622 420621 C 190 0.00 1362 reject_low 1 ALIGNMENT 971 YS2-14b24.p1k chr04 34 1111 581049 582127 F 1078 97.96 1112 accept 0 ALIGNMENT 0 YS2-14b24.q1k chr08 760 282 420593 420592 C 479 0.00 1362 reject_low 1 ALIGNMENT 807 YS2-14b24.q1k chr04 991 40 585841 586783 C 952 96.74 1362 accept 0 ALIGNMENT 376 YS2-14c01.q1k chr14 77 565 128940 129425 F 489 94.07 1435 accept 0 ALIGNMENT 891 YS2-14c04.q1k chr15 45 1085 578210 579269 F 1041 96.35 1339 accept 0 ALIGNMENT 970 YS2-14c04.p1k chr15 1182 32 581775 582939 C 1151 96.18 1292 accept 0 ALIGNMENT 27 YS2-14c05.q1k chrm 961 917 9028 9075 C 45 91.11 1341 reject_low 22 ALIGNMENT 0 YS2-14c05.q1k chrm 918 403 2137 3035 C 516 0.00 1341 reject_low 25 ALIGNMENT 0 YS2-14c05.q1k chrm 337 93 2137 2136 C 245 0.00 1341 reject_low 20 ALIGNMENT 0 YS2-14c05.q1k chrm 93 918 33449 33448 F 826 0.00 1341 reject_low 13 ALIGNMENT 0 YS2-14c05.p1k chrm 602 131 69055 69054 C 472 0.00 1328 reject_low 11 ALIGNMENT 36 YS2-14c05.p1k chrm 130 83 69054 69100 C 48 95.83 1328 reject_low 11 ALIGNMENT 0 YS2-14c05.p1k chrm 77 62 81456 81455 C 16 0.00 1328 reject_low 3 ALIGNMENT 35 YS2-14c05.q1k chrm 913 976 71208 71275 F 64 87.50 1341 reject_low 14 ALIGNMENT 34 YS2-14c05.q1k chrm 551 315 76422 76659 C 237 80.17 1341 reject_low 7 ALIGNMENT 0 YS2-14c05.q1k chrm 904 93 34343 34342 C 812 0.00 1341 reject_low 15 ALIGNMENT 36 YS2-14c05.p1k chrm 661 742 69446 69525 F 82 84.15 1328 reject_low 1 ALIGNMENT 58 YS2-14c05.q1k chrm 416 323 34251 34343 C 94 89.36 1341 reject_low 12 ALIGNMENT 0 YS2-14c05.q1k chrm 323 93 8292 8291 C 231 0.00 1341 reject_low 4 ALIGNMENT 0 YS2-14c05.q1k chrm 405 861 33512 33511 F 457 0.00 1341 reject_low 18 ALIGNMENT 31 YS2-14c05.q1k chrm 971 917 83041 83097 C 55 89.09 1341 reject_low 19 ALIGNMENT 49 YS2-14c05.q1k chrm 338 404 33449 33512 F 67 94.03 1341 reject_low 18 ALIGNMENT 33 YS2-14c05.p1k chrm 661 742 2097 2176 F 82 82.93 1328 reject_low 4 ALIGNMENT 0 YS2-14c05.q1k chrm 861 391 2085 2084 C 471 0.00 1341 reject_low 20 ALIGNMENT 0 YS2-14c05.p1k chrm 86 62 69488 69487 C 25 0.00 1328 reject_low 10 ALIGNMENT 0 YS2-14c05.q1k chrm 710 861 9861 9860 F 152 0.00 1341 accept 0 ALIGNMENT 0 YS2-14c05.q1k chrm 861 552 76423 76422 C 310 0.00 1341 reject_low 7 ALIGNMENT 0 YS2-14c05.q1k chrm 93 917 47474 47473 F 825 0.00 1341 reject_low 21 ALIGNMENT 23 YS2-14c05.q1k chrm 959 919 2093 2136 C 41 90.24 1341 reject_low 24,25 ALIGNMENT 0 YS2-14c05.q1k chrm 916 93 9076 9075 C 824 0.00 1341 reject_low 22 ALIGNMENT 0 YS2-14c05.q1k chrm 322 93 34344 34343 C 230 0.00 1341 reject_low 12 ALIGNMENT 33 YS2-14c05.p1k chrm 661 714 81406 81458 F 54 88.89 1328 reject_low 8 ALIGNMENT 0 YS2-14c05.q1k chrm 93 912 71208 71207 F 820 0.00 1341 reject_low 14 ALIGNMENT 0 YS2-14c05.q1k chrm 410 861 71285 71284 F 452 0.00 1341 reject_low 3 ALIGNMENT 0 YS2-14c05.p1k chrm 62 660 69446 69445 F 599 0.00 1328 reject_low 1 ALIGNMENT 34 YS2-14c05.q1k chrm 959 906 80501 80557 C 54 90.74 1341 reject_low 17 ALIGNMENT 53 YS2-14c05.q1k chrm 337 404 47474 47542 F 68 94.12 1341 reject_low 16 ALIGNMENT 59 YS2-14c05.q1k chrm 332 409 71208 71285 F 78 93.59 1341 reject_low 3 ALIGNMENT 0 YS2-14c05.q1k chrm 93 336 47474 47473 F 244 0.00 1341 reject_low 16 ALIGNMENT 0 YS2-14c05.q1k chrm 798 93 8401 8400 C 706 0.00 1341 reject_low 5 ALIGNMENT 46 YS2-14c05.q1k chrm 390 338 2084 2136 C 53 96.23 1341 reject_low 20 ALIGNMENT 0 YS2-14c05.q1k chrm 93 331 71208 71207 F 239 0.00 1341 reject_low 3 ALIGNMENT 55 YS2-14c05.q1k chrm 387 295 80494 80585 C 93 89.25 1341 reject_low 1,2 ALIGNMENT 46 YS2-14c05.p1k chrm 133 78 81401 81455 C 56 96.43 1328 reject_low 3 ALIGNMENT 28 YS2-14c05.q1k chrm 918 965 47474 47524 F 48 89.58 1341 reject_low 21 ALIGNMENT 0 YS2-14c05.p1k chrm 602 140 2087 2086 C 463 0.00 1328 reject_low 9 ALIGNMENT 0 YS2-14c05.q1k chrm 335 93 83098 83097 C 243 0.00 1341 reject_low 8 ALIGNMENT 0 YS2-14c05.p1k chrm 602 134 81402 81401 C 469 0.00 1328 reject_low 3 ALIGNMENT 36 YS2-14c05.q1k chrm 969 905 34275 34342 C 65 87.69 1341 reject_low 15 ALIGNMENT 0 YS2-14c05.q1k chrm 916 93 83098 83097 C 824 0.00 1341 reject_low 19 ALIGNMENT 0 YS2-14c05.q1k chrm 316 93 9096 9095 C 224 0.00 1341 reject_low 24 ALIGNMENT 0 YS2-14c05.q1k chrm 390 904 2804 9475 F 515 0.00 1341 reject_low 23 ALIGNMENT 45 YS2-14c05.q1k chrm 905 969 9476 9543 F 65 92.31 1341 reject_low 23 ALIGNMENT 465 YS2-14c05.q1k chrm 41 709 9190 9861 F 669 98.95 1341 accept 0 ALIGNMENT 0 YS2-14c05.p1k chrm 62 660 69056 69055 F 599 0.00 1328 reject_low 2 ALIGNMENT 0 YS2-14c05.p1k chrm 88 62 2137 2136 C 27 0.00 1328 reject_low 9 ALIGNMENT 35 YS2-14c05.p1k chrm 642 702 10377 10436 F 61 86.89 1328 reject_low 6 ALIGNMENT 0 YS2-14c05.q1k chrm 905 93 80558 80557 C 813 0.00 1341 reject_low 17 ALIGNMENT 30 YS2-14c05.p1k chrm 661 710 69056 69105 F 50 88.00 1328 reject_low 2 ALIGNMENT 32 YS2-14c05.q1k chrm 919 979 33449 33510 F 61 88.52 1341 reject_low 13 ALIGNMENT 54 YS2-14c05.q1k chrm 406 317 9006 9095 C 90 90.00 1341 reject_low 24 ALIGNMENT 57 YS2-14c05.q1k chrm 329 389 2742 2803 F 61 98.36 1341 reject_low 23 ALIGNMENT 0 YS2-14c05.q1k chrm 93 337 33449 33448 F 245 0.00 1341 reject_low 18 ALIGNMENT 0 YS2-14c05.p1k chrm 602 136 69439 69438 C 467 0.00 1328 reject_low 10 ALIGNMENT 0 YS2-14c05.q1k chrm 861 392 83044 83043 C 470 0.00 1341 reject_low 8 ALIGNMENT 0 YS2-14c05.q1k chrm 861 417 34252 34251 C 445 0.00 1341 reject_low 12 ALIGNMENT 0 YS2-14c05.q1k chrm 314 93 76660 76659 C 222 0.00 1341 reject_low 7 ALIGNMENT 0 YS2-14c05.q1k chrm 337 93 3102 3101 C 245 0.00 1341 reject_low 25 ALIGNMENT 23 YS2-14c05.q1k chrm 969 799 8223 8400 C 171 78.95 1341 reject_low 5 ALIGNMENT 40 YS2-14c05.p1k chrm 139 89 2086 2136 C 51 94.12 1328 reject_low 9 ALIGNMENT 0 YS2-14c05.q1k chrm 861 388 80495 80494 C 474 0.00 1341 reject_low 1,2 ALIGNMENT 50 YS2-14c05.q1k chrm 391 336 83043 83097 C 56 98.21 1341 reject_low 8 ALIGNMENT 0 YS2-14c05.p1k chrm 62 660 2097 2096 F 599 0.00 1328 reject_low 4 ALIGNMENT 0 YS2-14c05.q1k chrm 93 328 2742 2741 F 236 0.00 1341 reject_low 23 ALIGNMENT 49 YS2-14c05.q1k chrm 402 338 3036 3101 C 65 92.31 1341 reject_low 25 ALIGNMENT 0 YS2-14c05.p1k chrm 82 62 69101 69100 C 21 0.00 1328 reject_low 11 ALIGNMENT 0 YS2-14c05.q1k chrm 405 861 47542 47541 F 457 0.00 1341 reject_low 16 ALIGNMENT 61 YS2-14c05.q1k chrm 392 324 8222 8291 C 69 97.10 1341 reject_low 4 ALIGNMENT 0 YS2-14c05.p1k chrm 62 660 81406 81405 F 599 0.00 1328 reject_low 8 ALIGNMENT 0 YS2-14c05.q1k chrm 294 93 80586 80585 C 202 0.00 1341 reject_low 1,2 ALIGNMENT 0 YS2-14c05.p1k chrm 62 641 10377 10376 F 580 0.00 1328 reject_low 6 ALIGNMENT 40 YS2-14c05.p1k chrm 135 87 69438 69487 C 49 95.92 1328 reject_low 10 ALIGNMENT 0 YS2-14c05.q1k chrm 861 393 8223 8222 C 469 0.00 1341 reject_low 4 ALIGNMENT 345 YS2-14c05.p1k chrm 655 29 9865 10495 C 627 94.42 1328 accept 0 ALIGNMENT 0 YS2-14c05.q1k chrm 918 407 2137 9005 C 512 0.00 1341 reject_low 24 ALIGNMENT 997 YS2-14c06.q1k chr12 1209 39 465406 466604 C 1171 95.99 1392 manual 1 ALIGNMENT 0 YS2-14c06.p1k chr12 212 62 150541 150540 C 151 0.00 1359 accept_chi 0 ALIGNMENT 797 YS2-14c06.p1k chr12 1137 213 149608 150540 C 925 96.76 1359 accept_chi 0 ALIGNMENT 989 YS2-14c06.q1k chr12 1187 39 456294 457467 C 1149 96.26 1392 manual 2 ALIGNMENT 0 YS2-14c07.q1k vc_5 252 62 37 36 C 191 0.00 291 reject_low 8 ALIGNMENT 0 YS2-14c07.q1k vc_2 250 62 2146 2145 C 189 0.00 291 reject_low 3 ALIGNMENT 39 YS2-14c07.q1k vc_5 291 253 5025 5063 C 39 100.00 291 reject_low 6 ALIGNMENT 0 YS2-14c07.q1k chr04 291 251 209733 209732 C 41 0.00 291 accept_chi 0 ALIGNMENT 199 YS2-14c07.q1k chr04 250 40 209732 209942 C 211 99.05 291 accept_chi 0 ALIGNMENT 36 YS2-14c07.q1k vc_5 288 253 1 36 C 36 100.00 291 reject_low 8 ALIGNMENT 41 YS2-14c07.q1k vc_3 291 251 2472 2512 C 41 100.00 291 reject_low 4 ALIGNMENT 0 YS2-14c07.q1k vc_4 62 250 5831 5830 F 189 0.00 291 reject_low 5 ALIGNMENT 161 YS2-14c07.p1k chr04 30 238 209732 209942 F 209 93.30 256 accept_chi 1 ALIGNMENT 38 YS2-14c07.q1k vc_7 254 291 13525 13562 F 38 100.00 291 reject_low 7 ALIGNMENT 41 YS2-14c07.q1k vc_1 291 251 2472 2512 C 41 100.00 291 reject_low 2 ALIGNMENT 0 YS2-14c07.q1k vc_5 252 62 5064 5063 C 191 0.00 291 reject_low 6 ALIGNMENT 0 YS2-14c07.p1k chr04 239 256 209942 209941 F 18 0.00 256 accept_chi 1 ALIGNMENT 0 YS2-14c07.q1k vc_1 250 62 2513 2512 C 189 0.00 291 reject_low 2 ALIGNMENT 0 YS2-14c07.q1k vc_3 250 62 2513 2512 C 189 0.00 291 reject_low 4 ALIGNMENT 0 YS2-14c07.q1k vc_7 62 253 13525 13524 F 192 0.00 291 reject_low 7 ALIGNMENT 41 YS2-14c07.q1k vc_4 251 291 5831 5871 F 41 100.00 291 reject_low 5 ALIGNMENT 41 YS2-14c07.q1k vc_2 291 251 2105 2145 C 41 100.00 291 reject_low 3 ALIGNMENT 1026 YS2-14c08.p1k chr14 1218 30 374574 375773 C 1189 96.72 1296 accept 0 ALIGNMENT 73 YS2-14c08.p1k chr06 842 944 157910 158015 F 103 91.26 1296 reject_low 1 ALIGNMENT 70 YS2-14c08.p1k chr16 842 925 622537 622622 F 84 95.24 1296 reject_low 9 ALIGNMENT 71 YS2-14c08.p1k chr04 838 928 1095361 1095453 F 91 93.41 1296 reject_low 4 ALIGNMENT 0 YS2-14c08.p1k chr13 841 62 352370 352369 C 780 0.00 1296 reject_low 5 ALIGNMENT 0 YS2-14c08.p1k chr04 62 837 1095361 1095360 F 776 0.00 1296 reject_low 4 ALIGNMENT 70 YS2-14c08.p1k chr16 842 925 560195 560280 F 84 95.24 1296 reject_low 8 ALIGNMENT 941 YS2-14c08.q1k chr14 41 1097 369424 370496 F 1057 97.54 1366 accept 0 ALIGNMENT 0 YS2-14c08.p1k chr08 62 837 237846 237845 F 776 0.00 1296 reject_low 3 ALIGNMENT 0 YS2-14c08.p1k chr02 841 62 36486 36485 C 780 0.00 1296 reject_low 2 ALIGNMENT 70 YS2-14c08.p1k chr07 842 925 440721 440806 F 84 95.24 1296 reject_low 7 ALIGNMENT 0 YS2-14c08.p1k chr16 62 841 622537 622536 F 780 0.00 1296 reject_low 9 ALIGNMENT 72 YS2-14c08.p1k chr08 838 933 237846 237944 F 96 92.71 1296 reject_low 3 ALIGNMENT 0 YS2-14c08.p1k chr06 62 841 157910 157909 F 780 0.00 1296 reject_low 1 ALIGNMENT 78 YS2-14c08.p1k chr02 933 842 36392 36485 C 92 95.65 1296 reject_low 2 ALIGNMENT 0 YS2-14c08.p1k chr16 62 841 560195 560194 F 780 0.00 1296 reject_low 8 ALIGNMENT 0 YS2-14c08.p1k chr08 62 841 358481 358480 F 780 0.00 1296 reject_low 6 ALIGNMENT 0 YS2-14c08.p1k chr07 62 841 440721 440720 F 780 0.00 1296 reject_low 7 ALIGNMENT 73 YS2-14c08.p1k chr13 934 842 352275 352369 C 93 93.55 1296 reject_low 5 ALIGNMENT 71 YS2-14c08.p1k chr08 842 933 358481 358575 F 92 93.48 1296 reject_low 6 ALIGNMENT 886 YS2-14c09.p1k chr06 32 1034 187683 188688 F 1003 97.11 1333 accept 0 ALIGNMENT 25 YS2-14c09.q1k chr05 439 392 435223 435271 C 48 87.50 1377 reject_low 4 ALIGNMENT 0 YS2-14c09.q1k chr04 894 723 1150822 1150821 C 172 0.00 1377 reject_low 2 ALIGNMENT 134 YS2-14c09.q1k chr15 609 771 274672 274836 F 163 95.09 1377 reject_low 1 ALIGNMENT 98 YS2-14c09.q1k chr12 610 715 784354 784458 F 106 98.11 1377 reject_low 3 ALIGNMENT 100 YS2-14c09.q1k chr04 722 606 1150821 1150937 C 117 96.58 1377 reject_low 2 ALIGNMENT 0 YS2-14c09.q1k chr05 440 894 442980 442979 F 455 0.00 1377 reject_low 5 ALIGNMENT 0 YS2-14c09.q1k chr05 62 391 442932 442931 F 330 0.00 1377 reject_low 5 ALIGNMENT 0 YS2-14c09.q1k chr15 62 608 274672 274671 F 547 0.00 1377 reject_low 1 ALIGNMENT 0 YS2-14c09.q1k chr05 894 440 435224 435223 C 455 0.00 1377 reject_low 4 ALIGNMENT 0 YS2-14c09.q1k chr04 605 62 1150938 1150937 C 544 0.00 1377 reject_low 2 ALIGNMENT 992 YS2-14c09.q1k chr06 1266 31 190931 192179 C 1236 94.74 1377 accept 0 ALIGNMENT 0 YS2-14c09.q1k chr05 391 62 435272 435271 C 330 0.00 1377 reject_low 4 ALIGNMENT 22 YS2-14c09.q1k chr05 392 439 442932 442980 F 48 85.42 1377 reject_low 5 ALIGNMENT 0 YS2-14c09.q1k chr12 716 894 784458 784457 F 179 0.00 1377 reject_low 3 ALIGNMENT 0 YS2-14c09.q1k chr15 772 894 274836 274835 F 123 0.00 1377 reject_low 1 ALIGNMENT 0 YS2-14c09.q1k chr12 62 609 784354 784353 F 548 0.00 1377 reject_low 3 ALIGNMENT 952 YS2-14c10.p1k chr04 1143 34 166124 167258 C 1110 96.22 1356 accept 0 ALIGNMENT 1050 YS2-14c10.q1k chr04 41 1259 162839 164071 F 1219 96.72 1409 accept 0 ALIGNMENT 1021 YS2-14c12.p1k chr15 1205 24 825116 826311 C 1182 96.45 1424 accept 0 ALIGNMENT 1043 YS2-14c12.q1k chr15 39 1245 821145 822363 F 1207 96.77 1410 accept 0 ALIGNMENT 841 YS2-14c13.p1k chr12 1110 29 305107 306201 C 1082 94.82 1319 accept 0 ALIGNMENT 1019 YS2-14c13.q1k chr12 30 1252 301182 302396 F 1223 95.83 1378 accept 0 ALIGNMENT 923 YS2-14c15.p1k chr02 29 1155 495751 496896 F 1127 95.92 1249 accept 0 ALIGNMENT 1041 YS2-14c15.q1k chr02 1218 41 496736 497924 C 1178 97.28 1336 accept 0 ALIGNMENT 990 YS2-14c16.q1k chr15 31 1175 528273 529424 F 1145 96.59 1360 accept 0 ALIGNMENT 1050 YS2-14c16.p1k chr15 1310 30 528508 529781 C 1281 95.24 1360 accept 0 ALIGNMENT 937 YS2-14c18.q1k chr14 1107 41 535518 536583 C 1067 96.72 1381 accept_chi 1 ALIGNMENT 951 YS2-14c18.p1k chr14 34 1106 535521 536589 F 1073 97.20 1337 accept_chi 0 ALIGNMENT 1087 YS2-14c19.q1k chr02 42 1255 774669 775890 F 1214 96.79 1317 accept 0 ALIGNMENT 1036 YS2-14c19.p1k chr02 1258 33 777417 778651 C 1226 96.57 1259 accept 0 ALIGNMENT 1075 YS2-14c20.p1k chr10 34 1283 437777 439034 F 1250 96.40 1303 accept 0 ALIGNMENT 1026 YS2-14c20.q1k chr10 1243 38 438324 439531 C 1206 96.10 1356 accept 0 ALIGNMENT 760 YS2-14c21.q1k chr16 1025 42 838329 839302 C 984 94.21 1340 reject_low 1 ALIGNMENT 837 YS2-14c21.q1k chr07 1025 38 764194 765171 C 988 96.66 1340 accept 0 ALIGNMENT 959 YS2-14c21.p1k chr07 31 1201 759173 760338 F 1171 95.05 1225 accept 0 ALIGNMENT 0 YS2-14c22.q1k vc_4 62 237 1548 1547 F 176 0.00 840 reject_low 4 ALIGNMENT 65 YS2-14c22.q1k vc_4 304 238 6273 6339 C 67 100.00 840 reject_low 10 ALIGNMENT 0 YS2-14c22.q1k vc_4 389 305 47 46 C 85 0.00 840 reject_low 9 ALIGNMENT 0 YS2-14c22.q1k vc_7 304 304 4700 4921 C 1 0.00 840 reject_low 8 ALIGNMENT 0 YS2-14c22.q1k vc_4 305 307 1615 1878 F 3 0.00 840 reject_low 4 ALIGNMENT 0 YS2-14c22.q1k vc_4 389 305 6274 6273 C 85 0.00 840 reject_low 10 ALIGNMENT 0 YS2-14c22.q1k vc_7 53 54 5172 6360 C 0 0.00 840 reject_low 8 ALIGNMENT 0 YS2-14c22.q1k vc_2 304 389 2624 2623 F 86 0.00 840 reject_low 6 ALIGNMENT 229 YS2-14c22.p1k chr13 264 27 647462 647700 C 238 99.16 283 accept 0 ALIGNMENT 51 YS2-14c22.q1k vc_7 54 3 6360 6411 C 52 100.00 840|1,0 reject_low 8 ALIGNMENT 302 YS2-14c22.q1k vc_2 1 303 2322 2624 F 303 100.00 840 reject_low 6 ALIGNMENT 65 YS2-14c22.q1k vc_4 238 304 1548 1614 F 67 100.00 840 reject_low 4 ALIGNMENT 65 YS2-14c22.q1k vc_4 304 238 46 112 C 67 100.00 840 reject_low 9 ALIGNMENT 302 YS2-14c22.q1k vc_1 1 303 2689 2991 F 303 100.00 840 reject_low 5 ALIGNMENT 111 YS2-14c22.q1k vc_7 421 305 4583 4699 C 117 98.29 840 reject_low 8 ALIGNMENT 598 YS2-14c22.q1k vc_7 830 1 1753 2569 C 830 92.05 840 reject_vc 1 ALIGNMENT 0 YS2-14c22.p1k chr13 283 265 647463 647462 C 19 0.00 283 accept 0 ALIGNMENT 0 YS2-14c22.q1k vc_3 304 389 2991 2990 F 86 0.00 840 reject_low 7 ALIGNMENT 409 YS2-14c22.q1k vc_4 421 1 5232 5654 C 421 99.05 840 reject_low 3 ALIGNMENT 0 YS2-14c22.q1k vc_4 237 62 113 112 C 176 0.00 840 reject_low 9 ALIGNMENT 0 YS2-14c22.q1k vc_4 237 62 6340 6339 C 176 0.00 840 reject_low 10 ALIGNMENT 286 YS2-14c22.q1k vc_4 308 774 1879 2335 F 467 89.29 840 reject_low 4 ALIGNMENT 247 YS2-14c22.q1k vc_7 303 53 4922 5172 C 251 99.60 840|0,1 reject_low 8 ALIGNMENT 302 YS2-14c22.q1k vc_3 1 303 2689 2991 F 303 100.00 840 reject_low 7 ALIGNMENT 598 YS2-14c22.q1k vc_5 1 774 2556 3319 F 774 93.67 840 reject_vc 2 ALIGNMENT 0 YS2-14c22.q1k vc_1 304 389 2991 2990 F 86 0.00 840 reject_low 5 ALIGNMENT 63 YS2-14c23.q1k chr10 787 528 28315 28574 C 260 76.15 1239 reject_low 3 ALIGNMENT 0 YS2-14c23.q1k chr09 874 788 20846 20932 C 87 0.00 1239 reject_low 4 ALIGNMENT 0 YS2-14c23.q1k chr09 655 62 21065 21064 C 594 0.00 1239 reject_low 4 ALIGNMENT 89 YS2-14c23.q1k chr08 600 1056 287187 287641 F 457 73.96 1239 reject_low 1 ALIGNMENT 0 YS2-14c23.q1k chr08 62 599 287187 287186 F 538 0.00 1239 reject_low 1 ALIGNMENT 973 YS2-14c23.q1k chr12 1182 39 291248 292401 C 1144 96.24 1239 accept 0 ALIGNMENT 0 YS2-14c23.q1k chr10 527 62 28575 28574 C 466 0.00 1239 reject_low 3 ALIGNMENT 1000 YS2-14c23.p1k chr12 29 1235 287455 288670 F 1207 95.69 1259 accept 0 ALIGNMENT 25 YS2-14c23.q1k chr09 949 875 20772 20845 C 75 81.33 1239 reject_low 4 ALIGNMENT 97 YS2-14c23.q1k chr04 569 934 1154280 1154645 F 366 76.23 1239 reject_low 2 ALIGNMENT 0 YS2-14c23.q1k chr10 862 788 28316 28315 C 75 0.00 1239 reject_low 3 ALIGNMENT 0 YS2-14c23.q1k chr04 62 568 1154280 1154279 F 507 0.00 1239 reject_low 2 ALIGNMENT 38 YS2-14c23.q1k chr09 787 656 20933 21064 C 132 78.03 1239 reject_low 4 ALIGNMENT 956 YS2-14d01.p1k chr07 1112 29 415915 416992 C 1084 97.23 1371 accept 0 ALIGNMENT 913 YS2-14d01.q1k chr07 30 1069 415894 416936 F 1040 97.12 1356 accept 0 ALIGNMENT 0 YS2-14d02.q1k vc_7 53 54 5172 6360 C 0 0.00 805 reject_vc 8 ALIGNMENT 65 YS2-14d02.q1k vc_4 304 238 6273 6339 C 67 100.00 805 reject_low 10 ALIGNMENT 395 YS2-14d02.q1k vc_4 421 1 5232 5654 C 421 98.34 805 reject_vc 3 ALIGNMENT 0 YS2-14d02.q1k vc_4 62 237 1548 1547 F 176 0.00 805 reject_vc 7 ALIGNMENT 65 YS2-14d02.q1k vc_4 238 304 1548 1614 F 67 100.00 805 reject_vc 7 ALIGNMENT 65 YS2-14d02.q1k vc_4 304 238 46 112 C 67 100.00 805 reject_low 9 ALIGNMENT 333 YS2-14d02.p1k chr12 380 34 727431 727777 C 347 98.85 399 accept 0 ALIGNMENT 461 YS2-14d02.q1k vc_5 1 634 2556 3188 F 634 92.27 805 reject_vc 1 ALIGNMENT 302 YS2-14d02.q1k vc_1 1 303 2689 2991 F 303 100.00 805 reject_vc 4 ALIGNMENT 51 YS2-14d02.q1k vc_7 54 3 6360 6411 C 52 100.00 805|1,0 reject_vc 8 ALIGNMENT 459 YS2-14d02.q1k vc_7 586 1 1988 2569 C 586 94.37 805 reject_vc 2 ALIGNMENT 302 YS2-14d02.q1k vc_3 1 303 2689 2991 F 303 100.00 805 reject_vc 6 ALIGNMENT 302 YS2-14d02.q1k vc_2 1 303 2322 2624 F 303 100.00 805 reject_vc 5 ALIGNMENT 0 YS2-14d02.q1k vc_4 305 307 1615 1878 F 3 0.00 805 reject_vc 7 ALIGNMENT 151 YS2-14d02.q1k vc_4 308 634 1879 2204 F 327 85.02 805 reject_vc 7 ALIGNMENT 247 YS2-14d02.q1k vc_7 303 53 4922 5172 C 251 99.60 805|0,1 reject_vc 8 ALIGNMENT 0 YS2-14d02.q1k vc_7 304 304 4700 4921 C 1 0.00 805 reject_vc 8 ALIGNMENT 96 YS2-14d02.q1k vc_7 421 305 4583 4699 C 117 95.73 805 reject_vc 8 ALIGNMENT 0 YS2-14d02.p1k chr12 399 381 727432 727431 C 19 0.00 399 accept 0 ALIGNMENT 0 YS2-14d02.q1k vc_4 237 62 113 112 C 176 0.00 805 reject_low 9 ALIGNMENT 0 YS2-14d02.q1k vc_4 237 62 6340 6339 C 176 0.00 805 reject_low 10 ALIGNMENT 992 YS2-14d03.q1k chr07 30 1219 635936 637144 F 1190 96.05 1367 accept 0 ALIGNMENT 1040 YS2-14d03.p1k chr07 1318 37 636085 637362 C 1282 95.55 1321 accept 0 ALIGNMENT 984 YS2-14d04.q1k chr15 1228 30 816370 817583 C 1199 95.25 1396 accept 0 ALIGNMENT 1037 YS2-14d04.p1k chr15 34 1291 811756 813024 F 1258 95.63 1306 accept 0 ALIGNMENT 959 YS2-14d06.q1k chr12 41 1113 920708 921796 F 1073 96.92 1379 accept 0 ALIGNMENT 0 YS2-14d06.p1k chr12 627 62 925500 925499 C 566 0.00 1378 accept 0 ALIGNMENT 0 YS2-14d06.p1k chr04 629 877 1259975 1259974 F 249 0.00 1378 reject_low 1 ALIGNMENT 574 YS2-14d06.p1k chr04 31 628 1259379 1259975 F 598 99.83 1378 reject_low 1 ALIGNMENT 329 YS2-14d06.p1k chr12 1064 628 925046 925499 C 437 94.05 1378 accept 0 ALIGNMENT 1078 YS2-14d08.p1k chr11 1254 30 534290 535524 C 1225 96.16 1297 accept 0 ALIGNMENT 1025 YS2-14d08.q1k chr11 41 1191 531007 532164 F 1151 97.74 1392 accept 0 ALIGNMENT 312 YS2-14d09.q1k vc_1 700 1126 2531 2974 F 427 92.74 1359 reject_low 2 ALIGNMENT 159 YS2-14d09.q1k vc_4 700 861 6353 6514 F 162 100.00 1359|1,0 reject_low 9 ALIGNMENT 0 YS2-14d09.q1k vc_2 659 62 2146 2145 C 598 0.00 1359 reject_low 13 ALIGNMENT 0 YS2-14d09.q1k vc_4 699 62 1535 1534 C 638 0.00 1359 reject_low 11 ALIGNMENT 36 YS2-14d09.q1k vc_5 697 662 1 36 C 36 100.00 1359 reject_low 17 ALIGNMENT 0 YS2-14d09.q1k vc_4 62 659 5831 5830 F 598 0.00 1359 reject_low 9 ALIGNMENT 87 YS2-14d09.q1k vc_4 788 700 1446 1534 C 89 100.00 1359 reject_low 11 ALIGNMENT 0 YS2-14d09.q1k vc_1 62 699 2531 2530 F 638 0.00 1359 reject_low 2 ALIGNMENT 0 YS2-14d09.q1k vc_5 862 701 5026 5025 C 162 0.00 1359 reject_low 15 ALIGNMENT 0 YS2-14d09.q1k vc_7 62 662 13525 13524 F 601 0.00 1359 reject_low 16 ALIGNMENT 0 YS2-14d09.q1k vc_4 62 699 126 125 F 638 0.00 1359 reject_low 8 ALIGNMENT 41 YS2-14d09.q1k vc_4 660 700 5831 5871 F 41 100.00 1359 reject_low 9 ALIGNMENT 159 YS2-14d09.q1k vc_4 700 861 126 287 F 162 100.00 1359 reject_low 8 ALIGNMENT 0 YS2-14d09.q1k vc_7 859 62 6412 6411 C 798 0.00 1359 reject_low 10 ALIGNMENT 39 YS2-14d09.q1k vc_5 700 662 5025 5063 C 39 100.00 1359 reject_low 15 ALIGNMENT 106 YS2-14d09.q1k vc_7 1126 909 4939 5172 C 218 85.78 1359|0,1 reject_low 10 ALIGNMENT 0 YS2-14d09.q1k vc_7 699 62 2728 2727 C 638 0.00 1359 reject_low 6 ALIGNMENT 0 YS2-14d09.q1k vc_5 862 698 2 1 C 165 0.00 1359 reject_low 17 ALIGNMENT 0 YS2-14d09.q1k vc_3 62 699 2531 2530 F 638 0.00 1359 reject_low 4 ALIGNMENT 0 YS2-14d09.q1k vc_5 661 62 37 36 C 600 0.00 1359 reject_low 17 ALIGNMENT 46 YS2-14d09.q1k vc_7 910 860 6360 6411 C 51 98.04 1359|1,0 reject_low 10 ALIGNMENT 41 YS2-14d09.q1k vc_2 700 660 2105 2145 C 41 100.00 1359 reject_low 13 ALIGNMENT 305 YS2-14d09.q1k vc_4 1126 700 5367 5812 C 427 92.27 1359 reject_low 7 ALIGNMENT 0 YS2-14d09.q1k vc_1 862 701 2473 2472 C 162 0.00 1359 reject_low 12 ALIGNMENT 41 YS2-14d09.q1k vc_3 700 660 2472 2512 C 41 100.00 1359 reject_low 14 ALIGNMENT 0 YS2-14d09.q1k vc_5 661 62 5064 5063 C 600 0.00 1359 reject_low 15 ALIGNMENT 38 YS2-14d09.q1k vc_7 663 700 13525 13562 F 38 100.00 1359 reject_low 16 ALIGNMENT 312 YS2-14d09.q1k vc_5 700 1126 2398 2841 F 427 92.74 1359 reject_low 5 ALIGNMENT 0 YS2-14d09.q1k vc_1 659 62 2513 2512 C 598 0.00 1359 reject_low 12 ALIGNMENT 590 YS2-14d09.p1k chr13 32 654 882284 882906 F 623 99.04 672 accept_chi 1 ALIGNMENT 0 YS2-14d09.q1k vc_4 862 789 1447 1446 C 74 0.00 1359 reject_low 11 ALIGNMENT 0 YS2-14d09.q1k vc_4 701 700 5872 6353 F 0 0.00 1359 reject_low 9 ALIGNMENT 0 YS2-14d09.q1k vc_4 699 62 5813 5812 C 638 0.00 1359 reject_low 7 ALIGNMENT 0 YS2-14d09.q1k vc_7 909 910 5172 6360 C 0 0.00 1359 reject_low 10 ALIGNMENT 591 YS2-14d09.q1k chr13 660 39 882284 882905 C 622 99.20 1359 accept_chi 0 ALIGNMENT 0 YS2-14d09.q1k vc_2 62 699 2164 2163 F 638 0.00 1359 reject_low 3 ALIGNMENT 312 YS2-14d09.q1k vc_3 700 1126 2531 2974 F 427 92.74 1359 reject_low 4 ALIGNMENT 312 YS2-14d09.q1k vc_7 1126 700 2284 2727 C 427 92.74 1359 reject_low 6 ALIGNMENT 0 YS2-14d09.q1k vc_3 659 62 2513 2512 C 598 0.00 1359 reject_low 14 ALIGNMENT 0 YS2-14d09.q1k vc_7 701 862 13562 13561 F 162 0.00 1359 reject_low 16 ALIGNMENT 0 YS2-14d09.q1k vc_5 62 699 2398 2397 F 638 0.00 1359 reject_low 5 ALIGNMENT 41 YS2-14d09.q1k vc_1 700 660 2472 2512 C 41 100.00 1359 reject_low 12 ALIGNMENT 0 YS2-14d09.q1k chr13 862 661 882285 882284 C 202 0.00 1359 accept_chi 0 ALIGNMENT 0 YS2-14d09.p1k chr13 655 672 882906 882905 F 18 0.00 672 accept_chi 1 ALIGNMENT 0 YS2-14d09.q1k vc_3 862 701 2473 2472 C 162 0.00 1359 reject_low 14 ALIGNMENT 0 YS2-14d09.q1k vc_2 862 701 2106 2105 C 162 0.00 1359 reject_low 13 ALIGNMENT 312 YS2-14d09.q1k vc_2 700 1126 2164 2607 F 427 92.74 1359 reject_low 3 ALIGNMENT 985 YS2-14d10.q1k chr04 1208 29 86611 87786 C 1180 95.59 1422 accept 0 ALIGNMENT 1068 YS2-14d10.p1k chr04 33 1213 86326 87512 F 1181 97.54 1384 accept 0 ALIGNMENT 41 YS2-14d11.q1k vc_1 302 262 2472 2512 C 41 100.00 302 reject_vc 6 ALIGNMENT 41 YS2-14d11.q1k vc_3 302 262 2472 2512 C 41 100.00 302 reject_vc 7 ALIGNMENT 196 YS2-14d11.q1k chr01 261 29 14640 14873 C 233 95.71 302 ambiguous_tel 4 ALIGNMENT 0 YS2-14d11.p1k chr08 282 264 538021 538020 C 19 0.00 282 ambiguous_tel 3 ALIGNMENT 0 YS2-14d11.q1k vc_1 261 62 2513 2512 C 200 0.00 302 reject_vc 6 ALIGNMENT 0 YS2-14d11.q1k chr01 302 262 14641 14640 C 41 0.00 302 ambiguous_tel 4 ALIGNMENT 36 YS2-14d11.q1k vc_5 299 264 1 36 C 36 100.00 302 reject_low 11 ALIGNMENT 222 YS2-14d11.p1k chr01 263 31 217409 217641 C 233 99.14 282 ambiguous_tel 2 ALIGNMENT 41 YS2-14d11.q1k vc_4 262 302 5831 5871 F 41 100.00 302 reject_vc 8 ALIGNMENT 0 YS2-14d11.q1k vc_7 62 264 13525 13524 F 203 0.00 302 reject_low 10 ALIGNMENT 224 YS2-14d11.q1k chr01 29 261 217409 217641 F 233 99.57 302 ambiguous_tel 0 ALIGNMENT 38 YS2-14d11.q1k vc_7 265 302 13525 13562 F 38 100.00 302 reject_low 10 ALIGNMENT 0 YS2-14d11.q1k vc_5 263 62 37 36 C 202 0.00 302 reject_low 11 ALIGNMENT 39 YS2-14d11.q1k vc_5 302 264 5025 5063 C 39 100.00 302 reject_low 9 ALIGNMENT 0 YS2-14d11.q1k chr08 262 302 538252 538251 F 41 0.00 302 ambiguous_tel 1 ALIGNMENT 0 YS2-14d11.q1k chr01 262 302 217641 217640 F 41 0.00 302 ambiguous_tel 0 ALIGNMENT 0 YS2-14d11.q1k vc_3 261 62 2513 2512 C 200 0.00 302 reject_vc 7 ALIGNMENT 194 YS2-14d11.p1k chr01 31 263 14640 14873 F 233 95.28 282 ambiguous_tel 5 ALIGNMENT 224 YS2-14d11.q1k chr08 29 261 538020 538252 F 233 99.57 302 ambiguous_tel 1 ALIGNMENT 0 YS2-14d11.q1k vc_5 263 62 5064 5063 C 202 0.00 302 reject_low 9 ALIGNMENT 0 YS2-14d11.p1k chr01 282 264 217410 217409 C 19 0.00 282 ambiguous_tel 2 ALIGNMENT 0 YS2-14d11.q1k vc_4 62 261 5831 5830 F 200 0.00 302 reject_vc 8 ALIGNMENT 222 YS2-14d11.p1k chr08 263 31 538020 538252 C 233 99.14 282 ambiguous_tel 3 ALIGNMENT 0 YS2-14d11.p1k chr01 264 282 14873 14872 F 19 0.00 282 ambiguous_tel 5 ALIGNMENT 40 YS2-14d12.q1k vc_4 546 585 5832 5871 F 40 100.00 585 reject_low 5 ALIGNMENT 40 YS2-14d12.q1k vc_3 585 546 2472 2511 C 40 100.00 585 reject_low 4 ALIGNMENT 0 YS2-14d12.q1k vc_5 546 62 5064 5063 C 485 0.00 585 reject_low 6 ALIGNMENT 0 YS2-14d12.p1k chr06 535 552 59480 59479 F 18 0.00 552 accept_chi 1 ALIGNMENT 38 YS2-14d12.q1k vc_7 548 585 13525 13562 F 38 100.00 585 reject_low 7 ALIGNMENT 489 YS2-14d12.q1k chr06 545 39 58974 59480 C 507 99.80 585 accept_chi 0 ALIGNMENT 484 YS2-14d12.p1k chr06 29 534 58974 59480 F 506 99.60 552 accept_chi 1 ALIGNMENT 0 YS2-14d12.q1k vc_3 545 62 2512 2511 C 484 0.00 585 reject_low 4 ALIGNMENT 0 YS2-14d12.q1k vc_4 62 545 5832 5831 F 484 0.00 585 reject_low 5 ALIGNMENT 36 YS2-14d12.q1k vc_5 582 547 1 36 C 36 100.00 585 reject_low 8 ALIGNMENT 39 YS2-14d12.q1k vc_5 585 547 5025 5063 C 39 100.00 585 reject_low 6 ALIGNMENT 0 YS2-14d12.q1k chr06 585 546 58975 58974 C 40 0.00 585 accept_chi 0 ALIGNMENT 0 YS2-14d12.q1k vc_2 545 62 2145 2144 C 484 0.00 585 reject_low 3 ALIGNMENT 0 YS2-14d12.q1k vc_1 545 62 2512 2511 C 484 0.00 585 reject_low 2 ALIGNMENT 40 YS2-14d12.q1k vc_2 585 546 2105 2144 C 40 100.00 585 reject_low 3 ALIGNMENT 0 YS2-14d12.q1k vc_5 546 62 37 36 C 485 0.00 585 reject_low 8 ALIGNMENT 0 YS2-14d12.q1k vc_7 62 547 13525 13524 F 486 0.00 585 reject_low 7 ALIGNMENT 40 YS2-14d12.q1k vc_1 585 546 2472 2511 C 40 100.00 585 reject_low 2 ALIGNMENT 0 YS2-14d13.q1k chr12 62 932 1719 1718 F 871 0.00 1399 ambiguous_tel 45 ALIGNMENT 62 YS2-14d13.q1k chr16 1154 1006 946338 946492 C 149 83.22 1399 ambiguous_tel 47 ALIGNMENT 31 YS2-14d13.q1k chr08 1004 944 560446 560506 C 61 85.25 1399 ambiguous_tel 238 ALIGNMENT 0 YS2-14d13.q1k chr16 932 62 946099 946098 C 871 0.00 1399 ambiguous_tel 183 ALIGNMENT 0 YS2-14d13.q1k chr07 968 62 1089395 1089394 C 907 0.00 1399 ambiguous_tel 90 ALIGNMENT 46 YS2-14d13.q1k chr05 1057 933 575011 575137 C 125 81.60 1399 ambiguous_tel 143 ALIGNMENT 42 YS2-14d13.q1k chr05 998 933 574964 575029 C 66 89.39 1399 ambiguous_tel 176 ALIGNMENT 61 YS2-14d13.q1k chr10 933 1027 1957 2053 F 95 90.53 1399 ambiguous_tel 115 ALIGNMENT 39 YS2-14d13.q1k chr13 932 1080 1918 2069 F 149 77.85 1399 ambiguous_tel 188 ALIGNMENT 43 YS2-14d13.q1k chr12 1106 944 1069633 1069799 C 163 77.91 1399 ambiguous_tel 156 ALIGNMENT 78 YS2-14d13.q1k chr12 944 1154 1874 2091 F 211 81.52 1399 ambiguous_tel 42 ALIGNMENT 0 YS2-14d13.q1k chr04 932 62 1530201 1530200 C 871 0.00 1399 ambiguous_tel 193 ALIGNMENT 0 YS2-14d13.q1k chr02 62 943 1821 1820 F 882 0.00 1399 ambiguous_tel 116 ALIGNMENT 0 YS2-14d13.q1k chr04 943 62 1530154 1530153 C 882 0.00 1399 ambiguous_tel 205 ALIGNMENT 0 YS2-14d13.q1k chr12 932 62 1069955 1069954 C 871 0.00 1399 ambiguous_tel 52 ALIGNMENT 42 YS2-14d13.q1k chr12 1091 936 1076383 1076542 C 156 78.21 1399 ambiguous_tel 174 ALIGNMENT 0 YS2-14d13.q1k chr02 62 932 1522 1521 F 871 0.00 1399 ambiguous_tel 26 ALIGNMENT 32 YS2-14d13.q1k chr08 932 987 1866 1921 F 56 87.50 1399 ambiguous_tel 233 ALIGNMENT 37 YS2-14d13.q1k chr13 944 1004 2002 2062 F 61 88.52 1399 ambiguous_tel 214 ALIGNMENT 70 YS2-14d13.q1k chr12 1154 933 1076389 1076617 C 222 79.73 1399 ambiguous_tel 53 ALIGNMENT 66 YS2-14d13.q1k chr10 933 1153 1813 2040 F 221 79.19 1399 ambiguous_tel 65 ALIGNMENT 0 YS2-14d13.q1k chr16 62 935 1630 1629 F 874 0.00 1399 ambiguous_tel 166 ALIGNMENT 0 YS2-14d13.q1k chr12 943 62 1076463 1076462 C 882 0.00 1399 ambiguous_tel 157 ALIGNMENT 0 YS2-14d13.q1k chr10 62 932 1849 1848 F 871 0.00 1399 ambiguous_tel 126 ALIGNMENT 46 YS2-14d13.q1k chr13 944 1106 1894 2060 F 163 78.53 1399 ambiguous_tel 132 ALIGNMENT 0 YS2-14d13.q1k chr12 943 62 1069800 1069799 C 882 0.00 1399 ambiguous_tel 156 ALIGNMENT 0 YS2-14d13.q1k chr10 62 932 1813 1812 F 871 0.00 1399 ambiguous_tel 65 ALIGNMENT 0 YS2-14d13.q1k chr13 62 932 1739 1738 F 871 0.00 1399 ambiguous_tel 54 ALIGNMENT 46 YS2-14d13.q1k chr12 944 1106 7553 7719 F 163 78.53 1399 ambiguous_tel 131 ALIGNMENT 33 YS2-14d13.q1k chr16 932 997 1842 1907 F 66 84.85 1399 ambiguous_tel 230 ALIGNMENT 0 YS2-14d13.q1k chr10 62 927 1880 1879 F 866 0.00 1399 ambiguous_tel 68 ALIGNMENT 0 YS2-14d13.q1k chr08 968 62 560842 560841 C 907 0.00 1399 ambiguous_tel 91 ALIGNMENT 42 YS2-14d13.q1k chr02 932 1080 1845 1996 F 149 78.52 1399 ambiguous_tel 171 ALIGNMENT 90 YS2-14d13.q1k chr16 1093 933 946186 946350 C 161 88.20 1399 ambiguous_tel 62 ALIGNMENT 45 YS2-14d13.q1k chr14 969 1154 1574 1766 F 186 77.42 1399 ambiguous_tel 96 ALIGNMENT 0 YS2-14d13.q1k chr15 932 62 1089366 1089365 C 871 0.00 1399 ambiguous_tel 197 ALIGNMENT 902 YS2-14d13.q1k chr06 43 1067 3 1030 F 1025 96.49 1399 ambiguous_tel 19 ALIGNMENT 39 YS2-14d13.q1k chr07 1080 932 1088992 1089143 C 149 77.85 1399 ambiguous_tel 185 ALIGNMENT 0 YS2-14d13.q1k chr12 931 62 1069776 1069775 C 870 0.00 1399 ambiguous_tel 199 ALIGNMENT 0 YS2-14d13.q1k chr16 943 62 946052 946051 C 882 0.00 1399 ambiguous_tel 218 ALIGNMENT 46 YS2-14d13.q1k chr05 1106 944 574924 575090 C 163 78.53 1399 ambiguous_tel 128 ALIGNMENT 0 YS2-14d13.q1k chr13 62 932 1955 1954 F 871 0.00 1399 ambiguous_tel 180 ALIGNMENT 0 YS2-14d13.q1k chr16 62 943 1710 1709 F 882 0.00 1399 ambiguous_tel 134 ALIGNMENT 64 YS2-14d13.q1k chr08 1057 933 560535 560661 C 125 86.40 1399 ambiguous_tel 107 ALIGNMENT 0 YS2-14d13.q1k chr08 943 62 560507 560506 C 882 0.00 1399 ambiguous_tel 238 ALIGNMENT 94 YS2-14d13.q1k chr02 933 1154 1522 1750 F 222 83.33 1399 ambiguous_tel 26 ALIGNMENT 0 YS2-14d13.q1k chr04 932 62 1530309 1530308 C 871 0.00 1399 ambiguous_tel 142 ALIGNMENT 0 YS2-14d13.q1k chr08 932 62 560554 560553 C 871 0.00 1399 ambiguous_tel 194 ALIGNMENT 29 YS2-14d13.q1k chr08 944 998 1806 1860 F 55 85.45 1399 ambiguous_tel 241 ALIGNMENT 0 YS2-14d13.q1k chr07 943 62 1089060 1089059 C 882 0.00 1399 ambiguous_tel 209 ALIGNMENT 0 YS2-14d13.q1k chr15 935 62 1089507 1089506 C 874 0.00 1399 ambiguous_tel 175 ALIGNMENT 0 YS2-14d13.q1k chr10 62 932 1957 1956 F 871 0.00 1399 ambiguous_tel 115 ALIGNMENT 0 YS2-14d13.q1k chr09 62 932 1758 1757 F 871 0.00 1399 ambiguous_tel 63 ALIGNMENT 43 YS2-14d13.q1k chr05 1006 1153 1472 1625 F 148 79.05 1399 ambiguous_tel 87 ALIGNMENT 0 YS2-14d13.q1k chr16 932 62 946279 946278 C 871 0.00 1399 ambiguous_tel 84 ALIGNMENT 0 YS2-14d13.q1k chr02 62 931 1881 1880 F 870 0.00 1399 ambiguous_tel 75 ALIGNMENT 49 YS2-14d13.q1k chr09 1039 1154 1686 1806 F 116 83.62 1399 ambiguous_tel 70 ALIGNMENT 971 YS2-14d13.q1k chr04 1121 43 1530295 1531378 C 1079 97.22 1399 ambiguous_tel 2 ALIGNMENT 0 YS2-14d13.q1k chr08 932 62 560806 560805 C 871 0.00 1399 ambiguous_tel 20 ALIGNMENT 43 YS2-14d13.q1k chr12 936 1093 7473 7634 F 158 78.48 1399 ambiguous_tel 163 ALIGNMENT 42 YS2-14d13.q1k chr07 998 933 1089041 1089106 C 66 89.39 1399 ambiguous_tel 177 ALIGNMENT 0 YS2-14d13.q1k chr06 62 931 1072 1071 F 870 0.00 1399 ambiguous_tel 232 ALIGNMENT 0 YS2-14d13.q1k chr05 935 62 575171 575170 C 874 0.00 1399 ambiguous_tel 160 ALIGNMENT 37 YS2-14d13.q1k chr12 1004 944 1069631 1069691 C 61 88.52 1399 ambiguous_tel 212 ALIGNMENT 0 YS2-14d13.q1k chr12 932 62 1069991 1069990 C 871 0.00 1399 ambiguous_tel 35 ALIGNMENT 45 YS2-14d13.q1k chr09 933 998 1866 1931 F 66 90.91 1399 ambiguous_tel 170 ALIGNMENT 0 YS2-14d13.q1k chr13 62 932 1847 1846 F 871 0.00 1399 ambiguous_tel 149 ALIGNMENT 42 YS2-14d13.q1k chr02 969 1121 1486 1643 F 153 78.43 1399 ambiguous_tel 137 ALIGNMENT 0 YS2-14d13.q1k chr06 62 932 1001 1000 F 871 0.00 1399 ambiguous_tel 169 ALIGNMENT 43 YS2-14d13.q1k chr04 1106 944 1530095 1530261 C 163 77.91 1399 ambiguous_tel 155 ALIGNMENT 0 YS2-14d13.q1k chr16 932 62 946387 946386 C 871 0.00 1399 ambiguous_tel 72 ALIGNMENT 43 YS2-14d13.q1k chr16 936 1093 1630 1791 F 158 78.48 1399 ambiguous_tel 166 ALIGNMENT 0 YS2-14d13.q1k chr09 62 932 1722 1721 F 871 0.00 1399 ambiguous_tel 59 ALIGNMENT 0 YS2-14d13.q1k chr07 931 62 1089036 1089035 C 870 0.00 1399 ambiguous_tel 222 ALIGNMENT 0 YS2-14d13.q1k chr15 931 62 1089403 1089402 C 870 0.00 1399 ambiguous_tel 201 ALIGNMENT 0 YS2-14d13.q1k chr05 62 932 1614 1613 F 871 0.00 1399 ambiguous_tel 27 ALIGNMENT 43 YS2-14d13.q1k chr15 1106 944 1089260 1089426 C 163 77.91 1399 ambiguous_tel 158 ALIGNMENT 45 YS2-14d13.q1k chr05 933 998 1830 1895 F 66 90.91 1399 ambiguous_tel 168 ALIGNMENT 0 YS2-14d13.q1k chr13 62 968 1667 1666 F 907 0.00 1399 ambiguous_tel 95 ALIGNMENT 88 YS2-14d13.q1k chr05 933 1154 1506 1734 F 222 82.43 1399 ambiguous_tel 28 ALIGNMENT 37 YS2-14d13.q1k chr06 944 1080 976 1115 F 137 78.10 1399 ambiguous_tel 203 ALIGNMENT 0 YS2-14d13.q1k chr16 935 62 946240 946239 C 874 0.00 1399 ambiguous_tel 167 ALIGNMENT 0 YS2-14d13.q1k chr02 62 931 1953 1952 F 870 0.00 1399 ambiguous_tel 76 ALIGNMENT 0 YS2-14d13.q1k chr05 62 932 1722 1721 F 871 0.00 1399 ambiguous_tel 136 ALIGNMENT 0 YS2-14d13.q1k chr14 62 932 1646 1645 F 871 0.00 1399 ambiguous_tel 55 ALIGNMENT 39 YS2-14d13.q1k chr12 998 933 1076336 1076401 C 66 87.88 1399 ambiguous_tel 196 ALIGNMENT 39 YS2-14d13.q1k chr15 998 933 1089300 1089365 C 66 87.88 1399 ambiguous_tel 197 ALIGNMENT 0 YS2-14d13.q1k chr02 62 943 2217 2216 F 882 0.00 1399 ambiguous_tel 122 ALIGNMENT 0 YS2-14d13.q1k chr12 932 62 1076654 1076653 C 871 0.00 1399 ambiguous_tel 36 ALIGNMENT 42 YS2-14d13.q1k chr12 933 998 2079 2144 F 66 89.39 1399 ambiguous_tel 178 ALIGNMENT 108 YS2-14d13.q1k chr12 1093 933 1076489 1076653 C 161 91.93 1399 ambiguous_tel 36 ALIGNMENT 33 YS2-14d13.q1k chr12 997 932 1069602 1069667 C 66 84.85 1399 ambiguous_tel 225 ALIGNMENT 91 YS2-14d13.q1k chr05 933 1154 1614 1842 F 222 82.88 1399 ambiguous_tel 27 ALIGNMENT 37 YS2-14d13.q1k chr16 944 1004 1818 1878 F 61 88.52 1399 ambiguous_tel 217 ALIGNMENT 42 YS2-14d13.q1k chr16 998 933 946033 946098 C 66 89.39 1399 ambiguous_tel 183 ALIGNMENT 0 YS2-14d13.q1k chr08 62 943 1806 1805 F 882 0.00 1399 ambiguous_tel 241 ALIGNMENT 43 YS2-14d13.q1k chr02 928 1080 1769 1924 F 153 78.43 1399 ambiguous_tel 124 ALIGNMENT 0 YS2-14d13.q1k chr08 62 943 1842 1841 F 882 0.00 1399 ambiguous_tel 234 ALIGNMENT 0 YS2-14d13.q1k chr02 62 932 1630 1629 F 871 0.00 1399 ambiguous_tel 58 ALIGNMENT 79 YS2-14d13.q1k chr16 1154 933 946194 946422 C 222 81.08 1399 ambiguous_tel 41 ALIGNMENT 112 YS2-14d13.q1k chr08 1154 933 560577 560805 C 222 86.04 1399 ambiguous_tel 20 ALIGNMENT 0 YS2-14d13.q1k chr02 62 943 2361 2360 F 882 0.00 1399 ambiguous_tel 239 ALIGNMENT 55 YS2-14d13.q1k chr08 933 1030 1687 1786 F 98 87.76 1399 ambiguous_tel 119 ALIGNMENT 88 YS2-14d13.q1k chr09 933 1105 1722 1898 F 173 86.13 1399 ambiguous_tel 59 ALIGNMENT 0 YS2-14d13.q1k chr12 62 943 2126 2125 F 882 0.00 1399 ambiguous_tel 210 ALIGNMENT 0 YS2-14d13.q1k chr14 62 968 1574 1573 F 907 0.00 1399 ambiguous_tel 96 ALIGNMENT 0 YS2-14d13.q1k chr12 62 932 1755 1754 F 871 0.00 1399 ambiguous_tel 43 ALIGNMENT 33 YS2-14d13.q1k chr15 997 932 1089229 1089294 C 66 84.85 1399 ambiguous_tel 229 ALIGNMENT 108 YS2-14d13.q1k chr05 1093 933 575117 575281 C 161 91.93 1399 ambiguous_tel 32 ALIGNMENT 0 YS2-14d13.q1k chr14 62 931 1933 1932 F 870 0.00 1399 ambiguous_tel 228 ALIGNMENT 108 YS2-14d13.q1k chr07 1093 933 1089194 1089358 C 161 91.93 1399 ambiguous_tel 33 ALIGNMENT 0 YS2-14d13.q1k chr07 931 62 1089144 1089143 C 870 0.00 1399 ambiguous_tel 185 ALIGNMENT 56 YS2-14d13.q1k chr04 1126 936 1530181 1530377 C 191 79.06 1399 ambiguous_tel 99 ALIGNMENT 0 YS2-14d13.q1k chr05 62 968 1470 1469 F 907 0.00 1399 ambiguous_tel 79 ALIGNMENT 0 YS2-14d13.q1k chr05 62 943 1877 1876 F 882 0.00 1399 ambiguous_tel 206 ALIGNMENT 43 YS2-14d13.q1k chr14 936 1093 1721 1882 F 158 78.48 1399 ambiguous_tel 165 ALIGNMENT 31 YS2-14d13.q1k chr08 997 944 560417 560470 C 54 87.04 1399 ambiguous_tel 240 ALIGNMENT 42 YS2-14d13.q1k chr12 933 998 7614 7679 F 66 89.39 1399 ambiguous_tel 179 ALIGNMENT 0 YS2-14d13.q1k chr14 62 943 1909 1908 F 882 0.00 1399 ambiguous_tel 215 ALIGNMENT 108 YS2-14d13.q1k chr12 933 1093 7362 7526 F 161 91.93 1399 ambiguous_tel 34 ALIGNMENT 0 YS2-14d13.q1k chr16 62 932 1663 1662 F 871 0.00 1399 ambiguous_tel 152 ALIGNMENT 33 YS2-14d13.q1k chr12 932 997 2150 2215 F 66 84.85 1399 ambiguous_tel 223 ALIGNMENT 70 YS2-14d13.q1k chr04 1154 933 1530188 1530416 C 222 79.73 1399 ambiguous_tel 48 ALIGNMENT 0 YS2-14d13.q1k chr07 932 62 1089215 1089214 C 871 0.00 1399 ambiguous_tel 144 ALIGNMENT 0 YS2-14d13.q1k chr12 62 935 7437 7436 F 874 0.00 1399 ambiguous_tel 111 ALIGNMENT 0 YS2-14d13.q1k chr05 932 62 575282 575281 C 871 0.00 1399 ambiguous_tel 32 ALIGNMENT 36 YS2-14d13.q1k chr12 1080 932 1069624 1069775 C 149 77.18 1399 ambiguous_tel 199 ALIGNMENT 39 YS2-14d13.q1k chr02 933 998 2278 2343 F 66 87.88 1399 ambiguous_tel 192 ALIGNMENT 43 YS2-14d13.q1k chr13 936 1093 1814 1975 F 158 78.48 1399 ambiguous_tel 164 ALIGNMENT 965 YS2-14d13.q1k chr13 43 1121 777 1860 F 1079 97.03 1399 ambiguous_tel 11 ALIGNMENT 0 YS2-14d13.q1k chr12 62 943 7661 7660 F 882 0.00 1399 ambiguous_tel 211 ALIGNMENT 0 YS2-14d13.q1k chr09 62 932 1794 1793 F 871 0.00 1399 ambiguous_tel 82 ALIGNMENT 42 YS2-14d13.q1k chr04 1091 936 1530182 1530341 C 156 78.21 1399 ambiguous_tel 172 ALIGNMENT 33 YS2-14d13.q1k chr13 932 997 2026 2091 F 66 84.85 1399 ambiguous_tel 227 ALIGNMENT 0 YS2-14d13.q1k chr16 932 62 946207 946206 C 871 0.00 1399 ambiguous_tel 153 ALIGNMENT 0 YS2-14d13.q1k chr02 62 932 2242 2241 F 871 0.00 1399 ambiguous_tel 139 ALIGNMENT 0 YS2-14d13.q1k chr10 62 932 1705 1704 F 871 0.00 1399 ambiguous_tel 60 ALIGNMENT 978 YS2-14d13.q1k chr16 1154 43 946266 947384 C 1112 96.58 1399 ambiguous_tel 13 ALIGNMENT 0 YS2-14d13.q1k chr15 968 62 1089654 1089653 C 907 0.00 1399 ambiguous_tel 97 ALIGNMENT 70 YS2-14d13.q1k chr12 1154 933 1069726 1069954 C 222 79.73 1399 ambiguous_tel 52 ALIGNMENT 0 YS2-14d13.q1k chr05 62 932 1830 1829 F 871 0.00 1399 ambiguous_tel 168 ALIGNMENT 0 YS2-14d13.q1k chr12 62 932 7362 7361 F 871 0.00 1399 ambiguous_tel 34 ALIGNMENT 0 YS2-14d13.q1k chr12 931 62 1076439 1076438 C 870 0.00 1399 ambiguous_tel 200 ALIGNMENT 0 YS2-14d13.q1k chr10 62 1038 1669 1668 F 977 0.00 1399 ambiguous_tel 71 ALIGNMENT 49 YS2-14d13.q1k chr10 1039 1154 1669 1789 F 116 83.62 1399 ambiguous_tel 71 ALIGNMENT 965 YS2-14d13.q1k chr08 1121 43 560648 561731 C 1079 97.03 1399 ambiguous_tel 9 ALIGNMENT 37 YS2-14d13.q1k chr12 944 1004 7661 7721 F 61 88.52 1399 ambiguous_tel 211 ALIGNMENT 39 YS2-14d13.q1k chr08 998 933 560488 560553 C 66 87.88 1399 ambiguous_tel 194 ALIGNMENT 43 YS2-14d13.q1k chr07 1093 936 1089086 1089247 C 158 78.48 1399 ambiguous_tel 161 ALIGNMENT 0 YS2-14d13.q1k chr12 62 943 2018 2017 F 882 0.00 1399 ambiguous_tel 130 ALIGNMENT 0 YS2-14d13.q1k chr15 932 62 1089618 1089617 C 871 0.00 1399 ambiguous_tel 39 ALIGNMENT 31 YS2-14d13.q1k chr05 932 974 1901 1943 F 43 93.02 1399 ambiguous_tel 219 ALIGNMENT 0 YS2-14d13.q1k chr05 62 932 1506 1505 F 871 0.00 1399 ambiguous_tel 28 ALIGNMENT 45 YS2-14d13.q1k chr13 969 1154 1667 1859 F 186 77.42 1399 ambiguous_tel 95 ALIGNMENT 55 YS2-14d13.q1k chr07 1121 936 1089093 1089283 C 186 79.03 1399 ambiguous_tel 110 ALIGNMENT 971 YS2-14d13.q1k chr12 1121 43 1076496 1077579 C 1079 97.22 1399 ambiguous_tel 4 ALIGNMENT 0 YS2-14d13.q1k chr02 62 932 2098 2097 F 871 0.00 1399 ambiguous_tel 80 ALIGNMENT 67 YS2-14d13.q1k chr08 1121 936 560540 560730 C 186 81.18 1399 ambiguous_tel 81 ALIGNMENT 968 YS2-14d13.q1k chr07 1121 43 1089201 1090284 C 1079 97.13 1399 ambiguous_tel 7 ALIGNMENT 0 YS2-14d13.q1k chr16 943 62 946160 946159 C 882 0.00 1399 ambiguous_tel 135 ALIGNMENT 0 YS2-14d13.q1k chr05 62 931 1901 1900 F 870 0.00 1399 ambiguous_tel 219 ALIGNMENT 0 YS2-14d13.q1k chr14 62 931 1825 1824 F 870 0.00 1399 ambiguous_tel 189 ALIGNMENT 81 YS2-14d13.q1k chr16 1154 944 946086 946303 C 211 81.99 1399 ambiguous_tel 30 ALIGNMENT 33 YS2-14d13.q1k chr14 932 997 1933 1998 F 66 84.85 1399 ambiguous_tel 228 ALIGNMENT 37 YS2-14d13.q1k chr05 1004 944 574922 574982 C 61 88.52 1399 ambiguous_tel 207 ALIGNMENT 0 YS2-14d13.q1k chr05 62 1005 1472 1471 F 944 0.00 1399 ambiguous_tel 87 ALIGNMENT 46 YS2-14d13.q1k chr12 1057 933 1076383 1076509 C 125 81.60 1399 ambiguous_tel 148 ALIGNMENT 961 YS2-14d13.q1k chr10 43 1152 779 1895 F 1110 96.13 1399 ambiguous_tel 18 ALIGNMENT 0 YS2-14d13.q1k chr08 62 931 1866 1865 F 870 0.00 1399 ambiguous_tel 233 ALIGNMENT 63 YS2-14d13.q1k chr02 944 1154 2073 2290 F 211 79.15 1399 ambiguous_tel 67 ALIGNMENT 0 YS2-14d13.q1k chr12 932 62 1076510 1076509 C 871 0.00 1399 ambiguous_tel 148 ALIGNMENT 60 YS2-14d13.q1k chr12 969 1121 1683 1840 F 153 82.35 1399 ambiguous_tel 85 ALIGNMENT 76 YS2-14d13.q1k chr12 933 1154 1755 1983 F 222 80.63 1399 ambiguous_tel 43 ALIGNMENT 0 YS2-14d13.q1k chr02 62 932 1918 1917 F 871 0.00 1399 ambiguous_tel 118 ALIGNMENT 0 YS2-14d13.q1k chr16 932 62 946423 946422 C 871 0.00 1399 ambiguous_tel 41 ALIGNMENT 87 YS2-14d13.q1k chr10 933 1107 1741 1919 F 175 85.71 1399 ambiguous_tel 64 ALIGNMENT 962 YS2-14d13.q1k chr14 43 1121 684 1767 F 1079 96.94 1399 ambiguous_tel 12 ALIGNMENT 60 YS2-14d13.q1k chr05 933 1107 1686 1864 F 175 80.57 1399 ambiguous_tel 105 ALIGNMENT 37 YS2-14d13.q1k chr12 1004 944 1076294 1076354 C 61 88.52 1399 ambiguous_tel 213 ALIGNMENT 0 YS2-14d13.q1k chr05 932 62 575138 575137 C 871 0.00 1399 ambiguous_tel 143 ALIGNMENT 44 YS2-14d13.q1k chr02 933 1106 1738 1915 F 174 77.59 1399 ambiguous_tel 138 ALIGNMENT 0 YS2-14d13.q1k chr12 943 62 1076355 1076354 C 882 0.00 1399 ambiguous_tel 213 ALIGNMENT 0 YS2-14d13.q1k chr12 935 62 1069916 1069915 C 874 0.00 1399 ambiguous_tel 100 ALIGNMENT 90 YS2-14d13.q1k chr02 933 1107 1630 1808 F 175 86.29 1399 ambiguous_tel 58 ALIGNMENT 0 YS2-14d13.q1k chr04 935 62 1530378 1530377 C 874 0.00 1399 ambiguous_tel 99 ALIGNMENT 33 YS2-14d13.q1k chr05 997 932 574893 574958 C 66 84.85 1399 ambiguous_tel 221 ALIGNMENT 46 YS2-14d13.q1k chr14 933 1057 1754 1880 F 125 81.60 1399 ambiguous_tel 150 ALIGNMENT 0 YS2-14d13.q1k chr02 62 927 1769 1768 F 866 0.00 1399 ambiguous_tel 124 ALIGNMENT 35 YS2-14d13.q1k chr08 933 1080 1759 1909 F 148 77.03 1399 ambiguous_tel 204 ALIGNMENT 0 YS2-14d13.q1k chr08 932 62 560590 560589 C 871 0.00 1399 ambiguous_tel 141 ALIGNMENT 0 YS2-14d13.q1k chr12 932 62 1076618 1076617 C 871 0.00 1399 ambiguous_tel 53 ALIGNMENT 968 YS2-14d13.q1k chr16 43 1121 593 1676 F 1079 97.13 1399 ambiguous_tel 8 ALIGNMENT 108 YS2-14d13.q1k chr13 933 1093 1703 1867 F 161 91.93 1399 ambiguous_tel 37 ALIGNMENT 51 YS2-14d13.q1k chr10 944 1068 1932 2059 F 125 82.40 1399 ambiguous_tel 127 ALIGNMENT 87 YS2-14d13.q1k chr09 933 1107 1758 1936 F 175 85.71 1399 ambiguous_tel 63 ALIGNMENT 0 YS2-14d13.q1k chr04 932 62 1530417 1530416 C 871 0.00 1399 ambiguous_tel 48 ALIGNMENT 63 YS2-14d13.q1k chr02 944 1093 2145 2298 F 150 83.33 1399 ambiguous_tel 104 ALIGNMENT 56 YS2-14d13.q1k chr15 1126 936 1089346 1089542 C 191 79.06 1399 ambiguous_tel 102 ALIGNMENT 90 YS2-14d13.q1k chr12 933 1093 1827 1991 F 161 88.20 1399 ambiguous_tel 61 ALIGNMENT 21 YS2-14d13.q1k chr06 969 1107 893 1035 F 139 74.10 1399 ambiguous_tel 242 ALIGNMENT 31 YS2-14d13.q1k chr02 944 997 2361 2414 F 54 87.04 1399 ambiguous_tel 239 ALIGNMENT 0 YS2-14d13.q1k chr16 62 931 1842 1841 F 870 0.00 1399 ambiguous_tel 230 ALIGNMENT 0 YS2-14d13.q1k chr07 943 62 1089168 1089167 C 882 0.00 1399 ambiguous_tel 129 ALIGNMENT 0 YS2-14d13.q1k chr12 968 62 1076690 1076689 C 907 0.00 1399 ambiguous_tel 94 ALIGNMENT 0 YS2-14d13.q1k chr16 62 932 1519 1518 F 871 0.00 1399 ambiguous_tel 40 ALIGNMENT 45 YS2-14d13.q1k chr15 1154 969 1089461 1089653 C 186 77.42 1399 ambiguous_tel 97 ALIGNMENT 0 YS2-14d13.q1k chr09 62 1005 1688 1687 F 944 0.00 1399 ambiguous_tel 24 ALIGNMENT 55 YS2-14d13.q1k chr05 1121 936 575016 575206 C 186 79.03 1399 ambiguous_tel 109 ALIGNMENT 33 YS2-14d13.q1k chr12 997 932 1076265 1076330 C 66 84.85 1399 ambiguous_tel 226 ALIGNMENT 59 YS2-14d13.q1k chr02 932 1154 1953 2182 F 223 78.03 1399 ambiguous_tel 76 ALIGNMENT 45 YS2-14d13.q1k chr07 1154 969 1089202 1089394 C 186 77.42 1399 ambiguous_tel 90 ALIGNMENT 72 YS2-14d13.q1k chr12 933 1153 1719 1946 F 221 80.09 1399 ambiguous_tel 45 ALIGNMENT 0 YS2-14d13.q1k chr13 62 935 1814 1813 F 874 0.00 1399 ambiguous_tel 164 ALIGNMENT 37 YS2-14d13.q1k chr15 1004 944 1089258 1089318 C 61 88.52 1399 ambiguous_tel 216 ALIGNMENT 39 YS2-14d13.q1k chr12 998 933 1069673 1069738 C 66 87.88 1399 ambiguous_tel 195 ALIGNMENT 33 YS2-14d13.q1k chr16 997 932 945962 946027 C 66 84.85 1399 ambiguous_tel 231 ALIGNMENT 39 YS2-14d13.q1k chr16 932 1080 1734 1885 F 149 77.85 1399 ambiguous_tel 190 ALIGNMENT 45 YS2-14d13.q1k chr12 1154 969 1069834 1070026 C 186 77.42 1399 ambiguous_tel 93 ALIGNMENT 0 YS2-14d13.q1k chr10 62 968 1669 1668 F 907 0.00 1399 ambiguous_tel 23 ALIGNMENT 0 YS2-14d13.q1k chr14 62 943 1801 1800 F 882 0.00 1399 ambiguous_tel 133 ALIGNMENT 93 YS2-14d13.q1k chr10 969 1154 1669 1861 F 186 86.02 1399 ambiguous_tel 23 ALIGNMENT 0 YS2-14d13.q1k chr16 62 931 1734 1733 F 870 0.00 1399 ambiguous_tel 190 ALIGNMENT 0 YS2-14d13.q1k chr05 943 62 575091 575090 C 882 0.00 1399 ambiguous_tel 128 ALIGNMENT 0 YS2-14d13.q1k chr10 62 932 1777 1776 F 871 0.00 1399 ambiguous_tel 77 ALIGNMENT 0 YS2-14d13.q1k chr09 62 1038 1686 1685 F 977 0.00 1399 ambiguous_tel 70 ALIGNMENT 0 YS2-14d13.q1k chr05 62 932 1578 1577 F 871 0.00 1399 ambiguous_tel 69 ALIGNMENT 34 YS2-14d13.q1k chr08 944 1004 1842 1902 F 61 86.89 1399 ambiguous_tel 234 ALIGNMENT 0 YS2-14d13.q1k chr15 932 62 1089474 1089473 C 871 0.00 1399 ambiguous_tel 151 ALIGNMENT 0 YS2-14d13.q1k chr04 935 62 1530342 1530341 C 874 0.00 1399 ambiguous_tel 172 ALIGNMENT 0 YS2-14d13.q1k chr12 62 932 1971 1970 F 871 0.00 1399 ambiguous_tel 145 ALIGNMENT 70 YS2-14d13.q1k chr05 1154 933 575017 575245 C 222 79.73 1399 ambiguous_tel 49 ALIGNMENT 0 YS2-14d13.q1k chr09 62 932 1830 1829 F 871 0.00 1399 ambiguous_tel 125 ALIGNMENT 0 YS2-14d13.q1k chr08 62 932 1687 1686 F 871 0.00 1399 ambiguous_tel 119 ALIGNMENT 62 YS2-14d13.q1k chr12 1006 1154 1685 1839 F 149 83.22 1399 ambiguous_tel 46 ALIGNMENT 39 YS2-14d13.q1k chr14 932 1080 1825 1976 F 149 77.85 1399 ambiguous_tel 189 ALIGNMENT 0 YS2-14d13.q1k chr05 62 932 1542 1541 F 871 0.00 1399 ambiguous_tel 21 ALIGNMENT 971 YS2-14d13.q1k chr12 1121 43 1069833 1070916 C 1079 97.22 1399 ambiguous_tel 3 ALIGNMENT 0 YS2-14d13.q1k chr12 935 62 1076579 1076578 C 874 0.00 1399 ambiguous_tel 101 ALIGNMENT 55 YS2-14d13.q1k chr14 936 1121 1685 1875 F 186 79.03 1399 ambiguous_tel 113 ALIGNMENT 0 YS2-14d13.q1k chr12 62 943 7553 7552 F 882 0.00 1399 ambiguous_tel 131 ALIGNMENT 46 YS2-14d13.q1k chr12 1057 933 1069720 1069846 C 125 81.60 1399 ambiguous_tel 147 ALIGNMENT 0 YS2-14d13.q1k chr16 943 62 946304 946303 C 882 0.00 1399 ambiguous_tel 30 ALIGNMENT 46 YS2-14d13.q1k chr07 1106 944 1089001 1089167 C 163 78.53 1399 ambiguous_tel 129 ALIGNMENT 37 YS2-14d13.q1k chr05 944 1004 1877 1937 F 61 88.52 1399 ambiguous_tel 206 ALIGNMENT 0 YS2-14d13.q1k chr12 62 968 1683 1682 F 907 0.00 1399 ambiguous_tel 85 ALIGNMENT 108 YS2-14d13.q1k chr15 1093 933 1089453 1089617 C 161 91.93 1399 ambiguous_tel 39 ALIGNMENT 70 YS2-14d13.q1k chr12 933 1154 7398 7626 F 222 79.73 1399 ambiguous_tel 51 ALIGNMENT 0 YS2-14d13.q1k chr02 62 932 1738 1737 F 871 0.00 1399 ambiguous_tel 138 ALIGNMENT 36 YS2-14d13.q1k chr04 1080 932 1530086 1530237 C 149 77.18 1399 ambiguous_tel 198 ALIGNMENT 59 YS2-14d13.q1k chr02 932 1154 1881 2110 F 223 78.03 1399 ambiguous_tel 75 ALIGNMENT 37 YS2-14d13.q1k chr06 944 1004 1048 1108 F 61 88.52 1399 ambiguous_tel 208 ALIGNMENT 54 YS2-14d13.q1k chr02 944 1030 2217 2305 F 87 89.66 1399 ambiguous_tel 122 ALIGNMENT 37 YS2-14d13.q1k chr16 1004 944 945991 946051 C 61 88.52 1399 ambiguous_tel 218 ALIGNMENT 0 YS2-14d13.q1k chr16 62 968 1483 1482 F 907 0.00 1399 ambiguous_tel 98 ALIGNMENT 43 YS2-14d13.q1k chr12 936 1093 1938 2099 F 158 78.48 1399 ambiguous_tel 162 ALIGNMENT 0 YS2-14d13.q1k chr02 62 932 2026 2025 F 871 0.00 1399 ambiguous_tel 74 ALIGNMENT 0 YS2-14d13.q1k chr08 943 62 560471 560470 C 882 0.00 1399 ambiguous_tel 240 ALIGNMENT 0 YS2-14d13.q1k chr06 62 943 1048 1047 F 882 0.00 1399 ambiguous_tel 208 ALIGNMENT 0 YS2-14d13.q1k chr13 62 931 2026 2025 F 870 0.00 1399 ambiguous_tel 227 ALIGNMENT 75 YS2-14d13.q1k chr16 1153 933 946231 946458 C 221 80.54 1399 ambiguous_tel 44 ALIGNMENT 108 YS2-14d13.q1k chr16 933 1093 1519 1683 F 161 91.93 1399 ambiguous_tel 40 ALIGNMENT 48 YS2-14d13.q1k chr08 933 998 1723 1788 F 66 92.42 1399 ambiguous_tel 140 ALIGNMENT 0 YS2-14d13.q1k chr15 932 62 1089582 1089581 C 871 0.00 1399 ambiguous_tel 56 ALIGNMENT 48 YS2-14d13.q1k chr05 933 1067 1722 1859 F 135 80.74 1399 ambiguous_tel 136 ALIGNMENT 51 YS2-14d13.q1k chr10 933 1067 1849 1986 F 135 81.48 1399 ambiguous_tel 126 ALIGNMENT 0 YS2-14d13.q1k chr05 931 62 574959 574958 C 870 0.00 1399 ambiguous_tel 221 ALIGNMENT 46 YS2-14d13.q1k chr16 1057 933 946080 946206 C 125 81.60 1399 ambiguous_tel 153 ALIGNMENT 61 YS2-14d13.q1k chr05 933 1121 1650 1843 F 189 79.89 1399 ambiguous_tel 83 ALIGNMENT 0 YS2-14d13.q1k chr13 62 931 1918 1917 F 870 0.00 1399 ambiguous_tel 188 ALIGNMENT 33 YS2-14d13.q1k chr12 932 997 7685 7750 F 66 84.85 1399 ambiguous_tel 224 ALIGNMENT 28 YS2-14d13.q1k chr10 933 964 2029 2060 F 32 96.88 1399 ambiguous_tel 236 ALIGNMENT 42 YS2-14d13.q1k chr15 1091 936 1089347 1089506 C 156 78.21 1399 ambiguous_tel 175 ALIGNMENT 0 YS2-14d13.q1k chr12 62 931 7685 7684 F 870 0.00 1399 ambiguous_tel 224 ALIGNMENT 0 YS2-14d13.q1k chr08 62 932 1723 1722 F 871 0.00 1399 ambiguous_tel 140 ALIGNMENT 0 YS2-14d13.q1k chr05 62 932 1650 1649 F 871 0.00 1399 ambiguous_tel 83 ALIGNMENT 48 YS2-14d13.q1k chr02 933 998 2242 2307 F 66 92.42 1399 ambiguous_tel 139 ALIGNMENT 37 YS2-14d13.q1k chr05 944 1080 1805 1944 F 137 78.10 1399 ambiguous_tel 202 ALIGNMENT 0 YS2-14d13.q1k chr12 62 931 2150 2149 F 870 0.00 1399 ambiguous_tel 223 ALIGNMENT 0 YS2-14d13.q1k chr02 62 943 2145 2144 F 882 0.00 1399 ambiguous_tel 104 ALIGNMENT 0 YS2-14d13.q1k chr12 932 62 1069847 1069846 C 871 0.00 1399 ambiguous_tel 147 ALIGNMENT 46 YS2-14d13.q1k chr16 1106 944 945993 946159 C 163 78.53 1399 ambiguous_tel 135 ALIGNMENT 46 YS2-14d13.q1k chr16 933 1057 1663 1789 F 125 81.60 1399 ambiguous_tel 152 ALIGNMENT 0 YS2-14d13.q1k chr12 931 62 1069668 1069667 C 870 0.00 1399 ambiguous_tel 225 ALIGNMENT 0 YS2-14d13.q1k chr02 62 932 2278 2277 F 871 0.00 1399 ambiguous_tel 192 ALIGNMENT 0 YS2-14d13.q1k chr12 62 932 7506 7505 F 871 0.00 1399 ambiguous_tel 146 ALIGNMENT 46 YS2-14d13.q1k chr07 1057 933 1089088 1089214 C 125 81.60 1399 ambiguous_tel 144 ALIGNMENT 46 YS2-14d13.q1k chr12 944 1106 2018 2184 F 163 78.53 1399 ambiguous_tel 130 ALIGNMENT 70 YS2-14d13.q1k chr16 933 1154 1555 1783 F 222 79.73 1399 ambiguous_tel 57 ALIGNMENT 0 YS2-14d13.q1k chr07 935 62 1089248 1089247 C 874 0.00 1399 ambiguous_tel 161 ALIGNMENT 0 YS2-14d13.q1k chr12 62 1005 1685 1684 F 944 0.00 1399 ambiguous_tel 46 ALIGNMENT 0 YS2-14d13.q1k chr08 935 62 560731 560730 C 874 0.00 1399 ambiguous_tel 81 ALIGNMENT 43 YS2-14d13.q1k chr05 1093 936 575009 575170 C 158 78.48 1399 ambiguous_tel 160 ALIGNMENT 37 YS2-14d13.q1k chr14 944 1004 1909 1969 F 61 88.52 1399 ambiguous_tel 215 ALIGNMENT 46 YS2-14d13.q1k chr04 1057 933 1530182 1530308 C 125 81.60 1399 ambiguous_tel 142 ALIGNMENT 0 YS2-14d13.q1k chr16 932 62 946351 946350 C 871 0.00 1399 ambiguous_tel 62 ALIGNMENT 72 YS2-14d13.q1k chr09 933 1067 1794 1931 F 135 86.67 1399 ambiguous_tel 82 ALIGNMENT 0 YS2-14d13.q1k chr12 62 932 7398 7397 F 871 0.00 1399 ambiguous_tel 51 ALIGNMENT 0 YS2-14d13.q1k chr08 62 1005 1653 1652 F 944 0.00 1399 ambiguous_tel 120 ALIGNMENT 93 YS2-14d13.q1k chr09 969 1154 1686 1878 F 186 86.02 1399 ambiguous_tel 22 ALIGNMENT 0 YS2-14d13.q1k chr08 943 62 560615 560614 C 882 0.00 1399 ambiguous_tel 123 ALIGNMENT 46 YS2-14d13.q1k chr15 1057 933 1089347 1089473 C 125 81.60 1399 ambiguous_tel 151 ALIGNMENT 0 YS2-14d13.q1k chr04 943 62 1530262 1530261 C 882 0.00 1399 ambiguous_tel 155 ALIGNMENT 48 YS2-14d13.q1k chr08 998 933 560524 560589 C 66 92.42 1399 ambiguous_tel 141 ALIGNMENT 0 YS2-14d13.q1k chr06 62 943 976 975 F 882 0.00 1399 ambiguous_tel 203 ALIGNMENT 108 YS2-14d13.q1k chr04 1093 933 1530288 1530452 C 161 91.93 1399 ambiguous_tel 31 ALIGNMENT 0 YS2-14d13.q1k chr12 62 935 1902 1901 F 874 0.00 1399 ambiguous_tel 103 ALIGNMENT 0 YS2-14d13.q1k chr02 62 943 2325 2324 F 882 0.00 1399 ambiguous_tel 237 ALIGNMENT 0 YS2-14d13.q1k chr14 62 935 1685 1684 F 874 0.00 1399 ambiguous_tel 113 ALIGNMENT 0 YS2-14d13.q1k chr16 62 935 1594 1593 F 874 0.00 1399 ambiguous_tel 114 ALIGNMENT 0 YS2-14d13.q1k chr13 62 935 1778 1777 F 874 0.00 1399 ambiguous_tel 112 ALIGNMENT 0 YS2-14d13.q1k chr05 931 62 575067 575066 C 870 0.00 1399 ambiguous_tel 184 ALIGNMENT 0 YS2-14d13.q1k chr10 62 943 1932 1931 F 882 0.00 1399 ambiguous_tel 127 ALIGNMENT 108 YS2-14d13.q1k chr14 933 1093 1610 1774 F 161 91.93 1399 ambiguous_tel 38 ALIGNMENT 0 YS2-14d13.q1k chr12 932 62 1069739 1069738 C 871 0.00 1399 ambiguous_tel 195 ALIGNMENT 39 YS2-14d13.q1k chr05 1080 932 574915 575066 C 149 77.85 1399 ambiguous_tel 184 ALIGNMENT 0 YS2-14d13.q1k chr04 931 62 1530130 1530129 C 870 0.00 1399 ambiguous_tel 220 ALIGNMENT 0 YS2-14d13.q1k chr16 1005 62 946493 946492 C 944 0.00 1399 ambiguous_tel 47 ALIGNMENT 968 YS2-14d13.q1k chr05 1121 43 575124 576207 C 1079 97.13 1399 ambiguous_tel 6 ALIGNMENT 106 YS2-14d13.q1k chr05 933 1152 1542 1768 F 220 85.45 1399 ambiguous_tel 21 ALIGNMENT 57 YS2-14d13.q1k chr05 969 1144 1470 1651 F 176 80.11 1399 ambiguous_tel 79 ALIGNMENT 70 YS2-14d13.q1k chr13 933 1154 1739 1967 F 222 79.73 1399 ambiguous_tel 54 ALIGNMENT 43 YS2-14d13.q1k chr16 1093 936 946078 946239 C 158 78.48 1399 ambiguous_tel 167 ALIGNMENT 975 YS2-14d13.q1k chr05 43 1154 580 1698 F 1112 96.49 1399 ambiguous_tel 15 ALIGNMENT 0 YS2-14d13.q1k chr14 62 932 1862 1861 F 871 0.00 1399 ambiguous_tel 181 ALIGNMENT 0 YS2-14d13.q1k chr16 968 62 946495 946494 C 907 0.00 1399 ambiguous_tel 86 ALIGNMENT 46 YS2-14d13.q1k chr14 944 1106 1801 1967 F 163 78.53 1399 ambiguous_tel 133 ALIGNMENT 0 YS2-14d13.q1k chr04 931 62 1530238 1530237 C 870 0.00 1399 ambiguous_tel 198 ALIGNMENT 60 YS2-14d13.q1k chr16 1121 969 946337 946494 C 153 82.35 1399 ambiguous_tel 86 ALIGNMENT 46 YS2-14d13.q1k chr16 944 1106 1710 1876 F 163 78.53 1399 ambiguous_tel 134 ALIGNMENT 37 YS2-14d13.q1k chr12 944 1004 2126 2186 F 61 88.52 1399 ambiguous_tel 210 ALIGNMENT 0 YS2-14d13.q1k chr02 62 935 1597 1596 F 874 0.00 1399 ambiguous_tel 73 ALIGNMENT 0 YS2-14d13.q1k chr05 932 62 575030 575029 C 871 0.00 1399 ambiguous_tel 176 ALIGNMENT 0 YS2-14d13.q1k chr09 62 932 1866 1865 F 871 0.00 1399 ambiguous_tel 170 ALIGNMENT 45 YS2-14d13.q1k chr12 1154 969 1076497 1076689 C 186 77.42 1399 ambiguous_tel 94 ALIGNMENT 64 YS2-14d13.q1k chr02 933 1057 2170 2296 F 125 86.40 1399 ambiguous_tel 106 ALIGNMENT 0 YS2-14d13.q1k chr07 932 62 1089323 1089322 C 871 0.00 1399 ambiguous_tel 50 ALIGNMENT 975 YS2-14d13.q1k chr12 43 1154 793 1911 F 1112 96.49 1399 ambiguous_tel 16 ALIGNMENT 46 YS2-14d13.q1k chr13 933 1057 1847 1973 F 125 81.60 1399 ambiguous_tel 149 ALIGNMENT 73 YS2-14d13.q1k chr12 933 1121 1791 1984 F 189 82.01 1399 ambiguous_tel 78 ALIGNMENT 56 YS2-14d13.q1k chr12 1126 936 1069719 1069915 C 191 79.06 1399 ambiguous_tel 100 ALIGNMENT 45 YS2-14d13.q1k chr16 969 1154 1483 1675 F 186 77.42 1399 ambiguous_tel 98 ALIGNMENT 37 YS2-14d13.q1k chr07 1004 944 1088999 1089059 C 61 88.52 1399 ambiguous_tel 209 ALIGNMENT 0 YS2-14d13.q1k chr12 62 932 1791 1790 F 871 0.00 1399 ambiguous_tel 78 ALIGNMENT 51 YS2-14d13.q1k chr08 969 1093 1651 1779 F 125 83.20 1399 ambiguous_tel 121 ALIGNMENT 0 YS2-14d13.q1k chr10 62 932 1741 1740 F 871 0.00 1399 ambiguous_tel 64 ALIGNMENT 0 YS2-14d13.q1k chr02 62 943 2073 2072 F 882 0.00 1399 ambiguous_tel 67 ALIGNMENT 42 YS2-14d13.q1k chr13 933 998 1955 2020 F 66 89.39 1399 ambiguous_tel 180 ALIGNMENT 0 YS2-14d13.q1k chr02 62 943 1677 1676 F 882 0.00 1399 ambiguous_tel 117 ALIGNMENT 961 YS2-14d13.q1k chr09 43 1152 796 1912 F 1110 96.13 1399 ambiguous_tel 17 ALIGNMENT 36 YS2-14d13.q1k chr12 1080 932 1076287 1076438 C 149 77.18 1399 ambiguous_tel 200 ALIGNMENT 45 YS2-14d13.q1k chr04 1154 969 1530296 1530488 C 186 77.42 1399 ambiguous_tel 88 ALIGNMENT 0 YS2-14d13.q1k chr05 968 62 575318 575317 C 907 0.00 1399 ambiguous_tel 89 ALIGNMENT 0 YS2-14d13.q1k chr12 935 62 1076543 1076542 C 874 0.00 1399 ambiguous_tel 174 ALIGNMENT 42 YS2-14d13.q1k chr02 944 1154 1821 2038 F 211 75.83 1399 ambiguous_tel 116 ALIGNMENT 0 YS2-14d13.q1k chr12 943 62 1069692 1069691 C 882 0.00 1399 ambiguous_tel 212 ALIGNMENT 0 YS2-14d13.q1k chr02 62 932 1990 1989 F 871 0.00 1399 ambiguous_tel 159 ALIGNMENT 88 YS2-14d13.q1k chr08 1154 933 560541 560769 C 222 82.43 1399 ambiguous_tel 29 ALIGNMENT 83 YS2-14d13.q1k chr09 1006 1154 1688 1842 F 149 87.92 1399 ambiguous_tel 24 ALIGNMENT 78 YS2-14d13.q1k chr05 933 1118 1578 1768 F 186 83.33 1399 ambiguous_tel 69 ALIGNMENT 32 YS2-14d13.q1k chr06 932 987 1072 1127 F 56 87.50 1399 ambiguous_tel 232 ALIGNMENT 0 YS2-14d13.q1k chr05 935 62 575207 575206 C 874 0.00 1399 ambiguous_tel 109 ALIGNMENT 39 YS2-14d13.q1k chr16 1080 932 945984 946135 C 149 77.85 1399 ambiguous_tel 191 ALIGNMENT 36 YS2-14d13.q1k chr15 1080 932 1089251 1089402 C 149 77.18 1399 ambiguous_tel 201 ALIGNMENT 0 YS2-14d13.q1k chr08 62 932 1759 1758 F 871 0.00 1399 ambiguous_tel 204 ALIGNMENT 0 YS2-14d13.q1k chr14 62 935 1721 1720 F 874 0.00 1399 ambiguous_tel 165 ALIGNMENT 59 YS2-14d13.q1k chr02 944 1067 1677 1803 F 124 84.68 1399 ambiguous_tel 117 ALIGNMENT 0 YS2-14d13.q1k chr13 62 932 1703 1702 F 871 0.00 1399 ambiguous_tel 37 ALIGNMENT 0 YS2-14d13.q1k chr02 62 932 2170 2169 F 871 0.00 1399 ambiguous_tel 106 ALIGNMENT 0 YS2-14d13.q1k chr08 932 62 560662 560661 C 871 0.00 1399 ambiguous_tel 107 ALIGNMENT 47 YS2-14d13.q1k chr02 936 1030 1705 1801 F 95 85.26 1399 ambiguous_tel 154 ALIGNMENT 49 YS2-14d13.q1k chr02 933 1121 1918 2111 F 189 77.78 1399 ambiguous_tel 118 ALIGNMENT 0 YS2-14d13.q1k chr02 62 935 1705 1704 F 874 0.00 1399 ambiguous_tel 154 ALIGNMENT 0 YS2-14d13.q1k chr07 935 62 1089284 1089283 C 874 0.00 1399 ambiguous_tel 110 ALIGNMENT 0 YS2-14d13.q1k chr07 932 62 1089359 1089358 C 871 0.00 1399 ambiguous_tel 33 ALIGNMENT 0 YS2-14d13.q1k chr06 62 968 893 892 F 907 0.00 1399 ambiguous_tel 242 ALIGNMENT 45 YS2-14d13.q1k chr05 1154 969 575125 575317 C 186 77.42 1399 ambiguous_tel 89 ALIGNMENT 0 YS2-14d13.q1k chr12 62 968 7326 7325 F 907 0.00 1399 ambiguous_tel 92 ALIGNMENT 0 YS2-14d13.q1k chr09 62 968 1686 1685 F 907 0.00 1399 ambiguous_tel 22 ALIGNMENT 0 YS2-14d13.q1k chr04 932 62 1530453 1530452 C 871 0.00 1399 ambiguous_tel 31 ALIGNMENT 0 YS2-14d13.q1k chr16 62 932 1555 1554 F 871 0.00 1399 ambiguous_tel 57 ALIGNMENT 39 YS2-14d13.q1k chr12 932 1080 2042 2193 F 149 77.85 1399 ambiguous_tel 186 ALIGNMENT 0 YS2-14d13.q1k chr12 931 62 1076331 1076330 C 870 0.00 1399 ambiguous_tel 226 ALIGNMENT 37 YS2-14d13.q1k chr04 1004 944 1530093 1530153 C 61 88.52 1399 ambiguous_tel 205 ALIGNMENT 0 YS2-14d13.q1k chr05 943 62 574983 574982 C 882 0.00 1399 ambiguous_tel 207 ALIGNMENT 0 YS2-14d13.q1k chr07 932 62 1089107 1089106 C 871 0.00 1399 ambiguous_tel 177 ALIGNMENT 88 YS2-14d13.q1k chr10 933 1105 1705 1881 F 173 86.13 1399 ambiguous_tel 60 ALIGNMENT 67 YS2-14d13.q1k chr02 933 1121 2098 2291 F 189 80.95 1399 ambiguous_tel 80 ALIGNMENT 0 YS2-14d13.q1k chr16 932 62 946459 946458 C 871 0.00 1399 ambiguous_tel 44 ALIGNMENT 0 YS2-14d13.q1k chr13 62 943 1894 1893 F 882 0.00 1399 ambiguous_tel 132 ALIGNMENT 965 YS2-14d13.q1k chr12 43 1121 6436 7519 F 1079 97.03 1399 ambiguous_tel 10 ALIGNMENT 76 YS2-14d13.q1k chr02 936 1121 1597 1787 F 186 82.80 1399 ambiguous_tel 73 ALIGNMENT 0 YS2-14d13.q1k chr10 62 943 2004 2003 F 882 0.00 1399 ambiguous_tel 235 ALIGNMENT 52 YS2-14d13.q1k chr09 933 1030 1830 1929 F 98 86.73 1399 ambiguous_tel 125 ALIGNMENT 0 YS2-14d13.q1k chr16 62 943 1818 1817 F 882 0.00 1399 ambiguous_tel 217 ALIGNMENT 0 YS2-14d13.q1k chr12 62 935 7473 7472 F 874 0.00 1399 ambiguous_tel 163 ALIGNMENT 44 YS2-14d13.q1k chr08 1006 1121 1653 1772 F 116 81.90 1399 ambiguous_tel 120 ALIGNMENT 40 YS2-14d13.q1k chr02 933 1121 1990 2183 F 189 76.19 1399 ambiguous_tel 159 ALIGNMENT 45 YS2-14d13.q1k chr12 969 1154 7326 7518 F 186 77.42 1399 ambiguous_tel 92 ALIGNMENT 0 YS2-14d13.q1k chr05 62 943 1805 1804 F 882 0.00 1399 ambiguous_tel 202 ALIGNMENT 977 YS2-14d13.q1k chr02 43 1153 596 1713 F 1111 96.58 1399 ambiguous_tel 14 ALIGNMENT 0 YS2-14d13.q1k chr14 62 932 1610 1609 F 871 0.00 1399 ambiguous_tel 38 ALIGNMENT 108 YS2-14d13.q1k chr12 1093 933 1069826 1069990 C 161 91.93 1399 ambiguous_tel 35 ALIGNMENT 0 YS2-14d13.q1k chr04 968 62 1530489 1530488 C 907 0.00 1399 ambiguous_tel 88 ALIGNMENT 947 YS2-14d13.q1k chr08 43 1057 761 1777 F 1015 98.23 1399 ambiguous_tel 1 ALIGNMENT 73 YS2-14d13.q1k chr10 933 1121 1777 1970 F 189 82.01 1399 ambiguous_tel 77 ALIGNMENT 76 YS2-14d13.q1k chr16 1121 933 946193 946386 C 189 82.54 1399 ambiguous_tel 72 ALIGNMENT 0 YS2-14d13.q1k chr12 62 932 2079 2078 F 871 0.00 1399 ambiguous_tel 178 ALIGNMENT 33 YS2-14d13.q1k chr04 997 932 1530064 1530129 C 66 84.85 1399 ambiguous_tel 220 ALIGNMENT 0 YS2-14d13.q1k chr16 931 62 946028 946027 C 870 0.00 1399 ambiguous_tel 231 ALIGNMENT 0 YS2-14d13.q1k chr15 943 62 1089427 1089426 C 882 0.00 1399 ambiguous_tel 158 ALIGNMENT 42 YS2-14d13.q1k chr14 933 998 1862 1927 F 66 89.39 1399 ambiguous_tel 181 ALIGNMENT 0 YS2-14d13.q1k chr13 62 943 2002 2001 F 882 0.00 1399 ambiguous_tel 214 ALIGNMENT 0 YS2-14d13.q1k chr14 62 932 1754 1753 F 871 0.00 1399 ambiguous_tel 150 ALIGNMENT 61 YS2-14d13.q1k chr02 933 1154 2026 2254 F 222 78.38 1399 ambiguous_tel 74 ALIGNMENT 0 YS2-14d13.q1k chr15 931 62 1089295 1089294 C 870 0.00 1399 ambiguous_tel 229 ALIGNMENT 0 YS2-14d13.q1k chr16 931 62 946136 946135 C 870 0.00 1399 ambiguous_tel 191 ALIGNMENT 61 YS2-14d13.q1k chr08 1093 936 560533 560694 C 158 82.28 1399 ambiguous_tel 108 ALIGNMENT 0 YS2-14d13.q1k chr12 935 62 1069880 1069879 C 874 0.00 1399 ambiguous_tel 173 ALIGNMENT 33 YS2-14d13.q1k chr07 997 932 1088970 1089035 C 66 84.85 1399 ambiguous_tel 222 ALIGNMENT 0 YS2-14d13.q1k chr12 62 932 1827 1826 F 871 0.00 1399 ambiguous_tel 61 ALIGNMENT 0 YS2-14d13.q1k chr05 932 62 575246 575245 C 871 0.00 1399 ambiguous_tel 49 ALIGNMENT 70 YS2-14d13.q1k chr15 1154 933 1089353 1089581 C 222 79.73 1399 ambiguous_tel 56 ALIGNMENT 61 YS2-14d13.q1k chr16 1121 933 946085 946278 C 189 79.89 1399 ambiguous_tel 84 ALIGNMENT 46 YS2-14d13.q1k chr12 933 1057 1971 2097 F 125 81.60 1399 ambiguous_tel 145 ALIGNMENT 42 YS2-14d13.q1k chr16 933 998 1771 1836 F 66 89.39 1399 ambiguous_tel 182 ALIGNMENT 56 YS2-14d13.q1k chr12 1126 936 1076382 1076578 C 191 79.06 1399 ambiguous_tel 101 ALIGNMENT 54 YS2-14d13.q1k chr08 1030 944 560526 560614 C 87 89.66 1399 ambiguous_tel 123 ALIGNMENT 46 YS2-14d13.q1k chr12 933 1057 7506 7632 F 125 81.60 1399 ambiguous_tel 146 ALIGNMENT 0 YS2-14d13.q1k chr10 62 1005 1671 1670 F 944 0.00 1399 ambiguous_tel 25 ALIGNMENT 0 YS2-14d13.q1k chr05 62 932 1686 1685 F 871 0.00 1399 ambiguous_tel 105 ALIGNMENT 1045 YS2-14d13.p1k chr08 35 1228 248568 249772 F 1194 96.48 1391 accept 0 ALIGNMENT 70 YS2-14d13.q1k chr14 933 1154 1646 1874 F 222 79.73 1399 ambiguous_tel 55 ALIGNMENT 0 YS2-14d13.q1k chr12 932 62 1076402 1076401 C 871 0.00 1399 ambiguous_tel 196 ALIGNMENT 0 YS2-14d13.q1k chr02 62 968 1486 1485 F 907 0.00 1399 ambiguous_tel 137 ALIGNMENT 83 YS2-14d13.q1k chr10 1006 1154 1671 1825 F 149 87.92 1399 ambiguous_tel 25 ALIGNMENT 58 YS2-14d13.q1k chr12 936 1121 1902 2092 F 186 79.57 1399 ambiguous_tel 103 ALIGNMENT 0 YS2-14d13.q1k chr15 943 62 1089319 1089318 C 882 0.00 1399 ambiguous_tel 216 ALIGNMENT 55 YS2-14d13.q1k chr12 936 1121 7437 7627 F 186 79.03 1399 ambiguous_tel 111 ALIGNMENT 55 YS2-14d13.q1k chr16 936 1121 1594 1784 F 186 79.03 1399 ambiguous_tel 114 ALIGNMENT 39 YS2-14d13.q1k chr12 932 1080 7577 7728 F 149 77.85 1399 ambiguous_tel 187 ALIGNMENT 0 YS2-14d13.q1k chr10 62 932 2029 2028 F 871 0.00 1399 ambiguous_tel 236 ALIGNMENT 0 YS2-14d13.q1k chr12 62 932 7614 7613 F 871 0.00 1399 ambiguous_tel 179 ALIGNMENT 0 YS2-14d13.q1k chr08 935 62 560695 560694 C 874 0.00 1399 ambiguous_tel 108 ALIGNMENT 0 YS2-14d13.q1k chr15 935 62 1089543 1089542 C 874 0.00 1399 ambiguous_tel 102 ALIGNMENT 971 YS2-14d13.q1k chr15 1121 43 1089460 1090543 C 1079 97.22 1399 ambiguous_tel 5 ALIGNMENT 31 YS2-14d13.q1k chr02 944 1004 2325 2385 F 61 85.25 1399 ambiguous_tel 237 ALIGNMENT 0 YS2-14d13.q1k chr16 62 932 1771 1770 F 871 0.00 1399 ambiguous_tel 182 ALIGNMENT 64 YS2-14d13.q1k chr02 933 1154 1558 1786 F 222 78.83 1399 ambiguous_tel 66 ALIGNMENT 0 YS2-14d13.q1k chr08 62 968 1651 1650 F 907 0.00 1399 ambiguous_tel 121 ALIGNMENT 42 YS2-14d13.q1k chr12 1091 936 1069720 1069879 C 156 78.21 1399 ambiguous_tel 173 ALIGNMENT 0 YS2-14d13.q1k chr02 62 932 1558 1557 F 871 0.00 1399 ambiguous_tel 66 ALIGNMENT 39 YS2-14d13.q1k chr04 998 933 1530135 1530200 C 66 87.88 1399 ambiguous_tel 193 ALIGNMENT 70 YS2-14d13.q1k chr07 1154 933 1089094 1089322 C 222 79.73 1399 ambiguous_tel 50 ALIGNMENT 0 YS2-14d13.q1k chr12 62 931 7577 7576 F 870 0.00 1399 ambiguous_tel 187 ALIGNMENT 72 YS2-14d13.q1k chr10 928 1104 1880 2060 F 177 82.49 1399 ambiguous_tel 68 ALIGNMENT 0 YS2-14d13.q1k chr12 62 943 1874 1873 F 882 0.00 1399 ambiguous_tel 42 ALIGNMENT 0 YS2-14d13.q1k chr08 932 62 560770 560769 C 871 0.00 1399 ambiguous_tel 29 ALIGNMENT 0 YS2-14d13.q1k chr02 62 931 1845 1844 F 870 0.00 1399 ambiguous_tel 171 ALIGNMENT 0 YS2-14d13.q1k chr12 62 935 1938 1937 F 874 0.00 1399 ambiguous_tel 162 ALIGNMENT 45 YS2-14d13.q1k chr08 1154 969 560649 560841 C 186 77.42 1399 ambiguous_tel 91 ALIGNMENT 33 YS2-14d13.q1k chr10 944 999 2004 2059 F 56 87.50 1399 ambiguous_tel 235 ALIGNMENT 0 YS2-14d13.q1k chr12 62 931 2042 2041 F 870 0.00 1399 ambiguous_tel 186 ALIGNMENT 43 YS2-14d13.q1k chr12 1106 944 1076296 1076462 C 163 77.91 1399 ambiguous_tel 157 ALIGNMENT 45 YS2-14d13.q1k chr06 933 998 1001 1066 F 66 90.91 1399 ambiguous_tel 169 ALIGNMENT 0 YS2-14d13.q1k chr12 968 62 1070027 1070026 C 907 0.00 1399 ambiguous_tel 93 ALIGNMENT 55 YS2-14d13.q1k chr13 936 1121 1778 1968 F 186 79.03 1399 ambiguous_tel 112 ALIGNMENT 987 YS2-14d15.q1k chr10 1147 35 720064 721195 C 1113 97.30 1350 accept 0 ALIGNMENT 1030 YS2-14d15.p1k chr10 33 1243 715493 716724 F 1211 96.20 1318 accept 0 ALIGNMENT 1026 YS2-14d16.p1k chr13 32 1201 298574 299749 F 1170 97.69 1340 accept 0 ALIGNMENT 992 YS2-14d16.q1k chr13 1188 32 300086 301258 C 1157 96.54 1348 accept 0 ALIGNMENT 0 YS2-14d17.q1k vc_4 305 307 1615 1878 F 3 0.00 844 reject_low 6 ALIGNMENT 401 YS2-14d17.q1k vc_4 421 1 5232 5654 C 421 98.57 844 reject_low 2 ALIGNMENT 302 YS2-14d17.q1k vc_3 1 303 2689 2991 F 303 100.00 844 reject_low 5 ALIGNMENT 480 YS2-14d17.q1k vc_7 673 1 1914 2569 C 673 92.57 844 reject_low 1 ALIGNMENT 65 YS2-14d17.q1k vc_4 304 238 6273 6339 C 67 100.00 844 reject_low 9 ALIGNMENT 0 YS2-14d17.q1k vc_7 304 304 4700 4921 C 1 0.00 844 reject_low 7 ALIGNMENT 0 YS2-14d17.q1k vc_4 62 237 1548 1547 F 176 0.00 844 reject_low 6 ALIGNMENT 0 YS2-14d17.q1k vc_4 237 62 6340 6339 C 176 0.00 844 reject_low 9 ALIGNMENT 302 YS2-14d17.q1k vc_2 1 303 2322 2624 F 303 100.00 844 reject_low 4 ALIGNMENT 0 YS2-14d17.q1k vc_7 53 54 5172 6360 C 0 0.00 844 reject_low 7 ALIGNMENT 0 YS2-14d17.q1k vc_4 237 62 113 112 C 176 0.00 844 reject_low 8 ALIGNMENT 65 YS2-14d17.q1k vc_4 238 304 1548 1614 F 67 100.00 844 reject_low 6 ALIGNMENT 302 YS2-14d17.q1k vc_1 1 303 2689 2991 F 303 100.00 844 reject_low 3 ALIGNMENT 247 YS2-14d17.q1k vc_7 303 53 4922 5172 C 251 99.60 844|0,1 reject_low 7 ALIGNMENT 484 YS2-14d17.q1k vc_5 1 743 2556 3279 F 743 90.71 844 reject_vc 0 ALIGNMENT 51 YS2-14d17.q1k vc_7 54 3 6360 6411 C 52 100.00 844|1,0 reject_low 7 ALIGNMENT 102 YS2-14d17.q1k vc_7 421 305 4583 4699 C 117 96.58 844 reject_low 7 ALIGNMENT 170 YS2-14d17.q1k vc_4 308 673 1879 2227 F 366 86.34 844 reject_low 6 ALIGNMENT 65 YS2-14d17.q1k vc_4 304 238 46 112 C 67 100.00 844 reject_low 8 ALIGNMENT 999 YS2-14d18.q1k chr05 1224 31 537681 538906 C 1194 96.23 1333 accept 0 ALIGNMENT 0 YS2-14d18.q1k chr04 172 62 644510 644509 C 111 0.00 1333 reject_low 1 ALIGNMENT 109 YS2-14d18.q1k chr04 499 173 644183 644509 C 327 78.59 1333 reject_low 1 ALIGNMENT 0 YS2-14d18.q1k chr04 883 500 644184 644183 C 384 0.00 1333 reject_low 1 ALIGNMENT 1081 YS2-14d18.p1k chr05 39 1276 533894 535144 F 1238 96.61 1309 accept 0 ALIGNMENT 377 YS2-14d19.p1k chr02 796 87 777900 778603 C 710 86.06 1447 accept 0 ALIGNMENT 1022 YS2-14d20.q1k chr12 31 1248 398172 399395 F 1218 95.73 1341 accept 0 ALIGNMENT 1076 YS2-14d20.p1k chr12 1260 38 403065 404293 C 1223 96.65 1306 accept 0 ALIGNMENT 0 YS2-14d21.q1k vc_7 304 304 4700 4921 C 1 0.00 670 reject_low 8 ALIGNMENT 0 YS2-14d21.q1k vc_4 237 62 6340 6339 C 176 0.00 670 reject_low 10 ALIGNMENT 0 YS2-14d21.p1k chr16 416 432 263198 263197 F 17 0.00 432 accept 0 ALIGNMENT 0 YS2-14d21.q1k vc_4 62 237 1548 1547 F 176 0.00 670 reject_vc 4 ALIGNMENT 0 YS2-14d21.q1k vc_7 53 54 5172 6360 C 0 0.00 670 reject_low 8 ALIGNMENT 194 YS2-14d21.q1k vc_4 308 669 1879 2251 F 362 86.46 670 reject_vc 4 ALIGNMENT 502 YS2-14d21.q1k vc_7 669 1 1890 2569 C 669 92.53 670 reject_vc 2 ALIGNMENT 0 YS2-14d21.q1k vc_4 237 62 113 112 C 176 0.00 670 reject_low 9 ALIGNMENT 301 YS2-14d21.q1k vc_1 1 303 2689 2991 F 303 99.67 670 reject_vc 5 ALIGNMENT 301 YS2-14d21.q1k vc_3 1 303 2689 2991 F 303 99.67 670 reject_vc 7 ALIGNMENT 64 YS2-14d21.q1k vc_4 304 238 6273 6339 C 67 98.51 670 reject_low 10 ALIGNMENT 100 YS2-14d21.q1k vc_7 421 305 4583 4699 C 117 96.58 670 reject_low 8 ALIGNMENT 0 YS2-14d21.q1k vc_4 305 307 1615 1878 F 3 0.00 670 reject_vc 4 ALIGNMENT 502 YS2-14d21.q1k vc_5 1 669 2556 3235 F 669 92.53 670 reject_vc 1 ALIGNMENT 64 YS2-14d21.q1k vc_4 238 304 1548 1614 F 67 98.51 670 reject_vc 4 ALIGNMENT 51 YS2-14d21.q1k vc_7 54 3 6360 6411 C 52 100.00 670|1,0 reject_low 8 ALIGNMENT 397 YS2-14d21.q1k vc_4 421 1 5232 5654 C 421 98.34 670 reject_vc 3 ALIGNMENT 371 YS2-14d21.p1k chr16 33 415 262816 263198 F 383 99.48 432 accept 0 ALIGNMENT 301 YS2-14d21.q1k vc_2 1 303 2322 2624 F 303 99.67 670 reject_vc 6 ALIGNMENT 246 YS2-14d21.q1k vc_7 303 53 4922 5172 C 251 99.20 670|0,1 reject_low 8 ALIGNMENT 64 YS2-14d21.q1k vc_4 304 238 46 112 C 67 98.51 670 reject_low 9 ALIGNMENT 1011 YS2-14d22.p1k chr04 31 1180 1231155 1232320 F 1150 97.30 1268 accept 0 ALIGNMENT 961 YS2-14d22.q1k chr04 1209 40 1234327 1235483 C 1170 95.81 1312 accept 0 ALIGNMENT 943 YS2-14d23.q1k chr15 39 1156 265607 266706 F 1118 96.60 1307 accept 0 ALIGNMENT 874 YS2-14d23.p1k chr15 1004 30 269103 270084 C 975 97.54 1292 accept 0 ALIGNMENT 867 YS2-14d24.p1k chr15 990 28 269132 270084 C 963 98.23 1432 accept 0 ALIGNMENT 996 YS2-14d24.q1k chr15 34 1228 265610 266810 F 1195 95.56 1254 accept 0 ALIGNMENT 946 YS2-14e01.q1k chr04 30 1193 964871 966028 F 1164 95.70 1374 accept 0 ALIGNMENT 985 YS2-14e01.p1k chr04 1194 31 969638 970815 C 1164 96.39 1300 accept 0 ALIGNMENT 0 YS2-14e02.p1k chr03 339 354 101563 101562 F 16 0.00 354 accept 0 ALIGNMENT 274 YS2-14e02.p1k chr03 40 338 101265 101563 F 299 97.99 354 accept 0 ALIGNMENT 389 YS2-14e03.p1k vc_7 1 600 456 1057 F 600 89.33 694 reject_vc 5 ALIGNMENT 0 YS2-14e03.q1k vc_4 92 215 5831 5830 F 124 0.00 256 reject_vc 9 ALIGNMENT 396 YS2-14e03.p1k vc_1 604 1 1143 1749 C 604 89.57 694 reject_vc 1 ALIGNMENT 0 YS2-14e03.q1k vc_3 215 92 2513 2512 C 124 0.00 256 reject_vc 8 ALIGNMENT 0 YS2-14e03.q1k vc_5 217 92 37 36 C 126 0.00 256 reject_vc 12 ALIGNMENT 41 YS2-14e03.q1k vc_1 256 216 2472 2512 C 41 100.00 256 reject_vc 7 ALIGNMENT 39 YS2-14e03.q1k vc_5 256 218 5025 5063 C 39 100.00 256 reject_vc 10 ALIGNMENT 38 YS2-14e03.q1k vc_7 219 256 13525 13562 F 38 100.00 256 reject_vc 11 ALIGNMENT 0 YS2-14e03.q1k vc_7 92 218 13525 13524 F 127 0.00 256 reject_vc 11 ALIGNMENT 41 YS2-14e03.q1k vc_4 216 256 5831 5871 F 41 100.00 256 reject_vc 9 ALIGNMENT 389 YS2-14e03.p1k vc_7 1 600 13918 14519 F 600 89.33 694 reject_vc 6 ALIGNMENT 36 YS2-14e03.q1k vc_5 253 218 1 36 C 36 100.00 256 reject_vc 12 ALIGNMENT 396 YS2-14e03.p1k vc_3 604 1 1143 1749 C 604 89.57 694 reject_vc 3 ALIGNMENT 0 YS2-14e03.q1k vc_1 215 92 2513 2512 C 124 0.00 256 reject_vc 7 ALIGNMENT 41 YS2-14e03.q1k vc_3 256 216 2472 2512 C 41 100.00 256 reject_vc 8 ALIGNMENT 396 YS2-14e03.p1k vc_2 604 1 1143 1749 C 604 89.57 694 reject_vc 2 ALIGNMENT 399 YS2-14e03.p1k vc_5 604 1 4063 4669 C 604 89.74 694 reject_vc 0 ALIGNMENT 398 YS2-14e03.p1k vc_6 1 600 3712 4313 F 600 89.83 694 reject_vc 4 ALIGNMENT 0 YS2-14e03.q1k vc_5 217 92 5064 5063 C 126 0.00 256 reject_vc 10 ALIGNMENT 1011 YS2-14e04.p1k chr10 1208 31 305032 306222 C 1178 96.43 1321 accept 0 ALIGNMENT 1035 YS2-14e04.q1k chr10 41 1232 302399 303599 F 1192 96.31 1398 accept 0 ALIGNMENT 55 YS2-14e05.q1k vc_4 303 238 46 112 C 66 95.45 795 reject_low 14 ALIGNMENT 55 YS2-14e05.q1k vc_4 303 238 6273 6339 C 66 95.45 795 reject_low 13 ALIGNMENT 186 YS2-14e05.p1k vc_2 355 1 1514 1875 C 355 85.07 655 reject_low 3 ALIGNMENT 0 YS2-14e05.q1k vc_4 237 62 6340 6339 C 176 0.00 795 reject_low 13 ALIGNMENT 0 YS2-14e05.q1k vc_4 237 62 113 112 C 176 0.00 795 reject_low 14 ALIGNMENT 186 YS2-14e05.p1k vc_1 355 1 1514 1875 C 355 85.07 655 reject_low 2 ALIGNMENT 290 YS2-14e05.q1k vc_2 1 302 2322 2624 F 302 99.01 795 reject_low 9 ALIGNMENT 290 YS2-14e05.q1k vc_3 1 302 2689 2991 F 302 99.01 795 reject_low 10 ALIGNMENT 186 YS2-14e05.p1k vc_3 355 1 1514 1875 C 355 85.07 655 reject_low 4 ALIGNMENT 186 YS2-14e05.p1k vc_7 1 355 13792 14153 F 355 85.07 655 reject_low 5 ALIGNMENT 51 YS2-14e05.q1k vc_7 54 3 6360 6411 C 52 100.00 795|1,0 reject_low 11 ALIGNMENT 186 YS2-14e05.p1k vc_7 1 355 330 691 F 355 85.07 655 reject_vc 1 ALIGNMENT 440 YS2-14e05.q1k vc_7 632 1 1937 2569 C 632 91.14 795 reject_vc 1 ALIGNMENT 181 YS2-14e05.p1k vc_6 1 285 3586 3874 F 285 88.77 655 reject_low 7 ALIGNMENT 236 YS2-14e05.q1k vc_7 302 53 4922 5172 C 250 98.40 795|0,1 reject_low 11 ALIGNMENT 440 YS2-14e05.q1k vc_5 1 632 2556 3188 F 632 91.14 795 reject_vc 0 ALIGNMENT 117 YS2-14e05.p1k vc_4 1 126 6101 6226 F 126 97.62 655 reject_low 13 ALIGNMENT 90 YS2-14e05.q1k vc_7 416 304 4589 4699 C 113 94.69 795 reject_low 11 ALIGNMENT 290 YS2-14e05.q1k vc_1 1 302 2689 2991 F 302 99.01 795 reject_low 8 ALIGNMENT 0 YS2-14e05.q1k vc_4 304 306 1615 1878 F 3 0.00 795 reject_low 12 ALIGNMENT 186 YS2-14e05.p1k vc_5 355 1 4434 4795 C 355 85.07 655 reject_vc 0 ALIGNMENT 0 YS2-14e05.q1k vc_4 62 237 1548 1547 F 176 0.00 795 reject_low 12 ALIGNMENT 55 YS2-14e05.q1k vc_4 238 303 1548 1614 F 66 95.45 795 reject_low 12 ALIGNMENT 0 YS2-14e05.q1k vc_7 53 54 5172 6360 C 0 0.00 795 reject_low 11 ALIGNMENT 0 YS2-14e05.q1k vc_7 303 303 4700 4921 C 1 0.00 795 reject_low 11 ALIGNMENT 142 YS2-14e05.q1k vc_4 307 632 1879 2204 F 326 83.74 795 reject_low 12 ALIGNMENT 376 YS2-14e05.q1k vc_4 416 1 5238 5654 C 416 97.36 795 reject_low 6 ALIGNMENT 990 YS2-14e07.q1k chr10 1193 58 175961 177111 C 1136 97.01 1396 accept 0 ALIGNMENT 956 YS2-14e07.p1k chr10 31 1301 172794 174063 F 1271 93.63 1305 accept 0 ALIGNMENT 666 YS2-14e08.p1k chr02 32 846 4763 5551 F 815 95.83 1341 ambiguous_tel 14 ALIGNMENT 0 YS2-14e08.p1k chr05 847 961 6226 6225 F 115 0.00 1341 ambiguous_tel 17 ALIGNMENT 157 YS2-14e08.p1k chr08 877 1246 5087 5468 F 370 85.14 1341 ambiguous_tel 18 ALIGNMENT 167 YS2-14e08.p1k chr02 866 1247 6178 6573 F 382 85.34 1341 ambiguous_tel 14 ALIGNMENT 0 YS2-14e08.p1k chr08 845 846 556548 557281 C 0 0.00 1341 ambiguous_tel 13 ALIGNMENT 0 YS2-14e08.p1k chr07 870 847 1084057 1084645 C 24 0.00 1341 ambiguous_tel 7 ALIGNMENT 147 YS2-14e08.p1k chr07 1246 871 1083677 1084056 C 376 83.78 1341 ambiguous_tel 7 ALIGNMENT 158 YS2-14e08.p1k chr14 877 1246 7012 7392 F 370 85.14 1341 ambiguous_tel 5 ALIGNMENT 0 YS2-14e08.p1k chr12 865 847 1064706 1065439 C 19 0.00 1341 ambiguous_tel 19 ALIGNMENT 172 YS2-14e08.p1k chr05 1246 871 569630 570013 C 376 86.17 1341 ambiguous_tel 15 ALIGNMENT 219 YS2-14e08.p1k chr02 1246 845 812409 812815 C 402 88.81 1341 ambiguous_tel 20 ALIGNMENT 0 YS2-14e08.p1k chr14 847 876 6323 7011 F 30 0.00 1341 ambiguous_tel 5 ALIGNMENT 732 YS2-14e08.p1k chr12 32 846 4562 5366 F 815 97.91 1341 ambiguous_tel 10 ALIGNMENT 219 YS2-14e08.p1k chr13 845 1246 5902 6308 F 402 88.56 1341|1,0 ambiguous_tel 2 ALIGNMENT 0 YS2-14e08.p1k chr15 902 847 1084302 1084909 C 56 0.00 1341 ambiguous_tel 12 ALIGNMENT 0 YS2-14e08.p1k chr10 847 870 6695 7346 F 24 0.00 1341 ambiguous_tel 4 ALIGNMENT 650 YS2-14e08.p1k chr06 32 846 3600 4389 F 815 95.21 1341 ambiguous_tel 16 ALIGNMENT 731 YS2-14e08.p1k chr04 846 32 1525745 1526550 C 815 97.79 1341 ambiguous_tel 6 ALIGNMENT 150 YS2-14e08.p1k chr12 877 1247 11674 12050 F 371 84.37 1341 ambiguous_tel 10,11 ALIGNMENT 158 YS2-14e08.p1k chr10 871 1246 7347 7731 F 376 84.84 1341 ambiguous_tel 4 ALIGNMENT 0 YS2-14e08.p1k chr06 847 887 4390 5127 F 41 0.00 1341 ambiguous_tel 16 ALIGNMENT 536 YS2-14e08.p1k chr05 32 846 5467 6226 F 815 91.90 1341 ambiguous_tel 17 ALIGNMENT 745 YS2-14e08.p1k chr16 32 846 5421 6231 F 815 98.16 1341 ambiguous_tel 8 ALIGNMENT 731 YS2-14e08.p1k chr12 846 32 1071946 1072751 C 815 97.79 1341 ambiguous_tel 9 ALIGNMENT 732 YS2-14e08.p1k chr12 32 846 10097 10901 F 815 97.91 1341 ambiguous_tel 11 ALIGNMENT 0 YS2-14e08.p1k chr02 844 62 812816 812815 C 783 0.00 1341 ambiguous_tel 20 ALIGNMENT 0 YS2-14e08.p1k chr13 846 845 5242 5902 F 0 0.00 1341 ambiguous_tel 2 ALIGNMENT 732 YS2-14e08.p1k chr13 32 846 4438 5242 F 815 97.91 1341|0,1 ambiguous_tel 2 ALIGNMENT 0 YS2-14e08.p1k chr05 870 847 570014 570609 C 24 0.00 1341 ambiguous_tel 15 ALIGNMENT 0 YS2-14e08.p1k chr12 865 847 1064706 1071945 C 19 0.00 1341 ambiguous_tel 9 ALIGNMENT 731 YS2-14e08.p1k chr15 846 32 1084910 1085715 C 815 97.79 1341 ambiguous_tel 12 ALIGNMENT 0 YS2-14e08.p1k chr16 847 902 6232 6839 F 56 0.00 1341 ambiguous_tel 8 ALIGNMENT 745 YS2-14e08.p1k chr07 846 32 1084646 1085456 C 815 98.16 1341 ambiguous_tel 7 ALIGNMENT 660 YS2-14e08.p1k chr08 846 32 557281 558068 C 815 95.71 1341|1,0 ambiguous_tel 13 ALIGNMENT 527 YS2-14e08.p1k chr12 846 32 1065440 1066199 C 815 91.53 1341 ambiguous_tel 19 ALIGNMENT 140 YS2-14e08.p1k chr06 888 1246 5128 5494 F 359 83.84 1341 ambiguous_tel 16 ALIGNMENT 150 YS2-14e08.p1k chr12 1246 866 1064314 1064705 C 381 83.73 1341 ambiguous_tel 9,19 ALIGNMENT 1015 YS2-14e08.q1k chr07 1183 34 2854 4017 C 1150 97.57 1390 accept 0 ALIGNMENT 0 YS2-14e08.p1k chr08 699 876 4952 5086 F 178 0.00 1341 ambiguous_tel 18 ALIGNMENT 649 YS2-14e08.p1k chr05 846 32 570610 571396 C 815 95.34 1341 ambiguous_tel 15 ALIGNMENT 147 YS2-14e08.p1k chr16 903 1246 6840 7187 F 344 84.88 1341 ambiguous_tel 8 ALIGNMENT 0 YS2-14e08.p1k chr02 847 865 5552 6177 F 19 0.00 1341 ambiguous_tel 14 ALIGNMENT 0 YS2-14e08.p1k chr09 847 870 6712 7363 F 24 0.00 1341 ambiguous_tel 3 ALIGNMENT 158 YS2-14e08.p1k chr09 871 1246 7364 7748 F 376 84.84 1341 ambiguous_tel 3 ALIGNMENT 157 YS2-14e08.p1k chr08 1252 845 556136 556548 C 408 84.07 1341|0,1 ambiguous_tel 13 ALIGNMENT 745 YS2-14e08.p1k chr09 32 846 5901 6711 F 815 98.16 1341 ambiguous_tel 3 ALIGNMENT 745 YS2-14e08.p1k chr10 32 846 5884 6694 F 815 98.16 1341 ambiguous_tel 4 ALIGNMENT 0 YS2-14e08.p1k chr12 847 876 5367 11673 F 30 0.00 1341 ambiguous_tel 10 ALIGNMENT 167 YS2-14e08.p1k chr04 1246 871 1524644 1525030 C 376 85.37 1341 ambiguous_tel 6 ALIGNMENT 0 YS2-14e08.p1k chr12 847 876 10902 11673 F 30 0.00 1341 ambiguous_tel 11 ALIGNMENT 0 YS2-14e08.p1k chr04 870 847 1525031 1525744 C 24 0.00 1341 ambiguous_tel 6 ALIGNMENT 586 YS2-14e08.p1k chr08 32 698 4294 4951 F 667 97.30 1341 ambiguous_tel 18 ALIGNMENT 745 YS2-14e08.p1k chr14 32 846 5512 6322 F 815 98.16 1341 ambiguous_tel 5 ALIGNMENT 144 YS2-14e08.p1k chr15 1246 903 1083954 1084301 C 344 84.30 1341 ambiguous_tel 12 ALIGNMENT 940 YS2-14e08.p1k chr16 1117 32 942538 943614 C 1086 96.78 1341 ambiguous_tel 1 ALIGNMENT 950 YS2-14e09.q1k chr02 37 1195 743026 744184 F 1159 94.82 1398 accept 0 ALIGNMENT 849 YS2-14e09.p1k chr02 1114 33 743864 744946 C 1082 94.18 1373 accept 0 ALIGNMENT 1027 YS2-14e10.p1k chr07 36 1223 827330 828535 F 1188 96.63 1413 accept_chi 0 ALIGNMENT 953 YS2-14e10.q1k chr04 1094 44 963540 964603 C 1051 98.00 1370 accept_chi 1 ALIGNMENT 791 YS2-14e11.p1k chr05 31 1010 467530 468501 F 980 94.80 1182 accept 0 ALIGNMENT 970 YS2-14e11.q1k chr05 1207 40 468169 469354 C 1168 95.72 1362 accept 0 ALIGNMENT 39 YS2-14e12.q1k vc_5 301 263 5025 5063 C 39 100.00 301 reject_low 6 ALIGNMENT 41 YS2-14e12.q1k vc_1 301 261 2472 2512 C 41 100.00 301 reject_low 2 ALIGNMENT 0 YS2-14e12.q1k vc_2 260 62 2146 2145 C 199 0.00 301 reject_low 3 ALIGNMENT 41 YS2-14e12.q1k vc_3 301 261 2472 2512 C 41 100.00 301 reject_low 4 ALIGNMENT 0 YS2-14e12.q1k vc_3 260 62 2513 2512 C 199 0.00 301 reject_low 4 ALIGNMENT 41 YS2-14e12.q1k vc_2 301 261 2105 2145 C 41 100.00 301 reject_low 3 ALIGNMENT 192 YS2-14e12.p1k chr04 36 249 1059701 1059915 F 214 99.07 267 accept_chi 1 ALIGNMENT 0 YS2-14e12.q1k vc_7 62 263 13525 13524 F 202 0.00 301 reject_low 7 ALIGNMENT 0 YS2-14e12.q1k vc_5 262 62 37 36 C 201 0.00 301 reject_low 8 ALIGNMENT 0 YS2-14e12.q1k vc_4 62 260 5831 5830 F 199 0.00 301 reject_low 5 ALIGNMENT 36 YS2-14e12.q1k vc_5 298 263 1 36 C 36 100.00 301 reject_low 8 ALIGNMENT 0 YS2-14e12.q1k chr04 301 261 1059695 1059694 C 41 0.00 301 accept_chi 0 ALIGNMENT 0 YS2-14e12.q1k vc_5 262 62 5064 5063 C 201 0.00 301 reject_low 6 ALIGNMENT 38 YS2-14e12.q1k vc_7 264 301 13525 13562 F 38 100.00 301 reject_low 7 ALIGNMENT 0 YS2-14e12.q1k vc_1 260 62 2513 2512 C 199 0.00 301 reject_low 2 ALIGNMENT 41 YS2-14e12.q1k vc_4 261 301 5831 5871 F 41 100.00 301 reject_low 5 ALIGNMENT 0 YS2-14e12.p1k chr04 250 267 1059915 1059914 F 18 0.00 267 accept_chi 1 ALIGNMENT 200 YS2-14e12.q1k chr04 260 40 1059694 1059915 C 221 99.55 301 accept_chi 0 ALIGNMENT 0 YS2-14e13.p1k chr05 786 630 3199 3198 C 157 0.00 1183 reject_low 2 ALIGNMENT 242 YS2-14e13.p1k chr05 375 629 573503 573757 F 255 98.43 1183 reject_low 12 ALIGNMENT 0 YS2-14e13.p1k chr13 374 62 3482 3481 C 313 0.00 1183 reject_low 17 ALIGNMENT 0 YS2-14e13.p1k chr02 374 62 3807 3806 C 313 0.00 1183 reject_low 5 ALIGNMENT 242 YS2-14e13.p1k chr14 629 375 3134 3388 C 255 98.43 1183 reject_low 18 ALIGNMENT 0 YS2-14e13.p1k chr10 374 62 3760 3759 C 313 0.00 1183 reject_low 4 ALIGNMENT 0 YS2-14e13.p1k chr12 786 630 3352 3351 C 157 0.00 1183 reject_low 8 ALIGNMENT 242 YS2-14e13.p1k chr12 375 629 1068212 1068466 F 255 98.43 1183 reject_low 15 ALIGNMENT 242 YS2-14e13.p1k chr15 375 629 1087839 1088093 F 255 98.43 1183 reject_low 19 ALIGNMENT 0 YS2-14e13.p1k chr10 786 630 3506 3505 C 157 0.00 1183 reject_low 4 ALIGNMENT 0 YS2-14e13.p1k chr16 786 630 3044 3043 C 157 0.00 1183 reject_low 20 ALIGNMENT 242 YS2-14e13.p1k chr12 375 629 1074875 1075129 F 255 98.43 1183 reject_low 16 ALIGNMENT 1035 YS2-14e13.q1k chr12 1275 30 683971 685224 C 1246 95.67 1374 accept 0 ALIGNMENT 314 YS2-14e13.p1k chr14 381 35 331449 331795 C 347 97.69 1183 reject_low 1 ALIGNMENT 0 YS2-14e13.p1k chr12 62 628 683899 683898 F 567 0.00 1183 accept 0 ALIGNMENT 0 YS2-14e13.p1k chr07 630 786 1087834 1087833 F 157 0.00 1183 reject_low 13 ALIGNMENT 0 YS2-14e13.p1k chr16 630 786 944826 944825 F 157 0.00 1183 reject_low 10 ALIGNMENT 0 YS2-14e13.p1k chr12 630 786 1068466 1068465 F 157 0.00 1183 reject_low 15 ALIGNMENT 245 YS2-14e13.p1k chr16 375 629 944572 944826 F 255 98.82 1183 reject_low 10 ALIGNMENT 0 YS2-14e13.p1k chr14 374 62 3389 3388 C 313 0.00 1183 reject_low 18 ALIGNMENT 242 YS2-14e13.p1k chr16 629 375 3043 3297 C 255 98.43 1183 reject_low 20 ALIGNMENT 0 YS2-14e13.p1k chr04 630 786 1528928 1528927 F 157 0.00 1183 reject_low 11 ALIGNMENT 0 YS2-14e13.p1k chr06 786 630 2389 2388 C 157 0.00 1183 reject_low 3 ALIGNMENT 245 YS2-14e13.p1k chr12 629 375 3351 3605 C 255 98.82 1183 reject_low 8 ALIGNMENT 242 YS2-14e13.p1k chr07 375 629 1087580 1087834 F 255 98.43 1183 reject_low 13 ALIGNMENT 0 YS2-14e13.p1k chr12 62 374 1074875 1074874 F 313 0.00 1183 reject_low 16 ALIGNMENT 0 YS2-14e13.p1k chr08 374 62 3338 3337 C 313 0.00 1183 reject_low 14 ALIGNMENT 0 YS2-14e13.p1k chr08 62 374 559025 559024 F 313 0.00 1183 reject_low 6 ALIGNMENT 0 YS2-14e13.p1k chr16 62 374 944572 944571 F 313 0.00 1183 reject_low 10 ALIGNMENT 242 YS2-14e13.p1k chr08 629 375 3083 3337 C 255 98.43 1183 reject_low 14 ALIGNMENT 248 YS2-14e13.p1k chr10 629 375 3505 3759 C 255 99.22 1183 reject_low 4 ALIGNMENT 0 YS2-14e13.p1k chr02 786 630 3553 3552 C 157 0.00 1183 reject_low 5 ALIGNMENT 0 YS2-14e13.p1k chr05 630 786 573757 573756 F 157 0.00 1183 reject_low 12 ALIGNMENT 0 YS2-14e13.p1k chr07 62 374 1087580 1087579 F 313 0.00 1183 reject_low 13 ALIGNMENT 0 YS2-14e13.p1k chr12 62 374 1068212 1068211 F 313 0.00 1183 reject_low 15 ALIGNMENT 0 YS2-14e13.p1k chr15 62 374 1087839 1087838 F 313 0.00 1183 reject_low 19 ALIGNMENT 0 YS2-14e13.p1k chr14 786 382 331450 331449 C 405 0.00 1183 reject_low 1 ALIGNMENT 0 YS2-14e13.p1k chr13 786 630 3228 3227 C 157 0.00 1183 reject_low 17 ALIGNMENT 0 YS2-14e13.p1k chr12 374 62 9141 9140 C 313 0.00 1183 reject_low 9 ALIGNMENT 242 YS2-14e13.p1k chr04 375 629 1528674 1528928 F 255 98.43 1183 reject_low 11 ALIGNMENT 0 YS2-14e13.p1k chr14 786 630 3135 3134 C 157 0.00 1183 reject_low 18 ALIGNMENT 251 YS2-14e13.p1k chr06 629 375 2388 2642 C 255 99.61 1183 reject_low 3 ALIGNMENT 0 YS2-14e13.p1k chr04 62 374 1528674 1528673 F 313 0.00 1183 reject_low 11 ALIGNMENT 0 YS2-14e13.p1k chr12 786 630 8887 8886 C 157 0.00 1183 reject_low 9 ALIGNMENT 0 YS2-14e13.p1k chr12 374 62 3606 3605 C 313 0.00 1183 reject_low 8 ALIGNMENT 0 YS2-14e13.p1k chr16 374 62 3298 3297 C 313 0.00 1183 reject_low 20 ALIGNMENT 0 YS2-14e13.p1k chr06 374 62 2643 2642 C 313 0.00 1183 reject_low 3 ALIGNMENT 245 YS2-14e13.p1k chr09 629 375 3522 3776 C 255 98.82 1183 reject_low 7 ALIGNMENT 0 YS2-14e13.p1k chr05 62 374 573503 573502 F 313 0.00 1183 reject_low 12 ALIGNMENT 0 YS2-14e13.p1k chr08 630 786 559279 559278 F 157 0.00 1183 reject_low 6 ALIGNMENT 251 YS2-14e13.p1k chr05 629 375 3198 3452 C 255 99.61 1183 reject_low 2 ALIGNMENT 0 YS2-14e13.p1k chr09 374 62 3777 3776 C 313 0.00 1183 reject_low 7 ALIGNMENT 315 YS2-14e13.p1k chr12 629 1054 683899 684314 F 426 94.13 1183 accept 0 ALIGNMENT 0 YS2-14e13.p1k chr08 786 630 3084 3083 C 157 0.00 1183 reject_low 14 ALIGNMENT 0 YS2-14e13.p1k chr12 630 786 1075129 1075128 F 157 0.00 1183 reject_low 16 ALIGNMENT 0 YS2-14e13.p1k chr15 630 786 1088093 1088092 F 157 0.00 1183 reject_low 19 ALIGNMENT 245 YS2-14e13.p1k chr12 629 375 8886 9140 C 255 98.82 1183 reject_low 9 ALIGNMENT 245 YS2-14e13.p1k chr02 629 375 3552 3806 C 255 98.82 1183 reject_low 5 ALIGNMENT 0 YS2-14e13.p1k chr05 374 62 3453 3452 C 313 0.00 1183 reject_low 2 ALIGNMENT 242 YS2-14e13.p1k chr13 629 375 3227 3481 C 255 98.43 1183 reject_low 17 ALIGNMENT 245 YS2-14e13.p1k chr08 375 629 559025 559279 F 255 98.82 1183 reject_low 6 ALIGNMENT 0 YS2-14e13.p1k chr09 786 630 3523 3522 C 157 0.00 1183 reject_low 7 ALIGNMENT 1060 YS2-14e14.p1k chr15 32 1179 380107 381255 F 1148 98.43 1183 accept 0 ALIGNMENT 990 YS2-14e14.q1k chr15 1181 39 383128 384281 C 1143 96.68 1395 accept 0 ALIGNMENT 0 YS2-14e15.q1k vc_5 237 99 37 36 C 139 0.00 276 reject_low 14 ALIGNMENT 358 YS2-14e15.p1k vc_2 612 1 1143 1749 C 612 87.75 776 reject_vc 4 ALIGNMENT 346 YS2-14e15.p1k vc_6 1 554 3712 4257 F 554 89.89 776 reject_vc 8 ALIGNMENT 358 YS2-14e15.p1k vc_1 612 1 1143 1749 C 612 87.75 776 reject_vc 3 ALIGNMENT 0 YS2-14e15.q1k vc_1 235 99 2513 2512 C 137 0.00 276 reject_low 9 ALIGNMENT 0 YS2-14e15.q1k vc_5 237 99 5064 5063 C 139 0.00 276 reject_low 12 ALIGNMENT 0 YS2-14e15.q1k vc_4 99 235 5831 5830 F 137 0.00 276 reject_low 11 ALIGNMENT 0 YS2-14e15.q1k chr12 237 276 465197 465196 F 40 0.00 276 accept 1 ALIGNMENT 0 YS2-14e15.q1k chr12 237 276 456060 456059 F 40 0.00 276 accept 0 ALIGNMENT 41 YS2-14e15.q1k vc_3 276 236 2472 2512 C 41 100.00 276 reject_low 10 ALIGNMENT 358 YS2-14e15.p1k vc_3 612 1 1143 1749 C 612 87.75 776 reject_vc 5 ALIGNMENT 159 YS2-14e15.q1k chr12 37 236 465005 465197 F 200 95.50 276 accept 1 ALIGNMENT 36 YS2-14e15.q1k vc_5 273 238 1 36 C 36 100.00 276 reject_low 14 ALIGNMENT 41 YS2-14e15.q1k vc_4 236 276 5831 5871 F 41 100.00 276 reject_low 11 ALIGNMENT 159 YS2-14e15.q1k chr12 37 236 455868 456060 F 200 95.50 276 accept 0 ALIGNMENT 39 YS2-14e15.q1k vc_5 276 238 5025 5063 C 39 100.00 276 reject_low 12 ALIGNMENT 351 YS2-14e15.p1k vc_7 1 612 13918 14524 F 612 88.24 776 reject_vc 7 ALIGNMENT 361 YS2-14e15.p1k vc_5 612 1 4063 4669 C 612 87.91 776 reject_vc 2 ALIGNMENT 38 YS2-14e15.q1k vc_7 239 276 13525 13562 F 38 100.00 276 reject_low 13 ALIGNMENT 41 YS2-14e15.q1k vc_1 276 236 2472 2512 C 41 100.00 276 reject_low 9 ALIGNMENT 0 YS2-14e15.q1k vc_3 235 99 2513 2512 C 137 0.00 276 reject_low 10 ALIGNMENT 0 YS2-14e15.q1k vc_7 99 238 13525 13524 F 140 0.00 276 reject_low 13 ALIGNMENT 351 YS2-14e15.p1k vc_7 1 612 456 1062 F 612 88.24 776 reject_vc 6 ALIGNMENT 971 YS2-14e16.q1k chr14 49 1114 210491 211567 F 1066 98.22 1381 accept 0 ALIGNMENT 825 YS2-14e16.p1k chr14 959 38 213639 214573 C 922 98.05 1310 accept 0 ALIGNMENT 0 YS2-14e17.q1k vc_2 882 92 2146 2145 C 791 0.00 1330 reject_low 13 ALIGNMENT 0 YS2-14e17.q1k vc_4 922 92 1535 1534 C 831 0.00 1330 reject_low 11 ALIGNMENT 0 YS2-14e17.q1k vc_2 92 922 2164 2163 F 831 0.00 1330 reject_low 4 ALIGNMENT 0 YS2-14e17.q1k vc_4 92 882 5831 5830 F 791 0.00 1330 reject_low 10 ALIGNMENT 0 YS2-14e17.q1k vc_1 92 922 2531 2530 F 831 0.00 1330 reject_low 3 ALIGNMENT 88 YS2-14e17.q1k vc_3 923 1116 2531 2732 F 194 84.02 1330 reject_low 5 ALIGNMENT 777 YS2-14e17.p1k chr04 889 34 391375 392235 C 856 97.43 1383 accept_chi 1 ALIGNMENT 0 YS2-14e17.q1k vc_7 92 885 13525 13524 F 794 0.00 1330 reject_low 17 ALIGNMENT 41 YS2-14e17.q1k vc_2 923 883 2105 2145 C 41 100.00 1330 reject_low 13 ALIGNMENT 0 YS2-14e17.q1k vc_3 92 922 2531 2530 F 831 0.00 1330 reject_low 5 ALIGNMENT 0 YS2-14e17.q1k vc_5 92 922 2398 2397 F 831 0.00 1330 reject_low 7 ALIGNMENT 38 YS2-14e17.q1k vc_7 886 923 13525 13562 F 38 100.00 1330 reject_low 17 ALIGNMENT 57 YS2-14e17.q1k vc_4 1002 923 1454 1534 C 80 92.50 1330 reject_low 11 ALIGNMENT 39 YS2-14e17.q1k vc_5 923 885 5025 5063 C 39 100.00 1330 reject_low 15 ALIGNMENT 0 YS2-14e17.q1k vc_4 922 92 5813 5812 C 831 0.00 1330 reject_low 6 ALIGNMENT 41 YS2-14e17.q1k vc_3 923 883 2472 2512 C 41 100.00 1330 reject_low 14 ALIGNMENT 36 YS2-14e17.q1k vc_5 920 885 1 36 C 36 100.00 1330 reject_low 18 ALIGNMENT 0 YS2-14e17.q1k vc_5 884 92 5064 5063 C 793 0.00 1330 reject_low 15 ALIGNMENT 88 YS2-14e17.q1k vc_7 1116 923 2526 2727 C 194 84.02 1330 reject_low 8 ALIGNMENT 88 YS2-14e17.q1k vc_4 1116 923 5611 5812 C 194 84.02 1330 reject_low 6 ALIGNMENT 0 YS2-14e17.q1k vc_5 884 92 37 36 C 793 0.00 1330 reject_low 18 ALIGNMENT 0 YS2-14e17.q1k vc_3 882 92 2513 2512 C 791 0.00 1330 reject_low 14 ALIGNMENT 790 YS2-14e17.q1k chr04 31 882 391378 392235 F 852 98.24 1330 accept_chi 0 ALIGNMENT 41 YS2-14e17.q1k vc_1 923 883 2472 2512 C 41 100.00 1330 reject_low 12 ALIGNMENT 0 YS2-14e17.q1k vc_7 92 885 63 62 F 794 0.00 1330 reject_low 16 ALIGNMENT 0 YS2-14e17.q1k vc_1 882 92 2513 2512 C 791 0.00 1330 reject_low 12 ALIGNMENT 0 YS2-14e17.q1k vc_4 92 922 126 125 F 831 0.00 1330 reject_low 9 ALIGNMENT 88 YS2-14e17.q1k vc_5 923 1116 2398 2599 F 194 84.02 1330 reject_low 7 ALIGNMENT 88 YS2-14e17.q1k vc_1 923 1116 2531 2732 F 194 84.02 1330 reject_low 3 ALIGNMENT 38 YS2-14e17.q1k vc_7 886 923 63 100 F 38 100.00 1330 reject_low 16 ALIGNMENT 0 YS2-14e17.q1k vc_7 922 92 2728 2727 C 831 0.00 1330 reject_low 8 ALIGNMENT 88 YS2-14e17.p1k vc_4 906 1114 5871 6077 F 209 82.78 1383 reject_low 2 ALIGNMENT 0 YS2-14e17.q1k vc_4 924 923 5872 6353 F 0 0.00 1330 reject_low 10 ALIGNMENT 75 YS2-14e17.q1k vc_4 923 1076 6353 6511 F 154 85.06 1330|1,0 reject_low 10 ALIGNMENT 41 YS2-14e17.q1k vc_4 883 923 5831 5871 F 41 100.00 1330 reject_low 10 ALIGNMENT 0 YS2-14e17.p1k vc_4 109 905 5871 5870 F 797 0.00 1383 reject_low 2 ALIGNMENT 75 YS2-14e17.q1k vc_4 923 1076 126 284 F 154 85.06 1330 reject_low 9 ALIGNMENT 88 YS2-14e17.q1k vc_2 923 1116 2164 2365 F 194 84.02 1330 reject_low 4 ALIGNMENT 1013 YS2-14e18.q1k chr06 41 1210 193106 194283 F 1170 96.50 1364 accept 0 ALIGNMENT 1042 YS2-14e18.p1k chr06 1178 35 196798 197955 C 1144 97.64 1378 accept 0 ALIGNMENT 0 YS2-14e19.q1k vc_7 62 605 13525 13524 F 544 0.00 643 reject_low 6 ALIGNMENT 41 YS2-14e19.q1k vc_4 603 643 5831 5871 F 41 100.00 643 reject_low 4 ALIGNMENT 0 YS2-14e19.q1k vc_1 602 62 2513 2512 C 541 0.00 643 reject_low 2 ALIGNMENT 41 YS2-14e19.q1k vc_1 643 603 2472 2512 C 41 100.00 643 reject_low 2 ALIGNMENT 0 YS2-14e19.q1k vc_5 604 62 5064 5063 C 543 0.00 643 reject_low 5 ALIGNMENT 0 YS2-14e19.q1k vc_5 604 62 37 36 C 543 0.00 643 reject_low 7 ALIGNMENT 0 YS2-14e19.p1k chr04 627 609 159830 159829 C 19 0.00 627 accept_chi 0 ALIGNMENT 38 YS2-14e19.q1k vc_7 606 643 13525 13562 F 38 100.00 643 reject_low 6 ALIGNMENT 540 YS2-14e19.q1k chr04 31 603 159836 160410 F 573 98.60 643 accept_chi 1 ALIGNMENT 0 YS2-14e19.q1k vc_4 62 602 5831 5830 F 541 0.00 643 reject_low 4 ALIGNMENT 41 YS2-14e19.q1k vc_3 643 603 2472 2512 C 41 100.00 643 reject_low 3 ALIGNMENT 0 YS2-14e19.q1k vc_3 602 62 2513 2512 C 541 0.00 643 reject_low 3 ALIGNMENT 0 YS2-14e19.q1k chr04 604 643 160410 160409 F 40 0.00 643 accept_chi 1 ALIGNMENT 546 YS2-14e19.p1k chr04 608 29 159829 160410 C 580 98.62 627 accept_chi 0 ALIGNMENT 36 YS2-14e19.q1k vc_5 640 605 1 36 C 36 100.00 643 reject_low 7 ALIGNMENT 39 YS2-14e19.q1k vc_5 643 605 5025 5063 C 39 100.00 643 reject_low 5 ALIGNMENT 1014 YS2-14e20.p1k chr13 1299 35 399673 400938 C 1265 95.02 1323 accept 0 ALIGNMENT 1010 YS2-14e20.q1k chr13 43 1229 395748 396940 F 1187 95.96 1367 accept 0 ALIGNMENT 60 YS2-14e21.q1k vc_4 302 238 48 112 C 65 98.46 593 reject_low 9 ALIGNMENT 51 YS2-14e21.q1k vc_7 54 3 6360 6411 C 52 100.00 593|1,0 reject_vc 7 ALIGNMENT 298 YS2-14e21.q1k vc_1 1 302 2689 2990 F 302 99.67 593 reject_vc 4 ALIGNMENT 60 YS2-14e21.q1k vc_4 302 238 6275 6339 C 65 98.46 593 reject_low 10 ALIGNMENT 298 YS2-14e21.q1k vc_2 1 302 2322 2623 F 302 99.67 593 reject_vc 5 ALIGNMENT 64 YS2-14e21.q1k vc_7 421 311 4584 4693 C 111 87.39 593 reject_vc 7 ALIGNMENT 0 YS2-14e21.q1k vc_4 303 310 1613 1881 F 8 0.00 593 reject_vc 8 ALIGNMENT 0 YS2-14e21.q1k vc_4 62 237 1548 1547 F 176 0.00 593 reject_vc 8 ALIGNMENT 0 YS2-14e21.q1k vc_7 310 303 4694 4922 C 8 0.00 593 reject_vc 7 ALIGNMENT 398 YS2-14e21.q1k vc_7 529 1 2042 2569 C 529 92.06 593 reject_vc 2 ALIGNMENT 243 YS2-14e21.q1k vc_7 302 53 4923 5172 C 250 99.20 593|0,1 reject_vc 7 ALIGNMENT 356 YS2-14e21.q1k vc_4 421 1 5233 5654 C 421 95.25 593 reject_vc 3 ALIGNMENT 60 YS2-14e21.q1k vc_4 238 302 1548 1612 F 65 98.46 593 reject_vc 8 ALIGNMENT 100 YS2-14e21.q1k vc_4 311 529 1882 2099 F 219 82.65 593 reject_vc 8 ALIGNMENT 298 YS2-14e21.q1k vc_3 1 302 2689 2990 F 302 99.67 593 reject_vc 6 ALIGNMENT 0 YS2-14e21.q1k vc_4 237 62 6340 6339 C 176 0.00 593 reject_low 10 ALIGNMENT 398 YS2-14e21.q1k vc_5 1 529 2556 3083 F 529 92.06 593 reject_vc 1 ALIGNMENT 0 YS2-14e21.q1k vc_4 237 62 113 112 C 176 0.00 593 reject_low 9 ALIGNMENT 0 YS2-14e21.p1k chr06 494 512 174601 174600 F 19 0.00 512 accept 0 ALIGNMENT 0 YS2-14e21.q1k vc_7 53 54 5172 6360 C 0 0.00 593 reject_vc 7 ALIGNMENT 409 YS2-14e21.p1k chr06 37 493 174150 174601 F 457 97.59 512 accept 0 ALIGNMENT 752 YS2-14e22.p1k scplasm1 40 820 5538 6318 F 781 99.87 1239 reject_low 1 ALIGNMENT 208 YS2-14e22.q1k vc_6 327 1 5681 6012 C 327 89.91 416 reject_vc 0 ALIGNMENT 0 YS2-14e22.p1k scplasm1 821 861 6318 6317 F 41 0.00 1239 reject_low 1 ALIGNMENT 0 YS2-14e22.p1k scplasm1 62 820 1 0 F 759 0.00 1239 reject_low 2 ALIGNMENT 234 YS2-14e22.p1k scplasm1 821 1166 1 362 F 346 91.62 1239 reject_low 2 ALIGNMENT 207 YS2-14e22.q1k scplasm1 327 2 5988 6318 C 326 89.88 416 reject_low 1 ALIGNMENT 954 YS2-14e22.p1k vc_6 72 1166 5263 6373 F 1095 97.26 1239 reject_vc 0 ALIGNMENT 76 YS2-14e23.q1k chr07 378 297 736343 736424 C 82 97.56 1259 reject_low 10 ALIGNMENT 0 YS2-14e23.q1k chr02 822 397 405853 405852 C 426 0.00 1259 reject_low 2 ALIGNMENT 940 YS2-14e23.p1k chr07 1083 33 831251 832292 C 1051 98.10 1090 accept 0 ALIGNMENT 93 YS2-14e23.q1k chr10 392 297 355274 355369 C 96 98.96 1259 reject_low 4 ALIGNMENT 0 YS2-14e23.q1k chr10 296 62 355370 355369 C 235 0.00 1259 reject_low 4 ALIGNMENT 0 YS2-14e23.q1k chr11 62 298 162486 162485 F 237 0.00 1259 reject_low 6 ALIGNMENT 100 YS2-14e23.q1k chr07 400 290 405449 405558 C 111 97.30 1259 reject_low 1 ALIGNMENT 0 YS2-14e23.q1k chr13 379 822 131898 131897 F 444 0.00 1259 reject_low 7 ALIGNMENT 0 YS2-14e23.q1k chr02 296 62 405952 405951 C 235 0.00 1259 reject_low 2 ALIGNMENT 0 YS2-14e23.q1k chr07 296 62 736425 736424 C 235 0.00 1259 reject_low 10 ALIGNMENT 0 YS2-14e23.q1k chr13 62 296 131817 131816 F 235 0.00 1259 reject_low 7 ALIGNMENT 0 YS2-14e23.q1k chr07 822 379 736344 736343 C 444 0.00 1259 reject_low 10 ALIGNMENT 0 YS2-14e23.q1k chr11 395 822 162581 162580 F 428 0.00 1259 reject_low 6 ALIGNMENT 0 YS2-14e23.q1k chr13 62 298 747885 747884 F 237 0.00 1259 reject_low 9 ALIGNMENT 0 YS2-14e23.q1k chr07 289 62 405559 405558 C 228 0.00 1259 reject_low 1 ALIGNMENT 77 YS2-14e23.q1k chr05 376 297 138666 138745 C 80 98.75 1259 reject_low 8 ALIGNMENT 0 YS2-14e23.q1k chr10 397 822 374513 374512 F 426 0.00 1259 reject_low 3 ALIGNMENT 86 YS2-14e23.q1k chr04 391 297 568864 568958 C 95 96.84 1259 reject_low 5 ALIGNMENT 88 YS2-14e23.q1k chr10 297 396 374414 374513 F 100 96.00 1259 reject_low 3 ALIGNMENT 0 YS2-14e23.q1k chr05 296 62 138746 138745 C 235 0.00 1259 reject_low 8 ALIGNMENT 0 YS2-14e23.q1k chr10 822 393 355275 355274 C 430 0.00 1259 reject_low 4 ALIGNMENT 0 YS2-14e23.q1k chr04 296 62 568959 568958 C 235 0.00 1259 reject_low 5 ALIGNMENT 81 YS2-14e23.q1k chr11 299 394 162486 162581 F 96 94.79 1259 reject_low 6 ALIGNMENT 998 YS2-14e23.q1k chr07 31 1220 828453 829630 F 1190 96.55 1259 accept 0 ALIGNMENT 79 YS2-14e23.q1k chr13 297 378 131817 131898 F 82 98.78 1259 reject_low 7 ALIGNMENT 77 YS2-14e23.q1k chr13 299 378 747885 747964 F 80 98.75 1259 reject_low 9 ALIGNMENT 0 YS2-14e23.q1k chr13 379 822 747964 747963 F 444 0.00 1259 reject_low 9 ALIGNMENT 0 YS2-14e23.q1k chr10 62 296 374414 374413 F 235 0.00 1259 reject_low 3 ALIGNMENT 0 YS2-14e23.q1k chr07 822 401 405450 405449 C 422 0.00 1259 reject_low 1 ALIGNMENT 0 YS2-14e23.q1k chr04 822 392 568865 568864 C 431 0.00 1259 reject_low 5 ALIGNMENT 88 YS2-14e23.q1k chr02 396 297 405852 405951 C 100 96.00 1259 reject_low 2 ALIGNMENT 0 YS2-14e23.q1k chr05 822 377 138667 138666 C 446 0.00 1259 reject_low 8 ALIGNMENT 0 YS2-14e24.q1k vc_3 392 62 2513 2512 C 331 0.00 433 reject_low 3 ALIGNMENT 0 YS2-14e24.q1k vc_7 62 395 13525 13524 F 334 0.00 433 reject_low 6 ALIGNMENT 41 YS2-14e24.q1k vc_4 393 433 5831 5871 F 41 100.00 433 reject_low 4 ALIGNMENT 36 YS2-14e24.q1k vc_5 430 395 1 36 C 36 100.00 433 reject_low 7 ALIGNMENT 338 YS2-14e24.p1k chr16 35 395 341587 341947 F 361 98.61 413 accept_chi 0 ALIGNMENT 41 YS2-14e24.q1k vc_1 433 393 2472 2512 C 41 100.00 433 reject_low 2 ALIGNMENT 0 YS2-14e24.q1k vc_5 394 62 37 36 C 333 0.00 433 reject_low 7 ALIGNMENT 41 YS2-14e24.q1k vc_3 433 393 2472 2512 C 41 100.00 433 reject_low 3 ALIGNMENT 0 YS2-14e24.q1k vc_4 62 392 5831 5830 F 331 0.00 433 reject_low 4 ALIGNMENT 334 YS2-14e24.q1k chr16 392 29 341587 341951 C 364 98.08 433 accept_chi 1 ALIGNMENT 38 YS2-14e24.q1k vc_7 396 433 13525 13562 F 38 100.00 433 reject_low 6 ALIGNMENT 0 YS2-14e24.p1k chr16 396 413 341947 341946 F 18 0.00 413 accept_chi 0 ALIGNMENT 0 YS2-14e24.q1k vc_5 394 62 5064 5063 C 333 0.00 433 reject_low 5 ALIGNMENT 0 YS2-14e24.q1k vc_1 392 62 2513 2512 C 331 0.00 433 reject_low 2 ALIGNMENT 0 YS2-14e24.q1k chr16 433 393 341588 341587 C 41 0.00 433 accept_chi 1 ALIGNMENT 39 YS2-14e24.q1k vc_5 433 395 5025 5063 C 39 100.00 433 reject_low 5 ALIGNMENT 87 YS2-14f01.q1k vc_7 413 305 4589 4699 C 109 94.50 763 reject_vc 8 ALIGNMENT 65 YS2-14f01.q1k vc_4 304 238 6273 6339 C 67 100.00 763 reject_low 10 ALIGNMENT 0 YS2-14f01.q1k vc_7 53 54 5172 6360 C 0 0.00 763 reject_vc 8 ALIGNMENT 458 YS2-14f01.q1k vc_5 1 645 2556 3216 F 645 91.16 763 reject_vc 1 ALIGNMENT 456 YS2-14f01.q1k vc_7 620 1 1936 2569 C 620 91.94 763 reject_vc 2 ALIGNMENT 296 YS2-14f01.q1k vc_1 1 303 2689 2991 F 303 99.34 763 reject_vc 4 ALIGNMENT 65 YS2-14f01.q1k vc_4 304 238 46 112 C 67 100.00 763 reject_low 9 ALIGNMENT 0 YS2-14f01.p1k chr16 414 430 263198 263197 F 17 0.00 430 accept 0 ALIGNMENT 0 YS2-14f01.q1k vc_4 237 62 113 112 C 176 0.00 763 reject_low 9 ALIGNMENT 241 YS2-14f01.q1k vc_7 303 53 4922 5172 C 251 98.80 763|0,1 reject_vc 8 ALIGNMENT 0 YS2-14f01.q1k vc_4 305 307 1615 1878 F 3 0.00 763 reject_vc 7 ALIGNMENT 51 YS2-14f01.q1k vc_7 54 3 6360 6411 C 52 100.00 763|1,0 reject_vc 8 ALIGNMENT 65 YS2-14f01.q1k vc_4 238 304 1548 1614 F 67 100.00 763 reject_vc 7 ALIGNMENT 379 YS2-14f01.q1k vc_4 413 1 5238 5654 C 413 97.58 763 reject_vc 3 ALIGNMENT 0 YS2-14f01.q1k vc_4 62 237 1548 1547 F 176 0.00 763 reject_vc 7 ALIGNMENT 0 YS2-14f01.q1k vc_4 237 62 6340 6339 C 176 0.00 763 reject_low 10 ALIGNMENT 0 YS2-14f01.q1k vc_7 304 304 4700 4921 C 1 0.00 763 reject_vc 8 ALIGNMENT 377 YS2-14f01.p1k chr16 31 413 262816 263198 F 383 100.00 430 accept 0 ALIGNMENT 296 YS2-14f01.q1k vc_3 1 303 2689 2991 F 303 99.34 763 reject_vc 6 ALIGNMENT 296 YS2-14f01.q1k vc_2 1 303 2322 2624 F 303 99.34 763 reject_vc 5 ALIGNMENT 155 YS2-14f01.q1k vc_4 308 645 1879 2232 F 338 83.73 763 reject_vc 7 ALIGNMENT 674 YS2-14f03.q1k chr13 1147 37 102894 104003 C 1111 87.94 1363 accept 0 ALIGNMENT 20 YS2-14f04.q1k vc_3 44 23 2508 2529 C 22 90.91 363 reject_low 4 ALIGNMENT 0 YS2-14f04.q1k vc_5 324 62 5064 5063 C 263 0.00 363 reject_low 6 ALIGNMENT 20 YS2-14f04.q1k vc_2 44 23 2141 2162 C 22 90.91 363 reject_low 3 ALIGNMENT 41 YS2-14f04.q1k vc_3 363 323 2472 2512 C 41 100.00 363 reject_low 4 ALIGNMENT 39 YS2-14f04.q1k vc_5 363 325 5025 5063 C 39 100.00 363 reject_low 6 ALIGNMENT 0 YS2-14f04.q1k vc_5 324 62 37 36 C 263 0.00 363 reject_low 8 ALIGNMENT 228 YS2-14f04.q1k chr04 44 322 979606 979884 F 279 96.06 363 accept_chi 1 ALIGNMENT 0 YS2-14f04.q1k vc_4 45 322 5836 5830 F 278 0.00 363 reject_low 5 ALIGNMENT 20 YS2-14f04.q1k vc_4 23 44 5814 5835 F 22 90.91 363 reject_low 5 ALIGNMENT 0 YS2-14f04.q1k chr04 323 363 979884 979883 F 41 0.00 363 accept_chi 1 ALIGNMENT 0 YS2-14f04.q1k vc_3 322 45 2513 2507 C 278 0.00 363 reject_low 4 ALIGNMENT 38 YS2-14f04.q1k vc_7 326 363 13525 13562 F 38 100.00 363 reject_low 7 ALIGNMENT 36 YS2-14f04.q1k vc_5 360 325 1 36 C 36 100.00 363 reject_low 8 ALIGNMENT 0 YS2-14f04.q1k vc_1 322 45 2513 2507 C 278 0.00 363 reject_low 2 ALIGNMENT 41 YS2-14f04.q1k vc_2 363 323 2105 2145 C 41 100.00 363 reject_low 3 ALIGNMENT 41 YS2-14f04.q1k vc_4 323 363 5831 5871 F 41 100.00 363 reject_low 5 ALIGNMENT 0 YS2-14f04.p1k chr04 330 312 979604 979603 C 19 0.00 330 accept_chi 0 ALIGNMENT 0 YS2-14f04.q1k vc_2 322 45 2146 2140 C 278 0.00 363 reject_low 3 ALIGNMENT 41 YS2-14f04.q1k vc_1 363 323 2472 2512 C 41 100.00 363 reject_low 2 ALIGNMENT 20 YS2-14f04.q1k vc_1 44 23 2508 2529 C 22 90.91 363 reject_low 2 ALIGNMENT 228 YS2-14f04.p1k chr04 311 32 979603 979884 C 280 95.71 330 accept_chi 0 ALIGNMENT 0 YS2-14f04.q1k vc_7 62 325 13525 13524 F 264 0.00 363 reject_low 7 ALIGNMENT 51 YS2-14f05.q1k vc_7 54 3 6360 6411 C 52 100.00 836|1,0 reject_low 12 ALIGNMENT 348 YS2-14f05.p1k vc_7 1 591 13918 14518 F 591 87.65 638 reject_low 5 ALIGNMENT 0 YS2-14f05.q1k vc_4 62 237 1548 1547 F 176 0.00 836 reject_low 11 ALIGNMENT 0 YS2-14f05.q1k vc_7 53 54 5172 6360 C 0 0.00 836 reject_low 12 ALIGNMENT 238 YS2-14f05.q1k vc_7 303 53 4922 5172 C 251 98.41 836|0,1 reject_low 12 ALIGNMENT 56 YS2-14f05.q1k vc_4 238 304 1548 1614 F 67 95.52 836 reject_low 11 ALIGNMENT 378 YS2-14f05.q1k vc_4 419 1 5234 5654 C 419 97.14 836 reject_low 7 ALIGNMENT 349 YS2-14f05.p1k vc_6 1 539 3712 4256 F 539 89.61 638 reject_low 6 ALIGNMENT 453 YS2-14f05.q1k vc_7 581 1 1983 2569 C 581 93.29 836 reject_low 1 ALIGNMENT 354 YS2-14f05.p1k vc_3 591 1 1149 1749 C 591 87.99 638 reject_low 4 ALIGNMENT 293 YS2-14f05.q1k vc_3 1 303 2689 2991 F 303 99.01 836 reject_low 10 ALIGNMENT 164 YS2-14f05.q1k vc_4 308 658 1879 2245 F 351 84.33 836 reject_low 11 ALIGNMENT 0 YS2-14f05.q1k vc_4 237 62 113 112 C 176 0.00 836 reject_low 13 ALIGNMENT 0 YS2-14f05.q1k vc_7 304 304 4700 4921 C 1 0.00 836 reject_low 12 ALIGNMENT 464 YS2-14f05.q1k vc_5 1 658 2556 3229 F 658 91.19 836 reject_vc 0 ALIGNMENT 56 YS2-14f05.q1k vc_4 304 238 6273 6339 C 67 95.52 836 reject_low 14 ALIGNMENT 354 YS2-14f05.p1k vc_1 591 1 1149 1749 C 591 87.99 638 reject_low 2 ALIGNMENT 348 YS2-14f05.p1k vc_7 1 591 456 1056 F 591 87.65 638 reject_low 1 ALIGNMENT 56 YS2-14f05.q1k vc_4 304 238 46 112 C 67 95.52 836 reject_low 13 ALIGNMENT 293 YS2-14f05.q1k vc_2 1 303 2322 2624 F 303 99.01 836 reject_low 9 ALIGNMENT 293 YS2-14f05.q1k vc_1 1 303 2689 2991 F 303 99.01 836 reject_low 8 ALIGNMENT 90 YS2-14f05.q1k vc_7 419 305 4585 4699 C 115 93.91 836 reject_low 12 ALIGNMENT 357 YS2-14f05.p1k vc_5 591 1 4069 4669 C 591 88.16 638 reject_vc 0 ALIGNMENT 0 YS2-14f05.q1k vc_4 237 62 6340 6339 C 176 0.00 836 reject_low 14 ALIGNMENT 354 YS2-14f05.p1k vc_2 591 1 1149 1749 C 591 87.99 638 reject_low 3 ALIGNMENT 0 YS2-14f05.q1k vc_4 305 307 1615 1878 F 3 0.00 836 reject_low 11 ALIGNMENT 20 YS2-14f06.q1k vc_3 43 23 2509 2529 C 21 100.00 253 reject_low 8 ALIGNMENT 0 YS2-14f06.q1k vc_3 212 44 2513 2508 C 169 0.00 253 reject_low 8 ALIGNMENT 41 YS2-14f06.q1k vc_4 213 253 5831 5871 F 41 100.00 253 reject_low 9 ALIGNMENT 20 YS2-14f06.q1k vc_1 43 23 2509 2529 C 21 100.00 253 reject_low 6 ALIGNMENT 0 YS2-14f06.q1k vc_7 62 215 63 62 F 154 0.00 253 reject_low 4 ALIGNMENT 166 YS2-14f06.q1k chr16 40 213 890442 890615 F 174 98.85 253 accept_chi 0 ALIGNMENT 0 YS2-14f06.q1k vc_4 44 212 5835 5830 F 169 0.00 253 reject_low 9 ALIGNMENT 0 YS2-14f06.p1k chr16 222 204 890443 890442 C 19 0.00 222 accept_chi 1 ALIGNMENT 161 YS2-14f06.p1k chr16 203 31 890442 890615 C 173 98.27 222 accept_chi 1 ALIGNMENT 41 YS2-14f06.q1k vc_2 253 213 2105 2145 C 41 100.00 253 reject_low 7 ALIGNMENT 0 YS2-14f06.q1k vc_2 212 44 2146 2141 C 169 0.00 253 reject_low 7 ALIGNMENT 20 YS2-14f06.q1k vc_7 23 43 2729 2749 F 21 100.00 253 reject_low 2 ALIGNMENT 39 YS2-14f06.q1k vc_5 253 215 5025 5063 C 39 100.00 253 reject_low 3 ALIGNMENT 38 YS2-14f06.q1k vc_7 216 253 63 100 F 38 100.00 253 reject_low 4 ALIGNMENT 38 YS2-14f06.q1k vc_7 216 253 13525 13562 F 38 100.00 253 reject_low 5 ALIGNMENT 20 YS2-14f06.q1k vc_2 43 23 2142 2162 C 21 100.00 253 reject_low 7 ALIGNMENT 41 YS2-14f06.q1k vc_3 253 213 2472 2512 C 41 100.00 253 reject_low 8 ALIGNMENT 0 YS2-14f06.q1k vc_7 44 253 2749 2748 F 210 0.00 253 reject_low 2 ALIGNMENT 0 YS2-14f06.q1k vc_5 214 62 37 36 C 153 0.00 253 reject_low 10 ALIGNMENT 0 YS2-14f06.q1k vc_7 62 215 13525 13524 F 154 0.00 253 reject_low 5 ALIGNMENT 36 YS2-14f06.q1k vc_5 250 215 1 36 C 36 100.00 253 reject_low 10 ALIGNMENT 0 YS2-14f06.q1k chr16 214 253 890615 890614 F 40 0.00 253 accept_chi 0 ALIGNMENT 0 YS2-14f06.q1k vc_5 214 62 5064 5063 C 153 0.00 253 reject_low 3 ALIGNMENT 41 YS2-14f06.q1k vc_1 253 213 2472 2512 C 41 100.00 253 reject_low 6 ALIGNMENT 0 YS2-14f06.q1k vc_1 212 44 2513 2508 C 169 0.00 253 reject_low 6 ALIGNMENT 20 YS2-14f06.q1k vc_4 23 43 5814 5834 F 21 100.00 253 reject_low 9 ALIGNMENT 38 YS2-14f07.q1k vc_7 169 206 13525 13562 F 38 100.00 206 reject_low 5 ALIGNMENT 39 YS2-14f07.q1k vc_5 206 168 5025 5063 C 39 100.00 206 reject_low 4 ALIGNMENT 0 YS2-14f07.q1k vc_5 167 62 5064 5063 C 106 0.00 206 reject_low 4 ALIGNMENT 0 YS2-14f07.q1k vc_4 62 165 5831 5830 F 104 0.00 206 reject_low 3 ALIGNMENT 41 YS2-14f07.q1k vc_1 206 166 2472 2512 C 41 100.00 206 reject_low 1 ALIGNMENT 41 YS2-14f07.q1k vc_3 206 166 2472 2512 C 41 100.00 206 reject_low 2 ALIGNMENT 0 YS2-14f07.q1k vc_5 167 62 37 36 C 106 0.00 206 reject_low 6 ALIGNMENT 0 YS2-14f07.q1k vc_7 62 168 13525 13524 F 107 0.00 206 reject_low 5 ALIGNMENT 0 YS2-14f07.q1k chr10 206 166 500241 500240 C 41 0.00 206 accept 0 ALIGNMENT 130 YS2-14f07.q1k chr10 165 30 500240 500375 C 136 100.00 206 accept 0 ALIGNMENT 41 YS2-14f07.q1k vc_4 166 206 5831 5871 F 41 100.00 206 reject_low 3 ALIGNMENT 0 YS2-14f07.q1k vc_1 165 62 2513 2512 C 104 0.00 206 reject_low 1 ALIGNMENT 0 YS2-14f07.q1k vc_3 165 62 2513 2512 C 104 0.00 206 reject_low 2 ALIGNMENT 36 YS2-14f07.q1k vc_5 203 168 1 36 C 36 100.00 206 reject_low 6 ALIGNMENT 634 YS2-14f09.q1k chr04 1068 36 1007066 1008102 C 1033 88.48 1393 accept 0 ALIGNMENT 533 YS2-14f09.p1k chr04 30 891 1002794 1003654 F 862 88.28 1318 accept 0 ALIGNMENT 909 YS2-14f11.p1k chr09 35 1198 79189 80348 F 1164 95.10 1204 accept 0 ALIGNMENT 952 YS2-14f11.q1k chr09 1174 40 82525 83665 C 1135 95.24 1407 accept 0 ALIGNMENT 0 YS2-14f12.q1k vc_5 922 908 2 1 C 15 0.00 1403 reject_low 16 ALIGNMENT 41 YS2-14f12.q1k vc_4 870 910 5831 5871 F 41 100.00 1403 reject_low 9 ALIGNMENT 0 YS2-14f12.q1k vc_4 909 62 1535 1534 C 848 0.00 1403 reject_low 10 ALIGNMENT 41 YS2-14f12.q1k vc_1 910 870 2472 2512 C 41 100.00 1403 reject_low 11 ALIGNMENT 0 YS2-14f12.q1k vc_2 62 909 2164 2163 F 848 0.00 1403 reject_low 3 ALIGNMENT 168 YS2-14f12.q1k vc_2 910 1195 2164 2463 F 286 87.76 1403 reject_low 3 ALIGNMENT 0 YS2-14f12.q1k vc_7 909 62 2728 2727 C 848 0.00 1403 reject_low 6 ALIGNMENT 39 YS2-14f12.q1k vc_5 910 872 5025 5063 C 39 100.00 1403 reject_low 14 ALIGNMENT 158 YS2-14f12.q1k vc_4 1163 910 5548 5812 C 254 88.58 1403 reject_low 7 ALIGNMENT 0 YS2-14f12.q1k chr12 870 922 396933 396932 F 53 0.00 1403 accept_chi 0 ALIGNMENT 0 YS2-14f12.q1k vc_7 62 872 13525 13524 F 811 0.00 1403 reject_low 15 ALIGNMENT 168 YS2-14f12.q1k vc_1 910 1195 2531 2830 F 286 87.76 1403 reject_low 2 ALIGNMENT 0 YS2-14f12.q1k vc_4 909 62 5813 5812 C 848 0.00 1403 reject_low 7 ALIGNMENT 0 YS2-14f12.q1k vc_5 871 62 5064 5063 C 810 0.00 1403 reject_low 14 ALIGNMENT 41 YS2-14f12.q1k vc_3 910 870 2472 2512 C 41 100.00 1403 reject_low 13 ALIGNMENT 787 YS2-14f12.p1k chr12 857 33 396108 396933 C 825 99.64 861 accept_chi 1 ALIGNMENT 0 YS2-14f12.q1k vc_3 869 62 2513 2512 C 808 0.00 1403 reject_low 13 ALIGNMENT 0 YS2-14f12.q1k vc_4 62 909 126 125 F 848 0.00 1403 reject_low 8 ALIGNMENT 788 YS2-14f12.q1k chr12 43 869 396108 396933 F 827 99.64 1403 accept_chi 0 ALIGNMENT 0 YS2-14f12.q1k vc_3 62 909 2531 2530 F 848 0.00 1403 reject_low 4 ALIGNMENT 168 YS2-14f12.q1k vc_7 1195 910 2428 2727 C 286 87.76 1403 reject_low 6 ALIGNMENT 36 YS2-14f12.q1k vc_5 907 872 1 36 C 36 100.00 1403 reject_low 16 ALIGNMENT 123 YS2-14f12.q1k vc_4 910 1070 126 287 F 161 92.55 1403 reject_low 8 ALIGNMENT 0 YS2-14f12.q1k vc_1 869 62 2513 2512 C 808 0.00 1403 reject_low 11 ALIGNMENT 73 YS2-14f12.q1k vc_4 998 910 1446 1534 C 89 94.38 1403 reject_low 10 ALIGNMENT 0 YS2-14f12.q1k vc_5 871 62 37 36 C 810 0.00 1403 reject_low 16 ALIGNMENT 168 YS2-14f12.q1k vc_5 910 1195 2398 2697 F 286 87.76 1403 reject_low 5 ALIGNMENT 0 YS2-14f12.q1k vc_1 62 909 2531 2530 F 848 0.00 1403 reject_low 2 ALIGNMENT 38 YS2-14f12.q1k vc_7 873 910 13525 13562 F 38 100.00 1403 reject_low 15 ALIGNMENT 41 YS2-14f12.q1k vc_2 910 870 2105 2145 C 41 100.00 1403 reject_low 12 ALIGNMENT 123 YS2-14f12.q1k vc_4 910 1070 6353 6514 F 161 92.55 1403|1,0 reject_low 9 ALIGNMENT 0 YS2-14f12.q1k vc_4 62 869 5831 5830 F 808 0.00 1403 reject_low 9 ALIGNMENT 168 YS2-14f12.q1k vc_3 910 1195 2531 2830 F 286 87.76 1403 reject_low 4 ALIGNMENT 0 YS2-14f12.q1k vc_4 911 910 5872 6353 F 0 0.00 1403 reject_low 9 ALIGNMENT 0 YS2-14f12.q1k vc_2 869 62 2146 2145 C 808 0.00 1403 reject_low 12 ALIGNMENT 0 YS2-14f12.q1k vc_5 62 909 2398 2397 F 848 0.00 1403 reject_low 5 ALIGNMENT 966 YS2-14f13.p1k chr07 1128 36 922389 923475 C 1093 97.90 1190 accept 0 ALIGNMENT 985 YS2-14f13.q1k chr07 33 1166 921846 922986 F 1134 97.35 1387 accept 0 ALIGNMENT 39 YS2-14f14.q1k vc_5 362 324 5025 5063 C 39 100.00 362 reject_low 6 ALIGNMENT 0 YS2-14f14.p1k chr04 314 332 1003979 1003978 F 19 0.00 332 accept_chi 1 ALIGNMENT 41 YS2-14f14.q1k vc_3 362 322 2472 2512 C 41 100.00 362 reject_low 4 ALIGNMENT 38 YS2-14f14.q1k vc_7 325 362 13525 13562 F 38 100.00 362 reject_low 7 ALIGNMENT 0 YS2-14f14.q1k vc_2 321 62 2146 2145 C 260 0.00 362 reject_low 3 ALIGNMENT 0 YS2-14f14.q1k chr04 362 322 1003700 1003699 C 41 0.00 362 accept_chi 0 ALIGNMENT 0 YS2-14f14.q1k vc_5 323 62 37 36 C 262 0.00 362 reject_low 8 ALIGNMENT 249 YS2-14f14.p1k chr04 34 313 1003699 1003979 F 280 97.86 332 accept_chi 1 ALIGNMENT 36 YS2-14f14.q1k vc_5 359 324 1 36 C 36 100.00 362 reject_low 8 ALIGNMENT 250 YS2-14f14.q1k chr04 321 45 1003699 1003975 C 277 98.19 362 accept_chi 0 ALIGNMENT 0 YS2-14f14.q1k vc_3 321 62 2513 2512 C 260 0.00 362 reject_low 4 ALIGNMENT 41 YS2-14f14.q1k vc_1 362 322 2472 2512 C 41 100.00 362 reject_low 2 ALIGNMENT 0 YS2-14f14.q1k vc_7 62 324 13525 13524 F 263 0.00 362 reject_low 7 ALIGNMENT 0 YS2-14f14.q1k vc_5 323 62 5064 5063 C 262 0.00 362 reject_low 6 ALIGNMENT 41 YS2-14f14.q1k vc_2 362 322 2105 2145 C 41 100.00 362 reject_low 3 ALIGNMENT 41 YS2-14f14.q1k vc_4 322 362 5831 5871 F 41 100.00 362 reject_low 5 ALIGNMENT 0 YS2-14f14.q1k vc_4 62 321 5831 5830 F 260 0.00 362 reject_low 5 ALIGNMENT 0 YS2-14f14.q1k vc_1 321 62 2513 2512 C 260 0.00 362 reject_low 2 ALIGNMENT 0 YS2-14f16.q1k vc_1 698 62 2514 2513 C 637 0.00 1407 reject_low 12 ALIGNMENT 0 YS2-14f16.q1k vc_5 701 62 5064 5063 C 640 0.00 1407 reject_low 15 ALIGNMENT 0 YS2-14f16.q1k vc_7 62 702 13525 13524 F 641 0.00 1407 reject_low 17 ALIGNMENT 0 YS2-14f16.q1k vc_5 701 62 37 36 C 640 0.00 1407 reject_low 18 ALIGNMENT 42 YS2-14f16.q1k vc_4 699 740 5830 5871 F 42 100.00 1407 reject_low 9 ALIGNMENT 42 YS2-14f16.q1k vc_3 740 699 2472 2513 C 42 100.00 1407 reject_low 14 ALIGNMENT 348 YS2-14f16.q1k vc_2 740 1197 2164 2618 F 458 93.01 1407 reject_low 6 ALIGNMENT 0 YS2-14f16.q1k vc_4 739 62 5813 5812 C 678 0.00 1407 reject_low 4 ALIGNMENT 0 YS2-14f16.q1k vc_7 739 62 2728 2727 C 678 0.00 1407 reject_low 3 ALIGNMENT 0 YS2-14f16.q1k vc_3 856 741 2473 2472 C 116 0.00 1407 reject_low 14 ALIGNMENT 0 YS2-14f16.q1k vc_4 739 62 1535 1534 C 678 0.00 1407 reject_low 11 ALIGNMENT 159 YS2-14f16.q1k vc_4 740 901 6353 6514 F 162 100.00 1407|1,0 reject_low 9 ALIGNMENT 0 YS2-14f16.p1k chr15 699 717 1028727 1028726 F 19 0.00 717 accept_chi 1 ALIGNMENT 0 YS2-14f16.q1k vc_7 741 856 100 99 F 116 0.00 1407 reject_low 16 ALIGNMENT 0 YS2-14f16.q1k vc_2 698 62 2147 2146 C 637 0.00 1407 reject_low 13 ALIGNMENT 42 YS2-14f16.q1k vc_1 740 699 2472 2513 C 42 100.00 1407 reject_low 12 ALIGNMENT 38 YS2-14f16.q1k vc_7 703 740 63 100 F 38 100.00 1407 reject_low 16 ALIGNMENT 0 YS2-14f16.q1k vc_5 62 739 2398 2397 F 678 0.00 1407 reject_low 2 ALIGNMENT 0 YS2-14f16.q1k vc_4 62 698 5830 5829 F 637 0.00 1407 reject_low 9 ALIGNMENT 0 YS2-14f16.q1k chr15 856 701 1028061 1028060 C 156 0.00 1407 accept_chi 0 ALIGNMENT 646 YS2-14f16.q1k chr15 700 32 1028060 1028727 C 669 99.85 1407 accept_chi 0 ALIGNMENT 0 YS2-14f16.q1k vc_2 856 741 2106 2105 C 116 0.00 1407 reject_low 13 ALIGNMENT 0 YS2-14f16.q1k vc_7 899 62 6412 6411 C 838 0.00 1407 reject_low 10 ALIGNMENT 365 YS2-14f16.q1k vc_4 1277 740 5270 5812 C 538 90.71 1407 reject_low 4 ALIGNMENT 38 YS2-14f16.q1k vc_7 703 740 13525 13562 F 38 100.00 1407 reject_low 17 ALIGNMENT 0 YS2-14f16.q1k vc_1 856 741 2473 2472 C 116 0.00 1407 reject_low 12 ALIGNMENT 0 YS2-14f16.q1k vc_4 62 739 126 125 F 678 0.00 1407 reject_low 8 ALIGNMENT 139 YS2-14f16.q1k vc_7 1197 950 4928 5172 C 248 87.10 1407|0,1 reject_low 10 ALIGNMENT 159 YS2-14f16.q1k vc_4 740 901 126 287 F 162 100.00 1407 reject_low 8 ALIGNMENT 39 YS2-14f16.q1k vc_5 740 702 5025 5063 C 39 100.00 1407 reject_low 15 ALIGNMENT 372 YS2-14f16.q1k vc_5 740 1277 2398 2938 F 538 91.26 1407 reject_low 2 ALIGNMENT 48 YS2-14f16.q1k vc_7 951 900 6360 6411 C 52 98.08 1407|1,0 reject_low 10 ALIGNMENT 0 YS2-14f16.q1k vc_3 62 739 2531 2530 F 678 0.00 1407 reject_low 7 ALIGNMENT 0 YS2-14f16.q1k vc_3 698 62 2514 2513 C 637 0.00 1407 reject_low 14 ALIGNMENT 0 YS2-14f16.q1k vc_5 856 741 5026 5025 C 116 0.00 1407 reject_low 15 ALIGNMENT 645 YS2-14f16.p1k chr15 32 698 1028060 1028727 F 667 99.85 717 accept_chi 1 ALIGNMENT 0 YS2-14f16.q1k vc_4 856 829 1447 1446 C 28 0.00 1407 reject_low 11 ALIGNMENT 348 YS2-14f16.q1k vc_3 740 1197 2531 2985 F 458 93.01 1407 reject_low 7 ALIGNMENT 0 YS2-14f16.q1k vc_5 856 738 2 1 C 119 0.00 1407 reject_low 18 ALIGNMENT 0 YS2-14f16.q1k vc_7 62 702 63 62 F 641 0.00 1407 reject_low 16 ALIGNMENT 0 YS2-14f16.q1k vc_7 950 951 5172 6360 C 0 0.00 1407 reject_low 10 ALIGNMENT 0 YS2-14f16.q1k vc_4 741 740 5872 6353 F 0 0.00 1407 reject_low 9 ALIGNMENT 372 YS2-14f16.q1k vc_7 1277 740 2187 2727 C 538 91.08 1407 reject_low 3 ALIGNMENT 348 YS2-14f16.q1k vc_1 740 1197 2531 2985 F 458 93.01 1407 reject_low 5 ALIGNMENT 0 YS2-14f16.q1k vc_2 62 739 2164 2163 F 678 0.00 1407 reject_low 6 ALIGNMENT 36 YS2-14f16.q1k vc_5 737 702 1 36 C 36 100.00 1407 reject_low 18 ALIGNMENT 0 YS2-14f16.q1k vc_1 62 739 2531 2530 F 678 0.00 1407 reject_low 5 ALIGNMENT 42 YS2-14f16.q1k vc_2 740 699 2105 2146 C 42 100.00 1407 reject_low 13 ALIGNMENT 87 YS2-14f16.q1k vc_4 828 740 1446 1534 C 89 100.00 1407 reject_low 11 ALIGNMENT 0 YS2-14f16.q1k vc_7 741 856 13562 13561 F 116 0.00 1407 reject_low 17 ALIGNMENT 0 YS2-14f18.q1k vc_7 53 54 5172 6360 C 0 0.00 790 reject_vc 8 ALIGNMENT 0 YS2-14f18.q1k vc_4 305 307 1615 1878 F 3 0.00 790 reject_vc 7 ALIGNMENT 488 YS2-14f18.q1k vc_5 1 696 2556 3253 F 696 90.95 790 reject_vc 1 ALIGNMENT 302 YS2-14f18.q1k vc_3 1 303 2689 2991 F 303 100.00 790 reject_vc 6 ALIGNMENT 0 YS2-14f18.q1k vc_7 304 304 4700 4921 C 1 0.00 790 reject_vc 8 ALIGNMENT 0 YS2-14f18.q1k vc_4 62 237 1548 1547 F 176 0.00 790 reject_vc 7 ALIGNMENT 481 YS2-14f18.q1k vc_7 677 1 1892 2569 C 677 91.43 790 reject_vc 2 ALIGNMENT 175 YS2-14f18.q1k vc_4 308 696 1879 2269 F 389 83.55 790 reject_vc 7 ALIGNMENT 51 YS2-14f18.q1k vc_7 54 3 6360 6411 C 52 100.00 790|1,0 reject_vc 8 ALIGNMENT 302 YS2-14f18.q1k vc_1 1 303 2689 2991 F 303 100.00 790 reject_vc 4 ALIGNMENT 94 YS2-14f18.q1k vc_7 421 305 4583 4699 C 117 94.87 790 reject_vc 8 ALIGNMENT 0 YS2-14f18.q1k vc_4 237 62 6340 6339 C 176 0.00 790 reject_low 10 ALIGNMENT 65 YS2-14f18.q1k vc_4 238 304 1548 1614 F 67 100.00 790 reject_vc 7 ALIGNMENT 65 YS2-14f18.q1k vc_4 304 238 6273 6339 C 67 100.00 790 reject_low 10 ALIGNMENT 0 YS2-14f18.p1k chrm 424 406 55683 55682 C 19 0.00 424 accept 0 ALIGNMENT 65 YS2-14f18.q1k vc_4 304 238 46 112 C 67 100.00 790 reject_low 9 ALIGNMENT 247 YS2-14f18.q1k vc_7 303 53 4922 5172 C 251 99.60 790|0,1 reject_vc 8 ALIGNMENT 219 YS2-14f18.p1k chrm 405 30 55682 56055 C 376 99.20 424 accept 0 ALIGNMENT 302 YS2-14f18.q1k vc_2 1 303 2322 2624 F 303 100.00 790 reject_vc 5 ALIGNMENT 0 YS2-14f18.q1k vc_4 237 62 113 112 C 176 0.00 790 reject_low 9 ALIGNMENT 392 YS2-14f18.q1k vc_4 421 1 5232 5654 C 421 98.10 790 reject_vc 3 ALIGNMENT 1040 YS2-14f20.p1k chr16 1254 37 399062 400291 C 1218 96.39 1320 accept_chi 0 ALIGNMENT 681 YS2-14f20.q1k scplasm1 32 1097 1885 2955 F 1066 88.74 1329 accept_chi 1 ALIGNMENT 589 YS2-14f22.q1k chr05 1000 42 322856 323814 C 959 87.80 1299 reject_low 1 ALIGNMENT 1046 YS2-14f22.q1k chr09 42 1253 221355 222578 F 1212 96.45 1299 accept 0 ALIGNMENT 999 YS2-14f22.p1k chr09 1234 30 224732 225945 C 1205 96.27 1246 accept 0 ALIGNMENT 878 YS2-14f23.p1k chr05 36 1023 376387 377361 F 988 97.77 1154 accept 0 ALIGNMENT 938 YS2-14f23.q1k chr05 1128 31 379043 380152 C 1098 95.99 1248 accept 0 ALIGNMENT 0 YS2-14f24.p1k chr13 324 342 265698 265697 F 19 0.00 342 accept 0 ALIGNMENT 275 YS2-14f24.p1k chr13 30 323 265406 265698 F 294 99.32 342 accept 0 ALIGNMENT 0 YS2-14g01.q1k vc_7 879 62 6412 6411 C 818 0.00 1368 reject_low 10 ALIGNMENT 39 YS2-14g01.q1k vc_5 720 682 5025 5063 C 39 100.00 1368 reject_low 15 ALIGNMENT 336 YS2-14g01.q1k vc_2 720 1183 2164 2623 F 464 92.46 1368 reject_low 6 ALIGNMENT 41 YS2-14g01.q1k vc_3 720 680 2472 2512 C 41 100.00 1368 reject_low 14 ALIGNMENT 0 YS2-14g01.q1k vc_5 871 721 5026 5025 C 151 0.00 1368 reject_low 15 ALIGNMENT 38 YS2-14g01.q1k vc_7 683 720 63 100 F 38 100.00 1368 reject_low 16 ALIGNMENT 0 YS2-14g01.q1k vc_7 721 871 100 99 F 151 0.00 1368 reject_low 16 ALIGNMENT 0 YS2-14g01.q1k vc_1 679 62 2513 2512 C 618 0.00 1368 reject_low 12 ALIGNMENT 0 YS2-14g01.q1k vc_7 928 929 5172 6360 C 0 0.00 1368 reject_low 10 ALIGNMENT 0 YS2-14g01.q1k vc_4 721 720 5872 6353 F 0 0.00 1368 reject_low 9 ALIGNMENT 159 YS2-14g01.q1k vc_4 720 881 6353 6514 F 162 100.00 1368|1,0 reject_low 9 ALIGNMENT 0 YS2-14g01.q1k vc_3 871 721 2473 2472 C 151 0.00 1368 reject_low 14 ALIGNMENT 36 YS2-14g01.q1k vc_5 717 682 1 36 C 36 100.00 1368 reject_low 18 ALIGNMENT 0 YS2-14g01.q1k vc_2 871 721 2106 2105 C 151 0.00 1368 reject_low 13 ALIGNMENT 369 YS2-14g01.q1k vc_7 1306 720 2141 2727 C 587 89.61 1368 reject_low 3 ALIGNMENT 159 YS2-14g01.q1k vc_4 720 881 126 287 F 162 100.00 1368 reject_low 8 ALIGNMENT 0 YS2-14g01.q1k vc_7 62 682 13525 13524 F 621 0.00 1368 reject_low 17 ALIGNMENT 0 YS2-14g01.q1k vc_4 719 62 1535 1534 C 658 0.00 1368 reject_low 11 ALIGNMENT 0 YS2-14g01.q1k vc_1 871 721 2473 2472 C 151 0.00 1368 reject_low 12 ALIGNMENT 0 YS2-14g01.q1k vc_1 62 719 2531 2530 F 658 0.00 1368 reject_low 5 ALIGNMENT 41 YS2-14g01.q1k vc_1 720 680 2472 2512 C 41 100.00 1368 reject_low 12 ALIGNMENT 361 YS2-14g01.q1k vc_4 1295 720 5236 5812 C 576 89.58 1368 reject_low 4 ALIGNMENT 0 YS2-14g01.q1k vc_2 679 62 2146 2145 C 618 0.00 1368 reject_low 13 ALIGNMENT 0 YS2-14g01.q1k vc_7 719 62 2728 2727 C 658 0.00 1368 reject_low 3 ALIGNMENT 0 YS2-14g01.q1k vc_4 719 62 5813 5812 C 658 0.00 1368 reject_low 4 ALIGNMENT 0 YS2-14g01.q1k vc_3 679 62 2513 2512 C 618 0.00 1368 reject_low 14 ALIGNMENT 38 YS2-14g01.q1k vc_7 683 720 13525 13562 F 38 100.00 1368 reject_low 17 ALIGNMENT 41 YS2-14g01.q1k vc_7 929 880 6360 6411 C 50 96.00 1368|1,0 reject_low 10 ALIGNMENT 135 YS2-14g01.q1k vc_7 1183 928 4923 5172 C 256 86.72 1368|0,1 reject_low 10 ALIGNMENT 613 YS2-14g01.p1k chr10 31 671 206001 206642 F 641 99.38 672 accept_chi 1 ALIGNMENT 87 YS2-14g01.q1k vc_4 808 720 1446 1534 C 89 100.00 1368 reject_low 11 ALIGNMENT 615 YS2-14g01.q1k chr10 679 40 206001 206640 C 640 99.53 1368 accept_chi 0 ALIGNMENT 0 YS2-14g01.q1k vc_5 62 719 2398 2397 F 658 0.00 1368 reject_low 2 ALIGNMENT 0 YS2-14g01.q1k vc_4 62 679 5831 5830 F 618 0.00 1368 reject_low 9 ALIGNMENT 0 YS2-14g01.q1k vc_2 62 719 2164 2163 F 658 0.00 1368 reject_low 6 ALIGNMENT 0 YS2-14g01.q1k vc_4 871 809 1447 1446 C 63 0.00 1368 reject_low 11 ALIGNMENT 336 YS2-14g01.q1k vc_3 720 1183 2531 2990 F 464 92.46 1368 reject_low 7 ALIGNMENT 41 YS2-14g01.q1k vc_2 720 680 2105 2145 C 41 100.00 1368 reject_low 13 ALIGNMENT 369 YS2-14g01.q1k vc_5 720 1306 2398 2984 F 587 89.61 1368 reject_low 2 ALIGNMENT 336 YS2-14g01.q1k vc_1 720 1183 2531 2990 F 464 92.46 1368 reject_low 5 ALIGNMENT 0 YS2-14g01.q1k vc_5 681 62 37 36 C 620 0.00 1368 reject_low 18 ALIGNMENT 0 YS2-14g01.q1k vc_7 721 871 13562 13561 F 151 0.00 1368 reject_low 17 ALIGNMENT 0 YS2-14g01.q1k vc_4 62 719 126 125 F 658 0.00 1368 reject_low 8 ALIGNMENT 0 YS2-14g01.q1k vc_5 681 62 5064 5063 C 620 0.00 1368 reject_low 15 ALIGNMENT 0 YS2-14g01.q1k vc_7 62 682 63 62 F 621 0.00 1368 reject_low 16 ALIGNMENT 0 YS2-14g01.q1k vc_5 871 718 2 1 C 154 0.00 1368 reject_low 18 ALIGNMENT 41 YS2-14g01.q1k vc_4 680 720 5831 5871 F 41 100.00 1368 reject_low 9 ALIGNMENT 0 YS2-14g01.q1k vc_3 62 719 2531 2530 F 658 0.00 1368 reject_low 7 ALIGNMENT 0 YS2-14g01.q1k chr10 871 680 206002 206001 C 192 0.00 1368 accept_chi 0 ALIGNMENT 0 YS2-14g02.q1k vc_7 302 302 4700 4921 C 1 0.00 731 reject_vc 7 ALIGNMENT 412 YS2-14g02.p1k chr02 39 466 640221 640648 F 428 100.00 484 accept 0 ALIGNMENT 0 YS2-14g02.q1k vc_7 53 54 5172 6360 C 0 0.00 731 reject_vc 7 ALIGNMENT 0 YS2-14g02.q1k vc_4 237 62 113 112 C 176 0.00 731 reject_vc 9 ALIGNMENT 427 YS2-14g02.q1k vc_5 1 617 2556 3183 F 617 90.76 731 reject_vc 1 ALIGNMENT 55 YS2-14g02.q1k vc_4 238 302 1548 1614 F 65 96.92 731 reject_vc 8 ALIGNMENT 292 YS2-14g02.q1k vc_1 1 301 2689 2991 F 301 99.34 731 reject_vc 4 ALIGNMENT 357 YS2-14g02.q1k vc_4 417 1 5232 5654 C 417 96.16 731 reject_vc 3 ALIGNMENT 69 YS2-14g02.q1k vc_7 417 303 4583 4699 C 115 89.57 731 reject_vc 7 ALIGNMENT 424 YS2-14g02.q1k vc_7 607 1 1953 2569 C 607 90.94 731 reject_vc 2 ALIGNMENT 0 YS2-14g02.q1k vc_4 62 237 1548 1547 F 176 0.00 731 reject_vc 8 ALIGNMENT 237 YS2-14g02.q1k vc_7 301 53 4922 5172 C 249 98.80 731|0,1 reject_vc 7 ALIGNMENT 129 YS2-14g02.q1k vc_4 306 617 1879 2199 F 312 82.37 731 reject_vc 8 ALIGNMENT 0 YS2-14g02.p1k chr02 467 484 640648 640647 F 18 0.00 484 accept 0 ALIGNMENT 0 YS2-14g02.q1k vc_4 237 62 6340 6339 C 176 0.00 731 reject_vc 10 ALIGNMENT 292 YS2-14g02.q1k vc_2 1 301 2322 2624 F 301 99.34 731 reject_vc 5 ALIGNMENT 0 YS2-14g02.q1k vc_4 303 305 1615 1878 F 3 0.00 731 reject_vc 8 ALIGNMENT 51 YS2-14g02.q1k vc_7 54 3 6360 6411 C 52 100.00 731|1,0 reject_vc 7 ALIGNMENT 55 YS2-14g02.q1k vc_4 302 238 6273 6339 C 65 96.92 731 reject_vc 10 ALIGNMENT 292 YS2-14g02.q1k vc_3 1 301 2689 2991 F 301 99.34 731 reject_vc 6 ALIGNMENT 55 YS2-14g02.q1k vc_4 302 238 46 112 C 65 96.92 731 reject_vc 9 ALIGNMENT 41 YS2-14g03.q1k vc_3 830 790 2472 2512 C 41 100.00 1381 reject_low 14 ALIGNMENT 0 YS2-14g03.q1k vc_2 789 62 2146 2145 C 728 0.00 1381 reject_low 13 ALIGNMENT 0 YS2-14g03.q1k vc_5 914 831 5026 5025 C 84 0.00 1381 reject_low 15 ALIGNMENT 36 YS2-14g03.q1k vc_5 827 792 1 36 C 36 100.00 1381 reject_low 18 ALIGNMENT 0 YS2-14g03.q1k vc_1 789 62 2513 2512 C 728 0.00 1381 reject_low 12 ALIGNMENT 0 YS2-14g03.q1k vc_5 791 62 5064 5063 C 730 0.00 1381 reject_low 15 ALIGNMENT 41 YS2-14g03.q1k vc_1 830 790 2472 2512 C 41 100.00 1381 reject_low 12 ALIGNMENT 0 YS2-14g03.q1k vc_7 988 62 6412 6411 C 927 0.00 1381 reject_low 10 ALIGNMENT 0 YS2-14g03.q1k vc_7 831 914 13562 13561 F 84 0.00 1381 reject_low 17 ALIGNMENT 0 YS2-14g03.q1k vc_5 62 829 2398 2397 F 768 0.00 1381 reject_low 5 ALIGNMENT 706 YS2-14g03.q1k chr11 790 39 241340 242092 C 752 98.94 1381 accept_chi 0 ALIGNMENT 38 YS2-14g03.q1k vc_7 793 830 13525 13562 F 38 100.00 1381 reject_low 17 ALIGNMENT 0 YS2-14g03.q1k vc_7 62 792 13525 13524 F 731 0.00 1381 reject_low 17 ALIGNMENT 276 YS2-14g03.q1k vc_2 830 1206 2164 2556 F 377 92.84 1381 reject_low 3 ALIGNMENT 0 YS2-14g03.q1k chr11 914 791 241341 241340 C 124 0.00 1381 accept_chi 0 ALIGNMENT 0 YS2-14g03.q1k vc_3 914 831 2473 2472 C 84 0.00 1381 reject_low 14 ALIGNMENT 0 YS2-14g03.q1k vc_2 62 829 2164 2163 F 768 0.00 1381 reject_low 3 ALIGNMENT 0 YS2-14g03.q1k vc_3 789 62 2513 2512 C 728 0.00 1381 reject_low 14 ALIGNMENT 0 YS2-14g03.q1k vc_5 791 62 37 36 C 730 0.00 1381 reject_low 18 ALIGNMENT 0 YS2-14g03.q1k vc_4 829 62 1535 1534 C 768 0.00 1381 reject_low 11 ALIGNMENT 0 YS2-14g03.q1k vc_7 831 914 100 99 F 84 0.00 1381 reject_low 16 ALIGNMENT 0 YS2-14g03.q1k vc_7 829 62 2728 2727 C 768 0.00 1381 reject_low 6 ALIGNMENT 148 YS2-14g03.q1k vc_4 830 990 6353 6514 F 161 98.14 1381|1,0 reject_low 9 ALIGNMENT 39 YS2-14g03.q1k vc_5 830 792 5025 5063 C 39 100.00 1381 reject_low 15 ALIGNMENT 0 YS2-14g03.q1k vc_4 829 62 5813 5812 C 768 0.00 1381 reject_low 7 ALIGNMENT 0 YS2-14g03.q1k vc_7 62 792 63 62 F 731 0.00 1381 reject_low 16 ALIGNMENT 269 YS2-14g03.q1k vc_4 1206 830 5418 5812 C 377 92.31 1381 reject_low 7 ALIGNMENT 276 YS2-14g03.q1k vc_7 1206 830 2335 2727 C 377 92.84 1381 reject_low 6 ALIGNMENT 87 YS2-14g03.q1k vc_7 1206 1037 4990 5172 C 170 86.47 1381|0,1 reject_low 10 ALIGNMENT 41 YS2-14g03.q1k vc_4 790 830 5831 5871 F 41 100.00 1381 reject_low 9 ALIGNMENT 276 YS2-14g03.q1k vc_5 830 1206 2398 2790 F 377 92.84 1381 reject_low 5 ALIGNMENT 0 YS2-14g03.q1k vc_1 62 829 2531 2530 F 768 0.00 1381 reject_low 2 ALIGNMENT 148 YS2-14g03.q1k vc_4 830 990 126 287 F 161 98.14 1381 reject_low 8 ALIGNMENT 0 YS2-14g03.q1k vc_4 62 829 126 125 F 768 0.00 1381 reject_low 8 ALIGNMENT 0 YS2-14g03.q1k vc_4 831 830 5872 6353 F 0 0.00 1381 reject_low 9 ALIGNMENT 0 YS2-14g03.q1k vc_5 914 828 2 1 C 87 0.00 1381 reject_low 18 ALIGNMENT 0 YS2-14g03.p1k chr11 782 796 242092 242091 F 15 0.00 796 accept_chi 1 ALIGNMENT 0 YS2-14g03.q1k vc_7 1037 1038 5172 6360 C 0 0.00 1381 reject_low 10 ALIGNMENT 276 YS2-14g03.q1k vc_1 830 1206 2531 2923 F 377 92.84 1381 reject_low 2 ALIGNMENT 0 YS2-14g03.q1k vc_4 62 789 5831 5830 F 728 0.00 1381 reject_low 9 ALIGNMENT 38 YS2-14g03.q1k vc_7 793 830 63 100 F 38 100.00 1381 reject_low 16 ALIGNMENT 276 YS2-14g03.q1k vc_3 830 1206 2531 2923 F 377 92.84 1381 reject_low 4 ALIGNMENT 700 YS2-14g03.p1k chr11 32 781 241342 242092 F 750 98.80 796 accept_chi 1 ALIGNMENT 87 YS2-14g03.q1k vc_4 918 830 1446 1534 C 89 100.00 1381 reject_low 11 ALIGNMENT 41 YS2-14g03.q1k vc_2 830 790 2105 2145 C 41 100.00 1381 reject_low 13 ALIGNMENT 0 YS2-14g03.q1k vc_1 914 831 2473 2472 C 84 0.00 1381 reject_low 12 ALIGNMENT 0 YS2-14g03.q1k vc_3 62 829 2531 2530 F 768 0.00 1381 reject_low 4 ALIGNMENT 41 YS2-14g03.q1k vc_7 1038 989 6360 6411 C 50 96.00 1381|1,0 reject_low 10 ALIGNMENT 0 YS2-14g03.q1k vc_2 914 831 2106 2105 C 84 0.00 1381 reject_low 13 ALIGNMENT 1027 YS2-14g05.p1k chr07 37 1171 915784 916926 F 1135 97.53 1208 accept 0 ALIGNMENT 906 YS2-14g05.q1k chr07 1086 43 919000 920061 C 1044 96.93 1291 accept 0 ALIGNMENT 919 YS2-14g06.q1k chr04 1094 49 718966 720023 C 1046 97.04 1357 accept 0 ALIGNMENT 976 YS2-14g06.p1k chr04 31 1168 715428 716574 F 1138 95.87 1240 accept 0 ALIGNMENT 924 YS2-14g07.q1k chr04 1147 38 1488807 1489923 C 1110 96.49 1356 accept 0 ALIGNMENT 1003 YS2-14g07.p1k chr04 33 1239 1485539 1486750 F 1207 95.86 1338 accept 0 ALIGNMENT 38 YS2-14g08.q1k vc_7 334 371 13525 13562 F 38 100.00 371 reject_low 6 ALIGNMENT 39 YS2-14g08.q1k vc_5 371 333 5025 5063 C 39 100.00 371 reject_low 5 ALIGNMENT 40 YS2-14g08.q1k vc_1 371 332 2472 2511 C 40 100.00 371 reject_low 2 ALIGNMENT 40 YS2-14g08.q1k vc_3 371 332 2472 2511 C 40 100.00 371 reject_low 3 ALIGNMENT 0 YS2-14g08.q1k vc_7 62 333 13525 13524 F 272 0.00 371 reject_low 6 ALIGNMENT 0 YS2-14g08.q1k vc_1 331 62 2512 2511 C 270 0.00 371 reject_low 2 ALIGNMENT 36 YS2-14g08.q1k vc_5 368 333 1 36 C 36 100.00 371 reject_low 7 ALIGNMENT 0 YS2-14g08.q1k chr01 371 333 60300 60299 C 39 0.00 371 accept_chi 1 ALIGNMENT 0 YS2-14g08.q1k vc_3 331 62 2512 2511 C 270 0.00 371 reject_low 3 ALIGNMENT 0 YS2-14g08.q1k vc_5 332 62 5064 5063 C 271 0.00 371 reject_low 5 ALIGNMENT 0 YS2-14g08.q1k vc_4 62 331 5832 5831 F 270 0.00 371 reject_low 4 ALIGNMENT 295 YS2-14g08.p1k chr01 32 334 60299 60601 F 303 99.34 353 accept_chi 0 ALIGNMENT 290 YS2-14g08.q1k chr01 332 31 60299 60601 C 302 99.01 371 accept_chi 1 ALIGNMENT 0 YS2-14g08.p1k chr01 335 353 60601 60600 F 19 0.00 353 accept_chi 0 ALIGNMENT 40 YS2-14g08.q1k vc_4 332 371 5832 5871 F 40 100.00 371 reject_low 4 ALIGNMENT 0 YS2-14g08.q1k vc_5 332 62 37 36 C 271 0.00 371 reject_low 7 ALIGNMENT 0 YS2-14g09.p1k chr07 671 546 1083322 1083321 C 126 0.00 671 ambiguous_tel 7 ALIGNMENT 80 YS2-14g09.p1k chr16 100 277 7098 7275 F 178 84.27 671 ambiguous_tel 30 ALIGNMENT 0 YS2-14g09.q1k chr10 618 62 7456 7455 C 557 0.00 726 ambiguous_tel 21 ALIGNMENT 67 YS2-14g09.p1k chr03 100 277 973 1149 F 178 82.02 671|1,0 ambiguous_tel 20 ALIGNMENT 0 YS2-14g09.q1k chr14 167 62 7746 7745 C 106 0.00 726 ambiguous_tel 13 ALIGNMENT 108 YS2-14g09.q1k chr10 40 166 742448 742576 F 127 96.85 726 ambiguous_tel 5 ALIGNMENT 0 YS2-14g09.q1k chr13 167 62 6659 6658 C 106 0.00 726 ambiguous_tel 16 ALIGNMENT 0 YS2-14g09.q1k chr09 726 679 7412 7411 C 48 0.00 726 reject_low 35 ALIGNMENT 294 YS2-14g09.p1k chr09 543 100 438747 439190 C 444 90.77 671 ambiguous_tel 9 ALIGNMENT 0 YS2-14g09.p1k chr15 62 100 723 722 F 39 0.00 671 ambiguous_tel 31 ALIGNMENT 0 YS2-14g09.p1k chr16 278 671 7275 7274 F 394 0.00 671 ambiguous_tel 30 ALIGNMENT 92 YS2-14g09.p1k chr14 277 100 783226 783403 C 178 87.08 671 ambiguous_tel 27 ALIGNMENT 86 YS2-14g09.q1k chr09 614 434 7656 7836 C 181 85.08 726 reject_low 35 ALIGNMENT 265 YS2-14g09.q1k chr04 614 168 776 1221 C 447 88.59 726 ambiguous_tel 4 ALIGNMENT 0 YS2-14g09.p1k chr13 62 99 6219 6218 F 38 0.00 671 ambiguous_tel 18 ALIGNMENT 0 YS2-14g09.p1k chr16 62 99 7098 7097 F 38 0.00 671 ambiguous_tel 30 ALIGNMENT 0 YS2-14g09.q1k chr15 726 611 724 723 C 116 0.00 726 reject_low 32 ALIGNMENT 300 YS2-14g09.q1k chr07 166 614 1083321 1083768 F 449 91.09 726 ambiguous_tel 6 ALIGNMENT 255 YS2-14g09.p1k chr13 100 543 6219 6658 F 444 88.29 671 ambiguous_tel 18 ALIGNMENT 0 YS2-14g09.p1k chr06 62 99 5405 5404 F 38 0.00 671 ambiguous_tel 10 ALIGNMENT 45 YS2-14g09.q1k chr09 678 619 7411 7472 C 60 95.00 726 reject_low 35 ALIGNMENT 0 YS2-14g09.p1k chr14 544 671 7745 7744 F 128 0.00 671 ambiguous_tel 14 ALIGNMENT 0 YS2-14g09.p1k chr15 671 278 1083867 1083866 C 394 0.00 671 ambiguous_tel 29 ALIGNMENT 0 YS2-14g09.q1k chr13 726 615 6217 6216 C 112 0.00 726 ambiguous_tel 16 ALIGNMENT 0 YS2-14g09.q1k chr07 615 726 1083768 1083767 F 112 0.00 726 ambiguous_tel 6 ALIGNMENT 0 YS2-14g09.q1k chr06 167 62 5849 5848 C 106 0.00 726 ambiguous_tel 11 ALIGNMENT 0 YS2-14g09.q1k chr12 433 62 12138 12137 C 372 0.00 726 ambiguous_tel 24 ALIGNMENT 90 YS2-14g09.q1k chr12 434 612 1064226 1064404 F 179 86.03 726 reject_low 36 ALIGNMENT 276 YS2-14g09.p1k chr06 100 543 5405 5848 F 444 89.41 671 ambiguous_tel 10 ALIGNMENT 0 YS2-14g09.q1k chr14 62 433 783226 783225 F 372 0.00 726 ambiguous_tel 25 ALIGNMENT 0 YS2-14g09.p1k chr14 671 278 783227 783226 C 394 0.00 671 ambiguous_tel 27 ALIGNMENT 0 YS2-14g09.q1k chr10 615 726 744945 744944 F 112 0.00 726 ambiguous_tel 5 ALIGNMENT 506 YS2-14g09.q1k chr05 583 38 6376 6921 C 546 99.27 726 ambiguous_tel 0 ALIGNMENT 0 YS2-14g09.q1k chr09 62 167 438747 438746 F 106 0.00 726 ambiguous_tel 8 ALIGNMENT 0 YS2-14g09.q1k chr03 726 679 730 729 C 48 0.00 726 reject_low 37 ALIGNMENT 0 YS2-14g09.q1k chr09 433 62 7837 7836 C 372 0.00 726 reject_low 35 ALIGNMENT 92 YS2-14g09.p1k chr12 100 277 11960 12137 F 178 87.08 671 ambiguous_tel 26 ALIGNMENT 0 YS2-14g09.p1k chr07 278 671 833 832 F 394 0.00 671 ambiguous_tel 23 ALIGNMENT 0 YS2-14g09.p1k chr14 62 99 7303 7302 F 38 0.00 671 ambiguous_tel 14 ALIGNMENT 80 YS2-14g09.p1k chr15 277 100 1083866 1084043 C 178 84.27 671 ambiguous_tel 29 ALIGNMENT 0 YS2-14g09.q1k chr12 62 433 1064226 1064225 F 372 0.00 726 reject_low 36 ALIGNMENT 0 YS2-14g09.q1k chr07 433 62 834 833 C 372 0.00 726 ambiguous_tel 22 ALIGNMENT 0 YS2-14g09.p1k chr13 544 671 6658 6657 F 128 0.00 671 ambiguous_tel 18 ALIGNMENT 0 YS2-14g09.q1k chr10 726 679 7395 7394 C 48 0.00 726 ambiguous_tel 21 ALIGNMENT 95 YS2-14g09.q1k chr14 434 614 783226 783406 F 181 87.29 726 ambiguous_tel 25 ALIGNMENT 0 YS2-14g09.p1k chr04 62 99 779 778 F 38 0.00 671 ambiguous_tel 2 ALIGNMENT 116 YS2-14g09.q1k chr07 614 434 653 833 C 181 90.61 726 ambiguous_tel 22 ALIGNMENT 0 YS2-14g09.q1k chr09 618 615 7473 7655 C 4 0.00 726 reject_low 35 ALIGNMENT 0 YS2-14g09.p1k chr02 671 544 812060 812059 C 128 0.00 671 ambiguous_tel 17 ALIGNMENT 0 YS2-14g09.q1k chr04 167 167 1222 3139 C 1 0.00 726 ambiguous_tel 4 ALIGNMENT 0 YS2-14g09.q1k chr10 167 167 742577 744499 F 1 0.00 726 ambiguous_tel 5 ALIGNMENT 0 YS2-14g09.q1k chr08 618 612 5191 5378 C 7 0.00 726 ambiguous_tel 19 ALIGNMENT 0 YS2-14g09.q1k chr16 726 687 6846 6845 C 40 0.00 726 reject_low 34 ALIGNMENT 276 YS2-14g09.q1k chr06 611 168 5405 5848 C 444 89.41 726 ambiguous_tel 11 ALIGNMENT 0 YS2-14g09.p1k chr07 99 62 1083766 1083765 C 38 0.00 671 ambiguous_tel 7 ALIGNMENT 0 YS2-14g09.q1k chr05 726 584 6377 6376 C 143 0.00 726 ambiguous_tel 0 ALIGNMENT 255 YS2-14g09.p1k chr02 543 100 812059 812498 C 444 88.29 671 ambiguous_tel 17 ALIGNMENT 0 YS2-14g09.p1k chr08 62 99 5379 5378 F 38 0.00 671 ambiguous_tel 12 ALIGNMENT 0 YS2-14g09.q1k chr02 62 167 812059 812058 F 106 0.00 726 ambiguous_tel 15 ALIGNMENT 297 YS2-14g09.p1k chr07 545 100 1083321 1083765 C 446 91.03 671 ambiguous_tel 7 ALIGNMENT 45 YS2-14g09.q1k chr10 678 619 7394 7455 C 60 95.00 726 ambiguous_tel 21 ALIGNMENT 0 YS2-14g09.p1k chr08 544 671 5820 5819 F 128 0.00 671 ambiguous_tel 12 ALIGNMENT 265 YS2-14g09.q1k chr14 614 168 7300 7745 C 447 88.59 726 ambiguous_tel 13 ALIGNMENT 0 YS2-14g09.q1k chr16 613 614 6920 7095 C 0 0.00 726 reject_low 34 ALIGNMENT 0 YS2-14g09.p1k chr15 99 62 1084044 1084043 C 38 0.00 671 ambiguous_tel 29 ALIGNMENT 0 YS2-14g09.q1k chr12 613 618 1064405 1064591 F 6 0.00 726 reject_low 36 ALIGNMENT 70 YS2-14g09.p1k chr15 101 277 723 898 F 177 83.05 671 ambiguous_tel 31 ALIGNMENT 0 YS2-14g09.q1k chr14 615 726 783406 783405 F 112 0.00 726 ambiguous_tel 25 ALIGNMENT 0 YS2-14g09.p1k chr10 544 544 742577 744499 C 1 0.00 671 ambiguous_tel 3 ALIGNMENT 0 YS2-14g09.q1k chr08 726 683 5125 5124 C 44 0.00 726 ambiguous_tel 19 ALIGNMENT 0 YS2-14g09.p1k chr09 278 671 7836 7835 F 394 0.00 671 ambiguous_tel 28 ALIGNMENT 0 YS2-14g09.q1k chr08 167 62 5821 5820 C 106 0.00 726 ambiguous_tel 19 ALIGNMENT 0 YS2-14g09.q1k chr03 613 614 797 970 C 0 0.00 726 reject_low 37 ALIGNMENT 58 YS2-14g09.p1k chr13 229 100 923535 923662 C 130 85.38 671 reject_low 33 ALIGNMENT 0 YS2-14g09.p1k chr06 544 671 5848 5847 F 128 0.00 671 ambiguous_tel 10 ALIGNMENT 262 YS2-14g09.p1k chr10 543 100 744500 744942 C 444 88.51 671 ambiguous_tel 3 ALIGNMENT 35 YS2-14g09.q1k chr08 682 619 5124 5190 C 64 87.50 726 ambiguous_tel 19 ALIGNMENT 0 YS2-14g09.p1k chr07 62 99 656 655 F 38 0.00 671 ambiguous_tel 23 ALIGNMENT 111 YS2-14g09.p1k chr04 545 671 3140 3268 F 127 97.64 671 ambiguous_tel 2 ALIGNMENT 0 YS2-14g09.p1k chr02 99 62 812499 812498 C 38 0.00 671 ambiguous_tel 17 ALIGNMENT 262 YS2-14g09.p1k chr14 100 543 7303 7745 F 444 88.51 671 ambiguous_tel 14 ALIGNMENT 0 YS2-14g09.q1k chr03 433 62 1150 1149 C 372 0.00 726 reject_low 37 ALIGNMENT 69 YS2-14g09.q1k chr03 614 434 970 1149 C 181 82.32 726|1,0 reject_low 37 ALIGNMENT 41 YS2-14g09.q1k chr03 678 612 729 798 C 67 91.04 726|0,2 reject_low 37 ALIGNMENT 44 YS2-14g09.q1k chr16 686 612 6845 6921 C 75 88.00 726|0,2 reject_low 34 ALIGNMENT 0 YS2-14g09.p1k chr15 278 671 898 897 F 394 0.00 671 ambiguous_tel 31 ALIGNMENT 0 YS2-14g09.q1k chr16 433 62 7276 7275 C 372 0.00 726 reject_low 34 ALIGNMENT 0 YS2-14g09.p1k chr10 99 62 744943 744942 C 38 0.00 671 ambiguous_tel 3 ALIGNMENT 0 YS2-14g09.p1k chr03 101 100 801 973 F 0 0.00 671 ambiguous_tel 20 ALIGNMENT 111 YS2-14g09.p1k chr10 671 545 742448 742576 C 127 97.64 671 ambiguous_tel 3 ALIGNMENT 0 YS2-14g09.p1k chr13 671 230 923536 923535 C 442 0.00 671 reject_low 33 ALIGNMENT 113 YS2-14g09.p1k chr07 100 277 656 833 F 178 90.45 671 ambiguous_tel 23 ALIGNMENT 0 YS2-14g09.p1k chr04 544 544 1222 3139 F 1 0.00 671 ambiguous_tel 2 ALIGNMENT 265 YS2-14g09.q1k chr10 168 614 744500 744945 F 447 88.59 726 ambiguous_tel 5 ALIGNMENT 0 YS2-14g09.q1k chr15 433 62 899 898 C 372 0.00 726 reject_low 32 ALIGNMENT 0 YS2-14g09.q1k chr07 726 615 654 653 C 112 0.00 726 ambiguous_tel 22 ALIGNMENT 0 YS2-14g09.q1k chr04 726 615 777 776 C 112 0.00 726 ambiguous_tel 4 ALIGNMENT 0 YS2-14g09.p1k chr03 278 671 1149 1148 F 394 0.00 671 ambiguous_tel 20 ALIGNMENT 32 YS2-14g09.p1k chr03 32 101 729 801 F 70 84.29 671|0,1 ambiguous_tel 20 ALIGNMENT 0 YS2-14g09.q1k chr02 615 726 812501 812500 F 112 0.00 726 ambiguous_tel 15 ALIGNMENT 0 YS2-14g09.p1k chr12 62 99 11960 11959 F 38 0.00 671 ambiguous_tel 26 ALIGNMENT 0 YS2-14g09.q1k chr09 615 726 439193 439192 F 112 0.00 726 ambiguous_tel 8 ALIGNMENT 95 YS2-14g09.q1k chr12 614 434 11957 12137 C 181 87.29 726 ambiguous_tel 24 ALIGNMENT 83 YS2-14g09.p1k chr09 100 277 7659 7836 F 178 84.83 671 ambiguous_tel 28 ALIGNMENT 262 YS2-14g09.p1k chr04 100 543 779 1221 F 444 88.51 671 ambiguous_tel 2 ALIGNMENT 0 YS2-14g09.p1k chr12 278 671 12137 12136 F 394 0.00 671 ambiguous_tel 26 ALIGNMENT 0 YS2-14g09.q1k chr12 679 726 1064653 1064652 F 48 0.00 726 reject_low 36 ALIGNMENT 0 YS2-14g09.p1k chr09 62 99 7659 7658 F 38 0.00 671 ambiguous_tel 28 ALIGNMENT 70 YS2-14g09.q1k chr15 610 434 723 898 C 177 83.05 726 reject_low 32 ALIGNMENT 258 YS2-14g09.q1k chr13 614 168 6216 6658 C 447 88.37 726 ambiguous_tel 16 ALIGNMENT 83 YS2-14g09.q1k chr16 614 434 7095 7275 C 181 84.53 726|1,0 reject_low 34 ALIGNMENT 270 YS2-14g09.p1k chr08 100 543 5379 5820 F 444 89.19 671 ambiguous_tel 12 ALIGNMENT 0 YS2-14g09.p1k chr09 671 544 438748 438747 C 128 0.00 671 ambiguous_tel 9 ALIGNMENT 0 YS2-14g09.p1k chr05 62 127 6376 6375 F 66 0.00 671 ambiguous_tel 1 ALIGNMENT 42 YS2-14g09.q1k chr12 619 678 1064592 1064653 F 60 93.33 726 reject_low 36 ALIGNMENT 0 YS2-14g09.p1k chr09 99 62 439191 439190 C 38 0.00 671 ambiguous_tel 9 ALIGNMENT 0 YS2-14g09.q1k chr06 726 612 5406 5405 C 115 0.00 726 ambiguous_tel 11 ALIGNMENT 0 YS2-14g09.q1k chr14 726 615 7301 7300 C 112 0.00 726 ambiguous_tel 13 ALIGNMENT 0 YS2-14g09.p1k chr13 99 62 923663 923662 C 38 0.00 671 reject_low 33 ALIGNMENT 506 YS2-14g09.p1k chr05 128 671 6376 6919 F 544 99.45 671 ambiguous_tel 1 ALIGNMENT 258 YS2-14g09.q1k chr02 168 614 812059 812501 F 447 88.37 726 ambiguous_tel 15 ALIGNMENT 270 YS2-14g09.q1k chr08 611 168 5379 5820 C 444 89.19 726 ambiguous_tel 19 ALIGNMENT 0 YS2-14g09.q1k chr07 62 165 1083321 1083320 F 104 0.00 726 ambiguous_tel 6 ALIGNMENT 0 YS2-14g09.p1k chr14 99 62 783404 783403 C 38 0.00 671 ambiguous_tel 27 ALIGNMENT 297 YS2-14g09.q1k chr09 168 614 438747 439193 F 447 90.83 726 ambiguous_tel 8 ALIGNMENT 0 YS2-14g09.q1k chr12 726 615 11958 11957 C 112 0.00 726 ambiguous_tel 24 ALIGNMENT 108 YS2-14g09.q1k chr04 166 40 3140 3268 C 127 96.85 726 ambiguous_tel 4 ALIGNMENT 163 YS2-14g10.p1k chr10 31 213 663769 663951 F 183 98.91 232 accept 0 ALIGNMENT 0 YS2-14g10.p1k chr10 214 232 663951 663950 F 19 0.00 232 accept 0 ALIGNMENT 41 YS2-14g11.q1k vc_4 753 793 5831 5871 F 41 100.00 1394 reject_low 9 ALIGNMENT 0 YS2-14g11.q1k vc_1 882 794 2473 2472 C 89 0.00 1394 reject_low 12 ALIGNMENT 0 YS2-14g11.q1k vc_4 792 62 5813 5812 C 731 0.00 1394 reject_low 4 ALIGNMENT 0 YS2-14g11.q1k vc_1 62 792 2531 2530 F 731 0.00 1394 reject_low 5 ALIGNMENT 0 YS2-14g11.q1k vc_7 951 62 6412 6411 C 890 0.00 1394 reject_low 11 ALIGNMENT 315 YS2-14g11.q1k vc_4 1267 793 5331 5812 C 475 89.47 1394 reject_low 4 ALIGNMENT 0 YS2-14g11.q1k vc_7 794 882 100 99 F 89 0.00 1394 reject_low 16 ALIGNMENT 0 YS2-14g11.q1k vc_7 794 882 13562 13561 F 89 0.00 1394 reject_low 17 ALIGNMENT 0 YS2-14g11.q1k vc_2 752 62 2146 2145 C 691 0.00 1394 reject_low 13 ALIGNMENT 36 YS2-14g11.q1k vc_5 790 755 1 36 C 36 100.00 1394 reject_low 18 ALIGNMENT 660 YS2-14g11.p1k chr04 29 735 317039 317749 F 707 98.73 735 accept_chi 1 ALIGNMENT 0 YS2-14g11.q1k vc_4 62 752 5831 5830 F 691 0.00 1394 reject_low 9 ALIGNMENT 319 YS2-14g11.q1k vc_1 793 1245 2531 2987 F 453 90.73 1394 reject_low 5 ALIGNMENT 0 YS2-14g11.q1k vc_5 754 62 5064 5063 C 693 0.00 1394 reject_low 15 ALIGNMENT 0 YS2-14g11.q1k vc_2 62 792 2164 2163 F 731 0.00 1394 reject_low 6 ALIGNMENT 0 YS2-14g11.q1k vc_3 882 794 2473 2472 C 89 0.00 1394 reject_low 14 ALIGNMENT 0 YS2-14g11.q1k vc_7 62 755 63 62 F 694 0.00 1394 reject_low 16 ALIGNMENT 0 YS2-14g11.q1k vc_7 792 62 2728 2727 C 731 0.00 1394 reject_low 2 ALIGNMENT 38 YS2-14g11.q1k vc_7 756 793 13525 13562 F 38 100.00 1394 reject_low 17 ALIGNMENT 0 YS2-14g11.q1k vc_4 62 792 126 125 F 731 0.00 1394 reject_low 8 ALIGNMENT 117 YS2-14g11.q1k vc_7 1245 1002 4926 5172 C 244 83.61 1394|0,1 reject_low 11 ALIGNMENT 0 YS2-14g11.q1k vc_7 62 755 13525 13524 F 694 0.00 1394 reject_low 17 ALIGNMENT 0 YS2-14g11.q1k chr04 882 754 317037 317036 C 129 0.00 1394 accept_chi 0 ALIGNMENT 152 YS2-14g11.q1k vc_4 793 953 6353 6514 F 161 98.76 1394|1,0 reject_low 9 ALIGNMENT 319 YS2-14g11.q1k vc_2 793 1245 2164 2620 F 453 90.73 1394 reject_low 6 ALIGNMENT 0 YS2-14g11.q1k vc_5 62 792 2398 2397 F 731 0.00 1394 reject_low 3 ALIGNMENT 322 YS2-14g11.q1k vc_5 793 1265 2398 2876 F 473 90.06 1394 reject_low 3 ALIGNMENT 50 YS2-14g11.q1k vc_7 1003 952 6360 6411 C 52 98.08 1394|1,0 reject_low 11 ALIGNMENT 0 YS2-14g11.q1k vc_3 752 62 2513 2512 C 691 0.00 1394 reject_low 14 ALIGNMENT 685 YS2-14g11.q1k chr04 753 39 317036 317749 C 715 99.58 1394 accept_chi 0 ALIGNMENT 41 YS2-14g11.q1k vc_2 793 753 2105 2145 C 41 100.00 1394 reject_low 13 ALIGNMENT 0 YS2-14g11.q1k vc_4 794 793 5872 6353 F 0 0.00 1394 reject_low 9 ALIGNMENT 319 YS2-14g11.q1k vc_3 793 1245 2531 2987 F 453 90.73 1394 reject_low 7 ALIGNMENT 41 YS2-14g11.q1k vc_1 793 753 2472 2512 C 41 100.00 1394 reject_low 12 ALIGNMENT 0 YS2-14g11.q1k vc_5 882 791 2 1 C 92 0.00 1394 reject_low 18 ALIGNMENT 0 YS2-14g11.q1k vc_5 754 62 37 36 C 693 0.00 1394 reject_low 18 ALIGNMENT 152 YS2-14g11.q1k vc_4 793 953 126 287 F 161 98.76 1394 reject_low 8 ALIGNMENT 0 YS2-14g11.q1k vc_1 752 62 2513 2512 C 691 0.00 1394 reject_low 12 ALIGNMENT 322 YS2-14g11.q1k vc_7 1267 793 2248 2727 C 475 89.89 1394 reject_low 2 ALIGNMENT 38 YS2-14g11.q1k vc_7 756 793 63 100 F 38 100.00 1394 reject_low 16 ALIGNMENT 39 YS2-14g11.q1k vc_5 793 755 5025 5063 C 39 100.00 1394 reject_low 15 ALIGNMENT 0 YS2-14g11.q1k vc_5 882 794 5026 5025 C 89 0.00 1394 reject_low 15 ALIGNMENT 0 YS2-14g11.q1k vc_4 792 62 1535 1534 C 731 0.00 1394 reject_low 10 ALIGNMENT 0 YS2-14g11.q1k vc_2 882 794 2106 2105 C 89 0.00 1394 reject_low 13 ALIGNMENT 0 YS2-14g11.q1k vc_7 1002 1003 5172 6360 C 0 0.00 1394 reject_low 11 ALIGNMENT 87 YS2-14g11.q1k vc_4 881 793 1446 1534 C 89 100.00 1394 reject_low 10 ALIGNMENT 0 YS2-14g11.q1k vc_3 62 792 2531 2530 F 731 0.00 1394 reject_low 7 ALIGNMENT 41 YS2-14g11.q1k vc_3 793 753 2472 2512 C 41 100.00 1394 reject_low 14 ALIGNMENT 962 YS2-14g12.p1k chr16 30 1174 513055 514214 F 1145 95.90 1367 accept 0 ALIGNMENT 905 YS2-14g12.q1k chr16 1059 39 514886 515922 C 1021 97.45 1341 accept 0 ALIGNMENT 0 YS2-14g13.q1k vc_5 161 62 5068 5067 C 100 0.00 204 reject_low 5 ALIGNMENT 40 YS2-14g13.q1k vc_5 204 162 5025 5067 C 43 97.67 204 reject_low 5 ALIGNMENT 0 YS2-14g13.q1k vc_1 163 62 2513 2512 C 102 0.00 204 reject_low 1 ALIGNMENT 37 YS2-14g13.q1k vc_5 201 162 1 40 C 40 97.50 204 reject_low 7 ALIGNMENT 0 YS2-14g13.q1k vc_4 62 163 5831 5830 F 102 0.00 204 reject_low 4 ALIGNMENT 104 YS2-14g13.q1k chr16 39 164 353553 353678 F 126 96.03 204 accept 0 ALIGNMENT 41 YS2-14g13.q1k vc_2 204 164 2105 2145 C 41 100.00 204 reject_low 2 ALIGNMENT 41 YS2-14g13.q1k vc_4 164 204 5831 5871 F 41 100.00 204 reject_low 4 ALIGNMENT 0 YS2-14g13.q1k chr16 165 204 353678 353677 F 40 0.00 204 accept 0 ALIGNMENT 0 YS2-14g13.q1k vc_7 62 166 13525 13524 F 105 0.00 204 reject_low 6 ALIGNMENT 41 YS2-14g13.q1k vc_1 204 164 2472 2512 C 41 100.00 204 reject_low 1 ALIGNMENT 38 YS2-14g13.q1k vc_7 167 204 13525 13562 F 38 100.00 204 reject_low 6 ALIGNMENT 41 YS2-14g13.q1k vc_3 204 164 2472 2512 C 41 100.00 204 reject_low 3 ALIGNMENT 0 YS2-14g13.q1k vc_5 161 62 41 40 C 100 0.00 204 reject_low 7 ALIGNMENT 0 YS2-14g13.q1k vc_3 163 62 2513 2512 C 102 0.00 204 reject_low 3 ALIGNMENT 0 YS2-14g13.q1k vc_2 163 62 2146 2145 C 102 0.00 204 reject_low 2 ALIGNMENT 1039 YS2-14g14.p1k chr09 38 1251 131238 132463 F 1214 95.39 1464 accept 0 ALIGNMENT 0 YS2-14g14.q1k chr09 231 232 136233 136501 C 0 0.00 1340 accept 0 ALIGNMENT 716 YS2-14g14.q1k chr09 1086 227 135361 136237 C 860 95.93 1340|0,5 accept 0 ALIGNMENT 174 YS2-14g14.q1k chr09 235 42 136498 136691 C 194 99.48 1340|4,0 accept 0 ALIGNMENT 39 YS2-14g15.q1k vc_5 947 909 5025 5063 C 39 100.00 1330 reject_low 21 ALIGNMENT 0 YS2-14g15.p1k vc_5 919 62 5026 5025 C 858 0.00 1392 reject_low 2 ALIGNMENT 0 YS2-14g15.p1k vc_1 919 62 2473 2472 C 858 0.00 1392 reject_low 16 ALIGNMENT 0 YS2-14g15.q1k vc_4 946 98 5813 5812 C 849 0.00 1330 reject_low 12 ALIGNMENT 0 YS2-14g15.p1k vc_3 919 62 2473 2472 C 858 0.00 1392 reject_low 17 ALIGNMENT 150 YS2-14g15.p1k vc_4 920 1223 5871 6189 F 304 85.86 1392 reject_low 7 ALIGNMENT 0 YS2-14g15.q1k vc_4 98 946 126 125 F 849 0.00 1330 reject_low 13 ALIGNMENT 38 YS2-14g15.q1k vc_7 910 947 13525 13562 F 38 100.00 1330 reject_low 22 ALIGNMENT 0 YS2-14g15.q1k vc_1 98 946 2531 2530 F 849 0.00 1330 reject_low 9 ALIGNMENT 0 YS2-14g15.p1k vc_4 62 919 5871 5870 F 858 0.00 1392 reject_low 7 ALIGNMENT 0 YS2-14g15.p1k vc_1 919 62 2106 2105 C 858 0.00 1392 reject_low 4 ALIGNMENT 150 YS2-14g15.p1k vc_2 1223 920 1787 2105 C 304 85.53 1392 reject_low 5 ALIGNMENT 0 YS2-14g15.p1k vc_7 62 919 13562 13561 F 858 0.00 1392 reject_low 8 ALIGNMENT 0 YS2-14g15.q1k vc_4 948 947 5872 6353 F 0 0.00 1330 reject_low 14 ALIGNMENT 0 YS2-14g15.p1k vc_7 62 919 100 99 F 858 0.00 1392 reject_low 3 ALIGNMENT 80 YS2-14g15.q1k vc_4 947 1093 6353 6513 F 147 88.44 1330|1,0 reject_low 14 ALIGNMENT 0 YS2-14g15.p1k vc_2 919 62 2106 2105 C 858 0.00 1392 reject_low 5 ALIGNMENT 41 YS2-14g15.q1k vc_3 947 907 2472 2512 C 41 100.00 1330 reject_low 20 ALIGNMENT 150 YS2-14g15.p1k vc_3 1223 920 1787 2105 C 304 85.53 1392 reject_low 6 ALIGNMENT 36 YS2-14g15.q1k vc_5 944 909 1 36 C 36 100.00 1330 reject_low 23 ALIGNMENT 83 YS2-14g15.q1k vc_3 947 1100 2531 2699 F 154 88.31 1330 reject_low 11 ALIGNMENT 80 YS2-14g15.q1k vc_4 947 1093 126 286 F 147 88.44 1330 reject_low 13 ALIGNMENT 150 YS2-14g15.p1k vc_1 1223 920 1787 2105 C 304 85.53 1392 reject_low 4 ALIGNMENT 41 YS2-14g15.q1k vc_2 947 907 2105 2145 C 41 100.00 1330 reject_low 19 ALIGNMENT 0 YS2-14g15.q1k vc_4 98 906 5831 5830 F 809 0.00 1330 reject_low 14 ALIGNMENT 26 YS2-14g15.p1k vc_1 950 920 2441 2472 C 31 96.77 1392 reject_low 16 ALIGNMENT 41 YS2-14g15.q1k vc_4 907 947 5831 5871 F 41 100.00 1330 reject_low 14 ALIGNMENT 0 YS2-14g15.p1k vc_3 919 62 2106 2105 C 858 0.00 1392 reject_low 6 ALIGNMENT 0 YS2-14g15.q1k vc_7 946 98 2728 2727 C 849 0.00 1330 reject_low 3 ALIGNMENT 831 YS2-14g15.q1k chr15 41 906 268858 269721 F 866 99.31 1330 accept_chi 1 ALIGNMENT 0 YS2-14g15.q1k vc_7 98 909 13525 13524 F 812 0.00 1330 reject_low 22 ALIGNMENT 26 YS2-14g15.p1k vc_3 950 920 2441 2472 C 31 96.77 1392 reject_low 17 ALIGNMENT 0 YS2-14g15.q1k vc_5 908 98 37 36 C 811 0.00 1330 reject_low 23 ALIGNMENT 0 YS2-14g15.q1k vc_5 98 946 2398 2397 F 849 0.00 1330 reject_low 2 ALIGNMENT 0 YS2-14g15.q1k vc_5 908 98 5064 5063 C 811 0.00 1330 reject_low 21 ALIGNMENT 0 YS2-14g15.q1k vc_4 946 98 1535 1534 C 849 0.00 1330 reject_low 15 ALIGNMENT 832 YS2-14g15.p1k chr15 901 38 268858 269721 C 864 99.19 1392 accept_chi 0 ALIGNMENT 0 YS2-14g15.q1k vc_3 906 98 2513 2512 C 809 0.00 1330 reject_low 20 ALIGNMENT 0 YS2-14g15.q1k vc_2 98 946 2164 2163 F 849 0.00 1330 reject_low 10 ALIGNMENT 150 YS2-14g15.p1k vc_5 1223 920 4707 5025 C 304 85.53 1392 reject_low 2 ALIGNMENT 0 YS2-14g15.q1k vc_3 98 946 2531 2530 F 849 0.00 1330 reject_low 11 ALIGNMENT 49 YS2-14g15.q1k vc_4 1028 947 1446 1534 C 82 90.24 1330 reject_low 15 ALIGNMENT 83 YS2-14g15.q1k vc_2 947 1100 2164 2332 F 154 88.31 1330 reject_low 10 ALIGNMENT 83 YS2-14g15.q1k vc_7 1100 947 2559 2727 C 154 88.31 1330 reject_low 3 ALIGNMENT 83 YS2-14g15.q1k vc_5 947 1100 2398 2566 F 154 88.31 1330 reject_low 2 ALIGNMENT 83 YS2-14g15.q1k vc_4 1100 947 5644 5812 C 154 88.31 1330 reject_low 12 ALIGNMENT 0 YS2-14g15.q1k vc_2 906 98 2146 2145 C 809 0.00 1330 reject_low 19 ALIGNMENT 150 YS2-14g15.p1k vc_7 920 1223 100 418 F 304 85.86 1392 reject_low 3 ALIGNMENT 41 YS2-14g15.q1k vc_1 947 907 2472 2512 C 41 100.00 1330 reject_low 18 ALIGNMENT 150 YS2-14g15.p1k vc_7 920 1223 13562 13880 F 304 85.86 1392 reject_low 8 ALIGNMENT 0 YS2-14g15.q1k vc_1 906 98 2513 2512 C 809 0.00 1330 reject_low 18 ALIGNMENT 83 YS2-14g15.q1k vc_1 947 1100 2531 2699 F 154 88.31 1330 reject_low 9 ALIGNMENT 932 YS2-14g16.p1k chr04 35 1079 728348 729402 F 1045 97.70 1375 accept_chi 0 ALIGNMENT 868 YS2-14g16.q1k chr12 992 41 271391 272354 C 952 98.11 1276 accept_chi 1 ALIGNMENT 965 YS2-14g17.q1k chr15 40 1237 269806 270992 F 1198 95.33 1358 accept 0 ALIGNMENT 919 YS2-14g17.p1k chr15 1108 34 273172 274240 C 1075 96.00 1227 accept 0 ALIGNMENT 38 YS2-14g20.q1k vc_7 225 262 13525 13562 F 38 100.00 262 reject_low 6 ALIGNMENT 39 YS2-14g20.q1k vc_5 262 224 5025 5063 C 39 100.00 262 reject_low 5 ALIGNMENT 42 YS2-14g20.q1k vc_1 262 221 2472 2513 C 42 100.00 262 reject_low 2 ALIGNMENT 0 YS2-14g20.q1k vc_7 62 224 13525 13524 F 163 0.00 262 reject_low 6 ALIGNMENT 172 YS2-14g20.p1k chr03 34 221 137673 137858 F 188 98.40 239 accept_chi 1 ALIGNMENT 42 YS2-14g20.q1k vc_4 221 262 5830 5871 F 42 100.00 262 reject_low 4 ALIGNMENT 0 YS2-14g20.q1k vc_1 220 62 2514 2513 C 159 0.00 262 reject_low 2 ALIGNMENT 0 YS2-14g20.q1k vc_5 223 62 37 36 C 162 0.00 262 reject_low 7 ALIGNMENT 0 YS2-14g20.q1k chr03 262 222 137674 137673 C 41 0.00 262 accept_chi 0 ALIGNMENT 42 YS2-14g20.q1k vc_3 262 221 2472 2513 C 42 100.00 262 reject_low 3 ALIGNMENT 0 YS2-14g20.q1k vc_4 62 220 5830 5829 F 159 0.00 262 reject_low 4 ALIGNMENT 180 YS2-14g20.q1k chr03 221 36 137673 137858 C 186 100.00 262 accept_chi 0 ALIGNMENT 0 YS2-14g20.q1k vc_5 223 62 5064 5063 C 162 0.00 262 reject_low 5 ALIGNMENT 36 YS2-14g20.q1k vc_5 259 224 1 36 C 36 100.00 262 reject_low 7 ALIGNMENT 0 YS2-14g20.p1k chr03 222 239 137858 137857 F 18 0.00 239 accept_chi 1 ALIGNMENT 0 YS2-14g20.q1k vc_3 220 62 2514 2513 C 159 0.00 262 reject_low 3 ALIGNMENT 0 YS2-14g21.q1k chr01 271 231 79679 79678 C 41 0.00 271 accept_chi 1 ALIGNMENT 184 YS2-14g21.q1k chr01 230 41 79678 79867 C 190 99.47 271 accept_chi 1 ALIGNMENT 0 YS2-14g21.q1k vc_7 62 233 13525 13524 F 172 0.00 271 reject_low 8 ALIGNMENT 41 YS2-14g21.q1k vc_3 271 231 2472 2512 C 41 100.00 271 reject_low 5 ALIGNMENT 0 YS2-14g21.q1k vc_5 223 62 5072 5071 C 162 0.00 271 reject_low 2 ALIGNMENT 0 YS2-14g21.q1k vc_3 230 62 2513 2512 C 169 0.00 271 reject_low 5 ALIGNMENT 181 YS2-14g21.p1k chr01 32 221 79678 79867 F 190 98.95 239 accept_chi 0 ALIGNMENT 0 YS2-14g21.q1k vc_4 62 230 5831 5830 F 169 0.00 271 reject_low 6 ALIGNMENT 41 YS2-14g21.q1k vc_1 271 231 2472 2512 C 41 100.00 271 reject_low 3 ALIGNMENT 41 YS2-14g21.q1k vc_2 271 231 2105 2145 C 41 100.00 271 reject_low 4 ALIGNMENT 0 YS2-14g21.p1k chr01 222 239 79867 79866 F 18 0.00 239 accept_chi 0 ALIGNMENT 37 YS2-14g21.q1k vc_5 268 224 1 44 C 45 95.56 271 reject_low 7 ALIGNMENT 0 YS2-14g21.q1k vc_5 223 62 45 44 C 162 0.00 271 reject_low 7 ALIGNMENT 41 YS2-14g21.q1k vc_4 231 271 5831 5871 F 41 100.00 271 reject_low 6 ALIGNMENT 0 YS2-14g21.q1k vc_2 230 62 2146 2145 C 169 0.00 271 reject_low 4 ALIGNMENT 0 YS2-14g21.q1k vc_1 230 62 2513 2512 C 169 0.00 271 reject_low 3 ALIGNMENT 40 YS2-14g21.q1k vc_5 271 224 5025 5071 C 48 95.83 271 reject_low 2 ALIGNMENT 38 YS2-14g21.q1k vc_7 234 271 13525 13562 F 38 100.00 271 reject_low 8 ALIGNMENT 288 YS2-14g22.p1k chr12 421 36 460452 460850 C 386 93.78 439 accept 0 ALIGNMENT 191 YS2-14g22.p1k chr12 317 36 451419 451713 C 282 91.84 439 reject_low 2 ALIGNMENT 0 YS2-14g22.p1k chr12 439 422 460453 460452 C 18 0.00 439 accept 0 ALIGNMENT 0 YS2-14g22.q1k vc_1 412 62 2513 2512 C 351 0.00 453 reject_low 3 ALIGNMENT 0 YS2-14g22.p1k chr12 439 318 451420 451419 C 122 0.00 439 reject_low 2 ALIGNMENT 38 YS2-14g22.q1k vc_7 416 453 13525 13562 F 38 100.00 453 reject_low 6 ALIGNMENT 197 YS2-14g22.q1k chr12 132 413 451419 451713 F 282 92.55 453 accept 0 ALIGNMENT 41 YS2-14g22.q1k vc_1 453 413 2472 2512 C 41 100.00 453 reject_low 3 ALIGNMENT 41 YS2-14g22.q1k vc_4 413 453 5831 5871 F 41 100.00 453 reject_low 5 ALIGNMENT 41 YS2-14g22.q1k vc_3 453 413 2472 2512 C 41 100.00 453 reject_low 4 ALIGNMENT 0 YS2-14g22.q1k chr12 414 453 451713 451712 F 40 0.00 453 accept 0 ALIGNMENT 0 YS2-14g22.q1k vc_3 412 62 2513 2512 C 351 0.00 453 reject_low 4 ALIGNMENT 289 YS2-14g22.q1k chr12 29 413 460452 460850 F 385 94.03 453 reject_low 1 ALIGNMENT 0 YS2-14g22.q1k chr12 414 453 460850 460849 F 40 0.00 453 reject_low 1 ALIGNMENT 0 YS2-14g22.q1k vc_7 62 415 13525 13524 F 354 0.00 453 reject_low 6 ALIGNMENT 0 YS2-14g22.q1k chr12 62 131 451419 451418 F 70 0.00 453 accept 0 ALIGNMENT 0 YS2-14g22.q1k vc_4 62 412 5831 5830 F 351 0.00 453 reject_low 5 ALIGNMENT 21 YS2-14g23.q1k chr04 198 99 1282823 1282922 C 100 76.00 1249 reject_low 1 ALIGNMENT 0 YS2-14g23.q1k chr04 290 199 1282731 1282822 C 92 0.00 1249 reject_low 1 ALIGNMENT 0 YS2-14g23.q1k chr04 98 62 1282923 1282922 C 37 0.00 1249 reject_low 1 ALIGNMENT 1013 YS2-14g23.q1k chr15 1216 45 934507 935690 C 1172 96.59 1249 accept 0 ALIGNMENT 987 YS2-14g23.p1k chr15 32 1183 929872 931040 F 1152 96.53 1275 accept 0 ALIGNMENT 99 YS2-14g23.q1k chr04 600 291 1282421 1282730 C 310 77.74 1249 reject_low 1 ALIGNMENT 0 YS2-14g23.q1k chr04 924 601 1282422 1282421 C 324 0.00 1249 reject_low 1 ALIGNMENT 1033 YS2-14g24.p1k chr14 38 1211 378189 379375 F 1174 97.44 1343 accept 0 ALIGNMENT 600 YS2-14g24.q1k chr14 819 35 382116 382892 C 785 94.90 1366 accept 0 ALIGNMENT 0 YS2-14h02.q1k chrm 883 178 53666 53665 C 706 0.00 1376 reject_low 2 ALIGNMENT 0 YS2-14h02.p1k chrm 62 495 85 84 F 434 0.00 1376 reject_low 10 ALIGNMENT 0 YS2-14h02.q1k chrm 664 883 34690 34689 F 220 0.00 1376 reject_low 8 ALIGNMENT 0 YS2-14h02.p1k chrm 543 913 2799 2798 F 371 0.00 1376 reject_low 17 ALIGNMENT 141 YS2-14h02.p1k chrm 817 1117 33814 34124 F 301 90.70 1376|3,0 accept 0 ALIGNMENT 20 YS2-14h02.p1k chrm 291 267 34191 34215 C 25 96.00 1376 reject_low 13 ALIGNMENT 0 YS2-14h02.q1k chrm 883 380 34284 34283 C 504 0.00 1376 reject_low 5 ALIGNMENT 0 YS2-14h02.q1k chrm 328 62 76642 76641 C 267 0.00 1376 reject_low 4 ALIGNMENT 55 YS2-14h02.q1k chrm 389 329 76581 76641 C 61 96.72 1376 reject_low 4 ALIGNMENT 0 YS2-14h02.p1k chrm 913 292 34192 34191 C 622 0.00 1376 reject_low 13 ALIGNMENT 0 YS2-14h02.q1k chrm 883 381 53824 53823 C 503 0.00 1376 reject_low 11 ALIGNMENT 0 YS2-14h02.p1k chrm 292 495 2609 2751 F 204 0.00 1376 reject_low 17 ALIGNMENT 0 YS2-14h02.p1k chrm 495 62 62904 62903 C 434 0.00 1376 reject_low 15 ALIGNMENT 0 YS2-14h02.p1k chrm 229 62 33828 33827 C 168 0.00 1376 reject_low 1 ALIGNMENT 38 YS2-14h02.p1k chrm 540 496 62858 62903 C 45 97.78 1376 reject_low 15 ALIGNMENT 48 YS2-14h02.q1k chrm 1057 983 34899 34976 C 75 89.33 1376 reject_low 6 ALIGNMENT 40 YS2-14h02.p1k chrm 542 497 69048 69094 C 46 97.83 1376 reject_low 14 ALIGNMENT 35 YS2-14h02.q1k chrm 177 124 53665 53719 C 54 88.89 1376 reject_low 2 ALIGNMENT 49 YS2-14h02.q1k chrm 379 315 34283 34349 C 65 93.85 1376 reject_low 5 ALIGNMENT 54 YS2-14h02.q1k chrm 1046 953 76574 76665 C 94 89.36 1376 reject_low 3 ALIGNMENT 51 YS2-14h02.q1k chrm 334 387 47475 47528 F 54 98.15 1376 reject_low 7 ALIGNMENT 0 YS2-14h02.p1k chrm 560 913 9556 9555 F 354 0.00 1376 reject_low 16 ALIGNMENT 20 YS2-14h02.p1k chrm 267 291 2584 2608 F 25 96.00 1376 reject_low 16,17 ALIGNMENT 41 YS2-14h02.p1k chrm 496 542 2752 2799 F 47 97.87 1376 reject_low 17 ALIGNMENT 46 YS2-14h02.q1k chrm 982 1058 47474 47552 F 77 88.31 1376 reject_low 9 ALIGNMENT 0 YS2-14h02.q1k chrm 62 619 34647 34646 F 558 0.00 1376 reject_low 8 ALIGNMENT 0 YS2-14h02.q1k chrm 883 390 76582 76581 C 494 0.00 1376 reject_low 4 ALIGNMENT 0 YS2-14h02.p1k chrm 496 62 69095 69094 C 435 0.00 1376 reject_low 14 ALIGNMENT 0 YS2-14h02.q1k chrm 388 883 47528 47527 F 496 0.00 1376 reject_low 7 ALIGNMENT 42 YS2-14h02.q1k chrm 380 319 53823 53882 C 62 91.94 1376 reject_low 11 ALIGNMENT 0 YS2-14h02.p1k chrm 913 289 33768 33767 C 625 0.00 1376 reject_low 1 ALIGNMENT 0 YS2-14h02.q1k chrm 952 62 76666 76665 C 891 0.00 1376 reject_low 3 ALIGNMENT 42 YS2-14h02.q1k chrm 1023 977 53828 53874 C 47 97.87 1376 reject_low 12 ALIGNMENT 52 YS2-14h02.p1k chrm 496 559 9490 9556 F 64 95.31 1376 reject_low 16 ALIGNMENT 0 YS2-14h02.q1k chrm 976 62 53875 53874 C 915 0.00 1376 reject_low 12 ALIGNMENT 0 YS2-14h02.p1k chrm 913 541 62859 62858 C 373 0.00 1376 reject_low 15 ALIGNMENT 0 YS2-14h02.q1k chrm 318 62 53883 53882 C 257 0.00 1376 reject_low 11 ALIGNMENT 22 YS2-14h02.q1k chrm 620 663 34647 34690 F 44 100.00 1376 reject_low 8 ALIGNMENT 0 YS2-14h02.p1k chrm 266 62 34216 34215 C 205 0.00 1376 reject_low 13 ALIGNMENT 0 YS2-14h02.p1k chrm 567 913 154 153 F 347 0.00 1376 reject_low 10 ALIGNMENT 0 YS2-14h02.p1k chrm 292 495 2609 9489 F 204 0.00 1376 reject_low 16 ALIGNMENT 0 YS2-14h02.q1k chrm 982 62 34977 34976 C 921 0.00 1376 reject_low 6 ALIGNMENT 678 YS2-14h02.p1k chrm 31 821 32985 33772 F 791 99.37 1376|0,2 accept 0 ALIGNMENT 0 YS2-14h02.p1k chrm 820 819 33771 33816 F 0 0.00 1376 accept 0 ALIGNMENT 51 YS2-14h02.p1k chrm 288 230 33767 33827 C 59 96.61 1376 reject_low 1 ALIGNMENT 0 YS2-14h02.q1k chrm 314 62 34350 34349 C 253 0.00 1376 reject_low 5 ALIGNMENT 0 YS2-14h02.p1k chrm 913 543 69049 69048 C 371 0.00 1376 reject_low 14 ALIGNMENT 0 YS2-14h02.q1k chrm 62 333 47475 47474 F 272 0.00 1376 reject_low 7 ALIGNMENT 0 YS2-14h02.q1k chrm 62 981 47474 47473 F 920 0.00 1376 reject_low 9 ALIGNMENT 785 YS2-14h02.q1k chrm 1072 48 34239 35262 C 1025 97.85 1376 accept 0 ALIGNMENT 0 YS2-14h02.q1k chrm 123 62 53720 53719 C 62 0.00 1376 reject_low 2 ALIGNMENT 0 YS2-14h02.p1k chrm 62 266 2584 2583 F 205 0.00 1376 reject_low 16,17 ALIGNMENT 45 YS2-14h02.p1k chrm 496 566 85 154 F 71 90.14 1376 reject_low 10 ALIGNMENT 1078 YS2-14h03.p1k chr01 32 1237 81986 83202 F 1206 96.77 1347 accept 0 ALIGNMENT 932 YS2-14h03.q1k chr01 1078 41 84456 85506 C 1038 97.69 1344 accept 0 ALIGNMENT 21 YS2-14h04.q1k chrm 838 817 68645 68666 C 22 100.00 1399 reject_low 10 ALIGNMENT 0 YS2-14h04.p1k chrm 203 62 2805 2804 C 142 0.00 1383 reject_low 2 ALIGNMENT 0 YS2-14h04.q1k chrm 785 932 67036 67035 F 148 0.00 1399 reject_low 1 ALIGNMENT 36 YS2-14h04.p1k chrm 216 269 81404 81457 F 54 90.74 1383 reject_low 6 ALIGNMENT 0 YS2-14h04.p1k chrm 62 206 3051 3050 F 145 0.00 1383 reject_low 7 ALIGNMENT 42 YS2-14h04.p1k chrm 260 138 57027 57148 C 123 83.74 1383|1,0 reject_low 9 ALIGNMENT 0 YS2-14h04.p1k chrm 342 62 979 978 C 281 0.00 1383 reject_low 4 ALIGNMENT 38 YS2-14h04.p1k chrm 257 186 33449 33521 C 72 87.50 1383 reject_low 5 ALIGNMENT 0 YS2-14h04.p1k chrm 137 62 57149 57148 C 76 0.00 1383 reject_low 9 ALIGNMENT 821 YS2-14h04.q1k chrm 38 1214 54719 55899 F 1177 96.77 1399 accept 0 ALIGNMENT 0 YS2-14h04.p1k chrm 270 951 81457 81456 F 682 0.00 1383 reject_low 6 ALIGNMENT 0 YS2-14h04.q1k chrm 62 709 66961 66960 F 648 0.00 1399 reject_low 1 ALIGNMENT 0 YS2-14h04.p1k chrm 259 260 56408 57027 C 0 0.00 1383 reject_low 9 ALIGNMENT 0 YS2-14h04.q1k chrm 842 839 68631 68644 C 4 0.00 1399 reject_low 10 ALIGNMENT 672 YS2-14h04.p1k chrm 1318 36 55352 56590 C 1283 92.21 1383 accept 0 ALIGNMENT 0 YS2-14h04.p1k chrm 951 413 2600 2599 C 539 0.00 1383 reject_low 2 ALIGNMENT 0 YS2-14h04.p1k chrm 168 62 172 171 C 107 0.00 1383 reject_low 3 ALIGNMENT 0 YS2-14h04.p1k chrm 185 62 33522 33521 C 124 0.00 1383 reject_low 5 ALIGNMENT 0 YS2-14h04.p1k chrm 951 310 56359 56358 C 642 0.00 1383 reject_low 9 ALIGNMENT 0 YS2-14h04.p1k chrm 951 413 6192 6191 C 539 0.00 1383 reject_low 8 ALIGNMENT 0 YS2-14h04.p1k chrm 373 62 6230 6229 C 312 0.00 1383 reject_low 8 ALIGNMENT 0 YS2-14h04.p1k chrm 951 258 33450 33449 C 694 0.00 1383 reject_low 5 ALIGNMENT 35 YS2-14h04.q1k chrm 710 784 66961 67036 F 75 85.33 1399 reject_low 1 ALIGNMENT 0 YS2-14h04.p1k chrm 62 215 81404 81403 F 154 0.00 1383 reject_low 6 ALIGNMENT 0 YS2-14h04.p1k chrm 413 951 55463 55462 F 539 0.00 1383 reject_low 10 ALIGNMENT 23 YS2-14h04.q1k chrm 947 843 68524 68630 C 105 80.95 1399 reject_low 10 ALIGNMENT 0 YS2-14h04.q1k chrm 816 62 68667 68666 C 755 0.00 1399 reject_low 10 ALIGNMENT 0 YS2-14h04.p1k chrm 62 210 53823 53822 F 149 0.00 1383 reject_low 10 ALIGNMENT 0 YS2-14h04.p1k chrm 951 413 910 909 C 539 0.00 1383 reject_low 4 ALIGNMENT 0 YS2-14h04.p1k chrm 260 341 53871 55395 F 82 0.00 1383 reject_low 10 ALIGNMENT 40 YS2-14h04.p1k chrm 412 204 2599 2804 C 209 78.47 1383 reject_low 2 ALIGNMENT 38 YS2-14h04.p1k chrm 207 257 3051 3101 F 51 92.16 1383 reject_low 7 ALIGNMENT 0 YS2-14h04.p1k chrm 258 951 3101 3100 F 694 0.00 1383 reject_low 7 ALIGNMENT 42 YS2-14h04.p1k chrm 268 169 75 171 C 100 84.00 1383 reject_low 3 ALIGNMENT 21 YS2-14h04.p1k chrm 412 374 6191 6229 C 39 89.74 1383 reject_low 8 ALIGNMENT 36 YS2-14h04.p1k chrm 211 259 53823 53870 F 49 93.88 1383 reject_low 10 ALIGNMENT 0 YS2-14h04.p1k chrm 951 269 76 75 C 683 0.00 1383 reject_low 3 ALIGNMENT 27 YS2-14h04.p1k chrm 309 258 56358 56409 C 52 100.00 1383|0,2 reject_low 9 ALIGNMENT 26 YS2-14h04.p1k chrm 342 412 55396 55463 F 71 83.10 1383 reject_low 10 ALIGNMENT 31 YS2-14h04.p1k chrm 412 343 909 978 C 70 82.86 1383 reject_low 4 ALIGNMENT 978 YS2-14h05.q1k chr05 30 1124 445215 446326 F 1095 97.81 1325 ambiguous_trans 1 ALIGNMENT 978 YS2-14h05.q1k chr13 1124 30 199322 200433 C 1095 97.81 1325 ambiguous_trans 2 ALIGNMENT 962 YS2-14h05.q1k chr12 30 1106 477797 478886 F 1077 97.68 1325 ambiguous_trans 12 ALIGNMENT 965 YS2-14h05.q1k chr15 1110 30 597823 598917 C 1081 97.69 1325 ambiguous_trans 8 ALIGNMENT 962 YS2-14h05.q1k chr16 1106 30 59464 60553 C 1077 97.68 1325 ambiguous_trans 14 ALIGNMENT 957 YS2-14h05.q1k chr13 1124 30 187155 188266 C 1095 97.17 1325 ambiguous_trans 6 ALIGNMENT 953 YS2-14h05.q1k chr01 30 1106 162061 163150 F 1077 97.40 1325 ambiguous_trans 15 ALIGNMENT 944 YS2-14h05.q1k chr07 30 1106 563666 564755 F 1077 97.12 1325 ambiguous_trans 19 ALIGNMENT 944 YS2-14h05.q1k chr16 1106 30 847424 848513 C 1077 97.12 1325 ambiguous_trans 20 ALIGNMENT 972 YS2-14h05.q1k chr10 1124 30 480952 482063 C 1095 97.63 1325 ambiguous_trans 4 ALIGNMENT 959 YS2-14h05.q1k chr07 1110 30 538772 539866 C 1081 97.50 1325 ambiguous_trans 9 ALIGNMENT 944 YS2-14h05.q1k chr04 1106 30 1098775 1099864 C 1077 97.12 1325 ambiguous_trans 18 ALIGNMENT 962 YS2-14h05.q1k chr04 1106 30 1209703 1210792 C 1077 97.68 1325 ambiguous_trans 11 ALIGNMENT 1058 YS2-14h05.p1k chr05 1236 32 439785 440994 C 1205 97.01 1241 accept 0 ALIGNMENT 962 YS2-14h05.q1k chr04 30 1106 988538 989627 F 1077 97.68 1325 ambiguous_trans 10 ALIGNMENT 809 YS2-14h05.q1k chr13 30 1106 358821 359910 F 1077 92.94 1325 ambiguous_trans 23 ALIGNMENT 978 YS2-14h05.q1k chr15 1124 30 120693 121804 C 1095 97.81 1325 ambiguous_trans 3 ALIGNMENT 944 YS2-14h05.q1k chr04 30 1106 647316 648405 F 1077 97.12 1325 ambiguous_trans 17 ALIGNMENT 914 YS2-14h05.q1k chr04 30 1106 880117 881206 F 1077 96.19 1325 ambiguous_trans 21 ALIGNMENT 968 YS2-14h05.q1k chr10 1110 30 475385 476479 C 1081 97.78 1325 ambiguous_trans 7 ALIGNMENT 969 YS2-14h05.q1k chr13 30 1124 374519 375630 F 1095 97.53 1325 ambiguous_trans 5 ALIGNMENT 890 YS2-14h05.q1k chr16 30 1106 852448 853537 F 1077 95.45 1325 ambiguous_trans 22 ALIGNMENT 962 YS2-14h05.q1k chr12 1106 30 653837 654926 C 1077 97.68 1325 ambiguous_trans 13 ALIGNMENT 953 YS2-14h05.q1k chr16 30 1106 806460 807549 F 1077 97.40 1325 ambiguous_trans 16 ALIGNMENT 0 YS2-14h06.q1k vc_1 222 62 2512 2511 C 161 0.00 262 reject_low 2 ALIGNMENT 0 YS2-14h06.q1k vc_4 62 222 5832 5831 F 161 0.00 262 reject_low 5 ALIGNMENT 38 YS2-14h06.q1k vc_7 225 262 13525 13562 F 38 100.00 262 reject_low 7 ALIGNMENT 40 YS2-14h06.q1k vc_1 262 223 2472 2511 C 40 100.00 262 reject_low 2 ALIGNMENT 176 YS2-14h06.q1k chr02 222 39 397607 397790 C 184 100.00 262 accept_chi 0 ALIGNMENT 40 YS2-14h06.q1k vc_4 223 262 5832 5871 F 40 100.00 262 reject_low 5 ALIGNMENT 0 YS2-14h06.q1k vc_7 62 224 13525 13524 F 163 0.00 262 reject_low 7 ALIGNMENT 0 YS2-14h06.q1k chr02 262 223 397608 397607 C 40 0.00 262 accept_chi 0 ALIGNMENT 40 YS2-14h06.q1k vc_2 262 223 2105 2144 C 40 100.00 262 reject_low 3 ALIGNMENT 0 YS2-14h06.q1k vc_5 223 62 37 36 C 162 0.00 262 reject_low 8 ALIGNMENT 0 YS2-14h06.q1k vc_2 222 62 2145 2144 C 161 0.00 262 reject_low 3 ALIGNMENT 40 YS2-14h06.q1k vc_3 262 223 2472 2511 C 40 100.00 262 reject_low 4 ALIGNMENT 36 YS2-14h06.q1k vc_5 259 224 1 36 C 36 100.00 262 reject_low 8 ALIGNMENT 171 YS2-14h06.p1k chr02 54 236 397607 397790 F 183 99.45 254 accept_chi 1 ALIGNMENT 39 YS2-14h06.q1k vc_5 262 224 5025 5063 C 39 100.00 262 reject_low 6 ALIGNMENT 0 YS2-14h06.q1k vc_5 223 62 5064 5063 C 162 0.00 262 reject_low 6 ALIGNMENT 0 YS2-14h06.p1k chr02 237 254 397790 397789 F 18 0.00 254 accept_chi 1 ALIGNMENT 0 YS2-14h06.q1k vc_3 222 62 2512 2511 C 161 0.00 262 reject_low 4 ALIGNMENT 882 YS2-14h08.p1k chr04 952 32 544799 545719 C 921 99.46 1379 accept 0 ALIGNMENT 140 YS2-14h08.p1k chr04 1173 952 544448 544678 C 222 87.84 1379|0,1 accept 0 ALIGNMENT 0 YS2-14h08.p1k chr04 952 953 544678 544798 C 0 0.00 1379 accept 0 ALIGNMENT 1008 YS2-14h08.q1k chr04 42 1220 539974 541170 F 1179 96.10 1423 accept 0 ALIGNMENT 0 YS2-14h09.p1k chr15 905 649 22517 22516 C 257 0.00 1246 ambiguous_tel 2 ALIGNMENT 0 YS2-14h09.p1k chr07 905 641 1067229 1067228 C 265 0.00 1246 ambiguous_tel 1 ALIGNMENT 0 YS2-14h09.p1k chr09 905 641 16785 16784 C 265 0.00 1246 ambiguous_tel 3 ALIGNMENT 803 YS2-14h09.q1k chr07 39 900 1075274 1076135 F 862 98.49 1320 accept 0 ALIGNMENT 81 YS2-14h09.p1k chr10 291 41 17116 17366 C 251 78.09 1246 ambiguous_tel 4 ALIGNMENT 0 YS2-14h09.p1k chr10 601 208 24380 24764 C 394 0.00 1246 ambiguous_tel 5 ALIGNMENT 26 YS2-14h09.p1k chr10 207 156 24765 24816 C 52 84.62 1246 ambiguous_tel 5 ALIGNMENT 140 YS2-14h09.p1k chr09 640 41 16784 17383 C 600 75.67 1246 ambiguous_tel 3 ALIGNMENT 233 YS2-14h09.p1k chr07 640 33 1067228 1067836 C 608 80.43 1246 ambiguous_tel 1 ALIGNMENT 138 YS2-14h09.p1k chr15 648 41 22516 23123 C 608 75.33 1246 ambiguous_tel 2 ALIGNMENT 0 YS2-14h09.p1k chr10 155 62 24817 24816 C 94 0.00 1246 ambiguous_tel 5 ALIGNMENT 0 YS2-14h09.p1k chr10 905 629 24354 24353 C 277 0.00 1246 ambiguous_tel 5 ALIGNMENT 20 YS2-14h09.p1k chr10 628 602 24353 24379 C 27 92.59 1246 ambiguous_tel 5 ALIGNMENT 0 YS2-14h09.p1k chr10 905 292 17117 17116 C 614 0.00 1246 ambiguous_tel 4 ALIGNMENT 0 YS2-14h11.p1k chr05 530 62 64091 64090 C 469 0.00 1440 reject_low 18 ALIGNMENT 44 YS2-14h11.p1k chr03 918 741 289999 290175 C 178 77.53 1440 reject_low 21 ALIGNMENT 936 YS2-14h11.q1k chr02 1076 47 11316 12350 C 1030 97.77 1373 accept 0 ALIGNMENT 0 YS2-14h11.p1k chr02 408 62 809535 809534 C 347 0.00 1440 reject_low 13 ALIGNMENT 0 YS2-14h11.p1k chr01 62 506 176631 176630 F 445 0.00 1440 reject_low 20 ALIGNMENT 333 YS2-14h11.p1k chr09 1229 465 433583 434362 C 765 82.48 1440 reject_low 15 ALIGNMENT 412 YS2-14h11.p1k chr02 992 409 808950 809534 C 584 91.27 1440 reject_low 13 ALIGNMENT 0 YS2-14h11.p1k chr03 390 62 308310 308309 C 329 0.00 1440 reject_low 11 ALIGNMENT 215 YS2-14h11.p1k chr01 507 902 176631 177031 F 396 85.86 1440 reject_low 20 ALIGNMENT 318 YS2-14h11.p1k chr05 929 531 63694 64090 C 399 93.98 1440 reject_low 18 ALIGNMENT 288 YS2-14h11.p1k chr16 467 1124 7873 8540 F 658 82.37 1440 reject_low 19 ALIGNMENT 661 YS2-14h11.p1k chr11 44 1168 1319 2462 F 1125 87.11 1440 reject_low 8 ALIGNMENT 870 YS2-14h11.p1k chr14 1236 44 781567 782765 C 1193 91.70 1440 reject_low 1 ALIGNMENT 0 YS2-14h11.p1k chr09 464 62 434363 434362 C 403 0.00 1440 reject_low 15 ALIGNMENT 277 YS2-14h11.p1k chr13 1124 224 922408 923324 C 901 78.91 1440 reject_low 17 ALIGNMENT 331 YS2-14h11.p1k chr15 1124 133 1082601 1083610 C 992 79.44 1440 reject_low 14 ALIGNMENT 695 YS2-14h11.p1k chr01 50 1229 1322 2509 F 1180 87.37 1440 reject_low 6 ALIGNMENT 0 YS2-14h11.p1k chr03 740 62 290176 290175 C 679 0.00 1440 reject_low 21 ALIGNMENT 0 YS2-14h11.p1k chr07 62 437 6195 6194 F 376 0.00 1440 reject_low 10 ALIGNMENT 0 YS2-14h11.p1k chr15 132 62 1083611 1083610 C 71 0.00 1440 reject_low 14 ALIGNMENT 0 YS2-14h11.p1k chr16 62 466 7873 7872 F 405 0.00 1440 reject_low 19 ALIGNMENT 414 YS2-14h11.p1k chr08 500 1124 11890 12525 F 625 89.44 1440 reject_low 12 ALIGNMENT 789 YS2-14h11.p1k chr10 50 1234 8288 9486 F 1185 89.87 1440 reject_low 5 ALIGNMENT 0 YS2-14h11.p1k chr07 408 62 1080791 1080790 C 347 0.00 1440 reject_low 16 ALIGNMENT 456 YS2-14h11.p1k chr07 438 1168 6195 6932 F 731 88.51 1440 reject_low 10 ALIGNMENT 0 YS2-14h11.p1k chr13 223 62 923325 923324 C 162 0.00 1440 reject_low 17 ALIGNMENT 396 YS2-14h11.p1k chr07 992 409 1080211 1080790 C 584 90.41 1440 reject_low 16 ALIGNMENT 850 YS2-14h11.p1k chr02 44 1168 7120 8249 F 1125 92.62 1440 accept 0 ALIGNMENT 719 YS2-14h11.p1k chr15 50 1089 11071 12105 F 1040 90.48 1440 reject_low 7 ALIGNMENT 624 YS2-14h11.p1k chr04 923 44 1523200 1524089 C 880 91.02 1440 reject_low 9 ALIGNMENT 397 YS2-14h11.p1k chr03 1234 391 307448 308309 C 844 83.77 1440 reject_low 11 ALIGNMENT 849 YS2-14h11.p1k chr12 44 1234 12598 13794 F 1191 91.44 1440 reject_low 2 ALIGNMENT 786 YS2-14h11.p1k chr12 1234 44 1062568 1063763 C 1191 89.59 1440 reject_low 4 ALIGNMENT 0 YS2-14h11.p1k chr08 62 499 11890 11889 F 438 0.00 1440 reject_low 12 ALIGNMENT 792 YS2-14h11.p1k chr09 50 1234 8305 9503 F 1185 89.96 1440 reject_low 3 ALIGNMENT 0 YS2-14h12.q1k vc_2 244 62 2145 2144 C 183 0.00 284 reject_low 3 ALIGNMENT 38 YS2-14h12.q1k vc_7 247 284 13525 13562 F 38 100.00 284 reject_low 7 ALIGNMENT 0 YS2-14h12.q1k chr13 284 245 356581 356580 C 40 0.00 284 accept_chi 0 ALIGNMENT 40 YS2-14h12.q1k vc_2 284 245 2105 2144 C 40 100.00 284 reject_low 3 ALIGNMENT 0 YS2-14h12.q1k vc_7 62 246 13525 13524 F 185 0.00 284 reject_low 7 ALIGNMENT 198 YS2-14h12.q1k chr13 244 40 356580 356784 C 205 100.00 284 accept_chi 0 ALIGNMENT 39 YS2-14h12.q1k vc_5 284 246 5025 5063 C 39 100.00 284 reject_low 6 ALIGNMENT 40 YS2-14h12.q1k vc_4 245 284 5832 5871 F 40 100.00 284 reject_low 5 ALIGNMENT 40 YS2-14h12.q1k vc_1 284 245 2472 2511 C 40 100.00 284 reject_low 2 ALIGNMENT 36 YS2-14h12.q1k vc_5 281 246 1 36 C 36 100.00 284 reject_low 8 ALIGNMENT 0 YS2-14h12.q1k vc_1 244 62 2512 2511 C 183 0.00 284 reject_low 2 ALIGNMENT 190 YS2-14h12.p1k chr13 33 234 356582 356784 F 202 99.01 253 accept_chi 1 ALIGNMENT 0 YS2-14h12.q1k vc_3 244 62 2512 2511 C 183 0.00 284 reject_low 4 ALIGNMENT 40 YS2-14h12.q1k vc_3 284 245 2472 2511 C 40 100.00 284 reject_low 4 ALIGNMENT 0 YS2-14h12.q1k vc_5 245 62 37 36 C 184 0.00 284 reject_low 8 ALIGNMENT 0 YS2-14h12.p1k chr13 235 253 356784 356783 F 19 0.00 253 accept_chi 1 ALIGNMENT 0 YS2-14h12.q1k vc_4 62 244 5832 5831 F 183 0.00 284 reject_low 5 ALIGNMENT 0 YS2-14h12.q1k vc_5 245 62 5064 5063 C 184 0.00 284 reject_low 6 ALIGNMENT 0 YS2-14h13.q1k vc_4 237 62 113 112 C 176 0.00 735 reject_low 9 ALIGNMENT 232 YS2-14h13.q1k vc_7 303 53 4922 5172 C 251 97.61 735|0,1 reject_vc 7 ALIGNMENT 280 YS2-14h13.p1k chrm 484 35 5304 5753 C 450 98.22 503 accept 0 ALIGNMENT 398 YS2-14h13.q1k vc_5 1 632 2556 3188 F 632 89.24 735 reject_vc 1 ALIGNMENT 0 YS2-14h13.q1k vc_4 305 309 1615 1881 F 5 0.00 735 reject_vc 8 ALIGNMENT 56 YS2-14h13.q1k vc_4 238 304 1548 1614 F 67 95.52 735 reject_vc 8 ALIGNMENT 345 YS2-14h13.q1k vc_4 423 1 5232 5654 C 423 95.04 735 reject_vc 3 ALIGNMENT 287 YS2-14h13.q1k vc_3 1 303 2689 2991 F 303 98.35 735 reject_vc 6 ALIGNMENT 287 YS2-14h13.q1k vc_1 1 303 2689 2991 F 303 98.35 735 reject_vc 4 ALIGNMENT 104 YS2-14h13.q1k vc_4 310 632 1882 2204 F 323 80.80 735 reject_vc 8 ALIGNMENT 0 YS2-14h13.q1k vc_7 304 304 4700 4921 C 1 0.00 735 reject_vc 7 ALIGNMENT 56 YS2-14h13.q1k vc_4 304 238 6273 6339 C 67 95.52 735 reject_low 10 ALIGNMENT 63 YS2-14h13.q1k vc_7 423 305 4583 4699 C 119 88.24 735 reject_vc 7 ALIGNMENT 0 YS2-14h13.q1k vc_7 53 54 5172 6360 C 0 0.00 735 reject_vc 7 ALIGNMENT 0 YS2-14h13.q1k vc_4 237 62 6340 6339 C 176 0.00 735 reject_low 10 ALIGNMENT 381 YS2-14h13.q1k vc_7 500 1 2073 2569 C 500 93.00 735 reject_vc 2 ALIGNMENT 0 YS2-14h13.p1k chrm 503 485 5305 5304 C 19 0.00 503 accept 0 ALIGNMENT 0 YS2-14h13.q1k vc_4 62 237 1548 1547 F 176 0.00 735 reject_vc 8 ALIGNMENT 56 YS2-14h13.q1k vc_4 304 238 46 112 C 67 95.52 735 reject_low 9 ALIGNMENT 51 YS2-14h13.q1k vc_7 54 3 6360 6411 C 52 100.00 735|1,0 reject_vc 7 ALIGNMENT 287 YS2-14h13.q1k vc_2 1 303 2322 2624 F 303 98.35 735 reject_vc 5 ALIGNMENT 968 YS2-14h14.q1k chr16 41 1167 242361 243501 F 1127 96.01 1354 accept 0 ALIGNMENT 901 YS2-14h14.p1k chr16 1040 33 246642 247668 C 1008 97.62 1316 accept 0 ALIGNMENT 41 YS2-14h15.q1k vc_4 249 289 5831 5871 F 41 100.00 289 reject_low 5 ALIGNMENT 39 YS2-14h15.q1k vc_5 289 251 5025 5063 C 39 100.00 289 reject_low 6 ALIGNMENT 0 YS2-14h15.q1k vc_5 250 62 37 36 C 189 0.00 289 reject_low 8 ALIGNMENT 41 YS2-14h15.q1k vc_3 289 249 2472 2512 C 41 100.00 289 reject_low 4 ALIGNMENT 0 YS2-14h15.q1k vc_2 248 62 2146 2145 C 187 0.00 289 reject_low 3 ALIGNMENT 38 YS2-14h15.q1k vc_7 252 289 13525 13562 F 38 100.00 289 reject_low 7 ALIGNMENT 41 YS2-14h15.q1k vc_2 289 249 2105 2145 C 41 100.00 289 reject_low 3 ALIGNMENT 0 YS2-14h15.p1k chr14 241 259 396751 396750 F 19 0.00 259 accept_chi 0 ALIGNMENT 0 YS2-14h15.q1k vc_7 62 251 13525 13524 F 190 0.00 289 reject_low 7 ALIGNMENT 193 YS2-14h15.p1k chr14 32 240 396543 396751 F 209 98.09 259 accept_chi 0 ALIGNMENT 0 YS2-14h15.q1k vc_3 248 62 2513 2512 C 187 0.00 289 reject_low 4 ALIGNMENT 0 YS2-14h15.q1k vc_1 248 62 2513 2512 C 187 0.00 289 reject_low 2 ALIGNMENT 0 YS2-14h15.q1k vc_4 62 248 5831 5830 F 187 0.00 289 reject_low 5 ALIGNMENT 0 YS2-14h15.q1k vc_5 250 62 5064 5063 C 189 0.00 289 reject_low 6 ALIGNMENT 36 YS2-14h15.q1k vc_5 286 251 1 36 C 36 100.00 289 reject_low 8 ALIGNMENT 190 YS2-14h15.q1k chr14 249 41 396543 396751 C 209 97.61 289 accept_chi 1 ALIGNMENT 41 YS2-14h15.q1k vc_1 289 249 2472 2512 C 41 100.00 289 reject_low 2 ALIGNMENT 0 YS2-14h15.q1k chr14 289 250 396544 396543 C 40 0.00 289 accept_chi 1 ALIGNMENT 327 YS2-14h16.p1k chr16 836 56 246881 247652 C 781 82.07 1465 accept 0 ALIGNMENT 0 YS2-14h17.p1k chr12 62 908 465031 465030 F 847 0.00 1242 reject_low 2 ALIGNMENT 225 YS2-14h17.p1k chr12 909 1234 455894 456224 F 326 90.49 1242 reject_low 1 ALIGNMENT 0 YS2-14h17.q1k chr12 88 62 489482 489481 C 27 0.00 1326 reject_low 3 ALIGNMENT 0 YS2-14h17.q1k chr12 859 223 485697 485696 C 637 0.00 1326 reject_low 7 ALIGNMENT 0 YS2-14h17.q1k chr12 103 62 485815 485814 C 42 0.00 1326 reject_low 7 ALIGNMENT 225 YS2-14h17.p1k chr12 909 1234 465031 465361 F 326 90.49 1242 reject_low 2 ALIGNMENT 0 YS2-14h17.q1k chr06 62 481 31622 31621 F 420 0.00 1326 reject_low 4 ALIGNMENT 0 YS2-14h17.q1k chr06 590 859 31729 31728 F 270 0.00 1326 reject_low 4 ALIGNMENT 0 YS2-14h17.q1k chr12 859 223 472465 472464 C 637 0.00 1326 reject_low 5 ALIGNMENT 128 YS2-14h17.q1k chr12 222 89 489348 489481 C 134 98.51 1326 reject_low 3 ALIGNMENT 833 YS2-14h17.p1k chr16 37 894 733874 734731 F 858 99.42 1242 accept 0 ALIGNMENT 119 YS2-14h17.q1k chr12 222 104 482044 482162 C 119 100.00 1326 reject_low 6 ALIGNMENT 119 YS2-14h17.q1k chr12 222 104 472464 472582 C 119 100.00 1326 reject_low 5 ALIGNMENT 0 YS2-14h17.q1k chr12 78 74 459819 459832 C 5 0.00 1326 reject_low 1 ALIGNMENT 29 YS2-14h17.q1k chr12 73 43 459833 459863 C 31 100.00 1326 reject_low 1 ALIGNMENT 0 YS2-14h17.q1k chr12 859 223 482045 482044 C 637 0.00 1326 reject_low 6 ALIGNMENT 119 YS2-14h17.q1k chr12 222 104 485696 485814 C 119 100.00 1326 reject_low 7 ALIGNMENT 0 YS2-14h17.q1k chr12 103 62 482163 482162 C 42 0.00 1326 reject_low 6 ALIGNMENT 879 YS2-14h17.q1k chr12 1110 104 467913 468930 C 1007 97.42 1326 reject_low 2 ALIGNMENT 0 YS2-14h17.q1k chr12 103 62 472583 472582 C 42 0.00 1326 reject_low 5 ALIGNMENT 0 YS2-14h17.p1k chr12 62 908 455894 455893 F 847 0.00 1242 reject_low 1 ALIGNMENT 900 YS2-14h17.q1k chr12 1110 79 458776 459818 C 1032 97.48 1326 reject_low 1 ALIGNMENT 94 YS2-14h17.q1k chr06 482 589 31622 31729 F 108 98.15 1326 reject_low 4 ALIGNMENT 0 YS2-14h17.q1k chr12 859 223 489349 489348 C 637 0.00 1326 reject_low 3 ALIGNMENT 0 YS2-14h17.q1k chr12 103 62 468931 468930 C 42 0.00 1326 reject_low 2 ALIGNMENT 0 YS2-14h18.p1k chr02 321 62 534810 534809 C 260 0.00 1249 reject_low 2 ALIGNMENT 1065 YS2-14h18.p1k chr13 34 1228 873004 874204 F 1195 96.82 1249 accept 0 ALIGNMENT 515 YS2-14h18.p1k chr15 294 1220 159522 160452 F 927 85.76 1249 reject_low 1 ALIGNMENT 1013 YS2-14h18.q1k chr13 1186 32 876762 877926 C 1155 96.80 1368 accept 0 ALIGNMENT 0 YS2-14h18.p1k chr13 608 62 435626 435625 C 547 0.00 1249 reject_low 3 ALIGNMENT 81 YS2-14h18.p1k chr13 937 609 435297 435625 C 329 75.38 1249 reject_low 3 ALIGNMENT 154 YS2-14h18.p1k chr02 1170 322 533958 534809 C 849 73.73 1249 reject_low 2 ALIGNMENT 0 YS2-14h18.p1k chr15 62 293 159522 159521 F 232 0.00 1249 reject_low 1 ALIGNMENT 0 YS2-14h19.q1k vc_3 255 62 2513 2512 C 194 0.00 296 reject_low 3 ALIGNMENT 0 YS2-14h19.q1k vc_1 255 62 2513 2512 C 194 0.00 296 reject_low 2 ALIGNMENT 41 YS2-14h19.q1k vc_3 296 256 2472 2512 C 41 100.00 296 reject_low 3 ALIGNMENT 216 YS2-14h19.q1k chr05 30 255 234629 234854 F 226 99.12 296 accept_chi 0 ALIGNMENT 0 YS2-14h19.q1k vc_4 62 255 5831 5830 F 194 0.00 296 reject_low 4 ALIGNMENT 37 YS2-14h19.q1k vc_5 293 254 1 40 C 40 97.50 296 reject_low 7 ALIGNMENT 41 YS2-14h19.q1k vc_4 256 296 5831 5871 F 41 100.00 296 reject_low 4 ALIGNMENT 40 YS2-14h19.q1k vc_5 296 254 5025 5067 C 43 97.67 296 reject_low 5 ALIGNMENT 0 YS2-14h19.p1k chr05 279 262 234627 234626 C 18 0.00 279 accept_chi 1 ALIGNMENT 41 YS2-14h19.q1k vc_1 296 256 2472 2512 C 41 100.00 296 reject_low 2 ALIGNMENT 0 YS2-14h19.q1k chr05 256 296 234854 234853 F 41 0.00 296 accept_chi 0 ALIGNMENT 38 YS2-14h19.q1k vc_7 259 296 13525 13562 F 38 100.00 296 reject_low 6 ALIGNMENT 0 YS2-14h19.q1k vc_7 62 258 13525 13524 F 197 0.00 296 reject_low 6 ALIGNMENT 0 YS2-14h19.q1k vc_5 253 62 41 40 C 192 0.00 296 reject_low 7 ALIGNMENT 0 YS2-14h19.q1k vc_5 253 62 5068 5067 C 192 0.00 296 reject_low 5 ALIGNMENT 214 YS2-14h19.p1k chr05 261 34 234626 234854 C 228 98.68 279 accept_chi 1 ALIGNMENT 41 YS2-14h20.q1k vc_1 293 253 2472 2512 C 41 100.00 293 reject_low 8 ALIGNMENT 343 YS2-14h20.p1k vc_2 607 1 1143 1749 C 607 86.66 705 reject_vc 3 ALIGNMENT 37 YS2-14h20.q1k vc_5 290 251 1 40 C 40 97.50 293 reject_low 13 ALIGNMENT 40 YS2-14h20.q1k vc_5 293 251 5025 5067 C 43 97.67 293 reject_low 11 ALIGNMENT 337 YS2-14h20.p1k vc_7 1 607 456 1062 F 607 86.33 705 reject_vc 5 ALIGNMENT 0 YS2-14h20.q1k vc_7 62 255 13525 13524 F 194 0.00 293 reject_low 12 ALIGNMENT 210 YS2-14h20.q1k chr05 32 252 234633 234854 F 221 99.10 293 accept 0 ALIGNMENT 343 YS2-14h20.p1k vc_1 607 1 1143 1749 C 607 86.66 705 reject_vc 2 ALIGNMENT 38 YS2-14h20.q1k vc_7 256 293 13525 13562 F 38 100.00 293 reject_low 12 ALIGNMENT 0 YS2-14h20.q1k vc_5 250 62 41 40 C 189 0.00 293 reject_low 13 ALIGNMENT 337 YS2-14h20.p1k vc_7 1 607 13918 14524 F 607 86.33 705 reject_vc 6 ALIGNMENT 0 YS2-14h20.q1k vc_1 252 62 2513 2512 C 191 0.00 293 reject_low 8 ALIGNMENT 41 YS2-14h20.q1k vc_4 253 293 5831 5871 F 41 100.00 293 reject_low 10 ALIGNMENT 0 YS2-14h20.q1k vc_5 250 62 5068 5067 C 189 0.00 293 reject_low 11 ALIGNMENT 343 YS2-14h20.p1k vc_3 607 1 1143 1749 C 607 86.66 705 reject_vc 4 ALIGNMENT 323 YS2-14h20.p1k vc_6 1 475 3712 4184 F 475 90.32 705 reject_vc 7 ALIGNMENT 346 YS2-14h20.p1k vc_5 607 1 4063 4669 C 607 86.82 705 reject_vc 1 ALIGNMENT 0 YS2-14h20.q1k vc_4 62 252 5831 5830 F 191 0.00 293 reject_low 10 ALIGNMENT 0 YS2-14h20.q1k vc_3 252 62 2513 2512 C 191 0.00 293 reject_low 9 ALIGNMENT 0 YS2-14h20.q1k chr05 253 293 234854 234853 F 41 0.00 293 accept 0 ALIGNMENT 41 YS2-14h20.q1k vc_3 293 253 2472 2512 C 41 100.00 293 reject_low 9 ALIGNMENT 1017 YS2-14h21.q1k chr12 31 1139 909453 910568 F 1109 98.11 1290 accept 0 ALIGNMENT 1000 YS2-14h21.p1k chr12 1159 33 910878 912014 C 1127 97.34 1310 accept 0 ALIGNMENT 994 YS2-14h23.p1k chr16 35 1145 782527 783649 F 1111 97.57 1336 accept 0 ALIGNMENT 988 YS2-14h23.q1k chr16 1212 51 786510 787673 C 1162 96.04 1303 accept 0 ALIGNMENT 42 YS2-14h24.q1k vc_1 378 337 2472 2513 C 42 100.00 378 reject_vc 0 ALIGNMENT 38 YS2-14h24.q1k vc_7 341 378 13525 13562 F 38 100.00 378 reject_vc 4 ALIGNMENT 39 YS2-14h24.q1k vc_5 378 340 5025 5063 C 39 100.00 378 reject_vc 3 ALIGNMENT 0 YS2-14h24.q1k vc_7 62 340 13525 13524 F 279 0.00 378 reject_vc 4 ALIGNMENT 0 YS2-14h24.q1k vc_3 336 62 2514 2513 C 275 0.00 378 reject_vc 1 ALIGNMENT 0 YS2-14h24.q1k vc_1 336 62 2514 2513 C 275 0.00 378 reject_vc 0 ALIGNMENT 42 YS2-14h24.q1k vc_3 378 337 2472 2513 C 42 100.00 378 reject_vc 1 ALIGNMENT 0 YS2-14h24.q1k vc_5 339 62 5064 5063 C 278 0.00 378 reject_vc 3 ALIGNMENT 36 YS2-14h24.q1k vc_5 375 340 1 36 C 36 100.00 378 reject_vc 5 ALIGNMENT 0 YS2-14h24.q1k vc_5 339 62 37 36 C 278 0.00 378 reject_vc 5 ALIGNMENT 42 YS2-14h24.q1k vc_4 337 378 5830 5871 F 42 100.00 378 reject_vc 2 ALIGNMENT 0 YS2-14h24.q1k vc_4 62 336 5830 5829 F 275 0.00 378 reject_vc 2 ALIGNMENT 899 YS2-14i01.q1k chr02 1059 34 250878 251919 C 1026 96.88 1285 accept 0 ALIGNMENT 392 YS2-14i02.q1k chr13 81 871 545114 545904 F 791 83.94 1399 accept 0 ALIGNMENT 969 YS2-14i04.q1k chr14 39 1181 188712 189877 F 1143 95.36 1415 accept 0 ALIGNMENT 984 YS2-14i04.p1k chr14 1146 39 192963 194084 C 1108 97.65 1323 accept 0 ALIGNMENT 910 YS2-14i06.q1k chr04 1072 43 799138 800178 C 1030 96.50 1314 accept 0 ALIGNMENT 996 YS2-14i06.p1k chr04 56 1235 795576 796769 F 1180 95.76 1343 accept 0 ALIGNMENT 965 YS2-14i07.q1k chr12 1174 30 273205 274371 C 1145 95.98 1360 accept 0 ALIGNMENT 1002 YS2-14i07.p1k chr12 30 1177 270179 271336 F 1148 96.95 1359 accept 0 ALIGNMENT 0 YS2-14i08.q1k vc_4 62 474 5831 5830 F 413 0.00 515 reject_low 5 ALIGNMENT 0 YS2-14i08.q1k vc_5 476 62 37 36 C 415 0.00 515 reject_low 8 ALIGNMENT 41 YS2-14i08.q1k vc_2 515 475 2105 2145 C 41 100.00 515 reject_low 3 ALIGNMENT 41 YS2-14i08.q1k vc_1 515 475 2472 2512 C 41 100.00 515 reject_low 2 ALIGNMENT 41 YS2-14i08.q1k vc_3 515 475 2472 2512 C 41 100.00 515 reject_low 4 ALIGNMENT 0 YS2-14i08.q1k vc_2 474 62 2146 2145 C 413 0.00 515 reject_low 3 ALIGNMENT 0 YS2-14i08.q1k vc_1 474 62 2513 2512 C 413 0.00 515 reject_low 2 ALIGNMENT 39 YS2-14i08.q1k vc_5 515 477 5025 5063 C 39 100.00 515 reject_low 6 ALIGNMENT 421 YS2-14i08.p1k chr07 466 31 107060 107496 C 436 99.31 484 accept_chi 1 ALIGNMENT 0 YS2-14i08.q1k vc_3 474 62 2513 2512 C 413 0.00 515 reject_low 4 ALIGNMENT 0 YS2-14i08.q1k chr07 477 515 107496 107495 F 39 0.00 515 accept_chi 0 ALIGNMENT 0 YS2-14i08.q1k vc_5 476 62 5064 5063 C 415 0.00 515 reject_low 6 ALIGNMENT 0 YS2-14i08.p1k chr07 484 467 107061 107060 C 18 0.00 484 accept_chi 1 ALIGNMENT 0 YS2-14i08.q1k vc_7 62 477 13525 13524 F 416 0.00 515 reject_low 7 ALIGNMENT 36 YS2-14i08.q1k vc_5 512 477 1 36 C 36 100.00 515 reject_low 8 ALIGNMENT 38 YS2-14i08.q1k vc_7 478 515 13525 13562 F 38 100.00 515 reject_low 7 ALIGNMENT 41 YS2-14i08.q1k vc_4 475 515 5831 5871 F 41 100.00 515 reject_low 5 ALIGNMENT 426 YS2-14i08.q1k chr07 40 476 107060 107496 F 437 99.54 515 accept_chi 0 ALIGNMENT 0 YS2-14i09.q1k vc_5 376 92 5064 5063 C 285 0.00 415 reject_low 5 ALIGNMENT 39 YS2-14i09.q1k vc_5 415 377 5025 5063 C 39 100.00 415 reject_low 5 ALIGNMENT 38 YS2-14i09.q1k vc_7 378 415 13525 13562 F 38 100.00 415 reject_low 6 ALIGNMENT 0 YS2-14i09.q1k vc_4 92 373 5830 5829 F 282 0.00 415 reject_low 4 ALIGNMENT 0 YS2-14i09.q1k vc_7 92 377 13525 13524 F 286 0.00 415 reject_low 6 ALIGNMENT 36 YS2-14i09.q1k vc_5 412 377 1 36 C 36 100.00 415 reject_low 7 ALIGNMENT 280 YS2-14i09.q1k chr16 40 374 900808 901146 F 335 94.93 415 accept_chi 1 ALIGNMENT 42 YS2-14i09.q1k vc_3 415 374 2472 2513 C 42 100.00 415 reject_low 3 ALIGNMENT 42 YS2-14i09.q1k vc_4 374 415 5830 5871 F 42 100.00 415 reject_low 4 ALIGNMENT 0 YS2-14i09.q1k vc_5 376 92 37 36 C 285 0.00 415 reject_low 7 ALIGNMENT 299 YS2-14i09.p1k chr16 371 34 900808 901146 C 338 96.45 390 accept_chi 0 ALIGNMENT 0 YS2-14i09.p1k chr16 390 372 900809 900808 C 19 0.00 390 accept_chi 0 ALIGNMENT 0 YS2-14i09.q1k chr16 375 415 901146 901145 F 41 0.00 415 accept_chi 1 ALIGNMENT 42 YS2-14i09.q1k vc_1 415 374 2472 2513 C 42 100.00 415 reject_low 2 ALIGNMENT 0 YS2-14i09.q1k vc_3 373 92 2514 2513 C 282 0.00 415 reject_low 3 ALIGNMENT 0 YS2-14i09.q1k vc_1 373 92 2514 2513 C 282 0.00 415 reject_low 2 ALIGNMENT 0 YS2-14i10.q1k vc_1 826 62 2513 2512 C 765 0.00 1416 reject_low 17 ALIGNMENT 41 YS2-14i10.q1k vc_2 867 827 2105 2145 C 41 100.00 1416 reject_low 18 ALIGNMENT 755 YS2-14i10.p1k chr04 812 25 1298647 1299435 C 788 99.87 1339 accept_chi 0 ALIGNMENT 0 YS2-14i10.p1k vc_5 829 62 5026 5025 C 768 0.00 1339 reject_low 2 ALIGNMENT 106 YS2-14i10.p1k vc_6 1054 1306 3585 3849 F 253 83.00 1339 reject_low 13 ALIGNMENT 0 YS2-14i10.q1k vc_3 62 866 2531 2530 F 805 0.00 1416 reject_low 11 ALIGNMENT 0 YS2-14i10.p1k vc_3 829 62 2473 2472 C 768 0.00 1339 reject_low 24 ALIGNMENT 0 YS2-14i10.q1k vc_4 62 826 5831 5830 F 765 0.00 1416 reject_low 15 ALIGNMENT 0 YS2-14i10.q1k vc_4 866 62 1535 1534 C 805 0.00 1416 reject_low 16 ALIGNMENT 0 YS2-14i10.q1k vc_5 828 62 37 36 C 767 0.00 1416 reject_low 22 ALIGNMENT 0 YS2-14i10.q1k vc_5 62 866 2398 2397 F 805 0.00 1416 reject_low 2 ALIGNMENT 299 YS2-14i10.p1k vc_5 1306 830 4532 5025 C 477 88.68 1339 reject_low 2 ALIGNMENT 141 YS2-14i10.q1k vc_4 867 1025 6353 6514 F 159 97.48 1416|1,0 reject_low 15 ALIGNMENT 41 YS2-14i10.q1k vc_4 827 867 5831 5871 F 41 100.00 1416 reject_low 15 ALIGNMENT 79 YS2-14i10.q1k vc_4 954 867 1446 1534 C 88 97.73 1416 reject_low 16 ALIGNMENT 209 YS2-14i10.q1k vc_2 867 1202 2164 2512 F 336 89.58 1416 reject_low 10 ALIGNMENT 0 YS2-14i10.q1k vc_2 826 62 2146 2145 C 765 0.00 1416 reject_low 18 ALIGNMENT 0 YS2-14i10.q1k vc_4 868 867 5872 6353 F 0 0.00 1416 reject_low 15 ALIGNMENT 745 YS2-14i10.q1k chr04 38 826 1298647 1299435 F 789 99.37 1416 accept_chi 1 ALIGNMENT 0 YS2-14i10.p1k vc_1 829 62 2473 2472 C 768 0.00 1339 reject_low 23 ALIGNMENT 299 YS2-14i10.p1k vc_1 1306 830 1612 2105 C 477 88.68 1339 reject_low 4 ALIGNMENT 299 YS2-14i10.p1k vc_2 1306 830 1612 2105 C 477 88.68 1339 reject_low 5 ALIGNMENT 0 YS2-14i10.q1k vc_1 62 866 2531 2530 F 805 0.00 1416 reject_low 9 ALIGNMENT 299 YS2-14i10.p1k vc_7 830 1306 13562 14055 F 477 89.10 1339 reject_low 7 ALIGNMENT 36 YS2-14i10.q1k vc_5 864 829 1 36 C 36 100.00 1416 reject_low 22 ALIGNMENT 141 YS2-14i10.q1k vc_4 867 1025 126 287 F 159 97.48 1416 reject_low 14 ALIGNMENT 0 YS2-14i10.p1k chr04 843 813 1298648 1298647 C 31 0.00 1339 accept_chi 0 ALIGNMENT 41 YS2-14i10.q1k vc_3 867 827 2472 2512 C 41 100.00 1416 reject_low 19 ALIGNMENT 0 YS2-14i10.q1k vc_7 866 62 2728 2727 C 805 0.00 1416 reject_low 3 ALIGNMENT 299 YS2-14i10.p1k vc_7 830 1306 100 593 F 477 89.10 1339 reject_low 3 ALIGNMENT 209 YS2-14i10.q1k vc_7 1202 867 2379 2727 C 336 89.58 1416 reject_low 3 ALIGNMENT 0 YS2-14i10.p1k vc_7 62 829 100 99 F 768 0.00 1339 reject_low 3 ALIGNMENT 202 YS2-14i10.q1k vc_4 1202 867 5462 5812 C 336 88.99 1416 reject_low 12 ALIGNMENT 26 YS2-14i10.p1k vc_1 860 830 2441 2472 C 31 96.77 1339 reject_low 23 ALIGNMENT 0 YS2-14i10.q1k vc_5 828 62 5064 5063 C 767 0.00 1416 reject_low 20 ALIGNMENT 0 YS2-14i10.p1k vc_4 62 829 5871 5870 F 768 0.00 1339 reject_low 8 ALIGNMENT 38 YS2-14i10.q1k vc_7 830 867 13525 13562 F 38 100.00 1416 reject_low 21 ALIGNMENT 0 YS2-14i10.q1k vc_4 62 866 126 125 F 805 0.00 1416 reject_low 14 ALIGNMENT 209 YS2-14i10.q1k vc_3 867 1202 2531 2879 F 336 89.58 1416 reject_low 11 ALIGNMENT 0 YS2-14i10.q1k vc_7 62 829 13525 13524 F 768 0.00 1416 reject_low 21 ALIGNMENT 0 YS2-14i10.p1k vc_6 62 1053 3585 3584 F 992 0.00 1339 reject_low 13 ALIGNMENT 209 YS2-14i10.q1k vc_5 867 1202 2398 2746 F 336 89.58 1416 reject_low 2 ALIGNMENT 0 YS2-14i10.q1k vc_4 866 62 5813 5812 C 805 0.00 1416 reject_low 12 ALIGNMENT 209 YS2-14i10.q1k vc_1 867 1202 2531 2879 F 336 89.58 1416 reject_low 9 ALIGNMENT 257 YS2-14i10.p1k vc_4 830 1156 5871 6206 F 327 93.58 1339 reject_low 8 ALIGNMENT 0 YS2-14i10.q1k vc_3 826 62 2513 2512 C 765 0.00 1416 reject_low 19 ALIGNMENT 26 YS2-14i10.p1k vc_3 860 830 2441 2472 C 31 96.77 1339 reject_low 24 ALIGNMENT 0 YS2-14i10.p1k vc_7 62 829 13562 13561 F 768 0.00 1339 reject_low 7 ALIGNMENT 0 YS2-14i10.p1k vc_3 829 62 2106 2105 C 768 0.00 1339 reject_low 6 ALIGNMENT 41 YS2-14i10.q1k vc_1 867 827 2472 2512 C 41 100.00 1416 reject_low 17 ALIGNMENT 0 YS2-14i10.p1k vc_2 829 62 2106 2105 C 768 0.00 1339 reject_low 5 ALIGNMENT 0 YS2-14i10.q1k vc_2 62 866 2164 2163 F 805 0.00 1416 reject_low 10 ALIGNMENT 299 YS2-14i10.p1k vc_3 1306 830 1612 2105 C 477 88.68 1339 reject_low 6 ALIGNMENT 0 YS2-14i10.p1k vc_1 829 62 2106 2105 C 768 0.00 1339 reject_low 4 ALIGNMENT 39 YS2-14i10.q1k vc_5 867 829 5025 5063 C 39 100.00 1416 reject_low 20 ALIGNMENT 998 YS2-14i11.p1k chr07 1189 42 966494 967660 C 1148 97.30 1257 accept 0 ALIGNMENT 941 YS2-14i11.q1k chr07 37 1102 962040 963127 F 1066 97.37 1333 accept 0 ALIGNMENT 0 YS2-14i12.q1k chr12 528 62 109204 109203 C 467 0.00 1475 reject_low 2 ALIGNMENT 395 YS2-14i12.q1k chr12 331 751 108978 109398 F 421 98.57 1475 reject_low 1 ALIGNMENT 971 YS2-14i12.q1k chr12 40 1206 108686 109860 F 1167 94.77 1475 accept 0 ALIGNMENT 1000 YS2-14i12.p1k chr12 1198 30 112838 114016 C 1169 95.47 1315 accept 0 ALIGNMENT 0 YS2-14i12.q1k chr12 752 834 109398 109397 F 83 0.00 1475 reject_low 1 ALIGNMENT 25 YS2-14i12.q1k chr12 556 529 109176 109203 C 28 100.00 1475 reject_low 2 ALIGNMENT 0 YS2-14i12.q1k chr12 62 330 108978 108977 F 269 0.00 1475 reject_low 1 ALIGNMENT 0 YS2-14i12.q1k chr12 834 557 109177 109176 C 278 0.00 1475 reject_low 2 ALIGNMENT 38 YS2-14i14.q1k vc_5 218 181 1 38 C 38 100.00 221 reject_low 7 ALIGNMENT 0 YS2-14i14.q1k vc_1 182 62 2511 2510 C 121 0.00 221 reject_low 3 ALIGNMENT 39 YS2-14i14.q1k vc_3 221 183 2472 2510 C 39 100.00 221 reject_low 4 ALIGNMENT 0 YS2-14i14.q1k vc_5 180 62 39 38 C 119 0.00 221 reject_low 7 ALIGNMENT 0 YS2-14i14.q1k chr07 221 183 518290 518289 C 39 0.00 221 accept_chi 1 ALIGNMENT 0 YS2-14i14.q1k vc_3 182 62 2511 2510 C 121 0.00 221 reject_low 4 ALIGNMENT 0 YS2-14i14.q1k vc_7 62 183 13525 13524 F 122 0.00 221 reject_low 6 ALIGNMENT 38 YS2-14i14.q1k vc_7 184 221 13525 13562 F 38 100.00 221 reject_low 6 ALIGNMENT 152 YS2-14i14.q1k chr07 182 30 518289 518441 C 153 100.00 221 accept_chi 1 ALIGNMENT 0 YS2-14i14.q1k vc_4 62 182 5833 5832 F 121 0.00 221 reject_low 5 ALIGNMENT 152 YS2-14i14.p1k chr07 31 183 518289 518441 F 153 100.00 201 accept_chi 0 ALIGNMENT 41 YS2-14i14.q1k vc_5 221 181 5025 5065 C 41 100.00 221 reject_low 2 ALIGNMENT 39 YS2-14i14.q1k vc_4 183 221 5833 5871 F 39 100.00 221 reject_low 5 ALIGNMENT 0 YS2-14i14.q1k vc_5 180 62 5066 5065 C 119 0.00 221 reject_low 2 ALIGNMENT 39 YS2-14i14.q1k vc_1 221 183 2472 2510 C 39 100.00 221 reject_low 3 ALIGNMENT 0 YS2-14i14.p1k chr07 184 201 518441 518440 F 18 0.00 201 accept_chi 0 ALIGNMENT 943 YS2-14i15.p1k chr15 1219 37 71089 72265 C 1183 95.01 1345 accept 0 ALIGNMENT 946 YS2-14i15.q1k chr15 48 1230 65938 67123 F 1183 94.93 1376 accept 0 ALIGNMENT 1009 YS2-14i16.q1k chr05 46 1187 74235 75394 F 1142 96.85 1400 accept 0 ALIGNMENT 990 YS2-14i16.p1k chr05 1141 31 76166 77287 C 1111 97.30 1373 accept 0 ALIGNMENT 82 YS2-14i17.p1k chr03 1103 955 168929 169083 C 149 87.92 1304 reject_low 27 ALIGNMENT 114 YS2-14i17.p1k chr14 1202 973 726339 726575 C 230 85.22 1304 reject_low 13 ALIGNMENT 0 YS2-14i17.q1k chr11 223 92 202634 202633 C 132 0.00 1333 reject_low 15 ALIGNMENT 302 YS2-14i17.q1k chr04 228 567 668091 668431 F 340 97.65 1333 reject_low 11 ALIGNMENT 0 YS2-14i17.q1k chr04 92 227 1023131 1023130 F 136 0.00 1333 reject_low 20 ALIGNMENT 0 YS2-14i17.q1k chr16 569 818 856882 856881 F 250 0.00 1333 reject_low 8 ALIGNMENT 0 YS2-14i17.q1k chr01 92 225 182612 182611 F 134 0.00 1333 reject_low 3 ALIGNMENT 0 YS2-14i17.p1k chr04 96 972 945949 945948 F 877 0.00 1304 reject_low 26 ALIGNMENT 114 YS2-14i17.p1k chr12 1202 971 374104 374341 C 232 84.91 1304 reject_low 12 ALIGNMENT 0 YS2-14i17.q1k chr14 92 224 726232 726231 F 133 0.00 1333 reject_low 13 ALIGNMENT 0 YS2-14i17.q1k chr14 92 363 546561 546560 F 272 0.00 1333 reject_low 28 ALIGNMENT 0 YS2-14i17.q1k chr16 568 818 769657 769656 F 251 0.00 1333 reject_low 1 ALIGNMENT 0 YS2-14i17.q1k chr14 92 227 546739 546738 F 136 0.00 1333 reject_low 2 ALIGNMENT 0 YS2-14i17.p1k chr12 970 96 374342 374341 C 875 0.00 1304 reject_low 12 ALIGNMENT 303 YS2-14i17.q1k chr15 228 567 854273 854612 F 340 97.94 1333 reject_low 19 ALIGNMENT 305 YS2-14i17.q1k chr04 567 228 945949 946289 C 340 97.94 1333 reject_low 18 ALIGNMENT 0 YS2-14i17.q1k chr07 92 227 707199 707198 F 136 0.00 1333 reject_low 4 ALIGNMENT 0 YS2-14i17.q1k chr15 92 227 854273 854272 F 136 0.00 1333 reject_low 19 ALIGNMENT 304 YS2-14i17.q1k chr16 238 568 856551 856882 F 331 98.79 1333 reject_low 8 ALIGNMENT 0 YS2-14i17.p1k chr05 96 972 434627 434626 F 877 0.00 1304 reject_low 22 ALIGNMENT 0 YS2-14i17.q1k chr08 223 92 146669 146668 C 132 0.00 1333 reject_low 16 ALIGNMENT 0 YS2-14i17.p1k chr02 972 96 198058 198057 C 877 0.00 1304 reject_low 9 ALIGNMENT 114 YS2-14i17.p1k chr07 967 1202 319420 319661 F 236 84.75 1304 reject_low 23 ALIGNMENT 0 YS2-14i17.q1k chr07 568 818 736327 736326 F 251 0.00 1333 reject_low 10 ALIGNMENT 0 YS2-14i17.q1k chr02 568 818 198057 198056 F 251 0.00 1333 reject_low 9 ALIGNMENT 114 YS2-14i17.p1k chr16 1202 973 769421 769657 C 230 85.22 1304 reject_low 1 ALIGNMENT 0 YS2-14i17.q1k chr02 92 227 197717 197716 F 136 0.00 1333 reject_low 9 ALIGNMENT 306 YS2-14i17.q1k chr07 227 567 735986 736327 F 341 97.95 1333 reject_low 10 ALIGNMENT 0 YS2-14i17.q1k chr12 92 227 374000 373999 F 136 0.00 1333 reject_low 12 ALIGNMENT 324 YS2-14i17.q1k chr09 228 567 210305 210644 F 340 99.71 1333 reject_low 7 ALIGNMENT 0 YS2-14i17.p1k chr09 972 96 205557 205556 C 877 0.00 1304 reject_low 6 ALIGNMENT 0 YS2-14i17.q1k chr07 92 227 712210 712209 F 136 0.00 1333 reject_low 5 ALIGNMENT 122 YS2-14i17.p1k chr11 969 1202 202286 202525 F 234 85.90 1304 reject_low 21 ALIGNMENT 0 YS2-14i17.q1k chr01 568 818 182953 182952 F 251 0.00 1333 reject_low 3 ALIGNMENT 0 YS2-14i17.q1k chr14 476 818 546674 546673 F 343 0.00 1333 reject_low 28 ALIGNMENT 293 YS2-14i17.q1k chr14 225 567 726232 726575 F 343 96.50 1333 reject_low 13 ALIGNMENT 0 YS2-14i17.p1k chr05 96 972 492434 492433 F 877 0.00 1304 reject_low 25 ALIGNMENT 325 YS2-14i17.q1k chr11 571 224 202286 202633 C 348 99.14 1333 reject_low 15 ALIGNMENT 0 YS2-14i17.q1k chr04 818 568 945950 945949 C 251 0.00 1333 reject_low 18 ALIGNMENT 125 YS2-14i17.p1k chr14 1202 972 546843 547079 C 231 86.58 1304 reject_low 2 ALIGNMENT 117 YS2-14i17.p1k chr05 973 1202 492434 492670 F 230 85.65 1304 reject_low 25 ALIGNMENT 326 YS2-14i17.q1k chr01 226 567 182612 182953 F 342 99.71 1333 reject_low 3 ALIGNMENT 0 YS2-14i17.q1k chr04 92 227 668091 668090 F 136 0.00 1333 reject_low 11 ALIGNMENT 0 YS2-14i17.q1k chr05 226 92 434969 434968 C 135 0.00 1333 reject_low 17 ALIGNMENT 306 YS2-14i17.q1k chr08 571 224 146320 146668 C 348 97.41 1333 reject_low 16 ALIGNMENT 114 YS2-14i17.p1k chr07 1202 973 736091 736327 C 230 85.22 1304 reject_low 10 ALIGNMENT 0 YS2-14i17.p1k chr01 972 96 182954 182953 C 877 0.00 1304 reject_low 3 ALIGNMENT 0 YS2-14i17.q1k chr12 570 818 374341 374340 F 249 0.00 1333 reject_low 12 ALIGNMENT 305 YS2-14i17.q1k chr02 228 567 197717 198057 F 340 97.94 1333 reject_low 9 ALIGNMENT 117 YS2-14i17.p1k chr02 1202 973 197821 198057 C 230 85.65 1304 reject_low 9 ALIGNMENT 0 YS2-14i17.p1k chr14 972 96 726576 726575 C 877 0.00 1304 reject_low 13 ALIGNMENT 23 YS2-14i17.q1k chr14 364 475 546561 546674 F 112 75.89 1333 reject_low 28 ALIGNMENT 0 YS2-14i17.p1k chr05 96 972 249929 249928 F 877 0.00 1304 reject_low 24 ALIGNMENT 0 YS2-14i17.q1k chr14 569 818 547079 547078 F 250 0.00 1333 reject_low 2 ALIGNMENT 306 YS2-14i17.q1k chr05 567 227 434627 434968 C 341 97.95 1333 reject_low 17 ALIGNMENT 0 YS2-14i17.q1k chr15 568 818 854612 854611 F 251 0.00 1333 reject_low 19 ALIGNMENT 296 YS2-14i17.q1k chr04 228 567 1023131 1023471 F 340 97.06 1333 reject_low 20 ALIGNMENT 121 YS2-14i17.p1k chr09 1202 973 205321 205556 C 230 86.09 1304 reject_low 6 ALIGNMENT 0 YS2-14i17.q1k chr09 92 227 205217 205216 F 136 0.00 1333 reject_low 6 ALIGNMENT 177 YS2-14i17.q1k chr12 228 34 875358 875552 C 195 97.44 1333 reject_bad_break 0 ALIGNMENT 114 YS2-14i17.p1k chr04 973 1202 945949 946185 F 230 85.22 1304 reject_low 26 ALIGNMENT 0 YS2-14i17.q1k chr07 818 574 319421 319420 C 245 0.00 1333 reject_low 14 ALIGNMENT 0 YS2-14i17.p1k chr07 96 966 319420 319419 F 871 0.00 1304 reject_low 23 ALIGNMENT 0 YS2-14i17.p1k chr07 972 96 736328 736327 C 877 0.00 1304 reject_low 10 ALIGNMENT 308 YS2-14i17.q1k chr07 573 222 319420 319771 C 352 97.16 1333 reject_low 14 ALIGNMENT 0 YS2-14i17.q1k chr09 568 818 210644 210643 F 251 0.00 1333 reject_low 7 ALIGNMENT 0 YS2-14i17.q1k chr04 568 818 1023471 1023470 F 251 0.00 1333 reject_low 20 ALIGNMENT 120 YS2-14i17.p1k chr05 973 1202 434627 434863 F 230 86.09 1304 reject_low 22 ALIGNMENT 121 YS2-14i17.p1k chr07 1202 973 712314 712549 C 230 86.09 1304 reject_low 5 ALIGNMENT 0 YS2-14i17.q1k chr07 568 818 712549 712548 F 251 0.00 1333 reject_low 5 ALIGNMENT 0 YS2-14i17.q1k chr11 818 572 202287 202286 C 247 0.00 1333 reject_low 15 ALIGNMENT 0 YS2-14i17.p1k chr16 972 96 769658 769657 C 877 0.00 1304 reject_low 1 ALIGNMENT 121 YS2-14i17.p1k chr07 1202 973 707303 707538 C 230 86.09 1304 reject_low 4 ALIGNMENT 0 YS2-14i17.q1k chr14 568 818 726575 726574 F 251 0.00 1333 reject_low 13 ALIGNMENT 0 YS2-14i17.q1k chr05 818 568 434628 434627 C 251 0.00 1333 reject_low 17 ALIGNMENT 0 YS2-14i17.p1k chr04 972 96 668432 668431 C 877 0.00 1304 reject_low 11 ALIGNMENT 418 YS2-14i17.q1k chr16 102 567 769191 769657 F 466 97.64 1333 reject_low 1 ALIGNMENT 0 YS2-14i17.q1k chr16 92 237 856551 856550 F 146 0.00 1333 reject_low 8 ALIGNMENT 0 YS2-14i17.q1k chr08 818 572 146321 146320 C 247 0.00 1333 reject_low 16 ALIGNMENT 0 YS2-14i17.q1k chr09 92 227 210305 210304 F 136 0.00 1333 reject_low 7 ALIGNMENT 121 YS2-14i17.p1k chr09 1202 973 210409 210644 C 230 86.09 1304 reject_low 7 ALIGNMENT 0 YS2-14i17.q1k chr12 567 229 875364 875357 C 339 0.00 1333 reject_bad_break 0 ALIGNMENT 0 YS2-14i17.q1k chr07 221 92 319772 319771 C 130 0.00 1333 reject_low 14 ALIGNMENT 118 YS2-14i17.p1k chr16 1202 972 856645 856882 C 231 85.71 1304 reject_low 8 ALIGNMENT 324 YS2-14i17.q1k chr07 228 567 707199 707538 F 340 99.71 1333 reject_low 4 ALIGNMENT 0 YS2-14i17.q1k chr04 227 92 946290 946289 C 136 0.00 1333 reject_low 18 ALIGNMENT 121 YS2-14i17.p1k chr01 1202 973 182718 182953 C 230 86.09 1304 reject_low 3 ALIGNMENT 0 YS2-14i17.p1k chr11 96 968 202286 202285 F 873 0.00 1304 reject_low 21 ALIGNMENT 0 YS2-14i17.q1k chr09 568 818 205556 205555 F 251 0.00 1333 reject_low 6 ALIGNMENT 324 YS2-14i17.q1k chr09 228 567 205217 205556 F 340 99.71 1333 reject_low 6 ALIGNMENT 0 YS2-14i17.p1k chr14 971 96 547080 547079 C 876 0.00 1304 reject_low 2 ALIGNMENT 298 YS2-14i17.q1k chr12 228 569 374000 374341 F 342 97.37 1333 reject_low 12 ALIGNMENT 0 YS2-14i17.q1k chr07 92 226 735986 735985 F 135 0.00 1333 reject_low 10 ALIGNMENT 0 YS2-14i17.q1k chr07 568 818 707538 707537 F 251 0.00 1333 reject_low 4 ALIGNMENT 0 YS2-14i17.p1k chr09 972 96 210645 210644 C 877 0.00 1304 reject_low 7 ALIGNMENT 0 YS2-14i17.q1k chr04 568 818 668431 668430 F 251 0.00 1333 reject_low 11 ALIGNMENT 324 YS2-14i17.q1k chr07 228 567 712210 712549 F 340 99.71 1333 reject_low 5 ALIGNMENT 0 YS2-14i17.p1k chr03 954 96 169084 169083 C 859 0.00 1304 reject_low 27 ALIGNMENT 882 YS2-14i17.p1k chr12 35 972 874426 875363 F 938 98.51 1304 reject_bad_break 0 ALIGNMENT 505 YS2-14i17.q1k chr12 1180 568 874748 875363 C 613 94.94 1333 reject_bad_break 0 ALIGNMENT 0 YS2-14i17.p1k chr16 971 96 856883 856882 C 876 0.00 1304 reject_low 8 ALIGNMENT 328 YS2-14i17.q1k chr14 228 568 546739 547079 F 341 100.00 1333 reject_low 2 ALIGNMENT 117 YS2-14i17.p1k chr05 973 1202 249929 250165 F 230 85.65 1304 reject_low 24 ALIGNMENT 0 YS2-14i17.p1k chr07 972 96 712550 712549 C 877 0.00 1304 reject_low 5 ALIGNMENT 0 YS2-14i17.p1k chr07 972 96 707539 707538 C 877 0.00 1304 reject_low 4 ALIGNMENT 114 YS2-14i17.p1k chr04 1202 973 668195 668431 C 230 85.22 1304 reject_low 11 ALIGNMENT 632 YS2-14i18.p1k chr16 30 714 871870 872555 F 685 99.12 1348 reject_low 1 ALIGNMENT 349 YS2-14i18.p1k chr06 1191 714 199366 199849 C 478 93.31 1348 accept 0 ALIGNMENT 1054 YS2-14i18.q1k chr06 31 1187 195400 196566 F 1157 97.41 1374 accept 0 ALIGNMENT 0 YS2-14i18.p1k chr16 715 901 872555 872554 F 187 0.00 1348 reject_low 1 ALIGNMENT 0 YS2-14i18.p1k chr06 713 62 199850 199849 C 652 0.00 1348 accept 0 ALIGNMENT 1039 YS2-14i19.q1k chr09 1325 51 243603 244878 C 1275 94.51 1362 accept 0 ALIGNMENT 1059 YS2-14i19.p1k chr09 35 1234 241187 242374 F 1200 96.83 1256 accept 0 ALIGNMENT 46 YS2-14i20.q1k vc_4 1125 1039 1446 1534 C 87 86.21 1341 reject_low 14 ALIGNMENT 62 YS2-14i20.q1k vc_4 1039 1162 6353 6480 F 124 84.68 1341 reject_low 13 ALIGNMENT 34 YS2-14i20.q1k vc_5 1034 1001 3 36 C 34 100.00 1341 reject_low 31 ALIGNMENT 0 YS2-14i20.q1k vc_1 62 1038 2531 2530 F 977 0.00 1341 reject_low 9 ALIGNMENT 0 YS2-14i20.q1k vc_4 1038 62 1535 1534 C 977 0.00 1341 reject_low 14 ALIGNMENT 33 YS2-14i20.q1k vc_7 1002 1034 13525 13557 F 33 100.00 1341 reject_low 33 ALIGNMENT 127 YS2-14i20.p1k vc_7 1012 1259 100 348 F 248 86.29 1295 reject_low 7 ALIGNMENT 127 YS2-14i20.p1k vc_5 1259 1012 4777 5025 C 248 86.29 1295 reject_low 2 ALIGNMENT 127 YS2-14i20.p1k vc_3 1259 1012 1857 2105 C 248 86.29 1295 reject_low 5 ALIGNMENT 36 YS2-14i20.q1k vc_1 1034 999 2477 2512 C 36 100.00 1341 reject_low 27 ALIGNMENT 0 YS2-14i20.p1k chr12 870 200 875365 875364 C 671 0.00 1295 reject_low 18 ALIGNMENT 0 YS2-14i20.p1k vc_3 1011 62 2106 2105 C 950 0.00 1295 reject_low 5 ALIGNMENT 0 YS2-14i20.q1k chr12 62 823 875364 875363 F 762 0.00 1341 reject_low 24 ALIGNMENT 0 YS2-14i20.q1k vc_4 62 1038 126 125 F 977 0.00 1341 reject_low 11 ALIGNMENT 100 YS2-14i20.q1k chr16 943 821 769191 769314 C 123 95.12 1341 reject_low 22 ALIGNMENT 36 YS2-14i20.q1k vc_4 999 1034 5831 5866 F 36 100.00 1341 reject_low 13 ALIGNMENT 62 YS2-14i20.q1k vc_4 1162 1039 5685 5812 C 124 85.48 1341 reject_low 12 ALIGNMENT 854 YS2-14i20.q1k chr04 31 994 358772 359735 F 964 97.41 1341 accept_chi 1 ALIGNMENT 62 YS2-14i20.q1k vc_1 1039 1162 2531 2658 F 124 84.68 1341 reject_low 9 ALIGNMENT 26 YS2-14i20.p1k vc_1 1042 1012 2441 2472 C 31 96.77 1295 reject_low 29 ALIGNMENT 99 YS2-14i20.q1k chr12 824 945 875364 875486 F 122 95.08 1341 reject_low 24 ALIGNMENT 0 YS2-14i20.p1k chr15 80 62 438752 438751 C 19 0.00 1295 reject_low 17 ALIGNMENT 0 YS2-14i20.p1k chr11 79 62 578717 578716 C 18 0.00 1295 reject_low 15 ALIGNMENT 62 YS2-14i20.q1k vc_3 1039 1162 2531 2658 F 124 84.68 1341 reject_low 10 ALIGNMENT 118 YS2-14i20.p1k chr15 202 81 438630 438751 C 122 99.18 1295 reject_low 17 ALIGNMENT 0 YS2-14i20.q1k vc_5 1000 62 37 36 C 939 0.00 1341 reject_low 31 ALIGNMENT 875 YS2-14i20.p1k chr04 993 29 358772 359735 C 965 97.93 1295 accept_chi 0 ALIGNMENT 0 YS2-14i20.q1k chr07 824 62 701063 701062 C 763 0.00 1341 reject_low 26 ALIGNMENT 0 YS2-14i20.q1k chr07 62 821 115479 115478 F 760 0.00 1341 reject_low 25 ALIGNMENT 0 YS2-14i20.p1k chr07 199 870 701062 701061 F 672 0.00 1295 reject_low 20 ALIGNMENT 0 YS2-14i20.p1k chr07 62 79 700945 700944 F 18 0.00 1295 reject_low 20 ALIGNMENT 0 YS2-14i20.q1k vc_5 62 1038 2398 2397 F 977 0.00 1341 reject_low 2 ALIGNMENT 118 YS2-14i20.p1k chr11 202 80 578593 578716 C 123 99.19 1295 reject_low 15 ALIGNMENT 0 YS2-14i20.p1k chr16 203 870 769314 769313 F 668 0.00 1295 reject_low 16 ALIGNMENT 0 YS2-14i20.p1k chr11 870 203 578594 578593 C 668 0.00 1295 reject_low 15 ALIGNMENT 0 YS2-14i20.q1k chr15 62 820 438630 438629 F 759 0.00 1341 reject_low 23 ALIGNMENT 0 YS2-14i20.p1k vc_7 62 1011 100 99 F 950 0.00 1295 reject_low 7 ALIGNMENT 0 YS2-14i20.p1k chr12 77 62 875487 875486 C 16 0.00 1295 reject_low 18 ALIGNMENT 0 YS2-14i20.p1k vc_5 1011 62 5026 5025 C 950 0.00 1295 reject_low 2 ALIGNMENT 62 YS2-14i20.q1k vc_5 1039 1162 2398 2525 F 124 84.68 1341 reject_low 2 ALIGNMENT 0 YS2-14i20.p1k chr07 870 202 115480 115479 C 669 0.00 1295 reject_low 19 ALIGNMENT 117 YS2-14i20.p1k chr12 199 78 875364 875486 C 122 99.18 1295 reject_low 18 ALIGNMENT 118 YS2-14i20.p1k chr16 80 202 769191 769314 F 123 99.19 1295 reject_low 16 ALIGNMENT 127 YS2-14i20.p1k vc_1 1259 1012 1857 2105 C 248 86.29 1295 reject_low 3 ALIGNMENT 0 YS2-14i20.q1k vc_4 62 998 5831 5830 F 937 0.00 1341 reject_low 13 ALIGNMENT 0 YS2-14i20.q1k vc_3 998 62 2513 2512 C 937 0.00 1341 reject_low 28 ALIGNMENT 26 YS2-14i20.p1k vc_3 1042 1012 2441 2472 C 31 96.77 1295 reject_low 30 ALIGNMENT 0 YS2-14i20.p1k chr16 62 79 769191 769190 F 18 0.00 1295 reject_low 16 ALIGNMENT 127 YS2-14i20.p1k vc_4 1012 1259 5871 6119 F 248 86.29 1295 reject_low 6 ALIGNMENT 0 YS2-14i20.p1k vc_2 1011 62 2106 2105 C 950 0.00 1295 reject_low 4 ALIGNMENT 115 YS2-14i20.p1k chr07 201 78 115479 115601 C 124 98.39 1295 reject_low 19 ALIGNMENT 36 YS2-14i20.q1k vc_3 1034 999 2477 2512 C 36 100.00 1341 reject_low 28 ALIGNMENT 92 YS2-14i20.q1k chr07 943 825 700945 701062 C 119 94.12 1341 reject_low 26 ALIGNMENT 0 YS2-14i20.q1k vc_3 62 1038 2531 2530 F 977 0.00 1341 reject_low 10 ALIGNMENT 62 YS2-14i20.q1k vc_4 1039 1162 126 253 F 124 84.68 1341 reject_low 11 ALIGNMENT 0 YS2-14i20.p1k vc_1 1011 62 2106 2105 C 950 0.00 1295 reject_low 3 ALIGNMENT 0 YS2-14i20.q1k chr16 820 62 769315 769314 C 759 0.00 1341 reject_low 22 ALIGNMENT 0 YS2-14i20.p1k vc_4 62 1011 5871 5870 F 950 0.00 1295 reject_low 6 ALIGNMENT 0 YS2-14i20.q1k vc_1 998 62 2513 2512 C 937 0.00 1341 reject_low 27 ALIGNMENT 100 YS2-14i20.q1k chr15 821 942 438630 438751 F 122 95.08 1341 reject_low 23 ALIGNMENT 34 YS2-14i20.q1k vc_5 1034 1001 5030 5063 C 34 100.00 1341 reject_low 32 ALIGNMENT 0 YS2-14i20.q1k vc_5 1000 62 5064 5063 C 939 0.00 1341 reject_low 32 ALIGNMENT 110 YS2-14i20.p1k chr07 80 198 700945 701062 F 119 98.32 1295 reject_low 20 ALIGNMENT 0 YS2-14i20.q1k vc_4 1035 1038 5867 6352 F 4 0.00 1341 reject_low 13 ALIGNMENT 0 YS2-14i20.p1k vc_7 62 1011 13562 13561 F 950 0.00 1295 reject_low 8 ALIGNMENT 0 YS2-14i20.p1k chr07 77 62 115602 115601 C 16 0.00 1295 reject_low 19 ALIGNMENT 127 YS2-14i20.p1k vc_2 1259 1012 1857 2105 C 248 86.29 1295 reject_low 4 ALIGNMENT 0 YS2-14i20.p1k chr15 870 203 438631 438630 C 668 0.00 1295 reject_low 17 ALIGNMENT 0 YS2-14i20.q1k chr11 62 820 578593 578592 F 759 0.00 1341 reject_low 21 ALIGNMENT 0 YS2-14i20.p1k vc_1 1011 62 2473 2472 C 950 0.00 1295 reject_low 29 ALIGNMENT 0 YS2-14i20.q1k vc_4 1038 62 5813 5812 C 977 0.00 1341 reject_low 12 ALIGNMENT 0 YS2-14i20.q1k vc_7 62 1001 13525 13524 F 940 0.00 1341 reject_low 33 ALIGNMENT 127 YS2-14i20.p1k vc_7 1012 1259 13562 13810 F 248 86.29 1295 reject_low 8 ALIGNMENT 0 YS2-14i20.p1k vc_3 1011 62 2473 2472 C 950 0.00 1295 reject_low 30 ALIGNMENT 100 YS2-14i20.q1k chr11 821 943 578593 578716 F 123 95.12 1341 reject_low 21 ALIGNMENT 97 YS2-14i20.q1k chr07 822 945 115479 115601 F 124 94.35 1341 reject_low 25 ALIGNMENT 26 YS2-14i21.q1k chr11 264 313 11153 11202 F 50 84.00 1288 reject_low 1 ALIGNMENT 1053 YS2-14i21.q1k chr15 1254 38 1054620 1055840 C 1217 96.71 1288 accept 0 ALIGNMENT 32 YS2-14i21.q1k chr11 87 171 10977 11060 F 85 80.00 1288 reject_low 1 ALIGNMENT 0 YS2-14i21.q1k chr11 62 86 10977 10976 F 25 0.00 1288 reject_low 1 ALIGNMENT 0 YS2-14i21.q1k chr11 172 263 11061 11152 F 92 0.00 1288 reject_low 1 ALIGNMENT 1079 YS2-14i21.p1k chr15 35 1224 1051365 1052563 F 1190 97.31 1224 accept 0 ALIGNMENT 0 YS2-14i21.q1k chr11 314 875 11202 11201 F 562 0.00 1288 reject_low 1 ALIGNMENT 40 YS2-14i22.q1k vc_1 406 367 2472 2511 C 40 100.00 406 reject_low 2 ALIGNMENT 0 YS2-14i22.q1k vc_1 366 62 2512 2511 C 305 0.00 406 reject_low 2 ALIGNMENT 40 YS2-14i22.q1k vc_3 406 367 2472 2511 C 40 100.00 406 reject_low 3 ALIGNMENT 0 YS2-14i22.q1k vc_5 367 62 5064 5063 C 306 0.00 406 reject_low 5 ALIGNMENT 0 YS2-14i22.q1k vc_7 62 368 63 62 F 307 0.00 406 reject_low 6 ALIGNMENT 315 YS2-14i22.p1k chr12 34 366 157749 158081 F 333 100.00 367 accept_chi 0 ALIGNMENT 0 YS2-14i22.q1k vc_7 62 368 13525 13524 F 307 0.00 406 reject_low 7 ALIGNMENT 38 YS2-14i22.q1k vc_7 369 406 63 100 F 38 100.00 406 reject_low 6 ALIGNMENT 315 YS2-14i22.q1k chr12 366 34 157749 158081 C 333 100.00 406 accept_chi 1 ALIGNMENT 40 YS2-14i22.q1k vc_4 367 406 5832 5871 F 40 100.00 406 reject_low 4 ALIGNMENT 0 YS2-14i22.q1k vc_5 367 62 37 36 C 306 0.00 406 reject_low 8 ALIGNMENT 38 YS2-14i22.q1k vc_7 369 406 13525 13562 F 38 100.00 406 reject_low 7 ALIGNMENT 39 YS2-14i22.q1k vc_5 406 368 5025 5063 C 39 100.00 406 reject_low 5 ALIGNMENT 0 YS2-14i22.q1k chr12 406 367 157750 157749 C 40 0.00 406 accept_chi 1 ALIGNMENT 0 YS2-14i22.q1k vc_3 366 62 2512 2511 C 305 0.00 406 reject_low 3 ALIGNMENT 0 YS2-14i22.q1k vc_4 62 366 5832 5831 F 305 0.00 406 reject_low 4 ALIGNMENT 36 YS2-14i22.q1k vc_5 403 368 1 36 C 36 100.00 406 reject_low 8 ALIGNMENT 945 YS2-14i23.p1k chr13 33 1186 709120 710281 F 1154 95.23 1232 accept 0 ALIGNMENT 954 YS2-14i23.q1k chr13 1245 40 710045 711247 C 1206 95.02 1261 accept 0 ALIGNMENT 1033 YS2-14i24.p1k chr13 26 1210 709120 710314 F 1185 97.38 1256 accept 0 ALIGNMENT 951 YS2-14i24.q1k chr13 1243 37 710054 711247 C 1207 95.03 1306 accept 0 ALIGNMENT 966 YS2-14j01.p1k chr13 34 1212 650672 651865 F 1179 95.59 1378 accept 0 ALIGNMENT 977 YS2-14j01.q1k chr13 1186 38 651952 653122 C 1149 96.52 1366 accept 0 ALIGNMENT 394 YS2-14j02.p1k vc_7 1 604 13918 14527 F 604 89.40 804 reject_vc 7 ALIGNMENT 41 YS2-14j02.q1k vc_1 309 269 2472 2512 C 41 100.00 309 reject_low 9 ALIGNMENT 125 YS2-14j02.q1k chr14 117 269 252059 252211 F 153 94.12 309 manual 8 ALIGNMENT 400 YS2-14j02.p1k vc_3 604 1 1140 1749 C 604 89.57 804 reject_vc 5 ALIGNMENT 0 YS2-14j02.q1k vc_2 268 62 2146 2145 C 207 0.00 309 reject_low 10 ALIGNMENT 41 YS2-14j02.q1k vc_3 309 269 2472 2512 C 41 100.00 309 reject_low 11 ALIGNMENT 0 YS2-14j02.q1k vc_4 62 268 5831 5830 F 207 0.00 309 reject_low 12 ALIGNMENT 36 YS2-14j02.q1k vc_5 306 271 1 36 C 36 100.00 309 reject_low 15 ALIGNMENT 0 YS2-14j02.q1k chr04 270 309 44217 44216 F 40 0.00 309 manual 0 ALIGNMENT 403 YS2-14j02.p1k vc_6 1 604 3712 4321 F 604 89.90 804 reject_vc 2 ALIGNMENT 41 YS2-14j02.q1k vc_2 309 269 2105 2145 C 41 100.00 309 reject_low 10 ALIGNMENT 41 YS2-14j02.q1k vc_4 269 309 5831 5871 F 41 100.00 309 reject_low 12 ALIGNMENT 221 YS2-14j02.q1k chr04 39 269 43986 44217 F 231 99.57 309 manual 0 ALIGNMENT 394 YS2-14j02.p1k vc_7 1 604 456 1065 F 604 89.40 804 reject_vc 6 ALIGNMENT 400 YS2-14j02.p1k vc_2 604 1 1140 1749 C 604 89.57 804 reject_vc 4 ALIGNMENT 38 YS2-14j02.q1k vc_7 272 309 13525 13562 F 38 100.00 309 reject_low 14 ALIGNMENT 0 YS2-14j02.q1k vc_3 268 62 2513 2512 C 207 0.00 309 reject_low 11 ALIGNMENT 0 YS2-14j02.q1k vc_5 270 62 5064 5063 C 209 0.00 309 reject_low 13 ALIGNMENT 0 YS2-14j02.q1k vc_7 62 271 13525 13524 F 210 0.00 309 reject_low 14 ALIGNMENT 39 YS2-14j02.q1k vc_5 309 271 5025 5063 C 39 100.00 309 reject_low 13 ALIGNMENT 400 YS2-14j02.p1k vc_1 604 1 1140 1749 C 604 89.57 804 reject_vc 3 ALIGNMENT 403 YS2-14j02.p1k vc_5 604 1 4060 4669 C 604 89.74 804 reject_vc 1 ALIGNMENT 0 YS2-14j02.q1k chr14 270 309 252211 252210 F 40 0.00 309 manual 8 ALIGNMENT 0 YS2-14j02.q1k vc_1 268 62 2513 2512 C 207 0.00 309 reject_low 9 ALIGNMENT 0 YS2-14j02.q1k chr14 62 116 252059 252058 F 55 0.00 309 manual 8 ALIGNMENT 0 YS2-14j02.q1k vc_5 270 62 37 36 C 209 0.00 309 reject_low 15 ALIGNMENT 40 YS2-14j03.q1k vc_4 284 323 5832 5871 F 40 100.00 323 reject_low 4 ALIGNMENT 0 YS2-14j03.q1k chr02 284 323 380997 380996 F 40 0.00 323 accept_chi 0 ALIGNMENT 0 YS2-14j03.q1k vc_7 62 285 13525 13524 F 224 0.00 323 reject_low 6 ALIGNMENT 39 YS2-14j03.q1k vc_5 323 285 5025 5063 C 39 100.00 323 reject_low 5 ALIGNMENT 0 YS2-14j03.q1k vc_4 62 283 5832 5831 F 222 0.00 323 reject_low 4 ALIGNMENT 0 YS2-14j03.q1k vc_5 284 62 37 36 C 223 0.00 323 reject_low 7 ALIGNMENT 242 YS2-14j03.q1k chr02 30 283 380743 380997 F 254 99.21 323 accept_chi 0 ALIGNMENT 0 YS2-14j03.q1k vc_1 283 62 2512 2511 C 222 0.00 323 reject_low 2 ALIGNMENT 0 YS2-14j03.q1k vc_5 284 62 5064 5063 C 223 0.00 323 reject_low 5 ALIGNMENT 40 YS2-14j03.q1k vc_3 323 284 2472 2511 C 40 100.00 323 reject_low 3 ALIGNMENT 239 YS2-14j03.p1k chr02 283 34 380743 380992 C 250 99.20 301 accept_chi 1 ALIGNMENT 36 YS2-14j03.q1k vc_5 320 285 1 36 C 36 100.00 323 reject_low 7 ALIGNMENT 38 YS2-14j03.q1k vc_7 286 323 13525 13562 F 38 100.00 323 reject_low 6 ALIGNMENT 40 YS2-14j03.q1k vc_1 323 284 2472 2511 C 40 100.00 323 reject_low 2 ALIGNMENT 0 YS2-14j03.q1k vc_3 283 62 2512 2511 C 222 0.00 323 reject_low 3 ALIGNMENT 0 YS2-14j03.p1k chr02 301 284 380744 380743 C 18 0.00 301 accept_chi 1 ALIGNMENT 978 YS2-14j04.p1k chr15 36 1155 719659 720791 F 1120 96.52 1341 accept 0 ALIGNMENT 903 YS2-14j04.q1k chr15 1101 39 724275 725361 C 1063 96.33 1342 accept 0 ALIGNMENT 1015 YS2-14j05.p1k chr15 38 1282 868967 870224 F 1245 94.46 1354 accept 0 ALIGNMENT 993 YS2-14j05.q1k chr15 1140 30 873058 874174 C 1111 97.21 1348 accept 0 ALIGNMENT 929 YS2-14j06.p1k chr15 36 1149 868967 870091 F 1114 95.24 1323 accept 0 ALIGNMENT 1026 YS2-14j06.q1k chr15 1216 30 872975 874174 C 1187 96.04 1392 accept 0 ALIGNMENT 41 YS2-14j07.q1k vc_1 376 336 2472 2512 C 41 100.00 376 reject_low 2 ALIGNMENT 39 YS2-14j07.q1k vc_5 376 338 5025 5063 C 39 100.00 376 reject_low 5 ALIGNMENT 0 YS2-14j07.q1k vc_5 337 62 5064 5063 C 276 0.00 376 reject_low 5 ALIGNMENT 41 YS2-14j07.q1k vc_4 336 376 5831 5871 F 41 100.00 376 reject_low 4 ALIGNMENT 288 YS2-14j07.p1k chr07 330 33 945353 945650 C 298 99.66 348 accept_chi 0 ALIGNMENT 0 YS2-14j07.q1k vc_4 62 335 5831 5830 F 274 0.00 376 reject_low 4 ALIGNMENT 36 YS2-14j07.q1k vc_5 373 338 1 36 C 36 100.00 376 reject_low 7 ALIGNMENT 0 YS2-14j07.p1k chr07 348 331 945354 945353 C 18 0.00 348 accept_chi 0 ALIGNMENT 286 YS2-14j07.q1k chr07 39 336 945353 945650 F 298 99.33 376 accept_chi 1 ALIGNMENT 0 YS2-14j07.q1k vc_3 335 62 2513 2512 C 274 0.00 376 reject_low 3 ALIGNMENT 0 YS2-14j07.q1k chr07 337 376 945650 945649 F 40 0.00 376 accept_chi 1 ALIGNMENT 41 YS2-14j07.q1k vc_3 376 336 2472 2512 C 41 100.00 376 reject_low 3 ALIGNMENT 38 YS2-14j07.q1k vc_7 339 376 13525 13562 F 38 100.00 376 reject_low 6 ALIGNMENT 0 YS2-14j07.q1k vc_7 62 338 13525 13524 F 277 0.00 376 reject_low 6 ALIGNMENT 0 YS2-14j07.q1k vc_1 335 62 2513 2512 C 274 0.00 376 reject_low 2 ALIGNMENT 0 YS2-14j07.q1k vc_5 337 62 37 36 C 276 0.00 376 reject_low 7 ALIGNMENT 952 YS2-14j08.q1k chr12 52 1142 158821 159919 F 1091 95.88 1425 accept 0 ALIGNMENT 912 YS2-14j08.p1k chr12 1114 45 163800 164884 C 1070 95.79 1376 accept 0 ALIGNMENT 964 YS2-14j09.q1k chr02 31 1169 564693 565845 F 1139 95.96 1365 accept 0 ALIGNMENT 1012 YS2-14j09.p1k chr02 1210 25 568089 569288 C 1186 96.12 1326 accept 0 ALIGNMENT 36 YS2-14j10.q1k vc_5 614 579 1 36 C 36 100.00 617 reject_low 7 ALIGNMENT 0 YS2-14j10.q1k vc_5 578 62 5064 5063 C 517 0.00 617 reject_low 5 ALIGNMENT 0 YS2-14j10.q1k vc_3 576 62 2513 2512 C 515 0.00 617 reject_low 3 ALIGNMENT 39 YS2-14j10.q1k vc_5 617 579 5025 5063 C 39 100.00 617 reject_low 5 ALIGNMENT 0 YS2-14j10.q1k vc_4 62 576 5831 5830 F 515 0.00 617 reject_low 4 ALIGNMENT 500 YS2-14j10.p1k chr06 33 581 216151 216695 F 549 98.91 599 accept_chi 0 ALIGNMENT 497 YS2-14j10.q1k chr06 576 32 216151 216691 C 545 98.90 617 accept_chi 1 ALIGNMENT 0 YS2-14j10.q1k vc_1 576 62 2513 2512 C 515 0.00 617 reject_low 2 ALIGNMENT 41 YS2-14j10.q1k vc_3 617 577 2472 2512 C 41 100.00 617 reject_low 3 ALIGNMENT 0 YS2-14j10.p1k chr06 582 599 216695 216694 F 18 0.00 599 accept_chi 0 ALIGNMENT 41 YS2-14j10.q1k vc_4 577 617 5831 5871 F 41 100.00 617 reject_low 4 ALIGNMENT 41 YS2-14j10.q1k vc_1 617 577 2472 2512 C 41 100.00 617 reject_low 2 ALIGNMENT 0 YS2-14j10.q1k vc_7 62 579 13525 13524 F 518 0.00 617 reject_low 6 ALIGNMENT 0 YS2-14j10.q1k chr06 617 577 216152 216151 C 41 0.00 617 accept_chi 1 ALIGNMENT 38 YS2-14j10.q1k vc_7 580 617 13525 13562 F 38 100.00 617 reject_low 6 ALIGNMENT 0 YS2-14j10.q1k vc_5 578 62 37 36 C 517 0.00 617 reject_low 7 ALIGNMENT 907 YS2-14j11.q1k chr15 1095 40 519595 520659 C 1056 96.02 1328 accept 0 ALIGNMENT 865 YS2-14j11.p1k chr15 33 1116 515263 516355 F 1084 93.36 1292 accept 0 ALIGNMENT 1015 YS2-14j13.p1k chr14 40 1253 106222 107440 F 1214 95.30 1259 accept 0 ALIGNMENT 913 YS2-14j13.q1k chr14 1066 30 109323 110370 C 1037 97.20 1317 accept 0 ALIGNMENT 564 YS2-14j14.p1k scplasm1 1 880 940 1835 F 880 89.09 898 accept_chi 1 ALIGNMENT 767 YS2-14j14.q1k scplasm1 1 861 4313 5184 F 861 97.44 1067 accept_chi 0 ALIGNMENT 987 YS2-14j15.q1k chr05 40 1146 74235 75355 F 1107 97.29 1378 accept 0 ALIGNMENT 1026 YS2-14j15.p1k chr05 1210 35 76094 77287 C 1176 97.02 1374 accept 0 ALIGNMENT 249 YS2-14j16.p1k chr11 31 291 59093 59353 F 261 99.23 308 accept_chi 0 ALIGNMENT 39 YS2-14j16.q1k vc_5 349 311 5025 5063 C 39 100.00 349 reject_low 5 ALIGNMENT 42 YS2-14j16.q1k vc_1 349 308 2472 2513 C 42 100.00 349 reject_low 2 ALIGNMENT 42 YS2-14j16.q1k vc_3 349 308 2472 2513 C 42 100.00 349 reject_low 3 ALIGNMENT 249 YS2-14j16.q1k chr11 308 48 59093 59353 C 261 99.23 349 accept_chi 1 ALIGNMENT 38 YS2-14j16.q1k vc_7 312 349 13525 13562 F 38 100.00 349 reject_low 6 ALIGNMENT 0 YS2-14j16.q1k vc_7 62 311 13525 13524 F 250 0.00 349 reject_low 6 ALIGNMENT 0 YS2-14j16.q1k vc_5 310 62 37 36 C 249 0.00 349 reject_low 7 ALIGNMENT 0 YS2-14j16.q1k chr11 349 309 59094 59093 C 41 0.00 349 accept_chi 1 ALIGNMENT 42 YS2-14j16.q1k vc_4 308 349 5830 5871 F 42 100.00 349 reject_low 4 ALIGNMENT 0 YS2-14j16.q1k vc_4 62 307 5830 5829 F 246 0.00 349 reject_low 4 ALIGNMENT 0 YS2-14j16.q1k vc_5 310 62 5064 5063 C 249 0.00 349 reject_low 5 ALIGNMENT 0 YS2-14j16.p1k chr11 292 308 59353 59352 F 17 0.00 308 accept_chi 0 ALIGNMENT 0 YS2-14j16.q1k vc_1 307 62 2514 2513 C 246 0.00 349 reject_low 2 ALIGNMENT 36 YS2-14j16.q1k vc_5 346 311 1 36 C 36 100.00 349 reject_low 7 ALIGNMENT 0 YS2-14j16.q1k vc_3 307 62 2514 2513 C 246 0.00 349 reject_low 3 ALIGNMENT 916 YS2-14j19.p1k chr08 33 1084 321527 322592 F 1052 96.67 1227 accept 0 ALIGNMENT 1060 YS2-14j19.q1k chr08 1204 39 323114 324287 C 1166 97.43 1342 accept 0 ALIGNMENT 951 YS2-14j20.q1k chr16 39 1144 194629 195757 F 1106 96.65 1306 accept 0 ALIGNMENT 1047 YS2-14j20.p1k chr16 1268 41 198113 199347 C 1228 95.20 1305 accept 0 ALIGNMENT 0 YS2-14j21.q1k vc_1 668 77 2513 2512 C 592 0.00 709 reject_low 2 ALIGNMENT 0 YS2-14j21.p1k chr08 657 675 208915 208914 F 19 0.00 675 accept_chi 1 ALIGNMENT 0 YS2-14j21.q1k vc_3 668 77 2513 2512 C 592 0.00 709 reject_low 3 ALIGNMENT 39 YS2-14j21.q1k vc_5 709 671 5025 5063 C 39 100.00 709 reject_low 5 ALIGNMENT 36 YS2-14j21.q1k vc_5 706 671 1 36 C 36 100.00 709 reject_low 7 ALIGNMENT 0 YS2-14j21.q1k vc_5 670 77 5064 5063 C 594 0.00 709 reject_low 5 ALIGNMENT 38 YS2-14j21.q1k vc_7 672 709 13525 13562 F 38 100.00 709 reject_low 6 ALIGNMENT 41 YS2-14j21.q1k vc_3 709 669 2472 2512 C 41 100.00 709 reject_low 3 ALIGNMENT 0 YS2-14j21.q1k vc_4 77 668 5831 5830 F 592 0.00 709 reject_low 4 ALIGNMENT 0 YS2-14j21.q1k vc_7 77 671 13525 13524 F 595 0.00 709 reject_low 6 ALIGNMENT 0 YS2-14j21.q1k chr08 709 669 208300 208299 C 41 0.00 709 accept_chi 0 ALIGNMENT 605 YS2-14j21.p1k chr08 39 656 208299 208915 F 618 99.68 675 accept_chi 1 ALIGNMENT 0 YS2-14j21.q1k vc_5 670 77 37 36 C 594 0.00 709 reject_low 7 ALIGNMENT 610 YS2-14j21.q1k chr08 668 54 208299 208913 C 615 100.00 709 accept_chi 0 ALIGNMENT 41 YS2-14j21.q1k vc_1 709 669 2472 2512 C 41 100.00 709 reject_low 2 ALIGNMENT 41 YS2-14j21.q1k vc_4 669 709 5831 5871 F 41 100.00 709 reject_low 4 ALIGNMENT 38 YS2-14j22.q1k vc_7 239 276 13525 13562 F 38 100.00 276 reject_low 6 ALIGNMENT 194 YS2-14j22.q1k chr12 34 235 930933 931134 F 202 100.00 276 accept_chi 0 ALIGNMENT 41 YS2-14j22.q1k vc_4 236 276 5831 5871 F 41 100.00 276 reject_low 4 ALIGNMENT 0 YS2-14j22.q1k vc_5 237 62 5064 5063 C 176 0.00 276 reject_low 5 ALIGNMENT 0 YS2-14j22.q1k vc_3 235 62 2513 2512 C 174 0.00 276 reject_low 3 ALIGNMENT 0 YS2-14j22.p1k chr12 256 238 930930 930929 C 19 0.00 256 accept_chi 1 ALIGNMENT 0 YS2-14j22.q1k vc_7 62 238 13525 13524 F 177 0.00 276 reject_low 6 ALIGNMENT 39 YS2-14j22.q1k vc_5 276 238 5025 5063 C 39 100.00 276 reject_low 5 ALIGNMENT 0 YS2-14j22.q1k vc_5 237 62 37 36 C 176 0.00 276 reject_low 7 ALIGNMENT 188 YS2-14j22.p1k chr12 237 34 930929 931134 C 204 99.02 256 accept_chi 1 ALIGNMENT 0 YS2-14j22.q1k chr12 236 276 931134 931133 F 41 0.00 276 accept_chi 0 ALIGNMENT 0 YS2-14j22.q1k vc_1 235 62 2513 2512 C 174 0.00 276 reject_low 2 ALIGNMENT 41 YS2-14j22.q1k vc_1 276 236 2472 2512 C 41 100.00 276 reject_low 2 ALIGNMENT 0 YS2-14j22.q1k vc_4 62 235 5831 5830 F 174 0.00 276 reject_low 4 ALIGNMENT 36 YS2-14j22.q1k vc_5 273 238 1 36 C 36 100.00 276 reject_low 7 ALIGNMENT 41 YS2-14j22.q1k vc_3 276 236 2472 2512 C 41 100.00 276 reject_low 3 ALIGNMENT 0 YS2-14j23.p1k chr05 731 868 248630 248767 F 138 0.00 1233 reject_bad_break 0 ALIGNMENT 24 YS2-14j23.p1k chr05 869 928 248768 248827 F 60 80.00 1233 reject_bad_break 0 ALIGNMENT 974 YS2-14j23.q1k chr05 1140 42 252929 254043 C 1099 97.18 1255 reject_bad_break 0 ALIGNMENT 458 YS2-14j23.p1k chr05 27 730 247940 248629 F 704 89.91 1233 reject_bad_break 0 ALIGNMENT 1052 YS2-14j24.p1k chr13 1250 32 738580 739802 C 1219 96.88 1254 accept 0 ALIGNMENT 971 YS2-14j24.q1k chr13 47 1145 736056 737167 F 1099 97.82 1273 accept 0 ALIGNMENT 1047 YS2-14k01.q1k chr12 40 1169 452265 453397 F 1130 98.05 1322 accept 0 ALIGNMENT 1016 YS2-14k01.p1k chr12 1185 33 456450 457607 C 1153 96.70 1335 reject_low 2 ALIGNMENT 301 YS2-14k01.q1k chr12 40 350 490233 490543 F 311 99.04 1322 reject_low 3 ALIGNMENT 1030 YS2-14k01.p1k chr12 1246 33 465525 466744 C 1214 95.80 1335 accept 0,1 ALIGNMENT 1047 YS2-14k01.q1k chr12 40 1169 461402 462534 F 1130 98.05 1322 accept 1 ALIGNMENT 0 YS2-14k01.q1k chr12 351 883 490543 490542 F 533 0.00 1322 reject_low 3 ALIGNMENT 903 YS2-14k02.p1k chr12 1111 35 465654 466744 C 1077 95.26 1347 accept 1 ALIGNMENT 977 YS2-14k02.q1k chr12 39 1220 452265 453457 F 1182 94.92 1356 accept 0 ALIGNMENT 276 YS2-14k02.q1k chr12 39 353 490233 490543 F 315 96.83 1356 reject_low 2 ALIGNMENT 977 YS2-14k02.q1k chr12 39 1220 461402 462594 F 1182 94.92 1356 accept 1 ALIGNMENT 0 YS2-14k02.q1k chr12 354 815 490543 490542 F 462 0.00 1356 reject_low 2 ALIGNMENT 903 YS2-14k02.p1k chr12 1111 35 456517 457607 C 1077 95.26 1347 accept 0 ALIGNMENT 61 YS2-14k03.q1k chr05 809 936 443392 443519 F 128 85.16 1337 reject_low 14 ALIGNMENT 0 YS2-14k03.q1k chr16 874 623 856899 856898 C 252 0.00 1337 reject_low 10 ALIGNMENT 0 YS2-14k03.q1k chr03 819 62 90759 90758 C 758 0.00 1337 reject_low 23 ALIGNMENT 917 YS2-14k03.q1k chr07 1182 36 773785 774942 C 1147 94.68 1337 accept 0 ALIGNMENT 0 YS2-14k03.q1k chr04 874 626 410374 410373 C 249 0.00 1337 reject_low 2 ALIGNMENT 0 YS2-14k03.q1k chr04 535 62 410465 410464 C 474 0.00 1337 reject_low 2 ALIGNMENT 64 YS2-14k03.q1k chr03 810 936 124131 124257 F 127 85.83 1337 reject_low 12 ALIGNMENT 0 YS2-14k03.q1k chr11 549 62 517703 517702 C 488 0.00 1337 reject_low 8 ALIGNMENT 62 YS2-14k03.q1k chr03 925 816 295213 295320 C 110 88.18 1337 reject_low 19 ALIGNMENT 54 YS2-14k03.q1k chr05 819 920 431495 431594 F 102 87.25 1337 reject_low 22 ALIGNMENT 60 YS2-14k03.q1k chr03 809 925 83053 83169 F 117 86.32 1337 reject_low 18 ALIGNMENT 0 YS2-14k03.q1k chr12 62 548 656935 656934 F 487 0.00 1337 reject_low 6 ALIGNMENT 72 YS2-14k03.q1k chr13 550 626 321146 321222 F 77 98.70 1337 reject_low 7 ALIGNMENT 0 YS2-14k03.q1k chr11 874 627 219538 219537 C 248 0.00 1337 reject_low 1 ALIGNMENT 0 YS2-14k03.q1k chr03 808 62 83037 83036 C 747 0.00 1337 reject_low 11 ALIGNMENT 67 YS2-14k03.q1k chr03 936 809 82909 83036 C 128 86.72 1337 reject_low 11 ALIGNMENT 0 YS2-14k03.q1k chr10 62 540 197223 197222 F 479 0.00 1337 reject_low 5 ALIGNMENT 70 YS2-14k03.q1k chr16 622 550 856898 856970 C 73 100.00 1337 reject_low 10 ALIGNMENT 0 YS2-14k03.q1k chr11 874 624 517630 517629 C 251 0.00 1337 reject_low 8 ALIGNMENT 0 YS2-14k03.q1k chr03 62 808 83053 83052 F 747 0.00 1337 reject_low 18 ALIGNMENT 76 YS2-14k03.q1k chr11 626 532 219537 219633 C 95 94.74 1337 reject_low 1 ALIGNMENT 74 YS2-14k03.q1k chr10 541 622 197223 197304 F 82 97.56 1337 reject_low 5 ALIGNMENT 0 YS2-14k03.q1k chr15 818 62 665138 665137 C 757 0.00 1337 reject_low 21 ALIGNMENT 0 YS2-14k03.q1k chr03 62 809 124131 124130 F 748 0.00 1337 reject_low 12 ALIGNMENT 71 YS2-14k03.q1k chr11 623 550 517629 517702 C 74 100.00 1337 reject_low 8 ALIGNMENT 55 YS2-14k03.q1k chr02 936 822 221245 221361 C 115 85.22 1337 reject_low 20 ALIGNMENT 0 YS2-14k03.q1k chr05 62 808 443392 443391 F 747 0.00 1337 reject_low 14 ALIGNMENT 74 YS2-14k03.q1k chr08 541 622 146226 146307 F 82 97.56 1337 reject_low 4 ALIGNMENT 0 YS2-14k03.q1k chr07 809 62 541690 541689 C 748 0.00 1337 reject_low 13 ALIGNMENT 0 YS2-14k03.q1k chr06 62 549 204912 204911 F 488 0.00 1337 reject_low 9 ALIGNMENT 46 YS2-14k03.q1k chr03 920 820 90661 90758 C 101 85.15 1337 reject_low 23 ALIGNMENT 0 YS2-14k03.q1k chr05 62 818 431495 431494 F 757 0.00 1337 reject_low 22 ALIGNMENT 955 YS2-14k03.p1k chr07 36 1224 768635 769842 F 1189 95.21 1300 accept 0 ALIGNMENT 0 YS2-14k03.q1k chr10 623 874 197304 197303 F 252 0.00 1337 reject_low 5 ALIGNMENT 43 YS2-14k03.q1k chr03 920 820 84518 84615 C 101 84.16 1337 reject_low 24 ALIGNMENT 0 YS2-14k03.q1k chr16 549 62 856971 856970 C 488 0.00 1337 reject_low 10 ALIGNMENT 80 YS2-14k03.q1k chr13 542 623 768360 768441 F 82 100.00 1337 reject_low 3 ALIGNMENT 59 YS2-14k03.q1k chr04 936 810 803105 803230 C 127 85.04 1337 reject_low 15 ALIGNMENT 58 YS2-14k03.q1k chr15 920 819 665038 665137 C 102 88.24 1337 reject_low 21 ALIGNMENT 0 YS2-14k03.q1k chr03 819 62 84616 84615 C 758 0.00 1337 reject_low 24 ALIGNMENT 0 YS2-14k03.q1k chr13 624 874 768441 768440 F 251 0.00 1337 reject_low 3 ALIGNMENT 0 YS2-14k03.q1k chr13 62 549 321146 321145 F 488 0.00 1337 reject_low 7 ALIGNMENT 62 YS2-14k03.q1k chr08 936 819 133876 133993 C 118 86.44 1337 reject_low 16 ALIGNMENT 0 YS2-14k03.q1k chr16 62 807 436245 436244 F 746 0.00 1337 reject_low 17 ALIGNMENT 0 YS2-14k03.q1k chr08 818 62 133994 133993 C 757 0.00 1337 reject_low 16 ALIGNMENT 0 YS2-14k03.q1k chr03 819 62 85132 85131 C 758 0.00 1337 reject_low 25 ALIGNMENT 0 YS2-14k03.q1k chr08 62 540 146226 146225 F 479 0.00 1337 reject_low 4 ALIGNMENT 0 YS2-14k03.q1k chr02 821 62 221362 221361 C 760 0.00 1337 reject_low 20 ALIGNMENT 0 YS2-14k03.q1k chr11 531 62 219634 219633 C 470 0.00 1337 reject_low 1 ALIGNMENT 64 YS2-14k03.q1k chr07 936 810 541563 541689 C 127 85.83 1337 reject_low 13 ALIGNMENT 70 YS2-14k03.q1k chr06 550 622 204912 204984 F 73 100.00 1337 reject_low 9 ALIGNMENT 43 YS2-14k03.q1k chr03 920 820 85034 85131 C 101 84.16 1337 reject_low 25 ALIGNMENT 76 YS2-14k03.q1k chr12 549 626 656935 657012 F 78 100.00 1337 reject_low 6 ALIGNMENT 0 YS2-14k03.q1k chr03 815 62 295321 295320 C 754 0.00 1337 reject_low 19 ALIGNMENT 0 YS2-14k03.q1k chr13 627 874 321222 321221 F 248 0.00 1337 reject_low 7 ALIGNMENT 0 YS2-14k03.q1k chr13 62 541 768360 768359 F 480 0.00 1337 reject_low 3 ALIGNMENT 0 YS2-14k03.q1k chr08 623 874 146307 146306 F 252 0.00 1337 reject_low 4 ALIGNMENT 0 YS2-14k03.q1k chr04 809 62 803231 803230 C 748 0.00 1337 reject_low 15 ALIGNMENT 0 YS2-14k03.q1k chr06 623 874 204984 204983 F 252 0.00 1337 reject_low 9 ALIGNMENT 0 YS2-14k03.q1k chr12 627 874 657012 657011 F 248 0.00 1337 reject_low 6 ALIGNMENT 59 YS2-14k03.q1k chr16 808 925 436245 436361 F 118 85.59 1337 reject_low 17 ALIGNMENT 81 YS2-14k03.q1k chr04 625 536 410373 410464 C 90 97.78 1337 reject_low 2 ALIGNMENT 0 YS2-14k04.p1k chr04 62 176 308791 308790 F 115 0.00 1331 reject_low 1 ALIGNMENT 905 YS2-14k04.q1k chr13 29 1040 545062 546082 F 1012 97.23 1303 accept 0 ALIGNMENT 1048 YS2-14k04.p1k chr13 1206 31 549760 550948 C 1176 97.36 1331 accept 0 ALIGNMENT 465 YS2-14k04.p1k chr04 177 773 308791 309387 F 597 92.80 1331 reject_low 1 ALIGNMENT 0 YS2-14k04.p1k chr04 774 902 309387 309386 F 129 0.00 1331 reject_low 1 ALIGNMENT 1014 YS2-14k05.q1k chr02 1208 48 167488 168658 C 1161 96.99 1368 accept 0 ALIGNMENT 987 YS2-14k05.p1k chr02 34 1177 163409 164562 F 1144 95.98 1285 accept 0 ALIGNMENT 97 YS2-14k07.q1k chr11 897 1122 665579 665814 F 226 84.51 1331 reject_low 25 ALIGNMENT 96 YS2-14k07.q1k chr02 897 1128 812410 812652 F 232 84.05 1331 reject_low 23 ALIGNMENT 0 YS2-14k07.p1k chr09 62 758 4888 4887 F 697 0.00 1304 reject_low 14 ALIGNMENT 0 YS2-14k07.q1k chr10 810 903 745058 745057 F 94 0.00 1331 reject_low 30 ALIGNMENT 108 YS2-14k07.q1k chr04 897 1128 1524645 1524887 F 232 85.78 1331 reject_low 10 ALIGNMENT 0 YS2-14k07.p1k chr12 532 562 3937 9470 F 31 0.00 1304 reject_low 43 ALIGNMENT 0 YS2-14k07.p1k chr14 62 782 4584 4583 F 721 0.00 1304 reject_low 13 ALIGNMENT 0 YS2-14k07.q1k chr12 896 62 12049 12048 C 835 0.00 1331 reject_low 41 ALIGNMENT 0 YS2-14k07.q1k chr04 903 810 664 663 C 94 0.00 1331 reject_low 34 ALIGNMENT 99 YS2-14k07.q1k chr04 1128 897 625 867 C 232 84.48 1331 reject_low 22 ALIGNMENT 0 YS2-14k07.q1k chr13 62 896 923575 923574 F 835 0.00 1331 reject_low 21 ALIGNMENT 0 YS2-14k07.p1k chr10 754 758 4847 4870 F 5 0.00 1304 reject_low 6 ALIGNMENT 311 YS2-14k07.p1k chr05 1242 783 571843 572307 C 460 90.00 1304 reject_low 4,7 ALIGNMENT 0 YS2-14k07.p1k chr09 783 782 4912 4972 F 0 0.00 1304 reject_low 5,14 ALIGNMENT 640 YS2-14k07.p1k chr04 753 55 1527587 1528299 C 699 97.42 1304 reject_low 10 ALIGNMENT 34 YS2-14k07.q1k chr09 757 809 439254 439306 F 53 90.57 1331 reject_low 28 ALIGNMENT 26 YS2-14k07.p1k chr04 784 759 1527537 1527562 C 26 100.00 1304|2,0 reject_low 10,16 ALIGNMENT 29 YS2-14k07.p1k chr12 449 481 3878 3910 F 33 96.97 1304 reject_low 41,42,43 ALIGNMENT 789 YS2-14k07.q1k chr16 27 980 941560 942511 F 954 96.33 1331 reject_bad_break 0 ALIGNMENT 53 YS2-14k07.p1k chr12 372 427 3832 3887 F 56 98.21 1304 reject_low 41,42,43 ALIGNMENT 0 YS2-14k07.p1k chr12 428 448 9423 9412 F 21 0.00 1304 reject_low 40 ALIGNMENT 0 YS2-14k07.p1k chr05 782 754 572308 572415 C 29 0.00 1304 reject_low 4,7 ALIGNMENT 0 YS2-14k07.q1k chr09 62 896 439102 439101 F 835 0.00 1331 reject_low 27 ALIGNMENT 22 YS2-14k07.q1k chr12 799 757 11854 11896 C 43 86.05 1331 reject_low 42 ALIGNMENT 28 YS2-14k07.q1k chr12 757 809 1064467 1064519 F 53 88.68 1331 reject_low 11 ALIGNMENT 99 YS2-14k07.q1k chr07 1104 897 531 744 C 208 86.06 1331 reject_low 24 ALIGNMENT 309 YS2-14k07.p1k chr04 1222 781 1527033 1527480 C 442 90.72 1304|0,2 reject_low 10,16 ALIGNMENT 0 YS2-14k07.p1k chr12 637 890 4009 4008 F 254 0.00 1304 reject_low 41,42 ALIGNMENT 309 YS2-14k07.p1k chr12 1222 781 1073234 1073681 C 442 90.72 1304|0,2 reject_low 11 ALIGNMENT 0 YS2-14k07.q1k chr05 800 903 569825 569824 F 104 0.00 1331 reject_low 7 ALIGNMENT 25 YS2-14k07.q1k chr13 757 809 923726 923778 F 53 84.91 1331 reject_low 37 ALIGNMENT 0 YS2-14k07.p1k chr12 482 501 3911 3906 F 20 0.00 1304 reject_low 41,42,43 ALIGNMENT 0 YS2-14k07.p1k chr12 637 890 9544 9543 F 254 0.00 1304 reject_low 43 ALIGNMENT 0 YS2-14k07.q1k chr12 810 903 1064519 1064518 F 94 0.00 1331 reject_low 11 ALIGNMENT 0 YS2-14k07.q1k chr09 903 810 7544 7543 C 94 0.00 1331 reject_low 14 ALIGNMENT 0 YS2-14k07.q1k chr10 903 810 7527 7526 C 94 0.00 1331 reject_low 15 ALIGNMENT 118 YS2-14k07.q1k chr05 897 1128 569631 569873 F 232 87.07 1331 reject_low 4 ALIGNMENT 0 YS2-14k07.p1k chr12 62 371 9367 9366 F 310 0.00 1304 reject_low 40 ALIGNMENT 0 YS2-14k07.p1k chr12 782 783 1073680 1073739 C 0 0.00 1304 reject_low 11 ALIGNMENT 0 YS2-14k07.p1k chr10 783 782 4895 4955 F 0 0.00 1304 reject_low 6,15 ALIGNMENT 26 YS2-14k07.p1k chr09 759 784 4888 4913 F 26 100.00 1304|0,2 reject_low 5,14 ALIGNMENT 0 YS2-14k07.q1k chr05 62 756 569783 569782 F 695 0.00 1331 reject_low 7 ALIGNMENT 0 YS2-14k07.q1k chr02 62 756 812562 812561 F 695 0.00 1331 reject_low 32 ALIGNMENT 25 YS2-14k07.q1k chr08 757 809 556294 556346 F 53 84.91 1331 reject_low 36 ALIGNMENT 637 YS2-14k07.p1k chr16 55 753 3672 4384 F 699 97.28 1304 reject_low 9 ALIGNMENT 24 YS2-14k07.p1k chr12 502 531 9442 9471 F 30 93.33 1304 reject_low 40 ALIGNMENT 0 YS2-14k07.q1k chr04 810 903 1524849 1524848 F 94 0.00 1331 reject_low 16 ALIGNMENT 0 YS2-14k07.q1k chr12 62 756 1064467 1064466 F 695 0.00 1331 reject_low 11 ALIGNMENT 0 YS2-14k07.p1k chr04 758 62 1527563 1527562 C 697 0.00 1304 reject_low 16 ALIGNMENT 311 YS2-14k07.p1k chr16 783 1242 4493 4957 F 460 90.00 1304 reject_low 9 ALIGNMENT 0 YS2-14k07.p1k chr09 754 758 4864 4887 F 5 0.00 1304 reject_low 5 ALIGNMENT 25 YS2-14k07.q1k chr07 809 757 540 592 C 53 84.91 1331 reject_low 35 ALIGNMENT 0 YS2-14k07.q1k chr03 62 896 315816 315815 F 835 0.00 1331 reject_low 20 ALIGNMENT 0 YS2-14k07.p1k chr12 62 371 3832 3831 F 310 0.00 1304 reject_low 41,42,43 ALIGNMENT 31 YS2-14k07.q1k chr11 757 809 665731 665783 F 53 88.68 1331 reject_low 31 ALIGNMENT 70 YS2-14k07.p1k chr12 563 636 3936 4009 F 74 98.65 1304 reject_low 41,42 ALIGNMENT 170 YS2-14k07.q1k chr08 808 1104 556053 556355 F 297 89.90 1331 reject_low 17 ALIGNMENT 0 YS2-14k07.q1k chr09 810 903 439306 439305 F 94 0.00 1331 reject_low 28 ALIGNMENT 26 YS2-14k07.q1k chr04 809 759 663 713 C 51 86.27 1331 reject_low 34 ALIGNMENT 0 YS2-14k07.p1k chr12 532 562 3937 3935 F 31 0.00 1304 reject_low 41,42 ALIGNMENT 0 YS2-14k07.p1k chr12 428 448 3888 3877 F 21 0.00 1304 reject_low 41,42,43 ALIGNMENT 0 YS2-14k07.q1k chr02 810 903 812614 812613 F 94 0.00 1331 reject_low 32 ALIGNMENT 640 YS2-14k07.p1k chr15 753 55 1086752 1087464 C 699 97.42 1304 reject_low 12 ALIGNMENT 0 YS2-14k07.q1k chr16 62 756 942552 942551 F 695 0.00 1331 reject_low 38 ALIGNMENT 0 YS2-14k07.q1k chr16 810 903 942604 942603 F 94 0.00 1331 reject_low 38 ALIGNMENT 0 YS2-14k07.q1k chr07 756 62 593 592 C 695 0.00 1331 reject_low 35 ALIGNMENT 0 YS2-14k07.q1k chr10 756 62 7579 7578 C 695 0.00 1331 reject_low 15 ALIGNMENT 114 YS2-14k07.q1k chr09 1128 897 7505 7747 C 232 86.64 1331 reject_low 5 ALIGNMENT 625 YS2-14k07.p1k chr09 55 753 4151 4863 F 699 96.71 1304 reject_low 5 ALIGNMENT 0 YS2-14k07.q1k chr03 62 756 315968 315967 F 695 0.00 1331 reject_low 29 ALIGNMENT 0 YS2-14k07.q1k chr01 903 810 561 560 C 94 0.00 1331 reject_low 39 ALIGNMENT 0 YS2-14k07.q1k chr14 62 896 783315 783314 F 835 0.00 1331 reject_low 26 ALIGNMENT 0 YS2-14k07.q1k chr10 896 62 7731 7730 C 835 0.00 1331 reject_low 6 ALIGNMENT 105 YS2-14k07.q1k chr10 897 1128 744854 745096 F 232 85.34 1331 reject_low 19 ALIGNMENT 637 YS2-14k07.p1k chr07 753 55 1086493 1087205 C 699 97.28 1304 reject_low 8 ALIGNMENT 309 YS2-14k07.p1k chr15 1222 781 1086198 1086645 C 442 90.72 1304|0,2 reject_low 12 ALIGNMENT 53 YS2-14k07.p1k chr12 372 427 9367 9422 F 56 98.21 1304 reject_low 40 ALIGNMENT 0 YS2-14k07.p1k chr10 62 758 4871 4870 F 697 0.00 1304 reject_low 15 ALIGNMENT 311 YS2-14k07.p1k chr14 783 1242 4584 5048 F 460 90.00 1304 reject_low 1,13 ALIGNMENT 0 YS2-14k07.q1k chr12 62 896 1064315 1064314 F 835 0.00 1331 reject_low 2 ALIGNMENT 31 YS2-14k07.q1k chr10 809 757 7526 7578 C 53 88.68 1331 reject_low 15 ALIGNMENT 31 YS2-14k07.q1k chr05 757 799 569783 569825 F 43 93.02 1331 reject_low 7 ALIGNMENT 0 YS2-14k07.p1k chr15 782 783 1086644 1086703 C 0 0.00 1304 reject_low 12 ALIGNMENT 0 YS2-14k07.q1k chr08 62 756 556294 556293 F 695 0.00 1331 reject_low 36 ALIGNMENT 0 YS2-14k07.q1k chr08 62 807 556053 556052 F 746 0.00 1331 reject_low 17 ALIGNMENT 48 YS2-14k07.q1k chr16 1009 1129 942511 942643 F 121 83.47 1331 reject_bad_break 0 ALIGNMENT 31 YS2-14k07.q1k chr03 757 809 315968 316020 F 53 88.68 1331 reject_low 29 ALIGNMENT 0 YS2-14k07.q1k chr09 756 62 7596 7595 C 695 0.00 1331 reject_low 14 ALIGNMENT 0 YS2-14k07.p1k chr15 758 754 1086728 1086751 C 5 0.00 1304 reject_low 12 ALIGNMENT 0 YS2-14k07.q1k chr04 758 62 714 713 C 697 0.00 1331 reject_low 34 ALIGNMENT 0 YS2-14k07.q1k chr02 62 896 812410 812409 F 835 0.00 1331 reject_low 23 ALIGNMENT 982 YS2-14k07.p1k chr12 1222 55 1066650 1067837 C 1168 95.12 1304 reject_low 2 ALIGNMENT 0 YS2-14k07.q1k chr11 62 756 665731 665730 F 695 0.00 1331 reject_low 31 ALIGNMENT 31 YS2-14k07.q1k chr14 809 757 7187 7239 C 53 88.68 1331 reject_low 13 ALIGNMENT 0 YS2-14k07.q1k chr13 810 903 923778 923777 F 94 0.00 1331 reject_low 37 ALIGNMENT 311 YS2-14k07.p1k chr07 1242 783 1085920 1086384 C 460 90.00 1304 reject_low 8 ALIGNMENT 99 YS2-14k07.q1k chr13 897 1129 923575 923817 F 233 84.55 1331 reject_low 21 ALIGNMENT 70 YS2-14k07.p1k chr12 563 636 9471 9544 F 74 98.65 1304 reject_low 43 ALIGNMENT 0 YS2-14k07.q1k chr07 896 62 745 744 C 835 0.00 1331 reject_low 24 ALIGNMENT 324 YS2-14k07.p1k chr10 781 1222 4954 5401 F 442 91.86 1304|2,0 reject_low 6,15 ALIGNMENT 0 YS2-14k07.q1k chr01 759 62 610 609 C 698 0.00 1331 reject_low 39 ALIGNMENT 0 YS2-14k07.q1k chr12 756 62 11897 11896 C 695 0.00 1331 reject_low 42 ALIGNMENT 0 YS2-14k07.q1k chr13 62 756 923726 923725 F 695 0.00 1331 reject_low 37 ALIGNMENT 28 YS2-14k07.q1k chr14 757 809 783467 783519 F 53 86.79 1331 reject_low 33 ALIGNMENT 26 YS2-14k07.p1k chr12 784 759 1073738 1073763 C 26 100.00 1304|2,0 reject_low 11 ALIGNMENT 114 YS2-14k07.q1k chr10 1128 897 7488 7730 C 232 86.64 1331 reject_low 6 ALIGNMENT 0 YS2-14k07.q1k chr03 810 903 316020 316019 F 94 0.00 1331 reject_low 29 ALIGNMENT 640 YS2-14k07.p1k chr12 753 55 1073788 1074500 C 699 97.42 1304 reject_low 11 ALIGNMENT 637 YS2-14k07.p1k chr14 55 753 3763 4475 F 699 97.28 1304 reject_low 1 ALIGNMENT 0 YS2-14k07.q1k chr14 896 62 7392 7391 C 835 0.00 1331 reject_low 1 ALIGNMENT 0 YS2-14k07.p1k chr04 758 754 1527563 1527586 C 5 0.00 1304 reject_low 10 ALIGNMENT 0 YS2-14k07.q1k chr10 62 896 744854 744853 F 835 0.00 1331 reject_low 19 ALIGNMENT 0 YS2-14k07.p1k chr12 758 754 1073764 1073787 C 5 0.00 1304 reject_low 11 ALIGNMENT 0 YS2-14k07.q1k chr11 62 896 665579 665578 F 835 0.00 1331 reject_low 25 ALIGNMENT 22 YS2-14k07.q1k chr01 809 760 560 609 C 50 84.00 1331 reject_low 39 ALIGNMENT 94 YS2-14k07.q1k chr12 1128 897 11806 12048 C 232 84.05 1331 reject_low 41 ALIGNMENT 0 YS2-14k07.q1k chr07 903 810 541 540 C 94 0.00 1331 reject_low 35 ALIGNMENT 637 YS2-14k07.p1k chr05 753 55 572416 573128 C 699 97.28 1304 reject_low 4,7 ALIGNMENT 90 YS2-14k07.q1k chr09 897 1104 439102 439315 F 208 84.62 1331 reject_low 27 ALIGNMENT 24 YS2-14k07.p1k chr12 502 531 3907 3936 F 30 93.33 1304 reject_low 41,42,43 ALIGNMENT 26 YS2-14k07.p1k chr15 784 759 1086702 1086727 C 26 100.00 1304|2,0 reject_low 12 ALIGNMENT 0 YS2-14k07.p1k chr12 482 501 9446 9441 F 20 0.00 1304 reject_low 40 ALIGNMENT 0 YS2-14k07.q1k chr11 810 903 665783 665782 F 94 0.00 1331 reject_low 31 ALIGNMENT 0 YS2-14k07.q1k chr08 810 903 556346 556345 F 94 0.00 1331 reject_low 36 ALIGNMENT 0 YS2-14k07.p1k chr16 754 782 4385 4492 F 29 0.00 1304 reject_low 9 ALIGNMENT 0 YS2-14k07.p1k chr04 782 783 1527479 1527538 C 0 0.00 1304 reject_low 10,16 ALIGNMENT 625 YS2-14k07.p1k chr10 55 753 4134 4846 F 699 96.71 1304 reject_low 6 ALIGNMENT 0 YS2-14k07.q1k chr14 756 62 7240 7239 C 695 0.00 1331 reject_low 13 ALIGNMENT 0 YS2-14k07.q1k chr09 62 756 439254 439253 F 695 0.00 1331 reject_low 28 ALIGNMENT 114 YS2-14k07.q1k chr01 1128 897 522 764 C 232 86.64 1331 reject_low 18 ALIGNMENT 97 YS2-14k07.q1k chr14 897 1122 783315 783550 F 226 84.96 1331 reject_low 26 ALIGNMENT 0 YS2-14k07.p1k chr14 754 782 4476 4583 F 29 0.00 1304 reject_low 1 ALIGNMENT 28 YS2-14k07.q1k chr02 757 809 812562 812614 F 53 86.79 1331 reject_low 32 ALIGNMENT 0 YS2-14k07.q1k chr14 62 756 783467 783466 F 695 0.00 1331 reject_low 33 ALIGNMENT 31 YS2-14k07.q1k chr10 757 809 745006 745058 F 53 88.68 1331 reject_low 30 ALIGNMENT 0 YS2-14k07.q1k chr09 896 62 7748 7747 C 835 0.00 1331 reject_low 5 ALIGNMENT 25 YS2-14k07.q1k chr16 757 809 942552 942604 F 53 84.91 1331 reject_low 38 ALIGNMENT 924 YS2-14k07.p1k chr05 55 1222 3827 5033 F 1168 93.49 1304 reject_low 3 ALIGNMENT 324 YS2-14k07.p1k chr09 781 1222 4971 5418 F 442 91.86 1304|2,0 reject_low 5,14 ALIGNMENT 0 YS2-14k07.q1k chr01 896 62 765 764 C 835 0.00 1331 reject_low 18 ALIGNMENT 106 YS2-14k07.q1k chr03 897 1122 315816 316051 F 226 85.84 1331 reject_low 20 ALIGNMENT 0 YS2-14k07.q1k chr14 810 903 783519 783518 F 94 0.00 1331 reject_low 33 ALIGNMENT 31 YS2-14k07.q1k chr09 809 757 7543 7595 C 53 88.68 1331 reject_low 14 ALIGNMENT 0 YS2-14k07.p1k chr07 782 754 1086385 1086492 C 29 0.00 1304 reject_low 8 ALIGNMENT 26 YS2-14k07.p1k chr10 759 784 4871 4896 F 26 100.00 1304|0,2 reject_low 6,15 ALIGNMENT 0 YS2-14k07.q1k chr04 896 62 868 867 C 835 0.00 1331 reject_low 22 ALIGNMENT 0 YS2-14k07.q1k chr04 62 756 1524797 1524796 F 695 0.00 1331 reject_low 16 ALIGNMENT 0 YS2-14k07.q1k chr12 903 800 11855 11854 C 104 0.00 1331 reject_low 42 ALIGNMENT 0 YS2-14k07.q1k chr16 981 1008 942512 942510 F 28 0.00 1331 reject_bad_break 0 ALIGNMENT 103 YS2-14k07.q1k chr14 1122 897 7156 7391 C 226 85.40 1331 reject_low 1 ALIGNMENT 0 YS2-14k07.q1k chr14 903 810 7188 7187 C 94 0.00 1331 reject_low 13 ALIGNMENT 0 YS2-14k07.q1k chr05 62 896 569631 569630 F 835 0.00 1331 reject_low 4 ALIGNMENT 0 YS2-14k07.q1k chr10 62 756 745006 745005 F 695 0.00 1331 reject_low 30 ALIGNMENT 0 YS2-14k07.q1k chr04 62 896 1524645 1524644 F 835 0.00 1331 reject_low 10 ALIGNMENT 0 YS2-14k07.p1k chr12 532 890 9471 9470 F 359 0.00 1304 reject_low 40 ALIGNMENT 90 YS2-14k07.q1k chr12 897 1128 1064315 1064557 F 232 83.19 1331 reject_low 2 ALIGNMENT 28 YS2-14k07.q1k chr04 757 809 1524797 1524849 F 53 86.79 1331 reject_low 16 ALIGNMENT 29 YS2-14k07.p1k chr12 449 481 9413 9445 F 33 96.97 1304 reject_low 40 ALIGNMENT 0 YS2-14k08.p1k chr12 62 370 9367 9366 F 309 0.00 1313 reject_low 22 ALIGNMENT 0 YS2-14k08.q1k chr05 795 842 569825 569824 F 48 0.00 1350 reject_low 5 ALIGNMENT 0 YS2-14k08.p1k chr15 757 753 1086728 1086751 C 5 0.00 1313 reject_low 11 ALIGNMENT 28 YS2-14k08.q1k chr14 752 804 783467 783519 F 53 86.79 1350 reject_low 17 ALIGNMENT 28 YS2-14k08.q1k chr02 752 804 812562 812614 F 53 86.79 1350 reject_low 16 ALIGNMENT 0 YS2-14k08.q1k chr10 805 842 745058 745057 F 38 0.00 1350 reject_low 15 ALIGNMENT 0 YS2-14k08.p1k chr12 757 753 1073764 1073787 C 5 0.00 1313 reject_low 10 ALIGNMENT 0 YS2-14k08.q1k chr08 62 802 556053 556052 F 741 0.00 1350 reject_low 12 ALIGNMENT 227 YS2-14k08.p1k chr16 782 1140 4493 4869 F 359 88.86 1313 reject_low 7 ALIGNMENT 0 YS2-14k08.q1k chr08 62 751 556294 556293 F 690 0.00 1350 reject_low 21 ALIGNMENT 0 YS2-14k08.q1k chr12 805 842 1064519 1064518 F 38 0.00 1350 reject_low 1 ALIGNMENT 24 YS2-14k08.p1k chr12 501 530 3907 3936 F 30 93.33 1313 reject_low 23,24 ALIGNMENT 31 YS2-14k08.q1k chr05 752 794 569783 569825 F 43 93.02 1350 reject_low 5 ALIGNMENT 0 YS2-14k08.q1k chr02 805 842 812614 812613 F 38 0.00 1350 reject_low 16 ALIGNMENT 81 YS2-14k08.q1k chr08 803 998 556053 556255 F 196 87.24 1350 reject_low 12 ALIGNMENT 227 YS2-14k08.p1k chr05 1140 782 571931 572307 C 359 88.86 1313 reject_low 5 ALIGNMENT 0 YS2-14k08.q1k chr16 62 751 942552 942551 F 690 0.00 1350 reject_low 20 ALIGNMENT 0 YS2-14k08.p1k chr05 781 753 572308 572415 C 29 0.00 1313 reject_low 5 ALIGNMENT 0 YS2-14k08.p1k chr12 427 447 9423 9412 F 21 0.00 1313 reject_low 22 ALIGNMENT 0 YS2-14k08.q1k chr14 751 62 7240 7239 C 690 0.00 1350 reject_low 2 ALIGNMENT 0 YS2-14k08.p1k chr12 531 561 3937 9470 F 31 0.00 1313 reject_low 24 ALIGNMENT 0 YS2-14k08.p1k chr12 62 370 3832 3831 F 309 0.00 1313 reject_low 23,24 ALIGNMENT 26 YS2-14k08.p1k chr04 783 758 1527537 1527562 C 26 100.00 1313|2,0 reject_low 9 ALIGNMENT 0 YS2-14k08.p1k chr10 753 757 4847 4870 F 5 0.00 1313 reject_low 4 ALIGNMENT 70 YS2-14k08.p1k chr12 562 635 9471 9544 F 74 98.65 1313 reject_low 24 ALIGNMENT 0 YS2-14k08.q1k chr03 62 751 315968 315967 F 690 0.00 1350 reject_low 14 ALIGNMENT 0 YS2-14k08.p1k chr09 753 757 4864 4887 F 5 0.00 1313 reject_low 8 ALIGNMENT 234 YS2-14k08.p1k chr04 1134 780 1527109 1527480 C 355 89.86 1313|0,2 reject_low 9 ALIGNMENT 31 YS2-14k08.q1k chr03 752 804 315968 316020 F 53 88.68 1350 reject_low 14 ALIGNMENT 22 YS2-14k08.q1k chr12 794 752 11854 11896 C 43 86.05 1350 reject_low 23 ALIGNMENT 0 YS2-14k08.p1k chr07 781 753 1086385 1086492 C 29 0.00 1313 reject_low 6 ALIGNMENT 0 YS2-14k08.p1k chr12 481 500 3911 3906 F 20 0.00 1313 reject_low 23,24 ALIGNMENT 647 YS2-14k08.p1k chr15 752 54 1086752 1087464 C 699 97.71 1313 reject_low 11 ALIGNMENT 0 YS2-14k08.q1k chr04 842 805 664 663 C 38 0.00 1350 reject_low 18 ALIGNMENT 31 YS2-14k08.q1k chr14 804 752 7187 7239 C 53 88.68 1350 reject_low 2 ALIGNMENT 632 YS2-14k08.p1k chr09 54 752 4151 4863 F 699 97.00 1313 reject_low 8 ALIGNMENT 25 YS2-14k08.q1k chr08 752 794 556294 556336 F 43 88.37 1350 reject_low 21 ALIGNMENT 24 YS2-14k08.p1k chr12 501 530 9442 9471 F 30 93.33 1313 reject_low 22 ALIGNMENT 0 YS2-14k08.q1k chr07 751 62 593 592 C 690 0.00 1350 reject_low 19 ALIGNMENT 644 YS2-14k08.p1k chr07 752 54 1086493 1087205 C 699 97.57 1313 reject_low 6 ALIGNMENT 852 YS2-14k08.p1k chr05 54 1146 3827 4971 F 1093 93.23 1313 reject_low 3 ALIGNMENT 227 YS2-14k08.p1k chr14 782 1140 4584 4960 F 359 88.86 1313 reject_low 2 ALIGNMENT 34 YS2-14k08.q1k chr09 752 804 439254 439306 F 53 90.57 1350 reject_low 13 ALIGNMENT 53 YS2-14k08.p1k chr12 371 426 9367 9422 F 56 98.21 1313 reject_low 22 ALIGNMENT 0 YS2-14k08.p1k chr12 781 782 1073680 1073739 C 0 0.00 1313 reject_low 10 ALIGNMENT 0 YS2-14k08.p1k chr12 636 884 9544 9543 F 249 0.00 1313 reject_low 24 ALIGNMENT 0 YS2-14k08.q1k chr14 805 842 783519 783518 F 38 0.00 1350 reject_low 17 ALIGNMENT 0 YS2-14k08.q1k chr02 62 751 812562 812561 F 690 0.00 1350 reject_low 16 ALIGNMENT 0 YS2-14k08.p1k chr12 427 447 3888 3877 F 21 0.00 1313 reject_low 23,24 ALIGNMENT 234 YS2-14k08.p1k chr15 1134 780 1086274 1086645 C 355 89.86 1313|0,2 reject_low 11 ALIGNMENT 227 YS2-14k08.p1k chr07 1140 782 1086008 1086384 C 359 88.86 1313 reject_low 6 ALIGNMENT 29 YS2-14k08.p1k chr12 448 480 3878 3910 F 33 96.97 1313 reject_low 23,24 ALIGNMENT 910 YS2-14k08.p1k chr12 1146 54 1066712 1067837 C 1093 94.97 1313 reject_low 1 ALIGNMENT 0 YS2-14k08.q1k chr08 795 842 556336 556335 F 48 0.00 1350 reject_low 21 ALIGNMENT 0 YS2-14k08.p1k chr12 531 884 9471 9470 F 354 0.00 1313 reject_low 22 ALIGNMENT 25 YS2-14k08.q1k chr16 752 804 942552 942604 F 53 84.91 1350 reject_low 20 ALIGNMENT 0 YS2-14k08.p1k chr10 782 781 4895 4955 F 0 0.00 1313 reject_low 4 ALIGNMENT 26 YS2-14k08.p1k chr10 758 783 4871 4896 F 26 100.00 1313|0,2 reject_low 4 ALIGNMENT 234 YS2-14k08.p1k chr12 1134 780 1073310 1073681 C 355 89.86 1313|0,2 reject_low 10 ALIGNMENT 28 YS2-14k08.q1k chr12 752 804 1064467 1064519 F 53 88.68 1350 reject_low 1 ALIGNMENT 0 YS2-14k08.q1k chr14 842 805 7188 7187 C 38 0.00 1350 reject_low 2 ALIGNMENT 647 YS2-14k08.p1k chr12 752 54 1073788 1074500 C 699 97.71 1313 reject_low 10 ALIGNMENT 26 YS2-14k08.p1k chr15 783 758 1086702 1086727 C 26 100.00 1313|2,0 reject_low 11 ALIGNMENT 0 YS2-14k08.q1k chr16 805 842 942604 942603 F 38 0.00 1350 reject_low 20 ALIGNMENT 246 YS2-14k08.p1k chr09 780 1146 4971 5356 F 367 90.19 1313|2,0 reject_low 8 ALIGNMENT 0 YS2-14k08.q1k chr09 805 842 439306 439305 F 38 0.00 1350 reject_low 13 ALIGNMENT 632 YS2-14k08.p1k chr10 54 752 4134 4846 F 699 97.00 1313 reject_low 4 ALIGNMENT 246 YS2-14k08.p1k chr10 780 1146 4954 5339 F 367 90.19 1313|2,0 reject_low 4 ALIGNMENT 0 YS2-14k08.q1k chr10 62 751 745006 745005 F 690 0.00 1350 reject_low 15 ALIGNMENT 644 YS2-14k08.p1k chr16 54 752 3672 4384 F 699 97.57 1313 reject_low 7 ALIGNMENT 0 YS2-14k08.q1k chr12 842 795 11855 11854 C 48 0.00 1350 reject_low 23 ALIGNMENT 26 YS2-14k08.p1k chr12 783 758 1073738 1073763 C 26 100.00 1313|2,0 reject_low 10 ALIGNMENT 0 YS2-14k08.p1k chr15 781 782 1086644 1086703 C 0 0.00 1313 reject_low 11 ALIGNMENT 0 YS2-14k08.p1k chr12 636 884 4009 4008 F 249 0.00 1313 reject_low 23 ALIGNMENT 0 YS2-14k08.p1k chr09 782 781 4912 4972 F 0 0.00 1313 reject_low 8 ALIGNMENT 31 YS2-14k08.q1k chr10 804 752 7526 7578 C 53 88.68 1350 reject_low 4 ALIGNMENT 0 YS2-14k08.q1k chr07 842 805 541 540 C 38 0.00 1350 reject_low 19 ALIGNMENT 26 YS2-14k08.p1k chr09 758 783 4888 4913 F 26 100.00 1313|0,2 reject_low 8 ALIGNMENT 25 YS2-14k08.q1k chr07 804 752 540 592 C 53 84.91 1350 reject_low 19 ALIGNMENT 644 YS2-14k08.p1k chr14 54 752 3763 4475 F 699 97.57 1313 reject_low 2 ALIGNMENT 0 YS2-14k08.q1k chr10 751 62 7579 7578 C 690 0.00 1350 reject_low 4 ALIGNMENT 0 YS2-14k08.q1k chr04 753 62 714 713 C 692 0.00 1350 reject_low 18 ALIGNMENT 26 YS2-14k08.q1k chr04 804 754 663 713 C 51 86.27 1350 reject_low 18 ALIGNMENT 0 YS2-14k08.p1k chr12 531 561 3937 3935 F 31 0.00 1313 reject_low 23 ALIGNMENT 53 YS2-14k08.p1k chr12 371 426 3832 3887 F 56 98.21 1313 reject_low 23,24 ALIGNMENT 0 YS2-14k08.p1k chr16 753 781 4385 4492 F 29 0.00 1313 reject_low 7 ALIGNMENT 0 YS2-14k08.p1k chr14 753 781 4476 4583 F 29 0.00 1313 reject_low 2 ALIGNMENT 0 YS2-14k08.q1k chr12 62 751 1064467 1064466 F 690 0.00 1350 reject_low 1 ALIGNMENT 0 YS2-14k08.p1k chr04 757 753 1527563 1527586 C 5 0.00 1313 reject_low 9 ALIGNMENT 0 YS2-14k08.q1k chr05 62 751 569783 569782 F 690 0.00 1350 reject_low 5 ALIGNMENT 768 YS2-14k08.q1k chr16 23 970 941560 942511 F 948 95.89 1350 accept 0 ALIGNMENT 31 YS2-14k08.q1k chr10 752 804 745006 745058 F 53 88.68 1350 reject_low 15 ALIGNMENT 0 YS2-14k08.q1k chr12 751 62 11897 11896 C 690 0.00 1350 reject_low 23 ALIGNMENT 0 YS2-14k08.q1k chr09 62 751 439254 439253 F 690 0.00 1350 reject_low 13 ALIGNMENT 0 YS2-14k08.p1k chr12 481 500 9446 9441 F 20 0.00 1313 reject_low 22 ALIGNMENT 0 YS2-14k08.q1k chr10 842 805 7527 7526 C 38 0.00 1350 reject_low 4 ALIGNMENT 70 YS2-14k08.p1k chr12 562 635 3936 4009 F 74 98.65 1313 reject_low 23 ALIGNMENT 0 YS2-14k08.p1k chr04 781 782 1527479 1527538 C 0 0.00 1313 reject_low 9 ALIGNMENT 0 YS2-14k08.q1k chr14 62 751 783467 783466 F 690 0.00 1350 reject_low 17 ALIGNMENT 0 YS2-14k08.q1k chr03 805 842 316020 316019 F 38 0.00 1350 reject_low 14 ALIGNMENT 647 YS2-14k08.p1k chr04 752 54 1527587 1528299 C 699 97.71 1313 reject_low 9 ALIGNMENT 644 YS2-14k08.p1k chr05 752 54 572416 573128 C 699 97.57 1313 reject_low 5 ALIGNMENT 29 YS2-14k08.p1k chr12 448 480 9413 9445 F 33 96.97 1313 reject_low 22 ALIGNMENT 0 YS2-14k10.q1k chr04 805 491 1159824 1159823 C 315 0.00 1350 manual 3 ALIGNMENT 0 YS2-14k10.q1k chr08 805 491 291140 291139 C 315 0.00 1350 manual 2 ALIGNMENT 36 YS2-14k10.q1k chr04 490 221 1159823 1160091 C 270 71.85 1350 manual 3 ALIGNMENT 213 YS2-14k10.p1k chr04 46 991 8795 9742 F 946 74.31 1259 ambiguous_tel 1 ALIGNMENT 216 YS2-14k10.p1k chr10 991 46 735973 736920 C 946 74.42 1259 ambiguous_tel 0 ALIGNMENT 34 YS2-14k10.q1k chr08 490 150 291139 291478 C 341 70.97 1350 manual 2 ALIGNMENT 0 YS2-14k10.q1k chr08 149 62 291479 291478 C 88 0.00 1350 manual 2 ALIGNMENT 0 YS2-14k10.q1k chr04 220 62 1160092 1160091 C 159 0.00 1350 manual 3 ALIGNMENT 900 YS2-14k11.q1k chr02 1044 40 398537 399559 C 1005 97.61 1288 accept 0 ALIGNMENT 1000 YS2-14k11.p1k chr02 30 1212 394791 395981 F 1183 96.37 1223 accept 0 ALIGNMENT 289 YS2-14k12.q1k chr10 31 334 378284 378587 F 304 98.68 375 accept_chi 0 ALIGNMENT 0 YS2-14k12.p1k chr07 336 354 412362 412361 F 19 0.00 354 reject_low 8 ALIGNMENT 0 YS2-14k12.p1k chr07 354 336 823496 823495 C 19 0.00 354 reject_low 21 ALIGNMENT 73 YS2-14k12.q1k chr08 103 31 85287 85359 C 73 100.00 375 reject_low 14 ALIGNMENT 0 YS2-14k12.p1k chr13 62 264 420582 420581 F 203 0.00 354 reject_low 28 ALIGNMENT 70 YS2-14k12.p1k chr13 263 335 372437 372509 F 73 98.63 354 reject_low 18 ALIGNMENT 0 YS2-14k12.p1k chr11 62 262 307782 307781 F 201 0.00 354 reject_low 13 ALIGNMENT 69 YS2-14k12.q1k chr07 31 102 823495 823566 F 72 98.61 375 reject_low 24 ALIGNMENT 0 YS2-14k12.p1k chr07 336 354 73893 73892 F 19 0.00 354 reject_low 30 ALIGNMENT 0 YS2-14k12.q1k vc_7 62 337 13525 13524 F 276 0.00 375 reject_low 6 ALIGNMENT 0 YS2-14k12.p1k chr07 62 255 412283 412282 F 194 0.00 354 reject_low 8 ALIGNMENT 0 YS2-14k12.p1k chr08 336 354 85359 85358 F 19 0.00 354 reject_low 12 ALIGNMENT 0 YS2-14k12.q1k vc_5 336 62 37 36 C 275 0.00 375 reject_low 7 ALIGNMENT 0 YS2-14k12.p1k chr05 354 336 469461 469460 C 19 0.00 354 reject_low 20 ALIGNMENT 73 YS2-14k12.p1k chr11 263 335 307782 307854 F 73 100.00 354 reject_low 13 ALIGNMENT 0 YS2-14k12.q1k chr11 375 104 307783 307782 C 272 0.00 375 reject_low 15 ALIGNMENT 38 YS2-14k12.q1k vc_7 338 375 13525 13562 F 38 100.00 375 reject_low 6 ALIGNMENT 0 YS2-14k12.q1k chr10 335 375 378587 378586 F 41 0.00 375 accept_chi 0 ALIGNMENT 41 YS2-14k12.q1k vc_3 375 335 2472 2512 C 41 100.00 375 reject_low 3 ALIGNMENT 0 YS2-14k12.p1k chr11 354 336 379332 379331 C 19 0.00 354 reject_low 26 ALIGNMENT 0 YS2-14k12.q1k vc_1 334 62 2513 2512 C 273 0.00 375 reject_low 2 ALIGNMENT 0 YS2-14k12.p1k chr08 62 262 85287 85286 F 201 0.00 354 reject_low 12 ALIGNMENT 284 YS2-14k12.p1k chr10 335 37 378284 378582 C 299 98.66 354 accept_chi 1 ALIGNMENT 0 YS2-14k12.q1k chr15 375 96 663814 663813 C 280 0.00 375 reject_low 33 ALIGNMENT 71 YS2-14k12.p1k chr13 262 335 586627 586700 F 74 98.65 354 reject_low 16 ALIGNMENT 0 YS2-14k12.p1k chr13 336 354 420652 420651 F 19 0.00 354 reject_low 28 ALIGNMENT 0 YS2-14k12.p1k chr05 354 336 438705 438704 C 19 0.00 354 reject_low 10 ALIGNMENT 0 YS2-14k12.p1k chr10 354 336 378285 378284 C 19 0.00 354 accept_chi 1 ALIGNMENT 0 YS2-14k12.p1k chr15 62 270 663813 663812 F 209 0.00 354 reject_low 32 ALIGNMENT 0 YS2-14k12.q1k chr07 103 375 823566 823565 F 273 0.00 375 reject_low 24 ALIGNMENT 69 YS2-14k12.q1k chr05 31 102 469460 469531 F 72 98.61 375 reject_low 23 ALIGNMENT 0 YS2-14k12.p1k chr13 336 354 586700 586699 F 19 0.00 354 reject_low 16 ALIGNMENT 68 YS2-14k12.q1k chr13 101 31 420582 420652 C 71 98.59 375 reject_low 29 ALIGNMENT 0 YS2-14k12.p1k chr11 336 354 307854 307853 F 19 0.00 354 reject_low 13 ALIGNMENT 70 YS2-14k12.q1k chr13 103 31 372437 372509 C 73 98.63 375 reject_low 19 ALIGNMENT 39 YS2-14k12.q1k vc_5 375 337 5025 5063 C 39 100.00 375 reject_low 5 ALIGNMENT 0 YS2-14k12.p1k chr12 336 354 687926 687925 F 19 0.00 354 reject_low 22 ALIGNMENT 0 YS2-14k12.q1k vc_3 334 62 2513 2512 C 273 0.00 375 reject_low 3 ALIGNMENT 73 YS2-14k12.q1k chr11 103 31 307782 307854 C 73 100.00 375 reject_low 15 ALIGNMENT 0 YS2-14k12.q1k chr07 375 111 412284 412283 C 265 0.00 375 reject_low 9 ALIGNMENT 0 YS2-14k12.q1k chr07 375 104 73822 73821 C 272 0.00 375 reject_low 31 ALIGNMENT 71 YS2-14k12.q1k chr13 104 31 586627 586700 C 74 98.65 375 reject_low 17 ALIGNMENT 0 YS2-14k12.p1k chr15 336 354 663877 663876 F 19 0.00 354 reject_low 32 ALIGNMENT 0 YS2-14k12.p1k chr05 263 62 469532 469531 C 202 0.00 354 reject_low 20 ALIGNMENT 0 YS2-14k12.q1k vc_5 336 62 5064 5063 C 275 0.00 375 reject_low 5 ALIGNMENT 36 YS2-14k12.q1k vc_5 372 337 1 36 C 36 100.00 375 reject_low 7 ALIGNMENT 65 YS2-14k12.p1k chr15 271 335 663813 663877 F 65 100.00 354 reject_low 32 ALIGNMENT 70 YS2-14k12.q1k chr07 110 31 412283 412362 C 80 96.25 375 reject_low 9 ALIGNMENT 67 YS2-14k12.q1k chr07 103 31 73821 73893 C 73 97.26 375 reject_low 31 ALIGNMENT 0 YS2-14k12.p1k chr11 266 62 379400 379399 C 205 0.00 354 reject_low 26 ALIGNMENT 69 YS2-14k12.p1k chr07 335 264 823495 823566 C 72 98.61 354 reject_low 21 ALIGNMENT 70 YS2-14k12.p1k chr07 256 335 412283 412362 F 80 96.25 354 reject_low 8 ALIGNMENT 0 YS2-14k12.p1k chr12 62 263 687855 687854 F 202 0.00 354 reject_low 22 ALIGNMENT 65 YS2-14k12.q1k chr15 95 31 663813 663877 C 65 100.00 375 reject_low 33 ALIGNMENT 0 YS2-14k12.q1k chr08 375 104 85288 85287 C 272 0.00 375 reject_low 14 ALIGNMENT 0 YS2-14k12.q1k chr05 108 375 438780 438779 F 268 0.00 375 reject_low 11 ALIGNMENT 0 YS2-14k12.q1k chr05 103 375 469531 469530 F 273 0.00 375 reject_low 23 ALIGNMENT 0 YS2-14k12.q1k chr13 375 104 372438 372437 C 272 0.00 375 reject_low 19 ALIGNMENT 0 YS2-14k12.q1k vc_4 62 334 5831 5830 F 273 0.00 375 reject_low 4 ALIGNMENT 0 YS2-14k12.p1k chr05 258 62 438781 438780 C 197 0.00 354 reject_low 10 ALIGNMENT 0 YS2-14k12.p1k chr13 336 354 372509 372508 F 19 0.00 354 reject_low 18 ALIGNMENT 0 YS2-14k12.q1k chr12 375 103 687856 687855 C 273 0.00 375 reject_low 25 ALIGNMENT 0 YS2-14k12.p1k chr13 62 262 372437 372436 F 201 0.00 354 reject_low 18 ALIGNMENT 69 YS2-14k12.q1k chr12 102 31 687855 687926 C 72 98.61 375 reject_low 25 ALIGNMENT 0 YS2-14k12.p1k chr07 62 262 73821 73820 F 201 0.00 354 reject_low 30 ALIGNMENT 74 YS2-14k12.q1k chr05 31 107 438704 438780 F 77 98.70 375 reject_low 11 ALIGNMENT 0 YS2-14k12.p1k chr07 263 62 823567 823566 C 202 0.00 354 reject_low 21 ALIGNMENT 0 YS2-14k12.q1k chr13 375 105 586628 586627 C 271 0.00 375 reject_low 17 ALIGNMENT 0 YS2-14k12.q1k chr11 100 375 379399 379398 F 276 0.00 375 reject_low 27 ALIGNMENT 69 YS2-14k12.p1k chr12 264 335 687855 687926 F 72 98.61 354 reject_low 22 ALIGNMENT 41 YS2-14k12.q1k vc_1 375 335 2472 2512 C 41 100.00 375 reject_low 2 ALIGNMENT 74 YS2-14k12.p1k chr05 335 259 438704 438780 C 77 98.70 354 reject_low 10 ALIGNMENT 0 YS2-14k12.p1k chr13 62 261 586627 586626 F 200 0.00 354 reject_low 16 ALIGNMENT 69 YS2-14k12.q1k chr11 31 99 379331 379399 F 69 100.00 375 reject_low 27 ALIGNMENT 41 YS2-14k12.q1k vc_4 335 375 5831 5871 F 41 100.00 375 reject_low 4 ALIGNMENT 68 YS2-14k12.p1k chr13 265 335 420582 420652 F 71 98.59 354 reject_low 28 ALIGNMENT 69 YS2-14k12.p1k chr05 335 264 469460 469531 C 72 98.61 354 reject_low 20 ALIGNMENT 73 YS2-14k12.p1k chr08 263 335 85287 85359 F 73 100.00 354 reject_low 12 ALIGNMENT 0 YS2-14k12.q1k chr13 375 102 420583 420582 C 274 0.00 375 reject_low 29 ALIGNMENT 69 YS2-14k12.p1k chr11 335 267 379331 379399 C 69 100.00 354 reject_low 26 ALIGNMENT 67 YS2-14k12.p1k chr07 263 335 73821 73893 F 73 97.26 354 reject_low 30 ALIGNMENT 0 YS2-14k14.q1k vc_3 790 62 2513 2512 C 729 0.00 831 reject_low 13 ALIGNMENT 38 YS2-14k14.q1k vc_7 794 831 13525 13562 F 38 100.00 831 reject_low 16 ALIGNMENT 0 YS2-14k14.p1k vc_4 62 795 5871 5870 F 734 0.00 1394 reject_low 5 ALIGNMENT 0 YS2-14k14.q1k vc_7 62 793 13525 13524 F 732 0.00 831 reject_low 16 ALIGNMENT 0 YS2-14k14.p1k chr04 808 780 282919 282918 C 29 0.00 1394 accept_chi 1 ALIGNMENT 0 YS2-14k14.p1k vc_3 795 62 2106 2105 C 734 0.00 1394 reject_low 4 ALIGNMENT 41 YS2-14k14.q1k vc_4 791 831 5831 5871 F 41 100.00 831 reject_low 14 ALIGNMENT 0 YS2-14k14.q1k vc_1 790 62 2513 2512 C 729 0.00 831 reject_low 11 ALIGNMENT 216 YS2-14k14.p1k vc_5 1135 796 4673 5025 C 340 90.00 1394 reject_low 6 ALIGNMENT 0 YS2-14k14.p1k vc_3 795 62 2473 2472 C 734 0.00 1394 reject_low 10 ALIGNMENT 216 YS2-14k14.p1k vc_7 796 1135 100 452 F 340 90.00 1394 reject_low 7 ALIGNMENT 216 YS2-14k14.p1k vc_4 796 1135 5871 6223 F 340 90.00 1394 reject_low 5 ALIGNMENT 216 YS2-14k14.p1k vc_1 1135 796 1753 2105 C 340 90.00 1394 reject_low 2 ALIGNMENT 0 YS2-14k14.q1k vc_4 62 790 5831 5830 F 729 0.00 831 reject_low 14 ALIGNMENT 0 YS2-14k14.q1k chr04 792 831 283668 283667 F 40 0.00 831 accept_chi 0 ALIGNMENT 39 YS2-14k14.q1k vc_5 831 793 5025 5063 C 39 100.00 831 reject_low 15 ALIGNMENT 0 YS2-14k14.p1k vc_7 62 795 13562 13561 F 734 0.00 1394 reject_low 8 ALIGNMENT 26 YS2-14k14.p1k vc_1 826 796 2441 2472 C 31 96.77 1394 reject_low 9 ALIGNMENT 703 YS2-14k14.p1k chr04 779 31 282918 283665 C 749 99.07 1394 accept_chi 1 ALIGNMENT 0 YS2-14k14.q1k vc_2 790 62 2146 2145 C 729 0.00 831 reject_low 12 ALIGNMENT 0 YS2-14k14.p1k vc_2 795 62 2106 2105 C 734 0.00 1394 reject_low 3 ALIGNMENT 714 YS2-14k14.q1k chr04 39 791 282918 283668 F 753 99.34 831 accept_chi 0 ALIGNMENT 0 YS2-14k14.p1k vc_5 795 62 5026 5025 C 734 0.00 1394 reject_low 6 ALIGNMENT 0 YS2-14k14.p1k vc_1 795 62 2106 2105 C 734 0.00 1394 reject_low 2 ALIGNMENT 41 YS2-14k14.q1k vc_3 831 791 2472 2512 C 41 100.00 831 reject_low 13 ALIGNMENT 0 YS2-14k14.q1k vc_5 792 62 37 36 C 731 0.00 831 reject_low 17 ALIGNMENT 216 YS2-14k14.p1k vc_7 796 1135 13562 13914 F 340 90.00 1394 reject_low 8 ALIGNMENT 41 YS2-14k14.q1k vc_2 831 791 2105 2145 C 41 100.00 831 reject_low 12 ALIGNMENT 36 YS2-14k14.q1k vc_5 828 793 1 36 C 36 100.00 831 reject_low 17 ALIGNMENT 216 YS2-14k14.p1k vc_3 1135 796 1753 2105 C 340 90.00 1394 reject_low 4 ALIGNMENT 41 YS2-14k14.q1k vc_1 831 791 2472 2512 C 41 100.00 831 reject_low 11 ALIGNMENT 0 YS2-14k14.p1k vc_1 795 62 2473 2472 C 734 0.00 1394 reject_low 9 ALIGNMENT 26 YS2-14k14.p1k vc_3 826 796 2441 2472 C 31 96.77 1394 reject_low 10 ALIGNMENT 0 YS2-14k14.p1k vc_7 62 795 100 99 F 734 0.00 1394 reject_low 7 ALIGNMENT 0 YS2-14k14.q1k vc_5 792 62 5064 5063 C 731 0.00 831 reject_low 15 ALIGNMENT 216 YS2-14k14.p1k vc_2 1135 796 1753 2105 C 340 90.00 1394 reject_low 3 ALIGNMENT 1006 YS2-14k15.q1k chr13 1180 39 527392 528542 C 1142 97.29 1328 accept 0 ALIGNMENT 1067 YS2-14k15.p1k chr13 30 1207 524519 525695 F 1178 97.45 1334 accept 0 ALIGNMENT 965 YS2-14k16.q1k chr13 1162 41 527412 528542 C 1122 96.70 1366 accept 0 ALIGNMENT 1054 YS2-14k16.p1k chr13 18 1248 524507 525747 F 1231 96.34 1409 accept 0 ALIGNMENT 0 YS2-14k17.q1k chr04 902 500 644184 644183 C 403 0.00 1298 reject_low 1 ALIGNMENT 0 YS2-14k17.q1k chr04 172 62 644510 644509 C 111 0.00 1298 reject_low 1 ALIGNMENT 965 YS2-14k17.q1k chr05 1154 31 537765 538906 C 1124 96.53 1298 accept 0 ALIGNMENT 984 YS2-14k17.p1k chr05 39 1130 533894 534992 F 1092 97.53 1270 accept 0 ALIGNMENT 109 YS2-14k17.q1k chr04 499 173 644183 644509 C 327 78.59 1298 reject_low 1 ALIGNMENT 1089 YS2-14k18.p1k chr05 34 1321 533889 535192 F 1288 96.04 1340 accept 0 ALIGNMENT 971 YS2-14k18.q1k chr05 1086 40 537851 538906 C 1047 98.47 1311 accept 0 ALIGNMENT 0 YS2-14k18.q1k chr04 897 510 644184 644183 C 388 0.00 1311 reject_low 1 ALIGNMENT 0 YS2-14k18.q1k chr04 182 62 644510 644509 C 121 0.00 1311 reject_low 1 ALIGNMENT 109 YS2-14k18.q1k chr04 509 183 644183 644509 C 327 78.59 1311 reject_low 1 ALIGNMENT 949 YS2-14k22.p1k chr12 28 1075 791593 792651 F 1048 97.81 1303 accept 0 ALIGNMENT 915 YS2-14k22.q1k chr12 1090 31 791920 793001 C 1060 97.08 1257 accept 0 ALIGNMENT 0 YS2-14k24.q1k vc_4 62 355 5831 5830 F 294 0.00 396 reject_low 4 ALIGNMENT 0 YS2-14k24.q1k vc_7 62 358 13525 13524 F 297 0.00 396 reject_low 6 ALIGNMENT 0 YS2-14k24.p1k chr14 370 352 59183 59182 C 19 0.00 370 accept_chi 0 ALIGNMENT 0 YS2-14k24.q1k vc_5 357 62 37 36 C 296 0.00 396 reject_low 7 ALIGNMENT 39 YS2-14k24.q1k vc_5 396 358 5025 5063 C 39 100.00 396 reject_low 5 ALIGNMENT 38 YS2-14k24.q1k vc_7 359 396 13525 13562 F 38 100.00 396 reject_low 6 ALIGNMENT 0 YS2-14k24.q1k vc_3 355 62 2513 2512 C 294 0.00 396 reject_low 3 ALIGNMENT 36 YS2-14k24.q1k vc_5 393 358 1 36 C 36 100.00 396 reject_low 7 ALIGNMENT 311 YS2-14k24.q1k chr14 40 355 59182 59498 F 316 99.68 396 accept_chi 1 ALIGNMENT 41 YS2-14k24.q1k vc_4 356 396 5831 5871 F 41 100.00 396 reject_low 4 ALIGNMENT 0 YS2-14k24.q1k chr14 356 396 59498 59497 F 41 0.00 396 accept_chi 1 ALIGNMENT 0 YS2-14k24.q1k vc_5 357 62 5064 5063 C 296 0.00 396 reject_low 5 ALIGNMENT 0 YS2-14k24.q1k vc_1 355 62 2513 2512 C 294 0.00 396 reject_low 2 ALIGNMENT 41 YS2-14k24.q1k vc_3 396 356 2472 2512 C 41 100.00 396 reject_low 3 ALIGNMENT 316 YS2-14k24.p1k chr14 351 35 59182 59498 C 317 100.00 370 accept_chi 0 ALIGNMENT 41 YS2-14k24.q1k vc_1 396 356 2472 2512 C 41 100.00 396 reject_low 2 ALIGNMENT 997 YS2-14l01.q1k chr09 38 1175 270014 271162 F 1138 96.40 1347 accept 0 ALIGNMENT 861 YS2-14l01.p1k chr09 1038 33 270658 271665 C 1006 96.22 1394 accept 0 ALIGNMENT 954 YS2-14l02.p1k chr07 30 1239 502148 503369 F 1210 94.55 1386 accept 0 ALIGNMENT 1069 YS2-14l02.q1k chr07 1278 34 506142 507397 C 1245 95.98 1347 accept 0 ALIGNMENT 38 YS2-14l03.q1k vc_7 464 501 13525 13562 F 38 100.00 501 reject_low 12 ALIGNMENT 40 YS2-14l03.q1k vc_3 501 462 2472 2511 C 40 100.00 501 reject_low 9 ALIGNMENT 230 YS2-14l03.p1k vc_2 413 1 1328 1749 C 413 86.68 504 reject_vc 2 ALIGNMENT 0 YS2-14l03.q1k vc_7 62 463 13525 13524 F 402 0.00 501 reject_low 12 ALIGNMENT 230 YS2-14l03.p1k vc_3 413 1 1328 1749 C 413 86.68 504 reject_vc 3 ALIGNMENT 0 YS2-14l03.q1k vc_5 462 62 5064 5063 C 401 0.00 501 reject_low 11 ALIGNMENT 230 YS2-14l03.p1k vc_1 413 1 1328 1749 C 413 86.68 504 reject_vc 1 ALIGNMENT 0 YS2-14l03.q1k chr08 466 501 504057 504056 F 36 0.00 501 accept 0 ALIGNMENT 230 YS2-14l03.p1k vc_7 1 413 456 877 F 413 86.92 504 reject_vc 5 ALIGNMENT 36 YS2-14l03.q1k vc_5 498 463 1 36 C 36 100.00 501 reject_low 13 ALIGNMENT 420 YS2-14l03.q1k chr08 32 465 503623 504057 F 434 99.31 501 accept 0 ALIGNMENT 40 YS2-14l03.q1k vc_4 462 501 5832 5871 F 40 100.00 501 reject_low 10 ALIGNMENT 0 YS2-14l03.q1k vc_5 462 62 37 36 C 401 0.00 501 reject_low 13 ALIGNMENT 229 YS2-14l03.p1k vc_6 1 376 3712 4093 F 376 88.30 504 reject_vc 7 ALIGNMENT 0 YS2-14l03.q1k vc_3 461 62 2512 2511 C 400 0.00 501 reject_low 9 ALIGNMENT 0 YS2-14l03.q1k vc_4 62 461 5832 5831 F 400 0.00 501 reject_low 10 ALIGNMENT 230 YS2-14l03.p1k vc_5 413 1 4248 4669 C 413 86.68 504 reject_vc 4 ALIGNMENT 230 YS2-14l03.p1k vc_7 1 413 13918 14339 F 413 86.92 504 reject_vc 6 ALIGNMENT 40 YS2-14l03.q1k vc_1 501 462 2472 2511 C 40 100.00 501 reject_low 8 ALIGNMENT 0 YS2-14l03.q1k vc_1 461 62 2512 2511 C 400 0.00 501 reject_low 8 ALIGNMENT 39 YS2-14l03.q1k vc_5 501 463 5025 5063 C 39 100.00 501 reject_low 11 ALIGNMENT 0 YS2-14l04.q1k vc_4 62 477 5828 5827 F 416 0.00 521 reject_low 7 ALIGNMENT 342 YS2-14l04.p1k chr12 475 31 460539 460996 C 445 94.61 492 accept 0 ALIGNMENT 43 YS2-14l04.q1k vc_1 521 478 2472 2515 C 44 100.00 521 reject_low 5 ALIGNMENT 38 YS2-14l04.q1k vc_7 484 521 13525 13562 F 38 100.00 521 reject_low 8 ALIGNMENT 347 YS2-14l04.q1k chr12 36 481 460539 460996 F 446 94.84 521 reject_low 1 ALIGNMENT 70 YS2-14l04.q1k chr12 408 481 489754 489827 F 74 100.00 521 reject_low 3 ALIGNMENT 0 YS2-14l04.p1k chr12 492 476 460540 460539 C 17 0.00 492 accept 0 ALIGNMENT 0 YS2-14l04.p1k chr12 492 459 451420 451419 C 34 0.00 492 reject_low 2 ALIGNMENT 0 YS2-14l04.q1k vc_2 477 62 2149 2148 C 416 0.00 521 reject_low 6 ALIGNMENT 43 YS2-14l04.q1k vc_2 521 478 2105 2148 C 44 100.00 521 reject_low 6 ALIGNMENT 0 YS2-14l04.q1k chr12 62 407 489754 489753 F 346 0.00 521 reject_low 3 ALIGNMENT 330 YS2-14l04.p1k chr12 458 31 451419 451859 C 428 94.63 492 reject_low 2 ALIGNMENT 0 YS2-14l04.q1k vc_7 62 483 13525 13524 F 422 0.00 521 reject_low 8 ALIGNMENT 43 YS2-14l04.q1k vc_4 478 521 5828 5871 F 44 100.00 521 reject_low 7 ALIGNMENT 0 YS2-14l04.p1k chr12 492 104 489755 489754 C 389 0.00 492 reject_low 4 ALIGNMENT 65 YS2-14l04.p1k chr12 103 31 489754 489827 C 73 98.63 492 reject_low 4 ALIGNMENT 335 YS2-14l04.q1k chr12 53 481 451419 451859 F 429 94.87 521 accept 0 ALIGNMENT 0 YS2-14l04.q1k vc_1 477 62 2516 2515 C 416 0.00 521 reject_low 5 ALIGNMENT 0 YS2-14l04.q1k chr12 482 521 451859 451858 F 40 0.00 521 accept 0 ALIGNMENT 0 YS2-14l04.q1k chr12 482 521 460996 460995 F 40 0.00 521 reject_low 1 ALIGNMENT 0 YS2-14l04.q1k chr12 482 521 489827 489826 F 40 0.00 521 reject_low 3 ALIGNMENT 983 YS2-14l05.q1k chr08 39 1098 340222 341287 F 1060 97.83 1317 accept 0 ALIGNMENT 970 YS2-14l05.p1k chr08 1126 33 343676 344778 C 1094 96.98 1290 accept 0 ALIGNMENT 986 YS2-14l06.p1k chr13 1177 31 499137 500293 C 1147 95.38 1308 accept 0 ALIGNMENT 964 YS2-14l06.q1k chr13 39 1109 494954 496037 F 1071 97.57 1340 accept 0 ALIGNMENT 982 YS2-14l07.q1k chr10 35 1153 132674 133802 F 1119 96.43 1377 accept 0 ALIGNMENT 1008 YS2-14l07.p1k chr10 1228 30 135179 136365 C 1199 94.75 1324 accept 0 ALIGNMENT 1124 YS2-14l08.p1k chr15 1286 30 776767 778034 C 1257 97.06 1322 accept 0 ALIGNMENT 965 YS2-14l08.q1k chr15 32 1162 773961 775108 F 1131 96.02 1388 accept 0 ALIGNMENT 36 YS2-14l09.q1k chr04 490 221 1159823 1160091 C 270 71.85 1355 manual 3 ALIGNMENT 0 YS2-14l09.q1k chr08 149 62 291479 291478 C 88 0.00 1355 manual 2 ALIGNMENT 0 YS2-14l09.q1k chr04 806 491 1159824 1159823 C 316 0.00 1355 manual 3 ALIGNMENT 0 YS2-14l09.q1k chr04 220 62 1160092 1160091 C 159 0.00 1355 manual 3 ALIGNMENT 201 YS2-14l09.p1k chr10 1007 49 735960 736919 C 959 74.04 1244 ambiguous_tel 0 ALIGNMENT 198 YS2-14l09.p1k chr04 49 1007 8796 9755 F 959 73.83 1244 ambiguous_tel 1 ALIGNMENT 0 YS2-14l09.q1k chr08 806 491 291140 291139 C 316 0.00 1355 manual 2 ALIGNMENT 34 YS2-14l09.q1k chr08 490 150 291139 291478 C 341 70.97 1355 manual 2 ALIGNMENT 946 YS2-14l10.q1k chr13 1093 31 154268 155339 C 1063 97.08 1339 accept 0 ALIGNMENT 1074 YS2-14l10.p1k chr13 31 1263 151050 152282 F 1233 97.16 1263 accept 0 ALIGNMENT 978 YS2-14l11.q1k chr14 1183 36 418866 420030 C 1148 96.34 1375 accept 0 ALIGNMENT 991 YS2-14l11.p1k chr14 25 1246 415200 416429 F 1222 95.01 1247 accept 0 ALIGNMENT 0 YS2-14l13.q1k chr06 875 169 226667 226666 C 707 0.00 1327 reject_low 13 ALIGNMENT 0 YS2-14l13.q1k chr04 875 169 1352448 1352447 C 707 0.00 1327 reject_low 6 ALIGNMENT 0 YS2-14l13.q1k chr05 875 168 135418 135417 C 708 0.00 1327 reject_low 5 ALIGNMENT 87 YS2-14l13.q1k chr05 167 77 435740 435831 C 91 98.90 1327 reject_low 3 ALIGNMENT 81 YS2-14l13.q1k chr11 86 167 202644 202725 F 82 100.00 1327 reject_low 9 ALIGNMENT 69 YS2-14l13.q1k chr06 168 87 226666 226747 C 82 96.34 1327 reject_low 13 ALIGNMENT 0 YS2-14l13.q1k chr11 168 875 202725 202724 F 708 0.00 1327 reject_low 9 ALIGNMENT 0 YS2-14l13.q1k chr10 160 875 414953 414952 F 716 0.00 1327 reject_low 4 ALIGNMENT 77 YS2-14l13.q1k chr10 74 159 414868 414953 F 86 96.51 1327 reject_low 4 ALIGNMENT 75 YS2-14l13.q1k chr04 82 159 1201735 1201812 F 78 98.72 1327 reject_low 12 ALIGNMENT 85 YS2-14l13.q1k chr05 167 77 135417 135507 C 91 97.80 1327 reject_low 5 ALIGNMENT 0 YS2-14l13.q1k chr09 875 168 300220 300219 C 708 0.00 1327 reject_low 7 ALIGNMENT 0 YS2-14l13.q1k chr07 62 85 122272 122271 F 24 0.00 1327 reject_low 10 ALIGNMENT 1056 YS2-14l13.p1k chr16 1295 38 584580 585832 C 1258 95.39 1466 accept 0 ALIGNMENT 0 YS2-14l13.q1k chr05 76 62 435832 435831 C 15 0.00 1327 reject_low 3 ALIGNMENT 0 YS2-14l13.q1k chr11 62 85 202644 202643 F 24 0.00 1327 reject_low 9 ALIGNMENT 0 YS2-14l13.q1k chr13 85 62 480694 480693 C 24 0.00 1327 reject_low 11 ALIGNMENT 0 YS2-14l13.q1k chr07 169 875 122355 122354 F 707 0.00 1327 reject_low 10 ALIGNMENT 82 YS2-14l13.q1k chr07 86 168 876398 876480 F 83 100.00 1327 reject_low 8 ALIGNMENT 83 YS2-14l13.q1k chr04 168 77 1352447 1352538 C 92 96.74 1327 reject_low 6 ALIGNMENT 994 YS2-14l13.q1k chr16 28 1172 581998 583160 F 1145 97.03 1327 accept 0 ALIGNMENT 0 YS2-14l13.q1k chr07 169 875 876480 876479 F 707 0.00 1327 reject_low 8 ALIGNMENT 0 YS2-14l13.q1k chr05 76 62 135508 135507 C 15 0.00 1327 reject_low 5 ALIGNMENT 0 YS2-14l13.q1k chr06 86 62 226748 226747 C 25 0.00 1327 reject_low 13 ALIGNMENT 77 YS2-14l13.q1k chr09 167 77 300219 300308 C 91 95.60 1327 reject_low 7 ALIGNMENT 0 YS2-14l13.q1k chr04 160 875 1201812 1201811 F 716 0.00 1327 reject_low 12 ALIGNMENT 78 YS2-14l13.q1k chr07 86 168 122272 122355 F 83 98.80 1327 reject_low 10 ALIGNMENT 0 YS2-14l13.q1k chr13 875 169 480613 480612 C 707 0.00 1327 reject_low 11 ALIGNMENT 77 YS2-14l13.q1k chr13 168 86 480612 480693 C 83 98.80 1327 reject_low 11 ALIGNMENT 87 YS2-14l13.q1k chr03 172 82 151268 151358 C 91 98.90 1327 reject_low 1 ALIGNMENT 0 YS2-14l13.q1k chr03 81 62 151359 151358 C 20 0.00 1327 reject_low 1 ALIGNMENT 0 YS2-14l13.q1k chr04 76 62 1352539 1352538 C 15 0.00 1327 reject_low 6 ALIGNMENT 0 YS2-14l13.q1k chr05 875 168 435741 435740 C 708 0.00 1327 reject_low 3 ALIGNMENT 0 YS2-14l13.q1k chr09 76 62 300309 300308 C 15 0.00 1327 reject_low 7 ALIGNMENT 0 YS2-14l13.q1k chr07 62 85 876398 876397 F 24 0.00 1327 reject_low 8 ALIGNMENT 87 YS2-14l13.q1k chr07 169 74 185710 185805 C 96 96.88 1327 reject_low 2 ALIGNMENT 0 YS2-14l13.q1k chr04 62 81 1201735 1201734 F 20 0.00 1327 reject_low 12 ALIGNMENT 0 YS2-14l13.q1k chr07 875 170 185711 185710 C 706 0.00 1327 reject_low 2 ALIGNMENT 0 YS2-14l13.q1k chr03 875 173 151269 151268 C 703 0.00 1327 reject_low 1 ALIGNMENT 46 YS2-14l14.q1k vc_4 309 486 1885 2074 F 178 77.53 614 reject_vc 12 ALIGNMENT 0 YS2-14l14.q1k vc_4 236 62 113 112 C 175 0.00 614 reject_vc 9 ALIGNMENT 21 YS2-14l14.p1k chr04 503 478 370549 370574 C 26 96.15 563 reject_low 11 ALIGNMENT 42 YS2-14l14.q1k vc_4 298 237 48 112 C 62 91.94 614 reject_vc 9 ALIGNMENT 0 YS2-14l14.p1k chr04 563 504 370550 370549 C 60 0.00 563 reject_low 11 ALIGNMENT 0 YS2-14l14.p1k chr04 477 62 370575 370574 C 416 0.00 563 reject_low 11 ALIGNMENT 323 YS2-14l14.q1k vc_5 1 486 2556 3058 F 486 89.92 614 reject_vc 1 ALIGNMENT 104 YS2-14l14.p1k chr04 362 544 219664 219846 F 183 85.79 563 reject_low 7 ALIGNMENT 0 YS2-14l14.p1k chr04 62 361 219664 219663 F 300 0.00 563 reject_low 7 ALIGNMENT 275 YS2-14l14.q1k vc_3 1 294 2689 2985 F 294 98.30 614 reject_vc 6 ALIGNMENT 42 YS2-14l14.q1k vc_4 237 294 1548 1607 F 58 93.10 614 reject_vc 12 ALIGNMENT 43 YS2-14l14.q1k vc_7 404 301 4591 4699 C 104 81.73 614 reject_vc 8 ALIGNMENT 42 YS2-14l14.q1k vc_4 294 237 6280 6339 C 58 93.10 614 reject_vc 10 ALIGNMENT 470 YS2-14l14.p1k chr04 27 545 123531 124051 F 519 99.04 563 accept 0 ALIGNMENT 0 YS2-14l14.p1k chr04 546 563 124051 124050 F 18 0.00 563 accept 0 ALIGNMENT 0 YS2-14l14.q1k vc_7 53 54 5172 6360 C 0 0.00 614 reject_vc 8 ALIGNMENT 275 YS2-14l14.q1k vc_2 1 294 2322 2618 F 294 98.30 614 reject_vc 5 ALIGNMENT 0 YS2-14l14.q1k vc_7 300 295 4700 4927 C 6 0.00 614 reject_vc 8 ALIGNMENT 0 YS2-14l14.p1k chr04 545 563 219846 219845 F 19 0.00 563 reject_low 7 ALIGNMENT 275 YS2-14l14.q1k vc_1 1 294 2689 2985 F 294 98.30 614 reject_vc 4 ALIGNMENT 323 YS2-14l14.q1k vc_7 486 1 2067 2569 C 486 89.92 614 reject_vc 2 ALIGNMENT 220 YS2-14l14.q1k vc_7 294 53 4928 5172 C 242 97.52 614|0,1 reject_vc 8 ALIGNMENT 311 YS2-14l14.q1k vc_4 404 1 5240 5654 C 404 93.07 614 reject_vc 3 ALIGNMENT 0 YS2-14l14.q1k vc_4 295 308 1608 1884 F 14 0.00 614 reject_vc 12 ALIGNMENT 0 YS2-14l14.q1k vc_4 236 62 6340 6339 C 175 0.00 614 reject_vc 10 ALIGNMENT 51 YS2-14l14.q1k vc_7 54 3 6360 6411 C 52 100.00 614|1,0 reject_vc 8 ALIGNMENT 0 YS2-14l14.q1k vc_4 62 236 1548 1547 F 175 0.00 614 reject_vc 12 ALIGNMENT 1010 YS2-14l15.p1k chr09 31 1192 281239 282410 F 1162 96.82 1336 accept 0 ALIGNMENT 966 YS2-14l15.q1k chr09 1178 32 285433 286584 C 1147 95.99 1353 accept 0 ALIGNMENT 922 YS2-14l17.p1k chr14 1077 34 653671 654729 C 1044 96.93 1283 accept 0 ALIGNMENT 982 YS2-14l17.q1k chr14 37 1161 653443 654581 F 1125 96.36 1364 accept 0 ALIGNMENT 0 YS2-14l18.p1k vc_1 892 62 2106 2105 C 831 0.00 1294 reject_low 2 ALIGNMENT 0 YS2-14l18.p1k vc_5 892 62 5026 5025 C 831 0.00 1294 reject_low 4 ALIGNMENT 142 YS2-14l18.p1k vc_5 1105 893 4798 5025 C 213 91.08 1294 reject_low 4 ALIGNMENT 0 YS2-14l18.p1k vc_7 62 892 100 99 F 831 0.00 1294 reject_low 5 ALIGNMENT 142 YS2-14l18.p1k vc_7 893 1105 100 327 F 213 91.08 1294 reject_low 5 ALIGNMENT 142 YS2-14l18.p1k vc_7 893 1105 13562 13789 F 213 91.08 1294 reject_low 6 ALIGNMENT 142 YS2-14l18.p1k vc_1 1105 893 1878 2105 C 213 91.08 1294 reject_low 2 ALIGNMENT 0 YS2-14l18.p1k vc_7 62 892 13562 13561 F 831 0.00 1294 reject_low 6 ALIGNMENT 0 YS2-14l18.p1k vc_4 62 892 5871 5870 F 831 0.00 1294 reject_low 3 ALIGNMENT 142 YS2-14l18.p1k vc_4 893 1105 5871 6098 F 213 91.08 1294 reject_low 3 ALIGNMENT 699 YS2-14l18.p1k chrm 31 871 23573 24413 F 841 100.00 1294 accept_chi 0 ALIGNMENT 692 YS2-14l18.q1k chrm 883 37 23573 24417 C 847 99.65 1379 accept_chi 1 ALIGNMENT 1016 YS2-14l19.p1k chr15 1233 32 34354 35575 C 1202 96.09 1249 accept 0 ALIGNMENT 968 YS2-14l19.q1k chr15 33 1191 33374 34549 F 1159 95.94 1326 accept 0 ALIGNMENT 0 YS2-14l20.q1k vc_7 62 236 13525 13524 F 175 0.00 274 reject_low 12 ALIGNMENT 0 YS2-14l20.q1k vc_4 62 234 5832 5831 F 173 0.00 274 reject_low 10 ALIGNMENT 0 YS2-14l20.q1k vc_1 234 62 2512 2511 C 173 0.00 274 reject_low 8 ALIGNMENT 36 YS2-14l20.q1k vc_5 271 236 1 36 C 36 100.00 274 reject_low 13 ALIGNMENT 40 YS2-14l20.q1k vc_4 235 274 5832 5871 F 40 100.00 274 reject_low 10 ALIGNMENT 0 YS2-14l20.q1k vc_3 234 62 2512 2511 C 173 0.00 274 reject_low 9 ALIGNMENT 39 YS2-14l20.q1k vc_5 274 236 5025 5063 C 39 100.00 274 reject_low 11 ALIGNMENT 0 YS2-14l20.q1k vc_5 235 62 5064 5063 C 174 0.00 274 reject_low 11 ALIGNMENT 466 YS2-14l20.p1k vc_6 1 603 3712 4313 F 603 93.20 662 reject_vc 7 ALIGNMENT 463 YS2-14l20.p1k vc_7 1 660 13918 14581 F 660 90.91 662 reject_vc 6 ALIGNMENT 469 YS2-14l20.p1k vc_2 660 1 1086 1749 C 660 91.21 662 reject_vc 3 ALIGNMENT 40 YS2-14l20.q1k vc_1 274 235 2472 2511 C 40 100.00 274 reject_low 8 ALIGNMENT 472 YS2-14l20.p1k vc_5 660 1 4006 4669 C 660 91.36 662 reject_vc 1 ALIGNMENT 0 YS2-14l20.q1k chr07 274 236 108309 108308 C 39 0.00 274 accept 0 ALIGNMENT 40 YS2-14l20.q1k vc_3 274 235 2472 2511 C 40 100.00 274 reject_low 9 ALIGNMENT 198 YS2-14l20.q1k chr07 235 30 108308 108513 C 206 100.00 274 accept 0 ALIGNMENT 469 YS2-14l20.p1k vc_1 660 1 1086 1749 C 660 91.21 662 reject_vc 2 ALIGNMENT 38 YS2-14l20.q1k vc_7 237 274 13525 13562 F 38 100.00 274 reject_low 12 ALIGNMENT 463 YS2-14l20.p1k vc_7 1 660 456 1119 F 660 90.91 662 reject_vc 5 ALIGNMENT 0 YS2-14l20.q1k vc_5 235 62 37 36 C 174 0.00 274 reject_low 13 ALIGNMENT 469 YS2-14l20.p1k vc_3 660 1 1086 1749 C 660 91.21 662 reject_vc 4 ALIGNMENT 1005 YS2-14l21.q1k chr12 1219 31 791798 793001 C 1189 96.80 1297 accept 0 ALIGNMENT 975 YS2-14l21.p1k chr12 30 1159 791593 792738 F 1130 96.90 1321 accept 0 ALIGNMENT 38 YS2-14l23.q1k vc_7 212 249 13525 13562 F 38 100.00 249 reject_low 6 ALIGNMENT 41 YS2-14l23.q1k vc_4 209 249 5831 5871 F 41 100.00 249 reject_low 4 ALIGNMENT 0 YS2-14l23.p1k chr04 202 218 1214102 1214101 F 17 0.00 218 accept_chi 1 ALIGNMENT 0 YS2-14l23.q1k vc_3 208 62 2513 2512 C 147 0.00 249 reject_low 3 ALIGNMENT 0 YS2-14l23.q1k vc_7 62 211 13525 13524 F 150 0.00 249 reject_low 6 ALIGNMENT 167 YS2-14l23.p1k chr04 26 201 1213925 1214102 F 176 98.86 218 accept_chi 1 ALIGNMENT 0 YS2-14l23.q1k vc_1 208 62 2513 2512 C 147 0.00 249 reject_low 2 ALIGNMENT 0 YS2-14l23.q1k chr04 249 210 1213923 1213922 C 40 0.00 249 accept_chi 0 ALIGNMENT 39 YS2-14l23.q1k vc_5 249 211 5025 5063 C 39 100.00 249 reject_low 5 ALIGNMENT 0 YS2-14l23.q1k vc_4 62 208 5831 5830 F 147 0.00 249 reject_low 4 ALIGNMENT 0 YS2-14l23.q1k vc_5 210 62 5064 5063 C 149 0.00 249 reject_low 5 ALIGNMENT 41 YS2-14l23.q1k vc_3 249 209 2472 2512 C 41 100.00 249 reject_low 3 ALIGNMENT 36 YS2-14l23.q1k vc_5 246 211 1 36 C 36 100.00 249 reject_low 7 ALIGNMENT 0 YS2-14l23.q1k vc_5 210 62 37 36 C 149 0.00 249 reject_low 7 ALIGNMENT 41 YS2-14l23.q1k vc_1 249 209 2472 2512 C 41 100.00 249 reject_low 2 ALIGNMENT 176 YS2-14l23.q1k chr04 209 28 1213922 1214102 C 182 99.45 249 accept_chi 0 ALIGNMENT 178 YS2-14m01.p1k chr15 1038 635 326199 326596 C 404 84.65 1352 accept 0 ALIGNMENT 983 YS2-14m02.q1k chr07 1172 39 123229 124375 C 1134 95.50 1354 accept 0 ALIGNMENT 1013 YS2-14m02.p1k chr07 32 1189 120507 121681 F 1158 96.55 1292 accept 0 ALIGNMENT 0 YS2-14m04.p1k vc_4 62 945 5875 5874 F 884 0.00 1303 reject_low 7 ALIGNMENT 0 YS2-14m04.q1k vc_1 934 62 2513 2512 C 873 0.00 1334 reject_low 16 ALIGNMENT 0 YS2-14m04.q1k vc_7 974 62 2728 2727 C 913 0.00 1334 reject_low 3 ALIGNMENT 99 YS2-14m04.q1k vc_4 975 1125 6353 6514 F 151 91.39 1334|1,0 reject_low 14 ALIGNMENT 22 YS2-14m04.p1k vc_3 972 946 2441 2468 C 27 96.30 1303 reject_low 20 ALIGNMENT 0 YS2-14m04.q1k vc_4 62 934 5831 5830 F 873 0.00 1334 reject_low 14 ALIGNMENT 0 YS2-14m04.q1k vc_4 976 975 5872 6353 F 0 0.00 1334 reject_low 14 ALIGNMENT 0 YS2-14m04.q1k vc_5 936 62 5064 5063 C 875 0.00 1334 reject_low 21 ALIGNMENT 41 YS2-14m04.q1k vc_3 975 935 2472 2512 C 41 100.00 1334 reject_low 18 ALIGNMENT 0 YS2-14m04.p1k vc_1 945 62 2102 2101 C 884 0.00 1303 reject_low 4 ALIGNMENT 0 YS2-14m04.q1k vc_4 974 62 1535 1534 C 913 0.00 1334 reject_low 15 ALIGNMENT 104 YS2-14m04.q1k vc_1 975 1129 2531 2696 F 155 91.61 1334 reject_low 9 ALIGNMENT 169 YS2-14m04.p1k vc_2 1183 946 1857 2101 C 238 92.02 1303 reject_low 5 ALIGNMENT 169 YS2-14m04.p1k vc_7 946 1183 13566 13810 F 238 92.02 1303 reject_low 8 ALIGNMENT 864 YS2-14m04.q1k chr02 37 934 469235 470132 F 898 99.55 1334 accept_chi 1 ALIGNMENT 0 YS2-14m04.q1k vc_5 62 974 2398 2397 F 913 0.00 1334 reject_low 2 ALIGNMENT 0 YS2-14m04.p1k vc_7 62 945 104 103 F 884 0.00 1303 reject_low 3 ALIGNMENT 0 YS2-14m04.q1k vc_2 62 974 2164 2163 F 913 0.00 1334 reject_low 10 ALIGNMENT 104 YS2-14m04.q1k vc_4 1129 975 5647 5812 C 155 91.61 1334 reject_low 12 ALIGNMENT 104 YS2-14m04.q1k vc_7 1129 975 2562 2727 C 155 91.61 1334 reject_low 3 ALIGNMENT 0 YS2-14m04.q1k vc_2 934 62 2146 2145 C 873 0.00 1334 reject_low 17 ALIGNMENT 169 YS2-14m04.p1k vc_5 1183 946 4777 5021 C 238 92.02 1303 reject_low 2 ALIGNMENT 68 YS2-14m04.q1k vc_4 1056 975 1450 1534 C 82 96.34 1334 reject_low 15 ALIGNMENT 169 YS2-14m04.p1k vc_4 946 1183 5875 6119 F 238 92.02 1303 reject_low 7 ALIGNMENT 0 YS2-14m04.q1k vc_1 62 974 2531 2530 F 913 0.00 1334 reject_low 9 ALIGNMENT 0 YS2-14m04.q1k vc_3 934 62 2513 2512 C 873 0.00 1334 reject_low 18 ALIGNMENT 0 YS2-14m04.p1k vc_1 945 62 2469 2468 C 884 0.00 1303 reject_low 19 ALIGNMENT 104 YS2-14m04.q1k vc_3 975 1129 2531 2696 F 155 91.61 1334 reject_low 11 ALIGNMENT 0 YS2-14m04.q1k vc_4 62 974 126 125 F 913 0.00 1334 reject_low 13 ALIGNMENT 41 YS2-14m04.q1k vc_2 975 935 2105 2145 C 41 100.00 1334 reject_low 17 ALIGNMENT 38 YS2-14m04.q1k vc_7 938 975 13525 13562 F 38 100.00 1334 reject_low 22 ALIGNMENT 878 YS2-14m04.p1k chr02 925 28 469235 470132 C 898 99.78 1303 accept_chi 0 ALIGNMENT 0 YS2-14m04.p1k vc_5 945 62 5022 5021 C 884 0.00 1303 reject_low 2 ALIGNMENT 104 YS2-14m04.q1k vc_2 975 1129 2164 2329 F 155 91.61 1334 reject_low 10 ALIGNMENT 0 YS2-14m04.q1k vc_7 62 937 13525 13524 F 876 0.00 1334 reject_low 22 ALIGNMENT 36 YS2-14m04.q1k vc_5 972 937 1 36 C 36 100.00 1334 reject_low 23 ALIGNMENT 169 YS2-14m04.p1k vc_7 946 1183 104 348 F 238 92.02 1303 reject_low 3 ALIGNMENT 0 YS2-14m04.q1k vc_5 936 62 37 36 C 875 0.00 1334 reject_low 23 ALIGNMENT 0 YS2-14m04.q1k vc_3 62 974 2531 2530 F 913 0.00 1334 reject_low 11 ALIGNMENT 41 YS2-14m04.q1k vc_4 935 975 5831 5871 F 41 100.00 1334 reject_low 14 ALIGNMENT 39 YS2-14m04.q1k vc_5 975 937 5025 5063 C 39 100.00 1334 reject_low 21 ALIGNMENT 169 YS2-14m04.p1k vc_3 1183 946 1857 2101 C 238 92.02 1303 reject_low 6 ALIGNMENT 0 YS2-14m04.q1k vc_4 974 62 5813 5812 C 913 0.00 1334 reject_low 12 ALIGNMENT 22 YS2-14m04.p1k vc_1 972 946 2441 2468 C 27 96.30 1303 reject_low 19 ALIGNMENT 0 YS2-14m04.p1k vc_3 945 62 2469 2468 C 884 0.00 1303 reject_low 20 ALIGNMENT 0 YS2-14m04.p1k vc_2 945 62 2102 2101 C 884 0.00 1303 reject_low 5 ALIGNMENT 104 YS2-14m04.q1k vc_5 975 1129 2398 2563 F 155 91.61 1334 reject_low 2 ALIGNMENT 169 YS2-14m04.p1k vc_1 1183 946 1857 2101 C 238 92.02 1303 reject_low 4 ALIGNMENT 99 YS2-14m04.q1k vc_4 975 1125 126 287 F 151 91.39 1334 reject_low 13 ALIGNMENT 41 YS2-14m04.q1k vc_1 975 935 2472 2512 C 41 100.00 1334 reject_low 16 ALIGNMENT 0 YS2-14m04.p1k vc_3 945 62 2102 2101 C 884 0.00 1303 reject_low 6 ALIGNMENT 0 YS2-14m04.p1k vc_7 62 945 13566 13565 F 884 0.00 1303 reject_low 8 ALIGNMENT 1012 YS2-14m05.p1k chr09 1244 30 94049 95270 C 1215 95.39 1313 accept 0 ALIGNMENT 940 YS2-14m05.q1k chr09 34 1105 90647 91727 F 1072 96.64 1296 accept 0 ALIGNMENT 41 YS2-14m06.q1k vc_3 237 197 2472 2512 C 41 100.00 237 reject_low 6 ALIGNMENT 0 YS2-14m06.q1k vc_5 187 62 5076 5075 C 126 0.00 237 reject_low 2 ALIGNMENT 0 YS2-14m06.q1k vc_1 196 62 2513 2512 C 135 0.00 237 reject_low 4 ALIGNMENT 147 YS2-14m06.q1k chr02 196 41 524969 525124 C 156 99.36 237 accept_chi 1 ALIGNMENT 0 YS2-14m06.q1k vc_5 187 62 49 48 C 126 0.00 237 reject_low 3 ALIGNMENT 41 YS2-14m06.q1k vc_1 237 197 2472 2512 C 41 100.00 237 reject_low 4 ALIGNMENT 0 YS2-14m06.q1k vc_4 62 196 5831 5830 F 135 0.00 237 reject_low 7 ALIGNMENT 38 YS2-14m06.q1k vc_7 200 237 13525 13562 F 38 100.00 237 reject_low 8 ALIGNMENT 40 YS2-14m06.q1k vc_5 234 188 1 48 C 47 95.74 237 reject_low 3 ALIGNMENT 0 YS2-14m06.q1k vc_2 196 62 2146 2145 C 135 0.00 237 reject_low 5 ALIGNMENT 0 YS2-14m06.q1k vc_3 196 62 2513 2512 C 135 0.00 237 reject_low 6 ALIGNMENT 146 YS2-14m06.p1k chr02 36 190 524970 525124 F 155 99.35 209 accept_chi 0 ALIGNMENT 0 YS2-14m06.q1k vc_7 62 199 13525 13524 F 138 0.00 237 reject_low 8 ALIGNMENT 41 YS2-14m06.q1k vc_4 197 237 5831 5871 F 41 100.00 237 reject_low 7 ALIGNMENT 41 YS2-14m06.q1k vc_2 237 197 2105 2145 C 41 100.00 237 reject_low 5 ALIGNMENT 0 YS2-14m06.p1k chr02 191 209 525124 525123 F 19 0.00 209 accept_chi 0 ALIGNMENT 0 YS2-14m06.q1k chr02 237 197 524970 524969 C 41 0.00 237 accept_chi 1 ALIGNMENT 43 YS2-14m06.q1k vc_5 237 188 5025 5075 C 50 96.00 237 reject_low 2 ALIGNMENT 247 YS2-14m07.q1k vc_7 303 53 4922 5172 C 251 99.60 750|0,1 reject_low 12 ALIGNMENT 296 YS2-14m07.p1k vc_7 1 476 13918 14384 F 476 88.87 499 reject_low 6 ALIGNMENT 302 YS2-14m07.p1k vc_1 476 1 1283 1749 C 476 89.29 499 reject_low 2 ALIGNMENT 302 YS2-14m07.p1k vc_6 1 476 3712 4178 F 476 89.29 499 reject_low 5 ALIGNMENT 0 YS2-14m07.q1k vc_4 237 62 6340 6339 C 176 0.00 750 reject_low 14 ALIGNMENT 0 YS2-14m07.q1k vc_4 62 237 1548 1547 F 176 0.00 750 reject_low 11 ALIGNMENT 473 YS2-14m07.q1k vc_5 1 671 2556 3242 F 671 91.36 750 reject_vc 0 ALIGNMENT 87 YS2-14m07.q1k vc_7 419 305 4583 4699 C 115 93.04 750 reject_low 12 ALIGNMENT 302 YS2-14m07.p1k vc_5 476 1 4203 4669 C 476 89.29 499 reject_vc 0 ALIGNMENT 302 YS2-14m07.q1k vc_3 1 303 2689 2991 F 303 100.00 750 reject_low 10 ALIGNMENT 302 YS2-14m07.p1k vc_3 476 1 1283 1749 C 476 89.29 499 reject_low 4 ALIGNMENT 302 YS2-14m07.q1k vc_1 1 303 2689 2991 F 303 100.00 750 reject_low 8 ALIGNMENT 65 YS2-14m07.q1k vc_4 304 238 46 112 C 67 100.00 750 reject_low 13 ALIGNMENT 385 YS2-14m07.q1k vc_4 419 1 5232 5654 C 419 97.61 750 reject_low 7 ALIGNMENT 302 YS2-14m07.q1k vc_2 1 303 2322 2624 F 303 100.00 750 reject_low 9 ALIGNMENT 0 YS2-14m07.q1k vc_4 237 62 113 112 C 176 0.00 750 reject_low 13 ALIGNMENT 163 YS2-14m07.q1k vc_4 308 599 1879 2176 F 292 86.99 750 reject_low 11 ALIGNMENT 296 YS2-14m07.p1k vc_7 1 476 456 922 F 476 88.87 499 reject_low 1 ALIGNMENT 0 YS2-14m07.q1k vc_4 305 307 1615 1878 F 3 0.00 750 reject_low 11 ALIGNMENT 0 YS2-14m07.q1k vc_7 53 54 5172 6360 C 0 0.00 750 reject_low 12 ALIGNMENT 65 YS2-14m07.q1k vc_4 238 304 1548 1614 F 67 100.00 750 reject_low 11 ALIGNMENT 302 YS2-14m07.p1k vc_2 476 1 1283 1749 C 476 89.29 499 reject_low 3 ALIGNMENT 65 YS2-14m07.q1k vc_4 304 238 6273 6339 C 67 100.00 750 reject_low 14 ALIGNMENT 472 YS2-14m07.q1k vc_7 599 1 1965 2569 C 599 93.66 750 reject_low 1 ALIGNMENT 0 YS2-14m07.q1k vc_7 304 304 4700 4921 C 1 0.00 750 reject_low 12 ALIGNMENT 51 YS2-14m07.q1k vc_7 54 3 6360 6411 C 52 100.00 750|1,0 reject_low 12 ALIGNMENT 957 YS2-14m08.q1k chr12 39 1062 462272 463305 F 1024 98.34 1349 accept 1 ALIGNMENT 1077 YS2-14m08.p1k chr12 1232 41 465569 466776 C 1192 97.40 1297 accept 1 ALIGNMENT 1077 YS2-14m08.p1k chr12 1232 41 456432 457639 C 1192 97.40 1297 accept 0 ALIGNMENT 957 YS2-14m08.q1k chr12 39 1062 453135 454168 F 1024 98.34 1349 accept 0 ALIGNMENT 981 YS2-14m10.p1k chr12 1193 27 832059 833227 C 1167 95.97 1205 accept 0 ALIGNMENT 1011 YS2-14m10.q1k chr12 40 1231 831944 833148 F 1192 96.14 1407 accept 0 ALIGNMENT 41 YS2-14m12.q1k vc_3 246 206 2472 2512 C 41 100.00 246 reject_low 2 ALIGNMENT 41 YS2-14m12.q1k vc_1 246 206 2472 2512 C 41 100.00 246 reject_low 1 ALIGNMENT 0 YS2-14m12.q1k vc_3 205 62 2513 2512 C 144 0.00 246 reject_low 2 ALIGNMENT 38 YS2-14m12.q1k vc_7 209 246 13525 13562 F 38 100.00 246 reject_low 5 ALIGNMENT 156 YS2-14m12.q1k chr07 29 205 878090 878266 F 177 96.61 246 accept 0 ALIGNMENT 0 YS2-14m12.q1k vc_1 205 62 2513 2512 C 144 0.00 246 reject_low 1 ALIGNMENT 0 YS2-14m12.q1k vc_5 207 62 5064 5063 C 146 0.00 246 reject_low 4 ALIGNMENT 0 YS2-14m12.q1k vc_5 207 62 37 36 C 146 0.00 246 reject_low 6 ALIGNMENT 39 YS2-14m12.q1k vc_5 246 208 5025 5063 C 39 100.00 246 reject_low 4 ALIGNMENT 150 YS2-14m12.p1k chr07 198 38 878098 878258 C 161 98.76 203 accept 0 ALIGNMENT 36 YS2-14m12.q1k vc_5 243 208 1 36 C 36 100.00 246 reject_low 6 ALIGNMENT 0 YS2-14m12.q1k vc_7 62 208 13525 13524 F 147 0.00 246 reject_low 5 ALIGNMENT 0 YS2-14m12.q1k chr07 206 246 878266 878265 F 41 0.00 246 accept 0 ALIGNMENT 0 YS2-14m12.q1k vc_4 62 205 5831 5830 F 144 0.00 246 reject_low 3 ALIGNMENT 41 YS2-14m12.q1k vc_4 206 246 5831 5871 F 41 100.00 246 reject_low 3 ALIGNMENT 815 YS2-14m13.q1k chr02 906 40 206217 207084 C 867 99.19 1342 accept_chi 0 ALIGNMENT 811 YS2-14m13.p1k chr02 31 894 206217 207085 F 864 99.19 1325 accept_chi 1 ALIGNMENT 951 YS2-14m16.p1k chr13 33 1132 708767 709881 F 1100 96.82 1349 accept 0 ALIGNMENT 949 YS2-14m16.q1k chr13 1112 36 713983 715072 C 1077 97.12 1356 accept 0 ALIGNMENT 41 YS2-14m17.q1k vc_4 337 377 5831 5871 F 41 100.00 377 reject_low 10 ALIGNMENT 0 YS2-14m17.q1k vc_5 338 62 5064 5063 C 277 0.00 377 reject_low 11 ALIGNMENT 0 YS2-14m17.q1k vc_3 336 62 2513 2512 C 275 0.00 377 reject_low 9 ALIGNMENT 379 YS2-14m17.p1k vc_3 591 1 1147 1749 C 591 89.51 591 reject_vc 4 ALIGNMENT 379 YS2-14m17.p1k vc_2 591 1 1147 1749 C 591 89.51 591 reject_vc 3 ALIGNMENT 0 YS2-14m17.q1k vc_5 338 62 37 36 C 277 0.00 377 reject_low 13 ALIGNMENT 372 YS2-14m17.p1k vc_7 1 591 456 1058 F 591 88.49 591 reject_vc 5 ALIGNMENT 0 YS2-14m17.q1k vc_1 336 62 2513 2512 C 275 0.00 377 reject_low 8 ALIGNMENT 379 YS2-14m17.p1k vc_1 591 1 1147 1749 C 591 89.51 591 reject_vc 2 ALIGNMENT 36 YS2-14m17.q1k vc_5 374 339 1 36 C 36 100.00 377 reject_low 13 ALIGNMENT 38 YS2-14m17.q1k vc_7 340 377 13525 13562 F 38 100.00 377 reject_low 12 ALIGNMENT 376 YS2-14m17.p1k vc_6 1 547 3712 4267 F 547 90.31 591 reject_vc 7 ALIGNMENT 372 YS2-14m17.p1k vc_7 1 591 13918 14520 F 591 88.49 591 reject_vc 6 ALIGNMENT 0 YS2-14m17.q1k chr15 377 339 542038 542037 C 39 0.00 377 accept 0 ALIGNMENT 0 YS2-14m17.q1k vc_7 62 339 13525 13524 F 278 0.00 377 reject_low 12 ALIGNMENT 265 YS2-14m17.q1k chr15 338 44 542037 542330 C 295 97.29 377 accept 0 ALIGNMENT 0 YS2-14m17.q1k vc_4 62 336 5831 5830 F 275 0.00 377 reject_low 10 ALIGNMENT 382 YS2-14m17.p1k vc_5 591 1 4067 4669 C 591 89.68 591 reject_vc 1 ALIGNMENT 41 YS2-14m17.q1k vc_3 377 337 2472 2512 C 41 100.00 377 reject_low 9 ALIGNMENT 41 YS2-14m17.q1k vc_1 377 337 2472 2512 C 41 100.00 377 reject_low 8 ALIGNMENT 39 YS2-14m17.q1k vc_5 377 339 5025 5063 C 39 100.00 377 reject_low 11 ALIGNMENT 0 YS2-14m19.q1k vc_4 62 207 5830 5829 F 146 0.00 249 reject_vc 6 ALIGNMENT 167 YS2-14m19.q1k chr04 30 208 1354953 1355132 F 179 98.88 249 manual 0 ALIGNMENT 36 YS2-14m19.q1k vc_5 246 211 1 36 C 36 100.00 249 reject_vc 9 ALIGNMENT 0 YS2-14m19.q1k vc_7 62 211 13525 13524 F 150 0.00 249 reject_vc 8 ALIGNMENT 0 YS2-14m19.q1k vc_3 207 62 2514 2513 C 146 0.00 249 reject_vc 5 ALIGNMENT 0 YS2-14m19.q1k vc_1 207 62 2514 2513 C 146 0.00 249 reject_vc 4 ALIGNMENT 0 YS2-14m19.p1k chr13 216 233 226565 226564 F 18 0.00 233 manual 3 ALIGNMENT 0 YS2-14m19.q1k vc_5 210 62 37 36 C 149 0.00 249 reject_vc 9 ALIGNMENT 39 YS2-14m19.q1k vc_5 249 211 5025 5063 C 39 100.00 249 reject_vc 7 ALIGNMENT 0 YS2-14m19.q1k vc_5 210 62 5064 5063 C 149 0.00 249 reject_vc 7 ALIGNMENT 42 YS2-14m19.q1k vc_3 249 208 2472 2513 C 42 100.00 249 reject_vc 5 ALIGNMENT 42 YS2-14m19.q1k vc_4 208 249 5830 5871 F 42 100.00 249 reject_vc 6 ALIGNMENT 154 YS2-14m19.p1k chr04 215 35 1354951 1355132 C 181 96.13 233 manual 1 ALIGNMENT 146 YS2-14m19.q1k chr13 208 30 226384 226563 C 179 94.97 249 manual 2 ALIGNMENT 0 YS2-14m19.p1k chr04 233 216 1354952 1354951 C 18 0.00 233 manual 1 ALIGNMENT 0 YS2-14m19.q1k chr04 209 249 1355132 1355131 F 41 0.00 249 manual 0 ALIGNMENT 0 YS2-14m19.q1k chr13 249 209 226385 226384 C 41 0.00 249 manual 2 ALIGNMENT 42 YS2-14m19.q1k vc_1 249 208 2472 2513 C 42 100.00 249 reject_vc 4 ALIGNMENT 38 YS2-14m19.q1k vc_7 212 249 13525 13562 F 38 100.00 249 reject_vc 8 ALIGNMENT 133 YS2-14m19.p1k chr13 35 215 226384 226565 F 181 92.27 233 manual 3 ALIGNMENT 1064 YS2-14m20.q1k chr07 43 1274 638450 639686 F 1232 96.02 1386 accept 0 ALIGNMENT 987 YS2-14m20.p1k chr07 1198 36 639380 640565 C 1163 95.96 1251 accept 0 ALIGNMENT 884 YS2-14m21.p1k chr12 1009 30 467852 468834 C 980 98.67 1289 accept 1 ALIGNMENT 94 YS2-14m21.p1k chr06 312 419 31622 31729 F 108 98.15 1289 reject_low 2 ALIGNMENT 884 YS2-14m21.p1k chr12 1009 30 458715 459697 C 980 98.67 1289 accept 0 ALIGNMENT 0 YS2-14m21.p1k chr06 62 311 31622 31621 F 250 0.00 1289 reject_low 2 ALIGNMENT 0 YS2-14m21.p1k chr06 420 837 31729 31728 F 418 0.00 1289 reject_low 2 ALIGNMENT 963 YS2-14m21.q1k chr12 53 1248 455330 456536 F 1196 94.48 1296 accept 0 ALIGNMENT 963 YS2-14m21.q1k chr12 53 1248 464467 465673 F 1196 94.48 1296 accept 1 ALIGNMENT 39 YS2-14m23.q1k vc_3 375 337 2472 2510 C 39 100.00 375 reject_low 5 ALIGNMENT 0 YS2-14m23.q1k vc_5 332 44 41 2375 C 289 0.00 375 reject_low 8 ALIGNMENT 0 YS2-14m23.q1k vc_7 62 337 13525 13524 F 276 0.00 375 reject_low 7 ALIGNMENT 39 YS2-14m23.q1k vc_1 375 337 2472 2510 C 39 100.00 375 reject_low 3 ALIGNMENT 268 YS2-14m23.p1k chr13 31 323 265406 265698 F 293 98.63 342 accept_chi 0 ALIGNMENT 0 YS2-14m23.q1k vc_2 336 62 2144 2143 C 275 0.00 375 reject_low 4 ALIGNMENT 272 YS2-14m23.q1k chr13 336 40 265403 265698 C 297 98.65 375 accept_chi 1 ALIGNMENT 0 YS2-14m23.q1k vc_1 336 62 2511 2510 C 275 0.00 375 reject_low 3 ALIGNMENT 39 YS2-14m23.q1k vc_2 375 337 2105 2143 C 39 100.00 375 reject_low 4 ALIGNMENT 43 YS2-14m23.q1k vc_5 375 333 5025 5067 C 43 100.00 375 reject_low 2 ALIGNMENT 0 YS2-14m23.p1k chr13 324 342 265698 265697 F 19 0.00 342 accept_chi 0 ALIGNMENT 38 YS2-14m23.q1k vc_7 338 375 13525 13562 F 38 100.00 375 reject_low 7 ALIGNMENT 0 YS2-14m23.q1k chr13 375 337 265404 265403 C 39 0.00 375 accept_chi 1 ALIGNMENT 0 YS2-14m23.q1k vc_3 336 62 2511 2510 C 275 0.00 375 reject_low 5 ALIGNMENT 0 YS2-14m23.q1k vc_4 62 336 5833 5832 F 275 0.00 375 reject_low 6 ALIGNMENT 39 YS2-14m23.q1k vc_4 337 375 5833 5871 F 39 100.00 375 reject_low 6 ALIGNMENT 20 YS2-14m23.q1k vc_5 43 21 2376 2398 C 23 95.65 375 reject_low 8 ALIGNMENT 0 YS2-14m23.q1k vc_5 332 62 5068 5067 C 271 0.00 375 reject_low 2 ALIGNMENT 40 YS2-14m23.q1k vc_5 372 333 1 40 C 40 100.00 375 reject_low 8 ALIGNMENT 0 YS2-14m24.q1k vc_4 237 62 113 112 C 176 0.00 844 reject_low 13 ALIGNMENT 618 YS2-14m24.q1k vc_5 1 812 2556 3371 F 812 92.49 844 reject_vc 0 ALIGNMENT 51 YS2-14m24.q1k vc_7 54 3 6360 6411 C 52 100.00 844|1,0 reject_low 12 ALIGNMENT 0 YS2-14m24.q1k vc_7 304 304 4700 4921 C 1 0.00 844 reject_low 12 ALIGNMENT 0 YS2-14m24.q1k vc_4 388 305 6274 6273 C 84 0.00 844 reject_low 14 ALIGNMENT 432 YS2-14m24.p1k vc_3 644 1 1113 1749 C 644 90.68 660 reject_low 5 ALIGNMENT 425 YS2-14m24.p1k vc_7 1 644 13918 14554 F 644 90.84 660 reject_low 7 ALIGNMENT 0 YS2-14m24.q1k vc_4 388 305 47 46 C 84 0.00 844 reject_low 13 ALIGNMENT 432 YS2-14m24.p1k vc_2 644 1 1113 1749 C 644 90.68 660 reject_low 4 ALIGNMENT 413 YS2-14m24.q1k vc_4 421 1 5232 5654 C 421 99.52 844 reject_low 8 ALIGNMENT 0 YS2-14m24.q1k vc_4 237 62 6340 6339 C 176 0.00 844 reject_low 14 ALIGNMENT 0 YS2-14m24.q1k vc_4 62 237 1548 1547 F 176 0.00 844 reject_low 2 ALIGNMENT 65 YS2-14m24.q1k vc_4 304 238 6273 6339 C 67 100.00 844 reject_low 14 ALIGNMENT 302 YS2-14m24.q1k vc_3 1 303 2689 2991 F 303 100.00 844 reject_low 11 ALIGNMENT 302 YS2-14m24.q1k vc_1 1 303 2689 2991 F 303 100.00 844 reject_low 9 ALIGNMENT 65 YS2-14m24.q1k vc_4 238 304 1548 1614 F 67 100.00 844 reject_low 2 ALIGNMENT 432 YS2-14m24.p1k vc_1 644 1 1113 1749 C 644 90.68 660 reject_low 3 ALIGNMENT 65 YS2-14m24.q1k vc_4 304 238 46 112 C 67 100.00 844 reject_low 13 ALIGNMENT 0 YS2-14m24.q1k vc_3 304 388 2991 2990 F 85 0.00 844 reject_low 11 ALIGNMENT 425 YS2-14m24.p1k vc_7 1 644 456 1092 F 644 90.84 660 reject_vc 1 ALIGNMENT 0 YS2-14m24.q1k vc_4 305 307 1615 1878 F 3 0.00 844 reject_low 2 ALIGNMENT 433 YS2-14m24.p1k vc_6 1 629 3712 4332 F 629 91.73 660 reject_low 6 ALIGNMENT 435 YS2-14m24.p1k vc_5 644 1 4033 4669 C 644 90.84 660 reject_vc 0 ALIGNMENT 247 YS2-14m24.q1k vc_7 303 53 4922 5172 C 251 99.60 844|0,1 reject_low 12 ALIGNMENT 618 YS2-14m24.q1k vc_7 812 1 1754 2569 C 812 92.49 844 reject_vc 1 ALIGNMENT 0 YS2-14m24.q1k vc_1 304 388 2991 2990 F 85 0.00 844 reject_low 9 ALIGNMENT 0 YS2-14m24.q1k vc_7 53 54 5172 6360 C 0 0.00 844 reject_low 12 ALIGNMENT 0 YS2-14m24.q1k vc_2 304 388 2624 2623 F 85 0.00 844 reject_low 10 ALIGNMENT 306 YS2-14m24.q1k vc_4 308 812 1879 2387 F 505 87.72 844 reject_low 2 ALIGNMENT 115 YS2-14m24.q1k vc_7 421 305 4583 4699 C 117 100.00 844 reject_low 12 ALIGNMENT 302 YS2-14m24.q1k vc_2 1 303 2322 2624 F 303 100.00 844 reject_low 10 ALIGNMENT 0 YS2-14n01.p1k chr04 716 849 721477 721476 F 134 0.00 1240 reject_low 1 ALIGNMENT 0 YS2-14n01.q1k chr08 396 62 252961 252960 C 335 0.00 1311 reject_low 3 ALIGNMENT 174 YS2-14n01.p1k chr04 313 715 721066 721477 F 403 82.13 1240 reject_low 1 ALIGNMENT 20 YS2-14n01.p1k chr04 474 429 601128 601176 C 46 82.61 1240 reject_low 4 ALIGNMENT 27 YS2-14n01.q1k chr07 357 416 70162 70221 F 60 85.00 1311 reject_low 2 ALIGNMENT 0 YS2-14n01.p1k chr04 849 475 601129 601128 C 375 0.00 1240 reject_low 4 ALIGNMENT 21 YS2-14n01.q1k chr08 425 397 252932 252960 C 29 93.10 1311 reject_low 3 ALIGNMENT 917 YS2-14n01.p1k chr12 31 1096 369417 370496 F 1066 96.81 1240 accept 0 ALIGNMENT 0 YS2-14n01.p1k chr04 62 312 721066 721065 F 251 0.00 1240 reject_low 1 ALIGNMENT 0 YS2-14n01.q1k chr07 62 356 70162 70161 F 295 0.00 1311 reject_low 2 ALIGNMENT 0 YS2-14n01.q1k chr07 417 859 70221 70220 F 443 0.00 1311 reject_low 2 ALIGNMENT 928 YS2-14n01.q1k chr12 1102 40 374638 375718 C 1063 97.46 1311 accept 0 ALIGNMENT 0 YS2-14n01.q1k chr08 859 426 252933 252932 C 434 0.00 1311 reject_low 3 ALIGNMENT 0 YS2-14n01.p1k chr04 428 62 601177 601176 C 367 0.00 1240 reject_low 4 ALIGNMENT 0 YS2-14n02.q1k vc_3 373 62 2513 2512 C 312 0.00 414 reject_low 10 ALIGNMENT 238 YS2-14n02.p1k vc_3 410 1 1345 1749 C 410 87.80 572 reject_vc 4 ALIGNMENT 238 YS2-14n02.p1k vc_7 1 410 13918 14322 F 410 88.05 572 reject_vc 6 ALIGNMENT 41 YS2-14n02.q1k vc_2 414 374 2105 2145 C 41 100.00 414 reject_low 9 ALIGNMENT 39 YS2-14n02.q1k vc_5 414 376 5025 5063 C 39 100.00 414 reject_low 12 ALIGNMENT 0 YS2-14n02.q1k vc_4 62 373 5831 5830 F 312 0.00 414 reject_low 11 ALIGNMENT 0 YS2-14n02.q1k vc_7 62 376 13525 13524 F 315 0.00 414 reject_low 13 ALIGNMENT 41 YS2-14n02.q1k vc_1 414 374 2472 2512 C 41 100.00 414 reject_low 8 ALIGNMENT 0 YS2-14n02.q1k vc_5 375 62 5064 5063 C 314 0.00 414 reject_low 12 ALIGNMENT 36 YS2-14n02.q1k vc_5 411 376 1 36 C 36 100.00 414 reject_low 14 ALIGNMENT 243 YS2-14n02.p1k vc_5 518 1 4154 4669 C 518 84.56 572 reject_vc 1 ALIGNMENT 283 YS2-14n02.q1k chr16 39 373 17251 17596 F 335 96.12 414 accept 0 ALIGNMENT 41 YS2-14n02.q1k vc_3 414 374 2472 2512 C 41 100.00 414 reject_low 10 ALIGNMENT 238 YS2-14n02.p1k vc_1 410 1 1345 1749 C 410 87.80 572 reject_vc 2 ALIGNMENT 0 YS2-14n02.q1k vc_5 375 62 37 36 C 314 0.00 414 reject_low 14 ALIGNMENT 238 YS2-14n02.p1k vc_2 410 1 1345 1749 C 410 87.80 572 reject_vc 3 ALIGNMENT 41 YS2-14n02.q1k vc_4 374 414 5831 5871 F 41 100.00 414 reject_low 11 ALIGNMENT 0 YS2-14n02.q1k vc_1 373 62 2513 2512 C 312 0.00 414 reject_low 8 ALIGNMENT 235 YS2-14n02.p1k vc_6 1 385 3712 4090 F 385 89.09 572 reject_vc 7 ALIGNMENT 0 YS2-14n02.q1k vc_2 373 62 2146 2145 C 312 0.00 414 reject_low 9 ALIGNMENT 238 YS2-14n02.p1k vc_7 1 410 456 860 F 410 88.05 572 reject_vc 5 ALIGNMENT 38 YS2-14n02.q1k vc_7 377 414 13525 13562 F 38 100.00 414 reject_low 13 ALIGNMENT 0 YS2-14n02.q1k chr16 374 414 17596 17595 F 41 0.00 414 accept 0 ALIGNMENT 1032 YS2-14n03.q1k chr11 1200 30 127783 128965 C 1171 96.75 1333 accept 0 ALIGNMENT 962 YS2-14n03.p1k chr11 26 1208 124674 125874 F 1183 94.93 1308 accept 0 ALIGNMENT 953 YS2-14n05.p1k chr12 32 1164 1055690 1056836 F 1133 96.03 1320 accept 0 ALIGNMENT 897 YS2-14n05.q1k chr03 1100 31 304734 305822 C 1070 95.61 1328 reject_low 1 ALIGNMENT 840 YS2-14n05.q1k chr12 1063 31 1060175 1061219 C 1033 94.58 1328 accept 0 ALIGNMENT 103 YS2-14n06.q1k chr16 39 164 353553 353678 F 126 96.83 204 accept 0 ALIGNMENT 38 YS2-14n06.q1k vc_7 167 204 13525 13562 F 38 100.00 204 reject_low 6 ALIGNMENT 41 YS2-14n06.q1k vc_3 204 164 2472 2512 C 41 100.00 204 reject_low 3 ALIGNMENT 0 YS2-14n06.q1k vc_4 62 163 5831 5830 F 102 0.00 204 reject_low 4 ALIGNMENT 41 YS2-14n06.q1k vc_1 204 164 2472 2512 C 41 100.00 204 reject_low 1 ALIGNMENT 41 YS2-14n06.q1k vc_4 164 204 5831 5871 F 41 100.00 204 reject_low 4 ALIGNMENT 0 YS2-14n06.q1k vc_3 163 62 2513 2512 C 102 0.00 204 reject_low 3 ALIGNMENT 0 YS2-14n06.q1k vc_7 62 166 13525 13524 F 105 0.00 204 reject_low 6 ALIGNMENT 0 YS2-14n06.q1k vc_1 163 62 2513 2512 C 102 0.00 204 reject_low 1 ALIGNMENT 37 YS2-14n06.q1k vc_5 201 162 1 40 C 40 97.50 204 reject_low 7 ALIGNMENT 0 YS2-14n06.q1k chr16 165 204 353678 353677 F 40 0.00 204 accept 0 ALIGNMENT 0 YS2-14n06.q1k vc_5 161 62 5068 5067 C 100 0.00 204 reject_low 5 ALIGNMENT 41 YS2-14n06.q1k vc_2 204 164 2105 2145 C 41 100.00 204 reject_low 2 ALIGNMENT 0 YS2-14n06.q1k vc_2 163 62 2146 2145 C 102 0.00 204 reject_low 2 ALIGNMENT 0 YS2-14n06.q1k vc_5 161 62 41 40 C 100 0.00 204 reject_low 7 ALIGNMENT 40 YS2-14n06.q1k vc_5 204 162 5025 5067 C 43 97.67 204 reject_low 5 ALIGNMENT 0 YS2-14n07.q1k vc_7 62 500 13525 13524 F 439 0.00 538 reject_low 6 ALIGNMENT 36 YS2-14n07.q1k vc_5 535 500 1 36 C 36 100.00 538 reject_low 7 ALIGNMENT 0 YS2-14n07.q1k vc_4 62 497 5831 5830 F 436 0.00 538 reject_low 4 ALIGNMENT 0 YS2-14n07.q1k vc_3 497 62 2513 2512 C 436 0.00 538 reject_low 3 ALIGNMENT 416 YS2-14n07.q1k chr15 497 40 86812 87269 C 458 98.47 538 accept_chi 0 ALIGNMENT 410 YS2-14n07.p1k chr15 32 490 86812 87269 F 459 98.04 509 accept_chi 1 ALIGNMENT 0 YS2-14n07.q1k vc_5 499 62 5064 5063 C 438 0.00 538 reject_low 5 ALIGNMENT 41 YS2-14n07.q1k vc_3 538 498 2472 2512 C 41 100.00 538 reject_low 3 ALIGNMENT 0 YS2-14n07.q1k vc_5 499 62 37 36 C 438 0.00 538 reject_low 7 ALIGNMENT 0 YS2-14n07.q1k chr15 538 498 86813 86812 C 41 0.00 538 accept_chi 0 ALIGNMENT 0 YS2-14n07.p1k chr15 491 509 87269 87268 F 19 0.00 509 accept_chi 1 ALIGNMENT 41 YS2-14n07.q1k vc_1 538 498 2472 2512 C 41 100.00 538 reject_low 2 ALIGNMENT 38 YS2-14n07.q1k vc_7 501 538 13525 13562 F 38 100.00 538 reject_low 6 ALIGNMENT 39 YS2-14n07.q1k vc_5 538 500 5025 5063 C 39 100.00 538 reject_low 5 ALIGNMENT 41 YS2-14n07.q1k vc_4 498 538 5831 5871 F 41 100.00 538 reject_low 4 ALIGNMENT 0 YS2-14n07.q1k vc_1 497 62 2513 2512 C 436 0.00 538 reject_low 2 ALIGNMENT 0 YS2-14n08.q1k vc_7 62 212 13525 13524 F 151 0.00 250 reject_low 6 ALIGNMENT 0 YS2-14n08.p1k chr04 215 232 1279944 1279943 F 18 0.00 232 accept_chi 0 ALIGNMENT 0 YS2-14n08.q1k chr04 250 213 1279762 1279761 C 38 0.00 250 accept_chi 1 ALIGNMENT 38 YS2-14n08.q1k vc_7 213 250 13525 13562 F 38 100.00 250 reject_low 6 ALIGNMENT 0 YS2-14n08.q1k vc_5 211 62 37 36 C 150 0.00 250 reject_low 7 ALIGNMENT 41 YS2-14n08.q1k vc_1 250 210 2472 2512 C 41 100.00 250 reject_low 2 ALIGNMENT 0 YS2-14n08.q1k vc_5 211 62 5064 5063 C 150 0.00 250 reject_low 5 ALIGNMENT 41 YS2-14n08.q1k vc_4 210 250 5831 5871 F 41 100.00 250 reject_low 4 ALIGNMENT 0 YS2-14n08.q1k vc_3 209 62 2513 2512 C 148 0.00 250 reject_low 3 ALIGNMENT 39 YS2-14n08.q1k vc_5 250 212 5025 5063 C 39 100.00 250 reject_low 5 ALIGNMENT 41 YS2-14n08.q1k vc_3 250 210 2472 2512 C 41 100.00 250 reject_low 3 ALIGNMENT 0 YS2-14n08.q1k vc_1 209 62 2513 2512 C 148 0.00 250 reject_low 2 ALIGNMENT 184 YS2-14n08.q1k chr04 212 29 1279761 1279944 C 184 100.00 250 accept_chi 1 ALIGNMENT 36 YS2-14n08.q1k vc_5 247 212 1 36 C 36 100.00 250 reject_low 7 ALIGNMENT 184 YS2-14n08.p1k chr04 31 214 1279761 1279944 F 184 100.00 232 accept_chi 0 ALIGNMENT 0 YS2-14n08.q1k vc_4 62 209 5831 5830 F 148 0.00 250 reject_low 4 ALIGNMENT 1031 YS2-14n09.q1k chr03 40 1204 245342 246520 F 1165 97.08 1380 accept_chi 1 ALIGNMENT 1052 YS2-14n09.p1k chr04 40 1220 916368 917547 F 1181 97.29 1220 accept_chi 0 ALIGNMENT 981 YS2-14n10.q1k chr10 41 1177 379645 380796 F 1137 96.04 1350 accept 0 ALIGNMENT 21 YS2-14n10.p1k chr01 502 539 141383 141420 F 38 86.84 1212 reject_low 1 ALIGNMENT 1070 YS2-14n10.p1k chr10 1210 37 380722 381904 C 1174 97.10 1212 accept 0 ALIGNMENT 80 YS2-14n10.p1k chr01 56 477 140937 141358 F 422 73.46 1212 reject_low 1 ALIGNMENT 0 YS2-14n10.p1k chr01 478 501 141359 141382 F 24 0.00 1212 reject_low 1 ALIGNMENT 0 YS2-14n10.p1k chr01 540 877 141420 141419 F 338 0.00 1212 reject_low 1 ALIGNMENT 0 YS2-14n12.q1k vc_4 62 477 5831 5830 F 416 0.00 518 reject_low 4 ALIGNMENT 426 YS2-14n12.q1k chr14 30 478 318607 319055 F 449 99.11 518 accept_chi 0 ALIGNMENT 0 YS2-14n12.q1k vc_3 477 62 2513 2512 C 416 0.00 518 reject_low 3 ALIGNMENT 41 YS2-14n12.q1k vc_3 518 478 2472 2512 C 41 100.00 518 reject_low 3 ALIGNMENT 0 YS2-14n12.q1k vc_5 479 62 5064 5063 C 418 0.00 518 reject_low 5 ALIGNMENT 39 YS2-14n12.q1k vc_5 518 480 5025 5063 C 39 100.00 518 reject_low 5 ALIGNMENT 38 YS2-14n12.q1k vc_7 481 518 13525 13562 F 38 100.00 518 reject_low 6 ALIGNMENT 36 YS2-14n12.q1k vc_5 515 480 1 36 C 36 100.00 518 reject_low 7 ALIGNMENT 421 YS2-14n12.p1k chr14 475 32 318607 319050 C 444 99.10 493 accept_chi 1 ALIGNMENT 0 YS2-14n12.q1k vc_7 62 480 13525 13524 F 419 0.00 518 reject_low 6 ALIGNMENT 0 YS2-14n12.q1k chr14 479 518 319055 319054 F 40 0.00 518 accept_chi 0 ALIGNMENT 0 YS2-14n12.q1k vc_5 479 62 37 36 C 418 0.00 518 reject_low 7 ALIGNMENT 41 YS2-14n12.q1k vc_1 518 478 2472 2512 C 41 100.00 518 reject_low 2 ALIGNMENT 0 YS2-14n12.q1k vc_1 477 62 2513 2512 C 416 0.00 518 reject_low 2 ALIGNMENT 0 YS2-14n12.p1k chr14 493 476 318608 318607 C 18 0.00 493 accept_chi 1 ALIGNMENT 41 YS2-14n12.q1k vc_4 478 518 5831 5871 F 41 100.00 518 reject_low 4 ALIGNMENT 960 YS2-14n13.q1k chr05 31 1174 129513 130644 F 1144 96.24 1377 accept 0 ALIGNMENT 961 YS2-14n13.p1k chr05 1167 31 134221 135358 C 1137 95.95 1377 accept 0 ALIGNMENT 1045 YS2-14n15.p1k chr14 1325 32 87493 88796 C 1294 93.35 1426 accept 0 ALIGNMENT 975 YS2-14n15.q1k chr14 45 1192 83803 84966 F 1148 96.17 1362 accept 0 ALIGNMENT 996 YS2-14n16.q1k chr14 1183 29 462202 463355 C 1155 96.02 1423 accept 0 ALIGNMENT 1022 YS2-14n16.p1k chr14 33 1237 460005 461213 F 1205 95.93 1422 accept 0 ALIGNMENT 922 YS2-14n17.p1k chr11 36 1087 245938 247006 F 1052 96.29 1279 accept 0 ALIGNMENT 1018 YS2-14n17.q1k chr11 1266 38 247604 248837 C 1229 94.96 1368 accept 0 ALIGNMENT 1035 YS2-14n18.p1k chr02 36 1282 331782 333033 F 1247 95.03 1371 accept 0 ALIGNMENT 972 YS2-14n18.q1k chr02 1146 51 334458 335566 C 1096 97.26 1356 accept 0 ALIGNMENT 0 YS2-14n19.q1k vc_5 639 62 37 36 C 578 0.00 678 reject_low 8 ALIGNMENT 0 YS2-14n19.q1k vc_5 639 62 5064 5063 C 578 0.00 678 reject_low 6 ALIGNMENT 41 YS2-14n19.q1k vc_1 678 638 2472 2512 C 41 100.00 678 reject_low 2 ALIGNMENT 0 YS2-14n19.q1k vc_3 637 62 2513 2512 C 576 0.00 678 reject_low 4 ALIGNMENT 41 YS2-14n19.q1k vc_4 638 678 5831 5871 F 41 100.00 678 reject_low 5 ALIGNMENT 39 YS2-14n19.q1k vc_5 678 640 5025 5063 C 39 100.00 678 reject_low 6 ALIGNMENT 0 YS2-14n19.q1k vc_7 62 640 13525 13524 F 579 0.00 678 reject_low 7 ALIGNMENT 36 YS2-14n19.q1k vc_5 675 640 1 36 C 36 100.00 678 reject_low 8 ALIGNMENT 41 YS2-14n19.q1k vc_2 678 638 2105 2145 C 41 100.00 678 reject_low 3 ALIGNMENT 0 YS2-14n19.p1k chr03 624 642 197433 197432 F 19 0.00 642 accept_chi 1 ALIGNMENT 571 YS2-14n19.q1k chr03 637 41 196838 197433 C 597 99.50 678 accept_chi 0 ALIGNMENT 0 YS2-14n19.q1k vc_1 637 62 2513 2512 C 576 0.00 678 reject_low 2 ALIGNMENT 0 YS2-14n19.q1k chr03 678 638 196839 196838 C 41 0.00 678 accept_chi 0 ALIGNMENT 38 YS2-14n19.q1k vc_7 641 678 13525 13562 F 38 100.00 678 reject_low 7 ALIGNMENT 0 YS2-14n19.q1k vc_4 62 637 5831 5830 F 576 0.00 678 reject_low 5 ALIGNMENT 568 YS2-14n19.p1k chr03 31 623 196840 197433 F 593 99.49 642 accept_chi 1 ALIGNMENT 41 YS2-14n19.q1k vc_3 678 638 2472 2512 C 41 100.00 678 reject_low 4 ALIGNMENT 0 YS2-14n19.q1k vc_2 637 62 2146 2145 C 576 0.00 678 reject_low 3 ALIGNMENT 0 YS2-14n20.q1k chr16 273 310 819570 819569 F 38 0.00 310 reject_low 9 ALIGNMENT 0 YS2-14n20.p1k chr14 82 286 569942 569941 F 205 0.00 286 reject_low 19 ALIGNMENT 150 YS2-14n20.q1k chr09 40 215 205042 205217 F 176 96.59 310|0,3 ambiguous_trans 0 ALIGNMENT 41 YS2-14n20.q1k vc_2 310 270 2105 2145 C 41 100.00 310 reject_low 24 ALIGNMENT 0 YS2-14n20.q1k chr09 213 212 205215 210647 F 0 0.00 310 ambiguous_trans 0 ALIGNMENT 39 YS2-14n20.q1k vc_5 310 272 5025 5063 C 39 100.00 310 reject_low 30 ALIGNMENT 0 YS2-14n20.p1k chr02 286 81 197498 197497 C 206 0.00 286 reject_low 27 ALIGNMENT 0 YS2-14n20.q1k vc_3 269 62 2513 2512 C 208 0.00 310 reject_low 25 ALIGNMENT 0 YS2-14n20.p1k chr09 94 95 205215 210647 C 0 0.00 286 ambiguous_trans 1 ALIGNMENT 0 YS2-14n20.q1k chr12 225 62 1052143 1052142 C 164 0.00 310 reject_low 6 ALIGNMENT 0 YS2-14n20.q1k vc_2 269 62 2146 2145 C 208 0.00 310 reject_low 24 ALIGNMENT 0 YS2-14n20.p1k chr12 82 286 1052142 1052141 F 205 0.00 286 reject_low 18 ALIGNMENT 0 YS2-14n20.q1k chr14 310 273 569897 569896 C 38 0.00 310 reject_low 7 ALIGNMENT 41 YS2-14n20.q1k vc_4 270 310 5831 5871 F 41 100.00 310 reject_low 26 ALIGNMENT 0 YS2-14n20.q1k chr16 310 273 880321 880320 C 38 0.00 310 reject_low 10 ALIGNMENT 41 YS2-14n20.q1k vc_3 310 270 2472 2512 C 41 100.00 310 reject_low 25 ALIGNMENT 38 YS2-14n20.q1k vc_7 273 310 13525 13562 F 38 100.00 310 reject_low 31 ALIGNMENT 0 YS2-14n20.q1k chr12 62 225 734803 734802 F 164 0.00 310 reject_low 5 ALIGNMENT 41 YS2-14n20.p1k chr05 34 80 551308 551353 F 47 97.87 286 reject_low 28 ALIGNMENT 42 YS2-14n20.p1k chr12 81 34 734803 734849 C 48 97.92 286 reject_low 17 ALIGNMENT 0 YS2-14n20.p1k chr16 286 82 819525 819524 C 205 0.00 286 reject_low 21 ALIGNMENT 0 YS2-14n20.q1k chr14 62 225 602312 602311 F 164 0.00 310 reject_low 8 ALIGNMENT 0 YS2-14n20.q1k chr12 310 273 1052097 1052096 C 38 0.00 310 reject_low 6 ALIGNMENT 46 YS2-14n20.q1k chr14 226 272 602312 602358 F 47 100.00 310 reject_low 8 ALIGNMENT 0 YS2-14n20.q1k chr14 225 62 569943 569942 C 164 0.00 310 reject_low 7 ALIGNMENT 41 YS2-14n20.q1k vc_1 310 270 2472 2512 C 41 100.00 310 reject_low 23 ALIGNMENT 0 YS2-14n20.q1k chr09 310 273 183466 183465 C 38 0.00 310 reject_low 2 ALIGNMENT 0 YS2-14n20.p1k chr14 286 82 602313 602312 C 205 0.00 286 reject_low 20 ALIGNMENT 42 YS2-14n20.p1k chr14 34 81 569896 569942 F 48 97.92 286 reject_low 19 ALIGNMENT 46 YS2-14n20.q1k chr16 272 226 880320 880366 C 47 100.00 310 reject_low 10 ALIGNMENT 0 YS2-14n20.q1k chr09 224 62 183513 183512 C 163 0.00 310 reject_low 2 ALIGNMENT 63 YS2-14n20.q1k chr09 210 272 210645 210707 F 63 100.00 310|3,0 ambiguous_trans 0 ALIGNMENT 0 YS2-14n20.p1k chr05 81 286 551353 551352 F 206 0.00 286 reject_low 28 ALIGNMENT 0 YS2-14n20.q1k vc_7 62 272 13525 13524 F 211 0.00 310 reject_low 31 ALIGNMENT 47 YS2-14n20.q1k chr09 272 225 183465 183512 C 48 100.00 310 reject_low 2 ALIGNMENT 0 YS2-14n20.q1k chr07 62 226 739127 739126 F 165 0.00 310 reject_low 13 ALIGNMENT 0 YS2-14n20.q1k chr07 273 310 739172 739171 F 38 0.00 310 reject_low 13 ALIGNMENT 0 YS2-14n20.q1k chr05 310 273 551309 551308 C 38 0.00 310 reject_low 12 ALIGNMENT 0 YS2-14n20.q1k chr16 225 62 880367 880366 C 164 0.00 310 reject_low 10 ALIGNMENT 0 YS2-14n20.q1k chr09 273 310 210707 210706 F 38 0.00 310 ambiguous_trans 0 ALIGNMENT 0 YS2-14n20.q1k vc_1 269 62 2513 2512 C 208 0.00 310 reject_low 23 ALIGNMENT 41 YS2-14n20.p1k chr02 80 34 197497 197542 C 47 97.87 286 reject_low 27 ALIGNMENT 43 YS2-14n20.p1k chr09 34 82 183465 183512 F 49 97.96 286 reject_low 14 ALIGNMENT 0 YS2-14n20.q1k chr14 273 310 602358 602357 F 38 0.00 310 reject_low 8 ALIGNMENT 46 YS2-14n20.q1k chr12 272 226 1052096 1052142 C 47 100.00 310 reject_low 6 ALIGNMENT 46 YS2-14n20.q1k chr14 272 226 569896 569942 C 47 100.00 310 reject_low 7 ALIGNMENT 0 YS2-14n20.p1k chr16 82 286 880366 880365 F 205 0.00 286 reject_low 22 ALIGNMENT 46 YS2-14n20.q1k chr04 272 226 668030 668076 C 47 100.00 310 reject_low 3 ALIGNMENT 59 YS2-14n20.p1k chr09 97 34 210645 210707 C 64 98.44 286|3,0 ambiguous_trans 1 ALIGNMENT 46 YS2-14n20.q1k chr12 226 272 734803 734849 F 47 100.00 310 reject_low 5 ALIGNMENT 0 YS2-14n20.q1k chr04 225 62 668077 668076 C 164 0.00 310 reject_low 3 ALIGNMENT 42 YS2-14n20.p1k chr05 34 81 443226 443272 F 48 97.92 286 reject_low 16 ALIGNMENT 36 YS2-14n20.q1k vc_5 307 272 1 36 C 36 100.00 310 reject_low 32 ALIGNMENT 0 YS2-14n20.q1k chr12 273 310 734849 734848 F 38 0.00 310 reject_low 5 ALIGNMENT 0 YS2-14n20.p1k chr09 83 286 183512 183511 F 204 0.00 286 reject_low 14 ALIGNMENT 0 YS2-14n20.q1k chr04 310 273 668031 668030 C 38 0.00 310 reject_low 3 ALIGNMENT 0 YS2-14n20.p1k chr12 286 82 734804 734803 C 205 0.00 286 reject_low 17 ALIGNMENT 0 YS2-14n20.p1k chr05 82 286 443272 443271 F 205 0.00 286 reject_low 16 ALIGNMENT 45 YS2-14n20.q1k chr05 272 227 551308 551353 C 46 100.00 310 reject_low 12 ALIGNMENT 0 YS2-14n20.p1k chr09 286 268 205043 205042 C 19 0.00 286 ambiguous_trans 1 ALIGNMENT 42 YS2-14n20.p1k chr16 81 34 819524 819570 C 48 97.92 286 reject_low 21 ALIGNMENT 0 YS2-14n20.p1k chr04 82 286 668076 668075 F 205 0.00 286 reject_low 15 ALIGNMENT 0 YS2-14n20.q1k chr16 62 225 819524 819523 F 164 0.00 310 reject_low 9 ALIGNMENT 45 YS2-14n20.q1k chr07 227 272 739127 739172 F 46 100.00 310 reject_low 13 ALIGNMENT 45 YS2-14n20.q1k chr02 227 272 197497 197542 F 46 100.00 310 reject_low 11 ALIGNMENT 0 YS2-14n20.q1k vc_5 271 62 37 36 C 210 0.00 310 reject_low 32 ALIGNMENT 42 YS2-14n20.p1k chr04 34 81 668030 668076 F 48 97.92 286 reject_low 15 ALIGNMENT 42 YS2-14n20.p1k chr16 34 81 880320 880366 F 48 97.92 286 reject_low 22 ALIGNMENT 0 YS2-14n20.q1k vc_5 271 62 5064 5063 C 210 0.00 310 reject_low 30 ALIGNMENT 0 YS2-14n20.q1k vc_4 62 269 5831 5830 F 208 0.00 310 reject_low 26 ALIGNMENT 0 YS2-14n20.q1k chr02 62 226 197497 197496 F 165 0.00 310 reject_low 11 ALIGNMENT 46 YS2-14n20.q1k chr16 226 272 819524 819570 F 47 100.00 310 reject_low 9 ALIGNMENT 150 YS2-14n20.p1k chr09 267 92 205042 205217 C 176 96.59 286|0,3 ambiguous_trans 1 ALIGNMENT 41 YS2-14n20.p1k chr07 80 34 739127 739172 C 47 97.87 286 reject_low 29 ALIGNMENT 0 YS2-14n20.q1k chr05 310 273 443227 443226 C 38 0.00 310 reject_low 4 ALIGNMENT 0 YS2-14n20.q1k chr05 226 62 551354 551353 C 165 0.00 310 reject_low 12 ALIGNMENT 42 YS2-14n20.p1k chr12 34 81 1052096 1052142 F 48 97.92 286 reject_low 18 ALIGNMENT 0 YS2-14n20.p1k chr07 286 81 739128 739127 C 206 0.00 286 reject_low 29 ALIGNMENT 42 YS2-14n20.p1k chr14 81 34 602312 602358 C 48 97.92 286 reject_low 20 ALIGNMENT 0 YS2-14n20.q1k chr02 273 310 197542 197541 F 38 0.00 310 reject_low 11 ALIGNMENT 0 YS2-14n20.q1k chr05 225 62 443273 443272 C 164 0.00 310 reject_low 4 ALIGNMENT 46 YS2-14n20.q1k chr05 272 226 443226 443272 C 47 100.00 310 reject_low 4 ALIGNMENT 1011 YS2-14n21.q1k chr09 1243 29 97091 98309 C 1215 95.23 1326 accept 0 ALIGNMENT 1005 YS2-14n21.p1k chr09 33 1196 96385 97562 F 1164 96.22 1355 accept 0 ALIGNMENT 1091 YS2-14n23.q1k chr05 1261 30 484078 485310 C 1232 97.00 1281 accept_chi 0 ALIGNMENT 1049 YS2-14n23.p1k chr16 1242 34 32413 33624 C 1209 96.69 1248 accept_chi 1 ALIGNMENT 36 YS2-14n24.q1k vc_5 287 252 1 36 C 36 100.00 290 reject_low 8 ALIGNMENT 0 YS2-14n24.q1k vc_2 249 62 2146 2145 C 188 0.00 290 reject_low 3 ALIGNMENT 0 YS2-14n24.q1k vc_3 249 62 2513 2512 C 188 0.00 290 reject_low 4 ALIGNMENT 0 YS2-14n24.q1k vc_4 62 249 5831 5830 F 188 0.00 290 reject_low 5 ALIGNMENT 0 YS2-14n24.q1k vc_1 249 62 2513 2512 C 188 0.00 290 reject_low 2 ALIGNMENT 41 YS2-14n24.q1k vc_3 290 250 2472 2512 C 41 100.00 290 reject_low 4 ALIGNMENT 41 YS2-14n24.q1k vc_2 290 250 2105 2145 C 41 100.00 290 reject_low 3 ALIGNMENT 0 YS2-14n24.q1k vc_5 251 47 37 2372 C 205 0.00 290 reject_low 8 ALIGNMENT 20 YS2-14n24.q1k vc_5 46 21 2373 2398 C 26 92.31 290 reject_low 8 ALIGNMENT 0 YS2-14n24.q1k vc_5 251 62 5064 5063 C 190 0.00 290 reject_low 6 ALIGNMENT 0 YS2-14n24.q1k chr12 250 290 938844 938843 F 41 0.00 290 accept_chi 0 ALIGNMENT 38 YS2-14n24.q1k vc_7 253 290 13525 13562 F 38 100.00 290 reject_low 7 ALIGNMENT 184 YS2-14n24.p1k chr12 248 40 938634 938843 C 209 96.65 266 accept_chi 1 ALIGNMENT 39 YS2-14n24.q1k vc_5 290 252 5025 5063 C 39 100.00 290 reject_low 6 ALIGNMENT 0 YS2-14n24.q1k vc_7 62 252 13525 13524 F 191 0.00 290 reject_low 7 ALIGNMENT 41 YS2-14n24.q1k vc_1 290 250 2472 2512 C 41 100.00 290 reject_low 2 ALIGNMENT 0 YS2-14n24.p1k chr12 266 249 938635 938634 C 18 0.00 266 accept_chi 1 ALIGNMENT 41 YS2-14n24.q1k vc_4 250 290 5831 5871 F 41 100.00 290 reject_low 5 ALIGNMENT 189 YS2-14n24.q1k chr12 39 249 938634 938844 F 211 97.16 290 accept_chi 0 ALIGNMENT 0 YS2-14o01.q1k vc_1 300 77 2514 2513 C 224 0.00 342 reject_low 2 ALIGNMENT 0 YS2-14o01.p1k chr06 298 315 135280 135279 F 18 0.00 315 accept_chi 1 ALIGNMENT 232 YS2-14o01.p1k chr06 26 297 135006 135280 F 272 96.32 315 accept_chi 1 ALIGNMENT 0 YS2-14o01.q1k chr06 342 303 135007 135006 C 40 0.00 342 accept_chi 0 ALIGNMENT 42 YS2-14o01.q1k vc_4 301 342 5830 5871 F 42 100.00 342 reject_low 4 ALIGNMENT 38 YS2-14o01.q1k vc_7 305 342 13525 13562 F 38 100.00 342 reject_low 6 ALIGNMENT 0 YS2-14o01.q1k vc_5 303 77 5064 5063 C 227 0.00 342 reject_low 5 ALIGNMENT 0 YS2-14o01.q1k vc_5 303 77 37 36 C 227 0.00 342 reject_low 7 ALIGNMENT 36 YS2-14o01.q1k vc_5 339 304 1 36 C 36 100.00 342 reject_low 7 ALIGNMENT 0 YS2-14o01.q1k vc_7 77 304 13525 13524 F 228 0.00 342 reject_low 6 ALIGNMENT 39 YS2-14o01.q1k vc_5 342 304 5025 5063 C 39 100.00 342 reject_low 5 ALIGNMENT 0 YS2-14o01.q1k vc_3 300 77 2514 2513 C 224 0.00 342 reject_low 3 ALIGNMENT 243 YS2-14o01.q1k chr06 302 29 135006 135278 C 274 97.81 342 accept_chi 0 ALIGNMENT 42 YS2-14o01.q1k vc_3 342 301 2472 2513 C 42 100.00 342 reject_low 3 ALIGNMENT 0 YS2-14o01.q1k vc_4 77 300 5830 5829 F 224 0.00 342 reject_low 4 ALIGNMENT 42 YS2-14o01.q1k vc_1 342 301 2472 2513 C 42 100.00 342 reject_low 2 ALIGNMENT 0 YS2-14o03.p1k chr13 983 62 239388 239387 C 922 0.00 1265 reject_low 2 ALIGNMENT 21 YS2-14o03.p1k chr04 986 1022 1385462 1385498 F 37 97.30 1265 reject_low 4 ALIGNMENT 0 YS2-14o03.p1k chr07 62 989 307183 307182 F 928 0.00 1265 reject_low 3 ALIGNMENT 22 YS2-14o03.p1k chr07 990 1022 307183 307215 F 33 100.00 1265 reject_low 3 ALIGNMENT 1030 YS2-14o03.q1k chr15 36 1271 322630 323888 F 1236 95.95 1307 accept 0 ALIGNMENT 0 YS2-14o03.p1k chr13 62 985 239354 239353 F 924 0.00 1265 reject_low 6 ALIGNMENT 0 YS2-14o03.p1k chr15 611 62 326595 326594 C 550 0.00 1265 reject_low 1 ALIGNMENT 20 YS2-14o03.p1k chr11 1022 994 136104 136132 C 29 100.00 1265 reject_low 7 ALIGNMENT 20 YS2-14o03.p1k chr13 986 1019 239354 239387 F 34 100.00 1265 reject_low 6 ALIGNMENT 934 YS2-14o03.p1k chr15 1207 35 326010 327171 C 1173 95.57 1265 accept 0 ALIGNMENT 79 YS2-14o03.p1k chr15 704 612 326502 326594 C 93 100.00 1265 reject_low 1 ALIGNMENT 20 YS2-14o03.p1k chr15 986 1020 355083 355117 F 35 100.00 1265 reject_low 5 ALIGNMENT 0 YS2-14o03.p1k chr15 929 705 326503 326502 C 225 0.00 1265 reject_low 1 ALIGNMENT 0 YS2-14o03.p1k chr04 62 985 1385462 1385461 F 924 0.00 1265 reject_low 4 ALIGNMENT 0 YS2-14o03.p1k chr11 993 62 136133 136132 C 932 0.00 1265 reject_low 7 ALIGNMENT 0 YS2-14o03.p1k chr15 62 985 355083 355082 F 924 0.00 1265 reject_low 5 ALIGNMENT 20 YS2-14o03.p1k chr13 1018 984 239353 239387 C 35 97.14 1265 reject_low 2 ALIGNMENT 0 YS2-14o04.p1k chr15 895 712 326503 326502 C 184 0.00 1269 reject_low 1 ALIGNMENT 79 YS2-14o04.p1k chr15 711 619 326502 326594 C 93 100.00 1269 reject_low 1 ALIGNMENT 1038 YS2-14o04.q1k chr15 38 1254 322630 323846 F 1217 96.06 1370 accept 0 ALIGNMENT 901 YS2-14o04.p1k chr15 1136 35 326061 327178 C 1102 96.37 1269 accept 0 ALIGNMENT 0 YS2-14o04.p1k chr15 618 62 326595 326594 C 557 0.00 1269 reject_low 1 ALIGNMENT 848 YS2-14o07.q1k chr14 37 1120 128894 129959 F 1084 94.93 1293 accept 0 ALIGNMENT 1024 YS2-14o07.p1k chr14 1238 30 131995 133215 C 1209 95.86 1288 accept 0 ALIGNMENT 0 YS2-14o08.q1k chr07 225 186 976172 976171 C 40 0.00 225 accept 0 ALIGNMENT 0 YS2-14o08.q1k vc_5 186 62 37 36 C 125 0.00 225 reject_low 7 ALIGNMENT 36 YS2-14o08.q1k vc_5 222 187 1 36 C 36 100.00 225 reject_low 7 ALIGNMENT 39 YS2-14o08.q1k vc_5 225 187 5025 5063 C 39 100.00 225 reject_low 5 ALIGNMENT 41 YS2-14o08.q1k vc_2 225 185 2105 2145 C 41 100.00 225 reject_low 2 ALIGNMENT 0 YS2-14o08.q1k vc_1 184 62 2513 2512 C 123 0.00 225 reject_low 1 ALIGNMENT 0 YS2-14o08.q1k vc_5 186 62 5064 5063 C 125 0.00 225 reject_low 5 ALIGNMENT 41 YS2-14o08.q1k vc_3 225 185 2472 2512 C 41 100.00 225 reject_low 3 ALIGNMENT 0 YS2-14o08.q1k vc_4 62 184 5831 5830 F 123 0.00 225 reject_low 4 ALIGNMENT 41 YS2-14o08.q1k vc_1 225 185 2472 2512 C 41 100.00 225 reject_low 1 ALIGNMENT 0 YS2-14o08.q1k vc_3 184 62 2513 2512 C 123 0.00 225 reject_low 3 ALIGNMENT 38 YS2-14o08.q1k vc_7 188 225 13525 13562 F 38 100.00 225 reject_low 6 ALIGNMENT 41 YS2-14o08.q1k vc_4 185 225 5831 5871 F 41 100.00 225 reject_low 4 ALIGNMENT 0 YS2-14o08.q1k vc_7 62 187 13525 13524 F 126 0.00 225 reject_low 6 ALIGNMENT 136 YS2-14o08.q1k chr07 185 49 976171 976307 C 137 100.00 225 accept 0 ALIGNMENT 0 YS2-14o08.q1k vc_2 184 62 2146 2145 C 123 0.00 225 reject_low 2 ALIGNMENT 986 YS2-14o10.p1k chr04 34 1159 337890 339034 F 1126 97.60 1241 accept 0 ALIGNMENT 1032 YS2-14o10.q1k chr04 1189 31 342616 343789 C 1159 97.58 1361 accept 0 ALIGNMENT 0 YS2-14o11.q1k vc_1 295 92 2514 2513 C 204 0.00 337 reject_low 2 ALIGNMENT 42 YS2-14o11.q1k vc_3 337 296 2472 2513 C 42 100.00 337 reject_low 3 ALIGNMENT 0 YS2-14o11.q1k vc_4 92 295 5830 5829 F 204 0.00 337 reject_low 4 ALIGNMENT 0 YS2-14o11.p1k chr10 315 297 652205 652204 C 19 0.00 315 accept_chi 1 ALIGNMENT 251 YS2-14o11.q1k chr10 33 297 652208 652471 F 265 98.49 337 accept_chi 0 ALIGNMENT 0 YS2-14o11.q1k vc_3 295 92 2514 2513 C 204 0.00 337 reject_low 3 ALIGNMENT 243 YS2-14o11.p1k chr10 296 31 652204 652471 C 266 97.37 315 accept_chi 1 ALIGNMENT 42 YS2-14o11.q1k vc_1 337 296 2472 2513 C 42 100.00 337 reject_low 2 ALIGNMENT 39 YS2-14o11.q1k vc_5 337 299 5025 5063 C 39 100.00 337 reject_low 5 ALIGNMENT 0 YS2-14o11.q1k vc_7 92 299 13525 13524 F 208 0.00 337 reject_low 6 ALIGNMENT 0 YS2-14o11.q1k chr10 298 337 652471 652470 F 40 0.00 337 accept_chi 0 ALIGNMENT 0 YS2-14o11.q1k vc_5 298 92 5064 5063 C 207 0.00 337 reject_low 5 ALIGNMENT 36 YS2-14o11.q1k vc_5 334 299 1 36 C 36 100.00 337 reject_low 7 ALIGNMENT 38 YS2-14o11.q1k vc_7 300 337 13525 13562 F 38 100.00 337 reject_low 6 ALIGNMENT 42 YS2-14o11.q1k vc_4 296 337 5830 5871 F 42 100.00 337 reject_low 4 ALIGNMENT 0 YS2-14o11.q1k vc_5 298 92 37 36 C 207 0.00 337 reject_low 7 ALIGNMENT 1015 YS2-14o12.p1k chr07 36 1229 149655 150854 F 1194 95.98 1293 accept 0 ALIGNMENT 946 YS2-14o12.q1k chr07 1127 31 150046 151158 C 1097 97.27 1380 accept 0 ALIGNMENT 1046 YS2-14o13.p1k chr07 1204 34 1056223 1057401 C 1171 97.61 1210 accept 0 ALIGNMENT 963 YS2-14o13.q1k chr07 36 1277 1055473 1056699 F 1242 94.36 1360 accept 0 ALIGNMENT 187 YS2-14o14.p1k chr15 506 995 1082390 1082880 F 490 81.22 1274 reject_low 7 ALIGNMENT 0 YS2-14o14.p1k chr03 996 1015 307844 307871 F 20 0.00 1274 reject_low 26 ALIGNMENT 1005 YS2-14o14.q1k chr15 1138 33 1085365 1086475 C 1106 97.47 1369 reject_low 7 ALIGNMENT 975 YS2-14o14.q1k chr16 33 1138 4661 5771 F 1106 96.56 1369 reject_low 12 ALIGNMENT 0 YS2-14o14.p1k chr15 474 62 12382 12381 C 413 0.00 1274 reject_low 24 ALIGNMENT 0 YS2-14o14.p1k chr07 62 915 1080277 1080276 F 854 0.00 1274 reject_low 6 ALIGNMENT 0 YS2-14o14.p1k chr07 471 62 7129 7128 C 410 0.00 1274 reject_low 19 ALIGNMENT 0 YS2-14o14.p1k chr10 471 62 9616 9615 C 410 0.00 1274 reject_low 3 ALIGNMENT 0 YS2-14o14.p1k chr13 422 505 922115 922196 F 84 0.00 1274 reject_low 29 ALIGNMENT 0 YS2-14o14.q1k chr13 62 239 3887 3886 F 178 0.00 1369 reject_low 15 ALIGNMENT 0 YS2-14o14.p1k chr06 939 62 99604 99603 C 878 0.00 1274 reject_low 27 ALIGNMENT 775 YS2-14o14.q1k chr05 33 1138 4756 5817 F 1106 92.31 1369 reject_low 13 ALIGNMENT 790 YS2-14o14.q1k chr12 240 1138 4011 4912 F 899 96.66 1369 reject_low 4 ALIGNMENT 391 YS2-14o14.p1k chr12 1266 391 13135 14008 C 876 83.90 1274 reject_low 4 ALIGNMENT 0 YS2-14o14.p1k chr11 471 62 2659 2658 C 410 0.00 1274 reject_low 23 ALIGNMENT 23 YS2-14o14.p1k chr13 391 421 922084 922114 F 31 93.55 1274 reject_low 29 ALIGNMENT 843 YS2-14o14.q1k chr12 1138 33 1065849 1066927 C 1106 93.76 1369 reject_low 11 ALIGNMENT 313 YS2-14o14.p1k chr09 472 1164 433449 434145 F 693 83.55 1274 reject_low 22 ALIGNMENT 363 YS2-14o14.p1k chr14 475 1266 781443 782228 F 792 84.47 1274 reject_low 20 ALIGNMENT 370 YS2-14o14.p1k chr07 1266 472 6342 7128 C 795 84.03 1274 reject_low 19 ALIGNMENT 24 YS2-14o14.p1k chr16 1143 1016 8108 8232 C 128 75.78 1274 reject_low 12 ALIGNMENT 391 YS2-14o14.p1k chr09 1164 472 8944 9632 C 693 86.87 1274 reject_low 2 ALIGNMENT 790 YS2-14o14.q1k chr08 240 1138 3743 4644 F 899 96.66 1369 reject_low 10 ALIGNMENT 0 YS2-14o14.q1k chr12 62 239 4011 4010 F 178 0.00 1369 reject_low 4 ALIGNMENT 0 YS2-14o14.p1k chr15 996 1015 1082881 1082908 F 20 0.00 1274 reject_low 7 ALIGNMENT 0 YS2-14o14.p1k chr04 62 839 1523120 1523119 F 778 0.00 1274 reject_low 5 ALIGNMENT 1005 YS2-14o14.q1k chr12 1138 33 1072401 1073511 C 1106 97.47 1369 reject_low 1 ALIGNMENT 0 YS2-14o14.p1k chr16 390 62 8866 8865 C 329 0.00 1274 reject_low 12 ALIGNMENT 790 YS2-14o14.q1k chr13 240 1138 3887 4788 F 899 96.66 1369 reject_low 15 ALIGNMENT 0 YS2-14o14.p1k chr09 471 62 9633 9632 C 410 0.00 1274 reject_low 2 ALIGNMENT 33 YS2-14o14.p1k chr12 940 1140 94736 94941 F 201 75.62 1274 reject_low 28 ALIGNMENT 187 YS2-14o14.p1k chr16 995 506 8261 8751 C 490 81.22 1274 reject_low 12 ALIGNMENT 784 YS2-14o14.q1k chr02 240 1138 4212 5113 F 899 96.44 1369 accept 0 ALIGNMENT 0 YS2-14o14.p1k chr12 62 939 94736 94735 F 878 0.00 1274 reject_low 28 ALIGNMENT 0 YS2-14o14.p1k chr16 1015 996 8233 8260 C 20 0.00 1274 reject_low 12 ALIGNMENT 0 YS2-14o14.q1k chr12 62 239 9546 9545 F 178 0.00 1369 reject_low 14 ALIGNMENT 0 YS2-14o14.p1k chr13 996 1015 922686 922713 F 20 0.00 1274 reject_low 29 ALIGNMENT 27 YS2-14o14.p1k chr13 1016 1143 922714 922838 F 128 76.56 1274 reject_low 29 ALIGNMENT 24 YS2-14o14.p1k chr03 1016 1143 307872 307996 F 128 75.78 1274 reject_low 26 ALIGNMENT 0 YS2-14o14.q1k chr02 62 239 4212 4211 F 178 0.00 1369 accept 0 ALIGNMENT 0 YS2-14o14.q1k chr06 62 241 3050 3049 F 180 0.00 1369 reject_low 18 ALIGNMENT 119 YS2-14o14.p1k chr04 840 1164 1523120 1523443 F 325 81.54 1274 reject_low 5 ALIGNMENT 0 YS2-14o14.p1k chr08 505 62 12735 12734 C 444 0.00 1274 reject_low 10 ALIGNMENT 402 YS2-14o14.p1k chr12 506 1266 1062475 1063226 F 761 86.20 1274 reject_low 1 ALIGNMENT 98 YS2-14o14.p1k chr07 916 1164 1080277 1080523 F 249 82.33 1274 reject_low 6 ALIGNMENT 981 YS2-14o14.q1k chr09 33 1138 5141 6251 F 1106 96.75 1369 reject_low 2 ALIGNMENT 0 YS2-14o14.p1k chr09 62 471 433449 433448 F 410 0.00 1274 reject_low 22 ALIGNMENT 314 YS2-14o14.p1k chr03 506 995 307351 307843 F 490 89.59 1274 reject_low 26 ALIGNMENT 218 YS2-14o14.p1k chr15 1266 475 11600 12381 C 792 78.54 1274 reject_low 24 ALIGNMENT 790 YS2-14o14.q1k chr12 240 1138 9546 10447 F 899 96.66 1369 reject_low 14 ALIGNMENT 0 YS2-14o14.q1k chr16 239 62 944167 944166 C 178 0.00 1369 reject_low 16 ALIGNMENT 24 YS2-14o14.p1k chr15 1016 1113 1082909 1083004 F 98 77.55 1274 reject_low 7 ALIGNMENT 35 YS2-14o14.p1k chr06 1150 940 99390 99603 C 211 75.36 1274 reject_low 27 ALIGNMENT 0 YS2-14o14.p1k chr16 505 422 8752 8834 C 84 0.00 1274 reject_low 12 ALIGNMENT 975 YS2-14o14.q1k chr07 1138 33 1085106 1086216 C 1106 96.56 1369 reject_low 6 ALIGNMENT 784 YS2-14o14.q1k chr06 242 1138 3050 3950 F 897 96.54 1369 reject_low 18 ALIGNMENT 0 YS2-14o14.p1k chr15 422 505 1082307 1082389 F 84 0.00 1274 reject_low 7 ALIGNMENT 0 YS2-14o14.p1k chr12 390 62 14009 14008 C 329 0.00 1274 reject_low 4 ALIGNMENT 307 YS2-14o14.p1k chr11 1164 472 1962 2658 C 693 83.26 1274 reject_low 23 ALIGNMENT 898 YS2-14o14.p1k chr02 1266 38 7657 8882 C 1229 92.60 1274 accept 0 ALIGNMENT 975 YS2-14o14.q1k chr14 33 1138 4752 5862 F 1106 96.56 1369 reject_low 8 ALIGNMENT 293 YS2-14o14.p1k chr08 1266 506 11973 12734 C 761 82.13 1274 reject_low 10 ALIGNMENT 1005 YS2-14o14.q1k chr04 1138 33 1526200 1527310 C 1106 97.47 1369 reject_low 5 ALIGNMENT 165 YS2-14o14.p1k chr13 506 995 922197 922685 F 490 80.00 1274 reject_low 29 ALIGNMENT 0 YS2-14o14.q1k chr08 239 62 558620 558619 C 178 0.00 1369 reject_low 17 ALIGNMENT 95 YS2-14o14.p1k chr02 916 1164 809016 809262 F 249 81.93 1274 reject_low 25 ALIGNMENT 0 YS2-14o14.p1k chr02 62 915 809016 809015 F 854 0.00 1274 reject_low 25 ALIGNMENT 391 YS2-14o14.p1k chr10 1164 472 8927 9615 C 693 86.87 1274 reject_low 3 ALIGNMENT 0 YS2-14o14.p1k chr14 62 474 781443 781442 F 413 0.00 1274 reject_low 20 ALIGNMENT 0 YS2-14o14.q1k chr08 62 239 3743 3742 F 178 0.00 1369 reject_low 10 ALIGNMENT 0 YS2-14o14.p1k chr03 62 505 307351 307350 F 444 0.00 1274 reject_low 26 ALIGNMENT 789 YS2-14o14.q1k chr16 1138 240 943264 944166 C 899 96.66 1369 reject_low 16 ALIGNMENT 902 YS2-14o14.q1k chr05 1138 33 571046 572139 C 1106 95.03 1369 reject_low 9 ALIGNMENT 0 YS2-14o14.p1k chr13 62 390 922084 922083 F 329 0.00 1274 reject_low 29 ALIGNMENT 324 YS2-14o14.p1k chr01 1266 506 1859 2609 C 761 83.18 1274 reject_low 21 ALIGNMENT 0 YS2-14o14.p1k chr01 505 62 2610 2609 C 444 0.00 1274 reject_low 21 ALIGNMENT 788 YS2-14o14.q1k chr08 1138 240 557719 558619 C 899 96.66 1369 reject_low 17 ALIGNMENT 23 YS2-14o14.p1k chr16 421 391 8835 8865 C 31 93.55 1274 reject_low 12 ALIGNMENT 0 YS2-14o14.p1k chr12 62 505 1062475 1062474 F 444 0.00 1274 reject_low 1 ALIGNMENT 23 YS2-14o14.p1k chr15 391 421 1082276 1082306 F 31 93.55 1274 reject_low 7 ALIGNMENT 0 YS2-14o14.p1k chr15 62 390 1082276 1082275 F 329 0.00 1274 reject_low 7 ALIGNMENT 981 YS2-14o14.q1k chr10 33 1138 5124 6234 F 1106 96.75 1369 reject_low 3 ALIGNMENT 943 YS2-14o15.q1k chr16 1147 40 13254 14383 C 1108 96.48 1290 reject_low 1 ALIGNMENT 959 YS2-14o15.q1k chr15 40 1217 1076752 1077963 F 1178 95.59 1290 accept_tel 0 ALIGNMENT 1025 YS2-14o15.p1k chr13 1198 29 919753 920926 C 1170 95.90 1332 reject_low 2 ALIGNMENT 1043 YS2-14o15.p1k chr15 1274 29 1079857 1081112 C 1246 94.78 1332 accept_tel 0 ALIGNMENT 1042 YS2-14o15.p1k chr16 29 1218 10030 11224 F 1190 95.88 1332 reject_low 1 ALIGNMENT 0 YS2-14o17.q1k chr05 1106 62 309028 309027 C 1045 0.00 1343 reject_low 2 ALIGNMENT 977 YS2-14o17.p1k chr15 34 1175 60100 61247 F 1142 96.94 1222 accept 0 ALIGNMENT 0 YS2-14o17.q1k chr07 1088 62 530063 530062 C 1027 0.00 1343 reject_low 1 ALIGNMENT 25 YS2-14o17.q1k chr05 1134 1107 309000 309027 C 28 100.00 1343 reject_low 2 ALIGNMENT 27 YS2-14o17.q1k chr07 1133 1089 530018 530062 C 45 93.33 1343 reject_low 1 ALIGNMENT 1040 YS2-14o17.q1k chr15 1254 47 62927 64141 C 1208 96.44 1343 accept 0 ALIGNMENT 1014 YS2-14o18.p1k chr13 36 1290 441844 443092 F 1255 94.66 1300 accept 0 ALIGNMENT 948 YS2-14o18.q1k chr05 1145 53 8061 9154 C 1093 96.61 1379 ambiguous_tel 1 ALIGNMENT 949 YS2-14o20.q1k chr12 1193 41 950507 951680 C 1153 95.58 1330 accept 0 ALIGNMENT 1053 YS2-14o20.p1k chr12 39 1210 939291 940455 F 1172 97.95 1218 accept 0 ALIGNMENT 370 YS2-14o21.p1k chr05 606 113 52725 53218 C 494 91.90 1210 reject_low 1 ALIGNMENT 1047 YS2-14o21.p1k chr04 40 1210 1301533 1302702 F 1171 97.52 1210 accept 0 ALIGNMENT 0 YS2-14o21.p1k chr05 910 607 52726 52725 C 304 0.00 1210 reject_low 1 ALIGNMENT 1025 YS2-14o21.q1k chr04 1223 36 1304252 1305439 C 1188 96.55 1281 accept 0 ALIGNMENT 0 YS2-14o21.p1k chr05 112 62 53219 53218 C 51 0.00 1210 reject_low 1 ALIGNMENT 935 YS2-14o22.q1k chr02 1171 37 121572 122705 C 1135 96.48 1325 accept 0 ALIGNMENT 1028 YS2-14o22.p1k chr02 30 1216 117454 118655 F 1187 96.29 1237 accept 0 ALIGNMENT 0 YS2-14o24.q1k chr12 109 219 489348 489347 F 111 0.00 1302 reject_low 6 ALIGNMENT 0 YS2-14o24.q1k chr12 109 219 482044 482043 F 111 0.00 1302 reject_low 4 ALIGNMENT 385 YS2-14o24.q1k chr12 151 559 459606 460016 F 409 99.02 1302 reject_low 2 ALIGNMENT 110 YS2-14o24.p1k chr12 817 699 482044 482162 C 119 97.48 1260 reject_low 5 ALIGNMENT 0 YS2-14o24.q1k chr12 560 740 460016 460015 F 181 0.00 1302 reject_low 2 ALIGNMENT 119 YS2-14o24.q1k chr12 220 338 485696 485814 F 119 100.00 1302 reject_low 8 ALIGNMENT 0 YS2-14o24.p1k chr12 698 62 472583 472582 C 637 0.00 1260 reject_low 3 ALIGNMENT 110 YS2-14o24.p1k chr12 817 699 472464 472582 C 119 97.48 1260 reject_low 3 ALIGNMENT 116 YS2-14o24.p1k chr12 817 693 489348 489472 C 125 97.60 1260 reject_low 4 ALIGNMENT 791 YS2-14o24.p1k chr12 993 31 459502 460466 C 963 95.64 1260 accept 0 ALIGNMENT 267 YS2-14o24.q1k chr12 48 338 468639 468930 F 291 97.94 1302 reject_low 3 ALIGNMENT 110 YS2-14o24.p1k chr12 817 699 485696 485814 C 119 97.48 1260 reject_low 7 ALIGNMENT 0 YS2-14o24.q1k chr12 354 740 489481 489480 F 387 0.00 1302 reject_low 6 ALIGNMENT 0 YS2-14o24.q1k chr12 109 219 472464 472463 F 111 0.00 1302 reject_low 5 ALIGNMENT 119 YS2-14o24.q1k chr12 220 338 472464 472582 F 119 100.00 1302 reject_low 5 ALIGNMENT 185 YS2-14o24.p1k chr12 993 699 468639 468930 C 295 88.47 1260 reject_low 1,2 ALIGNMENT 0 YS2-14o24.q1k chr12 109 150 459606 459605 F 42 0.00 1302 reject_low 2 ALIGNMENT 0 YS2-14o24.q1k chr12 339 740 482162 482161 F 402 0.00 1302 reject_low 4 ALIGNMENT 0 YS2-14o24.q1k chr12 339 740 468930 468929 F 402 0.00 1302 reject_low 3 ALIGNMENT 128 YS2-14o24.q1k chr12 220 353 489348 489481 F 134 98.51 1302 reject_low 6 ALIGNMENT 0 YS2-14o24.q1k chr12 109 219 485696 485695 F 111 0.00 1302 reject_low 8 ALIGNMENT 0 YS2-14o24.q1k chr12 339 740 485814 485813 F 402 0.00 1302 reject_low 8 ALIGNMENT 0 YS2-14o24.p1k chr12 698 62 468931 468930 C 637 0.00 1260 reject_low 1,2 ALIGNMENT 0 YS2-14o24.p1k chr12 698 62 485815 485814 C 637 0.00 1260 reject_low 7 ALIGNMENT 0 YS2-14o24.p1k chr12 698 62 482163 482162 C 637 0.00 1260 reject_low 5 ALIGNMENT 0 YS2-14o24.q1k chr12 339 740 472582 472581 F 402 0.00 1302 reject_low 5 ALIGNMENT 119 YS2-14o24.q1k chr12 220 338 482044 482162 F 119 100.00 1302 reject_low 4 ALIGNMENT 799 YS2-14o24.q1k chr12 48 1001 459502 460463 F 954 96.33 1302 reject_low 1 ALIGNMENT 0 YS2-14o24.p1k chr12 692 62 489473 489472 C 631 0.00 1260 reject_low 4 ALIGNMENT 976 YS2-14p01.p1k chr10 1169 34 296598 297740 C 1136 96.21 1251 accept 0 ALIGNMENT 1024 YS2-14p01.q1k chr10 40 1281 295804 297029 F 1242 95.49 1349 accept 0 ALIGNMENT 0 YS2-14p04.q1k chr12 850 62 523273 523272 C 789 0.00 1321 reject_low 1 ALIGNMENT 0 YS2-14p04.p1k chr12 882 912 523272 523271 F 31 0.00 1324 reject_low 1 ALIGNMENT 1021 YS2-14p04.q1k chr04 39 1199 1449394 1450567 F 1161 97.16 1321 accept 0 ALIGNMENT 1020 YS2-14p04.p1k chr04 1237 30 1449851 1451057 C 1208 96.03 1324 accept 0 ALIGNMENT 0 YS2-14p04.p1k chr12 62 623 523015 523014 F 562 0.00 1324 reject_low 1 ALIGNMENT 147 YS2-14p04.q1k chr12 1096 851 523021 523272 C 246 86.99 1321 reject_low 1 ALIGNMENT 188 YS2-14p04.p1k chr12 624 881 523015 523272 F 258 91.09 1324 reject_low 1 ALIGNMENT 0 YS2-14p05.p1k vc_6 62 1110 3585 3584 F 1049 0.00 1313 reject_low 13 ALIGNMENT 0 YS2-14p05.q1k vc_7 62 856 13525 13524 F 795 0.00 1316 reject_low 20 ALIGNMENT 119 YS2-14p05.q1k vc_2 894 1089 2164 2375 F 196 89.29 1316 reject_low 9 ALIGNMENT 0 YS2-14p05.p1k vc_7 62 885 100 99 F 824 0.00 1313 reject_low 2 ALIGNMENT 749 YS2-14p05.q1k chr08 26 853 153674 154503 F 828 98.67 1316 accept 0 ALIGNMENT 0 YS2-14p05.q1k vc_4 895 894 5872 6353 F 0 0.00 1316 reject_low 14 ALIGNMENT 0 YS2-14p05.q1k vc_7 893 62 2728 2727 C 832 0.00 1316 reject_low 2 ALIGNMENT 0 YS2-14p05.q1k vc_4 62 893 126 125 F 832 0.00 1316 reject_low 12 ALIGNMENT 41 YS2-14p05.q1k vc_4 854 894 5831 5871 F 41 100.00 1316 reject_low 14 ALIGNMENT 0 YS2-14p05.q1k vc_1 853 62 2513 2512 C 792 0.00 1316 reject_low 16 ALIGNMENT 36 YS2-14p05.q1k vc_5 891 856 1 36 C 36 100.00 1316 reject_low 21 ALIGNMENT 0 YS2-14p05.q1k vc_2 853 62 2146 2145 C 792 0.00 1316 reject_low 17 ALIGNMENT 26 YS2-14p05.p1k vc_1 916 886 2441 2472 C 31 96.77 1313 reject_low 22 ALIGNMENT 0 YS2-14p05.p1k vc_1 885 62 2473 2472 C 824 0.00 1313 reject_low 22 ALIGNMENT 283 YS2-14p05.p1k vc_7 886 1313 13562 13993 F 428 89.25 1313 reject_low 6 ALIGNMENT 0 YS2-14p05.q1k vc_5 855 62 5064 5063 C 794 0.00 1316 reject_low 19 ALIGNMENT 0 YS2-14p05.p1k vc_4 62 885 5871 5870 F 824 0.00 1313 reject_low 7 ALIGNMENT 0 YS2-14p05.q1k vc_3 853 62 2513 2512 C 792 0.00 1316 reject_low 18 ALIGNMENT 0 YS2-14p05.q1k vc_5 855 62 37 36 C 794 0.00 1316 reject_low 21 ALIGNMENT 119 YS2-14p05.q1k vc_4 1089 894 5601 5812 C 196 89.29 1316 reject_low 11 ALIGNMENT 0 YS2-14p05.p1k vc_2 885 62 2106 2105 C 824 0.00 1313 reject_low 4 ALIGNMENT 0 YS2-14p05.p1k vc_7 62 885 13562 13561 F 824 0.00 1313 reject_low 6 ALIGNMENT 283 YS2-14p05.p1k vc_1 1313 886 1674 2105 C 428 89.25 1313 reject_low 3 ALIGNMENT 0 YS2-14p05.p1k vc_3 885 62 2473 2472 C 824 0.00 1313 reject_low 23 ALIGNMENT 38 YS2-14p05.q1k vc_7 857 894 13525 13562 F 38 100.00 1316 reject_low 20 ALIGNMENT 41 YS2-14p05.q1k vc_3 894 854 2472 2512 C 41 100.00 1316 reject_low 18 ALIGNMENT 119 YS2-14p05.q1k vc_5 894 1089 2398 2609 F 196 89.29 1316 reject_low 1 ALIGNMENT 748 YS2-14p05.p1k chr08 867 44 153677 154499 C 824 98.79 1313 accept 0 ALIGNMENT 0 YS2-14p05.q1k vc_4 893 62 1535 1534 C 832 0.00 1316 reject_low 15 ALIGNMENT 0 YS2-14p05.q1k vc_4 893 62 5813 5812 C 832 0.00 1316 reject_low 11 ALIGNMENT 283 YS2-14p05.p1k vc_2 1313 886 1674 2105 C 428 89.25 1313 reject_low 4 ALIGNMENT 0 YS2-14p05.p1k vc_1 885 62 2106 2105 C 824 0.00 1313 reject_low 3 ALIGNMENT 39 YS2-14p05.q1k vc_5 894 856 5025 5063 C 39 100.00 1316 reject_low 19 ALIGNMENT 41 YS2-14p05.q1k vc_1 894 854 2472 2512 C 41 100.00 1316 reject_low 16 ALIGNMENT 283 YS2-14p05.p1k vc_7 886 1313 100 531 F 428 89.25 1313 reject_low 2 ALIGNMENT 41 YS2-14p05.q1k vc_2 894 854 2105 2145 C 41 100.00 1316 reject_low 17 ALIGNMENT 0 YS2-14p05.q1k vc_2 62 893 2164 2163 F 832 0.00 1316 reject_low 9 ALIGNMENT 119 YS2-14p05.q1k vc_7 1089 894 2516 2727 C 196 89.29 1316 reject_low 2 ALIGNMENT 101 YS2-14p05.q1k vc_4 894 1034 126 275 F 141 92.20 1316 reject_low 12 ALIGNMENT 26 YS2-14p05.p1k vc_3 916 886 2441 2472 C 31 96.77 1313 reject_low 23 ALIGNMENT 0 YS2-14p05.q1k vc_4 62 853 5831 5830 F 792 0.00 1316 reject_low 14 ALIGNMENT 119 YS2-14p05.q1k vc_3 894 1089 2531 2742 F 196 89.29 1316 reject_low 10 ALIGNMENT 253 YS2-14p05.p1k vc_4 886 1232 5871 6224 F 347 91.07 1313 reject_low 7 ALIGNMENT 0 YS2-14p05.q1k vc_1 62 893 2531 2530 F 832 0.00 1316 reject_low 8 ALIGNMENT 283 YS2-14p05.p1k vc_3 1313 886 1674 2105 C 428 89.25 1313 reject_low 5 ALIGNMENT 74 YS2-14p05.q1k vc_4 976 894 1450 1534 C 83 97.59 1316 reject_low 15 ALIGNMENT 101 YS2-14p05.q1k vc_4 894 1034 6353 6502 F 141 92.20 1316|1,0 reject_low 14 ALIGNMENT 119 YS2-14p05.q1k vc_1 894 1089 2531 2742 F 196 89.29 1316 reject_low 8 ALIGNMENT 0 YS2-14p05.p1k vc_5 885 62 5026 5025 C 824 0.00 1313 reject_low 1 ALIGNMENT 0 YS2-14p05.q1k vc_5 62 893 2398 2397 F 832 0.00 1316 reject_low 1 ALIGNMENT 283 YS2-14p05.p1k vc_5 1313 886 4594 5025 C 428 89.25 1313 reject_low 1 ALIGNMENT 0 YS2-14p05.q1k vc_3 62 893 2531 2530 F 832 0.00 1316 reject_low 10 ALIGNMENT 97 YS2-14p05.p1k vc_6 1111 1313 3585 3787 F 203 84.24 1313 reject_low 13 ALIGNMENT 0 YS2-14p05.p1k vc_3 885 62 2106 2105 C 824 0.00 1313 reject_low 5 ALIGNMENT 1052 YS2-14p06.p1k chr10 34 1292 687170 688430 F 1259 95.87 1330 accept 0 ALIGNMENT 1056 YS2-14p06.q1k chr10 1240 42 690697 691898 C 1199 97.00 1372 accept 0 ALIGNMENT 0 YS2-14p07.p1k chrm 62 89 34138 34137 F 28 0.00 1324 reject_low 7,8,10 ALIGNMENT 0 YS2-14p07.p1k chrm 162 62 6155 6154 C 101 0.00 1324 reject_low 5 ALIGNMENT 27 YS2-14p07.p1k chrm 90 160 34138 34210 F 71 81.69 1324|0,8 reject_low 7,8,10 ALIGNMENT 0 YS2-14p07.p1k chrm 333 887 55635 55634 F 555 0.00 1324 reject_low 4 ALIGNMENT 0 YS2-14p07.p1k chrm 182 887 35171 35170 F 706 0.00 1324 reject_low 8 ALIGNMENT 355 YS2-14p07.p1k chrm 235 1152 77931 78819 F 918 90.41 1324 reject_bad_break 1 ALIGNMENT 0 YS2-14p07.p1k chrm 887 825 72792 72791 C 63 0.00 1324 reject_low 2 ALIGNMENT 23 YS2-14p07.p1k chrm 293 184 33136 33242 C 110 80.00 1324 reject_low 6 ALIGNMENT 0 YS2-14p07.p1k chrm 202 887 35150 35149 F 686 0.00 1324 reject_low 10 ALIGNMENT 40 YS2-14p07.p1k chrm 300 184 68548 68666 C 117 82.91 1324 reject_low 9 ALIGNMENT 47 YS2-14p07.p1k chrm 184 280 34193 34286 F 97 85.57 1324 reject_low 7 ALIGNMENT 36 YS2-14p07.p1k chrm 824 761 65066 65126 C 64 89.06 1324 reject_low 9 ALIGNMENT 0 YS2-14p07.p1k chrm 771 62 72842 72841 C 710 0.00 1324 reject_low 2 ALIGNMENT 27 YS2-14p07.p1k chrm 177 332 55488 55635 F 156 81.41 1324 reject_low 4 ALIGNMENT 0 YS2-14p07.p1k chrm 161 162 34211 35111 F 2 0.00 1324 reject_low 10 ALIGNMENT 971 YS2-14p07.q1k chr01 40 1263 97826 99064 F 1224 94.53 1355 accept_chi 0 ALIGNMENT 0 YS2-14p07.p1k chrm 887 825 65067 65066 C 63 0.00 1324 reject_low 9 ALIGNMENT 32 YS2-14p07.p1k chrm 163 201 35112 35150 F 39 94.87 1324 reject_low 10 ALIGNMENT 0 YS2-14p07.p1k chrm 161 183 34211 34192 F 23 0.00 1324 reject_low 7 ALIGNMENT 0 YS2-14p07.p1k chrm 825 887 55463 55462 F 63 0.00 1324 reject_low 3 ALIGNMENT 39 YS2-14p07.p1k chrm 780 824 55419 55463 F 45 97.78 1324 reject_low 3 ALIGNMENT 29 YS2-14p07.p1k chrm 144 181 35134 35171 F 38 92.11 1324|9,0 reject_low 8 ALIGNMENT 38 YS2-14p07.p1k chrm 824 772 72791 72841 C 53 94.34 1324 reject_low 2 ALIGNMENT 0 YS2-14p07.p1k chrm 192 234 77939 77930 F 43 0.00 1324 reject_bad_break 1 ALIGNMENT 24 YS2-14p07.p1k chrm 190 163 6127 6154 C 28 96.43 1324 reject_low 5 ALIGNMENT 95 YS2-14p07.p1k chrm 33 191 77764 77938 F 159 88.68 1324 reject_bad_break 1 ALIGNMENT 0 YS2-14p07.p1k chrm 62 779 55419 55418 F 718 0.00 1324 reject_low 3 ALIGNMENT 0 YS2-14p07.p1k chrm 281 887 34286 34285 F 607 0.00 1324 reject_low 7 ALIGNMENT 0 YS2-14p07.p1k chrm 887 191 6128 6127 C 697 0.00 1324 reject_low 5 ALIGNMENT 0 YS2-14p07.p1k chrm 183 62 68667 68666 C 122 0.00 1324 reject_low 9 ALIGNMENT 0 YS2-14p07.p1k chrm 153 152 34203 35142 F 0 0.00 1324 reject_low 8 ALIGNMENT 0 YS2-14p07.p1k chrm 62 176 55488 55487 F 115 0.00 1324 reject_low 4 ALIGNMENT 0 YS2-14p07.p1k chrm 183 62 33243 33242 C 122 0.00 1324 reject_low 6 ALIGNMENT 0 YS2-14p07.p1k chrm 887 294 33137 33136 C 594 0.00 1324 reject_low 6 ALIGNMENT 0 YS2-14p07.p1k chrm 760 301 65127 68547 C 460 0.00 1324 reject_low 9 ALIGNMENT 0 YS2-14p09.q1k vc_5 181 62 5064 5063 C 120 0.00 220 reject_low 12 ALIGNMENT 134 YS2-14p09.q1k vc_4 179 39 2903 3043 C 141 99.29 220 reject_vc 3 ALIGNMENT 0 YS2-14p09.q1k vc_7 62 182 13525 13524 F 121 0.00 220 reject_low 14 ALIGNMENT 0 YS2-14p09.q1k vc_2 220 180 968 967 C 41 0.00 220 reject_vc 1 ALIGNMENT 0 YS2-14p09.q1k vc_6 152 220 4466 4465 F 69 0.00 220 reject_low 9 ALIGNMENT 0 YS2-14p09.q1k vc_4 62 178 5830 5829 F 117 0.00 220 reject_low 11 ALIGNMENT 39 YS2-14p09.q1k vc_5 220 182 5025 5063 C 39 100.00 220 reject_low 12 ALIGNMENT 134 YS2-14p09.q1k vc_2 179 39 967 1107 C 141 99.29 220 reject_vc 1 ALIGNMENT 42 YS2-14p09.q1k vc_1 220 179 2472 2513 C 42 100.00 220|0,1 reject_vc 5 ALIGNMENT 109 YS2-14p09.q1k vc_6 39 151 4354 4466 F 113 99.12 220 reject_low 9 ALIGNMENT 0 YS2-14p09.q1k vc_2 179 180 2146 8573 C 0 0.00 220 reject_vc 6 ALIGNMENT 42 YS2-14p09.q1k vc_2 220 179 2105 2146 C 42 100.00 220|0,1 reject_vc 6 ALIGNMENT 0 YS2-14p09.q1k vc_5 181 180 37 3886 C 2 0.00 220 reject_low 8 ALIGNMENT 134 YS2-14p09.q1k vc_7 39 179 1098 1238 F 141 99.29 220 reject_vc 4 ALIGNMENT 99 YS2-14p09.q1k vc_7 39 141 14560 14662 F 103 99.03 220 reject_low 10 ALIGNMENT 0 YS2-14p09.q1k vc_3 220 180 968 967 C 41 0.00 220 reject_vc 2 ALIGNMENT 38 YS2-14p09.q1k vc_7 183 220 63 100 F 38 100.00 220 reject_low 13 ALIGNMENT 36 YS2-14p09.q1k vc_5 217 182 1 36 C 36 100.00 220 reject_low 8 ALIGNMENT 134 YS2-14p09.q1k vc_5 179 39 3887 4027 C 141 99.29 220 reject_low 8 ALIGNMENT 134 YS2-14p09.q1k vc_1 179 39 967 1107 C 141 99.29 220 reject_vc 0 ALIGNMENT 0 YS2-14p09.q1k vc_7 62 182 63 62 F 121 0.00 220 reject_low 13 ALIGNMENT 134 YS2-14p09.q1k vc_2 179 39 8574 8714 C 141 99.29 220 reject_vc 6 ALIGNMENT 134 YS2-14p09.q1k vc_3 179 39 967 1107 C 141 99.29 220 reject_vc 2 ALIGNMENT 0 YS2-14p09.q1k vc_7 180 220 1238 1237 F 41 0.00 220 reject_vc 4 ALIGNMENT 0 YS2-14p09.q1k vc_3 179 180 2513 8211 C 0 0.00 220 reject_vc 7 ALIGNMENT 0 YS2-14p09.q1k vc_4 220 180 2904 2903 C 41 0.00 220 reject_vc 3 ALIGNMENT 38 YS2-14p09.q1k vc_7 183 220 13525 13562 F 38 100.00 220 reject_low 14 ALIGNMENT 42 YS2-14p09.q1k vc_4 179 220 5830 5871 F 42 100.00 220 reject_low 11 ALIGNMENT 134 YS2-14p09.q1k vc_3 179 39 8212 8352 C 141 99.29 220 reject_vc 7 ALIGNMENT 42 YS2-14p09.q1k vc_3 220 179 2472 2513 C 42 100.00 220|0,1 reject_vc 7 ALIGNMENT 0 YS2-14p09.q1k vc_7 142 220 14662 14661 F 79 0.00 220 reject_low 10 ALIGNMENT 0 YS2-14p09.q1k vc_1 220 180 968 967 C 41 0.00 220 reject_vc 0 ALIGNMENT 134 YS2-14p09.q1k vc_1 179 39 8941 9081 C 141 99.29 220 reject_vc 5 ALIGNMENT 0 YS2-14p09.q1k vc_1 179 180 2513 8940 C 0 0.00 220 reject_vc 5 ALIGNMENT 1037 YS2-14p10.q1k chr05 1295 27 401239 402514 C 1269 94.64 1385 accept 0 ALIGNMENT 1065 YS2-14p10.p1k chr05 33 1276 400704 401950 F 1244 95.18 1278 accept 0 ALIGNMENT 0 YS2-14p11.q1k chr08 848 881 521557 521556 F 34 0.00 1347 accept 0 ALIGNMENT 77 YS2-14p11.q1k chr08 55 847 520765 521557 F 793 70.87 1347 accept 0 ALIGNMENT 0 YS2-14p12.q1k chr16 255 780 185439 185438 F 526 0.00 1343 reject_low 3 ALIGNMENT 0 YS2-14p12.q1k chr13 62 188 588600 588599 F 127 0.00 1343 reject_low 2 ALIGNMENT 966 YS2-14p12.p1k chr11 1102 34 340110 341192 C 1069 97.66 1254 accept 0 ALIGNMENT 919 YS2-14p12.q1k chr11 31 1229 336952 338173 F 1199 94.50 1343 accept 0 ALIGNMENT 29 YS2-14p12.q1k chr04 227 170 654336 654393 C 58 89.66 1343 reject_low 1 ALIGNMENT 0 YS2-14p12.q1k chr04 780 228 654337 654336 C 553 0.00 1343 reject_low 1 ALIGNMENT 22 YS2-14p12.q1k chr16 186 254 185371 185439 F 69 88.41 1343 reject_low 3 ALIGNMENT 0 YS2-14p12.q1k chr16 62 185 185371 185370 F 124 0.00 1343 reject_low 3 ALIGNMENT 0 YS2-14p12.q1k chr04 169 62 654394 654393 C 108 0.00 1343 reject_low 1 ALIGNMENT 20 YS2-14p12.q1k chr13 189 277 588600 588688 F 89 85.39 1343 reject_low 2 ALIGNMENT 0 YS2-14p12.q1k chr13 278 780 588688 588687 F 503 0.00 1343 reject_low 2 ALIGNMENT 0 YS2-14p13.p1k chrm 205 187 54805 54804 C 19 0.00 205 accept 0 ALIGNMENT 104 YS2-14p13.p1k chrm 186 40 54804 54949 C 147 97.96 205 accept 0 ALIGNMENT 1015 YS2-14p14.q1k chr15 1199 31 655928 657113 C 1169 96.49 1328 accept 0 ALIGNMENT 1050 YS2-14p14.p1k chr15 35 1248 652582 653800 F 1214 96.71 1249 accept 0 ALIGNMENT 954 YS2-14p16.p1k chr11 1146 35 324736 325849 C 1112 96.76 1336 accept 0 ALIGNMENT 952 YS2-14p16.q1k chr11 50 1120 324046 325129 F 1071 97.76 1340 accept 0 ALIGNMENT 0 YS2-14p20.q1k vc_4 1171 62 5812 5811 C 1110 0.00 1360 reject_low 6 ALIGNMENT 37 YS2-14p20.q1k vc_4 1172 1227 6354 6410 F 56 91.07 1360 reject_low 7 ALIGNMENT 37 YS2-14p20.q1k vc_5 1172 1227 2399 2455 F 56 91.07 1360 reject_low 8 ALIGNMENT 0 YS2-14p20.q1k vc_5 62 1171 2399 2398 F 1110 0.00 1360 reject_low 8 ALIGNMENT 37 YS2-14p20.q1k vc_3 1172 1227 2532 2588 F 56 91.07 1360 reject_low 3 ALIGNMENT 37 YS2-14p20.q1k vc_4 1172 1227 127 183 F 56 91.07 1360 reject_low 4 ALIGNMENT 1004 YS2-14p20.p1k chr13 1115 38 546970 548050 C 1078 98.89 1188 accept_chi 0 ALIGNMENT 37 YS2-14p20.q1k vc_4 1227 1172 1477 1533 C 56 89.29 1360 reject_low 5 ALIGNMENT 37 YS2-14p20.q1k vc_1 1172 1227 2532 2588 F 56 91.07 1360 reject_low 2 ALIGNMENT 0 YS2-14p20.q1k vc_3 62 1171 2532 2531 F 1110 0.00 1360 reject_low 3 ALIGNMENT 0 YS2-14p20.q1k vc_4 62 1171 127 126 F 1110 0.00 1360 reject_low 4 ALIGNMENT 0 YS2-14p20.q1k vc_4 1171 62 1534 1533 C 1110 0.00 1360 reject_low 5 ALIGNMENT 0 YS2-14p20.q1k vc_4 62 1171 6354 6353 F 1110 0.00 1360 reject_low 7 ALIGNMENT 0 YS2-14p20.q1k vc_1 62 1171 2532 2531 F 1110 0.00 1360 reject_low 2 ALIGNMENT 991 YS2-14p20.q1k chr13 48 1128 546970 548051 F 1081 98.70 1360 accept_chi 1 ALIGNMENT 37 YS2-14p20.q1k vc_4 1227 1172 5755 5811 C 56 89.29 1360 reject_low 6 ALIGNMENT 965 YS2-14p21.q1k chr10 33 1163 488786 489928 F 1131 96.11 1271 accept 0 ALIGNMENT 955 YS2-14p21.p1k chr10 1161 44 492054 493180 C 1118 95.89 1232 accept 0 ALIGNMENT 1028 YS2-14p22.p1k chr09 29 1232 43949 45167 F 1204 95.93 1239 accept 0 ALIGNMENT 880 YS2-14p22.q1k chr09 1142 34 44708 45837 C 1109 96.12 1255 accept 0 ALIGNMENT 0 YS2-14p23.q1k vc_3 888 806 2473 2472 C 83 0.00 1281 reject_low 14 ALIGNMENT 0 YS2-14p23.q1k vc_1 765 62 2512 2511 C 704 0.00 1281 reject_low 12 ALIGNMENT 36 YS2-14p23.q1k vc_5 802 767 1 36 C 36 100.00 1281 reject_low 18 ALIGNMENT 0 YS2-14p23.q1k vc_1 62 804 2531 2530 F 743 0.00 1281 reject_low 2 ALIGNMENT 0 YS2-14p23.q1k vc_5 62 804 2398 2397 F 743 0.00 1281 reject_low 5 ALIGNMENT 153 YS2-14p23.q1k vc_4 805 966 126 287 F 162 98.77 1281 reject_low 8 ALIGNMENT 0 YS2-14p23.q1k vc_4 804 62 1535 1534 C 743 0.00 1281 reject_low 11 ALIGNMENT 0 YS2-14p23.q1k vc_7 1015 1016 5172 6360 C 0 0.00 1281 reject_low 10 ALIGNMENT 0 YS2-14p23.q1k vc_2 62 804 2164 2163 F 743 0.00 1281 reject_low 3 ALIGNMENT 0 YS2-14p23.q1k vc_4 62 804 126 125 F 743 0.00 1281 reject_low 8 ALIGNMENT 0 YS2-14p23.q1k vc_5 888 803 2 1 C 86 0.00 1281 reject_low 18 ALIGNMENT 0 YS2-14p23.q1k vc_7 62 767 13525 13524 F 706 0.00 1281 reject_low 17 ALIGNMENT 298 YS2-14p23.q1k vc_7 1226 805 2300 2727 C 422 91.23 1281 reject_low 6 ALIGNMENT 291 YS2-14p23.q1k vc_4 1226 805 5383 5812 C 422 90.76 1281 reject_low 7 ALIGNMENT 298 YS2-14p23.q1k vc_1 805 1226 2531 2958 F 422 91.23 1281 reject_low 2 ALIGNMENT 39 YS2-14p23.q1k vc_5 805 767 5025 5063 C 39 100.00 1281 reject_low 15 ALIGNMENT 0 YS2-14p23.q1k vc_7 806 888 13562 13561 F 83 0.00 1281 reject_low 17 ALIGNMENT 37 YS2-14p23.q1k vc_7 1016 966 6360 6411 C 51 94.12 1281|1,0 reject_low 10 ALIGNMENT 0 YS2-14p23.q1k vc_4 62 765 5832 5831 F 704 0.00 1281 reject_low 9 ALIGNMENT 0 YS2-14p23.q1k vc_3 765 62 2512 2511 C 704 0.00 1281 reject_low 14 ALIGNMENT 153 YS2-14p23.q1k vc_4 805 966 6353 6514 F 162 98.77 1281|1,0 reject_low 9 ALIGNMENT 0 YS2-14p23.q1k vc_4 806 805 5872 6353 F 0 0.00 1281 reject_low 9 ALIGNMENT 298 YS2-14p23.q1k vc_5 805 1226 2398 2825 F 422 91.23 1281 reject_low 5 ALIGNMENT 690 YS2-14p23.p1k chr07 761 33 970842 971571 C 729 98.63 776 accept_chi 1 ALIGNMENT 38 YS2-14p23.q1k vc_7 768 805 63 100 F 38 100.00 1281 reject_low 16 ALIGNMENT 0 YS2-14p23.q1k vc_3 62 804 2531 2530 F 743 0.00 1281 reject_low 4 ALIGNMENT 0 YS2-14p23.q1k vc_5 766 62 5064 5063 C 705 0.00 1281 reject_low 15 ALIGNMENT 0 YS2-14p23.q1k chr07 766 888 971571 971570 F 123 0.00 1281 accept_chi 0 ALIGNMENT 40 YS2-14p23.q1k vc_1 805 766 2472 2511 C 40 100.00 1281 reject_low 12 ALIGNMENT 0 YS2-14p23.q1k vc_7 965 62 6412 6411 C 904 0.00 1281 reject_low 10 ALIGNMENT 111 YS2-14p23.q1k vc_7 1226 1015 4955 5172 C 212 84.91 1281|0,1 reject_low 10 ALIGNMENT 87 YS2-14p23.q1k vc_4 893 805 1446 1534 C 89 100.00 1281 reject_low 11 ALIGNMENT 0 YS2-14p23.q1k vc_7 804 62 2728 2727 C 743 0.00 1281 reject_low 6 ALIGNMENT 0 YS2-14p23.q1k vc_5 766 62 37 36 C 705 0.00 1281 reject_low 18 ALIGNMENT 0 YS2-14p23.q1k vc_1 888 806 2473 2472 C 83 0.00 1281 reject_low 12 ALIGNMENT 40 YS2-14p23.q1k vc_4 766 805 5832 5871 F 40 100.00 1281 reject_low 9 ALIGNMENT 0 YS2-14p23.q1k vc_7 806 888 100 99 F 83 0.00 1281 reject_low 16 ALIGNMENT 0 YS2-14p23.p1k chr07 776 762 970843 970842 C 15 0.00 776 accept_chi 1 ALIGNMENT 298 YS2-14p23.q1k vc_3 805 1226 2531 2958 F 422 91.23 1281 reject_low 4 ALIGNMENT 298 YS2-14p23.q1k vc_2 805 1226 2164 2591 F 422 91.23 1281 reject_low 3 ALIGNMENT 40 YS2-14p23.q1k vc_3 805 766 2472 2511 C 40 100.00 1281 reject_low 14 ALIGNMENT 38 YS2-14p23.q1k vc_7 768 805 13525 13562 F 38 100.00 1281 reject_low 17 ALIGNMENT 0 YS2-14p23.q1k vc_5 888 806 5026 5025 C 83 0.00 1281 reject_low 15 ALIGNMENT 0 YS2-14p23.q1k vc_2 765 62 2145 2144 C 704 0.00 1281 reject_low 13 ALIGNMENT 0 YS2-14p23.q1k vc_2 888 806 2106 2105 C 83 0.00 1281 reject_low 13 ALIGNMENT 0 YS2-14p23.q1k vc_7 62 767 63 62 F 706 0.00 1281 reject_low 16 ALIGNMENT 0 YS2-14p23.q1k vc_4 804 62 5813 5812 C 743 0.00 1281 reject_low 7 ALIGNMENT 40 YS2-14p23.q1k vc_2 805 766 2105 2144 C 40 100.00 1281 reject_low 13 ALIGNMENT 697 YS2-14p23.q1k chr07 40 765 970846 971571 F 726 99.04 1281 accept_chi 0 ALIGNMENT 0 YS2-14p24.p1k chr07 212 229 353977 353976 F 18 0.00 229 accept 0 ALIGNMENT 165 YS2-14p24.p1k chr07 25 211 353790 353977 F 187 97.86 229 accept 0 ALIGNMENT 212 YS2-15a01.p1k chr15 587 200 114331 114716 C 388 85.82 1387 accept 0 ALIGNMENT 69 YS2-15a01.p1k vc_1 763 618 1955 2093 C 146 85.62 1387 reject_low 1 ALIGNMENT 68 YS2-15a01.p1k vc_4 618 763 5883 6021 F 146 85.62 1387 reject_low 3 ALIGNMENT 69 YS2-15a01.p1k vc_3 763 618 1955 2093 C 146 85.62 1387 reject_low 2 ALIGNMENT 68 YS2-15a01.p1k vc_7 618 763 13574 13712 F 146 85.62 1387 reject_low 4 ALIGNMENT 571 YS2-15a02.p1k chr09 1143 186 297062 298007 C 958 88.41 1275 accept 0 ALIGNMENT 793 YS2-15a03.p1k chr04 30 950 1411174 1412084 F 921 96.53 1297 accept 0 ALIGNMENT 807 YS2-15a03.q1k chr04 991 30 1416454 1417418 C 962 95.53 1305 accept 0 ALIGNMENT 779 YS2-15a04.p1k chr11 35 1034 7115 8108 F 1000 94.50 1244 accept 0 ALIGNMENT 845 YS2-15a04.q1k chr11 1170 25 7488 8630 C 1146 93.63 1310 accept 0 ALIGNMENT 995 YS2-15a05.p1k chr02 27 1161 740761 741881 F 1135 97.09 1205 accept 0 ALIGNMENT 1044 YS2-15a05.q1k chr02 1261 32 744552 745787 C 1230 95.93 1269 accept 0 ALIGNMENT 0 YS2-15a06.q1k vc_4 62 211 5831 5830 F 150 0.00 252 reject_low 4 ALIGNMENT 0 YS2-15a06.q1k vc_3 211 62 2513 2512 C 150 0.00 252 reject_low 3 ALIGNMENT 38 YS2-15a06.q1k vc_7 215 252 13525 13562 F 38 100.00 252 reject_low 6 ALIGNMENT 171 YS2-15a06.p1k chr09 222 37 124124 124308 C 186 98.92 222 accept_chi 0 ALIGNMENT 170 YS2-15a06.q1k chr09 28 211 124124 124308 F 184 98.91 252 accept_chi 1 ALIGNMENT 39 YS2-15a06.q1k vc_5 252 214 5025 5063 C 39 100.00 252 reject_low 5 ALIGNMENT 41 YS2-15a06.q1k vc_3 252 212 2472 2512 C 41 100.00 252 reject_low 3 ALIGNMENT 36 YS2-15a06.q1k vc_5 249 214 1 36 C 36 100.00 252 reject_low 7 ALIGNMENT 0 YS2-15a06.q1k vc_7 62 214 13525 13524 F 153 0.00 252 reject_low 6 ALIGNMENT 0 YS2-15a06.q1k vc_5 213 62 37 36 C 152 0.00 252 reject_low 7 ALIGNMENT 0 YS2-15a06.q1k vc_1 211 62 2513 2512 C 150 0.00 252 reject_low 2 ALIGNMENT 0 YS2-15a06.q1k chr09 212 252 124308 124307 F 41 0.00 252 accept_chi 1 ALIGNMENT 41 YS2-15a06.q1k vc_1 252 212 2472 2512 C 41 100.00 252 reject_low 2 ALIGNMENT 0 YS2-15a06.q1k vc_5 213 62 5064 5063 C 152 0.00 252 reject_low 5 ALIGNMENT 41 YS2-15a06.q1k vc_4 212 252 5831 5871 F 41 100.00 252 reject_low 4 ALIGNMENT 733 YS2-15a07.p1k chr04 996 29 1186057 1187021 C 968 93.80 1295 accept 0 ALIGNMENT 1017 YS2-15a07.q1k chr04 35 1206 1182808 1183978 F 1172 96.25 1218 accept 0 ALIGNMENT 161 YS2-15a07.q1k chr08 618 1017 325772 326172 F 400 80.50 1218 reject_low 1 ALIGNMENT 0 YS2-15a07.q1k chr08 62 617 325772 325771 F 556 0.00 1218 reject_low 1 ALIGNMENT 930 YS2-15a08.p1k chr12 31 1090 456659 457717 F 1060 96.89 1317 accept 0 ALIGNMENT 1010 YS2-15a08.q1k chr12 1181 28 452238 453385 C 1154 96.45 1212 reject_low 2 ALIGNMENT 0 YS2-15a08.q1k chr12 837 62 490544 490543 C 776 0.00 1212 reject_low 3 ALIGNMENT 930 YS2-15a08.p1k chr12 31 1090 465796 466854 F 1060 96.89 1317 reject_low 1 ALIGNMENT 1011 YS2-15a08.q1k chr12 1201 28 461357 462522 C 1174 96.08 1212 accept 0 ALIGNMENT 199 YS2-15a08.q1k chr12 1201 838 490188 490543 C 364 86.81 1212 reject_low 3 ALIGNMENT 740 YS2-15a09.p1k chr12 37 1115 467046 468071 F 1079 92.68 1267 reject_low 2 ALIGNMENT 956 YS2-15a09.q1k chr12 1094 25 461824 462880 C 1070 97.38 1230 accept 0 ALIGNMENT 956 YS2-15a09.q1k chr12 1094 25 452687 453743 C 1070 97.38 1230 reject_low 1 ALIGNMENT 740 YS2-15a09.p1k chr12 37 1115 457909 458934 F 1079 92.68 1267 accept 0 ALIGNMENT 962 YS2-15a10.p1k chr04 30 1099 245329 246401 F 1070 97.48 1258 accept 0 ALIGNMENT 939 YS2-15a10.q1k chr04 1235 42 248807 249976 C 1194 95.14 1237 accept 0 ALIGNMENT 506 YS2-15a11.q1k chr12 31 554 468407 468930 F 524 99.81 1213 reject_low 2 ALIGNMENT 0 YS2-15a11.q1k chr12 555 828 485814 485813 F 274 0.00 1213 reject_low 7 ALIGNMENT 119 YS2-15a11.q1k chr12 436 554 485696 485814 F 119 100.00 1213 reject_low 7 ALIGNMENT 0 YS2-15a11.q1k chr06 828 177 31623 31622 C 652 0.00 1213 reject_low 4 ALIGNMENT 128 YS2-15a11.q1k chr12 436 569 489348 489481 F 134 98.51 1213 reject_low 3 ALIGNMENT 0 YS2-15a11.q1k chr12 62 435 482044 482043 F 374 0.00 1213 reject_low 6 ALIGNMENT 94 YS2-15a11.q1k chr06 176 69 31622 31729 C 108 98.15 1213 reject_low 4 ALIGNMENT 841 YS2-15a11.q1k chr12 31 1142 459270 460398 F 1112 94.15 1213 accept 0 ALIGNMENT 0 YS2-15a11.q1k chr12 62 435 489348 489347 F 374 0.00 1213 reject_low 3 ALIGNMENT 1021 YS2-15a11.p1k chr12 1151 28 462749 463879 C 1124 97.33 1287 accept 0 ALIGNMENT 1033 YS2-15a11.p1k chr12 1202 28 453557 454742 C 1175 96.43 1287 reject_low 1 ALIGNMENT 0 YS2-15a11.q1k chr12 570 828 489481 489480 F 259 0.00 1213 reject_low 3 ALIGNMENT 0 YS2-15a11.q1k chr12 555 828 482162 482161 F 274 0.00 1213 reject_low 6 ALIGNMENT 119 YS2-15a11.q1k chr12 436 554 472464 472582 F 119 100.00 1213 reject_low 5 ALIGNMENT 0 YS2-15a11.q1k chr12 555 828 468930 468929 F 274 0.00 1213 reject_low 2 ALIGNMENT 0 YS2-15a11.q1k chr12 555 828 472582 472581 F 274 0.00 1213 reject_low 5 ALIGNMENT 0 YS2-15a11.q1k chr12 62 435 472464 472463 F 374 0.00 1213 reject_low 5 ALIGNMENT 119 YS2-15a11.q1k chr12 436 554 482044 482162 F 119 100.00 1213 reject_low 6 ALIGNMENT 0 YS2-15a11.q1k chr12 62 435 485696 485695 F 374 0.00 1213 reject_low 7 ALIGNMENT 0 YS2-15a12.q1k chr07 914 62 728908 728907 C 853 0.00 1219 reject_low 3 ALIGNMENT 849 YS2-15a12.q1k chr16 36 1219 521171 522320 F 1184 93.50 1219 accept 0 ALIGNMENT 20 YS2-15a12.q1k chr07 936 915 728886 728907 C 22 100.00 1219 reject_low 3 ALIGNMENT 844 YS2-15a12.p1k chr16 1053 32 524253 525268 C 1022 95.89 1357 accept 0 ALIGNMENT 0 YS2-15a12.q1k chr07 915 62 53155 53154 C 854 0.00 1219 reject_low 2 ALIGNMENT 23 YS2-15a12.q1k chr14 917 945 70031 70059 F 29 100.00 1219 reject_low 1 ALIGNMENT 0 YS2-15a12.q1k chr14 62 916 70031 70030 F 855 0.00 1219 reject_low 1 ALIGNMENT 20 YS2-15a12.q1k chr07 940 916 53130 53154 C 25 100.00 1219 reject_low 2 ALIGNMENT 952 YS2-15a13.q1k chr12 30 1081 558812 559877 F 1052 97.72 1246 accept 0 ALIGNMENT 917 YS2-15a13.p1k chr12 1034 30 563563 564572 C 1005 98.41 1260 accept 0 ALIGNMENT 389 YS2-15a14.p1k vc_7 1 605 13918 14524 F 605 89.09 647 reject_vc 6 ALIGNMENT 0 YS2-15a14.q1k vc_7 62 263 13525 13524 F 202 0.00 301 reject_low 12 ALIGNMENT 39 YS2-15a14.q1k vc_5 301 263 5025 5063 C 39 100.00 301 reject_low 11 ALIGNMENT 223 YS2-15a14.q1k chr16 32 261 538879 539108 F 230 100.00 301 accept 0 ALIGNMENT 0 YS2-15a14.q1k chr16 262 301 539108 539107 F 40 0.00 301 accept 0 ALIGNMENT 36 YS2-15a14.q1k vc_5 298 263 1 36 C 36 100.00 301 reject_low 13 ALIGNMENT 395 YS2-15a14.p1k vc_1 605 1 1143 1749 C 605 89.42 647 reject_vc 2 ALIGNMENT 395 YS2-15a14.p1k vc_3 605 1 1143 1749 C 605 89.42 647 reject_vc 4 ALIGNMENT 0 YS2-15a14.q1k vc_1 260 62 2513 2512 C 199 0.00 301 reject_low 8 ALIGNMENT 390 YS2-15a14.p1k vc_6 1 577 3712 4290 F 577 90.47 647 reject_vc 7 ALIGNMENT 395 YS2-15a14.p1k vc_2 605 1 1143 1749 C 605 89.42 647 reject_vc 3 ALIGNMENT 0 YS2-15a14.q1k vc_3 260 62 2513 2512 C 199 0.00 301 reject_low 9 ALIGNMENT 0 YS2-15a14.q1k vc_5 262 62 5064 5063 C 201 0.00 301 reject_low 11 ALIGNMENT 38 YS2-15a14.q1k vc_7 264 301 13525 13562 F 38 100.00 301 reject_low 12 ALIGNMENT 398 YS2-15a14.p1k vc_5 605 1 4063 4669 C 605 89.59 647 reject_vc 1 ALIGNMENT 0 YS2-15a14.q1k vc_4 62 260 5831 5830 F 199 0.00 301 reject_low 10 ALIGNMENT 41 YS2-15a14.q1k vc_4 261 301 5831 5871 F 41 100.00 301 reject_low 10 ALIGNMENT 389 YS2-15a14.p1k vc_7 1 605 456 1062 F 605 89.09 647 reject_vc 5 ALIGNMENT 41 YS2-15a14.q1k vc_3 301 261 2472 2512 C 41 100.00 301 reject_low 9 ALIGNMENT 0 YS2-15a14.q1k vc_5 262 62 37 36 C 201 0.00 301 reject_low 13 ALIGNMENT 41 YS2-15a14.q1k vc_1 301 261 2472 2512 C 41 100.00 301 reject_low 8 ALIGNMENT 41 YS2-15a16.q1k vc_4 418 458 5831 5871 F 41 100.00 458 reject_low 5 ALIGNMENT 41 YS2-15a16.q1k vc_2 458 418 2105 2145 C 41 100.00 458 reject_low 3 ALIGNMENT 37 YS2-15a16.q1k vc_5 455 416 1 40 C 40 97.50 458 reject_low 8 ALIGNMENT 41 YS2-15a16.q1k vc_1 458 418 2472 2512 C 41 100.00 458 reject_low 2 ALIGNMENT 0 YS2-15a16.q1k vc_1 417 62 2513 2512 C 356 0.00 458 reject_low 2 ALIGNMENT 38 YS2-15a16.q1k vc_7 421 458 13525 13562 F 38 100.00 458 reject_low 7 ALIGNMENT 369 YS2-15a16.p1k chr09 34 410 229695 230071 F 377 100.00 429 accept_chi 0 ALIGNMENT 0 YS2-15a16.q1k vc_5 415 62 5068 5067 C 354 0.00 458 reject_low 6 ALIGNMENT 0 YS2-15a16.q1k vc_3 417 62 2513 2512 C 356 0.00 458 reject_low 4 ALIGNMENT 369 YS2-15a16.q1k chr09 417 41 229695 230071 C 377 100.00 458 accept_chi 1 ALIGNMENT 41 YS2-15a16.q1k vc_3 458 418 2472 2512 C 41 100.00 458 reject_low 4 ALIGNMENT 0 YS2-15a16.q1k vc_5 415 62 41 40 C 354 0.00 458 reject_low 8 ALIGNMENT 0 YS2-15a16.q1k vc_4 62 417 5831 5830 F 356 0.00 458 reject_low 5 ALIGNMENT 40 YS2-15a16.q1k vc_5 458 416 5025 5067 C 43 97.67 458 reject_low 6 ALIGNMENT 0 YS2-15a16.q1k vc_2 417 62 2146 2145 C 356 0.00 458 reject_low 3 ALIGNMENT 0 YS2-15a16.q1k chr09 458 418 229696 229695 C 41 0.00 458 accept_chi 1 ALIGNMENT 0 YS2-15a16.p1k chr09 411 429 230071 230070 F 19 0.00 429 accept_chi 0 ALIGNMENT 0 YS2-15a16.q1k vc_7 62 420 13525 13524 F 359 0.00 458 reject_low 7 ALIGNMENT 1018 YS2-15a18.p1k chr13 34 1187 599820 600975 F 1154 96.88 1189 accept 0 ALIGNMENT 1040 YS2-15a18.q1k chr13 1273 40 604348 605578 C 1234 95.95 1280 accept 0 ALIGNMENT 767 YS2-15a18.p1k chr13 34 1101 602030 603101 F 1068 91.29 1189 reject_low 1 ALIGNMENT 320 YS2-15a20.q1k vc_1 677 1103 2531 2957 F 427 92.74 1208 reject_low 4 ALIGNMENT 324 YS2-15a20.q1k vc_4 1202 677 5292 5812 C 526 88.97 1208 reject_low 3 ALIGNMENT 41 YS2-15a20.q1k vc_4 637 677 5831 5871 F 41 100.00 1208 reject_low 9 ALIGNMENT 534 YS2-15a20.q1k chr03 636 33 196838 197431 C 604 98.01 1208 accept_chi 1 ALIGNMENT 0 YS2-15a20.q1k vc_5 638 151 37 36 C 488 0.00 1208 reject_low 17 ALIGNMENT 159 YS2-15a20.q1k vc_4 677 838 6353 6514 F 162 100.00 1208|1,0 reject_low 9 ALIGNMENT 560 YS2-15a20.p1k chr03 31 623 196840 197433 F 593 98.99 624 accept_chi 0 ALIGNMENT 320 YS2-15a20.q1k vc_7 1103 677 2301 2727 C 427 92.74 1208 reject_low 7 ALIGNMENT 0 YS2-15a20.q1k vc_1 763 678 2473 2472 C 86 0.00 1208 reject_low 12 ALIGNMENT 0 YS2-15a20.q1k vc_7 678 763 13562 13561 F 86 0.00 1208 reject_low 16 ALIGNMENT 87 YS2-15a20.q1k vc_4 765 677 1446 1534 C 89 100.00 1208 reject_low 11 ALIGNMENT 0 YS2-15a20.q1k vc_2 636 151 2146 2145 C 486 0.00 1208 reject_low 13 ALIGNMENT 38 YS2-15a20.q1k vc_7 640 677 13525 13562 F 38 100.00 1208 reject_low 16 ALIGNMENT 320 YS2-15a20.q1k vc_2 677 1103 2164 2590 F 427 92.74 1208 reject_low 5 ALIGNMENT 0 YS2-15a20.q1k vc_4 676 151 5813 5812 C 526 0.00 1208 reject_low 3 ALIGNMENT 41 YS2-15a20.q1k vc_3 677 637 2472 2512 C 41 100.00 1208 reject_low 14 ALIGNMENT 36 YS2-15a20.q1k vc_5 674 639 1 36 C 36 100.00 1208 reject_low 17 ALIGNMENT 0 YS2-15a20.q1k vc_1 636 151 2513 2512 C 486 0.00 1208 reject_low 12 ALIGNMENT 0 YS2-15a20.q1k vc_5 763 675 2 1 C 89 0.00 1208 reject_low 17 ALIGNMENT 0 YS2-15a20.q1k vc_7 886 887 5172 6360 C 0 0.00 1208 reject_low 10 ALIGNMENT 0 YS2-15a20.q1k vc_7 151 639 13525 13524 F 489 0.00 1208 reject_low 16 ALIGNMENT 39 YS2-15a20.q1k vc_5 677 639 5025 5063 C 39 100.00 1208 reject_low 15 ALIGNMENT 0 YS2-15a20.q1k vc_4 151 636 5831 5830 F 486 0.00 1208 reject_low 9 ALIGNMENT 0 YS2-15a20.q1k chr03 763 637 196839 196838 C 127 0.00 1208 accept_chi 1 ALIGNMENT 320 YS2-15a20.q1k vc_3 677 1103 2531 2957 F 427 92.74 1208 reject_low 6 ALIGNMENT 0 YS2-15a20.q1k vc_2 151 676 2164 2163 F 526 0.00 1208 reject_low 5 ALIGNMENT 0 YS2-15a20.q1k vc_3 151 676 2531 2530 F 526 0.00 1208 reject_low 6 ALIGNMENT 0 YS2-15a20.q1k vc_7 836 151 6412 6411 C 686 0.00 1208 reject_low 10 ALIGNMENT 159 YS2-15a20.q1k vc_4 677 838 126 287 F 162 100.00 1208 reject_low 8 ALIGNMENT 41 YS2-15a20.q1k vc_1 677 637 2472 2512 C 41 100.00 1208 reject_low 12 ALIGNMENT 330 YS2-15a20.q1k vc_5 677 1202 2398 2916 F 526 89.35 1208 reject_low 2 ALIGNMENT 46 YS2-15a20.q1k vc_7 887 837 6360 6411 C 51 98.04 1208|1,0 reject_low 10 ALIGNMENT 0 YS2-15a20.q1k vc_7 676 151 2728 2727 C 526 0.00 1208 reject_low 7 ALIGNMENT 115 YS2-15a20.q1k vc_7 1103 886 4956 5172 C 218 85.78 1208|0,1 reject_low 10 ALIGNMENT 0 YS2-15a20.q1k vc_3 763 678 2473 2472 C 86 0.00 1208 reject_low 14 ALIGNMENT 0 YS2-15a20.q1k vc_1 151 676 2531 2530 F 526 0.00 1208 reject_low 4 ALIGNMENT 0 YS2-15a20.q1k vc_5 638 151 5064 5063 C 488 0.00 1208 reject_low 15 ALIGNMENT 0 YS2-15a20.q1k vc_5 763 678 5026 5025 C 86 0.00 1208 reject_low 15 ALIGNMENT 41 YS2-15a20.q1k vc_2 677 637 2105 2145 C 41 100.00 1208 reject_low 13 ALIGNMENT 0 YS2-15a20.q1k vc_3 636 151 2513 2512 C 486 0.00 1208 reject_low 14 ALIGNMENT 0 YS2-15a20.q1k vc_4 676 151 1535 1534 C 526 0.00 1208 reject_low 11 ALIGNMENT 0 YS2-15a20.q1k vc_5 151 676 2398 2397 F 526 0.00 1208 reject_low 2 ALIGNMENT 0 YS2-15a20.q1k vc_2 763 678 2106 2105 C 86 0.00 1208 reject_low 13 ALIGNMENT 0 YS2-15a20.q1k vc_4 151 676 126 125 F 526 0.00 1208 reject_low 8 ALIGNMENT 0 YS2-15a20.q1k vc_4 678 677 5872 6353 F 0 0.00 1208 reject_low 9 ALIGNMENT 73 YS2-15a22.p1k chr12 84 3 489348 489429 C 82 96.34 1197 reject_low 5 ALIGNMENT 0 YS2-15a22.p1k chr12 159 85 489349 489348 C 75 0.00 1197 reject_low 5 ALIGNMENT 0 YS2-15a22.p1k chr12 159 85 485697 485696 C 75 0.00 1197 reject_low 4 ALIGNMENT 73 YS2-15a22.p1k chr12 84 3 472464 472545 C 82 96.34 1197 reject_low 2 ALIGNMENT 951 YS2-15a22.q1k chr12 35 1133 463750 464829 F 1099 97.00 1209 accept 1 ALIGNMENT 951 YS2-15a22.q1k chr12 35 1133 454613 455692 F 1099 97.00 1209 accept 0 ALIGNMENT 73 YS2-15a22.p1k chr12 84 3 485696 485777 C 82 96.34 1197 reject_low 4 ALIGNMENT 73 YS2-15a22.p1k chr12 84 3 482044 482125 C 82 96.34 1197 reject_low 3 ALIGNMENT 0 YS2-15a22.p1k chr12 159 85 472465 472464 C 75 0.00 1197 reject_low 2 ALIGNMENT 186 YS2-15a22.p1k chr12 221 3 468675 468893 C 219 95.43 1197 accept 1 ALIGNMENT 0 YS2-15a22.p1k chr12 159 85 482045 482044 C 75 0.00 1197 reject_low 3 ALIGNMENT 186 YS2-15a22.p1k chr12 221 3 459538 459756 C 219 95.43 1197 accept 0 ALIGNMENT 922 YS2-15a23.p1k chr15 1068 33 37015 38046 C 1036 96.91 1073 accept 0 ALIGNMENT 967 YS2-15a23.q1k chr15 35 1108 32818 33887 F 1074 97.95 1108 accept 0 ALIGNMENT 595 YS2-15a24.q1k chr12 5 737 453085 453812 F 733 94.41 1062 manual 1 ALIGNMENT 597 YS2-15a24.q1k chr12 5 743 462222 462955 F 739 94.32 1062 manual 0 ALIGNMENT 901 YS2-15a24.p1k chr12 1003 31 456938 457903 C 973 98.56 1097 manual 1 ALIGNMENT 901 YS2-15a24.p1k chr12 1003 31 466075 467040 C 973 98.56 1097 manual 0 ALIGNMENT 90 YS2-15b01.p1k vc_1 1189 941 1857 2105 C 249 80.32 1233 reject_low 1 ALIGNMENT 0 YS2-15b01.p1k vc_3 940 62 2106 2105 C 879 0.00 1233 reject_low 2 ALIGNMENT 90 YS2-15b01.p1k vc_7 941 1189 13562 13810 F 249 80.72 1233 reject_low 5 ALIGNMENT 90 YS2-15b01.p1k vc_4 941 1189 5871 6119 F 249 80.72 1233 reject_low 3 ALIGNMENT 0 YS2-15b01.p1k vc_4 62 940 5871 5870 F 879 0.00 1233 reject_low 3 ALIGNMENT 90 YS2-15b01.p1k vc_3 1189 941 1857 2105 C 249 80.32 1233 reject_low 2 ALIGNMENT 0 YS2-15b01.p1k vc_1 940 62 2106 2105 C 879 0.00 1233 reject_low 1 ALIGNMENT 0 YS2-15b01.p1k vc_7 62 940 13562 13561 F 879 0.00 1233 reject_low 5 ALIGNMENT 0 YS2-15b01.p1k vc_7 62 940 100 99 F 879 0.00 1233 reject_low 4 ALIGNMENT 90 YS2-15b01.p1k vc_7 941 1189 100 348 F 249 80.72 1233 reject_low 4 ALIGNMENT 853 YS2-15b01.p1k chr10 31 923 319945 320840 F 893 99.44 1233 accept 0 ALIGNMENT 1020 YS2-15b02.p1k chr10 30 1246 95271 96472 F 1217 96.06 1254 accept 0 ALIGNMENT 1018 YS2-15b03.p1k chr13 31 1205 327252 328432 F 1175 97.28 1208 accept 0 ALIGNMENT 957 YS2-15b03.q1k chr13 1203 39 330804 331976 C 1165 95.36 1279 accept 0 ALIGNMENT 908 YS2-15b04.q1k chr14 1210 32 715654 716816 C 1179 95.34 1331 accept_chi 1 ALIGNMENT 968 YS2-15b04.p1k chr04 48 1129 1145184 1146277 F 1082 97.87 1205 accept_chi 0 ALIGNMENT 263 YS2-15b05.q1k vc_3 1 303 2689 2990 F 303 96.37 580 reject_vc 6 ALIGNMENT 119 YS2-15b05.q1k vc_4 312 568 1882 2140 F 257 83.27 580 reject_vc 8 ALIGNMENT 390 YS2-15b05.p1k chr13 496 32 512235 512698 C 465 95.70 515 accept 0 ALIGNMENT 263 YS2-15b05.q1k vc_2 1 303 2322 2623 F 303 96.37 580 reject_vc 5 ALIGNMENT 48 YS2-15b05.q1k vc_7 54 3 6360 6411 C 52 98.08 580|1,0 reject_vc 7 ALIGNMENT 332 YS2-15b05.q1k vc_4 420 1 5234 5654 C 420 93.81 580 reject_vc 3 ALIGNMENT 44 YS2-15b05.q1k vc_4 303 238 6275 6339 C 66 92.42 580 reject_low 10 ALIGNMENT 44 YS2-15b05.q1k vc_4 238 303 1548 1612 F 66 92.42 580 reject_vc 8 ALIGNMENT 0 YS2-15b05.q1k vc_4 304 311 1613 1881 F 8 0.00 580 reject_vc 8 ALIGNMENT 386 YS2-15b05.q1k vc_7 568 1 2001 2569 C 568 89.96 580 reject_vc 2 ALIGNMENT 44 YS2-15b05.q1k vc_4 303 238 48 112 C 66 92.42 580 reject_low 9 ALIGNMENT 386 YS2-15b05.q1k vc_5 1 568 2556 3124 F 568 90.14 580 reject_vc 1 ALIGNMENT 0 YS2-15b05.q1k vc_7 53 54 5172 6360 C 0 0.00 580 reject_vc 7 ALIGNMENT 0 YS2-15b05.q1k vc_7 305 304 4700 4922 C 2 0.00 580 reject_vc 7 ALIGNMENT 74 YS2-15b05.q1k vc_7 420 306 4585 4699 C 115 89.57 580 reject_vc 7 ALIGNMENT 263 YS2-15b05.q1k vc_1 1 303 2689 2990 F 303 96.37 580 reject_vc 4 ALIGNMENT 0 YS2-15b05.p1k chr13 515 497 512236 512235 C 19 0.00 515 accept 0 ALIGNMENT 212 YS2-15b05.q1k vc_7 303 53 4923 5172 C 251 95.62 580|0,1 reject_vc 7 ALIGNMENT 970 YS2-15b06.q1k chr16 1235 39 33999 35203 C 1197 94.74 1267 accept 0 ALIGNMENT 1032 YS2-15b06.p1k chr16 32 1186 30708 31856 F 1155 97.40 1186 accept 0 ALIGNMENT 0 YS2-15b07.q1k vc_1 374 62 2513 2512 C 313 0.00 415 reject_low 8 ALIGNMENT 0 YS2-15b07.q1k vc_5 376 62 5064 5063 C 315 0.00 415 reject_low 12 ALIGNMENT 0 YS2-15b07.q1k vc_2 374 62 2146 2145 C 313 0.00 415 reject_low 9 ALIGNMENT 0 YS2-15b07.q1k vc_4 62 374 5831 5830 F 313 0.00 415 reject_low 11 ALIGNMENT 200 YS2-15b07.p1k vc_1 391 1 1368 1749 C 391 85.42 581 reject_vc 1 ALIGNMENT 200 YS2-15b07.p1k vc_3 391 1 1368 1749 C 391 85.42 581 reject_vc 3 ALIGNMENT 39 YS2-15b07.q1k vc_5 415 377 5025 5063 C 39 100.00 415 reject_low 12 ALIGNMENT 0 YS2-15b07.q1k chr08 381 415 312336 312335 F 35 0.00 415 accept 0 ALIGNMENT 41 YS2-15b07.q1k vc_3 415 375 2472 2512 C 41 100.00 415 reject_low 10 ALIGNMENT 200 YS2-15b07.p1k vc_2 391 1 1368 1749 C 391 85.42 581 reject_vc 2 ALIGNMENT 41 YS2-15b07.q1k vc_2 415 375 2105 2145 C 41 100.00 415 reject_low 9 ALIGNMENT 200 YS2-15b07.p1k vc_5 391 1 4288 4669 C 391 85.42 581 reject_vc 4 ALIGNMENT 194 YS2-15b07.p1k vc_7 1 391 456 837 F 391 84.91 581 reject_vc 5 ALIGNMENT 36 YS2-15b07.q1k vc_5 412 377 1 36 C 36 100.00 415 reject_low 14 ALIGNMENT 0 YS2-15b07.q1k vc_3 374 62 2513 2512 C 313 0.00 415 reject_low 10 ALIGNMENT 41 YS2-15b07.q1k vc_1 415 375 2472 2512 C 41 100.00 415 reject_low 8 ALIGNMENT 41 YS2-15b07.q1k vc_4 375 415 5831 5871 F 41 100.00 415 reject_low 11 ALIGNMENT 0 YS2-15b07.q1k vc_5 376 62 37 36 C 315 0.00 415 reject_low 14 ALIGNMENT 194 YS2-15b07.p1k vc_7 1 391 13918 14299 F 391 84.91 581 reject_vc 6 ALIGNMENT 0 YS2-15b07.q1k vc_7 62 377 13525 13524 F 316 0.00 415 reject_low 13 ALIGNMENT 192 YS2-15b07.p1k vc_6 1 330 3712 4036 F 330 87.27 581 reject_vc 7 ALIGNMENT 38 YS2-15b07.q1k vc_7 378 415 13525 13562 F 38 100.00 415 reject_low 13 ALIGNMENT 342 YS2-15b07.q1k chr08 32 380 311988 312336 F 349 99.71 415 accept 0 ALIGNMENT 0 YS2-15b08.q1k chr13 362 62 586710 586709 C 301 0.00 1215 reject_low 16 ALIGNMENT 0 YS2-15b08.q1k chr16 78 62 850801 850800 C 17 0.00 1215 reject_low 6 ALIGNMENT 0 YS2-15b08.q1k chr03 831 246 124142 124141 C 586 0.00 1215 reject_low 7 ALIGNMENT 82 YS2-15b08.q1k chr07 361 442 823484 823565 F 82 100.00 1215 reject_low 13 ALIGNMENT 708 YS2-15b08.p1k chr15 23 1090 660089 661163 F 1068 89.89 1273 accept 0 ALIGNMENT 21 YS2-15b08.q1k chr15 108 192 664329 664412 F 85 77.65 1215 reject_low 23 ALIGNMENT 0 YS2-15b08.q1k chr11 350 62 307877 307876 C 289 0.00 1215 reject_low 10 ALIGNMENT 0 YS2-15b08.q1k chr04 246 831 803220 803219 F 586 0.00 1215 reject_low 8 ALIGNMENT 82 YS2-15b08.q1k chr11 442 351 307784 307876 C 92 96.74 1215 reject_low 10 ALIGNMENT 82 YS2-15b08.q1k chr04 38 245 803015 803220 F 208 82.21 1215 reject_low 8 ALIGNMENT 106 YS2-15b08.q1k chr07 38 234 535330 535525 F 197 86.29 1215 reject_low 2 ALIGNMENT 0 YS2-15b08.q1k chr07 831 440 73827 73826 C 392 0.00 1215 reject_low 14 ALIGNMENT 78 YS2-15b08.q1k chr05 350 442 438683 438774 F 93 95.70 1215 reject_low 11 ALIGNMENT 985 YS2-15b08.q1k chr15 1215 32 663042 664217 C 1184 96.03 1215 accept 0 ALIGNMENT 0 YS2-15b08.q1k chr16 78 62 856389 856388 C 17 0.00 1215 reject_low 5 ALIGNMENT 87 YS2-15b08.q1k chr03 245 38 124141 124347 C 208 82.69 1215 reject_low 7 ALIGNMENT 95 YS2-15b08.q1k chr16 245 79 850635 850800 C 167 88.02 1215 reject_low 6 ALIGNMENT 74 YS2-15b08.q1k chr11 364 437 379323 379396 F 74 100.00 1215 reject_low 21 ALIGNMENT 79 YS2-15b08.q1k chr05 363 442 469451 469530 F 80 100.00 1215 reject_low 15 ALIGNMENT 0 YS2-15b08.q1k chr07 443 831 823565 823564 F 389 0.00 1215 reject_low 13 ALIGNMENT 76 YS2-15b08.q1k chr10 364 442 378276 378354 F 79 98.73 1215 reject_low 19 ALIGNMENT 0 YS2-15b08.q1k chr11 62 363 379323 379322 F 302 0.00 1215 reject_low 21 ALIGNMENT 27 YS2-15b08.q1k chr05 234 193 469347 469388 C 42 88.10 1215 reject_low 22 ALIGNMENT 79 YS2-15b08.q1k chr12 442 364 687856 687934 C 79 100.00 1215 reject_low 17 ALIGNMENT 80 YS2-15b08.q1k chr13 443 364 420581 420660 C 80 100.00 1215 reject_low 12 ALIGNMENT 0 YS2-15b08.q1k chr16 831 246 850636 850635 C 586 0.00 1215 reject_low 6 ALIGNMENT 0 YS2-15b08.q1k chr02 207 831 327346 327345 F 625 0.00 1215 reject_low 3 ALIGNMENT 93 YS2-15b08.q1k chr02 34 206 327176 327346 F 173 87.28 1215 reject_low 3 ALIGNMENT 0 YS2-15b08.q1k chr11 831 443 307785 307784 C 389 0.00 1215 reject_low 10 ALIGNMENT 0 YS2-15b08.q1k chr05 443 831 438774 438773 F 389 0.00 1215 reject_low 11 ALIGNMENT 0 YS2-15b08.q1k chr10 62 363 378276 378275 F 302 0.00 1215 reject_low 19 ALIGNMENT 106 YS2-15b08.q1k chr15 38 251 594936 595148 F 214 85.05 1215 reject_low 1 ALIGNMENT 79 YS2-15b08.q1k chr07 439 361 73826 73904 C 79 100.00 1215 reject_low 14 ALIGNMENT 0 YS2-15b08.q1k chr13 831 443 586631 586630 C 389 0.00 1215 reject_low 16 ALIGNMENT 0 YS2-15b08.q1k chr05 62 349 438683 438682 F 288 0.00 1215 reject_low 11 ALIGNMENT 0 YS2-15b08.q1k chr11 438 831 379396 379395 F 394 0.00 1215 reject_low 21 ALIGNMENT 81 YS2-15b08.q1k chr13 442 350 372439 372531 C 93 95.70 1215 reject_low 9 ALIGNMENT 0 YS2-15b08.q1k chr07 235 831 535525 535524 F 597 0.00 1215 reject_low 2 ALIGNMENT 0 YS2-15b08.q1k chr07 362 62 412372 412371 C 301 0.00 1215 reject_low 20 ALIGNMENT 0 YS2-15b08.q1k chr15 252 831 595148 595147 F 580 0.00 1215 reject_low 1 ALIGNMENT 0 YS2-15b08.q1k chr07 831 438 412298 412297 C 394 0.00 1215 reject_low 20 ALIGNMENT 79 YS2-15b08.q1k chr13 442 363 586630 586709 C 80 100.00 1215 reject_low 16 ALIGNMENT 0 YS2-15b08.q1k chr07 360 62 73905 73904 C 299 0.00 1215 reject_low 14 ALIGNMENT 0 YS2-15b08.q1k chr13 363 62 420661 420660 C 302 0.00 1215 reject_low 12 ALIGNMENT 0 YS2-15b08.q1k chr10 443 831 378354 378353 F 389 0.00 1215 reject_low 19 ALIGNMENT 0 YS2-15b08.q1k chr12 363 62 687935 687934 C 302 0.00 1215 reject_low 17 ALIGNMENT 0 YS2-15b08.q1k chr08 831 443 85290 85289 C 389 0.00 1215 reject_low 18 ALIGNMENT 0 YS2-15b08.q1k chr13 831 443 372440 372439 C 389 0.00 1215 reject_low 9 ALIGNMENT 0 YS2-15b08.q1k chr15 193 831 664412 664411 F 639 0.00 1215 reject_low 23 ALIGNMENT 0 YS2-15b08.q1k chr05 443 831 469530 469529 F 389 0.00 1215 reject_low 15 ALIGNMENT 0 YS2-15b08.q1k chr05 831 235 469348 469347 C 597 0.00 1215 reject_low 22 ALIGNMENT 0 YS2-15b08.q1k chr07 62 360 823484 823483 F 299 0.00 1215 reject_low 13 ALIGNMENT 0 YS2-15b08.q1k chr08 362 62 85369 85368 C 301 0.00 1215 reject_low 18 ALIGNMENT 0 YS2-15b08.q1k chr05 831 246 443404 443403 C 586 0.00 1215 reject_low 4 ALIGNMENT 0 YS2-15b08.q1k chr13 831 444 420582 420581 C 388 0.00 1215 reject_low 12 ALIGNMENT 0 YS2-15b08.q1k chr12 831 443 687857 687856 C 389 0.00 1215 reject_low 17 ALIGNMENT 0 YS2-15b08.q1k chr16 831 246 856224 856223 C 586 0.00 1215 reject_low 5 ALIGNMENT 0 YS2-15b08.q1k chr05 78 62 443569 443568 C 17 0.00 1215 reject_low 4 ALIGNMENT 75 YS2-15b08.q1k chr07 437 363 412297 412371 C 75 100.00 1215 reject_low 20 ALIGNMENT 97 YS2-15b08.q1k chr16 245 79 856223 856388 C 167 88.02 1215 reject_low 5 ALIGNMENT 76 YS2-15b08.q1k chr08 442 363 85289 85368 C 80 98.75 1215 reject_low 18 ALIGNMENT 97 YS2-15b08.q1k chr05 245 79 443403 443568 C 167 88.02 1215 reject_low 4 ALIGNMENT 0 YS2-15b08.q1k chr05 62 362 469451 469450 F 301 0.00 1215 reject_low 15 ALIGNMENT 0 YS2-15b08.q1k chr13 349 62 372532 372531 C 288 0.00 1215 reject_low 9 ALIGNMENT 0 YS2-15b08.q1k chr05 192 62 469389 469388 C 131 0.00 1215 reject_low 22 ALIGNMENT 0 YS2-15b08.q1k chr15 62 107 664329 664328 F 46 0.00 1215 reject_low 23 ALIGNMENT 0 YS2-15b09.q1k vc_3 507 62 2513 2512 C 446 0.00 548 reject_low 4 ALIGNMENT 39 YS2-15b09.q1k vc_5 548 510 5025 5063 C 39 100.00 548 reject_low 6 ALIGNMENT 0 YS2-15b09.p1k chr16 504 522 790703 790702 F 19 0.00 522 accept_chi 1 ALIGNMENT 0 YS2-15b09.q1k vc_4 62 507 5831 5830 F 446 0.00 548 reject_low 5 ALIGNMENT 41 YS2-15b09.q1k vc_1 548 508 2472 2512 C 41 100.00 548 reject_low 2 ALIGNMENT 36 YS2-15b09.q1k vc_5 545 510 1 36 C 36 100.00 548 reject_low 9 ALIGNMENT 0 YS2-15b09.q1k vc_7 62 510 63 62 F 449 0.00 548 reject_low 7 ALIGNMENT 0 YS2-15b09.q1k vc_5 509 62 5064 5063 C 448 0.00 548 reject_low 6 ALIGNMENT 38 YS2-15b09.q1k vc_7 511 548 13525 13562 F 38 100.00 548 reject_low 8 ALIGNMENT 0 YS2-15b09.q1k vc_5 509 62 37 36 C 448 0.00 548 reject_low 9 ALIGNMENT 41 YS2-15b09.q1k vc_2 548 508 2105 2145 C 41 100.00 548 reject_low 3 ALIGNMENT 0 YS2-15b09.q1k vc_7 62 510 13525 13524 F 449 0.00 548 reject_low 8 ALIGNMENT 41 YS2-15b09.q1k vc_3 548 508 2472 2512 C 41 100.00 548 reject_low 4 ALIGNMENT 0 YS2-15b09.q1k vc_1 507 62 2513 2512 C 446 0.00 548 reject_low 2 ALIGNMENT 0 YS2-15b09.q1k chr16 548 509 790227 790226 C 40 0.00 548 accept_chi 0 ALIGNMENT 463 YS2-15b09.p1k chr16 30 503 790230 790703 F 474 99.58 522 accept_chi 1 ALIGNMENT 0 YS2-15b09.q1k vc_2 507 62 2146 2145 C 446 0.00 548 reject_low 3 ALIGNMENT 38 YS2-15b09.q1k vc_7 511 548 63 100 F 38 100.00 548 reject_low 7 ALIGNMENT 41 YS2-15b09.q1k vc_4 508 548 5831 5871 F 41 100.00 548 reject_low 5 ALIGNMENT 467 YS2-15b09.q1k chr16 508 31 790226 790703 C 478 99.58 548 accept_chi 0 ALIGNMENT 929 YS2-15b10.p1k chr13 1166 37 778910 780025 C 1130 96.28 1263 accept 0 ALIGNMENT 954 YS2-15b10.q1k chr13 35 1193 777718 778862 F 1159 96.55 1239 accept 0 ALIGNMENT 0 YS2-15b11.q1k vc_1 292 92 2513 2512 C 201 0.00 1274 reject_vc 13 ALIGNMENT 41 YS2-15b11.q1k vc_1 333 293 2472 2512 C 41 100.00 1274 reject_vc 13 ALIGNMENT 244 YS2-15b11.q1k vc_7 656 333 2408 2727 C 324 93.21 1274 reject_vc 8 ALIGNMENT 0 YS2-15b11.q1k vc_5 92 332 2398 2397 F 241 0.00 1274 reject_vc 7 ALIGNMENT 0 YS2-15b11.q1k vc_2 292 92 2146 2145 C 201 0.00 1274 reject_vc 14 ALIGNMENT 0 YS2-15b11.q1k vc_4 92 332 126 125 F 241 0.00 1274 reject_vc 10 ALIGNMENT 0 YS2-15b11.q1k vc_5 450 331 2 1 C 120 0.00 1274 reject_vc 19 ALIGNMENT 0 YS2-15b11.q1k vc_3 450 334 2473 2472 C 117 0.00 1274 reject_vc 15 ALIGNMENT 38 YS2-15b11.q1k vc_7 296 333 13525 13562 F 38 100.00 1274 reject_vc 18 ALIGNMENT 245 YS2-15b11.q1k vc_3 333 656 2531 2850 F 324 93.21 1274 reject_vc 6 ALIGNMENT 38 YS2-15b11.q1k vc_7 296 333 63 100 F 38 100.00 1274 reject_vc 17 ALIGNMENT 0 YS2-15b11.q1k vc_4 450 422 1447 1446 C 29 0.00 1274 reject_vc 12 ALIGNMENT 0 YS2-15b11.q1k vc_7 492 92 6412 6411 C 401 0.00 1274 reject_vc 20 ALIGNMENT 41 YS2-15b11.q1k vc_4 293 333 5831 5871 F 41 100.00 1274 reject_vc 11 ALIGNMENT 0 YS2-15b11.q1k vc_5 450 334 5026 5025 C 117 0.00 1274 reject_vc 16 ALIGNMENT 0 YS2-15b11.q1k vc_4 92 292 5831 5830 F 201 0.00 1274 reject_vc 11 ALIGNMENT 0 YS2-15b11.q1k vc_7 92 295 63 62 F 204 0.00 1274 reject_vc 17 ALIGNMENT 84 YS2-15b11.q1k vc_4 421 333 1446 1534 C 89 98.88 1274 reject_vc 12 ALIGNMENT 201 YS2-15b11.q1k chr16 293 60 17807 18038 C 234 97.86 1274 ambiguous_tel 1 ALIGNMENT 0 YS2-15b11.q1k vc_7 334 450 100 99 F 117 0.00 1274 reject_vc 17 ALIGNMENT 0 YS2-15b11.q1k vc_4 332 92 5813 5812 C 241 0.00 1274 reject_vc 9 ALIGNMENT 245 YS2-15b11.q1k vc_5 333 656 2398 2717 F 324 93.21 1274 reject_vc 7 ALIGNMENT 237 YS2-15b11.q1k vc_4 656 333 5491 5812 C 324 92.59 1274 reject_vc 9 ALIGNMENT 39 YS2-15b11.q1k vc_5 333 295 5025 5063 C 39 100.00 1274 reject_vc 16 ALIGNMENT 0 YS2-15b11.q1k vc_3 92 332 2531 2530 F 241 0.00 1274 reject_vc 6 ALIGNMENT 46 YS2-15b11.q1k vc_7 656 543 5063 5172 C 114 83.33 1274|0,1 reject_vc 20 ALIGNMENT 0 YS2-15b11.q1k chr16 450 294 17808 17807 C 157 0.00 1274 ambiguous_tel 1 ALIGNMENT 0 YS2-15b11.p1k chr16 263 279 18042 18041 F 17 0.00 279 ambiguous_tel 0 ALIGNMENT 0 YS2-15b11.q1k vc_4 332 92 1535 1534 C 241 0.00 1274 reject_vc 12 ALIGNMENT 245 YS2-15b11.q1k vc_1 333 656 2531 2850 F 324 93.21 1274 reject_vc 4 ALIGNMENT 0 YS2-15b11.q1k vc_5 294 92 37 36 C 203 0.00 1274 reject_vc 19 ALIGNMENT 0 YS2-15b11.p1k chr15 279 263 1072826 1072825 C 17 0.00 279 ambiguous_tel 2 ALIGNMENT 156 YS2-15b11.q1k vc_4 333 494 126 287 F 162 99.38 1274 reject_vc 10 ALIGNMENT 156 YS2-15b11.q1k vc_4 333 494 6353 6514 F 162 99.38 1274|1,0 reject_vc 11 ALIGNMENT 0 YS2-15b11.q1k vc_7 92 295 13525 13524 F 204 0.00 1274 reject_vc 18 ALIGNMENT 0 YS2-15b11.q1k vc_4 334 333 5872 6353 F 0 0.00 1274 reject_vc 11 ALIGNMENT 167 YS2-15b11.q1k chr15 55 293 1072825 1073061 F 239 92.89 1274 ambiguous_tel 3 ALIGNMENT 0 YS2-15b11.q1k vc_7 332 92 2728 2727 C 241 0.00 1274 reject_vc 8 ALIGNMENT 184 YS2-15b11.p1k chr15 262 27 1072825 1073061 C 236 94.92 279 ambiguous_tel 2 ALIGNMENT 218 YS2-15b11.p1k chr16 27 262 17807 18042 F 236 99.58 279 ambiguous_tel 0 ALIGNMENT 0 YS2-15b11.q1k vc_2 450 334 2106 2105 C 117 0.00 1274 reject_vc 14 ALIGNMENT 0 YS2-15b11.q1k vc_7 543 544 5172 6360 C 0 0.00 1274 reject_vc 20 ALIGNMENT 0 YS2-15b11.q1k vc_7 334 450 13562 13561 F 117 0.00 1274 reject_vc 18 ALIGNMENT 0 YS2-15b11.q1k vc_1 92 332 2531 2530 F 241 0.00 1274 reject_vc 4 ALIGNMENT 0 YS2-15b11.q1k vc_1 450 334 2473 2472 C 117 0.00 1274 reject_vc 13 ALIGNMENT 0 YS2-15b11.q1k vc_3 292 92 2513 2512 C 201 0.00 1274 reject_vc 15 ALIGNMENT 245 YS2-15b11.q1k vc_2 333 656 2164 2483 F 324 93.21 1274 reject_vc 5 ALIGNMENT 36 YS2-15b11.q1k vc_5 330 295 1 36 C 36 100.00 1274 reject_vc 19 ALIGNMENT 0 YS2-15b11.q1k vc_2 92 332 2164 2163 F 241 0.00 1274 reject_vc 5 ALIGNMENT 0 YS2-15b11.q1k chr15 294 450 1073061 1073060 F 157 0.00 1274 ambiguous_tel 3 ALIGNMENT 0 YS2-15b11.q1k vc_5 294 92 5064 5063 C 203 0.00 1274 reject_vc 16 ALIGNMENT 41 YS2-15b11.q1k vc_3 333 293 2472 2512 C 41 100.00 1274 reject_vc 15 ALIGNMENT 41 YS2-15b11.q1k vc_2 333 293 2105 2145 C 41 100.00 1274 reject_vc 14 ALIGNMENT 42 YS2-15b11.q1k vc_7 544 493 6360 6411 C 52 94.23 1274|1,0 reject_vc 20 ALIGNMENT 240 YS2-15b13.q1k chr12 84 649 558850 559398 F 566 83.75 1371 accept 0 ALIGNMENT 1001 YS2-15b14.q1k chr12 1221 35 194979 196178 C 1187 96.29 1301 accept 0 ALIGNMENT 1029 YS2-15b14.p1k chr12 30 1282 194796 196047 F 1253 95.21 1289 accept 0 ALIGNMENT 1021 YS2-15b15.p1k chr15 32 1164 743107 744240 F 1133 97.62 1164 accept 0 ALIGNMENT 878 YS2-15b15.q1k chr15 1094 29 747629 748711 C 1066 96.44 1207 accept 0 ALIGNMENT 766 YS2-15b16.q1k chr08 30 907 241289 242167 F 878 97.49 1241 accept 0 ALIGNMENT 1028 YS2-15b16.p1k chr08 1155 33 246271 247399 C 1123 97.86 1162 accept 0 ALIGNMENT 0 YS2-15b17.q1k chr11 534 854 490691 490690 F 321 0.00 1317 reject_low 3 ALIGNMENT 0 YS2-15b17.q1k chr11 62 447 490606 490605 F 386 0.00 1317 reject_low 3 ALIGNMENT 0 YS2-15b17.q1k chr05 452 62 492420 492419 C 391 0.00 1317 reject_low 4 ALIGNMENT 928 YS2-15b17.q1k chr04 1156 36 619340 620453 C 1121 95.72 1317 accept 0 ALIGNMENT 73 YS2-15b17.q1k chr10 448 526 233851 233929 F 79 97.47 1317 reject_low 5 ALIGNMENT 1019 YS2-15b17.p1k chr04 34 1191 616151 617312 F 1158 97.06 1191 accept 0 ALIGNMENT 0 YS2-15b17.q1k chr05 854 534 492339 492338 C 321 0.00 1317 reject_low 4 ALIGNMENT 0 YS2-15b17.q1k chr10 62 447 233851 233850 F 386 0.00 1317 reject_low 5 ALIGNMENT 83 YS2-15b17.q1k chr11 448 533 490606 490691 F 86 98.84 1317 reject_low 3 ALIGNMENT 84 YS2-15b17.q1k chr15 540 451 340284 340373 C 90 97.78 1317 reject_low 2 ALIGNMENT 0 YS2-15b17.q1k chr15 854 541 340285 340284 C 314 0.00 1317 reject_low 2 ALIGNMENT 0 YS2-15b17.q1k chr12 62 440 374344 374343 F 379 0.00 1317 reject_low 1 ALIGNMENT 74 YS2-15b17.q1k chr05 533 453 492338 492419 C 81 97.53 1317 reject_low 4 ALIGNMENT 0 YS2-15b17.q1k chr12 534 854 374436 374435 F 321 0.00 1317 reject_low 1 ALIGNMENT 0 YS2-15b17.q1k chr15 450 62 340374 340373 C 389 0.00 1317 reject_low 2 ALIGNMENT 0 YS2-15b17.q1k chr10 527 854 233929 233928 F 328 0.00 1317 reject_low 5 ALIGNMENT 90 YS2-15b17.q1k chr12 441 533 374344 374436 F 93 98.92 1317 reject_low 1 ALIGNMENT 68 YS2-15b18.p1k chr16 218 40 856079 856256 C 179 80.45 1206 reject_low 24 ALIGNMENT 0 YS2-15b18.p1k chr04 856 222 519176 519175 C 635 0.00 1206 reject_low 13 ALIGNMENT 0 YS2-15b18.p1k chr13 856 218 362454 362453 C 639 0.00 1206 reject_low 25 ALIGNMENT 0 YS2-15b18.p1k chr13 219 856 184635 184634 F 638 0.00 1206 reject_low 18 ALIGNMENT 0 YS2-15b18.p1k chr14 856 222 567525 567524 C 635 0.00 1206 reject_low 12 ALIGNMENT 83 YS2-15b18.p1k chr10 40 218 472671 472848 F 179 83.24 1206 reject_low 16 ALIGNMENT 86 YS2-15b18.p1k chr07 218 40 567297 567474 C 179 83.80 1206 reject_low 14 ALIGNMENT 0 YS2-15b18.p1k chr16 856 219 810092 810091 C 638 0.00 1206 reject_low 23 ALIGNMENT 0 YS2-15b18.p1k chr07 222 856 811920 811919 F 635 0.00 1206 reject_low 5 ALIGNMENT 0 YS2-15b18.p1k chr04 222 856 981633 981632 F 635 0.00 1206 reject_low 3 ALIGNMENT 155 YS2-15b18.p1k chr07 221 46 574236 574411 C 176 96.59 1206 reject_low 10 ALIGNMENT 83 YS2-15b18.p1k chr10 40 218 478255 478432 F 179 83.24 1206 reject_low 17 ALIGNMENT 68 YS2-15b18.p1k chr13 217 40 362453 362629 C 178 81.46 1206 reject_low 25 ALIGNMENT 83 YS2-15b18.p1k chr07 40 218 536058 536235 F 179 83.24 1206 reject_low 15 ALIGNMENT 161 YS2-15b18.p1k chr06 46 221 138201 138376 F 176 97.73 1206 reject_low 4 ALIGNMENT 0 YS2-15b18.p1k chr06 222 856 138376 138375 F 635 0.00 1206 reject_low 4 ALIGNMENT 0 YS2-15b18.p1k chr04 222 856 872284 872283 F 635 0.00 1206 reject_low 6 ALIGNMENT 161 YS2-15b18.p1k chr07 46 221 811745 811920 F 176 97.73 1206 reject_low 5 ALIGNMENT 156 YS2-15b18.p1k chr04 39 221 981452 981633 F 183 96.17 1206 reject_low 3 ALIGNMENT 159 YS2-15b18.p1k chr12 221 39 981228 981409 C 183 96.72 1206 reject_low 2 ALIGNMENT 0 YS2-15b18.p1k chr13 219 856 196802 196801 F 638 0.00 1206 reject_low 19 ALIGNMENT 0 YS2-15b18.p1k chr10 219 856 472848 472847 F 638 0.00 1206 reject_low 16 ALIGNMENT 0 YS2-15b18.p1k chr15 856 222 709556 709555 C 635 0.00 1206 reject_low 11 ALIGNMENT 0 YS2-15b18.p1k chr15 222 856 970750 970749 F 635 0.00 1206 reject_low 7 ALIGNMENT 83 YS2-15b18.p1k chr13 40 218 184458 184635 F 179 83.24 1206 reject_low 18 ALIGNMENT 155 YS2-15b18.p1k chr15 221 46 709555 709730 C 176 96.59 1206 reject_low 11 ALIGNMENT 0 YS2-15b18.p1k chr07 219 856 536235 536234 F 638 0.00 1206 reject_low 15 ALIGNMENT 0 YS2-15b18.p1k chr12 856 222 981229 981228 C 635 0.00 1206 reject_low 2 ALIGNMENT 155 YS2-15b18.p1k chr03 46 221 85103 85278 F 176 96.59 1206 reject_low 9 ALIGNMENT 0 YS2-15b18.p1k chr07 856 222 574237 574236 C 635 0.00 1206 reject_low 10 ALIGNMENT 0 YS2-15b18.p1k chr16 219 856 844879 844878 F 638 0.00 1206 reject_low 22 ALIGNMENT 153 YS2-15b18.p1k chr04 39 221 872103 872284 F 183 95.63 1206 reject_low 6 ALIGNMENT 0 YS2-15b18.p1k chr14 220 62 340970 340969 C 159 0.00 1206 accept 0 ALIGNMENT 153 YS2-15b18.p1k chr15 39 221 970569 970750 F 183 95.63 1206 reject_low 7 ALIGNMENT 20 YS2-15b18.p1k chr16 67 40 850642 850668 C 28 96.43 1206 reject_low 26 ALIGNMENT 77 YS2-15b18.p1k chr16 218 40 810091 810268 C 179 82.12 1206 reject_low 23 ALIGNMENT 158 YS2-15b18.p1k chr12 46 221 941482 941657 F 176 97.16 1206 reject_low 8 ALIGNMENT 1010 YS2-15b18.q1k chr14 44 1277 336772 337997 F 1234 95.38 1285 accept 0 ALIGNMENT 0 YS2-15b18.p1k chr13 856 219 378151 378150 C 638 0.00 1206 reject_low 21 ALIGNMENT 83 YS2-15b18.p1k chr13 40 218 196625 196802 F 179 83.24 1206 reject_low 19 ALIGNMENT 80 YS2-15b18.p1k chr16 40 218 844702 844879 F 179 82.68 1206 reject_low 22 ALIGNMENT 0 YS2-15b18.p1k chr16 856 68 850643 850642 C 789 0.00 1206 reject_low 26 ALIGNMENT 0 YS2-15b18.p1k chr12 856 219 220536 220535 C 638 0.00 1206 reject_low 20 ALIGNMENT 159 YS2-15b18.p1k chr02 39 221 29928 30109 F 183 96.72 1206 reject_low 1 ALIGNMENT 0 YS2-15b18.p1k chr10 219 856 478432 478431 F 638 0.00 1206 reject_low 17 ALIGNMENT 149 YS2-15b18.p1k chr04 221 46 519175 519350 C 176 95.45 1206 reject_low 13 ALIGNMENT 0 YS2-15b18.p1k chr02 222 856 30109 30108 F 635 0.00 1206 reject_low 1 ALIGNMENT 80 YS2-15b18.p1k chr13 218 40 378150 378327 C 179 82.68 1206 reject_low 21 ALIGNMENT 0 YS2-15b18.p1k chr07 856 219 567298 567297 C 638 0.00 1206 reject_low 14 ALIGNMENT 0 YS2-15b18.p1k chr03 222 856 85278 85277 F 635 0.00 1206 reject_low 9 ALIGNMENT 0 YS2-15b18.p1k chr16 856 219 856080 856079 C 638 0.00 1206 reject_low 24 ALIGNMENT 154 YS2-15b18.p1k chr14 221 46 567524 567700 C 176 96.59 1206 reject_low 12 ALIGNMENT 80 YS2-15b18.p1k chr12 218 40 220535 220712 C 179 82.68 1206 reject_low 20 ALIGNMENT 0 YS2-15b18.p1k chr12 222 856 941657 941656 F 635 0.00 1206 reject_low 8 ALIGNMENT 823 YS2-15b18.p1k chr14 1174 221 340021 340969 C 954 96.23 1206 accept 0 ALIGNMENT 991 YS2-15b19.q1k chr16 28 1198 95569 96737 F 1171 96.16 1200 accept 0 ALIGNMENT 0 YS2-15b19.q1k chr13 954 62 634471 634470 C 893 0.00 1200 reject_low 1 ALIGNMENT 97 YS2-15b19.q1k chr13 1153 955 634274 634470 C 199 84.92 1200 reject_low 1 ALIGNMENT 935 YS2-15b19.p1k chr16 1141 36 100009 101120 C 1106 96.38 1144 accept 0 ALIGNMENT 957 YS2-15b20.p1k chr16 38 1139 570017 571109 F 1102 97.19 1173 accept 0 ALIGNMENT 973 YS2-15b20.q1k chr16 1190 42 574549 575692 C 1149 96.17 1201 accept 0 ALIGNMENT 1029 YS2-15b21.p1k chr16 1111 36 402306 403378 C 1076 99.16 1111 accept 0 ALIGNMENT 904 YS2-15b21.q1k chr16 32 1076 398157 399193 F 1045 97.13 1219 accept 0 ALIGNMENT 465 YS2-15b23.q1k chr04 31 517 109844 110331 F 487 99.38 518 accept_chi 1 ALIGNMENT 0 YS2-15b23.p1k chr04 534 517 109845 109844 C 18 0.00 534 accept_chi 0 ALIGNMENT 465 YS2-15b23.p1k chr04 516 30 109844 110331 C 487 99.38 534 accept_chi 0 ALIGNMENT 0 YS2-15b24.q1k vc_5 344 62 37 36 C 283 0.00 383 reject_low 8 ALIGNMENT 42 YS2-15b24.q1k vc_1 383 341 2472 2514 C 43 100.00 383 reject_low 2 ALIGNMENT 42 YS2-15b24.q1k vc_2 383 341 2105 2147 C 43 100.00 383 reject_low 3 ALIGNMENT 0 YS2-15b24.q1k chr12 344 383 1000005 1000004 F 40 0.00 383 accept_chi 1 ALIGNMENT 0 YS2-15b24.q1k vc_1 340 62 2515 2514 C 279 0.00 383 reject_low 2 ALIGNMENT 39 YS2-15b24.q1k vc_5 383 345 5025 5063 C 39 100.00 383 reject_low 6 ALIGNMENT 42 YS2-15b24.q1k vc_3 383 341 2472 2514 C 43 100.00 383 reject_low 4 ALIGNMENT 36 YS2-15b24.q1k vc_5 380 345 1 36 C 36 100.00 383 reject_low 8 ALIGNMENT 290 YS2-15b24.p1k chr12 333 29 999700 1000005 C 305 98.69 352 accept_chi 0 ALIGNMENT 42 YS2-15b24.q1k vc_4 341 383 5829 5871 F 43 100.00 383 reject_low 5 ALIGNMENT 0 YS2-15b24.q1k vc_2 340 62 2148 2147 C 279 0.00 383 reject_low 3 ALIGNMENT 0 YS2-15b24.q1k vc_5 344 62 5064 5063 C 283 0.00 383 reject_low 6 ALIGNMENT 289 YS2-15b24.q1k chr12 38 343 999700 1000005 F 306 98.69 383 accept_chi 1 ALIGNMENT 38 YS2-15b24.q1k vc_7 346 383 13525 13562 F 38 100.00 383 reject_low 7 ALIGNMENT 0 YS2-15b24.q1k vc_7 62 345 13525 13524 F 284 0.00 383 reject_low 7 ALIGNMENT 0 YS2-15b24.q1k vc_4 62 340 5829 5828 F 279 0.00 383 reject_low 5 ALIGNMENT 0 YS2-15b24.q1k vc_3 340 62 2515 2514 C 279 0.00 383 reject_low 4 ALIGNMENT 0 YS2-15b24.p1k chr12 352 334 999701 999700 C 19 0.00 352 accept_chi 0 ALIGNMENT 944 YS2-15c01.q1k chr08 1193 35 379147 380311 C 1159 94.91 1269 accept 0 ALIGNMENT 1046 YS2-15c01.p1k chr08 36 1210 375439 376613 F 1175 96.94 1240 accept 0 ALIGNMENT 48 YS2-15c03.q1k vc_4 238 299 1548 1610 F 62 93.55 673 reject_vc 8 ALIGNMENT 278 YS2-15c03.q1k vc_3 1 299 2689 2988 F 299 97.99 673 reject_vc 6 ALIGNMENT 224 YS2-15c03.q1k vc_7 299 53 4925 5172 C 247 97.17 673|0,1 reject_vc 7 ALIGNMENT 278 YS2-15c03.q1k vc_2 1 299 2322 2621 F 299 97.99 673 reject_vc 5 ALIGNMENT 370 YS2-15c03.q1k vc_5 1 531 2556 3089 F 531 90.40 673 reject_vc 1 ALIGNMENT 48 YS2-15c03.q1k vc_4 299 238 50 112 C 62 93.55 673 reject_low 9 ALIGNMENT 88 YS2-15c03.q1k vc_4 306 531 1879 2105 F 226 80.53 673 reject_vc 8 ALIGNMENT 278 YS2-15c03.q1k vc_1 1 299 2689 2988 F 299 97.99 673 reject_vc 4 ALIGNMENT 0 YS2-15c03.q1k vc_4 300 305 1611 1878 F 6 0.00 673 reject_vc 8 ALIGNMENT 0 YS2-15c03.q1k vc_7 302 300 4700 4924 C 3 0.00 673 reject_vc 7 ALIGNMENT 333 YS2-15c03.q1k vc_4 413 1 5237 5654 C 413 93.95 673 reject_vc 3 ALIGNMENT 0 YS2-15c03.p1k chr07 489 471 825995 825994 C 19 0.00 489 accept 0 ALIGNMENT 0 YS2-15c03.q1k vc_7 53 54 5172 6360 C 0 0.00 673 reject_vc 7 ALIGNMENT 370 YS2-15c03.q1k vc_7 531 1 2036 2569 C 531 90.77 673 reject_vc 2 ALIGNMENT 61 YS2-15c03.q1k vc_7 413 303 4588 4699 C 111 86.49 673 reject_vc 7 ALIGNMENT 0 YS2-15c03.q1k vc_4 237 62 113 112 C 176 0.00 673 reject_low 9 ALIGNMENT 428 YS2-15c03.p1k chr07 470 31 825994 826434 C 440 99.77 489 accept 0 ALIGNMENT 0 YS2-15c03.q1k vc_4 62 237 1548 1547 F 176 0.00 673 reject_vc 8 ALIGNMENT 0 YS2-15c03.q1k vc_4 237 62 6340 6339 C 176 0.00 673 reject_low 10 ALIGNMENT 51 YS2-15c03.q1k vc_7 54 3 6360 6411 C 52 100.00 673|1,0 reject_vc 7 ALIGNMENT 48 YS2-15c03.q1k vc_4 299 238 6277 6339 C 62 93.55 673 reject_low 10 ALIGNMENT 1027 YS2-15c04.p1k chr11 32 1244 149139 150344 F 1213 96.21 1251 accept 0 ALIGNMENT 1007 YS2-15c04.q1k chr11 1269 33 153317 154550 C 1237 95.39 1353 accept 0 ALIGNMENT 0 YS2-15c05.p1k chr12 739 62 371813 371812 C 678 0.00 1298 reject_low 1 ALIGNMENT 0 YS2-15c05.q1k chr07 634 62 713598 713597 C 573 0.00 1324 accept 0 ALIGNMENT 0 YS2-15c05.p1k chr07 741 830 713597 713596 F 90 0.00 1298 accept 0 ALIGNMENT 0 YS2-15c05.q1k chr12 636 740 371812 371811 F 105 0.00 1324 reject_low 1 ALIGNMENT 296 YS2-15c05.q1k chr07 1101 635 713126 713597 C 467 90.36 1324 accept 0 ALIGNMENT 579 YS2-15c05.q1k chr12 37 635 371213 371812 F 599 99.67 1324 reject_low 1 ALIGNMENT 657 YS2-15c05.p1k chr07 27 740 712883 713597 F 714 99.44 1298 accept 0 ALIGNMENT 318 YS2-15c05.p1k chr12 1283 740 371257 371812 C 544 87.87 1298 reject_low 1 ALIGNMENT 948 YS2-15c06.q1k chr15 1121 36 611518 612607 C 1086 96.96 1310 accept 0 ALIGNMENT 1013 YS2-15c06.p1k chr15 29 1292 609204 610479 F 1264 94.86 1309 accept 0 ALIGNMENT 1024 YS2-15c07.p1k chr02 37 1181 740405 741561 F 1145 97.03 1294 accept 0 ALIGNMENT 961 YS2-15c07.q1k chr02 1130 38 743702 744805 C 1093 97.16 1340 accept 0 ALIGNMENT 888 YS2-15c09.q1k chr10 1052 32 282148 283165 C 1021 96.67 1276 accept 0 ALIGNMENT 917 YS2-15c09.p1k chr10 29 1086 278002 279045 F 1058 96.79 1248 accept 0 ALIGNMENT 941 YS2-15c10.p1k chr04 1150 29 983092 984226 C 1122 95.99 1176 ambiguous_trans 12 ALIGNMENT 953 YS2-15c10.p1k chr03 1150 29 86737 87871 C 1122 96.35 1176 ambiguous_trans 7 ALIGNMENT 307 YS2-15c10.p1k chr16 908 69 846608 847449 C 840 79.76 1176 ambiguous_trans 23 ALIGNMENT 312 YS2-15c10.p1k chr13 908 69 186364 187202 C 840 79.88 1176 ambiguous_trans 17 ALIGNMENT 950 YS2-15c10.p1k chr04 29 1150 516582 517716 F 1122 96.35 1176 ambiguous_trans 10 ALIGNMENT 970 YS2-15c10.p1k chr07 29 1150 571642 572777 F 1122 96.97 1176 ambiguous_trans 6 ALIGNMENT 980 YS2-15c10.p1k chr15 1150 29 972209 973343 C 1122 97.15 1176 ambiguous_trans 2 ALIGNMENT 950 YS2-15c10.p1k chr12 1150 29 943116 944250 C 1122 96.26 1176 ambiguous_trans 11 ALIGNMENT 953 YS2-15c10.p1k chr06 1150 29 139835 140969 C 1122 96.35 1176 ambiguous_trans 8 ALIGNMENT 309 YS2-15c10.p1k chr12 69 908 217968 218806 F 840 79.76 1176 ambiguous_trans_ua 21 ALIGNMENT 971 YS2-15c10.p1k chr04 1150 29 873743 874877 C 1122 96.88 1176 ambiguous_trans 5 ALIGNMENT 312 YS2-15c10.p1k chr02 908 69 223236 224074 C 840 79.88 1176 ambiguous_trans 15 ALIGNMENT 312 YS2-15c10.p1k chr13 908 69 198531 199369 C 840 79.88 1176 ambiguous_trans 18 ALIGNMENT 312 YS2-15c10.p1k chr16 69 908 807524 808362 F 840 79.88 1176 ambiguous_trans 20 ALIGNMENT 309 YS2-15c10.p1k chr12 69 908 478861 479699 F 840 79.76 1176 ambiguous_trans 22 ALIGNMENT 312 YS2-15c10.p1k chr10 908 69 480161 480999 C 840 79.88 1176 ambiguous_trans 16 ALIGNMENT 312 YS2-15c10.p1k chr15 908 69 597015 597853 C 840 79.88 1176 ambiguous_trans 19 ALIGNMENT 977 YS2-15c10.p1k chr14 29 1150 564931 566065 F 1122 97.15 1176 ambiguous_trans 4 ALIGNMENT 938 YS2-15c10.p1k chr02 1150 29 31568 32702 C 1122 95.90 1176 ambiguous_trans 13 ALIGNMENT 972 YS2-15c10.q1k chr12 1142 37 169356 170459 C 1106 97.29 1253 accept 0 ALIGNMENT 977 YS2-15c10.p1k chr12 29 1150 978635 979769 F 1122 97.15 1176 ambiguous_trans 3 ALIGNMENT 315 YS2-15c10.p1k chr10 908 69 474577 475415 C 840 80.00 1176 ambiguous_trans 14 ALIGNMENT 980 YS2-15c10.p1k chr15 29 1150 706962 708096 F 1122 97.24 1176 ambiguous_trans 1 ALIGNMENT 229 YS2-15c10.p1k chr16 69 736 853512 854179 F 668 78.89 1176 ambiguous_trans 24 ALIGNMENT 0 YS2-15c10.p1k chr16 737 826 854179 854178 F 90 0.00 1176 ambiguous_trans 24 ALIGNMENT 953 YS2-15c10.p1k chr07 1150 29 813379 814513 C 1122 96.35 1176 ambiguous_trans 9 ALIGNMENT 907 YS2-15c12.q1k chr09 38 1148 143706 144810 F 1111 96.13 1237 accept 0 ALIGNMENT 904 YS2-15c12.p1k chr09 1105 30 143818 144920 C 1076 96.56 1281 accept 0 ALIGNMENT 989 YS2-15c14.q1k chr07 1196 36 287477 288651 C 1161 96.47 1196 accept 0 ALIGNMENT 1052 YS2-15c14.p1k chr07 29 1250 284369 285602 F 1222 96.56 1311 accept 0 ALIGNMENT 1044 YS2-15c15.p1k chr14 1252 32 354219 355438 C 1221 95.99 1254 accept 0 ALIGNMENT 942 YS2-15c15.q1k chr14 47 1080 352235 353262 F 1034 98.65 1094 accept 0 ALIGNMENT 0 YS2-15c17.q1k chr07 196 62 678139 678138 C 135 0.00 1293 reject_low 1 ALIGNMENT 0 YS2-15c17.q1k chr07 748 238 678099 678098 C 511 0.00 1293 reject_low 1 ALIGNMENT 925 YS2-15c17.p1k chr07 1110 37 681606 682692 C 1074 96.74 1169 accept 0 ALIGNMENT 945 YS2-15c17.q1k chr07 44 1288 677958 679203 F 1245 93.33 1293 accept 0 ALIGNMENT 25 YS2-15c17.q1k chr07 237 197 678098 678138 C 41 87.80 1293 reject_low 1 ALIGNMENT 272 YS2-15c18.q1k vc_4 1180 652 5294 5812 C 529 85.26 1285 reject_low 3 ALIGNMENT 559 YS2-15c18.p1k chr06 618 31 89495 90081 C 588 99.49 637 accept_chi 0 ALIGNMENT 0 YS2-15c18.q1k vc_4 651 62 5813 5812 C 590 0.00 1285 reject_low 3 ALIGNMENT 0 YS2-15c18.q1k vc_7 651 62 2728 2727 C 590 0.00 1285 reject_low 7 ALIGNMENT 0 YS2-15c18.p1k chr06 637 619 89496 89495 C 19 0.00 637 accept_chi 0 ALIGNMENT 553 YS2-15c18.q1k chr06 26 611 89495 90081 F 586 99.15 1285 accept_chi 1 ALIGNMENT 0 YS2-15c18.q1k vc_4 62 611 5831 5830 F 550 0.00 1285 reject_low 9 ALIGNMENT 0 YS2-15c18.q1k vc_5 613 62 5064 5063 C 552 0.00 1285 reject_low 14 ALIGNMENT 0 YS2-15c18.q1k vc_5 62 651 2398 2397 F 590 0.00 1285 reject_low 2 ALIGNMENT 252 YS2-15c18.q1k vc_7 1065 652 2319 2727 C 414 87.92 1285 reject_low 7 ALIGNMENT 0 YS2-15c18.q1k vc_7 62 614 13525 13524 F 553 0.00 1285 reject_low 15 ALIGNMENT 260 YS2-15c18.q1k vc_1 652 1118 2531 2989 F 467 86.30 1285 reject_low 4 ALIGNMENT 0 YS2-15c18.q1k vc_4 62 651 126 125 F 590 0.00 1285 reject_low 8 ALIGNMENT 277 YS2-15c18.q1k vc_5 652 1180 2398 2914 F 529 85.44 1285 reject_low 2 ALIGNMENT 38 YS2-15c18.q1k vc_3 652 612 2472 2512 C 41 97.56 1285 reject_low 13 ALIGNMENT 0 YS2-15c18.q1k vc_4 653 652 5872 6353 F 0 0.00 1285 reject_low 9 ALIGNMENT 142 YS2-15c18.q1k vc_4 652 813 6353 6514 F 162 96.30 1285|1,0 reject_low 9 ALIGNMENT 260 YS2-15c18.q1k vc_2 652 1118 2164 2622 F 467 86.30 1285 reject_low 5 ALIGNMENT 0 YS2-15c18.q1k vc_5 613 62 37 36 C 552 0.00 1285 reject_low 16 ALIGNMENT 36 YS2-15c18.q1k vc_5 652 614 5025 5063 C 39 97.44 1285 reject_low 14 ALIGNMENT 0 YS2-15c18.q1k vc_4 651 62 1535 1534 C 590 0.00 1285 reject_low 10 ALIGNMENT 38 YS2-15c18.q1k vc_4 612 652 5831 5871 F 41 97.56 1285 reject_low 9 ALIGNMENT 0 YS2-15c18.q1k vc_3 62 651 2531 2530 F 590 0.00 1285 reject_low 6 ALIGNMENT 260 YS2-15c18.q1k vc_3 652 1118 2531 2989 F 467 86.30 1285 reject_low 6 ALIGNMENT 38 YS2-15c18.q1k vc_2 652 612 2105 2145 C 41 97.56 1285 reject_low 12 ALIGNMENT 0 YS2-15c18.q1k vc_1 611 62 2513 2512 C 550 0.00 1285 reject_low 11 ALIGNMENT 33 YS2-15c18.q1k vc_5 646 614 4 36 C 33 100.00 1285 reject_low 16 ALIGNMENT 35 YS2-15c18.q1k vc_7 615 652 13525 13562 F 38 97.37 1285 reject_low 15 ALIGNMENT 142 YS2-15c18.q1k vc_4 652 813 126 287 F 162 96.30 1285 reject_low 8 ALIGNMENT 0 YS2-15c18.q1k vc_1 62 651 2531 2530 F 590 0.00 1285 reject_low 4 ALIGNMENT 0 YS2-15c18.q1k vc_3 611 62 2513 2512 C 550 0.00 1285 reject_low 13 ALIGNMENT 0 YS2-15c18.q1k vc_2 62 651 2164 2163 F 590 0.00 1285 reject_low 5 ALIGNMENT 38 YS2-15c18.q1k vc_1 652 612 2472 2512 C 41 97.56 1285 reject_low 11 ALIGNMENT 0 YS2-15c18.q1k vc_2 611 62 2146 2145 C 550 0.00 1285 reject_low 12 ALIGNMENT 0 YS2-15c18.q1k chr06 612 635 90081 90080 F 24 0.00 1285 accept_chi 1 ALIGNMENT 78 YS2-15c18.q1k vc_4 740 652 1446 1534 C 89 96.63 1285 reject_low 10 ALIGNMENT 0 YS2-15c21.q1k chr15 62 402 506351 506350 F 341 0.00 1136 reject_low 1 ALIGNMENT 976 YS2-15c21.q1k chr14 1134 29 443093 444190 C 1106 97.83 1136 accept 0 ALIGNMENT 1038 YS2-15c21.p1k chr14 30 1196 439682 440846 F 1167 97.00 1196 accept 0 ALIGNMENT 277 YS2-15c21.q1k chr15 403 806 506351 506754 F 404 90.10 1136 reject_low 1 ALIGNMENT 0 YS2-15c21.q1k chr15 807 854 506754 506753 F 48 0.00 1136 reject_low 1 ALIGNMENT 729 YS2-15c22.q1k chr08 154 938 504475 505259 F 785 97.83 1135 reject_low 1 ALIGNMENT 0 YS2-15c22.q1k chr08 62 153 504475 504474 F 92 0.00 1135 reject_low 1 ALIGNMENT 994 YS2-15c22.p1k chr10 1205 39 705041 706202 C 1167 95.97 1205 accept 0 ALIGNMENT 968 YS2-15c22.q1k chr10 37 1080 701824 702863 F 1044 98.37 1135 accept 0 ALIGNMENT 936 YS2-15c23.q1k chr02 1068 41 178274 179288 C 1028 98.35 1086 accept 0 ALIGNMENT 845 YS2-15c23.p1k chr02 36 1010 174858 175817 F 975 97.23 1149 accept 0 ALIGNMENT 492 YS2-15c24.q1k chr15 699 10 189438 190128 C 690 91.30 1086 accept 0 ALIGNMENT 314 YS2-15c24.p1k chr15 57 638 185722 186288 F 582 87.29 1340 accept 0 ALIGNMENT 929 YS2-15d01.p1k chr08 30 1128 198353 199428 F 1099 96.91 1297 accept 0 ALIGNMENT 915 YS2-15d01.q1k chr08 1113 38 202711 203777 C 1076 96.47 1321 accept 0 ALIGNMENT 999 YS2-15d02.q1k chr06 1296 37 44836 46092 C 1260 94.21 1303 accept 0 ALIGNMENT 1011 YS2-15d02.p1k chr06 30 1235 42952 44162 F 1206 95.61 1236 accept 0 ALIGNMENT 0 YS2-15d03.p1k chr11 62 764 162486 162485 F 703 0.00 1251 reject_low 6 ALIGNMENT 87 YS2-15d03.p1k chr07 865 764 405449 405551 C 102 94.12 1251 reject_low 1 ALIGNMENT 0 YS2-15d03.p1k chr02 766 62 405948 405947 C 705 0.00 1251 reject_low 2 ALIGNMENT 0 YS2-15d03.p1k chr04 766 62 568955 568954 C 705 0.00 1251 reject_low 5 ALIGNMENT 83 YS2-15d03.p1k chr10 854 767 355278 355365 C 88 96.59 1251 reject_low 4 ALIGNMENT 0 YS2-15d03.p1k chr05 763 62 138745 138744 C 702 0.00 1251 reject_low 7 ALIGNMENT 0 YS2-15d03.p1k chr07 763 62 736424 736423 C 702 0.00 1251 reject_low 10 ALIGNMENT 974 YS2-15d03.q1k chr07 1223 40 831250 832446 C 1184 95.35 1326 accept 0 ALIGNMENT 81 YS2-15d03.p1k chr04 852 767 568869 568954 C 86 96.51 1251 reject_low 5 ALIGNMENT 74 YS2-15d03.p1k chr07 844 764 736343 736423 C 81 96.30 1251 reject_low 10 ALIGNMENT 0 YS2-15d03.p1k chr13 62 764 747885 747884 F 703 0.00 1251 reject_low 8 ALIGNMENT 87 YS2-15d03.p1k chr02 861 767 405853 405947 C 95 95.79 1251 reject_low 2 ALIGNMENT 1029 YS2-15d03.p1k chr07 29 1239 827986 829201 F 1211 96.28 1251 accept 0 ALIGNMENT 76 YS2-15d03.p1k chr13 765 844 747885 747964 F 80 97.50 1251 reject_low 8 ALIGNMENT 0 YS2-15d03.p1k chr10 62 766 374418 374417 F 705 0.00 1251 reject_low 3 ALIGNMENT 75 YS2-15d03.p1k chr05 842 764 138666 138744 C 79 97.47 1251 reject_low 7 ALIGNMENT 0 YS2-15d03.p1k chr10 766 62 355366 355365 C 705 0.00 1251 reject_low 4 ALIGNMENT 77 YS2-15d03.p1k chr13 767 844 131821 131898 F 78 98.72 1251 reject_low 9 ALIGNMENT 0 YS2-15d03.p1k chr13 62 766 131821 131820 F 705 0.00 1251 reject_low 9 ALIGNMENT 0 YS2-15d03.p1k chr07 763 62 405552 405551 C 702 0.00 1251 reject_low 1 ALIGNMENT 87 YS2-15d03.p1k chr10 767 861 374418 374512 F 95 95.79 1251 reject_low 3 ALIGNMENT 78 YS2-15d03.p1k chr11 765 853 162486 162574 F 89 94.38 1251 reject_low 6 ALIGNMENT 527 YS2-15d05.p1k vc_5 752 1 3929 4669 C 752 91.62 812 reject_vc 0 ALIGNMENT 0 YS2-15d05.p1k vc_1 552 62 9172 9171 C 491 0.00 812 reject_low 11 ALIGNMENT 518 YS2-15d05.p1k vc_7 1 752 13918 14658 F 752 91.09 812 reject_vc 6 ALIGNMENT 42 YS2-15d05.q1k vc_3 207 166 2472 2513 C 42 100.00 207 reject_vc 8 ALIGNMENT 0 YS2-15d05.q1k vc_5 168 62 37 36 C 107 0.00 207 reject_vc 15 ALIGNMENT 40 YS2-15d05.p1k vc_2 752 553 8616 8804 C 200 78.00 812 reject_low 12 ALIGNMENT 42 YS2-15d05.q1k vc_4 166 207 5830 5871 F 42 100.00 207 reject_vc 9 ALIGNMENT 0 YS2-15d05.q1k vc_7 62 169 13525 13524 F 108 0.00 207 reject_vc 14 ALIGNMENT 0 YS2-15d05.q1k vc_4 62 165 5830 5829 F 104 0.00 207 reject_vc 9 ALIGNMENT 36 YS2-15d05.q1k vc_5 204 169 1 36 C 36 100.00 207 reject_vc 15 ALIGNMENT 524 YS2-15d05.p1k vc_2 752 1 1009 1749 C 752 91.49 812 reject_vc 3 ALIGNMENT 524 YS2-15d05.p1k vc_3 752 1 1009 1749 C 752 91.49 812 reject_vc 4 ALIGNMENT 524 YS2-15d05.p1k vc_1 752 1 1009 1749 C 752 91.49 812 reject_vc 2 ALIGNMENT 527 YS2-15d05.p1k vc_6 1 752 3712 4452 F 752 91.49 812 reject_vc 1 ALIGNMENT 0 YS2-15d05.q1k vc_1 165 62 2514 2513 C 104 0.00 207 reject_vc 7 ALIGNMENT 0 YS2-15d05.p1k vc_2 552 62 8805 8804 C 491 0.00 812 reject_low 12 ALIGNMENT 0 YS2-15d05.p1k vc_3 552 62 8443 8442 C 491 0.00 812 reject_low 13 ALIGNMENT 42 YS2-15d05.q1k vc_1 207 166 2472 2513 C 42 100.00 207 reject_vc 7 ALIGNMENT 0 YS2-15d05.q1k vc_5 168 62 5064 5063 C 107 0.00 207 reject_vc 10 ALIGNMENT 40 YS2-15d05.p1k vc_3 752 553 8254 8442 C 200 78.00 812 reject_low 13 ALIGNMENT 0 YS2-15d05.q1k vc_3 165 62 2514 2513 C 104 0.00 207 reject_vc 8 ALIGNMENT 38 YS2-15d05.q1k vc_7 170 207 13525 13562 F 38 100.00 207 reject_vc 14 ALIGNMENT 40 YS2-15d05.p1k vc_1 752 553 8983 9171 C 200 78.00 812 reject_low 11 ALIGNMENT 518 YS2-15d05.p1k vc_7 1 752 456 1196 F 752 91.09 812 reject_vc 5 ALIGNMENT 39 YS2-15d05.q1k vc_5 207 169 5025 5063 C 39 100.00 207 reject_vc 10 ALIGNMENT 814 YS2-15d06.q1k scplasm1 1011 32 5279 6257 C 980 96.12 1386 accept 0 ALIGNMENT 592 YS2-15d06.p1k vc_6 473 1158 5263 5950 F 686 97.23 1317 reject_low 2 ALIGNMENT 647 YS2-15d06.q1k vc_6 720 32 5263 5950 C 689 99.27 1386 reject_low 1 ALIGNMENT 0 YS2-15d06.p1k vc_6 62 472 5263 5262 F 411 0.00 1317 reject_low 2 ALIGNMENT 1022 YS2-15d06.p1k scplasm1 31 1158 5128 6257 F 1128 98.23 1317 accept 0 ALIGNMENT 996 YS2-15d07.p1k chr04 30 1213 41613 42812 F 1184 95.61 1284 accept 0 ALIGNMENT 998 YS2-15d08.q1k chr14 39 1228 315123 316325 F 1190 95.97 1362 accept 0 ALIGNMENT 1038 YS2-15d08.p1k chr14 1241 33 319334 320547 C 1209 96.69 1318 accept 0 ALIGNMENT 834 YS2-15d09.q1k chr16 1063 37 667013 668027 C 1027 95.23 1380 accept 0 ALIGNMENT 0 YS2-15d10.p1k chr13 470 816 588667 588666 F 347 0.00 1216 reject_low 11 ALIGNMENT 25 YS2-15d10.p1k chr14 442 407 604231 604266 C 36 97.22 1216 reject_low 17 ALIGNMENT 0 YS2-15d10.q1k chr07 749 133 440721 440720 C 617 0.00 1264 reject_low 7 ALIGNMENT 0 YS2-15d10.p1k chr14 406 62 604267 604266 C 345 0.00 1216 reject_low 17 ALIGNMENT 0 YS2-15d10.q1k chr06 749 142 157901 157900 C 608 0.00 1264 reject_low 2 ALIGNMENT 0 YS2-15d10.q1k chr02 141 749 36494 36493 F 609 0.00 1264 reject_low 4 ALIGNMENT 0 YS2-15d10.p1k chr09 465 816 169501 169500 F 352 0.00 1216 reject_low 14 ALIGNMENT 0 YS2-15d10.p1k chr14 458 816 720316 720315 F 359 0.00 1216 reject_low 18 ALIGNMENT 27 YS2-15d10.p1k chr02 445 402 505199 505242 C 44 95.45 1216 reject_low 13 ALIGNMENT 0 YS2-15d10.p1k chr02 400 62 72408 72407 C 339 0.00 1216 reject_low 15 ALIGNMENT 87 YS2-15d10.q1k chr16 150 40 560175 560287 C 111 93.69 1264 reject_low 1 ALIGNMENT 0 YS2-15d10.p1k chr14 816 443 604232 604231 C 374 0.00 1216 reject_low 17 ALIGNMENT 0 YS2-15d10.p1k chr13 62 401 588600 588599 F 340 0.00 1216 reject_low 11 ALIGNMENT 81 YS2-15d10.q1k chr14 39 131 374869 374961 F 93 95.70 1264 reject_low 8 ALIGNMENT 0 YS2-15d10.p1k chr02 401 62 505243 505242 C 340 0.00 1216 reject_low 13 ALIGNMENT 92 YS2-15d10.q1k chr06 141 39 157900 158003 C 103 97.09 1264 reject_low 2 ALIGNMENT 75 YS2-15d10.q1k chr04 143 40 1095353 1095457 C 104 91.35 1264 reject_low 9 ALIGNMENT 27 YS2-15d10.p1k chr02 470 413 780409 780466 C 58 89.66 1216 reject_low 12 ALIGNMENT 0 YS2-15d10.q1k chr16 749 142 622528 622527 C 608 0.00 1264 reject_low 3 ALIGNMENT 935 YS2-15d10.p1k chr13 1106 30 353906 354977 C 1077 96.75 1216 accept 0 ALIGNMENT 0 YS2-15d10.q1k chr16 749 151 560176 560175 C 599 0.00 1264 reject_low 1 ALIGNMENT 0 YS2-15d10.p1k chr09 62 413 169451 169450 F 352 0.00 1216 reject_low 14 ALIGNMENT 27 YS2-15d10.p1k chr09 414 464 169451 169501 F 51 92.16 1216 reject_low 14 ALIGNMENT 29 YS2-15d10.p1k chr13 402 469 588600 588667 F 68 89.71 1216 reject_low 11 ALIGNMENT 917 YS2-15d10.q1k chr13 31 1131 352268 353355 F 1101 95.64 1264 accept 0 ALIGNMENT 0 YS2-15d10.q1k chr14 132 749 374961 374960 F 618 0.00 1264 reject_low 8 ALIGNMENT 89 YS2-15d10.q1k chr02 39 140 36393 36494 F 102 96.08 1264 reject_low 4 ALIGNMENT 0 YS2-15d10.p1k chr02 407 62 780406 780405 C 346 0.00 1216 reject_low 10 ALIGNMENT 23 YS2-15d10.p1k chr02 465 401 72343 72407 C 65 87.69 1216 reject_low 15 ALIGNMENT 22 YS2-15d10.p1k chr15 463 400 236960 237023 C 64 87.50 1216 reject_low 16 ALIGNMENT 85 YS2-15d10.q1k chr07 132 41 440720 440812 C 92 97.83 1264 reject_low 7 ALIGNMENT 22 YS2-15d10.p1k chr14 414 457 720273 720316 F 44 90.91 1216 reject_low 18 ALIGNMENT 0 YS2-15d10.p1k chr15 399 62 237024 237023 C 338 0.00 1216 reject_low 16 ALIGNMENT 0 YS2-15d10.p1k chr02 816 479 780336 780335 C 338 0.00 1216 reject_low 10 ALIGNMENT 31 YS2-15d10.p1k chr02 478 408 780335 780405 C 71 88.73 1216 reject_low 10 ALIGNMENT 0 YS2-15d10.q1k chr04 749 144 1095354 1095353 C 606 0.00 1264 reject_low 9 ALIGNMENT 0 YS2-15d10.p1k chr14 62 413 720273 720272 F 352 0.00 1216 reject_low 18 ALIGNMENT 88 YS2-15d10.q1k chr08 133 39 237848 237943 C 95 97.89 1264 reject_low 6 ALIGNMENT 0 YS2-15d10.q1k chr08 749 142 358473 358472 C 608 0.00 1264 reject_low 5 ALIGNMENT 0 YS2-15d10.p1k chr15 816 464 236961 236960 C 353 0.00 1216 reject_low 16 ALIGNMENT 87 YS2-15d10.q1k chr08 141 39 358472 358574 C 103 96.12 1264 reject_low 5 ALIGNMENT 0 YS2-15d10.p1k chr02 816 446 505200 505199 C 371 0.00 1216 reject_low 13 ALIGNMENT 0 YS2-15d10.p1k chr02 816 471 780410 780409 C 346 0.00 1216 reject_low 12 ALIGNMENT 0 YS2-15d10.q1k chr08 749 134 237849 237848 C 616 0.00 1264 reject_low 6 ALIGNMENT 90 YS2-15d10.q1k chr16 141 41 622527 622628 C 101 97.03 1264 reject_low 3 ALIGNMENT 0 YS2-15d10.p1k chr02 412 62 780467 780466 C 351 0.00 1216 reject_low 12 ALIGNMENT 0 YS2-15d10.p1k chr02 816 466 72344 72343 C 351 0.00 1216 reject_low 15 ALIGNMENT 237 YS2-15d11.p1k vc_7 799 1187 100 502 F 389 88.43 1315 reject_low 3 ALIGNMENT 0 YS2-15d11.q1k vc_1 62 816 2531 2530 F 755 0.00 1240 reject_low 9 ALIGNMENT 237 YS2-15d11.p1k vc_7 799 1187 13562 13964 F 389 88.43 1315 reject_low 7 ALIGNMENT 0 YS2-15d11.q1k vc_4 816 62 5813 5812 C 755 0.00 1240 reject_low 12 ALIGNMENT 0 YS2-15d11.q1k vc_1 776 62 2513 2512 C 715 0.00 1240 reject_low 16 ALIGNMENT 0 YS2-15d11.p1k vc_5 798 62 5026 5025 C 737 0.00 1315 reject_low 2 ALIGNMENT 0 YS2-15d11.q1k vc_2 776 62 2146 2145 C 715 0.00 1240 reject_low 17 ALIGNMENT 0 YS2-15d11.q1k vc_5 778 62 5064 5063 C 717 0.00 1240 reject_low 19 ALIGNMENT 237 YS2-15d11.p1k vc_1 1187 799 1703 2105 C 389 88.43 1315 reject_low 4 ALIGNMENT 41 YS2-15d11.q1k vc_2 817 777 2105 2145 C 41 100.00 1240 reject_low 17 ALIGNMENT 97 YS2-15d11.q1k vc_3 817 1029 2531 2732 F 213 86.38 1240 reject_low 11 ALIGNMENT 39 YS2-15d11.q1k vc_5 817 779 5025 5063 C 39 100.00 1240 reject_low 19 ALIGNMENT 97 YS2-15d11.q1k vc_1 817 1029 2531 2732 F 213 86.38 1240 reject_low 9 ALIGNMENT 0 YS2-15d11.p1k vc_7 62 798 13562 13561 F 737 0.00 1315 reject_low 7 ALIGNMENT 0 YS2-15d11.q1k vc_7 816 62 2728 2727 C 755 0.00 1240 reject_low 3 ALIGNMENT 41 YS2-15d11.q1k vc_1 817 777 2472 2512 C 41 100.00 1240 reject_low 16 ALIGNMENT 26 YS2-15d11.p1k vc_1 829 799 2441 2472 C 31 96.77 1315 reject_low 22 ALIGNMENT 0 YS2-15d11.p1k vc_3 798 62 2473 2472 C 737 0.00 1315 reject_low 23 ALIGNMENT 97 YS2-15d11.q1k vc_5 817 1029 2398 2599 F 213 86.38 1240 reject_low 2 ALIGNMENT 0 YS2-15d11.p1k vc_2 798 62 2106 2105 C 737 0.00 1315 reject_low 5 ALIGNMENT 0 YS2-15d11.p1k vc_7 62 798 100 99 F 737 0.00 1315 reject_low 3 ALIGNMENT 61 YS2-15d11.q1k vc_4 902 817 1449 1534 C 86 91.86 1240 reject_low 15 ALIGNMENT 0 YS2-15d11.p1k vc_3 798 62 2106 2105 C 737 0.00 1315 reject_low 6 ALIGNMENT 97 YS2-15d11.q1k vc_7 1029 817 2526 2727 C 213 86.38 1240 reject_low 3 ALIGNMENT 237 YS2-15d11.p1k vc_5 1187 799 4623 5025 C 389 88.43 1315 reject_low 2 ALIGNMENT 41 YS2-15d11.q1k vc_4 777 817 5831 5871 F 41 100.00 1240 reject_low 14 ALIGNMENT 0 YS2-15d11.q1k vc_4 62 816 126 125 F 755 0.00 1240 reject_low 13 ALIGNMENT 0 YS2-15d11.q1k vc_3 62 816 2531 2530 F 755 0.00 1240 reject_low 11 ALIGNMENT 0 YS2-15d11.q1k vc_4 816 62 1535 1534 C 755 0.00 1240 reject_low 15 ALIGNMENT 675 YS2-15d11.p1k chr02 780 31 60973 61720 C 750 97.73 1315 accept_chi 0 ALIGNMENT 0 YS2-15d11.q1k vc_4 62 776 5831 5830 F 715 0.00 1240 reject_low 14 ALIGNMENT 0 YS2-15d11.q1k vc_5 778 62 37 36 C 717 0.00 1240 reject_low 21 ALIGNMENT 0 YS2-15d11.q1k vc_5 62 816 2398 2397 F 755 0.00 1240 reject_low 2 ALIGNMENT 0 YS2-15d11.q1k vc_7 62 779 13525 13524 F 718 0.00 1240 reject_low 20 ALIGNMENT 0 YS2-15d11.q1k vc_3 776 62 2513 2512 C 715 0.00 1240 reject_low 18 ALIGNMENT 38 YS2-15d11.q1k vc_7 780 817 13525 13562 F 38 100.00 1240 reject_low 20 ALIGNMENT 0 YS2-15d11.q1k vc_4 818 817 5872 6353 F 0 0.00 1240 reject_low 14 ALIGNMENT 0 YS2-15d11.p1k chr02 820 781 60974 60973 C 40 0.00 1315 accept_chi 0 ALIGNMENT 89 YS2-15d11.q1k vc_4 817 983 126 287 F 167 87.43 1240 reject_low 13 ALIGNMENT 26 YS2-15d11.p1k vc_3 829 799 2441 2472 C 31 96.77 1315 reject_low 23 ALIGNMENT 0 YS2-15d11.p1k vc_1 798 62 2473 2472 C 737 0.00 1315 reject_low 22 ALIGNMENT 237 YS2-15d11.p1k vc_3 1187 799 1703 2105 C 389 88.43 1315 reject_low 6 ALIGNMENT 89 YS2-15d11.q1k vc_4 817 983 6353 6514 F 167 87.43 1240|1,0 reject_low 14 ALIGNMENT 0 YS2-15d11.p1k vc_4 62 798 5871 5870 F 737 0.00 1315 reject_low 8 ALIGNMENT 97 YS2-15d11.q1k vc_2 817 1029 2164 2365 F 213 86.38 1240 reject_low 10 ALIGNMENT 41 YS2-15d11.q1k vc_3 817 777 2472 2512 C 41 100.00 1240 reject_low 18 ALIGNMENT 231 YS2-15d11.p1k vc_4 799 1114 5871 6190 F 316 91.77 1315 reject_low 8 ALIGNMENT 237 YS2-15d11.p1k vc_2 1187 799 1703 2105 C 389 88.43 1315 reject_low 5 ALIGNMENT 0 YS2-15d11.q1k vc_2 62 816 2164 2163 F 755 0.00 1240 reject_low 10 ALIGNMENT 36 YS2-15d11.q1k vc_5 814 779 1 36 C 36 100.00 1240 reject_low 21 ALIGNMENT 667 YS2-15d11.q1k chr02 26 776 60973 61720 F 751 97.47 1240 accept_chi 1 ALIGNMENT 0 YS2-15d11.p1k vc_1 798 62 2106 2105 C 737 0.00 1315 reject_low 4 ALIGNMENT 97 YS2-15d11.q1k vc_4 1029 817 5611 5812 C 213 86.38 1240 reject_low 12 ALIGNMENT 1017 YS2-15d12.q1k chr08 1198 33 165675 166843 C 1166 96.66 1198 accept 0 ALIGNMENT 1027 YS2-15d12.p1k chr08 29 1278 162715 163988 F 1250 95.20 1325 accept 0 ALIGNMENT 942 YS2-15d13.p1k chr13 1172 33 770563 771728 C 1140 95.35 1293 accept 0 ALIGNMENT 761 YS2-15d14.q1k chr05 975 6 183445 184412 C 970 94.54 1166 accept 0 ALIGNMENT 989 YS2-15d15.q1k chr09 1097 38 97253 98309 C 1060 98.40 1098 accept 0 ALIGNMENT 1035 YS2-15d15.p1k chr09 34 1221 96385 97572 F 1188 96.80 1252 accept 0 ALIGNMENT 967 YS2-15d16.p1k chr07 32 1167 633769 634921 F 1136 96.83 1235 accept 0 ALIGNMENT 405 YS2-15d16.q1k chr07 543 38 635811 636312 C 506 94.07 1111 accept 0 ALIGNMENT 945 YS2-15d17.p1k chr07 1207 37 954791 955950 C 1171 95.13 1209 accept 0 ALIGNMENT 990 YS2-15d17.q1k chr07 39 1203 953210 954379 F 1165 95.97 1275 accept 0 ALIGNMENT 1006 YS2-15d18.q1k chr10 1262 36 563110 564348 C 1227 95.03 1271 accept 0 ALIGNMENT 1012 YS2-15d18.p1k chr10 32 1192 562323 563486 F 1161 96.73 1192 accept 0 ALIGNMENT 0 YS2-15d19.p1k chr04 531 549 1167905 1167904 F 19 0.00 549 accept 0 ALIGNMENT 479 YS2-15d19.p1k chr04 30 530 1167403 1167905 F 501 99.60 549 accept 0 ALIGNMENT 324 YS2-15d20.q1k chr12 368 36 463873 464205 C 333 100.00 408 accept 0 ALIGNMENT 0 YS2-15d20.q1k chr12 408 369 454737 454736 C 40 0.00 408 reject_low 1 ALIGNMENT 308 YS2-15d20.p1k chr12 28 358 454736 455068 F 331 98.79 377 accept 0 ALIGNMENT 36 YS2-15d20.q1k vc_5 405 370 1 36 C 36 100.00 408 reject_low 8 ALIGNMENT 0 YS2-15d20.q1k vc_3 368 62 2512 2511 C 307 0.00 408 reject_low 4 ALIGNMENT 0 YS2-15d20.q1k chr12 408 369 463874 463873 C 40 0.00 408 accept 0 ALIGNMENT 308 YS2-15d20.p1k chr12 28 358 463873 464205 F 331 98.79 377 reject_low 2 ALIGNMENT 38 YS2-15d20.q1k vc_7 371 408 13525 13562 F 38 100.00 408 reject_low 7 ALIGNMENT 40 YS2-15d20.q1k vc_1 408 369 2472 2511 C 40 100.00 408 reject_low 3 ALIGNMENT 0 YS2-15d20.q1k vc_4 62 368 5832 5831 F 307 0.00 408 reject_low 5 ALIGNMENT 39 YS2-15d20.q1k vc_5 408 370 5025 5063 C 39 100.00 408 reject_low 6 ALIGNMENT 0 YS2-15d20.q1k vc_7 62 370 13525 13524 F 309 0.00 408 reject_low 7 ALIGNMENT 0 YS2-15d20.q1k vc_5 369 62 37 36 C 308 0.00 408 reject_low 8 ALIGNMENT 40 YS2-15d20.q1k vc_3 408 369 2472 2511 C 40 100.00 408 reject_low 4 ALIGNMENT 0 YS2-15d20.q1k vc_5 369 62 5064 5063 C 308 0.00 408 reject_low 6 ALIGNMENT 40 YS2-15d20.q1k vc_4 369 408 5832 5871 F 40 100.00 408 reject_low 5 ALIGNMENT 0 YS2-15d20.q1k vc_1 368 62 2512 2511 C 307 0.00 408 reject_low 3 ALIGNMENT 0 YS2-15d20.p1k chr12 359 377 464205 464204 F 19 0.00 377 reject_low 2 ALIGNMENT 0 YS2-15d20.p1k chr12 359 377 455068 455067 F 19 0.00 377 accept 0 ALIGNMENT 324 YS2-15d20.q1k chr12 368 36 454736 455068 C 333 100.00 408 reject_low 1 ALIGNMENT 943 YS2-15d21.p1k chr11 32 1206 593975 595142 F 1175 95.66 1206 accept 0 ALIGNMENT 892 YS2-15d21.q1k chr11 1068 26 597343 598373 C 1043 96.74 1153 accept 0 ALIGNMENT 1017 YS2-15d22.p1k chr09 1177 30 421861 423005 C 1148 96.78 1202 accept 0 ALIGNMENT 948 YS2-15d22.q1k chr09 33 1092 420907 421955 F 1060 97.55 1148 accept 0 ALIGNMENT 0 YS2-15d24.q1k chr06 62 741 2 1 F 680 0.00 1076 reject_low 18 ALIGNMENT 821 YS2-15d24.q1k chr08 46 1055 59 1070 F 1010 95.25 1076 reject_low 11 ALIGNMENT 0 YS2-15d24.q1k chr05 62 169 2 1 F 108 0.00 1076 reject_low 15 ALIGNMENT 0 YS2-15d24.q1k chr07 82 62 1090947 1090946 C 21 0.00 1076 ambiguous_tel 4 ALIGNMENT 0 YS2-15d24.q1k chr12 152 62 1078175 1078174 C 91 0.00 1076 reject_low 6 ALIGNMENT 611 YS2-15d24.p1k chr13 695 33 3887 4547 C 663 98.04 1248 reject_low 12 ALIGNMENT 0 YS2-15d24.p1k chr16 696 741 944166 944165 F 46 0.00 1248 reject_low 13 ALIGNMENT 611 YS2-15d24.p1k chr12 695 33 9546 10206 C 663 98.04 1248 reject_low 16 ALIGNMENT 627 YS2-15d24.p1k chr12 33 900 1066090 1066917 F 868 93.09 1248 reject_low 9 ALIGNMENT 831 YS2-15d24.q1k chr15 1055 46 1090234 1091244 C 1010 95.54 1076 ambiguous_tel 2 ALIGNMENT 611 YS2-15d24.p1k chr12 695 33 4011 4671 C 663 98.04 1248 reject_low 14 ALIGNMENT 705 YS2-15d24.q1k chr04 1055 220 1531069 1531908 C 836 96.05 1076 reject_low 8 ALIGNMENT 0 YS2-15d24.q1k chr16 62 153 2 1 F 92 0.00 1076 reject_low 5 ALIGNMENT 0 YS2-15d24.p1k chr12 741 696 9547 9546 C 46 0.00 1248 reject_low 16 ALIGNMENT 807 YS2-15d24.q1k chr05 1055 83 575898 576869 C 973 95.68 1076 reject_low 7 ALIGNMENT 825 YS2-15d24.q1k chr16 1055 67 947075 948062 C 989 95.85 1076 reject_low 13 ALIGNMENT 764 YS2-15d24.p1k chr14 900 33 4762 5621 C 868 97.00 1248 ambiguous_tel 3 ALIGNMENT 883 YS2-15d24.q1k chr10 46 1055 87 1088 F 1010 97.23 1076 ambiguous_tel 1 ALIGNMENT 819 YS2-15d24.q1k chr13 46 1055 76 1086 F 1010 95.15 1076 reject_low 12 ALIGNMENT 0 YS2-15d24.p1k chr12 741 696 4012 4011 C 46 0.00 1248 reject_low 14 ALIGNMENT 619 YS2-15d24.p1k chr16 33 695 943505 944166 F 663 98.34 1248 reject_low 13 ALIGNMENT 740 YS2-15d24.q1k chr12 1055 153 1077270 1078174 C 903 95.35 1076 reject_low 6 ALIGNMENT 0 YS2-15d24.q1k chr02 62 153 2 1 F 92 0.00 1076 reject_low 17 ALIGNMENT 617 YS2-15d24.p1k chr08 695 33 3743 4403 C 663 98.34 1248 reject_low 11 ALIGNMENT 623 YS2-15d24.p1k chr02 695 33 4212 4872 C 663 98.64 1248 reject_low 17 ALIGNMENT 764 YS2-15d24.p1k chr09 900 33 5151 6010 C 868 97.00 1248 ambiguous_tel 0 ALIGNMENT 0 YS2-15d24.p1k chr08 741 696 3744 3743 C 46 0.00 1248 reject_low 11 ALIGNMENT 554 YS2-15d24.p1k chr05 900 33 4766 5576 C 868 91.01 1248 reject_low 15 ALIGNMENT 724 YS2-15d24.q1k chr02 154 1055 2 905 F 902 94.79 1076 reject_low 17 ALIGNMENT 0 YS2-15d24.p1k chr06 741 694 3051 3050 C 48 0.00 1248 reject_low 18 ALIGNMENT 746 YS2-15d24.q1k chr16 154 1055 2 902 F 902 95.57 1076 reject_low 5 ALIGNMENT 752 YS2-15d24.p1k chr04 33 900 1526441 1527300 F 868 96.54 1248 reject_low 8 ALIGNMENT 752 YS2-15d24.p1k chr12 33 900 1072642 1073501 F 868 96.54 1248 reject_low 6 ALIGNMENT 614 YS2-15d24.p1k chr06 693 33 3050 3709 C 661 98.18 1248 reject_low 18 ALIGNMENT 831 YS2-15d24.q1k chr12 1055 46 1070607 1071617 C 1010 95.54 1076 reject_low 9 ALIGNMENT 263 YS2-15d24.q1k chr06 742 1055 2 312 F 314 95.86 1076 reject_low 18 ALIGNMENT 771 YS2-15d24.q1k chr12 46 1055 5749 6745 F 1010 94.06 1076 reject_low 16 ALIGNMENT 819 YS2-15d24.q1k chr08 1055 46 561422 562432 C 1010 95.15 1076 reject_low 10 ALIGNMENT 883 YS2-15d24.q1k chr09 46 1055 104 1105 F 1010 97.23 1076 ambiguous_tel 0 ALIGNMENT 0 YS2-15d24.p1k chr13 741 696 3888 3887 C 46 0.00 1248 reject_low 12 ALIGNMENT 0 YS2-15d24.p1k chr08 696 741 558619 558618 F 46 0.00 1248 reject_low 10 ALIGNMENT 733 YS2-15d24.q1k chr05 170 1055 2 889 F 886 95.60 1076 reject_low 15 ALIGNMENT 764 YS2-15d24.p1k chr10 900 33 5134 5993 C 868 97.00 1248 ambiguous_tel 1 ALIGNMENT 752 YS2-15d24.p1k chr15 33 900 1085606 1086465 F 868 96.54 1248 ambiguous_tel 2 ALIGNMENT 826 YS2-15d24.q1k chr14 64 1055 3 993 F 992 95.77 1076 ambiguous_tel 3 ALIGNMENT 764 YS2-15d24.p1k chr16 900 33 4671 5530 C 868 97.00 1248 reject_low 5 ALIGNMENT 675 YS2-15d24.p1k chr05 33 900 571287 572129 F 868 94.35 1248 reject_low 7 ALIGNMENT 623 YS2-15d24.p1k chr08 33 695 557959 558619 F 663 98.64 1248 reject_low 10 ALIGNMENT 0 YS2-15d24.q1k chr04 219 62 1531909 1531908 C 158 0.00 1076 reject_low 8 ALIGNMENT 0 YS2-15d24.q1k chr05 82 62 576870 576869 C 21 0.00 1076 reject_low 7 ALIGNMENT 0 YS2-15d24.p1k chr02 741 696 4213 4212 C 46 0.00 1248 reject_low 17 ALIGNMENT 764 YS2-15d24.p1k chr07 33 900 1085347 1086206 F 868 97.00 1248 ambiguous_tel 4 ALIGNMENT 807 YS2-15d24.q1k chr07 1055 83 1089975 1090946 C 973 95.68 1076 ambiguous_tel 4 ALIGNMENT 789 YS2-15d24.q1k chr12 46 1055 100 1102 F 1010 94.55 1076 reject_low 14 ALIGNMENT 992 YS2-15e01.p1k chr04 29 1182 494803 495955 F 1154 96.45 1221 accept 0 ALIGNMENT 762 YS2-15e01.q1k chr04 944 9 498391 499330 C 936 94.87 1240 accept 0 ALIGNMENT 304 YS2-15e02.q1k chr04 124 637 87170 87667 F 514 88.91 1640 accept 0 ALIGNMENT 974 YS2-15e02.p1k chr04 1210 33 89544 90718 C 1178 95.93 1222 accept 0 ALIGNMENT 446 YS2-15e03.q1k chr02 1049 48 427690 428695 C 1002 81.84 1312 reject_low 3 ALIGNMENT 123 YS2-15e03.p1k chr12 280 35 1002510 1002755 C 246 83.74 1299 reject_low 4 ALIGNMENT 988 YS2-15e03.q1k chr01 37 1097 225839 226904 F 1061 98.30 1312 reject_low 1 ALIGNMENT 0 YS2-15e03.p1k chr12 404 281 1002363 1002509 C 124 0.00 1299 reject_low 4 ALIGNMENT 999 YS2-15e03.p1k chr08 1223 33 553401 554600 C 1191 95.97 1299 accept 0 ALIGNMENT 0 YS2-15e03.p1k chr12 905 447 1002321 1002320 C 459 0.00 1299 reject_low 4 ALIGNMENT 28 YS2-15e03.p1k chr12 446 405 1002320 1002362 C 42 90.48 1299 reject_low 4 ALIGNMENT 535 YS2-15e03.p1k chr01 934 33 227051 227937 C 902 88.47 1299 reject_low 1 ALIGNMENT 1023 YS2-15e03.q1k chr08 37 1188 552487 553652 F 1152 96.88 1312 accept 0 ALIGNMENT 514 YS2-15e03.q1k chr02 1011 37 429579 430557 C 975 84.62 1312 reject_low 2 ALIGNMENT 94 YS2-15e04.p1k chr06 663 770 31622 31729 F 108 98.15 1344 reject_low 3 ALIGNMENT 128 YS2-15e04.p1k chr12 403 270 489348 489481 C 134 98.51 1344 reject_low 2 ALIGNMENT 119 YS2-15e04.p1k chr12 403 285 472464 472582 C 119 100.00 1344 reject_low 4 ALIGNMENT 729 YS2-15e04.p1k chr12 1266 285 467968 468930 C 982 93.48 1344 reject_low 1 ALIGNMENT 0 YS2-15e04.p1k chr12 800 404 485697 485696 C 397 0.00 1344 reject_low 6 ALIGNMENT 1015 YS2-15e04.q1k chr12 54 1234 463619 464821 F 1181 96.27 1327 reject_low 1 ALIGNMENT 0 YS2-15e04.p1k chr12 269 62 489482 489481 C 208 0.00 1344 reject_low 2 ALIGNMENT 915 YS2-15e04.p1k chr12 1266 41 458831 460049 C 1226 93.64 1344 accept 0 ALIGNMENT 0 YS2-15e04.p1k chr06 771 800 31729 31728 F 30 0.00 1344 reject_low 3 ALIGNMENT 119 YS2-15e04.p1k chr12 403 285 485696 485814 C 119 100.00 1344 reject_low 6 ALIGNMENT 0 YS2-15e04.p1k chr12 800 404 472465 472464 C 397 0.00 1344 reject_low 4 ALIGNMENT 0 YS2-15e04.p1k chr12 284 62 472583 472582 C 223 0.00 1344 reject_low 4 ALIGNMENT 119 YS2-15e04.p1k chr12 403 285 482044 482162 C 119 100.00 1344 reject_low 5 ALIGNMENT 0 YS2-15e04.p1k chr12 284 62 482163 482162 C 223 0.00 1344 reject_low 5 ALIGNMENT 0 YS2-15e04.p1k chr12 800 404 489349 489348 C 397 0.00 1344 reject_low 2 ALIGNMENT 0 YS2-15e04.p1k chr06 62 662 31622 31621 F 601 0.00 1344 reject_low 3 ALIGNMENT 1015 YS2-15e04.q1k chr12 54 1234 454482 455684 F 1181 96.27 1327 accept 0 ALIGNMENT 0 YS2-15e04.p1k chr12 284 62 468931 468930 C 223 0.00 1344 reject_low 1 ALIGNMENT 0 YS2-15e04.p1k chr12 284 62 485815 485814 C 223 0.00 1344 reject_low 6 ALIGNMENT 0 YS2-15e04.p1k chr12 800 404 482045 482044 C 397 0.00 1344 reject_low 5 ALIGNMENT 20 YS2-15e05.p1k chr03 146 104 247922 247964 C 43 90.70 1282 reject_low 1 ALIGNMENT 0 YS2-15e05.p1k chr03 856 147 247923 247922 C 710 0.00 1282 reject_low 1 ALIGNMENT 0 YS2-15e05.p1k chr03 103 62 247965 247964 C 42 0.00 1282 reject_low 1 ALIGNMENT 910 YS2-15e05.p1k chr06 45 1261 107743 108937 F 1217 93.59 1282 accept 0 ALIGNMENT 964 YS2-15e05.q1k chr06 1184 30 109061 110208 C 1155 96.10 1241 accept 0 ALIGNMENT 0 YS2-15e06.p1k chr12 212 780 489772 489771 F 569 0.00 1464 reject_low 2 ALIGNMENT 54 YS2-15e06.p1k chr12 781 963 489772 489949 F 183 80.33 1464 reject_low 2 ALIGNMENT 225 YS2-15e06.p1k chr12 409 963 451419 451981 F 555 82.88 1464 reject_low 1 ALIGNMENT 357 YS2-15e06.q1k chr12 980 4 463487 464461 C 977 80.86 1335 accept 0 ALIGNMENT 396 YS2-15e06.p1k chr12 161 963 460299 461118 F 803 85.43 1464 accept 0 ALIGNMENT 357 YS2-15e06.q1k chr12 980 4 454350 455324 C 977 80.86 1335 reject_low 1 ALIGNMENT 0 YS2-15e06.p1k chr12 212 408 451419 451418 F 197 0.00 1464 reject_low 1 ALIGNMENT 0 YS2-15e07.q1k vc_4 62 338 5831 5830 F 277 0.00 379 reject_low 6 ALIGNMENT 0 YS2-15e07.q1k vc_1 338 62 2513 2512 C 277 0.00 379 reject_low 3 ALIGNMENT 0 YS2-15e07.q1k vc_3 338 62 2513 2512 C 277 0.00 379 reject_low 5 ALIGNMENT 294 YS2-15e07.q1k chr11 339 37 390383 390685 C 303 100.00 379 accept_chi 1 ALIGNMENT 20 YS2-15e07.q1k vc_5 40 18 2376 2398 C 23 95.65 379 reject_low 8 ALIGNMENT 0 YS2-15e07.p1k chr11 334 352 390685 390684 F 19 0.00 352 accept_chi 0 ALIGNMENT 41 YS2-15e07.q1k vc_4 339 379 5831 5871 F 41 100.00 379 reject_low 6 ALIGNMENT 294 YS2-15e07.p1k chr11 31 333 390383 390685 F 303 100.00 352 accept_chi 0 ALIGNMENT 0 YS2-15e07.q1k chr11 379 340 390384 390383 C 40 0.00 379 accept_chi 1 ALIGNMENT 0 YS2-15e07.q1k vc_5 327 41 50 2375 C 287 0.00 379 reject_low 8 ALIGNMENT 38 YS2-15e07.q1k vc_7 342 379 13525 13562 F 38 100.00 379 reject_low 7 ALIGNMENT 41 YS2-15e07.q1k vc_1 379 339 2472 2512 C 41 100.00 379 reject_low 3 ALIGNMENT 0 YS2-15e07.q1k vc_7 62 341 13525 13524 F 280 0.00 379 reject_low 7 ALIGNMENT 41 YS2-15e07.q1k vc_2 379 339 2105 2145 C 41 100.00 379 reject_low 4 ALIGNMENT 37 YS2-15e07.q1k vc_5 376 328 1 49 C 49 91.84 379 reject_low 8 ALIGNMENT 0 YS2-15e07.q1k vc_5 327 62 5077 5076 C 266 0.00 379 reject_low 2 ALIGNMENT 40 YS2-15e07.q1k vc_5 379 328 5025 5076 C 52 92.31 379 reject_low 2 ALIGNMENT 0 YS2-15e07.q1k vc_2 338 62 2146 2145 C 277 0.00 379 reject_low 4 ALIGNMENT 41 YS2-15e07.q1k vc_3 379 339 2472 2512 C 41 100.00 379 reject_low 5 ALIGNMENT 43 YS2-15e08.q1k vc_4 178 221 5828 5871 F 44 100.00 221 reject_low 4 ALIGNMENT 43 YS2-15e08.q1k vc_1 221 178 2472 2515 C 44 100.00 221 reject_low 1 ALIGNMENT 0 YS2-15e08.q1k vc_1 177 62 2516 2515 C 116 0.00 221 reject_low 1 ALIGNMENT 43 YS2-15e08.q1k vc_2 221 178 2105 2148 C 44 100.00 221 reject_low 2 ALIGNMENT 0 YS2-15e08.q1k chr04 181 221 70027 70026 F 41 0.00 221 accept 0 ALIGNMENT 0 YS2-15e08.q1k vc_7 62 183 13525 13524 F 122 0.00 221 reject_low 6 ALIGNMENT 39 YS2-15e08.q1k vc_5 221 183 5025 5063 C 39 100.00 221 reject_low 5 ALIGNMENT 0 YS2-15e08.q1k vc_4 62 177 5828 5827 F 116 0.00 221 reject_low 4 ALIGNMENT 38 YS2-15e08.q1k vc_7 184 221 13525 13562 F 38 100.00 221 reject_low 6 ALIGNMENT 36 YS2-15e08.q1k vc_5 218 183 1 36 C 36 100.00 221 reject_low 7 ALIGNMENT 0 YS2-15e08.q1k vc_5 182 62 37 36 C 121 0.00 221 reject_low 7 ALIGNMENT 0 YS2-15e08.q1k vc_2 177 62 2149 2148 C 116 0.00 221 reject_low 2 ALIGNMENT 149 YS2-15e08.q1k chr04 25 180 69872 70027 F 156 99.36 221 accept 0 ALIGNMENT 43 YS2-15e08.q1k vc_3 221 178 2472 2515 C 44 100.00 221 reject_low 3 ALIGNMENT 0 YS2-15e08.q1k vc_3 177 62 2516 2515 C 116 0.00 221 reject_low 3 ALIGNMENT 0 YS2-15e08.q1k vc_5 182 62 5064 5063 C 121 0.00 221 reject_low 5 ALIGNMENT 923 YS2-15e09.p1k chr10 1179 34 222772 223927 C 1146 94.94 1429 accept 0 ALIGNMENT 946 YS2-15e09.q1k chr10 41 1175 218658 219806 F 1135 95.68 1300 accept 0 ALIGNMENT 901 YS2-15e10.p1k chr02 41 1119 708027 709122 F 1079 96.20 1388 accept 0 ALIGNMENT 985 YS2-15e10.q1k chr02 1180 41 711016 712175 C 1140 96.75 1319 accept 0 ALIGNMENT 39 YS2-15e11.q1k vc_5 244 206 5025 5063 C 39 100.00 244 reject_low 5 ALIGNMENT 0 YS2-15e11.q1k vc_3 204 62 2512 2511 C 143 0.00 244 reject_low 3 ALIGNMENT 0 YS2-15e11.q1k chr15 244 207 401378 401377 C 38 0.00 244 accept_chi 1 ALIGNMENT 0 YS2-15e11.p1k chr15 207 225 401553 401552 F 19 0.00 225 accept_chi 0 ALIGNMENT 0 YS2-15e11.q1k vc_5 205 62 5064 5063 C 144 0.00 244 reject_low 5 ALIGNMENT 0 YS2-15e11.q1k vc_1 204 62 2512 2511 C 143 0.00 244 reject_low 2 ALIGNMENT 0 YS2-15e11.q1k vc_5 205 62 37 36 C 144 0.00 244 reject_low 7 ALIGNMENT 168 YS2-15e11.q1k chr15 206 30 401377 401553 C 177 100.00 244 accept_chi 1 ALIGNMENT 168 YS2-15e11.p1k chr15 30 206 401377 401553 F 177 100.00 225 accept_chi 0 ALIGNMENT 0 YS2-15e11.q1k vc_4 62 204 5832 5831 F 143 0.00 244 reject_low 4 ALIGNMENT 40 YS2-15e11.q1k vc_3 244 205 2472 2511 C 40 100.00 244 reject_low 3 ALIGNMENT 0 YS2-15e11.q1k vc_7 62 206 13525 13524 F 145 0.00 244 reject_low 6 ALIGNMENT 36 YS2-15e11.q1k vc_5 241 206 1 36 C 36 100.00 244 reject_low 7 ALIGNMENT 40 YS2-15e11.q1k vc_4 205 244 5832 5871 F 40 100.00 244 reject_low 4 ALIGNMENT 40 YS2-15e11.q1k vc_1 244 205 2472 2511 C 40 100.00 244 reject_low 2 ALIGNMENT 38 YS2-15e11.q1k vc_7 207 244 13525 13562 F 38 100.00 244 reject_low 6 ALIGNMENT 42 YS2-15e13.q1k vc_4 212 253 5830 5871 F 42 100.00 253 reject_low 4 ALIGNMENT 0 YS2-15e13.q1k vc_5 214 62 5064 5063 C 153 0.00 253 reject_low 5 ALIGNMENT 0 YS2-15e13.q1k vc_1 211 62 2514 2513 C 150 0.00 253 reject_low 2 ALIGNMENT 42 YS2-15e13.q1k vc_3 253 212 2472 2513 C 42 100.00 253 reject_low 3 ALIGNMENT 0 YS2-15e13.q1k vc_5 214 62 37 36 C 153 0.00 253 reject_low 7 ALIGNMENT 39 YS2-15e13.q1k vc_5 253 215 5025 5063 C 39 100.00 253 reject_low 5 ALIGNMENT 0 YS2-15e13.q1k vc_7 62 215 13525 13524 F 154 0.00 253 reject_low 6 ALIGNMENT 0 YS2-15e13.q1k vc_3 211 62 2514 2513 C 150 0.00 253 reject_low 3 ALIGNMENT 181 YS2-15e13.p1k chr13 216 32 593179 593363 C 185 100.00 234 accept_chi 0 ALIGNMENT 177 YS2-15e13.q1k chr13 32 212 593183 593363 F 181 100.00 253 accept_chi 1 ALIGNMENT 36 YS2-15e13.q1k vc_5 250 215 1 36 C 36 100.00 253 reject_low 7 ALIGNMENT 0 YS2-15e13.p1k chr13 234 217 593180 593179 C 18 0.00 234 accept_chi 0 ALIGNMENT 0 YS2-15e13.q1k vc_4 62 211 5830 5829 F 150 0.00 253 reject_low 4 ALIGNMENT 38 YS2-15e13.q1k vc_7 216 253 13525 13562 F 38 100.00 253 reject_low 6 ALIGNMENT 0 YS2-15e13.q1k chr13 213 253 593363 593362 F 41 0.00 253 accept_chi 1 ALIGNMENT 42 YS2-15e13.q1k vc_1 253 212 2472 2513 C 42 100.00 253 reject_low 2 ALIGNMENT 1059 YS2-15e14.p1k chr04 1230 32 1066670 1067866 C 1199 97.16 1238 accept 0 ALIGNMENT 974 YS2-15e14.q1k chr04 37 1114 1062938 1064020 F 1078 97.59 1114 accept 0 ALIGNMENT 978 YS2-15e15.q1k chr02 1147 40 334444 335566 C 1108 96.84 1259 accept 0 ALIGNMENT 1013 YS2-15e15.p1k chr02 30 1221 331777 332972 F 1192 96.14 1230 accept 0 ALIGNMENT 1017 YS2-15e16.q1k chr16 1204 35 109738 110915 C 1170 96.50 1260 accept 0 ALIGNMENT 973 YS2-15e16.p1k chr16 37 1257 106263 107472 F 1221 94.84 1257 accept 0 ALIGNMENT 964 YS2-15e17.q1k chr08 1172 36 194069 195222 C 1137 95.78 1266 accept 0 ALIGNMENT 1027 YS2-15e17.p1k chr08 29 1267 188058 189291 F 1239 95.24 1302 accept 0 ALIGNMENT 0 YS2-15e17.q1k chr08 454 62 193540 193539 C 393 0.00 1266 reject_low 1 ALIGNMENT 410 YS2-15e17.q1k chr08 1167 455 192812 193539 C 713 86.54 1266 reject_low 1 ALIGNMENT 1060 YS2-15e18.q1k chr13 34 1230 888344 889546 F 1197 96.91 1286 accept 0 ALIGNMENT 998 YS2-15e18.p1k chr13 1189 39 889482 890643 C 1151 96.44 1267 accept 0 ALIGNMENT 1011 YS2-15e19.q1k chr12 46 1274 938638 939871 F 1229 95.12 1326 accept 0 ALIGNMENT 956 YS2-15e19.p1k chr12 1184 28 949465 950641 C 1157 95.07 1245 accept 0 ALIGNMENT 27 YS2-15e20.q1k chr12 911 874 481817 481854 C 38 92.11 1256 reject_low 19 ALIGNMENT 0 YS2-15e20.p1k chr04 62 904 1210451 1210450 F 843 0.00 1232 reject_low 29 ALIGNMENT 0 YS2-15e20.q1k chr03 895 655 127707 127706 C 241 0.00 1256 reject_low 16 ALIGNMENT 0 YS2-15e20.q1k chr01 873 62 160532 160531 C 812 0.00 1256 reject_low 17 ALIGNMENT 0 YS2-15e20.q1k chr16 873 649 810515 810671 C 225 0.00 1256 reject_low 36 ALIGNMENT 27 YS2-15e20.q1k chr01 911 874 160494 160531 C 38 92.11 1256 reject_low 17 ALIGNMENT 70 YS2-15e20.p1k chr05 1065 905 494487 494655 C 161 83.85 1232 reject_low 32 ALIGNMENT 901 YS2-15e20.p1k chr15 32 1104 973209 974295 F 1073 95.90 1232 reject_low 1 ALIGNMENT 0 YS2-15e20.p1k chr12 62 904 596904 596903 F 843 0.00 1232 reject_low 30 ALIGNMENT 81 YS2-15e20.q1k chr11 649 566 74628 74711 C 84 98.81 1256 reject_low 24 ALIGNMENT 895 YS2-15e20.p1k chr15 1104 32 706010 707096 C 1073 95.71 1232 reject_low 2 ALIGNMENT 0 YS2-15e20.q1k chr14 895 651 102715 102714 C 245 0.00 1256 reject_low 15 ALIGNMENT 858 YS2-15e20.p1k chr04 1090 32 515646 516716 C 1059 94.81 1232 reject_low 11 ALIGNMENT 0 YS2-15e20.q1k chr15 840 657 228165 228320 C 184 0.00 1256 reject_low 14 ALIGNMENT 0 YS2-15e20.q1k chr15 895 650 487440 487439 C 246 0.00 1256 reject_low 22 ALIGNMENT 82 YS2-15e20.q1k chr03 654 566 127706 127795 C 89 97.75 1256 reject_low 16 ALIGNMENT 0 YS2-15e20.q1k chr16 566 62 810754 810753 C 505 0.00 1256 reject_low 36 ALIGNMENT 0 YS2-15e20.q1k chr11 895 650 74629 74628 C 246 0.00 1256 reject_low 24 ALIGNMENT 0 YS2-15e20.q1k chr14 895 649 632602 632601 C 247 0.00 1256 reject_low 25 ALIGNMENT 27 YS2-15e20.q1k chr16 911 874 810477 810514 C 38 92.11 1256 reject_low 36 ALIGNMENT 0 YS2-15e20.q1k chr15 565 62 228411 228410 C 504 0.00 1256 reject_low 14 ALIGNMENT 70 YS2-15e20.p1k chr07 1065 905 563839 564007 C 161 83.85 1232 reject_low 33 ALIGNMENT 89 YS2-15e20.q1k chr14 650 558 102714 102806 C 93 98.92 1256 reject_low 15 ALIGNMENT 0 YS2-15e20.q1k chr16 62 873 62083 62082 F 812 0.00 1256 reject_low 21 ALIGNMENT 0 YS2-15e20.q1k chr12 850 895 976253 976252 F 46 0.00 1256 accept_trans 0 ALIGNMENT 0 YS2-15e20.p1k chr13 904 62 359163 359162 C 843 0.00 1232 reject_low 31 ALIGNMENT 70 YS2-15e20.p1k chr10 905 1065 476138 476306 F 161 83.85 1232 reject_low 34 ALIGNMENT 877 YS2-15e20.p1k chr14 1104 32 563979 565065 C 1073 95.15 1232 reject_low 5 ALIGNMENT 73 YS2-15e20.p1k chr02 905 1065 263334 263502 F 161 84.47 1232 reject_low 28 ALIGNMENT 70 YS2-15e20.p1k chr16 905 1065 848172 848340 F 161 83.85 1232 reject_low 35 ALIGNMENT 0 YS2-15e20.q1k chr07 571 62 731219 731218 C 510 0.00 1256 reject_low 23 ALIGNMENT 0 YS2-15e20.p1k chr02 62 904 263334 263333 F 843 0.00 1232 reject_low 28 ALIGNMENT 868 YS2-15e20.p1k chr06 32 1104 140835 141921 F 1073 94.87 1232 reject_low 8 ALIGNMENT 73 YS2-15e20.p1k chr12 905 1065 596904 597072 F 161 84.47 1232 reject_low 30 ALIGNMENT 79 YS2-15e20.q1k chr14 648 567 632601 632682 C 82 98.78 1256 reject_low 25 ALIGNMENT 80 YS2-15e20.q1k chr15 656 566 228321 228410 C 91 96.70 1256 reject_low 14 ALIGNMENT 868 YS2-15e20.p1k chr07 32 1104 814379 815465 F 1073 94.87 1232 reject_low 9 ALIGNMENT 880 YS2-15e20.p1k chr04 32 1104 984092 985178 F 1073 95.25 1232 reject_low 4 ALIGNMENT 82 YS2-15e20.q1k chr15 649 565 487439 487523 C 85 98.82 1256 reject_low 22 ALIGNMENT 0 YS2-15e20.p1k chr07 904 62 564008 564007 C 843 0.00 1232 reject_low 33 ALIGNMENT 76 YS2-15e20.q1k chr16 648 567 810672 810753 C 82 97.56 1256 reject_low 36 ALIGNMENT 0 YS2-15e20.q1k chr10 62 873 478009 478008 F 812 0.00 1256 reject_low 18 ALIGNMENT 0 YS2-15e20.q1k chr15 564 62 487524 487523 C 503 0.00 1256 reject_low 22 ALIGNMENT 51 YS2-15e20.q1k chr03 858 940 149508 149590 F 83 89.16 1256 reject_low 13 ALIGNMENT 0 YS2-15e20.q1k chr14 557 62 102807 102806 C 496 0.00 1256 reject_low 15 ALIGNMENT 81 YS2-15e20.q1k chr07 652 572 731138 731218 C 81 100.00 1256 reject_low 23 ALIGNMENT 0 YS2-15e20.q1k chr11 565 62 74712 74711 C 504 0.00 1256 reject_low 24 ALIGNMENT 862 YS2-15e20.p1k chr12 32 1104 944116 945202 F 1073 94.69 1232 reject_low 10 ALIGNMENT 73 YS2-15e20.p1k chr13 1065 905 358994 359162 C 161 84.47 1232 reject_low 31 ALIGNMENT 0 YS2-15e20.q1k chr14 566 62 632683 632682 C 505 0.00 1256 reject_low 25 ALIGNMENT 0 YS2-15e20.p1k chr02 62 904 224797 224796 F 843 0.00 1232 reject_low 27 ALIGNMENT 27 YS2-15e20.q1k chr10 874 911 478009 478046 F 38 92.11 1256 reject_low 18 ALIGNMENT 868 YS2-15e20.p1k chr12 1104 32 977683 978769 C 1073 94.87 1232 accept_trans 0 ALIGNMENT 0 YS2-15e20.q1k chr07 895 653 731139 731138 C 243 0.00 1256 reject_low 23 ALIGNMENT 0 YS2-15e20.q1k chr03 62 857 149508 149507 F 796 0.00 1256 reject_low 13 ALIGNMENT 48 YS2-15e20.q1k chr15 927 841 228078 228164 C 87 87.36 1256 reject_low 14 ALIGNMENT 0 YS2-15e20.q1k chr13 62 873 196376 196375 F 812 0.00 1256 reject_low 20 ALIGNMENT 73 YS2-15e20.p1k chr04 905 1065 1210451 1210619 F 161 84.47 1232 reject_low 29 ALIGNMENT 0 YS2-15e20.p1k chr10 62 904 476138 476137 F 843 0.00 1232 reject_low 34 ALIGNMENT 73 YS2-15e20.p1k chr02 905 1065 224797 224965 F 161 84.47 1232 reject_low 27 ALIGNMENT 762 YS2-15e20.q1k chr12 34 849 975438 976253 F 816 99.51 1256 accept_trans 0 ALIGNMENT 0 YS2-15e20.q1k chr12 873 62 481855 481854 C 812 0.00 1256 reject_low 19 ALIGNMENT 871 YS2-15e20.p1k chr07 1104 32 570690 571776 C 1073 94.97 1232 reject_low 6 ALIGNMENT 0 YS2-15e20.p1k chr05 904 62 494656 494655 C 843 0.00 1232 reject_low 32 ALIGNMENT 78 YS2-15e20.q1k chr06 568 648 137474 137554 F 81 98.77 1256 reject_low 26 ALIGNMENT 892 YS2-15e20.p1k chr04 32 1104 874743 875829 F 1073 95.62 1232 reject_low 3 ALIGNMENT 0 YS2-15e20.p1k chr16 62 904 848172 848171 F 843 0.00 1232 reject_low 35 ALIGNMENT 27 YS2-15e20.q1k chr13 874 911 196376 196413 F 38 92.11 1256 reject_low 20 ALIGNMENT 837 YS2-15e20.p1k chr02 32 1090 32568 33638 F 1059 94.15 1232 reject_low 12 ALIGNMENT 27 YS2-15e20.q1k chr16 874 911 62083 62120 F 38 92.11 1256 reject_low 21 ALIGNMENT 0 YS2-15e20.q1k chr06 62 567 137474 137473 F 506 0.00 1256 reject_low 26 ALIGNMENT 0 YS2-15e20.q1k chr06 649 895 137554 137553 F 247 0.00 1256 reject_low 26 ALIGNMENT 868 YS2-15e20.p1k chr03 32 1104 87737 88823 F 1073 94.87 1232 reject_low 7 ALIGNMENT 0 YS2-15e20.q1k chr03 565 62 127796 127795 C 504 0.00 1256 reject_low 16 ALIGNMENT 1028 YS2-15e21.q1k chr05 30 1172 460462 461606 F 1143 97.03 1172 accept 0 ALIGNMENT 936 YS2-15e21.p1k chr05 1152 33 461212 462310 C 1120 95.45 1164 accept 0 ALIGNMENT 0 YS2-15e22.p1k chr09 862 328 105764 105763 C 535 0.00 1162 reject_low 4 ALIGNMENT 0 YS2-15e22.p1k chr16 62 247 650488 650487 F 186 0.00 1162 reject_low 1 ALIGNMENT 26 YS2-15e22.p1k chr16 248 335 650488 650576 F 88 90.91 1162 reject_low 1 ALIGNMENT 0 YS2-15e22.p1k chr10 273 62 470096 470095 C 212 0.00 1162 reject_low 3 ALIGNMENT 0 YS2-15e22.p1k chr16 336 862 650576 650575 F 527 0.00 1162 reject_low 1 ALIGNMENT 0 YS2-15e22.p1k chr13 326 862 587703 587702 F 537 0.00 1162 reject_low 2 ALIGNMENT 964 YS2-15e22.q1k chr04 1120 34 782455 783545 C 1087 97.24 1160 accept 0 ALIGNMENT 25 YS2-15e22.p1k chr09 327 264 105763 105826 C 64 95.31 1162 reject_low 4 ALIGNMENT 927 YS2-15e22.p1k chr04 38 1159 778516 779660 F 1122 95.63 1162 accept 0 ALIGNMENT 0 YS2-15e22.p1k chr10 862 332 470038 470037 C 531 0.00 1162 reject_low 3 ALIGNMENT 0 YS2-15e22.p1k chr13 62 250 587629 587628 F 189 0.00 1162 reject_low 2 ALIGNMENT 25 YS2-15e22.p1k chr10 331 274 470037 470095 C 58 98.28 1162 reject_low 3 ALIGNMENT 0 YS2-15e22.p1k chr09 263 62 105827 105826 C 202 0.00 1162 reject_low 4 ALIGNMENT 26 YS2-15e22.p1k chr13 251 325 587629 587703 F 75 93.33 1162 reject_low 2 ALIGNMENT 0 YS2-15e24.p1k chr05 109 62 435822 435821 C 48 0.00 334 reject_low 10 ALIGNMENT 0 YS2-15e24.q1k chr13 62 150 480613 480612 F 89 0.00 361 reject_low 31 ALIGNMENT 269 YS2-15e24.q1k chr09 26 320 300094 300387 F 295 98.31 361 accept_chi 0 ALIGNMENT 0 YS2-15e24.p1k chr03 105 62 151359 151358 C 44 0.00 334 reject_low 26 ALIGNMENT 0 YS2-15e24.p1k chr07 192 334 122354 122353 F 143 0.00 334 reject_low 15 ALIGNMENT 38 YS2-15e24.q1k vc_7 324 361 13525 13562 F 38 100.00 361 reject_low 8 ALIGNMENT 68 YS2-15e24.q1k chr06 151 231 226667 226747 F 81 96.30 361 reject_low 33 ALIGNMENT 0 YS2-15e24.q1k chr07 361 247 122259 122258 C 115 0.00 361 reject_low 14 ALIGNMENT 0 YS2-15e24.q1k vc_5 322 62 5064 5063 C 261 0.00 361 reject_low 7 ALIGNMENT 0 YS2-15e24.p1k chr13 108 62 480695 480694 C 47 0.00 334 reject_low 30 ALIGNMENT 0 YS2-15e24.q1k chr13 234 361 480694 480693 F 128 0.00 361 reject_low 31 ALIGNMENT 0 YS2-15e24.p1k chr07 334 192 185713 185712 C 143 0.00 334 reject_low 13 ALIGNMENT 0 YS2-15e24.q1k chr16 150 62 582140 582139 C 89 0.00 361 reject_low 20 ALIGNMENT 0 YS2-15e24.q1k vc_5 322 62 37 36 C 261 0.00 361 reject_low 9 ALIGNMENT 41 YS2-15e24.q1k vc_4 321 361 5831 5871 F 41 100.00 361 reject_low 6 ALIGNMENT 0 YS2-15e24.p1k chr06 110 62 226748 226747 C 49 0.00 334 reject_low 32 ALIGNMENT 0 YS2-15e24.p1k chr07 62 106 876395 876394 F 45 0.00 334 reject_low 24 ALIGNMENT 0 YS2-15e24.q1k chr07 361 236 876396 876395 C 126 0.00 361 reject_low 25 ALIGNMENT 93 YS2-15e24.q1k chr07 151 246 185712 185807 F 96 98.96 361 reject_low 12 ALIGNMENT 137 YS2-15e24.q1k chr04 151 320 1352448 1352617 F 170 94.12 361 reject_low 2 ALIGNMENT 0 YS2-15e24.q1k chr06 62 150 226667 226666 F 89 0.00 361 reject_low 33 ALIGNMENT 82 YS2-15e24.q1k chr05 151 247 135417 135513 F 97 94.85 361 reject_low 16 ALIGNMENT 0 YS2-15e24.q1k chr07 150 62 876480 876479 C 89 0.00 361 reject_low 25 ALIGNMENT 0 YS2-15e24.p1k chr07 95 62 185808 185807 C 34 0.00 334 reject_low 13 ALIGNMENT 0 YS2-15e24.q1k chr04 62 150 1352448 1352447 F 89 0.00 361 reject_low 2 ALIGNMENT 0 YS2-15e24.p1k chr10 185 334 414954 414953 F 150 0.00 334 reject_low 19 ALIGNMENT 0 YS2-15e24.q1k chr03 62 150 151273 151272 F 89 0.00 361 reject_low 27 ALIGNMENT 0 YS2-15e24.q1k chr06 232 361 226747 226746 F 130 0.00 361 reject_low 33 ALIGNMENT 82 YS2-15e24.p1k chr16 101 191 582049 582139 F 91 96.70 334 reject_low 21 ALIGNMENT 0 YS2-15e24.p1k chr09 334 317 300095 300094 C 18 0.00 334 accept_chi 1 ALIGNMENT 0 YS2-15e24.q1k chr11 149 62 202727 202726 C 88 0.00 361 reject_low 23 ALIGNMENT 0 YS2-15e24.p1k chr13 334 192 480614 480613 C 143 0.00 334 reject_low 30 ALIGNMENT 0 YS2-15e24.q1k chr05 62 150 135417 135416 F 89 0.00 361 reject_low 16 ALIGNMENT 79 YS2-15e24.q1k chr04 236 158 1201735 1201813 C 79 100.00 361 reject_low 29 ALIGNMENT 0 YS2-15e24.p1k chr04 334 192 1352449 1352448 C 143 0.00 334 reject_low 3 ALIGNMENT 0 YS2-15e24.q1k chr04 361 237 1201736 1201735 C 125 0.00 361 reject_low 29 ALIGNMENT 82 YS2-15e24.q1k chr16 241 151 582049 582139 C 91 96.70 361 reject_low 20 ALIGNMENT 0 YS2-15e24.p1k chr07 62 95 122258 122257 F 34 0.00 334 reject_low 15 ALIGNMENT 0 YS2-15e24.p1k chr04 62 105 1201735 1201734 F 44 0.00 334 reject_low 28 ALIGNMENT 80 YS2-15e24.q1k chr05 143 232 435732 435821 F 90 96.67 361 reject_low 11 ALIGNMENT 0 YS2-15e24.q1k chr07 150 62 122355 122354 C 89 0.00 361 reject_low 14 ALIGNMENT 89 YS2-15e24.q1k chr07 246 151 122258 122354 C 96 97.92 361 reject_low 14 ALIGNMENT 77 YS2-15e24.q1k chr13 151 233 480613 480694 F 83 98.80 361 reject_low 31 ALIGNMENT 80 YS2-15e24.q1k chr03 151 236 151273 151358 F 86 97.67 361 reject_low 27 ALIGNMENT 0 YS2-15e24.p1k chr07 192 334 876479 876478 F 143 0.00 334 reject_low 24 ALIGNMENT 80 YS2-15e24.p1k chr05 199 110 435732 435821 C 90 96.67 334 reject_low 10 ALIGNMENT 0 YS2-15e24.p1k chr05 334 200 435733 435732 C 135 0.00 334 reject_low 10 ALIGNMENT 0 YS2-15e24.p1k chr06 334 192 226668 226667 C 143 0.00 334 reject_low 32 ALIGNMENT 89 YS2-15e24.p1k chr07 96 191 122258 122354 F 96 97.92 334 reject_low 15 ALIGNMENT 0 YS2-15e24.q1k chr04 157 62 1201814 1201813 C 96 0.00 361 reject_low 29 ALIGNMENT 79 YS2-15e24.p1k chr04 106 184 1201735 1201813 F 79 100.00 334 reject_low 28 ALIGNMENT 41 YS2-15e24.q1k vc_1 361 321 2472 2512 C 41 100.00 361 reject_low 4 ALIGNMENT 0 YS2-15e24.p1k chr11 62 109 202644 202643 F 48 0.00 334 reject_low 22 ALIGNMENT 68 YS2-15e24.p1k chr06 191 111 226667 226747 C 81 96.30 334 reject_low 32 ALIGNMENT 41 YS2-15e24.q1k vc_3 361 321 2472 2512 C 41 100.00 361 reject_low 5 ALIGNMENT 0 YS2-15e24.p1k chr05 94 62 135514 135513 C 33 0.00 334 reject_low 17 ALIGNMENT 77 YS2-15e24.p1k chr13 191 109 480613 480694 C 83 98.80 334 reject_low 30 ALIGNMENT 93 YS2-15e24.p1k chr07 191 96 185712 185807 C 96 98.96 334 reject_low 13 ALIGNMENT 39 YS2-15e24.q1k vc_5 361 323 5025 5063 C 39 100.00 361 reject_low 7 ALIGNMENT 0 YS2-15e24.q1k chr05 248 361 135513 135512 F 114 0.00 361 reject_low 16 ALIGNMENT 36 YS2-15e24.q1k vc_5 358 323 1 36 C 36 100.00 361 reject_low 9 ALIGNMENT 0 YS2-15e24.q1k vc_1 320 62 2513 2512 C 259 0.00 361 reject_low 4 ALIGNMENT 80 YS2-15e24.q1k chr11 232 150 202644 202726 C 83 98.80 361 reject_low 23 ALIGNMENT 0 YS2-15e24.q1k chr05 62 142 435732 435731 F 81 0.00 361 reject_low 11 ALIGNMENT 0 YS2-15e24.p1k chr10 62 95 414866 414865 F 34 0.00 334 reject_low 19 ALIGNMENT 257 YS2-15e24.p1k chr09 316 30 300094 300380 C 287 97.91 334 accept_chi 1 ALIGNMENT 0 YS2-15e24.p1k chr11 193 334 202726 202725 F 142 0.00 334 reject_low 22 ALIGNMENT 83 YS2-15e24.q1k chr10 246 158 414866 414954 C 89 97.75 361 reject_low 18 ALIGNMENT 0 YS2-15e24.p1k chr16 192 334 582139 582138 F 143 0.00 334 reject_low 21 ALIGNMENT 0 YS2-15e24.q1k chr07 62 150 185712 185711 F 89 0.00 361 reject_low 12 ALIGNMENT 83 YS2-15e24.p1k chr10 96 184 414866 414954 F 89 97.75 334 reject_low 19 ALIGNMENT 80 YS2-15e24.p1k chr03 191 106 151273 151358 C 86 97.67 334 reject_low 26 ALIGNMENT 82 YS2-15e24.p1k chr05 191 95 135417 135513 C 97 94.85 334 reject_low 17 ALIGNMENT 0 YS2-15e24.q1k chr10 157 62 414955 414954 C 96 0.00 361 reject_low 18 ALIGNMENT 0 YS2-15e24.q1k chr05 233 361 435821 435820 F 129 0.00 361 reject_low 11 ALIGNMENT 0 YS2-15e24.q1k chr04 321 361 1352617 1352616 F 41 0.00 361 reject_low 2 ALIGNMENT 0 YS2-15e24.q1k chr11 361 233 202645 202644 C 129 0.00 361 reject_low 23 ALIGNMENT 82 YS2-15e24.q1k chr07 235 151 876395 876479 C 85 98.82 361 reject_low 25 ALIGNMENT 125 YS2-15e24.p1k chr04 191 30 1352448 1352610 C 162 93.21 334 reject_low 3 ALIGNMENT 0 YS2-15e24.q1k chr03 237 361 151358 151357 F 125 0.00 361 reject_low 27 ALIGNMENT 0 YS2-15e24.p1k chr05 334 192 135418 135417 C 143 0.00 334 reject_low 17 ALIGNMENT 0 YS2-15e24.q1k chr16 361 242 582050 582049 C 120 0.00 361 reject_low 20 ALIGNMENT 82 YS2-15e24.p1k chr07 107 191 876395 876479 F 85 98.82 334 reject_low 24 ALIGNMENT 0 YS2-15e24.q1k chr07 247 361 185807 185806 F 115 0.00 361 reject_low 12 ALIGNMENT 0 YS2-15e24.p1k chr03 334 192 151274 151273 C 143 0.00 334 reject_low 26 ALIGNMENT 0 YS2-15e24.q1k vc_4 62 320 5831 5830 F 259 0.00 361 reject_low 6 ALIGNMENT 0 YS2-15e24.q1k vc_3 320 62 2513 2512 C 259 0.00 361 reject_low 5 ALIGNMENT 0 YS2-15e24.q1k chr10 361 247 414867 414866 C 115 0.00 361 reject_low 18 ALIGNMENT 0 YS2-15e24.q1k chr09 321 361 300387 300386 F 41 0.00 361 accept_chi 0 ALIGNMENT 0 YS2-15e24.q1k vc_7 62 323 13525 13524 F 262 0.00 361 reject_low 8 ALIGNMENT 0 YS2-15e24.p1k chr16 62 100 582049 582048 F 39 0.00 334 reject_low 21 ALIGNMENT 80 YS2-15e24.p1k chr11 110 192 202644 202726 F 83 98.80 334 reject_low 22 ALIGNMENT 0 YS2-15e24.p1k chr04 185 334 1201813 1201812 F 150 0.00 334 reject_low 28 ALIGNMENT 945 YS2-15f01.p1k chr09 1188 31 72042 73211 C 1158 94.65 1215 accept 0 ALIGNMENT 714 YS2-15f01.q1k chr09 40 1028 67552 68540 F 989 92.72 1362 accept 0 ALIGNMENT 0 YS2-15f02.p1k chr07 401 384 525629 525628 C 18 0.00 401 accept 0 ALIGNMENT 346 YS2-15f02.p1k chr07 383 28 525628 525983 C 356 99.16 401 accept 0 ALIGNMENT 195 YS2-15f03.p1k vc_5 1240 903 4677 5025 C 338 86.98 1303 reject_low 5 ALIGNMENT 26 YS2-15f03.p1k vc_1 933 903 2441 2472 C 31 96.77 1303 reject_low 8 ALIGNMENT 195 YS2-15f03.p1k vc_2 1240 903 1757 2105 C 338 86.98 1303 reject_low 2 ALIGNMENT 195 YS2-15f03.p1k vc_7 903 1240 100 448 F 338 86.98 1303 reject_low 6 ALIGNMENT 0 YS2-15f03.p1k vc_1 902 62 2106 2105 C 841 0.00 1303 reject_low 1 ALIGNMENT 0 YS2-15f03.p1k vc_3 902 62 2473 2472 C 841 0.00 1303 reject_low 9 ALIGNMENT 0 YS2-15f03.p1k vc_2 902 62 2106 2105 C 841 0.00 1303 reject_low 2 ALIGNMENT 195 YS2-15f03.p1k vc_3 1240 903 1757 2105 C 338 86.98 1303 reject_low 3 ALIGNMENT 828 YS2-15f03.p1k chr15 31 885 399569 400424 F 855 99.77 1303 accept 0 ALIGNMENT 0 YS2-15f03.p1k vc_7 62 902 100 99 F 841 0.00 1303 reject_low 6 ALIGNMENT 195 YS2-15f03.p1k vc_4 903 1240 5871 6219 F 338 86.98 1303 reject_low 4 ALIGNMENT 0 YS2-15f03.p1k vc_1 902 62 2473 2472 C 841 0.00 1303 reject_low 8 ALIGNMENT 195 YS2-15f03.p1k vc_1 1240 903 1757 2105 C 338 86.98 1303 reject_low 1 ALIGNMENT 0 YS2-15f03.p1k vc_5 902 62 5026 5025 C 841 0.00 1303 reject_low 5 ALIGNMENT 0 YS2-15f03.p1k vc_4 62 902 5871 5870 F 841 0.00 1303 reject_low 4 ALIGNMENT 0 YS2-15f03.p1k vc_3 902 62 2106 2105 C 841 0.00 1303 reject_low 3 ALIGNMENT 0 YS2-15f03.p1k vc_7 62 902 13562 13561 F 841 0.00 1303 reject_low 7 ALIGNMENT 26 YS2-15f03.p1k vc_3 933 903 2441 2472 C 31 96.77 1303 reject_low 9 ALIGNMENT 195 YS2-15f03.p1k vc_7 903 1240 13562 13910 F 338 86.98 1303 reject_low 7 ALIGNMENT 1004 YS2-15f04.q1k chr15 37 1221 800342 801514 F 1185 96.88 1362 accept 0 ALIGNMENT 1011 YS2-15f04.p1k chr15 1115 31 800602 801692 C 1085 98.62 1288 accept 0 ALIGNMENT 945 YS2-15f05.p1k chr15 37 1141 79070 80187 F 1105 96.11 1260 accept 0 ALIGNMENT 1006 YS2-15f05.q1k chr15 1227 37 82229 83414 C 1191 95.80 1233 accept 0 ALIGNMENT 138 YS2-15f06.p1k chrm 506 352 60571 60725 C 155 100.00 1267|0,1 accept 0 ALIGNMENT 123 YS2-15f06.p1k vc_7 992 1205 13566 13790 F 214 87.38 1267 reject_low 2 ALIGNMENT 0 YS2-15f06.p1k vc_7 62 991 13566 13565 F 930 0.00 1267 reject_low 2 ALIGNMENT 0 YS2-15f06.p1k chrm 352 353 60725 61867 C 0 0.00 1267 accept 0 ALIGNMENT 0 YS2-15f06.p1k vc_7 62 991 104 103 F 930 0.00 1267 reject_low 1 ALIGNMENT 360 YS2-15f06.p1k chrm 970 511 60023 60485 C 460 99.35 1267 accept 0 ALIGNMENT 123 YS2-15f06.p1k vc_7 992 1205 104 328 F 214 87.38 1267 reject_low 1 ALIGNMENT 288 YS2-15f06.p1k chrm 353 38 61867 62182 C 316 99.37 1267|1,0 accept 0 ALIGNMENT 0 YS2-15f06.p1k chrm 510 507 60486 60570 C 4 0.00 1267 accept 0 ALIGNMENT 0 YS2-15f07.p1k scplasm1 62 915 341 340 F 854 0.00 1227 reject_low 1 ALIGNMENT 1064 YS2-15f07.p1k scplasm1 1226 31 4000 5197 C 1196 96.82 1227 accept 0 ALIGNMENT 0 YS2-15f07.p1k vc_6 62 915 6352 6351 F 854 0.00 1227 reject_low 2 ALIGNMENT 201 YS2-15f07.p1k scplasm1 916 1226 341 653 F 311 88.75 1227 reject_low 1 ALIGNMENT 158 YS2-15f07.p1k vc_6 916 1097 6352 6535 F 182 96.15 1227 reject_low 2 ALIGNMENT 20 YS2-15f08.p1k vc_7 826 807 2727 2746 C 20 100.00 1213 reject_low 14 ALIGNMENT 26 YS2-15f08.p1k vc_1 856 826 2441 2472 C 31 96.77 1213 reject_low 15 ALIGNMENT 20 YS2-15f08.p1k vc_1 807 826 2512 2531 F 20 100.00 1213 reject_low 9 ALIGNMENT 0 YS2-15f08.p1k vc_3 827 863 2531 2530 F 37 0.00 1213 reject_low 11 ALIGNMENT 0 YS2-15f08.p1k vc_5 825 62 5026 5025 C 764 0.00 1213 reject_low 5 ALIGNMENT 265 YS2-15f08.p1k vc_3 1210 826 1711 2105 C 385 90.91 1213 reject_low 4 ALIGNMENT 20 YS2-15f08.p1k vc_5 807 826 2379 2398 F 20 100.00 1213 reject_low 13 ALIGNMENT 0 YS2-15f08.p1k vc_1 62 806 2512 2511 F 745 0.00 1213 reject_low 9 ALIGNMENT 250 YS2-15f08.p1k vc_4 826 1171 5871 6223 F 346 91.91 1213 reject_low 8 ALIGNMENT 265 YS2-15f08.p1k vc_5 1210 826 4631 5025 C 385 90.91 1213 reject_low 5 ALIGNMENT 0 YS2-15f08.p1k vc_4 62 825 5871 5870 F 764 0.00 1213 reject_low 8 ALIGNMENT 265 YS2-15f08.p1k vc_2 1210 826 1711 2105 C 385 90.91 1213 reject_low 3 ALIGNMENT 703 YS2-15f08.p1k chr07 807 33 986390 987162 C 775 97.42 1213 accept_chi 0 ALIGNMENT 0 YS2-15f08.p1k chr07 863 808 986391 986390 C 56 0.00 1213 accept_chi 0 ALIGNMENT 0 YS2-15f08.p1k vc_2 827 863 2164 2163 F 37 0.00 1213 reject_low 10 ALIGNMENT 0 YS2-15f08.p1k vc_7 863 827 2728 2727 C 37 0.00 1213 reject_low 14 ALIGNMENT 265 YS2-15f08.p1k vc_7 826 1210 100 494 F 385 90.91 1213 reject_low 6 ALIGNMENT 0 YS2-15f08.p1k vc_2 825 62 2106 2105 C 764 0.00 1213 reject_low 3 ALIGNMENT 0 YS2-15f08.p1k vc_1 825 62 2106 2105 C 764 0.00 1213 reject_low 2 ALIGNMENT 20 YS2-15f08.p1k vc_4 826 807 5812 5831 C 20 100.00 1213 reject_low 12 ALIGNMENT 0 YS2-15f08.p1k vc_3 825 62 2106 2105 C 764 0.00 1213 reject_low 4 ALIGNMENT 0 YS2-15f08.p1k vc_4 863 827 5813 5812 C 37 0.00 1213 reject_low 12 ALIGNMENT 0 YS2-15f08.p1k vc_1 825 62 2473 2472 C 764 0.00 1213 reject_low 15 ALIGNMENT 265 YS2-15f08.p1k vc_7 826 1210 13562 13956 F 385 90.91 1213 reject_low 7 ALIGNMENT 0 YS2-15f08.p1k vc_7 62 825 100 99 F 764 0.00 1213 reject_low 6 ALIGNMENT 20 YS2-15f08.p1k vc_2 807 826 2145 2164 F 20 100.00 1213 reject_low 10 ALIGNMENT 0 YS2-15f08.p1k vc_5 62 806 2379 2378 F 745 0.00 1213 reject_low 13 ALIGNMENT 0 YS2-15f08.p1k vc_7 806 62 2747 2746 C 745 0.00 1213 reject_low 14 ALIGNMENT 0 YS2-15f08.p1k vc_7 62 825 13562 13561 F 764 0.00 1213 reject_low 7 ALIGNMENT 393 YS2-15f08.q1k chr07 1 587 986415 987001 F 587 89.61 1172 accept_chi 1 ALIGNMENT 0 YS2-15f08.p1k vc_2 62 806 2145 2144 F 745 0.00 1213 reject_low 10 ALIGNMENT 0 YS2-15f08.p1k vc_3 62 806 2512 2511 F 745 0.00 1213 reject_low 11 ALIGNMENT 20 YS2-15f08.p1k vc_3 807 826 2512 2531 F 20 100.00 1213 reject_low 11 ALIGNMENT 0 YS2-15f08.p1k vc_3 825 62 2473 2472 C 764 0.00 1213 reject_low 16 ALIGNMENT 0 YS2-15f08.p1k vc_1 827 863 2531 2530 F 37 0.00 1213 reject_low 9 ALIGNMENT 0 YS2-15f08.p1k vc_4 806 62 5832 5831 C 745 0.00 1213 reject_low 12 ALIGNMENT 265 YS2-15f08.p1k vc_1 1210 826 1711 2105 C 385 90.91 1213 reject_low 2 ALIGNMENT 0 YS2-15f08.p1k vc_5 827 863 2398 2397 F 37 0.00 1213 reject_low 13 ALIGNMENT 26 YS2-15f08.p1k vc_3 856 826 2441 2472 C 31 96.77 1213 reject_low 16 ALIGNMENT 1024 YS2-15f11.p1k chr16 32 1231 663628 664836 F 1200 96.08 1287 accept 0 ALIGNMENT 991 YS2-15f11.q1k chr16 1134 29 666912 668027 C 1106 97.29 1298 accept 0 ALIGNMENT 953 YS2-15f12.q1k chr11 27 1130 359690 360808 F 1104 96.83 1285 accept 0 ALIGNMENT 934 YS2-15f12.p1k chr11 1202 34 362803 363972 C 1169 94.27 1308 accept 0 ALIGNMENT 21 YS2-15f14.p1k chr07 1211 1174 128447 128485 C 38 86.84 1267 reject_bad_break 0 ALIGNMENT 0 YS2-15f14.p1k chr07 1173 1143 128486 128513 C 31 0.00 1267 reject_bad_break 0 ALIGNMENT 680 YS2-15f14.q1k chr05 1015 52 183534 184472 C 964 92.12 1303 accept_chi 1 ALIGNMENT 950 YS2-15f14.p1k chr07 1142 33 128514 129621 C 1110 95.14 1267 reject_bad_break 0 ALIGNMENT 1028 YS2-15f16.p1k chr05 33 1171 179899 181044 F 1139 97.89 1220 accept 0 ALIGNMENT 927 YS2-15f16.q1k chr05 1080 31 183416 184475 C 1050 97.05 1221 accept 0 ALIGNMENT 924 YS2-15f17.q1k chr13 31 1036 46275 47286 F 1006 97.81 1276 accept 0 ALIGNMENT 940 YS2-15f17.p1k chr13 1086 34 48989 50047 C 1053 98.29 1255 accept 0 ALIGNMENT 0 YS2-15f18.q1k vc_1 482 62 2513 2512 C 421 0.00 523 reject_low 2 ALIGNMENT 423 YS2-15f18.q1k chr15 39 483 266568 267012 F 445 99.55 523 accept_chi 0 ALIGNMENT 39 YS2-15f18.q1k vc_5 523 485 5025 5063 C 39 100.00 523 reject_low 6 ALIGNMENT 0 YS2-15f18.q1k vc_3 482 62 2513 2512 C 421 0.00 523 reject_low 4 ALIGNMENT 0 YS2-15f18.q1k vc_7 62 485 13525 13524 F 424 0.00 523 reject_low 7 ALIGNMENT 0 YS2-15f18.q1k vc_2 482 62 2146 2145 C 421 0.00 523 reject_low 3 ALIGNMENT 419 YS2-15f18.p1k chr15 474 31 266568 267012 C 444 99.32 493 accept_chi 1 ALIGNMENT 41 YS2-15f18.q1k vc_1 523 483 2472 2512 C 41 100.00 523 reject_low 2 ALIGNMENT 0 YS2-15f18.q1k vc_5 484 62 37 36 C 423 0.00 523 reject_low 8 ALIGNMENT 0 YS2-15f18.q1k vc_4 62 482 5831 5830 F 421 0.00 523 reject_low 5 ALIGNMENT 41 YS2-15f18.q1k vc_4 483 523 5831 5871 F 41 100.00 523 reject_low 5 ALIGNMENT 36 YS2-15f18.q1k vc_5 520 485 1 36 C 36 100.00 523 reject_low 8 ALIGNMENT 41 YS2-15f18.q1k vc_3 523 483 2472 2512 C 41 100.00 523 reject_low 4 ALIGNMENT 0 YS2-15f18.q1k vc_5 484 62 5064 5063 C 423 0.00 523 reject_low 6 ALIGNMENT 0 YS2-15f18.p1k chr15 493 475 266569 266568 C 19 0.00 493 accept_chi 1 ALIGNMENT 38 YS2-15f18.q1k vc_7 486 523 13525 13562 F 38 100.00 523 reject_low 7 ALIGNMENT 41 YS2-15f18.q1k vc_2 523 483 2105 2145 C 41 100.00 523 reject_low 3 ALIGNMENT 0 YS2-15f18.q1k chr15 484 523 267012 267011 F 40 0.00 523 accept_chi 0 ALIGNMENT 978 YS2-15f20.q1k chr02 43 1158 73398 74522 F 1116 96.33 1283 accept 0 ALIGNMENT 960 YS2-15f20.p1k chr02 1219 38 76761 77953 C 1182 95.09 1261 accept 0 ALIGNMENT 893 YS2-15f21.p1k chr05 29 1062 532266 533286 F 1034 97.29 1192 accept 0 ALIGNMENT 950 YS2-15f21.q1k chr05 1178 33 535181 536328 C 1146 96.16 1179 accept 0 ALIGNMENT 276 YS2-15f22.q1k vc_5 140 523 2398 2778 F 384 91.67 1249 reject_vc 5 ALIGNMENT 0 YS2-15f22.q1k vc_5 228 141 5026 5025 C 88 0.00 1249 reject_low 14 ALIGNMENT 0 YS2-15f22.q1k vc_5 62 139 2398 2397 F 78 0.00 1249 reject_vc 5 ALIGNMENT 40 YS2-15f22.q1k vc_1 140 101 2472 2511 C 40 100.00 1249 reject_low 11 ALIGNMENT 0 YS2-15f22.q1k vc_7 350 351 5172 6360 C 0 0.00 1249 reject_low 10 ALIGNMENT 0 YS2-15f22.q1k vc_2 100 62 2145 2144 C 39 0.00 1249 reject_low 12 ALIGNMENT 0 YS2-15f22.q1k vc_5 101 62 37 36 C 40 0.00 1249 reject_low 17 ALIGNMENT 0 YS2-15f22.q1k vc_4 141 140 5872 6353 F 0 0.00 1249 reject_low 8 ALIGNMENT 0 YS2-15f22.q1k vc_5 228 138 2 1 C 91 0.00 1249 reject_low 17 ALIGNMENT 0 YS2-15f22.q1k vc_7 62 102 63 62 F 41 0.00 1249 reject_low 15 ALIGNMENT 0 YS2-15f22.q1k vc_7 141 228 100 99 F 88 0.00 1249 reject_low 15 ALIGNMENT 0 YS2-15f22.q1k vc_2 228 141 2106 2105 C 88 0.00 1249 reject_low 12 ALIGNMENT 38 YS2-15f22.q1k vc_7 103 140 63 100 F 38 100.00 1249 reject_low 15 ALIGNMENT 88 YS2-15f22.q1k vc_7 523 350 5002 5172 C 174 85.06 1249|0,1 reject_low 10 ALIGNMENT 38 YS2-15f22.q1k vc_7 103 140 13525 13562 F 38 100.00 1249 reject_low 16 ALIGNMENT 0 YS2-15f22.q1k chr08 101 228 286160 286159 F 128 0.00 1249 accept 0 ALIGNMENT 0 YS2-15f22.q1k vc_4 62 100 5832 5831 F 39 0.00 1249 reject_low 8 ALIGNMENT 36 YS2-15f22.q1k vc_5 137 102 1 36 C 36 100.00 1249 reject_low 17 ALIGNMENT 87 YS2-15f22.q1k vc_4 228 140 1446 1534 C 89 100.00 1249 reject_low 9 ALIGNMENT 0 YS2-15f22.q1k vc_3 100 62 2512 2511 C 39 0.00 1249 reject_low 13 ALIGNMENT 276 YS2-15f22.q1k vc_2 140 523 2164 2544 F 384 91.67 1249 reject_vc 3 ALIGNMENT 0 YS2-15f22.q1k vc_1 100 62 2512 2511 C 39 0.00 1249 reject_low 11 ALIGNMENT 0 YS2-15f22.q1k vc_7 62 102 13525 13524 F 41 0.00 1249 reject_low 16 ALIGNMENT 0 YS2-15f22.q1k vc_4 139 62 1535 1534 C 78 0.00 1249 reject_low 9 ALIGNMENT 270 YS2-15f22.q1k vc_4 523 140 5430 5812 C 384 91.15 1249 reject_vc 6 ALIGNMENT 0 YS2-15f22.q1k vc_5 101 62 5064 5063 C 40 0.00 1249 reject_low 14 ALIGNMENT 0 YS2-15f22.q1k vc_7 141 228 13562 13561 F 88 0.00 1249 reject_low 16 ALIGNMENT 0 YS2-15f22.q1k vc_1 62 139 2531 2530 F 78 0.00 1249 reject_vc 2 ALIGNMENT 70 YS2-15f22.q1k chr08 28 100 286088 286160 F 73 98.63 1249 accept 0 ALIGNMENT 147 YS2-15f22.q1k vc_4 140 301 126 287 F 162 97.53 1249 reject_low 7 ALIGNMENT 0 YS2-15f22.q1k vc_1 228 141 2473 2472 C 88 0.00 1249 reject_low 11 ALIGNMENT 40 YS2-15f22.q1k vc_4 101 140 5832 5871 F 40 100.00 1249 reject_low 8 ALIGNMENT 0 YS2-15f22.q1k vc_7 299 62 6412 6411 C 238 0.00 1249 reject_low 10 ALIGNMENT 0 YS2-15f22.q1k vc_7 139 62 2728 2727 C 78 0.00 1249 reject_vc 1 ALIGNMENT 40 YS2-15f22.q1k vc_2 140 101 2105 2144 C 40 100.00 1249 reject_low 12 ALIGNMENT 40 YS2-15f22.q1k vc_3 140 101 2472 2511 C 40 100.00 1249 reject_low 13 ALIGNMENT 277 YS2-15f22.q1k vc_7 523 140 2347 2727 C 384 91.67 1249 reject_vc 1 ALIGNMENT 0 YS2-15f22.q1k vc_3 62 139 2531 2530 F 78 0.00 1249 reject_vc 4 ALIGNMENT 0 YS2-15f22.q1k vc_2 62 139 2164 2163 F 78 0.00 1249 reject_vc 3 ALIGNMENT 147 YS2-15f22.q1k vc_4 140 301 6353 6514 F 162 97.53 1249|1,0 reject_low 8 ALIGNMENT 276 YS2-15f22.q1k vc_3 140 523 2531 2911 F 384 91.67 1249 reject_vc 4 ALIGNMENT 0 YS2-15f22.q1k vc_3 228 141 2473 2472 C 88 0.00 1249 reject_low 13 ALIGNMENT 0 YS2-15f22.q1k vc_4 62 139 126 125 F 78 0.00 1249 reject_low 7 ALIGNMENT 0 YS2-15f22.q1k vc_4 139 62 5813 5812 C 78 0.00 1249 reject_vc 6 ALIGNMENT 39 YS2-15f22.q1k vc_5 140 102 5025 5063 C 39 100.00 1249 reject_low 14 ALIGNMENT 43 YS2-15f22.q1k vc_7 351 300 6360 6411 C 52 94.23 1249|1,0 reject_low 10 ALIGNMENT 276 YS2-15f22.q1k vc_1 140 523 2531 2911 F 384 91.67 1249 reject_vc 2 ALIGNMENT 497 YS2-15f23.p1k chr01 63 970 135749 136649 F 908 86.23 1238 accept 0 ALIGNMENT 853 YS2-15g02.q1k chr07 41 1038 33062 34075 F 998 97.09 1241 accept 0 ALIGNMENT 972 YS2-15g02.p1k chr07 1190 35 36546 37714 C 1156 95.59 1269 accept 0 ALIGNMENT 711 YS2-15g03.q1k chr02 1025 49 513187 514175 C 977 92.22 1294 accept 0 ALIGNMENT 997 YS2-15g03.p1k chr02 29 1179 508594 509760 F 1151 96.61 1268 accept 0 ALIGNMENT 39 YS2-15g04.q1k vc_5 246 208 5025 5063 C 39 100.00 246 reject_low 6 ALIGNMENT 0 YS2-15g04.q1k vc_7 62 208 13525 13524 F 147 0.00 246 reject_low 7 ALIGNMENT 0 YS2-15g04.q1k vc_5 207 62 5064 5063 C 146 0.00 246 reject_low 6 ALIGNMENT 38 YS2-15g04.q1k vc_7 209 246 13525 13562 F 38 100.00 246 reject_low 7 ALIGNMENT 41 YS2-15g04.q1k vc_3 246 206 2472 2512 C 41 100.00 246 reject_low 4 ALIGNMENT 160 YS2-15g04.p1k chr07 32 194 434426 434588 F 163 100.00 201 accept_chi 0 ALIGNMENT 41 YS2-15g04.q1k vc_4 206 246 5831 5871 F 41 100.00 246 reject_low 5 ALIGNMENT 0 YS2-15g04.q1k vc_4 62 205 5831 5830 F 144 0.00 246 reject_low 5 ALIGNMENT 0 YS2-15g04.q1k chr07 246 206 434427 434426 C 41 0.00 246 accept_chi 1 ALIGNMENT 0 YS2-15g04.q1k vc_1 205 62 2513 2512 C 144 0.00 246 reject_low 2 ALIGNMENT 0 YS2-15g04.q1k vc_2 205 62 2146 2145 C 144 0.00 246 reject_low 3 ALIGNMENT 0 YS2-15g04.q1k vc_3 205 62 2513 2512 C 144 0.00 246 reject_low 4 ALIGNMENT 41 YS2-15g04.q1k vc_1 246 206 2472 2512 C 41 100.00 246 reject_low 2 ALIGNMENT 41 YS2-15g04.q1k vc_2 246 206 2105 2145 C 41 100.00 246 reject_low 3 ALIGNMENT 155 YS2-15g04.q1k chr07 205 44 434426 434588 C 162 99.38 246 accept_chi 1 ALIGNMENT 0 YS2-15g04.q1k vc_5 207 62 37 36 C 146 0.00 246 reject_low 8 ALIGNMENT 36 YS2-15g04.q1k vc_5 243 208 1 36 C 36 100.00 246 reject_low 8 ALIGNMENT 0 YS2-15g06.p1k chr12 59 58 460193 460208 F 0 0.00 1375 reject_bad_break 0 ALIGNMENT 22 YS2-15g06.p1k chr12 36 58 460170 460192 F 23 100.00 1375 reject_bad_break 0 ALIGNMENT 492 YS2-15g06.p1k chr12 398 1046 451419 452090 F 649 93.84 1375 reject_low 1 ALIGNMENT 773 YS2-15g06.p1k chr12 59 1046 460209 461227 F 988 94.53 1375 reject_bad_break 0 ALIGNMENT 0 YS2-15g06.p1k chr12 62 397 451419 451418 F 336 0.00 1375 reject_low 1 ALIGNMENT 207 YS2-15g06.p1k chr12 753 1046 489754 490058 F 294 91.50 1375 reject_low 2 ALIGNMENT 990 YS2-15g06.q1k chr12 1156 40 463354 464474 C 1117 96.15 1359 reject_bad_break 0 ALIGNMENT 990 YS2-15g06.q1k chr12 1156 40 454217 455337 C 1117 96.15 1359 reject_low 1 ALIGNMENT 0 YS2-15g06.p1k chr12 62 752 489754 489753 F 691 0.00 1375 reject_low 2 ALIGNMENT 885 YS2-15g08.p1k chr12 44 1023 463269 464264 F 980 97.04 1306 accept 1 ALIGNMENT 671 YS2-15g08.q1k chr12 1084 45 458391 459409 C 1040 91.73 1294 accept 0 ALIGNMENT 89 YS2-15g08.q1k chr06 45 146 31628 31729 F 102 98.04 1294 reject_low 2 ALIGNMENT 885 YS2-15g08.p1k chr12 44 1023 454132 455127 F 980 97.04 1306 accept 0 ALIGNMENT 0 YS2-15g08.q1k chr06 147 871 31729 31728 F 725 0.00 1294 reject_low 2 ALIGNMENT 671 YS2-15g08.q1k chr12 1084 45 467528 468546 C 1040 91.73 1294 accept 1 ALIGNMENT 0 YS2-15g09.q1k vc_5 377 62 37 36 C 316 0.00 416 reject_low 7 ALIGNMENT 42 YS2-15g09.q1k vc_4 372 416 5827 5871 F 45 97.78 416 reject_low 4 ALIGNMENT 36 YS2-15g09.q1k vc_5 413 378 1 36 C 36 100.00 416 reject_low 7 ALIGNMENT 334 YS2-15g09.q1k chr10 375 28 351078 351426 C 348 99.71 416 accept_chi 1 ALIGNMENT 39 YS2-15g09.q1k vc_5 416 378 5025 5063 C 39 100.00 416 reject_low 5 ALIGNMENT 0 YS2-15g09.q1k vc_7 62 378 13525 13524 F 317 0.00 416 reject_low 6 ALIGNMENT 42 YS2-15g09.q1k vc_1 416 372 2472 2516 C 45 97.78 416 reject_low 2 ALIGNMENT 0 YS2-15g09.q1k vc_3 371 62 2517 2516 C 310 0.00 416 reject_low 3 ALIGNMENT 0 YS2-15g09.q1k vc_4 62 371 5827 5826 F 310 0.00 416 reject_low 4 ALIGNMENT 38 YS2-15g09.q1k vc_7 379 416 13525 13562 F 38 100.00 416 reject_low 6 ALIGNMENT 339 YS2-15g09.p1k chr10 33 381 351078 351426 F 349 100.00 400 accept_chi 0 ALIGNMENT 42 YS2-15g09.q1k vc_3 416 372 2472 2516 C 45 97.78 416 reject_low 3 ALIGNMENT 0 YS2-15g09.p1k chr10 382 400 351426 351425 F 19 0.00 400 accept_chi 0 ALIGNMENT 0 YS2-15g09.q1k vc_5 377 62 5064 5063 C 316 0.00 416 reject_low 5 ALIGNMENT 0 YS2-15g09.q1k vc_1 371 62 2517 2516 C 310 0.00 416 reject_low 2 ALIGNMENT 0 YS2-15g09.q1k chr10 416 376 351079 351078 C 41 0.00 416 accept_chi 1 ALIGNMENT 995 YS2-15g10.p1k chr10 35 1186 41553 42708 F 1152 96.70 1255 accept 0 ALIGNMENT 989 YS2-15g10.q1k chr10 1191 31 45340 46516 C 1161 96.21 1341 accept 0 ALIGNMENT 1065 YS2-15g14.p1k chr03 1212 27 212223 213425 C 1186 96.96 1228 accept 0 ALIGNMENT 961 YS2-15g14.q1k chr03 38 1180 211753 212924 F 1143 94.84 1345 accept 0 ALIGNMENT 0 YS2-15g15.q1k chr06 266 225 137985 137984 C 42 0.00 266 reject_low 81 ALIGNMENT 0 YS2-15g15.p1k chr14 222 239 519258 519257 F 18 0.00 239 reject_low 73 ALIGNMENT 0 YS2-15g15.p1k chr03 62 159 149513 149512 F 98 0.00 239 reject_low 13 ALIGNMENT 89 YS2-15g15.p1k chr14 127 221 524730 524824 F 95 100.00 239 reject_low 77 ALIGNMENT 34 YS2-15g15.p1k chr03 221 127 142982 143077 C 95 81.05 239 ambiguous_trans_ua 1 ALIGNMENT 24 YS2-15g15.p1k chr12 34 114 941265 941346 F 81 80.25 239 reject_low 12 ALIGNMENT 24 YS2-15g15.p1k chr04 114 34 878474 878555 C 81 80.25 239 reject_low 57 ALIGNMENT 0 YS2-15g15.q1k chr14 266 137 519160 519159 C 130 0.00 266 reject_low 16 ALIGNMENT 92 YS2-15g15.p1k chr15 221 117 709930 710033 C 105 99.05 239 reject_low 17 ALIGNMENT 0 YS2-15g15.p1k chr04 239 222 987384 987383 C 18 0.00 239 reject_low 85 ALIGNMENT 0 YS2-15g15.p1k chr04 239 115 987321 987320 C 125 0.00 239 reject_low 58 ALIGNMENT 0 YS2-15g15.p1k chr14 239 222 562272 562271 C 18 0.00 239 reject_low 78 ALIGNMENT 0 YS2-15g15.q1k chr10 62 143 354934 354933 F 82 0.00 266 reject_low 48 ALIGNMENT 89 YS2-15g15.p1k chr07 127 221 811452 811546 F 95 100.00 239 reject_low 39 ALIGNMENT 0 YS2-15g15.p1k chr04 126 62 884216 884215 C 65 0.00 239 reject_low 37 ALIGNMENT 0 YS2-15g15.q1k chr03 266 186 149596 149595 C 81 0.00 266 reject_low 13 ALIGNMENT 0 YS2-15g15.p1k chr01 239 222 160482 160481 C 18 0.00 239 reject_low 80 ALIGNMENT 90 YS2-15g15.q1k chr12 37 135 981602 981700 F 99 98.99 266 reject_low 18 ALIGNMENT 0 YS2-15g15.q1k chr05 143 62 487987 487986 C 82 0.00 266 reject_low 45 ALIGNMENT 0 YS2-15g15.q1k chr03 225 266 168852 168851 F 42 0.00 266 reject_low 7 ALIGNMENT 0 YS2-15g15.q1k chr10 266 226 204059 204058 C 41 0.00 266 ambiguous_trans_ua 3 ALIGNMENT 0 YS2-15g15.p1k chr04 94 239 992736 992735 F 146 0.00 239 reject_low 19 ALIGNMENT 89 YS2-15g15.q1k chr06 131 37 137908 138002 C 95 100.00 266 ambiguous_trans_ua 5 ALIGNMENT 86 YS2-15g15.q1k chr10 37 131 354997 355091 F 95 98.95 266 reject_low 35 ALIGNMENT 0 YS2-15g15.p1k chr06 222 239 138002 138001 F 18 0.00 239 reject_low 81 ALIGNMENT 0 YS2-15g15.p1k chr04 222 239 992695 992694 F 18 0.00 239 reject_low 74 ALIGNMENT 0 YS2-15g15.q1k chr04 266 225 871893 871892 C 42 0.00 266 reject_low 82 ALIGNMENT 0 YS2-15g15.q1k chr12 143 62 946974 946973 C 82 0.00 266 reject_low 12 ALIGNMENT 32 YS2-15g15.p1k chr01 127 197 183136 183206 F 71 84.51 239 reject_low 71 ALIGNMENT 0 YS2-15g15.p1k chr07 115 126 811610 817078 F 12 0.00 239 reject_low 86 ALIGNMENT 0 YS2-15g15.p1k chr06 115 239 138065 138064 F 125 0.00 239 reject_low 11 ALIGNMENT 24 YS2-15g15.q1k chr12 224 144 656488 656569 C 81 80.25 266 reject_low 50 ALIGNMENT 76 YS2-15g15.q1k chr03 132 225 124293 124386 F 94 96.81 266 ambiguous_trans_ua 0 ALIGNMENT 86 YS2-15g15.p1k chr05 221 127 431724 431818 C 95 98.95 239 reject_low 53 ALIGNMENT 0 YS2-15g15.q1k chr04 143 62 981323 981322 C 82 0.00 266 reject_low 43 ALIGNMENT 24 YS2-15g15.p1k chr15 114 34 704239 704320 C 81 80.25 239 reject_low 67 ALIGNMENT 0 YS2-15g15.q1k chr10 131 62 204152 204151 C 70 0.00 266 ambiguous_trans_ua 3 ALIGNMENT 91 YS2-15g15.q1k chr14 136 37 519159 519258 C 100 99.00 266 reject_low 16 ALIGNMENT 24 YS2-15g15.p1k chr06 34 114 137984 138065 F 81 80.25 239 reject_low 11 ALIGNMENT 27 YS2-15g15.q1k chr03 98 45 149513 149566 C 54 85.19 266 reject_low 72 ALIGNMENT 0 YS2-15g15.q1k chr12 143 132 650984 656411 C 12 0.00 266 reject_low 83 ALIGNMENT 0 YS2-15g15.q1k chr04 143 132 871974 877442 C 12 0.00 266 reject_low 82 ALIGNMENT 0 YS2-15g15.q1k chr05 266 225 487906 487905 C 42 0.00 266 reject_low 45 ALIGNMENT 89 YS2-15g15.p1k chr05 221 127 135845 135939 C 95 100.00 239 reject_low 38 ALIGNMENT 0 YS2-15g15.p1k chr03 127 239 151686 151685 F 113 0.00 239 reject_low 9 ALIGNMENT 0 YS2-15g15.q1k chr03 133 62 149647 149646 C 72 0.00 266 reject_low 13 ALIGNMENT 24 YS2-15g15.p1k chr04 114 34 884058 884139 C 81 80.25 239 reject_low 84 ALIGNMENT 0 YS2-15g15.q1k chr03 131 62 151687 151686 C 70 0.00 266 reject_low 14 ALIGNMENT 0 YS2-15g15.p1k chr03 222 239 151612 151611 F 18 0.00 239 reject_low 14 ALIGNMENT 24 YS2-15g15.p1k chr15 114 34 709867 709948 C 81 80.25 239 reject_low 87 ALIGNMENT 27 YS2-15g15.p1k chr03 160 213 149513 149566 F 54 85.19 239 reject_low 13 ALIGNMENT 0 YS2-15g15.q1k chr10 132 266 204035 204034 F 135 0.00 266 reject_low 29 ALIGNMENT 0 YS2-15g15.q1k chr03 62 133 142910 142909 F 72 0.00 266 ambiguous_trans_ua 1 ALIGNMENT 0 YS2-15g15.p1k chr04 239 115 878475 878474 C 125 0.00 239 reject_low 57 ALIGNMENT 0 YS2-15g15.q1k chr08 225 266 389436 389435 F 42 0.00 266 reject_low 46 ALIGNMENT 0 YS2-15g15.q1k chr05 266 133 487829 487828 C 134 0.00 266 reject_low 20 ALIGNMENT 0 YS2-15g15.p1k chr05 239 115 135783 135782 C 125 0.00 239 reject_low 59 ALIGNMENT 90 YS2-15g15.p1k chr14 221 126 567899 567994 C 96 100.00 239 ambiguous_trans 4 ALIGNMENT 35 YS2-15g15.q1k chr03 131 37 151518 151612 C 95 82.11 266 reject_low 33 ALIGNMENT 0 YS2-15g15.q1k chr04 143 62 877601 877600 C 82 0.00 266 reject_low 42 ALIGNMENT 24 YS2-15g15.p1k chr04 114 34 992479 992560 C 81 80.25 239 reject_low 85 ALIGNMENT 0 YS2-15g15.q1k chr14 225 266 562289 562288 F 42 0.00 266 reject_low 78 ALIGNMENT 0 YS2-15g15.q1k chr14 143 62 524888 524887 C 82 0.00 266 reject_low 77 ALIGNMENT 0 YS2-15g15.q1k chr06 143 62 143693 143692 C 82 0.00 266 reject_low 11,32 ALIGNMENT 0 YS2-15g15.p1k chr05 126 62 135940 135939 C 65 0.00 239 reject_low 38 ALIGNMENT 24 YS2-15g15.q1k chr10 144 224 203878 203959 F 81 80.25 266 reject_low 47 ALIGNMENT 24 YS2-15g15.p1k chr09 34 114 246293 246374 F 81 80.25 239 reject_low 63 ALIGNMENT 90 YS2-15g15.q1k chr13 37 132 168587 168682 F 96 100.00 266 reject_low 22 ALIGNMENT 0 YS2-15g15.q1k chr14 62 143 562208 562207 F 82 0.00 266 reject_low 78 ALIGNMENT 0 YS2-15g15.q1k chr12 266 132 941190 941189 C 135 0.00 266 reject_low 31 ALIGNMENT 0 YS2-15g15.q1k chr01 225 266 160499 160498 F 42 0.00 266 reject_low 80 ALIGNMENT 0 YS2-15g15.p1k chr14 222 239 524824 524823 F 18 0.00 239 reject_low 77 ALIGNMENT 0 YS2-15g15.p1k chr03 125 62 124464 124463 C 64 0.00 239 ambiguous_trans_ua 0 ALIGNMENT 24 YS2-15g15.q1k chr12 224 144 941265 941346 C 81 80.25 266 reject_low 76 ALIGNMENT 0 YS2-15g15.p1k chr12 115 239 941346 941345 F 125 0.00 239 reject_low 12 ALIGNMENT 0 YS2-15g15.p1k chr14 125 62 567995 567994 C 64 0.00 239 ambiguous_trans 4 ALIGNMENT 0 YS2-15g15.q1k chr10 132 266 355091 355090 F 135 0.00 266 reject_low 35 ALIGNMENT 24 YS2-15g15.q1k chr14 144 224 562208 562289 F 81 80.25 266 reject_low 78 ALIGNMENT 0 YS2-15g15.q1k chr14 133 266 567994 567993 F 134 0.00 266 reject_low 23 ALIGNMENT 89 YS2-15g15.p1k chr04 221 127 651320 651414 C 95 100.00 239 reject_low 36 ALIGNMENT 0 YS2-15g15.q1k chr14 225 266 567917 567916 F 42 0.00 266 ambiguous_trans 4 ALIGNMENT 0 YS2-15g15.p1k chr03 239 127 124294 124293 C 113 0.00 239 reject_low 8 ALIGNMENT 89 YS2-15g15.p1k chr14 221 127 726852 726946 C 95 100.00 239 reject_low 41 ALIGNMENT 0 YS2-15g15.q1k chr06 143 132 138066 143534 C 12 0.00 266 reject_low 81 ALIGNMENT 84 YS2-15g15.q1k chr01 37 135 166069 166167 F 99 96.97 266 reject_low 34 ALIGNMENT 89 YS2-15g15.q1k chr06 131 37 143535 143629 C 95 100.00 266 reject_low 81 ALIGNMENT 0 YS2-15g15.q1k chr12 266 133 650826 650825 C 134 0.00 266 reject_low 21 ALIGNMENT 0 YS2-15g15.q1k chr13 133 266 168682 168681 F 134 0.00 266 reject_low 22 ALIGNMENT 89 YS2-15g15.q1k chr04 131 37 871816 871910 C 95 100.00 266 reject_low 26 ALIGNMENT 0 YS2-15g15.p1k chr09 62 126 246217 246216 F 65 0.00 239 reject_low 40 ALIGNMENT 0 YS2-15g15.p1k chr15 126 115 704397 709866 C 12 0.00 239 reject_low 87 ALIGNMENT 0 YS2-15g15.p1k chr05 239 222 431725 431724 C 18 0.00 239 reject_low 53 ALIGNMENT 0 YS2-15g15.p1k chr12 62 126 941189 941188 F 65 0.00 239 reject_low 76 ALIGNMENT 89 YS2-15g15.p1k chr12 127 221 941189 941283 F 95 100.00 239 reject_low 76 ALIGNMENT 0 YS2-15g15.p1k chr04 239 222 878538 878537 C 18 0.00 239 reject_low 84 ALIGNMENT 0 YS2-15g15.p1k chr14 239 115 562209 562208 C 125 0.00 239 reject_low 65 ALIGNMENT 24 YS2-15g15.p1k chr07 34 114 817155 817236 F 81 80.25 239 reject_low 62 ALIGNMENT 0 YS2-15g15.q1k chr06 266 132 137909 137908 C 135 0.00 266 ambiguous_trans_ua 5 ALIGNMENT 28 YS2-15g15.p1k chr03 73 124 149595 149646 F 52 90.38 239 reject_low 14,33 ALIGNMENT 0 YS2-15g15.p1k chr03 125 126 149647 151517 F 2 0.00 239 reject_low 14 ALIGNMENT 24 YS2-15g15.q1k chr04 224 144 877519 877600 C 81 80.25 266 reject_low 42 ALIGNMENT 0 YS2-15g15.q1k chr03 62 131 124293 124292 F 70 0.00 266 ambiguous_trans_ua 0 ALIGNMENT 0 YS2-15g15.p1k chr15 116 62 710034 710033 C 55 0.00 239 reject_low 17 ALIGNMENT 24 YS2-15g15.p1k chr04 114 34 651257 651338 C 81 80.25 239 reject_low 56 ALIGNMENT 0 YS2-15g15.p1k chr01 198 239 183206 183205 F 42 0.00 239 reject_low 71 ALIGNMENT 0 YS2-15g15.p1k chr04 239 222 992543 992542 C 18 0.00 239 reject_low 24 ALIGNMENT 0 YS2-15g15.q1k chr14 266 225 519241 519240 C 42 0.00 266 reject_low 73 ALIGNMENT 89 YS2-15g15.p1k chr06 127 221 143535 143629 F 95 100.00 239 reject_low 32 ALIGNMENT 0 YS2-15g15.q1k chr10 132 266 541341 541340 F 135 0.00 266 reject_low 30 ALIGNMENT 0 YS2-15g15.q1k chr04 266 132 1352635 1352634 C 135 0.00 266 reject_low 28 ALIGNMENT 24 YS2-15g15.q1k chr04 224 144 1352710 1352791 C 81 80.25 266 reject_low 44 ALIGNMENT 91 YS2-15g15.p1k chr14 122 221 519159 519258 F 100 99.00 239 reject_low 73 ALIGNMENT 0 YS2-15g15.q1k chr06 266 225 143612 143611 C 42 0.00 266 reject_low 11,32 ALIGNMENT 0 YS2-15g15.q1k chr10 62 143 203878 203877 F 82 0.00 266 reject_low 47 ALIGNMENT 90 YS2-15g15.p1k chr04 221 119 992542 992644 C 103 98.06 239 reject_low 24 ALIGNMENT 0 YS2-15g15.p1k chr14 115 126 519322 524729 F 12 0.00 239 reject_low 77 ALIGNMENT 28 YS2-15g15.q1k chr03 185 134 149595 149646 C 52 90.38 266 reject_low 13 ALIGNMENT 0 YS2-15g15.q1k chr10 266 78 204037 204036 C 189 0.00 266 reject_low 75 ALIGNMENT 24 YS2-15g15.p1k chr03 114 34 168771 168852 C 81 80.25 239 reject_low 55 ALIGNMENT 0 YS2-15g15.p1k chr06 127 239 137819 137818 F 113 0.00 239 ambiguous_trans_ua 5 ALIGNMENT 0 YS2-15g15.p1k chr04 126 62 651415 651414 C 65 0.00 239 reject_low 36 ALIGNMENT 0 YS2-15g15.p1k chr01 127 126 183306 189419 F 0 0.00 239 reject_low 79 ALIGNMENT 0 YS2-15g15.p1k chr04 239 222 651321 651320 C 18 0.00 239 reject_low 36 ALIGNMENT 24 YS2-15g15.q1k chr14 224 144 519240 519321 C 81 80.25 266 reject_low 73 ALIGNMENT 42 YS2-15g15.p1k chr04 33 93 992676 992736 F 61 91.80 239 reject_low 19 ALIGNMENT 0 YS2-15g15.p1k chr03 126 62 143078 143077 C 65 0.00 239 ambiguous_trans_ua 1 ALIGNMENT 0 YS2-15g15.q1k chr01 62 143 160418 160417 F 82 0.00 266 reject_low 80 ALIGNMENT 0 YS2-15g15.q1k chr08 62 143 389355 389354 F 82 0.00 266 reject_low 46 ALIGNMENT 0 YS2-15g15.q1k chr14 132 143 562366 567835 F 12 0.00 266 ambiguous_trans 4 ALIGNMENT 64 YS2-15g15.p1k chr01 33 126 183212 183305 F 94 92.55 239 reject_low 79 ALIGNMENT 0 YS2-15g15.p1k chr01 122 62 166168 166167 C 61 0.00 239 ambiguous_trans 6 ALIGNMENT 0 YS2-15g15.q1k chr12 225 266 981620 981619 F 42 0.00 266 reject_low 51 ALIGNMENT 0 YS2-15g15.q1k chr13 62 143 168524 168523 F 82 0.00 266 reject_low 52 ALIGNMENT 24 YS2-15g15.q1k chr06 224 144 143611 143692 C 81 80.25 266 reject_low 11,32 ALIGNMENT 92 YS2-15g15.q1k chr08 37 141 389418 389521 F 105 99.05 266 reject_low 15 ALIGNMENT 0 YS2-15g15.p1k chr14 239 222 726853 726852 C 18 0.00 239 reject_low 41 ALIGNMENT 89 YS2-15g15.p1k chr03 221 127 168834 168928 C 95 100.00 239 reject_low 7 ALIGNMENT 24 YS2-15g15.q1k chr01 144 224 166006 166087 F 81 80.25 266 ambiguous_trans 6 ALIGNMENT 0 YS2-15g15.p1k chr03 214 239 149566 149565 F 26 0.00 239 reject_low 13 ALIGNMENT 0 YS2-15g15.p1k chr12 222 239 941283 941282 F 18 0.00 239 reject_low 76 ALIGNMENT 24 YS2-15g15.q1k chr14 224 144 524806 524887 C 81 80.25 266 reject_low 77 ALIGNMENT 90 YS2-15g15.q1k chr12 132 37 650825 650920 C 96 100.00 266 reject_low 21 ALIGNMENT 0 YS2-15g15.q1k chr01 225 266 166087 166086 F 42 0.00 266 ambiguous_trans 6 ALIGNMENT 38 YS2-15g15.q1k chr03 37 132 124367 124463 F 96 82.29 266 reject_low 69 ALIGNMENT 24 YS2-15g15.p1k chr14 34 114 524806 524887 F 81 80.25 239 reject_low 64 ALIGNMENT 0 YS2-15g15.p1k chr04 118 62 992645 992644 C 57 0.00 239 reject_low 24 ALIGNMENT 0 YS2-15g15.q1k chr12 266 225 941266 941265 C 42 0.00 266 reject_low 76 ALIGNMENT 24 YS2-15g15.q1k chr03 144 224 168771 168852 F 81 80.25 266 reject_low 7 ALIGNMENT 0 YS2-15g15.p1k chr14 126 115 562366 567835 C 12 0.00 239 reject_low 78 ALIGNMENT 0 YS2-15g15.p1k chr15 239 115 704240 704239 C 125 0.00 239 reject_low 67 ALIGNMENT 0 YS2-15g15.q1k chr03 266 132 151519 151518 C 135 0.00 266 reject_low 33 ALIGNMENT 89 YS2-15g15.p1k chr15 221 127 704302 704396 C 95 100.00 239 reject_low 87 ALIGNMENT 89 YS2-15g15.p1k chr07 127 221 817079 817173 F 95 100.00 239 reject_low 86 ALIGNMENT 89 YS2-15g15.p1k chr04 221 127 878537 878631 C 95 100.00 239 reject_low 84 ALIGNMENT 24 YS2-15g15.q1k chr08 144 224 389355 389436 F 81 80.25 266 reject_low 46 ALIGNMENT 24 YS2-15g15.q1k chr01 144 224 160418 160499 F 81 80.25 266 reject_low 80 ALIGNMENT 0 YS2-15g15.p1k chr04 239 115 651258 651257 C 125 0.00 239 reject_low 56 ALIGNMENT 24 YS2-15g15.p1k chr07 34 114 811528 811609 F 81 80.25 239 reject_low 86 ALIGNMENT 0 YS2-15g15.p1k chr03 239 222 142983 142982 C 18 0.00 239 ambiguous_trans_ua 1 ALIGNMENT 0 YS2-15g15.q1k chr04 266 132 871817 871816 C 135 0.00 266 reject_low 26 ALIGNMENT 0 YS2-15g15.p1k chr09 222 239 246311 246310 F 18 0.00 239 reject_low 40 ALIGNMENT 22 YS2-15g15.p1k chr01 73 114 189535 189577 F 42 90.48 239 reject_low 68 ALIGNMENT 76 YS2-15g15.q1k chr06 225 132 137726 137819 C 94 96.81 266 ambiguous_trans_ua 2 ALIGNMENT 35 YS2-15g15.p1k chr03 127 221 151518 151612 F 95 82.11 239 reject_low 14 ALIGNMENT 0 YS2-15g15.p1k chr04 126 115 878632 884057 C 12 0.00 239 reject_low 84 ALIGNMENT 24 YS2-15g15.p1k chr14 114 34 726789 726870 C 81 80.25 239 reject_low 66 ALIGNMENT 76 YS2-15g15.p1k chr03 33 126 151593 151686 F 94 96.81 239 reject_low 9 ALIGNMENT 0 YS2-15g15.p1k chr07 62 126 811452 811451 F 65 0.00 239 reject_low 39 ALIGNMENT 0 YS2-15g15.q1k chr08 142 266 389521 389520 F 125 0.00 266 reject_low 15 ALIGNMENT 0 YS2-15g15.q1k chr12 266 225 650903 650902 C 42 0.00 266 reject_low 83 ALIGNMENT 0 YS2-15g15.q1k chr14 266 225 524807 524806 C 42 0.00 266 reject_low 77 ALIGNMENT 0 YS2-15g15.p1k chr15 239 222 709931 709930 C 18 0.00 239 reject_low 17 ALIGNMENT 0 YS2-15g15.p1k chr01 239 222 166070 166069 C 18 0.00 239 ambiguous_trans 6 ALIGNMENT 89 YS2-15g15.q1k chr10 37 131 541247 541341 F 95 100.00 266 reject_low 30 ALIGNMENT 90 YS2-15g15.q1k chr14 37 132 567899 567994 F 96 100.00 266 reject_low 23 ALIGNMENT 0 YS2-15g15.p1k chr04 62 177 992651 992650 F 116 0.00 239 reject_low 74 ALIGNMENT 73 YS2-15g15.p1k chr03 124 33 142910 143001 C 92 96.74 239 reject_low 10 ALIGNMENT 24 YS2-15g15.p1k chr04 114 34 987320 987401 C 81 80.25 239 reject_low 58 ALIGNMENT 38 YS2-15g15.p1k chr03 221 126 124367 124463 C 96 82.29 239 ambiguous_trans_ua 0 ALIGNMENT 0 YS2-15g15.p1k chr07 115 239 817236 817235 F 125 0.00 239 reject_low 62 ALIGNMENT 89 YS2-15g15.q1k chr10 37 131 203941 204035 F 95 100.00 266 reject_low 29 ALIGNMENT 86 YS2-15g15.p1k chr01 127 221 189420 189514 F 95 98.95 239 reject_low 79 ALIGNMENT 0 YS2-15g15.q1k chr01 132 143 160576 166005 F 12 0.00 266 ambiguous_trans 6 ALIGNMENT 0 YS2-15g15.q1k chr14 143 132 519322 524729 C 12 0.00 266 reject_low 73 ALIGNMENT 24 YS2-15g15.q1k chr05 224 144 487905 487986 C 81 80.25 266 reject_low 45 ALIGNMENT 0 YS2-15g15.p1k chr04 126 115 987478 992478 C 12 0.00 239 reject_low 85 ALIGNMENT 24 YS2-15g15.p1k chr14 114 34 567836 567917 C 81 80.25 239 reject_low 78 ALIGNMENT 0 YS2-15g15.p1k chr04 239 222 884122 884121 C 18 0.00 239 reject_low 37 ALIGNMENT 0 YS2-15g15.q1k chr10 225 266 355015 355014 F 42 0.00 266 reject_low 48 ALIGNMENT 0 YS2-15g15.q1k chr12 136 266 981700 981699 F 131 0.00 266 reject_low 18 ALIGNMENT 0 YS2-15g15.p1k chr06 127 126 137820 137907 F 0 0.00 239 reject_low 81 ALIGNMENT 0 YS2-15g15.q1k chr03 132 266 143077 143076 F 135 0.00 266 reject_low 70 ALIGNMENT 0 YS2-15g15.q1k chr03 133 266 124463 124462 F 134 0.00 266 reject_low 69 ALIGNMENT 24 YS2-15g15.q1k chr14 144 224 567836 567917 F 81 80.25 266 ambiguous_trans 4 ALIGNMENT 89 YS2-15g15.q1k chr04 131 37 877443 877537 C 95 100.00 266 reject_low 82 ALIGNMENT 0 YS2-15g15.p1k chr06 127 126 137820 143534 F 0 0.00 239 reject_low 32 ALIGNMENT 0 YS2-15g15.p1k chr14 239 222 567900 567899 C 18 0.00 239 ambiguous_trans 4 ALIGNMENT 89 YS2-15g15.q1k chr12 131 37 946816 946910 C 95 100.00 266 reject_low 76 ALIGNMENT 24 YS2-15g15.q1k chr04 224 144 871892 871973 C 81 80.25 266 reject_low 82 ALIGNMENT 0 YS2-15g15.p1k chr15 239 222 704303 704302 C 18 0.00 239 reject_low 87 ALIGNMENT 0 YS2-15g15.p1k chr14 115 239 524887 524886 F 125 0.00 239 reject_low 64 ALIGNMENT 76 YS2-15g15.p1k chr06 33 126 137726 137819 F 94 96.81 239 ambiguous_trans_ua 5 reject_low 32,81 ALIGNMENT 90 YS2-15g15.q1k chr05 132 37 487828 487923 C 96 100.00 266 reject_low 20 ALIGNMENT 89 YS2-15g15.q1k chr04 131 37 981165 981259 C 95 100.00 266 reject_low 27 ALIGNMENT 24 YS2-15g15.q1k chr04 224 144 981241 981322 C 81 80.25 266 reject_low 43 ALIGNMENT 24 YS2-15g15.q1k chr12 224 144 650902 650983 C 81 80.25 266 reject_low 83 ALIGNMENT 76 YS2-15g15.q1k chr03 225 132 151593 151686 C 94 96.81 266 reject_low 14 ALIGNMENT 89 YS2-15g15.q1k chr12 131 37 656412 656506 C 95 100.00 266 reject_low 83 ALIGNMENT 22 YS2-15g15.p1k chr04 178 221 992651 992695 F 44 86.36 239 reject_low 74 ALIGNMENT 0 YS2-15g15.q1k chr04 266 132 981166 981165 C 135 0.00 266 reject_low 27 ALIGNMENT 0 YS2-15g15.q1k chr13 225 266 168605 168604 F 42 0.00 266 reject_low 52 ALIGNMENT 0 YS2-15g15.p1k chr01 239 115 160419 160418 C 125 0.00 239 reject_low 54 ALIGNMENT 24 YS2-15g15.q1k chr10 144 224 354934 355015 F 81 80.25 266 reject_low 48 ALIGNMENT 24 YS2-15g15.p1k chr05 114 34 135782 135863 C 81 80.25 239 reject_low 59 ALIGNMENT 0 YS2-15g15.p1k chr05 239 222 135846 135845 C 18 0.00 239 reject_low 38 ALIGNMENT 0 YS2-15g15.p1k chr03 239 125 142911 142910 C 115 0.00 239 reject_low 10 ALIGNMENT 89 YS2-15g15.q1k chr03 37 131 168834 168928 F 95 100.00 266 reject_low 25 ALIGNMENT 0 YS2-15g15.p1k chr01 62 126 183136 183135 F 65 0.00 239 reject_low 71 ALIGNMENT 0 YS2-15g15.q1k chr12 266 225 656489 656488 C 42 0.00 266 reject_low 50 ALIGNMENT 24 YS2-15g15.p1k chr01 114 34 160418 160499 C 81 80.25 239 reject_low 54 ALIGNMENT 24 YS2-15g15.p1k chr14 34 114 519240 519321 F 81 80.25 239 reject_low 77 ALIGNMENT 0 YS2-15g15.q1k chr01 136 266 166167 166166 F 131 0.00 266 reject_low 34 ALIGNMENT 0 YS2-15g15.p1k chr07 222 239 811546 811545 F 18 0.00 239 reject_low 39 ALIGNMENT 89 YS2-15g15.q1k chr14 37 131 562271 562365 F 95 100.00 266 ambiguous_trans 4 ALIGNMENT 0 YS2-15g15.q1k chr04 266 225 1352711 1352710 C 42 0.00 266 reject_low 44 ALIGNMENT 89 YS2-15g15.p1k chr06 127 221 137908 138002 F 95 100.00 239 reject_low 81 ALIGNMENT 0 YS2-15g15.q1k chr06 131 62 137820 137819 C 70 0.00 266 ambiguous_trans_ua 2 ALIGNMENT 0 YS2-15g15.p1k chr03 239 222 124368 124367 C 18 0.00 239 ambiguous_trans_ua 0 ALIGNMENT 34 YS2-15g15.q1k chr03 37 131 142982 143077 F 95 81.05 266 reject_low 70 ALIGNMENT 0 YS2-15g15.q1k chr06 266 226 137727 137726 C 41 0.00 266 ambiguous_trans_ua 2 ALIGNMENT 0 YS2-15g15.q1k chr10 62 143 541184 541183 F 82 0.00 266 reject_low 49 ALIGNMENT 0 YS2-15g15.q1k chr03 226 266 143001 143000 F 41 0.00 266 ambiguous_trans_ua 1 ALIGNMENT 73 YS2-15g15.q1k chr03 134 225 142910 143001 F 92 96.74 266 ambiguous_trans_ua 1 ALIGNMENT 0 YS2-15g15.q1k chr03 226 266 124386 124385 F 41 0.00 266 ambiguous_trans_ua 0 ALIGNMENT 0 YS2-15g15.q1k chr03 132 266 168928 168927 F 135 0.00 266 reject_low 25 ALIGNMENT 0 YS2-15g15.q1k chr04 266 225 981242 981241 C 42 0.00 266 reject_low 43 ALIGNMENT 0 YS2-15g15.q1k chr12 143 132 941347 946815 C 12 0.00 266 reject_low 76 ALIGNMENT 89 YS2-15g15.q1k chr12 131 37 941189 941283 C 95 100.00 266 reject_low 31 ALIGNMENT 0 YS2-15g15.q1k chr04 143 62 1352792 1352791 C 82 0.00 266 reject_low 44 ALIGNMENT 76 YS2-15g15.p1k chr03 126 33 124293 124386 C 94 96.81 239 reject_low 8 ALIGNMENT 89 YS2-15g15.q1k chr14 131 37 524730 524824 C 95 100.00 266 reject_low 73 ALIGNMENT 89 YS2-15g15.p1k chr14 221 127 562271 562365 C 95 100.00 239 reject_low 78 ALIGNMENT 24 YS2-15g15.q1k chr12 224 144 946892 946973 C 81 80.25 266 reject_low 12 ALIGNMENT 0 YS2-15g15.p1k chr01 126 115 160576 166005 C 12 0.00 239 reject_low 80 ALIGNMENT 89 YS2-15g15.q1k chr04 131 37 1352634 1352728 C 95 100.00 266 reject_low 28 ALIGNMENT 0 YS2-15g15.p1k chr14 126 62 726947 726946 C 65 0.00 239 reject_low 41 ALIGNMENT 84 YS2-15g15.p1k chr01 221 123 166069 166167 C 99 96.97 239 ambiguous_trans 6 ALIGNMENT 0 YS2-15g15.p1k chr03 126 62 168929 168928 C 65 0.00 239 reject_low 7 ALIGNMENT 0 YS2-15g15.q1k chr12 143 62 656570 656569 C 82 0.00 266 reject_low 50 ALIGNMENT 24 YS2-15g15.p1k chr14 114 34 562208 562289 C 81 80.25 239 reject_low 65 ALIGNMENT 0 YS2-15g15.q1k chr10 225 266 541265 541264 F 42 0.00 266 reject_low 49 ALIGNMENT 24 YS2-15g15.p1k chr01 114 34 166006 166087 C 81 80.25 239 reject_low 80 ALIGNMENT 0 YS2-15g15.p1k chr03 239 222 168835 168834 C 18 0.00 239 reject_low 7 ALIGNMENT 83 YS2-15g15.p1k chr01 221 127 160481 160575 C 95 97.89 239 reject_low 80 ALIGNMENT 0 YS2-15g15.p1k chr14 62 121 519159 519158 F 60 0.00 239 reject_low 73 ALIGNMENT 0 YS2-15g15.p1k chr09 115 239 246374 246373 F 125 0.00 239 reject_low 63 ALIGNMENT 0 YS2-15g15.p1k chr03 125 239 149646 149645 F 115 0.00 239 reject_low 33 ALIGNMENT 0 YS2-15g15.q1k chr04 266 225 877520 877519 C 42 0.00 266 reject_low 42 ALIGNMENT 24 YS2-15g15.q1k chr13 144 224 168524 168605 F 81 80.25 266 reject_low 52 ALIGNMENT 0 YS2-15g15.p1k chr03 239 115 168772 168771 C 125 0.00 239 reject_low 55 ALIGNMENT 0 YS2-15g15.p1k chr05 126 62 431819 431818 C 65 0.00 239 reject_low 53 ALIGNMENT 24 YS2-15g15.q1k chr10 144 224 541184 541265 F 81 80.25 266 reject_low 49 ALIGNMENT 20 YS2-15g15.q1k chr10 77 37 204036 204077 C 41 85.37 266 reject_low 75 ALIGNMENT 0 YS2-15g15.p1k chr01 115 239 189577 189576 F 125 0.00 239 reject_low 68 ALIGNMENT 0 YS2-15g15.q1k chr12 266 225 946893 946892 C 42 0.00 266 reject_low 12 ALIGNMENT 24 YS2-15g15.p1k chr05 114 34 431661 431742 C 81 80.25 239 reject_low 60 ALIGNMENT 0 YS2-15g15.q1k chr03 266 226 151594 151593 C 41 0.00 266 reject_low 14 ALIGNMENT 24 YS2-15g15.q1k chr06 224 144 137984 138065 C 81 80.25 266 reject_low 81 ALIGNMENT 76 YS2-15g15.q1k chr10 225 132 204058 204151 C 94 96.81 266 ambiguous_trans_ua 3 ALIGNMENT 24 YS2-15g15.q1k chr12 144 224 981539 981620 F 81 80.25 266 reject_low 51 ALIGNMENT 0 YS2-15g15.q1k chr03 62 143 168771 168770 F 82 0.00 266 reject_low 7 ALIGNMENT 0 YS2-15g15.p1k chr05 239 115 431662 431661 C 125 0.00 239 reject_low 60 ALIGNMENT 0 YS2-15g15.q1k chr12 62 143 981539 981538 F 82 0.00 266 reject_low 51 ALIGNMENT 0 YS2-15g15.p1k chr06 222 239 143629 143628 F 18 0.00 239 reject_low 32 ALIGNMENT 0 YS2-15g15.p1k chr07 222 239 817173 817172 F 18 0.00 239 reject_low 86 ALIGNMENT 89 YS2-15g15.p1k chr04 221 127 884121 884215 C 95 100.00 239 reject_low 37 ALIGNMENT 89 YS2-15g15.p1k chr04 221 127 987383 987477 C 95 100.00 239 reject_low 85 ALIGNMENT 0 YS2-15g15.p1k chr14 239 115 726790 726789 C 125 0.00 239 reject_low 66 ALIGNMENT 83 YS2-15g15.q1k chr01 37 131 160481 160575 F 95 97.89 266 ambiguous_trans 6 ALIGNMENT 0 YS2-15g15.q1k chr10 225 266 203959 203958 F 42 0.00 266 reject_low 47 ALIGNMENT 0 YS2-15g15.p1k chr01 222 239 189514 189513 F 18 0.00 239 reject_low 79 ALIGNMENT 0 YS2-15g15.p1k chr06 115 239 143692 143691 F 125 0.00 239 reject_low 61 ALIGNMENT 89 YS2-15g15.p1k chr09 127 221 246217 246311 F 95 100.00 239 reject_low 40 ALIGNMENT 24 YS2-15g15.p1k chr06 34 114 143611 143692 F 81 80.25 239 reject_low 61 ALIGNMENT 0 YS2-15g15.q1k chr03 266 99 149514 149513 C 168 0.00 266 reject_low 72 ALIGNMENT 41 YS2-15g16.q1k vc_2 439 399 2105 2145 C 41 100.00 439 reject_low 3 ALIGNMENT 0 YS2-15g16.q1k vc_3 398 62 2513 2512 C 337 0.00 439 reject_low 4 ALIGNMENT 38 YS2-15g16.q1k vc_7 402 439 13525 13562 F 38 100.00 439 reject_low 7 ALIGNMENT 0 YS2-15g16.q1k vc_2 398 62 2146 2145 C 337 0.00 439 reject_low 3 ALIGNMENT 41 YS2-15g16.q1k vc_1 439 399 2472 2512 C 41 100.00 439 reject_low 2 ALIGNMENT 350 YS2-15g16.p1k chr02 393 37 709555 709911 C 357 100.00 410 accept_chi 0 ALIGNMENT 41 YS2-15g16.q1k vc_3 439 399 2472 2512 C 41 100.00 439 reject_low 4 ALIGNMENT 0 YS2-15g16.q1k vc_7 62 401 13525 13524 F 340 0.00 439 reject_low 7 ALIGNMENT 0 YS2-15g16.q1k vc_4 62 398 5831 5830 F 337 0.00 439 reject_low 5 ALIGNMENT 0 YS2-15g16.q1k vc_1 398 62 2513 2512 C 337 0.00 439 reject_low 2 ALIGNMENT 0 YS2-15g16.q1k chr02 399 439 709916 709915 F 41 0.00 439 accept_chi 1 ALIGNMENT 0 YS2-15g16.p1k chr02 410 394 709556 709555 C 17 0.00 410 accept_chi 0 ALIGNMENT 41 YS2-15g16.q1k vc_4 399 439 5831 5871 F 41 100.00 439 reject_low 5 ALIGNMENT 36 YS2-15g16.q1k vc_5 436 401 1 36 C 36 100.00 439 reject_low 8 ALIGNMENT 39 YS2-15g16.q1k vc_5 439 401 5025 5063 C 39 100.00 439 reject_low 6 ALIGNMENT 0 YS2-15g16.q1k vc_5 400 62 5064 5063 C 339 0.00 439 reject_low 6 ALIGNMENT 0 YS2-15g16.q1k vc_5 400 62 37 36 C 339 0.00 439 reject_low 8 ALIGNMENT 350 YS2-15g16.q1k chr02 38 398 709555 709916 F 361 99.72 439 accept_chi 1 ALIGNMENT 1014 YS2-15g17.p1k chr15 32 1167 560681 561830 F 1136 97.18 1274 accept 0 ALIGNMENT 888 YS2-15g17.q1k chr15 1099 36 565687 566762 C 1064 95.86 1276 accept 0 ALIGNMENT 259 YS2-15g18.q1k chr01 22 290 220121 220390 F 269 98.88 330 ambiguous_tel 1 ALIGNMENT 390 YS2-15g18.p1k vc_6 1 539 3712 4258 F 539 92.02 606 reject_vc 8 ALIGNMENT 393 YS2-15g18.p1k vc_7 1 594 456 1062 F 594 90.07 606 reject_vc 6 ALIGNMENT 0 YS2-15g18.q1k vc_1 288 62 2514 2513 C 227 0.00 330 reject_low 9 ALIGNMENT 0 YS2-15g18.q1k chr08 291 330 541001 541000 F 40 0.00 330 ambiguous_tel 0 ALIGNMENT 402 YS2-15g18.p1k vc_5 594 1 4063 4669 C 594 90.40 606 reject_vc 2 ALIGNMENT 0 YS2-15g18.q1k vc_4 62 288 5830 5829 F 227 0.00 330 reject_low 11 ALIGNMENT 393 YS2-15g18.p1k vc_7 1 594 13918 14524 F 594 90.07 606 reject_vc 7 ALIGNMENT 42 YS2-15g18.q1k vc_4 289 330 5830 5871 F 42 100.00 330 reject_low 11 ALIGNMENT 0 YS2-15g18.q1k chr01 291 330 220390 220389 F 40 0.00 330 ambiguous_tel 1 ALIGNMENT 0 YS2-15g18.q1k vc_3 288 62 2514 2513 C 227 0.00 330 reject_low 10 ALIGNMENT 42 YS2-15g18.q1k vc_3 330 289 2472 2513 C 42 100.00 330 reject_low 10 ALIGNMENT 0 YS2-15g18.q1k vc_5 291 62 5064 5063 C 230 0.00 330 reject_low 12 ALIGNMENT 399 YS2-15g18.p1k vc_3 594 1 1143 1749 C 594 90.24 606 reject_vc 5 ALIGNMENT 399 YS2-15g18.p1k vc_2 594 1 1143 1749 C 594 90.24 606 reject_vc 4 ALIGNMENT 0 YS2-15g18.q1k vc_5 291 62 37 36 C 230 0.00 330 reject_low 14 ALIGNMENT 36 YS2-15g18.q1k vc_5 327 292 1 36 C 36 100.00 330 reject_low 14 ALIGNMENT 42 YS2-15g18.q1k vc_1 330 289 2472 2513 C 42 100.00 330 reject_low 9 ALIGNMENT 399 YS2-15g18.p1k vc_1 594 1 1143 1749 C 594 90.24 606 reject_vc 3 ALIGNMENT 39 YS2-15g18.q1k vc_5 330 292 5025 5063 C 39 100.00 330 reject_low 12 ALIGNMENT 265 YS2-15g18.q1k chr08 22 290 540732 541001 F 269 99.63 330 ambiguous_tel 0 ALIGNMENT 38 YS2-15g18.q1k vc_7 293 330 13525 13562 F 38 100.00 330 reject_low 13 ALIGNMENT 0 YS2-15g18.q1k vc_7 62 292 13525 13524 F 231 0.00 330 reject_low 13 ALIGNMENT 840 YS2-15g19.q1k chr15 1116 52 811662 812723 C 1065 93.99 1261 accept 0 ALIGNMENT 972 YS2-15g19.p1k chr15 39 1134 807803 808903 F 1096 97.17 1349 accept 0 ALIGNMENT 876 YS2-15g20.q1k chr07 51 1118 300964 302027 F 1068 94.85 1239 accept 0 ALIGNMENT 975 YS2-15g20.p1k chr07 1211 43 305070 306243 C 1169 94.61 1362 accept 0 ALIGNMENT 20 YS2-15g21.q1k chr08 159 122 5135 5171 C 38 89.47 1255 reject_low 18 ALIGNMENT 0 YS2-15g21.q1k chr09 891 160 7419 7418 C 732 0.00 1255 reject_low 10 ALIGNMENT 0 YS2-15g21.q1k chr05 122 891 569899 569898 F 770 0.00 1255 reject_low 2 ALIGNMENT 65 YS2-15g21.q1k chr09 121 43 7480 7558 C 79 94.94 1255 reject_low 10 ALIGNMENT 70 YS2-15g21.q1k chr02 327 418 793780 793871 F 92 92.39 1255 reject_bad_break 0 ALIGNMENT 0 YS2-15g21.q1k chr13 891 160 5981 5980 C 732 0.00 1255 reject_low 16 ALIGNMENT 23 YS2-15g21.q1k chr02 122 159 812701 812737 F 38 89.47 1255 reject_low 14 ALIGNMENT 64 YS2-15g21.q1k chr03 43 121 316005 316084 F 79 94.94 1255 reject_low 1 ALIGNMENT 56 YS2-15g21.q1k chr14 43 120 783504 783583 F 78 92.31 1255 reject_low 7 ALIGNMENT 23 YS2-15g21.q1k chr04 159 122 540 576 C 38 89.47 1255 reject_low 15 ALIGNMENT 0 YS2-15g21.q1k chr02 62 160 793568 793567 F 99 0.00 1255 reject_bad_break 0 ALIGNMENT 0 YS2-15g21.q1k chr02 419 418 793872 793891 F 0 0.00 1255 reject_bad_break 0 ALIGNMENT 59 YS2-15g21.q1k chr08 120 43 5199 5278 C 78 93.59 1255 reject_low 18 ALIGNMENT 0 YS2-15g21.q1k chr11 122 891 665847 665846 F 770 0.00 1255 reject_low 4 ALIGNMENT 23 YS2-15g21.q1k chr01 159 122 432 468 C 38 89.47 1255 reject_low 17 ALIGNMENT 0 YS2-15g21.q1k chr16 160 891 942727 942726 F 732 0.00 1255 reject_low 13 ALIGNMENT 0 YS2-15g21.q1k chr14 121 891 783583 783582 F 771 0.00 1255 reject_low 7 ALIGNMENT 24 YS2-15g21.q1k chr09 159 122 7418 7453 C 38 92.11 1255 reject_low 10 ALIGNMENT 54 YS2-15g21.q1k chr01 121 43 495 575 C 79 91.14 1255 reject_low 17 ALIGNMENT 0 YS2-15g21.q1k chr02 160 891 812737 812736 F 732 0.00 1255 reject_low 14 ALIGNMENT 47 YS2-15g21.q1k chr12 96 43 11806 11859 C 54 96.30 1255 reject_low 9 ALIGNMENT 0 YS2-15g21.q1k chr08 121 121 5172 5198 C 1 0.00 1255 reject_low 18 ALIGNMENT 23 YS2-15g21.q1k chr13 159 122 5980 6016 C 38 89.47 1255 reject_low 16 ALIGNMENT 24 YS2-15g21.q1k chr14 159 122 7060 7095 C 38 92.11 1255 reject_low 12 ALIGNMENT 0 YS2-15g21.q1k chr02 121 121 812678 812700 F 1 0.00 1255 reject_low 14 ALIGNMENT 56 YS2-15g21.q1k chr02 120 43 6303 6382 C 78 92.31 1255 reject_low 6 ALIGNMENT 0 YS2-15g21.q1k chr02 471 891 793943 793942 F 421 0.00 1255 reject_bad_break 0 ALIGNMENT 0 YS2-15g21.q1k chr04 121 121 577 599 C 1 0.00 1255 reject_low 15 ALIGNMENT 60 YS2-15g21.q1k chr14 121 43 7122 7202 C 79 93.67 1255 reject_low 12 ALIGNMENT 23 YS2-15g21.q1k chr16 122 159 942691 942727 F 38 89.47 1255 reject_low 13 ALIGNMENT 64 YS2-15g21.q1k chr05 43 121 569820 569899 F 79 94.94 1255 reject_low 2 ALIGNMENT 0 YS2-15g21.q1k chr13 121 121 6017 6039 C 1 0.00 1255 reject_low 16 ALIGNMENT 0 YS2-15g21.q1k chr14 121 122 7096 7121 C 0 0.00 1255 reject_low 12 ALIGNMENT 0 YS2-15g21.q1k chr03 122 891 316084 316083 F 770 0.00 1255 reject_low 1 ALIGNMENT 0 YS2-15g21.q1k chr01 121 122 469 494 C 0 0.00 1255 reject_low 17 ALIGNMENT 60 YS2-15g21.q1k chr16 43 120 942589 942667 F 78 93.59 1255 reject_low 13 ALIGNMENT 39 YS2-15g21.q1k chr02 161 235 793568 793641 F 75 85.33 1255 reject_bad_break 0 ALIGNMENT 0 YS2-15g21.q1k chr11 891 122 506 505 C 770 0.00 1255 reject_low 5 ALIGNMENT 57 YS2-15g21.q1k chr11 121 44 505 581 C 78 92.31 1255 reject_low 5 ALIGNMENT 0 YS2-15g21.q1k chr16 121 121 942668 942690 F 1 0.00 1255 reject_low 13 ALIGNMENT 0 YS2-15g21.q1k chr02 891 121 6304 6303 C 771 0.00 1255 reject_low 6 ALIGNMENT 0 YS2-15g21.q1k chr08 891 160 5136 5135 C 732 0.00 1255 reject_low 18 ALIGNMENT 0 YS2-15g21.q1k chr10 891 160 7402 7401 C 732 0.00 1255 reject_low 11 ALIGNMENT 55 YS2-15g21.q1k chr06 121 43 5225 5304 C 79 91.14 1255 reject_low 8 ALIGNMENT 0 YS2-15g21.q1k chr09 121 122 7454 7479 C 0 0.00 1255 reject_low 10 ALIGNMENT 61 YS2-15g21.q1k chr11 43 121 665768 665847 F 79 93.67 1255 reject_low 4 ALIGNMENT 57 YS2-15g21.q1k chr04 120 43 600 678 C 78 92.31 1255 reject_low 15 ALIGNMENT 0 YS2-15g21.q1k chr15 891 122 544 543 C 770 0.00 1255 reject_low 3 ALIGNMENT 0 YS2-15g21.q1k chr10 121 122 7437 7462 C 0 0.00 1255 reject_low 11 ALIGNMENT 57 YS2-15g21.q1k chr13 120 43 6040 6118 C 78 92.31 1255 reject_low 16 ALIGNMENT 0 YS2-15g21.q1k chr12 891 97 11807 11806 C 795 0.00 1255 reject_low 9 ALIGNMENT 65 YS2-15g21.q1k chr10 121 43 7463 7541 C 79 94.94 1255 reject_low 11 ALIGNMENT 57 YS2-15g21.q1k chr02 43 120 812599 812677 F 78 92.31 1255 reject_low 14 ALIGNMENT 0 YS2-15g21.q1k chr14 891 160 7061 7060 C 732 0.00 1255 reject_low 12 ALIGNMENT 0 YS2-15g21.q1k chr01 891 160 433 432 C 732 0.00 1255 reject_low 17 ALIGNMENT 39 YS2-15g21.q1k chr02 419 470 793892 793943 F 52 92.31 1255 reject_bad_break 0 ALIGNMENT 0 YS2-15g21.q1k chr04 891 160 541 540 C 732 0.00 1255 reject_low 15 ALIGNMENT 24 YS2-15g21.q1k chr10 159 122 7401 7436 C 38 92.11 1255 reject_low 11 ALIGNMENT 64 YS2-15g21.q1k chr15 121 43 543 622 C 79 94.94 1255 reject_low 3 ALIGNMENT 0 YS2-15g21.q1k chr06 891 122 5226 5225 C 770 0.00 1255 reject_low 8 ALIGNMENT 0 YS2-15g21.q1k chr02 236 326 793642 793779 F 91 0.00 1255 reject_bad_break 0 ALIGNMENT 0 YS2-15g22.q1k vc_5 278 62 37 36 C 217 0.00 317 reject_low 7 ALIGNMENT 225 YS2-15g22.p1k chr08 278 32 419006 419251 C 247 98.79 297 accept_chi 1 ALIGNMENT 0 YS2-15g22.q1k vc_1 276 62 2513 2512 C 215 0.00 317 reject_low 2 ALIGNMENT 39 YS2-15g22.q1k vc_5 317 279 5025 5063 C 39 100.00 317 reject_low 5 ALIGNMENT 229 YS2-15g22.q1k chr08 32 277 419006 419251 F 246 99.19 317 accept_chi 0 ALIGNMENT 41 YS2-15g22.q1k vc_1 317 277 2472 2512 C 41 100.00 317 reject_low 2 ALIGNMENT 41 YS2-15g22.q1k vc_4 277 317 5831 5871 F 41 100.00 317 reject_low 4 ALIGNMENT 0 YS2-15g22.q1k vc_3 276 62 2513 2512 C 215 0.00 317 reject_low 3 ALIGNMENT 36 YS2-15g22.q1k vc_5 314 279 1 36 C 36 100.00 317 reject_low 7 ALIGNMENT 0 YS2-15g22.q1k vc_7 62 279 13525 13524 F 218 0.00 317 reject_low 6 ALIGNMENT 0 YS2-15g22.q1k vc_4 62 276 5831 5830 F 215 0.00 317 reject_low 4 ALIGNMENT 0 YS2-15g22.q1k chr08 278 317 419251 419250 F 40 0.00 317 accept_chi 0 ALIGNMENT 41 YS2-15g22.q1k vc_3 317 277 2472 2512 C 41 100.00 317 reject_low 3 ALIGNMENT 0 YS2-15g22.q1k vc_5 278 62 5064 5063 C 217 0.00 317 reject_low 5 ALIGNMENT 38 YS2-15g22.q1k vc_7 280 317 13525 13562 F 38 100.00 317 reject_low 6 ALIGNMENT 0 YS2-15g22.p1k chr08 297 279 419007 419006 C 19 0.00 297 accept_chi 1 ALIGNMENT 967 YS2-15g23.p1k chr08 34 1094 120616 121669 F 1061 98.11 1191 accept 0 ALIGNMENT 772 YS2-15h02.p1k chr09 1067 38 37323 38355 C 1030 91.65 1280 accept 1 ALIGNMENT 801 YS2-15h02.q1k chr07 955 30 3075 3989 C 926 97.41 1298 ambiguous_tel 0 ALIGNMENT 990 YS2-15h03.p1k chr07 32 1286 819607 820860 F 1255 93.55 1294 ambiguous_trans 1 ALIGNMENT 960 YS2-15h03.p1k chr07 32 1286 564058 565311 F 1255 92.75 1294 ambiguous_trans 9 ALIGNMENT 550 YS2-15h03.q1k chr11 615 5 47264 47871 C 611 97.38 1162 accept 0 ALIGNMENT 960 YS2-15h03.p1k chr07 1281 32 538227 539474 C 1250 92.80 1294 ambiguous_trans 12 ALIGNMENT 939 YS2-15h03.p1k chr13 1222 32 186686 187874 C 1191 93.62 1294 ambiguous_trans 19 ALIGNMENT 960 YS2-15h03.p1k chr04 32 1286 647708 648961 F 1255 92.75 1294 ambiguous_trans 6 ALIGNMENT 960 YS2-15h03.p1k chr01 32 1286 162453 163706 F 1255 92.75 1294 ambiguous_trans 5 ALIGNMENT 960 YS2-15h03.p1k chr04 32 1286 988930 990183 F 1255 92.75 1294 ambiguous_trans 7 ALIGNMENT 939 YS2-15h03.p1k chr05 32 1222 445607 446795 F 1191 93.53 1294 ambiguous_trans 17 ALIGNMENT 954 YS2-15h03.p1k chr16 1222 32 58973 60161 C 1191 94.04 1294 ambiguous_trans 15 ALIGNMENT 965 YS2-15h03.p1k chr12 1286 32 653279 654534 C 1255 92.83 1294 ambiguous_trans 4 ALIGNMENT 939 YS2-15h03.p1k chr13 32 1222 374911 376099 F 1191 93.53 1294 ambiguous_trans 21 ALIGNMENT 960 YS2-15h03.p1k chr04 1286 32 1098219 1099472 C 1255 92.75 1294 ambiguous_trans 8 ALIGNMENT 954 YS2-15h03.p1k chr04 1222 32 1209212 1210400 C 1191 93.95 1294 ambiguous_trans 13 ALIGNMENT 939 YS2-15h03.p1k chr15 1222 32 120224 121412 C 1191 93.62 1294 ambiguous_trans 22 ALIGNMENT 973 YS2-15h03.p1k chr16 1286 32 846865 848121 C 1255 92.99 1294 ambiguous_trans 2 ALIGNMENT 957 YS2-15h03.p1k chr15 1286 32 597272 598525 C 1255 92.75 1294 ambiguous_trans 11 ALIGNMENT 939 YS2-15h03.p1k chr10 1222 32 480483 481671 C 1191 93.62 1294 ambiguous_trans 18 ALIGNMENT 966 YS2-15h03.p1k chr13 32 1286 359213 360466 F 1255 92.91 1294 ambiguous_trans 3 ALIGNMENT 939 YS2-15h03.p1k chr13 1222 32 198853 200041 C 1191 93.62 1294 ambiguous_trans 20 ALIGNMENT 954 YS2-15h03.p1k chr12 32 1222 478189 479377 F 1191 93.95 1294 ambiguous_trans 14 ALIGNMENT 960 YS2-15h03.p1k chr16 32 1286 806852 808105 F 1255 92.75 1294 ambiguous_trans 10 ALIGNMENT 945 YS2-15h03.p1k chr10 1222 32 474899 476087 C 1191 93.79 1294 ambiguous_trans 16 ALIGNMENT 918 YS2-15h03.p1k chr16 32 1281 852840 854087 F 1250 91.68 1294 ambiguous_trans 23 ALIGNMENT 0 YS2-15h04.q1k vc_7 53 54 5172 6360 C 0 0.00 894 reject_vc 7 ALIGNMENT 0 YS2-15h04.q1k vc_7 304 300 4700 4925 C 5 0.00 894 reject_vc 7 ALIGNMENT 237 YS2-15h04.q1k vc_7 299 53 4926 5172 C 247 98.79 894|0,1 reject_vc 7 ALIGNMENT 0 YS2-15h04.q1k vc_4 62 237 1548 1547 F 176 0.00 894 reject_vc 10 ALIGNMENT 55 YS2-15h04.q1k vc_4 238 299 1548 1609 F 62 96.77 894 reject_vc 10 ALIGNMENT 353 YS2-15h04.q1k vc_7 492 1 2086 2569 C 492 91.87 894 reject_vc 1 ALIGNMENT 51 YS2-15h04.q1k vc_7 54 3 6360 6411 C 52 100.00 894|1,0 reject_vc 7 ALIGNMENT 340 YS2-15h04.q1k vc_4 413 1 5244 5654 C 413 94.92 894 reject_vc 3 ALIGNMENT 0 YS2-15h04.q1k vc_4 300 310 1610 1881 F 11 0.00 894 reject_vc 10 ALIGNMENT 0 YS2-15h04.p1k chr14 255 272 373035 373034 F 18 0.00 272 accept 0 ALIGNMENT 0 YS2-15h04.q1k vc_4 237 62 113 112 C 176 0.00 894 reject_vc 8 ALIGNMENT 57 YS2-15h04.q1k vc_4 311 487 1882 2051 F 177 80.79 894 reject_vc 10 ALIGNMENT 55 YS2-15h04.q1k vc_4 299 238 6278 6339 C 62 96.77 894 reject_vc 9 ALIGNMENT 218 YS2-15h04.p1k chr14 33 254 372814 373035 F 222 100.00 272 accept 0 ALIGNMENT 291 YS2-15h04.q1k vc_2 1 299 2322 2620 F 299 99.33 894 reject_vc 5 ALIGNMENT 291 YS2-15h04.q1k vc_1 1 299 2689 2987 F 299 99.33 894 reject_vc 4 ALIGNMENT 55 YS2-15h04.q1k vc_4 299 238 51 112 C 62 96.77 894 reject_vc 8 ALIGNMENT 291 YS2-15h04.q1k vc_3 1 299 2689 2987 F 299 99.33 894 reject_vc 6 ALIGNMENT 0 YS2-15h04.q1k vc_4 237 62 6340 6339 C 176 0.00 894 reject_vc 9 ALIGNMENT 55 YS2-15h04.q1k vc_7 413 305 4595 4699 C 109 86.24 894 reject_vc 7 ALIGNMENT 353 YS2-15h04.q1k vc_5 1 487 2556 3035 F 487 91.99 894 reject_vc 2 ALIGNMENT 448 YS2-15h06.p1k chr02 478 28 268399 268849 C 451 100.00 496 accept 0 ALIGNMENT 0 YS2-15h06.p1k chr02 496 479 268400 268399 C 18 0.00 496 accept 0 ALIGNMENT 0 YS2-15h08.p1k chr12 619 820 214957 214956 F 202 0.00 1301 reject_low 4 ALIGNMENT 73 YS2-15h08.p1k chr12 545 618 214884 214957 F 74 100.00 1301 reject_low 4 ALIGNMENT 579 YS2-15h08.p1k chr15 39 634 853677 854273 F 596 99.83 1301|0,3 accept 0 ALIGNMENT 0 YS2-15h08.p1k chr07 820 618 794423 794422 C 203 0.00 1301 reject_low 1 ALIGNMENT 0 YS2-15h08.p1k chr15 632 631 854271 854615 F 0 0.00 1301 accept 0 ALIGNMENT 236 YS2-15h08.p1k chr15 629 1002 854613 855003 F 374 91.18 1301|3,0 accept 0 ALIGNMENT 76 YS2-15h08.p1k chr07 617 537 794422 794503 C 81 98.77 1301 reject_low 1 ALIGNMENT 75 YS2-15h08.p1k chr01 617 539 166268 166346 C 79 98.73 1301 reject_low 2 ALIGNMENT 0 YS2-15h08.p1k chr01 820 618 166269 166268 C 203 0.00 1301 reject_low 2 ALIGNMENT 74 YS2-15h08.p1k chr05 543 617 312017 312091 F 75 100.00 1301 reject_low 3 ALIGNMENT 0 YS2-15h08.p1k chr05 62 542 312017 312016 F 481 0.00 1301 reject_low 3 ALIGNMENT 0 YS2-15h08.p1k chr05 618 820 312091 312090 F 203 0.00 1301 reject_low 3 ALIGNMENT 0 YS2-15h08.p1k chr01 538 62 166347 166346 C 477 0.00 1301 reject_low 2 ALIGNMENT 0 YS2-15h08.p1k chr12 62 544 214884 214883 F 483 0.00 1301 reject_low 4 ALIGNMENT 0 YS2-15h08.p1k chr07 536 62 794504 794503 C 475 0.00 1301 reject_low 1 ALIGNMENT 931 YS2-15h09.q1k chr04 1158 39 1159525 1160662 C 1120 95.71 1310 accept 0 ALIGNMENT 153 YS2-15h09.q1k chr08 1018 374 294755 295400 C 645 76.90 1310 reject_low 5 ALIGNMENT 0 YS2-15h09.q1k chr08 373 62 295401 295400 C 312 0.00 1310 reject_low 5 ALIGNMENT 436 YS2-15h09.q1k chr08 992 39 287190 288146 C 954 83.02 1310 reject_low 3 ALIGNMENT 72 YS2-15h09.q1k chr06 418 847 113322 113751 F 430 73.95 1310 reject_low 8 ALIGNMENT 0 YS2-15h09.p1k chr04 62 958 1154122 1154121 F 897 0.00 1264 reject_low 1,2 ALIGNMENT 0 YS2-15h09.q1k chr13 62 355 289020 289019 F 294 0.00 1310 reject_low 7 ALIGNMENT 1009 YS2-15h09.p1k chr04 35 1212 1158591 1159769 F 1178 96.52 1264 accept 0 ALIGNMENT 0 YS2-15h09.q1k chr06 62 417 113322 113321 F 356 0.00 1310 reject_low 8 ALIGNMENT 148 YS2-15h09.q1k chr10 59 885 27565 28391 F 827 74.37 1310 reject_low 6 ALIGNMENT 915 YS2-15h09.q1k chr04 1139 39 1154155 1155270 C 1101 95.64 1310 reject_low 1 ALIGNMENT 128 YS2-15h09.p1k chr04 959 1212 1154122 1154377 F 254 85.43 1264 reject_low 1,2 ALIGNMENT 392 YS2-15h09.q1k chr04 1083 39 1162961 1164011 C 1045 80.38 1310 reject_low 2 ALIGNMENT 131 YS2-15h09.q1k chr13 356 893 289020 289557 F 538 76.21 1310 reject_low 7 ALIGNMENT 281 YS2-15h09.q1k chr08 893 59 291122 291956 C 835 79.16 1310 reject_low 4 ALIGNMENT 964 YS2-15h10.p1k chr05 33 1136 273373 274490 F 1104 97.10 1245 accept_chi 0 ALIGNMENT 771 YS2-15h10.q1k chr09 998 36 272846 273802 C 963 94.81 1448 accept_chi 1 ALIGNMENT 257 YS2-15h12.q1k chr15 120 512 14928 15321 F 393 90.33 826 ambiguous_tel 1 ALIGNMENT 799 YS2-15h12.p1k chr11 148 1111 310811 311783 F 964 94.19 1382 accept 0 ALIGNMENT 0 YS2-15h12.p1k chr11 62 147 310811 310810 F 86 0.00 1382 accept 0 ALIGNMENT 176 YS2-15h14.p1k vc_2 1166 895 1825 2105 C 272 89.34 1251 reject_low 2 ALIGNMENT 0 YS2-15h14.p1k vc_2 894 62 2106 2105 C 833 0.00 1251 reject_low 2 ALIGNMENT 176 YS2-15h14.p1k vc_3 1166 895 1825 2105 C 272 89.34 1251 reject_low 3 ALIGNMENT 0 YS2-15h14.p1k vc_3 894 62 2106 2105 C 833 0.00 1251 reject_low 3 ALIGNMENT 176 YS2-15h14.p1k vc_1 1166 895 1825 2105 C 272 89.34 1251 reject_low 1 ALIGNMENT 176 YS2-15h14.p1k vc_4 895 1166 5871 6151 F 272 89.34 1251 reject_low 4 ALIGNMENT 0 YS2-15h14.p1k vc_3 894 62 2473 2472 C 833 0.00 1251 reject_low 9 ALIGNMENT 0 YS2-15h14.p1k vc_1 894 62 2106 2105 C 833 0.00 1251 reject_low 1 ALIGNMENT 176 YS2-15h14.p1k vc_7 895 1166 13562 13842 F 272 89.34 1251 reject_low 7 ALIGNMENT 26 YS2-15h14.p1k vc_1 925 895 2441 2472 C 31 96.77 1251 reject_low 8 ALIGNMENT 0 YS2-15h14.p1k vc_7 62 894 13562 13561 F 833 0.00 1251 reject_low 7 ALIGNMENT 0 YS2-15h14.p1k vc_4 62 894 5871 5870 F 833 0.00 1251 reject_low 4 ALIGNMENT 0 YS2-15h14.p1k vc_7 62 894 100 99 F 833 0.00 1251 reject_low 6 ALIGNMENT 176 YS2-15h14.p1k vc_7 895 1166 100 380 F 272 89.34 1251 reject_low 6 ALIGNMENT 0 YS2-15h14.p1k vc_5 894 62 5026 5025 C 833 0.00 1251 reject_low 5 ALIGNMENT 0 YS2-15h14.p1k vc_1 894 62 2473 2472 C 833 0.00 1251 reject_low 8 ALIGNMENT 176 YS2-15h14.p1k vc_5 1166 895 4745 5025 C 272 89.34 1251 reject_low 5 ALIGNMENT 782 YS2-15h14.p1k chr04 34 876 88511 89353 F 843 99.29 1251 accept 0 ALIGNMENT 26 YS2-15h14.p1k vc_3 925 895 2441 2472 C 31 96.77 1251 reject_low 9 ALIGNMENT 567 YS2-15h15.p1k chr15 38 661 143838 144460 F 624 97.92 679 accept 0 ALIGNMENT 289 YS2-15h15.q1k chr15 395 51 144116 144459 C 345 95.36 1672 accept 0 ALIGNMENT 0 YS2-15h15.p1k chr15 662 679 144460 144459 F 18 0.00 679 accept 0 ALIGNMENT 0 YS2-15h17.p1k chr09 428 446 413432 413431 F 19 0.00 446 ambiguous_tel 0 ALIGNMENT 0 YS2-15h17.q1k vc_5 433 62 37 36 C 372 0.00 472 reject_low 8 ALIGNMENT 41 YS2-15h17.q1k vc_2 472 432 2105 2145 C 41 100.00 472 reject_low 3 ALIGNMENT 41 YS2-15h17.q1k vc_3 472 432 2472 2512 C 41 100.00 472 reject_low 4 ALIGNMENT 0 YS2-15h17.q1k chr09 472 432 413042 413041 C 41 0.00 472 ambiguous_tel 1 ALIGNMENT 0 YS2-15h17.q1k vc_3 431 62 2513 2512 C 370 0.00 472 reject_low 4 ALIGNMENT 0 YS2-15h17.q1k vc_7 62 434 13525 13524 F 373 0.00 472 reject_low 7 ALIGNMENT 0 YS2-15h17.q1k vc_5 433 62 5064 5063 C 372 0.00 472 reject_low 6 ALIGNMENT 41 YS2-15h17.q1k vc_1 472 432 2472 2512 C 41 100.00 472 reject_low 2 ALIGNMENT 41 YS2-15h17.q1k vc_4 432 472 5831 5871 F 41 100.00 472 reject_low 5 ALIGNMENT 38 YS2-15h17.q1k vc_7 435 472 13525 13562 F 38 100.00 472 reject_low 7 ALIGNMENT 39 YS2-15h17.q1k vc_5 472 434 5025 5063 C 39 100.00 472 reject_low 6 ALIGNMENT 382 YS2-15h17.p1k chr09 36 427 413041 413432 F 392 99.74 446 ambiguous_tel 0 ALIGNMENT 36 YS2-15h17.q1k vc_5 469 434 1 36 C 36 100.00 472 reject_low 8 ALIGNMENT 0 YS2-15h17.q1k vc_1 431 62 2513 2512 C 370 0.00 472 reject_low 2 ALIGNMENT 0 YS2-15h17.q1k vc_4 62 431 5831 5830 F 370 0.00 472 reject_low 5 ALIGNMENT 382 YS2-15h17.q1k chr09 431 40 413041 413432 C 392 99.74 472 ambiguous_tel 1 ALIGNMENT 0 YS2-15h17.q1k vc_2 431 62 2146 2145 C 370 0.00 472 reject_low 3 ALIGNMENT 23 YS2-15h18.p1k chr04 850 882 392136 392169 F 33 96.97 1317 reject_low 2 ALIGNMENT 886 YS2-15h18.q1k chr16 1092 40 488031 489096 C 1053 96.20 1306 accept 0 ALIGNMENT 0 YS2-15h18.p1k chr07 886 606 479926 479925 C 281 0.00 1317 reject_low 1 ALIGNMENT 306 YS2-15h18.p1k chr07 605 41 479925 480489 C 565 85.49 1317 reject_low 1 ALIGNMENT 0 YS2-15h18.p1k chr04 62 849 392136 392135 F 788 0.00 1317 reject_low 2 ALIGNMENT 864 YS2-15h18.p1k chr16 41 1118 485110 486178 F 1078 94.81 1317 accept 0 ALIGNMENT 970 YS2-15h19.p1k chr08 36 1177 2272 3427 F 1142 95.18 1356 ambiguous_tel 19 ALIGNMENT 1001 YS2-15h19.p1k chr16 1177 36 944482 945632 C 1142 96.06 1356 ambiguous_tel 4 ALIGNMENT 1001 YS2-15h19.p1k chr12 36 1177 2545 3695 F 1142 96.06 1356 ambiguous_tel 1 ALIGNMENT 998 YS2-15h19.p1k chr13 36 1177 2421 3571 F 1142 95.97 1356 ambiguous_tel 9 ALIGNMENT 998 YS2-15h19.p1k chr14 36 1177 2328 3478 F 1142 95.97 1356 ambiguous_tel 10 ALIGNMENT 991 YS2-15h19.p1k chr08 1177 36 558935 560086 C 1142 95.80 1356 ambiguous_tel 15 ALIGNMENT 998 YS2-15h19.p1k chr04 1177 36 1528584 1529734 C 1142 95.97 1356 ambiguous_tel 5 ALIGNMENT 991 YS2-15h19.p1k chr02 36 1177 2745 3896 F 1142 95.80 1356 ambiguous_tel 14 ALIGNMENT 998 YS2-15h19.p1k chr16 36 1177 2237 3387 F 1142 95.97 1356 ambiguous_tel 12 ALIGNMENT 998 YS2-15h19.p1k chr07 1177 36 1087490 1088640 C 1142 95.97 1356 ambiguous_tel 7 ALIGNMENT 998 YS2-15h19.p1k chr15 1177 36 1087749 1088899 C 1142 95.97 1356 ambiguous_tel 11 ALIGNMENT 983 YS2-15h19.p1k chr10 36 1177 2699 3849 F 1142 95.53 1356 ambiguous_tel 18 ALIGNMENT 998 YS2-15h19.p1k chr12 1177 36 1074785 1075935 C 1142 95.97 1356 ambiguous_tel 8 ALIGNMENT 1001 YS2-15h19.p1k chr12 36 1177 8080 9230 F 1142 96.06 1356 ambiguous_tel 2 ALIGNMENT 998 YS2-15h19.p1k chr05 1177 36 573413 574563 C 1142 95.97 1356 ambiguous_tel 6 ALIGNMENT 986 YS2-15h19.p1k chr09 36 1177 2716 3866 F 1142 95.62 1356 ambiguous_tel 17 ALIGNMENT 565 YS2-15h19.q1k chr13 48 992 46272 47194 F 945 88.68 1397 accept 0 ALIGNMENT 1001 YS2-15h19.p1k chr12 1177 36 1068122 1069272 C 1142 96.06 1356 ambiguous_tel 3 ALIGNMENT 989 YS2-15h19.p1k chr05 36 1177 2392 3542 F 1142 95.71 1356 ambiguous_tel 16 ALIGNMENT 992 YS2-15h19.p1k chr06 36 1177 1582 2732 F 1142 95.80 1356 ambiguous_tel 13 ALIGNMENT 0 YS2-15h20.p1k chr15 330 348 542332 542331 F 19 0.00 348 accept 0 ALIGNMENT 302 YS2-15h20.q1k vc_1 1 303 2689 2991 F 303 100.00 712 reject_vc 4 ALIGNMENT 0 YS2-15h20.q1k vc_4 386 305 6274 6273 C 82 0.00 712 reject_low 10 ALIGNMENT 302 YS2-15h20.q1k vc_3 1 303 2689 2991 F 303 100.00 712 reject_vc 6 ALIGNMENT 302 YS2-15h20.q1k vc_2 1 303 2322 2624 F 303 100.00 712 reject_vc 5 ALIGNMENT 247 YS2-15h20.q1k vc_7 303 53 4922 5172 C 251 99.60 712|0,1 reject_vc 8 ALIGNMENT 0 YS2-15h20.q1k vc_4 62 237 1548 1547 F 176 0.00 712 reject_vc 7 ALIGNMENT 512 YS2-15h20.q1k vc_5 1 679 2556 3248 F 679 92.05 712 reject_vc 1 ALIGNMENT 0 YS2-15h20.q1k vc_7 304 304 4700 4921 C 1 0.00 712 reject_vc 8 ALIGNMENT 65 YS2-15h20.q1k vc_4 304 238 46 112 C 67 100.00 712 reject_low 9 ALIGNMENT 0 YS2-15h20.q1k vc_3 304 386 2991 2990 F 83 0.00 712 reject_vc 6 ALIGNMENT 65 YS2-15h20.q1k vc_4 304 238 6273 6339 C 67 100.00 712 reject_low 10 ALIGNMENT 0 YS2-15h20.q1k vc_7 53 54 5172 6360 C 0 0.00 712 reject_vc 8 ALIGNMENT 201 YS2-15h20.q1k vc_4 308 679 1879 2264 F 372 85.22 712 reject_vc 7 ALIGNMENT 65 YS2-15h20.q1k vc_4 238 304 1548 1614 F 67 100.00 712 reject_vc 7 ALIGNMENT 91 YS2-15h20.q1k vc_7 409 305 4596 4699 C 105 95.24 712 reject_vc 8 ALIGNMENT 0 YS2-15h20.q1k vc_4 237 62 113 112 C 176 0.00 712 reject_low 9 ALIGNMENT 388 YS2-15h20.q1k vc_4 409 1 5245 5654 C 409 98.29 712 reject_vc 3 ALIGNMENT 0 YS2-15h20.q1k vc_2 304 386 2624 2623 F 83 0.00 712 reject_vc 5 ALIGNMENT 289 YS2-15h20.p1k chr15 34 329 542037 542332 F 296 100.00 348 accept 0 ALIGNMENT 0 YS2-15h20.q1k vc_4 237 62 6340 6339 C 176 0.00 712 reject_low 10 ALIGNMENT 51 YS2-15h20.q1k vc_7 54 3 6360 6411 C 52 100.00 712|1,0 reject_vc 8 ALIGNMENT 0 YS2-15h20.q1k vc_4 386 305 47 46 C 82 0.00 712 reject_low 9 ALIGNMENT 0 YS2-15h20.q1k vc_4 305 307 1615 1878 F 3 0.00 712 reject_vc 7 ALIGNMENT 0 YS2-15h20.q1k vc_1 304 386 2991 2990 F 83 0.00 712 reject_vc 4 ALIGNMENT 504 YS2-15h20.q1k vc_7 630 1 1930 2569 C 630 93.49 712 reject_vc 2 ALIGNMENT 976 YS2-15h22.p1k chr13 32 1136 692282 693389 F 1105 96.92 1152 accept 0 ALIGNMENT 949 YS2-15h22.q1k chr13 1090 43 694838 695883 C 1048 97.23 1263 accept 0 ALIGNMENT 1005 YS2-15h23.p1k chr01 40 1156 135735 136850 F 1117 97.49 1176 accept 0 ALIGNMENT 1010 YS2-15h24.p1k chr06 37 1149 105017 106125 F 1113 97.39 1176 accept 0 ALIGNMENT 921 YS2-15h24.q1k chr06 1103 50 108247 109296 C 1054 96.87 1119 accept 0 ALIGNMENT 1018 YS2-15i01.p1k chr10 29 1199 45053 46213 F 1171 97.44 1207 accept 0 ALIGNMENT 981 YS2-15i01.q1k chr10 1131 32 45836 46943 C 1100 97.91 1243 accept 0 ALIGNMENT 0 YS2-15i02.p1k chr12 79 62 468931 468930 C 18 0.00 1197 reject_low 1 ALIGNMENT 119 YS2-15i02.p1k chr12 198 80 485696 485814 C 119 100.00 1197 reject_low 6 ALIGNMENT 1028 YS2-15i02.q1k chr12 28 1281 463511 464767 F 1254 94.82 1282 reject_low 1 ALIGNMENT 0 YS2-15i02.p1k chr12 851 199 485697 485696 C 653 0.00 1197 reject_low 6 ALIGNMENT 128 YS2-15i02.p1k chr12 198 65 489348 489481 C 134 98.51 1197 reject_low 2 ALIGNMENT 0 YS2-15i02.p1k chr12 79 62 482163 482162 C 18 0.00 1197 reject_low 5 ALIGNMENT 0 YS2-15i02.p1k chr06 566 851 31729 31728 F 286 0.00 1197 reject_low 3 ALIGNMENT 119 YS2-15i02.p1k chr12 198 80 472464 472582 C 119 100.00 1197 reject_low 4 ALIGNMENT 0 YS2-15i02.p1k chr12 851 199 489349 489348 C 653 0.00 1197 reject_low 2 ALIGNMENT 940 YS2-15i02.p1k chr12 1128 53 458742 459820 C 1076 97.30 1197 accept 0 ALIGNMENT 917 YS2-15i02.p1k chr12 1128 80 467879 468930 C 1049 97.24 1197 reject_low 1 ALIGNMENT 119 YS2-15i02.p1k chr12 198 80 482044 482162 C 119 100.00 1197 reject_low 5 ALIGNMENT 0 YS2-15i02.p1k chr12 851 199 472465 472464 C 653 0.00 1197 reject_low 4 ALIGNMENT 0 YS2-15i02.p1k chr06 62 457 31622 31621 F 396 0.00 1197 reject_low 3 ALIGNMENT 0 YS2-15i02.p1k chr12 79 62 485815 485814 C 18 0.00 1197 reject_low 6 ALIGNMENT 0 YS2-15i02.p1k chr12 79 62 472583 472582 C 18 0.00 1197 reject_low 4 ALIGNMENT 94 YS2-15i02.p1k chr06 458 565 31622 31729 F 108 98.15 1197 reject_low 3 ALIGNMENT 0 YS2-15i02.p1k chr12 851 199 482045 482044 C 653 0.00 1197 reject_low 5 ALIGNMENT 1028 YS2-15i02.q1k chr12 28 1281 454374 455630 F 1254 94.82 1282 accept 0 ALIGNMENT 936 YS2-15i03.q1k chr03 37 1089 256074 257130 F 1053 97.72 1343 accept 0 ALIGNMENT 909 YS2-15i03.p1k chr03 1074 25 256077 257130 C 1050 96.67 1314 accept 0 ALIGNMENT 891 YS2-15i04.p1k chr04 1050 29 1110220 1111258 C 1022 96.97 1270 accept 0 ALIGNMENT 935 YS2-15i04.q1k chr04 38 1112 1106130 1107215 F 1075 96.93 1295 accept 0 ALIGNMENT 880 YS2-15i05.p1k chr15 30 1029 482779 483793 F 1000 96.90 1240 accept 0 ALIGNMENT 966 YS2-15i05.q1k chr15 1144 39 486242 487350 C 1106 97.11 1144 accept 0 ALIGNMENT 890 YS2-15i06.q1k chr11 1041 36 306027 307022 C 1006 97.81 1172 accept 0 ALIGNMENT 965 YS2-15i06.p1k chr11 33 1063 305472 306509 F 1031 98.64 1234 accept 0 ALIGNMENT 0 YS2-15i07.q1k chr12 835 62 485815 485814 C 774 0.00 1360 reject_low 6 ALIGNMENT 0 YS2-15i07.q1k chr12 835 62 482163 482162 C 774 0.00 1360 reject_low 5 ALIGNMENT 154 YS2-15i07.q1k chr12 1206 836 468572 468930 C 371 83.83 1360 reject_low 1 ALIGNMENT 108 YS2-15i07.q1k chr12 953 836 485696 485814 C 118 97.46 1360 reject_low 6 ALIGNMENT 0 YS2-15i07.q1k chr12 835 62 472583 472582 C 774 0.00 1360 reject_low 4 ALIGNMENT 1020 YS2-15i07.p1k chr12 30 1244 464737 465933 F 1215 95.88 1268 reject_low 1 ALIGNMENT 0 YS2-15i07.q1k chr12 787 110 451420 451419 C 678 0.00 1360 reject_low 2 ALIGNMENT 108 YS2-15i07.q1k chr12 953 836 472464 472582 C 118 97.46 1360 reject_low 4 ALIGNMENT 0 YS2-15i07.q1k chr12 835 62 468931 468930 C 774 0.00 1360 reject_low 1 ALIGNMENT 79 YS2-15i07.q1k chr12 109 31 451419 451497 C 79 100.00 1360 reject_low 2 ALIGNMENT 1020 YS2-15i07.p1k chr12 30 1244 455600 456796 F 1215 95.88 1268 accept 0 ALIGNMENT 772 YS2-15i07.q1k chr12 1206 31 459435 460634 C 1176 90.82 1360 accept 0 ALIGNMENT 108 YS2-15i07.q1k chr12 953 836 482044 482162 C 118 97.46 1360 reject_low 5 ALIGNMENT 0 YS2-15i07.q1k chr12 820 62 489482 489481 C 759 0.00 1360 reject_low 3 ALIGNMENT 117 YS2-15i07.q1k chr12 953 821 489348 489481 C 133 96.24 1360 reject_low 3 ALIGNMENT 997 YS2-15i09.p1k chr11 33 1170 87702 88848 F 1138 97.10 1270 accept 0 ALIGNMENT 970 YS2-15i09.q1k chr11 1206 38 88881 90055 C 1169 95.55 1309 accept 0 ALIGNMENT 0 YS2-15i10.q1k chr05 418 380 444788 444787 C 39 0.00 418 reject_low 5 ALIGNMENT 326 YS2-15i10.q1k chr02 32 379 225218 225566 F 348 98.85 418 reject_low 15 ALIGNMENT 0 YS2-15i10.q1k chr13 380 418 200861 200860 F 39 0.00 418 reject_low 9 ALIGNMENT 0 YS2-15i10.q1k chr07 380 418 540294 540293 F 39 0.00 418 reject_low 18 ALIGNMENT 332 YS2-15i10.q1k chr13 379 32 358393 358741 C 348 99.43 418 reject_low 10 ALIGNMENT 294 YS2-15i10.q1k chr16 379 40 852020 852359 C 340 96.47 418 reject_low 24 ALIGNMENT 323 YS2-15i10.p1k chr02 373 26 263755 264103 C 348 98.85 384 reject_low 25 ALIGNMENT 294 YS2-15i10.q1k chr16 379 40 806032 806371 C 340 96.47 418 reject_low 23 ALIGNMENT 0 YS2-15i10.q1k chr12 418 380 477370 477369 C 39 0.00 418 reject_low 8 ALIGNMENT 332 YS2-15i10.q1k chr16 32 379 60633 60981 F 348 99.43 418 reject_low 13 ALIGNMENT 0 YS2-15i10.p1k chr16 366 384 852359 852358 F 19 0.00 384 reject_low 47 ALIGNMENT 332 YS2-15i10.q1k chr15 32 379 121884 122232 F 348 99.43 418 reject_low 11 ALIGNMENT 323 YS2-15i10.p1k chr16 373 26 848593 848941 C 348 98.85 384 reject_low 37 ALIGNMENT 317 YS2-15i10.p1k chr04 373 26 1210872 1211220 C 348 98.28 384 reject_low 39 ALIGNMENT 314 YS2-15i10.p1k chr08 26 373 544999 545347 F 348 97.99 384 reject_low 42 ALIGNMENT 332 YS2-15i10.q1k chr15 32 379 598997 599345 F 348 99.43 418 reject_low 12 ALIGNMENT 0 YS2-15i10.q1k chr10 380 418 476907 476906 F 39 0.00 418 manual 1 ALIGNMENT 323 YS2-15i10.p1k chr07 26 373 818787 819135 F 348 98.85 384 reject_low 30 ALIGNMENT 332 YS2-15i10.q1k chr02 32 379 263755 264103 F 348 99.43 418 reject_low 2 ALIGNMENT 323 YS2-15i10.p1k chr13 26 373 358393 358741 F 348 98.85 384 reject_low 33 ALIGNMENT 0 YS2-15i10.q1k chr13 418 380 374092 374091 C 39 0.00 418 reject_low 22 ALIGNMENT 0 YS2-15i10.q1k chr02 380 418 225566 225565 F 39 0.00 418 reject_low 15 ALIGNMENT 332 YS2-15i10.q1k chr07 379 32 818787 819135 C 348 99.43 418 reject_low 7 ALIGNMENT 0 YS2-15i10.q1k chr15 380 418 599345 599344 F 39 0.00 418 reject_low 12 ALIGNMENT 0 YS2-15i10.q1k chr07 418 380 563239 563238 C 39 0.00 418 reject_low 6 ALIGNMENT 332 YS2-15i10.q1k chr07 379 32 563238 563586 C 348 99.43 418 reject_low 6 ALIGNMENT 323 YS2-15i10.p1k chr15 373 26 598997 599345 C 348 98.85 384 reject_low 35 ALIGNMENT 0 YS2-15i10.q1k chr04 380 418 1211220 1211219 F 39 0.00 418 reject_low 17 ALIGNMENT 332 YS2-15i10.q1k chr13 32 379 188346 188694 F 348 99.43 418 manual 0 ALIGNMENT 320 YS2-15i10.q1k chr05 379 32 493886 494234 C 348 98.28 418 reject_low 21 ALIGNMENT 311 YS2-15i10.p1k chr05 26 373 493886 494234 F 348 97.70 384 reject_low 43 ALIGNMENT 323 YS2-15i10.p1k chr05 26 373 444787 445135 F 348 98.85 384 reject_low 28 ALIGNMENT 332 YS2-15i10.q1k chr04 32 379 1099944 1100292 F 348 99.43 418 reject_low 4 ALIGNMENT 287 YS2-15i10.p1k chr10 373 26 476559 476907 C 348 95.40 384 reject_low 45 ALIGNMENT 285 YS2-15i10.p1k chr16 26 365 806032 806371 F 340 95.88 384 reject_low 46 ALIGNMENT 311 YS2-15i10.p1k chr13 26 373 374091 374439 F 348 97.70 384 reject_low 44 ALIGNMENT 320 YS2-15i10.q1k chr13 379 32 374091 374439 C 348 98.28 418 reject_low 22 ALIGNMENT 0 YS2-15i10.q1k chr13 418 380 358394 358393 C 39 0.00 418 reject_low 10 ALIGNMENT 0 YS2-15i10.q1k chr05 418 380 493887 493886 C 39 0.00 418 reject_low 21 ALIGNMENT 317 YS2-15i10.p1k chr10 373 26 482143 482491 C 348 98.28 384 manual 1 ALIGNMENT 323 YS2-15i10.p1k chr13 373 26 188346 188694 C 348 98.85 384 reject_low 32 ALIGNMENT 332 YS2-15i10.q1k chr05 379 32 444787 445135 C 348 99.43 418 reject_low 5 ALIGNMENT 0 YS2-15i10.q1k chr10 380 418 482491 482490 F 39 0.00 418 reject_low 19 ALIGNMENT 323 YS2-15i10.p1k chr16 373 26 60633 60981 C 348 98.85 384 reject_low 36 ALIGNMENT 0 YS2-15i10.q1k chr02 380 418 264103 264102 F 39 0.00 418 reject_low 2 ALIGNMENT 326 YS2-15i10.q1k chr04 32 379 1210872 1211220 F 348 98.85 418 reject_low 17 ALIGNMENT 317 YS2-15i10.p1k chr12 373 26 655006 655354 C 348 98.28 384 reject_low 41 ALIGNMENT 332 YS2-15i10.q1k chr04 379 32 646888 647236 C 348 99.43 418 reject_low 3 ALIGNMENT 0 YS2-15i10.q1k chr16 380 418 848941 848940 F 39 0.00 418 reject_low 14 ALIGNMENT 332 YS2-15i10.q1k chr13 32 379 200513 200861 F 348 99.43 418 reject_low 9 ALIGNMENT 0 YS2-15i10.q1k chr04 380 418 1100292 1100291 F 39 0.00 418 reject_low 4 ALIGNMENT 326 YS2-15i10.q1k chr10 32 379 482143 482491 F 348 98.85 418 reject_low 19 ALIGNMENT 326 YS2-15i10.q1k chr07 32 379 539946 540294 F 348 98.85 418 reject_low 18 ALIGNMENT 323 YS2-15i10.p1k chr04 26 373 646888 647236 F 348 98.85 384 reject_low 26 ALIGNMENT 323 YS2-15i10.p1k chr13 373 26 200513 200861 C 348 98.85 384 manual 0 ALIGNMENT 0 YS2-15i10.q1k chr12 380 418 655354 655353 F 39 0.00 418 reject_low 20 ALIGNMENT 0 YS2-15i10.q1k chr16 418 380 852021 852020 C 39 0.00 418 reject_low 24 ALIGNMENT 317 YS2-15i10.p1k chr02 373 26 225218 225566 C 348 98.28 384 reject_low 38 ALIGNMENT 326 YS2-15i10.q1k chr12 32 379 655006 655354 F 348 98.85 418 reject_low 20 ALIGNMENT 0 YS2-15i10.q1k chr07 418 380 818788 818787 C 39 0.00 418 reject_low 7 ALIGNMENT 323 YS2-15i10.p1k chr12 26 373 477369 477717 F 348 98.85 384 reject_low 31 ALIGNMENT 326 YS2-15i10.q1k chr04 379 32 988110 988458 C 348 98.85 418 reject_low 16 ALIGNMENT 317 YS2-15i10.p1k chr07 373 26 539946 540294 C 348 98.28 384 reject_low 40 ALIGNMENT 0 YS2-15i10.q1k chr13 380 418 188694 188693 F 39 0.00 418 manual 0 ALIGNMENT 323 YS2-15i10.p1k chr07 26 373 563238 563586 F 348 98.85 384 reject_low 29 ALIGNMENT 0 YS2-15i10.q1k chr15 380 418 122232 122231 F 39 0.00 418 reject_low 11 ALIGNMENT 332 YS2-15i10.q1k chr16 32 379 848593 848941 F 348 99.43 418 reject_low 14 ALIGNMENT 323 YS2-15i10.p1k chr15 373 26 121884 122232 C 348 98.85 384 reject_low 34 ALIGNMENT 0 YS2-15i10.q1k chr16 380 418 60981 60980 F 39 0.00 418 reject_low 13 ALIGNMENT 323 YS2-15i10.p1k chr04 373 26 1099944 1100292 C 348 98.85 384 reject_low 27 ALIGNMENT 296 YS2-15i10.q1k chr10 32 379 476559 476907 F 348 95.98 418 manual 1 ALIGNMENT 0 YS2-15i10.q1k chr04 418 380 988111 988110 C 39 0.00 418 reject_low 16 ALIGNMENT 0 YS2-15i10.q1k chr16 418 380 806033 806032 C 39 0.00 418 reject_low 23 ALIGNMENT 332 YS2-15i10.q1k chr12 379 32 477369 477717 C 348 99.43 418 reject_low 8 ALIGNMENT 0 YS2-15i10.q1k chr04 418 380 646889 646888 C 39 0.00 418 reject_low 3 ALIGNMENT 285 YS2-15i10.p1k chr16 26 365 852020 852359 F 340 95.88 384 reject_low 47 ALIGNMENT 0 YS2-15i10.p1k chr16 366 384 806371 806370 F 19 0.00 384 reject_low 46 ALIGNMENT 0 YS2-15i11.q1k chrm 313 62 9089 9088 C 252 0.00 1352 reject_low 20 ALIGNMENT 0 YS2-15i11.q1k chrm 62 313 52319 52318 F 252 0.00 1352 reject_low 17 ALIGNMENT 0 YS2-15i11.q1k chrm 885 371 11506 11505 C 515 0.00 1352 reject_low 31 ALIGNMENT 48 YS2-15i11.p1k chrm 615 668 46303 46356 F 54 96.30 1288 reject_low 22 ALIGNMENT 49 YS2-15i11.q1k chrm 370 314 9031 9088 C 57 96.49 1352 reject_low 20 ALIGNMENT 0 YS2-15i11.p1k chrm 62 617 69434 69433 F 556 0.00 1288 reject_low 14 ALIGNMENT 0 YS2-15i11.q1k chrm 885 379 69435 69434 C 507 0.00 1352 reject_low 12 ALIGNMENT 0 YS2-15i11.p1k chrm 62 626 48102 48101 F 565 0.00 1288 reject_low 24 ALIGNMENT 128 YS2-15i11.p1k vc_7 971 1185 100 326 F 215 88.37 1288 reject_low 4 ALIGNMENT 0 YS2-15i11.p1k chrm 888 672 57028 57027 C 217 0.00 1288 reject_low 17 ALIGNMENT 0 YS2-15i11.q1k chrm 272 62 69148 69147 C 211 0.00 1352 reject_low 15 ALIGNMENT 0 YS2-15i11.q1k vc_4 62 1004 126 125 F 943 0.00 1352 reject_low 8 ALIGNMENT 37 YS2-15i11.p1k chrm 627 668 48102 48143 F 42 100.00 1288 reject_low 24 ALIGNMENT 0 YS2-15i11.p1k chrm 671 888 52815 52814 F 218 0.00 1288 reject_low 34 ALIGNMENT 0 YS2-15i11.p1k chrm 62 572 66771 66770 F 511 0.00 1288 reject_low 9 ALIGNMENT 0 YS2-15i11.p1k chrm 677 888 76644 76643 F 212 0.00 1288 reject_low 21 ALIGNMENT 0 YS2-15i11.p1k chrm 62 625 69053 69052 F 564 0.00 1288 reject_low 12 ALIGNMENT 47 YS2-15i11.q1k chrm 322 370 71208 71256 F 49 100.00 1352 reject_low 1,2 ALIGNMENT 0 YS2-15i11.p1k chrm 62 625 83053 83052 F 564 0.00 1288 reject_low 32 ALIGNMENT 48 YS2-15i11.q1k vc_4 1092 1005 1446 1534 C 88 80.68 1352 reject_low 10 ALIGNMENT 0 YS2-15i11.q1k chrm 885 382 46304 46303 C 504 0.00 1352 reject_low 26 ALIGNMENT 0 YS2-15i11.q1k chrm 319 62 76645 76644 C 258 0.00 1352 reject_low 9 ALIGNMENT 36 YS2-15i11.q1k chrm 369 326 52772 52815 C 44 97.73 1352 reject_low 24 ALIGNMENT 0 YS2-15i11.q1k chrm 378 885 2801 2800 F 508 0.00 1352 reject_low 13 ALIGNMENT 0 YS2-15i11.q1k chrm 321 62 77720 77719 C 260 0.00 1352 reject_low 21 ALIGNMENT 0 YS2-15i11.p1k chrm 675 888 77719 77718 F 214 0.00 1288 reject_low 23 ALIGNMENT 273 YS2-15i11.p1k chrm 418 31 75902 76290 C 388 99.48 1288|1,0 accept 0 reject_low 1 ALIGNMENT 54 YS2-15i11.q1k chrm 379 320 8226 8285 C 60 96.67 1352 reject_low 19 ALIGNMENT 0 YS2-15i11.p1k chrm 888 677 2744 2743 C 212 0.00 1288 reject_low 28 ALIGNMENT 0 YS2-15i11.q1k chrm 580 885 75872 75871 F 306 0.00 1352 accept 0 ALIGNMENT 0 YS2-15i11.q1k chrm 325 62 81448 81447 C 264 0.00 1352 reject_low 14,23 ALIGNMENT 0 YS2-15i11.q1k chrm 885 378 76588 76587 C 508 0.00 1352 reject_low 9 ALIGNMENT 47 YS2-15i11.p1k chrm 619 674 77664 77719 F 56 94.64 1288 reject_low 23 ALIGNMENT 0 YS2-15i11.q1k chrm 62 285 9445 9444 F 224 0.00 1352 reject_low 16 ALIGNMENT 0 YS2-15i11.p1k chrm 62 618 76587 76586 F 557 0.00 1288 reject_low 21 ALIGNMENT 0 YS2-15i11.q1k vc_4 1004 62 5813 5812 C 943 0.00 1352 reject_low 7 ALIGNMENT 45 YS2-15i11.q1k chrm 378 277 69434 69537 C 102 85.29 1352 reject_low 12 ALIGNMENT 44 YS2-15i11.q1k chrm 375 328 2089 2136 C 48 97.92 1352 reject_low 30 ALIGNMENT 39 YS2-15i11.p1k chrm 627 670 81404 81447 F 44 100.00 1288 reject_low 33 ALIGNMENT 53 YS2-15i11.p1k chrm 710 619 9445 9539 C 92 86.96 1288 reject_low 13 ALIGNMENT 0 YS2-15i11.q1k chrm 327 62 46357 46356 C 266 0.00 1352 reject_low 26 ALIGNMENT 0 YS2-15i11.p1k chrm 615 62 57084 57083 C 554 0.00 1288 reject_low 17 ALIGNMENT 75 YS2-15i11.q1k vc_4 1005 1157 126 286 F 153 81.05 1352 reject_low 8 ALIGNMENT 128 YS2-15i11.p1k vc_7 971 1185 13562 13788 F 215 88.37 1288 reject_low 5 ALIGNMENT 75 YS2-15i11.q1k vc_4 1005 1157 6353 6513 F 153 81.05 1352 reject_low 6 ALIGNMENT 128 YS2-15i11.p1k vc_4 971 1185 5871 6097 F 215 88.37 1288 reject_low 3 ALIGNMENT 38 YS2-15i11.q1k vc_4 962 1000 5828 5866 F 39 100.00 1352 reject_low 6 ALIGNMENT 0 YS2-15i11.p1k chrm 618 62 2802 2801 C 557 0.00 1288 reject_low 28 ALIGNMENT 45 YS2-15i11.q1k chrm 370 323 11505 11552 C 48 100.00 1352 reject_low 31 ALIGNMENT 265 YS2-15i11.q1k chrm 578 966 75902 76290 F 389 98.46 1352 reject_low 2 ALIGNMENT 0 YS2-15i11.p1k chrm 675 888 53874 53873 F 214 0.00 1288 reject_low 11 ALIGNMENT 45 YS2-15i11.p1k chrm 618 719 69434 69537 F 102 85.29 1288 reject_low 14 ALIGNMENT 0 YS2-15i11.p1k chrm 62 615 3048 3047 F 554 0.00 1288 reject_low 19,20 ALIGNMENT 0 YS2-15i11.p1k chrm 671 888 83097 83096 F 218 0.00 1288 reject_low 32 ALIGNMENT 0 YS2-15i11.p1k chrm 62 618 77664 77663 F 557 0.00 1288 reject_low 23 ALIGNMENT 0 YS2-15i11.q1k chrm 319 62 66877 66876 C 258 0.00 1352 reject_low 11 ALIGNMENT 46 YS2-15i11.q1k chrm 380 328 3048 3101 C 53 96.23 1352 reject_low 27 ALIGNMENT 0 YS2-15i11.q1k chrm 885 381 3049 3048 C 505 0.00 1352 reject_low 27 ALIGNMENT 0 YS2-15i11.p1k chrm 888 419 75903 75902 C 470 0.00 1288 accept 0 ALIGNMENT 0 YS2-15i11.q1k chrm 322 62 11553 11552 C 261 0.00 1352 reject_low 31 ALIGNMENT 0 YS2-15i11.q1k chrm 885 370 52773 52772 C 516 0.00 1352 reject_low 24 ALIGNMENT 0 YS2-15i11.p1k chrm 888 711 9446 9445 C 178 0.00 1288 reject_low 13 ALIGNMENT 45 YS2-15i11.p1k chrm 626 723 69053 69147 F 98 86.73 1288 reject_low 12 ALIGNMENT 0 YS2-15i11.q1k chrm 885 369 53829 53828 C 517 0.00 1352 reject_low 18,22 ALIGNMENT 0 YS2-15i11.p1k chrm 669 888 48143 48142 F 220 0.00 1288 reject_low 24 ALIGNMENT 36 YS2-15i11.p1k chrm 627 670 52772 52815 F 44 97.73 1288 reject_low 34 ALIGNMENT 52 YS2-15i11.p1k chrm 619 676 76587 76644 F 58 96.55 1288 reject_low 21 ALIGNMENT 0 YS2-15i11.p1k chrm 888 675 71209 71208 C 214 0.00 1288 reject_low 29 ALIGNMENT 54 YS2-15i11.p1k chrm 573 676 66771 66876 F 104 85.58 1288 reject_low 9 ALIGNMENT 463 YS2-15i11.q1k chrm 44 579 75337 75872 F 536 100.00 1352 accept 0 ALIGNMENT 41 YS2-15i11.p1k chrm 628 674 53828 53874 F 47 97.87 1288 reject_low 11 ALIGNMENT 463 YS2-15i11.p1k chrm 952 417 75337 75872 C 536 100.00 1288|0,1 reject_low 1 ALIGNMENT 47 YS2-15i11.q1k chrm 377 322 77664 77719 C 56 94.64 1352 reject_low 21 ALIGNMENT 0 YS2-15i11.q1k chrm 885 370 81405 81404 C 516 0.00 1352 reject_low 14,23 ALIGNMENT 0 YS2-15i11.p1k chrm 625 62 71257 71256 C 564 0.00 1288 reject_low 29 ALIGNMENT 0 YS2-15i11.p1k chrm 888 683 52320 52319 C 206 0.00 1288 reject_low 25 ALIGNMENT 0 YS2-15i11.p1k vc_7 62 970 100 99 F 909 0.00 1288 reject_low 4 ALIGNMENT 0 YS2-15i11.p1k chrm 720 888 69537 69536 F 169 0.00 1288 reject_low 14 ALIGNMENT 0 YS2-15i11.p1k chrm 614 62 52387 52386 C 553 0.00 1288 reject_low 25 ALIGNMENT 0 YS2-15i11.p1k chrm 669 888 46356 46355 F 220 0.00 1288 reject_low 22 ALIGNMENT 0 YS2-15i11.q1k vc_4 1004 62 1535 1534 C 943 0.00 1352 reject_low 10 ALIGNMENT 41 YS2-15i11.p1k chrm 626 670 83053 83097 F 45 100.00 1288 reject_low 32 ALIGNMENT 0 YS2-15i11.p1k chrm 677 888 66876 66875 F 212 0.00 1288 reject_low 9 ALIGNMENT 0 YS2-15i11.p1k chrm 689 888 50172 50171 F 200 0.00 1288 reject_low 18 ALIGNMENT 45 YS2-15i11.q1k chrm 370 273 69053 69147 C 98 86.73 1352 reject_low 15 ALIGNMENT 0 YS2-15i11.p1k chrm 724 888 69147 69146 F 165 0.00 1288 reject_low 12 ALIGNMENT 53 YS2-15i11.q1k chrm 286 377 9445 9539 F 92 86.96 1352 reject_low 16 ALIGNMENT 0 YS2-15i11.p1k chrm 62 626 81404 81403 F 565 0.00 1288 reject_low 33 ALIGNMENT 0 YS2-15i11.q1k chrm 371 885 71256 71255 F 515 0.00 1352 reject_low 1 ALIGNMENT 0 YS2-15i11.q1k vc_4 62 961 5828 5827 F 900 0.00 1352 reject_low 6 ALIGNMENT 0 YS2-15i11.q1k chrm 321 62 53875 53874 C 260 0.00 1352 reject_low 18,22 ALIGNMENT 0 YS2-15i11.q1k chrm 327 62 2137 2136 C 266 0.00 1352 reject_low 30 ALIGNMENT 0 YS2-15i11.p1k chrm 618 62 9540 9539 C 557 0.00 1288 reject_low 13 ALIGNMENT 0 YS2-15i11.p1k chrm 62 626 52772 52771 F 565 0.00 1288 reject_low 34 ALIGNMENT 0 YS2-15i11.p1k chrm 62 627 53828 53827 F 566 0.00 1288 reject_low 11 ALIGNMENT 0 YS2-15i11.p1k chrm 671 888 81447 81446 F 218 0.00 1288 reject_low 33 ALIGNMENT 0 YS2-15i11.q1k chrm 382 885 52386 52385 F 504 0.00 1352 reject_low 17 ALIGNMENT 0 YS2-15i11.p1k vc_7 62 970 13562 13561 F 909 0.00 1288 reject_low 5 ALIGNMENT 51 YS2-15i11.p1k chrm 619 688 50103 50172 F 70 91.43 1288 reject_low 18 ALIGNMENT 41 YS2-15i11.q1k chrm 368 322 53828 53874 C 47 97.87 1352 reject_low 18,22 ALIGNMENT 48 YS2-15i11.p1k chrm 676 619 2743 2801 C 58 94.83 1288 reject_low 28 ALIGNMENT 80 YS2-15i11.q1k vc_4 1182 1005 5622 5812 C 178 81.46 1352 reject_low 7 ALIGNMENT 0 YS2-15i11.q1k chrm 885 378 77665 77664 C 508 0.00 1352 reject_low 21 ALIGNMENT 0 YS2-15i11.p1k chrm 62 618 50103 50102 F 557 0.00 1288 reject_low 18 ALIGNMENT 0 YS2-15i11.q1k vc_4 1001 1004 5867 6352 F 4 0.00 1352 reject_low 6 ALIGNMENT 48 YS2-15i11.q1k chrm 381 328 46303 46356 C 54 96.30 1352 reject_low 26 ALIGNMENT 0 YS2-15i11.q1k chrm 885 376 2090 2089 C 510 0.00 1352 reject_low 30 ALIGNMENT 39 YS2-15i11.q1k chrm 369 326 81404 81447 C 44 100.00 1352 reject_low 14,23 ALIGNMENT 0 YS2-15i11.q1k chrm 319 62 8286 8285 C 258 0.00 1352 reject_low 19 ALIGNMENT 0 YS2-15i11.q1k chrm 62 321 71208 71207 F 260 0.00 1352 reject_low 1,2 ALIGNMENT 0 YS2-15i11.q1k chrm 371 577 71257 75901 F 207 0.00 1352 reject_low 2 ALIGNMENT 45 YS2-15i11.p1k chrm 671 616 57027 57083 C 56 94.64 1288 reject_low 17 ALIGNMENT 0 YS2-15i11.q1k chrm 885 380 8227 8226 C 506 0.00 1352 reject_low 19 ALIGNMENT 54 YS2-15i11.q1k chrm 423 320 66771 66876 C 104 85.58 1352 reject_low 11 ALIGNMENT 0 YS2-15i11.q1k chrm 885 371 69054 69053 C 515 0.00 1352 reject_low 15 ALIGNMENT 0 YS2-15i11.p1k chrm 62 614 46303 46302 F 553 0.00 1288 reject_low 22 ALIGNMENT 0 YS2-15i11.p1k chrm 669 888 3101 3100 F 220 0.00 1288 reject_low 19,20 ALIGNMENT 47 YS2-15i11.p1k chrm 674 626 71208 71256 C 49 100.00 1288 reject_low 29 ALIGNMENT 0 YS2-15i11.p1k vc_4 62 970 5871 5870 F 909 0.00 1288 reject_low 3 ALIGNMENT 0 YS2-15i11.q1k chrm 276 62 69538 69537 C 215 0.00 1352 reject_low 12 ALIGNMENT 48 YS2-15i11.q1k chrm 320 377 2743 2801 F 58 94.83 1352 reject_low 13 ALIGNMENT 52 YS2-15i11.q1k chrm 377 320 76587 76644 C 58 96.55 1352 reject_low 9 ALIGNMENT 0 YS2-15i11.q1k chrm 885 424 66772 66771 C 462 0.00 1352 reject_low 11 ALIGNMENT 47 YS2-15i11.p1k chrm 682 615 52319 52386 C 68 91.18 1288 reject_low 25 ALIGNMENT 0 YS2-15i11.q1k chrm 325 62 52816 52815 C 264 0.00 1352 reject_low 24 ALIGNMENT 0 YS2-15i11.p1k chrm 417 418 75872 75902 C 0 0.00 1288 reject_low 1 ALIGNMENT 46 YS2-15i11.p1k chrm 616 668 3048 3101 F 53 96.23 1288 reject_low 19,20 ALIGNMENT 0 YS2-15i11.q1k chrm 327 62 3102 3101 C 266 0.00 1352 reject_low 27 ALIGNMENT 0 YS2-15i11.q1k chrm 378 885 9539 9538 F 508 0.00 1352 reject_low 16 ALIGNMENT 47 YS2-15i11.q1k chrm 314 381 52319 52386 F 68 91.18 1352 reject_low 17 ALIGNMENT 0 YS2-15i11.q1k chrm 885 371 9032 9031 C 515 0.00 1352 reject_low 20 ALIGNMENT 0 YS2-15i11.q1k chrm 62 319 2743 2742 F 258 0.00 1352 reject_low 13 ALIGNMENT 976 YS2-15i12.p1k chr07 31 1217 174046 175237 F 1187 94.95 1330 accept 0 ALIGNMENT 943 YS2-15i12.q1k chr07 1100 44 176001 177071 C 1057 96.78 1363 accept 0 ALIGNMENT 565 YS2-15i19.p1k chr04 629 30 588202 588801 C 600 98.83 647 accept 0 ALIGNMENT 0 YS2-15i19.p1k chr04 647 630 588203 588202 C 18 0.00 647 accept 0 ALIGNMENT 886 YS2-15i20.q1k chr11 42 1157 463259 464397 F 1116 93.82 1158 accept 0 ALIGNMENT 959 YS2-15i20.p1k chr11 1118 38 465016 466101 C 1081 97.13 1290 accept 0 ALIGNMENT 975 YS2-15i21.p1k chr07 1227 29 45120 46306 C 1199 95.75 1227 accept 0 ALIGNMENT 929 YS2-15i21.q1k chr07 40 1101 44445 45510 F 1062 96.99 1191 accept 0 ALIGNMENT 986 YS2-15i24.q1k chr07 47 1175 975862 976973 F 1129 97.52 1200 accept 0 ALIGNMENT 976 YS2-15i24.p1k chr07 1134 39 980339 981431 C 1096 97.17 1140 accept 0 ALIGNMENT 0 YS2-15j01.q1k chr12 62 567 489348 489347 F 506 0.00 1277 reject_low 3 ALIGNMENT 0 YS2-15j01.q1k chr12 687 803 472582 472581 F 117 0.00 1277 reject_low 5 ALIGNMENT 0 YS2-15j01.q1k chr06 803 309 31623 31622 C 495 0.00 1277 reject_low 4 ALIGNMENT 0 YS2-15j01.q1k chr06 200 62 31730 31729 C 139 0.00 1277 reject_low 4 ALIGNMENT 0 YS2-15j01.q1k chr12 62 567 482044 482043 F 506 0.00 1277 reject_low 6 ALIGNMENT 94 YS2-15j01.q1k chr06 308 201 31622 31729 C 108 98.15 1277 reject_low 4 ALIGNMENT 0 YS2-15j01.q1k chr12 687 803 485814 485813 F 117 0.00 1277 reject_low 7 ALIGNMENT 0 YS2-15j01.q1k chr12 702 803 489481 489480 F 102 0.00 1277 reject_low 3 ALIGNMENT 0 YS2-15j01.q1k chr12 687 803 468930 468929 F 117 0.00 1277 reject_low 2 ALIGNMENT 0 YS2-15j01.q1k chr12 62 567 485696 485695 F 506 0.00 1277 reject_low 7 ALIGNMENT 119 YS2-15j01.q1k chr12 568 686 472464 472582 F 119 100.00 1277 reject_low 5 ALIGNMENT 119 YS2-15j01.q1k chr12 568 686 482044 482162 F 119 100.00 1277 reject_low 6 ALIGNMENT 0 YS2-15j01.q1k chr12 62 567 472464 472463 F 506 0.00 1277 reject_low 5 ALIGNMENT 0 YS2-15j01.q1k chr12 687 803 482162 482161 F 117 0.00 1277 reject_low 6 ALIGNMENT 1027 YS2-15j01.p1k chr12 1183 26 464399 465548 C 1158 97.06 1192 accept 0 ALIGNMENT 128 YS2-15j01.q1k chr12 568 701 489348 489481 F 134 98.51 1277 reject_low 3 ALIGNMENT 875 YS2-15j01.q1k chr12 28 1079 459135 460202 F 1052 96.10 1277 accept 0 ALIGNMENT 1027 YS2-15j01.p1k chr12 1183 26 455262 456411 C 1158 97.06 1192 reject_low 1 ALIGNMENT 625 YS2-15j01.q1k chr12 28 686 468272 468930 F 659 99.39 1277 reject_low 2 ALIGNMENT 119 YS2-15j01.q1k chr12 568 686 485696 485814 F 119 100.00 1277 reject_low 7 ALIGNMENT 497 YS2-15j03.q1k chr05 58 777 452151 452851 F 720 92.22 1278 accept 0 ALIGNMENT 988 YS2-15j03.p1k chr05 1163 29 455372 456521 C 1135 96.74 1304 accept 0 ALIGNMENT 995 YS2-15j05.p1k chr05 1284 36 540371 541608 C 1249 95.20 1304 accept 0 ALIGNMENT 977 YS2-15j06.q1k chr14 1152 48 276970 278072 C 1105 96.56 1162 accept 0 ALIGNMENT 894 YS2-15j06.p1k chr14 35 1045 274027 275048 F 1011 96.83 1237 accept 0 ALIGNMENT 986 YS2-15j07.p1k chr15 35 1206 835470 836655 F 1172 95.31 1253 accept 0 ALIGNMENT 1031 YS2-15j07.q1k chr15 1172 43 840361 841497 C 1130 97.96 1309 accept 0 ALIGNMENT 344 YS2-15j08.q1k chr05 511 53 85676 86134 C 459 91.72 1327 reject_low 1 ALIGNMENT 984 YS2-15j08.p1k chr10 1147 29 526562 527696 C 1119 96.25 1243 accept 0 ALIGNMENT 0 YS2-15j08.q1k chr05 832 512 85677 85676 C 321 0.00 1327 reject_low 1 ALIGNMENT 987 YS2-15j08.q1k chr10 42 1144 524826 525932 F 1103 96.92 1327 accept 0 ALIGNMENT 944 YS2-15j09.p1k chr10 1114 37 508624 509710 C 1078 96.85 1287 accept 0 ALIGNMENT 154 YS2-15j10.p1k chr12 201 37 459838 460001 C 165 99.39 219 accept_chi 1 ALIGNMENT 0 YS2-15j10.p1k chr12 219 202 459839 459838 C 18 0.00 219 accept_chi 1 ALIGNMENT 843 YS2-15j10.q1k chr09 1057 32 272776 273802 C 1026 95.52 1397 accept_chi 0 ALIGNMENT 763 YS2-15j11.q1k chr04 836 40 383987 384783 C 797 99.37 1387|11,0 accept 0 ALIGNMENT 0 YS2-15j11.q1k chr04 509 488 384008 384173 C 22 0.00 1387 reject_low 12 ALIGNMENT 23 YS2-15j11.q1k chr04 555 512 384142 384185 C 44 84.09 1387 reject_low 3 ALIGNMENT 27 YS2-15j11.q1k chr04 515 470 383966 384011 C 46 86.96 1387 reject_low 16 ALIGNMENT 0 YS2-15j11.q1k chr04 811 495 384408 384454 C 317 0.00 1387 reject_low 8 ALIGNMENT 0 YS2-15j11.q1k chr04 780 516 383563 383965 C 265 0.00 1387 reject_low 16 ALIGNMENT 0 YS2-15j11.q1k chr04 914 915 383555 384304 C 0 0.00 1387 reject_low 8 ALIGNMENT 61 YS2-15j11.q1k chr04 368 292 383345 383421 C 77 94.81 1387|0,12 reject_low 9 ALIGNMENT 0 YS2-15j11.q1k chr04 361 362 383532 383903 C 0 0.00 1387 reject_low 14 ALIGNMENT 33 YS2-15j11.q1k chr04 567 529 383398 383436 C 39 94.87 1387 reject_low 11,14 ALIGNMENT 35 YS2-15j11.q1k chr04 943 906 383526 383563 C 38 97.37 1387|0,9 reject_low 8,10 ALIGNMENT 0 YS2-15j11.q1k chr04 537 363 384592 384604 C 175 0.00 1387 reject_low 10 ALIGNMENT 0 YS2-15j11.q1k chr04 556 557 383553 383960 C 0 0.00 1387 reject_low 17 ALIGNMENT 0 YS2-15j11.q1k chr04 416 417 383531 383956 C 0 0.00 1387 reject_low 13 ALIGNMENT 0 YS2-15j11.q1k chr04 576 228 384409 384451 C 349 0.00 1387 reject_low 4 ALIGNMENT 0 YS2-15j11.q1k chr04 663 568 383716 383949 C 96 0.00 1387 reject_low 12 ALIGNMENT 0 YS2-15j11.q1k chr04 231 228 384286 384451 C 4 0.00 1387 reject_low 9 ALIGNMENT 0 YS2-15j11.q1k chr04 511 62 384186 384185 C 450 0.00 1387 reject_low 3 ALIGNMENT 110 YS2-15j11.q1k chr04 837 664 383542 383715 C 174 88.51 1387|12,0 reject_low 12 ALIGNMENT 0 YS2-15j11.q1k chr04 825 826 383410 383997 C 0 0.00 1387 accept 0 ALIGNMENT 0 YS2-15j11.q1k chr04 429 430 383410 383517 C 0 0.00 1387 reject_low 13 ALIGNMENT 0 YS2-15j11.q1k chr04 895 870 384288 384475 C 26 0.00 1387 reject_low 6 ALIGNMENT 0 YS2-15j11.q1k chr04 905 568 383399 383398 C 338 0.00 1387 reject_low 11,14 ALIGNMENT 0 YS2-15j11.q1k chr04 905 837 383508 383507 C 69 0.00 1387 reject_low 16 ALIGNMENT 0 YS2-15j11.q1k chr04 469 441 384012 383986 C 29 0.00 1387 reject_low 16 ALIGNMENT 45 YS2-15j11.q1k chr04 873 814 383914 383973 C 60 93.33 1387 reject_low 10 ALIGNMENT 37 YS2-15j11.q1k chr04 944 896 384239 384287 C 49 91.84 1387 reject_low 4,6 ALIGNMENT 0 YS2-15j11.q1k chr04 303 304 383410 384213 C 0 0.00 1387 reject_low 9 ALIGNMENT 84 YS2-15j11.q1k chr04 923 812 384296 384407 C 112 92.86 1387|9,0 reject_low 8 ALIGNMENT 0 YS2-15j11.q1k chr04 815 816 383420 383563 C 0 0.00 1387 reject_low 7 ALIGNMENT 0 YS2-15j11.q1k chr04 881 837 383516 383506 C 45 0.00 1387 reject_low 18 ALIGNMENT 0 YS2-15j11.q1k chr04 368 262 383363 383397 C 107 0.00 1387 reject_low 5 ALIGNMENT 21 YS2-15j11.q1k chr04 440 415 383507 383532 C 26 96.15 1387|11,2 reject_low 13 ALIGNMENT 102 YS2-15j11.q1k chr04 817 418 383562 383973 C 400 76.25 1387|2,0 reject_low 7 ALIGNMENT 20 YS2-15j11.q1k chr04 131 53 383582 383660 C 79 75.95 1387 reject_low 5 ALIGNMENT 0 YS2-15j11.q1k chr04 368 369 383363 383344 C 0 0.00 1387 reject_low 9 ALIGNMENT 0 YS2-15j11.q1k chr04 417 418 383974 383955 C 0 0.00 1387 reject_low 7 ALIGNMENT 34 YS2-15j11.q1k chr04 567 510 383950 384007 C 58 86.21 1387|11,0 reject_low 12,15,17 ALIGNMENT 23 YS2-15j11.q1k chr04 440 416 383987 384011 C 25 100.00 1387|11,0 reject_low 15,16,17,18 ALIGNMENT 56 YS2-15j11.q1k chr04 634 538 384495 384591 C 97 86.60 1387 reject_low 10 ALIGNMENT 30 YS2-15j11.q1k chr04 417 362 383956 384011 C 56 85.71 1387|1,4 reject_low 7,13 ALIGNMENT 39 YS2-15j11.q1k chr04 600 546 383509 383563 C 55 90.91 1387|0,11 reject_low 17 ALIGNMENT 0 YS2-15j11.q1k chr04 786 556 383485 384141 C 231 0.00 1387 reject_low 3 ALIGNMENT 0 YS2-15j11.q1k chr04 429 430 383836 383997 C 0 0.00 1387 reject_low 18 ALIGNMENT 0 YS2-15j11.q1k chr04 905 414 383319 383318 C 492 0.00 1387 reject_low 5,9 ALIGNMENT 0 YS2-15j11.q1k chr04 855 62 384634 384633 C 794 0.00 1387 reject_low 2 ALIGNMENT 0 YS2-15j11.q1k chr04 94 62 384729 384728 C 33 0.00 1387 reject_low 1 ALIGNMENT 0 YS2-15j11.q1k chr04 905 585 383256 383255 C 321 0.00 1387 reject_low 13 ALIGNMENT 0 YS2-15j11.q1k chr04 825 826 383410 383553 C 0 0.00 1387 reject_low 12 ALIGNMENT 40 YS2-15j11.q1k chr04 487 415 384174 384246 C 73 86.30 1387 reject_low 12 ALIGNMENT 0 YS2-15j11.q1k chr04 905 814 383459 383458 C 92 0.00 1387 reject_low 3 ALIGNMENT 31 YS2-15j11.q1k chr04 261 200 383398 383459 C 62 83.87 1387 reject_low 5 ALIGNMENT 0 YS2-15j11.q1k chr04 415 292 384012 383991 C 124 0.00 1387 reject_low 15,16,17,18 ALIGNMENT 42 YS2-15j11.q1k chr04 944 856 384545 384633 C 89 83.15 1387 reject_low 2 ALIGNMENT 0 YS2-15j11.q1k chr04 528 453 383437 383440 C 76 0.00 1387 reject_low 11,14 ALIGNMENT 24 YS2-15j11.q1k chr04 836 781 383507 383562 C 56 82.14 1387 reject_low 16,18 ALIGNMENT 0 YS2-15j11.q1k chr04 251 228 384032 384451 C 24 0.00 1387 reject_low 14,15,16,17,18 ALIGNMENT 29 YS2-15j11.q1k chr04 413 369 383318 383362 C 45 88.89 1387 reject_low 5,9 ALIGNMENT 27 YS2-15j11.q1k chr04 227 190 384452 384489 C 38 92.11 1387 reject_low 4,7,9,11,12,13,14,15,16,17,18 ALIGNMENT 0 YS2-15j11.q1k chr04 905 874 383564 383913 C 32 0.00 1387 reject_low 10 ALIGNMENT 49 YS2-15j11.q1k chr04 361 292 383904 383973 C 70 91.43 1387 reject_low 14 ALIGNMENT 0 YS2-15j11.q1k chr04 365 366 384008 384331 C 0 0.00 1387 reject_low 7,13 ALIGNMENT 0 YS2-15j11.q1k chr04 333 62 384634 384633 C 272 0.00 1387 reject_low 6,8,10 ALIGNMENT 22 YS2-15j11.q1k chr04 291 252 383992 384031 C 40 85.00 1387 reject_low 14,15,16,17,18 ALIGNMENT 0 YS2-15j11.q1k chr04 509 441 384008 383986 C 69 0.00 1387 reject_low 15,17 ALIGNMENT 43 YS2-15j11.q1k chr04 291 240 383512 383563 C 52 94.23 1387 reject_low 11 ALIGNMENT 0 YS2-15j11.q1k chr04 365 363 384584 384604 C 3 0.00 1387 reject_low 8 ALIGNMENT 21 YS2-15j11.q1k chr04 813 787 383458 383484 C 27 92.59 1387 reject_low 3 ALIGNMENT 46 YS2-15j11.q1k chr04 869 812 384476 384533 C 58 94.83 1387 reject_low 6 ALIGNMENT 0 YS2-15j11.q1k chr04 291 292 383974 383991 C 0 0.00 1387 reject_low 14 ALIGNMENT 0 YS2-15j11.q1k chr04 881 601 383516 383508 C 281 0.00 1387 reject_low 17 ALIGNMENT 27 YS2-15j11.q1k chr04 929 882 383468 383515 C 48 85.42 1387 reject_low 17,18 ALIGNMENT 58 YS2-15j11.q1k chr04 926 814 383309 383421 C 113 84.96 1387|0,12 accept 0 reject_low 7,12 ALIGNMENT 0 YS2-15j11.q1k chr04 239 228 383564 384451 C 12 0.00 1387 reject_low 11 ALIGNMENT 951 YS2-15j11.p1k chr04 33 1208 380187 381384 F 1176 94.64 1261 accept 0 ALIGNMENT 79 YS2-15j11.q1k chr04 494 366 384455 384583 C 129 89.15 1387 reject_low 8 ALIGNMENT 0 YS2-15j11.q1k chr04 189 62 384490 384489 C 128 0.00 1387 reject_low 4,7,9,11,12,13,14,15,16,17,18 ALIGNMENT 28 YS2-15j11.q1k chr04 508 418 383757 383847 C 91 79.12 1387|0,12 reject_low 18 ALIGNMENT 741 YS2-15j11.q1k chr04 1255 95 383612 384728 C 1161 91.13 1387 reject_low 1 ALIGNMENT 40 YS2-15j11.q1k chr04 649 577 384336 384408 C 73 86.30 1387 reject_low 4 ALIGNMENT 55 YS2-15j11.q1k chr04 314 232 384203 384285 C 83 89.16 1387|11,0 reject_low 9 ALIGNMENT 0 YS2-15j11.q1k chr04 199 132 383460 383581 C 68 0.00 1387 reject_low 5 ALIGNMENT 83 YS2-15j11.q1k chr04 368 240 384329 384457 C 129 89.92 1387|3,0 reject_low 7,12,13 ALIGNMENT 35 YS2-15j11.q1k chr04 963 883 383788 383868 C 81 81.48 1387 reject_low 15 ALIGNMENT 0 YS2-15j11.q1k chr04 239 228 384458 384451 C 12 0.00 1387 reject_low 7,12,13 ALIGNMENT 86 YS2-15j11.q1k chr04 584 418 383255 383421 C 167 84.43 1387|0,12 reject_low 13 ALIGNMENT 0 YS2-15j11.q1k chr04 780 509 383563 383756 C 272 0.00 1387 reject_low 18 ALIGNMENT 25 YS2-15j11.q1k chr04 362 334 384605 384633 C 29 96.55 1387 reject_low 6,8,10 ALIGNMENT 0 YS2-15j11.q1k chr04 813 635 383974 384494 C 179 0.00 1387 reject_low 10 ALIGNMENT 0 YS2-15j11.q1k chr04 360 292 383533 383511 C 69 0.00 1387 reject_low 11 ALIGNMENT 0 YS2-15j11.q1k chr04 895 650 384288 384335 C 246 0.00 1387 reject_low 4 ALIGNMENT 0 YS2-15j11.q1k chr04 414 369 384247 384328 C 46 0.00 1387 reject_low 12 ALIGNMENT 41 YS2-15j11.q1k chr04 452 361 383441 383532 C 92 82.61 1387|0,1 reject_low 11,14 ALIGNMENT 0 YS2-15j11.q1k chr04 882 568 383869 383949 C 315 0.00 1387 reject_low 15 ALIGNMENT 0 YS2-15j11.q1k chr04 811 363 384534 384604 C 449 0.00 1387 reject_low 6 ALIGNMENT 872 YS2-15j12.q1k chr09 1001 38 272823 273802 C 964 97.93 1314 accept 0 ALIGNMENT 922 YS2-15j12.p1k chr09 33 1102 269875 270952 F 1070 95.79 1312 accept 0 ALIGNMENT 183 YS2-15j14.q1k vc_2 208 617 2227 2622 F 410 83.90 1608 reject_low 4 ALIGNMENT 43 YS2-15j14.q1k vc_7 365 314 6360 6410 C 52 96.15 1608 reject_low 7 ALIGNMENT 0 YS2-15j14.q1k vc_7 621 618 4700 4923 C 4 0.00 1608 reject_low 7 ALIGNMENT 183 YS2-15j14.q1k vc_1 208 617 2594 2989 F 410 83.90 1608 reject_low 3 ALIGNMENT 56 YS2-15j14.q1k vc_7 743 622 4583 4699 C 122 84.43 1608 reject_low 7 ALIGNMENT 100 YS2-15j14.q1k vc_7 617 370 4924 5166 C 248 81.45 1608 reject_low 7 ALIGNMENT 0 YS2-15j14.q1k vc_7 369 366 5167 6359 C 4 0.00 1608 reject_low 7 ALIGNMENT 234 YS2-15j14.q1k vc_4 743 208 5232 5749 C 536 83.77 1608 reject_low 2 ALIGNMENT 267 YS2-15j14.q1k vc_7 783 208 2109 2664 C 576 84.38 1608 reject_vc 1 ALIGNMENT 82 YS2-15j14.q1k vc_4 625 783 1879 2032 F 159 86.16 1608 reject_low 6 ALIGNMENT 183 YS2-15j14.q1k vc_3 208 617 2594 2989 F 410 83.90 1608 reject_low 5 ALIGNMENT 267 YS2-15j14.q1k vc_5 208 783 2461 3016 F 576 84.38 1608 reject_vc 0 ALIGNMENT 972 YS2-15j15.p1k chr13 35 1179 369879 371023 F 1145 95.98 1356 accept 0 ALIGNMENT 40 YS2-15j17.q1k vc_3 245 206 2472 2511 C 40 100.00 245 reject_low 4 ALIGNMENT 0 YS2-15j17.q1k vc_5 206 62 37 36 C 145 0.00 245 reject_low 8 ALIGNMENT 0 YS2-15j17.p1k chr15 199 215 827837 827836 F 17 0.00 215 accept_chi 0 ALIGNMENT 40 YS2-15j17.q1k vc_4 206 245 5832 5871 F 40 100.00 245 reject_low 5 ALIGNMENT 167 YS2-15j17.q1k chr15 206 37 827668 827837 C 170 100.00 245 accept_chi 1 ALIGNMENT 0 YS2-15j17.q1k vc_1 205 62 2512 2511 C 144 0.00 245 reject_low 2 ALIGNMENT 40 YS2-15j17.q1k vc_1 245 206 2472 2511 C 40 100.00 245 reject_low 2 ALIGNMENT 0 YS2-15j17.q1k vc_3 205 62 2512 2511 C 144 0.00 245 reject_low 4 ALIGNMENT 0 YS2-15j17.q1k vc_7 62 207 13525 13524 F 146 0.00 245 reject_low 7 ALIGNMENT 0 YS2-15j17.q1k vc_5 206 62 5064 5063 C 145 0.00 245 reject_low 6 ALIGNMENT 0 YS2-15j17.q1k vc_4 62 205 5832 5831 F 144 0.00 245 reject_low 5 ALIGNMENT 167 YS2-15j17.p1k chr15 29 198 827668 827837 F 170 100.00 215 accept_chi 0 ALIGNMENT 0 YS2-15j17.q1k vc_2 205 62 2145 2144 C 144 0.00 245 reject_low 3 ALIGNMENT 36 YS2-15j17.q1k vc_5 242 207 1 36 C 36 100.00 245 reject_low 8 ALIGNMENT 38 YS2-15j17.q1k vc_7 208 245 13525 13562 F 38 100.00 245 reject_low 7 ALIGNMENT 39 YS2-15j17.q1k vc_5 245 207 5025 5063 C 39 100.00 245 reject_low 6 ALIGNMENT 0 YS2-15j17.q1k chr15 245 207 827669 827668 C 39 0.00 245 accept_chi 1 ALIGNMENT 40 YS2-15j17.q1k vc_2 245 206 2105 2144 C 40 100.00 245 reject_low 3 ALIGNMENT 0 YS2-15j18.p1k chr12 203 185 465906 465905 C 19 0.00 203 accept 0 ALIGNMENT 142 YS2-15j18.p1k chr12 184 38 465905 466051 C 147 100.00 203 accept 0 ALIGNMENT 0 YS2-15j18.q1k chr12 122 221 465909 465908 F 100 0.00 1351 reject_low 3 ALIGNMENT 142 YS2-15j18.p1k chr12 184 38 456768 456914 C 147 100.00 203 reject_low 1 ALIGNMENT 80 YS2-15j18.q1k chr16 183 66 488964 489079 C 118 93.22 1351 reject_low 2 ALIGNMENT 0 YS2-15j18.p1k chr12 203 185 456769 456768 C 19 0.00 203 reject_low 1 ALIGNMENT 70 YS2-15j18.q1k chr12 222 368 456772 456904 F 147 87.76 1351 accept 0 ALIGNMENT 0 YS2-15j18.q1k chr12 122 221 456772 456771 F 100 0.00 1351 accept 0 ALIGNMENT 70 YS2-15j18.q1k chr12 222 368 465909 466041 F 147 87.76 1351 reject_low 3 ALIGNMENT 374 YS2-15j19.q1k chr07 519 10 1013116 1013624 C 510 92.16 1268 accept 0 ALIGNMENT 858 YS2-15j19.p1k chr07 44 1114 1008698 1009782 F 1071 94.68 1269 accept 0 ALIGNMENT 41 YS2-15j20.q1k vc_3 824 784 2472 2512 C 41 100.00 1149 reject_low 19 ALIGNMENT 269 YS2-15j20.p1k vc_7 805 1232 13562 13996 F 428 89.25 1285 reject_low 7 ALIGNMENT 221 YS2-15j20.q1k vc_2 824 1132 2164 2466 F 309 92.56 1149 reject_low 10 ALIGNMENT 708 YS2-15j20.p1k chr09 30 786 210722 211477 F 757 98.94 1285 accept_chi 1 ALIGNMENT 0 YS2-15j20.q1k vc_7 825 852 13562 13561 F 28 0.00 1149 reject_low 21 ALIGNMENT 269 YS2-15j20.p1k vc_7 805 1232 100 534 F 428 89.25 1285 reject_low 2 ALIGNMENT 221 YS2-15j20.q1k vc_1 824 1132 2531 2833 F 309 92.56 1149 reject_low 9 ALIGNMENT 221 YS2-15j20.q1k vc_7 1137 824 2421 2727 C 314 92.36 1149 reject_low 2 ALIGNMENT 83 YS2-15j20.q1k vc_4 911 824 1446 1534 C 88 98.86 1149 reject_low 16 ALIGNMENT 216 YS2-15j20.q1k vc_4 1137 824 5504 5812 C 314 92.04 1149 reject_low 12 ALIGNMENT 269 YS2-15j20.p1k vc_2 1232 805 1671 2105 C 428 89.25 1285 reject_low 5 ALIGNMENT 0 YS2-15j20.q1k vc_5 852 825 5026 5025 C 28 0.00 1149 reject_low 20 ALIGNMENT 152 YS2-15j20.q1k vc_4 824 984 6353 6514 F 161 98.76 1149|1,0 reject_low 15 ALIGNMENT 0 YS2-15j20.q1k vc_3 852 825 2473 2472 C 28 0.00 1149 reject_low 19 ALIGNMENT 0 YS2-15j20.q1k vc_4 823 62 1535 1534 C 762 0.00 1149 reject_low 16 ALIGNMENT 0 YS2-15j20.p1k vc_6 62 1033 3585 3584 F 972 0.00 1285 reject_low 13 ALIGNMENT 0 YS2-15j20.q1k vc_7 62 786 13525 13524 F 725 0.00 1149 reject_low 21 ALIGNMENT 0 YS2-15j20.q1k vc_4 823 62 5813 5812 C 762 0.00 1149 reject_low 12 ALIGNMENT 0 YS2-15j20.p1k vc_1 866 836 2442 2441 C 31 0.00 1285 reject_low 23 ALIGNMENT 41 YS2-15j20.q1k vc_2 824 784 2105 2145 C 41 100.00 1149 reject_low 18 ALIGNMENT 0 YS2-15j20.p1k vc_7 62 804 13562 13561 F 743 0.00 1285 reject_low 7 ALIGNMENT 0 YS2-15j20.p1k vc_1 804 62 2473 2472 C 743 0.00 1285 reject_low 23 ALIGNMENT 712 YS2-15j20.q1k chr09 785 30 210722 211477 C 756 99.07 1149 accept_chi 0 ALIGNMENT 0 YS2-15j20.p1k vc_4 62 804 5871 5870 F 743 0.00 1285 reject_low 8 ALIGNMENT 269 YS2-15j20.p1k vc_5 1232 805 4591 5025 C 428 89.25 1285 reject_low 3 ALIGNMENT 269 YS2-15j20.p1k vc_1 1232 805 1671 2105 C 428 89.25 1285 reject_low 4 ALIGNMENT 41 YS2-15j20.q1k vc_4 784 824 5831 5871 F 41 100.00 1149 reject_low 15 ALIGNMENT 269 YS2-15j20.p1k vc_3 1232 805 1671 2105 C 428 89.25 1285 reject_low 6 ALIGNMENT 152 YS2-15j20.q1k vc_4 824 984 126 287 F 161 98.76 1149 reject_low 14 ALIGNMENT 26 YS2-15j20.p1k vc_1 835 805 2441 2472 C 31 96.77 1285 reject_low 23 ALIGNMENT 0 YS2-15j20.q1k vc_4 825 824 5872 6353 F 0 0.00 1149 reject_low 15 ALIGNMENT 0 YS2-15j20.q1k chr09 852 786 210723 210722 C 67 0.00 1149 accept_chi 0 ALIGNMENT 0 YS2-15j20.p1k vc_3 804 62 2106 2105 C 743 0.00 1285 reject_low 6 ALIGNMENT 0 YS2-15j20.q1k vc_7 823 62 2728 2727 C 762 0.00 1149 reject_low 2 ALIGNMENT 0 YS2-15j20.q1k vc_5 785 62 37 36 C 724 0.00 1149 reject_low 22 ALIGNMENT 0 YS2-15j20.q1k vc_1 783 62 2513 2512 C 722 0.00 1149 reject_low 17 ALIGNMENT 0 YS2-15j20.q1k vc_1 62 823 2531 2530 F 762 0.00 1149 reject_low 9 ALIGNMENT 0 YS2-15j20.q1k vc_5 852 822 2 1 C 31 0.00 1149 reject_low 22 ALIGNMENT 0 YS2-15j20.q1k vc_5 62 823 2398 2397 F 762 0.00 1149 reject_low 3 ALIGNMENT 0 YS2-15j20.p1k vc_7 62 804 100 99 F 743 0.00 1285 reject_low 2 ALIGNMENT 0 YS2-15j20.p1k vc_5 804 62 5026 5025 C 743 0.00 1285 reject_low 3 ALIGNMENT 0 YS2-15j20.q1k vc_2 783 62 2146 2145 C 722 0.00 1149 reject_low 18 ALIGNMENT 0 YS2-15j20.p1k vc_1 804 62 2106 2105 C 743 0.00 1285 reject_low 4 ALIGNMENT 41 YS2-15j20.q1k vc_1 824 784 2472 2512 C 41 100.00 1149 reject_low 17 ALIGNMENT 0 YS2-15j20.q1k vc_2 852 825 2106 2105 C 28 0.00 1149 reject_low 18 ALIGNMENT 95 YS2-15j20.p1k vc_6 1034 1232 3585 3790 F 199 84.42 1285 reject_low 13 ALIGNMENT 0 YS2-15j20.p1k vc_3 866 836 2442 2441 C 31 0.00 1285 reject_low 24 ALIGNMENT 0 YS2-15j20.q1k vc_3 783 62 2513 2512 C 722 0.00 1149 reject_low 19 ALIGNMENT 221 YS2-15j20.q1k vc_3 824 1132 2531 2833 F 309 92.56 1149 reject_low 11 ALIGNMENT 0 YS2-15j20.p1k vc_2 804 62 2106 2105 C 743 0.00 1285 reject_low 5 ALIGNMENT 0 YS2-15j20.p1k vc_3 804 62 2473 2472 C 743 0.00 1285 reject_low 24 ALIGNMENT 0 YS2-15j20.q1k vc_1 852 825 2473 2472 C 28 0.00 1149 reject_low 17 ALIGNMENT 26 YS2-15j20.p1k vc_3 835 805 2441 2472 C 31 96.77 1285 reject_low 24 ALIGNMENT 0 YS2-15j20.q1k vc_3 62 823 2531 2530 F 762 0.00 1149 reject_low 11 ALIGNMENT 39 YS2-15j20.q1k vc_5 824 786 5025 5063 C 39 100.00 1149 reject_low 20 ALIGNMENT 0 YS2-15j20.q1k vc_4 62 823 126 125 F 762 0.00 1149 reject_low 14 ALIGNMENT 0 YS2-15j20.q1k vc_5 785 62 5064 5063 C 724 0.00 1149 reject_low 20 ALIGNMENT 254 YS2-15j20.p1k vc_4 805 1153 5871 6219 F 349 92.26 1285 reject_low 8 ALIGNMENT 0 YS2-15j20.q1k vc_4 62 783 5831 5830 F 722 0.00 1149 reject_low 15 ALIGNMENT 0 YS2-15j20.q1k vc_2 62 823 2164 2163 F 762 0.00 1149 reject_low 10 ALIGNMENT 221 YS2-15j20.q1k vc_5 824 1132 2398 2700 F 309 92.56 1149 reject_low 3 ALIGNMENT 38 YS2-15j20.q1k vc_7 787 824 13525 13562 F 38 100.00 1149 reject_low 21 ALIGNMENT 36 YS2-15j20.q1k vc_5 821 786 1 36 C 36 100.00 1149 reject_low 22 ALIGNMENT 0 YS2-15j20.p1k chr09 787 866 211477 211476 F 80 0.00 1285 accept_chi 1 ALIGNMENT 976 YS2-15j21.q1k chr04 47 1201 663912 665078 F 1155 95.93 1208 accept 0 ALIGNMENT 969 YS2-15j21.p1k chr04 1192 40 664554 665711 C 1153 95.84 1227 accept 0 ALIGNMENT 0 YS2-15j22.p1k chr13 269 252 380978 380977 C 18 0.00 269 accept_chi 1 ALIGNMENT 213 YS2-15j22.p1k chr13 251 31 380977 381197 C 221 100.00 269 accept_chi 1 ALIGNMENT 801 YS2-15j22.q1k chr13 1045 23 694884 695884 C 1023 94.62 1270 accept_chi 0 ALIGNMENT 947 YS2-15j23.p1k chr15 38 1064 106293 107317 F 1027 98.83 1073 accept 0 ALIGNMENT 39 YS2-15j24.q1k vc_3 378 340 2472 2510 C 39 100.00 378 reject_low 3 ALIGNMENT 0 YS2-15j24.q1k vc_5 339 62 37 36 C 278 0.00 378 reject_low 7 ALIGNMENT 39 YS2-15j24.q1k vc_1 378 340 2472 2510 C 39 100.00 378 reject_low 2 ALIGNMENT 0 YS2-15j24.q1k vc_7 62 340 13525 13524 F 279 0.00 378 reject_low 6 ALIGNMENT 278 YS2-15j24.p1k chr04 338 37 475409 475711 C 302 98.68 357 accept_chi 0 ALIGNMENT 0 YS2-15j24.q1k vc_1 339 62 2511 2510 C 278 0.00 378 reject_low 2 ALIGNMENT 0 YS2-15j24.q1k vc_4 62 339 5833 5832 F 278 0.00 378 reject_low 4 ALIGNMENT 39 YS2-15j24.q1k vc_5 378 340 5025 5063 C 39 100.00 378 reject_low 5 ALIGNMENT 0 YS2-15j24.q1k chr04 340 378 475715 475714 F 39 0.00 378 accept_chi 1 ALIGNMENT 38 YS2-15j24.q1k vc_7 341 378 13525 13562 F 38 100.00 378 reject_low 6 ALIGNMENT 36 YS2-15j24.q1k vc_5 375 340 1 36 C 36 100.00 378 reject_low 7 ALIGNMENT 0 YS2-15j24.q1k vc_3 339 62 2511 2510 C 278 0.00 378 reject_low 3 ALIGNMENT 39 YS2-15j24.q1k vc_4 340 378 5833 5871 F 39 100.00 378 reject_low 4 ALIGNMENT 274 YS2-15j24.q1k chr04 39 339 475414 475715 F 301 98.34 378 accept_chi 1 ALIGNMENT 0 YS2-15j24.p1k chr04 357 339 475410 475409 C 19 0.00 357 accept_chi 0 ALIGNMENT 0 YS2-15j24.q1k vc_5 339 62 5064 5063 C 278 0.00 378 reject_low 5 ALIGNMENT 957 YS2-15k01.q1k chr13 23 1111 299927 301009 F 1089 98.07 1184 accept_chi 0 ALIGNMENT 938 YS2-15k01.p1k chr13 1124 33 299923 301009 C 1092 96.70 1209 accept_chi 1 ALIGNMENT 51 YS2-15k02.p1k chr05 1049 1103 4163 4218 F 55 98.18 1199 reject_low 20 ALIGNMENT 48 YS2-15k02.q1k chr12 980 1034 1074128 1074183 F 55 96.36 1179|4,0 reject_low 9 ALIGNMENT 962 YS2-15k02.p1k chr04 1052 30 1528444 1529469 C 1023 98.14 1199 reject_low 8 ALIGNMENT 1041 YS2-15k02.p1k chr12 30 1199 2810 3980 F 1170 96.67 1199 ambiguous_tel 0 ALIGNMENT 0 YS2-15k02.q1k chr04 984 983 1527900 1527930 F 0 0.00 1179 reject_low 8 ALIGNMENT 0 YS2-15k02.q1k chr05 857 857 4442 4964 C 1 0.00 1179 reject_low 18 ALIGNMENT 0 YS2-15k02.q1k chr12 984 983 1074101 1074131 F 0 0.00 1179 reject_low 9 ALIGNMENT 696 YS2-15k02.q1k chr05 40 856 571131 571930 F 817 96.33 1179 reject_low 12 ALIGNMENT 26 YS2-15k02.q1k chr16 986 957 4069 4098 C 30 96.67 1179|3,0 reject_low 14 ALIGNMENT 0 YS2-15k02.p1k chr05 62 1048 4163 4162 F 987 0.00 1199 reject_low 20 ALIGNMENT 1030 YS2-15k02.q1k chr16 40 1174 943349 944491 F 1135 97.44 1179 ambiguous_tel 2 ALIGNMENT 48 YS2-15k02.q1k chr09 1031 980 4471 4523 C 52 98.08 1179|0,4 reject_low 15 ALIGNMENT 0 YS2-15k02.q1k chr07 915 956 1086667 1086778 F 42 0.00 1179 reject_low 11 ALIGNMENT 784 YS2-15k02.q1k chr12 40 856 1072486 1073302 F 817 99.14 1179 reject_low 9 ALIGNMENT 778 YS2-15k02.q1k chr16 856 40 4870 5686 C 817 98.90 1179 reject_low 14 ALIGNMENT 947 YS2-15k02.p1k chr10 30 1052 2964 3989 F 1023 97.65 1199 reject_low 17 ALIGNMENT 0 YS2-15k02.p1k chr15 1048 62 1087148 1087147 C 987 0.00 1199 reject_low 23 ALIGNMENT 0 YS2-15k02.q1k chr14 857 857 4359 4960 C 1 0.00 1179 reject_low 16 ALIGNMENT 950 YS2-15k02.p1k chr09 30 1052 2981 4006 F 1023 97.75 1199 reject_low 15 ALIGNMENT 1038 YS2-15k02.p1k chr06 30 1199 1847 3017 F 1170 96.58 1199 ambiguous_tel 4 ALIGNMENT 775 YS2-15k02.q1k chr09 856 40 5350 6166 C 817 98.78 1179 reject_low 15 ALIGNMENT 956 YS2-15k02.p1k chr12 1052 30 1067982 1069007 C 1023 97.95 1199 reject_low 13 ALIGNMENT 49 YS2-15k02.q1k chr16 914 858 4211 4267 C 57 94.74 1179 reject_low 14 ALIGNMENT 784 YS2-15k02.q1k chr04 40 856 1526285 1527101 F 817 99.14 1179 reject_low 8 ALIGNMENT 0 YS2-15k02.q1k chr16 956 915 4099 4210 C 42 0.00 1179 reject_low 14 ALIGNMENT 959 YS2-15k02.p1k chr07 1052 30 1087350 1088375 C 1023 98.04 1199 reject_low 11 ALIGNMENT 1041 YS2-15k02.p1k chr12 30 1199 8345 9515 F 1170 96.67 1199 ambiguous_tel 1 ALIGNMENT 48 YS2-15k02.q1k chr14 1034 980 4080 4135 C 55 96.36 1179|2,4 reject_low 16 ALIGNMENT 0 YS2-15k02.q1k chr14 1032 1033 3617 4081 C 0 0.00 1179 reject_low 16 ALIGNMENT 26 YS2-15k02.q1k chr15 957 986 1087038 1087067 F 30 96.67 1179|0,3 reject_low 10 ALIGNMENT 962 YS2-15k02.p1k chr15 1052 30 1087609 1088634 C 1023 98.14 1199 reject_low 10 ALIGNMENT 1032 YS2-15k02.p1k chr08 1199 30 558650 559820 C 1170 96.41 1199 ambiguous_tel 7 ALIGNMENT 0 YS2-15k02.q1k chr15 857 857 1086267 1086868 F 1 0.00 1179 reject_low 10 ALIGNMENT 49 YS2-15k02.q1k chr09 914 858 4690 4746 C 57 94.74 1179 reject_low 15 ALIGNMENT 0 YS2-15k02.q1k chr05 956 915 4273 4384 C 42 0.00 1179 reject_low 18 ALIGNMENT 26 YS2-15k02.q1k chr10 986 957 4531 4560 C 30 96.67 1179|3,0 reject_low 17 ALIGNMENT 962 YS2-15k02.p1k chr12 1052 30 1074645 1075670 C 1023 98.14 1199 reject_low 9 ALIGNMENT 48 YS2-15k02.q1k chr16 1034 980 3989 4044 C 55 96.36 1179|0,4 reject_low 14 ALIGNMENT 0 YS2-15k02.q1k chr05 857 857 571931 572532 F 1 0.00 1179 reject_low 12 ALIGNMENT 26 YS2-15k02.q1k chr14 986 957 4160 4189 C 30 96.67 1179|3,0 reject_low 16 ALIGNMENT 48 YS2-15k02.q1k chr07 980 1034 1086833 1086888 F 55 96.36 1179|4,0 reject_low 11 ALIGNMENT 0 YS2-15k02.q1k chr09 857 857 4747 5349 C 1 0.00 1179 reject_low 15 ALIGNMENT 48 YS2-15k02.q1k chr05 980 1034 572756 572811 F 55 96.36 1179|4,0 reject_low 12 ALIGNMENT 1017 YS2-15k02.q1k chr08 40 1174 557804 558944 F 1135 97.09 1179 ambiguous_tel 7 ALIGNMENT 0 YS2-15k02.q1k chr10 857 857 4730 5332 C 1 0.00 1179 reject_low 17 ALIGNMENT 26 YS2-15k02.q1k chr09 986 957 4548 4577 C 30 96.67 1179|3,0 reject_low 15 ALIGNMENT 48 YS2-15k02.p1k chr12 1103 1049 1074128 1074183 C 55 96.36 1199 reject_low 24 ALIGNMENT 26 YS2-15k02.q1k chr05 957 986 572702 572731 F 30 96.67 1179|0,3 reject_low 12 ALIGNMENT 778 YS2-15k02.q1k chr14 856 40 4961 5777 C 817 98.90 1179 reject_low 16 ALIGNMENT 0 YS2-15k02.q1k chr12 915 956 1067299 1067410 F 42 0.00 1179 reject_low 13,24,25 ALIGNMENT 51 YS2-15k02.q1k chr12 980 1034 1067465 1067520 F 55 98.18 1179|4,2 reject_low 13,24,25 ALIGNMENT 953 YS2-15k02.p1k chr05 30 1052 2657 3682 F 1023 97.85 1199 reject_low 18 ALIGNMENT 0 YS2-15k02.q1k chr15 984 983 1087065 1087095 F 0 0.00 1179 reject_low 10 ALIGNMENT 1038 YS2-15k02.p1k chr16 1199 30 944197 945367 C 1170 96.58 1199 ambiguous_tel 2 ALIGNMENT 49 YS2-15k02.q1k chr05 914 858 4385 4441 C 57 94.74 1179 reject_low 18 ALIGNMENT 49 YS2-15k02.q1k chr14 914 858 4302 4358 C 57 94.74 1179 reject_low 16 ALIGNMENT 26 YS2-15k02.q1k chr12 957 986 1067411 1067440 F 30 96.67 1179|0,3 reject_low 13,19,24,25 ALIGNMENT 84 YS2-15k02.q1k chr10 1174 1031 3840 3989 C 144 87.50 1179|0,1 reject_low 17 ALIGNMENT 0 YS2-15k02.q1k chr12 984 983 1067438 1067468 F 0 0.00 1179 reject_low 13,24,25 ALIGNMENT 0 YS2-15k02.p1k chr12 1048 62 1067521 1067520 C 987 0.00 1199 reject_low 19 ALIGNMENT 0 YS2-15k02.p1k chr07 1048 62 1086889 1086888 C 987 0.00 1199 reject_low 22 ALIGNMENT 49 YS2-15k02.q1k chr10 914 858 4673 4729 C 57 94.74 1179 reject_low 17 ALIGNMENT 959 YS2-15k02.p1k chr05 1052 30 573273 574298 C 1023 98.04 1199 reject_low 12 ALIGNMENT 0 YS2-15k02.q1k chr05 984 983 572729 572759 F 0 0.00 1179 reject_low 12 ALIGNMENT 775 YS2-15k02.q1k chr10 856 40 5333 6149 C 817 98.78 1179 reject_low 17 ALIGNMENT 0 YS2-15k02.q1k chr04 915 956 1527761 1527872 F 42 0.00 1179 reject_low 8 ALIGNMENT 49 YS2-15k02.q1k chr12 858 914 1067242 1067298 F 57 94.74 1179 reject_low 13,24,25 ALIGNMENT 0 YS2-15k02.q1k chr12 62 857 1067242 1067241 F 796 0.00 1179 reject_low 24,25 ALIGNMENT 49 YS2-15k02.q1k chr15 858 914 1086869 1086925 F 57 94.74 1179 reject_low 10 ALIGNMENT 1034 YS2-15k02.q1k chr12 1174 40 9221 10362 C 1135 97.53 1179 ambiguous_tel 1 ALIGNMENT 1038 YS2-15k02.p1k chr13 30 1199 2686 3856 F 1170 96.58 1199 ambiguous_tel 3 ALIGNMENT 48 YS2-15k02.p1k chr15 1103 1049 1087092 1087147 C 55 96.36 1199 reject_low 23 ALIGNMENT 51 YS2-15k02.q1k chr05 1034 980 4163 4218 C 55 98.18 1179|0,4 reject_low 18 ALIGNMENT 48 YS2-15k02.p1k chr05 1103 1049 572756 572811 C 55 96.36 1199 reject_low 21 ALIGNMENT 0 YS2-15k02.q1k chr10 983 984 4503 4533 C 0 0.00 1179 reject_low 17 ALIGNMENT 26 YS2-15k02.q1k chr04 957 986 1527873 1527902 F 30 96.67 1179|0,3 reject_low 8 ALIGNMENT 1028 YS2-15k02.q1k chr13 1174 40 3562 4703 C 1135 97.36 1179 ambiguous_tel 3 ALIGNMENT 48 YS2-15k02.q1k chr10 1031 980 4454 4506 C 52 98.08 1179|0,4 reject_low 17 ALIGNMENT 0 YS2-15k02.q1k chr05 915 956 572590 572701 F 42 0.00 1179 reject_low 12 ALIGNMENT 84 YS2-15k02.q1k chr12 1031 1174 1074645 1074794 F 144 87.50 1179|2,0 reject_low 25 ALIGNMENT 1032 YS2-15k02.p1k chr08 30 1199 2542 3712 F 1170 96.41 1199 ambiguous_tel 5 ALIGNMENT 778 YS2-15k02.q1k chr07 40 856 1085191 1086007 F 817 98.90 1179 reject_low 11 ALIGNMENT 0 YS2-15k02.p1k chr05 1048 62 572812 572811 C 987 0.00 1199 reject_low 21 ALIGNMENT 26 YS2-15k02.q1k chr12 957 986 1074074 1074103 F 30 96.67 1179|0,3 reject_low 9 ALIGNMENT 0 YS2-15k02.q1k chr09 983 984 4520 4550 C 0 0.00 1179 reject_low 15 ALIGNMENT 0 YS2-15k02.q1k chr14 983 984 4132 4162 C 0 0.00 1179 reject_low 16 ALIGNMENT 0 YS2-15k02.q1k chr05 983 984 4215 4245 C 0 0.00 1179 reject_low 18 ALIGNMENT 0 YS2-15k02.q1k chr12 857 857 1073303 1073904 F 1 0.00 1179 reject_low 9 ALIGNMENT 0 YS2-15k02.q1k chr12 1033 1032 1067519 1067983 F 0 0.00 1179 reject_low 24 ALIGNMENT 48 YS2-15k02.p1k chr07 1103 1049 1086833 1086888 C 55 96.36 1199 reject_low 22 ALIGNMENT 568 YS2-15k02.q1k chr05 856 40 4965 5732 C 817 92.53 1179 reject_low 18 ALIGNMENT 0 YS2-15k02.q1k chr07 857 857 1086008 1086609 F 1 0.00 1179 reject_low 11 ALIGNMENT 49 YS2-15k02.q1k chr07 858 914 1086610 1086666 F 57 94.74 1179 reject_low 11 ALIGNMENT 49 YS2-15k02.q1k chr12 858 914 1073905 1073961 F 57 94.74 1179 reject_low 9 ALIGNMENT 0 YS2-15k02.q1k chr12 857 857 1066719 1067241 F 1 0.00 1179 reject_low 13 ALIGNMENT 26 YS2-15k02.q1k chr07 957 986 1086779 1086808 F 30 96.67 1179|0,3 reject_low 11 ALIGNMENT 48 YS2-15k02.q1k chr15 980 1034 1087092 1087147 F 55 96.36 1179|4,0 reject_low 10 ALIGNMENT 81 YS2-15k02.q1k chr12 1031 1174 1067982 1068131 F 144 86.81 1179|2,0 reject_low 24 ALIGNMENT 0 YS2-15k02.q1k chr07 984 983 1086806 1086836 F 0 0.00 1179 reject_low 11 ALIGNMENT 51 YS2-15k02.p1k chr12 1103 1049 1067465 1067520 C 55 98.18 1199 reject_low 19 ALIGNMENT 0 YS2-15k02.q1k chr10 956 915 4561 4672 C 42 0.00 1179 reject_low 17 ALIGNMENT 0 YS2-15k02.q1k chr04 857 857 1527102 1527703 F 1 0.00 1179 reject_low 8 ALIGNMENT 49 YS2-15k02.q1k chr05 858 914 572533 572589 F 57 94.74 1179 reject_low 12 ALIGNMENT 0 YS2-15k02.q1k chr09 956 915 4578 4689 C 42 0.00 1179 reject_low 15 ALIGNMENT 959 YS2-15k02.p1k chr16 30 1052 2502 3527 F 1023 98.04 1199 reject_low 14 ALIGNMENT 49 YS2-15k02.q1k chr04 858 914 1527704 1527760 F 57 94.74 1179 reject_low 8 ALIGNMENT 0 YS2-15k02.p1k chr12 1048 62 1074184 1074183 C 987 0.00 1199 reject_low 24 ALIGNMENT 0 YS2-15k02.q1k chr12 915 956 1073962 1074073 F 42 0.00 1179 reject_low 9 ALIGNMENT 0 YS2-15k02.q1k chr12 62 956 1067411 1067410 F 895 0.00 1179 reject_low 19 ALIGNMENT 0 YS2-15k02.q1k chr16 857 857 4268 4869 C 1 0.00 1179 reject_low 14 ALIGNMENT 1034 YS2-15k02.q1k chr08 1174 40 3418 4559 C 1135 97.53 1179 ambiguous_tel 5 ALIGNMENT 0 YS2-15k02.q1k chr16 983 984 4041 4071 C 0 0.00 1179 reject_low 14 ALIGNMENT 0 YS2-15k02.q1k chr14 956 915 4190 4301 C 42 0.00 1179 reject_low 16 ALIGNMENT 959 YS2-15k02.p1k chr14 30 1052 2593 3618 F 1023 98.04 1199 reject_low 16 ALIGNMENT 784 YS2-15k02.q1k chr15 40 856 1085450 1086266 F 817 99.14 1179 reject_low 10 ALIGNMENT 641 YS2-15k02.q1k chr12 40 856 1065934 1066718 F 817 94.74 1179 reject_low 13 ALIGNMENT 81 YS2-15k02.q1k chr14 1174 1031 3469 3618 C 144 86.81 1179|0,2 reject_low 16 ALIGNMENT 1034 YS2-15k02.q1k chr12 1174 40 3686 4827 C 1135 97.53 1179 ambiguous_tel 0 ALIGNMENT 0 YS2-15k02.q1k chr15 915 956 1086926 1087037 F 42 0.00 1179 reject_low 10 ALIGNMENT 0 YS2-15k02.q1k chr10 1031 1032 3989 4453 C 0 0.00 1179 reject_low 17 ALIGNMENT 1032 YS2-15k02.p1k chr02 30 1199 3011 4181 F 1170 96.41 1199 ambiguous_tel 6 ALIGNMENT 26 YS2-15k02.q1k chr05 986 957 4243 4272 C 30 96.67 1179|3,0 reject_low 18 ALIGNMENT 48 YS2-15k02.q1k chr04 980 1034 1527927 1527982 F 55 96.36 1179|4,0 reject_low 8 ALIGNMENT 0 YS2-15k02.q1k chr12 1033 1032 1067519 1074646 F 0 0.00 1179 reject_low 25 ALIGNMENT 1022 YS2-15k02.q1k chr02 1174 40 3887 5028 C 1135 97.18 1179 ambiguous_tel 6 ALIGNMENT 1027 YS2-15k02.q1k chr06 1174 40 2723 3865 C 1135 97.36 1179 ambiguous_tel 4 ALIGNMENT 0 YS2-15k03.p1k scplasm1 286 304 5891 5890 F 19 0.00 304 accept_chi 0 ALIGNMENT 244 YS2-15k03.p1k vc_6 33 285 5332 5584 F 253 100.00 304 reject_vc 1 ALIGNMENT 0 YS2-15k03.q1k vc_6 330 290 5333 5332 C 41 0.00 330 reject_vc 3 ALIGNMENT 0 YS2-15k03.q1k vc_5 291 62 37 36 C 230 0.00 330 reject_low 10 ALIGNMENT 0 YS2-15k03.q1k vc_1 288 62 2514 2513 C 227 0.00 330 reject_low 4 ALIGNMENT 0 YS2-15k03.q1k vc_7 62 292 13525 13524 F 231 0.00 330 reject_low 9 ALIGNMENT 0 YS2-15k03.q1k vc_4 62 288 5830 5829 F 227 0.00 330 reject_low 7 ALIGNMENT 0 YS2-15k03.q1k scplasm1 330 290 5640 5639 C 41 0.00 330 accept_chi 2 ALIGNMENT 42 YS2-15k03.q1k vc_1 330 289 2472 2513 C 42 100.00 330 reject_low 4 ALIGNMENT 42 YS2-15k03.q1k vc_4 289 330 5830 5871 F 42 100.00 330 reject_low 7 ALIGNMENT 42 YS2-15k03.q1k vc_2 330 289 2105 2146 C 42 100.00 330 reject_low 5 ALIGNMENT 0 YS2-15k03.p1k vc_6 286 304 5584 5583 F 19 0.00 304 reject_vc 1 ALIGNMENT 0 YS2-15k03.q1k vc_3 288 62 2514 2513 C 227 0.00 330 reject_low 6 ALIGNMENT 0 YS2-15k03.q1k vc_2 288 62 2147 2146 C 227 0.00 330 reject_low 5 ALIGNMENT 244 YS2-15k03.q1k vc_6 289 37 5332 5584 C 253 100.00 330 reject_vc 3 ALIGNMENT 244 YS2-15k03.q1k scplasm1 289 37 5639 5891 C 253 100.00 330 accept_chi 2 ALIGNMENT 38 YS2-15k03.q1k vc_7 293 330 13525 13562 F 38 100.00 330 reject_low 9 ALIGNMENT 36 YS2-15k03.q1k vc_5 327 292 1 36 C 36 100.00 330 reject_low 10 ALIGNMENT 42 YS2-15k03.q1k vc_3 330 289 2472 2513 C 42 100.00 330 reject_low 6 ALIGNMENT 39 YS2-15k03.q1k vc_5 330 292 5025 5063 C 39 100.00 330 reject_low 8 ALIGNMENT 244 YS2-15k03.p1k scplasm1 33 285 5639 5891 F 253 100.00 304 accept_chi 0 ALIGNMENT 0 YS2-15k03.q1k vc_5 291 62 5064 5063 C 230 0.00 330 reject_low 8 ALIGNMENT 1003 YS2-15k04.p1k chr11 1227 43 467701 468889 C 1185 96.03 1228 accept 0 ALIGNMENT 965 YS2-15k04.q1k chr11 57 1205 464828 465992 F 1149 96.00 1272 accept 0 ALIGNMENT 1027 YS2-15k05.p1k chr11 31 1245 514269 515500 F 1215 95.39 1256 accept 0 ALIGNMENT 0 YS2-15k05.q1k chr07 518 62 881308 881307 C 457 0.00 1298 reject_low 1 ALIGNMENT 939 YS2-15k05.q1k chr11 1142 34 514938 516075 C 1109 96.30 1298 accept 0 ALIGNMENT 0 YS2-15k05.q1k chr07 888 670 881158 881157 C 219 0.00 1298 reject_low 1 ALIGNMENT 34 YS2-15k05.q1k chr07 669 519 881157 881307 C 151 74.83 1298 reject_low 1 ALIGNMENT 995 YS2-15k06.q1k chr11 41 1187 474207 475369 F 1147 96.25 1340 accept 0 ALIGNMENT 1069 YS2-15k06.p1k chr11 1266 31 479131 480360 C 1236 96.44 1275 accept 0 ALIGNMENT 819 YS2-15k07.q1k chr12 40 1080 549028 550061 F 1041 94.14 1325 accept 0 ALIGNMENT 1031 YS2-15k07.p1k chr12 1229 31 552287 553491 C 1199 95.25 1300 accept 0 ALIGNMENT 178 YS2-15k08.p1k chr04 32 232 1278452 1278651 F 201 98.51 251 accept 0 ALIGNMENT 0 YS2-15k08.p1k chr04 233 251 1278651 1278650 F 19 0.00 251 accept 0 ALIGNMENT 0 YS2-15k09.q1k vc_7 304 304 4700 4921 C 1 0.00 660 reject_vc 8 ALIGNMENT 457 YS2-15k09.q1k vc_7 627 1 1939 2569 C 627 91.55 660 reject_vc 2 ALIGNMENT 243 YS2-15k09.q1k vc_7 303 53 4922 5172 C 251 98.80 660|0,1 reject_vc 8 ALIGNMENT 379 YS2-15k09.p1k chr12 35 438 869642 870045 F 404 99.75 457 accept 0 ALIGNMENT 0 YS2-15k09.q1k vc_4 237 62 113 112 C 176 0.00 660 reject_low 9 ALIGNMENT 51 YS2-15k09.q1k vc_7 54 3 6360 6411 C 52 100.00 660|1,0 reject_vc 8 ALIGNMENT 0 YS2-15k09.q1k vc_4 62 237 1548 1547 F 176 0.00 660 reject_vc 7 ALIGNMENT 457 YS2-15k09.q1k vc_5 1 627 2556 3186 F 627 91.71 660 reject_vc 1 ALIGNMENT 0 YS2-15k09.q1k vc_4 237 62 6340 6339 C 176 0.00 660 reject_low 10 ALIGNMENT 298 YS2-15k09.q1k vc_3 1 303 2689 2991 F 303 99.34 660 reject_vc 6 ALIGNMENT 153 YS2-15k09.q1k vc_4 308 627 1879 2202 F 320 84.38 660 reject_vc 7 ALIGNMENT 298 YS2-15k09.q1k vc_2 1 303 2322 2624 F 303 99.34 660 reject_vc 5 ALIGNMENT 380 YS2-15k09.q1k vc_4 422 1 5233 5654 C 422 97.16 660 reject_vc 3 ALIGNMENT 0 YS2-15k09.q1k vc_4 305 307 1615 1878 F 3 0.00 660 reject_vc 7 ALIGNMENT 65 YS2-15k09.q1k vc_4 238 304 1548 1614 F 67 100.00 660 reject_vc 7 ALIGNMENT 65 YS2-15k09.q1k vc_4 304 238 6273 6339 C 67 100.00 660 reject_low 10 ALIGNMENT 0 YS2-15k09.p1k chr12 439 457 870045 870044 F 19 0.00 457 accept 0 ALIGNMENT 0 YS2-15k09.q1k vc_7 53 54 5172 6360 C 0 0.00 660 reject_vc 8 ALIGNMENT 298 YS2-15k09.q1k vc_1 1 303 2689 2991 F 303 99.34 660 reject_vc 4 ALIGNMENT 87 YS2-15k09.q1k vc_7 422 305 4584 4699 C 118 93.22 660 reject_vc 8 ALIGNMENT 65 YS2-15k09.q1k vc_4 304 238 46 112 C 67 100.00 660 reject_low 9 ALIGNMENT 0 YS2-15k10.q1k vc_4 62 164 5831 5830 F 103 0.00 205 reject_low 4 ALIGNMENT 0 YS2-15k10.q1k vc_7 62 167 13525 13524 F 106 0.00 205 reject_low 6 ALIGNMENT 0 YS2-15k10.q1k chr04 205 166 592229 592228 C 40 0.00 205 accept 0 ALIGNMENT 0 YS2-15k10.q1k vc_5 166 62 5064 5063 C 105 0.00 205 reject_low 5 ALIGNMENT 36 YS2-15k10.q1k vc_5 202 167 1 36 C 36 100.00 205 reject_low 7 ALIGNMENT 0 YS2-15k10.q1k vc_1 164 62 2513 2512 C 103 0.00 205 reject_low 1 ALIGNMENT 127 YS2-15k10.q1k chr04 165 37 592228 592356 C 129 100.00 205 accept 0 ALIGNMENT 41 YS2-15k10.q1k vc_1 205 165 2472 2512 C 41 100.00 205 reject_low 1 ALIGNMENT 0 YS2-15k10.q1k vc_5 166 62 37 36 C 105 0.00 205 reject_low 7 ALIGNMENT 0 YS2-15k10.q1k vc_2 164 62 2146 2145 C 103 0.00 205 reject_low 2 ALIGNMENT 41 YS2-15k10.q1k vc_4 165 205 5831 5871 F 41 100.00 205 reject_low 4 ALIGNMENT 41 YS2-15k10.q1k vc_3 205 165 2472 2512 C 41 100.00 205 reject_low 3 ALIGNMENT 39 YS2-15k10.q1k vc_5 205 167 5025 5063 C 39 100.00 205 reject_low 5 ALIGNMENT 38 YS2-15k10.q1k vc_7 168 205 13525 13562 F 38 100.00 205 reject_low 6 ALIGNMENT 0 YS2-15k10.q1k vc_3 164 62 2513 2512 C 103 0.00 205 reject_low 3 ALIGNMENT 41 YS2-15k10.q1k vc_2 205 165 2105 2145 C 41 100.00 205 reject_low 2 ALIGNMENT 940 YS2-15k11.p1k chr04 1161 30 1398348 1399488 C 1132 95.67 1232 accept 0 ALIGNMENT 942 YS2-15k11.q1k chr04 37 1220 1397761 1398955 F 1184 94.09 1363 accept 0 ALIGNMENT 855 YS2-15k12.q1k chr14 1046 38 402791 403807 C 1009 96.23 1298 accept 0 ALIGNMENT 928 YS2-15k12.p1k chr14 31 1113 398912 400001 F 1083 96.31 1243 accept 0 ALIGNMENT 0 YS2-15k14.q1k vc_3 282 62 2516 2515 C 221 0.00 326 reject_low 4 ALIGNMENT 39 YS2-15k14.q1k vc_5 326 288 5025 5063 C 39 100.00 326 reject_low 6 ALIGNMENT 238 YS2-15k14.q1k chr04 286 35 610865 611116 C 252 98.81 326 accept_chi 0 ALIGNMENT 0 YS2-15k14.q1k vc_5 287 62 5064 5063 C 226 0.00 326 reject_low 6 ALIGNMENT 43 YS2-15k14.q1k vc_2 326 283 2105 2148 C 44 100.00 326 reject_low 3 ALIGNMENT 0 YS2-15k14.q1k vc_1 282 62 2516 2515 C 221 0.00 326 reject_low 2 ALIGNMENT 0 YS2-15k14.q1k vc_7 62 288 13525 13524 F 227 0.00 326 reject_low 7 ALIGNMENT 0 YS2-15k14.q1k vc_2 282 62 2149 2148 C 221 0.00 326 reject_low 3 ALIGNMENT 0 YS2-15k14.q1k vc_5 287 62 37 36 C 226 0.00 326 reject_low 8 ALIGNMENT 0 YS2-15k14.p1k chr04 278 295 611116 611115 F 18 0.00 295 accept_chi 1 ALIGNMENT 36 YS2-15k14.q1k vc_5 323 288 1 36 C 36 100.00 326 reject_low 8 ALIGNMENT 43 YS2-15k14.q1k vc_1 326 283 2472 2515 C 44 100.00 326 reject_low 2 ALIGNMENT 0 YS2-15k14.q1k vc_4 62 282 5828 5827 F 221 0.00 326 reject_low 5 ALIGNMENT 43 YS2-15k14.q1k vc_3 326 283 2472 2515 C 44 100.00 326 reject_low 4 ALIGNMENT 43 YS2-15k14.q1k vc_4 283 326 5828 5871 F 44 100.00 326 reject_low 5 ALIGNMENT 0 YS2-15k14.q1k chr04 326 287 610866 610865 C 40 0.00 326 accept_chi 0 ALIGNMENT 38 YS2-15k14.q1k vc_7 289 326 13525 13562 F 38 100.00 326 reject_low 7 ALIGNMENT 233 YS2-15k14.p1k chr04 27 277 610865 611116 F 251 98.41 295 accept_chi 1 ALIGNMENT 978 YS2-15k15.p1k chr08 31 1217 295986 297179 F 1187 94.78 1272 accept 0 ALIGNMENT 939 YS2-15k15.q1k chr08 1114 38 299015 300093 C 1077 96.38 1116 accept 0 ALIGNMENT 948 YS2-15k16.q1k chr06 1107 43 79751 80824 C 1065 97.18 1120 accept 0 ALIGNMENT 898 YS2-15k16.p1k chr06 40 1100 75495 76566 F 1061 95.29 1254 accept 0 ALIGNMENT 0 YS2-15k18.q1k vc_4 62 583 5832 5831 F 522 0.00 623 reject_low 5 ALIGNMENT 40 YS2-15k18.q1k vc_3 623 584 2472 2511 C 40 100.00 623 reject_low 4 ALIGNMENT 0 YS2-15k18.q1k vc_5 584 62 37 36 C 523 0.00 623 reject_low 8 ALIGNMENT 0 YS2-15k18.p1k chr13 595 577 646932 646931 C 19 0.00 595 accept_chi 1 ALIGNMENT 40 YS2-15k18.q1k vc_2 623 584 2105 2144 C 40 100.00 623 reject_low 3 ALIGNMENT 521 YS2-15k18.p1k chr13 576 29 646931 647479 C 548 99.64 595 accept_chi 1 ALIGNMENT 0 YS2-15k18.q1k vc_2 583 62 2145 2144 C 522 0.00 623 reject_low 3 ALIGNMENT 0 YS2-15k18.q1k chr13 584 623 647479 647478 F 40 0.00 623 accept_chi 0 ALIGNMENT 0 YS2-15k18.q1k vc_7 62 585 13525 13524 F 524 0.00 623 reject_low 7 ALIGNMENT 526 YS2-15k18.q1k chr13 35 583 646931 647479 F 549 99.82 623 accept_chi 0 ALIGNMENT 40 YS2-15k18.q1k vc_1 623 584 2472 2511 C 40 100.00 623 reject_low 2 ALIGNMENT 39 YS2-15k18.q1k vc_5 623 585 5025 5063 C 39 100.00 623 reject_low 6 ALIGNMENT 0 YS2-15k18.q1k vc_1 583 62 2512 2511 C 522 0.00 623 reject_low 2 ALIGNMENT 0 YS2-15k18.q1k vc_3 583 62 2512 2511 C 522 0.00 623 reject_low 4 ALIGNMENT 40 YS2-15k18.q1k vc_4 584 623 5832 5871 F 40 100.00 623 reject_low 5 ALIGNMENT 38 YS2-15k18.q1k vc_7 586 623 13525 13562 F 38 100.00 623 reject_low 7 ALIGNMENT 0 YS2-15k18.q1k vc_5 584 62 5064 5063 C 523 0.00 623 reject_low 6 ALIGNMENT 36 YS2-15k18.q1k vc_5 620 585 1 36 C 36 100.00 623 reject_low 8 ALIGNMENT 53 YS2-15k19.q1k chr16 656 733 194001 194078 F 78 89.74 1249 reject_low 2 ALIGNMENT 0 YS2-15k19.q1k chr07 691 62 344902 344901 C 630 0.00 1249 reject_low 7 ALIGNMENT 57 YS2-15k19.q1k chr16 629 733 193911 194015 F 105 84.76 1249 reject_low 1 ALIGNMENT 0 YS2-15k19.q1k chr16 62 685 193905 193904 F 624 0.00 1249 reject_low 5 ALIGNMENT 48 YS2-15k19.q1k chr16 656 734 194064 194142 F 79 87.34 1249 reject_low 3 ALIGNMENT 0 YS2-15k19.q1k chr16 734 920 193952 193951 F 187 0.00 1249 reject_low 5 ALIGNMENT 997 YS2-15k19.q1k chr07 1149 39 344378 345491 C 1111 97.03 1249 accept 0 ALIGNMENT 0 YS2-15k19.q1k chr16 735 920 194142 194141 F 186 0.00 1249 reject_low 3 ALIGNMENT 0 YS2-15k19.q1k chr16 671 920 194141 194140 F 250 0.00 1249 reject_low 4 ALIGNMENT 0 YS2-15k19.q1k chr16 62 655 194001 194000 F 594 0.00 1249 reject_low 2 ALIGNMENT 0 YS2-15k19.q1k chr07 628 62 344839 344838 C 567 0.00 1249 reject_low 6 ALIGNMENT 0 YS2-15k19.q1k chr16 62 655 194064 194063 F 594 0.00 1249 reject_low 3 ALIGNMENT 957 YS2-15k19.p1k chr07 27 1181 341187 342350 F 1155 95.58 1203 accept 0 ALIGNMENT 0 YS2-15k19.q1k chr16 62 628 193911 193910 F 567 0.00 1249 reject_low 1 ALIGNMENT 21 YS2-15k19.q1k chr07 733 692 344860 344901 C 42 83.33 1249 reject_low 7 ALIGNMENT 21 YS2-15k19.q1k chr07 670 629 344797 344838 C 42 83.33 1249 reject_low 6 ALIGNMENT 0 YS2-15k19.q1k chr07 920 671 344798 344797 C 250 0.00 1249 reject_low 6 ALIGNMENT 0 YS2-15k19.q1k chr16 734 920 194015 194014 F 187 0.00 1249 reject_low 1 ALIGNMENT 24 YS2-15k19.q1k chr16 608 670 194079 194141 F 63 79.37 1249 reject_low 4 ALIGNMENT 33 YS2-15k19.q1k chr16 686 733 193905 193952 F 48 89.58 1249 reject_low 5 ALIGNMENT 0 YS2-15k19.q1k chr16 62 607 194079 194078 F 546 0.00 1249 reject_low 4 ALIGNMENT 0 YS2-15k19.q1k chr07 920 734 344861 344860 C 187 0.00 1249 reject_low 7 ALIGNMENT 0 YS2-15k19.q1k chr16 734 920 194078 194077 F 187 0.00 1249 reject_low 2 ALIGNMENT 47 YS2-15k22.q1k chrm 212 160 69433 69486 C 53 98.11 1224 reject_low 4 ALIGNMENT 0 YS2-15k22.p1k chrm 848 717 34926 34925 C 132 0.00 1203 reject_low 26 ALIGNMENT 0 YS2-15k22.p1k chrm 668 62 80541 80540 C 607 0.00 1203 reject_low 23 ALIGNMENT 0 YS2-15k22.q1k chrm 845 213 69434 69433 C 633 0.00 1224 reject_low 4 ALIGNMENT 0 YS2-15k22.q1k chrm 845 219 69039 69038 C 627 0.00 1224 reject_low 3 ALIGNMENT 43 YS2-15k22.p1k chrm 627 765 47437 47575 F 139 83.45 1203 reject_low 9,22 ALIGNMENT 0 YS2-15k22.p1k chrm 860 809 48001 48000 C 52 0.00 1203 reject_bad_break 0 ALIGNMENT 0 YS2-15k22.q1k chrm 845 203 81405 81404 C 643 0.00 1224 reject_low 18 ALIGNMENT 0 YS2-15k22.p1k chrm 668 62 34325 34324 C 607 0.00 1203 reject_low 21 ALIGNMENT 0 YS2-15k22.p1k chrm 668 62 53865 53864 C 607 0.00 1203 reject_low 1,13 ALIGNMENT 0 YS2-15k22.q1k chrm 845 212 53820 53819 C 634 0.00 1224 reject_low 9 ALIGNMENT 33 YS2-15k22.p1k chrm 705 669 53828 53864 C 37 100.00 1203 reject_low 1,13 ALIGNMENT 0 YS2-15k22.q1k chrm 62 832 81404 81403 F 771 0.00 1224 reject_low 10 ALIGNMENT 0 YS2-15k22.p1k chrm 848 707 10747 10746 C 142 0.00 1203 reject_low 24 ALIGNMENT 54 YS2-15k22.q1k chrm 235 160 11475 11548 C 76 92.11 1224 reject_low 11 ALIGNMENT 0 YS2-15k22.q1k chrm 738 833 53723 53827 F 96 0.00 1224 reject_low 2 ALIGNMENT 0 YS2-15k22.p1k chrm 671 62 10781 10780 C 610 0.00 1203 reject_low 24 ALIGNMENT 0 YS2-15k22.p1k chrm 848 712 52768 52767 C 137 0.00 1203 reject_low 16 ALIGNMENT 0 YS2-15k22.q1k chrm 161 62 69095 69094 C 100 0.00 1224 reject_low 3 ALIGNMENT 0 YS2-15k22.q1k chrm 687 845 48007 48006 F 159 0.00 1224 reject_bad_break 0 ALIGNMENT 61 YS2-15k22.q1k chrm 824 913 11038 11129 F 90 92.22 1224 reject_low 12 ALIGNMENT 25 YS2-15k22.p1k chrm 716 689 34925 34952 C 28 96.43 1203 reject_low 26 ALIGNMENT 0 YS2-15k22.p1k chrm 734 848 4607 4606 F 115 0.00 1203 reject_low 11,15,17 ALIGNMENT 57 YS2-15k22.p1k chrm 715 625 11038 11129 C 91 91.21 1203 reject_low 8 ALIGNMENT 0 YS2-15k22.q1k chrm 845 205 10745 10744 C 641 0.00 1224 reject_low 17 ALIGNMENT 60 YS2-15k22.q1k chrm 678 737 53663 53722 F 60 100.00 1224 reject_low 2 ALIGNMENT 0 YS2-15k22.q1k chrm 809 659 57094 57298 C 151 0.00 1224 reject_low 22 ALIGNMENT 567 YS2-15k22.p1k chrm 808 40 48001 48761 C 769 98.96 1203 reject_bad_break 0 ALIGNMENT 0 YS2-15k22.p1k chrm 613 62 52866 52865 C 552 0.00 1203 reject_low 16 ALIGNMENT 0 YS2-15k22.p1k chrm 683 62 11529 11528 C 622 0.00 1203 reject_low 12 ALIGNMENT 0 YS2-15k22.p1k chrm 848 715 80495 80494 C 134 0.00 1203 reject_low 23 ALIGNMENT 0 YS2-15k22.p1k chrm 848 738 76564 76563 C 111 0.00 1203 reject_low 19 ALIGNMENT 28 YS2-15k22.q1k chrm 769 926 69381 69542 F 158 79.75 1224 reject_low 6 ALIGNMENT 41 YS2-15k22.p1k chrm 669 713 71218 71262 F 45 97.78 1203 reject_low 5,18 ALIGNMENT 47 YS2-15k22.p1k chrm 737 669 76563 76632 C 69 91.30 1203 reject_low 19 ALIGNMENT 51 YS2-15k22.q1k chrm 218 162 69038 69094 C 57 96.49 1224 reject_low 3 ALIGNMENT 0 YS2-15k22.p1k chrm 848 732 34264 34263 C 117 0.00 1203 reject_low 21 ALIGNMENT 42 YS2-15k22.q1k chrm 211 160 53819 53869 C 52 96.15 1224 reject_low 9 ALIGNMENT 0 YS2-15k22.p1k chrm 62 668 71218 71217 F 607 0.00 1203 reject_low 5,18 ALIGNMENT 0 YS2-15k22.q1k chrm 62 801 69024 69023 F 740 0.00 1224 reject_low 7 ALIGNMENT 55 YS2-15k22.p1k chrm 864 747 82846 82962 C 118 85.59 1203 reject_low 6,7,10 ALIGNMENT 39 YS2-15k22.q1k chrm 679 638 81521 81562 C 42 100.00 1224 reject_low 5 ALIGNMENT 0 YS2-15k22.p1k chrm 668 62 83092 83091 C 607 0.00 1203 reject_low 6,7,10 ALIGNMENT 0 YS2-15k22.q1k chrm 62 665 53736 53735 F 604 0.00 1224 reject_low 13 ALIGNMENT 0 YS2-15k22.q1k chrm 62 823 11038 11037 F 762 0.00 1224 reject_low 12 ALIGNMENT 20 YS2-15k22.q1k chrm 666 687 53736 53757 F 22 100.00 1224 reject_low 13 ALIGNMENT 40 YS2-15k22.p1k chrm 712 669 83048 83091 C 44 97.73 1203 reject_low 6,7,10 ALIGNMENT 0 YS2-15k22.q1k chrm 62 811 10726 10725 F 750 0.00 1224 reject_low 8 ALIGNMENT 0 YS2-15k22.q1k chrm 845 211 11040 11039 C 635 0.00 1224 reject_low 15 ALIGNMENT 137 YS2-15k22.p1k chrm 1199 861 47671 48000 C 339 86.73 1203 reject_bad_break 0 ALIGNMENT 0 YS2-15k22.q1k chrm 62 768 69381 69380 F 707 0.00 1224 reject_low 6 ALIGNMENT 0 YS2-15k22.q1k chrm 633 62 57325 57324 C 572 0.00 1224 reject_low 22 ALIGNMENT 0 YS2-15k22.q1k chrm 159 62 69487 69486 C 98 0.00 1224 reject_low 4 ALIGNMENT 49 YS2-15k22.q1k chrm 261 123 48043 48180 C 139 84.17 1224 reject_low 25 ALIGNMENT 39 YS2-15k22.p1k chrm 711 614 52767 52865 C 98 83.67 1203 reject_low 16 ALIGNMENT 0 YS2-15k22.p1k chrm 730 880 57094 57297 F 151 0.00 1203 reject_low 3,4 ALIGNMENT 0 YS2-15k22.q1k chrm 122 62 48181 48180 C 61 0.00 1224 reject_low 25 ALIGNMENT 46 YS2-15k22.p1k chrm 731 669 34263 34324 C 63 93.65 1203 reject_low 21 ALIGNMENT 0 YS2-15k22.p1k chrm 766 848 47575 47574 F 83 0.00 1203 reject_low 9,22 ALIGNMENT 27 YS2-15k22.p1k chrm 713 684 11499 11528 C 30 96.67 1203 reject_low 12 ALIGNMENT 0 YS2-15k22.q1k chrm 62 825 11499 11498 F 764 0.00 1224 reject_low 20 ALIGNMENT 40 YS2-15k22.q1k chrm 204 159 10744 10789 C 46 97.83 1224 reject_low 17 ALIGNMENT 0 YS2-15k22.q1k chrm 158 62 10790 10789 C 97 0.00 1224 reject_low 17 ALIGNMENT 0 YS2-15k22.p1k chrm 668 62 76633 76632 C 607 0.00 1203 reject_low 19 ALIGNMENT 0 YS2-15k22.p1k chrm 848 706 53829 53828 C 143 0.00 1203 reject_low 13 ALIGNMENT 37 YS2-15k22.q1k chrm 833 874 81404 81445 F 42 100.00 1224 reject_low 10 ALIGNMENT 0 YS2-15k22.p1k chrm 848 716 11039 11038 C 133 0.00 1203 reject_low 8 ALIGNMENT 0 YS2-15k22.q1k chrm 637 62 81563 81562 C 576 0.00 1224 reject_low 5 ALIGNMENT 31 YS2-15k22.p1k chrm 672 733 4544 4607 F 62 85.48 1203 reject_low 11,15,17 ALIGNMENT 0 YS2-15k22.p1k chrm 688 62 34953 34952 C 627 0.00 1203 reject_low 26 ALIGNMENT 0 YS2-15k22.p1k chrm 714 848 71262 71261 F 135 0.00 1203 reject_low 5,18 ALIGNMENT 0 YS2-15k22.q1k chrm 159 62 53870 53869 C 98 0.00 1224 reject_low 9 ALIGNMENT 45 YS2-15k22.q1k chrm 826 874 11499 11547 F 49 97.96 1224 reject_low 20 ALIGNMENT 48 YS2-15k22.q1k chrm 210 161 11039 11088 C 50 100.00 1224 reject_low 15 ALIGNMENT 0 YS2-15k22.q1k chrm 688 845 53757 53756 F 158 0.00 1224 reject_low 13 ALIGNMENT 0 YS2-15k22.p1k chrm 801 706 53723 53827 C 96 0.00 1203 reject_low 1 ALIGNMENT 0 YS2-15k22.p1k chrm 62 671 4544 4543 F 610 0.00 1203 reject_low 11,15,17 ALIGNMENT 0 YS2-15k22.p1k chrm 62 626 47437 47436 F 565 0.00 1203 reject_low 9,22 ALIGNMENT 0 YS2-15k22.p1k chrm 848 714 11500 11499 C 135 0.00 1203 reject_low 12 ALIGNMENT 0 YS2-15k22.q1k chrm 773 262 47576 48042 C 512 0.00 1224 reject_low 25 ALIGNMENT 0 YS2-15k22.q1k chrm 62 677 53663 53662 F 616 0.00 1224 reject_low 2 ALIGNMENT 0 YS2-15k22.q1k chrm 159 62 11549 11548 C 98 0.00 1224 reject_low 11 ALIGNMENT 20 YS2-15k22.q1k chrm 658 634 57299 57324 C 25 96.00 1224 reject_low 22 ALIGNMENT 0 YS2-15k22.q1k chrm 845 680 81522 81521 C 166 0.00 1224 reject_low 5 ALIGNMENT 41 YS2-15k22.p1k chrm 714 669 80494 80540 C 46 97.83 1203 reject_low 23 ALIGNMENT 43 YS2-15k22.q1k chrm 812 874 10726 10787 F 63 90.48 1224 reject_low 8 ALIGNMENT 30 YS2-15k22.p1k chrm 706 672 10746 10780 C 35 100.00 1203 reject_low 24 ALIGNMENT 0 YS2-15k22.p1k chrm 624 62 11130 11129 C 563 0.00 1203 reject_low 8 ALIGNMENT 46 YS2-15k22.q1k chrm 802 873 69024 69094 F 72 88.89 1224 reject_low 7 ALIGNMENT 50 YS2-15k22.p1k chrm 664 729 57030 57093 F 66 93.94 1203 reject_low 3,4 ALIGNMENT 0 YS2-15k22.q1k chrm 159 62 81447 81446 C 98 0.00 1224 reject_low 18 ALIGNMENT 0 YS2-15k22.q1k chrm 845 236 11476 11475 C 610 0.00 1224 reject_low 11 ALIGNMENT 512 YS2-15k22.q1k chrm 39 686 47353 48007 F 648 98.46 1224 reject_bad_break 0 ALIGNMENT 0 YS2-15k22.q1k chrm 160 62 11089 11088 C 99 0.00 1224 reject_low 15 ALIGNMENT 294 YS2-15k22.q1k chrm 731 1224 48001 48497 F 494 92.31 1224 reject_low 1 ALIGNMENT 0 YS2-15k22.q1k chrm 62 119 56989 56988 F 58 0.00 1224 reject_low 14 ALIGNMENT 0 YS2-15k22.p1k chrm 746 713 82963 83047 C 34 0.00 1203 reject_low 6,7,10 ALIGNMENT 36 YS2-15k22.q1k chrm 834 874 53828 53868 F 41 100.00 1224 reject_low 2 ALIGNMENT 54 YS2-15k22.q1k chrm 910 810 56993 57093 C 101 88.12 1224 reject_low 22 ALIGNMENT 21 YS2-15k22.p1k chrm 881 906 57298 57324 F 26 96.15 1203 reject_low 3,4 ALIGNMENT 47 YS2-15k22.q1k chrm 911 774 47437 47575 C 138 84.06 1224 reject_low 25 ALIGNMENT 0 YS2-15k22.p1k chrm 62 663 57030 57029 F 602 0.00 1203 reject_low 3,4 ALIGNMENT 56 YS2-15k22.p1k chrm 857 802 53667 53722 C 56 100.00 1203 reject_low 1 ALIGNMENT 0 YS2-15k22.q1k chrm 229 845 57095 57094 F 617 0.00 1224 reject_low 14 ALIGNMENT 38 YS2-15k22.q1k chrm 202 160 81404 81446 C 43 100.00 1224 reject_low 18 ALIGNMENT 42 YS2-15k22.q1k chrm 120 228 56989 57095 F 109 84.40 1224 reject_low 14 ALIGNMENT 0 YS2-15k22.q1k chrm 62 730 48001 48000 F 669 0.00 1224 reject_low 1 ALIGNMENT 932 YS2-15k23.q1k chr15 1140 36 739060 740175 C 1105 95.93 1151 accept 0 ALIGNMENT 905 YS2-15k23.p1k chr15 46 1145 735548 736634 F 1100 95.91 1156 accept 0 ALIGNMENT 24 YS2-15k24.q1k chr08 263 221 169165 169207 C 43 90.70 1186 reject_low 1 ALIGNMENT 0 YS2-15k24.q1k chr08 220 62 169208 169207 C 159 0.00 1186 reject_low 1 ALIGNMENT 856 YS2-15k24.p1k chr04 89 1120 1341553 1342582 F 1032 95.45 1127 accept 0 ALIGNMENT 991 YS2-15k24.q1k chr04 1163 43 1345634 1346747 C 1121 97.23 1186 accept 0 ALIGNMENT 23 YS2-15k24.q1k chr02 224 258 455751 455785 F 35 94.29 1186 reject_low 3 ALIGNMENT 0 YS2-15k24.q1k chr02 62 223 455751 455750 F 162 0.00 1186 reject_low 3 ALIGNMENT 0 YS2-15k24.q1k chr05 257 835 72325 72324 F 579 0.00 1186 reject_low 5 ALIGNMENT 0 YS2-15k24.q1k chr13 224 62 588638 588637 C 163 0.00 1186 reject_low 2 ALIGNMENT 0 YS2-15k24.q1k chr05 62 232 72302 72301 F 171 0.00 1186 reject_low 5 ALIGNMENT 0 YS2-15k24.q1k chr08 835 264 169166 169165 C 572 0.00 1186 reject_low 1 ALIGNMENT 20 YS2-15k24.q1k chr15 262 237 936841 936866 C 26 100.00 1186 reject_low 4 ALIGNMENT 23 YS2-15k24.q1k chr13 263 225 588599 588637 C 39 92.31 1186 reject_low 2 ALIGNMENT 0 YS2-15k24.q1k chr02 259 835 455785 455784 F 577 0.00 1186 reject_low 3 ALIGNMENT 0 YS2-15k24.q1k chr15 236 62 936867 936866 C 175 0.00 1186 reject_low 4 ALIGNMENT 0 YS2-15k24.q1k chr13 835 264 588600 588599 C 572 0.00 1186 reject_low 2 ALIGNMENT 20 YS2-15k24.q1k chr05 233 256 72302 72325 F 24 100.00 1186 reject_low 5 ALIGNMENT 0 YS2-15k24.q1k chr15 835 263 936842 936841 C 573 0.00 1186 reject_low 4 ALIGNMENT 0 YS2-15l01.q1k chr10 257 217 606369 606368 C 41 0.00 257 accept_chi 1 ALIGNMENT 36 YS2-15l01.q1k vc_5 254 219 1 36 C 36 100.00 257 reject_low 8 ALIGNMENT 42 YS2-15l01.q1k vc_4 216 257 5830 5871 F 42 100.00 257 reject_low 5 ALIGNMENT 166 YS2-15l01.q1k chr10 216 30 606368 606555 C 187 97.33 257 accept_chi 1 ALIGNMENT 0 YS2-15l01.q1k vc_7 62 219 13525 13524 F 158 0.00 257 reject_low 7 ALIGNMENT 42 YS2-15l01.q1k vc_3 257 216 2472 2513 C 42 100.00 257 reject_low 4 ALIGNMENT 0 YS2-15l01.q1k vc_4 62 215 5830 5829 F 154 0.00 257 reject_low 5 ALIGNMENT 42 YS2-15l01.q1k vc_2 257 216 2105 2146 C 42 100.00 257 reject_low 3 ALIGNMENT 0 YS2-15l01.q1k vc_1 215 62 2514 2513 C 154 0.00 257 reject_low 2 ALIGNMENT 39 YS2-15l01.q1k vc_5 257 219 5025 5063 C 39 100.00 257 reject_low 6 ALIGNMENT 42 YS2-15l01.q1k vc_1 257 216 2472 2513 C 42 100.00 257 reject_low 2 ALIGNMENT 0 YS2-15l01.q1k vc_3 215 62 2514 2513 C 154 0.00 257 reject_low 4 ALIGNMENT 0 YS2-15l01.q1k vc_5 218 62 5064 5063 C 157 0.00 257 reject_low 6 ALIGNMENT 0 YS2-15l01.q1k vc_2 215 62 2147 2146 C 154 0.00 257 reject_low 3 ALIGNMENT 38 YS2-15l01.q1k vc_7 220 257 13525 13562 F 38 100.00 257 reject_low 7 ALIGNMENT 167 YS2-15l01.p1k chr10 32 215 606372 606555 F 184 97.83 231 accept_chi 0 ALIGNMENT 0 YS2-15l01.p1k chr10 216 231 606555 606554 F 16 0.00 231 accept_chi 0 ALIGNMENT 0 YS2-15l01.q1k vc_5 218 62 37 36 C 157 0.00 257 reject_low 8 ALIGNMENT 965 YS2-15l04.q1k chr07 29 1269 656638 657883 F 1241 94.04 1278 accept 0 ALIGNMENT 1018 YS2-15l04.p1k chr07 1204 29 659806 660987 C 1176 96.85 1226 accept 0 ALIGNMENT 292 YS2-15l05.p1k chr16 31 341 211078 211388 F 311 99.68 360 accept_chi 2 ALIGNMENT 425 YS2-15l05.q1k chr12 91 683 458036 458619 F 593 92.58 1446 reject_bad_break 0 ALIGNMENT 0 YS2-15l05.p1k chr16 342 360 211388 211387 F 19 0.00 360 accept_chi 2 ALIGNMENT 0 YS2-15l05.q1k chr12 684 690 467757 467752 F 7 0.00 1446 reject_bad_break 1 ALIGNMENT 29 YS2-15l05.q1k chr12 691 746 467753 467807 F 56 85.71 1446 reject_bad_break 1 ALIGNMENT 29 YS2-15l05.q1k chr12 691 746 458616 458670 F 56 85.71 1446 reject_bad_break 0 ALIGNMENT 425 YS2-15l05.q1k chr12 91 683 467173 467756 F 593 92.58 1446 reject_bad_break 1 ALIGNMENT 0 YS2-15l05.q1k chr12 684 690 458620 458615 F 7 0.00 1446 reject_bad_break 0 ALIGNMENT 745 YS2-15l06.q1k chr14 979 43 277149 278072 C 937 95.30 1241 accept_chi 1 ALIGNMENT 857 YS2-15l06.p1k chr07 34 1100 994557 995638 F 1067 94.75 1241 accept_chi 0 ALIGNMENT 0 YS2-15l07.p1k chr12 356 62 490544 490543 C 295 0.00 1302 reject_low 3 ALIGNMENT 683 YS2-15l07.p1k chr12 1147 357 489754 490543 C 791 95.83 1302 reject_low 3 ALIGNMENT 1052 YS2-15l07.p1k chr12 1265 31 460805 462038 C 1235 95.71 1302 accept 0 ALIGNMENT 1052 YS2-15l07.p1k chr12 1265 31 451668 452901 C 1235 95.71 1302 reject_low 2 ALIGNMENT 746 YS2-15l07.q1k chr12 32 1038 467144 468120 F 1007 93.84 1307 reject_low 1 ALIGNMENT 746 YS2-15l07.q1k chr12 32 1038 458007 458983 F 1007 93.84 1307 accept 0 ALIGNMENT 735 YS2-15l08.q1k chr15 1015 49 591378 592360 C 967 93.80 1368 accept 0 ALIGNMENT 1053 YS2-15l08.p1k chr15 35 1273 587234 588488 F 1239 96.05 1305 accept 0 ALIGNMENT 944 YS2-15l09.p1k chr07 1133 36 666778 667864 C 1098 96.36 1272 accept 0 ALIGNMENT 919 YS2-15l09.q1k chr07 37 1121 662145 663248 F 1085 95.85 1270 accept 0 ALIGNMENT 1008 YS2-15l10.p1k chr04 1179 35 1130761 1131898 C 1145 97.64 1252 accept_chi 0 ALIGNMENT 222 YS2-15l10.q1k chr09 650 54 273199 273789 C 597 80.23 1445 accept_chi 1 ALIGNMENT 956 YS2-15l11.p1k chr04 1235 36 1075788 1077005 C 1200 94.58 1251 accept 0 ALIGNMENT 236 YS2-15l12.q1k vc_1 1 296 2689 2987 F 296 93.92 948 reject_low 3 ALIGNMENT 236 YS2-15l12.q1k vc_2 1 296 2322 2620 F 296 93.92 948 reject_low 4 ALIGNMENT 51 YS2-15l12.q1k vc_7 54 3 6360 6411 C 52 100.00 948|1,0 reject_low 6 ALIGNMENT 236 YS2-15l12.q1k vc_3 1 296 2689 2987 F 296 93.92 948 reject_low 5 ALIGNMENT 0 YS2-15l12.q1k vc_7 53 54 5172 6360 C 0 0.00 948 reject_low 6 ALIGNMENT 182 YS2-15l12.q1k vc_7 296 53 4926 5172 C 244 92.21 948|0,1 reject_low 6 ALIGNMENT 274 YS2-15l12.q1k vc_7 430 1 2142 2569 C 430 89.07 948 reject_low 1 ALIGNMENT 265 YS2-15l12.q1k vc_4 419 1 5236 5654 C 419 89.02 948 reject_low 2 ALIGNMENT 279 YS2-15l12.q1k vc_5 1 496 2556 3045 F 496 87.10 948 reject_vc 0 ALIGNMENT 118 YS2-15l13.q1k chr13 74 249 440200 440373 F 176 91.48 1609 accept 0 ALIGNMENT 900 YS2-15l13.p1k chr13 1072 34 444041 445087 C 1039 96.44 1220 accept 0 ALIGNMENT 0 YS2-15l14.p1k chr12 815 626 451420 451419 C 190 0.00 1262 reject_low 3 ALIGNMENT 545 YS2-15l14.p1k chr12 1151 278 460005 460916 C 874 89.13 1262 accept 0 ALIGNMENT 684 YS2-15l14.q1k chr12 1 744 456335 457072 F 744 98.25 1067 accept 0 ALIGNMENT 0 YS2-15l14.p1k chr12 815 271 489755 489754 C 545 0.00 1262 reject_low 4 ALIGNMENT 499 YS2-15l14.p1k chr12 625 31 451419 452026 C 595 96.13 1262 reject_low 3 ALIGNMENT 215 YS2-15l14.p1k chr12 270 31 489754 489994 C 240 97.08 1262 reject_low 4 ALIGNMENT 684 YS2-15l14.q1k chr12 1 744 465472 466209 F 744 98.25 1067 reject_low 1 ALIGNMENT 0 YS2-15l14.p1k chr12 277 62 460917 460916 C 216 0.00 1262 accept 0 ALIGNMENT 0 YS2-15l14.p1k chr12 815 640 460543 460542 C 176 0.00 1262 reject_low 2 ALIGNMENT 509 YS2-15l14.p1k chr12 639 31 460542 461163 C 609 96.06 1262 reject_low 2 ALIGNMENT 0 YS2-15l16.p1k chr07 295 312 194881 194880 F 18 0.00 312 accept 0 ALIGNMENT 253 YS2-15l16.p1k chr07 34 294 194621 194881 F 261 100.00 312 accept 0 ALIGNMENT 538 YS2-15l17.q1k chr08 20 721 310442 311129 F 702 94.02 1117 accept 0 ALIGNMENT 923 YS2-15l17.p1k chr08 1119 35 313507 314591 C 1085 96.04 1318 accept 0 ALIGNMENT 964 YS2-15l18.p1k chr07 37 1101 524415 525490 F 1065 97.46 1280 accept 0 ALIGNMENT 1020 YS2-15l20.q1k chr03 30 1226 229209 230418 F 1197 95.99 1245 accept 0 ALIGNMENT 946 YS2-15l20.p1k chr03 1156 34 230829 231936 C 1123 96.71 1237 accept 0 ALIGNMENT 976 YS2-15l21.q1k chr12 1228 40 395539 396732 C 1189 95.12 1252 accept 0 ALIGNMENT 710 YS2-15l21.p1k chr12 42 1182 392380 393540 F 1141 89.13 1185 accept 0 ALIGNMENT 147 YS2-15l22.q1k chr06 454 65 108906 109283 C 390 82.05 1284 accept 0 ALIGNMENT 0 YS2-15l23.p1k chr04 932 62 226867 226866 C 871 0.00 1162 reject_low 3 ALIGNMENT 0 YS2-15l23.p1k chr04 62 952 323678 323677 F 891 0.00 1162 reject_low 4 ALIGNMENT 0 YS2-15l23.p1k chr04 62 929 226812 226811 F 868 0.00 1162 reject_low 2 ALIGNMENT 23 YS2-15l23.p1k chr04 986 933 226813 226866 C 54 87.04 1162 reject_low 3 ALIGNMENT 21 YS2-15l23.p1k chr04 953 988 323678 323713 F 36 94.44 1162 reject_low 4 ALIGNMENT 30 YS2-15l23.p1k chr04 930 994 226812 226877 F 65 83.08 1162 reject_low 2 ALIGNMENT 856 YS2-15l23.p1k chr04 1147 35 864712 865797 C 1113 95.06 1162 accept_chi 0 ALIGNMENT 462 YS2-15l23.q1k chr04 51 878 663915 664719 F 828 88.16 1400 accept_chi 1 ALIGNMENT 820 YS2-15l24.q1k chr03 980 27 144240 145180 C 954 97.27 1239 accept 0 ALIGNMENT 955 YS2-15l24.p1k chr03 31 1140 140379 141477 F 1110 96.94 1147 accept 0 ALIGNMENT 334 YS2-15m01.p1k chr12 872 248 871228 871851 C 625 85.44 1337 accept 0 ALIGNMENT 109 YS2-15m02.p1k chr11 1254 1027 432131 432365 C 228 84.65 1258 reject_low 1 ALIGNMENT 0 YS2-15m02.p1k chr11 1026 62 432366 432365 C 965 0.00 1258 reject_low 1 ALIGNMENT 994 YS2-15m02.q1k chr08 26 1202 101129 102321 F 1177 95.50 1212 accept 0 ALIGNMENT 998 YS2-15m02.p1k chr08 1254 34 104854 106083 C 1221 95.25 1258 accept 0 ALIGNMENT 0 YS2-15m03.q1k vc_1 365 62 2514 2513 C 304 0.00 407 reject_low 6 ALIGNMENT 0 YS2-15m03.p1k chr04 341 380 44623 44622 F 40 0.00 380 reject_low 4 ALIGNMENT 0 YS2-15m03.q1k chr04 407 236 44442 44441 C 172 0.00 407 reject_low 5 ALIGNMENT 39 YS2-15m03.q1k vc_5 407 369 5025 5063 C 39 100.00 407 reject_low 10 ALIGNMENT 0 YS2-15m03.q1k vc_5 368 62 5064 5063 C 307 0.00 407 reject_low 10 ALIGNMENT 336 YS2-15m03.p1k chr10 362 26 520871 521207 C 337 100.00 380 accept_chi 0 ALIGNMENT 0 YS2-15m03.p1k chr12 380 346 96935 96934 C 35 0.00 380 reject_low 2 ALIGNMENT 42 YS2-15m03.q1k vc_4 366 407 5830 5871 F 42 100.00 407 reject_low 9 ALIGNMENT 42 YS2-15m03.q1k vc_2 407 366 2105 2146 C 42 100.00 407 reject_low 7 ALIGNMENT 60 YS2-15m03.q1k chr04 235 53 44441 44623 C 183 77.60 407 reject_low 5 ALIGNMENT 0 YS2-15m03.p1k chr10 380 363 520872 520871 C 18 0.00 380 accept_chi 0 ALIGNMENT 36 YS2-15m03.q1k vc_5 404 369 1 36 C 36 100.00 407 reject_low 12 ALIGNMENT 0 YS2-15m03.p1k chr04 62 157 44441 44440 F 96 0.00 380 reject_low 4 ALIGNMENT 0 YS2-15m03.q1k vc_4 62 365 5830 5829 F 304 0.00 407 reject_low 9 ALIGNMENT 0 YS2-15m03.q1k vc_7 62 369 13525 13524 F 308 0.00 407 reject_low 11 ALIGNMENT 0 YS2-15m03.q1k vc_2 365 62 2147 2146 C 304 0.00 407 reject_low 7 ALIGNMENT 0 YS2-15m03.q1k chr10 368 407 521207 521206 F 40 0.00 407 accept_chi 1 ALIGNMENT 60 YS2-15m03.p1k chr04 158 340 44441 44623 F 183 77.60 380 reject_low 4 ALIGNMENT 0 YS2-15m03.q1k chr12 230 407 97115 97114 F 178 0.00 407 reject_low 3 ALIGNMENT 66 YS2-15m03.q1k chr12 52 229 96938 97115 F 178 79.78 407 reject_low 3 ALIGNMENT 0 YS2-15m03.q1k vc_3 365 62 2514 2513 C 304 0.00 407 reject_low 8 ALIGNMENT 331 YS2-15m03.q1k chr10 32 367 520871 521207 F 336 99.70 407 accept_chi 1 ALIGNMENT 0 YS2-15m03.q1k vc_5 368 62 37 36 C 307 0.00 407 reject_low 12 ALIGNMENT 38 YS2-15m03.q1k vc_7 370 407 13525 13562 F 38 100.00 407 reject_low 11 ALIGNMENT 42 YS2-15m03.q1k vc_1 407 366 2472 2513 C 42 100.00 407 reject_low 6 ALIGNMENT 70 YS2-15m03.p1k chr12 345 164 96934 97115 C 182 80.22 380 reject_low 2 ALIGNMENT 42 YS2-15m03.q1k vc_3 407 366 2472 2513 C 42 100.00 407 reject_low 8 ALIGNMENT 0 YS2-15m03.p1k chr12 163 62 97116 97115 C 102 0.00 380 reject_low 2 ALIGNMENT 0 YS2-15m05.p1k chr07 62 377 649857 649856 F 316 0.00 1313 reject_low 1 ALIGNMENT 985 YS2-15m05.q1k chr16 1237 37 554670 555881 C 1201 95.34 1319 accept 0 ALIGNMENT 108 YS2-15m05.p1k chr07 378 808 649857 650287 F 431 75.64 1313 reject_low 1 ALIGNMENT 0 YS2-15m05.p1k chr07 809 836 650287 650286 F 28 0.00 1313 reject_low 1 ALIGNMENT 958 YS2-15m05.p1k chr16 41 1185 550553 551709 F 1145 94.76 1313 accept 0 ALIGNMENT 958 YS2-15m07.p1k chr10 1213 26 237851 239046 C 1188 94.36 1268 accept 0 ALIGNMENT 944 YS2-15m07.q1k chr10 30 1104 237013 238103 F 1075 96.74 1264 accept 0 ALIGNMENT 939 YS2-15m08.p1k chr07 39 1171 63890 65036 F 1133 96.20 1260 accept 0 ALIGNMENT 892 YS2-15m08.q1k chr07 1079 31 64116 65179 C 1049 96.95 1282 accept 0 ALIGNMENT 0 YS2-15m11.q1k chr12 62 365 485696 485695 F 304 0.00 1301 reject_low 6 ALIGNMENT 0 YS2-15m11.q1k chr12 485 846 472582 472581 F 362 0.00 1301 reject_low 4 ALIGNMENT 429 YS2-15m11.q1k chr12 41 484 468487 468930 F 444 99.77 1301 reject_low 2 ALIGNMENT 22 YS2-15m11.q1k chr12 1071 1132 460419 460485 F 62 80.65 1301 reject_bad_break 0 ALIGNMENT 119 YS2-15m11.q1k chr12 366 484 472464 472582 F 119 100.00 1301 reject_low 4 ALIGNMENT 119 YS2-15m11.q1k chr12 366 484 482044 482162 F 119 100.00 1301 reject_low 5 ALIGNMENT 0 YS2-15m11.q1k chr12 62 365 482044 482043 F 304 0.00 1301 reject_low 5 ALIGNMENT 59 YS2-15m11.q1k chr06 106 41 31622 31687 C 66 98.48 1301 reject_low 7 ALIGNMENT 0 YS2-15m11.q1k chr06 846 107 31623 31622 C 740 0.00 1301 reject_low 7 ALIGNMENT 0 YS2-15m11.q1k chr12 485 846 468930 468929 F 362 0.00 1301 reject_low 2 ALIGNMENT 0 YS2-15m11.q1k chr12 62 365 489348 489347 F 304 0.00 1301 reject_low 3 ALIGNMENT 970 YS2-15m11.p1k chr12 1144 35 453484 454610 C 1110 95.95 1316 reject_low 1 ALIGNMENT 0 YS2-15m11.q1k chr12 485 846 482162 482161 F 362 0.00 1301 reject_low 5 ALIGNMENT 119 YS2-15m11.q1k chr12 366 484 485696 485814 F 119 100.00 1301 reject_low 6 ALIGNMENT 0 YS2-15m11.q1k chr12 500 846 489481 489480 F 347 0.00 1301 reject_low 3 ALIGNMENT 0 YS2-15m11.q1k chr12 1061 1070 460397 460418 F 10 0.00 1301 reject_bad_break 0 ALIGNMENT 128 YS2-15m11.q1k chr12 366 499 489348 489481 F 134 98.51 1301 reject_low 3 ALIGNMENT 970 YS2-15m11.p1k chr12 1144 35 462621 463747 C 1110 95.95 1316 reject_bad_break 0 ALIGNMENT 821 YS2-15m11.q1k chr12 41 1060 459350 460396 F 1020 95.20 1301 reject_bad_break 0 ALIGNMENT 0 YS2-15m11.q1k chr12 485 846 485814 485813 F 362 0.00 1301 reject_low 6 ALIGNMENT 0 YS2-15m11.q1k chr12 62 365 472464 472463 F 304 0.00 1301 reject_low 4 ALIGNMENT 925 YS2-15m12.p1k chr14 1097 41 529517 530589 C 1057 96.69 1304 accept_chi 0 ALIGNMENT 914 YS2-15m12.q1k chr10 38 1170 264525 265667 F 1133 94.79 1294 accept_chi 1 ALIGNMENT 39 YS2-15m13.q1k vc_5 321 283 5025 5063 C 39 100.00 321 reject_low 6 ALIGNMENT 0 YS2-15m13.q1k vc_4 62 280 5831 5830 F 219 0.00 321 reject_low 5 ALIGNMENT 0 YS2-15m13.q1k vc_7 62 283 13525 13524 F 222 0.00 321 reject_low 7 ALIGNMENT 0 YS2-15m13.q1k vc_1 280 62 2513 2512 C 219 0.00 321 reject_low 2 ALIGNMENT 41 YS2-15m13.q1k vc_2 321 281 2105 2145 C 41 100.00 321 reject_low 3 ALIGNMENT 0 YS2-15m13.q1k vc_3 280 62 2513 2512 C 219 0.00 321 reject_low 4 ALIGNMENT 41 YS2-15m13.q1k vc_3 321 281 2472 2512 C 41 100.00 321 reject_low 4 ALIGNMENT 36 YS2-15m13.q1k vc_5 318 283 1 36 C 36 100.00 321 reject_low 8 ALIGNMENT 41 YS2-15m13.q1k vc_1 321 281 2472 2512 C 41 100.00 321 reject_low 2 ALIGNMENT 0 YS2-15m13.q1k vc_2 280 62 2146 2145 C 219 0.00 321 reject_low 3 ALIGNMENT 38 YS2-15m13.q1k vc_7 284 321 13525 13562 F 38 100.00 321 reject_low 7 ALIGNMENT 0 YS2-15m13.q1k chr13 321 282 722326 722325 C 40 0.00 321 accept_chi 1 ALIGNMENT 41 YS2-15m13.q1k vc_4 281 321 5831 5871 F 41 100.00 321 reject_low 5 ALIGNMENT 0 YS2-15m13.q1k vc_5 282 62 5064 5063 C 221 0.00 321 reject_low 6 ALIGNMENT 236 YS2-15m13.q1k chr13 281 37 722325 722569 C 245 99.59 321 accept_chi 1 ALIGNMENT 0 YS2-15m13.q1k vc_5 282 62 37 36 C 221 0.00 321 reject_low 8 ALIGNMENT 238 YS2-15m13.p1k chr13 29 278 722325 722574 F 250 99.20 292 accept_chi 0 ALIGNMENT 21 YS2-15m14.q1k chr07 890 840 431410 431460 C 51 96.08 1232 reject_low 2 ALIGNMENT 23 YS2-15m14.q1k chr13 827 889 238311 238373 F 63 88.89 1232 reject_low 1 ALIGNMENT 0 YS2-15m14.q1k chr07 839 62 431461 431460 C 778 0.00 1232 reject_low 2 ALIGNMENT 0 YS2-15m14.q1k chr13 62 826 238311 238310 F 765 0.00 1232 reject_low 1 ALIGNMENT 1022 YS2-15m14.p1k chr15 1217 32 1040622 1041795 C 1186 96.80 1217 accept 0 ALIGNMENT 968 YS2-15m14.q1k chr15 39 1114 1036713 1037776 F 1076 98.05 1232 accept 0 ALIGNMENT 957 YS2-15m16.q1k chr03 1122 41 49236 50319 C 1082 96.40 1281 accept 0 ALIGNMENT 938 YS2-15m16.p1k chr03 34 1139 45036 46135 F 1106 96.11 1241 accept 0 ALIGNMENT 1021 YS2-15m19.p1k chr07 31 1195 683930 685100 F 1165 96.74 1195 accept 0 ALIGNMENT 944 YS2-15m19.q1k chr07 1090 24 684192 685245 C 1067 98.22 1179 accept 0 ALIGNMENT 993 YS2-15m20.q1k chr12 1148 30 456938 458059 C 1119 96.51 1151 accept 0 ALIGNMENT 993 YS2-15m20.q1k chr12 1148 30 466075 467196 C 1119 96.51 1151 accept 1 ALIGNMENT 967 YS2-15m20.p1k chr12 38 1134 453198 454300 F 1097 96.54 1198 accept 0 ALIGNMENT 967 YS2-15m20.p1k chr12 38 1134 462335 463437 F 1097 96.54 1198 accept 1 ALIGNMENT 945 YS2-15m21.p1k chr09 1093 30 240573 241634 C 1064 96.99 1173 accept 0 ALIGNMENT 1002 YS2-15m21.q1k chr09 36 1083 239249 240298 F 1048 98.85 1104 accept 0 ALIGNMENT 0 YS2-15m21.q1k chr05 104 62 300334 300333 C 43 0.00 1104 reject_low 1 ALIGNMENT 343 YS2-15m21.q1k chr05 864 105 299574 300333 C 760 81.97 1104 reject_low 1 ALIGNMENT 0 YS2-15m22.q1k vc_4 62 272 5831 5830 F 211 0.00 313 reject_vc 3 ALIGNMENT 0 YS2-15m22.q1k vc_5 274 62 37 36 C 213 0.00 313 reject_vc 6 ALIGNMENT 0 YS2-15m22.q1k vc_7 62 275 13525 13524 F 214 0.00 313 reject_vc 5 ALIGNMENT 38 YS2-15m22.q1k vc_7 276 313 13525 13562 F 38 100.00 313 reject_vc 5 ALIGNMENT 0 YS2-15m22.q1k vc_1 272 62 2513 2512 C 211 0.00 313 reject_vc 0 ALIGNMENT 41 YS2-15m22.q1k vc_3 313 273 2472 2512 C 41 100.00 313 reject_vc 2 ALIGNMENT 41 YS2-15m22.q1k vc_2 313 273 2105 2145 C 41 100.00 313 reject_vc 1 ALIGNMENT 0 YS2-15m22.q1k vc_2 272 62 2146 2145 C 211 0.00 313 reject_vc 1 ALIGNMENT 36 YS2-15m22.q1k vc_5 310 275 1 36 C 36 100.00 313 reject_vc 6 ALIGNMENT 0 YS2-15m22.q1k vc_3 272 62 2513 2512 C 211 0.00 313 reject_vc 2 ALIGNMENT 39 YS2-15m22.q1k vc_5 313 275 5025 5063 C 39 100.00 313 reject_vc 4 ALIGNMENT 41 YS2-15m22.q1k vc_4 273 313 5831 5871 F 41 100.00 313 reject_vc 3 ALIGNMENT 41 YS2-15m22.q1k vc_1 313 273 2472 2512 C 41 100.00 313 reject_vc 0 ALIGNMENT 0 YS2-15m22.q1k vc_5 274 62 5064 5063 C 213 0.00 313 reject_vc 4 ALIGNMENT 905 YS2-15m23.p1k chr12 1115 29 969119 970235 C 1087 96.14 1148 accept 0 ALIGNMENT 1009 YS2-15m23.q1k chr12 41 1160 965192 966309 F 1120 97.32 1162 accept 0 ALIGNMENT 924 YS2-15m24.q1k chr15 1074 39 732210 733232 C 1036 98.26 1198 accept 0 ALIGNMENT 967 YS2-15m24.p1k chr15 34 1167 731757 732893 F 1134 96.65 1172 accept 0 ALIGNMENT 114 YS2-15n01.p1k chr16 751 354 931369 931766 C 398 76.63 1251 ambiguous_tel 1 ALIGNMENT 45 YS2-15n01.p1k chr06 727 611 28253 28369 C 117 79.49 1251 ambiguous_tel 0 ALIGNMENT 0 YS2-15n01.p1k chr06 610 522 28370 28443 C 89 0.00 1251 ambiguous_tel 0 ALIGNMENT 0 YS2-15n01.p1k chr16 353 62 931767 931766 C 292 0.00 1251 ambiguous_tel 1 ALIGNMENT 0 YS2-15n01.p1k chr16 861 752 931370 931369 C 110 0.00 1251 ambiguous_tel 1 ALIGNMENT 88 YS2-15n01.p1k chr06 521 51 28444 28914 C 471 73.46 1251 ambiguous_tel 0 ALIGNMENT 0 YS2-15n01.p1k chr06 861 728 28254 28253 C 134 0.00 1251 ambiguous_tel 0 ALIGNMENT 992 YS2-15n02.p1k chr04 1222 39 423804 424996 C 1184 95.35 1262 accept 0 ALIGNMENT 444 YS2-15n02.q1k chr04 54 670 420006 420609 F 617 93.35 1289 accept 0 ALIGNMENT 186 YS2-15n03.p1k chr13 230 33 332900 333097 C 198 99.49 247 accept 0 ALIGNMENT 0 YS2-15n03.p1k chr13 247 231 332901 332900 C 17 0.00 247 accept 0 ALIGNMENT 946 YS2-15n04.p1k chr15 29 1130 691841 692953 F 1102 96.19 1267 accept 0 ALIGNMENT 0 YS2-15n05.p1k vc_4 62 810 5871 5870 F 749 0.00 1300 reject_low 4 ALIGNMENT 170 YS2-15n05.p1k vc_2 1118 811 1783 2105 C 308 86.69 1300 reject_low 2 ALIGNMENT 170 YS2-15n05.p1k vc_1 1118 811 1783 2105 C 308 86.69 1300 reject_low 1 ALIGNMENT 170 YS2-15n05.p1k vc_3 1118 811 1783 2105 C 308 86.69 1300 reject_low 3 ALIGNMENT 0 YS2-15n05.p1k vc_5 810 62 5026 5025 C 749 0.00 1300 reject_low 5 ALIGNMENT 170 YS2-15n05.p1k vc_5 1118 811 4703 5025 C 308 86.69 1300 reject_low 5 ALIGNMENT 170 YS2-15n05.p1k vc_4 811 1118 5871 6193 F 308 86.69 1300 reject_low 4 ALIGNMENT 714 YS2-15n05.p1k chr03 792 39 175060 175812 C 754 99.07 1300 accept 0 ALIGNMENT 0 YS2-15n05.p1k vc_2 810 62 2106 2105 C 749 0.00 1300 reject_low 2 ALIGNMENT 0 YS2-15n05.p1k vc_3 810 62 2106 2105 C 749 0.00 1300 reject_low 3 ALIGNMENT 170 YS2-15n05.p1k vc_7 811 1118 100 422 F 308 86.69 1300 reject_low 6 ALIGNMENT 0 YS2-15n05.p1k vc_1 810 62 2106 2105 C 749 0.00 1300 reject_low 1 ALIGNMENT 0 YS2-15n05.p1k vc_7 62 810 100 99 F 749 0.00 1300 reject_low 6 ALIGNMENT 0 YS2-15n05.p1k vc_7 62 810 13562 13561 F 749 0.00 1300 reject_low 7 ALIGNMENT 170 YS2-15n05.p1k vc_7 811 1118 13562 13884 F 308 86.69 1300 reject_low 7 ALIGNMENT 403 YS2-15n06.p1k vc_6 1 588 3712 4312 F 588 90.82 651 reject_vc 4 ALIGNMENT 397 YS2-15n06.p1k vc_7 1 588 456 1056 F 588 90.48 651 reject_vc 5 ALIGNMENT 403 YS2-15n06.p1k vc_2 588 1 1149 1749 C 588 91.16 651 reject_vc 1 ALIGNMENT 403 YS2-15n06.p1k vc_5 588 1 4069 4669 C 588 91.16 651 reject_vc 3 ALIGNMENT 403 YS2-15n06.p1k vc_1 588 1 1149 1749 C 588 91.16 651 reject_vc 0 ALIGNMENT 397 YS2-15n06.p1k vc_7 1 588 13918 14518 F 588 90.48 651 reject_vc 6 ALIGNMENT 403 YS2-15n06.p1k vc_3 588 1 1149 1749 C 588 91.16 651 reject_vc 2 ALIGNMENT 707 YS2-15n08.q1k chr13 16 913 800586 801475 F 898 94.32 1252 accept 0 ALIGNMENT 806 YS2-15n08.p1k chr13 1050 37 805121 806148 C 1014 93.98 1246 accept 0 ALIGNMENT 919 YS2-15n09.p1k chr13 30 1080 594645 595710 F 1051 96.29 1262 accept 0 ALIGNMENT 900 YS2-15n10.p1k chr13 35 1060 638746 639788 F 1026 96.69 1295 accept_chi 1 ALIGNMENT 956 YS2-15n10.q1k chr08 44 1120 272253 273330 F 1077 96.94 1288 accept_chi 0 ALIGNMENT 929 YS2-15n12.q1k chr11 1094 39 134386 135460 C 1056 97.16 1292 accept_chi 1 ALIGNMENT 975 YS2-15n12.p1k chr05 1191 37 359317 360486 C 1155 96.02 1336 accept_chi 0 ALIGNMENT 119 YS2-15n14.p1k chr12 526 408 472464 472582 C 119 100.00 1229 reject_low 5 ALIGNMENT 0 YS2-15n14.p1k chr12 787 527 472465 472464 C 261 0.00 1229 reject_low 5 ALIGNMENT 585 YS2-15n14.p1k chr12 1146 408 468193 468930 C 739 94.86 1229 reject_low 1 ALIGNMENT 0 YS2-15n14.p1k chr12 787 527 489349 489348 C 261 0.00 1229 reject_low 3 ALIGNMENT 119 YS2-15n14.p1k chr12 526 408 482044 482162 C 119 100.00 1229 reject_low 6 ALIGNMENT 878 YS2-15n14.p1k chr12 1146 35 459056 460178 C 1112 94.96 1229 accept 0 ALIGNMENT 128 YS2-15n14.p1k chr12 526 393 489348 489481 C 134 98.51 1229 reject_low 3 ALIGNMENT 0 YS2-15n14.p1k chr12 787 527 485697 485696 C 261 0.00 1229 reject_low 7 ALIGNMENT 82 YS2-15n14.p1k chr06 786 893 31622 31729 F 108 95.37 1229 reject_low 4 ALIGNMENT 0 YS2-15n14.p1k chr12 787 596 459607 459606 C 192 0.00 1229 reject_low 2 ALIGNMENT 0 YS2-15n14.p1k chr12 407 62 472583 472582 C 346 0.00 1229 reject_low 5 ALIGNMENT 0 YS2-15n14.p1k chr12 193 62 460017 460016 C 132 0.00 1229 reject_low 2 ALIGNMENT 359 YS2-15n14.p1k chr12 595 194 459606 460016 C 402 97.26 1229 reject_low 2 ALIGNMENT 119 YS2-15n14.p1k chr12 526 408 485696 485814 C 119 100.00 1229 reject_low 7 ALIGNMENT 0 YS2-15n14.p1k chr12 407 62 482163 482162 C 346 0.00 1229 reject_low 6 ALIGNMENT 0 YS2-15n14.p1k chr12 392 62 489482 489481 C 331 0.00 1229 reject_low 3 ALIGNMENT 0 YS2-15n14.p1k chr12 407 62 468931 468930 C 346 0.00 1229 reject_low 1 ALIGNMENT 0 YS2-15n14.p1k chr06 62 785 31622 31621 F 724 0.00 1229 reject_low 4 ALIGNMENT 0 YS2-15n14.p1k chr12 407 62 485815 485814 C 346 0.00 1229 reject_low 7 ALIGNMENT 0 YS2-15n14.p1k chr12 787 527 482045 482044 C 261 0.00 1229 reject_low 6 ALIGNMENT 532 YS2-15n15.p1k chr13 881 32 444246 445087 C 850 88.59 1309 accept 0 ALIGNMENT 635 YS2-15n16.p1k chr05 712 33 559504 560182 C 680 98.68 713 accept 0 ALIGNMENT 337 YS2-15n17.p1k chr04 643 169 1421057 1421512 C 475 92.84 1068 accept 0 ALIGNMENT 970 YS2-15n18.p1k chr15 29 1140 657517 658642 F 1112 96.67 1261 accept 0 ALIGNMENT 1005 YS2-15n21.p1k chr14 29 1143 111179 112288 F 1115 97.67 1160 accept 0 ALIGNMENT 0 YS2-15n22.p1k vc_2 1050 62 2106 2105 C 989 0.00 1157 reject_low 2 ALIGNMENT 0 YS2-15n22.p1k vc_5 1050 62 5026 5025 C 989 0.00 1157 reject_low 3 ALIGNMENT 61 YS2-15n22.p1k vc_5 1155 1051 4923 5025 C 105 87.62 1157 reject_low 3 ALIGNMENT 0 YS2-15n22.p1k vc_4 62 1050 5871 5870 F 989 0.00 1157 reject_low 4 ALIGNMENT 61 YS2-15n22.p1k vc_4 1051 1150 5871 5969 F 100 88.00 1157 reject_low 4 ALIGNMENT 0 YS2-15n22.p1k vc_7 62 1050 100 99 F 989 0.00 1157 reject_low 5 ALIGNMENT 61 YS2-15n22.p1k vc_7 1051 1150 100 198 F 100 88.00 1157 reject_low 5 ALIGNMENT 61 YS2-15n22.p1k vc_2 1155 1051 2003 2105 C 105 87.62 1157 reject_low 2 ALIGNMENT 677 YS2-15n22.p1k scplasm1 1032 31 1820 2823 C 1002 90.02 1157 accept_chi 0 ALIGNMENT 351 YS2-15n22.q1k scplasm1 148 739 1874 2464 F 592 87.84 1242 accept_chi 1 ALIGNMENT 909 YS2-15n24.q1k chr14 39 1071 406977 407995 F 1033 97.19 1201 accept 0 ALIGNMENT 0 YS2-15n24.q1k chr09 690 627 413408 413471 C 64 0.00 1201 reject_low 1 ALIGNMENT 0 YS2-15n24.q1k chr09 829 789 413311 413310 C 41 0.00 1201 reject_low 1 ALIGNMENT 26 YS2-15n24.q1k chr09 788 691 413310 413407 C 98 75.51 1201 reject_low 1 ALIGNMENT 230 YS2-15n24.q1k chr09 626 40 413472 414058 C 587 80.07 1201 reject_low 1 ALIGNMENT 937 YS2-15n24.p1k chr14 1114 33 407941 409011 C 1082 96.49 1196 accept 0 ALIGNMENT 958 YS2-15o01.q1k chr08 1067 31 348682 349718 C 1037 98.36 1067 accept 0 ALIGNMENT 879 YS2-15o01.p1k chr08 76 1134 344365 345425 F 1059 95.56 1212 accept 0 ALIGNMENT 0 YS2-15o02.q1k chr12 764 735 852680 852679 C 30 0.00 1154 accept_chi 0 ALIGNMENT 0 YS2-15o02.q1k vc_3 734 62 2513 2512 C 673 0.00 1154 reject_low 13 ALIGNMENT 100 YS2-15o02.q1k vc_5 775 938 2398 2552 F 164 90.85 1154 reject_low 7 ALIGNMENT 38 YS2-15o02.q1k vc_7 738 775 13525 13562 F 38 100.00 1154 reject_low 15 ALIGNMENT 0 YS2-15o02.q1k vc_4 62 734 5831 5830 F 673 0.00 1154 reject_low 9 ALIGNMENT 0 YS2-15o02.q1k vc_1 62 774 2531 2530 F 713 0.00 1154 reject_low 2 ALIGNMENT 36 YS2-15o02.q1k vc_5 772 737 1 36 C 36 100.00 1154 reject_low 16 ALIGNMENT 0 YS2-15o02.q1k vc_7 62 737 13525 13524 F 676 0.00 1154 reject_low 15 ALIGNMENT 0 YS2-15o02.q1k vc_5 62 774 2398 2397 F 713 0.00 1154 reject_low 7 ALIGNMENT 100 YS2-15o02.q1k vc_7 938 775 2573 2727 C 164 90.85 1154 reject_low 8 ALIGNMENT 0 YS2-15o02.q1k vc_5 736 62 5064 5063 C 675 0.00 1154 reject_low 14 ALIGNMENT 0 YS2-15o02.q1k vc_5 736 62 37 36 C 675 0.00 1154 reject_low 16 ALIGNMENT 100 YS2-15o02.q1k vc_4 775 938 126 280 F 164 90.85 1154 reject_low 5 ALIGNMENT 100 YS2-15o02.q1k vc_2 775 938 2164 2318 F 164 90.85 1154 reject_low 3 ALIGNMENT 0 YS2-15o02.q1k vc_4 774 62 5813 5812 C 713 0.00 1154 reject_low 6 ALIGNMENT 0 YS2-15o02.q1k vc_4 774 62 1535 1534 C 713 0.00 1154 reject_low 10 ALIGNMENT 0 YS2-15o02.q1k vc_4 62 774 126 125 F 713 0.00 1154 reject_low 5 ALIGNMENT 100 YS2-15o02.q1k vc_3 775 938 2531 2685 F 164 90.85 1154 reject_low 4 ALIGNMENT 75 YS2-15o02.q1k vc_4 863 775 1446 1534 C 89 95.51 1154 reject_low 10 ALIGNMENT 41 YS2-15o02.q1k vc_3 775 735 2472 2512 C 41 100.00 1154 reject_low 13 ALIGNMENT 41 YS2-15o02.q1k vc_1 775 735 2472 2512 C 41 100.00 1154 reject_low 11 ALIGNMENT 0 YS2-15o02.q1k vc_1 734 62 2513 2512 C 673 0.00 1154 reject_low 11 ALIGNMENT 665 YS2-15o02.q1k chr12 734 32 852679 853382 C 703 99.72 1154 accept_chi 0 ALIGNMENT 100 YS2-15o02.q1k vc_4 938 775 5658 5812 C 164 90.85 1154 reject_low 6 ALIGNMENT 0 YS2-15o02.q1k vc_4 776 775 5872 6353 F 0 0.00 1154 reject_low 9 ALIGNMENT 0 YS2-15o02.q1k vc_2 734 62 2146 2145 C 673 0.00 1154 reject_low 12 ALIGNMENT 41 YS2-15o02.q1k vc_4 735 775 5831 5871 F 41 100.00 1154 reject_low 9 ALIGNMENT 0 YS2-15o02.q1k vc_3 62 774 2531 2530 F 713 0.00 1154 reject_low 4 ALIGNMENT 0 YS2-15o02.q1k vc_2 62 774 2164 2163 F 713 0.00 1154 reject_low 3 ALIGNMENT 100 YS2-15o02.q1k vc_4 775 938 6353 6507 F 164 90.85 1154|1,0 reject_low 9 ALIGNMENT 0 YS2-15o02.p1k chr12 731 745 853382 853381 F 15 0.00 745 accept_chi 1 ALIGNMENT 41 YS2-15o02.q1k vc_2 775 735 2105 2145 C 41 100.00 1154 reject_low 12 ALIGNMENT 100 YS2-15o02.q1k vc_1 775 938 2531 2685 F 164 90.85 1154 reject_low 2 ALIGNMENT 0 YS2-15o02.q1k vc_7 774 62 2728 2727 C 713 0.00 1154 reject_low 8 ALIGNMENT 39 YS2-15o02.q1k vc_5 775 737 5025 5063 C 39 100.00 1154 reject_low 14 ALIGNMENT 661 YS2-15o02.p1k chr12 27 730 852679 853382 F 704 99.57 745 accept_chi 1 ALIGNMENT 1001 YS2-15o03.p1k chr12 1158 36 870886 872007 C 1123 96.79 1162 accept 0 ALIGNMENT 1006 YS2-15o03.q1k chr12 40 1188 867939 869096 F 1149 97.30 1189 accept 0 ALIGNMENT 874 YS2-15o04.p1k chr13 34 1033 139624 140612 F 1000 97.30 1178 accept 0 ALIGNMENT 816 YS2-15o04.q1k chr13 1019 32 144441 145411 C 988 96.26 1265 accept 0 ALIGNMENT 925 YS2-15o05.p1k chr04 1236 41 677633 678832 C 1196 93.81 1236 accept 0 ALIGNMENT 947 YS2-15o05.q1k chr04 37 1112 674106 675173 F 1076 97.12 1264 accept 0 ALIGNMENT 1034 YS2-15o06.q1k chr10 1212 40 125308 126479 C 1173 96.85 1243 accept 0 ALIGNMENT 948 YS2-15o06.p1k chr12 1147 33 22724 23855 C 1115 95.34 1215 ambiguous_tel 1 ALIGNMENT 41 YS2-15o07.q1k vc_2 398 358 2105 2145 C 41 100.00 398 reject_low 3 ALIGNMENT 0 YS2-15o07.q1k vc_3 357 62 2513 2512 C 296 0.00 398 reject_low 4 ALIGNMENT 41 YS2-15o07.q1k vc_1 398 358 2472 2512 C 41 100.00 398 reject_low 2 ALIGNMENT 0 YS2-15o07.q1k vc_5 359 62 5064 5063 C 298 0.00 398 reject_low 6 ALIGNMENT 39 YS2-15o07.q1k vc_5 398 360 5025 5063 C 39 100.00 398 reject_low 6 ALIGNMENT 0 YS2-15o07.q1k vc_7 62 360 13525 13524 F 299 0.00 398 reject_low 7 ALIGNMENT 0 YS2-15o07.q1k vc_1 357 62 2513 2512 C 296 0.00 398 reject_low 2 ALIGNMENT 0 YS2-15o07.q1k chr07 398 358 792403 792402 C 41 0.00 398 accept_chi 1 ALIGNMENT 41 YS2-15o07.q1k vc_4 358 398 5831 5871 F 41 100.00 398 reject_low 5 ALIGNMENT 0 YS2-15o07.p1k chr07 347 365 792720 792719 F 19 0.00 365 accept_chi 0 ALIGNMENT 36 YS2-15o07.q1k vc_5 395 360 1 36 C 36 100.00 398 reject_low 8 ALIGNMENT 303 YS2-15o07.q1k chr07 357 40 792402 792719 C 318 100.00 398 accept_chi 1 ALIGNMENT 38 YS2-15o07.q1k vc_7 361 398 13525 13562 F 38 100.00 398 reject_low 7 ALIGNMENT 0 YS2-15o07.q1k vc_2 357 62 2146 2145 C 296 0.00 398 reject_low 3 ALIGNMENT 0 YS2-15o07.q1k vc_4 62 357 5831 5830 F 296 0.00 398 reject_low 5 ALIGNMENT 304 YS2-15o07.p1k chr07 28 346 792402 792720 F 319 100.00 365 accept_chi 0 ALIGNMENT 41 YS2-15o07.q1k vc_3 398 358 2472 2512 C 41 100.00 398 reject_low 4 ALIGNMENT 0 YS2-15o07.q1k vc_5 359 62 37 36 C 298 0.00 398 reject_low 8 ALIGNMENT 0 YS2-15o08.p1k chr09 933 742 24296 24295 C 192 0.00 1262 reject_low 2 ALIGNMENT 404 YS2-15o08.p1k chr09 741 43 24295 24993 C 699 86.12 1262 reject_low 2 ALIGNMENT 1001 YS2-15o08.q1k chr08 1209 38 552949 554139 C 1172 96.33 1300 accept 0 ALIGNMENT 1019 YS2-15o08.p1k chr08 38 1196 542021 543187 F 1159 96.72 1262 accept 0 ALIGNMENT 630 YS2-15o08.q1k chr01 1209 119 226301 227412 C 1091 87.53 1300 reject_low 1 ALIGNMENT 1028 YS2-15o08.p1k chr01 38 1196 221410 222576 F 1159 96.98 1262 reject_low 1 ALIGNMENT 239 YS2-15o08.q1k chr02 684 1121 429552 429998 F 438 86.07 1300 reject_low 4 ALIGNMENT 302 YS2-15o08.p1k chr15 746 43 29714 30414 C 704 81.53 1262 reject_low 3 ALIGNMENT 27 YS2-15o08.q1k chr01 107 38 227408 227477 C 70 84.29 1300 reject_low 1 ALIGNMENT 0 YS2-15o08.q1k chr02 62 683 429552 429551 F 622 0.00 1300 reject_low 4 ALIGNMENT 0 YS2-15o08.q1k chr02 62 671 427690 427689 F 610 0.00 1300 reject_low 5 ALIGNMENT 0 YS2-15o08.q1k chr01 118 108 227413 227407 C 11 0.00 1300 reject_low 1 ALIGNMENT 215 YS2-15o08.q1k chr02 672 1086 427690 428109 F 415 84.58 1300 reject_low 5 ALIGNMENT 0 YS2-15o08.p1k chr15 933 747 29715 29714 C 187 0.00 1262 reject_low 3 ALIGNMENT 0 YS2-15o09.p1k chrm 901 410 57823 57822 C 492 0.00 1303 reject_low 27 ALIGNMENT 0 YS2-15o09.p1k chrm 901 417 77055 77054 C 485 0.00 1303 reject_low 22 ALIGNMENT 0 YS2-15o09.q1k vc_4 915 62 5813 5812 C 854 0.00 1233 reject_low 9 ALIGNMENT 0 YS2-15o09.q1k vc_7 915 62 2728 2727 C 854 0.00 1233 reject_low 3 ALIGNMENT 0 YS2-15o09.p1k chrm 371 62 55463 55462 C 310 0.00 1303 reject_low 26 ALIGNMENT 0 YS2-15o09.p1k chrm 62 708 24867 24866 F 647 0.00 1303 reject_low 32 ALIGNMENT 0 YS2-15o09.q1k vc_4 915 62 1535 1534 C 854 0.00 1233 reject_low 20 ALIGNMENT 39 YS2-15o09.q1k vc_5 916 878 5025 5063 C 39 100.00 1233 reject_low 31 ALIGNMENT 21 YS2-15o09.p1k chrm 709 751 24867 24912 F 43 86.05 1303 reject_low 32 ALIGNMENT 0 YS2-15o09.p1k vc_4 62 893 5871 5870 F 832 0.00 1303 reject_low 8 ALIGNMENT 0 YS2-15o09.q1k vc_1 875 62 2513 2512 C 814 0.00 1233 reject_low 23 ALIGNMENT 0 YS2-15o09.q1k vc_4 62 915 126 125 F 854 0.00 1233 reject_low 13 ALIGNMENT 226 YS2-15o09.p1k vc_1 1302 894 1688 2105 C 409 87.04 1303 reject_low 4 ALIGNMENT 0 YS2-15o09.p1k vc_1 893 62 2473 2472 C 832 0.00 1303 reject_low 36 ALIGNMENT 0 YS2-15o09.q1k chrm 502 62 84800 84799 C 441 0.00 1233 reject_low 16 ALIGNMENT 209 YS2-15o09.p1k vc_4 894 1225 5871 6207 F 332 88.86 1303 reject_low 8 ALIGNMENT 0 YS2-15o09.p1k vc_2 36 901 2145 2144 F 866 0.00 1303 reject_low 18 ALIGNMENT 0 YS2-15o09.p1k vc_3 893 62 2473 2472 C 832 0.00 1303 reject_low 37 ALIGNMENT 226 YS2-15o09.p1k vc_2 1302 894 1688 2105 C 409 87.04 1303 reject_low 5 ALIGNMENT 0 YS2-15o09.p1k chrm 62 709 12356 12355 F 648 0.00 1303 reject_low 14 ALIGNMENT 0 YS2-15o09.q1k chrm 541 844 77098 77097 F 304 0.00 1233 reject_low 21 ALIGNMENT 20 YS2-15o09.p1k vc_2 15 35 2125 2145 F 21 95.24 1303 reject_low 18 ALIGNMENT 0 YS2-15o09.q1k vc_5 877 62 37 36 C 816 0.00 1233 reject_low 35 ALIGNMENT 0 YS2-15o09.q1k vc_1 62 915 2531 2530 F 854 0.00 1233 reject_low 10 ALIGNMENT 171 YS2-15o09.q1k vc_4 1192 916 5531 5812 C 277 88.09 1233 reject_low 9 ALIGNMENT 0 YS2-15o09.q1k chrm 160 62 24913 24912 C 99 0.00 1233 reject_low 14 ALIGNMENT 0 YS2-15o09.p1k chrm 745 712 24565 24565 C 34 0.00 1303 accept_chi 1 ALIGNMENT 0 YS2-15o09.p1k chrm 92 62 25185 25184 C 31 0.00 1303 accept_chi 1 ALIGNMENT 0 YS2-15o09.p1k chrm 371 62 77099 77098 C 310 0.00 1303 reject_low 22 ALIGNMENT 26 YS2-15o09.p1k vc_1 924 894 2441 2472 C 31 96.77 1303 reject_low 36 ALIGNMENT 0 YS2-15o09.p1k vc_7 62 893 100 99 F 832 0.00 1303 reject_low 3 ALIGNMENT 20 YS2-15o09.p1k vc_1 15 35 2492 2512 F 21 95.24 1303 reject_low 17 ALIGNMENT 0 YS2-15o09.q1k chrm 820 844 25184 25183 F 25 0.00 1233 accept_chi 0 ALIGNMENT 35 YS2-15o09.p1k chrm 416 372 77054 77098 C 45 93.33 1303 reject_low 22 ALIGNMENT 170 YS2-15o09.q1k vc_1 916 1192 2531 2810 F 277 87.73 1233 reject_low 10 ALIGNMENT 38 YS2-15o09.q1k vc_7 879 916 13525 13562 F 38 100.00 1233 reject_low 34 ALIGNMENT 0 YS2-15o09.q1k vc_3 62 915 2531 2530 F 854 0.00 1233 reject_low 12 ALIGNMENT 30 YS2-15o09.q1k chrm 540 503 84762 84799 C 38 97.37 1233 reject_low 16 ALIGNMENT 20 YS2-15o09.p1k vc_3 15 35 2492 2512 F 21 95.24 1303 reject_low 19 ALIGNMENT 226 YS2-15o09.p1k vc_7 894 1302 100 517 F 409 87.04 1303 reject_low 3 ALIGNMENT 30 YS2-15o09.p1k chrm 409 372 55425 55462 C 38 97.37 1303 reject_low 26 ALIGNMENT 0 YS2-15o09.p1k vc_1 36 901 2512 2511 F 866 0.00 1303 reject_low 17 ALIGNMENT 0 YS2-15o09.q1k chrm 844 541 72793 72792 C 304 0.00 1233 reject_low 28 ALIGNMENT 0 YS2-15o09.p1k vc_3 893 62 2106 2105 C 832 0.00 1303 reject_low 6 ALIGNMENT 0 YS2-15o09.q1k vc_3 875 62 2513 2512 C 814 0.00 1233 reject_low 25 ALIGNMENT 30 YS2-15o09.p1k chrm 372 409 72792 72829 F 38 97.37 1303 reject_low 16 ALIGNMENT 41 YS2-15o09.q1k vc_2 916 876 2105 2145 C 41 100.00 1233 reject_low 24 ALIGNMENT 0 YS2-15o09.p1k chrm 901 410 55426 55425 C 492 0.00 1303 reject_low 26 ALIGNMENT 170 YS2-15o09.q1k vc_2 916 1192 2164 2443 F 277 87.73 1233 reject_low 11 ALIGNMENT 0 YS2-15o09.p1k vc_2 893 62 2106 2105 C 832 0.00 1303 reject_low 5 ALIGNMENT 112 YS2-15o09.p1k chrm 877 746 24433 24564 C 132 100.00 1303 accept_chi 1 ALIGNMENT 226 YS2-15o09.p1k vc_5 1302 894 4608 5025 C 409 87.04 1303 reject_low 2 ALIGNMENT 0 YS2-15o09.q1k chrm 844 204 24868 24867 C 641 0.00 1233 reject_low 14 ALIGNMENT 0 YS2-15o09.q1k vc_2 62 915 2164 2163 F 854 0.00 1233 reject_low 11 ALIGNMENT 30 YS2-15o09.p1k chrm 372 409 84762 84799 F 38 97.37 1303 reject_low 29 ALIGNMENT 38 YS2-15o09.q1k vc_7 879 916 63 100 F 38 100.00 1233 reject_low 33 ALIGNMENT 0 YS2-15o09.p1k chrm 410 901 72829 72828 F 492 0.00 1303 reject_low 16 ALIGNMENT 0 YS2-15o09.p1k vc_7 62 893 13562 13561 F 832 0.00 1303 reject_low 7 ALIGNMENT 41 YS2-15o09.q1k vc_1 916 876 2472 2512 C 41 100.00 1233 reject_low 23 ALIGNMENT 0 YS2-15o09.q1k vc_5 877 62 5064 5063 C 816 0.00 1233 reject_low 31 ALIGNMENT 0 YS2-15o09.q1k chrm 62 495 77054 77053 F 434 0.00 1233 reject_low 21 ALIGNMENT 20 YS2-15o09.p1k vc_4 35 15 5831 5851 C 21 95.24 1303 reject_low 13 ALIGNMENT 0 YS2-15o09.p1k chrm 62 371 72792 72791 F 310 0.00 1303 reject_low 16 ALIGNMENT 112 YS2-15o09.q1k chrm 35 166 24433 24564 F 132 100.00 1233 accept_chi 0 ALIGNMENT 0 YS2-15o09.q1k chrm 844 541 84763 84762 C 304 0.00 1233 reject_low 16 ALIGNMENT 41 YS2-15o09.q1k vc_3 916 876 2472 2512 C 41 100.00 1233 reject_low 25 ALIGNMENT 0 YS2-15o09.p1k vc_3 36 901 2512 2511 F 866 0.00 1303 reject_low 19 ALIGNMENT 0 YS2-15o09.q1k vc_4 62 875 5831 5830 F 814 0.00 1233 reject_low 15 ALIGNMENT 26 YS2-15o09.p1k vc_3 924 894 2441 2472 C 31 96.77 1303 reject_low 37 ALIGNMENT 170 YS2-15o09.q1k vc_7 1192 916 2448 2727 C 277 88.09 1233 reject_low 3 ALIGNMENT 0 YS2-15o09.p1k vc_1 893 62 2106 2105 C 832 0.00 1303 reject_low 4 ALIGNMENT 170 YS2-15o09.q1k vc_3 916 1192 2531 2810 F 277 87.73 1233 reject_low 12 ALIGNMENT 170 YS2-15o09.q1k vc_5 916 1192 2398 2677 F 277 87.73 1233 reject_low 2 ALIGNMENT 0 YS2-15o09.p1k chrm 752 901 24912 24911 F 150 0.00 1303 reject_low 32 ALIGNMENT 0 YS2-15o09.q1k chrm 502 62 72830 72829 C 441 0.00 1233 reject_low 28 ALIGNMENT 30 YS2-15o09.q1k vc_7 1192 1136 5103 5162 C 57 85.96 1233 reject_low 30 ALIGNMENT 41 YS2-15o09.p1k chrm 710 755 12356 12402 F 46 97.83 1303 reject_low 14 ALIGNMENT 0 YS2-15o09.q1k vc_4 917 916 5872 6353 F 0 0.00 1233 reject_low 15 ALIGNMENT 0 YS2-15o09.q1k vc_7 62 878 63 62 F 817 0.00 1233 reject_low 33 ALIGNMENT 0 YS2-15o09.p1k chrm 901 878 24434 24433 C 24 0.00 1303 accept_chi 1 ALIGNMENT 0 YS2-15o09.q1k chrm 167 200 24565 24565 F 34 0.00 1233 accept_chi 0 ALIGNMENT 520 YS2-15o09.p1k chrm 711 93 24566 25184 C 619 99.35 1303 accept_chi 1 ALIGNMENT 30 YS2-15o09.q1k chrm 540 503 72792 72829 C 38 97.37 1233 reject_low 28 ALIGNMENT 57 YS2-15o09.q1k vc_4 1003 916 1446 1534 C 88 88.64 1233 reject_low 20 ALIGNMENT 30 YS2-15o09.p1k chrm 409 372 57822 57859 C 38 97.37 1303 reject_low 27 ALIGNMENT 0 YS2-15o09.p1k chrm 371 62 57860 57859 C 310 0.00 1303 reject_low 27 ALIGNMENT 0 YS2-15o09.p1k chrm 410 901 84799 84798 F 492 0.00 1303 reject_low 29 ALIGNMENT 0 YS2-15o09.p1k chrm 62 371 84762 84761 F 310 0.00 1303 reject_low 29 ALIGNMENT 0 YS2-15o09.q1k vc_5 62 915 2398 2397 F 854 0.00 1233 reject_low 2 ALIGNMENT 36 YS2-15o09.q1k vc_5 913 878 1 36 C 36 100.00 1233 reject_low 35 ALIGNMENT 0 YS2-15o09.q1k vc_7 62 878 13525 13524 F 817 0.00 1233 reject_low 34 ALIGNMENT 35 YS2-15o09.q1k chrm 496 540 77054 77098 F 45 93.33 1233 reject_low 21 ALIGNMENT 0 YS2-15o09.p1k vc_4 901 36 5832 5831 C 866 0.00 1303 reject_low 13 ALIGNMENT 0 YS2-15o09.q1k vc_2 875 62 2146 2145 C 814 0.00 1233 reject_low 24 ALIGNMENT 114 YS2-15o09.q1k vc_4 916 1076 6353 6514 F 161 90.06 1233|1,0 reject_low 15 ALIGNMENT 114 YS2-15o09.q1k vc_4 916 1076 126 287 F 161 90.06 1233 reject_low 13 ALIGNMENT 21 YS2-15o09.q1k chrm 203 161 24867 24912 C 43 86.05 1233 reject_low 14 ALIGNMENT 0 YS2-15o09.p1k chrm 756 901 12402 12401 F 146 0.00 1303 reject_low 14 ALIGNMENT 0 YS2-15o09.q1k vc_7 1135 62 5163 5162 C 1074 0.00 1233 reject_low 30 ALIGNMENT 226 YS2-15o09.p1k vc_3 1302 894 1688 2105 C 409 87.04 1303 reject_low 6 ALIGNMENT 41 YS2-15o09.q1k vc_4 876 916 5831 5871 F 41 100.00 1233 reject_low 15 ALIGNMENT 0 YS2-15o09.p1k vc_5 893 62 5026 5025 C 832 0.00 1303 reject_low 2 ALIGNMENT 520 YS2-15o09.q1k chrm 201 819 24566 25184 F 619 99.35 1233 accept_chi 0 ALIGNMENT 226 YS2-15o09.p1k vc_7 894 1302 13562 13979 F 409 87.04 1303 reject_low 7 ALIGNMENT 38 YS2-15o10.q1k vc_7 220 257 13525 13562 F 38 100.00 257 reject_low 7 ALIGNMENT 41 YS2-15o10.q1k vc_4 217 257 5831 5871 F 41 100.00 257 reject_low 5 ALIGNMENT 0 YS2-15o10.q1k vc_4 62 216 5831 5830 F 155 0.00 257 reject_low 5 ALIGNMENT 0 YS2-15o10.q1k vc_1 216 62 2513 2512 C 155 0.00 257 reject_low 3 ALIGNMENT 41 YS2-15o10.q1k vc_3 257 217 2472 2512 C 41 100.00 257 reject_low 4 ALIGNMENT 134 YS2-15o10.p1k chr12 208 34 466827 467007 C 175 94.29 227 accept 0 ALIGNMENT 36 YS2-15o10.q1k vc_5 254 219 1 36 C 36 100.00 257 reject_low 8 ALIGNMENT 41 YS2-15o10.q1k vc_1 257 217 2472 2512 C 41 100.00 257 reject_low 3 ALIGNMENT 0 YS2-15o10.q1k vc_5 218 62 5064 5063 C 157 0.00 257 reject_low 6 ALIGNMENT 0 YS2-15o10.q1k chr12 217 257 467013 467012 F 41 0.00 257 reject_low 1 ALIGNMENT 0 YS2-15o10.p1k chr12 227 209 466828 466827 C 19 0.00 227 accept 0 ALIGNMENT 39 YS2-15o10.q1k vc_5 257 219 5025 5063 C 39 100.00 257 reject_low 6 ALIGNMENT 0 YS2-15o10.q1k vc_5 218 62 37 36 C 157 0.00 257 reject_low 8 ALIGNMENT 143 YS2-15o10.q1k chr12 38 216 457690 457876 F 179 94.97 257 accept 0 ALIGNMENT 0 YS2-15o10.q1k vc_3 216 62 2513 2512 C 155 0.00 257 reject_low 4 ALIGNMENT 0 YS2-15o10.q1k vc_7 62 219 13525 13524 F 158 0.00 257 reject_low 7 ALIGNMENT 0 YS2-15o10.p1k chr12 227 209 457691 457690 C 19 0.00 227 reject_low 2 ALIGNMENT 143 YS2-15o10.q1k chr12 38 216 466827 467013 F 179 94.97 257 reject_low 1 ALIGNMENT 0 YS2-15o10.q1k chr12 217 257 457876 457875 F 41 0.00 257 accept 0 ALIGNMENT 134 YS2-15o10.p1k chr12 208 34 457690 457870 C 175 94.29 227 reject_low 2 ALIGNMENT 959 YS2-15o11.p1k chr12 1166 29 317237 318383 C 1138 96.13 1168 accept 0 ALIGNMENT 993 YS2-15o11.q1k chr12 39 1186 314145 315299 F 1148 96.43 1200 accept 0 ALIGNMENT 40 YS2-15o13.q1k vc_3 462 423 2472 2511 C 40 100.00 462 reject_low 4 ALIGNMENT 40 YS2-15o13.q1k vc_2 462 423 2105 2144 C 40 100.00 462 reject_low 3 ALIGNMENT 0 YS2-15o13.p1k chr13 432 415 307511 307510 C 18 0.00 432 accept_chi 1 ALIGNMENT 0 YS2-15o13.q1k vc_5 423 62 37 36 C 362 0.00 462 reject_low 8 ALIGNMENT 40 YS2-15o13.q1k vc_4 423 462 5832 5871 F 40 100.00 462 reject_low 5 ALIGNMENT 370 YS2-15o13.q1k chr13 36 427 307510 307901 F 392 98.72 462 accept_chi 0 ALIGNMENT 359 YS2-15o13.p1k chr13 414 29 307510 307897 C 386 98.45 432 accept_chi 1 ALIGNMENT 0 YS2-15o13.q1k vc_2 422 62 2145 2144 C 361 0.00 462 reject_low 3 ALIGNMENT 38 YS2-15o13.q1k vc_7 425 462 13525 13562 F 38 100.00 462 reject_low 7 ALIGNMENT 36 YS2-15o13.q1k vc_5 459 424 1 36 C 36 100.00 462 reject_low 8 ALIGNMENT 0 YS2-15o13.q1k chr13 428 462 307901 307900 F 35 0.00 462 accept_chi 0 ALIGNMENT 0 YS2-15o13.q1k vc_1 422 62 2512 2511 C 361 0.00 462 reject_low 2 ALIGNMENT 0 YS2-15o13.q1k vc_7 62 424 13525 13524 F 363 0.00 462 reject_low 7 ALIGNMENT 39 YS2-15o13.q1k vc_5 462 424 5025 5063 C 39 100.00 462 reject_low 6 ALIGNMENT 0 YS2-15o13.q1k vc_5 423 62 5064 5063 C 362 0.00 462 reject_low 6 ALIGNMENT 0 YS2-15o13.q1k vc_3 422 62 2512 2511 C 361 0.00 462 reject_low 4 ALIGNMENT 40 YS2-15o13.q1k vc_1 462 423 2472 2511 C 40 100.00 462 reject_low 2 ALIGNMENT 0 YS2-15o13.q1k vc_4 62 422 5832 5831 F 361 0.00 462 reject_low 5 ALIGNMENT 36 YS2-15o14.q1k vc_5 760 725 1 36 C 36 100.00 763 reject_low 6 ALIGNMENT 39 YS2-15o14.q1k vc_5 763 725 5025 5063 C 39 100.00 763 reject_low 4 ALIGNMENT 0 YS2-15o14.q1k vc_5 724 62 37 36 C 663 0.00 763 reject_low 6 ALIGNMENT 0 YS2-15o14.q1k vc_3 722 62 2513 2512 C 661 0.00 763 reject_low 2 ALIGNMENT 0 YS2-15o14.q1k chr12 724 763 520175 520174 F 40 0.00 763 accept 0 ALIGNMENT 643 YS2-15o14.q1k chr12 24 723 519475 520175 F 700 99.14 763 accept 0 ALIGNMENT 41 YS2-15o14.q1k vc_4 723 763 5831 5871 F 41 100.00 763 reject_low 3 ALIGNMENT 38 YS2-15o14.q1k vc_7 726 763 13525 13562 F 38 100.00 763 reject_low 5 ALIGNMENT 0 YS2-15o14.q1k vc_1 722 62 2513 2512 C 661 0.00 763 reject_low 1 ALIGNMENT 641 YS2-15o14.p1k chr12 732 41 519481 520172 C 692 99.42 733 accept 0 ALIGNMENT 0 YS2-15o14.q1k vc_5 724 62 5064 5063 C 663 0.00 763 reject_low 4 ALIGNMENT 0 YS2-15o14.q1k vc_7 62 725 13525 13524 F 664 0.00 763 reject_low 5 ALIGNMENT 41 YS2-15o14.q1k vc_3 763 723 2472 2512 C 41 100.00 763 reject_low 2 ALIGNMENT 41 YS2-15o14.q1k vc_1 763 723 2472 2512 C 41 100.00 763 reject_low 1 ALIGNMENT 0 YS2-15o14.q1k vc_4 62 722 5831 5830 F 661 0.00 763 reject_low 3 ALIGNMENT 957 YS2-15o15.q1k chr16 1196 40 624524 625688 C 1157 95.42 1228 accept 0 ALIGNMENT 809 YS2-15o15.p1k chr16 32 1082 621433 622472 F 1051 93.63 1179 accept 0 ALIGNMENT 0 YS2-15o16.q1k vc_4 62 182 5831 5830 F 121 0.00 223 reject_low 4 ALIGNMENT 39 YS2-15o16.q1k vc_5 223 185 5025 5063 C 39 100.00 223 reject_low 5 ALIGNMENT 0 YS2-15o16.q1k vc_5 184 62 5064 5063 C 123 0.00 223 reject_low 5 ALIGNMENT 41 YS2-15o16.q1k vc_4 183 223 5831 5871 F 41 100.00 223 reject_low 4 ALIGNMENT 0 YS2-15o16.q1k vc_2 182 62 2146 2145 C 121 0.00 223 reject_low 2 ALIGNMENT 36 YS2-15o16.q1k vc_5 220 185 1 36 C 36 100.00 223 reject_low 7 ALIGNMENT 0 YS2-15o16.q1k vc_1 182 62 2513 2512 C 121 0.00 223 reject_low 1 ALIGNMENT 131 YS2-15o16.q1k chr04 182 36 385913 386058 C 147 97.28 223 accept 0 ALIGNMENT 41 YS2-15o16.q1k vc_1 223 183 2472 2512 C 41 100.00 223 reject_low 1 ALIGNMENT 38 YS2-15o16.q1k vc_7 186 223 13525 13562 F 38 100.00 223 reject_low 6 ALIGNMENT 0 YS2-15o16.q1k vc_3 182 62 2513 2512 C 121 0.00 223 reject_low 3 ALIGNMENT 0 YS2-15o16.q1k vc_7 62 185 13525 13524 F 124 0.00 223 reject_low 6 ALIGNMENT 0 YS2-15o16.q1k vc_5 184 62 37 36 C 123 0.00 223 reject_low 7 ALIGNMENT 41 YS2-15o16.q1k vc_3 223 183 2472 2512 C 41 100.00 223 reject_low 3 ALIGNMENT 41 YS2-15o16.q1k vc_2 223 183 2105 2145 C 41 100.00 223 reject_low 2 ALIGNMENT 0 YS2-15o16.q1k chr04 223 183 385914 385913 C 41 0.00 223 accept 0 ALIGNMENT 42 YS2-15o17.q1k vc_1 216 175 2472 2513 C 42 100.00 216 reject_low 1 ALIGNMENT 39 YS2-15o17.q1k vc_5 216 178 5025 5063 C 39 100.00 216 reject_low 5 ALIGNMENT 36 YS2-15o17.q1k vc_5 213 178 1 36 C 36 100.00 216 reject_low 7 ALIGNMENT 42 YS2-15o17.q1k vc_2 216 175 2105 2146 C 42 100.00 216 reject_low 2 ALIGNMENT 0 YS2-15o17.q1k vc_7 62 178 13525 13524 F 117 0.00 216 reject_low 6 ALIGNMENT 38 YS2-15o17.q1k vc_7 179 216 13525 13562 F 38 100.00 216 reject_low 6 ALIGNMENT 138 YS2-15o17.q1k chr04 37 176 960972 961111 F 140 100.00 216 accept 0 ALIGNMENT 0 YS2-15o17.q1k vc_3 174 62 2514 2513 C 113 0.00 216 reject_low 3 ALIGNMENT 0 YS2-15o17.q1k vc_4 62 174 5830 5829 F 113 0.00 216 reject_low 4 ALIGNMENT 42 YS2-15o17.q1k vc_4 175 216 5830 5871 F 42 100.00 216 reject_low 4 ALIGNMENT 0 YS2-15o17.q1k vc_2 174 62 2147 2146 C 113 0.00 216 reject_low 2 ALIGNMENT 0 YS2-15o17.q1k vc_5 177 62 37 36 C 116 0.00 216 reject_low 7 ALIGNMENT 0 YS2-15o17.q1k vc_1 174 62 2514 2513 C 113 0.00 216 reject_low 1 ALIGNMENT 0 YS2-15o17.q1k vc_5 177 62 5064 5063 C 116 0.00 216 reject_low 5 ALIGNMENT 0 YS2-15o17.q1k chr04 177 216 961111 961110 F 40 0.00 216 accept 0 ALIGNMENT 42 YS2-15o17.q1k vc_3 216 175 2472 2513 C 42 100.00 216 reject_low 3 ALIGNMENT 955 YS2-15o18.p1k chr04 1140 44 424088 425185 C 1097 96.44 1251 accept 0 ALIGNMENT 985 YS2-15o18.q1k chr04 136 1254 420345 421462 F 1119 97.05 1254 accept 0 ALIGNMENT 976 YS2-15o19.q1k chr04 30 1153 609686 610801 F 1124 96.80 1157 accept 0 ALIGNMENT 970 YS2-15o19.p1k chr04 1185 37 610687 611854 C 1149 96.17 1239 accept 0 ALIGNMENT 0 YS2-15o20.q1k chrm 781 826 57077 57076 F 46 0.00 1199 reject_low 5 ALIGNMENT 0 YS2-15o20.p1k chrm 655 848 30970 30969 F 194 0.00 1218 reject_low 4 ALIGNMENT 21 YS2-15o20.q1k chrm 743 714 46014 46043 C 30 93.33 1199 reject_low 18 ALIGNMENT 0 YS2-15o20.p1k chrm 62 615 30932 30931 F 554 0.00 1218 reject_low 4 ALIGNMENT 0 YS2-15o20.p1k chrm 497 62 57078 57077 C 436 0.00 1218 reject_low 6 ALIGNMENT 0 YS2-15o20.q1k chrm 62 718 52319 52318 F 657 0.00 1199 reject_low 11 ALIGNMENT 34 YS2-15o20.q1k chrm 836 732 48037 48143 C 105 82.86 1199 reject_low 8 ALIGNMENT 29 YS2-15o20.q1k chrm 783 663 50102 50222 C 121 79.34 1199 reject_low 7 ALIGNMENT 0 YS2-15o20.p1k chrm 455 62 4629 4628 C 394 0.00 1218 reject_low 13 ALIGNMENT 40 YS2-15o20.p1k chrm 459 557 72966 73061 F 99 84.85 1218 reject_low 10 ALIGNMENT 0 YS2-15o20.p1k chrm 550 848 69098 69097 F 299 0.00 1218 reject_low 21 ALIGNMENT 0 YS2-15o20.q1k chrm 206 62 52302 52301 C 145 0.00 1199 reject_low 8 ALIGNMENT 37 YS2-15o20.q1k chrm 731 813 47474 47551 F 83 85.54 1199 reject_low 6 ALIGNMENT 0 YS2-15o20.p1k chrm 62 496 35799 35798 F 435 0.00 1218 reject_low 9 ALIGNMENT 29 YS2-15o20.p1k chrm 503 557 77671 77723 F 55 87.27 1218 reject_low 22 ALIGNMENT 0 YS2-15o20.q1k chrm 623 62 30971 30970 C 562 0.00 1199 reject_low 3 ALIGNMENT 711 YS2-15o20.q1k chrm 35 1032 30345 31324 F 998 96.89 1199 accept 0 ALIGNMENT 33 YS2-15o20.q1k chrm 778 731 64513 64559 C 48 91.67 1199 reject_low 19 ALIGNMENT 0 YS2-15o20.p1k chrm 547 848 34976 34975 F 302 0.00 1218 reject_low 8 ALIGNMENT 0 YS2-15o20.q1k chrm 730 62 64560 64559 C 669 0.00 1199 reject_low 19 ALIGNMENT 0 YS2-15o20.q1k chrm 662 62 50223 50222 C 601 0.00 1199 reject_low 7 ALIGNMENT 0 YS2-15o20.p1k chrm 62 458 72966 72965 F 397 0.00 1218 reject_low 10 ALIGNMENT 0 YS2-15o20.p1k chrm 848 364 76788 76787 C 485 0.00 1218 reject_low 2 ALIGNMENT 0 YS2-15o20.q1k chrm 826 780 46311 46310 C 47 0.00 1199 reject_low 9 ALIGNMENT 33 YS2-15o20.q1k chrm 762 721 53838 53880 C 42 95.24 1199 reject_low 15 ALIGNMENT 24 YS2-15o20.q1k chrm 662 624 30932 30970 C 39 87.18 1199 reject_low 3 ALIGNMENT 0 YS2-15o20.q1k chrm 826 778 80501 80500 C 49 0.00 1199 reject_low 1 ALIGNMENT 0 YS2-15o20.q1k chrm 826 663 30933 30932 C 164 0.00 1199 reject_low 3 ALIGNMENT 35 YS2-15o20.q1k chrm 356 207 52152 52301 C 150 82.00 1199 reject_low 8 ALIGNMENT 0 YS2-15o20.p1k chrm 316 62 76834 76833 C 255 0.00 1218 reject_low 2 ALIGNMENT 0 YS2-15o20.q1k chrm 826 744 46015 46014 C 83 0.00 1199 reject_low 18 ALIGNMENT 0 YS2-15o20.p1k chrm 614 848 69551 69550 F 235 0.00 1218 reject_low 1 ALIGNMENT 44 YS2-15o20.p1k chrm 556 473 9480 9561 C 84 86.90 1218 reject_low 12 ALIGNMENT 0 YS2-15o20.p1k chrm 62 491 81391 81390 F 430 0.00 1218 reject_low 16 ALIGNMENT 0 YS2-15o20.p1k chrm 62 501 69052 69051 F 440 0.00 1218 reject_low 21 ALIGNMENT 0 YS2-15o20.p1k chrm 556 848 76645 76644 F 293 0.00 1218 reject_low 20 ALIGNMENT 32 YS2-15o20.p1k chrm 502 549 69052 69098 F 48 91.67 1218 reject_low 21 ALIGNMENT 0 YS2-15o20.p1k chrm 62 502 77671 77670 F 441 0.00 1218 reject_low 22 ALIGNMENT 28 YS2-15o20.q1k chrm 719 829 52319 52428 F 111 80.18 1199 reject_low 11 ALIGNMENT 0 YS2-15o20.p1k chrm 556 848 81454 81453 F 293 0.00 1218 reject_low 16 ALIGNMENT 713 YS2-15o20.p1k chrm 1208 29 30358 31552 C 1180 93.64 1218 accept 0 ALIGNMENT 0 YS2-15o20.p1k chrm 560 848 35858 35857 F 289 0.00 1218 reject_low 9 ALIGNMENT 38 YS2-15o20.p1k chrm 577 492 71185 71267 C 86 84.88 1218 reject_low 5 ALIGNMENT 47 YS2-15o20.p1k chrm 489 613 69430 69551 F 125 84.80 1218 reject_low 1 ALIGNMENT 0 YS2-15o20.p1k chrm 472 62 9562 9561 C 411 0.00 1218 reject_low 12 ALIGNMENT 0 YS2-15o20.q1k chrm 720 62 53881 53880 C 659 0.00 1199 reject_low 15 ALIGNMENT 33 YS2-15o20.q1k chrm 780 730 52766 52815 C 51 90.20 1199 reject_low 17 ALIGNMENT 0 YS2-15o20.p1k chrm 558 848 77723 77722 F 291 0.00 1218 reject_low 22 ALIGNMENT 0 YS2-15o20.q1k chrm 729 62 52816 52815 C 668 0.00 1199 reject_low 17 ALIGNMENT 0 YS2-15o20.p1k chrm 62 494 34926 34925 F 433 0.00 1218 reject_low 8 ALIGNMENT 0 YS2-15o20.q1k chrm 62 729 57028 57027 F 668 0.00 1199 reject_low 5 ALIGNMENT 36 YS2-15o20.q1k chrm 730 780 57028 57077 F 51 92.16 1199 reject_low 5 ALIGNMENT 26 YS2-15o20.p1k chrm 363 317 76787 76833 C 47 85.11 1218 reject_low 2 ALIGNMENT 28 YS2-15o20.p1k chrm 548 456 4535 4628 C 93 80.65 1218 reject_low 13 ALIGNMENT 0 YS2-15o20.p1k chrm 563 848 9091 9090 F 286 0.00 1218 reject_low 14 ALIGNMENT 0 YS2-15o20.p1k chrm 491 62 71268 71267 C 430 0.00 1218 reject_low 5 ALIGNMENT 0 YS2-15o20.q1k chrm 826 781 52767 52766 C 46 0.00 1199 reject_low 17 ALIGNMENT 35 YS2-15o20.p1k chrm 495 546 34926 34976 F 52 90.38 1218 reject_low 8 ALIGNMENT 40 YS2-15o20.p1k chrm 497 559 35799 35858 F 63 90.48 1218 reject_low 9 ALIGNMENT 0 YS2-15o20.q1k chrm 826 784 50103 50102 C 43 0.00 1199 reject_low 7 ALIGNMENT 0 YS2-15o20.p1k chrm 848 549 4536 4535 C 300 0.00 1218 reject_low 13 ALIGNMENT 0 YS2-15o20.p1k chrm 848 549 57029 57028 C 300 0.00 1218 reject_low 6 ALIGNMENT 24 YS2-15o20.p1k chrm 616 654 30932 30970 F 39 87.18 1218 reject_low 4 ALIGNMENT 0 YS2-15o20.p1k chrm 848 557 9481 9480 C 292 0.00 1218 reject_low 12 ALIGNMENT 0 YS2-15o20.q1k chrm 731 62 46357 46356 C 670 0.00 1199 reject_low 9 ALIGNMENT 0 YS2-15o20.p1k chrm 62 493 76585 76584 F 432 0.00 1218 reject_low 20 ALIGNMENT 0 YS2-15o20.p1k chrm 62 483 9011 9010 F 422 0.00 1218 reject_low 14 ALIGNMENT 0 YS2-15o20.q1k chrm 826 779 64514 64513 C 48 0.00 1199 reject_low 19 ALIGNMENT 0 YS2-15o20.p1k chrm 62 488 69430 69429 F 427 0.00 1218 reject_low 1 ALIGNMENT 0 YS2-15o20.q1k chrm 731 357 48144 52151 C 375 0.00 1199 reject_low 8 ALIGNMENT 0 YS2-15o20.q1k chrm 712 62 80564 80563 C 651 0.00 1199 reject_low 1 ALIGNMENT 0 YS2-15o20.p1k chrm 558 848 73061 73060 F 291 0.00 1218 reject_low 10 ALIGNMENT 36 YS2-15o20.p1k chrm 548 498 57028 57077 C 51 92.16 1218 reject_low 6 ALIGNMENT 39 YS2-15o20.p1k chrm 494 555 76585 76645 F 62 88.71 1218 reject_low 20 ALIGNMENT 0 YS2-15o20.q1k chrm 826 763 53839 53838 C 64 0.00 1199 reject_low 15 ALIGNMENT 0 YS2-15o20.q1k chrm 713 62 46044 46043 C 652 0.00 1199 reject_low 18 ALIGNMENT 40 YS2-15o20.p1k chrm 492 555 81391 81454 F 64 89.06 1218 reject_low 16 ALIGNMENT 0 YS2-15o20.q1k chrm 62 730 47474 47473 F 669 0.00 1199 reject_low 6 ALIGNMENT 36 YS2-15o20.q1k chrm 779 732 46310 46356 C 48 93.75 1199 reject_low 9 ALIGNMENT 0 YS2-15o20.p1k chrm 848 578 71186 71185 C 271 0.00 1218 reject_low 5 ALIGNMENT 41 YS2-15o20.q1k chrm 777 713 80500 80563 C 65 89.23 1199 reject_low 1 ALIGNMENT 39 YS2-15o20.p1k chrm 484 562 9011 9091 F 79 86.08 1218 reject_low 14 ALIGNMENT 927 YS2-15o21.p1k chr15 37 1064 865196 866215 F 1028 98.15 1175 accept 0 ALIGNMENT 997 YS2-15o21.q1k chr15 1193 48 868518 869665 C 1146 96.68 1196 accept 0 ALIGNMENT 956 YS2-15o22.q1k chr07 45 1116 903702 904762 F 1072 97.67 1211 accept 0 ALIGNMENT 127 YS2-15o22.p1k chr02 948 314 412713 413362 C 635 74.02 1131 reject_low 1 ALIGNMENT 0 YS2-15o22.p1k chr02 313 62 413363 413362 C 252 0.00 1131 reject_low 1 ALIGNMENT 961 YS2-15o22.p1k chr07 1097 44 907382 908436 C 1054 97.25 1131 accept 0 ALIGNMENT 38 YS2-15o23.q1k vc_7 182 219 13525 13562 F 38 100.00 219 reject_low 6 ALIGNMENT 41 YS2-15o23.q1k vc_3 219 179 2472 2512 C 41 100.00 219 reject_low 3 ALIGNMENT 133 YS2-15o23.q1k chr09 179 34 114783 114928 C 146 98.63 219 accept 0 ALIGNMENT 0 YS2-15o23.q1k vc_4 62 178 5831 5830 F 117 0.00 219 reject_low 4 ALIGNMENT 0 YS2-15o23.q1k vc_3 178 62 2513 2512 C 117 0.00 219 reject_low 3 ALIGNMENT 0 YS2-15o23.q1k vc_1 178 62 2513 2512 C 117 0.00 219 reject_low 1 ALIGNMENT 41 YS2-15o23.q1k vc_4 179 219 5831 5871 F 41 100.00 219 reject_low 4 ALIGNMENT 0 YS2-15o23.q1k chr09 219 180 114784 114783 C 40 0.00 219 accept 0 ALIGNMENT 37 YS2-15o23.q1k vc_5 216 177 1 40 C 40 97.50 219 reject_low 7 ALIGNMENT 40 YS2-15o23.q1k vc_5 219 177 5025 5067 C 43 97.67 219 reject_low 5 ALIGNMENT 0 YS2-15o23.q1k vc_2 178 62 2146 2145 C 117 0.00 219 reject_low 2 ALIGNMENT 41 YS2-15o23.q1k vc_1 219 179 2472 2512 C 41 100.00 219 reject_low 1 ALIGNMENT 0 YS2-15o23.q1k vc_5 176 62 41 40 C 115 0.00 219 reject_low 7 ALIGNMENT 0 YS2-15o23.q1k vc_5 176 62 5068 5067 C 115 0.00 219 reject_low 5 ALIGNMENT 41 YS2-15o23.q1k vc_2 219 179 2105 2145 C 41 100.00 219 reject_low 2 ALIGNMENT 0 YS2-15o23.q1k vc_7 62 181 13525 13524 F 120 0.00 219 reject_low 6 ALIGNMENT 959 YS2-15o24.p1k chr16 30 1122 196616 197698 F 1093 96.98 1134 accept 0 ALIGNMENT 929 YS2-15o24.q1k chr16 1112 32 201813 202887 C 1081 96.85 1128 accept 0 ALIGNMENT 1053 YS2-15p01.p1k chr08 32 1207 99217 100396 F 1176 97.02 1208 accept 0 ALIGNMENT 643 YS2-15p01.q1k chr08 830 55 103408 104168 C 776 96.39 1274 accept 0 ALIGNMENT 717 YS2-15p02.p1k scplasm1 995 30 993 1965 C 966 92.13 1227 accept 0 ALIGNMENT 39 YS2-15p02.p1k vc_7 1019 1107 112 196 F 89 84.27 1227 reject_low 1 ALIGNMENT 0 YS2-15p02.p1k vc_7 62 1018 112 111 F 957 0.00 1227 reject_low 1 ALIGNMENT 138 YS2-15p03.p1k chr15 644 37 22516 23123 C 608 75.33 1138 ambiguous_tel 2 ALIGNMENT 0 YS2-15p03.p1k chr15 837 645 22517 22516 C 193 0.00 1138 ambiguous_tel 2 ALIGNMENT 20 YS2-15p03.p1k chr10 624 598 24353 24379 C 27 92.59 1138 ambiguous_tel 5 ALIGNMENT 233 YS2-15p03.p1k chr07 636 29 1067228 1067836 C 608 80.43 1138 ambiguous_tel 1 ALIGNMENT 0 YS2-15p03.p1k chr10 837 288 17117 17116 C 550 0.00 1138 ambiguous_tel 4 ALIGNMENT 0 YS2-15p03.p1k chr09 837 637 16785 16784 C 201 0.00 1138 ambiguous_tel 3 ALIGNMENT 0 YS2-15p03.p1k chr07 837 637 1067229 1067228 C 201 0.00 1138 ambiguous_tel 1 ALIGNMENT 0 YS2-15p03.p1k chr10 837 625 24354 24353 C 213 0.00 1138 ambiguous_tel 5 ALIGNMENT 26 YS2-15p03.p1k chr10 203 152 24765 24816 C 52 84.62 1138 ambiguous_tel 5 ALIGNMENT 588 YS2-15p03.q1k chr07 32 689 1075274 1075931 F 658 97.57 1325 accept 0 ALIGNMENT 140 YS2-15p03.p1k chr09 636 37 16784 17383 C 600 75.67 1138 ambiguous_tel 3 ALIGNMENT 81 YS2-15p03.p1k chr10 287 37 17116 17366 C 251 78.09 1138 ambiguous_tel 4 ALIGNMENT 0 YS2-15p03.p1k chr10 151 62 24817 24816 C 90 0.00 1138 ambiguous_tel 5 ALIGNMENT 0 YS2-15p03.p1k chr10 597 204 24380 24764 C 394 0.00 1138 ambiguous_tel 5 ALIGNMENT 983 YS2-15p04.p1k chr15 1142 32 531225 532330 C 1111 97.57 1156 accept 0 ALIGNMENT 0 YS2-15p05.p1k chr12 232 214 457691 457690 C 19 0.00 232 accept 0 ALIGNMENT 137 YS2-15p05.p1k chr12 213 38 466827 467008 C 176 94.32 232 accept 1 ALIGNMENT 0 YS2-15p05.p1k chr12 232 214 466828 466827 C 19 0.00 232 accept 1 ALIGNMENT 137 YS2-15p05.p1k chr12 213 38 457690 457871 C 176 94.32 232 accept 0 ALIGNMENT 206 YS2-15p06.p1k chr02 35 244 413389 413598 F 210 100.00 263 accept 0 ALIGNMENT 0 YS2-15p06.p1k chr02 245 263 413598 413597 F 19 0.00 263 accept 0 ALIGNMENT 672 YS2-15p07.q1k chr13 774 31 160325 161068 C 744 97.18 1167 accept 0 ALIGNMENT 1073 YS2-15p07.p1k chr13 37 1278 156478 157719 F 1242 96.14 1287 accept 0 ALIGNMENT 0 YS2-15p08.p1k chr07 62 127 24548 24547 F 66 0.00 1277 reject_low 1 ALIGNMENT 264 YS2-15p08.p1k chr07 128 936 24548 25359 F 809 78.00 1277 reject_low 1 ALIGNMENT 1005 YS2-15p08.q1k chr06 42 1164 250482 251617 F 1123 96.79 1302 accept 0 ALIGNMENT 946 YS2-15p08.p1k chr06 1187 36 253352 254517 C 1152 94.53 1277 accept 0 ALIGNMENT 1062 YS2-15p09.p1k chr15 1266 37 63709 64946 C 1230 96.42 1314 accept 0 ALIGNMENT 0 YS2-15p10.q1k vc_5 570 62 37 36 C 509 0.00 609 reject_low 7 ALIGNMENT 0 YS2-15p10.q1k vc_5 570 62 5064 5063 C 509 0.00 609 reject_low 5 ALIGNMENT 42 YS2-15p10.q1k vc_3 609 567 2472 2514 C 43 100.00 609 reject_low 3 ALIGNMENT 39 YS2-15p10.q1k vc_5 609 571 5025 5063 C 39 100.00 609 reject_low 5 ALIGNMENT 525 YS2-15p10.q1k chr11 568 31 90512 91049 C 538 99.63 609 accept_chi 0 ALIGNMENT 0 YS2-15p10.p1k chr11 564 582 91049 91048 F 19 0.00 582 accept_chi 1 ALIGNMENT 0 YS2-15p10.q1k vc_1 566 62 2515 2514 C 505 0.00 609 reject_low 2 ALIGNMENT 42 YS2-15p10.q1k vc_4 567 609 5829 5871 F 43 100.00 609 reject_low 4 ALIGNMENT 38 YS2-15p10.q1k vc_7 572 609 13525 13562 F 38 100.00 609 reject_low 6 ALIGNMENT 0 YS2-15p10.q1k vc_3 566 62 2515 2514 C 505 0.00 609 reject_low 3 ALIGNMENT 42 YS2-15p10.q1k vc_1 609 567 2472 2514 C 43 100.00 609 reject_low 2 ALIGNMENT 36 YS2-15p10.q1k vc_5 606 571 1 36 C 36 100.00 609 reject_low 7 ALIGNMENT 516 YS2-15p10.p1k chr11 26 563 90512 91049 F 538 99.26 582 accept_chi 1 ALIGNMENT 0 YS2-15p10.q1k vc_4 62 566 5829 5828 F 505 0.00 609 reject_low 4 ALIGNMENT 0 YS2-15p10.q1k vc_7 62 571 13525 13524 F 510 0.00 609 reject_low 6 ALIGNMENT 0 YS2-15p10.q1k chr11 609 569 90513 90512 C 41 0.00 609 accept_chi 0 ALIGNMENT 990 YS2-15p11.p1k chr07 42 1177 581434 582572 F 1136 96.92 1192 accept 0 ALIGNMENT 403 YS2-15p13.p1k vc_2 606 1 1140 1749 C 606 89.60 641 reject_vc 4 ALIGNMENT 406 YS2-15p13.p1k vc_5 606 1 4060 4669 C 606 89.77 641 reject_vc 1 ALIGNMENT 691 YS2-15p13.q1k chr16 1010 41 667074 668027 C 970 92.27 1450 accept 0 ALIGNMENT 397 YS2-15p13.p1k vc_7 1 606 13918 14527 F 606 89.27 641 reject_vc 7 ALIGNMENT 406 YS2-15p13.p1k vc_6 1 606 3712 4321 F 606 89.77 641 reject_vc 2 ALIGNMENT 397 YS2-15p13.p1k vc_7 1 606 456 1065 F 606 89.27 641 reject_vc 6 ALIGNMENT 403 YS2-15p13.p1k vc_3 606 1 1140 1749 C 606 89.60 641 reject_vc 5 ALIGNMENT 403 YS2-15p13.p1k vc_1 606 1 1140 1749 C 606 89.60 641 reject_vc 3 ALIGNMENT 464 YS2-15p14.p1k chr09 37 594 19436 19996 F 558 95.16 616 ambiguous_tel 2 ALIGNMENT 0 YS2-15p14.p1k chr10 595 616 19976 19975 F 22 0.00 616 ambiguous_tel 3 ALIGNMENT 362 YS2-15p14.q1k chr09 848 61 273011 273781 C 788 84.14 1428 accept 0 ALIGNMENT 499 YS2-15p14.p1k chr15 37 594 25194 25751 F 558 97.13 616 ambiguous_tel 1 ALIGNMENT 0 YS2-15p14.p1k chr15 595 616 25751 25750 F 22 0.00 616 ambiguous_tel 1 ALIGNMENT 0 YS2-15p14.p1k chr09 595 616 19996 19995 F 22 0.00 616 ambiguous_tel 2 ALIGNMENT 420 YS2-15p14.p1k chr10 37 594 19418 19976 F 558 92.47 616 ambiguous_tel 3 ALIGNMENT 26 YS2-15p15.p1k chr07 309 336 338266 338293 F 28 100.00 354 reject_bad_break 0 ALIGNMENT 0 YS2-15p15.p1k chr07 337 354 338293 338292 F 18 0.00 354 reject_bad_break 0 ALIGNMENT 0 YS2-15p15.p1k chr07 285 308 338275 338265 F 24 0.00 354 reject_bad_break 0 ALIGNMENT 254 YS2-15p15.p1k chr07 25 284 338015 338274 F 260 100.00 354 reject_bad_break 0 ALIGNMENT 717 YS2-15p16.q1k chr14 25 826 591108 591902 F 802 97.76 1169 accept 0 ALIGNMENT 995 YS2-15p16.p1k chr14 1179 32 595737 596895 C 1148 96.69 1182 accept 0 ALIGNMENT 1004 YS2-15p17.p1k chr07 41 1253 298378 299574 F 1213 95.96 1275 accept 0 ALIGNMENT 926 YS2-15p18.p1k chr12 1215 33 436034 437210 C 1183 95.27 1248 accept_chi 0 ALIGNMENT 244 YS2-15p18.q1k chr05 794 45 183731 184469 C 750 79.33 1333 accept_chi 1 ALIGNMENT 251 YS2-15p19.p1k chr05 414 750 269414 269751 F 337 91.99 1250 reject_low 1 ALIGNMENT 992 YS2-15p19.p1k chr09 36 1202 255840 257008 F 1167 96.14 1250 accept 0 ALIGNMENT 0 YS2-15p19.p1k chr05 751 862 269751 269750 F 112 0.00 1250 reject_low 1 ALIGNMENT 0 YS2-15p19.p1k chr05 62 413 269414 269413 F 352 0.00 1250 reject_low 1 ALIGNMENT 858 YS2-15p19.q1k chr09 1063 33 256987 258005 C 1031 96.12 1179 accept 0 ALIGNMENT 0 YS2-15p20.p1k chr13 62 179 21960 21959 F 118 0.00 480 reject_low 2 ALIGNMENT 21 YS2-15p20.p1k chr07 179 213 307183 307217 F 35 94.29 480 reject_low 1 ALIGNMENT 388 YS2-15p20.p1k chr03 30 462 50172 50608 F 433 97.92 480 accept 0 ALIGNMENT 20 YS2-15p20.p1k chr13 180 213 21960 21993 F 34 94.12 480 reject_low 2 ALIGNMENT 0 YS2-15p20.p1k chr13 214 480 21993 21992 F 267 0.00 480 reject_low 2 ALIGNMENT 0 YS2-15p20.p1k chr03 463 480 50608 50607 F 18 0.00 480 accept 0 ALIGNMENT 0 YS2-15p20.p1k chr07 62 178 307183 307182 F 117 0.00 480 reject_low 1 ALIGNMENT 0 YS2-15p20.p1k chr07 214 480 307217 307216 F 267 0.00 480 reject_low 1 ALIGNMENT 0 YS2-15p21.p1k chr12 81 62 472583 472582 C 20 0.00 1156 reject_low 4 ALIGNMENT 858 YS2-15p21.p1k chr12 1058 82 467955 468930 C 977 97.65 1156 reject_low 1 ALIGNMENT 881 YS2-15p21.p1k chr12 1058 55 458818 459820 C 1004 97.71 1156 accept 0 ALIGNMENT 119 YS2-15p21.p1k chr12 200 82 482044 482162 C 119 100.00 1156 reject_low 5 ALIGNMENT 0 YS2-15p21.p1k chr12 81 62 482163 482162 C 20 0.00 1156 reject_low 5 ALIGNMENT 0 YS2-15p21.p1k chr12 81 62 485815 485814 C 20 0.00 1156 reject_low 6 ALIGNMENT 0 YS2-15p21.p1k chr12 848 201 485697 485696 C 648 0.00 1156 reject_low 6 ALIGNMENT 119 YS2-15p21.p1k chr12 200 82 472464 472582 C 119 100.00 1156 reject_low 4 ALIGNMENT 0 YS2-15p21.p1k chr06 62 459 31622 31621 F 398 0.00 1156 reject_low 3 ALIGNMENT 0 YS2-15p21.p1k chr12 81 62 468931 468930 C 20 0.00 1156 reject_low 1 ALIGNMENT 0 YS2-15p21.p1k chr12 848 201 489349 489348 C 648 0.00 1156 reject_low 2 ALIGNMENT 951 YS2-15p21.q1k chr12 42 1222 455300 456456 F 1181 94.92 1222 accept 0 ALIGNMENT 0 YS2-15p21.p1k chr12 848 201 472465 472464 C 648 0.00 1156 reject_low 4 ALIGNMENT 0 YS2-15p21.p1k chr06 568 848 31729 31728 F 281 0.00 1156 reject_low 3 ALIGNMENT 94 YS2-15p21.p1k chr06 460 567 31622 31729 F 108 98.15 1156 reject_low 3 ALIGNMENT 951 YS2-15p21.q1k chr12 42 1222 464437 465593 F 1181 94.92 1222 reject_low 1 ALIGNMENT 119 YS2-15p21.p1k chr12 200 82 485696 485814 C 119 100.00 1156 reject_low 6 ALIGNMENT 128 YS2-15p21.p1k chr12 200 67 489348 489481 C 134 98.51 1156 reject_low 2 ALIGNMENT 0 YS2-15p21.p1k chr12 848 201 482045 482044 C 648 0.00 1156 reject_low 5 ALIGNMENT 0 YS2-15p22.p1k chr04 827 682 1159824 1159823 C 146 0.00 1165 manual 1 ALIGNMENT 0 YS2-15p22.p1k chr08 194 62 291625 291624 C 133 0.00 1165 manual 0 ALIGNMENT 32 YS2-15p22.p1k chr08 681 195 291139 291624 C 487 70.23 1165 manual 0 ALIGNMENT 36 YS2-15p22.p1k chr04 681 412 1159823 1160091 C 270 71.85 1165 manual 1 ALIGNMENT 0 YS2-15p22.p1k chr08 827 682 291140 291139 C 146 0.00 1165 manual 0 ALIGNMENT 0 YS2-15p22.p1k chr04 411 62 1160092 1160091 C 350 0.00 1165 manual 1 ALIGNMENT 226 YS2-15p23.p1k chr12 761 122 459105 459737 C 640 80.00 1223 manual 0 ALIGNMENT 219 YS2-15p23.p1k chr12 761 141 468242 468854 C 621 80.03 1223 manual 1 ALIGNMENT 0 YS2-15p24.p1k vc_5 785 62 5022 5021 C 724 0.00 1172 reject_low 6 ALIGNMENT 131 YS2-15p24.p1k vc_4 786 977 5875 6061 F 192 92.19 1172 reject_low 5 ALIGNMENT 131 YS2-15p24.p1k vc_3 977 786 1915 2101 C 192 92.19 1172 reject_low 4 ALIGNMENT 131 YS2-15p24.p1k vc_7 786 977 104 290 F 192 92.19 1172 reject_low 7 ALIGNMENT 0 YS2-15p24.p1k vc_2 785 62 2102 2101 C 724 0.00 1172 reject_low 3 ALIGNMENT 131 YS2-15p24.p1k vc_7 786 977 13566 13752 F 192 92.19 1172 reject_low 8 ALIGNMENT 0 YS2-15p24.p1k vc_1 785 62 2102 2101 C 724 0.00 1172 reject_low 2 ALIGNMENT 0 YS2-15p24.p1k vc_3 785 62 2102 2101 C 724 0.00 1172 reject_low 4 ALIGNMENT 131 YS2-15p24.p1k vc_1 977 786 1915 2101 C 192 92.19 1172 reject_low 2 ALIGNMENT 22 YS2-15p24.p1k vc_3 812 786 2441 2468 C 27 96.30 1172 reject_low 10 ALIGNMENT 131 YS2-15p24.p1k vc_5 977 786 4835 5021 C 192 92.19 1172 reject_low 6 ALIGNMENT 702 YS2-15p24.p1k chr13 765 30 12130 12865 C 736 99.18 1172 accept 0 ALIGNMENT 0 YS2-15p24.p1k vc_1 785 62 2469 2468 C 724 0.00 1172 reject_low 9 ALIGNMENT 563 YS2-15p24.q1k chr13 5 656 12215 12863 F 652 96.63 1134 ambiguous_tel 1 ALIGNMENT 0 YS2-15p24.p1k vc_3 785 62 2469 2468 C 724 0.00 1172 reject_low 10 ALIGNMENT 0 YS2-15p24.p1k vc_4 62 785 5875 5874 F 724 0.00 1172 reject_low 5 ALIGNMENT 0 YS2-15p24.p1k vc_7 62 785 13566 13565 F 724 0.00 1172 reject_low 8 ALIGNMENT 131 YS2-15p24.p1k vc_2 977 786 1915 2101 C 192 92.19 1172 reject_low 3 ALIGNMENT 0 YS2-15p24.p1k vc_7 62 785 104 103 F 724 0.00 1172 reject_low 7 ALIGNMENT 22 YS2-15p24.p1k vc_1 812 786 2441 2468 C 27 96.30 1172 reject_low 9 ALIGNMENT 0 YS2-16a02.q1k chr04 781 739 871761 871760 C 43 0.00 1302 reject_low 29 ALIGNMENT 0 YS2-16a02.q1k chr06 62 422 137908 137907 F 361 0.00 1302 reject_low 10 ALIGNMENT 0 YS2-16a02.q1k chr04 756 781 1352966 1352965 F 26 0.00 1302 reject_low 19 ALIGNMENT 330 YS2-16a02.q1k chr11 41 422 516447 516827 F 382 98.43 1302 accept 0 ALIGNMENT 0 YS2-16a02.q1k chr03 422 62 168929 168928 C 361 0.00 1302 reject_low 20 ALIGNMENT 0 YS2-16a02.q1k chr03 62 455 149513 149512 F 394 0.00 1302 reject_low 25 ALIGNMENT 0 YS2-16a02.q1k chr14 62 421 519163 519162 F 360 0.00 1302 reject_low 17 ALIGNMENT 0 YS2-16a02.q1k chr04 422 62 651415 651414 C 361 0.00 1302 reject_low 15 ALIGNMENT 0 YS2-16a02.q1k chr04 421 62 884217 884216 C 360 0.00 1302 reject_low 14 ALIGNMENT 0 YS2-16a02.q1k chr03 781 738 124149 124148 C 44 0.00 1302 reject_low 23 ALIGNMENT 0 YS2-16a02.q1k chr06 683 781 137899 137898 F 99 0.00 1302 reject_low 28 ALIGNMENT 0 YS2-16a02.q1k chr03 741 781 151834 151833 F 41 0.00 1302 reject_low 24 ALIGNMENT 0 YS2-16a02.q1k chr12 62 421 941188 941187 F 360 0.00 1302 reject_low 7 ALIGNMENT 563 YS2-16a02.q1k chr15 423 1163 970282 971018 F 741 93.52 1302 reject_low 4 ALIGNMENT 299 YS2-16a02.q1k chr04 422 755 1352633 1352966 F 334 98.80 1302 reject_low 19 ALIGNMENT 0 YS2-16a02.q1k chr04 62 422 871816 871815 F 361 0.00 1302 reject_low 5 ALIGNMENT 212 YS2-16a02.q1k chr01 737 423 160256 160575 C 315 91.75 1302 reject_low 22 ALIGNMENT 0 YS2-16a02.q1k chr14 418 62 567998 567997 C 357 0.00 1302 reject_low 12 ALIGNMENT 0 YS2-16a02.q1k chr04 62 421 981164 981163 F 360 0.00 1302 reject_low 1 ALIGNMENT 0 YS2-16a02.q1k chr03 62 421 151517 151516 F 360 0.00 1302 reject_low 24 ALIGNMENT 42 YS2-16a02.q1k chr06 490 682 137718 137899 F 193 78.76 1302 reject_low 28 ALIGNMENT 0 YS2-16a02.q1k chr14 62 422 524730 524729 F 361 0.00 1302 reject_low 21 ALIGNMENT 0 YS2-16a02.q1k chr04 582 781 1353079 1353078 F 200 0.00 1302 reject_low 30 ALIGNMENT 544 YS2-16a02.q1k chr12 422 1152 941188 941914 F 731 93.02 1302 reject_low 7 ALIGNMENT 0 YS2-16a02.q1k chr03 421 62 143079 143078 C 360 0.00 1302 reject_low 26 ALIGNMENT 0 YS2-16a02.q1k chr04 421 62 519645 519644 C 360 0.00 1302 reject_low 13 ALIGNMENT 0 YS2-16a02.q1k chr03 734 781 149786 149785 F 48 0.00 1302 reject_low 25 ALIGNMENT 0 YS2-16a02.q1k chr06 62 489 137718 137717 F 428 0.00 1302 reject_low 28 ALIGNMENT 534 YS2-16a02.q1k chr03 419 1152 84806 85535 F 734 92.51 1302 reject_low 8 ALIGNMENT 105 YS2-16a02.q1k chr03 737 419 124148 124466 C 319 81.19 1302 reject_low 23 ALIGNMENT 363 YS2-16a02.q1k chr14 422 989 519163 519733 F 568 89.44 1302 reject_low 17 ALIGNMENT 0 YS2-16a02.q1k chr03 734 781 84717 84716 F 48 0.00 1302 reject_low 27 ALIGNMENT 566 YS2-16a02.q1k chr12 1163 423 980960 981696 C 741 93.52 1302 reject_low 3 ALIGNMENT 32 YS2-16a02.q1k chr04 738 689 871760 871810 C 50 92.00 1302 reject_low 29 ALIGNMENT 522 YS2-16a02.q1k chr04 1063 422 519004 519644 C 642 95.17 1302 reject_low 13 ALIGNMENT 555 YS2-16a02.q1k chr02 422 1163 29640 30377 F 742 93.13 1302 reject_low 6 ALIGNMENT 389 YS2-16a02.q1k chr04 989 422 883646 884216 C 568 90.85 1302 reject_low 14 ALIGNMENT 296 YS2-16a02.q1k chr01 1000 423 165581 166163 C 578 85.81 1302 reject_low 18 ALIGNMENT 555 YS2-16a02.q1k chr04 422 1296 981164 982028 F 875 90.29 1302 reject_low 1 ALIGNMENT 0 YS2-16a02.q1k chr04 688 62 871811 871810 C 627 0.00 1302 reject_low 29 ALIGNMENT 0 YS2-16a02.q1k chr03 418 62 124467 124466 C 357 0.00 1302 reject_low 23 ALIGNMENT 71 YS2-16a02.q1k chr03 456 733 149513 149786 F 278 78.78 1302 reject_low 25 ALIGNMENT 540 YS2-16a02.q1k chr06 423 1152 137908 138633 F 730 92.88 1302 reject_low 10 ALIGNMENT 0 YS2-16a02.q1k chr15 422 62 710025 710024 C 361 0.00 1302 reject_low 2 ALIGNMENT 0 YS2-16a02.q1k chr07 422 62 574705 574704 C 361 0.00 1302 reject_low 11 ALIGNMENT 0 YS2-16a02.q1k chr07 62 421 811451 811450 F 360 0.00 1302 reject_low 9 ALIGNMENT 0 YS2-16a02.q1k chr15 62 422 970282 970281 F 361 0.00 1302 reject_low 4 ALIGNMENT 0 YS2-16a02.q1k chr03 62 418 84806 84805 F 357 0.00 1302 reject_low 8 ALIGNMENT 0 YS2-16a02.q1k chr03 781 699 142804 142803 C 83 0.00 1302 reject_low 26 ALIGNMENT 0 YS2-16a02.q1k chr03 62 643 84626 84625 F 582 0.00 1302 reject_low 27 ALIGNMENT 534 YS2-16a02.q1k chr07 1152 423 573979 574704 C 730 92.47 1302 reject_low 11 ALIGNMENT 0 YS2-16a02.q1k chr12 62 422 650826 650825 F 361 0.00 1302 reject_low 16 ALIGNMENT 389 YS2-16a02.q1k chr12 423 989 650826 651395 F 567 90.83 1302 reject_low 16 ALIGNMENT 0 YS2-16a02.q1k chr02 62 421 29640 29639 F 360 0.00 1302 reject_low 6 ALIGNMENT 0 YS2-16a02.q1k chr01 422 62 160576 160575 C 361 0.00 1302 reject_low 22 ALIGNMENT 535 YS2-16a02.q1k chr15 1296 423 709160 710024 C 874 89.59 1302 reject_low 2 ALIGNMENT 0 YS2-16a02.q1k chr14 738 781 525046 525045 F 44 0.00 1302 reject_low 21 ALIGNMENT 27 YS2-16a02.q1k chr04 463 581 1352962 1353079 F 119 78.15 1302 reject_low 30 ALIGNMENT 541 YS2-16a02.q1k chr07 422 1152 811451 812177 F 731 92.89 1302 reject_low 9 ALIGNMENT 44 YS2-16a02.q1k chr03 644 733 84626 84717 F 90 85.56 1302 reject_low 27 ALIGNMENT 60 YS2-16a02.q1k chr03 698 422 142803 143078 C 277 77.26 1302 reject_low 26 ALIGNMENT 0 YS2-16a02.q1k chr04 62 462 1352962 1352961 F 401 0.00 1302 reject_low 30 ALIGNMENT 277 YS2-16a02.q1k chr03 737 423 168612 168928 C 315 98.41 1302 reject_low 20 ALIGNMENT 0 YS2-16a02.q1k chr04 62 421 1352633 1352632 F 360 0.00 1302 reject_low 19 ALIGNMENT 389 YS2-16a02.q1k chr04 989 423 650845 651414 C 567 90.83 1302 reject_low 15 ALIGNMENT 0 YS2-16a02.q1k chr11 423 781 516827 516826 F 359 0.00 1302 accept 0 ALIGNMENT 0 YS2-16a02.q1k chr01 422 62 166164 166163 C 361 0.00 1302 reject_low 18 ALIGNMENT 103 YS2-16a02.q1k chr03 422 740 151517 151834 F 319 81.19 1302 reject_low 24 ALIGNMENT 523 YS2-16a02.q1k chr14 1063 419 567353 567997 C 645 95.19 1302 reject_low 12 ALIGNMENT 557 YS2-16a02.q1k chr04 423 1163 871816 872552 F 741 93.25 1302 reject_low 5 ALIGNMENT 271 YS2-16a02.q1k chr14 423 737 524730 525046 F 315 97.78 1302 reject_low 21 ALIGNMENT 0 YS2-16a02.q1k chr12 422 62 981697 981696 C 361 0.00 1302 reject_low 3 ALIGNMENT 0 YS2-16a02.q1k chr01 781 738 160257 160256 C 44 0.00 1302 reject_low 22 ALIGNMENT 0 YS2-16a02.q1k chr03 781 738 168613 168612 C 44 0.00 1302 reject_low 20 ALIGNMENT 970 YS2-16a03.q1k chr12 40 1266 464137 465332 F 1227 95.19 1355 reject_low 1 ALIGNMENT 999 YS2-16a03.p1k chr12 1252 38 464560 465779 C 1215 94.90 1262 reject_low 1 ALIGNMENT 978 YS2-16a03.q1k chr12 40 1299 455000 456226 F 1260 94.76 1355 accept 0 ALIGNMENT 999 YS2-16a03.p1k chr12 1252 38 455423 456642 C 1215 94.90 1262 accept 0 ALIGNMENT 0 YS2-16a05.p1k chr14 855 357 781287 781286 C 499 0.00 1328 reject_low 1 ALIGNMENT 0 YS2-16a05.p1k chr07 357 855 7279 7278 F 499 0.00 1328 reject_low 6 ALIGNMENT 0 YS2-16a05.p1k chr03 855 357 307167 307166 C 499 0.00 1328 reject_low 7 ALIGNMENT 20 YS2-16a05.p1k chr12 239 276 13974 14011 F 38 86.84 1328 reject_low 15 ALIGNMENT 0 YS2-16a05.p1k chr08 203 855 12770 12769 F 653 0.00 1328 reject_low 10 ALIGNMENT 228 YS2-16a05.p1k chr14 356 36 781286 781605 C 321 91.28 1328 reject_low 1 ALIGNMENT 0 YS2-16a05.p1k chr09 855 357 433298 433297 C 499 0.00 1328 reject_low 2 ALIGNMENT 0 YS2-16a05.p1k chr12 855 357 1062294 1062293 C 499 0.00 1328 reject_low 8 ALIGNMENT 54 YS2-16a05.p1k chr13 189 45 922175 922320 C 145 80.69 1328 reject_low 14 ALIGNMENT 201 YS2-16a05.p1k chr10 36 356 9450 9766 F 321 88.79 1328 reject_low 5 ALIGNMENT 0 YS2-16a05.p1k chr09 357 855 9783 9782 F 499 0.00 1328 reject_low 4 ALIGNMENT 214 YS2-16a05.p1k chr09 356 36 433297 433613 C 321 90.03 1328 reject_low 2 ALIGNMENT 939 YS2-16a05.q1k chr01 1254 40 3277 4499 C 1215 94.24 1300 accept 0 ALIGNMENT 0 YS2-16a05.p1k chr15 357 855 12538 12537 F 499 0.00 1328 reject_low 9 ALIGNMENT 94 YS2-16a05.p1k chr02 36 198 8281 8445 F 163 86.50 1328 reject_low 11 ALIGNMENT 0 YS2-16a05.p1k chr15 855 190 1082369 1082368 C 666 0.00 1328 reject_low 12 ALIGNMENT 827 YS2-16a05.p1k chr01 36 1246 2478 3715 F 1211 91.49 1328 accept 0 ALIGNMENT 0 YS2-16a05.p1k chr16 190 855 8773 8772 F 666 0.00 1328 reject_low 13 ALIGNMENT 193 YS2-16a05.p1k chr03 356 36 307166 307484 C 321 88.16 1328 reject_low 7 ALIGNMENT 57 YS2-16a05.p1k chr15 189 45 1082368 1082513 C 145 81.38 1328 reject_low 12 ALIGNMENT 136 YS2-16a05.p1k chr15 36 356 12222 12538 F 321 83.18 1328 reject_low 9 ALIGNMENT 103 YS2-16a05.p1k chr08 36 202 12604 12770 F 167 88.02 1328 reject_low 10 ALIGNMENT 57 YS2-16a05.p1k chr16 45 189 8628 8773 F 145 80.69 1328 reject_low 13 ALIGNMENT 0 YS2-16a05.p1k chr11 357 855 2809 2808 F 499 0.00 1328 reject_low 3 ALIGNMENT 201 YS2-16a05.p1k chr09 36 356 9467 9783 F 321 88.79 1328 reject_low 4 ALIGNMENT 196 YS2-16a05.p1k chr07 36 356 6964 7279 F 321 88.47 1328 reject_low 6 ALIGNMENT 205 YS2-16a05.p1k chr11 36 356 2494 2809 F 321 89.41 1328 reject_low 3 ALIGNMENT 103 YS2-16a05.p1k chr12 36 202 13758 13926 F 167 88.02 1328 reject_low 15 ALIGNMENT 163 YS2-16a05.p1k chr12 356 36 1062293 1062604 C 321 85.67 1328 reject_low 8 ALIGNMENT 0 YS2-16a05.p1k chr10 357 855 9766 9765 F 499 0.00 1328 reject_low 5 ALIGNMENT 0 YS2-16a05.p1k chr12 203 238 13927 13973 F 36 0.00 1328 reject_low 15 ALIGNMENT 0 YS2-16a05.p1k chr12 277 855 14011 14010 F 579 0.00 1328 reject_low 15 ALIGNMENT 0 YS2-16a05.p1k chr02 199 855 8445 8444 F 657 0.00 1328 reject_low 11 ALIGNMENT 0 YS2-16a05.p1k chr13 855 190 922176 922175 C 666 0.00 1328 reject_low 14 ALIGNMENT 933 YS2-16a06.q1k chr11 36 1132 145738 146839 F 1097 95.99 1294 accept 0 ALIGNMENT 1026 YS2-16a06.p1k chr11 1287 34 149334 150600 C 1254 95.30 1353 accept 0 ALIGNMENT 1042 YS2-16a07.p1k chr07 1270 37 498989 500231 C 1234 96.11 1299 accept 0 ALIGNMENT 999 YS2-16a07.q1k chr07 40 1178 495407 496557 F 1139 96.93 1306 accept 0 ALIGNMENT 905 YS2-16a08.p1k chr08 36 1203 13812 14984 F 1168 94.01 1277 accept 0 ALIGNMENT 860 YS2-16a08.q1k chr08 1164 37 13938 15050 C 1128 93.88 1364 accept 0 ALIGNMENT 295 YS2-16a09.q1k chr15 595 38 159522 160078 C 558 84.59 1327 reject_low 1 ALIGNMENT 0 YS2-16a09.q1k chr15 867 596 159523 159522 C 272 0.00 1327 reject_low 1 ALIGNMENT 64 YS2-16a09.q1k chr13 38 280 435383 435625 F 243 76.54 1327 reject_low 2 ALIGNMENT 1017 YS2-16a09.q1k chr13 1188 38 872669 873821 C 1151 96.70 1327 accept 0 ALIGNMENT 958 YS2-16a09.p1k chr13 32 1141 869308 870404 F 1110 97.12 1332 accept 0 ALIGNMENT 0 YS2-16a09.q1k chr13 281 867 435625 435624 F 587 0.00 1327 reject_low 2 ALIGNMENT 1021 YS2-16a13.q1k chr12 28 1286 149071 150343 F 1259 95.31 1373 accept 0 ALIGNMENT 971 YS2-16a13.p1k chr12 1168 34 153391 154514 C 1135 96.74 1338 accept 0 ALIGNMENT 244 YS2-16a14.q1k vc_7 303 53 4922 5172 C 251 99.20 1040|0,1 reject_low 12 ALIGNMENT 0 YS2-16a14.p1k vc_3 562 62 8438 8437 C 501 0.00 736 reject_low 10 ALIGNMENT 0 YS2-16a14.p1k vc_1 562 62 9167 9166 C 501 0.00 736 reject_low 8 ALIGNMENT 0 YS2-16a14.q1k vc_7 53 54 5172 6360 C 0 0.00 1040 reject_low 12 ALIGNMENT 487 YS2-16a14.p1k vc_2 727 1 1035 1749 C 727 90.23 736 reject_low 4 ALIGNMENT 0 YS2-16a14.q1k vc_4 237 62 113 112 C 176 0.00 1040 reject_low 13 ALIGNMENT 0 YS2-16a14.q1k vc_4 62 237 1548 1547 F 176 0.00 1040 reject_low 11 ALIGNMENT 51 YS2-16a14.q1k vc_7 54 3 6360 6411 C 52 100.00 1040|1,0 reject_low 12 ALIGNMENT 487 YS2-16a14.p1k vc_1 727 1 1035 1749 C 727 90.23 736 reject_low 3 ALIGNMENT 65 YS2-16a14.q1k vc_4 304 238 6273 6339 C 67 100.00 1040 reject_low 14 ALIGNMENT 487 YS2-16a14.p1k vc_3 727 1 1035 1749 C 727 90.23 736 reject_low 5 ALIGNMENT 90 YS2-16a14.q1k vc_7 414 305 4589 4699 C 110 94.55 1040 reject_low 12 ALIGNMENT 0 YS2-16a14.q1k vc_4 237 62 6340 6339 C 176 0.00 1040 reject_low 14 ALIGNMENT 47 YS2-16a14.p1k vc_1 727 563 9009 9166 C 165 78.79 736 reject_low 8 ALIGNMENT 490 YS2-16a14.p1k vc_6 1 727 3712 4426 F 727 90.37 736 reject_low 2 ALIGNMENT 298 YS2-16a14.q1k vc_1 1 303 2689 2991 F 303 99.67 1040 reject_low 8 ALIGNMENT 298 YS2-16a14.q1k vc_3 1 303 2689 2991 F 303 99.67 1040 reject_low 10 ALIGNMENT 384 YS2-16a14.q1k vc_4 414 1 5238 5654 C 414 97.83 1040 reject_low 7 ALIGNMENT 456 YS2-16a14.q1k vc_5 1 623 2556 3173 F 623 92.30 1040 reject_vc 0 ALIGNMENT 47 YS2-16a14.p1k vc_3 727 563 8280 8437 C 165 78.79 736 reject_low 10 ALIGNMENT 47 YS2-16a14.p1k vc_2 727 563 8642 8799 C 165 78.79 736 reject_low 9 ALIGNMENT 152 YS2-16a14.q1k vc_4 311 623 1882 2189 F 313 85.30 1040 reject_low 11 ALIGNMENT 456 YS2-16a14.q1k vc_7 623 1 1952 2569 C 623 92.30 1040 reject_vc 1 ALIGNMENT 481 YS2-16a14.p1k vc_7 1 727 13918 14632 F 727 89.96 736 reject_low 6 ALIGNMENT 65 YS2-16a14.q1k vc_4 304 238 46 112 C 67 100.00 1040 reject_low 13 ALIGNMENT 0 YS2-16a14.q1k vc_4 305 310 1615 1881 F 6 0.00 1040 reject_low 11 ALIGNMENT 481 YS2-16a14.p1k vc_7 1 727 456 1170 F 727 89.96 736 reject_vc 1 ALIGNMENT 490 YS2-16a14.p1k vc_5 727 1 3955 4669 C 727 90.37 736 reject_vc 0 ALIGNMENT 298 YS2-16a14.q1k vc_2 1 303 2322 2624 F 303 99.67 1040 reject_low 9 ALIGNMENT 65 YS2-16a14.q1k vc_4 238 304 1548 1614 F 67 100.00 1040 reject_low 11 ALIGNMENT 0 YS2-16a14.q1k vc_7 304 304 4700 4921 C 1 0.00 1040 reject_low 12 ALIGNMENT 0 YS2-16a14.p1k vc_2 562 62 8800 8799 C 501 0.00 736 reject_low 9 ALIGNMENT 1036 YS2-16a16.q1k chr12 1256 39 464305 465524 C 1218 95.98 1329 accept 1 ALIGNMENT 1082 YS2-16a16.p1k chr12 35 1259 452103 453343 F 1225 96.65 1282 accept 0 ALIGNMENT 1082 YS2-16a16.p1k chr12 35 1259 461240 462480 F 1225 96.65 1282 accept 1 ALIGNMENT 0 YS2-16a16.p1k chr12 508 906 490543 490542 F 399 0.00 1282 reject_low 2 ALIGNMENT 1036 YS2-16a16.q1k chr12 1256 39 455168 456387 C 1218 95.98 1329 accept 0 ALIGNMENT 464 YS2-16a16.p1k chr12 35 507 490071 490543 F 473 99.58 1282 reject_low 2 ALIGNMENT 958 YS2-16a17.q1k chr15 35 1190 1000003 1001166 F 1156 95.85 1314 accept_chi 1 ALIGNMENT 1054 YS2-16a17.p1k chr15 34 1223 635302 636493 F 1190 97.14 1245 accept_chi 0 ALIGNMENT 0 YS2-16a18.p1k chr12 471 486 1068649 1068648 F 16 0.00 486 ambiguous_tel 9 ALIGNMENT 0 YS2-16a18.p1k chr09 486 471 3340 3339 C 16 0.00 486 ambiguous_tel 19 ALIGNMENT 0 YS2-16a18.p1k chr12 471 486 1075312 1075311 F 16 0.00 486 ambiguous_tel 10 ALIGNMENT 429 YS2-16a18.p1k chr05 33 470 573503 573940 F 438 99.54 486 ambiguous_tel 7 ALIGNMENT 0 YS2-16a18.q1k vc_7 306 303 4699 4923 C 4 0.00 666 reject_vc 25 ALIGNMENT 0 YS2-16a18.q1k vc_7 53 54 5172 6360 C 0 0.00 666 reject_vc 25 ALIGNMENT 378 YS2-16a18.q1k vc_7 519 1 2047 2569 C 519 91.52 666 reject_vc 1 ALIGNMENT 0 YS2-16a18.p1k chr15 471 486 1088276 1088275 F 16 0.00 486 ambiguous_tel 13 ALIGNMENT 432 YS2-16a18.p1k chr05 470 33 3015 3452 C 438 99.77 486 ambiguous_tel 2 ALIGNMENT 52 YS2-16a18.q1k vc_4 302 237 6276 6341 C 66 93.94 666 reject_low 28 ALIGNMENT 429 YS2-16a18.p1k chr15 33 470 1087839 1088276 F 438 99.54 486 ambiguous_tel 13 ALIGNMENT 0 YS2-16a18.p1k chr10 486 471 3323 3322 C 16 0.00 486 ambiguous_tel 20 ALIGNMENT 229 YS2-16a18.q1k vc_7 302 53 4924 5172 C 250 97.60 666|0,1 reject_vc 25 ALIGNMENT 284 YS2-16a18.q1k vc_2 1 302 2322 2622 F 302 98.34 666 reject_vc 23 ALIGNMENT 429 YS2-16a18.p1k chr13 470 33 3044 3481 C 438 99.54 486 ambiguous_tel 11 ALIGNMENT 0 YS2-16a18.p1k chr16 486 471 2861 2860 C 16 0.00 486 ambiguous_tel 14 ALIGNMENT 0 YS2-16a18.q1k vc_4 62 236 1546 1545 F 175 0.00 666 reject_vc 26 ALIGNMENT 0 YS2-16a18.p1k chr05 486 471 3016 3015 C 16 0.00 486 ambiguous_tel 2 ALIGNMENT 426 YS2-16a18.p1k chr08 33 470 559025 559462 F 438 99.32 486 ambiguous_tel 18 ALIGNMENT 284 YS2-16a18.q1k vc_1 1 302 2689 2989 F 302 98.34 666 reject_vc 22 ALIGNMENT 429 YS2-16a18.p1k chr12 33 470 1074875 1075312 F 438 99.54 486 ambiguous_tel 10 ALIGNMENT 429 YS2-16a18.p1k chr14 470 33 2951 3388 C 438 99.54 486 ambiguous_tel 12 ALIGNMENT 0 YS2-16a18.p1k chr12 486 471 3169 3168 C 16 0.00 486 ambiguous_tel 3 ALIGNMENT 0 YS2-16a18.p1k chr06 486 471 2206 2205 C 16 0.00 486 ambiguous_tel 16 ALIGNMENT 0 YS2-16a18.p1k chr13 486 471 3045 3044 C 16 0.00 486 ambiguous_tel 11 ALIGNMENT 432 YS2-16a18.p1k chr16 33 470 944572 945009 F 438 99.77 486 ambiguous_tel 5 ALIGNMENT 432 YS2-16a18.p1k chr12 470 33 8703 9140 C 438 99.77 486 ambiguous_tel 4 ALIGNMENT 429 YS2-16a18.p1k chr16 470 33 2860 3297 C 438 99.54 486 ambiguous_tel 14 ALIGNMENT 52 YS2-16a18.q1k vc_4 237 302 1546 1611 F 66 93.94 666 reject_vc 26 ALIGNMENT 429 YS2-16a18.p1k chr04 33 470 1528674 1529111 F 438 99.54 486 ambiguous_tel 6 ALIGNMENT 378 YS2-16a18.q1k vc_5 1 519 2556 3078 F 519 91.52 666 reject_vc 0 ALIGNMENT 423 YS2-16a18.p1k chr10 470 33 3322 3759 C 438 99.09 486 ambiguous_tel 20 ALIGNMENT 74 YS2-16a18.q1k vc_7 416 307 4589 4698 C 110 89.09 666 reject_vc 25 ALIGNMENT 97 YS2-16a18.q1k vc_4 309 519 1879 2094 F 211 82.94 666 reject_vc 26 ALIGNMENT 51 YS2-16a18.q1k vc_7 54 3 6360 6411 C 52 100.00 666|1,0 reject_vc 25 ALIGNMENT 426 YS2-16a18.p1k chr02 470 33 3369 3806 C 438 99.32 486 ambiguous_tel 15 ALIGNMENT 429 YS2-16a18.p1k chr07 33 470 1087580 1088017 F 438 99.54 486 ambiguous_tel 8 ALIGNMENT 0 YS2-16a18.p1k chr08 486 471 2901 2900 C 16 0.00 486 ambiguous_tel 17 ALIGNMENT 0 YS2-16a18.q1k vc_4 236 62 6342 6341 C 175 0.00 666 reject_low 28 ALIGNMENT 52 YS2-16a18.q1k vc_4 302 237 49 114 C 66 93.94 666 reject_low 27 ALIGNMENT 0 YS2-16a18.p1k chr02 486 471 3370 3369 C 16 0.00 486 ambiguous_tel 15 ALIGNMENT 0 YS2-16a18.p1k chr12 486 471 8704 8703 C 16 0.00 486 ambiguous_tel 4 ALIGNMENT 347 YS2-16a18.q1k vc_4 416 1 5238 5654 C 416 94.71 666 reject_vc 21 ALIGNMENT 284 YS2-16a18.q1k vc_3 1 302 2689 2989 F 302 98.34 666 reject_vc 24 ALIGNMENT 0 YS2-16a18.q1k vc_4 236 62 115 114 C 175 0.00 666 reject_low 27 ALIGNMENT 426 YS2-16a18.p1k chr06 470 33 2205 2642 C 438 99.32 486 ambiguous_tel 16 ALIGNMENT 432 YS2-16a18.p1k chr12 470 33 3168 3605 C 438 99.77 486 ambiguous_tel 3 ALIGNMENT 426 YS2-16a18.p1k chr09 470 33 3339 3776 C 438 99.32 486 ambiguous_tel 19 ALIGNMENT 0 YS2-16a18.p1k chr07 471 486 1088017 1088016 F 16 0.00 486 ambiguous_tel 8 ALIGNMENT 429 YS2-16a18.p1k chr12 33 470 1068212 1068649 F 438 99.54 486 ambiguous_tel 9 ALIGNMENT 0 YS2-16a18.p1k chr16 471 486 945009 945008 F 16 0.00 486 ambiguous_tel 5 ALIGNMENT 0 YS2-16a18.p1k chr04 471 486 1529111 1529110 F 16 0.00 486 ambiguous_tel 6 ALIGNMENT 0 YS2-16a18.p1k chr05 471 486 573940 573939 F 16 0.00 486 ambiguous_tel 7 ALIGNMENT 0 YS2-16a18.q1k vc_4 303 308 1612 1878 F 6 0.00 666 reject_vc 26 ALIGNMENT 426 YS2-16a18.p1k chr08 470 33 2900 3337 C 438 99.32 486 ambiguous_tel 17 ALIGNMENT 0 YS2-16a18.p1k chr14 486 471 2952 2951 C 16 0.00 486 ambiguous_tel 12 ALIGNMENT 0 YS2-16a18.p1k chr08 471 486 559462 559461 F 16 0.00 486 ambiguous_tel 18 ALIGNMENT 983 YS2-16a20.q1k chr04 1257 37 971537 972783 C 1221 95.00 1287 accept 0 ALIGNMENT 1070 YS2-16a20.p1k chr04 34 1226 968541 969737 F 1193 97.15 1230 accept 0 ALIGNMENT 0 YS2-16a21.p1k chr05 737 440 433465 433762 C 298 0.00 1189 reject_low 2 ALIGNMENT 997 YS2-16a21.q1k chr04 29 1245 1331787 1333002 F 1217 95.48 1247 accept 0 ALIGNMENT 996 YS2-16a21.p1k chr04 1189 33 1335974 1337137 C 1157 96.54 1189 accept 0 ALIGNMENT 179 YS2-16a21.p1k chr13 477 965 239759 240247 F 489 79.55 1189 reject_low 1 ALIGNMENT 0 YS2-16a21.p1k chr05 355 62 433847 433846 C 294 0.00 1189 reject_low 2 ALIGNMENT 61 YS2-16a21.p1k chr05 934 738 433268 433464 C 197 78.17 1189 reject_low 2 ALIGNMENT 0 YS2-16a21.p1k chr13 62 476 239759 239758 F 415 0.00 1189 reject_low 1 ALIGNMENT 31 YS2-16a21.p1k chr05 439 356 433763 433846 C 84 79.76 1189 reject_low 2 ALIGNMENT 913 YS2-16a22.q1k chr12 33 1047 454633 455639 F 1015 97.83 1292 accept 0 ALIGNMENT 913 YS2-16a22.q1k chr12 33 1047 463770 464776 F 1015 97.83 1292 accept 1 ALIGNMENT 1019 YS2-16a23.q1k chr04 1213 30 1215286 1216463 C 1184 96.88 1213 accept_trans 0 ALIGNMENT 974 YS2-16a23.p1k chr04 34 1147 1204971 1206070 F 1114 97.85 1217 accept_trans 0 ALIGNMENT 600 YS2-16a24.q1k chr08 24 736 32862 33572 F 713 96.21 1324 accept 0 ALIGNMENT 947 YS2-16a24.p1k chr08 1080 37 36061 37090 C 1044 98.18 1231 accept 0 ALIGNMENT 1042 YS2-16b01.q1k chr12 31 1286 454793 456040 F 1256 95.62 1293 accept 0 ALIGNMENT 1042 YS2-16b01.q1k chr12 31 1286 463930 465177 F 1256 95.62 1293 accept 1 ALIGNMENT 909 YS2-16b02.q1k chr15 1119 39 611530 612607 C 1081 96.21 1296 accept_chi 0 ALIGNMENT 687 YS2-16b02.p1k chr12 47 1064 59968 60976 F 1018 90.96 1300 accept_chi 1 ALIGNMENT 977 YS2-16b03.p1k chr06 49 1272 173217 174448 F 1224 94.36 1276 accept 0 ALIGNMENT 59 YS2-16b03.q1k chr06 1215 1087 178014 178149 C 129 83.72 1332 reject_low 1 ALIGNMENT 0 YS2-16b03.q1k chr06 1086 62 178150 178149 C 1025 0.00 1332 reject_low 1 ALIGNMENT 992 YS2-16b03.q1k chr06 1212 50 178158 179331 C 1163 96.90 1332 accept 0 ALIGNMENT 1100 YS2-16b04.p1k chr13 30 1250 607210 608438 F 1221 97.62 1273 accept 0 ALIGNMENT 1090 YS2-16b04.q1k chr13 1228 39 610537 611733 C 1190 98.15 1302 accept 0 ALIGNMENT 267 YS2-16b06.p1k vc_4 748 1094 5871 6219 F 347 92.80 1348 reject_low 8 ALIGNMENT 102 YS2-16b06.q1k vc_4 762 927 6353 6514 F 166 89.16 1347 reject_low 14 ALIGNMENT 0 YS2-16b06.q1k vc_4 761 761 5870 6352 F 1 0.00 1347 reject_low 14 ALIGNMENT 0 YS2-16b06.q1k vc_7 761 62 2728 2727 C 700 0.00 1347 reject_low 3 ALIGNMENT 114 YS2-16b06.q1k vc_7 997 762 2504 2727 C 236 86.44 1347 reject_low 3 ALIGNMENT 307 YS2-16b06.p1k vc_5 1317 748 4445 5025 C 570 85.96 1348 reject_low 2 ALIGNMENT 72 YS2-16b06.q1k vc_4 851 762 1446 1534 C 90 94.44 1347 reject_low 15 ALIGNMENT 0 YS2-16b06.q1k vc_7 62 724 13525 13524 F 663 0.00 1347 reject_low 20 ALIGNMENT 0 YS2-16b06.q1k vc_5 62 761 2398 2397 F 700 0.00 1347 reject_low 2 ALIGNMENT 37 YS2-16b06.q1k vc_5 760 724 5027 5063 C 37 100.00 1347 reject_low 19 ALIGNMENT 0 YS2-16b06.p1k vc_1 747 62 2106 2105 C 686 0.00 1348 reject_low 4 ALIGNMENT 0 YS2-16b06.p1k vc_7 62 747 13562 13561 F 686 0.00 1348 reject_low 7 ALIGNMENT 114 YS2-16b06.q1k vc_5 762 997 2398 2621 F 236 86.44 1347 reject_low 2 ALIGNMENT 0 YS2-16b06.q1k vc_4 761 62 1535 1534 C 700 0.00 1347 reject_low 15 ALIGNMENT 0 YS2-16b06.p1k vc_1 747 62 2473 2472 C 686 0.00 1348 reject_low 22 ALIGNMENT 307 YS2-16b06.p1k vc_3 1317 748 1525 2105 C 570 85.96 1348 reject_low 6 ALIGNMENT 0 YS2-16b06.q1k vc_2 721 62 2146 2145 C 660 0.00 1347 reject_low 17 ALIGNMENT 0 YS2-16b06.p1k vc_4 62 747 5871 5870 F 686 0.00 1348 reject_low 8 ALIGNMENT 114 YS2-16b06.q1k vc_1 762 997 2531 2754 F 236 86.44 1347 reject_low 9 ALIGNMENT 0 YS2-16b06.p1k vc_3 747 62 2473 2472 C 686 0.00 1348 reject_low 23 ALIGNMENT 0 YS2-16b06.q1k vc_5 723 62 37 36 C 662 0.00 1347 reject_low 21 ALIGNMENT 102 YS2-16b06.q1k vc_4 762 927 126 287 F 166 89.16 1347 reject_low 13 ALIGNMENT 0 YS2-16b06.q1k vc_1 62 761 2531 2530 F 700 0.00 1347 reject_low 9 ALIGNMENT 36 YS2-16b06.q1k vc_7 725 760 13525 13560 F 36 100.00 1347 reject_low 20 ALIGNMENT 114 YS2-16b06.q1k vc_3 762 997 2531 2754 F 236 86.44 1347 reject_low 11 ALIGNMENT 0 YS2-16b06.p1k vc_7 62 747 100 99 F 686 0.00 1348 reject_low 3 ALIGNMENT 39 YS2-16b06.q1k vc_2 760 722 2107 2145 C 39 100.00 1347 reject_low 17 ALIGNMENT 39 YS2-16b06.q1k vc_1 760 722 2474 2512 C 39 100.00 1347 reject_low 16 ALIGNMENT 0 YS2-16b06.q1k vc_3 62 761 2531 2530 F 700 0.00 1347 reject_low 11 ALIGNMENT 654 YS2-16b06.p1k chr15 31 730 674714 675414 F 700 98.71 1348 accept_chi 1 ALIGNMENT 307 YS2-16b06.p1k vc_1 1317 748 1525 2105 C 570 85.96 1348 reject_low 4 ALIGNMENT 307 YS2-16b06.p1k vc_2 1317 748 1525 2105 C 570 85.96 1348 reject_low 5 ALIGNMENT 26 YS2-16b06.p1k vc_1 778 748 2441 2472 C 31 96.77 1348 reject_low 22 ALIGNMENT 0 YS2-16b06.q1k vc_4 62 761 126 125 F 700 0.00 1347 reject_low 13 ALIGNMENT 0 YS2-16b06.p1k vc_5 747 62 5026 5025 C 686 0.00 1348 reject_low 2 ALIGNMENT 0 YS2-16b06.q1k vc_2 62 761 2164 2163 F 700 0.00 1347 reject_low 10 ALIGNMENT 0 YS2-16b06.p1k vc_2 747 62 2106 2105 C 686 0.00 1348 reject_low 5 ALIGNMENT 39 YS2-16b06.q1k vc_4 722 760 5831 5869 F 39 100.00 1347 reject_low 14 ALIGNMENT 0 YS2-16b06.p1k chr15 731 768 675414 675413 F 38 0.00 1348 accept_chi 1 ALIGNMENT 0 YS2-16b06.q1k vc_5 723 62 5064 5063 C 662 0.00 1347 reject_low 19 ALIGNMENT 307 YS2-16b06.p1k vc_7 748 1317 100 680 F 570 85.96 1348 reject_low 3 ALIGNMENT 39 YS2-16b06.q1k vc_3 760 722 2474 2512 C 39 100.00 1347 reject_low 18 ALIGNMENT 0 YS2-16b06.q1k vc_1 721 62 2513 2512 C 660 0.00 1347 reject_low 16 ALIGNMENT 0 YS2-16b06.p1k vc_3 747 62 2106 2105 C 686 0.00 1348 reject_low 6 ALIGNMENT 0 YS2-16b06.q1k vc_3 721 62 2513 2512 C 660 0.00 1347 reject_low 18 ALIGNMENT 307 YS2-16b06.p1k vc_7 748 1317 13562 14142 F 570 85.96 1348 reject_low 7 ALIGNMENT 657 YS2-16b06.q1k chr15 722 27 674714 675409 C 696 98.99 1347 accept_chi 0 ALIGNMENT 0 YS2-16b06.q1k vc_4 761 62 5813 5812 C 700 0.00 1347 reject_low 12 ALIGNMENT 114 YS2-16b06.q1k vc_2 762 997 2164 2387 F 236 86.44 1347 reject_low 10 ALIGNMENT 0 YS2-16b06.q1k vc_4 62 721 5831 5830 F 660 0.00 1347 reject_low 14 ALIGNMENT 26 YS2-16b06.p1k vc_3 778 748 2441 2472 C 31 96.77 1348 reject_low 23 ALIGNMENT 36 YS2-16b06.q1k vc_5 759 724 1 36 C 36 100.00 1347 reject_low 21 ALIGNMENT 112 YS2-16b06.q1k vc_4 997 762 5587 5812 C 236 86.02 1347 reject_low 12 ALIGNMENT 1018 YS2-16b07.q1k chr10 1263 39 227366 228593 C 1225 95.76 1332 accept 0 ALIGNMENT 1022 YS2-16b07.p1k chr10 33 1254 224974 226211 F 1222 95.91 1299 accept 0 ALIGNMENT 122 YS2-16b08.p1k chr14 961 1215 726941 727207 F 255 85.10 1275 accept 0 ALIGNMENT 0 YS2-16b08.p1k chr02 835 62 9677 9676 C 774 0.00 1275 reject_low 2 ALIGNMENT 83 YS2-16b08.p1k chr12 836 924 962958 963047 F 89 98.88 1275 reject_low 3 ALIGNMENT 74 YS2-16b08.p1k chr04 924 846 519743 519822 C 79 98.73 1275 reject_low 6 ALIGNMENT 77 YS2-16b08.p1k chr02 924 836 347605 347694 C 89 96.63 1275 reject_low 5 ALIGNMENT 0 YS2-16b08.p1k chr14 942 960 726235 726940 F 19 0.00 1275 accept 0 ALIGNMENT 81 YS2-16b08.p1k chr11 924 832 84217 84310 C 93 96.77 1275 reject_low 1 ALIGNMENT 83 YS2-16b08.p1k chr02 924 836 9587 9676 C 89 98.88 1275 reject_low 2 ALIGNMENT 0 YS2-16b08.p1k chr02 835 62 347695 347694 C 774 0.00 1275 reject_low 5 ALIGNMENT 0 YS2-16b08.p1k chr12 62 835 962958 962957 F 774 0.00 1275 reject_low 3 ALIGNMENT 783 YS2-16b08.p1k chr14 35 941 725320 726234 F 907 96.91 1275 accept 0 ALIGNMENT 0 YS2-16b08.p1k chr11 831 62 84311 84310 C 770 0.00 1275 reject_low 1 ALIGNMENT 82 YS2-16b08.p1k chr10 837 924 424338 424426 F 88 98.86 1275 reject_low 4 ALIGNMENT 0 YS2-16b08.p1k chr04 845 62 519823 519822 C 784 0.00 1275 reject_low 6 ALIGNMENT 0 YS2-16b08.p1k chr10 62 836 424338 424337 F 775 0.00 1275 reject_low 4 ALIGNMENT 1034 YS2-16b08.q1k chr14 1145 41 729373 730477 C 1105 98.28 1312 accept 0 ALIGNMENT 0 YS2-16b09.q1k chr12 62 159 41215 41214 F 98 0.00 1332 reject_low 2 ALIGNMENT 0 YS2-16b09.q1k chr04 205 907 226857 226856 F 703 0.00 1332 reject_low 3 ALIGNMENT 20 YS2-16b09.q1k chr02 204 171 40581 40614 C 34 100.00 1332 reject_low 5 ALIGNMENT 0 YS2-16b09.q1k chr04 163 62 226851 226850 C 102 0.00 1332 reject_low 4 ALIGNMENT 23 YS2-16b09.q1k chr04 164 204 226817 226857 F 41 100.00 1332 reject_low 3 ALIGNMENT 22 YS2-16b09.q1k chr04 202 164 226812 226850 C 39 100.00 1332 reject_low 4 ALIGNMENT 0 YS2-16b09.q1k chr04 907 203 226813 226812 C 705 0.00 1332 reject_low 4 ALIGNMENT 21 YS2-16b09.q1k chr12 160 204 41215 41259 F 45 95.56 1332 reject_low 2 ALIGNMENT 0 YS2-16b09.q1k chr02 907 205 40582 40581 C 703 0.00 1332 reject_low 5 ALIGNMENT 0 YS2-16b09.q1k chr13 62 168 388684 388683 F 107 0.00 1332 reject_low 1 ALIGNMENT 0 YS2-16b09.q1k chr12 205 907 41259 41258 F 703 0.00 1332 reject_low 2 ALIGNMENT 964 YS2-16b09.p1k chr12 31 1200 40174 41343 F 1170 95.38 1306 accept 0 ALIGNMENT 23 YS2-16b09.q1k chr13 169 208 388684 388723 F 40 95.00 1332 reject_low 1 ALIGNMENT 1020 YS2-16b09.q1k chr12 1203 32 40212 41392 C 1172 96.93 1332 accept 0 ALIGNMENT 0 YS2-16b09.q1k chr13 209 907 388723 388722 F 699 0.00 1332 reject_low 1 ALIGNMENT 0 YS2-16b09.q1k chr02 170 62 40615 40614 C 109 0.00 1332 reject_low 5 ALIGNMENT 0 YS2-16b09.q1k chr04 62 163 226817 226816 F 102 0.00 1332 reject_low 3 ALIGNMENT 269 YS2-16b10.q1k vc_5 763 1156 2398 2802 F 394 90.86 1310 reject_low 8 ALIGNMENT 0 YS2-16b10.q1k vc_5 724 62 5064 5063 C 663 0.00 1310 reject_low 15 ALIGNMENT 692 YS2-16b10.p1k chr12 733 37 466139 466835 C 697 100.00 733 accept 0 ALIGNMENT 0 YS2-16b10.q1k chr12 724 823 457698 457697 F 100 0.00 1310 accept 0 ALIGNMENT 692 YS2-16b10.p1k chr12 733 37 457002 457698 C 697 100.00 733 reject_low 1 ALIGNMENT 0 YS2-16b10.q1k vc_1 62 762 2531 2530 F 701 0.00 1310 reject_low 5 ALIGNMENT 0 YS2-16b10.q1k vc_7 762 62 2728 2727 C 701 0.00 1310 reject_low 3 ALIGNMENT 41 YS2-16b10.q1k vc_1 763 723 2472 2512 C 41 100.00 1310 reject_low 12 ALIGNMENT 0 YS2-16b10.q1k vc_5 724 62 37 36 C 663 0.00 1310 reject_low 17 ALIGNMENT 0 YS2-16b10.q1k vc_7 62 725 13525 13524 F 664 0.00 1310 reject_low 16 ALIGNMENT 39 YS2-16b10.q1k vc_5 763 725 5025 5063 C 39 100.00 1310 reject_low 15 ALIGNMENT 678 YS2-16b10.q1k chr12 32 723 457007 457698 F 692 99.71 1310 accept 0 ALIGNMENT 261 YS2-16b10.q1k vc_4 1176 763 5384 5812 C 414 89.37 1310 reject_low 4 ALIGNMENT 36 YS2-16b10.q1k vc_5 760 725 1 36 C 36 100.00 1310 reject_low 17 ALIGNMENT 678 YS2-16b10.q1k chr12 32 723 466144 466835 F 692 99.71 1310 reject_low 2 ALIGNMENT 0 YS2-16b10.q1k vc_1 823 764 2473 2472 C 60 0.00 1310 reject_low 12 ALIGNMENT 0 YS2-16b10.q1k vc_2 62 762 2164 2163 F 701 0.00 1310 reject_low 6 ALIGNMENT 268 YS2-16b10.q1k vc_7 1176 763 2301 2727 C 414 89.86 1310 reject_low 3 ALIGNMENT 0 YS2-16b10.q1k vc_4 762 62 5813 5812 C 701 0.00 1310 reject_low 4 ALIGNMENT 41 YS2-16b10.q1k vc_3 763 723 2472 2512 C 41 100.00 1310 reject_low 14 ALIGNMENT 87 YS2-16b10.q1k vc_4 851 763 1446 1534 C 89 100.00 1310 reject_low 11 ALIGNMENT 269 YS2-16b10.q1k vc_3 763 1156 2531 2935 F 394 90.86 1310 reject_low 7 ALIGNMENT 269 YS2-16b10.q1k vc_2 763 1156 2164 2568 F 394 90.86 1310 reject_low 6 ALIGNMENT 0 YS2-16b10.q1k vc_4 62 722 5831 5830 F 661 0.00 1310 reject_low 10 ALIGNMENT 0 YS2-16b10.q1k vc_4 62 762 126 125 F 701 0.00 1310 reject_low 9 ALIGNMENT 0 YS2-16b10.q1k vc_3 62 762 2531 2530 F 701 0.00 1310 reject_low 7 ALIGNMENT 0 YS2-16b10.q1k vc_4 764 763 5872 6353 F 0 0.00 1310 reject_low 10 ALIGNMENT 148 YS2-16b10.q1k vc_4 763 923 126 287 F 161 98.14 1310 reject_low 9 ALIGNMENT 0 YS2-16b10.q1k vc_2 823 764 2106 2105 C 60 0.00 1310 reject_low 13 ALIGNMENT 38 YS2-16b10.q1k vc_7 726 763 13525 13562 F 38 100.00 1310 reject_low 16 ALIGNMENT 0 YS2-16b10.q1k vc_4 762 62 1535 1534 C 701 0.00 1310 reject_low 11 ALIGNMENT 0 YS2-16b10.q1k vc_7 764 823 13562 13561 F 60 0.00 1310 reject_low 16 ALIGNMENT 0 YS2-16b10.q1k vc_1 722 62 2513 2512 C 661 0.00 1310 reject_low 12 ALIGNMENT 0 YS2-16b10.q1k vc_5 823 764 5026 5025 C 60 0.00 1310 reject_low 15 ALIGNMENT 41 YS2-16b10.q1k vc_4 723 763 5831 5871 F 41 100.00 1310 reject_low 10 ALIGNMENT 148 YS2-16b10.q1k vc_4 763 923 6353 6514 F 161 98.14 1310|1,0 reject_low 10 ALIGNMENT 0 YS2-16b10.q1k chr12 724 823 466835 466834 F 100 0.00 1310 reject_low 2 ALIGNMENT 0 YS2-16b10.q1k vc_5 823 761 2 1 C 63 0.00 1310 reject_low 17 ALIGNMENT 0 YS2-16b10.q1k vc_5 62 762 2398 2397 F 701 0.00 1310 reject_low 8 ALIGNMENT 0 YS2-16b10.q1k vc_3 823 764 2473 2472 C 60 0.00 1310 reject_low 14 ALIGNMENT 269 YS2-16b10.q1k vc_1 763 1156 2531 2935 F 394 90.86 1310 reject_low 5 ALIGNMENT 41 YS2-16b10.q1k vc_2 763 723 2105 2145 C 41 100.00 1310 reject_low 13 ALIGNMENT 0 YS2-16b10.q1k vc_3 722 62 2513 2512 C 661 0.00 1310 reject_low 14 ALIGNMENT 0 YS2-16b10.q1k vc_2 722 62 2146 2145 C 661 0.00 1310 reject_low 13 ALIGNMENT 912 YS2-16b11.p1k chr13 1089 31 536628 537678 C 1059 97.26 1357 accept 0 ALIGNMENT 952 YS2-16b11.q1k chr13 30 1216 531943 533119 F 1187 95.03 1332 accept 0 ALIGNMENT 984 YS2-16b12.p1k chr04 1133 37 1219514 1220622 C 1097 97.99 1247 accept 0 ALIGNMENT 988 YS2-16b12.q1k chr04 42 1171 1215525 1216655 F 1130 97.08 1322 accept 0 ALIGNMENT 37 YS2-16b13.p1k vc_3 724 570 8277 8428 C 155 76.77 734 reject_low 9 ALIGNMENT 467 YS2-16b13.p1k vc_3 724 1 1032 1749 C 724 89.36 734 reject_vc 3 ALIGNMENT 37 YS2-16b13.p1k vc_2 724 570 8639 8790 C 155 76.77 734 reject_low 8 ALIGNMENT 467 YS2-16b13.p1k vc_2 724 1 1032 1749 C 724 89.36 734 reject_vc 2 ALIGNMENT 461 YS2-16b13.p1k vc_7 1 724 13918 14635 F 724 89.09 734 reject_vc 5 ALIGNMENT 461 YS2-16b13.p1k vc_7 1 724 456 1173 F 724 89.09 734 reject_vc 4 ALIGNMENT 467 YS2-16b13.p1k vc_1 724 1 1032 1749 C 724 89.36 734 reject_vc 1 ALIGNMENT 0 YS2-16b13.p1k vc_1 569 62 9158 9157 C 508 0.00 734 reject_low 7 ALIGNMENT 454 YS2-16b13.p1k vc_6 1 616 3712 4322 F 616 92.37 734 reject_vc 6 ALIGNMENT 470 YS2-16b13.p1k vc_5 724 1 3952 4669 C 724 89.50 734 reject_vc 0 ALIGNMENT 0 YS2-16b13.p1k vc_2 569 62 8791 8790 C 508 0.00 734 reject_low 8 ALIGNMENT 0 YS2-16b13.p1k vc_3 569 62 8429 8428 C 508 0.00 734 reject_low 9 ALIGNMENT 37 YS2-16b13.p1k vc_1 724 570 9006 9157 C 155 76.77 734 reject_low 7 ALIGNMENT 931 YS2-16b14.q1k chr09 1162 31 293781 294921 C 1132 96.82 1344 accept 0 ALIGNMENT 945 YS2-16b14.p1k chr09 29 1175 293663 294789 F 1147 97.21 1304 accept 0 ALIGNMENT 41 YS2-16b15.q1k vc_1 609 569 2472 2512 C 41 100.00 609 reject_low 1 ALIGNMENT 0 YS2-16b15.q1k vc_4 62 568 5831 5830 F 507 0.00 609 reject_low 3 ALIGNMENT 0 YS2-16b15.q1k vc_7 62 571 13525 13524 F 510 0.00 609 reject_low 5 ALIGNMENT 0 YS2-16b15.q1k vc_3 568 62 2513 2512 C 507 0.00 609 reject_low 2 ALIGNMENT 41 YS2-16b15.q1k vc_3 609 569 2472 2512 C 41 100.00 609 reject_low 2 ALIGNMENT 0 YS2-16b15.q1k chr10 569 609 103419 103418 F 41 0.00 609 accept 0 ALIGNMENT 38 YS2-16b15.q1k vc_7 572 609 13525 13562 F 38 100.00 609 reject_low 5 ALIGNMENT 0 YS2-16b15.q1k vc_5 570 62 37 36 C 509 0.00 609 reject_low 6 ALIGNMENT 516 YS2-16b15.q1k chr10 26 568 102875 103419 F 543 99.45 609 accept 0 ALIGNMENT 36 YS2-16b15.q1k vc_5 606 571 1 36 C 36 100.00 609 reject_low 6 ALIGNMENT 41 YS2-16b15.q1k vc_4 569 609 5831 5871 F 41 100.00 609 reject_low 3 ALIGNMENT 0 YS2-16b15.q1k vc_1 568 62 2513 2512 C 507 0.00 609 reject_low 1 ALIGNMENT 0 YS2-16b15.p1k chr10 597 583 102877 102876 C 15 0.00 597 accept 0 ALIGNMENT 0 YS2-16b15.q1k vc_5 570 62 5064 5063 C 509 0.00 609 reject_low 4 ALIGNMENT 522 YS2-16b15.p1k chr10 582 39 102876 103419 C 544 99.63 597 accept 0 ALIGNMENT 39 YS2-16b15.q1k vc_5 609 571 5025 5063 C 39 100.00 609 reject_low 4 ALIGNMENT 0 YS2-16b17.p1k chr12 513 498 3169 3168 C 16 0.00 513 reject_low 2 ALIGNMENT 301 YS2-16b17.q1k chr14 59 485 2971 3388 F 427 91.80 525 reject_low 28 ALIGNMENT 301 YS2-16b17.q1k chr13 59 485 3064 3481 F 427 91.80 525 reject_low 27 ALIGNMENT 295 YS2-16b17.q1k chr10 59 485 3342 3759 F 427 91.33 525 reject_low 34 ALIGNMENT 424 YS2-16b17.p1k chr02 497 61 3369 3806 C 437 99.08 513 reject_low 13 ALIGNMENT 0 YS2-16b17.q1k vc_4 212 484 5831 5830 F 273 0.00 525 reject_low 36 ALIGNMENT 427 YS2-16b17.p1k chr04 61 497 1528674 1529111 F 437 99.31 513 reject_low 4 ALIGNMENT 427 YS2-16b17.p1k chr13 497 61 3044 3481 C 437 99.31 513 reject_low 9 ALIGNMENT 421 YS2-16b17.p1k chr09 497 61 3339 3776 C 437 98.86 513 reject_low 17 ALIGNMENT 302 YS2-16b17.q1k chr12 485 59 1068212 1068629 C 427 91.80 525 reject_low 25 ALIGNMENT 299 YS2-16b17.q1k chr08 108 485 2962 3337 F 378 93.65 525 reject_low 35 ALIGNMENT 41 YS2-16b17.q1k vc_4 485 525 5831 5871 F 41 100.00 525 reject_low 36 ALIGNMENT 0 YS2-16b17.q1k chr15 525 486 1087840 1087839 C 40 0.00 525 reject_low 26 ALIGNMENT 0 YS2-16b17.q1k chr02 486 525 3806 3805 F 40 0.00 525 reject_low 31 ALIGNMENT 0 YS2-16b17.p1k chr16 513 498 2861 2860 C 16 0.00 513 reject_low 12 ALIGNMENT 0 YS2-16b17.q1k chr08 486 525 3337 3336 F 40 0.00 525 reject_low 35 ALIGNMENT 0 YS2-16b17.q1k chr16 486 525 3297 3296 F 40 0.00 525 reject_low 29 ALIGNMENT 430 YS2-16b17.p1k chr12 497 61 3168 3605 C 437 99.54 513 reject_low 2 ALIGNMENT 0 YS2-16b17.p1k chr12 513 498 8704 8703 C 16 0.00 513 ambiguous_tel 0 ALIGNMENT 0 YS2-16b17.q1k chr05 525 486 573504 573503 C 40 0.00 525 reject_low 23 ALIGNMENT 0 YS2-16b17.q1k chr09 486 525 3776 3775 F 40 0.00 525 reject_low 33 ALIGNMENT 427 YS2-16b17.p1k chr07 61 497 1087580 1088017 F 437 99.31 513 reject_low 7 ALIGNMENT 298 YS2-16b17.q1k chr02 59 485 3389 3806 F 427 91.57 525 reject_low 31 ALIGNMENT 0 YS2-16b17.p1k chr02 513 498 3370 3369 C 16 0.00 513 reject_low 13 ALIGNMENT 427 YS2-16b17.p1k chr15 61 497 1087839 1088276 F 437 99.31 513 reject_low 11 ALIGNMENT 427 YS2-16b17.p1k chr05 497 61 3015 3452 C 437 99.31 513 reject_low 5 ALIGNMENT 424 YS2-16b17.p1k chr08 497 61 2900 3337 C 437 99.08 513 reject_low 15 ALIGNMENT 0 YS2-16b17.q1k vc_7 212 487 63 62 F 276 0.00 525 reject_low 37 ALIGNMENT 302 YS2-16b17.q1k chr05 485 59 573503 573920 C 427 91.80 525 reject_low 23 ALIGNMENT 0 YS2-16b17.p1k chr08 513 498 2901 2900 C 16 0.00 513 reject_low 15 ALIGNMENT 0 YS2-16b17.p1k chr08 498 513 559462 559461 F 16 0.00 513 reject_low 16 ALIGNMENT 0 YS2-16b17.q1k chr08 525 486 559026 559025 C 40 0.00 525 reject_low 30 ALIGNMENT 0 YS2-16b17.q1k chr14 486 525 3388 3387 F 40 0.00 525 reject_low 28 ALIGNMENT 0 YS2-16b17.p1k chr13 513 498 3045 3044 C 16 0.00 513 reject_low 9 ALIGNMENT 302 YS2-16b17.q1k chr07 485 59 1087580 1087997 C 427 91.80 525 reject_low 24 ALIGNMENT 430 YS2-16b17.p1k chr16 61 497 944572 945009 F 437 99.54 513 reject_low 3 ALIGNMENT 0 YS2-16b17.p1k chr05 513 498 3016 3015 C 16 0.00 513 reject_low 5 ALIGNMENT 298 YS2-16b17.q1k chr06 59 485 2225 2642 F 427 91.57 525 reject_low 32 ALIGNMENT 302 YS2-16b17.q1k chr15 485 59 1087839 1088256 C 427 91.80 525 reject_low 26 ALIGNMENT 430 YS2-16b17.p1k chr12 497 61 8703 9140 C 437 99.54 513 ambiguous_tel 0 ALIGNMENT 0 YS2-16b17.q1k chr12 486 525 9140 9139 F 40 0.00 525 reject_low 21 ALIGNMENT 299 YS2-16b17.q1k chr08 485 59 559025 559442 C 427 91.57 525 reject_low 30 ALIGNMENT 424 YS2-16b17.p1k chr06 497 61 2205 2642 C 437 99.08 513 reject_low 14 ALIGNMENT 0 YS2-16b17.p1k chr05 498 513 573940 573939 F 16 0.00 513 reject_low 6 ALIGNMENT 427 YS2-16b17.p1k chr12 61 497 1074875 1075312 F 437 99.31 513 reject_low 8 ALIGNMENT 298 YS2-16b17.q1k chr09 59 485 3359 3776 F 427 91.57 525 reject_low 33 ALIGNMENT 0 YS2-16b17.q1k chr12 525 486 1068213 1068212 C 40 0.00 525 reject_low 25 ALIGNMENT 304 YS2-16b17.q1k chr12 59 485 8723 9140 F 427 92.04 525 reject_low 21 ALIGNMENT 0 YS2-16b17.p1k chr10 513 498 3323 3322 C 16 0.00 513 reject_low 18 ALIGNMENT 0 YS2-16b17.q1k chr05 486 525 3452 3451 F 40 0.00 525 reject_low 20 ALIGNMENT 38 YS2-16b17.q1k vc_7 488 525 13525 13562 F 38 100.00 525 reject_low 38 ALIGNMENT 302 YS2-16b17.q1k chr12 485 59 1074875 1075292 C 427 91.80 525 ambiguous_tel 1 ALIGNMENT 0 YS2-16b17.q1k chr07 525 486 1087581 1087580 C 40 0.00 525 reject_low 24 ALIGNMENT 301 YS2-16b17.q1k chr16 59 485 2880 3297 F 427 91.80 525 reject_low 29 ALIGNMENT 427 YS2-16b17.p1k chr05 61 497 573503 573940 F 437 99.31 513 reject_low 6 ALIGNMENT 304 YS2-16b17.q1k chr12 59 485 3188 3605 F 427 92.04 525 ambiguous_tel 0 ALIGNMENT 0 YS2-16b17.p1k chr16 498 513 945009 945008 F 16 0.00 513 reject_low 3 ALIGNMENT 0 YS2-16b17.p1k chr07 498 513 1088017 1088016 F 16 0.00 513 reject_low 7 ALIGNMENT 0 YS2-16b17.q1k chr06 486 525 2642 2641 F 40 0.00 525 reject_low 32 ALIGNMENT 418 YS2-16b17.p1k chr10 497 61 3322 3759 C 437 98.63 513 reject_low 18 ALIGNMENT 0 YS2-16b17.q1k chr12 486 525 3605 3604 F 40 0.00 525 ambiguous_tel 0 ALIGNMENT 304 YS2-16b17.q1k chr05 59 485 3035 3452 F 427 92.04 525 reject_low 20 ALIGNMENT 427 YS2-16b17.p1k chr16 497 61 2860 3297 C 437 99.31 513 reject_low 12 ALIGNMENT 0 YS2-16b17.p1k chr14 513 498 2952 2951 C 16 0.00 513 reject_low 10 ALIGNMENT 0 YS2-16b17.p1k chr04 498 513 1529111 1529110 F 16 0.00 513 reject_low 4 ALIGNMENT 0 YS2-16b17.q1k chr04 525 486 1528675 1528674 C 40 0.00 525 reject_low 22 ALIGNMENT 0 YS2-16b17.p1k chr12 498 513 1075312 1075311 F 16 0.00 513 reject_low 8 ALIGNMENT 427 YS2-16b17.p1k chr14 497 61 2951 3388 C 437 99.31 513 reject_low 10 ALIGNMENT 302 YS2-16b17.q1k chr04 485 59 1528674 1529091 C 427 91.80 525 reject_low 22 ALIGNMENT 0 YS2-16b17.p1k chr09 513 498 3340 3339 C 16 0.00 513 reject_low 17 ALIGNMENT 0 YS2-16b17.q1k chr16 525 486 944573 944572 C 40 0.00 525 reject_low 19 ALIGNMENT 0 YS2-16b17.q1k vc_7 212 487 13525 13524 F 276 0.00 525 reject_low 38 ALIGNMENT 0 YS2-16b17.q1k chr10 486 525 3759 3758 F 40 0.00 525 reject_low 34 ALIGNMENT 427 YS2-16b17.p1k chr12 61 497 1068212 1068649 F 437 99.31 513 ambiguous_tel 1 ALIGNMENT 0 YS2-16b17.p1k chr12 498 513 1068649 1068648 F 16 0.00 513 ambiguous_tel 1 ALIGNMENT 0 YS2-16b17.q1k chr13 486 525 3481 3480 F 40 0.00 525 reject_low 27 ALIGNMENT 305 YS2-16b17.q1k chr16 485 59 944572 944989 C 427 92.04 525 reject_low 19 ALIGNMENT 0 YS2-16b17.p1k chr06 513 498 2206 2205 C 16 0.00 513 reject_low 14 ALIGNMENT 424 YS2-16b17.p1k chr08 61 497 559025 559462 F 437 99.08 513 reject_low 16 ALIGNMENT 0 YS2-16b17.p1k chr15 498 513 1088276 1088275 F 16 0.00 513 reject_low 11 ALIGNMENT 0 YS2-16b17.q1k chr12 525 486 1074876 1074875 C 40 0.00 525 ambiguous_tel 1 ALIGNMENT 38 YS2-16b17.q1k vc_7 488 525 63 100 F 38 100.00 525 reject_low 37 ALIGNMENT 358 YS2-16b18.q1k vc_4 416 1 5238 5654 C 416 95.91 773 reject_low 7 ALIGNMENT 59 YS2-16b18.q1k vc_4 303 238 6275 6339 C 66 98.48 773 reject_low 14 ALIGNMENT 0 YS2-16b18.q1k vc_7 305 304 4700 4922 C 2 0.00 773 reject_low 11 ALIGNMENT 336 YS2-16b18.p1k vc_2 517 1 1238 1749 C 517 89.94 521 reject_low 4 ALIGNMENT 339 YS2-16b18.p1k vc_5 517 1 4158 4669 C 517 90.14 521 reject_vc 0 ALIGNMENT 294 YS2-16b18.q1k vc_1 1 303 2689 2990 F 303 99.34 773 reject_low 8 ALIGNMENT 0 YS2-16b18.q1k vc_4 62 237 1548 1547 F 176 0.00 773 reject_low 12 ALIGNMENT 294 YS2-16b18.q1k vc_3 1 303 2689 2990 F 303 99.34 773 reject_low 10 ALIGNMENT 0 YS2-16b18.q1k vc_4 237 62 113 112 C 176 0.00 773 reject_low 13 ALIGNMENT 336 YS2-16b18.p1k vc_3 517 1 1238 1749 C 517 89.94 521 reject_low 5 ALIGNMENT 71 YS2-16b18.q1k vc_7 416 306 4589 4699 C 111 89.19 773 reject_low 11 ALIGNMENT 339 YS2-16b18.p1k vc_6 1 517 3712 4223 F 517 90.14 521 reject_low 2 ALIGNMENT 294 YS2-16b18.q1k vc_2 1 303 2322 2623 F 303 99.34 773 reject_low 9 ALIGNMENT 116 YS2-16b18.q1k vc_4 314 660 1884 2225 F 347 80.40 773 reject_low 12 ALIGNMENT 415 YS2-16b18.q1k vc_5 1 660 2556 3209 F 660 88.94 773 reject_vc 0 ALIGNMENT 0 YS2-16b18.q1k vc_4 304 313 1613 1883 F 10 0.00 773 reject_low 12 ALIGNMENT 0 YS2-16b18.q1k vc_7 53 54 5172 6360 C 0 0.00 773 reject_low 11 ALIGNMENT 59 YS2-16b18.q1k vc_4 303 238 48 112 C 66 98.48 773 reject_low 13 ALIGNMENT 51 YS2-16b18.q1k vc_7 54 3 6360 6411 C 52 100.00 773|1,0 reject_low 11 ALIGNMENT 415 YS2-16b18.q1k vc_7 660 1 1916 2569 C 660 88.79 773 reject_vc 1 ALIGNMENT 59 YS2-16b18.q1k vc_4 238 303 1548 1612 F 66 98.48 773 reject_low 12 ALIGNMENT 0 YS2-16b18.q1k vc_4 237 62 6340 6339 C 176 0.00 773 reject_low 14 ALIGNMENT 330 YS2-16b18.p1k vc_7 1 517 13918 14429 F 517 89.56 521 reject_low 6 ALIGNMENT 239 YS2-16b18.q1k vc_7 303 53 4923 5172 C 251 98.80 773|0,1 reject_low 11 ALIGNMENT 336 YS2-16b18.p1k vc_1 517 1 1238 1749 C 517 89.94 521 reject_low 3 ALIGNMENT 330 YS2-16b18.p1k vc_7 1 517 456 967 F 517 89.56 521 reject_vc 1 ALIGNMENT 0 YS2-16b19.q1k vc_5 62 770 2398 2397 F 709 0.00 1312 reject_low 2 ALIGNMENT 95 YS2-16b19.q1k vc_7 1192 989 4955 5162 C 204 84.31 1312 reject_low 11 ALIGNMENT 0 YS2-16b19.q1k vc_4 770 62 5813 5812 C 709 0.00 1312 reject_low 4 ALIGNMENT 36 YS2-16b19.q1k vc_5 768 733 1 36 C 36 100.00 1312 reject_low 18 ALIGNMENT 678 YS2-16b19.p1k chr03 725 33 171267 171959 C 693 99.86 726 accept_chi 0 ALIGNMENT 0 YS2-16b19.q1k vc_1 730 62 2513 2512 C 669 0.00 1312 reject_low 12 ALIGNMENT 0 YS2-16b19.q1k vc_2 859 772 2106 2105 C 88 0.00 1312 reject_low 13 ALIGNMENT 41 YS2-16b19.q1k vc_4 731 771 5831 5871 F 41 100.00 1312 reject_low 9 ALIGNMENT 0 YS2-16b19.q1k vc_5 732 62 5064 5063 C 671 0.00 1312 reject_low 15 ALIGNMENT 0 YS2-16b19.q1k vc_7 770 62 2728 2727 C 709 0.00 1312 reject_low 3 ALIGNMENT 38 YS2-16b19.q1k vc_7 734 771 13525 13562 F 38 100.00 1312 reject_low 17 ALIGNMENT 0 YS2-16b19.q1k vc_7 772 859 100 99 F 88 0.00 1312 reject_low 16 ALIGNMENT 0 YS2-16b19.q1k vc_4 62 770 126 125 F 709 0.00 1312 reject_low 8 ALIGNMENT 0 YS2-16b19.q1k chr03 731 859 171959 171958 F 129 0.00 1312 accept_chi 1 ALIGNMENT 295 YS2-16b19.q1k vc_7 1287 771 2196 2727 C 517 87.43 1312 reject_low 3 ALIGNMENT 0 YS2-16b19.q1k vc_3 859 772 2473 2472 C 88 0.00 1312 reject_low 14 ALIGNMENT 0 YS2-16b19.q1k vc_1 62 770 2531 2530 F 709 0.00 1312 reject_low 5 ALIGNMENT 37 YS2-16b19.q1k vc_7 981 931 6360 6411 C 51 92.16 1312 reject_low 11 ALIGNMENT 0 YS2-16b19.q1k vc_4 772 771 5872 6353 F 0 0.00 1312 reject_low 9 ALIGNMENT 0 YS2-16b19.q1k vc_7 930 62 6412 6411 C 869 0.00 1312 reject_low 11 ALIGNMENT 295 YS2-16b19.q1k vc_5 771 1287 2398 2929 F 517 87.23 1312 reject_low 2 ALIGNMENT 285 YS2-16b19.q1k vc_1 771 1192 2531 2958 F 422 90.52 1312 reject_low 5 ALIGNMENT 0 YS2-16b19.q1k vc_1 859 772 2473 2472 C 88 0.00 1312 reject_low 12 ALIGNMENT 153 YS2-16b19.q1k vc_4 771 932 6353 6514 F 162 98.77 1312|1,0 reject_low 9 ALIGNMENT 39 YS2-16b19.q1k vc_5 771 733 5025 5063 C 39 100.00 1312 reject_low 15 ALIGNMENT 0 YS2-16b19.q1k vc_2 62 770 2164 2163 F 709 0.00 1312 reject_low 6 ALIGNMENT 41 YS2-16b19.q1k vc_2 771 731 2105 2145 C 41 100.00 1312 reject_low 13 ALIGNMENT 0 YS2-16b19.q1k vc_4 62 730 5831 5830 F 669 0.00 1312 reject_low 9 ALIGNMENT 153 YS2-16b19.q1k vc_4 771 932 126 287 F 162 98.77 1312 reject_low 8 ALIGNMENT 41 YS2-16b19.q1k vc_1 771 731 2472 2512 C 41 100.00 1312 reject_low 12 ALIGNMENT 0 YS2-16b19.q1k vc_7 772 859 13562 13561 F 88 0.00 1312 reject_low 17 ALIGNMENT 41 YS2-16b19.q1k vc_3 771 731 2472 2512 C 41 100.00 1312 reject_low 14 ALIGNMENT 0 YS2-16b19.q1k vc_3 62 770 2531 2530 F 709 0.00 1312 reject_low 7 ALIGNMENT 285 YS2-16b19.q1k vc_2 771 1192 2164 2591 F 422 90.52 1312 reject_low 6 ALIGNMENT 288 YS2-16b19.q1k vc_4 1287 771 5279 5812 C 517 87.04 1312 reject_low 4 ALIGNMENT 0 YS2-16b19.q1k vc_7 62 733 63 62 F 672 0.00 1312 reject_low 16 ALIGNMENT 674 YS2-16b19.q1k chr03 37 730 171267 171959 F 694 99.71 1312 accept_chi 1 ALIGNMENT 0 YS2-16b19.q1k vc_3 730 62 2513 2512 C 669 0.00 1312 reject_low 14 ALIGNMENT 38 YS2-16b19.q1k vc_7 734 771 63 100 F 38 100.00 1312 reject_low 16 ALIGNMENT 0 YS2-16b19.q1k vc_5 732 62 37 36 C 671 0.00 1312 reject_low 18 ALIGNMENT 285 YS2-16b19.q1k vc_3 771 1192 2531 2958 F 422 90.52 1312 reject_low 7 ALIGNMENT 0 YS2-16b19.q1k vc_4 770 62 1535 1534 C 709 0.00 1312 reject_low 10 ALIGNMENT 0 YS2-16b19.q1k vc_2 730 62 2146 2145 C 669 0.00 1312 reject_low 13 ALIGNMENT 0 YS2-16b19.q1k vc_7 988 982 5163 6359 C 7 0.00 1312 reject_low 11 ALIGNMENT 84 YS2-16b19.q1k vc_4 859 771 1446 1534 C 89 98.88 1312 reject_low 10 ALIGNMENT 0 YS2-16b19.q1k vc_5 859 772 5026 5025 C 88 0.00 1312 reject_low 15 ALIGNMENT 0 YS2-16b19.q1k vc_5 859 769 2 1 C 91 0.00 1312 reject_low 18 ALIGNMENT 0 YS2-16b19.q1k vc_7 62 733 13525 13524 F 672 0.00 1312 reject_low 17 ALIGNMENT 962 YS2-16b20.q1k chr04 1192 41 868957 870118 C 1152 95.92 1295 accept 0 ALIGNMENT 947 YS2-16b21.p1k chr12 1127 35 455706 456800 C 1093 96.34 1189 reject_low 2 ALIGNMENT 961 YS2-16b21.p1k chr12 1187 35 464786 465937 C 1153 95.40 1189 accept 0,1 ALIGNMENT 1059 YS2-16b21.q1k chr12 43 1253 463770 464977 F 1211 96.70 1276 accept 1 ALIGNMENT 1059 YS2-16b21.q1k chr12 43 1253 454633 455840 F 1211 96.70 1276 accept 0 ALIGNMENT 784 YS2-16b22.q1k scplasm1 1 953 4313 5261 F 953 95.07 981 accept_chi 0 ALIGNMENT 344 YS2-16b22.p1k scplasm1 1 538 940 1479 F 538 89.41 805 accept_chi 1 ALIGNMENT 1019 YS2-16b23.p1k chr08 1200 38 35943 37090 C 1163 97.08 1225 accept 0 ALIGNMENT 1023 YS2-16b23.q1k chr08 33 1176 32862 34006 F 1144 97.38 1208 accept 0 ALIGNMENT 0 YS2-16b24.p1k chr07 62 919 712210 712209 F 858 0.00 1198 reject_low 8 ALIGNMENT 122 YS2-16b24.p1k chr04 920 1194 668091 668372 F 275 84.00 1198 reject_low 15 ALIGNMENT 0 YS2-16b24.p1k chr14 62 919 546739 546738 F 858 0.00 1198 reject_low 14 ALIGNMENT 119 YS2-16b24.p1k chr04 920 1194 1023131 1023412 F 275 83.64 1198 reject_low 17 ALIGNMENT 0 YS2-16b24.p1k chr08 915 62 146669 146668 C 854 0.00 1198 reject_low 10 ALIGNMENT 120 YS2-16b24.p1k chr07 1181 914 319497 319771 C 268 83.96 1198 reject_low 16 ALIGNMENT 143 YS2-16b24.p1k chr07 920 1194 707199 707479 F 275 86.55 1198 reject_low 20 ALIGNMENT 126 YS2-16b24.p1k chr05 1194 919 434686 434968 C 276 84.42 1198 reject_low 13 ALIGNMENT 128 YS2-16b24.p1k chr04 1194 920 946008 946289 C 275 84.73 1198 reject_low 12 ALIGNMENT 0 YS2-16b24.p1k chr01 62 917 182612 182611 F 856 0.00 1198 reject_low 6 ALIGNMENT 104 YS2-16b24.p1k chr07 803 913 700952 701062 F 111 97.30 1198 reject_low 20 ALIGNMENT 0 YS2-16b24.p1k chr07 913 62 319772 319771 C 852 0.00 1198 reject_low 16 ALIGNMENT 116 YS2-16b24.p1k chr11 914 794 578596 578716 C 121 98.35 1198 reject_low 3 ALIGNMENT 1016 YS2-16b24.q1k chr12 41 1136 870250 871345 F 1096 97.99 1206 accept 0 ALIGNMENT 0 YS2-16b24.p1k chr09 62 919 205217 205216 F 858 0.00 1198 reject_low 9 ALIGNMENT 235 YS2-16b24.p1k chr16 794 1194 769191 769598 F 401 87.78 1198 reject_low 1 ALIGNMENT 0 YS2-16b24.p1k chr07 914 919 701063 707198 F 6 0.00 1198 reject_low 20 ALIGNMENT 0 YS2-16b24.p1k chr09 62 919 210305 210304 F 858 0.00 1198 reject_low 18 ALIGNMENT 0 YS2-16b24.p1k chr11 915 62 202634 202633 C 854 0.00 1198 reject_low 7 ALIGNMENT 112 YS2-16b24.p1k chr15 914 796 438633 438751 C 119 97.48 1198 reject_low 4 ALIGNMENT 143 YS2-16b24.p1k chr07 920 1194 712210 712490 F 275 86.55 1198 reject_low 8 ALIGNMENT 143 YS2-16b24.p1k chr11 1194 916 202349 202633 C 279 86.38 1198 reject_low 7 ALIGNMENT 110 YS2-16b24.p1k chr07 919 803 115476 115592 C 117 97.44 1198 reject_low 5 ALIGNMENT 866 YS2-16b24.p1k chr12 920 42 875358 876236 C 879 99.77 1198 accept 0 ALIGNMENT 0 YS2-16b24.p1k chr11 793 62 578717 578716 C 732 0.00 1198 reject_low 3 ALIGNMENT 0 YS2-16b24.p1k chr03 62 921 168386 168385 F 860 0.00 1198 reject_low 19 ALIGNMENT 113 YS2-16b24.p1k chr04 914 786 359566 359693 C 129 96.12 1198 reject_low 2 ALIGNMENT 0 YS2-16b24.p1k chr15 795 62 438752 438751 C 734 0.00 1198 reject_low 4 ALIGNMENT 131 YS2-16b24.p1k chr08 1194 916 146383 146668 C 279 84.95 1198 reject_low 10 ALIGNMENT 0 YS2-16b24.p1k chr16 62 793 769191 769190 F 732 0.00 1198 reject_low 1 ALIGNMENT 0 YS2-16b24.p1k chr07 802 62 115593 115592 C 741 0.00 1198 reject_low 5 ALIGNMENT 145 YS2-16b24.p1k chr01 918 1194 182612 182894 F 277 86.64 1198 reject_low 6 ALIGNMENT 100 YS2-16b24.p1k chr03 922 1120 168386 168593 F 199 85.93 1198 reject_low 19 ALIGNMENT 0 YS2-16b24.p1k chr04 62 919 668091 668090 F 858 0.00 1198 reject_low 15 ALIGNMENT 143 YS2-16b24.p1k chr09 920 1194 205217 205497 F 275 86.55 1198 reject_low 9 ALIGNMENT 131 YS2-16b24.p1k chr15 920 1194 854273 854554 F 275 85.09 1198 reject_low 11 ALIGNMENT 0 YS2-16b24.p1k chr04 919 62 946290 946289 C 858 0.00 1198 reject_low 12 ALIGNMENT 0 YS2-16b24.p1k chr04 785 62 359694 359693 C 724 0.00 1198 reject_low 2 ALIGNMENT 0 YS2-16b24.p1k chr07 62 802 700952 700951 F 741 0.00 1198 reject_low 20 ALIGNMENT 0 YS2-16b24.p1k chr05 918 62 434969 434968 C 857 0.00 1198 reject_low 13 ALIGNMENT 0 YS2-16b24.p1k chr15 62 919 854273 854272 F 858 0.00 1198 reject_low 11 ALIGNMENT 127 YS2-16b24.p1k chr14 920 1165 546739 546992 F 246 86.18 1198 reject_low 14 ALIGNMENT 122 YS2-16b24.p1k chr09 920 1125 210305 210518 F 206 88.83 1198 reject_low 18 ALIGNMENT 0 YS2-16b24.p1k chr04 62 919 1023131 1023130 F 858 0.00 1198 reject_low 17 ALIGNMENT 961 YS2-16c01.p1k chr05 34 1219 344239 345416 F 1186 95.45 1315 accept 0 ALIGNMENT 970 YS2-16c01.q1k chr05 1167 40 347370 348497 C 1128 96.10 1330 accept 0 ALIGNMENT 941 YS2-16c02.p1k chr03 1227 44 206286 207469 C 1184 94.00 1299 accept 0 ALIGNMENT 996 YS2-16c02.q1k chr03 37 1210 203487 204662 F 1174 95.91 1291 accept 0 ALIGNMENT 41 YS2-16c03.q1k vc_4 269 309 5831 5871 F 41 100.00 309 reject_low 5 ALIGNMENT 0 YS2-16c03.q1k chr04 269 309 890493 890492 F 41 0.00 309 accept_chi 1 ALIGNMENT 41 YS2-16c03.q1k vc_2 309 269 2105 2145 C 41 100.00 309 reject_low 3 ALIGNMENT 36 YS2-16c03.q1k vc_5 306 271 1 36 C 36 100.00 309 reject_low 8 ALIGNMENT 41 YS2-16c03.q1k vc_3 309 269 2472 2512 C 41 100.00 309 reject_low 4 ALIGNMENT 41 YS2-16c03.q1k vc_1 309 269 2472 2512 C 41 100.00 309 reject_low 2 ALIGNMENT 0 YS2-16c03.q1k vc_4 62 268 5831 5830 F 207 0.00 309 reject_low 5 ALIGNMENT 0 YS2-16c03.p1k chr04 281 266 890262 890261 C 16 0.00 281 accept_chi 0 ALIGNMENT 0 YS2-16c03.q1k vc_3 268 62 2513 2512 C 207 0.00 309 reject_low 4 ALIGNMENT 0 YS2-16c03.q1k vc_2 268 62 2146 2145 C 207 0.00 309 reject_low 3 ALIGNMENT 228 YS2-16c03.q1k chr04 36 268 890261 890493 F 233 99.57 309 accept_chi 1 ALIGNMENT 0 YS2-16c03.q1k vc_7 62 271 13525 13524 F 210 0.00 309 reject_low 7 ALIGNMENT 0 YS2-16c03.q1k vc_1 268 62 2513 2512 C 207 0.00 309 reject_low 2 ALIGNMENT 38 YS2-16c03.q1k vc_7 272 309 13525 13562 F 38 100.00 309 reject_low 7 ALIGNMENT 228 YS2-16c03.p1k chr04 265 33 890261 890493 C 233 99.57 281 accept_chi 0 ALIGNMENT 0 YS2-16c03.q1k vc_5 270 62 37 36 C 209 0.00 309 reject_low 8 ALIGNMENT 39 YS2-16c03.q1k vc_5 309 271 5025 5063 C 39 100.00 309 reject_low 6 ALIGNMENT 0 YS2-16c03.q1k vc_5 270 62 5064 5063 C 209 0.00 309 reject_low 6 ALIGNMENT 123 YS2-16c04.q1k vc_3 43 352 2532 2851 F 310 81.61 454 reject_vc 2 ALIGNMENT 34 YS2-16c04.q1k vc_5 41 3 5026 5063 C 39 97.44 454 reject_low 12 ALIGNMENT 36 YS2-16c04.q1k vc_4 1 41 5831 5870 F 41 97.56 454 reject_low 7 ALIGNMENT 77 YS2-16c04.q1k vc_4 123 43 1453 1533 C 81 98.77 454 reject_low 8 ALIGNMENT 123 YS2-16c04.q1k vc_5 43 352 2399 2718 F 310 81.61 454 reject_vc 3 ALIGNMENT 0 YS2-16c04.q1k vc_4 42 42 5871 6353 F 1 0.00 454 reject_low 7 ALIGNMENT 32 YS2-16c04.q1k vc_5 39 3 1 36 C 37 97.30 454 reject_low 14 ALIGNMENT 33 YS2-16c04.q1k vc_7 4 41 13525 13561 F 38 97.37 454 reject_low 13 ALIGNMENT 105 YS2-16c04.q1k vc_4 43 187 127 273 F 145 91.72 454 reject_low 6 ALIGNMENT 123 YS2-16c04.q1k vc_1 43 352 2532 2851 F 310 81.61 454 reject_vc 0 ALIGNMENT 36 YS2-16c04.q1k vc_2 41 1 2106 2145 C 41 97.56 454 reject_low 10 ALIGNMENT 123 YS2-16c04.q1k vc_2 43 352 2165 2484 F 310 81.61 454 reject_vc 1 ALIGNMENT 119 YS2-16c04.q1k vc_4 222 43 5630 5811 C 180 89.44 454 reject_low 5 ALIGNMENT 105 YS2-16c04.q1k vc_4 43 187 6354 6500 F 145 91.72 454 reject_low 7 ALIGNMENT 36 YS2-16c04.q1k vc_3 41 1 2473 2512 C 41 97.56 454 reject_low 11 ALIGNMENT 36 YS2-16c04.q1k vc_1 41 1 2473 2512 C 41 97.56 454 reject_low 9 ALIGNMENT 123 YS2-16c04.q1k vc_7 352 43 2407 2726 C 310 81.29 454 reject_vc 4 ALIGNMENT 0 YS2-16c05.q1k vc_5 360 62 5064 5063 C 299 0.00 399 reject_low 6 ALIGNMENT 39 YS2-16c05.q1k vc_5 399 361 5025 5063 C 39 100.00 399 reject_low 6 ALIGNMENT 41 YS2-16c05.q1k vc_2 399 359 2105 2145 C 41 100.00 399 reject_low 3 ALIGNMENT 0 YS2-16c05.q1k vc_1 358 62 2513 2512 C 297 0.00 399 reject_low 2 ALIGNMENT 0 YS2-16c05.q1k vc_7 62 361 13525 13524 F 300 0.00 399 reject_low 7 ALIGNMENT 41 YS2-16c05.q1k vc_4 359 399 5831 5871 F 41 100.00 399 reject_low 5 ALIGNMENT 297 YS2-16c05.q1k chr10 49 358 497313 497623 F 310 99.68 399 accept_chi 0 ALIGNMENT 0 YS2-16c05.q1k chr10 359 399 497623 497622 F 41 0.00 399 accept_chi 0 ALIGNMENT 38 YS2-16c05.q1k vc_7 362 399 13525 13562 F 38 100.00 399 reject_low 7 ALIGNMENT 291 YS2-16c05.p1k chr10 345 37 497313 497623 C 309 99.35 364 accept_chi 1 ALIGNMENT 0 YS2-16c05.q1k vc_5 360 62 37 36 C 299 0.00 399 reject_low 8 ALIGNMENT 41 YS2-16c05.q1k vc_3 399 359 2472 2512 C 41 100.00 399 reject_low 4 ALIGNMENT 41 YS2-16c05.q1k vc_1 399 359 2472 2512 C 41 100.00 399 reject_low 2 ALIGNMENT 0 YS2-16c05.q1k vc_3 358 62 2513 2512 C 297 0.00 399 reject_low 4 ALIGNMENT 0 YS2-16c05.q1k vc_2 358 62 2146 2145 C 297 0.00 399 reject_low 3 ALIGNMENT 0 YS2-16c05.q1k vc_4 62 358 5831 5830 F 297 0.00 399 reject_low 5 ALIGNMENT 0 YS2-16c05.p1k chr10 364 346 497314 497313 C 19 0.00 364 accept_chi 1 ALIGNMENT 36 YS2-16c05.q1k vc_5 396 361 1 36 C 36 100.00 399 reject_low 8 ALIGNMENT 0 YS2-16c06.q1k chrm 297 124 68613 68612 C 174 0.00 297 ambiguous 13 ALIGNMENT 38 YS2-16c06.q1k chrm 100 140 85641 85681 F 41 97.56 297 ambiguous 18 ALIGNMENT 0 YS2-16c06.q1k chrm 297 75 72792 72791 C 223 0.00 297 ambiguous 17 ALIGNMENT 87 YS2-16c06.q1k chrm 138 34 2537 2639 C 105 96.19 297 ambiguous 12 ALIGNMENT 0 YS2-16c06.q1k chrm 95 94 34221 34213 F 0 0.00 297 ambiguous 20 ALIGNMENT 40 YS2-16c06.q1k vc_3 297 258 2472 2511 C 40 100.00 297 reject_vc 10 ALIGNMENT 0 YS2-16c06.q1k chrm 258 297 66061 66060 F 40 0.00 297 ambiguous 7 ALIGNMENT 0 YS2-16c06.q1k chrm 297 124 50727 50726 C 174 0.00 297 ambiguous 15 ALIGNMENT 23 YS2-16c06.q1k chrm 32 74 65897 65942 F 43 88.37 297 ambiguous 7 ALIGNMENT 0 YS2-16c06.q1k vc_7 62 259 13525 13524 F 198 0.00 297 reject_vc 11 ALIGNMENT 288 YS2-16c06.p1k vc_3 480 1 1285 1749 C 480 89.38 733 reject_vc 2 ALIGNMENT 32 YS2-16c06.q1k chrm 47 94 34173 34220 F 48 91.67 297 ambiguous 20 ALIGNMENT 0 YS2-16c06.q1k chrm 297 90 62530 62529 C 208 0.00 297 ambiguous 22 ALIGNMENT 0 YS2-16c06.q1k chrm 99 91 84217 84213 C 9 0.00 297 ambiguous 19 ALIGNMENT 0 YS2-16c06.q1k chrm 297 138 6128 6127 C 160 0.00 297 ambiguous 21 ALIGNMENT 0 YS2-16c06.q1k vc_2 257 62 2145 2144 C 196 0.00 297 reject_vc 9 ALIGNMENT 27 YS2-16c06.q1k chrm 90 37 84214 84269 C 54 88.89 297 ambiguous 19 ALIGNMENT 0 YS2-16c06.q1k chrm 75 297 55463 55462 F 223 0.00 297 ambiguous 16 ALIGNMENT 87 YS2-16c06.q1k chrm 131 257 65935 66061 F 127 99.21 297 ambiguous 7 ALIGNMENT 30 YS2-16c06.q1k chrm 74 35 6191 6229 C 40 97.50 297 ambiguous 21 ALIGNMENT 31 YS2-16c06.q1k chrm 34 74 55424 55463 F 41 97.56 297 ambiguous 16 ALIGNMENT 29 YS2-16c06.q1k chrm 95 123 34214 34242 F 29 100.00 297 ambiguous 20 ALIGNMENT 288 YS2-16c06.p1k vc_1 480 1 1285 1749 C 480 89.38 733 reject_vc 0 ALIGNMENT 0 YS2-16c06.q1k vc_3 257 62 2512 2511 C 196 0.00 297 reject_vc 10 ALIGNMENT 0 YS2-16c06.q1k chrm 71 72 62547 65068 C 0 0.00 297 ambiguous 22 ALIGNMENT 42 YS2-16c06.q1k chrm 33 123 40354 40435 F 91 89.01 297 ambiguous 14 ALIGNMENT 0 YS2-16c06.q1k vc_1 257 62 2512 2511 C 196 0.00 297 reject_vc 8 ALIGNMENT 38 YS2-16c06.q1k vc_7 260 297 13525 13562 F 38 100.00 297 reject_vc 11 ALIGNMENT 0 YS2-16c06.q1k chrm 297 141 84177 84176 C 157 0.00 297 ambiguous 19 ALIGNMENT 52 YS2-16c06.q1k chrm 123 47 68612 68686 C 77 92.21 297 ambiguous 13 ALIGNMENT 0 YS2-16c06.q1k chrm 91 99 85644 85640 F 9 0.00 297 ambiguous 18 ALIGNMENT 32 YS2-16c06.q1k chrm 123 34 50726 50813 C 90 85.56 297 ambiguous 15 ALIGNMENT 22 YS2-16c06.q1k chrm 89 68 62529 62550 C 22 100.00 297|0,4 ambiguous 22 ALIGNMENT 0 YS2-16c06.q1k chrm 141 297 85681 85680 F 157 0.00 297 ambiguous 18 ALIGNMENT 38 YS2-16c06.q1k chrm 140 100 84176 84216 C 41 97.56 297 ambiguous 19 ALIGNMENT 288 YS2-16c06.p1k vc_6 1 480 3712 4176 F 480 89.38 733 reject_vc 4 ALIGNMENT 40 YS2-16c06.q1k vc_2 297 258 2105 2144 C 40 100.00 297 reject_vc 9 ALIGNMENT 0 YS2-16c06.q1k chrm 297 139 2538 2537 C 159 0.00 297 ambiguous 12 ALIGNMENT 22 YS2-16c06.q1k chrm 137 109 6127 6155 C 29 93.10 297 ambiguous 21 ALIGNMENT 288 YS2-16c06.p1k vc_2 480 1 1285 1749 C 480 89.38 733 reject_vc 1 ALIGNMENT 0 YS2-16c06.q1k chrm 75 130 65943 65934 F 56 0.00 297 ambiguous 7 ALIGNMENT 282 YS2-16c06.p1k vc_7 1 480 13918 14382 F 480 88.96 733 reject_vc 6 ALIGNMENT 0 YS2-16c06.q1k chrm 108 75 6156 6190 C 34 0.00 297 ambiguous 21 ALIGNMENT 0 YS2-16c06.q1k chrm 124 297 34242 34241 F 174 0.00 297 ambiguous 20 ALIGNMENT 0 YS2-16c06.q1k chrm 124 297 40435 40434 F 174 0.00 297 ambiguous 14 ALIGNMENT 288 YS2-16c06.p1k vc_5 480 1 4205 4669 C 480 89.38 733 reject_vc 3 ALIGNMENT 40 YS2-16c06.q1k vc_1 297 258 2472 2511 C 40 100.00 297 reject_vc 8 ALIGNMENT 282 YS2-16c06.p1k vc_7 1 480 456 920 F 480 88.96 733 reject_vc 5 ALIGNMENT 42 YS2-16c06.q1k chrm 33 90 85583 85643 F 58 94.83 297 ambiguous 18 ALIGNMENT 28 YS2-16c06.q1k chrm 74 34 65066 65104 C 41 95.12 297|3,0 ambiguous 22 ALIGNMENT 31 YS2-16c06.q1k chrm 74 34 72791 72830 C 41 97.56 297 ambiguous 17 ALIGNMENT 279 YS2-16c07.q1k vc_2 1 301 2322 2624 F 301 98.01 696 reject_vc 5 ALIGNMENT 435 YS2-16c07.q1k vc_5 1 644 2556 3189 F 644 91.30 696 reject_vc 1 ALIGNMENT 43 YS2-16c07.q1k vc_4 302 238 46 112 C 65 90.77 696 reject_low 9 ALIGNMENT 0 YS2-16c07.q1k vc_4 237 62 113 112 C 176 0.00 696 reject_low 9 ALIGNMENT 96 YS2-16c07.q1k vc_7 423 303 4583 4699 C 121 95.87 696 reject_vc 7 ALIGNMENT 279 YS2-16c07.q1k vc_3 1 301 2689 2991 F 301 98.01 696 reject_vc 6 ALIGNMENT 43 YS2-16c07.q1k vc_4 302 238 6273 6339 C 65 90.77 696 reject_low 10 ALIGNMENT 148 YS2-16c07.q1k vc_4 309 644 1882 2205 F 336 85.12 696 reject_vc 8 ALIGNMENT 0 YS2-16c07.q1k vc_4 62 237 1548 1547 F 176 0.00 696 reject_vc 8 ALIGNMENT 0 YS2-16c07.q1k vc_4 303 308 1615 1881 F 6 0.00 696 reject_vc 8 ALIGNMENT 0 YS2-16c07.q1k vc_7 53 54 5172 6360 C 0 0.00 696 reject_vc 7 ALIGNMENT 279 YS2-16c07.q1k vc_1 1 301 2689 2991 F 301 98.01 696 reject_vc 4 ALIGNMENT 348 YS2-16c07.p1k chr13 418 38 81162 81542 C 381 98.95 437 accept 0 ALIGNMENT 372 YS2-16c07.q1k vc_4 423 1 5232 5654 C 423 96.93 696 reject_vc 3 ALIGNMENT 43 YS2-16c07.q1k vc_4 238 302 1548 1614 F 65 90.77 696 reject_vc 8 ALIGNMENT 51 YS2-16c07.q1k vc_7 54 3 6360 6411 C 52 100.00 696|1,0 reject_vc 7 ALIGNMENT 225 YS2-16c07.q1k vc_7 301 53 4922 5172 C 249 97.19 696|0,1 reject_vc 7 ALIGNMENT 0 YS2-16c07.q1k vc_7 302 302 4700 4921 C 1 0.00 696 reject_vc 7 ALIGNMENT 435 YS2-16c07.q1k vc_7 644 1 1936 2569 C 644 90.84 696 reject_vc 2 ALIGNMENT 0 YS2-16c07.p1k chr13 437 419 81163 81162 C 19 0.00 437 accept 0 ALIGNMENT 0 YS2-16c07.q1k vc_4 237 62 6340 6339 C 176 0.00 696 reject_low 10 ALIGNMENT 1019 YS2-16c08.p1k chr16 36 1236 405126 406345 F 1201 95.92 1281 accept 0 ALIGNMENT 1078 YS2-16c08.q1k chr16 1293 29 407965 409237 C 1265 96.13 1293 accept 0 ALIGNMENT 0 YS2-16c08.p1k chr02 62 358 604921 604920 F 297 0.00 1281 reject_low 1 ALIGNMENT 430 YS2-16c08.p1k chr02 359 925 604921 605487 F 567 92.24 1281 reject_low 1 ALIGNMENT 189 YS2-16c09.q1k vc_5 1 282 2556 2835 F 282 89.72 725 reject_vc 4 ALIGNMENT 134 YS2-16c09.q1k vc_7 282 53 4945 5172 C 230 86.96 725|0,1 reject_vc 7 ALIGNMENT 182 YS2-16c09.q1k vc_4 282 1 5373 5654 C 282 89.01 725 reject_vc 6 ALIGNMENT 189 YS2-16c09.q1k vc_2 1 282 2322 2601 F 282 89.72 725 reject_vc 2 ALIGNMENT 189 YS2-16c09.q1k vc_3 1 282 2689 2968 F 282 89.72 725 reject_vc 3 ALIGNMENT 189 YS2-16c09.q1k vc_7 282 1 2290 2569 C 282 89.72 725 reject_vc 5 ALIGNMENT 0 YS2-16c09.q1k vc_7 53 54 5172 6360 C 0 0.00 725 reject_vc 7 ALIGNMENT 444 YS2-16c09.p1k chr15 32 495 502927 503392 F 464 99.35 514 accept 0 ALIGNMENT 189 YS2-16c09.q1k vc_1 1 282 2689 2968 F 282 89.72 725 reject_vc 1 ALIGNMENT 0 YS2-16c09.p1k chr15 496 514 503392 503391 F 19 0.00 514 accept 0 ALIGNMENT 51 YS2-16c09.q1k vc_7 54 3 6360 6411 C 52 100.00 725|1,0 reject_vc 7 ALIGNMENT 35 YS2-16c10.q1k vc_2 938 898 2105 2145 C 41 95.12 1351 reject_low 6 ALIGNMENT 0 YS2-16c10.p1k vc_7 62 923 13562 13561 F 862 0.00 1286 reject_low 5 ALIGNMENT 138 YS2-16c10.p1k vc_2 1249 924 1769 2105 C 326 81.90 1286 reject_low 2 ALIGNMENT 820 YS2-16c10.q1k chr07 887 27 340794 341653 C 861 99.54 1351 accept 0 ALIGNMENT 0 YS2-16c10.p1k vc_3 923 62 2106 2105 C 862 0.00 1286 reject_low 3 ALIGNMENT 0 YS2-16c10.q1k vc_2 897 62 2146 2145 C 836 0.00 1351 reject_low 6 ALIGNMENT 138 YS2-16c10.p1k vc_1 1249 924 1769 2105 C 326 81.90 1286 reject_low 1 ALIGNMENT 0 YS2-16c10.p1k vc_2 923 62 2106 2105 C 862 0.00 1286 reject_low 2 ALIGNMENT 0 YS2-16c10.p1k vc_4 62 923 5871 5870 F 862 0.00 1286 reject_low 4 ALIGNMENT 138 YS2-16c10.p1k vc_4 924 1249 5871 6207 F 326 81.90 1286 reject_low 4 ALIGNMENT 0 YS2-16c10.p1k vc_1 923 62 2106 2105 C 862 0.00 1286 reject_low 1 ALIGNMENT 841 YS2-16c10.p1k chr07 34 905 340784 341655 F 872 99.89 1286 accept 0 ALIGNMENT 138 YS2-16c10.p1k vc_3 1249 924 1769 2105 C 326 81.90 1286 reject_low 3 ALIGNMENT 138 YS2-16c10.p1k vc_7 924 1249 13562 13898 F 326 81.90 1286 reject_low 5 ALIGNMENT 901 YS2-16c11.q1k chr16 28 1055 449401 450446 F 1028 97.08 1296 accept 0 ALIGNMENT 995 YS2-16c11.p1k chr16 1190 31 449701 450865 C 1160 96.47 1409 accept 0 ALIGNMENT 78 YS2-16c12.q1k chr15 695 614 113800 113881 C 82 98.78 1356 reject_low 3 ALIGNMENT 0 YS2-16c12.q1k chr10 62 621 59100 59099 F 560 0.00 1356 reject_low 10 ALIGNMENT 0 YS2-16c12.q1k chr15 62 615 354034 354033 F 554 0.00 1356 reject_low 9 ALIGNMENT 0 YS2-16c12.q1k chr14 842 697 104804 104803 C 146 0.00 1356 reject_low 5 ALIGNMENT 75 YS2-16c12.q1k chr14 614 698 560684 560770 F 85 96.47 1356 reject_low 2 ALIGNMENT 0 YS2-16c12.q1k chr09 842 700 325742 325741 C 143 0.00 1356 reject_low 1 ALIGNMENT 0 YS2-16c12.q1k chr14 613 62 104887 104886 C 552 0.00 1356 reject_low 5 ALIGNMENT 0 YS2-16c12.q1k chr15 695 842 354112 354111 F 148 0.00 1356 reject_low 9 ALIGNMENT 76 YS2-16c12.q1k chr14 696 614 104803 104886 C 83 97.59 1356 reject_low 5 ALIGNMENT 0 YS2-16c12.q1k chr02 614 62 266458 266457 C 553 0.00 1356 reject_low 6 ALIGNMENT 0 YS2-16c12.q1k chr10 696 842 59173 59172 F 147 0.00 1356 reject_low 10 ALIGNMENT 74 YS2-16c12.q1k chr10 622 695 59100 59173 F 74 100.00 1356 reject_low 10 ALIGNMENT 0 YS2-16c12.q1k chr15 613 62 113882 113881 C 552 0.00 1356 reject_low 3 ALIGNMENT 0 YS2-16c12.q1k chr03 842 696 295480 295479 C 147 0.00 1356 reject_low 7 ALIGNMENT 0 YS2-16c12.q1k chr08 62 615 116096 116095 F 554 0.00 1356 reject_low 4 ALIGNMENT 0 YS2-16c12.q1k chr03 615 62 295559 295558 C 554 0.00 1356 reject_low 7 ALIGNMENT 0 YS2-16c12.q1k chr02 842 695 266379 266378 C 148 0.00 1356 reject_low 6 ALIGNMENT 0 YS2-16c12.q1k chr14 699 842 560770 560769 F 144 0.00 1356 reject_low 2 ALIGNMENT 76 YS2-16c12.q1k chr15 616 694 354034 354112 F 79 98.73 1356 reject_low 9 ALIGNMENT 77 YS2-16c12.q1k chr03 695 616 295479 295558 C 80 98.75 1356 reject_low 7 ALIGNMENT 76 YS2-16c12.q1k chr04 616 695 434254 434334 F 80 98.75 1356 reject_low 8 ALIGNMENT 0 YS2-16c12.q1k chr04 696 842 434334 434333 F 147 0.00 1356 reject_low 8 ALIGNMENT 77 YS2-16c12.q1k chr02 694 615 266378 266457 C 80 98.75 1356 reject_low 6 ALIGNMENT 0 YS2-16c12.q1k chr09 613 62 325827 325826 C 552 0.00 1356 reject_low 1 ALIGNMENT 854 YS2-16c12.q1k chr09 1166 29 174546 175724 C 1138 93.32 1356 accept 0 ALIGNMENT 86 YS2-16c12.q1k chr09 699 614 325741 325826 C 86 100.00 1356 reject_low 1 ALIGNMENT 874 YS2-16c12.p1k chr09 35 1112 170895 171995 F 1078 95.55 1359 accept 0 ALIGNMENT 0 YS2-16c12.q1k chr14 62 613 560684 560683 F 552 0.00 1356 reject_low 2 ALIGNMENT 0 YS2-16c12.q1k chr15 842 696 113801 113800 C 147 0.00 1356 reject_low 3 ALIGNMENT 0 YS2-16c12.q1k chr04 62 615 434254 434253 F 554 0.00 1356 reject_low 8 ALIGNMENT 0 YS2-16c12.q1k chr08 697 842 116176 116175 F 146 0.00 1356 reject_low 4 ALIGNMENT 78 YS2-16c12.q1k chr08 616 696 116096 116176 F 81 98.77 1356 reject_low 4 ALIGNMENT 0 YS2-16c16.q1k vc_5 189 62 5064 5063 C 128 0.00 228 reject_low 5 ALIGNMENT 41 YS2-16c16.q1k vc_2 228 188 2105 2145 C 41 100.00 228 reject_low 2 ALIGNMENT 39 YS2-16c16.q1k vc_5 228 190 5025 5063 C 39 100.00 228 reject_low 5 ALIGNMENT 0 YS2-16c16.q1k vc_5 189 62 37 36 C 128 0.00 228 reject_low 7 ALIGNMENT 0 YS2-16c16.q1k vc_2 187 62 2146 2145 C 126 0.00 228 reject_low 2 ALIGNMENT 36 YS2-16c16.q1k vc_5 225 190 1 36 C 36 100.00 228 reject_low 7 ALIGNMENT 145 YS2-16c16.q1k chr11 38 187 14007 14156 F 150 100.00 228 accept 0 ALIGNMENT 41 YS2-16c16.q1k vc_4 188 228 5831 5871 F 41 100.00 228 reject_low 4 ALIGNMENT 41 YS2-16c16.q1k vc_1 228 188 2472 2512 C 41 100.00 228 reject_low 1 ALIGNMENT 0 YS2-16c16.q1k chr11 188 228 14156 14155 F 41 0.00 228 accept 0 ALIGNMENT 0 YS2-16c16.q1k vc_7 62 190 13525 13524 F 129 0.00 228 reject_low 6 ALIGNMENT 38 YS2-16c16.q1k vc_7 191 228 13525 13562 F 38 100.00 228 reject_low 6 ALIGNMENT 0 YS2-16c16.q1k vc_3 187 62 2513 2512 C 126 0.00 228 reject_low 3 ALIGNMENT 0 YS2-16c16.q1k vc_1 187 62 2513 2512 C 126 0.00 228 reject_low 1 ALIGNMENT 0 YS2-16c16.q1k vc_4 62 187 5831 5830 F 126 0.00 228 reject_low 4 ALIGNMENT 41 YS2-16c16.q1k vc_3 228 188 2472 2512 C 41 100.00 228 reject_low 3 ALIGNMENT 962 YS2-16c18.q1k chr02 35 1179 296167 297328 F 1145 96.68 1276 accept 0 ALIGNMENT 708 YS2-16c18.p1k chr04 1066 304 472160 472928 C 763 98.03 1360 reject_low 1 ALIGNMENT 0 YS2-16c18.p1k chr04 303 62 472929 472928 C 242 0.00 1360 reject_low 1 ALIGNMENT 964 YS2-16c18.p1k chr02 1066 32 300476 301518 C 1035 98.26 1360 accept 0 ALIGNMENT 751 YS2-16c19.q1k chr04 1268 40 646177 647418 C 1229 89.26 1307 ambiguous_trans 14 ALIGNMENT 1024 YS2-16c19.q1k chr15 39 1238 974320 975528 F 1200 97.25 1307 ambiguous_trans 10 ALIGNMENT 675 YS2-16c19.q1k chr10 40 1238 476377 477584 F 1199 87.57 1307 ambiguous_trans 18 ALIGNMENT 683 YS2-16c19.q1k chr01 1206 40 160989 162163 C 1167 88.43 1307 ambiguous_trans 19 ALIGNMENT 1010 YS2-16c19.q1k chr07 39 1268 815490 816732 F 1230 96.26 1307 ambiguous_trans 4 ALIGNMENT 721 YS2-16c19.q1k chr14 40 1268 523142 524383 F 1229 88.53 1307 ambiguous_trans 16 ALIGNMENT 1001 YS2-16c19.q1k chr04 1268 39 514363 515605 C 1230 96.02 1307 ambiguous_trans 7 ALIGNMENT 821 YS2-16c19.q1k chr12 917 39 976780 977658 C 879 99.66 1307 ambiguous_trans 13 ALIGNMENT 955 YS2-16c19.q1k chr04 39 1238 985203 986411 F 1200 95.33 1307 ambiguous_trans 12 ALIGNMENT 1007 YS2-16c19.q1k chr03 39 1268 88848 90090 F 1230 96.18 1307 ambiguous_trans 5 ALIGNMENT 1001 YS2-16c19.q1k chr14 1268 39 562712 563954 C 1230 96.02 1307 ambiguous_trans 8 ALIGNMENT 0 YS2-16c19.q1k chr05 114 62 494342 494341 C 53 0.00 1307 ambiguous_trans 25 ALIGNMENT 683 YS2-16c19.q1k chr16 1248 40 805344 806562 C 1209 87.76 1307 ambiguous_trans 17 ALIGNMENT 648 YS2-16c19.q1k chr16 1206 42 851376 852548 C 1165 87.47 1307 ambiguous_trans 22 ALIGNMENT 1010 YS2-16c19.q1k chr07 1268 39 569423 570665 C 1230 96.26 1307 ambiguous_trans 3 ALIGNMENT 456 YS2-16c19.q1k chr10 40 1130 481961 483052 F 1091 82.58 1307 ambiguous_trans 26 ALIGNMENT 1001 YS2-16c19.q1k chr15 1268 39 704743 705985 C 1230 96.02 1307 ambiguous_trans 9 ALIGNMENT 1004 YS2-16c19.q1k chr12 39 1268 945227 946469 F 1230 96.10 1307 ambiguous_trans 6 ALIGNMENT 660 YS2-16c19.q1k chr13 42 1206 188166 189338 F 1165 87.73 1307 ambiguous_trans 21 ALIGNMENT 629 YS2-16c19.q1k chr05 1206 40 444143 445317 C 1167 86.89 1307 ambiguous_trans 23 ALIGNMENT 1010 YS2-16c19.q1k chr06 39 1268 141946 143188 F 1230 96.26 1307 ambiguous_trans 2 ALIGNMENT 986 YS2-16c19.q1k chr02 39 1268 33679 34921 F 1230 95.61 1307 ambiguous_trans 11 ALIGNMENT 629 YS2-16c19.q1k chr13 40 1206 200331 201505 F 1167 86.80 1307 ambiguous_trans 24 ALIGNMENT 554 YS2-16c19.q1k chr05 1238 115 493209 494341 C 1124 85.14 1307 ambiguous_trans 25 ALIGNMENT 733 YS2-16c19.q1k chr04 1268 40 878978 880219 C 1229 88.77 1307 ambiguous_trans 15 ALIGNMENT 860 YS2-16c19.p1k chr11 1220 32 303633 304840 C 1189 93.36 1223 accept 0 ALIGNMENT 662 YS2-16c19.q1k chr16 40 1206 848411 849585 F 1167 87.75 1307 ambiguous_trans 20 ALIGNMENT 1013 YS2-16c19.q1k chr04 39 1268 875854 877096 F 1230 96.34 1307 ambiguous_trans 1 ALIGNMENT 410 YS2-16c20.q1k vc_7 551 1 2030 2569 C 551 92.92 698 reject_vc 2 ALIGNMENT 292 YS2-16c20.q1k vc_1 1 303 2689 2991 F 303 99.01 698 reject_vc 4 ALIGNMENT 292 YS2-16c20.q1k vc_2 1 303 2322 2624 F 303 99.01 698 reject_vc 5 ALIGNMENT 0 YS2-16c20.p1k chr04 410 428 223074 223073 F 19 0.00 428 accept 0 ALIGNMENT 62 YS2-16c20.q1k vc_4 304 238 46 112 C 67 98.51 698 reject_low 9 ALIGNMENT 0 YS2-16c20.q1k vc_7 313 304 4691 4921 C 10 0.00 698 reject_vc 7 ALIGNMENT 0 YS2-16c20.q1k vc_4 237 62 113 112 C 176 0.00 698 reject_low 9 ALIGNMENT 62 YS2-16c20.q1k vc_4 238 304 1548 1614 F 67 98.51 698 reject_vc 8 ALIGNMENT 82 YS2-16c20.q1k vc_7 415 314 4590 4690 C 102 95.10 698 reject_vc 7 ALIGNMENT 372 YS2-16c20.q1k vc_4 415 1 5239 5654 C 415 96.87 698 reject_vc 3 ALIGNMENT 363 YS2-16c20.p1k chr04 29 409 222693 223074 F 381 99.48 428 accept 0 ALIGNMENT 62 YS2-16c20.q1k vc_4 304 238 6273 6339 C 67 98.51 698 reject_low 10 ALIGNMENT 114 YS2-16c20.q1k vc_4 310 693 1880 2251 F 384 80.21 698 reject_vc 8 ALIGNMENT 0 YS2-16c20.q1k vc_4 305 309 1615 1879 F 5 0.00 698 reject_vc 8 ALIGNMENT 0 YS2-16c20.q1k vc_7 53 54 5172 6360 C 0 0.00 698 reject_vc 7 ALIGNMENT 0 YS2-16c20.q1k vc_4 62 237 1548 1547 F 176 0.00 698 reject_vc 8 ALIGNMENT 238 YS2-16c20.q1k vc_7 303 53 4922 5172 C 251 98.41 698|0,1 reject_vc 7 ALIGNMENT 413 YS2-16c20.q1k vc_5 1 697 2556 3239 F 697 88.38 698 reject_vc 1 ALIGNMENT 292 YS2-16c20.q1k vc_3 1 303 2689 2991 F 303 99.01 698 reject_vc 6 ALIGNMENT 51 YS2-16c20.q1k vc_7 54 3 6360 6411 C 52 100.00 698|1,0 reject_vc 7 ALIGNMENT 0 YS2-16c20.q1k vc_4 237 62 6340 6339 C 176 0.00 698 reject_low 10 ALIGNMENT 85 YS2-16c21.q1k chr16 166 45 942340 942461 C 122 95.08 1233 reject_low 4 ALIGNMENT 0 YS2-16c21.q1k chr12 253 62 1004123 1004122 C 192 0.00 1233 reject_low 2 ALIGNMENT 948 YS2-16c21.p1k chr08 36 1104 549883 550965 F 1069 97.66 1252 accept 0 ALIGNMENT 943 YS2-16c21.p1k chr01 36 1104 223238 224319 F 1069 97.57 1252 reject_low 1 ALIGNMENT 0 YS2-16c21.q1k chr01 217 62 229342 229341 C 156 0.00 1233 reject_low 1 ALIGNMENT 0 YS2-16c21.q1k chr13 62 263 162206 162205 F 202 0.00 1233 reject_low 3 ALIGNMENT 672 YS2-16c21.q1k chr01 1151 218 228390 229341 C 934 91.65 1233 reject_low 1 ALIGNMENT 0 YS2-16c21.q1k chr16 872 167 942341 942340 C 706 0.00 1233 reject_low 4 ALIGNMENT 430 YS2-16c21.q1k chr13 264 1086 162206 163038 F 823 84.69 1233 reject_low 3 ALIGNMENT 0 YS2-16c21.q1k chr09 79 872 7748 7747 F 794 0.00 1233 reject_low 5 ALIGNMENT 565 YS2-16c21.q1k chr12 1210 254 1003147 1004122 C 957 87.25 1233 reject_low 2 ALIGNMENT 27 YS2-16c21.q1k chr09 35 78 7705 7748 F 44 93.18 1233 reject_low 5 ALIGNMENT 942 YS2-16c21.q1k chr08 1210 35 554990 556184 C 1176 94.64 1233 accept 0 ALIGNMENT 1040 YS2-16c22.q1k chr11 41 1237 529097 530300 F 1197 96.24 1248 accept 0 ALIGNMENT 41 YS2-16c23.q1k vc_3 232 192 2472 2512 C 41 100.00 232 reject_low 4 ALIGNMENT 38 YS2-16c23.q1k vc_7 195 232 13525 13562 F 38 100.00 232 reject_low 7 ALIGNMENT 36 YS2-16c23.q1k vc_5 229 194 1 36 C 36 100.00 232 reject_low 8 ALIGNMENT 41 YS2-16c23.q1k vc_2 232 192 2105 2145 C 41 100.00 232 reject_low 3 ALIGNMENT 0 YS2-16c23.q1k vc_3 191 62 2513 2512 C 130 0.00 232 reject_low 4 ALIGNMENT 0 YS2-16c23.q1k vc_2 191 62 2146 2145 C 130 0.00 232 reject_low 3 ALIGNMENT 0 YS2-16c23.p1k chr16 187 204 255769 255768 F 18 0.00 204 accept_chi 0 ALIGNMENT 0 YS2-16c23.q1k vc_5 193 62 5064 5063 C 132 0.00 232 reject_low 6 ALIGNMENT 143 YS2-16c23.p1k chr16 31 186 255614 255769 F 156 98.72 204 accept_chi 0 ALIGNMENT 0 YS2-16c23.q1k vc_7 62 194 13525 13524 F 133 0.00 232 reject_low 7 ALIGNMENT 41 YS2-16c23.q1k vc_1 232 192 2472 2512 C 41 100.00 232 reject_low 2 ALIGNMENT 0 YS2-16c23.q1k vc_1 191 62 2513 2512 C 130 0.00 232 reject_low 2 ALIGNMENT 0 YS2-16c23.q1k vc_5 193 62 37 36 C 132 0.00 232 reject_low 8 ALIGNMENT 0 YS2-16c23.q1k chr16 232 194 255615 255614 C 39 0.00 232 accept_chi 1 ALIGNMENT 0 YS2-16c23.q1k vc_4 62 191 5831 5830 F 130 0.00 232 reject_low 5 ALIGNMENT 39 YS2-16c23.q1k vc_5 232 194 5025 5063 C 39 100.00 232 reject_low 6 ALIGNMENT 41 YS2-16c23.q1k vc_4 192 232 5831 5871 F 41 100.00 232 reject_low 5 ALIGNMENT 142 YS2-16c23.q1k chr16 193 39 255614 255768 C 155 98.71 232 accept_chi 1 ALIGNMENT 837 YS2-16c24.p1k chr04 1109 29 464275 465319 C 1081 94.08 1151 accept 0 ALIGNMENT 964 YS2-16d01.p1k chr12 1215 43 727230 728392 C 1173 95.23 1325 accept 0 ALIGNMENT 1028 YS2-16d01.q1k chr12 38 1212 727086 728269 F 1175 96.43 1316 accept 0 ALIGNMENT 969 YS2-16d02.p1k chr04 1287 39 935588 936829 C 1249 93.67 1307 accept 0 ALIGNMENT 929 YS2-16d02.q1k chr04 32 1116 934371 935473 F 1085 96.96 1268 accept 0 ALIGNMENT 0 YS2-16d03.p1k vc_1 795 92 2473 2472 C 704 0.00 1313 reject_low 24 ALIGNMENT 0 YS2-16d03.p1k vc_3 795 92 2473 2472 C 704 0.00 1313 reject_low 25 ALIGNMENT 0 YS2-16d03.q1k vc_3 62 821 2531 2530 F 760 0.00 1325 reject_low 14 ALIGNMENT 184 YS2-16d03.p1k vc_5 1191 796 4623 5025 C 396 83.59 1313 reject_low 4 ALIGNMENT 0 YS2-16d03.q1k vc_2 781 62 2146 2145 C 720 0.00 1325 reject_low 19 ALIGNMENT 0 YS2-16d03.q1k vc_4 62 781 5831 5830 F 720 0.00 1325 reject_low 16 ALIGNMENT 0 YS2-16d03.q1k vc_2 62 821 2164 2163 F 760 0.00 1325 reject_low 13 ALIGNMENT 0 YS2-16d03.q1k vc_4 823 822 5872 6353 F 0 0.00 1325 reject_low 16 ALIGNMENT 229 YS2-16d03.q1k vc_7 1197 822 2347 2727 C 376 88.30 1325 reject_low 5 ALIGNMENT 0 YS2-16d03.q1k vc_2 848 823 2106 2105 C 26 0.00 1325 reject_low 19 ALIGNMENT 418 YS2-16d03.p1k chr07 33 777 387143 387887 F 745 85.91 1313 reject_low 3 ALIGNMENT 0 YS2-16d03.p1k vc_2 795 92 2106 2105 C 704 0.00 1313 reject_low 7 ALIGNMENT 0 YS2-16d03.p1k vc_7 92 795 100 99 F 704 0.00 1313 reject_low 5 ALIGNMENT 724 YS2-16d03.q1k chr02 36 781 659553 660299 F 746 99.46 1325 accept_chi 0 ALIGNMENT 0 YS2-16d03.q1k vc_7 62 784 13525 13524 F 723 0.00 1325 reject_low 22 ALIGNMENT 0 YS2-16d03.q1k vc_7 823 848 13562 13561 F 26 0.00 1325 reject_low 22 ALIGNMENT 252 YS2-16d03.q1k vc_5 822 1322 2398 2904 F 501 84.63 1325 reject_low 4 ALIGNMENT 0 YS2-16d03.q1k vc_7 821 62 2728 2727 C 760 0.00 1325 reject_low 5 ALIGNMENT 129 YS2-16d03.q1k vc_4 822 980 126 287 F 159 94.97 1325 reject_low 15 ALIGNMENT 0 YS2-16d03.q1k vc_1 848 823 2473 2472 C 26 0.00 1325 reject_low 18 ALIGNMENT 38 YS2-16d03.q1k vc_7 785 822 13525 13562 F 38 100.00 1325 reject_low 22 ALIGNMENT 0 YS2-16d03.q1k vc_1 781 62 2513 2512 C 720 0.00 1325 reject_low 18 ALIGNMENT 247 YS2-16d03.q1k vc_4 1322 822 5304 5812 C 501 84.43 1325 reject_low 11 ALIGNMENT 0 YS2-16d03.p1k vc_4 92 795 5871 5870 F 704 0.00 1313 reject_low 10 ALIGNMENT 184 YS2-16d03.p1k vc_7 796 1191 100 502 F 396 83.59 1313 reject_low 5 ALIGNMENT 716 YS2-16d03.p1k chr02 777 32 659553 660298 C 746 99.20 1313 accept_chi 1 ALIGNMENT 0 YS2-16d03.q1k vc_5 848 823 5026 5025 C 26 0.00 1325 reject_low 21 ALIGNMENT 0 YS2-16d03.q1k vc_4 821 62 5813 5812 C 760 0.00 1325 reject_low 11 ALIGNMENT 0 YS2-16d03.q1k vc_4 821 62 1535 1534 C 760 0.00 1325 reject_low 17 ALIGNMENT 0 YS2-16d03.q1k vc_3 781 62 2513 2512 C 720 0.00 1325 reject_low 20 ALIGNMENT 429 YS2-16d03.q1k chr07 779 40 387143 387882 C 740 86.35 1325 reject_low 2 ALIGNMENT 0 YS2-16d03.q1k vc_5 848 820 2 1 C 29 0.00 1325 reject_low 23 ALIGNMENT 0 YS2-16d03.q1k chr07 848 780 387144 387143 C 69 0.00 1325 reject_low 2 ALIGNMENT 23 YS2-16d03.p1k vc_3 826 796 2441 2472 C 31 93.55 1313 reject_low 25 ALIGNMENT 184 YS2-16d03.p1k vc_2 1191 796 1703 2105 C 396 83.59 1313 reject_low 7 ALIGNMENT 41 YS2-16d03.q1k vc_4 782 822 5831 5871 F 41 100.00 1325 reject_low 16 ALIGNMENT 23 YS2-16d03.p1k vc_1 826 796 2441 2472 C 31 93.55 1313 reject_low 24 ALIGNMENT 240 YS2-16d03.q1k vc_1 822 1274 2531 2989 F 453 85.43 1325 reject_low 12 ALIGNMENT 41 YS2-16d03.q1k vc_2 822 782 2105 2145 C 41 100.00 1325 reject_low 19 ALIGNMENT 0 YS2-16d03.q1k vc_4 62 821 126 125 F 760 0.00 1325 reject_low 15 ALIGNMENT 39 YS2-16d03.q1k vc_5 822 784 5025 5063 C 39 100.00 1325 reject_low 21 ALIGNMENT 184 YS2-16d03.p1k vc_7 796 1191 13562 13964 F 396 83.59 1313 reject_low 9 ALIGNMENT 184 YS2-16d03.p1k vc_3 1191 796 1703 2105 C 396 83.59 1313 reject_low 8 ALIGNMENT 240 YS2-16d03.q1k vc_2 822 1274 2164 2622 F 453 85.43 1325 reject_low 13 ALIGNMENT 0 YS2-16d03.q1k vc_1 62 821 2531 2530 F 760 0.00 1325 reject_low 12 ALIGNMENT 171 YS2-16d03.p1k vc_4 796 1136 5871 6218 F 341 85.04 1313 reject_low 10 ALIGNMENT 36 YS2-16d03.q1k vc_5 819 784 1 36 C 36 100.00 1325 reject_low 23 ALIGNMENT 41 YS2-16d03.q1k vc_3 822 782 2472 2512 C 41 100.00 1325 reject_low 20 ALIGNMENT 0 YS2-16d03.q1k vc_5 62 821 2398 2397 F 760 0.00 1325 reject_low 4 ALIGNMENT 184 YS2-16d03.p1k vc_1 1191 796 1703 2105 C 396 83.59 1313 reject_low 6 ALIGNMENT 0 YS2-16d03.q1k vc_5 783 62 37 36 C 722 0.00 1325 reject_low 23 ALIGNMENT 41 YS2-16d03.q1k vc_1 822 782 2472 2512 C 41 100.00 1325 reject_low 18 ALIGNMENT 76 YS2-16d03.q1k vc_4 909 822 1446 1534 C 88 96.59 1325 reject_low 17 ALIGNMENT 0 YS2-16d03.p1k vc_5 795 92 5026 5025 C 704 0.00 1313 reject_low 4 ALIGNMENT 0 YS2-16d03.q1k vc_5 783 62 5064 5063 C 722 0.00 1325 reject_low 21 ALIGNMENT 240 YS2-16d03.q1k vc_3 822 1274 2531 2989 F 453 85.43 1325 reject_low 14 ALIGNMENT 0 YS2-16d03.q1k chr02 782 848 660299 660298 F 67 0.00 1325 accept_chi 0 ALIGNMENT 0 YS2-16d03.p1k vc_1 795 92 2106 2105 C 704 0.00 1313 reject_low 6 ALIGNMENT 129 YS2-16d03.q1k vc_4 822 980 6353 6514 F 159 94.97 1325|1,0 reject_low 16 ALIGNMENT 0 YS2-16d03.q1k vc_3 848 823 2473 2472 C 26 0.00 1325 reject_low 20 ALIGNMENT 0 YS2-16d03.p1k vc_3 795 92 2106 2105 C 704 0.00 1313 reject_low 8 ALIGNMENT 0 YS2-16d03.p1k vc_7 92 795 13562 13561 F 704 0.00 1313 reject_low 9 ALIGNMENT 611 YS2-16d04.q1k vc_5 1 830 2556 3401 F 830 92.05 879 reject_vc 0 ALIGNMENT 0 YS2-16d04.q1k vc_7 53 54 5172 6360 C 0 0.00 879 reject_low 12 ALIGNMENT 452 YS2-16d04.p1k vc_6 1 659 3712 4376 F 659 90.90 694 reject_low 2 ALIGNMENT 65 YS2-16d04.q1k vc_4 304 238 46 112 C 67 100.00 879 reject_low 13 ALIGNMENT 302 YS2-16d04.q1k vc_1 1 303 2689 2991 F 303 100.00 879 reject_low 9 ALIGNMENT 449 YS2-16d04.p1k vc_1 659 1 1085 1749 C 659 90.14 694 reject_low 3 ALIGNMENT 443 YS2-16d04.p1k vc_7 1 659 13918 14582 F 659 90.44 694 reject_low 6 ALIGNMENT 51 YS2-16d04.q1k vc_7 54 3 6360 6411 C 52 100.00 879|1,0 reject_low 12 ALIGNMENT 0 YS2-16d04.q1k vc_1 304 418 2991 2990 F 115 0.00 879 reject_low 9 ALIGNMENT 0 YS2-16d04.q1k vc_4 237 62 6340 6339 C 176 0.00 879 reject_low 14 ALIGNMENT 413 YS2-16d04.q1k vc_4 421 1 5232 5654 C 421 99.52 879 reject_low 8 ALIGNMENT 449 YS2-16d04.p1k vc_3 659 1 1085 1749 C 659 90.14 694 reject_low 5 ALIGNMENT 0 YS2-16d04.q1k vc_2 304 418 2624 2623 F 115 0.00 879 reject_low 10 ALIGNMENT 449 YS2-16d04.p1k vc_2 659 1 1085 1749 C 659 90.14 694 reject_low 4 ALIGNMENT 300 YS2-16d04.q1k vc_4 308 830 1879 2417 F 523 87.19 879 reject_low 7 ALIGNMENT 302 YS2-16d04.q1k vc_2 1 303 2322 2624 F 303 100.00 879 reject_low 10 ALIGNMENT 443 YS2-16d04.p1k vc_7 1 659 456 1120 F 659 90.44 694 reject_low 1 ALIGNMENT 65 YS2-16d04.q1k vc_4 304 238 6273 6339 C 67 100.00 879 reject_low 14 ALIGNMENT 0 YS2-16d04.q1k vc_4 62 237 1548 1547 F 176 0.00 879 reject_low 7 ALIGNMENT 247 YS2-16d04.q1k vc_7 303 53 4922 5172 C 251 99.60 879|0,1 reject_low 12 ALIGNMENT 0 YS2-16d04.q1k vc_3 304 418 2991 2990 F 115 0.00 879 reject_low 11 ALIGNMENT 0 YS2-16d04.q1k vc_7 304 304 4700 4921 C 1 0.00 879 reject_low 12 ALIGNMENT 0 YS2-16d04.q1k vc_4 418 305 6274 6273 C 114 0.00 879 reject_low 14 ALIGNMENT 0 YS2-16d04.q1k vc_4 237 62 113 112 C 176 0.00 879 reject_low 13 ALIGNMENT 115 YS2-16d04.q1k vc_7 421 305 4583 4699 C 117 100.00 879 reject_low 12 ALIGNMENT 452 YS2-16d04.p1k vc_5 659 1 4005 4669 C 659 90.29 694 reject_vc 0 ALIGNMENT 0 YS2-16d04.q1k vc_4 418 305 47 46 C 114 0.00 879 reject_low 13 ALIGNMENT 0 YS2-16d04.q1k vc_4 305 307 1615 1878 F 3 0.00 879 reject_low 7 ALIGNMENT 65 YS2-16d04.q1k vc_4 238 304 1548 1614 F 67 100.00 879 reject_low 7 ALIGNMENT 604 YS2-16d04.q1k vc_7 717 1 1845 2569 C 717 95.26 879 reject_low 1 ALIGNMENT 302 YS2-16d04.q1k vc_3 1 303 2689 2991 F 303 100.00 879 reject_low 11 ALIGNMENT 0 YS2-16d06.p1k chr05 383 365 419998 419997 C 19 0.00 383 accept_chi 0 ALIGNMENT 0 YS2-16d06.q1k vc_4 62 362 5832 5831 F 301 0.00 402 reject_low 4 ALIGNMENT 39 YS2-16d06.q1k vc_5 402 364 5025 5063 C 39 100.00 402 reject_low 5 ALIGNMENT 40 YS2-16d06.q1k vc_1 402 363 2472 2511 C 40 100.00 402 reject_low 2 ALIGNMENT 311 YS2-16d06.p1k chr05 364 30 419997 420332 C 335 97.91 383 accept_chi 0 ALIGNMENT 0 YS2-16d06.q1k vc_1 362 62 2512 2511 C 301 0.00 402 reject_low 2 ALIGNMENT 0 YS2-16d06.q1k vc_3 362 62 2512 2511 C 301 0.00 402 reject_low 3 ALIGNMENT 0 YS2-16d06.q1k vc_7 62 364 13525 13524 F 303 0.00 402 reject_low 6 ALIGNMENT 0 YS2-16d06.q1k chr05 364 402 420332 420331 F 39 0.00 402 accept_chi 1 ALIGNMENT 311 YS2-16d06.q1k chr05 29 363 419997 420332 F 335 97.91 402 accept_chi 1 ALIGNMENT 38 YS2-16d06.q1k vc_7 365 402 13525 13562 F 38 100.00 402 reject_low 6 ALIGNMENT 36 YS2-16d06.q1k vc_5 399 364 1 36 C 36 100.00 402 reject_low 7 ALIGNMENT 0 YS2-16d06.q1k vc_5 363 62 5064 5063 C 302 0.00 402 reject_low 5 ALIGNMENT 40 YS2-16d06.q1k vc_4 363 402 5832 5871 F 40 100.00 402 reject_low 4 ALIGNMENT 0 YS2-16d06.q1k vc_5 363 62 37 36 C 302 0.00 402 reject_low 7 ALIGNMENT 40 YS2-16d06.q1k vc_3 402 363 2472 2511 C 40 100.00 402 reject_low 3 ALIGNMENT 798 YS2-16d07.q1k chr16 1065 31 408223 409237 C 1035 94.20 1366 accept 0 ALIGNMENT 307 YS2-16d07.p1k chr02 374 934 604933 605493 F 561 85.20 1315 reject_low 1 ALIGNMENT 540 YS2-16d07.p1k chr16 106 1040 405197 406134 F 935 86.74 1315 accept 0 ALIGNMENT 290 YS2-16d09.q1k vc_5 2 504 2557 3059 F 503 86.68 1005 reject_vc 0 ALIGNMENT 180 YS2-16d09.q1k vc_7 303 53 4923 5172 C 251 90.84 1005 reject_low 6 ALIGNMENT 290 YS2-16d09.q1k vc_7 504 2 2066 2568 C 503 86.68 1005 reject_vc 1 ALIGNMENT 222 YS2-16d09.q1k vc_3 2 303 2690 2990 F 302 91.39 1005 reject_low 5 ALIGNMENT 0 YS2-16d09.q1k vc_7 315 304 4690 4922 C 12 0.00 1005 reject_low 6 ALIGNMENT 42 YS2-16d09.q1k vc_7 415 316 4591 4689 C 100 82.00 1005 reject_low 6 ALIGNMENT 222 YS2-16d09.q1k vc_2 2 303 2323 2623 F 302 91.39 1005 reject_low 4 ALIGNMENT 69 YS2-16d09.q1k vc_4 316 504 1886 2075 F 189 80.95 1005 reject_low 7 ALIGNMENT 222 YS2-16d09.q1k vc_1 2 303 2690 2990 F 302 91.39 1005 reject_low 3 ALIGNMENT 255 YS2-16d09.q1k vc_4 415 2 5240 5653 C 414 87.68 1005 reject_low 2 ALIGNMENT 796 YS2-16d10.q1k chr03 30 1120 211391 212477 F 1091 92.30 1342 reject_bad_break 0 ALIGNMENT 815 YS2-16d10.p1k chr03 963 31 211613 212564 C 933 96.14 1315 reject_bad_break 0 ALIGNMENT 31 YS2-16d10.p1k chr03 1125 990 211467 211602 C 136 78.68 1315 reject_bad_break 0 ALIGNMENT 0 YS2-16d10.p1k chr03 989 964 211603 211612 C 26 0.00 1315 reject_bad_break 0 ALIGNMENT 1047 YS2-16d11.q1k chr08 41 1354 305526 306818 F 1314 95.05 1437 accept 0 ALIGNMENT 997 YS2-16d11.p1k chr08 1257 33 309815 311046 C 1225 95.67 1435 accept 0 ALIGNMENT 937 YS2-16d12.q1k chr02 1074 33 377041 378097 C 1042 97.60 1300 accept 0 ALIGNMENT 1070 YS2-16d12.p1k chr02 32 1278 376700 377962 F 1247 96.55 1436 accept 0 ALIGNMENT 0 YS2-16d12.q1k chr04 865 481 549803 549802 C 385 0.00 1300 reject_low 1 ALIGNMENT 0 YS2-16d12.q1k chr04 241 62 550044 550043 C 180 0.00 1300 reject_low 1 ALIGNMENT 20 YS2-16d12.q1k chr04 306 242 549979 550043 C 65 76.92 1300 reject_low 1 ALIGNMENT 26 YS2-16d12.q1k chr04 480 389 549802 549893 C 92 77.17 1300 reject_low 1 ALIGNMENT 0 YS2-16d12.q1k chr04 388 307 549894 549978 C 82 0.00 1300 reject_low 1 ALIGNMENT 395 YS2-16d14.p1k vc_5 604 1 4063 4669 C 604 89.24 642 reject_vc 1 ALIGNMENT 36 YS2-16d14.q1k vc_5 301 266 1 36 C 36 100.00 304 reject_low 13 ALIGNMENT 392 YS2-16d14.p1k vc_3 604 1 1143 1749 C 604 89.07 642 reject_vc 4 ALIGNMENT 0 YS2-16d14.q1k vc_1 262 62 2514 2513 C 201 0.00 304 reject_low 8 ALIGNMENT 0 YS2-16d14.q1k vc_5 265 62 37 36 C 204 0.00 304 reject_low 13 ALIGNMENT 0 YS2-16d14.q1k vc_3 262 62 2514 2513 C 201 0.00 304 reject_low 9 ALIGNMENT 0 YS2-16d14.q1k vc_4 62 262 5830 5829 F 201 0.00 304 reject_low 10 ALIGNMENT 0 YS2-16d14.q1k chr15 264 304 437548 437547 F 41 0.00 304 accept 0 ALIGNMENT 39 YS2-16d14.q1k vc_5 304 266 5025 5063 C 39 100.00 304 reject_low 11 ALIGNMENT 392 YS2-16d14.p1k vc_1 604 1 1143 1749 C 604 89.07 642 reject_vc 2 ALIGNMENT 378 YS2-16d14.p1k vc_6 1 565 3712 4280 F 565 89.73 642 reject_vc 7 ALIGNMENT 386 YS2-16d14.p1k vc_7 1 604 456 1062 F 604 88.74 642 reject_vc 5 ALIGNMENT 42 YS2-16d14.q1k vc_1 304 263 2472 2513 C 42 100.00 304 reject_low 8 ALIGNMENT 38 YS2-16d14.q1k vc_7 267 304 13525 13562 F 38 100.00 304 reject_low 12 ALIGNMENT 0 YS2-16d14.q1k vc_5 265 62 5064 5063 C 204 0.00 304 reject_low 11 ALIGNMENT 42 YS2-16d14.q1k vc_3 304 263 2472 2513 C 42 100.00 304 reject_low 9 ALIGNMENT 211 YS2-16d14.q1k chr15 27 263 437312 437548 F 237 97.89 304 accept 0 ALIGNMENT 0 YS2-16d14.q1k vc_7 62 266 13525 13524 F 205 0.00 304 reject_low 12 ALIGNMENT 386 YS2-16d14.p1k vc_7 1 604 13918 14524 F 604 88.74 642 reject_vc 6 ALIGNMENT 392 YS2-16d14.p1k vc_2 604 1 1143 1749 C 604 89.07 642 reject_vc 3 ALIGNMENT 42 YS2-16d14.q1k vc_4 263 304 5830 5871 F 42 100.00 304 reject_low 10 ALIGNMENT 1079 YS2-16d15.p1k chr09 1301 31 243964 245230 C 1271 95.83 1312 accept 0 ALIGNMENT 294 YS2-16d15.q1k chr05 642 34 299574 300182 C 609 83.09 1352 reject_low 1 ALIGNMENT 1087 YS2-16d15.q1k chr09 30 1255 239467 240695 F 1226 96.74 1352 accept 0 ALIGNMENT 0 YS2-16d15.q1k chr05 882 643 299575 299574 C 240 0.00 1352 reject_low 1 ALIGNMENT 0 YS2-16d16.q1k vc_4 62 186 5831 5830 F 125 0.00 227 reject_low 11 ALIGNMENT 41 YS2-16d16.q1k vc_1 227 187 2472 2512 C 41 100.00 227 reject_low 8 ALIGNMENT 459 YS2-16d16.p1k vc_7 1 724 456 1170 F 724 89.64 739 reject_vc 5 ALIGNMENT 38 YS2-16d16.q1k vc_7 190 227 13525 13562 F 38 100.00 227 reject_low 13 ALIGNMENT 41 YS2-16d16.q1k vc_2 227 187 2105 2145 C 41 100.00 227 reject_low 9 ALIGNMENT 465 YS2-16d16.p1k vc_3 724 1 1035 1749 C 724 89.92 739 reject_vc 4 ALIGNMENT 39 YS2-16d16.q1k vc_5 227 189 5025 5063 C 39 100.00 227 reject_low 12 ALIGNMENT 0 YS2-16d16.q1k vc_2 186 62 2146 2145 C 125 0.00 227 reject_low 9 ALIGNMENT 465 YS2-16d16.p1k vc_1 724 1 1035 1749 C 724 89.92 739 reject_vc 2 ALIGNMENT 0 YS2-16d16.q1k chr11 187 227 14156 14155 F 41 0.00 227 ambiguous_tel 7 ALIGNMENT 465 YS2-16d16.p1k vc_2 724 1 1035 1749 C 724 89.92 739 reject_vc 3 ALIGNMENT 145 YS2-16d16.q1k chr11 37 186 14007 14156 F 150 100.00 227 ambiguous_tel 7 ALIGNMENT 468 YS2-16d16.p1k vc_6 1 724 3712 4426 F 724 90.06 739 reject_vc 1 ALIGNMENT 0 YS2-16d16.q1k vc_3 186 62 2513 2512 C 125 0.00 227 reject_low 10 ALIGNMENT 459 YS2-16d16.p1k vc_7 1 724 13918 14632 F 724 89.64 739 reject_vc 6 ALIGNMENT 468 YS2-16d16.p1k vc_5 724 1 3955 4669 C 724 90.06 739 reject_vc 0 ALIGNMENT 0 YS2-16d16.q1k vc_5 188 62 5064 5063 C 127 0.00 227 reject_low 12 ALIGNMENT 36 YS2-16d16.q1k vc_5 224 189 1 36 C 36 100.00 227 reject_low 14 ALIGNMENT 0 YS2-16d16.q1k vc_5 188 62 37 36 C 127 0.00 227 reject_low 14 ALIGNMENT 41 YS2-16d16.q1k vc_3 227 187 2472 2512 C 41 100.00 227 reject_low 10 ALIGNMENT 41 YS2-16d16.q1k vc_4 187 227 5831 5871 F 41 100.00 227 reject_low 11 ALIGNMENT 0 YS2-16d16.q1k vc_1 186 62 2513 2512 C 125 0.00 227 reject_low 8 ALIGNMENT 0 YS2-16d16.q1k vc_7 62 189 13525 13524 F 128 0.00 227 reject_low 13 ALIGNMENT 947 YS2-16d17.p1k chr02 31 1222 565241 566446 F 1192 94.80 1426 accept 0 ALIGNMENT 1032 YS2-16d17.q1k chr02 1278 43 566358 567596 C 1236 95.79 1312 accept 0 ALIGNMENT 550 YS2-16d18.p1k chr04 924 35 220635 221520 C 890 88.65 1434 accept 0 ALIGNMENT 649 YS2-16d18.q1k chr04 28 1009 219513 220498 F 982 89.51 1283 accept 0 ALIGNMENT 438 YS2-16d18.q1k chr04 177 1009 123868 124702 F 833 84.87 1283 reject_low 1 ALIGNMENT 1029 YS2-16d19.p1k chr14 1240 26 201449 202664 C 1215 96.05 1243 accept 0 ALIGNMENT 1007 YS2-16d19.q1k chr14 31 1261 197555 198794 F 1231 94.31 1300 accept 0 ALIGNMENT 334 YS2-16d21.p1k chr02 58 428 105158 105528 F 371 97.84 447 accept_chi 0 ALIGNMENT 20 YS2-16d21.q1k vc_4 18 37 5812 5831 F 20 100.00 446 reject_low 8 ALIGNMENT 0 YS2-16d21.q1k vc_1 405 38 2513 2511 C 368 0.00 446 reject_low 5 ALIGNMENT 0 YS2-16d21.q1k vc_7 62 408 13525 13524 F 347 0.00 446 reject_low 3 ALIGNMENT 24 YS2-16d21.q1k vc_5 41 18 2375 2398 C 24 100.00 446 reject_low 4 ALIGNMENT 0 YS2-16d21.q1k vc_3 405 38 2513 2511 C 368 0.00 446 reject_low 7 ALIGNMENT 0 YS2-16d21.q1k vc_2 405 38 2146 2144 C 368 0.00 446 reject_low 6 ALIGNMENT 41 YS2-16d21.q1k vc_1 446 406 2472 2512 C 41 100.00 446 reject_low 5 ALIGNMENT 334 YS2-16d21.q1k chr02 407 37 105158 105528 C 371 97.84 446 accept_chi 1 ALIGNMENT 20 YS2-16d21.q1k vc_1 37 18 2512 2531 C 20 100.00 446 reject_low 5 ALIGNMENT 20 YS2-16d21.q1k vc_2 37 18 2145 2164 C 20 100.00 446 reject_low 6 ALIGNMENT 38 YS2-16d21.q1k vc_7 409 446 13525 13562 F 38 100.00 446 reject_low 3 ALIGNMENT 0 YS2-16d21.p1k chr02 429 447 105528 105527 F 19 0.00 447 accept_chi 0 ALIGNMENT 40 YS2-16d21.q1k vc_5 446 404 5025 5067 C 43 97.67 446 reject_low 2 ALIGNMENT 20 YS2-16d21.q1k vc_3 37 18 2512 2531 C 20 100.00 446 reject_low 7 ALIGNMENT 41 YS2-16d21.q1k vc_2 446 406 2105 2145 C 41 100.00 446 reject_low 6 ALIGNMENT 0 YS2-16d21.q1k chr02 446 408 105159 105158 C 39 0.00 446 accept_chi 1 ALIGNMENT 0 YS2-16d21.q1k vc_5 403 42 41 2374 C 362 0.00 446 reject_low 4 ALIGNMENT 0 YS2-16d21.q1k vc_4 38 405 5832 5830 F 368 0.00 446 reject_low 8 ALIGNMENT 37 YS2-16d21.q1k vc_5 443 404 1 40 C 40 97.50 446 reject_low 4 ALIGNMENT 41 YS2-16d21.q1k vc_3 446 406 2472 2512 C 41 100.00 446 reject_low 7 ALIGNMENT 41 YS2-16d21.q1k vc_4 406 446 5831 5871 F 41 100.00 446 reject_low 8 ALIGNMENT 0 YS2-16d21.q1k vc_5 403 62 5068 5067 C 342 0.00 446 reject_low 2 ALIGNMENT 0 YS2-16d22.p1k scplasm1 62 1127 5 4 F 1066 0.00 1279 accept 0 ALIGNMENT 48 YS2-16d22.p1k scplasm1 1128 1262 5 149 F 135 82.22 1279 accept 0 ALIGNMENT 712 YS2-16d22.p1k vc_6 384 1262 5263 6160 F 879 95.45 1279 reject_low 2 ALIGNMENT 0 YS2-16d22.p1k vc_6 62 383 5263 5262 F 322 0.00 1279 reject_low 2 ALIGNMENT 998 YS2-16d22.p1k scplasm1 35 1124 5222 6318 F 1090 98.53 1279 reject_low 1 ALIGNMENT 766 YS2-16d22.q1k scplasm1 1249 42 1710 2923 C 1208 88.66 1252 accept 0 ALIGNMENT 39 YS2-16d23.p1k chrm 240 197 52327 52370 C 44 100.00 1249 reject_low 12 ALIGNMENT 143 YS2-16d23.p1k vc_4 601 856 5871 6124 F 256 86.33 1249 reject_low 4 ALIGNMENT 0 YS2-16d23.p1k chrm 583 637 83511 83510 F 55 0.00 1249 accept 0 ALIGNMENT 0 YS2-16d23.p1k vc_7 212 600 100 99 F 389 0.00 1249 reject_low 6 ALIGNMENT 20 YS2-16d23.p1k vc_5 579 601 2376 2398 F 23 95.65 1249 reject_low 8 ALIGNMENT 143 YS2-16d23.p1k vc_7 601 856 100 353 F 256 86.33 1249 reject_low 6 ALIGNMENT 0 YS2-16d23.p1k chrm 637 241 52328 52327 C 397 0.00 1249 reject_low 12 ALIGNMENT 0 YS2-16d23.p1k vc_5 600 212 5026 5025 C 389 0.00 1249 reject_low 5 ALIGNMENT 143 YS2-16d23.p1k vc_5 856 601 4772 5025 C 256 86.33 1249 reject_low 5 ALIGNMENT 59 YS2-16d23.p1k chrm 485 582 83414 83511 F 98 96.94 1249 accept 0 ALIGNMENT 0 YS2-16d23.p1k chrm 250 637 46370 46369 F 388 0.00 1249 reject_low 9 ALIGNMENT 143 YS2-16d23.p1k vc_2 856 601 1852 2105 C 256 86.33 1249 reject_low 2 ALIGNMENT 0 YS2-16d23.p1k vc_2 600 212 2106 2105 C 389 0.00 1249 reject_low 2 ALIGNMENT 0 YS2-16d23.p1k vc_5 212 578 2376 2375 F 367 0.00 1249 reject_low 8 ALIGNMENT 26 YS2-16d23.p1k vc_1 631 601 2441 2472 C 31 96.77 1249 reject_low 10 ALIGNMENT 29 YS2-16d23.p1k chrm 267 491 82633 82857 F 225 80.00 1249 reject_low 14 ALIGNMENT 0 YS2-16d23.p1k chrm 238 637 53870 53869 F 400 0.00 1249 reject_low 13 ALIGNMENT 143 YS2-16d23.p1k vc_3 856 601 1852 2105 C 256 86.33 1249 reject_low 3 ALIGNMENT 0 YS2-16d23.p1k chrm 241 266 81451 82632 F 26 0.00 1249 reject_low 14 ALIGNMENT 0 YS2-16d23.p1k vc_1 600 212 2473 2472 C 389 0.00 1249 reject_low 10 ALIGNMENT 143 YS2-16d23.p1k vc_1 856 601 1852 2105 C 256 86.33 1249 reject_low 1 ALIGNMENT 0 YS2-16d23.p1k vc_7 212 600 13562 13561 F 389 0.00 1249 reject_low 7 ALIGNMENT 0 YS2-16d23.p1k chrm 484 484 83350 83413 F 1 0.00 1249 accept 0 ALIGNMENT 43 YS2-16d23.p1k chrm 187 249 46308 46370 F 63 90.48 1249 reject_low 9 ALIGNMENT 0 YS2-16d23.p1k vc_1 600 212 2106 2105 C 389 0.00 1249 reject_low 1 ALIGNMENT 0 YS2-16d23.p1k vc_3 600 212 2106 2105 C 389 0.00 1249 reject_low 3 ALIGNMENT 0 YS2-16d23.p1k vc_3 600 212 2473 2472 C 389 0.00 1249 reject_low 11 ALIGNMENT 35 YS2-16d23.p1k chrm 197 237 53830 53870 F 41 100.00 1249 reject_low 13 ALIGNMENT 0 YS2-16d23.p1k vc_5 602 637 2398 2397 F 36 0.00 1249 reject_low 8 ALIGNMENT 39 YS2-16d23.p1k chrm 197 240 81407 81450 F 44 100.00 1249 reject_low 14 ALIGNMENT 26 YS2-16d23.p1k vc_3 631 601 2441 2472 C 31 96.77 1249 reject_low 11 ALIGNMENT 0 YS2-16d23.p1k vc_4 212 600 5871 5870 F 389 0.00 1249 reject_low 4 ALIGNMENT 143 YS2-16d23.p1k vc_7 601 856 13562 13815 F 256 86.33 1249 reject_low 7 ALIGNMENT 228 YS2-16d23.p1k chrm 155 483 83015 83349 F 329 94.22 1249 accept 0 ALIGNMENT 0 YS2-16d23.p1k chrm 492 637 82857 82856 F 146 0.00 1249 reject_low 14 ALIGNMENT 36 YS2-16d24.q1k vc_5 527 492 1 36 C 36 100.00 530 reject_low 8 ALIGNMENT 0 YS2-16d24.q1k vc_4 62 489 5831 5830 F 428 0.00 530 reject_low 5 ALIGNMENT 38 YS2-16d24.q1k vc_7 493 530 13525 13562 F 38 100.00 530 reject_low 7 ALIGNMENT 0 YS2-16d24.q1k vc_5 491 62 37 36 C 430 0.00 530 reject_low 8 ALIGNMENT 0 YS2-16d24.q1k vc_3 489 62 2513 2512 C 428 0.00 530 reject_low 4 ALIGNMENT 39 YS2-16d24.q1k vc_5 530 492 5025 5063 C 39 100.00 530 reject_low 6 ALIGNMENT 0 YS2-16d24.q1k vc_7 62 492 13525 13524 F 431 0.00 530 reject_low 7 ALIGNMENT 0 YS2-16d24.p1k chr16 510 493 371106 371105 C 18 0.00 510 accept_chi 0 ALIGNMENT 0 YS2-16d24.q1k vc_2 489 62 2146 2145 C 428 0.00 530 reject_low 3 ALIGNMENT 0 YS2-16d24.q1k vc_5 491 62 5064 5063 C 430 0.00 530 reject_low 6 ALIGNMENT 443 YS2-16d24.p1k chr16 492 32 371105 371566 C 461 99.35 510 accept_chi 0 ALIGNMENT 41 YS2-16d24.q1k vc_1 530 490 2472 2512 C 41 100.00 530 reject_low 2 ALIGNMENT 0 YS2-16d24.q1k chr16 491 530 371566 371565 F 40 0.00 530 accept_chi 1 ALIGNMENT 41 YS2-16d24.q1k vc_3 530 490 2472 2512 C 41 100.00 530 reject_low 4 ALIGNMENT 41 YS2-16d24.q1k vc_2 530 490 2105 2145 C 41 100.00 530 reject_low 3 ALIGNMENT 0 YS2-16d24.q1k vc_1 489 62 2513 2512 C 428 0.00 530 reject_low 2 ALIGNMENT 41 YS2-16d24.q1k vc_4 490 530 5831 5871 F 41 100.00 530 reject_low 5 ALIGNMENT 443 YS2-16d24.q1k chr16 30 490 371105 371566 F 461 99.35 530 accept_chi 1 ALIGNMENT 900 YS2-16e01.p1k chr10 1172 33 87666 88790 C 1140 95.09 1355 accept 0 ALIGNMENT 900 YS2-16e01.q1k chr10 29 1188 85723 86878 F 1160 94.05 1301 accept 0 ALIGNMENT 973 YS2-16e02.q1k chr08 51 1140 167621 168710 F 1090 97.34 1282 accept 0 ALIGNMENT 994 YS2-16e02.p1k chr08 1095 32 167651 168713 C 1064 98.78 1304 accept 0 ALIGNMENT 1048 YS2-16e03.p1k chr10 31 1302 497532 498809 F 1272 95.05 1303 accept 0 ALIGNMENT 973 YS2-16e03.q1k chr10 1179 44 500740 501891 C 1136 97.01 1292 accept 0 ALIGNMENT 1016 YS2-16e04.p1k chr16 39 1242 725026 726230 F 1204 96.01 1309 accept 0 ALIGNMENT 988 YS2-16e04.q1k chr16 1290 46 728403 729659 C 1245 94.54 1336 accept 0 ALIGNMENT 0 YS2-16e05.p1k chr08 562 62 85369 85368 C 501 0.00 1332 reject_low 10 ALIGNMENT 0 YS2-16e05.p1k chr05 62 562 469451 469450 F 501 0.00 1332 reject_low 7 ALIGNMENT 0 YS2-16e05.p1k chr13 562 62 586710 586709 C 501 0.00 1332 reject_low 3 ALIGNMENT 76 YS2-16e05.p1k chr10 564 643 378276 378355 F 80 98.75 1332 reject_low 12 ALIGNMENT 566 YS2-16e05.p1k chr07 406 1086 823329 824008 F 681 96.33 1332 accept 0 ALIGNMENT 0 YS2-16e05.p1k chr11 62 563 379323 379322 F 502 0.00 1332 reject_low 14 ALIGNMENT 79 YS2-16e05.p1k chr12 643 564 687855 687934 C 80 100.00 1332 reject_low 8 ALIGNMENT 79 YS2-16e05.p1k chr11 643 561 307783 307865 C 83 98.80 1332 reject_low 5 ALIGNMENT 351 YS2-16e05.p1k chr07 37 411 811077 811451 F 375 98.93 1332 reject_low 1 ALIGNMENT 82 YS2-16e05.p1k chr13 643 546 372438 372536 C 98 94.90 1332 reject_low 2 ALIGNMENT 0 YS2-16e05.p1k chr10 62 563 378276 378275 F 502 0.00 1332 reject_low 12 ALIGNMENT 0 YS2-16e05.p1k chr13 858 643 420583 420582 C 216 0.00 1332 reject_low 9 ALIGNMENT 0 YS2-16e05.p1k chr07 858 638 412298 412297 C 221 0.00 1332 reject_low 13 ALIGNMENT 0 YS2-16e05.p1k chr11 858 644 307784 307783 C 215 0.00 1332 reject_low 5 ALIGNMENT 0 YS2-16e05.p1k chr05 644 858 438775 438774 F 215 0.00 1332 reject_low 11 ALIGNMENT 0 YS2-16e05.p1k chr07 560 62 73905 73904 C 499 0.00 1332 reject_low 4 ALIGNMENT 82 YS2-16e05.p1k chr13 648 563 586623 586709 C 86 98.84 1332 reject_low 3 ALIGNMENT 0 YS2-16e05.p1k chr07 562 62 412372 412371 C 501 0.00 1332 reject_low 13 ALIGNMENT 0 YS2-16e05.p1k chr11 638 858 379396 379395 F 221 0.00 1332 reject_low 14 ALIGNMENT 0 YS2-16e05.p1k chr07 412 858 811451 811450 F 447 0.00 1332 reject_low 1 ALIGNMENT 0 YS2-16e05.p1k chr05 644 858 469531 469530 F 215 0.00 1332 reject_low 7 ALIGNMENT 0 YS2-16e05.p1k chr13 545 62 372537 372536 C 484 0.00 1332 reject_low 2 ALIGNMENT 0 YS2-16e05.p1k chr11 560 62 307866 307865 C 499 0.00 1332 reject_low 5 ALIGNMENT 0 YS2-16e05.p1k chr05 62 563 438696 438695 F 502 0.00 1332 reject_low 11 ALIGNMENT 0 YS2-16e05.p1k chr07 858 644 73823 73822 C 215 0.00 1332 reject_low 4 ALIGNMENT 0 YS2-16e05.p1k chr08 858 644 85289 85288 C 215 0.00 1332 reject_low 10 ALIGNMENT 0 YS2-16e05.p1k chr12 563 62 687935 687934 C 502 0.00 1332 reject_low 8 ALIGNMENT 80 YS2-16e05.p1k chr05 563 643 469451 469531 F 81 100.00 1332 reject_low 7 ALIGNMENT 1037 YS2-16e05.q1k chr07 1337 45 825956 827243 C 1293 94.97 1342 accept 0 ALIGNMENT 0 YS2-16e05.p1k chr15 560 62 663889 663888 C 499 0.00 1332 reject_low 6 ALIGNMENT 77 YS2-16e05.p1k chr08 643 563 85288 85368 C 81 98.77 1332 reject_low 10 ALIGNMENT 79 YS2-16e05.p1k chr07 643 561 73822 73904 C 83 98.80 1332 reject_low 4 ALIGNMENT 74 YS2-16e05.p1k chr11 564 637 379323 379396 F 74 100.00 1332 reject_low 14 ALIGNMENT 79 YS2-16e05.p1k chr13 642 564 420582 420660 C 79 100.00 1332 reject_low 9 ALIGNMENT 0 YS2-16e05.p1k chr13 858 649 586624 586623 C 210 0.00 1332 reject_low 3 ALIGNMENT 0 YS2-16e05.p1k chr12 858 644 687856 687855 C 215 0.00 1332 reject_low 8 ALIGNMENT 76 YS2-16e05.p1k chr05 564 643 438696 438775 F 80 98.75 1332 reject_low 11 ALIGNMENT 0 YS2-16e05.p1k chr10 644 858 378355 378354 F 215 0.00 1332 reject_low 12 ALIGNMENT 79 YS2-16e05.p1k chr15 642 561 663807 663888 C 82 98.78 1332 reject_low 6 ALIGNMENT 75 YS2-16e05.p1k chr07 637 563 412297 412371 C 75 100.00 1332 reject_low 13 ALIGNMENT 0 YS2-16e05.p1k chr13 858 644 372439 372438 C 215 0.00 1332 reject_low 2 ALIGNMENT 0 YS2-16e05.p1k chr13 563 62 420661 420660 C 502 0.00 1332 reject_low 9 ALIGNMENT 0 YS2-16e05.p1k chr07 62 405 823329 823328 F 344 0.00 1332 accept 0 ALIGNMENT 0 YS2-16e05.p1k chr15 858 643 663808 663807 C 216 0.00 1332 reject_low 6 ALIGNMENT 520 YS2-16e06.p1k vc_3 784 1 974 1749 C 784 89.92 824 reject_vc 3 ALIGNMENT 509 YS2-16e06.p1k vc_7 1 687 13918 14599 F 687 92.29 824 reject_low 6 ALIGNMENT 523 YS2-16e06.p1k vc_5 784 1 3894 4669 C 784 90.05 824 reject_vc 0 ALIGNMENT 520 YS2-16e06.p1k vc_1 784 1 974 1749 C 784 89.92 824 reject_vc 1 ALIGNMENT 514 YS2-16e06.p1k vc_7 1 784 456 1231 F 784 89.80 824 reject_vc 4 ALIGNMENT 518 YS2-16e06.p1k vc_6 1 687 3712 4393 F 687 92.72 824 reject_vc 5 ALIGNMENT 520 YS2-16e06.p1k vc_2 784 1 974 1749 C 784 89.92 824 reject_vc 2 ALIGNMENT 1014 YS2-16e07.p1k chr10 1219 40 87612 88790 C 1180 96.78 1355 accept 0 ALIGNMENT 997 YS2-16e07.q1k chr10 49 1262 85723 86938 F 1214 95.30 1386 accept 0 ALIGNMENT 980 YS2-16e08.p1k chr04 1245 35 724965 726177 C 1211 94.88 1335 accept 0 ALIGNMENT 961 YS2-16e08.q1k chr04 37 1225 724580 725755 F 1189 95.37 1409 accept 0 ALIGNMENT 20 YS2-16e09.p1k chr14 46 70 282837 282862 F 25 96.00 1353 reject_low 10 ALIGNMENT 0 YS2-16e09.p1k chr14 71 840 282862 282861 F 770 0.00 1353 reject_low 10 ALIGNMENT 966 YS2-16e09.p1k chr14 37 1157 282528 283646 F 1121 96.79 1353 accept 0 ALIGNMENT 123 YS2-16e09.p1k chr14 46 190 282717 282862 F 145 96.55 1353 reject_low 6 ALIGNMENT 0 YS2-16e09.p1k chr14 62 104 282537 282536 F 43 0.00 1353 reject_low 1 ALIGNMENT 0 YS2-16e09.p1k chr14 375 840 282746 282745 F 466 0.00 1353 reject_low 3 ALIGNMENT 154 YS2-16e09.p1k chr14 46 254 282657 282866 F 209 92.82 1353 reject_low 4 ALIGNMENT 0 YS2-16e09.p1k chr14 315 840 282866 282865 F 526 0.00 1353 reject_low 2 ALIGNMENT 25 YS2-16e09.p1k chr14 345 370 282537 282562 F 26 100.00 1353 reject_low 9 ALIGNMENT 193 YS2-16e09.p1k chr14 105 374 282537 282806 F 270 92.22 1353 reject_low 1 ALIGNMENT 127 YS2-16e09.p1k chr14 225 370 282537 282682 F 146 97.26 1353 reject_low 5 ALIGNMENT 0 YS2-16e09.p1k chr14 135 840 282866 282865 F 706 0.00 1353 reject_low 8 ALIGNMENT 65 YS2-16e09.p1k chr14 285 374 282537 282626 F 90 92.22 1353 reject_low 7 ALIGNMENT 0 YS2-16e09.p1k chr14 375 840 282806 282805 F 466 0.00 1353 reject_low 1 ALIGNMENT 0 YS2-16e09.p1k chr14 371 840 282562 282561 F 470 0.00 1353 reject_low 9 ALIGNMENT 157 YS2-16e09.p1k chr14 165 374 282537 282746 F 210 93.33 1353 reject_low 3 ALIGNMENT 0 YS2-16e09.p1k chr14 62 344 282537 282536 F 283 0.00 1353 reject_low 9 ALIGNMENT 0 YS2-16e09.p1k chr14 62 284 282537 282536 F 223 0.00 1353 reject_low 7 ALIGNMENT 0 YS2-16e09.p1k chr14 255 840 282866 282865 F 586 0.00 1353 reject_low 4 ALIGNMENT 0 YS2-16e09.p1k chr14 191 840 282862 282861 F 650 0.00 1353 reject_low 6 ALIGNMENT 61 YS2-16e09.p1k chr14 46 134 282777 282866 F 89 91.01 1353 reject_low 8 ALIGNMENT 0 YS2-16e09.p1k chr14 62 224 282537 282536 F 163 0.00 1353 reject_low 5 ALIGNMENT 0 YS2-16e09.p1k chr14 371 840 282682 282681 F 470 0.00 1353 reject_low 5 ALIGNMENT 0 YS2-16e09.p1k chr14 62 164 282537 282536 F 103 0.00 1353 reject_low 3 ALIGNMENT 928 YS2-16e09.q1k chr14 1183 37 285750 286901 C 1147 95.82 1360 accept 0 ALIGNMENT 0 YS2-16e09.p1k chr14 375 840 282626 282625 F 466 0.00 1353 reject_low 7 ALIGNMENT 189 YS2-16e09.p1k chr14 46 314 282597 282866 F 269 91.82 1353 reject_low 2 ALIGNMENT 94 YS2-16e10.p1k chr06 397 504 31622 31729 F 108 98.15 1444 reject_low 6 ALIGNMENT 105 YS2-16e10.p1k chr12 137 33 485696 485800 C 105 100.00 1444 reject_low 4 ALIGNMENT 0 YS2-16e10.p1k chr12 835 138 482045 482044 C 698 0.00 1444 reject_low 3 ALIGNMENT 0 YS2-16e10.p1k chr12 835 138 485697 485696 C 698 0.00 1444 reject_low 4 ALIGNMENT 105 YS2-16e10.p1k chr12 137 33 489348 489452 C 105 100.00 1444 reject_low 5 ALIGNMENT 1007 YS2-16e10.q1k chr12 30 1227 463750 464955 F 1198 96.08 1395 reject_low 1 ALIGNMENT 889 YS2-16e10.p1k chr12 1082 33 458745 459779 C 1050 97.33 1444 accept 0 ALIGNMENT 105 YS2-16e10.p1k chr12 137 33 482044 482148 C 105 100.00 1444 reject_low 3 ALIGNMENT 0 YS2-16e10.p1k chr12 835 138 472465 472464 C 698 0.00 1444 reject_low 2 ALIGNMENT 0 YS2-16e10.p1k chr12 835 138 489349 489348 C 698 0.00 1444 reject_low 5 ALIGNMENT 0 YS2-16e10.p1k chr06 505 835 31729 31728 F 331 0.00 1444 reject_low 6 ALIGNMENT 889 YS2-16e10.p1k chr12 1082 33 467882 468916 C 1050 97.33 1444 reject_low 1 ALIGNMENT 0 YS2-16e10.p1k chr06 62 396 31622 31621 F 335 0.00 1444 reject_low 6 ALIGNMENT 1013 YS2-16e10.q1k chr12 30 1310 454613 455906 F 1281 94.54 1395 accept 0 ALIGNMENT 105 YS2-16e10.p1k chr12 137 33 472464 472568 C 105 100.00 1444 reject_low 2 ALIGNMENT 0 YS2-16e11.q1k chr16 557 62 822291 822290 C 496 0.00 1366 reject_low 1 ALIGNMENT 1066 YS2-16e11.q1k chr16 46 1271 821755 822983 F 1226 96.17 1366 accept 0 ALIGNMENT 21 YS2-16e11.q1k chr16 581 558 822267 822290 C 24 95.83 1366 reject_low 1 ALIGNMENT 1041 YS2-16e11.p1k chr16 1266 43 824999 826230 C 1224 96.00 1340 accept 0 ALIGNMENT 0 YS2-16e11.q1k chr16 897 582 822268 822267 C 316 0.00 1366 reject_low 1 ALIGNMENT 591 YS2-16e12.q1k chr12 627 30 921172 921769 C 598 99.83 628 accept_chi 1 ALIGNMENT 591 YS2-16e12.p1k chr12 30 627 921172 921769 F 598 99.83 644 accept_chi 0 ALIGNMENT 0 YS2-16e12.p1k chr12 628 644 921769 921768 F 17 0.00 644 accept_chi 0 ALIGNMENT 0 YS2-16e13.p1k scplasm1 193 62 2956 2955 C 132 0.00 1283 accept 0 ALIGNMENT 667 YS2-16e13.q1k scplasm1 38 1192 1143 2295 F 1155 87.53 1366 accept 0 ALIGNMENT 536 YS2-16e13.p1k scplasm1 1061 194 2082 2955 C 868 88.36 1283 accept 0 ALIGNMENT 1001 YS2-16e15.q1k chr04 39 1293 48097 49353 F 1255 94.50 1370 accept 0 ALIGNMENT 988 YS2-16e15.p1k chr04 1221 32 48781 49980 C 1190 95.55 1306 accept 0 ALIGNMENT 1010 YS2-16e16.p1k chr15 1186 39 408919 410077 C 1148 97.13 1290 accept 0 ALIGNMENT 1056 YS2-16e16.q1k chr15 32 1289 405213 406465 F 1258 96.10 1373 accept 0 ALIGNMENT 20 YS2-16e17.p1k chr03 455 413 247922 247964 C 43 90.70 1281 reject_low 1 ALIGNMENT 964 YS2-16e17.q1k chr06 1210 33 110840 112033 C 1178 96.10 1308 accept 0 ALIGNMENT 0 YS2-16e17.p1k chr03 834 456 247923 247922 C 379 0.00 1281 reject_low 1 ALIGNMENT 946 YS2-16e17.p1k chr06 33 1202 107420 108579 F 1170 94.96 1281 accept 0 ALIGNMENT 0 YS2-16e17.p1k chr03 412 62 247965 247964 C 351 0.00 1281 reject_low 1 ALIGNMENT 1059 YS2-16e19.p1k chr12 42 1253 460750 461965 F 1212 96.62 1275 accept 1 ALIGNMENT 0 YS2-16e19.p1k chr12 62 215 489754 489753 F 154 0.00 1275 reject_low 2 ALIGNMENT 747 YS2-16e19.p1k chr12 216 1007 489754 490543 F 792 98.48 1275 reject_low 2 ALIGNMENT 1059 YS2-16e19.p1k chr12 42 1253 451613 452828 F 1212 96.62 1275 accept 0 ALIGNMENT 1012 YS2-16e19.q1k chr12 1238 46 456240 457452 C 1193 95.73 1303 accept 0 ALIGNMENT 1012 YS2-16e19.q1k chr12 1238 46 465377 466589 C 1193 95.73 1303 accept 1 ALIGNMENT 984 YS2-16e20.q1k chr11 1217 38 305838 307022 C 1180 95.85 1307 accept 0 ALIGNMENT 1012 YS2-16e20.p1k chr11 30 1236 305472 306683 F 1207 95.61 1255 accept 0 ALIGNMENT 0 YS2-16e21.q1k chr16 899 411 809910 809909 C 489 0.00 1312 reject_low 30 ALIGNMENT 128 YS2-16e21.p1k chr13 966 647 184503 184817 C 320 81.56 1282 reject_low 37 ALIGNMENT 900 YS2-16e21.q1k chr03 56 1028 85103 86071 F 973 98.66 1312 reject_low 12 ALIGNMENT 122 YS2-16e21.p1k chr13 966 647 196670 196984 C 320 80.94 1282 reject_low 19 ALIGNMENT 158 YS2-16e21.q1k chr13 38 410 184445 184817 F 373 81.77 1312 reject_low 37 ALIGNMENT 20 YS2-16e21.q1k chr16 38 71 850280 850313 F 34 91.18 1312 reject_low 35 ALIGNMENT 0 YS2-16e21.p1k chr15 646 62 595469 595468 C 585 0.00 1282 reject_low 18 ALIGNMENT 0 YS2-16e21.p1k chr04 62 646 650765 650764 F 585 0.00 1282 reject_low 24 ALIGNMENT 882 YS2-16e21.q1k chr02 38 1028 29917 30902 F 991 97.58 1312 reject_low 15 ALIGNMENT 899 YS2-16e21.q1k chr14 1028 56 566731 567700 C 973 98.66 1312 ambiguous_trans 2 ALIGNMENT 0 YS2-16e21.q1k chr10 647 899 473278 473277 F 253 0.00 1312 reject_low 38 ALIGNMENT 161 YS2-16e21.q1k chr16 38 410 844689 845061 F 373 82.04 1312 reject_low 36 ALIGNMENT 149 YS2-16e21.q1k chr16 410 38 855897 856269 C 373 80.97 1312 reject_low 20 ALIGNMENT 0 YS2-16e21.q1k chr16 411 899 845061 845060 F 489 0.00 1312 reject_low 36 ALIGNMENT 0 YS2-16e21.q1k chr03 96 899 84626 84625 F 804 0.00 1312 reject_low 8 ALIGNMENT 21 YS2-16e21.p1k chr05 411 466 497515 497570 F 56 80.36 1282 reject_low 39 ALIGNMENT 0 YS2-16e21.q1k chr13 411 899 184817 184816 F 489 0.00 1312 reject_low 37 ALIGNMENT 164 YS2-16e21.q1k chr13 38 410 196612 196984 F 373 82.31 1312 reject_low 19 ALIGNMENT 898 YS2-16e21.q1k chr07 41 1028 811731 812713 F 988 98.18 1312 ambiguous_trans 4 ALIGNMENT 161 YS2-16e21.q1k chr02 38 410 259851 260223 F 373 82.04 1312 reject_low 21 ALIGNMENT 861 YS2-16e21.q1k chr15 38 1028 970558 971543 F 991 96.87 1312 reject_low 17 ALIGNMENT 0 YS2-16e21.p1k chr16 62 646 809909 809908 F 585 0.00 1282 reject_low 31 ALIGNMENT 158 YS2-16e21.q1k chr12 410 38 481246 481618 C 373 81.77 1312 reject_low 23 ALIGNMENT 832 YS2-16e21.p1k chr15 1032 32 970558 971544 C 1001 96.20 1282 reject_low 13 ALIGNMENT 882 YS2-16e21.q1k chr04 38 1028 872092 873077 F 991 97.58 1312 reject_low 16 ALIGNMENT 885 YS2-16e21.p1k chr03 1016 32 85099 86072 C 985 98.27 1282 reject_low 8 ALIGNMENT 122 YS2-16e21.p1k chr12 647 966 481246 481560 F 320 80.94 1282 reject_low 28 ALIGNMENT 843 YS2-16e21.p1k chr15 32 1016 708761 709734 F 985 96.85 1282 ambiguous_trans 7 ALIGNMENT 883 YS2-16e21.p1k chr07 1020 32 811737 812714 C 989 98.08 1282 ambiguous_trans 4 ALIGNMENT 140 YS2-16e21.q1k chr10 38 410 478242 478614 F 373 80.43 1312 reject_low 26 ALIGNMENT 0 YS2-16e21.p1k chr05 62 646 448664 448663 F 585 0.00 1282 reject_low 27 ALIGNMENT 891 YS2-16e21.p1k chr12 1016 32 941478 942451 C 985 98.48 1282 ambiguous_trans 0 ALIGNMENT 874 YS2-16e21.p1k chr04 1032 32 981441 982427 C 1001 97.60 1282 reject_low 9 ALIGNMENT 900 YS2-16e21.q1k chr04 38 1028 981441 982426 F 991 98.18 1312 reject_low 14 ALIGNMENT 0 YS2-16e21.q1k chr02 411 899 260223 260222 F 489 0.00 1312 reject_low 21 ALIGNMENT 21 YS2-16e21.p1k chr16 466 411 845254 845309 C 56 80.36 1282 reject_low 36 ALIGNMENT 853 YS2-16e21.p1k chr04 1032 32 872092 873078 C 1001 96.90 1282 reject_low 11 ALIGNMENT 21 YS2-16e21.p1k chr13 466 411 185010 185065 C 56 80.36 1282 reject_low 37 ALIGNMENT 119 YS2-16e21.p1k chr16 647 966 855897 856211 F 320 80.62 1282 reject_low 40 ALIGNMENT 134 YS2-16e21.q1k chr16 410 38 809909 810281 C 373 79.89 1312 reject_low 30 ALIGNMENT 0 YS2-16e21.p1k chr16 467 646 855705 855896 F 180 0.00 1282 reject_low 40 ALIGNMENT 0 YS2-16e21.p1k chr05 467 646 497571 497762 F 180 0.00 1282 reject_low 39 ALIGNMENT 122 YS2-16e21.p1k chr16 966 647 56790 57104 C 320 80.94 1282 reject_low 29 ALIGNMENT 0 YS2-16e21.p1k chr13 646 62 196985 196984 C 585 0.00 1282 reject_low 19 ALIGNMENT 856 YS2-16e21.p1k chr02 1032 32 29917 30903 C 1001 97.00 1282 reject_low 10 ALIGNMENT 906 YS2-16e21.q1k chr12 41 1028 941468 942450 F 988 98.48 1312 ambiguous_trans 0 ALIGNMENT 898 YS2-16e21.q1k chr06 41 1028 138187 139169 F 988 98.18 1312 ambiguous_trans 3 ALIGNMENT 98 YS2-16e21.p1k chr16 647 966 809909 810223 F 320 78.75 1282 reject_low 31 ALIGNMENT 161 YS2-16e21.q1k chr15 38 410 595096 595468 F 373 82.04 1312 reject_low 18 ALIGNMENT 0 YS2-16e21.q1k chr16 62 590 845254 845253 F 529 0.00 1312 reject_low 32 ALIGNMENT 0 YS2-16e21.q1k chr16 899 647 855650 855649 C 253 0.00 1312 reject_low 33 ALIGNMENT 890 YS2-16e21.p1k chr14 32 1016 566730 567704 F 985 98.38 1282 ambiguous_trans 2 ALIGNMENT 0 YS2-16e21.q1k chr10 411 899 478614 478613 F 489 0.00 1312 reject_low 26 ALIGNMENT 0 YS2-16e21.p1k chr12 62 646 481246 481245 F 585 0.00 1282 reject_low 28 ALIGNMENT 164 YS2-16e21.q1k chr10 38 410 472658 473030 F 373 82.31 1312 reject_low 38 ALIGNMENT 128 YS2-16e21.p1k chr16 966 647 844747 845061 C 320 81.56 1282 reject_low 36 ALIGNMENT 0 YS2-16e21.p1k chr05 62 410 497515 497514 F 349 0.00 1282 reject_low 39 ALIGNMENT 128 YS2-16e21.p1k chr13 647 966 377968 378282 F 320 81.56 1282 reject_low 25 ALIGNMENT 879 YS2-16e21.p1k chr04 32 972 518381 519315 F 941 99.04 1282 ambiguous_trans 5 ALIGNMENT 0 YS2-16e21.q1k chr15 411 899 595468 595467 F 489 0.00 1312 reject_low 18 ALIGNMENT 0 YS2-16e21.p1k chr16 646 467 845062 845253 C 180 0.00 1282 reject_low 36 ALIGNMENT 30 YS2-16e21.q1k chr03 41 89 90716 90763 F 49 91.84 1312 reject_low 34 ALIGNMENT 30 YS2-16e21.q1k chr03 56 95 84587 84626 F 40 95.00 1312 reject_low 8 ALIGNMENT 0 YS2-16e21.p1k chr16 410 62 845310 845309 C 349 0.00 1282 reject_low 36 ALIGNMENT 122 YS2-16e21.p1k chr05 647 966 448664 448978 F 320 80.94 1282 reject_low 27 ALIGNMENT 128 YS2-16e21.p1k chr04 647 966 650765 651079 F 320 81.56 1282 reject_low 24 ALIGNMENT 0 YS2-16e21.q1k chr16 899 411 855898 855897 C 489 0.00 1312 reject_low 20 ALIGNMENT 0 YS2-16e21.p1k chr16 646 62 57105 57104 C 585 0.00 1282 reject_low 29 ALIGNMENT 0 YS2-16e21.q1k chr12 899 411 220354 220353 C 489 0.00 1312 reject_low 22 ALIGNMENT 858 YS2-16e21.q1k chr15 1028 41 708762 709744 C 988 96.86 1312 ambiguous_trans 7 ALIGNMENT 21 YS2-16e21.q1k chr10 591 646 473223 473278 F 56 80.36 1312 reject_low 38 ALIGNMENT 0 YS2-16e21.p1k chr16 467 842 855704 855703 F 376 0.00 1282 reject_low 20 ALIGNMENT 903 YS2-16e21.q1k chr07 1028 56 573443 574411 C 973 98.77 1312 ambiguous_trans 1 ALIGNMENT 0 YS2-16e21.p1k chr13 646 467 184818 185009 C 180 0.00 1282 reject_low 37 ALIGNMENT 21 YS2-16e21.q1k chr16 591 646 845254 845309 F 56 80.36 1312 reject_low 32 ALIGNMENT 0 YS2-16e21.q1k chr16 72 899 850313 850312 F 828 0.00 1312 reject_low 35 ALIGNMENT 0 YS2-16e21.p1k chr16 62 410 855649 855648 F 349 0.00 1282 reject_low 20,40 ALIGNMENT 0 YS2-16e21.q1k chr03 90 899 90763 90762 F 810 0.00 1312 reject_low 34 ALIGNMENT 0 YS2-16e21.q1k chr16 590 62 855705 855704 C 529 0.00 1312 reject_low 33 ALIGNMENT 21 YS2-16e21.q1k chr16 646 591 855649 855704 C 56 80.36 1312 reject_low 33 ALIGNMENT 0 YS2-16e21.q1k chr16 647 899 845309 845308 F 253 0.00 1312 reject_low 32 ALIGNMENT 128 YS2-16e21.p1k chr05 647 966 497763 498077 F 320 81.56 1282 reject_low 39 ALIGNMENT 0 YS2-16e21.q1k chr10 411 590 473031 473222 F 180 0.00 1312 reject_low 38 ALIGNMENT 21 YS2-16e21.p1k chr16 411 466 855649 855704 F 56 80.36 1282 reject_low 20,40 ALIGNMENT 128 YS2-16e21.p1k chr15 966 647 595154 595468 C 320 81.56 1282 reject_low 18 ALIGNMENT 0 YS2-16e21.p1k chr13 62 646 377968 377967 F 585 0.00 1282 reject_low 25 ALIGNMENT 0 YS2-16e21.q1k chr13 411 899 196984 196983 F 489 0.00 1312 reject_low 19 ALIGNMENT 876 YS2-16e21.q1k chr12 1028 38 980435 981420 C 991 97.38 1312 ambiguous_trans 6 ALIGNMENT 891 YS2-16e21.p1k chr07 32 1016 573442 574415 F 985 98.48 1282 ambiguous_trans 1 ALIGNMENT 158 YS2-16e21.q1k chr12 410 38 220353 220725 C 373 81.77 1312 reject_low 22 ALIGNMENT 0 YS2-16e21.p1k chr13 410 62 185066 185065 C 349 0.00 1282 reject_low 37 ALIGNMENT 883 YS2-16e21.p1k chr06 1020 32 138193 139170 C 989 98.08 1282 ambiguous_trans 3 ALIGNMENT 885 YS2-16e21.q1k chr04 1028 41 518382 519364 C 988 97.77 1312 ambiguous_trans 5 ALIGNMENT 0 YS2-16e21.q1k chr12 899 411 481247 481246 C 489 0.00 1312 reject_low 23 ALIGNMENT 850 YS2-16e21.p1k chr12 32 1032 980434 981420 F 1001 96.80 1282 ambiguous_trans 6 ALIGNMENT 0 YS2-16e22.q1k vc_7 62 257 13525 13524 F 196 0.00 295 reject_low 6 ALIGNMENT 38 YS2-16e22.q1k vc_7 258 295 13525 13562 F 38 100.00 295 reject_low 6 ALIGNMENT 0 YS2-16e22.q1k vc_5 256 62 5064 5063 C 195 0.00 295 reject_low 5 ALIGNMENT 0 YS2-16e22.q1k vc_3 254 62 2513 2512 C 193 0.00 295 reject_low 3 ALIGNMENT 36 YS2-16e22.q1k vc_5 292 257 1 36 C 36 100.00 295 reject_low 7 ALIGNMENT 0 YS2-16e22.p1k chr11 257 273 127136 127135 F 17 0.00 273 accept_chi 0 ALIGNMENT 220 YS2-16e22.q1k chr11 254 30 126912 127136 C 225 100.00 295 accept_chi 1 ALIGNMENT 0 YS2-16e22.q1k vc_5 256 62 37 36 C 195 0.00 295 reject_low 7 ALIGNMENT 41 YS2-16e22.q1k vc_4 255 295 5831 5871 F 41 100.00 295 reject_low 4 ALIGNMENT 41 YS2-16e22.q1k vc_3 295 255 2472 2512 C 41 100.00 295 reject_low 3 ALIGNMENT 0 YS2-16e22.q1k chr11 295 255 126913 126912 C 41 0.00 295 accept_chi 1 ALIGNMENT 0 YS2-16e22.q1k vc_4 62 254 5831 5830 F 193 0.00 295 reject_low 4 ALIGNMENT 0 YS2-16e22.q1k vc_1 254 62 2513 2512 C 193 0.00 295 reject_low 2 ALIGNMENT 41 YS2-16e22.q1k vc_1 295 255 2472 2512 C 41 100.00 295 reject_low 2 ALIGNMENT 39 YS2-16e22.q1k vc_5 295 257 5025 5063 C 39 100.00 295 reject_low 5 ALIGNMENT 220 YS2-16e22.p1k chr11 32 256 126912 127136 F 225 100.00 273 accept_chi 0 ALIGNMENT 0 YS2-16e23.q1k chr08 186 225 2464 2463 F 40 0.00 225 ambiguous_tel 16 ALIGNMENT 0 YS2-16e23.q1k chr12 225 186 1069086 1069085 C 40 0.00 225 ambiguous_tel 8 ALIGNMENT 0 YS2-16e23.q1k chr12 225 186 1075749 1075748 C 40 0.00 225 ambiguous_tel 9 ALIGNMENT 0 YS2-16e23.q1k chr05 225 186 574377 574376 C 40 0.00 225 ambiguous_tel 1 ALIGNMENT 144 YS2-16e23.q1k chr07 185 35 1088453 1088603 C 151 99.34 225 ambiguous_tel 3 ALIGNMENT 0 YS2-16e23.q1k chr04 225 186 1529548 1529547 C 40 0.00 225 ambiguous_tel 0 ALIGNMENT 0 YS2-16e23.q1k chr08 225 186 559900 559899 C 40 0.00 225 ambiguous_tel 17 ALIGNMENT 0 YS2-16e23.q1k chr10 186 225 2886 2885 F 40 0.00 225 ambiguous_tel 5 ALIGNMENT 141 YS2-16e23.q1k chr08 185 35 559899 560049 C 151 98.68 225 ambiguous_tel 17 ALIGNMENT 144 YS2-16e23.q1k chr04 185 35 1529547 1529697 C 151 99.34 225 ambiguous_tel 0 ALIGNMENT 40 YS2-16e23.q1k vc_3 225 186 2472 2511 C 40 100.00 225 reject_low 19 ALIGNMENT 0 YS2-16e23.q1k vc_7 62 187 13525 13524 F 126 0.00 225 reject_low 20 ALIGNMENT 0 YS2-16e23.q1k vc_3 185 62 2512 2511 C 124 0.00 225 reject_low 19 ALIGNMENT 144 YS2-16e23.q1k chr16 35 185 2274 2424 F 151 99.34 225 ambiguous_tel 13 ALIGNMENT 144 YS2-16e23.q1k chr12 35 185 2582 2732 F 151 99.34 225 ambiguous_tel 6 ALIGNMENT 144 YS2-16e23.q1k chr12 185 35 1075748 1075898 C 151 99.34 225 ambiguous_tel 9 ALIGNMENT 0 YS2-16e23.q1k chr06 186 225 1769 1768 F 40 0.00 225 ambiguous_tel 2 ALIGNMENT 0 YS2-16e23.q1k chr14 186 225 2515 2514 F 40 0.00 225 ambiguous_tel 11 ALIGNMENT 0 YS2-16e23.q1k chr02 186 225 2932 2931 F 40 0.00 225 ambiguous_tel 15 ALIGNMENT 0 YS2-16e23.q1k chr15 225 186 1088713 1088712 C 40 0.00 225 ambiguous_tel 12 ALIGNMENT 0 YS2-16e23.q1k chr09 186 225 2903 2902 F 40 0.00 225 ambiguous_tel 4 ALIGNMENT 0 YS2-16e23.q1k chr13 186 225 2608 2607 F 40 0.00 225 ambiguous_tel 10 ALIGNMENT 144 YS2-16e23.q1k chr16 185 35 945445 945595 C 151 99.34 225 ambiguous_tel 14 ALIGNMENT 144 YS2-16e23.q1k chr13 35 185 2458 2608 F 151 99.34 225 ambiguous_tel 10 ALIGNMENT 144 YS2-16e23.q1k chr05 185 35 574376 574526 C 151 99.34 225 ambiguous_tel 1 ALIGNMENT 141 YS2-16e23.q1k chr02 35 185 2782 2932 F 151 98.68 225 ambiguous_tel 15 ALIGNMENT 0 YS2-16e23.q1k chr16 225 186 945446 945445 C 40 0.00 225 ambiguous_tel 14 ALIGNMENT 0 YS2-16e23.q1k chr07 225 186 1088454 1088453 C 40 0.00 225 ambiguous_tel 3 ALIGNMENT 141 YS2-16e23.q1k chr08 35 185 2314 2464 F 151 98.68 225 ambiguous_tel 16 ALIGNMENT 144 YS2-16e23.q1k chr14 35 185 2365 2515 F 151 99.34 225 ambiguous_tel 11 ALIGNMENT 144 YS2-16e23.q1k chr12 35 185 8117 8267 F 151 99.34 225 ambiguous_tel 7 ALIGNMENT 38 YS2-16e23.q1k vc_7 188 225 13525 13562 F 38 100.00 225 reject_low 20 ALIGNMENT 144 YS2-16e23.q1k chr15 185 35 1088712 1088862 C 151 99.34 225 ambiguous_tel 12 ALIGNMENT 0 YS2-16e23.q1k chr12 186 225 8267 8266 F 40 0.00 225 ambiguous_tel 7 ALIGNMENT 138 YS2-16e23.q1k chr05 35 185 2429 2579 F 151 98.01 225 ambiguous_tel 18 ALIGNMENT 0 YS2-16e23.q1k chr12 186 225 2732 2731 F 40 0.00 225 ambiguous_tel 6 ALIGNMENT 144 YS2-16e23.q1k chr10 35 185 2736 2886 F 151 99.34 225 ambiguous_tel 5 ALIGNMENT 144 YS2-16e23.q1k chr09 35 185 2753 2903 F 151 99.34 225 ambiguous_tel 4 ALIGNMENT 144 YS2-16e23.q1k chr06 35 185 1619 1769 F 151 99.34 225 ambiguous_tel 2 ALIGNMENT 0 YS2-16e23.q1k chr05 186 225 2579 2578 F 40 0.00 225 ambiguous_tel 18 ALIGNMENT 0 YS2-16e23.q1k chr16 186 225 2424 2423 F 40 0.00 225 ambiguous_tel 13 ALIGNMENT 144 YS2-16e23.q1k chr12 185 35 1069085 1069235 C 151 99.34 225 ambiguous_tel 8 ALIGNMENT 662 YS2-16e24.p1k chr14 32 734 63787 64491 F 703 98.86 734 accept_chi 1 ALIGNMENT 0 YS2-16e24.p1k chr15 265 734 93844 93843 F 470 0.00 734 reject_low 3 ALIGNMENT 0 YS2-16e24.q1k chr15 495 62 93845 93844 C 434 0.00 731 reject_low 2 ALIGNMENT 207 YS2-16e24.q1k chr15 730 496 93610 93844 C 235 96.17 731 reject_low 2 ALIGNMENT 198 YS2-16e24.p1k chr15 35 264 93614 93844 F 230 95.65 734 reject_low 3 ALIGNMENT 667 YS2-16e24.q1k chr14 730 27 63786 64491 C 704 99.01 731 accept_chi 0 ALIGNMENT 0 YS2-16f01.q1k chr11 663 702 113058 113057 F 40 0.00 702 accept_chi 0 ALIGNMENT 0 YS2-16f01.q1k vc_1 661 62 2513 2512 C 600 0.00 702 reject_low 2 ALIGNMENT 41 YS2-16f01.q1k vc_3 702 662 2472 2512 C 41 100.00 702 reject_low 3 ALIGNMENT 597 YS2-16f01.q1k chr11 34 662 112429 113058 F 629 99.84 702 accept_chi 0 ALIGNMENT 41 YS2-16f01.q1k vc_1 702 662 2472 2512 C 41 100.00 702 reject_low 2 ALIGNMENT 0 YS2-16f01.q1k vc_4 62 661 5831 5830 F 600 0.00 702 reject_low 4 ALIGNMENT 0 YS2-16f01.q1k vc_7 62 664 13525 13524 F 603 0.00 702 reject_low 6 ALIGNMENT 36 YS2-16f01.q1k vc_5 699 664 1 36 C 36 100.00 702 reject_low 7 ALIGNMENT 38 YS2-16f01.q1k vc_7 665 702 13525 13562 F 38 100.00 702 reject_low 6 ALIGNMENT 39 YS2-16f01.q1k vc_5 702 664 5025 5063 C 39 100.00 702 reject_low 5 ALIGNMENT 41 YS2-16f01.q1k vc_4 662 702 5831 5871 F 41 100.00 702 reject_low 4 ALIGNMENT 540 YS2-16f01.p1k chr11 662 78 112429 113011 C 585 98.97 662 accept_chi 1 ALIGNMENT 0 YS2-16f01.q1k vc_5 663 62 37 36 C 602 0.00 702 reject_low 7 ALIGNMENT 0 YS2-16f01.q1k vc_3 661 62 2513 2512 C 600 0.00 702 reject_low 3 ALIGNMENT 0 YS2-16f01.q1k vc_5 663 62 5064 5063 C 602 0.00 702 reject_low 5 ALIGNMENT 23 YS2-16f02.q1k chr09 229 267 169451 169489 F 39 94.87 1322 reject_low 10 ALIGNMENT 602 YS2-16f02.q1k chr06 217 1009 87966 88748 F 793 93.69 1322 accept 0 ALIGNMENT 0 YS2-16f02.q1k chr04 255 471 923095 923094 F 217 0.00 1322 reject_low 8 ALIGNMENT 0 YS2-16f02.q1k chr02 471 268 780326 780325 C 204 0.00 1322 reject_low 2 ALIGNMENT 0 YS2-16f02.q1k chr02 179 62 780413 780412 C 118 0.00 1322 reject_low 2 ALIGNMENT 31 YS2-16f02.q1k chr02 266 199 780389 780456 C 68 91.18 1322 reject_low 4 ALIGNMENT 0 YS2-16f02.q1k chr06 238 471 88016 88015 F 234 0.00 1322 reject_low 1 ALIGNMENT 0 YS2-16f02.q1k chr02 471 267 780390 780389 C 205 0.00 1322 reject_low 4 ALIGNMENT 0 YS2-16f02.q1k chr04 62 230 923042 923041 F 169 0.00 1322 reject_low 13 ALIGNMENT 0 YS2-16f02.q1k chr14 62 200 720272 720271 F 139 0.00 1322 reject_low 6 ALIGNMENT 0 YS2-16f02.q1k chr15 471 264 236961 236960 C 208 0.00 1322 reject_low 3 ALIGNMENT 0 YS2-16f02.q1k chr13 217 62 354606 354605 C 156 0.00 1322 reject_low 7 ALIGNMENT 184 YS2-16f02.q1k chr06 27 237 87806 88016 F 211 98.58 1322 reject_low 1 ALIGNMENT 0 YS2-16f02.q1k chr04 62 200 923042 923041 F 139 0.00 1322 reject_low 8 ALIGNMENT 0 YS2-16f02.q1k chr09 268 471 169489 169488 F 204 0.00 1322 reject_low 10 ALIGNMENT 22 YS2-16f02.q1k chr06 260 228 160562 160594 C 33 96.97 1322 reject_low 14 ALIGNMENT 0 YS2-16f02.q1k chr14 221 62 604267 604266 C 160 0.00 1322 reject_low 12 ALIGNMENT 0 YS2-16f02.q1k chr06 471 261 160563 160562 C 211 0.00 1322 reject_low 14 ALIGNMENT 22 YS2-16f02.q1k chr02 266 225 780425 780466 C 42 92.86 1322 reject_low 11 ALIGNMENT 0 YS2-16f02.q1k chr02 198 62 780457 780456 C 137 0.00 1322 reject_low 4 ALIGNMENT 0 YS2-16f02.q1k chr14 471 258 604232 604231 C 214 0.00 1322 reject_low 12 ALIGNMENT 743 YS2-16f02.p1k chr06 1161 161 90743 91754 C 1001 92.71 1291 accept 0 ALIGNMENT 0 YS2-16f02.q1k chr04 267 471 923077 923076 F 205 0.00 1322 reject_low 13 ALIGNMENT 21 YS2-16f02.q1k chr04 231 266 923042 923077 F 36 94.44 1322 reject_low 13 ALIGNMENT 26 YS2-16f02.q1k chr02 260 207 505199 505252 C 54 92.59 1322 reject_low 5 ALIGNMENT 0 YS2-16f02.q1k chr13 471 268 354557 354556 C 204 0.00 1322 reject_low 7 ALIGNMENT 23 YS2-16f02.q1k chr14 257 222 604231 604266 C 36 97.22 1322 reject_low 12 ALIGNMENT 27 YS2-16f02.q1k chr02 267 180 780325 780412 C 88 86.36 1322 reject_low 2 ALIGNMENT 0 YS2-16f02.q1k chr15 192 62 237030 237029 C 131 0.00 1322 reject_low 3 ALIGNMENT 22 YS2-16f02.q1k chr14 201 246 720272 720317 F 46 91.30 1322 reject_low 6 ALIGNMENT 0 YS2-16f02.q1k chr09 62 228 169451 169450 F 167 0.00 1322 reject_low 10 ALIGNMENT 0 YS2-16f02.q1k chr06 227 62 160595 160594 C 166 0.00 1322 reject_low 14 ALIGNMENT 0 YS2-16f02.q1k chr02 471 261 505200 505199 C 211 0.00 1322 reject_low 5 ALIGNMENT 25 YS2-16f02.q1k chr11 219 266 381283 381330 F 48 93.75 1322 reject_low 9 ALIGNMENT 26 YS2-16f02.q1k chr13 267 218 354556 354605 C 50 94.00 1322 reject_low 7 ALIGNMENT 0 YS2-16f02.q1k chr11 62 218 381283 381282 F 157 0.00 1322 reject_low 9 ALIGNMENT 0 YS2-16f02.q1k chr02 224 62 780467 780466 C 163 0.00 1322 reject_low 11 ALIGNMENT 32 YS2-16f02.q1k chr15 263 193 236960 237029 C 71 91.55 1322 reject_low 3 ALIGNMENT 0 YS2-16f02.q1k chr14 247 471 720317 720316 F 225 0.00 1322 reject_low 6 ALIGNMENT 0 YS2-16f02.q1k chr02 206 62 505253 505252 C 145 0.00 1322 reject_low 5 ALIGNMENT 0 YS2-16f02.q1k chr02 471 267 780426 780425 C 205 0.00 1322 reject_low 11 ALIGNMENT 0 YS2-16f02.q1k chr11 267 471 381330 381329 F 205 0.00 1322 reject_low 9 ALIGNMENT 0 YS2-16f02.q1k chr06 62 216 87966 87965 F 155 0.00 1322 accept 0 ALIGNMENT 22 YS2-16f02.q1k chr04 201 254 923042 923095 F 54 88.89 1322 reject_low 8 ALIGNMENT 128 YS2-16f03.q1k vc_4 1241 961 5531 5812 C 281 83.63 1336 reject_low 3 ALIGNMENT 663 YS2-16f03.q1k chr06 46 920 3479 4338 F 875 93.71 1336 reject_low 31 ALIGNMENT 108 YS2-16f03.p1k vc_7 929 1155 13562 13804 F 227 85.02 1284 reject_low 2 ALIGNMENT 813 YS2-16f03.p1k chr12 910 43 9976 10845 C 868 98.73 1284 accept_tel 0 ALIGNMENT 618 YS2-16f03.q1k chr05 920 99 570661 571463 C 822 93.55 1336 reject_low 38 ALIGNMENT 0 YS2-16f03.q1k vc_4 960 62 5813 5812 C 899 0.00 1336 reject_low 3 ALIGNMENT 25 YS2-16f03.p1k chr05 75 43 6137 6170 C 33 93.94 1284 reject_low 27 ALIGNMENT 822 YS2-16f03.q1k chr13 46 920 4317 5191 F 875 98.63 1336 reject_low 5 ALIGNMENT 806 YS2-16f03.p1k chr12 43 910 1072002 1072872 F 868 98.50 1284 reject_low 11 ALIGNMENT 0 YS2-16f03.q1k chr05 73 98 5391 5399 F 26 0.00 1336 reject_low 27 ALIGNMENT 0 YS2-16f03.p1k chr02 102 76 5462 5461 C 27 0.00 1284 reject_low 35 ALIGNMENT 21 YS2-16f03.p1k chr05 910 883 5363 5390 C 28 92.86 1284 reject_low 44 ALIGNMENT 748 YS2-16f03.q1k chr14 46 920 5391 6271 F 875 96.11 1336 reject_low 16 ALIGNMENT 0 YS2-16f03.p1k chr08 76 819 557370 557369 F 744 0.00 1284 reject_low 26 ALIGNMENT 813 YS2-16f03.p1k chr12 910 43 4441 5310 C 868 98.73 1284 reject_low 8 ALIGNMENT 600 YS2-16f03.q1k chr12 854 46 1065530 1066320 C 809 93.45 1336 reject_low 34 ALIGNMENT 733 YS2-16f03.p1k chr16 43 910 942860 943735 F 868 95.97 1284 reject_low 24 ALIGNMENT 0 YS2-16f03.p1k chr05 62 882 571473 571472 F 821 0.00 1284 reject_low 45 ALIGNMENT 815 YS2-16f03.q1k chr12 920 46 1071997 1072872 C 875 98.40 1336 reject_low 1 ALIGNMENT 748 YS2-16f03.q1k chr10 46 920 5763 6643 F 875 96.00 1336 reject_low 15 ALIGNMENT 716 YS2-16f03.q1k chr08 854 46 557371 558189 C 809 97.16 1336 reject_low 26 ALIGNMENT 739 YS2-16f03.p1k chr09 910 43 5780 6655 C 868 96.20 1284 reject_low 20 ALIGNMENT 560 YS2-16f03.p1k chr05 857 103 5401 6136 C 755 93.51 1284 reject_low 27 ALIGNMENT 0 YS2-16f03.p1k vc_7 62 928 13562 13561 F 867 0.00 1284 reject_low 2 ALIGNMENT 0 YS2-16f03.q1k chr08 881 62 557371 557370 C 820 0.00 1336 reject_low 42 ALIGNMENT 719 YS2-16f03.q1k chr08 46 823 4173 4951 F 778 98.33 1336 reject_low 28 ALIGNMENT 618 YS2-16f03.p1k chr05 39 857 570661 571462 F 819 93.89 1284 reject_low 30 ALIGNMENT 0 YS2-16f03.q1k chr05 62 881 6137 6136 F 820 0.00 1336 reject_low 41 ALIGNMENT 23 YS2-16f03.q1k chr05 72 46 571473 571500 C 27 96.30 1336 reject_low 30,38 ALIGNMENT 721 YS2-16f03.q1k chr02 46 854 4642 5461 F 809 97.28 1336 reject_low 25 ALIGNMENT 0 YS2-16f03.q1k chr12 881 62 1065530 1065529 C 820 0.00 1336 reject_low 43 ALIGNMENT 815 YS2-16f03.q1k chr04 920 46 1525796 1526671 C 875 98.40 1336 reject_low 6 ALIGNMENT 561 YS2-16f03.q1k chr05 99 854 5400 6136 F 756 93.52 1336 reject_low 27 ALIGNMENT 25 YS2-16f03.p1k chr08 43 75 557337 557370 F 33 93.94 1284 reject_low 26,36 ALIGNMENT 739 YS2-16f03.p1k chr16 910 43 5300 6175 C 868 96.20 1284 reject_low 23 ALIGNMENT 21 YS2-16f03.p1k chr05 883 910 571473 571500 F 28 92.86 1284 reject_low 45 ALIGNMENT 748 YS2-16f03.q1k chr09 46 920 5780 6660 F 875 96.00 1336 reject_low 14 ALIGNMENT 0 YS2-16f03.p1k chr08 133 62 4952 4951 C 72 0.00 1284 reject_low 29 ALIGNMENT 41 YS2-16f03.q1k vc_4 921 961 5831 5871 F 41 100.00 1336 reject_low 33 ALIGNMENT 25 YS2-16f03.p1k chr02 75 43 5462 5495 C 33 93.94 1284 reject_low 25,35 ALIGNMENT 706 YS2-16f03.p1k chr08 103 910 557371 558189 F 808 96.78 1284 reject_low 36 ALIGNMENT 0 YS2-16f03.q1k chr05 98 73 571464 571472 C 26 0.00 1336 reject_low 38 ALIGNMENT 0 YS2-16f03.q1k vc_4 62 920 5831 5830 F 859 0.00 1336 reject_low 33 ALIGNMENT 815 YS2-16f03.q1k chr15 920 46 1084961 1085836 C 875 98.40 1336 reject_low 7 ALIGNMENT 0 YS2-16f03.q1k vc_4 62 960 126 125 F 899 0.00 1336 reject_low 37 ALIGNMENT 102 YS2-16f03.q1k vc_4 961 1116 6353 6509 F 156 89.74 1336|1,0 reject_low 33 ALIGNMENT 0 YS2-16f03.q1k vc_4 960 62 1535 1534 C 899 0.00 1336 reject_low 39 ALIGNMENT 0 YS2-16f03.p1k chr08 76 102 557371 557370 F 27 0.00 1284 reject_low 36 ALIGNMENT 748 YS2-16f03.q1k chr07 920 46 1084697 1085577 C 875 96.11 1336 reject_low 13 ALIGNMENT 23 YS2-16f03.q1k chr12 920 882 1065491 1065529 C 39 82.05 1336 reject_low 43 ALIGNMENT 0 YS2-16f03.q1k chr02 62 881 5462 5461 F 820 0.00 1336 reject_low 40 ALIGNMENT 0 YS2-16f03.p1k chr05 882 62 5391 5390 C 821 0.00 1284 reject_low 44 ALIGNMENT 102 YS2-16f03.q1k vc_4 961 1116 126 282 F 156 89.74 1336 reject_low 37 ALIGNMENT 822 YS2-16f03.q1k chr12 46 920 9976 10850 F 875 98.63 1336 reject_low 4 ALIGNMENT 739 YS2-16f03.p1k chr14 910 43 5391 6266 C 868 96.20 1284 reject_low 22 ALIGNMENT 822 YS2-16f03.q1k chr12 46 920 4441 5315 F 875 98.63 1336 accept_tel 0 ALIGNMENT 709 YS2-16f03.p1k chr08 910 134 4173 4951 C 777 97.94 1284 reject_low 29 ALIGNMENT 0 YS2-16f03.p1k chr02 819 76 5463 5462 C 744 0.00 1284 reject_low 25 ALIGNMENT 25 YS2-16f03.p1k chr12 43 75 1065496 1065529 F 33 93.94 1284 reject_low 1,34 ALIGNMENT 748 YS2-16f03.q1k chr16 46 920 5300 6180 F 875 96.11 1336 reject_low 17 ALIGNMENT 742 YS2-16f03.q1k chr16 920 46 942855 943735 C 875 95.77 1336 reject_low 18 ALIGNMENT 806 YS2-16f03.p1k chr04 43 910 1525801 1526671 F 868 98.50 1284 reject_low 10 ALIGNMENT 739 YS2-16f03.p1k chr07 43 910 1084702 1085577 F 868 96.20 1284 reject_low 19 ALIGNMENT 0 YS2-16f03.q1k vc_4 962 961 5872 6353 F 0 0.00 1336 reject_low 33 ALIGNMENT 0 YS2-16f03.q1k chr05 855 73 571474 571473 C 783 0.00 1336 reject_low 30 ALIGNMENT 813 YS2-16f03.p1k chr13 910 43 4317 5186 C 868 98.73 1284 reject_low 9 ALIGNMENT 23 YS2-16f03.q1k chr05 882 920 6137 6175 F 39 82.05 1336 reject_low 41 ALIGNMENT 711 YS2-16f03.p1k chr02 910 103 4642 5461 C 808 96.91 1284 reject_low 35 ALIGNMENT 589 YS2-16f03.p1k chr12 103 910 1065530 1066320 F 808 93.07 1284 reject_low 1 ALIGNMENT 0 YS2-16f03.p1k chr12 76 102 1065530 1065529 F 27 0.00 1284 reject_low 1 ALIGNMENT 0 YS2-16f03.p1k chr12 76 819 1065529 1065528 F 744 0.00 1284 reject_low 34 ALIGNMENT 23 YS2-16f03.q1k chr05 46 72 5363 5390 F 27 96.30 1336 reject_low 27 ALIGNMENT 655 YS2-16f03.p1k chr06 910 43 3479 4333 C 868 93.78 1284 reject_low 32 ALIGNMENT 23 YS2-16f03.q1k chr08 920 882 557332 557370 C 39 82.05 1336 reject_low 42 ALIGNMENT 57 YS2-16f03.q1k vc_4 1041 961 1452 1534 C 81 91.36 1336 reject_low 39 ALIGNMENT 0 YS2-16f03.q1k chr08 824 855 4951 4950 F 32 0.00 1336 reject_low 28 ALIGNMENT 23 YS2-16f03.q1k chr02 882 920 5462 5500 F 39 82.05 1336 reject_low 40 ALIGNMENT 806 YS2-16f03.p1k chr15 43 910 1084966 1085836 F 868 98.50 1284 reject_low 12 ALIGNMENT 0 YS2-16f03.p1k chr05 102 76 6137 6136 C 27 0.00 1284 reject_low 27 ALIGNMENT 739 YS2-16f03.p1k chr10 910 43 5763 6638 C 868 96.20 1284 reject_low 21 ALIGNMENT 115 YS2-16f04.q1k vc_4 956 1111 6353 6508 F 156 91.67 1325 reject_low 28 ALIGNMENT 0 YS2-16f04.q1k vc_4 953 955 5869 6352 F 3 0.00 1325 reject_low 28 ALIGNMENT 627 YS2-16f04.q1k chr05 914 93 570661 571463 C 822 93.92 1325 reject_low 38 ALIGNMENT 813 YS2-16f04.p1k chr12 34 907 1071997 1072872 F 874 98.63 1277 reject_low 18 ALIGNMENT 32 YS2-16f04.q1k chr05 876 914 6137 6175 F 39 92.31 1325 reject_low 43 ALIGNMENT 38 YS2-16f04.q1k vc_4 915 952 5831 5868 F 38 100.00 1325 reject_low 28 ALIGNMENT 824 YS2-16f04.q1k chr15 914 40 1084961 1085836 C 875 98.74 1325 reject_low 8 ALIGNMENT 758 YS2-16f04.q1k chr10 40 914 5763 6643 F 875 96.46 1325 reject_low 11 ALIGNMENT 746 YS2-16f04.p1k chr14 907 38 5391 6266 C 870 96.44 1277 reject_low 24 ALIGNMENT 813 YS2-16f04.p1k chr04 34 907 1525796 1526671 F 874 98.63 1277 reject_low 17 ALIGNMENT 813 YS2-16f04.p1k chr15 34 907 1084961 1085836 F 874 98.63 1277 reject_low 19 ALIGNMENT 746 YS2-16f04.p1k chr16 907 38 5300 6175 C 870 96.44 1277 reject_low 25 ALIGNMENT 758 YS2-16f04.q1k chr07 914 40 1084697 1085577 C 875 96.46 1325 reject_low 9 ALIGNMENT 831 YS2-16f04.q1k chr13 40 914 4317 5191 F 875 98.97 1325 reject_low 6 ALIGNMENT 0 YS2-16f04.q1k chr12 875 62 1065530 1065529 C 814 0.00 1325 reject_low 42 ALIGNMENT 0 YS2-16f04.q1k chr02 849 875 5462 5461 F 27 0.00 1325 reject_low 33 ALIGNMENT 600 YS2-16f04.q1k chr12 848 40 1065530 1066320 C 809 93.45 1325 reject_low 30 ALIGNMENT 0 YS2-16f04.p1k chr12 71 97 1065530 1065529 F 27 0.00 1277 reject_low 4 ALIGNMENT 0 YS2-16f04.p1k chr02 97 71 5462 5461 C 27 0.00 1277 reject_low 36 ALIGNMENT 0 YS2-16f04.q1k vc_4 62 955 126 125 F 894 0.00 1325 reject_low 35 ALIGNMENT 717 YS2-16f04.p1k chr02 907 98 4642 5461 C 810 97.16 1277 reject_low 36 ALIGNMENT 0 YS2-16f04.q1k vc_4 955 62 5813 5812 C 894 0.00 1325 reject_low 3 ALIGNMENT 0 YS2-16f04.q1k chr12 880 849 1065531 1065530 C 32 0.00 1325 reject_low 30 ALIGNMENT 23 YS2-16f04.q1k chr05 40 66 5363 5390 F 27 96.30 1325 reject_low 39,40,43 ALIGNMENT 0 YS2-16f04.q1k chr05 880 67 571474 571473 C 814 0.00 1325 reject_low 32 ALIGNMENT 142 YS2-16f04.p1k vc_7 925 1144 100 325 F 220 90.00 1277 reject_low 1 ALIGNMENT 716 YS2-16f04.q1k chr08 848 40 557371 558189 C 809 97.16 1325 reject_low 34 ALIGNMENT 824 YS2-16f04.q1k chr12 914 40 1071997 1072872 C 875 98.74 1325 reject_low 4 ALIGNMENT 712 YS2-16f04.p1k chr08 98 907 557371 558189 F 810 97.04 1277 reject_low 37 ALIGNMENT 752 YS2-16f04.q1k chr16 914 40 942855 943735 C 875 96.23 1325 reject_low 14 ALIGNMENT 0 YS2-16f04.p1k chr08 71 97 557371 557370 F 27 0.00 1277 reject_low 37 ALIGNMENT 831 YS2-16f04.q1k chr12 40 914 9976 10850 F 875 98.97 1325 reject_low 5 ALIGNMENT 162 YS2-16f04.q1k vc_4 1301 956 5460 5812 C 346 83.82 1325 reject_low 3 ALIGNMENT 758 YS2-16f04.q1k chr09 40 914 5780 6660 F 875 96.46 1325 reject_low 10 ALIGNMENT 820 YS2-16f04.p1k chr12 907 38 4441 5310 C 870 98.97 1277 reject_low 15 ALIGNMENT 746 YS2-16f04.p1k chr09 907 38 5780 6655 C 870 96.44 1277 reject_low 22 ALIGNMENT 740 YS2-16f04.p1k chr16 34 907 942855 943735 F 874 96.11 1277 reject_low 26 ALIGNMENT 0 YS2-16f04.p1k vc_7 62 924 100 99 F 863 0.00 1277 reject_low 1 ALIGNMENT 25 YS2-16f04.p1k chr02 70 38 5462 5495 C 33 93.94 1277 reject_low 36 ALIGNMENT 142 YS2-16f04.p1k vc_7 925 1144 13562 13787 F 220 90.00 1277 reject_low 2 ALIGNMENT 0 YS2-16f04.p1k chr12 71 866 1065529 1065528 F 796 0.00 1277 reject_low 30 ALIGNMENT 746 YS2-16f04.p1k chr07 34 907 1084697 1085577 F 874 96.34 1277 reject_low 21 ALIGNMENT 24 YS2-16f04.p1k chr12 34 70 1065491 1065529 F 37 91.89 1277 reject_low 4,30 ALIGNMENT 0 YS2-16f04.p1k chr05 97 71 6137 6136 C 27 0.00 1277 reject_low 40 ALIGNMENT 0 YS2-16f04.q1k chr05 849 880 6136 6135 F 32 0.00 1325 reject_low 39 ALIGNMENT 746 YS2-16f04.p1k chr10 907 38 5763 6638 C 870 96.44 1277 reject_low 23 ALIGNMENT 0 YS2-16f04.q1k chr08 818 880 4951 4950 F 63 0.00 1325 reject_low 20 ALIGNMENT 0 YS2-16f04.q1k vc_4 955 62 1535 1534 C 894 0.00 1325 reject_low 41 ALIGNMENT 820 YS2-16f04.p1k chr13 907 38 4317 5186 C 870 98.97 1277 reject_low 16 ALIGNMENT 32 YS2-16f04.q1k chr02 876 914 5462 5500 F 39 92.31 1325 reject_low 33 ALIGNMENT 0 YS2-16f04.q1k chr05 92 67 571464 571472 C 26 0.00 1325 reject_low 38 ALIGNMENT 0 YS2-16f04.p1k vc_7 62 924 13562 13561 F 863 0.00 1277 reject_low 2 ALIGNMENT 32 YS2-16f04.q1k chr08 914 876 557332 557370 C 39 92.31 1325 reject_low 34 ALIGNMENT 619 YS2-16f04.p1k chr05 34 853 570661 571463 F 820 93.90 1277 reject_low 32 ALIGNMENT 0 YS2-16f04.p1k chr08 128 62 4952 4951 C 67 0.00 1277 reject_low 29 ALIGNMENT 758 YS2-16f04.q1k chr16 40 914 5300 6180 F 875 96.46 1325 reject_low 13 ALIGNMENT 115 YS2-16f04.q1k vc_4 956 1111 126 281 F 156 91.67 1325 reject_low 35 ALIGNMENT 0 YS2-16f04.q1k chr05 67 875 5391 6136 F 809 0.00 1325 reject_low 43 ALIGNMENT 721 YS2-16f04.q1k chr02 40 848 4642 5461 F 809 97.28 1325 reject_low 33 ALIGNMENT 716 YS2-16f04.p1k chr08 907 129 4173 4951 C 779 98.20 1277 reject_low 29 ALIGNMENT 24 YS2-16f04.p1k chr08 34 70 557332 557370 F 37 91.89 1277 reject_low 37 ALIGNMENT 73 YS2-16f04.q1k vc_4 1044 956 1446 1534 C 89 95.51 1325 reject_low 41 ALIGNMENT 0 YS2-16f04.q1k chr05 67 92 5391 5399 F 26 0.00 1325 reject_low 39 ALIGNMENT 32 YS2-16f04.q1k chr12 914 876 1065491 1065529 C 39 92.31 1325 reject_low 42 ALIGNMENT 824 YS2-16f04.q1k chr04 914 40 1525796 1526671 C 875 98.74 1325 reject_low 7 ALIGNMENT 661 YS2-16f04.p1k chr06 907 38 3479 4333 C 870 94.02 1277 reject_low 31 ALIGNMENT 0 YS2-16f04.q1k chr05 67 880 5390 5389 F 814 0.00 1325 reject_low 40 ALIGNMENT 758 YS2-16f04.q1k chr14 40 914 5391 6271 F 875 96.46 1325 reject_low 12 ALIGNMENT 0 YS2-16f04.p1k chr05 866 71 6138 6137 C 796 0.00 1277 reject_low 39 ALIGNMENT 0 YS2-16f04.q1k vc_4 62 914 5831 5830 F 853 0.00 1325 reject_low 28 ALIGNMENT 673 YS2-16f04.q1k chr06 40 914 3479 4338 F 875 94.06 1325 reject_low 27 ALIGNMENT 596 YS2-16f04.p1k chr12 98 907 1065530 1066320 F 810 93.33 1277 reject_low 4 ALIGNMENT 831 YS2-16f04.q1k chr12 40 914 4441 5315 F 875 98.97 1325 accept_tel 0 ALIGNMENT 820 YS2-16f04.p1k chr12 907 38 9976 10845 C 870 98.97 1277 accept_tel 0 ALIGNMENT 23 YS2-16f04.q1k chr05 66 40 571473 571500 C 27 96.30 1325 reject_low 32,38 ALIGNMENT 0 YS2-16f04.q1k chr08 875 849 557371 557370 C 27 0.00 1325 reject_low 34 ALIGNMENT 561 YS2-16f04.p1k chr05 853 98 5400 6136 C 756 93.52 1277 reject_low 40 ALIGNMENT 25 YS2-16f04.p1k chr05 70 38 6137 6170 C 33 93.94 1277 reject_low 39,40 ALIGNMENT 561 YS2-16f04.q1k chr05 93 848 5400 6136 F 756 93.52 1325 reject_low 39 ALIGNMENT 719 YS2-16f04.q1k chr08 40 817 4173 4951 F 778 98.33 1325 reject_low 20 ALIGNMENT 52 YS2-16f05.q1k chr13 141 35 372696 372801 C 107 85.98 1324 reject_low 25 ALIGNMENT 0 YS2-16f05.q1k chr09 879 140 300410 300409 C 740 0.00 1324 reject_low 28 ALIGNMENT 52 YS2-16f05.q1k chr13 141 35 378284 378389 C 107 85.98 1324 reject_low 26 ALIGNMENT 82 YS2-16f05.q1k chr09 563 481 336338 336420 C 83 100.00 1324 reject_low 3 ALIGNMENT 0 YS2-16f05.q1k chr13 564 879 463632 463631 F 316 0.00 1324 reject_low 11 ALIGNMENT 77 YS2-16f05.q1k chr12 483 564 427132 427213 F 82 98.78 1324 reject_low 6 ALIGNMENT 0 YS2-16f05.q1k chr09 142 879 325162 325161 F 738 0.00 1324 reject_low 30 ALIGNMENT 0 YS2-16f05.q1k chr12 62 482 427132 427131 F 421 0.00 1324 reject_low 6 ALIGNMENT 0 YS2-16f05.q1k chr10 564 879 541501 541500 F 316 0.00 1324 reject_low 1 ALIGNMENT 0 YS2-16f05.q1k chr11 483 62 513046 513045 C 422 0.00 1324 reject_low 12 ALIGNMENT 59 YS2-16f05.q1k chr14 41 141 524964 525063 F 101 89.11 1324 reject_low 21 ALIGNMENT 59 YS2-16f05.q1k chr14 41 141 519398 519497 F 101 89.11 1324 reject_low 20 ALIGNMENT 0 YS2-16f05.q1k chr13 879 142 357005 357004 C 738 0.00 1324 reject_low 22 ALIGNMENT 76 YS2-16f05.q1k chr04 484 564 568961 569041 F 81 98.77 1324 reject_low 13 ALIGNMENT 0 YS2-16f05.q1k chr07 483 62 544653 544652 C 422 0.00 1324 reject_low 8 ALIGNMENT 0 YS2-16f05.q1k chr15 564 879 572037 572036 F 316 0.00 1324 reject_low 2 ALIGNMENT 61 YS2-16f05.q1k chr01 141 35 165827 165932 C 107 88.79 1324 reject_low 18 ALIGNMENT 0 YS2-16f05.q1k chr03 879 144 124130 124129 C 736 0.00 1324 reject_low 17 ALIGNMENT 57 YS2-16f05.q1k chr10 132 41 354459 354549 C 92 90.22 1324 reject_low 24 ALIGNMENT 0 YS2-16f05.q1k chr09 879 564 336339 336338 C 316 0.00 1324 reject_low 3 ALIGNMENT 0 YS2-16f05.q1k chr09 480 62 336421 336420 C 419 0.00 1324 reject_low 3 ALIGNMENT 0 YS2-16f05.q1k chr09 879 564 324294 324293 C 316 0.00 1324 reject_low 9 ALIGNMENT 0 YS2-16f05.q1k chr07 565 879 531694 531693 F 315 0.00 1324 reject_low 14 ALIGNMENT 0 YS2-16f05.q1k chr03 132 879 151838 151837 F 748 0.00 1324 reject_low 29 ALIGNMENT 78 YS2-16f05.q1k chr02 484 563 405954 406033 F 80 100.00 1324 reject_low 7 ALIGNMENT 0 YS2-16f05.q1k chr07 879 564 544574 544573 C 316 0.00 1324 reject_low 8 ALIGNMENT 38 YS2-16f05.q1k chr09 35 141 325055 325162 F 107 82.24 1324 reject_low 30 ALIGNMENT 0 YS2-16f05.q1k chr13 879 142 362587 362586 C 738 0.00 1324 reject_low 23 ALIGNMENT 0 YS2-16f05.q1k chr12 562 879 793995 793994 F 318 0.00 1324 reject_low 5 ALIGNMENT 0 YS2-16f05.q1k chr10 879 133 354460 354459 C 747 0.00 1324 reject_low 24 ALIGNMENT 1022 YS2-16f05.p1k chr10 1296 38 205649 206909 C 1259 95.00 1334 accept 0 ALIGNMENT 83 YS2-16f05.q1k chr15 480 563 571954 572037 F 84 100.00 1324 reject_low 2 ALIGNMENT 0 YS2-16f05.q1k chr14 879 563 519094 519093 C 317 0.00 1324 reject_low 15 ALIGNMENT 1017 YS2-16f05.q1k chr10 35 1254 204208 205429 F 1220 95.82 1324 accept 0 ALIGNMENT 34 YS2-16f05.q1k chr10 131 41 354770 354857 C 91 83.52 1324 reject_low 32 ALIGNMENT 0 YS2-16f05.q1k chr13 120 879 184479 184478 F 760 0.00 1324 reject_low 27 ALIGNMENT 0 YS2-16f05.q1k chr13 62 483 463553 463552 F 422 0.00 1324 reject_low 11 ALIGNMENT 0 YS2-16f05.q1k chr13 879 142 372697 372696 C 738 0.00 1324 reject_low 25 ALIGNMENT 0 YS2-16f05.q1k chr02 564 879 406033 406032 F 316 0.00 1324 reject_low 7 ALIGNMENT 83 YS2-16f05.q1k chr10 480 563 541418 541501 F 84 100.00 1324 reject_low 1 ALIGNMENT 0 YS2-16f05.q1k chr14 491 62 519164 519163 C 430 0.00 1324 reject_low 15 ALIGNMENT 40 YS2-16f05.q1k chr03 35 131 151743 151838 F 97 83.51 1324 reject_low 29 ALIGNMENT 0 YS2-16f05.q1k chr03 120 879 149785 149784 F 760 0.00 1324 reject_low 31 ALIGNMENT 55 YS2-16f05.q1k chr13 141 35 362586 362691 C 107 86.92 1324 reject_low 23 ALIGNMENT 0 YS2-16f05.q1k chr10 566 879 355453 355452 F 314 0.00 1324 reject_low 4 ALIGNMENT 0 YS2-16f05.q1k chr02 62 483 405954 405953 F 422 0.00 1324 reject_low 7 ALIGNMENT 0 YS2-16f05.q1k chr01 879 144 160238 160237 C 736 0.00 1324 reject_low 16 ALIGNMENT 0 YS2-16f05.q1k chr12 565 879 427213 427212 F 315 0.00 1324 reject_low 6 ALIGNMENT 78 YS2-16f05.q1k chr13 484 563 463553 463632 F 80 100.00 1324 reject_low 11 ALIGNMENT 0 YS2-16f05.q1k chr09 483 62 324373 324372 C 422 0.00 1324 reject_low 9 ALIGNMENT 0 YS2-16f05.q1k chr01 879 142 165828 165827 C 738 0.00 1324 reject_low 18 ALIGNMENT 78 YS2-16f05.q1k chr10 563 484 374332 374411 C 80 100.00 1324 reject_low 10 ALIGNMENT 0 YS2-16f05.q1k chr04 565 879 569041 569040 F 315 0.00 1324 reject_low 13 ALIGNMENT 0 YS2-16f05.q1k chr13 879 142 378285 378284 C 738 0.00 1324 reject_low 26 ALIGNMENT 54 YS2-16f05.q1k chr13 35 119 184396 184479 F 85 90.59 1324 reject_low 27 ALIGNMENT 78 YS2-16f05.q1k chr07 563 484 544573 544652 C 80 100.00 1324 reject_low 8 ALIGNMENT 76 YS2-16f05.q1k chr07 484 564 531614 531694 F 81 98.77 1324 reject_low 14 ALIGNMENT 0 YS2-16f05.q1k chr15 62 479 571954 571953 F 418 0.00 1324 reject_low 2 ALIGNMENT 78 YS2-16f05.q1k chr09 563 484 324293 324372 C 80 100.00 1324 reject_low 9 ALIGNMENT 0 YS2-16f05.q1k chr10 62 479 541418 541417 F 418 0.00 1324 reject_low 1 ALIGNMENT 0 YS2-16f05.q1k chr10 879 564 374333 374332 C 316 0.00 1324 reject_low 10 ALIGNMENT 0 YS2-16f05.q1k chr03 879 142 168596 168595 C 738 0.00 1324 reject_low 19 ALIGNMENT 70 YS2-16f05.q1k chr14 562 492 519093 519163 C 71 100.00 1324 reject_low 15 ALIGNMENT 46 YS2-16f05.q1k chr09 139 41 300409 300508 C 99 85.86 1324 reject_low 28 ALIGNMENT 79 YS2-16f05.q1k chr12 482 561 793916 793995 F 80 100.00 1324 reject_low 5 ALIGNMENT 80 YS2-16f05.q1k chr10 484 565 355372 355453 F 82 100.00 1324 reject_low 4 ALIGNMENT 0 YS2-16f05.q1k chr12 62 481 793916 793915 F 420 0.00 1324 reject_low 5 ALIGNMENT 0 YS2-16f05.q1k chr14 142 879 525063 525062 F 738 0.00 1324 reject_low 21 ALIGNMENT 60 YS2-16f05.q1k chr03 143 43 124129 124228 C 101 89.11 1324 reject_low 17 ALIGNMENT 0 YS2-16f05.q1k chr14 142 879 519497 519496 F 738 0.00 1324 reject_low 20 ALIGNMENT 36 YS2-16f05.q1k chr03 35 119 149702 149785 F 85 83.53 1324 reject_low 31 ALIGNMENT 59 YS2-16f05.q1k chr03 141 41 168595 168694 C 101 89.11 1324 reject_low 19 ALIGNMENT 0 YS2-16f05.q1k chr04 62 483 568961 568960 F 422 0.00 1324 reject_low 13 ALIGNMENT 64 YS2-16f05.q1k chr01 143 35 160237 160344 C 109 88.99 1324 reject_low 16 ALIGNMENT 78 YS2-16f05.q1k chr11 562 484 512967 513045 C 79 100.00 1324 reject_low 12 ALIGNMENT 0 YS2-16f05.q1k chr10 879 132 354771 354770 C 748 0.00 1324 reject_low 32 ALIGNMENT 0 YS2-16f05.q1k chr07 62 483 531614 531613 F 422 0.00 1324 reject_low 14 ALIGNMENT 0 YS2-16f05.q1k chr11 879 563 512968 512967 C 317 0.00 1324 reject_low 12 ALIGNMENT 0 YS2-16f05.q1k chr10 62 483 355372 355371 F 422 0.00 1324 reject_low 4 ALIGNMENT 55 YS2-16f05.q1k chr13 141 35 357004 357109 C 107 86.92 1324 reject_low 22 ALIGNMENT 0 YS2-16f05.q1k chr10 483 62 374412 374411 C 422 0.00 1324 reject_low 10 ALIGNMENT 1063 YS2-16f06.q1k chr12 47 1270 921963 923194 F 1224 96.32 1320 accept_chi 0 ALIGNMENT 868 YS2-16f06.p1k chr12 35 1032 44939 45955 F 998 97.70 1249 accept_chi 1 ALIGNMENT 353 YS2-16f07.q1k chr09 70 477 8793 9200 F 408 95.83 1367 reject_low 10 ALIGNMENT 0 YS2-16f07.q1k chr03 897 460 290000 289999 C 438 0.00 1367 reject_low 21 ALIGNMENT 0 YS2-16f07.q1k chr09 81 62 434285 434284 C 20 0.00 1367 reject_low 16 ALIGNMENT 0 YS2-16f07.q1k chr15 478 897 11955 11954 F 420 0.00 1367 reject_low 9 ALIGNMENT 0 YS2-16f07.q1k chr15 81 62 1083194 1083193 C 20 0.00 1367 reject_low 19 ALIGNMENT 1032 YS2-16f07.p1k chr02 37 1206 804196 805378 F 1170 97.26 1320 accept 0 ALIGNMENT 0 YS2-16f07.q1k chr04 897 467 1523199 1523198 C 431 0.00 1367 reject_low 12 ALIGNMENT 0 YS2-16f07.q1k chr08 453 897 12303 12302 F 445 0.00 1367 reject_low 8 ALIGNMENT 412 YS2-16f07.q1k chr14 533 46 781817 782304 C 488 95.08 1367 reject_low 4 ALIGNMENT 0 YS2-16f07.q1k chr16 478 897 8352 8351 F 420 0.00 1367 reject_low 20 ALIGNMENT 230 YS2-16f07.q1k chr15 477 82 1082789 1083193 C 396 86.62 1367 reject_low 19 ALIGNMENT 232 YS2-16f07.q1k chr13 476 82 922595 922998 C 395 86.84 1367 reject_low 18 ALIGNMENT 0 YS2-16f07.q1k chr01 450 897 177038 177037 F 448 0.00 1367 reject_low 17 ALIGNMENT 347 YS2-16f07.q1k chr08 46 452 11897 12303 F 407 95.33 1367 reject_low 8 ALIGNMENT 0 YS2-16f07.q1k chr09 478 897 9200 9199 F 420 0.00 1367 reject_low 10 ALIGNMENT 344 YS2-16f07.q1k chr15 46 477 11524 11955 F 432 93.52 1367 reject_low 9 ALIGNMENT 0 YS2-16f07.q1k chr13 897 477 922596 922595 C 421 0.00 1367 reject_low 18 ALIGNMENT 237 YS2-16f07.q1k chr09 533 82 433825 434284 C 452 84.73 1367 reject_low 16 ALIGNMENT 227 YS2-16f07.q1k chr01 46 449 176631 177038 F 404 86.39 1367 reject_low 17 ALIGNMENT 337 YS2-16f07.q1k chr05 542 70 63624 64090 C 473 91.33 1367 reject_low 5 ALIGNMENT 0 YS2-16f07.q1k chr05 897 543 63625 63624 C 355 0.00 1367 reject_low 5 ALIGNMENT 0 YS2-16f07.q1k chr10 478 897 9183 9182 F 420 0.00 1367 reject_low 11 ALIGNMENT 245 YS2-16f07.q1k chr11 70 533 1811 2282 F 464 84.91 1367 reject_low 15 ALIGNMENT 0 YS2-16f07.q1k chr03 279 62 290176 290175 C 218 0.00 1367 reject_low 21 ALIGNMENT 344 YS2-16f07.q1k chr01 70 477 1807 2214 F 408 95.10 1367 reject_low 13 ALIGNMENT 353 YS2-16f07.q1k chr07 46 477 6266 6697 F 432 94.21 1367 reject_low 6 ALIGNMENT 414 YS2-16f07.q1k chr02 46 533 7581 8069 F 488 95.29 1367 reject_low 2 ALIGNMENT 0 YS2-16f07.q1k chr03 81 62 308157 308156 C 20 0.00 1367 reject_low 14 ALIGNMENT 1008 YS2-16f07.q1k chr02 1213 46 808255 809437 C 1168 96.06 1367 accept 0 ALIGNMENT 0 YS2-16f07.p1k chr07 62 714 1076135 1076134 F 653 0.00 1320 reject_low 1 ALIGNMENT 353 YS2-16f07.q1k chr10 70 477 8776 9183 F 408 95.83 1367 reject_low 11 ALIGNMENT 0 YS2-16f07.q1k chr12 534 897 13546 13545 F 364 0.00 1367 reject_low 3 ALIGNMENT 0 YS2-16f07.q1k chr12 897 478 1062872 1062871 C 420 0.00 1367 reject_low 7 ALIGNMENT 0 YS2-16f07.q1k chr02 534 897 8069 8068 F 364 0.00 1367 reject_low 2 ALIGNMENT 0 YS2-16f07.q1k chr09 897 534 433826 433825 C 364 0.00 1367 reject_low 16 ALIGNMENT 0 YS2-16f07.q1k chr15 897 478 1082790 1082789 C 420 0.00 1367 reject_low 19 ALIGNMENT 0 YS2-16f07.q1k chr14 897 534 781818 781817 C 364 0.00 1367 reject_low 4 ALIGNMENT 0 YS2-16f07.q1k chr03 897 534 307697 307696 C 364 0.00 1367 reject_low 14 ALIGNMENT 353 YS2-16f07.q1k chr12 477 46 1062871 1063302 C 432 94.21 1367 reject_low 7 ALIGNMENT 53 YS2-16f07.q1k chr03 459 280 289999 290175 C 180 78.33 1367 reject_low 21 ALIGNMENT 952 YS2-16f07.q1k chr07 1212 46 1079516 1080698 C 1167 94.52 1367 reject_low 1 ALIGNMENT 0 YS2-16f07.q1k chr16 62 81 7948 7947 F 20 0.00 1367 reject_low 20 ALIGNMENT 0 YS2-16f07.q1k chr07 478 897 6697 6696 F 420 0.00 1367 reject_low 6 ALIGNMENT 412 YS2-16f07.q1k chr12 46 533 13059 13546 F 488 95.08 1367 reject_low 3 ALIGNMENT 0 YS2-16f07.q1k chr01 478 897 2214 2213 F 420 0.00 1367 reject_low 13 ALIGNMENT 351 YS2-16f07.q1k chr04 466 70 1523198 1523594 C 397 96.47 1367 reject_low 12 ALIGNMENT 230 YS2-16f07.q1k chr16 82 477 7948 8352 F 396 86.62 1367 reject_low 20 ALIGNMENT 274 YS2-16f07.q1k chr03 533 82 307696 308156 C 452 87.39 1367 reject_low 14 ALIGNMENT 0 YS2-16f07.q1k chr13 81 62 922999 922998 C 20 0.00 1367 reject_low 18 ALIGNMENT 0 YS2-16f07.q1k chr11 534 897 2282 2281 F 364 0.00 1367 reject_low 15 ALIGNMENT 353 YS2-16f07.p1k chr07 715 1206 1076135 1076638 F 492 92.89 1320 reject_low 1 ALIGNMENT 569 YS2-16f08.p1k chr12 32 639 644757 645366 F 608 99.34 639 accept_chi 1 ALIGNMENT 0 YS2-16f08.q1k vc_3 650 62 2515 2514 C 589 0.00 693 reject_low 4 ALIGNMENT 0 YS2-16f08.q1k vc_5 654 62 5064 5063 C 593 0.00 693 reject_low 6 ALIGNMENT 0 YS2-16f08.q1k vc_5 654 62 37 36 C 593 0.00 693 reject_low 8 ALIGNMENT 42 YS2-16f08.q1k vc_4 651 693 5829 5871 F 43 100.00 693 reject_low 5 ALIGNMENT 0 YS2-16f08.q1k vc_1 650 62 2515 2514 C 589 0.00 693 reject_low 2 ALIGNMENT 39 YS2-16f08.q1k vc_5 693 655 5025 5063 C 39 100.00 693 reject_low 6 ALIGNMENT 42 YS2-16f08.q1k vc_3 693 651 2472 2514 C 43 100.00 693 reject_low 4 ALIGNMENT 42 YS2-16f08.q1k vc_1 693 651 2472 2514 C 43 100.00 693 reject_low 2 ALIGNMENT 36 YS2-16f08.q1k vc_5 690 655 1 36 C 36 100.00 693 reject_low 8 ALIGNMENT 38 YS2-16f08.q1k vc_7 656 693 13525 13562 F 38 100.00 693 reject_low 7 ALIGNMENT 42 YS2-16f08.q1k vc_2 693 651 2105 2147 C 43 100.00 693 reject_low 3 ALIGNMENT 0 YS2-16f08.q1k vc_4 62 650 5829 5828 F 589 0.00 693 reject_low 5 ALIGNMENT 581 YS2-16f08.q1k chr12 652 37 644750 645366 C 616 99.51 693 accept_chi 0 ALIGNMENT 0 YS2-16f08.q1k vc_2 650 62 2148 2147 C 589 0.00 693 reject_low 3 ALIGNMENT 0 YS2-16f08.q1k vc_7 62 655 13525 13524 F 594 0.00 693 reject_low 7 ALIGNMENT 0 YS2-16f08.q1k chr12 693 653 644751 644750 C 41 0.00 693 accept_chi 0 ALIGNMENT 304 YS2-16f10.q1k chr16 28 359 211243 211575 F 332 98.49 1372|0,3 accept 0 ALIGNMENT 727 YS2-16f10.p1k chr16 1140 42 212138 213241 C 1099 90.63 1353 accept 0 ALIGNMENT 0 YS2-16f10.q1k chr16 357 356 211573 211909 F 0 0.00 1372 accept 0 ALIGNMENT 553 YS2-16f10.q1k chr16 353 1155 211906 212700 F 803 91.91 1372|4,0 accept 0 ALIGNMENT 939 YS2-16f11.q1k chr07 1305 45 18685 19945 C 1261 92.62 1374 ambiguous_tel 1 ALIGNMENT 1008 YS2-16f11.p1k chr04 42 1226 1229239 1230423 F 1185 96.29 1365 accept 0 ALIGNMENT 989 YS2-16f13.p1k chr04 31 1121 1196961 1198062 F 1091 97.89 1294 accept 0 ALIGNMENT 987 YS2-16f13.q1k chr04 1230 41 1198469 1199661 C 1190 95.29 1360 accept 0 ALIGNMENT 65 YS2-16f14.q1k vc_4 304 238 6273 6339 C 67 100.00 884 reject_low 9 ALIGNMENT 0 YS2-16f14.q1k vc_4 237 62 113 112 C 176 0.00 884 reject_low 8 ALIGNMENT 0 YS2-16f14.q1k vc_7 53 54 5172 6360 C 0 0.00 884 reject_low 7 ALIGNMENT 0 YS2-16f14.q1k vc_1 304 332 2991 2990 F 29 0.00 884 reject_low 3 ALIGNMENT 65 YS2-16f14.q1k vc_4 304 238 46 112 C 67 100.00 884 reject_low 8 ALIGNMENT 51 YS2-16f14.q1k vc_7 54 3 6360 6411 C 52 100.00 884|1,0 reject_low 7 ALIGNMENT 97 YS2-16f14.q1k vc_7 421 305 4583 4699 C 117 95.73 884 reject_low 7 ALIGNMENT 0 YS2-16f14.q1k vc_4 305 307 1615 1878 F 3 0.00 884 reject_low 6 ALIGNMENT 0 YS2-16f14.q1k vc_3 304 332 2991 2990 F 29 0.00 884 reject_low 5 ALIGNMENT 0 YS2-16f14.q1k vc_4 62 237 1548 1547 F 176 0.00 884 reject_low 6 ALIGNMENT 189 YS2-16f14.q1k vc_4 308 674 1879 2251 F 367 85.29 884 reject_low 6 ALIGNMENT 65 YS2-16f14.q1k vc_4 238 304 1548 1614 F 67 100.00 884 reject_low 6 ALIGNMENT 0 YS2-16f14.q1k vc_4 332 305 6274 6273 C 28 0.00 884 reject_low 9 ALIGNMENT 302 YS2-16f14.q1k vc_2 1 303 2322 2624 F 303 100.00 884 reject_low 4 ALIGNMENT 0 YS2-16f14.q1k vc_7 304 304 4700 4921 C 1 0.00 884 reject_low 7 ALIGNMENT 0 YS2-16f14.q1k vc_2 304 332 2624 2623 F 29 0.00 884 reject_low 4 ALIGNMENT 492 YS2-16f14.q1k vc_7 614 1 1949 2569 C 614 94.14 884 reject_low 1 ALIGNMENT 0 YS2-16f14.q1k vc_4 332 305 47 46 C 28 0.00 884 reject_low 8 ALIGNMENT 395 YS2-16f14.q1k vc_4 421 1 5232 5654 C 421 98.34 884 reject_low 2 ALIGNMENT 302 YS2-16f14.q1k vc_3 1 303 2689 2991 F 303 100.00 884 reject_low 5 ALIGNMENT 302 YS2-16f14.q1k vc_1 1 303 2689 2991 F 303 100.00 884 reject_low 3 ALIGNMENT 0 YS2-16f14.q1k vc_4 237 62 6340 6339 C 176 0.00 884 reject_low 9 ALIGNMENT 498 YS2-16f14.q1k vc_5 1 674 2556 3235 F 674 91.99 884 reject_vc 0 ALIGNMENT 247 YS2-16f14.q1k vc_7 303 53 4922 5172 C 251 99.60 884|0,1 reject_low 7 ALIGNMENT 985 YS2-16f15.p1k chr15 1278 36 504206 505459 C 1243 94.45 1305 accept 0 ALIGNMENT 945 YS2-16f15.q1k chr15 39 1113 500456 501547 F 1075 97.77 1306 accept 0 ALIGNMENT 0 YS2-16f16.q1k chr12 798 174 451420 451419 C 625 0.00 1371 reject_low 2 ALIGNMENT 0 YS2-16f16.p1k chr12 62 492 485696 485695 F 431 0.00 1340 reject_low 8 ALIGNMENT 0 YS2-16f16.q1k chr12 899 62 472583 472582 C 838 0.00 1371 reject_low 9 ALIGNMENT 94 YS2-16f16.p1k chr06 233 126 31622 31729 C 108 98.15 1340 reject_low 7 ALIGNMENT 119 YS2-16f16.p1k chr12 493 611 485696 485814 F 119 100.00 1340 reject_low 8 ALIGNMENT 0 YS2-16f16.p1k chr12 62 492 489348 489347 F 431 0.00 1340 reject_low 6 ALIGNMENT 143 YS2-16f16.q1k chr12 1124 900 468704 468930 C 225 88.00 1371 reject_low 1 ALIGNMENT 0 YS2-16f16.p1k chr12 62 492 482044 482043 F 431 0.00 1340 reject_low 3 ALIGNMENT 0 YS2-16f16.q1k chr12 884 62 489482 489481 C 823 0.00 1371 reject_low 3 ALIGNMENT 0 YS2-16f16.p1k chr06 799 234 31623 31622 C 566 0.00 1340 reject_low 7 ALIGNMENT 787 YS2-16f16.q1k chr12 1124 43 459567 460687 C 1082 92.24 1371 accept 0 ALIGNMENT 543 YS2-16f16.p1k chr12 42 611 468360 468930 F 570 99.47 1340 reject_low 1 ALIGNMENT 0 YS2-16f16.p1k chr06 125 62 31730 31729 C 64 0.00 1340 reject_low 7 ALIGNMENT 128 YS2-16f16.p1k chr12 493 626 489348 489481 F 134 98.51 1340 reject_low 6 ALIGNMENT 104 YS2-16f16.q1k chr12 1019 900 482042 482162 C 120 95.83 1371 reject_low 4 ALIGNMENT 119 YS2-16f16.p1k chr12 493 611 482044 482162 F 119 100.00 1340 reject_low 3 ALIGNMENT 0 YS2-16f16.p1k chr12 612 799 472582 472581 F 188 0.00 1340 reject_low 4,5 ALIGNMENT 0 YS2-16f16.q1k chr12 899 62 485815 485814 C 838 0.00 1371 reject_low 5 ALIGNMENT 0 YS2-16f16.p1k chr12 612 799 482162 482161 F 188 0.00 1340 reject_low 3 ALIGNMENT 0 YS2-16f16.p1k chr12 62 492 472464 472463 F 431 0.00 1340 reject_low 4,5 ALIGNMENT 0 YS2-16f16.p1k chr12 612 799 468930 468929 F 188 0.00 1340 reject_low 1 ALIGNMENT 0 YS2-16f16.q1k chr12 899 62 482163 482162 C 838 0.00 1371 reject_low 4 ALIGNMENT 121 YS2-16f16.q1k chr12 173 43 451419 451550 C 131 97.71 1371 reject_low 2 ALIGNMENT 104 YS2-16f16.q1k chr12 1019 900 472462 472582 C 120 95.83 1371 reject_low 9 ALIGNMENT 0 YS2-16f16.p1k chr12 612 799 485814 485813 F 188 0.00 1340 reject_low 8 ALIGNMENT 110 YS2-16f16.q1k chr12 1019 885 489346 489481 C 135 94.07 1371 reject_low 3 ALIGNMENT 0 YS2-16f16.p1k chr12 627 799 489481 489480 F 173 0.00 1340 reject_low 6 ALIGNMENT 824 YS2-16f16.p1k chr12 42 1208 459223 460396 F 1167 92.89 1340 accept 0 ALIGNMENT 0 YS2-16f16.q1k chr12 899 62 468931 468930 C 838 0.00 1371 reject_low 1 ALIGNMENT 104 YS2-16f16.q1k chr12 1019 900 485694 485814 C 120 95.83 1371 reject_low 5 ALIGNMENT 119 YS2-16f16.p1k chr12 493 611 472464 472582 F 119 100.00 1340 reject_low 4,5 ALIGNMENT 55 YS2-16f17.q1k chrm 509 449 53663 53723 C 61 96.72 1379 reject_low 3 ALIGNMENT 0 YS2-16f17.p1k chrm 95 96 72132 77051 C 0 0.00 1357 reject_bad_break 0 ALIGNMENT 0 YS2-16f17.p1k chrm 62 209 71346 71345 F 148 0.00 1357 reject_low 1 ALIGNMENT 526 YS2-16f17.q1k chrm 32 682 70041 70691 F 651 99.85 1379 reject_bad_break 0 ALIGNMENT 0 YS2-16f17.p1k chrm 114 772 2663 2662 F 659 0.00 1357 reject_low 2 ALIGNMENT 0 YS2-16f17.q1k chrm 696 578 82786 82785 C 119 0.00 1379 reject_low 1 ALIGNMENT 0 YS2-16f17.q1k chrm 696 510 53664 53663 C 187 0.00 1379 reject_low 3 ALIGNMENT 76 YS2-16f17.q1k chrm 577 438 82785 82920 C 140 87.86 1379 reject_low 1 ALIGNMENT 450 YS2-16f17.p1k chrm 883 83 71358 72144 C 801 96.25 1357|0,13 reject_bad_break 0 ALIGNMENT 0 YS2-16f17.q1k chrm 437 62 82921 82920 C 376 0.00 1379 reject_low 1 ALIGNMENT 0 YS2-16f17.q1k chrm 448 62 53724 53723 C 387 0.00 1379 reject_low 3 ALIGNMENT 43 YS2-16f17.p1k chrm 48 113 2599 2663 F 66 90.91 1357 reject_low 2 ALIGNMENT 0 YS2-16f17.p1k chrm 239 772 71374 71373 F 534 0.00 1357 reject_low 1 ALIGNMENT 26 YS2-16f17.p1k chrm 210 238 71346 71374 F 29 100.00 1357 reject_low 1 ALIGNMENT 46 YS2-16f17.p1k chrm 107 47 77040 77100 C 61 91.80 1357|12,0 reject_bad_break 0 ALIGNMENT 493 YS2-16f19.p1k vc_6 1 641 3712 4351 F 641 92.98 759 reject_vc 6 ALIGNMENT 496 YS2-16f19.p1k vc_3 748 1 1011 1749 C 748 90.24 759 reject_vc 3 ALIGNMENT 499 YS2-16f19.p1k vc_5 748 1 3931 4669 C 748 90.37 759 reject_vc 0 ALIGNMENT 490 YS2-16f19.p1k vc_7 1 748 13918 14656 F 748 89.97 759 reject_vc 5 ALIGNMENT 496 YS2-16f19.p1k vc_2 748 1 1011 1749 C 748 90.24 759 reject_vc 2 ALIGNMENT 496 YS2-16f19.p1k vc_1 748 1 1011 1749 C 748 90.24 759 reject_vc 1 ALIGNMENT 490 YS2-16f19.p1k vc_7 1 748 456 1194 F 748 89.97 759 reject_vc 4 ALIGNMENT 1045 YS2-16f20.p1k chr16 1165 31 425215 426362 C 1135 97.80 1235 accept 0 ALIGNMENT 1013 YS2-16f20.q1k chr16 43 1196 420360 421526 F 1154 97.14 1309 accept 0 ALIGNMENT 119 YS2-16f21.q1k chr12 756 1050 451419 451714 F 295 83.73 1315 manual 1 ALIGNMENT 246 YS2-16f21.p1k chr12 362 34 451419 451760 C 329 93.62 1308 reject_low 2 ALIGNMENT 0 YS2-16f21.p1k chr12 792 363 451420 451419 C 430 0.00 1308 reject_low 2 ALIGNMENT 0 YS2-16f21.p1k chr12 877 62 460017 460016 C 816 0.00 1308 manual 0 ALIGNMENT 57 YS2-16f21.p1k chr12 975 878 459922 460016 C 98 90.82 1308 manual 0 ALIGNMENT 667 YS2-16f21.q1k chr12 37 1050 459810 460851 F 1014 90.93 1315 manual 0 ALIGNMENT 664 YS2-16f21.p1k chr12 1104 34 459807 460897 C 1071 90.38 1308 manual 1 ALIGNMENT 0 YS2-16f21.q1k chr12 62 755 451419 451418 F 694 0.00 1315 manual 1 ALIGNMENT 697 YS2-16f22.q1k chr12 749 32 425824 426540 C 718 99.58 749 accept 0 ALIGNMENT 700 YS2-16f22.p1k chr12 32 747 425823 426539 F 716 99.86 747 accept 0 ALIGNMENT 152 YS2-16f23.p1k chr02 196 40 243691 243847 C 157 99.36 215 accept_chi 0 ALIGNMENT 0 YS2-16f23.q1k vc_5 191 62 5064 5063 C 130 0.00 230 reject_low 5 ALIGNMENT 0 YS2-16f23.q1k vc_1 188 62 2514 2513 C 127 0.00 230 reject_low 2 ALIGNMENT 42 YS2-16f23.q1k vc_3 230 189 2472 2513 C 42 100.00 230 reject_low 3 ALIGNMENT 0 YS2-16f23.q1k vc_4 62 188 5830 5829 F 127 0.00 230 reject_low 4 ALIGNMENT 0 YS2-16f23.p1k chr02 215 197 243692 243691 C 19 0.00 215 accept_chi 0 ALIGNMENT 0 YS2-16f23.q1k vc_3 188 62 2514 2513 C 127 0.00 230 reject_low 3 ALIGNMENT 36 YS2-16f23.q1k vc_5 227 192 1 36 C 36 100.00 230 reject_low 7 ALIGNMENT 39 YS2-16f23.q1k vc_5 230 192 5025 5063 C 39 100.00 230 reject_low 5 ALIGNMENT 42 YS2-16f23.q1k vc_1 230 189 2472 2513 C 42 100.00 230 reject_low 2 ALIGNMENT 0 YS2-16f23.q1k chr02 191 230 243852 243851 F 40 0.00 230 accept_chi 1 ALIGNMENT 0 YS2-16f23.q1k vc_7 62 192 13525 13524 F 131 0.00 230 reject_low 6 ALIGNMENT 0 YS2-16f23.q1k vc_5 191 62 37 36 C 130 0.00 230 reject_low 7 ALIGNMENT 38 YS2-16f23.q1k vc_7 193 230 13525 13562 F 38 100.00 230 reject_low 6 ALIGNMENT 42 YS2-16f23.q1k vc_4 189 230 5830 5871 F 42 100.00 230 reject_low 4 ALIGNMENT 145 YS2-16f23.q1k chr02 35 190 243696 243852 F 156 98.08 230 accept_chi 1 ALIGNMENT 39 YS2-16g01.q1k vc_5 282 244 5025 5063 C 39 100.00 282 reject_low 12 ALIGNMENT 0 YS2-16g01.q1k vc_4 62 239 5829 5828 F 178 0.00 282 reject_low 11 ALIGNMENT 42 YS2-16g01.q1k vc_3 282 240 2472 2514 C 43 100.00 282 reject_low 10 ALIGNMENT 42 YS2-16g01.q1k vc_2 282 240 2105 2147 C 43 100.00 282 reject_low 9 ALIGNMENT 42 YS2-16g01.q1k vc_4 240 282 5829 5871 F 43 100.00 282 reject_low 11 ALIGNMENT 0 YS2-16g01.q1k vc_1 239 62 2515 2514 C 178 0.00 282 reject_low 8 ALIGNMENT 38 YS2-16g01.q1k vc_7 245 282 13525 13562 F 38 100.00 282 reject_low 13 ALIGNMENT 432 YS2-16g01.p1k vc_5 654 1 4014 4669 C 654 89.45 697 reject_vc 1 ALIGNMENT 429 YS2-16g01.p1k vc_3 654 1 1094 1749 C 654 89.30 697 reject_vc 5 ALIGNMENT 0 YS2-16g01.q1k vc_7 62 244 13525 13524 F 183 0.00 282 reject_low 13 ALIGNMENT 429 YS2-16g01.p1k vc_2 654 1 1094 1749 C 654 89.30 697 reject_vc 4 ALIGNMENT 0 YS2-16g01.q1k vc_2 239 62 2148 2147 C 178 0.00 282 reject_low 9 ALIGNMENT 197 YS2-16g01.q1k chr04 35 241 897394 897600 F 207 100.00 282 accept 0 ALIGNMENT 429 YS2-16g01.p1k vc_1 654 1 1094 1749 C 654 89.30 697 reject_vc 3 ALIGNMENT 0 YS2-16g01.q1k vc_5 243 62 5064 5063 C 182 0.00 282 reject_low 12 ALIGNMENT 0 YS2-16g01.q1k vc_5 243 62 37 36 C 182 0.00 282 reject_low 14 ALIGNMENT 432 YS2-16g01.p1k vc_6 1 654 3712 4367 F 654 89.45 697 reject_vc 2 ALIGNMENT 42 YS2-16g01.q1k vc_1 282 240 2472 2514 C 43 100.00 282 reject_low 8 ALIGNMENT 423 YS2-16g01.p1k vc_7 1 654 456 1111 F 654 88.99 697 reject_vc 6 ALIGNMENT 0 YS2-16g01.q1k chr04 242 282 897600 897599 F 41 0.00 282 accept 0 ALIGNMENT 423 YS2-16g01.p1k vc_7 1 654 13918 14573 F 654 88.99 697 reject_vc 7 ALIGNMENT 0 YS2-16g01.q1k vc_3 239 62 2515 2514 C 178 0.00 282 reject_low 10 ALIGNMENT 36 YS2-16g01.q1k vc_5 279 244 1 36 C 36 100.00 282 reject_low 14 ALIGNMENT 1074 YS2-16g02.q1k chr15 1286 41 191743 192980 C 1246 96.63 1313 accept 0 ALIGNMENT 1054 YS2-16g02.p1k chr15 36 1291 187590 188851 F 1256 96.18 1308 accept 0 ALIGNMENT 115 YS2-16g03.q1k vc_7 421 305 4583 4699 C 117 100.00 911 reject_low 8 ALIGNMENT 302 YS2-16g03.q1k vc_3 1 303 2689 2991 F 303 100.00 911 reject_low 7 ALIGNMENT 0 YS2-16g03.q1k vc_4 305 307 1615 1878 F 3 0.00 911 reject_vc 3 ALIGNMENT 0 YS2-16g03.q1k vc_4 62 237 1548 1547 F 176 0.00 911 reject_vc 3 ALIGNMENT 691 YS2-16g03.q1k vc_7 835 1 1731 2569 C 835 94.49 911 reject_vc 1 ALIGNMENT 0 YS2-16g03.q1k vc_7 304 304 4700 4921 C 1 0.00 911 reject_low 8 ALIGNMENT 65 YS2-16g03.q1k vc_4 238 304 1548 1614 F 67 100.00 911 reject_vc 3 ALIGNMENT 65 YS2-16g03.q1k vc_4 304 238 46 112 C 67 100.00 911 reject_low 9 ALIGNMENT 65 YS2-16g03.q1k vc_4 304 238 6273 6339 C 67 100.00 911 reject_low 10 ALIGNMENT 0 YS2-16g03.q1k vc_4 459 305 47 46 C 155 0.00 911 reject_low 9 ALIGNMENT 247 YS2-16g03.q1k vc_7 303 53 4922 5172 C 251 99.60 911|0,1 reject_low 8 ALIGNMENT 0 YS2-16g03.q1k vc_2 304 459 2624 2623 F 156 0.00 911 reject_low 6 ALIGNMENT 0 YS2-16g03.q1k vc_4 459 305 6274 6273 C 155 0.00 911 reject_low 10 ALIGNMENT 0 YS2-16g03.q1k vc_7 459 422 4584 4583 C 38 0.00 911 reject_low 8 ALIGNMENT 51 YS2-16g03.q1k vc_7 54 3 6360 6411 C 52 100.00 911|1,0 reject_low 8 ALIGNMENT 302 YS2-16g03.q1k vc_2 1 303 2322 2624 F 303 100.00 911 reject_low 6 ALIGNMENT 693 YS2-16g03.q1k vc_5 1 895 2556 3457 F 895 92.85 911 reject_vc 0 ALIGNMENT 0 YS2-16g03.q1k vc_4 237 62 113 112 C 176 0.00 911 reject_low 9 ALIGNMENT 0 YS2-16g03.q1k vc_3 304 459 2991 2990 F 156 0.00 911 reject_low 7 ALIGNMENT 0 YS2-16g03.q1k vc_7 53 54 5172 6360 C 0 0.00 911 reject_low 8 ALIGNMENT 166 YS2-16g03.p1k chr15 201 27 943242 943417 C 175 98.86 214 accept 2 ALIGNMENT 380 YS2-16g03.q1k vc_4 308 895 1879 2473 F 588 88.95 911 reject_vc 3 ALIGNMENT 0 YS2-16g03.q1k vc_4 459 422 5233 5232 C 38 0.00 911 reject_low 4 ALIGNMENT 302 YS2-16g03.q1k vc_1 1 303 2689 2991 F 303 100.00 911 reject_low 5 ALIGNMENT 0 YS2-16g03.q1k vc_1 304 459 2991 2990 F 156 0.00 911 reject_low 5 ALIGNMENT 413 YS2-16g03.q1k vc_4 421 1 5232 5654 C 421 99.52 911 reject_low 4 ALIGNMENT 0 YS2-16g03.q1k vc_4 237 62 6340 6339 C 176 0.00 911 reject_low 10 ALIGNMENT 36 YS2-16g04.q1k vc_5 258 223 1 36 C 36 100.00 261 reject_low 8 ALIGNMENT 39 YS2-16g04.q1k vc_5 261 223 5025 5063 C 39 100.00 261 reject_low 6 ALIGNMENT 180 YS2-16g04.q1k chr07 220 39 1003814 1003995 C 182 100.00 261 accept_chi 1 ALIGNMENT 38 YS2-16g04.q1k vc_7 224 261 13525 13562 F 38 100.00 261 reject_low 7 ALIGNMENT 0 YS2-16g04.q1k vc_5 222 62 5064 5063 C 161 0.00 261 reject_low 6 ALIGNMENT 0 YS2-16g04.q1k vc_5 222 62 37 36 C 161 0.00 261 reject_low 8 ALIGNMENT 41 YS2-16g04.q1k vc_1 261 221 2472 2512 C 41 100.00 261 reject_low 2 ALIGNMENT 0 YS2-16g04.q1k vc_3 220 62 2513 2512 C 159 0.00 261 reject_low 4 ALIGNMENT 0 YS2-16g04.q1k vc_2 220 62 2146 2145 C 159 0.00 261 reject_low 3 ALIGNMENT 41 YS2-16g04.q1k vc_4 221 261 5831 5871 F 41 100.00 261 reject_low 5 ALIGNMENT 0 YS2-16g04.q1k vc_4 62 220 5831 5830 F 159 0.00 261 reject_low 5 ALIGNMENT 41 YS2-16g04.q1k vc_3 261 221 2472 2512 C 41 100.00 261 reject_low 4 ALIGNMENT 0 YS2-16g04.q1k chr07 261 221 1003815 1003814 C 41 0.00 261 accept_chi 1 ALIGNMENT 0 YS2-16g04.q1k vc_1 220 62 2513 2512 C 159 0.00 261 reject_low 2 ALIGNMENT 41 YS2-16g04.q1k vc_2 261 221 2105 2145 C 41 100.00 261 reject_low 3 ALIGNMENT 0 YS2-16g04.p1k chr07 216 233 1003995 1003994 F 18 0.00 233 accept_chi 0 ALIGNMENT 0 YS2-16g04.q1k vc_7 62 223 13525 13524 F 162 0.00 261 reject_low 7 ALIGNMENT 180 YS2-16g04.p1k chr07 34 215 1003814 1003995 F 182 100.00 233 accept_chi 0 ALIGNMENT 0 YS2-16g05.p1k chr07 788 62 379192 379191 C 727 0.00 1390 reject_low 6 ALIGNMENT 20 YS2-16g05.p1k chr14 810 773 604229 604266 C 38 92.11 1390 reject_low 3 ALIGNMENT 22 YS2-16g05.p1k chr13 789 817 539499 539528 F 29 96.55 1390 reject_low 2 ALIGNMENT 23 YS2-16g05.p1k chr14 814 786 70028 70056 C 29 100.00 1390 reject_low 4 ALIGNMENT 20 YS2-16g05.p1k chr01 780 812 113287 113319 F 33 93.94 1390 reject_low 5 ALIGNMENT 21 YS2-16g05.p1k chr07 814 789 379166 379191 C 26 100.00 1390 reject_low 6 ALIGNMENT 0 YS2-16g05.p1k chr14 785 62 70057 70056 C 724 0.00 1390 reject_low 4 ALIGNMENT 0 YS2-16g05.p1k chr10 62 773 150064 150063 F 712 0.00 1390 reject_low 1 ALIGNMENT 20 YS2-16g05.p1k chr07 811 787 988900 988924 C 25 100.00 1390 reject_low 7 ALIGNMENT 0 YS2-16g05.p1k chr14 772 62 604267 604266 C 711 0.00 1390 reject_low 3 ALIGNMENT 0 YS2-16g05.p1k chr07 786 62 988925 988924 C 725 0.00 1390 reject_low 7 ALIGNMENT 0 YS2-16g05.p1k chr01 62 779 113287 113286 F 718 0.00 1390 reject_low 5 ALIGNMENT 894 YS2-16g05.p1k chr11 38 1113 522553 523628 F 1076 95.35 1390 accept 0 ALIGNMENT 21 YS2-16g05.p1k chr10 774 808 150064 150098 F 35 94.29 1390 reject_low 1 ALIGNMENT 0 YS2-16g05.p1k chr13 62 788 539499 539498 F 727 0.00 1390 reject_low 2 ALIGNMENT 960 YS2-16g05.q1k chr11 1150 32 527358 528488 C 1119 95.44 1332 accept 0 ALIGNMENT 0 YS2-16g06.q1k chr12 411 372 157750 157749 C 40 0.00 411 accept 0 ALIGNMENT 40 YS2-16g06.q1k vc_4 372 411 5832 5871 F 40 100.00 411 reject_low 11 ALIGNMENT 0 YS2-16g06.q1k vc_7 62 373 63 62 F 312 0.00 411 reject_low 13 ALIGNMENT 315 YS2-16g06.q1k chr12 371 39 157749 158081 C 333 100.00 411 accept 0 ALIGNMENT 36 YS2-16g06.q1k vc_5 408 373 1 36 C 36 100.00 411 reject_low 15 ALIGNMENT 0 YS2-16g06.q1k vc_5 372 62 5064 5063 C 311 0.00 411 reject_low 12 ALIGNMENT 0 YS2-16g06.q1k vc_4 62 371 5832 5831 F 310 0.00 411 reject_low 11 ALIGNMENT 38 YS2-16g06.q1k vc_7 374 411 13525 13562 F 38 100.00 411 reject_low 14 ALIGNMENT 0 YS2-16g06.q1k vc_3 371 62 2512 2511 C 310 0.00 411 reject_low 10 ALIGNMENT 39 YS2-16g06.q1k vc_5 411 373 5025 5063 C 39 100.00 411 reject_low 12 ALIGNMENT 340 YS2-16g06.p1k vc_6 1 533 3712 4258 F 533 89.12 750 reject_vc 2 ALIGNMENT 340 YS2-16g06.p1k vc_5 533 1 4123 4669 C 533 89.12 750 reject_vc 1 ALIGNMENT 0 YS2-16g06.q1k vc_2 371 62 2145 2144 C 310 0.00 411 reject_low 9 ALIGNMENT 40 YS2-16g06.q1k vc_1 411 372 2472 2511 C 40 100.00 411 reject_low 8 ALIGNMENT 337 YS2-16g06.p1k vc_1 533 1 1203 1749 C 533 88.93 750 reject_vc 3 ALIGNMENT 331 YS2-16g06.p1k vc_7 1 533 456 1002 F 533 88.56 750 reject_vc 6 ALIGNMENT 0 YS2-16g06.q1k vc_5 372 62 37 36 C 311 0.00 411 reject_low 15 ALIGNMENT 0 YS2-16g06.q1k vc_1 371 62 2512 2511 C 310 0.00 411 reject_low 8 ALIGNMENT 40 YS2-16g06.q1k vc_3 411 372 2472 2511 C 40 100.00 411 reject_low 10 ALIGNMENT 331 YS2-16g06.p1k vc_7 1 533 13918 14464 F 533 88.56 750 reject_vc 7 ALIGNMENT 40 YS2-16g06.q1k vc_2 411 372 2105 2144 C 40 100.00 411 reject_low 9 ALIGNMENT 337 YS2-16g06.p1k vc_3 533 1 1203 1749 C 533 88.93 750 reject_vc 5 ALIGNMENT 337 YS2-16g06.p1k vc_2 533 1 1203 1749 C 533 88.93 750 reject_vc 4 ALIGNMENT 38 YS2-16g06.q1k vc_7 374 411 63 100 F 38 100.00 411 reject_low 13 ALIGNMENT 0 YS2-16g06.q1k vc_7 62 373 13525 13524 F 312 0.00 411 reject_low 14 ALIGNMENT 0 YS2-16g07.q1k vc_4 237 62 6340 6339 C 176 0.00 750 reject_low 14 ALIGNMENT 263 YS2-16g07.p1k vc_7 1 427 456 878 F 427 88.99 582 reject_low 1 ALIGNMENT 264 YS2-16g07.p1k vc_6 1 379 3712 4088 F 379 91.56 582 reject_low 6 ALIGNMENT 54 YS2-16g07.q1k vc_4 238 297 1548 1608 F 60 98.33 750 reject_low 11 ALIGNMENT 292 YS2-16g07.q1k vc_3 1 297 2689 2986 F 297 99.66 750 reject_low 10 ALIGNMENT 374 YS2-16g07.q1k vc_4 418 1 5232 5654 C 418 96.89 750 reject_low 7 ALIGNMENT 185 YS2-16g07.q1k vc_4 307 653 1879 2230 F 347 86.46 750 reject_low 11 ALIGNMENT 90 YS2-16g07.q1k vc_7 418 304 4583 4699 C 115 93.91 750 reject_low 12 ALIGNMENT 270 YS2-16g07.p1k vc_1 427 1 1327 1749 C 427 89.46 582 reject_low 2 ALIGNMENT 0 YS2-16g07.q1k vc_4 298 306 1609 1878 F 9 0.00 750 reject_low 11 ALIGNMENT 480 YS2-16g07.q1k vc_7 653 1 1911 2569 C 653 92.19 750 reject_low 1 ALIGNMENT 292 YS2-16g07.q1k vc_1 1 297 2689 2986 F 297 99.66 750 reject_low 8 ALIGNMENT 481 YS2-16g07.q1k vc_5 1 677 2556 3240 F 677 91.43 750 reject_vc 0 ALIGNMENT 54 YS2-16g07.q1k vc_4 297 238 52 112 C 60 98.33 750 reject_low 13 ALIGNMENT 270 YS2-16g07.p1k vc_5 427 1 4247 4669 C 427 89.46 582 reject_vc 0 ALIGNMENT 270 YS2-16g07.p1k vc_3 427 1 1327 1749 C 427 89.46 582 reject_low 4 ALIGNMENT 54 YS2-16g07.q1k vc_4 297 238 6279 6339 C 60 98.33 750 reject_low 14 ALIGNMENT 51 YS2-16g07.q1k vc_7 54 3 6360 6411 C 52 100.00 750|1,0 reject_low 12 ALIGNMENT 0 YS2-16g07.q1k vc_4 237 62 113 112 C 176 0.00 750 reject_low 13 ALIGNMENT 0 YS2-16g07.q1k vc_4 62 237 1548 1547 F 176 0.00 750 reject_low 11 ALIGNMENT 292 YS2-16g07.q1k vc_2 1 297 2322 2619 F 297 99.66 750 reject_low 9 ALIGNMENT 0 YS2-16g07.q1k vc_7 303 298 4700 4926 C 6 0.00 750 reject_low 12 ALIGNMENT 270 YS2-16g07.p1k vc_2 427 1 1327 1749 C 427 89.46 582 reject_low 3 ALIGNMENT 263 YS2-16g07.p1k vc_7 1 427 13918 14340 F 427 88.99 582 reject_low 5 ALIGNMENT 237 YS2-16g07.q1k vc_7 297 53 4927 5172 C 245 99.18 750|0,1 reject_low 12 ALIGNMENT 0 YS2-16g07.q1k vc_7 53 54 5172 6360 C 0 0.00 750 reject_low 12 ALIGNMENT 853 YS2-16g09.q1k chr05 35 1080 142210 143255 F 1046 95.98 1425 accept 0 ALIGNMENT 0 YS2-16g09.q1k chr07 753 62 431464 431463 C 692 0.00 1425 reject_low 3 ALIGNMENT 0 YS2-16g09.q1k chr09 62 746 105769 105768 F 685 0.00 1425 reject_low 1 ALIGNMENT 25 YS2-16g09.q1k chr09 747 803 105769 105825 F 57 94.74 1425 reject_low 1 ALIGNMENT 959 YS2-16g09.p1k chr05 1159 32 146575 147709 C 1128 96.63 1412 accept 0 ALIGNMENT 21 YS2-16g09.q1k chr07 809 754 431408 431463 C 56 92.86 1425 reject_low 3 ALIGNMENT 0 YS2-16g09.q1k chr07 62 757 467704 467703 F 696 0.00 1425 reject_low 2 ALIGNMENT 23 YS2-16g09.q1k chr07 758 805 467704 467751 F 48 95.83 1425 reject_low 2 ALIGNMENT 0 YS2-16g10.q1k chr12 796 251 482045 482044 C 546 0.00 1377 reject_low 5 ALIGNMENT 0 YS2-16g10.q1k chr12 131 62 468931 468930 C 70 0.00 1377 reject_low 1 ALIGNMENT 1037 YS2-16g10.p1k chr12 38 1215 455360 456535 F 1178 96.86 1487 accept 0 ALIGNMENT 0 YS2-16g10.q1k chr06 62 509 31622 31621 F 448 0.00 1377 reject_low 3 ALIGNMENT 0 YS2-16g10.q1k chr12 796 251 472465 472464 C 546 0.00 1377 reject_low 4 ALIGNMENT 0 YS2-16g10.q1k chr12 116 62 489482 489481 C 55 0.00 1377 reject_low 2 ALIGNMENT 0 YS2-16g10.q1k chr12 796 251 489349 489348 C 546 0.00 1377 reject_low 2 ALIGNMENT 128 YS2-16g10.q1k chr12 250 117 489348 489481 C 134 98.51 1377 reject_low 2 ALIGNMENT 0 YS2-16g10.q1k chr12 796 251 485697 485696 C 546 0.00 1377 reject_low 6 ALIGNMENT 119 YS2-16g10.q1k chr12 250 132 482044 482162 C 119 100.00 1377 reject_low 5 ALIGNMENT 1037 YS2-16g10.p1k chr12 38 1215 464497 465672 F 1178 96.86 1487 reject_low 1 ALIGNMENT 94 YS2-16g10.q1k chr06 510 617 31622 31729 F 108 98.15 1377 reject_low 3 ALIGNMENT 913 YS2-16g10.q1k chr12 1183 37 458730 459897 C 1147 94.86 1377 accept 0 ALIGNMENT 119 YS2-16g10.q1k chr12 250 132 472464 472582 C 119 100.00 1377 reject_low 4 ALIGNMENT 0 YS2-16g10.q1k chr06 618 796 31729 31728 F 179 0.00 1377 reject_low 3 ALIGNMENT 0 YS2-16g10.q1k chr12 131 62 482163 482162 C 70 0.00 1377 reject_low 5 ALIGNMENT 0 YS2-16g10.q1k chr12 131 62 472583 472582 C 70 0.00 1377 reject_low 4 ALIGNMENT 860 YS2-16g10.q1k chr12 1183 132 467867 468930 C 1052 95.44 1377 reject_low 1 ALIGNMENT 119 YS2-16g10.q1k chr12 250 132 485696 485814 C 119 100.00 1377 reject_low 6 ALIGNMENT 0 YS2-16g10.q1k chr12 131 62 485815 485814 C 70 0.00 1377 reject_low 6 ALIGNMENT 286 YS2-16g11.p1k chr07 102 433 401962 402293 F 332 97.29 1289 reject_low 11 ALIGNMENT 0 YS2-16g11.p1k chr14 100 62 102525 102524 C 39 0.00 1289 reject_low 2 ALIGNMENT 0 YS2-16g11.p1k chr15 350 945 594759 594758 F 596 0.00 1289 reject_low 22 ALIGNMENT 270 YS2-16g11.p1k chr16 434 102 856212 856550 C 333 95.80 1289 reject_low 19 ALIGNMENT 0 YS2-16g11.p1k chr07 62 298 817278 817277 F 237 0.00 1289 reject_low 23 ALIGNMENT 307 YS2-16g11.p1k chr14 433 102 96610 96941 C 332 99.40 1289 reject_low 4 ALIGNMENT 0 YS2-16g11.p1k chr13 62 101 189752 189751 F 40 0.00 1289 reject_low 13 ALIGNMENT 0 YS2-16g11.p1k chr02 435 945 221374 221373 F 511 0.00 1289 reject_low 9 ALIGNMENT 0 YS2-16g11.p1k chr16 62 96 560473 560472 F 35 0.00 1289 reject_low 1 ALIGNMENT 311 YS2-16g11.p1k chr16 97 433 560473 560809 F 337 99.41 1289 reject_low 1 ALIGNMENT 286 YS2-16g11.p1k chr02 102 434 221040 221374 F 333 97.30 1289 reject_low 9 ALIGNMENT 0 YS2-16g11.p1k chr07 434 945 535546 535545 F 512 0.00 1289 reject_low 8 ALIGNMENT 0 YS2-16g11.p1k chr01 100 62 166165 166164 C 39 0.00 1289 reject_low 20 ALIGNMENT 0 YS2-16g11.p1k chr11 96 62 458120 458119 C 35 0.00 1289 reject_low 5 ALIGNMENT 0 YS2-16g11.p1k chr07 434 945 402293 402292 F 512 0.00 1289 reject_low 11 ALIGNMENT 0 YS2-16g11.p1k chr07 62 101 401962 401961 F 40 0.00 1289 reject_low 11 ALIGNMENT 29 YS2-16g11.p1k chr14 102 131 102549 102578 F 30 100.00 1289 reject_low 24 ALIGNMENT 335 YS2-16g11.q1k chr08 420 44 94964 95340 C 377 97.61 1355 reject_bad_break 0 ALIGNMENT 0 YS2-16g11.p1k chr10 434 945 483886 483885 F 512 0.00 1289 reject_low 18 ALIGNMENT 0 YS2-16g11.p1k chr10 62 100 472376 472375 F 39 0.00 1289 reject_low 14 ALIGNMENT 0 YS2-16g11.p1k chr16 101 62 856551 856550 C 40 0.00 1289 reject_low 19 ALIGNMENT 0 YS2-16g11.p1k chr13 414 945 190063 190062 F 532 0.00 1289 reject_low 13 ALIGNMENT 0 YS2-16g11.p1k chr01 945 435 165827 165826 C 511 0.00 1289 reject_low 20 ALIGNMENT 283 YS2-16g11.p1k chr15 102 413 600403 600714 F 312 99.04 1289 reject_low 16 ALIGNMENT 0 YS2-16g11.p1k chr08 73 433 92300 92291 F 361 0.00 1289 reject_bad_break 0 ALIGNMENT 287 YS2-16g11.p1k chr11 433 97 457783 458119 C 337 97.03 1289 reject_low 5 ALIGNMENT 284 YS2-16g11.p1k chr15 98 413 594817 595132 F 316 98.73 1289 reject_low 10 ALIGNMENT 0 YS2-16g11.p1k chr15 414 945 595132 595131 F 532 0.00 1289 reject_low 10 ALIGNMENT 0 YS2-16g11.p1k chr08 945 414 543631 543630 C 532 0.00 1289 reject_low 12 ALIGNMENT 274 YS2-16g11.p1k chr10 101 434 472376 472715 F 334 96.11 1289 reject_low 14 ALIGNMENT 301 YS2-16g11.p1k chr11 433 99 517095 517429 C 335 98.51 1289 reject_low 3 ALIGNMENT 309 YS2-16g11.p1k chr14 434 101 102191 102524 C 334 99.40 1289 reject_low 2 ALIGNMENT 0 YS2-16g11.p1k chr07 62 101 535215 535214 F 40 0.00 1289 reject_low 8 ALIGNMENT 207 YS2-16g11.p1k chr01 433 102 160239 160575 C 332 89.76 1289 reject_low 21 ALIGNMENT 24 YS2-16g11.p1k chr08 37 72 92264 92299 F 36 94.44 1289 reject_bad_break 0 ALIGNMENT 0 YS2-16g11.p1k chr07 411 945 817387 817386 F 535 0.00 1289 reject_low 23 ALIGNMENT 63 YS2-16g11.p1k chr07 299 410 817278 817387 F 112 88.39 1289 reject_low 23 ALIGNMENT 283 YS2-16g11.p1k chr07 413 102 817418 817729 C 312 99.04 1289 reject_low 15 ALIGNMENT 286 YS2-16g11.p1k chr08 413 102 543630 543941 C 312 99.36 1289 reject_low 12 ALIGNMENT 0 YS2-16g11.p1k chr14 101 62 96942 96941 C 40 0.00 1289 reject_low 4 ALIGNMENT 272 YS2-16g11.p1k chr10 102 433 483549 483886 F 332 96.08 1289 reject_low 18 ALIGNMENT 0 YS2-16g11.p1k chr11 945 434 457784 457783 C 512 0.00 1289 reject_low 5 ALIGNMENT 0 YS2-16g11.p1k chr10 435 945 472715 472714 F 511 0.00 1289 reject_low 14 ALIGNMENT 0 YS2-16g11.p1k chr14 945 434 96611 96610 C 512 0.00 1289 reject_low 4 ALIGNMENT 286 YS2-16g11.p1k chr13 102 413 189752 190063 F 312 99.36 1289 reject_low 13 ALIGNMENT 0 YS2-16g11.p1k chr15 414 945 600714 600713 F 532 0.00 1289 reject_low 16 ALIGNMENT 0 YS2-16g11.p1k chr14 945 435 102192 102191 C 511 0.00 1289 reject_low 2 ALIGNMENT 0 YS2-16g11.p1k chr13 62 96 184165 184164 F 35 0.00 1289 reject_low 7 ALIGNMENT 0 YS2-16g11.p1k chr07 435 945 932023 932022 F 511 0.00 1289 reject_low 6 ALIGNMENT 0 YS2-16g11.p1k chr11 945 434 517096 517095 C 512 0.00 1289 reject_low 3 ALIGNMENT 0 YS2-16g11.p1k chr02 62 101 221040 221039 F 40 0.00 1289 reject_low 9 ALIGNMENT 0 YS2-16g11.p1k chr15 62 219 594630 594629 F 158 0.00 1289 reject_low 22 ALIGNMENT 209 YS2-16g11.p1k chr01 434 101 165826 166164 C 334 89.82 1289 reject_low 20 ALIGNMENT 82 YS2-16g11.p1k chr15 220 349 594630 594759 F 130 90.00 1289 reject_low 22 ALIGNMENT 280 YS2-16g11.p1k chr02 102 413 259576 259887 F 312 98.72 1289 reject_low 17 ALIGNMENT 0 YS2-16g11.p1k chr16 945 435 856213 856212 C 511 0.00 1289 reject_low 19 ALIGNMENT 0 YS2-16g11.p1k chr01 101 62 160576 160575 C 40 0.00 1289 reject_low 21 ALIGNMENT 0 YS2-16g11.p1k chr14 62 101 102549 102548 F 40 0.00 1289 reject_low 24 ALIGNMENT 0 YS2-16g11.p1k chr08 101 62 543942 543941 C 40 0.00 1289 reject_low 12 ALIGNMENT 541 YS2-16g11.p1k chr08 434 1128 92292 92998 F 695 94.24 1289 reject_bad_break 0 ALIGNMENT 0 YS2-16g11.p1k chr15 62 101 600403 600402 F 40 0.00 1289 reject_low 16 ALIGNMENT 0 YS2-16g11.p1k chr11 98 62 517430 517429 C 37 0.00 1289 reject_low 3 ALIGNMENT 0 YS2-16g11.q1k chr08 919 421 94965 94964 C 499 0.00 1355 reject_bad_break 0 ALIGNMENT 0 YS2-16g11.p1k chr16 434 945 560809 560808 F 512 0.00 1289 reject_low 1 ALIGNMENT 0 YS2-16g11.p1k chr13 414 945 184481 184480 F 532 0.00 1289 reject_low 7 ALIGNMENT 0 YS2-16g11.p1k chr07 62 101 931691 931690 F 40 0.00 1289 reject_low 6 ALIGNMENT 0 YS2-16g11.p1k chr10 62 101 483549 483548 F 40 0.00 1289 reject_low 18 ALIGNMENT 0 YS2-16g11.p1k chr15 62 97 594817 594816 F 36 0.00 1289 reject_low 10 ALIGNMENT 0 YS2-16g11.p1k chr01 945 434 160240 160239 C 512 0.00 1289 reject_low 21 ALIGNMENT 296 YS2-16g11.p1k chr07 102 434 931691 932023 F 333 98.20 1289 reject_low 6 ALIGNMENT 0 YS2-16g11.p1k chr02 62 101 259576 259575 F 40 0.00 1289 reject_low 17 ALIGNMENT 288 YS2-16g11.p1k chr13 97 413 184165 184481 F 317 99.05 1289 reject_low 7 ALIGNMENT 295 YS2-16g11.p1k chr07 102 433 535215 535546 F 332 98.19 1289 reject_low 8 ALIGNMENT 0 YS2-16g11.p1k chr07 101 62 817730 817729 C 40 0.00 1289 reject_low 15 ALIGNMENT 0 YS2-16g11.p1k chr14 132 945 102578 102577 F 814 0.00 1289 reject_low 24 ALIGNMENT 0 YS2-16g11.p1k chr07 945 414 817419 817418 C 532 0.00 1289 reject_low 15 ALIGNMENT 0 YS2-16g11.p1k chr02 414 945 259887 259886 F 532 0.00 1289 reject_low 17 ALIGNMENT 904 YS2-16g12.p1k chr14 38 1036 43299 44311 F 999 97.80 1266 accept 0 ALIGNMENT 957 YS2-16g12.q1k chr14 1166 43 48239 49386 C 1124 96.17 1320 accept 0 ALIGNMENT 41 YS2-16g13.q1k vc_3 710 670 2472 2512 C 41 100.00 710 reject_low 3 ALIGNMENT 0 YS2-16g13.q1k vc_5 671 62 5064 5063 C 610 0.00 710 reject_low 5 ALIGNMENT 0 YS2-16g13.q1k vc_3 669 62 2513 2512 C 608 0.00 710 reject_low 3 ALIGNMENT 39 YS2-16g13.q1k vc_5 710 672 5025 5063 C 39 100.00 710 reject_low 5 ALIGNMENT 38 YS2-16g13.q1k vc_7 673 710 13525 13562 F 38 100.00 710 reject_low 6 ALIGNMENT 0 YS2-16g13.q1k vc_1 669 62 2513 2512 C 608 0.00 710 reject_low 2 ALIGNMENT 0 YS2-16g13.q1k chr10 670 710 642590 642589 F 41 0.00 710 accept_chi 1 ALIGNMENT 613 YS2-16g13.p1k chr10 667 34 641957 642590 C 634 99.53 686 accept_chi 0 ALIGNMENT 0 YS2-16g13.q1k vc_5 671 62 37 36 C 610 0.00 710 reject_low 7 ALIGNMENT 0 YS2-16g13.q1k vc_4 62 669 5831 5830 F 608 0.00 710 reject_low 4 ALIGNMENT 0 YS2-16g13.q1k vc_7 62 672 13525 13524 F 611 0.00 710 reject_low 6 ALIGNMENT 41 YS2-16g13.q1k vc_1 710 670 2472 2512 C 41 100.00 710 reject_low 2 ALIGNMENT 606 YS2-16g13.q1k chr10 43 669 641963 642590 F 627 99.52 710 accept_chi 1 ALIGNMENT 0 YS2-16g13.p1k chr10 686 668 641958 641957 C 19 0.00 686 accept_chi 0 ALIGNMENT 36 YS2-16g13.q1k vc_5 707 672 1 36 C 36 100.00 710 reject_low 7 ALIGNMENT 41 YS2-16g13.q1k vc_4 670 710 5831 5871 F 41 100.00 710 reject_low 4 ALIGNMENT 533 YS2-16g15.p1k chr10 715 51 227433 228111 C 665 95.04 1219 accept 0 ALIGNMENT 980 YS2-16g15.q1k chr10 30 1162 222433 223576 F 1133 96.12 1343 accept 0 ALIGNMENT 921 YS2-16g17.p1k chr15 1105 38 535230 536295 C 1068 96.72 1292 accept_chi 1 ALIGNMENT 1037 YS2-16g17.q1k chr11 1301 38 329775 331044 C 1264 95.33 1368 accept_chi 0 ALIGNMENT 0 YS2-16g18.q1k vc_7 986 62 6412 6411 C 925 0.00 1325 reject_low 14 ALIGNMENT 38 YS2-16g18.q1k vc_7 1036 987 6360 6411 C 50 94.00 1325|1,0 reject_low 14 ALIGNMENT 39 YS2-16g18.q1k vc_5 827 789 5025 5063 C 39 100.00 1325 reject_low 15 ALIGNMENT 248 YS2-16g18.q1k vc_2 827 1192 2164 2542 F 366 90.71 1325 reject_low 3 ALIGNMENT 0 YS2-16g18.q1k vc_1 786 62 2513 2512 C 725 0.00 1325 reject_low 11 ALIGNMENT 0 YS2-16g18.q1k vc_7 62 789 13525 13524 F 728 0.00 1325 reject_low 17 ALIGNMENT 0 YS2-16g18.q1k chr02 787 835 61720 61719 F 49 0.00 1325 accept_chi 0 ALIGNMENT 0 YS2-16g18.q1k vc_4 828 827 5872 6353 F 0 0.00 1325 reject_low 9 ALIGNMENT 0 YS2-16g18.q1k vc_7 1035 1036 5172 6360 C 0 0.00 1325 reject_low 14 ALIGNMENT 0 YS2-16g18.q1k vc_1 62 826 2531 2530 F 765 0.00 1325 reject_low 2 ALIGNMENT 38 YS2-16g18.q1k vc_7 790 827 63 100 F 38 100.00 1325 reject_low 16 ALIGNMENT 0 YS2-16g18.q1k vc_4 826 62 1535 1534 C 765 0.00 1325 reject_low 10 ALIGNMENT 41 YS2-16g18.q1k vc_1 827 787 2472 2512 C 41 100.00 1325 reject_low 11 ALIGNMENT 678 YS2-16g18.q1k chr02 35 786 60973 61720 F 752 97.87 1325 accept_chi 0 ALIGNMENT 677 YS2-16g18.p1k chr02 784 35 60973 61720 C 750 97.87 785 accept_chi 1 ALIGNMENT 0 YS2-16g18.q1k vc_3 62 826 2531 2530 F 765 0.00 1325 reject_low 4 ALIGNMENT 41 YS2-16g18.q1k vc_3 827 787 2472 2512 C 41 100.00 1325 reject_low 13 ALIGNMENT 248 YS2-16g18.q1k vc_3 827 1192 2531 2909 F 366 90.71 1325 reject_low 4 ALIGNMENT 0 YS2-16g18.q1k vc_7 826 62 2728 2727 C 765 0.00 1325 reject_low 6 ALIGNMENT 57 YS2-16g18.q1k vc_7 1192 1035 5004 5172 C 158 81.01 1325|0,1 reject_low 14 ALIGNMENT 241 YS2-16g18.q1k vc_4 1192 827 5432 5812 C 366 90.16 1325 reject_low 7 ALIGNMENT 41 YS2-16g18.q1k vc_2 827 787 2105 2145 C 41 100.00 1325 reject_low 12 ALIGNMENT 84 YS2-16g18.q1k vc_4 915 827 1446 1534 C 89 98.88 1325 reject_low 10 ALIGNMENT 153 YS2-16g18.q1k vc_4 827 988 126 287 F 162 98.77 1325 reject_low 8 ALIGNMENT 0 YS2-16g18.q1k vc_2 62 826 2164 2163 F 765 0.00 1325 reject_low 3 ALIGNMENT 41 YS2-16g18.q1k vc_4 787 827 5831 5871 F 41 100.00 1325 reject_low 9 ALIGNMENT 248 YS2-16g18.q1k vc_7 1192 827 2349 2727 C 366 90.71 1325 reject_low 6 ALIGNMENT 153 YS2-16g18.q1k vc_4 827 988 6353 6514 F 162 98.77 1325|1,0 reject_low 9 ALIGNMENT 0 YS2-16g18.q1k vc_5 788 62 37 36 C 727 0.00 1325 reject_low 18 ALIGNMENT 248 YS2-16g18.q1k vc_5 827 1192 2398 2776 F 366 90.71 1325 reject_low 5 ALIGNMENT 0 YS2-16g18.q1k vc_5 62 826 2398 2397 F 765 0.00 1325 reject_low 5 ALIGNMENT 0 YS2-16g18.q1k vc_7 62 789 63 62 F 728 0.00 1325 reject_low 16 ALIGNMENT 38 YS2-16g18.q1k vc_7 790 827 13525 13562 F 38 100.00 1325 reject_low 17 ALIGNMENT 0 YS2-16g18.q1k vc_4 62 786 5831 5830 F 725 0.00 1325 reject_low 9 ALIGNMENT 248 YS2-16g18.q1k vc_1 827 1192 2531 2909 F 366 90.71 1325 reject_low 2 ALIGNMENT 0 YS2-16g18.q1k vc_2 786 62 2146 2145 C 725 0.00 1325 reject_low 12 ALIGNMENT 0 YS2-16g18.q1k vc_3 786 62 2513 2512 C 725 0.00 1325 reject_low 13 ALIGNMENT 0 YS2-16g18.q1k vc_5 788 62 5064 5063 C 727 0.00 1325 reject_low 15 ALIGNMENT 36 YS2-16g18.q1k vc_5 824 789 1 36 C 36 100.00 1325 reject_low 18 ALIGNMENT 0 YS2-16g18.q1k vc_4 62 826 126 125 F 765 0.00 1325 reject_low 8 ALIGNMENT 0 YS2-16g18.q1k vc_4 826 62 5813 5812 C 765 0.00 1325 reject_low 7 ALIGNMENT 0 YS2-16g20.q1k chr08 151 62 291479 291478 C 90 0.00 1341 manual 2 ALIGNMENT 210 YS2-16g20.p1k chr10 994 48 735973 736920 C 947 74.02 1257 ambiguous_tel 0 ALIGNMENT 34 YS2-16g20.q1k chr08 492 152 291139 291478 C 341 70.97 1341 manual 2 ALIGNMENT 0 YS2-16g20.q1k chr04 222 62 1160092 1160091 C 161 0.00 1341 manual 3 ALIGNMENT 0 YS2-16g20.q1k chr08 886 493 291140 291139 C 394 0.00 1341 manual 2 ALIGNMENT 36 YS2-16g20.q1k chr04 492 223 1159823 1160091 C 270 71.85 1341 manual 3 ALIGNMENT 0 YS2-16g20.q1k chr04 886 493 1159824 1159823 C 394 0.00 1341 manual 3 ALIGNMENT 207 YS2-16g20.p1k chr04 48 994 8795 9742 F 947 73.92 1257 ambiguous_tel 1 ALIGNMENT 1037 YS2-16g21.p1k chr12 33 1236 556915 558108 F 1204 96.59 1243 accept 0 ALIGNMENT 1016 YS2-16g21.q1k chr12 1285 39 561201 562445 C 1247 94.55 1316 accept 0 ALIGNMENT 1013 YS2-16g22.q1k chr16 36 1187 866022 867177 F 1152 96.79 1298 accept 0 ALIGNMENT 1015 YS2-16g22.p1k chr16 1212 42 870249 871424 C 1171 96.67 1214 accept 0 ALIGNMENT 1060 YS2-16h01.q1k chr07 1311 38 940305 941579 C 1274 95.53 1320 accept 0 ALIGNMENT 904 YS2-16h01.p1k chr07 35 1270 939601 940822 F 1236 93.28 1337 accept 0 ALIGNMENT 1020 YS2-16h03.p1k chr08 1212 43 490895 492079 C 1170 97.01 1283 accept 0 ALIGNMENT 945 YS2-16h03.q1k chr08 49 1143 490374 491484 F 1095 96.26 1294 accept 0 ALIGNMENT 992 YS2-16h04.q1k chr12 1235 50 65064 66246 C 1186 94.94 1353 accept 0 ALIGNMENT 951 YS2-16h04.p1k chr12 43 1150 59937 61054 F 1108 97.20 1267 accept 0 ALIGNMENT 972 YS2-16h05.p1k chr02 33 1170 585886 587037 F 1138 96.66 1404 accept 0 ALIGNMENT 892 YS2-16h05.q1k chr02 1075 41 589311 590360 C 1035 96.71 1295 accept 0 ALIGNMENT 0 YS2-16h06.q1k vc_1 273 62 2513 2512 C 212 0.00 314 reject_low 2 ALIGNMENT 38 YS2-16h06.q1k vc_7 277 314 13525 13562 F 38 100.00 314 reject_low 7 ALIGNMENT 38 YS2-16h06.q1k vc_7 277 314 63 100 F 38 100.00 314 reject_low 6 ALIGNMENT 0 YS2-16h06.p1k chr05 272 288 67176 67175 F 17 0.00 288 accept_chi 0 ALIGNMENT 41 YS2-16h06.q1k vc_2 314 274 2105 2145 C 41 100.00 314 reject_low 3 ALIGNMENT 41 YS2-16h06.q1k vc_4 274 314 5831 5871 F 41 100.00 314 reject_low 5 ALIGNMENT 0 YS2-16h06.q1k vc_7 62 276 63 62 F 215 0.00 314 reject_low 6 ALIGNMENT 0 YS2-16h06.q1k vc_3 273 62 2513 2512 C 212 0.00 314 reject_low 4 ALIGNMENT 0 YS2-16h06.q1k vc_4 62 273 5831 5830 F 212 0.00 314 reject_low 5 ALIGNMENT 41 YS2-16h06.q1k vc_1 314 274 2472 2512 C 41 100.00 314 reject_low 2 ALIGNMENT 0 YS2-16h06.q1k vc_7 62 276 13525 13524 F 215 0.00 314 reject_low 7 ALIGNMENT 215 YS2-16h06.p1k chr05 36 271 66941 67176 F 236 99.15 288 accept_chi 0 ALIGNMENT 41 YS2-16h06.q1k vc_3 314 274 2472 2512 C 41 100.00 314 reject_low 4 ALIGNMENT 211 YS2-16h06.q1k chr05 273 37 66941 67176 C 237 98.73 314 accept_chi 1 ALIGNMENT 0 YS2-16h06.q1k chr05 314 274 66942 66941 C 41 0.00 314 accept_chi 1 ALIGNMENT 0 YS2-16h06.q1k vc_2 273 62 2146 2145 C 212 0.00 314 reject_low 3 ALIGNMENT 0 YS2-16h07.p1k chr04 891 518 1138180 1138179 C 374 0.00 1330 reject_low 1 ALIGNMENT 471 YS2-16h07.p1k chr04 517 34 1138179 1138663 C 484 99.79 1330 reject_low 1 ALIGNMENT 0 YS2-16h07.p1k chr08 514 62 15244 15243 C 453 0.00 1330 accept 0 ALIGNMENT 954 YS2-16h07.q1k chr08 39 1210 13689 14869 F 1172 94.88 1339 accept 0 ALIGNMENT 484 YS2-16h07.p1k chr08 1181 515 14567 15243 C 667 92.05 1330 accept 0 ALIGNMENT 40 YS2-16h08.q1k vc_1 631 592 2472 2511 C 40 100.00 631 reject_low 2 ALIGNMENT 0 YS2-16h08.q1k vc_3 591 62 2512 2511 C 530 0.00 631 reject_low 3 ALIGNMENT 0 YS2-16h08.q1k vc_5 592 62 5064 5063 C 531 0.00 631 reject_low 5 ALIGNMENT 0 YS2-16h08.p1k chr14 610 592 124971 124970 C 19 0.00 610 accept_chi 1 ALIGNMENT 40 YS2-16h08.q1k vc_4 592 631 5832 5871 F 40 100.00 631 reject_low 4 ALIGNMENT 0 YS2-16h08.q1k chr14 592 631 125531 125530 F 40 0.00 631 accept_chi 0 ALIGNMENT 39 YS2-16h08.q1k vc_5 631 593 5025 5063 C 39 100.00 631 reject_low 5 ALIGNMENT 40 YS2-16h08.q1k vc_3 631 592 2472 2511 C 40 100.00 631 reject_low 3 ALIGNMENT 38 YS2-16h08.q1k vc_7 594 631 13525 13562 F 38 100.00 631 reject_low 6 ALIGNMENT 0 YS2-16h08.q1k vc_7 62 593 13525 13524 F 532 0.00 631 reject_low 6 ALIGNMENT 536 YS2-16h08.p1k chr14 591 31 124970 125531 C 561 99.64 610 accept_chi 1 ALIGNMENT 0 YS2-16h08.q1k vc_1 591 62 2512 2511 C 530 0.00 631 reject_low 2 ALIGNMENT 0 YS2-16h08.q1k vc_4 62 591 5832 5831 F 530 0.00 631 reject_low 4 ALIGNMENT 537 YS2-16h08.q1k chr14 34 591 124974 125531 F 558 99.82 631 accept_chi 0 ALIGNMENT 0 YS2-16h08.q1k vc_5 592 62 37 36 C 531 0.00 631 reject_low 7 ALIGNMENT 36 YS2-16h08.q1k vc_5 628 593 1 36 C 36 100.00 631 reject_low 7 ALIGNMENT 22 YS2-16h09.q1k chr09 954 930 4603 4627 C 25 96.00 1385 reject_low 15 ALIGNMENT 0 YS2-16h09.q1k chr14 955 955 4190 4214 C 1 0.00 1385 reject_low 16 ALIGNMENT 0 YS2-16h09.q1k chr05 955 955 572677 572701 F 1 0.00 1385 reject_low 12,26 ALIGNMENT 0 YS2-16h09.q1k chr14 1031 1032 3614 4079 C 0 0.00 1385 reject_low 16 ALIGNMENT 38 YS2-16h09.q1k chr05 1031 979 4163 4218 C 53 92.45 1385|0,5 reject_low 18 ALIGNMENT 0 YS2-16h09.q1k chr07 955 955 1086754 1086778 F 1 0.00 1385 reject_low 11,27 ALIGNMENT 0 YS2-16h09.p1k chr15 1107 1108 1087066 1087096 C 0 0.00 1459 reject_low 23 ALIGNMENT 775 YS2-16h09.q1k chr10 855 39 5333 6149 C 817 98.78 1385 reject_low 17 ALIGNMENT 0 YS2-16h09.q1k chr16 929 914 4149 4210 C 16 0.00 1385 reject_low 14 ALIGNMENT 0 YS2-16h09.q1k chr12 984 983 1074102 1074132 F 0 0.00 1385 reject_low 9 ALIGNMENT 980 YS2-16h09.p1k chr04 1060 37 1528444 1529469 C 1024 98.83 1459 reject_low 8 ALIGNMENT 1079 YS2-16h09.p1k chr16 1254 37 944139 945367 C 1218 96.72 1459 ambiguous_tel 3 ALIGNMENT 696 YS2-16h09.q1k chr05 39 855 571131 571930 F 817 96.33 1385 reject_low 12 ALIGNMENT 0 YS2-16h09.p1k chr12 1107 1108 1067439 1067469 C 0 0.00 1459 reject_low 20 ALIGNMENT 968 YS2-16h09.p1k chr09 37 1060 2981 4006 F 1024 98.44 1459 reject_low 15 ALIGNMENT 0 YS2-16h09.p1k chr09 62 1059 4471 4470 F 998 0.00 1459 reject_low 21 ALIGNMENT 43 YS2-16h09.p1k chr07 1112 1057 1086833 1086888 C 56 91.07 1459|5,0 reject_low 22 ALIGNMENT 0 YS2-16h09.q1k chr05 62 856 572533 572532 F 795 0.00 1385 reject_low 26 ALIGNMENT 35 YS2-16h09.q1k chr05 979 1031 572756 572811 F 53 90.57 1385|5,0 reject_low 12,26 ALIGNMENT 38 YS2-16h09.q1k chr12 979 1031 1067465 1067520 F 53 92.45 1385|5,0 reject_low 13,25,28 ALIGNMENT 0 YS2-16h09.q1k chr15 856 856 1086267 1086868 F 1 0.00 1385 reject_low 10 ALIGNMENT 25 YS2-16h09.p1k chr12 1135 1103 1074074 1074106 C 33 90.91 1459|0,5 reject_low 28 ALIGNMENT 0 YS2-16h09.q1k chr04 914 929 1527761 1527822 F 16 0.00 1385 reject_low 8 ALIGNMENT 0 YS2-16h09.p1k chr12 1056 62 1067521 1067520 C 995 0.00 1459 reject_low 20 ALIGNMENT 0 YS2-16h09.q1k chr10 955 955 4561 4585 C 1 0.00 1385 reject_low 17 ALIGNMENT 90 YS2-16h09.q1k chr05 1031 1225 573277 573486 F 195 84.62 1385|1,0 reject_low 26 ALIGNMENT 0 YS2-16h09.q1k chr16 856 856 4268 4869 C 1 0.00 1385 reject_low 14 ALIGNMENT 784 YS2-16h09.q1k chr12 39 855 1072486 1073302 F 817 99.14 1385 reject_low 9 ALIGNMENT 0 YS2-16h09.q1k chr10 983 984 4502 4532 C 0 0.00 1385 reject_low 17 ALIGNMENT 35 YS2-16h09.q1k chr14 1031 979 4080 4135 C 53 90.57 1385|0,5 reject_low 16 ALIGNMENT 0 YS2-16h09.q1k chr12 1032 1031 1067521 1074649 F 0 0.00 1385 reject_low 25 ALIGNMENT 25 YS2-16h09.p1k chr12 1135 1103 1067411 1067443 C 33 90.91 1459|0,5 reject_low 20 ALIGNMENT 1082 YS2-16h09.p1k chr12 37 1254 2810 4038 F 1218 96.72 1459 ambiguous_tel 0 ALIGNMENT 0 YS2-16h09.q1k chr05 955 955 4273 4297 C 1 0.00 1385 reject_low 18 ALIGNMENT 0 YS2-16h09.q1k chr09 856 856 4747 5349 C 1 0.00 1385 reject_low 15 ALIGNMENT 53 YS2-16h09.q1k chr07 857 913 1086610 1086666 F 57 98.25 1385 reject_low 11,27 ALIGNMENT 0 YS2-16h09.p1k chr09 1108 1107 4519 4549 F 0 0.00 1459 reject_low 21 ALIGNMENT 0 YS2-16h09.q1k chr05 1032 1031 572812 573277 F 0 0.00 1385 reject_low 26 ALIGNMENT 25 YS2-16h09.p1k chr15 1135 1103 1087038 1087070 C 33 90.91 1459|0,5 reject_low 23 ALIGNMENT 0 YS2-16h09.q1k chr09 955 955 4578 4602 C 1 0.00 1385 reject_low 15 ALIGNMENT 1043 YS2-16h09.q1k chr12 1225 39 9157 10362 C 1187 96.80 1385 ambiguous_tel 1 ALIGNMENT 53 YS2-16h09.q1k chr14 913 857 4302 4358 C 57 98.25 1385 reject_low 16 ALIGNMENT 0 YS2-16h09.q1k chr05 914 929 572590 572651 F 16 0.00 1385 reject_low 12,26 ALIGNMENT 568 YS2-16h09.q1k chr05 855 39 4965 5732 C 817 92.53 1385 reject_low 18 ALIGNMENT 26 YS2-16h09.q1k chr10 988 956 4528 4560 C 33 93.94 1385|5,0 reject_low 17 ALIGNMENT 977 YS2-16h09.p1k chr14 37 1060 2593 3618 F 1024 98.73 1459 reject_low 16 ALIGNMENT 22 YS2-16h09.q1k chr12 930 954 1074024 1074048 F 25 96.00 1385 reject_low 9 ALIGNMENT 0 YS2-16h09.p1k chr12 1107 1108 1074102 1074132 C 0 0.00 1459 reject_low 28 ALIGNMENT 0 YS2-16h09.q1k chr05 929 914 4323 4384 C 16 0.00 1385 reject_low 18 ALIGNMENT 0 YS2-16h09.p1k chr12 1056 62 1074184 1074183 C 995 0.00 1459 reject_low 28 ALIGNMENT 0 YS2-16h09.q1k chr16 983 984 4040 4070 C 0 0.00 1385 reject_low 14 ALIGNMENT 25 YS2-16h09.p1k chr07 1135 1103 1086779 1086811 C 33 90.91 1459|0,5 reject_low 22 ALIGNMENT 0 YS2-16h09.p1k chr07 1056 62 1086889 1086888 C 995 0.00 1459 reject_low 22 ALIGNMENT 0 YS2-16h09.q1k chr12 955 955 1067386 1067410 F 1 0.00 1385 reject_low 13,25,28 ALIGNMENT 0 YS2-16h09.q1k chr12 856 856 1066719 1067241 F 1 0.00 1385 reject_low 13 ALIGNMENT 35 YS2-16h09.q1k chr12 979 1031 1074128 1074183 F 53 90.57 1385|5,0 reject_low 9 ALIGNMENT 0 YS2-16h09.q1k chr10 1030 1029 3986 4453 C 2 0.00 1385 reject_low 17 ALIGNMENT 0 YS2-16h09.q1k chr05 984 983 572730 572760 F 0 0.00 1385 reject_low 12,26 ALIGNMENT 35 YS2-16h09.q1k chr09 1028 979 4471 4523 C 50 92.00 1385|0,5 reject_low 15 ALIGNMENT 775 YS2-16h09.q1k chr09 855 39 5350 6166 C 817 98.78 1385 reject_low 15 ALIGNMENT 26 YS2-16h09.q1k chr05 956 988 572702 572734 F 33 93.94 1385|0,5 reject_low 12,26 ALIGNMENT 0 YS2-16h09.q1k chr12 914 929 1067299 1067360 F 16 0.00 1385 reject_low 13,25,28 ALIGNMENT 26 YS2-16h09.q1k chr12 956 988 1067411 1067443 F 33 93.94 1385|0,5 reject_low 13,25,28 ALIGNMENT 1043 YS2-16h09.q1k chr08 1225 39 3354 4559 C 1187 96.80 1385 ambiguous_tel 4 ALIGNMENT 53 YS2-16h09.q1k chr10 913 857 4673 4729 C 57 98.25 1385 reject_low 17 ALIGNMENT 22 YS2-16h09.q1k chr12 930 954 1067361 1067385 F 25 96.00 1385 reject_low 13,25,28 ALIGNMENT 0 YS2-16h09.p1k chr05 1108 1107 4214 4244 F 0 0.00 1459 reject_low 19 ALIGNMENT 43 YS2-16h09.p1k chr16 1057 1112 3989 4044 F 56 91.07 1459|0,5 reject_low 24 ALIGNMENT 22 YS2-16h09.q1k chr16 954 930 4124 4148 C 25 96.00 1385 reject_low 14 ALIGNMENT 26 YS2-16h09.q1k chr09 988 956 4545 4577 C 33 93.94 1385|5,0 reject_low 15 ALIGNMENT 53 YS2-16h09.q1k chr12 857 913 1067242 1067298 F 57 98.25 1385 reject_low 13,25,28 ALIGNMENT 1040 YS2-16h09.q1k chr13 1225 39 3498 4703 C 1187 96.71 1385 ambiguous_tel 2 ALIGNMENT 641 YS2-16h09.q1k chr12 39 855 1065934 1066718 F 817 94.74 1385 reject_low 13 ALIGNMENT 971 YS2-16h09.p1k chr05 37 1060 2657 3682 F 1024 98.54 1459 reject_low 18 ALIGNMENT 977 YS2-16h09.p1k chr05 1060 37 573273 574298 C 1024 98.73 1459 reject_low 12 ALIGNMENT 87 YS2-16h09.q1k chr12 1031 1225 1067986 1068195 F 195 84.10 1385|1,0 reject_low 28 ALIGNMENT 90 YS2-16h09.q1k chr14 1225 1031 3405 3614 C 195 84.62 1385|0,1 reject_low 16 ALIGNMENT 0 YS2-16h09.q1k chr04 955 955 1527848 1527872 F 1 0.00 1385 reject_low 8 ALIGNMENT 0 YS2-16h09.p1k chr16 1108 1107 4040 4070 F 0 0.00 1459 reject_low 24 ALIGNMENT 0 YS2-16h09.q1k chr12 955 955 1074049 1074073 F 1 0.00 1385 reject_low 9 ALIGNMENT 22 YS2-16h09.q1k chr15 930 954 1086988 1087012 F 25 96.00 1385 reject_low 10 ALIGNMENT 0 YS2-16h09.q1k chr15 914 929 1086926 1086987 F 16 0.00 1385 reject_low 10 ALIGNMENT 0 YS2-16h09.q1k chr12 984 983 1067439 1067469 F 0 0.00 1385 reject_low 13,25,28 ALIGNMENT 0 YS2-16h09.q1k chr05 856 856 571931 572532 F 1 0.00 1385 reject_low 12 ALIGNMENT 1079 YS2-16h09.p1k chr13 37 1254 2686 3914 F 1218 96.63 1459 ambiguous_tel 2 ALIGNMENT 1073 YS2-16h09.p1k chr08 37 1254 2542 3770 F 1218 96.47 1459 ambiguous_tel 4 ALIGNMENT 22 YS2-16h09.q1k chr10 954 930 4586 4610 C 25 96.00 1385 reject_low 17 ALIGNMENT 980 YS2-16h09.p1k chr12 1060 37 1074645 1075670 C 1024 98.83 1459 reject_low 9 ALIGNMENT 1082 YS2-16h09.p1k chr12 37 1254 8345 9573 F 1218 96.72 1459 ambiguous_tel 1 ALIGNMENT 977 YS2-16h09.p1k chr07 1060 37 1087350 1088375 C 1024 98.73 1459 reject_low 11 ALIGNMENT 22 YS2-16h09.q1k chr07 930 954 1086729 1086753 F 25 96.00 1385 reject_low 11,27 ALIGNMENT 1073 YS2-16h09.p1k chr08 1254 37 558592 559820 C 1218 96.55 1459 ambiguous_tel 7 ALIGNMENT 778 YS2-16h09.q1k chr14 855 39 4961 5777 C 817 98.90 1385 reject_low 16 ALIGNMENT 35 YS2-16h09.q1k chr07 979 1031 1086833 1086888 F 53 90.57 1385|5,0 reject_low 11,27 ALIGNMENT 0 YS2-16h09.p1k chr15 1056 62 1087148 1087147 C 995 0.00 1459 reject_low 23 ALIGNMENT 0 YS2-16h09.p1k chr16 62 1056 3989 3988 F 995 0.00 1459 reject_low 24 ALIGNMENT 26 YS2-16h09.q1k chr12 956 988 1074074 1074106 F 33 93.94 1385|0,5 reject_low 9 ALIGNMENT 53 YS2-16h09.q1k chr15 857 913 1086869 1086925 F 57 98.25 1385 reject_low 10 ALIGNMENT 22 YS2-16h09.q1k chr04 930 954 1527823 1527847 F 25 96.00 1385 reject_low 8 ALIGNMENT 0 YS2-16h09.q1k chr16 955 955 4099 4123 C 1 0.00 1385 reject_low 14 ALIGNMENT 965 YS2-16h09.p1k chr10 37 1060 2964 3989 F 1024 98.34 1459 reject_low 17 ALIGNMENT 93 YS2-16h09.q1k chr12 1031 1225 1074649 1074858 F 195 85.13 1385|1,0 reject_low 25 ALIGNMENT 0 YS2-16h09.q1k chr12 62 856 1067242 1067241 F 795 0.00 1385 reject_low 25,28 ALIGNMENT 0 YS2-16h09.q1k chr07 856 856 1086008 1086609 F 1 0.00 1385 reject_low 11 ALIGNMENT 1073 YS2-16h09.p1k chr02 37 1254 3011 4239 F 1218 96.47 1459 ambiguous_tel 6 ALIGNMENT 0 YS2-16h09.q1k chr12 856 856 1073303 1073904 F 1 0.00 1385 reject_low 9 ALIGNMENT 977 YS2-16h09.p1k chr16 37 1060 2502 3527 F 1024 98.73 1459 reject_low 14 ALIGNMENT 0 YS2-16h09.q1k chr05 983 984 4214 4244 C 0 0.00 1385 reject_low 18 ALIGNMENT 26 YS2-16h09.q1k chr14 988 956 4157 4189 C 33 93.94 1385|5,0 reject_low 16 ALIGNMENT 0 YS2-16h09.q1k chr15 955 955 1087013 1087037 F 1 0.00 1385 reject_low 10 ALIGNMENT 26 YS2-16h09.q1k chr16 988 956 4066 4098 C 33 93.94 1385|5,0 reject_low 14 ALIGNMENT 26 YS2-16h09.q1k chr07 956 988 1086779 1086811 F 33 93.94 1385|0,5 reject_low 11,27 ALIGNMENT 46 YS2-16h09.p1k chr05 1057 1112 4163 4218 F 56 92.86 1459|0,5 reject_low 19 ALIGNMENT 0 YS2-16h09.p1k chr07 1107 1108 1086807 1086837 C 0 0.00 1459 reject_low 22 ALIGNMENT 0 YS2-16h09.q1k chr05 856 856 4442 4964 C 1 0.00 1385 reject_low 18 ALIGNMENT 25 YS2-16h09.p1k chr16 1103 1135 4066 4098 F 33 90.91 1459|5,0 reject_low 24 ALIGNMENT 0 YS2-16h09.p1k chr05 62 1056 4163 4162 F 995 0.00 1459 reject_low 19 ALIGNMENT 980 YS2-16h09.p1k chr15 1060 37 1087609 1088634 C 1024 98.83 1459 reject_low 10 ALIGNMENT 90 YS2-16h09.q1k chr07 1031 1225 1087354 1087563 F 195 84.62 1385|1,0 reject_low 27 ALIGNMENT 26 YS2-16h09.q1k chr15 956 988 1087038 1087070 F 33 93.94 1385|0,5 reject_low 10 ALIGNMENT 0 YS2-16h09.q1k chr09 983 984 4519 4549 C 0 0.00 1385 reject_low 15 ALIGNMENT 1043 YS2-16h09.q1k chr12 1225 39 3622 4827 C 1187 96.80 1385 ambiguous_tel 0 ALIGNMENT 0 YS2-16h09.q1k chr12 914 929 1073962 1074023 F 16 0.00 1385 reject_low 9 ALIGNMENT 0 YS2-16h09.q1k chr14 929 914 4240 4301 C 16 0.00 1385 reject_low 16 ALIGNMENT 22 YS2-16h09.q1k chr05 954 930 4298 4322 C 25 96.00 1385 reject_low 18 ALIGNMENT 1022 YS2-16h09.q1k chr08 39 1225 557804 559008 F 1187 96.29 1385 ambiguous_tel 7 ALIGNMENT 974 YS2-16h09.p1k chr12 1060 37 1067982 1069007 C 1024 98.63 1459 reject_low 13 ALIGNMENT 0 YS2-16h09.q1k chr07 984 983 1086807 1086837 F 0 0.00 1385 reject_low 11,27 ALIGNMENT 53 YS2-16h09.q1k chr12 857 913 1073905 1073961 F 57 98.25 1385 reject_low 9 ALIGNMENT 35 YS2-16h09.q1k chr10 1028 979 4454 4506 C 50 92.00 1385|0,5 reject_low 17 ALIGNMENT 25 YS2-16h09.p1k chr09 1103 1135 4545 4577 F 33 90.91 1459|5,0 reject_low 21 ALIGNMENT 0 YS2-16h09.q1k chr14 856 856 4359 4960 C 1 0.00 1385 reject_low 16 ALIGNMENT 0 YS2-16h09.q1k chr15 984 983 1087066 1087096 F 0 0.00 1385 reject_low 10 ALIGNMENT 1036 YS2-16h09.q1k chr06 1225 39 2659 3865 C 1187 96.63 1385 ambiguous_tel 5 ALIGNMENT 778 YS2-16h09.q1k chr07 39 855 1085191 1086007 F 817 98.90 1385 reject_low 11 ALIGNMENT 1076 YS2-16h09.p1k chr06 37 1254 1847 3075 F 1218 96.55 1459 ambiguous_tel 5 ALIGNMENT 0 YS2-16h09.q1k chr07 914 929 1086667 1086728 F 16 0.00 1385 reject_low 11,27 ALIGNMENT 22 YS2-16h09.q1k chr14 954 930 4215 4239 C 25 96.00 1385 reject_low 16 ALIGNMENT 784 YS2-16h09.q1k chr04 39 855 1526285 1527101 F 817 99.14 1385 reject_low 8 ALIGNMENT 0 YS2-16h09.q1k chr12 1032 1031 1067521 1067986 F 0 0.00 1385 reject_low 28 ALIGNMENT 0 YS2-16h09.q1k chr09 929 914 4628 4689 C 16 0.00 1385 reject_low 15 ALIGNMENT 53 YS2-16h09.q1k chr16 913 857 4211 4267 C 57 98.25 1385 reject_low 14 ALIGNMENT 43 YS2-16h09.p1k chr09 1060 1112 4471 4523 F 53 92.45 1459|0,5 reject_low 21 ALIGNMENT 22 YS2-16h09.q1k chr05 930 954 572652 572676 F 25 96.00 1385 reject_low 12,26 ALIGNMENT 0 YS2-16h09.q1k chr07 1032 1031 1086889 1087354 F 0 0.00 1385 reject_low 27 ALIGNMENT 0 YS2-16h09.q1k chr10 929 914 4611 4672 C 16 0.00 1385 reject_low 17 ALIGNMENT 53 YS2-16h09.q1k chr05 913 857 4385 4441 C 57 98.25 1385 reject_low 18 ALIGNMENT 0 YS2-16h09.q1k chr07 62 856 1086610 1086609 F 795 0.00 1385 reject_low 27 ALIGNMENT 0 YS2-16h09.q1k chr14 983 984 4131 4161 C 0 0.00 1385 reject_low 16 ALIGNMENT 43 YS2-16h09.p1k chr12 1112 1057 1074128 1074183 C 56 91.07 1459|5,0 reject_low 28 ALIGNMENT 1028 YS2-16h09.q1k chr02 1225 39 3823 5028 C 1187 96.38 1385 ambiguous_tel 6 ALIGNMENT 53 YS2-16h09.q1k chr09 913 857 4690 4746 C 57 98.25 1385 reject_low 15 ALIGNMENT 35 YS2-16h09.q1k chr15 979 1031 1087092 1087147 F 53 90.57 1385|5,0 reject_low 10 ALIGNMENT 46 YS2-16h09.p1k chr12 1112 1057 1067465 1067520 C 56 92.86 1459|5,0 reject_low 20 ALIGNMENT 25 YS2-16h09.p1k chr05 1103 1135 4240 4272 F 33 90.91 1459|5,0 reject_low 19 ALIGNMENT 778 YS2-16h09.q1k chr16 855 39 4870 5686 C 817 98.90 1385 reject_low 14 ALIGNMENT 53 YS2-16h09.q1k chr04 857 913 1527704 1527760 F 57 98.25 1385 reject_low 8 ALIGNMENT 0 YS2-16h09.q1k chr10 856 856 4730 5332 C 1 0.00 1385 reject_low 17 ALIGNMENT 35 YS2-16h09.q1k chr16 1031 979 3989 4044 C 53 90.57 1385|0,5 reject_low 14 ALIGNMENT 784 YS2-16h09.q1k chr15 39 855 1085450 1086266 F 817 99.14 1385 reject_low 10 ALIGNMENT 53 YS2-16h09.q1k chr05 857 913 572533 572589 F 57 98.25 1385 reject_low 12,26 ALIGNMENT 90 YS2-16h09.q1k chr10 1225 1031 3776 3985 C 195 84.62 1385 reject_low 17 ALIGNMENT 43 YS2-16h09.p1k chr15 1112 1057 1087092 1087147 C 56 91.07 1459|5,0 reject_low 23 ALIGNMENT 26 YS2-16h09.q1k chr05 988 956 4240 4272 C 33 93.94 1385|5,0 reject_low 18 ALIGNMENT 0 YS2-16h09.q1k chr04 856 856 1527102 1527703 F 1 0.00 1385 reject_low 8 ALIGNMENT 1039 YS2-16h09.q1k chr16 39 1225 943349 944555 F 1187 96.71 1385 ambiguous_tel 3 ALIGNMENT 26 YS2-16h09.q1k chr04 956 988 1527873 1527905 F 33 93.94 1385 reject_low 8 ALIGNMENT 113 YS2-16h10.q1k vc_6 229 1 5766 6012 C 229 86.46 368 reject_low 1 ALIGNMENT 112 YS2-16h10.q1k scplasm1 229 2 6073 6318 C 228 86.40 368 accept 0 ALIGNMENT 620 YS2-16h10.p1k scplasm1 37 976 2009 2950 F 940 89.47 1392 accept 0 ALIGNMENT 0 YS2-16h11.p1k chr11 679 661 620848 620847 C 19 0.00 679 accept_chi 0 ALIGNMENT 0 YS2-16h11.q1k chr11 673 713 621475 621474 F 41 0.00 713 accept_chi 1 ALIGNMENT 38 YS2-16h11.q1k vc_7 676 713 13525 13562 F 38 100.00 713 reject_low 7 ALIGNMENT 0 YS2-16h11.q1k vc_7 62 675 13525 13524 F 614 0.00 713 reject_low 7 ALIGNMENT 36 YS2-16h11.q1k vc_5 710 675 1 36 C 36 100.00 713 reject_low 8 ALIGNMENT 0 YS2-16h11.q1k vc_2 672 62 2146 2145 C 611 0.00 713 reject_low 3 ALIGNMENT 569 YS2-16h11.q1k chr11 44 672 620847 621475 F 629 98.89 713 accept_chi 1 ALIGNMENT 0 YS2-16h11.q1k vc_5 674 62 5064 5063 C 613 0.00 713 reject_low 6 ALIGNMENT 41 YS2-16h11.q1k vc_4 673 713 5831 5871 F 41 100.00 713 reject_low 5 ALIGNMENT 39 YS2-16h11.q1k vc_5 713 675 5025 5063 C 39 100.00 713 reject_low 6 ALIGNMENT 0 YS2-16h11.q1k vc_5 674 62 37 36 C 613 0.00 713 reject_low 8 ALIGNMENT 0 YS2-16h11.q1k vc_1 672 62 2513 2512 C 611 0.00 713 reject_low 2 ALIGNMENT 41 YS2-16h11.q1k vc_2 713 673 2105 2145 C 41 100.00 713 reject_low 3 ALIGNMENT 41 YS2-16h11.q1k vc_1 713 673 2472 2512 C 41 100.00 713 reject_low 2 ALIGNMENT 41 YS2-16h11.q1k vc_3 713 673 2472 2512 C 41 100.00 713 reject_low 4 ALIGNMENT 0 YS2-16h11.q1k vc_4 62 672 5831 5830 F 611 0.00 713 reject_low 5 ALIGNMENT 0 YS2-16h11.q1k vc_3 672 62 2513 2512 C 611 0.00 713 reject_low 4 ALIGNMENT 573 YS2-16h11.p1k chr11 660 33 620847 621475 C 628 99.04 679 accept_chi 0 ALIGNMENT 276 YS2-16h14.q1k vc_3 1 296 2689 2985 F 296 97.97 716 reject_low 10 ALIGNMENT 0 YS2-16h14.q1k vc_4 237 62 113 112 C 176 0.00 716 reject_low 13 ALIGNMENT 0 YS2-16h14.q1k vc_4 62 237 1548 1547 F 176 0.00 716 reject_low 11 ALIGNMENT 419 YS2-16h14.q1k vc_7 662 1 1903 2569 C 662 88.97 716 reject_vc 1 ALIGNMENT 214 YS2-16h14.p1k vc_7 1 418 456 853 F 418 87.08 529 reject_vc 1 ALIGNMENT 0 YS2-16h14.q1k vc_7 53 54 5172 6360 C 0 0.00 716 reject_low 12 ALIGNMENT 221 YS2-16h14.q1k vc_7 296 53 4928 5172 C 244 97.54 716|0,1 reject_low 12 ALIGNMENT 220 YS2-16h14.p1k vc_2 418 1 1352 1749 C 418 87.56 529 reject_low 3 ALIGNMENT 0 YS2-16h14.q1k vc_7 302 297 4700 4927 C 6 0.00 716 reject_low 12 ALIGNMENT 220 YS2-16h14.p1k vc_3 418 1 1352 1749 C 418 87.56 529 reject_low 4 ALIGNMENT 0 YS2-16h14.q1k vc_4 297 305 1608 1878 F 9 0.00 716 reject_low 11 ALIGNMENT 220 YS2-16h14.p1k vc_1 418 1 1352 1749 C 418 87.56 529 reject_low 2 ALIGNMENT 220 YS2-16h14.p1k vc_5 418 1 4272 4669 C 418 87.56 529 reject_vc 0 ALIGNMENT 51 YS2-16h14.q1k vc_4 296 238 6280 6339 C 59 96.61 716 reject_low 14 ALIGNMENT 51 YS2-16h14.q1k vc_7 54 3 6360 6411 C 52 100.00 716|1,0 reject_low 12 ALIGNMENT 0 YS2-16h14.q1k vc_4 237 62 6340 6339 C 176 0.00 716 reject_low 14 ALIGNMENT 419 YS2-16h14.q1k vc_5 1 662 2556 3222 F 662 89.12 716 reject_vc 0 ALIGNMENT 276 YS2-16h14.q1k vc_2 1 296 2322 2618 F 296 97.97 716 reject_low 9 ALIGNMENT 214 YS2-16h14.p1k vc_7 1 418 13918 14315 F 418 87.08 529 reject_low 6 ALIGNMENT 345 YS2-16h14.q1k vc_4 420 1 5232 5654 C 420 95.00 716 reject_low 7 ALIGNMENT 137 YS2-16h14.q1k vc_4 306 662 1879 2238 F 357 81.79 716 reject_low 11 ALIGNMENT 276 YS2-16h14.q1k vc_1 1 296 2689 2985 F 296 97.97 716 reject_low 8 ALIGNMENT 220 YS2-16h14.p1k vc_6 1 418 3712 4109 F 418 87.56 529 reject_low 5 ALIGNMENT 51 YS2-16h14.q1k vc_4 238 296 1548 1607 F 59 96.61 716 reject_low 11 ALIGNMENT 51 YS2-16h14.q1k vc_4 296 238 53 112 C 59 96.61 716 reject_low 13 ALIGNMENT 75 YS2-16h14.q1k vc_7 420 303 4583 4699 C 118 89.83 716 reject_low 12 ALIGNMENT 872 YS2-16h15.q1k chr01 50 1119 196446 197518 F 1070 94.95 1378 accept 0 ALIGNMENT 1000 YS2-16h16.p1k chr04 42 1155 1367231 1368355 F 1114 97.67 1278 accept 0 ALIGNMENT 995 YS2-16h16.q1k chr04 1259 38 1372429 1373669 C 1222 95.58 1347 accept 0 ALIGNMENT 950 YS2-16h18.q1k chr04 34 1312 1440772 1442045 F 1279 93.82 1361 accept 0 ALIGNMENT 1007 YS2-16h18.p1k chr04 1222 40 1444605 1445796 C 1183 95.69 1284 accept 0 ALIGNMENT 1007 YS2-16h19.q1k chr12 1098 43 451695 452756 C 1056 98.67 1292 reject_low 1 ALIGNMENT 0 YS2-16h19.p1k chr12 380 872 489481 489480 F 493 0.00 1289 reject_low 2 ALIGNMENT 0 YS2-16h19.p1k chr12 365 872 472582 472581 F 508 0.00 1289 reject_low 4 ALIGNMENT 316 YS2-16h19.p1k chr12 40 364 468606 468930 F 325 99.69 1289 reject_low 3 ALIGNMENT 0 YS2-16h19.p1k chr12 365 872 485814 485813 F 508 0.00 1289 reject_low 6 ALIGNMENT 119 YS2-16h19.p1k chr12 246 364 485696 485814 F 119 100.00 1289 reject_low 6 ALIGNMENT 0 YS2-16h19.p1k chr12 365 872 468930 468929 F 508 0.00 1289 reject_low 3 ALIGNMENT 0 YS2-16h19.p1k chr12 62 245 489348 489347 F 184 0.00 1289 reject_low 2 ALIGNMENT 119 YS2-16h19.p1k chr12 246 364 482044 482162 F 119 100.00 1289 reject_low 5 ALIGNMENT 0 YS2-16h19.p1k chr12 62 245 482044 482043 F 184 0.00 1289 reject_low 5 ALIGNMENT 1007 YS2-16h19.q1k chr12 1098 43 460832 461893 C 1056 98.67 1292 accept 0 ALIGNMENT 877 YS2-16h19.p1k chr12 40 1233 459469 460689 F 1194 93.13 1289 accept 0 ALIGNMENT 0 YS2-16h19.p1k chr12 365 872 482162 482161 F 508 0.00 1289 reject_low 5 ALIGNMENT 128 YS2-16h19.p1k chr12 246 379 489348 489481 F 134 98.51 1289 reject_low 2 ALIGNMENT 736 YS2-16h19.q1k chr12 1011 224 489754 490543 C 788 97.84 1292 reject_low 2 ALIGNMENT 0 YS2-16h19.p1k chr12 62 245 485696 485695 F 184 0.00 1289 reject_low 6 ALIGNMENT 0 YS2-16h19.p1k chr12 62 245 472464 472463 F 184 0.00 1289 reject_low 4 ALIGNMENT 119 YS2-16h19.p1k chr12 246 364 472464 472582 F 119 100.00 1289 reject_low 4 ALIGNMENT 0 YS2-16h19.q1k chr12 223 62 490544 490543 C 162 0.00 1292 reject_low 2 ALIGNMENT 993 YS2-16h20.p1k chr02 1257 33 164875 166098 C 1225 94.61 1263 accept 0 ALIGNMENT 1003 YS2-16h20.q1k chr02 39 1248 160778 162003 F 1210 95.70 1332 accept 0 ALIGNMENT 0 YS2-16h21.q1k vc_5 171 62 37 36 C 110 0.00 210 reject_low 7 ALIGNMENT 0 YS2-16h21.q1k vc_3 170 62 2512 2511 C 109 0.00 210 reject_low 3 ALIGNMENT 40 YS2-16h21.q1k vc_1 210 171 2472 2511 C 40 100.00 210 reject_low 1 ALIGNMENT 40 YS2-16h21.q1k vc_4 171 210 5832 5871 F 40 100.00 210 reject_low 4 ALIGNMENT 38 YS2-16h21.q1k vc_7 173 210 13525 13562 F 38 100.00 210 reject_low 6 ALIGNMENT 0 YS2-16h21.q1k chr06 171 210 22581 22580 F 40 0.00 210 accept 0 ALIGNMENT 0 YS2-16h21.q1k vc_5 171 62 5064 5063 C 110 0.00 210 reject_low 5 ALIGNMENT 40 YS2-16h21.q1k vc_2 210 171 2105 2144 C 40 100.00 210 reject_low 2 ALIGNMENT 0 YS2-16h21.q1k vc_2 170 62 2145 2144 C 109 0.00 210 reject_low 2 ALIGNMENT 36 YS2-16h21.q1k vc_5 207 172 1 36 C 36 100.00 210 reject_low 7 ALIGNMENT 0 YS2-16h21.q1k vc_7 62 172 13525 13524 F 111 0.00 210 reject_low 6 ALIGNMENT 125 YS2-16h21.q1k chr06 41 170 22452 22581 F 130 99.23 210 accept 0 ALIGNMENT 40 YS2-16h21.q1k vc_3 210 171 2472 2511 C 40 100.00 210 reject_low 3 ALIGNMENT 39 YS2-16h21.q1k vc_5 210 172 5025 5063 C 39 100.00 210 reject_low 5 ALIGNMENT 0 YS2-16h21.q1k vc_1 170 62 2512 2511 C 109 0.00 210 reject_low 1 ALIGNMENT 0 YS2-16h21.q1k vc_4 62 170 5832 5831 F 109 0.00 210 reject_low 4 ALIGNMENT 843 YS2-16h22.q1k chr02 31 1193 7158 8306 F 1163 92.43 1295 reject_low 1 ALIGNMENT 752 YS2-16h22.q1k chr10 31 1212 8320 9494 F 1182 89.51 1295 reject_low 3 ALIGNMENT 0 YS2-16h22.p1k chr02 62 408 808950 808949 F 347 0.00 1233 reject_low 18 ALIGNMENT 650 YS2-16h22.p1k chr07 966 32 6195 7125 C 935 90.70 1233 reject_low 14 ALIGNMENT 314 YS2-16h22.p1k chr05 492 871 63710 64089 F 380 94.47 1233 reject_low 23 ALIGNMENT 0 YS2-16h22.q1k chr09 415 62 434363 434362 C 354 0.00 1295 reject_low 10 ALIGNMENT 848 YS2-16h22.p1k chr14 32 1184 781443 782584 F 1153 92.45 1233 accept_tel 0 ALIGNMENT 0 YS2-16h22.q1k chr07 62 387 6195 6194 F 326 0.00 1295 reject_low 16 ALIGNMENT 849 YS2-16h22.p1k chr02 1184 32 7301 8445 C 1153 92.45 1233 reject_low 1 ALIGNMENT 393 YS2-16h22.q1k chr07 944 359 1080211 1080790 C 586 90.10 1295 reject_low 22 ALIGNMENT 0 YS2-16h22.q1k chr05 481 62 64091 64090 C 420 0.00 1295 reject_low 25 ALIGNMENT 0 YS2-16h22.q1k chr03 673 62 290194 290193 C 612 0.00 1295 reject_low 29 ALIGNMENT 0 YS2-16h22.q1k chr15 81 62 1083611 1083610 C 20 0.00 1295 reject_low 11 ALIGNMENT 0 YS2-16h22.p1k chr04 62 148 1522874 1522873 F 87 0.00 1233 reject_low 12,26 ALIGNMENT 205 YS2-16h22.q1k chr01 458 853 176631 177031 F 396 85.10 1295 reject_low 28 ALIGNMENT 630 YS2-16h22.q1k chr04 875 31 1523200 1524051 C 845 92.31 1295 reject_low 12 ALIGNMENT 0 YS2-16h22.q1k chr08 62 450 11890 11889 F 389 0.00 1295 reject_low 20 ALIGNMENT 276 YS2-16h22.q1k chr13 1082 174 922408 923324 C 909 79.21 1295 reject_low 13 ALIGNMENT 398 YS2-16h22.p1k chr07 409 994 1080211 1080789 F 586 90.27 1233 reject_low 19 ALIGNMENT 670 YS2-16h22.q1k chr01 31 1212 1354 2522 F 1182 87.39 1295 reject_low 6 ALIGNMENT 614 YS2-16h22.q1k chr11 31 1133 1357 2464 F 1103 86.67 1295 reject_low 8 ALIGNMENT 0 YS2-16h22.p1k chr05 62 491 63710 63709 F 430 0.00 1233 reject_low 23 ALIGNMENT 0 YS2-16h22.q1k chr02 358 62 809535 809534 C 297 0.00 1295 reject_low 21 ALIGNMENT 0 YS2-16h22.q1k chr13 173 62 923325 923324 C 112 0.00 1295 reject_low 13 ALIGNMENT 416 YS2-16h22.q1k chr03 1293 341 307359 308309 C 953 83.32 1295 reject_low 9 ALIGNMENT 450 YS2-16h22.p1k chr04 478 1184 1523200 1523907 F 707 89.53 1233 reject_low 26 ALIGNMENT 0 YS2-16h22.p1k chr01 499 62 177032 177031 C 438 0.00 1233 reject_low 27 ALIGNMENT 328 YS2-16h22.q1k chr09 1212 416 433570 434362 C 797 82.43 1295 reject_low 10 ALIGNMENT 823 YS2-16h22.q1k chr12 31 1212 12635 13802 F 1182 91.37 1295 reject_low 2 ALIGNMENT 775 YS2-16h22.p1k chr09 1184 32 8481 9629 C 1153 90.55 1233 reject_low 5 ALIGNMENT 709 YS2-16h22.q1k chr15 31 1011 11103 12076 F 981 91.85 1295 reject_low 7 ALIGNMENT 756 YS2-16h22.q1k chr12 1212 31 1062560 1063725 C 1182 89.76 1295 reject_low 4 ALIGNMENT 210 YS2-16h22.p1k chr01 896 500 176631 177031 C 397 85.39 1233 reject_low 27 ALIGNMENT 391 YS2-16h22.p1k chr16 936 41 7873 8773 C 896 82.81 1233 reject_low 17 ALIGNMENT 400 YS2-16h22.q1k chr02 944 359 808950 809534 C 586 90.44 1295 reject_low 21 ALIGNMENT 848 YS2-16h22.q1k chr14 1293 31 781482 782728 C 1263 90.66 1295 accept_tel 0 ALIGNMENT 0 YS2-16h22.q1k chr01 62 457 176631 176630 F 396 0.00 1295 reject_low 28 ALIGNMENT 0 YS2-16h22.q1k chr16 62 417 7873 7872 F 356 0.00 1295 reject_low 24 ALIGNMENT 0 YS2-16h22.p1k chr04 257 899 1522980 1522979 F 643 0.00 1233 reject_low 12 ALIGNMENT 0 YS2-16h22.p1k chr07 62 408 1080211 1080210 F 347 0.00 1233 reject_low 19 ALIGNMENT 576 YS2-16h22.p1k chr15 1184 41 11247 12372 C 1144 85.40 1233 reject_low 7 ALIGNMENT 0 YS2-16h22.p1k chr05 872 899 64089 64088 F 28 0.00 1233 reject_low 23 ALIGNMENT 539 YS2-16h22.p1k chr09 32 938 433452 434362 F 907 87.54 1233 reject_low 10 ALIGNMENT 335 YS2-16h22.q1k chr15 1082 82 1082601 1083610 C 1001 80.22 1295 reject_low 11 ALIGNMENT 739 YS2-16h22.q1k chr09 31 1133 8337 9437 F 1103 90.48 1295 reject_low 5 ALIGNMENT 690 YS2-16h22.p1k chr01 1074 35 1602 2637 C 1040 90.10 1233 reject_low 6 ALIGNMENT 639 YS2-16h22.p1k chr11 1184 32 1502 2655 C 1153 86.64 1233 reject_low 8 ALIGNMENT 408 YS2-16h22.q1k chr08 451 1082 11890 12525 F 632 89.56 1295 reject_low 20 ALIGNMENT 565 YS2-16h22.p1k chr08 903 34 11890 12763 C 870 89.20 1233 reject_low 15 ALIGNMENT 775 YS2-16h22.p1k chr10 1184 32 8464 9612 C 1153 90.55 1233 reject_low 3 ALIGNMENT 366 YS2-16h22.p1k chr13 41 1052 922175 923188 F 1012 80.73 1233 reject_low 13 ALIGNMENT 455 YS2-16h22.q1k chr07 388 1212 6195 7007 F 825 86.79 1295 reject_low 16 ALIGNMENT 293 YS2-16h22.q1k chr16 418 1082 7873 8540 F 665 83.31 1295 reject_low 24 ALIGNMENT 752 YS2-16h22.p1k chr12 35 1184 1062449 1063580 F 1150 90.17 1233 reject_low 4 ALIGNMENT 842 YS2-16h22.p1k chr12 1184 32 12779 13922 C 1153 92.11 1233 reject_low 2 ALIGNMENT 310 YS2-16h22.q1k chr05 861 482 63710 64090 C 380 94.21 1295 reject_low 25 ALIGNMENT 0 YS2-16h22.q1k chr07 358 62 1080791 1080790 C 297 0.00 1295 reject_low 22 ALIGNMENT 403 YS2-16h22.p1k chr02 409 994 808950 809533 F 586 90.27 1233 reject_low 18 ALIGNMENT 51 YS2-16h22.q1k chr03 870 674 289999 290193 C 197 77.66 1295 reject_low 29 ALIGNMENT 0 YS2-16h22.q1k chr03 340 62 308310 308309 C 279 0.00 1295 reject_low 9 ALIGNMENT 388 YS2-16h22.p1k chr15 41 1052 1082368 1083382 F 1012 81.42 1233 reject_low 11 ALIGNMENT 0 YS2-16h22.p1k chr04 257 477 1522981 1523199 F 221 0.00 1233 reject_low 26 ALIGNMENT 616 YS2-16h22.p1k chr03 35 1013 307323 308309 F 979 88.66 1233 reject_low 9 ALIGNMENT 24 YS2-16h22.p1k chr04 149 256 1522874 1522980 F 108 75.93 1233 reject_low 12,26 ALIGNMENT 984 YS2-16h23.q1k chr12 1153 42 462570 463689 C 1112 96.31 1245 manual 0 ALIGNMENT 1077 YS2-16h23.p1k chr12 46 1270 453322 454547 F 1225 96.65 1272 manual 1 ALIGNMENT 984 YS2-16h23.q1k chr12 1148 42 453439 454552 C 1107 96.39 1245 manual 1 ALIGNMENT 1077 YS2-16h23.p1k chr12 46 1270 462459 463684 F 1225 96.65 1272 manual 0 ALIGNMENT 943 YS2-16i01.q1k chr13 1159 45 465482 466622 C 1115 96.77 1249 accept 0 ALIGNMENT 984 YS2-16i01.p1k chr13 39 1225 465062 466237 F 1187 96.12 1280 accept 0 ALIGNMENT 1051 YS2-16i02.p1k chr08 1260 37 371065 372291 C 1224 96.16 1265 accept 0 ALIGNMENT 1063 YS2-16i02.q1k chr08 33 1225 366779 367974 F 1193 96.98 1266 accept 0 ALIGNMENT 925 YS2-16i03.q1k chr13 45 1196 89199 90361 F 1152 94.44 1267 accept 0 ALIGNMENT 1035 YS2-16i03.p1k chr13 1270 43 92973 94215 C 1228 96.01 1288 accept 0 ALIGNMENT 0 YS2-16i04.p1k chr12 899 796 18569 18568 C 104 0.00 1308 reject_low 1 ALIGNMENT 1062 YS2-16i04.p1k chr16 1306 31 23054 24327 C 1276 95.61 1308 accept 0 ALIGNMENT 102 YS2-16i04.p1k chr12 795 38 18568 19325 C 758 71.90 1308 reject_low 1 ALIGNMENT 1002 YS2-16i04.q1k chr16 40 1278 21828 23067 F 1239 94.75 1280 accept 0 ALIGNMENT 40 YS2-16i05.q1k vc_4 179 218 5832 5871 F 40 100.00 218 reject_low 3 ALIGNMENT 0 YS2-16i05.q1k vc_5 179 62 37 36 C 118 0.00 218 reject_low 6 ALIGNMENT 0 YS2-16i05.q1k vc_1 178 62 2512 2511 C 117 0.00 218 reject_low 1 ALIGNMENT 40 YS2-16i05.q1k vc_3 218 179 2472 2511 C 40 100.00 218 reject_low 2 ALIGNMENT 0 YS2-16i05.q1k vc_7 62 180 13525 13524 F 119 0.00 218 reject_low 5 ALIGNMENT 129 YS2-16i05.q1k chr16 178 40 401938 402076 C 139 99.28 218 accept 0 ALIGNMENT 0 YS2-16i05.q1k vc_3 178 62 2512 2511 C 117 0.00 218 reject_low 2 ALIGNMENT 0 YS2-16i05.q1k vc_4 62 178 5832 5831 F 117 0.00 218 reject_low 3 ALIGNMENT 0 YS2-16i05.q1k vc_5 179 62 5064 5063 C 118 0.00 218 reject_low 4 ALIGNMENT 0 YS2-16i05.q1k chr16 218 179 401939 401938 C 40 0.00 218 accept 0 ALIGNMENT 38 YS2-16i05.q1k vc_7 181 218 13525 13562 F 38 100.00 218 reject_low 5 ALIGNMENT 39 YS2-16i05.q1k vc_5 218 180 5025 5063 C 39 100.00 218 reject_low 4 ALIGNMENT 40 YS2-16i05.q1k vc_1 218 179 2472 2511 C 40 100.00 218 reject_low 1 ALIGNMENT 36 YS2-16i05.q1k vc_5 215 180 1 36 C 36 100.00 218 reject_low 6 ALIGNMENT 1091 YS2-16i06.p1k chr02 1282 34 665147 666405 C 1249 96.40 1336 accept 0 ALIGNMENT 1021 YS2-16i06.q1k chr02 40 1205 662135 663311 F 1166 96.74 1319 accept 0 ALIGNMENT 0 YS2-16i07.q1k vc_4 77 183 5830 5829 F 107 0.00 225 reject_low 4 ALIGNMENT 135 YS2-16i07.q1k chr04 186 37 1421424 1421570 C 150 98.00 225 accept 0 ALIGNMENT 0 YS2-16i07.q1k vc_2 183 77 2147 2146 C 107 0.00 225 reject_low 2 ALIGNMENT 39 YS2-16i07.q1k vc_5 225 187 5025 5063 C 39 100.00 225 reject_low 5 ALIGNMENT 42 YS2-16i07.q1k vc_2 225 184 2105 2146 C 42 100.00 225 reject_low 2 ALIGNMENT 0 YS2-16i07.q1k vc_3 183 77 2514 2513 C 107 0.00 225 reject_low 3 ALIGNMENT 0 YS2-16i07.q1k chr04 225 187 1421425 1421424 C 39 0.00 225 accept 0 ALIGNMENT 0 YS2-16i07.q1k vc_1 183 77 2514 2513 C 107 0.00 225 reject_low 1 ALIGNMENT 0 YS2-16i07.q1k vc_5 186 77 5064 5063 C 110 0.00 225 reject_low 5 ALIGNMENT 42 YS2-16i07.q1k vc_4 184 225 5830 5871 F 42 100.00 225 reject_low 4 ALIGNMENT 42 YS2-16i07.q1k vc_1 225 184 2472 2513 C 42 100.00 225 reject_low 1 ALIGNMENT 36 YS2-16i07.q1k vc_5 222 187 1 36 C 36 100.00 225 reject_low 7 ALIGNMENT 38 YS2-16i07.q1k vc_7 188 225 13525 13562 F 38 100.00 225 reject_low 6 ALIGNMENT 42 YS2-16i07.q1k vc_3 225 184 2472 2513 C 42 100.00 225 reject_low 3 ALIGNMENT 0 YS2-16i07.q1k vc_7 77 187 13525 13524 F 111 0.00 225 reject_low 6 ALIGNMENT 0 YS2-16i07.q1k vc_5 186 77 37 36 C 110 0.00 225 reject_low 7 ALIGNMENT 931 YS2-16i08.q1k chr05 1087 35 297196 298258 C 1053 97.06 1303 accept 0 ALIGNMENT 1048 YS2-16i08.p1k chr05 41 1213 293646 294829 F 1173 96.93 1359 accept 0 ALIGNMENT 0 YS2-16i09.q1k vc_7 463 422 4584 4583 C 42 0.00 1005 reject_low 8 ALIGNMENT 65 YS2-16i09.q1k vc_4 304 238 46 112 C 67 100.00 1005 reject_low 9 ALIGNMENT 0 YS2-16i09.q1k vc_7 304 304 4700 4921 C 1 0.00 1005 reject_low 8 ALIGNMENT 0 YS2-16i09.p1k chr09 212 194 416911 416910 C 19 0.00 212 ambiguous_tel 2 ALIGNMENT 247 YS2-16i09.q1k vc_7 303 53 4922 5172 C 251 99.60 1005|0,1 reject_low 8 ALIGNMENT 0 YS2-16i09.q1k vc_4 463 422 5233 5232 C 42 0.00 1005 reject_low 4 ALIGNMENT 0 YS2-16i09.q1k vc_3 304 463 2991 2990 F 160 0.00 1005 reject_low 7 ALIGNMENT 0 YS2-16i09.q1k vc_1 304 463 2991 2990 F 160 0.00 1005 reject_low 5 ALIGNMENT 0 YS2-16i09.q1k vc_4 237 62 113 112 C 176 0.00 1005 reject_low 9 ALIGNMENT 302 YS2-16i09.q1k vc_3 1 303 2689 2991 F 303 100.00 1005 reject_low 7 ALIGNMENT 302 YS2-16i09.q1k vc_2 1 303 2322 2624 F 303 100.00 1005 reject_low 6 ALIGNMENT 0 YS2-16i09.q1k vc_4 237 62 6340 6339 C 176 0.00 1005 reject_low 10 ALIGNMENT 0 YS2-16i09.q1k vc_4 463 305 6274 6273 C 159 0.00 1005 reject_low 10 ALIGNMENT 0 YS2-16i09.q1k vc_4 463 305 47 46 C 159 0.00 1005 reject_low 9 ALIGNMENT 413 YS2-16i09.q1k vc_4 421 1 5232 5654 C 421 99.52 1005 reject_low 4 ALIGNMENT 679 YS2-16i09.q1k vc_7 813 1 1750 2569 C 813 94.83 1005 reject_vc 1 ALIGNMENT 115 YS2-16i09.q1k vc_7 421 305 4583 4699 C 117 100.00 1005 reject_low 8 ALIGNMENT 0 YS2-16i09.q1k vc_2 304 463 2624 2623 F 160 0.00 1005 reject_low 6 ALIGNMENT 0 YS2-16i09.q1k vc_4 305 307 1615 1878 F 3 0.00 1005 reject_vc 3 ALIGNMENT 65 YS2-16i09.q1k vc_4 304 238 6273 6339 C 67 100.00 1005 reject_low 10 ALIGNMENT 65 YS2-16i09.q1k vc_4 238 304 1548 1614 F 67 100.00 1005 reject_vc 3 ALIGNMENT 370 YS2-16i09.q1k vc_4 308 886 1879 2470 F 579 88.95 1005 reject_vc 3 ALIGNMENT 146 YS2-16i09.p1k chr09 193 37 416910 417066 C 157 99.36 212 ambiguous_tel 2 ALIGNMENT 51 YS2-16i09.q1k vc_7 54 3 6360 6411 C 52 100.00 1005|1,0 reject_low 8 ALIGNMENT 302 YS2-16i09.q1k vc_1 1 303 2689 2991 F 303 100.00 1005 reject_low 5 ALIGNMENT 0 YS2-16i09.q1k vc_7 53 54 5172 6360 C 0 0.00 1005 reject_low 8 ALIGNMENT 680 YS2-16i09.q1k vc_5 1 886 2556 3454 F 886 92.89 1005 reject_vc 0 ALIGNMENT 0 YS2-16i09.q1k vc_4 62 237 1548 1547 F 176 0.00 1005 reject_vc 3 ALIGNMENT 0 YS2-16i11.q1k vc_3 210 62 2513 2512 C 149 0.00 251 reject_low 3 ALIGNMENT 36 YS2-16i11.q1k vc_5 248 213 1 36 C 36 100.00 251 reject_low 7 ALIGNMENT 38 YS2-16i11.q1k vc_7 214 251 13525 13562 F 38 100.00 251 reject_low 6 ALIGNMENT 0 YS2-16i11.q1k vc_1 210 62 2513 2512 C 149 0.00 251 reject_low 2 ALIGNMENT 0 YS2-16i11.q1k vc_7 62 213 13525 13524 F 152 0.00 251 reject_low 6 ALIGNMENT 41 YS2-16i11.q1k vc_4 211 251 5831 5871 F 41 100.00 251 reject_low 4 ALIGNMENT 41 YS2-16i11.q1k vc_3 251 211 2472 2512 C 41 100.00 251 reject_low 3 ALIGNMENT 0 YS2-16i11.q1k chr16 251 211 586757 586756 C 41 0.00 251 accept_chi 0 ALIGNMENT 41 YS2-16i11.q1k vc_1 251 211 2472 2512 C 41 100.00 251 reject_low 2 ALIGNMENT 0 YS2-16i11.q1k vc_5 212 62 37 36 C 151 0.00 251 reject_low 7 ALIGNMENT 0 YS2-16i11.p1k chr16 192 209 586925 586924 F 18 0.00 209 accept_chi 1 ALIGNMENT 0 YS2-16i11.q1k vc_4 62 210 5831 5830 F 149 0.00 251 reject_low 4 ALIGNMENT 39 YS2-16i11.q1k vc_5 251 213 5025 5063 C 39 100.00 251 reject_low 5 ALIGNMENT 146 YS2-16i11.p1k chr16 32 191 586766 586925 F 160 98.12 209 accept_chi 1 ALIGNMENT 0 YS2-16i11.q1k vc_5 212 62 5064 5063 C 151 0.00 251 reject_low 5 ALIGNMENT 157 YS2-16i11.q1k chr16 210 41 586756 586925 C 170 98.82 251 accept_chi 0 ALIGNMENT 1027 YS2-16i14.p1k chr12 38 1209 322661 323839 F 1172 96.16 1304 accept 0 ALIGNMENT 947 YS2-16i14.q1k chr12 1183 50 326522 327673 C 1134 95.59 1383 accept 0 ALIGNMENT 41 YS2-16i15.q1k vc_1 546 506 2472 2512 C 41 100.00 546 reject_low 2 ALIGNMENT 0 YS2-16i15.q1k chr11 506 546 39610 39609 F 41 0.00 546 accept_chi 0 ALIGNMENT 38 YS2-16i15.q1k vc_7 509 546 13525 13562 F 38 100.00 546 reject_low 7 ALIGNMENT 40 YS2-16i15.q1k vc_5 546 504 5025 5067 C 43 97.67 546 reject_low 6 ALIGNMENT 0 YS2-16i15.q1k vc_5 503 62 5068 5067 C 442 0.00 546 reject_low 6 ALIGNMENT 0 YS2-16i15.q1k vc_4 62 505 5831 5830 F 444 0.00 546 reject_low 5 ALIGNMENT 0 YS2-16i15.p1k chr11 520 502 39154 39153 C 19 0.00 520 accept_chi 1 ALIGNMENT 41 YS2-16i15.q1k vc_3 546 506 2472 2512 C 41 100.00 546 reject_low 4 ALIGNMENT 0 YS2-16i15.q1k vc_3 505 62 2513 2512 C 444 0.00 546 reject_low 4 ALIGNMENT 41 YS2-16i15.q1k vc_4 506 546 5831 5871 F 41 100.00 546 reject_low 5 ALIGNMENT 0 YS2-16i15.q1k vc_1 505 62 2513 2512 C 444 0.00 546 reject_low 2 ALIGNMENT 0 YS2-16i15.q1k vc_5 503 62 41 40 C 442 0.00 546 reject_low 8 ALIGNMENT 37 YS2-16i15.q1k vc_5 543 504 1 40 C 40 97.50 546 reject_low 8 ALIGNMENT 0 YS2-16i15.q1k vc_2 505 62 2146 2145 C 444 0.00 546 reject_low 3 ALIGNMENT 448 YS2-16i15.q1k chr11 48 505 39153 39610 F 458 99.56 546 accept_chi 0 ALIGNMENT 0 YS2-16i15.q1k vc_7 62 508 13525 13524 F 447 0.00 546 reject_low 7 ALIGNMENT 444 YS2-16i15.p1k chr11 501 43 39153 39610 C 459 99.35 520 accept_chi 1 ALIGNMENT 41 YS2-16i15.q1k vc_2 546 506 2105 2145 C 41 100.00 546 reject_low 3 ALIGNMENT 1005 YS2-16i18.p1k chr12 45 1192 456126 457288 F 1148 96.25 1281 accept 0 ALIGNMENT 952 YS2-16i18.q1k chr12 1096 37 466241 467315 C 1060 97.55 1314 accept 1 ALIGNMENT 1005 YS2-16i18.p1k chr12 45 1192 465263 466425 F 1148 96.25 1281 accept 1 ALIGNMENT 952 YS2-16i18.q1k chr12 1096 37 457104 458178 C 1060 97.55 1314 accept 0 ALIGNMENT 0 YS2-16i19.q1k vc_5 197 236 2996 2995 F 40 0.00 236 reject_vc 0 ALIGNMENT 41 YS2-16i19.q1k vc_2 236 196 2105 2145 C 41 100.00 236 reject_low 6 ALIGNMENT 0 YS2-16i19.q1k vc_4 197 196 2013 5831 F 0 0.00 236 reject_low 4 ALIGNMENT 0 YS2-16i19.q1k vc_2 195 62 2146 2145 C 134 0.00 236 reject_low 6 ALIGNMENT 41 YS2-16i19.q1k vc_3 236 196 2472 2512 C 41 100.00 236 reject_low 7 ALIGNMENT 0 YS2-16i19.q1k vc_7 236 177 4584 4583 C 60 0.00 236 reject_low 3 ALIGNMENT 0 YS2-16i19.q1k vc_5 197 62 5064 5063 C 136 0.00 236 reject_low 8 ALIGNMENT 41 YS2-16i19.q1k vc_4 196 236 5831 5871 F 41 100.00 236|1,0 reject_low 4 ALIGNMENT 0 YS2-16i19.q1k vc_7 62 198 13525 13524 F 137 0.00 236 reject_low 9 ALIGNMENT 36 YS2-16i19.q1k vc_5 233 198 1 36 C 36 100.00 236 reject_low 10 ALIGNMENT 151 YS2-16i19.q1k vc_7 196 41 2129 2284 C 156 100.00 236 reject_vc 1 ALIGNMENT 115 YS2-16i19.q1k vc_7 176 60 4583 4699 C 117 100.00 236 reject_low 3 ALIGNMENT 39 YS2-16i19.q1k vc_5 236 198 5025 5063 C 39 100.00 236 reject_low 8 ALIGNMENT 0 YS2-16i19.q1k vc_1 195 62 2513 2512 C 134 0.00 236 reject_low 5 ALIGNMENT 41 YS2-16i19.q1k vc_1 236 196 2472 2512 C 41 100.00 236 reject_low 5 ALIGNMENT 0 YS2-16i19.q1k vc_7 236 197 2130 2129 C 40 0.00 236 reject_vc 1 ALIGNMENT 0 YS2-16i19.q1k vc_3 195 62 2513 2512 C 134 0.00 236 reject_low 7 ALIGNMENT 132 YS2-16i19.q1k vc_4 176 41 5232 5367 C 136 100.00 236 reject_vc 2 ALIGNMENT 0 YS2-16i19.q1k vc_4 236 177 5233 5232 C 60 0.00 236 reject_vc 2 ALIGNMENT 38 YS2-16i19.q1k vc_7 199 236 13525 13562 F 38 100.00 236 reject_low 9 ALIGNMENT 0 YS2-16i19.q1k vc_5 197 62 37 36 C 136 0.00 236 reject_low 10 ALIGNMENT 151 YS2-16i19.q1k vc_5 41 196 2841 2996 F 156 100.00 236 reject_vc 0 ALIGNMENT 131 YS2-16i19.q1k vc_4 63 196 1879 2012 F 134 100.00 236 reject_low 4 ALIGNMENT 128 YS2-16i22.q1k chr12 483 616 489348 489481 F 134 98.51 1271 reject_low 3 ALIGNMENT 0 YS2-16i22.q1k chr12 62 482 485696 485695 F 421 0.00 1271 reject_low 7 ALIGNMENT 0 YS2-16i22.q1k chr12 62 482 472464 472463 F 421 0.00 1271 reject_low 5 ALIGNMENT 0 YS2-16i22.q1k chr06 115 62 31730 31729 C 54 0.00 1271 reject_low 4 ALIGNMENT 1069 YS2-16i22.p1k chr12 1232 42 454200 455385 C 1191 97.23 1234 reject_low 1 ALIGNMENT 119 YS2-16i22.q1k chr12 483 601 472464 472582 F 119 100.00 1271 reject_low 5 ALIGNMENT 0 YS2-16i22.q1k chr12 602 848 482162 482161 F 247 0.00 1271 reject_low 6 ALIGNMENT 0 YS2-16i22.q1k chr06 848 224 31623 31622 C 625 0.00 1271 reject_low 4 ALIGNMENT 0 YS2-16i22.q1k chr12 62 482 489348 489347 F 421 0.00 1271 reject_low 3 ALIGNMENT 119 YS2-16i22.q1k chr12 483 601 482044 482162 F 119 100.00 1271 reject_low 6 ALIGNMENT 94 YS2-16i22.q1k chr06 223 116 31622 31729 C 108 98.15 1271 reject_low 4 ALIGNMENT 850 YS2-16i22.q1k chr12 38 997 459230 460201 F 960 97.50 1271 accept 0 ALIGNMENT 119 YS2-16i22.q1k chr12 483 601 485696 485814 F 119 100.00 1271 reject_low 7 ALIGNMENT 0 YS2-16i22.q1k chr12 602 848 485814 485813 F 247 0.00 1271 reject_low 7 ALIGNMENT 0 YS2-16i22.q1k chr12 602 848 472582 472581 F 247 0.00 1271 reject_low 5 ALIGNMENT 0 YS2-16i22.q1k chr12 617 848 489481 489480 F 232 0.00 1271 reject_low 3 ALIGNMENT 542 YS2-16i22.q1k chr12 38 601 468367 468930 F 564 99.65 1271 reject_low 2 ALIGNMENT 1069 YS2-16i22.p1k chr12 1232 42 463337 464522 C 1191 97.23 1234 accept 0 ALIGNMENT 0 YS2-16i22.q1k chr12 62 482 482044 482043 F 421 0.00 1271 reject_low 6 ALIGNMENT 0 YS2-16i22.q1k chr12 602 848 468930 468929 F 247 0.00 1271 reject_low 2 ALIGNMENT 983 YS2-16i23.p1k chr04 41 1165 1056724 1057847 F 1125 96.44 1211 accept 0 ALIGNMENT 76 YS2-16j01.q1k chr06 755 680 137479 137554 C 76 100.00 1273 reject_low 9 ALIGNMENT 0 YS2-16j01.q1k chr07 62 674 731137 731136 F 613 0.00 1273 reject_low 3 ALIGNMENT 0 YS2-16j01.q1k chr15 763 881 487522 487521 F 119 0.00 1273 reject_low 4 ALIGNMENT 0 YS2-16j01.q1k chr16 62 678 810671 810670 F 617 0.00 1273 reject_low 8 ALIGNMENT 0 YS2-16j01.q1k chr15 762 881 228410 228409 F 120 0.00 1273 reject_low 6 ALIGNMENT 0 YS2-16j01.q1k chr14 62 679 632601 632600 F 618 0.00 1273 reject_low 2 ALIGNMENT 79 YS2-16j01.q1k chr15 680 761 228329 228410 F 82 98.78 1273 reject_low 6 ALIGNMENT 944 YS2-16j01.p1k chr03 1202 31 128096 129269 C 1172 95.14 1258 accept 0 ALIGNMENT 78 YS2-16j01.q1k chr07 675 755 731137 731217 F 81 98.77 1273 reject_low 3 ALIGNMENT 77 YS2-16j01.q1k chr11 680 762 74629 74711 F 83 97.59 1273 reject_low 7 ALIGNMENT 0 YS2-16j01.q1k chr11 62 679 74629 74628 F 618 0.00 1273 reject_low 7 ALIGNMENT 76 YS2-16j01.q1k chr16 679 754 810671 810746 F 76 100.00 1273 reject_low 8 ALIGNMENT 0 YS2-16j01.q1k chr06 679 62 137555 137554 C 618 0.00 1273 reject_low 9 ALIGNMENT 0 YS2-16j01.q1k chr12 672 62 976059 976058 C 611 0.00 1273 reject_low 1 ALIGNMENT 83 YS2-16j01.q1k chr15 680 762 487440 487522 F 83 100.00 1273 reject_low 4 ALIGNMENT 80 YS2-16j01.q1k chr14 680 762 102716 102798 F 83 98.80 1273 reject_low 5 ALIGNMENT 0 YS2-16j01.q1k chr15 62 679 228329 228328 F 618 0.00 1273 reject_low 6 ALIGNMENT 0 YS2-16j01.q1k chr16 755 881 810746 810745 F 127 0.00 1273 reject_low 8 ALIGNMENT 0 YS2-16j01.q1k chr06 881 756 137480 137479 C 126 0.00 1273 reject_low 9 ALIGNMENT 0 YS2-16j01.q1k chr12 881 763 975971 975970 C 119 0.00 1273 reject_low 1 ALIGNMENT 0 YS2-16j01.q1k chr14 766 881 632685 632684 F 116 0.00 1273 reject_low 2 ALIGNMENT 0 YS2-16j01.q1k chr15 62 679 487440 487439 F 618 0.00 1273 reject_low 4 ALIGNMENT 0 YS2-16j01.q1k chr07 756 881 731217 731216 F 126 0.00 1273 reject_low 3 ALIGNMENT 0 YS2-16j01.q1k chr14 62 679 102716 102715 F 618 0.00 1273 reject_low 5 ALIGNMENT 885 YS2-16j01.q1k chr03 42 1273 127102 128324 F 1232 92.86 1273 accept 0 ALIGNMENT 0 YS2-16j01.q1k chr14 763 881 102798 102797 F 119 0.00 1273 reject_low 5 ALIGNMENT 82 YS2-16j01.q1k chr12 762 673 975970 976058 C 90 97.78 1273 reject_low 1 ALIGNMENT 78 YS2-16j01.q1k chr14 680 765 632601 632685 F 86 97.67 1273 reject_low 2 ALIGNMENT 0 YS2-16j01.q1k chr11 763 881 74711 74710 F 119 0.00 1273 reject_low 7 ALIGNMENT 1042 YS2-16j03.q1k chr14 37 1233 266952 268158 F 1197 97.08 1272 accept 0 ALIGNMENT 1052 YS2-16j03.p1k chr14 1161 35 270976 272111 C 1127 98.67 1266 accept 0 ALIGNMENT 587 YS2-16j04.p1k chr12 198 1036 60095 60926 F 839 92.61 1329 accept 0 ALIGNMENT 616 YS2-16j04.q1k chr12 894 46 65394 66237 C 849 91.40 1395 accept 0 ALIGNMENT 206 YS2-16j05.p1k chr01 329 1 160262 160594 C 329 90.27 709 ambiguous_trans 23 ALIGNMENT 0 YS2-16j05.p1k chr03 301 318 84686 84685 F 18 0.00 709 ambiguous_trans_ua 31 ALIGNMENT 0 YS2-16j05.p1k chr04 224 62 987273 987272 C 163 0.00 709 ambiguous_trans 27 ALIGNMENT 286 YS2-16j05.p1k chr12 20 349 941189 941517 F 330 97.58 709 ambiguous_trans 16 ALIGNMENT 285 YS2-16j05.p1k chr02 20 349 9093 9421 F 330 97.58 709 ambiguous_trans_ua 17 ALIGNMENT 309 YS2-16j05.p1k chr07 349 1 568748 569095 C 349 98.28 709 ambiguous_trans 3 ALIGNMENT 286 YS2-16j05.p1k chr07 20 349 811452 811780 F 330 97.58 709 ambiguous_trans 15 ALIGNMENT 59 YS2-16j05.p1k chr03 295 20 142803 143077 C 276 77.17 709 ambiguous_trans_ua 28 ALIGNMENT 188 YS2-16j05.p1k chr01 329 20 165850 166163 C 310 89.68 709 ambiguous_trans 24 ALIGNMENT 0 YS2-16j05.q1k chr15 272 908 105710 105709 F 637 0.00 1323 reject_low 12 ALIGNMENT 283 YS2-16j05.p1k chr15 20 345 970282 970606 F 326 97.85 709 ambiguous_trans 18 ALIGNMENT 301 YS2-16j05.p1k chr14 347 1 562039 562384 C 347 97.69 709 ambiguous_trans_ua 9 ALIGNMENT 0 YS2-16j05.p1k chr02 171 318 9000 8999 F 148 0.00 709 ambiguous_trans_ua 32 ALIGNMENT 0 YS2-16j05.q1k chr15 62 229 105669 105668 F 168 0.00 1323 reject_low 12 ALIGNMENT 957 YS2-16j05.q1k chr08 1107 40 94978 96053 C 1068 97.47 1323 accept 0 ALIGNMENT 289 YS2-16j05.p1k chr05 356 20 135604 135939 C 337 97.33 709 ambiguous_trans_ua 2 ALIGNMENT 36 YS2-16j05.p1k chr03 241 300 84626 84686 F 60 88.33 709 ambiguous_trans_ua 31 ALIGNMENT 304 YS2-16j05.p1k chr03 1 349 90418 90765 F 349 97.71 709 ambiguous_trans 6 ALIGNMENT 28 YS2-16j05.p1k chr02 69 170 8899 9000 F 102 79.41 709 ambiguous_trans_ua 32 ALIGNMENT 297 YS2-16j05.p1k chr04 348 1 513689 514035 C 348 97.13 709 ambiguous_trans 10 ALIGNMENT 306 YS2-16j05.p1k chr12 349 1 976257 976604 C 349 97.99 709 ambiguous_trans 5 ALIGNMENT 254 YS2-16j05.p1k chr03 329 19 168618 168929 C 311 96.14 709 ambiguous_trans_ua 21 ALIGNMENT 305 YS2-16j05.p1k chr15 1 348 975890 976236 F 348 97.99 709 ambiguous_trans 8 ALIGNMENT 288 YS2-16j05.p1k chr04 20 349 981165 981493 F 330 97.88 709 ambiguous_trans 13 ALIGNMENT 265 YS2-16j05.p1k chr14 1 329 524711 525040 F 329 95.74 709 ambiguous_trans 19 ALIGNMENT 308 YS2-16j05.p1k chr06 1 355 143516 143869 F 355 97.46 709 ambiguous_trans 1 ALIGNMENT 53 YS2-16j05.p1k chr07 329 219 817421 817532 C 111 83.78 709 ambiguous_trans 30 ALIGNMENT 68 YS2-16j05.p1k chr04 329 225 987167 987272 C 105 89.52 709 ambiguous_trans 27 ALIGNMENT 83 YS2-16j05.p1k chr03 20 323 151518 151819 F 304 79.61 709 ambiguous_trans_ua 25 ALIGNMENT 273 YS2-16j05.p1k chr14 337 19 726630 726947 C 319 97.49 709 ambiguous_trans_ua 20 ALIGNMENT 59 YS2-16j05.p1k chr03 53 329 149513 149784 F 277 77.26 709 ambiguous_trans_ua 29 ALIGNMENT 0 YS2-16j05.p1k chr03 318 296 142804 142803 C 23 0.00 709 ambiguous_trans_ua 28 ALIGNMENT 0 YS2-16j05.p1k chr07 218 62 817533 817532 C 157 0.00 709 ambiguous_trans 30 ALIGNMENT 306 YS2-16j05.p1k chr04 1 349 986773 987120 F 349 97.99 709 ambiguous_trans 4 ALIGNMENT 26 YS2-16j05.q1k chr15 230 271 105669 105710 F 42 88.10 1323 reject_low 12 ALIGNMENT 291 YS2-16j05.p1k chr07 1 339 817060 817397 F 339 97.35 709 ambiguous_trans 11 ALIGNMENT 247 YS2-16j05.p1k chr14 20 329 519164 519474 F 310 95.48 709 ambiguous_trans 22 ALIGNMENT 0 YS2-16j05.p1k chr03 62 240 84626 84625 F 179 0.00 709 ambiguous_trans_ua 31 ALIGNMENT 304 YS2-16j05.p1k chr12 1 349 946797 947144 F 349 97.71 709 ambiguous_trans 7 ALIGNMENT 286 YS2-16j05.p1k chr03 20 349 84810 85138 F 330 97.58 709 ambiguous_trans 14 ALIGNMENT 81 YS2-16j05.p1k chr03 329 20 124154 124462 C 310 79.03 709 ambiguous_trans_ua 26 ALIGNMENT 29 YS2-16j06.q1k chr02 352 398 85321 85367 F 47 87.23 1328 reject_low 3 ALIGNMENT 39 YS2-16j06.q1k chr02 783 1020 85752 85993 F 238 73.11 1328 reject_low 3 ALIGNMENT 0 YS2-16j06.q1k chr12 491 781 96501 96791 F 291 0.00 1328 reject_low 1 ALIGNMENT 23 YS2-16j06.q1k chr01 258 286 140211 140239 F 29 93.10 1328 reject_low 2 ALIGNMENT 79 YS2-16j06.q1k chr01 782 1020 140741 140980 F 239 78.24 1328 reject_low 2 ALIGNMENT 0 YS2-16j06.q1k chr01 287 351 140240 140310 F 65 0.00 1328 reject_low 2 ALIGNMENT 0 YS2-16j06.q1k chr02 62 351 85321 85320 F 290 0.00 1328 reject_low 3 ALIGNMENT 60 YS2-16j06.q1k chr12 782 993 96792 97004 F 212 76.89 1328 reject_low 1 ALIGNMENT 0 YS2-16j06.q1k chr01 491 781 140450 140740 F 291 0.00 1328 reject_low 2 ALIGNMENT 0 YS2-16j06.q1k chr01 62 257 140211 140210 F 196 0.00 1328 reject_low 2 ALIGNMENT 967 YS2-16j06.q1k chr10 1213 29 381644 382833 C 1185 94.68 1328 accept 0 ALIGNMENT 915 YS2-16j06.p1k chr10 31 1092 378448 379510 F 1062 96.61 1342 accept 0 ALIGNMENT 0 YS2-16j06.q1k chr02 399 782 85368 85751 F 384 0.00 1328 reject_low 3 ALIGNMENT 42 YS2-16j06.q1k chr01 352 490 140311 140449 F 139 77.70 1328 reject_low 2 ALIGNMENT 86 YS2-16j06.q1k chr12 59 490 96064 96500 F 432 75.00 1328 reject_low 1 ALIGNMENT 0 YS2-16j07.q1k vc_7 62 399 13525 13524 F 338 0.00 437 reject_low 6 ALIGNMENT 0 YS2-16j07.q1k vc_2 396 62 2146 2145 C 335 0.00 437 reject_low 3 ALIGNMENT 0 YS2-16j07.p1k chr04 388 405 1269389 1269388 F 18 0.00 405 accept_chi 1 ALIGNMENT 349 YS2-16j07.q1k chr04 396 37 1269030 1269389 C 360 99.72 437 accept_chi 0 ALIGNMENT 38 YS2-16j07.q1k vc_7 400 437 13525 13562 F 38 100.00 437 reject_low 6 ALIGNMENT 0 YS2-16j07.q1k chr04 437 397 1269031 1269030 C 41 0.00 437 accept_chi 0 ALIGNMENT 344 YS2-16j07.p1k chr04 29 387 1269030 1269389 F 359 99.44 405 accept_chi 1 ALIGNMENT 41 YS2-16j07.q1k vc_4 397 437 5831 5871 F 41 100.00 437 reject_low 5 ALIGNMENT 0 YS2-16j07.q1k vc_4 62 396 5831 5830 F 335 0.00 437 reject_low 5 ALIGNMENT 0 YS2-16j07.q1k vc_1 396 62 2513 2512 C 335 0.00 437 reject_low 2 ALIGNMENT 41 YS2-16j07.q1k vc_3 437 397 2472 2512 C 41 100.00 437 reject_low 4 ALIGNMENT 0 YS2-16j07.q1k vc_3 396 62 2513 2512 C 335 0.00 437 reject_low 4 ALIGNMENT 41 YS2-16j07.q1k vc_2 437 397 2105 2145 C 41 100.00 437 reject_low 3 ALIGNMENT 41 YS2-16j07.q1k vc_1 437 397 2472 2512 C 41 100.00 437 reject_low 2 ALIGNMENT 51 YS2-16j08.q1k vc_7 54 3 6360 6411 C 52 100.00 796|1,0 reject_vc 8 ALIGNMENT 438 YS2-16j08.q1k vc_5 1 668 2556 3217 F 668 90.42 796 reject_vc 1 ALIGNMENT 0 YS2-16j08.q1k vc_4 62 237 1548 1547 F 176 0.00 796 reject_vc 7 ALIGNMENT 0 YS2-16j08.q1k vc_7 302 302 4700 4921 C 1 0.00 796 reject_vc 8 ALIGNMENT 0 YS2-16j08.q1k vc_4 237 62 113 112 C 176 0.00 796 reject_low 9 ALIGNMENT 283 YS2-16j08.q1k vc_3 1 301 2689 2991 F 301 98.34 796 reject_vc 6 ALIGNMENT 0 YS2-16j08.q1k vc_4 303 305 1615 1878 F 3 0.00 796 reject_vc 7 ALIGNMENT 0 YS2-16j08.p1k chr04 388 405 1269389 1269388 F 18 0.00 405 accept 0 ALIGNMENT 0 YS2-16j08.q1k vc_7 53 54 5172 6360 C 0 0.00 796 reject_vc 8 ALIGNMENT 420 YS2-16j08.q1k vc_7 579 1 2001 2569 C 579 92.57 796 reject_vc 2 ALIGNMENT 46 YS2-16j08.q1k vc_4 302 238 6273 6339 C 65 92.31 796 reject_low 10 ALIGNMENT 0 YS2-16j08.q1k vc_4 237 62 6340 6339 C 176 0.00 796 reject_low 10 ALIGNMENT 283 YS2-16j08.q1k vc_2 1 301 2322 2624 F 301 98.34 796 reject_vc 5 ALIGNMENT 228 YS2-16j08.q1k vc_7 301 53 4922 5172 C 249 97.59 796|0,1 reject_vc 8 ALIGNMENT 146 YS2-16j08.q1k vc_4 306 668 1879 2233 F 363 83.75 796 reject_vc 7 ALIGNMENT 313 YS2-16j08.p1k chr04 50 387 1269052 1269389 F 338 98.52 405 accept 0 ALIGNMENT 362 YS2-16j08.q1k vc_4 419 1 5233 5654 C 419 96.18 796 reject_vc 3 ALIGNMENT 83 YS2-16j08.q1k vc_7 419 303 4584 4699 C 117 92.31 796 reject_vc 8 ALIGNMENT 46 YS2-16j08.q1k vc_4 238 302 1548 1614 F 65 92.31 796 reject_vc 7 ALIGNMENT 283 YS2-16j08.q1k vc_1 1 301 2689 2991 F 301 98.34 796 reject_vc 4 ALIGNMENT 46 YS2-16j08.q1k vc_4 302 238 46 112 C 65 92.31 796 reject_low 9 ALIGNMENT 994 YS2-16j09.q1k chr15 48 1191 765190 766342 F 1144 96.24 1376 accept 0 ALIGNMENT 1067 YS2-16j09.p1k chr15 1245 41 768602 769809 C 1205 96.68 1353 accept 0 ALIGNMENT 1029 YS2-16j10.q1k chr11 1231 30 485253 486468 C 1202 95.92 1358 accept 0 ALIGNMENT 1047 YS2-16j10.p1k chr11 30 1338 481552 482860 F 1309 94.88 1359 accept 0 ALIGNMENT 0 YS2-16j12.p1k chr10 62 578 378276 378275 F 517 0.00 1312 reject_low 3 ALIGNMENT 0 YS2-16j12.p1k chr05 659 933 469531 469530 F 275 0.00 1312 reject_low 4 ALIGNMENT 76 YS2-16j12.p1k chr15 657 578 663807 663886 C 80 98.75 1312 reject_low 11 ALIGNMENT 0 YS2-16j12.p1k chr05 660 933 438776 438775 F 274 0.00 1312 reject_low 10 ALIGNMENT 0 YS2-16j12.p1k chr11 577 62 307864 307863 C 516 0.00 1312 reject_low 7 ALIGNMENT 0 YS2-16j12.p1k chr13 933 658 420583 420582 C 276 0.00 1312 reject_low 9 ALIGNMENT 0 YS2-16j12.p1k chr11 933 660 307783 307782 C 274 0.00 1312 reject_low 7 ALIGNMENT 0 YS2-16j12.p1k chr13 578 62 420661 420660 C 517 0.00 1312 reject_low 9 ALIGNMENT 0 YS2-16j12.p1k chr15 933 658 663808 663807 C 276 0.00 1312 reject_low 11 ALIGNMENT 79 YS2-16j12.p1k chr13 657 579 420582 420660 C 79 100.00 1312 reject_low 9 ALIGNMENT 81 YS2-16j12.p1k chr13 659 578 372437 372518 C 82 100.00 1312 reject_low 2 ALIGNMENT 1017 YS2-16j12.q1k chr13 41 1241 582038 583243 F 1201 95.09 1366 accept 0 ALIGNMENT 75 YS2-16j12.p1k chr07 652 578 412297 412371 C 75 100.00 1312 reject_low 12 ALIGNMENT 0 YS2-16j12.p1k chr08 577 62 85369 85368 C 516 0.00 1312 reject_low 6 ALIGNMENT 78 YS2-16j12.p1k chr11 659 578 307782 307863 C 82 98.78 1312 reject_low 7 ALIGNMENT 0 YS2-16j12.p1k chr07 577 62 73903 73902 C 516 0.00 1312 reject_low 5 ALIGNMENT 78 YS2-16j12.p1k chr07 659 578 73821 73902 C 82 98.78 1312 reject_low 5 ALIGNMENT 984 YS2-16j12.p1k chr13 1197 44 586076 587244 C 1154 96.62 1312 accept 0 ALIGNMENT 0 YS2-16j12.p1k chr05 62 578 438696 438695 F 517 0.00 1312 reject_low 10 ALIGNMENT 0 YS2-16j12.p1k chr11 653 933 379396 379395 F 281 0.00 1312 reject_low 13 ALIGNMENT 0 YS2-16j12.p1k chr12 933 659 687856 687855 C 275 0.00 1312 reject_low 8 ALIGNMENT 0 YS2-16j12.p1k chr07 62 577 823486 823485 F 516 0.00 1312 reject_low 1 ALIGNMENT 0 YS2-16j12.p1k chr07 665 933 823571 823570 F 269 0.00 1312 reject_low 1 ALIGNMENT 77 YS2-16j12.p1k chr05 579 659 438696 438776 F 81 98.77 1312 reject_low 10 ALIGNMENT 0 YS2-16j12.p1k chr15 577 62 663887 663886 C 516 0.00 1312 reject_low 11 ALIGNMENT 79 YS2-16j12.p1k chr12 658 579 687855 687934 C 80 100.00 1312 reject_low 8 ALIGNMENT 74 YS2-16j12.p1k chr11 579 652 379323 379396 F 74 100.00 1312 reject_low 13 ALIGNMENT 78 YS2-16j12.p1k chr08 659 578 85287 85368 C 82 98.78 1312 reject_low 6 ALIGNMENT 0 YS2-16j12.p1k chr12 578 62 687935 687934 C 517 0.00 1312 reject_low 8 ALIGNMENT 0 YS2-16j12.p1k chr05 62 577 469451 469450 F 516 0.00 1312 reject_low 4 ALIGNMENT 0 YS2-16j12.p1k chr07 577 62 412372 412371 C 516 0.00 1312 reject_low 12 ALIGNMENT 0 YS2-16j12.p1k chr10 661 933 378357 378356 F 273 0.00 1312 reject_low 3 ALIGNMENT 0 YS2-16j12.p1k chr13 577 62 372519 372518 C 516 0.00 1312 reject_low 2 ALIGNMENT 82 YS2-16j12.p1k chr07 578 664 823486 823571 F 87 98.85 1312 reject_low 1 ALIGNMENT 0 YS2-16j12.p1k chr07 933 660 73822 73821 C 274 0.00 1312 reject_low 5 ALIGNMENT 80 YS2-16j12.p1k chr05 578 658 469451 469531 F 81 100.00 1312 reject_low 4 ALIGNMENT 0 YS2-16j12.p1k chr08 933 660 85288 85287 C 274 0.00 1312 reject_low 6 ALIGNMENT 0 YS2-16j12.p1k chr13 933 660 372438 372437 C 274 0.00 1312 reject_low 2 ALIGNMENT 78 YS2-16j12.p1k chr10 579 660 378276 378357 F 82 98.78 1312 reject_low 3 ALIGNMENT 0 YS2-16j12.p1k chr07 933 653 412298 412297 C 281 0.00 1312 reject_low 12 ALIGNMENT 0 YS2-16j12.p1k chr11 62 578 379323 379322 F 517 0.00 1312 reject_low 13 ALIGNMENT 0 YS2-16j13.p1k chr15 771 752 970283 970282 C 20 0.00 771 reject_low 34 ALIGNMENT 901 YS2-16j13.q1k chr04 45 1106 983345 984417 F 1062 96.33 1334 reject_low 9 ALIGNMENT 913 YS2-16j13.q1k chr12 45 1120 943369 944458 F 1076 96.38 1334 reject_low 2 ALIGNMENT 59 YS2-16j13.p1k chr03 476 751 142803 143077 F 276 77.17 771 reject_low 44 ALIGNMENT 0 YS2-16j13.p1k chr03 429 62 85132 85131 C 368 0.00 771 reject_low 36 ALIGNMENT 0 YS2-16j13.p1k chr03 771 719 149514 149513 C 53 0.00 771 reject_low 42 ALIGNMENT 106 YS2-16j13.p1k chr04 440 570 987164 987296 F 131 96.18 771 reject_low 41 ALIGNMENT 295 YS2-16j13.p1k chr07 771 443 817059 817387 C 329 98.78 771 reject_low 8 ALIGNMENT 309 YS2-16j13.q1k chr12 885 47 217968 218806 C 839 79.74 1334 reject_low 22 ALIGNMENT 103 YS2-16j13.p1k chr03 751 430 151518 151838 C 322 81.06 771 reject_low 40 ALIGNMENT 922 YS2-16j13.q1k chr07 45 1106 813632 814704 F 1062 96.99 1334 reject_low 8 ALIGNMENT 0 YS2-16j13.p1k chr09 419 62 246550 246549 C 358 0.00 771 reject_low 30 ALIGNMENT 362 YS2-16j13.p1k chr07 35 419 700858 701242 F 385 99.22 771 accept 0 ALIGNMENT 0 YS2-16j13.p1k chr03 440 62 84718 84717 C 379 0.00 771 reject_low 45 ALIGNMENT 312 YS2-16j13.q1k chr10 47 885 480161 480999 F 839 79.86 1334 reject_low 15 ALIGNMENT 108 YS2-16j13.p1k chr03 427 751 124138 124462 F 325 81.23 771 reject_low 39 ALIGNMENT 311 YS2-16j13.p1k chr12 430 771 976264 976605 F 342 99.12 771 reject_low 4 ALIGNMENT 931 YS2-16j13.q1k chr04 45 1106 873996 875068 F 1062 97.27 1334 reject_low 12 ALIGNMENT 0 YS2-16j13.p1k chr12 62 429 976264 976263 F 368 0.00 771 reject_low 4 ALIGNMENT 940 YS2-16j13.q1k chr14 1106 45 564740 565812 C 1062 97.55 1334 reject_low 5 ALIGNMENT 0 YS2-16j13.p1k chr05 752 771 135939 135938 F 20 0.00 771 reject_low 33 ALIGNMENT 0 YS2-16j13.p1k chr03 771 752 151519 151518 C 20 0.00 771 reject_low 40 ALIGNMENT 0 YS2-16j13.p1k chr01 62 426 165834 165833 F 365 0.00 771 reject_low 38 ALIGNMENT 288 YS2-16j13.p1k chr04 751 430 981165 981486 C 322 98.76 771 reject_low 31 ALIGNMENT 0 YS2-16j13.p1k chr07 771 662 701115 701114 C 110 0.00 771 reject_low 46 ALIGNMENT 0 YS2-16j13.p1k chr14 62 429 562044 562043 F 368 0.00 771 reject_low 5 ALIGNMENT 0 YS2-16j13.p1k chr03 420 771 149695 149694 F 352 0.00 771 reject_low 25 ALIGNMENT 922 YS2-16j13.q1k chr06 45 1106 140088 141160 F 1062 96.99 1334 reject_low 13 ALIGNMENT 0 YS2-16j13.p1k chr05 62 429 135618 135617 F 368 0.00 771 reject_low 33 ALIGNMENT 0 YS2-16j13.p1k chr03 62 475 142803 142802 F 414 0.00 771 reject_low 44 ALIGNMENT 312 YS2-16j13.q1k chr14 885 47 99491 100329 C 839 79.86 1334 reject_low 18 ALIGNMENT 276 YS2-16j13.p1k chr03 751 430 84810 85131 C 322 97.52 771 reject_low 36 ALIGNMENT 288 YS2-16j13.p1k chr05 430 751 135618 135939 F 322 98.76 771 reject_low 33 ALIGNMENT 940 YS2-16j13.q1k chr12 1106 45 978444 979516 C 1062 97.55 1334 reject_low 4 ALIGNMENT 312 YS2-16j13.q1k chr16 885 47 807524 808362 C 839 79.86 1334 reject_low 20 ALIGNMENT 0 YS2-16j13.p1k chr03 416 62 90772 90771 C 355 0.00 771 reject_low 1 ALIGNMENT 291 YS2-16j13.p1k chr08 416 751 389176 389512 F 336 97.92 771 reject_low 27 ALIGNMENT 0 YS2-16j13.p1k chr04 62 429 513695 513694 F 368 0.00 771 reject_low 7 ALIGNMENT 0 YS2-16j13.p1k chr04 429 62 1352956 1352955 C 368 0.00 771 reject_low 32 ALIGNMENT 0 YS2-16j13.p1k chr07 62 439 817418 817417 F 378 0.00 771 reject_low 43 ALIGNMENT 0 YS2-16j13.p1k chr04 429 62 987114 987113 C 368 0.00 771 reject_low 9 ALIGNMENT 928 YS2-16j13.q1k chr15 45 1106 972462 973534 F 1062 97.18 1334 reject_low 6 ALIGNMENT 0 YS2-16j13.p1k chr04 571 771 987296 987295 F 201 0.00 771 reject_low 41 ALIGNMENT 306 YS2-16j13.p1k chr14 413 752 726607 726947 F 340 99.12 771 reject_low 26 ALIGNMENT 0 YS2-16j13.p1k chr14 62 412 726607 726606 F 351 0.00 771 reject_low 26 ALIGNMENT 235 YS2-16j13.p1k chr01 427 771 160246 160595 F 345 91.88 771 reject_low 37 ALIGNMENT 31 YS2-16j13.p1k chr07 661 441 701114 701335 C 221 75.57 771 reject_low 46 ALIGNMENT 0 YS2-16j13.p1k chr04 62 439 645517 645516 F 378 0.00 771 reject_low 29 ALIGNMENT 0 YS2-16j13.p1k chr03 752 771 124462 124461 F 20 0.00 771 reject_low 39 ALIGNMENT 0 YS2-16j13.p1k chr15 429 62 970604 970603 C 368 0.00 771 reject_low 34 ALIGNMENT 0 YS2-16j13.p1k chr07 420 771 701242 701241 F 352 0.00 771 accept 0 ALIGNMENT 36 YS2-16j13.p1k chr03 284 419 149563 149695 F 136 80.88 771 reject_low 25 ALIGNMENT 309 YS2-16j13.q1k chr07 885 47 564730 565568 C 839 79.74 1334 reject_low 21 ALIGNMENT 0 YS2-16j13.p1k chr04 429 62 981487 981486 C 368 0.00 771 reject_low 31 ALIGNMENT 0 YS2-16j13.p1k chr03 418 62 149808 149807 C 357 0.00 771 reject_low 42 ALIGNMENT 312 YS2-16j13.q1k chr13 47 885 186364 187202 F 839 79.86 1334 reject_low 16 ALIGNMENT 28 YS2-16j13.p1k chr04 679 751 513514 513586 F 73 82.19 771 reject_low 47 ALIGNMENT 293 YS2-16j13.p1k chr14 430 771 562044 562385 F 342 97.37 771 reject_low 5 ALIGNMENT 299 YS2-16j13.p1k chr12 771 430 946796 947137 C 342 97.95 771 reject_low 2 ALIGNMENT 0 YS2-16j13.p1k chr04 752 771 513586 513585 F 20 0.00 771 reject_low 47 ALIGNMENT 288 YS2-16j13.p1k chr04 751 430 1352634 1352955 C 322 98.76 771 reject_low 32 ALIGNMENT 290 YS2-16j13.p1k chr04 440 771 645517 645850 F 332 98.19 771 reject_low 29 ALIGNMENT 0 YS2-16j13.p1k chr04 592 62 1353080 1353079 C 531 0.00 771 reject_low 49 ALIGNMENT 0 YS2-16j13.p1k chr01 752 771 166163 166162 F 20 0.00 771 reject_low 38 ALIGNMENT 907 YS2-16j13.q1k chr02 45 1120 31821 32910 F 1076 96.19 1334 reject_low 10 ALIGNMENT 0 YS2-16j13.p1k chr07 553 771 817532 817531 F 219 0.00 771 reject_low 43 ALIGNMENT 311 YS2-16j13.p1k chr07 430 771 568755 569096 F 342 99.12 771 reject_low 3 ALIGNMENT 925 YS2-16j13.q1k chr04 1106 45 516391 517463 C 1062 97.08 1334 reject_low 7 ALIGNMENT 0 YS2-16j13.p1k chr12 429 62 947138 947137 C 368 0.00 771 reject_low 2 ALIGNMENT 934 YS2-16j13.q1k chr15 1106 45 706771 707843 C 1062 97.36 1334 reject_low 11 ALIGNMENT 70 YS2-16j13.p1k chr07 440 552 817418 817532 F 113 89.38 771 reject_low 43 ALIGNMENT 309 YS2-16j13.q1k chr12 885 47 478861 479699 C 839 79.74 1334 reject_low 23 ALIGNMENT 0 YS2-16j13.q1k chr16 217 62 854180 854179 C 156 0.00 1334 reject_low 28 ALIGNMENT 308 YS2-16j13.p1k chr15 771 430 975889 976230 C 342 98.83 771 reject_low 6 ALIGNMENT 0 YS2-16j13.p1k chr03 62 426 124138 124137 F 365 0.00 771 reject_low 39 ALIGNMENT 0 YS2-16j13.p1k chr01 62 426 160246 160245 F 365 0.00 771 reject_low 37 ALIGNMENT 0 YS2-16j13.p1k chr04 62 678 513514 513513 F 617 0.00 771 reject_low 47 ALIGNMENT 0 YS2-16j13.p1k chr15 429 62 976231 976230 C 368 0.00 771 reject_low 6 ALIGNMENT 919 YS2-16j13.q1k chr03 45 1120 86990 88079 F 1076 96.56 1334 reject_low 1 ALIGNMENT 0 YS2-16j13.p1k chr04 771 712 1352963 1352962 C 60 0.00 771 reject_low 49 ALIGNMENT 78 YS2-16j13.p1k chr03 718 419 149513 149807 C 300 79.33 771 reject_low 42 ALIGNMENT 0 YS2-16j13.p1k chr07 442 62 817388 817387 C 381 0.00 771 reject_low 8 ALIGNMENT 44 YS2-16j13.p1k chr03 530 441 84626 84717 C 90 85.56 771 reject_low 45 ALIGNMENT 0 YS2-16j13.p1k chr04 771 752 1352635 1352634 C 20 0.00 771 reject_low 32 ALIGNMENT 0 YS2-16j13.p1k chr15 62 424 976258 976257 F 363 0.00 771 reject_low 48 ALIGNMENT 308 YS2-16j13.p1k chr04 771 430 986772 987113 C 342 98.83 771 reject_low 9 ALIGNMENT 281 YS2-16j13.p1k chr03 427 752 168602 168929 F 326 97.85 771 reject_low 35 ALIGNMENT 0 YS2-16j13.p1k chr07 440 62 701336 701335 C 379 0.00 771 reject_low 46 ALIGNMENT 0 YS2-16j13.p1k chr03 771 531 84627 84626 C 241 0.00 771 reject_low 45 ALIGNMENT 312 YS2-16j13.q1k chr13 47 885 198531 199369 F 839 79.86 1334 reject_low 17 ALIGNMENT 945 YS2-16j13.q1k chr07 1106 45 571451 572524 C 1062 97.74 1334 reject_low 3 ALIGNMENT 0 YS2-16j13.p1k chr14 753 771 726947 726946 F 19 0.00 771 reject_low 26 ALIGNMENT 285 YS2-16j13.p1k chr09 751 420 246217 246549 C 332 97.59 771 reject_low 30 ALIGNMENT 288 YS2-16j13.p1k chr15 751 430 970282 970603 C 322 98.76 771 reject_low 34 ALIGNMENT 299 YS2-16j13.p1k chr03 771 417 90417 90771 C 355 96.90 771 reject_low 1 ALIGNMENT 27 YS2-16j13.p1k chr15 425 506 976258 976337 F 82 84.15 771 reject_low 48 ALIGNMENT 305 YS2-16j13.p1k chr04 430 771 513695 514036 F 342 98.54 771 reject_low 7 ALIGNMENT 27 YS2-16j13.p1k chr04 711 593 1352962 1353079 C 119 78.15 771 reject_low 49 ALIGNMENT 315 YS2-16j13.q1k chr10 47 885 474577 475415 F 839 79.98 1334 reject_low 14 ALIGNMENT 0 YS2-16j13.p1k chr03 753 771 168929 168928 F 19 0.00 771 reject_low 35 ALIGNMENT 307 YS2-16j13.q1k chr16 47 885 846608 847449 F 839 79.74 1334 reject_low 24 ALIGNMENT 0 YS2-16j13.p1k chr04 62 439 987164 987163 F 378 0.00 771 reject_low 41 ALIGNMENT 0 YS2-16j13.p1k chr04 771 752 981166 981165 C 20 0.00 771 reject_low 31 ALIGNMENT 0 YS2-16j13.p1k chr09 771 752 246218 246217 C 20 0.00 771 reject_low 30 ALIGNMENT 0 YS2-16j13.p1k chr03 62 283 149563 149562 F 222 0.00 771 reject_low 25 ALIGNMENT 0 YS2-16j13.p1k chr08 752 771 389512 389511 F 20 0.00 771 reject_low 27 ALIGNMENT 312 YS2-16j13.q1k chr15 47 885 597015 597853 F 839 79.86 1334 reject_low 19 ALIGNMENT 0 YS2-16j13.p1k chr03 62 426 168602 168601 F 365 0.00 771 reject_low 35 ALIGNMENT 216 YS2-16j13.p1k chr01 427 751 165834 166163 F 325 91.38 771 reject_low 38 ALIGNMENT 0 YS2-16j13.p1k chr03 429 62 151839 151838 C 368 0.00 771 reject_low 40 ALIGNMENT 0 YS2-16j13.p1k chr07 62 429 568755 568754 F 368 0.00 771 reject_low 3 ALIGNMENT 0 YS2-16j13.p1k chr03 771 752 84811 84810 C 20 0.00 771 reject_low 36 ALIGNMENT 0 YS2-16j13.p1k chr03 752 771 143077 143076 F 20 0.00 771 reject_low 44 ALIGNMENT 230 YS2-16j13.q1k chr16 885 218 853512 854179 C 668 78.89 1334 reject_low 28 ALIGNMENT 0 YS2-16j13.p1k chr15 507 771 976337 976336 F 265 0.00 771 reject_low 48 ALIGNMENT 0 YS2-16j13.p1k chr08 62 415 389176 389175 F 354 0.00 771 reject_low 27 ALIGNMENT 41 YS2-16j14.q1k vc_2 903 863 2105 2145 C 41 100.00 1362 reject_low 17 ALIGNMENT 162 YS2-16j14.p1k vc_3 1286 868 1676 2105 C 419 81.15 1296 reject_low 6 ALIGNMENT 0 YS2-16j14.q1k vc_5 62 902 2398 2397 F 841 0.00 1362 reject_low 2 ALIGNMENT 124 YS2-16j14.q1k vc_4 1182 903 5511 5812 C 280 85.00 1362 reject_low 12 ALIGNMENT 162 YS2-16j14.p1k vc_1 1286 868 1676 2105 C 419 81.15 1296 reject_low 4 ALIGNMENT 26 YS2-16j14.p1k vc_3 898 868 2441 2472 C 31 96.77 1296 reject_low 24 ALIGNMENT 0 YS2-16j14.p1k vc_7 62 867 13562 13561 F 806 0.00 1296 reject_low 7 ALIGNMENT 41 YS2-16j14.q1k vc_4 863 903 5831 5871 F 41 100.00 1362 reject_low 14 ALIGNMENT 102 YS2-16j14.q1k vc_4 903 1056 6353 6512 F 154 90.26 1362|1,0 reject_low 14 ALIGNMENT 0 YS2-16j14.p1k vc_4 62 867 5871 5870 F 806 0.00 1296 reject_low 8 ALIGNMENT 36 YS2-16j14.q1k vc_5 900 865 1 36 C 36 100.00 1362 reject_low 22 ALIGNMENT 0 YS2-16j14.q1k vc_3 862 62 2513 2512 C 801 0.00 1362 reject_low 18 ALIGNMENT 0 YS2-16j14.q1k vc_5 864 62 37 36 C 803 0.00 1362 reject_low 22 ALIGNMENT 162 YS2-16j14.p1k vc_5 1286 868 4596 5025 C 419 81.15 1296 reject_low 2 ALIGNMENT 162 YS2-16j14.p1k vc_7 868 1286 100 529 F 419 82.34 1296 reject_low 3 ALIGNMENT 129 YS2-16j14.q1k vc_7 1182 903 2428 2727 C 280 85.36 1362 reject_low 3 ALIGNMENT 0 YS2-16j14.q1k vc_4 62 902 126 125 F 841 0.00 1362 reject_low 13 ALIGNMENT 38 YS2-16j14.q1k vc_7 866 903 63 100 F 38 100.00 1362 reject_low 20 ALIGNMENT 0 YS2-16j14.q1k vc_7 62 865 63 62 F 804 0.00 1362 reject_low 20 ALIGNMENT 102 YS2-16j14.q1k vc_4 903 1056 126 285 F 154 90.26 1362 reject_low 13 ALIGNMENT 129 YS2-16j14.q1k vc_1 903 1182 2531 2830 F 280 85.36 1362 reject_low 9 ALIGNMENT 0 YS2-16j14.p1k vc_3 867 62 2106 2105 C 806 0.00 1296 reject_low 6 ALIGNMENT 776 YS2-16j14.p1k chr12 38 849 157323 158134 F 812 100.00 1296 accept_chi 1 ALIGNMENT 129 YS2-16j14.q1k vc_5 903 1182 2398 2697 F 280 85.36 1362 reject_low 2 ALIGNMENT 0 YS2-16j14.p1k vc_1 867 62 2473 2472 C 806 0.00 1296 reject_low 23 ALIGNMENT 162 YS2-16j14.p1k vc_7 868 1286 13562 13991 F 419 82.34 1296 reject_low 7 ALIGNMENT 0 YS2-16j14.q1k vc_2 862 62 2146 2145 C 801 0.00 1362 reject_low 17 ALIGNMENT 39 YS2-16j14.q1k vc_5 903 865 5025 5063 C 39 100.00 1362 reject_low 19 ALIGNMENT 0 YS2-16j14.q1k vc_7 902 62 2728 2727 C 841 0.00 1362 reject_low 3 ALIGNMENT 162 YS2-16j14.p1k vc_2 1286 868 1676 2105 C 419 81.15 1296 reject_low 5 ALIGNMENT 41 YS2-16j14.q1k vc_3 903 863 2472 2512 C 41 100.00 1362 reject_low 18 ALIGNMENT 0 YS2-16j14.q1k vc_5 864 62 5064 5063 C 803 0.00 1362 reject_low 19 ALIGNMENT 0 YS2-16j14.p1k vc_5 867 62 5026 5025 C 806 0.00 1296 reject_low 2 ALIGNMENT 0 YS2-16j14.q1k vc_4 902 62 5813 5812 C 841 0.00 1362 reject_low 12 ALIGNMENT 0 YS2-16j14.p1k vc_7 62 867 100 99 F 806 0.00 1296 reject_low 3 ALIGNMENT 0 YS2-16j14.p1k vc_3 867 62 2473 2472 C 806 0.00 1296 reject_low 24 ALIGNMENT 0 YS2-16j14.q1k vc_2 62 902 2164 2163 F 841 0.00 1362 reject_low 10 ALIGNMENT 129 YS2-16j14.q1k vc_2 903 1182 2164 2463 F 280 85.36 1362 reject_low 10 ALIGNMENT 0 YS2-16j14.q1k vc_1 862 62 2513 2512 C 801 0.00 1362 reject_low 16 ALIGNMENT 26 YS2-16j14.p1k vc_1 898 868 2441 2472 C 31 96.77 1296 reject_low 23 ALIGNMENT 778 YS2-16j14.q1k chr12 862 44 157316 158134 C 819 99.76 1362 accept_chi 0 ALIGNMENT 0 YS2-16j14.q1k vc_1 62 902 2531 2530 F 841 0.00 1362 reject_low 9 ALIGNMENT 41 YS2-16j14.q1k vc_1 903 863 2472 2512 C 41 100.00 1362 reject_low 16 ALIGNMENT 0 YS2-16j14.q1k vc_4 62 862 5831 5830 F 801 0.00 1362 reject_low 14 ALIGNMENT 0 YS2-16j14.q1k vc_4 904 903 5872 6353 F 0 0.00 1362 reject_low 14 ALIGNMENT 0 YS2-16j14.q1k vc_7 62 865 13525 13524 F 804 0.00 1362 reject_low 21 ALIGNMENT 38 YS2-16j14.q1k vc_7 866 903 13525 13562 F 38 100.00 1362 reject_low 21 ALIGNMENT 0 YS2-16j14.p1k vc_2 867 62 2106 2105 C 806 0.00 1296 reject_low 5 ALIGNMENT 0 YS2-16j14.q1k vc_3 62 902 2531 2530 F 841 0.00 1362 reject_low 11 ALIGNMENT 129 YS2-16j14.q1k vc_3 903 1182 2531 2830 F 280 85.36 1362 reject_low 11 ALIGNMENT 0 YS2-16j14.p1k vc_1 867 62 2106 2105 C 806 0.00 1296 reject_low 4 ALIGNMENT 160 YS2-16j14.p1k vc_4 868 1210 5871 6219 F 343 84.84 1296 reject_low 8 ALIGNMENT 0 YS2-16j14.q1k vc_4 902 62 1535 1534 C 841 0.00 1362 reject_low 15 ALIGNMENT 69 YS2-16j14.q1k vc_4 982 903 1453 1534 C 80 96.25 1362 reject_low 15 ALIGNMENT 41 YS2-16j15.q1k vc_1 220 180 2472 2512 C 41 100.00 220 reject_low 1 ALIGNMENT 124 YS2-16j15.q1k chr04 180 41 26795 26934 C 140 99.29 220 accept 0 ALIGNMENT 41 YS2-16j15.q1k vc_2 220 180 2105 2145 C 41 100.00 220 reject_low 2 ALIGNMENT 0 YS2-16j15.q1k chr04 220 181 26796 26795 C 40 0.00 220 accept 0 ALIGNMENT 38 YS2-16j15.q1k vc_7 183 220 13525 13562 F 38 100.00 220 reject_low 6 ALIGNMENT 0 YS2-16j15.q1k vc_4 62 179 5831 5830 F 118 0.00 220 reject_low 4 ALIGNMENT 41 YS2-16j15.q1k vc_3 220 180 2472 2512 C 41 100.00 220 reject_low 3 ALIGNMENT 0 YS2-16j15.q1k vc_3 179 62 2513 2512 C 118 0.00 220 reject_low 3 ALIGNMENT 0 YS2-16j15.q1k vc_5 181 62 37 36 C 120 0.00 220 reject_low 7 ALIGNMENT 36 YS2-16j15.q1k vc_5 217 182 1 36 C 36 100.00 220 reject_low 7 ALIGNMENT 0 YS2-16j15.q1k vc_7 62 182 13525 13524 F 121 0.00 220 reject_low 6 ALIGNMENT 0 YS2-16j15.q1k vc_1 179 62 2513 2512 C 118 0.00 220 reject_low 1 ALIGNMENT 0 YS2-16j15.q1k vc_2 179 62 2146 2145 C 118 0.00 220 reject_low 2 ALIGNMENT 0 YS2-16j15.q1k vc_5 181 62 5064 5063 C 120 0.00 220 reject_low 5 ALIGNMENT 41 YS2-16j15.q1k vc_4 180 220 5831 5871 F 41 100.00 220 reject_low 4 ALIGNMENT 39 YS2-16j15.q1k vc_5 220 182 5025 5063 C 39 100.00 220 reject_low 5 ALIGNMENT 953 YS2-16j16.q1k chr15 1137 44 406554 407655 C 1094 96.62 1331 accept 0 ALIGNMENT 1010 YS2-16j16.p1k chr15 42 1197 403424 404599 F 1156 96.45 1291 accept 0 ALIGNMENT 0 YS2-16j17.q1k vc_5 257 62 37 36 C 196 0.00 296 reject_low 7 ALIGNMENT 0 YS2-16j17.q1k vc_5 257 62 5064 5063 C 196 0.00 296 reject_low 5 ALIGNMENT 221 YS2-16j17.p1k chr15 264 30 742628 742863 C 235 99.15 265 accept_chi 0 ALIGNMENT 39 YS2-16j17.q1k vc_5 296 258 5025 5063 C 39 100.00 296 reject_low 5 ALIGNMENT 41 YS2-16j17.q1k vc_1 296 256 2472 2512 C 41 100.00 296 reject_low 2 ALIGNMENT 36 YS2-16j17.q1k vc_5 293 258 1 36 C 36 100.00 296 reject_low 7 ALIGNMENT 0 YS2-16j17.q1k chr15 256 296 742859 742858 F 41 0.00 296 accept_chi 1 ALIGNMENT 0 YS2-16j17.q1k vc_1 255 62 2513 2512 C 194 0.00 296 reject_low 2 ALIGNMENT 38 YS2-16j17.q1k vc_7 259 296 13525 13562 F 38 100.00 296 reject_low 6 ALIGNMENT 0 YS2-16j17.q1k vc_4 62 255 5831 5830 F 194 0.00 296 reject_low 4 ALIGNMENT 41 YS2-16j17.q1k vc_3 296 256 2472 2512 C 41 100.00 296 reject_low 3 ALIGNMENT 41 YS2-16j17.q1k vc_4 256 296 5831 5871 F 41 100.00 296 reject_low 4 ALIGNMENT 211 YS2-16j17.q1k chr15 28 255 742630 742859 F 228 99.12 296 accept_chi 1 ALIGNMENT 0 YS2-16j17.q1k vc_7 62 258 13525 13524 F 197 0.00 296 reject_low 6 ALIGNMENT 0 YS2-16j17.q1k vc_3 255 62 2513 2512 C 194 0.00 296 reject_low 3 ALIGNMENT 997 YS2-16j18.q1k chr16 1206 41 372873 374058 C 1166 96.48 1341 accept 0 ALIGNMENT 1042 YS2-16j18.p1k chr16 50 1243 368147 369356 F 1194 96.82 1292 accept 0 ALIGNMENT 990 YS2-16j20.p1k chr13 41 1190 611391 612554 F 1150 96.17 1279 accept 0 ALIGNMENT 1000 YS2-16j20.q1k chr13 1168 48 614689 615817 C 1121 97.77 1313 accept 0 ALIGNMENT 0 YS2-16j21.p1k chr02 674 62 780380 780379 C 613 0.00 1219 reject_low 2 ALIGNMENT 20 YS2-16j21.p1k chr07 690 725 53130 53165 F 36 94.44 1219 reject_low 10 ALIGNMENT 0 YS2-16j21.p1k chr04 674 62 747546 747545 C 613 0.00 1219 reject_low 3 ALIGNMENT 0 YS2-16j21.p1k chr02 876 726 780429 780428 C 151 0.00 1219 reject_low 7 ALIGNMENT 0 YS2-16j21.p1k chr09 62 690 169457 169456 F 629 0.00 1219 reject_low 9 ALIGNMENT 0 YS2-16j21.p1k chr14 678 62 70069 70068 C 617 0.00 1219 reject_low 6 ALIGNMENT 23 YS2-16j21.p1k chr06 725 690 160559 160594 C 36 97.22 1219 reject_low 8 ALIGNMENT 28 YS2-16j21.p1k chr02 722 675 780332 780379 C 48 91.67 1219 reject_low 2 ALIGNMENT 1022 YS2-16j21.q1k chr05 40 1254 357151 358369 F 1215 96.13 1287 accept_chi 0 ALIGNMENT 0 YS2-16j21.p1k chr09 726 876 169491 169490 F 151 0.00 1219 reject_low 9 ALIGNMENT 0 YS2-16j21.p1k chr05 62 679 83151 83150 F 618 0.00 1219 reject_low 4 ALIGNMENT 23 YS2-16j21.p1k chr09 691 725 169457 169491 F 35 97.14 1219 reject_low 9 ALIGNMENT 0 YS2-16j21.p1k chr15 690 62 235411 235410 C 629 0.00 1219 reject_low 5 ALIGNMENT 0 YS2-16j21.p1k chr02 693 62 780460 780459 C 632 0.00 1219 reject_low 7 ALIGNMENT 0 YS2-16j21.p1k chr06 876 726 160560 160559 C 151 0.00 1219 reject_low 8 ALIGNMENT 0 YS2-16j21.p1k chr06 689 62 160595 160594 C 628 0.00 1219 reject_low 8 ALIGNMENT 0 YS2-16j21.p1k chr14 876 714 70035 70034 C 163 0.00 1219 reject_low 6 ALIGNMENT 26 YS2-16j21.p1k chr05 680 725 83151 83196 F 46 91.30 1219 reject_low 4 ALIGNMENT 0 YS2-16j21.p1k chr15 876 728 235375 235374 C 149 0.00 1219 reject_low 5 ALIGNMENT 0 YS2-16j21.p1k chr07 62 689 53130 53129 F 628 0.00 1219 reject_low 10 ALIGNMENT 0 YS2-16j21.p1k chr05 726 876 83196 83195 F 151 0.00 1219 reject_low 4 ALIGNMENT 0 YS2-16j21.p1k chr07 726 876 53165 53164 F 151 0.00 1219 reject_low 10 ALIGNMENT 1043 YS2-16j21.p1k chr13 1187 34 43907 45066 C 1154 97.66 1219 accept_chi 1 ALIGNMENT 24 YS2-16j21.p1k chr15 727 691 235374 235410 C 37 94.59 1219 reject_low 5 ALIGNMENT 27 YS2-16j21.p1k chr04 725 675 747495 747545 C 51 90.20 1219 reject_low 3 ALIGNMENT 0 YS2-16j21.p1k chr02 876 723 780333 780332 C 154 0.00 1219 reject_low 2 ALIGNMENT 22 YS2-16j21.p1k chr14 713 679 70034 70068 C 35 91.43 1219 reject_low 6 ALIGNMENT 0 YS2-16j21.p1k chr04 876 726 747496 747495 C 151 0.00 1219 reject_low 3 ALIGNMENT 24 YS2-16j21.p1k chr02 725 694 780428 780459 C 32 100.00 1219 reject_low 7 ALIGNMENT 995 YS2-16j22.q1k chr12 36 1227 454561 455769 F 1192 95.72 1258 accept 0 ALIGNMENT 1021 YS2-16j22.p1k chr12 1205 38 464227 465397 C 1168 96.83 1210 accept 1 ALIGNMENT 1021 YS2-16j22.p1k chr12 1205 38 455090 456260 C 1168 96.83 1210 accept 0 ALIGNMENT 995 YS2-16j22.q1k chr12 36 1227 463698 464906 F 1192 95.72 1258 accept 1 ALIGNMENT 1029 YS2-16j23.p1k chr01 41 1170 131210 132341 F 1130 97.43 1210 accept 0 ALIGNMENT 870 YS2-16j23.q1k chr01 1067 37 134518 135544 C 1031 96.02 1234 accept 0 ALIGNMENT 925 YS2-16j24.q1k chr07 1089 47 200230 201271 C 1043 97.32 1238 accept 0 ALIGNMENT 999 YS2-16j24.p1k chr07 46 1201 194971 196120 F 1156 96.54 1201 accept 0 ALIGNMENT 1023 YS2-16k02.q1k chr05 1230 33 440122 441324 C 1198 96.49 1237 accept 0 ALIGNMENT 997 YS2-16k02.p1k chr05 41 1190 439776 440931 F 1150 96.61 1338 accept 0 ALIGNMENT 1076 YS2-16k03.p1k chr12 1228 35 343213 344416 C 1194 97.74 1261 accept 0 ALIGNMENT 986 YS2-16k03.q1k chr12 41 1150 339812 340925 F 1110 96.40 1288 accept 0 ALIGNMENT 1046 YS2-16k04.p1k chr02 1252 31 656316 657546 C 1222 96.40 1252 accept 0 ALIGNMENT 1053 YS2-16k04.q1k chr02 30 1276 652131 653385 F 1247 95.91 1284 accept 0 ALIGNMENT 950 YS2-16k07.q1k chr06 39 1153 250482 251611 F 1115 95.70 1335 accept 0 ALIGNMENT 0 YS2-16k07.p1k chr07 62 124 24548 24547 F 63 0.00 1280 reject_low 1 ALIGNMENT 257 YS2-16k07.p1k chr07 125 935 24548 25361 F 811 77.93 1280 reject_low 1 ALIGNMENT 943 YS2-16k07.p1k chr06 1095 32 253440 254517 C 1064 96.43 1280 accept 0 ALIGNMENT 972 YS2-16k08.q1k chr14 41 1203 582373 583547 F 1163 95.01 1337 accept 0 ALIGNMENT 1017 YS2-16k08.p1k chr14 1200 35 585746 586921 C 1166 97.00 1334 accept 0 ALIGNMENT 0 YS2-16k09.q1k vc_5 307 62 5064 5063 C 246 0.00 346 reject_low 11 ALIGNMENT 0 YS2-16k09.q1k vc_5 307 62 37 36 C 246 0.00 346 reject_low 13 ALIGNMENT 0 YS2-16k09.q1k vc_1 305 62 2513 2512 C 244 0.00 346 reject_low 8 ALIGNMENT 383 YS2-16k09.p1k vc_7 1 606 13918 14528 F 606 88.61 638 reject_vc 7 ALIGNMENT 0 YS2-16k09.q1k chr07 306 346 657564 657563 F 41 0.00 346 accept 0 ALIGNMENT 392 YS2-16k09.p1k vc_6 1 606 3712 4322 F 606 89.11 638 reject_vc 2 ALIGNMENT 0 YS2-16k09.q1k vc_3 305 62 2513 2512 C 244 0.00 346 reject_low 9 ALIGNMENT 392 YS2-16k09.p1k vc_5 606 1 4059 4669 C 606 89.11 638 reject_vc 1 ALIGNMENT 41 YS2-16k09.q1k vc_4 306 346 5831 5871 F 41 100.00 346 reject_low 10 ALIGNMENT 383 YS2-16k09.p1k vc_7 1 606 456 1066 F 606 88.61 638 reject_vc 6 ALIGNMENT 389 YS2-16k09.p1k vc_1 606 1 1139 1749 C 606 88.94 638 reject_vc 3 ALIGNMENT 41 YS2-16k09.q1k vc_1 346 306 2472 2512 C 41 100.00 346 reject_low 8 ALIGNMENT 39 YS2-16k09.q1k vc_5 346 308 5025 5063 C 39 100.00 346 reject_low 11 ALIGNMENT 0 YS2-16k09.q1k vc_4 62 305 5831 5830 F 244 0.00 346 reject_low 10 ALIGNMENT 0 YS2-16k09.q1k vc_7 62 308 13525 13524 F 247 0.00 346 reject_low 12 ALIGNMENT 251 YS2-16k09.q1k chr07 36 305 657295 657564 F 270 99.26 346 accept 0 ALIGNMENT 36 YS2-16k09.q1k vc_5 343 308 1 36 C 36 100.00 346 reject_low 13 ALIGNMENT 41 YS2-16k09.q1k vc_3 346 306 2472 2512 C 41 100.00 346 reject_low 9 ALIGNMENT 389 YS2-16k09.p1k vc_3 606 1 1139 1749 C 606 88.94 638 reject_vc 5 ALIGNMENT 38 YS2-16k09.q1k vc_7 309 346 13525 13562 F 38 100.00 346 reject_low 12 ALIGNMENT 389 YS2-16k09.p1k vc_2 606 1 1139 1749 C 606 88.94 638 reject_vc 4 ALIGNMENT 881 YS2-16k10.q1k chr12 1105 33 460283 461386 C 1073 95.43 1328 accept 0 ALIGNMENT 992 YS2-16k10.p1k chr12 33 1153 456885 458023 F 1121 97.32 1274 accept 0 ALIGNMENT 992 YS2-16k10.p1k chr12 33 1153 466022 467160 F 1121 97.32 1274 reject_low 1 ALIGNMENT 437 YS2-16k10.q1k chr12 495 33 489754 490217 C 463 98.49 1328 reject_low 3 ALIGNMENT 722 YS2-16k10.q1k chr12 850 33 451419 452249 C 818 97.19 1328 reject_low 2 ALIGNMENT 0 YS2-16k10.q1k chr12 810 496 489755 489754 C 315 0.00 1328 reject_low 3 ALIGNMENT 0 YS2-16k13.p1k chr07 888 606 479926 479925 C 283 0.00 1398 reject_low 1 ALIGNMENT 910 YS2-16k13.p1k chr16 41 1171 485110 486241 F 1131 95.31 1398 accept 0 ALIGNMENT 993 YS2-16k13.q1k chr16 1306 40 487821 489096 C 1267 94.48 1362 accept 0 ALIGNMENT 0 YS2-16k13.p1k chr04 62 849 392136 392135 F 788 0.00 1398 reject_low 2 ALIGNMENT 23 YS2-16k13.p1k chr04 850 882 392136 392169 F 33 96.97 1398 reject_low 2 ALIGNMENT 306 YS2-16k13.p1k chr07 605 41 479925 480489 C 565 85.49 1398 reject_low 1 ALIGNMENT 922 YS2-16k14.q1k chr15 1038 38 785445 786449 C 1001 98.00 1306|3,0 accept 0 ALIGNMENT 206 YS2-16k14.p1k chr15 39 263 785157 785381 F 225 99.11 1367|0,3 accept 0 reject_low 1 ALIGNMENT 0 YS2-16k14.q1k chr15 1035 1036 785379 785447 C 0 0.00 1306 accept 0 ALIGNMENT 44 YS2-16k14.q1k chr15 1149 1033 785260 785381 C 117 82.05 1306|0,3 accept 0 ALIGNMENT 0 YS2-16k14.p1k chr15 264 885 785381 785380 F 622 0.00 1367 accept 0 ALIGNMENT 751 YS2-16k14.p1k chr15 258 1129 785445 786330 F 872 96.67 1367|3,0 reject_low 1 ALIGNMENT 0 YS2-16k14.p1k chr15 261 260 785379 785447 F 0 0.00 1367 reject_low 1 ALIGNMENT 387 YS2-16k15.q1k vc_4 409 1 5245 5654 C 409 98.53 793 reject_low 7 ALIGNMENT 387 YS2-16k15.p1k vc_2 589 1 1147 1749 C 589 89.98 591 reject_low 4 ALIGNMENT 65 YS2-16k15.q1k vc_4 238 304 1548 1614 F 67 100.00 793 reject_low 11 ALIGNMENT 90 YS2-16k15.q1k vc_7 409 305 4596 4699 C 105 96.19 793 reject_low 12 ALIGNMENT 302 YS2-16k15.q1k vc_1 1 303 2689 2991 F 303 100.00 793 reject_low 8 ALIGNMENT 0 YS2-16k15.q1k vc_4 237 62 6340 6339 C 176 0.00 793 reject_low 14 ALIGNMENT 0 YS2-16k15.q1k vc_7 304 304 4700 4921 C 1 0.00 793 reject_low 12 ALIGNMENT 302 YS2-16k15.q1k vc_3 1 303 2689 2991 F 303 100.00 793 reject_low 10 ALIGNMENT 0 YS2-16k15.q1k vc_7 53 54 5172 6360 C 0 0.00 793 reject_low 12 ALIGNMENT 0 YS2-16k15.q1k vc_4 237 62 113 112 C 176 0.00 793 reject_low 13 ALIGNMENT 302 YS2-16k15.q1k vc_2 1 303 2322 2624 F 303 100.00 793 reject_low 9 ALIGNMENT 387 YS2-16k15.p1k vc_3 589 1 1147 1749 C 589 89.98 591 reject_low 5 ALIGNMENT 51 YS2-16k15.q1k vc_7 54 3 6360 6411 C 52 100.00 793|1,0 reject_low 12 ALIGNMENT 381 YS2-16k15.p1k vc_7 1 589 13918 14520 F 589 89.64 591 reject_low 6 ALIGNMENT 157 YS2-16k15.q1k vc_4 308 646 1879 2238 F 339 83.78 793 reject_low 11 ALIGNMENT 467 YS2-16k15.q1k vc_5 1 668 2556 3248 F 668 91.02 793 reject_vc 0 ALIGNMENT 0 YS2-16k15.q1k vc_4 62 237 1548 1547 F 176 0.00 793 reject_low 11 ALIGNMENT 65 YS2-16k15.q1k vc_4 304 238 46 112 C 67 100.00 793 reject_low 13 ALIGNMENT 390 YS2-16k15.p1k vc_6 1 589 3712 4314 F 589 90.15 591 reject_low 2 ALIGNMENT 0 YS2-16k15.q1k vc_4 305 307 1615 1878 F 3 0.00 793 reject_low 11 ALIGNMENT 247 YS2-16k15.q1k vc_7 303 53 4922 5172 C 251 99.60 793|0,1 reject_low 12 ALIGNMENT 381 YS2-16k15.p1k vc_7 1 589 456 1058 F 589 89.64 591 reject_low 1 ALIGNMENT 387 YS2-16k15.p1k vc_1 589 1 1147 1749 C 589 89.98 591 reject_low 3 ALIGNMENT 390 YS2-16k15.p1k vc_5 589 1 4067 4669 C 589 90.15 591 reject_vc 0 ALIGNMENT 65 YS2-16k15.q1k vc_4 304 238 6273 6339 C 67 100.00 793 reject_low 14 ALIGNMENT 465 YS2-16k15.q1k vc_7 646 1 1903 2569 C 646 91.49 793 reject_low 1 ALIGNMENT 1042 YS2-16k16.p1k chr10 1233 37 108454 109652 C 1197 96.57 1327 accept 0 ALIGNMENT 986 YS2-16k16.q1k chr10 39 1236 104196 105402 F 1198 94.74 1378 accept 0 ALIGNMENT 119 YS2-16k17.q1k chr12 532 650 482044 482162 F 119 100.00 1319 reject_low 6 ALIGNMENT 94 YS2-16k17.q1k chr06 272 165 31622 31729 C 108 98.15 1319 reject_low 4 ALIGNMENT 0 YS2-16k17.q1k chr12 651 859 482162 482161 F 209 0.00 1319 reject_low 6 ALIGNMENT 0 YS2-16k17.q1k chr12 651 859 472582 472581 F 209 0.00 1319 reject_low 5 ALIGNMENT 0 YS2-16k17.q1k chr12 666 859 489481 489480 F 194 0.00 1319 reject_low 3 ALIGNMENT 0 YS2-16k17.q1k chr12 62 531 485696 485695 F 470 0.00 1319 reject_low 7 ALIGNMENT 128 YS2-16k17.q1k chr12 532 665 489348 489481 F 134 98.51 1319 reject_low 3 ALIGNMENT 0 YS2-16k17.q1k chr12 62 531 489348 489347 F 470 0.00 1319 reject_low 3 ALIGNMENT 119 YS2-16k17.q1k chr12 532 650 472464 472582 F 119 100.00 1319 reject_low 5 ALIGNMENT 0 YS2-16k17.q1k chr12 651 859 485814 485813 F 209 0.00 1319 reject_low 7 ALIGNMENT 1047 YS2-16k17.p1k chr12 1282 31 453351 454590 C 1252 95.37 1306 reject_low 1 ALIGNMENT 0 YS2-16k17.q1k chr06 859 273 31623 31622 C 587 0.00 1319 reject_low 4 ALIGNMENT 0 YS2-16k17.q1k chr12 651 859 468930 468929 F 209 0.00 1319 reject_low 2 ALIGNMENT 842 YS2-16k17.q1k chr12 46 1045 459187 460200 F 1000 96.20 1319 accept 0 ALIGNMENT 0 YS2-16k17.q1k chr06 164 62 31730 31729 C 103 0.00 1319 reject_low 4 ALIGNMENT 119 YS2-16k17.q1k chr12 532 650 485696 485814 F 119 100.00 1319 reject_low 7 ALIGNMENT 0 YS2-16k17.q1k chr12 62 531 482044 482043 F 470 0.00 1319 reject_low 6 ALIGNMENT 1047 YS2-16k17.p1k chr12 1282 31 462488 463727 C 1252 95.37 1306 accept 0 ALIGNMENT 573 YS2-16k17.q1k chr12 46 650 468324 468930 F 605 99.34 1319 reject_low 2 ALIGNMENT 0 YS2-16k17.q1k chr12 62 531 472464 472463 F 470 0.00 1319 reject_low 5 ALIGNMENT 0 YS2-16k18.q1k vc_3 724 62 2513 2512 C 663 0.00 765 reject_low 3 ALIGNMENT 628 YS2-16k18.q1k chr05 32 726 504032 504728 F 695 97.41 765 accept_chi 1 ALIGNMENT 36 YS2-16k18.q1k vc_5 762 727 1 36 C 36 100.00 765 reject_low 7 ALIGNMENT 0 YS2-16k18.q1k vc_1 724 62 2513 2512 C 663 0.00 765 reject_low 2 ALIGNMENT 41 YS2-16k18.q1k vc_1 765 725 2472 2512 C 41 100.00 765 reject_low 2 ALIGNMENT 0 YS2-16k18.q1k vc_4 62 724 5831 5830 F 663 0.00 765 reject_low 4 ALIGNMENT 0 YS2-16k18.p1k chr05 747 730 504031 504030 C 18 0.00 747 accept_chi 0 ALIGNMENT 38 YS2-16k18.q1k vc_7 728 765 13525 13562 F 38 100.00 765 reject_low 6 ALIGNMENT 0 YS2-16k18.q1k vc_5 726 62 5064 5063 C 665 0.00 765 reject_low 5 ALIGNMENT 643 YS2-16k18.p1k chr05 729 32 504030 504728 C 698 97.85 747 accept_chi 0 ALIGNMENT 41 YS2-16k18.q1k vc_3 765 725 2472 2512 C 41 100.00 765 reject_low 3 ALIGNMENT 0 YS2-16k18.q1k vc_5 726 62 37 36 C 665 0.00 765 reject_low 7 ALIGNMENT 41 YS2-16k18.q1k vc_4 725 765 5831 5871 F 41 100.00 765 reject_low 4 ALIGNMENT 0 YS2-16k18.q1k vc_7 62 727 13525 13524 F 666 0.00 765 reject_low 6 ALIGNMENT 39 YS2-16k18.q1k vc_5 765 727 5025 5063 C 39 100.00 765 reject_low 5 ALIGNMENT 0 YS2-16k18.q1k chr05 727 765 504728 504727 F 39 0.00 765 accept_chi 1 ALIGNMENT 1006 YS2-16k19.p1k chr07 1244 34 220196 221418 C 1211 95.71 1244 accept 0 ALIGNMENT 860 YS2-16k19.q1k chr07 42 994 219993 220959 F 953 98.11 1251 accept 0 ALIGNMENT 995 YS2-16k20.q1k chr13 1197 51 391268 392429 C 1147 96.86 1305 accept 0 ALIGNMENT 943 YS2-16k20.p1k chr13 43 1195 386595 387728 F 1153 95.32 1299 accept 0 ALIGNMENT 0 YS2-16k21.q1k chr15 233 870 173231 173230 F 638 0.00 1285 reject_low 1 ALIGNMENT 1047 YS2-16k21.p1k chr13 39 1207 117736 118903 F 1169 97.43 1231 accept 0 ALIGNMENT 188 YS2-16k21.q1k chr15 36 232 173035 173231 F 197 99.49 1285 reject_low 1 ALIGNMENT 0 YS2-16k21.q1k chr13 231 62 120393 120392 C 170 0.00 1285 accept 0 ALIGNMENT 827 YS2-16k21.q1k chr13 1238 232 119380 120392 C 1007 94.94 1285 accept 0 ALIGNMENT 313 YS2-16k22.p1k chr12 32 354 356563 356885 F 323 99.69 361 accept_chi 0 ALIGNMENT 0 YS2-16k22.q1k vc_4 62 351 5831 5830 F 290 0.00 392 reject_low 4 ALIGNMENT 0 YS2-16k22.q1k chr12 392 353 356564 356563 C 40 0.00 392 accept_chi 1 ALIGNMENT 0 YS2-16k22.q1k vc_5 353 62 5064 5063 C 292 0.00 392 reject_low 5 ALIGNMENT 0 YS2-16k22.q1k vc_5 353 62 37 36 C 292 0.00 392 reject_low 7 ALIGNMENT 0 YS2-16k22.q1k vc_1 351 62 2513 2512 C 290 0.00 392 reject_low 2 ALIGNMENT 41 YS2-16k22.q1k vc_4 352 392 5831 5871 F 41 100.00 392 reject_low 4 ALIGNMENT 41 YS2-16k22.q1k vc_3 392 352 2472 2512 C 41 100.00 392 reject_low 3 ALIGNMENT 0 YS2-16k22.q1k vc_7 62 354 13525 13524 F 293 0.00 392 reject_low 6 ALIGNMENT 0 YS2-16k22.q1k vc_3 351 62 2513 2512 C 290 0.00 392 reject_low 3 ALIGNMENT 36 YS2-16k22.q1k vc_5 389 354 1 36 C 36 100.00 392 reject_low 7 ALIGNMENT 38 YS2-16k22.q1k vc_7 355 392 13525 13562 F 38 100.00 392 reject_low 6 ALIGNMENT 41 YS2-16k22.q1k vc_1 392 352 2472 2512 C 41 100.00 392 reject_low 2 ALIGNMENT 309 YS2-16k22.q1k chr12 352 33 356563 356882 C 320 99.69 392 accept_chi 1 ALIGNMENT 39 YS2-16k22.q1k vc_5 392 354 5025 5063 C 39 100.00 392 reject_low 5 ALIGNMENT 99 YS2-16k23.q1k chr02 142 36 110564 110670 C 107 99.07 1263 reject_low 1 ALIGNMENT 0 YS2-16k23.q1k chr02 830 143 110565 110564 C 688 0.00 1263 reject_low 1 ALIGNMENT 964 YS2-16k23.p1k chr14 37 1076 693199 694239 F 1040 97.98 1196 accept 0 ALIGNMENT 889 YS2-16k23.q1k chr14 1263 142 693416 694550 C 1122 93.76 1263 accept 0 ALIGNMENT 0 YS2-16k23.q1k chr14 141 62 694551 694550 C 80 0.00 1263 accept 0 ALIGNMENT 977 YS2-16l03.p1k chr13 32 1236 779238 780453 F 1205 95.52 1255 accept 0 ALIGNMENT 1006 YS2-16l03.q1k chr13 1260 31 780160 781402 C 1230 95.20 1286 accept 0 ALIGNMENT 0 YS2-16l04.q1k vc_1 62 1175 2531 2530 F 1114 0.00 1309 reject_low 2 ALIGNMENT 0 YS2-16l04.q1k vc_1 1133 62 2513 2512 C 1072 0.00 1309 reject_low 5 ALIGNMENT 38 YS2-16l04.q1k vc_5 1176 1241 2398 2463 F 66 86.36 1309 reject_low 3 ALIGNMENT 20 YS2-16l04.q1k vc_5 1176 1140 5025 5060 C 37 89.19 1309 reject_low 6 ALIGNMENT 1022 YS2-16l04.q1k chr03 40 1128 266481 267570 F 1089 98.62 1309 accept_chi 0 ALIGNMENT 0 YS2-16l04.q1k vc_5 1139 62 5061 5060 C 1078 0.00 1309 reject_low 6 ALIGNMENT 0 YS2-16l04.q1k vc_5 62 1175 2398 2397 F 1114 0.00 1309 reject_low 3 ALIGNMENT 20 YS2-16l04.q1k vc_5 1168 1140 5 33 C 29 93.10 1309 reject_low 7 ALIGNMENT 38 YS2-16l04.q1k vc_7 1241 1176 2662 2727 C 66 87.88 1309 reject_low 4 ALIGNMENT 20 YS2-16l04.q1k vc_1 1176 1134 2472 2512 C 43 88.37 1309 reject_low 5 ALIGNMENT 965 YS2-16l04.p1k chr03 1123 39 266481 267569 C 1085 97.24 1249 accept_chi 1 ALIGNMENT 0 YS2-16l04.q1k vc_5 1139 62 34 33 C 1078 0.00 1309 reject_low 7 ALIGNMENT 38 YS2-16l04.q1k vc_1 1176 1241 2531 2596 F 66 86.36 1309 reject_low 2 ALIGNMENT 0 YS2-16l04.q1k vc_7 1175 62 2728 2727 C 1114 0.00 1309 reject_low 4 ALIGNMENT 1029 YS2-16l05.q1k chr11 34 1203 592745 593918 F 1170 96.67 1287 accept 0 ALIGNMENT 970 YS2-16l05.p1k chr11 1165 33 597295 598440 C 1133 96.38 1289 accept 0 ALIGNMENT 948 YS2-16l06.p1k chr12 1140 50 454809 455906 C 1091 96.52 1307 reject_low 2 ALIGNMENT 978 YS2-16l06.p1k chr12 1295 50 463794 465043 C 1246 93.98 1307 accept 0,1 ALIGNMENT 1071 YS2-16l06.q1k chr12 40 1243 454292 455504 F 1204 96.93 1292 accept 0 ALIGNMENT 1071 YS2-16l06.q1k chr12 40 1243 463429 464641 F 1204 96.93 1292 accept 1 ALIGNMENT 967 YS2-16l12.p1k chr10 1131 34 398829 399937 C 1098 97.09 1283 accept 0 ALIGNMENT 1019 YS2-16l12.q1k chr10 41 1171 398742 399880 F 1131 97.61 1331 accept 0 ALIGNMENT 41 YS2-16l13.q1k vc_2 336 296 2105 2145 C 41 100.00 336 reject_low 3 ALIGNMENT 0 YS2-16l13.q1k vc_4 62 295 5831 5830 F 234 0.00 336 reject_low 5 ALIGNMENT 36 YS2-16l13.q1k vc_5 333 298 1 36 C 36 100.00 336 reject_low 8 ALIGNMENT 0 YS2-16l13.q1k vc_7 62 298 13525 13524 F 237 0.00 336 reject_low 7 ALIGNMENT 0 YS2-16l13.q1k vc_1 295 62 2513 2512 C 234 0.00 336 reject_low 2 ALIGNMENT 41 YS2-16l13.q1k vc_1 336 296 2472 2512 C 41 100.00 336 reject_low 2 ALIGNMENT 243 YS2-16l13.p1k chr07 283 36 461013 461260 C 248 99.60 302 accept_chi 1 ALIGNMENT 0 YS2-16l13.q1k chr07 306 336 461278 461277 F 31 0.00 336 accept_chi 0 ALIGNMENT 252 YS2-16l13.q1k chr07 40 305 461013 461278 F 266 98.50 336 accept_chi 0 ALIGNMENT 0 YS2-16l13.p1k chr07 302 284 461014 461013 C 19 0.00 302 accept_chi 1 ALIGNMENT 0 YS2-16l13.q1k vc_2 295 62 2146 2145 C 234 0.00 336 reject_low 3 ALIGNMENT 0 YS2-16l13.q1k vc_5 297 62 5064 5063 C 236 0.00 336 reject_low 6 ALIGNMENT 39 YS2-16l13.q1k vc_5 336 298 5025 5063 C 39 100.00 336 reject_low 6 ALIGNMENT 0 YS2-16l13.q1k vc_3 295 62 2513 2512 C 234 0.00 336 reject_low 4 ALIGNMENT 41 YS2-16l13.q1k vc_4 296 336 5831 5871 F 41 100.00 336 reject_low 5 ALIGNMENT 41 YS2-16l13.q1k vc_3 336 296 2472 2512 C 41 100.00 336 reject_low 4 ALIGNMENT 0 YS2-16l13.q1k vc_5 297 62 37 36 C 236 0.00 336 reject_low 8 ALIGNMENT 38 YS2-16l13.q1k vc_7 299 336 13525 13562 F 38 100.00 336 reject_low 7 ALIGNMENT 0 YS2-16l14.q1k vc_5 297 62 37 36 C 236 0.00 336 reject_low 8 ALIGNMENT 39 YS2-16l14.q1k vc_5 336 298 5025 5063 C 39 100.00 336 reject_low 6 ALIGNMENT 0 YS2-16l14.q1k chr07 306 336 461278 461277 F 31 0.00 336 accept_chi 1 ALIGNMENT 0 YS2-16l14.q1k vc_1 295 62 2513 2512 C 234 0.00 336 reject_low 2 ALIGNMENT 252 YS2-16l14.q1k chr07 40 305 461013 461278 F 266 98.50 336 accept_chi 1 ALIGNMENT 41 YS2-16l14.q1k vc_3 336 296 2472 2512 C 41 100.00 336 reject_low 4 ALIGNMENT 0 YS2-16l14.p1k chr07 300 282 461014 461013 C 19 0.00 300 accept_chi 0 ALIGNMENT 41 YS2-16l14.q1k vc_4 296 336 5831 5871 F 41 100.00 336 reject_low 5 ALIGNMENT 0 YS2-16l14.q1k vc_2 295 62 2146 2145 C 234 0.00 336 reject_low 3 ALIGNMENT 38 YS2-16l14.q1k vc_7 299 336 13525 13562 F 38 100.00 336 reject_low 7 ALIGNMENT 246 YS2-16l14.p1k chr07 281 27 461013 461268 C 255 99.22 300 accept_chi 0 ALIGNMENT 0 YS2-16l14.q1k vc_5 297 62 5064 5063 C 236 0.00 336 reject_low 6 ALIGNMENT 36 YS2-16l14.q1k vc_5 333 298 1 36 C 36 100.00 336 reject_low 8 ALIGNMENT 41 YS2-16l14.q1k vc_1 336 296 2472 2512 C 41 100.00 336 reject_low 2 ALIGNMENT 0 YS2-16l14.q1k vc_3 295 62 2513 2512 C 234 0.00 336 reject_low 4 ALIGNMENT 0 YS2-16l14.q1k vc_4 62 295 5831 5830 F 234 0.00 336 reject_low 5 ALIGNMENT 0 YS2-16l14.q1k vc_7 62 298 13525 13524 F 237 0.00 336 reject_low 7 ALIGNMENT 41 YS2-16l14.q1k vc_2 336 296 2105 2145 C 41 100.00 336 reject_low 3 ALIGNMENT 1064 YS2-16l15.p1k chr07 1285 34 269839 271103 C 1252 96.25 1315 accept 0 ALIGNMENT 0 YS2-16l15.p1k chr02 806 62 353648 353647 C 745 0.00 1315 reject_low 2 ALIGNMENT 30 YS2-16l15.p1k chr02 861 807 353594 353647 C 55 92.73 1315 reject_low 2 ALIGNMENT 1006 YS2-16l15.q1k chr07 29 1180 268995 270151 F 1152 96.44 1344 accept 0 ALIGNMENT 0 YS2-16l15.p1k chr04 805 62 226878 226877 C 744 0.00 1315 reject_low 1 ALIGNMENT 32 YS2-16l15.p1k chr04 863 806 226821 226877 C 58 93.10 1315 reject_low 1 ALIGNMENT 1038 YS2-16l17.p1k chr10 1242 32 568658 569879 C 1211 95.38 1301 accept 0 ALIGNMENT 957 YS2-16l17.q1k chr10 33 1148 564997 566119 F 1116 95.97 1331 accept 0 ALIGNMENT 0 YS2-16l18.p1k chr01 62 597 113287 113286 F 536 0.00 1309 reject_low 2 ALIGNMENT 0 YS2-16l18.p1k chr10 62 591 150064 150063 F 530 0.00 1309 reject_low 1 ALIGNMENT 0 YS2-16l18.p1k chr10 627 881 150098 150097 F 255 0.00 1309 reject_low 1 ALIGNMENT 20 YS2-16l18.p1k chr07 629 605 988900 988924 C 25 100.00 1309 reject_low 6 ALIGNMENT 21 YS2-16l18.p1k chr07 632 607 379166 379191 C 26 100.00 1309 reject_low 5 ALIGNMENT 0 YS2-16l18.p1k chr14 881 633 70029 70028 C 249 0.00 1309 reject_low 4 ALIGNMENT 23 YS2-16l18.p1k chr14 632 604 70028 70056 C 29 100.00 1309 reject_low 4 ALIGNMENT 22 YS2-16l18.p1k chr02 633 606 780439 780466 C 28 100.00 1309 reject_low 3 ALIGNMENT 0 YS2-16l18.p1k chr13 881 631 514629 514628 C 251 0.00 1309 reject_low 7 ALIGNMENT 0 YS2-16l18.p1k chr13 605 62 514653 514652 C 544 0.00 1309 reject_low 7 ALIGNMENT 20 YS2-16l18.p1k chr01 598 630 113287 113319 F 33 93.94 1309 reject_low 2 ALIGNMENT 0 YS2-16l18.p1k chr07 881 630 988901 988900 C 252 0.00 1309 reject_low 6 ALIGNMENT 0 YS2-16l18.p1k chr01 631 881 113319 113318 F 251 0.00 1309 reject_low 2 ALIGNMENT 932 YS2-16l18.p1k chr11 45 1217 522742 523901 F 1173 94.20 1309 accept 0 ALIGNMENT 0 YS2-16l18.p1k chr07 881 633 379167 379166 C 249 0.00 1309 reject_low 5 ALIGNMENT 0 YS2-16l18.p1k chr07 606 62 379192 379191 C 545 0.00 1309 reject_low 5 ALIGNMENT 0 YS2-16l18.p1k chr14 603 62 70057 70056 C 542 0.00 1309 reject_low 4 ALIGNMENT 20 YS2-16l18.p1k chr13 630 606 514628 514652 C 25 100.00 1309 reject_low 7 ALIGNMENT 21 YS2-16l18.p1k chr10 592 626 150064 150098 F 35 94.29 1309 reject_low 1 ALIGNMENT 0 YS2-16l18.p1k chr07 604 62 988925 988924 C 543 0.00 1309 reject_low 6 ALIGNMENT 1027 YS2-16l18.q1k chr11 1222 45 527023 528212 C 1178 96.10 1324 accept 0 ALIGNMENT 0 YS2-16l18.p1k chr02 881 634 780440 780439 C 248 0.00 1309 reject_low 3 ALIGNMENT 0 YS2-16l18.p1k chr02 605 62 780467 780466 C 544 0.00 1309 reject_low 3 ALIGNMENT 28 YS2-16l19.q1k chr03 219 283 514 578 F 65 86.15 900 ambiguous_tel 23 ALIGNMENT 137 YS2-16l19.p1k chr12 1238 998 490307 490543 C 241 87.55 1269 reject_low 2 ALIGNMENT 123 YS2-16l19.q1k chr02 404 212 812795 812987 C 193 91.71 900 ambiguous_tel 8 ALIGNMENT 108 YS2-16l19.q1k chr01 234 438 215 419 F 205 88.29 900 ambiguous_tel 12 ALIGNMENT 1047 YS2-16l19.p1k chr12 1238 36 452339 453537 C 1203 96.26 1269 accept 0 ALIGNMENT 0 YS2-16l19.p1k chr12 997 62 490544 490543 C 936 0.00 1269 reject_low 2 ALIGNMENT 65 YS2-16l19.q1k chr04 437 212 1524990 1525208 C 226 82.30 900 ambiguous_tel 22 ALIGNMENT 0 YS2-16l19.q1k chr03 284 285 579 569 F 2 0.00 900 ambiguous_tel 23 ALIGNMENT 93 YS2-16l19.q1k chr06 226 386 4937 5097 F 161 89.44 900 ambiguous_tel 20 ALIGNMENT 113 YS2-16l19.q1k chr15 389 214 1084331 1084506 C 176 91.48 900 ambiguous_tel 13 ALIGNMENT 135 YS2-16l19.q1k chr05 437 219 569973 570192 C 219 90.87 900 ambiguous_tel 5 ALIGNMENT 130 YS2-16l19.q1k chr14 447 212 783651 783884 C 236 88.56 900 ambiguous_tel 4 ALIGNMENT 173 YS2-16l19.q1k chr03 447 212 316147 316379 C 236 94.49 900 ambiguous_tel 3 ALIGNMENT 1047 YS2-16l19.p1k chr12 1238 36 461476 462674 C 1203 96.26 1269 accept 1 ALIGNMENT 85 YS2-16l19.q1k chr03 286 428 570 712 F 143 90.21 900 ambiguous_tel 23 ALIGNMENT 120 YS2-16l19.q1k chr09 441 219 439444 439668 C 223 87.89 900 ambiguous_tel 6 ALIGNMENT 110 YS2-16l19.q1k chr08 407 214 556525 556717 C 194 89.69 900 ambiguous_tel 15 ALIGNMENT 93 YS2-16l19.q1k chr11 219 437 209 434 F 219 84.93 900 ambiguous_tel 17 ALIGNMENT 117 YS2-16l19.q1k chr07 214 428 177 390 F 215 89.30 900 ambiguous_tel 11 ALIGNMENT 93 YS2-16l19.q1k chr11 428 215 665930 666140 C 214 85.98 900 ambiguous_tel 18 ALIGNMENT 80 YS2-16l19.q1k chr12 212 437 11493 11708 F 226 84.07 900 ambiguous_tel 21 ALIGNMENT 124 YS2-16l19.q1k chr10 437 214 745194 745418 C 224 89.29 900 ambiguous_tel 7 ALIGNMENT 123 YS2-16l19.q1k chr13 212 404 5730 5922 F 193 91.71 900 ambiguous_tel 10 ALIGNMENT 91 YS2-16l19.q1k chr12 437 219 1064660 1064882 C 219 84.47 900 ambiguous_tel 19 ALIGNMENT 113 YS2-16l19.q1k chr16 214 389 6635 6810 F 176 91.48 900 ambiguous_tel 14 ALIGNMENT 95 YS2-16l19.q1k chr13 437 230 923916 924130 C 208 86.06 900 ambiguous_tel 16 ALIGNMENT 123 YS2-16l19.q1k chr04 212 404 290 482 F 193 91.71 900 ambiguous_tel 9 ALIGNMENT 39 YS2-16l20.q1k vc_5 490 452 5025 5063 C 39 100.00 490 reject_low 5 ALIGNMENT 41 YS2-16l20.q1k vc_1 490 450 2472 2512 C 41 100.00 490 reject_low 2 ALIGNMENT 0 YS2-16l20.q1k vc_5 451 62 5064 5063 C 390 0.00 490 reject_low 5 ALIGNMENT 0 YS2-16l20.q1k vc_5 451 62 37 36 C 390 0.00 490 reject_low 7 ALIGNMENT 400 YS2-16l20.p1k chr10 33 454 177189 177610 F 422 99.29 472 accept_chi 0 ALIGNMENT 0 YS2-16l20.p1k chr10 455 472 177610 177609 F 18 0.00 472 accept_chi 0 ALIGNMENT 0 YS2-16l20.q1k vc_1 449 62 2513 2512 C 388 0.00 490 reject_low 2 ALIGNMENT 0 YS2-16l20.q1k chr10 490 450 177190 177189 C 41 0.00 490 accept_chi 1 ALIGNMENT 36 YS2-16l20.q1k vc_5 487 452 1 36 C 36 100.00 490 reject_low 7 ALIGNMENT 0 YS2-16l20.q1k vc_3 449 62 2513 2512 C 388 0.00 490 reject_low 3 ALIGNMENT 41 YS2-16l20.q1k vc_4 450 490 5831 5871 F 41 100.00 490 reject_low 4 ALIGNMENT 38 YS2-16l20.q1k vc_7 453 490 13525 13562 F 38 100.00 490 reject_low 6 ALIGNMENT 41 YS2-16l20.q1k vc_3 490 450 2472 2512 C 41 100.00 490 reject_low 3 ALIGNMENT 0 YS2-16l20.q1k vc_4 62 449 5831 5830 F 388 0.00 490 reject_low 4 ALIGNMENT 0 YS2-16l20.q1k vc_7 62 452 13525 13524 F 391 0.00 490 reject_low 6 ALIGNMENT 395 YS2-16l20.q1k chr10 449 29 177189 177610 C 421 99.05 490 accept_chi 1 ALIGNMENT 29 YS2-16l21.q1k chr16 316 403 650473 650560 F 88 87.50 1251 reject_low 1 ALIGNMENT 0 YS2-16l21.q1k chr16 404 840 650560 650559 F 437 0.00 1251 reject_low 1 ALIGNMENT 22 YS2-16l21.q1k chr05 405 291 142894 143008 C 115 80.87 1251 reject_low 2 ALIGNMENT 0 YS2-16l21.q1k chr05 62 365 81192 81191 F 304 0.00 1251 reject_low 3 ALIGNMENT 833 YS2-16l21.q1k chr09 41 1100 136813 137877 F 1060 95.19 1251 accept 0 ALIGNMENT 0 YS2-16l21.q1k chr05 290 62 143009 143008 C 229 0.00 1251 reject_low 2 ALIGNMENT 0 YS2-16l21.q1k chr16 62 315 650473 650472 F 254 0.00 1251 reject_low 1 ALIGNMENT 1032 YS2-16l21.p1k chr09 1230 46 140740 141927 C 1185 96.71 1235 accept 0 ALIGNMENT 0 YS2-16l21.q1k chr05 430 840 81255 81254 F 411 0.00 1251 reject_low 3 ALIGNMENT 0 YS2-16l21.q1k chr05 840 406 142895 142894 C 435 0.00 1251 reject_low 2 ALIGNMENT 21 YS2-16l21.q1k chr05 366 429 81192 81255 F 64 87.50 1251 reject_low 3 ALIGNMENT 1017 YS2-16l23.q1k chr10 1255 37 175884 177112 C 1219 95.41 1268 accept 0 ALIGNMENT 984 YS2-16l23.p1k chr10 38 1191 172794 173944 F 1154 96.45 1196 accept 0 ALIGNMENT 40 YS2-16l24.q1k vc_1 427 388 2472 2511 C 40 100.00 427 reject_low 2 ALIGNMENT 38 YS2-16l24.q1k vc_7 390 427 13525 13562 F 38 100.00 427 reject_low 4 ALIGNMENT 329 YS2-16l24.p1k chr04 406 60 840209 840557 C 347 99.42 425 accept_chi 0 ALIGNMENT 0 YS2-16l24.q1k vc_1 387 62 2512 2511 C 326 0.00 427 reject_low 2 ALIGNMENT 40 YS2-16l24.q1k vc_4 388 427 5832 5871 F 40 100.00 427 reject_low 3 ALIGNMENT 0 YS2-16l24.q1k vc_7 62 389 13525 13524 F 328 0.00 427 reject_low 4 ALIGNMENT 328 YS2-16l24.q1k chr04 42 387 840210 840557 F 346 99.42 427 accept_chi 1 ALIGNMENT 0 YS2-16l24.p1k chr04 425 407 840210 840209 C 19 0.00 425 accept_chi 0 ALIGNMENT 0 YS2-16l24.q1k vc_4 62 387 5832 5831 F 326 0.00 427 reject_low 3 ALIGNMENT 0 YS2-16l24.q1k chr04 388 427 840557 840556 F 40 0.00 427 accept_chi 1 ALIGNMENT 905 YS2-16m01.p1k chr12 35 1054 227757 228793 F 1020 97.65 1183 accept 0 ALIGNMENT 1021 YS2-16m01.q1k chr12 1228 41 230446 231637 C 1188 96.80 1237 accept 0 ALIGNMENT 945 YS2-16m03.q1k chr02 1223 42 119179 120362 C 1182 95.60 1286 accept 0 ALIGNMENT 1037 YS2-16m03.p1k chr02 32 1241 116318 117532 F 1210 95.79 1265 accept 0 ALIGNMENT 1001 YS2-16m04.p1k chr07 1249 34 720454 721681 C 1216 95.81 1252 accept_chi 0 ALIGNMENT 881 YS2-16m04.q1k chr16 1082 30 116126 117192 C 1053 95.73 1213 accept_chi 1 ALIGNMENT 955 YS2-16m05.q1k chr16 40 1101 181459 182525 F 1062 97.36 1267 accept 0 ALIGNMENT 1032 YS2-16m05.p1k chr16 1275 34 184026 185272 C 1242 95.89 1297 accept 0 ALIGNMENT 641 YS2-16m06.q1k chr07 404 1262 895 1758 F 859 93.48 1315 reject_bad_break 0 ALIGNMENT 0 YS2-16m06.q1k chr16 339 936 7304 7303 F 598 0.00 1315 reject_low 8 ALIGNMENT 191 YS2-16m06.q1k chr12 41 338 11871 12166 F 298 90.60 1315 reject_low 6 ALIGNMENT 188 YS2-16m06.q1k chr15 338 44 1083837 1084129 C 295 90.51 1315 reject_low 7 ALIGNMENT 343 YS2-16m06.q1k chr03 43 588 886 1429 F 546 89.74 1315 reject_low 1 ALIGNMENT 0 YS2-16m06.q1k chr07 936 310 1083591 1083590 C 627 0.00 1315 reject_low 20 ALIGNMENT 0 YS2-16m06.q1k chr03 589 936 1429 1428 F 348 0.00 1315 reject_low 1 ALIGNMENT 160 YS2-16m06.q1k chr03 338 589 4072 4323 F 252 90.08 1315 reject_low 2 ALIGNMENT 0 YS2-16m06.q1k chr14 309 936 7478 7477 F 628 0.00 1315 reject_low 17 ALIGNMENT 188 YS2-16m06.q1k chr16 44 338 7012 7304 F 295 90.51 1315 reject_low 8 ALIGNMENT 116 YS2-16m06.q1k chr07 309 44 1083590 1083851 C 266 84.59 1315 reject_low 20 ALIGNMENT 0 YS2-16m06.q1k chr03 936 339 315699 315698 C 598 0.00 1315 reject_low 12 ALIGNMENT 0 YS2-16m06.q1k chr15 936 339 1083838 1083837 C 598 0.00 1315 reject_low 7 ALIGNMENT 197 YS2-16m06.q1k chr05 588 339 566695 566945 C 250 94.80 1315 reject_low 3 ALIGNMENT 180 YS2-16m06.q1k chr09 309 41 439013 439279 C 269 91.82 1315 reject_low 9 ALIGNMENT 0 YS2-16m06.q1k chr11 936 253 665548 665547 C 684 0.00 1315 reject_low 18 ALIGNMENT 0 YS2-16m06.q1k chr07 381 403 905 894 F 23 0.00 1315 reject_bad_break 0 ALIGNMENT 0 YS2-16m06.q1k chr14 936 339 783198 783197 C 598 0.00 1315 reject_low 5 ALIGNMENT 0 YS2-16m06.q1k chr05 587 936 569017 569016 F 350 0.00 1315 reject_low 15 ALIGNMENT 0 YS2-16m06.q1k chr10 936 310 744768 744767 C 627 0.00 1315 reject_low 19 ALIGNMENT 135 YS2-16m06.q1k chr11 339 589 665068 665307 F 251 88.05 1315 reject_low 4 ALIGNMENT 0 YS2-16m06.q1k chr05 936 589 566696 566695 C 348 0.00 1315 reject_low 3 ALIGNMENT 197 YS2-16m06.q1k chr14 338 44 783197 783489 C 295 91.53 1315 reject_low 5 ALIGNMENT 0 YS2-16m06.q1k chr11 62 338 665068 665067 F 277 0.00 1315 reject_low 4 ALIGNMENT 0 YS2-16m06.q1k chr09 339 936 7865 7864 F 598 0.00 1315 reject_low 13 ALIGNMENT 0 YS2-16m06.q1k chr05 62 415 568848 568847 F 354 0.00 1315 reject_low 15 ALIGNMENT 0 YS2-16m06.q1k chr11 590 936 665307 665306 F 347 0.00 1315 reject_low 4 ALIGNMENT 0 YS2-16m06.q1k chr08 309 936 5554 5553 F 628 0.00 1315 reject_low 16 ALIGNMENT 0 YS2-16m06.q1k chr03 62 337 4072 4071 F 276 0.00 1315 reject_low 2 ALIGNMENT 0 YS2-16m06.q1k chr02 339 936 6688 6687 F 598 0.00 1315 reject_low 11 ALIGNMENT 126 YS2-16m06.q1k chr10 309 44 744767 745028 C 266 85.71 1315 reject_low 19 ALIGNMENT 161 YS2-16m06.q1k chr03 338 41 315698 315993 C 298 87.25 1315 reject_low 12 ALIGNMENT 0 YS2-16m06.q1k chr05 338 339 566946 569514 C 0 0.00 1315 reject_low 3 ALIGNMENT 161 YS2-16m06.q1k chr10 41 338 7553 7848 F 298 87.25 1315 reject_low 14 ALIGNMENT 0 YS2-16m06.q1k chr10 339 936 7848 7847 F 598 0.00 1315 reject_low 14 ALIGNMENT 140 YS2-16m06.q1k chr08 43 308 5292 5554 F 266 87.22 1315 reject_low 16 ALIGNMENT 0 YS2-16m06.q1k chr04 936 339 1524528 1524527 C 598 0.00 1315 reject_low 10 ALIGNMENT 165 YS2-16m06.q1k chr02 44 338 6397 6688 F 295 88.14 1315 reject_low 11 ALIGNMENT 267 YS2-16m06.q1k chr07 41 380 567 904 F 340 95.00 1315 reject_bad_break 0 ALIGNMENT 0 YS2-16m06.q1k chr03 590 936 4323 4322 F 347 0.00 1315 reject_low 2 ALIGNMENT 989 YS2-16m06.p1k chr07 1166 32 4739 5874 C 1135 96.56 1278 reject_bad_break 0 ALIGNMENT 104 YS2-16m06.q1k chr08 221 41 556141 556319 C 181 88.95 1315 reject_low 21 ALIGNMENT 0 YS2-16m06.q1k chr09 936 310 439014 439013 C 627 0.00 1315 reject_low 9 ALIGNMENT 130 YS2-16m06.q1k chr11 252 44 665547 665753 C 209 90.91 1315 reject_low 18 ALIGNMENT 0 YS2-16m06.q1k chr08 936 222 556142 556141 C 715 0.00 1315 reject_low 21 ALIGNMENT 58 YS2-16m06.q1k chr05 416 586 568848 569017 F 171 80.70 1315 reject_low 15 ALIGNMENT 0 YS2-16m06.q1k chr12 339 936 12166 12165 F 598 0.00 1315 reject_low 6 ALIGNMENT 168 YS2-16m06.q1k chr04 338 43 1524527 1524820 C 296 88.18 1315 reject_low 10 ALIGNMENT 148 YS2-16m06.q1k chr05 338 41 569515 569808 C 298 86.24 1315 reject_low 3 ALIGNMENT 136 YS2-16m06.q1k chr14 44 308 7217 7478 F 265 86.79 1315 reject_low 17 ALIGNMENT 161 YS2-16m06.q1k chr09 41 338 7570 7865 F 298 87.25 1315 reject_low 13 ALIGNMENT 212 YS2-16m07.p1k vc_4 812 1147 5871 6219 F 336 88.99 1276 reject_low 8 ALIGNMENT 0 YS2-16m07.q1k vc_4 62 824 126 125 F 763 0.00 1316 reject_low 13 ALIGNMENT 38 YS2-16m07.q1k vc_7 788 825 63 100 F 38 100.00 1316 reject_low 21 ALIGNMENT 93 YS2-16m07.q1k vc_7 1227 1032 4972 5172 C 196 83.67 1316|0,1 reject_low 15 ALIGNMENT 0 YS2-16m07.q1k vc_3 62 824 2531 2530 F 763 0.00 1316 reject_low 11 ALIGNMENT 0 YS2-16m07.q1k vc_2 784 62 2146 2145 C 723 0.00 1316 reject_low 18 ALIGNMENT 262 YS2-16m07.q1k vc_3 825 1227 2531 2941 F 403 89.58 1316 reject_low 11 ALIGNMENT 0 YS2-16m07.q1k vc_7 62 787 13525 13524 F 726 0.00 1316 reject_low 22 ALIGNMENT 262 YS2-16m07.q1k vc_1 825 1227 2531 2941 F 403 89.58 1316 reject_low 9 ALIGNMENT 136 YS2-16m07.q1k vc_4 825 985 6353 6514 F 161 95.65 1316|1,0 reject_low 14 ALIGNMENT 0 YS2-16m07.p1k vc_1 811 62 2106 2105 C 750 0.00 1276 reject_low 4 ALIGNMENT 0 YS2-16m07.q1k vc_2 62 824 2164 2163 F 763 0.00 1316 reject_low 10 ALIGNMENT 0 YS2-16m07.p1k vc_7 62 811 100 99 F 750 0.00 1276 reject_low 3 ALIGNMENT 0 YS2-16m07.p1k vc_7 62 811 13562 13561 F 750 0.00 1276 reject_low 7 ALIGNMENT 704 YS2-16m07.p1k chr09 36 793 210722 211477 F 758 98.81 1276 accept_chi 1 ALIGNMENT 36 YS2-16m07.q1k vc_5 822 787 1 36 C 36 100.00 1316 reject_low 23 ALIGNMENT 0 YS2-16m07.q1k vc_4 824 62 5813 5812 C 763 0.00 1316 reject_low 12 ALIGNMENT 0 YS2-16m07.q1k vc_7 824 62 2728 2727 C 763 0.00 1316 reject_low 3 ALIGNMENT 709 YS2-16m07.q1k chr09 786 35 210722 211473 C 752 99.07 1316 accept_chi 0 ALIGNMENT 0 YS2-16m07.p1k vc_2 811 62 2106 2105 C 750 0.00 1276 reject_low 5 ALIGNMENT 0 YS2-16m07.q1k vc_4 824 62 1535 1534 C 763 0.00 1316 reject_low 16 ALIGNMENT 262 YS2-16m07.q1k vc_7 1227 825 2317 2727 C 403 89.58 1316 reject_low 3 ALIGNMENT 255 YS2-16m07.q1k vc_4 1227 825 5400 5812 C 403 89.08 1316 reject_low 12 ALIGNMENT 240 YS2-16m07.p1k vc_7 812 1227 100 535 F 416 87.50 1276 reject_low 3 ALIGNMENT 0 YS2-16m07.q1k vc_1 784 62 2513 2512 C 723 0.00 1316 reject_low 17 ALIGNMENT 240 YS2-16m07.p1k vc_5 1227 812 4590 5025 C 416 87.74 1276 reject_low 2 ALIGNMENT 0 YS2-16m07.p1k vc_3 811 62 2106 2105 C 750 0.00 1276 reject_low 6 ALIGNMENT 0 YS2-16m07.q1k vc_1 62 824 2531 2530 F 763 0.00 1316 reject_low 9 ALIGNMENT 0 YS2-16m07.q1k vc_5 62 824 2398 2397 F 763 0.00 1316 reject_low 2 ALIGNMENT 41 YS2-16m07.q1k vc_4 785 825 5831 5871 F 41 100.00 1316 reject_low 14 ALIGNMENT 262 YS2-16m07.q1k vc_5 825 1227 2398 2808 F 403 89.58 1316 reject_low 2 ALIGNMENT 240 YS2-16m07.p1k vc_3 1227 812 1670 2105 C 416 87.74 1276 reject_low 6 ALIGNMENT 0 YS2-16m07.q1k vc_4 826 825 5872 6353 F 0 0.00 1316 reject_low 14 ALIGNMENT 0 YS2-16m07.q1k chr09 839 787 210723 210722 C 53 0.00 1316 accept_chi 0 ALIGNMENT 41 YS2-16m07.q1k vc_1 825 785 2472 2512 C 41 100.00 1316 reject_low 17 ALIGNMENT 0 YS2-16m07.p1k vc_4 62 811 5871 5870 F 750 0.00 1276 reject_low 8 ALIGNMENT 240 YS2-16m07.p1k vc_7 812 1227 13562 13997 F 416 87.50 1276 reject_low 7 ALIGNMENT 240 YS2-16m07.p1k vc_1 1227 812 1670 2105 C 416 87.74 1276 reject_low 4 ALIGNMENT 85 YS2-16m07.q1k vc_4 913 825 1446 1534 C 89 98.88 1316 reject_low 16 ALIGNMENT 0 YS2-16m07.p1k vc_5 811 62 5026 5025 C 750 0.00 1276 reject_low 2 ALIGNMENT 41 YS2-16m07.q1k vc_3 825 785 2472 2512 C 41 100.00 1316 reject_low 19 ALIGNMENT 36 YS2-16m07.q1k vc_7 1033 985 6360 6411 C 49 93.88 1316|1,0 reject_low 15 ALIGNMENT 0 YS2-16m07.q1k vc_5 786 62 5064 5063 C 725 0.00 1316 reject_low 20 ALIGNMENT 0 YS2-16m07.q1k vc_7 62 787 63 62 F 726 0.00 1316 reject_low 21 ALIGNMENT 0 YS2-16m07.q1k vc_5 786 62 37 36 C 725 0.00 1316 reject_low 23 ALIGNMENT 38 YS2-16m07.q1k vc_7 788 825 13525 13562 F 38 100.00 1316 reject_low 22 ALIGNMENT 0 YS2-16m07.q1k vc_7 1032 1033 5172 6360 C 0 0.00 1316 reject_low 15 ALIGNMENT 39 YS2-16m07.q1k vc_5 825 787 5025 5063 C 39 100.00 1316 reject_low 20 ALIGNMENT 240 YS2-16m07.p1k vc_2 1227 812 1670 2105 C 416 87.74 1276 reject_low 5 ALIGNMENT 136 YS2-16m07.q1k vc_4 825 985 126 287 F 161 95.65 1316 reject_low 13 ALIGNMENT 0 YS2-16m07.q1k vc_3 784 62 2513 2512 C 723 0.00 1316 reject_low 19 ALIGNMENT 0 YS2-16m07.q1k vc_7 984 62 6412 6411 C 923 0.00 1316 reject_low 15 ALIGNMENT 0 YS2-16m07.q1k vc_4 62 784 5831 5830 F 723 0.00 1316 reject_low 14 ALIGNMENT 41 YS2-16m07.q1k vc_2 825 785 2105 2145 C 41 100.00 1316 reject_low 18 ALIGNMENT 262 YS2-16m07.q1k vc_2 825 1227 2164 2574 F 403 89.58 1316 reject_low 10 ALIGNMENT 0 YS2-16m07.q1k vc_5 839 823 2 1 C 17 0.00 1316 reject_low 23 ALIGNMENT 0 YS2-16m08.q1k chr08 750 879 365459 365458 F 130 0.00 1259 reject_low 3 ALIGNMENT 29 YS2-16m08.q1k chr15 713 749 427899 427935 F 37 94.59 1259 reject_low 2 ALIGNMENT 0 YS2-16m08.q1k chr15 758 879 428057 428056 F 122 0.00 1259 reject_low 1 ALIGNMENT 940 YS2-16m08.p1k chr12 1227 40 588132 589337 C 1188 95.29 1280 accept 0 ALIGNMENT 26 YS2-16m08.q1k chr15 715 757 428015 428057 F 43 90.70 1259 reject_low 1 ALIGNMENT 0 YS2-16m08.q1k chr15 750 879 427935 427934 F 130 0.00 1259 reject_low 2 ALIGNMENT 0 YS2-16m08.q1k chr15 62 714 428015 428014 F 653 0.00 1259 reject_low 1 ALIGNMENT 0 YS2-16m08.q1k chr15 62 712 427899 427898 F 651 0.00 1259 reject_low 2 ALIGNMENT 0 YS2-16m08.q1k chr08 744 879 365420 365419 F 136 0.00 1259 reject_low 4 ALIGNMENT 26 YS2-16m08.q1k chr08 713 749 365423 365459 F 37 91.89 1259 reject_low 3 ALIGNMENT 0 YS2-16m08.q1k chr08 62 714 365392 365391 F 653 0.00 1259 reject_low 4 ALIGNMENT 24 YS2-16m08.q1k chr08 715 743 365392 365420 F 29 96.55 1259 reject_low 4 ALIGNMENT 0 YS2-16m08.q1k chr08 62 712 365423 365422 F 651 0.00 1259 reject_low 3 ALIGNMENT 891 YS2-16m08.q1k chr12 31 1097 584366 585455 F 1067 96.81 1259 accept 0 ALIGNMENT 41 YS2-16m09.q1k vc_4 299 339 5831 5871 F 41 100.00 339 reject_low 5 ALIGNMENT 0 YS2-16m09.q1k chr15 299 339 1055113 1055112 F 41 0.00 339 accept_chi 0 ALIGNMENT 0 YS2-16m09.q1k vc_5 300 62 37 36 C 239 0.00 339 reject_low 8 ALIGNMENT 39 YS2-16m09.q1k vc_5 339 301 5025 5063 C 39 100.00 339 reject_low 6 ALIGNMENT 0 YS2-16m09.p1k chr15 311 293 1054858 1054857 C 19 0.00 311 accept_chi 1 ALIGNMENT 41 YS2-16m09.q1k vc_3 339 299 2472 2512 C 41 100.00 339 reject_low 4 ALIGNMENT 41 YS2-16m09.q1k vc_2 339 299 2105 2145 C 41 100.00 339 reject_low 3 ALIGNMENT 38 YS2-16m09.q1k vc_7 302 339 13525 13562 F 38 100.00 339 reject_low 7 ALIGNMENT 0 YS2-16m09.q1k vc_4 62 298 5831 5830 F 237 0.00 339 reject_low 5 ALIGNMENT 246 YS2-16m09.q1k chr15 41 298 1054857 1055113 F 258 99.61 339 accept_chi 0 ALIGNMENT 245 YS2-16m09.p1k chr15 292 37 1054857 1055113 C 256 99.61 311 accept_chi 1 ALIGNMENT 41 YS2-16m09.q1k vc_1 339 299 2472 2512 C 41 100.00 339 reject_low 2 ALIGNMENT 0 YS2-16m09.q1k vc_5 300 62 5064 5063 C 239 0.00 339 reject_low 6 ALIGNMENT 0 YS2-16m09.q1k vc_1 298 62 2513 2512 C 237 0.00 339 reject_low 2 ALIGNMENT 0 YS2-16m09.q1k vc_2 298 62 2146 2145 C 237 0.00 339 reject_low 3 ALIGNMENT 36 YS2-16m09.q1k vc_5 336 301 1 36 C 36 100.00 339 reject_low 8 ALIGNMENT 0 YS2-16m09.q1k vc_7 62 301 13525 13524 F 240 0.00 339 reject_low 7 ALIGNMENT 0 YS2-16m09.q1k vc_3 298 62 2513 2512 C 237 0.00 339 reject_low 4 ALIGNMENT 1036 YS2-16m13.p1k chr12 35 1203 1033806 1034980 F 1169 97.26 1254 accept_chi 0 ALIGNMENT 835 YS2-16m13.q1k chr10 41 994 616985 617953 F 954 97.48 1230 accept_chi 1 ALIGNMENT 965 YS2-16m14.q1k chr14 49 1149 582929 584043 F 1101 97.00 1317 accept 0 ALIGNMENT 986 YS2-16m14.p1k chr14 1265 34 585375 586609 C 1232 94.97 1279 accept 0 ALIGNMENT 1057 YS2-16m16.p1k chr09 39 1263 32284 33513 F 1225 96.73 1291 accept 0 ALIGNMENT 967 YS2-16m16.q1k chr09 1227 45 36615 37791 C 1183 94.67 1365 accept 0 ALIGNMENT 964 YS2-16m17.p1k chr11 1157 36 543311 544447 C 1122 96.61 1395 accept 0 ALIGNMENT 1013 YS2-16m17.q1k chr11 41 1255 540287 541509 F 1215 96.05 1336 accept 0 ALIGNMENT 1010 YS2-16m18.p1k chr12 1151 34 462626 463760 C 1118 97.32 1404 accept 0 ALIGNMENT 1010 YS2-16m18.p1k chr12 1151 34 453489 454623 C 1118 97.32 1404 reject_low 1 ALIGNMENT 883 YS2-16m18.q1k chr12 30 1236 458237 459418 F 1207 93.62 1337 accept 0 ALIGNMENT 883 YS2-16m18.q1k chr12 30 1236 467374 468555 F 1207 93.62 1337 reject_low 2 ALIGNMENT 1006 YS2-16m19.p1k chr12 38 1187 453462 454629 F 1150 96.61 1220 accept 0 ALIGNMENT 959 YS2-16m19.q1k chr12 1148 41 457067 458178 C 1108 96.39 1335 accept 0 ALIGNMENT 1006 YS2-16m19.p1k chr12 38 1187 462599 463766 F 1150 96.61 1220 accept 1 ALIGNMENT 959 YS2-16m19.q1k chr12 1148 41 466204 467315 C 1108 96.39 1335 accept 1 ALIGNMENT 0 YS2-16m20.q1k chr05 839 513 85677 85676 C 327 0.00 1280 reject_low 1 ALIGNMENT 344 YS2-16m20.q1k chr05 512 54 85676 86134 C 459 91.72 1280 reject_low 1 ALIGNMENT 1024 YS2-16m20.p1k chr10 1236 42 526493 527694 C 1195 95.98 1239 accept 0 ALIGNMENT 906 YS2-16m20.q1k chr10 43 1064 524826 525863 F 1022 97.85 1280 accept 0 ALIGNMENT 1047 YS2-16m21.p1k chr04 1222 37 823208 824403 C 1186 97.13 1289 accept 0 ALIGNMENT 917 YS2-16m21.q1k chr04 40 1138 820176 821289 F 1099 96.09 1276 accept 0 ALIGNMENT 452 YS2-16m22.p1k vc_6 598 1 5403 6012 C 598 93.81 677 reject_vc 1 ALIGNMENT 661 YS2-16m22.q1k scplasm1 1136 45 1789 2886 C 1092 87.64 1301 accept_chi 0 ALIGNMENT 451 YS2-16m22.p1k scplasm1 598 2 5710 6318 C 597 93.80 677 accept_chi 2 ALIGNMENT 0 YS2-16m23.p1k chr08 62 183 214266 214265 F 122 0.00 1193 reject_low 1 ALIGNMENT 846 YS2-16m23.p1k chr08 184 1189 214266 215270 F 1006 96.42 1193 reject_low 1 ALIGNMENT 956 YS2-16m23.p1k chr08 42 1189 212118 213272 F 1148 96.17 1193 accept 0 ALIGNMENT 989 YS2-16m23.q1k chr08 1151 49 217402 218502 C 1103 97.01 1290 accept 0 ALIGNMENT 1027 YS2-16m24.p1k chr11 39 1138 505062 506159 F 1100 98.64 1191 accept 0 ALIGNMENT 914 YS2-16m24.q1k chr11 1073 35 508536 509591 C 1039 96.82 1206 accept 0 ALIGNMENT 1024 YS2-16n05.p1k chr12 1272 36 453667 454913 C 1237 94.91 1297 reject_low 1 ALIGNMENT 988 YS2-16n05.q1k chr12 32 1264 460450 461715 F 1233 94.48 1295 accept 0 ALIGNMENT 604 YS2-16n05.q1k chr12 492 1249 489754 490528 F 758 93.80 1295 reject_low 2 ALIGNMENT 893 YS2-16n05.q1k chr12 137 1264 451419 452578 F 1128 94.15 1295 reject_low 1 ALIGNMENT 1024 YS2-16n05.p1k chr12 1272 36 462804 464050 C 1237 94.91 1297 accept 0 ALIGNMENT 0 YS2-16n05.q1k chr12 62 491 489754 489753 F 430 0.00 1295 reject_low 2 ALIGNMENT 0 YS2-16n05.q1k chr12 62 136 451419 451418 F 75 0.00 1295 reject_low 1 ALIGNMENT 36 YS2-16n06.q1k vc_5 670 635 1 36 C 36 100.00 673 reject_vc 6 ALIGNMENT 0 YS2-16n06.q1k vc_4 62 632 5831 5830 F 571 0.00 673 reject_vc 3 ALIGNMENT 0 YS2-16n06.q1k vc_5 634 62 5064 5063 C 573 0.00 673 reject_vc 4 ALIGNMENT 41 YS2-16n06.q1k vc_2 673 633 2105 2145 C 41 100.00 673 reject_vc 1 ALIGNMENT 41 YS2-16n06.q1k vc_1 673 633 2472 2512 C 41 100.00 673 reject_vc 0 ALIGNMENT 41 YS2-16n06.q1k vc_4 633 673 5831 5871 F 41 100.00 673 reject_vc 3 ALIGNMENT 0 YS2-16n06.q1k vc_1 632 62 2513 2512 C 571 0.00 673 reject_vc 0 ALIGNMENT 0 YS2-16n06.q1k vc_2 632 62 2146 2145 C 571 0.00 673 reject_vc 1 ALIGNMENT 38 YS2-16n06.q1k vc_7 636 673 13525 13562 F 38 100.00 673 reject_vc 5 ALIGNMENT 39 YS2-16n06.q1k vc_5 673 635 5025 5063 C 39 100.00 673 reject_vc 4 ALIGNMENT 41 YS2-16n06.q1k vc_3 673 633 2472 2512 C 41 100.00 673 reject_vc 2 ALIGNMENT 0 YS2-16n06.q1k vc_3 632 62 2513 2512 C 571 0.00 673 reject_vc 2 ALIGNMENT 0 YS2-16n06.q1k vc_7 62 635 13525 13524 F 574 0.00 673 reject_vc 5 ALIGNMENT 0 YS2-16n06.q1k vc_5 634 62 37 36 C 573 0.00 673 reject_vc 6 ALIGNMENT 0 YS2-16n07.p1k chr05 62 349 397266 397265 F 288 0.00 1254 reject_low 1 ALIGNMENT 0 YS2-16n07.p1k chr05 735 887 397650 397649 F 153 0.00 1254 reject_low 1 ALIGNMENT 320 YS2-16n07.p1k chr05 350 734 397266 397650 F 385 94.55 1254 reject_low 1 ALIGNMENT 1000 YS2-16n07.q1k chr02 31 1201 58788 59958 F 1171 96.41 1321 accept 0 ALIGNMENT 912 YS2-16n07.p1k chr02 1080 39 59452 60511 C 1042 97.22 1254 accept 0 ALIGNMENT 952 YS2-16n08.p1k chr04 31 1112 385107 386203 F 1082 97.13 1262 accept 0 ALIGNMENT 1038 YS2-16n08.q1k chr04 1264 41 389021 390257 C 1224 96.00 1322 accept 0 ALIGNMENT 967 YS2-16n10.q1k chr08 1137 25 68344 69463 C 1113 97.21 1312 accept 0 ALIGNMENT 975 YS2-16n10.p1k chr08 34 1224 67154 68344 F 1191 94.79 1279 accept 0 ALIGNMENT 1023 YS2-16n11.q1k chr04 30 1227 1066754 1067963 F 1198 96.16 1329 accept 0 ALIGNMENT 1074 YS2-16n11.p1k chr04 1254 33 1070821 1072039 C 1222 96.81 1340 accept 0 ALIGNMENT 1046 YS2-16n12.p1k chr14 30 1208 548007 549199 F 1179 97.12 1290 accept 0 ALIGNMENT 987 YS2-16n12.q1k chr14 1224 41 550850 552035 C 1184 94.76 1370 accept 0 ALIGNMENT 1012 YS2-16n15.p1k chr07 1211 37 218963 220141 C 1175 97.28 1291 accept 0 ALIGNMENT 932 YS2-16n15.q1k chr07 49 1153 215234 216349 F 1105 96.11 1350 accept 0 ALIGNMENT 36 YS2-16n16.q1k vc_5 891 856 1 36 C 36 100.00 1314 reject_low 24 ALIGNMENT 40 YS2-16n16.q1k vc_2 894 855 2105 2144 C 40 100.00 1314 reject_low 19 ALIGNMENT 28 YS2-16n16.q1k vc_7 1105 1058 6360 6411 C 48 89.58 1314|1,0 reject_low 25 ALIGNMENT 180 YS2-16n16.q1k vc_7 1154 894 2465 2727 C 261 90.80 1314 reject_low 3 ALIGNMENT 22 YS2-16n16.p1k vc_3 910 884 2441 2468 C 27 96.30 1267 reject_low 17 ALIGNMENT 22 YS2-16n16.p1k vc_1 910 884 2441 2468 C 27 96.30 1267 reject_low 16 ALIGNMENT 189 YS2-16n16.p1k vc_3 1153 884 1825 2101 C 270 91.85 1267 reject_low 6 ALIGNMENT 0 YS2-16n16.q1k vc_5 855 62 5064 5063 C 794 0.00 1314 reject_low 21 ALIGNMENT 0 YS2-16n16.p1k vc_1 883 62 2469 2468 C 822 0.00 1267 reject_low 16 ALIGNMENT 37 YS2-16n16.q1k vc_7 1154 1104 5120 5172 C 51 92.16 1314|0,1 reject_low 25 ALIGNMENT 0 YS2-16n16.q1k vc_7 62 856 13525 13524 F 795 0.00 1314 reject_low 23 ALIGNMENT 0 YS2-16n16.q1k vc_4 62 854 5832 5831 F 793 0.00 1314 reject_low 14 ALIGNMENT 0 YS2-16n16.p1k vc_3 883 62 2469 2468 C 822 0.00 1267 reject_low 17 ALIGNMENT 38 YS2-16n16.q1k vc_7 857 894 63 100 F 38 100.00 1314 reject_low 22 ALIGNMENT 40 YS2-16n16.q1k vc_4 855 894 5832 5871 F 40 100.00 1314 reject_low 14 ALIGNMENT 0 YS2-16n16.q1k vc_1 854 62 2512 2511 C 793 0.00 1314 reject_low 18 ALIGNMENT 189 YS2-16n16.p1k vc_1 1153 884 1825 2101 C 270 91.85 1267 reject_low 4 ALIGNMENT 0 YS2-16n16.p1k vc_2 883 62 2102 2101 C 822 0.00 1267 reject_low 5 ALIGNMENT 0 YS2-16n16.p1k vc_5 883 62 5022 5021 C 822 0.00 1267 reject_low 2 ALIGNMENT 189 YS2-16n16.p1k vc_7 884 1153 104 380 F 270 91.85 1267 reject_low 3 ALIGNMENT 0 YS2-16n16.q1k vc_7 1057 62 6412 6411 C 996 0.00 1314 reject_low 25 ALIGNMENT 0 YS2-16n16.p1k chr04 864 891 908534 908533 F 28 0.00 1267 accept_chi 0 ALIGNMENT 189 YS2-16n16.p1k vc_4 884 1153 5875 6151 F 270 91.85 1267 reject_low 7 ALIGNMENT 0 YS2-16n16.q1k vc_7 1104 1105 5172 6360 C 0 0.00 1314 reject_low 25 ALIGNMENT 40 YS2-16n16.q1k vc_1 894 855 2472 2511 C 40 100.00 1314 reject_low 18 ALIGNMENT 189 YS2-16n16.p1k vc_5 1153 884 4745 5021 C 270 91.85 1267 reject_low 2 ALIGNMENT 778 YS2-16n16.p1k chr04 40 863 907711 908534 F 824 99.15 1267 accept_chi 0 ALIGNMENT 0 YS2-16n16.q1k vc_4 62 893 126 125 F 832 0.00 1314 reject_low 13 ALIGNMENT 0 YS2-16n16.p1k vc_7 62 883 104 103 F 822 0.00 1267 reject_low 3 ALIGNMENT 0 YS2-16n16.q1k vc_5 855 62 37 36 C 794 0.00 1314 reject_low 24 ALIGNMENT 39 YS2-16n16.q1k vc_5 894 856 5025 5063 C 39 100.00 1314 reject_low 21 ALIGNMENT 189 YS2-16n16.p1k vc_7 884 1153 13566 13842 F 270 91.85 1267 reject_low 8 ALIGNMENT 180 YS2-16n16.q1k vc_3 894 1154 2531 2793 F 261 90.80 1314 reject_low 11 ALIGNMENT 118 YS2-16n16.q1k vc_4 894 1058 126 287 F 165 90.91 1314 reject_low 13 ALIGNMENT 180 YS2-16n16.q1k vc_1 894 1154 2531 2793 F 261 90.80 1314 reject_low 9 ALIGNMENT 0 YS2-16n16.p1k vc_4 62 883 5875 5874 F 822 0.00 1267 reject_low 7 ALIGNMENT 0 YS2-16n16.p1k vc_1 883 62 2102 2101 C 822 0.00 1267 reject_low 4 ALIGNMENT 0 YS2-16n16.q1k vc_2 62 893 2164 2163 F 832 0.00 1314 reject_low 10 ALIGNMENT 0 YS2-16n16.q1k vc_4 895 894 5872 6353 F 0 0.00 1314 reject_low 14 ALIGNMENT 38 YS2-16n16.q1k vc_7 857 894 13525 13562 F 38 100.00 1314 reject_low 23 ALIGNMENT 0 YS2-16n16.q1k vc_7 893 62 2728 2727 C 832 0.00 1314 reject_low 3 ALIGNMENT 767 YS2-16n16.q1k chr04 854 32 907711 908534 C 823 98.78 1314 accept_chi 1 ALIGNMENT 180 YS2-16n16.q1k vc_5 894 1154 2398 2660 F 261 90.80 1314 reject_low 2 ALIGNMENT 189 YS2-16n16.p1k vc_2 1153 884 1825 2101 C 270 91.85 1267 reject_low 5 ALIGNMENT 40 YS2-16n16.q1k vc_3 894 855 2472 2511 C 40 100.00 1314 reject_low 20 ALIGNMENT 0 YS2-16n16.q1k vc_4 893 62 5813 5812 C 832 0.00 1314 reject_low 12 ALIGNMENT 0 YS2-16n16.p1k vc_3 883 62 2102 2101 C 822 0.00 1267 reject_low 6 ALIGNMENT 71 YS2-16n16.q1k vc_4 979 894 1450 1534 C 86 93.02 1314 reject_low 15 ALIGNMENT 0 YS2-16n16.q1k vc_7 62 856 63 62 F 795 0.00 1314 reject_low 22 ALIGNMENT 0 YS2-16n16.q1k vc_1 62 893 2531 2530 F 832 0.00 1314 reject_low 9 ALIGNMENT 0 YS2-16n16.q1k vc_3 62 893 2531 2530 F 832 0.00 1314 reject_low 11 ALIGNMENT 0 YS2-16n16.q1k vc_5 62 893 2398 2397 F 832 0.00 1314 reject_low 2 ALIGNMENT 118 YS2-16n16.q1k vc_4 894 1058 6353 6514 F 165 90.91 1314|1,0 reject_low 14 ALIGNMENT 0 YS2-16n16.q1k vc_4 893 62 1535 1534 C 832 0.00 1314 reject_low 15 ALIGNMENT 180 YS2-16n16.q1k vc_2 894 1154 2164 2426 F 261 90.80 1314 reject_low 10 ALIGNMENT 0 YS2-16n16.q1k vc_3 854 62 2512 2511 C 793 0.00 1314 reject_low 20 ALIGNMENT 0 YS2-16n16.q1k vc_2 854 62 2145 2144 C 793 0.00 1314 reject_low 19 ALIGNMENT 0 YS2-16n16.p1k vc_7 62 883 13566 13565 F 822 0.00 1267 reject_low 8 ALIGNMENT 173 YS2-16n16.q1k vc_4 1154 894 5548 5812 C 261 90.04 1314 reject_low 12 ALIGNMENT 1070 YS2-16n17.p1k chr07 36 1186 676299 677457 F 1151 98.09 1425 accept 0 ALIGNMENT 1007 YS2-16n17.q1k chr07 1154 44 680370 681494 C 1111 97.75 1318 accept 0 ALIGNMENT 489 YS2-16n18.p1k vc_7 1 749 456 1219 F 749 90.12 858 reject_vc 5 ALIGNMENT 39 YS2-16n18.q1k vc_5 249 211 5025 5063 C 39 100.00 249 reject_low 12 ALIGNMENT 167 YS2-16n18.q1k chr15 209 35 34085 34259 C 175 98.86 249 accept 0 ALIGNMENT 0 YS2-16n18.q1k vc_5 210 62 5064 5063 C 149 0.00 249 reject_low 12 ALIGNMENT 0 YS2-16n18.p1k vc_1 548 62 9175 9174 C 487 0.00 858 reject_vc 15 ALIGNMENT 0 YS2-16n18.q1k vc_7 62 211 13525 13524 F 150 0.00 249 reject_low 13 ALIGNMENT 487 YS2-16n18.p1k vc_7 1 702 13918 14626 F 702 91.31 858 reject_vc 7 ALIGNMENT 44 YS2-16n18.p1k vc_1 749 549 8960 9174 C 201 77.61 858 reject_vc 15 ALIGNMENT 44 YS2-16n18.p1k vc_3 749 549 8231 8445 C 201 77.61 858 reject_vc 17 ALIGNMENT 495 YS2-16n18.p1k vc_2 749 1 986 1749 C 749 90.39 858 reject_vc 3 ALIGNMENT 0 YS2-16n18.q1k vc_5 210 62 37 36 C 149 0.00 249 reject_low 14 ALIGNMENT 0 YS2-16n18.q1k vc_2 208 62 2146 2145 C 147 0.00 249 reject_low 9 ALIGNMENT 496 YS2-16n18.p1k vc_6 1 702 3712 4420 F 702 91.74 858 reject_vc 6 ALIGNMENT 44 YS2-16n18.p1k vc_2 749 549 8593 8807 C 201 77.61 858 reject_vc 16 ALIGNMENT 41 YS2-16n18.q1k vc_4 209 249 5831 5871 F 41 100.00 249 reject_low 11 ALIGNMENT 0 YS2-16n18.q1k vc_3 208 62 2513 2512 C 147 0.00 249 reject_low 10 ALIGNMENT 0 YS2-16n18.q1k vc_4 62 208 5831 5830 F 147 0.00 249 reject_low 11 ALIGNMENT 38 YS2-16n18.q1k vc_7 212 249 13525 13562 F 38 100.00 249 reject_low 13 ALIGNMENT 495 YS2-16n18.p1k vc_3 749 1 986 1749 C 749 90.39 858 reject_vc 4 ALIGNMENT 41 YS2-16n18.q1k vc_3 249 209 2472 2512 C 41 100.00 249 reject_low 10 ALIGNMENT 0 YS2-16n18.q1k vc_1 208 62 2513 2512 C 147 0.00 249 reject_low 8 ALIGNMENT 495 YS2-16n18.p1k vc_1 749 1 986 1749 C 749 90.39 858 reject_vc 2 ALIGNMENT 41 YS2-16n18.q1k vc_1 249 209 2472 2512 C 41 100.00 249 reject_low 8 ALIGNMENT 36 YS2-16n18.q1k vc_5 246 211 1 36 C 36 100.00 249 reject_low 14 ALIGNMENT 0 YS2-16n18.p1k vc_2 548 62 8808 8807 C 487 0.00 858 reject_vc 16 ALIGNMENT 0 YS2-16n18.p1k vc_3 548 62 8446 8445 C 487 0.00 858 reject_vc 17 ALIGNMENT 0 YS2-16n18.q1k chr15 249 210 34086 34085 C 40 0.00 249 accept 0 ALIGNMENT 498 YS2-16n18.p1k vc_5 749 1 3906 4669 C 749 90.52 858 reject_vc 1 ALIGNMENT 41 YS2-16n18.q1k vc_2 249 209 2105 2145 C 41 100.00 249 reject_low 9 ALIGNMENT 320 YS2-16n19.p1k scplasm1 40 531 2463 2955 F 492 89.02 1277 accept 0 ALIGNMENT 331 YS2-16n19.q1k scplasm1 390 51 4312 4651 C 340 100.00 390 accept 0 ALIGNMENT 0 YS2-16n19.p1k scplasm1 532 842 2955 2954 F 311 0.00 1277 accept 0 ALIGNMENT 434 YS2-16n21.p1k vc_1 628 1 1113 1749 C 628 90.61 636 reject_low 3 ALIGNMENT 0 YS2-16n21.q1k vc_2 304 325 2624 2623 F 22 0.00 801 reject_low 10 ALIGNMENT 25 YS2-16n21.p1k vc_1 628 547 9087 9173 C 82 79.27 636 reject_low 9 ALIGNMENT 434 YS2-16n21.p1k vc_3 628 1 1113 1749 C 628 90.61 636 reject_low 5 ALIGNMENT 571 YS2-16n21.q1k vc_7 738 1 1831 2569 C 738 93.63 801 reject_low 1 ALIGNMENT 302 YS2-16n21.q1k vc_1 1 303 2689 2991 F 303 100.00 801 reject_low 9 ALIGNMENT 0 YS2-16n21.q1k vc_3 304 325 2991 2990 F 22 0.00 801 reject_low 11 ALIGNMENT 25 YS2-16n21.p1k vc_2 628 547 8720 8806 C 82 79.27 636 reject_low 10 ALIGNMENT 0 YS2-16n21.q1k vc_7 53 54 5172 6360 C 0 0.00 801 reject_low 12 ALIGNMENT 302 YS2-16n21.q1k vc_3 1 303 2689 2991 F 303 100.00 801 reject_low 11 ALIGNMENT 434 YS2-16n21.p1k vc_2 628 1 1113 1749 C 628 90.61 636 reject_low 4 ALIGNMENT 99 YS2-16n21.q1k vc_7 421 305 4583 4699 C 117 95.73 801 reject_low 12 ALIGNMENT 0 YS2-16n21.p1k vc_2 546 62 8807 8806 C 485 0.00 636 reject_low 10 ALIGNMENT 0 YS2-16n21.q1k vc_1 304 325 2991 2990 F 22 0.00 801 reject_low 9 ALIGNMENT 574 YS2-16n21.q1k vc_5 1 784 2556 3341 F 784 91.96 801 reject_vc 0 ALIGNMENT 262 YS2-16n21.q1k vc_4 308 784 1879 2357 F 477 86.58 801 reject_low 8 ALIGNMENT 397 YS2-16n21.q1k vc_4 421 1 5232 5654 C 421 98.34 801 reject_low 7 ALIGNMENT 428 YS2-16n21.p1k vc_7 1 627 456 1090 F 627 90.27 636 reject_low 1 ALIGNMENT 437 YS2-16n21.p1k vc_6 1 627 3712 4346 F 627 90.75 636 reject_low 2 ALIGNMENT 0 YS2-16n21.p1k vc_1 546 62 9174 9173 C 485 0.00 636 reject_low 9 ALIGNMENT 0 YS2-16n21.q1k vc_4 237 62 113 112 C 176 0.00 801 reject_low 13 ALIGNMENT 0 YS2-16n21.q1k vc_4 325 305 47 46 C 21 0.00 801 reject_low 13 ALIGNMENT 0 YS2-16n21.q1k vc_4 62 237 1548 1547 F 176 0.00 801 reject_low 8 ALIGNMENT 51 YS2-16n21.q1k vc_7 54 3 6360 6411 C 52 100.00 801|1,0 reject_low 12 ALIGNMENT 0 YS2-16n21.q1k vc_4 305 307 1615 1878 F 3 0.00 801 reject_low 8 ALIGNMENT 0 YS2-16n21.p1k vc_3 546 62 8445 8444 C 485 0.00 636 reject_low 11 ALIGNMENT 25 YS2-16n21.p1k vc_3 628 547 8358 8444 C 82 79.27 636 reject_low 11 ALIGNMENT 0 YS2-16n21.q1k vc_4 237 62 6340 6339 C 176 0.00 801 reject_low 14 ALIGNMENT 437 YS2-16n21.p1k vc_5 628 1 4033 4669 C 628 90.76 636 reject_vc 0 ALIGNMENT 0 YS2-16n21.q1k vc_4 325 305 6274 6273 C 21 0.00 801 reject_low 14 ALIGNMENT 247 YS2-16n21.q1k vc_7 303 53 4922 5172 C 251 99.60 801|0,1 reject_low 12 ALIGNMENT 65 YS2-16n21.q1k vc_4 304 238 6273 6339 C 67 100.00 801 reject_low 14 ALIGNMENT 302 YS2-16n21.q1k vc_2 1 303 2322 2624 F 303 100.00 801 reject_low 10 ALIGNMENT 65 YS2-16n21.q1k vc_4 238 304 1548 1614 F 67 100.00 801 reject_low 8 ALIGNMENT 0 YS2-16n21.q1k vc_7 304 304 4700 4921 C 1 0.00 801 reject_low 12 ALIGNMENT 428 YS2-16n21.p1k vc_7 1 627 13918 14552 F 627 90.27 636 reject_low 6 ALIGNMENT 65 YS2-16n21.q1k vc_4 304 238 46 112 C 67 100.00 801 reject_low 13 ALIGNMENT 1009 YS2-16n22.p1k chr02 1228 32 311086 312297 C 1197 94.99 1281 accept 0 ALIGNMENT 996 YS2-16n22.q1k chr02 41 1151 306162 307277 F 1111 96.67 1290 accept 0 ALIGNMENT 1049 YS2-16n23.p1k chr11 41 1179 505062 506201 F 1139 97.98 1183 accept 0 ALIGNMENT 990 YS2-16n23.q1k chr11 1174 36 508437 509591 C 1139 96.49 1234 accept 0 ALIGNMENT 0 YS2-16n24.p1k chr03 205 187 104976 104975 C 19 0.00 205 accept 0 ALIGNMENT 50 YS2-16n24.p1k chr03 186 125 104975 105034 C 62 96.77 205 accept 0 ALIGNMENT 1031 YS2-16o01.q1k chr10 44 1209 132678 133842 F 1166 97.08 1210 accept 0 ALIGNMENT 960 YS2-16o01.p1k chr10 1205 36 135209 136365 C 1170 94.79 1205 accept 0 ALIGNMENT 997 YS2-16o02.q1k chr04 31 1164 618032 619169 F 1134 97.53 1173 accept 0 ALIGNMENT 989 YS2-16o02.p1k chr04 1192 32 621730 622902 C 1161 96.04 1192 accept 0 ALIGNMENT 39 YS2-16o03.q1k vc_5 400 362 5025 5063 C 39 100.00 400 reject_low 6 ALIGNMENT 0 YS2-16o03.q1k vc_7 62 362 13525 13524 F 301 0.00 400 reject_low 7 ALIGNMENT 41 YS2-16o03.q1k vc_4 360 400 5831 5871 F 41 100.00 400 reject_low 5 ALIGNMENT 38 YS2-16o03.q1k vc_7 363 400 13525 13562 F 38 100.00 400 reject_low 7 ALIGNMENT 36 YS2-16o03.q1k vc_5 397 362 1 36 C 36 100.00 400 reject_low 8 ALIGNMENT 41 YS2-16o03.q1k vc_1 400 360 2472 2512 C 41 100.00 400 reject_low 2 ALIGNMENT 292 YS2-16o03.p1k chr13 30 349 455541 455861 F 320 98.75 361 accept_chi 1 ALIGNMENT 0 YS2-16o03.q1k vc_3 359 62 2513 2512 C 298 0.00 400 reject_low 4 ALIGNMENT 0 YS2-16o03.q1k vc_5 361 62 37 36 C 300 0.00 400 reject_low 8 ALIGNMENT 0 YS2-16o03.q1k chr13 400 361 455536 455535 C 40 0.00 400 accept_chi 0 ALIGNMENT 0 YS2-16o03.q1k vc_4 62 359 5831 5830 F 298 0.00 400 reject_low 5 ALIGNMENT 300 YS2-16o03.q1k chr13 360 34 455535 455861 C 327 98.78 400 accept_chi 0 ALIGNMENT 41 YS2-16o03.q1k vc_2 400 360 2105 2145 C 41 100.00 400 reject_low 3 ALIGNMENT 41 YS2-16o03.q1k vc_3 400 360 2472 2512 C 41 100.00 400 reject_low 4 ALIGNMENT 0 YS2-16o03.q1k vc_2 359 62 2146 2145 C 298 0.00 400 reject_low 3 ALIGNMENT 0 YS2-16o03.q1k vc_5 361 62 5064 5063 C 300 0.00 400 reject_low 6 ALIGNMENT 0 YS2-16o03.q1k vc_1 359 62 2513 2512 C 298 0.00 400 reject_low 2 ALIGNMENT 1001 YS2-16o04.q1k chr03 1217 38 26900 28079 C 1180 96.61 1254 accept 0 ALIGNMENT 985 YS2-16o04.p1k chr03 40 1174 21977 23102 F 1135 97.09 1236 accept 0 ALIGNMENT 855 YS2-16o05.q1k chr11 29 998 449758 450741 F 970 97.32 1216 accept 0 ALIGNMENT 1043 YS2-16o05.p1k chr11 1252 38 453476 454689 C 1215 96.46 1252 accept 0 ALIGNMENT 1048 YS2-16o06.p1k chr05 36 1253 66598 67803 F 1218 96.47 1273 accept 0 ALIGNMENT 863 YS2-16o06.q1k chr05 1034 33 71658 72673 C 1002 96.41 1203 accept 0 ALIGNMENT 0 YS2-16o07.q1k chr02 206 246 624886 624885 F 41 0.00 246 accept_chi 0 ALIGNMENT 138 YS2-16o07.p1k chr02 200 37 624721 624884 C 164 96.34 218 accept_chi 1 ALIGNMENT 41 YS2-16o07.q1k vc_2 246 206 2105 2145 C 41 100.00 246 reject_low 3 ALIGNMENT 41 YS2-16o07.q1k vc_3 246 206 2472 2512 C 41 100.00 246 reject_low 4 ALIGNMENT 0 YS2-16o07.q1k vc_4 62 205 5831 5830 F 144 0.00 246 reject_low 5 ALIGNMENT 140 YS2-16o07.q1k chr02 40 205 624721 624886 F 166 96.39 246 accept_chi 0 ALIGNMENT 0 YS2-16o07.p1k chr02 218 201 624722 624721 C 18 0.00 218 accept_chi 1 ALIGNMENT 0 YS2-16o07.q1k vc_5 207 62 5064 5063 C 146 0.00 246 reject_low 6 ALIGNMENT 0 YS2-16o07.q1k vc_7 62 208 13525 13524 F 147 0.00 246 reject_low 7 ALIGNMENT 38 YS2-16o07.q1k vc_7 209 246 13525 13562 F 38 100.00 246 reject_low 7 ALIGNMENT 0 YS2-16o07.q1k vc_3 205 62 2513 2512 C 144 0.00 246 reject_low 4 ALIGNMENT 39 YS2-16o07.q1k vc_5 246 208 5025 5063 C 39 100.00 246 reject_low 6 ALIGNMENT 41 YS2-16o07.q1k vc_4 206 246 5831 5871 F 41 100.00 246 reject_low 5 ALIGNMENT 36 YS2-16o07.q1k vc_5 243 208 1 36 C 36 100.00 246 reject_low 8 ALIGNMENT 0 YS2-16o07.q1k vc_1 205 62 2513 2512 C 144 0.00 246 reject_low 2 ALIGNMENT 0 YS2-16o07.q1k vc_2 205 62 2146 2145 C 144 0.00 246 reject_low 3 ALIGNMENT 41 YS2-16o07.q1k vc_1 246 206 2472 2512 C 41 100.00 246 reject_low 2 ALIGNMENT 0 YS2-16o07.q1k vc_5 207 62 37 36 C 146 0.00 246 reject_low 8 ALIGNMENT 25 YS2-16o08.q1k chr11 831 804 576132 576159 C 28 100.00 1279 reject_low 1 ALIGNMENT 945 YS2-16o08.q1k chr09 48 1126 375855 376951 F 1079 96.85 1279 accept 0 ALIGNMENT 1023 YS2-16o08.p1k chr09 1260 39 379483 380707 C 1222 95.66 1264 accept 0 ALIGNMENT 0 YS2-16o08.q1k chr15 864 832 427908 427907 C 33 0.00 1279 reject_low 2 ALIGNMENT 0 YS2-16o08.q1k chr11 803 62 576160 576159 C 742 0.00 1279 reject_low 1 ALIGNMENT 0 YS2-16o08.q1k chr15 820 821 427918 427971 C 0 0.00 1279 reject_low 2 ALIGNMENT 25 YS2-16o08.q1k chr15 831 804 427961 427988 C 28 100.00 1279|11,0 reject_low 2 ALIGNMENT 21 YS2-16o08.q1k chr15 831 809 427907 427929 C 23 100.00 1279|0,12 reject_low 2 ALIGNMENT 0 YS2-16o08.q1k chr11 864 832 576133 576132 C 33 0.00 1279 reject_low 1 ALIGNMENT 0 YS2-16o08.q1k chr15 803 62 427989 427988 C 742 0.00 1279 reject_low 2 ALIGNMENT 0 YS2-16o10.q1k scplasm1 940 62 3934 3933 C 879 0.00 1275 reject_low 4 ALIGNMENT 21 YS2-16o10.q1k scplasm1 941 976 720 755 F 36 86.11 1275 reject_low 3 ALIGNMENT 0 YS2-16o10.q1k scplasm1 62 940 720 719 F 879 0.00 1275 reject_low 3 ALIGNMENT 0 YS2-16o10.q1k scplasm1 760 62 937 936 C 699 0.00 1275 reject_low 2 ALIGNMENT 75 YS2-16o10.q1k scplasm1 43 194 2804 2955 F 152 84.21 1275 reject_bad_break 1 ALIGNMENT 0 YS2-16o10.q1k scplasm1 195 237 2956 3187 F 43 0.00 1275 reject_bad_break 1 ALIGNMENT 229 YS2-16o10.q1k scplasm1 1081 761 611 936 C 321 91.59 1275 reject_low 2 ALIGNMENT 21 YS2-16o10.q1k scplasm1 976 941 3898 3933 C 36 86.11 1275 reject_low 4 ALIGNMENT 819 YS2-16o10.p1k scplasm1 1 931 4313 5247 F 931 96.89 961 accept_chi 0 ALIGNMENT 303 YS2-16o10.q1k scplasm1 238 1081 3188 4042 F 844 80.69 1275 reject_bad_break 1 ALIGNMENT 941 YS2-16o13.p1k chr04 36 1109 204126 205217 F 1074 96.93 1316 accept 0 ALIGNMENT 1057 YS2-16o13.q1k chr04 1247 44 205409 206613 C 1204 96.26 1287 accept 0 ALIGNMENT 995 YS2-16o17.q1k chr10 39 1183 187603 188760 F 1145 96.59 1285 accept_chi 1 ALIGNMENT 1020 YS2-16o17.p1k chr07 41 1242 296594 297807 F 1202 96.67 1278 accept_chi 0 ALIGNMENT 612 YS2-16o18.q1k chr10 52 1053 187625 188628 F 1002 88.42 1303 accept_chi 1 ALIGNMENT 699 YS2-16o18.p1k chr07 95 1136 296656 297698 F 1042 89.92 1278 accept_chi 0 ALIGNMENT 967 YS2-16o19.p1k chr02 1267 40 164878 166098 C 1228 94.38 1275 accept 0 ALIGNMENT 956 YS2-16o19.q1k chr02 42 1179 160778 161923 F 1138 95.52 1329 accept 0 ALIGNMENT 752 YS2-16o20.p1k chr02 1208 35 164919 166093 C 1174 89.44 1250 accept 0 ALIGNMENT 973 YS2-16o20.q1k chr02 36 1236 160778 161981 F 1201 95.00 1319 accept 0 ALIGNMENT 988 YS2-16o22.p1k chr14 35 1191 717083 718234 F 1157 96.37 1200 accept 0 ALIGNMENT 996 YS2-16o22.q1k chr14 1218 46 720404 721582 C 1173 96.42 1281 accept 0 ALIGNMENT 1028 YS2-16o23.q1k chr10 1236 41 365085 366276 C 1196 96.24 1239 accept 0 ALIGNMENT 1034 YS2-16o23.p1k chr10 45 1186 361863 363006 F 1142 97.46 1186 accept 0 ALIGNMENT 1008 YS2-16o24.p1k chr10 28 1161 361858 362997 F 1134 96.74 1161 accept 0 ALIGNMENT 1018 YS2-16o24.q1k chr10 1213 41 365095 366276 C 1173 96.33 1216 accept 0 ALIGNMENT 699 YS2-16p01.q1k chr14 910 10 686173 687074 C 901 93.56 1113 accept 0 ALIGNMENT 1026 YS2-16p03.q1k chr14 1205 33 685978 687157 C 1173 96.59 1240 accept 0 ALIGNMENT 1026 YS2-16p03.p1k chr14 36 1198 682605 683775 F 1163 97.59 1219 accept 0 ALIGNMENT 919 YS2-16p05.q1k chr04 1061 40 170825 171851 C 1022 97.75 1278 accept_chi 1 ALIGNMENT 923 YS2-16p05.p1k chr04 35 1065 170825 171849 F 1031 97.96 1290 accept_chi 0 ALIGNMENT 895 YS2-16p06.p1k chr04 37 1063 170825 171851 F 1027 96.79 1266 accept 0 ALIGNMENT 884 YS2-16p06.q1k chr04 1064 42 170834 171851 C 1023 96.58 1286 accept 0 ALIGNMENT 978 YS2-16p07.q1k chr11 43 1201 375252 376430 F 1159 96.29 1267 reject_bad_break 0 ALIGNMENT 0 YS2-16p07.p1k chr16 442 871 769658 769657 F 430 0.00 1263 reject_low 11 ALIGNMENT 299 YS2-16p07.p1k chr07 99 441 712209 712550 F 343 97.08 1263 reject_low 8 ALIGNMENT 0 YS2-16p07.p1k chr05 92 62 250278 250277 C 31 0.00 1263 reject_low 1 ALIGNMENT 0 YS2-16p07.p1k chr07 840 871 707537 707536 F 32 0.00 1263 reject_low 27 ALIGNMENT 310 YS2-16p07.p1k chr05 440 93 249929 250277 C 348 97.70 1263 reject_low 1 ALIGNMENT 298 YS2-16p07.p1k chr07 92 440 707191 707538 F 349 96.56 1263 reject_low 38 ALIGNMENT 0 YS2-16p07.p1k chr04 790 62 946000 945999 C 729 0.00 1263 reject_low 36 ALIGNMENT 0 YS2-16p07.p1k chr08 792 62 146373 146372 C 731 0.00 1263 reject_low 35 ALIGNMENT 0 YS2-16p07.p1k chr12 441 871 374339 374338 F 431 0.00 1263 reject_low 17 ALIGNMENT 25 YS2-16p07.p1k chr08 839 793 146325 146372 C 47 85.11 1263 reject_low 35 ALIGNMENT 27 YS2-16p07.p1k chr07 791 839 712499 712548 F 49 85.71 1263 reject_low 38 ALIGNMENT 0 YS2-16p07.p1k chr07 441 790 707539 712498 F 350 0.00 1263 reject_low 38 ALIGNMENT 24 YS2-16p07.p1k chr04 791 839 1023421 1023470 F 49 83.67 1263 reject_low 37 ALIGNMENT 0 YS2-16p07.p1k chr02 840 871 198056 198055 F 32 0.00 1263 reject_low 21 ALIGNMENT 294 YS2-16p07.p1k chr04 98 440 1023129 1023471 F 343 96.50 1263 reject_low 13 ALIGNMENT 319 YS2-16p07.p1k chr05 442 100 434625 434967 C 343 98.83 1263 reject_low 2 ALIGNMENT 0 YS2-16p07.p1k chr05 871 840 434629 434628 C 32 0.00 1263 reject_low 25 ALIGNMENT 0 YS2-16p07.p1k chr07 62 99 735987 735986 F 38 0.00 1263 reject_low 7 ALIGNMENT 0 YS2-16p07.p1k chr12 62 790 374289 374288 F 729 0.00 1263 reject_low 29 ALIGNMENT 298 YS2-16p07.p1k chr11 441 100 202289 202629 C 342 97.08 1263 reject_low 9 ALIGNMENT 0 YS2-16p07.p1k chr05 790 62 249980 249979 C 729 0.00 1263 reject_low 24 ALIGNMENT 0 YS2-16p07.p1k chr11 871 844 202288 202287 C 28 0.00 1263 reject_low 20 ALIGNMENT 26 YS2-16p07.p1k chr07 791 826 736277 736313 F 36 91.67 1263 reject_low 34 ALIGNMENT 27 YS2-16p07.p1k chr02 791 839 198007 198056 F 49 85.71 1263 reject_low 21 ALIGNMENT 297 YS2-16p07.p1k chr09 99 440 205216 205556 F 342 97.08 1263 reject_low 12 ALIGNMENT 0 YS2-16p07.p1k chr09 62 790 205506 205505 F 729 0.00 1263 reject_low 28 ALIGNMENT 0 YS2-16p07.p1k chr04 99 62 946290 946289 C 38 0.00 1263 reject_low 6 ALIGNMENT 0 YS2-16p07.p1k chr16 62 790 856831 856830 F 729 0.00 1263 reject_low 33 ALIGNMENT 0 YS2-16p07.p1k chr09 840 871 205555 205554 F 32 0.00 1263 reject_low 28 ALIGNMENT 0 YS2-16p07.p1k chr01 441 871 182953 182952 F 431 0.00 1263 reject_low 14 ALIGNMENT 0 YS2-16p07.p1k chr07 790 62 319477 319476 C 729 0.00 1263 reject_low 26 ALIGNMENT 0 YS2-16p07.p1k chr14 62 790 726525 726524 F 729 0.00 1263 reject_low 31 ALIGNMENT 0 YS2-16p07.p1k chr14 62 99 726235 726234 F 38 0.00 1263 reject_low 18 ALIGNMENT 294 YS2-16p07.p1k chr16 110 440 856551 856881 F 331 97.58 1263 reject_low 16 ALIGNMENT 27 YS2-16p07.p1k chr14 791 839 547028 547077 F 49 85.71 1263 reject_low 30 ALIGNMENT 306 YS2-16p07.p1k chr04 100 441 668091 668432 F 342 97.66 1263 reject_low 5 ALIGNMENT 190 YS2-16p07.p1k chr03 94 311 168377 168595 F 218 97.25 1263|0,3 reject_low 40 ALIGNMENT 27 YS2-16p07.p1k chr16 791 839 769607 769656 F 49 85.71 1263 reject_low 32 ALIGNMENT 0 YS2-16p07.p1k chr07 442 871 712550 712549 F 430 0.00 1263 reject_low 8 ALIGNMENT 0 YS2-16p07.p1k chr05 99 62 434968 434967 C 38 0.00 1263 reject_low 2 ALIGNMENT 0 YS2-16p07.p1k chr16 62 109 856551 856550 F 48 0.00 1263 reject_low 16 ALIGNMENT 68 YS2-16p07.p1k chr11 99 32 379309 379376 C 68 100.00 1263 reject_bad_break 0 ALIGNMENT 0 YS2-16p07.p1k chr04 62 99 668091 668090 F 38 0.00 1263 reject_low 5 ALIGNMENT 0 YS2-16p07.p1k chr16 840 871 769656 769655 F 32 0.00 1263 reject_low 32 ALIGNMENT 540 YS2-16p07.p1k chr11 1143 441 378614 379313 C 703 93.88 1263 reject_bad_break 0 ALIGNMENT 27 YS2-16p07.p1k chr16 791 839 856831 856880 F 49 85.71 1263 reject_low 33 ALIGNMENT 0 YS2-16p07.p1k chr03 441 871 169063 169062 F 431 0.00 1263 reject_low 40 ALIGNMENT 0 YS2-16p07.p1k chr16 62 790 769607 769606 F 729 0.00 1263 reject_low 32 ALIGNMENT 0 YS2-16p07.p1k chr07 871 441 319427 319426 C 431 0.00 1263 reject_low 10 ALIGNMENT 307 YS2-16p07.p1k chr07 100 440 735987 736327 F 341 97.95 1263 reject_low 7 ALIGNMENT 0 YS2-16p07.p1k chr12 840 871 374338 374337 F 32 0.00 1263 reject_low 29 ALIGNMENT 0 YS2-16p07.p1k chr01 62 790 182903 182902 F 729 0.00 1263 reject_low 19 ALIGNMENT 0 YS2-16p07.p1k chr11 99 62 202630 202629 C 38 0.00 1263 reject_low 9 ALIGNMENT 0 YS2-16p07.p1k chr08 99 62 146665 146664 C 38 0.00 1263 reject_low 3 ALIGNMENT 0 YS2-16p07.p1k chr05 871 443 434626 434625 C 429 0.00 1263 reject_low 2 ALIGNMENT 299 YS2-16p07.p1k chr07 440 100 319426 319765 C 341 97.36 1263 reject_low 10 ALIGNMENT 0 YS2-16p07.p1k chr03 309 308 168593 168931 F 0 0.00 1263 reject_low 40 ALIGNMENT 0 YS2-16p07.p1k chr04 871 840 945951 945950 C 32 0.00 1263 reject_low 36 ALIGNMENT 0 YS2-16p07.p1k chr03 840 871 169062 169061 F 32 0.00 1263 reject_low 22 ALIGNMENT 310 YS2-16p07.p1k chr02 100 440 197717 198057 F 341 98.24 1263 reject_low 4 ALIGNMENT 293 YS2-16p07.p1k chr12 100 440 374000 374339 F 341 96.77 1263 reject_low 17 ALIGNMENT 0 YS2-16p07.p1k chr05 871 840 249931 249930 C 32 0.00 1263 reject_low 24 ALIGNMENT 27 YS2-16p07.p1k chr12 791 839 374289 374338 F 49 85.71 1263 reject_low 29 ALIGNMENT 0 YS2-16p07.p1k chr14 62 99 546739 546738 F 38 0.00 1263 reject_low 15 ALIGNMENT 0 YS2-16p07.p1k chr08 871 441 146325 146324 C 431 0.00 1263 reject_low 3 ALIGNMENT 24 YS2-16p07.p1k chr04 839 791 945950 945999 C 49 83.67 1263 reject_low 36 ALIGNMENT 0 YS2-16p07.p1k chr07 62 98 712209 712208 F 37 0.00 1263 reject_low 8 ALIGNMENT 0 YS2-16p07.p1k chr16 62 99 769317 769316 F 38 0.00 1263 reject_low 11 ALIGNMENT 307 YS2-16p07.p1k chr04 440 100 945949 946289 C 341 97.95 1263 reject_low 6 ALIGNMENT 27 YS2-16p07.p1k chr03 791 839 169013 169062 F 49 85.71 1263 reject_low 22 ALIGNMENT 27 YS2-16p07.p1k chr04 791 839 668381 668430 F 49 85.71 1263 reject_low 23 ALIGNMENT 0 YS2-16p07.p1k chr16 441 871 856881 856880 F 431 0.00 1263 reject_low 16 ALIGNMENT 27 YS2-16p07.p1k chr09 791 839 205506 205555 F 49 85.71 1263 reject_low 28 ALIGNMENT 0 YS2-16p07.p1k chr07 62 790 707488 707487 F 729 0.00 1263 reject_low 27 ALIGNMENT 0 YS2-16p07.p1k chr14 441 871 726575 726574 F 431 0.00 1263 reject_low 18 ALIGNMENT 0 YS2-16p07.p1k chr02 62 99 197717 197716 F 38 0.00 1263 reject_low 4 ALIGNMENT 0 YS2-16p07.p1k chr04 441 871 1023471 1023470 F 431 0.00 1263 reject_low 13 ALIGNMENT 0 YS2-16p07.p1k chr04 62 97 1023129 1023128 F 36 0.00 1263 reject_low 13 ALIGNMENT 0 YS2-16p07.p1k chr07 840 871 712548 712547 F 32 0.00 1263 reject_low 38 ALIGNMENT 0 YS2-16p07.p1k chr04 871 441 945950 945949 C 431 0.00 1263 reject_low 6 ALIGNMENT 0 YS2-16p07.p1k chr04 62 790 668381 668380 F 729 0.00 1263 reject_low 23 ALIGNMENT 0 YS2-16p07.p1k chr12 62 99 374000 373999 F 38 0.00 1263 reject_low 17 ALIGNMENT 0 YS2-16p07.p1k chr07 441 871 736327 736326 F 431 0.00 1263 reject_low 7 ALIGNMENT 27 YS2-16p07.p1k chr01 791 851 182903 182963 F 61 83.61 1263 reject_low 19 ALIGNMENT 0 YS2-16p07.p1k chr02 441 871 198057 198056 F 431 0.00 1263 reject_low 4 ALIGNMENT 0 YS2-16p07.p1k chr11 391 62 378961 378960 C 330 0.00 1263 reject_low 39 ALIGNMENT 0 YS2-16p07.p1k chr03 62 93 168377 168376 F 32 0.00 1263 reject_low 40 ALIGNMENT 0 YS2-16p07.p1k chr14 840 871 547077 547076 F 32 0.00 1263 reject_low 30 ALIGNMENT 124 YS2-16p07.p1k chr03 306 440 168929 169063 F 135 98.52 1263|3,0 reject_low 40 ALIGNMENT 0 YS2-16p07.p1k chr08 871 840 146326 146325 C 32 0.00 1263 reject_low 35 ALIGNMENT 0 YS2-16p07.p1k chr01 852 871 182963 182962 F 20 0.00 1263 reject_low 19 ALIGNMENT 0 YS2-16p07.p1k chr07 62 91 707191 707190 F 30 0.00 1263 reject_low 38 ALIGNMENT 0 YS2-16p07.p1k chr09 62 98 205216 205215 F 37 0.00 1263 reject_low 12 ALIGNMENT 27 YS2-16p07.p1k chr07 839 791 319427 319476 C 49 85.71 1263 reject_low 26 ALIGNMENT 0 YS2-16p07.p1k chr11 440 100 379314 379308 C 341 0.00 1263 reject_bad_break 0 ALIGNMENT 27 YS2-16p07.p1k chr07 791 839 707488 707537 F 49 85.71 1263 reject_low 27 ALIGNMENT 0 YS2-16p07.p1k chr14 441 871 547078 547077 F 431 0.00 1263 reject_low 15 ALIGNMENT 0 YS2-16p07.p1k chr05 871 441 249930 249929 C 431 0.00 1263 reject_low 1 ALIGNMENT 0 YS2-16p07.p1k chr07 871 840 319428 319427 C 32 0.00 1263 reject_low 26 ALIGNMENT 27 YS2-16p07.p1k chr05 839 791 434628 434677 C 49 85.71 1263 reject_low 25 ALIGNMENT 0 YS2-16p07.p1k chr07 827 871 736313 736312 F 45 0.00 1263 reject_low 34 ALIGNMENT 294 YS2-16p07.p1k chr14 100 440 546739 547078 F 341 96.77 1263 reject_low 15 ALIGNMENT 22 YS2-16p07.p1k chr11 439 392 378914 378960 C 48 83.33 1263 reject_low 39 ALIGNMENT 292 YS2-16p07.p1k chr14 100 440 726235 726575 F 341 96.48 1263 reject_low 18 ALIGNMENT 0 YS2-16p07.p1k chr04 840 871 668430 668429 F 32 0.00 1263 reject_low 23 ALIGNMENT 28 YS2-16p07.p1k chr11 843 791 202287 202340 C 53 84.91 1263 reject_low 20 ALIGNMENT 27 YS2-16p07.p1k chr14 791 839 726525 726574 F 49 85.71 1263 reject_low 31 ALIGNMENT 0 YS2-16p07.p1k chr07 99 62 319766 319765 C 38 0.00 1263 reject_low 10 ALIGNMENT 0 YS2-16p07.p1k chr04 840 871 1023470 1023469 F 32 0.00 1263 reject_low 37 ALIGNMENT 0 YS2-16p07.p1k chr09 441 871 205556 205555 F 431 0.00 1263 reject_low 12 ALIGNMENT 0 YS2-16p07.p1k chr11 871 442 202290 202289 C 430 0.00 1263 reject_low 9 ALIGNMENT 0 YS2-16p07.p1k chr05 790 62 434678 434677 C 729 0.00 1263 reject_low 25 ALIGNMENT 0 YS2-16p07.p1k chr14 840 871 726574 726573 F 32 0.00 1263 reject_low 31 ALIGNMENT 0 YS2-16p07.p1k chr14 62 790 547028 547027 F 729 0.00 1263 reject_low 30 ALIGNMENT 27 YS2-16p07.p1k chr05 839 791 249930 249979 C 49 85.71 1263 reject_low 24 ALIGNMENT 0 YS2-16p07.p1k chr11 790 62 202341 202340 C 729 0.00 1263 reject_low 20 ALIGNMENT 0 YS2-16p07.p1k chr02 62 790 198007 198006 F 729 0.00 1263 reject_low 21 ALIGNMENT 0 YS2-16p07.p1k chr04 442 871 668432 668431 F 430 0.00 1263 reject_low 5 ALIGNMENT 0 YS2-16p07.p1k chr04 62 790 1023421 1023420 F 729 0.00 1263 reject_low 37 ALIGNMENT 0 YS2-16p07.p1k chr16 840 871 856880 856879 F 32 0.00 1263 reject_low 33 ALIGNMENT 297 YS2-16p07.p1k chr01 100 440 182614 182953 F 341 97.07 1263 reject_low 14 ALIGNMENT 313 YS2-16p07.p1k chr08 440 100 146324 146664 C 341 98.53 1263 reject_low 3 ALIGNMENT 297 YS2-16p07.p1k chr16 100 441 769317 769658 F 342 96.78 1263 reject_low 11 ALIGNMENT 0 YS2-16p07.p1k chr11 871 440 378915 378914 C 432 0.00 1263 reject_low 39 ALIGNMENT 0 YS2-16p07.p1k chr03 62 790 169013 169012 F 729 0.00 1263 reject_low 22 ALIGNMENT 0 YS2-16p07.p1k chr01 62 99 182614 182613 F 38 0.00 1263 reject_low 14 ALIGNMENT 0 YS2-16p07.p1k chr07 62 790 736277 736276 F 729 0.00 1263 reject_low 34 ALIGNMENT 0 YS2-16p08.q1k vc_2 199 62 2145 2144 C 138 0.00 239 reject_low 3 ALIGNMENT 0 YS2-16p08.p1k chr16 216 199 114699 114698 C 18 0.00 216 accept_chi 0 ALIGNMENT 40 YS2-16p08.q1k vc_2 239 200 2105 2144 C 40 100.00 239 reject_low 3 ALIGNMENT 40 YS2-16p08.q1k vc_4 200 239 5832 5871 F 40 100.00 239 reject_low 5 ALIGNMENT 36 YS2-16p08.q1k vc_5 236 201 1 36 C 36 100.00 239 reject_low 8 ALIGNMENT 0 YS2-16p08.q1k chr16 200 239 114855 114854 F 40 0.00 239 accept_chi 1 ALIGNMENT 38 YS2-16p08.q1k vc_7 202 239 13525 13562 F 38 100.00 239 reject_low 7 ALIGNMENT 39 YS2-16p08.q1k vc_5 239 201 5025 5063 C 39 100.00 239 reject_low 6 ALIGNMENT 158 YS2-16p08.q1k chr16 42 199 114698 114855 F 158 100.00 239 accept_chi 1 ALIGNMENT 40 YS2-16p08.q1k vc_3 239 200 2472 2511 C 40 100.00 239 reject_low 4 ALIGNMENT 0 YS2-16p08.q1k vc_4 62 199 5832 5831 F 138 0.00 239 reject_low 5 ALIGNMENT 0 YS2-16p08.q1k vc_1 199 62 2512 2511 C 138 0.00 239 reject_low 2 ALIGNMENT 0 YS2-16p08.q1k vc_3 199 62 2512 2511 C 138 0.00 239 reject_low 4 ALIGNMENT 158 YS2-16p08.p1k chr16 198 41 114698 114855 C 158 100.00 216 accept_chi 0 ALIGNMENT 0 YS2-16p08.q1k vc_7 62 201 13525 13524 F 140 0.00 239 reject_low 7 ALIGNMENT 40 YS2-16p08.q1k vc_1 239 200 2472 2511 C 40 100.00 239 reject_low 2 ALIGNMENT 0 YS2-16p08.q1k vc_5 200 62 37 36 C 139 0.00 239 reject_low 8 ALIGNMENT 0 YS2-16p08.q1k vc_5 200 62 5064 5063 C 139 0.00 239 reject_low 6 ALIGNMENT 1060 YS2-16p09.p1k chr13 34 1270 739074 740317 F 1237 96.93 1279 accept 0 ALIGNMENT 1019 YS2-16p09.q1k chr13 1244 40 743334 744550 C 1205 95.93 1268 accept 0 ALIGNMENT 35 YS2-16p10.q1k vc_4 151 193 5830 5871 F 43 95.35 1347 reject_low 13 ALIGNMENT 0 YS2-16p10.q1k vc_4 594 283 113 1448 C 312 0.00 1347 reject_low 18 ALIGNMENT 34 YS2-16p10.q1k vc_4 282 193 1449 1534 C 90 84.44 1347 reject_low 18 ALIGNMENT 328 YS2-16p10.q1k vc_1 193 654 2531 2984 F 462 92.21 1347 reject_low 5 ALIGNMENT 0 YS2-16p10.q1k vc_4 194 193 5872 6353 F 0 0.00 1347 reject_low 13 ALIGNMENT 32 YS2-16p10.q1k vc_5 193 154 5025 5063 C 40 95.00 1347 reject_low 14 ALIGNMENT 506 YS2-16p10.q1k vc_7 1047 193 1891 2727 C 855 88.30 1347 reject_vc 0 ALIGNMENT 94 YS2-16p10.q1k chr12 38 151 463978 464091 F 114 95.61 1347 reject_low 3 ALIGNMENT 94 YS2-16p10.q1k chr12 38 151 454841 454954 F 114 95.61 1347 reject_low 2 ALIGNMENT 35 YS2-16p10.q1k vc_3 193 151 2472 2513 C 43 95.35 1347 reject_low 12 ALIGNMENT 0 YS2-16p10.q1k vc_7 407 408 5172 6360 C 0 0.00 1347 reject_low 9 ALIGNMENT 44 YS2-16p10.q1k vc_4 595 663 1548 1614 F 69 89.86 1347 reject_low 8 ALIGNMENT 69 YS2-16p10.q1k vc_7 780 664 4583 4699 C 117 87.18 1347 reject_low 9 ALIGNMENT 393 YS2-16p10.q1k vc_4 780 193 5232 5812 C 588 90.65 1347 reject_low 4 ALIGNMENT 0 YS2-16p10.q1k vc_7 663 655 4700 4928 C 9 0.00 1347 reject_low 9 ALIGNMENT 35 YS2-16p10.q1k vc_2 193 151 2105 2146 C 43 95.35 1347 reject_low 11 ALIGNMENT 0 YS2-16p10.q1k vc_4 664 668 1615 1880 F 5 0.00 1347 reject_low 8 ALIGNMENT 35 YS2-16p10.q1k vc_1 193 151 2472 2513 C 43 95.35 1347 reject_low 10 ALIGNMENT 106 YS2-16p10.q1k vc_4 193 358 126 287 F 166 90.96 1347 reject_low 8 ALIGNMENT 42 YS2-16p10.q1k vc_7 408 357 6360 6411 C 52 94.23 1347|1,0 reject_low 9 ALIGNMENT 31 YS2-16p10.q1k vc_7 155 193 13525 13562 F 39 94.87 1347 reject_low 15 ALIGNMENT 44 YS2-16p10.q1k vc_4 663 595 6273 6339 C 69 89.86 1347 reject_low 17 ALIGNMENT 507 YS2-16p10.q1k vc_5 193 1031 2398 3220 F 839 88.56 1347 reject_vc 1 ALIGNMENT 328 YS2-16p10.q1k vc_3 193 654 2531 2984 F 462 92.21 1347 reject_low 7 ALIGNMENT 328 YS2-16p10.q1k vc_2 193 654 2164 2617 F 462 92.21 1347 reject_low 6 ALIGNMENT 44 YS2-16p10.q1k vc_4 663 595 46 112 C 69 89.86 1347 reject_low 18 ALIGNMENT 180 YS2-16p10.q1k vc_7 654 407 4929 5172 C 248 92.34 1347|0,1 reject_low 9 ALIGNMENT 0 YS2-16p10.q1k vc_4 359 594 288 1547 F 236 0.00 1347 reject_low 8 ALIGNMENT 106 YS2-16p10.q1k vc_4 193 358 6353 6514 F 166 90.96 1347|1,0 reject_low 13 ALIGNMENT 171 YS2-16p10.q1k vc_4 669 1031 1881 2236 F 363 84.30 1347 reject_low 8 ALIGNMENT 31 YS2-16p10.q1k vc_5 187 154 3 36 C 34 97.06 1347 reject_low 16 ALIGNMENT 211 YS2-16p11.p1k chr02 1155 799 490137 490483 C 357 88.52 1304 reject_low 1 ALIGNMENT 0 YS2-16p11.p1k chr09 801 822 46399 46398 F 22 0.00 1304 accept 0 ALIGNMENT 367 YS2-16p11.q1k chr09 1169 526 45788 46399 C 644 89.91 1386 accept 0 ALIGNMENT 686 YS2-16p11.p1k chr09 44 800 45643 46399 F 757 98.55 1304 accept 0 ALIGNMENT 480 YS2-16p11.q1k chr02 43 527 489999 490483 F 485 99.79 1386 reject_low 1 ALIGNMENT 0 YS2-16p11.q1k chr02 528 772 490483 490482 F 245 0.00 1386 reject_low 1 ALIGNMENT 0 YS2-16p11.q1k chr09 525 62 46400 46399 C 464 0.00 1386 accept 0 ALIGNMENT 0 YS2-16p11.p1k chr02 798 62 490484 490483 C 737 0.00 1304 reject_low 1 ALIGNMENT 253 YS2-16p13.p1k chrm 35 308 79384 79658 F 274 99.64 327 accept_chi 1 ALIGNMENT 39 YS2-16p13.q1k vc_5 357 319 5025 5063 C 39 100.00 357 reject_low 5 ALIGNMENT 0 YS2-16p13.q1k vc_1 316 62 2513 2512 C 255 0.00 357 reject_low 2 ALIGNMENT 258 YS2-16p13.q1k chrm 316 42 79384 79658 C 275 100.00 357 accept_chi 0 ALIGNMENT 0 YS2-16p13.q1k vc_4 62 316 5831 5830 F 255 0.00 357 reject_low 4 ALIGNMENT 0 YS2-16p13.q1k vc_7 62 319 13525 13524 F 258 0.00 357 reject_low 6 ALIGNMENT 0 YS2-16p13.p1k chrm 309 327 79658 79657 F 19 0.00 327 accept_chi 1 ALIGNMENT 41 YS2-16p13.q1k vc_3 357 317 2472 2512 C 41 100.00 357 reject_low 3 ALIGNMENT 0 YS2-16p13.q1k chrm 357 317 79385 79384 C 41 0.00 357 accept_chi 0 ALIGNMENT 38 YS2-16p13.q1k vc_7 320 357 13525 13562 F 38 100.00 357 reject_low 6 ALIGNMENT 41 YS2-16p13.q1k vc_4 317 357 5831 5871 F 41 100.00 357 reject_low 4 ALIGNMENT 41 YS2-16p13.q1k vc_1 357 317 2472 2512 C 41 100.00 357 reject_low 2 ALIGNMENT 0 YS2-16p13.q1k vc_5 318 62 37 36 C 257 0.00 357 reject_low 7 ALIGNMENT 0 YS2-16p13.q1k vc_5 318 62 5064 5063 C 257 0.00 357 reject_low 5 ALIGNMENT 0 YS2-16p13.q1k vc_3 316 62 2513 2512 C 255 0.00 357 reject_low 3 ALIGNMENT 36 YS2-16p13.q1k vc_5 354 319 1 36 C 36 100.00 357 reject_low 7 ALIGNMENT 0 YS2-16p14.q1k vc_5 242 62 5064 5063 C 181 0.00 281 reject_low 4 ALIGNMENT 181 YS2-16p14.q1k chr07 240 36 59508 59713 C 205 99.51 281 accept 0 ALIGNMENT 0 YS2-16p14.q1k vc_1 240 62 2513 2512 C 179 0.00 281 reject_low 1 ALIGNMENT 41 YS2-16p14.q1k vc_3 281 241 2472 2512 C 41 100.00 281 reject_low 2 ALIGNMENT 38 YS2-16p14.q1k vc_7 244 281 13525 13562 F 38 100.00 281 reject_low 5 ALIGNMENT 0 YS2-16p14.q1k vc_4 62 240 5831 5830 F 179 0.00 281 reject_low 3 ALIGNMENT 0 YS2-16p14.q1k vc_3 240 62 2513 2512 C 179 0.00 281 reject_low 2 ALIGNMENT 36 YS2-16p14.q1k vc_5 278 243 1 36 C 36 100.00 281 reject_low 6 ALIGNMENT 39 YS2-16p14.q1k vc_5 281 243 5025 5063 C 39 100.00 281 reject_low 4 ALIGNMENT 41 YS2-16p14.q1k vc_1 281 241 2472 2512 C 41 100.00 281 reject_low 1 ALIGNMENT 41 YS2-16p14.q1k vc_4 241 281 5831 5871 F 41 100.00 281 reject_low 3 ALIGNMENT 0 YS2-16p14.q1k chr07 281 241 59509 59508 C 41 0.00 281 accept 0 ALIGNMENT 0 YS2-16p14.q1k vc_5 242 62 37 36 C 181 0.00 281 reject_low 6 ALIGNMENT 0 YS2-16p14.q1k vc_7 62 243 13525 13524 F 182 0.00 281 reject_low 5 ALIGNMENT 1048 YS2-16p15.q1k chr16 42 1253 382249 383475 F 1212 95.79 1334 accept 0 ALIGNMENT 1008 YS2-16p15.p1k chr16 1246 36 384728 385939 C 1211 95.54 1281 accept 0 ALIGNMENT 0 YS2-16p16.p1k chr12 683 700 815612 815611 F 18 0.00 700 accept_chi 0 ALIGNMENT 633 YS2-16p16.q1k chr12 678 28 814963 815613 C 651 99.69 678 accept_chi 1 ALIGNMENT 635 YS2-16p16.p1k chr12 33 682 814963 815612 F 650 99.85 700 accept_chi 0 ALIGNMENT 0 YS2-16p17.p1k chr14 261 813 503834 503833 F 553 0.00 1259 accept 0 ALIGNMENT 0 YS2-16p17.p1k vc_3 903 62 2106 2105 C 842 0.00 1259 reject_low 4 ALIGNMENT 133 YS2-16p17.p1k vc_3 1248 904 1757 2105 C 345 81.45 1259 reject_low 4 ALIGNMENT 201 YS2-16p17.q1k chr14 883 657 503608 503834 C 227 97.80 1375|0,3 accept 0 ALIGNMENT 0 YS2-16p17.p1k vc_4 62 903 5871 5870 F 842 0.00 1259 reject_low 5 ALIGNMENT 0 YS2-16p17.p1k vc_7 62 903 100 99 F 842 0.00 1259 reject_low 7 ALIGNMENT 133 YS2-16p17.p1k vc_7 904 1248 100 448 F 345 81.16 1259 reject_low 7 ALIGNMENT 133 YS2-16p17.p1k vc_4 904 1248 5871 6219 F 345 81.16 1259 reject_low 5 ALIGNMENT 596 YS2-16p17.p1k chr14 256 886 503941 504569 F 631 99.05 1259|3,0 reject_low 1 ALIGNMENT 133 YS2-16p17.p1k vc_5 1248 904 4677 5025 C 345 81.45 1259 reject_low 6 ALIGNMENT 609 YS2-16p17.q1k chr14 661 33 503941 504569 C 629 99.68 1375|2,0 accept 0 ALIGNMENT 0 YS2-16p17.p1k vc_5 903 62 5026 5025 C 842 0.00 1259 reject_low 6 ALIGNMENT 0 YS2-16p17.p1k vc_2 903 62 2106 2105 C 842 0.00 1259 reject_low 3 ALIGNMENT 0 YS2-16p17.q1k chr14 659 660 503832 503942 C 0 0.00 1375 accept 0 ALIGNMENT 133 YS2-16p17.p1k vc_1 1248 904 1757 2105 C 345 81.45 1259 reject_low 2 ALIGNMENT 0 YS2-16p17.p1k chr14 259 258 503833 503943 F 0 0.00 1259 reject_low 1 ALIGNMENT 217 YS2-16p17.p1k chr14 26 260 503599 503834 F 235 99.15 1259|0,2 accept 0 reject_low 1 ALIGNMENT 0 YS2-16p17.p1k vc_1 903 62 2106 2105 C 842 0.00 1259 reject_low 2 ALIGNMENT 133 YS2-16p17.p1k vc_2 1248 904 1757 2105 C 345 81.45 1259 reject_low 3 ALIGNMENT 1026 YS2-16p18.q1k chr02 47 1225 714534 715711 F 1179 96.78 1328 accept 0 ALIGNMENT 1075 YS2-16p18.p1k chr02 1296 42 716383 717621 C 1255 96.57 1297 accept 0 ALIGNMENT 38 YS2-16p20.q1k vc_7 294 331 13525 13562 F 38 100.00 331 reject_low 7 ALIGNMENT 0 YS2-16p20.p1k chr12 301 284 55033 55032 C 18 0.00 301 accept_chi 0 ALIGNMENT 0 YS2-16p20.q1k vc_2 289 62 2147 2146 C 228 0.00 331 reject_low 3 ALIGNMENT 36 YS2-16p20.q1k vc_5 328 293 1 36 C 36 100.00 331 reject_low 8 ALIGNMENT 245 YS2-16p20.p1k chr12 283 34 55032 55281 C 250 100.00 301 accept_chi 0 ALIGNMENT 0 YS2-16p20.q1k vc_7 62 293 13525 13524 F 232 0.00 331 reject_low 7 ALIGNMENT 42 YS2-16p20.q1k vc_2 331 290 2105 2146 C 42 100.00 331 reject_low 3 ALIGNMENT 0 YS2-16p20.q1k vc_5 292 62 5064 5063 C 231 0.00 331 reject_low 6 ALIGNMENT 0 YS2-16p20.q1k vc_4 62 289 5830 5829 F 228 0.00 331 reject_low 5 ALIGNMENT 0 YS2-16p20.q1k vc_3 289 62 2514 2513 C 228 0.00 331 reject_low 4 ALIGNMENT 42 YS2-16p20.q1k vc_1 331 290 2472 2513 C 42 100.00 331 reject_low 2 ALIGNMENT 0 YS2-16p20.q1k vc_5 292 62 37 36 C 231 0.00 331 reject_low 8 ALIGNMENT 39 YS2-16p20.q1k vc_5 331 293 5025 5063 C 39 100.00 331 reject_low 6 ALIGNMENT 245 YS2-16p20.q1k chr12 41 290 55032 55281 F 250 100.00 331 accept_chi 1 ALIGNMENT 42 YS2-16p20.q1k vc_3 331 290 2472 2513 C 42 100.00 331 reject_low 4 ALIGNMENT 42 YS2-16p20.q1k vc_4 290 331 5830 5871 F 42 100.00 331 reject_low 5 ALIGNMENT 0 YS2-16p20.q1k chr12 291 331 55281 55280 F 41 0.00 331 accept_chi 1 ALIGNMENT 0 YS2-16p20.q1k vc_1 289 62 2514 2513 C 228 0.00 331 reject_low 2 ALIGNMENT 967 YS2-16p21.q1k chr07 41 1111 282438 283521 F 1071 97.48 1260 accept 0 ALIGNMENT 981 YS2-16p21.p1k chr07 1200 41 286105 287269 C 1160 96.03 1204 accept 0 ALIGNMENT 367 YS2-16p22.q1k chr16 430 42 99702 100093 C 389 99.23 471 accept_chi 0 ALIGNMENT 0 YS2-16p22.q1k chr16 471 431 99703 99702 C 41 0.00 471 accept_chi 0 ALIGNMENT 41 YS2-16p22.q1k vc_1 471 431 2472 2512 C 41 100.00 471 reject_low 2 ALIGNMENT 0 YS2-16p22.q1k vc_2 430 62 2146 2145 C 369 0.00 471 reject_low 3 ALIGNMENT 36 YS2-16p22.q1k vc_5 468 433 1 36 C 36 100.00 471 reject_low 8 ALIGNMENT 41 YS2-16p22.q1k vc_3 471 431 2472 2512 C 41 100.00 471 reject_low 4 ALIGNMENT 0 YS2-16p22.q1k vc_1 430 62 2513 2512 C 369 0.00 471 reject_low 2 ALIGNMENT 41 YS2-16p22.q1k vc_4 431 471 5831 5871 F 41 100.00 471 reject_low 5 ALIGNMENT 0 YS2-16p22.q1k vc_7 62 433 13525 13524 F 372 0.00 471 reject_low 7 ALIGNMENT 0 YS2-16p22.q1k vc_5 432 62 37 36 C 371 0.00 471 reject_low 8 ALIGNMENT 0 YS2-16p22.p1k chr16 445 461 100093 100092 F 17 0.00 461 accept_chi 1 ALIGNMENT 38 YS2-16p22.q1k vc_7 434 471 13525 13562 F 38 100.00 471 reject_low 7 ALIGNMENT 357 YS2-16p22.p1k chr16 61 444 99706 100093 F 384 98.96 461 accept_chi 1 ALIGNMENT 41 YS2-16p22.q1k vc_2 471 431 2105 2145 C 41 100.00 471 reject_low 3 ALIGNMENT 39 YS2-16p22.q1k vc_5 471 433 5025 5063 C 39 100.00 471 reject_low 6 ALIGNMENT 0 YS2-16p22.q1k vc_5 432 62 5064 5063 C 371 0.00 471 reject_low 6 ALIGNMENT 0 YS2-16p22.q1k vc_3 430 62 2513 2512 C 369 0.00 471 reject_low 4 ALIGNMENT 0 YS2-16p22.q1k vc_4 62 430 5831 5830 F 369 0.00 471 reject_low 5 ALIGNMENT 924 YS2-16p23.p1k chr04 61 1189 1487121 1488248 F 1129 95.48 1195 accept 0 ALIGNMENT 1009 YS2-16p23.q1k chr04 1227 37 1487442 1488640 C 1191 96.31 1227 accept 0 ALIGNMENT 988 YS2-16p24.p1k chr12 36 1157 545640 546760 F 1122 97.59 1160 accept 0 ALIGNMENT 719 YS2-16p24.q1k chr12 905 43 547599 548453 C 863 96.52 1378 accept 0 ALIGNMENT 988 YS2-17a01.p1k chr07 35 1197 198051 199226 F 1163 95.70 1366 accept 0 ALIGNMENT 1004 YS2-17a01.q1k chr07 1236 40 202071 203287 C 1197 96.32 1301 accept 0 ALIGNMENT 1029 YS2-17a02.p1k chr12 1332 33 154992 156318 C 1300 94.62 1461 accept 0 ALIGNMENT 921 YS2-17a02.q1k chr12 34 1138 150544 151666 F 1105 96.74 1325 accept 0 ALIGNMENT 966 YS2-17a03.p1k chr04 25 1212 1482569 1483791 F 1188 95.62 1346 accept 0 ALIGNMENT 1028 YS2-17a03.q1k chr04 1189 37 1485896 1487055 C 1153 97.31 1331 accept 0 ALIGNMENT 1024 YS2-17a04.p1k chr04 1267 31 1092411 1093652 C 1237 96.04 1481 accept 0 ALIGNMENT 1052 YS2-17a04.q1k chr04 31 1236 1089603 1090813 F 1206 96.85 1387 accept 0 ALIGNMENT 0 YS2-17a05.p1k vc_1 883 77 2106 2105 C 807 0.00 1463 reject_low 2 ALIGNMENT 223 YS2-17a05.p1k vc_3 1224 884 1767 2105 C 341 89.44 1463 reject_low 4 ALIGNMENT 26 YS2-17a05.p1k vc_1 914 884 2441 2472 C 31 96.77 1463 reject_low 9 ALIGNMENT 0 YS2-17a05.p1k vc_7 77 883 100 99 F 807 0.00 1463 reject_low 7 ALIGNMENT 223 YS2-17a05.p1k vc_2 1224 884 1767 2105 C 341 89.44 1463 reject_low 3 ALIGNMENT 767 YS2-17a05.p1k chr05 64 865 476353 477154 F 802 99.75 1463 accept_chi 0 ALIGNMENT 760 YS2-17a05.q1k chr05 831 30 476353 477154 C 802 99.63 833 accept_chi 1 ALIGNMENT 0 YS2-17a05.p1k vc_2 883 77 2106 2105 C 807 0.00 1463 reject_low 3 ALIGNMENT 0 YS2-17a05.p1k vc_7 77 883 13562 13561 F 807 0.00 1463 reject_low 8 ALIGNMENT 223 YS2-17a05.p1k vc_7 884 1224 13562 13900 F 341 89.44 1463 reject_low 8 ALIGNMENT 223 YS2-17a05.p1k vc_1 1224 884 1767 2105 C 341 89.44 1463 reject_low 2 ALIGNMENT 0 YS2-17a05.p1k vc_3 883 77 2473 2472 C 807 0.00 1463 reject_low 10 ALIGNMENT 0 YS2-17a05.p1k vc_4 77 883 5871 5870 F 807 0.00 1463 reject_low 5 ALIGNMENT 0 YS2-17a05.p1k vc_5 883 77 5026 5025 C 807 0.00 1463 reject_low 6 ALIGNMENT 223 YS2-17a05.p1k vc_5 1224 884 4687 5025 C 341 89.44 1463 reject_low 6 ALIGNMENT 223 YS2-17a05.p1k vc_4 884 1224 5871 6209 F 341 89.44 1463 reject_low 5 ALIGNMENT 223 YS2-17a05.p1k vc_7 884 1224 100 438 F 341 89.44 1463 reject_low 7 ALIGNMENT 0 YS2-17a05.p1k vc_3 883 77 2106 2105 C 807 0.00 1463 reject_low 4 ALIGNMENT 26 YS2-17a05.p1k vc_3 914 884 2441 2472 C 31 96.77 1463 reject_low 10 ALIGNMENT 0 YS2-17a05.p1k vc_1 883 77 2473 2472 C 807 0.00 1463 reject_low 9 ALIGNMENT 0 YS2-17a06.q1k vc_5 357 62 37 36 C 296 0.00 396 reject_low 7 ALIGNMENT 0 YS2-17a06.q1k vc_1 355 62 2513 2512 C 294 0.00 396 reject_low 2 ALIGNMENT 0 YS2-17a06.q1k vc_3 355 62 2513 2512 C 294 0.00 396 reject_low 3 ALIGNMENT 39 YS2-17a06.q1k vc_5 396 358 5025 5063 C 39 100.00 396 reject_low 5 ALIGNMENT 36 YS2-17a06.q1k vc_5 393 358 1 36 C 36 100.00 396 reject_low 7 ALIGNMENT 38 YS2-17a06.q1k vc_7 359 396 13525 13562 F 38 100.00 396 reject_low 6 ALIGNMENT 41 YS2-17a06.q1k vc_3 396 356 2472 2512 C 41 100.00 396 reject_low 3 ALIGNMENT 0 YS2-17a06.q1k vc_4 62 355 5831 5830 F 294 0.00 396 reject_low 4 ALIGNMENT 0 YS2-17a06.p1k chr14 364 346 636585 636584 C 19 0.00 364 accept_chi 0 ALIGNMENT 0 YS2-17a06.q1k vc_5 357 62 5064 5063 C 296 0.00 396 reject_low 5 ALIGNMENT 309 YS2-17a06.p1k chr14 345 24 636584 636905 C 322 99.38 364 accept_chi 0 ALIGNMENT 0 YS2-17a06.q1k vc_7 62 358 13525 13524 F 297 0.00 396 reject_low 6 ALIGNMENT 41 YS2-17a06.q1k vc_1 396 356 2472 2512 C 41 100.00 396 reject_low 2 ALIGNMENT 305 YS2-17a06.q1k chr14 39 360 636584 636906 F 322 99.07 396 accept_chi 1 ALIGNMENT 41 YS2-17a06.q1k vc_4 356 396 5831 5871 F 41 100.00 396 reject_low 4 ALIGNMENT 0 YS2-17a06.q1k chr14 361 396 636906 636905 F 36 0.00 396 accept_chi 1 ALIGNMENT 1014 YS2-17a07.p1k chr09 1183 25 94103 95260 C 1159 96.89 1360 accept 0 ALIGNMENT 1002 YS2-17a07.q1k chr09 38 1257 90647 91875 F 1220 94.92 1339 accept 0 ALIGNMENT 926 YS2-17a08.p1k chr09 1141 33 94134 95260 C 1109 95.85 1369 accept 0 ALIGNMENT 1023 YS2-17a08.q1k chr09 37 1214 90647 91832 F 1178 96.18 1391 accept 0 ALIGNMENT 862 YS2-17a09.p1k chr16 63 1274 888287 889488 F 1212 91.67 1472 accept 0 ALIGNMENT 958 YS2-17a09.q1k chr16 1144 38 892923 894048 C 1107 96.84 1332 accept 0 ALIGNMENT 364 YS2-17a10.q1k chr02 45 840 618613 619398 F 796 83.04 1430 accept 0 ALIGNMENT 881 YS2-17a11.q1k chr08 1124 39 453216 454303 C 1086 94.75 1331 accept 0 ALIGNMENT 1031 YS2-17a11.p1k chr08 31 1199 449807 450987 F 1169 97.09 1358 accept 0 ALIGNMENT 999 YS2-17a12.q1k chr13 41 1200 456558 457731 F 1160 96.90 1410 accept 0 ALIGNMENT 1011 YS2-17a12.p1k chr13 1211 31 460711 461905 C 1181 96.70 1401 accept 0 ALIGNMENT 0 YS2-17a13.q1k chrm 817 388 67999 67998 C 430 0.00 1346 reject_low 1 ALIGNMENT 30 YS2-17a13.q1k chrm 364 327 72792 72829 C 38 97.37 1346 reject_low 4 ALIGNMENT 0 YS2-17a13.q1k chrm 101 319 77054 77053 F 219 0.00 1346 reject_low 2 ALIGNMENT 0 YS2-17a13.q1k chrm 365 817 77098 77097 F 453 0.00 1346 reject_low 2 ALIGNMENT 0 YS2-17a13.q1k chrm 326 101 72830 72829 C 226 0.00 1346 reject_low 4 ALIGNMENT 32 YS2-17a13.q1k chrm 364 326 6192 6230 C 39 97.44 1346 reject_low 3 ALIGNMENT 0 YS2-17a13.q1k chrm 321 101 68063 68062 C 221 0.00 1346 reject_low 1 ALIGNMENT 293 YS2-17a13.q1k chrm 681 1153 25183 25661 F 473 92.60 1346 reject_bad_break 0 ALIGNMENT 0 YS2-17a13.q1k chrm 325 101 6231 6230 C 225 0.00 1346 reject_low 3 ALIGNMENT 499 YS2-17a13.q1k chrm 41 643 24582 25184 F 603 98.67 1346 reject_bad_break 0 ALIGNMENT 43 YS2-17a13.q1k chrm 387 322 67998 68062 C 66 89.39 1346 reject_low 1 ALIGNMENT 0 YS2-17a13.q1k chrm 817 365 72793 72792 C 453 0.00 1346 reject_low 4 ALIGNMENT 35 YS2-17a13.q1k chrm 320 364 77054 77098 F 45 93.33 1346 reject_low 2 ALIGNMENT 674 YS2-17a13.p1k chrm 1245 124 25855 26959 C 1122 92.34 1479 reject_bad_break 0 ALIGNMENT 0 YS2-17a13.q1k chrm 817 365 6193 6192 C 453 0.00 1346 reject_low 3 ALIGNMENT 0 YS2-17a13.q1k chrm 644 680 25185 25182 F 37 0.00 1346 reject_bad_break 0 ALIGNMENT 0 YS2-17a14.q1k chr16 758 62 62718 62717 C 697 0.00 1371 reject_low 35 ALIGNMENT 267 YS2-17a14.q1k chr03 1085 756 90437 90768 C 330 95.45 1371 reject_low 33 ALIGNMENT 0 YS2-17a14.p1k chr04 861 77 668432 668431 C 785 0.00 1454 reject_low 21 ALIGNMENT 261 YS2-17a14.q1k chr05 1065 759 449317 449623 C 307 96.74 1371 reject_low 5 ALIGNMENT 25 YS2-17a14.q1k chr04 772 821 871760 871810 F 50 88.00 1371 reject_low 55 ALIGNMENT 0 YS2-17a14.q1k chr05 758 62 449624 449623 C 697 0.00 1371 reject_low 5 ALIGNMENT 183 YS2-17a14.p1k chr04 862 1114 645235 645491 F 253 92.09 1454 reject_low 25 ALIGNMENT 0 YS2-17a14.q1k chr03 756 765 168473 168604 F 10 0.00 1371 reject_low 7 ALIGNMENT 0 YS2-17a14.q1k chr01 62 765 165837 165836 F 704 0.00 1371 reject_low 44 ALIGNMENT 0 YS2-17a14.q1k chr14 765 62 525054 525053 C 704 0.00 1371 reject_low 42 ALIGNMENT 189 YS2-17a14.p1k chr05 862 1114 434627 434883 F 253 92.49 1454 reject_low 5 ALIGNMENT 72 YS2-17a14.q1k chr03 669 755 168386 168472 F 87 96.55 1371 reject_low 4,7 ALIGNMENT 67 YS2-17a14.q1k chr03 1086 766 151517 151838 C 321 77.26 1371 reject_low 48 ALIGNMENT 0 YS2-17a14.q1k chr12 62 758 976257 976256 F 697 0.00 1371 reject_low 31 ALIGNMENT 185 YS2-17a14.p1k chr15 1114 862 854357 854612 C 253 92.49 1454 reject_low 23 ALIGNMENT 0 YS2-17a14.q1k chr04 753 62 877777 877776 C 692 0.00 1371 reject_low 27 ALIGNMENT 0 YS2-17a14.p1k chr04 77 861 645235 645234 F 785 0.00 1454 reject_low 25 ALIGNMENT 255 YS2-17a14.q1k chr03 1085 756 84294 84625 C 330 94.24 1371 reject_low 39 ALIGNMENT 184 YS2-17a14.p1k chr07 862 1114 319426 319681 F 253 91.70 1454 reject_low 24 ALIGNMENT 0 YS2-17a14.q1k chr03 656 943 151357 151356 F 288 0.00 1371 reject_low 6 ALIGNMENT 0 YS2-17a14.p1k chr11 77 861 202290 202289 F 785 0.00 1454 reject_low 13 ALIGNMENT 30 YS2-17a14.q1k chr16 1036 937 62726 62826 C 100 80.00 1371 reject_low 52 ALIGNMENT 24 YS2-17a14.q1k chr04 1047 949 1352962 1353061 C 99 77.78 1371 reject_low 53 ALIGNMENT 0 YS2-17a14.q1k chr03 62 668 168386 168385 F 607 0.00 1371 reject_low 4,7 ALIGNMENT 0 YS2-17a14.q1k chr03 765 62 151839 151838 C 704 0.00 1371 reject_low 48 ALIGNMENT 191 YS2-17a14.p1k chr07 1114 861 736071 736328 C 254 92.91 1454 reject_low 15 ALIGNMENT 42 YS2-17a14.q1k chr03 866 779 84626 84715 C 88 85.23 1371|2,0 reject_low 54 ALIGNMENT 190 YS2-17a14.p1k chr04 861 1114 945948 946205 F 254 92.52 1454 reject_low 17 ALIGNMENT 0 YS2-17a14.q1k chr03 864 865 84291 84627 C 0 0.00 1371 reject_low 54 ALIGNMENT 231 YS2-17a14.q1k chr14 1085 766 524730 525053 C 320 92.81 1371 reject_low 42 ALIGNMENT 279 YS2-17a14.q1k chr07 756 1085 568745 569076 F 330 96.67 1371 reject_low 28 ALIGNMENT 86 YS2-17a14.q1k chr01 656 755 182601 182702 F 100 98.00 1371 reject_low 3 ALIGNMENT 189 YS2-17a14.p1k chr16 1114 862 769401 769657 C 253 92.89 1454 reject_low 19 ALIGNMENT 0 YS2-17a14.q1k chr05 653 755 135499 135607 F 103 0.00 1371 reject_low 26 ALIGNMENT 0 YS2-17a14.q1k chr14 765 62 519488 519487 C 704 0.00 1371 reject_low 41 ALIGNMENT 270 YS2-17a14.q1k chr05 1085 759 487829 488157 C 327 96.02 1371 reject_low 34 ALIGNMENT 0 YS2-17a14.p1k chr09 861 77 210645 210644 C 785 0.00 1454 reject_low 12 ALIGNMENT 0 YS2-17a14.q1k chr05 62 570 135417 135416 F 509 0.00 1371 reject_low 26 ALIGNMENT 0 YS2-17a14.q1k chr04 758 249 1352963 1352967 C 510 0.00 1371 reject_low 38 ALIGNMENT 0 YS2-17a14.q1k chr03 62 811 142803 142802 F 750 0.00 1371 reject_low 51 ALIGNMENT 172 YS2-17a14.q1k chr01 766 1085 165837 166163 F 320 86.88 1371 reject_low 44 ALIGNMENT 0 YS2-17a14.q1k chr01 62 765 160249 160248 F 704 0.00 1371 reject_low 43 ALIGNMENT 0 YS2-17a14.q1k chr13 758 62 768876 768875 C 697 0.00 1371 reject_low 32 ALIGNMENT 56 YS2-17a14.q1k chr03 1054 779 149513 149784 C 276 76.81 1371 reject_low 50 ALIGNMENT 187 YS2-17a14.p1k chr08 861 1114 146323 146580 F 254 92.13 1454 reject_low 20 ALIGNMENT 0 YS2-17a14.q1k chr04 761 62 872142 872141 C 700 0.00 1371 reject_low 37 ALIGNMENT 0 YS2-17a14.q1k chr16 943 889 62242 62241 C 55 0.00 1371 reject_low 49 ALIGNMENT 0 YS2-17a14.p1k chr16 861 77 769658 769657 C 785 0.00 1454 reject_low 19 ALIGNMENT 0 YS2-17a14.p1k chr05 77 861 249929 249928 F 785 0.00 1454 reject_low 22 ALIGNMENT 0 YS2-17a14.q1k chr14 62 770 726630 726629 F 709 0.00 1371 reject_low 40 ALIGNMENT 0 YS2-17a14.q1k chr05 62 914 449144 449143 F 853 0.00 1371 reject_low 45 ALIGNMENT 0 YS2-17a14.q1k chr04 758 62 987121 987120 C 697 0.00 1371 reject_low 30 ALIGNMENT 0 YS2-17a14.q1k chr03 756 943 168472 168471 F 188 0.00 1371 reject_low 4 ALIGNMENT 69 YS2-17a14.q1k chr03 766 1085 124141 124462 F 320 77.19 1371 reject_low 47 ALIGNMENT 199 YS2-17a14.p1k chr07 1114 862 712294 712549 C 253 94.07 1454 reject_low 11 ALIGNMENT 0 YS2-17a14.q1k chr04 758 62 981494 981493 C 697 0.00 1371 reject_low 9 ALIGNMENT 274 YS2-17a14.q1k chr04 1086 759 1352633 1352962 C 328 96.34 1371 reject_low 38 ALIGNMENT 190 YS2-17a14.p1k chr14 1114 861 726319 726576 C 254 92.52 1454 reject_low 18 ALIGNMENT 0 YS2-17a14.q1k chr05 758 62 488158 488157 C 697 0.00 1371 reject_low 34 ALIGNMENT 0 YS2-17a14.q1k chr03 755 62 84626 84625 C 694 0.00 1371 reject_low 39 ALIGNMENT 199 YS2-17a14.p1k chr11 862 1114 202290 202545 F 253 93.68 1454 reject_low 13 ALIGNMENT 0 YS2-17a14.p1k chr07 860 77 736329 736328 C 784 0.00 1454 reject_low 15 ALIGNMENT 0 YS2-17a14.q1k chr04 62 771 871760 871759 F 710 0.00 1371 reject_low 55 ALIGNMENT 961 YS2-17a14.p1k chr09 1114 67 205301 206351 C 1048 98.09 1454 ambiguous_trans 0 ALIGNMENT 186 YS2-17a14.p1k chr04 1114 862 668175 668431 C 253 92.49 1454 reject_low 21 ALIGNMENT 268 YS2-17a14.q1k chr12 1086 756 941188 941520 C 331 95.47 1371 reject_low 29 ALIGNMENT 717 YS2-17a14.q1k chr05 38 1085 435199 436273 F 1048 91.32 1371 accept 2 ALIGNMENT 0 YS2-17a14.q1k chr01 62 655 182601 182600 F 594 0.00 1371 reject_low 3 ALIGNMENT 0 YS2-17a14.p1k chr01 861 77 182954 182953 C 785 0.00 1454 reject_low 3 ALIGNMENT 0 YS2-17a14.q1k chr12 755 62 941521 941520 C 694 0.00 1371 reject_low 29 ALIGNMENT 0 YS2-17a14.q1k chr04 822 827 871811 877781 F 6 0.00 1371 reject_low 55 ALIGNMENT 0 YS2-17a14.q1k chr16 765 62 62366 62365 C 704 0.00 1371 reject_low 49 ALIGNMENT 65 YS2-17a14.q1k chr16 888 766 62241 62365 C 123 85.37 1371 reject_low 49 ALIGNMENT 232 YS2-17a14.q1k chr14 1086 766 519163 519487 C 321 92.83 1371 reject_low 41 ALIGNMENT 0 YS2-17a14.p1k chr04 77 860 945948 945947 F 784 0.00 1454 reject_low 17 ALIGNMENT 270 YS2-17a14.q1k chr16 1085 759 62389 62717 C 327 96.02 1371 reject_low 35 ALIGNMENT 276 YS2-17a14.q1k chr05 756 1085 135608 135939 F 330 96.36 1371 reject_low 26 ALIGNMENT 75 YS2-17a14.p1k chr03 1114 991 168468 168595 C 124 87.90 1454 reject_low 4 ALIGNMENT 276 YS2-17a14.q1k chr04 1091 759 981159 981493 C 333 96.10 1371 reject_low 9 ALIGNMENT 0 YS2-17a14.q1k chr03 755 62 90769 90768 C 694 0.00 1371 reject_low 33 ALIGNMENT 0 YS2-17a14.q1k chr07 62 755 568745 568744 F 694 0.00 1371 reject_low 28 ALIGNMENT 0 YS2-17a14.q1k chr04 653 943 1352529 1352528 F 291 0.00 1371 reject_low 8 ALIGNMENT 267 YS2-17a14.q1k chr04 1085 762 871816 872141 C 324 95.99 1371 reject_low 37 ALIGNMENT 0 YS2-17a14.q1k chr03 62 765 124141 124140 F 704 0.00 1371 reject_low 47 ALIGNMENT 0 YS2-17a14.q1k chr04 62 570 1352448 1352447 F 509 0.00 1371 reject_low 8 ALIGNMENT 119 YS2-17a14.p1k chr03 996 862 168929 169063 C 135 97.04 1454 reject_low 7 ALIGNMENT 273 YS2-17a14.q1k chr12 759 1085 976257 976585 F 327 96.33 1371 reject_low 31 ALIGNMENT 0 YS2-17a14.q1k chr01 756 943 182702 182701 F 188 0.00 1371 reject_low 3 ALIGNMENT 194 YS2-17a14.p1k chr05 861 1115 492433 492691 F 255 92.94 1454 reject_low 10 ALIGNMENT 196 YS2-17a14.p1k chr14 1114 862 546823 547078 C 253 93.68 1454 reject_low 14 ALIGNMENT 0 YS2-17a14.p1k chr07 77 861 319426 319425 F 785 0.00 1454 reject_low 24 ALIGNMENT 119 YS2-17a14.q1k chr04 779 930 987167 987320 F 152 94.74 1371 reject_low 46 ALIGNMENT 0 YS2-17a14.p1k chr14 861 77 547079 547078 C 785 0.00 1454 reject_low 14 ALIGNMENT 78 YS2-17a14.q1k chr04 571 652 1352448 1352529 F 82 98.78 1371 reject_low 8 ALIGNMENT 192 YS2-17a14.p1k chr16 1114 862 856625 856881 C 253 93.28 1454 reject_low 16 ALIGNMENT 39 YS2-17a14.q1k chr04 248 75 1352968 1353138 C 174 77.59 1371 reject_low 38 ALIGNMENT 23 YS2-17a14.q1k chr04 828 998 877782 877950 F 171 75.44 1371 reject_low 55 ALIGNMENT 0 YS2-17a14.p1k chr14 860 77 726577 726576 C 784 0.00 1454 reject_low 18 ALIGNMENT 186 YS2-17a14.p1k chr05 862 1114 249929 250185 F 253 92.09 1454 reject_low 22 ALIGNMENT 0 YS2-17a14.q1k chr03 755 62 85142 85141 C 694 0.00 1371 reject_low 36 ALIGNMENT 0 YS2-17a14.q1k chr04 62 778 987167 987166 F 717 0.00 1371 reject_low 46 ALIGNMENT 81 YS2-17a14.q1k chr05 571 652 135417 135498 F 82 100.00 1371 reject_low 26 ALIGNMENT 273 YS2-17a14.q1k chr13 1085 759 768547 768875 C 327 96.33 1371 reject_low 32 ALIGNMENT 85 YS2-17a14.q1k chr03 571 655 151273 151357 F 85 100.00 1371 reject_low 6 ALIGNMENT 135 YS2-17a14.q1k chr03 1029 862 84126 84293 C 168 95.83 1371|0,3 reject_low 54 ALIGNMENT 261 YS2-17a14.q1k chr03 1085 756 84810 85141 C 330 94.85 1371 reject_low 36 ALIGNMENT 172 YS2-17a14.q1k chr01 766 1085 160249 160575 F 320 86.88 1371 reject_low 43 ALIGNMENT 199 YS2-17a14.p1k chr01 1114 862 182698 182953 C 253 94.07 1454 reject_low 3 ALIGNMENT 237 YS2-17a14.q1k chr03 766 1085 168605 168928 F 320 93.44 1371 reject_low 7 ALIGNMENT 0 YS2-17a14.q1k chr03 62 570 151273 151272 F 509 0.00 1371 reject_low 6 ALIGNMENT 0 YS2-17a14.q1k chr04 948 62 1353062 1353061 C 887 0.00 1371 reject_low 53 ALIGNMENT 0 YS2-17a14.p1k chr16 861 77 856882 856881 C 785 0.00 1454 reject_low 16 ALIGNMENT 0 YS2-17a14.p1k chr03 990 77 168596 168595 C 914 0.00 1454 reject_low 4 ALIGNMENT 0 YS2-17a14.q1k chr03 778 62 149785 149784 C 717 0.00 1371 reject_low 50 ALIGNMENT 0 YS2-17a14.q1k chr03 778 62 84716 84715 C 717 0.00 1371 reject_low 54 ALIGNMENT 0 YS2-17a14.p1k chr15 861 77 854613 854612 C 785 0.00 1454 reject_low 23 ALIGNMENT 0 YS2-17a14.p1k chr05 77 861 434627 434626 F 785 0.00 1454 reject_low 5 ALIGNMENT 0 YS2-17a14.p1k chr07 861 77 712550 712549 C 785 0.00 1454 reject_low 11 ALIGNMENT 0 YS2-17a14.q1k chr16 936 62 62827 62826 C 875 0.00 1371 reject_low 52 ALIGNMENT 258 YS2-17a14.q1k chr14 771 1085 726630 726946 F 315 95.87 1371 reject_low 40 ALIGNMENT 199 YS2-17a14.p1k chr09 1114 862 210389 210644 C 253 94.07 1454 reject_low 12 ALIGNMENT 272 YS2-17a14.q1k chr04 1085 754 877443 877776 C 332 95.78 1371 reject_low 27 ALIGNMENT 0 YS2-17a14.p1k chr03 861 77 169064 169063 C 785 0.00 1454 reject_low 7 ALIGNMENT 0 YS2-17a14.p1k chr08 77 860 146323 146322 F 784 0.00 1454 reject_low 20 ALIGNMENT 273 YS2-17a14.q1k chr04 1085 759 986792 987120 C 327 96.33 1371 reject_low 30 ALIGNMENT 120 YS2-17a14.q1k chr05 915 1085 449144 449316 F 171 92.98 1371 reject_low 45 ALIGNMENT 0 YS2-17a14.p1k chr05 77 860 492433 492432 F 784 0.00 1454 reject_low 10 ALIGNMENT 32 YS2-17a14.q1k chr03 812 1086 142803 143078 F 275 73.82 1371 reject_low 51 ALIGNMENT 955 YS2-17a14.p1k chr07 1114 67 707283 708333 C 1048 97.90 1454 ambiguous_trans 1 ALIGNMENT 21 YS2-17a15.q1k chr02 175 138 272547 272584 C 38 89.47 1354 reject_low 4 ALIGNMENT 1024 YS2-17a15.q1k chr06 1199 40 223547 224702 C 1160 97.07 1354 accept 0 ALIGNMENT 0 YS2-17a15.q1k chr08 867 185 365414 365413 C 683 0.00 1354 reject_low 1 ALIGNMENT 22 YS2-17a15.q1k chr07 153 195 394460 394502 F 43 88.37 1354 reject_low 3 ALIGNMENT 0 YS2-17a15.q1k chr07 196 867 394502 394501 F 672 0.00 1354 reject_low 3 ALIGNMENT 0 YS2-17a15.q1k chr07 62 152 394460 394459 F 91 0.00 1354 reject_low 3 ALIGNMENT 0 YS2-17a15.q1k chr08 128 62 365430 365429 C 67 0.00 1354 reject_low 2 ALIGNMENT 965 YS2-17a15.p1k chr06 61 1216 219506 220672 F 1156 95.50 1378 accept 0 ALIGNMENT 0 YS2-17a15.q1k chr08 130 62 365467 365466 C 69 0.00 1354 reject_low 1 ALIGNMENT 0 YS2-17a15.q1k chr02 867 176 272548 272547 C 692 0.00 1354 reject_low 4 ALIGNMENT 29 YS2-17a15.q1k chr08 184 131 365413 365466 C 54 88.89 1354 reject_low 1 ALIGNMENT 0 YS2-17a15.q1k chr02 137 62 272585 272584 C 76 0.00 1354 reject_low 4 ALIGNMENT 24 YS2-17a15.q1k chr08 187 129 365371 365429 C 59 84.75 1354 reject_low 2 ALIGNMENT 0 YS2-17a15.q1k chr08 867 188 365372 365371 C 680 0.00 1354 reject_low 2 ALIGNMENT 38 YS2-17a16.q1k vc_7 322 359 13525 13562 F 38 100.00 359 reject_low 10 ALIGNMENT 36 YS2-17a16.q1k vc_5 356 321 1 36 C 36 100.00 359 reject_low 11 ALIGNMENT 41 YS2-17a16.q1k vc_3 359 319 2472 2512 C 41 100.00 359 reject_low 7 ALIGNMENT 0 YS2-17a16.q1k vc_1 318 62 2513 2512 C 257 0.00 359 reject_low 6 ALIGNMENT 0 YS2-17a16.q1k vc_5 320 62 5064 5063 C 259 0.00 359 reject_low 9 ALIGNMENT 0 YS2-17a16.q1k vc_3 318 62 2513 2512 C 257 0.00 359 reject_low 7 ALIGNMENT 0 YS2-17a16.q1k vc_7 62 321 13525 13524 F 260 0.00 359 reject_low 10 ALIGNMENT 203 YS2-17a16.p1k vc_3 542 2 1331 1874 C 541 79.48 867 reject_vc 3 ALIGNMENT 0 YS2-17a16.q1k vc_4 62 318 5831 5830 F 257 0.00 359 reject_low 8 ALIGNMENT 203 YS2-17a16.p1k vc_5 542 2 4251 4794 C 541 79.48 867 reject_vc 4 ALIGNMENT 39 YS2-17a16.q1k vc_5 359 321 5025 5063 C 39 100.00 359 reject_low 9 ALIGNMENT 203 YS2-17a16.p1k vc_1 542 2 1331 1874 C 541 79.48 867 reject_vc 1 ALIGNMENT 41 YS2-17a16.q1k vc_1 359 319 2472 2512 C 41 100.00 359 reject_low 6 ALIGNMENT 203 YS2-17a16.p1k vc_2 542 2 1331 1874 C 541 79.48 867 reject_vc 2 ALIGNMENT 41 YS2-17a16.q1k vc_4 319 359 5831 5871 F 41 100.00 359 reject_low 8 ALIGNMENT 0 YS2-17a16.q1k vc_5 320 62 37 36 C 259 0.00 359 reject_low 11 ALIGNMENT 0 YS2-17a16.q1k chr14 359 319 176574 176573 C 41 0.00 359 accept 0 ALIGNMENT 203 YS2-17a16.p1k vc_6 2 542 3587 4130 F 541 79.48 867 reject_vc 5 ALIGNMENT 256 YS2-17a16.q1k chr14 318 39 176573 176852 C 280 99.29 359 accept 0 ALIGNMENT 41 YS2-17a17.q1k vc_3 334 294 2472 2512 C 41 100.00 334 reject_low 3 ALIGNMENT 0 YS2-17a17.q1k vc_1 293 77 2513 2512 C 217 0.00 334 reject_low 2 ALIGNMENT 252 YS2-17a17.p1k chr08 29 300 357216 357488 F 272 98.53 318 accept_chi 0 ALIGNMENT 39 YS2-17a17.q1k vc_5 334 296 5025 5063 C 39 100.00 334 reject_low 5 ALIGNMENT 0 YS2-17a17.q1k chr08 334 295 357217 357216 C 40 0.00 334 accept_chi 1 ALIGNMENT 0 YS2-17a17.p1k chr08 301 318 357488 357487 F 18 0.00 318 accept_chi 0 ALIGNMENT 36 YS2-17a17.q1k vc_5 331 296 1 36 C 36 100.00 334 reject_low 7 ALIGNMENT 41 YS2-17a17.q1k vc_1 334 294 2472 2512 C 41 100.00 334 reject_low 2 ALIGNMENT 0 YS2-17a17.q1k vc_5 295 77 37 36 C 219 0.00 334 reject_low 7 ALIGNMENT 41 YS2-17a17.q1k vc_4 294 334 5831 5871 F 41 100.00 334 reject_low 4 ALIGNMENT 0 YS2-17a17.q1k vc_3 293 77 2513 2512 C 217 0.00 334 reject_low 3 ALIGNMENT 0 YS2-17a17.q1k vc_7 77 296 13525 13524 F 220 0.00 334 reject_low 6 ALIGNMENT 0 YS2-17a17.q1k vc_5 295 77 5064 5063 C 219 0.00 334 reject_low 5 ALIGNMENT 229 YS2-17a17.q1k chr08 294 29 357216 357486 C 266 96.99 334 accept_chi 1 ALIGNMENT 0 YS2-17a17.q1k vc_4 77 293 5831 5830 F 217 0.00 334 reject_low 4 ALIGNMENT 38 YS2-17a17.q1k vc_7 297 334 13525 13562 F 38 100.00 334 reject_low 6 ALIGNMENT 590 YS2-17a18.p1k vc_7 320 1154 100 944 F 835 91.02 1339 reject_vc 1 ALIGNMENT 269 YS2-17a18.q1k vc_2 1 303 2322 2624 F 303 96.37 858 reject_low 11 ALIGNMENT 323 YS2-17a18.p1k vc_4 320 675 5871 6226 F 356 97.19 1339 reject_low 9 ALIGNMENT 0 YS2-17a18.q1k vc_7 53 54 5172 6360 C 0 0.00 858 reject_low 13 ALIGNMENT 0 YS2-17a18.p1k vc_7 77 319 100 99 F 243 0.00 1339 reject_vc 1 ALIGNMENT 49 YS2-17a18.q1k vc_4 304 238 46 112 C 67 92.54 858 reject_low 15 ALIGNMENT 0 YS2-17a18.p1k vc_4 77 319 5871 5870 F 243 0.00 1339 reject_low 9 ALIGNMENT 0 YS2-17a18.p1k vc_7 77 319 13562 13561 F 243 0.00 1339 reject_low 6 ALIGNMENT 0 YS2-17a18.q1k vc_7 304 304 4700 4921 C 1 0.00 858 reject_low 13 ALIGNMENT 142 YS2-17a18.q1k vc_4 308 546 1879 2123 F 239 89.12 858 reject_low 14 ALIGNMENT 0 YS2-17a18.p1k vc_3 319 77 2473 2472 C 243 0.00 1339 reject_low 17 ALIGNMENT 269 YS2-17a18.q1k vc_3 1 303 2689 2991 F 303 96.37 858 reject_low 12 ALIGNMENT 49 YS2-17a18.q1k vc_4 238 304 1548 1614 F 67 92.54 858 reject_low 14 ALIGNMENT 596 YS2-17a18.p1k vc_2 1154 320 1261 2105 C 835 91.26 1339 reject_low 4 ALIGNMENT 0 YS2-17a18.p1k vc_1 445 351 2442 2441 C 95 0.00 1339 reject_low 16 ALIGNMENT 0 YS2-17a18.q1k vc_4 305 307 1615 1878 F 3 0.00 858 reject_low 14 ALIGNMENT 419 YS2-17a18.q1k vc_7 546 1 2018 2569 C 546 93.22 858 reject_vc 1 ALIGNMENT 387 YS2-17a18.p1k vc_6 548 1182 3585 4231 F 635 88.19 1339 reject_low 7 ALIGNMENT 23 YS2-17a18.p1k vc_3 350 320 2441 2472 C 31 93.55 1339 reject_low 17 ALIGNMENT 0 YS2-17a18.p1k vc_6 77 547 3585 3584 F 471 0.00 1339 reject_low 7 ALIGNMENT 0 YS2-17a18.p1k vc_1 319 77 2473 2472 C 243 0.00 1339 reject_low 16 ALIGNMENT 598 YS2-17a18.p1k vc_5 1182 320 4150 5025 C 863 90.61 1339 reject_vc 0 ALIGNMENT 0 YS2-17a18.p1k vc_2 319 77 2106 2105 C 243 0.00 1339 reject_low 4 ALIGNMENT 0 YS2-17a18.p1k chr08 303 445 357488 357487 F 143 0.00 1339 reject_low 2 ALIGNMENT 49 YS2-17a18.q1k vc_4 304 238 6273 6339 C 67 92.54 858 reject_low 9 ALIGNMENT 218 YS2-17a18.q1k vc_7 303 53 4922 5172 C 251 95.62 858|0,1 reject_low 13 ALIGNMENT 87 YS2-17a18.q1k vc_7 419 305 4586 4699 C 115 93.91 858 reject_low 13 ALIGNMENT 419 YS2-17a18.q1k vc_5 1 546 2556 3107 F 546 93.22 858 reject_vc 0 ALIGNMENT 23 YS2-17a18.p1k vc_1 350 320 2441 2472 C 31 93.55 1339 reject_low 16 ALIGNMENT 269 YS2-17a18.q1k vc_1 1 303 2689 2991 F 303 96.37 858 reject_low 10 ALIGNMENT 0 YS2-17a18.p1k vc_3 445 351 2442 2441 C 95 0.00 1339 reject_low 17 ALIGNMENT 596 YS2-17a18.p1k vc_1 1154 320 1261 2105 C 835 91.26 1339 reject_low 3 ALIGNMENT 352 YS2-17a18.q1k vc_4 419 1 5235 5654 C 419 95.23 858 reject_low 8 ALIGNMENT 0 YS2-17a18.p1k vc_5 319 77 5026 5025 C 243 0.00 1339 reject_vc 0 ALIGNMENT 596 YS2-17a18.p1k vc_3 1154 320 1261 2105 C 835 91.26 1339 reject_low 5 ALIGNMENT 236 YS2-17a18.p1k chr08 34 302 357221 357488 F 269 97.03 1339 reject_low 2 ALIGNMENT 0 YS2-17a18.p1k vc_1 319 77 2106 2105 C 243 0.00 1339 reject_low 3 ALIGNMENT 0 YS2-17a18.p1k vc_3 319 77 2106 2105 C 243 0.00 1339 reject_low 5 ALIGNMENT 48 YS2-17a18.q1k vc_7 54 3 6360 6411 C 52 98.08 858|1,0 reject_low 13 ALIGNMENT 590 YS2-17a18.p1k vc_7 320 1154 13562 14406 F 835 91.02 1339 reject_low 6 ALIGNMENT 0 YS2-17a19.p1k chr12 92 1040 13974 13973 F 949 0.00 1349 reject_low 31 ALIGNMENT 0 YS2-17a19.q1k chr08 262 97 12771 12770 C 166 0.00 1332 reject_low 7 ALIGNMENT 347 YS2-17a19.p1k chr16 116 989 7883 8771 F 874 81.12 1349 reject_low 15 ALIGNMENT 276 YS2-17a19.q1k chr16 1021 276 8016 8773 C 746 80.29 1332 reject_low 15 ALIGNMENT 328 YS2-17a19.p1k chr05 567 168 63695 64090 C 400 94.75 1349 reject_low 23 ALIGNMENT 0 YS2-17a19.p1k chr13 125 92 923054 923053 C 34 0.00 1349 reject_low 17 ALIGNMENT 0 YS2-17a19.p1k chr02 136 92 809445 809444 C 45 0.00 1349 reject_low 21 ALIGNMENT 569 YS2-17a19.p1k chr11 65 1158 1704 2809 F 1094 85.19 1349 reject_low 5 ALIGNMENT 347 YS2-17a19.p1k chr15 989 116 1082370 1083258 C 874 81.12 1349 reject_low 14 ALIGNMENT 0 YS2-17a19.p1k chr01 541 893 177031 177030 F 353 0.00 1349 reject_low 28 ALIGNMENT 750 YS2-17a19.p1k chr14 1158 74 781286 782372 C 1085 90.69 1349 reject_low 9 ALIGNMENT 590 YS2-17a19.q1k chr12 109 1182 1062293 1063356 F 1074 86.50 1332 reject_low 11 ALIGNMENT 484 YS2-17a19.q1k chr09 109 960 433297 434156 F 852 86.62 1332 reject_low 18 ALIGNMENT 0 YS2-17a19.q1k chr12 262 227 13927 13973 C 36 0.00 1332 reject_low 8 ALIGNMENT 20 YS2-17a19.q1k chr12 226 189 13974 14011 C 38 86.84 1332 reject_low 8 ALIGNMENT 0 YS2-17a19.p1k chr01 92 143 176631 176630 F 52 0.00 1349 reject_low 28 ALIGNMENT 699 YS2-17a19.p1k chr12 1158 65 1062293 1063377 C 1094 89.40 1349 reject_low 10 ALIGNMENT 521 YS2-17a19.p1k chr03 1158 76 307166 308259 C 1083 84.12 1349 reject_low 16 ALIGNMENT 0 YS2-17a19.q1k chr02 97 691 809006 809005 F 595 0.00 1332 reject_low 26 ALIGNMENT 126 YS2-17a19.q1k chr12 727 1087 94736 95102 F 361 80.06 1332 reject_low 29 ALIGNMENT 0 YS2-17a19.p1k chr16 92 1028 8819 8818 F 937 0.00 1349 reject_low 30 ALIGNMENT 258 YS2-17a19.q1k chr13 276 1030 922175 922938 F 755 79.60 1332 reject_low 17 ALIGNMENT 0 YS2-17a19.p1k chr15 115 92 1083259 1083258 C 24 0.00 1349 reject_low 14 ALIGNMENT 0 YS2-17a19.p1k chr08 92 136 11890 11889 F 45 0.00 1349 reject_low 7 ALIGNMENT 0 YS2-17a19.q1k chr13 97 275 922175 922174 F 179 0.00 1332 reject_low 17 ALIGNMENT 0 YS2-17a19.q1k chr12 97 726 94736 94735 F 630 0.00 1332 reject_low 29 ALIGNMENT 0 YS2-17a19.p1k chr07 893 576 1080268 1080267 C 318 0.00 1349 reject_low 22 ALIGNMENT 0 YS2-17a19.p1k chr16 92 115 7883 7882 F 24 0.00 1349 reject_low 15 ALIGNMENT 0 YS2-17a19.p1k chr09 108 92 434356 434355 C 17 0.00 1349 reject_low 13 ALIGNMENT 0 YS2-17a19.q1k chr02 266 97 8446 8445 C 170 0.00 1332 reject_low 4 ALIGNMENT 0 YS2-17a19.p1k chr05 893 568 63696 63695 C 326 0.00 1349 reject_low 23 ALIGNMENT 20 YS2-17a19.p1k chr12 1041 1078 13974 14011 F 38 86.84 1349 reject_low 31 ALIGNMENT 621 YS2-17a19.q1k chr10 1102 109 8776 9766 C 994 88.53 1332 reject_low 2 ALIGNMENT 391 YS2-17a19.p1k chr04 892 65 1522867 1523703 C 828 83.82 1349 reject_low 20 ALIGNMENT 526 YS2-17a19.q1k chr02 1179 267 7528 8445 C 913 87.19 1332 reject_low 4 ALIGNMENT 510 YS2-17a19.q1k chr12 1131 263 13053 13926 C 869 87.23 1332 reject_low 8 ALIGNMENT 279 YS2-17a19.q1k chr15 276 1035 1082368 1083138 F 760 80.26 1332 reject_low 14 ALIGNMENT 604 YS2-17a19.q1k chr07 1102 109 6290 7279 C 994 88.13 1332 reject_low 3 ALIGNMENT 0 YS2-17a19.p1k chr07 136 92 1080706 1080705 C 45 0.00 1349 reject_low 22 ALIGNMENT 21 YS2-17a19.p1k chr16 1029 1079 8819 8869 F 51 82.35 1349 reject_low 30 ALIGNMENT 0 YS2-17a19.q1k chr15 97 275 1082368 1082367 F 179 0.00 1332 reject_low 14 ALIGNMENT 621 YS2-17a19.q1k chr09 1102 109 8793 9783 C 994 88.53 1332 reject_low 1 ALIGNMENT 369 YS2-17a19.p1k chr07 575 137 1080267 1080705 C 439 94.99 1349 reject_low 22 ALIGNMENT 656 YS2-17a19.p1k chr02 65 969 7505 8414 F 905 91.82 1349 reject_low 4 ALIGNMENT 296 YS2-17a19.q1k chr04 375 1102 1522867 1523594 F 728 81.59 1332 reject_low 24 ALIGNMENT 634 YS2-17a19.q1k chr14 109 1131 781286 782310 F 1023 88.37 1332 reject_low 12 ALIGNMENT 0 YS2-17a19.p1k chr05 167 92 64091 64090 C 76 0.00 1349 reject_low 23 ALIGNMENT 677 YS2-17a19.p1k chr07 76 1158 6196 7279 F 1083 88.73 1349 reject_low 3 ALIGNMENT 272 YS2-17a19.q1k chr02 692 1135 809006 809447 F 444 88.06 1332 reject_low 26 ALIGNMENT 532 YS2-17a19.p1k chr08 137 1005 11890 12770 F 869 87.80 1349 reject_low 7 ALIGNMENT 0 YS2-17a19.q1k chr16 275 97 8774 8773 C 179 0.00 1332 reject_low 15 ALIGNMENT 0 YS2-17a19.q1k chr07 97 691 1080267 1080266 F 595 0.00 1332 reject_low 25 ALIGNMENT 0 YS2-17a19.p1k chr02 893 576 809007 809006 C 318 0.00 1349 reject_low 21 ALIGNMENT 698 YS2-17a19.p1k chr09 65 1158 8684 9783 F 1094 89.03 1349 reject_low 1 ALIGNMENT 828 YS2-17a19.p1k chr01 65 1228 1701 2865 F 1164 91.32 1349 accept 0 ALIGNMENT 444 YS2-17a19.q1k chr08 1131 263 11891 12770 C 869 84.81 1332 reject_low 7 ALIGNMENT 0 YS2-17a19.q1k chr04 97 374 1522867 1522866 F 278 0.00 1332 reject_low 24 ALIGNMENT 536 YS2-17a19.p1k chr15 74 1158 11457 12538 F 1085 84.79 1349 reject_low 6 ALIGNMENT 253 YS2-17a19.q1k chr05 700 1102 63695 64090 F 403 89.08 1332 reject_low 27 ALIGNMENT 641 YS2-17a19.p1k chr12 74 1001 12991 13923 F 928 90.52 1349 reject_low 8 ALIGNMENT 437 YS2-17a19.q1k chr03 109 949 307166 308017 F 841 85.26 1332 reject_low 19 ALIGNMENT 218 YS2-17a19.p1k chr01 144 540 176631 177031 F 397 85.89 1349 reject_low 28 ALIGNMENT 0 YS2-17a19.q1k chr12 188 97 14012 14011 C 92 0.00 1332 reject_low 8 ALIGNMENT 281 YS2-17a19.q1k chr07 692 1135 1080267 1080708 F 444 88.74 1332 reject_low 25 ALIGNMENT 698 YS2-17a19.p1k chr10 65 1158 8667 9766 F 1094 89.03 1349 reject_low 2 ALIGNMENT 760 YS2-17a19.q1k chr01 1102 38 1807 2865 C 1065 91.46 1332 accept 0 ALIGNMENT 0 YS2-17a19.q1k chr05 97 699 63695 63694 F 603 0.00 1332 reject_low 27 ALIGNMENT 471 YS2-17a19.q1k chr11 961 109 1950 2809 C 853 86.17 1332 reject_low 5 ALIGNMENT 567 YS2-17a19.p1k chr09 1158 109 433297 434355 C 1050 85.81 1349 reject_low 13 ALIGNMENT 369 YS2-17a19.p1k chr02 575 137 809006 809444 C 439 94.99 1349 reject_low 21 ALIGNMENT 430 YS2-17a19.q1k chr15 1179 109 11472 12538 C 1071 81.89 1332 reject_low 6 ALIGNMENT 322 YS2-17a19.p1k chr13 989 126 922177 923053 C 864 80.44 1349 reject_low 17 ALIGNMENT 0 YS2-17a20.q1k vc_1 236 62 2513 2512 C 175 0.00 277 reject_low 2 ALIGNMENT 39 YS2-17a20.q1k vc_5 277 239 5025 5063 C 39 100.00 277 reject_low 5 ALIGNMENT 0 YS2-17a20.q1k vc_4 62 236 5831 5830 F 175 0.00 277 reject_low 4 ALIGNMENT 38 YS2-17a20.q1k vc_7 240 277 13525 13562 F 38 100.00 277 reject_low 6 ALIGNMENT 0 YS2-17a20.q1k vc_7 62 239 13525 13524 F 178 0.00 277 reject_low 6 ALIGNMENT 41 YS2-17a20.q1k vc_4 237 277 5831 5871 F 41 100.00 277 reject_low 4 ALIGNMENT 36 YS2-17a20.q1k vc_5 274 239 1 36 C 36 100.00 277 reject_low 7 ALIGNMENT 41 YS2-17a20.q1k vc_1 277 237 2472 2512 C 41 100.00 277 reject_low 2 ALIGNMENT 0 YS2-17a20.q1k vc_3 236 62 2513 2512 C 175 0.00 277 reject_low 3 ALIGNMENT 0 YS2-17a20.q1k chr03 277 239 239184 239183 C 39 0.00 277 accept_chi 0 ALIGNMENT 41 YS2-17a20.q1k vc_3 277 237 2472 2512 C 41 100.00 277 reject_low 3 ALIGNMENT 0 YS2-17a20.q1k vc_5 238 62 37 36 C 177 0.00 277 reject_low 7 ALIGNMENT 0 YS2-17a20.p1k chr03 234 254 239388 239387 F 21 0.00 254 accept_chi 1 ALIGNMENT 202 YS2-17a20.p1k chr03 31 233 239186 239388 F 203 100.00 254 accept_chi 1 ALIGNMENT 205 YS2-17a20.q1k chr03 238 33 239183 239388 C 206 100.00 277 accept_chi 0 ALIGNMENT 0 YS2-17a20.q1k vc_5 238 62 5064 5063 C 177 0.00 277 reject_low 5 ALIGNMENT 0 YS2-17a21.q1k chr04 518 62 1150934 1150933 C 457 0.00 1257 reject_low 5 ALIGNMENT 0 YS2-17a21.q1k chr13 629 62 816907 816906 C 568 0.00 1257 manual 2 ALIGNMENT 0 YS2-17a21.p1k chr16 401 455 747699 747753 F 55 0.00 1256 reject_low 3 ALIGNMENT 0 YS2-17a21.p1k chr16 62 343 747642 747641 F 282 0.00 1256 reject_low 3 ALIGNMENT 585 YS2-17a21.q1k chr15 31 632 274184 274786 F 602 99.50 1257 manual 1 ALIGNMENT 0 YS2-17a21.q1k chr04 882 632 1150822 1150821 C 251 0.00 1257 reject_low 5 ALIGNMENT 981 YS2-17a21.p1k chr07 28 1182 668238 669398 F 1155 95.58 1256 accept_chi 0 ALIGNMENT 0 YS2-17a21.q1k chr15 633 882 274786 274785 F 250 0.00 1257 manual 1 ALIGNMENT 0 YS2-17a21.q1k chr12 62 518 784354 784353 F 457 0.00 1257 reject_low 6 ALIGNMENT 441 YS2-17a21.q1k chr13 1226 630 816307 816906 C 597 92.13 1257 manual 2 ALIGNMENT 98 YS2-17a21.q1k chr12 519 624 784354 784458 F 106 98.11 1257 reject_low 6 ALIGNMENT 0 YS2-17a21.q1k chr06 517 62 191603 191602 C 456 0.00 1257 reject_low 4 ALIGNMENT 0 YS2-17a21.q1k chr06 882 632 191490 191489 C 251 0.00 1257 reject_low 4 ALIGNMENT 0 YS2-17a21.q1k chr12 625 882 784458 784457 F 258 0.00 1257 reject_low 6 ALIGNMENT 113 YS2-17a21.q1k chr06 631 518 191489 191602 C 114 100.00 1257 reject_low 4 ALIGNMENT 100 YS2-17a21.q1k chr04 631 519 1150821 1150933 C 113 97.35 1257 reject_low 5 ALIGNMENT 24 YS2-17a21.p1k chr16 344 400 747642 747698 F 57 82.46 1256 reject_low 3 ALIGNMENT 108 YS2-17a21.p1k chr16 456 1060 747754 748358 F 605 73.39 1256 reject_low 3 ALIGNMENT 1036 YS2-17a22.q1k chr16 1257 38 457077 458309 C 1220 96.23 1320 accept 0 ALIGNMENT 1010 YS2-17a22.p1k chr16 32 1257 453251 454475 F 1226 94.94 1318 accept 0 ALIGNMENT 1000 YS2-17a23.q1k chr02 1228 41 690711 691909 C 1188 95.88 1231 accept 0 ALIGNMENT 0 YS2-17a24.q1k chr05 904 650 431497 431496 C 255 0.00 1296 reject_low 17 ALIGNMENT 59 YS2-17a24.q1k chr01 326 636 183135 183445 F 311 77.17 1296 reject_low 34 ALIGNMENT 177 YS2-17a24.q1k chr01 636 326 165850 166164 C 311 88.10 1296 reject_low 23 ALIGNMENT 21 YS2-17a24.q1k chr06 592 649 143869 143927 F 58 82.76 1296 reject_low 36 ALIGNMENT 0 YS2-17a24.q1k chr03 62 326 151518 151517 F 265 0.00 1296 reject_low 25 ALIGNMENT 0 YS2-17a24.q1k chr01 904 468 160110 160109 C 437 0.00 1296 reject_low 31 ALIGNMENT 0 YS2-17a24.q1k chr09 62 324 246215 246214 F 263 0.00 1296 reject_low 11 ALIGNMENT 0 YS2-17a24.q1k chr05 62 326 62142 62141 F 265 0.00 1296 reject_low 15 ALIGNMENT 256 YS2-17a24.q1k chr05 664 323 135603 135943 C 342 93.86 1296 reject_low 2 ALIGNMENT 0 YS2-17a24.q1k chr15 904 650 709703 709702 C 255 0.00 1296 reject_low 12 ALIGNMENT 0 YS2-17a24.q1k chr06 62 326 143535 143534 F 265 0.00 1296 reject_low 3 ALIGNMENT 0 YS2-17a24.q1k chr03 904 637 124155 124154 C 268 0.00 1296 reject_low 35 ALIGNMENT 0 YS2-17a24.q1k chr03 637 904 149784 149783 F 268 0.00 1296 reject_low 26 ALIGNMENT 0 YS2-17a24.q1k chr13 904 650 168360 168359 C 255 0.00 1296 reject_low 10 ALIGNMENT 252 YS2-17a24.q1k chr12 649 327 731680 732002 C 323 94.74 1296 reject_low 14 ALIGNMENT 0 YS2-17a24.q1k chr14 637 904 525040 525039 F 268 0.00 1296 reject_low 21 ALIGNMENT 0 YS2-17a24.q1k chr15 323 62 710028 710027 C 262 0.00 1296 reject_low 12 ALIGNMENT 246 YS2-17a24.q1k chr15 649 327 704074 704396 C 323 94.12 1296 reject_low 18 ALIGNMENT 0 YS2-17a24.q1k chr01 716 904 187490 187489 F 189 0.00 1296 reject_low 33,34 ALIGNMENT 0 YS2-17a24.q1k chr01 332 62 138991 138990 C 271 0.00 1296 reject_low 29 ALIGNMENT 0 YS2-17a24.q1k chr03 904 637 168619 168618 C 268 0.00 1296 reject_low 19 ALIGNMENT 0 YS2-17a24.q1k chr05 326 62 431819 431818 C 265 0.00 1296 reject_low 17 ALIGNMENT 259 YS2-17a24.q1k chr12 327 659 946816 947147 F 333 94.89 1296 reject_low 5 ALIGNMENT 53 YS2-17a24.q1k chr06 330 589 137658 137902 F 260 78.46 1296 reject_low 36 ALIGNMENT 70 YS2-17a24.q1k chr03 370 636 149523 149784 F 267 79.03 1296 reject_low 26 ALIGNMENT 22 YS2-17a24.q1k chr03 114 67 126318 126365 C 48 85.42 1296 reject_low 35 ALIGNMENT 0 YS2-17a24.q1k chr10 904 478 537833 537832 C 427 0.00 1296 reject_low 30 ALIGNMENT 256 YS2-17a24.q1k chr06 327 662 143535 143869 F 336 94.35 1296 reject_low 3 ALIGNMENT 0 YS2-17a24.q1k chr08 904 650 91774 91773 C 255 0.00 1296 reject_low 16 ALIGNMENT 0 YS2-17a24.q1k chr01 637 678 183446 187453 F 42 0.00 1296 reject_low 34 ALIGNMENT 0 YS2-17a24.q1k chr01 116 678 187415 187453 F 563 0.00 1296 reject_low 33 ALIGNMENT 0 YS2-17a24.q1k chr05 904 665 135604 135603 C 240 0.00 1296 reject_low 2 ALIGNMENT 0 YS2-17a24.q1k chr12 62 326 941189 941188 F 265 0.00 1296 reject_low 4 ALIGNMENT 250 YS2-17a24.q1k chr04 327 655 1352634 1352961 F 329 94.22 1296 reject_low 9 ALIGNMENT 0 YS2-17a24.q1k chr01 904 637 160263 160262 C 268 0.00 1296 reject_low 24 ALIGNMENT 0 YS2-17a24.q1k chr01 62 672 188536 188535 F 611 0.00 1296 reject_low 22 ALIGNMENT 1038 YS2-17a24.p1k chr01 1248 66 192647 193837 C 1183 96.45 1293 accept 0 ALIGNMENT 0 YS2-17a24.q1k chr14 637 904 519474 519473 F 268 0.00 1296 reject_low 20 ALIGNMENT 0 YS2-17a24.q1k chr01 716 904 188578 188577 F 189 0.00 1296 reject_low 22 ALIGNMENT 0 YS2-17a24.q1k chr01 904 637 165851 165850 C 268 0.00 1296 reject_low 23 ALIGNMENT 259 YS2-17a24.q1k chr10 327 655 538017 538344 F 329 95.14 1296 reject_low 6 ALIGNMENT 0 YS2-17a24.q1k chr10 359 62 537949 537948 C 298 0.00 1296 reject_low 30 ALIGNMENT 33 YS2-17a24.q1k chr01 52 115 187351 187414 F 64 85.94 1296 reject_low 33 ALIGNMENT 0 YS2-17a24.q1k chr04 62 366 1352962 1352961 F 305 0.00 1296 reject_low 32 ALIGNMENT 0 YS2-17a24.q1k chr13 322 62 168686 168685 C 261 0.00 1296 reject_low 10 ALIGNMENT 0 YS2-17a24.q1k chr07 656 904 811779 811778 F 249 0.00 1296 reject_low 8 ALIGNMENT 0 YS2-17a24.q1k chr03 634 904 151822 151821 F 271 0.00 1296 reject_low 25 ALIGNMENT 252 YS2-17a24.q1k chr08 649 327 389190 389512 C 323 94.74 1296 reject_low 13 ALIGNMENT 952 YS2-17a24.q1k chr01 52 1266 189145 190387 F 1215 93.99 1296 accept 0 ALIGNMENT 93 YS2-17a24.q1k chr03 327 633 151518 151822 F 307 80.46 1296 reject_low 25 ALIGNMENT 27 YS2-17a24.q1k chr01 679 715 187454 187490 F 37 91.89 1296 reject_low 33,34 ALIGNMENT 0 YS2-17a24.q1k chr14 62 326 519164 519163 F 265 0.00 1296 reject_low 20 ALIGNMENT 0 YS2-17a24.q1k chr08 904 650 389191 389190 C 255 0.00 1296 reject_low 13 ALIGNMENT 0 YS2-17a24.q1k chr07 468 904 405148 405147 F 437 0.00 1296 reject_low 1 ALIGNMENT 0 YS2-17a24.q1k chr12 904 650 731681 731680 C 255 0.00 1296 reject_low 14 ALIGNMENT 259 YS2-17a24.q1k chr12 327 659 941189 941520 F 333 94.89 1296 reject_low 4 ALIGNMENT 225 YS2-17a24.q1k chr14 327 636 524730 525040 F 310 93.23 1296 reject_low 21 ALIGNMENT 249 YS2-17a24.q1k chr05 327 649 62142 62464 F 323 94.43 1296 reject_low 15 ALIGNMENT 0 YS2-17a24.q1k chr03 326 62 143078 143077 C 265 0.00 1296 reject_low 28 ALIGNMENT 0 YS2-17a24.q1k chr03 326 115 124463 126317 C 212 0.00 1296 reject_low 35 ALIGNMENT 52 YS2-17a24.q1k chr03 608 327 142798 143077 C 282 76.24 1296 reject_low 28 ALIGNMENT 23 YS2-17a24.q1k chr01 467 374 160109 160202 C 94 76.60 1296 reject_low 31 ALIGNMENT 0 YS2-17a24.q1k chr14 62 326 524730 524729 F 265 0.00 1296 reject_low 21 ALIGNMENT 0 YS2-17a24.q1k chr12 660 904 947147 947146 F 245 0.00 1296 reject_low 5 ALIGNMENT 256 YS2-17a24.q1k chr07 327 655 811452 811779 F 329 94.83 1296 reject_low 8 ALIGNMENT 0 YS2-17a24.q1k chr06 650 904 143927 143926 F 255 0.00 1296 reject_low 36 ALIGNMENT 254 YS2-17a24.q1k chr09 325 649 246215 246539 F 325 94.77 1296 reject_low 11 ALIGNMENT 0 YS2-17a24.q1k chr04 407 904 1353001 1353000 F 498 0.00 1296 reject_low 32 ALIGNMENT 0 YS2-17a24.q1k chr05 650 904 62464 62463 F 255 0.00 1296 reject_low 15 ALIGNMENT 0 YS2-17a24.q1k chr06 62 329 137658 137657 F 268 0.00 1296 reject_low 36 ALIGNMENT 0 YS2-17a24.q1k chr01 325 62 166165 166164 C 264 0.00 1296 reject_low 23 ALIGNMENT 0 YS2-17a24.q1k chr03 62 369 149523 149522 F 308 0.00 1296 reject_low 26 ALIGNMENT 256 YS2-17a24.q1k chr06 327 655 137908 138235 F 329 94.83 1296 reject_low 7 ALIGNMENT 0 YS2-17a24.q1k chr08 326 62 389513 389512 C 265 0.00 1296 reject_low 13 ALIGNMENT 21 YS2-17a24.q1k chr01 673 715 188536 188578 F 43 83.72 1296 reject_low 22 ALIGNMENT 359 YS2-17a24.q1k chr07 52 467 404732 405148 F 416 98.08 1296 reject_low 1 ALIGNMENT 0 YS2-17a24.q1k chr04 656 904 1352961 1352960 F 249 0.00 1296 reject_low 9 ALIGNMENT 0 YS2-17a24.q1k chr03 326 62 168929 168928 C 265 0.00 1296 reject_low 19 ALIGNMENT 0 YS2-17a24.q1k chr06 663 904 143869 143868 F 242 0.00 1296 reject_low 3 ALIGNMENT 0 YS2-17a24.q1k chr07 389 904 405210 405209 F 516 0.00 1296 reject_low 27 ALIGNMENT 0 YS2-17a24.q1k chr10 62 326 538017 538016 F 265 0.00 1296 reject_low 6 ALIGNMENT 249 YS2-17a24.q1k chr08 649 327 91773 92095 C 323 94.43 1296 reject_low 16 ALIGNMENT 0 YS2-17a24.q1k chr07 62 322 405145 405144 F 261 0.00 1296 reject_low 27 ALIGNMENT 0 YS2-17a24.q1k chr15 326 62 704397 704396 C 265 0.00 1296 reject_low 18 ALIGNMENT 0 YS2-17a24.q1k chr01 904 458 138866 138865 C 447 0.00 1296 reject_low 29 ALIGNMENT 0 YS2-17a24.q1k chr15 904 650 704075 704074 C 255 0.00 1296 reject_low 18 ALIGNMENT 42 YS2-17a24.q1k chr01 457 333 138865 138990 C 125 80.00 1296 reject_low 29 ALIGNMENT 175 YS2-17a24.q1k chr01 636 327 160262 160575 C 310 88.06 1296 reject_low 24 ALIGNMENT 249 YS2-17a24.q1k chr15 649 324 709702 710027 C 326 94.17 1296 reject_low 12 ALIGNMENT 0 YS2-17a24.q1k chr10 656 904 538344 538343 F 249 0.00 1296 reject_low 6 ALIGNMENT 0 YS2-17a24.q1k chr06 656 904 138235 138234 F 249 0.00 1296 reject_low 7 ALIGNMENT 22 YS2-17a24.q1k chr04 367 406 1352962 1353001 F 40 87.50 1296 reject_low 32 ALIGNMENT 0 YS2-17a24.q1k chr12 660 904 941520 941519 F 245 0.00 1296 reject_low 4 ALIGNMENT 85 YS2-17a24.q1k chr03 636 327 124154 124462 C 310 79.35 1296 reject_low 35 ALIGNMENT 0 YS2-17a24.q1k chr03 904 609 142799 142798 C 296 0.00 1296 reject_low 28 ALIGNMENT 0 YS2-17a24.q1k chr04 62 326 1352634 1352633 F 265 0.00 1296 reject_low 9 ALIGNMENT 51 YS2-17a24.q1k chr07 323 388 405145 405210 F 66 95.45 1296 reject_low 27 ALIGNMENT 0 YS2-17a24.q1k chr01 373 62 160203 160202 C 312 0.00 1296 reject_low 31 ALIGNMENT 231 YS2-17a24.q1k chr03 636 327 168618 168928 C 310 93.87 1296 reject_low 19 ALIGNMENT 0 YS2-17a24.q1k chr01 326 62 160576 160575 C 265 0.00 1296 reject_low 24 ALIGNMENT 0 YS2-17a24.q1k chr05 322 62 135944 135943 C 261 0.00 1296 reject_low 2 ALIGNMENT 246 YS2-17a24.q1k chr05 649 327 431496 431818 C 323 94.12 1296 reject_low 17 ALIGNMENT 0 YS2-17a24.q1k chr06 62 326 137908 137907 F 265 0.00 1296 reject_low 7 ALIGNMENT 0 YS2-17a24.q1k chr09 650 904 246539 246538 F 255 0.00 1296 reject_low 11 ALIGNMENT 31 YS2-17a24.q1k chr10 477 360 537832 537948 C 118 77.97 1296 reject_low 30 ALIGNMENT 225 YS2-17a24.q1k chr14 327 636 519164 519474 F 310 93.23 1296 reject_low 20 ALIGNMENT 0 YS2-17a24.q1k chr06 590 591 137903 143868 F 2 0.00 1296 reject_low 36 ALIGNMENT 0 YS2-17a24.q1k chr07 62 326 811452 811451 F 265 0.00 1296 reject_low 8 ALIGNMENT 0 YS2-17a24.q1k chr01 62 325 183135 183134 F 264 0.00 1296 reject_low 34 ALIGNMENT 0 YS2-17a24.q1k chr08 326 62 92096 92095 C 265 0.00 1296 reject_low 16 ALIGNMENT 0 YS2-17a24.q1k chr12 62 326 946816 946815 F 265 0.00 1296 reject_low 5 ALIGNMENT 0 YS2-17a24.q1k chr12 326 62 732003 732002 C 265 0.00 1296 reject_low 14 ALIGNMENT 249 YS2-17a24.q1k chr13 649 323 168359 168685 C 327 94.19 1296 reject_low 10 ALIGNMENT 1062 YS2-17b01.q1k chr12 1240 32 1072881 1074114 C 1209 96.69 1353 ambiguous_tel 1 ALIGNMENT 0 YS2-17b01.q1k chr06 123 184 2974 2989 F 62 0.00 1353 reject_low 21 ALIGNMENT 0 YS2-17b01.q1k chr12 373 359 1067129 1067124 C 15 0.00 1353 reject_low 10 ALIGNMENT 0 YS2-17b01.q1k chr08 843 242 558620 558620 C 602 0.00 1353 reject_low 27 ALIGNMENT 0 YS2-17b01.p1k chr07 62 465 1083590 1083589 F 404 0.00 1399 reject_low 7 ALIGNMENT 53 YS2-17b01.q1k chr08 185 241 3685 3741 F 57 98.25 1353 reject_low 22 ALIGNMENT 0 YS2-17b01.p1k chr06 466 62 5581 5580 C 405 0.00 1399 reject_low 21 ALIGNMENT 0 YS2-17b01.q1k chr08 92 73 558724 558719 C 20 0.00 1353 reject_low 27 ALIGNMENT 1019 YS2-17b01.q1k chr10 32 1240 4520 5754 F 1209 95.53 1353 ambiguous_tel 3 ALIGNMENT 0 YS2-17b01.p1k chr14 62 91 782851 782850 F 30 0.00 1399 reject_low 13 ALIGNMENT 1062 YS2-17b01.q1k chr15 1240 32 1085845 1087078 C 1209 96.69 1353 reject_low 4 ALIGNMENT 468 YS2-17b01.p1k chr05 374 1096 569450 570177 F 723 90.59 1399 reject_low 5 ALIGNMENT 0 YS2-17b01.p1k chr14 466 62 7479 7478 C 405 0.00 1399 reject_low 8 ALIGNMENT 24 YS2-17b01.q1k chr06 93 122 2944 2973 F 30 93.33 1353 reject_low 21 ALIGNMENT 0 YS2-17b01.p1k chr05 87 373 569018 569449 F 287 0.00 1399 reject_low 5 ALIGNMENT 645 YS2-17b01.p1k chr11 1057 92 265 1233 C 966 91.10 1399 reject_low 12 ALIGNMENT 408 YS2-17b01.p1k chr15 323 1096 1083721 1084486 F 774 87.08 1399 reject_low 4 ALIGNMENT 0 YS2-17b01.q1k chr08 73 92 3643 3638 F 20 0.00 1353 reject_low 22 ALIGNMENT 0 YS2-17b01.q1k chr12 123 184 3937 3952 F 62 0.00 1353 reject_low 19,24 ALIGNMENT 376 YS2-17b01.p1k chr10 466 1096 744767 745398 F 631 89.06 1399 reject_low 20 ALIGNMENT 0 YS2-17b01.q1k chr02 242 843 4211 4211 F 602 0.00 1353 reject_low 17 ALIGNMENT 145 YS2-17b01.p1k chr11 148 380 665317 665548 F 233 88.84 1399 reject_low 11 ALIGNMENT 24 YS2-17b01.q1k chr13 93 122 3783 3812 F 30 93.33 1353 reject_low 25 ALIGNMENT 0 YS2-17b01.p1k chr12 91 62 12513 12512 C 30 0.00 1399 reject_low 19 ALIGNMENT 0 YS2-17b01.p1k chr01 91 62 1230 1229 C 30 0.00 1399 reject_low 14 ALIGNMENT 53 YS2-17b01.q1k chr16 241 185 944168 944224 C 57 98.25 1353 reject_low 26 ALIGNMENT 627 YS2-17b01.p1k chr04 92 1043 1524179 1525141 F 952 90.65 1399 ambiguous_tel 0 ALIGNMENT 0 YS2-17b01.q1k chr08 184 123 558678 558693 C 62 0.00 1353 reject_low 27 ALIGNMENT 53 YS2-17b01.q1k chr06 185 241 2990 3046 F 57 98.25 1353 reject_low 21 ALIGNMENT 336 YS2-17b01.p1k chr06 1057 467 4986 5580 C 591 88.32 1399 reject_low 21 ALIGNMENT 24 YS2-17b01.q1k chr12 93 122 9442 9471 F 30 93.33 1353 reject_low 23 ALIGNMENT 0 YS2-17b01.q1k chr12 242 843 4010 9545 F 602 0.00 1353 reject_low 24 ALIGNMENT 464 YS2-17b01.p1k chr15 1096 327 266 1039 C 770 89.09 1399 reject_low 16 ALIGNMENT 579 YS2-17b01.p1k chr10 1055 92 7225 8195 C 964 88.80 1399 ambiguous_tel 3 ALIGNMENT 29 YS2-17b01.q1k chr05 374 408 4555 4589 F 35 94.29 1353 reject_low 9 ALIGNMENT 0 YS2-17b01.q1k chr16 92 73 944271 944266 C 20 0.00 1353 reject_low 26 ALIGNMENT 377 YS2-17b01.p1k chr14 1043 467 6896 7478 C 577 90.99 1399 reject_low 8 ALIGNMENT 1005 YS2-17b01.q1k chr05 1240 32 571509 572742 C 1209 95.12 1353 reject_low 5 ALIGNMENT 29 YS2-17b01.q1k chr08 40 72 3610 3642 F 33 96.97 1353 reject_low 22 ALIGNMENT 245 YS2-17b01.q1k chr13 844 1240 3887 4308 F 397 89.17 1353 reject_low 25 ALIGNMENT 1002 YS2-17b01.q1k chr07 1240 32 1085586 1086819 C 1209 95.04 1353 reject_low 7 ALIGNMENT 0 YS2-17b01.p1k chr02 91 62 7036 7035 C 30 0.00 1399 reject_low 17 ALIGNMENT 399 YS2-17b01.p1k chr11 518 1167 665543 666194 F 650 90.00 1399 reject_low 11 ALIGNMENT 1002 YS2-17b01.q1k chr16 32 1240 4058 5291 F 1209 95.04 1353 reject_low 6 ALIGNMENT 0 YS2-17b01.q1k chr02 73 92 4112 4107 F 20 0.00 1353 reject_low 17 ALIGNMENT 0 YS2-17b01.q1k chr12 73 92 3911 3906 F 20 0.00 1353 reject_low 19,24,28 ALIGNMENT 1019 YS2-17b01.q1k chr09 32 1240 4537 5771 F 1209 95.53 1353 ambiguous_tel 2 ALIGNMENT 329 YS2-17b01.p1k chr08 1004 467 5023 5554 C 538 90.33 1399 reject_low 22 ALIGNMENT 0 YS2-17b01.q1k chr06 242 845 3047 3049 F 604 0.00 1353 reject_low 21 ALIGNMENT 0 YS2-17b01.p1k chr10 91 62 8196 8195 C 30 0.00 1399 ambiguous_tel 3 ALIGNMENT 311 YS2-17b01.q1k chr12 358 32 1067125 1067451 C 327 98.47 1353 reject_low 10 ALIGNMENT 505 YS2-17b01.q1k chr12 1240 465 1066329 1067097 C 776 90.85 1353 reject_low 10 ALIGNMENT 579 YS2-17b01.p1k chr09 1055 92 7242 8212 C 964 88.80 1399 ambiguous_tel 2 ALIGNMENT 0 YS2-17b01.p1k chr03 437 62 1179 1178 C 376 0.00 1399 reject_low 18 ALIGNMENT 0 YS2-17b01.p1k chr11 381 517 665549 665542 F 137 0.00 1399 reject_low 11 ALIGNMENT 0 YS2-17b01.p1k chr04 62 91 1524179 1524178 F 30 0.00 1399 ambiguous_tel 0 ALIGNMENT 24 YS2-17b01.q1k chr16 122 93 944241 944270 C 30 93.33 1353 reject_low 26 ALIGNMENT 0 YS2-17b01.q1k chr13 73 92 3787 3782 F 20 0.00 1353 reject_low 25 ALIGNMENT 53 YS2-17b01.q1k chr12 185 241 3953 4009 F 57 98.25 1353 reject_low 19,24 ALIGNMENT 0 YS2-17b01.q1k chr05 359 373 4559 4554 F 15 0.00 1353 reject_low 9 ALIGNMENT 24 YS2-17b01.q1k chr08 93 122 3639 3668 F 30 93.33 1353 reject_low 22 ALIGNMENT 0 YS2-17b01.p1k chr03 62 326 315587 315586 F 265 0.00 1399 reject_low 15 ALIGNMENT 997 YS2-17b01.q1k chr14 32 1197 4149 5331 F 1166 95.71 1353 reject_low 8 ALIGNMENT 41 YS2-17b01.p1k chr05 36 86 568967 569017 F 51 96.08 1399 reject_low 5 ALIGNMENT 0 YS2-17b01.p1k chr12 62 91 1063849 1063848 F 30 0.00 1399 ambiguous_tel 1 ALIGNMENT 614 YS2-17b01.p1k chr02 1057 92 6057 7035 C 966 89.86 1399 reject_low 17 ALIGNMENT 314 YS2-17b01.q1k chr05 32 358 4232 4558 F 327 98.78 1353 reject_low 9 ALIGNMENT 0 YS2-17b01.p1k chr09 91 62 8213 8212 C 30 0.00 1399 ambiguous_tel 2 ALIGNMENT 0 YS2-17b01.q1k chr12 464 409 1067098 1067093 C 56 0.00 1353 reject_low 10 ALIGNMENT 0 YS2-17b01.q1k chr02 123 184 4138 4153 F 62 0.00 1353 reject_low 17 ALIGNMENT 505 YS2-17b01.q1k chr05 465 1240 4586 5354 F 776 90.85 1353 reject_low 9 ALIGNMENT 426 YS2-17b01.p1k chr03 1043 438 573 1178 C 606 92.57 1399 reject_low 18 ALIGNMENT 245 YS2-17b01.q1k chr12 844 1240 4011 4432 F 397 89.17 1353 reject_low 19 ALIGNMENT 0 YS2-17b01.p1k chr15 326 62 1040 1039 C 265 0.00 1399 reject_low 16 ALIGNMENT 583 YS2-17b01.p1k chr14 92 1057 782851 783821 F 966 88.82 1399 reject_low 13 ALIGNMENT 53 YS2-17b01.q1k chr08 241 185 558621 558677 C 57 98.25 1353 reject_low 27 ALIGNMENT 24 YS2-17b01.q1k chr02 93 122 4108 4137 F 30 93.33 1353 reject_low 17 ALIGNMENT 411 YS2-17b01.p1k chr16 1100 323 6650 7420 C 778 87.15 1399 reject_low 6 ALIGNMENT 242 YS2-17b01.q1k chr08 1240 844 558198 558619 C 397 88.92 1353 reject_low 27 ALIGNMENT 471 YS2-17b01.p1k chr03 327 1096 315587 316357 F 770 89.35 1399 reject_low 15 ALIGNMENT 0 YS2-17b01.q1k chr16 184 123 944225 944240 C 62 0.00 1353 reject_low 26 ALIGNMENT 24 YS2-17b01.q1k chr08 122 93 558694 558723 C 30 93.33 1353 reject_low 27 ALIGNMENT 29 YS2-17b01.q1k chr08 72 40 558720 558752 C 33 96.97 1353 reject_low 27 ALIGNMENT 534 YS2-17b01.p1k chr01 1057 92 255 1229 C 966 87.16 1399 reject_low 14 ALIGNMENT 46 YS2-17b01.p1k chr11 36 88 665254 665306 F 53 98.11 1399 reject_low 11 ALIGNMENT 29 YS2-17b01.q1k chr02 40 72 4079 4111 F 33 96.97 1353 reject_low 17 ALIGNMENT 579 YS2-17b01.p1k chr12 1043 92 11559 12512 C 952 88.87 1399 reject_low 19 ALIGNMENT 0 YS2-17b01.p1k chr15 62 322 1083721 1083720 F 261 0.00 1399 reject_low 4 ALIGNMENT 29 YS2-17b01.q1k chr12 40 72 3878 3910 F 33 96.97 1353 reject_low 19,24,28 ALIGNMENT 29 YS2-17b01.q1k chr12 408 374 1067094 1067128 C 35 94.29 1353 reject_low 10 ALIGNMENT 243 YS2-17b01.q1k chr06 846 1240 3050 3470 F 395 89.11 1353 reject_low 21 ALIGNMENT 53 YS2-17b01.q1k chr02 185 241 4154 4210 F 57 98.25 1353 reject_low 17 ALIGNMENT 0 YS2-17b01.q1k chr12 123 914 9471 9470 F 792 0.00 1353 reject_low 23 ALIGNMENT 0 YS2-17b01.q1k chr05 409 464 4590 4585 F 56 0.00 1353 reject_low 9 ALIGNMENT 0 YS2-17b01.q1k chr12 242 914 9544 9543 F 673 0.00 1353 reject_low 28 ALIGNMENT 53 YS2-17b01.q1k chr12 185 241 9488 9544 F 57 98.25 1353 reject_low 28 ALIGNMENT 0 YS2-17b01.q1k chr12 123 184 3937 9487 F 62 0.00 1353 reject_low 28 ALIGNMENT 53 YS2-17b01.q1k chr13 185 241 3829 3885 F 57 98.25 1353 reject_low 25 ALIGNMENT 29 YS2-17b01.q1k chr06 40 72 2915 2947 F 33 96.97 1353 reject_low 21 ALIGNMENT 0 YS2-17b01.q1k chr12 73 92 9446 9441 F 20 0.00 1353 reject_low 23 ALIGNMENT 245 YS2-17b01.q1k chr12 844 1240 9546 9967 F 397 89.17 1353 reject_low 24 ALIGNMENT 392 YS2-17b01.p1k chr07 466 1057 1083590 1084181 F 592 91.39 1399 reject_low 7 ALIGNMENT 0 YS2-17b01.q1k chr12 242 843 4010 4010 F 602 0.00 1353 reject_low 19 ALIGNMENT 0 YS2-17b01.p1k chr11 91 62 1234 1233 C 30 0.00 1399 reject_low 12 ALIGNMENT 1062 YS2-17b01.q1k chr04 1240 32 1526680 1527913 C 1209 96.69 1353 ambiguous_tel 0 ALIGNMENT 29 YS2-17b01.q1k chr16 72 40 944267 944299 C 33 96.97 1353 reject_low 26 ALIGNMENT 0 YS2-17b01.q1k chr08 242 843 3742 3742 F 602 0.00 1353 reject_low 22 ALIGNMENT 24 YS2-17b01.q1k chr12 93 122 3907 3936 F 30 93.33 1353 reject_low 19,24,28 ALIGNMENT 29 YS2-17b01.q1k chr12 40 72 9413 9445 F 33 96.97 1353 reject_low 23 ALIGNMENT 0 YS2-17b01.q1k chr16 843 242 944167 944167 C 602 0.00 1353 reject_low 26 ALIGNMENT 0 YS2-17b01.q1k chr13 123 184 3813 3828 F 62 0.00 1353 reject_low 25 ALIGNMENT 0 YS2-17b01.p1k chr11 89 147 665307 665316 F 59 0.00 1399 reject_low 11 ALIGNMENT 0 YS2-17b01.p1k chr16 322 62 7421 7420 C 261 0.00 1399 reject_low 6 ALIGNMENT 245 YS2-17b01.q1k chr08 844 1240 3743 4164 F 397 89.17 1353 reject_low 22 ALIGNMENT 29 YS2-17b01.q1k chr13 40 72 3754 3786 F 33 96.97 1353 reject_low 25 ALIGNMENT 0 YS2-17b01.q1k chr06 73 92 2948 2943 F 20 0.00 1353 reject_low 21 ALIGNMENT 245 YS2-17b01.q1k chr16 1240 844 943744 944166 C 397 89.17 1353 reject_low 26 ALIGNMENT 0 YS2-17b01.p1k chr08 466 62 5555 5554 C 405 0.00 1399 reject_low 22 ALIGNMENT 0 YS2-17b01.p1k chr10 62 465 744767 744766 F 404 0.00 1399 reject_low 20 ALIGNMENT 536 YS2-17b01.p1k chr12 92 1096 1063849 1064867 F 1005 86.47 1399 ambiguous_tel 1 ALIGNMENT 242 YS2-17b01.q1k chr02 844 1240 4212 4633 F 397 88.92 1353 reject_low 17 ALIGNMENT 0 YS2-17b01.q1k chr08 123 184 3669 3684 F 62 0.00 1353 reject_low 22 ALIGNMENT 0 YS2-17b01.q1k chr13 242 843 3886 3886 F 602 0.00 1353 reject_low 25 ALIGNMENT 1005 YS2-17b03.q1k chr04 42 1247 1404374 1405591 F 1206 96.43 1388 accept 0 ALIGNMENT 1023 YS2-17b03.p1k chr04 1230 36 1408075 1409285 C 1195 96.40 1420 accept 0 ALIGNMENT 181 YS2-17b05.q1k chr15 559 46 298898 299413 C 514 79.18 1433 accept 0 ALIGNMENT 177 YS2-17b06.q1k chr08 1001 317 6831 7530 C 685 77.23 1274 reject_low 11 ALIGNMENT 0 YS2-17b06.p1k chr08 62 223 3743 3742 F 162 0.00 1348 reject_low 11 ALIGNMENT 912 YS2-17b06.p1k chr16 31 1080 4677 5743 F 1050 96.38 1348 reject_low 5 ALIGNMENT 912 YS2-17b06.p1k chr14 31 1080 4768 5834 F 1050 96.38 1348 accept_tel 0 ALIGNMENT 722 YS2-17b06.p1k chr12 224 1080 9546 10419 F 857 95.80 1348 reject_low 18 ALIGNMENT 0 YS2-17b06.p1k chr16 223 62 944167 944166 C 162 0.00 1348 reject_low 15 ALIGNMENT 900 YS2-17b06.p1k chr12 1084 31 1072424 1073495 C 1054 96.02 1348 reject_low 9 ALIGNMENT 717 YS2-17b06.p1k chr08 1084 224 557742 558619 C 861 95.70 1348 reject_low 19 ALIGNMENT 0 YS2-17b06.p1k chr12 62 223 4011 4010 F 162 0.00 1348 reject_low 17 ALIGNMENT 827 YS2-17b06.q1k chr06 1023 31 6830 7835 C 993 95.47 1274 reject_low 1 ALIGNMENT 724 YS2-17b06.p1k chr16 1084 224 943287 944166 C 861 95.82 1348 reject_low 15 ALIGNMENT 0 YS2-17b06.q1k chr10 62 307 742775 742774 F 246 0.00 1274 reject_low 20 ALIGNMENT 0 YS2-17b06.p1k chr02 62 223 4212 4211 F 162 0.00 1348 reject_low 16 ALIGNMENT 769 YS2-17b06.p1k chr12 1084 31 1065872 1066911 C 1054 92.98 1348 reject_low 13 ALIGNMENT 0 YS2-17b06.q1k chr04 307 62 2942 2941 C 246 0.00 1274 reject_low 22 ALIGNMENT 0 YS2-17b06.q1k chr13 219 62 8466 8465 C 158 0.00 1274 reject_low 3 ALIGNMENT 912 YS2-17b06.p1k chr07 1084 31 1085129 1086200 C 1054 96.39 1348 reject_low 2 ALIGNMENT 808 YS2-17b06.q1k chr02 31 1001 810065 811042 F 971 95.37 1274 reject_low 4 ALIGNMENT 906 YS2-17b06.p1k chr10 31 1080 5140 6206 F 1050 96.19 1348 reject_low 7 ALIGNMENT 339 YS2-17b06.q1k chr10 308 1019 742775 743505 F 712 83.99 1274 reject_low 20 ALIGNMENT 699 YS2-17b06.p1k chr05 31 1080 4772 5789 F 1050 91.43 1348 reject_low 14 ALIGNMENT 275 YS2-17b06.q1k chr09 331 1019 437060 437767 F 689 82.15 1274 reject_low 21 ALIGNMENT 722 YS2-17b06.p1k chr12 224 1080 4011 4884 F 857 95.80 1348 reject_low 17 ALIGNMENT 270 YS2-17b06.q1k chr04 943 308 2298 2941 C 636 82.23 1274 reject_low 22 ALIGNMENT 900 YS2-17b06.p1k chr04 1084 31 1526223 1527294 C 1054 96.02 1348 reject_low 8 ALIGNMENT 0 YS2-17b06.q1k chr09 62 330 437060 437059 F 269 0.00 1274 reject_low 21 ALIGNMENT 0 YS2-17b06.q1k chr11 886 591 15421 15420 C 296 0.00 1274 reject_low 23 ALIGNMENT 762 YS2-17b06.q1k chr14 1023 31 8734 9745 C 993 93.45 1274 accept_tel 0 ALIGNMENT 639 YS2-17b06.q1k chr13 1001 220 7675 8465 C 782 94.88 1274 reject_low 3 ALIGNMENT 817 YS2-17b06.p1k chr05 1084 31 571069 572123 C 1054 94.02 1348 reject_low 12 ALIGNMENT 0 YS2-17b06.p1k chr08 223 62 558620 558619 C 162 0.00 1348 reject_low 19 ALIGNMENT 722 YS2-17b06.p1k chr02 224 1080 4212 5085 F 857 95.80 1348 reject_low 16 ALIGNMENT 0 YS2-17b06.p1k chr06 62 225 3050 3049 F 164 0.00 1348 reject_low 1 ALIGNMENT 0 YS2-17b06.p1k chr12 62 223 9546 9545 F 162 0.00 1348 reject_low 18 ALIGNMENT 0 YS2-17b06.p1k chr13 62 223 3887 3886 F 162 0.00 1348 reject_low 3 ALIGNMENT 0 YS2-17b06.q1k chr11 329 62 15681 15680 C 268 0.00 1274 reject_low 23 ALIGNMENT 720 YS2-17b06.p1k chr06 226 1080 3050 3922 F 855 95.67 1348 reject_low 1 ALIGNMENT 578 YS2-17b06.q1k chr07 31 1001 1081320 1082304 F 971 88.16 1274 reject_low 2 ALIGNMENT 900 YS2-17b06.p1k chr15 1084 31 1085388 1086459 C 1054 96.02 1348 reject_low 10 ALIGNMENT 170 YS2-17b06.q1k chr11 590 330 15420 15680 C 261 89.27 1274 reject_low 23 ALIGNMENT 0 YS2-17b06.q1k chr08 316 62 7531 7530 C 255 0.00 1274 reject_low 11 ALIGNMENT 722 YS2-17b06.p1k chr08 224 1080 3743 4616 F 857 95.80 1348 reject_low 11 ALIGNMENT 906 YS2-17b06.p1k chr09 31 1080 5157 6223 F 1050 96.19 1348 reject_low 6 ALIGNMENT 722 YS2-17b06.p1k chr13 224 1080 3887 4760 F 857 95.80 1348 reject_low 3 ALIGNMENT 171 YS2-17b07.q1k chr02 38 217 335383 335563 F 180 99.44 257 accept_chi 1 ALIGNMENT 173 YS2-17b07.p1k chr02 212 32 335383 335563 C 181 99.45 218 accept_chi 0 ALIGNMENT 0 YS2-17b07.q1k vc_5 218 62 5064 5063 C 157 0.00 257 reject_low 5 ALIGNMENT 39 YS2-17b07.q1k vc_5 257 219 5025 5063 C 39 100.00 257 reject_low 5 ALIGNMENT 43 YS2-17b07.q1k vc_4 212 257 5826 5871 F 46 97.83 257 reject_low 4 ALIGNMENT 0 YS2-17b07.q1k vc_4 62 211 5826 5825 F 150 0.00 257 reject_low 4 ALIGNMENT 36 YS2-17b07.q1k vc_5 254 219 1 36 C 36 100.00 257 reject_low 7 ALIGNMENT 0 YS2-17b07.q1k vc_7 62 219 13525 13524 F 158 0.00 257 reject_low 6 ALIGNMENT 38 YS2-17b07.q1k vc_7 220 257 13525 13562 F 38 100.00 257 reject_low 6 ALIGNMENT 0 YS2-17b07.q1k vc_5 218 62 37 36 C 157 0.00 257 reject_low 7 ALIGNMENT 0 YS2-17b07.q1k vc_1 211 62 2518 2517 C 150 0.00 257 reject_low 2 ALIGNMENT 0 YS2-17b07.q1k vc_3 211 62 2518 2517 C 150 0.00 257 reject_low 3 ALIGNMENT 43 YS2-17b07.q1k vc_1 257 212 2472 2517 C 46 97.83 257 reject_low 2 ALIGNMENT 0 YS2-17b07.q1k chr02 218 257 335563 335562 F 40 0.00 257 accept_chi 1 ALIGNMENT 43 YS2-17b07.q1k vc_3 257 212 2472 2517 C 46 97.83 257 reject_low 3 ALIGNMENT 0 YS2-17b09.q1k chr12 62 932 510838 510837 F 871 0.00 1386 reject_low 3 ALIGNMENT 0 YS2-17b09.q1k chr07 256 62 379192 379191 C 195 0.00 1386 reject_low 12 ALIGNMENT 0 YS2-17b09.q1k chr11 254 62 566769 566768 C 193 0.00 1386 reject_low 13 ALIGNMENT 0 YS2-17b09.q1k chr10 873 288 403979 403978 C 586 0.00 1386 reject_low 6 ALIGNMENT 0 YS2-17b09.p1k chr12 920 782 510835 510834 C 139 0.00 1407 reject_low 2 ALIGNMENT 0 YS2-17b09.q1k chr11 62 250 613335 613334 F 189 0.00 1386 reject_low 7 ALIGNMENT 0 YS2-17b09.p1k chr12 550 920 510644 510643 F 371 0.00 1407 reject_low 1 ALIGNMENT 28 YS2-17b09.q1k chr12 933 971 510838 510875 F 39 92.31 1386 reject_low 3 ALIGNMENT 0 YS2-17b09.q1k chr07 62 249 53130 53129 F 188 0.00 1386 reject_low 9 ALIGNMENT 26 YS2-17b09.q1k chr11 251 282 613335 613366 F 32 100.00 1386 reject_low 7 ALIGNMENT 0 YS2-17b09.p1k chr12 325 62 510447 510446 C 264 0.00 1407 reject_low 4 ALIGNMENT 20 YS2-17b09.q1k chr10 287 259 403978 404006 C 29 96.55 1386 reject_low 6 ALIGNMENT 21 YS2-17b09.q1k chr11 280 255 566743 566768 C 26 100.00 1386 reject_low 13 ALIGNMENT 0 YS2-17b09.q1k chr11 873 281 566744 566743 C 593 0.00 1386 reject_low 13 ALIGNMENT 20 YS2-17b09.q1k chr13 274 250 514628 514652 C 25 100.00 1386 reject_low 11 ALIGNMENT 0 YS2-17b09.q1k chr13 873 275 514629 514628 C 599 0.00 1386 reject_low 11 ALIGNMENT 0 YS2-17b09.q1k chr02 873 285 780433 780432 C 589 0.00 1386 reject_low 8 ALIGNMENT 25 YS2-17b09.q1k chr14 277 246 70027 70058 C 32 100.00 1386 reject_low 5 ALIGNMENT 0 YS2-17b09.q1k chr11 283 873 613366 613365 F 591 0.00 1386 reject_low 7 ALIGNMENT 0 YS2-17b09.p1k chr12 62 125 510222 510221 F 64 0.00 1407 reject_low 1 ALIGNMENT 21 YS2-17b09.q1k chr07 282 257 379166 379191 C 26 100.00 1386 reject_low 12 ALIGNMENT 0 YS2-17b09.q1k chr09 254 62 49532 49531 C 193 0.00 1386 reject_low 10 ALIGNMENT 0 YS2-17b09.p1k chr12 738 62 510876 510875 C 677 0.00 1407 reject_low 2 ALIGNMENT 0 YS2-17b09.q1k chr02 249 62 780467 780466 C 188 0.00 1386 reject_low 8 ALIGNMENT 0 YS2-17b09.q1k chr13 62 252 539498 539497 F 191 0.00 1386 reject_low 14 ALIGNMENT 966 YS2-17b09.q1k chr12 1154 33 510650 511776 C 1122 95.81 1386 accept 0 ALIGNMENT 0 YS2-17b09.q1k chr10 258 62 404007 404006 C 197 0.00 1386 reject_low 6 ALIGNMENT 0 YS2-17b09.q1k chr07 285 873 53164 53163 F 589 0.00 1386 reject_low 9 ALIGNMENT 26 YS2-17b09.p1k chr12 351 326 510421 510446 C 26 100.00 1407 reject_low 4 ALIGNMENT 21 YS2-17b09.q1k chr09 284 255 49502 49531 C 30 96.67 1386 reject_low 10 ALIGNMENT 0 YS2-17b09.q1k chr07 873 283 379167 379166 C 591 0.00 1386 reject_low 12 ALIGNMENT 20 YS2-17b09.q1k chr13 253 277 539498 539522 F 25 100.00 1386 reject_low 14 ALIGNMENT 389 YS2-17b09.p1k chr12 126 549 510222 510644 F 424 97.64 1407 reject_low 1 ALIGNMENT 0 YS2-17b09.q1k chr14 873 278 70028 70027 C 596 0.00 1386 reject_low 5 ALIGNMENT 0 YS2-17b09.q1k chr13 278 873 539522 539521 F 596 0.00 1386 reject_low 14 ALIGNMENT 0 YS2-17b09.q1k chr13 249 62 514653 514652 C 188 0.00 1386 reject_low 11 ALIGNMENT 0 YS2-17b09.p1k chr12 920 352 510422 510421 C 569 0.00 1407 reject_low 4 ALIGNMENT 0 YS2-17b09.q1k chr14 245 62 70059 70058 C 184 0.00 1386 reject_low 5 ALIGNMENT 1027 YS2-17b09.p1k chr12 29 1189 510124 511298 F 1161 96.81 1407 accept 0 ALIGNMENT 22 YS2-17b09.q1k chr02 284 250 780432 780466 C 35 94.29 1386 reject_low 8 ALIGNMENT 0 YS2-17b09.q1k chr09 873 285 49503 49502 C 589 0.00 1386 reject_low 10 ALIGNMENT 22 YS2-17b09.q1k chr07 250 284 53130 53164 F 35 94.29 1386 reject_low 9 ALIGNMENT 38 YS2-17b09.p1k chr12 781 739 510834 510875 C 43 97.67 1407 reject_low 2 ALIGNMENT 40 YS2-17b11.q1k vc_5 253 211 5025 5067 C 43 97.67 253 reject_low 6 ALIGNMENT 0 YS2-17b11.q1k chr09 253 213 67521 67520 C 41 0.00 253 accept_chi 1 ALIGNMENT 37 YS2-17b11.q1k vc_5 250 211 1 40 C 40 97.50 253 reject_low 8 ALIGNMENT 0 YS2-17b11.q1k vc_3 212 62 2513 2512 C 151 0.00 253 reject_low 4 ALIGNMENT 164 YS2-17b11.p1k chr09 31 205 67520 67694 F 175 100.00 211 accept_chi 0 ALIGNMENT 41 YS2-17b11.q1k vc_3 253 213 2472 2512 C 41 100.00 253 reject_low 4 ALIGNMENT 0 YS2-17b11.q1k vc_7 62 215 13525 13524 F 154 0.00 253 reject_low 7 ALIGNMENT 0 YS2-17b11.q1k vc_4 62 212 5831 5830 F 151 0.00 253 reject_low 5 ALIGNMENT 0 YS2-17b11.q1k vc_1 212 62 2513 2512 C 151 0.00 253 reject_low 2 ALIGNMENT 41 YS2-17b11.q1k vc_2 253 213 2105 2145 C 41 100.00 253 reject_low 3 ALIGNMENT 0 YS2-17b11.q1k vc_2 212 62 2146 2145 C 151 0.00 253 reject_low 3 ALIGNMENT 0 YS2-17b11.q1k vc_5 210 62 41 40 C 149 0.00 253 reject_low 8 ALIGNMENT 41 YS2-17b11.q1k vc_4 213 253 5831 5871 F 41 100.00 253 reject_low 5 ALIGNMENT 0 YS2-17b11.q1k vc_5 210 62 5068 5067 C 149 0.00 253 reject_low 6 ALIGNMENT 41 YS2-17b11.q1k vc_1 253 213 2472 2512 C 41 100.00 253 reject_low 2 ALIGNMENT 38 YS2-17b11.q1k vc_7 216 253 13525 13562 F 38 100.00 253 reject_low 7 ALIGNMENT 164 YS2-17b11.q1k chr09 212 38 67520 67694 C 175 100.00 253 accept_chi 1 ALIGNMENT 1043 YS2-17b14.p1k chr13 29 1204 249254 250440 F 1176 96.34 1425 accept 0 ALIGNMENT 1063 YS2-17b14.q1k chr13 1308 31 252942 254224 C 1278 94.60 1458 accept 0 ALIGNMENT 0 YS2-17b15.p1k scplasm1 62 604 3897 3896 F 543 0.00 1420 reject_low 5 ALIGNMENT 0 YS2-17b15.p1k vc_6 410 885 6535 6534 F 476 0.00 1420 reject_low 3 ALIGNMENT 0 YS2-17b15.p1k scplasm1 823 885 936 935 F 63 0.00 1420 accept 0 ALIGNMENT 0 YS2-17b15.p1k scplasm1 225 62 4313 4312 C 164 0.00 1420 reject_low 2 ALIGNMENT 22 YS2-17b15.p1k scplasm1 605 641 3897 3933 F 37 86.49 1420 reject_low 5 ALIGNMENT 865 YS2-17b15.q1k scplasm1 1011 2 5303 6318 C 1010 95.84 1204 accept 0 ALIGNMENT 706 YS2-17b15.q1k vc_6 750 1 5263 6012 C 750 98.93 1204 reject_low 1 ALIGNMENT 738 YS2-17b15.p1k scplasm1 32 822 147 936 F 791 98.23 1420 accept 0 ALIGNMENT 0 YS2-17b15.p1k scplasm1 885 642 721 720 C 244 0.00 1420 reject_low 4 ALIGNMENT 0 YS2-17b15.p1k scplasm1 642 885 3933 3932 F 244 0.00 1420 reject_low 5 ALIGNMENT 22 YS2-17b15.p1k scplasm1 641 605 720 756 C 37 86.49 1420 reject_low 4 ALIGNMENT 0 YS2-17b15.p1k scplasm1 604 62 757 756 C 543 0.00 1420 reject_low 4 ALIGNMENT 373 YS2-17b15.p1k vc_6 32 409 6158 6535 F 378 100.00 1420 reject_low 3 ALIGNMENT 555 YS2-17b15.p1k scplasm1 1140 226 3387 4312 C 915 88.09 1420 reject_low 2 ALIGNMENT 320 YS2-17b18.q1k chr15 61 693 681444 682076 F 633 83.89 1370 reject_low 1 ALIGNMENT 980 YS2-17b18.p1k chr12 1140 25 723866 724992 C 1116 97.31 1321 accept 0 ALIGNMENT 0 YS2-17b18.q1k chr15 694 857 682076 682075 F 164 0.00 1370 reject_low 1 ALIGNMENT 973 YS2-17b18.q1k chr12 39 1152 720751 721881 F 1114 96.86 1370 accept 0 ALIGNMENT 1068 YS2-17b19.q1k chr13 1234 39 341772 342979 C 1196 97.41 1382 accept 0 ALIGNMENT 977 YS2-17b19.p1k chr13 59 1215 337969 339141 F 1157 96.11 1390 accept 0 ALIGNMENT 640 YS2-17b20.p1k chr07 1147 343 1566 2389 C 805 95.40 1337|0,3 accept_chi 0 ALIGNMENT 0 YS2-17b20.p1k chr07 345 346 2387 2516 C 0 0.00 1337 accept_chi 0 ALIGNMENT 248 YS2-17b20.p1k chr07 348 31 2514 2826 C 318 95.60 1337|3,0 accept_chi 0 ALIGNMENT 761 YS2-17b20.q1k chr09 1132 37 37571 38670 C 1096 90.42 1361 accept_chi 1 ALIGNMENT 973 YS2-17b21.q1k chr09 30 1307 294945 296210 F 1278 94.21 1343 accept 0 ALIGNMENT 891 YS2-17b21.p1k chr09 1279 138 297343 298475 C 1142 94.57 1312 accept 0 ALIGNMENT 1011 YS2-17b22.q1k chr14 41 1292 401432 402695 F 1252 95.13 1331 accept 0 ALIGNMENT 1029 YS2-17b22.p1k chr14 1273 63 401910 403133 C 1211 96.28 1327 accept 0 ALIGNMENT 1012 YS2-17b23.p1k chr10 31 1266 187802 189047 F 1236 94.98 1268 accept 0 ALIGNMENT 1075 YS2-17b23.q1k chr10 1275 41 189275 190523 C 1235 96.60 1277 accept 0 ALIGNMENT 896 YS2-17b24.p1k chr09 1283 183 84854 85958 C 1101 94.91 1313 accept 0 ALIGNMENT 1026 YS2-17b24.q1k chr09 38 1233 81821 83015 F 1196 95.82 1284 accept 0 ALIGNMENT 0 YS2-17c02.q1k chr14 217 256 7800 7799 F 40 0.00 256 ambiguous_tel 4 ALIGNMENT 179 YS2-17c02.q1k chr13 38 216 6535 6713 F 179 100.00 256 ambiguous_tel 2 ALIGNMENT 0 YS2-17c02.q1k chr06 208 256 5894 5893 F 49 0.00 256 reject_low 7 ALIGNMENT 0 YS2-17c02.q1k vc_5 217 62 5064 5063 C 156 0.00 256 reject_low 13 ALIGNMENT 0 YS2-17c02.q1k vc_7 62 218 13525 13524 F 157 0.00 256 reject_low 14 ALIGNMENT 137 YS2-17c02.q1k chr07 203 39 1083281 1083445 C 165 94.55 256 reject_low 6 ALIGNMENT 40 YS2-17c02.q1k vc_4 217 256 5832 5871 F 40 100.00 256 reject_low 12 ALIGNMENT 36 YS2-17c02.q1k vc_5 253 218 1 36 C 36 100.00 256 reject_low 15 ALIGNMENT 120 YS2-17c02.q1k chr06 39 207 5726 5894 F 169 90.53 256 reject_low 7 ALIGNMENT 136 YS2-17c02.q1k chr09 208 39 438699 438869 C 170 93.53 256 ambiguous_tel 5 ALIGNMENT 40 YS2-17c02.q1k vc_3 256 217 2472 2511 C 40 100.00 256 reject_low 11 ALIGNMENT 38 YS2-17c02.q1k vc_7 219 256 13525 13562 F 38 100.00 256 reject_low 14 ALIGNMENT 0 YS2-17c02.q1k chr04 217 256 1276 1275 F 40 0.00 256 ambiguous_tel 1 ALIGNMENT 0 YS2-17c02.q1k chr13 217 256 6713 6712 F 40 0.00 256 ambiguous_tel 2 ALIGNMENT 0 YS2-17c02.q1k vc_5 217 62 37 36 C 156 0.00 256 reject_low 15 ALIGNMENT 176 YS2-17c02.q1k chr10 216 38 744445 744623 C 179 99.44 256 ambiguous_tel 3 ALIGNMENT 105 YS2-17c02.q1k chr05 39 161 6669 6791 F 123 95.12 256 reject_low 9 ALIGNMENT 0 YS2-17c02.q1k chr05 162 256 6791 6790 F 95 0.00 256 reject_low 9 ALIGNMENT 0 YS2-17c02.q1k chr07 256 204 1083282 1083281 C 53 0.00 256 reject_low 6 ALIGNMENT 0 YS2-17c02.q1k vc_1 216 62 2512 2511 C 155 0.00 256 reject_low 10 ALIGNMENT 0 YS2-17c02.q1k vc_3 216 62 2512 2511 C 155 0.00 256 reject_low 11 ALIGNMENT 0 YS2-17c02.q1k chr09 256 209 438700 438699 C 48 0.00 256 ambiguous_tel 5 ALIGNMENT 0 YS2-17c02.q1k chr02 256 217 812005 812004 C 40 0.00 256 ambiguous_tel 0 ALIGNMENT 179 YS2-17c02.q1k chr04 38 216 1098 1276 F 179 100.00 256 ambiguous_tel 1 ALIGNMENT 0 YS2-17c02.q1k vc_4 62 216 5832 5831 F 155 0.00 256 reject_low 12 ALIGNMENT 40 YS2-17c02.q1k vc_1 256 217 2472 2511 C 40 100.00 256 reject_low 10 ALIGNMENT 39 YS2-17c02.q1k vc_5 256 218 5025 5063 C 39 100.00 256 reject_low 13 ALIGNMENT 0 YS2-17c02.q1k chr08 204 256 5862 5861 F 53 0.00 256 reject_low 8 ALIGNMENT 176 YS2-17c02.q1k chr14 38 216 7622 7800 F 179 99.44 256 ambiguous_tel 4 ALIGNMENT 179 YS2-17c02.q1k chr02 216 38 812004 812182 C 179 100.00 256 ambiguous_tel 0 ALIGNMENT 114 YS2-17c02.q1k chr08 39 203 5700 5862 F 165 90.30 256 reject_low 8 ALIGNMENT 0 YS2-17c02.q1k chr10 256 217 744446 744445 C 40 0.00 256 ambiguous_tel 3 ALIGNMENT 0 YS2-17c03.q1k chr02 105 663 65979 65978 F 559 0.00 1383 reject_low 2 ALIGNMENT 61 YS2-17c03.q1k chr02 150 41 464073 464182 C 110 92.73 1383|12,0 accept 0 ALIGNMENT 24 YS2-17c03.q1k chr16 99 62 462792 462829 C 38 94.74 1383 reject_low 3 ALIGNMENT 36 YS2-17c03.q1k chr15 55 129 236279 236353 F 75 89.33 1383 reject_low 1 ALIGNMENT 24 YS2-17c03.q1k chr02 56 104 65931 65979 F 49 89.80 1383 reject_low 2 ALIGNMENT 0 YS2-17c03.q1k chr15 130 663 236353 236352 F 534 0.00 1383 reject_low 1 ALIGNMENT 958 YS2-17c03.p1k chr02 26 1104 462889 463971 F 1079 97.68 1326 accept 0 ALIGNMENT 761 YS2-17c03.q1k chr02 1161 126 462985 464028 C 1036 92.28 1383|0,13 accept 0 ALIGNMENT 0 YS2-17c03.q1k chr02 138 139 464016 464084 C 0 0.00 1383 accept 0 ALIGNMENT 0 YS2-17c03.q1k chr16 663 100 462793 462792 C 564 0.00 1383 reject_low 3 ALIGNMENT 0 YS2-17c04.p1k chr06 62 430 33402 33401 F 369 0.00 1430 reject_low 1 ALIGNMENT 984 YS2-17c04.p1k chr15 1176 32 76094 77246 C 1145 96.24 1430 accept 0 ALIGNMENT 486 YS2-17c04.q1k chr06 1029 41 33498 34489 C 989 84.23 1362 reject_low 1 ALIGNMENT 216 YS2-17c04.p1k chr06 431 837 33402 33808 F 407 84.77 1430 reject_low 1 ALIGNMENT 959 YS2-17c04.q1k chr15 39 1137 75759 76874 F 1099 97.00 1362 accept 0 ALIGNMENT 0 YS2-17c04.p1k chr06 838 886 33808 33807 F 49 0.00 1430 reject_low 1 ALIGNMENT 942 YS2-17c07.q1k chr16 1137 33 27582 28694 C 1105 96.11 1330 accept 0 ALIGNMENT 924 YS2-17c07.p1k chr16 29 1122 23528 24635 F 1094 95.98 1333 accept 0 ALIGNMENT 104 YS2-17c07.p1k chr12 149 841 18654 19346 F 693 72.29 1333 reject_low 1 ALIGNMENT 0 YS2-17c07.p1k chr12 62 148 18654 18653 F 87 0.00 1333 reject_low 1 ALIGNMENT 0 YS2-17c07.p1k chr12 842 872 19346 19345 F 31 0.00 1333 reject_low 1 ALIGNMENT 62 YS2-17c09.p1k chr07 1202 984 519169 519400 C 219 78.54 1365 reject_low 4 ALIGNMENT 92 YS2-17c09.p1k chr07 1182 933 519040 519298 C 250 80.80 1365 reject_low 2 ALIGNMENT 72 YS2-17c09.p1k chr07 1140 933 519037 519247 C 208 79.33 1365 reject_low 3 ALIGNMENT 0 YS2-17c09.p1k chr07 932 62 519248 519247 C 871 0.00 1365 reject_low 3 ALIGNMENT 101 YS2-17c09.p1k chr07 1202 933 519067 519349 C 270 81.48 1365 reject_low 1 ALIGNMENT 0 YS2-17c09.p1k chr07 983 62 519401 519400 C 922 0.00 1365 reject_low 4 ALIGNMENT 0 YS2-17c09.p1k chr07 932 62 519197 519196 C 871 0.00 1365 reject_low 5 ALIGNMENT 0 YS2-17c09.p1k chr07 932 62 519350 519349 C 871 0.00 1365 reject_low 1 ALIGNMENT 1014 YS2-17c09.q1k chr07 35 1177 515355 516511 F 1143 97.46 1370 accept 0 ALIGNMENT 59 YS2-17c09.p1k chr07 1092 933 519037 519196 C 160 79.38 1365 reject_low 5 ALIGNMENT 1024 YS2-17c09.p1k chr07 1202 25 519118 520308 C 1178 96.35 1365 accept 0 ALIGNMENT 0 YS2-17c09.p1k chr07 932 62 519299 519298 C 871 0.00 1365 reject_low 2 ALIGNMENT 1050 YS2-17c10.q1k chr10 39 1223 509233 510430 F 1185 97.13 1422 accept_chi 0 ALIGNMENT 1029 YS2-17c10.p1k chr07 1187 29 937384 938556 C 1159 97.07 1456 accept_chi 1 ALIGNMENT 214 YS2-17c11.p1k chr15 176 777 797906 798493 F 602 81.73 1418 accept 0 ALIGNMENT 920 YS2-17c11.q1k chr15 1166 40 801567 802702 C 1127 94.94 1346 accept 0 ALIGNMENT 0 YS2-17c12.q1k vc_4 237 62 6340 6339 C 176 0.00 856 reject_low 14 ALIGNMENT 145 YS2-17c12.p1k vc_6 1 338 3712 4063 F 338 83.14 661 reject_low 5 ALIGNMENT 0 YS2-17c12.q1k vc_7 304 304 4700 4921 C 1 0.00 856 reject_low 12 ALIGNMENT 145 YS2-17c12.p1k vc_3 338 1 1398 1749 C 338 83.14 661 reject_low 4 ALIGNMENT 145 YS2-17c12.p1k vc_7 1 338 13918 14269 F 338 83.14 661 reject_low 6 ALIGNMENT 295 YS2-17c12.q1k vc_2 1 303 2322 2624 F 303 99.34 856 reject_low 10 ALIGNMENT 70 YS2-17c12.q1k vc_7 416 305 4583 4699 C 112 89.29 856 reject_low 12 ALIGNMENT 0 YS2-17c12.q1k vc_4 237 62 113 112 C 176 0.00 856 reject_low 13 ALIGNMENT 145 YS2-17c12.p1k vc_5 338 1 4318 4669 C 338 83.14 661 reject_vc 0 ALIGNMENT 62 YS2-17c12.q1k vc_4 304 238 46 112 C 67 98.51 856 reject_low 13 ALIGNMENT 0 YS2-17c12.q1k vc_4 62 237 1548 1547 F 176 0.00 856 reject_low 8 ALIGNMENT 492 YS2-17c12.q1k vc_7 664 1 1890 2569 C 664 92.17 856 reject_vc 1 ALIGNMENT 51 YS2-17c12.q1k vc_7 54 3 6360 6411 C 52 100.00 856|1,0 reject_low 12 ALIGNMENT 190 YS2-17c12.q1k vc_4 308 664 1879 2251 F 357 86.55 856 reject_low 8 ALIGNMENT 295 YS2-17c12.q1k vc_3 1 303 2689 2991 F 303 99.34 856 reject_low 11 ALIGNMENT 62 YS2-17c12.q1k vc_4 304 238 6273 6339 C 67 98.51 856 reject_low 14 ALIGNMENT 62 YS2-17c12.q1k vc_4 238 304 1548 1614 F 67 98.51 856 reject_low 8 ALIGNMENT 492 YS2-17c12.q1k vc_5 1 664 2556 3235 F 664 92.47 856 reject_vc 0 ALIGNMENT 145 YS2-17c12.p1k vc_1 338 1 1398 1749 C 338 83.14 661 reject_low 2 ALIGNMENT 0 YS2-17c12.q1k vc_4 305 307 1615 1878 F 3 0.00 856 reject_low 8 ALIGNMENT 145 YS2-17c12.p1k vc_7 1 338 456 807 F 338 83.14 661 reject_vc 1 ALIGNMENT 145 YS2-17c12.p1k vc_2 338 1 1398 1749 C 338 83.14 661 reject_low 3 ALIGNMENT 0 YS2-17c12.q1k vc_7 53 54 5172 6360 C 0 0.00 856 reject_low 12 ALIGNMENT 241 YS2-17c12.q1k vc_7 303 53 4922 5172 C 251 98.80 856|0,1 reject_low 12 ALIGNMENT 295 YS2-17c12.q1k vc_1 1 303 2689 2991 F 303 99.34 856 reject_low 9 ALIGNMENT 361 YS2-17c12.q1k vc_4 416 1 5232 5654 C 416 96.15 856 reject_low 7 ALIGNMENT 41 YS2-17c13.q1k vc_4 536 576 5831 5871 F 41 100.00 576 reject_low 5 ALIGNMENT 476 YS2-17c13.p1k chr08 28 524 500323 500820 F 497 99.60 543 accept_chi 0 ALIGNMENT 41 YS2-17c13.q1k vc_1 576 536 2472 2512 C 41 100.00 576 reject_low 2 ALIGNMENT 41 YS2-17c13.q1k vc_3 576 536 2472 2512 C 41 100.00 576 reject_low 4 ALIGNMENT 476 YS2-17c13.q1k chr08 536 39 500323 500820 C 498 99.40 576 accept_chi 1 ALIGNMENT 0 YS2-17c13.q1k vc_5 537 62 37 36 C 476 0.00 576 reject_low 8 ALIGNMENT 0 YS2-17c13.q1k vc_5 537 62 5064 5063 C 476 0.00 576 reject_low 6 ALIGNMENT 0 YS2-17c13.q1k vc_1 535 62 2513 2512 C 474 0.00 576 reject_low 2 ALIGNMENT 36 YS2-17c13.q1k vc_5 573 538 1 36 C 36 100.00 576 reject_low 8 ALIGNMENT 0 YS2-17c13.p1k chr08 525 543 500820 500819 F 19 0.00 543 accept_chi 0 ALIGNMENT 0 YS2-17c13.q1k vc_2 535 62 2146 2145 C 474 0.00 576 reject_low 3 ALIGNMENT 0 YS2-17c13.q1k chr08 576 537 500324 500323 C 40 0.00 576 accept_chi 1 ALIGNMENT 41 YS2-17c13.q1k vc_2 576 536 2105 2145 C 41 100.00 576 reject_low 3 ALIGNMENT 39 YS2-17c13.q1k vc_5 576 538 5025 5063 C 39 100.00 576 reject_low 6 ALIGNMENT 0 YS2-17c13.q1k vc_7 62 538 13525 13524 F 477 0.00 576 reject_low 7 ALIGNMENT 38 YS2-17c13.q1k vc_7 539 576 13525 13562 F 38 100.00 576 reject_low 7 ALIGNMENT 0 YS2-17c13.q1k vc_3 535 62 2513 2512 C 474 0.00 576 reject_low 4 ALIGNMENT 0 YS2-17c13.q1k vc_4 62 535 5831 5830 F 474 0.00 576 reject_low 5 ALIGNMENT 872 YS2-17c14.q1k chr15 31 964 42081 43014 F 934 98.61 1395|0,1 accept 0 ALIGNMENT 0 YS2-17c14.q1k chr15 964 963 43014 43056 F 0 0.00 1395 accept 0 ALIGNMENT 956 YS2-17c14.p1k chr15 1225 28 45368 46594 C 1198 94.49 1419 accept 0 ALIGNMENT 130 YS2-17c14.q1k chr15 963 1196 43056 43305 F 234 87.18 1395|1,0 accept 0 ALIGNMENT 974 YS2-17c15.q1k chr12 1089 40 465244 466308 C 1050 98.29 1292 accept 1 ALIGNMENT 999 YS2-17c15.p1k chr12 51 1195 455140 456281 F 1145 96.33 1418 accept 0 ALIGNMENT 974 YS2-17c15.q1k chr12 1089 40 456107 457171 C 1050 98.29 1292 accept 0 ALIGNMENT 999 YS2-17c15.p1k chr12 51 1195 464277 465418 F 1145 96.33 1418 accept 1 ALIGNMENT 0 YS2-17c16.p1k chr16 801 62 108074 108073 C 740 0.00 1338 reject_low 1 ALIGNMENT 86 YS2-17c16.p1k chr16 1043 802 107829 108073 C 242 80.58 1338 reject_low 1 ALIGNMENT 951 YS2-17c16.p1k chr13 28 1084 626221 627290 F 1057 98.11 1338 accept 0 ALIGNMENT 948 YS2-17c16.q1k chr13 1114 40 629561 630641 C 1075 97.40 1368 accept 0 ALIGNMENT 842 YS2-17c18.q1k chr04 1095 35 1025389 1026464 C 1061 94.82 1333 accept 0 ALIGNMENT 754 YS2-17c18.p1k chr04 58 1078 1024923 1025952 F 1021 92.56 1388 accept 0 ALIGNMENT 51 YS2-17c19.q1k vc_7 54 3 6360 6411 C 52 100.00 823|1,0 reject_vc 8 ALIGNMENT 483 YS2-17c19.q1k vc_5 1 664 2556 3234 F 664 91.87 823 reject_vc 1 ALIGNMENT 302 YS2-17c19.q1k vc_3 1 303 2689 2991 F 303 100.00 823 reject_vc 6 ALIGNMENT 175 YS2-17c19.p1k chr07 297 64 479332 479561 C 234 95.30 317 accept 0 ALIGNMENT 247 YS2-17c19.q1k vc_7 303 53 4922 5172 C 251 99.60 823|0,1 reject_vc 8 ALIGNMENT 99 YS2-17c19.q1k vc_7 421 305 4583 4699 C 117 95.73 823 reject_vc 8 ALIGNMENT 302 YS2-17c19.q1k vc_1 1 303 2689 2991 F 303 100.00 823 reject_vc 4 ALIGNMENT 0 YS2-17c19.q1k vc_4 237 62 6340 6339 C 176 0.00 823 reject_low 10 ALIGNMENT 172 YS2-17c19.q1k vc_4 308 664 1879 2250 F 357 84.87 823 reject_vc 7 ALIGNMENT 65 YS2-17c19.q1k vc_4 238 304 1548 1614 F 67 100.00 823 reject_vc 7 ALIGNMENT 0 YS2-17c19.q1k vc_4 237 62 113 112 C 176 0.00 823 reject_low 9 ALIGNMENT 0 YS2-17c19.q1k vc_4 62 237 1548 1547 F 176 0.00 823 reject_vc 7 ALIGNMENT 0 YS2-17c19.q1k vc_4 305 307 1615 1878 F 3 0.00 823 reject_vc 7 ALIGNMENT 476 YS2-17c19.q1k vc_7 610 1 1950 2569 C 610 93.44 823 reject_vc 2 ALIGNMENT 0 YS2-17c19.q1k vc_7 53 54 5172 6360 C 0 0.00 823 reject_vc 8 ALIGNMENT 0 YS2-17c19.p1k chr07 317 298 479333 479332 C 20 0.00 317 accept 0 ALIGNMENT 0 YS2-17c19.q1k vc_7 304 304 4700 4921 C 1 0.00 823 reject_vc 8 ALIGNMENT 398 YS2-17c19.q1k vc_4 421 1 5232 5654 C 421 98.34 823 reject_vc 3 ALIGNMENT 302 YS2-17c19.q1k vc_2 1 303 2322 2624 F 303 100.00 823 reject_vc 5 ALIGNMENT 65 YS2-17c19.q1k vc_4 304 238 6273 6339 C 67 100.00 823 reject_low 10 ALIGNMENT 65 YS2-17c19.q1k vc_4 304 238 46 112 C 67 100.00 823 reject_low 9 ALIGNMENT 0 YS2-17c20.q1k vc_3 187 62 2514 2513 C 126 0.00 229 reject_low 3 ALIGNMENT 36 YS2-17c20.q1k vc_5 226 191 1 36 C 36 100.00 229 reject_low 7 ALIGNMENT 38 YS2-17c20.q1k vc_7 192 229 13525 13562 F 38 100.00 229 reject_low 6 ALIGNMENT 0 YS2-17c20.q1k chr04 229 190 1091531 1091530 C 40 0.00 229 accept 0 ALIGNMENT 39 YS2-17c20.q1k vc_5 229 191 5025 5063 C 39 100.00 229 reject_low 5 ALIGNMENT 0 YS2-17c20.q1k vc_4 62 187 5830 5829 F 126 0.00 229 reject_low 4 ALIGNMENT 149 YS2-17c20.q1k chr04 189 39 1091530 1091680 C 151 100.00 229 accept 0 ALIGNMENT 0 YS2-17c20.q1k vc_5 190 62 37 36 C 129 0.00 229 reject_low 7 ALIGNMENT 0 YS2-17c20.q1k vc_7 62 191 13525 13524 F 130 0.00 229 reject_low 6 ALIGNMENT 0 YS2-17c20.q1k vc_2 187 62 2147 2146 C 126 0.00 229 reject_low 2 ALIGNMENT 0 YS2-17c20.q1k vc_1 187 62 2514 2513 C 126 0.00 229 reject_low 1 ALIGNMENT 42 YS2-17c20.q1k vc_4 188 229 5830 5871 F 42 100.00 229 reject_low 4 ALIGNMENT 42 YS2-17c20.q1k vc_3 229 188 2472 2513 C 42 100.00 229 reject_low 3 ALIGNMENT 42 YS2-17c20.q1k vc_2 229 188 2105 2146 C 42 100.00 229 reject_low 2 ALIGNMENT 42 YS2-17c20.q1k vc_1 229 188 2472 2513 C 42 100.00 229 reject_low 1 ALIGNMENT 0 YS2-17c20.q1k vc_5 190 62 5064 5063 C 129 0.00 229 reject_low 5 ALIGNMENT 0 YS2-17c21.q1k vc_4 62 883 5831 5830 F 822 0.00 1272 reject_low 7 ALIGNMENT 41 YS2-17c21.q1k vc_1 924 884 2472 2512 C 41 100.00 1272 reject_low 8 ALIGNMENT 127 YS2-17c21.q1k vc_1 924 1194 2531 2812 F 271 84.50 1272 reject_low 2 ALIGNMENT 55 YS2-17c21.q1k vc_4 1009 924 1446 1534 C 86 91.86 1272 reject_low 9 ALIGNMENT 96 YS2-17c21.q1k vc_4 924 1073 6353 6509 F 150 90.67 1272|1,0 reject_low 7 ALIGNMENT 0 YS2-17c21.q1k vc_5 62 923 2398 2397 F 862 0.00 1272 reject_low 3 ALIGNMENT 127 YS2-17c21.q1k vc_7 1194 924 2446 2727 C 271 85.24 1272 reject_low 4 ALIGNMENT 122 YS2-17c21.q1k vc_4 1194 924 5529 5812 C 271 84.87 1272 reject_low 5 ALIGNMENT 0 YS2-17c21.q1k vc_4 923 62 1535 1534 C 862 0.00 1272 reject_low 9 ALIGNMENT 0 YS2-17c21.q1k vc_4 923 62 5813 5812 C 862 0.00 1272 reject_low 5 ALIGNMENT 96 YS2-17c21.q1k vc_4 924 1073 126 282 F 150 90.67 1272 reject_low 6 ALIGNMENT 127 YS2-17c21.q1k vc_5 924 1194 2398 2679 F 271 84.50 1272 reject_low 3 ALIGNMENT 0 YS2-17c21.q1k vc_5 885 62 5064 5063 C 824 0.00 1272 reject_low 10 ALIGNMENT 0 YS2-17c21.q1k vc_7 923 62 2728 2727 C 862 0.00 1272 reject_low 4 ALIGNMENT 787 YS2-17c21.p1k chr15 63 915 997993 998840 F 853 98.71 916 accept_chi 1 ALIGNMENT 0 YS2-17c21.q1k vc_1 883 62 2513 2512 C 822 0.00 1272 reject_low 8 ALIGNMENT 39 YS2-17c21.q1k vc_5 924 886 5025 5063 C 39 100.00 1272 reject_low 10 ALIGNMENT 0 YS2-17c21.q1k vc_4 925 924 5872 6353 F 0 0.00 1272 reject_low 7 ALIGNMENT 0 YS2-17c21.q1k vc_4 62 923 126 125 F 862 0.00 1272 reject_low 6 ALIGNMENT 0 YS2-17c21.q1k vc_1 62 923 2531 2530 F 862 0.00 1272 reject_low 2 ALIGNMENT 41 YS2-17c21.q1k vc_4 884 924 5831 5871 F 41 100.00 1272 reject_low 7 ALIGNMENT 0 YS2-17c21.q1k vc_5 885 62 37 36 C 824 0.00 1272 reject_low 11 ALIGNMENT 793 YS2-17c21.q1k chr15 884 31 997993 998840 C 854 98.83 1272 accept_chi 0 ALIGNMENT 36 YS2-17c21.q1k vc_5 921 886 1 36 C 36 100.00 1272 reject_low 11 ALIGNMENT 0 YS2-17c22.q1k vc_4 305 310 1615 1881 F 6 0.00 731 reject_low 12 ALIGNMENT 263 YS2-17c22.q1k vc_2 1 303 2322 2624 F 303 95.71 731 reject_low 9 ALIGNMENT 62 YS2-17c22.q1k vc_4 238 304 1548 1614 F 67 98.51 731 reject_low 12 ALIGNMENT 0 YS2-17c22.q1k vc_7 53 54 5172 6360 C 0 0.00 731 reject_low 11 ALIGNMENT 51 YS2-17c22.q1k vc_7 54 3 6360 6411 C 52 100.00 731|1,0 reject_low 11 ALIGNMENT 60 YS2-17c22.q1k vc_7 412 311 4589 4693 C 102 87.25 731 reject_low 11 ALIGNMENT 273 YS2-17c22.p1k vc_1 420 1 1320 1749 C 420 89.29 584 reject_low 2 ALIGNMENT 0 YS2-17c22.q1k vc_7 310 304 4694 4921 C 7 0.00 731 reject_low 11 ALIGNMENT 273 YS2-17c22.p1k vc_3 420 1 1320 1749 C 420 89.29 584 reject_low 4 ALIGNMENT 273 YS2-17c22.p1k vc_5 420 1 4240 4669 C 420 89.29 584 reject_vc 0 ALIGNMENT 273 YS2-17c22.p1k vc_6 1 420 3712 4141 F 420 89.52 584 reject_low 5 ALIGNMENT 317 YS2-17c22.q1k vc_4 412 1 5238 5654 C 412 92.72 731 reject_low 7 ALIGNMENT 85 YS2-17c22.q1k vc_4 311 502 1882 2082 F 192 83.33 731 reject_low 12 ALIGNMENT 267 YS2-17c22.p1k vc_7 1 420 456 885 F 420 89.05 584 reject_vc 1 ALIGNMENT 62 YS2-17c22.q1k vc_4 304 238 6273 6339 C 67 98.51 731 reject_low 14 ALIGNMENT 62 YS2-17c22.q1k vc_4 304 238 46 112 C 67 98.51 731 reject_low 13 ALIGNMENT 267 YS2-17c22.p1k vc_7 1 420 13918 14347 F 420 89.05 584 reject_low 6 ALIGNMENT 273 YS2-17c22.p1k vc_2 420 1 1320 1749 C 420 89.29 584 reject_low 3 ALIGNMENT 263 YS2-17c22.q1k vc_1 1 303 2689 2991 F 303 95.71 731 reject_low 8 ALIGNMENT 209 YS2-17c22.q1k vc_7 303 53 4922 5172 C 251 94.42 731|0,1 reject_low 11 ALIGNMENT 263 YS2-17c22.q1k vc_3 1 303 2689 2991 F 303 95.71 731 reject_low 10 ALIGNMENT 349 YS2-17c22.q1k vc_5 1 502 2556 3066 F 502 90.64 731 reject_vc 0 ALIGNMENT 340 YS2-17c22.q1k vc_7 477 1 2087 2569 C 477 90.99 731 reject_vc 1 ALIGNMENT 952 YS2-17c23.q1k chr12 45 1216 55528 56726 F 1172 95.31 1233 accept 0 ALIGNMENT 980 YS2-17c23.p1k chr12 1130 34 57235 58337 C 1097 97.45 1226 accept 0 ALIGNMENT 983 YS2-17c24.q1k chr05 1170 40 575486 576634 C 1131 96.55 1301 reject_low 15 ALIGNMENT 1026 YS2-17c24.p1k chr13 1157 30 3897 5029 C 1128 97.87 1272 reject_low 9 ALIGNMENT 961 YS2-17c24.q1k chr08 1170 40 561010 562161 C 1131 95.93 1301 reject_low 14 ALIGNMENT 979 YS2-17c24.p1k chr02 1157 30 4222 5365 C 1128 96.54 1272 reject_low 12 ALIGNMENT 931 YS2-17c24.q1k chr12 40 1210 369 1560 F 1171 94.45 1301 accept_tel 0 ALIGNMENT 970 YS2-17c24.q1k chr12 1170 40 1076858 1078009 C 1131 96.20 1301 reject_low 2 ALIGNMENT 970 YS2-17c24.q1k chr15 1170 40 1089822 1090973 C 1131 96.20 1301 reject_low 3 ALIGNMENT 970 YS2-17c24.q1k chr04 1170 40 1530657 1531808 C 1131 96.20 1301 reject_low 1 ALIGNMENT 973 YS2-17c24.q1k chr10 40 1170 356 1500 F 1131 96.29 1301 reject_low 5 ALIGNMENT 959 YS2-17c24.p1k chr16 1204 30 4828 6018 C 1175 95.06 1272 reject_low 7 ALIGNMENT 983 YS2-17c24.q1k chr16 1170 40 946663 947811 C 1131 96.55 1301 reject_low 13 ALIGNMENT 686 YS2-17c24.p1k chr05 1204 30 4923 6040 C 1175 89.62 1272 reject_low 17 ALIGNMENT 961 YS2-17c24.q1k chr13 40 1170 347 1498 F 1131 95.93 1301 reject_low 9 ALIGNMENT 973 YS2-17c24.q1k chr09 40 1170 373 1517 F 1131 96.29 1301 reject_low 4 ALIGNMENT 977 YS2-17c24.p1k chr10 1204 30 5291 6481 C 1175 95.57 1272 reject_low 5 ALIGNMENT 751 YS2-17c24.p1k chr12 30 1204 1065626 1066760 F 1175 90.89 1272 reject_low 16 ALIGNMENT 951 YS2-17c24.p1k chr16 30 1157 943017 944156 F 1128 95.92 1272 reject_low 13 ALIGNMENT 967 YS2-17c24.q1k chr02 40 1170 166 1317 F 1131 96.11 1301 reject_low 12 ALIGNMENT 959 YS2-17c24.p1k chr07 30 1204 1084859 1086049 F 1175 95.06 1272 reject_low 6 ALIGNMENT 1044 YS2-17c24.p1k chr12 30 1204 1072159 1073344 F 1175 97.28 1272 reject_low 2 ALIGNMENT 1026 YS2-17c24.p1k chr12 1157 30 4021 5153 C 1128 97.87 1272 accept_tel 0 ALIGNMENT 0 YS2-17c24.q1k chr06 62 462 2 1 F 401 0.00 1301 reject_low 18 ALIGNMENT 961 YS2-17c24.q1k chr12 40 1170 6006 7157 F 1131 95.93 1301 reject_low 8 ALIGNMENT 977 YS2-17c24.q1k chr14 40 1170 257 1405 F 1131 96.37 1301 reject_low 10 ALIGNMENT 806 YS2-17c24.p1k chr05 30 1204 570823 571972 F 1175 92.00 1272 reject_low 15 ALIGNMENT 983 YS2-17c24.q1k chr07 1170 40 1089563 1090711 C 1131 96.55 1301 reject_low 6 ALIGNMENT 946 YS2-17c24.q1k chr05 40 1170 150 1301 F 1131 95.49 1301 reject_low 17 ALIGNMENT 1026 YS2-17c24.p1k chr12 1157 30 9556 10688 C 1128 97.87 1272 reject_low 8 ALIGNMENT 959 YS2-17c24.p1k chr14 1204 30 4919 6109 C 1175 95.06 1272 reject_low 10 ALIGNMENT 983 YS2-17c24.q1k chr16 40 1170 166 1314 F 1131 96.55 1301 reject_low 7 ALIGNMENT 961 YS2-17c24.q1k chr08 40 1170 331 1482 F 1131 95.93 1301 reject_low 11 ALIGNMENT 974 YS2-17c24.p1k chr08 30 1157 557467 558609 F 1128 96.45 1272 reject_low 14 ALIGNMENT 957 YS2-17c24.p1k chr06 1157 30 3058 4197 C 1128 96.10 1272 reject_low 18 ALIGNMENT 970 YS2-17c24.q1k chr12 1170 40 1070195 1071346 C 1131 96.20 1301 reject_low 16 ALIGNMENT 1044 YS2-17c24.p1k chr15 30 1204 1085123 1086308 F 1175 97.28 1272 reject_low 3 ALIGNMENT 591 YS2-17c24.q1k chr06 463 1170 2 724 F 708 95.48 1301 reject_low 18 ALIGNMENT 1013 YS2-17c24.p1k chr08 1157 30 3753 4886 C 1128 97.52 1272 reject_low 11 ALIGNMENT 1044 YS2-17c24.p1k chr04 30 1204 1525958 1527143 F 1175 97.28 1272 reject_low 1 ALIGNMENT 977 YS2-17c24.p1k chr09 1204 30 5308 6498 C 1175 95.57 1272 reject_low 4 ALIGNMENT 973 YS2-17d01.q1k chr10 1141 30 41958 43082 C 1112 97.48 1371 accept 0 ALIGNMENT 873 YS2-17d01.p1k chr10 34 1083 38253 39315 F 1050 95.71 1390 accept 0 ALIGNMENT 0 YS2-17d02.p1k vc_4 62 775 5871 5870 F 714 0.00 1400 reject_low 8 ALIGNMENT 0 YS2-17d02.p1k vc_2 775 62 2106 2105 C 714 0.00 1400 reject_low 3 ALIGNMENT 26 YS2-17d02.p1k vc_3 806 776 2441 2472 C 31 96.77 1400 reject_low 10 ALIGNMENT 242 YS2-17d02.p1k vc_5 1153 776 4634 5025 C 378 89.68 1400 reject_low 5 ALIGNMENT 0 YS2-17d02.p1k vc_7 62 775 13562 13561 F 714 0.00 1400 reject_low 7 ALIGNMENT 242 YS2-17d02.p1k vc_1 1153 776 1714 2105 C 378 89.68 1400 reject_low 2 ALIGNMENT 0 YS2-17d02.p1k vc_5 775 62 5026 5025 C 714 0.00 1400 reject_low 5 ALIGNMENT 0 YS2-17d02.p1k vc_7 62 775 100 99 F 714 0.00 1400 reject_low 6 ALIGNMENT 242 YS2-17d02.p1k vc_7 776 1153 100 491 F 378 89.68 1400 reject_low 6 ALIGNMENT 499 YS2-17d02.q1k chr05 72 802 565028 565750 F 731 90.70 803 ambiguous_tel 1 ALIGNMENT 242 YS2-17d02.p1k vc_7 776 1153 13562 13953 F 378 89.68 1400 reject_low 7 ALIGNMENT 0 YS2-17d02.p1k vc_1 775 62 2106 2105 C 714 0.00 1400 reject_low 2 ALIGNMENT 0 YS2-17d02.p1k vc_1 775 62 2473 2472 C 714 0.00 1400 reject_low 9 ALIGNMENT 0 YS2-17d02.p1k vc_3 830 807 2442 2441 C 24 0.00 1400 reject_low 10 ALIGNMENT 0 YS2-17d02.p1k vc_1 830 807 2442 2441 C 24 0.00 1400 reject_low 9 ALIGNMENT 242 YS2-17d02.p1k vc_2 1153 776 1714 2105 C 378 89.68 1400 reject_low 3 ALIGNMENT 583 YS2-17d02.p1k chr05 757 32 565028 565750 C 726 94.49 1400 ambiguous_tel 0 ALIGNMENT 0 YS2-17d02.p1k vc_3 775 62 2473 2472 C 714 0.00 1400 reject_low 10 ALIGNMENT 0 YS2-17d02.p1k chr05 830 758 565029 565028 C 73 0.00 1400 ambiguous_tel 0 ALIGNMENT 26 YS2-17d02.p1k vc_1 806 776 2441 2472 C 31 96.77 1400 reject_low 9 ALIGNMENT 239 YS2-17d02.p1k vc_4 776 1106 5871 6209 F 331 92.15 1400 reject_low 8 ALIGNMENT 242 YS2-17d02.p1k vc_3 1153 776 1714 2105 C 378 89.68 1400 reject_low 4 ALIGNMENT 0 YS2-17d02.p1k vc_3 775 62 2106 2105 C 714 0.00 1400 reject_low 4 ALIGNMENT 972 YS2-17d03.q1k chr16 1118 37 911524 912623 C 1082 97.87 1357 accept 0 ALIGNMENT 998 YS2-17d03.p1k chr16 33 1173 909893 911050 F 1141 97.02 1419 accept 0 ALIGNMENT 943 YS2-17d04.q1k chr14 29 1138 369760 370885 F 1110 96.22 1360 accept 0 ALIGNMENT 944 YS2-17d04.p1k chr14 1139 30 371109 372230 C 1110 95.95 1362 accept 0 ALIGNMENT 971 YS2-17d05.p1k chr04 57 1135 1244067 1245156 F 1079 96.94 1547 accept 0 ALIGNMENT 935 YS2-17d05.q1k chr15 1179 131 576567 577629 C 1049 96.85 1359 reject_low 1 ALIGNMENT 0 YS2-17d05.q1k chr15 130 62 577630 577629 C 69 0.00 1359 reject_low 1 ALIGNMENT 974 YS2-17d05.p1k chr15 57 1135 575945 577034 F 1079 97.03 1547 reject_low 1 ALIGNMENT 1027 YS2-17d05.q1k chr04 1179 41 1244689 1245841 C 1139 97.28 1359 accept 0 ALIGNMENT 0 YS2-17d06.p1k chr06 930 651 137719 137718 C 280 0.00 1606 ambiguous_trans_ua 47 ALIGNMENT 48 YS2-17d06.p1k chr04 878 735 992493 992636 C 144 79.86 1606 ambiguous_trans 48 ALIGNMENT 0 YS2-17d06.p1k chr04 718 930 519643 519642 F 213 0.00 1606 ambiguous_trans 12 ALIGNMENT 48 YS2-17d06.p1k chr04 735 878 871816 871959 F 144 79.86 1606 ambiguous_trans 49 ALIGNMENT 0 YS2-17d06.p1k chr15 879 930 970425 970424 F 52 0.00 1606 ambiguous_trans 32 ALIGNMENT 0 YS2-17d06.p1k chr04 732 62 651417 651416 C 671 0.00 1606 ambiguous_trans 26 ALIGNMENT 0 YS2-17d06.p1k chr01 733 62 166165 166164 C 672 0.00 1606 ambiguous_trans 43 ALIGNMENT 0 YS2-17d06.p1k chr03 879 930 84953 84952 F 52 0.00 1606 ambiguous_trans 30 ALIGNMENT 50 YS2-17d06.p1k chr15 734 878 970281 970425 F 145 80.00 1606 ambiguous_trans 32 ALIGNMENT 0 YS2-17d06.p1k chr07 718 930 569076 569075 F 213 0.00 1606 ambiguous_trans 18 ALIGNMENT 0 YS2-17d06.p1k chr03 408 62 84716 84715 C 347 0.00 1606 ambiguous_trans_ua 46 ALIGNMENT 48 YS2-17d06.p1k chr12 878 735 976442 976585 C 144 79.86 1606 ambiguous_trans 41 ALIGNMENT 0 YS2-17d06.p1k chr15 930 879 709882 709881 C 52 0.00 1606 ambiguous_trans 28 ALIGNMENT 0 YS2-17d06.p1k chr06 879 930 138051 138050 F 52 0.00 1606 ambiguous_trans 37 ALIGNMENT 0 YS2-17d06.p1k chr12 930 718 941190 941189 C 213 0.00 1606 ambiguous_trans 2 ALIGNMENT 48 YS2-17d06.p1k chr06 735 878 137908 138051 F 144 79.86 1606 ambiguous_trans 37 ALIGNMENT 0 YS2-17d06.p1k chr02 62 734 29641 29640 F 673 0.00 1606 ambiguous_trans 29 ALIGNMENT 0 YS2-17d06.p1k chr12 930 879 976443 976442 C 52 0.00 1606 ambiguous_trans 41 ALIGNMENT 414 YS2-17d06.p1k chr04 70 717 883566 884215 F 648 89.04 1606 ambiguous_trans 15 ALIGNMENT 0 YS2-17d06.p1k chr07 62 390 568750 568749 F 329 0.00 1606 ambiguous_trans 18 ALIGNMENT 0 YS2-17d06.p1k chr07 734 62 569077 569076 C 673 0.00 1606 ambiguous_trans 38 ALIGNMENT 635 YS2-17d06.p1k chr07 30 718 574018 574705 F 689 98.40 1606 ambiguous_trans 7 ALIGNMENT 0 YS2-17d06.p1k chr01 62 733 183135 183134 F 672 0.00 1606 ambiguous_trans_ua 21 ALIGNMENT 414 YS2-17d06.p1k chr12 717 70 650826 651475 C 648 89.04 1606 ambiguous_trans 16 ALIGNMENT 0 YS2-17d06.p1k chr07 719 930 574705 574704 F 212 0.00 1606 ambiguous_trans 7 ALIGNMENT 49 YS2-17d06.p1k chr07 731 878 811448 811595 F 148 79.73 1606 ambiguous_trans 25 ALIGNMENT 0 YS2-17d06.p1k chr04 871 930 992736 992735 F 60 0.00 1606 ambiguous_trans 23 ALIGNMENT 48 YS2-17d06.p1k chr04 735 878 981165 981308 F 144 79.86 1606 ambiguous_trans 36 ALIGNMENT 0 YS2-17d06.p1k chr01 930 720 183135 183134 C 211 0.00 1606 ambiguous_trans_ua 45 ALIGNMENT 92 YS2-17d06.p1k chr01 734 876 183135 183278 F 143 90.21 1606 ambiguous_trans_ua 21 ALIGNMENT 0 YS2-17d06.p1k chr01 877 930 183278 183277 F 54 0.00 1606 ambiguous_trans_ua 21 ALIGNMENT 0 YS2-17d06.p1k chr01 930 879 160433 160432 C 52 0.00 1606 ambiguous_trans 44 ALIGNMENT 0 YS2-17d06.p1k chr01 718 930 160575 160574 F 213 0.00 1606 ambiguous_trans 22 ALIGNMENT 38 YS2-17d06.p1k chr06 650 458 137718 137899 C 193 78.24 1606 ambiguous_trans_ua 47 ALIGNMENT 0 YS2-17d06.p1k chr04 930 718 871817 871816 C 213 0.00 1606 ambiguous_trans 4 ALIGNMENT 48 YS2-17d06.p1k chr04 878 735 884072 884215 C 144 79.86 1606 ambiguous_trans 35 ALIGNMENT 50 YS2-17d06.p1k chr03 734 878 84809 84953 F 145 80.00 1606 ambiguous_trans 30 ALIGNMENT 636 YS2-17d06.p1k chr03 719 30 84808 85496 C 690 98.41 1606 ambiguous_trans 5 ALIGNMENT 0 YS2-17d06.p1k chr01 399 62 183455 183454 C 338 0.00 1606 ambiguous_trans_ua 45 ALIGNMENT 25 YS2-17d06.p1k chr04 402 451 871760 871810 F 50 88.00 1606 ambiguous_trans 49 ALIGNMENT 51 YS2-17d06.p1k chr15 878 733 709881 710026 C 146 80.14 1606 ambiguous_trans 28 ALIGNMENT 48 YS2-17d06.p1k chr04 878 735 519500 519643 C 144 79.86 1606 ambiguous_trans 34 ALIGNMENT 299 YS2-17d06.p1k chr12 394 717 976262 976585 F 324 99.69 1606 ambiguous_trans 20 ALIGNMENT 0 YS2-17d06.p1k chr02 930 718 29642 29641 C 213 0.00 1606 ambiguous_trans 10 ALIGNMENT 0 YS2-17d06.p1k chr07 930 718 811453 811452 C 213 0.00 1606 ambiguous_trans 9 ALIGNMENT 0 YS2-17d06.p1k chr04 879 930 981308 981307 F 52 0.00 1606 ambiguous_trans 36 ALIGNMENT 0 YS2-17d06.p1k chr04 930 725 981160 981159 C 206 0.00 1606 ambiguous_trans 1 ALIGNMENT 0 YS2-17d06.p1k chr06 879 930 137794 137793 F 52 0.00 1606 ambiguous_trans_ua 33 ALIGNMENT 0 YS2-17d06.p1k chr06 62 807 137724 137723 F 746 0.00 1606 ambiguous_trans_ua 33 ALIGNMENT 639 YS2-17d06.p1k chr15 719 30 970280 970968 C 690 98.55 1606 ambiguous_trans 3 ALIGNMENT 643 YS2-17d06.p1k chr12 717 30 941189 941875 C 688 98.84 1606 ambiguous_trans 2 ALIGNMENT 0 YS2-17d06.p1k chr07 930 879 574562 574561 C 52 0.00 1606 ambiguous_trans 24 ALIGNMENT 72 YS2-17d06.p1k chr01 719 400 183134 183454 C 320 78.44 1606 ambiguous_trans_ua 45 ALIGNMENT 323 YS2-17d06.p1k chr01 70 718 165511 166164 F 649 84.90 1606 ambiguous_trans 17 ALIGNMENT 0 YS2-17d06.p1k chr15 732 62 710027 710026 C 671 0.00 1606 ambiguous_trans 28 ALIGNMENT 48 YS2-17d06.p1k chr12 735 878 650826 650969 F 144 79.86 1606 ambiguous_trans 39 ALIGNMENT 0 YS2-17d06.p1k chr01 719 930 166164 166163 F 212 0.00 1606 ambiguous_trans 17 ALIGNMENT 0 YS2-17d06.p1k chr12 734 62 976586 976585 C 673 0.00 1606 ambiguous_trans 41 ALIGNMENT 0 YS2-17d06.p1k chr07 930 879 568934 568933 C 52 0.00 1606 ambiguous_trans 38 ALIGNMENT 48 YS2-17d06.p1k chr12 735 878 941189 941332 F 144 79.86 1606 ambiguous_trans 40 ALIGNMENT 0 YS2-17d06.p1k chr04 452 734 871811 871815 F 283 0.00 1606 ambiguous_trans 49 ALIGNMENT 0 YS2-17d06.p1k chr12 733 62 981698 981697 C 672 0.00 1606 ambiguous_trans 31 ALIGNMENT 0 YS2-17d06.p1k chr04 930 879 651272 651271 C 52 0.00 1606 ambiguous_trans 26 ALIGNMENT 0 YS2-17d06.p1k chr05 930 879 135797 135796 C 52 0.00 1606 ambiguous_trans_ua 27 ALIGNMENT 634 YS2-17d06.p1k chr07 717 30 811452 812138 C 688 98.40 1606 ambiguous_trans 9 ALIGNMENT 0 YS2-17d06.p1k chr04 718 930 884215 884214 F 213 0.00 1606 ambiguous_trans 15 ALIGNMENT 0 YS2-17d06.p1k chr14 718 930 567993 567992 F 213 0.00 1606 ambiguous_trans 11 ALIGNMENT 51 YS2-17d06.p1k chr02 735 878 29641 29784 F 144 80.56 1606 ambiguous_trans 29 ALIGNMENT 0 YS2-17d06.p1k chr01 930 879 166021 166020 C 52 0.00 1606 ambiguous_trans 43 ALIGNMENT 0 YS2-17d06.p1k chr12 62 734 650826 650825 F 673 0.00 1606 ambiguous_trans 39 ALIGNMENT 302 YS2-17d06.p1k chr07 391 717 568750 569076 F 327 99.69 1606 ambiguous_trans 18 ALIGNMENT 0 YS2-17d06.p1k chr07 723 62 574716 574715 C 662 0.00 1606 ambiguous_trans 24 ALIGNMENT 0 YS2-17d06.p1k chr12 62 734 941189 941188 F 673 0.00 1606 ambiguous_trans 40 ALIGNMENT 0 YS2-17d06.p1k chr03 930 720 84809 84808 C 211 0.00 1606 ambiguous_trans 5 ALIGNMENT 0 YS2-17d06.p1k chr06 62 734 137908 137907 F 673 0.00 1606 ambiguous_trans 37 ALIGNMENT 0 YS2-17d06.p1k chr04 734 667 992637 992650 C 68 0.00 1606 ambiguous_trans 48 ALIGNMENT 0 YS2-17d06.p1k chr04 930 879 884073 884072 C 52 0.00 1606 ambiguous_trans 35 ALIGNMENT 49 YS2-17d06.p1k chr07 878 724 574561 574715 C 155 79.35 1606 ambiguous_trans 24 ALIGNMENT 0 YS2-17d06.p1k chr12 879 930 650969 650968 F 52 0.00 1606 ambiguous_trans 39 ALIGNMENT 0 YS2-17d06.p1k chr02 879 930 29784 29783 F 52 0.00 1606 ambiguous_trans 29 ALIGNMENT 300 YS2-17d06.p1k chr05 391 718 135613 135940 F 328 99.39 1606 ambiguous_trans_ua 19 ALIGNMENT 638 YS2-17d06.p1k chr12 30 718 981010 981697 F 689 98.55 1606 ambiguous_trans 6 ALIGNMENT 0 YS2-17d06.p1k chr04 581 62 992737 992736 C 520 0.00 1606 ambiguous_trans 48 ALIGNMENT 408 YS2-17d06.p1k chr04 70 717 991987 992636 F 648 88.73 1606 ambiguous_trans 23 ALIGNMENT 0 YS2-17d06.p1k chr04 62 401 871760 871759 F 340 0.00 1606 ambiguous_trans 49 ALIGNMENT 0 YS2-17d06.p1k chr03 62 733 84809 84808 F 672 0.00 1606 ambiguous_trans 30 ALIGNMENT 0 YS2-17d06.p1k chr12 719 930 981697 981696 F 212 0.00 1606 ambiguous_trans 6 ALIGNMENT 0 YS2-17d06.p1k chr12 62 393 976262 976261 F 332 0.00 1606 ambiguous_trans 20 ALIGNMENT 0 YS2-17d06.p1k chr14 734 62 567994 567993 C 673 0.00 1606 ambiguous_trans_ua 42 ALIGNMENT 53 YS2-17d06.p1k chr06 808 878 137724 137794 F 71 94.37 1606 ambiguous_trans_ua 33 ALIGNMENT 42 YS2-17d06.p1k chr01 878 735 160432 160575 C 144 78.47 1606 ambiguous_trans 44 ALIGNMENT 0 YS2-17d06.p1k chr04 734 62 884216 884215 C 673 0.00 1606 ambiguous_trans 35 ALIGNMENT 0 YS2-17d06.p1k chr03 930 497 84627 84626 C 434 0.00 1606 ambiguous_trans_ua 46 ALIGNMENT 0 YS2-17d06.p1k chr12 718 930 976585 976584 F 213 0.00 1606 ambiguous_trans 20 ALIGNMENT 0 YS2-17d06.p1k chr07 879 930 811595 811594 F 52 0.00 1606 ambiguous_trans 25 ALIGNMENT 48 YS2-17d06.p1k chr07 878 735 568933 569076 C 144 79.86 1606 ambiguous_trans 38 ALIGNMENT 0 YS2-17d06.p1k chr05 62 390 135613 135612 F 329 0.00 1606 ambiguous_trans_ua 19 ALIGNMENT 631 YS2-17d06.p1k chr02 717 30 29641 30327 C 688 98.26 1606 ambiguous_trans 10 ALIGNMENT 640 YS2-17d06.p1k chr04 717 30 871816 872502 C 688 98.69 1606 ambiguous_trans 4 ALIGNMENT 0 YS2-17d06.p1k chr15 719 930 710025 710024 F 212 0.00 1606 ambiguous_trans 13 ALIGNMENT 51 YS2-17d06.p1k chr04 878 733 651271 651416 C 146 80.14 1606 ambiguous_trans 26 ALIGNMENT 200 YS2-17d06.p1k chr01 396 717 160249 160575 F 322 90.06 1606 ambiguous_trans 22 ALIGNMENT 619 YS2-17d06.p1k chr04 30 717 518957 519643 F 688 97.67 1606 ambiguous_trans 12 ALIGNMENT 31 YS2-17d06.p1k chr04 666 582 992651 992736 C 85 81.18 1606 ambiguous_trans 48 ALIGNMENT 0 YS2-17d06.p1k chr01 734 62 160576 160575 C 673 0.00 1606 ambiguous_trans 44 ALIGNMENT 0 YS2-17d06.p1k chr12 930 718 650827 650826 C 213 0.00 1606 ambiguous_trans 16 ALIGNMENT 0 YS2-17d06.p1k chr07 62 730 811448 811447 F 669 0.00 1606 ambiguous_trans 25 ALIGNMENT 0 YS2-17d06.p1k chr04 734 62 519644 519643 C 673 0.00 1606 ambiguous_trans 34 ALIGNMENT 0 YS2-17d06.p1k chr04 930 879 519501 519500 C 52 0.00 1606 ambiguous_trans 34 ALIGNMENT 42 YS2-17d06.p1k chr03 496 409 84626 84715 C 88 85.23 1606 ambiguous_trans_ua 46 ALIGNMENT 0 YS2-17d06.p1k chr04 879 930 871959 871958 F 52 0.00 1606 ambiguous_trans 49 ALIGNMENT 610 YS2-17d06.p1k chr15 30 718 709337 710025 F 689 97.24 1606 ambiguous_trans 13 ALIGNMENT 51 YS2-17d06.p1k chr05 878 733 135796 135941 C 146 80.14 1606 ambiguous_trans_ua 27 ALIGNMENT 0 YS2-17d06.p1k chr06 457 62 137900 137899 C 396 0.00 1606 ambiguous_trans_ua 47 ALIGNMENT 0 YS2-17d06.p1k chr12 930 879 981554 981553 C 52 0.00 1606 ambiguous_trans 31 ALIGNMENT 0 YS2-17d06.p1k chr04 719 930 651415 651414 F 212 0.00 1606 ambiguous_trans 14 ALIGNMENT 643 YS2-17d06.p1k chr04 724 30 981159 981851 C 695 98.56 1606 ambiguous_trans 1 ALIGNMENT 48 YS2-17d06.p1k chr14 878 735 567850 567993 C 144 79.86 1606 ambiguous_trans_ua 42 ALIGNMENT 0 YS2-17d06.p1k chr05 732 62 135942 135941 C 671 0.00 1606 ambiguous_trans_ua 27 ALIGNMENT 0 YS2-17d06.p1k chr04 930 879 992494 992493 C 52 0.00 1606 ambiguous_trans 48 ALIGNMENT 911 YS2-17d06.q1k chr12 45 1020 730695 731669 F 976 98.36 1425 accept 0 ALIGNMENT 50 YS2-17d06.p1k chr12 878 734 981553 981697 C 145 80.00 1606 ambiguous_trans 31 ALIGNMENT 0 YS2-17d06.p1k chr04 718 771 992637 992636 F 54 0.00 1606 ambiguous_trans 23 ALIGNMENT 0 YS2-17d06.p1k chr12 879 930 941332 941331 F 52 0.00 1606 ambiguous_trans 40 ALIGNMENT 0 YS2-17d06.p1k chr06 930 718 137909 137908 C 213 0.00 1606 ambiguous_trans 8 ALIGNMENT 44 YS2-17d06.p1k chr01 878 734 166020 166164 C 145 78.62 1606 ambiguous_trans 43 ALIGNMENT 0 YS2-17d06.p1k chr04 62 734 981165 981164 F 673 0.00 1606 ambiguous_trans 36 ALIGNMENT 631 YS2-17d06.p1k chr14 32 717 567308 567993 F 686 98.40 1606 ambiguous_trans 11 ALIGNMENT 634 YS2-17d06.p1k chr06 717 30 137908 138594 C 688 98.40 1606 ambiguous_trans 8 ALIGNMENT 63 YS2-17d06.p1k chr04 772 870 992637 992736 F 99 89.90 1606 ambiguous_trans 23 ALIGNMENT 0 YS2-17d06.p1k chr05 719 930 135940 135939 F 212 0.00 1606 ambiguous_trans_ua 19 ALIGNMENT 0 YS2-17d06.p1k chr14 930 879 567851 567850 C 52 0.00 1606 ambiguous_trans_ua 42 ALIGNMENT 415 YS2-17d06.p1k chr04 70 718 650765 651415 F 649 89.06 1606 ambiguous_trans 14 ALIGNMENT 0 YS2-17d06.p1k chr01 62 395 160249 160248 F 334 0.00 1606 ambiguous_trans 22 ALIGNMENT 0 YS2-17d06.p1k chr15 930 720 970281 970280 C 211 0.00 1606 ambiguous_trans 3 ALIGNMENT 0 YS2-17d06.p1k chr15 62 733 970281 970280 F 672 0.00 1606 ambiguous_trans 32 ALIGNMENT 0 YS2-17d08.q1k vc_3 449 62 2513 2512 C 388 0.00 490 reject_low 4 ALIGNMENT 36 YS2-17d08.q1k vc_5 487 452 1 36 C 36 100.00 490 reject_low 8 ALIGNMENT 0 YS2-17d08.q1k vc_5 451 62 37 36 C 390 0.00 490 reject_low 8 ALIGNMENT 38 YS2-17d08.q1k vc_7 453 490 13525 13562 F 38 100.00 490 reject_low 7 ALIGNMENT 0 YS2-17d08.q1k vc_7 62 452 13525 13524 F 391 0.00 490 reject_low 7 ALIGNMENT 0 YS2-17d08.q1k chr16 490 450 374679 374678 C 41 0.00 490 accept_chi 0 ALIGNMENT 0 YS2-17d08.q1k vc_1 449 62 2513 2512 C 388 0.00 490 reject_low 2 ALIGNMENT 41 YS2-17d08.q1k vc_1 490 450 2472 2512 C 41 100.00 490 reject_low 2 ALIGNMENT 41 YS2-17d08.q1k vc_4 450 490 5831 5871 F 41 100.00 490 reject_low 5 ALIGNMENT 0 YS2-17d08.q1k vc_4 62 449 5831 5830 F 388 0.00 490 reject_low 5 ALIGNMENT 41 YS2-17d08.q1k vc_3 490 450 2472 2512 C 41 100.00 490 reject_low 4 ALIGNMENT 392 YS2-17d08.p1k chr16 28 435 374679 375088 F 408 99.51 454 accept_chi 1 ALIGNMENT 39 YS2-17d08.q1k vc_5 490 452 5025 5063 C 39 100.00 490 reject_low 6 ALIGNMENT 399 YS2-17d08.q1k chr16 449 38 374678 375088 C 412 99.76 490 accept_chi 0 ALIGNMENT 0 YS2-17d08.q1k vc_5 451 62 5064 5063 C 390 0.00 490 reject_low 6 ALIGNMENT 0 YS2-17d08.q1k vc_2 449 62 2146 2145 C 388 0.00 490 reject_low 3 ALIGNMENT 41 YS2-17d08.q1k vc_2 490 450 2105 2145 C 41 100.00 490 reject_low 3 ALIGNMENT 0 YS2-17d08.p1k chr16 436 454 375088 375087 F 19 0.00 454 accept_chi 1 ALIGNMENT 41 YS2-17d09.q1k vc_2 312 272 2105 2145 C 41 100.00 312 reject_low 3 ALIGNMENT 0 YS2-17d09.p1k chr12 297 314 680753 680752 F 18 0.00 314 accept_chi 1 ALIGNMENT 0 YS2-17d09.q1k vc_3 271 62 2513 2512 C 210 0.00 312 reject_low 4 ALIGNMENT 0 YS2-17d09.q1k vc_5 273 62 37 36 C 212 0.00 312 reject_low 8 ALIGNMENT 209 YS2-17d09.p1k chr12 65 296 680520 680753 F 232 97.41 314 accept_chi 1 ALIGNMENT 0 YS2-17d09.q1k vc_5 273 62 5064 5063 C 212 0.00 312 reject_low 6 ALIGNMENT 0 YS2-17d09.q1k vc_2 271 62 2146 2145 C 210 0.00 312 reject_low 3 ALIGNMENT 41 YS2-17d09.q1k vc_4 272 312 5831 5871 F 41 100.00 312 reject_low 5 ALIGNMENT 38 YS2-17d09.q1k vc_7 275 312 13525 13562 F 38 100.00 312 reject_low 7 ALIGNMENT 226 YS2-17d09.q1k chr12 272 39 680520 680753 C 234 100.00 312 accept_chi 0 ALIGNMENT 0 YS2-17d09.q1k vc_4 62 271 5831 5830 F 210 0.00 312 reject_low 5 ALIGNMENT 39 YS2-17d09.q1k vc_5 312 274 5025 5063 C 39 100.00 312 reject_low 6 ALIGNMENT 41 YS2-17d09.q1k vc_3 312 272 2472 2512 C 41 100.00 312 reject_low 4 ALIGNMENT 41 YS2-17d09.q1k vc_1 312 272 2472 2512 C 41 100.00 312 reject_low 2 ALIGNMENT 0 YS2-17d09.q1k chr12 312 273 680521 680520 C 40 0.00 312 accept_chi 0 ALIGNMENT 0 YS2-17d09.q1k vc_1 271 62 2513 2512 C 210 0.00 312 reject_low 2 ALIGNMENT 36 YS2-17d09.q1k vc_5 309 274 1 36 C 36 100.00 312 reject_low 8 ALIGNMENT 0 YS2-17d09.q1k vc_7 62 274 13525 13524 F 213 0.00 312 reject_low 7 ALIGNMENT 0 YS2-17d10.p1k chr13 707 689 200306 200305 C 19 0.00 707 manual 0 ALIGNMENT 543 YS2-17d10.q1k chr16 39 665 60425 61051 F 627 97.13 665 reject_low 19 ALIGNMENT 543 YS2-17d10.q1k chr13 39 665 200305 200931 F 627 97.13 665 reject_low 17 ALIGNMENT 538 YS2-17d10.p1k chr05 63 688 444717 445343 F 626 96.96 707 reject_low 38 ALIGNMENT 0 YS2-17d10.p1k chr02 707 689 225011 225010 C 19 0.00 707 reject_low 42 ALIGNMENT 543 YS2-17d10.q1k chr12 665 39 477299 477925 C 627 97.13 665 reject_low 16 ALIGNMENT 544 YS2-17d10.p1k chr04 63 688 879619 880245 F 626 97.28 707 reject_low 33 ALIGNMENT 0 YS2-17d10.p1k chr13 689 707 358949 358948 F 19 0.00 707 reject_low 43 ALIGNMENT 0 YS2-17d10.p1k chr04 707 689 1099737 1099736 C 19 0.00 707 reject_low 24 ALIGNMENT 541 YS2-17d10.p1k chr08 63 688 544929 545555 F 626 97.12 707 reject_low 36 ALIGNMENT 594 YS2-17d10.q1k chr16 39 665 848385 849011 F 627 99.84 665 reject_low 5 ALIGNMENT 589 YS2-17d10.p1k chr16 688 63 848385 849011 C 626 99.68 707 reject_low 27 ALIGNMENT 0 YS2-17d10.p1k chr12 707 689 597118 597117 C 19 0.00 707 reject_low 37 ALIGNMENT 594 YS2-17d10.q1k chr07 665 39 563168 563794 C 627 99.84 665 reject_low 4 ALIGNMENT 0 YS2-17d10.p1k chr07 689 707 563794 563793 F 19 0.00 707 reject_low 25 ALIGNMENT 568 YS2-17d10.q1k chr15 39 663 598789 599413 F 625 98.56 665 reject_low 8 ALIGNMENT 0 YS2-17d10.p1k chr07 689 707 819343 819342 F 19 0.00 707 reject_low 29 ALIGNMENT 546 YS2-17d10.q1k chr12 39 665 597117 597743 F 627 97.29 665 reject_low 13 ALIGNMENT 538 YS2-17d10.p1k chr02 688 71 225010 225627 C 618 97.25 707 reject_low 42 ALIGNMENT 563 YS2-17d10.p1k chr02 688 65 263547 264171 C 624 98.40 707 reject_low 31 ALIGNMENT 0 YS2-17d10.p1k chr10 707 689 476352 476351 C 19 0.00 707 reject_low 46 ALIGNMENT 0 YS2-17d10.p1k chr05 689 707 445343 445342 F 19 0.00 707 reject_low 38 ALIGNMENT 0 YS2-17d10.p1k chr05 689 707 494442 494441 F 19 0.00 707 reject_low 35 ALIGNMENT 0 YS2-17d10.p1k chr16 707 689 848386 848385 C 19 0.00 707 reject_low 27 ALIGNMENT 592 YS2-17d10.q1k chr07 663 39 818719 819343 C 625 99.84 665 reject_low 6 ALIGNMENT 0 YS2-17d10.p1k chr16 707 689 60426 60425 C 19 0.00 707 reject_low 41 ALIGNMENT 589 YS2-17d10.p1k chr04 688 63 1099736 1100362 C 626 99.68 707 reject_low 24 ALIGNMENT 568 YS2-17d10.q1k chr02 39 663 263547 264171 F 625 98.56 665 reject_low 7 ALIGNMENT 0 YS2-17d10.p1k chr04 689 707 647444 647443 F 19 0.00 707 reject_low 23 ALIGNMENT 0 YS2-17d10.p1k chr12 689 707 477925 477924 F 19 0.00 707 reject_low 39 ALIGNMENT 0 YS2-17d10.p1k chr02 707 689 263548 263547 C 19 0.00 707 reject_low 31 ALIGNMENT 538 YS2-17d10.p1k chr15 688 63 121676 122302 C 626 96.96 707 reject_low 40 ALIGNMENT 541 YS2-17d10.p1k chr12 688 63 597117 597743 C 626 97.12 707 reject_low 37 ALIGNMENT 543 YS2-17d10.q1k chr15 39 665 121676 122302 F 627 97.13 665 reject_low 18 ALIGNMENT 538 YS2-17d10.p1k chr16 688 63 60425 61051 C 626 96.96 707 reject_low 41 ALIGNMENT 587 YS2-17d10.p1k chr07 65 688 818719 819343 F 624 99.68 707 reject_low 29 ALIGNMENT 0 YS2-17d10.p1k chr10 707 689 481936 481935 C 19 0.00 707 manual 1 ALIGNMENT 589 YS2-17d10.p1k chr07 63 688 563168 563794 F 626 99.68 707 reject_low 25 ALIGNMENT 594 YS2-17d10.q1k chr04 665 39 646818 647444 C 627 99.84 665 reject_low 2 ALIGNMENT 538 YS2-17d10.p1k chr13 71 688 358332 358949 F 618 97.25 707 reject_low 43 ALIGNMENT 0 YS2-17d10.p1k chr16 689 707 806588 806587 F 19 0.00 707 reject_low 44 ALIGNMENT 563 YS2-17d10.p1k chr15 688 65 598789 599413 C 624 98.40 707 reject_low 32 ALIGNMENT 594 YS2-17d10.q1k chr13 39 665 188138 188764 F 627 99.84 665 manual 0 ALIGNMENT 0 YS2-17d10.p1k chr14 707 689 523117 523116 C 19 0.00 707 reject_low 45 ALIGNMENT 544 YS2-17d10.p1k chr13 63 688 374021 374647 F 626 97.28 707 reject_low 34 ALIGNMENT 0 YS2-17d10.p1k chr04 689 707 880245 880244 F 19 0.00 707 reject_low 33 ALIGNMENT 542 YS2-17d10.q1k chr13 664 39 358324 358949 C 626 97.12 665 reject_low 21 ALIGNMENT 0 YS2-17d10.p1k chr16 689 707 852576 852575 F 19 0.00 707 reject_low 47 ALIGNMENT 589 YS2-17d10.p1k chr04 63 688 646818 647444 F 626 99.68 707 reject_low 23 ALIGNMENT 536 YS2-17d10.q1k chr10 39 664 481935 482560 F 626 96.81 665 reject_low 28 ALIGNMENT 0 YS2-17d10.p1k chr08 689 707 545555 545554 F 19 0.00 707 reject_low 36 ALIGNMENT 0 YS2-17d10.p1k chr15 707 689 121677 121676 C 19 0.00 707 reject_low 40 ALIGNMENT 542 YS2-17d10.q1k chr02 39 664 225010 225635 F 626 97.12 665 reject_low 20 ALIGNMENT 589 YS2-17d10.p1k chr13 688 63 188138 188764 C 626 99.68 707 reject_low 26 ALIGNMENT 540 YS2-17d10.q1k chr16 665 39 805962 806588 C 627 96.97 665 reject_low 22 ALIGNMENT 543 YS2-17d10.q1k chr05 665 39 444717 445343 C 627 97.13 665 reject_low 15 ALIGNMENT 538 YS2-17d10.p1k chr12 63 688 477299 477925 F 626 96.96 707 reject_low 39 ALIGNMENT 541 YS2-17d10.p1k chr05 63 688 493816 494442 F 626 97.12 707 reject_low 35 ALIGNMENT 546 YS2-17d10.q1k chr05 665 39 493816 494442 C 627 97.29 665 reject_low 11 ALIGNMENT 594 YS2-17d10.q1k chr04 39 665 1099736 1100362 F 627 99.84 665 reject_low 3 ALIGNMENT 532 YS2-17d10.p1k chr10 688 71 481935 482552 C 618 96.93 707 manual 1 ALIGNMENT 535 YS2-17d10.p1k chr16 63 688 805962 806588 F 626 96.81 707 reject_low 44 ALIGNMENT 523 YS2-17d10.p1k chr10 688 63 476351 476977 C 626 96.17 707 reject_low 46 ALIGNMENT 528 YS2-17d10.q1k chr10 39 665 476351 476977 F 627 96.33 665 manual 1 ALIGNMENT 523 YS2-17d10.p1k chr16 63 688 851950 852576 F 626 96.17 707 reject_low 47 ALIGNMENT 528 YS2-17d10.q1k chr16 665 39 851950 852576 C 627 96.33 665 reject_low 30 ALIGNMENT 549 YS2-17d10.q1k chr13 665 39 374021 374647 C 627 97.45 665 reject_low 10 ALIGNMENT 538 YS2-17d10.p1k chr13 688 63 200305 200931 C 626 96.96 707 manual 0 ALIGNMENT 0 YS2-17d10.p1k chr13 707 689 188139 188138 C 19 0.00 707 reject_low 26 ALIGNMENT 549 YS2-17d10.q1k chr04 665 39 879619 880245 C 627 97.45 665 reject_low 9 ALIGNMENT 532 YS2-17d10.p1k chr14 688 63 523116 523742 C 626 96.65 707 reject_low 45 ALIGNMENT 546 YS2-17d10.q1k chr08 665 39 544929 545555 C 627 97.29 665 reject_low 12 ALIGNMENT 0 YS2-17d10.p1k chr15 707 689 598790 598789 C 19 0.00 707 reject_low 32 ALIGNMENT 543 YS2-17d10.q1k chr01 665 39 161563 162189 C 627 97.13 665 reject_low 14 ALIGNMENT 0 YS2-17d10.p1k chr13 689 707 374647 374646 F 19 0.00 707 reject_low 34 ALIGNMENT 995 YS2-17d11.q1k chr10 1197 40 679412 680584 C 1158 95.60 1390 accept_chi 0 ALIGNMENT 976 YS2-17d11.p1k chr07 29 1113 762406 763499 F 1085 97.70 1384 accept_chi 1 ALIGNMENT 0 YS2-17d12.q1k vc_3 929 851 2473 2472 C 79 0.00 1431 reject_low 21 ALIGNMENT 0 YS2-17d12.q1k chr15 929 811 297800 297799 C 119 0.00 1431 accept_chi 0 ALIGNMENT 249 YS2-17d12.q1k vc_3 850 1197 2531 2886 F 348 91.38 1431 reject_low 11 ALIGNMENT 249 YS2-17d12.q1k vc_5 850 1197 2398 2753 F 348 91.38 1431 reject_low 2 ALIGNMENT 249 YS2-17d12.q1k vc_7 1197 850 2372 2727 C 348 91.67 1431 reject_low 3 ALIGNMENT 26 YS2-17d12.p1k vc_3 846 816 2441 2472 C 31 96.77 1406 reject_low 18 ALIGNMENT 41 YS2-17d12.q1k vc_3 850 810 2472 2512 C 41 100.00 1431 reject_low 21 ALIGNMENT 38 YS2-17d12.q1k vc_7 813 850 13525 13562 F 38 100.00 1431 reject_low 24 ALIGNMENT 0 YS2-17d12.q1k vc_7 1008 62 6412 6411 C 947 0.00 1431 reject_low 16 ALIGNMENT 0 YS2-17d12.q1k vc_3 62 849 2531 2530 F 788 0.00 1431 reject_low 11 ALIGNMENT 0 YS2-17d12.p1k vc_7 62 815 13562 13561 F 754 0.00 1406 reject_low 8 ALIGNMENT 0 YS2-17d12.q1k vc_4 851 850 5872 6353 F 0 0.00 1431 reject_low 14 ALIGNMENT 0 YS2-17d12.p1k vc_7 62 815 100 99 F 754 0.00 1406 reject_low 3 ALIGNMENT 0 YS2-17d12.q1k vc_7 62 812 13525 13524 F 751 0.00 1431 reject_low 24 ALIGNMENT 0 YS2-17d12.q1k vc_1 62 849 2531 2530 F 788 0.00 1431 reject_low 9 ALIGNMENT 39 YS2-17d12.q1k vc_5 850 812 5025 5063 C 39 100.00 1431 reject_low 22 ALIGNMENT 0 YS2-17d12.q1k vc_7 849 62 2728 2727 C 788 0.00 1431 reject_low 3 ALIGNMENT 0 YS2-17d12.q1k vc_7 62 812 63 62 F 751 0.00 1431 reject_low 23 ALIGNMENT 0 YS2-17d12.q1k vc_2 929 851 2106 2105 C 79 0.00 1431 reject_low 20 ALIGNMENT 74 YS2-17d12.q1k vc_7 1197 1057 5027 5172 C 141 85.11 1431|0,1 reject_low 16 ALIGNMENT 0 YS2-17d12.p1k vc_1 815 62 2106 2105 C 754 0.00 1406 reject_low 4 ALIGNMENT 138 YS2-17d12.q1k vc_4 850 1009 6353 6514 F 160 96.25 1431|1,0 reject_low 14 ALIGNMENT 747 YS2-17d12.q1k chr15 810 39 297799 298570 C 772 100.00 1431 accept_chi 0 ALIGNMENT 38 YS2-17d12.q1k vc_7 813 850 63 100 F 38 100.00 1431 reject_low 23 ALIGNMENT 41 YS2-17d12.q1k vc_4 810 850 5831 5871 F 41 100.00 1431 reject_low 14 ALIGNMENT 0 YS2-17d12.q1k vc_4 849 62 1535 1534 C 788 0.00 1431 reject_low 15 ALIGNMENT 0 YS2-17d12.q1k vc_5 811 62 5064 5063 C 750 0.00 1431 reject_low 22 ALIGNMENT 0 YS2-17d12.q1k vc_5 62 849 2398 2397 F 788 0.00 1431 reject_low 2 ALIGNMENT 249 YS2-17d12.q1k vc_1 850 1197 2531 2886 F 348 91.38 1431 reject_low 9 ALIGNMENT 0 YS2-17d12.p1k vc_1 960 847 2442 2441 C 114 0.00 1406 reject_low 17 ALIGNMENT 41 YS2-17d12.q1k vc_2 850 810 2105 2145 C 41 100.00 1431 reject_low 20 ALIGNMENT 0 YS2-17d12.q1k vc_5 929 851 5026 5025 C 79 0.00 1431 reject_low 22 ALIGNMENT 0 YS2-17d12.q1k vc_5 929 848 2 1 C 82 0.00 1431 reject_low 25 ALIGNMENT 242 YS2-17d12.q1k vc_4 1197 850 5455 5812 C 348 91.09 1431 reject_low 12 ALIGNMENT 233 YS2-17d12.p1k vc_3 1148 816 1753 2105 C 333 91.29 1406 reject_low 6 ALIGNMENT 742 YS2-17d12.p1k chr15 28 798 297799 298570 F 771 99.87 1406 accept_chi 1 ALIGNMENT 0 YS2-17d12.p1k vc_3 960 847 2442 2441 C 114 0.00 1406 reject_low 18 ALIGNMENT 0 YS2-17d12.q1k vc_4 62 849 126 125 F 788 0.00 1431 reject_low 13 ALIGNMENT 233 YS2-17d12.p1k vc_7 816 1148 13562 13914 F 333 91.29 1406 reject_low 8 ALIGNMENT 0 YS2-17d12.q1k vc_7 851 929 13562 13561 F 79 0.00 1431 reject_low 24 ALIGNMENT 249 YS2-17d12.q1k vc_2 850 1197 2164 2519 F 348 91.38 1431 reject_low 10 ALIGNMENT 0 YS2-17d12.q1k vc_2 809 62 2146 2145 C 748 0.00 1431 reject_low 20 ALIGNMENT 0 YS2-17d12.q1k vc_4 62 809 5831 5830 F 748 0.00 1431 reject_low 14 ALIGNMENT 0 YS2-17d12.p1k vc_3 815 62 2473 2472 C 754 0.00 1406 reject_low 18 ALIGNMENT 36 YS2-17d12.q1k vc_5 847 812 1 36 C 36 100.00 1431 reject_low 25 ALIGNMENT 233 YS2-17d12.p1k vc_1 1148 816 1753 2105 C 333 91.29 1406 reject_low 4 ALIGNMENT 0 YS2-17d12.q1k vc_1 809 62 2513 2512 C 748 0.00 1431 reject_low 19 ALIGNMENT 41 YS2-17d12.q1k vc_1 850 810 2472 2512 C 41 100.00 1431 reject_low 19 ALIGNMENT 41 YS2-17d12.q1k vc_7 1058 1009 6360 6411 C 50 96.00 1431|1,0 reject_low 16 ALIGNMENT 0 YS2-17d12.q1k vc_4 849 62 5813 5812 C 788 0.00 1431 reject_low 12 ALIGNMENT 0 YS2-17d12.q1k vc_7 1057 1058 5172 6360 C 0 0.00 1431 reject_low 16 ALIGNMENT 26 YS2-17d12.p1k vc_1 846 816 2441 2472 C 31 96.77 1406 reject_low 17 ALIGNMENT 0 YS2-17d12.p1k vc_1 815 62 2473 2472 C 754 0.00 1406 reject_low 17 ALIGNMENT 233 YS2-17d12.p1k vc_5 1148 816 4673 5025 C 333 91.29 1406 reject_low 2 ALIGNMENT 0 YS2-17d12.p1k chr15 799 960 298570 298569 F 162 0.00 1406 accept_chi 1 ALIGNMENT 0 YS2-17d12.q1k vc_1 929 851 2473 2472 C 79 0.00 1431 reject_low 19 ALIGNMENT 0 YS2-17d12.q1k vc_3 809 62 2513 2512 C 748 0.00 1431 reject_low 21 ALIGNMENT 0 YS2-17d12.p1k vc_2 815 62 2106 2105 C 754 0.00 1406 reject_low 5 ALIGNMENT 0 YS2-17d12.q1k vc_5 811 62 37 36 C 750 0.00 1431 reject_low 25 ALIGNMENT 233 YS2-17d12.p1k vc_4 816 1148 5871 6223 F 333 91.29 1406 reject_low 7 ALIGNMENT 0 YS2-17d12.p1k vc_4 62 815 5871 5870 F 754 0.00 1406 reject_low 7 ALIGNMENT 233 YS2-17d12.p1k vc_7 816 1148 100 452 F 333 91.29 1406 reject_low 3 ALIGNMENT 138 YS2-17d12.q1k vc_4 850 1009 126 287 F 160 96.25 1431 reject_low 13 ALIGNMENT 0 YS2-17d12.q1k vc_7 851 929 100 99 F 79 0.00 1431 reject_low 23 ALIGNMENT 0 YS2-17d12.q1k vc_2 62 849 2164 2163 F 788 0.00 1431 reject_low 10 ALIGNMENT 0 YS2-17d12.p1k vc_3 815 62 2106 2105 C 754 0.00 1406 reject_low 6 ALIGNMENT 0 YS2-17d12.p1k vc_5 815 62 5026 5025 C 754 0.00 1406 reject_low 2 ALIGNMENT 233 YS2-17d12.p1k vc_2 1148 816 1753 2105 C 333 91.29 1406 reject_low 5 ALIGNMENT 82 YS2-17d12.q1k vc_4 937 850 1446 1534 C 88 98.86 1431 reject_low 15 ALIGNMENT 1058 YS2-17d13.q1k chr03 1190 38 249029 250194 C 1153 97.75 1385 accept 0 ALIGNMENT 974 YS2-17d13.p1k chr03 63 1181 244709 245835 F 1119 96.69 1390 accept 0 ALIGNMENT 0 YS2-17d14.q1k vc_4 62 209 5831 5830 F 148 0.00 250 reject_low 5 ALIGNMENT 38 YS2-17d14.q1k vc_7 213 250 13525 13562 F 38 100.00 250 reject_low 8 ALIGNMENT 41 YS2-17d14.q1k vc_4 210 250 5831 5871 F 41 100.00 250 reject_low 5 ALIGNMENT 41 YS2-17d14.q1k vc_1 250 210 2472 2512 C 41 100.00 250 reject_low 2 ALIGNMENT 38 YS2-17d14.q1k vc_7 213 250 63 100 F 38 100.00 250 reject_low 7 ALIGNMENT 0 YS2-17d14.q1k vc_7 62 212 13525 13524 F 151 0.00 250 reject_low 8 ALIGNMENT 41 YS2-17d14.q1k vc_3 250 210 2472 2512 C 41 100.00 250 reject_low 4 ALIGNMENT 0 YS2-17d14.q1k vc_5 211 62 5064 5063 C 150 0.00 250 reject_low 6 ALIGNMENT 0 YS2-17d14.q1k vc_2 209 62 2146 2145 C 148 0.00 250 reject_low 3 ALIGNMENT 0 YS2-17d14.q1k chr16 250 210 588732 588731 C 41 0.00 250 accept_chi 0 ALIGNMENT 0 YS2-17d14.q1k vc_1 209 62 2513 2512 C 148 0.00 250 reject_low 2 ALIGNMENT 156 YS2-17d14.q1k chr16 209 38 588731 588902 C 172 97.67 250 accept_chi 0 ALIGNMENT 0 YS2-17d14.p1k chr16 261 278 588902 588901 F 18 0.00 278 accept_chi 1 ALIGNMENT 39 YS2-17d14.q1k vc_5 250 212 5025 5063 C 39 100.00 250 reject_low 6 ALIGNMENT 119 YS2-17d14.p1k chr16 82 260 588731 588902 F 179 92.74 278 accept_chi 1 ALIGNMENT 0 YS2-17d14.q1k vc_5 211 62 37 36 C 150 0.00 250 reject_low 9 ALIGNMENT 0 YS2-17d14.q1k vc_3 209 62 2513 2512 C 148 0.00 250 reject_low 4 ALIGNMENT 41 YS2-17d14.q1k vc_2 250 210 2105 2145 C 41 100.00 250 reject_low 3 ALIGNMENT 36 YS2-17d14.q1k vc_5 247 212 1 36 C 36 100.00 250 reject_low 9 ALIGNMENT 0 YS2-17d14.q1k vc_7 62 212 63 62 F 151 0.00 250 reject_low 7 ALIGNMENT 925 YS2-17d16.p1k chr13 33 1062 291962 293002 F 1030 97.38 1344 accept_chi 1 ALIGNMENT 1013 YS2-17d16.q1k chr02 1157 41 711668 712798 C 1117 97.85 1375 accept_chi 0 ALIGNMENT 38 YS2-17d17.q1k vc_7 296 333 13525 13562 F 38 100.00 333 reject_low 6 ALIGNMENT 39 YS2-17d17.q1k vc_5 333 295 5025 5063 C 39 100.00 333 reject_low 5 ALIGNMENT 41 YS2-17d17.q1k vc_4 293 333 5831 5871 F 41 100.00 333 reject_low 4 ALIGNMENT 41 YS2-17d17.q1k vc_3 333 293 2472 2512 C 41 100.00 333 reject_low 3 ALIGNMENT 0 YS2-17d17.q1k vc_5 294 62 5064 5063 C 233 0.00 333 reject_low 5 ALIGNMENT 0 YS2-17d17.q1k vc_4 62 292 5831 5830 F 231 0.00 333 reject_low 4 ALIGNMENT 0 YS2-17d17.q1k chr04 293 333 1130341 1130340 F 41 0.00 333 accept_chi 0 ALIGNMENT 246 YS2-17d17.q1k chr04 37 292 1130086 1130341 F 256 99.61 333 accept_chi 0 ALIGNMENT 0 YS2-17d17.q1k vc_5 294 62 37 36 C 233 0.00 333 reject_low 7 ALIGNMENT 0 YS2-17d17.p1k chr04 341 323 1130087 1130086 C 19 0.00 341 accept_chi 1 ALIGNMENT 36 YS2-17d17.q1k vc_5 330 295 1 36 C 36 100.00 333 reject_low 7 ALIGNMENT 0 YS2-17d17.q1k vc_3 292 62 2513 2512 C 231 0.00 333 reject_low 3 ALIGNMENT 0 YS2-17d17.q1k vc_7 62 295 13525 13524 F 234 0.00 333 reject_low 6 ALIGNMENT 243 YS2-17d17.p1k chr04 322 67 1130086 1130341 C 256 99.22 341 accept_chi 1 ALIGNMENT 41 YS2-17d17.q1k vc_1 333 293 2472 2512 C 41 100.00 333 reject_low 2 ALIGNMENT 0 YS2-17d17.q1k vc_1 292 62 2513 2512 C 231 0.00 333 reject_low 2 ALIGNMENT 40 YS2-17d18.q1k vc_3 449 410 2472 2511 C 40 100.00 449 reject_low 3 ALIGNMENT 0 YS2-17d18.q1k vc_1 409 62 2512 2511 C 348 0.00 449 reject_low 2 ALIGNMENT 0 YS2-17d18.q1k vc_5 410 62 5064 5063 C 349 0.00 449 reject_low 5 ALIGNMENT 0 YS2-17d18.p1k chr02 461 444 14284 14283 C 18 0.00 461 ambiguous_tel 1 ALIGNMENT 376 YS2-17d18.q1k chr02 30 409 14283 14662 F 380 100.00 449 ambiguous_tel 0 ALIGNMENT 365 YS2-17d18.p1k chr02 443 65 14283 14662 C 379 99.21 461 ambiguous_tel 1 ALIGNMENT 0 YS2-17d18.q1k chr02 410 449 14662 14661 F 40 0.00 449 ambiguous_tel 0 ALIGNMENT 0 YS2-17d18.q1k vc_5 410 62 37 36 C 349 0.00 449 reject_low 7 ALIGNMENT 38 YS2-17d18.q1k vc_7 412 449 13525 13562 F 38 100.00 449 reject_low 6 ALIGNMENT 36 YS2-17d18.q1k vc_5 446 411 1 36 C 36 100.00 449 reject_low 7 ALIGNMENT 0 YS2-17d18.q1k vc_3 409 62 2512 2511 C 348 0.00 449 reject_low 3 ALIGNMENT 0 YS2-17d18.q1k vc_7 62 411 13525 13524 F 350 0.00 449 reject_low 6 ALIGNMENT 40 YS2-17d18.q1k vc_1 449 410 2472 2511 C 40 100.00 449 reject_low 2 ALIGNMENT 0 YS2-17d18.q1k vc_4 62 409 5832 5831 F 348 0.00 449 reject_low 4 ALIGNMENT 40 YS2-17d18.q1k vc_4 410 449 5832 5871 F 40 100.00 449 reject_low 4 ALIGNMENT 39 YS2-17d18.q1k vc_5 449 411 5025 5063 C 39 100.00 449 reject_low 5 ALIGNMENT 22 YS2-17d20.q1k scplasm1 321 357 720 756 F 37 86.49 1344 reject_low 5 ALIGNMENT 0 YS2-17d20.q1k vc_6 552 62 6536 6535 C 491 0.00 1344 reject_low 3 ALIGNMENT 0 YS2-17d20.p1k scplasm1 62 892 3714 3713 F 831 0.00 1393 reject_low 4 ALIGNMENT 419 YS2-17d20.q1k vc_6 1116 553 5968 6535 C 564 93.09 1344 reject_low 3 ALIGNMENT 0 YS2-17d20.q1k scplasm1 62 320 720 719 F 259 0.00 1344 reject_low 5 ALIGNMENT 811 YS2-17d20.p1k scplasm1 1265 31 555 1808 C 1235 89.80 1393 accept_chi 0 ALIGNMENT 0 YS2-17d20.q1k scplasm1 737 760 4312 4311 F 24 0.00 1344 manual 2 ALIGNMENT 163 YS2-17d20.p1k scplasm1 893 1265 3714 4098 F 373 83.91 1393 reject_low 4 ALIGNMENT 22 YS2-17d20.q1k scplasm1 357 321 3897 3933 C 37 86.49 1344 reject_low 4 ALIGNMENT 0 YS2-17d20.q1k scplasm1 358 760 756 755 F 403 0.00 1344 reject_low 5 ALIGNMENT 541 YS2-17d20.q1k scplasm1 38 736 3610 4312 F 699 93.71 1344 manual 2 ALIGNMENT 0 YS2-17d20.q1k scplasm1 760 358 3898 3897 C 403 0.00 1344 reject_low 4 ALIGNMENT 0 YS2-17d20.q1k scplasm1 320 62 3934 3933 C 259 0.00 1344 reject_low 4 ALIGNMENT 778 YS2-17d20.q1k scplasm1 1059 140 19 936 C 920 95.87 1344 manual 1 ALIGNMENT 0 YS2-17d20.q1k scplasm1 139 62 937 936 C 78 0.00 1344 manual 1 ALIGNMENT 65 YS2-17d21.q1k vc_4 304 238 46 112 C 67 100.00 750 reject_low 13 ALIGNMENT 473 YS2-17d21.q1k vc_7 658 1 1916 2569 C 658 91.64 750 reject_vc 1 ALIGNMENT 302 YS2-17d21.q1k vc_1 1 303 2689 2991 F 303 100.00 750 reject_low 8 ALIGNMENT 0 YS2-17d21.q1k vc_4 62 237 1548 1547 F 176 0.00 750 reject_low 11 ALIGNMENT 163 YS2-17d21.q1k vc_4 308 658 1879 2225 F 351 84.33 750 reject_low 11 ALIGNMENT 0 YS2-17d21.q1k vc_7 304 304 4700 4921 C 1 0.00 750 reject_low 12 ALIGNMENT 65 YS2-17d21.q1k vc_4 238 304 1548 1614 F 67 100.00 750 reject_low 11 ALIGNMENT 51 YS2-17d21.q1k vc_7 54 3 6360 6411 C 52 100.00 750|1,0 reject_low 12 ALIGNMENT 302 YS2-17d21.p1k vc_5 469 1 4189 4669 C 469 89.98 554 reject_vc 0 ALIGNMENT 473 YS2-17d21.q1k vc_5 1 658 2556 3209 F 658 91.64 750 reject_vc 0 ALIGNMENT 296 YS2-17d21.p1k vc_7 1 469 456 936 F 469 89.55 554 reject_vc 1 ALIGNMENT 296 YS2-17d21.p1k vc_7 1 469 13918 14398 F 469 89.55 554 reject_low 6 ALIGNMENT 302 YS2-17d21.q1k vc_2 1 303 2322 2624 F 303 100.00 750 reject_low 9 ALIGNMENT 302 YS2-17d21.p1k vc_6 1 469 3712 4192 F 469 89.98 554 reject_low 5 ALIGNMENT 389 YS2-17d21.q1k vc_4 421 1 5232 5654 C 421 97.62 750 reject_low 7 ALIGNMENT 0 YS2-17d21.q1k vc_4 237 62 113 112 C 176 0.00 750 reject_low 13 ALIGNMENT 302 YS2-17d21.p1k vc_2 469 1 1269 1749 C 469 89.98 554 reject_low 3 ALIGNMENT 302 YS2-17d21.q1k vc_3 1 303 2689 2991 F 303 100.00 750 reject_low 10 ALIGNMENT 302 YS2-17d21.p1k vc_1 469 1 1269 1749 C 469 89.98 554 reject_low 2 ALIGNMENT 0 YS2-17d21.q1k vc_7 53 54 5172 6360 C 0 0.00 750 reject_low 12 ALIGNMENT 302 YS2-17d21.p1k vc_3 469 1 1269 1749 C 469 89.98 554 reject_low 4 ALIGNMENT 247 YS2-17d21.q1k vc_7 303 53 4922 5172 C 251 99.60 750|0,1 reject_low 12 ALIGNMENT 65 YS2-17d21.q1k vc_4 304 238 6273 6339 C 67 100.00 750 reject_low 14 ALIGNMENT 91 YS2-17d21.q1k vc_7 421 305 4583 4699 C 117 93.16 750 reject_low 12 ALIGNMENT 0 YS2-17d21.q1k vc_4 305 307 1615 1878 F 3 0.00 750 reject_low 11 ALIGNMENT 0 YS2-17d21.q1k vc_4 237 62 6340 6339 C 176 0.00 750 reject_low 14 ALIGNMENT 1002 YS2-17d22.p1k chr16 29 1182 150172 151333 F 1154 96.62 1337 accept 0 ALIGNMENT 980 YS2-17d22.q1k chr16 1161 40 153123 154262 C 1122 97.42 1301 accept 0 ALIGNMENT 935 YS2-17d23.q1k chr16 1181 38 461459 462617 C 1144 95.89 1302 accept 0 ALIGNMENT 948 YS2-17d23.p1k chr16 30 1134 457226 458345 F 1105 96.38 1246 accept 0 ALIGNMENT 0 YS2-17e01.p1k chr11 385 197 144771 144770 C 189 0.00 574 reject_low 14 ALIGNMENT 0 YS2-17e01.p1k chr11 574 557 144817 144816 C 18 0.00 574 reject_low 13 ALIGNMENT 0 YS2-17e01.p1k chr10 375 174 121089 121367 C 202 0.00 574 reject_low 20 ALIGNMENT 50 YS2-17e01.p1k chr10 540 377 121032 121201 C 164 77.44 574 reject_low 19 ALIGNMENT 64 YS2-17e01.q1k vc_7 417 299 4583 4699 C 119 86.55 638 reject_vc 7 ALIGNMENT 0 YS2-17e01.p1k chr11 574 529 144683 144682 C 46 0.00 574 reject_low 12 ALIGNMENT 332 YS2-17e01.q1k vc_5 1 504 2556 3058 F 504 90.28 638 reject_vc 1 ALIGNMENT 48 YS2-17e01.p1k chr10 528 376 120930 121088 C 153 77.78 574 reject_low 20 ALIGNMENT 0 YS2-17e01.p1k chr10 269 174 121258 121367 C 96 0.00 574 reject_low 11 ALIGNMENT 56 YS2-17e01.p1k chr10 556 270 120956 121257 C 287 73.87 574 reject_low 11 ALIGNMENT 0 YS2-17e01.q1k vc_7 53 54 5172 6360 C 0 0.00 638 reject_vc 7 ALIGNMENT 33 YS2-17e01.p1k chr11 556 449 144870 144977 C 108 76.85 574 reject_low 17 ALIGNMENT 444 YS2-17e01.p1k chr11 556 56 144762 145261 C 501 96.61 574 accept 0 ALIGNMENT 125 YS2-17e01.p1k chr11 556 386 144708 144878 C 171 91.23 574 reject_low 10 ALIGNMENT 48 YS2-17e01.p1k chr10 173 64 121368 121476 C 110 81.82 574 reject_low 11,19,20 ALIGNMENT 53 YS2-17e01.p1k chr11 474 386 144682 144770 C 89 86.52 574 reject_low 14 ALIGNMENT 244 YS2-17e01.q1k vc_3 1 296 2689 2990 F 296 94.93 638 reject_vc 6 ALIGNMENT 302 YS2-17e01.q1k vc_4 417 1 5232 5654 C 417 91.85 638 reject_vc 3 ALIGNMENT 39 YS2-17e01.p1k chr10 474 386 120930 121021 C 89 82.02 574 reject_low 15 ALIGNMENT 72 YS2-17e01.p1k chr11 64 170 141930 142035 F 107 89.72 574 reject_low 9 ALIGNMENT 0 YS2-17e01.p1k chr10 574 557 121071 121070 C 18 0.00 574 reject_low 16 ALIGNMENT 0 YS2-17e01.p1k chr11 448 197 144978 144977 C 252 0.00 574 reject_low 17 ALIGNMENT 0 YS2-17e01.p1k chr11 385 197 144825 144824 C 189 0.00 574 reject_low 12 ALIGNMENT 0 YS2-17e01.p1k chr11 385 197 144879 144878 C 189 0.00 574 reject_low 10 ALIGNMENT 244 YS2-17e01.q1k vc_2 1 296 2322 2623 F 296 94.93 638 reject_vc 5 ALIGNMENT 0 YS2-17e01.p1k chr10 574 529 120931 120930 C 46 0.00 574 reject_low 20 ALIGNMENT 0 YS2-17e01.p1k chr10 574 475 120931 120930 C 100 0.00 574 reject_low 15 ALIGNMENT 0 YS2-17e01.q1k vc_7 298 297 4700 4922 C 2 0.00 638 reject_vc 7 ALIGNMENT 0 YS2-17e01.p1k chr10 385 197 121022 121021 C 189 0.00 574 reject_low 15 ALIGNMENT 0 YS2-17e01.p1k chr10 574 557 120957 120956 C 18 0.00 574 reject_low 11 ALIGNMENT 29 YS2-17e01.p1k chr10 534 491 121152 121195 C 44 88.64 574 reject_low 18 ALIGNMENT 84 YS2-17e01.q1k vc_4 302 504 1879 2074 F 203 83.74 638 reject_vc 8 ALIGNMENT 0 YS2-17e01.p1k chr10 574 535 121153 121152 C 40 0.00 574 reject_low 18 ALIGNMENT 0 YS2-17e01.p1k chr11 574 557 144709 144708 C 18 0.00 574 reject_low 10 ALIGNMENT 0 YS2-17e01.p1k chr11 574 557 144871 144870 C 18 0.00 574 reject_low 17 ALIGNMENT 51 YS2-17e01.q1k vc_7 54 3 6360 6411 C 52 100.00 638|1,0 reject_vc 7 ALIGNMENT 332 YS2-17e01.q1k vc_7 504 1 2067 2569 C 504 90.08 638 reject_vc 2 ALIGNMENT 0 YS2-17e01.p1k chr10 436 197 121196 121195 C 240 0.00 574 reject_low 16 ALIGNMENT 78 YS2-17e01.p1k chr11 556 440 144816 144932 C 117 88.89 574 reject_low 13 ALIGNMENT 0 YS2-17e01.p1k chr10 376 174 121202 121367 C 203 0.00 574 reject_low 19 ALIGNMENT 244 YS2-17e01.q1k vc_1 1 296 2689 2990 F 296 94.93 638 reject_vc 4 ALIGNMENT 0 YS2-17e01.p1k chr10 574 541 121033 121032 C 34 0.00 574 reject_low 19 ALIGNMENT 0 YS2-17e01.p1k chr11 439 197 144933 144932 C 243 0.00 574 reject_low 13 ALIGNMENT 0 YS2-17e01.p1k chr11 574 475 144683 144682 C 100 0.00 574 reject_low 14 ALIGNMENT 0 YS2-17e01.p1k chr11 574 557 144763 144762 C 18 0.00 574 accept 0 ALIGNMENT 37 YS2-17e01.p1k chr10 556 437 121070 121195 C 120 77.50 574 reject_low 16 ALIGNMENT 189 YS2-17e01.q1k vc_7 296 53 4923 5172 C 244 93.44 638|0,1 reject_vc 7 ALIGNMENT 0 YS2-17e01.p1k chr10 490 197 121196 121195 C 294 0.00 574 reject_low 18 ALIGNMENT 0 YS2-17e01.p1k chr11 171 574 142035 142034 F 404 0.00 574 reject_low 9 ALIGNMENT 98 YS2-17e01.p1k chr11 528 386 144682 144824 C 143 89.51 574 reject_low 12 ALIGNMENT 34 YS2-17e02.p1k chrm 124 73 3049 3101 C 52 90.38 1451 reject_low 16 ALIGNMENT 42 YS2-17e02.q1k chrm 572 525 12267 12314 C 48 97.92 1399 reject_low 21 ALIGNMENT 234 YS2-17e02.q1k chrm 41 383 82512 82857 F 343 96.21 1399|0,3 accept 0 ALIGNMENT 48 YS2-17e02.q1k chrm 572 523 71212 71261 C 50 100.00 1399 reject_low 6 ALIGNMENT 28 YS2-17e02.q1k chrm 602 826 82633 82857 F 225 80.00 1399 reject_low 4 ALIGNMENT 254 YS2-17e02.p1k chrm 1014 529 83420 83904 C 486 93.00 1451|0,2 accept 0 ALIGNMENT 38 YS2-17e02.q1k chrm 123 48 3655 3729 C 76 86.84 1399 reject_low 9 ALIGNMENT 343 YS2-17e02.q1k chrm 377 818 82902 83349 F 442 97.96 1399|4,0 accept 0 ALIGNMENT 50 YS2-17e02.q1k chrm 523 627 50105 50209 F 105 86.67 1399 reject_low 7 ALIGNMENT 0 YS2-17e02.q1k chrm 522 236 2800 12395 C 287 0.00 1399 reject_low 20 ALIGNMENT 36 YS2-17e02.p1k chrm 127 73 2083 2136 C 55 90.91 1451 reject_low 14 ALIGNMENT 0 YS2-17e02.p1k chrm 852 823 32421 32420 C 30 0.00 1451 reject_low 1 ALIGNMENT 45 YS2-17e02.p1k chrm 122 67 76587 76642 C 56 94.64 1451 reject_low 13 ALIGNMENT 114 YS2-17e02.q1k chrm 820 1215 83414 83818 F 396 85.61 1399 accept 0 ALIGNMENT 45 YS2-17e02.p1k chrm 67 122 9484 9539 F 56 94.64 1451 reject_low 15 ALIGNMENT 0 YS2-17e02.q1k chrm 524 236 12315 12395 C 289 0.00 1399 reject_low 21 ALIGNMENT 0 YS2-17e02.q1k chrm 632 814 3160 3159 F 183 0.00 1399 reject_low 2,5 ALIGNMENT 0 YS2-17e02.q1k chrm 814 573 12268 12267 C 242 0.00 1399 reject_low 21 ALIGNMENT 32 YS2-17e02.q1k chrm 493 418 54265 54342 C 76 88.16 1399 reject_low 19 ALIGNMENT 49 YS2-17e02.p1k chrm 151 67 8200 8283 C 85 88.24 1451 reject_low 2 ALIGNMENT 0 YS2-17e02.p1k chrm 123 852 9539 9538 F 730 0.00 1451 reject_low 15 ALIGNMENT 0 YS2-17e02.p1k chrm 852 136 9013 9012 C 717 0.00 1451 reject_low 5 ALIGNMENT 37 YS2-17e02.p1k chrm 822 680 32420 32557 C 143 84.62 1451 reject_low 1 ALIGNMENT 129 YS2-17e02.p1k chrm 314 65 84271 84537 C 250 89.20 1451|1,0 accept 0 ALIGNMENT 0 YS2-17e02.q1k chrm 528 494 52374 54264 C 35 0.00 1399 reject_low 19 ALIGNMENT 0 YS2-17e02.q1k chrm 62 528 3060 3059 F 467 0.00 1399 reject_low 2,5 ALIGNMENT 0 YS2-17e02.q1k chrm 62 286 83256 83255 F 225 0.00 1399 reject_low 3 ALIGNMENT 42 YS2-17e02.q1k chrm 235 48 12396 12589 C 188 85.11 1399 reject_low 15,18,20,21 ALIGNMENT 0 YS2-17e02.p1k chrm 679 77 32558 32557 C 603 0.00 1451 reject_low 1 ALIGNMENT 50 YS2-17e02.q1k chrm 572 518 9488 9543 C 55 98.18 1399 reject_low 15,18 ALIGNMENT 0 YS2-17e02.q1k chrm 522 62 71262 71261 C 461 0.00 1399 reject_low 6 ALIGNMENT 0 YS2-17e02.q1k chrm 819 819 83350 83413 F 1 0.00 1399 accept 0 ALIGNMENT 0 YS2-17e02.p1k chrm 121 852 33495 33494 F 732 0.00 1451 reject_low 17 ALIGNMENT 0 YS2-17e02.p1k chrm 852 125 3050 3049 C 728 0.00 1451 reject_low 16 ALIGNMENT 0 YS2-17e02.q1k chrm 814 339 3808 3807 C 476 0.00 1399 reject_low 8 ALIGNMENT 41 YS2-17e02.p1k chrm 135 71 9012 9075 C 65 89.23 1451 reject_low 5 ALIGNMENT 0 YS2-17e02.p1k chrm 123 852 2801 2800 F 730 0.00 1451 reject_low 18 ALIGNMENT 0 YS2-17e02.p1k chrm 530 531 83903 83961 C 0 0.00 1451 accept 0 ALIGNMENT 48 YS2-17e02.q1k chrm 572 523 2750 2799 C 50 100.00 1399 reject_low 20 ALIGNMENT 32 YS2-17e02.p1k chrm 73 120 33449 33495 F 48 91.67 1451 reject_low 17 ALIGNMENT 0 YS2-17e02.p1k chrm 313 314 84177 84271 C 0 0.00 1451 accept 0 ALIGNMENT 0 YS2-17e02.p1k chrm 852 122 65766 65765 C 731 0.00 1451 reject_low 10 ALIGNMENT 0 YS2-17e02.q1k chrm 814 573 2751 2750 C 242 0.00 1399 reject_low 20 ALIGNMENT 0 YS2-17e02.q1k chrm 814 124 3656 3655 C 691 0.00 1399 reject_low 9 ALIGNMENT 0 YS2-17e02.q1k chrm 62 528 52772 52771 F 467 0.00 1399 reject_low 10 ALIGNMENT 0 YS2-17e02.q1k chrm 199 814 83757 83756 F 616 0.00 1399 reject_low 11 ALIGNMENT 0 YS2-17e02.q1k chrm 417 62 54343 54342 C 356 0.00 1399 reject_low 19 ALIGNMENT 25 YS2-17e02.q1k chrm 338 48 3807 4093 C 291 82.47 1399 reject_low 8 ALIGNMENT 23 YS2-17e02.q1k chrm 43 198 83601 83757 F 156 80.77 1399 reject_low 11 ALIGNMENT 0 YS2-17e02.q1k chrm 62 601 82633 82632 F 540 0.00 1399 reject_low 4 ALIGNMENT 37 YS2-17e02.q1k chrm 529 631 3060 3160 F 103 83.50 1399 reject_low 2,5 ALIGNMENT 41 YS2-17e02.p1k chrm 70 122 2749 2801 F 53 94.34 1451 reject_low 18 ALIGNMENT 0 YS2-17e02.q1k chrm 628 814 50209 50208 F 187 0.00 1399 reject_low 7 ALIGNMENT 36 YS2-17e02.q1k chrm 529 572 52772 52815 F 44 97.73 1399 reject_low 10 ALIGNMENT 0 YS2-17e02.q1k chrm 814 573 71213 71212 C 242 0.00 1399 reject_low 6 ALIGNMENT 0 YS2-17e02.p1k chrm 852 128 2084 2083 C 725 0.00 1451 reject_low 14 ALIGNMENT 0 YS2-17e02.q1k chrm 381 380 82855 82905 F 0 0.00 1399 accept 0 ALIGNMENT 0 YS2-17e02.p1k chrm 852 134 80484 80483 C 719 0.00 1451 reject_low 12 ALIGNMENT 0 YS2-17e02.q1k chrm 573 814 52815 52814 F 242 0.00 1399 reject_low 10 ALIGNMENT 41 YS2-17e02.q1k chrm 287 375 83256 83349 F 89 84.27 1399 reject_low 3 ALIGNMENT 134 YS2-17e02.p1k chrm 532 312 83960 84178 C 221 96.83 1451|2,2 accept 0 ALIGNMENT 0 YS2-17e02.q1k chrm 62 522 50105 50104 F 461 0.00 1399 reject_low 7 ALIGNMENT 0 YS2-17e02.q1k chrm 814 576 52328 52327 C 239 0.00 1399 reject_low 19 ALIGNMENT 0 YS2-17e02.q1k chrm 376 814 83349 83348 F 439 0.00 1399 reject_low 3 ALIGNMENT 0 YS2-17e02.p1k chrm 852 152 8201 8200 C 701 0.00 1451 reject_low 2 ALIGNMENT 0 YS2-17e02.q1k chrm 814 573 9489 9488 C 242 0.00 1399 reject_low 15,18 ALIGNMENT 32 YS2-17e02.p1k chrm 121 73 65765 65813 C 49 89.80 1451 reject_low 10 ALIGNMENT 44 YS2-17e02.p1k chrm 133 67 80483 80550 C 67 89.55 1451 reject_low 12 ALIGNMENT 48 YS2-17e02.p1k chrm 66 134 71207 71274 F 69 91.30 1451 reject_low 6 ALIGNMENT 0 YS2-17e02.p1k chrm 135 852 71274 71273 F 718 0.00 1451 reject_low 6 ALIGNMENT 43 YS2-17e02.q1k chrm 575 529 52327 52373 C 47 100.00 1399 reject_low 19 ALIGNMENT 0 YS2-17e02.p1k chrm 852 123 76588 76587 C 730 0.00 1451 reject_low 13 ALIGNMENT 0 YS2-17e02.q1k chrm 517 236 9544 12395 C 282 0.00 1399 reject_low 15,18 ALIGNMENT 0 YS2-17e03.q1k chr12 148 62 468931 468930 C 87 0.00 482 accept 0 ALIGNMENT 41 YS2-17e03.q1k vc_1 482 442 2472 2512 C 41 100.00 482 reject_low 8 ALIGNMENT 0 YS2-17e03.q1k chr12 133 62 489482 489481 C 72 0.00 482 reject_low 3 ALIGNMENT 41 YS2-17e03.q1k vc_3 482 442 2472 2512 C 41 100.00 482 reject_low 10 ALIGNMENT 351 YS2-17e03.q1k chr12 441 39 459501 459912 C 403 96.77 482 reject_low 1 ALIGNMENT 119 YS2-17e03.p1k chr12 212 330 485696 485814 F 119 100.00 459 reject_low 6 ALIGNMENT 0 YS2-17e03.p1k chr12 62 211 485696 485695 F 150 0.00 459 reject_low 6 ALIGNMENT 119 YS2-17e03.p1k chr12 212 330 482044 482162 F 119 100.00 459 reject_low 3 ALIGNMENT 0 YS2-17e03.p1k chr12 331 459 482162 482161 F 129 0.00 459 reject_low 3 ALIGNMENT 128 YS2-17e03.q1k chr12 267 134 489348 489481 C 134 98.51 482 reject_low 3 ALIGNMENT 285 YS2-17e03.q1k chr12 441 149 468638 468930 C 293 99.66 482 accept 0 ALIGNMENT 128 YS2-17e03.p1k chr12 212 345 489348 489481 F 134 98.51 459 reject_low 5 ALIGNMENT 0 YS2-17e03.p1k chr12 331 459 468930 468929 F 129 0.00 459 reject_low 2 ALIGNMENT 0 YS2-17e03.p1k chr12 441 459 459912 459911 F 19 0.00 459 accept 0 ALIGNMENT 0 YS2-17e03.p1k chr12 331 459 472582 472581 F 129 0.00 459 reject_low 4 ALIGNMENT 0 YS2-17e03.q1k chr12 482 268 485697 485696 C 215 0.00 482 reject_low 7 ALIGNMENT 0 YS2-17e03.q1k chr12 482 268 472465 472464 C 215 0.00 482 reject_low 2 ALIGNMENT 119 YS2-17e03.q1k chr12 267 149 485696 485814 C 119 100.00 482 reject_low 7 ALIGNMENT 0 YS2-17e03.p1k chr12 346 459 489481 489480 F 114 0.00 459 reject_low 5 ALIGNMENT 0 YS2-17e03.q1k vc_7 62 444 13525 13524 F 383 0.00 482 reject_low 12 ALIGNMENT 278 YS2-17e03.p1k chr12 41 330 468642 468930 F 290 99.31 459 reject_low 2 ALIGNMENT 119 YS2-17e03.q1k chr12 267 149 472464 472582 C 119 100.00 482 reject_low 2 ALIGNMENT 0 YS2-17e03.p1k chr12 62 211 472464 472463 F 150 0.00 459 reject_low 4 ALIGNMENT 0 YS2-17e03.q1k chr12 148 62 485815 485814 C 87 0.00 482 reject_low 7 ALIGNMENT 0 YS2-17e03.q1k vc_2 441 62 2146 2145 C 380 0.00 482 reject_low 9 ALIGNMENT 119 YS2-17e03.q1k chr12 267 149 482044 482162 C 119 100.00 482 reject_low 4 ALIGNMENT 119 YS2-17e03.p1k chr12 212 330 472464 472582 F 119 100.00 459 reject_low 4 ALIGNMENT 0 YS2-17e03.q1k chr12 482 268 482045 482044 C 215 0.00 482 reject_low 4 ALIGNMENT 0 YS2-17e03.p1k chr12 62 211 482044 482043 F 150 0.00 459 reject_low 3 ALIGNMENT 41 YS2-17e03.q1k vc_4 442 482 5831 5871 F 41 100.00 482 reject_low 11 ALIGNMENT 0 YS2-17e03.p1k chr12 331 459 485814 485813 F 129 0.00 459 reject_low 6 ALIGNMENT 0 YS2-17e03.p1k chr12 62 211 489348 489347 F 150 0.00 459 reject_low 5 ALIGNMENT 0 YS2-17e03.q1k chr12 482 442 468639 468638 C 41 0.00 482 accept 0 ALIGNMENT 346 YS2-17e03.p1k chr12 41 440 459505 459912 F 400 96.75 459 accept 0 ALIGNMENT 0 YS2-17e03.q1k vc_4 62 441 5831 5830 F 380 0.00 482 reject_low 11 ALIGNMENT 0 YS2-17e03.q1k vc_3 441 62 2513 2512 C 380 0.00 482 reject_low 10 ALIGNMENT 0 YS2-17e03.q1k chr12 148 62 482163 482162 C 87 0.00 482 reject_low 4 ALIGNMENT 41 YS2-17e03.q1k vc_2 482 442 2105 2145 C 41 100.00 482 reject_low 9 ALIGNMENT 0 YS2-17e03.q1k vc_1 441 62 2513 2512 C 380 0.00 482 reject_low 8 ALIGNMENT 38 YS2-17e03.q1k vc_7 445 482 13525 13562 F 38 100.00 482 reject_low 12 ALIGNMENT 0 YS2-17e03.q1k chr12 482 268 489349 489348 C 215 0.00 482 reject_low 3 ALIGNMENT 0 YS2-17e03.q1k chr12 482 442 459502 459501 C 41 0.00 482 reject_low 1 ALIGNMENT 0 YS2-17e03.q1k chr12 148 62 472583 472582 C 87 0.00 482 reject_low 2 ALIGNMENT 1011 YS2-17e04.p1k chr12 1183 30 803153 804313 C 1154 96.27 1425 accept 0 ALIGNMENT 983 YS2-17e04.q1k chr12 30 1127 801984 803091 F 1098 97.63 1338 accept 0 ALIGNMENT 908 YS2-17e05.p1k chr16 1066 36 749387 750433 C 1031 97.38 1341 accept 0 ALIGNMENT 1002 YS2-17e05.q1k chr16 41 1139 744610 745712 F 1099 97.73 1359 accept 0 ALIGNMENT 0 YS2-17e06.p1k chr15 624 607 450831 450830 C 18 0.00 624 accept_chi 1 ALIGNMENT 0 YS2-17e06.q1k vc_5 619 62 37 36 C 558 0.00 658 reject_low 8 ALIGNMENT 538 YS2-17e06.p1k chr15 606 29 450830 451408 C 578 98.79 624 accept_chi 1 ALIGNMENT 0 YS2-17e06.q1k vc_5 619 62 5064 5063 C 558 0.00 658 reject_low 6 ALIGNMENT 0 YS2-17e06.q1k vc_1 616 62 2514 2513 C 555 0.00 658 reject_low 2 ALIGNMENT 39 YS2-17e06.q1k vc_5 658 620 5025 5063 C 39 100.00 658 reject_low 6 ALIGNMENT 543 YS2-17e06.q1k chr15 39 617 450830 451408 F 579 98.96 658 accept_chi 0 ALIGNMENT 42 YS2-17e06.q1k vc_1 658 617 2472 2513 C 42 100.00 658 reject_low 2 ALIGNMENT 38 YS2-17e06.q1k vc_7 621 658 13525 13562 F 38 100.00 658 reject_low 7 ALIGNMENT 36 YS2-17e06.q1k vc_5 655 620 1 36 C 36 100.00 658 reject_low 8 ALIGNMENT 0 YS2-17e06.q1k vc_7 62 620 13525 13524 F 559 0.00 658 reject_low 7 ALIGNMENT 0 YS2-17e06.q1k vc_2 616 62 2147 2146 C 555 0.00 658 reject_low 3 ALIGNMENT 0 YS2-17e06.q1k chr15 618 658 451408 451407 F 41 0.00 658 accept_chi 0 ALIGNMENT 0 YS2-17e06.q1k vc_4 62 616 5830 5829 F 555 0.00 658 reject_low 5 ALIGNMENT 42 YS2-17e06.q1k vc_4 617 658 5830 5871 F 42 100.00 658 reject_low 5 ALIGNMENT 42 YS2-17e06.q1k vc_3 658 617 2472 2513 C 42 100.00 658 reject_low 4 ALIGNMENT 0 YS2-17e06.q1k vc_3 616 62 2514 2513 C 555 0.00 658 reject_low 4 ALIGNMENT 42 YS2-17e06.q1k vc_2 658 617 2105 2146 C 42 100.00 658 reject_low 3 ALIGNMENT 720 YS2-17e09.p1k chr13 31 1191 533407 534559 F 1161 89.06 1414 accept 0 ALIGNMENT 860 YS2-17e09.q1k chr13 1194 39 535560 536724 C 1156 93.69 1350 accept 0 ALIGNMENT 963 YS2-17e10.q1k chr12 39 1161 770981 772110 F 1123 95.90 1373 accept 0 ALIGNMENT 957 YS2-17e10.p1k chr12 1127 23 772665 773782 C 1105 96.65 1387 accept 0 ALIGNMENT 0 YS2-17e11.q1k vc_7 62 273 13525 13524 F 212 0.00 311 reject_low 7 ALIGNMENT 0 YS2-17e11.q1k vc_5 272 62 5064 5063 C 211 0.00 311 reject_low 6 ALIGNMENT 41 YS2-17e11.q1k vc_4 271 311 5831 5871 F 41 100.00 311 reject_low 5 ALIGNMENT 0 YS2-17e11.q1k vc_2 270 62 2146 2145 C 209 0.00 311 reject_low 3 ALIGNMENT 36 YS2-17e11.q1k vc_5 308 273 1 36 C 36 100.00 311 reject_low 8 ALIGNMENT 0 YS2-17e11.q1k vc_3 270 62 2513 2512 C 209 0.00 311 reject_low 4 ALIGNMENT 0 YS2-17e11.q1k vc_1 270 62 2513 2512 C 209 0.00 311 reject_low 2 ALIGNMENT 217 YS2-17e11.q1k chr12 271 38 680520 680753 C 234 98.72 311 accept_chi 0 ALIGNMENT 0 YS2-17e11.q1k chr12 311 272 680521 680520 C 40 0.00 311 accept_chi 0 ALIGNMENT 0 YS2-17e11.q1k vc_4 62 270 5831 5830 F 209 0.00 311 reject_low 5 ALIGNMENT 0 YS2-17e11.q1k vc_5 272 62 37 36 C 211 0.00 311 reject_low 8 ALIGNMENT 41 YS2-17e11.q1k vc_1 311 271 2472 2512 C 41 100.00 311 reject_low 2 ALIGNMENT 187 YS2-17e11.p1k chr12 57 277 680529 680753 F 221 96.38 295 accept_chi 1 ALIGNMENT 39 YS2-17e11.q1k vc_5 311 273 5025 5063 C 39 100.00 311 reject_low 6 ALIGNMENT 38 YS2-17e11.q1k vc_7 274 311 13525 13562 F 38 100.00 311 reject_low 7 ALIGNMENT 41 YS2-17e11.q1k vc_3 311 271 2472 2512 C 41 100.00 311 reject_low 4 ALIGNMENT 41 YS2-17e11.q1k vc_2 311 271 2105 2145 C 41 100.00 311 reject_low 3 ALIGNMENT 0 YS2-17e11.p1k chr12 278 295 680753 680752 F 18 0.00 295 accept_chi 1 ALIGNMENT 0 YS2-17e12.q1k chr11 722 62 379397 379396 C 661 0.00 1431 reject_low 10 ALIGNMENT 0 YS2-17e12.q1k chr07 716 62 823567 823566 C 655 0.00 1431 reject_low 6 ALIGNMENT 0 YS2-17e12.q1k chr08 62 716 85288 85287 F 655 0.00 1431 reject_low 12 ALIGNMENT 0 YS2-17e12.q1k chr15 62 717 663807 663806 F 656 0.00 1431 reject_low 13 ALIGNMENT 0 YS2-17e12.q1k chr10 716 62 378356 378355 C 655 0.00 1431 reject_low 5 ALIGNMENT 0 YS2-17e12.q1k chr11 935 802 379319 379318 C 134 0.00 1431 reject_low 10 ALIGNMENT 0 YS2-17e12.q1k chr10 935 802 378272 378271 C 134 0.00 1431 reject_low 5 ALIGNMENT 0 YS2-17e12.q1k chr08 797 935 85367 85366 F 139 0.00 1431 reject_low 12 ALIGNMENT 906 YS2-17e12.q1k chr13 39 1116 419902 420979 F 1078 95.92 1431 accept 0 ALIGNMENT 0 YS2-17e12.q1k chr07 935 797 823488 823487 C 139 0.00 1431 reject_low 6 ALIGNMENT 0 YS2-17e12.q1k chr05 716 62 438776 438775 C 655 0.00 1431 reject_low 9 ALIGNMENT 79 YS2-17e12.q1k chr10 801 717 378271 378355 C 85 97.65 1431 reject_low 5 ALIGNMENT 0 YS2-17e12.q1k chr11 62 716 307783 307782 F 655 0.00 1431 reject_low 4 ALIGNMENT 0 YS2-17e12.q1k chr07 806 935 412379 412378 F 130 0.00 1431 reject_low 2 ALIGNMENT 0 YS2-17e12.q1k chr13 797 935 372517 372516 F 139 0.00 1431 reject_low 7 ALIGNMENT 0 YS2-17e12.q1k chr12 62 714 687853 687852 F 653 0.00 1431 reject_low 1 ALIGNMENT 0 YS2-17e12.q1k chr11 807 935 307872 307871 F 129 0.00 1431 reject_low 4 ALIGNMENT 79 YS2-17e12.q1k chr07 796 717 823487 823566 C 80 100.00 1431 reject_low 6 ALIGNMENT 79 YS2-17e12.q1k chr13 717 796 372438 372517 F 80 100.00 1431 reject_low 7 ALIGNMENT 76 YS2-17e12.q1k chr08 717 796 85288 85367 F 80 98.75 1431 reject_low 12 ALIGNMENT 87 YS2-17e12.q1k chr12 715 804 687853 687942 F 90 98.89 1431 reject_low 1 ALIGNMENT 0 YS2-17e12.q1k chr05 935 798 438696 438695 C 138 0.00 1431 reject_low 9 ALIGNMENT 882 YS2-17e12.p1k chr13 1009 34 423701 424689 C 976 98.16 1323 accept 0 ALIGNMENT 0 YS2-17e12.q1k chr07 62 714 412289 412288 F 653 0.00 1431 reject_low 2 ALIGNMENT 76 YS2-17e12.q1k chr15 718 796 663807 663885 F 79 98.73 1431 reject_low 13 ALIGNMENT 78 YS2-17e12.q1k chr05 797 717 438695 438775 C 81 98.77 1431 reject_low 9 ALIGNMENT 0 YS2-17e12.q1k chr05 715 62 469533 469532 C 654 0.00 1431 reject_low 3 ALIGNMENT 76 YS2-17e12.q1k chr11 801 723 379318 379396 C 79 98.73 1431 reject_low 10 ALIGNMENT 0 YS2-17e12.q1k chr13 62 716 586629 586628 F 655 0.00 1431 reject_low 8 ALIGNMENT 0 YS2-17e12.q1k chr05 935 805 469445 469444 C 131 0.00 1431 reject_low 3 ALIGNMENT 0 YS2-17e12.q1k chr15 797 935 663885 663884 F 139 0.00 1431 reject_low 13 ALIGNMENT 0 YS2-17e12.q1k chr07 797 935 73901 73900 F 139 0.00 1431 reject_low 11 ALIGNMENT 79 YS2-17e12.q1k chr07 715 805 412289 412379 F 91 95.60 1431 reject_low 2 ALIGNMENT 0 YS2-17e12.q1k chr07 62 716 73822 73821 F 655 0.00 1431 reject_low 11 ALIGNMENT 76 YS2-17e12.q1k chr07 717 796 73822 73901 F 80 98.75 1431 reject_low 11 ALIGNMENT 78 YS2-17e12.q1k chr11 717 806 307783 307872 F 90 95.56 1431 reject_low 4 ALIGNMENT 0 YS2-17e12.q1k chr12 805 935 687942 687941 F 131 0.00 1431 reject_low 1 ALIGNMENT 83 YS2-17e12.q1k chr05 804 716 469444 469532 C 89 97.75 1431 reject_low 3 ALIGNMENT 79 YS2-17e12.q1k chr13 717 796 586629 586708 F 80 100.00 1431 reject_low 8 ALIGNMENT 0 YS2-17e12.q1k chr13 62 716 372438 372437 F 655 0.00 1431 reject_low 7 ALIGNMENT 0 YS2-17e12.q1k chr13 797 935 586708 586707 F 139 0.00 1431 reject_low 8 ALIGNMENT 0 YS2-17e13.p1k chr08 243 261 164082 164081 F 19 0.00 261 accept_chi 0 ALIGNMENT 41 YS2-17e13.q1k vc_4 240 280 5831 5871 F 41 100.00 280 reject_low 4 ALIGNMENT 36 YS2-17e13.q1k vc_5 277 242 1 36 C 36 100.00 280 reject_low 7 ALIGNMENT 39 YS2-17e13.q1k vc_5 280 242 5025 5063 C 39 100.00 280 reject_low 5 ALIGNMENT 0 YS2-17e13.q1k vc_4 62 239 5831 5830 F 178 0.00 280 reject_low 4 ALIGNMENT 0 YS2-17e13.q1k vc_5 241 62 37 36 C 180 0.00 280 reject_low 7 ALIGNMENT 0 YS2-17e13.q1k vc_3 239 62 2513 2512 C 178 0.00 280 reject_low 3 ALIGNMENT 41 YS2-17e13.q1k vc_1 280 240 2472 2512 C 41 100.00 280 reject_low 2 ALIGNMENT 41 YS2-17e13.q1k vc_3 280 240 2472 2512 C 41 100.00 280 reject_low 3 ALIGNMENT 0 YS2-17e13.q1k chr08 280 240 163871 163870 C 41 0.00 280 accept_chi 1 ALIGNMENT 0 YS2-17e13.q1k vc_1 239 62 2513 2512 C 178 0.00 280 reject_low 2 ALIGNMENT 0 YS2-17e13.q1k vc_7 62 242 13525 13524 F 181 0.00 280 reject_low 6 ALIGNMENT 193 YS2-17e13.p1k chr08 29 242 163870 164082 F 214 97.66 261 accept_chi 0 ALIGNMENT 0 YS2-17e13.q1k vc_5 241 62 5064 5063 C 180 0.00 280 reject_low 5 ALIGNMENT 191 YS2-17e13.q1k chr08 239 30 163870 164080 C 210 98.10 280 accept_chi 1 ALIGNMENT 38 YS2-17e13.q1k vc_7 243 280 13525 13562 F 38 100.00 280 reject_low 6 ALIGNMENT 57 YS2-17e14.p1k chr14 243 174 726945 727012 C 70 95.71 266 accept 0 ALIGNMENT 0 YS2-17e14.p1k chr14 266 244 726946 726945 C 23 0.00 266 accept 0 ALIGNMENT 64 YS2-17e15.q1k vc_4 305 536 1876 2096 F 232 79.31 761 reject_low 14 ALIGNMENT 0 YS2-17e15.q1k vc_7 53 54 5172 6360 C 0 0.00 761 reject_low 11 ALIGNMENT 190 YS2-17e15.p1k vc_6 1 342 3712 4039 F 342 88.30 560 reject_low 6 ALIGNMENT 43 YS2-17e15.q1k vc_4 242 304 1552 1614 F 63 90.48 761 reject_low 14 ALIGNMENT 0 YS2-17e15.q1k vc_7 312 304 4692 4921 C 9 0.00 761 reject_low 11 ALIGNMENT 193 YS2-17e15.p1k vc_3 363 1 1400 1749 C 363 87.60 560 reject_low 4 ALIGNMENT 193 YS2-17e15.p1k vc_1 363 1 1400 1749 C 363 87.60 560 reject_low 2 ALIGNMENT 187 YS2-17e15.p1k vc_7 1 363 13918 14267 F 363 87.05 560 reject_low 5 ALIGNMENT 51 YS2-17e15.q1k vc_7 54 3 6360 6411 C 52 100.00 761|1,0 reject_low 11 ALIGNMENT 43 YS2-17e15.q1k vc_4 304 242 6273 6335 C 63 90.48 761 reject_low 13 ALIGNMENT 193 YS2-17e15.p1k vc_5 363 1 4320 4669 C 363 87.60 560 reject_vc 0 ALIGNMENT 299 YS2-17e15.q1k vc_4 425 1 5233 5654 C 425 91.06 761 reject_low 7 ALIGNMENT 187 YS2-17e15.p1k vc_7 1 363 456 805 F 363 87.05 560 reject_vc 1 ALIGNMENT 43 YS2-17e15.q1k vc_4 304 242 46 108 C 63 90.48 761 reject_low 12 ALIGNMENT 215 YS2-17e15.q1k vc_7 303 53 4922 5172 C 251 95.22 761|0,1 reject_low 11 ALIGNMENT 0 YS2-17e15.q1k vc_4 305 304 1615 1875 F 0 0.00 761 reject_low 14 ALIGNMENT 326 YS2-17e15.q1k vc_5 1 536 2556 3080 F 536 88.43 761 reject_vc 0 ALIGNMENT 271 YS2-17e15.q1k vc_1 1 308 2689 2996 F 308 96.10 761 reject_low 8 ALIGNMENT 193 YS2-17e15.p1k vc_2 363 1 1400 1749 C 363 87.60 560 reject_low 3 ALIGNMENT 271 YS2-17e15.q1k vc_2 1 308 2322 2629 F 308 96.10 761 reject_low 9 ALIGNMENT 325 YS2-17e15.q1k vc_7 535 1 2046 2569 C 535 88.41 761 reject_vc 1 ALIGNMENT 39 YS2-17e15.q1k vc_7 425 313 4584 4691 C 113 82.30 761 reject_low 11 ALIGNMENT 271 YS2-17e15.q1k vc_3 1 308 2689 2996 F 308 96.10 761 reject_low 10 ALIGNMENT 253 YS2-17e16.p1k vc_5 376 7 4291 4663 C 370 90.54 592 reject_vc 0 ALIGNMENT 285 YS2-17e16.q1k vc_2 1 302 2322 2624 F 302 98.34 780 reject_low 9 ALIGNMENT 253 YS2-17e16.p1k vc_1 376 7 1371 1743 C 370 90.54 592 reject_low 2 ALIGNMENT 0 YS2-17e16.q1k vc_4 237 62 113 112 C 176 0.00 780 reject_low 12 ALIGNMENT 247 YS2-17e16.p1k vc_7 7 376 13924 14296 F 370 90.00 592 reject_low 6 ALIGNMENT 0 YS2-17e16.q1k vc_4 237 62 6340 6339 C 176 0.00 780 reject_low 14 ALIGNMENT 394 YS2-17e16.q1k vc_5 1 542 2556 3112 F 542 91.70 780 reject_vc 0 ALIGNMENT 253 YS2-17e16.p1k vc_2 376 7 1371 1743 C 370 90.54 592 reject_low 3 ALIGNMENT 285 YS2-17e16.q1k vc_3 1 302 2689 2991 F 302 98.34 780 reject_low 10 ALIGNMENT 60 YS2-17e16.q1k vc_7 412 304 4585 4699 C 109 87.16 780 reject_low 11 ALIGNMENT 0 YS2-17e16.q1k vc_7 303 303 4700 4921 C 1 0.00 780 reject_low 11 ALIGNMENT 253 YS2-17e16.p1k vc_6 7 376 3718 4090 F 370 90.54 592 reject_low 5 ALIGNMENT 253 YS2-17e16.p1k vc_3 376 7 1371 1743 C 370 90.54 592 reject_low 4 ALIGNMENT 285 YS2-17e16.q1k vc_1 1 302 2689 2991 F 302 98.34 780 reject_low 8 ALIGNMENT 54 YS2-17e16.q1k vc_4 303 238 6273 6339 C 66 95.45 780 reject_low 14 ALIGNMENT 51 YS2-17e16.q1k vc_7 54 3 6360 6411 C 52 100.00 780|1,0 reject_low 11 ALIGNMENT 54 YS2-17e16.q1k vc_4 238 303 1548 1614 F 66 95.45 780 reject_low 13 ALIGNMENT 0 YS2-17e16.q1k vc_4 62 237 1548 1547 F 176 0.00 780 reject_low 13 ALIGNMENT 54 YS2-17e16.q1k vc_4 303 238 46 112 C 66 95.45 780 reject_low 12 ALIGNMENT 247 YS2-17e16.p1k vc_7 7 376 462 834 F 370 90.00 592 reject_low 1 ALIGNMENT 0 YS2-17e16.q1k vc_7 53 54 5172 6360 C 0 0.00 780 reject_low 11 ALIGNMENT 379 YS2-17e16.q1k vc_7 500 1 2058 2569 C 500 92.80 780 reject_low 1 ALIGNMENT 340 YS2-17e16.q1k vc_4 412 1 5234 5654 C 412 94.90 780 reject_low 7 ALIGNMENT 230 YS2-17e16.q1k vc_7 302 53 4922 5172 C 250 97.60 780|0,1 reject_low 11 ALIGNMENT 48 YS2-17e17.q1k vc_7 894 843 6360 6411 C 52 98.08 1356|1,0 reject_low 10 ALIGNMENT 0 YS2-17e17.q1k vc_2 642 62 2146 2145 C 581 0.00 1356 reject_low 12 ALIGNMENT 304 YS2-17e17.q1k vc_7 1183 683 2218 2727 C 501 88.02 1356 reject_low 2 ALIGNMENT 0 YS2-17e17.q1k vc_2 764 684 2106 2105 C 81 0.00 1356 reject_low 12 ALIGNMENT 0 YS2-17e17.q1k vc_4 682 62 5813 5812 C 621 0.00 1356 reject_low 3 ALIGNMENT 552 YS2-17e17.p1k chr15 626 26 960447 961046 C 601 99.17 645 accept 0 ALIGNMENT 0 YS2-17e17.q1k vc_3 642 62 2513 2512 C 581 0.00 1356 reject_low 13 ALIGNMENT 0 YS2-17e17.q1k vc_2 62 682 2164 2163 F 621 0.00 1356 reject_low 5 ALIGNMENT 0 YS2-17e17.q1k vc_7 893 894 5172 6360 C 0 0.00 1356 reject_low 10 ALIGNMENT 300 YS2-17e17.q1k vc_1 683 1130 2531 2986 F 448 90.18 1356 reject_low 4 ALIGNMENT 556 YS2-17e17.q1k chr15 35 643 960443 961050 F 609 98.85 1356 accept 0 ALIGNMENT 0 YS2-17e17.q1k vc_1 62 682 2531 2530 F 621 0.00 1356 reject_low 4 ALIGNMENT 0 YS2-17e17.q1k vc_5 764 681 2 1 C 84 0.00 1356 reject_low 17 ALIGNMENT 41 YS2-17e17.q1k vc_2 683 643 2105 2145 C 41 100.00 1356 reject_low 12 ALIGNMENT 0 YS2-17e17.q1k vc_7 684 764 100 99 F 81 0.00 1356 reject_low 15 ALIGNMENT 304 YS2-17e17.q1k vc_5 683 1183 2398 2907 F 501 88.02 1356 reject_low 1 ALIGNMENT 0 YS2-17e17.q1k vc_4 682 62 1535 1534 C 621 0.00 1356 reject_low 9 ALIGNMENT 87 YS2-17e17.q1k vc_4 771 683 1446 1534 C 89 100.00 1356 reject_low 9 ALIGNMENT 41 YS2-17e17.q1k vc_3 683 643 2472 2512 C 41 100.00 1356 reject_low 13 ALIGNMENT 154 YS2-17e17.q1k vc_4 683 844 126 287 F 162 98.77 1356 reject_low 7 ALIGNMENT 0 YS2-17e17.q1k vc_5 62 682 2398 2397 F 621 0.00 1356 reject_low 1 ALIGNMENT 0 YS2-17e17.q1k vc_7 62 645 13525 13524 F 584 0.00 1356 reject_low 16 ALIGNMENT 297 YS2-17e17.q1k vc_4 1183 683 5301 5812 C 501 87.82 1356 reject_low 3 ALIGNMENT 0 YS2-17e17.q1k vc_1 764 684 2473 2472 C 81 0.00 1356 reject_low 11 ALIGNMENT 0 YS2-17e17.q1k vc_1 642 62 2513 2512 C 581 0.00 1356 reject_low 11 ALIGNMENT 0 YS2-17e17.p1k chr15 645 627 960448 960447 C 19 0.00 645 accept 0 ALIGNMENT 0 YS2-17e17.q1k vc_4 62 682 126 125 F 621 0.00 1356 reject_low 7 ALIGNMENT 300 YS2-17e17.q1k vc_2 683 1130 2164 2619 F 448 90.18 1356 reject_low 5 ALIGNMENT 38 YS2-17e17.q1k vc_7 646 683 63 100 F 38 100.00 1356 reject_low 15 ALIGNMENT 0 YS2-17e17.q1k vc_5 644 62 37 36 C 583 0.00 1356 reject_low 17 ALIGNMENT 41 YS2-17e17.q1k vc_4 643 683 5831 5871 F 41 100.00 1356 reject_low 8 ALIGNMENT 0 YS2-17e17.q1k vc_7 842 62 6412 6411 C 781 0.00 1356 reject_low 10 ALIGNMENT 154 YS2-17e17.q1k vc_4 683 844 6353 6514 F 162 98.77 1356|1,0 reject_low 8 ALIGNMENT 38 YS2-17e17.q1k vc_7 646 683 13525 13562 F 38 100.00 1356 reject_low 16 ALIGNMENT 0 YS2-17e17.q1k vc_4 62 642 5831 5830 F 581 0.00 1356 reject_low 8 ALIGNMENT 36 YS2-17e17.q1k vc_5 680 645 1 36 C 36 100.00 1356 reject_low 17 ALIGNMENT 0 YS2-17e17.q1k vc_5 644 62 5064 5063 C 583 0.00 1356 reject_low 14 ALIGNMENT 0 YS2-17e17.q1k vc_7 684 764 13562 13561 F 81 0.00 1356 reject_low 16 ALIGNMENT 0 YS2-17e17.q1k vc_3 62 682 2531 2530 F 621 0.00 1356 reject_low 6 ALIGNMENT 0 YS2-17e17.q1k chr15 644 764 961050 961049 F 121 0.00 1356 accept 0 ALIGNMENT 0 YS2-17e17.q1k vc_3 764 684 2473 2472 C 81 0.00 1356 reject_low 13 ALIGNMENT 0 YS2-17e17.q1k vc_7 62 645 63 62 F 584 0.00 1356 reject_low 15 ALIGNMENT 0 YS2-17e17.q1k vc_5 764 684 5026 5025 C 81 0.00 1356 reject_low 14 ALIGNMENT 39 YS2-17e17.q1k vc_5 683 645 5025 5063 C 39 100.00 1356 reject_low 14 ALIGNMENT 300 YS2-17e17.q1k vc_3 683 1130 2531 2986 F 448 90.18 1356 reject_low 6 ALIGNMENT 0 YS2-17e17.q1k vc_7 682 62 2728 2727 C 621 0.00 1356 reject_low 2 ALIGNMENT 41 YS2-17e17.q1k vc_1 683 643 2472 2512 C 41 100.00 1356 reject_low 11 ALIGNMENT 98 YS2-17e17.q1k vc_7 1130 893 4927 5172 C 238 82.35 1356|0,1 reject_low 10 ALIGNMENT 0 YS2-17e17.q1k vc_4 684 683 5872 6353 F 0 0.00 1356 reject_low 8 ALIGNMENT 1013 YS2-17e18.p1k chr12 1271 26 441091 442350 C 1246 95.02 1413 accept 0 ALIGNMENT 954 YS2-17e18.q1k chr12 39 1127 437010 438112 F 1089 97.52 1347 accept 0 ALIGNMENT 212 YS2-17e19.p1k chr08 885 611 543667 543941 C 275 94.55 1298 reject_low 13 ALIGNMENT 0 YS2-17e19.p1k chr03 910 886 124189 124188 C 25 0.00 1298 reject_low 20 ALIGNMENT 0 YS2-17e19.p1k chr02 62 610 226624 226623 F 549 0.00 1298 reject_low 2 ALIGNMENT 0 YS2-17e19.p1k chr08 910 886 549364 549363 C 25 0.00 1298 reject_low 15 ALIGNMENT 0 YS2-17e19.p1k chr08 610 62 543942 543941 C 549 0.00 1298 reject_low 13 ALIGNMENT 914 YS2-17e19.p1k chr03 1058 32 142622 143656 C 1027 97.76 1298 accept 0 ALIGNMENT 0 YS2-17e19.p1k chr11 910 886 517153 517152 C 25 0.00 1298 reject_low 3 ALIGNMENT 61 YS2-17e19.p1k chr06 611 890 137908 138188 F 280 76.79 1298 reject_low 26 ALIGNMENT 0 YS2-17e19.p1k chr12 610 62 215419 215418 C 549 0.00 1298 reject_low 23 ALIGNMENT 0 YS2-17e19.p1k chr06 62 613 137658 137657 F 552 0.00 1298 reject_low 24 ALIGNMENT 216 YS2-17e19.p1k chr15 610 885 594820 595095 F 276 94.93 1298 reject_low 7 ALIGNMENT 218 YS2-17e19.p1k chr02 611 885 226624 226898 F 275 95.27 1298 reject_low 2 ALIGNMENT 194 YS2-17e19.p1k chr03 885 611 124188 124462 C 275 92.36 1298 reject_low 20 ALIGNMENT 0 YS2-17e19.p1k chr07 910 886 817456 817455 C 25 0.00 1298 reject_low 9 ALIGNMENT 203 YS2-17e19.p1k chr06 885 611 161855 162129 C 275 93.45 1298 reject_low 17 ALIGNMENT 139 YS2-17e19.p1k chr06 614 876 137658 137907 F 263 88.59 1298 reject_low 24 ALIGNMENT 214 YS2-17e19.p1k chr03 610 885 151517 151791 F 276 94.93 1298 reject_low 8 ALIGNMENT 212 YS2-17e19.p1k chr13 611 885 184170 184444 F 275 94.55 1298 reject_low 14 ALIGNMENT 0 YS2-17e19.p1k chr02 62 609 221039 221038 F 548 0.00 1298 reject_low 12 ALIGNMENT 61 YS2-17e19.p1k chr06 611 890 143535 143815 F 280 76.79 1298 reject_low 27 ALIGNMENT 0 YS2-17e19.p1k chr02 62 609 259575 259574 F 548 0.00 1298 reject_low 11 ALIGNMENT 0 YS2-17e19.p1k chr06 62 610 143535 143534 F 549 0.00 1298 reject_low 27 ALIGNMENT 0 YS2-17e19.p1k chr03 610 62 124463 124462 C 549 0.00 1298 reject_low 20 ALIGNMENT 0 YS2-17e19.p1k chr15 886 910 600677 600676 F 25 0.00 1298 reject_low 10 ALIGNMENT 0 YS2-17e19.p1k chr13 610 62 357336 357335 C 549 0.00 1298 reject_low 4 ALIGNMENT 0 YS2-17e19.p1k chr07 886 910 541632 541631 F 25 0.00 1298 reject_low 22 ALIGNMENT 0 YS2-17e19.p1k chr06 62 662 158408 158407 F 601 0.00 1298 reject_low 21 ALIGNMENT 215 YS2-17e19.p1k chr07 885 611 817455 817729 C 275 94.91 1298 reject_low 9 ALIGNMENT 0 YS2-17e19.p1k chr07 609 62 823313 823312 C 548 0.00 1298 reject_low 6 ALIGNMENT 0 YS2-17e19.p1k chr13 910 886 362644 362643 C 25 0.00 1298 reject_low 5 ALIGNMENT 0 YS2-17e19.p1k chr15 62 609 594820 594819 F 548 0.00 1298 reject_low 7 ALIGNMENT 210 YS2-17e19.p1k chr08 885 610 549363 549638 C 276 94.20 1298 reject_low 15 ALIGNMENT 189 YS2-17e19.p1k chr07 611 885 541352 541632 F 275 92.00 1298 reject_low 22 ALIGNMENT 70 YS2-17e19.p1k chr03 885 611 168652 168928 C 275 77.82 1298 reject_low 28 ALIGNMENT 0 YS2-17e19.p1k chr02 886 910 259850 259849 F 25 0.00 1298 reject_low 11 ALIGNMENT 212 YS2-17e19.p1k chr02 610 885 221039 221316 F 276 94.57 1298 reject_low 12 ALIGNMENT 0 YS2-17e19.p1k chr06 886 908 158628 162210 F 23 0.00 1298 reject_low 21 ALIGNMENT 0 YS2-17e19.p1k chr13 610 62 362918 362917 C 549 0.00 1298 reject_low 5 ALIGNMENT 51 YS2-17e19.p1k chr06 909 989 162211 162292 F 81 87.65 1298 reject_low 21 ALIGNMENT 0 YS2-17e19.p1k chr07 62 609 535214 535213 F 548 0.00 1298 reject_low 1 ALIGNMENT 0 YS2-17e19.p1k chr03 886 910 149750 149749 F 25 0.00 1298 reject_low 25 ALIGNMENT 0 YS2-17e19.p1k chr03 62 609 151517 151516 F 548 0.00 1298 reject_low 8 ALIGNMENT 215 YS2-17e19.p1k chr15 611 885 600403 600677 F 275 94.91 1298 reject_low 10 ALIGNMENT 0 YS2-17e19.p1k chr13 886 910 184444 184443 F 25 0.00 1298 reject_low 14 ALIGNMENT 0 YS2-17e19.p1k chr03 610 62 168929 168928 C 549 0.00 1298 reject_low 28 ALIGNMENT 0 YS2-17e19.p1k chr07 910 886 823038 823037 C 25 0.00 1298 reject_low 6 ALIGNMENT 0 YS2-17e19.p1k chr06 62 610 137908 137907 F 549 0.00 1298 reject_low 26 ALIGNMENT 218 YS2-17e19.p1k chr13 885 611 362643 362917 C 275 95.27 1298 reject_low 5 ALIGNMENT 0 YS2-17e19.p1k chr07 62 610 931691 931690 F 549 0.00 1298 reject_low 16 ALIGNMENT 0 YS2-17e19.p1k chr02 886 910 221316 221315 F 25 0.00 1298 reject_low 12 ALIGNMENT 218 YS2-17e19.p1k chr13 885 611 357061 357335 C 275 95.27 1298 reject_low 4 ALIGNMENT 0 YS2-17e19.p1k chr03 886 910 151791 151790 F 25 0.00 1298 reject_low 8 ALIGNMENT 0 YS2-17e19.p1k chr06 877 910 137907 137906 F 34 0.00 1298 reject_low 24 ALIGNMENT 0 YS2-17e19.p1k chr08 609 62 549639 549638 C 548 0.00 1298 reject_low 15 ALIGNMENT 0 YS2-17e19.p1k chr07 610 62 817730 817729 C 549 0.00 1298 reject_low 9 ALIGNMENT 186 YS2-17e19.p1k chr12 885 611 215138 215418 C 275 91.64 1298 reject_low 23 ALIGNMENT 0 YS2-17e19.p1k chr12 910 886 215139 215138 C 25 0.00 1298 reject_low 23 ALIGNMENT 0 YS2-17e19.p1k chr07 886 910 535489 535488 F 25 0.00 1298 reject_low 1 ALIGNMENT 0 YS2-17e19.p1k chr11 910 886 457841 457840 C 25 0.00 1298 reject_low 19 ALIGNMENT 0 YS2-17e19.p1k chr06 891 910 143815 143814 F 20 0.00 1298 reject_low 27 ALIGNMENT 84 YS2-17e19.p1k chr03 662 885 149531 149750 F 224 83.04 1298 reject_low 25 ALIGNMENT 0 YS2-17e19.p1k chr11 610 62 517427 517426 C 549 0.00 1298 reject_low 3 ALIGNMENT 1005 YS2-17e19.q1k chr03 31 1221 138684 139888 F 1191 96.56 1314 accept 0 ALIGNMENT 0 YS2-17e19.p1k chr02 886 910 226898 226897 F 25 0.00 1298 reject_low 2 ALIGNMENT 0 YS2-17e19.p1k chr06 910 886 161856 161855 C 25 0.00 1298 reject_low 17 ALIGNMENT 219 YS2-17e19.p1k chr07 610 885 535214 535489 F 276 95.29 1298 reject_low 1 ALIGNMENT 0 YS2-17e19.p1k chr15 886 910 595095 595094 F 25 0.00 1298 reject_low 7 ALIGNMENT 0 YS2-17e19.p1k chr08 910 886 543668 543667 C 25 0.00 1298 reject_low 13 ALIGNMENT 0 YS2-17e19.p1k chr07 886 910 931965 931964 F 25 0.00 1298 reject_low 16 ALIGNMENT 0 YS2-17e19.p1k chr08 610 62 116748 116747 C 549 0.00 1298 reject_low 18 ALIGNMENT 200 YS2-17e19.p1k chr11 885 611 457840 458114 C 275 93.09 1298 reject_low 19 ALIGNMENT 0 YS2-17e19.p1k chr08 910 886 116474 116473 C 25 0.00 1298 reject_low 18 ALIGNMENT 0 YS2-17e19.p1k chr03 910 886 168653 168652 C 25 0.00 1298 reject_low 28 ALIGNMENT 209 YS2-17e19.p1k chr07 611 885 931691 931965 F 275 94.18 1298 reject_low 16 ALIGNMENT 0 YS2-17e19.p1k chr03 62 661 149531 149530 F 600 0.00 1298 reject_low 25 ALIGNMENT 216 YS2-17e19.p1k chr07 885 610 823037 823312 C 276 94.93 1298 reject_low 6 ALIGNMENT 79 YS2-17e19.p1k chr06 663 885 158408 158627 F 223 81.61 1298 reject_low 21 ALIGNMENT 0 YS2-17e19.p1k chr07 62 610 541352 541351 F 549 0.00 1298 reject_low 22 ALIGNMENT 0 YS2-17e19.p1k chr06 610 62 162130 162129 C 549 0.00 1298 reject_low 17 ALIGNMENT 0 YS2-17e19.p1k chr15 62 610 600403 600402 F 549 0.00 1298 reject_low 10 ALIGNMENT 0 YS2-17e19.p1k chr06 891 910 138188 138187 F 20 0.00 1298 reject_low 26 ALIGNMENT 0 YS2-17e19.p1k chr13 910 886 357062 357061 C 25 0.00 1298 reject_low 4 ALIGNMENT 0 YS2-17e19.p1k chr13 62 610 184170 184169 F 549 0.00 1298 reject_low 14 ALIGNMENT 0 YS2-17e19.p1k chr11 610 62 458115 458114 C 549 0.00 1298 reject_low 19 ALIGNMENT 218 YS2-17e19.p1k chr11 885 611 517152 517426 C 275 95.27 1298 reject_low 3 ALIGNMENT 203 YS2-17e19.p1k chr08 885 611 116473 116747 C 275 93.45 1298 reject_low 18 ALIGNMENT 213 YS2-17e19.p1k chr02 610 885 259575 259850 F 276 94.57 1298 reject_low 11 ALIGNMENT 0 YS2-17e20.q1k vc_4 940 939 5872 6353 F 0 0.00 1401 reject_low 7 ALIGNMENT 35 YS2-17e20.q1k vc_1 939 899 2472 2512 C 41 95.12 1401 reject_low 9 ALIGNMENT 170 YS2-17e20.q1k vc_5 939 1283 2398 2748 F 345 85.22 1401 reject_vc 3 ALIGNMENT 0 YS2-17e20.q1k vc_4 62 938 126 125 F 877 0.00 1401 reject_low 6 ALIGNMENT 0 YS2-17e20.q1k vc_5 900 62 37 36 C 839 0.00 1401 reject_low 13 ALIGNMENT 30 YS2-17e20.q1k vc_5 936 901 1 36 C 36 94.44 1401 reject_low 13 ALIGNMENT 0 YS2-17e20.q1k vc_2 62 938 2164 2163 F 877 0.00 1401 reject_vc 1 ALIGNMENT 170 YS2-17e20.q1k vc_2 939 1283 2164 2514 F 345 85.22 1401 reject_vc 1 ALIGNMENT 33 YS2-17e20.q1k vc_5 939 901 5025 5063 C 39 94.87 1401 reject_low 12 ALIGNMENT 0 YS2-17e20.q1k vc_1 62 938 2531 2530 F 877 0.00 1401 reject_vc 0 ALIGNMENT 0 YS2-17e20.q1k vc_4 62 898 5831 5830 F 837 0.00 1401 reject_low 7 ALIGNMENT 35 YS2-17e20.q1k vc_2 939 899 2105 2145 C 41 95.12 1401 reject_low 10 ALIGNMENT 0 YS2-17e20.q1k vc_5 900 62 5064 5063 C 839 0.00 1401 reject_low 12 ALIGNMENT 170 YS2-17e20.q1k vc_3 939 1283 2531 2881 F 345 85.22 1401 reject_vc 2 ALIGNMENT 122 YS2-17e20.q1k vc_4 939 1096 126 282 F 158 93.04 1401 reject_low 6 ALIGNMENT 0 YS2-17e20.q1k vc_4 938 62 5813 5812 C 877 0.00 1401 reject_vc 4 ALIGNMENT 74 YS2-17e20.q1k vc_4 1028 939 1446 1534 C 90 96.67 1401 reject_low 8 ALIGNMENT 0 YS2-17e20.q1k vc_4 938 62 1535 1534 C 877 0.00 1401 reject_low 8 ALIGNMENT 0 YS2-17e20.q1k vc_3 898 62 2513 2512 C 837 0.00 1401 reject_low 11 ALIGNMENT 0 YS2-17e20.q1k vc_2 898 62 2146 2145 C 837 0.00 1401 reject_low 10 ALIGNMENT 167 YS2-17e20.q1k vc_7 1251 939 2414 2727 C 313 86.26 1401 reject_vc 5 ALIGNMENT 35 YS2-17e20.q1k vc_3 939 899 2472 2512 C 41 95.12 1401 reject_low 11 ALIGNMENT 168 YS2-17e20.q1k vc_4 1283 939 5460 5812 C 345 84.93 1401 reject_vc 4 ALIGNMENT 35 YS2-17e20.q1k vc_4 899 939 5831 5871 F 41 95.12 1401 reject_low 7 ALIGNMENT 122 YS2-17e20.q1k vc_4 939 1096 6353 6509 F 158 93.04 1401|1,0 reject_low 7 ALIGNMENT 0 YS2-17e20.q1k vc_3 62 938 2531 2530 F 877 0.00 1401 reject_vc 2 ALIGNMENT 170 YS2-17e20.q1k vc_1 939 1283 2531 2881 F 345 85.22 1401 reject_vc 0 ALIGNMENT 0 YS2-17e20.q1k vc_7 938 62 2728 2727 C 877 0.00 1401 reject_vc 5 ALIGNMENT 0 YS2-17e20.q1k vc_5 62 938 2398 2397 F 877 0.00 1401 reject_vc 3 ALIGNMENT 0 YS2-17e20.q1k vc_1 898 62 2513 2512 C 837 0.00 1401 reject_low 9 ALIGNMENT 969 YS2-17e21.p1k chr04 1158 65 828246 829346 C 1094 97.26 1305 accept 0 ALIGNMENT 1037 YS2-17e21.q1k chr04 34 1245 824475 825690 F 1212 96.70 1297 accept 0 ALIGNMENT 990 YS2-17e22.q1k chr02 1180 36 100313 101472 C 1145 96.24 1343 accept 0 ALIGNMENT 989 YS2-17e22.p1k chr02 25 1173 96894 98050 F 1149 95.91 1285 accept 0 ALIGNMENT 0 YS2-17e23.p1k chr06 312 331 31729 31728 F 20 0.00 1056 reject_low 2 ALIGNMENT 969 YS2-17e23.q1k chr12 37 1191 463349 464499 F 1155 95.06 1286 manual 1 ALIGNMENT 354 YS2-17e23.p1k chr12 603 133 468162 468624 C 471 94.69 1056 manual 1 ALIGNMENT 354 YS2-17e23.p1k chr12 603 133 459025 459487 C 471 94.69 1056 manual 0 ALIGNMENT 970 YS2-17e23.q1k chr12 37 1203 454212 455376 F 1167 94.86 1286 manual 0 ALIGNMENT 94 YS2-17e23.p1k chr06 204 311 31622 31729 F 108 98.15 1056 reject_low 2 ALIGNMENT 0 YS2-17e24.q1k chr05 62 149 492691 492690 F 88 0.00 1281 reject_low 15 ALIGNMENT 159 YS2-17e24.q1k chr01 38 287 165915 166163 F 250 90.40 1281 reject_low 28 ALIGNMENT 762 YS2-17e24.q1k chr14 38 1152 96698 97818 F 1115 91.48 1281 reject_low 26 ALIGNMENT 959 YS2-17e24.p1k chr16 1217 27 853856 855064 C 1191 94.88 1299 ambiguous_trans 4 ALIGNMENT 989 YS2-17e24.p1k chr12 1217 27 218312 219520 C 1191 95.72 1299 ambiguous_trans_ua 6 ALIGNMENT 754 YS2-17e24.q1k chr13 1152 38 201042 202167 C 1115 91.12 1281 reject_low 11 ALIGNMENT 752 YS2-17e24.q1k chr01 38 1152 160327 161452 F 1115 91.03 1281 reject_low 9 ALIGNMENT 739 YS2-17e24.q1k chr15 1152 38 599526 600646 C 1115 90.85 1281 reject_low 13 ALIGNMENT 986 YS2-17e24.p1k chr05 1217 27 495722 496930 C 1191 95.63 1299 reject_low 15 ALIGNMENT 980 YS2-17e24.p1k chr16 27 1217 845894 847105 F 1191 95.55 1299 ambiguous_trans 1 ALIGNMENT 736 YS2-17e24.q1k chr02 1152 38 264284 265404 C 1115 90.76 1281 reject_low 12 ALIGNMENT 928 YS2-17e24.q1k chr13 1152 38 188875 189995 C 1115 96.50 1281 ambiguous_trans 3 ALIGNMENT 834 YS2-17e24.q1k chr15 1152 38 122413 123539 C 1115 93.45 1281 reject_low 7 ALIGNMENT 983 YS2-17e24.p1k chr16 27 1217 57937 59145 F 1191 95.63 1299 reject_low 21 ALIGNMENT 793 YS2-17e24.q1k chr10 1152 38 482672 483798 C 1115 92.20 1281 reject_low 8 ALIGNMENT 920 YS2-17e24.p1k chr13 1217 27 360229 361437 C 1191 93.79 1299 reject_low 16 ALIGNMENT 989 YS2-17e24.p1k chr04 1217 27 989946 991154 C 1191 95.72 1299 reject_low 19 ALIGNMENT 992 YS2-17e24.p1k chr10 27 1217 479447 480655 F 1191 95.89 1299 reject_low 8 ALIGNMENT 726 YS2-17e24.q1k chr05 150 1152 492691 493705 F 1003 92.62 1281 reject_low 15 ALIGNMENT 980 YS2-17e24.p1k chr15 27 1217 119188 120396 F 1191 95.55 1299 reject_low 7 ALIGNMENT 963 YS2-17e24.q1k chr16 1152 38 849122 850248 C 1115 97.31 1281 ambiguous_trans 1 ALIGNMENT 989 YS2-17e24.p1k chr16 1217 27 807868 809076 C 1191 95.72 1299 reject_low 20 ALIGNMENT 0 YS2-17e24.q1k chr05 260 62 443393 443392 C 199 0.00 1281 reject_low 29 ALIGNMENT 928 YS2-17e24.q1k chr08 38 1152 543698 544818 F 1115 96.50 1281 ambiguous_trans 2 ALIGNMENT 982 YS2-17e24.p1k chr01 1217 27 163469 164678 C 1191 95.55 1299 reject_low 9 ALIGNMENT 830 YS2-17e24.q1k chr12 38 1152 215169 216295 F 1115 93.36 1281 ambiguous_trans_ua 6 ALIGNMENT 830 YS2-17e24.q1k chr13 38 1152 372784 373910 F 1115 93.36 1281 ambiguous_trans 5 ALIGNMENT 762 YS2-17e24.q1k chr02 1152 38 225747 226867 C 1115 91.48 1281 reject_low 25 ALIGNMENT 765 YS2-17e24.q1k chr13 38 1152 357092 358212 F 1115 91.57 1281 reject_low 16 ALIGNMENT 963 YS2-17e24.q1k chr04 1152 38 1100473 1101599 C 1115 97.31 1281 ambiguous_trans 0 ALIGNMENT 799 YS2-17e24.q1k chr07 1152 38 540475 541601 C 1115 92.38 1281 reject_low 24 ALIGNMENT 0 YS2-17e24.q1k chr05 859 289 443366 443365 C 571 0.00 1281 reject_low 29 ALIGNMENT 989 YS2-17e24.p1k chr08 1217 27 546835 548043 C 1191 95.72 1299 ambiguous_trans 2 ALIGNMENT 995 YS2-17e24.p1k chr14 27 1217 520646 521854 F 1191 95.97 1299 reject_low 17 ALIGNMENT 977 YS2-17e24.p1k chr13 27 1217 197817 199025 F 1191 95.47 1299 reject_low 11 ALIGNMENT 0 YS2-17e24.q1k chr01 288 859 166163 166162 F 572 0.00 1281 reject_low 28 ALIGNMENT 980 YS2-17e24.p1k chr12 1217 27 479205 480413 C 1191 95.47 1299 reject_low 10 ALIGNMENT 983 YS2-17e24.p1k chr07 1217 27 820623 821831 C 1191 95.55 1299 reject_low 14 ALIGNMENT 989 YS2-17e24.p1k chr04 27 1217 1097248 1098456 F 1191 95.80 1299 ambiguous_trans 0 ALIGNMENT 989 YS2-17e24.p1k chr04 1217 27 881525 882733 C 1191 95.72 1299 reject_low 18 ALIGNMENT 754 YS2-17e24.q1k chr12 38 1152 476063 477188 F 1115 91.12 1281 reject_low 10 ALIGNMENT 957 YS2-17e24.q1k chr16 38 1152 850713 851839 F 1115 97.13 1281 ambiguous_trans 4 ALIGNMENT 977 YS2-17e24.p1k chr10 27 1217 473863 475071 F 1191 95.47 1299 reject_low 23 ALIGNMENT 739 YS2-17e24.q1k chr07 38 1152 817486 818606 F 1115 90.85 1281 reject_low 14 ALIGNMENT 21 YS2-17e24.q1k chr05 288 261 443365 443392 C 28 92.86 1281 reject_low 29 ALIGNMENT 989 YS2-17e24.p1k chr13 27 1217 185650 186858 F 1191 95.80 1299 ambiguous_trans 3 ALIGNMENT 992 YS2-17e24.p1k chr13 1217 27 375927 377135 C 1191 95.80 1299 ambiguous_trans 5 ALIGNMENT 989 YS2-17e24.p1k chr02 27 1217 261056 262264 F 1191 95.80 1299 reject_low 12 ALIGNMENT 754 YS2-17e24.q1k chr05 38 1152 443481 444606 F 1115 91.12 1281 reject_low 27 ALIGNMENT 977 YS2-17e24.p1k chr04 1217 27 648724 649932 C 1191 95.38 1299 reject_low 22 ALIGNMENT 986 YS2-17e24.p1k chr15 27 1217 596301 597509 F 1191 95.72 1299 reject_low 13 ALIGNMENT 214 YS2-17f01.q1k vc_7 303 53 4922 5172 C 251 95.22 971|0,1 reject_low 7 ALIGNMENT 49 YS2-17f01.q1k vc_4 304 240 6273 6337 C 65 92.31 971 reject_low 9 ALIGNMENT 265 YS2-17f01.q1k vc_2 1 303 2322 2624 F 303 96.04 971 reject_low 4 ALIGNMENT 48 YS2-17f01.q1k vc_7 54 3 6360 6411 C 52 98.08 971|1,0 reject_low 7 ALIGNMENT 49 YS2-17f01.q1k vc_4 240 304 1550 1614 F 65 92.31 971 reject_low 6 ALIGNMENT 425 YS2-17f01.q1k vc_7 601 1 1962 2569 C 601 90.85 971 reject_low 1 ALIGNMENT 0 YS2-17f01.q1k vc_4 123 239 1550 1549 F 117 0.00 971 reject_low 6 ALIGNMENT 93 YS2-17f01.q1k vc_7 411 305 4593 4699 C 107 96.26 971 reject_low 7 ALIGNMENT 355 YS2-17f01.q1k vc_4 411 1 5242 5654 C 411 95.62 971 reject_low 2 ALIGNMENT 0 YS2-17f01.q1k vc_4 239 123 6338 6337 C 117 0.00 971 reject_low 9 ALIGNMENT 265 YS2-17f01.q1k vc_3 1 303 2689 2991 F 303 96.04 971 reject_low 5 ALIGNMENT 0 YS2-17f01.q1k vc_7 304 304 4700 4921 C 1 0.00 971 reject_low 7 ALIGNMENT 0 YS2-17f01.q1k vc_7 53 54 5172 6360 C 0 0.00 971 reject_low 7 ALIGNMENT 443 YS2-17f01.q1k vc_5 1 655 2556 3219 F 655 89.92 971 reject_vc 0 ALIGNMENT 265 YS2-17f01.q1k vc_1 1 303 2689 2991 F 303 96.04 971 reject_low 3 ALIGNMENT 0 YS2-17f01.q1k vc_4 305 310 1615 1881 F 6 0.00 971 reject_low 6 ALIGNMENT 171 YS2-17f01.q1k vc_4 311 655 1882 2235 F 345 84.64 971 reject_low 6 ALIGNMENT 0 YS2-17f01.q1k vc_4 239 123 111 110 C 117 0.00 971 reject_low 8 ALIGNMENT 49 YS2-17f01.q1k vc_4 304 240 46 110 C 65 92.31 971 reject_low 8 ALIGNMENT 865 YS2-17f03.q1k chr12 46 1027 1028850 1029843 F 982 96.95 1332 accept 0 ALIGNMENT 865 YS2-17f03.p1k chr12 1059 30 1032859 1033896 C 1030 95.73 1454 accept 0 ALIGNMENT 0 YS2-17f03.q1k chr13 440 62 123746 123745 C 379 0.00 1332 reject_low 1 ALIGNMENT 355 YS2-17f03.q1k chr13 959 441 123225 123745 C 519 89.21 1332 reject_low 1 ALIGNMENT 334 YS2-17f05.q1k chr12 385 37 965604 965953 C 349 99.43 425 accept_chi 1 ALIGNMENT 36 YS2-17f05.q1k vc_5 422 387 1 36 C 36 100.00 425 reject_low 8 ALIGNMENT 0 YS2-17f05.q1k vc_7 62 387 13525 13524 F 326 0.00 425 reject_low 7 ALIGNMENT 41 YS2-17f05.q1k vc_4 378 425 5824 5871 F 48 95.83 425 reject_low 5 ALIGNMENT 0 YS2-17f05.q1k vc_4 62 377 5824 5823 F 316 0.00 425 reject_low 5 ALIGNMENT 41 YS2-17f05.q1k vc_2 425 378 2105 2152 C 48 95.83 425 reject_low 3 ALIGNMENT 0 YS2-17f05.q1k vc_5 386 62 5064 5063 C 325 0.00 425 reject_low 6 ALIGNMENT 0 YS2-17f05.p1k chr12 380 396 965953 965952 F 17 0.00 396 accept_chi 0 ALIGNMENT 0 YS2-17f05.q1k vc_5 386 62 37 36 C 325 0.00 425 reject_low 8 ALIGNMENT 333 YS2-17f05.p1k chr12 29 379 965604 965953 F 351 99.15 396 accept_chi 0 ALIGNMENT 0 YS2-17f05.q1k vc_3 377 62 2520 2519 C 316 0.00 425 reject_low 4 ALIGNMENT 0 YS2-17f05.q1k vc_1 377 62 2520 2519 C 316 0.00 425 reject_low 2 ALIGNMENT 41 YS2-17f05.q1k vc_1 425 378 2472 2519 C 48 95.83 425 reject_low 2 ALIGNMENT 41 YS2-17f05.q1k vc_3 425 378 2472 2519 C 48 95.83 425 reject_low 4 ALIGNMENT 39 YS2-17f05.q1k vc_5 425 387 5025 5063 C 39 100.00 425 reject_low 6 ALIGNMENT 0 YS2-17f05.q1k vc_2 377 62 2153 2152 C 316 0.00 425 reject_low 3 ALIGNMENT 0 YS2-17f05.q1k chr12 425 386 965605 965604 C 40 0.00 425 accept_chi 1 ALIGNMENT 38 YS2-17f05.q1k vc_7 388 425 13525 13562 F 38 100.00 425 reject_low 7 ALIGNMENT 878 YS2-17f06.p1k chr11 1024 27 333116 334126 C 998 97.29 1321 accept 0 ALIGNMENT 930 YS2-17f06.q1k chr11 39 1181 330193 331350 F 1143 95.45 1380 accept 0 ALIGNMENT 957 YS2-17f07.q1k chr14 1140 40 237184 238302 C 1101 96.82 1366 accept 0 ALIGNMENT 957 YS2-17f07.p1k chr14 31 1141 233679 234803 F 1111 96.04 1443 accept 0 ALIGNMENT 950 YS2-17f08.q1k chr12 38 1079 453378 454436 F 1042 97.50 1377 accept 0 ALIGNMENT 996 YS2-17f08.p1k chr12 1173 32 464086 465228 C 1142 95.88 1491 accept 1 ALIGNMENT 996 YS2-17f08.p1k chr12 1173 32 454949 456091 C 1142 95.88 1491 accept 0 ALIGNMENT 950 YS2-17f08.q1k chr12 38 1079 462515 463573 F 1042 97.50 1377 accept 1 ALIGNMENT 21 YS2-17f09.q1k vc_5 41 21 2378 2398 C 21 100.00 588 reject_low 8 ALIGNMENT 487 YS2-17f09.p1k chr15 536 30 653979 654487 C 507 99.41 555 accept_chi 1 ALIGNMENT 36 YS2-17f09.q1k vc_5 585 550 1 36 C 36 100.00 588 reject_low 8 ALIGNMENT 495 YS2-17f09.q1k chr15 40 547 653979 654487 F 508 99.80 588 accept_chi 0 ALIGNMENT 41 YS2-17f09.q1k vc_3 588 548 2472 2512 C 41 100.00 588 reject_low 6 ALIGNMENT 0 YS2-17f09.q1k vc_3 547 41 2513 2511 C 507 0.00 588 reject_low 6 ALIGNMENT 0 YS2-17f09.q1k vc_5 549 42 37 2377 C 508 0.00 588 reject_low 8 ALIGNMENT 0 YS2-17f09.q1k vc_7 62 550 13525 13524 F 489 0.00 588 reject_low 3 ALIGNMENT 20 YS2-17f09.q1k vc_4 21 40 5812 5831 F 20 100.00 588 reject_low 7 ALIGNMENT 41 YS2-17f09.q1k vc_4 548 588 5831 5871 F 41 100.00 588 reject_low 7 ALIGNMENT 0 YS2-17f09.q1k vc_4 41 547 5832 5830 F 507 0.00 588 reject_low 7 ALIGNMENT 0 YS2-17f09.q1k vc_1 547 41 2513 2511 C 507 0.00 588 reject_low 4 ALIGNMENT 38 YS2-17f09.q1k vc_7 551 588 13525 13562 F 38 100.00 588 reject_low 3 ALIGNMENT 0 YS2-17f09.q1k vc_2 547 41 2146 2144 C 507 0.00 588 reject_low 5 ALIGNMENT 0 YS2-17f09.q1k chr15 548 588 654487 654486 F 41 0.00 588 accept_chi 0 ALIGNMENT 41 YS2-17f09.q1k vc_1 588 548 2472 2512 C 41 100.00 588 reject_low 4 ALIGNMENT 20 YS2-17f09.q1k vc_1 40 21 2512 2531 C 20 100.00 588 reject_low 4 ALIGNMENT 0 YS2-17f09.p1k chr15 555 537 653980 653979 C 19 0.00 555 accept_chi 1 ALIGNMENT 41 YS2-17f09.q1k vc_2 588 548 2105 2145 C 41 100.00 588 reject_low 5 ALIGNMENT 20 YS2-17f09.q1k vc_2 40 21 2145 2164 C 20 100.00 588 reject_low 5 ALIGNMENT 20 YS2-17f09.q1k vc_3 40 21 2512 2531 C 20 100.00 588 reject_low 6 ALIGNMENT 39 YS2-17f09.q1k vc_5 588 550 5025 5063 C 39 100.00 588 reject_low 2 ALIGNMENT 0 YS2-17f09.q1k vc_5 549 62 5064 5063 C 488 0.00 588 reject_low 2 ALIGNMENT 906 YS2-17f10.p1k chr10 36 1068 368339 369388 F 1033 97.77 1407 accept 0 ALIGNMENT 898 YS2-17f10.q1k chr10 1038 35 371788 372808 C 1004 97.41 1364 accept 0 ALIGNMENT 0 YS2-17f11.q1k vc_1 395 62 2513 2512 C 334 0.00 436 reject_low 2 ALIGNMENT 0 YS2-17f11.q1k vc_3 395 62 2513 2512 C 334 0.00 436 reject_low 3 ALIGNMENT 0 YS2-17f11.q1k vc_7 62 398 13525 13524 F 337 0.00 436 reject_low 6 ALIGNMENT 0 YS2-17f11.q1k vc_5 397 62 5064 5063 C 336 0.00 436 reject_low 5 ALIGNMENT 0 YS2-17f11.p1k chr08 423 441 68417 68416 F 19 0.00 441 accept_chi 0 ALIGNMENT 41 YS2-17f11.q1k vc_3 436 396 2472 2512 C 41 100.00 436 reject_low 3 ALIGNMENT 38 YS2-17f11.q1k vc_7 399 436 13525 13562 F 38 100.00 436 reject_low 6 ALIGNMENT 0 YS2-17f11.q1k chr08 436 396 68052 68051 C 41 0.00 436 accept_chi 1 ALIGNMENT 0 YS2-17f11.q1k vc_4 62 395 5831 5830 F 334 0.00 436 reject_low 4 ALIGNMENT 41 YS2-17f11.q1k vc_4 396 436 5831 5871 F 41 100.00 436 reject_low 4 ALIGNMENT 343 YS2-17f11.p1k chr08 56 422 68051 68417 F 367 98.91 441 accept_chi 0 ALIGNMENT 339 YS2-17f11.q1k chr08 395 30 68051 68417 C 366 98.63 436 accept_chi 1 ALIGNMENT 41 YS2-17f11.q1k vc_1 436 396 2472 2512 C 41 100.00 436 reject_low 2 ALIGNMENT 39 YS2-17f11.q1k vc_5 436 398 5025 5063 C 39 100.00 436 reject_low 5 ALIGNMENT 0 YS2-17f11.q1k vc_5 397 62 37 36 C 336 0.00 436 reject_low 7 ALIGNMENT 36 YS2-17f11.q1k vc_5 433 398 1 36 C 36 100.00 436 reject_low 7 ALIGNMENT 879 YS2-17f12.q1k chr02 30 1045 590824 591859 F 1016 96.75 1332 accept 0 ALIGNMENT 900 YS2-17f12.p1k chr02 1070 26 595051 596105 C 1045 96.56 1376 accept 0 ALIGNMENT 73 YS2-17f12.q1k chr16 906 1045 377288 377440 F 140 87.14 1332 reject_low 1 ALIGNMENT 0 YS2-17f12.q1k chr16 62 905 377288 377287 F 844 0.00 1332 reject_low 1 ALIGNMENT 824 YS2-17f13.p1k chr07 1066 56 673148 674167 C 1011 94.66 1192 accept_chi 1 ALIGNMENT 995 YS2-17f13.q1k chr16 1185 39 631484 632647 C 1147 96.86 1351 accept_chi 0 ALIGNMENT 518 YS2-17f14.p1k chr04 672 1 1211343 1212022 C 672 93.90 1003 reject_low 17 ALIGNMENT 358 YS2-17f14.q1k chr10 166 1002 481724 482559 F 837 82.68 1427 reject_low 24 ALIGNMENT 0 YS2-17f14.q1k chr16 165 62 852788 852787 C 104 0.00 1427 reject_low 26 ALIGNMENT 589 YS2-17f14.p1k chr02 728 1 34272 35012 C 728 94.64 1003 ambiguous_trans 10 ALIGNMENT 970 YS2-17f14.q1k chr04 38 1219 875490 876681 F 1182 95.09 1427 ambiguous_trans 5 ALIGNMENT 979 YS2-17f14.q1k chr12 1219 38 976831 978022 C 1182 95.35 1427 reject_low 13 ALIGNMENT 970 YS2-17f14.q1k chr12 38 1219 944863 946054 F 1182 95.09 1427 ambiguous_trans 4 ALIGNMENT 602 YS2-17f14.p1k chr15 747 1 974890 975653 C 747 94.65 1003 ambiguous_trans 0 ALIGNMENT 476 YS2-17f14.q1k chr14 166 1209 522905 523956 F 1044 83.14 1427 reject_low 11 ALIGNMENT 0 YS2-17f14.q1k chr13 62 165 200094 200093 F 104 0.00 1427 reject_low 18 ALIGNMENT 0 YS2-17f14.q1k chr16 165 62 806800 806799 C 104 0.00 1427 reject_low 12 ALIGNMENT 0 YS2-17f14.q1k chr13 62 165 187927 187926 F 104 0.00 1427 reject_low 16 ALIGNMENT 0 YS2-17f14.q1k chr14 62 165 522905 522904 F 104 0.00 1427 reject_low 11 ALIGNMENT 455 YS2-17f14.q1k chr16 166 1209 848174 849225 F 1044 82.47 1427 reject_low 25 ALIGNMENT 369 YS2-17f14.q1k chr13 1128 166 358198 359160 C 963 80.48 1427 reject_low 31 ALIGNMENT 431 YS2-17f14.q1k chr15 166 1128 121465 122427 F 963 82.66 1427 reject_low 30 ALIGNMENT 0 YS2-17f14.q1k chr15 62 165 121465 121464 F 104 0.00 1427 reject_low 30 ALIGNMENT 0 YS2-17f14.q1k chr13 165 62 374859 374858 C 104 0.00 1427 reject_low 28 ALIGNMENT 430 YS2-17f14.p1k chr13 728 1 200923 201663 C 728 87.64 1003 reject_low 18 ALIGNMENT 595 YS2-17f14.p1k chr04 1 728 514272 515012 F 728 94.78 1003 ambiguous_trans 9 ALIGNMENT 518 YS2-17f14.p1k chr12 672 1 655477 656156 C 672 93.90 1003 reject_low 23 ALIGNMENT 376 YS2-17f14.q1k chr04 166 1128 1210453 1211415 F 963 80.69 1427 reject_low 17 ALIGNMENT 473 YS2-17f14.p1k chr10 691 1 477010 477709 C 691 90.88 1003 reject_low 15 ALIGNMENT 535 YS2-17f14.p1k chr16 1 728 805230 805970 F 728 92.45 1003 reject_low 12 ALIGNMENT 577 YS2-17f14.p1k chr04 1 728 878887 879627 F 728 93.96 1003 reject_low 20 ALIGNMENT 958 YS2-17f14.q1k chr15 1219 38 705158 706349 C 1182 94.75 1427 ambiguous_trans 7 ALIGNMENT 979 YS2-17f14.q1k chr15 38 1219 973956 975147 F 1182 95.35 1427 ambiguous_trans 0 ALIGNMENT 447 YS2-17f14.q1k chr16 1209 166 851736 852787 C 1044 82.09 1427 reject_low 26 ALIGNMENT 442 YS2-17f14.q1k chr05 1211 166 493599 494653 C 1046 81.93 1427 reject_low 27 ALIGNMENT 587 YS2-17f14.p1k chr12 747 1 945797 946560 C 747 93.98 1003 ambiguous_trans 4 ALIGNMENT 976 YS2-17f14.q1k chr04 38 1219 984839 986030 F 1182 95.26 1427 reject_low 14 ALIGNMENT 453 YS2-17f14.q1k chr16 1209 166 805748 806799 C 1044 82.28 1427 reject_low 12 ALIGNMENT 0 YS2-17f14.q1k chr04 62 165 1210453 1210452 F 104 0.00 1427 reject_low 17 ALIGNMENT 455 YS2-17f14.q1k chr13 166 1209 187927 188978 F 1044 82.47 1427 reject_low 16 ALIGNMENT 0 YS2-17f14.q1k chr10 62 165 481724 481723 F 104 0.00 1427 reject_low 24 ALIGNMENT 443 YS2-17f14.q1k chr10 166 1209 476140 477191 F 1044 82.09 1427 reject_low 15 ALIGNMENT 442 YS2-17f14.q1k chr13 1211 166 373804 374858 C 1046 81.93 1427 reject_low 28 ALIGNMENT 973 YS2-17f14.q1k chr07 38 1219 815126 816317 F 1182 95.18 1427 ambiguous_trans 3 ALIGNMENT 592 YS2-17f14.p1k chr03 728 1 89441 90181 C 728 94.78 1003 ambiguous_trans 6 ALIGNMENT 961 YS2-17f14.q1k chr14 1219 38 563127 564318 C 1182 94.84 1427 ambiguous_trans 8 ALIGNMENT 593 YS2-17f14.p1k chr07 1 747 569332 570095 F 747 94.11 1003 ambiguous_trans 2 ALIGNMENT 600 YS2-17f14.p1k chr04 723 1 876453 877187 C 723 95.30 1003 ambiguous_trans 5 ALIGNMENT 598 YS2-17f14.p1k chr04 1 728 646086 646826 F 728 94.92 1003 reject_low 19 ALIGNMENT 0 YS2-17f14.q1k chr16 62 165 848174 848173 F 104 0.00 1427 reject_low 25 ALIGNMENT 0 YS2-17f14.q1k chr13 165 62 359161 359160 C 104 0.00 1427 reject_low 31 ALIGNMENT 0 YS2-17f14.q1k chr05 165 62 445555 445554 C 104 0.00 1427 reject_low 29 ALIGNMENT 973 YS2-17f14.q1k chr07 1219 38 569838 571029 C 1182 95.18 1427 ambiguous_trans 2 ALIGNMENT 456 YS2-17f14.p1k chr13 697 1 188791 189496 C 697 89.67 1003 reject_low 16 ALIGNMENT 589 YS2-17f14.p1k chr14 1 728 562621 563361 F 728 94.51 1003 ambiguous_trans 8 ALIGNMENT 434 YS2-17f14.q1k chr13 166 1209 200094 201145 F 1044 81.70 1427 reject_low 18 ALIGNMENT 0 YS2-17f14.q1k chr05 165 62 494654 494653 C 104 0.00 1427 reject_low 27 ALIGNMENT 535 YS2-17f14.p1k chr12 728 1 597735 598475 C 728 92.45 1003 reject_low 22 ALIGNMENT 967 YS2-17f14.q1k chr03 38 1219 88484 89675 F 1182 95.01 1427 ambiguous_trans 6 ALIGNMENT 940 YS2-17f14.q1k chr02 38 1211 33315 34497 F 1174 94.38 1427 ambiguous_trans 10 ALIGNMENT 593 YS2-17f14.p1k chr07 747 1 816060 816823 C 747 94.24 1003 ambiguous_trans 3 ALIGNMENT 943 YS2-17f14.q1k chr04 1219 38 514778 515969 C 1182 94.33 1427 ambiguous_trans 9 ALIGNMENT 0 YS2-17f14.q1k chr10 62 165 476140 476139 F 104 0.00 1427 reject_low 15 ALIGNMENT 600 YS2-17f14.p1k chr15 1 723 704652 705386 F 723 95.16 1003 ambiguous_trans 7 ALIGNMENT 222 YS2-17f14.p1k chr10 672 159 482614 483135 C 514 82.49 1003 reject_low 24 ALIGNMENT 535 YS2-17f14.p1k chr07 1 728 562436 563176 F 728 92.45 1003 reject_low 21 ALIGNMENT 0 YS2-17f14.p1k chr10 158 62 483136 483135 C 97 0.00 1003 reject_low 24 ALIGNMENT 565 YS2-17f14.p1k chr14 728 1 523734 524474 C 728 93.54 1003 reject_low 11 ALIGNMENT 434 YS2-17f14.q1k chr05 1209 166 444503 445554 C 1044 81.61 1427 reject_low 29 ALIGNMENT 593 YS2-17f14.p1k chr06 747 1 142516 143279 C 747 94.24 1003 ambiguous_trans 1 ALIGNMENT 973 YS2-17f14.q1k chr06 38 1219 141582 142773 F 1182 95.18 1427 ambiguous_trans 1 ALIGNMENT 75 YS2-17f15.q1k vc_1 1044 1167 2531 2660 F 124 85.48 1428 reject_low 3 ALIGNMENT 0 YS2-17f15.q1k vc_4 1043 62 5813 5812 C 982 0.00 1428 reject_low 6 ALIGNMENT 49 YS2-17f15.q1k vc_4 1128 1044 1446 1534 C 85 84.71 1428 reject_low 9 ALIGNMENT 72 YS2-17f15.p1k vc_4 1028 1178 5871 6034 F 151 84.11 1446 reject_low 1 ALIGNMENT 0 YS2-17f15.q1k vc_5 1005 62 5064 5063 C 944 0.00 1428 reject_low 12 ALIGNMENT 0 YS2-17f15.q1k vc_1 1003 62 2513 2512 C 942 0.00 1428 reject_low 10 ALIGNMENT 29 YS2-17f15.q1k vc_7 1007 1044 13525 13562 F 38 94.74 1428 reject_low 13 ALIGNMENT 75 YS2-17f15.q1k vc_4 1044 1167 126 255 F 124 85.48 1428 reject_low 5 ALIGNMENT 0 YS2-17f15.q1k vc_7 62 1006 13525 13524 F 945 0.00 1428 reject_low 13 ALIGNMENT 0 YS2-17f15.q1k vc_4 62 1003 5831 5830 F 942 0.00 1428 reject_low 8 ALIGNMENT 0 YS2-17f15.q1k vc_3 62 1043 2531 2530 F 982 0.00 1428 reject_low 4 ALIGNMENT 75 YS2-17f15.q1k vc_5 1044 1167 2398 2527 F 124 85.48 1428 reject_low 7 ALIGNMENT 72 YS2-17f15.p1k vc_7 1028 1178 13562 13725 F 151 84.11 1446 reject_low 2 ALIGNMENT 75 YS2-17f15.q1k vc_4 1167 1044 5683 5812 C 124 85.48 1428 reject_low 6 ALIGNMENT 0 YS2-17f15.p1k vc_4 77 1027 5871 5870 F 951 0.00 1446 reject_low 1 ALIGNMENT 27 YS2-17f15.q1k vc_5 1041 1006 1 36 C 36 94.44 1428 reject_low 14 ALIGNMENT 0 YS2-17f15.p1k vc_7 77 1027 13562 13561 F 951 0.00 1446 reject_low 2 ALIGNMENT 924 YS2-17f15.p1k chr09 1007 58 237887 238836 C 950 99.58 1446 accept 0 ALIGNMENT 32 YS2-17f15.q1k vc_3 1044 1004 2472 2512 C 41 95.12 1428 reject_low 11 ALIGNMENT 0 YS2-17f15.q1k vc_4 62 1043 126 125 F 982 0.00 1428 reject_low 5 ALIGNMENT 75 YS2-17f15.q1k vc_3 1044 1167 2531 2660 F 124 85.48 1428 reject_low 4 ALIGNMENT 0 YS2-17f15.q1k vc_5 62 1043 2398 2397 F 982 0.00 1428 reject_low 7 ALIGNMENT 0 YS2-17f15.q1k vc_5 1005 62 37 36 C 944 0.00 1428 reject_low 14 ALIGNMENT 0 YS2-17f15.q1k vc_4 1045 1044 5872 6353 F 0 0.00 1428 reject_low 8 ALIGNMENT 0 YS2-17f15.q1k vc_3 1003 62 2513 2512 C 942 0.00 1428 reject_low 11 ALIGNMENT 909 YS2-17f15.q1k chr09 52 1004 237885 238839 F 953 99.16 1428 accept 0 ALIGNMENT 32 YS2-17f15.q1k vc_4 1004 1044 5831 5871 F 41 95.12 1428 reject_low 8 ALIGNMENT 30 YS2-17f15.q1k vc_5 1044 1006 5025 5063 C 39 94.87 1428 reject_low 12 ALIGNMENT 0 YS2-17f15.q1k vc_1 62 1043 2531 2530 F 982 0.00 1428 reject_low 3 ALIGNMENT 0 YS2-17f15.q1k vc_4 1043 62 1535 1534 C 982 0.00 1428 reject_low 9 ALIGNMENT 32 YS2-17f15.q1k vc_1 1044 1004 2472 2512 C 41 95.12 1428 reject_low 10 ALIGNMENT 75 YS2-17f15.q1k vc_4 1044 1167 6353 6482 F 124 85.48 1428|1,0 reject_low 8 ALIGNMENT 26 YS2-17f16.p1k vc_1 878 848 2441 2472 C 31 96.77 1351 reject_low 8 ALIGNMENT 0 YS2-17f16.p1k vc_7 62 847 13562 13561 F 786 0.00 1351 reject_low 7 ALIGNMENT 0 YS2-17f16.p1k vc_7 62 847 100 99 F 786 0.00 1351 reject_low 6 ALIGNMENT 0 YS2-17f16.p1k vc_3 847 62 2106 2105 C 786 0.00 1351 reject_low 3 ALIGNMENT 0 YS2-17f16.p1k vc_1 847 62 2473 2472 C 786 0.00 1351 reject_low 8 ALIGNMENT 0 YS2-17f16.p1k vc_2 847 62 2106 2105 C 786 0.00 1351 reject_low 2 ALIGNMENT 153 YS2-17f16.p1k vc_7 848 1069 13562 13794 F 222 91.44 1351 reject_low 7 ALIGNMENT 153 YS2-17f16.p1k vc_5 1069 848 4793 5025 C 222 91.44 1351 reject_low 5 ALIGNMENT 777 YS2-17f16.q1k chr04 837 40 1066889 1067687 C 798 99.87 837 accept 0 ALIGNMENT 26 YS2-17f16.p1k vc_3 878 848 2441 2472 C 31 96.77 1351 reject_low 9 ALIGNMENT 0 YS2-17f16.p1k vc_5 847 62 5026 5025 C 786 0.00 1351 reject_low 5 ALIGNMENT 153 YS2-17f16.p1k vc_1 1069 848 1873 2105 C 222 91.44 1351 reject_low 1 ALIGNMENT 153 YS2-17f16.p1k vc_4 848 1069 5871 6103 F 222 91.44 1351 reject_low 4 ALIGNMENT 0 YS2-17f16.p1k vc_1 847 62 2106 2105 C 786 0.00 1351 reject_low 1 ALIGNMENT 153 YS2-17f16.p1k vc_7 848 1069 100 332 F 222 91.44 1351 reject_low 6 ALIGNMENT 0 YS2-17f16.p1k vc_4 62 847 5871 5870 F 786 0.00 1351 reject_low 4 ALIGNMENT 153 YS2-17f16.p1k vc_3 1069 848 1873 2105 C 222 91.44 1351 reject_low 3 ALIGNMENT 778 YS2-17f16.p1k chr04 30 829 1066888 1067687 F 800 99.50 1351 accept 0 ALIGNMENT 0 YS2-17f16.p1k vc_3 847 62 2473 2472 C 786 0.00 1351 reject_low 9 ALIGNMENT 153 YS2-17f16.p1k vc_2 1069 848 1873 2105 C 222 91.44 1351 reject_low 2 ALIGNMENT 73 YS2-17f17.p1k chr04 515 611 221707 221803 F 97 95.88 1377 reject_low 1 ALIGNMENT 926 YS2-17f17.q1k chr04 1143 31 227490 228605 C 1113 94.70 1424 reject_low 1 ALIGNMENT 0 YS2-17f17.p1k chr04 62 514 221707 221706 F 453 0.00 1377 reject_low 1 ALIGNMENT 927 YS2-17f17.p1k chr04 28 1079 129903 130960 F 1052 96.96 1377 accept 0 ALIGNMENT 1082 YS2-17f17.q1k chr04 1256 31 133377 134608 C 1226 96.66 1424 accept 0 ALIGNMENT 0 YS2-17f17.p1k chr04 612 930 221803 221802 F 319 0.00 1377 reject_low 1 ALIGNMENT 917 YS2-17f18.p1k chr10 30 1079 306346 307400 F 1050 96.29 1379 accept 0 ALIGNMENT 906 YS2-17f18.q1k chr10 1067 42 309291 310331 C 1026 97.37 1338 accept 0 ALIGNMENT 0 YS2-17f19.q1k chr02 916 818 574695 574694 C 99 0.00 1372 reject_low 1 ALIGNMENT 226 YS2-17f19.q1k chr02 817 38 574694 575473 C 780 76.67 1372 reject_low 1 ALIGNMENT 1011 YS2-17f19.q1k chr16 1188 38 350593 351754 C 1151 96.52 1372 accept 0 ALIGNMENT 1004 YS2-17f19.p1k chr16 30 1198 345951 347123 F 1169 96.24 1407 accept 0 ALIGNMENT 908 YS2-17f20.q1k chr04 1070 54 455938 456964 C 1017 97.84 1331 accept 0 ALIGNMENT 946 YS2-17f20.p1k chr04 33 1094 453251 454313 F 1062 97.55 1337 accept 0 ALIGNMENT 355 YS2-17f21.q1k chr07 713 190 569487 570007 C 524 91.03 1048 ambiguous_trans 4 ALIGNMENT 322 YS2-17f21.q1k chr14 190 713 523799 524319 F 524 89.12 1048 ambiguous_trans 13 ALIGNMENT 323 YS2-17f21.q1k chr04 190 580 985861 986249 F 391 95.65 1048 ambiguous_trans 15 ALIGNMENT 355 YS2-17f21.q1k chr15 190 713 974978 975498 F 524 91.22 1048 ambiguous_trans 7 ALIGNMENT 355 YS2-17f21.q1k chr03 190 713 89506 90026 F 524 91.22 1048 ambiguous_trans 0 ALIGNMENT 294 YS2-17f21.q1k chr16 712 190 805386 805905 C 523 87.19 1048 ambiguous_trans 17 ALIGNMENT 200 YS2-17f21.q1k chr12 411 190 976780 977000 C 222 99.10 1048 reject_low 22 ALIGNMENT 355 YS2-17f21.q1k chr04 190 713 876512 877032 F 524 91.22 1048 ambiguous_trans 2 ALIGNMENT 286 YS2-17f21.q1k chr16 190 710 849068 849585 F 521 86.95 1048 ambiguous_trans 19 ALIGNMENT 282 YS2-17f21.q1k chr05 668 190 444185 444660 C 479 88.31 1048 ambiguous_trans 21 ALIGNMENT 349 YS2-17f21.q1k chr12 190 713 945885 946405 F 524 90.84 1048 ambiguous_trans 11 ALIGNMENT 295 YS2-17f21.q1k chr07 713 190 562591 563111 C 524 87.21 1048 ambiguous_trans 16 ALIGNMENT 355 YS2-17f21.q1k chr15 713 190 704807 705327 C 524 91.03 1048 ambiguous_trans 6 ALIGNMENT 355 YS2-17f21.q1k chr06 190 713 142604 143124 F 524 91.22 1048 ambiguous_trans 3 ALIGNMENT 355 YS2-17f21.q1k chr04 713 190 514427 514947 C 524 91.03 1048 ambiguous_trans 1 ALIGNMENT 354 YS2-17f21.q1k chr04 712 190 646242 646761 C 523 91.01 1048 ambiguous_trans 8 ALIGNMENT 286 YS2-17f21.q1k chr13 190 710 188821 189338 F 521 86.95 1048 ambiguous_trans 18 ALIGNMENT 349 YS2-17f21.q1k chr02 190 713 34337 34857 F 524 90.84 1048 ambiguous_trans 10 ALIGNMENT 286 YS2-17f21.q1k chr16 710 190 851376 851893 C 521 86.76 1048 ambiguous_trans 20 ALIGNMENT 355 YS2-17f21.q1k chr07 190 713 816148 816668 F 524 91.22 1048 ambiguous_trans 5 ALIGNMENT 315 YS2-17f21.q1k chr01 668 190 161031 161506 C 479 90.61 1048 ambiguous_trans 14 ALIGNMENT 334 YS2-17f21.q1k chr04 713 190 879042 879562 C 524 89.69 1048 ambiguous_trans 12 ALIGNMENT 352 YS2-17f21.q1k chr14 713 190 562776 563296 C 524 90.84 1048 ambiguous_trans 9 ALIGNMENT 0 YS2-17f22.p1k chr12 335 538 490543 490542 F 204 0.00 1343 reject_low 2 ALIGNMENT 845 YS2-17f22.q1k chr12 1012 33 453419 454418 C 980 96.33 1316 accept 0 ALIGNMENT 761 YS2-17f22.p1k chr12 31 992 461412 462358 F 962 94.39 1343 reject_low 1 ALIGNMENT 282 YS2-17f22.p1k chr12 31 334 490243 490543 F 304 98.36 1343 reject_low 2 ALIGNMENT 838 YS2-17f22.q1k chr12 973 33 462599 463555 C 941 97.13 1316 reject_low 1 ALIGNMENT 761 YS2-17f22.p1k chr12 31 992 452275 453221 F 962 94.39 1343 accept 0 ALIGNMENT 0 YS2-17f23.q1k vc_5 255 62 5064 5063 C 194 0.00 294 reject_low 5 ALIGNMENT 0 YS2-17f23.q1k vc_1 254 62 2512 2511 C 193 0.00 294 reject_low 2 ALIGNMENT 0 YS2-17f23.q1k vc_3 254 62 2512 2511 C 193 0.00 294 reject_low 3 ALIGNMENT 0 YS2-17f23.q1k vc_5 255 62 37 36 C 194 0.00 294 reject_low 7 ALIGNMENT 0 YS2-17f23.q1k chr07 294 255 1003193 1003192 C 40 0.00 294 accept_chi 1 ALIGNMENT 0 YS2-17f23.p1k chr07 258 274 1003424 1003423 F 17 0.00 274 accept_chi 0 ALIGNMENT 225 YS2-17f23.p1k chr07 26 257 1003192 1003424 F 232 99.14 274 accept_chi 0 ALIGNMENT 0 YS2-17f23.q1k vc_7 62 256 13525 13524 F 195 0.00 294 reject_low 6 ALIGNMENT 39 YS2-17f23.q1k vc_5 294 256 5025 5063 C 39 100.00 294 reject_low 5 ALIGNMENT 40 YS2-17f23.q1k vc_4 255 294 5832 5871 F 40 100.00 294 reject_low 4 ALIGNMENT 36 YS2-17f23.q1k vc_5 291 256 1 36 C 36 100.00 294 reject_low 7 ALIGNMENT 40 YS2-17f23.q1k vc_3 294 255 2472 2511 C 40 100.00 294 reject_low 3 ALIGNMENT 38 YS2-17f23.q1k vc_7 257 294 13525 13562 F 38 100.00 294 reject_low 6 ALIGNMENT 220 YS2-17f23.q1k chr07 254 27 1003192 1003421 C 228 99.12 294 accept_chi 1 ALIGNMENT 40 YS2-17f23.q1k vc_1 294 255 2472 2511 C 40 100.00 294 reject_low 2 ALIGNMENT 0 YS2-17f23.q1k vc_4 62 254 5832 5831 F 193 0.00 294 reject_low 4 ALIGNMENT 188 YS2-17f24.p1k chr04 462 185 457147 457410 C 278 92.81 1087 accept 0 ALIGNMENT 936 YS2-17f24.q1k chr04 39 1153 452031 453130 F 1115 96.23 1354 accept 0 ALIGNMENT 974 YS2-17g01.q1k chr15 49 1149 555629 556740 F 1101 97.55 1300 accept 0 ALIGNMENT 1005 YS2-17g01.p1k chr15 1282 62 557620 558853 C 1221 95.00 1416 accept 0 ALIGNMENT 999 YS2-17g03.q1k chr15 1132 44 298319 299411 C 1089 97.80 1339 accept 0 ALIGNMENT 896 YS2-17g03.p1k chr15 30 1022 294682 295688 F 993 97.78 1306 accept 0 ALIGNMENT 891 YS2-17g04.p1k chr07 30 1048 952785 953817 F 1019 96.86 1360 accept 0 ALIGNMENT 913 YS2-17g04.q1k chr07 1137 38 953153 954264 C 1100 95.18 1360 accept 0 ALIGNMENT 40 YS2-17g06.q1k vc_3 430 391 2472 2511 C 40 100.00 430 reject_low 3 ALIGNMENT 0 YS2-17g06.q1k chr08 430 388 18743 18742 C 43 0.00 430 ambiguous_tel 0 ALIGNMENT 40 YS2-17g06.q1k vc_4 391 430 5832 5871 F 40 100.00 430 reject_low 4 ALIGNMENT 320 YS2-17g06.p1k chr08 30 388 18742 19101 F 359 97.77 406 ambiguous_tel 1 ALIGNMENT 0 YS2-17g06.p1k chr08 389 406 19101 19100 F 18 0.00 406 ambiguous_tel 1 ALIGNMENT 0 YS2-17g06.q1k vc_7 62 392 13525 13524 F 331 0.00 430 reject_low 6 ALIGNMENT 0 YS2-17g06.q1k vc_5 391 62 37 36 C 330 0.00 430 reject_low 7 ALIGNMENT 38 YS2-17g06.q1k vc_7 393 430 13525 13562 F 38 100.00 430 reject_low 6 ALIGNMENT 0 YS2-17g06.q1k vc_5 391 62 5064 5063 C 330 0.00 430 reject_low 5 ALIGNMENT 0 YS2-17g06.q1k vc_4 62 390 5832 5831 F 329 0.00 430 reject_low 4 ALIGNMENT 36 YS2-17g06.q1k vc_5 427 392 1 36 C 36 100.00 430 reject_low 7 ALIGNMENT 39 YS2-17g06.q1k vc_5 430 392 5025 5063 C 39 100.00 430 reject_low 5 ALIGNMENT 0 YS2-17g06.q1k vc_1 390 62 2512 2511 C 329 0.00 430 reject_low 2 ALIGNMENT 0 YS2-17g06.q1k vc_3 390 62 2512 2511 C 329 0.00 430 reject_low 3 ALIGNMENT 40 YS2-17g06.q1k vc_1 430 391 2472 2511 C 40 100.00 430 reject_low 2 ALIGNMENT 323 YS2-17g06.q1k chr08 387 34 18742 19095 C 354 98.31 430 ambiguous_tel 0 ALIGNMENT 945 YS2-17g07.p1k chr11 65 1135 498988 500064 F 1071 97.01 1415 accept 0 ALIGNMENT 987 YS2-17g07.q1k chr11 1189 46 499615 500758 C 1144 96.68 1385 accept 0 ALIGNMENT 227 YS2-17g08.q1k chrm 349 39 69834 70144 C 311 100.00 390 accept_chi 0 ALIGNMENT 0 YS2-17g08.p1k chrm 340 358 70144 70143 F 19 0.00 358 accept_chi 1 ALIGNMENT 0 YS2-17g08.q1k chrm 390 350 69835 69834 C 41 0.00 390 accept_chi 0 ALIGNMENT 221 YS2-17g08.p1k chrm 34 339 69838 70144 F 306 99.67 358 accept_chi 1 ALIGNMENT 0 YS2-17g09.q1k chr12 921 163 461948 461947 C 759 0.00 1334 reject_low 2 ALIGNMENT 0 YS2-17g09.q1k chr12 159 62 608691 608690 C 98 0.00 1334 accept 0 ALIGNMENT 121 YS2-17g09.q1k chr12 162 38 452810 452935 C 125 99.20 1334 reject_low 1 ALIGNMENT 121 YS2-17g09.q1k chr12 162 38 461947 462072 C 125 99.20 1334 reject_low 2 ALIGNMENT 0 YS2-17g09.p1k chr04 889 506 884319 884318 C 384 0.00 1279 reject_low 3 ALIGNMENT 175 YS2-17g09.p1k chr04 505 319 884318 884504 C 187 98.40 1279 reject_low 3 ALIGNMENT 828 YS2-17g09.q1k chr12 1147 160 607687 608690 C 988 96.05 1334 accept 0 ALIGNMENT 819 YS2-17g09.p1k chr12 28 950 605000 605929 F 923 97.62 1279 accept 0 ALIGNMENT 0 YS2-17g09.p1k chr04 318 62 884505 884504 C 257 0.00 1279 reject_low 3 ALIGNMENT 0 YS2-17g09.q1k chr12 921 163 452811 452810 C 759 0.00 1334 reject_low 1 ALIGNMENT 918 YS2-17g10.p1k chr09 1048 25 273065 274106 C 1024 97.27 1353 accept 0 ALIGNMENT 958 YS2-17g10.q1k chr09 35 1102 272305 273377 F 1068 98.03 1414 accept 0 ALIGNMENT 881 YS2-17g11.p1k chr12 62 1072 845719 846738 F 1011 96.74 1392 accept 0 ALIGNMENT 941 YS2-17g11.q1k chr12 1109 39 849419 850504 C 1071 97.01 1354 accept 0 ALIGNMENT 917 YS2-17g12.p1k chr02 1197 29 622530 623705 C 1169 94.70 1522 accept 0 ALIGNMENT 902 YS2-17g12.q1k chr02 30 1087 618604 619672 F 1058 95.84 1439 accept 0 ALIGNMENT 42 YS2-17g13.q1k vc_5 837 795 5025 5067 C 43 97.67 1336 reject_low 11 ALIGNMENT 145 YS2-17g13.q1k vc_4 837 998 6353 6514 F 162 96.91 1336|1,0 reject_low 9 ALIGNMENT 0 YS2-17g13.q1k vc_4 836 62 1535 1534 C 775 0.00 1336 reject_low 10 ALIGNMENT 0 YS2-17g13.q1k vc_5 794 62 41 40 C 733 0.00 1336 reject_low 15 ALIGNMENT 0 YS2-17g13.q1k vc_7 62 799 13525 13524 F 738 0.00 1336 reject_low 16 ALIGNMENT 0 YS2-17g13.q1k vc_5 880 835 2 1 C 46 0.00 1336 reject_low 15 ALIGNMENT 0 YS2-17g13.q1k vc_5 880 838 5026 5025 C 43 0.00 1336 reject_low 11 ALIGNMENT 40 YS2-17g13.q1k vc_3 837 797 2472 2512 C 41 97.56 1336 reject_low 14 ALIGNMENT 0 YS2-17g13.q1k vc_4 838 837 5872 6353 F 0 0.00 1336 reject_low 9 ALIGNMENT 0 YS2-17g13.q1k chr15 880 797 473895 473894 C 84 0.00 1336 accept_chi 0 ALIGNMENT 40 YS2-17g13.q1k vc_2 837 797 2105 2145 C 41 97.56 1336 reject_low 13 ALIGNMENT 0 YS2-17g13.p1k chr15 797 814 474661 474660 F 18 0.00 814 accept_chi 1 ALIGNMENT 0 YS2-17g13.q1k vc_7 836 62 2728 2727 C 775 0.00 1336 reject_low 6 ALIGNMENT 0 YS2-17g13.q1k vc_3 880 838 2473 2472 C 43 0.00 1336 reject_low 14 ALIGNMENT 247 YS2-17g13.q1k vc_7 1182 837 2380 2727 C 346 91.62 1336 reject_low 6 ALIGNMENT 0 YS2-17g13.q1k vc_1 796 62 2513 2512 C 735 0.00 1336 reject_low 12 ALIGNMENT 0 YS2-17g13.q1k vc_5 62 836 2398 2397 F 775 0.00 1336 reject_low 5 ALIGNMENT 145 YS2-17g13.q1k vc_4 837 998 126 287 F 162 96.91 1336 reject_low 8 ALIGNMENT 0 YS2-17g13.q1k vc_4 62 796 5831 5830 F 735 0.00 1336 reject_low 9 ALIGNMENT 0 YS2-17g13.q1k vc_5 794 62 5068 5067 C 733 0.00 1336 reject_low 11 ALIGNMENT 39 YS2-17g13.q1k vc_5 834 795 1 40 C 40 97.50 1336 reject_low 15 ALIGNMENT 0 YS2-17g13.q1k vc_4 62 836 126 125 F 775 0.00 1336 reject_low 8 ALIGNMENT 0 YS2-17g13.q1k vc_7 838 880 13562 13561 F 43 0.00 1336 reject_low 16 ALIGNMENT 247 YS2-17g13.q1k vc_1 837 1182 2531 2878 F 346 91.33 1336 reject_low 2 ALIGNMENT 0 YS2-17g13.q1k vc_4 836 62 5813 5812 C 775 0.00 1336 reject_low 7 ALIGNMENT 0 YS2-17g13.q1k vc_3 62 836 2531 2530 F 775 0.00 1336 reject_low 4 ALIGNMENT 0 YS2-17g13.q1k vc_1 880 838 2473 2472 C 43 0.00 1336 reject_low 12 ALIGNMENT 81 YS2-17g13.q1k vc_4 918 837 1453 1534 C 82 100.00 1336 reject_low 10 ALIGNMENT 728 YS2-17g13.q1k chr15 796 34 473894 474656 C 763 99.61 1336 accept_chi 0 ALIGNMENT 0 YS2-17g13.q1k vc_2 880 838 2106 2105 C 43 0.00 1336 reject_low 13 ALIGNMENT 247 YS2-17g13.q1k vc_2 837 1182 2164 2511 F 346 91.33 1336 reject_low 3 ALIGNMENT 240 YS2-17g13.q1k vc_4 1182 837 5463 5812 C 346 91.04 1336 reject_low 7 ALIGNMENT 40 YS2-17g13.q1k vc_1 837 797 2472 2512 C 41 97.56 1336 reject_low 12 ALIGNMENT 0 YS2-17g13.q1k vc_2 62 836 2164 2163 F 775 0.00 1336 reject_low 3 ALIGNMENT 247 YS2-17g13.q1k vc_5 837 1182 2398 2745 F 346 91.33 1336 reject_low 5 ALIGNMENT 38 YS2-17g13.q1k vc_7 800 837 13525 13562 F 38 100.00 1336 reject_low 16 ALIGNMENT 723 YS2-17g13.p1k chr15 30 796 473894 474661 F 767 99.22 814 accept_chi 1 ALIGNMENT 247 YS2-17g13.q1k vc_3 837 1182 2531 2878 F 346 91.33 1336 reject_low 4 ALIGNMENT 0 YS2-17g13.q1k vc_2 796 62 2146 2145 C 735 0.00 1336 reject_low 13 ALIGNMENT 0 YS2-17g13.q1k vc_3 796 62 2513 2512 C 735 0.00 1336 reject_low 14 ALIGNMENT 0 YS2-17g13.q1k vc_1 62 836 2531 2530 F 775 0.00 1336 reject_low 2 ALIGNMENT 40 YS2-17g13.q1k vc_4 797 837 5831 5871 F 41 97.56 1336 reject_low 9 ALIGNMENT 995 YS2-17g16.p1k chr04 1191 29 266720 267897 C 1163 96.30 1408 accept 0 ALIGNMENT 968 YS2-17g16.q1k chr04 29 1130 265413 266531 F 1102 96.55 1372 accept 0 ALIGNMENT 967 YS2-17g17.q1k chr12 38 1200 396675 397850 F 1163 95.53 1328 accept 0 ALIGNMENT 991 YS2-17g17.p1k chr12 1232 26 398694 399900 C 1207 94.61 1354 accept 0 ALIGNMENT 65 YS2-17g18.p1k chr04 145 251 820609 820713 F 107 89.72 269 accept 0 ALIGNMENT 0 YS2-17g18.p1k chr04 252 269 820713 820712 F 18 0.00 269 accept 0 ALIGNMENT 1039 YS2-17g20.q1k chr15 39 1172 877553 878684 F 1134 96.91 1433 accept 0 ALIGNMENT 972 YS2-17g20.p1k chr15 1076 30 881779 882835 C 1047 98.19 1389 accept 0 ALIGNMENT 230 YS2-17g21.q1k chr12 29 278 55032 55281 F 250 98.00 319 accept_chi 1 ALIGNMENT 38 YS2-17g21.q1k vc_7 282 319 13525 13562 F 38 100.00 319 reject_low 6 ALIGNMENT 0 YS2-17g21.p1k chr12 296 279 55033 55032 C 18 0.00 296 accept_chi 0 ALIGNMENT 0 YS2-17g21.q1k vc_1 277 62 2514 2513 C 216 0.00 319 reject_low 2 ALIGNMENT 42 YS2-17g21.q1k vc_4 278 319 5830 5871 F 42 100.00 319 reject_low 4 ALIGNMENT 0 YS2-17g21.q1k chr12 279 319 55281 55280 F 41 0.00 319 accept_chi 1 ALIGNMENT 0 YS2-17g21.q1k vc_4 62 277 5830 5829 F 216 0.00 319 reject_low 4 ALIGNMENT 36 YS2-17g21.q1k vc_5 316 281 1 36 C 36 100.00 319 reject_low 7 ALIGNMENT 0 YS2-17g21.q1k vc_5 280 62 37 36 C 219 0.00 319 reject_low 7 ALIGNMENT 0 YS2-17g21.q1k vc_3 277 62 2514 2513 C 216 0.00 319 reject_low 3 ALIGNMENT 42 YS2-17g21.q1k vc_3 319 278 2472 2513 C 42 100.00 319 reject_low 3 ALIGNMENT 234 YS2-17g21.p1k chr12 278 30 55032 55281 C 249 98.80 296 accept_chi 0 ALIGNMENT 39 YS2-17g21.q1k vc_5 319 281 5025 5063 C 39 100.00 319 reject_low 5 ALIGNMENT 0 YS2-17g21.q1k vc_7 62 281 13525 13524 F 220 0.00 319 reject_low 6 ALIGNMENT 0 YS2-17g21.q1k vc_5 280 62 5064 5063 C 219 0.00 319 reject_low 5 ALIGNMENT 42 YS2-17g21.q1k vc_1 319 278 2472 2513 C 42 100.00 319 reject_low 2 ALIGNMENT 0 YS2-17g22.q1k vc_5 292 62 5064 5063 C 231 0.00 331 reject_low 6 ALIGNMENT 41 YS2-17g22.q1k vc_4 291 331 5831 5871 F 41 100.00 331 reject_low 5 ALIGNMENT 39 YS2-17g22.q1k vc_5 331 293 5025 5063 C 39 100.00 331 reject_low 6 ALIGNMENT 38 YS2-17g22.q1k vc_7 294 331 13525 13562 F 38 100.00 331 reject_low 7 ALIGNMENT 215 YS2-17g22.p1k chr14 278 29 552042 552293 C 250 97.20 297 accept_chi 1 ALIGNMENT 0 YS2-17g22.q1k vc_7 62 293 13525 13524 F 232 0.00 331 reject_low 7 ALIGNMENT 41 YS2-17g22.q1k vc_2 331 291 2105 2145 C 41 100.00 331 reject_low 3 ALIGNMENT 0 YS2-17g22.q1k vc_4 62 290 5831 5830 F 229 0.00 331 reject_low 5 ALIGNMENT 0 YS2-17g22.q1k vc_5 292 62 37 36 C 231 0.00 331 reject_low 8 ALIGNMENT 0 YS2-17g22.q1k vc_1 290 62 2513 2512 C 229 0.00 331 reject_low 2 ALIGNMENT 41 YS2-17g22.q1k vc_1 331 291 2472 2512 C 41 100.00 331 reject_low 2 ALIGNMENT 0 YS2-17g22.q1k vc_3 290 62 2513 2512 C 229 0.00 331 reject_low 4 ALIGNMENT 0 YS2-17g22.p1k chr14 297 279 552043 552042 C 19 0.00 297 accept_chi 1 ALIGNMENT 224 YS2-17g22.q1k chr14 40 291 552042 552293 F 252 98.02 331 accept_chi 0 ALIGNMENT 0 YS2-17g22.q1k chr14 292 331 552293 552292 F 40 0.00 331 accept_chi 0 ALIGNMENT 0 YS2-17g22.q1k vc_2 290 62 2146 2145 C 229 0.00 331 reject_low 3 ALIGNMENT 41 YS2-17g22.q1k vc_3 331 291 2472 2512 C 41 100.00 331 reject_low 4 ALIGNMENT 36 YS2-17g22.q1k vc_5 328 293 1 36 C 36 100.00 331 reject_low 8 ALIGNMENT 0 YS2-17g23.q1k vc_1 595 62 2514 2513 C 534 0.00 637 reject_vc 0 ALIGNMENT 42 YS2-17g23.q1k vc_4 596 637 5830 5871 F 42 100.00 637 reject_vc 2 ALIGNMENT 38 YS2-17g23.q1k vc_7 600 637 13525 13562 F 38 100.00 637 reject_vc 4 ALIGNMENT 42 YS2-17g23.q1k vc_1 637 596 2472 2513 C 42 100.00 637 reject_vc 0 ALIGNMENT 0 YS2-17g23.q1k vc_3 595 62 2514 2513 C 534 0.00 637 reject_vc 1 ALIGNMENT 42 YS2-17g23.q1k vc_3 637 596 2472 2513 C 42 100.00 637 reject_vc 1 ALIGNMENT 39 YS2-17g23.q1k vc_5 637 599 5025 5063 C 39 100.00 637 reject_vc 3 ALIGNMENT 0 YS2-17g23.q1k vc_7 62 599 13525 13524 F 538 0.00 637 reject_vc 4 ALIGNMENT 0 YS2-17g23.q1k vc_5 598 62 37 36 C 537 0.00 637 reject_vc 5 ALIGNMENT 36 YS2-17g23.q1k vc_5 634 599 1 36 C 36 100.00 637 reject_vc 5 ALIGNMENT 0 YS2-17g23.q1k vc_5 598 62 5064 5063 C 537 0.00 637 reject_vc 3 ALIGNMENT 0 YS2-17g23.q1k vc_4 62 595 5830 5829 F 534 0.00 637 reject_vc 2 ALIGNMENT 885 YS2-17g24.p1k chr11 1170 36 272426 273559 C 1135 94.45 1328 accept 0 ALIGNMENT 822 YS2-17g24.q1k chr11 83 1096 268838 269847 F 1014 94.58 1259 accept 0 ALIGNMENT 1047 YS2-17h02.q1k chr14 1218 40 209754 210937 C 1179 96.95 1420 accept 0 ALIGNMENT 866 YS2-17h02.p1k chr14 32 1056 206342 207369 F 1025 95.61 1443 accept 0 ALIGNMENT 421 YS2-17h04.q1k chr14 940 87 210039 210888 C 854 83.84 1377 accept 0 ALIGNMENT 41 YS2-17h06.q1k vc_4 188 228 5831 5871 F 41 100.00 228 reject_low 4 ALIGNMENT 0 YS2-17h06.q1k chr04 189 228 400419 400418 F 40 0.00 228 accept_chi 0 ALIGNMENT 0 YS2-17h06.q1k vc_7 62 190 13525 13524 F 129 0.00 228 reject_low 6 ALIGNMENT 41 YS2-17h06.q1k vc_1 228 188 2472 2512 C 41 100.00 228 reject_low 2 ALIGNMENT 40 YS2-17h06.q1k vc_5 228 186 5025 5067 C 43 97.67 228 reject_low 5 ALIGNMENT 149 YS2-17h06.q1k chr04 39 188 400270 400419 F 150 100.00 228 accept_chi 0 ALIGNMENT 145 YS2-17h06.p1k chr04 215 66 400270 400419 C 150 99.33 215 accept_chi 1 ALIGNMENT 0 YS2-17h06.q1k vc_5 185 62 41 40 C 124 0.00 228 reject_low 7 ALIGNMENT 41 YS2-17h06.q1k vc_3 228 188 2472 2512 C 41 100.00 228 reject_low 3 ALIGNMENT 0 YS2-17h06.q1k vc_3 187 62 2513 2512 C 126 0.00 228 reject_low 3 ALIGNMENT 37 YS2-17h06.q1k vc_5 225 186 1 40 C 40 97.50 228 reject_low 7 ALIGNMENT 0 YS2-17h06.q1k vc_1 187 62 2513 2512 C 126 0.00 228 reject_low 2 ALIGNMENT 38 YS2-17h06.q1k vc_7 191 228 13525 13562 F 38 100.00 228 reject_low 6 ALIGNMENT 0 YS2-17h06.q1k vc_4 62 187 5831 5830 F 126 0.00 228 reject_low 4 ALIGNMENT 0 YS2-17h06.q1k vc_5 185 62 5068 5067 C 124 0.00 228 reject_low 5 ALIGNMENT 315 YS2-17h08.q1k chr15 375 39 106901 107236 C 337 99.41 416 accept_chi 1 ALIGNMENT 0 YS2-17h08.p1k chr15 362 379 107236 107235 F 18 0.00 379 accept_chi 0 ALIGNMENT 0 YS2-17h08.q1k vc_1 374 62 2514 2513 C 313 0.00 416 reject_low 2 ALIGNMENT 0 YS2-17h08.q1k vc_5 377 62 37 36 C 316 0.00 416 reject_low 8 ALIGNMENT 0 YS2-17h08.q1k vc_7 62 378 13525 13524 F 317 0.00 416 reject_low 7 ALIGNMENT 0 YS2-17h08.q1k chr15 416 376 106902 106901 C 41 0.00 416 accept_chi 1 ALIGNMENT 42 YS2-17h08.q1k vc_3 416 375 2472 2513 C 42 100.00 416 reject_low 4 ALIGNMENT 0 YS2-17h08.q1k vc_5 377 62 5064 5063 C 316 0.00 416 reject_low 6 ALIGNMENT 38 YS2-17h08.q1k vc_7 379 416 13525 13562 F 38 100.00 416 reject_low 7 ALIGNMENT 42 YS2-17h08.q1k vc_1 416 375 2472 2513 C 42 100.00 416 reject_low 2 ALIGNMENT 36 YS2-17h08.q1k vc_5 413 378 1 36 C 36 100.00 416 reject_low 8 ALIGNMENT 0 YS2-17h08.q1k vc_2 374 62 2147 2146 C 313 0.00 416 reject_low 3 ALIGNMENT 316 YS2-17h08.p1k chr15 29 361 106904 107236 F 333 99.70 379 accept_chi 0 ALIGNMENT 39 YS2-17h08.q1k vc_5 416 378 5025 5063 C 39 100.00 416 reject_low 6 ALIGNMENT 42 YS2-17h08.q1k vc_2 416 375 2105 2146 C 42 100.00 416 reject_low 3 ALIGNMENT 0 YS2-17h08.q1k vc_4 62 374 5830 5829 F 313 0.00 416 reject_low 5 ALIGNMENT 42 YS2-17h08.q1k vc_4 375 416 5830 5871 F 42 100.00 416 reject_low 5 ALIGNMENT 0 YS2-17h08.q1k vc_3 374 62 2514 2513 C 313 0.00 416 reject_low 4 ALIGNMENT 911 YS2-17h09.q1k chr08 1120 34 270701 271799 C 1087 96.69 1446 accept 0 ALIGNMENT 872 YS2-17h09.p1k chr08 31 1022 266707 267713 F 992 96.98 1425 accept 0 ALIGNMENT 813 YS2-17h10.q1k chr14 31 937 4515 5430 F 907 97.24 1327 reject_low 8 ALIGNMENT 401 YS2-17h10.q1k chr16 937 477 943696 944166 C 461 96.75 1327 reject_low 13 ALIGNMENT 390 YS2-17h10.q1k chr08 937 477 558150 558619 C 461 96.10 1327 accept 0 ALIGNMENT 817 YS2-17h10.q1k chr12 937 30 1072833 1073749 C 908 97.36 1327 reject_low 5 ALIGNMENT 0 YS2-17h10.p1k chr01 62 118 227037 227036 F 57 0.00 1416 reject_low 1 ALIGNMENT 0 YS2-17h10.q1k chr06 62 478 3050 3049 F 417 0.00 1327 reject_low 14 ALIGNMENT 813 YS2-17h10.q1k chr16 31 937 4424 5339 F 907 97.24 1327 reject_low 9 ALIGNMENT 831 YS2-17h10.q1k chr10 30 937 4885 5802 F 908 97.91 1327 reject_low 3 ALIGNMENT 831 YS2-17h10.q1k chr09 30 937 4902 5819 F 908 97.91 1327 reject_low 2 ALIGNMENT 817 YS2-17h10.q1k chr04 937 30 1526632 1527548 C 908 97.36 1327 reject_low 4 ALIGNMENT 813 YS2-17h10.q1k chr07 937 31 1085538 1086453 C 907 97.24 1327 reject_low 7 ALIGNMENT 399 YS2-17h10.q1k chr06 479 937 3050 3518 F 459 96.73 1327 reject_low 14 ALIGNMENT 390 YS2-17h10.q1k chr02 477 937 4212 4681 F 461 96.10 1327 reject_low 19 ALIGNMENT 0 YS2-17h10.q1k chr08 62 476 3743 3742 F 415 0.00 1327 reject_low 15 ALIGNMENT 864 YS2-17h10.p1k chr08 34 1059 553600 554640 F 1026 96.39 1416 accept 0 ALIGNMENT 0 YS2-17h10.q1k chr05 62 97 4586 4585 F 36 0.00 1327 reject_low 12 ALIGNMENT 0 YS2-17h10.p1k chr12 668 779 1002363 1002497 F 112 0.00 1416 reject_low 20 ALIGNMENT 77 YS2-17h10.p1k chr12 780 957 1002498 1002679 F 178 83.15 1416 reject_low 20 ALIGNMENT 817 YS2-17h10.q1k chr15 937 30 1085797 1086713 C 908 97.36 1327 reject_low 6 ALIGNMENT 0 YS2-17h10.q1k chr02 62 476 4212 4211 F 415 0.00 1327 reject_low 19 ALIGNMENT 393 YS2-17h10.q1k chr12 477 937 4011 4480 F 461 96.31 1327 reject_low 16 ALIGNMENT 0 YS2-17h10.q1k chr12 62 476 4011 4010 F 415 0.00 1327 reject_low 16 ALIGNMENT 795 YS2-17h10.q1k chr05 926 31 571473 572376 C 896 96.88 1327 reject_low 10 ALIGNMENT 0 YS2-17h10.q1k chr16 476 62 944167 944166 C 415 0.00 1327 reject_low 13 ALIGNMENT 631 YS2-17h10.q1k chr05 98 922 4586 5385 F 825 94.18 1327 reject_low 12 ALIGNMENT 0 YS2-17h10.p1k chr12 62 625 1002320 1002319 F 564 0.00 1416 reject_low 20 ALIGNMENT 440 YS2-17h10.p1k chr01 119 1045 227037 227960 F 927 85.22 1416 reject_low 1 ALIGNMENT 0 YS2-17h10.q1k chr12 97 62 1067098 1067097 C 36 0.00 1327 reject_low 11 ALIGNMENT 26 YS2-17h10.p1k chr12 626 667 1002320 1002362 F 42 88.10 1416 reject_low 20 ALIGNMENT 637 YS2-17h10.q1k chr12 937 98 1066281 1067097 C 840 94.05 1327 reject_low 11 ALIGNMENT 0 YS2-17h10.q1k chr13 62 476 3887 3886 F 415 0.00 1327 reject_low 18 ALIGNMENT 393 YS2-17h10.q1k chr12 477 937 9546 10015 F 461 96.31 1327 reject_low 17 ALIGNMENT 0 YS2-17h10.q1k chr08 476 62 558620 558619 C 415 0.00 1327 accept 0 ALIGNMENT 393 YS2-17h10.q1k chr08 477 937 3743 4212 F 461 96.31 1327 reject_low 15 ALIGNMENT 0 YS2-17h10.q1k chr12 62 476 9546 9545 F 415 0.00 1327 reject_low 17 ALIGNMENT 393 YS2-17h10.q1k chr13 477 937 3887 4356 F 461 96.31 1327 reject_low 18 ALIGNMENT 36 YS2-17h12.q1k vc_5 267 232 1 36 C 36 100.00 270 reject_low 7 ALIGNMENT 0 YS2-17h12.q1k vc_2 229 62 2146 2145 C 168 0.00 270 reject_low 2 ALIGNMENT 0 YS2-17h12.q1k vc_4 62 229 5831 5830 F 168 0.00 270 reject_low 4 ALIGNMENT 0 YS2-17h12.q1k vc_1 229 62 2513 2512 C 168 0.00 270 reject_low 1 ALIGNMENT 39 YS2-17h12.q1k vc_5 270 232 5025 5063 C 39 100.00 270 reject_low 5 ALIGNMENT 164 YS2-17h12.q1k chr10 36 227 121775 121967 F 192 97.92 270 accept 0 ALIGNMENT 41 YS2-17h12.q1k vc_3 270 230 2472 2512 C 41 100.00 270 reject_low 3 ALIGNMENT 41 YS2-17h12.q1k vc_4 230 270 5831 5871 F 41 100.00 270 reject_low 4 ALIGNMENT 0 YS2-17h12.q1k vc_7 62 232 13525 13524 F 171 0.00 270 reject_low 6 ALIGNMENT 0 YS2-17h12.q1k chr10 228 270 121967 121966 F 43 0.00 270 accept 0 ALIGNMENT 41 YS2-17h12.q1k vc_1 270 230 2472 2512 C 41 100.00 270 reject_low 1 ALIGNMENT 0 YS2-17h12.q1k vc_5 231 62 5064 5063 C 170 0.00 270 reject_low 5 ALIGNMENT 0 YS2-17h12.q1k vc_5 231 62 37 36 C 170 0.00 270 reject_low 7 ALIGNMENT 38 YS2-17h12.q1k vc_7 233 270 13525 13562 F 38 100.00 270 reject_low 6 ALIGNMENT 0 YS2-17h12.q1k vc_3 229 62 2513 2512 C 168 0.00 270 reject_low 3 ALIGNMENT 41 YS2-17h12.q1k vc_2 270 230 2105 2145 C 41 100.00 270 reject_low 2 ALIGNMENT 0 YS2-17h15.q1k vc_4 62 215 5831 5830 F 154 0.00 256 reject_low 4 ALIGNMENT 0 YS2-17h15.q1k vc_7 62 218 13525 13524 F 157 0.00 256 reject_low 6 ALIGNMENT 0 YS2-17h15.q1k vc_3 215 62 2513 2512 C 154 0.00 256 reject_low 3 ALIGNMENT 0 YS2-17h15.q1k vc_5 217 62 37 36 C 156 0.00 256 reject_low 7 ALIGNMENT 41 YS2-17h15.q1k vc_4 216 256 5831 5871 F 41 100.00 256 reject_low 4 ALIGNMENT 36 YS2-17h15.q1k vc_5 253 218 1 36 C 36 100.00 256 reject_low 7 ALIGNMENT 0 YS2-17h15.q1k vc_2 215 62 2146 2145 C 154 0.00 256 reject_low 2 ALIGNMENT 39 YS2-17h15.q1k vc_5 256 218 5025 5063 C 39 100.00 256 reject_low 5 ALIGNMENT 170 YS2-17h15.q1k chr06 44 215 254072 254243 F 172 100.00 256 accept 0 ALIGNMENT 41 YS2-17h15.q1k vc_1 256 216 2472 2512 C 41 100.00 256 reject_low 1 ALIGNMENT 41 YS2-17h15.q1k vc_2 256 216 2105 2145 C 41 100.00 256 reject_low 2 ALIGNMENT 0 YS2-17h15.q1k chr06 216 256 254243 254242 F 41 0.00 256 accept 0 ALIGNMENT 38 YS2-17h15.q1k vc_7 219 256 13525 13562 F 38 100.00 256 reject_low 6 ALIGNMENT 0 YS2-17h15.q1k vc_5 217 62 5064 5063 C 156 0.00 256 reject_low 5 ALIGNMENT 0 YS2-17h15.q1k vc_1 215 62 2513 2512 C 154 0.00 256 reject_low 1 ALIGNMENT 41 YS2-17h15.q1k vc_3 256 216 2472 2512 C 41 100.00 256 reject_low 3 ALIGNMENT 939 YS2-17h17.q1k chr10 1115 34 296307 297389 C 1082 95.84 1384 accept 0 ALIGNMENT 317 YS2-17h17.p1k chr10 147 630 291622 292097 F 484 90.29 1018 accept 0 ALIGNMENT 1005 YS2-17h18.q1k chr12 53 1116 461107 462177 F 1064 98.21 1396 accept 1 ALIGNMENT 195 YS2-17h18.p1k chr12 479 194 457495 457770 C 286 91.96 943 accept 0 ALIGNMENT 593 YS2-17h18.q1k chr12 53 659 489938 490543 F 607 99.34 1396 reject_low 2 ALIGNMENT 1005 YS2-17h18.q1k chr12 53 1116 451970 453040 F 1064 98.21 1396 accept 0 ALIGNMENT 0 YS2-17h18.q1k chr12 660 893 490543 490542 F 234 0.00 1396 reject_low 2 ALIGNMENT 195 YS2-17h18.p1k chr12 479 194 466632 466907 C 286 91.96 943 accept 1 ALIGNMENT 747 YS2-17h19.q1k chr08 39 1050 95871 96888 F 1012 92.59 1312 accept 0 ALIGNMENT 716 YS2-17h19.p1k chr08 1036 33 99641 100632 C 1004 91.43 1397 accept 0 ALIGNMENT 0 YS2-17h23.q1k chr16 382 236 378355 378502 C 147 0.00 1327 reject_bad_break 0 ALIGNMENT 105 YS2-17h23.q1k chr16 235 33 378503 378704 C 203 84.24 1327 reject_bad_break 0 ALIGNMENT 21 YS2-17h23.q1k chr16 420 383 378317 378354 C 38 86.84 1327 reject_bad_break 0 ALIGNMENT 0 YS2-17h24.q1k chr02 188 62 163929 163928 C 127 0.00 1293 reject_low 1 ALIGNMENT 978 YS2-17h24.p1k chr02 1125 28 420412 421516 C 1098 96.81 1301 accept 0 ALIGNMENT 911 YS2-17h24.q1k chr02 58 1088 415885 416919 F 1031 96.99 1293 accept 0 ALIGNMENT 286 YS2-17h24.q1k chr02 976 189 163142 163928 C 788 79.31 1293 reject_low 1 ALIGNMENT 1054 YS2-17i01.q1k chr11 1215 29 295686 296889 C 1187 97.30 1331 accept 0 ALIGNMENT 39 YS2-17i02.q1k vc_5 389 351 5025 5063 C 39 100.00 389 reject_low 6 ALIGNMENT 36 YS2-17i02.q1k vc_5 386 351 1 36 C 36 100.00 389 reject_low 8 ALIGNMENT 41 YS2-17i02.q1k vc_4 349 389 5831 5871 F 41 100.00 389 reject_low 5 ALIGNMENT 0 YS2-17i02.q1k chr16 389 349 922674 922673 C 41 0.00 389 ambiguous_tel 0 ALIGNMENT 41 YS2-17i02.q1k vc_1 389 349 2472 2512 C 41 100.00 389 reject_low 2 ALIGNMENT 41 YS2-17i02.q1k vc_3 389 349 2472 2512 C 41 100.00 389 reject_low 4 ALIGNMENT 0 YS2-17i02.q1k vc_3 348 62 2513 2512 C 287 0.00 389 reject_low 4 ALIGNMENT 0 YS2-17i02.q1k vc_1 348 62 2513 2512 C 287 0.00 389 reject_low 2 ALIGNMENT 0 YS2-17i02.p1k chr16 340 357 922980 922979 F 18 0.00 357 ambiguous_tel 1 ALIGNMENT 38 YS2-17i02.q1k vc_7 352 389 13525 13562 F 38 100.00 389 reject_low 7 ALIGNMENT 291 YS2-17i02.q1k chr16 348 39 922673 922980 C 310 99.35 389 ambiguous_tel 0 ALIGNMENT 0 YS2-17i02.q1k vc_5 350 62 37 36 C 289 0.00 389 reject_low 8 ALIGNMENT 41 YS2-17i02.q1k vc_2 389 349 2105 2145 C 41 100.00 389 reject_low 3 ALIGNMENT 0 YS2-17i02.q1k vc_2 348 62 2146 2145 C 287 0.00 389 reject_low 3 ALIGNMENT 279 YS2-17i02.p1k chr16 31 339 922673 922980 F 309 98.38 357 ambiguous_tel 1 ALIGNMENT 0 YS2-17i02.q1k vc_4 62 348 5831 5830 F 287 0.00 389 reject_low 5 ALIGNMENT 0 YS2-17i02.q1k vc_5 350 62 5064 5063 C 289 0.00 389 reject_low 6 ALIGNMENT 0 YS2-17i02.q1k vc_7 62 351 13525 13524 F 290 0.00 389 reject_low 7 ALIGNMENT 932 YS2-17i08.q1k chr16 1149 39 626588 627704 C 1111 95.05 1490 accept 0 ALIGNMENT 903 YS2-17i08.p1k chr16 32 1073 622735 623787 F 1042 96.55 1440 accept 0 ALIGNMENT 989 YS2-17i09.p1k chr16 67 1210 430089 431233 F 1144 96.33 1475 accept 0 ALIGNMENT 1020 YS2-17i09.q1k chr16 1154 28 432356 433488 C 1127 96.89 1359 accept 0 ALIGNMENT 0 YS2-17i10.p1k chr14 621 604 5221 5220 C 18 0.00 621 ambiguous_tel 2 ALIGNMENT 0 YS2-17i10.p1k chr14 560 62 5263 5262 C 499 0.00 621 ambiguous_tel 2 ALIGNMENT 0 YS2-17i10.q1k chr14 80 613 5262 5261 F 534 0.00 613 ambiguous_tel 5 ALIGNMENT 34 YS2-17i10.p1k chr07 561 603 1085706 1085748 F 43 93.02 621 ambiguous_tel 0 ALIGNMENT 0 YS2-17i10.p1k chr07 62 560 1085706 1085705 F 499 0.00 621 ambiguous_tel 0 ALIGNMENT 34 YS2-17i10.p1k chr08 561 603 558318 558360 F 43 93.02 621 ambiguous_tel 1 ALIGNMENT 29 YS2-17i10.q1k chr08 79 38 558318 558360 C 42 90.48 613 ambiguous_tel 4 ALIGNMENT 34 YS2-17i10.p1k chr14 603 561 5220 5262 C 43 93.02 621 ambiguous_tel 2 ALIGNMENT 29 YS2-17i10.q1k chr07 79 38 1085706 1085748 C 42 90.48 613 ambiguous_tel 3 ALIGNMENT 0 YS2-17i10.q1k chr08 613 80 558319 558318 C 534 0.00 613 ambiguous_tel 4 ALIGNMENT 0 YS2-17i10.q1k chr07 613 80 1085707 1085706 C 534 0.00 613 ambiguous_tel 3 ALIGNMENT 29 YS2-17i10.q1k chr14 38 79 5220 5262 F 42 90.48 613 ambiguous_tel 5 ALIGNMENT 0 YS2-17i10.p1k chr07 604 621 1085748 1085747 F 18 0.00 621 ambiguous_tel 0 ALIGNMENT 0 YS2-17i10.p1k chr08 604 621 558360 558359 F 18 0.00 621 ambiguous_tel 1 ALIGNMENT 0 YS2-17i10.p1k chr08 62 560 558318 558317 F 499 0.00 621 ambiguous_tel 1 ALIGNMENT 0 YS2-17i12.q1k vc_5 462 62 5064 5063 C 401 0.00 501 reject_low 5 ALIGNMENT 36 YS2-17i12.q1k vc_5 498 463 1 36 C 36 100.00 501 reject_low 7 ALIGNMENT 394 YS2-17i12.p1k chr11 448 25 383628 384052 C 424 98.11 467 accept_chi 1 ALIGNMENT 41 YS2-17i12.q1k vc_1 501 461 2472 2512 C 41 100.00 501 reject_low 2 ALIGNMENT 39 YS2-17i12.q1k vc_5 501 463 5025 5063 C 39 100.00 501 reject_low 5 ALIGNMENT 0 YS2-17i12.q1k chr11 462 501 384052 384051 F 40 0.00 501 accept_chi 0 ALIGNMENT 0 YS2-17i12.q1k vc_5 462 62 37 36 C 401 0.00 501 reject_low 7 ALIGNMENT 0 YS2-17i12.q1k vc_3 460 62 2513 2512 C 399 0.00 501 reject_low 3 ALIGNMENT 41 YS2-17i12.q1k vc_3 501 461 2472 2512 C 41 100.00 501 reject_low 3 ALIGNMENT 41 YS2-17i12.q1k vc_4 461 501 5831 5871 F 41 100.00 501 reject_low 4 ALIGNMENT 0 YS2-17i12.p1k chr11 467 449 383629 383628 C 19 0.00 467 accept_chi 1 ALIGNMENT 399 YS2-17i12.q1k chr11 42 461 383633 384052 F 420 98.81 501 accept_chi 0 ALIGNMENT 0 YS2-17i12.q1k vc_4 62 460 5831 5830 F 399 0.00 501 reject_low 4 ALIGNMENT 0 YS2-17i12.q1k vc_1 460 62 2513 2512 C 399 0.00 501 reject_low 2 ALIGNMENT 0 YS2-17i12.q1k vc_7 62 463 13525 13524 F 402 0.00 501 reject_low 6 ALIGNMENT 38 YS2-17i12.q1k vc_7 464 501 13525 13562 F 38 100.00 501 reject_low 6 ALIGNMENT 987 YS2-17i13.p1k chr13 32 1189 814503 815675 F 1158 96.55 1358 accept 0 ALIGNMENT 974 YS2-17i13.q1k chr13 1203 37 817152 818322 C 1167 95.37 1373 accept 0 ALIGNMENT 979 YS2-17i14.q1k chr14 1134 37 173224 174330 C 1098 97.27 1436 accept 0 ALIGNMENT 918 YS2-17i14.p1k chr14 30 1054 169461 170496 F 1025 97.27 1373 accept 0 ALIGNMENT 997 YS2-17i18.q1k chr12 51 1128 452903 453995 F 1078 97.87 1385 accept 0 ALIGNMENT 997 YS2-17i18.q1k chr12 51 1128 462040 463132 F 1078 97.87 1385 accept 1 ALIGNMENT 936 YS2-17i18.p1k chr12 1196 124 463843 464916 C 1073 96.55 1529 accept 1 ALIGNMENT 936 YS2-17i18.p1k chr12 1196 124 454706 455779 C 1073 96.55 1529 accept 0 ALIGNMENT 41 YS2-17i19.q1k vc_4 318 358 5831 5871 F 41 100.00 358 reject_low 4 ALIGNMENT 0 YS2-17i19.q1k vc_1 317 62 2513 2512 C 256 0.00 358 reject_low 2 ALIGNMENT 0 YS2-17i19.q1k vc_3 317 62 2513 2512 C 256 0.00 358 reject_low 3 ALIGNMENT 0 YS2-17i19.q1k vc_5 319 62 5064 5063 C 258 0.00 358 reject_low 5 ALIGNMENT 0 YS2-17i19.q1k vc_7 62 320 13525 13524 F 259 0.00 358 reject_low 6 ALIGNMENT 36 YS2-17i19.q1k vc_5 355 320 1 36 C 36 100.00 358 reject_low 7 ALIGNMENT 38 YS2-17i19.q1k vc_7 321 358 13525 13562 F 38 100.00 358 reject_low 6 ALIGNMENT 0 YS2-17i19.q1k vc_4 62 317 5831 5830 F 256 0.00 358 reject_low 4 ALIGNMENT 0 YS2-17i19.q1k chr04 319 358 1255612 1255611 F 40 0.00 358 accept_chi 1 ALIGNMENT 41 YS2-17i19.q1k vc_3 358 318 2472 2512 C 41 100.00 358 reject_low 3 ALIGNMENT 0 YS2-17i19.q1k vc_5 319 62 37 36 C 258 0.00 358 reject_low 7 ALIGNMENT 39 YS2-17i19.q1k vc_5 358 320 5025 5063 C 39 100.00 358 reject_low 5 ALIGNMENT 41 YS2-17i19.q1k vc_1 358 318 2472 2512 C 41 100.00 358 reject_low 2 ALIGNMENT 275 YS2-17i19.p1k chr04 316 27 1255322 1255612 C 290 99.31 335 accept_chi 0 ALIGNMENT 0 YS2-17i19.p1k chr04 335 317 1255323 1255322 C 19 0.00 335 accept_chi 0 ALIGNMENT 264 YS2-17i19.q1k chr04 34 318 1255327 1255612 F 285 98.60 358 accept_chi 1 ALIGNMENT 914 YS2-17i20.p1k chr09 1078 31 63098 64146 C 1048 97.04 1396 accept 0 ALIGNMENT 909 YS2-17i20.q1k chr09 32 1067 62893 63941 F 1036 97.59 1299 accept 0 ALIGNMENT 921 YS2-17i22.p1k chr13 28 1097 763891 764965 F 1070 97.10 1328 accept 0 ALIGNMENT 903 YS2-17i22.q1k chr13 1080 29 764960 766025 C 1052 96.58 1345 accept 0 ALIGNMENT 0 YS2-17i23.q1k vc_3 205 62 2513 2512 C 144 0.00 246 reject_low 3 ALIGNMENT 0 YS2-17i23.q1k vc_1 205 62 2513 2512 C 144 0.00 246 reject_low 2 ALIGNMENT 0 YS2-17i23.p1k chr12 238 255 460171 460170 F 18 0.00 255 accept_chi 0 ALIGNMENT 39 YS2-17i23.q1k vc_5 246 208 5025 5063 C 39 100.00 246 reject_low 5 ALIGNMENT 41 YS2-17i23.q1k vc_4 206 246 5831 5871 F 41 100.00 246 reject_low 4 ALIGNMENT 0 YS2-17i23.q1k vc_5 207 62 37 36 C 146 0.00 246 reject_low 7 ALIGNMENT 131 YS2-17i23.p1k chr12 72 237 460006 460171 F 166 95.78 255 accept_chi 0 ALIGNMENT 36 YS2-17i23.q1k vc_5 243 208 1 36 C 36 100.00 246 reject_low 7 ALIGNMENT 0 YS2-17i23.q1k vc_7 62 208 13525 13524 F 147 0.00 246 reject_low 6 ALIGNMENT 0 YS2-17i23.q1k vc_4 62 205 5831 5830 F 144 0.00 246 reject_low 4 ALIGNMENT 41 YS2-17i23.q1k vc_1 246 206 2472 2512 C 41 100.00 246 reject_low 2 ALIGNMENT 0 YS2-17i23.q1k vc_5 207 62 5064 5063 C 146 0.00 246 reject_low 5 ALIGNMENT 0 YS2-17i23.q1k chr12 246 202 460007 460006 C 45 0.00 246 accept_chi 1 ALIGNMENT 130 YS2-17i23.q1k chr12 201 37 460006 460171 C 165 95.15 246 accept_chi 1 ALIGNMENT 41 YS2-17i23.q1k vc_3 246 206 2472 2512 C 41 100.00 246 reject_low 3 ALIGNMENT 38 YS2-17i23.q1k vc_7 209 246 13525 13562 F 38 100.00 246 reject_low 6 ALIGNMENT 990 YS2-17i24.q1k chr12 28 1106 553842 554926 F 1079 97.50 1293 accept 0 ALIGNMENT 56 YS2-17j01.p1k chr10 283 358 61834 61909 F 76 92.11 1379 reject_low 1 ALIGNMENT 983 YS2-17j01.q1k chr03 36 1232 191516 192728 F 1197 95.66 1389 accept 0 ALIGNMENT 1033 YS2-17j01.p1k chr03 1240 32 195077 196302 C 1209 96.20 1379 accept 0 ALIGNMENT 0 YS2-17j01.p1k chr10 122 282 61673 61833 F 161 0.00 1379 reject_low 1 ALIGNMENT 0 YS2-17j01.p1k chr10 359 866 61909 61908 F 508 0.00 1379 reject_low 1 ALIGNMENT 22 YS2-17j01.p1k chr10 32 121 61583 61672 F 90 78.89 1379 reject_low 1 ALIGNMENT 967 YS2-17j02.q1k chr08 35 1156 330354 331491 F 1122 96.61 1339 accept 0 ALIGNMENT 1051 YS2-17j02.p1k chr08 1244 29 334597 335826 C 1216 95.48 1400 accept 0 ALIGNMENT 980 YS2-17j03.p1k chr16 1153 43 64634 65755 C 1111 97.21 1450 accept 0 ALIGNMENT 746 YS2-17j04.q1k chr14 1040 46 209944 210937 C 995 92.86 1384 accept 0 ALIGNMENT 914 YS2-17j07.q1k chr02 39 1065 238565 239599 F 1027 97.57 1368 accept 0 ALIGNMENT 973 YS2-17j07.p1k chr02 1149 34 238957 240082 C 1116 96.06 1443 accept 0 ALIGNMENT 967 YS2-17j08.q1k chr08 1162 33 398313 399459 C 1130 96.64 1384 accept 0 ALIGNMENT 970 YS2-17j08.p1k chr08 22 1110 393629 394727 F 1089 97.43 1380 accept 0 ALIGNMENT 493 YS2-17j09.p1k chrm 1212 113 26544 27665 C 1100 91.91 1486 accept 0 ALIGNMENT 788 YS2-17j09.q1k chrm 38 1092 25618 26698 F 1055 95.64 1351 accept 0 ALIGNMENT 882 YS2-17j11.q1k chr14 51 1053 291610 292628 F 1003 96.81 1378 accept 0 ALIGNMENT 973 YS2-17j11.p1k chr14 1222 31 295624 296816 C 1192 94.97 1507 accept 0 ALIGNMENT 977 YS2-17j12.p1k chr14 1155 31 295678 296816 C 1125 96.98 1406 accept 0 ALIGNMENT 982 YS2-17j12.q1k chr14 36 1228 291613 292821 F 1193 95.47 1436 accept 0 ALIGNMENT 1001 YS2-17j14.q1k chr13 34 1197 57823 58996 F 1164 95.96 1407 accept 0 ALIGNMENT 945 YS2-17j14.p1k chr13 1106 25 61481 62574 C 1082 96.77 1396 accept 0 ALIGNMENT 28 YS2-17j15.q1k chr02 912 851 464190 464251 C 62 87.10 1379 reject_low 1 ALIGNMENT 0 YS2-17j15.q1k chr02 850 62 464252 464251 C 789 0.00 1379 reject_low 1 ALIGNMENT 836 YS2-17j15.q1k chr02 41 1067 65122 66154 F 1027 95.52 1379 accept 0 ALIGNMENT 278 YS2-17j15.p1k chr02 530 173 69614 69965 C 358 93.58 914 accept 0 ALIGNMENT 24 YS2-17j15.q1k chr15 851 887 236280 236316 F 37 97.30 1379 reject_low 2 ALIGNMENT 0 YS2-17j15.q1k chr15 62 850 236280 236279 F 789 0.00 1379 reject_low 2 ALIGNMENT 36 YS2-17j16.q1k vc_5 603 568 1 36 C 36 100.00 606 reject_low 8 ALIGNMENT 0 YS2-17j16.q1k vc_4 62 563 5829 5828 F 502 0.00 606 reject_low 5 ALIGNMENT 0 YS2-17j16.q1k vc_5 567 62 37 36 C 506 0.00 606 reject_low 8 ALIGNMENT 42 YS2-17j16.q1k vc_2 606 564 2105 2147 C 43 100.00 606 reject_low 3 ALIGNMENT 0 YS2-17j16.q1k chr16 566 606 887795 887794 F 41 0.00 606 accept_chi 1 ALIGNMENT 39 YS2-17j16.q1k vc_5 606 568 5025 5063 C 39 100.00 606 reject_low 6 ALIGNMENT 38 YS2-17j16.q1k vc_7 569 606 13525 13562 F 38 100.00 606 reject_low 7 ALIGNMENT 42 YS2-17j16.q1k vc_1 606 564 2472 2514 C 43 100.00 606 reject_low 2 ALIGNMENT 42 YS2-17j16.q1k vc_4 564 606 5829 5871 F 43 100.00 606 reject_low 5 ALIGNMENT 0 YS2-17j16.q1k vc_5 567 62 5064 5063 C 506 0.00 606 reject_low 6 ALIGNMENT 511 YS2-17j16.q1k chr16 38 565 887266 887795 F 528 99.62 606 accept_chi 1 ALIGNMENT 42 YS2-17j16.q1k vc_3 606 564 2472 2514 C 43 100.00 606 reject_low 4 ALIGNMENT 516 YS2-17j16.p1k chr16 559 31 887266 887795 C 529 99.81 577 accept_chi 0 ALIGNMENT 0 YS2-17j16.q1k vc_2 563 62 2148 2147 C 502 0.00 606 reject_low 3 ALIGNMENT 0 YS2-17j16.q1k vc_7 62 568 13525 13524 F 507 0.00 606 reject_low 7 ALIGNMENT 0 YS2-17j16.p1k chr16 577 560 887267 887266 C 18 0.00 577 accept_chi 0 ALIGNMENT 0 YS2-17j16.q1k vc_3 563 62 2515 2514 C 502 0.00 606 reject_low 4 ALIGNMENT 0 YS2-17j16.q1k vc_1 563 62 2515 2514 C 502 0.00 606 reject_low 2 ALIGNMENT 60 YS2-17j17.q1k vc_4 689 623 46 112 C 67 97.01 1369 reject_low 21 ALIGNMENT 105 YS2-17j17.q1k vc_4 240 389 136 287 F 150 90.67 1369 reject_low 13 ALIGNMENT 206 YS2-17j17.p1k vc_1 298 1 1454 1749 C 298 90.27 797 reject_low 3 ALIGNMENT 0 YS2-17j17.q1k vc_4 230 239 5871 6362 F 10 0.00 1369 reject_low 18 ALIGNMENT 340 YS2-17j17.q1k vc_2 240 688 2174 2624 F 449 92.20 1369 reject_low 10 ALIGNMENT 109 YS2-17j17.q1k chrm 29 189 36758 36915 F 161 93.17 1369 reject_low 2 ALIGNMENT 0 YS2-17j17.q1k vc_4 390 622 288 1547 F 233 0.00 1369 reject_low 13 ALIGNMENT 200 YS2-17j17.p1k vc_7 1 298 13918 14213 F 298 89.60 797 reject_low 7 ALIGNMENT 30 YS2-17j17.q1k vc_2 229 191 2106 2144 C 39 92.31 1369 reject_low 15 ALIGNMENT 206 YS2-17j17.p1k vc_2 298 1 1454 1749 C 298 90.27 797 reject_low 4 ALIGNMENT 0 YS2-17j17.q1k vc_4 622 318 113 1445 C 305 0.00 1369 reject_low 21 ALIGNMENT 206 YS2-17j17.p1k vc_5 298 1 4374 4669 C 298 90.27 797 reject_vc 0 ALIGNMENT 30 YS2-17j17.q1k vc_1 229 191 2473 2511 C 39 92.31 1369 reject_low 14 ALIGNMENT 30 YS2-17j17.q1k vc_3 229 191 2473 2511 C 39 92.31 1369 reject_low 16 ALIGNMENT 0 YS2-17j17.q1k vc_7 689 689 4700 4921 C 1 0.00 1369 reject_low 12 ALIGNMENT 491 YS2-17j17.q1k vc_5 240 1006 2408 3178 F 767 88.53 1369 reject_vc 0 ALIGNMENT 60 YS2-17j17.q1k vc_4 689 623 6273 6339 C 67 97.01 1369 reject_low 17 ALIGNMENT 0 YS2-17j17.q1k vc_4 690 695 1615 1881 F 6 0.00 1369 reject_low 13 ALIGNMENT 191 YS2-17j17.q1k vc_7 688 438 4922 5172 C 251 92.03 1369 reject_low 12 ALIGNMENT 30 YS2-17j17.q1k vc_4 191 229 5832 5870 F 39 92.31 1369 reject_low 18 ALIGNMENT 29 YS2-17j17.q1k vc_5 229 192 5026 5063 C 38 92.11 1369 reject_low 19 ALIGNMENT 488 YS2-17j17.q1k vc_7 1003 240 1950 2717 C 764 88.48 1369 reject_vc 1 ALIGNMENT 206 YS2-17j17.p1k vc_3 298 1 1454 1749 C 298 90.27 797 reject_low 5 ALIGNMENT 105 YS2-17j17.q1k vc_4 240 389 6363 6514 F 150 90.67 1369 reject_low 18 ALIGNMENT 73 YS2-17j17.q1k vc_7 807 690 4583 4699 C 118 88.14 1369 reject_low 12 ALIGNMENT 58 YS2-17j17.q1k vc_4 317 240 1446 1524 C 78 92.31 1369 reject_low 21 ALIGNMENT 412 YS2-17j17.q1k vc_4 807 240 5232 5802 C 568 91.20 1369 reject_low 8 ALIGNMENT 60 YS2-17j17.q1k vc_4 623 689 1548 1614 F 67 97.01 1369 reject_low 13 ALIGNMENT 27 YS2-17j17.q1k vc_5 227 192 1 36 C 36 91.67 1369 reject_low 20 ALIGNMENT 200 YS2-17j17.p1k vc_7 1 298 456 751 F 298 89.60 797 reject_vc 1 ALIGNMENT 340 YS2-17j17.q1k vc_3 240 688 2541 2991 F 449 92.20 1369 reject_low 11 ALIGNMENT 206 YS2-17j17.p1k vc_6 1 298 3712 4007 F 298 90.27 797 reject_low 6 ALIGNMENT 340 YS2-17j17.q1k vc_1 240 688 2541 2991 F 449 92.20 1369 reject_low 9 ALIGNMENT 145 YS2-17j17.q1k vc_4 696 1006 1882 2194 F 311 83.28 1369 reject_low 13 ALIGNMENT 1005 YS2-17j18.q1k chr02 30 1172 748979 750141 F 1143 96.76 1395 accept 0 ALIGNMENT 931 YS2-17j18.p1k chr02 1193 25 753529 754693 C 1169 94.78 1446 accept 0 ALIGNMENT 996 YS2-17j19.p1k chr02 29 1147 638456 639570 F 1119 96.51 1444 accept 0 ALIGNMENT 1023 YS2-17j19.q1k chr02 1217 39 638768 639960 C 1179 96.27 1389 accept 0 ALIGNMENT 941 YS2-17j20.p1k chr07 1103 27 137337 138415 C 1077 96.66 1419 accept 0 ALIGNMENT 954 YS2-17j20.q1k chr07 39 1149 134146 135272 F 1111 96.58 1380 accept 0 ALIGNMENT 951 YS2-17j21.q1k chr07 1128 40 896628 897716 C 1089 96.60 1395 accept 0 ALIGNMENT 894 YS2-17j22.q1k chr16 37 1050 274879 275905 F 1014 97.44 1316 accept 0 ALIGNMENT 0 YS2-17j23.p1k chr16 419 436 378704 378703 F 18 0.00 436 accept_chi 1 ALIGNMENT 41 YS2-17j23.q1k vc_1 464 424 2472 2512 C 41 100.00 464 reject_low 2 ALIGNMENT 38 YS2-17j23.q1k vc_7 427 464 13525 13562 F 38 100.00 464 reject_low 6 ALIGNMENT 41 YS2-17j23.q1k vc_3 464 424 2472 2512 C 41 100.00 464 reject_low 3 ALIGNMENT 0 YS2-17j23.q1k vc_5 425 62 5064 5063 C 364 0.00 464 reject_low 5 ALIGNMENT 0 YS2-17j23.q1k vc_7 62 426 13525 13524 F 365 0.00 464 reject_low 6 ALIGNMENT 36 YS2-17j23.q1k vc_5 461 426 1 36 C 36 100.00 464 reject_low 7 ALIGNMENT 39 YS2-17j23.q1k vc_5 464 426 5025 5063 C 39 100.00 464 reject_low 5 ALIGNMENT 0 YS2-17j23.q1k vc_4 62 423 5831 5830 F 362 0.00 464 reject_low 4 ALIGNMENT 0 YS2-17j23.q1k vc_3 423 62 2513 2512 C 362 0.00 464 reject_low 3 ALIGNMENT 0 YS2-17j23.q1k vc_5 425 62 37 36 C 364 0.00 464 reject_low 7 ALIGNMENT 382 YS2-17j23.q1k chr16 424 32 378312 378704 C 393 99.49 464 accept_chi 0 ALIGNMENT 0 YS2-17j23.q1k vc_1 423 62 2513 2512 C 362 0.00 464 reject_low 2 ALIGNMENT 0 YS2-17j23.q1k chr16 464 425 378313 378312 C 40 0.00 464 accept_chi 0 ALIGNMENT 41 YS2-17j23.q1k vc_4 424 464 5831 5871 F 41 100.00 464 reject_low 4 ALIGNMENT 371 YS2-17j23.p1k chr16 28 418 378312 378704 F 391 98.98 436 accept_chi 1 ALIGNMENT 0 YS2-17j24.q1k chr10 297 260 398702 398701 C 38 0.00 297 accept_chi 1 ALIGNMENT 36 YS2-17j24.q1k vc_5 294 259 1 36 C 36 100.00 297 reject_low 8 ALIGNMENT 0 YS2-17j24.q1k vc_2 257 62 2145 2144 C 196 0.00 297 reject_low 3 ALIGNMENT 39 YS2-17j24.q1k vc_5 297 259 5025 5063 C 39 100.00 297 reject_low 6 ALIGNMENT 40 YS2-17j24.q1k vc_2 297 258 2105 2144 C 40 100.00 297 reject_low 3 ALIGNMENT 38 YS2-17j24.q1k vc_7 260 297 13525 13562 F 38 100.00 297 reject_low 7 ALIGNMENT 210 YS2-17j24.q1k chr10 259 39 398701 398921 C 221 99.55 297 accept_chi 1 ALIGNMENT 0 YS2-17j24.q1k vc_1 257 62 2512 2511 C 196 0.00 297 reject_low 2 ALIGNMENT 40 YS2-17j24.q1k vc_4 258 297 5832 5871 F 40 100.00 297 reject_low 5 ALIGNMENT 40 YS2-17j24.q1k vc_3 297 258 2472 2511 C 40 100.00 297 reject_low 4 ALIGNMENT 0 YS2-17j24.p1k chr10 259 276 398921 398920 F 18 0.00 276 accept_chi 0 ALIGNMENT 0 YS2-17j24.q1k vc_7 62 259 13525 13524 F 198 0.00 297 reject_low 7 ALIGNMENT 0 YS2-17j24.q1k vc_4 62 257 5832 5831 F 196 0.00 297 reject_low 5 ALIGNMENT 0 YS2-17j24.q1k vc_3 257 62 2512 2511 C 196 0.00 297 reject_low 4 ALIGNMENT 210 YS2-17j24.p1k chr10 38 258 398701 398921 F 221 99.55 276 accept_chi 0 ALIGNMENT 40 YS2-17j24.q1k vc_1 297 258 2472 2511 C 40 100.00 297 reject_low 2 ALIGNMENT 0 YS2-17j24.q1k vc_5 258 62 37 36 C 197 0.00 297 reject_low 8 ALIGNMENT 0 YS2-17j24.q1k vc_5 258 62 5064 5063 C 197 0.00 297 reject_low 6 ALIGNMENT 0 YS2-17k02.q1k chr13 62 411 587629 587628 F 350 0.00 1318 reject_low 7 ALIGNMENT 0 YS2-17k02.q1k chr10 411 62 470095 470094 C 350 0.00 1318 reject_low 8 ALIGNMENT 0 YS2-17k02.q1k chr09 410 62 105820 105819 C 349 0.00 1318 reject_low 6 ALIGNMENT 0 YS2-17k02.q1k chr13 518 847 587734 587733 F 330 0.00 1318 reject_low 7 ALIGNMENT 34 YS2-17k02.q1k chr04 412 518 778729 778834 F 107 96.26 1318 reject_low 3 ALIGNMENT 0 YS2-17k02.q1k chr06 457 847 73401 73400 F 391 0.00 1318 reject_low 4 ALIGNMENT 0 YS2-17k02.q1k chr09 847 523 105766 105765 C 325 0.00 1318 reject_low 2 ALIGNMENT 20 YS2-17k02.q1k chr13 412 517 587629 587734 F 106 91.51 1318 reject_low 7 ALIGNMENT 717 YS2-17k02.q1k chr06 1191 43 185528 186626 C 1149 90.60 1318 accept 0 ALIGNMENT 0 YS2-17k02.q1k chr04 519 847 778834 778833 F 329 0.00 1318 reject_low 3 ALIGNMENT 53 YS2-17k02.q1k chr13 410 526 86940 87056 F 117 98.29 1318 reject_low 1 ALIGNMENT 0 YS2-17k02.q1k chr09 460 62 105827 105826 C 399 0.00 1318 reject_low 2 ALIGNMENT 0 YS2-17k02.q1k chr10 847 460 470048 470047 C 388 0.00 1318 reject_low 8 ALIGNMENT 0 YS2-17k02.q1k chr10 847 518 470038 470037 C 330 0.00 1318 reject_low 5 ALIGNMENT 0 YS2-17k02.q1k chr13 527 847 87056 87055 F 321 0.00 1318 reject_low 1 ALIGNMENT 0 YS2-17k02.q1k chr09 847 461 105771 105770 C 387 0.00 1318 reject_low 6 ALIGNMENT 22 YS2-17k02.q1k chr09 460 411 105770 105819 C 50 100.00 1318 reject_low 6 ALIGNMENT 31 YS2-17k02.q1k chr09 522 461 105765 105826 C 62 100.00 1318 reject_low 2 ALIGNMENT 23 YS2-17k02.q1k chr10 517 460 470037 470094 C 58 98.28 1318 reject_low 5 ALIGNMENT 22 YS2-17k02.q1k chr06 405 456 73350 73401 F 52 92.31 1318 reject_low 4 ALIGNMENT 0 YS2-17k02.q1k chr04 62 411 778729 778728 F 350 0.00 1318 reject_low 3 ALIGNMENT 978 YS2-17k02.p1k chr06 25 1170 181698 182854 F 1146 95.03 1361 accept 0 ALIGNMENT 0 YS2-17k02.q1k chr10 459 62 470095 470094 C 398 0.00 1318 reject_low 5 ALIGNMENT 0 YS2-17k02.q1k chr06 62 404 73350 73349 F 343 0.00 1318 reject_low 4 ALIGNMENT 21 YS2-17k02.q1k chr10 459 412 470047 470094 C 48 100.00 1318 reject_low 8 ALIGNMENT 0 YS2-17k02.q1k chr13 62 409 86940 86939 F 348 0.00 1318 reject_low 1 ALIGNMENT 0 YS2-17k03.q1k vc_7 62 334 13525 13524 F 273 0.00 372 reject_low 7 ALIGNMENT 0 YS2-17k03.q1k vc_1 332 62 2512 2511 C 271 0.00 372 reject_low 2 ALIGNMENT 0 YS2-17k03.q1k vc_2 332 62 2145 2144 C 271 0.00 372 reject_low 3 ALIGNMENT 0 YS2-17k03.q1k chr16 372 333 473380 473379 C 40 0.00 372 accept_chi 0 ALIGNMENT 283 YS2-17k03.q1k chr16 332 39 473379 473672 C 294 99.32 372 accept_chi 0 ALIGNMENT 0 YS2-17k03.q1k vc_5 333 62 5064 5063 C 272 0.00 372 reject_low 6 ALIGNMENT 0 YS2-17k03.q1k vc_5 333 62 37 36 C 272 0.00 372 reject_low 8 ALIGNMENT 36 YS2-17k03.q1k vc_5 369 334 1 36 C 36 100.00 372 reject_low 8 ALIGNMENT 40 YS2-17k03.q1k vc_2 372 333 2105 2144 C 40 100.00 372 reject_low 3 ALIGNMENT 39 YS2-17k03.q1k vc_5 372 334 5025 5063 C 39 100.00 372 reject_low 6 ALIGNMENT 38 YS2-17k03.q1k vc_7 335 372 13525 13562 F 38 100.00 372 reject_low 7 ALIGNMENT 0 YS2-17k03.q1k vc_4 62 332 5832 5831 F 271 0.00 372 reject_low 5 ALIGNMENT 264 YS2-17k03.p1k chr16 28 318 473379 473672 F 291 97.94 337 accept_chi 1 ALIGNMENT 0 YS2-17k03.p1k chr16 319 337 473672 473671 F 19 0.00 337 accept_chi 1 ALIGNMENT 40 YS2-17k03.q1k vc_3 372 333 2472 2511 C 40 100.00 372 reject_low 4 ALIGNMENT 0 YS2-17k03.q1k vc_3 332 62 2512 2511 C 271 0.00 372 reject_low 4 ALIGNMENT 40 YS2-17k03.q1k vc_4 333 372 5832 5871 F 40 100.00 372 reject_low 5 ALIGNMENT 40 YS2-17k03.q1k vc_1 372 333 2472 2511 C 40 100.00 372 reject_low 2 ALIGNMENT 0 YS2-17k04.q1k vc_5 197 62 5068 5067 C 136 0.00 240 reject_low 4 ALIGNMENT 163 YS2-17k04.q1k chr12 37 201 186736 186900 F 165 100.00 240 accept 0 ALIGNMENT 0 YS2-17k04.q1k vc_4 62 199 5831 5830 F 138 0.00 240 reject_low 3 ALIGNMENT 37 YS2-17k04.q1k vc_5 237 198 1 40 C 40 97.50 240 reject_low 6 ALIGNMENT 41 YS2-17k04.q1k vc_3 240 200 2472 2512 C 41 100.00 240 reject_low 2 ALIGNMENT 0 YS2-17k04.q1k vc_5 197 62 41 40 C 136 0.00 240 reject_low 6 ALIGNMENT 40 YS2-17k04.q1k vc_5 240 198 5025 5067 C 43 97.67 240 reject_low 4 ALIGNMENT 41 YS2-17k04.q1k vc_4 200 240 5831 5871 F 41 100.00 240 reject_low 3 ALIGNMENT 38 YS2-17k04.q1k vc_7 203 240 13525 13562 F 38 100.00 240 reject_low 5 ALIGNMENT 0 YS2-17k04.q1k vc_3 199 62 2513 2512 C 138 0.00 240 reject_low 2 ALIGNMENT 0 YS2-17k04.q1k vc_7 62 202 13525 13524 F 141 0.00 240 reject_low 5 ALIGNMENT 0 YS2-17k04.q1k vc_1 199 62 2513 2512 C 138 0.00 240 reject_low 1 ALIGNMENT 41 YS2-17k04.q1k vc_1 240 200 2472 2512 C 41 100.00 240 reject_low 1 ALIGNMENT 0 YS2-17k04.q1k chr12 202 240 186900 186899 F 39 0.00 240 accept 0 ALIGNMENT 0 YS2-17k05.q1k vc_3 847 832 2473 2472 C 16 0.00 1341 reject_low 14 ALIGNMENT 41 YS2-17k05.q1k vc_4 791 831 5831 5871 F 41 100.00 1341 reject_low 9 ALIGNMENT 39 YS2-17k05.q1k vc_5 831 793 5025 5063 C 39 100.00 1341 reject_low 15 ALIGNMENT 0 YS2-17k05.q1k vc_7 1035 1036 5172 6360 C 0 0.00 1341 reject_low 10 ALIGNMENT 0 YS2-17k05.q1k vc_1 62 830 2531 2530 F 769 0.00 1341 reject_low 2 ALIGNMENT 0 YS2-17k05.q1k vc_7 62 793 13525 13524 F 732 0.00 1341 reject_low 17 ALIGNMENT 0 YS2-17k05.q1k vc_2 62 830 2164 2163 F 769 0.00 1341 reject_low 3 ALIGNMENT 0 YS2-17k05.q1k vc_5 847 829 2 1 C 19 0.00 1341 reject_low 18 ALIGNMENT 0 YS2-17k05.q1k vc_3 790 62 2513 2512 C 729 0.00 1341 reject_low 14 ALIGNMENT 38 YS2-17k05.q1k vc_7 794 831 13525 13562 F 38 100.00 1341 reject_low 17 ALIGNMENT 79 YS2-17k05.q1k vc_4 914 831 1450 1534 C 84 98.81 1341 reject_low 11 ALIGNMENT 0 YS2-17k05.p1k chr13 846 830 225009 225008 C 17 0.00 846 accept_chi 1 ALIGNMENT 0 YS2-17k05.q1k vc_4 62 830 126 125 F 769 0.00 1341 reject_low 8 ALIGNMENT 41 YS2-17k05.q1k vc_2 831 791 2105 2145 C 41 100.00 1341 reject_low 13 ALIGNMENT 0 YS2-17k05.q1k vc_7 832 847 100 99 F 16 0.00 1341 reject_low 16 ALIGNMENT 741 YS2-17k05.q1k chr13 26 790 225008 225771 F 765 99.35 1341 accept_chi 0 ALIGNMENT 0 YS2-17k05.q1k vc_5 847 832 5026 5025 C 16 0.00 1341 reject_low 15 ALIGNMENT 87 YS2-17k05.q1k vc_7 1189 1035 5010 5172 C 155 87.10 1341|0,1 reject_low 10 ALIGNMENT 0 YS2-17k05.q1k vc_2 790 62 2146 2145 C 729 0.00 1341 reject_low 13 ALIGNMENT 139 YS2-17k05.q1k vc_4 831 988 126 287 F 158 97.47 1341 reject_low 8 ALIGNMENT 259 YS2-17k05.q1k vc_7 1189 831 2355 2727 C 359 92.48 1341 reject_low 6 ALIGNMENT 0 YS2-17k05.q1k chr13 791 847 225771 225770 F 57 0.00 1341 accept_chi 0 ALIGNMENT 36 YS2-17k05.q1k vc_5 828 793 1 36 C 36 100.00 1341 reject_low 18 ALIGNMENT 259 YS2-17k05.q1k vc_3 831 1189 2531 2903 F 359 92.48 1341 reject_low 4 ALIGNMENT 724 YS2-17k05.p1k chr13 829 63 225008 225771 C 767 98.70 846 accept_chi 1 ALIGNMENT 259 YS2-17k05.q1k vc_5 831 1189 2398 2770 F 359 92.48 1341 reject_low 5 ALIGNMENT 0 YS2-17k05.q1k vc_7 62 793 63 62 F 732 0.00 1341 reject_low 16 ALIGNMENT 0 YS2-17k05.q1k vc_4 830 62 1535 1534 C 769 0.00 1341 reject_low 11 ALIGNMENT 259 YS2-17k05.q1k vc_1 831 1189 2531 2903 F 359 92.48 1341 reject_low 2 ALIGNMENT 0 YS2-17k05.q1k vc_2 847 832 2106 2105 C 16 0.00 1341 reject_low 13 ALIGNMENT 0 YS2-17k05.q1k vc_7 987 62 6412 6411 C 926 0.00 1341 reject_low 10 ALIGNMENT 36 YS2-17k05.q1k vc_7 1036 988 6360 6411 C 49 93.88 1341|1,0 reject_low 10 ALIGNMENT 259 YS2-17k05.q1k vc_2 831 1189 2164 2536 F 359 92.48 1341 reject_low 3 ALIGNMENT 0 YS2-17k05.q1k vc_7 832 847 13562 13561 F 16 0.00 1341 reject_low 17 ALIGNMENT 0 YS2-17k05.q1k vc_4 830 62 5813 5812 C 769 0.00 1341 reject_low 7 ALIGNMENT 252 YS2-17k05.q1k vc_4 1189 831 5438 5812 C 359 91.92 1341 reject_low 7 ALIGNMENT 0 YS2-17k05.q1k vc_5 792 62 5064 5063 C 731 0.00 1341 reject_low 15 ALIGNMENT 0 YS2-17k05.q1k vc_4 832 831 5872 6353 F 0 0.00 1341 reject_low 9 ALIGNMENT 41 YS2-17k05.q1k vc_1 831 791 2472 2512 C 41 100.00 1341 reject_low 12 ALIGNMENT 0 YS2-17k05.q1k vc_7 830 62 2728 2727 C 769 0.00 1341 reject_low 6 ALIGNMENT 0 YS2-17k05.q1k vc_5 62 830 2398 2397 F 769 0.00 1341 reject_low 5 ALIGNMENT 0 YS2-17k05.q1k vc_1 790 62 2513 2512 C 729 0.00 1341 reject_low 12 ALIGNMENT 41 YS2-17k05.q1k vc_3 831 791 2472 2512 C 41 100.00 1341 reject_low 14 ALIGNMENT 0 YS2-17k05.q1k vc_5 792 62 37 36 C 731 0.00 1341 reject_low 18 ALIGNMENT 139 YS2-17k05.q1k vc_4 831 988 6353 6514 F 158 97.47 1341|1,0 reject_low 9 ALIGNMENT 0 YS2-17k05.q1k vc_1 847 832 2473 2472 C 16 0.00 1341 reject_low 12 ALIGNMENT 0 YS2-17k05.q1k vc_4 62 790 5831 5830 F 729 0.00 1341 reject_low 9 ALIGNMENT 38 YS2-17k05.q1k vc_7 794 831 63 100 F 38 100.00 1341 reject_low 16 ALIGNMENT 0 YS2-17k05.q1k vc_3 62 830 2531 2530 F 769 0.00 1341 reject_low 4 ALIGNMENT 0 YS2-17k08.q1k vc_7 62 713 13525 13524 F 652 0.00 751 reject_low 4 ALIGNMENT 0 YS2-17k08.q1k chr14 751 712 512289 512288 C 40 0.00 751 accept 0 ALIGNMENT 37 YS2-17k08.q1k vc_5 748 709 1 40 C 40 97.50 751 reject_low 5 ALIGNMENT 0 YS2-17k08.q1k vc_5 708 62 41 40 C 647 0.00 751 reject_low 5 ALIGNMENT 0 YS2-17k08.q1k vc_5 708 62 5068 5067 C 647 0.00 751 reject_low 2 ALIGNMENT 0 YS2-17k08.q1k vc_7 62 713 63 62 F 652 0.00 751 reject_low 3 ALIGNMENT 0 YS2-17k08.q1k vc_4 62 710 5831 5830 F 649 0.00 751 reject_low 1 ALIGNMENT 38 YS2-17k08.q1k vc_7 714 751 63 100 F 38 100.00 751 reject_low 3 ALIGNMENT 40 YS2-17k08.q1k vc_5 751 709 5025 5067 C 43 97.67 751 reject_low 2 ALIGNMENT 639 YS2-17k08.q1k chr14 711 42 512288 512956 C 670 99.85 751 accept 0 ALIGNMENT 41 YS2-17k08.q1k vc_4 711 751 5831 5871 F 41 100.00 751 reject_low 1 ALIGNMENT 38 YS2-17k08.q1k vc_7 714 751 13525 13562 F 38 100.00 751 reject_low 4 ALIGNMENT 960 YS2-17k09.p1k chr10 1153 29 362320 363449 C 1125 95.56 1325 accept 0 ALIGNMENT 1060 YS2-17k09.q1k chr10 29 1220 359218 360410 F 1192 96.98 1391 accept 0 ALIGNMENT 902 YS2-17k10.p1k chr13 26 1046 368083 369115 F 1021 97.06 1344 accept 0 ALIGNMENT 979 YS2-17k10.q1k chr13 1196 42 369721 370889 C 1155 95.50 1400 accept 0 ALIGNMENT 0 YS2-17k11.p1k chr16 62 316 56169 56168 F 255 0.00 1341 reject_low 5 ALIGNMENT 729 YS2-17k11.q1k chr07 1129 36 288240 289307 C 1094 91.96 1377 accept 0 ALIGNMENT 0 YS2-17k11.p1k chr10 428 831 415956 415955 F 404 0.00 1341 reject_low 3 ALIGNMENT 0 YS2-17k11.p1k chr10 62 312 415842 415841 F 251 0.00 1341 reject_low 3 ALIGNMENT 0 YS2-17k11.p1k chr11 831 435 302552 302551 C 397 0.00 1341 reject_low 2 ALIGNMENT 984 YS2-17k11.p1k chr07 28 1192 287064 288247 F 1165 96.48 1341 accept 0 ALIGNMENT 126 YS2-17k11.p1k chr07 313 459 878711 878857 F 147 95.92 1341 reject_low 1 ALIGNMENT 0 YS2-17k11.p1k chr07 62 312 878711 878710 F 251 0.00 1341 reject_low 1 ALIGNMENT 117 YS2-17k11.p1k chr11 434 313 302551 302672 C 122 99.18 1341 reject_low 2 ALIGNMENT 0 YS2-17k11.p1k chr11 312 62 302673 302672 C 251 0.00 1341 reject_low 2 ALIGNMENT 0 YS2-17k11.p1k chr16 424 831 56275 56274 F 408 0.00 1341 reject_low 5 ALIGNMENT 0 YS2-17k11.p1k chr13 62 312 379298 379297 F 251 0.00 1341 reject_low 4 ALIGNMENT 0 YS2-17k11.p1k chr07 460 831 878857 878856 F 372 0.00 1341 reject_low 1 ALIGNMENT 0 YS2-17k11.p1k chr13 428 831 379412 379411 F 404 0.00 1341 reject_low 4 ALIGNMENT 108 YS2-17k11.p1k chr10 313 427 415842 415956 F 115 98.26 1341 reject_low 3 ALIGNMENT 108 YS2-17k11.p1k chr13 313 427 379298 379412 F 115 98.26 1341 reject_low 4 ALIGNMENT 107 YS2-17k11.p1k chr16 317 423 56169 56275 F 107 100.00 1341 reject_low 5 ALIGNMENT 978 YS2-17k12.q1k chr01 38 1157 74379 75508 F 1120 96.96 1375 accept 0 ALIGNMENT 1009 YS2-17k12.p1k chr01 1153 24 75549 76692 C 1130 97.08 1391 accept 0 ALIGNMENT 0 YS2-17k13.q1k chr15 698 752 933401 933400 F 55 0.00 1340 reject_low 2 ALIGNMENT 0 YS2-17k13.q1k chr15 507 602 933211 933306 F 96 0.00 1340 reject_low 2 ALIGNMENT 128 YS2-17k13.q1k chr04 72 435 1280148 1280511 F 364 78.57 1340 reject_low 1 ALIGNMENT 929 YS2-17k13.p1k chr15 1157 30 623706 624841 C 1128 95.12 1327 accept 0 ALIGNMENT 113 YS2-17k13.q1k chr15 46 506 932750 933210 F 461 75.05 1340 reject_low 2 ALIGNMENT 27 YS2-17k13.q1k chr15 603 697 933307 933401 F 95 76.84 1340 reject_low 2 ALIGNMENT 0 YS2-17k13.q1k chr04 436 752 1280511 1280510 F 317 0.00 1340 reject_low 1 ALIGNMENT 941 YS2-17k13.q1k chr15 28 1174 620712 621869 F 1147 95.12 1340 accept 0 ALIGNMENT 249 YS2-17k14.p1k chr04 282 29 138699 138952 C 254 100.00 395 accept_chi 0 ALIGNMENT 0 YS2-17k14.p1k chr04 395 283 138700 138699 C 113 0.00 395 accept_chi 0 ALIGNMENT 41 YS2-17k14.q1k vc_4 375 415 5831 5871 F 41 100.00 415 reject_low 6 ALIGNMENT 41 YS2-17k14.q1k vc_1 415 375 2472 2512 C 41 100.00 415 reject_low 4 ALIGNMENT 0 YS2-17k14.q1k chr04 375 415 138952 138951 F 41 0.00 415 accept_chi 1 ALIGNMENT 74 YS2-17k14.q1k chr16 28 121 792962 793056 F 94 96.81 415 reject_low 3 ALIGNMENT 0 YS2-17k14.q1k vc_1 374 62 2513 2512 C 313 0.00 415 reject_low 4 ALIGNMENT 0 YS2-17k14.p1k chr16 395 380 792960 792959 C 16 0.00 395 reject_low 2 ALIGNMENT 0 YS2-17k14.q1k chr16 122 415 793056 793055 F 294 0.00 415 reject_low 3 ALIGNMENT 249 YS2-17k14.q1k chr04 121 374 138699 138952 F 254 100.00 415 accept_chi 1 ALIGNMENT 39 YS2-17k14.q1k vc_5 415 377 5025 5063 C 39 100.00 415 reject_low 7 ALIGNMENT 0 YS2-17k14.q1k vc_7 62 377 13525 13524 F 316 0.00 415 reject_low 8 ALIGNMENT 0 YS2-17k14.q1k vc_4 62 374 5831 5830 F 313 0.00 415 reject_low 6 ALIGNMENT 80 YS2-17k14.p1k chr16 379 282 792959 793056 C 98 97.96 395 reject_low 2 ALIGNMENT 0 YS2-17k14.q1k vc_5 376 62 37 36 C 315 0.00 415 reject_low 9 ALIGNMENT 41 YS2-17k14.q1k vc_3 415 375 2472 2512 C 41 100.00 415 reject_low 5 ALIGNMENT 0 YS2-17k14.q1k chr04 62 120 138699 138698 F 59 0.00 415 accept_chi 1 ALIGNMENT 36 YS2-17k14.q1k vc_5 412 377 1 36 C 36 100.00 415 reject_low 9 ALIGNMENT 0 YS2-17k14.q1k vc_5 376 62 5064 5063 C 315 0.00 415 reject_low 7 ALIGNMENT 0 YS2-17k14.q1k vc_3 374 62 2513 2512 C 313 0.00 415 reject_low 5 ALIGNMENT 0 YS2-17k14.p1k chr16 281 62 793057 793056 C 220 0.00 395 reject_low 2 ALIGNMENT 38 YS2-17k14.q1k vc_7 378 415 13525 13562 F 38 100.00 415 reject_low 8 ALIGNMENT 787 YS2-17k15.p1k chr07 1064 32 137598 138626 C 1033 93.03 1371 accept 0 ALIGNMENT 920 YS2-17k15.q1k chr07 22 1142 137055 138193 F 1121 94.92 1315 accept 0 ALIGNMENT 779 YS2-17k16.q1k chr11 1032 39 19662 20652 C 994 94.16 1357 accept 0 ALIGNMENT 936 YS2-17k16.p1k chr11 37 1136 16490 17599 F 1100 96.09 1434 accept 0 ALIGNMENT 956 YS2-17k18.p1k chr12 1128 31 57151 58255 C 1098 96.54 1384 accept 0 ALIGNMENT 908 YS2-17k18.q1k chr12 29 1081 55877 56941 F 1053 96.49 1357 accept 0 ALIGNMENT 999 YS2-17k19.q1k chr13 48 1242 439414 440610 F 1195 95.65 1400 accept 0 ALIGNMENT 23 YS2-17k20.q1k chr04 38 66 436177 436205 F 29 100.00 622 accept 0 reject_low 1 ALIGNMENT 41 YS2-17k20.q1k vc_3 622 582 2472 2512 C 41 100.00 622 reject_low 4 ALIGNMENT 0 YS2-17k20.p1k chr04 590 544 436197 436196 C 47 0.00 590 accept 0 ALIGNMENT 38 YS2-17k20.q1k vc_7 585 622 13525 13562 F 38 100.00 622 reject_low 7 ALIGNMENT 0 YS2-17k20.q1k vc_3 581 62 2513 2512 C 520 0.00 622 reject_low 4 ALIGNMENT 0 YS2-17k20.q1k vc_5 579 62 5068 5067 C 518 0.00 622 reject_low 6 ALIGNMENT 457 YS2-17k20.q1k chr04 67 582 436196 436713 F 516 97.67 622 reject_low 1 ALIGNMENT 0 YS2-17k20.p1k chr04 590 573 436178 436177 C 18 0.00 590 reject_low 2 ALIGNMENT 0 YS2-17k20.q1k vc_1 581 62 2513 2512 C 520 0.00 622 reject_low 3 ALIGNMENT 41 YS2-17k20.q1k vc_1 622 582 2472 2512 C 41 100.00 622 reject_low 3 ALIGNMENT 458 YS2-17k20.p1k chr04 543 28 436196 436713 C 516 97.67 590 accept 0 ALIGNMENT 37 YS2-17k20.q1k vc_5 619 580 1 40 C 40 97.50 622 reject_low 8 ALIGNMENT 0 YS2-17k20.q1k chr04 67 66 436206 436195 F 0 0.00 622 reject_low 1 ALIGNMENT 0 YS2-17k20.q1k chr04 67 622 436205 436204 F 556 0.00 622 accept 0 ALIGNMENT 0 YS2-17k20.q1k vc_4 62 581 5831 5830 F 520 0.00 622 reject_low 5 ALIGNMENT 0 YS2-17k20.q1k chr04 583 622 436713 436712 F 40 0.00 622 reject_low 1 ALIGNMENT 40 YS2-17k20.q1k vc_5 622 580 5025 5067 C 43 97.67 622 reject_low 6 ALIGNMENT 41 YS2-17k20.q1k vc_4 582 622 5831 5871 F 41 100.00 622 reject_low 5 ALIGNMENT 23 YS2-17k20.p1k chr04 572 544 436177 436205 C 29 100.00 590 reject_low 2 ALIGNMENT 0 YS2-17k20.p1k chr04 543 62 436206 436205 C 482 0.00 590 reject_low 2 ALIGNMENT 0 YS2-17k20.q1k vc_7 62 584 13525 13524 F 523 0.00 622 reject_low 7 ALIGNMENT 0 YS2-17k20.q1k vc_5 579 62 41 40 C 518 0.00 622 reject_low 8 ALIGNMENT 773 YS2-17k21.q1k scplasm1 39 1205 1515 2686 F 1167 89.63 1291 accept_chi 0 ALIGNMENT 554 YS2-17k21.p1k vc_6 325 969 5263 5909 F 645 97.05 1310 reject_low 2 ALIGNMENT 0 YS2-17k21.p1k vc_6 62 324 5263 5262 F 263 0.00 1310 reject_low 2 ALIGNMENT 828 YS2-17k21.p1k scplasm1 32 969 5275 6216 F 938 97.65 1310 accept_chi 1 ALIGNMENT 40 YS2-17k23.q1k vc_4 166 205 5832 5871 F 40 100.00 205 reject_vc 6 ALIGNMENT 0 YS2-17k23.q1k chrm 205 139 44229 44228 C 67 0.00 205 ambiguous 9 ALIGNMENT 0 YS2-17k23.q1k chrm 62 113 68601 68600 F 52 0.00 205 ambiguous 12 ALIGNMENT 0 YS2-17k23.p1k chrm 77 106 13628 13627 F 30 0.00 215 accept_chi 0 ALIGNMENT 0 YS2-17k23.q1k chrm 205 165 55491 55490 C 41 0.00 205 reject_low 2 ALIGNMENT 0 YS2-17k23.q1k vc_5 166 62 37 36 C 105 0.00 205 reject_vc 10 ALIGNMENT 0 YS2-17k23.q1k chrm 205 120 13629 13628 C 86 0.00 205 ambiguous 1 ALIGNMENT 36 YS2-17k23.q1k vc_5 202 167 1 36 C 36 100.00 205 reject_vc 10 ALIGNMENT 61 YS2-17k23.q1k chrm 119 30 13628 13717 C 90 97.78 205 ambiguous 1 ALIGNMENT 0 YS2-17k23.q1k chrm 140 62 55514 55513 C 79 0.00 205 reject_low 2 ALIGNMENT 38 YS2-17k23.q1k vc_7 168 205 13525 13562 F 38 100.00 205 reject_vc 8 ALIGNMENT 40 YS2-17k23.q1k vc_1 205 166 2472 2511 C 40 100.00 205 reject_vc 4 ALIGNMENT 21 YS2-17k23.q1k chrm 164 141 55490 55513 C 24 95.83 205 reject_low 2 ALIGNMENT 0 YS2-17k23.q1k chrm 124 62 77924 77923 C 63 0.00 205 ambiguous 11 ALIGNMENT 0 YS2-17k23.q1k chrm 95 62 44271 44270 C 34 0.00 205 ambiguous 9 ALIGNMENT 0 YS2-17k23.q1k chrm 205 163 53713 53712 C 43 0.00 205 ambiguous 3 ALIGNMENT 0 YS2-17k23.q1k chrm 205 158 77892 77891 C 48 0.00 205 ambiguous 11 ALIGNMENT 34 YS2-17k23.p1k chrm 67 109 53715 53757 F 43 95.35 215 reject_low 2 ALIGNMENT 0 YS2-17k23.p1k chrm 110 215 53757 53756 F 106 0.00 215 reject_low 2 ALIGNMENT 24 YS2-17k23.q1k chrm 157 125 77891 77923 C 33 93.94 205 ambiguous 11 ALIGNMENT 27 YS2-17k23.q1k chrm 138 96 44228 44270 C 43 88.37 205 ambiguous 9 ALIGNMENT 43 YS2-17k23.q1k chrm 162 117 53712 53757 C 46 100.00 205 ambiguous 3 ALIGNMENT 0 YS2-17k23.q1k vc_1 165 62 2512 2511 C 104 0.00 205 reject_vc 4 ALIGNMENT 0 YS2-17k23.q1k chrm 139 205 68625 68624 F 67 0.00 205 ambiguous 12 ALIGNMENT 0 YS2-17k23.q1k vc_3 165 62 2512 2511 C 104 0.00 205 reject_vc 5 ALIGNMENT 0 YS2-17k23.q1k chrm 139 205 50739 50738 F 67 0.00 205 ambiguous 13 ALIGNMENT 0 YS2-17k23.q1k chrm 116 62 53758 53757 C 55 0.00 205 ambiguous 3 ALIGNMENT 0 YS2-17k23.q1k chrm 62 116 50718 50717 F 55 0.00 205 ambiguous 13 ALIGNMENT 24 YS2-17k23.q1k chrm 114 138 68601 68625 F 25 100.00 205 ambiguous 12 ALIGNMENT 0 YS2-17k23.q1k vc_4 62 165 5832 5831 F 104 0.00 205 reject_vc 6 ALIGNMENT 0 YS2-17k23.p1k chrm 197 215 13717 13716 F 19 0.00 215 accept_chi 0 ALIGNMENT 0 YS2-17k23.q1k vc_5 166 62 5064 5063 C 105 0.00 205 reject_vc 7 ALIGNMENT 20 YS2-17k23.q1k chrm 117 138 50718 50739 F 22 100.00 205 ambiguous 13 ALIGNMENT 0 YS2-17k23.q1k vc_7 62 167 13525 13524 F 106 0.00 205 reject_vc 8 ALIGNMENT 39 YS2-17k23.q1k vc_5 205 167 5025 5063 C 39 100.00 205 reject_vc 7 ALIGNMENT 40 YS2-17k23.q1k vc_3 205 166 2472 2511 C 40 100.00 205 reject_vc 5 ALIGNMENT 62 YS2-17k23.p1k chrm 107 196 13628 13717 F 90 98.89 215 accept_chi 0 ALIGNMENT 923 YS2-17k24.p1k chr07 31 1095 480562 481627 F 1065 96.15 1324 accept 0 ALIGNMENT 574 YS2-17k24.p1k chr16 1076 50 483990 485017 C 1027 85.69 1324 reject_low 1 ALIGNMENT 950 YS2-17k24.q1k chr07 1226 31 483758 484969 C 1196 94.15 1319 accept 0 ALIGNMENT 41 YS2-17l01.q1k vc_3 348 308 2472 2512 C 41 100.00 348 reject_low 4 ALIGNMENT 0 YS2-17l01.q1k vc_3 307 62 2513 2512 C 246 0.00 348 reject_low 4 ALIGNMENT 201 YS2-17l01.p1k chr12 296 29 460241 460517 C 268 94.03 315 accept_chi 1 ALIGNMENT 211 YS2-17l01.q1k chr12 41 309 460241 460517 F 269 95.17 348 accept_chi 0 ALIGNMENT 0 YS2-17l01.q1k vc_7 62 310 13525 13524 F 249 0.00 348 reject_low 7 ALIGNMENT 0 YS2-17l01.q1k vc_1 307 62 2513 2512 C 246 0.00 348 reject_low 2 ALIGNMENT 38 YS2-17l01.q1k vc_7 311 348 13525 13562 F 38 100.00 348 reject_low 7 ALIGNMENT 0 YS2-17l01.q1k vc_2 307 62 2146 2145 C 246 0.00 348 reject_low 3 ALIGNMENT 41 YS2-17l01.q1k vc_4 308 348 5831 5871 F 41 100.00 348 reject_low 5 ALIGNMENT 0 YS2-17l01.q1k vc_5 309 62 37 36 C 248 0.00 348 reject_low 8 ALIGNMENT 0 YS2-17l01.q1k chr12 310 348 460517 460516 F 39 0.00 348 accept_chi 0 ALIGNMENT 36 YS2-17l01.q1k vc_5 345 310 1 36 C 36 100.00 348 reject_low 8 ALIGNMENT 0 YS2-17l01.q1k vc_4 62 307 5831 5830 F 246 0.00 348 reject_low 5 ALIGNMENT 41 YS2-17l01.q1k vc_1 348 308 2472 2512 C 41 100.00 348 reject_low 2 ALIGNMENT 41 YS2-17l01.q1k vc_2 348 308 2105 2145 C 41 100.00 348 reject_low 3 ALIGNMENT 0 YS2-17l01.q1k vc_5 309 62 5064 5063 C 248 0.00 348 reject_low 6 ALIGNMENT 39 YS2-17l01.q1k vc_5 348 310 5025 5063 C 39 100.00 348 reject_low 6 ALIGNMENT 0 YS2-17l01.p1k chr12 315 297 460242 460241 C 19 0.00 315 accept_chi 1 ALIGNMENT 1032 YS2-17l02.p1k chr16 1217 28 20697 21890 C 1190 96.39 1423 accept 0 ALIGNMENT 940 YS2-17l02.q1k chr16 32 1112 17377 18480 F 1081 96.76 1292 accept 0 ALIGNMENT 0 YS2-17l02.q1k chr15 191 192 1073324 1073348 C 0 0.00 1292 reject_low 1 ALIGNMENT 49 YS2-17l02.q1k chr15 191 117 1073349 1073423 C 75 89.33 1292 reject_low 1 ALIGNMENT 768 YS2-17l02.q1k chr15 1120 192 1072378 1073323 C 929 95.48 1292 reject_low 1 ALIGNMENT 0 YS2-17l02.q1k chr15 116 62 1073424 1073423 C 55 0.00 1292 reject_low 1 ALIGNMENT 888 YS2-17l04.q1k chr13 1104 30 180597 181681 C 1075 94.98 1201 accept 0 ALIGNMENT 973 YS2-17l04.p1k chr13 34 1172 175345 176481 F 1139 95.96 1469 accept 0 ALIGNMENT 928 YS2-17l05.q1k chr15 30 1122 556101 557202 F 1093 95.43 1353 accept 0 ALIGNMENT 948 YS2-17l05.p1k chr15 1086 30 559631 560691 C 1057 96.97 1414 accept 0 ALIGNMENT 933 YS2-17l06.p1k chr10 1076 31 630751 631808 C 1046 97.32 1353 accept 0 ALIGNMENT 980 YS2-17l06.q1k chr10 39 1221 628965 630161 F 1183 95.10 1430 accept 0 ALIGNMENT 0 YS2-17l07.q1k vc_4 62 526 5832 5831 F 465 0.00 566 reject_low 3 ALIGNMENT 0 YS2-17l07.q1k vc_1 526 62 2512 2511 C 465 0.00 566 reject_low 2 ALIGNMENT 248 YS2-17l07.q1k chrm 37 526 45741 46207 F 490 94.29 566 accept_chi 0 ALIGNMENT 0 YS2-17l07.p1k chrm 530 513 45742 45741 C 18 0.00 530 accept_chi 1 ALIGNMENT 40 YS2-17l07.q1k vc_1 566 527 2472 2511 C 40 100.00 566 reject_low 2 ALIGNMENT 40 YS2-17l07.q1k vc_4 527 566 5832 5871 F 40 100.00 566 reject_low 3 ALIGNMENT 0 YS2-17l07.q1k vc_7 62 528 13525 13524 F 467 0.00 566 reject_low 4 ALIGNMENT 243 YS2-17l07.p1k chrm 512 27 45741 46203 C 486 94.03 530 accept_chi 1 ALIGNMENT 0 YS2-17l07.q1k chrm 527 566 46207 46206 F 40 0.00 566 accept_chi 0 ALIGNMENT 38 YS2-17l07.q1k vc_7 529 566 13525 13562 F 38 100.00 566 reject_low 4 ALIGNMENT 0 YS2-17l08.q1k vc_5 442 62 37 36 C 381 0.00 481 reject_vc 5 ALIGNMENT 0 YS2-17l08.q1k vc_3 440 62 2513 2512 C 379 0.00 481 reject_vc 1 ALIGNMENT 0 YS2-17l08.q1k vc_7 62 443 13525 13524 F 382 0.00 481 reject_vc 4 ALIGNMENT 0 YS2-17l08.q1k vc_5 442 62 5064 5063 C 381 0.00 481 reject_vc 3 ALIGNMENT 41 YS2-17l08.q1k vc_4 441 481 5831 5871 F 41 100.00 481 reject_vc 2 ALIGNMENT 38 YS2-17l08.q1k vc_7 444 481 13525 13562 F 38 100.00 481 reject_vc 4 ALIGNMENT 36 YS2-17l08.q1k vc_5 478 443 1 36 C 36 100.00 481 reject_vc 5 ALIGNMENT 39 YS2-17l08.q1k vc_5 481 443 5025 5063 C 39 100.00 481 reject_vc 3 ALIGNMENT 41 YS2-17l08.q1k vc_1 481 441 2472 2512 C 41 100.00 481 reject_vc 0 ALIGNMENT 41 YS2-17l08.q1k vc_3 481 441 2472 2512 C 41 100.00 481 reject_vc 1 ALIGNMENT 0 YS2-17l08.q1k vc_1 440 62 2513 2512 C 379 0.00 481 reject_vc 0 ALIGNMENT 0 YS2-17l08.q1k vc_4 62 440 5831 5830 F 379 0.00 481 reject_vc 2 ALIGNMENT 925 YS2-17l09.q1k chr05 1074 40 351121 352168 C 1035 97.39 1394 accept 0 ALIGNMENT 947 YS2-17l09.p1k chr05 29 1081 345998 347064 F 1053 97.82 1336 accept 0 ALIGNMENT 451 YS2-17l11.p1k vc_3 596 1 1140 1749 C 596 92.79 896 reject_low 5 ALIGNMENT 106 YS2-17l11.q1k vc_7 421 305 4583 4699 C 117 97.44 1031 reject_low 12 ALIGNMENT 0 YS2-17l11.q1k vc_4 237 62 6340 6339 C 176 0.00 1031 reject_low 14 ALIGNMENT 511 YS2-17l11.q1k vc_7 666 1 1901 2569 C 666 92.79 1031 reject_vc 1 ALIGNMENT 0 YS2-17l11.q1k vc_4 237 62 113 112 C 176 0.00 1031 reject_low 13 ALIGNMENT 25 YS2-17l11.p1k vc_1 596 551 9114 9162 C 46 86.96 896 reject_low 9 ALIGNMENT 60 YS2-17l11.q1k vc_4 238 302 1548 1612 F 65 98.46 1031 reject_low 8 ALIGNMENT 511 YS2-17l11.q1k vc_5 1 666 2556 3224 F 666 92.79 1031 reject_vc 0 ALIGNMENT 0 YS2-17l11.q1k vc_7 53 54 5172 6360 C 0 0.00 1031 reject_low 12 ALIGNMENT 0 YS2-17l11.q1k vc_7 304 303 4700 4922 C 2 0.00 1031 reject_low 12 ALIGNMENT 283 YS2-17l11.q1k vc_1 1 302 2689 2990 F 302 98.01 1031 reject_low 9 ALIGNMENT 0 YS2-17l11.q1k vc_4 62 237 1548 1547 F 176 0.00 1031 reject_low 8 ALIGNMENT 60 YS2-17l11.q1k vc_4 302 238 6275 6339 C 65 98.46 1031 reject_low 14 ALIGNMENT 25 YS2-17l11.p1k vc_3 596 551 8385 8433 C 46 86.96 896 reject_low 11 ALIGNMENT 445 YS2-17l11.p1k vc_7 1 596 456 1065 F 596 92.45 896 reject_vc 1 ALIGNMENT 225 YS2-17l11.q1k vc_4 308 666 1879 2240 F 359 88.58 1031 reject_low 8 ALIGNMENT 283 YS2-17l11.q1k vc_2 1 302 2322 2623 F 302 98.01 1031 reject_low 10 ALIGNMENT 48 YS2-17l11.q1k vc_7 54 3 6360 6411 C 52 98.08 1031|1,0 reject_low 12 ALIGNMENT 445 YS2-17l11.p1k vc_7 1 596 13918 14527 F 596 92.45 896 reject_low 6 ALIGNMENT 451 YS2-17l11.p1k vc_1 596 1 1140 1749 C 596 92.79 896 reject_low 3 ALIGNMENT 60 YS2-17l11.q1k vc_4 302 238 48 112 C 65 98.46 1031 reject_low 13 ALIGNMENT 383 YS2-17l11.q1k vc_4 421 1 5232 5654 C 421 97.15 1031 reject_low 7 ALIGNMENT 231 YS2-17l11.q1k vc_7 302 53 4923 5172 C 250 97.60 1031|0,1 reject_low 12 ALIGNMENT 451 YS2-17l11.p1k vc_2 596 1 1140 1749 C 596 92.79 896 reject_low 4 ALIGNMENT 0 YS2-17l11.q1k vc_4 303 307 1613 1878 F 5 0.00 1031 reject_low 8 ALIGNMENT 454 YS2-17l11.p1k vc_6 1 596 3712 4321 F 596 92.95 896 reject_low 2 ALIGNMENT 283 YS2-17l11.q1k vc_3 1 302 2689 2990 F 302 98.01 1031 reject_low 11 ALIGNMENT 25 YS2-17l11.p1k vc_2 596 551 8747 8795 C 46 86.96 896 reject_low 10 ALIGNMENT 454 YS2-17l11.p1k vc_5 596 1 4060 4669 C 596 92.95 896 reject_vc 0 ALIGNMENT 1030 YS2-17l12.q1k chr07 38 1290 704094 705365 F 1253 95.05 1458 accept 0 ALIGNMENT 912 YS2-17l12.p1k chr07 1083 28 704801 705870 C 1056 97.35 1351 accept 0 ALIGNMENT 1042 YS2-17l13.q1k chr05 1187 40 336200 337357 C 1148 97.39 1391 accept 0 ALIGNMENT 915 YS2-17l13.p1k chr05 30 1152 334149 335271 F 1123 94.12 1438 accept 0 ALIGNMENT 999 YS2-17l15.q1k chr04 1250 31 673364 674583 C 1220 94.75 1435 accept 0 ALIGNMENT 829 YS2-17l16.q1k chr10 37 1002 448086 449058 F 966 96.48 1385 accept 0 ALIGNMENT 892 YS2-17l16.p1k chr10 1042 33 450262 451283 C 1010 97.43 1375 accept 0 ALIGNMENT 753 YS2-17l17.q1k chr15 1128 192 1072370 1073323 C 937 94.77 1362 reject_low 1 ALIGNMENT 0 YS2-17l17.q1k chr15 191 192 1073324 1073348 C 0 0.00 1362 reject_low 1 ALIGNMENT 929 YS2-17l17.q1k chr16 31 1128 17377 18498 F 1098 96.08 1362 accept 0 ALIGNMENT 49 YS2-17l17.q1k chr15 191 117 1073349 1073423 C 75 89.33 1362 reject_low 1 ALIGNMENT 0 YS2-17l17.q1k chr15 116 62 1073424 1073423 C 55 0.00 1362 reject_low 1 ALIGNMENT 957 YS2-17l17.p1k chr16 1128 36 20787 21890 C 1093 96.71 1349 accept 0 ALIGNMENT 0 YS2-17l19.p1k vc_6 62 346 5263 5262 F 285 0.00 1393 reject_low 1 ALIGNMENT 938 YS2-17l19.p1k scplasm1 46 1087 5271 6314 F 1042 97.98 1393 accept 0 ALIGNMENT 853 YS2-17l19.q1k scplasm1 1008 2 5300 6318 C 1007 95.83 1182 accept 0 ALIGNMENT 706 YS2-17l19.q1k vc_6 750 1 5263 6012 C 750 99.20 1182 reject_low 2 ALIGNMENT 676 YS2-17l19.p1k vc_6 347 1170 5263 6102 F 824 95.27 1393 reject_low 1 ALIGNMENT 0 YS2-17l20.q1k vc_7 62 379 13525 13524 F 318 0.00 417 reject_low 6 ALIGNMENT 0 YS2-17l20.q1k vc_4 62 377 5832 5831 F 316 0.00 417 reject_low 4 ALIGNMENT 38 YS2-17l20.q1k vc_7 380 417 13525 13562 F 38 100.00 417 reject_low 6 ALIGNMENT 0 YS2-17l20.q1k vc_3 377 62 2512 2511 C 316 0.00 417 reject_low 3 ALIGNMENT 0 YS2-17l20.q1k vc_1 377 62 2512 2511 C 316 0.00 417 reject_low 2 ALIGNMENT 0 YS2-17l20.q1k vc_5 378 62 37 36 C 317 0.00 417 reject_low 7 ALIGNMENT 36 YS2-17l20.q1k vc_5 414 379 1 36 C 36 100.00 417 reject_low 7 ALIGNMENT 0 YS2-17l20.q1k chr05 417 378 414695 414694 C 40 0.00 417 accept_chi 1 ALIGNMENT 39 YS2-17l20.q1k vc_5 417 379 5025 5063 C 39 100.00 417 reject_low 5 ALIGNMENT 331 YS2-17l20.q1k chr05 377 28 414694 415044 C 350 99.14 417 accept_chi 1 ALIGNMENT 40 YS2-17l20.q1k vc_4 378 417 5832 5871 F 40 100.00 417 reject_low 4 ALIGNMENT 336 YS2-17l20.p1k chr05 27 377 414694 415044 F 351 99.43 382 accept_chi 0 ALIGNMENT 0 YS2-17l20.q1k vc_5 378 62 5064 5063 C 317 0.00 417 reject_low 5 ALIGNMENT 40 YS2-17l20.q1k vc_3 417 378 2472 2511 C 40 100.00 417 reject_low 3 ALIGNMENT 40 YS2-17l20.q1k vc_1 417 378 2472 2511 C 40 100.00 417 reject_low 2 ALIGNMENT 0 YS2-17l22.q1k scplasm1 538 62 2956 2955 C 477 0.00 1371 accept 0 ALIGNMENT 387 YS2-17l22.q1k scplasm1 1222 539 2264 2955 C 684 85.96 1371 accept 0 ALIGNMENT 934 YS2-17l24.q1k chr10 1125 31 342554 343670 C 1095 96.16 1268 accept 0 ALIGNMENT 933 YS2-17l24.p1k chr10 28 1094 339684 340744 F 1067 96.63 1297 accept 0 ALIGNMENT 0 YS2-17m01.p1k chr16 257 885 839317 839316 F 629 0.00 1343 reject_low 1 ALIGNMENT 920 YS2-17m01.q1k chr07 1124 35 765013 766127 C 1090 96.51 1286 accept 0 ALIGNMENT 926 YS2-17m01.p1k chr07 58 1162 764987 766106 F 1105 95.93 1343 accept 0 ALIGNMENT 112 YS2-17m01.p1k chr16 58 256 839122 839317 F 199 85.93 1343 reject_low 1 ALIGNMENT 1000 YS2-17m02.q1k chr16 1160 28 82627 83771 C 1133 96.20 1342 accept 0 ALIGNMENT 967 YS2-17m02.p1k chr16 32 1235 78535 79736 F 1204 94.35 1389 accept 0 ALIGNMENT 1005 YS2-17m03.p1k chr16 1226 61 370960 372137 C 1166 96.14 1376 accept 0 ALIGNMENT 1009 YS2-17m03.q1k chr16 39 1214 367710 368905 F 1176 96.51 1298 accept 0 ALIGNMENT 39 YS2-17m04.q1k vc_5 297 259 5025 5063 C 39 100.00 297 reject_low 5 ALIGNMENT 38 YS2-17m04.q1k vc_7 260 297 13525 13562 F 38 100.00 297 reject_low 6 ALIGNMENT 36 YS2-17m04.q1k vc_5 294 259 1 36 C 36 100.00 297 reject_low 7 ALIGNMENT 41 YS2-17m04.q1k vc_3 297 253 2472 2516 C 45 97.78 297 reject_low 3 ALIGNMENT 41 YS2-17m04.q1k vc_1 297 253 2472 2516 C 45 97.78 297 reject_low 2 ALIGNMENT 211 YS2-17m04.q1k chr02 256 31 99256 99480 C 226 98.67 297 accept_chi 1 ALIGNMENT 0 YS2-17m04.p1k chr02 253 271 99480 99479 F 19 0.00 271 accept_chi 0 ALIGNMENT 0 YS2-17m04.q1k vc_4 62 252 5827 5826 F 191 0.00 297 reject_low 4 ALIGNMENT 0 YS2-17m04.q1k vc_3 252 62 2517 2516 C 191 0.00 297 reject_low 3 ALIGNMENT 0 YS2-17m04.q1k chr02 297 257 99257 99256 C 41 0.00 297 accept_chi 1 ALIGNMENT 0 YS2-17m04.q1k vc_5 258 62 37 36 C 197 0.00 297 reject_low 7 ALIGNMENT 218 YS2-17m04.p1k chr02 28 252 99256 99480 F 225 99.56 271 accept_chi 0 ALIGNMENT 0 YS2-17m04.q1k vc_5 258 62 5064 5063 C 197 0.00 297 reject_low 5 ALIGNMENT 0 YS2-17m04.q1k vc_1 252 62 2517 2516 C 191 0.00 297 reject_low 2 ALIGNMENT 41 YS2-17m04.q1k vc_4 253 297 5827 5871 F 45 97.78 297 reject_low 4 ALIGNMENT 0 YS2-17m04.q1k vc_7 62 259 13525 13524 F 198 0.00 297 reject_low 6 ALIGNMENT 912 YS2-17m06.q1k chr07 1056 39 734281 735304 C 1018 97.64 1286 accept 0 ALIGNMENT 1002 YS2-17m06.p1k chr07 30 1167 733735 734871 F 1138 96.49 1472 accept 0 ALIGNMENT 874 YS2-17m07.p1k chr05 39 1052 451944 452969 F 1014 96.55 1323 accept 0 ALIGNMENT 1011 YS2-17m07.q1k chr05 1198 38 456121 457288 C 1161 95.95 1333 accept 0 ALIGNMENT 933 YS2-17m08.q1k chr12 40 1102 1046572 1047641 F 1063 96.99 1347 accept 0 ALIGNMENT 914 YS2-17m08.p1k chr12 1118 32 1047386 1048493 C 1087 96.04 1417 accept 0 ALIGNMENT 912 YS2-17m09.p1k chr05 1078 28 380881 381940 C 1051 96.00 1315 accept 0 ALIGNMENT 1048 YS2-17m09.q1k chr05 29 1267 377550 378804 F 1239 95.64 1336 accept 0 ALIGNMENT 996 YS2-17m10.p1k chr07 1121 34 559404 560495 C 1088 97.43 1420 accept 0 ALIGNMENT 985 YS2-17m10.q1k chr07 30 1207 558793 559985 F 1178 95.50 1363 accept 0 ALIGNMENT 854 YS2-17m12.q1k chr16 994 29 148661 149641 C 966 96.48 1159 accept 0 ALIGNMENT 915 YS2-17m14.q1k chr02 32 1047 489369 490398 F 1016 97.05 1293 accept 0 ALIGNMENT 906 YS2-17m14.p1k chr02 1121 22 494095 495209 C 1100 95.18 1319 accept 0 ALIGNMENT 852 YS2-17m15.q1k chr08 41 1046 347738 348769 F 1006 96.72 1293 accept 0 ALIGNMENT 845 YS2-17m16.p1k chr12 25 988 755840 756816 F 964 96.99 1304 accept 0 ALIGNMENT 966 YS2-17m16.q1k chr12 1167 38 760840 761991 C 1130 96.11 1406 accept 0 ALIGNMENT 999 YS2-17m17.q1k chr02 1188 37 320814 321965 C 1152 96.70 1339 accept 0 ALIGNMENT 896 YS2-17m18.q1k chr07 1066 38 167490 168530 C 1029 96.21 1354 accept 0 ALIGNMENT 20 YS2-17m19.q1k chr05 926 900 407052 407078 C 27 100.00 1325 reject_low 1 ALIGNMENT 1030 YS2-17m19.q1k chr02 1253 40 649912 651137 C 1214 95.63 1325 accept 0 ALIGNMENT 0 YS2-17m19.q1k chr05 899 62 407079 407078 C 838 0.00 1325 reject_low 1 ALIGNMENT 888 YS2-17m20.p1k chr09 31 1046 416788 417807 F 1016 96.56 1371 accept 0 ALIGNMENT 960 YS2-17m20.q1k chr09 1241 49 419294 420496 C 1193 94.55 1382 accept 0 ALIGNMENT 859 YS2-17m23.q1k chr12 1093 46 457958 459019 C 1048 95.32 1204 accept 0 ALIGNMENT 859 YS2-17m23.q1k chr12 1093 46 467095 468156 C 1048 95.32 1204 accept 1 ALIGNMENT 413 YS2-17m24.p1k chr16 82 584 89202 89700 F 503 95.83 1011 accept 0 ALIGNMENT 966 YS2-17m24.q1k chr16 1178 36 92841 93985 C 1143 95.98 1369 accept 0 ALIGNMENT 0 YS2-17n01.p1k chr13 643 661 108020 108019 F 19 0.00 661 accept_chi 1 ALIGNMENT 39 YS2-17n01.q1k vc_5 677 639 5025 5063 C 39 100.00 677 reject_low 5 ALIGNMENT 41 YS2-17n01.q1k vc_3 677 637 2472 2512 C 41 100.00 677 reject_low 3 ALIGNMENT 41 YS2-17n01.q1k vc_4 637 677 5831 5871 F 41 100.00 677 reject_low 4 ALIGNMENT 0 YS2-17n01.q1k vc_1 636 62 2513 2512 C 575 0.00 677 reject_low 2 ALIGNMENT 0 YS2-17n01.q1k chr13 677 638 107423 107422 C 40 0.00 677 accept_chi 0 ALIGNMENT 41 YS2-17n01.q1k vc_1 677 637 2472 2512 C 41 100.00 677 reject_low 2 ALIGNMENT 0 YS2-17n01.q1k vc_7 62 639 13525 13524 F 578 0.00 677 reject_low 6 ALIGNMENT 569 YS2-17n01.p1k chr13 53 642 107431 108020 F 590 99.49 661 accept_chi 1 ALIGNMENT 0 YS2-17n01.q1k vc_3 636 62 2513 2512 C 575 0.00 677 reject_low 3 ALIGNMENT 38 YS2-17n01.q1k vc_7 640 677 13525 13562 F 38 100.00 677 reject_low 6 ALIGNMENT 0 YS2-17n01.q1k vc_4 62 636 5831 5830 F 575 0.00 677 reject_low 4 ALIGNMENT 0 YS2-17n01.q1k vc_5 638 62 37 36 C 577 0.00 677 reject_low 7 ALIGNMENT 0 YS2-17n01.q1k vc_5 638 62 5064 5063 C 577 0.00 677 reject_low 5 ALIGNMENT 36 YS2-17n01.q1k vc_5 674 639 1 36 C 36 100.00 677 reject_low 7 ALIGNMENT 576 YS2-17n01.q1k chr13 637 38 107422 108020 C 600 99.50 677 accept_chi 0 ALIGNMENT 962 YS2-17n02.p1k chr02 1167 31 328780 329930 C 1137 95.69 1388 accept 0 ALIGNMENT 976 YS2-17n02.q1k chr02 30 1218 328653 329857 F 1189 95.37 1348 accept 0 ALIGNMENT 916 YS2-17n03.q1k chr07 39 1088 251311 252370 F 1050 95.81 1318 accept 0 ALIGNMENT 953 YS2-17n03.p1k chr07 1126 60 255556 256626 C 1067 97.19 1428 accept 0 ALIGNMENT 244 YS2-17n04.q1k vc_7 303 53 4922 5172 C 251 99.20 814|0,1 reject_vc 8 ALIGNMENT 299 YS2-17n04.q1k vc_1 1 303 2689 2991 F 303 99.67 814 reject_vc 4 ALIGNMENT 378 YS2-17n04.q1k vc_4 420 1 5232 5654 C 420 97.14 814 reject_vc 3 ALIGNMENT 0 YS2-17n04.q1k vc_7 53 54 5172 6360 C 0 0.00 814 reject_vc 8 ALIGNMENT 0 YS2-17n04.q1k vc_7 304 304 4700 4921 C 1 0.00 814 reject_vc 8 ALIGNMENT 0 YS2-17n04.q1k vc_4 237 62 6340 6339 C 176 0.00 814 reject_low 10 ALIGNMENT 65 YS2-17n04.q1k vc_4 304 238 6273 6339 C 67 100.00 814 reject_low 10 ALIGNMENT 299 YS2-17n04.q1k vc_3 1 303 2689 2991 F 303 99.67 814 reject_vc 6 ALIGNMENT 0 YS2-17n04.q1k vc_4 305 307 1615 1878 F 3 0.00 814 reject_vc 7 ALIGNMENT 65 YS2-17n04.q1k vc_4 304 238 46 112 C 67 100.00 814 reject_low 9 ALIGNMENT 0 YS2-17n04.q1k vc_4 62 237 1548 1547 F 176 0.00 814 reject_vc 7 ALIGNMENT 84 YS2-17n04.q1k vc_7 420 305 4583 4699 C 116 92.24 814 reject_vc 8 ALIGNMENT 299 YS2-17n04.q1k vc_2 1 303 2322 2624 F 303 99.67 814 reject_vc 5 ALIGNMENT 51 YS2-17n04.q1k vc_7 54 3 6360 6411 C 52 100.00 814|1,0 reject_vc 8 ALIGNMENT 428 YS2-17n04.q1k vc_7 552 1 2011 2569 C 552 93.30 814 reject_vc 2 ALIGNMENT 437 YS2-17n04.q1k vc_5 1 639 2556 3206 F 639 90.30 814 reject_vc 1 ALIGNMENT 0 YS2-17n04.p1k chrm 328 346 43767 43766 F 19 0.00 346 accept 0 ALIGNMENT 65 YS2-17n04.q1k vc_4 238 304 1548 1614 F 67 100.00 814 reject_vc 7 ALIGNMENT 0 YS2-17n04.q1k vc_4 237 62 113 112 C 176 0.00 814 reject_low 9 ALIGNMENT 131 YS2-17n04.q1k vc_4 308 639 1879 2222 F 332 81.63 814 reject_vc 7 ALIGNMENT 249 YS2-17n04.p1k chrm 27 327 43466 43767 F 301 99.67 346 accept 0 ALIGNMENT 973 YS2-17n05.p1k chr01 30 1127 103767 104875 F 1098 97.63 1363 accept 0 ALIGNMENT 974 YS2-17n05.q1k chr01 1182 30 107213 108382 C 1153 95.84 1334 accept 0 ALIGNMENT 990 YS2-17n06.q1k scplasm1 1193 38 3811 4972 C 1156 96.37 1380 accept 0 ALIGNMENT 171 YS2-17n06.p1k scplasm1 1 309 940 1255 F 309 84.14 565 accept 0 ALIGNMENT 349 YS2-17n06.q1k scplasm1 697 1193 341 842 F 497 91.75 1380 reject_low 1 ALIGNMENT 0 YS2-17n06.q1k vc_6 62 696 6352 6351 F 635 0.00 1380 reject_low 2 ALIGNMENT 178 YS2-17n06.q1k vc_6 697 880 6352 6535 F 184 100.00 1380 reject_low 2 ALIGNMENT 0 YS2-17n06.q1k scplasm1 62 696 341 340 F 635 0.00 1380 reject_low 1 ALIGNMENT 0 YS2-17n07.q1k chr04 146 853 390509 390508 F 708 0.00 1277 reject_low 1 ALIGNMENT 0 YS2-17n07.q1k chr16 62 97 650495 650494 F 36 0.00 1277 reject_low 2 ALIGNMENT 0 YS2-17n07.q1k chr12 62 97 701210 701209 F 36 0.00 1277 reject_low 3 ALIGNMENT 0 YS2-17n07.q1k chr05 147 853 81239 81238 F 707 0.00 1277 reject_low 4 ALIGNMENT 875 YS2-17n07.q1k chr07 1071 37 466762 467817 C 1035 96.71 1277 accept 0 ALIGNMENT 23 YS2-17n07.q1k chr05 105 146 81198 81239 F 42 100.00 1277 reject_low 4 ALIGNMENT 0 YS2-17n07.q1k chr04 62 81 390446 390445 F 20 0.00 1277 reject_low 1 ALIGNMENT 0 YS2-17n07.q1k chr05 62 104 81198 81197 F 43 0.00 1277 reject_low 4 ALIGNMENT 935 YS2-17n07.p1k chr07 29 1096 463305 464376 F 1068 96.07 1414 accept 0 ALIGNMENT 0 YS2-17n07.q1k chr12 146 853 701257 701256 F 708 0.00 1277 reject_low 3 ALIGNMENT 28 YS2-17n07.q1k chr16 98 151 650495 650548 F 54 96.30 1277 reject_low 2 ALIGNMENT 27 YS2-17n07.q1k chr04 82 145 390446 390509 F 64 89.06 1277 reject_low 1 ALIGNMENT 23 YS2-17n07.q1k chr12 98 145 701210 701257 F 48 95.83 1277 reject_low 3 ALIGNMENT 0 YS2-17n07.q1k chr16 152 853 650548 650547 F 702 0.00 1277 reject_low 2 ALIGNMENT 925 YS2-17n08.p1k chr02 18 1089 774260 775348 F 1072 96.55 1378 accept 0 ALIGNMENT 875 YS2-17n08.q1k chr02 1019 29 774441 775449 C 991 96.97 1276 accept 0 ALIGNMENT 165 YS2-17n09.p1k vc_6 483 667 6352 6535 F 185 98.38 1388 reject_low 4 ALIGNMENT 923 YS2-17n09.p1k scplasm1 1076 24 3714 4772 C 1053 96.39 1388 accept_chi 0 ALIGNMENT 390 YS2-17n09.q1k vc_6 41 445 5609 6013 F 405 100.00 445 reject_vc 2 ALIGNMENT 0 YS2-17n09.p1k vc_6 668 848 6535 6534 F 181 0.00 1388 reject_low 4 ALIGNMENT 496 YS2-17n09.p1k scplasm1 483 1121 341 985 F 639 92.96 1388 reject_low 1 ALIGNMENT 388 YS2-17n09.q1k scplasm1 41 443 5916 6318 F 403 100.00 445 accept_chi 3 ALIGNMENT 0 YS2-17n09.p1k scplasm1 62 482 341 340 F 421 0.00 1388 reject_low 1 ALIGNMENT 0 YS2-17n09.p1k vc_6 62 482 6352 6351 F 421 0.00 1388 reject_low 4 ALIGNMENT 931 YS2-17n10.p1k chr13 28 1164 542943 544077 F 1137 95.25 1426 accept 0 ALIGNMENT 924 YS2-17n10.q1k chr13 1135 39 547100 548218 C 1097 96.35 1320 accept 0 ALIGNMENT 1030 YS2-17n11.q1k chr02 38 1216 17658 18846 F 1179 96.78 1431 accept 0 ALIGNMENT 932 YS2-17n12.p1k chr05 1261 47 58961 60157 C 1215 93.91 1487 accept 0 ALIGNMENT 935 YS2-17n12.q1k chr05 37 1141 57617 58741 F 1105 95.29 1364 accept 0 ALIGNMENT 969 YS2-17n13.p1k chr04 1097 30 545379 546458 C 1068 97.47 1365 accept 0 ALIGNMENT 939 YS2-17n13.q1k chr04 31 1108 542992 544079 F 1078 95.92 1341 accept 0 ALIGNMENT 36 YS2-17n14.q1k vc_5 359 324 1 36 C 36 100.00 362 reject_low 7 ALIGNMENT 41 YS2-17n14.q1k vc_3 362 322 2472 2512 C 41 100.00 362 reject_low 3 ALIGNMENT 0 YS2-17n14.q1k chr15 362 322 673619 673618 C 41 0.00 362 accept_chi 1 ALIGNMENT 0 YS2-17n14.q1k vc_5 323 62 5064 5063 C 262 0.00 362 reject_low 5 ALIGNMENT 41 YS2-17n14.q1k vc_4 322 362 5831 5871 F 41 100.00 362 reject_low 4 ALIGNMENT 38 YS2-17n14.q1k vc_7 325 362 13525 13562 F 38 100.00 362 reject_low 6 ALIGNMENT 0 YS2-17n14.q1k vc_5 323 62 37 36 C 262 0.00 362 reject_low 7 ALIGNMENT 0 YS2-17n14.q1k vc_3 321 62 2513 2512 C 260 0.00 362 reject_low 3 ALIGNMENT 264 YS2-17n14.q1k chr15 321 29 673618 673910 C 293 97.95 362 accept_chi 1 ALIGNMENT 0 YS2-17n14.q1k vc_1 321 62 2513 2512 C 260 0.00 362 reject_low 2 ALIGNMENT 39 YS2-17n14.q1k vc_5 362 324 5025 5063 C 39 100.00 362 reject_low 5 ALIGNMENT 41 YS2-17n14.q1k vc_1 362 322 2472 2512 C 41 100.00 362 reject_low 2 ALIGNMENT 0 YS2-17n14.q1k vc_4 62 321 5831 5830 F 260 0.00 362 reject_low 4 ALIGNMENT 0 YS2-17n14.q1k vc_7 62 324 13525 13524 F 263 0.00 362 reject_low 6 ALIGNMENT 268 YS2-17n14.p1k chr15 27 324 673618 673913 F 298 97.99 329 accept_chi 0 ALIGNMENT 968 YS2-17n15.q1k chr10 1180 34 720037 721195 C 1147 95.47 1429 accept 0 ALIGNMENT 0 YS2-17n16.q1k chr12 765 885 811796 811795 F 121 0.00 1311 reject_low 1 ALIGNMENT 911 YS2-17n16.q1k chr07 37 1048 549397 550417 F 1012 97.13 1311 accept 0 ALIGNMENT 202 YS2-17n16.p1k chr12 1018 500 814652 815170 C 519 79.77 1404 reject_low 1 ALIGNMENT 978 YS2-17n16.p1k chr07 1143 32 552844 553966 C 1112 96.40 1404 accept 0 ALIGNMENT 263 YS2-17n16.q1k chr12 69 764 811101 811796 F 696 80.03 1311 reject_low 1 ALIGNMENT 0 YS2-17n16.p1k chr12 499 62 815171 815170 C 438 0.00 1404 reject_low 1 ALIGNMENT 457 YS2-17n17.p1k chr06 954 45 184449 185360 C 910 83.63 1241 accept 0 ALIGNMENT 0 YS2-17n22.q1k chr13 750 62 196985 196984 C 689 0.00 1303 reject_low 19 ALIGNMENT 0 YS2-17n22.q1k chr02 750 62 260224 260223 C 689 0.00 1303 reject_low 13 ALIGNMENT 79 YS2-17n22.q1k chr05 751 1036 497763 498057 F 286 76.57 1303 reject_low 21 ALIGNMENT 857 YS2-17n22.q1k chr15 39 1036 708664 709670 F 998 96.39 1303 ambiguous_trans 8 ALIGNMENT 0 YS2-17n22.q1k chr12 62 750 481246 481245 F 689 0.00 1303 reject_low 18 ALIGNMENT 21 YS2-17n22.q1k chr13 570 515 185010 185065 C 56 80.36 1303 reject_low 22 ALIGNMENT 0 YS2-17n22.q1k chr05 62 514 497515 497514 F 453 0.00 1303 reject_low 21 ALIGNMENT 79 YS2-17n22.q1k chr15 1036 751 595174 595468 C 286 76.22 1303 reject_low 15 ALIGNMENT 875 YS2-17n22.q1k chr07 39 1036 573345 574351 F 998 96.99 1303 ambiguous_trans 2 ALIGNMENT 860 YS2-17n22.q1k chr04 1036 39 872169 873175 C 998 96.49 1303 ambiguous_trans 5 ALIGNMENT 0 YS2-17n22.q1k chr16 62 750 855897 855896 F 689 0.00 1303 reject_low 20 ALIGNMENT 851 YS2-17n22.q1k chr04 1036 39 981518 982524 C 998 96.19 1303 ambiguous_trans 10 ALIGNMENT 74 YS2-17n22.q1k chr10 929 751 472852 473030 C 179 80.45 1303 reject_low 17 ALIGNMENT 860 YS2-17n22.q1k chr03 1036 39 85163 86169 C 998 96.49 1303 ambiguous_trans 4 ALIGNMENT 872 YS2-17n22.q1k chr14 39 1036 566633 567639 F 998 96.89 1303 ambiguous_trans 3 ALIGNMENT 74 YS2-17n22.q1k chr13 929 751 196806 196984 C 179 80.45 1303 reject_low 19 ALIGNMENT 79 YS2-17n22.q1k chr12 751 1036 220353 220647 F 286 76.57 1303 reject_low 14 ALIGNMENT 842 YS2-17n22.q1k chr15 1036 39 970635 971641 C 998 95.89 1303 ambiguous_trans 12 ALIGNMENT 857 YS2-17n22.q1k chr07 1036 39 811805 812811 C 998 96.39 1303 ambiguous_trans 7 ALIGNMENT 74 YS2-17n22.q1k chr12 751 929 481246 481424 F 179 80.45 1303 reject_low 18 ALIGNMENT 878 YS2-17n22.q1k chr12 1036 39 941542 942548 C 998 97.09 1303 ambiguous_trans 1 ALIGNMENT 21 YS2-17n22.q1k chr05 515 570 497515 497570 F 56 80.36 1303 reject_low 21 ALIGNMENT 845 YS2-17n22.q1k chr02 1036 39 29994 31000 C 998 95.99 1303 ambiguous_trans 11 ALIGNMENT 0 YS2-17n22.q1k chr13 514 62 185066 185065 C 453 0.00 1303 reject_low 22 ALIGNMENT 0 YS2-17n22.q1k chr10 750 62 473031 473030 C 689 0.00 1303 reject_low 17 ALIGNMENT 857 YS2-17n22.q1k chr06 1036 39 138261 139267 C 998 96.39 1303 ambiguous_trans 6 ALIGNMENT 0 YS2-17n22.q1k chr15 750 62 595469 595468 C 689 0.00 1303 reject_low 15 ALIGNMENT 878 YS2-17n22.q1k chr04 39 1036 518284 519290 F 998 97.09 1303 ambiguous_trans 0 ALIGNMENT 0 YS2-17n22.q1k chr13 750 571 184818 185009 C 180 0.00 1303 reject_low 22 ALIGNMENT 79 YS2-17n22.q1k chr13 1036 751 184523 184817 C 286 76.22 1303 reject_low 22 ALIGNMENT 74 YS2-17n22.q1k chr16 751 929 855897 856075 F 179 80.45 1303 reject_low 20 ALIGNMENT 0 YS2-17n22.q1k chr05 571 750 497571 497762 F 180 0.00 1303 reject_low 21 ALIGNMENT 0 YS2-17n22.q1k chr05 62 750 448664 448663 F 689 0.00 1303 reject_low 16 ALIGNMENT 854 YS2-17n22.q1k chr12 39 1036 980337 981343 F 998 96.29 1303 ambiguous_trans 9 ALIGNMENT 74 YS2-17n22.q1k chr05 751 929 448664 448842 F 179 80.45 1303 reject_low 16 ALIGNMENT 79 YS2-17n22.q1k chr02 1036 751 259929 260223 C 286 76.22 1303 reject_low 13 ALIGNMENT 0 YS2-17n22.q1k chr12 62 750 220353 220352 F 689 0.00 1303 reject_low 14 ALIGNMENT 0 YS2-17n23.q1k chr15 855 111 354035 354034 C 745 0.00 1381 reject_low 6 ALIGNMENT 72 YS2-17n23.q1k chr02 39 125 266385 266472 F 87 95.40 1381 reject_low 1 ALIGNMENT 0 YS2-17n23.q1k chr04 855 113 434254 434253 C 743 0.00 1381 reject_low 3 ALIGNMENT 0 YS2-17n23.q1k chr02 126 855 266472 266471 F 730 0.00 1381 reject_low 1 ALIGNMENT 0 YS2-17n23.q1k chr14 855 106 560694 560693 C 750 0.00 1381 reject_low 10 ALIGNMENT 939 YS2-17n23.q1k chr15 39 1114 113808 114879 F 1076 96.75 1381 accept 0 ALIGNMENT 0 YS2-17n23.q1k chr08 855 111 116097 116096 C 745 0.00 1381 reject_low 5 ALIGNMENT 0 YS2-17n23.q1k chr09 112 855 175107 175106 F 744 0.00 1381 reject_low 7 ALIGNMENT 72 YS2-17n23.q1k chr15 110 39 354034 354105 C 72 100.00 1381 reject_low 6 ALIGNMENT 892 YS2-17n23.p1k chr15 1197 34 116354 117515 C 1164 93.56 1241 accept 0 ALIGNMENT 70 YS2-17n23.q1k chr09 39 111 175035 175107 F 73 98.63 1381 reject_low 7 ALIGNMENT 71 YS2-17n23.q1k chr04 112 39 434253 434326 C 74 98.65 1381 reject_low 3 ALIGNMENT 0 YS2-17n23.q1k chr10 855 121 59085 59084 C 735 0.00 1381 reject_low 2 ALIGNMENT 68 YS2-17n23.q1k chr10 120 39 59084 59165 C 82 95.12 1381 reject_low 2 ALIGNMENT 0 YS2-17n23.q1k chr14 106 855 104878 104877 F 750 0.00 1381 reject_low 9 ALIGNMENT 0 YS2-17n23.q1k chr09 112 855 325825 325824 F 744 0.00 1381 reject_low 8 ALIGNMENT 72 YS2-17n23.q1k chr03 39 110 295487 295558 F 72 100.00 1381 reject_low 4 ALIGNMENT 67 YS2-17n23.q1k chr14 105 39 560693 560759 C 67 100.00 1381 reject_low 10 ALIGNMENT 72 YS2-17n23.q1k chr08 110 39 116096 116167 C 72 100.00 1381 reject_low 5 ALIGNMENT 67 YS2-17n23.q1k chr14 39 105 104812 104878 F 67 100.00 1381 reject_low 9 ALIGNMENT 0 YS2-17n23.q1k chr03 111 855 295558 295557 F 745 0.00 1381 reject_low 4 ALIGNMENT 70 YS2-17n23.q1k chr09 39 111 325753 325825 F 73 98.63 1381 reject_low 8 ALIGNMENT 0 YS2-17n24.q1k vc_4 306 308 1615 1878 F 3 0.00 777 reject_low 12 ALIGNMENT 42 YS2-17n24.q1k vc_4 305 239 46 112 C 67 88.06 777 reject_low 13 ALIGNMENT 352 YS2-17n24.q1k vc_7 501 1 2067 2569 C 501 90.42 777 reject_low 1 ALIGNMENT 354 YS2-17n24.q1k vc_5 1 620 2556 3188 F 620 86.45 777 reject_vc 0 ALIGNMENT 258 YS2-17n24.q1k vc_2 1 304 2322 2624 F 304 95.39 777 reject_low 9 ALIGNMENT 42 YS2-17n24.q1k vc_4 239 305 1548 1614 F 67 88.06 777 reject_low 12 ALIGNMENT 48 YS2-17n24.q1k vc_7 54 3 6360 6411 C 52 98.08 777|1,0 reject_low 11 ALIGNMENT 258 YS2-17n24.q1k vc_1 1 304 2689 2991 F 304 95.39 777 reject_low 8 ALIGNMENT 195 YS2-17n24.p1k vc_2 338 1 1409 1749 C 338 86.09 574 reject_low 3 ALIGNMENT 195 YS2-17n24.p1k vc_6 1 338 3712 4052 F 338 86.09 574 reject_low 5 ALIGNMENT 195 YS2-17n24.p1k vc_3 338 1 1409 1749 C 338 86.09 574 reject_low 4 ALIGNMENT 195 YS2-17n24.p1k vc_7 1 338 13918 14258 F 338 86.09 574 reject_low 6 ALIGNMENT 320 YS2-17n24.q1k vc_4 415 1 5239 5654 C 415 92.77 777 reject_low 7 ALIGNMENT 195 YS2-17n24.p1k vc_5 338 1 4329 4669 C 338 86.09 574 reject_vc 0 ALIGNMENT 0 YS2-17n24.q1k vc_7 305 305 4700 4921 C 1 0.00 777 reject_low 11 ALIGNMENT 258 YS2-17n24.q1k vc_3 1 304 2689 2991 F 304 95.39 777 reject_low 10 ALIGNMENT 0 YS2-17n24.q1k vc_7 53 54 5172 6360 C 0 0.00 777 reject_low 11 ALIGNMENT 207 YS2-17n24.q1k vc_7 304 53 4922 5172 C 252 94.44 777|0,1 reject_low 11 ALIGNMENT 195 YS2-17n24.p1k vc_7 1 338 456 796 F 338 86.09 574 reject_low 1 ALIGNMENT 90 YS2-17n24.q1k vc_4 309 620 1879 2204 F 312 77.56 777 reject_low 12 ALIGNMENT 67 YS2-17n24.q1k vc_7 415 306 4590 4699 C 110 87.27 777 reject_low 11 ALIGNMENT 42 YS2-17n24.q1k vc_4 305 239 6273 6339 C 67 88.06 777 reject_low 14 ALIGNMENT 195 YS2-17n24.p1k vc_1 338 1 1409 1749 C 338 86.09 574 reject_low 2 ALIGNMENT 128 YS2-17o02.p1k chr15 187 377 962363 962551 F 191 90.05 1461 accept 0 ALIGNMENT 244 YS2-17o02.p1k vc_7 397 987 13564 14149 F 591 81.90 1461 reject_low 6 ALIGNMENT 117 YS2-17o02.p1k vc_6 629 987 3586 3943 F 359 79.11 1461 reject_low 8 ALIGNMENT 244 YS2-17o02.p1k vc_7 397 987 102 687 F 591 81.90 1461 reject_low 5 ALIGNMENT 244 YS2-17o02.p1k vc_5 987 397 4438 5023 C 591 81.90 1461 reject_low 4 ALIGNMENT 244 YS2-17o02.p1k vc_2 987 397 1518 2103 C 591 81.90 1461 reject_low 2 ALIGNMENT 244 YS2-17o02.p1k vc_3 987 397 1518 2103 C 591 81.90 1461 reject_low 3 ALIGNMENT 165 YS2-17o02.p1k vc_4 397 755 5873 6226 F 359 83.57 1461 reject_low 7 ALIGNMENT 244 YS2-17o02.p1k vc_1 987 397 1518 2103 C 591 81.90 1461 reject_low 1 ALIGNMENT 965 YS2-17o03.p1k chr12 36 1142 455681 456796 F 1107 96.39 1356 accept 0 ALIGNMENT 754 YS2-17o03.q1k chr12 1249 37 467278 468457 C 1213 90.11 1334 accept 0,1 ALIGNMENT 965 YS2-17o03.p1k chr12 36 1142 464818 465933 F 1107 96.39 1356 accept 1 ALIGNMENT 746 YS2-17o03.q1k chr12 1166 37 458228 459320 C 1130 91.42 1334 reject_low 2 ALIGNMENT 847 YS2-17o04.p1k chr15 1019 30 128894 129896 C 990 97.07 1286 accept 0 ALIGNMENT 0 YS2-17o04.q1k chr04 104 62 1444502 1444501 C 43 0.00 1368 reject_low 1 ALIGNMENT 259 YS2-17o04.q1k chr04 849 105 1443757 1444501 C 745 79.06 1368 reject_low 1 ALIGNMENT 973 YS2-17o04.q1k chr15 38 1165 124959 126099 F 1128 96.01 1368 accept 0 ALIGNMENT 41 YS2-17o05.q1k vc_1 577 537 2472 2512 C 41 100.00 577 reject_low 2 ALIGNMENT 0 YS2-17o05.q1k chr16 577 540 206675 206674 C 38 0.00 577 accept_chi 0 ALIGNMENT 0 YS2-17o05.q1k vc_3 536 62 2513 2512 C 475 0.00 577 reject_low 3 ALIGNMENT 0 YS2-17o05.q1k vc_5 538 62 37 36 C 477 0.00 577 reject_low 7 ALIGNMENT 41 YS2-17o05.q1k vc_4 537 577 5831 5871 F 41 100.00 577 reject_low 4 ALIGNMENT 0 YS2-17o05.q1k vc_4 62 536 5831 5830 F 475 0.00 577 reject_low 4 ALIGNMENT 36 YS2-17o05.q1k vc_5 574 539 1 36 C 36 100.00 577 reject_low 7 ALIGNMENT 39 YS2-17o05.q1k vc_5 577 539 5025 5063 C 39 100.00 577 reject_low 5 ALIGNMENT 0 YS2-17o05.q1k vc_5 538 62 5064 5063 C 477 0.00 577 reject_low 5 ALIGNMENT 0 YS2-17o05.q1k vc_1 536 62 2513 2512 C 475 0.00 577 reject_low 2 ALIGNMENT 468 YS2-17o05.q1k chr16 539 27 206674 207188 C 513 98.05 577 accept_chi 0 ALIGNMENT 0 YS2-17o05.q1k vc_7 62 539 13525 13524 F 478 0.00 577 reject_low 6 ALIGNMENT 453 YS2-17o05.p1k chr16 32 544 206674 207188 F 513 97.08 563 accept_chi 1 ALIGNMENT 41 YS2-17o05.q1k vc_3 577 537 2472 2512 C 41 100.00 577 reject_low 3 ALIGNMENT 0 YS2-17o05.p1k chr16 545 563 207188 207187 F 19 0.00 563 accept_chi 1 ALIGNMENT 38 YS2-17o05.q1k vc_7 540 577 13525 13562 F 38 100.00 577 reject_low 6 ALIGNMENT 45 YS2-17o07.q1k scplasm1 77 1 6234 6318 C 77 89.61 289 accept 0 ALIGNMENT 45 YS2-17o08.q1k chrm 42 131 52296 52382 F 90 87.78 266 reject_low 8 ALIGNMENT 44 YS2-17o08.q1k chrm 145 82 3036 3101 C 64 90.62 266 reject_low 10 ALIGNMENT 44 YS2-17o08.q1k chrm 76 164 80 169 F 89 87.64 266 reject_low 5 ALIGNMENT 0 YS2-17o08.q1k chrm 132 266 52382 52381 F 135 0.00 266 reject_low 8 ALIGNMENT 47 YS2-17o08.q1k chrm 163 82 8992 9073 C 82 89.02 266 reject_low 3 ALIGNMENT 0 YS2-17o08.q1k chrm 266 136 80491 80490 C 131 0.00 266 reject_low 15 ALIGNMENT 53 YS2-17o08.q1k chrm 131 42 8228 8317 C 90 88.89 266 reject_low 6 ALIGNMENT 0 YS2-17o08.q1k chrm 266 129 69440 69439 C 138 0.00 266 reject_low 16 ALIGNMENT 49 YS2-17o08.q1k chrm 43 132 2712 2802 F 90 87.78 266 reject_low 7 ALIGNMENT 49 YS2-17o08.q1k chrm 127 63 34283 34349 C 65 93.85 266 reject_low 13 ALIGNMENT 52 YS2-17o08.q1k chrm 132 51 11038 11120 C 82 89.02 266 reject_low 9 ALIGNMENT 161 YS2-17o08.q1k chrm 225 39 34833 35019 C 187 100.00 266 accept 0 ALIGNMENT 0 YS2-17o08.q1k chrm 266 128 34284 34283 C 139 0.00 266 reject_low 13 ALIGNMENT 43 YS2-17o08.q1k chrm 129 82 2089 2136 C 48 97.92 266 reject_low 19 ALIGNMENT 49 YS2-17o08.q1k chrm 128 70 69439 69496 C 59 96.61 266 reject_low 16 ALIGNMENT 0 YS2-17o08.q1k chrm 266 131 69048 69047 C 136 0.00 266 reject_low 18 ALIGNMENT 48 YS2-17o08.q1k chrm 135 77 80490 80549 C 59 94.92 266 reject_low 15 ALIGNMENT 0 YS2-17o08.q1k chrm 266 146 3037 3036 C 121 0.00 266 reject_low 10 ALIGNMENT 0 YS2-17o08.q1k chrm 266 124 81405 81404 C 143 0.00 266 reject_low 17 ALIGNMENT 0 YS2-17o08.q1k vc_7 62 228 13525 13524 F 167 0.00 266 reject_low 2 ALIGNMENT 0 YS2-17o08.q1k chrm 266 130 46310 46309 C 137 0.00 266 reject_low 20 ALIGNMENT 0 YS2-17o08.q1k chrm 133 266 2802 2801 F 134 0.00 266 reject_low 7 ALIGNMENT 48 YS2-17o08.q1k chrm 130 70 69047 69106 C 61 95.08 266 reject_low 18 ALIGNMENT 0 YS2-17o08.q1k chrm 266 143 50093 50092 C 124 0.00 266 reject_low 4 ALIGNMENT 0 YS2-17o08.q1k vc_3 225 62 2513 2512 C 164 0.00 266 reject_low 1 ALIGNMENT 0 YS2-17o08.q1k chrm 266 133 11039 11038 C 134 0.00 266 reject_low 9 ALIGNMENT 0 YS2-17o08.q1k chrm 165 266 169 168 F 102 0.00 266 reject_low 5 ALIGNMENT 52 YS2-17o08.q1k chrm 77 132 9485 9540 F 56 98.21 266 reject_low 14 ALIGNMENT 0 YS2-17o08.q1k chrm 62 76 9485 9484 F 15 0.00 266 reject_low 14 ALIGNMENT 0 YS2-17o08.q1k chrm 133 266 9540 9539 F 134 0.00 266 reject_low 14 ALIGNMENT 0 YS2-17o08.q1k chrm 266 132 8229 8228 C 135 0.00 266 reject_low 6 ALIGNMENT 0 YS2-17o08.q1k chrm 266 138 76582 76581 C 129 0.00 266 reject_low 11 ALIGNMENT 45 YS2-17o08.q1k chrm 123 64 81404 81461 C 60 95.00 266 reject_low 17 ALIGNMENT 0 YS2-17o08.q1k chrm 132 266 12318 12317 F 135 0.00 266 reject_low 12 ALIGNMENT 43 YS2-17o08.q1k chrm 129 82 46309 46356 C 48 97.92 266 reject_low 20 ALIGNMENT 0 YS2-17o08.q1k chrm 81 62 9074 9073 C 20 0.00 266 reject_low 3 ALIGNMENT 47 YS2-17o08.q1k chrm 56 131 12246 12318 F 76 89.47 266 reject_low 12 ALIGNMENT 38 YS2-17o08.q1k vc_7 229 266 13525 13562 F 38 100.00 266 reject_low 2 ALIGNMENT 0 YS2-17o08.q1k chrm 266 164 8993 8992 C 103 0.00 266 reject_low 3 ALIGNMENT 0 YS2-17o08.q1k chrm 81 62 2137 2136 C 20 0.00 266 reject_low 19 ALIGNMENT 55 YS2-17o08.q1k chrm 137 77 76581 76641 C 61 96.72 266 reject_low 11 ALIGNMENT 0 YS2-17o08.q1k chrm 266 226 34834 34833 C 41 0.00 266 accept 0 ALIGNMENT 0 YS2-17o08.q1k chrm 76 62 76642 76641 C 15 0.00 266 reject_low 11 ALIGNMENT 0 YS2-17o08.q1k chrm 76 62 80550 80549 C 15 0.00 266 reject_low 15 ALIGNMENT 67 YS2-17o08.q1k chrm 142 47 50092 50188 C 96 91.67 266 reject_low 4 ALIGNMENT 41 YS2-17o08.q1k vc_3 266 226 2472 2512 C 41 100.00 266 reject_low 1 ALIGNMENT 0 YS2-17o08.q1k chrm 81 62 3102 3101 C 20 0.00 266 reject_low 10 ALIGNMENT 0 YS2-17o08.q1k chrm 81 62 46357 46356 C 20 0.00 266 reject_low 20 ALIGNMENT 0 YS2-17o08.q1k chrm 266 130 2090 2089 C 137 0.00 266 reject_low 19 ALIGNMENT 0 YS2-17o09.p1k chr12 77 177 451419 451418 F 101 0.00 1355 reject_low 1 ALIGNMENT 880 YS2-17o09.q1k chr12 1046 29 464354 465386 C 1018 96.66 1271 accept 0 ALIGNMENT 510 YS2-17o09.p1k chr12 533 1198 489754 490429 F 666 92.79 1355 reject_low 2 ALIGNMENT 0 YS2-17o09.p1k chr12 77 532 489754 489753 F 456 0.00 1355 reject_low 2 ALIGNMENT 880 YS2-17o09.q1k chr12 1046 29 455217 456249 C 1018 96.66 1271 reject_low 1 ALIGNMENT 895 YS2-17o09.p1k chr12 56 1198 460434 461598 F 1143 94.05 1355 accept 0 ALIGNMENT 797 YS2-17o09.p1k chr12 178 1198 451419 452461 F 1021 93.93 1355 reject_low 1 ALIGNMENT 0 YS2-17o10.q1k chr04 62 550 427493 427492 F 489 0.00 672 reject_low 3 ALIGNMENT 0 YS2-17o10.p1k chr04 694 677 426865 426864 C 18 0.00 694 reject_low 1 ALIGNMENT 81 YS2-17o10.q1k chr04 551 672 427439 427560 F 122 92.62 672 reject_low 2 ALIGNMENT 0 YS2-17o10.q1k chr04 62 550 427439 427438 F 489 0.00 672 reject_low 2 ALIGNMENT 37 YS2-17o10.p1k chr04 101 42 427385 427444 C 60 91.67 694 reject_low 5 ALIGNMENT 0 YS2-17o10.q1k chr04 634 672 427575 427574 F 39 0.00 672 reject_low 3 ALIGNMENT 597 YS2-17o10.p1k chr04 676 36 426864 427505 C 641 98.91 694 reject_low 1 ALIGNMENT 0 YS2-17o10.q1k chr04 62 604 427385 427384 F 543 0.00 672 reject_low 4 ALIGNMENT 0 YS2-17o10.p1k chr04 694 156 427440 427439 C 539 0.00 694 accept 0 ALIGNMENT 53 YS2-17o10.p1k chr04 155 73 427493 427575 C 83 91.57 694 reject_low 2 ALIGNMENT 0 YS2-17o10.p1k chr04 694 156 427494 427493 C 539 0.00 694 reject_low 2 ALIGNMENT 78 YS2-17o10.p1k chr04 155 36 427439 427559 C 120 92.50 694 accept 0 ALIGNMENT 600 YS2-17o10.q1k chr04 30 672 426864 427506 F 643 98.91 672 accept 0 ALIGNMENT 37 YS2-17o10.q1k chr04 605 664 427385 427444 F 60 91.67 672 reject_low 4 ALIGNMENT 0 YS2-17o10.p1k chr04 694 102 427386 427385 C 593 0.00 694 reject_low 5 ALIGNMENT 53 YS2-17o10.q1k chr04 551 633 427493 427575 F 83 91.57 672 reject_low 3 ALIGNMENT 882 YS2-17o11.q1k chr04 37 1065 605904 606946 F 1029 97.38 1284 accept 0 ALIGNMENT 1000 YS2-17o11.p1k chr04 1217 56 607498 608667 C 1162 96.13 1380 accept 0 ALIGNMENT 0 YS2-17o12.q1k chr01 382 62 224676 224675 C 321 0.00 1338 reject_low 1 ALIGNMENT 990 YS2-17o12.p1k chr10 42 1220 722010 723203 F 1179 95.42 1411 accept 0 ALIGNMENT 0 YS2-17o12.q1k chr01 850 508 224552 224551 C 343 0.00 1338 reject_low 1 ALIGNMENT 956 YS2-17o12.q1k chr10 1154 40 725673 726802 C 1115 96.32 1338 accept 0 ALIGNMENT 56 YS2-17o12.q1k chr01 507 383 224551 224675 C 125 81.60 1338 reject_low 1 ALIGNMENT 0 YS2-17o13.p1k chr07 656 328 1004220 1004219 C 329 0.00 1330 reject_low 2 ALIGNMENT 0 YS2-17o13.p1k chr08 250 62 467063 467062 C 189 0.00 1330 reject_low 3 ALIGNMENT 71 YS2-17o13.p1k chr16 324 245 744282 744360 C 80 97.50 1330 reject_low 1 ALIGNMENT 0 YS2-17o13.p1k chr08 656 325 466991 466990 C 332 0.00 1330 reject_low 3 ALIGNMENT 0 YS2-17o13.p1k chr16 244 62 744361 744360 C 183 0.00 1330 reject_low 1 ALIGNMENT 62 YS2-17o13.p1k chr08 324 251 466990 467062 C 74 95.95 1330 reject_low 3 ALIGNMENT 70 YS2-17o13.p1k chr07 327 252 1004219 1004293 C 76 98.68 1330 reject_low 2 ALIGNMENT 0 YS2-17o13.p1k chr07 251 62 1004294 1004293 C 190 0.00 1330 reject_low 2 ALIGNMENT 0 YS2-17o13.p1k chr16 656 325 744283 744282 C 332 0.00 1330 reject_low 1 ALIGNMENT 778 YS2-17o13.p1k chr07 995 47 661085 662031 C 949 95.79 1330 accept 0 ALIGNMENT 938 YS2-17o13.q1k chr07 40 1118 658215 659305 F 1079 97.13 1306 accept 0 ALIGNMENT 912 YS2-17o14.p1k chr13 31 1113 779238 780316 F 1083 95.48 1479 accept 0 ALIGNMENT 903 YS2-17o14.q1k chr13 1102 38 780323 781402 C 1065 96.15 1332 accept 0 ALIGNMENT 0 YS2-17o15.q1k chr03 62 506 82699 82698 F 445 0.00 1341 reject_low 18 ALIGNMENT 0 YS2-17o15.q1k chr01 506 62 166164 166163 C 445 0.00 1341 reject_low 20 ALIGNMENT 0 YS2-17o15.q1k chr03 900 782 142804 142803 C 119 0.00 1341 reject_low 22 ALIGNMENT 117 YS2-17o15.q1k chr03 829 507 168604 168928 C 323 81.11 1341 reject_low 23 ALIGNMENT 100 YS2-17o15.q1k chr03 558 817 149531 149786 F 260 82.31 1341 reject_low 24 ALIGNMENT 0 YS2-17o15.q1k chr03 716 62 83177 83176 C 655 0.00 1341 reject_low 25 ALIGNMENT 199 YS2-17o15.q1k chr04 507 818 1095762 1096079 F 312 90.06 1341 reject_low 16 ALIGNMENT 0 YS2-17o15.q1k chr07 816 900 817387 817386 F 85 0.00 1341 reject_low 26 ALIGNMENT 0 YS2-17o15.q1k chr01 900 830 160249 160248 C 71 0.00 1341 reject_low 19 ALIGNMENT 176 YS2-17o15.q1k chr01 829 507 165836 166163 C 323 86.38 1341 reject_low 20 ALIGNMENT 0 YS2-17o15.q1k chr13 62 504 184168 184167 F 443 0.00 1341 reject_low 5 ALIGNMENT 176 YS2-17o15.q1k chr01 829 507 160248 160575 C 323 86.38 1341 reject_low 19 ALIGNMENT 0 YS2-17o15.q1k chr08 506 62 543942 543941 C 445 0.00 1341 reject_low 11 ALIGNMENT 0 YS2-17o15.q1k chr14 506 62 96942 96941 C 445 0.00 1341 reject_low 1 ALIGNMENT 0 YS2-17o15.q1k chr04 819 900 1096079 1096078 F 82 0.00 1341 reject_low 16 ALIGNMENT 0 YS2-17o15.q1k chr02 62 506 221040 221039 F 445 0.00 1341 reject_low 12 ALIGNMENT 0 YS2-17o15.q1k chr03 900 830 168605 168604 C 71 0.00 1341 reject_low 23 ALIGNMENT 48 YS2-17o15.q1k chr07 715 815 817289 817387 F 101 85.15 1341 reject_low 26 ALIGNMENT 0 YS2-17o15.q1k chr15 62 506 600403 600402 F 445 0.00 1341 reject_low 10 ALIGNMENT 153 YS2-17o15.q1k chr03 781 507 142803 143077 C 275 87.27 1341 reject_low 22 ALIGNMENT 223 YS2-17o15.q1k chr13 826 507 362598 362917 C 320 91.56 1341 reject_low 7 ALIGNMENT 176 YS2-17o15.q1k chr12 829 507 475984 476311 C 323 86.38 1341 reject_low 21 ALIGNMENT 0 YS2-17o15.q1k chr08 900 819 549327 549326 C 82 0.00 1341 reject_low 13 ALIGNMENT 0 YS2-17o15.q1k chr03 762 62 151518 151517 C 701 0.00 1341 reject_low 27 ALIGNMENT 0 YS2-17o15.q1k chr03 504 62 124465 124464 C 443 0.00 1341 reject_low 6 ALIGNMENT 0 YS2-17o15.q1k chr10 900 829 541020 541019 C 72 0.00 1341 reject_low 28 ALIGNMENT 0 YS2-17o15.q1k chr13 506 62 357336 357335 C 445 0.00 1341 reject_low 2 ALIGNMENT 227 YS2-17o15.q1k chr14 839 507 96609 96941 C 333 90.99 1341 reject_low 1 ALIGNMENT 0 YS2-17o15.q1k chr10 835 834 541007 541344 F 0 0.00 1341 accept 0 ALIGNMENT 0 YS2-17o15.q1k chr15 819 900 595132 595131 F 82 0.00 1341 reject_low 9 ALIGNMENT 0 YS2-17o15.q1k chr02 827 900 221361 221360 F 74 0.00 1341 reject_low 12 ALIGNMENT 0 YS2-17o15.q1k chr08 900 819 543631 543630 C 82 0.00 1341 reject_low 11 ALIGNMENT 0 YS2-17o15.q1k chr12 900 819 215102 215101 C 82 0.00 1341 reject_low 17 ALIGNMENT 0 YS2-17o15.q1k chr04 62 506 1095762 1095761 F 445 0.00 1341 reject_low 16 ALIGNMENT 0 YS2-17o15.q1k chr03 900 830 124141 124140 C 71 0.00 1341 reject_low 6 ALIGNMENT 0 YS2-17o15.q1k chr10 506 62 541342 541341 C 445 0.00 1341 reject_low 28 ALIGNMENT 0 YS2-17o15.q1k chr13 506 62 362918 362917 C 445 0.00 1341 reject_low 7 ALIGNMENT 0 YS2-17o15.q1k chr07 62 714 817289 817288 F 653 0.00 1341 reject_low 26 ALIGNMENT 29 YS2-17o15.q1k chr03 815 763 151466 151517 C 53 88.68 1341 reject_low 27 ALIGNMENT 177 YS2-17o15.q1k chr03 507 839 82699 83036 F 333 85.89 1341 reject_low 18 ALIGNMENT 0 YS2-17o15.q1k chr15 819 900 600714 600713 F 82 0.00 1341 reject_low 10 ALIGNMENT 222 YS2-17o15.q1k chr07 818 507 817418 817729 C 312 92.31 1341 reject_low 8 ALIGNMENT 0 YS2-17o15.q1k chr14 900 840 96610 96609 C 61 0.00 1341 reject_low 1 ALIGNMENT 60 YS2-17o15.q1k chr10 664 507 541184 541341 C 158 81.01 1341 reject_low 28 ALIGNMENT 216 YS2-17o15.q1k chr02 507 826 221040 221361 F 320 90.94 1341 reject_low 12 ALIGNMENT 0 YS2-17o15.q1k chr12 506 62 215419 215418 C 445 0.00 1341 reject_low 17 ALIGNMENT 208 YS2-17o15.q1k chr03 507 828 151518 151838 F 322 90.06 1341 reject_low 14 ALIGNMENT 0 YS2-17o15.q1k chr03 62 506 151518 151517 F 445 0.00 1341 reject_low 14 ALIGNMENT 222 YS2-17o15.q1k chr15 507 818 600403 600714 F 312 92.31 1341 reject_low 10 ALIGNMENT 78 YS2-17o15.q1k chr03 839 717 83053 83176 C 123 89.43 1341 reject_low 25 ALIGNMENT 0 YS2-17o15.q1k chr12 900 830 475985 475984 C 71 0.00 1341 reject_low 21 ALIGNMENT 51 YS2-17o15.q1k chr10 828 715 541019 541131 C 114 83.33 1341 reject_low 28 ALIGNMENT 0 YS2-17o15.q1k chr15 62 506 594821 594820 F 445 0.00 1341 reject_low 9 ALIGNMENT 221 YS2-17o15.q1k chr13 505 818 184168 184481 F 314 92.04 1341 reject_low 5 ALIGNMENT 226 YS2-17o15.q1k chr14 829 507 102201 102523 C 323 91.64 1341 reject_low 4 ALIGNMENT 216 YS2-17o15.q1k chr08 818 507 549326 549637 C 312 91.67 1341 reject_low 13 ALIGNMENT 0 YS2-17o15.q1k chr16 840 900 560810 560809 F 61 0.00 1341 reject_low 3 ALIGNMENT 0 YS2-17o15.q1k chr03 818 900 149786 149785 F 83 0.00 1341 reject_low 24 ALIGNMENT 0 YS2-17o15.q1k chr12 506 62 476312 476311 C 445 0.00 1341 reject_low 21 ALIGNMENT 0 YS2-17o15.q1k chr03 506 62 168929 168928 C 445 0.00 1341 reject_low 23 ALIGNMENT 0 YS2-17o15.q1k chr07 829 900 536091 536090 F 72 0.00 1341 reject_low 15 ALIGNMENT 208 YS2-17o15.q1k chr07 507 828 535764 536091 F 322 90.06 1341 reject_low 15 ALIGNMENT 0 YS2-17o15.q1k chr14 506 62 102524 102523 C 445 0.00 1341 reject_low 4 ALIGNMENT 0 YS2-17o15.q1k chr14 900 830 102202 102201 C 71 0.00 1341 reject_low 4 ALIGNMENT 0 YS2-17o15.q1k chr03 506 62 143078 143077 C 445 0.00 1341 reject_low 22 ALIGNMENT 0 YS2-17o15.q1k chr13 819 900 184481 184480 F 82 0.00 1341 reject_low 5 ALIGNMENT 718 YS2-17o15.q1k chr10 39 836 540211 541008 F 798 97.99 1341|0,2 accept 0 ALIGNMENT 0 YS2-17o15.q1k chr07 506 62 817730 817729 C 445 0.00 1341 reject_low 8 ALIGNMENT 0 YS2-17o15.q1k chr03 829 900 151838 151837 F 72 0.00 1341 reject_low 14 ALIGNMENT 199 YS2-17o15.q1k chr12 818 507 215101 215418 C 312 90.06 1341 reject_low 17 ALIGNMENT 0 YS2-17o15.q1k chr07 900 819 817419 817418 C 82 0.00 1341 reject_low 8 ALIGNMENT 0 YS2-17o15.q1k chr10 714 665 541132 541183 C 50 0.00 1341 reject_low 28 ALIGNMENT 222 YS2-17o15.q1k chr15 507 818 594821 595132 F 312 92.31 1341 reject_low 9 ALIGNMENT 0 YS2-17o15.q1k chr03 62 557 149531 149530 F 496 0.00 1341 reject_low 24 ALIGNMENT 0 YS2-17o15.q1k chr13 900 840 357004 357003 C 61 0.00 1341 reject_low 2 ALIGNMENT 0 YS2-17o15.q1k chr03 900 840 83054 83053 C 61 0.00 1341 reject_low 25 ALIGNMENT 0 YS2-17o15.q1k chr03 840 900 83036 83035 F 61 0.00 1341 reject_low 18 ALIGNMENT 281 YS2-17o15.q1k chr10 832 1257 541342 541775 F 426 90.61 1341|3,0 accept 0 ALIGNMENT 0 YS2-17o15.q1k chr08 506 62 549638 549637 C 445 0.00 1341 reject_low 13 ALIGNMENT 221 YS2-17o15.q1k chr16 507 839 560478 560810 F 333 90.39 1341 reject_low 3 ALIGNMENT 0 YS2-17o15.q1k chr07 62 506 535764 535763 F 445 0.00 1341 reject_low 15 ALIGNMENT 0 YS2-17o15.q1k chr01 506 62 160576 160575 C 445 0.00 1341 reject_low 19 ALIGNMENT 0 YS2-17o15.q1k chr01 900 830 165837 165836 C 71 0.00 1341 reject_low 20 ALIGNMENT 224 YS2-17o15.q1k chr13 839 507 357003 357335 C 333 90.69 1341 reject_low 2 ALIGNMENT 0 YS2-17o15.q1k chr13 900 827 362599 362598 C 74 0.00 1341 reject_low 7 ALIGNMENT 217 YS2-17o15.q1k chr03 829 505 124140 124464 C 325 90.46 1341 reject_low 6 ALIGNMENT 0 YS2-17o15.q1k chr16 62 506 560478 560477 F 445 0.00 1341 reject_low 3 ALIGNMENT 0 YS2-17o15.q1k chr03 900 816 151467 151466 C 85 0.00 1341 reject_low 27 ALIGNMENT 219 YS2-17o15.q1k chr08 818 507 543630 543941 C 312 91.99 1341 reject_low 11 ALIGNMENT 972 YS2-17o17.q1k chr03 40 1148 246121 247245 F 1109 96.48 1248 accept 0 ALIGNMENT 1025 YS2-17o20.q1k chr12 1131 36 461992 463093 C 1096 97.99 1374 accept 0 ALIGNMENT 557 YS2-17o20.p1k chr12 40 948 460084 461025 F 909 89.44 1279 accept 0 ALIGNMENT 1025 YS2-17o20.q1k chr12 1131 36 452855 453956 C 1096 97.99 1374 reject_low 1 ALIGNMENT 0 YS2-17o20.p1k chr12 62 487 451419 451418 F 426 0.00 1279 reject_low 1 ALIGNMENT 252 YS2-17o20.p1k chr12 488 948 451419 451888 F 461 87.85 1279 reject_low 1 ALIGNMENT 27 YS2-17o22.q1k chr16 1099 1058 62885 62929 C 42 90.48 1334 reject_low 1 ALIGNMENT 550 YS2-17o22.q1k chr16 64 973 63065 63965 F 910 88.24 1334 accept 0 ALIGNMENT 0 YS2-17o22.q1k chr16 1057 62 62930 62929 C 996 0.00 1334 reject_low 1 ALIGNMENT 921 YS2-17o24.q1k chr08 1108 38 420754 421834 C 1071 95.70 1318 accept 0 ALIGNMENT 888 YS2-17o24.p1k chr08 30 1115 417764 418843 F 1086 94.75 1260 accept 0 ALIGNMENT 919 YS2-17p01.p1k chr15 1183 32 89971 91135 C 1152 94.10 1381 accept 0 ALIGNMENT 913 YS2-17p01.q1k chr15 42 1135 86577 87687 F 1094 96.44 1291 accept 0 ALIGNMENT 984 YS2-17p02.p1k chr10 32 1156 465467 466604 F 1125 96.44 1367 accept 0 ALIGNMENT 973 YS2-17p02.q1k chr10 1140 41 466183 467293 C 1100 96.91 1284 accept 0 ALIGNMENT 1006 YS2-17p03.q1k chr10 43 1219 504068 505262 F 1177 96.26 1370 accept 0 ALIGNMENT 953 YS2-17p03.p1k chr10 1137 26 506731 507848 C 1112 96.04 1359 accept 0 ALIGNMENT 896 YS2-17p04.p1k chr09 35 1095 402696 403770 F 1061 95.95 1350 accept 0 ALIGNMENT 969 YS2-17p04.q1k chr09 1170 39 406970 408114 C 1132 95.14 1363 accept 0 ALIGNMENT 1013 YS2-17p08.q1k chr04 1197 41 288701 289869 C 1157 96.72 1354 accept 0 ALIGNMENT 926 YS2-17p08.p1k chr04 33 1099 284191 285270 F 1067 96.72 1346 accept 0 ALIGNMENT 0 YS2-17p09.q1k vc_7 62 359 13525 13524 F 298 0.00 397 reject_low 6 ALIGNMENT 0 YS2-17p09.q1k vc_3 356 62 2513 2512 C 295 0.00 397 reject_low 3 ALIGNMENT 0 YS2-17p09.q1k vc_4 62 356 5831 5830 F 295 0.00 397 reject_low 4 ALIGNMENT 0 YS2-17p09.q1k chr12 358 397 141288 141287 F 40 0.00 397 accept_chi 0 ALIGNMENT 41 YS2-17p09.q1k vc_4 357 397 5831 5871 F 41 100.00 397 reject_low 4 ALIGNMENT 0 YS2-17p09.p1k chr12 368 351 140971 140970 C 18 0.00 368 accept_chi 1 ALIGNMENT 36 YS2-17p09.q1k vc_5 394 359 1 36 C 36 100.00 397 reject_low 7 ALIGNMENT 0 YS2-17p09.q1k vc_5 358 62 5064 5063 C 297 0.00 397 reject_low 5 ALIGNMENT 0 YS2-17p09.q1k vc_5 358 62 37 36 C 297 0.00 397 reject_low 7 ALIGNMENT 296 YS2-17p09.p1k chr12 350 29 140970 141288 C 322 98.76 368 accept_chi 1 ALIGNMENT 41 YS2-17p09.q1k vc_3 397 357 2472 2512 C 41 100.00 397 reject_low 3 ALIGNMENT 308 YS2-17p09.q1k chr12 39 357 140970 141288 F 319 99.69 397 accept_chi 0 ALIGNMENT 0 YS2-17p09.q1k vc_1 356 62 2513 2512 C 295 0.00 397 reject_low 2 ALIGNMENT 39 YS2-17p09.q1k vc_5 397 359 5025 5063 C 39 100.00 397 reject_low 5 ALIGNMENT 38 YS2-17p09.q1k vc_7 360 397 13525 13562 F 38 100.00 397 reject_low 6 ALIGNMENT 41 YS2-17p09.q1k vc_1 397 357 2472 2512 C 41 100.00 397 reject_low 2 ALIGNMENT 1025 YS2-17p10.q1k chr04 1236 34 509981 511202 C 1203 96.34 1404 accept 0 ALIGNMENT 919 YS2-17p10.p1k chr04 32 1113 506605 507686 F 1082 95.84 1388 accept 0 ALIGNMENT 265 YS2-17p11.p1k scplasm1 520 63 4297 4753 C 458 87.34 1382 accept 0 ALIGNMENT 948 YS2-17p12.q1k chr16 42 1164 458908 460048 F 1123 96.26 1339 accept 0 ALIGNMENT 942 YS2-17p12.p1k chr16 1104 32 462703 463774 C 1073 95.90 1452 accept 0 ALIGNMENT 1005 YS2-17p14.p1k chr13 1212 26 428056 429252 C 1187 95.53 1449 accept 0 ALIGNMENT 969 YS2-17p14.q1k chr13 31 1172 425769 426927 F 1142 96.58 1338 accept 0 ALIGNMENT 38 YS2-17p15.q1k vc_7 461 498 13525 13562 F 38 100.00 498 reject_low 7 ALIGNMENT 41 YS2-17p15.q1k vc_1 498 458 2472 2512 C 41 100.00 498 reject_low 2 ALIGNMENT 0 YS2-17p15.q1k vc_7 62 460 13525 13524 F 399 0.00 498 reject_low 7 ALIGNMENT 36 YS2-17p15.q1k vc_5 495 460 1 36 C 36 100.00 498 reject_low 8 ALIGNMENT 0 YS2-17p15.q1k vc_1 457 62 2513 2512 C 396 0.00 498 reject_low 2 ALIGNMENT 0 YS2-17p15.q1k chr12 459 498 840671 840670 F 40 0.00 498 accept_chi 1 ALIGNMENT 41 YS2-17p15.q1k vc_3 498 458 2472 2512 C 41 100.00 498 reject_low 4 ALIGNMENT 0 YS2-17p15.q1k vc_3 457 62 2513 2512 C 396 0.00 498 reject_low 4 ALIGNMENT 0 YS2-17p15.q1k vc_4 62 457 5831 5830 F 396 0.00 498 reject_low 5 ALIGNMENT 41 YS2-17p15.q1k vc_4 458 498 5831 5871 F 41 100.00 498 reject_low 5 ALIGNMENT 401 YS2-17p15.q1k chr12 38 458 840250 840671 F 421 99.29 498 accept_chi 1 ALIGNMENT 39 YS2-17p15.q1k vc_5 498 460 5025 5063 C 39 100.00 498 reject_low 6 ALIGNMENT 0 YS2-17p15.q1k vc_2 457 62 2146 2145 C 396 0.00 498 reject_low 3 ALIGNMENT 0 YS2-17p15.p1k chr12 464 447 840251 840250 C 18 0.00 464 accept_chi 0 ALIGNMENT 0 YS2-17p15.q1k vc_5 459 62 5064 5063 C 398 0.00 498 reject_low 6 ALIGNMENT 406 YS2-17p15.p1k chr12 446 25 840250 840671 C 422 99.53 464 accept_chi 0 ALIGNMENT 0 YS2-17p15.q1k vc_5 459 62 37 36 C 398 0.00 498 reject_low 8 ALIGNMENT 41 YS2-17p15.q1k vc_2 498 458 2105 2145 C 41 100.00 498 reject_low 3 ALIGNMENT 853 YS2-17p17.q1k chr06 30 1055 57135 58191 F 1026 95.52 1302 accept 0 ALIGNMENT 935 YS2-17p18.q1k chr04 1178 31 347902 349064 C 1148 96.34 1330 accept 0 ALIGNMENT 1001 YS2-17p19.q1k chr08 1178 31 222125 223281 C 1148 96.34 1369 accept 0 ALIGNMENT 1035 YS2-17p20.q1k chr07 1239 38 267941 269153 C 1202 96.26 1412 accept 0 ALIGNMENT 994 YS2-17p20.p1k chr07 42 1202 264363 265536 F 1161 96.21 1366 accept 0 ALIGNMENT 160 YS2-17p21.p1k vc_5 1241 926 4704 5025 C 316 84.49 1292 reject_low 5 ALIGNMENT 0 YS2-17p21.p1k vc_5 925 167 5026 5025 C 759 0.00 1292 reject_low 5 ALIGNMENT 26 YS2-17p21.p1k vc_1 956 926 2441 2472 C 31 96.77 1292 reject_low 8 ALIGNMENT 26 YS2-17p21.p1k vc_3 956 926 2441 2472 C 31 96.77 1292 reject_low 9 ALIGNMENT 720 YS2-17p21.p1k chr09 137 907 229105 229876 F 771 99.35 1292 accept 0 ALIGNMENT 160 YS2-17p21.p1k vc_1 1241 926 1784 2105 C 316 84.49 1292 reject_low 1 ALIGNMENT 0 YS2-17p21.p1k vc_4 167 925 5871 5870 F 759 0.00 1292 reject_low 4 ALIGNMENT 160 YS2-17p21.p1k vc_3 1241 926 1784 2105 C 316 84.49 1292 reject_low 3 ALIGNMENT 0 YS2-17p21.p1k vc_7 167 925 13562 13561 F 759 0.00 1292 reject_low 7 ALIGNMENT 292 YS2-17p21.q1k chr09 585 104 229356 229830 C 482 88.38 1515 accept 0 ALIGNMENT 0 YS2-17p21.p1k vc_3 925 167 2473 2472 C 759 0.00 1292 reject_low 9 ALIGNMENT 160 YS2-17p21.p1k vc_7 926 1241 13562 13883 F 316 84.49 1292 reject_low 7 ALIGNMENT 0 YS2-17p21.p1k vc_2 925 167 2106 2105 C 759 0.00 1292 reject_low 2 ALIGNMENT 0 YS2-17p21.p1k vc_1 925 167 2473 2472 C 759 0.00 1292 reject_low 8 ALIGNMENT 0 YS2-17p21.p1k vc_7 167 925 100 99 F 759 0.00 1292 reject_low 6 ALIGNMENT 160 YS2-17p21.p1k vc_4 926 1241 5871 6192 F 316 84.49 1292 reject_low 4 ALIGNMENT 160 YS2-17p21.p1k vc_7 926 1241 100 421 F 316 84.49 1292 reject_low 6 ALIGNMENT 160 YS2-17p21.p1k vc_2 1241 926 1784 2105 C 316 84.49 1292 reject_low 2 ALIGNMENT 0 YS2-17p21.p1k vc_1 925 167 2106 2105 C 759 0.00 1292 reject_low 1 ALIGNMENT 0 YS2-17p21.p1k vc_3 925 167 2106 2105 C 759 0.00 1292 reject_low 3 ALIGNMENT 999 YS2-17p23.q1k chr07 1188 28 761178 762353 C 1161 96.47 1309 accept 0 ALIGNMENT 889 YS2-17p23.p1k chr07 28 1133 757880 759000 F 1106 95.21 1184 accept 0 ALIGNMENT 363 YS2-17p24.p1k chr12 31 408 468553 468930 F 378 99.47 1295 reject_low 2 ALIGNMENT 359 YS2-17p24.p1k chr12 221 622 459606 460016 F 402 97.26 1295 reject_low 3 ALIGNMENT 0 YS2-17p24.p1k chr12 62 289 472464 472463 F 228 0.00 1295 reject_low 5 ALIGNMENT 0 YS2-17p24.p1k chr12 424 915 489481 489480 F 492 0.00 1295 reject_low 4 ALIGNMENT 119 YS2-17p24.p1k chr12 290 408 485696 485814 F 119 100.00 1295 reject_low 7 ALIGNMENT 119 YS2-17p24.p1k chr12 290 408 472464 472582 F 119 100.00 1295 reject_low 5 ALIGNMENT 595 YS2-17p24.q1k chr12 797 36 465247 466008 C 762 93.18 1365 accept 0 ALIGNMENT 0 YS2-17p24.p1k chr12 62 220 459606 459605 F 159 0.00 1295 reject_low 3 ALIGNMENT 0 YS2-17p24.p1k chr12 62 289 485696 485695 F 228 0.00 1295 reject_low 7 ALIGNMENT 0 YS2-17p24.p1k chr12 409 915 472582 472581 F 507 0.00 1295 reject_low 5 ALIGNMENT 0 YS2-17p24.p1k chr12 623 915 460016 460015 F 293 0.00 1295 reject_low 3 ALIGNMENT 0 YS2-17p24.p1k chr12 409 915 485814 485813 F 507 0.00 1295 reject_low 7 ALIGNMENT 0 YS2-17p24.p1k chr12 409 915 482162 482161 F 507 0.00 1295 reject_low 6 ALIGNMENT 0 YS2-17p24.p1k chr12 62 289 489348 489347 F 228 0.00 1295 reject_low 4 ALIGNMENT 589 YS2-17p24.q1k chr12 767 36 456140 456871 C 732 93.99 1365 reject_low 1 ALIGNMENT 0 YS2-17p24.p1k chr12 62 289 482044 482043 F 228 0.00 1295 reject_low 6 ALIGNMENT 128 YS2-17p24.p1k chr12 290 423 489348 489481 F 134 98.51 1295 reject_low 4 ALIGNMENT 119 YS2-17p24.p1k chr12 290 408 482044 482162 F 119 100.00 1295 reject_low 6 ALIGNMENT 820 YS2-17p24.p1k chr12 31 1255 459416 460672 F 1225 91.10 1295 accept 0 ALIGNMENT 0 YS2-17p24.p1k chr12 409 915 468930 468929 F 507 0.00 1295 reject_low 2 ALIGNMENT 389 YS2-18a02.q1k chr10 891 91 690687 691478 C 801 84.27 1425 accept 0 ALIGNMENT 36 YS2-18a03.q1k vc_5 407 372 1 36 C 36 100.00 410 reject_low 8 ALIGNMENT 0 YS2-18a03.q1k vc_2 371 62 2144 2143 C 310 0.00 410 reject_low 3 ALIGNMENT 0 YS2-18a03.q1k vc_1 371 62 2511 2510 C 310 0.00 410 reject_low 2 ALIGNMENT 0 YS2-18a03.q1k vc_5 371 62 5064 5063 C 310 0.00 410 reject_low 6 ALIGNMENT 0 YS2-18a03.q1k vc_7 62 372 13525 13524 F 311 0.00 410 reject_low 7 ALIGNMENT 0 YS2-18a03.q1k chr14 372 410 113735 113734 F 39 0.00 410 accept_chi 1 ALIGNMENT 39 YS2-18a03.q1k vc_1 410 372 2472 2510 C 39 100.00 410 reject_low 2 ALIGNMENT 316 YS2-18a03.p1k chr14 360 31 113405 113734 C 330 98.79 378 accept_chi 0 ALIGNMENT 39 YS2-18a03.q1k vc_2 410 372 2105 2143 C 39 100.00 410 reject_low 3 ALIGNMENT 0 YS2-18a03.q1k vc_4 62 371 5833 5832 F 310 0.00 410 reject_low 5 ALIGNMENT 0 YS2-18a03.p1k chr14 378 361 113406 113405 C 18 0.00 378 accept_chi 0 ALIGNMENT 39 YS2-18a03.q1k vc_3 410 372 2472 2510 C 39 100.00 410 reject_low 4 ALIGNMENT 39 YS2-18a03.q1k vc_5 410 372 5025 5063 C 39 100.00 410 reject_low 6 ALIGNMENT 39 YS2-18a03.q1k vc_4 372 410 5833 5871 F 39 100.00 410 reject_low 5 ALIGNMENT 38 YS2-18a03.q1k vc_7 373 410 13525 13562 F 38 100.00 410 reject_low 7 ALIGNMENT 0 YS2-18a03.q1k vc_5 371 62 37 36 C 310 0.00 410 reject_low 8 ALIGNMENT 0 YS2-18a03.q1k vc_3 371 62 2511 2510 C 310 0.00 410 reject_low 4 ALIGNMENT 301 YS2-18a03.q1k chr14 38 371 113405 113735 F 334 97.60 410 accept_chi 1 ALIGNMENT 971 YS2-18a04.q1k chr14 31 1167 64840 65971 F 1137 96.13 1182 accept 0 ALIGNMENT 1005 YS2-18a04.p1k chr14 1175 36 68515 69669 C 1140 97.37 1472 accept 0 ALIGNMENT 978 YS2-18a05.q1k chr15 38 1209 449332 450503 F 1172 95.82 1221 accept 0 ALIGNMENT 961 YS2-18a05.p1k chr15 1153 36 454048 455176 C 1118 96.33 1430 accept 0 ALIGNMENT 0 YS2-18a06.q1k vc_4 62 170 5831 5830 F 109 0.00 211 reject_low 4 ALIGNMENT 0 YS2-18a06.q1k chr15 171 211 549363 549362 F 41 0.00 211 accept 0 ALIGNMENT 0 YS2-18a06.q1k vc_7 62 173 13525 13524 F 112 0.00 211 reject_low 6 ALIGNMENT 39 YS2-18a06.q1k vc_5 211 173 5025 5063 C 39 100.00 211 reject_low 5 ALIGNMENT 38 YS2-18a06.q1k vc_7 174 211 13525 13562 F 38 100.00 211 reject_low 6 ALIGNMENT 41 YS2-18a06.q1k vc_2 211 171 2105 2145 C 41 100.00 211 reject_low 2 ALIGNMENT 0 YS2-18a06.q1k vc_5 172 62 5064 5063 C 111 0.00 211 reject_low 5 ALIGNMENT 41 YS2-18a06.q1k vc_3 211 171 2472 2512 C 41 100.00 211 reject_low 3 ALIGNMENT 0 YS2-18a06.q1k vc_3 170 62 2513 2512 C 109 0.00 211 reject_low 3 ALIGNMENT 0 YS2-18a06.q1k vc_2 170 62 2146 2145 C 109 0.00 211 reject_low 2 ALIGNMENT 41 YS2-18a06.q1k vc_1 211 171 2472 2512 C 41 100.00 211 reject_low 1 ALIGNMENT 36 YS2-18a06.q1k vc_5 208 173 1 36 C 36 100.00 211 reject_low 7 ALIGNMENT 0 YS2-18a06.q1k vc_1 170 62 2513 2512 C 109 0.00 211 reject_low 1 ALIGNMENT 41 YS2-18a06.q1k vc_4 171 211 5831 5871 F 41 100.00 211 reject_low 4 ALIGNMENT 0 YS2-18a06.q1k vc_5 172 62 37 36 C 111 0.00 211 reject_low 7 ALIGNMENT 124 YS2-18a06.q1k chr15 36 170 549229 549363 F 135 99.26 211 accept 0 ALIGNMENT 63 YS2-18a07.q1k vc_5 1041 1227 2402 2580 F 187 80.75 1304 reject_low 2 ALIGNMENT 63 YS2-18a07.q1k vc_4 1227 1041 5630 5808 C 187 80.75 1304 reject_low 6 ALIGNMENT 0 YS2-18a07.q1k vc_4 96 1040 130 129 F 945 0.00 1304 reject_low 7 ALIGNMENT 0 YS2-18a07.q1k vc_5 996 96 37 36 C 901 0.00 1304 reject_low 11 ALIGNMENT 53 YS2-18a07.q1k vc_4 1119 1041 1453 1530 C 79 89.87 1304 reject_low 9 ALIGNMENT 868 YS2-18a07.p1k chr13 984 25 57904 58861 C 960 98.12 1446 accept_chi 1 ALIGNMENT 0 YS2-18a07.q1k vc_5 996 96 5064 5063 C 901 0.00 1304 reject_low 10 ALIGNMENT 0 YS2-18a07.q1k vc_4 1040 96 1531 1530 C 945 0.00 1304 reject_low 9 ALIGNMENT 101 YS2-18a07.p1k vc_7 1002 1231 100 335 F 230 82.61 1446 reject_low 3 ALIGNMENT 27 YS2-18a07.q1k vc_5 1032 997 1 36 C 36 91.67 1304 reject_low 11 ALIGNMENT 62 YS2-18a07.q1k vc_4 1041 1170 130 255 F 130 84.62 1304 reject_low 7 ALIGNMENT 30 YS2-18a07.q1k vc_4 997 1035 5833 5871 F 39 92.31 1304 reject_low 8 ALIGNMENT 0 YS2-18a07.q1k vc_4 1036 1040 5872 6356 F 5 0.00 1304 reject_low 8 ALIGNMENT 0 YS2-18a07.q1k vc_4 1040 96 5809 5808 C 945 0.00 1304 reject_low 6 ALIGNMENT 63 YS2-18a07.q1k vc_7 1227 1041 2545 2723 C 187 80.75 1304 reject_low 3 ALIGNMENT 0 YS2-18a07.p1k vc_7 107 1001 13562 13561 F 895 0.00 1446 reject_low 5 ALIGNMENT 101 YS2-18a07.p1k vc_5 1231 1002 4790 5025 C 230 82.61 1446 reject_low 2 ALIGNMENT 0 YS2-18a07.q1k vc_7 1040 96 2724 2723 C 945 0.00 1304 reject_low 3 ALIGNMENT 0 YS2-18a07.p1k vc_5 1001 107 5026 5025 C 895 0.00 1446 reject_low 2 ALIGNMENT 30 YS2-18a07.q1k vc_5 1035 997 5025 5063 C 39 92.31 1304 reject_low 10 ALIGNMENT 0 YS2-18a07.q1k vc_5 96 1040 2402 2401 F 945 0.00 1304 reject_low 2 ALIGNMENT 101 YS2-18a07.p1k vc_7 1002 1231 13562 13797 F 230 82.61 1446 reject_low 5 ALIGNMENT 62 YS2-18a07.q1k vc_4 1041 1170 6357 6482 F 130 84.62 1304 reject_low 8 ALIGNMENT 101 YS2-18a07.p1k vc_4 1002 1231 5871 6106 F 230 82.61 1446 reject_low 4 ALIGNMENT 0 YS2-18a07.q1k vc_4 96 996 5833 5832 F 901 0.00 1304 reject_low 8 ALIGNMENT 0 YS2-18a07.p1k vc_4 107 1001 5871 5870 F 895 0.00 1446 reject_low 4 ALIGNMENT 0 YS2-18a07.p1k vc_7 107 1001 100 99 F 895 0.00 1446 reject_low 3 ALIGNMENT 892 YS2-18a07.q1k chr13 38 997 57904 58863 F 960 98.85 1304 accept_chi 0 ALIGNMENT 222 YS2-18a08.p1k chr08 292 30 372906 373169 C 263 97.72 311 accept 0 ALIGNMENT 0 YS2-18a08.q1k vc_4 305 307 1615 1878 F 3 0.00 830 reject_vc 3 ALIGNMENT 65 YS2-18a08.q1k vc_4 238 304 1548 1614 F 67 100.00 830 reject_vc 3 ALIGNMENT 302 YS2-18a08.q1k vc_2 1 303 2322 2624 F 303 100.00 830 reject_low 6 ALIGNMENT 0 YS2-18a08.q1k vc_4 62 237 1548 1547 F 176 0.00 830 reject_vc 3 ALIGNMENT 579 YS2-18a08.q1k vc_5 1 765 2556 3319 F 765 92.55 830 reject_vc 1 ALIGNMENT 0 YS2-18a08.q1k vc_7 304 304 4700 4921 C 1 0.00 830 reject_low 8 ALIGNMENT 0 YS2-18a08.q1k vc_4 237 62 6340 6339 C 176 0.00 830 reject_low 10 ALIGNMENT 0 YS2-18a08.p1k chr08 311 293 372907 372906 C 19 0.00 311 accept 0 ALIGNMENT 247 YS2-18a08.q1k vc_7 303 53 4922 5172 C 251 99.60 830|0,1 reject_low 8 ALIGNMENT 268 YS2-18a08.q1k vc_4 308 765 1879 2335 F 458 87.34 830 reject_vc 3 ALIGNMENT 302 YS2-18a08.q1k vc_3 1 303 2689 2991 F 303 100.00 830 reject_low 7 ALIGNMENT 51 YS2-18a08.q1k vc_7 54 3 6360 6411 C 52 100.00 830|1,0 reject_low 8 ALIGNMENT 0 YS2-18a08.q1k vc_7 53 54 5172 6360 C 0 0.00 830 reject_low 8 ALIGNMENT 0 YS2-18a08.q1k vc_4 237 62 113 112 C 176 0.00 830 reject_low 9 ALIGNMENT 409 YS2-18a08.q1k vc_4 417 1 5236 5654 C 417 99.52 830 reject_low 4 ALIGNMENT 65 YS2-18a08.q1k vc_4 304 238 6273 6339 C 67 100.00 830 reject_low 10 ALIGNMENT 112 YS2-18a08.q1k vc_7 417 305 4587 4699 C 113 100.00 830 reject_low 8 ALIGNMENT 302 YS2-18a08.q1k vc_1 1 303 2689 2991 F 303 100.00 830 reject_low 5 ALIGNMENT 65 YS2-18a08.q1k vc_4 304 238 46 112 C 67 100.00 830 reject_low 9 ALIGNMENT 579 YS2-18a08.q1k vc_7 765 1 1806 2569 C 765 92.68 830 reject_vc 2 ALIGNMENT 0 YS2-18a09.p1k chr12 62 639 485696 485695 F 578 0.00 1426 reject_low 7 ALIGNMENT 0 YS2-18a09.p1k chr12 62 639 482044 482043 F 578 0.00 1426 reject_low 6 ALIGNMENT 0 YS2-18a09.p1k chr06 808 381 31623 31622 C 428 0.00 1426 reject_low 4 ALIGNMENT 119 YS2-18a09.p1k chr12 640 758 472464 472582 F 119 100.00 1426 reject_low 5 ALIGNMENT 0 YS2-18a09.p1k chr12 62 639 489348 489347 F 578 0.00 1426 reject_low 3 ALIGNMENT 0 YS2-18a09.p1k chr12 62 639 472464 472463 F 578 0.00 1426 reject_low 5 ALIGNMENT 119 YS2-18a09.p1k chr12 640 758 485696 485814 F 119 100.00 1426 reject_low 7 ALIGNMENT 0 YS2-18a09.p1k chr12 774 808 489481 489480 F 35 0.00 1426 reject_low 3 ALIGNMENT 1052 YS2-18a09.q1k chr12 1182 32 453126 454282 C 1151 97.74 1226 reject_low 1 ALIGNMENT 680 YS2-18a09.p1k chr12 31 758 468203 468930 F 728 99.04 1426 reject_low 2 ALIGNMENT 94 YS2-18a09.p1k chr06 380 273 31622 31729 C 108 98.15 1426 reject_low 4 ALIGNMENT 0 YS2-18a09.p1k chr12 759 808 485814 485813 F 50 0.00 1426 reject_low 7 ALIGNMENT 0 YS2-18a09.p1k chr06 272 62 31730 31729 C 211 0.00 1426 reject_low 4 ALIGNMENT 0 YS2-18a09.p1k chr12 759 808 468930 468929 F 50 0.00 1426 reject_low 2 ALIGNMENT 0 YS2-18a09.p1k chr12 759 808 472582 472581 F 50 0.00 1426 reject_low 5 ALIGNMENT 128 YS2-18a09.p1k chr12 640 773 489348 489481 F 134 98.51 1426 reject_low 3 ALIGNMENT 1052 YS2-18a09.q1k chr12 1182 32 462263 463419 C 1151 97.74 1226 accept 0 ALIGNMENT 0 YS2-18a09.p1k chr12 759 808 482162 482161 F 50 0.00 1426 reject_low 6 ALIGNMENT 903 YS2-18a09.p1k chr12 31 1135 459066 460186 F 1105 95.66 1426 accept 0 ALIGNMENT 119 YS2-18a09.p1k chr12 640 758 482044 482162 F 119 100.00 1426 reject_low 6 ALIGNMENT 978 YS2-18a10.q1k chr12 1168 40 774329 775470 C 1129 96.81 1248 accept 0 ALIGNMENT 947 YS2-18a10.p1k chr12 34 1111 770408 771497 F 1078 97.31 1412 accept 0 ALIGNMENT 920 YS2-18a11.p1k chr10 31 1084 306346 307413 F 1054 96.68 1353 accept 0 ALIGNMENT 1001 YS2-18a11.q1k chr10 1282 40 309096 310331 C 1243 95.41 1294 accept 0 ALIGNMENT 992 YS2-18a14.q1k chr02 41 1206 772895 774070 F 1166 96.23 1365 accept 0 ALIGNMENT 999 YS2-18a14.p1k chr02 1207 33 776998 778184 C 1175 96.43 1496 accept 0 ALIGNMENT 685 YS2-18a16.q1k chr04 35 1291 1523301 1524569 F 1257 86.63 1325 ambiguous_tel 9 ALIGNMENT 0 YS2-18a16.q1k chr02 451 857 809534 809533 F 407 0.00 1325 ambiguous_tel 31 ALIGNMENT 782 YS2-18a16.q1k chr12 36 1148 1062986 1064094 F 1113 91.37 1325 ambiguous_tel 8 ALIGNMENT 0 YS2-18a16.p1k chr09 781 915 205557 205556 F 135 0.00 1471 reject_low 22 ALIGNMENT 303 YS2-18a16.p1k chr14 438 779 546738 547078 F 342 97.66 1471 reject_low 24 ALIGNMENT 0 YS2-18a16.p1k chr04 780 915 668431 668430 F 136 0.00 1471 reject_low 28 ALIGNMENT 306 YS2-18a16.p1k chr07 439 780 707199 707539 F 342 97.95 1471 reject_low 21 ALIGNMENT 0 YS2-18a16.p1k chr07 781 915 707539 707538 F 135 0.00 1471 reject_low 21 ALIGNMENT 273 YS2-18a16.q1k chr08 359 35 11890 12214 C 325 94.77 1325 ambiguous_tel 34 ALIGNMENT 124 YS2-18a16.p1k chr03 645 779 168929 169063 F 135 98.52 1471|3,0 reject_low 40 ALIGNMENT 0 YS2-18a16.p1k chr05 915 789 492426 492425 C 127 0.00 1471 reject_low 29 ALIGNMENT 306 YS2-18a16.p1k chr09 439 780 205217 205557 F 342 97.95 1471 reject_low 22 ALIGNMENT 0 YS2-18a16.p1k chr04 62 438 668091 668090 F 377 0.00 1471 reject_low 28 ALIGNMENT 0 YS2-18a16.p1k chr05 915 780 249930 249929 C 136 0.00 1471 reject_low 19 ALIGNMENT 0 YS2-18a16.p1k chr05 438 62 250270 250269 C 377 0.00 1471 reject_low 19 ALIGNMENT 306 YS2-18a16.p1k chr12 438 779 373999 374339 F 342 97.95 1471 reject_low 18 ALIGNMENT 0 YS2-18a16.p1k chr01 780 915 182953 182952 F 136 0.00 1471 reject_low 25 ALIGNMENT 0 YS2-18a16.p1k chr14 62 567 546553 546552 F 506 0.00 1471 reject_low 39 ALIGNMENT 0 YS2-18a16.p1k chr16 62 448 856551 856550 F 387 0.00 1471 reject_low 10 ALIGNMENT 0 YS2-18a16.p1k chr11 434 62 202634 202633 C 373 0.00 1471 reject_low 12 ALIGNMENT 0 YS2-18a16.p1k chr14 780 915 547078 547077 F 136 0.00 1471 reject_low 24 ALIGNMENT 0 YS2-18a16.p1k chr16 869 915 856970 856969 F 47 0.00 1471 reject_low 10 ALIGNMENT 0 YS2-18a16.q1k chr05 329 857 64090 64089 F 529 0.00 1325 manual 35 ALIGNMENT 305 YS2-18a16.p1k chr01 439 779 182614 182953 F 341 97.95 1471 reject_low 25 ALIGNMENT 0 YS2-18a16.p1k chr07 780 915 712549 712548 F 136 0.00 1471 reject_low 27 ALIGNMENT 0 YS2-18a16.q1k chr09 395 857 434362 434361 F 463 0.00 1325 ambiguous_tel 37 ALIGNMENT 0 YS2-18a16.q1k chr07 451 857 1080790 1080789 F 407 0.00 1325 ambiguous_tel 32 ALIGNMENT 0 YS2-18a16.p1k chr12 780 915 374339 374338 F 136 0.00 1471 reject_low 18 ALIGNMENT 0 YS2-18a16.q1k chr16 811 726 7461 7530 C 86 0.00 1325 ambiguous_tel 41 ALIGNMENT 0 YS2-18a16.p1k chr01 62 438 182614 182613 F 377 0.00 1471 reject_low 25 ALIGNMENT 0 YS2-18a16.p1k chr05 438 62 434968 434967 C 377 0.00 1471 reject_low 15 ALIGNMENT 22 YS2-18a16.q1k chr15 812 856 1083681 1083724 F 45 86.67 1325 ambiguous_tel 42 ALIGNMENT 306 YS2-18a16.p1k chr11 783 435 202286 202633 C 349 97.42 1471 reject_low 12 ALIGNMENT 0 YS2-18a16.p1k chr05 915 780 434628 434627 C 136 0.00 1471 reject_low 15 ALIGNMENT 251 YS2-18a16.q1k chr13 35 725 922717 923414 F 691 80.75 1325 ambiguous_tel 30 ALIGNMENT 0 YS2-18a16.q1k chr08 857 360 11891 11890 C 498 0.00 1325 ambiguous_tel 34 ALIGNMENT 245 YS2-18a16.p1k chr05 788 523 492425 492690 C 266 98.50 1471 reject_low 29 ALIGNMENT 0 YS2-18a16.p1k chr07 915 780 319427 319426 C 136 0.00 1471 reject_low 26 ALIGNMENT 307 YS2-18a16.p1k chr05 779 439 249929 250269 C 341 97.95 1471 reject_low 19 ALIGNMENT 316 YS2-18a16.p1k chr05 779 439 434627 434967 C 341 98.83 1471 reject_low 15 ALIGNMENT 175 YS2-18a16.q1k chr01 328 39 176653 176942 C 290 86.90 1325 manual 38 ALIGNMENT 260 YS2-18a16.q1k chr15 35 725 1082912 1083610 F 691 81.04 1325 ambiguous_tel 42 ALIGNMENT 783 YS2-18a16.q1k chr14 35 1291 781987 783239 F 1257 89.10 1325 ambiguous_tel 4 ALIGNMENT 0 YS2-18a16.q1k chr07 857 422 6196 6195 C 436 0.00 1325 ambiguous_tel 33 ALIGNMENT 0 YS2-18a16.q1k chr15 726 811 1083611 1083680 F 86 0.00 1325 ambiguous_tel 42 ALIGNMENT 0 YS2-18a16.p1k chr14 62 437 546738 546737 F 376 0.00 1471 reject_low 24 ALIGNMENT 305 YS2-18a16.p1k chr14 439 780 726235 726576 F 342 97.66 1471 reject_low 23 ALIGNMENT 0 YS2-18a16.p1k chr15 62 437 854272 854271 F 376 0.00 1471 reject_low 17 ALIGNMENT 0 YS2-18a16.p1k chr16 62 438 769317 769316 F 377 0.00 1471 reject_low 20 ALIGNMENT 727 YS2-18a16.q1k chr11 1291 35 846 2104 C 1257 87.67 1325 ambiguous_tel 7 ALIGNMENT 320 YS2-18a16.p1k chr07 439 781 735987 736329 F 343 99.13 1471 reject_low 13 ALIGNMENT 307 YS2-18a16.p1k chr16 439 779 769317 769657 F 341 97.95 1471 reject_low 20 ALIGNMENT 305 YS2-18a16.p1k chr07 439 779 712210 712549 F 341 97.95 1471 reject_low 27 ALIGNMENT 305 YS2-18a16.p1k chr07 779 439 319426 319765 C 341 97.95 1471 reject_low 26 ALIGNMENT 0 YS2-18a16.p1k chr07 62 438 707199 707198 F 377 0.00 1471 reject_low 21 ALIGNMENT 814 YS2-18a16.q1k chr10 1271 35 7826 9069 C 1237 90.06 1325 ambiguous_tel 3 ALIGNMENT 309 YS2-18a16.p1k chr15 438 779 854272 854612 F 342 98.25 1471 reject_low 17 ALIGNMENT 0 YS2-18a16.q1k chr15 857 828 11053 11052 C 30 0.00 1325 ambiguous_tel 11 ALIGNMENT 0 YS2-18a16.p1k chr09 62 438 205217 205216 F 377 0.00 1471 reject_low 22 ALIGNMENT 597 YS2-18a16.q1k chr15 827 35 11052 11841 C 793 92.69 1325 ambiguous_tel 11 ALIGNMENT 188 YS2-18a16.p1k chr03 441 650 168386 168595 F 210 98.10 1471|0,3 reject_low 40 ALIGNMENT 0 YS2-18a16.p1k chr05 522 62 492691 492690 C 461 0.00 1471 reject_low 29 ALIGNMENT 273 YS2-18a16.q1k chr07 35 450 1080381 1080790 F 416 89.66 1325 ambiguous_tel 32 ALIGNMENT 0 YS2-18a16.p1k chr07 782 915 736329 736328 F 134 0.00 1471 reject_low 13 ALIGNMENT 0 YS2-18a16.q1k chr01 857 329 176654 176653 C 529 0.00 1325 manual 38 ALIGNMENT 1036 YS2-18a16.p1k chr08 1203 35 145895 147068 C 1169 97.26 1471 accept_chi 0 ALIGNMENT 220 YS2-18a16.q1k chr09 35 394 434003 434362 F 360 87.78 1325 ambiguous_tel 37 ALIGNMENT 821 YS2-18a16.q1k chr01 1271 35 860 2100 C 1237 90.14 1325 ambiguous_tel 1 ALIGNMENT 0 YS2-18a16.p1k chr02 781 915 198058 198057 F 135 0.00 1471 reject_low 16 ALIGNMENT 0 YS2-18a16.p1k chr14 688 915 546674 546673 F 228 0.00 1471 reject_low 39 ALIGNMENT 0 YS2-18a16.p1k chr14 781 915 726576 726575 F 135 0.00 1471 reject_low 23 ALIGNMENT 0 YS2-18a16.p1k chr04 915 781 945949 945948 C 135 0.00 1471 reject_low 14 ALIGNMENT 0 YS2-18a16.p1k chr07 62 438 735987 735986 F 377 0.00 1471 reject_low 13 ALIGNMENT 0 YS2-18a16.p1k chr07 438 62 319766 319765 C 377 0.00 1471 reject_low 26 ALIGNMENT 0 YS2-18a16.p1k chr03 780 915 169063 169062 F 136 0.00 1471 reject_low 40 ALIGNMENT 276 YS2-18a16.q1k chr02 35 450 809120 809534 F 416 89.66 1325 ambiguous_tel 31 ALIGNMENT 320 YS2-18a16.p1k chr04 780 439 945948 946289 C 342 99.12 1471 reject_low 14 ALIGNMENT 25 YS2-18a16.p1k chr14 568 687 546553 546674 F 120 75.83 1471 reject_low 39 ALIGNMENT 262 YS2-18a16.q1k chr16 725 35 7531 8229 C 691 81.04 1325 ambiguous_tel 41 ALIGNMENT 0 YS2-18a16.q1k chr03 469 857 308309 308308 F 389 0.00 1325 ambiguous_tel 36 ALIGNMENT 249 YS2-18a16.q1k chr05 35 328 63797 64090 F 294 94.90 1325 manual 35 ALIGNMENT 817 YS2-18a16.q1k chr09 1271 35 7843 9086 C 1237 90.14 1325 ambiguous_tel 2 ALIGNMENT 0 YS2-18a16.p1k chr07 62 438 712210 712209 F 377 0.00 1471 reject_low 27 ALIGNMENT 0 YS2-18a16.p1k chr02 62 438 197717 197716 F 377 0.00 1471 reject_low 16 ALIGNMENT 0 YS2-18a16.p1k chr03 648 647 168593 168931 F 0 0.00 1471 reject_low 40 ALIGNMENT 22 YS2-18a16.q1k chr16 856 812 7417 7460 C 45 86.67 1325 ambiguous_tel 41 ALIGNMENT 304 YS2-18a16.p1k chr04 439 779 668091 668431 F 341 97.65 1471 reject_low 28 ALIGNMENT 215 YS2-18a16.q1k chr03 35 468 307875 308309 F 434 84.33 1325 ambiguous_tel 36 ALIGNMENT 0 YS2-18a16.p1k chr12 62 437 373999 373998 F 376 0.00 1471 reject_low 18 ALIGNMENT 765 YS2-18a16.q1k chr02 1291 35 6646 7898 C 1257 88.62 1325 ambiguous_tel 5 ALIGNMENT 771 YS2-18a16.q1k chr12 1237 35 12178 13376 C 1203 89.61 1325 ambiguous_tel 6 ALIGNMENT 0 YS2-18a16.p1k chr16 780 915 769657 769656 F 136 0.00 1471 reject_low 20 ALIGNMENT 311 YS2-18a16.p1k chr02 439 780 197717 198058 F 342 98.25 1471 reject_low 16 ALIGNMENT 271 YS2-18a16.q1k chr07 421 35 6195 6583 C 387 90.70 1325 ambiguous_tel 33 ALIGNMENT 0 YS2-18a16.p1k chr03 62 440 168386 168385 F 379 0.00 1471 reject_low 40 ALIGNMENT 0 YS2-18a16.p1k chr15 780 915 854612 854611 F 136 0.00 1471 reject_low 17 ALIGNMENT 0 YS2-18a16.q1k chr13 726 857 923414 923413 F 132 0.00 1325 ambiguous_tel 30 ALIGNMENT 0 YS2-18a16.p1k chr14 62 438 726235 726234 F 377 0.00 1471 reject_low 23 ALIGNMENT 0 YS2-18a16.p1k chr11 915 784 202287 202286 C 132 0.00 1471 reject_low 12 ALIGNMENT 375 YS2-18a16.p1k chr16 449 868 856551 856970 F 420 97.14 1471 reject_low 10 ALIGNMENT 0 YS2-18a16.p1k chr04 438 62 946290 946289 C 377 0.00 1471 reject_low 14 ALIGNMENT 121 YS2-18a19.q1k chr12 160 29 913943 914074 C 132 97.73 201 accept 0 ALIGNMENT 0 YS2-18a19.q1k chr12 201 161 913944 913943 C 41 0.00 201 accept 0 ALIGNMENT 42 YS2-18a19.q1k vc_1 201 160 2472 2513 C 42 100.00 201 reject_low 1 ALIGNMENT 0 YS2-18a19.q1k vc_1 159 62 2514 2513 C 98 0.00 201 reject_low 1 ALIGNMENT 0 YS2-18a19.q1k vc_7 62 163 13525 13524 F 102 0.00 201 reject_low 5 ALIGNMENT 0 YS2-18a19.q1k vc_5 162 62 37 36 C 101 0.00 201 reject_low 6 ALIGNMENT 36 YS2-18a19.q1k vc_5 198 163 1 36 C 36 100.00 201 reject_low 6 ALIGNMENT 39 YS2-18a19.q1k vc_5 201 163 5025 5063 C 39 100.00 201 reject_low 4 ALIGNMENT 0 YS2-18a19.q1k vc_4 62 159 5830 5829 F 98 0.00 201 reject_low 3 ALIGNMENT 0 YS2-18a19.q1k vc_3 159 62 2514 2513 C 98 0.00 201 reject_low 2 ALIGNMENT 0 YS2-18a19.q1k vc_5 162 62 5064 5063 C 101 0.00 201 reject_low 4 ALIGNMENT 38 YS2-18a19.q1k vc_7 164 201 13525 13562 F 38 100.00 201 reject_low 5 ALIGNMENT 42 YS2-18a19.q1k vc_4 160 201 5830 5871 F 42 100.00 201 reject_low 3 ALIGNMENT 42 YS2-18a19.q1k vc_3 201 160 2472 2513 C 42 100.00 201 reject_low 2 ALIGNMENT 370 YS2-18a20.p1k chr05 216 890 419528 420201 F 675 86.37 1489 accept 0 ALIGNMENT 599 YS2-18a21.q1k chr12 23 794 454900 455672 F 772 93.52 1179 accept 0 ALIGNMENT 599 YS2-18a21.q1k chr12 23 794 464037 464809 F 772 93.52 1179 accept 1 ALIGNMENT 1075 YS2-18a21.p1k chr12 1267 32 466445 467690 C 1236 96.68 1384 accept 1 ALIGNMENT 1075 YS2-18a21.p1k chr12 1267 32 457308 458553 C 1236 96.68 1384 accept 0 ALIGNMENT 1067 YS2-18a22.q1k chr13 30 1271 12856 14109 F 1242 96.54 1303 accept 0 ALIGNMENT 1008 YS2-18a22.p1k chr13 1214 33 17661 18865 C 1182 96.11 1416 accept 0 ALIGNMENT 1015 YS2-18a23.q1k chr04 1142 33 1086742 1087844 C 1110 98.38 1142 accept 0 ALIGNMENT 171 YS2-18a23.q1k chr08 301 33 229337 229605 C 269 88.48 1142 reject_low 1 ALIGNMENT 0 YS2-18a23.q1k chr08 857 302 229338 229337 C 556 0.00 1142 reject_low 1 ALIGNMENT 39 YS2-18b01.q1k vc_5 378 340 5025 5063 C 39 100.00 378 reject_low 5 ALIGNMENT 36 YS2-18b01.q1k vc_5 375 340 1 36 C 36 100.00 378 reject_low 7 ALIGNMENT 298 YS2-18b01.q1k chr11 337 24 61370 61683 C 314 99.36 378 accept_chi 0 ALIGNMENT 0 YS2-18b01.q1k vc_3 337 62 2513 2512 C 276 0.00 378 reject_low 3 ALIGNMENT 0 YS2-18b01.q1k vc_1 337 62 2513 2512 C 276 0.00 378 reject_low 2 ALIGNMENT 289 YS2-18b01.p1k chr11 34 343 61374 61685 F 310 99.03 361 accept_chi 1 ALIGNMENT 0 YS2-18b01.q1k vc_5 339 62 37 36 C 278 0.00 378 reject_low 7 ALIGNMENT 0 YS2-18b01.q1k chr11 378 338 61371 61370 C 41 0.00 378 accept_chi 0 ALIGNMENT 0 YS2-18b01.q1k vc_4 62 337 5831 5830 F 276 0.00 378 reject_low 4 ALIGNMENT 0 YS2-18b01.q1k vc_7 62 340 13525 13524 F 279 0.00 378 reject_low 6 ALIGNMENT 41 YS2-18b01.q1k vc_1 378 338 2472 2512 C 41 100.00 378 reject_low 2 ALIGNMENT 0 YS2-18b01.q1k vc_5 339 62 5064 5063 C 278 0.00 378 reject_low 5 ALIGNMENT 41 YS2-18b01.q1k vc_4 338 378 5831 5871 F 41 100.00 378 reject_low 4 ALIGNMENT 38 YS2-18b01.q1k vc_7 341 378 13525 13562 F 38 100.00 378 reject_low 6 ALIGNMENT 41 YS2-18b01.q1k vc_3 378 338 2472 2512 C 41 100.00 378 reject_low 3 ALIGNMENT 0 YS2-18b01.p1k chr11 344 361 61685 61684 F 18 0.00 361 accept_chi 1 ALIGNMENT 994 YS2-18b02.p1k chr05 1189 30 123442 124609 C 1160 95.78 1449 accept 0 ALIGNMENT 972 YS2-18b02.q1k chr05 38 1191 118277 119450 F 1154 95.49 1292 accept 0 ALIGNMENT 1008 YS2-18b04.q1k chr07 37 1175 28714 29856 F 1139 97.45 1175 accept 0 ALIGNMENT 1018 YS2-18b04.p1k chr07 1235 31 29984 31200 C 1205 96.35 1482 accept 0 ALIGNMENT 971 YS2-18b06.p1k chr04 35 1146 1082009 1083131 F 1112 97.30 1429 accept 0 ALIGNMENT 984 YS2-18b06.q1k chr04 1109 30 1086132 1087220 C 1080 98.52 1209 accept 0 ALIGNMENT 913 YS2-18b07.p1k chr14 29 1066 145937 146987 F 1038 97.21 1383 accept 0 ALIGNMENT 1027 YS2-18b07.q1k chr14 1197 39 148903 150073 C 1159 97.07 1305 accept 0 ALIGNMENT 0 YS2-18b08.q1k chr10 825 192 74202 74201 C 634 0.00 1281 reject_low 1 ALIGNMENT 997 YS2-18b08.p1k chr03 1158 28 183083 184232 C 1131 97.70 1425 accept 0 ALIGNMENT 950 YS2-18b08.q1k chr03 26 1134 177738 178858 F 1109 96.84 1281 accept 0 ALIGNMENT 96 YS2-18b08.q1k chr10 191 26 74201 74367 C 166 86.75 1281 reject_low 1 ALIGNMENT 979 YS2-18b10.p1k chr01 1194 32 98071 99247 C 1163 96.04 1462 accept 0 ALIGNMENT 1040 YS2-18b10.q1k chr01 36 1254 97395 98617 F 1219 96.31 1273 accept 0 ALIGNMENT 965 YS2-18b11.q1k chr12 34 1091 463655 464718 F 1058 98.02 1271 reject_bad_break 1 ALIGNMENT 965 YS2-18b11.q1k chr12 34 1091 454518 455581 F 1058 98.02 1271 reject_bad_break 0 ALIGNMENT 0 YS2-18b11.p1k chr12 148 121 467825 467813 C 28 0.00 1446 reject_bad_break 1 ALIGNMENT 852 YS2-18b11.p1k chr12 1165 149 466810 467824 C 1017 95.87 1446 reject_bad_break 1 ALIGNMENT 852 YS2-18b11.p1k chr12 1165 149 457673 458687 C 1017 95.87 1446 reject_bad_break 0 ALIGNMENT 0 YS2-18b11.p1k chr12 148 121 458688 458676 C 28 0.00 1446 reject_bad_break 0 ALIGNMENT 47 YS2-18b11.p1k chr12 120 26 458677 458783 C 95 86.32 1446 reject_bad_break 0 ALIGNMENT 47 YS2-18b11.p1k chr12 120 26 467814 467920 C 95 86.32 1446 reject_bad_break 1 ALIGNMENT 966 YS2-18b12.q1k chr04 34 1239 971891 973108 F 1206 94.61 1300 accept 0 ALIGNMENT 981 YS2-18b12.p1k chr04 1161 36 973020 974162 C 1126 96.80 1428 accept 0 ALIGNMENT 959 YS2-18b13.q1k chr01 1123 32 135192 136296 C 1092 96.98 1330 accept 0 ALIGNMENT 984 YS2-18b13.p1k chr01 32 1164 134897 136038 F 1133 96.82 1467 accept 0 ALIGNMENT 200 YS2-18b15.q1k chr01 256 28 49379 49609 C 229 97.38 297 accept_chi 1 ALIGNMENT 41 YS2-18b15.q1k vc_4 257 297 5831 5871 F 41 100.00 297 reject_low 5 ALIGNMENT 38 YS2-18b15.q1k vc_7 260 297 13525 13562 F 38 100.00 297 reject_low 7 ALIGNMENT 40 YS2-18b15.q1k vc_5 297 252 5025 5070 C 46 95.65 297 reject_low 2 ALIGNMENT 37 YS2-18b15.q1k vc_5 294 252 1 43 C 43 95.35 297 reject_low 6 ALIGNMENT 0 YS2-18b15.q1k vc_5 251 62 5071 5070 C 190 0.00 297 reject_low 2 ALIGNMENT 0 YS2-18b15.q1k vc_7 62 259 13525 13524 F 198 0.00 297 reject_low 7 ALIGNMENT 0 YS2-18b15.q1k vc_4 62 256 5831 5830 F 195 0.00 297 reject_low 5 ALIGNMENT 0 YS2-18b15.q1k vc_1 256 62 2513 2512 C 195 0.00 297 reject_low 3 ALIGNMENT 200 YS2-18b15.p1k chr01 32 258 49383 49609 F 227 97.36 277 accept_chi 0 ALIGNMENT 0 YS2-18b15.p1k chr01 259 277 49609 49608 F 19 0.00 277 accept_chi 0 ALIGNMENT 41 YS2-18b15.q1k vc_1 297 257 2472 2512 C 41 100.00 297 reject_low 3 ALIGNMENT 0 YS2-18b15.q1k vc_5 251 62 44 43 C 190 0.00 297 reject_low 6 ALIGNMENT 0 YS2-18b15.q1k vc_3 256 62 2513 2512 C 195 0.00 297 reject_low 4 ALIGNMENT 41 YS2-18b15.q1k vc_3 297 257 2472 2512 C 41 100.00 297 reject_low 4 ALIGNMENT 0 YS2-18b15.q1k chr01 297 257 49380 49379 C 41 0.00 297 accept_chi 1 ALIGNMENT 1031 YS2-18b17.q1k chr04 32 1218 1125117 1126307 F 1187 96.12 1317 accept 0 ALIGNMENT 999 YS2-18b17.p1k chr04 1150 29 1126190 1127323 C 1122 97.06 1468 accept 0 ALIGNMENT 945 YS2-18b18.p1k chr08 33 1122 280242 281338 F 1090 96.42 1507 accept 0 ALIGNMENT 966 YS2-18b18.q1k chr08 1190 38 280954 282116 C 1153 96.10 1307 accept 0 ALIGNMENT 296 YS2-18b19.p1k chr15 801 179 657664 658284 C 623 84.27 1466 accept 0 ALIGNMENT 0 YS2-18b20.q1k chr10 661 622 535230 535229 C 40 0.00 661 accept_chi 1 ALIGNMENT 41 YS2-18b20.q1k vc_2 661 621 2105 2145 C 41 100.00 661 reject_low 3 ALIGNMENT 38 YS2-18b20.q1k vc_7 624 661 13525 13562 F 38 100.00 661 reject_low 7 ALIGNMENT 0 YS2-18b20.q1k vc_4 62 620 5831 5830 F 559 0.00 661 reject_low 5 ALIGNMENT 0 YS2-18b20.q1k vc_1 620 62 2513 2512 C 559 0.00 661 reject_low 2 ALIGNMENT 41 YS2-18b20.q1k vc_3 661 621 2472 2512 C 41 100.00 661 reject_low 4 ALIGNMENT 41 YS2-18b20.q1k vc_1 661 621 2472 2512 C 41 100.00 661 reject_low 2 ALIGNMENT 0 YS2-18b20.q1k vc_3 620 62 2513 2512 C 559 0.00 661 reject_low 4 ALIGNMENT 0 YS2-18b20.q1k vc_5 622 62 5064 5063 C 561 0.00 661 reject_low 6 ALIGNMENT 39 YS2-18b20.q1k vc_5 661 623 5025 5063 C 39 100.00 661 reject_low 6 ALIGNMENT 36 YS2-18b20.q1k vc_5 658 623 1 36 C 36 100.00 661 reject_low 8 ALIGNMENT 0 YS2-18b20.q1k vc_5 622 62 37 36 C 561 0.00 661 reject_low 8 ALIGNMENT 0 YS2-18b20.q1k vc_2 620 62 2146 2145 C 559 0.00 661 reject_low 3 ALIGNMENT 41 YS2-18b20.q1k vc_4 621 661 5831 5871 F 41 100.00 661 reject_low 5 ALIGNMENT 0 YS2-18b20.q1k vc_7 62 623 13525 13524 F 562 0.00 661 reject_low 7 ALIGNMENT 0 YS2-18b20.p1k chr10 616 634 535811 535810 F 19 0.00 634 accept_chi 0 ALIGNMENT 555 YS2-18b20.p1k chr10 33 615 535229 535811 F 583 99.14 634 accept_chi 0 ALIGNMENT 555 YS2-18b20.q1k chr10 621 39 535229 535811 C 583 99.14 661 accept_chi 1 ALIGNMENT 950 YS2-18b21.q1k chr05 1152 29 71530 72673 C 1124 96.09 1252 accept 0 ALIGNMENT 1013 YS2-18b21.p1k chr05 34 1172 66598 67738 F 1139 97.45 1421 accept 0 ALIGNMENT 983 YS2-18b22.p1k chr04 1254 96 1144758 1145936 C 1159 96.46 1432 reject_bad_break 0 ALIGNMENT 24 YS2-18b22.p1k chr04 64 31 1145963 1145994 C 34 94.12 1432 reject_bad_break 0 ALIGNMENT 0 YS2-18b22.p1k chr04 95 65 1145937 1145962 C 31 0.00 1432 reject_bad_break 0 ALIGNMENT 1046 YS2-18b22.q1k chr04 36 1254 1141363 1142599 F 1219 96.47 1304 reject_bad_break 0 ALIGNMENT 856 YS2-18b24.p1k chr16 44 1034 717540 718542 F 991 96.97 1280 accept_chi 1 ALIGNMENT 916 YS2-18b24.q1k chr14 1064 32 131668 132696 C 1033 97.68 1196 accept_chi 0 ALIGNMENT 39 YS2-18c01.q1k vc_5 273 235 5025 5063 C 39 100.00 273 reject_low 5 ALIGNMENT 0 YS2-18c01.q1k vc_1 232 62 2513 2512 C 171 0.00 273 reject_low 2 ALIGNMENT 0 YS2-18c01.q1k vc_3 232 62 2513 2512 C 171 0.00 273 reject_low 3 ALIGNMENT 0 YS2-18c01.q1k vc_4 62 232 5831 5830 F 171 0.00 273 reject_low 4 ALIGNMENT 36 YS2-18c01.q1k vc_5 270 235 1 36 C 36 100.00 273 reject_low 7 ALIGNMENT 183 YS2-18c01.q1k chr13 30 232 815871 816074 F 203 97.54 273 accept_chi 0 ALIGNMENT 38 YS2-18c01.q1k vc_7 236 273 13525 13562 F 38 100.00 273 reject_low 6 ALIGNMENT 108 YS2-18c01.p1k chr13 231 79 815871 816023 C 153 90.85 232 accept_chi 1 ALIGNMENT 41 YS2-18c01.q1k vc_1 273 233 2472 2512 C 41 100.00 273 reject_low 2 ALIGNMENT 41 YS2-18c01.q1k vc_4 233 273 5831 5871 F 41 100.00 273 reject_low 4 ALIGNMENT 0 YS2-18c01.q1k chr13 233 273 816074 816073 F 41 0.00 273 accept_chi 0 ALIGNMENT 41 YS2-18c01.q1k vc_3 273 233 2472 2512 C 41 100.00 273 reject_low 3 ALIGNMENT 0 YS2-18c01.q1k vc_7 62 235 13525 13524 F 174 0.00 273 reject_low 6 ALIGNMENT 0 YS2-18c01.q1k vc_5 234 62 37 36 C 173 0.00 273 reject_low 7 ALIGNMENT 0 YS2-18c01.q1k vc_5 234 62 5064 5063 C 173 0.00 273 reject_low 5 ALIGNMENT 796 YS2-18c02.q1k chr12 1242 30 458095 459259 C 1213 91.51 1321 accept 0 ALIGNMENT 1023 YS2-18c02.p1k chr12 32 1197 463035 464213 F 1166 96.66 1468 accept 1 ALIGNMENT 796 YS2-18c02.q1k chr12 1242 30 467232 468396 C 1213 91.51 1321 accept 1 ALIGNMENT 1023 YS2-18c02.p1k chr12 32 1197 453898 455076 F 1166 96.66 1468 accept 0 ALIGNMENT 0 YS2-18c03.q1k vc_4 305 307 1615 1878 F 3 0.00 704 reject_vc 7 ALIGNMENT 480 YS2-18c03.q1k vc_7 635 1 1938 2569 C 635 92.91 704 reject_vc 2 ALIGNMENT 302 YS2-18c03.q1k vc_3 1 303 2689 2991 F 303 100.00 704 reject_vc 6 ALIGNMENT 0 YS2-18c03.q1k vc_4 237 62 6340 6339 C 176 0.00 704 reject_low 10 ALIGNMENT 0 YS2-18c03.q1k vc_4 62 237 1548 1547 F 176 0.00 704 reject_vc 7 ALIGNMENT 65 YS2-18c03.q1k vc_4 304 238 46 112 C 67 100.00 704 reject_low 9 ALIGNMENT 181 YS2-18c03.q1k vc_4 308 683 1879 2250 F 376 85.11 704 reject_vc 7 ALIGNMENT 396 YS2-18c03.q1k vc_4 420 1 5235 5654 C 420 98.57 704 reject_vc 3 ALIGNMENT 264 YS2-18c03.p1k chr13 333 38 532203 532497 C 296 97.30 352 accept 0 ALIGNMENT 0 YS2-18c03.p1k chr13 352 334 532204 532203 C 19 0.00 352 accept 0 ALIGNMENT 98 YS2-18c03.q1k vc_7 420 305 4586 4699 C 116 96.55 704 reject_vc 8 ALIGNMENT 490 YS2-18c03.q1k vc_5 1 683 2556 3234 F 683 91.80 704 reject_vc 1 ALIGNMENT 0 YS2-18c03.q1k vc_7 304 304 4700 4921 C 1 0.00 704 reject_vc 8 ALIGNMENT 0 YS2-18c03.q1k vc_7 53 54 5172 6360 C 0 0.00 704 reject_vc 8 ALIGNMENT 65 YS2-18c03.q1k vc_4 304 238 6273 6339 C 67 100.00 704 reject_low 10 ALIGNMENT 65 YS2-18c03.q1k vc_4 238 304 1548 1614 F 67 100.00 704 reject_vc 7 ALIGNMENT 247 YS2-18c03.q1k vc_7 303 53 4922 5172 C 251 99.60 704|0,1 reject_vc 8 ALIGNMENT 51 YS2-18c03.q1k vc_7 54 3 6360 6411 C 52 100.00 704|1,0 reject_vc 8 ALIGNMENT 302 YS2-18c03.q1k vc_2 1 303 2322 2624 F 303 100.00 704 reject_vc 5 ALIGNMENT 302 YS2-18c03.q1k vc_1 1 303 2689 2991 F 303 100.00 704 reject_vc 4 ALIGNMENT 0 YS2-18c03.q1k vc_4 237 62 113 112 C 176 0.00 704 reject_low 9 ALIGNMENT 0 YS2-18c05.p1k chrm 176 175 2541 2602 F 0 0.00 1385 accept 0 ALIGNMENT 32 YS2-18c05.q1k chrm 352 265 4018 4108 C 88 84.09 1224 reject_low 4 ALIGNMENT 0 YS2-18c05.q1k chrm 96 271 45140 45139 F 176 0.00 1224 reject_low 1 ALIGNMENT 26 YS2-18c05.p1k chrm 172 307 84761 84894 F 136 77.94 1385 reject_low 3 ALIGNMENT 27 YS2-18c05.p1k chrm 147 179 2512 2544 F 33 96.97 1385|0,4 accept 0 ALIGNMENT 137 YS2-18c05.p1k chrm 172 337 2599 2769 F 166 96.99 1385|4,0 accept 0 ALIGNMENT 0 YS2-18c05.p1k chrm 308 331 84894 84893 F 24 0.00 1385 reject_low 3 ALIGNMENT 29 YS2-18c05.q1k chrm 352 276 12515 12591 C 77 84.42 1224 reject_low 5 ALIGNMENT 0 YS2-18c05.p1k chrm 306 167 76649 76648 C 140 0.00 1385 reject_low 2 ALIGNMENT 22 YS2-18c05.p1k chrm 172 212 56257 56297 F 41 87.80 1385 reject_low 6 ALIGNMENT 44 YS2-18c05.p1k chrm 223 172 55413 55463 C 52 96.15 1385 reject_low 1 ALIGNMENT 0 YS2-18c05.q1k chrm 275 96 12592 12591 C 180 0.00 1224 reject_low 5 ALIGNMENT 24 YS2-18c05.p1k chrm 337 307 76619 76648 C 31 96.77 1385 reject_low 2 ALIGNMENT 0 YS2-18c05.p1k chrm 331 224 55414 55413 C 108 0.00 1385 reject_low 1 ALIGNMENT 0 YS2-18c05.q1k chrm 862 353 12516 12515 C 510 0.00 1224 reject_low 5 ALIGNMENT 39 YS2-18c05.q1k chrm 272 368 45140 45237 F 97 84.54 1224 reject_low 1 ALIGNMENT 0 YS2-18c05.q1k chrm 264 96 4109 4108 C 169 0.00 1224 reject_low 4 ALIGNMENT 0 YS2-18c05.q1k chrm 862 353 4019 4018 C 510 0.00 1224 reject_low 4 ALIGNMENT 565 YS2-18c05.q1k chrm 1014 37 2992 3975 C 978 95.50 1224 accept 0 ALIGNMENT 0 YS2-18c05.q1k chrm 369 862 45237 45236 F 494 0.00 1224 reject_low 1 ALIGNMENT 0 YS2-18c05.p1k chrm 213 331 56297 56296 F 119 0.00 1385 reject_low 6 ALIGNMENT 993 YS2-18c06.q1k chr15 1219 35 1072057 1073255 C 1185 95.86 1221 reject_low 1 ALIGNMENT 1024 YS2-18c06.q1k chr16 35 1219 17614 18811 F 1185 96.71 1221 accept_tel 0 ALIGNMENT 907 YS2-18c06.p1k chr15 30 1117 1071994 1073072 F 1088 95.59 1512 reject_low 1 ALIGNMENT 930 YS2-18c06.p1k chr16 1119 30 17794 18874 C 1090 96.24 1512 accept_tel 0 ALIGNMENT 1039 YS2-18c07.q1k chr16 1185 32 478852 480011 C 1154 97.23 1210 accept 0 ALIGNMENT 983 YS2-18c07.p1k chr16 37 1164 473645 474788 F 1128 96.45 1401 accept 0 ALIGNMENT 964 YS2-18c08.q1k chr08 40 1172 14820 15962 F 1133 95.76 1235 accept 0 ALIGNMENT 942 YS2-18c08.p1k chr08 1088 38 19495 20557 C 1051 97.72 1477 accept 0 ALIGNMENT 0 YS2-18c09.q1k chr12 502 805 510875 510874 F 304 0.00 1248 reject_low 1 ALIGNMENT 0 YS2-18c09.p1k chr12 891 62 510447 510446 C 830 0.00 1418 reject_low 2 ALIGNMENT 0 YS2-18c09.q1k chr12 99 887 510421 510420 F 789 0.00 1248 reject_low 3 ALIGNMENT 0 YS2-18c09.q1k chr12 99 458 510834 510833 F 360 0.00 1248 reject_low 1 ALIGNMENT 38 YS2-18c09.q1k chr12 459 501 510834 510875 F 43 97.67 1248 reject_low 1 ALIGNMENT 21 YS2-18c09.q1k chr12 888 912 510421 510446 F 25 96.00 1248 reject_low 3 ALIGNMENT 907 YS2-18c09.p1k chr12 30 1084 509557 510626 F 1055 96.11 1418 accept 0 ALIGNMENT 26 YS2-18c09.p1k chr12 917 892 510421 510446 C 26 100.00 1418 reject_low 2 ALIGNMENT 930 YS2-18c09.q1k chr12 1154 42 510183 511292 C 1113 95.06 1248 accept 0 ALIGNMENT 635 YS2-18c10.q1k chr12 698 31 846553 847221 C 668 99.85 699 accept_chi 0 ALIGNMENT 627 YS2-18c10.p1k chr12 28 695 846553 847221 F 668 99.40 695 accept_chi 1 ALIGNMENT 964 YS2-18c11.q1k chr09 1258 26 338888 340139 C 1233 93.59 1264 accept_chi 1 ALIGNMENT 912 YS2-18c11.p1k chr04 27 1041 1303205 1304237 F 1015 97.73 1387 accept_chi 0 ALIGNMENT 0 YS2-18c11.q1k chr13 840 824 759806 759805 C 17 0.00 1264 reject_low 2 ALIGNMENT 0 YS2-18c11.q1k chr13 119 92 760509 760508 C 28 0.00 1264 reject_low 2 ALIGNMENT 198 YS2-18c11.q1k chr13 823 120 759805 760508 C 704 76.42 1264 reject_low 2 ALIGNMENT 0 YS2-18c12.q1k chr12 295 255 454523 454522 C 41 0.00 295 accept 0 ALIGNMENT 0 YS2-18c12.q1k vc_2 254 62 2146 2145 C 193 0.00 295 reject_low 3 ALIGNMENT 222 YS2-18c12.q1k chr12 254 32 454522 454744 C 223 100.00 295 accept 0 ALIGNMENT 0 YS2-18c12.q1k vc_3 254 62 2513 2512 C 193 0.00 295 reject_low 4 ALIGNMENT 222 YS2-18c12.q1k chr12 254 32 463659 463881 C 223 100.00 295 accept 1 ALIGNMENT 39 YS2-18c12.q1k vc_5 295 257 5025 5063 C 39 100.00 295 reject_low 6 ALIGNMENT 0 YS2-18c12.q1k chr12 295 255 463660 463659 C 41 0.00 295 accept 1 ALIGNMENT 0 YS2-18c12.q1k vc_5 256 62 37 36 C 195 0.00 295 reject_low 8 ALIGNMENT 38 YS2-18c12.q1k vc_7 258 295 13525 13562 F 38 100.00 295 reject_low 7 ALIGNMENT 0 YS2-18c12.q1k vc_5 256 62 5064 5063 C 195 0.00 295 reject_low 6 ALIGNMENT 0 YS2-18c12.q1k vc_4 62 254 5831 5830 F 193 0.00 295 reject_low 5 ALIGNMENT 41 YS2-18c12.q1k vc_4 255 295 5831 5871 F 41 100.00 295 reject_low 5 ALIGNMENT 41 YS2-18c12.q1k vc_2 295 255 2105 2145 C 41 100.00 295 reject_low 3 ALIGNMENT 0 YS2-18c12.q1k vc_1 254 62 2513 2512 C 193 0.00 295 reject_low 2 ALIGNMENT 41 YS2-18c12.q1k vc_3 295 255 2472 2512 C 41 100.00 295 reject_low 4 ALIGNMENT 41 YS2-18c12.q1k vc_1 295 255 2472 2512 C 41 100.00 295 reject_low 2 ALIGNMENT 0 YS2-18c12.q1k vc_7 62 257 13525 13524 F 196 0.00 295 reject_low 7 ALIGNMENT 36 YS2-18c12.q1k vc_5 292 257 1 36 C 36 100.00 295 reject_low 8 ALIGNMENT 0 YS2-18c13.q1k vc_3 770 62 2513 2512 C 709 0.00 1261 reject_low 20 ALIGNMENT 328 YS2-18c13.q1k vc_2 811 1239 2164 2591 F 429 93.24 1261 reject_low 5 ALIGNMENT 0 YS2-18c13.q1k vc_4 62 770 5831 5830 F 709 0.00 1261 reject_low 15 ALIGNMENT 46 YS2-18c13.q1k vc_7 1020 970 6360 6411 C 51 98.04 1261|1,0 reject_low 14 ALIGNMENT 154 YS2-18c13.q1k vc_4 811 971 126 287 F 161 99.38 1261 reject_low 13 ALIGNMENT 67 YS2-18c13.p1k vc_6 1011 1159 3589 3748 F 149 84.56 1430 reject_low 17 ALIGNMENT 38 YS2-18c13.q1k vc_7 774 811 13525 13562 F 38 100.00 1261 reject_low 23 ALIGNMENT 41 YS2-18c13.q1k vc_3 811 771 2472 2512 C 41 100.00 1261 reject_low 20 ALIGNMENT 0 YS2-18c13.q1k vc_4 62 810 126 125 F 749 0.00 1261 reject_low 13 ALIGNMENT 0 YS2-18c13.p1k vc_7 62 778 100 99 F 717 0.00 1430 reject_low 3 ALIGNMENT 0 YS2-18c13.p1k vc_5 778 62 5026 5025 C 717 0.00 1430 reject_low 2 ALIGNMENT 0 YS2-18c13.p1k vc_4 62 778 5871 5870 F 717 0.00 1430 reject_low 12 ALIGNMENT 0 YS2-18c13.q1k vc_7 969 62 6412 6411 C 908 0.00 1261 reject_low 14 ALIGNMENT 154 YS2-18c13.q1k vc_4 811 971 6353 6514 F 161 99.38 1261|1,0 reject_low 15 ALIGNMENT 0 YS2-18c13.q1k vc_3 883 812 2473 2472 C 72 0.00 1261 reject_low 20 ALIGNMENT 268 YS2-18c13.p1k vc_4 779 1121 5871 6219 F 343 93.29 1430 reject_low 12 ALIGNMENT 328 YS2-18c13.q1k vc_7 1239 811 2300 2727 C 429 93.24 1261 reject_low 3 ALIGNMENT 0 YS2-18c13.p1k vc_7 62 778 13562 13561 F 717 0.00 1430 reject_low 11 ALIGNMENT 328 YS2-18c13.q1k vc_1 811 1239 2531 2958 F 429 93.24 1261 reject_low 4 ALIGNMENT 41 YS2-18c13.q1k vc_1 811 771 2472 2512 C 41 100.00 1261 reject_low 18 ALIGNMENT 0 YS2-18c13.p1k vc_1 778 62 2473 2472 C 717 0.00 1430 reject_low 25 ALIGNMENT 39 YS2-18c13.q1k vc_5 811 773 5025 5063 C 39 100.00 1261 reject_low 21 ALIGNMENT 0 YS2-18c13.p1k vc_3 848 810 2442 2441 C 39 0.00 1430 reject_low 26 ALIGNMENT 0 YS2-18c13.q1k vc_2 62 810 2164 2163 F 749 0.00 1261 reject_low 5 ALIGNMENT 0 YS2-18c13.q1k vc_4 810 62 5813 5812 C 749 0.00 1261 reject_low 7 ALIGNMENT 0 YS2-18c13.q1k vc_2 770 62 2146 2145 C 709 0.00 1261 reject_low 19 ALIGNMENT 0 YS2-18c13.q1k vc_7 62 773 63 62 F 712 0.00 1261 reject_low 22 ALIGNMENT 328 YS2-18c13.q1k vc_3 811 1239 2531 2958 F 429 93.24 1261 reject_low 6 ALIGNMENT 0 YS2-18c13.q1k vc_4 810 62 1535 1534 C 749 0.00 1261 reject_low 16 ALIGNMENT 328 YS2-18c13.q1k vc_5 811 1239 2398 2825 F 429 93.24 1261 reject_low 2 ALIGNMENT 0 YS2-18c13.q1k vc_5 772 62 37 36 C 711 0.00 1261 reject_low 24 ALIGNMENT 0 YS2-18c13.q1k vc_7 1019 1020 5172 6360 C 0 0.00 1261 reject_low 14 ALIGNMENT 0 YS2-18c13.q1k vc_7 62 773 13525 13524 F 712 0.00 1261 reject_low 23 ALIGNMENT 38 YS2-18c13.q1k vc_7 774 811 63 100 F 38 100.00 1261 reject_low 22 ALIGNMENT 0 YS2-18c13.q1k vc_7 812 883 100 99 F 72 0.00 1261 reject_low 22 ALIGNMENT 0 YS2-18c13.p1k vc_2 778 62 2106 2105 C 717 0.00 1430 reject_low 9 ALIGNMENT 695 YS2-18c13.p1k chr08 761 31 348503 349235 C 731 99.32 1430 accept_chi 1 ALIGNMENT 36 YS2-18c13.q1k vc_5 808 773 1 36 C 36 100.00 1261 reject_low 24 ALIGNMENT 0 YS2-18c13.q1k vc_5 772 62 5064 5063 C 711 0.00 1261 reject_low 21 ALIGNMENT 41 YS2-18c13.q1k vc_2 811 771 2105 2145 C 41 100.00 1261 reject_low 19 ALIGNMENT 0 YS2-18c13.p1k vc_3 778 62 2106 2105 C 717 0.00 1430 reject_low 10 ALIGNMENT 0 YS2-18c13.q1k vc_1 883 812 2473 2472 C 72 0.00 1261 reject_low 18 ALIGNMENT 41 YS2-18c13.q1k vc_4 771 811 5831 5871 F 41 100.00 1261 reject_low 15 ALIGNMENT 273 YS2-18c13.p1k vc_5 1163 779 4628 5025 C 385 91.43 1430 reject_low 2 ALIGNMENT 0 YS2-18c13.q1k chr08 771 883 349235 349234 F 113 0.00 1261 accept_chi 0 ALIGNMENT 0 YS2-18c13.q1k vc_2 883 812 2106 2105 C 72 0.00 1261 reject_low 19 ALIGNMENT 0 YS2-18c13.q1k vc_1 770 62 2513 2512 C 709 0.00 1261 reject_low 18 ALIGNMENT 700 YS2-18c13.q1k chr08 39 770 348503 349235 F 732 99.45 1261 accept_chi 0 ALIGNMENT 0 YS2-18c13.p1k vc_1 848 810 2442 2441 C 39 0.00 1430 reject_low 25 ALIGNMENT 0 YS2-18c13.q1k vc_7 810 62 2728 2727 C 749 0.00 1261 reject_low 3 ALIGNMENT 321 YS2-18c13.q1k vc_4 1239 811 5383 5812 C 429 92.77 1261 reject_low 7 ALIGNMENT 26 YS2-18c13.p1k vc_3 809 779 2441 2472 C 31 96.77 1430 reject_low 26 ALIGNMENT 0 YS2-18c13.q1k vc_1 62 810 2531 2530 F 749 0.00 1261 reject_low 4 ALIGNMENT 0 YS2-18c13.q1k vc_5 883 812 5026 5025 C 72 0.00 1261 reject_low 21 ALIGNMENT 273 YS2-18c13.p1k vc_1 1163 779 1708 2105 C 385 91.43 1430 reject_low 8 ALIGNMENT 0 YS2-18c13.q1k vc_5 62 810 2398 2397 F 749 0.00 1261 reject_low 2 ALIGNMENT 87 YS2-18c13.q1k vc_4 899 811 1446 1534 C 89 100.00 1261 reject_low 16 ALIGNMENT 0 YS2-18c13.q1k vc_3 62 810 2531 2530 F 749 0.00 1261 reject_low 6 ALIGNMENT 0 YS2-18c13.p1k vc_3 778 62 2473 2472 C 717 0.00 1430 reject_low 26 ALIGNMENT 26 YS2-18c13.p1k vc_1 809 779 2441 2472 C 31 96.77 1430 reject_low 25 ALIGNMENT 273 YS2-18c13.p1k vc_3 1163 779 1708 2105 C 385 91.43 1430 reject_low 10 ALIGNMENT 127 YS2-18c13.q1k vc_7 1239 1019 4955 5172 C 221 87.33 1261|0,1 reject_low 14 ALIGNMENT 0 YS2-18c13.q1k vc_7 812 883 13562 13561 F 72 0.00 1261 reject_low 23 ALIGNMENT 0 YS2-18c13.p1k chr08 848 762 348504 348503 C 87 0.00 1430 accept_chi 1 ALIGNMENT 0 YS2-18c13.q1k vc_5 883 809 2 1 C 75 0.00 1261 reject_low 24 ALIGNMENT 0 YS2-18c13.q1k vc_4 812 811 5872 6353 F 0 0.00 1261 reject_low 15 ALIGNMENT 0 YS2-18c13.p1k vc_1 778 62 2106 2105 C 717 0.00 1430 reject_low 8 ALIGNMENT 0 YS2-18c13.p1k vc_6 62 1010 3589 3588 F 949 0.00 1430 reject_low 17 ALIGNMENT 273 YS2-18c13.p1k vc_7 779 1159 13562 13954 F 381 91.60 1430 reject_low 11 ALIGNMENT 273 YS2-18c13.p1k vc_2 1163 779 1708 2105 C 385 91.43 1430 reject_low 9 ALIGNMENT 273 YS2-18c13.p1k vc_7 779 1159 100 492 F 381 91.60 1430 reject_low 3 ALIGNMENT 0 YS2-18c14.p1k chr13 124 62 761884 761883 C 63 0.00 1524 reject_low 1 ALIGNMENT 1010 YS2-18c14.q1k chr09 39 1174 338113 339247 F 1136 97.18 1288 accept 0 ALIGNMENT 139 YS2-18c14.p1k chr13 542 125 761466 761883 C 418 79.19 1524 reject_low 1 ALIGNMENT 978 YS2-18c14.p1k chr09 1170 39 340352 341504 C 1132 96.73 1524 accept 0 ALIGNMENT 0 YS2-18c14.p1k chr13 833 543 761467 761466 C 291 0.00 1524 reject_low 1 ALIGNMENT 0 YS2-18c16.q1k vc_5 393 62 5064 5063 C 332 0.00 432 reject_low 5 ALIGNMENT 41 YS2-18c16.q1k vc_3 432 392 2472 2512 C 41 100.00 432 reject_low 3 ALIGNMENT 0 YS2-18c16.q1k chr11 394 432 444373 444372 F 39 0.00 432 accept_chi 0 ALIGNMENT 41 YS2-18c16.q1k vc_4 392 432 5831 5871 F 41 100.00 432 reject_low 4 ALIGNMENT 0 YS2-18c16.q1k vc_7 62 394 13525 13524 F 333 0.00 432 reject_low 6 ALIGNMENT 0 YS2-18c16.p1k chr11 413 395 444008 444007 C 19 0.00 413 accept_chi 1 ALIGNMENT 0 YS2-18c16.q1k vc_4 62 391 5831 5830 F 330 0.00 432 reject_low 4 ALIGNMENT 41 YS2-18c16.q1k vc_1 432 392 2472 2512 C 41 100.00 432 reject_low 2 ALIGNMENT 38 YS2-18c16.q1k vc_7 395 432 13525 13562 F 38 100.00 432 reject_low 6 ALIGNMENT 0 YS2-18c16.q1k vc_1 391 62 2513 2512 C 330 0.00 432 reject_low 2 ALIGNMENT 39 YS2-18c16.q1k vc_5 432 394 5025 5063 C 39 100.00 432 reject_low 5 ALIGNMENT 348 YS2-18c16.p1k chr11 394 28 444007 444373 C 367 99.46 413 accept_chi 1 ALIGNMENT 36 YS2-18c16.q1k vc_5 429 394 1 36 C 36 100.00 432 reject_low 7 ALIGNMENT 350 YS2-18c16.q1k chr11 27 393 444007 444373 F 367 99.73 432 accept_chi 0 ALIGNMENT 0 YS2-18c16.q1k vc_5 393 62 37 36 C 332 0.00 432 reject_low 7 ALIGNMENT 0 YS2-18c16.q1k vc_3 391 62 2513 2512 C 330 0.00 432 reject_low 3 ALIGNMENT 42 YS2-18c18.q1k vc_4 487 529 5829 5871 F 43 100.00 529 reject_low 5 ALIGNMENT 422 YS2-18c18.p1k chr08 476 27 103906 104356 C 450 99.11 495 accept_chi 1 ALIGNMENT 38 YS2-18c18.q1k vc_7 492 529 13525 13562 F 38 100.00 529 reject_low 7 ALIGNMENT 42 YS2-18c18.q1k vc_1 529 487 2472 2514 C 43 100.00 529 reject_low 2 ALIGNMENT 426 YS2-18c18.q1k chr08 39 489 103906 104356 F 451 99.33 529 accept_chi 0 ALIGNMENT 39 YS2-18c18.q1k vc_5 529 491 5025 5063 C 39 100.00 529 reject_low 6 ALIGNMENT 42 YS2-18c18.q1k vc_2 529 487 2105 2147 C 43 100.00 529 reject_low 3 ALIGNMENT 0 YS2-18c18.q1k vc_4 62 486 5829 5828 F 425 0.00 529 reject_low 5 ALIGNMENT 36 YS2-18c18.q1k vc_5 526 491 1 36 C 36 100.00 529 reject_low 8 ALIGNMENT 0 YS2-18c18.q1k vc_5 490 62 37 36 C 429 0.00 529 reject_low 8 ALIGNMENT 0 YS2-18c18.q1k vc_3 486 62 2515 2514 C 425 0.00 529 reject_low 4 ALIGNMENT 42 YS2-18c18.q1k vc_3 529 487 2472 2514 C 43 100.00 529 reject_low 4 ALIGNMENT 0 YS2-18c18.q1k vc_2 486 62 2148 2147 C 425 0.00 529 reject_low 3 ALIGNMENT 0 YS2-18c18.q1k chr08 490 529 104356 104355 F 40 0.00 529 accept_chi 0 ALIGNMENT 0 YS2-18c18.p1k chr08 495 477 103907 103906 C 19 0.00 495 accept_chi 1 ALIGNMENT 0 YS2-18c18.q1k vc_7 62 491 13525 13524 F 430 0.00 529 reject_low 7 ALIGNMENT 0 YS2-18c18.q1k vc_5 490 62 5064 5063 C 429 0.00 529 reject_low 6 ALIGNMENT 0 YS2-18c18.q1k vc_1 486 62 2515 2514 C 425 0.00 529 reject_low 2 ALIGNMENT 348 YS2-18c20.p1k chr02 33 387 610546 610900 F 355 99.44 405 accept_chi 0 ALIGNMENT 0 YS2-18c20.q1k vc_5 391 62 5068 5067 C 330 0.00 434 reject_low 6 ALIGNMENT 0 YS2-18c20.q1k vc_2 393 62 2146 2145 C 332 0.00 434 reject_low 3 ALIGNMENT 0 YS2-18c20.q1k vc_5 391 62 41 40 C 330 0.00 434 reject_low 8 ALIGNMENT 0 YS2-18c20.p1k chr02 388 405 610900 610899 F 18 0.00 405 accept_chi 0 ALIGNMENT 41 YS2-18c20.q1k vc_3 434 394 2472 2512 C 41 100.00 434 reject_low 4 ALIGNMENT 0 YS2-18c20.q1k vc_7 62 396 13525 13524 F 335 0.00 434 reject_low 7 ALIGNMENT 0 YS2-18c20.q1k vc_3 393 62 2513 2512 C 332 0.00 434 reject_low 4 ALIGNMENT 350 YS2-18c20.q1k chr02 394 38 610544 610900 C 357 99.44 434 accept_chi 1 ALIGNMENT 38 YS2-18c20.q1k vc_7 397 434 13525 13562 F 38 100.00 434 reject_low 7 ALIGNMENT 40 YS2-18c20.q1k vc_5 434 392 5025 5067 C 43 97.67 434 reject_low 6 ALIGNMENT 41 YS2-18c20.q1k vc_4 394 434 5831 5871 F 41 100.00 434 reject_low 5 ALIGNMENT 41 YS2-18c20.q1k vc_1 434 394 2472 2512 C 41 100.00 434 reject_low 2 ALIGNMENT 0 YS2-18c20.q1k chr02 434 395 610545 610544 C 40 0.00 434 accept_chi 1 ALIGNMENT 0 YS2-18c20.q1k vc_4 62 393 5831 5830 F 332 0.00 434 reject_low 5 ALIGNMENT 37 YS2-18c20.q1k vc_5 431 392 1 40 C 40 97.50 434 reject_low 8 ALIGNMENT 0 YS2-18c20.q1k vc_1 393 62 2513 2512 C 332 0.00 434 reject_low 2 ALIGNMENT 41 YS2-18c20.q1k vc_2 434 394 2105 2145 C 41 100.00 434 reject_low 3 ALIGNMENT 876 YS2-18c22.p1k chr10 1097 40 457852 458912 C 1058 95.84 1458 accept_chi 1 ALIGNMENT 946 YS2-18c22.q1k chr10 28 1098 457854 458918 F 1071 97.85 1240 accept_chi 0 ALIGNMENT 0 YS2-18c23.q1k chr16 626 566 15500 15496 C 61 0.00 1278 reject_low 1 ALIGNMENT 102 YS2-18c23.q1k chr16 796 627 15330 15499 C 170 87.06 1278 reject_low 1 ALIGNMENT 314 YS2-18c23.q1k chr15 271 885 1075283 1075889 F 615 84.88 1278 accept_tel 0 ALIGNMENT 186 YS2-18c23.q1k chr16 565 271 15497 15791 C 295 87.80 1278 reject_low 1 ALIGNMENT 874 YS2-18d01.q1k chr13 41 1040 829690 830703 F 1000 97.40 1235 accept 0 ALIGNMENT 1007 YS2-18d01.p1k chr13 1145 36 833653 834767 C 1110 98.11 1460 accept 0 ALIGNMENT 965 YS2-18d02.p1k chr02 1126 28 65359 66450 C 1099 97.27 1440 accept 0 ALIGNMENT 0 YS2-18d02.p1k chr15 508 62 236336 236335 C 447 0.00 1440 reject_low 2 ALIGNMENT 1001 YS2-18d02.q1k chr02 37 1213 64091 65282 F 1177 96.01 1298 accept 0 ALIGNMENT 0 YS2-18d02.p1k chr02 559 816 464251 464250 F 258 0.00 1440 reject_low 1 ALIGNMENT 32 YS2-18d02.p1k chr02 497 558 464190 464251 F 62 91.94 1440 reject_low 1 ALIGNMENT 21 YS2-18d02.p1k chr15 558 509 236286 236335 C 50 90.00 1440 reject_low 2 ALIGNMENT 0 YS2-18d02.p1k chr02 62 496 464190 464189 F 435 0.00 1440 reject_low 1 ALIGNMENT 0 YS2-18d02.p1k chr15 816 559 236287 236286 C 258 0.00 1440 reject_low 2 ALIGNMENT 962 YS2-18d04.q1k chr04 37 1127 312519 313631 F 1091 97.34 1213 accept 0 ALIGNMENT 1019 YS2-18d04.p1k chr04 1179 32 316153 317315 C 1148 97.39 1454 accept 0 ALIGNMENT 1032 YS2-18d06.q1k chr08 1214 30 222086 223281 C 1185 96.54 1221 accept 0 ALIGNMENT 993 YS2-18d06.p1k chr08 26 1135 218273 219389 F 1110 97.03 1460 accept 0 ALIGNMENT 605 YS2-18d07.p1k chrm 151 979 31023 31833 F 829 95.30 1464 accept 0 ALIGNMENT 0 YS2-18d07.p1k chrm 687 213 69053 69052 C 475 0.00 1464 reject_low 2 ALIGNMENT 0 YS2-18d07.q1k chrm 641 544 31339 31338 C 98 0.00 1302 accept 0 ALIGNMENT 582 YS2-18d07.q1k chrm 987 134 30907 31736 C 854 93.91 1302 reject_low 1 ALIGNMENT 346 YS2-18d07.q1k chrm 543 37 31338 31832 C 507 96.45 1302 accept 0 ALIGNMENT 0 YS2-18d07.q1k chrm 133 95 31737 31736 C 39 0.00 1302 reject_low 1 ALIGNMENT 32 YS2-18d07.p1k chrm 212 165 69052 69098 C 48 91.67 1464 reject_low 2 ALIGNMENT 0 YS2-18d09.q1k chr12 852 606 242677 242676 C 247 0.00 1258 reject_low 1 ALIGNMENT 1029 YS2-18d09.q1k chr07 1218 36 920493 921689 C 1183 96.79 1258 accept 0 ALIGNMENT 916 YS2-18d09.p1k chr07 31 1071 916990 918039 F 1041 97.31 1474 accept 0 ALIGNMENT 408 YS2-18d09.q1k chr12 605 54 242676 243227 C 552 91.49 1258 reject_low 1 ALIGNMENT 292 YS2-18d10.p1k chr07 32 1043 24205 25213 F 1012 77.27 1491 reject_low 1 ALIGNMENT 1038 YS2-18d10.q1k chr06 39 1258 250030 251264 F 1220 95.57 1271 accept 0 ALIGNMENT 1003 YS2-18d10.p1k chr06 1169 30 253618 254768 C 1140 96.67 1491 accept 0 ALIGNMENT 953 YS2-18d11.q1k chr02 32 1141 615992 617120 F 1110 96.31 1301 accept 0 ALIGNMENT 956 YS2-18d11.p1k chr02 1230 41 619328 620524 C 1190 95.04 1521 accept 0 ALIGNMENT 522 YS2-18d12.q1k chr10 1103 337 338416 339187 C 767 89.44 1309 reject_low 2 ALIGNMENT 1003 YS2-18d12.q1k chr10 28 1193 453285 454464 F 1166 95.88 1309 accept 0 ALIGNMENT 637 YS2-18d12.q1k chr07 339 1193 882817 883684 F 855 91.93 1309 reject_low 1 ALIGNMENT 0 YS2-18d12.q1k chr10 336 62 339188 339187 C 275 0.00 1309 reject_low 2 ALIGNMENT 1018 YS2-18d12.p1k chr10 1165 31 457816 458950 C 1135 98.24 1481 accept 0 ALIGNMENT 0 YS2-18d12.q1k chr07 62 338 882817 882816 F 277 0.00 1309 reject_low 1 ALIGNMENT 119 YS2-18d13.p1k vc_1 420 191 1853 2102 C 230 86.96 765 reject_low 1 ALIGNMENT 0 YS2-18d13.p1k vc_3 190 62 2103 2102 C 129 0.00 765 reject_low 3 ALIGNMENT 119 YS2-18d13.p1k vc_4 191 420 5874 6123 F 230 86.96 765 reject_low 4 ALIGNMENT 0 YS2-18d13.p1k vc_1 190 62 2470 2469 C 129 0.00 765 reject_low 6 ALIGNMENT 157 YS2-18d13.p1k scplasm1 1 170 4313 4483 F 170 99.41 765 accept 0 ALIGNMENT 119 YS2-18d13.p1k vc_2 420 191 1853 2102 C 230 86.96 765 reject_low 2 ALIGNMENT 0 YS2-18d13.p1k vc_2 190 62 2103 2102 C 129 0.00 765 reject_low 2 ALIGNMENT 118 YS2-18d13.p1k vc_7 191 415 13565 13808 F 225 87.11 765 reject_low 5 ALIGNMENT 0 YS2-18d13.p1k vc_7 62 190 13565 13564 F 129 0.00 765 reject_low 5 ALIGNMENT 20 YS2-18d13.p1k vc_3 218 191 2441 2469 C 28 92.86 765 reject_low 7 ALIGNMENT 20 YS2-18d13.p1k vc_1 218 191 2441 2469 C 28 92.86 765 reject_low 6 ALIGNMENT 0 YS2-18d13.p1k vc_3 190 62 2470 2469 C 129 0.00 765 reject_low 7 ALIGNMENT 119 YS2-18d13.p1k vc_3 420 191 1853 2102 C 230 86.96 765 reject_low 3 ALIGNMENT 0 YS2-18d13.p1k vc_4 62 190 5874 5873 F 129 0.00 765 reject_low 4 ALIGNMENT 0 YS2-18d13.p1k vc_1 190 62 2103 2102 C 129 0.00 765 reject_low 1 ALIGNMENT 915 YS2-18d14.p1k chr15 29 1143 425970 427113 F 1115 96.05 1427 accept 0 ALIGNMENT 1000 YS2-18d14.q1k chr15 1208 45 428168 429334 C 1164 96.22 1275 accept 0 ALIGNMENT 42 YS2-18d15.q1k vc_3 300 259 2472 2513 C 42 100.00 300 reject_low 2 ALIGNMENT 42 YS2-18d15.q1k vc_4 259 300 5830 5871 F 42 100.00 300 reject_low 3 ALIGNMENT 0 YS2-18d15.q1k vc_4 62 258 5830 5829 F 197 0.00 300 reject_low 3 ALIGNMENT 36 YS2-18d15.q1k vc_5 297 262 1 36 C 36 100.00 300 reject_low 6 ALIGNMENT 211 YS2-18d15.q1k chr13 29 259 741656 741888 F 231 98.70 300 accept 0 ALIGNMENT 0 YS2-18d15.q1k vc_7 62 262 13525 13524 F 201 0.00 300 reject_low 5 ALIGNMENT 0 YS2-18d15.q1k vc_5 261 62 5064 5063 C 200 0.00 300 reject_low 4 ALIGNMENT 0 YS2-18d15.q1k vc_1 258 62 2514 2513 C 197 0.00 300 reject_low 1 ALIGNMENT 0 YS2-18d15.q1k vc_3 258 62 2514 2513 C 197 0.00 300 reject_low 2 ALIGNMENT 0 YS2-18d15.q1k chr13 260 300 741888 741887 F 41 0.00 300 accept 0 ALIGNMENT 38 YS2-18d15.q1k vc_7 263 300 13525 13562 F 38 100.00 300 reject_low 5 ALIGNMENT 42 YS2-18d15.q1k vc_1 300 259 2472 2513 C 42 100.00 300 reject_low 1 ALIGNMENT 39 YS2-18d15.q1k vc_5 300 262 5025 5063 C 39 100.00 300 reject_low 4 ALIGNMENT 0 YS2-18d15.q1k vc_5 261 62 37 36 C 200 0.00 300 reject_low 6 ALIGNMENT 618 YS2-18d16.p1k chr15 28 656 20413 21041 F 629 100.00 1423 ambiguous_tel 0 ALIGNMENT 0 YS2-18d16.p1k vc_3 841 706 2442 2441 C 136 0.00 1423 reject_low 24 ALIGNMENT 0 YS2-18d16.p1k vc_1 674 62 2473 2472 C 613 0.00 1423 reject_low 23 ALIGNMENT 51 YS2-18d16.q1k vc_7 909 858 6360 6411 C 52 100.00 1338 reject_low 14 ALIGNMENT 0 YS2-18d16.q1k vc_5 62 698 2398 2397 F 637 0.00 1338 reject_low 2 ALIGNMENT 0 YS2-18d16.p1k vc_4 62 674 5871 5870 F 613 0.00 1423 reject_low 8 ALIGNMENT 0 YS2-18d16.p1k vc_1 841 706 2442 2441 C 136 0.00 1423 reject_low 23 ALIGNMENT 0 YS2-18d16.q1k vc_1 62 698 2531 2530 F 637 0.00 1338 reject_low 10 ALIGNMENT 0 YS2-18d16.q1k chr15 815 661 20414 20413 C 155 0.00 1338 ambiguous_tel 1 ALIGNMENT 374 YS2-18d16.q1k vc_1 699 1156 2531 2988 F 458 94.76 1338 reject_low 10 ALIGNMENT 374 YS2-18d16.q1k vc_3 699 1156 2531 2988 F 458 94.76 1338 reject_low 12 ALIGNMENT 40 YS2-18d16.q1k vc_2 699 660 2105 2144 C 40 100.00 1338 reject_low 18 ALIGNMENT 0 YS2-18d16.q1k vc_3 62 698 2531 2530 F 637 0.00 1338 reject_low 12 ALIGNMENT 0 YS2-18d16.p1k vc_5 674 62 5026 5025 C 613 0.00 1423 reject_low 2 ALIGNMENT 0 YS2-18d16.q1k vc_2 62 698 2164 2163 F 637 0.00 1338 reject_low 11 ALIGNMENT 0 YS2-18d16.q1k vc_7 698 62 2728 2727 C 637 0.00 1338 reject_low 3 ALIGNMENT 0 YS2-18d16.q1k vc_2 659 62 2145 2144 C 598 0.00 1338 reject_low 18 ALIGNMENT 0 YS2-18d16.q1k vc_7 857 62 6412 6411 C 796 0.00 1338 reject_low 14 ALIGNMENT 0 YS2-18d16.p1k chr15 657 841 21041 21040 F 185 0.00 1423 ambiguous_tel 0 ALIGNMENT 40 YS2-18d16.q1k vc_1 699 660 2472 2511 C 40 100.00 1338 reject_low 17 ALIGNMENT 263 YS2-18d16.p1k vc_4 675 1007 5871 6219 F 333 94.59 1423 reject_low 8 ALIGNMENT 155 YS2-18d16.q1k vc_4 699 859 6353 6514 F 161 99.38 1338|1,0 reject_low 15 ALIGNMENT 265 YS2-18d16.p1k vc_7 675 1020 100 463 F 346 93.93 1423 reject_low 3 ALIGNMENT 0 YS2-18d16.q1k vc_4 815 788 1447 1446 C 28 0.00 1338 reject_low 16 ALIGNMENT 374 YS2-18d16.q1k vc_2 699 1156 2164 2621 F 458 94.76 1338 reject_low 11 ALIGNMENT 0 YS2-18d16.q1k vc_2 815 700 2106 2105 C 116 0.00 1338 reject_low 18 ALIGNMENT 0 YS2-18d16.q1k vc_4 698 62 5813 5812 C 637 0.00 1338 reject_low 9 ALIGNMENT 0 YS2-18d16.q1k vc_4 698 62 1535 1534 C 637 0.00 1338 reject_low 16 ALIGNMENT 0 YS2-18d16.p1k vc_1 674 62 2106 2105 C 613 0.00 1423 reject_low 4 ALIGNMENT 0 YS2-18d16.q1k vc_7 911 910 5169 6359 C 2 0.00 1338 reject_low 14 ALIGNMENT 38 YS2-18d16.q1k vc_7 662 699 13525 13562 F 38 100.00 1338 reject_low 21 ALIGNMENT 265 YS2-18d16.p1k vc_7 675 1020 13562 13925 F 346 93.93 1423 reject_low 7 ALIGNMENT 0 YS2-18d16.q1k vc_1 659 62 2512 2511 C 598 0.00 1338 reject_low 17 ALIGNMENT 613 YS2-18d16.q1k chr15 660 33 20413 21041 C 628 99.84 1338 ambiguous_tel 1 ALIGNMENT 265 YS2-18d16.p1k vc_3 1020 675 1742 2105 C 346 93.93 1423 reject_low 6 ALIGNMENT 40 YS2-18d16.q1k vc_3 699 660 2472 2511 C 40 100.00 1338 reject_low 19 ALIGNMENT 0 YS2-18d16.q1k vc_7 700 815 13562 13561 F 116 0.00 1338 reject_low 21 ALIGNMENT 379 YS2-18d16.q1k vc_7 1216 699 2206 2727 C 518 92.08 1338 reject_low 3 ALIGNMENT 0 YS2-18d16.q1k vc_5 660 62 5064 5063 C 599 0.00 1338 reject_low 20 ALIGNMENT 0 YS2-18d16.q1k vc_3 659 62 2512 2511 C 598 0.00 1338 reject_low 19 ALIGNMENT 0 YS2-18d16.p1k vc_7 62 674 13562 13561 F 613 0.00 1423 reject_low 7 ALIGNMENT 380 YS2-18d16.q1k vc_4 1244 699 5257 5812 C 546 91.21 1338 reject_low 9 ALIGNMENT 170 YS2-18d16.q1k vc_7 1156 912 4925 5168 C 245 91.02 1338 reject_low 14 ALIGNMENT 0 YS2-18d16.q1k vc_4 62 698 126 125 F 637 0.00 1338 reject_low 13 ALIGNMENT 265 YS2-18d16.p1k vc_5 1020 675 4662 5025 C 346 93.93 1423 reject_low 2 ALIGNMENT 384 YS2-18d16.q1k vc_5 699 1279 2398 2991 F 581 90.02 1338 reject_low 2 ALIGNMENT 0 YS2-18d16.q1k vc_4 700 699 5872 6353 F 0 0.00 1338 reject_low 15 ALIGNMENT 265 YS2-18d16.p1k vc_2 1020 675 1742 2105 C 346 93.93 1423 reject_low 5 ALIGNMENT 0 YS2-18d16.q1k vc_7 62 661 13525 13524 F 600 0.00 1338 reject_low 21 ALIGNMENT 26 YS2-18d16.p1k vc_1 705 675 2441 2472 C 31 96.77 1423 reject_low 23 ALIGNMENT 39 YS2-18d16.q1k vc_5 699 661 5025 5063 C 39 100.00 1338 reject_low 20 ALIGNMENT 0 YS2-18d16.p1k vc_3 674 62 2106 2105 C 613 0.00 1423 reject_low 6 ALIGNMENT 0 YS2-18d16.p1k vc_3 674 62 2473 2472 C 613 0.00 1423 reject_low 24 ALIGNMENT 0 YS2-18d16.p1k vc_2 674 62 2106 2105 C 613 0.00 1423 reject_low 5 ALIGNMENT 0 YS2-18d16.q1k vc_5 815 700 5026 5025 C 116 0.00 1338 reject_low 20 ALIGNMENT 0 YS2-18d16.q1k vc_5 815 697 2 1 C 119 0.00 1338 reject_low 22 ALIGNMENT 0 YS2-18d16.q1k vc_4 62 659 5832 5831 F 598 0.00 1338 reject_low 15 ALIGNMENT 0 YS2-18d16.q1k vc_5 660 62 37 36 C 599 0.00 1338 reject_low 22 ALIGNMENT 26 YS2-18d16.p1k vc_3 705 675 2441 2472 C 31 96.77 1423 reject_low 24 ALIGNMENT 87 YS2-18d16.q1k vc_4 787 699 1446 1534 C 89 100.00 1338 reject_low 16 ALIGNMENT 0 YS2-18d16.p1k vc_7 62 674 100 99 F 613 0.00 1423 reject_low 3 ALIGNMENT 155 YS2-18d16.q1k vc_4 699 859 126 287 F 161 99.38 1338 reject_low 13 ALIGNMENT 40 YS2-18d16.q1k vc_4 660 699 5832 5871 F 40 100.00 1338 reject_low 15 ALIGNMENT 265 YS2-18d16.p1k vc_1 1020 675 1742 2105 C 346 93.93 1423 reject_low 4 ALIGNMENT 36 YS2-18d16.q1k vc_5 696 661 1 36 C 36 100.00 1338 reject_low 22 ALIGNMENT 0 YS2-18d16.q1k vc_1 815 700 2473 2472 C 116 0.00 1338 reject_low 17 ALIGNMENT 0 YS2-18d16.q1k vc_3 815 700 2473 2472 C 116 0.00 1338 reject_low 19 ALIGNMENT 0 YS2-18d17.q1k chr12 766 62 92655 92654 C 705 0.00 1301 reject_low 31 ALIGNMENT 0 YS2-18d17.q1k chr09 890 62 205557 205556 C 829 0.00 1301 reject_low 9 ALIGNMENT 0 YS2-18d17.q1k chr06 771 62 101473 101472 C 710 0.00 1301 reject_low 34 ALIGNMENT 0 YS2-18d17.p1k chr01 863 865 182703 183137 F 3 0.00 1443 reject_low 44 ALIGNMENT 504 YS2-18d17.p1k chr08 608 34 389513 390088 C 575 97.91 1443|2,0 reject_bad_break 0 ALIGNMENT 0 YS2-18d17.q1k chr07 890 62 712550 712549 C 829 0.00 1301 reject_low 8 ALIGNMENT 64 YS2-18d17.p1k chr16 784 862 856551 856629 F 79 96.20 1443 reject_low 3 ALIGNMENT 105 YS2-18d17.q1k chr14 874 756 568116 568233 C 119 96.64 1301 reject_low 16 ALIGNMENT 0 YS2-18d17.p1k chr02 62 865 226626 226625 F 804 0.00 1443 reject_low 17 ALIGNMENT 0 YS2-18d17.q1k chr13 62 771 196068 196067 F 710 0.00 1301 reject_low 32 ALIGNMENT 0 YS2-18d17.p1k chr11 865 62 458113 458112 C 804 0.00 1443 reject_low 24 ALIGNMENT 0 YS2-18d17.q1k chr01 758 62 139269 139268 C 697 0.00 1301 reject_low 22 ALIGNMENT 0 YS2-18d17.p1k chr02 62 865 259578 259577 F 804 0.00 1443 reject_low 18 ALIGNMENT 146 YS2-18d17.p1k chr03 866 1084 151520 151742 F 219 92.69 1443 reject_low 27 ALIGNMENT 0 YS2-18d17.q1k chr14 890 62 726576 726575 C 829 0.00 1301 reject_low 14 ALIGNMENT 96 YS2-18d17.q1k chr15 1129 891 854387 854612 C 239 84.94 1301 reject_low 6 ALIGNMENT 118 YS2-18d17.p1k chr01 866 1084 183138 183361 F 219 88.13 1443 reject_low 44 ALIGNMENT 72 YS2-18d17.p1k chr01 774 862 182614 182702 F 89 95.51 1443 reject_low 2,44 ALIGNMENT 0 YS2-18d17.p1k chr05 773 62 498506 498505 C 712 0.00 1443 reject_low 1 ALIGNMENT 198 YS2-18d17.p1k chr05 1084 774 498185 498505 C 311 91.00 1443 reject_low 1 ALIGNMENT 99 YS2-18d17.q1k chr01 1099 891 182754 182953 C 209 86.60 1301 reject_low 2 ALIGNMENT 49 YS2-18d17.p1k chr08 1021 866 389355 389510 C 156 80.13 1443 reject_low 46 ALIGNMENT 101 YS2-18d17.q1k chr13 772 878 196068 196174 F 107 98.13 1301 reject_low 32 ALIGNMENT 148 YS2-18d17.p1k chr13 866 1084 189754 189977 F 219 92.69 1443 reject_low 26 ALIGNMENT 0 YS2-18d17.p1k chr03 62 775 168386 168385 F 714 0.00 1443 reject_low 5,43 ALIGNMENT 99 YS2-18d17.q1k chr09 1099 891 205357 205556 C 209 86.60 1301 reject_low 9 ALIGNMENT 0 YS2-18d17.p1k chr03 863 865 168473 169203 F 3 0.00 1443 reject_low 43 ALIGNMENT 0 YS2-18d17.p1k chr10 62 865 483551 483550 F 804 0.00 1443 reject_low 37 ALIGNMENT 73 YS2-18d17.p1k chr03 776 862 168386 168472 F 87 96.55 1443 reject_low 5,43 ALIGNMENT 0 YS2-18d17.p1k chr12 865 62 221005 221004 C 804 0.00 1443 reject_low 38 ALIGNMENT 148 YS2-18d17.p1k chr11 1084 866 457889 458112 C 219 92.69 1443 reject_low 24 ALIGNMENT 0 YS2-18d17.q1k chr03 890 62 169064 169063 C 829 0.00 1301 reject_low 5 ALIGNMENT 0 YS2-18d17.p1k chr16 865 62 850961 850960 C 804 0.00 1443 reject_low 39 ALIGNMENT 0 YS2-18d17.p1k chr03 865 62 124461 124460 C 804 0.00 1443 reject_low 30 ALIGNMENT 0 YS2-18d17.p1k chr08 843 774 389011 389010 C 70 0.00 1443 reject_bad_break 0 ALIGNMENT 125 YS2-18d17.p1k chr10 866 1084 483551 483780 F 219 89.50 1443 reject_low 37 ALIGNMENT 0 YS2-18d17.p1k chr16 865 62 856549 856548 C 804 0.00 1443 reject_low 40 ALIGNMENT 0 YS2-18d17.p1k chr13 62 865 184172 184171 F 804 0.00 1443 reject_low 25 ALIGNMENT 0 YS2-18d17.q1k chr05 62 890 249929 249928 F 829 0.00 1301 reject_low 12 ALIGNMENT 89 YS2-18d17.q1k chr15 874 772 301097 301198 C 103 96.12 1301 reject_low 41 ALIGNMENT 0 YS2-18d17.p1k chr03 62 865 151520 151519 F 804 0.00 1443 reject_low 27 ALIGNMENT 96 YS2-18d17.q1k chr07 1099 891 736128 736327 C 209 86.12 1301 reject_low 13 ALIGNMENT 0 YS2-18d17.p1k chr13 62 865 189754 189753 F 804 0.00 1443 reject_low 26 ALIGNMENT 125 YS2-18d17.p1k chr10 866 1084 472379 472608 F 219 89.50 1443 reject_low 36 ALIGNMENT 0 YS2-18d17.q1k chr15 771 62 464553 464552 C 710 0.00 1301 reject_low 35 ALIGNMENT 79 YS2-18d17.q1k chr08 891 1038 85384 85530 F 148 86.49 1301 reject_low 21 ALIGNMENT 145 YS2-18d17.p1k chr16 866 1084 560480 560703 F 219 92.24 1443 reject_low 28 ALIGNMENT 0 YS2-18d17.q1k chr01 890 62 182954 182953 C 829 0.00 1301 reject_low 2 ALIGNMENT 100 YS2-18d17.q1k chr16 1099 890 856682 856882 C 210 86.67 1301 reject_low 3 ALIGNMENT 99 YS2-18d17.q1k chr09 1099 891 210445 210644 C 209 86.60 1301 reject_low 10 ALIGNMENT 0 YS2-18d17.q1k chr16 889 62 856883 856882 C 828 0.00 1301 reject_low 3 ALIGNMENT 0 YS2-18d17.p1k chr08 865 62 543940 543939 C 804 0.00 1443 reject_low 23 ALIGNMENT 80 YS2-18d17.q1k chr03 991 891 168962 169063 C 101 94.06 1301 reject_low 5 ALIGNMENT 151 YS2-18d17.p1k chr07 866 1084 535217 535440 F 219 93.15 1443 reject_low 19 ALIGNMENT 103 YS2-18d17.q1k chr06 874 772 101370 101472 C 103 100.00 1301 reject_low 34 ALIGNMENT 151 YS2-18d17.p1k chr11 1084 850 517201 517440 C 235 91.91 1443 reject_low 15 ALIGNMENT 151 YS2-18d17.p1k chr02 866 1084 259578 259801 F 219 93.15 1443 reject_low 18 ALIGNMENT 102 YS2-18d17.q1k chr12 874 767 92547 92654 C 108 98.15 1301 reject_low 31 ALIGNMENT 122 YS2-18d17.p1k chr16 1084 866 850731 850960 C 219 89.04 1443 reject_low 39 ALIGNMENT 143 YS2-18d17.p1k chr08 773 604 389010 389179 C 170 97.06 1443|0,3 reject_bad_break 0 ALIGNMENT 96 YS2-18d17.q1k chr15 878 772 464447 464552 C 107 97.20 1301 reject_low 35 ALIGNMENT 0 YS2-18d17.q1k chr08 62 890 85384 85383 F 829 0.00 1301 reject_low 21 ALIGNMENT 0 YS2-18d17.q1k chr14 755 62 547213 547212 C 694 0.00 1301 reject_low 4 ALIGNMENT 0 YS2-18d17.p1k chr08 606 607 389177 389514 C 0 0.00 1443 reject_bad_break 0 ALIGNMENT 102 YS2-18d17.q1k chr01 874 759 139154 139268 C 116 96.55 1301 reject_low 22 ALIGNMENT 151 YS2-18d17.p1k chr15 866 1084 594823 595046 F 219 93.15 1443 reject_low 20 ALIGNMENT 99 YS2-18d17.q1k chr07 1099 891 707339 707538 C 209 86.60 1301 reject_low 7 ALIGNMENT 133 YS2-18d17.p1k chr03 1084 866 142852 143075 C 219 90.41 1443 reject_low 33 ALIGNMENT 79 YS2-18d17.q1k chr15 876 772 980676 980782 C 105 92.38 1301 reject_low 42 ALIGNMENT 0 YS2-18d17.p1k chr08 865 62 389511 389510 C 804 0.00 1443 reject_low 46 ALIGNMENT 99 YS2-18d17.q1k chr07 1099 891 712350 712549 C 209 86.60 1301 reject_low 8 ALIGNMENT 49 YS2-18d17.p1k chr03 1021 866 168771 168926 C 156 80.13 1443 reject_low 45 ALIGNMENT 122 YS2-18d17.p1k chr12 1084 866 220775 221004 C 219 89.04 1443 reject_low 38 ALIGNMENT 195 YS2-18d17.q1k chr14 1099 756 546879 547212 C 344 88.08 1301 reject_low 4 ALIGNMENT 139 YS2-18d17.p1k chr03 1084 866 124237 124460 C 219 91.32 1443 reject_low 30 ALIGNMENT 0 YS2-18d17.p1k chr03 865 62 143076 143075 C 804 0.00 1443 reject_low 33 ALIGNMENT 0 YS2-18d17.q1k chr15 890 62 854613 854612 C 829 0.00 1301 reject_low 6 ALIGNMENT 0 YS2-18d17.p1k chr16 62 783 856551 856550 F 722 0.00 1443 reject_low 3 ALIGNMENT 142 YS2-18d17.p1k chr06 1084 866 161904 162127 C 219 91.78 1443 reject_low 29 ALIGNMENT 0 YS2-18d17.q1k chr15 771 62 980783 980782 C 710 0.00 1301 reject_low 42 ALIGNMENT 0 YS2-18d17.q1k chr05 62 890 492434 492433 F 829 0.00 1301 reject_low 1 ALIGNMENT 0 YS2-18d17.q1k chr04 62 890 945949 945948 F 829 0.00 1301 reject_low 11 ALIGNMENT 802 YS2-18d17.q1k chr08 34 891 388158 389015 F 858 98.60 1301 reject_bad_break 0 ALIGNMENT 148 YS2-18d17.p1k chr08 1084 866 543716 543939 C 219 92.69 1443 reject_low 23 ALIGNMENT 0 YS2-18d17.p1k chr16 62 865 560480 560479 F 804 0.00 1443 reject_low 28 ALIGNMENT 96 YS2-18d17.q1k chr14 1099 891 726376 726575 C 209 86.12 1301 reject_low 14 ALIGNMENT 96 YS2-18d17.q1k chr05 891 1099 249929 250128 F 209 86.12 1301 reject_low 12 ALIGNMENT 99 YS2-18d17.q1k chr05 891 1099 492434 492633 F 209 86.60 1301 reject_low 1 ALIGNMENT 0 YS2-18d17.p1k chr07 62 865 535217 535216 F 804 0.00 1443 reject_low 19 ALIGNMENT 0 YS2-18d17.q1k chr09 890 62 210645 210644 C 829 0.00 1301 reject_low 10 ALIGNMENT 0 YS2-18d17.q1k chr07 890 62 736328 736327 C 829 0.00 1301 reject_low 13 ALIGNMENT 0 YS2-18d17.p1k chr15 62 865 594823 594822 F 804 0.00 1443 reject_low 20 ALIGNMENT 0 YS2-18d17.q1k chr07 890 62 707539 707538 C 829 0.00 1301 reject_low 7 ALIGNMENT 96 YS2-18d17.q1k chr04 891 1099 945949 946148 F 209 86.12 1301 reject_low 11 ALIGNMENT 0 YS2-18d17.q1k chr15 771 62 301199 301198 C 710 0.00 1301 reject_low 41 ALIGNMENT 148 YS2-18d17.p1k chr13 866 1084 184172 184395 F 219 92.69 1443 reject_low 25 ALIGNMENT 0 YS2-18d17.p1k chr06 865 62 162128 162127 C 804 0.00 1443 reject_low 29 ALIGNMENT 0 YS2-18d17.q1k chr14 755 62 568234 568233 C 694 0.00 1301 reject_low 16 ALIGNMENT 0 YS2-18d17.p1k chr03 865 62 168927 168926 C 804 0.00 1443 reject_low 45 ALIGNMENT 0 YS2-18d17.p1k chr10 62 865 472379 472378 F 804 0.00 1443 reject_low 36 ALIGNMENT 122 YS2-18d17.p1k chr16 1084 866 856319 856548 C 219 89.04 1443 reject_low 40 ALIGNMENT 0 YS2-18d17.p1k chr11 849 62 517441 517440 C 788 0.00 1443 reject_low 15 ALIGNMENT 0 YS2-18d17.p1k chr01 62 773 182614 182613 F 712 0.00 1443 reject_low 2,44 ALIGNMENT 151 YS2-18d17.p1k chr02 866 1084 226626 226849 F 219 93.15 1443 reject_low 17 ALIGNMENT 122 YS2-18d17.p1k chr03 866 1084 169204 169433 F 219 89.04 1443 reject_low 43 ALIGNMENT 988 YS2-18d18.q1k chr16 1232 39 816041 817240 C 1194 95.81 1278 accept 0 ALIGNMENT 915 YS2-18d18.p1k chr16 32 1069 811443 812494 F 1038 97.40 1410 accept 0 ALIGNMENT 0 YS2-18d18.p1k chr07 62 487 732378 732377 F 426 0.00 1410 reject_low 1 ALIGNMENT 94 YS2-18d18.p1k chr07 488 978 732378 732873 F 491 74.13 1410 reject_low 1 ALIGNMENT 959 YS2-18d19.q1k chr11 1244 40 236922 238116 C 1205 94.44 1246 accept 0 ALIGNMENT 890 YS2-18d19.p1k chr11 40 1167 236324 237465 F 1128 94.15 1467 accept 0 ALIGNMENT 38 YS2-18d20.q1k vc_7 174 211 13525 13562 F 38 100.00 211 reject_low 3 ALIGNMENT 41 YS2-18d20.q1k vc_1 211 171 2472 2512 C 41 100.00 211 reject_low 1 ALIGNMENT 0 YS2-18d20.q1k chrm 211 171 23922 23921 C 41 0.00 211 accept 0 ALIGNMENT 0 YS2-18d20.q1k vc_1 170 62 2513 2512 C 109 0.00 211 reject_low 1 ALIGNMENT 0 YS2-18d20.q1k vc_4 62 170 5831 5830 F 109 0.00 211 reject_low 2 ALIGNMENT 0 YS2-18d20.q1k vc_7 62 173 13525 13524 F 112 0.00 211 reject_low 3 ALIGNMENT 117 YS2-18d20.q1k chrm 170 32 23921 24059 C 139 100.00 211 accept 0 ALIGNMENT 41 YS2-18d20.q1k vc_4 171 211 5831 5871 F 41 100.00 211 reject_low 2 ALIGNMENT 975 YS2-18d21.p1k chr08 40 1115 190235 191324 F 1076 97.49 1396 accept 0 ALIGNMENT 958 YS2-18d21.q1k chr08 1165 35 194533 195681 C 1131 96.20 1214 accept 0 ALIGNMENT 1044 YS2-18d22.q1k chr15 1236 35 166336 167533 C 1202 97.17 1236 accept 0 ALIGNMENT 1069 YS2-18d22.p1k chr15 31 1209 164144 165327 F 1179 97.54 1459 accept 0 ALIGNMENT 851 YS2-18d23.p1k chr11 33 1099 363059 364145 F 1067 94.75 1359 accept 0 ALIGNMENT 976 YS2-18d23.q1k chr11 1184 36 367253 368416 C 1149 95.91 1184 accept 0 ALIGNMENT 51 YS2-18d24.p1k chr13 223 286 184104 184167 F 64 93.75 1390|0,1 accept_trans 0 ALIGNMENT 0 YS2-18d24.p1k chr13 202 222 184101 184103 F 21 0.00 1390 accept_trans 0 ALIGNMENT 745 YS2-18d24.p1k chr13 284 1178 190084 190982 F 895 95.98 1390|2,0 accept_trans 0 ALIGNMENT 984 YS2-18d24.q1k chr13 1180 31 193876 195026 C 1150 96.35 1186 accept_trans 0 ALIGNMENT 87 YS2-18d24.p1k chr13 81 201 183981 184100 F 121 92.56 1390 accept_trans 0 ALIGNMENT 0 YS2-18d24.p1k chr13 286 285 184167 190085 F 0 0.00 1390 accept_trans 0 ALIGNMENT 0 YS2-18e01.q1k vc_2 915 62 2146 2145 C 854 0.00 1222 reject_low 14 ALIGNMENT 41 YS2-18e01.q1k vc_2 956 916 2105 2145 C 41 100.00 1222 reject_low 14 ALIGNMENT 85 YS2-18e01.q1k vc_4 956 1104 6353 6509 F 149 87.92 1222|1,0 reject_low 11 ALIGNMENT 41 YS2-18e01.q1k vc_3 956 916 2472 2512 C 41 100.00 1222 reject_low 15 ALIGNMENT 41 YS2-18e01.q1k vc_4 916 956 5831 5871 F 41 100.00 1222 reject_low 11 ALIGNMENT 0 YS2-18e01.q1k vc_7 62 918 13525 13524 F 857 0.00 1222 reject_low 17 ALIGNMENT 0 YS2-18e01.q1k vc_5 917 62 5064 5063 C 856 0.00 1222 reject_low 16 ALIGNMENT 0 YS2-18e01.q1k vc_5 62 955 2398 2397 F 894 0.00 1222 reject_low 8 ALIGNMENT 0 YS2-18e01.q1k vc_7 955 62 2728 2727 C 894 0.00 1222 reject_low 9 ALIGNMENT 95 YS2-18e01.q1k vc_5 956 1121 2398 2572 F 166 87.95 1222 reject_low 8 ALIGNMENT 95 YS2-18e01.q1k vc_2 956 1121 2164 2338 F 166 87.95 1222 reject_low 5 ALIGNMENT 38 YS2-18e01.q1k vc_7 919 956 13525 13562 F 38 100.00 1222 reject_low 17 ALIGNMENT 0 YS2-18e01.q1k vc_4 62 955 126 125 F 894 0.00 1222 reject_low 10 ALIGNMENT 85 YS2-18e01.q1k vc_4 956 1104 126 282 F 149 87.92 1222 reject_low 10 ALIGNMENT 0 YS2-18e01.p1k vc_7 197 937 13564 13563 F 741 0.00 1393 reject_low 3 ALIGNMENT 41 YS2-18e01.q1k vc_1 956 916 2472 2512 C 41 100.00 1222 reject_low 13 ALIGNMENT 0 YS2-18e01.q1k vc_5 917 62 37 36 C 856 0.00 1222 reject_low 18 ALIGNMENT 0 YS2-18e01.q1k vc_3 915 62 2513 2512 C 854 0.00 1222 reject_low 15 ALIGNMENT 0 YS2-18e01.q1k vc_1 62 955 2531 2530 F 894 0.00 1222 reject_low 4 ALIGNMENT 0 YS2-18e01.q1k vc_4 62 915 5831 5830 F 854 0.00 1222 reject_low 11 ALIGNMENT 95 YS2-18e01.q1k vc_3 956 1121 2531 2705 F 166 87.95 1222 reject_low 6 ALIGNMENT 0 YS2-18e01.q1k vc_4 957 956 5872 6353 F 0 0.00 1222 reject_low 11 ALIGNMENT 67 YS2-18e01.q1k vc_4 1035 956 1452 1534 C 80 96.25 1222 reject_low 12 ALIGNMENT 36 YS2-18e01.q1k vc_5 953 918 1 36 C 36 100.00 1222 reject_low 18 ALIGNMENT 826 YS2-18e01.q1k chr13 31 915 515083 515969 F 885 98.76 1222 accept_chi 0 ALIGNMENT 0 YS2-18e01.q1k vc_4 955 62 1535 1534 C 894 0.00 1222 reject_low 12 ALIGNMENT 708 YS2-18e01.p1k chr13 918 174 515083 515828 C 745 99.33 1393 accept_chi 1 ALIGNMENT 39 YS2-18e01.q1k vc_5 956 918 5025 5063 C 39 100.00 1222 reject_low 16 ALIGNMENT 0 YS2-18e01.q1k vc_2 62 955 2164 2163 F 894 0.00 1222 reject_low 5 ALIGNMENT 84 YS2-18e01.p1k vc_4 938 1140 5873 6089 F 203 82.76 1393 reject_low 2 ALIGNMENT 95 YS2-18e01.q1k vc_1 956 1121 2531 2705 F 166 87.95 1222 reject_low 4 ALIGNMENT 84 YS2-18e01.p1k vc_7 938 1140 13564 13780 F 203 82.76 1393 reject_low 3 ALIGNMENT 0 YS2-18e01.q1k vc_4 955 62 5813 5812 C 894 0.00 1222 reject_low 7 ALIGNMENT 0 YS2-18e01.q1k vc_3 62 955 2531 2530 F 894 0.00 1222 reject_low 6 ALIGNMENT 0 YS2-18e01.p1k vc_4 197 937 5873 5872 F 741 0.00 1393 reject_low 2 ALIGNMENT 0 YS2-18e01.q1k vc_1 915 62 2513 2512 C 854 0.00 1222 reject_low 13 ALIGNMENT 95 YS2-18e01.q1k vc_4 1121 956 5638 5812 C 166 87.35 1222 reject_low 7 ALIGNMENT 95 YS2-18e01.q1k vc_7 1121 956 2553 2727 C 166 87.35 1222 reject_low 9 ALIGNMENT 998 YS2-18e02.q1k chr05 38 1170 344122 345269 F 1133 97.09 1234 accept 0 ALIGNMENT 915 YS2-18e02.p1k chr05 1111 46 345085 346169 C 1066 97.19 1416 accept 0 ALIGNMENT 933 YS2-18e03.p1k chr12 1115 29 1025107 1026207 C 1087 96.23 1361 accept 0 ALIGNMENT 949 YS2-18e03.q1k chr12 33 1144 1023019 1024142 F 1112 95.59 1257 accept 0 ALIGNMENT 36 YS2-18e04.q1k vc_5 244 209 1 36 C 36 100.00 247 reject_low 7 ALIGNMENT 0 YS2-18e04.q1k vc_2 206 62 2146 2145 C 145 0.00 247 reject_low 2 ALIGNMENT 38 YS2-18e04.q1k vc_7 210 247 13525 13562 F 38 100.00 247 reject_low 6 ALIGNMENT 41 YS2-18e04.q1k vc_3 247 207 2472 2512 C 41 100.00 247 reject_low 3 ALIGNMENT 0 YS2-18e04.q1k vc_5 208 62 37 36 C 147 0.00 247 reject_low 7 ALIGNMENT 0 YS2-18e04.q1k chr15 247 208 797373 797372 C 40 0.00 247 accept 0 ALIGNMENT 39 YS2-18e04.q1k vc_5 247 209 5025 5063 C 39 100.00 247 reject_low 5 ALIGNMENT 41 YS2-18e04.q1k vc_2 247 207 2105 2145 C 41 100.00 247 reject_low 2 ALIGNMENT 41 YS2-18e04.q1k vc_1 247 207 2472 2512 C 41 100.00 247 reject_low 1 ALIGNMENT 0 YS2-18e04.q1k vc_3 206 62 2513 2512 C 145 0.00 247 reject_low 3 ALIGNMENT 0 YS2-18e04.q1k vc_4 62 206 5831 5830 F 145 0.00 247 reject_low 4 ALIGNMENT 150 YS2-18e04.q1k chr15 207 37 797372 797542 C 171 98.83 247 accept 0 ALIGNMENT 0 YS2-18e04.q1k vc_5 208 62 5064 5063 C 147 0.00 247 reject_low 5 ALIGNMENT 41 YS2-18e04.q1k vc_4 207 247 5831 5871 F 41 100.00 247 reject_low 4 ALIGNMENT 0 YS2-18e04.q1k vc_7 62 209 13525 13524 F 148 0.00 247 reject_low 6 ALIGNMENT 0 YS2-18e04.q1k vc_1 206 62 2513 2512 C 145 0.00 247 reject_low 1 ALIGNMENT 1054 YS2-18e05.q1k chr05 50 1270 160436 161664 F 1221 95.99 1273 accept 0 ALIGNMENT 951 YS2-18e05.p1k chr05 1085 39 163492 164545 C 1047 98.09 1447 accept 0 ALIGNMENT 915 YS2-18e06.p1k chr01 1100 32 222983 224066 C 1069 95.70 1463 ambiguous_tel 1 ALIGNMENT 903 YS2-18e06.p1k chr08 1086 32 549642 550712 C 1055 95.64 1463 ambiguous_tel 2 ALIGNMENT 1031 YS2-18e06.q1k chr07 1281 44 591123 592365 C 1238 95.88 1301 accept 0 ALIGNMENT 1011 YS2-18e08.q1k chr12 30 1308 743752 745020 F 1279 94.61 1424 accept 0 ALIGNMENT 898 YS2-18e08.p1k chr12 1076 32 744951 746016 C 1045 97.03 1476 accept 0 ALIGNMENT 1048 YS2-18e09.p1k chr04 29 1195 916008 917185 F 1167 97.43 1448 accept_chi 0 ALIGNMENT 1016 YS2-18e09.q1k chr07 33 1285 115855 117119 F 1253 94.17 1330 accept_chi 1 ALIGNMENT 464 YS2-18e10.q1k chr06 19 832 250146 250942 F 814 87.47 1186 accept 0 ALIGNMENT 42 YS2-18e11.q1k vc_1 322 281 2472 2513 C 42 100.00 322 reject_low 2 ALIGNMENT 42 YS2-18e11.q1k vc_4 281 322 5830 5871 F 42 100.00 322 reject_low 5 ALIGNMENT 0 YS2-18e11.q1k vc_1 280 96 2514 2513 C 185 0.00 322 reject_low 2 ALIGNMENT 42 YS2-18e11.q1k vc_2 322 281 2105 2146 C 42 100.00 322 reject_low 3 ALIGNMENT 0 YS2-18e11.q1k vc_5 283 96 5064 5063 C 188 0.00 322 reject_low 6 ALIGNMENT 0 YS2-18e11.q1k vc_7 96 284 13525 13524 F 189 0.00 322 reject_low 7 ALIGNMENT 205 YS2-18e11.q1k chr02 283 47 372137 372374 C 237 97.05 322 accept_chi 1 ALIGNMENT 0 YS2-18e11.q1k chr02 322 284 372138 372137 C 39 0.00 322 accept_chi 1 ALIGNMENT 0 YS2-18e11.q1k vc_5 283 96 37 36 C 188 0.00 322 reject_low 8 ALIGNMENT 42 YS2-18e11.q1k vc_3 322 281 2472 2513 C 42 100.00 322 reject_low 4 ALIGNMENT 0 YS2-18e11.p1k chr02 266 290 372374 372373 F 25 0.00 290 accept_chi 0 ALIGNMENT 36 YS2-18e11.q1k vc_5 319 284 1 36 C 36 100.00 322 reject_low 8 ALIGNMENT 0 YS2-18e11.q1k vc_3 280 96 2514 2513 C 185 0.00 322 reject_low 4 ALIGNMENT 39 YS2-18e11.q1k vc_5 322 284 5025 5063 C 39 100.00 322 reject_low 6 ALIGNMENT 206 YS2-18e11.p1k chr02 27 265 372137 372374 F 239 97.07 290 accept_chi 0 ALIGNMENT 0 YS2-18e11.q1k vc_2 280 96 2147 2146 C 185 0.00 322 reject_low 3 ALIGNMENT 38 YS2-18e11.q1k vc_7 285 322 13525 13562 F 38 100.00 322 reject_low 7 ALIGNMENT 0 YS2-18e11.q1k vc_4 96 280 5830 5829 F 185 0.00 322 reject_low 5 ALIGNMENT 969 YS2-18e12.p1k chr05 1115 33 515283 516377 C 1083 97.60 1426 accept 0 ALIGNMENT 1020 YS2-18e12.q1k chr05 36 1212 512171 513366 F 1177 96.86 1221 accept 0 ALIGNMENT 138 YS2-18e12.p1k chr04 795 33 634283 635044 C 763 73.53 1426 reject_low 1 ALIGNMENT 0 YS2-18e12.p1k chr04 902 796 634284 634283 C 107 0.00 1426 reject_low 1 ALIGNMENT 879 YS2-18e14.p1k chr12 35 1085 705448 706529 F 1051 95.81 1380 accept 0 ALIGNMENT 995 YS2-18e14.q1k chr12 1227 37 710623 711818 C 1191 95.97 1302 accept 0 ALIGNMENT 974 YS2-18e15.q1k chr08 1200 43 355558 356732 C 1158 96.03 1240 accept 0 ALIGNMENT 1020 YS2-18e15.p1k chr08 28 1221 353045 354254 F 1194 96.31 1409 accept 0 ALIGNMENT 299 YS2-18e17.p1k vc_6 1 439 3712 4157 F 439 91.12 692 reject_vc 6 ALIGNMENT 304 YS2-18e17.p1k vc_2 474 1 1263 1749 C 474 89.66 692 reject_vc 1 ALIGNMENT 304 YS2-18e17.p1k vc_5 474 1 4183 4669 C 474 89.66 692 reject_vc 3 ALIGNMENT 304 YS2-18e17.p1k vc_1 474 1 1263 1749 C 474 89.66 692 reject_vc 0 ALIGNMENT 298 YS2-18e17.p1k vc_7 1 474 456 942 F 474 89.66 692 reject_vc 4 ALIGNMENT 298 YS2-18e17.p1k vc_7 1 474 13918 14404 F 474 89.66 692 reject_vc 5 ALIGNMENT 304 YS2-18e17.p1k vc_3 474 1 1263 1749 C 474 89.66 692 reject_vc 2 ALIGNMENT 35 YS2-18e18.q1k chr07 287 382 817292 817385 F 96 81.25 722 reject_low 49 ALIGNMENT 0 YS2-18e18.p1k chr07 724 465 817293 817292 C 260 0.00 724 reject_low 48 ALIGNMENT 0 YS2-18e18.p1k chr13 122 345 362588 362587 F 224 0.00 724 reject_low 16 ALIGNMENT 212 YS2-18e18.q1k chr14 405 78 96612 96941 C 328 89.94 722 reject_low 14 ALIGNMENT 0 YS2-18e18.p1k chr16 674 724 850962 850961 F 51 0.00 724 reject_low 30 ALIGNMENT 195 YS2-18e18.p1k chr09 673 346 324829 325160 C 328 88.41 724 reject_low 20 ALIGNMENT 46 YS2-18e18.p1k chr04 673 525 1352634 1352783 C 149 79.19 724 reject_low 46 ALIGNMENT 0 YS2-18e18.p1k chr04 363 122 1096080 1096079 C 242 0.00 724 reject_low 38 ALIGNMENT 46 YS2-18e18.q1k chr04 78 226 1352634 1352783 F 149 79.19 722 reject_low 47 ALIGNMENT 25 YS2-18e18.p1k chr07 289 343 875955 876009 F 55 85.45 724 reject_low 44 ALIGNMENT 0 YS2-18e18.q1k chr12 722 388 215102 215101 C 335 0.00 722 reject_low 37 ALIGNMENT 0 YS2-18e18.q1k chr07 77 62 817730 817729 C 16 0.00 722 reject_low 24 ALIGNMENT 0 YS2-18e18.p1k chr09 345 122 325161 325160 C 224 0.00 724 reject_low 20 ALIGNMENT 0 YS2-18e18.q1k chr07 407 62 876010 876009 C 346 0.00 722 reject_low 45 ALIGNMENT 0 YS2-18e18.q1k chr10 62 77 483549 483548 F 16 0.00 722 reject_low 34 ALIGNMENT 0 YS2-18e18.q1k chr04 410 62 1352634 1352633 C 349 0.00 722 reject_low 3 ALIGNMENT 141 YS2-18e18.p1k chr11 673 353 162836 163165 C 321 83.80 724 reject_low 43 ALIGNMENT 177 YS2-18e18.p1k chr04 673 364 1095762 1096079 C 310 87.74 724 reject_low 38 ALIGNMENT 189 YS2-18e18.q1k chr16 405 78 850627 850962 C 328 87.80 722 reject_low 27 ALIGNMENT 0 YS2-18e18.p1k chr15 724 676 117701 117700 C 49 0.00 724 reject_low 33 ALIGNMENT 192 YS2-18e18.q1k chr02 78 395 221040 221361 F 318 88.68 722 reject_low 31 ALIGNMENT 0 YS2-18e18.q1k chr08 77 62 549638 549637 C 16 0.00 722 reject_low 6 ALIGNMENT 0 YS2-18e18.p1k chr08 122 363 543630 543629 F 242 0.00 724 reject_low 6 ALIGNMENT 200 YS2-18e18.q1k chr13 78 387 184170 184481 F 310 90.00 722 reject_low 22 ALIGNMENT 180 YS2-18e18.q1k chr15 76 387 117700 118019 F 312 87.82 722 reject_low 32 ALIGNMENT 0 YS2-18e18.p1k chr07 674 724 817729 817728 F 51 0.00 724 reject_low 25 ALIGNMENT 0 YS2-18e18.q1k chr07 62 76 114942 114941 F 15 0.00 722 reject_low 10 ALIGNMENT 148 YS2-18e18.q1k chr01 405 78 160241 160575 C 328 83.54 722 reject_low 41 ALIGNMENT 197 YS2-18e18.q1k chr08 387 78 549326 549637 C 310 89.68 722 reject_low 6 ALIGNMENT 0 YS2-18e18.q1k chr10 398 722 483876 483875 F 325 0.00 722 reject_low 34 ALIGNMENT 0 YS2-18e18.q1k chr06 77 62 162130 162129 C 16 0.00 722 reject_low 28 ALIGNMENT 0 YS2-18e18.q1k chr07 402 722 535540 535539 F 321 0.00 722 reject_low 17 ALIGNMENT 0 YS2-18e18.p1k chr11 724 237 202645 202644 C 488 0.00 724 reject_low 7 ALIGNMENT 193 YS2-18e18.q1k chr06 395 78 161810 162129 C 318 88.68 722 reject_low 28 ALIGNMENT 0 YS2-18e18.q1k chr11 722 406 517098 517097 C 317 0.00 722 reject_low 12 ALIGNMENT 0 YS2-18e18.p1k chr04 724 674 1352635 1352634 C 51 0.00 724 reject_low 46 ALIGNMENT 0 YS2-18e18.p1k chr12 674 724 215418 215417 F 51 0.00 724 reject_low 39 ALIGNMENT 203 YS2-18e18.p1k chr13 346 673 362588 362917 F 328 89.02 724 reject_low 16 ALIGNMENT 0 YS2-18e18.p1k chr06 674 724 162129 162128 F 51 0.00 724 reject_low 29 ALIGNMENT 0 YS2-18e18.p1k chr09 724 674 324830 324829 C 51 0.00 724 reject_low 20 ALIGNMENT 0 YS2-18e18.q1k chr11 62 77 162836 162835 F 16 0.00 722 reject_low 42 ALIGNMENT 0 YS2-18e18.p1k chr15 363 122 118020 118019 C 242 0.00 724 reject_low 33 ALIGNMENT 206 YS2-18e18.p1k chr11 346 676 517097 517429 F 331 89.12 724 reject_low 13 ALIGNMENT 0 YS2-18e18.q1k chr11 62 514 202644 202643 F 453 0.00 722 reject_low 8 ALIGNMENT 197 YS2-18e18.p1k chr07 364 673 817418 817729 F 310 89.68 724 reject_low 25 ALIGNMENT 206 YS2-18e18.q1k chr11 405 75 517097 517429 C 331 89.12 722 reject_low 12 ALIGNMENT 177 YS2-18e18.p1k chr12 364 673 215101 215418 F 310 87.74 724 reject_low 39 ALIGNMENT 0 YS2-18e18.q1k chr04 62 77 1095762 1095761 F 16 0.00 722 reject_low 36 ALIGNMENT 0 YS2-18e18.p1k chr11 724 674 162837 162836 C 51 0.00 724 reject_low 43 ALIGNMENT 0 YS2-18e18.q1k chr02 62 77 221040 221039 F 16 0.00 722 reject_low 31 ALIGNMENT 202 YS2-18e18.q1k chr07 78 401 535215 535540 F 324 89.20 722 reject_low 17 ALIGNMENT 486 YS2-18e18.q1k chr09 721 134 300094 300682 C 588 95.75 722 accept_chi 0 ALIGNMENT 0 YS2-18e18.q1k chr07 62 286 817292 817291 F 225 0.00 722 reject_low 49 ALIGNMENT 148 YS2-18e18.p1k chr01 346 673 160241 160575 F 328 83.54 724 reject_low 9 ALIGNMENT 0 YS2-18e18.q1k chr13 388 722 184481 184480 F 335 0.00 722 reject_low 22 ALIGNMENT 0 YS2-18e18.q1k chr04 388 722 1096079 1096078 F 335 0.00 722 reject_low 36 ALIGNMENT 0 YS2-18e18.q1k chr12 77 62 215419 215418 C 16 0.00 722 reject_low 37 ALIGNMENT 189 YS2-18e18.p1k chr16 346 673 850627 850962 F 328 87.80 724 reject_low 30 ALIGNMENT 0 YS2-18e18.p1k chr08 122 363 549326 549325 F 242 0.00 724 reject_low 26 ALIGNMENT 25 YS2-18e18.q1k chr07 462 408 875955 876009 C 55 85.45 722 reject_low 45 ALIGNMENT 184 YS2-18e18.p1k chr10 673 354 483549 483876 C 320 87.81 724 reject_low 35 ALIGNMENT 0 YS2-18e18.p1k chr07 724 674 535216 535215 C 51 0.00 724 reject_low 18 ALIGNMENT 0 YS2-18e18.q1k chr02 396 722 221361 221360 F 327 0.00 722 reject_low 31 ALIGNMENT 195 YS2-18e18.q1k chr09 78 405 324829 325160 F 328 88.41 722 reject_low 19 ALIGNMENT 212 YS2-18e18.p1k chr14 346 673 96612 96941 F 328 89.94 724 reject_low 15 ALIGNMENT 0 YS2-18e18.p1k chr12 122 363 215101 215100 F 242 0.00 724 reject_low 39 ALIGNMENT 0 YS2-18e18.q1k chr04 62 77 1352634 1352633 F 16 0.00 722 reject_low 47 ALIGNMENT 0 YS2-18e18.q1k chr07 383 722 817385 817384 F 340 0.00 722 reject_low 49 ALIGNMENT 0 YS2-18e18.q1k chr07 722 463 875956 875955 C 260 0.00 722 reject_low 45 ALIGNMENT 0 YS2-18e18.q1k chr01 722 406 160242 160241 C 317 0.00 722 reject_low 41 ALIGNMENT 177 YS2-18e18.q1k chr12 387 78 215101 215418 C 310 87.74 722 reject_low 37 ALIGNMENT 177 YS2-18e18.q1k chr04 78 387 1095762 1096079 F 310 87.74 722 reject_low 36 ALIGNMENT 0 YS2-18e18.p1k chr10 353 122 483877 483876 C 232 0.00 724 reject_low 35 ALIGNMENT 0 YS2-18e18.p1k chr04 724 674 1095763 1095762 C 51 0.00 724 reject_low 38 ALIGNMENT 0 YS2-18e18.q1k chr07 406 722 115271 115270 F 317 0.00 722 reject_low 10 ALIGNMENT 0 YS2-18e18.p1k chr01 122 345 160241 160240 F 224 0.00 724 reject_low 9 ALIGNMENT 470 YS2-18e18.p1k chr09 31 617 300094 300682 F 587 95.06 724 accept_chi 1 ALIGNMENT 200 YS2-18e18.p1k chr13 673 364 184170 184481 C 310 90.00 724 reject_low 23 ALIGNMENT 0 YS2-18e18.p1k chr07 724 626 876008 876007 C 99 0.00 724 reject_low 5 ALIGNMENT 0 YS2-18e18.p1k chr07 349 122 535541 535540 C 228 0.00 724 reject_low 18 ALIGNMENT 0 YS2-18e18.q1k chr01 722 406 165830 165829 C 317 0.00 722 reject_low 9 ALIGNMENT 0 YS2-18e18.q1k chr15 388 722 118019 118018 F 335 0.00 722 reject_low 32 ALIGNMENT 0 YS2-18e18.p1k chr04 341 724 1352633 1352632 F 384 0.00 724 reject_low 2 ALIGNMENT 193 YS2-18e18.p1k chr06 356 673 161810 162129 F 318 88.68 724 reject_low 29 ALIGNMENT 184 YS2-18e18.q1k chr10 78 397 483549 483876 F 320 87.81 722 reject_low 34 ALIGNMENT 0 YS2-18e18.q1k chr07 62 77 535215 535214 F 16 0.00 722 reject_low 17 ALIGNMENT 0 YS2-18e18.q1k chr16 722 406 850628 850627 C 317 0.00 722 reject_low 27 ALIGNMENT 0 YS2-18e18.p1k chr04 524 122 1352784 1352783 C 403 0.00 724 reject_low 46 ALIGNMENT 180 YS2-18e18.p1k chr15 675 364 117700 118019 C 312 87.82 724 reject_low 33 ALIGNMENT 152 YS2-18e18.q1k chr04 596 411 1352448 1352633 C 186 94.62 722 reject_low 3 ALIGNMENT 149 YS2-18e18.p1k chr01 346 674 165829 166164 F 329 83.59 724 reject_low 40 ALIGNMENT 0 YS2-18e18.p1k chr01 674 724 160575 160574 F 51 0.00 724 reject_low 9 ALIGNMENT 159 YS2-18e18.q1k chr07 126 596 876007 876479 F 471 80.89 722 reject_low 4 ALIGNMENT 0 YS2-18e18.q1k chr04 722 597 1352449 1352448 C 126 0.00 722 reject_low 3 ALIGNMENT 202 YS2-18e18.p1k chr07 673 350 535215 535540 C 324 89.20 724 reject_low 18 ALIGNMENT 0 YS2-18e18.q1k chr13 62 77 184170 184169 F 16 0.00 722 reject_low 22 ALIGNMENT 0 YS2-18e18.p1k chr01 675 724 166164 166163 F 50 0.00 724 reject_low 40 ALIGNMENT 80 YS2-18e18.p1k chr11 236 154 202644 202726 C 83 98.80 724 reject_low 7 ALIGNMENT 244 YS2-18e18.p1k chr07 674 346 114942 115271 C 329 93.01 724 reject_low 11 ALIGNMENT 0 YS2-18e18.q1k chr09 406 722 325160 325159 F 317 0.00 722 reject_low 19 ALIGNMENT 0 YS2-18e18.p1k chr13 724 674 184171 184170 C 51 0.00 724 reject_low 23 ALIGNMENT 0 YS2-18e18.p1k chr01 122 345 165829 165828 F 224 0.00 724 reject_low 40 ALIGNMENT 0 YS2-18e18.q1k chr01 76 62 166165 166164 C 15 0.00 722 reject_low 9 ALIGNMENT 0 YS2-18e18.q1k chr07 597 722 876479 876478 F 126 0.00 722 reject_low 4 ALIGNMENT 0 YS2-18e18.p1k chr14 122 345 96612 96611 F 224 0.00 724 reject_low 15 ALIGNMENT 197 YS2-18e18.q1k chr07 387 78 817418 817729 C 310 89.68 722 reject_low 24 ALIGNMENT 0 YS2-18e18.q1k chr01 77 62 160576 160575 C 16 0.00 722 reject_low 41 ALIGNMENT 0 YS2-18e18.q1k chr16 77 62 850963 850962 C 16 0.00 722 reject_low 27 ALIGNMENT 0 YS2-18e18.p1k chr06 122 355 161810 161809 F 234 0.00 724 reject_low 29 ALIGNMENT 0 YS2-18e18.p1k chr11 153 122 202727 202726 C 32 0.00 724 reject_low 7 ALIGNMENT 0 YS2-18e18.p1k chr04 122 154 1352448 1352447 F 33 0.00 724 reject_low 2 ALIGNMENT 0 YS2-18e18.q1k chr04 227 722 1352783 1352782 F 496 0.00 722 reject_low 47 ALIGNMENT 0 YS2-18e18.q1k chr07 722 388 817419 817418 C 335 0.00 722 reject_low 24 ALIGNMENT 0 YS2-18e18.q1k chr08 77 62 543942 543941 C 16 0.00 722 reject_low 21 ALIGNMENT 0 YS2-18e18.q1k chr14 77 62 96942 96941 C 16 0.00 722 reject_low 14 ALIGNMENT 149 YS2-18e18.q1k chr01 405 77 165829 166164 C 329 83.59 722 reject_low 9 ALIGNMENT 0 YS2-18e18.p1k chr08 674 724 543941 543940 F 51 0.00 724 reject_low 6 ALIGNMENT 0 YS2-18e18.p1k chr07 344 724 876009 876008 F 381 0.00 724 reject_low 44 ALIGNMENT 0 YS2-18e18.p1k chr07 122 288 875955 875954 F 167 0.00 724 reject_low 44 ALIGNMENT 0 YS2-18e18.p1k chr11 122 345 517097 517096 F 224 0.00 724 reject_low 13 ALIGNMENT 141 YS2-18e18.q1k chr11 78 398 162836 163165 F 321 83.80 722 reject_low 42 ALIGNMENT 200 YS2-18e18.p1k chr08 364 673 543630 543941 F 310 90.00 724 reject_low 6 ALIGNMENT 80 YS2-18e18.q1k chr11 515 597 202644 202726 F 83 98.80 722 reject_low 8 ALIGNMENT 0 YS2-18e18.q1k chr14 722 406 96613 96612 C 317 0.00 722 reject_low 14 ALIGNMENT 0 YS2-18e18.p1k chr13 363 122 184482 184481 C 242 0.00 724 reject_low 23 ALIGNMENT 0 YS2-18e18.p1k chr13 674 724 362917 362916 F 51 0.00 724 reject_low 16 ALIGNMENT 0 YS2-18e18.q1k chr11 399 722 163165 163164 F 324 0.00 722 reject_low 42 ALIGNMENT 200 YS2-18e18.q1k chr08 387 78 543630 543941 C 310 90.00 722 reject_low 21 ALIGNMENT 35 YS2-18e18.p1k chr07 464 369 817292 817385 C 96 81.25 724 reject_low 48 ALIGNMENT 0 YS2-18e18.p1k chr09 618 724 300682 300681 F 107 0.00 724 accept_chi 1 ALIGNMENT 0 YS2-18e18.p1k chr07 154 122 876480 876479 C 33 0.00 724 reject_low 5 ALIGNMENT 0 YS2-18e18.q1k chr07 62 125 876007 876006 F 64 0.00 722 reject_low 4 ALIGNMENT 0 YS2-18e18.p1k chr14 674 724 96941 96940 F 51 0.00 724 reject_low 15 ALIGNMENT 159 YS2-18e18.p1k chr07 625 155 876007 876479 C 471 80.89 724 reject_low 5 ALIGNMENT 0 YS2-18e18.p1k chr07 122 363 817418 817417 F 242 0.00 724 reject_low 25 ALIGNMENT 0 YS2-18e18.p1k chr07 724 675 114943 114942 C 50 0.00 724 reject_low 11 ALIGNMENT 197 YS2-18e18.p1k chr08 364 673 549326 549637 F 310 89.68 724 reject_low 26 ALIGNMENT 0 YS2-18e18.p1k chr10 724 674 483550 483549 C 51 0.00 724 reject_low 35 ALIGNMENT 0 YS2-18e18.q1k chr09 133 62 300683 300682 C 72 0.00 722 accept_chi 0 ALIGNMENT 0 YS2-18e18.p1k chr07 345 122 115272 115271 C 224 0.00 724 reject_low 11 ALIGNMENT 0 YS2-18e18.p1k chr08 674 724 549637 549636 F 51 0.00 724 reject_low 26 ALIGNMENT 0 YS2-18e18.q1k chr08 722 388 549327 549326 C 335 0.00 722 reject_low 6 ALIGNMENT 0 YS2-18e18.q1k chr11 598 722 202726 202725 F 125 0.00 722 reject_low 8 ALIGNMENT 0 YS2-18e18.p1k chr07 368 122 817386 817385 C 247 0.00 724 reject_low 48 ALIGNMENT 0 YS2-18e18.p1k chr11 677 724 517429 517428 F 48 0.00 724 reject_low 13 ALIGNMENT 244 YS2-18e18.q1k chr07 77 405 114942 115271 F 329 93.01 722 reject_low 10 ALIGNMENT 0 YS2-18e18.q1k chr06 722 396 161811 161810 C 327 0.00 722 reject_low 28 ALIGNMENT 0 YS2-18e18.p1k chr11 352 122 163166 163165 C 231 0.00 724 reject_low 43 ALIGNMENT 0 YS2-18e18.p1k chr16 122 345 850627 850626 F 224 0.00 724 reject_low 30 ALIGNMENT 0 YS2-18e18.q1k chr09 62 77 324829 324828 F 16 0.00 722 reject_low 19 ALIGNMENT 0 YS2-18e18.q1k chr08 722 388 543631 543630 C 335 0.00 722 reject_low 21 ALIGNMENT 152 YS2-18e18.p1k chr04 155 340 1352448 1352633 F 186 94.62 724 reject_low 2 ALIGNMENT 0 YS2-18e19.q1k vc_7 93 351 13525 13524 F 259 0.00 389 reject_low 6 ALIGNMENT 40 YS2-18e19.q1k vc_1 389 350 2472 2511 C 40 100.00 389 reject_low 2 ALIGNMENT 40 YS2-18e19.q1k vc_3 389 350 2472 2511 C 40 100.00 389 reject_low 3 ALIGNMENT 38 YS2-18e19.q1k vc_7 352 389 13525 13562 F 38 100.00 389 reject_low 6 ALIGNMENT 36 YS2-18e19.q1k vc_5 386 351 1 36 C 36 100.00 389 reject_low 7 ALIGNMENT 40 YS2-18e19.q1k vc_4 350 389 5832 5871 F 40 100.00 389 reject_low 4 ALIGNMENT 0 YS2-18e19.q1k vc_1 349 93 2512 2511 C 257 0.00 389 reject_low 2 ALIGNMENT 278 YS2-18e19.q1k chr10 349 39 241116 241428 C 311 97.43 389 accept_chi 1 ALIGNMENT 0 YS2-18e19.q1k vc_4 93 349 5832 5831 F 257 0.00 389 reject_low 4 ALIGNMENT 0 YS2-18e19.q1k vc_5 350 93 37 36 C 258 0.00 389 reject_low 7 ALIGNMENT 292 YS2-18e19.p1k chr10 28 342 241116 241431 F 315 98.41 360 accept_chi 0 ALIGNMENT 0 YS2-18e19.p1k chr10 343 360 241431 241430 F 18 0.00 360 accept_chi 0 ALIGNMENT 0 YS2-18e19.q1k vc_5 350 93 5064 5063 C 258 0.00 389 reject_low 5 ALIGNMENT 0 YS2-18e19.q1k chr10 389 350 241117 241116 C 40 0.00 389 accept_chi 1 ALIGNMENT 0 YS2-18e19.q1k vc_3 349 93 2512 2511 C 257 0.00 389 reject_low 3 ALIGNMENT 39 YS2-18e19.q1k vc_5 389 351 5025 5063 C 39 100.00 389 reject_low 5 ALIGNMENT 0 YS2-18e20.q1k vc_3 340 62 2512 2511 C 279 0.00 380 reject_low 3 ALIGNMENT 0 YS2-18e20.p1k chr10 346 363 241431 241430 F 18 0.00 363 accept_chi 1 ALIGNMENT 0 YS2-18e20.q1k vc_5 341 62 5064 5063 C 280 0.00 380 reject_low 5 ALIGNMENT 0 YS2-18e20.q1k vc_4 62 340 5832 5831 F 279 0.00 380 reject_low 4 ALIGNMENT 40 YS2-18e20.q1k vc_3 380 341 2472 2511 C 40 100.00 380 reject_low 3 ALIGNMENT 40 YS2-18e20.q1k vc_4 341 380 5832 5871 F 40 100.00 380 reject_low 4 ALIGNMENT 0 YS2-18e20.q1k chr10 380 341 241117 241116 C 40 0.00 380 accept_chi 0 ALIGNMENT 0 YS2-18e20.q1k vc_5 341 62 37 36 C 280 0.00 380 reject_low 7 ALIGNMENT 39 YS2-18e20.q1k vc_5 380 342 5025 5063 C 39 100.00 380 reject_low 5 ALIGNMENT 0 YS2-18e20.q1k vc_1 340 62 2512 2511 C 279 0.00 380 reject_low 2 ALIGNMENT 252 YS2-18e20.p1k chr10 32 345 241116 241431 F 314 94.27 363 accept_chi 1 ALIGNMENT 0 YS2-18e20.q1k vc_7 62 342 13525 13524 F 281 0.00 380 reject_low 6 ALIGNMENT 40 YS2-18e20.q1k vc_1 380 341 2472 2511 C 40 100.00 380 reject_low 2 ALIGNMENT 305 YS2-18e20.q1k chr10 340 25 241116 241431 C 316 99.68 380 accept_chi 0 ALIGNMENT 36 YS2-18e20.q1k vc_5 377 342 1 36 C 36 100.00 380 reject_low 7 ALIGNMENT 38 YS2-18e20.q1k vc_7 343 380 13525 13562 F 38 100.00 380 reject_low 6 ALIGNMENT 1003 YS2-18e21.q1k chr07 1200 42 1056604 1057757 C 1159 96.98 1216 accept 0 ALIGNMENT 978 YS2-18e21.p1k chr07 31 1180 1053789 1054952 F 1150 96.26 1352 accept 0 ALIGNMENT 1000 YS2-18e22.p1k chr02 33 1174 61241 62397 F 1142 97.29 1411 accept 0 ALIGNMENT 1024 YS2-18e22.q1k chr02 1226 39 64105 65296 C 1188 95.88 1228 accept 0 ALIGNMENT 167 YS2-18e23.p1k chr04 212 30 1395149 1395331 C 183 98.36 231 accept_chi 0 ALIGNMENT 41 YS2-18e23.q1k vc_3 274 234 2472 2512 C 41 100.00 274 reject_low 4 ALIGNMENT 0 YS2-18e23.q1k vc_7 62 236 13525 13524 F 175 0.00 274 reject_low 7 ALIGNMENT 0 YS2-18e23.q1k vc_2 233 62 2146 2145 C 172 0.00 274 reject_low 3 ALIGNMENT 0 YS2-18e23.q1k vc_5 235 56 37 2375 C 180 0.00 274 reject_low 8 ALIGNMENT 36 YS2-18e23.q1k vc_5 271 236 1 36 C 36 100.00 274 reject_low 8 ALIGNMENT 41 YS2-18e23.q1k vc_1 274 234 2472 2512 C 41 100.00 274 reject_low 2 ALIGNMENT 0 YS2-18e23.q1k chr04 235 274 1395331 1395330 F 40 0.00 274 accept_chi 1 ALIGNMENT 167 YS2-18e23.q1k chr04 52 234 1395149 1395331 F 183 98.36 274 accept_chi 1 ALIGNMENT 0 YS2-18e23.q1k vc_1 233 62 2513 2512 C 172 0.00 274 reject_low 2 ALIGNMENT 38 YS2-18e23.q1k vc_7 237 274 13525 13562 F 38 100.00 274 reject_low 7 ALIGNMENT 0 YS2-18e23.q1k vc_3 233 62 2513 2512 C 172 0.00 274 reject_low 4 ALIGNMENT 41 YS2-18e23.q1k vc_2 274 234 2105 2145 C 41 100.00 274 reject_low 3 ALIGNMENT 0 YS2-18e23.p1k chr04 231 213 1395150 1395149 C 19 0.00 231 accept_chi 0 ALIGNMENT 0 YS2-18e23.q1k vc_4 62 233 5831 5830 F 172 0.00 274 reject_low 5 ALIGNMENT 39 YS2-18e23.q1k vc_5 274 236 5025 5063 C 39 100.00 274 reject_low 6 ALIGNMENT 0 YS2-18e23.q1k vc_5 235 62 5064 5063 C 174 0.00 274 reject_low 6 ALIGNMENT 20 YS2-18e23.q1k vc_5 55 33 2376 2398 C 23 95.65 274 reject_low 8 ALIGNMENT 41 YS2-18e23.q1k vc_4 234 274 5831 5871 F 41 100.00 274 reject_low 5 ALIGNMENT 329 YS2-18e24.p1k chr02 180 546 254995 255361 F 367 98.91 565 accept_chi 1 ALIGNMENT 465 YS2-18e24.q1k chr02 546 35 254850 255361 C 512 99.41 547 accept_chi 0 ALIGNMENT 0 YS2-18e24.p1k chr02 547 565 255361 255360 F 19 0.00 565 accept_chi 1 ALIGNMENT 974 YS2-18f02.q1k chr04 39 1149 1241256 1242393 F 1111 96.85 1235 accept 0 ALIGNMENT 973 YS2-18f02.p1k chr04 1145 29 1241509 1242618 C 1117 96.60 1581 accept 0 ALIGNMENT 989 YS2-18f03.q1k chr10 1180 32 42802 43959 C 1149 96.61 1323 accept 0 ALIGNMENT 934 YS2-18f03.p1k chr10 30 1069 38593 39646 F 1040 97.98 1418 accept 0 ALIGNMENT 177 YS2-18f04.p1k chr07 196 740 445552 446086 F 545 80.18 1448 accept 0 ALIGNMENT 754 YS2-18f05.p1k chr09 32 1006 243755 244719 F 975 94.67 1387 accept 0 ALIGNMENT 0 YS2-18f05.q1k chr03 830 62 228040 228039 C 769 0.00 1267 reject_low 5 ALIGNMENT 86 YS2-18f05.q1k chr05 821 919 288430 288527 F 99 94.95 1267 reject_low 1 ALIGNMENT 0 YS2-18f05.p1k chr14 225 62 777583 777582 C 164 0.00 1387 reject_low 4 ALIGNMENT 30 YS2-18f05.q1k chr03 914 882 227937 227969 C 33 96.97 1267 reject_low 5 ALIGNMENT 0 YS2-18f05.p1k chr14 874 255 777555 777554 C 620 0.00 1387 reject_low 4 ALIGNMENT 79 YS2-18f05.q1k chr16 914 824 689562 689654 C 91 95.60 1267 reject_low 2 ALIGNMENT 0 YS2-18f05.p1k chr13 62 230 239354 239353 F 169 0.00 1387 reject_low 3 ALIGNMENT 913 YS2-18f05.q1k chr09 1116 40 248624 249717 C 1077 96.10 1267 accept 0 ALIGNMENT 0 YS2-18f05.q1k chr16 823 62 689655 689654 C 762 0.00 1267 reject_low 2 ALIGNMENT 41 YS2-18f05.q1k chr03 877 831 227993 228039 C 47 97.87 1267 reject_low 5 ALIGNMENT 0 YS2-18f05.q1k chr05 62 820 288430 288429 F 759 0.00 1267 reject_low 1 ALIGNMENT 0 YS2-18f05.q1k chr03 881 878 227970 227992 C 4 0.00 1267 reject_low 5 ALIGNMENT 0 YS2-18f05.p1k chr13 265 874 239387 239386 F 610 0.00 1387 reject_low 3 ALIGNMENT 20 YS2-18f05.p1k chr13 231 264 239354 239387 F 34 100.00 1387 reject_low 3 ALIGNMENT 20 YS2-18f05.p1k chr14 254 226 777554 777582 C 29 100.00 1387 reject_low 4 ALIGNMENT 944 YS2-18f06.p1k chr16 27 1110 659898 660997 F 1084 97.23 1451 accept 0 ALIGNMENT 1029 YS2-18f06.q1k chr16 1244 32 662575 663794 C 1213 95.71 1307 accept 0 ALIGNMENT 0 YS2-18f07.q1k chr08 875 123 365366 365365 C 753 0.00 1379 reject_low 1 ALIGNMENT 0 YS2-18f07.q1k chr11 875 120 576127 576126 C 756 0.00 1379 reject_low 2 ALIGNMENT 0 YS2-18f07.q1k chr15 875 120 427986 427985 C 756 0.00 1379 reject_low 6 ALIGNMENT 961 YS2-18f07.p1k chr15 29 1072 423755 424813 F 1044 98.28 1424 accept 0 ALIGNMENT 36 YS2-18f07.q1k chr07 37 77 394460 394500 F 41 97.56 1379 reject_low 7 ALIGNMENT 0 YS2-18f07.q1k chr08 875 125 252862 252861 C 751 0.00 1379 reject_low 9 ALIGNMENT 24 YS2-18f07.q1k chr07 129 40 529970 530058 C 90 80.00 1379 reject_low 4 ALIGNMENT 24 YS2-18f07.q1k chr13 37 65 354188 354216 F 29 96.55 1379 reject_low 11 ALIGNMENT 24 YS2-18f07.q1k chr05 64 36 308999 309027 C 29 96.55 1379 reject_low 10 ALIGNMENT 0 YS2-18f07.q1k chr06 875 90 224541 224540 C 786 0.00 1379 reject_low 12 ALIGNMENT 36 YS2-18f07.q1k chr08 77 37 365368 365408 C 41 97.56 1379 reject_low 8 ALIGNMENT 0 YS2-18f07.q1k chr04 93 875 604293 604292 F 783 0.00 1379 reject_low 5 ALIGNMENT 0 YS2-18f07.q1k chr07 78 875 394500 394499 F 798 0.00 1379 reject_low 7 ALIGNMENT 40 YS2-18f07.q1k chr07 36 86 70174 70224 F 51 94.12 1379 reject_low 3 ALIGNMENT 0 YS2-18f07.q1k chr07 875 130 529971 529970 C 746 0.00 1379 reject_low 4 ALIGNMENT 34 YS2-18f07.q1k chr04 36 92 604237 604293 F 57 87.72 1379 reject_low 5 ALIGNMENT 46 YS2-18f07.q1k chr08 122 37 365365 365450 C 86 87.21 1379 reject_low 1 ALIGNMENT 23 YS2-18f07.q1k chr06 89 46 224540 224583 C 44 86.36 1379 reject_low 12 ALIGNMENT 0 YS2-18f07.q1k chr13 66 875 354216 354215 F 810 0.00 1379 reject_low 11 ALIGNMENT 28 YS2-18f07.q1k chr15 119 49 427985 428055 C 71 83.10 1379 reject_low 6 ALIGNMENT 981 YS2-18f07.q1k chr15 1198 36 426787 427963 C 1163 95.53 1379 accept 0 ALIGNMENT 25 YS2-18f07.q1k chr08 124 36 252861 252946 C 89 80.90 1379 reject_low 9 ALIGNMENT 0 YS2-18f07.q1k chr05 875 65 309000 308999 C 811 0.00 1379 reject_low 10 ALIGNMENT 0 YS2-18f07.q1k chr08 875 78 365369 365368 C 798 0.00 1379 reject_low 8 ALIGNMENT 0 YS2-18f07.q1k chr07 87 875 70224 70223 F 789 0.00 1379 reject_low 3 ALIGNMENT 40 YS2-18f07.q1k chr11 119 46 576126 576199 C 74 87.84 1379 reject_low 2 ALIGNMENT 746 YS2-18f08.p1k chr14 1103 40 543162 544227 C 1064 90.88 1470 accept 0 ALIGNMENT 682 YS2-18f08.q1k chr14 49 1038 538717 539701 F 990 90.81 1336 accept 0 ALIGNMENT 453 YS2-18f09.p1k chr15 523 36 986093 986579 C 488 98.16 543 accept 0 ALIGNMENT 0 YS2-18f09.p1k chr15 543 524 986094 986093 C 20 0.00 543 accept 0 ALIGNMENT 980 YS2-18f11.p1k chr12 1109 29 466462 467556 C 1081 97.69 1462 accept 1 ALIGNMENT 1053 YS2-18f11.q1k chr12 30 1222 462973 464171 F 1193 96.90 1229 accept 1 ALIGNMENT 1053 YS2-18f11.q1k chr12 30 1222 453836 455034 F 1193 96.90 1229 accept 0 ALIGNMENT 980 YS2-18f11.p1k chr12 1109 29 457325 458419 C 1081 97.69 1462 accept 0 ALIGNMENT 124 YS2-18f12.p1k chr03 100 448 275454 275802 F 349 79.37 1448 reject_low 1 ALIGNMENT 964 YS2-18f12.p1k chr14 32 1117 710026 711126 F 1086 97.51 1448 accept 0 ALIGNMENT 0 YS2-18f12.p1k chr03 449 842 275802 275801 F 394 0.00 1448 reject_low 1 ALIGNMENT 0 YS2-18f12.p1k chr03 62 99 275454 275453 F 38 0.00 1448 reject_low 1 ALIGNMENT 1033 YS2-18f12.q1k chr14 1228 33 711580 712776 C 1196 96.24 1230 accept 0 ALIGNMENT 994 YS2-18f13.p1k chr15 30 1142 184066 185191 F 1113 97.57 1469 accept 0 ALIGNMENT 1024 YS2-18f13.q1k chr15 1209 30 189445 190624 C 1180 97.03 1322 accept 0 ALIGNMENT 927 YS2-18f14.p1k chr03 32 1060 173106 174144 F 1029 98.06 1427 accept 0 ALIGNMENT 973 YS2-18f14.q1k chr03 1100 30 177744 178822 C 1071 98.32 1251 accept 0 ALIGNMENT 0 YS2-18f15.q1k vc_4 305 307 1615 1878 F 3 0.00 958 reject_low 2 ALIGNMENT 247 YS2-18f15.q1k vc_7 303 53 4922 5172 C 251 99.60 958|0,1 reject_low 7 ALIGNMENT 0 YS2-18f15.q1k vc_7 304 304 4700 4921 C 1 0.00 958 reject_low 7 ALIGNMENT 0 YS2-18f15.q1k vc_3 304 477 2991 2990 F 174 0.00 958 reject_low 6 ALIGNMENT 0 YS2-18f15.q1k vc_4 237 62 113 112 C 176 0.00 958 reject_low 8 ALIGNMENT 671 YS2-18f15.q1k vc_7 786 1 1773 2569 C 786 95.67 958 reject_low 1 ALIGNMENT 65 YS2-18f15.q1k vc_4 238 304 1548 1614 F 67 100.00 958 reject_low 2 ALIGNMENT 0 YS2-18f15.q1k vc_4 237 62 6340 6339 C 176 0.00 958 reject_low 9 ALIGNMENT 364 YS2-18f15.q1k vc_4 308 886 1879 2473 F 579 88.77 958 reject_low 2 ALIGNMENT 0 YS2-18f15.q1k vc_7 477 422 4584 4583 C 56 0.00 958 reject_low 7 ALIGNMENT 0 YS2-18f15.q1k vc_1 304 477 2991 2990 F 174 0.00 958 reject_low 4 ALIGNMENT 51 YS2-18f15.q1k vc_7 54 3 6360 6411 C 52 100.00 958|1,0 reject_low 7 ALIGNMENT 302 YS2-18f15.q1k vc_3 1 303 2689 2991 F 303 100.00 958 reject_low 6 ALIGNMENT 115 YS2-18f15.q1k vc_7 421 305 4583 4699 C 117 100.00 958 reject_low 7 ALIGNMENT 65 YS2-18f15.q1k vc_4 304 238 6273 6339 C 67 100.00 958 reject_low 9 ALIGNMENT 413 YS2-18f15.q1k vc_4 421 1 5232 5654 C 421 99.52 958 reject_low 3 ALIGNMENT 302 YS2-18f15.q1k vc_2 1 303 2322 2624 F 303 100.00 958 reject_low 5 ALIGNMENT 0 YS2-18f15.q1k vc_4 477 422 5233 5232 C 56 0.00 958 reject_low 3 ALIGNMENT 0 YS2-18f15.q1k vc_2 304 477 2624 2623 F 174 0.00 958 reject_low 5 ALIGNMENT 0 YS2-18f15.q1k vc_4 477 305 6274 6273 C 173 0.00 958 reject_low 9 ALIGNMENT 0 YS2-18f15.q1k vc_4 477 305 47 46 C 173 0.00 958 reject_low 8 ALIGNMENT 676 YS2-18f15.q1k vc_5 1 886 2556 3457 F 886 92.78 958 reject_vc 0 ALIGNMENT 0 YS2-18f15.q1k vc_4 62 237 1548 1547 F 176 0.00 958 reject_low 2 ALIGNMENT 302 YS2-18f15.q1k vc_1 1 303 2689 2991 F 303 100.00 958 reject_low 4 ALIGNMENT 65 YS2-18f15.q1k vc_4 304 238 46 112 C 67 100.00 958 reject_low 8 ALIGNMENT 0 YS2-18f15.q1k vc_7 53 54 5172 6360 C 0 0.00 958 reject_low 7 ALIGNMENT 1026 YS2-18f16.p1k chr13 31 1187 745171 746340 F 1157 97.58 1476 accept 0 ALIGNMENT 1042 YS2-18f16.q1k chr13 1272 37 748127 749378 C 1236 96.68 1299 accept 0 ALIGNMENT 113 YS2-18f17.p1k chr12 877 995 485696 485814 F 119 98.32 1435 reject_low 9 ALIGNMENT 0 YS2-18f17.q1k chr12 423 62 489482 489481 C 362 0.00 1263 reject_low 2 ALIGNMENT 0 YS2-18f17.q1k chr12 809 558 472465 472464 C 252 0.00 1263 reject_low 5 ALIGNMENT 87 YS2-18f17.q1k chr06 817 924 31622 31729 F 108 95.37 1263 reject_low 8 ALIGNMENT 0 YS2-18f17.q1k chr12 438 62 482163 482162 C 377 0.00 1263 reject_low 3 ALIGNMENT 20 YS2-18f17.p1k chr12 1030 1080 459839 459892 F 51 84.31 1435 reject_low 5 ALIGNMENT 94 YS2-18f17.p1k chr06 617 510 31622 31729 C 108 98.15 1435 reject_low 7 ALIGNMENT 904 YS2-18f17.p1k chr12 30 995 467965 468930 F 966 99.17 1435 reject_low 1 ALIGNMENT 113 YS2-18f17.p1k chr12 877 995 472464 472582 F 119 98.32 1435 reject_low 3,4 ALIGNMENT 128 YS2-18f17.q1k chr12 557 424 489348 489481 C 134 98.51 1263 reject_low 2 ALIGNMENT 0 YS2-18f17.p1k chr06 879 618 31623 31622 C 262 0.00 1435 reject_low 7 ALIGNMENT 0 YS2-18f17.p1k chr12 62 876 482044 482043 F 815 0.00 1435 reject_low 2 ALIGNMENT 0 YS2-18f17.p1k chr12 62 876 489348 489347 F 815 0.00 1435 reject_low 6 ALIGNMENT 0 YS2-18f17.q1k chr12 438 62 472583 472582 C 377 0.00 1263 reject_low 5 ALIGNMENT 0 YS2-18f17.q1k chr12 809 558 485697 485696 C 252 0.00 1263 reject_low 4 ALIGNMENT 119 YS2-18f17.q1k chr12 557 439 482044 482162 C 119 100.00 1263 reject_low 3 ALIGNMENT 0 YS2-18f17.p1k chr06 509 62 31730 31729 C 448 0.00 1435 reject_low 7 ALIGNMENT 0 YS2-18f17.p1k chr12 62 876 472464 472463 F 815 0.00 1435 reject_low 3,4 ALIGNMENT 118 YS2-18f17.p1k chr12 877 1010 489348 489481 F 134 95.52 1435 reject_low 6 ALIGNMENT 113 YS2-18f17.p1k chr12 877 995 482044 482162 F 119 98.32 1435 reject_low 2 ALIGNMENT 0 YS2-18f17.q1k chr12 438 62 485815 485814 C 377 0.00 1263 reject_low 4 ALIGNMENT 894 YS2-18f17.q1k chr12 1191 42 459045 460202 C 1150 94.35 1263 accept 0 ALIGNMENT 0 YS2-18f17.q1k chr06 62 816 31622 31621 F 755 0.00 1263 reject_low 8 ALIGNMENT 119 YS2-18f17.q1k chr12 557 439 472464 472582 C 119 100.00 1263 reject_low 5 ALIGNMENT 0 YS2-18f17.q1k chr12 438 62 468931 468930 C 377 0.00 1263 reject_low 1 ALIGNMENT 0 YS2-18f17.p1k chr12 62 1029 459839 459838 F 968 0.00 1435 reject_low 5 ALIGNMENT 119 YS2-18f17.q1k chr12 557 439 485696 485814 C 119 100.00 1263 reject_low 4 ALIGNMENT 0 YS2-18f17.q1k chr12 809 558 482045 482044 C 252 0.00 1263 reject_low 3 ALIGNMENT 575 YS2-18f17.q1k chr12 1191 439 468182 468930 C 753 93.76 1263 reject_low 1 ALIGNMENT 923 YS2-18f17.p1k chr12 30 1021 458828 459819 F 992 98.99 1435 accept 0 ALIGNMENT 0 YS2-18f17.q1k chr12 809 558 489349 489348 C 252 0.00 1263 reject_low 2 ALIGNMENT 0 YS2-18f17.p1k chr12 62 876 485696 485695 F 815 0.00 1435 reject_low 9 ALIGNMENT 972 YS2-18f18.q1k chr11 36 1155 198245 199354 F 1120 96.88 1257 accept 0 ALIGNMENT 326 YS2-18f18.p1k chr13 30 1056 486965 487993 F 1027 77.99 1485 reject_low 1 ALIGNMENT 359 YS2-18f18.q1k chr13 1112 36 487441 488509 C 1077 79.29 1257 reject_low 1 ALIGNMENT 971 YS2-18f18.p1k chr11 1234 30 198584 199786 C 1205 94.69 1485 accept 0 ALIGNMENT 143 YS2-18f19.q1k chr03 38 201 303751 303913 F 164 96.34 230 ambiguous_tel 2 ALIGNMENT 0 YS2-18f19.q1k chr09 230 202 10614 10613 C 29 0.00 230 ambiguous_tel 0 ALIGNMENT 0 YS2-18f19.q1k vc_5 191 62 37 36 C 130 0.00 230 reject_low 9 ALIGNMENT 0 YS2-18f19.q1k vc_5 191 62 5064 5063 C 130 0.00 230 reject_low 7 ALIGNMENT 41 YS2-18f19.q1k vc_2 230 190 2105 2145 C 41 100.00 230 reject_low 4 ALIGNMENT 0 YS2-18f19.q1k vc_4 62 189 5831 5830 F 128 0.00 230 reject_low 6 ALIGNMENT 158 YS2-18f19.q1k chr10 201 38 10596 10758 C 164 99.39 230 ambiguous_tel 1 ALIGNMENT 39 YS2-18f19.q1k vc_5 230 192 5025 5063 C 39 100.00 230 reject_low 7 ALIGNMENT 0 YS2-18f19.q1k vc_1 189 62 2513 2512 C 128 0.00 230 reject_low 3 ALIGNMENT 0 YS2-18f19.q1k vc_2 189 62 2146 2145 C 128 0.00 230 reject_low 4 ALIGNMENT 36 YS2-18f19.q1k vc_5 227 192 1 36 C 36 100.00 230 reject_low 9 ALIGNMENT 38 YS2-18f19.q1k vc_7 193 230 13525 13562 F 38 100.00 230 reject_low 8 ALIGNMENT 0 YS2-18f19.q1k chr10 230 202 10597 10596 C 29 0.00 230 ambiguous_tel 1 ALIGNMENT 0 YS2-18f19.q1k chr03 202 230 303913 303912 F 29 0.00 230 ambiguous_tel 2 ALIGNMENT 0 YS2-18f19.q1k vc_3 189 62 2513 2512 C 128 0.00 230 reject_low 5 ALIGNMENT 0 YS2-18f19.q1k vc_7 62 192 13525 13524 F 131 0.00 230 reject_low 8 ALIGNMENT 41 YS2-18f19.q1k vc_3 230 190 2472 2512 C 41 100.00 230 reject_low 5 ALIGNMENT 41 YS2-18f19.q1k vc_4 190 230 5831 5871 F 41 100.00 230 reject_low 6 ALIGNMENT 41 YS2-18f19.q1k vc_1 230 190 2472 2512 C 41 100.00 230 reject_low 3 ALIGNMENT 158 YS2-18f19.q1k chr09 201 38 10613 10775 C 164 99.39 230 ambiguous_tel 0 ALIGNMENT 36 YS2-18f21.q1k vc_5 645 610 1 36 C 36 100.00 648 reject_low 8 ALIGNMENT 40 YS2-18f21.q1k vc_4 609 648 5832 5871 F 40 100.00 648 reject_low 5 ALIGNMENT 0 YS2-18f21.q1k vc_7 62 610 13525 13524 F 549 0.00 648 reject_low 7 ALIGNMENT 0 YS2-18f21.q1k vc_5 609 62 5064 5063 C 548 0.00 648 reject_low 6 ALIGNMENT 40 YS2-18f21.q1k vc_1 648 609 2472 2511 C 40 100.00 648 reject_low 2 ALIGNMENT 0 YS2-18f21.q1k vc_2 608 62 2145 2144 C 547 0.00 648 reject_low 3 ALIGNMENT 40 YS2-18f21.q1k vc_3 648 609 2472 2511 C 40 100.00 648 reject_low 4 ALIGNMENT 0 YS2-18f21.q1k chr15 648 609 147639 147638 C 40 0.00 648 accept_chi 0 ALIGNMENT 0 YS2-18f21.q1k vc_3 608 62 2512 2511 C 547 0.00 648 reject_low 4 ALIGNMENT 408 YS2-18f21.p1k chr15 157 619 147750 148211 F 463 97.19 637 accept_chi 1 ALIGNMENT 39 YS2-18f21.q1k vc_5 648 610 5025 5063 C 39 100.00 648 reject_low 6 ALIGNMENT 0 YS2-18f21.q1k vc_1 608 62 2512 2511 C 547 0.00 648 reject_low 2 ALIGNMENT 38 YS2-18f21.q1k vc_7 611 648 13525 13562 F 38 100.00 648 reject_low 7 ALIGNMENT 40 YS2-18f21.q1k vc_2 648 609 2105 2144 C 40 100.00 648 reject_low 3 ALIGNMENT 0 YS2-18f21.p1k chr15 620 637 148211 148210 F 18 0.00 637 accept_chi 1 ALIGNMENT 0 YS2-18f21.q1k vc_4 62 608 5832 5831 F 547 0.00 648 reject_low 5 ALIGNMENT 0 YS2-18f21.q1k vc_5 609 62 37 36 C 548 0.00 648 reject_low 8 ALIGNMENT 516 YS2-18f21.q1k chr15 608 35 147638 148211 C 574 97.74 648 accept_chi 0 ALIGNMENT 213 YS2-18f22.q1k vc_4 308 699 1879 2273 F 392 85.97 801 reject_low 11 ALIGNMENT 0 YS2-18f22.q1k vc_4 127 237 1548 1547 F 111 0.00 801 reject_low 11 ALIGNMENT 60 YS2-18f22.q1k vc_4 238 302 1548 1612 F 65 98.46 801 reject_low 11 ALIGNMENT 291 YS2-18f22.p1k vc_5 394 1 4267 4669 C 394 92.39 771 reject_vc 0 ALIGNMENT 285 YS2-18f22.p1k vc_7 1 394 456 858 F 394 91.88 771 reject_vc 1 ALIGNMENT 0 YS2-18f22.q1k vc_4 303 307 1613 1878 F 5 0.00 801 reject_low 11 ALIGNMENT 292 YS2-18f22.q1k vc_3 1 302 2689 2990 F 302 99.01 801 reject_low 10 ALIGNMENT 506 YS2-18f22.q1k vc_7 678 1 1889 2569 C 678 92.18 801 reject_vc 1 ALIGNMENT 238 YS2-18f22.q1k vc_7 302 53 4923 5172 C 250 98.40 801|0,1 reject_low 12 ALIGNMENT 291 YS2-18f22.p1k vc_2 394 1 1347 1749 C 394 92.39 771 reject_low 3 ALIGNMENT 102 YS2-18f22.q1k vc_7 413 305 4591 4699 C 109 98.17 801 reject_low 12 ALIGNMENT 0 YS2-18f22.q1k vc_7 304 303 4700 4922 C 2 0.00 801 reject_low 12 ALIGNMENT 0 YS2-18f22.q1k vc_4 237 127 6340 6339 C 111 0.00 801 reject_low 14 ALIGNMENT 291 YS2-18f22.p1k vc_1 394 1 1347 1749 C 394 92.39 771 reject_low 2 ALIGNMENT 285 YS2-18f22.p1k vc_7 1 394 13918 14320 F 394 91.88 771 reject_low 6 ALIGNMENT 60 YS2-18f22.q1k vc_4 302 238 48 112 C 65 98.46 801 reject_low 13 ALIGNMENT 0 YS2-18f22.q1k vc_4 237 127 113 112 C 111 0.00 801 reject_low 13 ALIGNMENT 51 YS2-18f22.q1k vc_7 54 3 6360 6411 C 52 100.00 801|1,0 reject_low 12 ALIGNMENT 387 YS2-18f22.q1k vc_4 413 1 5240 5654 C 413 98.06 801 reject_low 7 ALIGNMENT 292 YS2-18f22.q1k vc_2 1 302 2322 2623 F 302 99.01 801 reject_low 9 ALIGNMENT 60 YS2-18f22.q1k vc_4 302 238 6275 6339 C 65 98.46 801 reject_low 14 ALIGNMENT 0 YS2-18f22.q1k vc_7 53 54 5172 6360 C 0 0.00 801 reject_low 12 ALIGNMENT 291 YS2-18f22.p1k vc_3 394 1 1347 1749 C 394 92.39 771 reject_low 4 ALIGNMENT 292 YS2-18f22.q1k vc_1 1 302 2689 2990 F 302 99.01 801 reject_low 8 ALIGNMENT 291 YS2-18f22.p1k vc_6 1 394 3712 4114 F 394 92.39 771 reject_low 5 ALIGNMENT 509 YS2-18f22.q1k vc_5 1 699 2556 3257 F 699 91.56 801 reject_vc 0 ALIGNMENT 849 YS2-18f24.p1k chr07 132 1161 309935 310977 F 1030 96.02 1408 accept 0 ALIGNMENT 594 YS2-18f24.q1k chr07 748 31 311762 312477 C 718 95.54 1305 accept 0 ALIGNMENT 1011 YS2-18g04.p1k chr10 32 1178 686625 687784 F 1147 97.21 1474 accept 0 ALIGNMENT 1065 YS2-18g04.q1k chr10 1262 30 690280 691532 C 1233 96.03 1387 accept 0 ALIGNMENT 953 YS2-18g05.q1k chr02 34 1138 209025 210146 F 1105 96.11 1313 accept 0 ALIGNMENT 911 YS2-18g05.p1k chr02 1006 33 212825 213800 C 974 97.84 1498 accept 0 ALIGNMENT 0 YS2-18g05.p1k chr02 541 62 213239 213238 C 480 0.00 1498 reject_low 2 ALIGNMENT 178 YS2-18g05.p1k chr02 1255 903 212524 212883 C 353 84.70 1498 reject_low 1 ALIGNMENT 0 YS2-18g05.p1k chr02 592 62 213290 213289 C 531 0.00 1498 reject_low 1 ALIGNMENT 0 YS2-18g05.p1k chr02 947 624 212929 213156 C 324 0.00 1498 reject_low 2 ALIGNMENT 25 YS2-18g05.p1k chr02 1038 948 212837 212928 C 91 74.73 1498 reject_low 2 ALIGNMENT 46 YS2-18g05.p1k chr02 674 593 213208 213289 C 82 85.37 1498 reject_low 1 ALIGNMENT 0 YS2-18g05.p1k chr02 902 675 212884 213207 C 228 0.00 1498 reject_low 1 ALIGNMENT 45 YS2-18g05.p1k chr02 623 542 213157 213238 C 82 85.37 1498 reject_low 2 ALIGNMENT 0 YS2-18g06.q1k chr12 263 156 489349 489348 C 108 0.00 263 reject_low 5 ALIGNMENT 41 YS2-18g06.q1k vc_2 263 223 2105 2145 C 41 100.00 263 reject_low 7 ALIGNMENT 0 YS2-18g06.q1k vc_1 222 62 2513 2512 C 161 0.00 263 reject_low 6 ALIGNMENT 0 YS2-18g06.q1k vc_4 62 222 5831 5830 F 161 0.00 263 reject_low 9 ALIGNMENT 41 YS2-18g06.q1k vc_4 223 263 5831 5871 F 41 100.00 263 reject_low 9 ALIGNMENT 0 YS2-18g06.q1k chr12 263 224 459608 459607 C 40 0.00 263 manual 1 ALIGNMENT 39 YS2-18g06.q1k vc_5 263 225 5025 5063 C 39 100.00 263 reject_low 10 ALIGNMENT 0 YS2-18g06.q1k chr12 263 224 468745 468744 C 40 0.00 263 manual 0 ALIGNMENT 119 YS2-18g06.q1k chr12 155 37 489348 489466 C 119 100.00 263 reject_low 5 ALIGNMENT 41 YS2-18g06.q1k vc_3 263 223 2472 2512 C 41 100.00 263 reject_low 8 ALIGNMENT 0 YS2-18g06.q1k chr12 263 156 482045 482044 C 108 0.00 263 reject_low 3 ALIGNMENT 120 YS2-18g06.q1k chr12 155 36 472464 472583 C 120 100.00 263 reject_low 2 ALIGNMENT 186 YS2-18g06.q1k chr12 223 37 459607 459793 C 187 100.00 263 manual 1 ALIGNMENT 36 YS2-18g06.q1k vc_5 260 225 1 36 C 36 100.00 263 reject_low 12 ALIGNMENT 0 YS2-18g06.q1k chr12 263 156 472465 472464 C 108 0.00 263 reject_low 2 ALIGNMENT 120 YS2-18g06.q1k chr12 155 36 482044 482163 C 120 100.00 263 reject_low 3 ALIGNMENT 38 YS2-18g06.q1k vc_7 226 263 13525 13562 F 38 100.00 263 reject_low 11 ALIGNMENT 0 YS2-18g06.q1k vc_7 62 225 13525 13524 F 164 0.00 263 reject_low 11 ALIGNMENT 0 YS2-18g06.q1k vc_5 224 62 37 36 C 163 0.00 263 reject_low 12 ALIGNMENT 0 YS2-18g06.q1k vc_3 222 62 2513 2512 C 161 0.00 263 reject_low 8 ALIGNMENT 120 YS2-18g06.q1k chr12 155 36 485696 485815 C 120 100.00 263 reject_low 4 ALIGNMENT 41 YS2-18g06.q1k vc_1 263 223 2472 2512 C 41 100.00 263 reject_low 6 ALIGNMENT 0 YS2-18g06.q1k chr12 263 156 485697 485696 C 108 0.00 263 reject_low 4 ALIGNMENT 0 YS2-18g06.q1k vc_5 224 62 5064 5063 C 163 0.00 263 reject_low 10 ALIGNMENT 187 YS2-18g06.q1k chr12 223 36 468744 468931 C 188 100.00 263 manual 0 ALIGNMENT 0 YS2-18g06.q1k vc_2 222 62 2146 2145 C 161 0.00 263 reject_low 7 ALIGNMENT 570 YS2-18g08.p1k chr14 653 33 763445 764065 C 621 97.91 671 ambiguous_tel 1 ALIGNMENT 0 YS2-18g08.p1k chr14 671 654 763446 763445 C 18 0.00 671 ambiguous_tel 1 ALIGNMENT 583 YS2-18g08.q1k chr14 34 654 763445 764065 F 621 98.71 655 ambiguous_tel 0 ALIGNMENT 36 YS2-18g10.q1k vc_5 242 207 1 36 C 36 100.00 245 reject_low 7 ALIGNMENT 0 YS2-18g10.q1k vc_5 206 62 5064 5063 C 145 0.00 245 reject_low 5 ALIGNMENT 38 YS2-18g10.q1k vc_7 208 245 13525 13562 F 38 100.00 245 reject_low 6 ALIGNMENT 39 YS2-18g10.q1k vc_5 245 207 5025 5063 C 39 100.00 245 reject_low 5 ALIGNMENT 41 YS2-18g10.q1k vc_3 245 205 2472 2512 C 41 100.00 245 reject_low 3 ALIGNMENT 164 YS2-18g10.q1k chr11 31 206 267401 267576 F 176 99.43 245 accept_chi 0 ALIGNMENT 0 YS2-18g10.q1k vc_4 62 204 5831 5830 F 143 0.00 245 reject_low 4 ALIGNMENT 41 YS2-18g10.q1k vc_1 245 205 2472 2512 C 41 100.00 245 reject_low 2 ALIGNMENT 0 YS2-18g10.q1k vc_5 206 62 37 36 C 145 0.00 245 reject_low 7 ALIGNMENT 0 YS2-18g10.q1k vc_7 62 207 13525 13524 F 146 0.00 245 reject_low 6 ALIGNMENT 41 YS2-18g10.q1k vc_4 205 245 5831 5871 F 41 100.00 245 reject_low 4 ALIGNMENT 0 YS2-18g10.q1k vc_1 204 62 2513 2512 C 143 0.00 245 reject_low 2 ALIGNMENT 158 YS2-18g10.p1k chr11 204 29 267401 267576 C 176 98.30 211 accept_chi 1 ALIGNMENT 0 YS2-18g10.q1k vc_3 204 62 2513 2512 C 143 0.00 245 reject_low 3 ALIGNMENT 0 YS2-18g10.q1k chr11 207 245 267576 267575 F 39 0.00 245 accept_chi 0 ALIGNMENT 1019 YS2-18g11.q1k chr01 1234 40 119821 121024 C 1195 95.65 1248 accept 0 ALIGNMENT 956 YS2-18g11.p1k chr01 33 1134 116925 118034 F 1102 97.01 1409 accept 0 ALIGNMENT 917 YS2-18g12.p1k chr12 32 1112 1020332 1021428 F 1081 96.58 1403 accept 0 ALIGNMENT 903 YS2-18g12.q1k chr12 1085 43 1025062 1026111 C 1043 96.36 1258 accept 0 ALIGNMENT 0 YS2-18g12.q1k chr12 793 62 1025361 1025360 C 732 0.00 1258 reject_low 1 ALIGNMENT 234 YS2-18g12.q1k chr12 1187 794 1024951 1025360 C 394 88.58 1258 reject_low 1 ALIGNMENT 996 YS2-18g13.q1k chr08 39 1231 449903 451099 F 1193 95.47 1231 accept 0 ALIGNMENT 960 YS2-18g13.p1k chr08 1126 32 453930 455040 C 1095 97.08 1405 accept 0 ALIGNMENT 0 YS2-18g14.q1k vc_1 140 111 2473 2472 C 30 0.00 574 reject_vc 12 ALIGNMENT 38 YS2-18g14.q1k vc_7 73 110 13525 13562 F 38 100.00 574 reject_vc 17 ALIGNMENT 0 YS2-18g14.q1k vc_7 111 140 100 99 F 30 0.00 574 reject_vc 16 ALIGNMENT 39 YS2-18g14.q1k vc_5 110 72 5025 5063 C 39 100.00 574 reject_vc 15 ALIGNMENT 50 YS2-18g14.q1k vc_7 320 270 6361 6411 C 51 100.00 574 reject_vc 11 ALIGNMENT 0 YS2-18g14.q1k vc_5 62 109 2398 2397 F 48 0.00 574 reject_vc 4 ALIGNMENT 0 YS2-18g14.q1k vc_4 111 110 5872 6353 F 0 0.00 574 reject_vc 9 ALIGNMENT 256 YS2-18g14.q1k vc_4 559 110 5351 5812 C 450 86.67 574 reject_vc 6 ALIGNMENT 0 YS2-18g14.q1k chr01 70 140 181325 181324 F 71 0.00 574 accept_chi 7 ALIGNMENT 36 YS2-18g14.q1k vc_5 107 72 1 36 C 36 100.00 574 reject_vc 18 ALIGNMENT 0 YS2-18g14.q1k vc_7 269 62 6412 6411 C 208 0.00 574 reject_vc 11 ALIGNMENT 159 YS2-18g14.q1k vc_4 110 271 6353 6514 F 162 100.00 574|1,0 reject_vc 9 ALIGNMENT 0 YS2-18g14.q1k vc_7 111 140 13562 13561 F 30 0.00 574 reject_vc 17 ALIGNMENT 159 YS2-18g14.q1k vc_4 110 271 126 287 F 162 100.00 574 reject_vc 8 ALIGNMENT 41 YS2-18g14.q1k vc_4 70 110 5831 5871 F 41 100.00 574 reject_vc 9 ALIGNMENT 261 YS2-18g14.q1k vc_1 110 559 2531 2990 F 450 87.56 574 reject_vc 1 ALIGNMENT 0 YS2-18g14.q1k vc_4 109 62 5813 5812 C 48 0.00 574 reject_vc 6 ALIGNMENT 87 YS2-18g14.q1k vc_4 198 110 1446 1534 C 89 100.00 574 reject_vc 10 ALIGNMENT 63 YS2-18g14.q1k chr01 1 69 181258 181325 F 69 98.55 574 accept_chi 7 ALIGNMENT 261 YS2-18g14.q1k vc_5 110 559 2398 2857 F 450 87.56 574 reject_vc 4 ALIGNMENT 41 YS2-18g14.q1k vc_1 110 70 2472 2512 C 41 100.00 574 reject_vc 12 ALIGNMENT 0 YS2-18g14.q1k vc_5 140 111 5026 5025 C 30 0.00 574 reject_vc 15 ALIGNMENT 261 YS2-18g14.q1k vc_7 559 110 2268 2727 C 450 86.89 574 reject_vc 5 ALIGNMENT 0 YS2-18g14.p1k chr01 516 500 180632 180631 C 17 0.00 516 accept_chi 0 ALIGNMENT 0 YS2-18g14.q1k vc_5 140 108 2 1 C 33 0.00 574 reject_vc 18 ALIGNMENT 261 YS2-18g14.q1k vc_3 110 559 2531 2990 F 450 87.56 574 reject_vc 3 ALIGNMENT 51 YS2-18g14.q1k vc_7 559 323 4923 5169 C 237 75.53 574 reject_vc 11 ALIGNMENT 0 YS2-18g14.q1k vc_1 62 109 2531 2530 F 48 0.00 574 reject_vc 1 ALIGNMENT 0 YS2-18g14.q1k vc_3 140 111 2473 2472 C 30 0.00 574 reject_vc 14 ALIGNMENT 0 YS2-18g14.q1k vc_4 109 62 1535 1534 C 48 0.00 574 reject_vc 10 ALIGNMENT 0 YS2-18g14.q1k vc_7 109 62 2728 2727 C 48 0.00 574 reject_vc 5 ALIGNMENT 41 YS2-18g14.q1k vc_3 110 70 2472 2512 C 41 100.00 574 reject_vc 14 ALIGNMENT 41 YS2-18g14.q1k vc_2 110 70 2105 2145 C 41 100.00 574 reject_vc 13 ALIGNMENT 261 YS2-18g14.q1k vc_2 110 559 2164 2623 F 450 87.56 574 reject_vc 2 ALIGNMENT 0 YS2-18g14.q1k vc_2 62 109 2164 2163 F 48 0.00 574 reject_vc 2 ALIGNMENT 449 YS2-18g14.p1k chr01 499 1 180631 181124 C 499 98.00 516 accept_chi 0 ALIGNMENT 0 YS2-18g14.q1k vc_3 62 109 2531 2530 F 48 0.00 574 reject_vc 3 ALIGNMENT 0 YS2-18g14.q1k vc_7 322 321 5170 6360 C 2 0.00 574 reject_vc 11 ALIGNMENT 0 YS2-18g14.q1k vc_2 140 111 2106 2105 C 30 0.00 574 reject_vc 13 ALIGNMENT 38 YS2-18g14.q1k vc_7 73 110 63 100 F 38 100.00 574 reject_vc 16 ALIGNMENT 0 YS2-18g14.q1k vc_4 62 109 126 125 F 48 0.00 574 reject_vc 8 ALIGNMENT 909 YS2-18g16.p1k chr12 1035 33 457007 458025 C 1003 97.41 1378 accept 0 ALIGNMENT 0 YS2-18g16.q1k chr12 139 865 490543 490542 F 727 0.00 1406 reject_low 2 ALIGNMENT 909 YS2-18g16.p1k chr12 1035 33 466144 467162 C 1003 97.41 1378 accept 1 ALIGNMENT 96 YS2-18g16.q1k chr12 35 138 490440 490543 F 104 98.08 1406 reject_low 2 ALIGNMENT 1066 YS2-18g16.q1k chr12 35 1278 461609 462867 F 1244 95.26 1406 accept 1 ALIGNMENT 1066 YS2-18g16.q1k chr12 35 1278 452472 453730 F 1244 95.26 1406 accept 0 ALIGNMENT 968 YS2-18g17.p1k chr05 1172 34 424082 425240 C 1139 96.75 1405 accept 0 ALIGNMENT 955 YS2-18g17.q1k chr05 35 1165 419609 420742 F 1131 95.49 1224 accept 0 ALIGNMENT 973 YS2-18g18.p1k chr08 1127 29 324026 325142 C 1099 97.27 1469 accept 0 ALIGNMENT 1015 YS2-18g18.q1k chr08 35 1180 319288 320433 F 1146 97.21 1255 accept 0 ALIGNMENT 0 YS2-18g21.q1k vc_5 182 62 37 36 C 121 0.00 221 reject_low 6 ALIGNMENT 0 YS2-18g21.q1k vc_7 62 183 13525 13524 F 122 0.00 221 reject_low 5 ALIGNMENT 36 YS2-18g21.q1k vc_5 218 183 1 36 C 36 100.00 221 reject_low 6 ALIGNMENT 39 YS2-18g21.q1k vc_5 221 183 5025 5063 C 39 100.00 221 reject_low 4 ALIGNMENT 0 YS2-18g21.q1k vc_4 62 180 5831 5830 F 119 0.00 221 reject_low 3 ALIGNMENT 41 YS2-18g21.q1k vc_3 221 181 2472 2512 C 41 100.00 221 reject_low 2 ALIGNMENT 0 YS2-18g21.q1k vc_1 180 62 2513 2512 C 119 0.00 221 reject_low 1 ALIGNMENT 0 YS2-18g21.q1k vc_5 182 62 5064 5063 C 121 0.00 221 reject_low 4 ALIGNMENT 0 YS2-18g21.q1k vc_3 180 62 2513 2512 C 119 0.00 221 reject_low 2 ALIGNMENT 123 YS2-18g21.q1k chr07 48 180 645351 645483 F 133 98.50 221 accept 0 ALIGNMENT 41 YS2-18g21.q1k vc_4 181 221 5831 5871 F 41 100.00 221 reject_low 3 ALIGNMENT 41 YS2-18g21.q1k vc_1 221 181 2472 2512 C 41 100.00 221 reject_low 1 ALIGNMENT 0 YS2-18g21.q1k chr07 181 221 645483 645482 F 41 0.00 221 accept 0 ALIGNMENT 38 YS2-18g21.q1k vc_7 184 221 13525 13562 F 38 100.00 221 reject_low 5 ALIGNMENT 0 YS2-18g23.q1k vc_4 62 216 5831 5830 F 155 0.00 257 reject_low 5 ALIGNMENT 0 YS2-18g23.p1k chr02 223 205 143976 143975 C 19 0.00 223 accept_chi 0 ALIGNMENT 0 YS2-18g23.q1k vc_2 216 62 2146 2145 C 155 0.00 257 reject_low 3 ALIGNMENT 167 YS2-18g23.p1k chr02 204 31 143975 144148 C 174 99.43 223 accept_chi 0 ALIGNMENT 38 YS2-18g23.q1k vc_7 220 257 13525 13562 F 38 100.00 257 reject_low 7 ALIGNMENT 41 YS2-18g23.q1k vc_1 257 217 2472 2512 C 41 100.00 257 reject_low 2 ALIGNMENT 0 YS2-18g23.q1k vc_3 216 62 2513 2512 C 155 0.00 257 reject_low 4 ALIGNMENT 41 YS2-18g23.q1k vc_3 257 217 2472 2512 C 41 100.00 257 reject_low 4 ALIGNMENT 0 YS2-18g23.q1k vc_5 218 62 37 36 C 157 0.00 257 reject_low 8 ALIGNMENT 41 YS2-18g23.q1k vc_4 217 257 5831 5871 F 41 100.00 257 reject_low 5 ALIGNMENT 39 YS2-18g23.q1k vc_5 257 219 5025 5063 C 39 100.00 257 reject_low 6 ALIGNMENT 0 YS2-18g23.q1k vc_7 62 219 13525 13524 F 158 0.00 257 reject_low 7 ALIGNMENT 0 YS2-18g23.q1k vc_1 216 62 2513 2512 C 155 0.00 257 reject_low 2 ALIGNMENT 0 YS2-18g23.q1k chr02 218 257 144148 144147 F 40 0.00 257 accept_chi 1 ALIGNMENT 154 YS2-18g23.q1k chr02 46 217 143975 144148 F 172 97.67 257 accept_chi 1 ALIGNMENT 36 YS2-18g23.q1k vc_5 254 219 1 36 C 36 100.00 257 reject_low 8 ALIGNMENT 0 YS2-18g23.q1k vc_5 218 62 5064 5063 C 157 0.00 257 reject_low 6 ALIGNMENT 41 YS2-18g23.q1k vc_2 257 217 2105 2145 C 41 100.00 257 reject_low 3 ALIGNMENT 941 YS2-18g24.p1k chr11 1241 115 211222 212357 C 1127 96.10 1441 accept_chi 1 ALIGNMENT 1032 YS2-18g24.q1k chr07 1249 36 899651 900863 C 1214 96.62 1252 accept_chi 0 ALIGNMENT 0 YS2-18h02.p1k chrm 293 372 68673 68672 F 80 0.00 372 reject_low 12 ALIGNMENT 21 YS2-18h02.p1k chrm 238 215 55490 55513 C 24 95.83 372 reject_low 6 ALIGNMENT 0 YS2-18h02.p1k chrm 213 239 68626 68611 F 27 0.00 372 reject_low 12 ALIGNMENT 0 YS2-18h02.p1k chrm 62 190 50718 50717 F 129 0.00 372 reject_low 9,10 ALIGNMENT 21 YS2-18h02.p1k chrm 71 34 13761 13798 C 38 100.00 372 reject_bad_break 0 ALIGNMENT 0 YS2-18h02.p1k chrm 264 267 68636 68648 F 4 0.00 372 reject_low 12 ALIGNMENT 0 YS2-18h02.p1k chrm 62 224 84178 84177 F 163 0.00 372 reject_low 3 ALIGNMENT 70 YS2-18h02.p1k chrm 225 313 84178 84265 F 89 95.51 372 reject_low 3 ALIGNMENT 23 YS2-18h02.p1k chrm 240 263 68612 68635 F 24 100.00 372 reject_low 12 ALIGNMENT 24 YS2-18h02.p1k chrm 188 212 68601 68625 F 25 100.00 372 reject_low 12 ALIGNMENT 0 YS2-18h02.p1k chrm 333 372 56309 56308 F 40 0.00 372 reject_low 10 ALIGNMENT 0 YS2-18h02.p1k chrm 62 187 68601 68600 F 126 0.00 372 reject_low 12 ALIGNMENT 38 YS2-18h02.p1k chrm 225 321 2537 2639 F 97 83.51 372 reject_low 5 ALIGNMENT 0 YS2-18h02.p1k chrm 62 225 6127 6126 F 164 0.00 372 reject_low 7 ALIGNMENT 43 YS2-18h02.p1k chrm 236 191 53712 53757 C 46 100.00 372 reject_low 1 ALIGNMENT 0 YS2-18h02.p1k chrm 333 372 50824 50823 F 40 0.00 372 reject_low 9 ALIGNMENT 22 YS2-18h02.p1k chrm 321 278 55424 55463 C 44 90.91 372|0,4 reject_low 11 ALIGNMENT 0 YS2-18h02.p1k chrm 372 324 85583 85582 C 49 0.00 372 reject_low 2 ALIGNMENT 0 YS2-18h02.p1k chrm 285 372 6183 6182 F 88 0.00 372 reject_low 7 ALIGNMENT 45 YS2-18h02.p1k chrm 254 199 35111 35166 C 56 94.64 372 reject_low 4 ALIGNMENT 0 YS2-18h02.p1k chrm 372 239 55491 55490 C 134 0.00 372 reject_low 6 ALIGNMENT 57 YS2-18h02.p1k chrm 240 332 50726 50824 F 93 89.25 372 reject_low 9 ALIGNMENT 0 YS2-18h02.p1k chrm 372 237 53713 53712 C 136 0.00 372 reject_low 1 ALIGNMENT 0 YS2-18h02.p1k chrm 286 372 81566 81565 F 87 0.00 372 reject_low 8 ALIGNMENT 20 YS2-18h02.p1k chrm 191 212 50718 50739 F 22 100.00 372 reject_low 9,10 ALIGNMENT 0 YS2-18h02.p1k chrm 198 62 35167 35166 C 137 0.00 372 reject_low 4 ALIGNMENT 0 YS2-18h02.p1k chrm 77 72 13744 13760 C 6 0.00 372 reject_bad_break 0 ALIGNMENT 0 YS2-18h02.p1k chrm 239 62 55541 55540 C 178 0.00 372 reject_low 11 ALIGNMENT 0 YS2-18h02.p1k chrm 213 277 50740 56256 F 65 0.00 372 reject_low 10 ALIGNMENT 74 YS2-18h02.p1k chrm 193 78 13628 13743 C 116 98.28 372 reject_bad_break 0 ALIGNMENT 0 YS2-18h02.p1k chrm 224 62 85680 85679 C 163 0.00 372 reject_low 2 ALIGNMENT 0 YS2-18h02.p1k chrm 322 372 2639 2638 F 51 0.00 372 reject_low 5 ALIGNMENT 36 YS2-18h02.p1k chrm 226 284 6127 6183 F 59 89.83 372 reject_low 7 ALIGNMENT 0 YS2-18h02.p1k chrm 372 255 35112 35111 C 118 0.00 372 reject_low 4 ALIGNMENT 0 YS2-18h02.p1k chrm 372 322 55425 55424 C 51 0.00 372 reject_low 11 ALIGNMENT 28 YS2-18h02.p1k chrm 278 332 56257 56309 F 55 87.27 372 reject_low 10 ALIGNMENT 35 YS2-18h02.p1k chrm 233 285 81514 81566 F 53 88.68 372 reject_low 8 ALIGNMENT 0 YS2-18h02.p1k chrm 62 232 81514 81513 F 171 0.00 372 reject_low 8 ALIGNMENT 0 YS2-18h02.p1k chrm 314 372 84265 84264 F 59 0.00 372 reject_low 3 ALIGNMENT 0 YS2-18h02.p1k chrm 213 239 50740 50725 F 27 0.00 372 reject_low 9 ALIGNMENT 0 YS2-18h02.p1k chrm 281 282 55460 55499 C 0 0.00 372 reject_low 11 ALIGNMENT 78 YS2-18h02.p1k chrm 323 225 85582 85679 C 99 94.95 372 reject_low 2 ALIGNMENT 0 YS2-18h02.p1k chrm 190 62 53758 53757 C 129 0.00 372 reject_low 1 ALIGNMENT 20 YS2-18h02.p1k chrm 268 292 68649 68673 F 25 96.00 372 reject_low 12 ALIGNMENT 0 YS2-18h02.p1k chrm 372 354 13595 13594 C 19 0.00 372 reject_bad_break 0 ALIGNMENT 24 YS2-18h02.p1k chrm 285 240 55496 55540 C 46 86.96 372|4,0 reject_low 11 ALIGNMENT 0 YS2-18h02.p1k chrm 316 194 13631 13627 C 123 0.00 372 reject_bad_break 0 ALIGNMENT 0 YS2-18h02.p1k chrm 62 224 2537 2536 F 163 0.00 372 reject_low 5 ALIGNMENT 0 YS2-18h02.p1k chrm 214 62 55514 55513 C 153 0.00 372 reject_low 6 ALIGNMENT 28 YS2-18h02.p1k chrm 353 317 13594 13630 C 37 100.00 372 reject_bad_break 0 ALIGNMENT 1021 YS2-18h04.p1k chr07 32 1151 445393 446517 F 1120 98.30 1439 accept 0 ALIGNMENT 965 YS2-18h04.q1k chr07 1161 41 450252 451386 C 1121 96.07 1364 accept 0 ALIGNMENT 40 YS2-18h05.q1k vc_3 270 231 2472 2511 C 40 100.00 270 reject_low 2 ALIGNMENT 40 YS2-18h05.q1k vc_4 231 270 5832 5871 F 40 100.00 270 reject_low 3 ALIGNMENT 0 YS2-18h05.q1k vc_7 62 232 13525 13524 F 171 0.00 270 reject_low 5 ALIGNMENT 0 YS2-18h05.q1k vc_4 62 230 5832 5831 F 169 0.00 270 reject_low 3 ALIGNMENT 0 YS2-18h05.q1k vc_5 231 62 37 36 C 170 0.00 270 reject_low 6 ALIGNMENT 192 YS2-18h05.q1k chr15 230 30 127951 128151 C 201 100.00 270 accept 0 ALIGNMENT 0 YS2-18h05.q1k vc_5 231 62 5064 5063 C 170 0.00 270 reject_low 4 ALIGNMENT 40 YS2-18h05.q1k vc_1 270 231 2472 2511 C 40 100.00 270 reject_low 1 ALIGNMENT 0 YS2-18h05.q1k vc_3 230 62 2512 2511 C 169 0.00 270 reject_low 2 ALIGNMENT 0 YS2-18h05.q1k chr15 270 231 127952 127951 C 40 0.00 270 accept 0 ALIGNMENT 0 YS2-18h05.q1k vc_1 230 62 2512 2511 C 169 0.00 270 reject_low 1 ALIGNMENT 36 YS2-18h05.q1k vc_5 267 232 1 36 C 36 100.00 270 reject_low 6 ALIGNMENT 38 YS2-18h05.q1k vc_7 233 270 13525 13562 F 38 100.00 270 reject_low 5 ALIGNMENT 39 YS2-18h05.q1k vc_5 270 232 5025 5063 C 39 100.00 270 reject_low 4 ALIGNMENT 973 YS2-18h06.q1k chr04 1148 29 379227 380360 C 1120 96.16 1371 accept 0 ALIGNMENT 1005 YS2-18h06.p1k chr04 31 1184 378939 380112 F 1154 97.14 1495 accept 0 ALIGNMENT 896 YS2-18h07.q1k chr13 37 1097 296369 297443 F 1061 96.42 1253 accept 0 ALIGNMENT 1001 YS2-18h07.p1k chr13 1138 35 299363 300465 C 1104 98.73 1486 accept 0 ALIGNMENT 979 YS2-18h08.q1k chr12 34 1262 454088 455354 F 1229 94.55 1277 accept 0 ALIGNMENT 1015 YS2-18h08.p1k chr12 1166 32 463405 464552 C 1135 97.44 1492 accept 1 ALIGNMENT 979 YS2-18h08.q1k chr12 34 1262 463225 464491 F 1229 94.55 1277 accept 1 ALIGNMENT 1015 YS2-18h08.p1k chr12 1166 32 454268 455415 C 1135 97.44 1492 accept 0 ALIGNMENT 289 YS2-18h09.q1k vc_3 1 303 2689 2991 F 303 98.68 893 reject_low 6 ALIGNMENT 541 YS2-18h09.q1k vc_7 713 1 1855 2569 C 713 92.57 893 reject_vc 1 ALIGNMENT 51 YS2-18h09.q1k vc_7 54 3 6360 6411 C 52 100.00 893|1,0 reject_low 7 ALIGNMENT 289 YS2-18h09.q1k vc_1 1 303 2689 2991 F 303 98.68 893 reject_low 4 ALIGNMENT 92 YS2-18h09.q1k vc_7 421 305 4583 4699 C 117 94.02 893 reject_low 7 ALIGNMENT 59 YS2-18h09.q1k vc_4 304 238 6273 6339 C 67 97.01 893 reject_low 9 ALIGNMENT 289 YS2-18h09.q1k vc_2 1 303 2322 2624 F 303 98.68 893 reject_low 5 ALIGNMENT 59 YS2-18h09.q1k vc_4 304 238 46 112 C 67 97.01 893 reject_low 8 ALIGNMENT 0 YS2-18h09.q1k vc_4 237 62 6340 6339 C 176 0.00 893 reject_low 9 ALIGNMENT 235 YS2-18h09.q1k vc_7 303 53 4922 5172 C 251 98.01 893|0,1 reject_low 7 ALIGNMENT 0 YS2-18h09.q1k vc_7 53 54 5172 6360 C 0 0.00 893 reject_low 7 ALIGNMENT 0 YS2-18h09.q1k vc_7 304 304 4700 4921 C 1 0.00 893 reject_low 7 ALIGNMENT 541 YS2-18h09.q1k vc_5 1 713 2556 3270 F 713 92.43 893 reject_vc 0 ALIGNMENT 59 YS2-18h09.q1k vc_4 238 304 1548 1614 F 67 97.01 893 reject_low 2 ALIGNMENT 0 YS2-18h09.q1k vc_4 237 62 113 112 C 176 0.00 893 reject_low 8 ALIGNMENT 377 YS2-18h09.q1k vc_4 421 1 5232 5654 C 421 96.91 893 reject_low 3 ALIGNMENT 243 YS2-18h09.q1k vc_4 308 713 1879 2286 F 406 87.44 893 reject_low 2 ALIGNMENT 0 YS2-18h09.q1k vc_4 305 307 1615 1878 F 3 0.00 893 reject_low 2 ALIGNMENT 0 YS2-18h09.q1k vc_4 62 237 1548 1547 F 176 0.00 893 reject_low 2 ALIGNMENT 1044 YS2-18h10.p1k chr09 1202 33 296965 298138 C 1170 97.78 1490 accept 0 ALIGNMENT 966 YS2-18h10.q1k chr09 32 1121 296583 297688 F 1090 97.43 1251 accept 0 ALIGNMENT 965 YS2-18h11.p1k chr10 29 1113 38599 39697 F 1085 97.60 1444 accept 0 ALIGNMENT 1014 YS2-18h11.q1k chr10 1209 40 42779 43959 C 1170 96.32 1283 accept 0 ALIGNMENT 139 YS2-18h12.q1k chr15 188 31 78100 78259 C 158 98.73 227 accept 0 ALIGNMENT 38 YS2-18h12.q1k vc_7 190 227 13525 13562 F 38 100.00 227 reject_low 5 ALIGNMENT 40 YS2-18h12.q1k vc_3 227 188 2472 2511 C 40 100.00 227 reject_low 2 ALIGNMENT 0 YS2-18h12.q1k vc_4 62 187 5832 5831 F 126 0.00 227 reject_low 3 ALIGNMENT 40 YS2-18h12.q1k vc_1 227 188 2472 2511 C 40 100.00 227 reject_low 1 ALIGNMENT 0 YS2-18h12.q1k vc_5 188 62 37 36 C 127 0.00 227 reject_low 6 ALIGNMENT 0 YS2-18h12.q1k chr15 227 189 78101 78100 C 39 0.00 227 accept 0 ALIGNMENT 0 YS2-18h12.q1k vc_3 187 62 2512 2511 C 126 0.00 227 reject_low 2 ALIGNMENT 39 YS2-18h12.q1k vc_5 227 189 5025 5063 C 39 100.00 227 reject_low 4 ALIGNMENT 36 YS2-18h12.q1k vc_5 224 189 1 36 C 36 100.00 227 reject_low 6 ALIGNMENT 40 YS2-18h12.q1k vc_4 188 227 5832 5871 F 40 100.00 227 reject_low 3 ALIGNMENT 0 YS2-18h12.q1k vc_7 62 189 13525 13524 F 128 0.00 227 reject_low 5 ALIGNMENT 0 YS2-18h12.q1k vc_1 187 62 2512 2511 C 126 0.00 227 reject_low 1 ALIGNMENT 0 YS2-18h12.q1k vc_5 188 62 5064 5063 C 127 0.00 227 reject_low 4 ALIGNMENT 958 YS2-18h13.p1k chr05 31 1102 400223 401310 F 1072 97.01 1423 accept 0 ALIGNMENT 918 YS2-18h13.q1k chr05 1101 38 403746 404826 C 1064 96.62 1235 accept 0 ALIGNMENT 0 YS2-18h14.q1k vc_5 268 62 5064 5063 C 207 0.00 307 reject_low 4 ALIGNMENT 41 YS2-18h14.q1k vc_4 267 307 5831 5871 F 41 100.00 307 reject_low 3 ALIGNMENT 0 YS2-18h14.q1k vc_5 268 62 37 36 C 207 0.00 307 reject_low 6 ALIGNMENT 0 YS2-18h14.q1k vc_3 266 62 2513 2512 C 205 0.00 307 reject_low 2 ALIGNMENT 41 YS2-18h14.q1k vc_3 307 267 2472 2512 C 41 100.00 307 reject_low 2 ALIGNMENT 41 YS2-18h14.q1k vc_1 307 267 2472 2512 C 41 100.00 307 reject_low 1 ALIGNMENT 0 YS2-18h14.q1k vc_1 266 62 2513 2512 C 205 0.00 307 reject_low 1 ALIGNMENT 39 YS2-18h14.q1k vc_5 307 269 5025 5063 C 39 100.00 307 reject_low 4 ALIGNMENT 0 YS2-18h14.q1k vc_7 62 269 13525 13524 F 208 0.00 307 reject_low 5 ALIGNMENT 0 YS2-18h14.q1k chr16 267 307 72466 72465 F 41 0.00 307 accept 0 ALIGNMENT 0 YS2-18h14.q1k vc_4 62 266 5831 5830 F 205 0.00 307 reject_low 3 ALIGNMENT 38 YS2-18h14.q1k vc_7 270 307 13525 13562 F 38 100.00 307 reject_low 5 ALIGNMENT 217 YS2-18h14.q1k chr16 33 266 72232 72466 F 234 99.57 307 accept 0 ALIGNMENT 36 YS2-18h14.q1k vc_5 304 269 1 36 C 36 100.00 307 reject_low 6 ALIGNMENT 0 YS2-18h15.q1k chr04 862 231 308792 308791 C 632 0.00 1372 reject_low 1 ALIGNMENT 990 YS2-18h15.p1k chr13 1198 35 553975 555147 C 1164 96.48 1494 accept 0 ALIGNMENT 140 YS2-18h15.q1k chr04 230 27 308791 308994 C 204 89.71 1372 reject_low 1 ALIGNMENT 1024 YS2-18h15.q1k chr13 27 1149 550599 551732 F 1123 97.77 1372 accept 0 ALIGNMENT 983 YS2-18h16.p1k chr07 35 1189 208773 209935 F 1155 95.84 1473 accept 0 ALIGNMENT 0 YS2-18h16.p1k chr07 62 289 423987 423986 F 228 0.00 1473 reject_low 1 ALIGNMENT 921 YS2-18h16.q1k chr07 1112 41 212634 213718 C 1072 95.80 1354 accept 0 ALIGNMENT 180 YS2-18h16.p1k chr07 290 892 423987 424589 F 603 77.45 1473 reject_low 1 ALIGNMENT 0 YS2-18h17.q1k scplasm1 374 416 2956 3187 F 43 0.00 1264 reject_bad_break 1 ALIGNMENT 128 YS2-18h17.p1k chr06 712 876 191437 191602 F 165 93.94 1406 reject_low 2 ALIGNMENT 898 YS2-18h17.p1k chr15 1031 32 274506 275516 C 1000 97.50 1406 accept_chi 0 ALIGNMENT 0 YS2-18h17.p1k chr12 769 93 784459 784458 C 677 0.00 1406 reject_low 5 ALIGNMENT 0 YS2-18h17.q1k scplasm1 949 62 928 927 C 888 0.00 1264 reject_low 3 ALIGNMENT 0 YS2-18h17.p1k chr06 93 711 191437 191436 F 619 0.00 1406 reject_low 2 ALIGNMENT 65 YS2-18h17.q1k scplasm1 1223 950 660 927 C 274 78.10 1264 reject_low 3 ALIGNMENT 98 YS2-18h17.p1k chr12 875 770 784354 784458 C 106 98.11 1406 reject_low 5 ALIGNMENT 201 YS2-18h17.q1k scplasm1 40 373 2622 2955 F 334 87.43 1264 reject_bad_break 1 ALIGNMENT 129 YS2-18h17.q1k scplasm1 417 1223 3188 3993 F 807 75.09 1264 reject_bad_break 1 ALIGNMENT 99 YS2-18h17.p1k chr04 764 875 1150822 1150933 F 112 97.32 1406 reject_low 4 ALIGNMENT 0 YS2-18h17.p1k chr04 93 763 1150822 1150821 F 671 0.00 1406 reject_low 4 ALIGNMENT 473 YS2-18h18.p1k vc_2 670 1 1076 1749 C 670 90.90 985 reject_low 3 ALIGNMENT 0 YS2-18h18.q1k vc_4 62 237 1548 1547 F 176 0.00 953 reject_low 7 ALIGNMENT 0 YS2-18h18.q1k vc_7 304 304 4700 4921 C 1 0.00 953 reject_low 12 ALIGNMENT 247 YS2-18h18.q1k vc_7 303 53 4922 5172 C 251 99.60 953|0,1 reject_low 12 ALIGNMENT 672 YS2-18h18.q1k vc_7 827 1 1746 2569 C 827 94.32 953 reject_low 1 ALIGNMENT 0 YS2-18h18.q1k vc_2 304 491 2624 2623 F 188 0.00 953 reject_low 10 ALIGNMENT 0 YS2-18h18.q1k vc_1 304 491 2991 2990 F 188 0.00 953 reject_low 9 ALIGNMENT 467 YS2-18h18.p1k vc_7 1 670 13918 14591 F 670 90.60 985 reject_low 5 ALIGNMENT 0 YS2-18h18.q1k vc_3 304 491 2991 2990 F 188 0.00 953 reject_low 11 ALIGNMENT 0 YS2-18h18.q1k vc_7 491 422 4584 4583 C 70 0.00 953 reject_low 12 ALIGNMENT 51 YS2-18h18.q1k vc_7 54 3 6360 6411 C 52 100.00 953|1,0 reject_low 12 ALIGNMENT 679 YS2-18h18.q1k vc_5 1 915 2556 3457 F 915 92.79 953 reject_vc 0 ALIGNMENT 366 YS2-18h18.q1k vc_4 308 915 1879 2473 F 608 88.98 953 reject_low 7 ALIGNMENT 0 YS2-18h18.q1k vc_4 491 305 47 46 C 187 0.00 953 reject_low 13 ALIGNMENT 473 YS2-18h18.p1k vc_5 670 1 3996 4669 C 670 90.90 985 reject_vc 0 ALIGNMENT 65 YS2-18h18.q1k vc_4 238 304 1548 1614 F 67 100.00 953 reject_low 7 ALIGNMENT 302 YS2-18h18.q1k vc_3 1 303 2689 2991 F 303 100.00 953 reject_low 11 ALIGNMENT 0 YS2-18h18.q1k vc_4 305 307 1615 1878 F 3 0.00 953 reject_low 7 ALIGNMENT 65 YS2-18h18.q1k vc_4 304 238 6273 6339 C 67 100.00 953 reject_low 14 ALIGNMENT 467 YS2-18h18.p1k vc_7 1 670 456 1129 F 670 90.60 985 reject_low 1 ALIGNMENT 413 YS2-18h18.q1k vc_4 421 1 5232 5654 C 421 99.52 953 reject_low 8 ALIGNMENT 0 YS2-18h18.q1k vc_4 491 422 5233 5232 C 70 0.00 953 reject_low 8 ALIGNMENT 302 YS2-18h18.q1k vc_1 1 303 2689 2991 F 303 100.00 953 reject_low 9 ALIGNMENT 0 YS2-18h18.q1k vc_4 491 305 6274 6273 C 187 0.00 953 reject_low 14 ALIGNMENT 115 YS2-18h18.q1k vc_7 421 305 4583 4699 C 117 100.00 953 reject_low 12 ALIGNMENT 473 YS2-18h18.p1k vc_3 670 1 1076 1749 C 670 90.90 985 reject_low 4 ALIGNMENT 0 YS2-18h18.q1k vc_7 53 54 5172 6360 C 0 0.00 953 reject_low 12 ALIGNMENT 473 YS2-18h18.p1k vc_1 670 1 1076 1749 C 670 90.90 985 reject_low 2 ALIGNMENT 302 YS2-18h18.q1k vc_2 1 303 2322 2624 F 303 100.00 953 reject_low 10 ALIGNMENT 0 YS2-18h18.q1k vc_4 237 62 113 112 C 176 0.00 953 reject_low 13 ALIGNMENT 451 YS2-18h18.p1k vc_6 1 579 3712 4292 F 579 93.44 985 reject_low 6 ALIGNMENT 0 YS2-18h18.q1k vc_4 237 62 6340 6339 C 176 0.00 953 reject_low 14 ALIGNMENT 65 YS2-18h18.q1k vc_4 304 238 46 112 C 67 100.00 953 reject_low 13 ALIGNMENT 0 YS2-18h19.p1k chrm 92 752 24566 24565 F 661 0.00 1529 reject_low 1 ALIGNMENT 0 YS2-18h19.q1k chrm 838 344 55426 55425 C 495 0.00 1250 reject_low 7 ALIGNMENT 20 YS2-18h19.q1k chrm 679 642 6192 6231 C 38 89.47 1250 reject_low 4 ALIGNMENT 544 YS2-18h19.p1k chrm 31 718 23876 24564 F 688 98.98 1529 accept 0 ALIGNMENT 507 YS2-18h19.q1k chrm 645 37 24566 25175 C 609 99.18 1250 accept 0 ALIGNMENT 26 YS2-18h19.q1k chrm 343 306 65693 65731 C 38 94.74 1250 reject_low 8 ALIGNMENT 35 YS2-18h19.q1k chrm 350 306 77054 77098 C 45 93.33 1250 reject_low 5 ALIGNMENT 321 YS2-18h19.q1k chrm 1230 680 24013 24564 C 551 92.01 1250 accept 0 ALIGNMENT 0 YS2-18h19.q1k chrm 305 62 77099 77098 C 244 0.00 1250 reject_low 5 ALIGNMENT 0 YS2-18h19.q1k chrm 305 62 55463 55462 C 244 0.00 1250 reject_low 7 ALIGNMENT 0 YS2-18h19.q1k chrm 345 838 6230 6229 F 494 0.00 1250 reject_low 6 ALIGNMENT 0 YS2-18h19.q1k chrm 838 351 77055 77054 C 488 0.00 1250 reject_low 5 ALIGNMENT 0 YS2-18h19.q1k chrm 679 646 24565 24565 C 34 0.00 1250 accept 0 ALIGNMENT 0 YS2-18h19.p1k chrm 870 756 24868 24867 C 115 0.00 1529 reject_low 2 ALIGNMENT 0 YS2-18h19.p1k chrm 712 92 24913 24912 C 621 0.00 1529 reject_low 2 ALIGNMENT 0 YS2-18h19.q1k chrm 838 344 65694 65693 C 495 0.00 1250 reject_low 8 ALIGNMENT 0 YS2-18h19.q1k chrm 62 642 24867 24866 F 581 0.00 1250 reject_low 3 ALIGNMENT 0 YS2-18h19.q1k chrm 305 62 65732 65731 C 244 0.00 1250 reject_low 8 ALIGNMENT 30 YS2-18h19.q1k chrm 343 306 55425 55462 C 38 97.37 1250 reject_low 7 ALIGNMENT 0 YS2-18h19.q1k chrm 686 838 24912 24911 F 153 0.00 1250 reject_low 3 ALIGNMENT 21 YS2-18h19.q1k chrm 643 685 24867 24912 F 43 86.05 1250 reject_low 3 ALIGNMENT 21 YS2-18h19.p1k chrm 755 713 24867 24912 C 43 86.05 1529 reject_low 2 ALIGNMENT 0 YS2-18h19.q1k chrm 641 62 6232 6231 C 580 0.00 1250 reject_low 4 ALIGNMENT 0 YS2-18h19.p1k chrm 719 870 24564 24563 F 152 0.00 1529 accept 0 ALIGNMENT 0 YS2-18h19.q1k chrm 62 305 6192 6191 F 244 0.00 1250 reject_low 6 ALIGNMENT 264 YS2-18h19.p1k chrm 753 1205 24566 25031 F 453 90.29 1529 reject_low 1 ALIGNMENT 32 YS2-18h19.q1k chrm 306 344 6192 6230 F 39 97.44 1250 reject_low 6 ALIGNMENT 0 YS2-18h19.q1k chrm 838 680 6193 6192 C 159 0.00 1250 reject_low 4 ALIGNMENT 1002 YS2-18h20.q1k chr05 42 1185 124568 125715 F 1144 96.50 1258 accept 0 ALIGNMENT 952 YS2-18h20.p1k chr05 1099 34 128484 129564 C 1066 97.56 1392 accept 0 ALIGNMENT 374 YS2-18h23.p1k chr16 32 422 378312 378704 F 391 99.23 440 accept_chi 1 ALIGNMENT 0 YS2-18h23.q1k vc_4 62 428 5831 5830 F 367 0.00 469 reject_low 4 ALIGNMENT 0 YS2-18h23.q1k vc_5 430 62 5064 5063 C 369 0.00 469 reject_low 5 ALIGNMENT 0 YS2-18h23.q1k chr16 469 430 378313 378312 C 40 0.00 469 accept_chi 0 ALIGNMENT 39 YS2-18h23.q1k vc_5 469 431 5025 5063 C 39 100.00 469 reject_low 5 ALIGNMENT 0 YS2-18h23.q1k vc_3 428 62 2513 2512 C 367 0.00 469 reject_low 3 ALIGNMENT 41 YS2-18h23.q1k vc_4 429 469 5831 5871 F 41 100.00 469 reject_low 4 ALIGNMENT 41 YS2-18h23.q1k vc_3 469 429 2472 2512 C 41 100.00 469 reject_low 3 ALIGNMENT 0 YS2-18h23.q1k vc_1 428 62 2513 2512 C 367 0.00 469 reject_low 2 ALIGNMENT 0 YS2-18h23.p1k chr16 423 440 378704 378703 F 18 0.00 440 accept_chi 1 ALIGNMENT 38 YS2-18h23.q1k vc_7 432 469 13525 13562 F 38 100.00 469 reject_low 6 ALIGNMENT 36 YS2-18h23.q1k vc_5 466 431 1 36 C 36 100.00 469 reject_low 7 ALIGNMENT 0 YS2-18h23.q1k vc_7 62 431 13525 13524 F 370 0.00 469 reject_low 6 ALIGNMENT 384 YS2-18h23.q1k chr16 429 37 378312 378704 C 393 99.75 469 accept_chi 0 ALIGNMENT 0 YS2-18h23.q1k vc_5 430 62 37 36 C 369 0.00 469 reject_low 7 ALIGNMENT 41 YS2-18h23.q1k vc_1 469 429 2472 2512 C 41 100.00 469 reject_low 2 ALIGNMENT 0 YS2-18h24.q1k chr04 308 62 987418 987417 C 247 0.00 1246 reject_low 11 ALIGNMENT 0 YS2-18h24.q1k chr12 847 572 818074 818073 C 276 0.00 1246 reject_low 8 ALIGNMENT 0 YS2-18h24.q1k chr05 308 62 449257 449256 C 247 0.00 1246 reject_low 10 ALIGNMENT 0 YS2-18h24.q1k chr04 847 557 987160 987159 C 291 0.00 1246 reject_low 11 ALIGNMENT 0 YS2-18h24.q1k chr07 62 431 535965 535964 F 370 0.00 1246 reject_low 6 ALIGNMENT 0 YS2-18h24.q1k chr16 62 431 560673 560672 F 370 0.00 1246 reject_low 3 ALIGNMENT 40 YS2-18h24.q1k chr11 546 410 313272 313404 C 137 79.56 1246 reject_low 9 ALIGNMENT 0 YS2-18h24.q1k chr12 435 62 818206 818205 C 374 0.00 1246 reject_low 8 ALIGNMENT 0 YS2-18h24.q1k chr16 62 431 56652 56651 F 370 0.00 1246 reject_low 2 ALIGNMENT 0 YS2-18h24.q1k chr16 572 847 56788 56787 F 276 0.00 1246 reject_low 2 ALIGNMENT 0 YS2-18h24.q1k chr13 431 62 372833 372832 C 370 0.00 1246 reject_low 5 ALIGNMENT 30 YS2-18h24.q1k chr07 432 546 535965 536076 F 115 78.26 1246 reject_low 6 ALIGNMENT 0 YS2-18h24.q1k chr11 315 62 313512 313511 C 254 0.00 1246 reject_low 9 ALIGNMENT 831 YS2-18h24.q1k chr07 35 904 793028 793897 F 870 99.31 1246 accept 0 ALIGNMENT 0 YS2-18h24.q1k chr13 62 431 184365 184364 F 370 0.00 1246 reject_low 4 ALIGNMENT 0 YS2-18h24.q1k chr14 431 62 102329 102328 C 370 0.00 1246 reject_low 1 ALIGNMENT 25 YS2-18h24.q1k chr04 556 474 987159 987237 C 83 80.72 1246 reject_low 11 ALIGNMENT 0 YS2-18h24.q1k chr16 473 62 810319 810318 C 412 0.00 1246 reject_low 7 ALIGNMENT 0 YS2-18h24.q1k chr05 431 391 449117 449174 C 41 0.00 1246 reject_low 10 ALIGNMENT 33 YS2-18h24.q1k chr05 571 432 448980 449116 C 140 77.14 1246 reject_low 10 ALIGNMENT 0 YS2-18h24.q1k chr07 547 847 536076 536075 F 301 0.00 1246 reject_low 6 ALIGNMENT 0 YS2-18h24.q1k chr13 557 847 184486 184485 F 291 0.00 1246 reject_low 4 ALIGNMENT 0 YS2-18h24.q1k chr05 847 572 448981 448980 C 276 0.00 1246 reject_low 10 ALIGNMENT 30 YS2-18h24.q1k chr11 403 316 313424 313511 C 88 80.68 1246 reject_low 9 ALIGNMENT 0 YS2-18h24.q1k chr04 473 391 987238 987335 C 83 0.00 1246 reject_low 11 ALIGNMENT 30 YS2-18h24.q1k chr16 432 571 560673 560809 F 140 76.43 1246 reject_low 3 ALIGNMENT 0 YS2-18h24.q1k chr11 409 404 313405 313423 C 6 0.00 1246 reject_low 9 ALIGNMENT 928 YS2-18h24.p1k chr07 1066 33 797161 798205 C 1034 97.29 1327 accept 0 ALIGNMENT 0 YS2-18h24.q1k chr16 572 847 560809 560808 F 276 0.00 1246 reject_low 3 ALIGNMENT 20 YS2-18h24.q1k chr04 390 309 987336 987417 C 82 76.83 1246 reject_low 11 ALIGNMENT 23 YS2-18h24.q1k chr12 571 436 818073 818205 C 136 75.00 1246 reject_low 8 ALIGNMENT 0 YS2-18h24.q1k chr13 847 557 372712 372711 C 291 0.00 1246 reject_low 5 ALIGNMENT 31 YS2-18h24.q1k chr13 556 432 372711 372832 C 125 77.60 1246 reject_low 5 ALIGNMENT 33 YS2-18h24.q1k chr14 571 432 102192 102328 C 140 77.14 1246 reject_low 1 ALIGNMENT 0 YS2-18h24.q1k chr16 847 572 810226 810225 C 276 0.00 1246 reject_low 7 ALIGNMENT 27 YS2-18h24.q1k chr16 571 474 810225 810318 C 98 79.59 1246 reject_low 7 ALIGNMENT 0 YS2-18h24.q1k chr11 847 547 313273 313272 C 301 0.00 1246 reject_low 9 ALIGNMENT 0 YS2-18h24.q1k chr14 847 572 102193 102192 C 276 0.00 1246 reject_low 1 ALIGNMENT 20 YS2-18h24.q1k chr05 390 309 449175 449256 C 82 76.83 1246 reject_low 10 ALIGNMENT 33 YS2-18h24.q1k chr16 432 571 56652 56788 F 140 77.14 1246 reject_low 2 ALIGNMENT 31 YS2-18h24.q1k chr13 432 556 184365 184486 F 125 77.60 1246 reject_low 4 ALIGNMENT 0 YS2-18i02.q1k vc_5 366 62 5064 5063 C 305 0.00 405 reject_low 6 ALIGNMENT 326 YS2-18i02.p1k chr12 370 35 464938 465272 C 336 99.40 389 accept 0 ALIGNMENT 0 YS2-18i02.p1k chr12 389 371 464939 464938 C 19 0.00 389 accept 0 ALIGNMENT 0 YS2-18i02.p1k chr12 389 371 455802 455801 C 19 0.00 389 reject_low 2 ALIGNMENT 0 YS2-18i02.q1k vc_3 364 62 2513 2512 C 303 0.00 405 reject_low 4 ALIGNMENT 41 YS2-18i02.q1k vc_4 365 405 5831 5871 F 41 100.00 405 reject_low 5 ALIGNMENT 0 YS2-18i02.q1k chr12 365 405 456135 456134 F 41 0.00 405 accept 0 ALIGNMENT 326 YS2-18i02.p1k chr12 370 35 455801 456135 C 336 99.40 389 reject_low 2 ALIGNMENT 0 YS2-18i02.q1k vc_7 62 367 13525 13524 F 306 0.00 405 reject_low 7 ALIGNMENT 41 YS2-18i02.q1k vc_1 405 365 2472 2512 C 41 100.00 405 reject_low 3 ALIGNMENT 0 YS2-18i02.q1k chr12 365 405 465272 465271 F 41 0.00 405 reject_low 1 ALIGNMENT 329 YS2-18i02.q1k chr12 29 364 455801 456135 F 336 99.70 405 accept 0 ALIGNMENT 41 YS2-18i02.q1k vc_3 405 365 2472 2512 C 41 100.00 405 reject_low 4 ALIGNMENT 0 YS2-18i02.q1k vc_4 62 364 5831 5830 F 303 0.00 405 reject_low 5 ALIGNMENT 39 YS2-18i02.q1k vc_5 405 367 5025 5063 C 39 100.00 405 reject_low 6 ALIGNMENT 0 YS2-18i02.q1k vc_1 364 62 2513 2512 C 303 0.00 405 reject_low 3 ALIGNMENT 0 YS2-18i02.q1k vc_5 366 62 37 36 C 305 0.00 405 reject_low 8 ALIGNMENT 38 YS2-18i02.q1k vc_7 368 405 13525 13562 F 38 100.00 405 reject_low 7 ALIGNMENT 329 YS2-18i02.q1k chr12 29 364 464938 465272 F 336 99.70 405 reject_low 1 ALIGNMENT 36 YS2-18i02.q1k vc_5 402 367 1 36 C 36 100.00 405 reject_low 8 ALIGNMENT 0 YS2-18i03.q1k chr15 332 62 970365 970364 C 271 0.00 1227 reject_low 38 ALIGNMENT 0 YS2-18i03.q1k chr08 62 104 389187 389186 F 43 0.00 1227 reject_low 26 ALIGNMENT 20 YS2-18i03.q1k chr14 165 104 519427 519491 C 62 82.26 1227 reject_low 22 ALIGNMENT 0 YS2-18i03.q1k chr15 156 926 709751 709750 F 771 0.00 1227 reject_low 27 ALIGNMENT 0 YS2-18i03.q1k chr01 62 642 160239 160238 F 581 0.00 1227 reject_low 18 ALIGNMENT 0 YS2-18i03.q1k chr10 926 361 204038 204037 C 566 0.00 1227 reject_low 29 ALIGNMENT 37 YS2-18i03.q1k chr10 921 743 204036 204212 C 179 78.21 1227 reject_low 39 ALIGNMENT 0 YS2-18i03.q1k chr03 62 103 124137 124136 F 42 0.00 1227 reject_low 46 ALIGNMENT 0 YS2-18i03.q1k chr01 62 103 165833 165832 F 42 0.00 1227 reject_low 19 ALIGNMENT 266 YS2-18i03.q1k chr10 641 972 203702 204032 F 332 96.08 1227 reject_low 4 ALIGNMENT 0 YS2-18i03.q1k chr15 731 926 976337 976336 F 196 0.00 1227 reject_low 41 ALIGNMENT 0 YS2-18i03.q1k chr04 62 332 513934 513933 F 271 0.00 1227 reject_low 35 ALIGNMENT 269 YS2-18i03.q1k chr08 650 972 91770 92092 F 323 96.90 1227 reject_low 8 ALIGNMENT 46 YS2-18i03.q1k chr03 694 972 142798 143074 F 279 75.63 1227 reject_low 33 ALIGNMENT 0 YS2-18i03.q1k chr05 156 926 431545 431544 F 771 0.00 1227 reject_low 24 ALIGNMENT 270 YS2-18i03.q1k chr09 972 652 246220 246540 C 321 97.20 1227 reject_low 7 ALIGNMENT 20 YS2-18i03.q1k chr14 165 104 524993 525057 C 62 82.26 1227 reject_low 43 ALIGNMENT 191 YS2-18i03.q1k chr01 643 972 165827 166160 F 330 89.09 1227 reject_low 44 ALIGNMENT 255 YS2-18i03.q1k chr10 972 653 538020 538338 C 320 95.94 1227 reject_low 11 ALIGNMENT 0 YS2-18i03.q1k chr15 926 365 970334 970333 C 562 0.00 1227 reject_low 38 ALIGNMENT 38 YS2-18i03.q1k chr03 259 364 142921 143026 F 106 82.08 1227 reject_low 28 ALIGNMENT 51 YS2-18i03.q1k chr03 364 259 149531 149635 C 106 85.85 1227 reject_low 23 ALIGNMENT 0 YS2-18i03.q1k chr03 258 62 149636 149635 C 197 0.00 1227 reject_low 23 ALIGNMENT 0 YS2-18i03.q1k chr01 166 926 165897 165896 F 761 0.00 1227 reject_low 19 ALIGNMENT 255 YS2-18i03.q1k chr12 972 653 946819 947137 C 320 95.94 1227 reject_low 12 ALIGNMENT 84 YS2-18i03.q1k chr03 643 972 124131 124459 F 330 78.79 1227 reject_low 32 ALIGNMENT 20 YS2-18i03.q1k chr15 105 155 709699 709751 F 51 86.27 1227 reject_low 27 ALIGNMENT 0 YS2-18i03.q1k chr14 926 166 519428 519427 C 761 0.00 1227 reject_low 22 ALIGNMENT 140 YS2-18i03.q1k chr12 840 643 598866 599064 C 198 92.93 1227 accept_trans 0 ALIGNMENT 246 YS2-18i03.q1k chr15 972 653 975912 976230 C 320 95.00 1227 reject_low 15 ALIGNMENT 36 YS2-18i03.q1k chr10 827 931 537834 537937 F 105 80.95 1227 reject_low 40 ALIGNMENT 271 YS2-18i03.q1k chr13 641 972 168347 168678 F 332 96.39 1227 reject_low 1 ALIGNMENT 0 YS2-18i03.q1k chr03 62 642 168595 168594 F 581 0.00 1227 reject_low 13 ALIGNMENT 246 YS2-18i03.q1k chr15 972 653 970285 970603 C 320 95.00 1227 reject_low 45 ALIGNMENT 261 YS2-18i03.q1k chr04 653 972 513695 514013 F 320 96.56 1227 reject_low 9 ALIGNMENT 0 YS2-18i03.q1k chr03 258 62 151674 151673 C 197 0.00 1227 reject_low 48 ALIGNMENT 0 YS2-18i03.q1k chr10 62 640 203702 203701 F 579 0.00 1227 reject_low 4 ALIGNMENT 0 YS2-18i03.q1k chr03 926 365 149532 149531 C 562 0.00 1227 reject_low 23 ALIGNMENT 0 YS2-18i03.q1k chr10 62 265 537834 537833 F 204 0.00 1227 reject_low 30 ALIGNMENT 39 YS2-18i03.q1k chr03 364 259 151568 151673 C 106 82.08 1227 reject_low 48 ALIGNMENT 22 YS2-18i03.q1k chr10 364 333 538068 538099 C 32 90.62 1227 reject_low 36 ALIGNMENT 22 YS2-18i03.q1k chr15 364 333 970333 970364 C 32 90.62 1227 reject_low 38 ALIGNMENT 20 YS2-18i03.q1k chr05 105 155 431493 431545 F 51 86.27 1227 reject_low 24 ALIGNMENT 0 YS2-18i03.q1k chr12 642 571 599065 599064 C 72 0.00 1227 accept_trans 0 ALIGNMENT 0 YS2-18i03.q1k chr03 973 990 143075 151744 F 18 0.00 1227 reject_low 33 ALIGNMENT 0 YS2-18i03.q1k chr12 926 841 598867 598866 C 86 0.00 1227 accept_trans 0 ALIGNMENT 79 YS2-18i03.q1k chr03 942 639 149513 149810 C 304 79.61 1227 reject_low 48 ALIGNMENT 0 YS2-18i03.q1k chr15 652 62 976231 976230 C 591 0.00 1227 reject_low 15 ALIGNMENT 0 YS2-18i03.q1k chr08 62 104 91770 91769 F 43 0.00 1227 reject_low 25 ALIGNMENT 0 YS2-18i03.q1k chr03 638 365 149811 151567 C 274 0.00 1227 reject_low 48 ALIGNMENT 0 YS2-18i03.q1k chr12 62 642 731670 731669 F 581 0.00 1227 reject_low 3 ALIGNMENT 0 YS2-18i03.q1k chr15 62 641 704063 704062 F 580 0.00 1227 reject_low 5 ALIGNMENT 0 YS2-18i03.q1k chr12 332 62 946899 946898 C 271 0.00 1227 reject_low 37 ALIGNMENT 0 YS2-18i03.q1k chr03 652 62 151839 151838 C 591 0.00 1227 reject_low 31 ALIGNMENT 0 YS2-18i03.q1k chr09 651 62 246541 246540 C 590 0.00 1227 reject_low 7 ALIGNMENT 0 YS2-18i03.q1k chr05 62 642 431486 431485 F 581 0.00 1227 reject_low 6 ALIGNMENT 22 YS2-18i03.q1k chr03 364 333 90488 90519 C 32 90.62 1227 reject_low 34 ALIGNMENT 0 YS2-18i03.q1k chr10 926 365 538069 538068 C 562 0.00 1227 reject_low 36 ALIGNMENT 0 YS2-18i03.q1k chr10 62 104 203711 203710 F 43 0.00 1227 reject_low 47 ALIGNMENT 0 YS2-18i03.q1k chr15 332 62 975992 975991 C 271 0.00 1227 reject_low 45 ALIGNMENT 0 YS2-18i03.q1k chr07 62 662 561867 561866 F 601 0.00 1227 reject_low 17 ALIGNMENT 273 YS2-18i03.q1k chr08 642 972 389179 389509 F 331 96.68 1227 reject_low 2 ALIGNMENT 20 YS2-18i03.q1k chr01 104 165 160245 160309 F 62 82.26 1227 reject_low 44 ALIGNMENT 22 YS2-18i03.q1k chr04 333 364 513934 513965 F 32 90.62 1227 reject_low 35 ALIGNMENT 0 YS2-18i03.q1k chr03 365 926 124411 124410 F 562 0.00 1227 reject_low 46 ALIGNMENT 0 YS2-18i03.q1k chr15 652 365 970604 975959 C 288 0.00 1227 reject_low 45 ALIGNMENT 0 YS2-18i03.q1k chr15 62 646 976257 976256 F 585 0.00 1227 reject_low 41 ALIGNMENT 20 YS2-18i03.q1k chr15 105 155 704071 704123 F 51 86.27 1227 reject_low 42 ALIGNMENT 30 YS2-18i03.q1k chr10 266 364 537834 537930 F 99 79.80 1227 reject_low 30 ALIGNMENT 0 YS2-18i03.q1k chr08 156 926 389239 389238 F 771 0.00 1227 reject_low 26 ALIGNMENT 0 YS2-18i03.q1k chr15 62 104 704071 704070 F 43 0.00 1227 reject_low 42 ALIGNMENT 0 YS2-18i03.q1k chr03 166 926 168665 168664 F 761 0.00 1227 reject_low 20 ALIGNMENT 0 YS2-18i03.q1k chr12 103 62 599059 599058 C 42 0.00 1227 reject_low 21 ALIGNMENT 0 YS2-18i03.q1k chr04 62 662 645517 645516 F 601 0.00 1227 reject_low 16 ALIGNMENT 275 YS2-18i03.q1k chr12 643 972 731670 731999 F 330 96.97 1227 reject_low 3 ALIGNMENT 0 YS2-18i03.q1k chr10 332 62 538100 538099 C 271 0.00 1227 reject_low 36 ALIGNMENT 0 YS2-18i03.q1k chr08 156 926 91822 91821 F 771 0.00 1227 reject_low 25 ALIGNMENT 272 YS2-18i03.q1k chr05 643 972 431486 431815 F 330 96.67 1227 reject_low 6 ALIGNMENT 0 YS2-18i03.q1k chr13 62 640 168347 168346 F 579 0.00 1227 reject_low 1 ALIGNMENT 0 YS2-18i03.q1k chr14 641 62 525065 525064 C 580 0.00 1227 reject_low 14 ALIGNMENT 471 YS2-18i03.q1k chr12 570 35 599065 599601 C 536 98.13 1227 accept_trans 0 ALIGNMENT 0 YS2-18i03.q1k chr04 62 652 513695 513694 F 591 0.00 1227 reject_low 9 ALIGNMENT 0 YS2-18i03.q1k chr14 642 166 519498 524992 C 477 0.00 1227 reject_low 43 ALIGNMENT 244 YS2-18i03.q1k chr14 972 643 519167 519497 C 330 93.94 1227 reject_low 43 ALIGNMENT 0 YS2-18i03.q1k chr10 365 926 537930 537929 F 562 0.00 1227 reject_low 30 ALIGNMENT 22 YS2-18i03.q1k chr10 333 364 203953 203984 F 32 90.62 1227 reject_low 47 ALIGNMENT 0 YS2-18i03.q1k chr03 926 365 90489 90488 C 562 0.00 1227 reject_low 34 ALIGNMENT 0 YS2-18i03.q1k chr10 652 62 538339 538338 C 591 0.00 1227 reject_low 11 ALIGNMENT 87 YS2-18i03.q1k chr03 972 653 151521 151838 C 320 79.69 1227 reject_low 31 ALIGNMENT 0 YS2-18i03.q1k chr10 156 332 203764 203952 F 177 0.00 1227 reject_low 47 ALIGNMENT 38 YS2-18i03.q1k chr10 360 259 204037 204138 C 102 82.35 1227 reject_low 29 ALIGNMENT 191 YS2-18i03.q1k chr01 643 972 160239 160572 F 330 89.09 1227 reject_low 18 ALIGNMENT 0 YS2-18i03.q1k chr01 166 642 160310 165826 F 477 0.00 1227 reject_low 44 ALIGNMENT 0 YS2-18i03.q1k chr10 258 62 204139 204138 C 197 0.00 1227 reject_low 29 ALIGNMENT 245 YS2-18i03.q1k chr14 972 642 524733 525064 C 331 93.96 1227 reject_low 14 ALIGNMENT 23 YS2-18i03.q1k chr15 647 730 976257 976337 F 84 80.95 1227 reject_low 41 ALIGNMENT 269 YS2-18i03.q1k chr15 643 972 709692 710021 F 330 96.36 1227 reject_low 42 ALIGNMENT 0 YS2-18i03.q1k chr15 156 642 704124 709691 F 487 0.00 1227 reject_low 42 ALIGNMENT 22 YS2-18i03.q1k chr15 364 333 975960 975991 C 32 90.62 1227 reject_low 45 ALIGNMENT 0 YS2-18i03.q1k chr03 166 258 124202 124305 F 93 0.00 1227 reject_low 46 ALIGNMENT 20 YS2-18i03.q1k chr03 104 165 168601 168665 F 62 82.26 1227 reject_low 20 ALIGNMENT 0 YS2-18i03.q1k chr08 62 649 91770 91769 F 588 0.00 1227 reject_low 8 ALIGNMENT 0 YS2-18i03.q1k chr10 62 826 537834 537833 F 765 0.00 1227 reject_low 40 ALIGNMENT 240 YS2-18i03.q1k chr07 663 972 561867 562177 F 310 94.84 1227 reject_low 17 ALIGNMENT 20 YS2-18i03.q1k chr08 105 155 389187 389239 F 51 86.27 1227 reject_low 26 ALIGNMENT 250 YS2-18i03.q1k chr03 643 972 168595 168925 F 330 94.55 1227 reject_low 13 ALIGNMENT 255 YS2-18i03.q1k chr03 972 653 90440 90758 C 320 95.94 1227 reject_low 10 ALIGNMENT 20 YS2-18i03.q1k chr01 104 165 165833 165897 F 62 82.26 1227 reject_low 19 ALIGNMENT 0 YS2-18i03.q1k chr08 62 641 389179 389178 F 580 0.00 1227 reject_low 2 ALIGNMENT 0 YS2-18i03.q1k chr03 62 693 142798 142797 F 632 0.00 1227 reject_low 33 ALIGNMENT 0 YS2-18i03.q1k chr12 652 62 947138 947137 C 591 0.00 1227 reject_low 12 ALIGNMENT 20 YS2-18i03.q1k chr10 105 155 203711 203763 F 51 86.27 1227 reject_low 47 ALIGNMENT 22 YS2-18i03.q1k chr12 364 333 946867 946898 C 32 90.62 1227 reject_low 37 ALIGNMENT 0 YS2-18i03.q1k chr03 62 103 168601 168600 F 42 0.00 1227 reject_low 20 ALIGNMENT 35 YS2-18i03.q1k chr03 259 364 124306 124411 F 106 81.13 1227 reject_low 46 ALIGNMENT 0 YS2-18i03.q1k chr03 652 62 90759 90758 C 591 0.00 1227 reject_low 10 ALIGNMENT 0 YS2-18i03.q1k chr10 365 926 203984 203983 F 562 0.00 1227 reject_low 47 ALIGNMENT 0 YS2-18i03.q1k chr12 926 166 598995 598994 C 761 0.00 1227 reject_low 21 ALIGNMENT 20 YS2-18i03.q1k chr08 105 155 91770 91822 F 51 86.27 1227 reject_low 25 ALIGNMENT 1050 YS2-18i03.p1k chr12 25 1290 588825 590098 F 1266 96.05 1464 accept_trans 0 ALIGNMENT 21 YS2-18i03.q1k chr03 991 1015 151745 151770 F 25 96.00 1227 reject_low 28,33 ALIGNMENT 0 YS2-18i03.q1k chr15 62 104 709699 709698 F 43 0.00 1227 reject_low 27 ALIGNMENT 241 YS2-18i03.q1k chr04 663 972 645517 645827 F 310 95.16 1227 reject_low 16 ALIGNMENT 0 YS2-18i03.q1k chr05 62 104 431493 431492 F 43 0.00 1227 reject_low 24 ALIGNMENT 0 YS2-18i03.q1k chr01 62 103 160245 160244 F 42 0.00 1227 reject_low 44 ALIGNMENT 20 YS2-18i03.q1k chr03 104 165 124137 124201 F 62 82.26 1227 reject_low 46 ALIGNMENT 0 YS2-18i03.q1k chr10 742 62 204213 204212 C 681 0.00 1227 reject_low 39 ALIGNMENT 0 YS2-18i03.q1k chr04 365 926 513965 513964 F 562 0.00 1227 reject_low 35 ALIGNMENT 270 YS2-18i03.q1k chr15 642 972 704063 704393 F 331 96.37 1227 reject_low 5 ALIGNMENT 0 YS2-18i03.q1k chr03 365 990 143027 151744 F 626 0.00 1227 reject_low 28 ALIGNMENT 0 YS2-18i03.q1k chr03 62 258 142921 142920 F 197 0.00 1227 reject_low 28 ALIGNMENT 0 YS2-18i03.q1k chr03 62 642 124131 124130 F 581 0.00 1227 reject_low 32 ALIGNMENT 0 YS2-18i03.q1k chr14 103 62 519492 519491 C 42 0.00 1227 reject_low 22 ALIGNMENT 0 YS2-18i03.q1k chr12 926 365 946868 946867 C 562 0.00 1227 reject_low 37 ALIGNMENT 0 YS2-18i03.q1k chr03 332 62 90520 90519 C 271 0.00 1227 reject_low 34 ALIGNMENT 0 YS2-18i03.q1k chr14 103 62 525058 525057 C 42 0.00 1227 reject_low 43 ALIGNMENT 20 YS2-18i03.q1k chr12 165 104 598994 599058 C 62 82.26 1227 reject_low 21 ALIGNMENT 150 YS2-18i04.q1k chr04 194 30 1362679 1362844 C 165 99.39 235 accept 0 ALIGNMENT 0 YS2-18i04.q1k vc_4 62 194 5831 5830 F 133 0.00 235 reject_low 4 ALIGNMENT 36 YS2-18i04.q1k vc_5 232 197 1 36 C 36 100.00 235 reject_low 7 ALIGNMENT 0 YS2-18i04.q1k vc_7 62 197 13525 13524 F 136 0.00 235 reject_low 6 ALIGNMENT 0 YS2-18i04.q1k vc_1 194 62 2513 2512 C 133 0.00 235 reject_low 1 ALIGNMENT 41 YS2-18i04.q1k vc_4 195 235 5831 5871 F 41 100.00 235 reject_low 4 ALIGNMENT 41 YS2-18i04.q1k vc_2 235 195 2105 2145 C 41 100.00 235 reject_low 2 ALIGNMENT 0 YS2-18i04.q1k vc_5 196 62 5064 5063 C 135 0.00 235 reject_low 5 ALIGNMENT 38 YS2-18i04.q1k vc_7 198 235 13525 13562 F 38 100.00 235 reject_low 6 ALIGNMENT 39 YS2-18i04.q1k vc_5 235 197 5025 5063 C 39 100.00 235 reject_low 5 ALIGNMENT 0 YS2-18i04.q1k vc_5 196 62 37 36 C 135 0.00 235 reject_low 7 ALIGNMENT 0 YS2-18i04.q1k vc_2 194 62 2146 2145 C 133 0.00 235 reject_low 2 ALIGNMENT 0 YS2-18i04.q1k vc_3 194 62 2513 2512 C 133 0.00 235 reject_low 3 ALIGNMENT 41 YS2-18i04.q1k vc_1 235 195 2472 2512 C 41 100.00 235 reject_low 1 ALIGNMENT 0 YS2-18i04.q1k chr04 235 195 1362680 1362679 C 41 0.00 235 accept 0 ALIGNMENT 41 YS2-18i04.q1k vc_3 235 195 2472 2512 C 41 100.00 235 reject_low 3 ALIGNMENT 0 YS2-18i05.q1k vc_2 421 62 2146 2145 C 360 0.00 462 reject_vc 3 ALIGNMENT 0 YS2-18i05.q1k vc_4 62 421 5831 5830 F 360 0.00 462 reject_vc 5 ALIGNMENT 0 YS2-18i05.p1k scplasm1 340 62 937 936 C 279 0.00 435 manual 1 ALIGNMENT 0 YS2-18i05.q1k vc_3 421 62 2513 2512 C 360 0.00 462 reject_vc 4 ALIGNMENT 83 YS2-18i05.p1k scplasm1 42 407 3409 3783 F 366 77.05 435 manual 0 ALIGNMENT 41 YS2-18i05.q1k vc_4 422 462 5831 5871 F 41 100.00 462 reject_vc 5 ALIGNMENT 0 YS2-18i05.q1k vc_5 423 62 5064 5063 C 362 0.00 462 reject_vc 6 ALIGNMENT 41 YS2-18i05.q1k vc_2 462 422 2105 2145 C 41 100.00 462 reject_vc 3 ALIGNMENT 0 YS2-18i05.p1k scplasm1 408 435 3783 3782 F 28 0.00 435 manual 0 ALIGNMENT 0 YS2-18i05.p1k scplasm1 435 408 871 870 C 28 0.00 435 manual 1 ALIGNMENT 0 YS2-18i05.q1k vc_7 62 424 13525 13524 F 363 0.00 462 reject_vc 7 ALIGNMENT 38 YS2-18i05.q1k vc_7 425 462 13525 13562 F 38 100.00 462 reject_vc 7 ALIGNMENT 0 YS2-18i05.q1k vc_5 423 62 37 36 C 362 0.00 462 reject_vc 8 ALIGNMENT 0 YS2-18i05.q1k vc_1 421 62 2513 2512 C 360 0.00 462 reject_vc 2 ALIGNMENT 41 YS2-18i05.q1k vc_3 462 422 2472 2512 C 41 100.00 462 reject_vc 4 ALIGNMENT 47 YS2-18i05.p1k scplasm1 407 341 870 936 C 67 92.54 435 manual 1 ALIGNMENT 41 YS2-18i05.q1k vc_1 462 422 2472 2512 C 41 100.00 462 reject_vc 2 ALIGNMENT 36 YS2-18i05.q1k vc_5 459 424 1 36 C 36 100.00 462 reject_vc 8 ALIGNMENT 39 YS2-18i05.q1k vc_5 462 424 5025 5063 C 39 100.00 462 reject_vc 6 ALIGNMENT 918 YS2-18i06.q1k chr14 1075 31 728014 729079 C 1045 97.22 1350 accept 0 ALIGNMENT 931 YS2-18i06.p1k chr14 32 1110 727771 728856 F 1079 96.94 1448 accept 0 ALIGNMENT 771 YS2-18i07.q1k chr15 1084 39 53181 54213 C 1046 93.31 1269 accept 0 ALIGNMENT 865 YS2-18i07.p1k chr15 35 1054 49103 50132 F 1020 96.27 1347 accept 0 ALIGNMENT 877 YS2-18i08.q1k chr15 1262 50 53013 54213 C 1213 92.66 1375 accept 0 ALIGNMENT 920 YS2-18i08.p1k chr15 37 1161 49108 50242 F 1125 95.64 1445 accept 0 ALIGNMENT 913 YS2-18i09.p1k chr15 29 1106 839190 840287 F 1078 96.94 1379 accept 0 ALIGNMENT 1000 YS2-18i09.q1k chr15 1205 40 840725 841899 C 1166 96.40 1243 accept 0 ALIGNMENT 932 YS2-18i10.p1k chr08 34 1121 401620 402723 F 1088 97.06 1443 accept 0 ALIGNMENT 1001 YS2-18i10.q1k chr08 1240 39 404936 406145 C 1202 96.01 1266 accept 0 ALIGNMENT 980 YS2-18i11.p1k chr07 30 1249 767259 768496 F 1220 94.92 1490 accept 0 ALIGNMENT 962 YS2-18i11.q1k chr07 1260 33 771802 773017 C 1228 94.38 1260 accept 0 ALIGNMENT 0 YS2-18i12.q1k vc_4 748 747 5872 6353 F 0 0.00 1272 reject_low 9 ALIGNMENT 41 YS2-18i12.q1k vc_2 747 707 2105 2145 C 41 100.00 1272 reject_low 12 ALIGNMENT 41 YS2-18i12.q1k vc_3 747 707 2472 2512 C 41 100.00 1272 reject_low 13 ALIGNMENT 0 YS2-18i12.p1k chr14 732 714 246993 246992 C 19 0.00 732 accept_chi 0 ALIGNMENT 0 YS2-18i12.q1k vc_5 62 746 2398 2397 F 685 0.00 1272 reject_low 4 ALIGNMENT 36 YS2-18i12.q1k vc_5 744 709 1 36 C 36 100.00 1272 reject_low 17 ALIGNMENT 155 YS2-18i12.q1k vc_4 747 908 6353 6514 F 162 98.77 1272|1,0 reject_low 9 ALIGNMENT 41 YS2-18i12.q1k vc_1 747 707 2472 2512 C 41 100.00 1272 reject_low 11 ALIGNMENT 0 YS2-18i12.q1k vc_3 706 62 2513 2512 C 645 0.00 1272 reject_low 13 ALIGNMENT 41 YS2-18i12.q1k vc_4 707 747 5831 5871 F 41 100.00 1272 reject_low 9 ALIGNMENT 293 YS2-18i12.q1k vc_3 747 1169 2531 2963 F 423 91.02 1272 reject_low 7 ALIGNMENT 38 YS2-18i12.q1k vc_7 710 747 13525 13562 F 38 100.00 1272 reject_low 16 ALIGNMENT 0 YS2-18i12.q1k vc_3 824 748 2473 2472 C 77 0.00 1272 reject_low 13 ALIGNMENT 0 YS2-18i12.q1k vc_5 824 748 5026 5025 C 77 0.00 1272 reject_low 14 ALIGNMENT 0 YS2-18i12.q1k vc_3 62 746 2531 2530 F 685 0.00 1272 reject_low 7 ALIGNMENT 0 YS2-18i12.q1k vc_5 708 62 37 36 C 647 0.00 1272 reject_low 17 ALIGNMENT 0 YS2-18i12.q1k vc_4 62 706 5831 5830 F 645 0.00 1272 reject_low 9 ALIGNMENT 0 YS2-18i12.q1k vc_7 62 709 63 62 F 648 0.00 1272 reject_low 15 ALIGNMENT 0 YS2-18i12.q1k vc_7 906 62 6412 6411 C 845 0.00 1272 reject_low 18 ALIGNMENT 0 YS2-18i12.q1k vc_7 748 824 13562 13561 F 77 0.00 1272 reject_low 16 ALIGNMENT 38 YS2-18i12.q1k vc_7 710 747 63 100 F 38 100.00 1272 reject_low 15 ALIGNMENT 39 YS2-18i12.q1k vc_5 747 709 5025 5063 C 39 100.00 1272 reject_low 14 ALIGNMENT 0 YS2-18i12.q1k vc_1 824 748 2473 2472 C 77 0.00 1272 reject_low 11 ALIGNMENT 292 YS2-18i12.q1k vc_4 1259 747 5279 5812 C 513 87.13 1272 reject_low 3 ALIGNMENT 0 YS2-18i12.q1k vc_2 824 748 2106 2105 C 77 0.00 1272 reject_low 12 ALIGNMENT 293 YS2-18i12.q1k vc_2 747 1169 2164 2596 F 423 91.02 1272 reject_low 6 ALIGNMENT 87 YS2-18i12.q1k vc_4 835 747 1446 1534 C 89 100.00 1272 reject_low 10 ALIGNMENT 0 YS2-18i12.q1k vc_4 62 746 126 125 F 685 0.00 1272 reject_low 8 ALIGNMENT 0 YS2-18i12.q1k vc_7 748 824 100 99 F 77 0.00 1272 reject_low 15 ALIGNMENT 665 YS2-18i12.p1k chr14 713 28 246992 247677 C 686 99.71 732 accept_chi 0 ALIGNMENT 47 YS2-18i12.q1k vc_7 958 907 6360 6411 C 52 96.15 1272|1,0 reject_low 18 ALIGNMENT 663 YS2-18i12.q1k chr14 27 711 246992 247677 F 685 99.71 1272 accept_chi 1 ALIGNMENT 90 YS2-18i12.q1k vc_7 1169 957 4950 5172 C 213 83.10 1272|0,1 reject_low 18 ALIGNMENT 0 YS2-18i12.q1k vc_7 746 62 2728 2727 C 685 0.00 1272 reject_low 2 ALIGNMENT 0 YS2-18i12.q1k vc_7 62 709 13525 13524 F 648 0.00 1272 reject_low 16 ALIGNMENT 0 YS2-18i12.q1k vc_1 706 62 2513 2512 C 645 0.00 1272 reject_low 11 ALIGNMENT 155 YS2-18i12.q1k vc_4 747 908 126 287 F 162 98.77 1272 reject_low 8 ALIGNMENT 298 YS2-18i12.q1k vc_5 747 1245 2398 2913 F 499 87.98 1272 reject_low 4 ALIGNMENT 293 YS2-18i12.q1k vc_1 747 1169 2531 2963 F 423 91.02 1272 reject_low 5 ALIGNMENT 0 YS2-18i12.q1k vc_2 62 746 2164 2163 F 685 0.00 1272 reject_low 6 ALIGNMENT 0 YS2-18i12.q1k vc_4 746 62 5813 5812 C 685 0.00 1272 reject_low 3 ALIGNMENT 0 YS2-18i12.q1k vc_4 746 62 1535 1534 C 685 0.00 1272 reject_low 10 ALIGNMENT 0 YS2-18i12.q1k vc_2 706 62 2146 2145 C 645 0.00 1272 reject_low 12 ALIGNMENT 0 YS2-18i12.q1k vc_7 957 958 5172 6360 C 0 0.00 1272 reject_low 18 ALIGNMENT 0 YS2-18i12.q1k vc_1 62 746 2531 2530 F 685 0.00 1272 reject_low 5 ALIGNMENT 299 YS2-18i12.q1k vc_7 1259 747 2196 2727 C 513 87.52 1272 reject_low 2 ALIGNMENT 0 YS2-18i12.q1k vc_5 708 62 5064 5063 C 647 0.00 1272 reject_low 14 ALIGNMENT 0 YS2-18i12.q1k vc_5 824 745 2 1 C 80 0.00 1272 reject_low 17 ALIGNMENT 0 YS2-18i12.q1k chr14 712 824 247677 247676 F 113 0.00 1272 accept_chi 1 ALIGNMENT 0 YS2-18i13.q1k chr12 203 839 41259 41258 F 637 0.00 1257 reject_low 2 ALIGNMENT 23 YS2-18i13.q1k chr13 167 206 388684 388723 F 40 95.00 1257 reject_low 1 ALIGNMENT 0 YS2-18i13.q1k chr13 207 839 388723 388722 F 633 0.00 1257 reject_low 1 ALIGNMENT 870 YS2-18i13.q1k chr12 1051 33 40381 41388 C 1019 97.15 1257 accept 0 ALIGNMENT 0 YS2-18i13.q1k chr12 62 157 41215 41214 F 96 0.00 1257 reject_low 2 ALIGNMENT 953 YS2-18i13.p1k chr12 30 1070 40174 41220 F 1041 98.17 1418 accept 0 ALIGNMENT 21 YS2-18i13.q1k chr12 158 202 41215 41259 F 45 95.56 1257 reject_low 2 ALIGNMENT 20 YS2-18i13.q1k chr02 202 169 40581 40614 C 34 100.00 1257 reject_low 3 ALIGNMENT 0 YS2-18i13.q1k chr02 839 203 40582 40581 C 637 0.00 1257 reject_low 3 ALIGNMENT 0 YS2-18i13.q1k chr02 168 62 40615 40614 C 107 0.00 1257 reject_low 3 ALIGNMENT 0 YS2-18i13.q1k chr13 62 166 388684 388683 F 105 0.00 1257 reject_low 1 ALIGNMENT 0 YS2-18i14.q1k chrm 317 62 72830 72829 C 256 0.00 1251 reject_low 3 ALIGNMENT 0 YS2-18i14.q1k chrm 356 866 65731 65730 F 511 0.00 1251 reject_low 4 ALIGNMENT 0 YS2-18i14.q1k chrm 866 356 72793 72792 C 511 0.00 1251 reject_low 3 ALIGNMENT 0 YS2-18i14.q1k chrm 62 317 65693 65692 F 256 0.00 1251 reject_low 4 ALIGNMENT 317 YS2-18i14.q1k chrm 672 1198 25183 25711 F 527 91.08 1251 reject_bad_break 0 ALIGNMENT 0 YS2-18i14.q1k chrm 866 356 6193 6192 C 511 0.00 1251 reject_low 1 ALIGNMENT 697 YS2-18i14.p1k chrm 1204 38 25809 26964 C 1167 92.29 1493 reject_bad_break 0 ALIGNMENT 0 YS2-18i14.q1k chrm 62 317 55425 55424 F 256 0.00 1251 reject_low 2 ALIGNMENT 30 YS2-18i14.q1k chrm 318 355 55425 55462 F 38 97.37 1251 reject_low 2 ALIGNMENT 32 YS2-18i14.q1k chrm 355 317 6192 6230 C 39 97.44 1251 reject_low 1 ALIGNMENT 30 YS2-18i14.q1k chrm 355 318 72792 72829 C 38 97.37 1251 reject_low 3 ALIGNMENT 26 YS2-18i14.q1k chrm 318 355 65693 65731 F 38 94.74 1251 reject_low 4 ALIGNMENT 510 YS2-18i14.q1k chrm 30 634 24580 25184 F 605 99.34 1251 reject_bad_break 0 ALIGNMENT 0 YS2-18i14.q1k chrm 356 866 55462 55461 F 511 0.00 1251 reject_low 2 ALIGNMENT 0 YS2-18i14.q1k chrm 316 62 6231 6230 C 255 0.00 1251 reject_low 1 ALIGNMENT 0 YS2-18i14.q1k chrm 635 671 25185 25182 F 37 0.00 1251 reject_bad_break 0 ALIGNMENT 884 YS2-18i16.p1k chr04 1008 31 1141315 1142306 C 978 98.16 1346 accept 0 ALIGNMENT 980 YS2-18i16.q1k chr04 28 1145 1137698 1138818 F 1118 96.87 1282 accept 0 ALIGNMENT 1014 YS2-18i17.q1k chr04 30 1199 1255514 1256690 F 1170 96.75 1225 accept 0 ALIGNMENT 0 YS2-18i17.p1k chr07 813 95 709109 709108 C 719 0.00 1420 reject_low 3 ALIGNMENT 0 YS2-18i17.p1k chr09 891 95 207205 207204 C 797 0.00 1420 reject_low 9 ALIGNMENT 0 YS2-18i17.p1k chr07 735 95 709031 709030 C 641 0.00 1420 reject_low 6 ALIGNMENT 0 YS2-18i17.p1k chr09 735 95 207049 207048 C 641 0.00 1420 reject_low 7 ALIGNMENT 20 YS2-18i17.p1k chr09 964 892 207130 207204 C 73 76.71 1420 reject_low 9 ALIGNMENT 20 YS2-18i17.p1k chr07 964 892 709034 709108 C 73 76.71 1420 reject_low 8 ALIGNMENT 0 YS2-18i17.p1k chr07 891 95 709109 709108 C 797 0.00 1420 reject_low 8 ALIGNMENT 95 YS2-18i17.p1k chr09 886 736 206976 207126 C 151 87.42 1420 reject_low 4 ALIGNMENT 26 YS2-18i17.p1k chr09 810 736 206974 207048 C 75 78.67 1420 reject_low 7 ALIGNMENT 89 YS2-18i17.p1k chr09 964 814 207052 207204 C 151 86.09 1420 reject_low 5 ALIGNMENT 0 YS2-18i17.p1k chr09 813 95 207205 207204 C 719 0.00 1420 reject_low 5 ALIGNMENT 1039 YS2-18i17.p1k chr09 1227 34 206706 207906 C 1194 96.23 1420 ambiguous_trans 1 ALIGNMENT 258 YS2-18i17.p1k chr07 1227 814 708688 709108 C 414 87.92 1420 reject_low 3 ALIGNMENT 26 YS2-18i17.p1k chr07 810 736 708956 709030 C 75 78.67 1420 reject_low 6 ALIGNMENT 808 YS2-18i17.p1k chr07 886 34 708958 709810 C 853 98.71 1420 reject_low 2 ALIGNMENT 0 YS2-18i17.p1k chr09 735 95 207127 207126 C 641 0.00 1420 reject_low 4 ALIGNMENT 251 YS2-18i18.p1k vc_7 711 1042 13562 13910 F 332 93.37 1423 reject_vc 6 ALIGNMENT 0 YS2-18i18.p1k vc_1 710 62 2106 2105 C 649 0.00 1423 reject_vc 0 ALIGNMENT 26 YS2-18i18.p1k vc_1 741 711 2441 2472 C 31 96.77 1423 reject_low 7 ALIGNMENT 0 YS2-18i18.p1k vc_4 62 710 5871 5870 F 649 0.00 1423 reject_vc 3 ALIGNMENT 0 YS2-18i18.p1k vc_3 890 742 2442 2441 C 149 0.00 1423 reject_low 8 ALIGNMENT 0 YS2-18i18.p1k vc_1 710 62 2473 2472 C 649 0.00 1423 reject_low 7 ALIGNMENT 0 YS2-18i18.p1k vc_5 710 62 5026 5025 C 649 0.00 1423 reject_vc 4 ALIGNMENT 251 YS2-18i18.p1k vc_7 711 1042 100 448 F 332 93.37 1423 reject_vc 5 ALIGNMENT 251 YS2-18i18.p1k vc_5 1042 711 4677 5025 C 332 93.37 1423 reject_vc 4 ALIGNMENT 0 YS2-18i18.p1k vc_3 710 62 2473 2472 C 649 0.00 1423 reject_low 8 ALIGNMENT 0 YS2-18i18.p1k vc_3 710 62 2106 2105 C 649 0.00 1423 reject_vc 2 ALIGNMENT 0 YS2-18i18.p1k vc_7 62 710 13562 13561 F 649 0.00 1423 reject_vc 6 ALIGNMENT 251 YS2-18i18.p1k vc_1 1042 711 1757 2105 C 332 93.37 1423 reject_vc 0 ALIGNMENT 26 YS2-18i18.p1k vc_3 741 711 2441 2472 C 31 96.77 1423 reject_low 8 ALIGNMENT 251 YS2-18i18.p1k vc_2 1042 711 1757 2105 C 332 93.37 1423 reject_vc 1 ALIGNMENT 0 YS2-18i18.p1k vc_7 62 710 100 99 F 649 0.00 1423 reject_vc 5 ALIGNMENT 0 YS2-18i18.p1k vc_1 890 742 2442 2441 C 149 0.00 1423 reject_low 7 ALIGNMENT 251 YS2-18i18.p1k vc_3 1042 711 1757 2105 C 332 93.37 1423 reject_vc 2 ALIGNMENT 251 YS2-18i18.p1k vc_4 711 1042 5871 6219 F 332 93.37 1423 reject_vc 3 ALIGNMENT 0 YS2-18i18.p1k vc_2 710 62 2106 2105 C 649 0.00 1423 reject_vc 1 ALIGNMENT 65 YS2-18i20.p1k chr16 854 1153 855897 856199 F 300 74.67 1453 ambiguous_trans 24 ALIGNMENT 940 YS2-18i20.q1k chr05 40 1220 432991 434178 F 1181 95.00 1222 accept 0 ALIGNMENT 939 YS2-18i20.p1k chr04 31 1153 518173 519298 F 1123 95.37 1453 ambiguous_trans 12 ALIGNMENT 945 YS2-18i20.p1k chr03 1153 31 85155 86280 C 1123 95.55 1453 ambiguous_trans 11 ALIGNMENT 0 YS2-18i20.p1k chr16 853 62 57105 57104 C 792 0.00 1453 ambiguous_trans 21 ALIGNMENT 0 YS2-18i20.p1k chr02 853 62 260224 260223 C 792 0.00 1453 ambiguous_trans 14 ALIGNMENT 0 YS2-18i20.p1k chr16 62 853 809909 809908 F 792 0.00 1453 ambiguous_trans 22 ALIGNMENT 950 YS2-18i20.p1k chr07 1184 31 811763 812922 C 1154 94.97 1453 ambiguous_trans 7 ALIGNMENT 0 YS2-18i20.p1k chr16 617 62 845310 845309 C 556 0.00 1453 ambiguous_trans 23 ALIGNMENT 0 YS2-18i20.p1k chr16 674 853 855705 855896 F 180 0.00 1453 ambiguous_trans 24 ALIGNMENT 21 YS2-18i20.p1k chr16 618 673 855649 855704 F 56 80.36 1453 ambiguous_trans 24 ALIGNMENT 983 YS2-18i20.p1k chr04 1184 31 872127 873286 C 1154 95.93 1453 ambiguous_trans 3 ALIGNMENT 944 YS2-18i20.p1k chr12 1184 31 941500 942659 C 1154 94.80 1453 ambiguous_trans 9 ALIGNMENT 961 YS2-18i20.p1k chr04 1184 31 981476 982635 C 1154 95.41 1453 ambiguous_trans 4 ALIGNMENT 21 YS2-18i20.p1k chr16 673 618 845254 845309 C 56 80.36 1453 ambiguous_trans 23 ALIGNMENT 969 YS2-18i20.p1k chr15 1153 31 970627 971752 C 1123 96.26 1453 ambiguous_trans 8 ALIGNMENT 986 YS2-18i20.p1k chr12 31 1184 980226 981385 F 1154 96.01 1453 ambiguous_trans 2 ALIGNMENT 950 YS2-18i20.p1k chr06 1184 31 138219 139378 C 1154 94.97 1453 ambiguous_trans 6 ALIGNMENT 941 YS2-18i20.p1k chr07 31 1184 573234 574393 F 1154 94.71 1453 ambiguous_trans 10 ALIGNMENT 65 YS2-18i20.p1k chr04 854 1153 991987 992289 F 300 74.67 1453 ambiguous_trans 20 ALIGNMENT 933 YS2-18i20.p1k chr14 31 1153 566522 567647 F 1123 95.19 1453 ambiguous_trans 13 ALIGNMENT 986 YS2-18i20.p1k chr02 1184 31 29952 31111 C 1154 96.01 1453 ambiguous_trans 1 ALIGNMENT 71 YS2-18i20.p1k chr04 854 1153 883566 883868 F 300 75.00 1453 ambiguous_trans 16 ALIGNMENT 0 YS2-18i20.p1k chr15 853 62 595469 595468 C 792 0.00 1453 ambiguous_trans 19 ALIGNMENT 0 YS2-18i20.p1k chr04 62 853 991987 991986 F 792 0.00 1453 ambiguous_trans 20 ALIGNMENT 71 YS2-18i20.p1k chr13 1153 854 184515 184817 C 300 74.00 1453 ambiguous_trans 18 ALIGNMENT 71 YS2-18i20.p1k chr07 854 1153 567115 567417 F 300 75.00 1453 ambiguous_trans 17 ALIGNMENT 71 YS2-18i20.p1k chr02 1153 854 259921 260223 C 300 74.00 1453 ambiguous_trans 14 ALIGNMENT 71 YS2-18i20.p1k chr15 1153 854 595166 595468 C 300 74.00 1453 ambiguous_trans 19 ALIGNMENT 0 YS2-18i20.p1k chr04 62 853 650765 650764 F 792 0.00 1453 ambiguous_trans 15 ALIGNMENT 0 YS2-18i20.p1k chr16 62 617 855649 855648 F 556 0.00 1453 ambiguous_trans 24 ALIGNMENT 71 YS2-18i20.p1k chr16 1153 854 844759 845061 C 300 74.00 1453 ambiguous_trans 23 ALIGNMENT 0 YS2-18i20.p1k chr13 853 62 184818 184817 C 792 0.00 1453 ambiguous_trans 18 ALIGNMENT 0 YS2-18i20.p1k chr16 853 674 845062 845253 C 180 0.00 1453 ambiguous_trans 23 ALIGNMENT 0 YS2-18i20.p1k chr04 62 853 883566 883565 F 792 0.00 1453 ambiguous_trans 16 ALIGNMENT 71 YS2-18i20.p1k chr04 854 1153 650765 651067 F 300 75.00 1453 ambiguous_trans 15 ALIGNMENT 65 YS2-18i20.p1k chr16 1153 854 56802 57104 C 300 73.33 1453 ambiguous_trans 21 ALIGNMENT 0 YS2-18i20.p1k chr07 62 853 567115 567114 F 792 0.00 1453 ambiguous_trans 17 ALIGNMENT 48 YS2-18i20.p1k chr16 854 1153 809909 810211 F 300 73.00 1453 ambiguous_trans 22 ALIGNMENT 984 YS2-18i20.p1k chr15 31 1153 708553 709678 F 1123 96.71 1453 ambiguous_trans 5 ALIGNMENT 38 YS2-18i22.q1k vc_7 557 594 13525 13562 F 38 100.00 594 reject_low 7 ALIGNMENT 40 YS2-18i22.q1k vc_2 594 555 2105 2144 C 40 100.00 594 reject_low 3 ALIGNMENT 36 YS2-18i22.q1k vc_5 591 556 1 36 C 36 100.00 594 reject_low 8 ALIGNMENT 39 YS2-18i22.q1k vc_5 594 556 5025 5063 C 39 100.00 594 reject_low 6 ALIGNMENT 0 YS2-18i22.q1k vc_5 555 62 5064 5063 C 494 0.00 594 reject_low 6 ALIGNMENT 500 YS2-18i22.q1k chr02 40 555 729585 730100 F 516 100.00 594 accept_chi 1 ALIGNMENT 0 YS2-18i22.q1k vc_7 62 556 13525 13524 F 495 0.00 594 reject_low 7 ALIGNMENT 0 YS2-18i22.q1k vc_4 62 554 5832 5831 F 493 0.00 594 reject_low 5 ALIGNMENT 0 YS2-18i22.p1k chr02 571 553 729586 729585 C 19 0.00 571 accept_chi 0 ALIGNMENT 40 YS2-18i22.q1k vc_4 555 594 5832 5871 F 40 100.00 594 reject_low 5 ALIGNMENT 0 YS2-18i22.q1k vc_3 554 62 2512 2511 C 493 0.00 594 reject_low 4 ALIGNMENT 40 YS2-18i22.q1k vc_1 594 555 2472 2511 C 40 100.00 594 reject_low 2 ALIGNMENT 0 YS2-18i22.q1k chr02 556 594 730100 730099 F 39 0.00 594 accept_chi 1 ALIGNMENT 0 YS2-18i22.q1k vc_2 554 62 2145 2144 C 493 0.00 594 reject_low 3 ALIGNMENT 500 YS2-18i22.p1k chr02 552 37 729585 730100 C 516 100.00 571 accept_chi 0 ALIGNMENT 40 YS2-18i22.q1k vc_3 594 555 2472 2511 C 40 100.00 594 reject_low 4 ALIGNMENT 0 YS2-18i22.q1k vc_5 555 62 37 36 C 494 0.00 594 reject_low 8 ALIGNMENT 0 YS2-18i22.q1k vc_1 554 62 2512 2511 C 493 0.00 594 reject_low 2 ALIGNMENT 41 YS2-18i23.q1k vc_3 418 378 2472 2512 C 41 100.00 418 reject_low 3 ALIGNMENT 39 YS2-18i23.q1k vc_5 418 380 5025 5063 C 39 100.00 418 reject_low 5 ALIGNMENT 284 YS2-18i23.q1k chr05 372 34 243786 244125 C 339 95.28 418 accept_chi 1 ALIGNMENT 0 YS2-18i23.q1k vc_1 377 96 2513 2512 C 282 0.00 418 reject_low 2 ALIGNMENT 38 YS2-18i23.q1k vc_7 381 418 13525 13562 F 38 100.00 418 reject_low 6 ALIGNMENT 36 YS2-18i23.q1k vc_5 415 380 1 36 C 36 100.00 418 reject_low 7 ALIGNMENT 0 YS2-18i23.q1k vc_7 96 380 13525 13524 F 285 0.00 418 reject_low 6 ALIGNMENT 0 YS2-18i23.q1k vc_5 379 96 5064 5063 C 284 0.00 418 reject_low 5 ALIGNMENT 41 YS2-18i23.q1k vc_1 418 378 2472 2512 C 41 100.00 418 reject_low 2 ALIGNMENT 41 YS2-18i23.q1k vc_4 378 418 5831 5871 F 41 100.00 418 reject_low 4 ALIGNMENT 0 YS2-18i23.p1k chr05 404 418 244125 244124 F 15 0.00 418 accept_chi 0 ALIGNMENT 0 YS2-18i23.q1k vc_4 96 377 5831 5830 F 282 0.00 418 reject_low 4 ALIGNMENT 287 YS2-18i23.p1k chr05 66 403 243786 244125 F 338 95.86 418 accept_chi 0 ALIGNMENT 0 YS2-18i23.q1k vc_5 379 96 37 36 C 284 0.00 418 reject_low 7 ALIGNMENT 0 YS2-18i23.q1k vc_3 377 96 2513 2512 C 282 0.00 418 reject_low 3 ALIGNMENT 0 YS2-18i23.q1k chr05 418 373 243787 243786 C 46 0.00 418 accept_chi 1 ALIGNMENT 922 YS2-18i24.q1k chr15 37 1064 863947 864974 F 1028 97.08 1365 accept 0 ALIGNMENT 899 YS2-18i24.p1k chr15 1025 32 867048 868055 C 994 98.09 1295 accept 0 ALIGNMENT 0 YS2-18i24.p1k chr13 883 506 732874 732873 C 378 0.00 1295 reject_low 1 ALIGNMENT 214 YS2-18i24.p1k chr13 505 237 732873 733141 C 269 94.05 1295 reject_low 1 ALIGNMENT 0 YS2-18i24.p1k chr13 236 62 733142 733141 C 175 0.00 1295 reject_low 1 ALIGNMENT 0 YS2-18j01.q1k chr07 250 210 621545 621544 C 41 0.00 250 accept 0 ALIGNMENT 0 YS2-18j01.q1k vc_1 209 62 2513 2512 C 148 0.00 250 reject_low 1 ALIGNMENT 41 YS2-18j01.q1k vc_4 210 250 5831 5871 F 41 100.00 250 reject_low 3 ALIGNMENT 0 YS2-18j01.q1k vc_5 211 62 5064 5063 C 150 0.00 250 reject_low 4 ALIGNMENT 39 YS2-18j01.q1k vc_5 250 212 5025 5063 C 39 100.00 250 reject_low 4 ALIGNMENT 0 YS2-18j01.q1k vc_7 62 212 13525 13524 F 151 0.00 250 reject_low 5 ALIGNMENT 0 YS2-18j01.q1k vc_4 62 209 5831 5830 F 148 0.00 250 reject_low 3 ALIGNMENT 38 YS2-18j01.q1k vc_7 213 250 13525 13562 F 38 100.00 250 reject_low 5 ALIGNMENT 41 YS2-18j01.q1k vc_3 250 210 2472 2512 C 41 100.00 250 reject_low 2 ALIGNMENT 41 YS2-18j01.q1k vc_1 250 210 2472 2512 C 41 100.00 250 reject_low 1 ALIGNMENT 0 YS2-18j01.q1k vc_3 209 62 2513 2512 C 148 0.00 250 reject_low 2 ALIGNMENT 0 YS2-18j01.q1k vc_5 211 62 37 36 C 150 0.00 250 reject_low 6 ALIGNMENT 36 YS2-18j01.q1k vc_5 247 212 1 36 C 36 100.00 250 reject_low 6 ALIGNMENT 173 YS2-18j01.q1k chr07 209 32 621544 621722 C 178 99.44 250 accept 0 ALIGNMENT 955 YS2-18j02.p1k chr15 35 1135 693029 694147 F 1101 96.91 1404 accept 0 ALIGNMENT 1029 YS2-18j02.q1k chr15 1171 27 695191 696336 C 1145 97.38 1173 accept 0 ALIGNMENT 898 YS2-18j04.p1k chr11 1106 33 181726 182825 C 1074 96.28 1392 accept 0 ALIGNMENT 996 YS2-18j04.q1k chr11 40 1188 180670 181824 F 1149 95.91 1313 accept 0 ALIGNMENT 993 YS2-18j05.p1k chr08 32 1143 99212 100342 F 1112 97.30 1435 accept 0 ALIGNMENT 946 YS2-18j05.q1k chr08 1147 40 103054 104168 C 1108 95.22 1394 accept 0 ALIGNMENT 32 YS2-18j06.q1k chrm 836 773 52771 52835 C 64 85.94 1368 reject_low 40,42 ALIGNMENT 592 YS2-18j06.q1k chrm 1000 29 10215 11180 C 972 93.93 1368 reject_bad_break 0 ALIGNMENT 0 YS2-18j06.q1k chrm 62 88 2716 2715 F 27 0.00 1368 reject_low 7,9,11,33 ALIGNMENT 0 YS2-18j06.q1k chrm 792 568 69357 69356 C 225 0.00 1368 reject_low 1 ALIGNMENT 26 YS2-18j06.p1k chrm 433 390 77672 77715 C 44 88.64 1466 reject_low 32 ALIGNMENT 0 YS2-18j06.q1k chrm 439 62 52815 52814 C 378 0.00 1368 reject_low 29 ALIGNMENT 0 YS2-18j06.q1k chrm 777 485 69502 76592 C 293 0.00 1368 reject_low 45 ALIGNMENT 0 YS2-18j06.q1k chrm 792 167 34284 34283 C 626 0.00 1368 reject_low 28 ALIGNMENT 0 YS2-18j06.q1k chrm 179 792 52390 52389 F 614 0.00 1368 reject_low 14,15 ALIGNMENT 40 YS2-18j06.q1k chrm 482 426 3060 3117 C 57 91.23 1368 reject_low 43 ALIGNMENT 0 YS2-18j06.q1k chrm 424 62 69502 69501 C 363 0.00 1368 reject_low 1 ALIGNMENT 43 YS2-18j06.q1k chrm 166 121 34283 34328 C 46 100.00 1368 reject_low 28 ALIGNMENT 0 YS2-18j06.q1k chrm 62 120 33449 33448 F 59 0.00 1368 reject_low 3,4 ALIGNMENT 38 YS2-18j06.q1k chrm 484 440 34285 34329 C 45 97.78 1368 reject_low 24 ALIGNMENT 0 YS2-18j06.q1k chrm 171 792 12318 12317 F 622 0.00 1368 reject_low 22 ALIGNMENT 38 YS2-18j06.p1k chrm 434 680 9862 10111 F 247 76.11 1466|6,0 reject_bad_break 0 reject_low 37 ALIGNMENT 59 YS2-18j06.q1k chrm 183 112 76573 76645 C 72 94.44 1368 reject_low 2,6 ALIGNMENT 0 YS2-18j06.q1k chrm 440 62 34977 34976 C 379 0.00 1368 reject_low 26 ALIGNMENT 0 YS2-18j06.q1k chrm 62 110 12259 12258 F 49 0.00 1368 reject_low 22 ALIGNMENT 37 YS2-18j06.q1k chrm 164 121 10744 10787 C 44 97.73 1368 reject_low 37,43 ALIGNMENT 37 YS2-18j06.q1k chrm 484 441 34933 34976 C 44 97.73 1368 reject_low 26 ALIGNMENT 0 YS2-18j06.q1k chrm 120 62 77714 77713 C 59 0.00 1368 reject_low 44,45 ALIGNMENT 0 YS2-18j06.q1k chrm 792 184 76574 76573 C 609 0.00 1368 reject_low 2,6 ALIGNMENT 0 YS2-18j06.p1k chrm 349 125 80586 81403 C 225 0.00 1466 reject_low 38 ALIGNMENT 38 YS2-18j06.q1k chrm 845 776 53816 53885 C 70 87.14 1368 reject_low 13 ALIGNMENT 0 YS2-18j06.q1k chrm 62 439 52331 52330 F 378 0.00 1368 reject_low 18 ALIGNMENT 33 YS2-18j06.p1k chrm 388 431 81 124 F 44 93.18 1466 reject_low 16 ALIGNMENT 32 YS2-18j06.p1k chrm 433 390 11506 11549 C 44 93.18 1466 reject_low 7 ALIGNMENT 41 YS2-18j06.p1k chrm 376 445 9473 9544 F 70 87.14 1466|0,6 reject_low 37 ALIGNMENT 45 YS2-18j06.q1k chrm 121 178 52332 52390 F 58 93.10 1368 reject_low 14,15 ALIGNMENT 0 YS2-18j06.q1k chrm 120 62 52814 52813 C 59 0.00 1368 reject_low 27 ALIGNMENT 0 YS2-18j06.p1k chrm 440 439 9539 9867 F 0 0.00 1466 reject_low 37 ALIGNMENT 0 YS2-18j06.q1k chrm 62 439 12268 12267 F 378 0.00 1368 reject_low 17 ALIGNMENT 0 YS2-18j06.q1k chrm 792 485 34286 34285 C 308 0.00 1368 reject_low 24 ALIGNMENT 41 YS2-18j06.q1k chrm 835 769 34287 34353 C 67 89.55 1368 reject_low 36 ALIGNMENT 0 YS2-18j06.p1k chrm 389 152 11550 11549 C 238 0.00 1466 reject_low 7 ALIGNMENT 0 YS2-18j06.q1k chrm 184 792 33509 33508 F 609 0.00 1368 reject_low 3,4 ALIGNMENT 37 YS2-18j06.q1k chrm 483 440 77671 77714 C 44 97.73 1368 reject_low 41 ALIGNMENT 0 YS2-18j06.p1k chrm 331 137 2195 11492 C 195 0.00 1466 reject_low 34 ALIGNMENT 33 YS2-18j06.q1k chrm 481 440 53828 53869 C 42 97.62 1368 reject_low 42 ALIGNMENT 36 YS2-18j06.p1k chrm 458 392 48076 48143 C 67 85.07 1466 reject_low 4 ALIGNMENT 46 YS2-18j06.q1k chrm 440 500 12268 12327 F 61 95.08 1368 reject_low 17 ALIGNMENT 0 YS2-18j06.q1k chrm 792 485 69053 69052 C 308 0.00 1368 reject_low 44 ALIGNMENT 38 YS2-18j06.q1k chrm 173 121 77661 77713 C 53 90.57 1368 reject_low 44,45 ALIGNMENT 0 YS2-18j06.p1k chrm 377 152 81459 81458 C 226 0.00 1466 reject_low 21 ALIGNMENT 39 YS2-18j06.p1k chrm 81 131 71212 71262 F 51 92.16 1466 reject_low 2 ALIGNMENT 0 YS2-18j06.q1k chrm 485 792 33491 33490 F 308 0.00 1368 reject_low 30 ALIGNMENT 0 YS2-18j06.q1k chrm 792 485 34934 34933 C 308 0.00 1368 reject_low 26 ALIGNMENT 33 YS2-18j06.q1k chrm 482 441 66827 66868 C 42 97.62 1368 reject_low 39 ALIGNMENT 32 YS2-18j06.q1k chrm 162 121 10394 10434 C 42 97.62 1368 reject_low 31 ALIGNMENT 0 YS2-18j06.q1k chrm 423 165 10452 10743 C 259 0.00 1368 reject_low 37 ALIGNMENT 0 YS2-18j06.q1k chrm 425 165 3118 10743 C 261 0.00 1368 reject_low 43 ALIGNMENT 51 YS2-18j06.q1k chrm 178 112 66810 66877 C 67 92.54 1368 reject_low 5,8 ALIGNMENT 32 YS2-18j06.p1k chrm 447 332 2080 2194 C 116 81.90 1466 reject_low 34,35 ALIGNMENT 36 YS2-18j06.p1k chrm 80 130 82 132 F 51 90.20 1466 reject_low 37 ALIGNMENT 0 YS2-18j06.q1k chrm 772 168 52836 53822 C 605 0.00 1368 reject_low 40 ALIGNMENT 0 YS2-18j06.q1k chrm 120 62 10788 10787 C 59 0.00 1368 reject_low 37,43 ALIGNMENT 0 YS2-18j06.q1k chrm 768 172 34354 34925 C 597 0.00 1368 reject_low 36 ALIGNMENT 43 YS2-18j06.p1k chrm 136 79 11035 11092 C 58 91.38 1466 reject_low 33 ALIGNMENT 0 YS2-18j06.p1k chrm 390 152 10789 10788 C 239 0.00 1466 reject_low 11 ALIGNMENT 0 YS2-18j06.p1k chrm 133 397 52382 52381 F 265 0.00 1466 reject_low 5 ALIGNMENT 0 YS2-18j06.q1k chrm 439 62 53870 53869 C 378 0.00 1368 reject_low 42 ALIGNMENT 0 YS2-18j06.q1k chrm 88 62 35008 35007 C 27 0.00 1368 reject_low 36 ALIGNMENT 0 YS2-18j06.q1k chrm 62 782 52321 52320 F 721 0.00 1368 reject_low 19 ALIGNMENT 41 YS2-18j06.q1k chrm 173 121 52762 52813 C 53 94.34 1368 reject_low 27 ALIGNMENT 38 YS2-18j06.q1k chrm 484 440 76593 76637 C 45 97.78 1368 reject_low 45 ALIGNMENT 0 YS2-18j06.q1k chrm 174 792 2804 2803 F 619 0.00 1368 reject_low 7,9,11,33 ALIGNMENT 38 YS2-18j06.p1k chrm 442 390 52763 52815 C 53 90.57 1466 reject_low 15 ALIGNMENT 0 YS2-18j06.p1k chrm 391 152 48144 48143 C 240 0.00 1466 reject_low 4 ALIGNMENT 0 YS2-18j06.q1k chrm 792 485 11046 11045 C 308 0.00 1368 reject_low 25 ALIGNMENT 23 YS2-18j06.q1k chrm 711 835 2667 2793 F 125 77.60 1368 reject_low 12 ALIGNMENT 0 YS2-18j06.p1k chrm 152 387 81 80 F 236 0.00 1466 reject_low 16 ALIGNMENT 0 YS2-18j06.p1k chrm 132 397 71262 71261 F 266 0.00 1466 reject_low 2 ALIGNMENT 0 YS2-18j06.p1k chrm 344 152 46404 46403 C 193 0.00 1466 reject_low 3 ALIGNMENT 45 YS2-18j06.q1k chrm 167 105 53823 53885 C 63 92.06 1368 reject_low 40 ALIGNMENT 31 YS2-18j06.q1k chrm 482 440 52772 52814 C 43 95.35 1368 reject_low 29 ALIGNMENT 56 YS2-18j06.q1k chrm 89 173 2716 2804 F 85 90.59 1368 reject_low 7,9,11,33 ALIGNMENT 30 YS2-18j06.p1k chrm 433 392 11047 11088 C 42 92.86 1466 reject_low 9 ALIGNMENT 0 YS2-18j06.q1k chrm 439 174 76638 77660 C 266 0.00 1368 reject_low 45 ALIGNMENT 0 YS2-18j06.q1k chrm 440 62 11089 11088 C 379 0.00 1368 reject_low 25 ALIGNMENT 0 YS2-18j06.p1k chrm 331 130 2195 9026 C 202 0.00 1466 reject_low 35 ALIGNMENT 35 YS2-18j06.p1k chrm 432 377 53828 53883 C 56 87.50 1466 reject_low 14 ALIGNMENT 0 YS2-18j06.q1k chrm 788 62 76642 76641 C 727 0.00 1368 reject_low 20 ALIGNMENT 0 YS2-18j06.q1k chrm 792 189 69416 69415 C 604 0.00 1368 reject_low 10 ALIGNMENT 0 YS2-18j06.p1k chrm 391 152 11089 11088 C 240 0.00 1466 reject_low 9 ALIGNMENT 0 YS2-18j06.q1k chrm 501 792 12327 12326 F 292 0.00 1368 reject_low 17 ALIGNMENT 0 YS2-18j06.p1k chrm 131 375 133 9472 F 245 0.00 1466 reject_low 37 ALIGNMENT 0 YS2-18j06.p1k chrm 389 152 77716 77715 C 238 0.00 1466 reject_low 32 ALIGNMENT 0 YS2-18j06.q1k chrm 62 440 33449 33448 F 379 0.00 1368 reject_low 30 ALIGNMENT 44 YS2-18j06.q1k chrm 121 183 33449 33509 F 63 92.06 1368 reject_low 3,4 ALIGNMENT 0 YS2-18j06.q1k chrm 792 181 3041 3040 C 612 0.00 1368 reject_low 16 ALIGNMENT 32 YS2-18j06.q1k chrm 188 33 69415 69576 C 156 80.77 1368 reject_low 10 ALIGNMENT 0 YS2-18j06.q1k chrm 431 174 69105 77660 C 258 0.00 1368 reject_low 44 ALIGNMENT 42 YS2-18j06.p1k chrm 449 378 81388 81458 C 72 87.50 1466 reject_low 21 ALIGNMENT 0 YS2-18j06.q1k chrm 792 483 66828 66827 C 310 0.00 1368 reject_low 39 ALIGNMENT 42 YS2-18j06.p1k chrm 450 376 9013 9091 C 75 86.67 1466 reject_low 33 ALIGNMENT 0 YS2-18j06.q1k chrm 792 483 10395 10394 C 310 0.00 1368 reject_low 37 ALIGNMENT 0 YS2-18j06.q1k chrm 439 62 34330 34329 C 378 0.00 1368 reject_low 24 ALIGNMENT 38 YS2-18j06.p1k chrm 390 450 71212 71271 F 61 88.52 1466 reject_low 6 ALIGNMENT 0 YS2-18j06.p1k chrm 376 152 53884 53883 C 225 0.00 1466 reject_low 14 ALIGNMENT 37 YS2-18j06.q1k chrm 783 836 52321 52374 F 54 90.74 1368 reject_low 19 ALIGNMENT 0 YS2-18j06.q1k chrm 104 62 53886 53885 C 43 0.00 1368 reject_low 40 ALIGNMENT 36 YS2-18j06.q1k chrm 567 425 69356 69501 C 143 80.42 1368 reject_low 1 ALIGNMENT 39 YS2-18j06.q1k chrm 482 424 10394 10451 C 59 89.83 1368 reject_low 37 ALIGNMENT 0 YS2-18j06.q1k chrm 485 792 2795 2794 F 308 0.00 1368 reject_low 23 ALIGNMENT 39 YS2-18j06.q1k chrm 484 432 69052 69104 C 53 92.45 1368 reject_low 44 ALIGNMENT 34 YS2-18j06.p1k chrm 80 132 52329 52382 F 53 88.68 1466 reject_low 5 ALIGNMENT 0 YS2-18j06.q1k chrm 62 710 2667 2666 F 649 0.00 1368 reject_low 12 ALIGNMENT 0 YS2-18j06.q1k chrm 792 483 3061 3060 C 310 0.00 1368 reject_low 43 ALIGNMENT 0 YS2-18j06.q1k chrm 792 483 52773 52772 C 310 0.00 1368 reject_low 29 ALIGNMENT 32 YS2-18j06.p1k chrm 124 80 81404 81448 C 45 91.11 1466 reject_low 38 ALIGNMENT 45 YS2-18j06.p1k chrm 379 447 52319 52387 F 69 88.41 1466 reject_low 8 ALIGNMENT 37 YS2-18j06.q1k chrm 484 441 11045 11088 C 44 97.73 1368 reject_low 25 ALIGNMENT 0 YS2-18j06.q1k chrm 120 62 34329 34328 C 59 0.00 1368 reject_low 28 ALIGNMENT 0 YS2-18j06.q1k chrm 772 482 52836 53827 C 291 0.00 1368 reject_low 42 ALIGNMENT 36 YS2-18j06.q1k chrm 835 789 76595 76641 C 47 93.62 1368 reject_low 20 ALIGNMENT 0 YS2-18j06.q1k chrm 777 484 69502 77670 C 294 0.00 1368 reject_low 41 ALIGNMENT 0 YS2-18j06.q1k chrm 120 62 10435 10434 C 59 0.00 1368 reject_low 31 ALIGNMENT 0 YS2-18j06.q1k chrm 792 179 66811 66810 C 614 0.00 1368 reject_low 5,8 ALIGNMENT 38 YS2-18j06.p1k chrm 129 80 9027 9076 C 50 92.00 1466 reject_low 35 ALIGNMENT 0 YS2-18j06.p1k chrm 152 389 71212 71211 F 238 0.00 1466 reject_low 6 ALIGNMENT 0 YS2-18j06.p1k chrm 152 378 52319 52318 F 227 0.00 1466 reject_low 8 ALIGNMENT 0 YS2-18j06.q1k chrm 792 174 52763 52762 C 619 0.00 1368 reject_low 27 ALIGNMENT 53 YS2-18j06.q1k chrm 171 89 34926 35007 C 83 89.16 1368 reject_low 36 ALIGNMENT 42 YS2-18j06.p1k chrm 81 134 9488 9541 F 54 92.59 1466 reject_bad_break 0 ALIGNMENT 32 YS2-18j06.p1k chrm 433 345 46315 46403 C 89 80.90 1466 reject_low 3 ALIGNMENT 0 YS2-18j06.q1k chrm 792 163 10395 10394 C 630 0.00 1368 reject_low 31 ALIGNMENT 38 YS2-18j06.p1k chrm 433 350 80503 80585 C 84 84.52 1466 reject_low 38 ALIGNMENT 0 YS2-18j06.p1k chrm 389 152 52816 52815 C 238 0.00 1466 reject_low 15 ALIGNMENT 28 YS2-18j06.p1k chrm 433 391 10746 10788 C 43 90.70 1466 reject_low 11 ALIGNMENT 47 YS2-18j06.q1k chrm 180 120 3040 3102 C 61 93.44 1368 reject_low 16 ALIGNMENT 0 YS2-18j06.q1k chrm 439 62 77715 77714 C 378 0.00 1368 reject_low 41 ALIGNMENT 0 YS2-18j06.q1k chrm 119 62 3103 3102 C 58 0.00 1368 reject_low 16 ALIGNMENT 0 YS2-18j06.p1k chrm 375 137 9092 11034 C 239 0.00 1466 reject_low 33 ALIGNMENT 0 YS2-18j06.q1k chrm 775 62 53886 53885 C 714 0.00 1368 reject_low 13 ALIGNMENT 45 YS2-18j06.q1k chrm 111 170 12259 12318 F 60 91.67 1368 reject_low 22 ALIGNMENT 29 YS2-18j06.q1k chrm 441 484 33449 33491 F 44 93.18 1368 reject_low 30 ALIGNMENT 0 YS2-18j06.q1k chrm 62 120 52332 52331 F 59 0.00 1368 reject_low 14,15 ALIGNMENT 38 YS2-18j06.q1k chrm 440 484 2751 2795 F 45 97.78 1368 reject_low 23 ALIGNMENT 0 YS2-18j06.q1k chrm 440 170 66869 69046 C 271 0.00 1368 reject_low 39 ALIGNMENT 42 YS2-18j06.q1k chrm 440 499 52331 52390 F 60 91.67 1368 reject_low 18 ALIGNMENT 0 YS2-18j06.p1k chrm 135 433 9542 9861 F 299 0.00 1466 reject_bad_break 0 ALIGNMENT 0 YS2-18j06.q1k chrm 500 792 52390 52389 F 293 0.00 1368 reject_low 18 ALIGNMENT 0 YS2-18j06.q1k chrm 111 62 76646 76645 C 50 0.00 1368 reject_low 2,6 ALIGNMENT 0 YS2-18j06.q1k chrm 111 62 66878 66877 C 50 0.00 1368 reject_low 5,8 ALIGNMENT 36 YS2-18j06.q1k chrm 835 778 69444 69501 C 58 87.93 1368 reject_low 41,45 ALIGNMENT 40 YS2-18j06.p1k chrm 136 81 11493 11549 C 56 91.07 1466 reject_low 34 ALIGNMENT 0 YS2-18j06.q1k chrm 62 439 2751 2750 F 378 0.00 1368 reject_low 23 ALIGNMENT 46 YS2-18j06.q1k chrm 169 64 69047 69151 C 106 83.96 1368 reject_low 39 ALIGNMENT 989 YS2-18j07.p1k chr05 32 1142 271689 272807 F 1111 97.21 1512 accept 0 ALIGNMENT 0 YS2-18j07.q1k chr05 203 62 277640 277639 C 142 0.00 1399 reject_low 2 ALIGNMENT 210 YS2-18j07.q1k chr05 90 1064 266920 267900 F 975 74.05 1399 reject_low 1 ALIGNMENT 1070 YS2-18j07.q1k chr05 1282 42 274545 275790 C 1241 95.33 1399 accept 0 ALIGNMENT 91 YS2-18j07.q1k chr05 1085 204 276753 277639 C 882 70.29 1399 reject_low 2 ALIGNMENT 0 YS2-18j07.q1k chr05 62 89 266920 266919 F 28 0.00 1399 reject_low 1 ALIGNMENT 1034 YS2-18j08.p1k chr05 32 1251 192130 193374 F 1220 95.25 1591 accept 0 ALIGNMENT 946 YS2-18j08.q1k chr05 1165 30 196260 197408 C 1136 95.25 1333 accept 0 ALIGNMENT 1044 YS2-18j10.p1k chr16 35 1261 888287 889530 F 1227 95.93 1592 accept 0 ALIGNMENT 1050 YS2-18j10.q1k chr16 1154 36 892928 894048 C 1119 98.48 1287 accept 0 ALIGNMENT 41 YS2-18j11.q1k vc_4 299 339 5831 5871 F 41 100.00 339 reject_low 3 ALIGNMENT 41 YS2-18j11.q1k vc_1 339 299 2472 2512 C 41 100.00 339 reject_low 1 ALIGNMENT 252 YS2-18j11.q1k chr05 29 300 244758 245030 F 272 99.26 339 accept 0 ALIGNMENT 0 YS2-18j11.q1k chr05 301 339 245030 245029 F 39 0.00 339 accept 0 ALIGNMENT 0 YS2-18j11.q1k vc_5 300 62 37 36 C 239 0.00 339 reject_low 6 ALIGNMENT 0 YS2-18j11.q1k vc_5 300 62 5064 5063 C 239 0.00 339 reject_low 4 ALIGNMENT 0 YS2-18j11.q1k vc_3 298 62 2513 2512 C 237 0.00 339 reject_low 2 ALIGNMENT 38 YS2-18j11.q1k vc_7 302 339 13525 13562 F 38 100.00 339 reject_low 5 ALIGNMENT 39 YS2-18j11.q1k vc_5 339 301 5025 5063 C 39 100.00 339 reject_low 4 ALIGNMENT 36 YS2-18j11.q1k vc_5 336 301 1 36 C 36 100.00 339 reject_low 6 ALIGNMENT 0 YS2-18j11.q1k vc_4 62 298 5831 5830 F 237 0.00 339 reject_low 3 ALIGNMENT 0 YS2-18j11.q1k vc_7 62 301 13525 13524 F 240 0.00 339 reject_low 5 ALIGNMENT 41 YS2-18j11.q1k vc_3 339 299 2472 2512 C 41 100.00 339 reject_low 2 ALIGNMENT 0 YS2-18j11.q1k vc_1 298 62 2513 2512 C 237 0.00 339 reject_low 1 ALIGNMENT 39 YS2-18j12.q1k vc_5 520 482 5025 5063 C 39 100.00 520 reject_low 12 ALIGNMENT 0 YS2-18j12.q1k vc_5 481 62 5064 5063 C 420 0.00 520 reject_low 12 ALIGNMENT 187 YS2-18j12.p1k vc_1 323 1 1411 1749 C 323 88.24 670 reject_vc 1 ALIGNMENT 0 YS2-18j12.q1k vc_2 478 62 2147 2146 C 417 0.00 520 reject_low 9 ALIGNMENT 36 YS2-18j12.q1k vc_5 517 482 1 36 C 36 100.00 520 reject_low 14 ALIGNMENT 42 YS2-18j12.q1k vc_4 479 520 5830 5871 F 42 100.00 520 reject_low 11 ALIGNMENT 42 YS2-18j12.q1k vc_1 520 479 2472 2513 C 42 100.00 520 reject_low 8 ALIGNMENT 184 YS2-18j12.p1k vc_7 1 323 456 794 F 323 87.93 670 reject_vc 6 ALIGNMENT 187 YS2-18j12.p1k vc_3 323 1 1411 1749 C 323 88.24 670 reject_vc 3 ALIGNMENT 187 YS2-18j12.p1k vc_2 323 1 1411 1749 C 323 88.24 670 reject_vc 2 ALIGNMENT 0 YS2-18j12.q1k chr10 481 520 593325 593324 F 40 0.00 520 accept 0 ALIGNMENT 184 YS2-18j12.p1k vc_7 1 323 13918 14256 F 323 87.93 670 reject_vc 7 ALIGNMENT 0 YS2-18j12.q1k vc_5 481 62 37 36 C 420 0.00 520 reject_low 14 ALIGNMENT 0 YS2-18j12.q1k vc_7 62 482 13525 13524 F 421 0.00 520 reject_low 13 ALIGNMENT 416 YS2-18j12.q1k chr10 39 480 592883 593325 F 442 99.32 520 accept 0 ALIGNMENT 187 YS2-18j12.p1k vc_6 1 323 3712 4050 F 323 88.24 670 reject_vc 5 ALIGNMENT 187 YS2-18j12.p1k vc_5 323 1 4331 4669 C 323 88.24 670 reject_vc 4 ALIGNMENT 42 YS2-18j12.q1k vc_2 520 479 2105 2146 C 42 100.00 520 reject_low 9 ALIGNMENT 0 YS2-18j12.q1k vc_1 478 62 2514 2513 C 417 0.00 520 reject_low 8 ALIGNMENT 42 YS2-18j12.q1k vc_3 520 479 2472 2513 C 42 100.00 520 reject_low 10 ALIGNMENT 38 YS2-18j12.q1k vc_7 483 520 13525 13562 F 38 100.00 520 reject_low 13 ALIGNMENT 0 YS2-18j12.q1k vc_4 62 478 5830 5829 F 417 0.00 520 reject_low 11 ALIGNMENT 0 YS2-18j12.q1k vc_3 478 62 2514 2513 C 417 0.00 520 reject_low 10 ALIGNMENT 896 YS2-18j13.p1k chr07 1105 34 570578 571663 C 1072 95.62 1406 ambiguous_trans 5 ALIGNMENT 798 YS2-18j13.q1k chr04 912 31 984814 985692 C 882 98.41 1305 ambiguous_trans 8 ALIGNMENT 337 YS2-18j13.q1k chr14 780 42 522883 523620 C 739 83.63 1305 reject_low 21 ALIGNMENT 318 YS2-18j13.q1k chr13 31 758 374133 374858 F 728 83.10 1305 reject_low 19 ALIGNMENT 0 YS2-18j13.p1k chr16 794 62 806800 806799 C 733 0.00 1406 reject_low 13 ALIGNMENT 97 YS2-18j13.p1k chr14 1036 795 98521 98766 C 242 80.99 1406 reject_low 28 ALIGNMENT 94 YS2-18j13.p1k chr16 795 1036 848174 848419 F 242 80.58 1406 reject_low 31 ALIGNMENT 318 YS2-18j13.q1k chr05 31 780 493928 494675 F 750 82.67 1305 reject_low 20 ALIGNMENT 0 YS2-18j13.p1k chr13 62 794 200094 200093 F 733 0.00 1406 reject_low 30 ALIGNMENT 0 YS2-18j13.p1k chr07 794 62 564006 564005 C 733 0.00 1406 reject_low 29 ALIGNMENT 801 YS2-18j13.q1k chr04 912 31 875465 876343 C 882 98.53 1305 ambiguous_trans 1 ALIGNMENT 905 YS2-18j13.p1k chr03 34 1105 87850 88935 F 1072 95.90 1406 ambiguous_trans 2 ALIGNMENT 789 YS2-18j13.q1k chr03 912 31 88459 89337 C 882 98.07 1305 ambiguous_trans 2 ALIGNMENT 887 YS2-18j13.p1k chr15 34 1105 973322 974407 F 1072 95.34 1406 ambiguous_trans 9 ALIGNMENT 324 YS2-18j13.q1k chr13 780 31 200072 200819 C 750 82.93 1305 reject_low 18 ALIGNMENT 893 YS2-18j13.p1k chr12 1105 34 977571 978656 C 1072 95.52 1406 ambiguous_trans 4 ALIGNMENT 327 YS2-18j13.q1k chr10 758 31 481724 482449 C 728 83.52 1305 reject_low 16 ALIGNMENT 890 YS2-18j13.p1k chr15 1105 34 705898 706983 C 1072 95.43 1406 ambiguous_trans 11 ALIGNMENT 896 YS2-18j13.p1k chr04 34 1105 874856 875941 F 1072 95.62 1406 ambiguous_trans 1 ALIGNMENT 795 YS2-18j13.q1k chr06 912 31 141557 142435 C 882 98.30 1305 ambiguous_trans 6 ALIGNMENT 330 YS2-18j13.q1k chr16 31 780 806074 806821 F 750 83.20 1305 reject_low 13 ALIGNMENT 0 YS2-18j13.p1k chr13 794 62 374859 374858 C 733 0.00 1406 reject_low 19 ALIGNMENT 801 YS2-18j13.q1k chr12 31 912 977169 978047 F 882 98.53 1305 ambiguous_trans 4 ALIGNMENT 333 YS2-18j13.q1k chr13 780 31 187905 188652 C 750 83.33 1305 reject_low 23 ALIGNMENT 97 YS2-18j13.p1k chr10 795 1036 481724 481969 F 242 80.99 1406 reject_low 27 ALIGNMENT 0 YS2-18j13.p1k chr05 794 62 494654 494653 C 733 0.00 1406 reject_low 20 ALIGNMENT 789 YS2-18j13.q1k chr15 31 912 705496 706374 F 882 98.07 1305 ambiguous_trans 11 ALIGNMENT 0 YS2-18j13.p1k chr10 62 794 481724 481723 F 733 0.00 1406 reject_low 27 ALIGNMENT 94 YS2-18j13.p1k chr05 1036 795 494408 494653 C 242 80.58 1406 reject_low 20 ALIGNMENT 0 YS2-18j13.p1k chr13 62 794 187927 187926 F 733 0.00 1406 reject_low 18 ALIGNMENT 333 YS2-18j13.q1k chr04 780 31 1099503 1100250 C 750 83.33 1305 reject_low 22 ALIGNMENT 765 YS2-18j13.q1k chr04 31 912 515116 515994 F 882 97.17 1305 ambiguous_trans 3 ALIGNMENT 94 YS2-18j13.p1k chr10 795 1036 476140 476385 F 242 80.58 1406 reject_low 16 ALIGNMENT 327 YS2-18j13.q1k chr04 780 31 1210431 1211178 C 750 83.07 1305 reject_low 25 ALIGNMENT 920 YS2-18j13.p1k chr12 34 1105 944229 945314 F 1072 96.36 1406 ambiguous_trans 0 ALIGNMENT 795 YS2-18j13.q1k chr07 31 912 570176 571054 F 882 98.30 1305 ambiguous_trans 5 ALIGNMENT 890 YS2-18j13.p1k chr04 34 1105 984205 985290 F 1072 95.43 1406 ambiguous_trans 8 ALIGNMENT 871 YS2-18j13.p1k chr02 34 1108 32681 33770 F 1075 94.88 1406 ambiguous_trans 12 ALIGNMENT 0 YS2-18j13.p1k chr05 794 62 445555 445554 C 733 0.00 1406 reject_low 17 ALIGNMENT 94 YS2-18j13.p1k chr05 1036 795 445309 445554 C 242 80.58 1406 reject_low 17 ALIGNMENT 97 YS2-18j13.p1k chr16 1036 795 852542 852787 C 242 80.99 1406 reject_low 14 ALIGNMENT 0 YS2-18j13.p1k chr14 794 62 98767 98766 C 733 0.00 1406 reject_low 28 ALIGNMENT 0 YS2-18j13.p1k chr10 62 794 476140 476139 F 733 0.00 1406 reject_low 16 ALIGNMENT 893 YS2-18j13.p1k chr07 34 1105 814492 815577 F 1072 95.52 1406 ambiguous_trans 7 ALIGNMENT 94 YS2-18j13.p1k chr13 795 1036 187927 188172 F 242 80.58 1406 reject_low 18 ALIGNMENT 333 YS2-18j13.q1k chr16 780 31 848152 848899 C 750 83.33 1305 reject_low 24 ALIGNMENT 896 YS2-18j13.p1k chr14 1105 34 563867 564952 C 1072 95.62 1406 ambiguous_trans 10 ALIGNMENT 97 YS2-18j13.p1k chr13 1036 795 374613 374858 C 242 80.99 1406 reject_low 19 ALIGNMENT 795 YS2-18j13.q1k chr12 912 31 944838 945716 C 882 98.30 1305 ambiguous_trans 0 ALIGNMENT 801 YS2-18j13.q1k chr15 912 31 973931 974809 C 882 98.53 1305 ambiguous_trans 9 ALIGNMENT 97 YS2-18j13.p1k chr13 964 795 358991 359160 C 170 86.47 1406 reject_low 15 ALIGNMENT 893 YS2-18j13.p1k chr06 34 1105 140948 142033 F 1072 95.52 1406 ambiguous_trans 6 ALIGNMENT 0 YS2-18j13.p1k chr16 794 62 852788 852787 C 733 0.00 1406 reject_low 14 ALIGNMENT 94 YS2-18j13.p1k chr07 1036 795 563760 564005 C 242 80.58 1406 reject_low 29 ALIGNMENT 324 YS2-18j13.q1k chr05 31 780 444829 445576 F 750 82.93 1305 reject_low 17 ALIGNMENT 795 YS2-18j13.q1k chr07 912 31 815101 815979 C 882 98.30 1305 ambiguous_trans 7 ALIGNMENT 94 YS2-18j13.p1k chr16 1036 795 806554 806799 C 242 80.58 1406 reject_low 13 ALIGNMENT 872 YS2-18j13.p1k chr04 1115 41 515506 516595 C 1075 94.88 1406 ambiguous_trans 3 ALIGNMENT 0 YS2-18j13.p1k chr13 794 62 359161 359160 C 733 0.00 1406 reject_low 15 ALIGNMENT 324 YS2-18j13.q1k chr16 31 780 852062 852809 F 750 82.93 1305 reject_low 14 ALIGNMENT 327 YS2-18j13.q1k chr13 31 780 358435 359182 F 750 83.07 1305 reject_low 15 ALIGNMENT 765 YS2-18j13.q1k chr02 912 31 33290 34168 C 882 97.17 1305 ambiguous_trans 12 ALIGNMENT 789 YS2-18j13.q1k chr14 31 912 563465 564343 F 882 98.07 1305 ambiguous_trans 10 ALIGNMENT 0 YS2-18j13.p1k chr16 62 794 848174 848173 F 733 0.00 1406 reject_low 31 ALIGNMENT 94 YS2-18j13.p1k chr13 795 1036 200094 200339 F 242 80.58 1406 reject_low 30 ALIGNMENT 321 YS2-18j13.q1k chr10 780 31 476118 476865 C 750 82.80 1305 reject_low 26 ALIGNMENT 957 YS2-18j15.p1k chr15 41 1122 1076882 1077974 F 1082 97.41 1431 accept_tel 0 ALIGNMENT 992 YS2-18j15.q1k chr15 1226 41 1079001 1080210 C 1186 95.62 1292 accept_tel 0 ALIGNMENT 896 YS2-18j15.q1k chr13 1226 41 918824 920024 C 1186 93.25 1292 reject_low 2 ALIGNMENT 963 YS2-18j15.q1k chr16 41 1226 10932 12140 F 1186 94.77 1292 reject_low 1 ALIGNMENT 929 YS2-18j15.p1k chr16 1109 41 13175 14253 C 1069 96.82 1431 reject_low 1 ALIGNMENT 958 YS2-18j16.p1k chr04 39 1078 149817 150860 F 1040 97.88 1413 accept_chi 0 ALIGNMENT 861 YS2-18j16.q1k chr02 1112 40 631619 632703 C 1073 94.87 1227 accept_chi 1 ALIGNMENT 968 YS2-18j17.p1k chr04 32 1113 402427 403514 F 1082 97.87 1419 accept 0 ALIGNMENT 940 YS2-18j17.q1k chr04 1123 29 406852 407965 C 1095 96.35 1264 accept 0 ALIGNMENT 0 YS2-18j18.q1k vc_5 554 62 37 36 C 493 0.00 593 reject_low 7 ALIGNMENT 0 YS2-18j18.q1k chr04 593 550 456342 456341 C 44 0.00 593 accept_chi 0 ALIGNMENT 494 YS2-18j18.q1k chr04 549 35 456341 456855 C 515 100.00 593 accept_chi 0 ALIGNMENT 474 YS2-18j18.p1k chr04 39 550 456341 456855 F 512 99.02 569 accept_chi 1 ALIGNMENT 0 YS2-18j18.q1k vc_1 552 62 2513 2512 C 491 0.00 593 reject_low 2 ALIGNMENT 36 YS2-18j18.q1k vc_5 590 555 1 36 C 36 100.00 593 reject_low 7 ALIGNMENT 0 YS2-18j18.q1k vc_5 554 62 5064 5063 C 493 0.00 593 reject_low 5 ALIGNMENT 39 YS2-18j18.q1k vc_5 593 555 5025 5063 C 39 100.00 593 reject_low 5 ALIGNMENT 0 YS2-18j18.q1k vc_7 62 555 13525 13524 F 494 0.00 593 reject_low 6 ALIGNMENT 41 YS2-18j18.q1k vc_1 593 553 2472 2512 C 41 100.00 593 reject_low 2 ALIGNMENT 0 YS2-18j18.q1k vc_3 552 62 2513 2512 C 491 0.00 593 reject_low 3 ALIGNMENT 0 YS2-18j18.q1k vc_4 62 552 5831 5830 F 491 0.00 593 reject_low 4 ALIGNMENT 41 YS2-18j18.q1k vc_4 553 593 5831 5871 F 41 100.00 593 reject_low 4 ALIGNMENT 0 YS2-18j18.p1k chr04 551 569 456855 456854 F 19 0.00 569 accept_chi 1 ALIGNMENT 38 YS2-18j18.q1k vc_7 556 593 13525 13562 F 38 100.00 593 reject_low 6 ALIGNMENT 41 YS2-18j18.q1k vc_3 593 553 2472 2512 C 41 100.00 593 reject_low 3 ALIGNMENT 987 YS2-18j19.q1k chr10 1145 40 443584 444686 C 1106 97.38 1268 accept 0 ALIGNMENT 1014 YS2-18j19.p1k chr10 33 1224 439652 440860 F 1192 95.97 1506 accept 0 ALIGNMENT 0 YS2-18j20.q1k vc_4 62 844 5831 5830 F 783 0.00 1233 reject_low 14 ALIGNMENT 34 YS2-18j20.q1k vc_7 848 885 13525 13562 F 38 94.74 1233 reject_low 21 ALIGNMENT 0 YS2-18j20.p1k chr04 846 878 909137 909136 F 33 0.00 1437 accept_chi 1 ALIGNMENT 0 YS2-18j20.p1k vc_3 863 62 2106 2105 C 802 0.00 1437 reject_low 6 ALIGNMENT 0 YS2-18j20.q1k vc_5 62 884 2398 2397 F 823 0.00 1233 reject_low 2 ALIGNMENT 0 YS2-18j20.q1k vc_5 846 62 5064 5063 C 785 0.00 1233 reject_low 20 ALIGNMENT 37 YS2-18j20.q1k vc_2 885 845 2105 2145 C 41 95.12 1233 reject_low 18 ALIGNMENT 231 YS2-18j20.q1k vc_1 885 1233 2531 2880 F 349 90.54 1233 reject_low 9 ALIGNMENT 180 YS2-18j20.p1k vc_7 864 1135 100 386 F 272 91.18 1437 reject_low 3 ALIGNMENT 0 YS2-18j20.p1k vc_1 863 62 2473 2472 C 802 0.00 1437 reject_low 23 ALIGNMENT 35 YS2-18j20.q1k vc_5 885 847 5025 5063 C 39 94.87 1233 reject_low 20 ALIGNMENT 181 YS2-18j20.p1k vc_1 1135 864 1819 2105 C 272 90.81 1437 reject_low 4 ALIGNMENT 0 YS2-18j20.q1k vc_1 62 884 2531 2530 F 823 0.00 1233 reject_low 9 ALIGNMENT 231 YS2-18j20.q1k vc_2 885 1233 2164 2513 F 349 90.54 1233 reject_low 10 ALIGNMENT 0 YS2-18j20.p1k vc_4 62 863 5871 5870 F 802 0.00 1437 reject_low 7 ALIGNMENT 0 YS2-18j20.q1k vc_4 884 62 1535 1534 C 823 0.00 1233 reject_low 15 ALIGNMENT 0 YS2-18j20.q1k vc_1 844 62 2513 2512 C 783 0.00 1233 reject_low 17 ALIGNMENT 37 YS2-18j20.q1k vc_4 845 885 5831 5871 F 41 95.12 1233 reject_low 14 ALIGNMENT 133 YS2-18j20.q1k vc_4 885 1046 126 287 F 162 96.30 1233 reject_low 13 ALIGNMENT 0 YS2-18j20.p1k vc_3 863 62 2473 2472 C 802 0.00 1437 reject_low 24 ALIGNMENT 180 YS2-18j20.p1k vc_4 864 1135 5871 6157 F 272 91.18 1437 reject_low 7 ALIGNMENT 0 YS2-18j20.q1k vc_4 62 884 126 125 F 823 0.00 1233 reject_low 13 ALIGNMENT 0 YS2-18j20.q1k vc_3 844 62 2513 2512 C 783 0.00 1233 reject_low 19 ALIGNMENT 0 YS2-18j20.q1k vc_2 62 884 2164 2163 F 823 0.00 1233 reject_low 10 ALIGNMENT 0 YS2-18j20.q1k vc_7 884 62 2728 2727 C 823 0.00 1233 reject_low 3 ALIGNMENT 0 YS2-18j20.q1k vc_7 1094 1095 5172 6360 C 0 0.00 1233 reject_low 16 ALIGNMENT 0 YS2-18j20.p1k vc_1 863 62 2106 2105 C 802 0.00 1437 reject_low 4 ALIGNMENT 133 YS2-18j20.q1k vc_4 885 1046 6353 6514 F 162 96.30 1233|1,0 reject_low 14 ALIGNMENT 37 YS2-18j20.q1k vc_1 885 845 2472 2512 C 41 95.12 1233 reject_low 17 ALIGNMENT 0 YS2-18j20.p1k vc_7 62 863 13562 13561 F 802 0.00 1437 reject_low 8 ALIGNMENT 0 YS2-18j20.p1k vc_2 863 62 2106 2105 C 802 0.00 1437 reject_low 5 ALIGNMENT 0 YS2-18j20.q1k vc_7 62 847 13525 13524 F 786 0.00 1233 reject_low 21 ALIGNMENT 0 YS2-18j20.p1k vc_5 863 62 5026 5025 C 802 0.00 1437 reject_low 2 ALIGNMENT 231 YS2-18j20.q1k vc_7 1233 885 2378 2727 C 349 90.54 1233 reject_low 3 ALIGNMENT 181 YS2-18j20.p1k vc_5 1135 864 4739 5025 C 272 90.81 1437 reject_low 2 ALIGNMENT 0 YS2-18j20.q1k vc_2 844 62 2146 2145 C 783 0.00 1233 reject_low 18 ALIGNMENT 0 YS2-18j20.p1k vc_7 62 863 100 99 F 802 0.00 1437 reject_low 3 ALIGNMENT 180 YS2-18j20.p1k vc_7 864 1135 13562 13848 F 272 91.18 1437 reject_low 8 ALIGNMENT 59 YS2-18j20.q1k vc_7 1233 1094 5033 5172 C 140 82.14 1233|0,1 reject_low 16 ALIGNMENT 0 YS2-18j20.q1k vc_3 62 884 2531 2530 F 823 0.00 1233 reject_low 11 ALIGNMENT 78 YS2-18j20.q1k vc_4 973 885 1446 1534 C 89 97.75 1233 reject_low 15 ALIGNMENT 0 YS2-18j20.q1k vc_4 886 885 5872 6353 F 0 0.00 1233 reject_low 14 ALIGNMENT 224 YS2-18j20.q1k vc_4 1233 885 5461 5812 C 349 89.97 1233 reject_low 12 ALIGNMENT 231 YS2-18j20.q1k vc_5 885 1233 2398 2747 F 349 90.54 1233 reject_low 2 ALIGNMENT 181 YS2-18j20.p1k vc_2 1135 864 1819 2105 C 272 90.81 1437 reject_low 5 ALIGNMENT 0 YS2-18j20.q1k vc_5 846 62 37 36 C 785 0.00 1233 reject_low 22 ALIGNMENT 0 YS2-18j20.q1k vc_7 1044 62 6412 6411 C 983 0.00 1233 reject_low 16 ALIGNMENT 40 YS2-18j20.q1k vc_7 1095 1045 6360 6411 C 51 94.12 1233|1,0 reject_low 16 ALIGNMENT 37 YS2-18j20.q1k vc_3 885 845 2472 2512 C 41 95.12 1233 reject_low 19 ALIGNMENT 759 YS2-18j20.q1k chr04 844 32 908325 909137 C 813 98.65 1233 accept_chi 0 ALIGNMENT 0 YS2-18j20.q1k vc_4 884 62 5813 5812 C 823 0.00 1233 reject_low 12 ALIGNMENT 231 YS2-18j20.q1k vc_3 885 1233 2531 2880 F 349 90.54 1233 reject_low 11 ALIGNMENT 32 YS2-18j20.q1k vc_5 882 847 1 36 C 36 94.44 1233 reject_low 22 ALIGNMENT 181 YS2-18j20.p1k vc_3 1135 864 1819 2105 C 272 90.81 1437 reject_low 6 ALIGNMENT 756 YS2-18j20.p1k chr04 34 845 908325 909137 F 812 98.52 1437 accept_chi 1 ALIGNMENT 22 YS2-18j20.p1k vc_3 895 864 2441 2472 C 32 93.75 1437 reject_low 24 ALIGNMENT 22 YS2-18j20.p1k vc_1 895 864 2441 2472 C 32 93.75 1437 reject_low 23 ALIGNMENT 975 YS2-18j21.q1k chr15 1142 28 1026929 1028046 C 1115 96.95 1378 accept 0 ALIGNMENT 1006 YS2-18j21.p1k chr15 27 1207 1023395 1024592 F 1181 96.27 1481 accept 0 ALIGNMENT 945 YS2-18j22.q1k chr04 40 1170 929186 930325 F 1131 95.40 1358 accept 0 ALIGNMENT 934 YS2-18j22.p1k chr04 1068 34 929583 930631 C 1035 97.68 1416 accept 0 ALIGNMENT 954 YS2-18j23.p1k chr12 1204 104 79300 80407 C 1101 96.82 1405 accept 0 ALIGNMENT 913 YS2-18j23.q1k chr12 25 1045 75282 76315 F 1021 98.04 1249 accept 0 ALIGNMENT 1009 YS2-18k01.p1k chr04 1176 32 1126191 1127323 C 1145 97.29 1466 accept 0 ALIGNMENT 985 YS2-18k01.q1k chr04 39 1163 1125117 1126244 F 1125 96.00 1168 accept 0 ALIGNMENT 0 YS2-18k02.p1k chr03 62 417 233730 233729 F 356 0.00 1424 reject_low 1 ALIGNMENT 1050 YS2-18k02.q1k chr03 1184 31 237459 238617 C 1154 97.05 1188 accept 0 ALIGNMENT 65 YS2-18k02.p1k chr03 358 464 233760 233866 F 107 86.92 1424 reject_low 2 ALIGNMENT 55 YS2-18k02.p1k chr03 418 517 233730 233829 F 100 85.00 1424 reject_low 1 ALIGNMENT 0 YS2-18k02.p1k chr03 62 357 233790 233789 F 296 0.00 1424 reject_low 3 ALIGNMENT 879 YS2-18k02.p1k chr03 27 1188 233399 234545 F 1162 93.03 1424 accept 0 ALIGNMENT 0 YS2-18k02.p1k chr03 518 854 233829 233828 F 337 0.00 1424 reject_low 1 ALIGNMENT 0 YS2-18k02.p1k chr03 465 854 233866 233865 F 390 0.00 1424 reject_low 2 ALIGNMENT 0 YS2-18k02.p1k chr03 415 854 233846 233845 F 440 0.00 1424 reject_low 3 ALIGNMENT 36 YS2-18k02.p1k chr03 358 414 233790 233846 F 57 87.72 1424 reject_low 3 ALIGNMENT 0 YS2-18k02.p1k chr03 62 357 233760 233759 F 296 0.00 1424 reject_low 2 ALIGNMENT 1003 YS2-18k03.q1k chr14 41 1238 197530 198741 F 1198 94.99 1299 accept 0 ALIGNMENT 1064 YS2-18k03.p1k chr14 1283 64 200756 201980 C 1220 96.15 1484 accept 0 ALIGNMENT 0 YS2-18k04.q1k chr13 578 538 619065 619064 C 41 0.00 578 accept_chi 0 ALIGNMENT 38 YS2-18k04.q1k vc_7 541 578 13525 13562 F 38 100.00 578 reject_low 7 ALIGNMENT 0 YS2-18k04.q1k vc_5 539 62 37 36 C 478 0.00 578 reject_low 8 ALIGNMENT 0 YS2-18k04.q1k vc_4 62 537 5831 5830 F 476 0.00 578 reject_low 5 ALIGNMENT 0 YS2-18k04.q1k vc_1 537 62 2513 2512 C 476 0.00 578 reject_low 2 ALIGNMENT 0 YS2-18k04.p1k chr13 562 578 619567 619566 F 17 0.00 578 accept_chi 1 ALIGNMENT 41 YS2-18k04.q1k vc_4 538 578 5831 5871 F 41 100.00 578 reject_low 5 ALIGNMENT 36 YS2-18k04.q1k vc_5 575 540 1 36 C 36 100.00 578 reject_low 8 ALIGNMENT 0 YS2-18k04.q1k vc_7 62 540 13525 13524 F 479 0.00 578 reject_low 7 ALIGNMENT 41 YS2-18k04.q1k vc_1 578 538 2472 2512 C 41 100.00 578 reject_low 2 ALIGNMENT 487 YS2-18k04.q1k chr13 537 34 619064 619567 C 504 100.00 578 accept_chi 0 ALIGNMENT 41 YS2-18k04.q1k vc_3 578 538 2472 2512 C 41 100.00 578 reject_low 4 ALIGNMENT 0 YS2-18k04.q1k vc_5 539 62 5064 5063 C 478 0.00 578 reject_low 6 ALIGNMENT 482 YS2-18k04.p1k chr13 57 561 619064 619567 F 505 99.60 578 accept_chi 1 ALIGNMENT 0 YS2-18k04.q1k vc_3 537 62 2513 2512 C 476 0.00 578 reject_low 4 ALIGNMENT 41 YS2-18k04.q1k vc_2 578 538 2105 2145 C 41 100.00 578 reject_low 3 ALIGNMENT 0 YS2-18k04.q1k vc_2 537 62 2146 2145 C 476 0.00 578 reject_low 3 ALIGNMENT 39 YS2-18k04.q1k vc_5 578 540 5025 5063 C 39 100.00 578 reject_low 6 ALIGNMENT 974 YS2-18k05.p1k chr05 1156 31 101171 102312 C 1126 97.34 1391 accept 0 ALIGNMENT 1000 YS2-18k05.q1k chr05 38 1199 97222 98390 F 1162 96.30 1335 accept 0 ALIGNMENT 0 YS2-18k06.p1k chr04 62 490 491508 491507 F 429 0.00 1523 reject_low 1 ALIGNMENT 339 YS2-18k06.q1k chr04 949 522 491893 492320 C 428 93.46 1332 reject_low 1 ALIGNMENT 44 YS2-18k06.p1k chr04 491 545 491508 491562 F 55 94.55 1523 reject_low 1 ALIGNMENT 0 YS2-18k06.p1k chr04 546 895 491562 491561 F 350 0.00 1523 reject_low 1 ALIGNMENT 967 YS2-18k06.q1k chr02 1117 30 333213 334303 C 1088 97.43 1332 accept 0 ALIGNMENT 985 YS2-18k06.p1k chr02 31 1237 332365 333584 F 1207 95.28 1523 accept 0 ALIGNMENT 0 YS2-18k06.q1k chr04 521 62 492321 492320 C 460 0.00 1332 reject_low 1 ALIGNMENT 41 YS2-18k07.q1k vc_3 213 173 2472 2512 C 41 100.00 213 reject_vc 2 ALIGNMENT 0 YS2-18k07.q1k vc_5 174 62 37 36 C 113 0.00 213 reject_vc 6 ALIGNMENT 39 YS2-18k07.q1k vc_5 213 175 5025 5063 C 39 100.00 213 reject_vc 4 ALIGNMENT 0 YS2-18k07.q1k vc_3 172 62 2513 2512 C 111 0.00 213 reject_vc 2 ALIGNMENT 0 YS2-18k07.q1k vc_7 62 175 13525 13524 F 114 0.00 213 reject_vc 5 ALIGNMENT 41 YS2-18k07.q1k vc_1 213 173 2472 2512 C 41 100.00 213 reject_vc 0 ALIGNMENT 38 YS2-18k07.q1k vc_7 176 213 13525 13562 F 38 100.00 213 reject_vc 5 ALIGNMENT 41 YS2-18k07.q1k vc_2 213 173 2105 2145 C 41 100.00 213 reject_vc 1 ALIGNMENT 0 YS2-18k07.q1k vc_5 174 62 5064 5063 C 113 0.00 213 reject_vc 4 ALIGNMENT 0 YS2-18k07.q1k vc_1 172 62 2513 2512 C 111 0.00 213 reject_vc 0 ALIGNMENT 0 YS2-18k07.q1k vc_2 172 62 2146 2145 C 111 0.00 213 reject_vc 1 ALIGNMENT 36 YS2-18k07.q1k vc_5 210 175 1 36 C 36 100.00 213 reject_vc 6 ALIGNMENT 41 YS2-18k07.q1k vc_4 173 213 5831 5871 F 41 100.00 213 reject_vc 3 ALIGNMENT 0 YS2-18k07.q1k vc_4 62 172 5831 5830 F 111 0.00 213 reject_vc 3 ALIGNMENT 1006 YS2-18k09.p1k chr15 1148 36 965091 966211 C 1113 97.84 1418 accept 0 ALIGNMENT 1000 YS2-18k09.q1k chr15 30 1180 960570 961730 F 1151 96.96 1267 accept 0 ALIGNMENT 0 YS2-18k10.q1k chr08 125 62 365430 365429 C 64 0.00 1363 reject_low 3 ALIGNMENT 0 YS2-18k10.q1k chr08 131 62 252910 252909 C 70 0.00 1363 reject_low 2 ALIGNMENT 0 YS2-18k10.q1k chr08 865 182 365414 365413 C 684 0.00 1363 reject_low 1 ALIGNMENT 24 YS2-18k10.q1k chr08 190 132 252851 252909 C 59 84.75 1363 reject_low 2 ALIGNMENT 24 YS2-18k10.q1k chr08 184 126 365371 365429 C 59 84.75 1363 reject_low 3 ALIGNMENT 983 YS2-18k10.p1k chr06 28 1140 219506 220632 F 1113 96.68 1459 accept 0 ALIGNMENT 22 YS2-18k10.q1k chr05 180 135 79215 79260 C 46 86.96 1363 reject_low 4 ALIGNMENT 29 YS2-18k10.q1k chr08 181 128 365413 365466 C 54 88.89 1363 reject_low 1 ALIGNMENT 0 YS2-18k10.q1k chr08 865 185 365372 365371 C 681 0.00 1363 reject_low 3 ALIGNMENT 1065 YS2-18k10.q1k chr06 1282 37 223455 224702 C 1246 95.35 1363 accept 0 ALIGNMENT 0 YS2-18k10.q1k chr05 134 62 79261 79260 C 73 0.00 1363 reject_low 4 ALIGNMENT 0 YS2-18k10.q1k chr05 865 181 79216 79215 C 685 0.00 1363 reject_low 4 ALIGNMENT 0 YS2-18k10.q1k chr08 865 191 252852 252851 C 675 0.00 1363 reject_low 2 ALIGNMENT 0 YS2-18k10.q1k chr08 127 62 365467 365466 C 66 0.00 1363 reject_low 1 ALIGNMENT 1037 YS2-18k13.p1k chr15 1206 29 963292 964483 C 1178 96.77 1472 accept 0 ALIGNMENT 935 YS2-18k13.q1k chr15 40 1131 959784 960889 F 1092 96.70 1211 accept 0 ALIGNMENT 981 YS2-18k14.q1k chr07 38 1271 215042 216280 F 1234 94.49 1274 accept 0 ALIGNMENT 901 YS2-18k14.p1k chr07 1048 28 219489 220524 C 1021 97.36 1381 accept 0 ALIGNMENT 987 YS2-18k15.p1k chr05 29 1111 120860 121951 F 1083 98.06 1390 accept 0 ALIGNMENT 1039 YS2-18k15.q1k chr05 1228 39 124042 125234 C 1190 96.55 1229 accept 0 ALIGNMENT 126 YS2-18k17.q1k chrm 39 204 38475 38640 F 166 98.19 243 accept 0 ALIGNMENT 0 YS2-18k17.q1k vc_5 204 62 5064 5063 C 143 0.00 243 reject_low 4 ALIGNMENT 40 YS2-18k17.q1k vc_4 204 243 5832 5871 F 40 100.00 243 reject_low 3 ALIGNMENT 40 YS2-18k17.q1k vc_1 243 204 2472 2511 C 40 100.00 243 reject_low 1 ALIGNMENT 0 YS2-18k17.q1k chrm 205 243 38640 38639 F 39 0.00 243 accept 0 ALIGNMENT 39 YS2-18k17.q1k vc_5 243 205 5025 5063 C 39 100.00 243 reject_low 4 ALIGNMENT 0 YS2-18k17.q1k vc_7 62 205 13525 13524 F 144 0.00 243 reject_low 5 ALIGNMENT 0 YS2-18k17.q1k vc_4 62 203 5832 5831 F 142 0.00 243 reject_low 3 ALIGNMENT 0 YS2-18k17.q1k vc_3 203 62 2512 2511 C 142 0.00 243 reject_low 2 ALIGNMENT 36 YS2-18k17.q1k vc_5 240 205 1 36 C 36 100.00 243 reject_low 6 ALIGNMENT 38 YS2-18k17.q1k vc_7 206 243 13525 13562 F 38 100.00 243 reject_low 5 ALIGNMENT 0 YS2-18k17.q1k vc_1 203 62 2512 2511 C 142 0.00 243 reject_low 1 ALIGNMENT 40 YS2-18k17.q1k vc_3 243 204 2472 2511 C 40 100.00 243 reject_low 2 ALIGNMENT 0 YS2-18k17.q1k vc_5 204 62 37 36 C 143 0.00 243 reject_low 6 ALIGNMENT 991 YS2-18k18.p1k chr13 29 1147 607210 608343 F 1119 97.05 1461 accept 0 ALIGNMENT 988 YS2-18k18.q1k chr13 1160 36 610612 611733 C 1125 96.80 1271 accept 0 ALIGNMENT 0 YS2-18k19.q1k vc_5 472 77 37 36 C 396 0.00 511 reject_low 7 ALIGNMENT 38 YS2-18k19.q1k vc_7 474 511 13525 13562 F 38 100.00 511 reject_low 6 ALIGNMENT 41 YS2-18k19.q1k vc_1 511 471 2472 2512 C 41 100.00 511 reject_low 2 ALIGNMENT 382 YS2-18k19.q1k chr07 40 470 601634 602066 F 431 98.14 511 accept_chi 1 ALIGNMENT 0 YS2-18k19.q1k vc_5 472 77 5064 5063 C 396 0.00 511 reject_low 5 ALIGNMENT 0 YS2-18k19.q1k vc_7 77 473 13525 13524 F 397 0.00 511 reject_low 6 ALIGNMENT 39 YS2-18k19.q1k vc_5 511 473 5025 5063 C 39 100.00 511 reject_low 5 ALIGNMENT 41 YS2-18k19.q1k vc_4 471 511 5831 5871 F 41 100.00 511 reject_low 4 ALIGNMENT 403 YS2-18k19.p1k chr07 471 37 601623 602058 C 435 99.31 488 accept_chi 0 ALIGNMENT 0 YS2-18k19.q1k vc_1 470 77 2513 2512 C 394 0.00 511 reject_low 2 ALIGNMENT 0 YS2-18k19.p1k chr07 488 472 601624 601623 C 17 0.00 488 accept_chi 0 ALIGNMENT 41 YS2-18k19.q1k vc_3 511 471 2472 2512 C 41 100.00 511 reject_low 3 ALIGNMENT 0 YS2-18k19.q1k chr07 471 511 602066 602065 F 41 0.00 511 accept_chi 1 ALIGNMENT 0 YS2-18k19.q1k vc_4 77 470 5831 5830 F 394 0.00 511 reject_low 4 ALIGNMENT 0 YS2-18k19.q1k vc_3 470 77 2513 2512 C 394 0.00 511 reject_low 3 ALIGNMENT 36 YS2-18k19.q1k vc_5 508 473 1 36 C 36 100.00 511 reject_low 7 ALIGNMENT 981 YS2-18k20.p1k chr04 1162 35 298436 299576 C 1128 96.28 1468 accept 0 ALIGNMENT 1008 YS2-18k20.q1k chr04 38 1237 294990 296192 F 1200 94.83 1246 accept 0 ALIGNMENT 0 YS2-18k21.q1k chr06 62 214 160567 160566 F 153 0.00 1286 reject_low 6 ALIGNMENT 0 YS2-18k21.q1k chr10 937 245 150077 150076 C 693 0.00 1286 reject_low 4 ALIGNMENT 0 YS2-18k21.q1k chr07 62 217 379165 379164 F 156 0.00 1286 reject_low 8 ALIGNMENT 0 YS2-18k21.q1k chr14 62 211 70024 70023 F 150 0.00 1286 reject_low 1 ALIGNMENT 0 YS2-18k21.q1k chr14 245 937 70056 70055 F 693 0.00 1286 reject_low 1 ALIGNMENT 0 YS2-18k21.q1k chr07 242 937 379188 379187 F 696 0.00 1286 reject_low 8 ALIGNMENT 26 YS2-18k21.q1k chr14 212 244 70024 70056 F 33 93.94 1286 reject_low 1 ALIGNMENT 0 YS2-18k21.q1k chr12 62 218 511530 511529 F 157 0.00 1286 reject_low 2 ALIGNMENT 0 YS2-18k21.q1k chr10 215 62 150105 150104 C 154 0.00 1286 reject_low 4 ALIGNMENT 22 YS2-18k21.q1k chr07 218 241 379165 379188 F 24 100.00 1286 reject_low 8 ALIGNMENT 20 YS2-18k21.q1k chr13 215 244 44380 44409 F 30 93.33 1286 reject_low 9 ALIGNMENT 0 YS2-18k21.q1k chr07 937 243 53131 53130 C 695 0.00 1286 reject_low 7 ALIGNMENT 964 YS2-18k21.p1k chr02 1125 32 650883 651998 C 1094 96.71 1330 accept 0 ALIGNMENT 22 YS2-18k21.q1k chr10 244 216 150076 150104 C 29 96.55 1286 reject_low 4 ALIGNMENT 0 YS2-18k21.q1k chr05 214 62 377480 377479 C 153 0.00 1286 reject_low 3 ALIGNMENT 22 YS2-18k21.q1k chr07 242 215 53130 53157 C 28 96.43 1286 reject_low 7 ALIGNMENT 0 YS2-18k21.q1k chr07 214 62 53158 53157 C 153 0.00 1286 reject_low 7 ALIGNMENT 0 YS2-18k21.q1k chr12 246 937 511556 511555 F 692 0.00 1286 reject_low 2 ALIGNMENT 22 YS2-18k21.q1k chr02 215 242 780439 780466 F 28 96.43 1286 reject_low 5 ALIGNMENT 0 YS2-18k21.q1k chr06 243 937 160594 160593 F 695 0.00 1286 reject_low 6 ALIGNMENT 950 YS2-18k21.q1k chr02 48 1120 649162 650237 F 1073 97.11 1286 accept 0 ALIGNMENT 0 YS2-18k21.q1k chr05 937 246 377450 377449 C 692 0.00 1286 reject_low 3 ALIGNMENT 0 YS2-18k21.q1k chr13 62 214 44380 44379 F 153 0.00 1286 reject_low 9 ALIGNMENT 0 YS2-18k21.q1k chr13 245 937 44409 44408 F 693 0.00 1286 reject_low 9 ALIGNMENT 0 YS2-18k21.q1k chr02 243 937 780466 780465 F 695 0.00 1286 reject_low 5 ALIGNMENT 22 YS2-18k21.q1k chr06 215 242 160567 160594 F 28 96.43 1286 reject_low 6 ALIGNMENT 21 YS2-18k21.q1k chr05 245 215 377449 377479 C 31 93.55 1286 reject_low 3 ALIGNMENT 0 YS2-18k21.q1k chr02 62 214 780439 780438 F 153 0.00 1286 reject_low 5 ALIGNMENT 22 YS2-18k21.q1k chr12 219 245 511530 511556 F 27 100.00 1286 reject_low 2 ALIGNMENT 1016 YS2-18k22.p1k chr10 31 1173 86803 87958 F 1143 97.46 1405 accept 0 ALIGNMENT 950 YS2-18k22.q1k chr10 1157 31 90030 91180 C 1127 95.65 1267 accept 0 ALIGNMENT 250 YS2-18k22.q1k chr11 431 112 109269 109588 C 320 92.81 1267 reject_low 1 ALIGNMENT 0 YS2-18k22.q1k chr11 767 432 109270 109269 C 336 0.00 1267 reject_low 1 ALIGNMENT 0 YS2-18k22.q1k chr11 111 62 109589 109588 C 50 0.00 1267 reject_low 1 ALIGNMENT 988 YS2-18k23.q1k chr04 40 1138 809111 810213 F 1099 97.36 1141 accept 0 ALIGNMENT 958 YS2-18k23.p1k chr04 1135 32 813394 814495 C 1104 96.29 1407 accept 0 ALIGNMENT 0 YS2-18k24.q1k vc_7 62 227 13525 13524 F 166 0.00 265 reject_low 6 ALIGNMENT 0 YS2-18k24.q1k vc_3 225 62 2512 2511 C 164 0.00 265 reject_low 3 ALIGNMENT 0 YS2-18k24.q1k vc_5 226 62 37 36 C 165 0.00 265 reject_low 7 ALIGNMENT 39 YS2-18k24.q1k vc_5 265 227 5025 5063 C 39 100.00 265 reject_low 5 ALIGNMENT 0 YS2-18k24.q1k chr16 265 226 252636 252635 C 40 0.00 265 accept 0 ALIGNMENT 0 YS2-18k24.q1k vc_1 225 62 2512 2511 C 164 0.00 265 reject_low 1 ALIGNMENT 0 YS2-18k24.q1k vc_5 226 62 5064 5063 C 165 0.00 265 reject_low 5 ALIGNMENT 0 YS2-18k24.q1k vc_2 225 62 2145 2144 C 164 0.00 265 reject_low 2 ALIGNMENT 179 YS2-18k24.q1k chr16 225 40 252635 252820 C 186 100.00 265 accept 0 ALIGNMENT 38 YS2-18k24.q1k vc_7 228 265 13525 13562 F 38 100.00 265 reject_low 6 ALIGNMENT 40 YS2-18k24.q1k vc_4 226 265 5832 5871 F 40 100.00 265 reject_low 4 ALIGNMENT 36 YS2-18k24.q1k vc_5 262 227 1 36 C 36 100.00 265 reject_low 7 ALIGNMENT 40 YS2-18k24.q1k vc_2 265 226 2105 2144 C 40 100.00 265 reject_low 2 ALIGNMENT 40 YS2-18k24.q1k vc_3 265 226 2472 2511 C 40 100.00 265 reject_low 3 ALIGNMENT 40 YS2-18k24.q1k vc_1 265 226 2472 2511 C 40 100.00 265 reject_low 1 ALIGNMENT 0 YS2-18k24.q1k vc_4 62 225 5832 5831 F 164 0.00 265 reject_low 4 ALIGNMENT 956 YS2-18l01.q1k chr07 31 1183 166385 167523 F 1153 95.75 1239 accept 0 ALIGNMENT 922 YS2-18l01.p1k chr07 1139 34 169812 170933 C 1106 96.65 1383 accept 0 ALIGNMENT 44 YS2-18l02.p1k chr15 691 482 512332 512541 C 210 75.24 1420 reject_low 1 ALIGNMENT 1006 YS2-18l02.q1k chr04 31 1142 1417200 1418317 F 1112 97.30 1213 accept 0 ALIGNMENT 0 YS2-18l02.p1k chr15 481 62 512542 512541 C 420 0.00 1420 reject_low 1 ALIGNMENT 0 YS2-18l02.p1k chr15 863 692 512333 512332 C 172 0.00 1420 reject_low 1 ALIGNMENT 973 YS2-18l02.p1k chr04 1158 31 1421329 1422461 C 1128 95.83 1420 accept 0 ALIGNMENT 0 YS2-18l04.q1k chr05 62 199 138666 138665 F 138 0.00 1269 reject_low 8 ALIGNMENT 0 YS2-18l04.q1k chr13 197 62 747965 747964 C 136 0.00 1269 reject_low 5 ALIGNMENT 0 YS2-18l04.q1k chr13 858 279 747885 747884 C 580 0.00 1269 reject_low 5 ALIGNMENT 0 YS2-18l04.q1k chr07 62 197 736343 736342 F 136 0.00 1269 reject_low 9 ALIGNMENT 78 YS2-18l04.q1k chr05 200 277 138666 138743 F 78 100.00 1269 reject_low 8 ALIGNMENT 0 YS2-18l04.q1k chr07 181 62 828818 828817 C 120 0.00 1269 reject_low 1 ALIGNMENT 0 YS2-18l04.q1k chr05 278 858 138743 138742 F 581 0.00 1269 reject_low 8 ALIGNMENT 0 YS2-18l04.q1k chr02 62 188 405861 405860 F 127 0.00 1269 reject_low 2 ALIGNMENT 81 YS2-18l04.q1k chr13 278 198 747884 747964 C 81 100.00 1269 reject_low 5 ALIGNMENT 0 YS2-18l04.q1k chr04 62 189 568869 568868 F 128 0.00 1269 reject_low 6 ALIGNMENT 81 YS2-18l04.q1k chr10 275 189 374418 374504 C 87 97.70 1269 reject_low 3 ALIGNMENT 0 YS2-18l04.q1k chr10 276 858 355365 355364 F 583 0.00 1269 reject_low 7 ALIGNMENT 80 YS2-18l04.q1k chr04 190 275 568869 568954 F 86 97.67 1269 reject_low 6 ALIGNMENT 0 YS2-18l04.q1k chr10 858 276 374419 374418 C 583 0.00 1269 reject_low 3 ALIGNMENT 0 YS2-18l04.q1k chr02 276 858 405947 405946 F 583 0.00 1269 reject_low 2 ALIGNMENT 0 YS2-18l04.q1k chr07 62 188 405462 405461 F 127 0.00 1269 reject_low 4 ALIGNMENT 0 YS2-18l04.q1k chr10 62 188 355279 355278 F 127 0.00 1269 reject_low 7 ALIGNMENT 81 YS2-18l04.q1k chr02 189 275 405861 405947 F 87 97.70 1269 reject_low 2 ALIGNMENT 77 YS2-18l04.q1k chr07 198 277 736343 736422 F 80 98.75 1269 reject_low 9 ALIGNMENT 0 YS2-18l04.q1k chr10 188 62 374505 374504 C 127 0.00 1269 reject_low 3 ALIGNMENT 0 YS2-18l04.q1k chr04 276 858 568954 568953 F 583 0.00 1269 reject_low 6 ALIGNMENT 81 YS2-18l04.q1k chr07 277 182 828722 828817 C 96 94.79 1269 reject_low 1 ALIGNMENT 80 YS2-18l04.q1k chr07 189 277 405462 405550 F 89 96.63 1269 reject_low 4 ALIGNMENT 0 YS2-18l04.q1k chr07 858 278 828723 828722 C 581 0.00 1269 reject_low 1 ALIGNMENT 0 YS2-18l04.q1k chr13 858 276 131822 131821 C 583 0.00 1269 reject_low 10 ALIGNMENT 1012 YS2-18l04.p1k chr11 34 1233 157258 158462 F 1200 95.08 1523 accept 0 ALIGNMENT 948 YS2-18l04.q1k chr11 1108 35 161642 162728 C 1074 97.58 1269 accept 0 ALIGNMENT 78 YS2-18l04.q1k chr10 189 275 355279 355365 F 87 96.55 1269 reject_low 7 ALIGNMENT 0 YS2-18l04.q1k chr07 278 858 736422 736421 F 581 0.00 1269 reject_low 9 ALIGNMENT 0 YS2-18l04.q1k chr13 196 62 131900 131899 C 135 0.00 1269 reject_low 10 ALIGNMENT 0 YS2-18l04.q1k chr07 278 858 405550 405549 F 581 0.00 1269 reject_low 4 ALIGNMENT 76 YS2-18l04.q1k chr13 275 197 131821 131899 C 79 98.73 1269 reject_low 10 ALIGNMENT 936 YS2-18l05.p1k chr02 29 1128 332365 333476 F 1100 96.64 1428 accept 0 ALIGNMENT 0 YS2-18l05.q1k chr04 520 62 492321 492320 C 459 0.00 1291 reject_low 1 ALIGNMENT 0 YS2-18l05.p1k chr04 544 892 491562 491561 F 349 0.00 1428 reject_low 1 ALIGNMENT 44 YS2-18l05.p1k chr04 489 543 491508 491562 F 55 94.55 1428 reject_low 1 ALIGNMENT 0 YS2-18l05.p1k chr04 62 488 491508 491507 F 427 0.00 1428 reject_low 1 ALIGNMENT 346 YS2-18l05.q1k chr04 947 521 491893 492320 C 427 93.44 1291 reject_low 1 ALIGNMENT 952 YS2-18l05.q1k chr02 1107 30 333210 334303 C 1078 97.03 1291 accept 0 ALIGNMENT 41 YS2-18l06.q1k vc_3 394 354 2472 2512 C 41 100.00 394 reject_low 4 ALIGNMENT 0 YS2-18l06.q1k vc_5 355 62 5064 5063 C 294 0.00 394 reject_low 6 ALIGNMENT 41 YS2-18l06.q1k vc_4 354 394 5831 5871 F 41 100.00 394 reject_low 5 ALIGNMENT 0 YS2-18l06.q1k vc_3 353 62 2513 2512 C 292 0.00 394 reject_low 4 ALIGNMENT 0 YS2-18l06.q1k chr04 355 394 806400 806399 F 40 0.00 394 accept_chi 1 ALIGNMENT 0 YS2-18l06.q1k vc_2 353 62 2146 2145 C 292 0.00 394 reject_low 3 ALIGNMENT 0 YS2-18l06.q1k vc_1 353 62 2513 2512 C 292 0.00 394 reject_low 2 ALIGNMENT 0 YS2-18l06.q1k vc_4 62 353 5831 5830 F 292 0.00 394 reject_low 5 ALIGNMENT 36 YS2-18l06.q1k vc_5 391 356 1 36 C 36 100.00 394 reject_low 8 ALIGNMENT 39 YS2-18l06.q1k vc_5 394 356 5025 5063 C 39 100.00 394 reject_low 6 ALIGNMENT 0 YS2-18l06.q1k vc_7 62 356 13525 13524 F 295 0.00 394 reject_low 7 ALIGNMENT 41 YS2-18l06.q1k vc_1 394 354 2472 2512 C 41 100.00 394 reject_low 2 ALIGNMENT 293 YS2-18l06.q1k chr04 34 354 806078 806400 F 321 97.82 394 accept_chi 1 ALIGNMENT 0 YS2-18l06.p1k chr04 377 359 806079 806078 C 19 0.00 377 accept_chi 0 ALIGNMENT 297 YS2-18l06.p1k chr04 358 39 806078 806397 C 320 98.12 377 accept_chi 0 ALIGNMENT 38 YS2-18l06.q1k vc_7 357 394 13525 13562 F 38 100.00 394 reject_low 7 ALIGNMENT 0 YS2-18l06.q1k vc_5 355 62 37 36 C 294 0.00 394 reject_low 8 ALIGNMENT 41 YS2-18l06.q1k vc_2 394 354 2105 2145 C 41 100.00 394 reject_low 3 ALIGNMENT 310 YS2-18l07.q1k vc_5 762 1176 2398 2823 F 415 92.05 1322 reject_low 6 ALIGNMENT 310 YS2-18l07.q1k vc_7 1177 762 2300 2727 C 416 92.07 1322 reject_low 2 ALIGNMENT 310 YS2-18l07.q1k vc_3 762 1176 2531 2956 F 415 92.05 1322 reject_low 5 ALIGNMENT 664 YS2-18l07.p1k chr04 32 725 563639 564333 F 694 99.42 726 accept_chi 1 ALIGNMENT 38 YS2-18l07.q1k vc_7 725 762 13525 13562 F 38 100.00 1322 reject_low 17 ALIGNMENT 0 YS2-18l07.q1k vc_4 761 62 1535 1534 C 700 0.00 1322 reject_low 11 ALIGNMENT 0 YS2-18l07.q1k vc_7 761 62 2728 2727 C 700 0.00 1322 reject_low 2 ALIGNMENT 310 YS2-18l07.q1k vc_2 762 1176 2164 2589 F 415 92.05 1322 reject_low 4 ALIGNMENT 0 YS2-18l07.q1k vc_7 763 877 100 99 F 115 0.00 1322 reject_low 16 ALIGNMENT 0 YS2-18l07.q1k vc_5 723 62 5064 5063 C 662 0.00 1322 reject_low 15 ALIGNMENT 0 YS2-18l07.q1k vc_2 62 761 2164 2163 F 700 0.00 1322 reject_low 4 ALIGNMENT 0 YS2-18l07.q1k vc_4 877 851 1447 1446 C 27 0.00 1322 reject_low 11 ALIGNMENT 0 YS2-18l07.q1k vc_7 921 62 6412 6411 C 860 0.00 1322 reject_low 10 ALIGNMENT 0 YS2-18l07.q1k vc_7 62 724 13525 13524 F 663 0.00 1322 reject_low 17 ALIGNMENT 0 YS2-18l07.q1k vc_4 62 761 126 125 F 700 0.00 1322 reject_low 8 ALIGNMENT 0 YS2-18l07.q1k vc_4 761 62 5813 5812 C 700 0.00 1322 reject_low 7 ALIGNMENT 41 YS2-18l07.q1k vc_2 762 722 2105 2145 C 41 100.00 1322 reject_low 13 ALIGNMENT 38 YS2-18l07.q1k vc_7 725 762 63 100 F 38 100.00 1322 reject_low 16 ALIGNMENT 670 YS2-18l07.q1k chr04 721 32 563639 564328 C 690 99.86 1322 accept_chi 0 ALIGNMENT 0 YS2-18l07.q1k vc_5 877 760 2 1 C 118 0.00 1322 reject_low 18 ALIGNMENT 126 YS2-18l07.q1k vc_7 1177 970 4955 5172 C 208 87.02 1322|0,1 reject_low 10 ALIGNMENT 41 YS2-18l07.q1k vc_4 722 762 5831 5871 F 41 100.00 1322 reject_low 9 ALIGNMENT 0 YS2-18l07.q1k vc_3 877 763 2473 2472 C 115 0.00 1322 reject_low 14 ALIGNMENT 0 YS2-18l07.q1k vc_1 721 62 2513 2512 C 660 0.00 1322 reject_low 12 ALIGNMENT 148 YS2-18l07.q1k vc_4 762 922 6353 6514 F 161 98.14 1322|1,0 reject_low 9 ALIGNMENT 0 YS2-18l07.q1k vc_4 62 721 5831 5830 F 660 0.00 1322 reject_low 9 ALIGNMENT 36 YS2-18l07.q1k vc_5 759 724 1 36 C 36 100.00 1322 reject_low 18 ALIGNMENT 0 YS2-18l07.q1k vc_3 62 761 2531 2530 F 700 0.00 1322 reject_low 5 ALIGNMENT 40 YS2-18l07.q1k vc_7 971 922 6360 6411 C 50 94.00 1322|1,0 reject_low 10 ALIGNMENT 87 YS2-18l07.q1k vc_4 850 762 1446 1534 C 89 100.00 1322 reject_low 11 ALIGNMENT 303 YS2-18l07.q1k vc_4 1177 762 5383 5812 C 416 91.59 1322 reject_low 7 ALIGNMENT 310 YS2-18l07.q1k vc_1 762 1176 2531 2956 F 415 92.05 1322 reject_low 3 ALIGNMENT 41 YS2-18l07.q1k vc_3 762 722 2472 2512 C 41 100.00 1322 reject_low 14 ALIGNMENT 0 YS2-18l07.q1k vc_7 970 971 5172 6360 C 0 0.00 1322 reject_low 10 ALIGNMENT 0 YS2-18l07.q1k vc_1 877 763 2473 2472 C 115 0.00 1322 reject_low 12 ALIGNMENT 0 YS2-18l07.q1k vc_5 877 763 5026 5025 C 115 0.00 1322 reject_low 15 ALIGNMENT 0 YS2-18l07.q1k vc_1 62 761 2531 2530 F 700 0.00 1322 reject_low 3 ALIGNMENT 0 YS2-18l07.q1k vc_7 62 724 63 62 F 663 0.00 1322 reject_low 16 ALIGNMENT 0 YS2-18l07.q1k vc_7 763 877 13562 13561 F 115 0.00 1322 reject_low 17 ALIGNMENT 148 YS2-18l07.q1k vc_4 762 922 126 287 F 161 98.14 1322 reject_low 8 ALIGNMENT 0 YS2-18l07.q1k vc_2 877 763 2106 2105 C 115 0.00 1322 reject_low 13 ALIGNMENT 39 YS2-18l07.q1k vc_5 762 724 5025 5063 C 39 100.00 1322 reject_low 15 ALIGNMENT 0 YS2-18l07.q1k vc_5 62 761 2398 2397 F 700 0.00 1322 reject_low 6 ALIGNMENT 0 YS2-18l07.q1k vc_4 763 762 5872 6353 F 0 0.00 1322 reject_low 9 ALIGNMENT 41 YS2-18l07.q1k vc_1 762 722 2472 2512 C 41 100.00 1322 reject_low 12 ALIGNMENT 0 YS2-18l07.q1k vc_2 721 62 2146 2145 C 660 0.00 1322 reject_low 13 ALIGNMENT 0 YS2-18l07.q1k chr04 877 722 563640 563639 C 156 0.00 1322 accept_chi 0 ALIGNMENT 0 YS2-18l07.q1k vc_3 721 62 2513 2512 C 660 0.00 1322 reject_low 14 ALIGNMENT 0 YS2-18l07.q1k vc_5 723 62 37 36 C 662 0.00 1322 reject_low 18 ALIGNMENT 0 YS2-18l08.p1k chr14 62 301 1801 1800 F 240 0.00 478 reject_low 195 ALIGNMENT 0 YS2-18l08.p1k chr05 478 460 575006 575005 C 19 0.00 478 reject_low 121 ALIGNMENT 93 YS2-18l08.p1k chr16 459 327 946362 946494 C 133 92.48 478 reject_low 6 ALIGNMENT 56 YS2-18l08.p1k chr04 459 291 1530140 1530308 C 169 80.47 478 reject_low 171 ALIGNMENT 84 YS2-18l08.q1k chr15 40 205 1089377 1089542 F 166 86.14 506 reject_low 84 ALIGNMENT 80 YS2-18l08.q1k chr10 208 40 2029 2197 C 169 85.21 506 reject_low 89 ALIGNMENT 0 YS2-18l08.p1k chr08 406 478 1909 1908 F 73 0.00 478 reject_low 253 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1710 1709 F 19 0.00 478 reject_low 46 ALIGNMENT 0 YS2-18l08.q1k chr09 506 209 1795 1794 C 298 0.00 506 reject_low 93 ALIGNMENT 0 YS2-18l08.p1k chr05 62 326 1470 1469 F 265 0.00 478 reject_low 67,68 ALIGNMENT 89 YS2-18l08.q1k chr16 40 208 946110 946278 F 169 86.98 506 reject_low 71,74 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 1801 1800 F 19 0.00 478 reject_low 41 ALIGNMENT 0 YS2-18l08.q1k chr12 506 209 7399 7398 C 298 0.00 506 reject_low 39,43,51 ALIGNMENT 0 YS2-18l08.q1k chr16 62 93 945984 945983 F 32 0.00 506 reject_low 196 ALIGNMENT 0 YS2-18l08.p1k chr09 62 290 1830 1829 F 229 0.00 478 reject_low 88 ALIGNMENT 64 YS2-18l08.q1k chr12 209 58 2042 2193 C 152 83.55 506|0,4 reject_low 294 ALIGNMENT 0 YS2-18l08.q1k chr05 506 209 1759 1758 C 298 0.00 506 reject_low 188 ALIGNMENT 50 YS2-18l08.q1k chr02 208 40 1918 2086 C 169 79.29 506 reject_low 180 ALIGNMENT 0 YS2-18l08.q1k chr02 506 198 2074 2073 C 309 0.00 506 reject_low 141 ALIGNMENT 68 YS2-18l08.p1k chr08 441 291 560439 560589 C 151 84.77 478 reject_low 217 ALIGNMENT 59 YS2-18l08.q1k chr14 208 40 1754 1922 C 169 81.07 506 reject_low 163 ALIGNMENT 38 YS2-18l08.q1k chr12 94 208 1069624 1069738 F 115 80.87 506 reject_low 202,302 ALIGNMENT 0 YS2-18l08.q1k chr05 206 506 575206 575205 F 301 0.00 506 reject_low 78 ALIGNMENT 44 YS2-18l08.q1k chr08 208 58 1759 1909 C 151 79.47 506 reject_low 170,200 ALIGNMENT 0 YS2-18l08.p1k chr12 478 454 1069721 1069720 C 25 0.00 478 reject_low 134 ALIGNMENT 80 YS2-18l08.q1k chr05 208 40 1650 1818 C 169 85.21 506 reject_low 139 ALIGNMENT 81 YS2-18l08.q1k chr05 40 205 575005 575170 F 166 85.54 506 reject_low 95 ALIGNMENT 0 YS2-18l08.p1k chr10 62 301 1932 1931 F 240 0.00 478 reject_low 69 ALIGNMENT 0 YS2-18l08.q1k chr16 506 198 1711 1710 C 309 0.00 506 reject_low 182 ALIGNMENT 59 YS2-18l08.q1k chr13 208 40 1847 2015 C 169 81.07 506 reject_low 162 ALIGNMENT 71 YS2-18l08.p1k chr02 302 459 2217 2374 F 158 84.18 478 reject_low 136 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946363 946362 C 19 0.00 478 reject_low 6 ALIGNMENT 0 YS2-18l08.q1k chr12 53 52 1070015 1076605 F 0 0.00 506 reject_low 303 ALIGNMENT 0 YS2-18l08.p1k chr08 478 406 560440 560439 C 73 0.00 478 reject_low 252 ALIGNMENT 92 YS2-18l08.q1k chr10 197 40 2004 2161 C 158 88.61 506 reject_low 59,69 ALIGNMENT 0 YS2-18l08.p1k chr14 62 293 1721 1720 F 232 0.00 478 reject_low 124 ALIGNMENT 0 YS2-18l08.q1k chr13 506 210 1919 1918 C 297 0.00 506 reject_low 123 ALIGNMENT 0 YS2-18l08.q1k chr14 506 137 1575 1574 C 370 0.00 506 reject_low 229 ALIGNMENT 360 YS2-18l08.q1k chr16 465 40 1226 1651 C 426 95.54 506 reject_low 29 ALIGNMENT 0 YS2-18l08.p1k chr15 290 62 1089366 1089365 C 229 0.00 478 reject_low 249 ALIGNMENT 0 YS2-18l08.p1k chr07 478 424 1089083 1089082 C 55 0.00 478 reject_low 197 ALIGNMENT 0 YS2-18l08.p1k chr14 406 478 1976 1975 F 73 0.00 478 reject_low 242 ALIGNMENT 0 YS2-18l08.q1k chr12 206 506 1076542 1076541 F 301 0.00 506 reject_low 293 ALIGNMENT 77 YS2-18l08.q1k chr04 46 205 1530182 1530341 F 160 85.62 506 reject_low 103 ALIGNMENT 51 YS2-18l08.p1k chr07 459 363 1089298 1089394 C 97 86.60 478 reject_low 24 ALIGNMENT 0 YS2-18l08.q1k chr14 506 209 1647 1646 C 298 0.00 506 reject_low 54 ALIGNMENT 0 YS2-18l08.p1k chr16 290 62 946423 946422 C 229 0.00 478 reject_low 58 ALIGNMENT 89 YS2-18l08.p1k chr12 291 459 1719 1887 F 169 86.98 478 reject_low 284 ALIGNMENT 0 YS2-18l08.p1k chr09 460 478 2034 2033 F 19 0.00 478 reject_low 106 ALIGNMENT 84 YS2-18l08.p1k chr15 459 294 1089377 1089542 C 166 86.14 478 reject_low 105 ALIGNMENT 81 YS2-18l08.p1k chr16 459 294 946074 946239 C 166 85.54 478 reject_low 125 ALIGNMENT 0 YS2-18l08.q1k chr10 506 101 1670 1669 C 406 0.00 506 reject_low 246 ALIGNMENT 0 YS2-18l08.p1k chr15 478 460 1089378 1089377 C 19 0.00 478 reject_low 105 ALIGNMENT 0 YS2-18l08.p1k chr10 442 478 2215 2214 F 37 0.00 478 reject_low 155 ALIGNMENT 71 YS2-18l08.q1k chr08 40 197 560457 560614 F 158 84.18 506 reject_low 128 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 1707 1706 F 19 0.00 478 reject_low 305 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1566 1565 F 19 0.00 478 reject_low 139 ALIGNMENT 0 YS2-18l08.q1k chr02 506 209 1991 1990 C 298 0.00 506 reject_low 138,145 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1782 1781 F 19 0.00 478 reject_low 57 ALIGNMENT 53 YS2-18l08.q1k chr16 197 40 1710 1867 C 158 80.38 506 reject_low 182 ALIGNMENT 101 YS2-18l08.q1k chr16 208 40 1555 1723 C 169 89.35 506 reject_low 56 ALIGNMENT 0 YS2-18l08.q1k chr05 506 209 1579 1578 C 298 0.00 506 reject_low 8,45,46 ALIGNMENT 0 YS2-18l08.q1k chr07 206 506 1089283 1089282 F 301 0.00 506 reject_low 79 ALIGNMENT 41 YS2-18l08.q1k chr07 143 209 1089077 1089143 F 67 89.55 506 reject_low 218 ALIGNMENT 0 YS2-18l08.p1k chr15 434 62 1089654 1089653 C 373 0.00 478 reject_low 213 ALIGNMENT 53 YS2-18l08.q1k chr12 197 40 7553 7710 C 158 80.38 506 reject_low 157,181 ALIGNMENT 0 YS2-18l08.p1k chr09 62 290 1794 1793 F 229 0.00 478 reject_low 72 ALIGNMENT 111 YS2-18l08.p1k chr09 327 459 1686 1818 F 133 96.99 478 reject_low 40 ALIGNMENT 116 YS2-18l08.p1k chr09 291 459 1722 1890 F 169 92.31 478 reject_low 36 ALIGNMENT 50 YS2-18l08.q1k chr15 40 197 1089269 1089426 F 158 79.75 506 reject_low 173 ALIGNMENT 74 YS2-18l08.q1k chr10 208 58 2065 2215 C 151 86.09 506 reject_low 108,111,117 ALIGNMENT 95 YS2-18l08.q1k chr12 208 40 1827 1995 C 169 88.17 506|84,0 reject_low 283 ALIGNMENT 0 YS2-18l08.p1k chr12 62 290 1827 1826 F 229 0.00 478 reject_low 282 ALIGNMENT 110 YS2-18l08.p1k chr05 291 459 1614 1782 F 169 91.12 478 reject_low 57 ALIGNMENT 0 YS2-18l08.p1k chr16 478 406 945985 945984 C 73 0.00 478 reject_low 243 ALIGNMENT 0 YS2-18l08.p1k chr09 62 326 1686 1685 F 265 0.00 478 reject_low 40 ALIGNMENT 56 YS2-18l08.p1k chr12 459 291 1069678 1069846 C 169 80.47 478 reject_low 172 ALIGNMENT 21 YS2-18l08.q1k chr05 40 64 575293 575317 F 25 96.00 506 reject_low 268 ALIGNMENT 21 YS2-18l08.q1k chr04 40 64 1530464 1530488 F 25 96.00 506 reject_low 267 ALIGNMENT 0 YS2-18l08.q1k chr05 62 93 574915 574914 F 32 0.00 506 reject_low 192 ALIGNMENT 37 YS2-18l08.p1k chr16 291 400 1771 1880 F 110 80.91 478 reject_low 250 ALIGNMENT 75 YS2-18l08.p1k chr09 363 459 1686 1782 F 97 94.85 478 reject_low 93 ALIGNMENT 84 YS2-18l08.q1k chr14 205 40 1685 1850 C 166 86.14 506 reject_low 83 ALIGNMENT 0 YS2-18l08.q1k chr02 506 65 1487 1486 C 442 0.00 506 reject_low 266 ALIGNMENT 0 YS2-18l08.p1k chr16 290 62 946351 946350 C 229 0.00 478 reject_low 74 ALIGNMENT 41 YS2-18l08.q1k chr16 94 208 945984 946098 F 115 81.74 506 reject_low 196 ALIGNMENT 0 YS2-18l08.q1k chr16 506 137 1484 1483 C 370 0.00 506 reject_low 230 ALIGNMENT 0 YS2-18l08.p1k chr12 62 290 7362 7361 F 229 0.00 478 reject_low 51 ALIGNMENT 21 YS2-18l08.p1k chr13 435 459 1667 1691 F 25 96.00 478 reject_low 276 ALIGNMENT 51 YS2-18l08.p1k chr15 459 363 1089557 1089653 C 97 86.60 478 reject_low 25,168 ALIGNMENT 59 YS2-18l08.q1k chr02 213 40 1769 1942 C 174 80.46 506 reject_low 150 ALIGNMENT 0 YS2-18l08.p1k chr12 62 293 7437 7436 F 232 0.00 478 reject_low 97 ALIGNMENT 53 YS2-18l08.q1k chr13 197 40 1894 2051 C 158 80.38 506 reject_low 158 ALIGNMENT 0 YS2-18l08.p1k chr16 460 478 1867 1866 F 19 0.00 478 reject_low 199 ALIGNMENT 92 YS2-18l08.p1k chr02 291 459 1558 1726 F 169 87.57 478 reject_low 76 ALIGNMENT 0 YS2-18l08.p1k chr12 362 62 1076690 1076689 C 301 0.00 478 reject_low 35,286,288,292,293,297 ALIGNMENT 71 YS2-18l08.p1k chr10 286 459 1880 2053 F 174 82.76 478 reject_low 108 ALIGNMENT 0 YS2-18l08.p1k chr09 460 478 1710 1709 F 19 0.00 478 reject_low 262 ALIGNMENT 0 YS2-18l08.q1k chr08 506 137 1652 1651 C 370 0.00 506 reject_low 219 ALIGNMENT 0 YS2-18l08.p1k chr15 290 62 1089474 1089473 C 229 0.00 478 reject_low 173 ALIGNMENT 0 YS2-18l08.p1k chr10 62 301 2004 2003 F 240 0.00 478 reject_low 89 ALIGNMENT 0 YS2-18l08.q1k chr13 506 65 1668 1667 C 442 0.00 506 reject_low 272 ALIGNMENT 0 YS2-18l08.q1k chr14 506 209 1755 1754 C 298 0.00 506 reject_low 163 ALIGNMENT 92 YS2-18l08.q1k chr12 208 40 1791 1959 C 169 87.57 506|84,0 reject_low 284 ALIGNMENT 77 YS2-18l08.p1k chr12 453 294 1076383 1076542 C 160 85.62 478|9,0 reject_low 287 ALIGNMENT 0 YS2-18l08.q1k chr15 65 506 1089653 1089652 F 442 0.00 506 reject_low 274 ALIGNMENT 360 YS2-18l08.p1k chr02 34 459 1229 1654 F 426 95.54 478 reject_low 12 ALIGNMENT 0 YS2-18l08.q1k chr02 506 209 2099 2098 C 298 0.00 506 reject_low 102,107 ALIGNMENT 0 YS2-18l08.p1k chr08 62 290 1723 1722 F 229 0.00 478 reject_low 170 ALIGNMENT 24 YS2-18l08.q1k chr10 64 40 1669 1693 C 25 100.00 506 reject_low 257 ALIGNMENT 59 YS2-18l08.q1k chr12 208 40 1971 2139 C 169 81.07 506|84,0 reject_low 298 ALIGNMENT 113 YS2-18l08.p1k chr12 459 291 1076485 1076653 C 169 91.72 478|12,0 reject_low 279 ALIGNMENT 71 YS2-18l08.p1k chr09 286 459 1897 2070 F 174 82.76 478 reject_low 126 ALIGNMENT 0 YS2-18l08.q1k chr05 506 101 1471 1470 C 406 0.00 506 reject_low 234 ALIGNMENT 101 YS2-18l08.q1k chr12 40 208 1069786 1069954 F 169 89.35 506 reject_low 52,280 ALIGNMENT 101 YS2-18l08.p1k chr08 459 291 560601 560769 C 169 89.35 478 reject_low 63 ALIGNMENT 0 YS2-18l08.p1k chr16 362 62 946495 946494 C 301 0.00 478 reject_low 116,119 ALIGNMENT 0 YS2-18l08.q1k chr06 93 62 1116 1115 C 32 0.00 506 reject_low 179,198 ALIGNMENT 0 YS2-18l08.p1k chr10 62 290 2065 2064 F 229 0.00 478 reject_low 155 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946075 946074 C 19 0.00 478 reject_low 125 ALIGNMENT 0 YS2-18l08.q1k chr02 506 209 2279 2278 C 298 0.00 506 reject_low 184,204 ALIGNMENT 0 YS2-18l08.q1k chr13 506 209 1740 1739 C 298 0.00 506 reject_low 53 ALIGNMENT 84 YS2-18l08.q1k chr04 40 205 1530212 1530377 F 166 86.14 506 reject_low 77 ALIGNMENT 0 YS2-18l08.p1k chr06 62 326 893 892 F 265 0.00 478 reject_low 191 ALIGNMENT 0 YS2-18l08.q1k chr05 466 506 575574 575573 F 41 0.00 506 reject_low 23 ALIGNMENT 0 YS2-18l08.p1k chr10 62 362 1669 1668 F 301 0.00 478 reject_low 94 ALIGNMENT 59 YS2-18l08.p1k chr05 459 291 574969 575137 C 169 81.07 478 reject_low 156 ALIGNMENT 0 YS2-18l08.q1k chr10 506 65 1670 1669 C 442 0.00 506 reject_low 257 ALIGNMENT 116 YS2-18l08.q1k chr09 208 40 1722 1890 C 169 92.31 506 reject_low 40 ALIGNMENT 107 YS2-18l08.q1k chr05 208 40 1542 1710 C 169 90.53 506 reject_low 68 ALIGNMENT 0 YS2-18l08.q1k chr12 53 52 1070015 1076353 F 0 0.00 506 reject_low 297 ALIGNMENT 101 YS2-18l08.q1k chr04 40 208 1530248 1530416 F 169 89.35 506 reject_low 47 ALIGNMENT 360 YS2-18l08.q1k chr07 40 465 1089226 1089651 F 426 95.54 506 reject_low 24 ALIGNMENT 0 YS2-18l08.p1k chr12 62 398 1683 1682 F 337 0.00 478 reject_low 190,298,300 ALIGNMENT 84 YS2-18l08.p1k chr12 459 294 1069750 1069915 C 166 86.14 478 reject_low 104 ALIGNMENT 80 YS2-18l08.p1k chr10 291 459 2029 2197 F 169 85.21 478 reject_low 111 ALIGNMENT 95 YS2-18l08.p1k chr10 291 459 1813 1981 F 169 88.17 478 reject_low 62 ALIGNMENT 66 YS2-18l08.q1k chr08 136 40 1651 1747 C 97 91.75 506 reject_low 219 ALIGNMENT 0 YS2-18l08.q1k chr12 65 506 1076689 1076688 F 442 0.00 506 reject_low 271 ALIGNMENT 0 YS2-18l08.q1k chr12 61 62 2190 7328 C 0 0.00 506 reject_low 294 ALIGNMENT 0 YS2-18l08.q1k chr08 209 506 560661 560660 F 298 0.00 506 reject_low 92 ALIGNMENT 68 YS2-18l08.p1k chr08 291 459 1687 1855 F 169 82.84 478 reject_low 146 ALIGNMENT 0 YS2-18l08.q1k chr07 206 506 1089247 1089246 F 301 0.00 506 reject_low 96 ALIGNMENT 95 YS2-18l08.q1k chr02 208 40 1522 1690 C 169 88.17 506 reject_low 118 ALIGNMENT 110 YS2-18l08.q1k chr05 208 40 1614 1782 C 169 91.12 506 reject_low 42 ALIGNMENT 0 YS2-18l08.p1k chr13 62 290 1847 1846 F 229 0.00 478 reject_low 158 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1926 1925 F 19 0.00 478 reject_low 189 ALIGNMENT 113 YS2-18l08.p1k chr12 459 291 1069822 1069990 C 169 91.72 478 reject_low 52 ALIGNMENT 113 YS2-18l08.p1k chr07 459 291 1089190 1089358 C 169 91.72 478 reject_low 49 ALIGNMENT 360 YS2-18l08.p1k chr12 34 459 7069 7494 F 426 95.54 478 reject_low 10 ALIGNMENT 22 YS2-18l08.p1k chr07 320 291 1089077 1089106 C 30 93.33 478 reject_low 265 ALIGNMENT 41 YS2-18l08.p1k chr12 291 405 2079 2193 F 115 81.74 478 reject_low 177 ALIGNMENT 68 YS2-18l08.p1k chr02 302 459 2073 2230 F 158 83.54 478 reject_low 140 ALIGNMENT 0 YS2-18l08.p1k chr05 478 460 575078 575077 C 19 0.00 478 reject_low 78 ALIGNMENT 0 YS2-18l08.q1k chr08 65 506 560841 560840 F 442 0.00 506 reject_low 270 ALIGNMENT 50 YS2-18l08.q1k chr12 40 197 1069642 1069799 F 158 79.75 506 reject_low 172 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 1851 1850 F 19 0.00 478 accept_tel 0 ALIGNMENT 0 YS2-18l08.p1k chr06 460 478 1025 1024 F 19 0.00 478 reject_low 191 ALIGNMENT 0 YS2-18l08.q1k chr09 506 173 1687 1686 C 334 0.00 506 reject_low 164 ALIGNMENT 0 YS2-18l08.q1k chr02 506 209 2171 2170 C 298 0.00 506 reject_low 101,110 ALIGNMENT 0 YS2-18l08.p1k chr15 478 460 1089630 1089629 C 19 0.00 478 reject_low 213 ALIGNMENT 0 YS2-18l08.q1k chr12 93 65 2194 7325 C 29 0.00 506 reject_low 305 ALIGNMENT 0 YS2-18l08.q1k chr06 506 198 941 940 C 309 0.00 506 reject_low 191 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 2197 2196 F 19 0.00 478 reject_low 111 ALIGNMENT 0 YS2-18l08.p1k chr15 478 460 1089558 1089557 C 19 0.00 478 reject_low 25,168 ALIGNMENT 0 YS2-18l08.p1k chr08 478 460 560494 560493 C 19 0.00 478 reject_low 128 ALIGNMENT 0 YS2-18l08.p1k chr05 290 62 575030 575029 C 229 0.00 478 reject_low 237 ALIGNMENT 56 YS2-18l08.q1k chr15 40 208 1089305 1089473 F 169 80.47 506 reject_low 168 ALIGNMENT 0 YS2-18l08.p1k chr05 62 290 1758 1757 F 229 0.00 478 reject_low 189 ALIGNMENT 0 YS2-18l08.q1k chr16 198 506 946159 946158 F 309 0.00 506 reject_low 160 ALIGNMENT 0 YS2-18l08.q1k chr16 506 466 1227 1226 C 41 0.00 506 reject_low 29 ALIGNMENT 21 YS2-18l08.q1k chr15 40 64 1089629 1089653 F 25 96.00 506 reject_low 274 ALIGNMENT 107 YS2-18l08.p1k chr10 291 459 1957 2125 F 169 90.53 478 reject_low 59 ALIGNMENT 62 YS2-18l08.p1k chr09 291 401 1974 2084 F 111 88.29 478 reject_low 169 ALIGNMENT 0 YS2-18l08.p1k chr04 289 62 1530238 1530237 C 228 0.00 478 reject_low 222 ALIGNMENT 51 YS2-18l08.q1k chr12 136 40 7326 7422 C 97 86.60 506 reject_low 190 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 2122 2121 F 19 0.00 478 reject_low 102 ALIGNMENT 0 YS2-18l08.p1k chr05 362 62 575318 575317 C 301 0.00 478 reject_low 23,161 ALIGNMENT 79 YS2-18l08.p1k chr02 290 459 1953 2122 F 170 84.71 478 reject_low 102 ALIGNMENT 0 YS2-18l08.q1k chr14 506 466 1318 1317 C 41 0.00 506 reject_low 28 ALIGNMENT 101 YS2-18l08.p1k chr15 459 291 1089413 1089581 C 169 89.35 478 reject_low 84 ALIGNMENT 0 YS2-18l08.p1k chr12 62 326 1683 1682 F 265 0.00 478 reject_low 281 ALIGNMENT 41 YS2-18l08.p1k chr05 405 291 574915 575029 C 115 81.74 478 reject_low 237 ALIGNMENT 80 YS2-18l08.q1k chr02 208 40 2098 2266 C 169 85.21 506 reject_low 102,107 ALIGNMENT 0 YS2-18l08.p1k chr12 62 290 7506 7505 F 229 0.00 478 reject_low 157 ALIGNMENT 0 YS2-18l08.p1k chr16 62 290 1663 1662 F 229 0.00 478 reject_low 151 ALIGNMENT 81 YS2-18l08.q1k chr14 205 40 1721 1886 C 166 85.54 506 reject_low 99 ALIGNMENT 38 YS2-18l08.q1k chr04 94 208 1530086 1530200 F 115 80.87 506 reject_low 201 ALIGNMENT 0 YS2-18l08.q1k chr05 506 65 1471 1470 C 442 0.00 506 reject_low 254 ALIGNMENT 24 YS2-18l08.p1k chr12 435 459 1683 1707 F 25 100.00 478 reject_low 305 ALIGNMENT 0 YS2-18l08.p1k chr09 460 478 1926 1925 F 19 0.00 478 reject_low 50 ALIGNMENT 0 YS2-18l08.p1k chr08 290 62 560554 560553 C 229 0.00 478 reject_low 252 ALIGNMENT 0 YS2-18l08.q1k chr10 506 214 1881 1880 C 293 0.00 506 reject_low 148 ALIGNMENT 0 YS2-18l08.p1k chr13 460 478 1691 1690 F 19 0.00 478 reject_low 276 ALIGNMENT 0 YS2-18l08.q1k chr05 137 506 575317 575316 F 370 0.00 506 reject_low 210 ALIGNMENT 0 YS2-18l08.q1k chr14 506 206 1686 1685 C 301 0.00 506 reject_low 83 ALIGNMENT 116 YS2-18l08.q1k chr10 208 40 1705 1873 C 169 92.31 506 reject_low 41 ALIGNMENT 0 YS2-18l08.p1k chr08 460 478 1675 1674 F 19 0.00 478 reject_low 261 ALIGNMENT 0 YS2-18l08.p1k chr05 290 62 575138 575137 C 229 0.00 478 reject_low 156 ALIGNMENT 0 YS2-18l08.p1k chr09 460 478 1818 1817 F 19 0.00 478 reject_low 40 ALIGNMENT 57 YS2-18l08.q1k chr16 40 136 946398 946494 F 97 88.66 506 reject_low 185 ALIGNMENT 51 YS2-18l08.q1k chr07 40 136 1089298 1089394 F 97 86.60 506 reject_low 211 ALIGNMENT 51 YS2-18l08.p1k chr16 363 459 1483 1579 F 97 86.60 478 reject_low 182 ALIGNMENT 98 YS2-18l08.p1k chr05 291 459 1686 1854 F 169 88.76 478 reject_low 91 ALIGNMENT 0 YS2-18l08.p1k chr12 406 478 7728 7727 F 73 0.00 478 reject_low 240 ALIGNMENT 50 YS2-18l08.p1k chr04 459 302 1530104 1530261 C 158 79.75 478 reject_low 201 ALIGNMENT 0 YS2-18l08.p1k chr16 290 62 946099 946098 C 229 0.00 478 reject_low 243 ALIGNMENT 0 YS2-18l08.p1k chr09 62 362 1686 1685 F 301 0.00 478 reject_low 93 ALIGNMENT 110 YS2-18l08.p1k chr05 291 459 1578 1746 F 169 91.12 478 reject_low 42 ALIGNMENT 0 YS2-18l08.q1k chr02 506 209 1919 1918 C 298 0.00 506 reject_low 180 ALIGNMENT 51 YS2-18l08.p1k chr12 363 459 7326 7422 F 97 86.60 478 reject_low 181 ALIGNMENT 0 YS2-18l08.q1k chr12 209 506 1069738 1069737 F 298 0.00 506 reject_low 202,302 ALIGNMENT 89 YS2-18l08.q1k chr02 197 40 2145 2302 C 158 87.97 506 reject_low 87 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946147 946146 C 19 0.00 478 reject_low 71 ALIGNMENT 0 YS2-18l08.p1k chr16 437 478 1880 1879 F 42 0.00 478 reject_low 187 ALIGNMENT 0 YS2-18l08.p1k chr09 460 478 1962 1961 F 19 0.00 478 reject_low 72 ALIGNMENT 84 YS2-18l08.q1k chr13 205 40 1778 1943 C 166 86.14 506 reject_low 82 ALIGNMENT 0 YS2-18l08.p1k chr13 62 301 1894 1893 F 240 0.00 478 reject_low 194 ALIGNMENT 0 YS2-18l08.p1k chr04 478 460 1530285 1530284 C 19 0.00 478 reject_low 47 ALIGNMENT 64 YS2-18l08.p1k chr12 290 441 7577 7728 F 152 83.55 478 reject_low 174 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946399 946398 C 19 0.00 478 reject_low 116,119 ALIGNMENT 0 YS2-18l08.q1k chr14 506 198 1802 1801 C 309 0.00 506 reject_low 159 ALIGNMENT 0 YS2-18l08.q1k chr02 506 209 1523 1522 C 298 0.00 506 reject_low 118 ALIGNMENT 101 YS2-18l08.q1k chr12 208 40 7398 7566 C 169 89.35 506 reject_low 39,43,51 ALIGNMENT 82 YS2-18l08.p1k chr09 302 437 1949 2084 F 136 89.71 478 reject_low 130 ALIGNMENT 0 YS2-18l08.p1k chr05 62 290 1542 1541 F 229 0.00 478 reject_low 46 ALIGNMENT 81 YS2-18l08.q1k chr07 40 205 1089082 1089247 F 166 85.54 506 reject_low 96 ALIGNMENT 42 YS2-18l08.p1k chr07 392 302 1089077 1089167 C 91 84.62 478 reject_low 244 ALIGNMENT 0 YS2-18l08.p1k chr10 62 290 1777 1776 F 229 0.00 478 reject_low 73 ALIGNMENT 0 YS2-18l08.p1k chr13 62 290 1703 1702 F 229 0.00 478 reject_low 53 ALIGNMENT 65 YS2-18l08.p1k chr02 291 459 1738 1906 F 169 82.25 478 reject_low 145 ALIGNMENT 0 YS2-18l08.p1k chr02 62 289 1953 1952 F 228 0.00 478 reject_low 102 ALIGNMENT 0 YS2-18l08.p1k chr16 301 62 946304 946303 C 240 0.00 478 reject_low 71 ALIGNMENT 77 YS2-18l08.p1k chr12 453 294 1069720 1069879 C 160 85.62 478 reject_low 134 ALIGNMENT 74 YS2-18l08.q1k chr09 208 40 1866 2034 C 169 84.02 506 reject_low 153 ALIGNMENT 0 YS2-18l08.p1k chr08 478 460 560458 560457 C 19 0.00 478 reject_low 137 ALIGNMENT 107 YS2-18l08.q1k chr05 208 40 1506 1674 C 169 90.53 506 reject_low 67 ALIGNMENT 38 YS2-18l08.p1k chr15 405 291 1089251 1089365 C 115 80.87 478 reject_low 249 ALIGNMENT 0 YS2-18l08.q1k chr12 506 65 1684 1683 C 442 0.00 506 reject_low 258 ALIGNMENT 0 YS2-18l08.q1k chr12 506 209 7363 7362 C 298 0.00 506 reject_low 10 ALIGNMENT 119 YS2-18l08.q1k chr10 208 40 1741 1909 C 169 92.90 506 reject_low 3,37 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946255 946254 C 19 0.00 478 reject_low 58 ALIGNMENT 0 YS2-18l08.p1k chr12 478 406 1069625 1069624 C 73 0.00 478 reject_low 248 ALIGNMENT 0 YS2-18l08.p1k chr08 62 290 1687 1686 F 229 0.00 478 reject_low 146 ALIGNMENT 61 YS2-18l08.q1k chr15 58 209 1089251 1089402 F 152 82.89 506 reject_low 135 ALIGNMENT 0 YS2-18l08.q1k chr13 93 62 2070 2069 C 32 0.00 506 reject_low 175,194 ALIGNMENT 41 YS2-18l08.q1k chr10 208 94 2101 2215 C 115 81.74 506 reject_low 155 ALIGNMENT 0 YS2-18l08.q1k chr02 506 206 1706 1705 C 301 0.00 506 reject_low 147 ALIGNMENT 113 YS2-18l08.q1k chr16 208 40 1519 1687 C 169 91.72 506 reject_low 19 ALIGNMENT 0 YS2-18l08.p1k chr04 478 460 1530249 1530248 C 19 0.00 478 reject_low 77 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 7422 7421 F 19 0.00 478 reject_low 181 ALIGNMENT 0 YS2-18l08.q1k chr04 209 506 1530416 1530415 F 298 0.00 506 reject_low 47 ALIGNMENT 0 YS2-18l08.p1k chr12 478 460 1076342 1076341 C 19 0.00 478 reject_low 296 ALIGNMENT 95 YS2-18l08.p1k chr02 291 459 1522 1690 F 169 88.17 478 reject_low 66 ALIGNMENT 0 YS2-18l08.p1k chr15 301 62 1089427 1089426 C 240 0.00 478 reject_low 203 ALIGNMENT 0 YS2-18l08.p1k chr12 62 293 7473 7472 F 232 0.00 478 reject_low 122 ALIGNMENT 0 YS2-18l08.p1k chr07 293 62 1089284 1089283 C 232 0.00 478 reject_low 96 ALIGNMENT 0 YS2-18l08.p1k chr13 62 290 1955 1954 F 229 0.00 478 reject_low 241 ALIGNMENT 51 YS2-18l08.q1k chr13 136 40 1667 1763 C 97 86.60 506 reject_low 228 ALIGNMENT 0 YS2-18l08.p1k chr13 62 289 1918 1917 F 228 0.00 478 reject_low 175 ALIGNMENT 42 YS2-18l08.p1k chr12 399 459 1683 1743 F 61 91.80 478 reject_low 190,298,300 ALIGNMENT 79 YS2-18l08.q1k chr02 209 40 1953 2122 C 170 84.71 506 reject_low 109 ALIGNMENT 101 YS2-18l08.q1k chr12 40 208 1076449 1076617 F 169 89.35 506|13,0 reject_low 288 ALIGNMENT 101 YS2-18l08.q1k chr15 40 208 1089413 1089581 F 169 89.35 506 reject_low 55 ALIGNMENT 71 YS2-18l08.p1k chr05 291 459 1722 1890 F 169 83.43 478 reject_low 143 ALIGNMENT 0 YS2-18l08.q1k chr12 53 52 1070015 1076317 F 0 0.00 506 reject_low 304 ALIGNMENT 0 YS2-18l08.q1k chr02 506 214 1770 1769 C 293 0.00 506 reject_low 150 ALIGNMENT 68 YS2-18l08.q1k chr08 208 40 1687 1855 C 169 82.84 506 reject_low 115,144 ALIGNMENT 0 YS2-18l08.p1k chr08 290 62 560662 560661 C 229 0.00 478 reject_low 128 ALIGNMENT 53 YS2-18l08.q1k chr05 40 197 574933 575090 F 158 80.38 506 reject_low 156 ALIGNMENT 107 YS2-18l08.p1k chr05 291 459 1542 1710 F 169 90.53 478 reject_low 46 ALIGNMENT 360 YS2-18l08.q1k chr15 40 465 1089485 1089910 F 426 95.54 506 reject_low 25 ALIGNMENT 0 YS2-18l08.p1k chr15 290 62 1089582 1089581 C 229 0.00 478 reject_low 84 ALIGNMENT 357 YS2-18l08.p1k chr12 459 34 1076521 1076946 C 426 95.31 478|12,0 reject_low 1 ALIGNMENT 0 YS2-18l08.q1k chr04 198 506 1530261 1530260 F 309 0.00 506 reject_low 171 ALIGNMENT 107 YS2-18l08.p1k chr05 291 459 1506 1674 F 169 90.53 478 reject_low 45 ALIGNMENT 0 YS2-18l08.q1k chr05 93 62 1945 1944 C 32 0.00 506 reject_low 178,189 ALIGNMENT 53 YS2-18l08.p1k chr12 302 459 2018 2175 F 158 80.38 478|0,12 reject_low 142 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 1945 1944 F 19 0.00 478 reject_low 73 ALIGNMENT 0 YS2-18l08.p1k chr09 366 478 2084 2083 F 113 0.00 478 reject_low 231 ALIGNMENT 0 YS2-18l08.p1k chr02 62 290 2278 2277 F 229 0.00 478 reject_low 251 ALIGNMENT 0 YS2-18l08.q1k chr10 506 209 2102 2101 C 298 0.00 506 reject_low 155 ALIGNMENT 0 YS2-18l08.q1k chr08 209 506 560769 560768 F 298 0.00 506 reject_low 113 ALIGNMENT 110 YS2-18l08.q1k chr05 208 40 1578 1746 C 169 91.12 506 reject_low 8,45,46 ALIGNMENT 0 YS2-18l08.p1k chr14 460 478 1742 1741 F 19 0.00 478 reject_low 17 ALIGNMENT 0 YS2-18l08.p1k chr16 62 289 1734 1733 F 228 0.00 478 reject_low 187 ALIGNMENT 56 YS2-18l08.p1k chr12 459 291 1076341 1076509 C 169 80.47 478 reject_low 296 ALIGNMENT 0 YS2-18l08.q1k chr14 506 65 1575 1574 C 442 0.00 506 reject_low 273 ALIGNMENT 0 YS2-18l08.p1k chr13 460 478 2051 2050 F 19 0.00 478 reject_low 194 ALIGNMENT 98 YS2-18l08.p1k chr12 302 459 1874 2031 F 158 89.87 478|0,12 reject_low 43 ALIGNMENT 0 YS2-18l08.q1k chr12 93 62 7729 7728 C 32 0.00 506 reject_low 174,177,193 ALIGNMENT 41 YS2-18l08.q1k chr12 208 94 2079 2193 C 115 81.74 506 reject_low 305 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 7494 7493 F 19 0.00 478 reject_low 10 ALIGNMENT 387 YS2-18l08.p1k chr09 37 459 1432 1854 F 423 97.87 478 reject_low 2 ALIGNMENT 59 YS2-18l08.p1k chr12 291 459 7506 7674 F 169 81.07 478 reject_low 157 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1746 1745 F 19 0.00 478 reject_low 42 ALIGNMENT 0 YS2-18l08.p1k chr16 460 478 1687 1686 F 19 0.00 478 reject_low 56 ALIGNMENT 47 YS2-18l08.q1k chr02 197 40 1821 1978 C 158 79.11 506 reject_low 216 ALIGNMENT 53 YS2-18l08.p1k chr05 291 459 1758 1926 F 169 79.88 478 reject_low 189 ALIGNMENT 0 YS2-18l08.q1k chr02 506 209 1631 1630 C 298 0.00 506 reject_low 12 ALIGNMENT 306 YS2-18l08.q1k chr06 465 40 636 1061 C 426 91.31 506 reject_low 33 ALIGNMENT 0 YS2-18l08.q1k chr08 506 209 1688 1687 C 298 0.00 506 reject_low 115,144 ALIGNMENT 74 YS2-18l08.q1k chr08 40 208 560493 560661 F 169 84.02 506 reject_low 92 ALIGNMENT 57 YS2-18l08.p1k chr05 363 459 1470 1566 F 97 88.66 478 reject_low 139 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 2086 2085 F 19 0.00 478 reject_low 204 ALIGNMENT 35 YS2-18l08.p1k chr08 405 291 560439 560553 C 115 80.00 478 reject_low 252 ALIGNMENT 65 YS2-18l08.p1k chr05 302 441 1805 1944 F 140 85.00 478 reject_low 178 ALIGNMENT 0 YS2-18l08.p1k chr14 442 478 1976 1975 F 37 0.00 478 reject_low 176 ALIGNMENT 51 YS2-18l08.q1k chr15 40 136 1089557 1089653 F 97 86.60 506 reject_low 213 ALIGNMENT 0 YS2-18l08.p1k chr13 406 478 2069 2068 F 73 0.00 478 reject_low 241 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946327 946326 C 19 0.00 478 reject_low 7 ALIGNMENT 89 YS2-18l08.p1k chr02 302 459 2145 2302 F 158 87.97 478 reject_low 101 ALIGNMENT 0 YS2-18l08.p1k chr15 478 460 1089270 1089269 C 19 0.00 478 reject_low 203 ALIGNMENT 68 YS2-18l08.q1k chr02 208 40 1990 2158 C 169 82.84 506 reject_low 138,145 ALIGNMENT 0 YS2-18l08.p1k chr09 460 478 1890 1889 F 19 0.00 478 reject_low 36 ALIGNMENT 0 YS2-18l08.q1k chr16 210 506 946135 946134 F 297 0.00 506 reject_low 125 ALIGNMENT 0 YS2-18l08.p1k chr08 293 62 560695 560694 C 232 0.00 478 reject_low 92 ALIGNMENT 51 YS2-18l08.q1k chr05 40 136 575221 575317 F 97 86.60 506 reject_low 210 ALIGNMENT 0 YS2-18l08.p1k chr06 460 478 1061 1060 F 19 0.00 478 reject_low 32 ALIGNMENT 0 YS2-18l08.p1k chr08 62 362 1651 1650 F 301 0.00 478 reject_low 144 ALIGNMENT 0 YS2-18l08.p1k chr02 62 301 2217 2216 F 240 0.00 478 reject_low 136 ALIGNMENT 0 YS2-18l08.p1k chr05 478 460 575294 575293 C 19 0.00 478 reject_low 210 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 1870 1869 F 19 0.00 478 reject_low 109 ALIGNMENT 0 YS2-18l08.q1k chr02 506 210 1846 1845 C 297 0.00 506 reject_low 186 ALIGNMENT 0 YS2-18l08.q1k chr04 209 506 1530308 1530307 F 298 0.00 506 reject_low 166 ALIGNMENT 104 YS2-18l08.p1k chr02 291 459 1630 1798 F 169 89.94 478 reject_low 60 ALIGNMENT 0 YS2-18l08.q1k chr16 65 506 946494 946493 F 442 0.00 506 reject_low 259 ALIGNMENT 0 YS2-18l08.p1k chr08 293 62 560731 560730 C 232 0.00 478 reject_low 61 ALIGNMENT 65 YS2-18l08.p1k chr06 302 441 976 1115 F 140 85.00 478 reject_low 179 ALIGNMENT 56 YS2-18l08.q1k chr12 40 208 1069678 1069846 F 169 80.47 506 reject_low 167 ALIGNMENT 41 YS2-18l08.q1k chr12 208 94 7614 7728 C 115 81.74 506 reject_low 174,177,193 ALIGNMENT 51 YS2-18l08.p1k chr12 459 363 1076593 1076689 C 97 86.60 478 reject_low 35,286,288,292,293,297 ALIGNMENT 0 YS2-18l08.q1k chr06 506 173 894 893 C 334 0.00 506 reject_low 233 ALIGNMENT 360 YS2-18l08.p1k chr08 459 34 560673 561098 C 426 95.54 478 reject_low 9 ALIGNMENT 21 YS2-18l08.q1k chr12 40 64 1076665 1076689 F 25 96.00 506 reject_low 271 ALIGNMENT 53 YS2-18l08.p1k chr16 302 459 1710 1867 F 158 80.38 478 reject_low 199 ALIGNMENT 0 YS2-18l08.p1k chr08 290 62 560806 560805 C 229 0.00 478 reject_low 44 ALIGNMENT 0 YS2-18l08.p1k chr12 62 290 2079 2078 F 229 0.00 478 reject_low 177 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946111 946110 C 19 0.00 478 reject_low 90 ALIGNMENT 0 YS2-18l08.q1k chr05 65 506 575317 575316 F 442 0.00 506 reject_low 268 ALIGNMENT 0 YS2-18l08.p1k chr08 478 460 560638 560637 C 19 0.00 478 reject_low 44 ALIGNMENT 62 YS2-18l08.q1k chr08 208 40 1723 1891 C 169 81.66 506 reject_low 146 ALIGNMENT 0 YS2-18l08.p1k chr04 478 460 1530141 1530140 C 19 0.00 478 reject_low 171 ALIGNMENT 41 YS2-18l08.p1k chr05 291 405 1830 1944 F 115 81.74 478 reject_low 236 ALIGNMENT 77 YS2-18l08.q1k chr12 46 205 1076383 1076542 F 160 85.62 506|10,0 reject_low 293 ALIGNMENT 0 YS2-18l08.q1k chr07 62 106 1089077 1089076 F 45 0.00 506 reject_low 149,197 ALIGNMENT 0 YS2-18l08.q1k chr04 137 506 1530488 1530487 F 370 0.00 506 reject_low 209 ALIGNMENT 0 YS2-18l08.q1k chr12 209 506 1076401 1076400 F 298 0.00 506 reject_low 306 ALIGNMENT 0 YS2-18l08.q1k chr05 198 506 575090 575089 F 309 0.00 506 reject_low 156 ALIGNMENT 93 YS2-18l08.p1k chr08 459 294 560529 560694 C 166 87.95 478 reject_low 92 ALIGNMENT 59 YS2-18l08.p1k chr14 291 459 1754 1922 F 169 81.07 478 reject_low 159 ALIGNMENT 360 YS2-18l08.q1k chr12 40 465 1076521 1076946 F 426 95.54 506|13,0 reject_low 35 ALIGNMENT 0 YS2-18l08.p1k chr12 448 447 1912 7338 F 0 0.00 478 reject_low 39 ALIGNMENT 92 YS2-18l08.q1k chr10 208 40 1777 1945 C 169 87.57 506 reject_low 94 ALIGNMENT 0 YS2-18l08.p1k chr02 62 289 1845 1844 F 228 0.00 478 reject_low 180 ALIGNMENT 59 YS2-18l08.p1k chr16 459 291 946038 946206 C 169 81.07 478 reject_low 160 ALIGNMENT 0 YS2-18l08.p1k chr16 62 293 1630 1629 F 232 0.00 478 reject_low 131 ALIGNMENT 21 YS2-18l08.p1k chr12 435 459 7326 7350 F 25 96.00 478|13,0 reject_low 39,43,65,75,112,142,177 ALIGNMENT 81 YS2-18l08.q1k chr16 40 205 946074 946239 F 166 85.54 506 reject_low 90 ALIGNMENT 0 YS2-18l08.p1k chr16 460 478 1795 1794 F 19 0.00 478 reject_low 131 ALIGNMENT 0 YS2-18l08.q1k chr12 124 125 7266 1838 C 0 0.00 506 reject_low 281 ALIGNMENT 0 YS2-18l08.q1k chr09 506 209 1723 1722 C 298 0.00 506 reject_low 40 ALIGNMENT 41 YS2-18l08.q1k chr13 208 94 1955 2069 C 115 81.74 506 reject_low 175,194 ALIGNMENT 0 YS2-18l08.q1k chr12 137 506 1070026 1070025 F 370 0.00 506 reject_low 299 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946003 946002 C 19 0.00 478 reject_low 196 ALIGNMENT 53 YS2-18l08.p1k chr16 459 302 946002 946159 C 158 80.38 478 reject_low 196 ALIGNMENT 0 YS2-18l08.p1k chr12 478 460 1069787 1069786 C 19 0.00 478 reject_low 81 ALIGNMENT 61 YS2-18l08.p1k chr12 441 290 1076287 1076438 C 152 82.89 478|3,0 reject_low 295 ALIGNMENT 41 YS2-18l08.q1k chr05 94 208 574915 575029 F 115 81.74 506 reject_low 192 ALIGNMENT 24 YS2-18l08.p1k chr05 435 459 1470 1494 F 25 100.00 478 reject_low 260 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 2374 2373 F 19 0.00 478 reject_low 136 ALIGNMENT 0 YS2-18l08.p1k chr15 478 454 1089348 1089347 C 25 0.00 478 reject_low 135 ALIGNMENT 0 YS2-18l08.q1k chr12 209 506 1076509 1076508 F 298 0.00 506 reject_low 297 ALIGNMENT 51 YS2-18l08.q1k chr08 40 136 560745 560841 F 97 86.60 506 reject_low 212 ALIGNMENT 0 YS2-18l08.p1k chr12 448 447 2056 7338 F 0 0.00 478 reject_low 65 ALIGNMENT 42 YS2-18l08.p1k chr05 399 459 1470 1530 F 61 91.80 478 reject_low 188 ALIGNMENT 71 YS2-18l08.q1k chr02 197 40 2217 2374 C 158 84.18 506 reject_low 127,140 ALIGNMENT 119 YS2-18l08.p1k chr09 291 459 1758 1926 F 169 92.90 478 reject_low 50 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 2017 2016 F 19 0.00 478 reject_low 117 ALIGNMENT 0 YS2-18l08.q1k chr09 133 62 2085 2084 C 72 0.00 506 reject_low 169 ALIGNMENT 0 YS2-18l08.p1k chr13 460 478 1907 1906 F 19 0.00 478 reject_low 82 ALIGNMENT 74 YS2-18l08.q1k chr02 208 40 2170 2338 C 169 84.02 506 reject_low 101,110 ALIGNMENT 0 YS2-18l08.q1k chr16 506 209 1556 1555 C 298 0.00 506 reject_low 56 ALIGNMENT 64 YS2-18l08.q1k chr16 58 209 945984 946135 F 152 83.55 506 reject_low 125 ALIGNMENT 96 YS2-18l08.p1k chr02 294 459 1597 1762 F 166 88.55 478 reject_low 70 ALIGNMENT 0 YS2-18l08.p1k chr05 406 478 1944 1943 F 73 0.00 478 reject_low 236 ALIGNMENT 0 YS2-18l08.q1k chr08 506 101 1652 1651 C 406 0.00 506 reject_low 235 ALIGNMENT 81 YS2-18l08.p1k chr05 459 294 575005 575170 C 166 85.54 478 reject_low 121 ALIGNMENT 59 YS2-18l08.p1k chr02 286 459 1769 1942 F 174 80.46 478 reject_low 132,141 ALIGNMENT 51 YS2-18l08.q1k chr14 136 40 1574 1670 C 97 86.60 506 reject_low 229 ALIGNMENT 62 YS2-18l08.p1k chr08 291 459 1723 1891 F 169 81.66 478 reject_low 170 ALIGNMENT 84 YS2-18l08.q1k chr12 40 205 1076413 1076578 F 166 86.14 506|13,0 reject_low 292 ALIGNMENT 0 YS2-18l08.p1k chr16 62 293 1594 1593 F 232 0.00 478 reject_low 100 ALIGNMENT 0 YS2-18l08.p1k chr07 290 62 1089359 1089358 C 229 0.00 478 reject_low 49 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 2089 2088 F 19 0.00 478 reject_low 69 ALIGNMENT 0 YS2-18l08.q1k chr02 506 198 2146 2145 C 309 0.00 506 reject_low 87 ALIGNMENT 101 YS2-18l08.p1k chr12 459 291 1069786 1069954 C 169 89.35 478 reject_low 81 ALIGNMENT 0 YS2-18l08.p1k chr02 62 290 1558 1557 F 229 0.00 478 reject_low 76 ALIGNMENT 0 YS2-18l08.q1k chr12 252 253 7138 1638 C 0 0.00 506 reject_low 34 ALIGNMENT 0 YS2-18l08.p1k chr06 442 478 1115 1114 F 37 0.00 478 reject_low 179 ALIGNMENT 0 YS2-18l08.p1k chr12 478 460 1069859 1069858 C 19 0.00 478 reject_low 16 ALIGNMENT 0 YS2-18l08.q1k chr04 206 506 1530341 1530340 F 301 0.00 506 reject_low 103 ALIGNMENT 0 YS2-18l08.p1k chr09 460 478 2070 2069 F 19 0.00 478 reject_low 126 ALIGNMENT 0 YS2-18l08.p1k chr12 293 62 1076579 1076578 C 232 0.00 478 reject_low 285 ALIGNMENT 0 YS2-18l08.q1k chr04 209 506 1530200 1530199 F 298 0.00 506 reject_low 201 ALIGNMENT 0 YS2-18l08.q1k chr10 506 463 1416 1415 C 44 0.00 506 reject_low 5 ALIGNMENT 0 YS2-18l08.p1k chr12 447 448 1070014 1076316 C 0 0.00 478 reject_low 299 ALIGNMENT 0 YS2-18l08.p1k chr15 478 460 1089414 1089413 C 19 0.00 478 reject_low 84 ALIGNMENT 0 YS2-18l08.q1k chr05 506 209 1723 1722 C 298 0.00 506 reject_low 91,114 ALIGNMENT 0 YS2-18l08.p1k chr06 62 301 940 939 F 240 0.00 478 reject_low 198 ALIGNMENT 21 YS2-18l08.p1k chr04 459 435 1530464 1530488 C 25 96.00 478 reject_low 209 ALIGNMENT 0 YS2-18l08.q1k chr02 506 209 1739 1738 C 298 0.00 506 reject_low 152 ALIGNMENT 0 YS2-18l08.p1k chr12 362 62 1070027 1070026 C 301 0.00 478 reject_low 167 ALIGNMENT 53 YS2-18l08.q1k chr14 197 40 1801 1958 C 158 80.38 506 reject_low 159 ALIGNMENT 74 YS2-18l08.p1k chr08 459 291 560493 560661 C 169 84.02 478 reject_low 128 ALIGNMENT 0 YS2-18l08.q1k chr16 506 209 1520 1519 C 298 0.00 506 reject_low 19 ALIGNMENT 0 YS2-18l08.p1k chr08 478 460 560818 560817 C 19 0.00 478 reject_low 212,225 ALIGNMENT 59 YS2-18l08.q1k chr12 208 40 7506 7674 C 169 81.07 506 reject_low 142 ALIGNMENT 113 YS2-18l08.p1k chr05 459 291 575113 575281 C 169 91.72 478 reject_low 48 ALIGNMENT 0 YS2-18l08.p1k chr02 62 362 1486 1485 F 301 0.00 478 reject_low 118,129,147,150,152 ALIGNMENT 0 YS2-18l08.q1k chr04 206 506 1530377 1530376 F 301 0.00 506 reject_low 77 ALIGNMENT 0 YS2-18l08.q1k chr09 506 463 1433 1432 C 44 0.00 506 reject_low 4 ALIGNMENT 35 YS2-18l08.q1k chr08 94 208 560439 560553 F 115 80.00 506 reject_low 225 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 2161 2160 F 19 0.00 478 reject_low 89 ALIGNMENT 0 YS2-18l08.q1k chr12 124 125 7266 1910 C 0 0.00 506 reject_low 283 ALIGNMENT 0 YS2-18l08.p1k chr12 62 290 1719 1718 F 229 0.00 478 reject_low 284 ALIGNMENT 0 YS2-18l08.p1k chr12 62 290 7614 7613 F 229 0.00 478 reject_low 240 ALIGNMENT 0 YS2-18l08.q1k chr10 506 209 2030 2029 C 298 0.00 506 reject_low 89 ALIGNMENT 0 YS2-18l08.q1k chr15 206 506 1089506 1089505 F 301 0.00 506 reject_low 105 ALIGNMENT 0 YS2-18l08.p1k chr09 62 434 1686 1685 F 373 0.00 478 reject_low 262 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 1834 1833 F 19 0.00 478 reject_low 87 ALIGNMENT 84 YS2-18l08.p1k chr12 294 459 7437 7602 F 166 86.14 478 reject_low 97 ALIGNMENT 113 YS2-18l08.q1k chr07 40 208 1089190 1089358 F 169 91.72 506 reject_low 15 ALIGNMENT 0 YS2-18l08.p1k chr16 62 301 1710 1709 F 240 0.00 478 reject_low 199 ALIGNMENT 52 YS2-18l08.q1k chr02 209 58 1845 1996 C 152 80.92 506 reject_low 186 ALIGNMENT 0 YS2-18l08.p1k chr16 62 290 1771 1770 F 229 0.00 478 reject_low 250 ALIGNMENT 64 YS2-18l08.p1k chr12 290 441 2042 2193 F 152 83.55 478|0,3 reject_low 112 ALIGNMENT 0 YS2-18l08.q1k chr09 506 198 2022 2021 C 309 0.00 506 reject_low 169 ALIGNMENT 0 YS2-18l08.p1k chr12 444 445 1070017 1076391 C 0 0.00 478 reject_low 287 ALIGNMENT 0 YS2-18l08.p1k chr02 62 290 2026 2025 F 229 0.00 478 reject_low 107 ALIGNMENT 0 YS2-18l08.q1k chr04 62 93 1530086 1530085 F 32 0.00 506 reject_low 201 ALIGNMENT 0 YS2-18l08.q1k chr10 506 209 1958 1957 C 298 0.00 506 reject_low 38 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 7638 7637 F 19 0.00 478 reject_low 122 ALIGNMENT 0 YS2-18l08.q1k chr10 506 209 1778 1777 C 298 0.00 506 reject_low 94 ALIGNMENT 0 YS2-18l08.q1k chr05 506 209 1507 1506 C 298 0.00 506 reject_low 67 ALIGNMENT 0 YS2-18l08.p1k chr14 62 434 1574 1573 F 373 0.00 478 reject_low 277 ALIGNMENT 0 YS2-18l08.q1k chr08 506 198 1807 1806 C 309 0.00 506 reject_low 214 ALIGNMENT 84 YS2-18l08.p1k chr13 294 459 1778 1943 F 166 86.14 478 reject_low 98 ALIGNMENT 0 YS2-18l08.q1k chr16 506 209 1664 1663 C 298 0.00 506 reject_low 131 ALIGNMENT 56 YS2-18l08.q1k chr04 40 208 1530140 1530308 F 169 80.47 506 reject_low 166 ALIGNMENT 0 YS2-18l08.p1k chr02 62 434 1486 1485 F 373 0.00 478 reject_low 216 ALIGNMENT 75 YS2-18l08.q1k chr02 205 40 1705 1870 C 166 84.34 506 reject_low 147 ALIGNMENT 0 YS2-18l08.p1k chr02 62 290 1522 1521 F 229 0.00 478 reject_low 66 ALIGNMENT 0 YS2-18l08.q1k chr10 506 198 1933 1932 C 309 0.00 506 reject_low 62 ALIGNMENT 0 YS2-18l08.q1k chr16 173 506 946494 946493 F 334 0.00 506 reject_low 116 ALIGNMENT 0 YS2-18l08.p1k chr04 293 62 1530342 1530341 C 232 0.00 478 reject_low 133 ALIGNMENT 0 YS2-18l08.p1k chr07 301 62 1089168 1089167 C 240 0.00 478 reject_low 244 ALIGNMENT 21 YS2-18l08.p1k chr12 459 435 1076665 1076689 C 25 96.00 478 reject_low 303,304,306 ALIGNMENT 0 YS2-18l08.p1k chr07 478 460 1089083 1089082 C 19 0.00 478 reject_low 149 ALIGNMENT 0 YS2-18l08.q1k chr08 506 65 1652 1651 C 442 0.00 506 reject_low 255 ALIGNMENT 0 YS2-18l08.p1k chr12 434 406 1070027 1076286 C 29 0.00 478 reject_low 302 ALIGNMENT 51 YS2-18l08.p1k chr08 459 363 560745 560841 C 97 86.60 478 reject_low 20,113 ALIGNMENT 0 YS2-18l08.p1k chr10 62 290 1741 1740 F 229 0.00 478 reject_low 38 ALIGNMENT 0 YS2-18l08.p1k chr02 62 290 1918 1917 F 229 0.00 478 reject_low 204 ALIGNMENT 89 YS2-18l08.p1k chr16 459 291 946110 946278 C 169 86.98 478 reject_low 90 ALIGNMENT 0 YS2-18l08.p1k chr12 478 442 1069625 1069624 C 37 0.00 478 reject_low 223 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 1942 1941 F 19 0.00 478 reject_low 132,141 ALIGNMENT 0 YS2-18l08.p1k chr12 448 447 2164 7338 F 0 0.00 478 reject_low 142 ALIGNMENT 0 YS2-18l08.q1k chr04 65 506 1530488 1530487 F 442 0.00 506 reject_low 267 ALIGNMENT 92 YS2-18l08.p1k chr10 291 459 1777 1945 F 169 87.57 478 reject_low 73 ALIGNMENT 0 YS2-18l08.p1k chr02 62 301 2073 2072 F 240 0.00 478 reject_low 140 ALIGNMENT 44 YS2-18l08.p1k chr08 291 441 1759 1909 F 151 79.47 478 reject_low 214 ALIGNMENT 84 YS2-18l08.q1k chr05 40 205 575041 575206 F 166 86.14 506 reject_low 78 ALIGNMENT 0 YS2-18l08.p1k chr10 62 290 1957 1956 F 229 0.00 478 reject_low 59 ALIGNMENT 113 YS2-18l08.p1k chr14 291 459 1610 1778 F 169 91.72 478 reject_low 54 ALIGNMENT 0 YS2-18l08.q1k chr16 506 210 1735 1734 C 297 0.00 506 reject_low 151 ALIGNMENT 360 YS2-18l08.p1k chr13 34 459 1410 1835 F 426 95.54 478 reject_low 11 ALIGNMENT 35 YS2-18l08.p1k chr02 291 405 2278 2392 F 115 80.00 478 reject_low 251 ALIGNMENT 101 YS2-18l08.q1k chr08 40 208 560601 560769 F 169 89.35 506 reject_low 113 ALIGNMENT 113 YS2-18l08.q1k chr14 208 40 1610 1778 C 169 91.72 506 reject_low 17 ALIGNMENT 71 YS2-18l08.q1k chr09 213 40 1897 2070 C 174 82.76 506 reject_low 106 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946039 946038 C 19 0.00 478 reject_low 160 ALIGNMENT 0 YS2-18l08.p1k chr08 62 398 1651 1650 F 337 0.00 478 reject_low 200 ALIGNMENT 0 YS2-18l08.p1k chr12 293 62 1076543 1076542 C 232 0.00 478 reject_low 287 ALIGNMENT 93 YS2-18l08.p1k chr12 327 459 1683 1815 F 133 92.48 478 reject_low 281 ALIGNMENT 53 YS2-18l08.q1k chr12 197 40 2018 2175 C 158 80.38 506|79,0 reject_low 300 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 7530 7529 F 19 0.00 478 reject_low 51 ALIGNMENT 0 YS2-18l08.q1k chr02 506 198 2218 2217 C 309 0.00 506 reject_low 127,140 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 1959 1958 F 19 0.00 478 reject_low 283 ALIGNMENT 0 YS2-18l08.p1k chr12 448 447 2020 7338 F 0 0.00 478 reject_low 43 ALIGNMENT 0 YS2-18l08.p1k chr05 301 62 575091 575090 C 240 0.00 478 reject_low 192 ALIGNMENT 0 YS2-18l08.q1k chr04 209 506 1530452 1530451 F 298 0.00 506 reject_low 13 ALIGNMENT 0 YS2-18l08.q1k chr16 506 209 1772 1771 C 298 0.00 506 reject_low 187,199 ALIGNMENT 53 YS2-18l08.q1k chr07 76 208 1089082 1089214 F 133 82.71 506 reject_low 206 ALIGNMENT 92 YS2-18l08.p1k chr09 291 459 1794 1962 F 169 87.57 478 reject_low 72 ALIGNMENT 0 YS2-18l08.q1k chr12 70 71 7320 1712 C 0 0.00 506 reject_low 308 ALIGNMENT 84 YS2-18l08.p1k chr07 459 294 1089118 1089283 C 166 86.14 478 reject_low 96 ALIGNMENT 0 YS2-18l08.p1k chr12 478 460 1069931 1069930 C 19 0.00 478 reject_low 167 ALIGNMENT 0 YS2-18l08.q1k chr10 506 137 1670 1669 C 370 0.00 506 reject_low 208 ALIGNMENT 77 YS2-18l08.q1k chr15 46 205 1089347 1089506 F 160 85.62 506 reject_low 105 ALIGNMENT 363 YS2-18l08.q1k chr12 465 40 7069 7494 C 426 95.77 506 accept_tel 0 ALIGNMENT 50 YS2-18l08.p1k chr12 459 302 1076305 1076462 C 158 79.75 478|12,0 reject_low 299 ALIGNMENT 0 YS2-18l08.q1k chr16 209 506 946386 946385 F 298 0.00 506 reject_low 86 ALIGNMENT 21 YS2-18l08.q1k chr02 64 40 1486 1510 C 25 96.00 506 reject_low 266 ALIGNMENT 0 YS2-18l08.p1k chr08 460 478 1783 1782 F 19 0.00 478 reject_low 115 ALIGNMENT 0 YS2-18l08.p1k chr04 290 62 1530309 1530308 C 229 0.00 478 reject_low 171 ALIGNMENT 104 YS2-18l08.p1k chr16 459 291 946254 946422 C 169 89.94 478 reject_low 58 ALIGNMENT 0 YS2-18l08.p1k chr09 402 478 2084 2083 F 77 0.00 478 reject_low 169 ALIGNMENT 0 YS2-18l08.p1k chr12 448 447 2092 7338 F 0 0.00 478 reject_low 75 ALIGNMENT 113 YS2-18l08.p1k chr16 291 459 1519 1687 F 169 91.72 478 reject_low 56 ALIGNMENT 0 YS2-18l08.p1k chr16 401 478 1880 1879 F 78 0.00 478 reject_low 250 ALIGNMENT 41 YS2-18l08.p1k chr10 291 405 2101 2215 F 115 81.74 478 reject_low 239 ALIGNMENT 0 YS2-18l08.p1k chr15 478 406 1089252 1089251 C 73 0.00 478 reject_low 249 ALIGNMENT 0 YS2-18l08.q1k chr09 506 209 1831 1830 C 298 0.00 506 reject_low 50,72 ALIGNMENT 53 YS2-18l08.q1k chr05 208 40 1758 1926 C 169 79.88 506 reject_low 188 ALIGNMENT 369 YS2-18l08.q1k chr05 465 40 1213 1638 C 426 96.24 506 reject_low 21 ALIGNMENT 24 YS2-18l08.p1k chr09 435 459 1686 1710 F 25 100.00 478 reject_low 262 ALIGNMENT 0 YS2-18l08.p1k chr05 478 460 575222 575221 C 19 0.00 478 reject_low 23,161 ALIGNMENT 113 YS2-18l08.q1k chr08 40 208 560637 560805 F 169 91.72 506 reject_low 9 ALIGNMENT 0 YS2-18l08.q1k chr12 206 506 1069879 1069878 F 301 0.00 506 reject_low 104,287 ALIGNMENT 360 YS2-18l08.q1k chr12 40 465 1069858 1070283 F 426 95.54 506 reject_low 1 ALIGNMENT 68 YS2-18l08.p1k chr02 291 441 2242 2392 F 151 84.77 478 reject_low 184 ALIGNMENT 81 YS2-18l08.p1k chr14 294 459 1721 1886 F 166 85.54 478 reject_low 124 ALIGNMENT 0 YS2-18l08.p1k chr13 460 478 1871 1870 F 19 0.00 478 reject_low 53 ALIGNMENT 0 YS2-18l08.q1k chr02 506 466 1230 1229 C 41 0.00 506 reject_low 26 ALIGNMENT 21 YS2-18l08.p1k chr12 459 435 1070002 1070026 C 25 96.00 478|0,13 reject_low 1,279,280,285,287,295,299,302 ALIGNMENT 0 YS2-18l08.p1k chr10 62 290 1849 1848 F 229 0.00 478 reject_low 117 ALIGNMENT 29 YS2-18l08.q1k chr08 197 94 1806 1909 C 104 78.85 506 reject_low 214 ALIGNMENT 64 YS2-18l08.q1k chr12 209 58 7577 7728 C 152 83.55 506 reject_low 112,122 ALIGNMENT 101 YS2-18l08.p1k chr16 459 302 946146 946303 C 158 90.51 478 reject_low 71 ALIGNMENT 0 YS2-18l08.p1k chr10 62 326 1669 1668 F 265 0.00 478 reject_low 41 ALIGNMENT 0 YS2-18l08.p1k chr02 442 478 1996 1995 F 37 0.00 478 reject_low 180 ALIGNMENT 0 YS2-18l08.p1k chr08 460 478 1819 1818 F 19 0.00 478 reject_low 30 ALIGNMENT 0 YS2-18l08.p1k chr14 62 362 1574 1573 F 301 0.00 478 reject_low 163 ALIGNMENT 0 YS2-18l08.p1k chr08 434 62 560842 560841 C 373 0.00 478 reject_low 212,225 ALIGNMENT 0 YS2-18l08.q1k chr12 206 506 1069915 1069914 F 301 0.00 506 reject_low 81,285 ALIGNMENT 39 YS2-18l08.q1k chr09 100 40 1686 1746 C 61 90.16 506 reject_low 245 ALIGNMENT 50 YS2-18l08.p1k chr15 459 302 1089269 1089426 C 158 79.75 478 reject_low 203 ALIGNMENT 0 YS2-18l08.p1k chr02 62 289 1881 1880 F 228 0.00 478 reject_low 138 ALIGNMENT 59 YS2-18l08.q1k chr05 40 208 574969 575137 F 169 81.07 506 reject_low 161 ALIGNMENT 363 YS2-18l08.q1k chr02 465 40 1229 1654 C 426 95.77 506 reject_low 26 ALIGNMENT 0 YS2-18l08.q1k chr12 124 125 7266 1874 C 0 0.00 506 reject_low 284 ALIGNMENT 0 YS2-18l08.q1k chr12 506 209 2080 2079 C 298 0.00 506 reject_low 305 ALIGNMENT 81 YS2-18l08.p1k chr07 459 294 1089082 1089247 C 166 85.54 478 reject_low 149 ALIGNMENT 0 YS2-18l08.p1k chr15 289 62 1089403 1089402 C 228 0.00 478 reject_low 224 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 2266 2265 F 19 0.00 478 reject_low 110 ALIGNMENT 369 YS2-18l08.p1k chr12 34 459 1426 1851 F 426 96.24 478 accept_tel 0 ALIGNMENT 0 YS2-18l08.p1k chr16 289 62 946136 946135 C 228 0.00 478 reject_low 221 ALIGNMENT 0 YS2-18l08.q1k chr07 466 506 1089651 1089650 F 41 0.00 506 reject_low 24 ALIGNMENT 0 YS2-18l08.q1k chr13 506 206 1779 1778 C 301 0.00 506 reject_low 82 ALIGNMENT 0 YS2-18l08.p1k chr09 460 478 1782 1781 F 19 0.00 478 reject_low 93 ALIGNMENT 24 YS2-18l08.q1k chr08 64 40 1651 1675 C 25 100.00 506 reject_low 255 ALIGNMENT 81 YS2-18l08.q1k chr12 205 40 7473 7638 C 166 85.54 506 reject_low 97 ALIGNMENT 0 YS2-18l08.q1k chr09 506 137 1687 1686 C 370 0.00 506 reject_low 207 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 1693 1692 F 19 0.00 478 reject_low 263 ALIGNMENT 0 YS2-18l08.p1k chr12 439 438 2191 7329 F 0 0.00 478 reject_low 112 ALIGNMENT 51 YS2-18l08.p1k chr12 459 363 1069930 1070026 C 97 86.60 478 reject_low 167 ALIGNMENT 0 YS2-18l08.q1k chr08 209 506 560805 560804 F 298 0.00 506 reject_low 9 ALIGNMENT 82 YS2-18l08.q1k chr09 197 62 1949 2084 C 136 89.71 506 reject_low 88 ALIGNMENT 0 YS2-18l08.q1k chr16 209 506 946350 946349 F 298 0.00 506 reject_low 64 ALIGNMENT 45 YS2-18l08.q1k chr06 172 40 893 1025 C 133 80.45 506 reject_low 233 ALIGNMENT 0 YS2-18l08.p1k chr16 62 290 1519 1518 F 229 0.00 478 reject_low 56 ALIGNMENT 21 YS2-18l08.p1k chr02 435 459 1486 1510 F 25 96.00 478 reject_low 216 ALIGNMENT 0 YS2-18l08.p1k chr12 301 62 1076463 1076462 C 240 0.00 478 reject_low 299 ALIGNMENT 0 YS2-18l08.p1k chr16 460 478 1579 1578 F 19 0.00 478 reject_low 182 ALIGNMENT 0 YS2-18l08.p1k chr12 290 62 1069991 1069990 C 229 0.00 478 reject_low 52 ALIGNMENT 0 YS2-18l08.p1k chr13 460 478 1943 1942 F 19 0.00 478 reject_low 98 ALIGNMENT 0 YS2-18l08.p1k chr08 62 326 1651 1650 F 265 0.00 478 reject_low 115 ALIGNMENT 61 YS2-18l08.p1k chr04 441 290 1530086 1530237 C 152 82.89 478 reject_low 222 ALIGNMENT 74 YS2-18l08.p1k chr10 291 459 1849 2017 F 169 84.02 478 reject_low 117 ALIGNMENT 0 YS2-18l08.q1k chr07 210 506 1089143 1089142 F 297 0.00 506 reject_low 218 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1494 1493 F 19 0.00 478 reject_low 260 ALIGNMENT 38 YS2-18l08.p1k chr12 405 291 1069624 1069738 C 115 80.87 478 reject_low 248 ALIGNMENT 0 YS2-18l08.p1k chr12 478 460 1076594 1076593 C 19 0.00 478 reject_low 35,286,288,292,293,297 ALIGNMENT 0 YS2-18l08.p1k chr07 290 62 1089107 1089106 C 229 0.00 478 reject_low 265 ALIGNMENT 92 YS2-18l08.q1k chr09 208 40 1794 1962 C 169 87.57 506 reject_low 93 ALIGNMENT 0 YS2-18l08.q1k chr12 118 119 7272 1952 C 0 0.00 506 reject_low 282 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 1654 1653 F 19 0.00 478 reject_low 12 ALIGNMENT 0 YS2-18l08.p1k chr10 62 285 1880 1879 F 224 0.00 478 reject_low 108 ALIGNMENT 21 YS2-18l08.p1k chr07 459 435 1089370 1089394 C 25 96.00 478 reject_low 206,211,218 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 1909 1908 F 19 0.00 478 reject_low 38 ALIGNMENT 21 YS2-18l08.q1k chr07 40 64 1089370 1089394 F 25 96.00 506 reject_low 269 ALIGNMENT 75 YS2-18l08.q1k chr09 136 40 1686 1782 C 97 94.85 506 reject_low 207 ALIGNMENT 0 YS2-18l08.p1k chr12 62 362 1683 1682 F 301 0.00 478 reject_low 289,290,291 ALIGNMENT 0 YS2-18l08.q1k chr09 506 65 1687 1686 C 442 0.00 506 reject_low 256 ALIGNMENT 41 YS2-18l08.q1k chr05 208 94 1830 1944 C 115 81.74 506 reject_low 178,189 ALIGNMENT 0 YS2-18l08.p1k chr15 478 460 1089486 1089485 C 19 0.00 478 reject_low 18 ALIGNMENT 0 YS2-18l08.p1k chr12 62 301 2018 2017 F 240 0.00 478 reject_low 142 ALIGNMENT 390 YS2-18l08.q1k chr10 462 40 1415 1837 C 423 98.11 506 reject_low 5 ALIGNMENT 0 YS2-18l08.p1k chr12 290 62 1076654 1076653 C 229 0.00 478 reject_low 279 ALIGNMENT 0 YS2-18l08.p1k chr02 62 293 1597 1596 F 232 0.00 478 reject_low 70 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 1765 1764 F 19 0.00 478 reject_low 94 ALIGNMENT 0 YS2-18l08.p1k chr05 293 62 575207 575206 C 232 0.00 478 reject_low 95 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 7710 7709 F 19 0.00 478 reject_low 193 ALIGNMENT 84 YS2-18l08.p1k chr16 294 459 1594 1759 F 166 86.14 478 reject_low 100 ALIGNMENT 93 YS2-18l08.q1k chr16 40 172 946362 946494 F 133 92.48 506 reject_low 116 ALIGNMENT 21 YS2-18l08.q1k chr12 64 40 7326 7350 C 25 96.00 506|3,31 reject_low 34,281,282,283,284,289,290,291,294,298,300,301,305,307,308 ALIGNMENT 0 YS2-18l08.p1k chr12 478 460 1069751 1069750 C 19 0.00 478 reject_low 104 ALIGNMENT 93 YS2-18l08.q1k chr12 172 40 1683 1815 C 133 92.48 506|66,0 reject_low 301 ALIGNMENT 0 YS2-18l08.p1k chr09 62 290 1866 1865 F 229 0.00 478 reject_low 106 ALIGNMENT 0 YS2-18l08.p1k chr12 447 448 1070014 1076532 C 0 0.00 478 reject_low 1 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 1690 1689 F 19 0.00 478 reject_low 66 ALIGNMENT 101 YS2-18l08.p1k chr12 459 291 1076449 1076617 C 169 89.35 478|12,0 reject_low 280 ALIGNMENT 35 YS2-18l08.q1k chr02 208 94 2278 2392 C 115 80.00 506 reject_low 184,204 ALIGNMENT 64 YS2-18l08.p1k chr16 441 290 945984 946135 C 152 83.55 478 reject_low 221 ALIGNMENT 0 YS2-18l08.q1k chr14 506 209 1863 1862 C 298 0.00 506 reject_low 176,195 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1674 1673 F 19 0.00 478 reject_low 45 ALIGNMENT 0 YS2-18l08.q1k chr16 209 506 946206 946205 F 298 0.00 506 reject_low 183 ALIGNMENT 0 YS2-18l08.q1k chr10 93 62 2216 2215 C 32 0.00 506 reject_low 155 ALIGNMENT 0 YS2-18l08.p1k chr08 460 478 1855 1854 F 19 0.00 478 reject_low 146 ALIGNMENT 116 YS2-18l08.p1k chr10 291 459 1705 1873 F 169 92.31 478 reject_low 37 ALIGNMENT 0 YS2-18l08.q1k chr12 122 123 7268 2020 C 0 0.00 506 reject_low 291 ALIGNMENT 0 YS2-18l08.q1k chr07 65 506 1089394 1089393 F 442 0.00 506 reject_low 269 ALIGNMENT 68 YS2-18l08.p1k chr02 291 459 1990 2158 F 169 82.84 478 reject_low 120 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 7566 7565 F 19 0.00 478 reject_low 80 ALIGNMENT 38 YS2-18l08.q1k chr12 94 208 1076287 1076401 F 115 80.87 506 reject_low 306 ALIGNMENT 50 YS2-18l08.p1k chr12 459 302 1069642 1069799 C 158 79.75 478 reject_low 202 ALIGNMENT 0 YS2-18l08.q1k chr12 209 506 1076653 1076652 F 298 0.00 506 reject_low 286 ALIGNMENT 0 YS2-18l08.q1k chr08 506 209 1760 1759 C 298 0.00 506 reject_low 170,200 ALIGNMENT 81 YS2-18l08.q1k chr13 205 40 1814 1979 C 166 85.54 506 reject_low 98 ALIGNMENT 0 YS2-18l08.p1k chr16 326 62 946495 946494 C 265 0.00 478 reject_low 6 ALIGNMENT 61 YS2-18l08.p1k chr12 441 290 1069624 1069775 C 152 82.89 478 reject_low 223 ALIGNMENT 0 YS2-18l08.p1k chr10 406 478 2215 2214 F 73 0.00 478 reject_low 239 ALIGNMENT 41 YS2-18l08.p1k chr12 291 405 7614 7728 F 115 81.74 478 reject_low 240 ALIGNMENT 0 YS2-18l08.p1k chr15 293 62 1089507 1089506 C 232 0.00 478 reject_low 135 ALIGNMENT 0 YS2-18l08.q1k chr12 122 123 7268 1984 C 0 0.00 506 reject_low 290 ALIGNMENT 113 YS2-18l08.p1k chr08 459 291 560637 560805 C 169 91.72 478 reject_low 44 ALIGNMENT 303 YS2-18l08.p1k chr06 34 459 636 1061 F 426 91.08 478 reject_low 32 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 1815 1814 F 19 0.00 478 reject_low 281 ALIGNMENT 0 YS2-18l08.q1k chr16 98 62 1881 1880 C 37 0.00 506 reject_low 187,199 ALIGNMENT 0 YS2-18l08.q1k chr12 206 506 1076578 1076577 F 301 0.00 506 reject_low 292 ALIGNMENT 77 YS2-18l08.p1k chr04 453 294 1530182 1530341 C 160 85.62 478 reject_low 133 ALIGNMENT 0 YS2-18l08.q1k chr12 56 55 1070018 1076392 F 0 0.00 506 reject_low 293 ALIGNMENT 95 YS2-18l08.q1k chr02 197 40 1677 1834 C 158 89.24 506 reject_low 60,70,76 ALIGNMENT 0 YS2-18l08.p1k chr07 478 460 1089299 1089298 C 19 0.00 478 reject_low 24 ALIGNMENT 42 YS2-18l08.q1k chr07 107 197 1089077 1089167 F 91 84.62 506 reject_low 149,197 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 1887 1886 F 19 0.00 478 reject_low 284 ALIGNMENT 0 YS2-18l08.q1k chr05 506 137 1471 1470 C 370 0.00 506 reject_low 226 ALIGNMENT 119 YS2-18l08.q1k chr09 208 40 1758 1926 C 169 92.90 506 reject_low 2,36 ALIGNMENT 0 YS2-18l08.q1k chr12 53 52 1070015 1076425 F 0 0.00 506 reject_low 292 ALIGNMENT 0 YS2-18l08.p1k chr08 62 290 1759 1758 F 229 0.00 478 reject_low 214 ALIGNMENT 0 YS2-18l08.p1k chr12 62 301 7553 7552 F 240 0.00 478 reject_low 193 ALIGNMENT 0 YS2-18l08.p1k chr08 478 442 560440 560439 C 37 0.00 478 reject_low 217 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 1510 1509 F 19 0.00 478 reject_low 216 ALIGNMENT 84 YS2-18l08.q1k chr16 205 40 1594 1759 C 166 86.14 506 reject_low 85 ALIGNMENT 0 YS2-18l08.q1k chr13 506 209 1704 1703 C 298 0.00 506 reject_low 11 ALIGNMENT 0 YS2-18l08.q1k chr05 209 506 575245 575244 F 298 0.00 506 reject_low 48 ALIGNMENT 84 YS2-18l08.p1k chr08 327 459 1651 1783 F 133 90.23 478 reject_low 115 ALIGNMENT 0 YS2-18l08.p1k chr05 442 478 1944 1943 F 37 0.00 478 reject_low 178 ALIGNMENT 0 YS2-18l08.q1k chr13 506 209 1956 1955 C 298 0.00 506 reject_low 175,194 ALIGNMENT 50 YS2-18l08.p1k chr02 291 459 1918 2086 F 169 79.29 478 reject_low 204 ALIGNMENT 0 YS2-18l08.p1k chr09 438 478 2084 2083 F 41 0.00 478 reject_low 130 ALIGNMENT 22 YS2-18l08.q1k chr07 179 208 1089077 1089106 F 30 93.33 506 reject_low 264 ALIGNMENT 95 YS2-18l08.q1k chr16 40 208 946218 946386 F 169 88.17 506 reject_low 86 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 2050 2049 F 19 0.00 478 reject_low 138 ALIGNMENT 113 YS2-18l08.q1k chr15 40 208 1089449 1089617 F 169 91.72 506 reject_low 18 ALIGNMENT 81 YS2-18l08.p1k chr12 294 459 1938 2103 F 166 85.54 478|0,12 reject_low 75 ALIGNMENT 0 YS2-18l08.q1k chr09 506 214 1898 1897 C 293 0.00 506 reject_low 106 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 2139 2138 F 19 0.00 478 reject_low 294 ALIGNMENT 0 YS2-18l08.q1k chr10 506 209 2066 2065 C 298 0.00 506 reject_low 108,111,117 ALIGNMENT 0 YS2-18l08.p1k chr16 434 62 946495 946494 C 373 0.00 478 reject_low 215 ALIGNMENT 0 YS2-18l08.q1k chr05 209 506 575281 575280 F 298 0.00 506 reject_low 14 ALIGNMENT 92 YS2-18l08.q1k chr02 208 40 1558 1726 C 169 87.57 506 reject_low 129 ALIGNMENT 0 YS2-18l08.p1k chr04 293 62 1530378 1530377 C 232 0.00 478 reject_low 103 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946291 946290 C 19 0.00 478 reject_low 86 ALIGNMENT 77 YS2-18l08.p1k chr02 291 459 2026 2194 F 169 84.62 478 reject_low 107 ALIGNMENT 59 YS2-18l08.q1k chr16 208 40 1663 1831 C 169 81.07 506 reject_low 131 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 1798 1797 F 19 0.00 478 reject_low 60 ALIGNMENT 0 YS2-18l08.p1k chr16 293 62 946240 946239 C 232 0.00 478 reject_low 125 ALIGNMENT 0 YS2-18l08.p1k chr13 460 478 2015 2014 F 19 0.00 478 reject_low 158 ALIGNMENT 21 YS2-18l08.q1k chr12 40 64 1070002 1070026 F 25 96.00 506|0,12 reject_low 35,286,288,292,293,296,297,303,304,306 ALIGNMENT 363 YS2-18l08.q1k chr08 40 465 560673 561098 F 426 95.77 506 reject_low 20 ALIGNMENT 0 YS2-18l08.q1k chr07 137 506 1089394 1089393 F 370 0.00 506 reject_low 211 ALIGNMENT 77 YS2-18l08.q1k chr02 208 40 2026 2194 C 169 84.62 506 reject_low 120 ALIGNMENT 0 YS2-18l08.p1k chr05 290 62 575246 575245 C 229 0.00 478 reject_low 78 ALIGNMENT 0 YS2-18l08.q1k chr02 506 209 2243 2242 C 298 0.00 506 reject_low 136 ALIGNMENT 0 YS2-18l08.p1k chr08 460 478 1891 1890 F 19 0.00 478 reject_low 170 ALIGNMENT 0 YS2-18l08.q1k chr12 506 209 7615 7614 C 298 0.00 506 reject_low 174,177,193 ALIGNMENT 0 YS2-18l08.p1k chr09 460 478 1746 1745 F 19 0.00 478 reject_low 153 ALIGNMENT 0 YS2-18l08.q1k chr16 209 506 946098 946097 F 298 0.00 506 reject_low 196 ALIGNMENT 0 YS2-18l08.p1k chr14 460 478 1778 1777 F 19 0.00 478 reject_low 54 ALIGNMENT 61 YS2-18l08.q1k chr12 58 209 1069624 1069775 F 152 82.89 506 reject_low 134,295 ALIGNMENT 111 YS2-18l08.p1k chr10 327 459 1669 1801 F 133 96.99 478 reject_low 41 ALIGNMENT 0 YS2-18l08.p1k chr02 62 290 1738 1737 F 229 0.00 478 reject_low 145 ALIGNMENT 0 YS2-18l08.p1k chr14 460 478 1814 1813 F 19 0.00 478 reject_low 83 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 1978 1977 F 19 0.00 478 reject_low 186 ALIGNMENT 65 YS2-18l08.q1k chr05 197 58 1805 1944 C 140 85.00 506 reject_low 143 ALIGNMENT 0 YS2-18l08.p1k chr16 62 434 1483 1482 F 373 0.00 478 reject_low 278 ALIGNMENT 101 YS2-18l08.p1k chr12 291 459 7398 7566 F 169 89.35 478 reject_low 80 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1818 1817 F 19 0.00 478 reject_low 114 ALIGNMENT 101 YS2-18l08.p1k chr04 459 291 1530248 1530416 C 169 89.35 478 reject_low 77 ALIGNMENT 0 YS2-18l08.q1k chr12 53 52 1070015 1076461 F 0 0.00 506 reject_low 288 ALIGNMENT 0 YS2-18l08.p1k chr04 478 442 1530087 1530086 C 37 0.00 478 reject_low 222 ALIGNMENT 101 YS2-18l08.q1k chr12 208 40 1755 1923 C 169 89.35 506|84,0 reject_low 281 ALIGNMENT 0 YS2-18l08.q1k chr12 506 206 7438 7437 C 301 0.00 506 reject_low 65,75,80 ALIGNMENT 0 YS2-18l08.p1k chr05 478 460 575042 575041 C 19 0.00 478 reject_low 95 ALIGNMENT 0 YS2-18l08.q1k chr08 62 93 560439 560438 F 32 0.00 506 reject_low 225 ALIGNMENT 387 YS2-18l08.p1k chr10 37 459 1415 1837 F 423 97.87 478 reject_low 3 ALIGNMENT 101 YS2-18l08.p1k chr05 459 291 575077 575245 C 169 89.35 478 reject_low 78 ALIGNMENT 0 YS2-18l08.p1k chr05 62 290 1686 1685 F 229 0.00 478 reject_low 91 ALIGNMENT 0 YS2-18l08.p1k chr13 460 478 1979 1978 F 19 0.00 478 reject_low 123 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1530 1529 F 19 0.00 478 reject_low 188 ALIGNMENT 0 YS2-18l08.q1k chr14 506 206 1722 1721 C 301 0.00 506 reject_low 99 ALIGNMENT 0 YS2-18l08.q1k chr13 506 466 1411 1410 C 41 0.00 506 reject_low 27 ALIGNMENT 0 YS2-18l08.p1k chr16 290 62 946459 946458 C 229 0.00 478 reject_low 86 ALIGNMENT 0 YS2-18l08.p1k chr04 478 460 1530213 1530212 C 19 0.00 478 reject_low 103 ALIGNMENT 0 YS2-18l08.p1k chr12 62 434 1683 1682 F 373 0.00 478 reject_low 305 ALIGNMENT 0 YS2-18l08.p1k chr08 301 62 560615 560614 C 240 0.00 478 reject_low 137 ALIGNMENT 0 YS2-18l08.p1k chr07 434 62 1089395 1089394 C 373 0.00 478 reject_low 206,211,218 ALIGNMENT 0 YS2-18l08.p1k chr05 62 290 1650 1649 F 229 0.00 478 reject_low 114 ALIGNMENT 51 YS2-18l08.p1k chr02 363 459 1486 1582 F 97 86.60 478 reject_low 118,129,147,150,152 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 7674 7673 F 19 0.00 478 reject_low 157 ALIGNMENT 0 YS2-18l08.p1k chr05 62 290 1578 1577 F 229 0.00 478 reject_low 42 ALIGNMENT 0 YS2-18l08.q1k chr06 506 209 1002 1001 C 298 0.00 506 reject_low 179,198 ALIGNMENT 366 YS2-18l08.p1k chr05 34 459 1213 1638 F 426 96.01 478 reject_low 8 ALIGNMENT 64 YS2-18l08.p1k chr14 290 441 1825 1976 F 152 83.55 478 reject_low 176 ALIGNMENT 0 YS2-18l08.p1k chr16 460 478 1723 1722 F 19 0.00 478 reject_low 85 ALIGNMENT 0 YS2-18l08.p1k chr14 62 290 1754 1753 F 229 0.00 478 reject_low 159 ALIGNMENT 0 YS2-18l08.p1k chr15 478 460 1089306 1089305 C 19 0.00 478 reject_low 173 ALIGNMENT 0 YS2-18l08.p1k chr15 478 442 1089252 1089251 C 37 0.00 478 reject_low 224 ALIGNMENT 0 YS2-18l08.q1k chr14 506 209 1611 1610 C 298 0.00 506 reject_low 17 ALIGNMENT 0 YS2-18l08.p1k chr12 62 362 7326 7325 F 301 0.00 478 reject_low 181 ALIGNMENT 0 YS2-18l08.p1k chr07 290 62 1089323 1089322 C 229 0.00 478 reject_low 79 ALIGNMENT 0 YS2-18l08.p1k chr06 460 478 1097 1096 F 19 0.00 478 reject_low 198 ALIGNMENT 0 YS2-18l08.q1k chr12 506 210 2043 2042 C 297 0.00 506 reject_low 294 ALIGNMENT 42 YS2-18l08.p1k chr16 459 399 946434 946494 C 61 91.80 478 reject_low 183,185 ALIGNMENT 0 YS2-18l08.p1k chr12 447 448 1070014 1076460 C 0 0.00 478 reject_low 280 ALIGNMENT 0 YS2-18l08.q1k chr04 466 506 1530745 1530744 F 41 0.00 506 reject_low 22 ALIGNMENT 101 YS2-18l08.q1k chr14 208 40 1646 1814 C 169 89.35 506 reject_low 54 ALIGNMENT 0 YS2-18l08.p1k chr07 290 62 1089215 1089214 C 229 0.00 478 reject_low 197 ALIGNMENT 0 YS2-18l08.p1k chr10 62 290 1705 1704 F 229 0.00 478 reject_low 37 ALIGNMENT 0 YS2-18l08.p1k chr07 478 460 1089371 1089370 C 19 0.00 478 reject_low 206,211,218 ALIGNMENT 68 YS2-18l08.q1k chr02 197 40 2073 2230 C 158 83.54 506 reject_low 141 ALIGNMENT 0 YS2-18l08.q1k chr08 209 506 560589 560588 F 298 0.00 506 reject_low 137 ALIGNMENT 360 YS2-18l08.q1k chr05 40 465 575149 575574 F 426 95.54 506 reject_low 23 ALIGNMENT 357 YS2-18l08.p1k chr04 459 34 1530320 1530745 C 426 95.31 478 reject_low 13 ALIGNMENT 71 YS2-18l08.q1k chr05 208 40 1722 1890 C 169 83.43 506 reject_low 91,114 ALIGNMENT 95 YS2-18l08.p1k chr16 459 291 946218 946386 C 169 88.17 478 reject_low 64 ALIGNMENT 0 YS2-18l08.q1k chr15 466 506 1089910 1089909 F 41 0.00 506 reject_low 25 ALIGNMENT 101 YS2-18l08.p1k chr16 291 459 1555 1723 F 169 89.35 478 reject_low 85 ALIGNMENT 0 YS2-18l08.p1k chr13 62 293 1778 1777 F 232 0.00 478 reject_low 98 ALIGNMENT 0 YS2-18l08.p1k chr08 478 460 560674 560673 C 19 0.00 478 reject_low 9 ALIGNMENT 81 YS2-18l08.p1k chr16 294 459 1630 1795 F 166 85.54 478 reject_low 131 ALIGNMENT 0 YS2-18l08.p1k chr16 460 478 1507 1506 F 19 0.00 478 reject_low 278 ALIGNMENT 0 YS2-18l08.p1k chr16 290 62 946387 946386 C 229 0.00 478 reject_low 64 ALIGNMENT 84 YS2-18l08.q1k chr07 40 205 1089118 1089283 F 166 86.14 506 reject_low 79 ALIGNMENT 0 YS2-18l08.q1k chr08 206 506 560730 560729 F 301 0.00 506 reject_low 44 ALIGNMENT 98 YS2-18l08.q1k chr16 40 208 946182 946350 F 169 88.76 506 reject_low 64 ALIGNMENT 0 YS2-18l08.p1k chr05 62 290 1722 1721 F 229 0.00 478 reject_low 143 ALIGNMENT 372 YS2-18l08.q1k chr12 465 40 1426 1851 C 426 96.48 506|213,0 reject_low 34 ALIGNMENT 113 YS2-18l08.q1k chr04 40 208 1530284 1530452 F 169 91.72 506 reject_low 13 ALIGNMENT 0 YS2-18l08.p1k chr14 62 289 1825 1824 F 228 0.00 478 reject_low 176 ALIGNMENT 0 YS2-18l08.q1k chr05 206 506 575170 575169 F 301 0.00 506 reject_low 95 ALIGNMENT 0 YS2-18l08.q1k chr15 62 93 1089251 1089250 F 32 0.00 506 reject_low 203 ALIGNMENT 113 YS2-18l08.q1k chr13 208 40 1703 1871 C 169 91.72 506 reject_low 11 ALIGNMENT 50 YS2-18l08.q1k chr04 40 197 1530104 1530261 F 158 79.75 506 reject_low 171 ALIGNMENT 0 YS2-18l08.q1k chr16 506 206 1631 1630 C 301 0.00 506 reject_low 100 ALIGNMENT 0 YS2-18l08.p1k chr16 62 362 1483 1482 F 301 0.00 478 reject_low 182 ALIGNMENT 0 YS2-18l08.p1k chr07 289 62 1089144 1089143 C 228 0.00 478 reject_low 232 ALIGNMENT 113 YS2-18l08.p1k chr12 291 459 7362 7530 F 169 91.72 478 reject_low 51 ALIGNMENT 0 YS2-18l08.p1k chr12 62 289 7577 7576 F 228 0.00 478 reject_low 174 ALIGNMENT 59 YS2-18l08.p1k chr12 291 459 1971 2139 F 169 81.07 478 reject_low 294 ALIGNMENT 92 YS2-18l08.p1k chr12 291 459 1791 1959 F 169 87.57 478 reject_low 283 ALIGNMENT 0 YS2-18l08.p1k chr12 293 62 1069916 1069915 C 232 0.00 478 reject_low 104 ALIGNMENT 105 YS2-18l08.q1k chr08 40 205 560565 560730 F 166 90.36 506 reject_low 44 ALIGNMENT 89 YS2-18l08.q1k chr12 208 40 1719 1887 C 169 86.98 506|84,0 reject_low 289 ALIGNMENT 0 YS2-18l08.p1k chr08 290 62 560590 560589 C 229 0.00 478 reject_low 217 ALIGNMENT 0 YS2-18l08.p1k chr05 289 62 575067 575066 C 228 0.00 478 reject_low 220 ALIGNMENT 0 YS2-18l08.p1k chr08 62 434 1651 1650 F 373 0.00 478 reject_low 261 ALIGNMENT 41 YS2-18l08.p1k chr16 405 291 945984 946098 C 115 81.74 478 reject_low 243 ALIGNMENT 0 YS2-18l08.p1k chr12 290 62 1076510 1076509 C 229 0.00 478 reject_low 296 ALIGNMENT 0 YS2-18l08.q1k chr13 506 209 1848 1847 C 298 0.00 506 reject_low 162 ALIGNMENT 0 YS2-18l08.p1k chr14 62 290 1862 1861 F 229 0.00 478 reject_low 242 ALIGNMENT 0 YS2-18l08.p1k chr10 62 290 2101 2100 F 229 0.00 478 reject_low 239 ALIGNMENT 0 YS2-18l08.p1k chr05 478 442 574916 574915 C 37 0.00 478 reject_low 220 ALIGNMENT 46 YS2-18l08.q1k chr09 197 134 2021 2084 C 64 93.75 506 reject_low 169 ALIGNMENT 0 YS2-18l08.q1k chr08 466 506 561098 561097 F 41 0.00 506 reject_low 20 ALIGNMENT 0 YS2-18l08.p1k chr12 62 290 1971 1970 F 229 0.00 478 reject_low 294 ALIGNMENT 0 YS2-18l08.p1k chr04 478 460 1530393 1530392 C 19 0.00 478 reject_low 22,166 ALIGNMENT 0 YS2-18l08.q1k chr07 209 506 1089322 1089321 F 298 0.00 506 reject_low 49 ALIGNMENT 101 YS2-18l08.p1k chr12 291 459 1755 1923 F 169 89.35 478|0,12 reject_low 39 ALIGNMENT 52 YS2-18l08.p1k chr02 290 441 1845 1996 F 152 80.92 478 reject_low 180 ALIGNMENT 0 YS2-18l08.p1k chr05 62 434 1470 1469 F 373 0.00 478 reject_low 260 ALIGNMENT 0 YS2-18l08.p1k chr09 62 290 1758 1757 F 229 0.00 478 reject_low 50 ALIGNMENT 0 YS2-18l08.p1k chr16 460 478 1651 1650 F 19 0.00 478 reject_low 19 ALIGNMENT 0 YS2-18l08.p1k chr12 62 293 1938 1937 F 232 0.00 478 reject_low 75 ALIGNMENT 0 YS2-18l08.q1k chr05 506 466 1214 1213 C 41 0.00 506 reject_low 21 ALIGNMENT 41 YS2-18l08.p1k chr13 291 405 1955 2069 F 115 81.74 478 reject_low 241 ALIGNMENT 0 YS2-18l08.p1k chr05 293 62 575171 575170 C 232 0.00 478 reject_low 121 ALIGNMENT 0 YS2-18l08.p1k chr14 62 293 1685 1684 F 232 0.00 478 reject_low 99 ALIGNMENT 0 YS2-18l08.p1k chr04 478 460 1530465 1530464 C 19 0.00 478 reject_low 209 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 2158 2157 F 19 0.00 478 reject_low 120 ALIGNMENT 0 YS2-18l08.p1k chr02 62 301 2145 2144 F 240 0.00 478 reject_low 101 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946435 946434 C 19 0.00 478 reject_low 183,185 ALIGNMENT 38 YS2-18l08.q1k chr15 94 208 1089251 1089365 F 115 80.87 506 reject_low 203 ALIGNMENT 113 YS2-18l08.p1k chr13 291 459 1703 1871 F 169 91.72 478 reject_low 53 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 1582 1581 F 19 0.00 478 reject_low 118,129,147,150,152 ALIGNMENT 0 YS2-18l08.p1k chr08 478 460 560602 560601 C 19 0.00 478 reject_low 63 ALIGNMENT 0 YS2-18l08.q1k chr08 206 506 560694 560693 F 301 0.00 506 reject_low 61,63 ALIGNMENT 0 YS2-18l08.p1k chr09 460 478 1854 1853 F 19 0.00 478 reject_low 2 ALIGNMENT 53 YS2-18l08.p1k chr14 302 459 1801 1958 F 158 80.38 478 reject_low 195 ALIGNMENT 0 YS2-18l08.p1k chr14 460 478 1670 1669 F 19 0.00 478 reject_low 163 ALIGNMENT 0 YS2-18l08.p1k chr12 447 448 1070014 1076496 C 0 0.00 478 reject_low 279 ALIGNMENT 0 YS2-18l08.q1k chr16 466 506 946751 946750 F 41 0.00 506 reject_low 6 ALIGNMENT 0 YS2-18l08.p1k chr12 289 62 1076439 1076438 C 228 0.00 478 reject_low 295 ALIGNMENT 0 YS2-18l08.p1k chr07 478 460 1089227 1089226 C 19 0.00 478 reject_low 15 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 2230 2229 F 19 0.00 478 reject_low 140 ALIGNMENT 41 YS2-18l08.p1k chr07 356 290 1089077 1089143 C 67 89.55 478 reject_low 232 ALIGNMENT 42 YS2-18l08.q1k chr08 100 40 1651 1711 C 61 91.80 506 reject_low 235 ALIGNMENT 0 YS2-18l08.p1k chr12 438 439 1070023 1076289 C 0 0.00 478 reject_low 295 ALIGNMENT 0 YS2-18l08.q1k chr15 209 506 1089473 1089472 F 298 0.00 506 reject_low 168 ALIGNMENT 0 YS2-18l08.q1k chr10 506 209 1706 1705 C 298 0.00 506 reject_low 41 ALIGNMENT 0 YS2-18l08.q1k chr02 506 209 2027 2026 C 298 0.00 506 reject_low 120 ALIGNMENT 0 YS2-18l08.p1k chr12 62 289 2042 2041 F 228 0.00 478 reject_low 112 ALIGNMENT 21 YS2-18l08.q1k chr16 64 40 1483 1507 C 25 96.00 506 reject_low 275 ALIGNMENT 0 YS2-18l08.q1k chr16 506 206 1595 1594 C 301 0.00 506 reject_low 85 ALIGNMENT 84 YS2-18l08.p1k chr05 327 459 1470 1602 F 133 90.23 478 reject_low 67,68 ALIGNMENT 62 YS2-18l08.q1k chr09 208 98 1974 2084 C 111 88.29 506 reject_low 126,130 ALIGNMENT 0 YS2-18l08.p1k chr14 62 290 1646 1645 F 229 0.00 478 reject_low 83 ALIGNMENT 84 YS2-18l08.q1k chr05 172 40 1470 1602 C 133 90.23 506 reject_low 205 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 7602 7601 F 19 0.00 478 reject_low 97 ALIGNMENT 101 YS2-18l08.q1k chr16 40 197 946146 946303 F 158 90.51 506 reject_low 58 ALIGNMENT 51 YS2-18l08.q1k chr02 136 40 1486 1582 C 97 86.60 506 reject_low 227 ALIGNMENT 113 YS2-18l08.q1k chr12 40 208 1076485 1076653 F 169 91.72 506|13,0 reject_low 286 ALIGNMENT 0 YS2-18l08.q1k chr02 506 198 1678 1677 C 309 0.00 506 reject_low 60,70,76 ALIGNMENT 0 YS2-18l08.q1k chr05 209 506 575137 575136 F 298 0.00 506 reject_low 161 ALIGNMENT 64 YS2-18l08.q1k chr05 58 209 574915 575066 F 152 83.55 506 reject_low 121 ALIGNMENT 0 YS2-18l08.p1k chr12 290 62 1069847 1069846 C 229 0.00 478 reject_low 172 ALIGNMENT 89 YS2-18l08.p1k chr16 459 291 946290 946458 C 169 86.98 478 reject_low 86 ALIGNMENT 51 YS2-18l08.q1k chr12 40 136 1069930 1070026 F 97 86.60 506 reject_low 299 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 1837 1836 F 19 0.00 478 reject_low 3 ALIGNMENT 104 YS2-18l08.q1k chr02 208 40 1630 1798 C 169 89.94 506 reject_low 12 ALIGNMENT 0 YS2-18l08.q1k chr12 466 506 1070283 1070282 F 41 0.00 506 reject_low 1 ALIGNMENT 0 YS2-18l08.q1k chr07 209 506 1089214 1089213 F 298 0.00 506 reject_low 206 ALIGNMENT 113 YS2-18l08.q1k chr12 40 208 1069822 1069990 F 169 91.72 506 reject_low 16,279 ALIGNMENT 80 YS2-18l08.p1k chr02 291 459 2098 2266 F 169 85.21 478 reject_low 110 ALIGNMENT 51 YS2-18l08.q1k chr12 40 136 1076593 1076689 F 97 86.60 506|13,0 reject_low 303 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1602 1601 F 19 0.00 478 reject_low 67,68 ALIGNMENT 95 YS2-18l08.q1k chr10 208 40 1813 1981 C 169 88.17 506 reject_low 73 ALIGNMENT 0 YS2-18l08.q1k chr05 210 506 575066 575065 F 297 0.00 506 reject_low 121 ALIGNMENT 84 YS2-18l08.q1k chr12 40 205 1069750 1069915 F 166 86.14 506 reject_low 81,285 ALIGNMENT 81 YS2-18l08.q1k chr12 205 40 1938 2103 C 166 85.54 506|83,0 reject_low 291 ALIGNMENT 0 YS2-18l08.p1k chr09 460 478 1998 1997 F 19 0.00 478 reject_low 88 ALIGNMENT 59 YS2-18l08.q1k chr16 209 63 1734 1880 C 147 82.99 506 reject_low 151 ALIGNMENT 21 YS2-18l08.p1k chr15 459 435 1089629 1089653 C 25 96.00 478 reject_low 213 ALIGNMENT 0 YS2-18l08.p1k chr14 460 478 1922 1921 F 19 0.00 478 reject_low 159 ALIGNMENT 0 YS2-18l08.q1k chr05 506 198 1806 1805 C 309 0.00 506 reject_low 143 ALIGNMENT 74 YS2-18l08.p1k chr09 291 459 1866 2034 F 169 84.02 478 reject_low 106 ALIGNMENT 0 YS2-18l08.p1k chr05 62 362 1470 1469 F 301 0.00 478 reject_low 139 ALIGNMENT 0 YS2-18l08.q1k chr16 101 506 946494 946493 F 406 0.00 506 reject_low 215 ALIGNMENT 98 YS2-18l08.q1k chr05 208 40 1686 1854 C 169 88.76 506 reject_low 57 ALIGNMENT 74 YS2-18l08.p1k chr10 291 441 2065 2215 F 151 86.09 478 reject_low 155 ALIGNMENT 101 YS2-18l08.p1k chr13 291 459 1739 1907 F 169 89.35 478 reject_low 82 ALIGNMENT 0 YS2-18l08.q1k chr12 198 506 1069799 1069798 F 309 0.00 506 reject_low 172 ALIGNMENT 0 YS2-18l08.q1k chr13 506 206 1815 1814 C 301 0.00 506 reject_low 98 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 2125 2124 F 19 0.00 478 reject_low 59 ALIGNMENT 0 YS2-18l08.q1k chr09 506 209 1759 1758 C 298 0.00 506 reject_low 2,36 ALIGNMENT 0 YS2-18l08.q1k chr02 506 198 1822 1821 C 309 0.00 506 reject_low 216 ALIGNMENT 24 YS2-18l08.q1k chr12 64 40 1683 1707 C 25 100.00 506 reject_low 258 ALIGNMENT 0 YS2-18l08.q1k chr12 62 61 1070024 1076290 F 0 0.00 506 reject_low 296 ALIGNMENT 113 YS2-18l08.q1k chr12 208 40 7362 7530 C 169 91.72 506 reject_low 10 ALIGNMENT 84 YS2-18l08.q1k chr08 172 40 1651 1783 C 133 90.23 506 reject_low 30 ALIGNMENT 0 YS2-18l08.p1k chr14 460 478 1958 1957 F 19 0.00 478 reject_low 195 ALIGNMENT 0 YS2-18l08.q1k chr12 137 506 1076689 1076688 F 370 0.00 506 reject_low 303 ALIGNMENT 95 YS2-18l08.p1k chr02 302 459 1677 1834 F 158 89.24 478 reject_low 87 ALIGNMENT 74 YS2-18l08.q1k chr10 208 40 1849 2017 C 169 84.02 506 reject_low 154 ALIGNMENT 0 YS2-18l08.p1k chr12 62 290 1791 1790 F 229 0.00 478 reject_low 283 ALIGNMENT 360 YS2-18l08.q1k chr04 40 465 1530320 1530745 F 426 95.54 506 reject_low 22 ALIGNMENT 0 YS2-18l08.q1k chr12 88 89 7302 1730 C 0 0.00 506 reject_low 307 ALIGNMENT 0 YS2-18l08.q1k chr12 209 506 1069846 1069845 F 298 0.00 506 reject_low 167 ALIGNMENT 21 YS2-18l08.p1k chr05 459 435 575293 575317 C 25 96.00 478 reject_low 210 ALIGNMENT 24 YS2-18l08.p1k chr08 435 459 1651 1675 F 25 100.00 478 reject_low 261 ALIGNMENT 372 YS2-18l08.q1k chr16 40 465 946326 946751 F 426 96.48 506 reject_low 6 ALIGNMENT 84 YS2-18l08.p1k chr04 459 294 1530212 1530377 C 166 86.14 478 reject_low 103 ALIGNMENT 57 YS2-18l08.p1k chr12 363 459 1683 1779 F 97 88.66 478 reject_low 289,290,291 ALIGNMENT 0 YS2-18l08.p1k chr12 442 478 7728 7727 F 37 0.00 478 reject_low 174 ALIGNMENT 0 YS2-18l08.p1k chr07 293 62 1089248 1089247 C 232 0.00 478 reject_low 149 ALIGNMENT 0 YS2-18l08.q1k chr16 209 506 946422 946421 F 298 0.00 506 reject_low 7 ALIGNMENT 67 YS2-18l08.p1k chr02 290 459 1881 2050 F 170 82.35 478 reject_low 138 ALIGNMENT 101 YS2-18l08.p1k chr07 459 291 1089154 1089322 C 169 89.35 478 reject_low 79 ALIGNMENT 0 YS2-18l08.q1k chr08 137 506 560841 560840 F 370 0.00 506 reject_low 212 ALIGNMENT 0 YS2-18l08.p1k chr13 62 362 1667 1666 F 301 0.00 478 reject_low 162 ALIGNMENT 81 YS2-18l08.p1k chr13 294 459 1814 1979 F 166 85.54 478 reject_low 123 ALIGNMENT 0 YS2-18l08.p1k chr02 62 285 1769 1768 F 224 0.00 478 reject_low 132,141 ALIGNMENT 0 YS2-18l08.p1k chr16 290 62 946207 946206 C 229 0.00 478 reject_low 160 ALIGNMENT 0 YS2-18l08.p1k chr07 478 393 1089078 1089077 C 86 0.00 478 reject_low 244 ALIGNMENT 0 YS2-18l08.q1k chr12 65 93 1070027 1076286 F 29 0.00 506 reject_low 306 ALIGNMENT 71 YS2-18l08.q1k chr10 213 40 1880 2053 C 174 82.76 506 reject_low 148 ALIGNMENT 0 YS2-18l08.p1k chr02 442 478 2392 2391 F 37 0.00 478 reject_low 184 ALIGNMENT 0 YS2-18l08.q1k chr16 137 506 946494 946493 F 370 0.00 506 reject_low 185 ALIGNMENT 50 YS2-18l08.p1k chr06 302 459 940 1097 F 158 79.75 478 reject_low 198 ALIGNMENT 0 YS2-18l08.p1k chr13 460 478 1763 1762 F 19 0.00 478 reject_low 162 ALIGNMENT 0 YS2-18l08.p1k chr02 62 290 2170 2169 F 229 0.00 478 reject_low 127 ALIGNMENT 64 YS2-18l08.p1k chr13 290 441 1918 2069 F 152 83.55 478 reject_low 175 ALIGNMENT 0 YS2-18l08.p1k chr15 478 460 1089450 1089449 C 19 0.00 478 reject_low 55 ALIGNMENT 0 YS2-18l08.q1k chr10 506 209 1814 1813 C 298 0.00 506 reject_low 73 ALIGNMENT 0 YS2-18l08.p1k chr06 406 478 1115 1114 F 73 0.00 478 reject_low 238 ALIGNMENT 0 YS2-18l08.p1k chr07 478 357 1089078 1089077 C 122 0.00 478 reject_low 232 ALIGNMENT 0 YS2-18l08.p1k chr12 290 62 1069739 1069738 C 229 0.00 478 reject_low 248 ALIGNMENT 41 YS2-18l08.q1k chr14 208 94 1862 1976 C 115 81.74 506 reject_low 176,195 ALIGNMENT 0 YS2-18l08.q1k chr16 206 506 946239 946238 F 301 0.00 506 reject_low 90 ALIGNMENT 0 YS2-18l08.q1k chr12 506 209 7507 7506 C 298 0.00 506 reject_low 142 ALIGNMENT 0 YS2-18l08.q1k chr12 466 506 1076946 1076945 F 41 0.00 506 reject_low 35 ALIGNMENT 0 YS2-18l08.q1k chr12 506 65 7327 7326 C 442 0.00 506 reject_low 34,281,282,283,284,289,290,291,298,300,301,307,308 ALIGNMENT 0 YS2-18l08.q1k chr08 93 62 1910 1909 C 32 0.00 506 reject_low 214 ALIGNMENT 0 YS2-18l08.q1k chr15 137 506 1089653 1089652 F 370 0.00 506 reject_low 213 ALIGNMENT 42 YS2-18l08.p1k chr08 399 459 1651 1711 F 61 91.80 478 reject_low 200 ALIGNMENT 0 YS2-18l08.p1k chr07 478 460 1089191 1089190 C 19 0.00 478 reject_low 49 ALIGNMENT 0 YS2-18l08.q1k chr02 93 62 2393 2392 C 32 0.00 506 reject_low 184,204 ALIGNMENT 0 YS2-18l08.q1k chr05 506 209 1543 1542 C 298 0.00 506 reject_low 68 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 1743 1742 F 19 0.00 478 reject_low 190,298,300 ALIGNMENT 360 YS2-18l08.q1k chr14 465 40 1317 1742 C 426 95.54 506 reject_low 28 ALIGNMENT 0 YS2-18l08.p1k chr05 62 290 1614 1613 F 229 0.00 478 reject_low 57 ALIGNMENT 0 YS2-18l08.p1k chr07 478 321 1089078 1089077 C 158 0.00 478 reject_low 265 ALIGNMENT 24 YS2-18l08.q1k chr16 40 64 946470 946494 F 25 100.00 506 reject_low 259 ALIGNMENT 0 YS2-18l08.q1k chr02 506 206 1598 1597 C 301 0.00 506 reject_low 66 ALIGNMENT 87 YS2-18l08.p1k chr12 294 459 1902 2067 F 166 86.75 478|0,12 reject_low 65 ALIGNMENT 21 YS2-18l08.p1k chr08 459 435 560817 560841 C 25 96.00 478 reject_low 212,225 ALIGNMENT 357 YS2-18l08.p1k chr14 34 459 1317 1742 F 426 95.31 478 reject_low 17 ALIGNMENT 57 YS2-18l08.p1k chr16 459 363 946398 946494 C 97 88.66 478 reject_low 116,119 ALIGNMENT 0 YS2-18l08.p1k chr12 301 62 1069800 1069799 C 240 0.00 478 reject_low 202 ALIGNMENT 0 YS2-18l08.q1k chr05 506 173 1471 1470 C 334 0.00 506 reject_low 205 ALIGNMENT 0 YS2-18l08.q1k chr16 506 65 1484 1483 C 442 0.00 506 reject_low 275 ALIGNMENT 46 YS2-18l08.p1k chr09 302 365 2021 2084 F 64 93.75 478 reject_low 231 ALIGNMENT 0 YS2-18l08.q1k chr02 506 137 1487 1486 C 370 0.00 506 reject_low 227 ALIGNMENT 357 YS2-18l08.p1k chr16 34 459 1226 1651 F 426 95.31 478 reject_low 19 ALIGNMENT 0 YS2-18l08.p1k chr13 62 434 1667 1666 F 373 0.00 478 reject_low 276 ALIGNMENT 0 YS2-18l08.p1k chr02 62 290 2242 2241 F 229 0.00 478 reject_low 184 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1890 1889 F 19 0.00 478 reject_low 143 ALIGNMENT 51 YS2-18l08.q1k chr16 136 40 1483 1579 C 97 86.60 506 reject_low 230 ALIGNMENT 0 YS2-18l08.q1k chr05 506 209 1615 1614 C 298 0.00 506 reject_low 42 ALIGNMENT 61 YS2-18l08.q1k chr12 58 209 1076287 1076438 F 152 82.89 506|4,0 reject_low 296 ALIGNMENT 0 YS2-18l08.q1k chr05 506 209 1651 1650 C 298 0.00 506 reject_low 139 ALIGNMENT 0 YS2-18l08.p1k chr09 62 290 1722 1721 F 229 0.00 478 reject_low 36 ALIGNMENT 98 YS2-18l08.p1k chr16 459 291 946182 946350 C 169 88.76 478 reject_low 74 ALIGNMENT 0 YS2-18l08.p1k chr07 478 460 1089155 1089154 C 19 0.00 478 reject_low 79 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 2302 2301 F 19 0.00 478 reject_low 101 ALIGNMENT 0 YS2-18l08.q1k chr12 62 93 1069624 1069623 F 32 0.00 506 reject_low 202,302 ALIGNMENT 24 YS2-18l08.p1k chr10 435 459 1669 1693 F 25 100.00 478 reject_low 263 ALIGNMENT 0 YS2-18l08.q1k chr09 506 209 1867 1866 C 298 0.00 506 reject_low 153 ALIGNMENT 0 YS2-18l08.q1k chr04 210 506 1530237 1530236 F 297 0.00 506 reject_low 133 ALIGNMENT 113 YS2-18l08.p1k chr04 459 291 1530284 1530452 C 169 91.72 478 reject_low 47 ALIGNMENT 0 YS2-18l08.p1k chr12 447 448 1070014 1076424 C 0 0.00 478 reject_low 285 ALIGNMENT 369 YS2-18l08.p1k chr16 459 34 946326 946751 C 426 96.24 478 reject_low 7 ALIGNMENT 0 YS2-18l08.q1k chr08 209 506 560553 560552 F 298 0.00 506 reject_low 225 ALIGNMENT 0 YS2-18l08.p1k chr12 62 290 7398 7397 F 229 0.00 478 reject_low 80 ALIGNMENT 363 YS2-18l08.q1k chr13 465 40 1410 1835 C 426 95.77 506 reject_low 27 ALIGNMENT 65 YS2-18l08.q1k chr06 197 58 976 1115 C 140 85.00 506 reject_low 32 ALIGNMENT 75 YS2-18l08.p1k chr02 294 459 1705 1870 F 166 84.34 478 reject_low 109 ALIGNMENT 357 YS2-18l08.p1k chr07 459 34 1089226 1089651 C 426 95.31 478 reject_low 15 ALIGNMENT 101 YS2-18l08.q1k chr07 40 208 1089154 1089322 F 169 89.35 506 reject_low 49 ALIGNMENT 0 YS2-18l08.q1k chr02 506 209 1559 1558 C 298 0.00 506 reject_low 129 ALIGNMENT 0 YS2-18l08.p1k chr10 62 398 1669 1668 F 337 0.00 478 reject_low 148,154 ALIGNMENT 66 YS2-18l08.p1k chr08 363 459 1651 1747 F 97 91.75 478 reject_low 144 ALIGNMENT 0 YS2-18l08.p1k chr05 434 62 575318 575317 C 373 0.00 478 reject_low 210 ALIGNMENT 51 YS2-18l08.p1k chr14 363 459 1574 1670 F 97 86.60 478 reject_low 163 ALIGNMENT 0 YS2-18l08.p1k chr08 460 478 1747 1746 F 19 0.00 478 reject_low 144 ALIGNMENT 0 YS2-18l08.p1k chr12 478 460 1069643 1069642 C 19 0.00 478 reject_low 202 ALIGNMENT 57 YS2-18l08.q1k chr12 136 40 1683 1779 C 97 88.66 506|48,0 reject_low 307 ALIGNMENT 101 YS2-18l08.q1k chr10 197 40 1932 2089 C 158 90.51 506 reject_low 62 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 7350 7349 F 19 0.00 478 reject_low 39,43,65,75,112,142,177 ALIGNMENT 0 YS2-18l08.p1k chr16 460 478 1831 1830 F 19 0.00 478 reject_low 151 ALIGNMENT 51 YS2-18l08.p1k chr05 459 363 575221 575317 C 97 86.60 478 reject_low 23,161 ALIGNMENT 0 YS2-18l08.q1k chr14 93 62 1977 1976 C 32 0.00 506 reject_low 176,195 ALIGNMENT 74 YS2-18l08.p1k chr02 291 459 2170 2338 F 169 84.02 478 reject_low 127 ALIGNMENT 0 YS2-18l08.q1k chr06 506 466 637 636 C 41 0.00 506 reject_low 33 ALIGNMENT 53 YS2-18l08.q1k chr16 40 197 946002 946159 F 158 80.38 506 reject_low 160 ALIGNMENT 0 YS2-18l08.q1k chr09 506 198 1950 1949 C 309 0.00 506 reject_low 88 ALIGNMENT 0 YS2-18l08.p1k chr07 362 62 1089395 1089394 C 301 0.00 478 reject_low 24 ALIGNMENT 0 YS2-18l08.p1k chr05 478 460 575114 575113 C 19 0.00 478 reject_low 48 ALIGNMENT 39 YS2-18l08.q1k chr10 100 40 1669 1729 C 61 90.16 506 reject_low 246 ALIGNMENT 107 YS2-18l08.q1k chr10 208 40 1957 2125 C 169 90.53 506 reject_low 38 ALIGNMENT 0 YS2-18l08.q1k chr12 106 107 7284 1748 C 0 0.00 506 reject_low 301 ALIGNMENT 0 YS2-18l08.p1k chr02 62 293 1705 1704 F 232 0.00 478 reject_low 109 ALIGNMENT 41 YS2-18l08.p1k chr14 291 405 1862 1976 F 115 81.74 478 reject_low 242 ALIGNMENT 0 YS2-18l08.q1k chr08 506 209 1724 1723 C 298 0.00 506 reject_low 146 ALIGNMENT 0 YS2-18l08.q1k chr12 210 506 1076438 1076437 F 297 0.00 506 reject_low 296 ALIGNMENT 0 YS2-18l08.p1k chr04 362 62 1530489 1530488 C 301 0.00 478 reject_low 22,166 ALIGNMENT 0 YS2-18l08.q1k chr10 506 198 2005 2004 C 309 0.00 506 reject_low 59,69 ALIGNMENT 0 YS2-18l08.q1k chr07 62 142 1089077 1089076 F 81 0.00 506 reject_low 218 ALIGNMENT 0 YS2-18l08.p1k chr04 478 454 1530183 1530182 C 25 0.00 478 reject_low 133 ALIGNMENT 0 YS2-18l08.p1k chr09 62 398 1686 1685 F 337 0.00 478 reject_low 153 ALIGNMENT 0 YS2-18l08.p1k chr14 460 478 1598 1597 F 19 0.00 478 reject_low 277 ALIGNMENT 0 YS2-18l08.q1k chr15 209 506 1089365 1089364 F 298 0.00 506 reject_low 203 ALIGNMENT 0 YS2-18l08.p1k chr14 460 478 1886 1885 F 19 0.00 478 reject_low 124 ALIGNMENT 0 YS2-18l08.p1k chr02 62 301 1677 1676 F 240 0.00 478 reject_low 87 ALIGNMENT 0 YS2-18l08.q1k chr12 209 506 1069990 1069989 F 298 0.00 506 reject_low 16,279 ALIGNMENT 81 YS2-18l08.p1k chr12 294 459 7473 7638 F 166 85.54 478 reject_low 122 ALIGNMENT 0 YS2-18l08.p1k chr10 62 290 2029 2028 F 229 0.00 478 reject_low 111 ALIGNMENT 0 YS2-18l08.q1k chr12 506 198 7554 7553 C 309 0.00 506 reject_low 157,181 ALIGNMENT 0 YS2-18l08.p1k chr06 62 301 976 975 F 240 0.00 478 reject_low 179 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946471 946470 C 19 0.00 478 reject_low 215 ALIGNMENT 101 YS2-18l08.p1k chr10 302 459 1932 2089 F 158 90.51 478 reject_low 69 ALIGNMENT 47 YS2-18l08.p1k chr02 302 459 1821 1978 F 158 79.11 478 reject_low 186 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 1762 1761 F 19 0.00 478 reject_low 70 ALIGNMENT 0 YS2-18l08.q1k chr12 506 137 7327 7326 C 370 0.00 506 reject_low 190 ALIGNMENT 0 YS2-18l08.p1k chr04 290 62 1530453 1530452 C 229 0.00 478 reject_low 47 ALIGNMENT 0 YS2-18l08.p1k chr04 478 460 1530105 1530104 C 19 0.00 478 reject_low 201 ALIGNMENT 0 YS2-18l08.p1k chr12 434 62 1076690 1076689 C 373 0.00 478 reject_low 303,304,306 ALIGNMENT 0 YS2-18l08.q1k chr10 506 173 1670 1669 C 334 0.00 506 reject_low 165 ALIGNMENT 0 YS2-18l08.p1k chr16 478 442 945985 945984 C 37 0.00 478 reject_low 221 ALIGNMENT 21 YS2-18l08.p1k chr16 435 459 1483 1507 F 25 96.00 478 reject_low 278 ALIGNMENT 0 YS2-18l08.q1k chr15 206 506 1089542 1089541 F 301 0.00 506 reject_low 84 ALIGNMENT 0 YS2-18l08.q1k chr05 209 506 575029 575028 F 298 0.00 506 reject_low 192 ALIGNMENT 53 YS2-18l08.p1k chr12 302 459 7553 7710 F 158 80.38 478 reject_low 193 ALIGNMENT 0 YS2-18l08.p1k chr12 478 460 1076666 1076665 C 19 0.00 478 reject_low 303,304,306 ALIGNMENT 65 YS2-18l08.q1k chr02 208 40 1738 1906 C 169 82.25 506 reject_low 152 ALIGNMENT 51 YS2-18l08.p1k chr13 363 459 1667 1763 F 97 86.60 478 reject_low 162 ALIGNMENT 98 YS2-18l08.q1k chr12 197 40 1874 2031 C 158 89.87 506|79,0 reject_low 282 ALIGNMENT 41 YS2-18l08.p1k chr06 291 405 1001 1115 F 115 81.74 478 reject_low 238 ALIGNMENT 0 YS2-18l08.q1k chr13 506 198 1895 1894 C 309 0.00 506 reject_low 158 ALIGNMENT 0 YS2-18l08.p1k chr09 62 285 1897 1896 F 224 0.00 478 reject_low 126 ALIGNMENT 93 YS2-18l08.q1k chr08 40 205 560529 560694 F 166 87.95 506 reject_low 61,63 ALIGNMENT 0 YS2-18l08.p1k chr08 460 478 1711 1710 F 19 0.00 478 reject_low 200 ALIGNMENT 39 YS2-18l08.p1k chr09 399 459 1686 1746 F 61 90.16 478 reject_low 153 ALIGNMENT 53 YS2-18l08.p1k chr05 459 302 574933 575090 C 158 80.38 478 reject_low 192 ALIGNMENT 0 YS2-18l08.p1k chr02 62 290 1990 1989 F 229 0.00 478 reject_low 120 ALIGNMENT 61 YS2-18l08.q1k chr04 58 209 1530086 1530237 F 152 82.89 506 reject_low 133 ALIGNMENT 0 YS2-18l08.p1k chr12 290 62 1076618 1076617 C 229 0.00 478 reject_low 280 ALIGNMENT 42 YS2-18l08.q1k chr16 40 100 946434 946494 F 61 91.80 506 reject_low 215 ALIGNMENT 0 YS2-18l08.q1k chr02 506 210 1882 1881 C 297 0.00 506 reject_low 132 ALIGNMENT 51 YS2-18l08.p1k chr04 459 363 1530392 1530488 C 97 86.60 478 reject_low 22,166 ALIGNMENT 0 YS2-18l08.p1k chr16 398 62 946495 946494 C 337 0.00 478 reject_low 183,185 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1854 1853 F 19 0.00 478 reject_low 91 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 1779 1778 F 19 0.00 478 reject_low 289,290,291 ALIGNMENT 67 YS2-18l08.q1k chr02 209 40 1881 2050 C 170 82.35 506 reject_low 132 ALIGNMENT 0 YS2-18l08.p1k chr13 62 290 1739 1738 F 229 0.00 478 reject_low 82 ALIGNMENT 0 YS2-18l08.p1k chr08 362 62 560842 560841 C 301 0.00 478 reject_low 20,113 ALIGNMENT 64 YS2-18l08.p1k chr05 441 290 574915 575066 C 152 83.55 478 reject_low 220 ALIGNMENT 0 YS2-18l08.p1k chr04 290 62 1530201 1530200 C 229 0.00 478 reject_low 247 ALIGNMENT 95 YS2-18l08.q1k chr09 208 40 1830 1998 C 169 88.17 506 reject_low 50,72 ALIGNMENT 0 YS2-18l08.q1k chr16 209 506 946458 946457 F 298 0.00 506 reject_low 119 ALIGNMENT 0 YS2-18l08.p1k chr12 478 460 1070003 1070002 C 19 0.00 478 reject_low 1,279,280,285,287,295,299,302 ALIGNMENT 0 YS2-18l08.p1k chr05 460 478 1638 1637 F 19 0.00 478 reject_low 8 ALIGNMENT 0 YS2-18l08.p1k chr05 478 460 574934 574933 C 19 0.00 478 reject_low 192 ALIGNMENT 0 YS2-18l08.q1k chr10 506 209 1742 1741 C 298 0.00 506 reject_low 3,37 ALIGNMENT 0 YS2-18l08.p1k chr06 62 290 1001 1000 F 229 0.00 478 reject_low 238 ALIGNMENT 0 YS2-18l08.q1k chr16 209 506 946278 946277 F 298 0.00 506 reject_low 71,74 ALIGNMENT 0 YS2-18l08.p1k chr12 460 478 1995 1994 F 19 0.00 478 reject_low 282 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 2338 2337 F 19 0.00 478 reject_low 127 ALIGNMENT 0 YS2-18l08.q1k chr07 62 178 1089077 1089076 F 117 0.00 506 reject_low 264 ALIGNMENT 24 YS2-18l08.q1k chr05 64 40 1470 1494 C 25 100.00 506 reject_low 254 ALIGNMENT 0 YS2-18l08.q1k chr12 209 506 1069954 1069953 F 298 0.00 506 reject_low 52,280 ALIGNMENT 101 YS2-18l08.p1k chr14 291 459 1646 1814 F 169 89.35 478 reject_low 83 ALIGNMENT 80 YS2-18l08.p1k chr05 291 459 1650 1818 F 169 85.21 478 reject_low 114 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 2053 2052 F 19 0.00 478 reject_low 108 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 2194 2193 F 19 0.00 478 reject_low 107 ALIGNMENT 50 YS2-18l08.q1k chr06 197 40 940 1097 C 158 79.75 506 reject_low 191 ALIGNMENT 51 YS2-18l08.q1k chr04 40 136 1530392 1530488 F 97 86.60 506 reject_low 209 ALIGNMENT 0 YS2-18l08.q1k chr12 53 52 1070015 1076533 F 0 0.00 506 reject_low 35 ALIGNMENT 0 YS2-18l08.p1k chr05 62 301 1805 1804 F 240 0.00 478 reject_low 178 ALIGNMENT 0 YS2-18l08.p1k chr08 290 62 560770 560769 C 229 0.00 478 reject_low 63 ALIGNMENT 0 YS2-18l08.p1k chr12 290 62 1076402 1076401 C 229 0.00 478 reject_low 302 ALIGNMENT 21 YS2-18l08.p1k chr14 435 459 1574 1598 F 25 96.00 478 reject_low 277 ALIGNMENT 24 YS2-18l08.p1k chr16 459 435 946470 946494 C 25 100.00 478 reject_low 215 ALIGNMENT 0 YS2-18l08.p1k chr16 290 62 946279 946278 C 229 0.00 478 reject_low 90 ALIGNMENT 0 YS2-18l08.p1k chr15 290 62 1089618 1089617 C 229 0.00 478 reject_low 55 ALIGNMENT 77 YS2-18l08.q1k chr12 46 205 1069720 1069879 F 160 85.62 506 reject_low 104,287 ALIGNMENT 21 YS2-18l08.q1k chr08 40 64 560817 560841 F 25 96.00 506 reject_low 270 ALIGNMENT 0 YS2-18l08.p1k chr09 62 290 1974 1973 F 229 0.00 478 reject_low 169 ALIGNMENT 357 YS2-18l08.p1k chr05 459 34 575149 575574 C 426 95.31 478 reject_low 14 ALIGNMENT 0 YS2-18l08.q1k chr07 198 506 1089167 1089166 F 309 0.00 506 reject_low 149,197 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946219 946218 C 19 0.00 478 reject_low 64 ALIGNMENT 59 YS2-18l08.p1k chr16 290 436 1734 1880 F 147 82.99 478 reject_low 187 ALIGNMENT 56 YS2-18l08.q1k chr12 40 208 1076341 1076509 F 169 80.47 506|13,0 reject_low 297 ALIGNMENT 0 YS2-18l08.q1k chr14 506 210 1826 1825 C 297 0.00 506 reject_low 124 ALIGNMENT 0 YS2-18l08.q1k chr12 506 210 7578 7577 C 297 0.00 506 reject_low 112,122 ALIGNMENT 0 YS2-18l08.q1k chr12 506 466 7070 7069 C 41 0.00 506 accept_tel 0 ALIGNMENT 0 YS2-18l08.p1k chr04 478 460 1530321 1530320 C 19 0.00 478 reject_low 13 ALIGNMENT 390 YS2-18l08.q1k chr09 462 40 1432 1854 C 423 98.11 506 reject_low 4 ALIGNMENT 0 YS2-18l08.q1k chr02 506 210 1954 1953 C 297 0.00 506 reject_low 109 ALIGNMENT 50 YS2-18l08.q1k chr12 40 197 1076305 1076462 F 158 79.75 506|13,0 reject_low 304 ALIGNMENT 95 YS2-18l08.p1k chr09 291 459 1830 1998 F 169 88.17 478 reject_low 88 ALIGNMENT 75 YS2-18l08.p1k chr10 363 459 1669 1765 F 97 94.85 478 reject_low 94 ALIGNMENT 77 YS2-18l08.p1k chr15 453 294 1089347 1089506 C 160 85.62 478 reject_low 135 ALIGNMENT 81 YS2-18l08.q1k chr16 205 40 1630 1795 C 166 85.54 506 reject_low 100 ALIGNMENT 59 YS2-18l08.p1k chr13 291 459 1847 2015 F 169 81.07 478 reject_low 158 ALIGNMENT 113 YS2-18l08.q1k chr05 40 208 575113 575281 F 169 91.72 506 reject_low 14 ALIGNMENT 0 YS2-18l08.p1k chr04 478 406 1530087 1530086 C 73 0.00 478 reject_low 247 ALIGNMENT 68 YS2-18l08.q1k chr08 58 208 560439 560589 F 151 84.77 506 reject_low 137 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 1726 1725 F 19 0.00 478 reject_low 76 ALIGNMENT 38 YS2-18l08.p1k chr12 405 291 1076287 1076401 C 115 80.87 478 reject_low 302 ALIGNMENT 0 YS2-18l08.p1k chr12 406 434 2194 7325 F 29 0.00 478 reject_low 177 ALIGNMENT 0 YS2-18l08.q1k chr07 209 506 1089106 1089105 F 298 0.00 506 reject_low 264 ALIGNMENT 0 YS2-18l08.p1k chr13 62 293 1814 1813 F 232 0.00 478 reject_low 123 ALIGNMENT 53 YS2-18l08.p1k chr13 302 459 1894 2051 F 158 80.38 478 reject_low 194 ALIGNMENT 24 YS2-18l08.q1k chr09 64 40 1686 1710 C 25 100.00 506 reject_low 256 ALIGNMENT 111 YS2-18l08.q1k chr09 172 40 1686 1818 C 133 96.99 506 reject_low 164 ALIGNMENT 96 YS2-18l08.q1k chr02 205 40 1597 1762 C 166 88.55 506 reject_low 66 ALIGNMENT 0 YS2-18l08.q1k chr05 506 209 1687 1686 C 298 0.00 506 reject_low 57 ALIGNMENT 87 YS2-18l08.q1k chr12 205 40 1902 2067 C 166 86.75 506|83,0 reject_low 290 ALIGNMENT 0 YS2-18l08.p1k chr12 62 301 1874 1873 F 240 0.00 478 reject_low 43 ALIGNMENT 0 YS2-18l08.p1k chr12 290 62 1069955 1069954 C 229 0.00 478 reject_low 81 ALIGNMENT 0 YS2-18l08.p1k chr12 62 290 1755 1754 F 229 0.00 478 reject_low 39 ALIGNMENT 0 YS2-18l08.p1k chr10 62 290 1813 1812 F 229 0.00 478 reject_low 62 ALIGNMENT 0 YS2-18l08.q1k chr07 209 506 1089358 1089357 F 298 0.00 506 reject_low 15 ALIGNMENT 0 YS2-18l08.p1k chr09 62 301 2021 2020 F 240 0.00 478 reject_low 231 ALIGNMENT 0 YS2-18l08.q1k chr16 198 506 946303 946302 F 309 0.00 506 reject_low 58 ALIGNMENT 104 YS2-18l08.q1k chr16 40 208 946254 946422 F 169 89.94 506 reject_low 7 ALIGNMENT 53 YS2-18l08.p1k chr07 423 291 1089082 1089214 C 133 82.71 478 reject_low 197 ALIGNMENT 357 YS2-18l08.p1k chr15 459 34 1089485 1089910 C 426 95.31 478 reject_low 18 ALIGNMENT 0 YS2-18l08.p1k chr08 478 460 560566 560565 C 19 0.00 478 reject_low 61 ALIGNMENT 0 YS2-18l08.q1k chr15 209 506 1089617 1089616 F 298 0.00 506 reject_low 18 ALIGNMENT 84 YS2-18l08.p1k chr12 459 294 1076413 1076578 C 166 86.14 478|12,0 reject_low 285 ALIGNMENT 0 YS2-18l08.q1k chr12 209 506 1076617 1076616 F 298 0.00 506 reject_low 288 ALIGNMENT 71 YS2-18l08.p1k chr08 459 302 560457 560614 C 158 84.18 478 reject_low 137 ALIGNMENT 41 YS2-18l08.q1k chr06 208 94 1001 1115 C 115 81.74 506 reject_low 179,198 ALIGNMENT 0 YS2-18l08.q1k chr09 506 209 1975 1974 C 298 0.00 506 reject_low 126,130 ALIGNMENT 0 YS2-18l08.p1k chr05 478 460 575150 575149 C 19 0.00 478 reject_low 14 ALIGNMENT 39 YS2-18l08.p1k chr10 399 459 1669 1729 F 61 90.16 478 reject_low 148,154 ALIGNMENT 105 YS2-18l08.p1k chr08 459 294 560565 560730 C 166 90.36 478 reject_low 61 ALIGNMENT 0 YS2-18l08.q1k chr12 124 125 7266 2054 C 0 0.00 506 reject_low 298 ALIGNMENT 101 YS2-18l08.q1k chr13 208 40 1739 1907 C 169 89.35 506 reject_low 53 ALIGNMENT 57 YS2-18l08.q1k chr05 136 40 1470 1566 C 97 88.66 506 reject_low 226 ALIGNMENT 0 YS2-18l08.p1k chr13 460 478 1835 1834 F 19 0.00 478 reject_low 11 ALIGNMENT 0 YS2-18l08.p1k chr09 62 301 1949 1948 F 240 0.00 478 reject_low 130 ALIGNMENT 0 YS2-18l08.p1k chr05 62 290 1830 1829 F 229 0.00 478 reject_low 236 ALIGNMENT 59 YS2-18l08.p1k chr16 291 459 1663 1831 F 169 81.07 478 reject_low 151 ALIGNMENT 0 YS2-18l08.q1k chr15 209 506 1089581 1089580 F 298 0.00 506 reject_low 55 ALIGNMENT 0 YS2-18l08.q1k chr12 198 506 1076462 1076461 F 309 0.00 506 reject_low 304 ALIGNMENT 0 YS2-18l08.p1k chr02 62 290 2098 2097 F 229 0.00 478 reject_low 110 ALIGNMENT 0 YS2-18l08.p1k chr08 478 460 560530 560529 C 19 0.00 478 reject_low 92 ALIGNMENT 38 YS2-18l08.p1k chr04 405 291 1530086 1530200 C 115 80.87 478 reject_low 247 ALIGNMENT 0 YS2-18l08.p1k chr12 478 460 1069679 1069678 C 19 0.00 478 reject_low 172 ALIGNMENT 0 YS2-18l08.q1k chr12 124 125 7266 1802 C 0 0.00 506 reject_low 289 ALIGNMENT 342 YS2-18l08.p1k chr08 34 459 1394 1819 F 426 94.13 478 reject_low 30 ALIGNMENT 0 YS2-18l08.p1k chr13 442 478 2069 2068 F 37 0.00 478 reject_low 175 ALIGNMENT 21 YS2-18l08.q1k chr13 64 40 1667 1691 C 25 96.00 506 reject_low 272 ALIGNMENT 21 YS2-18l08.q1k chr14 64 40 1574 1598 C 25 96.00 506 reject_low 273 ALIGNMENT 0 YS2-18l08.q1k chr08 506 466 1395 1394 C 41 0.00 506 reject_low 31 ALIGNMENT 0 YS2-18l08.q1k chr12 118 119 7272 2096 C 0 0.00 506 reject_low 300 ALIGNMENT 357 YS2-18l08.p1k chr12 459 34 1069858 1070283 C 426 95.31 478 reject_low 16 ALIGNMENT 0 YS2-18l08.p1k chr04 301 62 1530262 1530261 C 240 0.00 478 reject_low 201 ALIGNMENT 37 YS2-18l08.q1k chr16 208 99 1771 1880 C 110 80.91 506 reject_low 187,199 ALIGNMENT 0 YS2-18l08.p1k chr07 478 460 1089119 1089118 C 19 0.00 478 reject_low 96 ALIGNMENT 0 YS2-18l08.q1k chr08 506 173 1652 1651 C 334 0.00 506 reject_low 30 ALIGNMENT 0 YS2-18l08.q1k chr12 506 206 7474 7473 C 301 0.00 506 reject_low 97 ALIGNMENT 0 YS2-18l08.q1k chr05 506 209 1831 1830 C 298 0.00 506 reject_low 178,189 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 1873 1872 F 19 0.00 478 reject_low 37 ALIGNMENT 89 YS2-18l08.q1k chr16 40 208 946290 946458 F 169 86.98 506 reject_low 119 ALIGNMENT 0 YS2-18l08.q1k chr08 198 506 560614 560613 F 309 0.00 506 reject_low 128 ALIGNMENT 119 YS2-18l08.p1k chr10 291 459 1741 1909 F 169 92.90 478 reject_low 38 ALIGNMENT 0 YS2-18l08.p1k chr05 478 406 574916 574915 C 73 0.00 478 reject_low 237 ALIGNMENT 0 YS2-18l08.p1k chr02 62 301 1821 1820 F 240 0.00 478 reject_low 186 ALIGNMENT 0 YS2-18l08.p1k chr12 62 293 1902 1901 F 232 0.00 478 reject_low 65 ALIGNMENT 42 YS2-18l08.q1k chr05 100 40 1470 1530 C 61 91.80 506 reject_low 234 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 1981 1980 F 19 0.00 478 reject_low 62 ALIGNMENT 0 YS2-18l08.p1k chr15 293 62 1089543 1089542 C 232 0.00 478 reject_low 105 ALIGNMENT 0 YS2-18l08.p1k chr02 406 478 2392 2391 F 73 0.00 478 reject_low 251 ALIGNMENT 0 YS2-18l08.p1k chr05 478 460 574970 574969 C 19 0.00 478 reject_low 156 ALIGNMENT 0 YS2-18l08.p1k chr08 478 460 560746 560745 C 19 0.00 478 reject_low 20,113 ALIGNMENT 0 YS2-18l08.p1k chr05 62 398 1470 1469 F 337 0.00 478 reject_low 188 ALIGNMENT 0 YS2-18l08.q1k chr10 506 209 1850 1849 C 298 0.00 506 reject_low 154 ALIGNMENT 0 YS2-18l08.p1k chr05 62 290 1506 1505 F 229 0.00 478 reject_low 45 ALIGNMENT 68 YS2-18l08.q1k chr02 208 58 2242 2392 C 151 84.77 506 reject_low 136 ALIGNMENT 0 YS2-18l08.q1k chr09 506 101 1687 1686 C 406 0.00 506 reject_low 245 ALIGNMENT 0 YS2-18l08.p1k chr12 293 62 1069880 1069879 C 232 0.00 478 reject_low 134 ALIGNMENT 0 YS2-18l08.p1k chr04 290 62 1530417 1530416 C 229 0.00 478 reject_low 77 ALIGNMENT 0 YS2-18l08.p1k chr08 62 301 1806 1805 F 240 0.00 478 reject_low 253 ALIGNMENT 92 YS2-18l08.p1k chr10 302 459 2004 2161 F 158 88.61 478 reject_low 89 ALIGNMENT 56 YS2-18l08.p1k chr15 459 291 1089305 1089473 C 169 80.47 478 reject_low 173 ALIGNMENT 345 YS2-18l08.q1k chr08 465 40 1394 1819 C 426 94.37 506 reject_low 31 ALIGNMENT 64 YS2-18l08.q1k chr13 209 58 1918 2069 C 152 83.55 506 reject_low 123 ALIGNMENT 0 YS2-18l08.p1k chr16 301 62 946160 946159 C 240 0.00 478 reject_low 196 ALIGNMENT 0 YS2-18l08.p1k chr12 289 62 1069776 1069775 C 228 0.00 478 reject_low 223 ALIGNMENT 84 YS2-18l08.q1k chr12 205 40 7437 7602 C 166 86.14 506 reject_low 65,75,80 ALIGNMENT 0 YS2-18l08.p1k chr02 460 478 1906 1905 F 19 0.00 478 reject_low 145 ALIGNMENT 84 YS2-18l08.p1k chr05 459 294 575041 575206 C 166 86.14 478 reject_low 95 ALIGNMENT 0 YS2-18l08.q1k chr12 53 52 1070015 1076497 F 0 0.00 506 reject_low 286 ALIGNMENT 84 YS2-18l08.p1k chr14 294 459 1685 1850 F 166 86.14 478 reject_low 99 ALIGNMENT 0 YS2-18l08.q1k chr12 210 506 1069775 1069774 F 297 0.00 506 reject_low 134,295 ALIGNMENT 0 YS2-18l08.p1k chr10 460 478 1729 1728 F 19 0.00 478 reject_low 148,154 ALIGNMENT 0 YS2-18l08.q1k chr15 210 506 1089402 1089401 F 297 0.00 506 reject_low 135 ALIGNMENT 75 YS2-18l08.q1k chr10 136 40 1669 1765 C 97 94.85 506 reject_low 208 ALIGNMENT 0 YS2-18l08.p1k chr14 460 478 1850 1849 F 19 0.00 478 reject_low 99 ALIGNMENT 45 YS2-18l08.p1k chr06 327 459 893 1025 F 133 80.45 478 reject_low 191 ALIGNMENT 95 YS2-18l08.p1k chr12 291 459 1827 1995 F 169 88.17 478 reject_low 282 ALIGNMENT 113 YS2-18l08.p1k chr15 459 291 1089449 1089617 C 169 91.72 478 reject_low 55 ALIGNMENT 59 YS2-18l08.q1k chr16 40 208 946038 946206 F 169 81.07 506 reject_low 183 ALIGNMENT 0 YS2-18l08.q1k chr13 506 137 1668 1667 C 370 0.00 506 reject_low 228 ALIGNMENT 0 YS2-18l08.p1k chr08 442 478 1909 1908 F 37 0.00 478 reject_low 214 ALIGNMENT 0 YS2-18l08.q1k chr15 198 506 1089426 1089425 F 309 0.00 506 reject_low 173 ALIGNMENT 111 YS2-18l08.q1k chr10 172 40 1669 1801 C 133 96.99 506 reject_low 165 ALIGNMENT 0 YS2-18l08.p1k chr14 62 290 1610 1609 F 229 0.00 478 reject_low 54 ALIGNMENT 42 YS2-18l08.q1k chr12 100 40 1683 1743 C 61 91.80 506|30,0 reject_low 308 ALIGNMENT 0 YS2-18l08.p1k chr02 62 290 1630 1629 F 229 0.00 478 reject_low 60 ALIGNMENT 0 YS2-18l08.q1k chr06 506 198 977 976 C 309 0.00 506 reject_low 32 ALIGNMENT 101 YS2-18l08.q1k chr05 40 208 575077 575245 F 169 89.35 506 reject_low 48 ALIGNMENT 61 YS2-18l08.p1k chr15 441 290 1089251 1089402 C 152 82.89 478 reject_low 224 ALIGNMENT 0 YS2-18l08.p1k chr10 62 434 1669 1668 F 373 0.00 478 reject_low 263 ALIGNMENT 0 YS2-18l08.p1k chr16 62 290 1555 1554 F 229 0.00 478 reject_low 85 ALIGNMENT 0 YS2-18l08.p1k chr15 362 62 1089654 1089653 C 301 0.00 478 reject_low 25,168 ALIGNMENT 0 YS2-18l08.p1k chr16 478 460 946183 946182 C 19 0.00 478 reject_low 74 ALIGNMENT 64 YS2-18l08.q1k chr14 209 58 1825 1976 C 152 83.55 506 reject_low 124 ALIGNMENT 29 YS2-18l08.p1k chr08 302 405 1806 1909 F 104 78.85 478 reject_low 253 ALIGNMENT 0 YS2-18l08.p1k chr12 478 460 1069823 1069822 C 19 0.00 478 reject_low 52 ALIGNMENT 0 YS2-18l08.q1k chr09 97 62 2085 2084 C 36 0.00 506 reject_low 126,130 ALIGNMENT 0 YS2-18l08.p1k chr16 460 478 1759 1758 F 19 0.00 478 reject_low 100 ALIGNMENT 0 YS2-18l08.p1k chr05 290 62 575282 575281 C 229 0.00 478 reject_low 48 ALIGNMENT 0 YS2-18l08.p1k chr04 434 62 1530489 1530488 C 373 0.00 478 reject_low 209 ALIGNMENT 954 YS2-18l09.q1k chr14 1132 39 381376 382482 C 1094 97.53 1300 accept_chi 0 ALIGNMENT 163 YS2-18l09.p1k chr14 31 211 749926 750107 F 181 97.79 1437 accept_chi 1 ALIGNMENT 42 YS2-18l10.q1k vc_3 403 362 2472 2513 C 42 100.00 403 reject_low 2 ALIGNMENT 36 YS2-18l10.q1k vc_5 400 365 1 36 C 36 100.00 403 reject_low 6 ALIGNMENT 0 YS2-18l10.q1k vc_4 62 361 5830 5829 F 300 0.00 403 reject_low 3 ALIGNMENT 309 YS2-18l10.q1k chr13 22 363 480010 480353 F 342 98.54 403 accept 0 ALIGNMENT 0 YS2-18l10.q1k chr13 364 403 480353 480352 F 40 0.00 403 accept 0 ALIGNMENT 42 YS2-18l10.q1k vc_4 362 403 5830 5871 F 42 100.00 403 reject_low 3 ALIGNMENT 0 YS2-18l10.q1k vc_5 364 62 5064 5063 C 303 0.00 403 reject_low 4 ALIGNMENT 0 YS2-18l10.q1k vc_1 361 62 2514 2513 C 300 0.00 403 reject_low 1 ALIGNMENT 0 YS2-18l10.q1k vc_7 62 365 13525 13524 F 304 0.00 403 reject_low 5 ALIGNMENT 0 YS2-18l10.q1k vc_3 361 62 2514 2513 C 300 0.00 403 reject_low 2 ALIGNMENT 42 YS2-18l10.q1k vc_1 403 362 2472 2513 C 42 100.00 403 reject_low 1 ALIGNMENT 0 YS2-18l10.q1k vc_5 364 62 37 36 C 303 0.00 403 reject_low 6 ALIGNMENT 38 YS2-18l10.q1k vc_7 366 403 13525 13562 F 38 100.00 403 reject_low 5 ALIGNMENT 39 YS2-18l10.q1k vc_5 403 365 5025 5063 C 39 100.00 403 reject_low 4 ALIGNMENT 946 YS2-18l12.p1k chr15 31 1123 797809 798913 F 1093 96.98 1454 accept 0 ALIGNMENT 1050 YS2-18l12.q1k chr15 1227 35 801499 802705 C 1193 96.73 1239 accept 0 ALIGNMENT 993 YS2-18l13.q1k chr04 30 1111 285429 286518 F 1082 97.97 1248 accept 0 ALIGNMENT 900 YS2-18l13.p1k chr04 1033 32 286485 287504 C 1002 97.50 1405 accept 0 ALIGNMENT 853 YS2-18l14.p1k chr07 35 949 598245 599168 F 915 98.47 1363 accept 0 ALIGNMENT 1010 YS2-18l14.q1k chr07 1274 42 599299 600538 C 1233 95.30 1282 accept 0 ALIGNMENT 0 YS2-18l15.q1k vc_2 396 62 2146 2145 C 335 0.00 437 reject_low 3 ALIGNMENT 41 YS2-18l15.q1k vc_1 437 397 2472 2512 C 41 100.00 437 reject_low 2 ALIGNMENT 41 YS2-18l15.q1k vc_3 437 397 2472 2512 C 41 100.00 437 reject_low 4 ALIGNMENT 41 YS2-18l15.q1k vc_4 397 437 5831 5871 F 41 100.00 437 reject_low 5 ALIGNMENT 349 YS2-18l15.p1k chr02 400 39 709555 709916 C 362 99.45 417 accept_chi 1 ALIGNMENT 0 YS2-18l15.q1k vc_1 396 62 2513 2512 C 335 0.00 437 reject_low 2 ALIGNMENT 41 YS2-18l15.q1k vc_2 437 397 2105 2145 C 41 100.00 437 reject_low 3 ALIGNMENT 0 YS2-18l15.q1k vc_4 62 396 5831 5830 F 335 0.00 437 reject_low 5 ALIGNMENT 0 YS2-18l15.q1k vc_7 62 399 13525 13524 F 338 0.00 437 reject_low 7 ALIGNMENT 0 YS2-18l15.q1k vc_5 398 62 5064 5063 C 337 0.00 437 reject_low 6 ALIGNMENT 36 YS2-18l15.q1k vc_5 434 399 1 36 C 36 100.00 437 reject_low 8 ALIGNMENT 0 YS2-18l15.q1k vc_5 398 62 37 36 C 337 0.00 437 reject_low 8 ALIGNMENT 0 YS2-18l15.p1k chr02 417 401 709556 709555 C 17 0.00 417 accept_chi 1 ALIGNMENT 350 YS2-18l15.q1k chr02 36 396 709555 709916 F 361 99.72 437 accept_chi 0 ALIGNMENT 39 YS2-18l15.q1k vc_5 437 399 5025 5063 C 39 100.00 437 reject_low 6 ALIGNMENT 38 YS2-18l15.q1k vc_7 400 437 13525 13562 F 38 100.00 437 reject_low 7 ALIGNMENT 0 YS2-18l15.q1k vc_3 396 62 2513 2512 C 335 0.00 437 reject_low 4 ALIGNMENT 0 YS2-18l15.q1k chr02 397 437 709916 709915 F 41 0.00 437 accept_chi 0 ALIGNMENT 949 YS2-18l16.q1k chr04 44 1174 1284067 1285209 F 1131 96.20 1254 accept 0 ALIGNMENT 1041 YS2-18l16.p1k chr04 1210 28 1286289 1287475 C 1183 95.86 1479 accept 0 ALIGNMENT 0 YS2-18l17.q1k vc_5 312 62 37 36 C 251 0.00 351 reject_low 8 ALIGNMENT 36 YS2-18l17.q1k vc_5 348 313 1 36 C 36 100.00 351 reject_low 8 ALIGNMENT 41 YS2-18l17.q1k vc_4 311 351 5831 5871 F 41 100.00 351 reject_low 5 ALIGNMENT 41 YS2-18l17.q1k vc_2 351 311 2105 2145 C 41 100.00 351 reject_low 3 ALIGNMENT 0 YS2-18l17.q1k vc_4 62 310 5831 5830 F 249 0.00 351 reject_low 5 ALIGNMENT 0 YS2-18l17.q1k vc_3 310 62 2513 2512 C 249 0.00 351 reject_low 4 ALIGNMENT 0 YS2-18l17.q1k vc_5 312 62 5064 5063 C 251 0.00 351 reject_low 6 ALIGNMENT 41 YS2-18l17.q1k vc_1 351 311 2472 2512 C 41 100.00 351 reject_low 2 ALIGNMENT 0 YS2-18l17.q1k chr15 311 351 1005399 1005398 F 41 0.00 351 accept_chi 1 ALIGNMENT 0 YS2-18l17.q1k vc_7 62 313 13525 13524 F 252 0.00 351 reject_low 7 ALIGNMENT 0 YS2-18l17.q1k vc_2 310 62 2146 2145 C 249 0.00 351 reject_low 3 ALIGNMENT 0 YS2-18l17.q1k vc_1 310 62 2513 2512 C 249 0.00 351 reject_low 2 ALIGNMENT 263 YS2-18l17.p1k chr15 304 34 1005129 1005399 C 271 99.63 323 accept_chi 0 ALIGNMENT 41 YS2-18l17.q1k vc_3 351 311 2472 2512 C 41 100.00 351 reject_low 4 ALIGNMENT 262 YS2-18l17.q1k chr15 39 310 1005129 1005399 F 272 99.63 351 accept_chi 1 ALIGNMENT 0 YS2-18l17.p1k chr15 323 305 1005130 1005129 C 19 0.00 323 accept_chi 0 ALIGNMENT 39 YS2-18l17.q1k vc_5 351 313 5025 5063 C 39 100.00 351 reject_low 6 ALIGNMENT 38 YS2-18l17.q1k vc_7 314 351 13525 13562 F 38 100.00 351 reject_low 7 ALIGNMENT 995 YS2-18l18.p1k chr10 32 1119 556259 557360 F 1088 98.16 1438 accept 0 ALIGNMENT 978 YS2-18l18.q1k chr10 1170 40 556363 557516 C 1131 96.73 1244 accept 0 ALIGNMENT 516 YS2-18l20.p1k chr15 558 30 202739 203267 C 529 99.24 577 accept_chi 0 ALIGNMENT 41 YS2-18l20.q1k vc_4 558 598 5831 5871 F 41 100.00 598 reject_low 4 ALIGNMENT 0 YS2-18l20.q1k vc_5 559 62 37 36 C 498 0.00 598 reject_low 7 ALIGNMENT 38 YS2-18l20.q1k vc_7 561 598 13525 13562 F 38 100.00 598 reject_low 6 ALIGNMENT 0 YS2-18l20.q1k vc_1 557 62 2513 2512 C 496 0.00 598 reject_low 2 ALIGNMENT 0 YS2-18l20.q1k vc_3 557 62 2513 2512 C 496 0.00 598 reject_low 3 ALIGNMENT 41 YS2-18l20.q1k vc_3 598 558 2472 2512 C 41 100.00 598 reject_low 3 ALIGNMENT 0 YS2-18l20.q1k vc_7 62 560 13525 13524 F 499 0.00 598 reject_low 6 ALIGNMENT 0 YS2-18l20.q1k vc_5 559 62 5064 5063 C 498 0.00 598 reject_low 5 ALIGNMENT 39 YS2-18l20.q1k vc_5 598 560 5025 5063 C 39 100.00 598 reject_low 5 ALIGNMENT 516 YS2-18l20.q1k chr15 30 558 202739 203267 F 529 99.24 598 accept_chi 1 ALIGNMENT 41 YS2-18l20.q1k vc_1 598 558 2472 2512 C 41 100.00 598 reject_low 2 ALIGNMENT 0 YS2-18l20.q1k chr15 559 598 203267 203266 F 40 0.00 598 accept_chi 1 ALIGNMENT 36 YS2-18l20.q1k vc_5 595 560 1 36 C 36 100.00 598 reject_low 7 ALIGNMENT 0 YS2-18l20.q1k vc_4 62 557 5831 5830 F 496 0.00 598 reject_low 4 ALIGNMENT 0 YS2-18l20.p1k chr15 577 559 202740 202739 C 19 0.00 577 accept_chi 0 ALIGNMENT 1030 YS2-18l21.p1k chr10 1230 33 450074 451283 C 1198 96.74 1423 accept 0 ALIGNMENT 922 YS2-18l21.q1k chr10 37 1139 448086 449198 F 1103 95.47 1268 accept 0 ALIGNMENT 973 YS2-18l22.p1k chr12 31 1120 457580 458665 F 1090 97.34 1395 accept 0 ALIGNMENT 973 YS2-18l22.p1k chr12 31 1120 466717 467802 F 1090 97.34 1395 accept 1 ALIGNMENT 1018 YS2-18l23.q1k chr02 31 1158 235667 236801 F 1128 97.61 1164 accept 0 ALIGNMENT 956 YS2-18l23.p1k chr02 1120 31 239478 240581 C 1090 96.79 1355 accept 0 ALIGNMENT 0 YS2-18l23.p1k chr04 883 547 451341 451340 C 337 0.00 1355 reject_low 2 ALIGNMENT 0 YS2-18l23.q1k chr04 870 168 914695 915515 C 703 0.00 1164 reject_low 1 ALIGNMENT 120 YS2-18l23.q1k chr04 1150 871 914409 914694 C 280 81.43 1164 reject_low 1 ALIGNMENT 123 YS2-18l23.q1k chr04 167 32 915516 915651 C 136 97.06 1164 reject_low 1 ALIGNMENT 176 YS2-18l23.p1k chr04 546 35 451340 451851 C 512 78.91 1355 reject_low 2 ALIGNMENT 974 YS2-18l24.q1k chr14 37 1165 210491 211625 F 1129 96.46 1175 accept 0 ALIGNMENT 944 YS2-18l24.p1k chr14 1132 33 213460 214573 C 1100 96.64 1363 accept 0 ALIGNMENT 1016 YS2-18m01.q1k chr16 1193 49 870568 871716 C 1145 97.21 1218 accept_chi 1 ALIGNMENT 1033 YS2-18m01.p1k chr05 1171 38 88103 89242 C 1134 97.62 1374 accept_chi 0 ALIGNMENT 1016 YS2-18m02.q1k chr11 38 1224 543607 544803 F 1187 96.38 1236 accept 0 ALIGNMENT 977 YS2-18m02.p1k chr11 1167 34 546859 548001 C 1134 96.30 1416 accept 0 ALIGNMENT 0 YS2-18m03.q1k chr04 663 895 309510 309509 F 233 0.00 1246 reject_low 1 ALIGNMENT 413 YS2-18m03.q1k chr04 39 564 308861 309387 F 526 93.16 1246 reject_low 1 ALIGNMENT 22 YS2-18m03.q1k chr04 627 662 309474 309510 F 36 88.89 1246 reject_low 1 ALIGNMENT 1026 YS2-18m03.q1k chr13 1243 39 549524 550732 C 1205 95.68 1246 accept 0 ALIGNMENT 0 YS2-18m03.q1k chr04 565 626 309388 309473 F 62 0.00 1246 reject_low 1 ALIGNMENT 944 YS2-18m03.p1k chr13 34 1062 548835 549876 F 1029 98.15 1331 accept 0 ALIGNMENT 1037 YS2-18m05.p1k chr12 1178 32 454327 455482 C 1147 97.65 1405 reject_low 1 ALIGNMENT 818 YS2-18m05.q1k chr12 29 1201 460063 461284 F 1173 91.39 1299 accept 0 ALIGNMENT 480 YS2-18m05.q1k chr12 497 1201 451419 452147 F 705 90.92 1299 reject_low 1 ALIGNMENT 1037 YS2-18m05.p1k chr12 1178 32 463464 464619 C 1147 97.65 1405 accept 0 ALIGNMENT 0 YS2-18m05.q1k chr12 62 496 451419 451418 F 435 0.00 1299 reject_low 1 ALIGNMENT 0 YS2-18m05.q1k chr12 62 851 489754 489753 F 790 0.00 1299 reject_low 2 ALIGNMENT 201 YS2-18m05.q1k chr12 852 1201 489754 490115 F 350 86.86 1299 reject_low 2 ALIGNMENT 0 YS2-18m06.q1k chr13 62 229 359791 359790 F 168 0.00 1330 reject_low 41 ALIGNMENT 189 YS2-18m06.q1k chr13 230 862 375489 376121 F 633 77.73 1330 reject_low 48 ALIGNMENT 243 YS2-18m06.q1k chr13 230 1141 359791 360704 F 912 75.66 1330 reject_low 41 ALIGNMENT 244 YS2-18m06.q1k chr10 1141 324 480180 480999 C 818 76.41 1330 ambiguous_trans_ua 13 ALIGNMENT 244 YS2-18m06.q1k chr16 324 1141 807524 808343 F 818 76.41 1330 reject_low 44 ALIGNMENT 0 YS2-18m06.q1k chr13 863 881 376121 376120 F 19 0.00 1330 reject_low 48 ALIGNMENT 791 YS2-18m06.p1k chr04 30 1078 985659 986732 F 1049 94.18 1387 reject_low 29 ALIGNMENT 0 YS2-18m06.q1k chr10 229 62 475510 475509 C 168 0.00 1330 reject_low 39 ALIGNMENT 246 YS2-18m06.q1k chr02 1141 230 223255 224168 C 912 75.77 1330 reject_low 38 ALIGNMENT 985 YS2-18m06.q1k chr02 1245 32 31725 32953 C 1214 94.15 1330 ambiguous_trans 11 ALIGNMENT 327 YS2-18m06.p1k chr10 30 749 482416 483135 F 720 83.75 1387 reject_low 37 ALIGNMENT 884 YS2-18m06.p1k chr04 1078 30 514076 515149 C 1049 97.14 1387 reject_low 19 ALIGNMENT 893 YS2-18m06.p1k chr07 1078 30 569136 570209 C 1049 97.43 1387 ambiguous_trans 16 ALIGNMENT 884 YS2-18m06.p1k chr15 30 1078 974776 975849 F 1049 97.14 1387 reject_low 20 ALIGNMENT 1033 YS2-18m06.q1k chr12 30 1245 978382 979612 F 1216 95.39 1330 ambiguous_trans 1 ALIGNMENT 1038 YS2-18m06.q1k chr07 30 1245 571389 572620 F 1216 95.56 1330 ambiguous_trans 0 ALIGNMENT 773 YS2-18m06.p1k chr12 30 1078 597598 598671 F 1049 93.61 1387 reject_low 31 ALIGNMENT 0 YS2-18m06.q1k chr16 229 62 847544 847543 C 168 0.00 1330 reject_low 46 ALIGNMENT 1006 YS2-18m06.q1k chr15 1245 32 972366 973594 C 1214 94.73 1330 ambiguous_trans 9 ALIGNMENT 646 YS2-18m06.p1k chr08 1014 30 544077 545074 C 985 90.66 1387 reject_low 34 ALIGNMENT 773 YS2-18m06.p1k chr16 1078 30 805034 806107 C 1049 93.61 1387 reject_low 32 ALIGNMENT 1015 YS2-18m06.q1k chr06 1245 30 139992 141222 C 1216 94.90 1330 ambiguous_trans 3 ALIGNMENT 0 YS2-18m06.q1k chr12 62 323 478861 478860 F 262 0.00 1330 reject_low 45 ALIGNMENT 0 YS2-18m06.p1k chr10 750 871 483135 483134 F 122 0.00 1387 reject_low 37 ALIGNMENT 202 YS2-18m06.q1k chr16 230 989 853418 854179 F 760 76.45 1330 reject_low 47 ALIGNMENT 640 YS2-18m06.p1k chr16 1014 30 851098 852095 C 985 90.46 1387 reject_low 36 ALIGNMENT 893 YS2-18m06.p1k chr07 30 1078 815946 817019 F 1049 97.43 1387 ambiguous_trans 17 ALIGNMENT 235 YS2-18m06.q1k chr16 1141 230 846627 847543 C 912 75.77 1330 reject_low 46 ALIGNMENT 867 YS2-18m06.p1k chr15 1078 30 704456 705529 C 1049 96.57 1387 reject_low 24 ALIGNMENT 243 YS2-18m06.q1k chr13 1141 230 186383 187296 C 912 75.66 1330 reject_low 40 ALIGNMENT 0 YS2-18m06.q1k chr13 229 62 187297 187296 C 168 0.00 1330 reject_low 40 ALIGNMENT 1013 YS2-18m06.q1k chr15 32 1245 706711 707939 F 1214 94.89 1330 ambiguous_trans 5 ALIGNMENT 0 YS2-18m06.q1k chr13 323 62 199370 199369 C 262 0.00 1330 reject_low 25 ALIGNMENT 1010 YS2-18m06.q1k chr04 32 1245 516331 517559 F 1214 94.81 1330 ambiguous_trans 6 ALIGNMENT 893 YS2-18m06.p1k chr06 30 1078 142402 143475 F 1049 97.43 1387 ambiguous_trans 15 ALIGNMENT 893 YS2-18m06.p1k chr03 30 1078 89304 90377 F 1049 97.43 1387 ambiguous_trans 14 ALIGNMENT 0 YS2-18m06.q1k chr13 62 229 375489 375488 F 168 0.00 1330 reject_low 48 ALIGNMENT 722 YS2-18m06.p1k chr10 30 1078 476832 477905 F 1049 91.99 1387 ambiguous_trans_ua 13 ALIGNMENT 985 YS2-18m06.q1k chr04 1245 32 983249 984477 C 1214 94.15 1330 ambiguous_trans 12 ALIGNMENT 0 YS2-18m06.q1k chr16 62 323 807524 807523 F 262 0.00 1330 reject_low 44 ALIGNMENT 0 YS2-18m06.q1k chr05 62 229 495284 495283 F 168 0.00 1330 reject_low 49 ALIGNMENT 0 YS2-18m06.q1k chr05 863 881 495916 495915 F 19 0.00 1330 reject_low 49 ALIGNMENT 186 YS2-18m06.q1k chr05 230 862 495284 495916 F 633 77.57 1330 reject_low 49 ALIGNMENT 818 YS2-18m06.p1k chr14 30 1078 523597 524670 F 1049 95.04 1387 reject_low 28 ALIGNMENT 646 YS2-18m06.p1k chr16 30 1014 848866 849863 F 985 90.66 1387 reject_low 35 ALIGNMENT 241 YS2-18m06.q1k chr12 324 1141 478861 479680 F 818 76.28 1330 reject_low 45 ALIGNMENT 0 YS2-18m06.q1k chr16 62 229 853418 853417 F 168 0.00 1330 reject_low 47 ALIGNMENT 887 YS2-18m06.p1k chr14 1078 30 562425 563498 C 1049 97.24 1387 reject_low 18 ALIGNMENT 646 YS2-18m06.p1k chr13 30 1014 188619 189616 F 985 90.66 1387 reject_low 25 ALIGNMENT 872 YS2-18m06.p1k chr04 30 1078 876310 877383 F 1049 96.76 1387 reject_low 23 ALIGNMENT 0 YS2-18m06.q1k chr05 62 323 446279 446278 F 262 0.00 1330 reject_low 42 ALIGNMENT 0 YS2-18m06.q1k chr02 229 62 224169 224168 C 168 0.00 1330 reject_low 38 ALIGNMENT 653 YS2-18m06.p1k chr13 30 1078 200786 201859 F 1049 89.80 1387 reject_low 33 ALIGNMENT 0 YS2-18m06.q1k chr15 323 62 597854 597853 C 262 0.00 1330 reject_low 43 ALIGNMENT 244 YS2-18m06.q1k chr05 324 1141 446279 447098 F 818 76.41 1330 reject_low 42 ALIGNMENT 1030 YS2-18m06.q1k chr14 30 1245 564678 565908 F 1216 95.31 1330 ambiguous_trans 2 ALIGNMENT 1003 YS2-18m06.q1k chr03 1245 30 86894 88124 C 1216 94.57 1330 ambiguous_trans 8 ALIGNMENT 875 YS2-18m06.p1k chr02 30 1078 34135 35208 F 1049 96.85 1387 reject_low 22 ALIGNMENT 244 YS2-18m06.q1k chr15 1141 324 597034 597853 C 818 76.41 1330 reject_low 43 ALIGNMENT 773 YS2-18m06.p1k chr07 1078 30 562240 563313 C 1049 93.61 1387 reject_low 30 ALIGNMENT 881 YS2-18m06.p1k chr12 30 1078 945683 946756 F 1049 97.04 1387 reject_low 21 ALIGNMENT 1009 YS2-18m06.q1k chr04 1245 32 873900 875128 C 1214 94.81 1330 ambiguous_trans 7 ALIGNMENT 991 YS2-18m06.q1k chr12 1245 32 943273 944501 C 1214 94.32 1330 ambiguous_trans 10 ALIGNMENT 246 YS2-18m06.q1k chr10 1141 230 474596 475509 C 912 75.77 1330 reject_low 39 ALIGNMENT 0 YS2-18m06.q1k chr10 323 62 481000 480999 C 262 0.00 1330 ambiguous_trans_ua 13 ALIGNMENT 818 YS2-18m06.p1k chr04 1078 30 878691 879764 C 1049 95.04 1387 reject_low 27 ALIGNMENT 830 YS2-18m06.p1k chr04 1078 30 645890 646963 C 1049 95.42 1387 reject_low 26 ALIGNMENT 1015 YS2-18m06.q1k chr07 1245 30 813536 814766 C 1216 94.90 1330 ambiguous_trans 4 ALIGNMENT 244 YS2-18m06.q1k chr13 1141 324 198550 199369 C 818 76.41 1330 reject_low 25 ALIGNMENT 940 YS2-18m07.p1k chr04 51 1189 164091 165246 F 1139 95.61 1480 accept 0 ALIGNMENT 906 YS2-18m07.q1k chr04 1085 32 167686 168754 C 1054 96.96 1344 accept 0 ALIGNMENT 0 YS2-18m09.p1k chr13 62 674 226280 226279 F 613 0.00 1355 reject_low 1 ALIGNMENT 249 YS2-18m09.p1k chr13 675 1068 226280 226682 F 394 87.82 1355 reject_low 1 ALIGNMENT 913 YS2-18m09.p1k chr04 1081 30 1354818 1355879 C 1052 96.29 1355 accept 0 ALIGNMENT 1005 YS2-18m09.q1k chr04 39 1209 1350519 1351702 F 1171 95.90 1288 accept 0 ALIGNMENT 542 YS2-18m11.p1k scplasm1 671 2 5628 6318 C 670 95.67 910 accept_chi 2 ALIGNMENT 938 YS2-18m11.q1k chr04 1151 45 378342 379466 C 1107 96.21 1171 accept_chi 0 ALIGNMENT 543 YS2-18m11.p1k vc_6 671 1 5321 6012 C 671 95.68 910 reject_vc 1 ALIGNMENT 297 YS2-18m12.p1k chr10 340 31 497313 497623 C 310 99.68 359 accept_chi 0 ALIGNMENT 0 YS2-18m12.q1k vc_5 349 62 5064 5063 C 288 0.00 388 reject_low 6 ALIGNMENT 0 YS2-18m12.p1k chr10 359 341 497314 497313 C 19 0.00 359 accept_chi 0 ALIGNMENT 0 YS2-18m12.q1k vc_4 62 347 5831 5830 F 286 0.00 388 reject_low 5 ALIGNMENT 0 YS2-18m12.q1k vc_5 349 62 37 36 C 288 0.00 388 reject_low 8 ALIGNMENT 0 YS2-18m12.q1k vc_7 62 350 13525 13524 F 289 0.00 388 reject_low 7 ALIGNMENT 0 YS2-18m12.q1k vc_1 347 62 2513 2512 C 286 0.00 388 reject_low 2 ALIGNMENT 41 YS2-18m12.q1k vc_1 388 348 2472 2512 C 41 100.00 388 reject_low 2 ALIGNMENT 38 YS2-18m12.q1k vc_7 351 388 13525 13562 F 38 100.00 388 reject_low 7 ALIGNMENT 0 YS2-18m12.q1k chr10 348 388 497623 497622 F 41 0.00 388 accept_chi 1 ALIGNMENT 41 YS2-18m12.q1k vc_4 348 388 5831 5871 F 41 100.00 388 reject_low 5 ALIGNMENT 41 YS2-18m12.q1k vc_3 388 348 2472 2512 C 41 100.00 388 reject_low 4 ALIGNMENT 36 YS2-18m12.q1k vc_5 385 350 1 36 C 36 100.00 388 reject_low 8 ALIGNMENT 292 YS2-18m12.q1k chr10 39 347 497313 497623 F 309 99.35 388 accept_chi 1 ALIGNMENT 0 YS2-18m12.q1k vc_3 347 62 2513 2512 C 286 0.00 388 reject_low 4 ALIGNMENT 39 YS2-18m12.q1k vc_5 388 350 5025 5063 C 39 100.00 388 reject_low 6 ALIGNMENT 0 YS2-18m12.q1k vc_2 347 62 2146 2145 C 286 0.00 388 reject_low 3 ALIGNMENT 41 YS2-18m12.q1k vc_2 388 348 2105 2145 C 41 100.00 388 reject_low 3 ALIGNMENT 0 YS2-18m13.p1k chr12 525 884 468930 468929 F 360 0.00 1447 reject_low 2 ALIGNMENT 119 YS2-18m13.p1k chr12 406 524 485696 485814 F 119 100.00 1447 reject_low 8 ALIGNMENT 359 YS2-18m13.p1k chr12 337 738 459606 460016 F 402 97.26 1447 reject_low 3 ALIGNMENT 0 YS2-18m13.p1k chr12 525 884 482162 482161 F 360 0.00 1447 reject_low 7 ALIGNMENT 119 YS2-18m13.p1k chr12 406 524 472464 472582 F 119 100.00 1447 reject_low 6 ALIGNMENT 0 YS2-18m13.p1k chr06 884 147 31623 31622 C 738 0.00 1447 reject_low 4 ALIGNMENT 0 YS2-18m13.p1k chr12 525 884 472582 472581 F 360 0.00 1447 reject_low 6 ALIGNMENT 0 YS2-18m13.p1k chr12 540 884 489481 489480 F 345 0.00 1447 reject_low 5 ALIGNMENT 1019 YS2-18m13.q1k chr12 1208 41 453407 454570 C 1168 96.49 1233 reject_low 1 ALIGNMENT 119 YS2-18m13.p1k chr12 406 524 482044 482162 F 119 100.00 1447 reject_low 7 ALIGNMENT 0 YS2-18m13.p1k chr12 525 884 485814 485813 F 360 0.00 1447 reject_low 8 ALIGNMENT 470 YS2-18m13.p1k chr12 37 524 468443 468930 F 488 99.80 1447 reject_low 2 ALIGNMENT 0 YS2-18m13.p1k chr12 62 405 482044 482043 F 344 0.00 1447 reject_low 7 ALIGNMENT 0 YS2-18m13.p1k chr12 739 884 460016 460015 F 146 0.00 1447 reject_low 3 ALIGNMENT 892 YS2-18m13.p1k chr12 37 1216 459306 460530 F 1180 93.81 1447 accept 0 ALIGNMENT 1019 YS2-18m13.q1k chr12 1208 41 462544 463707 C 1168 96.49 1233 accept 0 ALIGNMENT 0 YS2-18m13.p1k chr12 62 405 489348 489347 F 344 0.00 1447 reject_low 5 ALIGNMENT 0 YS2-18m13.p1k chr12 62 405 472464 472463 F 344 0.00 1447 reject_low 6 ALIGNMENT 94 YS2-18m13.p1k chr06 146 39 31622 31729 C 108 98.15 1447 reject_low 4 ALIGNMENT 0 YS2-18m13.p1k chr12 62 336 459606 459605 F 275 0.00 1447 reject_low 3 ALIGNMENT 128 YS2-18m13.p1k chr12 406 539 489348 489481 F 134 98.51 1447 reject_low 5 ALIGNMENT 0 YS2-18m13.p1k chr12 62 405 485696 485695 F 344 0.00 1447 reject_low 8 ALIGNMENT 0 YS2-18m14.p1k chr12 520 503 455399 455398 C 18 0.00 520 reject_low 2 ALIGNMENT 36 YS2-18m14.q1k vc_5 544 509 1 36 C 36 100.00 547 reject_low 9 ALIGNMENT 0 YS2-18m14.q1k vc_7 62 509 13525 13524 F 448 0.00 547 reject_low 8 ALIGNMENT 0 YS2-18m14.q1k vc_1 505 62 2514 2513 C 444 0.00 547 reject_low 3 ALIGNMENT 0 YS2-18m14.q1k vc_2 505 62 2147 2146 C 444 0.00 547 reject_low 4 ALIGNMENT 42 YS2-18m14.q1k vc_1 547 506 2472 2513 C 42 100.00 547 reject_low 3 ALIGNMENT 0 YS2-18m14.q1k vc_5 508 62 37 36 C 447 0.00 547 reject_low 9 ALIGNMENT 42 YS2-18m14.q1k vc_3 547 506 2472 2513 C 42 100.00 547 reject_low 5 ALIGNMENT 0 YS2-18m14.q1k vc_4 62 505 5830 5829 F 444 0.00 547 reject_low 6 ALIGNMENT 448 YS2-18m14.p1k chr12 502 35 455398 455864 C 468 99.36 520 reject_low 2 ALIGNMENT 38 YS2-18m14.q1k vc_7 510 547 13525 13562 F 38 100.00 547 reject_low 8 ALIGNMENT 0 YS2-18m14.q1k vc_5 508 62 5064 5063 C 447 0.00 547 reject_low 7 ALIGNMENT 39 YS2-18m14.q1k vc_5 547 509 5025 5063 C 39 100.00 547 reject_low 7 ALIGNMENT 42 YS2-18m14.q1k vc_2 547 506 2105 2146 C 42 100.00 547 reject_low 4 ALIGNMENT 457 YS2-18m14.q1k chr12 39 506 455398 455864 F 468 99.79 547 accept 0 ALIGNMENT 0 YS2-18m14.q1k vc_3 505 62 2514 2513 C 444 0.00 547 reject_low 5 ALIGNMENT 448 YS2-18m14.p1k chr12 502 35 464535 465001 C 468 99.36 520 accept 0 ALIGNMENT 0 YS2-18m14.q1k chr12 507 547 465001 465000 F 41 0.00 547 reject_low 1 ALIGNMENT 0 YS2-18m14.q1k chr12 507 547 455864 455863 F 41 0.00 547 accept 0 ALIGNMENT 42 YS2-18m14.q1k vc_4 506 547 5830 5871 F 42 100.00 547 reject_low 6 ALIGNMENT 0 YS2-18m14.p1k chr12 520 503 464536 464535 C 18 0.00 520 accept 0 ALIGNMENT 457 YS2-18m14.q1k chr12 39 506 464535 465001 F 468 99.79 547 reject_low 1 ALIGNMENT 201 YS2-18m15.p1k vc_7 746 1069 100 438 F 324 89.51 1371 reject_low 7 ALIGNMENT 20 YS2-18m15.p1k vc_3 727 746 2512 2531 F 20 100.00 1371 reject_low 14 ALIGNMENT 20 YS2-18m15.p1k vc_7 746 727 2727 2746 C 20 100.00 1371 reject_low 16 ALIGNMENT 631 YS2-18m15.q1k chr11 36 739 357599 358302 F 704 98.30 740 accept_chi 0 ALIGNMENT 0 YS2-18m15.p1k vc_1 745 62 2106 2105 C 684 0.00 1371 reject_low 2 ALIGNMENT 0 YS2-18m15.p1k vc_7 62 745 13562 13561 F 684 0.00 1371 reject_low 8 ALIGNMENT 21 YS2-18m15.p1k vc_5 726 746 2378 2398 F 21 100.00 1371 reject_low 11 ALIGNMENT 28 YS2-18m15.p1k vc_3 779 746 2438 2472 C 34 94.12 1371 reject_low 10 ALIGNMENT 0 YS2-18m15.p1k vc_1 745 62 2473 2472 C 684 0.00 1371 reject_low 9 ALIGNMENT 0 YS2-18m15.p1k vc_4 62 745 5871 5870 F 684 0.00 1371 reject_low 5 ALIGNMENT 201 YS2-18m15.p1k vc_3 1069 746 1767 2105 C 324 89.51 1371 reject_low 4 ALIGNMENT 0 YS2-18m15.p1k vc_3 745 62 2473 2472 C 684 0.00 1371 reject_low 10 ALIGNMENT 201 YS2-18m15.p1k vc_4 746 1069 5871 6209 F 324 89.51 1371 reject_low 5 ALIGNMENT 20 YS2-18m15.p1k vc_1 727 746 2512 2531 F 20 100.00 1371 reject_low 12 ALIGNMENT 201 YS2-18m15.p1k vc_7 746 1069 13562 13900 F 324 89.51 1371 reject_low 8 ALIGNMENT 201 YS2-18m15.p1k vc_2 1069 746 1767 2105 C 324 89.51 1371 reject_low 3 ALIGNMENT 0 YS2-18m15.p1k vc_2 745 62 2106 2105 C 684 0.00 1371 reject_low 3 ALIGNMENT 0 YS2-18m15.p1k vc_3 745 62 2106 2105 C 684 0.00 1371 reject_low 4 ALIGNMENT 630 YS2-18m15.p1k chr11 732 29 357599 358302 C 704 98.30 1371 accept_chi 1 ALIGNMENT 201 YS2-18m15.p1k vc_1 1069 746 1767 2105 C 324 89.51 1371 reject_low 2 ALIGNMENT 20 YS2-18m15.p1k vc_4 746 727 5812 5831 C 20 100.00 1371 reject_low 15 ALIGNMENT 0 YS2-18m15.p1k vc_2 62 726 2145 2144 F 665 0.00 1371 reject_low 13 ALIGNMENT 0 YS2-18m15.p1k vc_1 62 726 2512 2511 F 665 0.00 1371 reject_low 12 ALIGNMENT 0 YS2-18m15.p1k vc_4 726 62 5832 5831 C 665 0.00 1371 reject_low 15 ALIGNMENT 0 YS2-18m15.p1k vc_3 62 726 2512 2511 F 665 0.00 1371 reject_low 14 ALIGNMENT 28 YS2-18m15.p1k vc_1 779 746 2438 2472 C 34 94.12 1371 reject_low 9 ALIGNMENT 0 YS2-18m15.p1k vc_5 745 62 5026 5025 C 684 0.00 1371 reject_low 6 ALIGNMENT 20 YS2-18m15.p1k vc_2 727 746 2145 2164 F 20 100.00 1371 reject_low 13 ALIGNMENT 0 YS2-18m15.p1k vc_7 726 62 2747 2746 C 665 0.00 1371 reject_low 16 ALIGNMENT 0 YS2-18m15.p1k vc_7 62 745 100 99 F 684 0.00 1371 reject_low 7 ALIGNMENT 201 YS2-18m15.p1k vc_5 1069 746 4687 5025 C 324 89.51 1371 reject_low 6 ALIGNMENT 0 YS2-18m15.p1k vc_5 62 725 2378 2377 F 664 0.00 1371 reject_low 11 ALIGNMENT 947 YS2-18m18.q1k chr16 39 1123 391895 392988 F 1085 95.94 1251 accept 0 ALIGNMENT 980 YS2-18m18.p1k chr16 1134 36 396675 397786 C 1099 96.82 1478 accept 0 ALIGNMENT 979 YS2-18m19.p1k chr15 1170 30 258119 259271 C 1141 96.23 1395 accept 0 ALIGNMENT 1008 YS2-18m19.q1k chr15 31 1232 254913 256119 F 1202 94.93 1258 accept 0 ALIGNMENT 964 YS2-18m20.q1k chr15 1193 33 602353 603518 C 1161 95.95 1306 accept_trans 0 ALIGNMENT 977 YS2-18m20.p1k chr15 33 1137 592098 593214 F 1105 96.83 1399 accept_trans 0 ALIGNMENT 0 YS2-18m22.q1k vc_3 645 62 2513 2512 C 584 0.00 686 reject_low 3 ALIGNMENT 36 YS2-18m22.q1k vc_5 683 648 1 36 C 36 100.00 686 reject_low 7 ALIGNMENT 41 YS2-18m22.q1k vc_4 646 686 5831 5871 F 41 100.00 686 reject_low 4 ALIGNMENT 41 YS2-18m22.q1k vc_3 686 646 2472 2512 C 41 100.00 686 reject_low 3 ALIGNMENT 0 YS2-18m22.q1k vc_7 62 648 13525 13524 F 587 0.00 686 reject_low 6 ALIGNMENT 0 YS2-18m22.q1k vc_1 645 62 2513 2512 C 584 0.00 686 reject_low 2 ALIGNMENT 0 YS2-18m22.q1k vc_5 647 62 5064 5063 C 586 0.00 686 reject_low 5 ALIGNMENT 574 YS2-18m22.p1k chr11 29 637 145828 146435 F 609 98.85 656 accept_chi 1 ALIGNMENT 38 YS2-18m22.q1k vc_7 649 686 13525 13562 F 38 100.00 686 reject_low 6 ALIGNMENT 582 YS2-18m22.q1k chr11 645 37 145828 146435 C 609 99.18 686 accept_chi 0 ALIGNMENT 0 YS2-18m22.q1k chr11 686 646 145829 145828 C 41 0.00 686 accept_chi 0 ALIGNMENT 0 YS2-18m22.q1k vc_5 647 62 37 36 C 586 0.00 686 reject_low 7 ALIGNMENT 41 YS2-18m22.q1k vc_1 686 646 2472 2512 C 41 100.00 686 reject_low 2 ALIGNMENT 39 YS2-18m22.q1k vc_5 686 648 5025 5063 C 39 100.00 686 reject_low 5 ALIGNMENT 0 YS2-18m22.q1k vc_4 62 645 5831 5830 F 584 0.00 686 reject_low 4 ALIGNMENT 0 YS2-18m22.p1k chr11 638 656 146435 146434 F 19 0.00 656 accept_chi 1 ALIGNMENT 945 YS2-18m23.q1k chr10 1150 30 302414 303551 C 1121 95.45 1213 accept 0 ALIGNMENT 1010 YS2-18m23.p1k chr10 32 1212 297795 298982 F 1181 96.10 1366 accept 0 ALIGNMENT 977 YS2-18m24.q1k chr12 1189 38 165637 166794 C 1152 95.40 1283 accept 0 ALIGNMENT 988 YS2-18m24.p1k chr12 30 1146 165441 166569 F 1117 97.22 1375 accept 0 ALIGNMENT 859 YS2-18n01.p1k chr11 1056 62 456608 457616 C 995 96.98 1350 accept 0 ALIGNMENT 981 YS2-18n01.q1k chr11 34 1148 455663 456794 F 1115 97.04 1226 accept 0 ALIGNMENT 41 YS2-18n02.q1k vc_2 282 242 2105 2145 C 41 100.00 282 reject_low 3 ALIGNMENT 0 YS2-18n02.p1k chr12 239 257 743364 743363 F 19 0.00 257 accept_chi 0 ALIGNMENT 0 YS2-18n02.q1k vc_1 241 62 2513 2512 C 180 0.00 282 reject_low 2 ALIGNMENT 0 YS2-18n02.q1k vc_3 241 62 2513 2512 C 180 0.00 282 reject_low 4 ALIGNMENT 0 YS2-18n02.q1k vc_4 62 241 5831 5830 F 180 0.00 282 reject_low 5 ALIGNMENT 41 YS2-18n02.q1k vc_3 282 242 2472 2512 C 41 100.00 282 reject_low 4 ALIGNMENT 0 YS2-18n02.q1k vc_2 241 62 2146 2145 C 180 0.00 282 reject_low 3 ALIGNMENT 41 YS2-18n02.q1k vc_4 242 282 5831 5871 F 41 100.00 282 reject_low 5 ALIGNMENT 200 YS2-18n02.p1k chr12 34 238 743160 743364 F 205 100.00 257 accept_chi 0 ALIGNMENT 38 YS2-18n02.q1k vc_7 245 282 13525 13562 F 38 100.00 282 reject_low 7 ALIGNMENT 0 YS2-18n02.q1k vc_5 243 62 5064 5063 C 182 0.00 282 reject_low 6 ALIGNMENT 0 YS2-18n02.q1k vc_7 62 244 13525 13524 F 183 0.00 282 reject_low 7 ALIGNMENT 200 YS2-18n02.q1k chr12 241 37 743160 743364 C 205 100.00 282 accept_chi 1 ALIGNMENT 39 YS2-18n02.q1k vc_5 282 244 5025 5063 C 39 100.00 282 reject_low 6 ALIGNMENT 41 YS2-18n02.q1k vc_1 282 242 2472 2512 C 41 100.00 282 reject_low 2 ALIGNMENT 0 YS2-18n02.q1k vc_5 243 62 37 36 C 182 0.00 282 reject_low 8 ALIGNMENT 36 YS2-18n02.q1k vc_5 279 244 1 36 C 36 100.00 282 reject_low 8 ALIGNMENT 0 YS2-18n02.q1k chr12 282 242 743161 743160 C 41 0.00 282 accept_chi 1 ALIGNMENT 328 YS2-18n03.q1k chr11 174 1010 21917 22760 F 837 81.12 1359 accept 0 ALIGNMENT 667 YS2-18n03.p1k chr11 1194 34 26082 27260 C 1161 87.08 1454 accept 0 ALIGNMENT 0 YS2-18n04.p1k chrm 675 652 34330 44045 C 24 0.00 1486 reject_low 1 ALIGNMENT 21 YS2-18n04.q1k chrm 733 706 11534 11561 C 28 96.43 1332 reject_low 2 ALIGNMENT 0 YS2-18n04.q1k chrm 805 734 11535 11534 C 72 0.00 1332 reject_low 2 ALIGNMENT 0 YS2-18n04.p1k chrm 764 731 34923 34922 C 34 0.00 1486 reject_low 5 ALIGNMENT 332 YS2-18n04.p1k chrm 651 56 44046 44686 C 596 91.44 1486 reject_low 1 ALIGNMENT 36 YS2-18n04.p1k chrm 685 755 9498 9568 F 71 85.92 1486 reject_low 2 ALIGNMENT 0 YS2-18n04.p1k chrm 669 77 46363 46362 C 593 0.00 1486 reject_low 4 ALIGNMENT 35 YS2-18n04.q1k chr07 894 982 404856 404937 F 89 88.76 1332 reject_low 3 ALIGNMENT 0 YS2-18n04.p1k chrm 764 723 46312 46311 C 42 0.00 1486 reject_low 4 ALIGNMENT 39 YS2-18n04.p1k chrm 722 670 46311 46362 C 53 92.45 1486 reject_low 4 ALIGNMENT 0 YS2-18n04.q1k chrm 705 62 11562 11561 C 644 0.00 1332 reject_low 2 ALIGNMENT 0 YS2-18n04.p1k chrm 764 725 34282 34281 C 40 0.00 1486 reject_low 1 ALIGNMENT 36 YS2-18n04.p1k chrm 724 676 34281 34329 C 49 91.84 1486 reject_low 1 ALIGNMENT 482 YS2-18n04.p1k chrm 1011 130 43694 44612 C 882 91.84 1486 accept 0 ALIGNMENT 726 YS2-18n04.q1k chrm 32 1014 41969 42938 F 983 97.97 1332 accept 0 ALIGNMENT 0 YS2-18n04.p1k chrm 129 77 44613 44612 C 53 0.00 1486 accept 0 ALIGNMENT 0 YS2-18n04.p1k chrm 688 77 34965 34964 C 612 0.00 1486 reject_low 5 ALIGNMENT 32 YS2-18n04.p1k chrm 730 689 34922 34964 C 42 92.86 1486 reject_low 5 ALIGNMENT 0 YS2-18n04.q1k chr07 62 893 404856 404855 F 832 0.00 1332 reject_low 3 ALIGNMENT 0 YS2-18n04.p1k chrm 77 684 9498 9497 F 608 0.00 1486 reject_low 2 ALIGNMENT 937 YS2-18n05.q1k chr08 30 1181 18165 19331 F 1152 94.88 1329 accept 0 ALIGNMENT 968 YS2-18n05.p1k chr08 1142 32 22412 23540 C 1111 97.66 1412 accept 0 ALIGNMENT 906 YS2-18n07.p1k chr15 1053 28 52609 53647 C 1026 97.76 1384 accept 0 ALIGNMENT 705 YS2-18n07.q1k chr15 35 953 49302 50228 F 919 93.80 1286 accept 0 ALIGNMENT 941 YS2-18n08.p1k chr16 1188 34 600104 601271 C 1155 94.98 1535 accept 0 ALIGNMENT 646 YS2-18n08.q1k chr16 25 791 597442 598213 F 767 95.57 1229 accept 0 ALIGNMENT 153 YS2-18n09.q1k chr11 191 36 511650 511805 C 156 100.00 231 accept 0 ALIGNMENT 0 YS2-18n09.q1k vc_1 190 62 2513 2512 C 129 0.00 231 reject_low 1 ALIGNMENT 41 YS2-18n09.q1k vc_1 231 191 2472 2512 C 41 100.00 231 reject_low 1 ALIGNMENT 0 YS2-18n09.q1k vc_5 192 62 5064 5063 C 131 0.00 231 reject_low 4 ALIGNMENT 36 YS2-18n09.q1k vc_5 228 193 1 36 C 36 100.00 231 reject_low 6 ALIGNMENT 41 YS2-18n09.q1k vc_4 191 231 5831 5871 F 41 100.00 231 reject_low 3 ALIGNMENT 41 YS2-18n09.q1k vc_3 231 191 2472 2512 C 41 100.00 231 reject_low 2 ALIGNMENT 0 YS2-18n09.q1k vc_3 190 62 2513 2512 C 129 0.00 231 reject_low 2 ALIGNMENT 0 YS2-18n09.q1k vc_5 192 62 37 36 C 131 0.00 231 reject_low 6 ALIGNMENT 39 YS2-18n09.q1k vc_5 231 193 5025 5063 C 39 100.00 231 reject_low 4 ALIGNMENT 38 YS2-18n09.q1k vc_7 194 231 13525 13562 F 38 100.00 231 reject_low 5 ALIGNMENT 0 YS2-18n09.q1k vc_7 62 193 13525 13524 F 132 0.00 231 reject_low 5 ALIGNMENT 0 YS2-18n09.q1k vc_4 62 190 5831 5830 F 129 0.00 231 reject_low 3 ALIGNMENT 0 YS2-18n09.q1k chr11 231 192 511651 511650 C 40 0.00 231 accept 0 ALIGNMENT 51 YS2-18n10.q1k vc_7 54 3 6360 6411 C 52 100.00 833|1,0 reject_low 7 ALIGNMENT 302 YS2-18n10.q1k vc_1 1 303 2689 2991 F 303 100.00 833 reject_low 4 ALIGNMENT 249 YS2-18n10.q1k vc_4 308 746 1879 2311 F 439 87.24 833 reject_low 3 ALIGNMENT 559 YS2-18n10.q1k vc_7 746 1 1830 2569 C 746 92.49 833 reject_vc 1 ALIGNMENT 0 YS2-18n10.q1k vc_4 237 62 113 112 C 176 0.00 833 reject_low 8 ALIGNMENT 0 YS2-18n10.q1k vc_4 305 307 1615 1878 F 3 0.00 833 reject_low 3 ALIGNMENT 247 YS2-18n10.q1k vc_7 303 53 4922 5172 C 251 99.60 833|0,1 reject_low 7 ALIGNMENT 0 YS2-18n10.q1k vc_4 62 237 1548 1547 F 176 0.00 833 reject_low 3 ALIGNMENT 560 YS2-18n10.q1k vc_5 1 746 2556 3295 F 746 92.63 833 reject_vc 0 ALIGNMENT 410 YS2-18n10.q1k vc_4 421 1 5232 5654 C 421 99.29 833 reject_low 2 ALIGNMENT 112 YS2-18n10.q1k vc_7 421 305 4583 4699 C 117 99.15 833 reject_low 7 ALIGNMENT 65 YS2-18n10.q1k vc_4 238 304 1548 1614 F 67 100.00 833 reject_low 3 ALIGNMENT 0 YS2-18n10.q1k vc_7 304 304 4700 4921 C 1 0.00 833 reject_low 7 ALIGNMENT 0 YS2-18n10.q1k vc_4 237 62 6340 6339 C 176 0.00 833 reject_low 9 ALIGNMENT 302 YS2-18n10.q1k vc_3 1 303 2689 2991 F 303 100.00 833 reject_low 6 ALIGNMENT 65 YS2-18n10.q1k vc_4 304 238 46 112 C 67 100.00 833 reject_low 8 ALIGNMENT 65 YS2-18n10.q1k vc_4 304 238 6273 6339 C 67 100.00 833 reject_low 9 ALIGNMENT 302 YS2-18n10.q1k vc_2 1 303 2322 2624 F 303 100.00 833 reject_low 5 ALIGNMENT 0 YS2-18n10.q1k vc_7 53 54 5172 6360 C 0 0.00 833 reject_low 7 ALIGNMENT 1044 YS2-18n12.q1k chr02 1221 39 227990 229174 C 1183 97.89 1221 accept 0 ALIGNMENT 1028 YS2-18n12.p1k chr02 29 1194 227436 228610 F 1166 97.77 1460 accept 0 ALIGNMENT 926 YS2-18n13.p1k chr02 1077 31 358694 359754 C 1047 97.61 1390 accept 0 ALIGNMENT 974 YS2-18n13.q1k chr02 38 1113 357730 358817 F 1076 98.14 1226 accept 0 ALIGNMENT 1000 YS2-18n14.p1k chr07 1175 31 292387 293542 C 1145 97.03 1460 accept 0 ALIGNMENT 993 YS2-18n14.q1k chr07 30 1263 290906 292163 F 1234 94.57 1263 accept 0 ALIGNMENT 0 YS2-18n15.q1k chrm 868 243 64495 64494 C 626 0.00 1262 reject_low 6 ALIGNMENT 0 YS2-18n15.q1k chrm 868 304 34858 34857 C 565 0.00 1262 reject_low 2 ALIGNMENT 0 YS2-18n15.q1k chrm 868 264 8989 8988 C 605 0.00 1262 reject_low 4 ALIGNMENT 39 YS2-18n15.q1k chrm 219 162 10394 10451 C 58 91.38 1262 reject_low 9 ALIGNMENT 0 YS2-18n15.q1k chrm 248 868 47543 47542 F 621 0.00 1262 reject_low 8 ALIGNMENT 0 YS2-18n15.q1k chrm 152 62 64585 64584 C 91 0.00 1262 reject_low 6 ALIGNMENT 0 YS2-18n15.q1k chrm 173 62 50157 50156 C 112 0.00 1262 reject_low 11 ALIGNMENT 44 YS2-18n15.q1k chrm 660 514 29349 29495 C 147 89.12 1262 accept 0 reject_low 1 ALIGNMENT 0 YS2-18n15.q1k chrm 868 220 10395 10394 C 649 0.00 1262 reject_low 9 ALIGNMENT 0 YS2-18n15.q1k chrm 62 176 47474 47473 F 115 0.00 1262 reject_low 8 ALIGNMENT 0 YS2-18n15.q1k chrm 136 62 11130 11129 C 75 0.00 1262 reject_low 5 ALIGNMENT 0 YS2-18n15.q1k chrm 153 62 34353 34352 C 92 0.00 1262 reject_low 1 ALIGNMENT 0 YS2-18n15.q1k chrm 868 224 10743 10742 C 645 0.00 1262 reject_low 7 ALIGNMENT 0 YS2-18n15.q1k chrm 222 868 12312 12311 F 647 0.00 1262 reject_low 10 ALIGNMENT 39 YS2-18n15.q1k chrm 303 174 34857 34980 C 130 82.31 1262 reject_low 2 ALIGNMENT 0 YS2-18n15.q1k chrm 513 507 29496 29551 C 7 0.00 1262 accept 0 ALIGNMENT 0 YS2-18n15.q1k chrm 62 173 12265 12264 F 112 0.00 1262 reject_low 10 ALIGNMENT 41 YS2-18n15.q1k chrm 115 236 71157 71271 F 122 82.79 1262 reject_low 3 ALIGNMENT 0 YS2-18n15.q1k chrm 159 62 10807 10806 C 98 0.00 1262 reject_low 7 ALIGNMENT 44 YS2-18n15.q1k chrm 263 176 8988 9075 C 88 85.23 1262 reject_low 4 ALIGNMENT 0 YS2-18n15.q1k chrm 868 661 29350 29349 C 208 0.00 1262 accept 0 reject_low 1 ALIGNMENT 0 YS2-18n15.q1k chrm 513 243 29496 34264 C 271 0.00 1262 reject_low 1 ALIGNMENT 42 YS2-18n15.q1k chrm 221 174 50109 50156 C 48 97.92 1262 reject_low 11 ALIGNMENT 49 YS2-18n15.q1k chrm 242 154 34265 34352 C 89 87.64 1262 reject_low 1 ALIGNMENT 45 YS2-18n15.q1k chrm 174 221 12265 12312 F 48 100.00 1262 reject_low 10 ALIGNMENT 0 YS2-18n15.q1k chrm 868 247 11022 11021 C 622 0.00 1262 reject_low 5 ALIGNMENT 0 YS2-18n15.q1k chrm 868 224 43094 43093 C 645 0.00 1262 reject_low 12 ALIGNMENT 43 YS2-18n15.q1k chrm 246 137 11021 11129 C 110 82.73 1262 reject_low 5 ALIGNMENT 51 YS2-18n15.q1k chrm 223 160 10742 10806 C 64 93.75 1262 reject_low 7 ALIGNMENT 0 YS2-18n15.q1k chrm 868 222 50110 50109 C 647 0.00 1262 reject_low 11 ALIGNMENT 41 YS2-18n15.q1k chrm 223 174 43093 43142 C 50 96.00 1262 reject_low 12 ALIGNMENT 0 YS2-18n15.q1k chrm 161 62 10452 10451 C 100 0.00 1262 reject_low 9 ALIGNMENT 0 YS2-18n15.q1k chrm 173 62 34981 34980 C 112 0.00 1262 reject_low 2 ALIGNMENT 45 YS2-18n15.q1k chrm 177 247 47474 47543 F 71 90.14 1262 reject_low 8 ALIGNMENT 0 YS2-18n15.q1k chrm 62 114 71157 71156 F 53 0.00 1262 reject_low 3 ALIGNMENT 0 YS2-18n15.q1k chrm 175 62 9076 9075 C 114 0.00 1262 reject_low 4 ALIGNMENT 0 YS2-18n15.q1k chrm 237 868 71271 71270 F 632 0.00 1262 reject_low 3 ALIGNMENT 0 YS2-18n15.q1k chrm 173 62 43143 43142 C 112 0.00 1262 reject_low 12 ALIGNMENT 339 YS2-18n15.q1k chrm 506 34 29552 30025 C 473 98.94 1262 accept 0 ALIGNMENT 48 YS2-18n15.q1k chrm 242 153 64494 64584 C 90 86.67 1262 reject_low 6 ALIGNMENT 0 YS2-18n16.p1k chr04 62 895 1518473 1518472 F 834 0.00 1465 reject_low 1 ALIGNMENT 0 YS2-18n16.q1k chr04 62 820 1519281 1519280 F 759 0.00 1209 reject_low 2 ALIGNMENT 775 YS2-18n16.p1k chr04 31 904 1517554 1518426 F 874 97.83 1465|0,4 accept 0 ALIGNMENT 0 YS2-18n16.q1k chr04 621 62 1519509 1519508 C 560 0.00 1209 reject_low 1 ALIGNMENT 27 YS2-18n16.q1k chr04 821 849 1519281 1519309 F 29 100.00 1209 reject_low 2 ALIGNMENT 0 YS2-18n16.p1k chr04 901 900 1518423 1518477 F 0 0.00 1465 accept 0 ALIGNMENT 951 YS2-18n16.q1k chr04 1187 33 1518931 1520098 C 1155 95.50 1209 accept 0 ALIGNMENT 350 YS2-18n16.q1k chr04 1041 622 1519088 1519508 C 420 96.19 1209 reject_low 1 ALIGNMENT 0 YS2-18n16.q1k chr04 850 867 1519309 1519308 F 18 0.00 1209 reject_low 2 ALIGNMENT 93 YS2-18n16.p1k chr04 896 1036 1518473 1518620 F 141 92.91 1465|5,0 accept 0 reject_low 1 ALIGNMENT 1016 YS2-18n17.q1k chr03 29 1206 107871 109052 F 1178 95.93 1272 accept 0 ALIGNMENT 844 YS2-18n17.p1k chr03 991 37 111027 111993 C 955 97.80 1316 accept 0 ALIGNMENT 873 YS2-18n18.p1k chr13 989 32 32192 33165 C 958 98.33 1331 accept 0 ALIGNMENT 960 YS2-18n18.q1k chr13 38 1224 27589 28796 F 1187 94.95 1266 accept 0 ALIGNMENT 827 YS2-18n20.q1k chr12 38 949 466910 467812 F 912 98.14 1293 reject_bad_break 2 ALIGNMENT 827 YS2-18n20.q1k chr12 38 949 457773 458675 F 912 98.14 1293 reject_bad_break 1 ALIGNMENT 58 YS2-18n20.q1k chr12 1017 1182 458715 458898 F 166 84.34 1293 reject_bad_break 1 ALIGNMENT 0 YS2-18n20.q1k chr12 950 1016 458676 458714 F 67 0.00 1293 reject_bad_break 1 ALIGNMENT 928 YS2-18n20.p1k chr05 26 1065 41537 42589 F 1040 97.40 1379 accept_chi 0 ALIGNMENT 0 YS2-18n20.q1k chr12 950 1016 467813 467851 F 67 0.00 1293 reject_bad_break 2 ALIGNMENT 58 YS2-18n20.q1k chr12 1017 1182 467852 468035 F 166 84.34 1293 reject_bad_break 2 ALIGNMENT 976 YS2-18n21.q1k chr09 1165 29 285455 286584 C 1137 95.60 1197 accept 0 ALIGNMENT 911 YS2-18n21.p1k chr09 31 1103 281239 282325 F 1073 95.81 1347 accept 0 ALIGNMENT 141 YS2-18n22.p1k vc_4 971 1227 5871 6142 F 257 86.77 1461 reject_low 5 ALIGNMENT 797 YS2-18n22.q1k chr16 25 891 547340 548205 F 867 98.15 1223 accept_chi 1 ALIGNMENT 141 YS2-18n22.p1k vc_7 971 1227 100 371 F 257 86.77 1461 reject_low 7 ALIGNMENT 0 YS2-18n22.p1k vc_7 167 970 100 99 F 804 0.00 1461 reject_low 7 ALIGNMENT 0 YS2-18n22.p1k vc_7 167 970 13562 13561 F 804 0.00 1461 reject_low 8 ALIGNMENT 0 YS2-18n22.p1k vc_5 970 167 5026 5025 C 804 0.00 1461 reject_low 6 ALIGNMENT 141 YS2-18n22.p1k vc_3 1227 971 1834 2105 C 257 86.77 1461 reject_low 4 ALIGNMENT 0 YS2-18n22.p1k vc_2 970 167 2106 2105 C 804 0.00 1461 reject_low 3 ALIGNMENT 0 YS2-18n22.p1k vc_3 970 167 2106 2105 C 804 0.00 1461 reject_low 4 ALIGNMENT 141 YS2-18n22.p1k vc_7 971 1227 13562 13833 F 257 86.77 1461 reject_low 8 ALIGNMENT 0 YS2-18n22.p1k vc_1 970 167 2473 2472 C 804 0.00 1461 reject_low 9 ALIGNMENT 0 YS2-18n22.p1k vc_1 970 167 2106 2105 C 804 0.00 1461 reject_low 2 ALIGNMENT 0 YS2-18n22.p1k vc_3 970 167 2473 2472 C 804 0.00 1461 reject_low 10 ALIGNMENT 802 YS2-18n22.p1k chr16 952 36 547340 548254 C 917 96.73 1461 accept_chi 0 ALIGNMENT 141 YS2-18n22.p1k vc_2 1227 971 1834 2105 C 257 86.77 1461 reject_low 3 ALIGNMENT 141 YS2-18n22.p1k vc_1 1227 971 1834 2105 C 257 86.77 1461 reject_low 2 ALIGNMENT 141 YS2-18n22.p1k vc_5 1227 971 4754 5025 C 257 86.77 1461 reject_low 6 ALIGNMENT 26 YS2-18n22.p1k vc_3 1001 971 2441 2472 C 31 96.77 1461 reject_low 10 ALIGNMENT 26 YS2-18n22.p1k vc_1 1001 971 2441 2472 C 31 96.77 1461 reject_low 9 ALIGNMENT 0 YS2-18n22.p1k vc_4 167 970 5871 5870 F 804 0.00 1461 reject_low 5 ALIGNMENT 995 YS2-18n23.q1k chr12 38 1221 399105 400298 F 1184 95.02 1272 accept 0 ALIGNMENT 924 YS2-18n23.p1k chr12 1062 31 402741 403782 C 1032 97.19 1319 accept 0 ALIGNMENT 94 YS2-18n24.p1k chr06 111 218 31622 31729 F 108 98.15 1389 reject_low 2 ALIGNMENT 763 YS2-18n24.p1k chr12 1179 36 467523 468627 C 1144 92.22 1389 accept 1 ALIGNMENT 944 YS2-18n24.q1k chr12 40 1162 463349 464486 F 1123 94.75 1226 accept 1 ALIGNMENT 944 YS2-18n24.q1k chr12 40 1162 454212 455349 F 1123 94.75 1226 accept 0 ALIGNMENT 0 YS2-18n24.p1k chr06 62 110 31622 31621 F 49 0.00 1389 reject_low 2 ALIGNMENT 0 YS2-18n24.p1k chr06 219 845 31729 31728 F 627 0.00 1389 reject_low 2 ALIGNMENT 763 YS2-18n24.p1k chr12 1179 36 458386 459490 C 1144 92.22 1389 accept 0 ALIGNMENT 1057 YS2-18o01.p1k chr07 1207 34 797784 798968 C 1174 97.53 1401 accept_chi 0 ALIGNMENT 500 YS2-18o01.q1k chr16 914 87 870850 871667 C 828 88.89 1286 accept_chi 1 ALIGNMENT 325 YS2-18o02.p1k chr15 38 380 962210 962551 F 343 99.13 398 accept 0 ALIGNMENT 0 YS2-18o02.p1k chr15 381 398 962551 962550 F 18 0.00 398 accept 0 ALIGNMENT 0 YS2-18o04.q1k chr03 729 830 290193 290192 F 102 0.00 1280 reject_low 30 ALIGNMENT 459 YS2-18o04.q1k chr11 1111 93 1618 2646 C 1019 83.02 1280 reject_low 24 ALIGNMENT 872 YS2-18o04.p1k chr07 1068 33 1084647 1085693 C 1036 96.04 1341 reject_low 11 ALIGNMENT 0 YS2-18o04.q1k chr01 547 62 177032 177031 C 486 0.00 1280 reject_low 29 ALIGNMENT 801 YS2-18o04.p1k chr06 33 1068 3362 4388 F 1036 94.40 1341 reject_low 14 ALIGNMENT 602 YS2-18o04.q1k chr10 1117 93 8575 9603 C 1025 87.41 1280 reject_low 7 ALIGNMENT 872 YS2-18o04.p1k chr16 33 1068 5184 6230 F 1036 96.04 1341 ambiguous_tel 1 ALIGNMENT 822 YS2-18o04.p1k chr08 958 33 557371 558305 C 926 97.30 1341 reject_low 16 ALIGNMENT 0 YS2-18o04.q1k chr09 62 92 433461 433460 F 31 0.00 1280 reject_low 26 ALIGNMENT 53 YS2-18o04.p1k chr08 1068 988 557282 557367 C 81 91.36 1341 reject_low 16 ALIGNMENT 540 YS2-18o04.q1k chr15 1111 179 11363 12294 C 933 87.46 1280 reject_low 22 ALIGNMENT 347 YS2-18o04.q1k chr02 513 1014 809006 809503 F 502 90.64 1280 reject_low 27 ALIGNMENT 56 YS2-18o04.p1k chr05 988 1068 6140 6225 F 81 92.59 1341 reject_low 20 ALIGNMENT 0 YS2-18o04.q1k chr14 62 92 781452 781451 F 31 0.00 1280 reject_low 19 ALIGNMENT 0 YS2-18o04.q1k chr03 62 530 289999 289998 F 469 0.00 1280 reject_low 30 ALIGNMENT 872 YS2-18o04.p1k chr14 33 1068 5275 6321 F 1036 96.04 1341 reject_low 13 ALIGNMENT 946 YS2-18o04.p1k chr12 33 1068 4325 5365 F 1036 98.17 1341 reject_low 2 ALIGNMENT 545 YS2-18o04.q1k chr08 954 155 11890 12696 C 800 90.25 1280 reject_low 10 ALIGNMENT 0 YS2-18o04.q1k chr03 62 112 307349 307348 F 51 0.00 1280 reject_low 25 ALIGNMENT 0 YS2-18o04.q1k chr05 62 520 63695 63694 F 459 0.00 1280 reject_low 28 ALIGNMENT 325 YS2-18o04.q1k chr05 521 920 63695 64090 F 400 94.50 1280 reject_low 28 ALIGNMENT 0 YS2-18o04.q1k chr12 174 62 13833 13832 C 113 0.00 1280 reject_low 2,3 ALIGNMENT 53 YS2-18o04.p1k chr12 1068 988 1065441 1065526 C 81 91.36 1341 reject_low 18 ALIGNMENT 0 YS2-18o04.p1k chr05 959 987 6137 6139 F 29 0.00 1341 reject_low 20 ALIGNMENT 624 YS2-18o04.q1k chr15 32 975 1082306 1083258 F 944 89.51 1280 ambiguous_tel 0 ALIGNMENT 939 YS2-18o04.p1k chr12 1068 33 1071947 1072988 C 1036 97.97 1341 reject_low 4 ALIGNMENT 580 YS2-18o04.q1k chr12 190 1117 1062547 1063469 F 928 88.69 1280 reject_low 4 ALIGNMENT 50 YS2-18o04.q1k chr03 531 728 289999 290193 F 198 76.77 1280 reject_low 30 ALIGNMENT 0 YS2-18o04.q1k chr04 62 523 1523198 1523197 F 462 0.00 1280 reject_low 9 ALIGNMENT 203 YS2-18o04.q1k chr01 920 548 176653 177031 C 373 85.25 1280 reject_low 29 ALIGNMENT 516 YS2-18o04.q1k chr07 1014 118 6197 7090 C 897 87.18 1280 reject_low 23 ALIGNMENT 946 YS2-18o04.p1k chr13 33 1068 4201 5241 F 1036 98.17 1341 reject_low 12 ALIGNMENT 604 YS2-18o04.q1k chr02 1117 115 7412 8414 C 1003 88.14 1280 reject_low 8 ALIGNMENT 875 YS2-18o04.p1k chr10 33 1068 5647 6693 F 1036 96.14 1341 reject_low 7 ALIGNMENT 0 YS2-18o04.q1k chr01 113 62 2611 2610 C 52 0.00 1280 reject_low 21 ALIGNMENT 588 YS2-18o04.q1k chr12 1117 175 12890 13832 C 943 88.76 1280 reject_low 2,3 ALIGNMENT 296 YS2-18o04.q1k chr09 93 768 433461 434144 F 676 82.40 1280 reject_low 26 ALIGNMENT 0 YS2-18o04.q1k chr10 92 62 9604 9603 C 31 0.00 1280 reject_low 7 ALIGNMENT 946 YS2-18o04.p1k chr12 33 1068 9860 10900 F 1036 98.17 1341 reject_low 3 ALIGNMENT 939 YS2-18o04.p1k chr15 1068 33 1084911 1085952 C 1036 97.97 1341 ambiguous_tel 0 ALIGNMENT 0 YS2-18o04.p1k chr08 987 959 557368 557370 C 29 0.00 1341 reject_low 16 ALIGNMENT 0 YS2-18o04.q1k chr02 62 512 809006 809005 F 451 0.00 1280 reject_low 27 ALIGNMENT 0 YS2-18o04.q1k chr02 114 62 8415 8414 C 53 0.00 1280 reject_low 8 ALIGNMENT 0 YS2-18o04.q1k chr07 117 62 7091 7090 C 56 0.00 1280 reject_low 23 ALIGNMENT 53 YS2-18o04.p1k chr02 988 1068 5465 5550 F 81 91.36 1341 reject_low 8 ALIGNMENT 825 YS2-18o04.p1k chr08 33 927 4057 4951 F 895 98.32 1341 reject_low 10 ALIGNMENT 588 YS2-18o04.q1k chr13 35 908 922117 922998 F 874 89.70 1280 reject_low 17 ALIGNMENT 558 YS2-18o04.q1k chr01 1115 114 1610 2610 C 1002 86.53 1280 reject_low 21 ALIGNMENT 875 YS2-18o04.p1k chr09 33 1068 5664 6710 F 1036 96.14 1341 reject_low 6 ALIGNMENT 827 YS2-18o04.p1k chr02 33 958 4526 5461 F 926 97.41 1341 reject_low 8 ALIGNMENT 0 YS2-18o04.q1k chr07 62 512 1080267 1080266 F 451 0.00 1280 reject_low 11 ALIGNMENT 0 YS2-18o04.q1k chr08 154 62 12697 12696 C 93 0.00 1280 reject_low 10 ALIGNMENT 372 YS2-18o04.q1k chr03 113 1031 307349 308275 F 919 81.72 1280 reject_low 25 ALIGNMENT 0 YS2-18o04.q1k chr15 178 62 12295 12294 C 117 0.00 1280 reject_low 22 ALIGNMENT 0 YS2-18o04.p1k chr12 987 959 1065527 1065529 C 29 0.00 1341 reject_low 18 ALIGNMENT 890 YS2-18o04.p1k chr16 1124 33 942740 943852 C 1092 95.33 1341 reject_low 5 ALIGNMENT 0 YS2-18o04.p1k chr02 959 987 5462 5464 F 29 0.00 1341 reject_low 8 ALIGNMENT 348 YS2-18o04.q1k chr07 513 920 1080267 1080674 F 408 95.34 1280 reject_low 11 ALIGNMENT 422 YS2-18o04.q1k chr04 524 1117 1523198 1523796 F 594 91.41 1280 reject_low 9 ALIGNMENT 0 YS2-18o04.q1k chr09 92 62 9621 9620 C 31 0.00 1280 reject_low 6 ALIGNMENT 639 YS2-18o04.p1k chr05 33 958 5247 6136 F 926 92.44 1341 reject_low 20 ALIGNMENT 0 YS2-18o04.q1k chr12 62 189 1062547 1062546 F 128 0.00 1280 reject_low 4 ALIGNMENT 0 YS2-18o04.q1k chr09 769 830 434144 434143 F 62 0.00 1280 reject_low 26 ALIGNMENT 939 YS2-18o04.p1k chr04 1068 33 1525746 1526787 C 1036 97.97 1341 reject_low 9 ALIGNMENT 602 YS2-18o04.q1k chr09 1117 93 8592 9620 C 1025 87.41 1280 reject_low 6 ALIGNMENT 706 YS2-18o04.p1k chr12 958 33 1065530 1066436 C 926 94.17 1341 reject_low 18 ALIGNMENT 622 YS2-18o04.q1k chr16 987 32 7873 8835 C 956 89.33 1280 ambiguous_tel 1 ALIGNMENT 0 YS2-18o04.q1k chr11 92 62 2647 2646 C 31 0.00 1280 reject_low 24 ALIGNMENT 612 YS2-18o04.q1k chr14 93 1117 781452 782473 F 1025 88.00 1280 reject_low 19 ALIGNMENT 714 YS2-18o04.p1k chr05 1068 33 570611 571616 C 1036 92.47 1341 reject_low 15 ALIGNMENT 232 YS2-18o05.q1k chr16 39 296 921798 922057 F 258 96.90 336 ambiguous_tel 1 ALIGNMENT 0 YS2-18o05.q1k vc_7 62 298 13525 13524 F 237 0.00 336 reject_low 7 ALIGNMENT 42 YS2-18o05.q1k vc_1 336 295 2472 2513 C 42 100.00 336 reject_low 2 ALIGNMENT 0 YS2-18o05.q1k vc_3 294 62 2514 2513 C 233 0.00 336 reject_low 4 ALIGNMENT 42 YS2-18o05.q1k vc_3 336 295 2472 2513 C 42 100.00 336 reject_low 4 ALIGNMENT 38 YS2-18o05.q1k vc_7 299 336 13525 13562 F 38 100.00 336 reject_low 7 ALIGNMENT 0 YS2-18o05.q1k vc_1 294 62 2514 2513 C 233 0.00 336 reject_low 2 ALIGNMENT 42 YS2-18o05.q1k vc_4 295 336 5830 5871 F 42 100.00 336 reject_low 5 ALIGNMENT 0 YS2-18o05.q1k chr16 297 336 922057 922056 F 40 0.00 336 ambiguous_tel 1 ALIGNMENT 253 YS2-18o05.p1k chr16 292 33 921798 922057 C 260 98.85 310 ambiguous_tel 0 ALIGNMENT 0 YS2-18o05.q1k vc_5 297 62 37 36 C 236 0.00 336 reject_low 8 ALIGNMENT 39 YS2-18o05.q1k vc_5 336 298 5025 5063 C 39 100.00 336 reject_low 6 ALIGNMENT 0 YS2-18o05.q1k vc_4 62 294 5830 5829 F 233 0.00 336 reject_low 5 ALIGNMENT 42 YS2-18o05.q1k vc_2 336 295 2105 2146 C 42 100.00 336 reject_low 3 ALIGNMENT 0 YS2-18o05.p1k chr16 310 293 921799 921798 C 18 0.00 310 ambiguous_tel 0 ALIGNMENT 0 YS2-18o05.q1k vc_2 294 62 2147 2146 C 233 0.00 336 reject_low 3 ALIGNMENT 0 YS2-18o05.q1k vc_5 297 62 5064 5063 C 236 0.00 336 reject_low 6 ALIGNMENT 36 YS2-18o05.q1k vc_5 333 298 1 36 C 36 100.00 336 reject_low 8 ALIGNMENT 976 YS2-18o06.p1k chr04 31 1117 1128300 1129399 F 1087 97.61 1387 accept 0 ALIGNMENT 1045 YS2-18o06.q1k chr04 1277 31 1131939 1133196 C 1247 95.35 1330 accept 0 ALIGNMENT 36 YS2-18o07.q1k vc_5 308 273 1 36 C 36 100.00 311 reject_low 7 ALIGNMENT 38 YS2-18o07.q1k vc_7 274 311 13525 13562 F 38 100.00 311 reject_low 6 ALIGNMENT 0 YS2-18o07.q1k vc_3 270 62 2513 2512 C 209 0.00 311 reject_low 3 ALIGNMENT 0 YS2-18o07.q1k vc_5 272 62 5064 5063 C 211 0.00 311 reject_low 5 ALIGNMENT 0 YS2-18o07.q1k chr04 271 311 103589 103588 F 41 0.00 311 accept_chi 0 ALIGNMENT 41 YS2-18o07.q1k vc_3 311 271 2472 2512 C 41 100.00 311 reject_low 3 ALIGNMENT 0 YS2-18o07.q1k vc_5 272 62 37 36 C 211 0.00 311 reject_low 7 ALIGNMENT 0 YS2-18o07.p1k chr04 290 272 103351 103350 C 19 0.00 290 accept_chi 1 ALIGNMENT 41 YS2-18o07.q1k vc_1 311 271 2472 2512 C 41 100.00 311 reject_low 2 ALIGNMENT 0 YS2-18o07.q1k vc_7 62 273 13525 13524 F 212 0.00 311 reject_low 6 ALIGNMENT 0 YS2-18o07.q1k vc_1 270 62 2513 2512 C 209 0.00 311 reject_low 2 ALIGNMENT 39 YS2-18o07.q1k vc_5 311 273 5025 5063 C 39 100.00 311 reject_low 5 ALIGNMENT 206 YS2-18o07.q1k chr04 32 270 103350 103589 F 239 97.07 311 accept_chi 0 ALIGNMENT 0 YS2-18o07.q1k vc_4 62 270 5831 5830 F 209 0.00 311 reject_low 4 ALIGNMENT 205 YS2-18o07.p1k chr04 271 32 103350 103589 C 240 96.67 290 accept_chi 1 ALIGNMENT 41 YS2-18o07.q1k vc_4 271 311 5831 5871 F 41 100.00 311 reject_low 4 ALIGNMENT 952 YS2-18o08.p1k chr05 32 1042 280713 281733 F 1011 98.71 1390 accept 0 ALIGNMENT 0 YS2-18o08.q1k chr02 914 62 353660 353659 C 853 0.00 1265 reject_low 1 ALIGNMENT 32 YS2-18o08.q1k chr02 958 915 353616 353659 C 44 95.45 1265 reject_low 1 ALIGNMENT 1008 YS2-18o08.q1k chr05 1253 37 284082 285324 C 1217 94.91 1265 accept 0 ALIGNMENT 959 YS2-18o10.p1k chr07 37 1118 167715 168814 F 1082 97.41 1395 accept 0 ALIGNMENT 936 YS2-18o10.q1k chr07 1132 40 171582 172685 C 1093 95.97 1227 accept 0 ALIGNMENT 0 YS2-18o11.q1k vc_1 476 93 2513 2512 C 384 0.00 517 reject_low 4 ALIGNMENT 0 YS2-18o11.q1k vc_5 478 93 5064 5063 C 386 0.00 517 reject_low 8 ALIGNMENT 41 YS2-18o11.q1k vc_2 517 477 2105 2145 C 41 100.00 517 reject_low 5 ALIGNMENT 0 YS2-18o11.q1k vc_7 93 479 13525 13524 F 387 0.00 517 reject_low 9 ALIGNMENT 0 YS2-18o11.q1k vc_5 478 93 37 36 C 386 0.00 517 reject_low 10 ALIGNMENT 412 YS2-18o11.q1k chr07 34 477 226053 226495 F 444 98.42 517 accept 0 ALIGNMENT 41 YS2-18o11.q1k vc_3 517 477 2472 2512 C 41 100.00 517 reject_low 6 ALIGNMENT 38 YS2-18o11.q1k vc_7 480 517 13525 13562 F 38 100.00 517 reject_low 9 ALIGNMENT 105 YS2-18o11.p1k vc_7 1 235 13918 14165 F 235 83.83 534 reject_vc 3 ALIGNMENT 41 YS2-18o11.q1k vc_4 477 517 5831 5871 F 41 100.00 517 reject_low 7 ALIGNMENT 0 YS2-18o11.q1k vc_3 476 93 2513 2512 C 384 0.00 517 reject_low 6 ALIGNMENT 0 YS2-18o11.q1k vc_4 93 476 5831 5830 F 384 0.00 517 reject_low 7 ALIGNMENT 39 YS2-18o11.q1k vc_5 517 479 5025 5063 C 39 100.00 517 reject_low 8 ALIGNMENT 105 YS2-18o11.p1k vc_5 235 1 4422 4669 C 235 83.40 534 reject_vc 1 ALIGNMENT 0 YS2-18o11.q1k vc_2 476 93 2146 2145 C 384 0.00 517 reject_low 5 ALIGNMENT 105 YS2-18o11.p1k vc_7 1 235 456 703 F 235 83.83 534 reject_vc 2 ALIGNMENT 41 YS2-18o11.q1k vc_1 517 477 2472 2512 C 41 100.00 517 reject_low 4 ALIGNMENT 0 YS2-18o11.q1k chr07 478 517 226495 226494 F 40 0.00 517 accept 0 ALIGNMENT 36 YS2-18o11.q1k vc_5 514 479 1 36 C 36 100.00 517 reject_low 10 ALIGNMENT 926 YS2-18o12.p1k chr02 1170 34 154687 155832 C 1137 94.99 1477 accept 0 ALIGNMENT 955 YS2-18o12.q1k chr02 32 1116 151253 152355 F 1085 97.14 1241 accept 0 ALIGNMENT 1000 YS2-18o13.q1k chr14 49 1229 406977 408170 F 1181 95.51 1246 accept 0 ALIGNMENT 26 YS2-18o13.q1k chr09 798 701 413310 413407 C 98 75.51 1246 reject_low 1 ALIGNMENT 223 YS2-18o13.q1k chr09 636 50 413472 414058 C 587 79.73 1246 reject_low 1 ALIGNMENT 1001 YS2-18o13.p1k chr14 1228 35 407806 409011 C 1194 95.06 1386 accept 0 ALIGNMENT 0 YS2-18o13.q1k chr09 838 799 413311 413310 C 40 0.00 1246 reject_low 1 ALIGNMENT 0 YS2-18o13.q1k chr09 700 637 413408 413471 C 64 0.00 1246 reject_low 1 ALIGNMENT 399 YS2-18o14.p1k chr12 102 850 538470 539216 F 749 85.31 1496 accept 0 ALIGNMENT 1004 YS2-18o16.q1k chr12 1248 40 540322 541547 C 1209 95.20 1293 accept 0 ALIGNMENT 879 YS2-18o16.p1k chr12 33 1032 538405 539418 F 1000 96.70 1379 accept 0 ALIGNMENT 1034 YS2-18o17.q1k chr14 39 1162 684505 685642 F 1124 98.04 1218 accept 0 ALIGNMENT 955 YS2-18o17.p1k chr14 1085 32 686252 687313 C 1054 97.44 1397 accept 0 ALIGNMENT 870 YS2-18o18.p1k chr08 1042 37 31604 32621 C 1006 96.42 1373 accept 0 ALIGNMENT 1009 YS2-18o18.q1k chr08 36 1216 27351 28545 F 1181 96.61 1264 accept 0 ALIGNMENT 0 YS2-18o19.q1k chr02 129 128 363862 363838 F 0 0.00 1221 reject_bad_break 0 ALIGNMENT 70 YS2-18o19.q1k chr02 53 128 363785 363861 F 76 98.68 1221 reject_bad_break 0 ALIGNMENT 899 YS2-18o19.q1k chr02 129 1201 363839 364901 F 1073 95.99 1221 reject_bad_break 0 ALIGNMENT 0 YS2-18o19.q1k chrm 134 77 62038 62037 C 58 0.00 1221 reject_low 1 ALIGNMENT 0 YS2-18o19.q1k chrm 898 297 61877 61876 C 602 0.00 1221 reject_low 1 ALIGNMENT 74 YS2-18o19.q1k chrm 296 135 61876 62037 C 162 83.33 1221 reject_low 1 ALIGNMENT 886 YS2-18o19.p1k chr02 1080 35 367802 368860 C 1046 96.27 1365 reject_bad_break 0 ALIGNMENT 1007 YS2-18o20.p1k chr08 1236 34 99430 100632 C 1203 95.43 1499 accept 0 ALIGNMENT 1012 YS2-18o20.q1k chr08 28 1203 95871 97045 F 1176 96.09 1204 accept 0 ALIGNMENT 0 YS2-18o21.q1k chr15 519 62 572037 572036 C 458 0.00 1255 reject_low 11 ALIGNMENT 0 YS2-18o21.q1k chr07 600 784 544653 544652 F 185 0.00 1255 reject_low 3 ALIGNMENT 0 YS2-18o21.q1k chr07 519 62 531693 531692 C 458 0.00 1255 reject_low 14 ALIGNMENT 0 YS2-18o21.q1k chr07 62 519 544574 544573 F 458 0.00 1255 reject_low 3 ALIGNMENT 0 YS2-18o21.q1k chr10 519 62 204731 204730 C 458 0.00 1255 reject_low 8 ALIGNMENT 0 YS2-18o21.q1k chr10 519 62 355451 355450 C 458 0.00 1255 reject_low 4 ALIGNMENT 0 YS2-18o21.q1k chr13 519 62 463632 463631 C 458 0.00 1255 reject_low 10 ALIGNMENT 0 YS2-18o21.q1k chr09 602 784 324375 324374 F 183 0.00 1255 reject_low 1 ALIGNMENT 0 YS2-18o21.q1k chr02 784 600 405954 405953 C 185 0.00 1255 reject_low 2 ALIGNMENT 0 YS2-18o21.q1k chr14 589 588 519162 525066 F 0 0.00 1255 accept_trans 0 ALIGNMENT 78 YS2-18o21.q1k chr10 598 520 204652 204730 C 79 100.00 1255 reject_low 8 ALIGNMENT 75 YS2-18o21.q1k chr04 599 520 568960 569039 C 80 98.75 1255 reject_low 13 ALIGNMENT 0 YS2-18o21.q1k chr07 784 600 531614 531613 C 185 0.00 1255 reject_low 14 ALIGNMENT 78 YS2-18o21.q1k chr07 520 599 544574 544653 F 80 100.00 1255 reject_low 3 ALIGNMENT 78 YS2-18o21.q1k chr09 520 598 336339 336417 F 79 100.00 1255 reject_low 7 ALIGNMENT 0 YS2-18o21.q1k chr09 62 519 324294 324293 F 458 0.00 1255 reject_low 1 ALIGNMENT 0 YS2-18o21.q1k chr10 784 600 355372 355371 C 185 0.00 1255 reject_low 4 ALIGNMENT 0 YS2-18o21.q1k chr09 62 519 336339 336338 F 458 0.00 1255 reject_low 7 ALIGNMENT 0 YS2-18o21.q1k chr15 784 599 571959 571958 C 186 0.00 1255 reject_low 11 ALIGNMENT 75 YS2-18o21.q1k chr07 599 520 531613 531692 C 80 98.75 1255 reject_low 14 ALIGNMENT 78 YS2-18o21.q1k chr10 520 599 374333 374412 F 80 100.00 1255 reject_low 5 ALIGNMENT 415 YS2-18o21.q1k chr14 586 1114 525064 525592 F 529 94.14 1255|3,0 accept_trans 0 ALIGNMENT 78 YS2-18o21.q1k chr15 598 520 571958 572036 C 79 100.00 1255 reject_low 11 ALIGNMENT 78 YS2-18o21.q1k chr02 599 520 405953 406032 C 80 100.00 1255 reject_low 2 ALIGNMENT 78 YS2-18o21.q1k chr10 598 520 541422 541500 C 79 100.00 1255 reject_low 9 ALIGNMENT 0 YS2-18o21.q1k chr10 784 599 541423 541422 C 186 0.00 1255 reject_low 9 ALIGNMENT 75 YS2-18o21.q1k chr12 598 520 427133 427211 C 79 98.73 1255 reject_low 15 ALIGNMENT 0 YS2-18o21.q1k chr13 784 599 463554 463553 C 186 0.00 1255 reject_low 10 ALIGNMENT 0 YS2-18o21.q1k chr12 784 599 427134 427133 C 186 0.00 1255 reject_low 15 ALIGNMENT 936 YS2-18o21.p1k chr14 1154 33 528092 529226 C 1122 95.81 1353 accept_trans 0 ALIGNMENT 0 YS2-18o21.q1k chr10 519 62 541501 541500 C 458 0.00 1255 reject_low 9 ALIGNMENT 0 YS2-18o21.q1k chr12 519 62 427212 427211 C 458 0.00 1255 reject_low 15 ALIGNMENT 80 YS2-18o21.q1k chr09 520 601 324294 324375 F 82 100.00 1255 reject_low 1 ALIGNMENT 0 YS2-18o21.q1k chr10 600 784 374412 374411 F 185 0.00 1255 reject_low 5 ALIGNMENT 78 YS2-18o21.q1k chr13 598 520 463553 463631 C 79 100.00 1255 reject_low 10 ALIGNMENT 522 YS2-18o21.q1k chr14 40 590 518609 519163 F 551 98.73 1255|0,2 accept_trans 0 ALIGNMENT 77 YS2-18o21.q1k chr12 598 521 793918 793995 C 78 100.00 1255 reject_low 12 ALIGNMENT 0 YS2-18o21.q1k chr02 519 62 406033 406032 C 458 0.00 1255 reject_low 2 ALIGNMENT 0 YS2-18o21.q1k chr04 784 600 568961 568960 C 185 0.00 1255 reject_low 13 ALIGNMENT 0 YS2-18o21.q1k chr12 520 62 793996 793995 C 459 0.00 1255 reject_low 12 ALIGNMENT 0 YS2-18o21.q1k chr11 62 519 512967 512966 F 458 0.00 1255 reject_low 6 ALIGNMENT 0 YS2-18o21.q1k chr10 784 599 204653 204652 C 186 0.00 1255 reject_low 8 ALIGNMENT 0 YS2-18o21.q1k chr04 519 62 569040 569039 C 458 0.00 1255 reject_low 13 ALIGNMENT 0 YS2-18o21.q1k chr12 784 599 793919 793918 C 186 0.00 1255 reject_low 12 ALIGNMENT 78 YS2-18o21.q1k chr11 520 599 512967 513046 F 80 100.00 1255 reject_low 6 ALIGNMENT 0 YS2-18o21.q1k chr09 599 784 336417 336416 F 186 0.00 1255 reject_low 7 ALIGNMENT 0 YS2-18o21.q1k chr11 600 784 513046 513045 F 185 0.00 1255 reject_low 6 ALIGNMENT 0 YS2-18o21.q1k chr10 62 519 374333 374332 F 458 0.00 1255 reject_low 5 ALIGNMENT 78 YS2-18o21.q1k chr10 599 520 355371 355450 C 80 100.00 1255 reject_low 4 ALIGNMENT 917 YS2-18o22.q1k chr05 1183 39 423421 424585 C 1145 94.50 1272 accept 0 ALIGNMENT 271 YS2-18o22.q1k chr07 317 676 148235 148594 F 360 92.22 1272 reject_low 1 ALIGNMENT 831 YS2-18o22.p1k chr05 37 993 419382 420343 F 957 96.55 1326 accept 0 ALIGNMENT 0 YS2-18o22.q1k chr07 677 888 148594 148593 F 212 0.00 1272 reject_low 1 ALIGNMENT 0 YS2-18o22.q1k chr07 62 316 148235 148234 F 255 0.00 1272 reject_low 1 ALIGNMENT 0 YS2-18o23.q1k chr11 929 552 313273 313272 C 378 0.00 1151 reject_low 9 ALIGNMENT 33 YS2-18o23.q1k chr14 576 437 102192 102328 C 140 77.14 1151 reject_low 1 ALIGNMENT 0 YS2-18o23.q1k chr04 313 62 987418 987417 C 252 0.00 1151 reject_low 11 ALIGNMENT 0 YS2-18o23.q1k chr14 436 62 102329 102328 C 375 0.00 1151 reject_low 1 ALIGNMENT 0 YS2-18o23.q1k chr05 436 396 449117 449174 C 41 0.00 1151 reject_low 10 ALIGNMENT 970 YS2-18o23.p1k chr07 1169 37 797065 798200 C 1133 96.20 1358 accept 0 ALIGNMENT 0 YS2-18o23.q1k chr11 414 409 313405 313423 C 6 0.00 1151 reject_low 9 ALIGNMENT 0 YS2-18o23.q1k chr16 577 929 560809 560808 F 353 0.00 1151 reject_low 3 ALIGNMENT 0 YS2-18o23.q1k chr07 908 929 793895 793894 F 22 0.00 1151 accept 0 ALIGNMENT 27 YS2-18o23.q1k chr16 576 479 810225 810318 C 98 79.59 1151 reject_low 7 ALIGNMENT 30 YS2-18o23.q1k chr11 408 321 313424 313511 C 88 80.68 1151 reject_low 9 ALIGNMENT 0 YS2-18o23.q1k chr13 929 562 372712 372711 C 368 0.00 1151 reject_low 5 ALIGNMENT 33 YS2-18o23.q1k chr16 437 576 56652 56788 F 140 77.14 1151 reject_low 2 ALIGNMENT 821 YS2-18o23.q1k chr07 41 907 793028 793895 F 867 98.96 1151 accept 0 ALIGNMENT 0 YS2-18o23.q1k chr07 552 929 536076 536075 F 378 0.00 1151 reject_low 6 ALIGNMENT 0 YS2-18o23.q1k chr16 62 436 560673 560672 F 375 0.00 1151 reject_low 3 ALIGNMENT 0 YS2-18o23.q1k chr16 929 577 810226 810225 C 353 0.00 1151 reject_low 7 ALIGNMENT 0 YS2-18o23.q1k chr04 478 396 987238 987335 C 83 0.00 1151 reject_low 11 ALIGNMENT 0 YS2-18o23.q1k chr16 478 62 810319 810318 C 417 0.00 1151 reject_low 7 ALIGNMENT 30 YS2-18o23.q1k chr16 437 576 560673 560809 F 140 76.43 1151 reject_low 3 ALIGNMENT 0 YS2-18o23.q1k chr05 929 577 448981 448980 C 353 0.00 1151 reject_low 10 ALIGNMENT 20 YS2-18o23.q1k chr05 395 314 449175 449256 C 82 76.83 1151 reject_low 10 ALIGNMENT 25 YS2-18o23.q1k chr04 561 479 987159 987237 C 83 80.72 1151 reject_low 11 ALIGNMENT 30 YS2-18o23.q1k chr07 437 551 535965 536076 F 115 78.26 1151 reject_low 6 ALIGNMENT 0 YS2-18o23.q1k chr13 436 62 372833 372832 C 375 0.00 1151 reject_low 5 ALIGNMENT 0 YS2-18o23.q1k chr04 929 562 987160 987159 C 368 0.00 1151 reject_low 11 ALIGNMENT 33 YS2-18o23.q1k chr05 576 437 448980 449116 C 140 77.14 1151 reject_low 10 ALIGNMENT 0 YS2-18o23.q1k chr12 440 62 818206 818205 C 379 0.00 1151 reject_low 8 ALIGNMENT 40 YS2-18o23.q1k chr11 551 415 313272 313404 C 137 79.56 1151 reject_low 9 ALIGNMENT 23 YS2-18o23.q1k chr12 576 441 818073 818205 C 136 75.00 1151 reject_low 8 ALIGNMENT 0 YS2-18o23.q1k chr14 929 577 102193 102192 C 353 0.00 1151 reject_low 1 ALIGNMENT 0 YS2-18o23.q1k chr16 62 436 56652 56651 F 375 0.00 1151 reject_low 2 ALIGNMENT 0 YS2-18o23.q1k chr11 320 62 313512 313511 C 259 0.00 1151 reject_low 9 ALIGNMENT 20 YS2-18o23.q1k chr04 395 314 987336 987417 C 82 76.83 1151 reject_low 11 ALIGNMENT 0 YS2-18o23.q1k chr05 313 62 449257 449256 C 252 0.00 1151 reject_low 10 ALIGNMENT 31 YS2-18o23.q1k chr13 561 437 372711 372832 C 125 77.60 1151 reject_low 5 ALIGNMENT 0 YS2-18o23.q1k chr13 62 436 184365 184364 F 375 0.00 1151 reject_low 4 ALIGNMENT 0 YS2-18o23.q1k chr12 929 577 818074 818073 C 353 0.00 1151 reject_low 8 ALIGNMENT 0 YS2-18o23.q1k chr07 62 436 535965 535964 F 375 0.00 1151 reject_low 6 ALIGNMENT 31 YS2-18o23.q1k chr13 437 561 184365 184486 F 125 77.60 1151 reject_low 4 ALIGNMENT 0 YS2-18o23.q1k chr16 577 929 56788 56787 F 353 0.00 1151 reject_low 2 ALIGNMENT 0 YS2-18o23.q1k chr13 562 929 184486 184485 F 368 0.00 1151 reject_low 4 ALIGNMENT 987 YS2-18o24.q1k chr16 37 1129 296324 297416 F 1093 97.53 1167 accept 0 ALIGNMENT 888 YS2-18o24.p1k chr16 1161 57 296325 297416 C 1105 94.75 1458 accept 0 ALIGNMENT 974 YS2-18p01.p1k chr16 32 1162 307928 309080 F 1131 97.08 1381 accept 0 ALIGNMENT 105 YS2-18p02.p1k chr16 710 1061 7873 8218 F 352 78.98 1433 reject_low 18 ALIGNMENT 0 YS2-18p02.p1k chr01 62 644 1681 1680 F 583 0.00 1433 reject_low 9 ALIGNMENT 0 YS2-18p02.p1k chr06 62 746 99200 99199 F 685 0.00 1433 reject_low 17 ALIGNMENT 0 YS2-18p02.p1k chr08 62 652 11819 11818 F 591 0.00 1433 reject_low 7 ALIGNMENT 128 YS2-18p02.p1k chr01 748 981 176631 176860 F 234 86.32 1433 reject_low 16 ALIGNMENT 173 YS2-18p02.p1k chr04 1089 645 1523285 1523723 C 445 82.25 1433 reject_low 10 ALIGNMENT 20 YS2-18p02.p1k chr02 689 717 809463 809491 F 29 100.00 1433 reject_low 20 ALIGNMENT 170 YS2-18p02.p1k chr12 1089 695 1062969 1063354 C 395 83.29 1433 reject_low 15 ALIGNMENT 0 YS2-18p02.p1k chr14 241 765 9876 9875 F 525 0.00 1433 reject_low 2 ALIGNMENT 759 YS2-18p02.p1k chr07 1089 36 1080365 1081395 C 1054 92.69 1433 reject_low 1 ALIGNMENT 0 YS2-18p02.p1k chr01 62 747 176631 176630 F 686 0.00 1433 reject_low 16 ALIGNMENT 173 YS2-18p02.p1k chr14 36 240 9670 9876 F 205 96.10 1433 reject_low 2 ALIGNMENT 0 YS2-18p02.p1k chr16 62 709 7873 7872 F 648 0.00 1433 reject_low 18 ALIGNMENT 179 YS2-18p02.p1k chr07 714 1089 6232 6599 F 376 84.31 1433 reject_low 14 ALIGNMENT 0 YS2-18p02.p1k chr15 62 695 11472 11471 F 634 0.00 1433 reject_low 13 ALIGNMENT 182 YS2-18p02.p1k chr14 1089 645 781971 782400 C 445 83.15 1433 reject_low 8 ALIGNMENT 197 YS2-18p02.p1k chr02 706 1190 7539 8014 F 485 82.27 1433 reject_low 4 ALIGNMENT 0 YS2-18p02.p1k chr07 62 713 6232 6231 F 652 0.00 1433 reject_low 14 ALIGNMENT 182 YS2-18p02.p1k chr12 645 1190 12963 13491 F 546 80.95 1433 reject_low 5 ALIGNMENT 0 YS2-18p02.p1k chr04 644 62 1523724 1523723 C 583 0.00 1433 reject_low 10 ALIGNMENT 0 YS2-18p02.p1k chr05 767 62 64095 64094 C 706 0.00 1433 reject_low 6 ALIGNMENT 172 YS2-18p02.p1k chr09 645 1089 8664 9102 F 445 82.02 1433 reject_low 11 ALIGNMENT 172 YS2-18p02.p1k chr10 645 1089 8647 9085 F 445 82.02 1433 reject_low 12 ALIGNMENT 174 YS2-18p02.p1k chr01 645 1089 1681 2116 F 445 82.25 1433 reject_low 9 ALIGNMENT 0 YS2-18p02.p1k chr02 62 705 7539 7538 F 644 0.00 1433 reject_low 4 ALIGNMENT 0 YS2-18p02.p1k chr12 694 62 1063355 1063354 C 633 0.00 1433 reject_low 15 ALIGNMENT 0 YS2-18p02.p1k chr12 62 644 12963 12962 F 583 0.00 1433 reject_low 5 ALIGNMENT 170 YS2-18p02.p1k chr06 36 240 7760 7966 F 205 95.61 1433 reject_low 3 ALIGNMENT 106 YS2-18p02.p1k chr13 1061 741 922728 923042 C 321 80.06 1433 reject_low 19 ALIGNMENT 0 YS2-18p02.p1k chr09 62 644 8664 8663 F 583 0.00 1433 reject_low 11 ALIGNMENT 195 YS2-18p02.p1k chr08 653 1089 11819 12230 F 437 85.13 1433 reject_low 7 ALIGNMENT 0 YS2-18p02.p1k chr06 241 765 7966 7965 F 525 0.00 1433 reject_low 3 ALIGNMENT 0 YS2-18p02.p1k chr10 62 644 8647 8646 F 583 0.00 1433 reject_low 12 ALIGNMENT 183 YS2-18p02.p1k chr15 696 1089 11472 11857 F 394 84.01 1433 reject_low 13 ALIGNMENT 864 YS2-18p02.p1k chr02 1089 36 809104 810139 C 1054 95.73 1433 accept_tel 0 ALIGNMENT 0 YS2-18p02.p1k chr13 740 62 923043 923042 C 679 0.00 1433 reject_low 19 ALIGNMENT 0 YS2-18p02.p1k chr02 718 765 809491 809490 F 48 0.00 1433 reject_low 20 ALIGNMENT 115 YS2-18p02.p1k chr06 747 958 99200 99411 F 212 84.91 1433 reject_low 17 ALIGNMENT 0 YS2-18p02.p1k chr14 644 62 782401 782400 C 583 0.00 1433 reject_low 8 ALIGNMENT 172 YS2-18p02.p1k chr05 1161 768 63712 64094 C 394 83.25 1433 reject_low 6 ALIGNMENT 0 YS2-18p02.p1k chr02 62 688 809463 809462 F 627 0.00 1433 reject_low 20 ALIGNMENT 0 YS2-18p03.q1k scplasm1 563 62 2956 2955 C 502 0.00 1275 accept_chi 1 ALIGNMENT 345 YS2-18p03.q1k scplasm1 1198 564 2318 2955 C 635 85.51 1275 accept_chi 1 ALIGNMENT 391 YS2-18p03.p1k scplasm1 1 487 4313 4813 F 487 95.48 712 accept_chi 0 ALIGNMENT 0 YS2-18p04.p1k chr10 897 324 742762 742761 C 574 0.00 1347 reject_low 2 ALIGNMENT 0 YS2-18p04.p1k chr14 293 897 9451 9450 F 605 0.00 1347 reject_low 6 ALIGNMENT 254 YS2-18p04.p1k chr02 530 872 75850 76192 F 343 92.13 1347 accept 0 ALIGNMENT 0 YS2-18p04.p1k chr04 324 897 2955 2954 F 574 0.00 1347 reject_low 1 ALIGNMENT 155 YS2-18p04.p1k chr09 287 37 437060 437310 C 251 88.45 1347 reject_low 10 ALIGNMENT 0 YS2-18p04.p1k chr06 293 897 7541 7540 F 605 0.00 1347 reject_low 5 ALIGNMENT 0 YS2-18p04.p1k chr09 897 288 437061 437060 C 610 0.00 1347 reject_low 10 ALIGNMENT 0 YS2-18p04.p1k chr02 62 529 75850 75849 F 468 0.00 1347 accept 0 ALIGNMENT 0 YS2-18p04.p1k chr02 873 897 76192 76191 F 25 0.00 1347 accept 0 ALIGNMENT 0 YS2-18p04.p1k chr02 897 295 810357 810356 C 603 0.00 1347 reject_low 3 ALIGNMENT 208 YS2-18p04.p1k chr14 37 292 9196 9451 F 256 94.92 1347 reject_low 6 ALIGNMENT 0 YS2-18p04.p1k chr13 295 897 8361 8360 F 603 0.00 1347 reject_low 4 ALIGNMENT 0 YS2-18p04.p1k chr08 288 897 7516 7515 F 610 0.00 1347 reject_low 9 ALIGNMENT 155 YS2-18p04.p1k chr08 37 287 7266 7516 F 251 88.45 1347 reject_low 9 ALIGNMENT 214 YS2-18p04.p1k chr06 37 292 7286 7541 F 256 95.70 1347 reject_low 5 ALIGNMENT 217 YS2-18p04.p1k chr02 294 37 810356 810613 C 258 95.74 1347 reject_low 3 ALIGNMENT 202 YS2-18p04.p1k chr07 292 37 1081614 1081869 C 256 94.14 1347 reject_low 7 ALIGNMENT 0 YS2-18p04.p1k chr07 897 293 1081615 1081614 C 605 0.00 1347 reject_low 7 ALIGNMENT 0 YS2-18p04.p1k chr11 289 897 15680 15679 F 609 0.00 1347 reject_low 8 ALIGNMENT 224 YS2-18p04.p1k chr10 323 37 742761 743048 C 287 93.73 1347 reject_low 2 ALIGNMENT 224 YS2-18p04.p1k chr04 37 323 2668 2955 F 287 93.73 1347 reject_low 1 ALIGNMENT 177 YS2-18p04.p1k chr11 37 288 15429 15680 F 252 91.27 1347 reject_low 8 ALIGNMENT 217 YS2-18p04.p1k chr13 37 294 8104 8361 F 258 95.74 1347 reject_low 4 ALIGNMENT 952 YS2-18p06.q1k chr07 1123 39 438634 439734 C 1085 96.96 1300 accept 0 ALIGNMENT 950 YS2-18p06.p1k chr07 32 1084 434381 435450 F 1053 98.20 1400 accept 0 ALIGNMENT 0 YS2-18p08.q1k scplasm1 62 558 1 0 F 497 0.00 1260 reject_low 2 ALIGNMENT 972 YS2-18p08.q1k vc_6 39 1082 5491 6535 F 1044 98.47 1260 reject_low 1 ALIGNMENT 0 YS2-18p08.q1k scplasm1 559 900 6318 6317 F 342 0.00 1260 reject_low 3 ALIGNMENT 666 YS2-18p08.p1k scplasm1 32 1045 1936 2950 F 1014 89.45 1436 accept 0 ALIGNMENT 552 YS2-18p08.q1k scplasm1 559 1254 1 706 F 696 93.68 1260 reject_low 2 ALIGNMENT 220 YS2-18p08.q1k scplasm1 1254 899 3947 4312 C 356 88.76 1260 accept 0 ALIGNMENT 0 YS2-18p08.q1k scplasm1 898 62 4313 4312 C 837 0.00 1260 accept 0 ALIGNMENT 496 YS2-18p08.q1k scplasm1 39 558 5798 6318 F 520 99.81 1260 reject_low 3 ALIGNMENT 0 YS2-18p09.q1k chr07 525 865 7090 7089 F 341 0.00 1250 reject_low 9 ALIGNMENT 23 YS2-18p09.q1k chr02 611 641 8499 8529 F 31 93.55 1250 reject_low 20 ALIGNMENT 0 YS2-18p09.q1k chr03 865 530 307350 307349 C 336 0.00 1250 reject_low 10 ALIGNMENT 0 YS2-18p09.q1k chr12 865 453 1062548 1062547 C 413 0.00 1250 reject_low 11 ALIGNMENT 0 YS2-18p09.q1k chr10 550 865 9603 9602 F 316 0.00 1250 reject_low 4 ALIGNMENT 28 YS2-18p09.q1k chr12 599 649 13966 14016 F 51 88.24 1250 reject_low 18 ALIGNMENT 0 YS2-18p09.q1k chr02 528 610 8415 8498 F 83 0.00 1250 reject_low 20 ALIGNMENT 235 YS2-18p09.q1k chr10 39 549 9092 9603 F 511 83.17 1250 reject_low 4 ALIGNMENT 47 YS2-18p09.q1k chr06 35 94 99543 99603 F 60 93.33 1250 reject_low 15 ALIGNMENT 0 YS2-18p09.q1k chr14 865 550 781453 781452 C 316 0.00 1250 reject_low 8 ALIGNMENT 214 YS2-18p09.q1k chr07 39 524 6606 7090 F 486 82.72 1250 reject_low 9 ALIGNMENT 199 YS2-18p09.q1k chr12 39 524 13399 13887 F 486 81.89 1250 reject_low 18 ALIGNMENT 0 YS2-18p09.q1k chr01 529 611 2611 2682 F 83 0.00 1250 reject_low 19 ALIGNMENT 228 YS2-18p09.q1k chr09 549 35 433461 433975 C 515 82.91 1250 reject_low 5 ALIGNMENT 66 YS2-18p09.q1k chr04 118 39 1523198 1523278 C 80 95.00 1250 reject_low 13 ALIGNMENT 0 YS2-18p09.q1k chr02 642 865 8529 8528 F 224 0.00 1250 reject_low 20 ALIGNMENT 0 YS2-18p09.q1k chr15 464 865 12294 12293 F 402 0.00 1250 reject_low 12 ALIGNMENT 855 YS2-18p09.q1k chr16 35 1107 8257 9332 F 1073 93.48 1250 reject_low 1 ALIGNMENT 706 YS2-18p09.p1k chr16 1044 86 12189 13187 C 959 93.12 1354 reject_low 1 ALIGNMENT 28 YS2-18p09.p1k chr16 85 34 13179 13230 C 52 90.38 1354 reject_low 1 ALIGNMENT 64 YS2-18p09.q1k chr07 129 39 1080267 1080358 C 91 91.21 1250 reject_low 14 ALIGNMENT 0 YS2-18p09.q1k chr01 95 865 177031 177030 F 771 0.00 1250 reject_low 16 ALIGNMENT 225 YS2-18p09.q1k chr11 35 549 2132 2646 F 515 82.52 1250 reject_low 7 ALIGNMENT 0 YS2-18p09.p1k chr13 62 189 917887 917886 F 128 0.00 1354 reject_low 2 ALIGNMENT 628 YS2-18p09.p1k chr13 190 1044 917887 918775 F 855 92.98 1354 reject_low 2 ALIGNMENT 207 YS2-18p09.q1k chr12 452 39 1062547 1062962 C 414 84.30 1250 reject_low 11 ALIGNMENT 216 YS2-18p09.q1k chr14 549 39 781452 781964 C 511 82.39 1250 reject_low 8 ALIGNMENT 187 YS2-18p09.q1k chr01 39 528 2123 2610 F 490 81.02 1250 reject_low 19 ALIGNMENT 0 YS2-18p09.q1k chr04 865 119 1523199 1523198 C 747 0.00 1250 reject_low 13 ALIGNMENT 235 YS2-18p09.q1k chr09 39 549 9109 9620 F 511 83.17 1250 reject_low 3 ALIGNMENT 0 YS2-18p09.q1k chr08 488 865 12696 12695 F 378 0.00 1250 reject_low 6 ALIGNMENT 188 YS2-18p09.q1k chr02 39 527 7922 8414 F 489 80.98 1250 reject_low 20 ALIGNMENT 0 YS2-18p09.p1k chr16 85 86 13188 13178 C 0 0.00 1354 reject_low 1 ALIGNMENT 0 YS2-18p09.q1k chr11 550 865 2646 2645 F 316 0.00 1250 reject_low 7 ALIGNMENT 0 YS2-18p09.q1k chr01 646 865 2716 2715 F 220 0.00 1250 reject_low 19 ALIGNMENT 44 YS2-18p09.q1k chr01 35 94 176971 177031 F 60 91.67 1250 reject_low 16 ALIGNMENT 246 YS2-18p09.q1k chr08 39 487 12237 12696 F 449 86.19 1250 reject_low 6 ALIGNMENT 167 YS2-18p09.q1k chr15 35 463 11860 12294 F 429 81.35 1250 reject_low 12 ALIGNMENT 203 YS2-18p09.q1k chr03 529 34 307349 307848 C 496 81.85 1250 reject_low 10 ALIGNMENT 0 YS2-18p09.q1k chr12 865 95 94737 94736 C 771 0.00 1250 reject_low 17 ALIGNMENT 0 YS2-18p09.q1k chr07 865 130 1080268 1080267 C 736 0.00 1250 reject_low 14 ALIGNMENT 0 YS2-18p09.q1k chr09 865 550 433462 433461 C 316 0.00 1250 reject_low 5 ALIGNMENT 0 YS2-18p09.q1k chr06 95 865 99603 99602 F 771 0.00 1250 reject_low 15 ALIGNMENT 38 YS2-18p09.q1k chr12 94 35 94736 94796 C 60 88.33 1250 reject_low 17 ALIGNMENT 828 YS2-18p09.q1k chr13 1107 35 921617 922689 C 1073 92.82 1250 reject_low 2 ALIGNMENT 0 YS2-18p09.q1k chr12 650 865 14016 14015 F 216 0.00 1250 reject_low 18 ALIGNMENT 23 YS2-18p09.q1k chr01 612 645 2683 2716 F 34 91.18 1250 reject_low 19 ALIGNMENT 855 YS2-18p09.q1k chr15 1107 35 1081809 1082884 C 1073 93.48 1250 accept_tel 0 ALIGNMENT 737 YS2-18p09.p1k chr15 34 1044 1077905 1078952 F 1011 93.08 1354 accept_tel 0 ALIGNMENT 0 YS2-18p09.q1k chr12 525 598 13888 13965 F 74 0.00 1250 reject_low 18 ALIGNMENT 0 YS2-18p09.q1k chr09 550 865 9620 9619 F 316 0.00 1250 reject_low 3 ALIGNMENT 202 YS2-18p10.p1k chr12 35 257 464727 464948 F 223 98.65 275 reject_low 1 ALIGNMENT 202 YS2-18p10.p1k chr12 35 257 455590 455811 F 223 98.65 275 accept 0 ALIGNMENT 0 YS2-18p10.p1k chr12 258 275 464948 464947 F 18 0.00 275 reject_low 1 ALIGNMENT 41 YS2-18p10.q1k vc_3 289 249 2472 2512 C 41 100.00 289 reject_low 4 ALIGNMENT 0 YS2-18p10.q1k chr12 289 251 455591 455590 C 39 0.00 289 reject_low 2 ALIGNMENT 0 YS2-18p10.q1k vc_5 250 62 5064 5063 C 189 0.00 289 reject_low 6 ALIGNMENT 202 YS2-18p10.q1k chr12 250 28 455590 455811 C 223 98.65 289 reject_low 2 ALIGNMENT 202 YS2-18p10.q1k chr12 250 28 464727 464948 C 223 98.65 289 accept 0 ALIGNMENT 36 YS2-18p10.q1k vc_5 286 251 1 36 C 36 100.00 289 reject_low 8 ALIGNMENT 41 YS2-18p10.q1k vc_4 249 289 5831 5871 F 41 100.00 289 reject_low 5 ALIGNMENT 0 YS2-18p10.q1k vc_5 250 62 37 36 C 189 0.00 289 reject_low 8 ALIGNMENT 0 YS2-18p10.p1k chr12 258 275 455811 455810 F 18 0.00 275 accept 0 ALIGNMENT 0 YS2-18p10.q1k vc_1 248 62 2513 2512 C 187 0.00 289 reject_low 3 ALIGNMENT 0 YS2-18p10.q1k vc_7 62 251 13525 13524 F 190 0.00 289 reject_low 7 ALIGNMENT 41 YS2-18p10.q1k vc_1 289 249 2472 2512 C 41 100.00 289 reject_low 3 ALIGNMENT 39 YS2-18p10.q1k vc_5 289 251 5025 5063 C 39 100.00 289 reject_low 6 ALIGNMENT 0 YS2-18p10.q1k vc_3 248 62 2513 2512 C 187 0.00 289 reject_low 4 ALIGNMENT 38 YS2-18p10.q1k vc_7 252 289 13525 13562 F 38 100.00 289 reject_low 7 ALIGNMENT 0 YS2-18p10.q1k vc_4 62 248 5831 5830 F 187 0.00 289 reject_low 5 ALIGNMENT 0 YS2-18p10.q1k chr12 289 251 464728 464727 C 39 0.00 289 accept 0 ALIGNMENT 41 YS2-18p11.q1k vc_1 305 265 2472 2512 C 41 100.00 305 reject_low 1 ALIGNMENT 38 YS2-18p11.q1k vc_7 268 305 13525 13562 F 38 100.00 305 reject_low 5 ALIGNMENT 0 YS2-18p11.q1k vc_1 264 62 2513 2512 C 203 0.00 305 reject_low 1 ALIGNMENT 0 YS2-18p11.q1k chr16 265 305 72466 72465 F 41 0.00 305 accept 0 ALIGNMENT 0 YS2-18p11.q1k vc_5 266 62 5064 5063 C 205 0.00 305 reject_low 4 ALIGNMENT 36 YS2-18p11.q1k vc_5 302 267 1 36 C 36 100.00 305 reject_low 6 ALIGNMENT 0 YS2-18p11.q1k vc_4 62 264 5831 5830 F 203 0.00 305 reject_low 3 ALIGNMENT 0 YS2-18p11.q1k vc_3 264 62 2513 2512 C 203 0.00 305 reject_low 2 ALIGNMENT 212 YS2-18p11.q1k chr16 32 264 72232 72466 F 233 99.14 305 accept 0 ALIGNMENT 39 YS2-18p11.q1k vc_5 305 267 5025 5063 C 39 100.00 305 reject_low 4 ALIGNMENT 0 YS2-18p11.q1k vc_7 62 267 13525 13524 F 206 0.00 305 reject_low 5 ALIGNMENT 0 YS2-18p11.q1k vc_5 266 62 37 36 C 205 0.00 305 reject_low 6 ALIGNMENT 41 YS2-18p11.q1k vc_4 265 305 5831 5871 F 41 100.00 305 reject_low 3 ALIGNMENT 41 YS2-18p11.q1k vc_3 305 265 2472 2512 C 41 100.00 305 reject_low 2 ALIGNMENT 921 YS2-18p12.p1k chr04 34 1152 818112 819247 F 1119 95.71 1382 accept 0 ALIGNMENT 970 YS2-18p12.q1k chr04 1200 41 821583 822760 C 1160 96.21 1272 accept 0 ALIGNMENT 0 YS2-18p13.q1k chr04 862 820 1151088 1151087 C 43 0.00 1277 reject_low 6 ALIGNMENT 50 YS2-18p13.q1k chr07 684 821 817536 817675 F 138 82.61 1277 reject_low 10 ALIGNMENT 0 YS2-18p13.q1k chr02 683 62 221234 221233 C 622 0.00 1277 reject_low 7 ALIGNMENT 0 YS2-18p13.q1k chr06 704 62 137823 137822 C 643 0.00 1277 reject_low 15 ALIGNMENT 0 YS2-18p13.q1k chr07 683 62 328102 328101 C 622 0.00 1277 reject_low 1 ALIGNMENT 67 YS2-18p13.q1k chr13 688 872 378870 379056 F 185 81.62 1277 reject_low 2 ALIGNMENT 0 YS2-18p13.q1k chr13 62 683 357142 357141 F 622 0.00 1277 reject_low 13 ALIGNMENT 0 YS2-18p13.q1k chr02 62 757 258860 258859 F 696 0.00 1277 reject_low 19 ALIGNMENT 49 YS2-18p13.q1k chr06 821 705 137705 137822 C 117 83.76 1277 reject_low 15 ALIGNMENT 0 YS2-18p13.q1k chr07 683 62 931885 931884 C 622 0.00 1277 reject_low 18 ALIGNMENT 963 YS2-18p13.q1k chr06 1250 39 260889 262120 C 1212 94.55 1277 accept 0 ALIGNMENT 0 YS2-18p13.q1k chr07 683 62 402156 402155 C 622 0.00 1277 reject_low 17 ALIGNMENT 0 YS2-18p13.q1k chr10 62 704 354610 354609 F 643 0.00 1277 reject_low 20 ALIGNMENT 0 YS2-18p13.q1k chr11 62 683 513311 513310 F 622 0.00 1277 reject_low 3 ALIGNMENT 0 YS2-18p13.q1k chr07 683 62 535409 535408 C 622 0.00 1277 reject_low 9 ALIGNMENT 0 YS2-18p13.q1k chr07 62 683 823118 823117 F 622 0.00 1277 reject_low 11 ALIGNMENT 44 YS2-18p13.q1k chr07 821 684 402016 402155 C 138 81.16 1277 reject_low 17 ALIGNMENT 0 YS2-18p13.q1k chr13 62 687 378870 378869 F 626 0.00 1277 reject_low 2 ALIGNMENT 36 YS2-18p13.q1k chr16 771 830 436484 436543 F 60 88.33 1277 reject_low 21 ALIGNMENT 0 YS2-18p13.q1k chr11 62 683 457921 457920 F 622 0.00 1277 reject_low 12 ALIGNMENT 0 YS2-18p13.q1k chr06 862 822 137706 137705 C 41 0.00 1277 reject_low 15 ALIGNMENT 0 YS2-18p13.q1k chr07 62 683 817536 817535 F 622 0.00 1277 reject_low 10 ALIGNMENT 0 YS2-18p13.q1k chr11 822 862 458060 458059 F 41 0.00 1277 reject_low 12 ALIGNMENT 0 YS2-18p13.q1k chr02 862 822 226679 226678 C 41 0.00 1277 reject_low 8 ALIGNMENT 50 YS2-18p13.q1k chr11 684 821 457921 458060 F 138 82.61 1277 reject_low 12 ALIGNMENT 1018 YS2-18p13.p1k chr06 35 1223 256953 258149 F 1189 96.38 1491 accept 0 ALIGNMENT 50 YS2-18p13.q1k chr04 819 684 1151087 1151223 C 136 82.35 1277 reject_low 6 ALIGNMENT 0 YS2-18p13.q1k chr02 862 822 221095 221094 C 41 0.00 1277 reject_low 7 ALIGNMENT 26 YS2-18p13.q1k chr16 684 730 436384 436430 F 47 91.49 1277 reject_low 21 ALIGNMENT 0 YS2-18p13.q1k chr10 822 862 354728 354727 F 41 0.00 1277 reject_low 20 ALIGNMENT 0 YS2-18p13.q1k chr13 62 722 481392 481391 F 661 0.00 1277 reject_low 4 ALIGNMENT 0 YS2-18p13.q1k chr07 822 862 823257 823256 F 41 0.00 1277 reject_low 11 ALIGNMENT 29 YS2-18p13.q1k chr02 758 857 258860 258957 F 100 80.00 1277 reject_low 19 ALIGNMENT 0 YS2-18p13.q1k chr16 731 770 436431 436483 F 40 0.00 1277 reject_low 21 ALIGNMENT 0 YS2-18p13.q1k chr15 827 862 664276 664275 F 36 0.00 1277 reject_low 5 ALIGNMENT 0 YS2-18p13.q1k chr04 683 62 1151224 1151223 C 622 0.00 1277 reject_low 6 ALIGNMENT 50 YS2-18p13.q1k chr02 821 684 221094 221233 C 138 82.61 1277 reject_low 7 ALIGNMENT 56 YS2-18p13.q1k chr15 684 826 664133 664276 F 143 83.22 1277 reject_low 5 ALIGNMENT 0 YS2-18p13.q1k chr02 683 62 259770 259769 C 622 0.00 1277 reject_low 14 ALIGNMENT 0 YS2-18p13.q1k chr13 822 862 357281 357280 F 41 0.00 1277 reject_low 13 ALIGNMENT 0 YS2-18p13.q1k chr16 62 683 436384 436383 F 622 0.00 1277 reject_low 21 ALIGNMENT 94 YS2-18p13.q1k chr07 872 684 327911 328101 C 189 86.24 1277 reject_low 1 ALIGNMENT 0 YS2-18p13.q1k chr15 62 683 664133 664132 F 622 0.00 1277 reject_low 5 ALIGNMENT 0 YS2-18p13.q1k chr16 831 862 436543 436542 F 32 0.00 1277 reject_low 21 ALIGNMENT 0 YS2-18p13.q1k chr07 862 822 402017 402016 C 41 0.00 1277 reject_low 17 ALIGNMENT 50 YS2-18p13.q1k chr13 684 821 357142 357281 F 138 82.61 1277 reject_low 13 ALIGNMENT 60 YS2-18p13.q1k chr13 723 870 481392 481540 F 148 83.11 1277 reject_low 4 ALIGNMENT 50 YS2-18p13.q1k chr02 821 684 226678 226817 C 138 82.61 1277 reject_low 8 ALIGNMENT 0 YS2-18p13.q1k chr02 862 822 259631 259630 C 41 0.00 1277 reject_low 14 ALIGNMENT 0 YS2-18p13.q1k chr03 822 862 124408 124407 F 41 0.00 1277 reject_low 16 ALIGNMENT 39 YS2-18p13.q1k chr10 705 821 354610 354728 F 117 81.20 1277 reject_low 20 ALIGNMENT 44 YS2-18p13.q1k chr07 821 684 931745 931884 C 138 81.16 1277 reject_low 18 ALIGNMENT 0 YS2-18p13.q1k chr03 62 684 124270 124269 F 623 0.00 1277 reject_low 16 ALIGNMENT 0 YS2-18p13.q1k chr07 822 862 817675 817674 F 41 0.00 1277 reject_low 10 ALIGNMENT 70 YS2-18p13.q1k chr11 684 858 513311 513486 F 175 84.00 1277 reject_low 3 ALIGNMENT 47 YS2-18p13.q1k chr02 821 684 259630 259769 C 138 81.88 1277 reject_low 14 ALIGNMENT 47 YS2-18p13.q1k chr03 685 821 124270 124408 F 137 81.75 1277 reject_low 16 ALIGNMENT 0 YS2-18p13.q1k chr07 862 822 535270 535269 C 41 0.00 1277 reject_low 9 ALIGNMENT 0 YS2-18p13.q1k chr07 862 822 931746 931745 C 41 0.00 1277 reject_low 18 ALIGNMENT 0 YS2-18p13.q1k chr02 683 62 226818 226817 C 622 0.00 1277 reject_low 8 ALIGNMENT 50 YS2-18p13.q1k chr07 821 684 535269 535408 C 138 82.61 1277 reject_low 9 ALIGNMENT 50 YS2-18p13.q1k chr07 684 821 823118 823257 F 138 82.61 1277 reject_low 11 ALIGNMENT 119 YS2-18p14.q1k chr12 587 469 472464 472582 C 119 100.00 1277 reject_low 4 ALIGNMENT 0 YS2-18p14.q1k chr12 468 62 472583 472582 C 407 0.00 1277 reject_low 4 ALIGNMENT 0 YS2-18p14.q1k chr12 468 62 468931 468930 C 407 0.00 1277 reject_low 1 ALIGNMENT 128 YS2-18p14.q1k chr12 587 454 489348 489481 C 134 98.51 1277 reject_low 2 ALIGNMENT 0 YS2-18p14.q1k chr12 71 72 460203 460218 C 0 0.00 1277 reject_bad_break 0 ALIGNMENT 0 YS2-18p14.q1k chr12 453 62 489482 489481 C 392 0.00 1277 reject_low 2 ALIGNMENT 0 YS2-18p14.q1k chr12 750 588 472465 472464 C 163 0.00 1277 reject_low 4 ALIGNMENT 0 YS2-18p14.q1k chr12 750 588 489349 489348 C 163 0.00 1277 reject_low 2 ALIGNMENT 0 YS2-18p14.q1k chr06 62 846 31622 31621 F 785 0.00 1277 reject_low 3 ALIGNMENT 0 YS2-18p14.q1k chr12 750 588 482045 482044 C 163 0.00 1277 reject_low 5 ALIGNMENT 1027 YS2-18p14.p1k chr12 42 1193 466119 467289 F 1152 97.14 1430 reject_low 1 ALIGNMENT 119 YS2-18p14.q1k chr12 587 469 482044 482162 C 119 100.00 1277 reject_low 5 ALIGNMENT 94 YS2-18p14.q1k chr06 847 954 31622 31729 F 108 98.15 1277 reject_low 3 ALIGNMENT 909 YS2-18p14.q1k chr12 1179 72 459078 460202 C 1108 95.58 1277 reject_bad_break 0 ALIGNMENT 0 YS2-18p14.q1k chr12 750 588 485697 485696 C 163 0.00 1277 reject_low 6 ALIGNMENT 0 YS2-18p14.q1k chr12 468 62 482163 482162 C 407 0.00 1277 reject_low 5 ALIGNMENT 1027 YS2-18p14.p1k chr12 42 1193 456982 458152 F 1152 97.14 1430 reject_bad_break 0 ALIGNMENT 119 YS2-18p14.q1k chr12 587 469 485696 485814 C 119 100.00 1277 reject_low 6 ALIGNMENT 32 YS2-18p14.q1k chr12 71 37 460219 460253 C 35 100.00 1277 reject_bad_break 0 ALIGNMENT 591 YS2-18p14.q1k chr12 1179 469 468215 468930 C 711 95.64 1277 reject_low 1 ALIGNMENT 0 YS2-18p14.q1k chr12 468 62 485815 485814 C 407 0.00 1277 reject_low 6 ALIGNMENT 393 YS2-18p15.q1k vc_4 420 1 5232 5654 C 420 98.10 711 reject_vc 3 ALIGNMENT 0 YS2-18p15.q1k vc_4 62 237 1548 1547 F 176 0.00 711 reject_low 4 ALIGNMENT 358 YS2-18p15.p1k chr16 415 32 386908 387292 C 384 98.44 434 accept 0 ALIGNMENT 0 YS2-18p15.q1k vc_4 237 62 113 112 C 176 0.00 711 reject_low 9 ALIGNMENT 0 YS2-18p15.q1k vc_4 237 62 6340 6339 C 176 0.00 711 reject_low 10 ALIGNMENT 302 YS2-18p15.q1k vc_3 1 303 2689 2991 F 303 100.00 711 reject_low 7 ALIGNMENT 65 YS2-18p15.q1k vc_4 304 238 6273 6339 C 67 100.00 711 reject_low 10 ALIGNMENT 0 YS2-18p15.p1k chr16 434 416 386909 386908 C 19 0.00 434 accept 0 ALIGNMENT 302 YS2-18p15.q1k vc_1 1 303 2689 2991 F 303 100.00 711 reject_low 5 ALIGNMENT 509 YS2-18p15.q1k vc_7 704 1 1884 2569 C 704 92.47 711 reject_vc 2 ALIGNMENT 302 YS2-18p15.q1k vc_2 1 303 2322 2624 F 303 100.00 711 reject_low 6 ALIGNMENT 509 YS2-18p15.q1k vc_5 1 704 2556 3241 F 704 92.47 711 reject_vc 1 ALIGNMENT 51 YS2-18p15.q1k vc_7 54 3 6360 6411 C 52 100.00 711|1,0 reject_low 8 ALIGNMENT 198 YS2-18p15.q1k vc_4 308 693 1879 2247 F 386 86.79 711 reject_low 4 ALIGNMENT 0 YS2-18p15.q1k vc_4 305 307 1615 1878 F 3 0.00 711 reject_low 4 ALIGNMENT 0 YS2-18p15.q1k vc_7 53 54 5172 6360 C 0 0.00 711 reject_low 8 ALIGNMENT 247 YS2-18p15.q1k vc_7 303 53 4922 5172 C 251 99.60 711|0,1 reject_low 8 ALIGNMENT 65 YS2-18p15.q1k vc_4 238 304 1548 1614 F 67 100.00 711 reject_low 4 ALIGNMENT 0 YS2-18p15.q1k vc_7 304 304 4700 4921 C 1 0.00 711 reject_low 8 ALIGNMENT 65 YS2-18p15.q1k vc_4 304 238 46 112 C 67 100.00 711 reject_low 9 ALIGNMENT 95 YS2-18p15.q1k vc_7 420 305 4583 4699 C 116 94.83 711 reject_low 8 ALIGNMENT 929 YS2-18p16.q1k chr16 1137 35 601422 602547 C 1103 96.83 1249 accept 0 ALIGNMENT 934 YS2-18p16.p1k chr16 43 1109 597913 598994 F 1067 96.44 1430 accept 0 ALIGNMENT 914 YS2-18p17.q1k chr12 1069 29 973195 974251 C 1041 97.41 1216 accept 0 ALIGNMENT 951 YS2-18p17.p1k chr12 34 1147 970069 971191 F 1114 96.05 1428 accept 0 ALIGNMENT 0 YS2-18p18.q1k chr10 97 62 203692 203691 C 36 0.00 1264 reject_low 4 ALIGNMENT 322 YS2-18p18.p1k chr07 675 1036 110859 111221 F 362 97.79 1399 reject_low 17 ALIGNMENT 950 YS2-18p18.p1k chr13 35 1104 503129 504206 F 1070 98.32 1399 accept_chi 0 ALIGNMENT 343 YS2-18p18.q1k chr16 99 470 442738 443109 F 372 98.92 1264 reject_low 7 ALIGNMENT 315 YS2-18p18.p1k chr05 1036 674 354364 354727 C 363 96.97 1399 reject_low 11 ALIGNMENT 0 YS2-18p18.p1k chr04 62 674 437146 437145 F 613 0.00 1399 reject_low 16 ALIGNMENT 0 YS2-18p18.q1k chr10 869 471 197465 197464 C 399 0.00 1264 reject_low 18 ALIGNMENT 326 YS2-18p18.q1k chr13 100 470 808536 808905 F 371 97.57 1264 reject_low 12 ALIGNMENT 0 YS2-18p18.q1k chr14 869 473 561607 561606 C 397 0.00 1264 reject_low 21 ALIGNMENT 0 YS2-18p18.q1k chr02 62 99 35848 35847 F 38 0.00 1264 reject_low 2 ALIGNMENT 0 YS2-18p18.p1k chr10 62 674 197464 197463 F 613 0.00 1399 reject_low 4 ALIGNMENT 0 YS2-18p18.q1k chr14 869 471 96452 96451 C 399 0.00 1264 reject_low 26 ALIGNMENT 0 YS2-18p18.p1k chr10 62 674 203319 203318 F 613 0.00 1399 reject_low 13 ALIGNMENT 0 YS2-18p18.q1k chr03 924 62 169818 169817 C 863 0.00 1264 reject_low 24 ALIGNMENT 0 YS2-18p18.q1k chr08 98 62 85907 85906 C 37 0.00 1264 reject_low 20 ALIGNMENT 0 YS2-18p18.q1k chr15 869 472 703773 703772 C 398 0.00 1264 reject_low 27 ALIGNMENT 0 YS2-18p18.q1k chr07 869 471 110860 110859 C 399 0.00 1264 reject_low 22 ALIGNMENT 356 YS2-18p18.q1k chr10 470 98 203319 203691 C 373 100.00 1264 reject_low 4 ALIGNMENT 0 YS2-18p18.p1k chr14 674 62 632492 632491 C 613 0.00 1399 reject_low 10 ALIGNMENT 0 YS2-18p18.p1k chr13 674 62 808906 808905 C 613 0.00 1399 reject_low 12 ALIGNMENT 0 YS2-18p18.q1k chr16 62 98 436886 436885 F 37 0.00 1264 reject_low 6 ALIGNMENT 337 YS2-18p18.p1k chr10 675 1036 203319 203681 F 362 99.17 1399 reject_low 13 ALIGNMENT 0 YS2-18p18.q1k chr09 62 99 196650 196649 F 38 0.00 1264 reject_low 3 ALIGNMENT 355 YS2-18p18.q1k chr10 470 99 197464 197835 C 372 100.00 1264 reject_low 18 ALIGNMENT 357 YS2-18p18.q1k chr09 100 472 196650 197022 F 373 100.00 1264 reject_low 3 ALIGNMENT 325 YS2-18p18.p1k chr08 675 1036 91387 91749 F 362 98.07 1399 reject_low 15 ALIGNMENT 348 YS2-18p18.q1k chr08 472 99 85533 85906 C 374 99.20 1264 reject_low 20 ALIGNMENT 0 YS2-18p18.p1k chr14 62 672 561606 561605 F 611 0.00 1399 reject_low 14 ALIGNMENT 266 YS2-18p18.q1k chr15 471 180 703772 704063 C 292 98.29 1264|0,3 reject_low 27 ALIGNMENT 57 YS2-18p18.q1k chr15 184 100 710025 710108 C 85 94.12 1264|2,0 reject_low 19,27 ALIGNMENT 325 YS2-18p18.p1k chr16 1036 675 442747 443109 C 362 98.07 1399 reject_low 7 ALIGNMENT 0 YS2-18p18.q1k chr02 62 97 643481 643480 F 36 0.00 1264 reject_low 9 ALIGNMENT 328 YS2-18p18.p1k chr14 673 1036 561606 561970 F 364 98.08 1399 reject_low 14 ALIGNMENT 343 YS2-18p18.q1k chr08 470 100 91387 91757 C 371 98.92 1264 reject_low 5 ALIGNMENT 314 YS2-18p18.p1k chr13 1036 675 808544 808905 C 362 96.96 1399 reject_low 12 ALIGNMENT 343 YS2-18p18.q1k chr16 99 470 436886 437257 F 372 98.92 1264 reject_low 6 ALIGNMENT 0 YS2-18p18.q1k chr08 99 62 91758 91757 C 38 0.00 1264 reject_low 5 ALIGNMENT 0 YS2-18p18.q1k chr16 471 869 443109 443108 F 399 0.00 1264 reject_low 7 ALIGNMENT 0 YS2-18p18.q1k chr07 475 869 931547 931546 F 395 0.00 1264 reject_low 8 ALIGNMENT 0 YS2-18p18.q1k chr14 311 62 96610 96609 C 250 0.00 1264 reject_low 26 ALIGNMENT 345 YS2-18p18.q1k chr14 472 100 561606 561978 C 373 98.93 1264 reject_low 21 ALIGNMENT 0 YS2-18p18.q1k chr15 869 185 710026 710025 C 685 0.00 1264 reject_low 19 ALIGNMENT 0 YS2-18p18.q1k chr05 472 869 354727 354726 F 398 0.00 1264 reject_low 11 ALIGNMENT 316 YS2-18p18.p1k chr14 1036 675 632129 632491 C 362 97.24 1399 reject_low 10 ALIGNMENT 0 YS2-18p18.q1k chr09 473 869 197022 197021 F 397 0.00 1264 reject_low 3 ALIGNMENT 0 YS2-18p18.p1k chr09 672 62 197023 197022 C 611 0.00 1399 reject_low 3 ALIGNMENT 340 YS2-18p18.p1k chr09 1036 673 196658 197022 C 364 99.18 1399 reject_low 3 ALIGNMENT 0 YS2-18p18.p1k chr16 674 62 437258 437257 C 613 0.00 1399 reject_low 6 ALIGNMENT 0 YS2-18p18.q1k chr14 99 62 561979 561978 C 38 0.00 1264 reject_low 21 ALIGNMENT 0 YS2-18p18.q1k chr07 99 62 111230 111229 C 38 0.00 1264 reject_low 22 ALIGNMENT 0 YS2-18p18.p1k chr14 62 674 96451 96450 F 613 0.00 1399 reject_low 25 ALIGNMENT 325 YS2-18p18.p1k chr16 1036 675 436895 437257 C 362 98.07 1399 reject_low 6 ALIGNMENT 0 YS2-18p18.q1k chr15 182 183 704061 710026 C 0 0.00 1264 reject_low 27 ALIGNMENT 0 YS2-18p18.p1k chr07 62 674 110859 110858 F 613 0.00 1399 reject_low 17 ALIGNMENT 319 YS2-18p18.p1k chr02 1036 675 643491 643853 C 362 97.51 1399 reject_low 9 ALIGNMENT 0 YS2-18p18.q1k chr04 869 471 437147 437146 C 399 0.00 1264 reject_low 23 ALIGNMENT 0 YS2-18p18.q1k chr04 99 62 437516 437515 C 38 0.00 1264 reject_low 23 ALIGNMENT 0 YS2-18p18.p1k chr08 62 674 91387 91386 F 613 0.00 1399 reject_low 15 ALIGNMENT 337 YS2-18p18.p1k chr10 675 1036 197464 197826 F 362 99.17 1399 reject_low 4 ALIGNMENT 0 YS2-18p18.q1k chr16 471 869 437257 437256 F 399 0.00 1264 reject_low 6 ALIGNMENT 0 YS2-18p18.q1k chr08 869 471 91388 91387 C 399 0.00 1264 reject_low 5 ALIGNMENT 309 YS2-18p18.q1k chr07 92 474 931166 931547 F 383 95.30 1264 reject_low 8 ALIGNMENT 0 YS2-18p18.p1k chr14 834 910 96609 96608 F 77 0.00 1399 reject_low 25 ALIGNMENT 0 YS2-18p18.q1k chr15 99 62 710109 710108 C 38 0.00 1264 reject_low 19,27 ALIGNMENT 0 YS2-18p18.q1k chr14 471 869 632491 632490 F 399 0.00 1264 reject_low 10 ALIGNMENT 262 YS2-18p18.p1k chr15 674 964 703772 704062 F 291 97.94 1399 reject_low 19 ALIGNMENT 340 YS2-18p18.q1k chr07 470 100 110859 111229 C 371 98.65 1264 reject_low 22 ALIGNMENT 311 YS2-18p18.q1k chr04 470 100 437146 437515 C 371 96.23 1264 reject_low 23 ALIGNMENT 0 YS2-18p18.p1k chr05 673 62 354728 354727 C 612 0.00 1399 reject_low 11 ALIGNMENT 0 YS2-18p18.p1k chr16 674 62 443110 443109 C 613 0.00 1399 reject_low 7 ALIGNMENT 357 YS2-18p18.q1k chr02 100 472 35848 36220 F 373 100.00 1264 reject_low 2 ALIGNMENT 145 YS2-18p18.p1k chr14 675 833 96451 96609 F 159 98.11 1399 reject_low 25 ALIGNMENT 0 YS2-18p18.p1k chr02 674 62 643854 643853 C 613 0.00 1399 reject_low 9 ALIGNMENT 145 YS2-18p18.q1k chr14 470 312 96451 96609 C 159 98.11 1264 reject_low 26 ALIGNMENT 0 YS2-18p18.q1k chr07 62 91 931166 931165 F 30 0.00 1264 reject_low 8 ALIGNMENT 0 YS2-18p18.q1k chr05 62 99 354356 354355 F 38 0.00 1264 reject_low 11 ALIGNMENT 0 YS2-18p18.q1k chr10 869 471 203320 203319 C 399 0.00 1264 reject_low 4 ALIGNMENT 0 YS2-18p18.p1k chr08 62 672 85533 85532 F 611 0.00 1399 reject_low 5 ALIGNMENT 338 YS2-18p18.q1k chr02 98 470 643481 643853 F 373 98.39 1264 reject_low 9 ALIGNMENT 0 YS2-18p18.q1k chr08 869 473 85534 85533 C 397 0.00 1264 reject_low 20 ALIGNMENT 0 YS2-18p18.p1k chr07 670 62 931548 931547 C 609 0.00 1399 reject_low 8 ALIGNMENT 297 YS2-18p18.p1k chr07 1036 671 931182 931547 C 366 95.08 1399 reject_low 8 ALIGNMENT 0 YS2-18p18.q1k chr13 62 99 808536 808535 F 38 0.00 1264 reject_low 12 ALIGNMENT 334 YS2-18p18.q1k chr14 100 470 632121 632491 F 371 98.11 1264 reject_low 10 ALIGNMENT 331 YS2-18p18.p1k chr08 673 1036 85533 85897 F 364 98.35 1399 reject_low 5 ALIGNMENT 0 YS2-18p18.q1k chr16 62 98 442738 442737 F 37 0.00 1264 reject_low 7 ALIGNMENT 0 YS2-18p18.p1k chr02 672 62 36221 36220 C 611 0.00 1399 reject_low 2 ALIGNMENT 978 YS2-18p18.q1k chr13 1111 26 503128 504215 C 1086 98.53 1264 accept_chi 1 ALIGNMENT 0 YS2-18p18.q1k chr10 98 62 197836 197835 C 37 0.00 1264 reject_low 18 ALIGNMENT 302 YS2-18p18.p1k chr04 675 1040 437146 437512 F 366 95.63 1399 reject_low 16 ALIGNMENT 332 YS2-18p18.q1k chr05 100 471 354356 354727 F 372 97.85 1264 reject_low 11 ALIGNMENT 0 YS2-18p18.q1k chr02 473 869 36220 36219 F 397 0.00 1264 reject_low 2 ALIGNMENT 0 YS2-18p18.q1k chr14 62 99 632121 632120 F 38 0.00 1264 reject_low 10 ALIGNMENT 340 YS2-18p18.p1k chr02 1036 673 35856 36220 C 364 99.18 1399 reject_low 2 ALIGNMENT 0 YS2-18p18.p1k chr15 62 673 703772 703771 F 612 0.00 1399 reject_low 19 ALIGNMENT 0 YS2-18p18.q1k chr02 471 869 643853 643852 F 399 0.00 1264 reject_low 9 ALIGNMENT 32 YS2-18p18.q1k chr03 990 925 169752 169817 C 66 84.85 1264 reject_low 24 ALIGNMENT 0 YS2-18p18.q1k chr13 471 869 808905 808904 F 399 0.00 1264 reject_low 12 ALIGNMENT 1076 YS2-18p23.p1k chr15 1213 35 657244 658434 C 1179 97.96 1418 accept 0 ALIGNMENT 1011 YS2-18p23.q1k chr15 28 1163 653898 655029 F 1136 97.45 1173 accept 0 ALIGNMENT 427 YS2-19a01.q1k chr10 902 82 4234 5051 C 821 84.90 1363 ambiguous_tel 9 ALIGNMENT 1038 YS2-19a01.p1k chr05 29 1170 154870 156014 F 1142 97.90 1255 accept 0 ALIGNMENT 0 YS2-19a01.q1k chr12 635 463 3881 3952 C 173 0.00 1363 ambiguous_tel 14 ALIGNMENT 334 YS2-19a01.q1k chr12 335 902 1067173 1067737 F 568 86.97 1363 ambiguous_tel 10 ALIGNMENT 38 YS2-19a01.q1k chr12 679 636 3837 3880 C 44 95.45 1363 ambiguous_tel 14 ALIGNMENT 443 YS2-19a01.q1k chr16 902 82 3772 4588 C 821 85.51 1363 ambiguous_tel 3 ALIGNMENT 34 YS2-19a01.q1k chr06 462 405 2990 3046 C 58 87.93 1363 ambiguous_tel 13 ALIGNMENT 0 YS2-19a01.q1k chr06 635 463 2918 2989 C 173 0.00 1363 ambiguous_tel 13 ALIGNMENT 34 YS2-19a01.q1k chr02 462 405 4154 4210 C 58 87.93 1363 ambiguous_tel 12 ALIGNMENT 0 YS2-19a01.q1k chr02 635 463 4082 4153 C 173 0.00 1363 ambiguous_tel 12 ALIGNMENT 443 YS2-19a01.q1k chr05 82 902 572212 573028 F 821 85.51 1363 ambiguous_tel 2 ALIGNMENT 435 YS2-19a01.q1k chr04 82 867 1527383 1528164 F 786 86.01 1363 ambiguous_tel 6 ALIGNMENT 427 YS2-19a01.q1k chr09 902 82 4251 5068 C 821 84.90 1363 ambiguous_tel 8 ALIGNMENT 440 YS2-19a01.q1k chr14 895 82 3870 4679 C 814 85.50 1363 ambiguous_tel 5 ALIGNMENT 257 YS2-19a01.q1k chr05 759 335 4089 4510 C 425 87.53 1363 ambiguous_tel 11 ALIGNMENT 38 YS2-19a01.q1k chr02 679 636 4038 4081 C 44 95.45 1363 ambiguous_tel 12 ALIGNMENT 452 YS2-19a01.q1k chr15 82 902 1086548 1087364 F 821 85.87 1363 ambiguous_tel 1 ALIGNMENT 34 YS2-19a01.q1k chr12 462 405 3953 4009 C 58 87.93 1363 ambiguous_tel 14 ALIGNMENT 440 YS2-19a01.q1k chr07 82 896 1086289 1087099 F 815 85.52 1363 ambiguous_tel 4 ALIGNMENT 435 YS2-19a01.q1k chr12 82 867 1073584 1074365 F 786 86.01 1363 ambiguous_tel 7 ALIGNMENT 38 YS2-19a01.q1k chr06 679 636 2874 2917 C 44 95.45 1363 ambiguous_tel 13 ALIGNMENT 87 YS2-19a02.q1k vc_4 253 165 1446 1534 C 89 100.00 1454 reject_low 18 ALIGNMENT 0 YS2-19a02.q1k vc_1 125 62 2512 2511 C 64 0.00 1454 reject_low 10 ALIGNMENT 43 YS2-19a02.q1k vc_4 624 561 48 111 C 64 89.06 1454 reject_low 18 ALIGNMENT 363 YS2-19a02.q1k vc_3 165 624 2531 2990 F 460 93.48 1454 reject_low 5 ALIGNMENT 0 YS2-19a02.q1k vc_4 62 125 5832 5831 F 64 0.00 1454 reject_low 8 ALIGNMENT 0 YS2-19a02.q1k vc_5 409 163 2 1 C 247 0.00 1454 reject_low 16 ALIGNMENT 44 YS2-19a02.q1k vc_7 376 325 6360 6411 C 52 96.15 1454|1,0 reject_low 9 ALIGNMENT 0 YS2-19a02.q1k vc_5 62 164 2398 2397 F 103 0.00 1454 reject_vc 0 ALIGNMENT 0 YS2-19a02.q1k vc_4 166 165 5872 6353 F 0 0.00 1454 reject_low 8 ALIGNMENT 363 YS2-19a02.q1k vc_2 165 624 2164 2623 F 460 93.48 1454 reject_low 4 ALIGNMENT 0 YS2-19a02.q1k vc_4 625 632 1613 1881 F 8 0.00 1454 reject_low 7 ALIGNMENT 0 YS2-19a02.q1k vc_3 125 62 2512 2511 C 64 0.00 1454 reject_low 12 ALIGNMENT 0 YS2-19a02.q1k vc_7 166 409 100 99 F 244 0.00 1454 reject_low 14 ALIGNMENT 113 YS2-19a02.q1k vc_4 633 849 1882 2096 F 217 84.79 1454 reject_low 7 ALIGNMENT 0 YS2-19a02.q1k vc_7 62 127 63 62 F 66 0.00 1454 reject_low 14 ALIGNMENT 40 YS2-19a02.q1k vc_4 126 165 5832 5871 F 40 100.00 1454 reject_low 8 ALIGNMENT 38 YS2-19a02.q1k vc_7 128 165 63 100 F 38 100.00 1454 reject_low 14 ALIGNMENT 0 YS2-19a02.q1k vc_2 125 62 2145 2144 C 64 0.00 1454 reject_low 11 ALIGNMENT 405 YS2-19a02.q1k vc_4 739 165 5238 5812 C 575 90.78 1454 reject_low 2 ALIGNMENT 0 YS2-19a02.q1k vc_4 327 409 6514 6513 F 83 0.00 1454 reject_low 8 ALIGNMENT 363 YS2-19a02.q1k vc_1 165 624 2531 2990 F 460 93.48 1454 reject_low 3 ALIGNMENT 0 YS2-19a02.q1k vc_3 409 166 2473 2472 C 244 0.00 1454 reject_low 12 ALIGNMENT 475 YS2-19a02.q1k vc_7 849 165 2045 2727 C 685 90.22 1454 reject_vc 1 ALIGNMENT 0 YS2-19a02.q1k vc_7 324 62 6412 6411 C 263 0.00 1454 reject_low 9 ALIGNMENT 475 YS2-19a02.q1k vc_5 165 849 2398 3080 F 685 90.22 1454 reject_vc 0 ALIGNMENT 0 YS2-19a02.q1k vc_4 327 560 288 1548 F 234 0.00 1454 reject_low 7 ALIGNMENT 0 YS2-19a02.q1k vc_7 62 127 13525 13524 F 66 0.00 1454 reject_low 15 ALIGNMENT 43 YS2-19a02.q1k vc_4 624 561 6275 6338 C 64 89.06 1454 reject_low 17 ALIGNMENT 36 YS2-19a02.q1k vc_5 162 127 1 36 C 36 100.00 1454 reject_low 16 ALIGNMENT 0 YS2-19a02.q1k vc_3 62 164 2531 2530 F 103 0.00 1454 reject_low 5 ALIGNMENT 165 YS2-19a02.q1k vc_7 624 375 4923 5172 C 250 89.20 1454|0,1 reject_low 9 ALIGNMENT 40 YS2-19a02.q1k vc_2 165 126 2105 2144 C 40 100.00 1454 reject_low 11 ALIGNMENT 0 YS2-19a02.q1k vc_5 126 62 5064 5063 C 65 0.00 1454 reject_low 13 ALIGNMENT 0 YS2-19a02.q1k vc_4 164 62 5813 5812 C 103 0.00 1454 reject_low 2 ALIGNMENT 0 YS2-19a02.q1k vc_2 409 166 2106 2105 C 244 0.00 1454 reject_low 11 ALIGNMENT 0 YS2-19a02.q1k vc_4 164 62 1535 1534 C 103 0.00 1454 reject_low 18 ALIGNMENT 38 YS2-19a02.q1k vc_7 128 165 13525 13562 F 38 100.00 1454 reject_low 15 ALIGNMENT 154 YS2-19a02.q1k vc_4 165 326 126 287 F 162 98.77 1454 reject_low 7 ALIGNMENT 40 YS2-19a02.q1k vc_1 165 126 2472 2511 C 40 100.00 1454 reject_low 10 ALIGNMENT 0 YS2-19a02.q1k chr04 126 409 68156 68155 F 284 0.00 1454 reject_low 6 ALIGNMENT 52 YS2-19a02.q1k vc_7 739 633 4589 4693 C 107 84.11 1454 reject_low 9 ALIGNMENT 154 YS2-19a02.q1k vc_4 165 326 6353 6514 F 162 98.77 1454|1,0 reject_low 8 ALIGNMENT 0 YS2-19a02.q1k vc_7 632 625 4694 4922 C 8 0.00 1454 reject_low 9 ALIGNMENT 0 YS2-19a02.q1k vc_7 164 62 2728 2727 C 103 0.00 1454 reject_vc 1 ALIGNMENT 0 YS2-19a02.q1k vc_4 62 164 126 125 F 103 0.00 1454 reject_low 7 ALIGNMENT 0 YS2-19a02.q1k vc_1 409 166 2473 2472 C 244 0.00 1454 reject_low 10 ALIGNMENT 0 YS2-19a02.q1k vc_4 560 62 6339 6338 C 499 0.00 1454 reject_low 17 ALIGNMENT 78 YS2-19a02.q1k chr04 40 125 68072 68156 F 86 97.67 1454 reject_low 6 ALIGNMENT 0 YS2-19a02.q1k vc_5 126 62 37 36 C 65 0.00 1454 reject_low 16 ALIGNMENT 43 YS2-19a02.q1k vc_4 561 624 1549 1612 F 64 89.06 1454 reject_low 7 ALIGNMENT 0 YS2-19a02.q1k vc_1 62 164 2531 2530 F 103 0.00 1454 reject_low 3 ALIGNMENT 39 YS2-19a02.q1k vc_5 165 127 5025 5063 C 39 100.00 1454 reject_low 13 ALIGNMENT 0 YS2-19a02.q1k vc_4 560 254 112 1445 C 307 0.00 1454 reject_low 18 ALIGNMENT 40 YS2-19a02.q1k vc_3 165 126 2472 2511 C 40 100.00 1454 reject_low 12 ALIGNMENT 0 YS2-19a02.q1k vc_7 375 376 5172 6360 C 0 0.00 1454 reject_low 9 ALIGNMENT 0 YS2-19a02.q1k vc_7 166 409 13562 13561 F 244 0.00 1454 reject_low 15 ALIGNMENT 0 YS2-19a02.q1k vc_5 409 166 5026 5025 C 244 0.00 1454 reject_low 13 ALIGNMENT 0 YS2-19a02.q1k vc_2 62 164 2164 2163 F 103 0.00 1454 reject_low 4 ALIGNMENT 1020 YS2-19a04.q1k chr12 1243 36 106496 107720 C 1208 95.36 1462 accept 0 ALIGNMENT 992 YS2-19a04.p1k chr12 32 1254 101977 103204 F 1223 94.77 1373 accept 0 ALIGNMENT 0 YS2-19a05.q1k chr04 62 345 549467 549466 F 284 0.00 1411 reject_low 1 ALIGNMENT 83 YS2-19a05.q1k chr04 346 1049 549467 550175 F 704 71.45 1411 reject_low 1 ALIGNMENT 1068 YS2-19a05.q1k chr02 30 1240 374249 375474 F 1211 97.03 1411 accept 0 ALIGNMENT 21 YS2-19a05.q1k chr04 1139 1185 550267 550315 F 47 82.98 1411 reject_low 1 ALIGNMENT 0 YS2-19a05.q1k chr04 1050 1138 550176 550266 F 89 0.00 1411 reject_low 1 ALIGNMENT 1036 YS2-19a05.p1k chr02 1219 33 377472 378667 C 1187 96.55 1300 accept 0 ALIGNMENT 957 YS2-19a06.p1k chr05 1239 30 187308 188536 C 1210 94.13 1342 accept 0 ALIGNMENT 1009 YS2-19a06.q1k chr05 41 1223 184143 185336 F 1183 95.52 1410 accept 0 ALIGNMENT 1003 YS2-19a07.p1k chr10 1149 34 87667 88790 C 1116 97.94 1285 accept 0 ALIGNMENT 840 YS2-19a07.q1k chr10 32 1238 85723 86935 F 1207 91.30 1403 accept 0 ALIGNMENT 1015 YS2-19a08.p1k chr14 1227 37 110599 111804 C 1191 95.80 1351 accept 0 ALIGNMENT 999 YS2-19a08.q1k chr14 30 1193 106117 107304 F 1164 96.56 1442 accept 0 ALIGNMENT 712 YS2-19a13.q1k chr11 943 40 89154 90053 C 904 93.58 1365 accept 0 ALIGNMENT 1015 YS2-19a13.p1k chr11 31 1242 87702 88917 F 1212 95.87 1283 accept 0 ALIGNMENT 946 YS2-19a14.q1k chr14 31 1194 239045 240203 F 1164 94.85 1446 accept 0 ALIGNMENT 1001 YS2-19a14.p1k chr14 1183 33 240524 241690 C 1151 96.70 1291 accept 0 ALIGNMENT 780 YS2-19a15.q1k chr01 39 1153 74522 75631 F 1115 91.21 1366 accept 0 ALIGNMENT 1069 YS2-19a15.p1k chr01 1254 38 77684 78910 C 1217 96.71 1271 accept 0 ALIGNMENT 904 YS2-19a17.q1k chr02 1117 45 631615 632703 C 1073 96.83 1324 accept_chi 1 ALIGNMENT 1044 YS2-19a17.p1k chr04 31 1256 149817 151041 F 1226 96.08 1268 accept_chi 0 ALIGNMENT 992 YS2-19a18.q1k chr04 25 1127 1314798 1315914 F 1103 98.19 1348 accept 0 ALIGNMENT 992 YS2-19a18.p1k chr04 1170 30 1319337 1320485 C 1141 95.97 1303 accept 0 ALIGNMENT 0 YS2-19a19.p1k chr13 686 668 915707 915706 C 19 0.00 686 ambiguous_tel 1 ALIGNMENT 590 YS2-19a19.p1k chr13 667 40 915706 916335 C 628 99.04 686 ambiguous_tel 1 ALIGNMENT 598 YS2-19a19.q1k chr13 38 667 915706 916336 F 630 99.37 668 ambiguous_tel 0 ALIGNMENT 1063 YS2-19a20.p1k chr10 29 1284 281472 282741 F 1256 95.70 1290 accept 0 ALIGNMENT 1054 YS2-19a20.q1k chr10 1323 30 285355 286654 C 1294 95.05 1421 accept 0 ALIGNMENT 950 YS2-19a21.p1k chr07 1137 33 918527 919637 C 1105 96.65 1202 accept 0 ALIGNMENT 1052 YS2-19a21.q1k chr07 29 1228 913891 915090 F 1200 96.58 1273 accept 0 ALIGNMENT 41 YS2-19a22.q1k vc_2 347 307 2105 2145 C 41 100.00 347 reject_low 3 ALIGNMENT 0 YS2-19a22.q1k vc_2 306 62 2146 2145 C 245 0.00 347 reject_low 3 ALIGNMENT 0 YS2-19a22.q1k vc_1 306 62 2513 2512 C 245 0.00 347 reject_low 2 ALIGNMENT 41 YS2-19a22.q1k vc_3 347 307 2472 2512 C 41 100.00 347 reject_low 4 ALIGNMENT 0 YS2-19a22.q1k vc_4 62 306 5831 5830 F 245 0.00 347 reject_low 5 ALIGNMENT 245 YS2-19a22.p1k chr03 33 305 46816 47089 F 273 97.80 324 accept_chi 1 ALIGNMENT 0 YS2-19a22.q1k chr03 347 307 46817 46816 C 41 0.00 347 accept_chi 0 ALIGNMENT 41 YS2-19a22.q1k vc_1 347 307 2472 2512 C 41 100.00 347 reject_low 2 ALIGNMENT 0 YS2-19a22.q1k vc_7 62 309 13525 13524 F 248 0.00 347 reject_low 6 ALIGNMENT 257 YS2-19a22.q1k chr03 306 32 46816 47089 C 275 99.27 347 accept_chi 0 ALIGNMENT 41 YS2-19a22.q1k vc_4 307 347 5831 5871 F 41 100.00 347 reject_low 5 ALIGNMENT 0 YS2-19a22.q1k vc_3 306 62 2513 2512 C 245 0.00 347 reject_low 4 ALIGNMENT 0 YS2-19a22.p1k chr03 306 324 47089 47088 F 19 0.00 324 accept_chi 1 ALIGNMENT 38 YS2-19a22.q1k vc_7 310 347 13525 13562 F 38 100.00 347 reject_low 6 ALIGNMENT 980 YS2-19a23.p1k chr12 1152 35 465473 466616 C 1118 96.87 1152 accept 1 ALIGNMENT 1070 YS2-19a23.q1k chr12 35 1214 461868 463051 F 1180 97.20 1226 accept 1 ALIGNMENT 1070 YS2-19a23.q1k chr12 35 1214 452731 453914 F 1180 97.20 1226 accept 0 ALIGNMENT 980 YS2-19a23.p1k chr12 1152 35 456336 457479 C 1118 96.87 1152 accept 0 ALIGNMENT 1015 YS2-19a24.q1k chr04 1215 41 595341 596506 C 1175 96.60 1290 accept 0 ALIGNMENT 1028 YS2-19a24.p1k chr04 35 1200 594840 596000 F 1166 97.08 1206 accept 0 ALIGNMENT 967 YS2-19b01.p1k chr02 37 1135 363770 364865 F 1099 96.63 1318 accept 0 ALIGNMENT 538 YS2-19b01.q1k chr02 867 46 368366 369182 C 822 89.54 1412 accept 0 ALIGNMENT 0 YS2-19b01.p1k chrm 887 274 61877 61876 C 614 0.00 1318 reject_low 1 ALIGNMENT 0 YS2-19b01.p1k chrm 111 62 62038 62037 C 50 0.00 1318 reject_low 1 ALIGNMENT 74 YS2-19b01.p1k chrm 273 112 61876 62037 C 162 83.33 1318 reject_low 1 ALIGNMENT 0 YS2-19b02.p1k chr13 913 448 189805 189804 C 466 0.00 1287 reject_low 19 ALIGNMENT 410 YS2-19b02.p1k chr14 640 1192 96610 97172 F 553 94.03 1287 reject_low 7 ALIGNMENT 0 YS2-19b02.p1k chr15 913 448 123343 123342 C 466 0.00 1287 reject_low 30 ALIGNMENT 0 YS2-19b02.p1k chr07 913 448 535268 535267 C 466 0.00 1287 reject_low 22 ALIGNMENT 123 YS2-19b02.p1k chr16 794 660 850182 850316 C 135 99.26 1287 reject_low 37 ALIGNMENT 0 YS2-19b02.p1k chr11 62 639 457783 457782 F 578 0.00 1287 reject_low 16 ALIGNMENT 0 YS2-19b02.p1k chr15 723 448 594760 594872 C 276 0.00 1287 reject_low 45 ALIGNMENT 0 YS2-19b02.p1k chr15 659 62 600715 600714 C 598 0.00 1287 reject_low 9 ALIGNMENT 0 YS2-19b02.p1k chr02 191 62 221353 221352 C 130 0.00 1287 reject_low 24 ALIGNMENT 43 YS2-19b02.p1k chr06 710 640 143867 143937 C 71 90.14 1287 reject_low 42 ALIGNMENT 0 YS2-19b02.p1k chr13 659 62 190064 190063 C 598 0.00 1287 reject_low 10 ALIGNMENT 0 YS2-19b02.p1k chr08 62 185 543625 543624 F 124 0.00 1287 reject_low 18 ALIGNMENT 0 YS2-19b02.p1k chr16 62 191 850646 850645 F 130 0.00 1287 reject_low 31 ALIGNMENT 69 YS2-19b02.p1k chr06 384 240 137766 137904 C 145 86.90 1287 reject_low 35 ALIGNMENT 0 YS2-19b02.p1k chr02 913 448 265214 265213 C 466 0.00 1287 reject_low 20 ALIGNMENT 115 YS2-19b02.p1k chr13 186 447 372711 372981 F 262 83.59 1287 reject_low 28 ALIGNMENT 0 YS2-19b02.p1k chr10 639 62 483887 483886 C 578 0.00 1287 reject_low 5 ALIGNMENT 0 YS2-19b02.p1k chr07 191 62 535526 535525 C 130 0.00 1287 reject_low 22 ALIGNMENT 0 YS2-19b02.p1k chr06 662 62 143844 143843 C 601 0.00 1287 reject_low 32 ALIGNMENT 114 YS2-19b02.p1k chr10 447 192 483601 483865 C 256 83.59 1287 reject_low 29 ALIGNMENT 0 YS2-19b02.p1k chr07 62 659 817418 817417 F 598 0.00 1287 reject_low 3 ALIGNMENT 0 YS2-19b02.p1k chr06 662 464 138217 143570 C 199 0.00 1287 reject_low 47 ALIGNMENT 0 YS2-19b02.p1k chr08 62 659 543630 543629 F 598 0.00 1287 reject_low 8 ALIGNMENT 310 YS2-19b02.p1k chr13 640 968 362586 362914 F 329 100.00 1287 reject_low 38 ALIGNMENT 0 YS2-19b02.p1k chr04 185 62 1101673 1101672 C 124 0.00 1287 reject_low 27 ALIGNMENT 0 YS2-19b02.p1k chr04 913 448 1101403 1101402 C 466 0.00 1287 reject_low 27 ALIGNMENT 0 YS2-19b02.p1k chr10 913 448 483602 483601 C 466 0.00 1287 reject_low 29 ALIGNMENT 114 YS2-19b02.p1k chr15 447 192 123342 123606 C 256 83.59 1287 reject_low 30 ALIGNMENT 119 YS2-19b02.p1k chr11 192 447 457804 458062 F 256 83.98 1287 reject_low 26 ALIGNMENT 395 YS2-19b02.p1k chr08 660 1192 543630 544172 F 533 94.18 1287 reject_low 8 ALIGNMENT 0 YS2-19b02.p1k chr07 662 62 817388 817387 C 601 0.00 1287 reject_low 41 ALIGNMENT 0 YS2-19b02.p1k chr01 62 191 165848 165847 F 130 0.00 1287 reject_low 25 ALIGNMENT 0 YS2-19b02.p1k chr01 448 913 166111 166110 F 466 0.00 1287 reject_low 25 ALIGNMENT 260 YS2-19b02.p1k chr01 640 1164 160239 160777 F 525 85.90 1287 reject_low 13 ALIGNMENT 398 YS2-19b02.p1k chr10 1233 640 483274 483886 C 594 91.92 1287 reject_low 5 ALIGNMENT 135 YS2-19b02.p1k chr13 447 186 189804 190068 C 262 85.88 1287 reject_low 19 ALIGNMENT 0 YS2-19b02.p1k chr13 62 185 372711 372710 F 124 0.00 1287 reject_low 28 ALIGNMENT 121 YS2-19b02.p1k chr01 192 447 165848 166111 F 256 84.38 1287 reject_low 25 ALIGNMENT 115 YS2-19b02.p1k chr04 447 186 1101402 1101672 C 262 83.59 1287 reject_low 27 ALIGNMENT 0 YS2-19b02.p1k chr13 185 62 190069 190068 C 124 0.00 1287 reject_low 19 ALIGNMENT 131 YS2-19b02.p1k chr13 192 447 357025 357283 F 256 85.55 1287 reject_low 38 ALIGNMENT 0 YS2-19b02.p1k chr01 448 639 160524 165826 F 192 0.00 1287 reject_low 44 ALIGNMENT 38 YS2-19b02.p1k chr16 344 454 850353 850463 F 111 81.08 1287 reject_low 34 ALIGNMENT 442 YS2-19b02.p1k chr13 640 1233 357004 357610 F 594 94.11 1287 reject_low 1 ALIGNMENT 0 YS2-19b02.p1k chr15 636 62 123631 123630 C 575 0.00 1287 reject_low 11 ALIGNMENT 310 YS2-19b02.p1k chr11 640 968 517095 517423 F 329 100.00 1287 reject_low 14 ALIGNMENT 0 YS2-19b02.p1k chr02 913 448 221093 221092 C 466 0.00 1287 reject_low 24 ALIGNMENT 114 YS2-19b02.p1k chr16 192 447 850646 850910 F 256 83.59 1287 reject_low 31 ALIGNMENT 0 YS2-19b02.p1k chr11 62 191 517116 517115 F 130 0.00 1287 reject_low 23 ALIGNMENT 0 YS2-19b02.p1k chr16 913 795 850183 850182 C 119 0.00 1287 reject_low 37 ALIGNMENT 0 YS2-19b02.p1k chr14 62 191 96631 96630 F 130 0.00 1287 reject_low 21 ALIGNMENT 0 YS2-19b02.p1k chr06 639 62 143938 143937 C 578 0.00 1287 reject_low 42 ALIGNMENT 0 YS2-19b02.p1k chr14 62 639 96610 96609 F 578 0.00 1287 reject_low 7 ALIGNMENT 0 YS2-19b02.p1k chr14 448 913 96889 96888 F 466 0.00 1287 reject_low 21 ALIGNMENT 0 YS2-19b02.p1k chr15 659 448 595133 600454 C 212 0.00 1287 reject_low 40 ALIGNMENT 0 YS2-19b02.p1k chr07 62 185 817413 817412 F 124 0.00 1287 reject_low 17 ALIGNMENT 0 YS2-19b02.p1k chr06 193 62 143844 143843 C 132 0.00 1287 reject_low 47 ALIGNMENT 392 YS2-19b02.p1k chr15 1152 660 600214 600714 C 493 95.74 1287 reject_low 9 ALIGNMENT 0 YS2-19b02.p1k chr06 660 62 158664 158663 C 599 0.00 1287 reject_low 36 ALIGNMENT 0 YS2-19b02.p1k chr16 855 913 850392 850391 F 59 0.00 1287 reject_low 43 ALIGNMENT 0 YS2-19b02.p1k chr16 448 913 850910 850909 F 466 0.00 1287 reject_low 31 ALIGNMENT 59 YS2-19b02.p1k chr06 463 194 143571 143843 C 270 77.41 1287 reject_low 47 ALIGNMENT 28 YS2-19b02.p1k chr16 814 854 850353 850392 F 41 95.12 1287 reject_low 43 ALIGNMENT 121 YS2-19b02.p1k chr01 192 447 160260 160523 F 256 84.38 1287 reject_low 44 ALIGNMENT 307 YS2-19b02.p1k chr07 968 640 535218 535546 C 329 99.70 1287 reject_low 15 ALIGNMENT 0 YS2-19b02.p1k chr15 185 62 600720 600719 C 124 0.00 1287 reject_low 40 ALIGNMENT 0 YS2-19b02.p1k chr13 448 913 372981 372980 F 466 0.00 1287 reject_low 28 ALIGNMENT 154 YS2-19b02.p1k chr06 1164 663 143333 143843 C 502 80.68 1287 reject_low 32 ALIGNMENT 0 YS2-19b02.p1k chr01 62 639 160239 160238 F 578 0.00 1287 reject_low 13 ALIGNMENT 0 YS2-19b02.p1k chr06 913 385 137767 137766 C 529 0.00 1287 reject_low 35 ALIGNMENT 0 YS2-19b02.p1k chr11 62 191 457804 457803 F 130 0.00 1287 reject_low 26 ALIGNMENT 0 YS2-19b02.p1k chr06 705 464 137908 137943 C 242 0.00 1287 reject_low 46 ALIGNMENT 0 YS2-19b02.p1k chr06 913 640 158217 158216 C 274 0.00 1287 accept 0 ALIGNMENT 0 YS2-19b02.p1k chr04 659 62 1101668 1101667 C 598 0.00 1287 reject_low 6 ALIGNMENT 135 YS2-19b02.p1k chr07 186 447 817413 817677 F 262 85.88 1287 reject_low 17 ALIGNMENT 0 YS2-19b02.p1k chr13 448 659 362866 372715 F 212 0.00 1287 reject_low 12 ALIGNMENT 131 YS2-19b02.p1k chr13 192 447 362607 362865 F 256 85.55 1287 reject_low 12 ALIGNMENT 0 YS2-19b02.p1k chr15 191 62 123607 123606 C 130 0.00 1287 reject_low 30 ALIGNMENT 337 YS2-19b02.p1k chr15 1164 637 123088 123630 C 528 90.53 1287 reject_low 11 ALIGNMENT 567 YS2-19b02.p1k chr06 639 35 158216 158821 C 605 99.50 1287 accept 0 ALIGNMENT 87 YS2-19b02.p1k chr16 324 186 850182 850321 C 139 89.21 1287 reject_low 33 ALIGNMENT 0 YS2-19b02.p1k chr02 191 62 226935 226934 C 130 0.00 1287 reject_low 39 ALIGNMENT 0 YS2-19b02.p1k chr06 239 62 137905 137904 C 178 0.00 1287 reject_low 35 ALIGNMENT 135 YS2-19b02.p1k chr15 447 186 600455 600719 C 262 85.88 1287 reject_low 40 ALIGNMENT 416 YS2-19b02.p1k chr02 1233 660 264886 265472 C 574 93.73 1287 reject_low 4 ALIGNMENT 0 YS2-19b02.p1k chr13 62 639 357004 357003 F 578 0.00 1287 reject_low 1 ALIGNMENT 0 YS2-19b02.p1k chr07 639 62 535547 535546 C 578 0.00 1287 reject_low 15 ALIGNMENT 297 YS2-19b02.p1k chr02 968 640 221043 221373 C 329 98.78 1287 reject_low 39 ALIGNMENT 0 YS2-19b02.p1k chr02 639 448 221374 226675 C 192 0.00 1287 reject_low 39 ALIGNMENT 0 YS2-19b02.p1k chr15 185 62 595138 595137 C 124 0.00 1287 reject_low 45 ALIGNMENT 207 YS2-19b02.p1k chr01 640 968 165827 166160 F 329 89.97 1287 reject_low 44 ALIGNMENT 57 YS2-19b02.p1k chr07 774 663 817278 817387 C 112 86.61 1287 reject_low 41 ALIGNMENT 59 YS2-19b02.p1k chr06 463 194 137944 138216 C 270 77.41 1287 reject_low 46 ALIGNMENT 0 YS2-19b02.p1k chr07 913 775 817279 817278 C 139 0.00 1287 reject_low 41 ALIGNMENT 0 YS2-19b02.p1k chr11 448 913 458062 458061 F 466 0.00 1287 reject_low 26 ALIGNMENT 101 YS2-19b02.p1k chr06 972 663 137906 138216 C 310 81.29 1287 reject_low 47 ALIGNMENT 0 YS2-19b02.p1k chr08 448 913 543889 543888 F 466 0.00 1287 reject_low 18 ALIGNMENT 441 YS2-19b02.p1k chr02 1229 640 226353 226955 C 590 94.24 1287 reject_low 2 ALIGNMENT 0 YS2-19b02.p1k chr16 659 62 850317 850316 C 598 0.00 1287 reject_low 37 ALIGNMENT 0 YS2-19b02.p1k chr02 659 62 265473 265472 C 598 0.00 1287 reject_low 4 ALIGNMENT 0 YS2-19b02.p1k chr07 448 913 817677 817676 F 466 0.00 1287 reject_low 17 ALIGNMENT 0 YS2-19b02.p1k chr16 62 343 850353 850352 F 282 0.00 1287 reject_low 34 ALIGNMENT 135 YS2-19b02.p1k chr08 186 447 543625 543889 F 262 85.88 1287 reject_low 18 ALIGNMENT 0 YS2-19b02.p1k chr01 62 191 160260 160259 F 130 0.00 1287 reject_low 44 ALIGNMENT 159 YS2-19b02.p1k chr06 968 706 137658 137907 C 263 91.25 1287 reject_low 46 ALIGNMENT 134 YS2-19b02.p1k chr14 192 447 96631 96889 F 256 85.94 1287 reject_low 21 ALIGNMENT 0 YS2-19b02.p1k chr13 62 191 362607 362606 F 130 0.00 1287 reject_low 12 ALIGNMENT 0 YS2-19b02.p1k chr16 913 325 850183 850182 C 589 0.00 1287 reject_low 33 ALIGNMENT 387 YS2-19b02.p1k chr16 640 1188 850625 851189 F 549 92.90 1287 reject_low 34 ALIGNMENT 0 YS2-19b02.p1k chr06 913 711 143868 143867 C 203 0.00 1287 reject_low 42 ALIGNMENT 418 YS2-19b02.p1k chr07 660 1233 817418 818004 F 574 93.73 1287 reject_low 3 ALIGNMENT 0 YS2-19b02.p1k chr02 185 62 265478 265477 C 124 0.00 1287 reject_low 20 ALIGNMENT 286 YS2-19b02.p1k chr15 968 660 594824 595132 C 309 99.68 1287 reject_low 40 ALIGNMENT 126 YS2-19b02.p1k chr06 919 661 158408 158663 C 259 85.71 1287 reject_low 36 ALIGNMENT 0 YS2-19b02.p1k chr10 191 62 483866 483865 C 130 0.00 1287 reject_low 29 ALIGNMENT 135 YS2-19b02.p1k chr15 447 186 594873 595137 C 262 85.88 1287 reject_low 45 ALIGNMENT 386 YS2-19b02.p1k chr13 1152 660 189563 190063 C 493 95.33 1287 reject_low 10 ALIGNMENT 0 YS2-19b02.p1k chr11 448 913 517374 517373 F 466 0.00 1287 reject_low 23 ALIGNMENT 81 YS2-19b02.p1k chr15 853 724 594630 594759 C 130 90.00 1287 reject_low 45 ALIGNMENT 132 YS2-19b02.p1k chr02 447 186 265213 265477 C 262 85.50 1287 reject_low 20 ALIGNMENT 0 YS2-19b02.p1k chr15 913 854 594631 594630 C 60 0.00 1287 reject_low 45 ALIGNMENT 0 YS2-19b02.p1k chr16 455 639 850464 850624 F 185 0.00 1287 reject_low 34 ALIGNMENT 381 YS2-19b02.p1k chr04 1228 660 1101080 1101667 C 569 91.92 1287 reject_low 6 ALIGNMENT 289 YS2-19b02.p1k chr11 640 968 457783 458111 F 329 97.87 1287 reject_low 16 ALIGNMENT 0 YS2-19b02.p1k chr02 639 62 226956 226955 C 578 0.00 1287 reject_low 2 ALIGNMENT 131 YS2-19b02.p1k chr11 192 447 517116 517374 F 256 85.55 1287 reject_low 23 ALIGNMENT 131 YS2-19b02.p1k chr02 447 192 226676 226934 C 256 85.55 1287 reject_low 39 ALIGNMENT 0 YS2-19b02.p1k chr11 62 639 517095 517094 F 578 0.00 1287 reject_low 14 ALIGNMENT 0 YS2-19b02.p1k chr16 62 813 850353 850352 F 752 0.00 1287 reject_low 43 ALIGNMENT 0 YS2-19b02.p1k chr13 62 191 357025 357024 F 130 0.00 1287 reject_low 38 ALIGNMENT 381 YS2-19b02.p1k chr13 660 1228 372716 373303 F 569 91.92 1287 reject_low 12 ALIGNMENT 131 YS2-19b02.p1k chr07 447 192 535267 535525 C 256 85.55 1287 reject_low 22 ALIGNMENT 0 YS2-19b02.p1k chr06 193 62 138217 138216 C 132 0.00 1287 reject_low 46 ALIGNMENT 124 YS2-19b02.p1k chr02 447 192 221092 221352 C 256 84.77 1287 reject_low 24 ALIGNMENT 0 YS2-19b02.p1k chr16 185 62 850322 850321 C 124 0.00 1287 reject_low 33 ALIGNMENT 0 YS2-19b02.p1k chr13 448 639 357284 362585 F 192 0.00 1287 reject_low 38 ALIGNMENT 1035 YS2-19b03.q1k chr15 1231 37 952480 953683 C 1195 96.57 1456 accept 0 ALIGNMENT 986 YS2-19b03.p1k chr15 33 1234 949856 951056 F 1202 94.93 1371 accept 0 ALIGNMENT 959 YS2-19b04.p1k chr10 29 1094 425106 426185 F 1066 97.56 1320 accept 0 ALIGNMENT 868 YS2-19b04.q1k chr10 964 30 430191 431134 C 935 98.61 1334 accept 0 ALIGNMENT 0 YS2-19b05.p1k chr04 62 479 340281 340280 F 418 0.00 1345 reject_low 1 ALIGNMENT 27 YS2-19b05.p1k chr04 480 520 340281 340320 F 41 97.56 1345 reject_low 1 ALIGNMENT 1035 YS2-19b05.q1k chr12 1228 41 699933 701123 C 1188 96.13 1470 accept 0 ALIGNMENT 0 YS2-19b05.p1k chr04 521 895 340320 340319 F 375 0.00 1345 reject_low 1 ALIGNMENT 758 YS2-19b05.p1k chr12 34 1013 696514 697476 F 980 94.59 1345 accept 0 ALIGNMENT 907 YS2-19b06.p1k chr04 1055 34 570861 571893 C 1022 97.65 1295 accept 0 ALIGNMENT 889 YS2-19b06.q1k chr04 36 1077 570401 571458 F 1042 96.16 1357 accept 0 ALIGNMENT 0 YS2-19b07.p1k chr04 668 370 359564 359563 C 299 0.00 668 reject_low 8 ALIGNMENT 0 YS2-19b07.p1k chr04 245 62 359686 359685 C 184 0.00 668 reject_low 8 ALIGNMENT 117 YS2-19b07.p1k chr12 366 246 875364 875484 C 121 99.17 668 reject_low 6 ALIGNMENT 0 YS2-19b07.p1k chr11 245 62 578717 578716 C 184 0.00 668 reject_low 4 ALIGNMENT 0 YS2-19b07.q1k chr07 425 664 115592 115591 F 240 0.00 664 reject_low 11 ALIGNMENT 111 YS2-19b07.q1k chr07 311 424 115479 115592 F 114 99.12 664 reject_low 11 ALIGNMENT 0 YS2-19b07.p1k chr16 638 668 769928 769927 F 31 0.00 668 accept_chi 1 ALIGNMENT 39 YS2-19b07.q1k vc_5 664 626 5025 5063 C 39 100.00 664 reject_low 17 ALIGNMENT 0 YS2-19b07.q1k vc_4 62 622 5830 5829 F 561 0.00 664 reject_low 16 ALIGNMENT 132 YS2-19b07.p1k chr15 396 248 438603 438751 C 149 96.64 668 reject_low 2 ALIGNMENT 246 YS2-19b07.p1k chr16 367 637 769658 769928 F 271 98.52 668|3,0 accept_chi 1 ALIGNMENT 0 YS2-19b07.p1k chr07 668 369 115480 115479 C 300 0.00 668 reject_low 10 ALIGNMENT 0 YS2-19b07.q1k chr11 62 309 578593 578592 F 248 0.00 664 reject_low 5 ALIGNMENT 0 YS2-19b07.q1k vc_5 625 62 37 36 C 564 0.00 664 reject_low 19 ALIGNMENT 0 YS2-19b07.q1k chr04 62 309 359563 359562 F 248 0.00 664 reject_low 9 ALIGNMENT 301 YS2-19b07.q1k chr16 623 307 769001 769317 C 317 99.37 664|0,3 accept_chi 0 ALIGNMENT 0 YS2-19b07.q1k chr12 434 664 875484 875483 F 231 0.00 664 reject_low 7 ALIGNMENT 296 YS2-19b07.p1k chr16 57 372 769001 769317 F 316 99.05 668|0,3 accept_chi 1 ALIGNMENT 0 YS2-19b07.p1k chr16 370 369 769315 769660 F 0 0.00 668 accept_chi 1 ALIGNMENT 0 YS2-19b07.p1k chr15 247 62 438752 438751 C 186 0.00 668 reject_low 2 ALIGNMENT 0 YS2-19b07.q1k chr16 664 624 769002 769001 C 41 0.00 664 accept_chi 0 ALIGNMENT 0 YS2-19b07.q1k chr07 664 425 700953 700952 C 240 0.00 664 reject_low 13 ALIGNMENT 105 YS2-19b07.p1k chr07 255 365 700952 701062 F 111 98.20 668 reject_low 12 ALIGNMENT 42 YS2-19b07.q1k vc_1 664 623 2472 2513 C 42 100.00 664 reject_low 14 ALIGNMENT 0 YS2-19b07.q1k chr16 309 310 769315 769660 C 0 0.00 664 accept_chi 0 ALIGNMENT 0 YS2-19b07.p1k chr11 668 370 578594 578593 C 299 0.00 668 reject_low 4 ALIGNMENT 246 YS2-19b07.q1k chr16 312 42 769658 769928 C 271 98.52 664|3,0 accept_chi 0 ALIGNMENT 120 YS2-19b07.p1k chr11 369 246 578593 578716 C 124 99.19 668 reject_low 4 ALIGNMENT 0 YS2-19b07.q1k chr04 434 664 359685 359684 F 231 0.00 664 reject_low 9 ALIGNMENT 0 YS2-19b07.q1k chr07 62 310 115479 115478 F 249 0.00 664 reject_low 11 ALIGNMENT 115 YS2-19b07.p1k chr04 369 246 359563 359685 C 124 98.39 668 reject_low 8 ALIGNMENT 0 YS2-19b07.q1k chr15 432 664 438751 438750 F 233 0.00 664 reject_low 3 ALIGNMENT 0 YS2-19b07.q1k vc_5 625 62 5064 5063 C 564 0.00 664 reject_low 17 ALIGNMENT 0 YS2-19b07.q1k chr12 62 312 875364 875363 F 251 0.00 664 reject_low 7 ALIGNMENT 120 YS2-19b07.q1k chr11 310 433 578593 578716 F 124 99.19 664 reject_low 5 ALIGNMENT 0 YS2-19b07.p1k chr07 254 62 115593 115592 C 193 0.00 668 reject_low 10 ALIGNMENT 0 YS2-19b07.q1k chr15 62 282 438603 438602 F 221 0.00 664 reject_low 3 ALIGNMENT 0 YS2-19b07.p1k chr07 62 254 700952 700951 F 193 0.00 668 reject_low 12 ALIGNMENT 42 YS2-19b07.q1k vc_3 664 623 2472 2513 C 42 100.00 664 reject_low 15 ALIGNMENT 38 YS2-19b07.q1k vc_7 627 664 13525 13562 F 38 100.00 664 reject_low 18 ALIGNMENT 105 YS2-19b07.q1k chr07 424 314 700952 701062 C 111 98.20 664 reject_low 13 ALIGNMENT 0 YS2-19b07.q1k vc_1 622 62 2514 2513 C 561 0.00 664 reject_low 14 ALIGNMENT 0 YS2-19b07.p1k chr12 668 367 875365 875364 C 302 0.00 668 reject_low 6 ALIGNMENT 117 YS2-19b07.q1k chr12 313 433 875364 875484 F 121 99.17 664 reject_low 7 ALIGNMENT 0 YS2-19b07.q1k vc_7 62 626 13525 13524 F 565 0.00 664 reject_low 18 ALIGNMENT 0 YS2-19b07.q1k chr07 313 62 701063 701062 C 252 0.00 664 reject_low 13 ALIGNMENT 0 YS2-19b07.q1k vc_3 622 62 2514 2513 C 561 0.00 664 reject_low 15 ALIGNMENT 0 YS2-19b07.p1k chr07 366 668 701062 701061 F 303 0.00 668 reject_low 12 ALIGNMENT 0 YS2-19b07.q1k chr11 434 664 578716 578715 F 231 0.00 664 reject_low 5 ALIGNMENT 0 YS2-19b07.p1k chr12 245 62 875485 875484 C 184 0.00 668 reject_low 6 ALIGNMENT 132 YS2-19b07.q1k chr15 283 431 438603 438751 F 149 96.64 664 reject_low 3 ALIGNMENT 36 YS2-19b07.q1k vc_5 661 626 1 36 C 36 100.00 664 reject_low 19 ALIGNMENT 0 YS2-19b07.p1k chr15 668 397 438604 438603 C 272 0.00 668 reject_low 2 ALIGNMENT 42 YS2-19b07.q1k vc_4 623 664 5830 5871 F 42 100.00 664 reject_low 16 ALIGNMENT 111 YS2-19b07.p1k chr07 368 255 115479 115592 C 114 99.12 668 reject_low 10 ALIGNMENT 115 YS2-19b07.q1k chr04 310 433 359563 359685 F 124 98.39 664 reject_low 9 ALIGNMENT 962 YS2-19b09.p1k chr04 1186 34 1221879 1223043 C 1153 96.18 1308 accept 0 ALIGNMENT 990 YS2-19b09.q1k chr04 40 1158 1220529 1221660 F 1119 97.50 1400 accept 0 ALIGNMENT 38 YS2-19b11.q1k vc_7 825 862 63 100 F 38 100.00 1415 reject_low 17 ALIGNMENT 216 YS2-19b11.q1k vc_5 862 1187 2398 2743 F 326 90.80 1415 reject_low 8 ALIGNMENT 0 YS2-19b11.q1k vc_7 62 824 13525 13524 F 763 0.00 1415 reject_low 18 ALIGNMENT 123 YS2-19b11.q1k vc_4 862 1018 126 287 F 157 94.27 1415 reject_low 10 ALIGNMENT 0 YS2-19b11.q1k vc_2 821 62 2146 2145 C 760 0.00 1415 reject_low 13 ALIGNMENT 0 YS2-19b11.q1k vc_4 861 62 5813 5812 C 800 0.00 1415 reject_low 9 ALIGNMENT 40 YS2-19b11.q1k vc_1 862 822 2472 2512 C 41 97.56 1415 reject_low 12 ALIGNMENT 0 YS2-19b11.p1k chr02 818 769 801170 801169 C 50 0.00 818 reject_low 3 ALIGNMENT 0 YS2-19b11.q1k chr02 62 85 801169 801168 F 24 0.00 1415 reject_low 2 ALIGNMENT 38 YS2-19b11.q1k vc_7 825 862 13525 13562 F 38 100.00 1415 reject_low 18 ALIGNMENT 0 YS2-19b11.q1k vc_3 62 861 2531 2530 F 800 0.00 1415 reject_low 7 ALIGNMENT 0 YS2-19b11.q1k vc_7 1016 62 6412 6411 C 955 0.00 1415 reject_low 20 ALIGNMENT 0 YS2-19b11.q1k chr02 822 896 801898 801897 F 75 0.00 1415 reject_low 2 ALIGNMENT 0 YS2-19b11.q1k vc_1 62 861 2531 2530 F 800 0.00 1415 reject_low 5 ALIGNMENT 216 YS2-19b11.q1k vc_2 862 1187 2164 2509 F 326 90.80 1415 reject_low 6 ALIGNMENT 216 YS2-19b11.q1k vc_7 1191 862 2377 2727 C 330 90.61 1415 reject_low 4 ALIGNMENT 0 YS2-19b11.q1k vc_7 1066 1067 5172 6360 C 0 0.00 1415 reject_low 20 ALIGNMENT 0 YS2-19b11.q1k chr16 824 896 932761 932760 F 73 0.00 1415 ambiguous_tel 1 ALIGNMENT 0 YS2-19b11.q1k vc_2 62 861 2164 2163 F 800 0.00 1415 reject_low 6 ALIGNMENT 749 YS2-19b11.q1k chr16 44 823 931982 932761 F 780 99.23 1415 ambiguous_tel 1 ALIGNMENT 40 YS2-19b11.q1k vc_3 862 822 2472 2512 C 41 97.56 1415 reject_low 14 ALIGNMENT 51 YS2-19b11.q1k vc_7 1191 1066 5032 5172 C 126 84.13 1415|0,1 reject_low 20 ALIGNMENT 0 YS2-19b11.q1k vc_4 863 862 5872 6353 F 0 0.00 1415 reject_low 11 ALIGNMENT 0 YS2-19b11.q1k vc_7 863 896 100 99 F 34 0.00 1415 reject_low 17 ALIGNMENT 0 YS2-19b11.q1k vc_5 824 62 36 35 C 763 0.00 1415 reject_low 19 ALIGNMENT 0 YS2-19b11.q1k vc_7 861 62 2728 2727 C 800 0.00 1415 reject_low 4 ALIGNMENT 0 YS2-19b11.q1k vc_4 62 821 5831 5830 F 760 0.00 1415 reject_low 11 ALIGNMENT 123 YS2-19b11.q1k vc_4 862 1018 6353 6514 F 157 94.27 1415|1,0 reject_low 11 ALIGNMENT 281 YS2-19b11.p1k chr02 768 32 801169 801898 C 737 80.73 818 reject_low 3 ALIGNMENT 0 YS2-19b11.q1k vc_4 861 62 1535 1534 C 800 0.00 1415 reject_low 15 ALIGNMENT 0 YS2-19b11.q1k vc_1 896 863 2473 2472 C 34 0.00 1415 reject_low 12 ALIGNMENT 35 YS2-19b11.q1k vc_5 859 825 1 35 C 35 100.00 1415 reject_low 19 ALIGNMENT 0 YS2-19b11.q1k vc_1 821 62 2513 2512 C 760 0.00 1415 reject_low 12 ALIGNMENT 0 YS2-19b11.q1k vc_4 62 861 126 125 F 800 0.00 1415 reject_low 10 ALIGNMENT 0 YS2-19b11.q1k vc_5 896 863 5026 5025 C 34 0.00 1415 reject_low 16 ALIGNMENT 0 YS2-19b11.q1k vc_7 863 896 13562 13561 F 34 0.00 1415 reject_low 18 ALIGNMENT 40 YS2-19b11.q1k vc_2 862 822 2105 2145 C 41 97.56 1415 reject_low 13 ALIGNMENT 0 YS2-19b11.q1k vc_5 896 860 2 1 C 37 0.00 1415 reject_low 19 ALIGNMENT 216 YS2-19b11.q1k vc_1 862 1187 2531 2876 F 326 90.80 1415 reject_low 5 ALIGNMENT 0 YS2-19b11.q1k vc_5 62 861 2398 2397 F 800 0.00 1415 reject_low 8 ALIGNMENT 40 YS2-19b11.q1k vc_4 822 862 5831 5871 F 41 97.56 1415 reject_low 11 ALIGNMENT 41 YS2-19b11.q1k vc_7 1067 1017 6360 6411 C 51 94.12 1415|1,0 reject_low 20 ALIGNMENT 0 YS2-19b11.q1k vc_5 824 62 5063 5062 C 763 0.00 1415 reject_low 16 ALIGNMENT 66 YS2-19b11.q1k vc_4 946 862 1446 1534 C 85 94.12 1415 reject_low 15 ALIGNMENT 209 YS2-19b11.q1k vc_4 1191 862 5460 5812 C 330 90.00 1415 reject_low 9 ALIGNMENT 0 YS2-19b11.q1k vc_2 896 863 2106 2105 C 34 0.00 1415 reject_low 13 ALIGNMENT 0 YS2-19b11.q1k vc_3 821 62 2513 2512 C 760 0.00 1415 reject_low 14 ALIGNMENT 0 YS2-19b11.q1k vc_3 896 863 2473 2472 C 34 0.00 1415 reject_low 14 ALIGNMENT 285 YS2-19b11.q1k chr02 86 821 801169 801898 F 736 80.84 1415 reject_low 2 ALIGNMENT 753 YS2-19b11.p1k chr16 818 30 931974 932761 C 789 99.11 818 ambiguous_tel 0 ALIGNMENT 38 YS2-19b11.q1k vc_5 862 825 5025 5062 C 38 100.00 1415 reject_low 16 ALIGNMENT 0 YS2-19b11.q1k vc_7 62 824 63 62 F 763 0.00 1415 reject_low 17 ALIGNMENT 216 YS2-19b11.q1k vc_3 862 1187 2531 2876 F 326 90.80 1415 reject_low 7 ALIGNMENT 0 YS2-19b12.q1k vc_1 299 62 2513 2512 C 238 0.00 340 reject_low 2 ALIGNMENT 0 YS2-19b12.q1k vc_3 299 62 2513 2512 C 238 0.00 340 reject_low 3 ALIGNMENT 240 YS2-19b12.q1k chr01 39 300 33051 33312 F 262 97.71 340 accept_chi 0 ALIGNMENT 41 YS2-19b12.q1k vc_4 300 340 5831 5871 F 41 100.00 340 reject_low 4 ALIGNMENT 236 YS2-19b12.p1k chr01 291 29 33051 33312 C 263 97.34 310 accept_chi 1 ALIGNMENT 38 YS2-19b12.q1k vc_7 303 340 13525 13562 F 38 100.00 340 reject_low 6 ALIGNMENT 0 YS2-19b12.p1k chr01 310 292 33052 33051 C 19 0.00 310 accept_chi 1 ALIGNMENT 36 YS2-19b12.q1k vc_5 337 302 1 36 C 36 100.00 340 reject_low 7 ALIGNMENT 0 YS2-19b12.q1k chr01 301 340 33312 33311 F 40 0.00 340 accept_chi 0 ALIGNMENT 0 YS2-19b12.q1k vc_7 62 302 13525 13524 F 241 0.00 340 reject_low 6 ALIGNMENT 41 YS2-19b12.q1k vc_3 340 300 2472 2512 C 41 100.00 340 reject_low 3 ALIGNMENT 41 YS2-19b12.q1k vc_1 340 300 2472 2512 C 41 100.00 340 reject_low 2 ALIGNMENT 0 YS2-19b12.q1k vc_5 301 62 5064 5063 C 240 0.00 340 reject_low 5 ALIGNMENT 0 YS2-19b12.q1k vc_5 301 62 37 36 C 240 0.00 340 reject_low 7 ALIGNMENT 39 YS2-19b12.q1k vc_5 340 302 5025 5063 C 39 100.00 340 reject_low 5 ALIGNMENT 0 YS2-19b12.q1k vc_4 62 299 5831 5830 F 238 0.00 340 reject_low 4 ALIGNMENT 1029 YS2-19b13.q1k chr14 37 1181 239045 240199 F 1145 97.47 1410 accept 0 ALIGNMENT 937 YS2-19b13.p1k chr14 1088 35 240621 241690 C 1054 97.53 1281 accept 0 ALIGNMENT 301 YS2-19b14.q1k chr05 625 1082 289675 290144 F 458 90.17 1369 reject_low 1 ALIGNMENT 939 YS2-19b14.q1k chr06 38 1082 116664 117720 F 1045 97.70 1369 accept 0 ALIGNMENT 0 YS2-19b14.q1k chr05 62 624 289675 289674 F 563 0.00 1369 reject_low 1 ALIGNMENT 869 YS2-19b14.p1k chr06 1017 31 120257 121257 C 987 97.77 1268 accept 0 ALIGNMENT 1092 YS2-19b15.p1k chr07 1241 32 676651 677862 C 1210 96.78 1331 accept 0 ALIGNMENT 1072 YS2-19b15.q1k chr07 40 1235 675941 677144 F 1196 96.82 1465 accept 0 ALIGNMENT 1042 YS2-19b16.q1k chr02 1222 31 795107 796314 C 1192 96.22 1414 accept 0 ALIGNMENT 976 YS2-19b16.p1k chr02 37 1167 792081 793218 F 1131 96.91 1322 accept 0 ALIGNMENT 925 YS2-19b17.q1k chr08 1151 45 160940 162054 C 1107 95.57 1423 accept 0 ALIGNMENT 986 YS2-19b17.p1k chr08 34 1197 157017 158191 F 1164 96.31 1309 accept 0 ALIGNMENT 933 YS2-19b18.q1k chr15 44 1168 158455 159592 F 1125 95.29 1395 accept 0 ALIGNMENT 978 YS2-19b18.p1k chr15 1309 59 159440 160700 C 1251 93.45 1353 accept 0 ALIGNMENT 604 YS2-19b18.p1k chr13 1097 159 873404 874343 C 939 88.29 1353 reject_low 1 ALIGNMENT 0 YS2-19b18.p1k chr13 158 62 874344 874343 C 97 0.00 1353 reject_low 1 ALIGNMENT 1130 YS2-19b19.q1k chr15 1268 30 662350 663595 C 1239 97.74 1387 accept 0 ALIGNMENT 1018 YS2-19b19.p1k chr15 29 1204 658391 659582 F 1176 96.51 1283 accept 0 ALIGNMENT 604 YS2-19b20.q1k chr13 39 668 915706 916336 F 630 99.68 668 ambiguous_tel 0 ALIGNMENT 0 YS2-19b20.p1k chr13 703 685 915707 915706 C 19 0.00 703 ambiguous_tel 1 ALIGNMENT 578 YS2-19b20.p1k chr13 684 61 915706 916335 C 624 98.88 703 ambiguous_tel 1 ALIGNMENT 537 YS2-19b21.p1k chr12 967 127 463749 464582 C 841 88.94 1321 manual 2 ALIGNMENT 994 YS2-19b21.q1k chr09 47 1157 318548 319667 F 1111 97.66 1338 accept_chi 0 ALIGNMENT 537 YS2-19b21.p1k chr12 975 127 454605 455445 C 849 88.81 1321 manual 1 ALIGNMENT 931 YS2-19b22.p1k chr07 1199 58 918478 919635 C 1142 95.53 1266 accept 0 ALIGNMENT 1049 YS2-19b22.q1k chr07 30 1231 913891 915090 F 1202 96.34 1340 accept 0 ALIGNMENT 324 YS2-19b23.p1k chr12 712 85 463980 464592 C 628 85.99 1302 accept_chi 2 ALIGNMENT 731 YS2-19b23.q1k chr09 32 1028 318549 319546 F 997 92.48 1322 accept_chi 0 ALIGNMENT 324 YS2-19b23.p1k chr12 712 85 454843 455455 C 628 85.99 1302 accept_chi 1 ALIGNMENT 174 YS2-19c01.q1k chr04 33 533 1527337 1527835 F 501 78.84 1375 accept 0 ALIGNMENT 29 YS2-19c03.q1k chr05 271 237 4555 4589 C 35 94.29 1385 reject_low 10 ALIGNMENT 53 YS2-19c03.q1k chr12 460 404 3953 4009 C 57 98.25 1385 reject_low 17 ALIGNMENT 0 YS2-19c03.q1k chr08 680 911 558795 558794 F 232 0.00 1385 reject_low 12 ALIGNMENT 992 YS2-19c03.p1k chr15 1156 36 1089796 1090931 C 1121 96.97 1294 ambiguous_tel 2 ALIGNMENT 29 YS2-19c03.q1k chr02 605 573 4079 4111 C 33 96.97 1385 reject_low 16 ALIGNMENT 0 YS2-19c03.q1k chr13 911 680 3712 3711 C 232 0.00 1385 reject_low 15 ALIGNMENT 0 YS2-19c03.q1k chr05 286 272 4559 4554 C 15 0.00 1385 reject_low 10 ALIGNMENT 0 YS2-19c03.q1k chr08 626 606 3620 3609 C 21 0.00 1385 reject_low 14 ALIGNMENT 0 YS2-19c03.q1k chr12 403 62 9545 9544 C 342 0.00 1385 reject_low 13 ALIGNMENT 0 YS2-19c03.q1k chr06 522 461 2974 2989 C 62 0.00 1385 reject_low 18 ALIGNMENT 0 YS2-19c03.q1k chr12 911 680 9371 9370 C 232 0.00 1385 reject_low 13 ALIGNMENT 50 YS2-19c03.q1k chr08 627 679 558743 558795 F 53 98.11 1385 reject_low 12 ALIGNMENT 1008 YS2-19c03.q1k chr05 38 1184 572166 573326 F 1147 96.60 1385 ambiguous_tel 4 ALIGNMENT 0 YS2-19c03.q1k chr16 62 403 944168 944167 F 342 0.00 1385 reject_low 11 ALIGNMENT 0 YS2-19c03.q1k chr05 236 179 4590 4587 C 58 0.00 1385 reject_low 10 ALIGNMENT 0 YS2-19c03.q1k chr12 522 461 9472 9487 C 62 0.00 1385 reject_low 13 ALIGNMENT 29 YS2-19c03.q1k chr13 605 573 3754 3786 C 33 96.97 1385 reject_low 15 ALIGNMENT 24 YS2-19c03.q1k chr02 552 523 4108 4137 C 30 93.33 1385 reject_low 16 ALIGNMENT 50 YS2-19c03.q1k chr06 679 627 2872 2924 C 53 98.11 1385 reject_low 18 ALIGNMENT 1008 YS2-19c03.q1k chr14 1184 38 3565 4725 C 1147 96.60 1385 ambiguous_tel 3 ALIGNMENT 29 YS2-19c03.q1k chr16 573 605 944267 944299 F 33 96.97 1385 reject_low 11 ALIGNMENT 1008 YS2-19c03.q1k chr16 1184 38 3474 4634 C 1147 96.60 1385 ambiguous_tel 6 ALIGNMENT 0 YS2-19c03.q1k chr12 572 553 3911 3906 C 20 0.00 1385 reject_low 17 ALIGNMENT 29 YS2-19c03.q1k chr06 605 573 2915 2947 C 33 96.97 1385 reject_low 18 ALIGNMENT 0 YS2-19c03.q1k chr16 680 911 944342 944341 F 232 0.00 1385 reject_low 11 ALIGNMENT 0 YS2-19c03.q1k chr13 403 62 3886 3885 C 342 0.00 1385 reject_low 15 ALIGNMENT 989 YS2-19c03.q1k chr10 1184 38 3936 5097 C 1147 96.08 1385 ambiguous_tel 8 ALIGNMENT 127 YS2-19c03.q1k chr12 38 178 1066954 1067095 F 141 97.16 1385 reject_low 9 ALIGNMENT 989 YS2-19c03.p1k chr12 36 1156 6048 7183 F 1121 96.88 1294 reject_low 13 ALIGNMENT 0 YS2-19c03.q1k chr02 911 680 4037 4036 C 232 0.00 1385 reject_low 16 ALIGNMENT 24 YS2-19c03.q1k chr16 523 552 944241 944270 F 30 93.33 1385 reject_low 11 ALIGNMENT 768 YS2-19c03.q1k chr12 287 1184 1067125 1068035 F 898 95.88 1385 reject_low 9 ALIGNMENT 24 YS2-19c03.q1k chr13 552 523 3783 3812 C 30 93.33 1385 reject_low 15 ALIGNMENT 29 YS2-19c03.q1k chr12 605 573 9413 9445 C 33 96.97 1385 reject_low 13 ALIGNMENT 0 YS2-19c03.q1k chr13 572 553 3787 3782 C 20 0.00 1385 reject_low 15 ALIGNMENT 29 YS2-19c03.q1k chr08 573 605 558720 558752 F 33 96.97 1385 reject_low 12 ALIGNMENT 0 YS2-19c03.q1k chr12 626 606 9423 9412 C 21 0.00 1385 reject_low 13 ALIGNMENT 0 YS2-19c03.q1k chr16 461 522 944225 944240 F 62 0.00 1385 reject_low 11 ALIGNMENT 53 YS2-19c03.q1k chr08 404 460 558621 558677 F 57 98.25 1385 reject_low 12 ALIGNMENT 0 YS2-19c03.q1k chr12 522 461 3937 3952 C 62 0.00 1385 reject_low 17 ALIGNMENT 0 YS2-19c03.q1k chr06 911 680 2873 2872 C 232 0.00 1385 reject_low 18 ALIGNMENT 24 YS2-19c03.q1k chr08 523 552 558694 558723 F 30 93.33 1385 reject_low 12 ALIGNMENT 0 YS2-19c03.q1k chr02 626 606 4089 4078 C 21 0.00 1385 reject_low 16 ALIGNMENT 0 YS2-19c03.q1k chr16 553 572 944271 944266 F 20 0.00 1385 reject_low 11 ALIGNMENT 0 YS2-19c03.q1k chr12 179 236 1067096 1067093 F 58 0.00 1385 reject_low 9 ALIGNMENT 50 YS2-19c03.q1k chr12 679 627 3835 3887 C 53 98.11 1385 reject_low 17 ALIGNMENT 992 YS2-19c03.p1k chr12 1156 36 1076832 1077967 C 1121 96.97 1294 ambiguous_tel 1 ALIGNMENT 127 YS2-19c03.q1k chr05 178 38 4588 4729 C 141 97.16 1385 reject_low 10 ALIGNMENT 0 YS2-19c03.q1k chr06 626 606 2925 2914 C 21 0.00 1385 reject_low 18 ALIGNMENT 50 YS2-19c03.q1k chr12 679 627 9370 9422 C 53 98.11 1385 reject_low 13 ALIGNMENT 0 YS2-19c03.q1k chr08 911 680 3568 3567 C 232 0.00 1385 reject_low 14 ALIGNMENT 0 YS2-19c03.q1k chr02 403 62 4211 4210 C 342 0.00 1385 reject_low 16 ALIGNMENT 992 YS2-19c03.p1k chr12 1156 36 1070169 1071304 C 1121 96.97 1294 reject_low 9 ALIGNMENT 29 YS2-19c03.q1k chr12 237 271 1067094 1067128 F 35 94.29 1385 reject_low 9 ALIGNMENT 0 YS2-19c03.q1k chr08 572 553 3643 3638 C 20 0.00 1385 reject_low 14 ALIGNMENT 0 YS2-19c03.q1k chr02 522 461 4138 4153 C 62 0.00 1385 reject_low 16 ALIGNMENT 50 YS2-19c03.q1k chr02 679 627 4036 4088 C 53 98.11 1385 reject_low 16 ALIGNMENT 53 YS2-19c03.q1k chr06 460 404 2990 3046 C 57 98.25 1385 reject_low 18 ALIGNMENT 50 YS2-19c03.q1k chr08 679 627 3567 3619 C 53 98.11 1385 reject_low 14 ALIGNMENT 0 YS2-19c03.q1k chr12 403 62 4010 4009 C 342 0.00 1385 reject_low 17 ALIGNMENT 999 YS2-19c03.p1k chr16 36 1156 208 1340 F 1121 97.15 1294 ambiguous_tel 6 ALIGNMENT 1008 YS2-19c03.q1k chr07 38 1184 1086243 1087403 F 1147 96.60 1385 ambiguous_tel 5 ALIGNMENT 24 YS2-19c03.q1k chr12 552 523 3907 3936 C 30 93.33 1385 reject_low 17 ALIGNMENT 0 YS2-19c03.q1k chr13 522 461 3813 3828 C 62 0.00 1385 reject_low 15 ALIGNMENT 0 YS2-19c03.q1k chr08 403 62 3742 3741 C 342 0.00 1385 reject_low 14 ALIGNMENT 0 YS2-19c03.q1k chr02 572 553 4112 4107 C 20 0.00 1385 reject_low 16 ALIGNMENT 961 YS2-19c03.p1k chr10 38 1156 396 1526 F 1119 96.07 1294 ambiguous_tel 8 ALIGNMENT 29 YS2-19c03.q1k chr12 605 573 3878 3910 C 33 96.97 1385 reject_low 17 ALIGNMENT 0 YS2-19c03.q1k chr12 572 553 9446 9441 C 20 0.00 1385 reject_low 13 ALIGNMENT 0 YS2-19c03.q1k chr12 272 286 1067129 1067124 F 15 0.00 1385 reject_low 9 ALIGNMENT 0 YS2-19c03.p1k chr06 62 419 2 1 F 358 0.00 1294 reject_low 18 ALIGNMENT 1005 YS2-19c03.p1k chr14 36 1156 299 1431 F 1121 97.32 1294 ambiguous_tel 3 ALIGNMENT 0 YS2-19c03.q1k chr16 606 626 944300 944289 F 21 0.00 1385 reject_low 11 ALIGNMENT 989 YS2-19c03.p1k chr08 1156 36 560984 562119 C 1121 96.88 1294 reject_low 12 ALIGNMENT 53 YS2-19c03.q1k chr13 460 404 3829 3885 C 57 98.25 1385 reject_low 15 ALIGNMENT 0 YS2-19c03.q1k chr08 62 403 558621 558620 F 342 0.00 1385 reject_low 12 ALIGNMENT 962 YS2-19c03.p1k chr05 36 1156 192 1327 F 1121 96.07 1294 reject_low 10 ALIGNMENT 47 YS2-19c03.q1k chr13 679 627 3711 3763 C 53 96.23 1385 reject_low 15 ALIGNMENT 0 YS2-19c03.q1k chr08 461 522 558678 558693 F 62 0.00 1385 reject_low 12 ALIGNMENT 53 YS2-19c03.q1k chr12 460 404 9488 9544 C 57 98.25 1385 reject_low 13 ALIGNMENT 29 YS2-19c03.q1k chr08 605 573 3610 3642 C 33 96.97 1385 reject_low 14 ALIGNMENT 999 YS2-19c03.p1k chr16 1156 36 946637 947769 C 1121 97.15 1294 reject_low 11 ALIGNMENT 53 YS2-19c03.q1k chr02 460 404 4154 4210 C 57 98.25 1385 reject_low 16 ALIGNMENT 50 YS2-19c03.q1k chr16 627 679 944290 944342 F 53 98.11 1385 reject_low 11 ALIGNMENT 0 YS2-19c03.q1k chr08 522 461 3669 3684 C 62 0.00 1385 reject_low 14 ALIGNMENT 961 YS2-19c03.p1k chr09 38 1156 413 1543 F 1119 96.07 1294 ambiguous_tel 7 ALIGNMENT 999 YS2-19c03.p1k chr07 1156 36 1089537 1090669 C 1121 97.15 1294 ambiguous_tel 5 ALIGNMENT 53 YS2-19c03.q1k chr08 460 404 3685 3741 C 57 98.25 1385 reject_low 14 ALIGNMENT 989 YS2-19c03.q1k chr09 1184 38 3953 5114 C 1147 96.08 1385 ambiguous_tel 7 ALIGNMENT 0 YS2-19c03.q1k chr12 911 680 3836 3835 C 232 0.00 1385 reject_low 17 ALIGNMENT 0 YS2-19c03.q1k chr08 553 572 558724 558719 F 20 0.00 1385 reject_low 12 ALIGNMENT 53 YS2-19c03.q1k chr16 404 460 944168 944224 F 57 98.25 1385 reject_low 11 ALIGNMENT 0 YS2-19c03.q1k chr08 606 626 558753 558742 F 21 0.00 1385 reject_low 12 ALIGNMENT 1017 YS2-19c03.q1k chr15 38 1184 1086502 1087662 F 1147 96.86 1385 ambiguous_tel 2 ALIGNMENT 710 YS2-19c03.q1k chr05 1184 287 3629 4558 C 898 93.76 1385 reject_low 10 ALIGNMENT 0 YS2-19c03.q1k chr12 626 606 3888 3877 C 21 0.00 1385 reject_low 17 ALIGNMENT 0 YS2-19c03.q1k chr13 626 606 3764 3753 C 21 0.00 1385 reject_low 15 ALIGNMENT 24 YS2-19c03.q1k chr06 552 523 2944 2973 C 30 93.33 1385 reject_low 18 ALIGNMENT 1017 YS2-19c03.q1k chr04 38 1184 1527337 1528497 F 1147 96.86 1385 ambiguous_tel 0 ALIGNMENT 0 YS2-19c03.q1k chr06 403 62 3047 3046 C 342 0.00 1385 reject_low 18 ALIGNMENT 989 YS2-19c03.p1k chr13 36 1156 389 1524 F 1121 96.88 1294 reject_low 15 ALIGNMENT 986 YS2-19c03.p1k chr08 36 1156 373 1508 F 1121 96.79 1294 reject_low 14 ALIGNMENT 24 YS2-19c03.q1k chr08 552 523 3639 3668 C 30 93.33 1385 reject_low 14 ALIGNMENT 965 YS2-19c03.p1k chr02 36 1156 208 1343 F 1121 96.16 1294 reject_low 16 ALIGNMENT 992 YS2-19c03.p1k chr04 1156 36 1530631 1531766 C 1121 96.97 1294 ambiguous_tel 0 ALIGNMENT 0 YS2-19c03.q1k chr06 572 553 2948 2943 C 20 0.00 1385 reject_low 18 ALIGNMENT 962 YS2-19c03.p1k chr12 36 1156 411 1540 F 1121 96.34 1294 reject_low 17 ALIGNMENT 999 YS2-19c03.p1k chr05 1156 36 575460 576592 C 1121 97.15 1294 ambiguous_tel 4 ALIGNMENT 1017 YS2-19c03.q1k chr12 38 1184 1073538 1074698 F 1147 96.86 1385 ambiguous_tel 1 ALIGNMENT 640 YS2-19c03.p1k chr06 420 1156 2 750 F 737 96.47 1294 reject_low 18 ALIGNMENT 24 YS2-19c03.q1k chr12 552 523 9442 9471 C 30 93.33 1385 reject_low 13 ALIGNMENT 971 YS2-19c04.q1k chr11 1156 39 576463 577606 C 1118 96.78 1442 accept 0 ALIGNMENT 991 YS2-19c04.p1k chr11 35 1206 571985 573166 F 1172 95.56 1359 accept 0 ALIGNMENT 1030 YS2-19c05.p1k chr12 1150 36 463591 464710 C 1115 98.03 1309 accept_chi 1 ALIGNMENT 1030 YS2-19c05.p1k chr12 1150 36 454454 455573 C 1115 98.03 1309 accept_chi 0 ALIGNMENT 1002 YS2-19c05.q1k chr13 1175 40 36180 37329 C 1136 97.27 1378 accept_chi 2 ALIGNMENT 940 YS2-19c07.q1k chr02 1168 42 316084 317228 C 1127 96.63 1370 accept 0 ALIGNMENT 987 YS2-19c07.p1k chr02 29 1192 314948 316113 F 1164 95.88 1328 accept 0 ALIGNMENT 935 YS2-19c11.q1k chr03 38 1147 259037 260154 F 1110 96.22 1365 accept 0 ALIGNMENT 1003 YS2-19c11.p1k chr03 1348 39 259043 260334 C 1310 94.43 1348 accept 0 ALIGNMENT 984 YS2-19c12.q1k chr08 1113 40 49330 50407 C 1074 98.04 1395 accept 0 ALIGNMENT 955 YS2-19c12.p1k chr08 56 1154 45824 46936 F 1099 96.82 1351 accept 0 ALIGNMENT 0 YS2-19c13.q1k chr02 570 531 190821 190820 C 40 0.00 570 accept_chi 0 ALIGNMENT 0 YS2-19c13.q1k vc_5 531 62 37 36 C 470 0.00 570 reject_low 7 ALIGNMENT 0 YS2-19c13.q1k vc_7 62 532 13525 13524 F 471 0.00 570 reject_low 6 ALIGNMENT 0 YS2-19c13.q1k vc_3 529 62 2513 2512 C 468 0.00 570 reject_low 3 ALIGNMENT 38 YS2-19c13.q1k vc_7 533 570 13525 13562 F 38 100.00 570 reject_low 6 ALIGNMENT 36 YS2-19c13.q1k vc_5 567 532 1 36 C 36 100.00 570 reject_low 7 ALIGNMENT 0 YS2-19c13.q1k vc_4 62 529 5831 5830 F 468 0.00 570 reject_low 4 ALIGNMENT 0 YS2-19c13.q1k vc_1 529 62 2513 2512 C 468 0.00 570 reject_low 2 ALIGNMENT 41 YS2-19c13.q1k vc_1 570 530 2472 2512 C 41 100.00 570 reject_low 2 ALIGNMENT 39 YS2-19c13.q1k vc_5 570 532 5025 5063 C 39 100.00 570 reject_low 5 ALIGNMENT 465 YS2-19c13.p1k chr02 31 529 190820 191318 F 499 98.40 547 accept_chi 1 ALIGNMENT 476 YS2-19c13.q1k chr02 530 30 190820 191318 C 501 99.20 570 accept_chi 0 ALIGNMENT 0 YS2-19c13.q1k vc_5 531 62 5064 5063 C 470 0.00 570 reject_low 5 ALIGNMENT 0 YS2-19c13.p1k chr02 530 547 191318 191317 F 18 0.00 547 accept_chi 1 ALIGNMENT 41 YS2-19c13.q1k vc_3 570 530 2472 2512 C 41 100.00 570 reject_low 3 ALIGNMENT 41 YS2-19c13.q1k vc_4 530 570 5831 5871 F 41 100.00 570 reject_low 4 ALIGNMENT 919 YS2-19c14.q1k chr07 50 1076 441411 442444 F 1027 97.18 1368 accept 0 ALIGNMENT 1044 YS2-19c14.p1k chr07 1225 34 444819 446008 C 1192 96.90 1390 accept 0 ALIGNMENT 929 YS2-19c15.p1k chr16 30 1138 456217 457326 F 1109 96.66 1317 accept 0 ALIGNMENT 1009 YS2-19c15.q1k chr16 1250 46 457555 458781 C 1205 95.85 1379 accept 0 ALIGNMENT 139 YS2-19c16.q1k chr14 34 179 232453 232598 F 146 99.32 221 accept 0 ALIGNMENT 0 YS2-19c16.q1k vc_5 182 62 5064 5063 C 121 0.00 221 reject_low 4 ALIGNMENT 0 YS2-19c16.q1k vc_3 179 62 2514 2513 C 118 0.00 221 reject_low 2 ALIGNMENT 38 YS2-19c16.q1k vc_7 184 221 13525 13562 F 38 100.00 221 reject_low 5 ALIGNMENT 36 YS2-19c16.q1k vc_5 218 183 1 36 C 36 100.00 221 reject_low 6 ALIGNMENT 42 YS2-19c16.q1k vc_3 221 180 2472 2513 C 42 100.00 221 reject_low 2 ALIGNMENT 0 YS2-19c16.q1k vc_5 182 62 37 36 C 121 0.00 221 reject_low 6 ALIGNMENT 0 YS2-19c16.q1k vc_7 62 183 13525 13524 F 122 0.00 221 reject_low 5 ALIGNMENT 42 YS2-19c16.q1k vc_4 180 221 5830 5871 F 42 100.00 221 reject_low 3 ALIGNMENT 0 YS2-19c16.q1k chr14 180 221 232598 232597 F 42 0.00 221 accept 0 ALIGNMENT 42 YS2-19c16.q1k vc_1 221 180 2472 2513 C 42 100.00 221 reject_low 1 ALIGNMENT 39 YS2-19c16.q1k vc_5 221 183 5025 5063 C 39 100.00 221 reject_low 4 ALIGNMENT 0 YS2-19c16.q1k vc_1 179 62 2514 2513 C 118 0.00 221 reject_low 1 ALIGNMENT 0 YS2-19c16.q1k vc_4 62 179 5830 5829 F 118 0.00 221 reject_low 3 ALIGNMENT 36 YS2-19c17.q1k vc_5 327 292 1 36 C 36 100.00 330 reject_vc 5 ALIGNMENT 41 YS2-19c17.q1k vc_1 330 290 2472 2512 C 41 100.00 330 reject_vc 0 ALIGNMENT 41 YS2-19c17.q1k vc_4 290 330 5831 5871 F 41 100.00 330 reject_vc 2 ALIGNMENT 0 YS2-19c17.q1k vc_1 289 62 2513 2512 C 228 0.00 330 reject_vc 0 ALIGNMENT 0 YS2-19c17.q1k vc_3 289 62 2513 2512 C 228 0.00 330 reject_vc 1 ALIGNMENT 0 YS2-19c17.q1k vc_5 291 62 37 36 C 230 0.00 330 reject_vc 5 ALIGNMENT 39 YS2-19c17.q1k vc_5 330 292 5025 5063 C 39 100.00 330 reject_vc 3 ALIGNMENT 38 YS2-19c17.q1k vc_7 293 330 13525 13562 F 38 100.00 330 reject_vc 4 ALIGNMENT 0 YS2-19c17.q1k vc_7 62 292 13525 13524 F 231 0.00 330 reject_vc 4 ALIGNMENT 0 YS2-19c17.q1k vc_5 291 62 5064 5063 C 230 0.00 330 reject_vc 3 ALIGNMENT 0 YS2-19c17.q1k vc_4 62 289 5831 5830 F 228 0.00 330 reject_vc 2 ALIGNMENT 41 YS2-19c17.q1k vc_3 330 290 2472 2512 C 41 100.00 330 reject_vc 1 ALIGNMENT 983 YS2-19c18.p1k chr12 1204 67 780476 781622 C 1138 96.84 1335 accept 0 ALIGNMENT 1001 YS2-19c18.q1k chr12 26 1218 777250 778454 F 1193 95.98 1375 accept 0 ALIGNMENT 985 YS2-19c19.p1k chr02 1202 33 161184 162361 C 1170 95.98 1260 accept 0 ALIGNMENT 1034 YS2-19c19.q1k chr02 40 1180 157488 158622 F 1141 97.98 1358 accept 0 ALIGNMENT 967 YS2-19c20.p1k chr04 46 1217 1018696 1019887 F 1172 95.56 1315 accept 0 ALIGNMENT 1032 YS2-19c20.q1k chr04 1193 36 1020744 1021909 C 1158 97.32 1370 accept 0 ALIGNMENT 804 YS2-19c21.p1k chr12 62 1192 467014 468106 F 1131 93.10 1237 accept 1 ALIGNMENT 804 YS2-19c21.p1k chr12 62 1192 457877 458969 F 1131 93.10 1237 accept 0 ALIGNMENT 808 YS2-19c22.p1k chr04 43 1106 409325 410385 F 1064 93.98 1266 accept 0 ALIGNMENT 818 YS2-19c22.q1k chr04 1001 27 413141 414127 C 975 96.10 1251 accept 0 ALIGNMENT 942 YS2-19c23.p1k chr13 1144 31 919606 920710 C 1114 96.05 1198 reject_low 2 ALIGNMENT 988 YS2-19c23.p1k chr16 31 1144 10246 11359 F 1114 96.86 1198 ambiguous_tel 1 ALIGNMENT 988 YS2-19c23.p1k chr15 1144 31 1079783 1080896 C 1114 96.77 1198 ambiguous_tel 0 ALIGNMENT 978 YS2-19c24.p1k chr07 1200 65 826632 827790 C 1136 96.83 1229 accept 0 ALIGNMENT 531 YS2-19d01.p1k chr07 1014 65 274751 275693 C 950 86.53 1320 accept 0 ALIGNMENT 925 YS2-19d02.q1k chr07 40 1214 274328 275509 F 1175 95.06 1438 accept 0 ALIGNMENT 950 YS2-19d02.p1k chr07 1316 61 274445 275713 C 1256 93.79 1386 accept 0 ALIGNMENT 103 YS2-19d03.q1k chr15 35 239 575276 575480 F 205 84.39 1660 manual 0 ALIGNMENT 103 YS2-19d03.q1k chr04 35 239 1243398 1243602 F 205 84.39 1660 manual 1 ALIGNMENT 1003 YS2-19d03.p1k chr04 1141 33 1244057 1245179 C 1109 97.39 1308 manual 1 ALIGNMENT 1006 YS2-19d03.p1k chr15 1141 33 575935 577057 C 1109 97.48 1308 manual 0 ALIGNMENT 0 YS2-19d04.q1k vc_2 294 62 2146 2145 C 233 0.00 335 reject_low 3 ALIGNMENT 0 YS2-19d04.p1k chr07 291 308 190293 190292 F 18 0.00 308 accept_chi 0 ALIGNMENT 40 YS2-19d04.q1k vc_5 335 293 5025 5067 C 43 97.67 335 reject_low 6 ALIGNMENT 37 YS2-19d04.q1k vc_5 332 293 1 40 C 40 97.50 335 reject_low 8 ALIGNMENT 0 YS2-19d04.q1k vc_1 294 62 2513 2512 C 233 0.00 335 reject_low 2 ALIGNMENT 0 YS2-19d04.q1k vc_4 62 294 5831 5830 F 233 0.00 335 reject_low 5 ALIGNMENT 41 YS2-19d04.q1k vc_1 335 295 2472 2512 C 41 100.00 335 reject_low 2 ALIGNMENT 255 YS2-19d04.q1k chr07 296 33 190030 190293 C 264 99.62 335 accept_chi 1 ALIGNMENT 0 YS2-19d04.q1k vc_7 62 297 13525 13524 F 236 0.00 335 reject_low 7 ALIGNMENT 38 YS2-19d04.q1k vc_7 298 335 13525 13562 F 38 100.00 335 reject_low 7 ALIGNMENT 41 YS2-19d04.q1k vc_2 335 295 2105 2145 C 41 100.00 335 reject_low 3 ALIGNMENT 0 YS2-19d04.q1k vc_3 294 62 2513 2512 C 233 0.00 335 reject_low 4 ALIGNMENT 0 YS2-19d04.q1k vc_5 292 62 41 40 C 231 0.00 335 reject_low 8 ALIGNMENT 0 YS2-19d04.q1k chr07 335 297 190031 190030 C 39 0.00 335 accept_chi 1 ALIGNMENT 41 YS2-19d04.q1k vc_4 295 335 5831 5871 F 41 100.00 335 reject_low 5 ALIGNMENT 41 YS2-19d04.q1k vc_3 335 295 2472 2512 C 41 100.00 335 reject_low 4 ALIGNMENT 0 YS2-19d04.q1k vc_5 292 62 5068 5067 C 231 0.00 335 reject_low 6 ALIGNMENT 255 YS2-19d04.p1k chr07 27 290 190030 190293 F 264 99.62 308 accept_chi 0 ALIGNMENT 971 YS2-19d06.q1k chr01 1130 31 66295 67401 C 1100 96.55 1393 accept 0 ALIGNMENT 1005 YS2-19d06.p1k chr01 47 1248 64264 65471 F 1202 95.26 1404 accept 0 ALIGNMENT 890 YS2-19d07.p1k chr05 1178 30 305504 306647 C 1149 94.69 1334 accept 0 ALIGNMENT 960 YS2-19d07.q1k chr05 36 1168 301393 302545 F 1133 96.56 1433 accept 0 ALIGNMENT 39 YS2-19d08.q1k vc_5 322 284 5025 5063 C 39 100.00 322 reject_low 6 ALIGNMENT 42 YS2-19d08.q1k vc_4 281 322 5830 5871 F 42 100.00 322 reject_low 5 ALIGNMENT 0 YS2-19d08.q1k vc_1 280 62 2514 2513 C 219 0.00 322 reject_low 2 ALIGNMENT 42 YS2-19d08.q1k vc_2 322 281 2105 2146 C 42 100.00 322 reject_low 3 ALIGNMENT 227 YS2-19d08.p1k chr02 31 268 372137 372374 F 238 100.00 293 accept_chi 0 ALIGNMENT 0 YS2-19d08.q1k chr02 322 284 372138 372137 C 39 0.00 322 accept_chi 1 ALIGNMENT 0 YS2-19d08.q1k vc_3 280 62 2514 2513 C 219 0.00 322 reject_low 4 ALIGNMENT 42 YS2-19d08.q1k vc_1 322 281 2472 2513 C 42 100.00 322 reject_low 2 ALIGNMENT 0 YS2-19d08.q1k vc_5 283 62 37 36 C 222 0.00 322 reject_low 8 ALIGNMENT 42 YS2-19d08.q1k vc_3 322 281 2472 2513 C 42 100.00 322 reject_low 4 ALIGNMENT 0 YS2-19d08.q1k vc_5 283 62 5064 5063 C 222 0.00 322 reject_low 6 ALIGNMENT 36 YS2-19d08.q1k vc_5 319 284 1 36 C 36 100.00 322 reject_low 8 ALIGNMENT 227 YS2-19d08.q1k chr02 283 46 372137 372374 C 238 100.00 322 accept_chi 1 ALIGNMENT 0 YS2-19d08.q1k vc_7 62 284 13525 13524 F 223 0.00 322 reject_low 7 ALIGNMENT 0 YS2-19d08.q1k vc_4 62 280 5830 5829 F 219 0.00 322 reject_low 5 ALIGNMENT 0 YS2-19d08.q1k vc_2 280 62 2147 2146 C 219 0.00 322 reject_low 3 ALIGNMENT 38 YS2-19d08.q1k vc_7 285 322 13525 13562 F 38 100.00 322 reject_low 7 ALIGNMENT 0 YS2-19d08.p1k chr02 269 293 372374 372373 F 25 0.00 293 accept_chi 0 ALIGNMENT 915 YS2-19d10.p1k chr12 39 1131 454615 455692 F 1093 94.78 1497 accept 0 ALIGNMENT 705 YS2-19d10.q1k chr12 1112 31 467096 468153 C 1082 91.68 1360 accept 1 ALIGNMENT 915 YS2-19d10.p1k chr12 39 1131 463752 464829 F 1093 94.78 1497 accept 1 ALIGNMENT 705 YS2-19d10.q1k chr12 1112 31 457959 459016 C 1082 91.68 1360 accept 0 ALIGNMENT 1020 YS2-19d11.q1k chr09 41 1155 95086 96212 F 1115 98.03 1393 accept 0 ALIGNMENT 1066 YS2-19d11.p1k chr09 1246 28 98423 99646 C 1219 96.31 1373 accept 0 ALIGNMENT 297 YS2-19d11.p1k chr14 1147 579 493957 494524 C 569 84.18 1373 reject_low 1 ALIGNMENT 0 YS2-19d11.p1k chr14 578 62 494525 494524 C 517 0.00 1373 reject_low 1 ALIGNMENT 857 YS2-19d12.p1k chr16 35 1063 929943 930987 F 1029 95.63 1292 accept 0 ALIGNMENT 224 YS2-19d12.q1k chr02 799 473 801597 801923 C 327 89.91 1446 reject_low 1 ALIGNMENT 0 YS2-19d12.q1k chr02 472 62 801924 801923 C 411 0.00 1446 reject_low 1 ALIGNMENT 0 YS2-19d12.q1k chr02 935 800 801598 801597 C 136 0.00 1446 reject_low 1 ALIGNMENT 944 YS2-19d12.q1k chr16 1155 53 932091 933206 C 1103 96.28 1446 accept 0 ALIGNMENT 0 YS2-19d13.p1k vc_2 549 62 8802 8801 C 488 0.00 770 reject_vc 14 ALIGNMENT 0 YS2-19d13.p1k vc_1 549 62 9169 9168 C 488 0.00 770 reject_vc 13 ALIGNMENT 0 YS2-19d13.q1k vc_3 216 62 2513 2512 C 155 0.00 257 reject_low 9 ALIGNMENT 41 YS2-19d13.q1k vc_4 217 257 5831 5871 F 41 100.00 257 reject_low 10 ALIGNMENT 0 YS2-19d13.q1k vc_4 62 216 5831 5830 F 155 0.00 257 reject_low 10 ALIGNMENT 540 YS2-19d13.p1k vc_5 742 1 3912 4669 C 742 91.91 770 reject_vc 1 ALIGNMENT 537 YS2-19d13.p1k vc_1 742 1 992 1749 C 742 91.78 770 reject_vc 2 ALIGNMENT 0 YS2-19d13.q1k vc_1 216 62 2513 2512 C 155 0.00 257 reject_low 8 ALIGNMENT 0 YS2-19d13.q1k vc_7 62 219 13525 13524 F 158 0.00 257 reject_low 12 ALIGNMENT 55 YS2-19d13.p1k vc_3 742 550 8237 8439 C 193 78.76 770 reject_vc 15 ALIGNMENT 530 YS2-19d13.p1k vc_7 1 724 13918 14654 F 724 91.71 770 reject_vc 7 ALIGNMENT 39 YS2-19d13.q1k vc_5 257 219 5025 5063 C 39 100.00 257 reject_low 11 ALIGNMENT 38 YS2-19d13.q1k vc_7 220 257 13525 13562 F 38 100.00 257 reject_low 12 ALIGNMENT 537 YS2-19d13.p1k vc_3 742 1 992 1749 C 742 91.78 770 reject_vc 4 ALIGNMENT 539 YS2-19d13.p1k vc_6 1 724 3712 4448 F 724 92.13 770 reject_vc 5 ALIGNMENT 0 YS2-19d13.q1k chr07 217 257 624750 624749 F 41 0.00 257 accept 0 ALIGNMENT 537 YS2-19d13.p1k vc_2 742 1 992 1749 C 742 91.78 770 reject_vc 3 ALIGNMENT 0 YS2-19d13.q1k vc_5 218 62 37 36 C 157 0.00 257 reject_low 16 ALIGNMENT 36 YS2-19d13.q1k vc_5 254 219 1 36 C 36 100.00 257 reject_low 16 ALIGNMENT 531 YS2-19d13.p1k vc_7 1 742 456 1213 F 742 91.24 770 reject_vc 6 ALIGNMENT 41 YS2-19d13.q1k vc_3 257 217 2472 2512 C 41 100.00 257 reject_low 9 ALIGNMENT 41 YS2-19d13.q1k vc_1 257 217 2472 2512 C 41 100.00 257 reject_low 8 ALIGNMENT 55 YS2-19d13.p1k vc_1 742 550 8966 9168 C 193 78.76 770 reject_vc 13 ALIGNMENT 55 YS2-19d13.p1k vc_2 742 550 8599 8801 C 193 78.76 770 reject_vc 14 ALIGNMENT 178 YS2-19d13.q1k chr07 39 216 624573 624750 F 178 100.00 257 accept 0 ALIGNMENT 0 YS2-19d13.p1k vc_3 549 62 8440 8439 C 488 0.00 770 reject_vc 15 ALIGNMENT 0 YS2-19d13.q1k vc_5 218 62 5064 5063 C 157 0.00 257 reject_low 11 ALIGNMENT 598 YS2-19d15.q1k chr15 62 817 902772 903543 F 756 94.58 1189 accept 0 ALIGNMENT 967 YS2-19d15.p1k chr15 1102 36 907231 908303 C 1067 97.38 1331 accept 0 ALIGNMENT 934 YS2-19d17.p1k chr13 1066 25 18905 19961 C 1042 97.60 1283 accept 0 ALIGNMENT 960 YS2-19d17.q1k chr13 46 1152 13994 15109 F 1107 96.75 1386 accept 0 ALIGNMENT 0 YS2-19d19.q1k chr14 237 276 519312 519311 F 40 0.00 276 ambiguous_trans 0 ALIGNMENT 130 YS2-19d19.p1k chr04 29 177 645682 645830 F 149 97.99 254 reject_low 31 ALIGNMENT 0 YS2-19d19.q1k chr10 87 62 541342 541341 C 26 0.00 276 reject_low 24 ALIGNMENT 0 YS2-19d19.q1k chr10 87 62 355092 355091 C 26 0.00 276 reject_low 41 ALIGNMENT 0 YS2-19d19.q1k chr03 62 85 151516 151515 F 24 0.00 276 reject_low 46 ALIGNMENT 0 YS2-19d19.q1k chr06 62 87 143535 143534 F 26 0.00 276 reject_low 19 ALIGNMENT 0 YS2-19d19.q1k chr15 237 276 664962 664961 F 40 0.00 276 reject_low 12 ALIGNMENT 37 YS2-19d19.q1k chr06 155 236 137718 137799 F 82 84.15 276 reject_low 3 ALIGNMENT 139 YS2-19d19.q1k chr04 236 88 645682 645830 C 149 100.00 276 reject_low 17 ALIGNMENT 141 YS2-19d19.q1k chr02 86 236 9091 9241 F 151 100.00 276 reject_low 5 ALIGNMENT 0 YS2-19d19.q1k chr07 62 87 817079 817078 F 26 0.00 276 reject_low 20 ALIGNMENT 30 YS2-19d19.p1k chr06 110 29 137718 137799 C 82 81.71 254 reject_low 55 ALIGNMENT 61 YS2-19d19.q1k chr03 236 87 142928 143078 C 150 82.67 276 reject_low 47 ALIGNMENT 0 YS2-19d19.p1k chr06 254 111 137719 137718 C 144 0.00 254 reject_low 55 ALIGNMENT 0 YS2-19d19.p1k chr02 254 129 8900 8899 C 126 0.00 254 reject_low 56 ALIGNMENT 0 YS2-19d19.q1k chr10 120 62 537949 537948 C 59 0.00 276 reject_low 53 ALIGNMENT 0 YS2-19d19.p1k chr09 254 178 246218 246217 C 77 0.00 254 reject_low 37 ALIGNMENT 124 YS2-19d19.p1k chr01 29 177 166015 166163 F 149 96.64 254 reject_low 44 ALIGNMENT 127 YS2-19d19.p1k chr10 29 177 354943 355091 F 149 97.32 254 reject_low 42 ALIGNMENT 136 YS2-19d19.q1k chr10 236 88 354943 355091 C 149 99.33 276 reject_low 41 ALIGNMENT 0 YS2-19d19.q1k chr12 62 86 941188 941187 F 25 0.00 276 reject_low 11 ALIGNMENT 0 YS2-19d19.p1k chr07 254 180 811451 811450 C 75 0.00 254 reject_low 8 ALIGNMENT 130 YS2-19d19.p1k chr04 177 29 986792 986940 C 149 97.99 254 reject_low 33 ALIGNMENT 130 YS2-19d19.p1k chr03 177 29 90437 90585 C 149 97.99 254 reject_low 29 ALIGNMENT 130 YS2-19d19.p1k chr14 177 29 524730 524878 C 149 97.99 254 ambiguous_trans 0 ALIGNMENT 140 YS2-19d19.q1k chr12 87 236 941188 941337 F 150 100.00 276 reject_low 11 ALIGNMENT 40 YS2-19d19.q1k chr10 236 121 537834 537948 C 116 81.03 276 reject_low 53 ALIGNMENT 0 YS2-19d19.p1k chr08 178 254 389512 389511 F 77 0.00 254 reject_low 36 ALIGNMENT 139 YS2-19d19.q1k chr06 88 236 143535 143683 F 149 100.00 276 reject_low 19 ALIGNMENT 23 YS2-19d19.p1k chr02 128 29 8899 8998 C 100 78.00 254 reject_low 56 ALIGNMENT 0 YS2-19d19.q1k chr03 62 120 149513 149512 F 59 0.00 276 reject_low 45 ALIGNMENT 0 YS2-19d19.q1k chr03 276 237 168781 168780 C 40 0.00 276 reject_low 16 ALIGNMENT 0 YS2-19d19.q1k chr14 62 86 519163 519162 F 25 0.00 276 ambiguous_trans 0 ALIGNMENT 133 YS2-19d19.q1k chr01 236 88 166015 166163 C 149 98.66 276 ambiguous_trans 2 ALIGNMENT 0 YS2-19d19.q1k chr03 86 62 143079 143078 C 25 0.00 276 reject_low 47 ALIGNMENT 0 YS2-19d19.q1k chr10 276 237 541194 541193 C 40 0.00 276 reject_low 24 ALIGNMENT 0 YS2-19d19.q1k chr12 276 237 976438 976437 C 40 0.00 276 reject_low 26 ALIGNMENT 140 YS2-19d19.q1k chr14 87 236 519163 519312 F 150 100.00 276 ambiguous_trans 0 ALIGNMENT 130 YS2-19d19.p1k chr05 29 177 135791 135939 F 149 97.99 254 reject_low 34 ALIGNMENT 0 YS2-19d19.q1k chr09 62 87 246217 246216 F 26 0.00 276 reject_low 23 ALIGNMENT 141 YS2-19d19.q1k chr07 86 236 811450 811600 F 151 100.00 276 reject_low 6 ALIGNMENT 0 YS2-19d19.q1k chr10 62 141 204036 204035 F 80 0.00 276 reject_low 52 ALIGNMENT 139 YS2-19d19.q1k chr05 236 88 135791 135939 C 149 100.00 276 reject_low 18 ALIGNMENT 0 YS2-19d19.p1k chr10 254 124 204037 204036 C 131 0.00 254 reject_low 54 ALIGNMENT 0 YS2-19d19.q1k chr14 62 87 524730 524729 F 26 0.00 276 reject_low 27 ALIGNMENT 139 YS2-19d19.q1k chr06 88 236 137908 138056 F 149 100.00 276 ambiguous_trans 1 ALIGNMENT 0 YS2-19d19.q1k chr01 87 62 160576 160575 C 26 0.00 276 reject_low 43 ALIGNMENT 130 YS2-19d19.p1k chr12 29 177 731854 732002 F 149 97.99 254 reject_low 39 ALIGNMENT 124 YS2-19d19.p1k chr01 29 177 160427 160575 F 149 96.64 254 ambiguous_trans 2 ALIGNMENT 130 YS2-19d19.p1k chr10 29 177 541193 541341 F 149 97.99 254 reject_low 38 ALIGNMENT 0 YS2-19d19.q1k chr05 276 237 135792 135791 C 40 0.00 276 reject_low 18 ALIGNMENT 140 YS2-19d19.q1k chr15 87 236 664813 664962 F 150 100.00 276 reject_low 12 ALIGNMENT 0 YS2-19d19.q1k chr06 62 87 137908 137907 F 26 0.00 276 ambiguous_trans 1 ALIGNMENT 54 YS2-19d19.p1k chr03 29 177 124313 124462 F 149 81.21 254 reject_low 50 ALIGNMENT 139 YS2-19d19.q1k chr14 236 88 562217 562365 C 149 100.00 276 reject_low 28 ALIGNMENT 139 YS2-19d19.q1k chr14 88 236 524730 524878 F 149 100.00 276 reject_low 27 ALIGNMENT 130 YS2-19d19.p1k chr12 178 29 941188 941337 C 150 98.00 254 reject_low 13 ALIGNMENT 0 YS2-19d19.q1k chr04 87 62 645831 645830 C 26 0.00 276 reject_low 17 ALIGNMENT 130 YS2-19d19.p1k chr06 177 29 137908 138056 C 149 97.99 254 reject_low 3 ALIGNMENT 0 YS2-19d19.q1k chr15 62 86 664813 664812 F 25 0.00 276 reject_low 12 ALIGNMENT 0 YS2-19d19.q1k chr02 62 136 8899 8898 F 75 0.00 276 reject_low 4 ALIGNMENT 0 YS2-19d19.q1k chr06 237 276 138056 138055 F 40 0.00 276 ambiguous_trans 1 ALIGNMENT 140 YS2-19d19.q1k chr10 87 236 538016 538165 F 150 100.00 276 reject_low 10 ALIGNMENT 0 YS2-19d19.p1k chr06 254 178 143536 143535 C 77 0.00 254 ambiguous_trans 1 ALIGNMENT 63 YS2-19d19.q1k chr03 86 236 151516 151666 F 151 83.44 276 reject_low 46 ALIGNMENT 0 YS2-19d19.p1k chr03 254 145 149514 149513 C 110 0.00 254 reject_low 51 ALIGNMENT 0 YS2-19d19.p1k chr10 178 254 355091 355090 F 77 0.00 254 reject_low 42 ALIGNMENT 139 YS2-19d19.q1k chr10 236 88 541193 541341 C 149 100.00 276 reject_low 24 ALIGNMENT 0 YS2-19d19.q1k chr01 276 237 160428 160427 C 40 0.00 276 reject_low 43 ALIGNMENT 0 YS2-19d19.q1k chr05 87 62 135940 135939 C 26 0.00 276 reject_low 18 ALIGNMENT 0 YS2-19d19.q1k chr08 87 62 92096 92095 C 26 0.00 276 reject_low 21 ALIGNMENT 54 YS2-19d19.p1k chr03 29 178 142928 143078 F 150 81.33 254 reject_low 49 ALIGNMENT 139 YS2-19d19.q1k chr03 236 88 168780 168928 C 149 100.00 276 reject_low 16 ALIGNMENT 38 YS2-19d19.p1k chr10 123 29 204036 204131 C 95 83.16 254 reject_low 54 ALIGNMENT 0 YS2-19d19.q1k chr07 62 85 811450 811449 F 24 0.00 276 reject_low 6 ALIGNMENT 0 YS2-19d19.p1k chr10 180 254 204037 204036 F 75 0.00 254 reject_low 9 ALIGNMENT 0 YS2-19d19.q1k chr03 87 62 168929 168928 C 26 0.00 276 reject_low 16 ALIGNMENT 0 YS2-19d19.p1k chr14 254 179 519164 519163 C 76 0.00 254 reject_low 14 ALIGNMENT 0 YS2-19d19.p1k chr10 178 254 541341 541340 F 77 0.00 254 reject_low 38 ALIGNMENT 0 YS2-19d19.p1k chr12 254 179 941189 941188 C 76 0.00 254 reject_low 13 ALIGNMENT 0 YS2-19d19.q1k chr01 87 62 166164 166163 C 26 0.00 276 ambiguous_trans 2 ALIGNMENT 131 YS2-19d19.p1k chr07 179 29 811450 811600 C 151 98.01 254 reject_low 8 ALIGNMENT 0 YS2-19d19.q1k chr03 237 276 151666 151665 F 40 0.00 276 reject_low 46 ALIGNMENT 0 YS2-19d19.q1k chr14 276 237 562218 562217 C 40 0.00 276 reject_low 28 ALIGNMENT 0 YS2-19d19.p1k chr15 178 254 704396 704395 F 77 0.00 254 reject_low 40 ALIGNMENT 0 YS2-19d19.q1k chr10 276 237 203888 203887 C 40 0.00 276 reject_low 7 ALIGNMENT 0 YS2-19d19.q1k chr02 237 276 8998 8997 F 40 0.00 276 reject_low 4 ALIGNMENT 0 YS2-19d19.p1k chr15 254 179 664814 664813 C 76 0.00 254 reject_low 15 ALIGNMENT 0 YS2-19d19.q1k chr03 87 62 124463 124462 C 26 0.00 276 reject_low 48 ALIGNMENT 0 YS2-19d19.q1k chr12 237 276 941337 941336 F 40 0.00 276 reject_low 11 ALIGNMENT 0 YS2-19d19.p1k chr04 254 178 871817 871816 C 77 0.00 254 reject_low 32 ALIGNMENT 130 YS2-19d19.p1k chr04 177 29 871816 871964 C 149 97.99 254 reject_low 32 ALIGNMENT 0 YS2-19d19.q1k chr03 276 237 124314 124313 C 40 0.00 276 reject_low 48 ALIGNMENT 56 YS2-19d19.p1k chr03 179 29 151516 151666 C 151 82.12 254 reject_low 45 ALIGNMENT 0 YS2-19d19.p1k chr04 178 254 645830 645829 F 77 0.00 254 reject_low 31 ALIGNMENT 0 YS2-19d19.p1k chr03 254 180 151517 151516 C 75 0.00 254 reject_low 45 ALIGNMENT 0 YS2-19d19.p1k chr05 178 254 135939 135938 F 77 0.00 254 reject_low 34 ALIGNMENT 0 YS2-19d19.q1k chr03 276 237 142929 142928 C 40 0.00 276 reject_low 47 ALIGNMENT 139 YS2-19d19.q1k chr08 236 88 91947 92095 C 149 100.00 276 reject_low 21 ALIGNMENT 139 YS2-19d19.q1k chr07 88 236 817079 817227 F 149 100.00 276 reject_low 20 ALIGNMENT 0 YS2-19d19.q1k chr07 237 276 817227 817226 F 40 0.00 276 reject_low 20 ALIGNMENT 0 YS2-19d19.p1k chr06 254 178 137909 137908 C 77 0.00 254 reject_low 3 ALIGNMENT 0 YS2-19d19.q1k chr10 62 86 538016 538015 F 25 0.00 276 reject_low 10 ALIGNMENT 130 YS2-19d19.p1k chr03 29 177 168780 168928 F 149 97.99 254 reject_low 30 ALIGNMENT 0 YS2-19d19.q1k chr10 276 237 537835 537834 C 40 0.00 276 reject_low 53 ALIGNMENT 139 YS2-19d19.q1k chr08 236 88 389364 389512 C 149 100.00 276 reject_low 22 ALIGNMENT 141 YS2-19d19.q1k chr10 236 86 203887 204037 C 151 100.00 276 reject_low 7 ALIGNMENT 0 YS2-19d19.q1k chr01 276 237 166016 166015 C 40 0.00 276 ambiguous_trans 2 ALIGNMENT 0 YS2-19d19.q1k chr12 87 62 976586 976585 C 26 0.00 276 reject_low 26 ALIGNMENT 0 YS2-19d19.p1k chr04 254 178 986793 986792 C 77 0.00 254 reject_low 33 ALIGNMENT 0 YS2-19d19.q1k chr03 237 276 149628 149627 F 40 0.00 276 reject_low 45 ALIGNMENT 0 YS2-19d19.p1k chr03 178 254 124462 124461 F 77 0.00 254 reject_low 50 ALIGNMENT 0 YS2-19d19.p1k chr01 178 254 166163 166162 F 77 0.00 254 reject_low 44 ALIGNMENT 0 YS2-19d19.q1k chr02 237 276 9241 9240 F 40 0.00 276 reject_low 5 ALIGNMENT 0 YS2-19d19.q1k chr02 62 85 9091 9090 F 24 0.00 276 reject_low 5 ALIGNMENT 0 YS2-19d19.q1k chr14 237 276 524878 524877 F 40 0.00 276 reject_low 27 ALIGNMENT 130 YS2-19d19.p1k chr15 29 177 704248 704396 F 149 97.99 254 reject_low 40 ALIGNMENT 133 YS2-19d19.q1k chr01 236 88 160427 160575 C 149 98.66 276 reject_low 43 ALIGNMENT 139 YS2-19d19.q1k chr09 88 236 246217 246365 F 149 100.00 276 reject_low 23 ALIGNMENT 139 YS2-19d19.q1k chr12 236 88 731854 732002 C 149 100.00 276 reject_low 25 ALIGNMENT 0 YS2-19d19.q1k chr06 237 276 137799 137798 F 40 0.00 276 reject_low 3 ALIGNMENT 0 YS2-19d19.q1k chr10 276 237 354944 354943 C 40 0.00 276 reject_low 41 ALIGNMENT 130 YS2-19d19.p1k chr09 177 29 246217 246365 C 149 97.99 254 reject_low 37 ALIGNMENT 0 YS2-19d19.q1k chr14 87 62 562366 562365 C 26 0.00 276 reject_low 28 ALIGNMENT 60 YS2-19d19.q1k chr03 236 88 124313 124462 C 149 82.55 276 reject_low 48 ALIGNMENT 130 YS2-19d19.p1k chr15 178 29 664813 664962 C 150 98.00 254 reject_low 15 ALIGNMENT 27 YS2-19d19.q1k chr02 137 236 8899 8998 F 100 79.00 276 reject_low 4 ALIGNMENT 0 YS2-19d19.q1k chr12 87 62 732003 732002 C 26 0.00 276 reject_low 25 ALIGNMENT 130 YS2-19d19.p1k chr06 177 29 143535 143683 C 149 97.99 254 ambiguous_trans 1 ALIGNMENT 0 YS2-19d19.q1k chr04 276 237 645683 645682 C 40 0.00 276 reject_low 17 ALIGNMENT 0 YS2-19d19.p1k chr14 254 178 524731 524730 C 77 0.00 254 ambiguous_trans 0 ALIGNMENT 0 YS2-19d19.p1k chr03 254 178 90438 90437 C 77 0.00 254 reject_low 29 ALIGNMENT 0 YS2-19d19.q1k chr06 237 276 143683 143682 F 40 0.00 276 reject_low 19 ALIGNMENT 0 YS2-19d19.p1k chr01 178 254 160575 160574 F 77 0.00 254 ambiguous_trans 2 ALIGNMENT 0 YS2-19d19.q1k chr12 276 237 731855 731854 C 40 0.00 276 reject_low 25 ALIGNMENT 0 YS2-19d19.p1k chr03 178 254 168928 168927 F 77 0.00 254 reject_low 30 ALIGNMENT 130 YS2-19d19.p1k chr08 29 177 91947 92095 F 149 97.99 254 reject_low 35 ALIGNMENT 45 YS2-19d19.q1k chr10 142 236 204036 204131 F 95 85.26 276 reject_low 52 ALIGNMENT 130 YS2-19d19.p1k chr14 178 29 519163 519312 C 150 98.00 254 reject_low 14 ALIGNMENT 0 YS2-19d19.q1k chr08 276 237 389365 389364 C 40 0.00 276 reject_low 22 ALIGNMENT 0 YS2-19d19.p1k chr02 254 180 9092 9091 C 75 0.00 254 reject_low 4 ALIGNMENT 0 YS2-19d19.q1k chr08 87 62 389513 389512 C 26 0.00 276 reject_low 22 ALIGNMENT 0 YS2-19d19.q1k chr09 237 276 246365 246364 F 40 0.00 276 reject_low 23 ALIGNMENT 0 YS2-19d19.q1k chr07 237 276 811600 811599 F 40 0.00 276 reject_low 6 ALIGNMENT 139 YS2-19d19.q1k chr12 236 88 976437 976585 C 149 100.00 276 reject_low 26 ALIGNMENT 131 YS2-19d19.p1k chr10 29 179 203887 204037 F 151 98.01 254 reject_low 9 ALIGNMENT 0 YS2-19d19.p1k chr12 178 254 732002 732001 F 77 0.00 254 reject_low 39 ALIGNMENT 0 YS2-19d19.q1k chr08 276 237 91948 91947 C 40 0.00 276 reject_low 21 ALIGNMENT 41 YS2-19d19.p1k chr03 144 29 149513 149628 C 116 81.03 254 reject_low 51 ALIGNMENT 0 YS2-19d19.q1k chr10 85 62 204038 204037 C 24 0.00 276 reject_low 7 ALIGNMENT 0 YS2-19d19.q1k chr10 237 276 204131 204130 F 40 0.00 276 reject_low 52 ALIGNMENT 45 YS2-19d19.q1k chr03 121 236 149513 149628 F 116 81.90 276 reject_low 45 ALIGNMENT 130 YS2-19d19.p1k chr08 29 177 389364 389512 F 149 97.99 254 reject_low 36 ALIGNMENT 0 YS2-19d19.q1k chr06 62 154 137718 137717 F 93 0.00 276 reject_low 3 ALIGNMENT 131 YS2-19d19.p1k chr02 179 29 9091 9241 C 151 98.01 254 reject_low 4 ALIGNMENT 0 YS2-19d19.q1k chr10 237 276 538165 538164 F 40 0.00 276 reject_low 10 ALIGNMENT 0 YS2-19d19.p1k chr08 178 254 92095 92094 F 77 0.00 254 reject_low 35 ALIGNMENT 0 YS2-19d19.p1k chr03 179 254 143078 143077 F 76 0.00 254 reject_low 49 ALIGNMENT 0 YS2-19d20.q1k chr07 122 699 9581 9580 F 578 0.00 1333 reject_low 1 ALIGNMENT 906 YS2-19d20.q1k chr09 1131 101 430363 431400 C 1031 96.12 1333 accept 0 ALIGNMENT 108 YS2-19d20.q1k chr07 700 937 9581 9817 F 238 82.35 1333 reject_low 1 ALIGNMENT 877 YS2-19d20.p1k chr09 33 1094 426233 427312 F 1062 95.86 1289 accept 0 ALIGNMENT 896 YS2-19d21.q1k chr01 1154 82 167206 168283 C 1073 95.06 1270 accept_trans 0 ALIGNMENT 930 YS2-19d21.p1k chr01 35 1067 157746 158796 F 1033 98.06 1216 accept_trans 0 ALIGNMENT 617 YS2-19d22.p1k chr16 987 91 4139 5022 C 897 90.86 1283 reject_low 8 ALIGNMENT 0 YS2-19d22.p1k chr08 244 493 558619 558618 F 250 0.00 1283 reject_low 18 ALIGNMENT 0 YS2-19d22.p1k chr02 493 244 4213 4212 C 250 0.00 1283 reject_low 16 ALIGNMENT 130 YS2-19d22.p1k chr08 243 91 3743 3895 C 153 95.42 1283 reject_low 17 ALIGNMENT 0 YS2-19d22.p1k chr12 493 244 9547 9546 C 250 0.00 1283 reject_low 12 ALIGNMENT 109 YS2-19d22.p1k chr05 987 733 4313 4555 C 255 84.71 1283 reject_low 9 ALIGNMENT 0 YS2-19d22.p1k chr05 732 624 4556 4585 C 109 0.00 1283 reject_low 9 ALIGNMENT 0 YS2-19d22.p1k chr16 244 493 944166 944165 F 250 0.00 1283 reject_low 14 ALIGNMENT 130 YS2-19d22.p1k chr02 243 91 4212 4364 C 153 95.42 1283 reject_low 16 ALIGNMENT 133 YS2-19d22.p1k chr12 243 91 9546 9698 C 153 96.08 1283 reject_low 12 ALIGNMENT 133 YS2-19d22.p1k chr12 243 91 4011 4163 C 153 96.08 1283 reject_low 11 ALIGNMENT 632 YS2-19d22.p1k chr15 91 987 1086114 1086997 F 897 91.42 1283 reject_low 4 ALIGNMENT 131 YS2-19d22.p1k chr06 241 91 3050 3200 C 151 96.03 1283 reject_low 15 ALIGNMENT 0 YS2-19d22.p1k chr12 493 244 4012 4011 C 250 0.00 1283 reject_low 11 ALIGNMENT 0 YS2-19d22.p1k chr13 493 244 3888 3887 C 250 0.00 1283 reject_low 13 ALIGNMENT 133 YS2-19d22.p1k chr16 91 243 944014 944166 F 153 96.08 1283 reject_low 14 ALIGNMENT 130 YS2-19d22.p1k chr08 91 243 558467 558619 F 153 95.42 1283 reject_low 18 ALIGNMENT 617 YS2-19d22.p1k chr05 91 987 571778 572661 F 897 90.86 1283 reject_low 5 ALIGNMENT 660 YS2-19d22.p1k chr10 1024 91 4567 5485 C 934 91.65 1283 ambiguous_tel 1 ALIGNMENT 464 YS2-19d22.p1k chr05 623 97 4586 5111 C 527 96.39 1283 reject_low 9 ALIGNMENT 660 YS2-19d22.p1k chr09 1024 91 4584 5502 C 934 91.65 1283 ambiguous_tel 0 ALIGNMENT 632 YS2-19d22.p1k chr04 91 987 1526949 1527832 F 897 91.42 1283 reject_low 2 ALIGNMENT 108 YS2-19d22.p1k chr12 733 987 1067128 1067370 F 255 84.71 1283 reject_low 10 ALIGNMENT 133 YS2-19d22.p1k chr13 243 91 3887 4039 C 153 96.08 1283 reject_low 13 ALIGNMENT 617 YS2-19d22.p1k chr14 987 91 4230 5113 C 897 90.86 1283 reject_low 7 ALIGNMENT 0 YS2-19d22.p1k chr08 493 244 3744 3743 C 250 0.00 1283 reject_low 17 ALIGNMENT 0 YS2-19d22.p1k chr06 493 242 3051 3050 C 252 0.00 1283 reject_low 15 ALIGNMENT 617 YS2-19d22.p1k chr07 91 987 1085855 1086738 F 897 90.86 1283 reject_low 6 ALIGNMENT 0 YS2-19d22.p1k chr12 624 732 1067098 1067127 F 109 0.00 1283 reject_low 10 ALIGNMENT 464 YS2-19d22.p1k chr12 97 623 1066572 1067097 F 527 96.39 1283 reject_low 10 ALIGNMENT 632 YS2-19d22.p1k chr12 91 987 1073150 1074033 F 897 91.42 1283 reject_low 3 ALIGNMENT 1046 YS2-19d23.p1k chr12 1252 59 463457 464646 C 1194 96.48 1257 reject_bad_break 0 ALIGNMENT 306 YS2-19d23.q1k chr12 103 518 460264 460691 F 416 92.31 1177 reject_bad_break 0 ALIGNMENT 144 YS2-19d23.q1k chr12 855 1165 461052 461376 F 311 83.60 1177 reject_bad_break 0 ALIGNMENT 144 YS2-19d23.q1k chr12 384 1082 451419 452157 F 699 76.39 1177 reject_low 1 ALIGNMENT 0 YS2-19d23.q1k chr12 519 854 460692 461051 F 336 0.00 1177 reject_bad_break 0 ALIGNMENT 0 YS2-19d23.q1k chr12 122 383 451419 451418 F 262 0.00 1177 reject_low 1 ALIGNMENT 1046 YS2-19d23.p1k chr12 1252 59 454320 455509 C 1194 96.48 1257 reject_low 1 ALIGNMENT 1006 YS2-19e01.q1k chr16 1137 30 832913 834022 C 1108 98.01 1411 accept 0 ALIGNMENT 21 YS2-19e01.p1k chr16 66 112 252250 252295 F 47 91.49 1296 reject_low 1 ALIGNMENT 984 YS2-19e01.p1k chr16 35 1250 827477 828700 F 1216 94.98 1296 accept 0 ALIGNMENT 0 YS2-19e01.p1k chr16 113 855 252295 252294 F 743 0.00 1296 reject_low 1 ALIGNMENT 930 YS2-19e02.p1k chr02 32 1137 678652 679769 F 1106 95.93 1287 accept 0 ALIGNMENT 946 YS2-19e02.q1k chr02 1140 31 680469 681593 C 1110 96.49 1343 accept 0 ALIGNMENT 923 YS2-19e03.p1k chr04 27 1087 965335 966409 F 1061 97.27 1265 accept 0 ALIGNMENT 1073 YS2-19e03.q1k chr04 1290 41 968880 970137 C 1250 95.28 1448 accept 0 ALIGNMENT 40 YS2-19e04.q1k vc_5 283 241 5025 5067 C 43 97.67 283 reject_low 6 ALIGNMENT 41 YS2-19e04.q1k vc_2 283 243 2105 2145 C 41 100.00 283 reject_low 3 ALIGNMENT 0 YS2-19e04.q1k chr04 283 244 469326 469325 C 40 0.00 283 accept_chi 0 ALIGNMENT 41 YS2-19e04.q1k vc_3 283 243 2472 2512 C 41 100.00 283 reject_low 4 ALIGNMENT 0 YS2-19e04.p1k chr04 259 276 469529 469528 F 18 0.00 276 accept_chi 1 ALIGNMENT 190 YS2-19e04.p1k chr04 62 258 469333 469529 F 197 100.00 276 accept_chi 1 ALIGNMENT 41 YS2-19e04.q1k vc_1 283 243 2472 2512 C 41 100.00 283 reject_low 2 ALIGNMENT 0 YS2-19e04.q1k vc_2 242 62 2146 2145 C 181 0.00 283 reject_low 3 ALIGNMENT 197 YS2-19e04.q1k chr04 243 39 469325 469529 C 205 100.00 283 accept_chi 0 ALIGNMENT 38 YS2-19e04.q1k vc_7 246 283 13525 13562 F 38 100.00 283 reject_low 7 ALIGNMENT 41 YS2-19e04.q1k vc_4 243 283 5831 5871 F 41 100.00 283 reject_low 5 ALIGNMENT 0 YS2-19e04.q1k vc_4 62 242 5831 5830 F 181 0.00 283 reject_low 5 ALIGNMENT 0 YS2-19e04.q1k vc_5 240 62 41 40 C 179 0.00 283 reject_low 8 ALIGNMENT 0 YS2-19e04.q1k vc_5 240 62 5068 5067 C 179 0.00 283 reject_low 6 ALIGNMENT 0 YS2-19e04.q1k vc_1 242 62 2513 2512 C 181 0.00 283 reject_low 2 ALIGNMENT 37 YS2-19e04.q1k vc_5 280 241 1 40 C 40 97.50 283 reject_low 8 ALIGNMENT 0 YS2-19e04.q1k vc_7 62 245 13525 13524 F 184 0.00 283 reject_low 7 ALIGNMENT 0 YS2-19e04.q1k vc_3 242 62 2513 2512 C 181 0.00 283 reject_low 4 ALIGNMENT 1014 YS2-19e05.p1k chr07 39 1184 97510 98662 F 1146 96.51 1330 accept 0 ALIGNMENT 998 YS2-19e05.q1k chr07 1186 40 101462 102619 C 1147 97.30 1397 accept 0 ALIGNMENT 0 YS2-19e06.p1k chr12 534 834 170705 170704 F 301 0.00 1361 reject_low 5 ALIGNMENT 0 YS2-19e06.p1k chr12 545 834 829438 829437 F 290 0.00 1361 reject_low 3 ALIGNMENT 0 YS2-19e06.q1k chr04 399 886 310004 310003 F 488 0.00 1469 reject_low 7 ALIGNMENT 36 YS2-19e06.q1k chr12 234 193 806784 806825 C 42 95.24 1469 reject_low 2 ALIGNMENT 36 YS2-19e06.q1k chr04 200 251 309809 309860 F 52 90.38 1469 reject_low 7 ALIGNMENT 23 YS2-19e06.q1k chr04 350 398 309956 310004 F 49 83.67 1469 reject_low 7 ALIGNMENT 0 YS2-19e06.q1k chr12 192 62 806826 806825 C 131 0.00 1469 reject_low 2 ALIGNMENT 21 YS2-19e06.p1k chr04 501 530 1321964 1321993 F 30 96.67 1361 reject_low 4 ALIGNMENT 0 YS2-19e06.p1k chr12 504 62 170709 170708 C 443 0.00 1361 reject_low 6 ALIGNMENT 20 YS2-19e06.p1k chr12 533 505 170680 170708 C 29 100.00 1361 reject_low 6 ALIGNMENT 0 YS2-19e06.q1k chr12 886 235 806785 806784 C 652 0.00 1469 reject_low 2 ALIGNMENT 897 YS2-19e06.p1k chr04 30 1164 226337 227505 F 1135 93.66 1361 accept 0 ALIGNMENT 0 YS2-19e06.q1k chr04 62 199 309809 309808 F 138 0.00 1469 reject_low 7 ALIGNMENT 78 YS2-19e06.q1k chr15 316 193 254492 254615 C 124 87.90 1469 reject_low 1 ALIGNMENT 0 YS2-19e06.p1k chr12 62 504 170677 170676 F 443 0.00 1361 reject_low 5 ALIGNMENT 0 YS2-19e06.q1k chr15 192 62 254616 254615 C 131 0.00 1469 reject_low 1 ALIGNMENT 0 YS2-19e06.p1k chr04 531 834 1321993 1321992 F 304 0.00 1361 reject_low 4 ALIGNMENT 22 YS2-19e06.p1k chr12 498 544 829392 829438 F 47 87.23 1361 reject_low 3 ALIGNMENT 986 YS2-19e06.q1k chr04 1179 28 229536 230693 C 1152 95.92 1469 accept 0 ALIGNMENT 20 YS2-19e06.p1k chr12 505 533 170677 170705 F 29 100.00 1361 reject_low 5 ALIGNMENT 0 YS2-19e06.p1k chr12 834 534 170681 170680 C 301 0.00 1361 reject_low 6 ALIGNMENT 0 YS2-19e06.q1k chr15 886 317 254493 254492 C 570 0.00 1469 reject_low 1 ALIGNMENT 0 YS2-19e06.p1k chr04 62 500 1321964 1321963 F 439 0.00 1361 reject_low 4 ALIGNMENT 0 YS2-19e06.q1k chr04 252 349 309861 309955 F 98 0.00 1469 reject_low 7 ALIGNMENT 0 YS2-19e06.p1k chr12 62 497 829392 829391 F 436 0.00 1361 reject_low 3 ALIGNMENT 644 YS2-19e07.q1k chr12 297 1082 980106 980905 F 786 95.93 1325 reject_low 4 ALIGNMENT 0 YS2-19e07.q1k chr11 299 906 299891 299890 F 608 0.00 1325 accept_chi 1 ALIGNMENT 0 YS2-19e07.q1k chr06 296 62 139499 139498 C 235 0.00 1325 reject_low 11 ALIGNMENT 638 YS2-19e07.q1k chr02 1082 297 30432 31231 C 786 95.67 1325 reject_low 7 ALIGNMENT 904 YS2-19e07.p1k chr13 1058 30 365146 366189 C 1029 96.11 1261 accept_chi 0 ALIGNMENT 0 YS2-19e07.q1k chr07 296 62 813043 813042 C 235 0.00 1325 reject_low 12 ALIGNMENT 650 YS2-19e07.q1k chr15 297 1082 708433 709232 F 786 96.18 1325 reject_low 2 ALIGNMENT 0 YS2-19e07.q1k chr04 296 62 873407 873406 C 235 0.00 1325 reject_low 3 ALIGNMENT 0 YS2-19e07.q1k chr15 62 296 708433 708432 F 235 0.00 1325 reject_low 2 ALIGNMENT 629 YS2-19e07.q1k chr04 1082 297 981956 982755 C 786 95.29 1325 reject_low 14 ALIGNMENT 635 YS2-19e07.q1k chr06 1082 297 138699 139498 C 786 95.55 1325 reject_low 11 ALIGNMENT 256 YS2-19e07.q1k chr11 30 298 299623 299891 F 269 99.26 1325 accept_chi 1 ALIGNMENT 0 YS2-19e07.q1k chr03 296 62 86401 86400 C 235 0.00 1325 reject_low 10 ALIGNMENT 0 YS2-19e07.p1k chr13 828 395 366075 366074 C 434 0.00 1261 reject_low 15 ALIGNMENT 0 YS2-19e07.q1k chr02 296 62 31232 31231 C 235 0.00 1325 reject_low 7 ALIGNMENT 635 YS2-19e07.q1k chr07 1082 297 812243 813042 C 786 95.55 1325 reject_low 12 ALIGNMENT 0 YS2-19e07.q1k chr04 296 62 982756 982755 C 235 0.00 1325 reject_low 14 ALIGNMENT 635 YS2-19e07.q1k chr14 297 1082 566402 567201 F 786 95.55 1325 reject_low 13 ALIGNMENT 645 YS2-19e07.q1k chr15 1070 297 971086 971872 C 774 96.38 1325 reject_low 5 ALIGNMENT 638 YS2-19e07.q1k chr04 297 1082 518053 518852 F 786 95.67 1325 reject_low 8 ALIGNMENT 644 YS2-19e07.q1k chr04 1082 297 872607 873406 C 786 95.93 1325 reject_low 3 ALIGNMENT 0 YS2-19e07.q1k chr04 62 296 518053 518052 F 235 0.00 1325 reject_low 8 ALIGNMENT 0 YS2-19e07.q1k chr14 62 296 566402 566401 F 235 0.00 1325 reject_low 13 ALIGNMENT 0 YS2-19e07.q1k chr07 62 296 573114 573113 F 235 0.00 1325 reject_low 9 ALIGNMENT 635 YS2-19e07.q1k chr03 1082 297 85601 86400 C 786 95.55 1325 reject_low 10 ALIGNMENT 641 YS2-19e07.q1k chr12 1082 297 941980 942779 C 786 95.80 1325 reject_low 6 ALIGNMENT 0 YS2-19e07.q1k chr15 296 62 971873 971872 C 235 0.00 1325 reject_low 5 ALIGNMENT 638 YS2-19e07.q1k chr07 297 1082 573114 573913 F 786 95.67 1325 reject_low 9 ALIGNMENT 0 YS2-19e07.p1k chr13 365 62 366103 366102 C 304 0.00 1261 reject_low 15 ALIGNMENT 0 YS2-19e07.q1k chr12 296 62 942780 942779 C 235 0.00 1325 reject_low 6 ALIGNMENT 0 YS2-19e07.q1k chr12 62 296 980106 980105 F 235 0.00 1325 reject_low 4 ALIGNMENT 20 YS2-19e07.p1k chr13 394 366 366074 366102 C 29 89.66 1261 reject_low 15 ALIGNMENT 0 YS2-19e08.q1k chr04 364 324 1385862 1385861 C 41 0.00 364 accept_chi 0 ALIGNMENT 36 YS2-19e08.q1k vc_5 361 326 1 36 C 36 100.00 364 reject_low 7 ALIGNMENT 39 YS2-19e08.q1k vc_5 364 326 5025 5063 C 39 100.00 364 reject_low 5 ALIGNMENT 41 YS2-19e08.q1k vc_1 364 324 2472 2512 C 41 100.00 364 reject_low 2 ALIGNMENT 0 YS2-19e08.q1k vc_1 323 62 2513 2512 C 262 0.00 364 reject_low 2 ALIGNMENT 275 YS2-19e08.p1k chr04 31 321 1385864 1386154 F 291 98.97 339 accept_chi 1 ALIGNMENT 41 YS2-19e08.q1k vc_4 324 364 5831 5871 F 41 100.00 364 reject_low 4 ALIGNMENT 0 YS2-19e08.q1k vc_4 62 323 5831 5830 F 262 0.00 364 reject_low 4 ALIGNMENT 0 YS2-19e08.q1k vc_7 62 326 13525 13524 F 265 0.00 364 reject_low 6 ALIGNMENT 41 YS2-19e08.q1k vc_3 364 324 2472 2512 C 41 100.00 364 reject_low 3 ALIGNMENT 38 YS2-19e08.q1k vc_7 327 364 13525 13562 F 38 100.00 364 reject_low 6 ALIGNMENT 0 YS2-19e08.q1k vc_3 323 62 2513 2512 C 262 0.00 364 reject_low 3 ALIGNMENT 0 YS2-19e08.p1k chr04 322 339 1386154 1386153 F 18 0.00 339 accept_chi 1 ALIGNMENT 0 YS2-19e08.q1k vc_5 325 62 5064 5063 C 264 0.00 364 reject_low 5 ALIGNMENT 278 YS2-19e08.q1k chr04 323 30 1385861 1386154 C 294 98.98 364 accept_chi 0 ALIGNMENT 0 YS2-19e08.q1k vc_5 325 62 37 36 C 264 0.00 364 reject_low 7 ALIGNMENT 916 YS2-19e09.p1k chr07 39 1095 149699 150770 F 1057 96.69 1297 accept 0 ALIGNMENT 980 YS2-19e09.q1k chr07 1139 31 150440 151557 C 1109 97.57 1384 accept 0 ALIGNMENT 0 YS2-19e12.q1k vc_2 342 62 2147 2146 C 281 0.00 384 reject_low 3 ALIGNMENT 42 YS2-19e12.q1k vc_1 384 343 2472 2513 C 42 100.00 384 reject_low 2 ALIGNMENT 284 YS2-19e12.q1k chr08 38 343 386321 386627 F 306 99.02 384 accept_chi 0 ALIGNMENT 36 YS2-19e12.q1k vc_5 381 346 1 36 C 36 100.00 384 reject_low 8 ALIGNMENT 39 YS2-19e12.q1k vc_5 384 346 5025 5063 C 39 100.00 384 reject_low 6 ALIGNMENT 0 YS2-19e12.q1k vc_4 62 342 5830 5829 F 281 0.00 384 reject_low 5 ALIGNMENT 0 YS2-19e12.q1k vc_7 62 346 13525 13524 F 285 0.00 384 reject_low 7 ALIGNMENT 42 YS2-19e12.q1k vc_2 384 343 2105 2146 C 42 100.00 384 reject_low 3 ALIGNMENT 0 YS2-19e12.q1k vc_3 342 62 2514 2513 C 281 0.00 384 reject_low 4 ALIGNMENT 38 YS2-19e12.q1k vc_7 347 384 13525 13562 F 38 100.00 384 reject_low 7 ALIGNMENT 42 YS2-19e12.q1k vc_4 343 384 5830 5871 F 42 100.00 384 reject_low 5 ALIGNMENT 0 YS2-19e12.q1k chr08 344 384 386627 386626 F 41 0.00 384 accept_chi 0 ALIGNMENT 0 YS2-19e12.p1k chr08 407 389 386322 386321 C 19 0.00 407 accept_chi 1 ALIGNMENT 0 YS2-19e12.q1k vc_1 342 62 2514 2513 C 281 0.00 384 reject_low 2 ALIGNMENT 262 YS2-19e12.p1k chr08 388 91 386321 386615 C 298 98.32 407 accept_chi 1 ALIGNMENT 0 YS2-19e12.q1k vc_5 345 62 5064 5063 C 284 0.00 384 reject_low 6 ALIGNMENT 42 YS2-19e12.q1k vc_3 384 343 2472 2513 C 42 100.00 384 reject_low 4 ALIGNMENT 0 YS2-19e12.q1k vc_5 345 62 37 36 C 284 0.00 384 reject_low 8 ALIGNMENT 869 YS2-19e13.q1k chr12 41 1098 459310 460396 F 1058 95.94 1365 accept 0 ALIGNMENT 119 YS2-19e13.q1k chr12 406 524 482044 482162 F 119 100.00 1365 reject_low 7 ALIGNMENT 0 YS2-19e13.q1k chr12 525 856 485814 485813 F 332 0.00 1365 reject_low 8 ALIGNMENT 0 YS2-19e13.q1k chr06 856 147 31623 31622 C 710 0.00 1365 reject_low 5 ALIGNMENT 0 YS2-19e13.q1k chr12 62 336 459606 459605 F 275 0.00 1365 reject_low 4 ALIGNMENT 929 YS2-19e13.p1k chr12 1053 33 451660 452694 C 1021 97.65 1264 reject_low 1 ALIGNMENT 0 YS2-19e13.p1k chr12 151 62 490544 490543 C 90 0.00 1264 reject_low 2 ALIGNMENT 0 YS2-19e13.q1k chr12 62 405 482044 482043 F 344 0.00 1365 reject_low 7 ALIGNMENT 929 YS2-19e13.p1k chr12 1053 33 460797 461831 C 1021 97.65 1264 accept 0 ALIGNMENT 119 YS2-19e13.q1k chr12 406 524 472464 472582 F 119 100.00 1365 reject_low 6 ALIGNMENT 119 YS2-19e13.q1k chr12 406 524 485696 485814 F 119 100.00 1365 reject_low 8 ALIGNMENT 0 YS2-19e13.q1k chr12 62 405 472464 472463 F 344 0.00 1365 reject_low 6 ALIGNMENT 128 YS2-19e13.q1k chr12 406 539 489348 489481 F 134 98.51 1365 reject_low 2 ALIGNMENT 466 YS2-19e13.q1k chr12 41 524 468447 468930 F 484 99.79 1365 reject_low 3 ALIGNMENT 359 YS2-19e13.q1k chr12 337 738 459606 460016 F 402 97.26 1365 reject_low 4 ALIGNMENT 0 YS2-19e13.q1k chr12 62 405 489348 489347 F 344 0.00 1365 reject_low 2 ALIGNMENT 0 YS2-19e13.q1k chr12 525 856 468930 468929 F 332 0.00 1365 reject_low 3 ALIGNMENT 0 YS2-19e13.q1k chr12 62 405 485696 485695 F 344 0.00 1365 reject_low 8 ALIGNMENT 0 YS2-19e13.q1k chr12 739 856 460016 460015 F 118 0.00 1365 reject_low 4 ALIGNMENT 0 YS2-19e13.q1k chr12 525 856 482162 482161 F 332 0.00 1365 reject_low 7 ALIGNMENT 742 YS2-19e13.p1k chr12 941 152 489754 490543 C 790 98.10 1264 reject_low 2 ALIGNMENT 92 YS2-19e13.q1k chr06 146 41 31622 31727 C 106 98.11 1365 reject_low 5 ALIGNMENT 0 YS2-19e13.q1k chr12 540 856 489481 489480 F 317 0.00 1365 reject_low 2 ALIGNMENT 0 YS2-19e13.q1k chr12 525 856 472582 472581 F 332 0.00 1365 reject_low 6 ALIGNMENT 27 YS2-19e14.p1k chr04 177 240 390446 390509 F 64 89.06 579 reject_low 2 ALIGNMENT 0 YS2-19e14.p1k chr12 62 192 701210 701209 F 131 0.00 579 reject_low 6 ALIGNMENT 0 YS2-19e14.p1k chr04 241 579 390509 390508 F 339 0.00 579 reject_low 2 ALIGNMENT 495 YS2-19e14.p1k chr07 559 29 467393 467919 C 531 99.25 579 accept_chi 1 ALIGNMENT 0 YS2-19e14.q1k chr05 359 62 81240 81239 C 298 0.00 610 reject_low 10 ALIGNMENT 0 YS2-19e14.q1k chr05 610 402 81199 81198 C 209 0.00 610 reject_low 10 ALIGNMENT 23 YS2-19e14.q1k chr05 401 360 81198 81239 C 42 100.00 610 reject_low 10 ALIGNMENT 0 YS2-19e14.q1k chr05 62 352 142942 142941 F 291 0.00 610 reject_low 8 ALIGNMENT 499 YS2-19e14.q1k chr07 42 571 467393 467919 F 530 99.43 610 accept_chi 0 ALIGNMENT 0 YS2-19e14.q1k chr04 360 62 390510 390509 C 299 0.00 610 reject_low 3 ALIGNMENT 0 YS2-19e14.q1k chr16 354 62 650549 650548 C 293 0.00 610 reject_low 5 ALIGNMENT 0 YS2-19e14.q1k chr05 401 610 142989 142988 F 210 0.00 610 reject_low 8 ALIGNMENT 0 YS2-19e14.q1k chr12 360 62 701258 701257 C 299 0.00 610 reject_low 9 ALIGNMENT 23 YS2-19e14.p1k chr05 248 201 142942 142989 C 48 97.92 579 reject_low 4 ALIGNMENT 0 YS2-19e14.p1k chr05 579 249 142943 142942 C 331 0.00 579 reject_low 4 ALIGNMENT 23 YS2-19e14.q1k chr05 353 400 142942 142989 F 48 97.92 610 reject_low 8 ALIGNMENT 23 YS2-19e14.p1k chr05 200 241 81198 81239 F 42 100.00 579 reject_low 7 ALIGNMENT 23 YS2-19e14.p1k chr12 193 240 701210 701257 F 48 95.83 579 reject_low 6 ALIGNMENT 0 YS2-19e14.q1k chr12 610 409 701211 701210 C 202 0.00 610 reject_low 9 ALIGNMENT 0 YS2-19e14.p1k chr07 579 560 467394 467393 C 20 0.00 579 accept_chi 1 ALIGNMENT 0 YS2-19e14.q1k chr16 610 409 650496 650495 C 202 0.00 610 reject_low 5 ALIGNMENT 0 YS2-19e14.p1k chr05 62 199 81198 81197 F 138 0.00 579 reject_low 7 ALIGNMENT 0 YS2-19e14.p1k chr04 62 176 390446 390445 F 115 0.00 579 reject_low 2 ALIGNMENT 0 YS2-19e14.p1k chr05 242 579 81239 81238 F 338 0.00 579 reject_low 7 ALIGNMENT 28 YS2-19e14.q1k chr16 408 355 650495 650548 C 54 96.30 610 reject_low 5 ALIGNMENT 0 YS2-19e14.p1k chr05 200 62 142990 142989 C 139 0.00 579 reject_low 4 ALIGNMENT 27 YS2-19e14.q1k chr04 424 361 390446 390509 C 64 89.06 610 reject_low 3 ALIGNMENT 0 YS2-19e14.p1k chr12 241 579 701257 701256 F 339 0.00 579 reject_low 6 ALIGNMENT 0 YS2-19e14.q1k chr04 610 425 390447 390446 C 186 0.00 610 reject_low 3 ALIGNMENT 23 YS2-19e14.q1k chr12 408 361 701210 701257 C 48 95.83 610 reject_low 9 ALIGNMENT 0 YS2-19e14.q1k chr07 572 610 467919 467918 F 39 0.00 610 accept_chi 0 ALIGNMENT 988 YS2-19e15.q1k chr15 1151 30 368518 369645 C 1122 97.86 1338 accept 0 ALIGNMENT 883 YS2-19e15.p1k chr15 30 1028 363758 364769 F 999 97.80 1223 accept 0 ALIGNMENT 204 YS2-19e16.q1k chr15 267 37 673111 673342 C 231 97.40 308 accept_chi 0 ALIGNMENT 0 YS2-19e16.q1k vc_1 267 62 2513 2512 C 206 0.00 308 reject_low 2 ALIGNMENT 41 YS2-19e16.q1k vc_1 308 268 2472 2512 C 41 100.00 308 reject_low 2 ALIGNMENT 36 YS2-19e16.q1k vc_5 305 270 1 36 C 36 100.00 308 reject_low 8 ALIGNMENT 0 YS2-19e16.q1k vc_5 269 62 5064 5063 C 208 0.00 308 reject_low 6 ALIGNMENT 0 YS2-19e16.p1k chr15 261 279 673342 673341 F 19 0.00 279 accept_chi 1 ALIGNMENT 0 YS2-19e16.q1k vc_7 62 270 13525 13524 F 209 0.00 308 reject_low 7 ALIGNMENT 38 YS2-19e16.q1k vc_7 271 308 13525 13562 F 38 100.00 308 reject_low 7 ALIGNMENT 0 YS2-19e16.q1k vc_5 269 62 37 36 C 208 0.00 308 reject_low 8 ALIGNMENT 0 YS2-19e16.q1k vc_3 267 62 2513 2512 C 206 0.00 308 reject_low 4 ALIGNMENT 39 YS2-19e16.q1k vc_5 308 270 5025 5063 C 39 100.00 308 reject_low 6 ALIGNMENT 41 YS2-19e16.q1k vc_3 308 268 2472 2512 C 41 100.00 308 reject_low 4 ALIGNMENT 0 YS2-19e16.q1k chr15 308 268 673112 673111 C 41 0.00 308 accept_chi 0 ALIGNMENT 41 YS2-19e16.q1k vc_2 308 268 2105 2145 C 41 100.00 308 reject_low 3 ALIGNMENT 0 YS2-19e16.q1k vc_4 62 267 5831 5830 F 206 0.00 308 reject_low 5 ALIGNMENT 0 YS2-19e16.q1k vc_2 267 62 2146 2145 C 206 0.00 308 reject_low 3 ALIGNMENT 200 YS2-19e16.p1k chr15 31 260 673111 673342 F 230 96.96 279 accept_chi 1 ALIGNMENT 41 YS2-19e16.q1k vc_4 268 308 5831 5871 F 41 100.00 308 reject_low 5 ALIGNMENT 916 YS2-19e17.q1k chr16 1093 40 742853 743929 C 1054 97.15 1307 accept 0 ALIGNMENT 1021 YS2-19e17.p1k chr16 30 1255 739092 740328 F 1226 95.60 1306 accept 0 ALIGNMENT 0 YS2-19e18.q1k chr13 894 497 673053 673052 C 398 0.00 1404 reject_low 1 ALIGNMENT 496 YS2-19e18.q1k chr15 496 1140 759148 759804 F 645 93.64 1404 accept 0 ALIGNMENT 0 YS2-19e18.q1k chr15 62 495 759148 759147 F 434 0.00 1404 accept 0 ALIGNMENT 943 YS2-19e18.p1k chr15 1142 33 762380 763505 C 1110 94.95 1342 accept 0 ALIGNMENT 459 YS2-19e18.q1k chr13 496 35 673052 673513 C 462 100.00 1404 reject_low 1 ALIGNMENT 0 YS2-19e20.p1k chr12 287 270 466285 466284 C 18 0.00 287 accept 0 ALIGNMENT 41 YS2-19e20.q1k vc_3 309 269 2472 2512 C 41 100.00 309 reject_low 4 ALIGNMENT 0 YS2-19e20.q1k vc_3 268 62 2513 2512 C 207 0.00 309 reject_low 4 ALIGNMENT 232 YS2-19e20.q1k chr12 30 268 466284 466523 F 239 99.58 309 reject_low 1 ALIGNMENT 39 YS2-19e20.q1k vc_5 309 271 5025 5063 C 39 100.00 309 reject_low 6 ALIGNMENT 231 YS2-19e20.p1k chr12 269 35 457147 457381 C 235 100.00 287 reject_low 2 ALIGNMENT 38 YS2-19e20.q1k vc_7 272 309 13525 13562 F 38 100.00 309 reject_low 7 ALIGNMENT 0 YS2-19e20.q1k vc_1 268 62 2513 2512 C 207 0.00 309 reject_low 3 ALIGNMENT 41 YS2-19e20.q1k vc_1 309 269 2472 2512 C 41 100.00 309 reject_low 3 ALIGNMENT 0 YS2-19e20.q1k vc_4 62 268 5831 5830 F 207 0.00 309 reject_low 5 ALIGNMENT 36 YS2-19e20.q1k vc_5 306 271 1 36 C 36 100.00 309 reject_low 8 ALIGNMENT 231 YS2-19e20.p1k chr12 269 35 466284 466518 C 235 100.00 287 accept 0 ALIGNMENT 0 YS2-19e20.q1k chr12 269 309 466523 466522 F 41 0.00 309 reject_low 1 ALIGNMENT 232 YS2-19e20.q1k chr12 30 268 457147 457386 F 239 99.58 309 accept 0 ALIGNMENT 0 YS2-19e20.q1k vc_5 270 62 5064 5063 C 209 0.00 309 reject_low 6 ALIGNMENT 0 YS2-19e20.q1k chr12 269 309 457386 457385 F 41 0.00 309 accept 0 ALIGNMENT 0 YS2-19e20.q1k vc_7 62 271 13525 13524 F 210 0.00 309 reject_low 7 ALIGNMENT 41 YS2-19e20.q1k vc_4 269 309 5831 5871 F 41 100.00 309 reject_low 5 ALIGNMENT 0 YS2-19e20.q1k vc_5 270 62 37 36 C 209 0.00 309 reject_low 8 ALIGNMENT 0 YS2-19e20.p1k chr12 287 270 457148 457147 C 18 0.00 287 reject_low 2 ALIGNMENT 987 YS2-19e21.p1k chr15 1241 43 34372 35575 C 1199 95.08 1242 accept 0 ALIGNMENT 1017 YS2-19e21.q1k chr15 39 1270 33374 34606 F 1232 95.21 1309 accept 0 ALIGNMENT 955 YS2-19e23.p1k chr14 33 1143 117456 118585 F 1111 96.04 1173 accept 0 ALIGNMENT 1022 YS2-19e23.q1k chr14 1156 44 121549 122670 C 1113 97.93 1260 accept 0 ALIGNMENT 1080 YS2-19e24.p1k chr06 29 1237 1508 2718 F 1209 96.86 1246 reject_low 3 ALIGNMENT 0 YS2-19e24.q1k chr09 107 997 438766 438765 F 891 0.00 1249 reject_low 22 ALIGNMENT 66 YS2-19e24.q1k chr14 1116 998 7604 7726 C 119 86.55 1249 reject_low 5 ALIGNMENT 69 YS2-19e24.q1k chr13 1116 998 6517 6639 C 119 87.39 1249 reject_low 4 ALIGNMENT 909 YS2-19e24.q1k chr05 1182 85 6583 7687 C 1098 95.08 1249 accept 0 ALIGNMENT 531 YS2-19e24.q1k chr10 239 984 741844 742583 F 746 91.55 1249 reject_low 1 ALIGNMENT 0 YS2-19e24.q1k chr13 997 107 6640 6639 C 891 0.00 1249 reject_low 4 ALIGNMENT 1074 YS2-19e24.p1k chr12 29 1237 2471 3681 F 1209 96.69 1246 reject_low 9 ALIGNMENT 1065 YS2-19e24.p1k chr05 29 1237 2318 3528 F 1209 96.44 1246 accept 0 ALIGNMENT 1076 YS2-19e24.p1k chr02 29 1237 2671 3882 F 1209 96.77 1246 reject_low 6 ALIGNMENT 1071 YS2-19e24.p1k chr15 1237 29 1087763 1088973 C 1209 96.61 1246 reject_low 17 ALIGNMENT 1074 YS2-19e24.p1k chr16 1237 29 944496 945706 C 1209 96.69 1246 reject_low 12 ALIGNMENT 0 YS2-19e24.q1k chr04 997 985 1203 3132 C 13 0.00 1249 reject_low 2 ALIGNMENT 0 YS2-19e24.q1k chr04 226 107 3885 3884 C 120 0.00 1249 reject_low 2 ALIGNMENT 0 YS2-19e24.q1k chr06 984 107 5844 5843 C 878 0.00 1249 reject_low 3 ALIGNMENT 1074 YS2-19e24.p1k chr10 29 1237 2625 3835 F 1209 96.69 1246 reject_low 8 ALIGNMENT 1074 YS2-19e24.p1k chr12 29 1237 8006 9216 F 1209 96.69 1246 reject_low 10 ALIGNMENT 531 YS2-19e24.q1k chr04 984 227 3133 3884 C 758 91.16 1249 reject_low 2 ALIGNMENT 1071 YS2-19e24.p1k chr14 29 1237 2254 3464 F 1209 96.61 1246 reject_low 5 ALIGNMENT 69 YS2-19e24.q1k chr04 1116 998 1080 1202 C 119 87.39 1249 reject_low 2 ALIGNMENT 0 YS2-19e24.q1k chr10 107 238 741844 741843 F 132 0.00 1249 reject_low 1 ALIGNMENT 1071 YS2-19e24.p1k chr04 1237 29 1528598 1529808 C 1209 96.61 1246 reject_low 13 ALIGNMENT 1076 YS2-19e24.p1k chr08 1237 29 558949 560160 C 1209 96.77 1246 reject_low 7 ALIGNMENT 1071 YS2-19e24.p1k chr05 1237 29 573427 574637 C 1209 96.61 1246 reject_low 14 ALIGNMENT 1071 YS2-19e24.p1k chr16 29 1237 2163 3373 F 1209 96.61 1246 reject_low 18 ALIGNMENT 74 YS2-19e24.q1k chr06 1116 985 5707 5843 C 132 86.36 1249 reject_low 3 ALIGNMENT 1074 YS2-19e24.p1k chr13 29 1237 2347 3557 F 1209 96.69 1246 reject_low 4 ALIGNMENT 1068 YS2-19e24.p1k chr09 29 1237 2642 3852 F 1209 96.53 1246 reject_low 19 ALIGNMENT 1029 YS2-19e24.p1k chr08 29 1237 2199 3413 F 1209 95.53 1246 reject_low 20 ALIGNMENT 69 YS2-19e24.q1k chr02 998 1116 812078 812200 F 119 87.39 1249 reject_low 21 ALIGNMENT 1071 YS2-19e24.p1k chr12 1237 29 1074799 1076009 C 1209 96.61 1246 reject_low 16 ALIGNMENT 0 YS2-19e24.q1k chr02 107 997 812078 812077 F 891 0.00 1249 reject_low 21 ALIGNMENT 1074 YS2-19e24.p1k chr12 1237 29 1068136 1069346 C 1209 96.69 1246 reject_low 11 ALIGNMENT 1071 YS2-19e24.p1k chr07 1237 29 1087504 1088714 C 1209 96.61 1246 reject_low 15 ALIGNMENT 0 YS2-19e24.q1k chr14 997 107 7727 7726 C 891 0.00 1249 reject_low 5 ALIGNMENT 66 YS2-19e24.q1k chr09 998 1079 438766 438847 F 82 93.90 1249 reject_low 22 ALIGNMENT 971 YS2-19f02.p1k chr10 1151 26 146064 147205 C 1126 95.91 1285 accept 0 ALIGNMENT 966 YS2-19f02.q1k chr10 40 1198 142530 143710 F 1159 95.25 1438 accept 0 ALIGNMENT 862 YS2-19f03.q1k chr04 1040 37 1321219 1322240 C 1004 97.31 1361 accept 0 ALIGNMENT 965 YS2-19f03.p1k chr04 31 1164 1320071 1321223 F 1134 96.47 1322 accept 0 ALIGNMENT 922 YS2-19f05.q1k chr15 39 1122 715482 716579 F 1084 95.39 1400 accept 0 ALIGNMENT 930 YS2-19f05.p1k chr15 1117 34 718663 719761 C 1084 95.85 1361 accept 0 ALIGNMENT 663 YS2-19f06.q1k chr07 31 738 71661 72369 F 708 99.86 739 accept_chi 1 ALIGNMENT 665 YS2-19f06.p1k chr07 739 30 71660 72369 C 710 99.86 758 accept_chi 0 ALIGNMENT 0 YS2-19f06.p1k chr07 758 740 71661 71660 C 19 0.00 758 accept_chi 0 ALIGNMENT 997 YS2-19f08.p1k chr09 29 1128 86430 87546 F 1100 97.73 1342 accept 0 ALIGNMENT 870 YS2-19f08.q1k chr09 1011 38 90026 91016 C 974 97.33 1397 accept 0 ALIGNMENT 51 YS2-19f09.q1k vc_7 54 3 6360 6411 C 52 100.00 896|1,0 reject_vc 8 ALIGNMENT 0 YS2-19f09.q1k vc_4 303 310 1613 1881 F 8 0.00 896 reject_vc 9 ALIGNMENT 219 YS2-19f09.q1k vc_7 302 53 4923 5172 C 250 96.00 896|0,1 reject_vc 8 ALIGNMENT 109 YS2-19f09.q1k vc_4 311 599 1882 2182 F 289 80.97 896 reject_vc 9 ALIGNMENT 51 YS2-19f09.q1k vc_4 302 238 48 112 C 65 93.85 896 reject_low 10 ALIGNMENT 273 YS2-19f09.q1k vc_1 1 302 2689 2990 F 302 97.02 896 reject_vc 5 ALIGNMENT 387 YS2-19f09.q1k vc_5 1 599 2556 3166 F 599 88.98 896 reject_vc 2 ALIGNMENT 387 YS2-19f09.q1k vc_7 599 1 1959 2569 C 599 88.98 896 reject_vc 3 ALIGNMENT 273 YS2-19f09.q1k vc_3 1 302 2689 2990 F 302 97.02 896 reject_vc 7 ALIGNMENT 0 YS2-19f09.q1k vc_7 53 54 5172 6360 C 0 0.00 896 reject_vc 8 ALIGNMENT 51 YS2-19f09.q1k vc_4 238 302 1548 1612 F 65 93.85 896 reject_vc 9 ALIGNMENT 0 YS2-19f09.q1k vc_7 304 303 4700 4922 C 2 0.00 896 reject_vc 8 ALIGNMENT 198 YS2-19f09.p1k chr12 33 296 456971 457234 F 264 92.42 314 accept 0 ALIGNMENT 347 YS2-19f09.q1k vc_4 413 1 5240 5654 C 413 94.92 896 reject_vc 4 ALIGNMENT 273 YS2-19f09.q1k vc_2 1 302 2322 2623 F 302 97.02 896 reject_vc 6 ALIGNMENT 198 YS2-19f09.p1k chr12 33 296 466108 466371 F 264 92.42 314 accept 1 ALIGNMENT 81 YS2-19f09.q1k vc_7 413 305 4591 4699 C 109 91.74 896 reject_vc 8 ALIGNMENT 51 YS2-19f09.q1k vc_4 302 238 6275 6339 C 65 93.85 896 reject_low 11 ALIGNMENT 1005 YS2-19f10.p1k chr04 1201 34 112570 113751 C 1168 95.89 1387 accept 0 ALIGNMENT 0 YS2-19f10.p1k chr04 900 861 214706 214705 C 40 0.00 1387 reject_low 2 ALIGNMENT 153 YS2-19f10.q1k chr12 40 196 623278 623434 F 157 100.00 1489 reject_low 1 ALIGNMENT 0 YS2-19f10.q1k chr12 197 921 623434 623433 F 725 0.00 1489 reject_low 1 ALIGNMENT 0 YS2-19f10.p1k chr04 538 62 215027 215026 C 477 0.00 1387 reject_low 2 ALIGNMENT 0 YS2-19f10.q1k chr04 62 194 110637 110636 F 133 0.00 1489 accept 0 ALIGNMENT 106 YS2-19f10.p1k chr04 860 539 214705 215026 C 322 78.57 1387 reject_low 2 ALIGNMENT 898 YS2-19f10.q1k chr04 195 1237 110637 111692 F 1043 95.88 1489 accept 0 ALIGNMENT 959 YS2-19f11.p1k chr16 25 1133 71743 72858 F 1109 96.84 1326 accept 0 ALIGNMENT 940 YS2-19f11.q1k chr16 1194 46 75938 77086 C 1149 94.43 1442 accept 0 ALIGNMENT 538 YS2-19f14.q1k chr15 986 85 440919 441819 C 902 87.47 1443 accept 0 ALIGNMENT 973 YS2-19f15.q1k chr07 32 1171 852120 853276 F 1140 96.05 1412 accept 0 ALIGNMENT 981 YS2-19f15.p1k chr07 1158 60 855345 856451 C 1099 97.00 1345 accept 0 ALIGNMENT 879 YS2-19f17.p1k chr12 994 33 456941 457915 C 962 97.92 1274 accept 0 ALIGNMENT 1044 YS2-19f17.q1k chr12 52 1220 451793 452960 F 1169 96.15 1487 accept 0 ALIGNMENT 879 YS2-19f17.p1k chr12 994 33 466078 467052 C 962 97.92 1274 accept 1 ALIGNMENT 1044 YS2-19f17.q1k chr12 52 1220 460930 462097 F 1169 96.15 1487 accept 1 ALIGNMENT 746 YS2-19f17.q1k chr12 52 834 489761 490543 F 783 98.72 1487 reject_low 2 ALIGNMENT 0 YS2-19f17.q1k chr12 835 870 490543 490542 F 36 0.00 1487 reject_low 2 ALIGNMENT 1033 YS2-19f18.q1k chr15 1254 41 834190 835410 C 1214 95.06 1458 accept 0 ALIGNMENT 1054 YS2-19f18.p1k chr15 32 1239 829182 830400 F 1208 96.85 1371 accept 0 ALIGNMENT 41 YS2-19f20.q1k vc_3 622 582 2472 2512 C 41 100.00 622 reject_low 4 ALIGNMENT 41 YS2-19f20.q1k vc_2 622 582 2105 2145 C 41 100.00 622 reject_low 3 ALIGNMENT 0 YS2-19f20.q1k vc_4 62 581 5831 5830 F 520 0.00 622 reject_low 5 ALIGNMENT 38 YS2-19f20.q1k vc_7 585 622 13525 13562 F 38 100.00 622 reject_low 7 ALIGNMENT 0 YS2-19f20.p1k chr04 572 590 587216 587215 F 19 0.00 590 accept_chi 1 ALIGNMENT 497 YS2-19f20.q1k chr04 581 41 586676 587216 C 541 98.89 622 accept_chi 0 ALIGNMENT 41 YS2-19f20.q1k vc_4 582 622 5831 5871 F 41 100.00 622 reject_low 5 ALIGNMENT 0 YS2-19f20.q1k chr04 622 582 586677 586676 C 41 0.00 622 accept_chi 0 ALIGNMENT 0 YS2-19f20.q1k vc_5 583 62 37 36 C 522 0.00 622 reject_low 8 ALIGNMENT 483 YS2-19f20.p1k chr04 32 571 586676 587216 F 540 98.15 590 accept_chi 1 ALIGNMENT 36 YS2-19f20.q1k vc_5 619 584 1 36 C 36 100.00 622 reject_low 8 ALIGNMENT 41 YS2-19f20.q1k vc_1 622 582 2472 2512 C 41 100.00 622 reject_low 2 ALIGNMENT 39 YS2-19f20.q1k vc_5 622 584 5025 5063 C 39 100.00 622 reject_low 6 ALIGNMENT 0 YS2-19f20.q1k vc_3 581 62 2513 2512 C 520 0.00 622 reject_low 4 ALIGNMENT 0 YS2-19f20.q1k vc_7 62 584 13525 13524 F 523 0.00 622 reject_low 7 ALIGNMENT 0 YS2-19f20.q1k vc_5 583 62 5064 5063 C 522 0.00 622 reject_low 6 ALIGNMENT 0 YS2-19f20.q1k vc_1 581 62 2513 2512 C 520 0.00 622 reject_low 2 ALIGNMENT 0 YS2-19f20.q1k vc_2 581 62 2146 2145 C 520 0.00 622 reject_low 3 ALIGNMENT 140 YS2-19f21.p1k chr03 831 396 194549 194984 C 436 77.98 1298 reject_low 1 ALIGNMENT 1011 YS2-19f21.q1k chr10 1255 31 67095 68328 C 1225 95.76 1326 accept 0 ALIGNMENT 1059 YS2-19f21.p1k chr10 49 1287 62556 63793 F 1239 95.96 1298 accept 0 ALIGNMENT 0 YS2-19f21.p1k chr03 395 77 194985 194984 C 319 0.00 1298 reject_low 1 ALIGNMENT 0 YS2-19f21.p1k chr03 873 832 194550 194549 C 42 0.00 1298 reject_low 1 ALIGNMENT 1031 YS2-19f22.p1k chr09 1256 64 212964 214165 C 1193 96.06 1317 accept 0 ALIGNMENT 984 YS2-19f22.q1k chr09 32 1154 202987 204118 F 1123 96.88 1332 accept 0 ALIGNMENT 40 YS2-19f23.q1k vc_4 226 265 5832 5871 F 40 100.00 265 reject_low 5 ALIGNMENT 0 YS2-19f23.q1k vc_5 226 62 5064 5063 C 165 0.00 265 reject_low 6 ALIGNMENT 40 YS2-19f23.q1k vc_3 265 226 2472 2511 C 40 100.00 265 reject_low 4 ALIGNMENT 0 YS2-19f23.q1k vc_7 62 227 13525 13524 F 166 0.00 265 reject_low 7 ALIGNMENT 0 YS2-19f23.q1k vc_4 62 225 5832 5831 F 164 0.00 265 reject_low 5 ALIGNMENT 38 YS2-19f23.q1k vc_7 228 265 13525 13562 F 38 100.00 265 reject_low 7 ALIGNMENT 0 YS2-19f23.q1k vc_2 225 62 2145 2144 C 164 0.00 265 reject_low 3 ALIGNMENT 179 YS2-19f23.q1k chr15 226 38 323497 323685 C 189 99.47 265 accept_chi 0 ALIGNMENT 40 YS2-19f23.q1k vc_2 265 226 2105 2144 C 40 100.00 265 reject_low 3 ALIGNMENT 0 YS2-19f23.q1k chr15 265 227 323498 323497 C 39 0.00 265 accept_chi 0 ALIGNMENT 0 YS2-19f23.q1k vc_3 225 62 2512 2511 C 164 0.00 265 reject_low 4 ALIGNMENT 0 YS2-19f23.q1k vc_1 225 62 2512 2511 C 164 0.00 265 reject_low 2 ALIGNMENT 165 YS2-19f23.p1k chr15 33 221 323497 323685 F 189 96.83 228 accept_chi 1 ALIGNMENT 39 YS2-19f23.q1k vc_5 265 227 5025 5063 C 39 100.00 265 reject_low 6 ALIGNMENT 0 YS2-19f23.q1k vc_5 226 62 37 36 C 165 0.00 265 reject_low 8 ALIGNMENT 40 YS2-19f23.q1k vc_1 265 226 2472 2511 C 40 100.00 265 reject_low 2 ALIGNMENT 36 YS2-19f23.q1k vc_5 262 227 1 36 C 36 100.00 265 reject_low 8 ALIGNMENT 97 YS2-19g02.q1k chr09 936 1162 438747 438986 F 227 84.14 1386 reject_low 22 ALIGNMENT 0 YS2-19g02.q1k chr10 935 935 742577 744499 F 1 0.00 1386 reject_low 7 ALIGNMENT 101 YS2-19g02.q1k chr02 936 1103 812059 812233 F 168 89.29 1386 reject_low 21 ALIGNMENT 0 YS2-19g02.q1k chr13 935 62 6659 6658 C 874 0.00 1386 reject_low 3 ALIGNMENT 987 YS2-19g02.p1k chr08 32 1173 2199 3354 F 1142 95.97 1310 reject_low 5 ALIGNMENT 1032 YS2-19g02.p1k chr12 32 1173 8006 9157 F 1142 97.20 1310 reject_low 10 ALIGNMENT 0 YS2-19g02.q1k chr09 62 935 438747 438746 F 874 0.00 1386 reject_low 22 ALIGNMENT 1029 YS2-19g02.p1k chr14 32 1173 2254 3405 F 1142 97.11 1310 reject_low 4 ALIGNMENT 96 YS2-19g02.q1k chr14 1162 936 7505 7745 C 227 84.14 1386 reject_low 4 ALIGNMENT 1032 YS2-19g02.p1k chr10 32 1173 2625 3776 F 1142 97.20 1310 reject_low 8 ALIGNMENT 0 YS2-19g02.q1k chr10 62 195 741844 741843 F 134 0.00 1386 reject_low 7 ALIGNMENT 99 YS2-19g02.q1k chr04 1162 936 981 1221 C 227 84.58 1386 reject_low 6 ALIGNMENT 1029 YS2-19g02.p1k chr07 1173 32 1087563 1088714 C 1142 97.11 1310 reject_low 2 ALIGNMENT 1026 YS2-19g02.p1k chr05 32 1173 2318 3469 F 1142 97.02 1310 accept 0 ALIGNMENT 1038 YS2-19g02.p1k chr06 32 1173 1508 2659 F 1142 97.37 1310 reject_low 1 ALIGNMENT 1029 YS2-19g02.p1k chr05 1173 32 573486 574637 C 1142 97.11 1310 reject_low 15 ALIGNMENT 0 YS2-19g02.q1k chr04 183 62 3885 3884 C 122 0.00 1386 reject_low 6 ALIGNMENT 1032 YS2-19g02.p1k chr12 32 1173 2471 3622 F 1142 97.20 1310 reject_low 9 ALIGNMENT 1029 YS2-19g02.p1k chr16 32 1173 2163 3314 F 1142 97.11 1310 reject_low 19 ALIGNMENT 547 YS2-19g02.q1k chr10 196 934 741844 742576 F 739 92.69 1386 reject_low 7 ALIGNMENT 0 YS2-19g02.q1k chr06 935 62 5849 5848 C 874 0.00 1386 reject_low 1 ALIGNMENT 546 YS2-19g02.q1k chr04 934 184 3140 3884 C 751 92.28 1386 reject_low 6 ALIGNMENT 1029 YS2-19g02.p1k chr12 1173 32 1074858 1076009 C 1142 97.11 1310 reject_low 17 ALIGNMENT 1031 YS2-19g02.p1k chr02 32 1173 2671 3823 F 1142 97.20 1310 reject_low 12 ALIGNMENT 1029 YS2-19g02.p1k chr12 1173 32 1068195 1069346 C 1142 97.11 1310 reject_low 16 ALIGNMENT 0 YS2-19g02.q1k chr02 62 935 812059 812058 F 874 0.00 1386 reject_low 21 ALIGNMENT 0 YS2-19g02.q1k chr04 935 935 1222 3139 C 1 0.00 1386 reject_low 6 ALIGNMENT 1029 YS2-19g02.p1k chr15 1173 32 1087822 1088973 C 1142 97.11 1310 reject_low 18 ALIGNMENT 116 YS2-19g02.q1k chr07 934 1162 1083321 1083563 F 229 86.90 1386 reject_low 2 ALIGNMENT 103 YS2-19g02.q1k chr08 1162 936 5582 5820 C 227 85.46 1386 reject_low 5 ALIGNMENT 986 YS2-19g02.q1k chr05 1197 41 6511 7687 C 1157 96.54 1386 accept 0 ALIGNMENT 1032 YS2-19g02.p1k chr13 32 1173 2347 3498 F 1142 97.20 1310 reject_low 3 ALIGNMENT 0 YS2-19g02.q1k chr08 935 62 5821 5820 C 874 0.00 1386 reject_low 5 ALIGNMENT 1029 YS2-19g02.p1k chr04 1173 32 1528657 1529808 C 1142 97.11 1310 reject_low 14 ALIGNMENT 1031 YS2-19g02.p1k chr08 1173 32 559008 560160 C 1142 97.20 1310 reject_low 13 ALIGNMENT 0 YS2-19g02.q1k chr14 935 62 7746 7745 C 874 0.00 1386 reject_low 4 ALIGNMENT 101 YS2-19g02.q1k chr13 1103 936 6484 6658 C 168 89.29 1386 reject_low 3 ALIGNMENT 1032 YS2-19g02.p1k chr16 1173 32 944555 945706 C 1142 97.20 1310 reject_low 11 ALIGNMENT 99 YS2-19g02.q1k chr10 936 1162 744500 744740 F 227 84.58 1386 reject_low 7 ALIGNMENT 1026 YS2-19g02.p1k chr09 32 1173 2642 3793 F 1142 97.02 1310 reject_low 20 ALIGNMENT 111 YS2-19g02.q1k chr06 1162 936 5608 5848 C 227 86.34 1386 reject_low 1 ALIGNMENT 0 YS2-19g02.q1k chr07 62 933 1083321 1083320 F 872 0.00 1386 reject_low 2 ALIGNMENT 888 YS2-19g03.p1k chr12 1015 29 744316 745312 C 987 97.87 1239 accept 0 ALIGNMENT 987 YS2-19g03.q1k chr12 40 1141 741250 742360 F 1102 97.64 1357 accept 0 ALIGNMENT 0 YS2-19g04.p1k chr05 430 897 435820 435819 F 468 0.00 1338 reject_low 10 ALIGNMENT 0 YS2-19g04.p1k chr07 897 430 122274 122273 C 468 0.00 1338 reject_low 5 ALIGNMENT 0 YS2-19g04.p1k chr13 430 897 480692 480691 F 468 0.00 1338 reject_low 11 ALIGNMENT 0 YS2-19g04.p1k chr16 346 62 582141 582140 C 285 0.00 1338 reject_low 9 ALIGNMENT 74 YS2-19g04.p1k chr10 429 346 414881 414964 C 84 96.43 1338 reject_low 8 ALIGNMENT 0 YS2-19g04.p1k chr11 897 437 202640 202639 C 461 0.00 1338 reject_low 3 ALIGNMENT 0 YS2-19g04.p1k chr09 62 347 300219 300218 F 286 0.00 1338 reject_low 13 ALIGNMENT 0 YS2-19g04.p1k chr03 438 897 151361 151360 F 460 0.00 1338 reject_low 2 ALIGNMENT 0 YS2-19g04.p1k chr04 430 897 1352528 1352527 F 468 0.00 1338 reject_low 6 ALIGNMENT 0 YS2-19g04.p1k chr16 897 430 582060 582059 C 468 0.00 1338 reject_low 9 ALIGNMENT 868 YS2-19g04.q1k chr06 1002 40 231976 232944 C 963 97.51 1291 accept 0 ALIGNMENT 0 YS2-19g04.p1k chr09 430 897 300298 300297 F 468 0.00 1338 reject_low 13 ALIGNMENT 0 YS2-19g04.p1k chr10 897 430 414882 414881 C 468 0.00 1338 reject_low 8 ALIGNMENT 75 YS2-19g04.p1k chr07 429 344 122273 122356 C 86 97.67 1338 reject_low 5 ALIGNMENT 0 YS2-19g04.p1k chr03 62 346 151272 151271 F 285 0.00 1338 reject_low 2 ALIGNMENT 73 YS2-19g04.p1k chr04 429 357 1201740 1201812 C 73 100.00 1338 reject_low 12 ALIGNMENT 75 YS2-19g04.p1k chr07 429 346 876399 876481 C 84 97.62 1338 reject_low 7 ALIGNMENT 0 YS2-19g04.p1k chr11 355 62 202719 202718 C 294 0.00 1338 reject_low 3 ALIGNMENT 0 YS2-19g04.p1k chr07 897 430 876400 876399 C 468 0.00 1338 reject_low 7 ALIGNMENT 0 YS2-19g04.p1k chr05 62 355 135424 135423 F 294 0.00 1338 reject_low 4 ALIGNMENT 74 YS2-19g04.p1k chr13 356 429 480619 480692 F 74 100.00 1338 reject_low 11 ALIGNMENT 77 YS2-19g04.p1k chr03 347 437 151272 151361 F 91 95.60 1338 reject_low 2 ALIGNMENT 76 YS2-19g04.p1k chr11 436 356 202639 202718 C 81 98.77 1338 reject_low 3 ALIGNMENT 76 YS2-19g04.p1k chr05 356 434 135424 135502 F 79 98.73 1338 reject_low 4 ALIGNMENT 76 YS2-19g04.p1k chr07 330 429 185693 185792 F 100 93.00 1338 reject_low 1 ALIGNMENT 0 YS2-19g04.p1k chr07 343 62 122357 122356 C 282 0.00 1338 reject_low 5 ALIGNMENT 0 YS2-19g04.p1k chr04 62 344 1352445 1352444 F 283 0.00 1338 reject_low 6 ALIGNMENT 0 YS2-19g04.p1k chr05 435 897 135502 135501 F 463 0.00 1338 reject_low 4 ALIGNMENT 1031 YS2-19g04.p1k chr06 28 1217 226347 227540 F 1190 96.05 1338 accept 0 ALIGNMENT 0 YS2-19g04.p1k chr10 345 62 414965 414964 C 284 0.00 1338 reject_low 8 ALIGNMENT 74 YS2-19g04.p1k chr16 429 347 582059 582140 C 83 97.59 1338 reject_low 9 ALIGNMENT 0 YS2-19g04.p1k chr07 345 62 876482 876481 C 284 0.00 1338 reject_low 7 ALIGNMENT 0 YS2-19g04.p1k chr05 62 355 435747 435746 F 294 0.00 1338 reject_low 10 ALIGNMENT 76 YS2-19g04.p1k chr04 345 429 1352445 1352528 F 85 97.65 1338 reject_low 6 ALIGNMENT 74 YS2-19g04.p1k chr05 356 429 435747 435820 F 74 100.00 1338 reject_low 10 ALIGNMENT 0 YS2-19g04.p1k chr04 356 62 1201813 1201812 C 295 0.00 1338 reject_low 12 ALIGNMENT 0 YS2-19g04.p1k chr04 897 430 1201741 1201740 C 468 0.00 1338 reject_low 12 ALIGNMENT 69 YS2-19g04.p1k chr09 348 429 300219 300298 F 82 96.34 1338 reject_low 13 ALIGNMENT 0 YS2-19g04.p1k chr07 62 329 185693 185692 F 268 0.00 1338 reject_low 1 ALIGNMENT 0 YS2-19g04.p1k chr13 62 355 480619 480618 F 294 0.00 1338 reject_low 11 ALIGNMENT 0 YS2-19g04.p1k chr07 430 897 185792 185791 F 468 0.00 1338 reject_low 1 ALIGNMENT 34 YS2-19g08.p1k chrm 189 259 72977 73044 F 71 87.32 280 reject_low 1 ALIGNMENT 119 YS2-19g08.p1k chrm 259 29 93 311 C 231 92.64 280 accept 0 ALIGNMENT 26 YS2-19g08.p1k chrm 226 259 66827 66860 F 34 97.06 280 reject_low 2 ALIGNMENT 0 YS2-19g08.p1k chrm 260 280 73044 73043 F 21 0.00 280 reject_low 1 ALIGNMENT 0 YS2-19g08.p1k chrm 260 280 66860 66859 F 21 0.00 280 reject_low 2 ALIGNMENT 0 YS2-19g08.p1k chrm 62 225 66827 66826 F 164 0.00 280 reject_low 2 ALIGNMENT 0 YS2-19g08.p1k chrm 280 260 94 93 C 21 0.00 280 accept 0 ALIGNMENT 0 YS2-19g08.p1k chrm 62 188 72977 72976 F 127 0.00 280 reject_low 1 ALIGNMENT 965 YS2-19g10.p1k chr07 33 1117 892439 893537 F 1085 96.96 1318 accept 0 ALIGNMENT 990 YS2-19g10.q1k chr07 1188 29 895850 897026 C 1160 95.95 1411 accept 0 ALIGNMENT 897 YS2-19g11.p1k chr12 1072 21 884634 885700 C 1052 96.29 1283 accept 0 ALIGNMENT 985 YS2-19g11.q1k chr12 36 1142 883995 885116 F 1107 97.38 1392 accept 0 ALIGNMENT 1031 YS2-19g12.q1k chr02 1179 38 322774 323924 C 1142 96.94 1451 accept 0 ALIGNMENT 784 YS2-19g12.p1k chr02 45 1044 319561 320567 F 1000 94.20 1326 accept 0 ALIGNMENT 0 YS2-19g13.p1k chr06 203 186 91001 91000 C 18 0.00 203 accept_chi 1 ALIGNMENT 38 YS2-19g13.q1k vc_7 192 229 13525 13562 F 38 100.00 229 reject_low 6 ALIGNMENT 0 YS2-19g13.q1k vc_5 190 62 5064 5063 C 129 0.00 229 reject_low 5 ALIGNMENT 0 YS2-19g13.q1k vc_3 188 62 2513 2512 C 127 0.00 229 reject_low 3 ALIGNMENT 0 YS2-19g13.q1k vc_1 188 62 2513 2512 C 127 0.00 229 reject_low 2 ALIGNMENT 41 YS2-19g13.q1k vc_3 229 189 2472 2512 C 41 100.00 229 reject_low 3 ALIGNMENT 41 YS2-19g13.q1k vc_1 229 189 2472 2512 C 41 100.00 229 reject_low 2 ALIGNMENT 41 YS2-19g13.q1k vc_4 189 229 5831 5871 F 41 100.00 229 reject_low 4 ALIGNMENT 0 YS2-19g13.q1k vc_4 62 188 5831 5830 F 127 0.00 229 reject_low 4 ALIGNMENT 134 YS2-19g13.p1k chr06 185 34 91000 91151 C 152 97.37 203 accept_chi 1 ALIGNMENT 36 YS2-19g13.q1k vc_5 226 191 1 36 C 36 100.00 229 reject_low 7 ALIGNMENT 0 YS2-19g13.q1k vc_5 190 62 37 36 C 129 0.00 229 reject_low 7 ALIGNMENT 39 YS2-19g13.q1k vc_5 229 191 5025 5063 C 39 100.00 229 reject_low 5 ALIGNMENT 143 YS2-19g13.q1k chr06 38 189 91000 91151 F 152 99.34 229 accept_chi 0 ALIGNMENT 0 YS2-19g13.q1k chr06 190 229 91151 91150 F 40 0.00 229 accept_chi 0 ALIGNMENT 0 YS2-19g13.q1k vc_7 62 191 13525 13524 F 130 0.00 229 reject_low 6 ALIGNMENT 967 YS2-19g16.p1k chr07 34 1104 847542 848623 F 1071 97.57 1309 accept 0 ALIGNMENT 911 YS2-19g16.q1k chr07 1061 30 848504 849549 C 1032 96.51 1364 accept 0 ALIGNMENT 791 YS2-19g17.q1k chr04 38 975 210631 211563 F 938 96.59 1336 accept 0 ALIGNMENT 1027 YS2-19g17.p1k chr04 1232 31 213665 214879 C 1202 96.01 1282 accept 0 ALIGNMENT 247 YS2-19g18.q1k vc_7 303 53 4922 5172 C 251 99.60 1150|0,1 reject_low 7 ALIGNMENT 65 YS2-19g18.q1k vc_4 304 238 6273 6339 C 67 100.00 1150 reject_low 9 ALIGNMENT 107 YS2-19g18.q1k vc_7 421 305 4583 4699 C 117 97.44 1150 reject_low 7 ALIGNMENT 65 YS2-19g18.q1k vc_4 304 238 46 112 C 67 100.00 1150 reject_low 8 ALIGNMENT 0 YS2-19g18.q1k vc_2 304 356 2624 2623 F 53 0.00 1150 reject_low 5 ALIGNMENT 0 YS2-19g18.q1k vc_4 62 237 1548 1547 F 176 0.00 1150 reject_low 2 ALIGNMENT 0 YS2-19g18.q1k vc_3 304 356 2991 2990 F 53 0.00 1150 reject_low 6 ALIGNMENT 404 YS2-19g18.q1k vc_4 421 1 5232 5654 C 421 98.81 1150 reject_low 3 ALIGNMENT 302 YS2-19g18.q1k vc_2 1 303 2322 2624 F 303 100.00 1150 reject_low 5 ALIGNMENT 0 YS2-19g18.q1k vc_7 53 54 5172 6360 C 0 0.00 1150 reject_low 7 ALIGNMENT 682 YS2-19g18.q1k vc_7 898 1 1671 2569 C 898 92.32 1150 reject_vc 1 ALIGNMENT 0 YS2-19g18.q1k vc_4 237 62 113 112 C 176 0.00 1150 reject_low 8 ALIGNMENT 302 YS2-19g18.q1k vc_1 1 303 2689 2991 F 303 100.00 1150 reject_low 4 ALIGNMENT 0 YS2-19g18.q1k vc_4 356 305 6274 6273 C 52 0.00 1150 reject_low 9 ALIGNMENT 0 YS2-19g18.q1k vc_4 305 307 1615 1878 F 3 0.00 1150 reject_low 2 ALIGNMENT 0 YS2-19g18.q1k vc_7 304 304 4700 4921 C 1 0.00 1150 reject_low 7 ALIGNMENT 682 YS2-19g18.q1k vc_5 1 898 2556 3454 F 898 92.54 1150 reject_vc 0 ALIGNMENT 0 YS2-19g18.q1k vc_4 237 62 6340 6339 C 176 0.00 1150 reject_low 9 ALIGNMENT 65 YS2-19g18.q1k vc_4 238 304 1548 1614 F 67 100.00 1150 reject_low 2 ALIGNMENT 371 YS2-19g18.q1k vc_4 308 898 1879 2470 F 591 88.49 1150 reject_low 2 ALIGNMENT 0 YS2-19g18.q1k vc_4 356 305 47 46 C 52 0.00 1150 reject_low 8 ALIGNMENT 0 YS2-19g18.q1k vc_1 304 356 2991 2990 F 53 0.00 1150 reject_low 4 ALIGNMENT 51 YS2-19g18.q1k vc_7 54 3 6360 6411 C 52 100.00 1150|1,0 reject_low 7 ALIGNMENT 302 YS2-19g18.q1k vc_3 1 303 2689 2991 F 303 100.00 1150 reject_low 6 ALIGNMENT 996 YS2-19g19.q1k chr12 38 1197 447093 448247 F 1160 96.03 1385 accept 0 ALIGNMENT 1010 YS2-19g19.p1k chr12 1239 43 449459 450663 C 1197 95.91 1306 accept 0 ALIGNMENT 942 YS2-19g20.q1k chr04 1104 37 1278276 1279364 C 1068 96.63 1365 accept 0 ALIGNMENT 943 YS2-19g20.p1k chr04 33 1159 1274482 1275625 F 1127 95.65 1305 accept 0 ALIGNMENT 0 YS2-19g23.q1k vc_1 312 62 2513 2512 C 251 0.00 353 reject_low 2 ALIGNMENT 0 YS2-19g23.p1k chr12 315 332 72408 72407 F 18 0.00 332 accept_chi 1 ALIGNMENT 38 YS2-19g23.q1k vc_7 316 353 13525 13562 F 38 100.00 353 reject_low 6 ALIGNMENT 0 YS2-19g23.q1k vc_7 62 315 13525 13524 F 254 0.00 353 reject_low 6 ALIGNMENT 0 YS2-19g23.q1k chr12 353 313 72126 72125 C 41 0.00 353 accept_chi 0 ALIGNMENT 41 YS2-19g23.q1k vc_4 313 353 5831 5871 F 41 100.00 353 reject_low 4 ALIGNMENT 264 YS2-19g23.p1k chr12 35 314 72129 72408 F 280 98.57 332 accept_chi 1 ALIGNMENT 41 YS2-19g23.q1k vc_1 353 313 2472 2512 C 41 100.00 353 reject_low 2 ALIGNMENT 36 YS2-19g23.q1k vc_5 350 315 1 36 C 36 100.00 353 reject_low 7 ALIGNMENT 0 YS2-19g23.q1k vc_5 314 62 37 36 C 253 0.00 353 reject_low 7 ALIGNMENT 0 YS2-19g23.q1k vc_5 314 62 5064 5063 C 253 0.00 353 reject_low 5 ALIGNMENT 0 YS2-19g23.q1k vc_4 62 312 5831 5830 F 251 0.00 353 reject_low 4 ALIGNMENT 39 YS2-19g23.q1k vc_5 353 315 5025 5063 C 39 100.00 353 reject_low 5 ALIGNMENT 277 YS2-19g23.q1k chr12 312 29 72125 72408 C 284 99.65 353 accept_chi 0 ALIGNMENT 0 YS2-19g23.q1k vc_3 312 62 2513 2512 C 251 0.00 353 reject_low 3 ALIGNMENT 41 YS2-19g23.q1k vc_3 353 313 2472 2512 C 41 100.00 353 reject_low 3 ALIGNMENT 984 YS2-19g24.p1k chr10 57 1231 369544 370721 F 1175 95.83 1282 accept 0 ALIGNMENT 1019 YS2-19g24.q1k chr10 1248 56 372692 373878 C 1193 96.40 1363 accept 0 ALIGNMENT 392 YS2-19h01.p1k vc_7 1 645 13918 14580 F 645 87.75 645 reject_vc 5 ALIGNMENT 382 YS2-19h01.p1k vc_6 1 522 3712 4244 F 522 91.76 645 reject_low 6 ALIGNMENT 398 YS2-19h01.p1k vc_1 645 1 1087 1749 C 645 88.06 645 reject_vc 1 ALIGNMENT 392 YS2-19h01.p1k vc_7 1 645 456 1118 F 645 87.75 645 reject_vc 4 ALIGNMENT 398 YS2-19h01.p1k vc_2 645 1 1087 1749 C 645 88.06 645 reject_vc 2 ALIGNMENT 398 YS2-19h01.p1k vc_3 645 1 1087 1749 C 645 88.06 645 reject_vc 3 ALIGNMENT 401 YS2-19h01.p1k vc_5 645 1 4007 4669 C 645 88.22 645 reject_vc 0 ALIGNMENT 277 YS2-19h03.p1k vc_2 1297 858 1670 2105 C 440 89.32 1339 reject_low 5 ALIGNMENT 0 YS2-19h03.q1k vc_5 851 62 5064 5063 C 790 0.00 1425 reject_low 20 ALIGNMENT 26 YS2-19h03.p1k vc_3 888 858 2441 2472 C 31 96.77 1339 reject_low 25 ALIGNMENT 216 YS2-19h03.q1k vc_3 890 1192 2531 2842 F 303 92.08 1425 reject_low 11 ALIGNMENT 140 YS2-19h03.q1k vc_4 890 1050 6353 6514 F 161 96.27 1425|1,0 reject_low 15 ALIGNMENT 0 YS2-19h03.p1k vc_6 62 1086 3585 3584 F 1025 0.00 1339 reject_low 13 ALIGNMENT 210 YS2-19h03.q1k vc_4 1192 890 5499 5812 C 303 91.75 1425 reject_low 12 ALIGNMENT 0 YS2-19h03.q1k vc_4 62 889 126 125 F 828 0.00 1425 reject_low 14 ALIGNMENT 38 YS2-19h03.q1k vc_7 853 890 63 100 F 38 100.00 1425 reject_low 21 ALIGNMENT 35 YS2-19h03.q1k vc_7 1098 1050 6362 6411 C 49 91.84 1425 reject_low 26 ALIGNMENT 277 YS2-19h03.p1k vc_1 1297 858 1670 2105 C 440 89.32 1339 reject_low 4 ALIGNMENT 140 YS2-19h03.q1k vc_4 890 1050 126 287 F 161 96.27 1425 reject_low 14 ALIGNMENT 42 YS2-19h03.q1k vc_1 890 848 2472 2514 C 43 100.00 1425 reject_low 17 ALIGNMENT 0 YS2-19h03.q1k vc_3 847 62 2515 2514 C 786 0.00 1425 reject_low 19 ALIGNMENT 0 YS2-19h03.q1k vc_5 851 62 37 36 C 790 0.00 1425 reject_low 23 ALIGNMENT 0 YS2-19h03.q1k vc_7 62 852 13525 13524 F 791 0.00 1425 reject_low 22 ALIGNMENT 0 YS2-19h03.q1k vc_7 889 62 2728 2727 C 828 0.00 1425 reject_low 3 ALIGNMENT 0 YS2-19h03.p1k vc_7 62 857 100 99 F 796 0.00 1339 reject_low 3 ALIGNMENT 216 YS2-19h03.q1k vc_1 890 1192 2531 2842 F 303 92.08 1425 reject_low 9 ALIGNMENT 0 YS2-19h03.p1k vc_1 857 62 2106 2105 C 796 0.00 1339 reject_low 4 ALIGNMENT 0 YS2-19h03.q1k vc_2 847 62 2148 2147 C 786 0.00 1425 reject_low 18 ALIGNMENT 36 YS2-19h03.q1k vc_5 887 852 1 36 C 36 100.00 1425 reject_low 23 ALIGNMENT 0 YS2-19h03.p1k vc_5 857 62 5026 5025 C 796 0.00 1339 reject_low 2 ALIGNMENT 0 YS2-19h03.q1k vc_5 902 888 2 1 C 15 0.00 1425 reject_low 23 ALIGNMENT 0 YS2-19h03.p1k vc_7 62 857 13562 13561 F 796 0.00 1339 reject_low 7 ALIGNMENT 0 YS2-19h03.q1k vc_7 1049 62 6412 6411 C 988 0.00 1425 reject_low 26 ALIGNMENT 0 YS2-19h03.q1k vc_7 1098 1099 5172 6361 C 0 0.00 1425 reject_low 26 ALIGNMENT 0 YS2-19h03.p1k vc_3 857 62 2473 2472 C 796 0.00 1339 reject_low 25 ALIGNMENT 0 YS2-19h03.q1k vc_4 891 890 5872 6353 F 0 0.00 1425 reject_low 15 ALIGNMENT 0 YS2-19h03.p1k chr12 841 868 225135 225134 F 28 0.00 1339 accept_chi 1 ALIGNMENT 783 YS2-19h03.q1k chr12 849 39 224325 225135 C 811 100.00 1425 accept_chi 0 ALIGNMENT 26 YS2-19h03.p1k vc_1 888 858 2441 2472 C 31 96.77 1339 reject_low 24 ALIGNMENT 277 YS2-19h03.p1k vc_3 1297 858 1670 2105 C 440 89.32 1339 reject_low 6 ALIGNMENT 277 YS2-19h03.p1k vc_7 858 1297 100 535 F 440 89.32 1339 reject_low 3 ALIGNMENT 216 YS2-19h03.q1k vc_5 890 1192 2398 2709 F 303 92.08 1425 reject_low 2 ALIGNMENT 0 YS2-19h03.q1k chr12 902 850 224326 224325 C 53 0.00 1425 accept_chi 0 ALIGNMENT 216 YS2-19h03.q1k vc_2 890 1192 2164 2475 F 303 92.08 1425 reject_low 10 ALIGNMENT 42 YS2-19h03.q1k vc_4 848 890 5829 5871 F 43 100.00 1425 reject_low 15 ALIGNMENT 39 YS2-19h03.q1k vc_5 890 852 5025 5063 C 39 100.00 1425 reject_low 20 ALIGNMENT 42 YS2-19h03.q1k vc_2 890 848 2105 2147 C 43 100.00 1425 reject_low 18 ALIGNMENT 0 YS2-19h03.p1k vc_2 857 62 2106 2105 C 796 0.00 1339 reject_low 5 ALIGNMENT 277 YS2-19h03.p1k vc_7 858 1297 13562 13997 F 440 89.32 1339 reject_low 7 ALIGNMENT 0 YS2-19h03.p1k vc_4 62 857 5871 5870 F 796 0.00 1339 reject_low 8 ALIGNMENT 0 YS2-19h03.p1k vc_3 857 62 2106 2105 C 796 0.00 1339 reject_low 6 ALIGNMENT 216 YS2-19h03.q1k vc_7 1192 890 2416 2727 C 303 92.41 1425 reject_low 3 ALIGNMENT 0 YS2-19h03.q1k vc_2 62 889 2164 2163 F 828 0.00 1425 reject_low 10 ALIGNMENT 0 YS2-19h03.q1k vc_4 889 62 1535 1534 C 828 0.00 1425 reject_low 16 ALIGNMENT 0 YS2-19h03.q1k vc_3 62 889 2531 2530 F 828 0.00 1425 reject_low 11 ALIGNMENT 247 YS2-19h03.p1k vc_4 858 1174 5871 6187 F 317 93.69 1339 reject_low 8 ALIGNMENT 42 YS2-19h03.q1k vc_3 890 848 2472 2514 C 43 100.00 1425 reject_low 19 ALIGNMENT 81 YS2-19h03.q1k vc_4 971 890 1453 1534 C 82 100.00 1425 reject_low 16 ALIGNMENT 0 YS2-19h03.q1k vc_1 62 889 2531 2530 F 828 0.00 1425 reject_low 9 ALIGNMENT 0 YS2-19h03.p1k vc_1 857 62 2473 2472 C 796 0.00 1339 reject_low 24 ALIGNMENT 0 YS2-19h03.q1k vc_4 62 847 5829 5828 F 786 0.00 1425 reject_low 15 ALIGNMENT 765 YS2-19h03.p1k chr12 30 840 224325 225135 F 811 99.38 1339 accept_chi 1 ALIGNMENT 0 YS2-19h03.q1k vc_7 62 852 63 62 F 791 0.00 1425 reject_low 21 ALIGNMENT 48 YS2-19h03.q1k vc_7 1192 1099 5071 5171 C 94 86.17 1425 reject_low 26 ALIGNMENT 0 YS2-19h03.q1k vc_5 62 889 2398 2397 F 828 0.00 1425 reject_low 2 ALIGNMENT 0 YS2-19h03.q1k vc_4 889 62 5813 5812 C 828 0.00 1425 reject_low 12 ALIGNMENT 96 YS2-19h03.p1k vc_6 1087 1297 3585 3791 F 211 83.89 1339 reject_low 13 ALIGNMENT 0 YS2-19h03.q1k vc_1 847 62 2515 2514 C 786 0.00 1425 reject_low 17 ALIGNMENT 38 YS2-19h03.q1k vc_7 853 890 13525 13562 F 38 100.00 1425 reject_low 22 ALIGNMENT 277 YS2-19h03.p1k vc_5 1297 858 4590 5025 C 440 89.32 1339 reject_low 2 ALIGNMENT 841 YS2-19h04.q1k chr10 31 1096 142530 143603 F 1066 94.37 1434 accept 0 ALIGNMENT 175 YS2-19h04.p1k chr10 772 348 146459 146876 C 425 81.88 1273 accept 0 ALIGNMENT 27 YS2-19h05.p1k chr04 321 277 124589 124633 C 45 86.67 1351 reject_low 1 ALIGNMENT 0 YS2-19h05.p1k chr04 871 531 124384 124383 C 341 0.00 1351 reject_low 1 ALIGNMENT 22 YS2-19h05.p1k chr04 530 472 124383 124441 C 59 79.66 1351 reject_low 1 ALIGNMENT 0 YS2-19h05.p1k chr04 471 322 124442 124588 C 150 0.00 1351 reject_low 1 ALIGNMENT 0 YS2-19h05.p1k chr04 276 62 124634 124633 C 215 0.00 1351 reject_low 1 ALIGNMENT 912 YS2-19h05.q1k chr04 1044 42 372912 373925 C 1003 97.51 1387 accept 0 ALIGNMENT 1027 YS2-19h05.p1k chr04 34 1196 369676 370848 F 1163 96.65 1351 accept 0 ALIGNMENT 960 YS2-19h06.q1k chr04 1140 31 372805 373926 C 1110 96.04 1446 accept 0 ALIGNMENT 0 YS2-19h06.p1k chr04 282 62 124634 124633 C 221 0.00 1375 reject_low 1 ALIGNMENT 22 YS2-19h06.p1k chr04 536 478 124383 124441 C 59 79.66 1375 reject_low 1 ALIGNMENT 991 YS2-19h06.p1k chr04 40 1177 369676 370823 F 1138 96.13 1375 accept 0 ALIGNMENT 0 YS2-19h06.p1k chr04 477 328 124442 124588 C 150 0.00 1375 reject_low 1 ALIGNMENT 0 YS2-19h06.p1k chr04 885 537 124384 124383 C 349 0.00 1375 reject_low 1 ALIGNMENT 27 YS2-19h06.p1k chr04 327 283 124589 124633 C 45 86.67 1375 reject_low 1 ALIGNMENT 36 YS2-19h07.q1k chr16 354 401 194094 194141 F 48 91.67 1468 reject_low 4 ALIGNMENT 0 YS2-19h07.q1k chr16 402 921 194141 194140 F 520 0.00 1468 reject_low 4 ALIGNMENT 0 YS2-19h07.q1k chr16 465 921 194078 194077 F 457 0.00 1468 reject_low 2 ALIGNMENT 675 YS2-19h07.q1k chr16 354 1216 194031 194900 F 863 92.58 1468 accept 0 ALIGNMENT 909 YS2-19h07.p1k chr16 1046 33 197769 198785 C 1014 98.03 1309 accept 0 ALIGNMENT 0 YS2-19h07.q1k chr16 62 416 193905 193904 F 355 0.00 1468 reject_low 3 ALIGNMENT 0 YS2-19h07.q1k chr16 465 921 194015 194014 F 457 0.00 1468 reject_low 1 ALIGNMENT 386 YS2-19h07.q1k chr16 40 464 193591 194015 F 425 97.41 1468 reject_low 1 ALIGNMENT 89 YS2-19h07.q1k chr16 354 464 193968 194078 F 111 93.69 1468 reject_low 2 ALIGNMENT 0 YS2-19h07.q1k chr16 62 353 194031 194030 F 292 0.00 1468 accept 0 ALIGNMENT 36 YS2-19h07.q1k chr16 417 464 193905 193952 F 48 91.67 1468 reject_low 3 ALIGNMENT 0 YS2-19h07.q1k chr16 465 921 193952 193951 F 457 0.00 1468 reject_low 3 ALIGNMENT 0 YS2-19h07.q1k chr16 62 353 194094 194093 F 292 0.00 1468 reject_low 4 ALIGNMENT 0 YS2-19h07.q1k chr16 62 353 193968 193967 F 292 0.00 1468 reject_low 2 ALIGNMENT 942 YS2-19h08.p1k chr07 32 1142 4969 6092 F 1111 95.77 1349 ambiguous_tel 0 ALIGNMENT 890 YS2-19h08.q1k chr11 1002 38 3989 4961 C 965 98.65 1386 ambiguous_tel 1 ALIGNMENT 1043 YS2-19h09.p1k chr15 36 1305 1028184 1029464 F 1270 95.20 1383 accept_chi 0 ALIGNMENT 943 YS2-19h09.q1k chr05 1126 53 380292 381369 C 1074 96.09 1403 accept_chi 1 ALIGNMENT 952 YS2-19h10.p1k chr01 32 1088 39995 41065 F 1057 97.54 1320 accept 0 ALIGNMENT 956 YS2-19h10.q1k chr01 1107 40 43063 44147 C 1068 97.10 1361 accept 0 ALIGNMENT 1005 YS2-19h11.q1k chr04 37 1201 711601 712773 F 1165 95.71 1498 accept 0 ALIGNMENT 930 YS2-19h11.p1k chr04 1131 33 715301 716415 C 1099 95.91 1357 accept 0 ALIGNMENT 0 YS2-19h13.q1k chr10 62 575 483558 483557 F 514 0.00 1396 reject_low 20 ALIGNMENT 213 YS2-19h13.q1k chr14 872 576 96634 96932 C 297 93.27 1396 reject_low 11 ALIGNMENT 0 YS2-19h13.q1k chr01 921 873 165852 165851 C 49 0.00 1396 reject_low 23 ALIGNMENT 195 YS2-19h13.q1k chr03 872 576 124155 124453 C 297 91.25 1396 reject_low 17 ALIGNMENT 216 YS2-19h13.q1k chr15 576 872 600412 600710 F 297 93.60 1396 reject_low 3 ALIGNMENT 32 YS2-19h13.q1k chr07 775 823 817290 817338 F 49 89.80 1396 reject_low 26 ALIGNMENT 130 YS2-19h13.q1k chr01 872 578 165851 166152 C 295 84.41 1396 reject_low 23 ALIGNMENT 0 YS2-19h13.q1k chr11 921 873 457808 457807 C 49 0.00 1396 reject_low 16 ALIGNMENT 0 YS2-19h13.q1k chr01 921 873 160264 160263 C 49 0.00 1396 reject_low 22 ALIGNMENT 190 YS2-19h13.q1k chr10 576 872 483558 483862 F 297 90.91 1396 reject_low 20 ALIGNMENT 0 YS2-19h13.q1k chr07 575 62 817721 817720 C 514 0.00 1396 reject_low 1 ALIGNMENT 216 YS2-19h13.q1k chr07 872 576 817422 817720 C 297 93.60 1396 reject_low 1 ALIGNMENT 0 YS2-19h13.q1k chr03 575 62 168920 168919 C 514 0.00 1396 reject_low 24 ALIGNMENT 213 YS2-19h13.q1k chr13 872 576 362610 362908 C 297 93.27 1396 reject_low 10 ALIGNMENT 0 YS2-19h13.q1k chr02 873 921 259883 259882 F 49 0.00 1396 reject_low 5 ALIGNMENT 0 YS2-19h13.q1k chr02 873 921 265468 265467 F 49 0.00 1396 reject_low 6 ALIGNMENT 0 YS2-19h13.q1k chr02 62 575 259585 259584 F 514 0.00 1396 reject_low 5 ALIGNMENT 0 YS2-19h13.q1k chr07 921 873 817423 817422 C 49 0.00 1396 reject_low 1 ALIGNMENT 130 YS2-19h13.q1k chr01 872 578 160263 160564 C 295 84.41 1396 reject_low 22 ALIGNMENT 210 YS2-19h13.q1k chr07 576 872 931700 931998 F 297 92.93 1396 reject_low 12 ALIGNMENT 0 YS2-19h13.q1k chr03 921 873 124156 124155 C 49 0.00 1396 reject_low 17 ALIGNMENT 0 YS2-19h13.q1k chr08 921 873 549331 549330 C 49 0.00 1396 reject_low 8 ALIGNMENT 0 YS2-19h13.q1k chr07 62 575 401971 401970 F 514 0.00 1396 reject_low 13 ALIGNMENT 953 YS2-19h13.p1k chr13 40 1128 459158 460256 F 1089 97.15 1318 accept 0 ALIGNMENT 213 YS2-19h13.q1k chr08 872 576 543634 543932 C 297 93.27 1396 reject_low 7 ALIGNMENT 0 YS2-19h13.q1k chr03 921 873 168620 168619 C 49 0.00 1396 reject_low 24 ALIGNMENT 0 YS2-19h13.q1k chr02 62 575 226633 226632 F 514 0.00 1396 reject_low 4 ALIGNMENT 0 YS2-19h13.q1k chr07 824 921 817338 817337 F 98 0.00 1396 reject_low 26 ALIGNMENT 0 YS2-19h13.q1k chr15 62 575 600412 600411 F 514 0.00 1396 reject_low 3 ALIGNMENT 0 YS2-19h13.q1k chr13 575 62 362909 362908 C 514 0.00 1396 reject_low 10 ALIGNMENT 0 YS2-19h13.q1k chr13 921 873 362611 362610 C 49 0.00 1396 reject_low 10 ALIGNMENT 0 YS2-19h13.q1k chr03 62 575 151527 151526 F 514 0.00 1396 reject_low 15 ALIGNMENT 0 YS2-19h13.q1k chr11 575 62 458106 458105 C 514 0.00 1396 reject_low 16 ALIGNMENT 216 YS2-19h13.q1k chr07 872 576 823004 823302 C 297 93.60 1396 reject_low 2 ALIGNMENT 213 YS2-19h13.q1k chr13 576 872 189761 190059 F 297 93.27 1396 reject_low 9 ALIGNMENT 0 YS2-19h13.q1k chr03 575 62 124454 124453 C 514 0.00 1396 reject_low 17 ALIGNMENT 0 YS2-19h13.q1k chr03 921 825 142820 142819 C 97 0.00 1396 reject_low 21 ALIGNMENT 0 YS2-19h13.q1k chr07 873 921 541665 541664 F 49 0.00 1396 reject_low 18 ALIGNMENT 848 YS2-19h13.q1k chr13 1119 42 462890 463978 C 1078 94.90 1396 accept 0 ALIGNMENT 0 YS2-19h13.q1k chr07 62 575 541361 541360 F 514 0.00 1396 reject_low 18 ALIGNMENT 0 YS2-19h13.q1k chr01 577 62 160565 160564 C 516 0.00 1396 reject_low 22 ALIGNMENT 0 YS2-19h13.q1k chr10 873 921 472690 472689 F 49 0.00 1396 reject_low 19 ALIGNMENT 207 YS2-19h13.q1k chr07 576 872 401971 402269 F 297 92.59 1396 reject_low 13 ALIGNMENT 0 YS2-19h13.q1k chr08 921 873 543635 543634 C 49 0.00 1396 reject_low 7 ALIGNMENT 0 YS2-19h13.q1k chr02 62 575 265170 265169 F 514 0.00 1396 reject_low 6 ALIGNMENT 183 YS2-19h13.q1k chr03 824 578 142819 143066 C 247 93.93 1396 reject_low 21 ALIGNMENT 0 YS2-19h13.q1k chr07 62 575 931700 931699 F 514 0.00 1396 reject_low 12 ALIGNMENT 0 YS2-19h13.q1k chr14 921 873 96635 96634 C 49 0.00 1396 reject_low 11 ALIGNMENT 0 YS2-19h13.q1k chr07 921 873 823005 823004 C 49 0.00 1396 reject_low 2 ALIGNMENT 0 YS2-19h13.q1k chr07 873 921 402269 402268 F 49 0.00 1396 reject_low 13 ALIGNMENT 0 YS2-19h13.q1k chr07 575 62 823303 823302 C 514 0.00 1396 reject_low 2 ALIGNMENT 0 YS2-19h13.q1k chr03 841 921 149751 149750 F 81 0.00 1396 reject_low 25 ALIGNMENT 0 YS2-19h13.q1k chr08 575 62 543933 543932 C 514 0.00 1396 reject_low 7 ALIGNMENT 77 YS2-19h13.q1k chr03 872 576 168619 168919 C 297 79.12 1396 reject_low 24 ALIGNMENT 0 YS2-19h13.q1k chr15 873 921 600710 600709 F 49 0.00 1396 reject_low 3 ALIGNMENT 190 YS2-19h13.q1k chr07 576 872 541361 541665 F 297 90.91 1396 reject_low 18 ALIGNMENT 198 YS2-19h13.q1k chr11 872 576 457807 458105 C 297 91.58 1396 reject_low 16 ALIGNMENT 0 YS2-19h13.q1k chr02 62 575 221049 221048 F 514 0.00 1396 reject_low 14 ALIGNMENT 206 YS2-19h13.q1k chr02 576 872 221049 221349 F 297 92.59 1396 reject_low 14 ALIGNMENT 0 YS2-19h13.q1k chr02 873 921 221349 221348 F 49 0.00 1396 reject_low 14 ALIGNMENT 0 YS2-19h13.q1k chr08 575 62 549629 549628 C 514 0.00 1396 reject_low 8 ALIGNMENT 206 YS2-19h13.q1k chr03 576 870 151527 151822 F 295 92.88 1396 reject_low 15 ALIGNMENT 0 YS2-19h13.q1k chr01 577 62 166153 166152 C 516 0.00 1396 reject_low 23 ALIGNMENT 0 YS2-19h13.q1k chr02 873 921 226931 226930 F 49 0.00 1396 reject_low 4 ALIGNMENT 213 YS2-19h13.q1k chr02 576 872 265170 265468 F 297 93.27 1396 reject_low 6 ALIGNMENT 0 YS2-19h13.q1k chr14 575 62 96933 96932 C 514 0.00 1396 reject_low 11 ALIGNMENT 0 YS2-19h13.q1k chr13 873 921 190059 190058 F 49 0.00 1396 reject_low 9 ALIGNMENT 0 YS2-19h13.q1k chr07 62 774 817290 817289 F 713 0.00 1396 reject_low 26 ALIGNMENT 213 YS2-19h13.q1k chr08 872 576 549330 549628 C 297 93.27 1396 reject_low 8 ALIGNMENT 213 YS2-19h13.q1k chr02 576 872 226633 226931 F 297 93.27 1396 reject_low 4 ALIGNMENT 0 YS2-19h13.q1k chr10 62 575 472386 472385 F 514 0.00 1396 reject_low 19 ALIGNMENT 213 YS2-19h13.q1k chr02 576 872 259585 259883 F 297 93.27 1396 reject_low 5 ALIGNMENT 0 YS2-19h13.q1k chr10 873 921 483862 483861 F 49 0.00 1396 reject_low 20 ALIGNMENT 0 YS2-19h13.q1k chr03 577 62 143067 143066 C 516 0.00 1396 reject_low 21 ALIGNMENT 70 YS2-19h13.q1k chr03 617 840 149531 149751 F 224 81.70 1396 reject_low 25 ALIGNMENT 0 YS2-19h13.q1k chr03 62 616 149531 149530 F 555 0.00 1396 reject_low 25 ALIGNMENT 0 YS2-19h13.q1k chr07 873 921 931998 931997 F 49 0.00 1396 reject_low 12 ALIGNMENT 0 YS2-19h13.q1k chr13 62 575 189761 189760 F 514 0.00 1396 reject_low 9 ALIGNMENT 0 YS2-19h13.q1k chr03 871 921 151822 151821 F 51 0.00 1396 reject_low 15 ALIGNMENT 190 YS2-19h13.q1k chr10 576 872 472386 472690 F 297 90.91 1396 reject_low 19 ALIGNMENT 1016 YS2-19h14.q1k chr15 1173 32 440712 441860 C 1142 96.67 1431 accept 0 ALIGNMENT 429 YS2-19h14.p1k chr15 31 620 436619 437211 F 590 93.05 1321 accept 0 ALIGNMENT 1051 YS2-19h15.q1k chr12 1320 51 800901 802171 C 1270 94.65 1516 accept 0 ALIGNMENT 992 YS2-19h15.p1k chr12 32 1186 797729 798902 F 1155 96.45 1330 accept 0 ALIGNMENT 1022 YS2-19h17.p1k chr10 1185 37 650548 651709 C 1149 97.30 1312 accept 0 ALIGNMENT 934 YS2-19h17.q1k chr10 39 1112 645256 646344 F 1074 96.65 1360 accept 0 ALIGNMENT 990 YS2-19h18.q1k chr02 1178 41 170001 171154 C 1138 97.28 1394 accept 0 ALIGNMENT 1021 YS2-19h18.p1k chr02 31 1138 164826 165929 F 1108 98.29 1378 accept 0 ALIGNMENT 1032 YS2-19h19.p1k chr07 1296 31 420629 421912 C 1266 95.02 1343 accept 0 ALIGNMENT 979 YS2-19h19.q1k chr07 37 1150 417656 418780 F 1114 96.68 1395 accept 0 ALIGNMENT 1070 YS2-19h20.p1k chr16 1245 30 432673 433894 C 1216 95.97 1355 accept 0 ALIGNMENT 1046 YS2-19h20.q1k chr16 40 1262 431785 433014 F 1223 95.58 1435 accept 0 ALIGNMENT 33 YS2-19h22.q1k vc_5 980 945 1 36 C 36 97.22 1385 reject_low 23 ALIGNMENT 108 YS2-19h22.q1k vc_2 983 1258 2164 2442 F 276 81.52 1385 reject_low 10 ALIGNMENT 84 YS2-19h22.q1k vc_4 1071 983 1446 1534 C 89 98.88 1385 reject_low 14 ALIGNMENT 869 YS2-19h22.q1k chr07 42 944 519436 520338 F 903 99.11 1385 accept_chi 1 ALIGNMENT 0 YS2-19h22.q1k vc_3 62 982 2531 2530 F 921 0.00 1385 reject_low 11 ALIGNMENT 108 YS2-19h22.q1k vc_3 983 1258 2531 2809 F 276 81.52 1385 reject_low 11 ALIGNMENT 0 YS2-19h22.p1k vc_1 944 62 2473 2472 C 883 0.00 1299 reject_low 15 ALIGNMENT 134 YS2-19h22.p1k vc_7 945 1200 13562 13811 F 256 87.11 1299 reject_low 8 ALIGNMENT 0 YS2-19h22.p1k vc_5 944 62 5026 5025 C 883 0.00 1299 reject_low 2 ALIGNMENT 0 YS2-19h22.p1k vc_3 944 62 2106 2105 C 883 0.00 1299 reject_low 6 ALIGNMENT 0 YS2-19h22.q1k vc_4 982 62 1535 1534 C 921 0.00 1385 reject_low 14 ALIGNMENT 0 YS2-19h22.q1k vc_5 944 62 37 36 C 883 0.00 1385 reject_low 23 ALIGNMENT 108 YS2-19h22.q1k vc_7 1243 983 2465 2727 C 261 81.99 1385 reject_low 3 ALIGNMENT 0 YS2-19h22.p1k vc_4 62 944 5871 5870 F 883 0.00 1299 reject_low 7 ALIGNMENT 0 YS2-19h22.q1k vc_7 62 945 13525 13524 F 884 0.00 1385 reject_low 22 ALIGNMENT 0 YS2-19h22.p1k vc_3 944 62 2473 2472 C 883 0.00 1299 reject_low 16 ALIGNMENT 134 YS2-19h22.p1k vc_2 1200 945 1856 2105 C 256 87.11 1299 reject_low 5 ALIGNMENT 36 YS2-19h22.q1k vc_5 983 945 5025 5063 C 39 97.44 1385 reject_low 21 ALIGNMENT 39 YS2-19h22.q1k vc_1 983 942 2472 2513 C 42 97.62 1385 reject_low 18 ALIGNMENT 0 YS2-19h22.q1k vc_2 62 982 2164 2163 F 921 0.00 1385 reject_low 10 ALIGNMENT 0 YS2-19h22.q1k vc_7 982 62 2728 2727 C 921 0.00 1385 reject_low 3 ALIGNMENT 0 YS2-19h22.p1k vc_7 62 944 100 99 F 883 0.00 1299 reject_low 3 ALIGNMENT 0 YS2-19h22.q1k vc_4 62 982 126 125 F 921 0.00 1385 reject_low 13 ALIGNMENT 103 YS2-19h22.q1k vc_4 1258 983 5532 5812 C 276 81.16 1385 reject_low 12 ALIGNMENT 0 YS2-19h22.q1k vc_4 62 941 5830 5829 F 880 0.00 1385 reject_low 17 ALIGNMENT 0 YS2-19h22.q1k vc_4 984 983 5872 6353 F 0 0.00 1385 reject_low 17 ALIGNMENT 39 YS2-19h22.q1k vc_2 983 942 2105 2146 C 42 97.62 1385 reject_low 19 ALIGNMENT 134 YS2-19h22.p1k vc_4 945 1200 5871 6120 F 256 87.11 1299 reject_low 7 ALIGNMENT 96 YS2-19h22.q1k vc_4 983 1140 6353 6509 F 158 88.61 1385|1,0 reject_low 17 ALIGNMENT 0 YS2-19h22.p1k vc_7 62 944 13562 13561 F 883 0.00 1299 reject_low 8 ALIGNMENT 0 YS2-19h22.q1k vc_3 941 62 2514 2513 C 880 0.00 1385 reject_low 20 ALIGNMENT 35 YS2-19h22.q1k vc_7 946 983 13525 13562 F 38 97.37 1385 reject_low 22 ALIGNMENT 108 YS2-19h22.q1k vc_5 983 1258 2398 2676 F 276 81.52 1385 reject_low 2 ALIGNMENT 134 YS2-19h22.p1k vc_1 1200 945 1856 2105 C 256 87.11 1299 reject_low 4 ALIGNMENT 26 YS2-19h22.p1k vc_3 975 945 2441 2472 C 31 96.77 1299 reject_low 16 ALIGNMENT 0 YS2-19h22.p1k vc_2 944 62 2106 2105 C 883 0.00 1299 reject_low 5 ALIGNMENT 0 YS2-19h22.p1k vc_1 944 62 2106 2105 C 883 0.00 1299 reject_low 4 ALIGNMENT 96 YS2-19h22.q1k vc_4 983 1140 126 282 F 158 88.61 1385 reject_low 13 ALIGNMENT 0 YS2-19h22.q1k vc_5 944 62 5064 5063 C 883 0.00 1385 reject_low 21 ALIGNMENT 0 YS2-19h22.q1k vc_1 941 62 2514 2513 C 880 0.00 1385 reject_low 18 ALIGNMENT 0 YS2-19h22.q1k vc_2 941 62 2147 2146 C 880 0.00 1385 reject_low 19 ALIGNMENT 108 YS2-19h22.q1k vc_1 983 1258 2531 2809 F 276 81.52 1385 reject_low 9 ALIGNMENT 39 YS2-19h22.q1k vc_4 942 983 5830 5871 F 42 97.62 1385 reject_low 17 ALIGNMENT 870 YS2-19h22.p1k chr07 926 20 519432 520341 C 907 99.12 1299 accept_chi 0 ALIGNMENT 0 YS2-19h22.q1k vc_5 62 982 2398 2397 F 921 0.00 1385 reject_low 2 ALIGNMENT 0 YS2-19h22.q1k vc_4 982 62 5813 5812 C 921 0.00 1385 reject_low 12 ALIGNMENT 26 YS2-19h22.p1k vc_1 975 945 2441 2472 C 31 96.77 1299 reject_low 15 ALIGNMENT 134 YS2-19h22.p1k vc_3 1200 945 1856 2105 C 256 87.11 1299 reject_low 6 ALIGNMENT 134 YS2-19h22.p1k vc_5 1200 945 4776 5025 C 256 87.11 1299 reject_low 2 ALIGNMENT 134 YS2-19h22.p1k vc_7 945 1200 100 349 F 256 87.11 1299 reject_low 3 ALIGNMENT 39 YS2-19h22.q1k vc_3 983 942 2472 2513 C 42 97.62 1385 reject_low 20 ALIGNMENT 0 YS2-19h22.q1k vc_1 62 982 2531 2530 F 921 0.00 1385 reject_low 9 ALIGNMENT 152 YS2-19h23.p1k chr15 61 341 1082912 1083193 F 281 85.05 1295 reject_low 18 ALIGNMENT 164 YS2-19h23.p1k chr01 356 61 1804 2100 C 296 85.47 1295 reject_low 13 ALIGNMENT 874 YS2-19h23.p1k chr06 1212 61 98383 99518 C 1152 94.01 1295 accept 0 ALIGNMENT 0 YS2-19h23.p1k chr07 357 836 1080677 1080676 F 480 0.00 1295 reject_low 5 ALIGNMENT 0 YS2-19h23.p1k chr01 836 356 176652 176651 C 481 0.00 1295 reject_low 2 ALIGNMENT 167 YS2-19h23.p1k chr15 356 61 11545 11841 C 296 85.81 1295 reject_low 12 ALIGNMENT 175 YS2-19h23.p1k chr12 65 353 1062989 1063278 F 289 87.20 1295 reject_low 9 ALIGNMENT 0 YS2-19h23.p1k chr15 836 357 11546 11545 C 480 0.00 1295 reject_low 12 ALIGNMENT 182 YS2-19h23.p1k chr05 61 356 63797 64093 F 296 87.50 1295 reject_low 3 ALIGNMENT 0 YS2-19h23.p1k chr08 836 357 11919 11918 C 480 0.00 1295 reject_low 7 ALIGNMENT 0 YS2-19h23.p1k chr09 342 836 434284 434283 F 495 0.00 1295 reject_low 17 ALIGNMENT 0 YS2-19h23.p1k chr11 836 357 1809 1808 C 480 0.00 1295 reject_low 8 ALIGNMENT 175 YS2-19h23.p1k chr12 62 341 94825 95105 F 280 87.86 1295 reject_low 10 ALIGNMENT 173 YS2-19h23.p1k chr02 61 378 809120 809438 F 318 85.22 1295 reject_low 1 ALIGNMENT 0 YS2-19h23.p1k chr01 836 357 1805 1804 C 480 0.00 1295 reject_low 13 ALIGNMENT 981 YS2-19h23.q1k chr06 30 1178 95257 96405 F 1149 96.08 1303 accept 0 ALIGNMENT 179 YS2-19h23.p1k chr07 61 356 1080381 1080677 F 296 87.16 1295 reject_low 5 ALIGNMENT 163 YS2-19h23.p1k chr14 61 353 781987 782280 F 293 85.67 1295 reject_low 16 ALIGNMENT 169 YS2-19h23.p1k chr12 341 62 222701 222981 C 280 87.14 1295 reject_low 14 ALIGNMENT 173 YS2-19h23.p1k chr11 356 61 1808 2104 C 296 86.49 1295 reject_low 8 ALIGNMENT 0 YS2-19h23.p1k chr14 354 836 782280 782279 F 483 0.00 1295 reject_low 16 ALIGNMENT 0 YS2-19h23.p1k chr12 836 354 13084 13083 C 483 0.00 1295 reject_low 15 ALIGNMENT 158 YS2-19h23.p1k chr09 61 341 434003 434284 F 281 85.77 1295 reject_low 17 ALIGNMENT 152 YS2-19h23.p1k chr16 341 61 7948 8229 C 281 85.05 1295 reject_low 19 ALIGNMENT 252 YS2-19h23.p1k chr01 355 62 176651 176945 C 294 95.58 1295 reject_low 2 ALIGNMENT 0 YS2-19h23.p1k chr02 836 354 7606 7605 C 483 0.00 1295 reject_low 11 ALIGNMENT 0 YS2-19h23.p1k chr13 342 836 922998 922997 F 495 0.00 1295 reject_low 20 ALIGNMENT 0 YS2-19h23.p1k chr15 342 836 1083193 1083192 F 495 0.00 1295 reject_low 18 ALIGNMENT 0 YS2-19h23.p1k chr07 836 357 6288 6287 C 480 0.00 1295 reject_low 4 ALIGNMENT 173 YS2-19h23.p1k chr04 61 356 1523301 1523597 F 296 86.49 1295 reject_low 6 ALIGNMENT 169 YS2-19h23.p1k chr02 353 61 7605 7898 C 293 86.35 1295 reject_low 11 ALIGNMENT 0 YS2-19h23.p1k chr16 836 342 7949 7948 C 495 0.00 1295 reject_low 19 ALIGNMENT 173 YS2-19h23.p1k chr08 356 61 11918 12214 C 296 86.49 1295 reject_low 7 ALIGNMENT 0 YS2-19h23.p1k chr02 379 836 809438 809437 F 458 0.00 1295 reject_low 1 ALIGNMENT 0 YS2-19h23.p1k chr12 354 836 1063278 1063277 F 483 0.00 1295 reject_low 9 ALIGNMENT 0 YS2-19h23.p1k chr05 357 836 64093 64092 F 480 0.00 1295 reject_low 3 ALIGNMENT 179 YS2-19h23.p1k chr07 356 61 6287 6583 C 296 87.16 1295 reject_low 4 ALIGNMENT 0 YS2-19h23.p1k chr04 357 836 1523597 1523596 F 480 0.00 1295 reject_low 6 ALIGNMENT 0 YS2-19h23.p1k chr12 836 342 222702 222701 C 495 0.00 1295 reject_low 14 ALIGNMENT 149 YS2-19h23.p1k chr13 61 341 922717 922998 F 281 84.70 1295 reject_low 20 ALIGNMENT 163 YS2-19h23.p1k chr12 353 61 13083 13376 C 293 85.67 1295 reject_low 15 ALIGNMENT 0 YS2-19h23.p1k chr12 342 836 95105 95104 F 495 0.00 1295 reject_low 10 ALIGNMENT 93 YS2-19h24.p1k chr09 742 320 213513 213931 C 423 75.41 1448 accept 0 ALIGNMENT 837 YS2-19i01.p1k chr08 1171 33 359988 361117 C 1139 93.42 1263 accept 0 ALIGNMENT 880 YS2-19i01.q1k chr08 33 1149 359918 361045 F 1117 94.54 1347 accept 0 ALIGNMENT 977 YS2-19i02.q1k chr09 1142 33 314311 315435 C 1110 96.40 1372 accept 0 ALIGNMENT 913 YS2-19i02.p1k chr09 35 1073 309760 310808 F 1039 96.82 1243 accept 0 ALIGNMENT 1042 YS2-19i03.p1k chr14 30 1250 487522 488754 F 1221 95.82 1277 accept 0 ALIGNMENT 999 YS2-19i03.q1k chr14 1183 31 489336 490495 C 1153 96.44 1401 accept 0 ALIGNMENT 658 YS2-19i04.q1k chr09 979 40 314493 315435 C 940 90.53 1379 accept 0 ALIGNMENT 1011 YS2-19i05.p1k chr12 30 1177 136253 137415 F 1148 96.95 1293 accept 0 ALIGNMENT 894 YS2-19i05.q1k chr12 1098 41 139900 140977 C 1058 96.98 1370 accept 0 ALIGNMENT 988 YS2-19i06.p1k chr12 54 1257 136253 137462 F 1204 95.27 1387 accept 0 ALIGNMENT 900 YS2-19i06.q1k chr12 1048 39 139963 140977 C 1010 98.42 1389 accept 0 ALIGNMENT 211 YS2-19i09.q1k vc_1 1 302 2689 2991 F 302 90.73 704 reject_vc 4 ALIGNMENT 394 YS2-19i09.p1k chr16 34 475 93595 94036 F 442 97.51 492 accept 0 ALIGNMENT 232 YS2-19i09.q1k vc_7 354 1 2214 2569 C 354 89.27 704 reject_vc 3 ALIGNMENT 211 YS2-19i09.q1k vc_2 1 302 2322 2624 F 302 90.73 704 reject_vc 5 ALIGNMENT 211 YS2-19i09.q1k vc_3 1 302 2689 2991 F 302 90.73 704 reject_vc 6 ALIGNMENT 0 YS2-19i09.q1k vc_7 53 54 5172 6360 C 0 0.00 704 reject_vc 7 ALIGNMENT 247 YS2-19i09.q1k vc_5 1 467 2556 3034 F 467 86.08 704 reject_vc 1 ALIGNMENT 156 YS2-19i09.q1k vc_7 302 53 4922 5172 C 250 88.40 704|0,1 reject_vc 7 ALIGNMENT 0 YS2-19i09.p1k chr16 476 492 94036 94035 F 17 0.00 492 accept 0 ALIGNMENT 51 YS2-19i09.q1k vc_7 54 3 6360 6411 C 52 100.00 704|1,0 reject_vc 7 ALIGNMENT 237 YS2-19i09.q1k vc_4 375 1 5276 5654 C 375 88.53 704 reject_vc 2 ALIGNMENT 239 YS2-19i10.q1k vc_2 1 289 2322 2613 F 289 94.81 683 reject_low 9 ALIGNMENT 193 YS2-19i10.p1k vc_6 1 337 3712 4061 F 337 87.83 513 reject_low 5 ALIGNMENT 239 YS2-19i10.q1k vc_1 1 289 2689 2980 F 289 94.81 683 reject_low 8 ALIGNMENT 245 YS2-19i10.q1k vc_7 359 1 2196 2569 C 359 90.81 683 reject_vc 1 ALIGNMENT 184 YS2-19i10.q1k vc_7 289 53 4933 5172 C 237 93.25 683|0,1 reject_low 11 ALIGNMENT 193 YS2-19i10.p1k vc_2 337 1 1400 1749 C 337 87.83 513 reject_low 3 ALIGNMENT 193 YS2-19i10.p1k vc_1 337 1 1400 1749 C 337 87.83 513 reject_low 2 ALIGNMENT 239 YS2-19i10.q1k vc_3 1 289 2689 2980 F 289 94.81 683 reject_low 10 ALIGNMENT 193 YS2-19i10.p1k vc_7 1 337 13918 14267 F 337 87.83 513 reject_low 6 ALIGNMENT 35 YS2-19i10.q1k vc_4 289 243 6285 6333 C 47 93.62 683 reject_low 14 ALIGNMENT 193 YS2-19i10.p1k vc_7 1 337 456 805 F 337 87.83 513 reject_vc 1 ALIGNMENT 245 YS2-19i10.q1k vc_5 1 359 2556 2929 F 359 90.81 683 reject_vc 0 ALIGNMENT 35 YS2-19i10.q1k vc_4 243 289 1554 1602 F 47 93.62 683 reject_low 13 ALIGNMENT 51 YS2-19i10.q1k vc_7 54 3 6360 6411 C 52 100.00 683|1,0 reject_low 11 ALIGNMENT 193 YS2-19i10.p1k vc_5 337 1 4320 4669 C 337 87.83 513 reject_vc 0 ALIGNMENT 35 YS2-19i10.q1k vc_4 289 243 58 106 C 47 93.62 683 reject_low 12 ALIGNMENT 0 YS2-19i10.q1k vc_7 53 54 5172 6360 C 0 0.00 683 reject_low 11 ALIGNMENT 238 YS2-19i10.q1k vc_4 359 1 5279 5654 C 359 90.25 683 reject_low 7 ALIGNMENT 193 YS2-19i10.p1k vc_3 337 1 1400 1749 C 337 87.83 513 reject_low 4 ALIGNMENT 652 YS2-19i11.q1k chr12 1162 40 232831 233957 C 1123 86.91 1396 reject_low 1 ALIGNMENT 136 YS2-19i11.q1k chr07 429 42 652471 652858 C 388 78.87 1396 reject_low 2 ALIGNMENT 1047 YS2-19i11.p1k chr12 1253 38 414808 416038 C 1216 96.71 1296 accept 0 ALIGNMENT 0 YS2-19i11.q1k chr07 860 430 652472 652471 C 431 0.00 1396 reject_low 2 ALIGNMENT 1019 YS2-19i11.q1k chr12 40 1224 410849 412042 F 1185 95.95 1396 accept 0 ALIGNMENT 130 YS2-19i12.q1k chr07 424 37 652471 652858 C 388 78.35 1407 reject_low 2 ALIGNMENT 991 YS2-19i12.q1k chr12 35 1144 410849 411972 F 1110 97.39 1407 accept 0 ALIGNMENT 642 YS2-19i12.q1k chr12 1101 35 232885 233957 C 1067 87.44 1407 reject_low 1 ALIGNMENT 0 YS2-19i12.q1k chr07 876 425 652472 652471 C 452 0.00 1407 reject_low 2 ALIGNMENT 1024 YS2-19i12.p1k chr12 1256 34 414808 416038 C 1223 95.58 1350 accept 0 ALIGNMENT 205 YS2-19i13.q1k chr04 92 428 350675 351009 F 337 89.32 1446 accept 0 ALIGNMENT 0 YS2-19i14.q1k vc_7 62 281 13525 13524 F 220 0.00 319 reject_low 13 ALIGNMENT 0 YS2-19i14.q1k vc_5 276 62 41 40 C 215 0.00 319 reject_low 14 ALIGNMENT 37 YS2-19i14.q1k vc_5 316 277 1 40 C 40 97.50 319 reject_low 14 ALIGNMENT 385 YS2-19i14.p1k vc_1 586 1 1147 1749 C 586 89.76 696 reject_vc 2 ALIGNMENT 385 YS2-19i14.p1k vc_2 586 1 1147 1749 C 586 89.76 696 reject_vc 3 ALIGNMENT 0 YS2-19i14.q1k chr02 319 280 520139 520138 C 40 0.00 319 accept 0 ALIGNMENT 0 YS2-19i14.q1k vc_3 278 62 2513 2512 C 217 0.00 319 reject_low 10 ALIGNMENT 41 YS2-19i14.q1k vc_2 319 279 2105 2145 C 41 100.00 319 reject_low 9 ALIGNMENT 382 YS2-19i14.p1k vc_7 1 586 13918 14520 F 586 89.59 696 reject_vc 6 ALIGNMENT 383 YS2-19i14.p1k vc_6 1 541 3712 4267 F 541 91.50 696 reject_vc 7 ALIGNMENT 41 YS2-19i14.q1k vc_3 319 279 2472 2512 C 41 100.00 319 reject_low 10 ALIGNMENT 236 YS2-19i14.q1k chr02 279 38 520138 520379 C 242 100.00 319 accept 0 ALIGNMENT 0 YS2-19i14.q1k vc_4 62 278 5831 5830 F 217 0.00 319 reject_low 11 ALIGNMENT 41 YS2-19i14.q1k vc_1 319 279 2472 2512 C 41 100.00 319 reject_low 8 ALIGNMENT 385 YS2-19i14.p1k vc_3 586 1 1147 1749 C 586 89.76 696 reject_vc 4 ALIGNMENT 382 YS2-19i14.p1k vc_7 1 586 456 1058 F 586 89.59 696 reject_vc 5 ALIGNMENT 0 YS2-19i14.q1k vc_2 278 62 2146 2145 C 217 0.00 319 reject_low 9 ALIGNMENT 38 YS2-19i14.q1k vc_7 282 319 13525 13562 F 38 100.00 319 reject_low 13 ALIGNMENT 40 YS2-19i14.q1k vc_5 319 277 5025 5067 C 43 97.67 319 reject_low 12 ALIGNMENT 41 YS2-19i14.q1k vc_4 279 319 5831 5871 F 41 100.00 319 reject_low 11 ALIGNMENT 388 YS2-19i14.p1k vc_5 586 1 4067 4669 C 586 89.93 696 reject_vc 1 ALIGNMENT 0 YS2-19i14.q1k vc_1 278 62 2513 2512 C 217 0.00 319 reject_low 8 ALIGNMENT 0 YS2-19i14.q1k vc_5 276 62 5068 5067 C 215 0.00 319 reject_low 12 ALIGNMENT 996 YS2-19i16.q1k chr02 1160 38 372890 374026 C 1123 96.71 1398 accept 0 ALIGNMENT 1019 YS2-19i16.p1k chr02 31 1205 369388 370575 F 1175 97.02 1325 accept 0 ALIGNMENT 985 YS2-19i17.p1k chr14 1280 33 576739 577999 C 1248 94.39 1310 accept 0 ALIGNMENT 131 YS2-19i17.p1k chr02 977 1256 255371 255646 F 280 83.93 1310 reject_low 2 ALIGNMENT 975 YS2-19i17.q1k chr14 29 1212 572667 573853 F 1184 94.93 1394 accept 0 ALIGNMENT 0 YS2-19i17.p1k chr02 92 976 255371 255370 F 885 0.00 1310 reject_low 2 ALIGNMENT 987 YS2-19i17.q1k chr14 1212 29 598378 599564 C 1184 95.10 1394 reject_low 1 ALIGNMENT 978 YS2-19i20.q1k chr12 37 1128 161214 162316 F 1092 97.34 1331 accept 0 ALIGNMENT 975 YS2-19i20.p1k chr12 1115 29 163834 164934 C 1087 97.88 1299 accept 0 ALIGNMENT 979 YS2-19i21.p1k chr08 42 1199 453182 454348 F 1158 96.03 1223 accept 0 ALIGNMENT 1010 YS2-19i21.q1k chr08 1213 30 456433 457607 C 1184 96.11 1312 accept 0 ALIGNMENT 1018 YS2-19i22.q1k chr14 37 1238 125687 126902 F 1202 96.26 1340 accept 0 ALIGNMENT 967 YS2-19i22.p1k chr14 1275 34 128696 129916 C 1242 94.69 1292 accept 0 ALIGNMENT 0 YS2-19i23.q1k vc_4 62 186 5831 5830 F 125 0.00 227 reject_low 3 ALIGNMENT 0 YS2-19i23.q1k vc_5 188 62 37 36 C 127 0.00 227 reject_low 6 ALIGNMENT 38 YS2-19i23.q1k vc_7 190 227 13525 13562 F 38 100.00 227 reject_low 5 ALIGNMENT 136 YS2-19i23.q1k chr07 186 41 631671 631815 C 146 99.32 227 accept 0 ALIGNMENT 0 YS2-19i23.q1k vc_3 186 62 2513 2512 C 125 0.00 227 reject_low 2 ALIGNMENT 41 YS2-19i23.q1k vc_3 227 187 2472 2512 C 41 100.00 227 reject_low 2 ALIGNMENT 0 YS2-19i23.q1k vc_1 186 62 2513 2512 C 125 0.00 227 reject_low 1 ALIGNMENT 41 YS2-19i23.q1k vc_1 227 187 2472 2512 C 41 100.00 227 reject_low 1 ALIGNMENT 0 YS2-19i23.q1k vc_5 188 62 5064 5063 C 127 0.00 227 reject_low 4 ALIGNMENT 39 YS2-19i23.q1k vc_5 227 189 5025 5063 C 39 100.00 227 reject_low 4 ALIGNMENT 36 YS2-19i23.q1k vc_5 224 189 1 36 C 36 100.00 227 reject_low 6 ALIGNMENT 0 YS2-19i23.q1k vc_7 62 189 13525 13524 F 128 0.00 227 reject_low 5 ALIGNMENT 0 YS2-19i23.q1k chr07 227 187 631672 631671 C 41 0.00 227 accept 0 ALIGNMENT 41 YS2-19i23.q1k vc_4 187 227 5831 5871 F 41 100.00 227 reject_low 3 ALIGNMENT 894 YS2-19i24.p1k chr04 35 1176 919711 920843 F 1142 94.57 1256 accept 0 ALIGNMENT 0 YS2-19j01.p1k chr07 501 483 520652 520651 C 19 0.00 501 accept 0 ALIGNMENT 226 YS2-19j01.q1k vc_4 342 1 5309 5654 C 342 89.77 665 reject_vc 3 ALIGNMENT 223 YS2-19j01.q1k vc_2 1 297 2322 2618 F 297 92.59 665 reject_vc 5 ALIGNMENT 427 YS2-19j01.p1k chr07 482 39 520651 521094 C 444 99.55 501 accept 0 ALIGNMENT 167 YS2-19j01.q1k vc_7 297 53 4928 5172 C 245 90.61 665|0,1 reject_vc 7 ALIGNMENT 0 YS2-19j01.q1k vc_7 53 54 5172 6360 C 0 0.00 665 reject_vc 7 ALIGNMENT 233 YS2-19j01.q1k vc_7 342 1 2226 2569 C 342 90.35 665 reject_vc 2 ALIGNMENT 233 YS2-19j01.q1k vc_5 1 342 2556 2899 F 342 90.35 665 reject_vc 1 ALIGNMENT 51 YS2-19j01.q1k vc_7 54 3 6360 6411 C 52 100.00 665|1,0 reject_vc 7 ALIGNMENT 223 YS2-19j01.q1k vc_3 1 297 2689 2985 F 297 92.59 665 reject_vc 6 ALIGNMENT 223 YS2-19j01.q1k vc_1 1 297 2689 2985 F 297 92.59 665 reject_vc 4 ALIGNMENT 0 YS2-19j02.p1k vc_3 890 62 2473 2472 C 829 0.00 1290 reject_low 9 ALIGNMENT 766 YS2-19j02.p1k chr05 33 871 541986 542824 F 839 99.17 1290 accept 0 ALIGNMENT 26 YS2-19j02.p1k vc_3 921 891 2441 2472 C 31 96.77 1290 reject_low 9 ALIGNMENT 0 YS2-19j02.p1k vc_5 890 62 5026 5025 C 829 0.00 1290 reject_low 5 ALIGNMENT 764 YS2-19j02.q1k chr05 867 31 541988 542824 C 837 99.16 867 accept 0 ALIGNMENT 223 YS2-19j02.p1k vc_2 1229 891 1757 2105 C 339 89.97 1290 reject_low 2 ALIGNMENT 223 YS2-19j02.p1k vc_4 891 1229 5871 6219 F 339 89.97 1290 reject_low 4 ALIGNMENT 223 YS2-19j02.p1k vc_7 891 1229 100 448 F 339 89.97 1290 reject_low 6 ALIGNMENT 223 YS2-19j02.p1k vc_1 1229 891 1757 2105 C 339 89.97 1290 reject_low 1 ALIGNMENT 0 YS2-19j02.p1k vc_1 890 62 2106 2105 C 829 0.00 1290 reject_low 1 ALIGNMENT 0 YS2-19j02.p1k vc_4 62 890 5871 5870 F 829 0.00 1290 reject_low 4 ALIGNMENT 223 YS2-19j02.p1k vc_3 1229 891 1757 2105 C 339 89.97 1290 reject_low 3 ALIGNMENT 223 YS2-19j02.p1k vc_5 1229 891 4677 5025 C 339 89.97 1290 reject_low 5 ALIGNMENT 0 YS2-19j02.p1k vc_7 62 890 13562 13561 F 829 0.00 1290 reject_low 7 ALIGNMENT 223 YS2-19j02.p1k vc_7 891 1229 13562 13910 F 339 89.97 1290 reject_low 7 ALIGNMENT 26 YS2-19j02.p1k vc_1 921 891 2441 2472 C 31 96.77 1290 reject_low 8 ALIGNMENT 0 YS2-19j02.p1k vc_2 890 62 2106 2105 C 829 0.00 1290 reject_low 2 ALIGNMENT 0 YS2-19j02.p1k chr05 872 898 542824 542823 F 27 0.00 1290 accept 0 ALIGNMENT 0 YS2-19j02.p1k vc_7 62 890 100 99 F 829 0.00 1290 reject_low 6 ALIGNMENT 0 YS2-19j02.p1k vc_1 890 62 2473 2472 C 829 0.00 1290 reject_low 8 ALIGNMENT 0 YS2-19j02.p1k vc_3 890 62 2106 2105 C 829 0.00 1290 reject_low 3 ALIGNMENT 154 YS2-19j03.p1k chr16 190 32 781778 781936 C 159 99.37 209 accept 0 ALIGNMENT 0 YS2-19j03.p1k chr16 209 191 781779 781778 C 19 0.00 209 accept 0 ALIGNMENT 0 YS2-19j03.p1k chr16 209 170 777350 777349 C 40 0.00 209 reject_low 1 ALIGNMENT 84 YS2-19j03.p1k chr16 169 32 777349 777489 C 138 88.41 209 reject_low 1 ALIGNMENT 0 YS2-19j04.q1k vc_7 62 233 13525 13524 F 172 0.00 271 reject_low 7 ALIGNMENT 0 YS2-19j04.q1k vc_1 230 62 2513 2512 C 169 0.00 271 reject_low 2 ALIGNMENT 0 YS2-19j04.q1k vc_2 230 62 2146 2145 C 169 0.00 271 reject_low 3 ALIGNMENT 0 YS2-19j04.q1k chr04 271 231 1305412 1305411 C 41 0.00 271 accept_chi 0 ALIGNMENT 36 YS2-19j04.q1k vc_5 268 233 1 36 C 36 100.00 271 reject_low 8 ALIGNMENT 173 YS2-19j04.q1k chr04 230 41 1305411 1305600 C 190 98.42 271 accept_chi 0 ALIGNMENT 41 YS2-19j04.q1k vc_1 271 231 2472 2512 C 41 100.00 271 reject_low 2 ALIGNMENT 172 YS2-19j04.p1k chr04 56 247 1305411 1305602 F 192 97.92 254 accept_chi 1 ALIGNMENT 39 YS2-19j04.q1k vc_5 271 233 5025 5063 C 39 100.00 271 reject_low 6 ALIGNMENT 0 YS2-19j04.q1k vc_5 232 62 37 36 C 171 0.00 271 reject_low 8 ALIGNMENT 41 YS2-19j04.q1k vc_2 271 231 2105 2145 C 41 100.00 271 reject_low 3 ALIGNMENT 0 YS2-19j04.q1k vc_5 232 62 5064 5063 C 171 0.00 271 reject_low 6 ALIGNMENT 41 YS2-19j04.q1k vc_3 271 231 2472 2512 C 41 100.00 271 reject_low 4 ALIGNMENT 41 YS2-19j04.q1k vc_4 231 271 5831 5871 F 41 100.00 271 reject_low 5 ALIGNMENT 0 YS2-19j04.q1k vc_3 230 62 2513 2512 C 169 0.00 271 reject_low 4 ALIGNMENT 0 YS2-19j04.q1k vc_4 62 230 5831 5830 F 169 0.00 271 reject_low 5 ALIGNMENT 38 YS2-19j04.q1k vc_7 234 271 13525 13562 F 38 100.00 271 reject_low 7 ALIGNMENT 900 YS2-19j05.q1k chr13 1116 32 93583 94681 C 1085 95.39 1360 accept 0 ALIGNMENT 924 YS2-19j05.p1k chr13 34 1176 88778 89931 F 1143 95.01 1321 accept 0 ALIGNMENT 917 YS2-19j06.p1k chr11 1134 33 197992 199125 C 1102 95.83 1320 accept_chi 1 ALIGNMENT 767 YS2-19j06.q1k chr11 39 917 103009 103885 F 879 96.25 1370 accept_chi 0 ALIGNMENT 333 YS2-19j06.p1k chr13 33 984 487629 488585 F 952 79.20 1320 reject_low 2 ALIGNMENT 993 YS2-19j09.q1k chr11 40 1236 338085 339271 F 1197 96.07 1470 accept 0 ALIGNMENT 1002 YS2-19j09.p1k chr11 1176 31 341321 342486 C 1146 97.12 1346 accept 0 ALIGNMENT 310 YS2-19j10.q1k chr15 41 494 586 1039 F 454 91.85 1498 reject_low 10 ALIGNMENT 0 YS2-19j10.q1k chr03 906 495 315588 315587 C 412 0.00 1498 reject_low 11 ALIGNMENT 257 YS2-19j10.q1k chr15 498 44 1083721 1084177 C 455 87.91 1498 reject_low 13 ALIGNMENT 0 YS2-19j10.q1k chr02 906 356 812324 812323 C 551 0.00 1498 reject_low 20 ALIGNMENT 0 YS2-19j10.q1k chr08 355 906 5554 5553 F 552 0.00 1498 reject_low 17 ALIGNMENT 257 YS2-19j10.q1k chr03 41 383 836 1178 F 343 94.17 1498 reject_low 15 ALIGNMENT 179 YS2-19j10.q1k chr11 303 41 665543 665804 C 263 92.40 1498 reject_low 21 ALIGNMENT 200 YS2-19j10.q1k chr04 43 355 644 954 F 313 91.05 1498 reject_low 19 ALIGNMENT 724 YS2-19j10.q1k chr14 1248 41 782321 783540 C 1208 87.50 1498 reject_low 3 ALIGNMENT 0 YS2-19j10.q1k chr07 906 356 1083591 1083590 C 551 0.00 1498 reject_low 18 ALIGNMENT 199 YS2-19j10.q1k chr15 803 1248 11052 11507 F 446 80.27 1498 reject_low 9 ALIGNMENT 294 YS2-19j10.q1k chr03 494 41 315587 316041 C 454 90.53 1498 reject_low 11 ALIGNMENT 0 YS2-19j10.q1k chr03 384 906 1178 1177 F 523 0.00 1498 reject_low 15 ALIGNMENT 0 YS2-19j10.q1k chr14 355 906 7478 7477 F 552 0.00 1498 reject_low 16 ALIGNMENT 0 YS2-19j10.q1k chr16 499 906 7420 7419 F 408 0.00 1498 reject_low 14 ALIGNMENT 706 YS2-19j10.q1k chr09 41 1239 7522 8733 F 1199 86.99 1498 reject_low 6 ALIGNMENT 197 YS2-19j10.q1k chr02 355 43 812323 812633 C 313 90.73 1498 reject_low 20 ALIGNMENT 0 YS2-19j10.q1k chr11 440 304 665549 665542 C 137 0.00 1498 reject_low 21 ALIGNMENT 0 YS2-19j10.q1k chr05 906 448 569451 569450 C 459 0.00 1498 reject_low 12 ALIGNMENT 234 YS2-19j10.q1k chr14 41 354 7166 7478 F 314 94.27 1498 reject_low 16 ALIGNMENT 228 YS2-19j10.q1k chr08 41 354 5242 5554 F 314 93.63 1498 reject_low 17 ALIGNMENT 0 YS2-19j10.q1k chr04 356 906 954 953 F 551 0.00 1498 reject_low 19 ALIGNMENT 215 YS2-19j10.q1k chr07 355 41 1083590 1083902 C 315 92.38 1498 reject_low 18 ALIGNMENT 0 YS2-19j10.q1k chr15 495 906 1039 1038 F 412 0.00 1498 reject_low 10 ALIGNMENT 945 YS2-19j10.p1k chr04 31 1114 1520445 1521537 F 1084 96.59 1342 accept 0 ALIGNMENT 778 YS2-19j10.q1k chr02 41 1248 6346 7564 F 1208 88.91 1498 reject_low 1 ALIGNMENT 158 YS2-19j10.q1k chr11 683 441 665307 665548 C 243 89.71 1498 reject_low 21 ALIGNMENT 701 YS2-19j10.q1k chr12 1248 41 1063319 1064540 C 1208 86.67 1498 reject_low 5 ALIGNMENT 257 YS2-19j10.q1k chr16 44 498 6964 7420 F 455 87.91 1498 reject_low 14 ALIGNMENT 0 YS2-19j10.q1k chr11 906 684 665308 665307 C 223 0.00 1498 reject_low 21 ALIGNMENT 654 YS2-19j10.q1k chr01 41 1229 539 1740 F 1189 85.53 1498 reject_low 8 ALIGNMENT 0 YS2-19j10.q1k chr15 906 499 1083722 1083721 C 408 0.00 1498 reject_low 13 ALIGNMENT 709 YS2-19j10.q1k chr12 41 1248 11823 13042 F 1208 87.09 1498 reject_low 4 ALIGNMENT 703 YS2-19j10.q1k chr10 41 1239 7505 8716 F 1199 86.91 1498 reject_low 7 ALIGNMENT 666 YS2-19j10.q1k chr04 1239 43 1523654 1524868 C 1197 85.80 1498 accept 0 ALIGNMENT 300 YS2-19j10.q1k chr05 447 41 569450 569856 C 407 93.86 1498 reject_low 12 ALIGNMENT 0 YS2-19j10.q1k chr15 62 802 11052 11051 F 741 0.00 1498 reject_low 9 ALIGNMENT 767 YS2-19j10.q1k chr11 43 1219 548 1733 F 1177 89.38 1498 reject_low 2 ALIGNMENT 1020 YS2-19j11.p1k chr07 29 1207 887004 888194 F 1179 96.44 1319 accept 0 ALIGNMENT 889 YS2-19j11.q1k chr07 1093 28 887636 888717 C 1066 96.34 1418 accept 0 ALIGNMENT 0 YS2-19j13.p1k chr12 100 62 490544 490543 C 39 0.00 268 reject_low 3 ALIGNMENT 0 YS2-19j13.q1k vc_4 62 263 5831 5830 F 202 0.00 304 reject_low 7 ALIGNMENT 212 YS2-19j13.p1k chr12 249 31 452427 452646 C 219 99.09 268 reject_low 1 ALIGNMENT 0 YS2-19j13.p1k chr12 268 250 452428 452427 C 19 0.00 268 reject_low 1 ALIGNMENT 0 YS2-19j13.q1k vc_5 265 62 5064 5063 C 204 0.00 304 reject_low 8 ALIGNMENT 0 YS2-19j13.p1k chr12 268 250 490396 490395 C 19 0.00 268 reject_low 3 ALIGNMENT 0 YS2-19j13.p1k chr12 268 250 461565 461564 C 19 0.00 268 accept 0 ALIGNMENT 0 YS2-19j13.q1k chr12 264 304 452646 452645 F 41 0.00 304 accept 0 ALIGNMENT 36 YS2-19j13.q1k vc_5 301 266 1 36 C 36 100.00 304 reject_low 10 ALIGNMENT 0 YS2-19j13.q1k chr12 193 304 490543 490542 F 112 0.00 304 reject_low 4 ALIGNMENT 0 YS2-19j13.q1k vc_3 263 62 2513 2512 C 202 0.00 304 reject_low 6 ALIGNMENT 212 YS2-19j13.p1k chr12 249 31 461564 461783 C 219 99.09 268 accept 0 ALIGNMENT 0 YS2-19j13.q1k vc_7 62 266 13525 13524 F 205 0.00 304 reject_low 9 ALIGNMENT 0 YS2-19j13.q1k chr12 264 304 461783 461782 F 41 0.00 304 reject_low 2 ALIGNMENT 211 YS2-19j13.q1k chr12 42 263 452427 452646 F 222 99.10 304 accept 0 ALIGNMENT 142 YS2-19j13.p1k chr12 249 101 490395 490543 C 149 98.66 268 reject_low 3 ALIGNMENT 41 YS2-19j13.q1k vc_3 304 264 2472 2512 C 41 100.00 304 reject_low 6 ALIGNMENT 134 YS2-19j13.q1k chr12 42 192 490395 490543 F 151 97.35 304 reject_low 4 ALIGNMENT 0 YS2-19j13.q1k vc_1 263 62 2513 2512 C 202 0.00 304 reject_low 5 ALIGNMENT 0 YS2-19j13.q1k vc_5 265 62 37 36 C 204 0.00 304 reject_low 10 ALIGNMENT 41 YS2-19j13.q1k vc_4 264 304 5831 5871 F 41 100.00 304 reject_low 7 ALIGNMENT 39 YS2-19j13.q1k vc_5 304 266 5025 5063 C 39 100.00 304 reject_low 8 ALIGNMENT 211 YS2-19j13.q1k chr12 42 263 461564 461783 F 222 99.10 304 reject_low 2 ALIGNMENT 38 YS2-19j13.q1k vc_7 267 304 13525 13562 F 38 100.00 304 reject_low 9 ALIGNMENT 41 YS2-19j13.q1k vc_1 304 264 2472 2512 C 41 100.00 304 reject_low 5 ALIGNMENT 913 YS2-19j14.q1k chr12 1155 45 1006912 1008026 C 1111 95.05 1417 accept 0 ALIGNMENT 284 YS2-19j14.p1k chr13 1221 569 162557 163216 C 653 82.24 1348 reject_low 3 ALIGNMENT 560 YS2-19j14.p1k chr08 34 1240 554409 555626 F 1207 82.60 1348 reject_low 2 ALIGNMENT 999 YS2-19j14.p1k chr12 34 1282 1002566 1003830 F 1249 94.00 1348 accept 0 ALIGNMENT 0 YS2-19j14.p1k chr13 568 62 163217 163216 C 507 0.00 1348 reject_low 3 ALIGNMENT 571 YS2-19j14.p1k chr01 60 1240 227773 228967 F 1181 83.49 1348 reject_low 1 ALIGNMENT 0 YS2-19j15.q1k chr13 270 351 183457 183456 F 82 0.00 1437 accept_chi 1 ALIGNMENT 0 YS2-19j15.q1k vc_3 62 309 2531 2530 F 248 0.00 1437 reject_low 7 ALIGNMENT 42 YS2-19j15.q1k vc_7 880 801 4591 4670 C 80 85.00 1437 reject_low 9 ALIGNMENT 0 YS2-19j15.q1k vc_5 267 62 5068 5067 C 206 0.00 1437 reject_low 15 ALIGNMENT 350 YS2-19j15.q1k vc_7 1092 310 1945 2727 C 783 82.50 1437 reject_vc 3 ALIGNMENT 350 YS2-19j15.q1k vc_5 310 1092 2398 3180 F 783 82.50 1437 reject_vc 2 ALIGNMENT 0 YS2-19j15.q1k vc_7 309 62 2728 2727 C 248 0.00 1437 reject_vc 3 ALIGNMENT 0 YS2-19j15.q1k vc_7 62 272 63 62 F 211 0.00 1437 reject_low 17 ALIGNMENT 41 YS2-19j15.q1k vc_2 310 270 2105 2145 C 41 100.00 1437 reject_low 13 ALIGNMENT 280 YS2-19j15.q1k vc_2 310 769 2164 2623 F 460 87.61 1437 reject_low 6 ALIGNMENT 184 YS2-19j15.q1k chr13 39 269 183228 183457 F 231 96.10 1437 accept_chi 1 ALIGNMENT 62 YS2-19j15.q1k vc_4 398 310 1446 1534 C 89 91.01 1437 reject_low 11 ALIGNMENT 0 YS2-19j15.q1k vc_1 351 311 2473 2472 C 41 0.00 1437 reject_low 12 ALIGNMENT 0 YS2-19j15.q1k vc_2 269 62 2146 2145 C 208 0.00 1437 reject_low 13 ALIGNMENT 280 YS2-19j15.q1k vc_1 310 769 2531 2990 F 460 87.61 1437 reject_low 5 ALIGNMENT 41 YS2-19j15.q1k vc_1 310 270 2472 2512 C 41 100.00 1437 reject_low 12 ALIGNMENT 0 YS2-19j15.q1k vc_2 351 311 2106 2105 C 41 0.00 1437 reject_low 13 ALIGNMENT 0 YS2-19j15.q1k vc_7 469 62 6412 6411 C 408 0.00 1437 reject_low 9 ALIGNMENT 37 YS2-19j15.q1k vc_5 307 268 1 40 C 40 97.50 1437 reject_low 16 ALIGNMENT 0 YS2-19j15.q1k vc_4 309 62 5813 5812 C 248 0.00 1437 reject_low 4 ALIGNMENT 0 YS2-19j15.q1k vc_7 311 351 13562 13561 F 41 0.00 1437 reject_low 18 ALIGNMENT 0 YS2-19j15.q1k vc_4 62 269 5831 5830 F 208 0.00 1437 reject_low 10 ALIGNMENT 0 YS2-19j15.q1k vc_3 269 62 2513 2512 C 208 0.00 1437 reject_low 14 ALIGNMENT 0 YS2-19j15.q1k vc_7 311 351 100 99 F 41 0.00 1437 reject_low 17 ALIGNMENT 102 YS2-19j15.q1k vc_4 310 471 6353 6514 F 162 88.89 1437|1,0 reject_low 10 ALIGNMENT 0 YS2-19j15.q1k vc_2 62 309 2164 2163 F 248 0.00 1437 reject_low 6 ALIGNMENT 0 YS2-19j15.q1k vc_1 62 309 2531 2530 F 248 0.00 1437 reject_low 5 ALIGNMENT 0 YS2-19j15.q1k vc_4 309 62 1535 1534 C 248 0.00 1437 reject_low 11 ALIGNMENT 0 YS2-19j15.q1k vc_5 62 309 2398 2397 F 248 0.00 1437 reject_vc 2 ALIGNMENT 41 YS2-19j15.q1k vc_4 270 310 5831 5871 F 41 100.00 1437 reject_low 10 ALIGNMENT 0 YS2-19j15.q1k vc_1 269 62 2513 2512 C 208 0.00 1437 reject_low 12 ALIGNMENT 138 YS2-19j15.q1k vc_7 769 520 4923 5172 C 250 85.60 1437|0,1 reject_low 9 ALIGNMENT 0 YS2-19j15.q1k vc_5 351 308 2 1 C 44 0.00 1437 reject_low 16 ALIGNMENT 311 YS2-19j15.q1k vc_4 880 310 5240 5812 C 571 85.46 1437 reject_low 4 ALIGNMENT 40 YS2-19j15.q1k vc_5 310 268 5025 5067 C 43 97.67 1437 reject_low 15 ALIGNMENT 0 YS2-19j15.p1k chr13 285 269 183225 183224 C 17 0.00 285 accept_chi 0 ALIGNMENT 0 YS2-19j15.q1k vc_3 351 311 2473 2472 C 41 0.00 1437 reject_low 14 ALIGNMENT 38 YS2-19j15.q1k vc_7 273 310 13525 13562 F 38 100.00 1437 reject_low 18 ALIGNMENT 0 YS2-19j15.q1k vc_7 62 272 13525 13524 F 211 0.00 1437 reject_low 18 ALIGNMENT 0 YS2-19j15.q1k vc_4 311 310 5872 6353 F 0 0.00 1437 reject_low 10 ALIGNMENT 0 YS2-19j15.q1k vc_4 62 309 126 125 F 248 0.00 1437 reject_low 8 ALIGNMENT 38 YS2-19j15.q1k vc_7 273 310 63 100 F 38 100.00 1437 reject_low 17 ALIGNMENT 210 YS2-19j15.p1k chr13 268 36 183224 183456 C 233 99.14 285 accept_chi 0 ALIGNMENT 39 YS2-19j15.q1k vc_7 521 470 6360 6411 C 52 92.31 1437|1,0 reject_low 9 ALIGNMENT 0 YS2-19j15.q1k vc_5 351 311 5026 5025 C 41 0.00 1437 reject_low 15 ALIGNMENT 0 YS2-19j15.q1k vc_4 472 800 288 1904 F 329 0.00 1437 reject_low 8 ALIGNMENT 102 YS2-19j15.q1k vc_4 310 471 126 287 F 162 88.89 1437 reject_low 8 ALIGNMENT 74 YS2-19j15.q1k vc_4 801 1092 1905 2196 F 292 76.71 1437 reject_low 8 ALIGNMENT 0 YS2-19j15.q1k vc_7 520 521 5172 6360 C 0 0.00 1437 reject_low 9 ALIGNMENT 0 YS2-19j15.q1k vc_7 800 770 4671 4922 C 31 0.00 1437 reject_low 9 ALIGNMENT 41 YS2-19j15.q1k vc_3 310 270 2472 2512 C 41 100.00 1437 reject_low 14 ALIGNMENT 280 YS2-19j15.q1k vc_3 310 769 2531 2990 F 460 87.61 1437 reject_low 7 ALIGNMENT 0 YS2-19j15.q1k vc_5 267 62 41 40 C 206 0.00 1437 reject_low 16 ALIGNMENT 42 YS2-19j16.q1k chr15 409 75 441491 441814 C 335 73.73 1414 reject_bad_break 0 ALIGNMENT 0 YS2-19j16.q1k chr15 623 410 441278 441490 C 214 0.00 1414 reject_bad_break 0 ALIGNMENT 44 YS2-19j16.q1k chr15 811 624 441090 441277 C 188 75.00 1414 reject_bad_break 0 ALIGNMENT 926 YS2-19j17.q1k chr12 41 1117 294811 295895 F 1077 95.82 1430 accept 0 ALIGNMENT 1026 YS2-19j17.p1k chr12 1196 30 298775 299951 C 1167 96.57 1327 accept 0 ALIGNMENT 950 YS2-19j18.p1k chr13 36 1151 875649 876780 F 1116 96.24 1316 accept 0 ALIGNMENT 976 YS2-19j18.q1k chr13 1173 40 878825 879954 C 1134 95.59 1438 accept 0 ALIGNMENT 36 YS2-19j19.q1k vc_5 611 576 1 36 C 36 100.00 614 reject_low 10 ALIGNMENT 39 YS2-19j19.q1k vc_5 614 576 5025 5063 C 39 100.00 614 reject_low 8 ALIGNMENT 0 YS2-19j19.q1k vc_3 573 62 2513 2512 C 512 0.00 614 reject_low 6 ALIGNMENT 0 YS2-19j19.q1k vc_2 573 62 2146 2145 C 512 0.00 614 reject_low 5 ALIGNMENT 0 YS2-19j19.q1k vc_5 575 62 37 36 C 514 0.00 614 reject_low 10 ALIGNMENT 0 YS2-19j19.p1k chr11 320 577 200000 199999 F 258 0.00 577 reject_low 2 ALIGNMENT 114 YS2-19j19.q1k chr11 572 287 199715 200000 C 286 81.12 614 reject_low 3 ALIGNMENT 0 YS2-19j19.q1k vc_4 62 573 5831 5830 F 512 0.00 614 reject_low 7 ALIGNMENT 0 YS2-19j19.q1k vc_7 62 576 13525 13524 F 515 0.00 614 reject_low 9 ALIGNMENT 38 YS2-19j19.q1k vc_7 577 614 13525 13562 F 38 100.00 614 reject_low 9 ALIGNMENT 41 YS2-19j19.q1k vc_3 614 574 2472 2512 C 41 100.00 614 reject_low 6 ALIGNMENT 41 YS2-19j19.q1k vc_1 614 574 2472 2512 C 41 100.00 614 reject_low 4 ALIGNMENT 41 YS2-19j19.q1k vc_2 614 574 2105 2145 C 41 100.00 614 reject_low 5 ALIGNMENT 0 YS2-19j19.p1k chr13 577 560 486512 486511 C 18 0.00 577 accept_chi 0 ALIGNMENT 0 YS2-19j19.q1k vc_1 573 62 2513 2512 C 512 0.00 614 reject_low 4 ALIGNMENT 0 YS2-19j19.q1k chr11 286 62 200001 200000 C 225 0.00 614 reject_low 3 ALIGNMENT 41 YS2-19j19.q1k vc_4 574 614 5831 5871 F 41 100.00 614 reject_low 7 ALIGNMENT 0 YS2-19j19.q1k chr11 614 573 199716 199715 C 42 0.00 614 reject_low 3 ALIGNMENT 505 YS2-19j19.q1k chr13 46 573 486511 487037 F 528 99.81 614 accept_chi 1 ALIGNMENT 0 YS2-19j19.q1k vc_5 575 62 5064 5063 C 514 0.00 614 reject_low 8 ALIGNMENT 114 YS2-19j19.p1k chr11 34 319 199715 200000 F 286 81.12 577 reject_low 2 ALIGNMENT 509 YS2-19j19.p1k chr13 559 33 486511 487037 C 527 100.00 577 accept_chi 0 ALIGNMENT 0 YS2-19j19.q1k chr13 574 614 487037 487036 F 41 0.00 614 accept_chi 1 ALIGNMENT 41 YS2-19j21.q1k vc_2 351 311 2105 2145 C 41 100.00 351 reject_low 3 ALIGNMENT 0 YS2-19j21.q1k vc_7 62 313 13525 13524 F 252 0.00 351 reject_low 7 ALIGNMENT 0 YS2-19j21.q1k vc_5 312 62 37 36 C 251 0.00 351 reject_low 8 ALIGNMENT 260 YS2-19j21.q1k chr13 311 41 273577 273847 C 271 100.00 351 accept_chi 0 ALIGNMENT 41 YS2-19j21.q1k vc_4 311 351 5831 5871 F 41 100.00 351 reject_low 5 ALIGNMENT 0 YS2-19j21.q1k chr13 351 312 273578 273577 C 40 0.00 351 accept_chi 0 ALIGNMENT 38 YS2-19j21.q1k vc_7 314 351 13525 13562 F 38 100.00 351 reject_low 7 ALIGNMENT 36 YS2-19j21.q1k vc_5 348 313 1 36 C 36 100.00 351 reject_low 8 ALIGNMENT 0 YS2-19j21.q1k vc_3 310 62 2513 2512 C 249 0.00 351 reject_low 4 ALIGNMENT 0 YS2-19j21.q1k vc_5 312 62 5064 5063 C 251 0.00 351 reject_low 6 ALIGNMENT 41 YS2-19j21.q1k vc_1 351 311 2472 2512 C 41 100.00 351 reject_low 2 ALIGNMENT 41 YS2-19j21.q1k vc_3 351 311 2472 2512 C 41 100.00 351 reject_low 4 ALIGNMENT 241 YS2-19j21.p1k chr13 39 303 273582 273847 F 265 98.49 321 accept_chi 1 ALIGNMENT 0 YS2-19j21.q1k vc_4 62 310 5831 5830 F 249 0.00 351 reject_low 5 ALIGNMENT 0 YS2-19j21.q1k vc_1 310 62 2513 2512 C 249 0.00 351 reject_low 2 ALIGNMENT 39 YS2-19j21.q1k vc_5 351 313 5025 5063 C 39 100.00 351 reject_low 6 ALIGNMENT 0 YS2-19j21.q1k vc_2 310 62 2146 2145 C 249 0.00 351 reject_low 3 ALIGNMENT 0 YS2-19j21.p1k chr13 304 321 273847 273846 F 18 0.00 321 accept_chi 1 ALIGNMENT 0 YS2-19j22.q1k chr04 174 212 1125433 1125432 F 39 0.00 212 accept 0 ALIGNMENT 42 YS2-19j22.q1k vc_4 171 212 5830 5871 F 42 100.00 212 reject_low 4 ALIGNMENT 42 YS2-19j22.q1k vc_3 212 171 2472 2513 C 42 100.00 212 reject_low 3 ALIGNMENT 132 YS2-19j22.q1k chr04 38 173 1125298 1125433 F 136 99.26 212 accept 0 ALIGNMENT 42 YS2-19j22.q1k vc_2 212 171 2105 2146 C 42 100.00 212 reject_low 2 ALIGNMENT 36 YS2-19j22.q1k vc_5 209 174 1 36 C 36 100.00 212 reject_low 7 ALIGNMENT 0 YS2-19j22.q1k vc_1 170 62 2514 2513 C 109 0.00 212 reject_low 1 ALIGNMENT 42 YS2-19j22.q1k vc_1 212 171 2472 2513 C 42 100.00 212 reject_low 1 ALIGNMENT 38 YS2-19j22.q1k vc_7 175 212 13525 13562 F 38 100.00 212 reject_low 6 ALIGNMENT 0 YS2-19j22.q1k vc_5 173 62 37 36 C 112 0.00 212 reject_low 7 ALIGNMENT 0 YS2-19j22.q1k vc_4 62 170 5830 5829 F 109 0.00 212 reject_low 4 ALIGNMENT 0 YS2-19j22.q1k vc_7 62 174 13525 13524 F 113 0.00 212 reject_low 6 ALIGNMENT 0 YS2-19j22.q1k vc_2 170 62 2147 2146 C 109 0.00 212 reject_low 2 ALIGNMENT 39 YS2-19j22.q1k vc_5 212 174 5025 5063 C 39 100.00 212 reject_low 5 ALIGNMENT 0 YS2-19j22.q1k vc_3 170 62 2514 2513 C 109 0.00 212 reject_low 3 ALIGNMENT 0 YS2-19j22.q1k vc_5 173 62 5064 5063 C 112 0.00 212 reject_low 5 ALIGNMENT 208 YS2-19j24.q1k vc_7 303 53 4922 5172 C 251 94.42 1004|0,1 reject_low 12 ALIGNMENT 23 YS2-19j24.q1k vc_5 608 666 3155 3210 F 59 83.05 1004 reject_vc 0 ALIGNMENT 180 YS2-19j24.p1k vc_1 379 1 1363 1749 C 379 84.17 442 reject_low 3 ALIGNMENT 262 YS2-19j24.q1k vc_1 1 303 2689 2991 F 303 95.71 1004 reject_low 7 ALIGNMENT 151 YS2-19j24.q1k vc_4 308 529 1879 2099 F 222 90.54 1004 reject_low 11 ALIGNMENT 262 YS2-19j24.q1k vc_3 1 303 2689 2991 F 303 95.71 1004 reject_low 9 ALIGNMENT 0 YS2-19j24.q1k vc_4 62 237 1548 1547 F 176 0.00 1004 reject_low 11 ALIGNMENT 417 YS2-19j24.q1k vc_7 529 1 2042 2569 C 529 93.19 1004 reject_low 1 ALIGNMENT 175 YS2-19j24.p1k vc_7 1 379 13918 14304 F 379 83.64 442 reject_low 6 ALIGNMENT 0 YS2-19j24.q1k vc_7 607 530 1971 2041 C 78 0.00 1004 reject_low 1 ALIGNMENT 0 YS2-19j24.q1k vc_4 237 62 6340 6339 C 176 0.00 1004 reject_low 14 ALIGNMENT 23 YS2-19j24.q1k vc_4 608 666 2171 2226 F 59 83.05 1004 reject_low 11 ALIGNMENT 180 YS2-19j24.p1k vc_3 379 1 1363 1749 C 379 84.17 442 reject_low 5 ALIGNMENT 0 YS2-19j24.q1k vc_7 53 54 5172 6360 C 0 0.00 1004 reject_low 12 ALIGNMENT 51 YS2-19j24.q1k vc_7 54 3 6360 6411 C 52 100.00 1004|1,0 reject_low 12 ALIGNMENT 180 YS2-19j24.p1k vc_2 379 1 1363 1749 C 379 84.17 442 reject_low 4 ALIGNMENT 0 YS2-19j24.q1k vc_4 305 307 1615 1878 F 3 0.00 1004 reject_low 11 ALIGNMENT 181 YS2-19j24.p1k vc_6 1 289 3712 4010 F 289 88.93 442 reject_low 10 ALIGNMENT 92 YS2-19j24.q1k vc_7 417 307 4587 4697 C 111 94.59 1004 reject_low 12 ALIGNMENT 53 YS2-19j24.q1k vc_4 238 304 1548 1614 F 67 94.03 1004 reject_low 11 ALIGNMENT 417 YS2-19j24.q1k vc_5 1 529 2556 3083 F 529 93.38 1004 reject_vc 0 ALIGNMENT 53 YS2-19j24.q1k vc_4 304 238 46 112 C 67 94.03 1004 reject_low 13 ALIGNMENT 23 YS2-19j24.q1k vc_7 666 608 1915 1970 C 59 83.05 1004 reject_low 1,12 ALIGNMENT 349 YS2-19j24.q1k vc_4 417 1 5236 5654 C 417 94.72 1004 reject_low 2 ALIGNMENT 175 YS2-19j24.p1k vc_7 1 379 456 842 F 379 83.64 442 reject_low 1 ALIGNMENT 180 YS2-19j24.p1k vc_5 379 1 4283 4669 C 379 84.17 442 reject_vc 0 ALIGNMENT 0 YS2-19j24.q1k vc_4 237 62 113 112 C 176 0.00 1004 reject_low 13 ALIGNMENT 262 YS2-19j24.q1k vc_2 1 303 2322 2624 F 303 95.71 1004 reject_low 8 ALIGNMENT 53 YS2-19j24.q1k vc_4 304 238 6273 6339 C 67 94.03 1004 reject_low 14 ALIGNMENT 0 YS2-19j24.q1k vc_7 607 418 1971 4586 C 190 0.00 1004 reject_low 12 ALIGNMENT 0 YS2-19j24.q1k vc_4 530 607 2100 2170 F 78 0.00 1004 reject_low 11 ALIGNMENT 0 YS2-19j24.q1k vc_7 306 304 4698 4921 C 3 0.00 1004 reject_low 12 ALIGNMENT 0 YS2-19j24.q1k vc_5 530 607 3084 3154 F 78 0.00 1004 reject_vc 0 ALIGNMENT 1018 YS2-19k01.q1k chr15 40 1245 555629 556849 F 1206 96.52 1366 accept 0 ALIGNMENT 1024 YS2-19k01.p1k chr15 1212 37 557680 558853 C 1176 96.85 1239 accept 0 ALIGNMENT 883 YS2-19k02.q1k chr11 1069 42 308868 309901 C 1028 96.40 1335 accept 0 ALIGNMENT 1049 YS2-19k02.p1k chr11 39 1287 306508 307745 F 1249 96.48 1287 accept 0 ALIGNMENT 0 YS2-19k03.p1k chr12 479 461 461378 461377 C 19 0.00 479 accept 1 ALIGNMENT 0 YS2-19k03.p1k chr12 124 62 490544 490543 C 63 0.00 479 reject_low 2 ALIGNMENT 329 YS2-19k03.p1k chr12 460 125 490208 490543 C 336 99.40 479 reject_low 2 ALIGNMENT 399 YS2-19k03.p1k chr12 460 37 461377 461800 C 424 98.11 479 accept 1 ALIGNMENT 0 YS2-19k03.p1k chr12 479 461 490209 490208 C 19 0.00 479 reject_low 2 ALIGNMENT 399 YS2-19k03.p1k chr12 460 37 452240 452663 C 424 98.11 479 accept 0 ALIGNMENT 0 YS2-19k03.p1k chr12 479 461 452241 452240 C 19 0.00 479 accept 0 ALIGNMENT 957 YS2-19k04.p1k chr15 1197 36 533550 534743 C 1162 95.01 1297 accept 0 ALIGNMENT 1030 YS2-19k04.q1k chr15 38 1180 528293 529438 F 1143 97.11 1438 accept 0 ALIGNMENT 57 YS2-19k05.q1k vc_4 304 238 46 112 C 67 95.52 960 reject_low 9 ALIGNMENT 51 YS2-19k05.q1k vc_7 54 3 6360 6411 C 52 100.00 960|1,0 reject_low 8 ALIGNMENT 160 YS2-19k05.q1k vc_4 311 638 1882 2208 F 328 84.45 960 reject_vc 7 ALIGNMENT 283 YS2-19k05.q1k vc_3 1 303 2689 2991 F 303 98.02 960 reject_vc 6 ALIGNMENT 0 YS2-19k05.q1k vc_4 62 237 1548 1547 F 176 0.00 960 reject_vc 7 ALIGNMENT 0 YS2-19k05.q1k vc_4 305 310 1615 1881 F 6 0.00 960 reject_vc 7 ALIGNMENT 228 YS2-19k05.q1k vc_7 303 53 4922 5172 C 251 97.21 960|0,1 reject_low 8 ALIGNMENT 57 YS2-19k05.q1k vc_4 304 238 6273 6339 C 67 95.52 960 reject_low 10 ALIGNMENT 450 YS2-19k05.q1k vc_5 1 638 2556 3192 F 638 90.91 960 reject_vc 1 ALIGNMENT 0 YS2-19k05.q1k vc_7 304 304 4700 4921 C 1 0.00 960 reject_low 8 ALIGNMENT 81 YS2-19k05.q1k vc_7 420 305 4583 4699 C 116 90.52 960 reject_low 8 ALIGNMENT 167 YS2-19k05.p1k chr09 229 37 157819 158011 C 193 95.85 247 accept 0 ALIGNMENT 0 YS2-19k05.p1k chr09 247 230 157820 157819 C 18 0.00 247 accept 0 ALIGNMENT 0 YS2-19k05.q1k vc_7 53 54 5172 6360 C 0 0.00 960 reject_low 8 ALIGNMENT 283 YS2-19k05.q1k vc_2 1 303 2322 2624 F 303 98.02 960 reject_vc 5 ALIGNMENT 283 YS2-19k05.q1k vc_1 1 303 2689 2991 F 303 98.02 960 reject_vc 4 ALIGNMENT 0 YS2-19k05.q1k vc_4 237 62 6340 6339 C 176 0.00 960 reject_low 10 ALIGNMENT 57 YS2-19k05.q1k vc_4 238 304 1548 1614 F 67 95.52 960 reject_vc 7 ALIGNMENT 450 YS2-19k05.q1k vc_7 638 1 1933 2569 C 638 90.91 960 reject_vc 2 ALIGNMENT 0 YS2-19k05.q1k vc_4 237 62 113 112 C 176 0.00 960 reject_low 9 ALIGNMENT 359 YS2-19k05.q1k vc_4 420 1 5232 5654 C 420 95.48 960 reject_vc 3 ALIGNMENT 725 YS2-19k06.p1k chr12 48 868 457885 458687 F 821 97.69 1334 reject_bad_break 0 ALIGNMENT 725 YS2-19k06.p1k chr12 48 868 467022 467824 F 821 97.69 1334 reject_low 1 ALIGNMENT 891 YS2-19k06.q1k chr12 1212 40 459180 460377 C 1173 93.69 1505 reject_bad_break 0 ALIGNMENT 0 YS2-19k06.q1k chr12 840 717 489349 489348 C 124 0.00 1505 reject_low 2 ALIGNMENT 119 YS2-19k06.q1k chr12 716 598 482044 482162 C 119 100.00 1505 reject_low 4 ALIGNMENT 0 YS2-19k06.q1k chr12 597 62 468931 468930 C 536 0.00 1505 reject_low 1 ALIGNMENT 119 YS2-19k06.q1k chr12 716 598 472464 472582 C 119 100.00 1505 reject_low 3 ALIGNMENT 64 YS2-19k06.p1k chr12 923 1153 458715 458974 F 231 81.39 1334 reject_bad_break 0 ALIGNMENT 119 YS2-19k06.q1k chr12 716 598 485696 485814 C 119 100.00 1505 reject_low 5 ALIGNMENT 75 YS2-19k06.q1k chr06 977 1087 31622 31729 F 111 92.79 1505 reject_low 6 ALIGNMENT 0 YS2-19k06.q1k chr12 840 717 472465 472464 C 124 0.00 1505 reject_low 3 ALIGNMENT 0 YS2-19k06.q1k chr12 582 62 489482 489481 C 521 0.00 1505 reject_low 2 ALIGNMENT 0 YS2-19k06.q1k chr12 840 717 485697 485696 C 124 0.00 1505 reject_low 5 ALIGNMENT 64 YS2-19k06.p1k chr12 923 1153 467852 468111 F 231 81.39 1334 reject_low 1 ALIGNMENT 128 YS2-19k06.q1k chr12 716 583 489348 489481 C 134 98.51 1505 reject_low 2 ALIGNMENT 0 YS2-19k06.q1k chr12 597 62 485815 485814 C 536 0.00 1505 reject_low 5 ALIGNMENT 0 YS2-19k06.q1k chr12 597 62 472583 472582 C 536 0.00 1505 reject_low 3 ALIGNMENT 492 YS2-19k06.q1k chr12 1236 598 468291 468930 C 639 93.58 1505 reject_low 1 ALIGNMENT 0 YS2-19k06.q1k chr12 597 62 482163 482162 C 536 0.00 1505 reject_low 4 ALIGNMENT 0 YS2-19k06.p1k chr12 869 922 458688 458714 F 54 0.00 1334 reject_bad_break 0 ALIGNMENT 0 YS2-19k06.p1k chr12 869 922 467825 467851 F 54 0.00 1334 reject_low 1 ALIGNMENT 0 YS2-19k06.q1k chr06 62 976 31622 31621 F 915 0.00 1505 reject_low 6 ALIGNMENT 0 YS2-19k06.q1k chr12 840 717 482045 482044 C 124 0.00 1505 reject_low 4 ALIGNMENT 501 YS2-19k07.q1k vc_7 664 1 1914 2569 C 664 93.52 936 reject_vc 2 ALIGNMENT 0 YS2-19k07.p1k chr02 266 290 372374 372373 F 25 0.00 290 accept 0 ALIGNMENT 0 YS2-19k07.q1k vc_4 237 62 113 112 C 176 0.00 936 reject_low 9 ALIGNMENT 0 YS2-19k07.q1k vc_4 237 62 6340 6339 C 176 0.00 936 reject_low 10 ALIGNMENT 302 YS2-19k07.q1k vc_1 1 303 2689 2991 F 303 100.00 936 reject_vc 4 ALIGNMENT 51 YS2-19k07.q1k vc_7 54 3 6360 6411 C 52 100.00 936|1,0 reject_low 8 ALIGNMENT 192 YS2-19k07.q1k vc_4 308 673 1879 2236 F 366 87.70 936 reject_vc 7 ALIGNMENT 0 YS2-19k07.q1k vc_7 304 304 4700 4921 C 1 0.00 936 reject_low 8 ALIGNMENT 506 YS2-19k07.q1k vc_5 1 700 2556 3248 F 700 92.43 936 reject_vc 1 ALIGNMENT 302 YS2-19k07.q1k vc_2 1 303 2322 2624 F 303 100.00 936 reject_vc 5 ALIGNMENT 302 YS2-19k07.q1k vc_3 1 303 2689 2991 F 303 100.00 936 reject_vc 6 ALIGNMENT 403 YS2-19k07.q1k vc_4 419 1 5232 5654 C 419 99.05 936 reject_vc 3 ALIGNMENT 65 YS2-19k07.q1k vc_4 304 238 6273 6339 C 67 100.00 936 reject_low 10 ALIGNMENT 65 YS2-19k07.q1k vc_4 238 304 1548 1614 F 67 100.00 936 reject_vc 7 ALIGNMENT 193 YS2-19k07.p1k chr02 32 265 372141 372374 F 234 96.15 290 accept 0 ALIGNMENT 0 YS2-19k07.q1k vc_7 53 54 5172 6360 C 0 0.00 936 reject_low 8 ALIGNMENT 105 YS2-19k07.q1k vc_7 419 305 4583 4699 C 115 98.26 936 reject_low 8 ALIGNMENT 247 YS2-19k07.q1k vc_7 303 53 4922 5172 C 251 99.60 936|0,1 reject_low 8 ALIGNMENT 0 YS2-19k07.q1k vc_4 305 307 1615 1878 F 3 0.00 936 reject_vc 7 ALIGNMENT 0 YS2-19k07.q1k vc_4 62 237 1548 1547 F 176 0.00 936 reject_vc 7 ALIGNMENT 65 YS2-19k07.q1k vc_4 304 238 46 112 C 67 100.00 936 reject_low 9 ALIGNMENT 924 YS2-19k09.q1k chr04 1118 40 1498877 1499961 C 1079 97.41 1385 accept 0 ALIGNMENT 986 YS2-19k09.p1k chr04 32 1199 1495819 1496998 F 1168 95.80 1315 accept 0 ALIGNMENT 950 YS2-19k10.q1k chr06 31 1105 194521 195611 F 1075 97.30 1410 accept 0 ALIGNMENT 174 YS2-19k10.p1k chr06 1346 957 198938 199345 C 390 84.36 1383|0,7 accept 0 ALIGNMENT 841 YS2-19k10.p1k chr06 970 35 199362 200300 C 936 98.08 1383|7,0 accept 0 ALIGNMENT 0 YS2-19k10.p1k chr06 963 964 199339 199368 C 0 0.00 1383 accept 0 ALIGNMENT 40 YS2-19k11.q1k vc_3 330 291 2472 2511 C 40 100.00 330 reject_low 3 ALIGNMENT 0 YS2-19k11.q1k chr04 291 330 1403380 1403379 F 40 0.00 330 accept_chi 0 ALIGNMENT 40 YS2-19k11.q1k vc_4 291 330 5832 5871 F 40 100.00 330 reject_low 4 ALIGNMENT 0 YS2-19k11.q1k vc_5 291 62 5064 5063 C 230 0.00 330 reject_low 5 ALIGNMENT 0 YS2-19k11.q1k vc_1 290 62 2512 2511 C 229 0.00 330 reject_low 2 ALIGNMENT 36 YS2-19k11.q1k vc_5 327 292 1 36 C 36 100.00 330 reject_low 7 ALIGNMENT 38 YS2-19k11.q1k vc_7 293 330 13525 13562 F 38 100.00 330 reject_low 6 ALIGNMENT 40 YS2-19k11.q1k vc_1 330 291 2472 2511 C 40 100.00 330 reject_low 2 ALIGNMENT 0 YS2-19k11.q1k vc_7 62 292 13525 13524 F 231 0.00 330 reject_low 6 ALIGNMENT 247 YS2-19k11.p1k chr04 299 37 1403118 1403380 C 263 99.24 300 accept_chi 1 ALIGNMENT 251 YS2-19k11.q1k chr04 31 290 1403121 1403380 F 260 100.00 330 accept_chi 0 ALIGNMENT 0 YS2-19k11.q1k vc_5 291 62 37 36 C 230 0.00 330 reject_low 7 ALIGNMENT 0 YS2-19k11.q1k vc_3 290 62 2512 2511 C 229 0.00 330 reject_low 3 ALIGNMENT 39 YS2-19k11.q1k vc_5 330 292 5025 5063 C 39 100.00 330 reject_low 5 ALIGNMENT 0 YS2-19k11.q1k vc_4 62 290 5832 5831 F 229 0.00 330 reject_low 4 ALIGNMENT 0 YS2-19k12.p1k vc_6 883 499 5264 5263 C 385 0.00 1337 reject_low 2 ALIGNMENT 645 YS2-19k12.q1k scplasm1 1054 40 1885 2902 C 1015 88.28 1418 accept_chi 1 ALIGNMENT 1056 YS2-19k12.p1k scplasm1 1216 32 4837 6037 C 1185 97.22 1337 accept_chi 0 ALIGNMENT 444 YS2-19k12.p1k vc_6 498 32 5263 5730 C 467 99.57 1337 reject_low 2 ALIGNMENT 1064 YS2-19k13.p1k chr08 33 1279 438076 439331 F 1247 96.31 1291 accept 0 ALIGNMENT 1008 YS2-19k13.q1k chr08 1226 27 441957 443176 C 1200 95.75 1366 accept 0 ALIGNMENT 811 YS2-19k15.q1k chr04 41 1106 350620 351688 F 1066 94.56 1305 accept 0 ALIGNMENT 1034 YS2-19k15.p1k chr04 1201 29 351681 352866 C 1173 96.76 1274 accept 0 ALIGNMENT 68 YS2-19k17.q1k vc_4 704 616 1446 1534 C 89 93.26 1427 reject_low 13 ALIGNMENT 0 YS2-19k17.q1k vc_2 62 615 2164 2163 F 554 0.00 1427 reject_low 3 ALIGNMENT 124 YS2-19k17.q1k vc_7 861 616 2481 2727 C 246 84.55 1427 reject_low 6 ALIGNMENT 31 YS2-19k17.q1k vc_3 616 577 2472 2511 C 40 92.50 1427 reject_low 12 ALIGNMENT 108 YS2-19k17.q1k vc_4 616 776 126 287 F 161 90.06 1427 reject_low 9 ALIGNMENT 124 YS2-19k17.q1k vc_3 616 861 2531 2777 F 246 84.55 1427 reject_low 4 ALIGNMENT 495 YS2-19k17.p1k chr14 564 29 629177 629714 C 536 98.88 582 accept_chi 0 ALIGNMENT 119 YS2-19k17.q1k vc_4 861 616 5564 5812 C 246 84.15 1427 reject_low 7 ALIGNMENT 494 YS2-19k17.q1k chr14 40 576 629177 629714 F 537 98.70 1427 accept_chi 1 ALIGNMENT 0 YS2-19k17.q1k vc_1 62 615 2531 2530 F 554 0.00 1427 reject_low 2 ALIGNMENT 31 YS2-19k17.q1k vc_1 616 577 2472 2511 C 40 92.50 1427 reject_low 10 ALIGNMENT 124 YS2-19k17.q1k vc_1 616 861 2531 2777 F 246 84.55 1427 reject_low 2 ALIGNMENT 0 YS2-19k17.q1k vc_4 62 615 126 125 F 554 0.00 1427 reject_low 9 ALIGNMENT 31 YS2-19k17.q1k vc_2 616 577 2105 2144 C 40 92.50 1427 reject_low 11 ALIGNMENT 0 YS2-19k17.q1k vc_4 615 62 5813 5812 C 554 0.00 1427 reject_low 7 ALIGNMENT 0 YS2-19k17.q1k vc_3 62 615 2531 2530 F 554 0.00 1427 reject_low 4 ALIGNMENT 0 YS2-19k17.q1k vc_2 576 62 2145 2144 C 515 0.00 1427 reject_low 11 ALIGNMENT 0 YS2-19k17.q1k vc_4 617 616 5872 6353 F 0 0.00 1427 reject_low 8 ALIGNMENT 0 YS2-19k17.q1k vc_7 615 62 2728 2727 C 554 0.00 1427 reject_low 6 ALIGNMENT 124 YS2-19k17.q1k vc_2 616 861 2164 2410 F 246 84.55 1427 reject_low 3 ALIGNMENT 108 YS2-19k17.q1k vc_4 616 776 6353 6514 F 161 90.06 1427|1,0 reject_low 8 ALIGNMENT 0 YS2-19k17.p1k chr14 582 565 629178 629177 C 18 0.00 582 accept_chi 0 ALIGNMENT 0 YS2-19k17.q1k vc_3 576 62 2512 2511 C 515 0.00 1427 reject_low 12 ALIGNMENT 0 YS2-19k17.q1k vc_4 615 62 1535 1534 C 554 0.00 1427 reject_low 13 ALIGNMENT 0 YS2-19k17.q1k vc_5 62 615 2398 2397 F 554 0.00 1427 reject_low 5 ALIGNMENT 31 YS2-19k17.q1k vc_4 577 616 5832 5871 F 40 92.50 1427 reject_low 8 ALIGNMENT 0 YS2-19k17.q1k vc_4 62 576 5832 5831 F 515 0.00 1427 reject_low 8 ALIGNMENT 124 YS2-19k17.q1k vc_5 616 861 2398 2644 F 246 84.55 1427 reject_low 5 ALIGNMENT 0 YS2-19k17.q1k vc_1 576 62 2512 2511 C 515 0.00 1427 reject_low 10 ALIGNMENT 978 YS2-19k18.p1k chr15 1136 31 579729 580833 C 1106 97.02 1318 accept_chi 0 ALIGNMENT 974 YS2-19k18.q1k chr15 31 1112 579729 580818 F 1082 97.41 1375 accept_chi 1 ALIGNMENT 0 YS2-19k19.q1k vc_4 62 222 5831 5830 F 161 0.00 263 reject_vc 5 ALIGNMENT 0 YS2-19k19.q1k vc_2 222 62 2146 2145 C 161 0.00 263 reject_vc 3 ALIGNMENT 41 YS2-19k19.q1k vc_1 263 223 2472 2512 C 41 100.00 263 reject_vc 2 ALIGNMENT 0 YS2-19k19.q1k vc_5 224 62 37 36 C 163 0.00 263 reject_low 8 ALIGNMENT 111 YS2-19k19.q1k chrm 222 39 51464 51648 C 184 98.91 263 accept_chi 0 ALIGNMENT 41 YS2-19k19.q1k vc_2 263 223 2105 2145 C 41 100.00 263 reject_vc 3 ALIGNMENT 0 YS2-19k19.q1k chrm 263 223 51465 51464 C 41 0.00 263 accept_chi 0 ALIGNMENT 0 YS2-19k19.q1k vc_7 62 225 13525 13524 F 164 0.00 263 reject_low 7 ALIGNMENT 0 YS2-19k19.q1k vc_3 222 62 2513 2512 C 161 0.00 263 reject_vc 4 ALIGNMENT 94 YS2-19k19.p1k chrm 37 218 51464 51648 F 182 94.51 225 accept_chi 1 ALIGNMENT 0 YS2-19k19.q1k vc_5 224 62 5064 5063 C 163 0.00 263 reject_low 6 ALIGNMENT 36 YS2-19k19.q1k vc_5 260 225 1 36 C 36 100.00 263 reject_low 8 ALIGNMENT 39 YS2-19k19.q1k vc_5 263 225 5025 5063 C 39 100.00 263 reject_low 6 ALIGNMENT 41 YS2-19k19.q1k vc_3 263 223 2472 2512 C 41 100.00 263 reject_vc 4 ALIGNMENT 0 YS2-19k19.q1k vc_1 222 62 2513 2512 C 161 0.00 263 reject_vc 2 ALIGNMENT 41 YS2-19k19.q1k vc_4 223 263 5831 5871 F 41 100.00 263 reject_vc 5 ALIGNMENT 38 YS2-19k19.q1k vc_7 226 263 13525 13562 F 38 100.00 263 reject_low 7 ALIGNMENT 987 YS2-19k21.p1k chr02 26 1213 13192 14389 F 1188 95.88 1215 accept 0 ALIGNMENT 916 YS2-19k21.q1k chr02 1110 52 17221 18288 C 1059 96.60 1293 accept 0 ALIGNMENT 957 YS2-19k22.p1k chr03 31 1142 286490 287618 F 1112 96.76 1248 accept 0 ALIGNMENT 978 YS2-19k22.q1k chr03 1122 42 287059 288143 C 1081 97.59 1356 accept 0 ALIGNMENT 728 YS2-19k24.q1k chr03 1066 29 287057 288093 C 1038 91.43 1324 accept 0 ALIGNMENT 922 YS2-19l03.p1k chr10 30 1115 133076 134178 F 1086 96.13 1286 accept 0 ALIGNMENT 0 YS2-19l03.q1k chr10 148 92 137670 137669 C 57 0.00 1509 accept 0 ALIGNMENT 269 YS2-19l03.q1k chr10 604 149 137215 137669 C 456 86.84 1509 accept 0 ALIGNMENT 900 YS2-19l04.q1k chr02 38 1045 803915 804922 F 1008 96.92 1416 accept 0 ALIGNMENT 0 YS2-19l04.p1k chr07 62 186 1067750 1067749 F 125 0.00 1268 reject_low 3 ALIGNMENT 54 YS2-19l04.q1k chr02 1043 1175 804773 804922 F 133 84.21 1416 reject_low 2 ALIGNMENT 77 YS2-19l04.p1k chr15 784 1032 23649 23900 F 249 76.31 1268 reject_low 4 ALIGNMENT 0 YS2-19l04.p1k chr07 428 719 1067991 1068288 F 292 0.00 1268 reject_low 3 ALIGNMENT 64 YS2-19l04.p1k chr07 187 427 1067750 1067990 F 241 75.93 1268 reject_low 3 ALIGNMENT 0 YS2-19l04.q1k chr07 62 996 1076135 1076134 F 935 0.00 1416 reject_low 1 ALIGNMENT 0 YS2-19l04.p1k chr15 676 783 23541 23648 F 108 0.00 1268 reject_low 4 ALIGNMENT 25 YS2-19l04.p1k chr15 601 675 23466 23540 F 75 80.00 1268 reject_low 4 ALIGNMENT 0 YS2-19l04.q1k chr02 62 1042 804773 804772 F 981 0.00 1416 reject_low 2 ALIGNMENT 101 YS2-19l04.p1k chr07 720 1034 1068289 1068606 F 315 77.14 1268 reject_low 3 ALIGNMENT 929 YS2-19l04.p1k chr02 1034 35 805733 806736 C 1000 97.70 1268 accept 0 ALIGNMENT 47 YS2-19l04.q1k chr07 997 1045 1076135 1076183 F 49 97.96 1416 reject_low 1 ALIGNMENT 929 YS2-19l04.p1k chr07 1034 35 1076993 1077996 C 1000 97.70 1268 reject_low 1 ALIGNMENT 0 YS2-19l04.p1k chr15 62 600 23466 23465 F 539 0.00 1268 reject_low 4 ALIGNMENT 978 YS2-19l05.q1k chr03 1185 31 256898 258055 C 1155 96.54 1440 accept 0 ALIGNMENT 947 YS2-19l05.p1k chr03 30 1163 256413 257565 F 1134 96.47 1311 accept 0 ALIGNMENT 193 YS2-19l06.p1k vc_4 867 1196 5871 6211 F 330 88.18 1333 reject_low 7 ALIGNMENT 0 YS2-19l06.p1k vc_7 62 866 100 99 F 805 0.00 1333 reject_low 3 ALIGNMENT 0 YS2-19l06.p1k vc_4 62 866 5871 5870 F 805 0.00 1333 reject_low 7 ALIGNMENT 26 YS2-19l06.p1k vc_3 897 867 2441 2472 C 31 96.77 1333 reject_low 17 ALIGNMENT 0 YS2-19l06.q1k vc_3 860 62 2512 2511 C 799 0.00 1412 reject_low 20 ALIGNMENT 0 YS2-19l06.q1k vc_5 861 62 5064 5063 C 800 0.00 1412 reject_low 21 ALIGNMENT 40 YS2-19l06.q1k vc_3 900 861 2472 2511 C 40 100.00 1412 reject_low 20 ALIGNMENT 107 YS2-19l06.q1k vc_4 900 1057 126 286 F 158 91.14 1412 reject_low 13 ALIGNMENT 0 YS2-19l06.q1k vc_1 860 62 2512 2511 C 799 0.00 1412 reject_low 18 ALIGNMENT 193 YS2-19l06.p1k vc_3 1196 867 1765 2105 C 330 88.18 1333 reject_low 6 ALIGNMENT 193 YS2-19l06.p1k vc_5 1196 867 4685 5025 C 330 88.18 1333 reject_low 2 ALIGNMENT 0 YS2-19l06.q1k vc_4 899 62 5813 5812 C 838 0.00 1412 reject_low 12 ALIGNMENT 193 YS2-19l06.p1k vc_7 867 1196 100 440 F 330 88.18 1333 reject_low 3 ALIGNMENT 0 YS2-19l06.q1k vc_5 62 899 2398 2397 F 838 0.00 1412 reject_low 2 ALIGNMENT 193 YS2-19l06.p1k vc_7 867 1196 13562 13902 F 330 88.18 1333 reject_low 8 ALIGNMENT 0 YS2-19l06.p1k vc_3 866 62 2473 2472 C 805 0.00 1333 reject_low 17 ALIGNMENT 816 YS2-19l06.q1k chr02 40 860 268211 269031 F 821 99.88 1412 accept_chi 0 ALIGNMENT 38 YS2-19l06.q1k vc_7 863 900 13525 13562 F 38 100.00 1412 reject_low 22 ALIGNMENT 0 YS2-19l06.q1k vc_1 62 899 2531 2530 F 838 0.00 1412 reject_low 9 ALIGNMENT 193 YS2-19l06.p1k vc_2 1196 867 1765 2105 C 330 88.18 1333 reject_low 5 ALIGNMENT 126 YS2-19l06.q1k vc_3 900 1111 2531 2754 F 212 89.15 1412 reject_low 11 ALIGNMENT 0 YS2-19l06.q1k vc_7 899 62 2728 2727 C 838 0.00 1412 reject_low 3 ALIGNMENT 0 YS2-19l06.q1k vc_4 901 900 5872 6353 F 0 0.00 1412 reject_low 14 ALIGNMENT 0 YS2-19l06.p1k vc_1 866 62 2473 2472 C 805 0.00 1333 reject_low 16 ALIGNMENT 126 YS2-19l06.q1k vc_7 1111 900 2504 2727 C 212 89.15 1412 reject_low 3 ALIGNMENT 0 YS2-19l06.p1k vc_2 866 62 2106 2105 C 805 0.00 1333 reject_low 5 ALIGNMENT 0 YS2-19l06.p1k vc_5 866 62 5026 5025 C 805 0.00 1333 reject_low 2 ALIGNMENT 0 YS2-19l06.q1k vc_2 860 62 2145 2144 C 799 0.00 1412 reject_low 19 ALIGNMENT 0 YS2-19l06.p1k vc_7 62 866 13562 13561 F 805 0.00 1333 reject_low 8 ALIGNMENT 126 YS2-19l06.q1k vc_1 900 1111 2531 2754 F 212 89.15 1412 reject_low 9 ALIGNMENT 40 YS2-19l06.q1k vc_1 900 861 2472 2511 C 40 100.00 1412 reject_low 18 ALIGNMENT 0 YS2-19l06.q1k vc_5 861 62 37 36 C 800 0.00 1412 reject_low 23 ALIGNMENT 36 YS2-19l06.q1k vc_5 897 862 1 36 C 36 100.00 1412 reject_low 23 ALIGNMENT 39 YS2-19l06.q1k vc_5 900 862 5025 5063 C 39 100.00 1412 reject_low 21 ALIGNMENT 26 YS2-19l06.p1k vc_1 897 867 2441 2472 C 31 96.77 1333 reject_low 16 ALIGNMENT 107 YS2-19l06.q1k vc_4 900 1057 6353 6513 F 158 91.14 1412|1,0 reject_low 14 ALIGNMENT 40 YS2-19l06.q1k vc_2 900 861 2105 2144 C 40 100.00 1412 reject_low 19 ALIGNMENT 126 YS2-19l06.q1k vc_5 900 1111 2398 2621 F 212 89.15 1412 reject_low 2 ALIGNMENT 0 YS2-19l06.p1k vc_3 866 62 2106 2105 C 805 0.00 1333 reject_low 6 ALIGNMENT 0 YS2-19l06.q1k vc_4 62 860 5832 5831 F 799 0.00 1412 reject_low 14 ALIGNMENT 63 YS2-19l06.q1k vc_4 985 900 1450 1534 C 86 91.86 1412 reject_low 15 ALIGNMENT 0 YS2-19l06.q1k vc_3 62 899 2531 2530 F 838 0.00 1412 reject_low 11 ALIGNMENT 120 YS2-19l06.q1k vc_4 1101 900 5600 5812 C 202 89.11 1412 reject_low 12 ALIGNMENT 0 YS2-19l06.q1k vc_4 62 899 126 125 F 838 0.00 1412 reject_low 13 ALIGNMENT 0 YS2-19l06.q1k vc_7 62 862 13525 13524 F 801 0.00 1412 reject_low 22 ALIGNMENT 0 YS2-19l06.p1k vc_1 866 62 2106 2105 C 805 0.00 1333 reject_low 4 ALIGNMENT 40 YS2-19l06.q1k vc_4 861 900 5832 5871 F 40 100.00 1412 reject_low 14 ALIGNMENT 126 YS2-19l06.q1k vc_2 900 1111 2164 2387 F 212 89.15 1412 reject_low 10 ALIGNMENT 193 YS2-19l06.p1k vc_1 1196 867 1765 2105 C 330 88.18 1333 reject_low 4 ALIGNMENT 0 YS2-19l06.q1k vc_2 62 899 2164 2163 F 838 0.00 1412 reject_low 10 ALIGNMENT 0 YS2-19l06.q1k vc_4 899 62 1535 1534 C 838 0.00 1412 reject_low 15 ALIGNMENT 812 YS2-19l06.p1k chr02 849 30 268211 269031 C 820 99.88 1333 accept_chi 1 ALIGNMENT 1010 YS2-19l10.q1k chr15 39 1248 327932 329163 F 1210 94.71 1496 accept 0 ALIGNMENT 1023 YS2-19l10.p1k chr15 1196 31 328795 329963 C 1166 96.91 1371 accept 0 ALIGNMENT 0 YS2-19l11.p1k chr12 62 290 472464 472463 F 229 0.00 1309 reject_low 4 ALIGNMENT 119 YS2-19l11.p1k chr12 291 409 482044 482162 F 119 100.00 1309 reject_low 5 ALIGNMENT 119 YS2-19l11.p1k chr12 291 409 472464 472582 F 119 100.00 1309 reject_low 4 ALIGNMENT 0 YS2-19l11.p1k chr12 410 883 472582 472581 F 474 0.00 1309 reject_low 4 ALIGNMENT 119 YS2-19l11.p1k chr12 291 409 485696 485814 F 119 100.00 1309 reject_low 6 ALIGNMENT 0 YS2-19l11.p1k chr12 62 290 485696 485695 F 229 0.00 1309 reject_low 6 ALIGNMENT 792 YS2-19l11.p1k chr12 29 1105 459413 460542 F 1077 93.41 1309 accept 0 ALIGNMENT 0 YS2-19l11.p1k chr12 410 883 468930 468929 F 474 0.00 1309 reject_low 2 ALIGNMENT 0 YS2-19l11.p1k chr12 410 883 485814 485813 F 474 0.00 1309 reject_low 6 ALIGNMENT 128 YS2-19l11.p1k chr12 291 424 489348 489481 F 134 98.51 1309 reject_low 3 ALIGNMENT 931 YS2-19l11.q1k chr12 1066 40 452484 453526 C 1027 97.57 1421 reject_low 1 ALIGNMENT 931 YS2-19l11.q1k chr12 1066 40 461621 462663 C 1027 97.57 1421 accept 0 ALIGNMENT 0 YS2-19l11.p1k chr12 425 883 489481 489480 F 459 0.00 1309 reject_low 3 ALIGNMENT 0 YS2-19l11.p1k chr12 410 883 482162 482161 F 474 0.00 1309 reject_low 5 ALIGNMENT 0 YS2-19l11.p1k chr12 62 290 482044 482043 F 229 0.00 1309 reject_low 5 ALIGNMENT 370 YS2-19l11.p1k chr12 29 409 468550 468930 F 381 99.74 1309 reject_low 2 ALIGNMENT 0 YS2-19l11.p1k chr12 62 290 489348 489347 F 229 0.00 1309 reject_low 3 ALIGNMENT 0 YS2-19l12.p1k chr03 219 237 214506 214505 F 19 0.00 237 accept 0 ALIGNMENT 172 YS2-19l12.p1k chr03 29 218 214316 214506 F 190 97.89 237 accept 0 ALIGNMENT 935 YS2-19l13.p1k chr07 1127 31 763889 765000 C 1097 96.26 1294 reject_low 1 ALIGNMENT 902 YS2-19l13.q1k chr16 40 1126 835148 836249 F 1087 96.60 1396 accept 0 ALIGNMENT 926 YS2-19l13.p1k chr16 1127 31 838024 839135 C 1097 95.99 1294 accept 0 ALIGNMENT 974 YS2-19l14.p1k chr04 1137 30 65213 66335 C 1108 97.38 1292 accept 0 ALIGNMENT 946 YS2-19l14.q1k chr04 40 1101 64130 65209 F 1062 97.08 1352 accept 0 ALIGNMENT 865 YS2-19l15.q1k chr05 47 1003 213365 214332 F 957 98.12 1319 accept 0 ALIGNMENT 1032 YS2-19l15.p1k chr05 1215 35 215674 216868 C 1181 97.12 1319 accept 0 ALIGNMENT 892 YS2-19l16.q1k chr12 38 1111 459108 460201 F 1074 95.72 1400 reject_bad_break 0 ALIGNMENT 0 YS2-19l16.q1k chr06 839 346 31623 31622 C 494 0.00 1400 reject_low 4 ALIGNMENT 0 YS2-19l16.q1k chr12 724 839 472582 472581 F 116 0.00 1400 reject_low 5 ALIGNMENT 531 YS2-19l16.p1k chr12 1207 543 489869 490543 C 665 94.14 1333 reject_low 2 ALIGNMENT 0 YS2-19l16.q1k chr12 62 604 482044 482043 F 543 0.00 1400 reject_low 6 ALIGNMENT 119 YS2-19l16.q1k chr12 605 723 482044 482162 F 119 100.00 1400 reject_low 6 ALIGNMENT 0 YS2-19l16.q1k chr12 724 839 468930 468929 F 116 0.00 1400 reject_low 3 ALIGNMENT 0 YS2-19l16.p1k chr12 542 62 490544 490543 C 481 0.00 1333 reject_low 2 ALIGNMENT 0 YS2-19l16.q1k chr12 62 604 472464 472463 F 543 0.00 1400 reject_low 5 ALIGNMENT 0 YS2-19l16.q1k chr12 724 839 485814 485813 F 116 0.00 1400 reject_low 7 ALIGNMENT 1060 YS2-19l16.p1k chr12 1225 29 451880 453089 C 1197 96.83 1333 reject_low 1 ALIGNMENT 0 YS2-19l16.q1k chr12 62 604 489348 489347 F 543 0.00 1400 reject_low 2 ALIGNMENT 0 YS2-19l16.q1k chr12 739 839 489481 489480 F 101 0.00 1400 reject_low 2 ALIGNMENT 119 YS2-19l16.q1k chr12 605 723 472464 472582 F 119 100.00 1400 reject_low 5 ALIGNMENT 0 YS2-19l16.q1k chr12 1112 1111 460202 460219 F 0 0.00 1400 reject_bad_break 0 ALIGNMENT 119 YS2-19l16.q1k chr12 605 723 485696 485814 F 119 100.00 1400 reject_low 7 ALIGNMENT 0 YS2-19l16.q1k chr12 62 604 485696 485695 F 543 0.00 1400 reject_low 7 ALIGNMENT 30 YS2-19l16.q1k chr12 1112 1228 460220 460347 F 117 80.34 1400 reject_bad_break 0 ALIGNMENT 128 YS2-19l16.q1k chr12 605 738 489348 489481 F 134 98.51 1400 reject_low 2 ALIGNMENT 654 YS2-19l16.q1k chr12 38 723 468245 468930 F 686 99.56 1400 reject_low 3 ALIGNMENT 1060 YS2-19l16.p1k chr12 1225 29 461017 462226 C 1197 96.83 1333 reject_bad_break 0 ALIGNMENT 94 YS2-19l16.q1k chr06 345 238 31622 31729 C 108 98.15 1400 reject_low 4 ALIGNMENT 0 YS2-19l16.q1k chr12 724 839 482162 482161 F 116 0.00 1400 reject_low 6 ALIGNMENT 0 YS2-19l16.q1k chr06 237 62 31730 31729 C 176 0.00 1400 reject_low 4 ALIGNMENT 954 YS2-19l17.q1k chr16 32 1141 835148 836260 F 1110 96.94 1431 accept 0 ALIGNMENT 881 YS2-19l17.p1k chr07 1092 35 763930 765000 C 1058 95.75 1243 reject_low 1 ALIGNMENT 872 YS2-19l17.p1k chr16 1092 35 838065 839135 C 1058 95.46 1243 accept 0 ALIGNMENT 51 YS2-19l18.q1k chr02 33 110 7992 8069 F 78 89.74 436 reject_low 5 ALIGNMENT 0 YS2-19l18.q1k vc_5 393 62 5068 5067 C 332 0.00 436 reject_low 16 ALIGNMENT 0 YS2-19l18.q1k chr02 111 436 8069 8068 F 326 0.00 436 reject_low 5 ALIGNMENT 51 YS2-19l18.p1k chr14 322 399 781817 781894 F 78 89.74 418 reject_low 10 ALIGNMENT 0 YS2-19l18.q1k chr14 436 111 781818 781817 C 326 0.00 436 reject_low 11 ALIGNMENT 0 YS2-19l18.p1k chr14 400 418 781894 781893 F 19 0.00 418 reject_low 10 ALIGNMENT 0 YS2-19l18.q1k vc_3 395 62 2513 2512 C 334 0.00 436 reject_low 14 ALIGNMENT 0 YS2-19l18.p1k chr14 62 321 781817 781816 F 260 0.00 418 reject_low 10 ALIGNMENT 361 YS2-19l18.q1k chr02 397 33 808663 809027 C 365 100.00 436 ambiguous_tel 1 ALIGNMENT 0 YS2-19l18.q1k vc_4 62 395 5831 5830 F 334 0.00 436 reject_low 15 ALIGNMENT 0 YS2-19l18.p1k chr03 62 321 307696 307695 F 260 0.00 418 reject_low 6 ALIGNMENT 41 YS2-19l18.q1k vc_4 396 436 5831 5871 F 41 100.00 436 reject_low 15 ALIGNMENT 0 YS2-19l18.p1k chr02 321 62 8070 8069 C 260 0.00 418 reject_low 4 ALIGNMENT 0 YS2-19l18.q1k chr02 436 398 808664 808663 C 39 0.00 436 ambiguous_tel 1 ALIGNMENT 41 YS2-19l18.q1k vc_1 436 396 2472 2512 C 41 100.00 436 reject_low 12 ALIGNMENT 0 YS2-19l18.q1k vc_5 393 62 41 40 C 332 0.00 436 reject_low 18 ALIGNMENT 0 YS2-19l18.p1k chr12 418 400 13470 13469 C 19 0.00 418 reject_low 8 ALIGNMENT 354 YS2-19l18.q1k chr07 397 33 1079923 1080288 C 365 99.45 436 ambiguous_tel 3 ALIGNMENT 51 YS2-19l18.q1k chr03 110 33 307696 307773 C 78 89.74 436 reject_low 7 ALIGNMENT 51 YS2-19l18.p1k chr12 399 322 13469 13546 C 78 89.74 418 reject_low 8 ALIGNMENT 37 YS2-19l18.q1k vc_5 433 394 1 40 C 40 97.50 436 reject_low 18 ALIGNMENT 51 YS2-19l18.p1k chr03 322 399 307696 307773 F 78 89.74 418 reject_low 6 ALIGNMENT 0 YS2-19l18.p1k chr12 321 62 13547 13546 C 260 0.00 418 reject_low 8 ALIGNMENT 0 YS2-19l18.p1k chr03 400 418 307773 307772 F 19 0.00 418 reject_low 6 ALIGNMENT 0 YS2-19l18.q1k vc_2 395 62 2146 2145 C 334 0.00 436 reject_low 13 ALIGNMENT 0 YS2-19l18.q1k chr07 436 398 1079924 1079923 C 39 0.00 436 ambiguous_tel 3 ALIGNMENT 0 YS2-19l18.q1k chr03 436 111 307697 307696 C 326 0.00 436 reject_low 7 ALIGNMENT 40 YS2-19l18.q1k vc_5 436 394 5025 5067 C 43 97.67 436 reject_low 16 ALIGNMENT 0 YS2-19l18.p1k chr07 400 418 1080288 1080287 F 19 0.00 418 ambiguous_tel 2 ALIGNMENT 38 YS2-19l18.q1k vc_7 399 436 13525 13562 F 38 100.00 436 reject_low 17 ALIGNMENT 0 YS2-19l18.q1k chr12 111 436 13546 13545 F 326 0.00 436 reject_low 9 ALIGNMENT 51 YS2-19l18.q1k chr12 33 110 13469 13546 F 78 89.74 436 reject_low 9 ALIGNMENT 0 YS2-19l18.p1k chr02 418 400 7993 7992 C 19 0.00 418 reject_low 4 ALIGNMENT 41 YS2-19l18.q1k vc_2 436 396 2105 2145 C 41 100.00 436 reject_low 13 ALIGNMENT 361 YS2-19l18.p1k chr02 35 399 808663 809027 F 365 100.00 418 ambiguous_tel 0 ALIGNMENT 51 YS2-19l18.q1k chr14 110 33 781817 781894 C 78 89.74 436 reject_low 11 ALIGNMENT 354 YS2-19l18.p1k chr07 35 399 1079923 1080288 F 365 99.45 418 ambiguous_tel 2 ALIGNMENT 51 YS2-19l18.p1k chr02 399 322 7992 8069 C 78 89.74 418 reject_low 4 ALIGNMENT 0 YS2-19l18.q1k vc_1 395 62 2513 2512 C 334 0.00 436 reject_low 12 ALIGNMENT 0 YS2-19l18.p1k chr02 400 418 809027 809026 F 19 0.00 418 ambiguous_tel 0 ALIGNMENT 0 YS2-19l18.q1k vc_7 62 398 13525 13524 F 337 0.00 436 reject_low 17 ALIGNMENT 41 YS2-19l18.q1k vc_3 436 396 2472 2512 C 41 100.00 436 reject_low 14 ALIGNMENT 0 YS2-19l19.q1k chr03 914 158 271472 271471 C 757 0.00 1390 reject_low 7 ALIGNMENT 23 YS2-19l19.q1k chr03 157 129 271471 271499 C 29 100.00 1390 reject_low 7 ALIGNMENT 0 YS2-19l19.q1k chr02 914 158 272524 272523 C 757 0.00 1390 reject_low 3 ALIGNMENT 0 YS2-19l19.q1k chr05 914 159 309001 309000 C 756 0.00 1390 reject_low 6 ALIGNMENT 0 YS2-19l19.q1k chr05 130 62 309028 309027 C 69 0.00 1390 reject_low 6 ALIGNMENT 0 YS2-19l19.q1k chr02 104 62 541506 541505 C 43 0.00 1390 reject_low 1 ALIGNMENT 0 YS2-19l19.q1k chr02 914 161 541451 541450 C 754 0.00 1390 reject_low 1 ALIGNMENT 0 YS2-19l19.q1k chr08 107 62 365415 365414 C 46 0.00 1390 reject_low 5 ALIGNMENT 0 YS2-19l19.q1k chr02 97 62 272583 272582 C 36 0.00 1390 reject_low 3 ALIGNMENT 0 YS2-19l19.q1k chr04 159 914 604285 604284 F 756 0.00 1390 reject_low 4 ALIGNMENT 0 YS2-19l19.q1k chr03 128 62 271500 271499 C 67 0.00 1390 reject_low 7 ALIGNMENT 0 YS2-19l19.q1k chr04 103 62 810774 810773 C 42 0.00 1390 reject_low 2 ALIGNMENT 25 YS2-19l19.q1k chr05 158 131 309000 309027 C 28 100.00 1390 reject_low 6 ALIGNMENT 1052 YS2-19l19.q1k chr04 1283 38 1037495 1038766 C 1246 96.39 1390 accept 0 ALIGNMENT 21 YS2-19l19.q1k chr09 126 155 153581 153610 F 30 96.67 1390 reject_low 8 ALIGNMENT 22 YS2-19l19.q1k chr02 157 98 272523 272582 C 60 83.33 1390 reject_low 3 ALIGNMENT 32 YS2-19l19.q1k chr04 153 104 810724 810773 C 50 92.00 1390 reject_low 2 ALIGNMENT 1006 YS2-19l19.p1k chr04 33 1202 1034201 1035381 F 1170 96.84 1311 accept 0 ALIGNMENT 0 YS2-19l19.q1k chr04 62 110 604238 604237 F 49 0.00 1390 reject_low 4 ALIGNMENT 0 YS2-19l19.q1k chr09 156 914 153610 153609 F 759 0.00 1390 reject_low 8 ALIGNMENT 25 YS2-19l19.q1k chr04 111 158 604238 604285 F 48 87.50 1390 reject_low 4 ALIGNMENT 0 YS2-19l19.q1k chr08 914 158 365366 365365 C 757 0.00 1390 reject_low 5 ALIGNMENT 0 YS2-19l19.q1k chr04 914 154 810725 810724 C 761 0.00 1390 reject_low 2 ALIGNMENT 38 YS2-19l19.q1k chr02 160 105 541450 541505 C 56 92.86 1390 reject_low 1 ALIGNMENT 0 YS2-19l19.q1k chr09 62 125 153581 153580 F 64 0.00 1390 reject_low 8 ALIGNMENT 23 YS2-19l19.q1k chr08 157 108 365365 365414 C 50 86.00 1390 reject_low 5 ALIGNMENT 1021 YS2-19l21.p1k chr09 1251 40 212990 214211 C 1212 94.97 1276 accept 0 ALIGNMENT 0 YS2-19l22.q1k vc_5 361 62 5064 5063 C 300 0.00 400 reject_low 5 ALIGNMENT 38 YS2-19l22.q1k vc_7 363 400 13525 13562 F 38 100.00 400 reject_low 6 ALIGNMENT 0 YS2-19l22.q1k chr07 400 361 244073 244072 C 40 0.00 400 accept_chi 1 ALIGNMENT 0 YS2-19l22.q1k vc_3 359 62 2513 2512 C 298 0.00 400 reject_low 3 ALIGNMENT 0 YS2-19l22.q1k vc_4 62 359 5831 5830 F 298 0.00 400 reject_low 4 ALIGNMENT 0 YS2-19l22.p1k chr07 370 388 244404 244403 F 19 0.00 388 accept_chi 0 ALIGNMENT 36 YS2-19l22.q1k vc_5 397 362 1 36 C 36 100.00 400 reject_low 7 ALIGNMENT 0 YS2-19l22.q1k vc_1 359 62 2513 2512 C 298 0.00 400 reject_low 2 ALIGNMENT 41 YS2-19l22.q1k vc_1 400 360 2472 2512 C 41 100.00 400 reject_low 2 ALIGNMENT 41 YS2-19l22.q1k vc_4 360 400 5831 5871 F 41 100.00 400 reject_low 4 ALIGNMENT 0 YS2-19l22.q1k vc_5 361 62 37 36 C 300 0.00 400 reject_low 7 ALIGNMENT 39 YS2-19l22.q1k vc_5 400 362 5025 5063 C 39 100.00 400 reject_low 5 ALIGNMENT 41 YS2-19l22.q1k vc_3 400 360 2472 2512 C 41 100.00 400 reject_low 3 ALIGNMENT 322 YS2-19l22.p1k chr07 37 369 244072 244404 F 333 100.00 388 accept_chi 0 ALIGNMENT 319 YS2-19l22.q1k chr07 360 31 244072 244401 C 330 100.00 400 accept_chi 1 ALIGNMENT 0 YS2-19l22.q1k vc_7 62 362 13525 13524 F 301 0.00 400 reject_low 6 ALIGNMENT 1012 YS2-19l23.p1k chr07 1187 39 855285 856448 C 1149 96.69 1236 accept 0 ALIGNMENT 0 YS2-19m01.q1k vc_5 160 94 5064 5063 C 67 0.00 1419 reject_low 14 ALIGNMENT 0 YS2-19m01.q1k vc_7 200 404 13562 13561 F 205 0.00 1419 reject_low 15 ALIGNMENT 47 YS2-19m01.q1k vc_7 411 360 6360 6411 C 52 98.08 1419|1,0 reject_low 8 ALIGNMENT 0 YS2-19m01.q1k vc_4 198 94 5813 5812 C 105 0.00 1419 reject_low 2 ALIGNMENT 465 YS2-19m01.q1k vc_5 199 902 2398 3096 F 704 89.49 1419 reject_vc 0 ALIGNMENT 383 YS2-19m01.q1k vc_3 199 659 2531 2990 F 461 94.79 1419 reject_low 6 ALIGNMENT 40 YS2-19m01.q1k vc_4 156 199 5828 5871 F 44 97.73 1419 reject_low 9 ALIGNMENT 144 YS2-19m01.q1k vc_4 199 361 6353 6514 F 163 96.93 1419|1,0 reject_low 9 ALIGNMENT 0 YS2-19m01.q1k vc_5 404 197 2 1 C 208 0.00 1419 reject_low 16 ALIGNMENT 55 YS2-19m01.q1k vc_4 659 597 6275 6337 C 63 96.83 1419 reject_low 13 ALIGNMENT 95 YS2-19m01.q1k chr04 35 161 165509 165636 F 127 92.13 1419 reject_low 3 ALIGNMENT 0 YS2-19m01.q1k vc_4 596 94 6338 6337 C 503 0.00 1419 reject_low 13 ALIGNMENT 55 YS2-19m01.q1k vc_4 597 659 1550 1612 F 63 96.83 1419 reject_low 7 ALIGNMENT 0 YS2-19m01.q1k vc_4 660 664 1613 1878 F 5 0.00 1419 reject_low 7 ALIGNMENT 0 YS2-19m01.q1k vc_3 404 200 2473 2472 C 205 0.00 1419 reject_low 12 ALIGNMENT 0 YS2-19m01.q1k chr04 162 404 165636 165635 F 243 0.00 1419 reject_low 3 ALIGNMENT 0 YS2-19m01.q1k vc_4 94 198 126 125 F 105 0.00 1419 reject_low 7 ALIGNMENT 0 YS2-19m01.q1k vc_4 362 404 6514 6513 F 43 0.00 1419 reject_low 9 ALIGNMENT 0 YS2-19m01.q1k vc_2 404 200 2106 2105 C 205 0.00 1419 reject_low 11 ALIGNMENT 0 YS2-19m01.q1k vc_4 198 94 1535 1534 C 105 0.00 1419 reject_low 17 ALIGNMENT 0 YS2-19m01.q1k vc_7 94 161 13525 13524 F 68 0.00 1419 reject_low 15 ALIGNMENT 40 YS2-19m01.q1k vc_3 199 156 2472 2515 C 44 97.73 1419 reject_low 12 ALIGNMENT 0 YS2-19m01.q1k vc_5 160 94 37 36 C 67 0.00 1419 reject_low 16 ALIGNMENT 0 YS2-19m01.q1k vc_3 94 198 2531 2530 F 105 0.00 1419 reject_low 6 ALIGNMENT 35 YS2-19m01.q1k vc_7 162 199 13525 13562 F 38 97.37 1419 reject_low 15 ALIGNMENT 0 YS2-19m01.q1k vc_4 596 289 111 1445 C 308 0.00 1419 reject_low 17 ALIGNMENT 0 YS2-19m01.q1k vc_2 94 198 2164 2163 F 105 0.00 1419 reject_low 5 ALIGNMENT 0 YS2-19m01.q1k vc_1 404 200 2473 2472 C 205 0.00 1419 reject_low 10 ALIGNMENT 0 YS2-19m01.q1k vc_4 362 596 288 1549 F 235 0.00 1419 reject_low 7 ALIGNMENT 0 YS2-19m01.q1k vc_7 198 94 2728 2727 C 105 0.00 1419 reject_vc 1 ALIGNMENT 77 YS2-19m01.q1k vc_4 288 199 1446 1534 C 90 96.67 1419 reject_low 17 ALIGNMENT 84 YS2-19m01.q1k vc_4 665 902 1879 2112 F 238 80.25 1419 reject_low 7 ALIGNMENT 410 YS2-19m01.q1k vc_4 778 199 5233 5812 C 580 90.86 1419 reject_low 2 ALIGNMENT 0 YS2-19m01.q1k vc_4 94 155 5828 5827 F 62 0.00 1419 reject_low 9 ALIGNMENT 191 YS2-19m01.q1k vc_7 659 410 4923 5172 C 250 92.40 1419|0,1 reject_low 8 ALIGNMENT 36 YS2-19m01.q1k vc_5 199 161 5025 5063 C 39 97.44 1419 reject_low 14 ALIGNMENT 40 YS2-19m01.q1k vc_1 199 156 2472 2515 C 44 97.73 1419 reject_low 10 ALIGNMENT 0 YS2-19m01.q1k vc_2 155 94 2149 2148 C 62 0.00 1419 reject_low 11 ALIGNMENT 0 YS2-19m01.q1k vc_5 404 200 5026 5025 C 205 0.00 1419 reject_low 14 ALIGNMENT 144 YS2-19m01.q1k vc_4 199 361 126 287 F 163 96.93 1419 reject_low 7 ALIGNMENT 0 YS2-19m01.q1k vc_7 359 94 6412 6411 C 266 0.00 1419 reject_low 8 ALIGNMENT 0 YS2-19m01.q1k vc_4 200 199 5872 6353 F 0 0.00 1419 reject_low 9 ALIGNMENT 55 YS2-19m01.q1k vc_4 659 597 48 110 C 63 96.83 1419 reject_low 17 ALIGNMENT 0 YS2-19m01.q1k vc_3 155 94 2516 2515 C 62 0.00 1419 reject_low 12 ALIGNMENT 383 YS2-19m01.q1k vc_2 199 659 2164 2623 F 461 94.79 1419 reject_low 5 ALIGNMENT 0 YS2-19m01.q1k vc_1 155 94 2516 2515 C 62 0.00 1419 reject_low 10 ALIGNMENT 0 YS2-19m01.q1k vc_1 94 198 2531 2530 F 105 0.00 1419 reject_low 4 ALIGNMENT 0 YS2-19m01.q1k vc_5 94 198 2398 2397 F 105 0.00 1419 reject_vc 0 ALIGNMENT 40 YS2-19m01.q1k vc_2 199 156 2105 2148 C 44 97.73 1419 reject_low 11 ALIGNMENT 0 YS2-19m01.q1k vc_7 410 411 5172 6360 C 0 0.00 1419 reject_low 8 ALIGNMENT 383 YS2-19m01.q1k vc_1 199 659 2531 2990 F 461 94.79 1419 reject_low 4 ALIGNMENT 465 YS2-19m01.q1k vc_7 902 199 2029 2727 C 704 89.49 1419 reject_vc 1 ALIGNMENT 33 YS2-19m01.q1k vc_5 196 161 1 36 C 36 97.22 1419 reject_low 16 ALIGNMENT 186 YS2-19m02.p1k chr16 621 117 920610 921091 C 505 82.77 1445 accept 0 ALIGNMENT 491 YS2-19m02.q1k chr16 63 841 916537 917312 F 779 88.58 1362 accept 0 ALIGNMENT 39 YS2-19m04.q1k vc_5 546 508 5025 5063 C 39 100.00 546 reject_vc 4 ALIGNMENT 36 YS2-19m04.q1k vc_5 543 508 1 36 C 36 100.00 546 reject_vc 6 ALIGNMENT 40 YS2-19m04.q1k vc_2 546 507 2105 2144 C 40 100.00 546 reject_vc 1 ALIGNMENT 0 YS2-19m04.q1k vc_4 62 506 5832 5831 F 445 0.00 546 reject_vc 3 ALIGNMENT 0 YS2-19m04.q1k vc_7 62 508 13525 13524 F 447 0.00 546 reject_vc 5 ALIGNMENT 0 YS2-19m04.q1k vc_1 506 62 2512 2511 C 445 0.00 546 reject_vc 0 ALIGNMENT 0 YS2-19m04.q1k vc_2 506 62 2145 2144 C 445 0.00 546 reject_vc 1 ALIGNMENT 0 YS2-19m04.q1k vc_3 506 62 2512 2511 C 445 0.00 546 reject_vc 2 ALIGNMENT 40 YS2-19m04.q1k vc_1 546 507 2472 2511 C 40 100.00 546 reject_vc 0 ALIGNMENT 40 YS2-19m04.q1k vc_4 507 546 5832 5871 F 40 100.00 546 reject_vc 3 ALIGNMENT 40 YS2-19m04.q1k vc_3 546 507 2472 2511 C 40 100.00 546 reject_vc 2 ALIGNMENT 38 YS2-19m04.q1k vc_7 509 546 13525 13562 F 38 100.00 546 reject_vc 5 ALIGNMENT 0 YS2-19m04.q1k vc_5 507 62 5064 5063 C 446 0.00 546 reject_vc 4 ALIGNMENT 0 YS2-19m04.q1k vc_5 507 62 37 36 C 446 0.00 546 reject_vc 6 ALIGNMENT 230 YS2-19m05.p1k vc_3 1148 803 1743 2105 C 346 90.46 1265 reject_low 5 ALIGNMENT 0 YS2-19m05.q1k chr06 727 62 143864 143863 C 666 0.00 1332 reject_low 19 ALIGNMENT 0 YS2-19m05.q1k chr16 848 719 560678 560677 C 130 0.00 1332 reject_low 41 ALIGNMENT 0 YS2-19m05.p1k chr13 878 207 372717 372716 C 672 0.00 1265 reject_low 21 ALIGNMENT 41 YS2-19m05.q1k chr06 782 728 143809 143863 C 55 94.55 1332 reject_low 19 ALIGNMENT 0 YS2-19m05.p1k vc_4 92 802 5871 5870 F 711 0.00 1265 reject_low 8 ALIGNMENT 0 YS2-19m05.p1k chr16 228 878 560810 560809 F 651 0.00 1265 reject_low 30 ALIGNMENT 0 YS2-19m05.q1k chr01 62 585 165827 165826 F 524 0.00 1332 reject_low 37 ALIGNMENT 0 YS2-19m05.q1k chr06 848 783 143880 143879 C 66 0.00 1332 reject_low 43 ALIGNMENT 41 YS2-19m05.q1k vc_3 823 783 2472 2512 C 41 100.00 1332 reject_low 16 ALIGNMENT 230 YS2-19m05.p1k vc_1 1148 803 1743 2105 C 346 90.46 1265 reject_low 3 ALIGNMENT 109 YS2-19m05.p1k chr16 226 94 856213 856345 C 133 96.24 1265 reject_low 32 ALIGNMENT 106 YS2-19m05.q1k chr13 586 718 362586 362718 F 133 95.49 1332 reject_low 21 ALIGNMENT 0 YS2-19m05.q1k chr06 585 62 143938 143937 C 524 0.00 1332 reject_low 53 ALIGNMENT 0 YS2-19m05.q1k chr12 62 585 481562 481561 F 524 0.00 1332 reject_low 39 ALIGNMENT 0 YS2-19m05.p1k vc_7 92 802 13562 13561 F 711 0.00 1265 reject_low 7 ALIGNMENT 0 YS2-19m05.p1k chr15 207 878 595132 595131 F 672 0.00 1265 reject_low 35 ALIGNMENT 0 YS2-19m05.q1k chr13 719 848 378416 378415 F 130 0.00 1332 reject_low 48 ALIGNMENT 0 YS2-19m05.q1k chr13 62 585 362586 362585 F 524 0.00 1332 reject_low 21 ALIGNMENT 0 YS2-19m05.q1k chr06 595 62 143857 143856 C 534 0.00 1332 reject_low 50 ALIGNMENT 0 YS2-19m05.q1k vc_7 822 62 2728 2727 C 761 0.00 1332 reject_low 2 ALIGNMENT 0 YS2-19m05.q1k vc_2 62 822 2164 2163 F 761 0.00 1332 reject_low 11 ALIGNMENT 0 YS2-19m05.p1k vc_1 802 92 2473 2472 C 711 0.00 1265 reject_low 51 ALIGNMENT 0 YS2-19m05.p1k chr13 878 229 357003 357002 C 650 0.00 1265 reject_low 31 ALIGNMENT 41 YS2-19m05.q1k vc_4 783 823 5831 5871 F 41 100.00 1332 reject_low 13 ALIGNMENT 112 YS2-19m05.p1k chr01 226 94 160239 160371 C 133 96.99 1265 reject_low 25 ALIGNMENT 0 YS2-19m05.p1k chr13 878 207 378305 378304 C 672 0.00 1265 reject_low 22 ALIGNMENT 230 YS2-19m05.p1k vc_2 1148 803 1743 2105 C 346 90.46 1265 reject_low 4 ALIGNMENT 184 YS2-19m05.q1k vc_1 823 1130 2531 2851 F 308 88.96 1332 reject_low 10 ALIGNMENT 41 YS2-19m05.q1k vc_1 823 783 2472 2512 C 41 100.00 1332 reject_low 14 ALIGNMENT 0 YS2-19m05.p1k vc_1 802 92 2106 2105 C 711 0.00 1265 reject_low 3 ALIGNMENT 0 YS2-19m05.q1k vc_1 62 822 2531 2530 F 761 0.00 1332 reject_low 10 ALIGNMENT 109 YS2-19m05.q1k chr16 586 718 856213 856345 F 133 96.24 1332 reject_low 42 ALIGNMENT 0 YS2-19m05.p1k chr16 227 878 56788 56787 F 652 0.00 1265 reject_low 28 ALIGNMENT 0 YS2-19m05.q1k chr14 719 848 102324 102323 F 130 0.00 1332 reject_low 40 ALIGNMENT 0 YS2-19m05.q1k chr06 595 62 138230 138229 C 534 0.00 1332 reject_low 54 ALIGNMENT 0 YS2-19m05.q1k chr14 62 585 102192 102191 F 524 0.00 1332 reject_low 40 ALIGNMENT 0 YS2-19m05.q1k vc_3 782 62 2513 2512 C 721 0.00 1332 reject_low 16 ALIGNMENT 0 YS2-19m05.q1k chr14 848 719 519366 519365 C 130 0.00 1332 reject_low 49 ALIGNMENT 0 YS2-19m05.q1k chr06 848 783 143810 143809 C 66 0.00 1332 reject_low 19 ALIGNMENT 101 YS2-19m05.p1k chr15 94 206 595020 595132 F 113 98.23 1265 reject_low 35 ALIGNMENT 106 YS2-19m05.p1k chr13 94 226 196536 196668 F 133 95.49 1265 reject_low 34 ALIGNMENT 110 YS2-19m05.q1k chr16 718 585 560677 560810 C 134 96.27 1332 reject_low 41 ALIGNMENT 101 YS2-19m05.q1k chr13 606 718 372716 372828 F 113 98.23 1332 reject_low 22 ALIGNMENT 0 YS2-19m05.q1k chr07 848 719 541558 541557 C 130 0.00 1332 reject_low 44 ALIGNMENT 0 YS2-19m05.q1k chr06 848 710 138119 138118 C 139 0.00 1332 reject_low 54 ALIGNMENT 0 YS2-19m05.p1k chr16 227 878 62375 62374 F 652 0.00 1265 reject_low 29 ALIGNMENT 0 YS2-19m05.p1k chr13 227 878 196668 196667 F 652 0.00 1265 reject_low 34 ALIGNMENT 0 YS2-19m05.q1k chr06 727 657 138237 143866 C 71 0.00 1332 reject_low 53 ALIGNMENT 101 YS2-19m05.q1k chr13 718 606 184369 184481 C 113 98.23 1332 reject_low 47 ALIGNMENT 0 YS2-19m05.q1k chr16 719 848 856345 856344 F 130 0.00 1332 reject_low 42 ALIGNMENT 654 YS2-19m05.q1k chr12 29 724 817515 818211 F 696 99.57 1332 accept_chi 1 ALIGNMENT 0 YS2-19m05.p1k chr16 878 227 856214 856213 C 652 0.00 1265 reject_low 32 ALIGNMENT 230 YS2-19m05.p1k vc_7 803 1148 13562 13924 F 346 90.46 1265 reject_low 7 ALIGNMENT 230 YS2-19m05.p1k vc_5 1148 803 4663 5025 C 346 90.46 1265 reject_low 6 ALIGNMENT 0 YS2-19m05.q1k chr10 848 719 472583 472582 C 130 0.00 1332 reject_low 45 ALIGNMENT 112 YS2-19m05.q1k chr12 586 718 481562 481694 F 133 96.99 1332 reject_low 39 ALIGNMENT 0 YS2-19m05.p1k chr01 878 227 165828 165827 C 652 0.00 1265 reject_low 18 ALIGNMENT 112 YS2-19m05.p1k chr14 226 94 102192 102324 C 133 96.99 1265 reject_low 27 ALIGNMENT 0 YS2-19m05.q1k vc_4 62 822 126 125 F 761 0.00 1332 reject_low 17 ALIGNMENT 94 YS2-19m05.q1k chr14 718 583 524931 525066 C 136 91.91 1332 reject_low 23 ALIGNMENT 227 YS2-19m05.p1k vc_4 803 1135 5871 6219 F 333 90.99 1265 reject_low 8 ALIGNMENT 0 YS2-19m05.q1k vc_4 822 62 1535 1534 C 761 0.00 1332 reject_low 24 ALIGNMENT 0 YS2-19m05.p1k vc_1 878 834 2442 2441 C 45 0.00 1265 reject_low 51 ALIGNMENT 0 YS2-19m05.q1k chr01 62 585 160239 160238 F 524 0.00 1332 reject_low 18 ALIGNMENT 0 YS2-19m05.q1k chr06 727 710 138237 143744 C 18 0.00 1332 reject_low 50 ALIGNMENT 0 YS2-19m05.q1k chr12 719 848 481694 481693 F 130 0.00 1332 reject_low 39 ALIGNMENT 112 YS2-19m05.q1k chr01 586 718 160239 160371 F 133 96.99 1332 reject_low 18 ALIGNMENT 106 YS2-19m05.p1k chr07 94 226 541557 541689 F 133 95.49 1265 reject_low 33 ALIGNMENT 0 YS2-19m05.p1k vc_3 878 834 2442 2441 C 45 0.00 1265 reject_low 52 ALIGNMENT 659 YS2-19m05.p1k chr12 784 88 817515 818211 C 697 99.71 1265 accept_chi 0 ALIGNMENT 112 YS2-19m05.p1k chr05 226 94 448980 449112 C 133 96.99 1265 reject_low 26 ALIGNMENT 0 YS2-19m05.p1k chr01 878 227 160240 160239 C 652 0.00 1265 reject_low 25 ALIGNMENT 0 YS2-19m05.p1k vc_2 802 92 2106 2105 C 711 0.00 1265 reject_low 4 ALIGNMENT 0 YS2-19m05.q1k chr16 584 62 560811 560810 C 523 0.00 1332 reject_low 41 ALIGNMENT 42 YS2-19m05.q1k chr06 656 586 143867 143937 C 71 90.14 1332 reject_low 53 ALIGNMENT 0 YS2-19m05.q1k chr13 62 605 378304 378303 F 544 0.00 1332 reject_low 48 ALIGNMENT 112 YS2-19m05.p1k chr16 94 226 56656 56788 F 133 96.99 1265 reject_low 28 ALIGNMENT 0 YS2-19m05.q1k chr12 725 848 818211 818210 F 124 0.00 1332 accept_chi 1 ALIGNMENT 0 YS2-19m05.q1k chr13 605 62 184482 184481 C 544 0.00 1332 reject_low 47 ALIGNMENT 41 YS2-19m05.q1k vc_2 823 783 2105 2145 C 41 100.00 1332 reject_low 15 ALIGNMENT 0 YS2-19m05.q1k vc_3 62 822 2531 2530 F 761 0.00 1332 reject_low 12 ALIGNMENT 106 YS2-19m05.q1k chr10 718 586 472582 472714 C 133 95.49 1332 reject_low 45 ALIGNMENT 0 YS2-19m05.q1k chr13 719 848 357136 357135 F 130 0.00 1332 reject_low 20 ALIGNMENT 0 YS2-19m05.p1k chr05 878 227 448981 448980 C 652 0.00 1265 reject_low 26 ALIGNMENT 0 YS2-19m05.p1k vc_3 802 92 2106 2105 C 711 0.00 1265 reject_low 5 ALIGNMENT 108 YS2-19m05.q1k chr13 584 718 357002 357136 F 135 95.56 1332 reject_low 20 ALIGNMENT 21 YS2-19m05.q1k chr06 782 735 143879 143927 C 48 85.42 1332 reject_low 43 ALIGNMENT 0 YS2-19m05.q1k chr10 585 62 472715 472714 C 524 0.00 1332 reject_low 45 ALIGNMENT 184 YS2-19m05.q1k vc_2 823 1130 2164 2484 F 308 88.96 1332 reject_low 11 ALIGNMENT 106 YS2-19m05.p1k chr13 226 94 362586 362718 C 133 95.49 1265 reject_low 20 ALIGNMENT 26 YS2-19m05.p1k vc_3 833 803 2441 2472 C 31 96.77 1265 reject_low 52 ALIGNMENT 0 YS2-19m05.q1k vc_2 782 62 2146 2145 C 721 0.00 1332 reject_low 15 ALIGNMENT 0 YS2-19m05.p1k vc_7 92 802 100 99 F 711 0.00 1265 reject_low 2 ALIGNMENT 112 YS2-19m05.p1k chr16 94 226 62243 62375 F 133 96.99 1265 reject_low 29 ALIGNMENT 184 YS2-19m05.q1k vc_7 1130 823 2407 2727 C 308 88.96 1332 reject_low 2 ALIGNMENT 0 YS2-19m05.p1k chr07 227 878 541689 541688 F 652 0.00 1265 reject_low 33 ALIGNMENT 0 YS2-19m05.q1k vc_2 848 824 2106 2105 C 25 0.00 1332 reject_low 15 ALIGNMENT 0 YS2-19m05.q1k chr13 848 719 184370 184369 C 130 0.00 1332 reject_low 47 ALIGNMENT 0 YS2-19m05.q1k chr13 62 605 372716 372715 F 544 0.00 1332 reject_low 22 ALIGNMENT 0 YS2-19m05.q1k vc_1 782 62 2513 2512 C 721 0.00 1332 reject_low 14 ALIGNMENT 0 YS2-19m05.q1k chr05 62 585 448980 448979 F 524 0.00 1332 reject_low 38 ALIGNMENT 69 YS2-19m05.q1k vc_4 908 823 1446 1534 C 86 95.35 1332 reject_low 24 ALIGNMENT 112 YS2-19m05.p1k chr01 226 94 165827 165959 C 133 96.99 1265 reject_low 18 ALIGNMENT 0 YS2-19m05.q1k chr14 582 62 525067 525066 C 521 0.00 1332 reject_low 23 ALIGNMENT 0 YS2-19m05.q1k chr10 848 719 483755 483754 C 130 0.00 1332 reject_low 46 ALIGNMENT 106 YS2-19m05.q1k chr07 718 586 541557 541689 C 133 95.49 1332 reject_low 44 ALIGNMENT 112 YS2-19m05.q1k chr05 586 718 448980 449112 F 133 96.99 1332 reject_low 38 ALIGNMENT 108 YS2-19m05.p1k chr13 228 94 357002 357136 C 135 95.56 1265 reject_low 31 ALIGNMENT 0 YS2-19m05.q1k chr01 719 848 160371 160370 F 130 0.00 1332 reject_low 18 ALIGNMENT 0 YS2-19m05.q1k vc_1 848 824 2473 2472 C 25 0.00 1332 reject_low 14 ALIGNMENT 130 YS2-19m05.q1k vc_4 823 980 126 287 F 158 95.57 1332 reject_low 17 ALIGNMENT 0 YS2-19m05.q1k chr06 848 783 138183 138182 C 66 0.00 1332 reject_low 50,53 ALIGNMENT 130 YS2-19m05.q1k vc_4 823 980 6353 6514 F 158 95.57 1332|1,0 reject_low 13 ALIGNMENT 185 YS2-19m05.q1k vc_4 1130 823 5490 5812 C 308 89.29 1332 reject_low 9 ALIGNMENT 112 YS2-19m05.q1k chr14 586 718 102192 102324 F 133 96.99 1332 reject_low 40 ALIGNMENT 0 YS2-19m05.p1k chr14 230 878 525066 525065 F 649 0.00 1265 reject_low 36 ALIGNMENT 0 YS2-19m05.p1k chr13 878 227 362587 362586 C 652 0.00 1265 reject_low 20 ALIGNMENT 41 YS2-19m05.q1k chr06 782 728 138182 138236 C 55 94.55 1332 reject_low 50,53 ALIGNMENT 0 YS2-19m05.q1k chr16 62 585 856213 856212 F 524 0.00 1332 reject_low 42 ALIGNMENT 112 YS2-19m05.q1k chr01 586 718 165827 165959 F 133 96.99 1332 reject_low 37 ALIGNMENT 0 YS2-19m05.q1k chr14 848 719 524932 524931 C 130 0.00 1332 reject_low 23 ALIGNMENT 184 YS2-19m05.q1k vc_3 823 1130 2531 2851 F 308 88.96 1332 reject_low 12 ALIGNMENT 0 YS2-19m05.q1k chr13 719 848 362718 362717 F 130 0.00 1332 reject_low 21 ALIGNMENT 106 YS2-19m05.q1k chr10 718 586 483754 483886 C 133 95.49 1332 reject_low 46 ALIGNMENT 101 YS2-19m05.p1k chr13 206 94 372716 372828 C 113 98.23 1265 reject_low 21 ALIGNMENT 59 YS2-19m05.q1k chr06 709 596 143745 143856 C 114 86.84 1332 reject_low 50 ALIGNMENT 91 YS2-19m05.q1k chr14 718 586 519365 519497 C 133 91.73 1332 reject_low 49 ALIGNMENT 101 YS2-19m05.p1k chr13 206 94 378304 378416 C 113 98.23 1265 reject_low 22 ALIGNMENT 0 YS2-19m05.q1k chr01 719 848 165959 165958 F 130 0.00 1332 reject_low 37 ALIGNMENT 0 YS2-19m05.q1k chr13 719 848 372828 372827 F 130 0.00 1332 reject_low 22 ALIGNMENT 101 YS2-19m05.q1k chr13 606 718 378304 378416 F 113 98.23 1332 reject_low 48 ALIGNMENT 0 YS2-19m05.p1k vc_5 802 92 5026 5025 C 711 0.00 1265 reject_low 6 ALIGNMENT 0 YS2-19m05.q1k chr10 585 62 483887 483886 C 524 0.00 1332 reject_low 46 ALIGNMENT 0 YS2-19m05.q1k vc_3 848 824 2473 2472 C 25 0.00 1332 reject_low 16 ALIGNMENT 110 YS2-19m05.p1k chr16 94 227 560677 560810 F 134 96.27 1265 reject_low 30 ALIGNMENT 0 YS2-19m05.q1k chr07 585 62 541690 541689 C 524 0.00 1332 reject_low 44 ALIGNMENT 91 YS2-19m05.p1k chr14 94 226 519365 519497 F 133 91.73 1265 reject_low 23 ALIGNMENT 94 YS2-19m05.p1k chr14 94 229 524931 525066 F 136 91.91 1265 reject_low 36 ALIGNMENT 0 YS2-19m05.q1k chr05 719 848 449112 449111 F 130 0.00 1332 reject_low 38 ALIGNMENT 0 YS2-19m05.p1k chr14 878 227 102193 102192 C 652 0.00 1265 reject_low 27 ALIGNMENT 0 YS2-19m05.p1k chr14 227 878 519497 519496 F 652 0.00 1265 reject_low 23 ALIGNMENT 0 YS2-19m05.p1k vc_3 802 92 2473 2472 C 711 0.00 1265 reject_low 52 ALIGNMENT 0 YS2-19m05.q1k chr14 585 62 519498 519497 C 524 0.00 1332 reject_low 49 ALIGNMENT 0 YS2-19m05.q1k vc_4 822 62 5813 5812 C 761 0.00 1332 reject_low 9 ALIGNMENT 0 YS2-19m05.q1k chr13 62 583 357002 357001 F 522 0.00 1332 reject_low 20 ALIGNMENT 0 YS2-19m05.q1k vc_4 824 823 5872 6353 F 0 0.00 1332 reject_low 13 ALIGNMENT 230 YS2-19m05.p1k vc_7 803 1148 100 462 F 346 90.46 1265 reject_low 2 ALIGNMENT 0 YS2-19m05.q1k chr06 734 62 143928 143927 C 673 0.00 1332 reject_low 43 ALIGNMENT 59 YS2-19m05.q1k chr06 709 596 138118 138229 C 114 86.84 1332 reject_low 54 ALIGNMENT 26 YS2-19m05.p1k vc_1 833 803 2441 2472 C 31 96.77 1265 reject_low 51 ALIGNMENT 0 YS2-19m05.p1k chr12 878 785 817516 817515 C 94 0.00 1265 accept_chi 0 ALIGNMENT 0 YS2-19m05.q1k vc_4 62 782 5831 5830 F 721 0.00 1332 reject_low 13 ALIGNMENT 36 YS2-19m07.q1k vc_5 492 457 1 36 C 36 100.00 495 reject_low 14 ALIGNMENT 0 YS2-19m07.q1k vc_7 62 457 13525 13524 F 396 0.00 495 reject_low 13 ALIGNMENT 0 YS2-19m07.q1k vc_2 454 62 2146 2145 C 393 0.00 495 reject_low 9 ALIGNMENT 41 YS2-19m07.q1k vc_1 495 455 2472 2512 C 41 100.00 495 reject_low 8 ALIGNMENT 260 YS2-19m07.p1k vc_7 1 444 13918 14366 F 444 87.39 487 reject_vc 7 ALIGNMENT 38 YS2-19m07.q1k vc_7 458 495 13525 13562 F 38 100.00 495 reject_low 13 ALIGNMENT 401 YS2-19m07.q1k chr12 38 455 387008 387425 F 418 99.04 495 accept 0 ALIGNMENT 266 YS2-19m07.p1k vc_5 444 1 4221 4669 C 444 87.84 487 reject_vc 4 ALIGNMENT 0 YS2-19m07.q1k chr12 456 495 387425 387424 F 40 0.00 495 accept 0 ALIGNMENT 0 YS2-19m07.q1k vc_3 454 62 2513 2512 C 393 0.00 495 reject_low 10 ALIGNMENT 0 YS2-19m07.q1k vc_1 454 62 2513 2512 C 393 0.00 495 reject_low 8 ALIGNMENT 39 YS2-19m07.q1k vc_5 495 457 5025 5063 C 39 100.00 495 reject_low 12 ALIGNMENT 266 YS2-19m07.p1k vc_6 1 444 3712 4160 F 444 87.84 487 reject_vc 5 ALIGNMENT 266 YS2-19m07.p1k vc_3 444 1 1301 1749 C 444 87.84 487 reject_vc 3 ALIGNMENT 266 YS2-19m07.p1k vc_1 444 1 1301 1749 C 444 87.84 487 reject_vc 1 ALIGNMENT 266 YS2-19m07.p1k vc_2 444 1 1301 1749 C 444 87.84 487 reject_vc 2 ALIGNMENT 0 YS2-19m07.q1k vc_5 456 62 37 36 C 395 0.00 495 reject_low 14 ALIGNMENT 41 YS2-19m07.q1k vc_4 455 495 5831 5871 F 41 100.00 495 reject_low 11 ALIGNMENT 0 YS2-19m07.q1k vc_4 62 454 5831 5830 F 393 0.00 495 reject_low 11 ALIGNMENT 41 YS2-19m07.q1k vc_2 495 455 2105 2145 C 41 100.00 495 reject_low 9 ALIGNMENT 260 YS2-19m07.p1k vc_7 1 444 456 904 F 444 87.39 487 reject_vc 6 ALIGNMENT 41 YS2-19m07.q1k vc_3 495 455 2472 2512 C 41 100.00 495 reject_low 10 ALIGNMENT 0 YS2-19m07.q1k vc_5 456 62 5064 5063 C 395 0.00 495 reject_low 12 ALIGNMENT 0 YS2-19m09.p1k chr02 849 233 363631 363630 C 617 0.00 1288 reject_low 1 ALIGNMENT 779 YS2-19m09.p1k chr04 1154 32 525501 526628 C 1123 90.92 1288 accept 0 ALIGNMENT 474 YS2-19m09.q1k chr04 96 1071 525098 526074 F 976 84.63 1363 accept 0 ALIGNMENT 72 YS2-19m09.p1k chr02 232 33 363630 363832 C 200 80.50 1288 reject_low 1 ALIGNMENT 0 YS2-19m09.q1k chr04 62 95 525098 525097 F 34 0.00 1363 accept 0 ALIGNMENT 0 YS2-19m11.q1k vc_4 62 218 5831 5830 F 157 0.00 259 reject_low 10 ALIGNMENT 41 YS2-19m11.q1k vc_1 259 219 2472 2512 C 41 100.00 259 reject_low 8 ALIGNMENT 0 YS2-19m11.q1k vc_5 220 62 37 36 C 159 0.00 259 reject_low 13 ALIGNMENT 0 YS2-19m11.q1k vc_7 62 221 13525 13524 F 160 0.00 259 reject_low 12 ALIGNMENT 0 YS2-19m11.q1k chr05 259 219 208407 208406 C 41 0.00 259 accept 0 ALIGNMENT 408 YS2-19m11.p1k vc_6 1 568 3712 4279 F 568 91.73 711 reject_vc 7 ALIGNMENT 412 YS2-19m11.p1k vc_3 651 1 1095 1749 C 651 88.94 711 reject_vc 4 ALIGNMENT 41 YS2-19m11.q1k vc_4 219 259 5831 5871 F 41 100.00 259 reject_low 10 ALIGNMENT 155 YS2-19m11.q1k chr05 218 40 208406 208582 C 179 98.32 259 accept 0 ALIGNMENT 0 YS2-19m11.q1k vc_1 218 62 2513 2512 C 157 0.00 259 reject_low 8 ALIGNMENT 0 YS2-19m11.q1k vc_3 218 62 2513 2512 C 157 0.00 259 reject_low 9 ALIGNMENT 406 YS2-19m11.p1k vc_7 1 651 456 1110 F 651 88.63 711 reject_vc 5 ALIGNMENT 36 YS2-19m11.q1k vc_5 256 221 1 36 C 36 100.00 259 reject_low 13 ALIGNMENT 415 YS2-19m11.p1k vc_5 651 1 4015 4669 C 651 89.09 711 reject_vc 1 ALIGNMENT 39 YS2-19m11.q1k vc_5 259 221 5025 5063 C 39 100.00 259 reject_low 11 ALIGNMENT 412 YS2-19m11.p1k vc_2 651 1 1095 1749 C 651 88.94 711 reject_vc 3 ALIGNMENT 406 YS2-19m11.p1k vc_7 1 651 13918 14572 F 651 88.63 711 reject_vc 6 ALIGNMENT 412 YS2-19m11.p1k vc_1 651 1 1095 1749 C 651 88.94 711 reject_vc 2 ALIGNMENT 38 YS2-19m11.q1k vc_7 222 259 13525 13562 F 38 100.00 259 reject_low 12 ALIGNMENT 0 YS2-19m11.q1k vc_5 220 62 5064 5063 C 159 0.00 259 reject_low 11 ALIGNMENT 41 YS2-19m11.q1k vc_3 259 219 2472 2512 C 41 100.00 259 reject_low 9 ALIGNMENT 452 YS2-19m13.q1k chrm 730 33 22284 22979 C 698 92.98 1359 accept 0 ALIGNMENT 589 YS2-19m14.p1k chr08 30 1004 45827 46796 F 975 87.49 1376 accept 0 ALIGNMENT 921 YS2-19m15.q1k chr14 1187 35 84526 85695 C 1153 94.19 1329 accept 0 ALIGNMENT 1000 YS2-19m15.p1k chr14 30 1203 83908 85086 F 1174 96.25 1274 accept 0 ALIGNMENT 0 YS2-19m17.q1k scplasm1 646 798 756 755 F 153 0.00 1368 accept 0 ALIGNMENT 0 YS2-19m17.q1k scplasm1 608 62 3934 3933 C 547 0.00 1368 reject_low 4 ALIGNMENT 22 YS2-19m17.q1k scplasm1 645 609 3897 3933 C 37 86.49 1368 reject_low 4 ALIGNMENT 566 YS2-19m17.q1k scplasm1 60 1023 3342 4309 F 964 87.86 1368 reject_low 1 ALIGNMENT 0 YS2-19m17.q1k scplasm1 62 608 720 719 F 547 0.00 1368 accept 0 ALIGNMENT 579 YS2-19m17.p1k scplasm1 1089 112 2056 3041 C 978 87.83 1248 accept 0 ALIGNMENT 0 YS2-19m17.p1k scplasm1 111 62 3042 3041 C 50 0.00 1248 accept 0 ALIGNMENT 582 YS2-19m17.q1k scplasm1 1239 428 124 936 C 812 92.00 1368 reject_low 2 ALIGNMENT 22 YS2-19m17.q1k scplasm1 609 645 720 756 F 37 86.49 1368 accept 0 ALIGNMENT 0 YS2-19m17.q1k vc_6 840 62 6536 6535 C 779 0.00 1368 reject_low 3 ALIGNMENT 217 YS2-19m17.q1k vc_6 1239 841 6135 6535 C 399 87.22 1368 reject_low 3 ALIGNMENT 0 YS2-19m17.q1k scplasm1 798 646 3898 3897 C 153 0.00 1368 reject_low 4 ALIGNMENT 0 YS2-19m17.q1k scplasm1 427 62 937 936 C 366 0.00 1368 reject_low 2 ALIGNMENT 926 YS2-19m18.p1k chr07 35 1095 498803 499869 F 1061 96.14 1269 accept 0 ALIGNMENT 891 YS2-19m18.q1k chr07 1105 52 502902 503963 C 1054 95.26 1390 accept 0 ALIGNMENT 132 YS2-19m20.q1k chr12 325 513 712540 712728 F 189 88.36 1018 reject_low 2 ALIGNMENT 1051 YS2-19m20.p1k chr04 1220 34 676178 677361 C 1187 96.63 1304 accept_chi 0 ALIGNMENT 425 YS2-19m20.q1k chr15 94 763 677957 678637 F 670 88.96 1018 accept_chi 1 ALIGNMENT 0 YS2-19m20.q1k chr12 122 324 712540 712539 F 203 0.00 1018 reject_low 2 ALIGNMENT 990 YS2-19m21.p1k chr15 33 1184 640710 641867 F 1152 96.44 1211 accept 0 ALIGNMENT 900 YS2-19m21.q1k chr15 1095 45 643882 644935 C 1051 96.38 1295 accept 0 ALIGNMENT 285 YS2-19m22.q1k vc_1 1 298 2689 2985 F 298 98.99 646 reject_vc 4 ALIGNMENT 0 YS2-19m22.p1k chr07 505 522 933291 933290 F 18 0.00 522 accept 0 ALIGNMENT 0 YS2-19m22.q1k vc_7 53 54 5172 6360 C 0 0.00 646 reject_vc 8 ALIGNMENT 448 YS2-19m22.p1k chr07 37 504 932824 933291 F 468 99.79 522 accept 0 ALIGNMENT 431 YS2-19m22.q1k vc_5 1 602 2556 3172 F 602 91.36 646 reject_vc 1 ALIGNMENT 51 YS2-19m22.q1k vc_7 54 3 6360 6411 C 52 100.00 646|1,0 reject_vc 8 ALIGNMENT 0 YS2-19m22.q1k vc_4 305 307 1615 1878 F 3 0.00 646 reject_vc 7 ALIGNMENT 78 YS2-19m22.q1k vc_7 413 305 4591 4699 C 109 89.91 646 reject_vc 8 ALIGNMENT 0 YS2-19m22.q1k vc_4 237 62 6340 6339 C 176 0.00 646 reject_low 10 ALIGNMENT 55 YS2-19m22.q1k vc_4 304 238 46 112 C 67 95.52 646 reject_low 9 ALIGNMENT 0 YS2-19m22.q1k vc_4 237 62 113 112 C 176 0.00 646 reject_low 9 ALIGNMENT 0 YS2-19m22.q1k vc_7 304 304 4700 4921 C 1 0.00 646 reject_vc 8 ALIGNMENT 55 YS2-19m22.q1k vc_4 238 304 1548 1614 F 67 95.52 646 reject_vc 7 ALIGNMENT 231 YS2-19m22.q1k vc_7 303 53 4922 5172 C 251 97.21 646|0,1 reject_vc 8 ALIGNMENT 359 YS2-19m22.q1k vc_4 413 1 5240 5654 C 413 95.64 646 reject_vc 3 ALIGNMENT 140 YS2-19m22.q1k vc_4 308 602 1879 2188 F 295 84.07 646 reject_vc 7 ALIGNMENT 55 YS2-19m22.q1k vc_4 304 238 6273 6339 C 67 95.52 646 reject_low 10 ALIGNMENT 0 YS2-19m22.q1k vc_4 62 237 1548 1547 F 176 0.00 646 reject_vc 7 ALIGNMENT 285 YS2-19m22.q1k vc_2 1 298 2322 2618 F 298 98.99 646 reject_vc 5 ALIGNMENT 428 YS2-19m22.q1k vc_7 548 1 2015 2569 C 548 93.07 646 reject_vc 2 ALIGNMENT 285 YS2-19m22.q1k vc_3 1 298 2689 2985 F 298 98.99 646 reject_vc 6 ALIGNMENT 917 YS2-19m23.q1k chr10 1264 124 728866 730008 C 1141 94.39 1297 accept_tel 0 ALIGNMENT 898 YS2-19m23.q1k chr04 124 1264 15707 16849 F 1141 93.95 1297 reject_low 1 ALIGNMENT 0 YS2-19m23.q1k chr14 62 221 14433 14432 F 160 0.00 1297 reject_low 3 ALIGNMENT 0 YS2-19m23.q1k chr06 62 221 12530 12529 F 160 0.00 1297 reject_low 2 ALIGNMENT 922 YS2-19m23.p1k chr10 35 1151 728520 729637 F 1117 94.99 1213 accept_tel 0 ALIGNMENT 761 YS2-19m23.q1k chr06 222 1264 12530 13574 F 1043 92.14 1297 reject_low 2 ALIGNMENT 940 YS2-19m23.p1k chr14 1151 35 14706 15823 C 1117 95.52 1213 reject_low 3 ALIGNMENT 0 YS2-19m23.q1k chr04 62 123 15707 15706 F 62 0.00 1297 reject_low 1 ALIGNMENT 754 YS2-19m23.q1k chr14 222 1264 14433 15477 F 1043 91.95 1297 reject_low 3 ALIGNMENT 901 YS2-19m23.p1k chr04 1151 35 16078 17195 C 1117 94.36 1213 reject_low 1 ALIGNMENT 955 YS2-19m23.p1k chr06 1151 35 12803 13920 C 1117 95.97 1213 reject_low 2 ALIGNMENT 0 YS2-19m23.q1k chr10 123 62 730009 730008 C 62 0.00 1297 accept_tel 0 ALIGNMENT 0 YS2-19m24.q1k vc_1 260 62 2512 2511 C 199 0.00 300 reject_low 8 ALIGNMENT 0 YS2-19m24.q1k vc_3 260 62 2512 2511 C 199 0.00 300 reject_low 10 ALIGNMENT 0 YS2-19m24.q1k chr12 261 300 42533 42532 F 40 0.00 300 accept 0 ALIGNMENT 362 YS2-19m24.p1k vc_3 573 1 1194 1749 C 573 89.88 640 reject_vc 5 ALIGNMENT 213 YS2-19m24.q1k chr12 37 260 42310 42533 F 224 99.55 300 accept 0 ALIGNMENT 0 YS2-19m24.q1k vc_2 260 62 2145 2144 C 199 0.00 300 reject_low 9 ALIGNMENT 40 YS2-19m24.q1k vc_2 300 261 2105 2144 C 40 100.00 300 reject_low 9 ALIGNMENT 365 YS2-19m24.p1k vc_5 573 1 4114 4669 C 573 90.05 640 reject_vc 1 ALIGNMENT 362 YS2-19m24.p1k vc_1 573 1 1194 1749 C 573 89.88 640 reject_vc 3 ALIGNMENT 0 YS2-19m24.q1k vc_5 261 62 5064 5063 C 200 0.00 300 reject_low 12 ALIGNMENT 362 YS2-19m24.p1k vc_2 573 1 1194 1749 C 573 89.88 640 reject_vc 4 ALIGNMENT 40 YS2-19m24.q1k vc_1 300 261 2472 2511 C 40 100.00 300 reject_low 8 ALIGNMENT 36 YS2-19m24.q1k vc_5 297 262 1 36 C 36 100.00 300 reject_low 14 ALIGNMENT 356 YS2-19m24.p1k vc_7 1 573 13918 14473 F 573 89.53 640 reject_vc 7 ALIGNMENT 40 YS2-19m24.q1k vc_3 300 261 2472 2511 C 40 100.00 300 reject_low 10 ALIGNMENT 0 YS2-19m24.q1k vc_4 62 260 5832 5831 F 199 0.00 300 reject_low 11 ALIGNMENT 365 YS2-19m24.p1k vc_6 1 573 3712 4267 F 573 90.05 640 reject_vc 2 ALIGNMENT 0 YS2-19m24.q1k vc_5 261 62 37 36 C 200 0.00 300 reject_low 14 ALIGNMENT 38 YS2-19m24.q1k vc_7 263 300 13525 13562 F 38 100.00 300 reject_low 13 ALIGNMENT 40 YS2-19m24.q1k vc_4 261 300 5832 5871 F 40 100.00 300 reject_low 11 ALIGNMENT 356 YS2-19m24.p1k vc_7 1 573 456 1011 F 573 89.53 640 reject_vc 6 ALIGNMENT 39 YS2-19m24.q1k vc_5 300 262 5025 5063 C 39 100.00 300 reject_low 12 ALIGNMENT 0 YS2-19m24.q1k vc_7 62 262 13525 13524 F 201 0.00 300 reject_low 13 ALIGNMENT 675 YS2-19n01.q1k chr11 41 731 319554 320244 F 691 100.00 732 accept 0 ALIGNMENT 667 YS2-19n02.q1k chr10 1187 31 52471 53615 C 1157 87.73 1468 accept 0 ALIGNMENT 0 YS2-19n03.q1k chr07 62 642 9581 9580 F 581 0.00 1415 reject_low 1 ALIGNMENT 128 YS2-19n03.q1k chr07 643 961 9581 9895 F 319 81.19 1415 reject_low 1 ALIGNMENT 895 YS2-19n03.p1k chr09 33 1131 426233 427339 F 1099 95.54 1265 accept 0 ALIGNMENT 1075 YS2-19n03.q1k chr09 1224 43 430212 431401 C 1182 97.46 1415 accept 0 ALIGNMENT 874 YS2-19n04.q1k chr10 1089 31 52540 53615 C 1059 95.94 1342 accept 0 ALIGNMENT 1012 YS2-19n04.p1k chr10 35 1209 49230 50421 F 1175 96.51 1284 accept 0 ALIGNMENT 0 YS2-19n06.p1k chr10 217 844 378355 378354 F 628 0.00 1282 reject_low 11 ALIGNMENT 0 YS2-19n06.p1k chr07 135 62 412372 412371 C 74 0.00 1282 reject_low 12 ALIGNMENT 82 YS2-19n06.p1k chr13 216 119 372438 372536 C 98 94.90 1282 reject_low 1 ALIGNMENT 82 YS2-19n06.p1k chr13 221 136 586623 586709 C 86 98.84 1282 reject_low 2 ALIGNMENT 79 YS2-19n06.p1k chr12 216 137 687855 687934 C 80 100.00 1282 reject_low 7 ALIGNMENT 0 YS2-19n06.p1k chr07 844 211 412298 412297 C 634 0.00 1282 reject_low 12 ALIGNMENT 0 YS2-19n06.p1k chr07 844 217 73823 73822 C 628 0.00 1282 reject_low 3 ALIGNMENT 862 YS2-19n06.q1k chr07 1023 40 826922 827920 C 984 97.26 1334 accept 0 ALIGNMENT 76 YS2-19n06.p1k chr05 137 216 438696 438775 F 80 98.75 1282 reject_low 10 ALIGNMENT 0 YS2-19n06.p1k chr05 62 136 438696 438695 F 75 0.00 1282 reject_low 10 ALIGNMENT 0 YS2-19n06.p1k chr12 136 62 687935 687934 C 75 0.00 1282 reject_low 7 ALIGNMENT 0 YS2-19n06.p1k chr05 217 844 469531 469530 F 628 0.00 1282 reject_low 6 ALIGNMENT 0 YS2-19n06.p1k chr13 844 216 420583 420582 C 629 0.00 1282 reject_low 8 ALIGNMENT 76 YS2-19n06.p1k chr10 137 216 378276 378355 F 80 98.75 1282 reject_low 11 ALIGNMENT 0 YS2-19n06.p1k chr07 133 62 73905 73904 C 72 0.00 1282 reject_low 3 ALIGNMENT 0 YS2-19n06.p1k chr11 844 217 307784 307783 C 628 0.00 1282 reject_low 4 ALIGNMENT 0 YS2-19n06.p1k chr10 62 136 378276 378275 F 75 0.00 1282 reject_low 11 ALIGNMENT 79 YS2-19n06.p1k chr13 215 137 420582 420660 C 79 100.00 1282 reject_low 8 ALIGNMENT 0 YS2-19n06.p1k chr05 62 135 469451 469450 F 74 0.00 1282 reject_low 6 ALIGNMENT 0 YS2-19n06.p1k chr15 844 216 663808 663807 C 629 0.00 1282 reject_low 5 ALIGNMENT 0 YS2-19n06.p1k chr13 118 62 372537 372536 C 57 0.00 1282 reject_low 1 ALIGNMENT 79 YS2-19n06.p1k chr11 216 134 307783 307865 C 83 98.80 1282 reject_low 4 ALIGNMENT 77 YS2-19n06.p1k chr08 216 136 85288 85368 C 81 98.77 1282 reject_low 9 ALIGNMENT 80 YS2-19n06.p1k chr05 136 216 469451 469531 F 81 100.00 1282 reject_low 6 ALIGNMENT 0 YS2-19n06.p1k chr13 844 217 372439 372438 C 628 0.00 1282 reject_low 1 ALIGNMENT 0 YS2-19n06.p1k chr13 844 222 586624 586623 C 623 0.00 1282 reject_low 2 ALIGNMENT 0 YS2-19n06.p1k chr05 217 844 438775 438774 F 628 0.00 1282 reject_low 10 ALIGNMENT 75 YS2-19n06.p1k chr07 210 136 412297 412371 C 75 100.00 1282 reject_low 12 ALIGNMENT 0 YS2-19n06.p1k chr11 211 844 379396 379395 F 634 0.00 1282 reject_low 13 ALIGNMENT 0 YS2-19n06.p1k chr12 844 217 687856 687855 C 628 0.00 1282 reject_low 7 ALIGNMENT 0 YS2-19n06.p1k chr08 844 217 85289 85288 C 628 0.00 1282 reject_low 9 ALIGNMENT 0 YS2-19n06.p1k chr08 135 62 85369 85368 C 74 0.00 1282 reject_low 9 ALIGNMENT 0 YS2-19n06.p1k chr13 136 62 420661 420660 C 75 0.00 1282 reject_low 8 ALIGNMENT 0 YS2-19n06.p1k chr11 133 62 307866 307865 C 72 0.00 1282 reject_low 4 ALIGNMENT 79 YS2-19n06.p1k chr07 216 134 73822 73904 C 83 98.80 1282 reject_low 3 ALIGNMENT 886 YS2-19n06.p1k chr07 36 1070 823386 824437 F 1035 96.23 1282 accept 0 ALIGNMENT 79 YS2-19n06.p1k chr15 215 134 663807 663888 C 82 98.78 1282 reject_low 5 ALIGNMENT 0 YS2-19n06.p1k chr15 133 62 663889 663888 C 72 0.00 1282 reject_low 5 ALIGNMENT 0 YS2-19n06.p1k chr11 62 136 379323 379322 F 75 0.00 1282 reject_low 13 ALIGNMENT 74 YS2-19n06.p1k chr11 137 210 379323 379396 F 74 100.00 1282 reject_low 13 ALIGNMENT 0 YS2-19n06.p1k chr13 135 62 586710 586709 C 74 0.00 1282 reject_low 2 ALIGNMENT 0 YS2-19n08.q1k chr04 457 837 1280511 1280510 F 381 0.00 1383 reject_low 1 ALIGNMENT 782 YS2-19n08.p1k chr15 1239 36 623640 624837 C 1204 89.78 1373 accept 0 ALIGNMENT 934 YS2-19n08.q1k chr15 41 1195 620714 621874 F 1155 94.89 1383 accept 0 ALIGNMENT 92 YS2-19n08.q1k chr04 107 456 1280164 1280511 F 350 76.00 1383 reject_low 1 ALIGNMENT 41 YS2-19n11.q1k vc_3 425 385 2472 2512 C 41 100.00 425 reject_low 4 ALIGNMENT 341 YS2-19n11.q1k chr04 385 40 1279119 1279464 C 346 100.00 425 accept_chi 0 ALIGNMENT 319 YS2-19n11.p1k chr04 31 375 1279119 1279464 F 345 97.97 393 accept_chi 1 ALIGNMENT 41 YS2-19n11.q1k vc_1 425 385 2472 2512 C 41 100.00 425 reject_low 2 ALIGNMENT 0 YS2-19n11.q1k vc_3 384 62 2513 2512 C 323 0.00 425 reject_low 4 ALIGNMENT 38 YS2-19n11.q1k vc_7 388 425 13525 13562 F 38 100.00 425 reject_low 6 ALIGNMENT 41 YS2-19n11.q1k vc_2 425 385 2105 2145 C 41 100.00 425 reject_low 3 ALIGNMENT 0 YS2-19n11.p1k chr04 376 393 1279464 1279463 F 18 0.00 393 accept_chi 1 ALIGNMENT 0 YS2-19n11.q1k vc_1 384 62 2513 2512 C 323 0.00 425 reject_low 2 ALIGNMENT 41 YS2-19n11.q1k vc_4 385 425 5831 5871 F 41 100.00 425 reject_low 5 ALIGNMENT 0 YS2-19n11.q1k chr04 425 386 1279120 1279119 C 40 0.00 425 accept_chi 0 ALIGNMENT 0 YS2-19n11.q1k vc_2 384 62 2146 2145 C 323 0.00 425 reject_low 3 ALIGNMENT 0 YS2-19n11.q1k vc_4 62 384 5831 5830 F 323 0.00 425 reject_low 5 ALIGNMENT 0 YS2-19n11.q1k vc_7 62 387 13525 13524 F 326 0.00 425 reject_low 6 ALIGNMENT 61 YS2-19n12.q1k vc_4 304 238 6273 6339 C 67 98.51 1100 reject_low 14 ALIGNMENT 0 YS2-19n12.q1k vc_4 62 237 1548 1547 F 176 0.00 1100 reject_vc 2 ALIGNMENT 0 YS2-19n12.q1k vc_4 237 62 6340 6339 C 176 0.00 1100 reject_low 14 ALIGNMENT 0 YS2-19n12.q1k vc_1 304 384 2991 2990 F 81 0.00 1100 reject_low 9 ALIGNMENT 0 YS2-19n12.q1k vc_3 304 384 2991 2990 F 81 0.00 1100 reject_low 11 ALIGNMENT 293 YS2-19n12.q1k vc_1 1 303 2689 2991 F 303 99.01 1100 reject_low 9 ALIGNMENT 61 YS2-19n12.q1k vc_4 304 238 46 112 C 67 98.51 1100 reject_low 13 ALIGNMENT 51 YS2-19n12.q1k vc_7 54 3 6360 6411 C 52 100.00 1100|1,0 reject_low 12 ALIGNMENT 0 YS2-19n12.q1k vc_4 237 62 113 112 C 176 0.00 1100 reject_low 13 ALIGNMENT 61 YS2-19n12.q1k vc_4 238 304 1548 1614 F 67 98.51 1100 reject_vc 2 ALIGNMENT 0 YS2-19n12.q1k vc_4 384 305 6274 6273 C 80 0.00 1100 reject_low 14 ALIGNMENT 0 YS2-19n12.q1k vc_4 384 305 47 46 C 80 0.00 1100 reject_low 13 ALIGNMENT 110 YS2-19n12.q1k vc_7 421 307 4583 4697 C 115 99.13 1100 reject_low 12 ALIGNMENT 293 YS2-19n12.q1k vc_3 1 303 2689 2991 F 303 99.01 1100 reject_low 11 ALIGNMENT 293 YS2-19n12.q1k vc_2 1 303 2322 2624 F 303 99.01 1100 reject_low 10 ALIGNMENT 0 YS2-19n12.q1k vc_7 306 304 4698 4921 C 3 0.00 1100 reject_low 12 ALIGNMENT 617 YS2-19n12.q1k vc_5 1 816 2556 3376 F 816 92.40 1100 reject_vc 0 ALIGNMENT 141 YS2-19n12.p1k vc_2 408 1 1471 1875 C 408 78.92 949 reject_vc 5 ALIGNMENT 141 YS2-19n12.p1k vc_1 408 1 1471 1875 C 408 78.92 949 reject_vc 4 ALIGNMENT 0 YS2-19n12.q1k vc_4 305 307 1615 1878 F 3 0.00 1100 reject_vc 2 ALIGNMENT 616 YS2-19n12.q1k vc_7 742 1 1827 2569 C 742 94.88 1100 reject_vc 1 ALIGNMENT 141 YS2-19n12.p1k vc_6 1 408 3586 3990 F 408 78.92 949 reject_vc 7 ALIGNMENT 0 YS2-19n12.q1k vc_7 53 54 5172 6360 C 0 0.00 1100 reject_low 12 ALIGNMENT 141 YS2-19n12.p1k vc_3 408 1 1471 1875 C 408 78.92 949 reject_vc 6 ALIGNMENT 239 YS2-19n12.q1k vc_7 303 53 4922 5172 C 251 98.41 1100|0,1 reject_low 12 ALIGNMENT 0 YS2-19n12.q1k vc_2 304 384 2624 2623 F 81 0.00 1100 reject_low 10 ALIGNMENT 398 YS2-19n12.q1k vc_4 421 1 5232 5654 C 421 98.34 1100 reject_vc 3 ALIGNMENT 318 YS2-19n12.q1k vc_4 308 816 1879 2392 F 509 88.41 1100 reject_vc 2 ALIGNMENT 138 YS2-19n12.p1k vc_7 1 408 13792 14196 F 408 78.68 949 reject_vc 8 ALIGNMENT 263 YS2-19n14.p1k chr06 437 1082 33402 34051 F 646 80.96 1306 reject_low 1 ALIGNMENT 992 YS2-19n14.p1k chr15 1228 38 76041 77246 C 1191 95.55 1306 accept 0 ALIGNMENT 0 YS2-19n14.p1k chr06 62 436 33402 33401 F 375 0.00 1306 reject_low 1 ALIGNMENT 927 YS2-19n14.q1k chr15 40 1074 75759 76805 F 1035 97.29 1353 accept 0 ALIGNMENT 479 YS2-19n14.q1k chr06 1005 42 33523 34489 C 964 84.34 1353 reject_low 1 ALIGNMENT 0 YS2-19n16.q1k chr05 743 896 276150 276149 F 154 0.00 1399 reject_low 2 ALIGNMENT 483 YS2-19n16.q1k chr05 42 739 277461 278158 F 698 90.40 1399 reject_low 1 ALIGNMENT 142 YS2-19n16.q1k chr05 305 742 275713 276150 F 438 78.08 1399 reject_low 2 ALIGNMENT 967 YS2-19n16.q1k chr05 1206 41 266037 267213 C 1166 94.25 1399 accept 0 ALIGNMENT 0 YS2-19n16.q1k chr05 62 304 275713 275712 F 243 0.00 1399 reject_low 2 ALIGNMENT 966 YS2-19n16.p1k chr05 31 1127 262465 263564 F 1097 97.27 1298 accept 0 ALIGNMENT 0 YS2-19n16.q1k chr05 740 896 278158 278157 F 157 0.00 1399 reject_low 1 ALIGNMENT 963 YS2-19n18.q1k chr12 1124 30 140908 142008 C 1095 97.35 1396 accept 0 ALIGNMENT 958 YS2-19n18.p1k chr12 37 1086 136511 137571 F 1050 98.00 1284 accept 0 ALIGNMENT 1001 YS2-19n19.p1k chr11 31 1204 437809 438990 F 1174 95.66 1290 accept 0 ALIGNMENT 912 YS2-19n19.q1k chr11 1143 35 438876 439991 C 1109 95.31 1365 accept 0 ALIGNMENT 938 YS2-19n20.p1k chr07 30 1170 781055 782208 F 1141 95.62 1278 accept 0 ALIGNMENT 960 YS2-19n20.q1k chr07 1100 25 781830 782918 C 1076 97.30 1317 accept 0 ALIGNMENT 1027 YS2-19n23.p1k chr04 34 1215 924786 925962 F 1182 96.45 1263 accept 0 ALIGNMENT 930 YS2-19n23.q1k chr04 1212 41 928880 930037 C 1172 94.97 1418 accept 0 ALIGNMENT 0 YS2-19n24.q1k chr04 880 164 115495 115494 C 717 0.00 1325 reject_low 1 ALIGNMENT 115 YS2-19n24.q1k chr04 163 32 115494 115627 C 132 96.97 1325 reject_low 1 ALIGNMENT 875 YS2-19n24.q1k chr11 164 1204 610758 611806 F 1041 95.29 1325 accept 0 ALIGNMENT 0 YS2-19n24.q1k chr11 62 163 610758 610757 F 102 0.00 1325 accept 0 ALIGNMENT 256 YS2-19n24.p1k chr11 323 37 613426 613708 C 287 97.91 1293 accept 0 ALIGNMENT 0 YS2-19o02.p1k vc_7 876 854 2728 2727 C 23 0.00 1219 reject_low 13 ALIGNMENT 21 YS2-19o02.p1k vc_3 833 853 2511 2531 F 21 100.00 1219 reject_low 11 ALIGNMENT 236 YS2-19o02.p1k vc_3 1219 853 1737 2105 C 367 88.56 1219 reject_low 4 ALIGNMENT 0 YS2-19o02.p1k vc_7 62 852 100 99 F 791 0.00 1219 reject_low 6 ALIGNMENT 0 YS2-19o02.p1k vc_2 854 876 2164 2163 F 23 0.00 1219 reject_low 10 ALIGNMENT 21 YS2-19o02.p1k vc_2 833 853 2144 2164 F 21 100.00 1219 reject_low 10 ALIGNMENT 236 YS2-19o02.p1k vc_5 1219 853 4657 5025 C 367 88.56 1219 reject_low 5 ALIGNMENT 0 YS2-19o02.p1k vc_3 62 832 2511 2510 F 771 0.00 1219 reject_low 11 ALIGNMENT 0 YS2-19o02.p1k chr16 876 835 634505 634504 C 42 0.00 1219 accept_chi 0 ALIGNMENT 21 YS2-19o02.p1k vc_1 833 853 2511 2531 F 21 100.00 1219 reject_low 9 ALIGNMENT 26 YS2-19o02.p1k vc_3 883 853 2441 2472 C 31 96.77 1219 reject_low 16 ALIGNMENT 21 YS2-19o02.p1k vc_4 853 833 5812 5832 C 21 100.00 1219 reject_low 12 ALIGNMENT 0 YS2-19o02.p1k vc_5 62 833 2379 2378 F 772 0.00 1219 reject_low 14 ALIGNMENT 236 YS2-19o02.p1k vc_2 1219 853 1737 2105 C 367 88.56 1219 reject_low 3 ALIGNMENT 0 YS2-19o02.p1k vc_1 852 62 2106 2105 C 791 0.00 1219 reject_low 2 ALIGNMENT 234 YS2-19o02.p1k vc_4 853 1199 5871 6219 F 347 89.63 1219 reject_low 8 ALIGNMENT 0 YS2-19o02.p1k vc_3 852 62 2473 2472 C 791 0.00 1219 reject_low 16 ALIGNMENT 20 YS2-19o02.p1k vc_5 834 853 2379 2398 F 20 100.00 1219 reject_low 14 ALIGNMENT 236 YS2-19o02.p1k vc_7 853 1219 13562 13930 F 367 88.56 1219 reject_low 7 ALIGNMENT 0 YS2-19o02.p1k vc_2 62 832 2144 2143 F 771 0.00 1219 reject_low 10 ALIGNMENT 0 YS2-19o02.p1k vc_2 852 62 2106 2105 C 791 0.00 1219 reject_low 3 ALIGNMENT 0 YS2-19o02.p1k vc_5 852 62 5026 5025 C 791 0.00 1219 reject_low 5 ALIGNMENT 778 YS2-19o02.p1k chr16 834 34 634504 635304 C 801 100.00 1219 accept_chi 0 ALIGNMENT 236 YS2-19o02.p1k vc_1 1219 853 1737 2105 C 367 88.56 1219 reject_low 2 ALIGNMENT 0 YS2-19o02.p1k vc_3 852 62 2106 2105 C 791 0.00 1219 reject_low 4 ALIGNMENT 0 YS2-19o02.p1k vc_4 876 854 5813 5812 C 23 0.00 1219 reject_low 12 ALIGNMENT 0 YS2-19o02.p1k vc_7 62 852 13562 13561 F 791 0.00 1219 reject_low 7 ALIGNMENT 0 YS2-19o02.p1k vc_1 852 62 2473 2472 C 791 0.00 1219 reject_low 15 ALIGNMENT 0 YS2-19o02.p1k vc_4 62 852 5871 5870 F 791 0.00 1219 reject_low 8 ALIGNMENT 0 YS2-19o02.p1k vc_3 854 876 2531 2530 F 23 0.00 1219 reject_low 11 ALIGNMENT 26 YS2-19o02.p1k vc_1 883 853 2441 2472 C 31 96.77 1219 reject_low 15 ALIGNMENT 21 YS2-19o02.p1k vc_7 853 833 2727 2747 C 21 100.00 1219 reject_low 13 ALIGNMENT 0 YS2-19o02.p1k vc_7 832 62 2748 2747 C 771 0.00 1219 reject_low 13 ALIGNMENT 0 YS2-19o02.p1k vc_4 832 62 5833 5832 C 771 0.00 1219 reject_low 12 ALIGNMENT 0 YS2-19o02.p1k vc_1 62 832 2511 2510 F 771 0.00 1219 reject_low 9 ALIGNMENT 236 YS2-19o02.p1k vc_7 853 1219 100 468 F 367 88.56 1219 reject_low 6 ALIGNMENT 0 YS2-19o02.p1k vc_1 854 876 2531 2530 F 23 0.00 1219 reject_low 9 ALIGNMENT 705 YS2-19o02.q1k chr16 75 1164 916549 917651 F 1090 89.27 1400 accept_chi 1 ALIGNMENT 0 YS2-19o02.p1k vc_5 854 876 2398 2397 F 23 0.00 1219 reject_low 14 ALIGNMENT 953 YS2-19o04.p1k chr16 1099 30 920085 921172 C 1070 97.48 1211 accept 0 ALIGNMENT 901 YS2-19o04.q1k chr16 43 1083 916507 917565 F 1041 96.93 1375 accept 0 ALIGNMENT 1028 YS2-19o07.q1k chr10 42 1187 317916 319073 F 1146 97.56 1342 accept 0 ALIGNMENT 979 YS2-19o07.p1k chr10 1221 32 321643 322845 C 1190 95.80 1254 accept 0 ALIGNMENT 833 YS2-19o08.q1k chr10 40 993 289875 290845 F 954 96.65 1360 accept 0 ALIGNMENT 512 YS2-19o08.p1k chr10 664 28 293008 293655 C 637 94.03 1265 accept 0 ALIGNMENT 241 YS2-19o08.p1k chr10 1139 711 292620 293057 C 429 88.11 1265 reject_low 1 ALIGNMENT 0 YS2-19o08.p1k chr10 870 665 293009 293008 C 206 0.00 1265 accept 0 ALIGNMENT 0 YS2-19o08.p1k chr10 710 62 293058 293057 C 649 0.00 1265 reject_low 1 ALIGNMENT 1039 YS2-19o09.q1k chr14 40 1261 106117 107341 F 1222 95.99 1386 accept 0 ALIGNMENT 904 YS2-19o09.p1k chr14 1040 38 110789 111804 C 1003 97.41 1221 accept 0 ALIGNMENT 0 YS2-19o12.q1k chr14 298 337 639511 639510 F 40 0.00 337 accept_chi 1 ALIGNMENT 42 YS2-19o12.q1k vc_1 337 296 2472 2513 C 42 100.00 337 reject_low 2 ALIGNMENT 42 YS2-19o12.q1k vc_4 296 337 5830 5871 F 42 100.00 337 reject_low 4 ALIGNMENT 259 YS2-19o12.p1k chr14 301 32 639241 639511 C 270 99.63 319 accept_chi 0 ALIGNMENT 0 YS2-19o12.q1k vc_5 298 62 37 36 C 237 0.00 337 reject_low 7 ALIGNMENT 259 YS2-19o12.q1k chr14 28 297 639241 639511 F 270 99.63 337 accept_chi 1 ALIGNMENT 42 YS2-19o12.q1k vc_3 337 296 2472 2513 C 42 100.00 337 reject_low 3 ALIGNMENT 0 YS2-19o12.q1k vc_4 62 295 5830 5829 F 234 0.00 337 reject_low 4 ALIGNMENT 0 YS2-19o12.q1k vc_1 295 62 2514 2513 C 234 0.00 337 reject_low 2 ALIGNMENT 38 YS2-19o12.q1k vc_7 300 337 13525 13562 F 38 100.00 337 reject_low 6 ALIGNMENT 39 YS2-19o12.q1k vc_5 337 299 5025 5063 C 39 100.00 337 reject_low 5 ALIGNMENT 0 YS2-19o12.p1k chr14 319 302 639242 639241 C 18 0.00 319 accept_chi 0 ALIGNMENT 0 YS2-19o12.q1k vc_7 62 299 13525 13524 F 238 0.00 337 reject_low 6 ALIGNMENT 0 YS2-19o12.q1k vc_5 298 62 5064 5063 C 237 0.00 337 reject_low 5 ALIGNMENT 36 YS2-19o12.q1k vc_5 334 299 1 36 C 36 100.00 337 reject_low 7 ALIGNMENT 0 YS2-19o12.q1k vc_3 295 62 2514 2513 C 234 0.00 337 reject_low 3 ALIGNMENT 38 YS2-19o14.q1k vc_7 352 389 13525 13562 F 38 100.00 389 reject_low 7 ALIGNMENT 41 YS2-19o14.q1k vc_1 389 349 2472 2512 C 41 100.00 389 reject_low 2 ALIGNMENT 41 YS2-19o14.q1k vc_4 349 389 5831 5871 F 41 100.00 389 reject_low 5 ALIGNMENT 0 YS2-19o14.q1k vc_7 62 351 13525 13524 F 290 0.00 389 reject_low 7 ALIGNMENT 0 YS2-19o14.q1k chr02 389 349 804593 804592 C 41 0.00 389 ambiguous_tel 0 ALIGNMENT 39 YS2-19o14.q1k vc_5 389 351 5025 5063 C 39 100.00 389 reject_low 6 ALIGNMENT 0 YS2-19o14.q1k vc_2 348 62 2146 2145 C 287 0.00 389 reject_low 3 ALIGNMENT 300 YS2-19o14.q1k chr02 348 42 804592 804898 C 307 99.67 389 ambiguous_tel 0 ALIGNMENT 0 YS2-19o14.q1k vc_3 348 62 2513 2512 C 287 0.00 389 reject_low 4 ALIGNMENT 0 YS2-19o14.q1k vc_5 350 62 5064 5063 C 289 0.00 389 reject_low 6 ALIGNMENT 0 YS2-19o14.p1k chr02 333 351 804898 804897 F 19 0.00 351 ambiguous_tel 1 ALIGNMENT 290 YS2-19o14.p1k chr02 28 332 804592 804898 F 305 99.02 351 ambiguous_tel 1 ALIGNMENT 36 YS2-19o14.q1k vc_5 386 351 1 36 C 36 100.00 389 reject_low 8 ALIGNMENT 41 YS2-19o14.q1k vc_3 389 349 2472 2512 C 41 100.00 389 reject_low 4 ALIGNMENT 0 YS2-19o14.q1k vc_4 62 348 5831 5830 F 287 0.00 389 reject_low 5 ALIGNMENT 0 YS2-19o14.q1k vc_1 348 62 2513 2512 C 287 0.00 389 reject_low 2 ALIGNMENT 0 YS2-19o14.q1k vc_5 350 62 37 36 C 289 0.00 389 reject_low 8 ALIGNMENT 41 YS2-19o14.q1k vc_2 389 349 2105 2145 C 41 100.00 389 reject_low 3 ALIGNMENT 119 YS2-19o15.q1k chr12 843 725 485696 485814 C 119 100.00 1357 reject_low 6 ALIGNMENT 322 YS2-19o15.p1k chr07 38 386 336806 337156 F 349 98.85 1241 reject_low 2 ALIGNMENT 0 YS2-19o15.q1k chr12 724 62 472583 472582 C 663 0.00 1357 reject_low 4 ALIGNMENT 0 YS2-19o15.p1k chr12 102 385 465384 465383 F 284 0.00 1241 reject_low 1 ALIGNMENT 785 YS2-19o15.q1k chr12 1212 51 459291 460501 C 1162 91.39 1357 accept 0 ALIGNMENT 119 YS2-19o15.q1k chr12 843 725 482044 482162 C 119 100.00 1357 reject_low 5 ALIGNMENT 719 YS2-19o15.p1k chr12 386 1228 456247 457101 F 843 95.97 1241 accept 0 ALIGNMENT 0 YS2-19o15.q1k chr12 724 62 485815 485814 C 663 0.00 1357 reject_low 6 ALIGNMENT 312 YS2-19o15.q1k chr12 1212 725 468428 468930 C 488 89.75 1357 reject_low 1 ALIGNMENT 128 YS2-19o15.q1k chr12 843 710 489348 489481 C 134 98.51 1357 reject_low 3 ALIGNMENT 0 YS2-19o15.p1k chr12 102 385 456247 456246 F 284 0.00 1241 accept 0 ALIGNMENT 0 YS2-19o15.q1k chr12 724 62 482163 482162 C 663 0.00 1357 reject_low 5 ALIGNMENT 719 YS2-19o15.p1k chr12 386 1228 465384 466238 F 843 95.97 1241 reject_low 1 ALIGNMENT 119 YS2-19o15.q1k chr12 843 725 472464 472582 C 119 100.00 1357 reject_low 4 ALIGNMENT 0 YS2-19o15.q1k chr12 709 62 489482 489481 C 648 0.00 1357 reject_low 3 ALIGNMENT 0 YS2-19o15.p1k chr07 387 907 337156 337155 F 521 0.00 1241 reject_low 2 ALIGNMENT 0 YS2-19o15.q1k chr12 724 62 468931 468930 C 663 0.00 1357 reject_low 1 ALIGNMENT 153 YS2-19o16.p1k chr15 39 201 869830 869993 F 163 98.77 220 accept 0 ALIGNMENT 0 YS2-19o16.p1k chr15 202 220 869993 869992 F 19 0.00 220 accept 0 ALIGNMENT 997 YS2-19o17.p1k chr16 1167 32 726727 727868 C 1136 97.36 1225 accept 0 ALIGNMENT 1002 YS2-19o17.q1k chr16 48 1230 722444 723642 F 1183 95.86 1324 accept 0 ALIGNMENT 952 YS2-19o19.p1k chr14 1176 35 33664 34799 C 1142 95.27 1245 accept 0 ALIGNMENT 1043 YS2-19o19.q1k chr14 52 1231 29573 30763 F 1180 97.20 1330 accept 0 ALIGNMENT 1026 YS2-19o21.p1k chr16 1216 38 555997 557186 C 1179 96.86 1216 accept 0 ALIGNMENT 1023 YS2-19o21.q1k chr16 38 1224 551880 553073 F 1187 95.96 1285 accept 0 ALIGNMENT 38 YS2-19o22.q1k vc_7 184 221 13525 13562 F 38 100.00 221 reject_vc 3 ALIGNMENT 110 YS2-19o22.q1k chr10 37 156 203571 203690 F 120 100.00 221 reject_low 7 ALIGNMENT 0 YS2-19o22.q1k chr09 221 156 196651 196650 C 66 0.00 221 reject_low 10 ALIGNMENT 110 YS2-19o22.q1k chr13 37 156 504022 504141 F 120 100.00 221 reject_low 8 ALIGNMENT 0 YS2-19o22.q1k chr04 156 221 437515 437514 F 66 0.00 221 reject_low 20 ALIGNMENT 0 YS2-19o22.q1k chr16 221 181 442715 442714 C 41 0.00 221 ambiguous_trans 6 ALIGNMENT 0 YS2-19o22.q1k chr07 156 221 111229 111228 F 66 0.00 221 reject_low 11 ALIGNMENT 109 YS2-19o22.q1k chr09 155 37 196650 196768 C 119 100.00 221 reject_low 10 ALIGNMENT 0 YS2-19o22.q1k vc_7 62 183 13525 13524 F 122 0.00 221 reject_vc 3 ALIGNMENT 0 YS2-19o22.q1k chr07 221 156 931175 931174 C 66 0.00 221 reject_low 18 ALIGNMENT 0 YS2-19o22.q1k chr08 181 221 85930 85929 F 41 0.00 221 ambiguous_trans 5 ALIGNMENT 94 YS2-19o22.q1k chr14 155 37 632121 632239 C 119 95.80 221 reject_low 16 ALIGNMENT 0 YS2-19o22.q1k chr08 156 221 91757 91756 F 66 0.00 221 reject_low 14 ALIGNMENT 42 YS2-19o22.q1k vc_3 221 180 2472 2513 C 42 100.00 221 reject_vc 1 ALIGNMENT 106 YS2-19o22.q1k chr14 37 155 561860 561978 F 119 99.16 221 reject_low 12 ALIGNMENT 0 YS2-19o22.q1k chr13 157 221 504141 504140 F 65 0.00 221 reject_low 8 ALIGNMENT 109 YS2-19o22.q1k chr02 155 37 35848 35966 C 119 100.00 221 reject_low 9 ALIGNMENT 0 YS2-19o22.q1k chr02 221 157 643483 643482 C 65 0.00 221 reject_low 15 ALIGNMENT 139 YS2-19o22.q1k chr10 37 180 197716 197859 F 144 100.00 221 ambiguous_trans 4 ALIGNMENT 0 YS2-19o22.q1k chr13 221 156 808537 808536 C 66 0.00 221 reject_low 19 ALIGNMENT 0 YS2-19o22.q1k chr14 221 156 632122 632121 C 66 0.00 221 reject_low 16 ALIGNMENT 98 YS2-19o22.q1k chr02 156 37 643482 643601 C 120 96.67 221 reject_low 15 ALIGNMENT 0 YS2-19o22.q1k chr02 221 156 35849 35848 C 66 0.00 221 reject_low 9 ALIGNMENT 0 YS2-19o22.q1k vc_1 179 62 2514 2513 C 118 0.00 221 reject_vc 0 ALIGNMENT 0 YS2-19o22.q1k chr16 221 157 436887 436886 C 65 0.00 221 reject_low 13 ALIGNMENT 0 YS2-19o22.q1k vc_3 179 62 2514 2513 C 118 0.00 221 reject_vc 1 ALIGNMENT 106 YS2-19o22.q1k chr07 37 155 111111 111229 F 119 99.16 221 reject_low 11 ALIGNMENT 130 YS2-19o22.q1k chr16 180 37 442714 442857 C 144 97.92 221 ambiguous_trans 6 ALIGNMENT 0 YS2-19o22.q1k vc_4 62 179 5830 5829 F 118 0.00 221 reject_vc 2 ALIGNMENT 42 YS2-19o22.q1k vc_1 221 180 2472 2513 C 42 100.00 221 reject_vc 0 ALIGNMENT 42 YS2-19o22.q1k vc_4 180 221 5830 5871 F 42 100.00 221 reject_vc 2 ALIGNMENT 0 YS2-19o22.q1k chr14 156 221 561978 561977 F 66 0.00 221 reject_low 12 ALIGNMENT 0 YS2-19o22.q1k chr05 221 156 354357 354356 C 66 0.00 221 reject_low 17 ALIGNMENT 104 YS2-19o22.q1k chr16 156 37 436886 437005 C 120 98.33 221 reject_low 13 ALIGNMENT 0 YS2-19o22.q1k chr10 181 221 197859 197858 F 41 0.00 221 ambiguous_trans 4 ALIGNMENT 86 YS2-19o22.q1k chr04 37 155 437398 437515 F 119 94.12 221 reject_low 20 ALIGNMENT 89 YS2-19o22.q1k chr07 155 37 931174 931291 C 119 94.96 221 reject_low 18 ALIGNMENT 91 YS2-19o22.q1k chr05 155 37 354356 354474 C 119 94.96 221 reject_low 17 ALIGNMENT 133 YS2-19o22.q1k chr08 37 180 85787 85930 F 144 98.61 221 ambiguous_trans 5 ALIGNMENT 0 YS2-19o22.q1k chr10 157 221 203690 203689 F 65 0.00 221 reject_low 7 ALIGNMENT 89 YS2-19o22.q1k chr13 155 37 808536 808653 C 119 94.96 221 reject_low 19 ALIGNMENT 103 YS2-19o22.q1k chr08 37 155 91639 91757 F 119 98.32 221 reject_low 14 ALIGNMENT 628 YS2-19o23.q1k chr15 966 39 644013 644935 C 928 90.84 1360 accept 0 ALIGNMENT 278 YS2-19o24.p1k chr07 39 479 884933 885371 F 441 89.34 1291 accept 0 ALIGNMENT 1035 YS2-19o24.q1k chr07 1205 30 888755 889938 C 1176 96.94 1272 accept 0 ALIGNMENT 0 YS2-19p02.p1k chr06 508 62 15222 15221 C 447 0.00 1230 reject_low 3 ALIGNMENT 0 YS2-19p02.p1k chr14 159 62 17385 17384 C 98 0.00 1230 reject_low 1 ALIGNMENT 394 YS2-19p02.p1k chr10 316 1121 727073 727876 F 806 83.62 1230 reject_low 2 ALIGNMENT 332 YS2-19p02.p1k chr03 480 1223 314058 314799 F 744 82.66 1230 reject_low 4 ALIGNMENT 0 YS2-19p02.p1k chr15 925 62 2121 2120 C 864 0.00 1230 reject_low 5 ALIGNMENT 97 YS2-19p02.p1k chr15 1221 926 1828 2120 C 296 79.73 1230 reject_low 5 ALIGNMENT 521 YS2-19p02.p1k chr14 1158 160 16392 17384 C 999 85.29 1230 reject_low 1 ALIGNMENT 822 YS2-19p02.p1k chr04 1228 34 17777 18971 C 1195 90.38 1230 accept 0 ALIGNMENT 360 YS2-19p02.p1k chr06 1228 509 14505 15221 C 720 84.58 1230 reject_low 3 ALIGNMENT 0 YS2-19p02.p1k chr03 62 479 314058 314057 F 418 0.00 1230 reject_low 4 ALIGNMENT 0 YS2-19p02.p1k chr10 62 315 727073 727072 F 254 0.00 1230 reject_low 2 ALIGNMENT 1073 YS2-19p03.q1k chr14 49 1263 674493 675719 F 1215 96.71 1418 accept 0 ALIGNMENT 1031 YS2-19p03.p1k chr14 1235 40 675460 676660 C 1196 96.15 1258 accept 0 ALIGNMENT 196 YS2-19p05.q1k chr12 40 236 466465 466661 F 197 100.00 277 accept 1 ALIGNMENT 0 YS2-19p05.q1k vc_7 62 239 13525 13524 F 178 0.00 277 reject_low 14 ALIGNMENT 0 YS2-19p05.q1k vc_4 62 236 5831 5830 F 175 0.00 277 reject_low 12 ALIGNMENT 196 YS2-19p05.q1k chr12 40 236 457328 457524 F 197 100.00 277 accept 0 ALIGNMENT 0 YS2-19p05.q1k vc_1 236 62 2513 2512 C 175 0.00 277 reject_low 9 ALIGNMENT 0 YS2-19p05.q1k chr12 237 277 457524 457523 F 41 0.00 277 accept 0 ALIGNMENT 0 YS2-19p05.q1k chr12 237 277 466661 466660 F 41 0.00 277 accept 1 ALIGNMENT 439 YS2-19p05.p1k vc_2 692 1 1036 1749 C 692 89.60 694 reject_vc 4 ALIGNMENT 38 YS2-19p05.q1k vc_7 240 277 13525 13562 F 38 100.00 277 reject_low 14 ALIGNMENT 36 YS2-19p05.q1k vc_5 274 239 1 36 C 36 100.00 277 reject_low 15 ALIGNMENT 41 YS2-19p05.q1k vc_3 277 237 2472 2512 C 41 100.00 277 reject_low 11 ALIGNMENT 0 YS2-19p05.q1k vc_5 238 62 37 36 C 177 0.00 277 reject_low 15 ALIGNMENT 41 YS2-19p05.q1k vc_1 277 237 2472 2512 C 41 100.00 277 reject_low 9 ALIGNMENT 439 YS2-19p05.p1k vc_1 692 1 1036 1749 C 692 89.60 694 reject_vc 3 ALIGNMENT 439 YS2-19p05.p1k vc_3 692 1 1036 1749 C 692 89.60 694 reject_vc 5 ALIGNMENT 0 YS2-19p05.q1k vc_2 236 62 2146 2145 C 175 0.00 277 reject_low 10 ALIGNMENT 39 YS2-19p05.q1k vc_5 277 239 5025 5063 C 39 100.00 277 reject_low 13 ALIGNMENT 433 YS2-19p05.p1k vc_7 1 691 13918 14629 F 691 89.29 694 reject_vc 7 ALIGNMENT 0 YS2-19p05.q1k vc_3 236 62 2513 2512 C 175 0.00 277 reject_low 11 ALIGNMENT 41 YS2-19p05.q1k vc_4 237 277 5831 5871 F 41 100.00 277 reject_low 12 ALIGNMENT 433 YS2-19p05.p1k vc_7 1 691 456 1167 F 691 89.29 694 reject_vc 6 ALIGNMENT 442 YS2-19p05.p1k vc_5 692 1 3956 4669 C 692 89.74 694 reject_vc 2 ALIGNMENT 41 YS2-19p05.q1k vc_2 277 237 2105 2145 C 41 100.00 277 reject_low 10 ALIGNMENT 427 YS2-19p05.p1k vc_6 1 624 3712 4351 F 624 91.19 694 reject_vc 8 ALIGNMENT 0 YS2-19p05.q1k vc_5 238 62 5064 5063 C 177 0.00 277 reject_low 13 ALIGNMENT 1028 YS2-19p06.p1k chr16 1217 36 310674 311867 C 1182 96.95 1290 accept 0 ALIGNMENT 1043 YS2-19p06.q1k chr16 45 1226 306539 307734 F 1182 96.62 1418 accept 0 ALIGNMENT 924 YS2-19p07.q1k chr12 38 1057 466461 467496 F 1020 97.84 1362 reject_low 2 ALIGNMENT 1098 YS2-19p07.p1k chr12 1286 36 452638 453888 C 1251 96.16 1328 reject_low 1 ALIGNMENT 1098 YS2-19p07.p1k chr12 1286 36 461775 463025 C 1251 96.16 1328 accept 0 ALIGNMENT 924 YS2-19p07.q1k chr12 38 1057 457324 458359 F 1020 97.84 1362 accept 0 ALIGNMENT 987 YS2-19p08.q1k chr12 1157 28 460743 461886 C 1130 95.84 1410 accept 0 ALIGNMENT 0 YS2-19p08.q1k chr12 200 62 490544 490543 C 139 0.00 1410 reject_low 3 ALIGNMENT 987 YS2-19p08.q1k chr12 1157 28 451606 452749 C 1130 95.84 1410 reject_low 1 ALIGNMENT 724 YS2-19p08.q1k chr12 976 201 489767 490543 C 776 97.94 1410 reject_low 3 ALIGNMENT 1037 YS2-19p08.p1k chr12 40 1252 456363 457577 F 1213 95.14 1350 accept 0 ALIGNMENT 1036 YS2-19p08.p1k chr12 40 1206 465500 466664 F 1167 96.06 1350 reject_low 2 ALIGNMENT 886 YS2-19p10.q1k chr10 34 1104 123358 124448 F 1071 95.33 1329 accept 0 ALIGNMENT 942 YS2-19p10.p1k chr10 1208 38 126488 127674 C 1171 94.53 1315 accept 0 ALIGNMENT 1036 YS2-19p11.p1k chr14 1261 40 674372 675610 C 1222 95.66 1309 accept 0 ALIGNMENT 914 YS2-19p11.q1k chr14 38 1096 670856 671932 F 1059 96.69 1371 accept 0 ALIGNMENT 38 YS2-19p12.q1k vc_7 594 631 13525 13562 F 38 100.00 631 reject_low 6 ALIGNMENT 0 YS2-19p12.q1k vc_4 62 590 5831 5830 F 529 0.00 631 reject_low 4 ALIGNMENT 472 YS2-19p12.p1k chr08 597 38 78505 79060 C 560 97.68 616 accept_chi 1 ALIGNMENT 0 YS2-19p12.q1k vc_3 590 62 2513 2512 C 529 0.00 631 reject_low 3 ALIGNMENT 0 YS2-19p12.q1k vc_5 592 62 5064 5063 C 531 0.00 631 reject_low 5 ALIGNMENT 0 YS2-19p12.q1k vc_1 590 62 2513 2512 C 529 0.00 631 reject_low 2 ALIGNMENT 0 YS2-19p12.q1k chr08 591 631 79060 79059 F 41 0.00 631 accept_chi 0 ALIGNMENT 0 YS2-19p12.q1k vc_5 592 62 37 36 C 531 0.00 631 reject_low 7 ALIGNMENT 39 YS2-19p12.q1k vc_5 631 593 5025 5063 C 39 100.00 631 reject_low 5 ALIGNMENT 36 YS2-19p12.q1k vc_5 628 593 1 36 C 36 100.00 631 reject_low 7 ALIGNMENT 0 YS2-19p12.p1k chr08 616 598 78506 78505 C 19 0.00 616 accept_chi 1 ALIGNMENT 41 YS2-19p12.q1k vc_1 631 591 2472 2512 C 41 100.00 631 reject_low 2 ALIGNMENT 476 YS2-19p12.q1k chr08 32 590 78505 79060 F 559 97.85 631 accept_chi 0 ALIGNMENT 0 YS2-19p12.q1k vc_7 62 593 13525 13524 F 532 0.00 631 reject_low 6 ALIGNMENT 41 YS2-19p12.q1k vc_3 631 591 2472 2512 C 41 100.00 631 reject_low 3 ALIGNMENT 41 YS2-19p12.q1k vc_4 591 631 5831 5871 F 41 100.00 631 reject_low 4 ALIGNMENT 167 YS2-19p13.q1k chr04 42 232 1505777 1505968 F 191 97.91 271 ambiguous_tel 0 ALIGNMENT 0 YS2-19p13.q1k vc_7 62 233 13525 13524 F 172 0.00 271 reject_low 7 ALIGNMENT 149 YS2-19p13.p1k chr04 227 39 1505777 1505968 C 189 95.24 246 ambiguous_tel 1 ALIGNMENT 0 YS2-19p13.q1k vc_5 232 62 5064 5063 C 171 0.00 271 reject_low 6 ALIGNMENT 0 YS2-19p13.q1k vc_5 232 62 37 36 C 171 0.00 271 reject_low 8 ALIGNMENT 0 YS2-19p13.p1k chr04 246 228 1505778 1505777 C 19 0.00 246 ambiguous_tel 1 ALIGNMENT 36 YS2-19p13.q1k vc_5 268 233 1 36 C 36 100.00 271 reject_low 8 ALIGNMENT 0 YS2-19p13.q1k vc_2 231 62 2145 2144 C 170 0.00 271 reject_low 3 ALIGNMENT 0 YS2-19p13.q1k vc_4 62 231 5832 5831 F 170 0.00 271 reject_low 5 ALIGNMENT 38 YS2-19p13.q1k vc_7 234 271 13525 13562 F 38 100.00 271 reject_low 7 ALIGNMENT 40 YS2-19p13.q1k vc_4 232 271 5832 5871 F 40 100.00 271 reject_low 5 ALIGNMENT 0 YS2-19p13.q1k chr04 233 271 1505968 1505967 F 39 0.00 271 ambiguous_tel 0 ALIGNMENT 0 YS2-19p13.q1k vc_1 231 62 2512 2511 C 170 0.00 271 reject_low 2 ALIGNMENT 40 YS2-19p13.q1k vc_1 271 232 2472 2511 C 40 100.00 271 reject_low 2 ALIGNMENT 40 YS2-19p13.q1k vc_3 271 232 2472 2511 C 40 100.00 271 reject_low 4 ALIGNMENT 0 YS2-19p13.q1k vc_3 231 62 2512 2511 C 170 0.00 271 reject_low 4 ALIGNMENT 39 YS2-19p13.q1k vc_5 271 233 5025 5063 C 39 100.00 271 reject_low 6 ALIGNMENT 40 YS2-19p13.q1k vc_2 271 232 2105 2144 C 40 100.00 271 reject_low 3 ALIGNMENT 1035 YS2-19p14.q1k chr12 1118 32 456522 457616 C 1087 98.71 1367 accept 0 ALIGNMENT 1070 YS2-19p14.p1k chr12 34 1211 455994 457169 F 1178 97.45 1305 accept 0 ALIGNMENT 1070 YS2-19p14.p1k chr12 34 1211 465131 466306 F 1178 97.45 1305 accept 1 ALIGNMENT 1035 YS2-19p14.q1k chr12 1118 32 465659 466753 C 1087 98.71 1367 accept 1 ALIGNMENT 1034 YS2-19p15.p1k chr09 1271 38 123286 124528 C 1234 95.62 1281 accept 0 ALIGNMENT 927 YS2-19p15.q1k chr09 43 1116 119985 121078 F 1074 96.74 1376 accept 0 ALIGNMENT 86 YS2-19p15.q1k chr15 823 43 856594 857371 C 781 72.47 1376 reject_low 1 ALIGNMENT 0 YS2-19p15.q1k chr15 841 824 856595 856594 C 18 0.00 1376 reject_low 1 ALIGNMENT 778 YS2-19p16.q1k chr04 109 1144 350621 351642 F 1036 93.15 1366 accept 0 ALIGNMENT 23 YS2-19p16.q1k chr16 529 475 252245 252299 C 55 89.09 1366 reject_low 1 ALIGNMENT 0 YS2-19p16.q1k chr16 474 122 252300 252299 C 353 0.00 1366 reject_low 1 ALIGNMENT 0 YS2-19p16.q1k chr16 681 530 252246 252245 C 152 0.00 1366 reject_low 1 ALIGNMENT 986 YS2-19p16.p1k chr04 1142 33 351743 352866 C 1110 96.94 1250 accept 0 ALIGNMENT 0 YS2-19p17.q1k vc_7 62 555 13525 13524 F 494 0.00 593 reject_low 7 ALIGNMENT 36 YS2-19p17.q1k vc_5 590 555 1 36 C 36 100.00 593 reject_low 8 ALIGNMENT 0 YS2-19p17.q1k vc_4 62 552 5831 5830 F 491 0.00 593 reject_low 5 ALIGNMENT 0 YS2-19p17.q1k vc_2 552 62 2146 2145 C 491 0.00 593 reject_low 3 ALIGNMENT 0 YS2-19p17.q1k vc_5 554 62 5064 5063 C 493 0.00 593 reject_low 6 ALIGNMENT 476 YS2-19p17.p1k chr07 546 34 1002243 1002755 C 513 99.22 565 accept_chi 1 ALIGNMENT 0 YS2-19p17.q1k vc_3 552 62 2513 2512 C 491 0.00 593 reject_low 4 ALIGNMENT 0 YS2-19p17.q1k vc_5 554 62 37 36 C 493 0.00 593 reject_low 8 ALIGNMENT 0 YS2-19p17.q1k vc_1 552 62 2513 2512 C 491 0.00 593 reject_low 2 ALIGNMENT 479 YS2-19p17.q1k chr07 41 552 1002243 1002755 F 512 99.61 593 accept_chi 0 ALIGNMENT 0 YS2-19p17.p1k chr07 565 547 1002244 1002243 C 19 0.00 565 accept_chi 1 ALIGNMENT 41 YS2-19p17.q1k vc_1 593 553 2472 2512 C 41 100.00 593 reject_low 2 ALIGNMENT 38 YS2-19p17.q1k vc_7 556 593 13525 13562 F 38 100.00 593 reject_low 7 ALIGNMENT 41 YS2-19p17.q1k vc_3 593 553 2472 2512 C 41 100.00 593 reject_low 4 ALIGNMENT 39 YS2-19p17.q1k vc_5 593 555 5025 5063 C 39 100.00 593 reject_low 6 ALIGNMENT 41 YS2-19p17.q1k vc_2 593 553 2105 2145 C 41 100.00 593 reject_low 3 ALIGNMENT 0 YS2-19p17.q1k chr07 553 593 1002755 1002754 F 41 0.00 593 accept_chi 0 ALIGNMENT 41 YS2-19p17.q1k vc_4 553 593 5831 5871 F 41 100.00 593 reject_low 5 ALIGNMENT 235 YS2-19p18.p1k vc_2 1166 851 1783 2105 C 316 93.04 1266 reject_low 3 ALIGNMENT 0 YS2-19p18.p1k chr09 833 872 187574 187573 F 40 0.00 1266 accept_chi 1 ALIGNMENT 780 YS2-19p18.p1k chr09 43 832 186785 187574 F 790 100.00 1266 accept_chi 1 ALIGNMENT 0 YS2-19p18.p1k vc_1 850 62 2473 2472 C 789 0.00 1266 reject_low 9 ALIGNMENT 0 YS2-19p18.p1k vc_3 850 62 2473 2472 C 789 0.00 1266 reject_low 10 ALIGNMENT 26 YS2-19p18.p1k vc_1 881 851 2441 2472 C 31 96.77 1266 reject_low 9 ALIGNMENT 235 YS2-19p18.p1k vc_7 851 1166 100 422 F 316 93.04 1266 reject_low 7 ALIGNMENT 235 YS2-19p18.p1k vc_3 1166 851 1783 2105 C 316 93.04 1266 reject_low 4 ALIGNMENT 0 YS2-19p18.p1k vc_7 62 850 100 99 F 789 0.00 1266 reject_low 7 ALIGNMENT 0 YS2-19p18.p1k vc_1 850 62 2106 2105 C 789 0.00 1266 reject_low 2 ALIGNMENT 26 YS2-19p18.p1k vc_3 881 851 2441 2472 C 31 96.77 1266 reject_low 10 ALIGNMENT 0 YS2-19p18.p1k vc_4 62 850 5871 5870 F 789 0.00 1266 reject_low 5 ALIGNMENT 0 YS2-19p18.p1k vc_7 62 850 13562 13561 F 789 0.00 1266 reject_low 8 ALIGNMENT 0 YS2-19p18.p1k vc_3 850 62 2106 2105 C 789 0.00 1266 reject_low 4 ALIGNMENT 235 YS2-19p18.p1k vc_4 851 1166 5871 6193 F 316 93.04 1266 reject_low 5 ALIGNMENT 235 YS2-19p18.p1k vc_1 1166 851 1783 2105 C 316 93.04 1266 reject_low 2 ALIGNMENT 235 YS2-19p18.p1k vc_5 1166 851 4703 5025 C 316 93.04 1266 reject_low 6 ALIGNMENT 0 YS2-19p18.p1k vc_2 850 62 2106 2105 C 789 0.00 1266 reject_low 3 ALIGNMENT 0 YS2-19p18.p1k vc_5 850 62 5026 5025 C 789 0.00 1266 reject_low 6 ALIGNMENT 235 YS2-19p18.p1k vc_7 851 1166 13562 13884 F 316 93.04 1266 reject_low 8 ALIGNMENT 784 YS2-19p18.q1k chr09 841 47 186778 187572 C 795 99.87 842 accept_chi 0 ALIGNMENT 901 YS2-19p20.p1k chr16 1078 36 460448 461500 C 1043 96.45 1247 accept 0 ALIGNMENT 41 YS2-19p21.q1k vc_3 350 310 2472 2512 C 41 100.00 350 reject_low 4 ALIGNMENT 0 YS2-19p21.q1k vc_2 309 62 2146 2145 C 248 0.00 350 reject_low 3 ALIGNMENT 272 YS2-19p21.q1k chr09 309 37 374643 374915 C 273 100.00 350 accept_chi 0 ALIGNMENT 41 YS2-19p21.q1k vc_1 350 310 2472 2512 C 41 100.00 350 reject_low 2 ALIGNMENT 0 YS2-19p21.q1k vc_1 309 62 2513 2512 C 248 0.00 350 reject_low 2 ALIGNMENT 39 YS2-19p21.q1k vc_5 350 312 5025 5063 C 39 100.00 350 reject_low 6 ALIGNMENT 0 YS2-19p21.q1k chr09 350 310 374644 374643 C 41 0.00 350 accept_chi 0 ALIGNMENT 0 YS2-19p21.q1k vc_5 311 62 37 36 C 250 0.00 350 reject_low 8 ALIGNMENT 41 YS2-19p21.q1k vc_4 310 350 5831 5871 F 41 100.00 350 reject_low 5 ALIGNMENT 41 YS2-19p21.q1k vc_2 350 310 2105 2145 C 41 100.00 350 reject_low 3 ALIGNMENT 254 YS2-19p21.p1k chr09 34 302 374647 374915 F 269 98.51 318 accept_chi 1 ALIGNMENT 0 YS2-19p21.q1k vc_7 62 312 13525 13524 F 251 0.00 350 reject_low 7 ALIGNMENT 0 YS2-19p21.q1k vc_5 311 62 5064 5063 C 250 0.00 350 reject_low 6 ALIGNMENT 38 YS2-19p21.q1k vc_7 313 350 13525 13562 F 38 100.00 350 reject_low 7 ALIGNMENT 0 YS2-19p21.q1k vc_3 309 62 2513 2512 C 248 0.00 350 reject_low 4 ALIGNMENT 0 YS2-19p21.p1k chr09 303 318 374915 374914 F 16 0.00 318 accept_chi 1 ALIGNMENT 36 YS2-19p21.q1k vc_5 347 312 1 36 C 36 100.00 350 reject_low 8 ALIGNMENT 0 YS2-19p21.q1k vc_4 62 309 5831 5830 F 248 0.00 350 reject_low 5 ALIGNMENT 1025 YS2-19p23.p1k chr15 1183 38 849673 850820 C 1146 97.47 1225 accept 0 ALIGNMENT 0 YS2-1a01.q1k vc_4 95 390 126 125 F 296 0.00 1396 reject_low 10 ALIGNMENT 0 YS2-1a01.q1k vc_7 390 95 2728 2727 C 296 0.00 1396 reject_low 3 ALIGNMENT 39 YS2-1a01.q1k vc_5 391 353 5025 5063 C 39 100.00 1396 reject_low 14 ALIGNMENT 41 YS2-1a01.q1k vc_4 850 786 6275 6339 C 65 89.23 1396 reject_low 18 ALIGNMENT 0 YS2-1a01.q1k vc_1 348 95 2515 2514 C 254 0.00 1396 reject_low 11 ALIGNMENT 0 YS2-1a01.q1k vc_3 348 95 2515 2514 C 254 0.00 1396 reject_low 13 ALIGNMENT 406 YS2-1a01.q1k vc_7 917 391 2206 2727 C 527 93.17 1396 reject_low 3 ALIGNMENT 0 YS2-1a01.q1k vc_7 392 655 100 99 F 264 0.00 1396 reject_low 15 ALIGNMENT 0 YS2-1a01.q1k vc_1 655 392 2473 2472 C 264 0.00 1396 reject_low 11 ALIGNMENT 83 YS2-1a01.q1k vc_4 477 391 1448 1534 C 87 98.85 1396 reject_low 19 ALIGNMENT 0 YS2-1a01.q1k vc_4 392 391 5872 6353 F 0 0.00 1396 reject_low 9 ALIGNMENT 0 YS2-1a01.q1k vc_1 95 390 2531 2530 F 296 0.00 1396 reject_low 5 ALIGNMENT 195 YS2-1a01.q1k vc_7 850 601 4923 5172 C 250 92.80 1396|0,1 reject_low 8 ALIGNMENT 0 YS2-1a01.q1k vc_3 655 392 2473 2472 C 264 0.00 1396 reject_low 13 ALIGNMENT 285 YS2-1a01.q1k chr14 28 350 368377 368696 F 323 98.14 1396 accept_chi 1 ALIGNMENT 42 YS2-1a01.q1k vc_2 391 349 2105 2147 C 43 100.00 1396 reject_low 12 ALIGNMENT 0 YS2-1a01.q1k vc_4 390 95 1535 1534 C 296 0.00 1396 reject_low 19 ALIGNMENT 0 YS2-1a01.q1k vc_4 553 785 288 1547 F 233 0.00 1396 reject_low 10 ALIGNMENT 399 YS2-1a01.q1k vc_4 917 391 5289 5812 C 527 92.79 1396 reject_low 4 ALIGNMENT 0 YS2-1a01.q1k vc_2 95 390 2164 2163 F 296 0.00 1396 reject_low 6 ALIGNMENT 0 YS2-1a01.q1k vc_3 95 390 2531 2530 F 296 0.00 1396 reject_low 7 ALIGNMENT 0 YS2-1a01.q1k vc_4 390 95 5813 5812 C 296 0.00 1396 reject_low 4 ALIGNMENT 0 YS2-1a01.q1k vc_7 95 353 13525 13524 F 259 0.00 1396 reject_low 16 ALIGNMENT 0 YS2-1a01.q1k vc_5 655 389 2 1 C 267 0.00 1396 reject_low 17 ALIGNMENT 45 YS2-1a01.q1k vc_7 602 551 6360 6411 C 52 96.15 1396|1,0 reject_low 8 ALIGNMENT 0 YS2-1a01.q1k vc_7 392 655 13562 13561 F 264 0.00 1396 reject_low 16 ALIGNMENT 0 YS2-1a01.q1k vc_4 785 478 113 1447 C 308 0.00 1396 reject_low 19 ALIGNMENT 394 YS2-1a01.q1k vc_2 391 850 2164 2623 F 460 95.43 1396 reject_low 6 ALIGNMENT 42 YS2-1a01.q1k vc_1 391 349 2472 2514 C 43 100.00 1396 reject_low 11 ALIGNMENT 406 YS2-1a01.q1k vc_5 391 917 2398 2919 F 527 93.17 1396 reject_low 2 ALIGNMENT 36 YS2-1a01.q1k vc_5 388 353 1 36 C 36 100.00 1396 reject_low 17 ALIGNMENT 394 YS2-1a01.q1k vc_1 391 850 2531 2990 F 460 95.43 1396 reject_low 5 ALIGNMENT 394 YS2-1a01.q1k vc_3 391 850 2531 2990 F 460 95.43 1396 reject_low 7 ALIGNMENT 0 YS2-1a01.q1k vc_5 95 390 2398 2397 F 296 0.00 1396 reject_low 2 ALIGNMENT 306 YS2-1a01.p1k chr14 352 33 368377 368696 C 320 100.00 370 accept_chi 0 ALIGNMENT 42 YS2-1a01.q1k vc_3 391 349 2472 2514 C 43 100.00 1396 reject_low 13 ALIGNMENT 41 YS2-1a01.q1k vc_4 850 786 48 112 C 65 89.23 1396 reject_low 19 ALIGNMENT 0 YS2-1a01.q1k vc_7 550 95 6412 6411 C 456 0.00 1396 reject_low 8 ALIGNMENT 0 YS2-1a01.q1k vc_5 352 95 5064 5063 C 258 0.00 1396 reject_low 14 ALIGNMENT 0 YS2-1a01.q1k vc_2 655 392 2106 2105 C 264 0.00 1396 reject_low 12 ALIGNMENT 38 YS2-1a01.q1k vc_7 354 391 63 100 F 38 100.00 1396 reject_low 15 ALIGNMENT 0 YS2-1a01.q1k vc_7 601 602 5172 6360 C 0 0.00 1396 reject_low 8 ALIGNMENT 0 YS2-1a01.q1k vc_2 348 95 2148 2147 C 254 0.00 1396 reject_low 12 ALIGNMENT 0 YS2-1a01.q1k vc_7 95 353 63 62 F 259 0.00 1396 reject_low 15 ALIGNMENT 0 YS2-1a01.q1k vc_5 352 95 37 36 C 258 0.00 1396 reject_low 17 ALIGNMENT 42 YS2-1a01.q1k vc_4 349 391 5829 5871 F 43 100.00 1396 reject_low 9 ALIGNMENT 0 YS2-1a01.q1k vc_4 553 655 6514 6513 F 103 0.00 1396 reject_low 9 ALIGNMENT 41 YS2-1a01.q1k vc_4 786 850 1548 1612 F 65 89.23 1396 reject_low 10 ALIGNMENT 0 YS2-1a01.q1k chr14 351 655 368696 368695 F 305 0.00 1396 accept_chi 1 ALIGNMENT 153 YS2-1a01.q1k vc_4 391 552 126 287 F 162 98.77 1396 reject_low 10 ALIGNMENT 153 YS2-1a01.q1k vc_4 391 552 6353 6514 F 162 98.77 1396|1,0 reject_low 9 ALIGNMENT 38 YS2-1a01.q1k vc_7 354 391 13525 13562 F 38 100.00 1396 reject_low 16 ALIGNMENT 0 YS2-1a01.q1k vc_4 785 95 6340 6339 C 691 0.00 1396 reject_low 18 ALIGNMENT 0 YS2-1a01.q1k vc_5 655 392 5026 5025 C 264 0.00 1396 reject_low 14 ALIGNMENT 0 YS2-1a01.p1k chr14 370 353 368378 368377 C 18 0.00 370 accept_chi 0 ALIGNMENT 0 YS2-1a01.q1k vc_4 95 348 5829 5828 F 254 0.00 1396 reject_low 9 ALIGNMENT 0 YS2-1a02.p1k chrm 512 263 6190 6189 C 250 0.00 1339 reject_low 2 ALIGNMENT 44 YS2-1a02.p1k chrm 200 149 34150 34200 C 52 96.15 1339|0,7 reject_low 3 ALIGNMENT 40 YS2-1a02.p1k chrm 262 205 65064 65120 C 58 93.10 1339 reject_low 6 ALIGNMENT 307 YS2-1a02.p1k chrm 961 317 72384 73012 C 645 90.54 1339|0,1 accept 0 ALIGNMENT 0 YS2-1a02.p1k chrm 261 512 77099 77098 F 252 0.00 1339 reject_low 5 ALIGNMENT 28 YS2-1a02.p1k chrm 161 120 34238 34278 C 42 95.24 1339|6,0 reject_low 3 ALIGNMENT 42 YS2-1a02.p1k chrm 209 260 77048 77099 F 52 94.23 1339 reject_low 5 ALIGNMENT 0 YS2-1a02.p1k chrm 512 260 68021 68020 C 253 0.00 1339 reject_low 7 ALIGNMENT 0 YS2-1a02.p1k chrm 119 92 34279 34278 C 28 0.00 1339 reject_low 3 ALIGNMENT 37 YS2-1a02.p1k chrm 553 497 6178 6234 C 57 91.23 1339 reject_low 1 ALIGNMENT 27 YS2-1a02.p1k chrm 259 221 68020 68058 C 39 94.87 1339 reject_low 7 ALIGNMENT 33 YS2-1a02.p1k chrm 496 540 77055 77099 F 45 93.33 1339 reject_low 4 ALIGNMENT 0 YS2-1a02.p1k chrm 317 318 73012 73050 C 0 0.00 1339 accept 0 ALIGNMENT 0 YS2-1a02.p1k chrm 496 92 6235 6234 C 405 0.00 1339 reject_low 1 ALIGNMENT 0 YS2-1a02.p1k chrm 179 92 72876 72875 C 88 0.00 1339 reject_low 8 ALIGNMENT 42 YS2-1a02.p1k chrm 553 490 65053 65114 C 64 92.19 1339 reject_low 8 ALIGNMENT 0 YS2-1a02.p1k chrm 92 495 77055 77054 F 404 0.00 1339 reject_low 4 ALIGNMENT 0 YS2-1a02.p1k chrm 512 201 34151 34150 C 312 0.00 1339 reject_low 3 ALIGNMENT 163 YS2-1a02.p1k chrm 279 67 73104 73317 C 213 93.90 1339 accept 0 ALIGNMENT 0 YS2-1a02.p1k chrm 92 208 77048 77047 F 117 0.00 1339 reject_low 5 ALIGNMENT 0 YS2-1a02.p1k chrm 220 92 68059 68058 C 129 0.00 1339 reject_low 7 ALIGNMENT 24 YS2-1a02.p1k chrm 318 280 73050 73088 C 39 97.44 1339|1,0 accept 0 ALIGNMENT 46 YS2-1a02.p1k chrm 262 188 6189 6260 C 75 89.33 1339 reject_low 2 ALIGNMENT 0 YS2-1a02.p1k chrm 512 263 65065 65064 C 250 0.00 1339 reject_low 6 ALIGNMENT 0 YS2-1a02.p1k chrm 489 263 65115 72788 C 227 0.00 1339 reject_low 8 ALIGNMENT 0 YS2-1a02.p1k chrm 187 92 6261 6260 C 96 0.00 1339 reject_low 2 ALIGNMENT 0 YS2-1a02.p1k chrm 279 280 73089 73103 C 0 0.00 1339 accept 0 ALIGNMENT 49 YS2-1a02.p1k chrm 262 180 72789 72875 C 83 87.95 1339 reject_low 8 ALIGNMENT 0 YS2-1a02.p1k chrm 204 92 65121 65120 C 113 0.00 1339 reject_low 6 ALIGNMENT 0 YS2-1a02.p1k chrm 155 156 34194 34243 C 0 0.00 1339 reject_low 3 ALIGNMENT 977 YS2-1a03.p1k chr09 35 1120 241569 242669 F 1086 97.15 1235 accept 0 ALIGNMENT 189 YS2-1a03.q1k chr07 78 569 74686 75179 F 492 79.88 1427 reject_low 1 ALIGNMENT 0 YS2-1a03.q1k chr09 561 562 246214 246551 C 0 0.00 1427 accept 0 ALIGNMENT 0 YS2-1a03.q1k chr09 678 679 246014 246096 C 0 0.00 1427 accept 0 ALIGNMENT 109 YS2-1a03.q1k chr09 682 559 246093 246216 C 124 97.58 1427|4,3 accept 0 ALIGNMENT 0 YS2-1a03.q1k chr07 62 77 74686 74685 F 16 0.00 1427 reject_low 1 ALIGNMENT 500 YS2-1a03.q1k chr09 563 26 246550 247087 C 538 97.77 1427|2,0 accept 0 ALIGNMENT 106 YS2-1a03.q1k chr09 939 675 245758 246017 C 265 84.15 1427|0,4 accept 0 ALIGNMENT 0 YS2-1a03.q1k chr07 570 603 75179 75178 F 34 0.00 1427 reject_low 1 ALIGNMENT 733 YS2-1a04.q1k chr13 27 974 646155 647105 F 948 94.20 1376 accept 0 ALIGNMENT 956 YS2-1a04.p1k chr13 1143 31 649340 650464 C 1113 96.95 1233 accept 0 ALIGNMENT 880 YS2-1a07.q1k chr16 31 1090 80439 81492 F 1060 95.66 1464 accept 0 ALIGNMENT 1055 YS2-1a07.p1k chr16 1279 30 84905 86147 C 1250 95.84 1290 accept 0 ALIGNMENT 990 YS2-1a08.p1k chr12 30 1115 463116 464220 F 1086 97.97 1256 accept 1 ALIGNMENT 990 YS2-1a08.p1k chr12 30 1115 453979 455083 F 1086 97.97 1256 accept 0 ALIGNMENT 758 YS2-1a08.q1k chr12 941 1 457666 458600 C 941 94.90 1341 accept 0 ALIGNMENT 758 YS2-1a08.q1k chr12 941 1 466803 467737 C 941 94.90 1341 accept 1 ALIGNMENT 452 YS2-1a09.q1k chr12 20 486 490077 490543 F 467 99.14 1469 reject_low 2 ALIGNMENT 893 YS2-1a09.p1k chr12 1040 31 454775 455800 C 1010 97.23 1427 accept 0 ALIGNMENT 0 YS2-1a09.q1k chr12 487 658 490543 490542 F 172 0.00 1469 reject_low 2 ALIGNMENT 774 YS2-1a09.q1k chr12 20 955 461246 462167 F 936 95.41 1469 accept 1 ALIGNMENT 774 YS2-1a09.q1k chr12 20 955 452109 453030 F 936 95.41 1469 accept 0 ALIGNMENT 893 YS2-1a09.p1k chr12 1040 31 463912 464937 C 1010 97.23 1427 accept 1 ALIGNMENT 0 YS2-1a10.q1k vc_5 189 107 5064 5063 C 83 0.00 1467 reject_low 14 ALIGNMENT 42 YS2-1a10.q1k vc_1 228 187 2472 2513 C 42 100.00 1467 reject_low 11 ALIGNMENT 0 YS2-1a10.q1k vc_4 107 227 126 125 F 121 0.00 1467 reject_low 7 ALIGNMENT 0 YS2-1a10.q1k chr07 188 382 271001 271000 F 195 0.00 1467 accept 0 ALIGNMENT 87 YS2-1a10.q1k vc_4 316 228 1446 1534 C 89 100.00 1467 reject_low 10 ALIGNMENT 42 YS2-1a10.q1k vc_4 187 228 5830 5871 F 42 100.00 1467 reject_low 9 ALIGNMENT 0 YS2-1a10.q1k vc_7 438 439 5172 6360 C 0 0.00 1467 reject_low 8 ALIGNMENT 39 YS2-1a10.q1k vc_5 228 190 5025 5063 C 39 100.00 1467 reject_low 14 ALIGNMENT 112 YS2-1a10.q1k chr07 37 187 270854 271001 F 151 94.04 1467 accept 0 ALIGNMENT 355 YS2-1a10.q1k vc_3 228 688 2531 2990 F 461 93.06 1467 reject_low 6 ALIGNMENT 0 YS2-1a10.q1k vc_7 229 382 13562 13561 F 154 0.00 1467 reject_low 16 ALIGNMENT 0 YS2-1a10.q1k vc_2 382 229 2106 2105 C 154 0.00 1467 reject_low 12 ALIGNMENT 38 YS2-1a10.q1k vc_7 191 228 13525 13562 F 38 100.00 1467 reject_low 16 ALIGNMENT 36 YS2-1a10.q1k vc_5 225 190 1 36 C 36 100.00 1467 reject_low 17 ALIGNMENT 0 YS2-1a10.q1k vc_5 107 227 2398 2397 F 121 0.00 1467 reject_low 1 ALIGNMENT 0 YS2-1a10.q1k vc_4 227 107 5813 5812 C 121 0.00 1467 reject_low 3 ALIGNMENT 0 YS2-1a10.q1k vc_4 227 107 1535 1534 C 121 0.00 1467 reject_low 10 ALIGNMENT 0 YS2-1a10.q1k vc_5 382 229 5026 5025 C 154 0.00 1467 reject_low 14 ALIGNMENT 0 YS2-1a10.q1k vc_4 229 228 5872 6353 F 0 0.00 1467 reject_low 9 ALIGNMENT 0 YS2-1a10.q1k vc_1 382 229 2473 2472 C 154 0.00 1467 reject_low 11 ALIGNMENT 0 YS2-1a10.q1k vc_7 229 382 100 99 F 154 0.00 1467 reject_low 15 ALIGNMENT 0 YS2-1a10.q1k vc_5 382 226 2 1 C 157 0.00 1467 reject_low 17 ALIGNMENT 0 YS2-1a10.q1k vc_1 107 227 2531 2530 F 121 0.00 1467 reject_low 4 ALIGNMENT 42 YS2-1a10.q1k vc_7 439 388 6360 6411 C 52 94.23 1467|1,0 reject_low 8 ALIGNMENT 0 YS2-1a10.q1k vc_2 107 227 2164 2163 F 121 0.00 1467 reject_low 5 ALIGNMENT 42 YS2-1a10.q1k vc_3 228 187 2472 2513 C 42 100.00 1467 reject_low 13 ALIGNMENT 0 YS2-1a10.q1k vc_4 382 317 1447 1446 C 66 0.00 1467 reject_low 10 ALIGNMENT 0 YS2-1a10.q1k vc_1 186 107 2514 2513 C 80 0.00 1467 reject_low 11 ALIGNMENT 0 YS2-1a10.q1k vc_2 186 107 2147 2146 C 80 0.00 1467 reject_low 12 ALIGNMENT 359 YS2-1a10.q1k vc_5 228 721 2398 2887 F 494 91.90 1467 reject_low 1 ALIGNMENT 0 YS2-1a10.q1k vc_5 189 107 37 36 C 83 0.00 1467 reject_low 17 ALIGNMENT 355 YS2-1a10.q1k vc_1 228 688 2531 2990 F 461 93.06 1467 reject_low 4 ALIGNMENT 38 YS2-1a10.q1k vc_7 191 228 63 100 F 38 100.00 1467 reject_low 15 ALIGNMENT 359 YS2-1a10.q1k vc_7 721 228 2238 2727 C 494 91.90 1467 reject_low 2 ALIGNMENT 355 YS2-1a10.q1k vc_2 228 688 2164 2623 F 461 93.06 1467 reject_low 5 ALIGNMENT 0 YS2-1a10.q1k vc_4 107 186 5830 5829 F 80 0.00 1467 reject_low 9 ALIGNMENT 42 YS2-1a10.q1k vc_2 228 187 2105 2146 C 42 100.00 1467 reject_low 12 ALIGNMENT 0 YS2-1a10.q1k vc_3 382 229 2473 2472 C 154 0.00 1467 reject_low 13 ALIGNMENT 0 YS2-1a10.q1k vc_3 107 227 2531 2530 F 121 0.00 1467 reject_low 6 ALIGNMENT 0 YS2-1a10.q1k vc_7 387 107 6412 6411 C 281 0.00 1467 reject_low 8 ALIGNMENT 157 YS2-1a10.q1k vc_4 228 389 126 287 F 162 99.38 1467 reject_low 7 ALIGNMENT 156 YS2-1a10.q1k vc_7 688 438 4923 5172 C 251 88.45 1467|0,1 reject_low 8 ALIGNMENT 0 YS2-1a10.q1k vc_7 107 190 13525 13524 F 84 0.00 1467 reject_low 16 ALIGNMENT 157 YS2-1a10.q1k vc_4 228 389 6353 6514 F 162 99.38 1467|1,0 reject_low 9 ALIGNMENT 0 YS2-1a10.q1k vc_7 107 190 63 62 F 84 0.00 1467 reject_low 15 ALIGNMENT 352 YS2-1a10.q1k vc_4 721 228 5321 5812 C 494 91.50 1467 reject_low 3 ALIGNMENT 0 YS2-1a10.q1k vc_3 186 107 2514 2513 C 80 0.00 1467 reject_low 13 ALIGNMENT 0 YS2-1a10.q1k vc_7 227 107 2728 2727 C 121 0.00 1467 reject_low 2 ALIGNMENT 805 YS2-1a11.q1k chr12 24 1114 1001117 1002206 F 1091 92.76 1387 accept 0 ALIGNMENT 969 YS2-1a11.p1k chr12 1122 32 1006324 1007419 C 1091 97.43 1260 accept 0 ALIGNMENT 52 YS2-1a12.p1k vc_1 768 552 8951 9173 C 217 77.42 828 reject_low 7 ALIGNMENT 548 YS2-1a12.p1k vc_1 768 1 977 1749 C 768 91.15 828 reject_vc 1 ALIGNMENT 548 YS2-1a12.p1k vc_3 768 1 977 1749 C 768 91.15 828 reject_vc 3 ALIGNMENT 549 YS2-1a12.p1k vc_6 1 665 3712 4376 F 665 94.59 828 reject_vc 5 ALIGNMENT 551 YS2-1a12.p1k vc_5 768 1 3897 4669 C 768 91.28 828 reject_vc 0 ALIGNMENT 548 YS2-1a12.p1k vc_2 768 1 977 1749 C 768 91.15 828 reject_vc 2 ALIGNMENT 52 YS2-1a12.p1k vc_2 768 552 8584 8806 C 217 77.42 828 reject_low 8 ALIGNMENT 0 YS2-1a12.p1k vc_1 551 62 9174 9173 C 490 0.00 828 reject_low 7 ALIGNMENT 542 YS2-1a12.p1k vc_7 1 768 456 1228 F 768 90.89 828 reject_vc 4 ALIGNMENT 540 YS2-1a12.p1k vc_7 1 665 13918 14582 F 665 94.14 828 reject_vc 6 ALIGNMENT 52 YS2-1a12.p1k vc_3 768 552 8222 8444 C 217 77.42 828 reject_low 9 ALIGNMENT 0 YS2-1a12.p1k vc_2 551 62 8807 8806 C 490 0.00 828 reject_low 8 ALIGNMENT 0 YS2-1a12.p1k vc_3 551 62 8445 8444 C 490 0.00 828 reject_low 9 ALIGNMENT 1027 YS2-1a13.p1k chr10 1164 32 338198 339340 C 1133 97.35 1373 accept 0 ALIGNMENT 0 YS2-1a13.p1k chr10 62 184 453595 453594 F 123 0.00 1373 reject_low 1 ALIGNMENT 718 YS2-1a13.q1k chr10 44 951 337724 338624 F 908 93.83 1448 accept 0 ALIGNMENT 109 YS2-1a13.q1k chr07 815 501 883509 883822 C 315 78.73 1448 reject_low 2 ALIGNMENT 0 YS2-1a13.p1k chr07 62 186 882817 882816 F 125 0.00 1373 reject_low 2 ALIGNMENT 140 YS2-1a13.q1k chr10 815 494 454289 454609 C 322 81.68 1448 reject_low 1 ALIGNMENT 0 YS2-1a13.q1k chr10 493 62 454610 454609 C 432 0.00 1448 reject_low 1 ALIGNMENT 589 YS2-1a13.p1k chr07 187 1164 882817 883804 F 978 87.12 1373 reject_low 2 ALIGNMENT 0 YS2-1a13.q1k chr07 500 62 883823 883822 C 439 0.00 1448 reject_low 2 ALIGNMENT 605 YS2-1a13.p1k chr10 185 1078 453595 454490 F 894 89.37 1373 reject_low 1 ALIGNMENT 947 YS2-1a14.p1k chr15 1097 33 277253 278330 C 1065 97.75 1324 accept 0 ALIGNMENT 787 YS2-1a14.q1k chr15 1 955 273037 273995 F 955 95.08 1325 accept 0 ALIGNMENT 0 YS2-1a15.p1k chr04 209 225 819962 819961 F 17 0.00 225 accept 0 ALIGNMENT 163 YS2-1a15.p1k chr04 36 208 819790 819962 F 173 100.00 225 accept 0 ALIGNMENT 689 YS2-1a16.q1k chr15 36 1066 714448 715462 F 1031 92.92 1397 accept 0 ALIGNMENT 1016 YS2-1a16.p1k chr15 1209 33 717798 718977 C 1177 96.69 1231 accept 0 ALIGNMENT 646 YS2-1a18.q1k chr04 46 919 1226498 1227355 F 874 93.48 1414 accept 0 ALIGNMENT 996 YS2-1a18.p1k chr04 1240 29 1229882 1231100 C 1212 95.46 1241 accept 0 ALIGNMENT 760 YS2-1a19.q1k chr04 978 28 745792 746732 C 951 95.06 1365 accept 0 ALIGNMENT 1055 YS2-1a19.p1k chr04 36 1281 742528 743756 F 1246 95.91 1367 accept 0 ALIGNMENT 305 YS2-1a22.q1k chr05 440 48 475189 475570 C 393 94.66 1648 accept 0 ALIGNMENT 978 YS2-1a22.p1k chr05 33 1215 470311 471487 F 1183 95.35 1253 accept 0 ALIGNMENT 0 YS2-1a23.q1k vc_3 260 77 2513 2512 C 184 0.00 1429 reject_low 13 ALIGNMENT 0 YS2-1a23.q1k vc_5 380 302 5026 5025 C 79 0.00 1429 reject_low 14 ALIGNMENT 252 YS2-1a23.q1k vc_1 301 642 2531 2871 F 342 91.81 1429 reject_low 1 ALIGNMENT 145 YS2-1a23.q1k vc_4 301 462 6353 6514 F 162 96.91 1429|1,0 reject_low 8 ALIGNMENT 0 YS2-1a23.q1k vc_4 77 260 5831 5830 F 184 0.00 1429 reject_low 8 ALIGNMENT 0 YS2-1a23.q1k vc_3 77 300 2531 2530 F 224 0.00 1429 reject_low 3 ALIGNMENT 0 YS2-1a23.q1k vc_4 77 300 126 125 F 224 0.00 1429 reject_low 7 ALIGNMENT 87 YS2-1a23.q1k vc_4 389 301 1446 1534 C 89 100.00 1429 reject_low 9 ALIGNMENT 61 YS2-1a23.q1k vc_7 642 511 5042 5172 C 132 83.33 1429|0,1 reject_low 10 ALIGNMENT 0 YS2-1a23.q1k vc_7 77 263 13525 13524 F 187 0.00 1429 reject_low 15 ALIGNMENT 41 YS2-1a23.q1k vc_4 261 301 5831 5871 F 41 100.00 1429 reject_low 8 ALIGNMENT 0 YS2-1a23.q1k vc_1 77 300 2531 2530 F 224 0.00 1429 reject_low 1 ALIGNMENT 0 YS2-1a23.q1k vc_2 77 300 2164 2163 F 224 0.00 1429 reject_low 2 ALIGNMENT 190 YS2-1a23.q1k chr13 260 42 563949 564168 C 219 97.26 1429 accept 0 ALIGNMENT 0 YS2-1a23.q1k vc_5 262 77 5064 5063 C 186 0.00 1429 reject_low 14 ALIGNMENT 0 YS2-1a23.q1k vc_5 77 300 2398 2397 F 224 0.00 1429 reject_low 4 ALIGNMENT 245 YS2-1a23.q1k vc_4 642 301 5470 5812 C 342 91.23 1429 reject_low 6 ALIGNMENT 0 YS2-1a23.q1k vc_7 460 77 6412 6411 C 384 0.00 1429 reject_low 10 ALIGNMENT 252 YS2-1a23.q1k vc_5 301 642 2398 2738 F 342 91.81 1429 reject_low 4 ALIGNMENT 0 YS2-1a23.q1k vc_4 300 77 5813 5812 C 224 0.00 1429 reject_low 6 ALIGNMENT 0 YS2-1a23.q1k vc_7 511 512 5172 6360 C 0 0.00 1429 reject_low 10 ALIGNMENT 39 YS2-1a23.q1k vc_5 301 263 5025 5063 C 39 100.00 1429 reject_low 14 ALIGNMENT 0 YS2-1a23.q1k vc_3 380 302 2473 2472 C 79 0.00 1429 reject_low 13 ALIGNMENT 0 YS2-1a23.q1k vc_2 380 302 2106 2105 C 79 0.00 1429 reject_low 12 ALIGNMENT 0 YS2-1a23.q1k vc_2 260 77 2146 2145 C 184 0.00 1429 reject_low 12 ALIGNMENT 41 YS2-1a23.q1k vc_3 301 261 2472 2512 C 41 100.00 1429 reject_low 13 ALIGNMENT 0 YS2-1a23.q1k vc_1 260 77 2513 2512 C 184 0.00 1429 reject_low 11 ALIGNMENT 0 YS2-1a23.q1k vc_5 380 299 2 1 C 82 0.00 1429 reject_low 16 ALIGNMENT 45 YS2-1a23.q1k vc_7 512 461 6360 6411 C 52 96.15 1429|1,0 reject_low 10 ALIGNMENT 0 YS2-1a23.q1k vc_5 262 77 37 36 C 186 0.00 1429 reject_low 16 ALIGNMENT 0 YS2-1a23.q1k vc_4 302 301 5872 6353 F 0 0.00 1429 reject_low 8 ALIGNMENT 0 YS2-1a23.q1k vc_7 300 77 2728 2727 C 224 0.00 1429 reject_low 5 ALIGNMENT 252 YS2-1a23.q1k vc_2 301 642 2164 2504 F 342 91.81 1429 reject_low 2 ALIGNMENT 38 YS2-1a23.q1k vc_7 264 301 13525 13562 F 38 100.00 1429 reject_low 15 ALIGNMENT 36 YS2-1a23.q1k vc_5 298 263 1 36 C 36 100.00 1429 reject_low 16 ALIGNMENT 252 YS2-1a23.q1k vc_7 642 301 2387 2727 C 342 91.81 1429 reject_low 5 ALIGNMENT 0 YS2-1a23.q1k vc_4 300 77 1535 1534 C 224 0.00 1429 reject_low 9 ALIGNMENT 145 YS2-1a23.q1k vc_4 301 462 126 287 F 162 96.91 1429 reject_low 7 ALIGNMENT 0 YS2-1a23.q1k vc_7 302 380 13562 13561 F 79 0.00 1429 reject_low 15 ALIGNMENT 41 YS2-1a23.q1k vc_1 301 261 2472 2512 C 41 100.00 1429 reject_low 11 ALIGNMENT 0 YS2-1a23.q1k vc_1 380 302 2473 2472 C 79 0.00 1429 reject_low 11 ALIGNMENT 41 YS2-1a23.q1k vc_2 301 261 2105 2145 C 41 100.00 1429 reject_low 12 ALIGNMENT 0 YS2-1a23.q1k chr13 380 261 563950 563949 C 120 0.00 1429 accept 0 ALIGNMENT 252 YS2-1a23.q1k vc_3 301 642 2531 2871 F 342 91.81 1429 reject_low 3 ALIGNMENT 591 YS2-1b01.q1k chr12 788 7 831936 832714 C 782 93.35 1270 accept 0 ALIGNMENT 940 YS2-1b01.p1k chr12 38 1226 830613 831821 F 1189 94.45 1263 accept 0 ALIGNMENT 980 YS2-1b02.p1k chr02 1207 33 688088 689276 C 1175 95.74 1259 accept 0 ALIGNMENT 736 YS2-1b02.q1k chr02 1 900 683857 684755 F 900 95.44 1328 accept 0 ALIGNMENT 773 YS2-1b04.q1k chr03 27 974 275763 276718 F 948 95.68 1347 accept 0 ALIGNMENT 1020 YS2-1b04.p1k chr03 1258 34 277720 278950 C 1225 95.84 1269 accept 0 ALIGNMENT 63 YS2-1b05.q1k vc_4 238 302 1548 1612 F 65 100.00 960 reject_vc 8 ALIGNMENT 443 YS2-1b05.q1k vc_7 687 1 1897 2569 C 687 90.10 960 reject_vc 2 ALIGNMENT 298 YS2-1b05.q1k vc_1 1 302 2689 2990 F 302 99.67 960 reject_vc 4 ALIGNMENT 92 YS2-1b05.q1k vc_7 422 305 4583 4699 C 118 94.07 960 reject_vc 7 ALIGNMENT 194 YS2-1b05.p1k chr11 237 37 436190 436390 C 201 99.50 255 accept 0 ALIGNMENT 63 YS2-1b05.q1k vc_4 302 238 6275 6339 C 65 100.00 960 reject_low 10 ALIGNMENT 0 YS2-1b05.q1k vc_7 53 54 5172 6360 C 0 0.00 960 reject_vc 7 ALIGNMENT 298 YS2-1b05.q1k vc_2 1 302 2322 2623 F 302 99.67 960 reject_vc 5 ALIGNMENT 447 YS2-1b05.q1k vc_5 1 717 2556 3257 F 717 89.12 960 reject_vc 1 ALIGNMENT 0 YS2-1b05.q1k vc_4 303 307 1613 1878 F 5 0.00 960 reject_vc 8 ALIGNMENT 385 YS2-1b05.q1k vc_4 422 1 5232 5654 C 422 97.39 960 reject_vc 3 ALIGNMENT 0 YS2-1b05.q1k vc_7 304 303 4700 4922 C 2 0.00 960 reject_vc 7 ALIGNMENT 0 YS2-1b05.q1k vc_4 237 62 113 112 C 176 0.00 960 reject_low 9 ALIGNMENT 298 YS2-1b05.q1k vc_3 1 302 2689 2990 F 302 99.67 960 reject_vc 6 ALIGNMENT 0 YS2-1b05.q1k vc_4 62 237 1548 1547 F 176 0.00 960 reject_vc 8 ALIGNMENT 51 YS2-1b05.q1k vc_7 54 3 6360 6411 C 52 100.00 960|1,0 reject_vc 7 ALIGNMENT 63 YS2-1b05.q1k vc_4 302 238 48 112 C 65 100.00 960 reject_low 9 ALIGNMENT 243 YS2-1b05.q1k vc_7 302 53 4923 5172 C 250 99.20 960|0,1 reject_vc 7 ALIGNMENT 139 YS2-1b05.q1k vc_4 308 717 1879 2273 F 410 81.22 960 reject_vc 8 ALIGNMENT 0 YS2-1b05.q1k vc_4 237 62 6340 6339 C 176 0.00 960 reject_low 10 ALIGNMENT 0 YS2-1b05.p1k chr11 255 238 436191 436190 C 18 0.00 255 accept 0 ALIGNMENT 846 YS2-1b06.q1k chr14 984 24 592926 593885 C 961 96.98 1337 accept 0 ALIGNMENT 1074 YS2-1b06.p1k chr14 34 1280 589687 590925 F 1247 96.55 1289 accept 0 ALIGNMENT 0 YS2-1b07.p1k chrm 62 730 84486 84485 F 669 0.00 1308 reject_low 5 ALIGNMENT 0 YS2-1b07.p1k chrm 62 556 62608 62607 F 495 0.00 1308 reject_low 6,7 ALIGNMENT 37 YS2-1b07.p1k chrm 731 774 84486 84529 F 44 97.73 1308 reject_low 5 ALIGNMENT 0 YS2-1b07.p1k chrm 780 917 62908 62907 F 138 0.00 1308 reject_low 7 ALIGNMENT 0 YS2-1b07.p1k chrm 603 730 62654 69441 F 128 0.00 1308 reject_low 6 ALIGNMENT 40 YS2-1b07.p1k chrm 774 731 9490 9533 C 44 100.00 1308 reject_low 4 ALIGNMENT 0 YS2-1b07.p1k chrm 917 775 9491 9490 C 143 0.00 1308 reject_low 4 ALIGNMENT 40 YS2-1b07.p1k chrm 731 774 9030 9073 F 44 100.00 1308 reject_low 3 ALIGNMENT 0 YS2-1b07.p1k chrm 775 917 84529 84528 F 143 0.00 1308 reject_low 5 ALIGNMENT 0 YS2-1b07.p1k chrm 730 62 9534 9533 C 669 0.00 1308 reject_low 4 ALIGNMENT 0 YS2-1b07.p1k chrm 603 730 62654 62859 F 128 0.00 1308 reject_low 7 ALIGNMENT 830 YS2-1b07.q1k chr16 30 1117 832917 833990 F 1088 93.84 1412 accept_chi 0 ALIGNMENT 433 YS2-1b07.p1k chrm 62 1173 1507 2541 F 1112 88.94 1308 accept_chi 1 ALIGNMENT 0 YS2-1b07.p1k chrm 817 917 69527 69526 F 101 0.00 1308 reject_low 6 ALIGNMENT 48 YS2-1b07.p1k chrm 731 779 62860 62908 F 49 100.00 1308 reject_low 7 ALIGNMENT 46 YS2-1b07.p1k chrm 731 816 69442 69527 F 86 86.05 1308 reject_low 6 ALIGNMENT 0 YS2-1b07.p1k chrm 775 917 9073 9072 F 143 0.00 1308 reject_low 3 ALIGNMENT 233 YS2-1b07.p1k chrm 35 782 1480 2144 F 748 87.17 1308 reject_low 2 ALIGNMENT 20 YS2-1b07.p1k chrm 1174 1238 2603 2667 F 65 78.46 1308 accept_chi 1 reject_low 2 ALIGNMENT 23 YS2-1b07.p1k chrm 557 602 62608 62653 F 46 93.48 1308 reject_low 6,7 ALIGNMENT 0 YS2-1b07.p1k chrm 62 730 9030 9029 F 669 0.00 1308 reject_low 3 ALIGNMENT 0 YS2-1b07.p1k chrm 1174 1173 2542 2602 F 0 0.00 1308 accept_chi 1 ALIGNMENT 0 YS2-1b07.p1k chrm 783 1173 2145 2602 F 391 0.00 1308 reject_low 2 ALIGNMENT 0 YS2-1b08.q1k chr02 62 110 333383 333382 F 49 0.00 1374 reject_low 1 ALIGNMENT 359 YS2-1b08.q1k chr02 111 540 333383 333810 F 430 95.12 1374 reject_low 1 ALIGNMENT 837 YS2-1b08.q1k chr04 28 1135 491810 492908 F 1108 93.32 1374 accept 0 ALIGNMENT 927 YS2-1b08.p1k chr04 1157 32 496883 498035 C 1126 95.38 1262 accept 0 ALIGNMENT 0 YS2-1b08.q1k chr02 541 737 333810 333809 F 197 0.00 1374 reject_low 1 ALIGNMENT 823 YS2-1b10.q1k chr04 1014 1 1434834 1435844 C 1014 94.77 1353 accept_chi 1 ALIGNMENT 885 YS2-1b10.p1k chr04 1023 30 672058 673059 C 994 97.28 1412 accept_chi 0 ALIGNMENT 186 YS2-1b12.q1k chr08 26 215 442542 442731 F 190 99.47 1359 reject_low 1 ALIGNMENT 991 YS2-1b12.p1k chr16 32 1160 380132 381263 F 1129 96.90 1276 accept 0 ALIGNMENT 0 YS2-1b12.q1k chr16 215 62 384483 384482 C 154 0.00 1359 accept 0 ALIGNMENT 0 YS2-1b12.q1k chr08 216 771 442731 442730 F 556 0.00 1359 reject_low 1 ALIGNMENT 705 YS2-1b12.q1k chr16 1102 216 383593 384482 C 887 94.70 1359 accept 0 ALIGNMENT 0 YS2-1b13.q1k chr12 591 646 1067098 1067093 F 56 0.00 1346 reject_low 9 ALIGNMENT 500 YS2-1b13.q1k chr12 64 590 1066572 1067097 F 527 98.67 1346 reject_low 9 ALIGNMENT 929 YS2-1b13.p1k chr16 33 1084 131 1195 F 1052 97.24 1355 reject_low 7 ALIGNMENT 0 YS2-1b13.q1k chr12 813 212 4010 4010 C 602 0.00 1346 reject_low 13 ALIGNMENT 918 YS2-1b13.p1k chr12 33 1117 334 1434 F 1085 96.22 1355 reject_low 13 ALIGNMENT 0 YS2-1b13.q1k chr02 813 212 4211 4211 C 602 0.00 1346 reject_low 17 ALIGNMENT 44 YS2-1b13.q1k chr08 870 814 3685 3741 C 57 92.98 1346 reject_low 14 ALIGNMENT 167 YS2-1b13.q1k chr12 211 31 4011 4190 C 181 98.34 1346 reject_low 13 ALIGNMENT 44 YS2-1b13.q1k chr02 870 814 4154 4210 C 57 92.98 1346 reject_low 17 ALIGNMENT 0 YS2-1b13.q1k chr12 682 696 1067129 1067124 F 15 0.00 1346 reject_low 9 ALIGNMENT 879 YS2-1b13.q1k chr12 31 1107 1073123 1074200 F 1077 94.52 1346 reject_low 4 ALIGNMENT 164 YS2-1b13.q1k chr08 31 211 558440 558619 F 181 97.79 1346 reject_low 11 ALIGNMENT 950 YS2-1b13.p1k chr15 1084 33 1089941 1091008 C 1052 97.81 1355 reject_low 3 ALIGNMENT 888 YS2-1b13.q1k chr14 1238 31 3920 5140 C 1208 92.14 1346 ambiguous_tel 1 ALIGNMENT 44 YS2-1b13.q1k chr12 870 814 9488 9544 C 57 92.98 1346 reject_low 15 ALIGNMENT 167 YS2-1b13.q1k chr13 211 31 3887 4066 C 181 98.34 1346 reject_low 16 ALIGNMENT 926 YS2-1b13.p1k chr05 33 1084 115 1182 F 1052 97.05 1355 reject_low 10 ALIGNMENT 497 YS2-1b13.p1k chr06 496 1084 2 605 F 589 96.10 1355 reject_low 18 ALIGNMENT 950 YS2-1b13.p1k chr12 1084 33 1076977 1078044 C 1052 97.81 1355 reject_low 4 ALIGNMENT 941 YS2-1b13.p1k chr12 33 1084 5971 7038 F 1052 97.53 1355 reject_low 15 ALIGNMENT 873 YS2-1b13.q1k chr09 1137 31 4420 5529 C 1107 93.68 1346 reject_low 5 ALIGNMENT 938 YS2-1b13.p1k chr02 33 1084 131 1198 F 1052 97.43 1355 reject_low 17 ALIGNMENT 928 YS2-1b13.p1k chr07 1084 33 1089682 1090746 C 1052 97.24 1355 ambiguous_tel 0 ALIGNMENT 167 YS2-1b13.q1k chr16 31 211 943987 944166 F 181 98.34 1346 reject_low 12 ALIGNMENT 928 YS2-1b13.p1k chr16 1084 33 946782 947846 C 1052 97.24 1355 reject_low 12 ALIGNMENT 165 YS2-1b13.q1k chr06 209 31 3050 3227 C 179 98.32 1346 reject_low 18 ALIGNMENT 26 YS2-1b13.q1k chr12 647 681 1067094 1067128 F 35 91.43 1346 reject_low 9 ALIGNMENT 950 YS2-1b13.p1k chr12 1084 33 1070314 1071381 C 1052 97.81 1355 reject_low 9 ALIGNMENT 893 YS2-1b13.q1k chr15 31 1132 1086087 1087191 F 1102 94.37 1346 reject_low 3 ALIGNMENT 0 YS2-1b13.q1k chr13 813 212 3886 3886 C 602 0.00 1346 reject_low 16 ALIGNMENT 0 YS2-1b13.q1k chr08 813 212 3742 3742 C 602 0.00 1346 reject_low 14 ALIGNMENT 164 YS2-1b13.q1k chr02 211 31 4212 4391 C 181 97.79 1346 reject_low 17 ALIGNMENT 0 YS2-1b13.q1k chr05 696 682 4559 4554 C 15 0.00 1346 reject_low 10 ALIGNMENT 0 YS2-1b13.q1k chr06 813 210 3047 3049 C 604 0.00 1346 reject_low 18 ALIGNMENT 928 YS2-1b13.p1k chr05 1084 33 575605 576669 C 1052 97.24 1355 reject_low 8 ALIGNMENT 926 YS2-1b13.p1k chr14 33 1084 222 1286 F 1052 97.15 1355 ambiguous_tel 1 ALIGNMENT 950 YS2-1b13.p1k chr04 1084 33 1530776 1531843 C 1052 97.81 1355 reject_low 2 ALIGNMENT 44 YS2-1b13.q1k chr06 870 814 2990 3046 C 57 92.98 1346 reject_low 18 ALIGNMENT 883 YS2-1b13.q1k chr16 1137 31 3941 5049 C 1107 93.95 1346 reject_low 7 ALIGNMENT 44 YS2-1b13.q1k chr12 870 814 3953 4009 C 57 92.98 1346 reject_low 13 ALIGNMENT 884 YS2-1b13.q1k chr05 31 1132 571751 572855 F 1102 94.10 1346 reject_low 8 ALIGNMENT 249 YS2-1b13.q1k chr05 1137 697 4115 4558 C 441 86.85 1346 reject_low 10 ALIGNMENT 0 YS2-1b13.q1k chr05 646 591 4590 4585 C 56 0.00 1346 reject_low 10 ALIGNMENT 44 YS2-1b13.q1k chr08 814 870 558621 558677 F 57 92.98 1346 reject_low 11 ALIGNMENT 500 YS2-1b13.q1k chr05 590 64 4586 5111 C 527 98.67 1346 reject_low 10 ALIGNMENT 0 YS2-1b13.p1k chr06 62 495 2 1 F 434 0.00 1355 reject_low 18 ALIGNMENT 44 YS2-1b13.q1k chr13 870 814 3829 3885 C 57 92.98 1346 reject_low 16 ALIGNMENT 44 YS2-1b13.q1k chr16 814 870 944168 944224 F 57 92.98 1346 reject_low 12 ALIGNMENT 941 YS2-1b13.p1k chr08 1084 33 561129 562196 C 1052 97.53 1355 reject_low 11 ALIGNMENT 251 YS2-1b13.q1k chr12 697 1238 1067125 1067680 F 542 84.13 1346 reject_low 9 ALIGNMENT 167 YS2-1b13.q1k chr12 211 31 9546 9725 C 181 98.34 1346 reject_low 15 ALIGNMENT 883 YS2-1b13.p1k chr10 33 1104 321 1405 F 1072 95.52 1355 reject_low 6 ALIGNMENT 883 YS2-1b13.p1k chr09 33 1104 338 1422 F 1072 95.52 1355 reject_low 5 ALIGNMENT 26 YS2-1b13.q1k chr05 681 647 4555 4589 C 35 91.43 1346 reject_low 10 ALIGNMENT 873 YS2-1b13.q1k chr10 1137 31 4403 5512 C 1107 93.68 1346 reject_low 6 ALIGNMENT 0 YS2-1b13.q1k chr12 813 212 9545 9545 C 602 0.00 1346 reject_low 15 ALIGNMENT 0 YS2-1b13.q1k chr08 212 813 558620 558620 F 602 0.00 1346 reject_low 11 ALIGNMENT 164 YS2-1b13.q1k chr08 211 31 3743 3922 C 181 97.79 1346 reject_low 14 ALIGNMENT 888 YS2-1b13.q1k chr07 31 1238 1085828 1087048 F 1208 92.22 1346 ambiguous_tel 0 ALIGNMENT 0 YS2-1b13.q1k chr16 212 813 944167 944167 F 602 0.00 1346 reject_low 12 ALIGNMENT 941 YS2-1b13.p1k chr13 33 1084 312 1379 F 1052 97.53 1355 reject_low 16 ALIGNMENT 944 YS2-1b13.p1k chr08 33 1084 296 1363 F 1052 97.62 1355 reject_low 14 ALIGNMENT 893 YS2-1b13.q1k chr04 31 1132 1526922 1528026 F 1102 94.37 1346 reject_low 2 ALIGNMENT 939 YS2-1b14.p1k chr14 30 1158 132795 133936 F 1129 96.10 1328 accept 0 ALIGNMENT 903 YS2-1b14.q1k chr14 1090 32 133823 134867 C 1059 96.79 1392 accept 0 ALIGNMENT 596 YS2-1b15.q1k chr12 53 822 511846 512603 F 770 94.16 1540 accept 0 ALIGNMENT 831 YS2-1b15.p1k chr12 1091 31 517064 518112 C 1061 94.72 1272 accept 0 ALIGNMENT 1006 YS2-1b16.p1k chr12 34 1226 759506 760712 F 1193 96.06 1230 accept 0 ALIGNMENT 880 YS2-1b16.q1k chr12 1077 26 761166 762217 C 1052 95.91 1306 accept 0 ALIGNMENT 1008 YS2-1b19.p1k chr08 1213 29 342030 343221 C 1185 95.19 1292 accept 0 ALIGNMENT 864 YS2-1b19.q1k chr08 33 1189 338556 339713 F 1157 93.00 1345 accept 0 ALIGNMENT 760 YS2-1b20.q1k chr07 3 910 122947 123848 F 908 95.26 1315 accept 0 ALIGNMENT 891 YS2-1b20.p1k chr07 1035 35 127655 128668 C 1001 97.60 1231 accept 0 ALIGNMENT 866 YS2-1b21.q1k chr12 24 1191 915018 916179 F 1168 92.81 1368 accept 0 ALIGNMENT 1023 YS2-1b21.p1k chr12 1251 36 916636 917859 C 1216 95.48 1255 accept 0 ALIGNMENT 659 YS2-1b23.p1k chr03 760 28 187221 187954 C 733 98.50 1305 accept 0 ALIGNMENT 900 YS2-1b23.q1k chr03 29 1108 186629 187699 F 1080 95.93 1270 accept 0 ALIGNMENT 0 YS2-1b24.p1k chr13 745 762 864070 864069 F 18 0.00 762 accept_chi 0 ALIGNMENT 536 YS2-1b24.q1k chr13 751 45 863372 864070 C 707 93.35 1406 accept_chi 1 ALIGNMENT 637 YS2-1b24.p1k chr13 75 744 863402 864070 F 670 99.40 762 accept_chi 0 ALIGNMENT 687 YS2-1c01.q1k chr08 963 6 405195 406139 C 958 92.90 1295 accept 0 ALIGNMENT 1003 YS2-1c01.p1k chr08 34 1301 401620 402895 F 1268 94.24 1323 accept 0 ALIGNMENT 972 YS2-1c02.p1k chr12 33 1127 463825 464934 F 1095 97.17 1286 accept 1 ALIGNMENT 768 YS2-1c02.q1k chr12 914 29 464058 464936 C 886 96.84 1416 accept 1 ALIGNMENT 768 YS2-1c02.q1k chr12 914 29 454921 455799 C 886 96.84 1416 accept 0 ALIGNMENT 972 YS2-1c02.p1k chr12 33 1127 454688 455797 F 1095 97.17 1286 accept 0 ALIGNMENT 220 YS2-1c04.q1k vc_2 1 293 2322 2613 F 293 92.49 785 reject_vc 5 ALIGNMENT 48 YS2-1c04.q1k vc_7 54 3 6360 6411 C 52 98.08 785|1,0 reject_vc 7 ALIGNMENT 386 YS2-1c04.p1k chr14 34 426 508820 509212 F 393 99.75 443 accept 0 ALIGNMENT 0 YS2-1c04.p1k chr14 427 443 509212 509211 F 17 0.00 443 accept 0 ALIGNMENT 225 YS2-1c04.q1k vc_7 374 1 2206 2569 C 374 89.04 785 reject_vc 2 ALIGNMENT 220 YS2-1c04.q1k vc_3 1 293 2689 2980 F 293 92.49 785 reject_vc 6 ALIGNMENT 220 YS2-1c04.q1k vc_1 1 293 2689 2980 F 293 92.49 785 reject_vc 4 ALIGNMENT 226 YS2-1c04.q1k vc_5 1 374 2556 2919 F 374 89.04 785 reject_vc 1 ALIGNMENT 169 YS2-1c04.q1k vc_7 293 53 4933 5172 C 241 90.87 785|0,1 reject_vc 7 ALIGNMENT 0 YS2-1c04.q1k vc_7 53 54 5172 6360 C 0 0.00 785 reject_vc 7 ALIGNMENT 218 YS2-1c04.q1k vc_4 374 1 5289 5654 C 374 88.50 785 reject_vc 3 ALIGNMENT 417 YS2-1c05.p1k chr13 31 497 274611 275077 F 467 98.07 516 accept 0 ALIGNMENT 0 YS2-1c05.p1k chr13 498 516 275077 275076 F 19 0.00 516 accept 0 ALIGNMENT 307 YS2-1c05.q1k chr13 485 49 274618 275055 C 437 91.99 1466 accept 0 ALIGNMENT 815 YS2-1c06.q1k chr12 1038 26 466721 467726 C 1013 94.27 1420 accept 0,1 ALIGNMENT 1014 YS2-1c06.p1k chr12 30 1154 465381 466522 F 1125 97.24 1279 accept 1 ALIGNMENT 809 YS2-1c06.q1k chr12 1014 26 457608 458589 C 989 94.74 1420 reject_low 2 ALIGNMENT 1014 YS2-1c06.p1k chr12 30 1154 456244 457385 F 1125 97.24 1279 accept 0 ALIGNMENT 974 YS2-1c07.p1k chr11 35 1198 557566 558743 F 1164 95.62 1296 accept_chi 0 ALIGNMENT 878 YS2-1c07.q1k chr04 1085 34 70664 71721 C 1052 95.53 1383 accept_chi 1 ALIGNMENT 847 YS2-1c08.q1k chr13 30 1064 87823 88857 F 1035 95.94 1379 accept_chi 1 ALIGNMENT 964 YS2-1c08.p1k chr02 29 1103 663202 664284 F 1075 97.12 1263 accept_chi 0 ALIGNMENT 779 YS2-1c09.q1k chr15 1097 28 388658 389711 C 1070 93.08 1400 reject_bad_break 0 ALIGNMENT 0 YS2-1c09.p1k chr15 842 963 385218 385207 F 122 0.00 1233 reject_bad_break 0 ALIGNMENT 122 YS2-1c09.p1k chr15 964 1172 385208 385415 F 209 88.52 1233 reject_bad_break 0 ALIGNMENT 674 YS2-1c09.p1k chr15 34 841 384409 385217 F 808 95.30 1233 reject_bad_break 0 ALIGNMENT 272 YS2-1c10.q1k vc_2 1 304 2322 2623 F 304 97.37 1000 reject_vc 5 ALIGNMENT 39 YS2-1c10.q1k vc_4 304 244 48 107 C 61 91.80 1000 reject_low 8 ALIGNMENT 0 YS2-1c10.p1k chr08 225 243 239050 239049 F 19 0.00 243 accept 0 ALIGNMENT 0 YS2-1c10.q1k vc_4 62 243 1553 1552 F 182 0.00 1000 reject_low 9 ALIGNMENT 315 YS2-1c10.q1k vc_5 1 534 2556 3073 F 534 88.76 1000 reject_vc 1 ALIGNMENT 178 YS2-1c10.p1k chr08 28 224 238853 239050 F 197 98.98 243 accept 0 ALIGNMENT 51 YS2-1c10.q1k vc_7 54 3 6360 6411 C 52 100.00 1000|1,0 reject_vc 7 ALIGNMENT 302 YS2-1c10.q1k vc_4 406 1 5251 5654 C 406 92.86 1000 reject_vc 3 ALIGNMENT 0 YS2-1c10.q1k vc_4 243 62 6335 6334 C 182 0.00 1000 reject_low 10 ALIGNMENT 0 YS2-1c10.q1k vc_4 243 62 108 107 C 182 0.00 1000 reject_low 8 ALIGNMENT 217 YS2-1c10.q1k vc_7 304 53 4923 5172 C 252 96.43 1000|0,1 reject_vc 7 ALIGNMENT 272 YS2-1c10.q1k vc_1 1 304 2689 2990 F 304 97.37 1000 reject_vc 4 ALIGNMENT 39 YS2-1c10.q1k vc_4 244 304 1553 1612 F 61 91.80 1000 reject_low 9 ALIGNMENT 39 YS2-1c10.q1k vc_4 304 244 6275 6334 C 61 91.80 1000 reject_low 10 ALIGNMENT 272 YS2-1c10.q1k vc_3 1 304 2689 2990 F 304 97.37 1000 reject_vc 6 ALIGNMENT 0 YS2-1c10.q1k vc_7 53 54 5172 6360 C 0 0.00 1000 reject_vc 7 ALIGNMENT 309 YS2-1c10.q1k vc_7 406 1 2168 2569 C 406 93.35 1000 reject_vc 2 ALIGNMENT 865 YS2-1c12.q1k chr12 1146 26 569723 570828 C 1121 94.20 1443 accept 0 ALIGNMENT 988 YS2-1c12.p1k chr12 34 1186 564867 566031 F 1153 96.01 1246 accept 0 ALIGNMENT 934 YS2-1c13.p1k chr12 33 1128 455226 456325 F 1096 95.99 1216 accept 0 ALIGNMENT 773 YS2-1c13.q1k chr12 1057 30 460451 461482 C 1028 93.39 1411 accept 0 ALIGNMENT 530 YS2-1c13.q1k chr12 588 30 489754 490313 C 559 98.57 1411 reject_low 3 ALIGNMENT 0 YS2-1c13.q1k chr12 754 589 489755 489754 C 166 0.00 1411 reject_low 3 ALIGNMENT 934 YS2-1c13.p1k chr12 33 1128 464363 465462 F 1096 95.99 1216 reject_low 1 ALIGNMENT 760 YS2-1c13.q1k chr12 947 30 451420 452345 C 918 95.53 1411 reject_low 2 ALIGNMENT 959 YS2-1c14.p1k chr02 1137 36 556632 557749 C 1102 96.91 1197 accept 0 ALIGNMENT 860 YS2-1c14.q1k chr02 27 1060 553168 554196 F 1034 95.94 1424 accept 0 ALIGNMENT 59 YS2-1c15.q1k vc_7 421 307 4586 4699 C 115 85.22 956 reject_vc 7 ALIGNMENT 182 YS2-1c15.p1k chr01 33 225 41122 41315 F 193 98.45 244 accept 0 ALIGNMENT 51 YS2-1c15.q1k vc_7 54 3 6360 6411 C 52 100.00 956|1,0 reject_vc 7 ALIGNMENT 0 YS2-1c15.q1k vc_4 239 62 6340 6339 C 178 0.00 956 reject_vc 10 ALIGNMENT 0 YS2-1c15.q1k vc_4 239 62 113 112 C 178 0.00 956 reject_vc 9 ALIGNMENT 272 YS2-1c15.q1k vc_2 1 305 2322 2624 F 305 97.38 956 reject_vc 5 ALIGNMENT 47 YS2-1c15.q1k vc_4 240 306 1548 1614 F 67 92.54 956 reject_vc 8 ALIGNMENT 272 YS2-1c15.q1k vc_3 1 305 2689 2991 F 305 97.38 956 reject_vc 6 ALIGNMENT 354 YS2-1c15.q1k vc_7 494 1 2080 2569 C 494 91.90 956 reject_vc 2 ALIGNMENT 74 YS2-1c15.q1k vc_4 321 494 1889 2061 F 174 83.33 956 reject_vc 8 ALIGNMENT 272 YS2-1c15.q1k vc_1 1 305 2689 2991 F 305 97.38 956 reject_vc 4 ALIGNMENT 0 YS2-1c15.q1k vc_7 53 54 5172 6360 C 0 0.00 956 reject_vc 7 ALIGNMENT 0 YS2-1c15.p1k chr01 226 244 41315 41314 F 19 0.00 244 accept 0 ALIGNMENT 0 YS2-1c15.q1k vc_4 62 239 1548 1547 F 178 0.00 956 reject_vc 8 ALIGNMENT 354 YS2-1c15.q1k vc_5 1 494 2556 3045 F 494 91.90 956 reject_vc 1 ALIGNMENT 47 YS2-1c15.q1k vc_4 306 240 46 112 C 67 92.54 956 reject_vc 9 ALIGNMENT 0 YS2-1c15.q1k vc_7 306 306 4700 4921 C 1 0.00 956 reject_vc 7 ALIGNMENT 47 YS2-1c15.q1k vc_4 306 240 6273 6339 C 67 92.54 956 reject_vc 10 ALIGNMENT 218 YS2-1c15.q1k vc_7 305 53 4922 5172 C 253 96.44 956|0,1 reject_vc 7 ALIGNMENT 0 YS2-1c15.q1k vc_4 307 320 1615 1888 F 14 0.00 956 reject_vc 8 ALIGNMENT 325 YS2-1c15.q1k vc_4 421 1 5235 5654 C 421 93.59 956 reject_vc 3 ALIGNMENT 1034 YS2-1c16.p1k chr12 35 1243 658099 659313 F 1209 95.95 1330 accept 0 ALIGNMENT 805 YS2-1c16.q1k chr12 968 30 661888 662816 C 939 96.49 1430 accept 0 ALIGNMENT 627 YS2-1c17.q1k chr12 1021 31 457960 458887 C 991 91.52 1464 accept_chi 1 ALIGNMENT 932 YS2-1c17.p1k chr15 32 1105 254869 255960 F 1074 96.65 1295 accept_chi 0 ALIGNMENT 627 YS2-1c17.q1k chr12 1021 31 467097 468024 C 991 91.52 1464 accept_chi 2 ALIGNMENT 922 YS2-1c18.q1k chr04 33 1138 45972 47074 F 1106 95.75 1436 accept 0 ALIGNMENT 961 YS2-1c18.p1k chr04 1164 37 50106 51243 C 1128 96.90 1237 accept 0 ALIGNMENT 1005 YS2-1c21.p1k chr13 1202 30 38032 39207 C 1173 96.50 1230 accept_chi 0 ALIGNMENT 734 YS2-1c21.q1k chr04 876 31 925331 926172 C 846 96.93 1311 accept_chi 1 ALIGNMENT 29 YS2-1c22.q1k vc_4 334 362 5832 5860 F 29 100.00 1255 reject_low 13 ALIGNMENT 70 YS2-1c22.q1k vc_4 457 373 1451 1534 C 85 95.29 1255 reject_low 14 ALIGNMENT 197 YS2-1c22.q1k vc_1 373 700 2531 2854 F 328 88.41 1255 reject_low 8 ALIGNMENT 0 YS2-1c22.q1k vc_4 77 372 126 125 F 296 0.00 1255 reject_low 12 ALIGNMENT 0 YS2-1c22.q1k vc_4 372 77 5813 5812 C 296 0.00 1255 reject_low 11 ALIGNMENT 0 YS2-1c22.q1k vc_1 77 372 2531 2530 F 296 0.00 1255 reject_low 8 ALIGNMENT 197 YS2-1c22.q1k vc_2 373 700 2164 2487 F 328 88.41 1255 reject_low 9 ALIGNMENT 29 YS2-1c22.q1k vc_2 362 334 2116 2144 C 29 100.00 1255 reject_low 16 ALIGNMENT 29 YS2-1c22.q1k vc_3 362 334 2483 2511 C 29 100.00 1255 reject_low 17 ALIGNMENT 0 YS2-1c22.q1k vc_4 77 333 5832 5831 F 257 0.00 1255 reject_low 13 ALIGNMENT 28 YS2-1c22.q1k vc_5 362 335 9 36 C 28 100.00 1255 reject_low 18 ALIGNMENT 235 YS2-1c22.p1k vc_6 1 381 3712 4090 F 381 89.24 520 reject_low 6 ALIGNMENT 0 YS2-1c22.q1k vc_1 333 77 2512 2511 C 257 0.00 1255 reject_low 15 ALIGNMENT 0 YS2-1c22.q1k vc_3 77 372 2531 2530 F 296 0.00 1255 reject_low 10 ALIGNMENT 128 YS2-1c22.q1k vc_4 373 536 6353 6514 F 164 93.90 1255 reject_low 13 ALIGNMENT 190 YS2-1c22.q1k vc_4 700 373 5487 5812 C 328 87.50 1255 reject_low 11 ALIGNMENT 0 YS2-1c22.q1k vc_2 77 372 2164 2163 F 296 0.00 1255 reject_low 9 ALIGNMENT 235 YS2-1c22.p1k vc_2 381 1 1371 1749 C 381 88.98 520 reject_low 4 ALIGNMENT 0 YS2-1c22.q1k vc_5 77 372 2398 2397 F 296 0.00 1255 reject_low 1 ALIGNMENT 0 YS2-1c22.q1k vc_7 372 77 2728 2727 C 296 0.00 1255 reject_low 2 ALIGNMENT 0 YS2-1c22.q1k vc_4 372 77 1535 1534 C 296 0.00 1255 reject_low 14 ALIGNMENT 235 YS2-1c22.p1k vc_3 381 1 1371 1749 C 381 88.98 520 reject_low 5 ALIGNMENT 29 YS2-1c22.q1k vc_1 362 334 2483 2511 C 29 100.00 1255 reject_low 15 ALIGNMENT 235 YS2-1c22.p1k vc_1 381 1 1371 1749 C 381 88.98 520 reject_low 3 ALIGNMENT 197 YS2-1c22.q1k vc_7 700 373 2404 2727 C 328 88.11 1255 reject_low 2 ALIGNMENT 27 YS2-1c22.q1k vc_7 336 362 13525 13551 F 27 100.00 1255 reject_low 20 ALIGNMENT 0 YS2-1c22.q1k vc_5 334 77 37 36 C 258 0.00 1255 reject_low 18 ALIGNMENT 0 YS2-1c22.q1k vc_3 333 77 2512 2511 C 257 0.00 1255 reject_low 17 ALIGNMENT 229 YS2-1c22.p1k vc_7 1 381 13918 14296 F 381 88.71 520 reject_low 7 ALIGNMENT 229 YS2-1c22.p1k vc_7 1 381 456 834 F 381 88.71 520 reject_low 2 ALIGNMENT 0 YS2-1c22.q1k vc_5 334 77 5064 5063 C 258 0.00 1255 reject_low 19 ALIGNMENT 0 YS2-1c22.q1k vc_4 363 372 5861 6352 F 10 0.00 1255 reject_low 13 ALIGNMENT 197 YS2-1c22.q1k vc_5 373 700 2398 2721 F 328 88.41 1255 reject_low 1 ALIGNMENT 128 YS2-1c22.q1k vc_4 373 536 126 287 F 164 93.90 1255 reject_low 12 ALIGNMENT 197 YS2-1c22.q1k vc_3 373 700 2531 2854 F 328 88.41 1255 reject_low 10 ALIGNMENT 235 YS2-1c22.p1k vc_5 381 1 4291 4669 C 381 88.98 520 reject_low 1 ALIGNMENT 0 YS2-1c22.q1k vc_2 333 77 2145 2144 C 257 0.00 1255 reject_low 16 ALIGNMENT 0 YS2-1c22.q1k vc_7 77 335 13525 13524 F 259 0.00 1255 reject_low 20 ALIGNMENT 254 YS2-1c22.q1k chr15 333 23 896118 896427 C 311 94.53 1255 accept 0 ALIGNMENT 28 YS2-1c22.q1k vc_5 362 335 5036 5063 C 28 100.00 1255 reject_low 19 ALIGNMENT 973 YS2-1c23.p1k chr15 1177 30 346858 348001 C 1148 95.73 1254 accept 0 ALIGNMENT 0 YS2-1c23.q1k chr15 62 514 346516 346515 F 453 0.00 1286 reject_low 4 ALIGNMENT 0 YS2-1c23.q1k chr05 736 62 175540 175539 C 675 0.00 1286 reject_low 2 ALIGNMENT 0 YS2-1c23.q1k chr15 670 376 345727 345726 C 295 0.00 1286 reject_low 3 ALIGNMENT 0 YS2-1c23.q1k chr15 654 670 346540 346539 F 17 0.00 1286 accept 0 ALIGNMENT 20 YS2-1c23.p1k chr15 548 567 347464 347483 F 20 100.00 1254 reject_low 6 ALIGNMENT 587 YS2-1c23.q1k chr15 31 653 345919 346540 F 623 98.88 1286 accept 0 ALIGNMENT 0 YS2-1c23.q1k chr15 621 670 346459 346458 F 50 0.00 1286 reject_low 7 ALIGNMENT 0 YS2-1c23.q1k chr15 585 670 346585 346584 F 86 0.00 1286 reject_low 4 ALIGNMENT 310 YS2-1c23.q1k chr15 494 1001 346414 346915 F 508 88.58 1286 reject_low 1 ALIGNMENT 0 YS2-1c23.p1k chr15 568 827 347483 347482 F 260 0.00 1254 reject_low 6 ALIGNMENT 97 YS2-1c23.q1k chr05 892 737 175385 175539 C 156 88.46 1286 reject_low 2 ALIGNMENT 0 YS2-1c23.q1k chr15 335 62 345766 345765 C 274 0.00 1286 reject_low 3 ALIGNMENT 32 YS2-1c23.q1k chr15 375 336 345726 345765 C 40 95.00 1286 reject_low 3 ALIGNMENT 37 YS2-1c23.q1k chr15 515 584 346516 346585 F 70 88.57 1286 reject_low 4 ALIGNMENT 0 YS2-1c23.q1k chr15 62 493 346414 346413 F 432 0.00 1286 reject_low 1 ALIGNMENT 34 YS2-1c23.q1k chr15 599 665 346405 346471 F 67 86.57 1286 reject_low 5 ALIGNMENT 0 YS2-1c23.q1k chr15 62 577 346417 346416 F 516 0.00 1286 reject_low 7 ALIGNMENT 0 YS2-1c23.p1k chr15 62 547 347464 347463 F 486 0.00 1254 reject_low 6 ALIGNMENT 26 YS2-1c23.q1k chr15 578 620 346417 346459 F 43 90.70 1286 reject_low 7 ALIGNMENT 0 YS2-1c23.q1k chr15 62 598 346405 346404 F 537 0.00 1286 reject_low 5 ALIGNMENT 696 YS2-1c24.q1k chr10 847 18 285834 286658 C 830 95.78 1442 accept 0 ALIGNMENT 1063 YS2-1c24.p1k chr10 31 1205 281473 282652 F 1175 97.28 1223 accept 0 ALIGNMENT 0 YS2-1d01.p1k chr04 916 898 440601 440600 C 19 0.00 916 reject_bad_break 0 ALIGNMENT 0 YS2-1d01.p1k chr04 124 125 441379 441357 C 0 0.00 916 reject_bad_break 0 ALIGNMENT 715 YS2-1d01.p1k chr04 897 125 440600 441378 C 773 98.71 916 reject_bad_break 0 ALIGNMENT 46 YS2-1d01.p1k chr04 124 62 441358 441420 C 63 98.41 916 reject_bad_break 0 reject_low 1 ALIGNMENT 0 YS2-1d01.p1k chr04 916 125 441359 441358 C 792 0.00 916 reject_low 1 ALIGNMENT 659 YS2-1d01.q1k chr04 26 743 440600 441316 F 718 98.33 1475 reject_low 1 ALIGNMENT 617 YS2-1d02.q1k chr07 41 803 927598 928359 F 763 94.76 1384 accept 0 ALIGNMENT 123 YS2-1d02.p1k chr07 1057 909 931545 931693 C 149 94.63 1300|0,4 accept 0 ALIGNMENT 0 YS2-1d02.p1k chr07 912 913 931690 932026 C 0 0.00 1300 accept 0 ALIGNMENT 832 YS2-1d02.p1k chr07 916 36 932023 932903 C 881 99.66 1300|4,0 accept 0 ALIGNMENT 884 YS2-1d04.q1k chr16 1080 33 279986 281027 C 1048 95.80 1355 accept 0 ALIGNMENT 972 YS2-1d04.p1k chr16 30 1187 276781 277953 F 1158 96.55 1249 accept 0 ALIGNMENT 514 YS2-1d05.p1k chr14 42 1052 16215 17225 F 1011 83.98 1316 reject_low 1 ALIGNMENT 306 YS2-1d05.p1k chr03 930 155 314020 314796 C 776 80.41 1316 reject_low 4 ALIGNMENT 0 YS2-1d05.p1k chr04 837 907 18466 18465 F 71 0.00 1316 reject_low 3 ALIGNMENT 484 YS2-1d05.p1k chr06 42 1057 14399 15413 F 1016 82.87 1316 reject_low 2 ALIGNMENT 0 YS2-1d05.p1k chr03 154 62 314797 314796 C 93 0.00 1316 reject_low 4 ALIGNMENT 456 YS2-1d05.p1k chr04 42 836 17671 18466 F 795 86.42 1316 reject_low 3 ALIGNMENT 895 YS2-1d05.q1k chr10 35 1121 725039 726133 F 1087 95.77 1390 accept 0 ALIGNMENT 1018 YS2-1d05.p1k chr10 1306 36 726803 728095 C 1271 94.34 1316 accept 0 ALIGNMENT 649 YS2-1d06.p1k chr16 712 32 929587 930268 C 681 99.71 1339 accept 0 ALIGNMENT 0 YS2-1d06.p1k chrm 862 62 28147 28146 C 801 0.00 1339 reject_low 1 ALIGNMENT 28 YS2-1d06.p1k chrm 1124 863 27893 28146 C 262 82.82 1339 reject_low 1 ALIGNMENT 0 YS2-1d06.p1k chr16 811 713 929588 929587 C 99 0.00 1339 accept 0 ALIGNMENT 0 YS2-1d06.p1k chr11 710 62 648879 648878 C 649 0.00 1339 reject_low 2 ALIGNMENT 145 YS2-1d06.p1k chr11 856 711 648733 648878 C 146 100.00 1339 reject_low 2 ALIGNMENT 335 YS2-1d06.q1k chrm 28 679 26345 26978 F 652 90.18 1478 reject_low 1 ALIGNMENT 777 YS2-1d09.q1k chr15 1069 29 388688 389711 C 1041 93.56 1426 reject_bad_break 0 ALIGNMENT 0 YS2-1d09.p1k chr15 842 963 385219 385210 F 122 0.00 1218 reject_bad_break 0 ALIGNMENT 670 YS2-1d09.p1k chr15 34 841 384409 385218 F 808 95.17 1218 reject_bad_break 0 ALIGNMENT 99 YS2-1d09.p1k chr15 964 1141 385211 385402 F 178 88.20 1218 reject_bad_break 0 ALIGNMENT 888 YS2-1d10.q1k chr16 24 1067 420360 421414 F 1044 96.65 1324 accept 0 ALIGNMENT 983 YS2-1d10.p1k chr16 1194 38 425214 426366 C 1157 96.02 1271 accept 0 ALIGNMENT 923 YS2-1d11.p1k chr11 1168 37 58602 59741 C 1132 94.88 1313 accept 0 ALIGNMENT 891 YS2-1d11.q1k chr11 28 1122 55003 56091 F 1095 95.25 1413 accept 0 ALIGNMENT 878 YS2-1d12.q1k chr15 29 1144 86577 87682 F 1116 95.25 1451 accept 0 ALIGNMENT 972 YS2-1d12.p1k chr15 1214 36 89960 91135 C 1179 94.83 1336 accept 0 ALIGNMENT 0 YS2-1d13.q1k chr05 759 508 138337 138336 C 252 0.00 1397 reject_low 18 ALIGNMENT 88 YS2-1d13.q1k chr16 508 316 844523 844724 C 193 84.97 1397 reject_low 16 ALIGNMENT 25 YS2-1d13.q1k chr07 361 315 328163 328209 C 47 87.23 1397 reject_low 30 ALIGNMENT 0 YS2-1d13.q1k chr07 62 354 535580 535579 F 293 0.00 1397 reject_low 27 ALIGNMENT 0 YS2-1d13.q1k chr16 62 299 810230 810229 F 238 0.00 1397 reject_low 22 ALIGNMENT 0 YS2-1d13.q1k chr14 509 759 96826 96825 F 251 0.00 1397 reject_low 2 ALIGNMENT 0 YS2-1d13.q1k chr03 314 62 149788 149787 C 253 0.00 1397 reject_low 1 ALIGNMENT 0 YS2-1d13.q1k chr03 759 620 149476 149475 C 140 0.00 1397 reject_low 1 ALIGNMENT 73 YS2-1d13.q1k chr09 300 463 197141 197307 F 164 84.76 1397 reject_low 29 ALIGNMENT 0 YS2-1d13.q1k chr04 759 509 1095878 1095877 C 251 0.00 1397 reject_low 14 ALIGNMENT 0 YS2-1d13.q1k chr07 540 529 327982 328002 C 12 0.00 1397 reject_low 30 ALIGNMENT 0 YS2-1d13.q1k chr16 509 759 850847 850846 F 251 0.00 1397 reject_low 12 ALIGNMENT 0 YS2-1d13.q1k chr05 298 62 176853 176852 C 237 0.00 1397 reject_low 23 ALIGNMENT 44 YS2-1d13.q1k chr05 428 299 176722 176852 C 130 82.31 1397 reject_low 23 ALIGNMENT 104 YS2-1d13.q1k chr07 508 316 535330 535525 C 193 87.56 1397 reject_low 5 ALIGNMENT 0 YS2-1d13.q1k chr04 759 509 1175424 1175423 C 251 0.00 1397 reject_low 13 ALIGNMENT 77 YS2-1d13.q1k chr07 528 372 328003 328162 C 157 86.62 1397 reject_low 30 ALIGNMENT 0 YS2-1d13.q1k chr03 441 62 151701 151700 C 380 0.00 1397 reject_low 25 ALIGNMENT 0 YS2-1d13.q1k chr16 529 759 810464 810463 F 231 0.00 1397 reject_low 22 ALIGNMENT 0 YS2-1d13.q1k chr16 315 62 844725 844724 C 254 0.00 1397 reject_low 16 ALIGNMENT 94 YS2-1d13.q1k chr07 508 316 876072 876263 C 193 86.53 1397 reject_low 28 ALIGNMENT 27 YS2-1d13.q1k chr07 617 541 327905 327981 C 77 79.22 1397 reject_low 30 ALIGNMENT 44 YS2-1d13.q1k chr16 300 528 810230 810464 F 229 77.29 1397 reject_low 22 ALIGNMENT 0 YS2-1d13.q1k chr16 759 509 850115 850114 C 251 0.00 1397 reject_low 17 ALIGNMENT 0 YS2-1d13.q1k chr07 759 617 875956 875955 C 143 0.00 1397 reject_low 28 ALIGNMENT 0 YS2-1d13.q1k chr13 509 759 357220 357219 F 251 0.00 1397 reject_low 6 ALIGNMENT 88 YS2-1d13.q1k chr16 300 508 850630 850847 F 209 83.73 1397 reject_low 12 ALIGNMENT 0 YS2-1d13.q1k chr03 369 759 151515 151514 F 391 0.00 1397 reject_low 26 ALIGNMENT 27 YS2-1d13.q1k chr09 464 508 197325 197371 F 45 91.11 1397 reject_low 29 ALIGNMENT 0 YS2-1d13.q1k chr16 759 509 844524 844523 C 251 0.00 1397 reject_low 16 ALIGNMENT 28 YS2-1d13.q1k chr03 329 368 151476 151515 F 40 92.50 1397 reject_low 26 ALIGNMENT 0 YS2-1d13.q1k chr14 759 529 524825 524824 C 231 0.00 1397 reject_low 21 ALIGNMENT 93 YS2-1d13.q1k chr05 300 528 443398 443635 F 229 83.84 1397 reject_low 4 ALIGNMENT 91 YS2-1d13.q1k chr04 508 329 1175423 1175605 C 180 86.67 1397 reject_low 13 ALIGNMENT 88 YS2-1d13.q1k chr04 508 316 1095877 1096078 C 193 84.97 1397 reject_low 14 ALIGNMENT 0 YS2-1d13.q1k chr16 62 299 850630 850629 F 238 0.00 1397 reject_low 12 ALIGNMENT 22 YS2-1d13.q1k chr07 616 545 875955 876026 C 72 77.78 1397 reject_low 28 ALIGNMENT 81 YS2-1d13.q1k chr05 507 300 138336 138548 C 208 82.69 1397 reject_low 18 ALIGNMENT 0 YS2-1d13.q1k chr03 62 328 151476 151475 F 267 0.00 1397 reject_low 26 ALIGNMENT 0 YS2-1d13.q1k chr03 62 299 124136 124135 F 238 0.00 1397 reject_low 11 ALIGNMENT 0 YS2-1d13.q1k chr03 509 759 142962 142961 F 251 0.00 1397 reject_low 19 ALIGNMENT 0 YS2-1d13.q1k chr04 315 62 1096079 1096078 C 254 0.00 1397 reject_low 14 ALIGNMENT 0 YS2-1d13.q1k chr14 759 529 519259 519258 C 231 0.00 1397 reject_low 20 ALIGNMENT 0 YS2-1d13.q1k chr14 299 62 525059 525058 C 238 0.00 1397 reject_low 21 ALIGNMENT 0 YS2-1d13.q1k chr09 509 759 197371 197370 F 251 0.00 1397 reject_low 29 ALIGNMENT 87 YS2-1d13.q1k chr01 300 528 160244 160481 F 229 82.97 1397 reject_low 8 ALIGNMENT 48 YS2-1d13.q1k chr04 316 416 987165 987266 F 101 85.15 1397 reject_low 24 ALIGNMENT 0 YS2-1d13.q1k chr06 305 62 158674 158673 C 244 0.00 1397 reject_low 10 ALIGNMENT 0 YS2-1d13.q1k chr13 62 315 362607 362606 F 254 0.00 1397 reject_low 7 ALIGNMENT 32 YS2-1d13.q1k chr03 508 442 151632 151700 C 67 88.06 1397 reject_low 25 ALIGNMENT 0 YS2-1d13.q1k chr03 759 509 151633 151632 C 251 0.00 1397 reject_low 25 ALIGNMENT 0 YS2-1d13.q1k chr03 299 62 83031 83030 C 238 0.00 1397 reject_low 9 ALIGNMENT 47 YS2-1d13.q1k chr14 528 300 519258 519492 C 229 76.86 1397 reject_low 20 ALIGNMENT 104 YS2-1d13.q1k chr13 316 508 357025 357220 F 193 87.56 1397 reject_low 6 ALIGNMENT 0 YS2-1d13.q1k chr07 427 759 535652 535651 F 333 0.00 1397 reject_low 27 ALIGNMENT 88 YS2-1d13.q1k chr13 316 508 372717 372918 F 193 84.97 1397 reject_low 15 ALIGNMENT 892 YS2-1d13.p1k chr16 30 1123 771648 772762 F 1094 95.34 1214 accept 0 ALIGNMENT 0 YS2-1d13.q1k chr13 509 759 362802 362801 F 251 0.00 1397 reject_low 7 ALIGNMENT 0 YS2-1d13.q1k chr07 544 509 876027 876071 C 36 0.00 1397 reject_low 28 ALIGNMENT 21 YS2-1d13.q1k chr07 355 426 535580 535652 F 72 79.17 1397 reject_low 27 ALIGNMENT 66 YS2-1d13.q1k chr03 352 508 142803 142962 F 157 84.08 1397 reject_low 19 ALIGNMENT 0 YS2-1d13.q1k chr13 62 315 357025 357024 F 254 0.00 1397 reject_low 6 ALIGNMENT 821 YS2-1d13.q1k chr16 1014 32 775693 776677 C 983 96.13 1397 accept 0 ALIGNMENT 0 YS2-1d13.q1k chr05 299 62 138549 138548 C 238 0.00 1397 reject_low 18 ALIGNMENT 104 YS2-1d13.q1k chr13 316 508 362607 362802 F 193 87.56 1397 reject_low 7 ALIGNMENT 92 YS2-1d13.q1k chr03 300 508 124136 124347 F 209 84.21 1397 reject_low 11 ALIGNMENT 0 YS2-1d13.q1k chr14 509 759 102408 102407 F 251 0.00 1397 reject_low 3 ALIGNMENT 0 YS2-1d13.q1k chr07 315 62 535526 535525 C 254 0.00 1397 reject_low 5 ALIGNMENT 47 YS2-1d13.q1k chr14 528 300 524824 525058 C 229 76.86 1397 reject_low 21 ALIGNMENT 0 YS2-1d13.q1k chr05 529 759 443635 443634 F 231 0.00 1397 reject_low 4 ALIGNMENT 107 YS2-1d13.q1k chr14 300 508 96615 96826 F 209 86.60 1397 reject_low 2 ALIGNMENT 0 YS2-1d13.q1k chr04 62 315 987165 987164 F 254 0.00 1397 reject_low 24 ALIGNMENT 0 YS2-1d13.q1k chr16 315 62 850316 850315 C 254 0.00 1397 reject_low 17 ALIGNMENT 0 YS2-1d13.q1k chr14 299 62 519493 519492 C 238 0.00 1397 reject_low 20 ALIGNMENT 0 YS2-1d13.q1k chr14 62 299 102197 102196 F 238 0.00 1397 reject_low 3 ALIGNMENT 0 YS2-1d13.q1k chr05 759 429 176723 176722 C 331 0.00 1397 reject_low 23 ALIGNMENT 0 YS2-1d13.q1k chr03 759 529 82794 82793 C 231 0.00 1397 reject_low 9 ALIGNMENT 88 YS2-1d13.q1k chr16 508 316 850114 850315 C 193 84.97 1397 reject_low 17 ALIGNMENT 0 YS2-1d13.q1k chr09 464 463 197308 197324 F 0 0.00 1397 reject_low 29 ALIGNMENT 0 YS2-1d13.q1k chr07 371 362 328163 328162 C 10 0.00 1397 reject_low 30 ALIGNMENT 0 YS2-1d13.q1k chr04 328 62 1175606 1175605 C 267 0.00 1397 reject_low 13 ALIGNMENT 0 YS2-1d13.q1k chr03 509 759 124347 124346 F 251 0.00 1397 reject_low 11 ALIGNMENT 0 YS2-1d13.q1k chr01 529 759 160481 160480 F 231 0.00 1397 reject_low 8 ALIGNMENT 0 YS2-1d13.q1k chr06 759 529 158451 158450 C 231 0.00 1397 reject_low 10 ALIGNMENT 0 YS2-1d13.q1k chr05 62 299 443398 443397 F 238 0.00 1397 reject_low 4 ALIGNMENT 97 YS2-1d13.q1k chr03 619 315 149475 149787 C 305 80.98 1397 reject_low 1 ALIGNMENT 0 YS2-1d13.q1k chr09 62 299 197141 197140 F 238 0.00 1397 reject_low 29 ALIGNMENT 0 YS2-1d13.q1k chr03 62 351 142803 142802 F 290 0.00 1397 reject_low 19 ALIGNMENT 0 YS2-1d13.q1k chr07 314 62 328210 328209 C 253 0.00 1397 reject_low 30 ALIGNMENT 0 YS2-1d13.q1k chr04 417 759 987266 987265 F 343 0.00 1397 reject_low 24 ALIGNMENT 84 YS2-1d13.q1k chr06 528 306 158450 158673 C 223 82.51 1397 reject_low 10 ALIGNMENT 0 YS2-1d13.q1k chr07 315 62 876264 876263 C 254 0.00 1397 reject_low 28 ALIGNMENT 0 YS2-1d13.q1k chr13 509 759 372918 372917 F 251 0.00 1397 reject_low 15 ALIGNMENT 0 YS2-1d13.q1k chr01 62 299 160244 160243 F 238 0.00 1397 reject_low 8 ALIGNMENT 87 YS2-1d13.q1k chr03 528 300 82793 83030 C 229 82.97 1397 reject_low 9 ALIGNMENT 0 YS2-1d13.q1k chr13 62 315 372717 372716 F 254 0.00 1397 reject_low 15 ALIGNMENT 0 YS2-1d13.q1k chr07 759 509 535331 535330 C 251 0.00 1397 reject_low 5 ALIGNMENT 0 YS2-1d13.q1k chr14 62 299 96615 96614 F 238 0.00 1397 reject_low 2 ALIGNMENT 0 YS2-1d13.q1k chr07 759 618 327906 327905 C 142 0.00 1397 reject_low 30 ALIGNMENT 107 YS2-1d13.q1k chr14 300 508 102197 102408 F 209 86.60 1397 reject_low 3 ALIGNMENT 916 YS2-1d14.p1k chr09 33 1180 280973 282156 F 1148 94.69 1199 accept_chi 1 ALIGNMENT 931 YS2-1d14.q1k chr07 1285 35 265710 266972 C 1251 92.97 1396 accept_chi 0 ALIGNMENT 840 YS2-1d15.q1k chr15 1071 33 86609 87650 C 1039 95.38 1333 accept 0 ALIGNMENT 920 YS2-1d15.p1k chr15 37 1142 85169 86280 F 1106 96.02 1292 accept 0 ALIGNMENT 828 YS2-1d16.q1k chr04 1000 34 1156926 1157880 C 967 96.79 1412 accept 0 ALIGNMENT 927 YS2-1d16.p1k chr04 29 1041 1156858 1157880 F 1013 98.22 1259 accept 0 ALIGNMENT 338 YS2-1d17.p1k vc_7 1 545 13918 14464 F 545 88.07 663 reject_low 5 ALIGNMENT 470 YS2-1d17.q1k vc_7 680 1 1895 2569 C 680 91.18 928 reject_low 1 ALIGNMENT 341 YS2-1d17.p1k vc_3 545 1 1203 1749 C 545 88.62 663 reject_low 4 ALIGNMENT 344 YS2-1d17.p1k vc_5 545 1 4123 4669 C 545 88.81 663 reject_vc 0 ALIGNMENT 0 YS2-1d17.q1k vc_4 62 237 1548 1547 F 176 0.00 928 reject_low 11 ALIGNMENT 79 YS2-1d17.q1k vc_7 419 305 4583 4699 C 115 91.30 928 reject_low 12 ALIGNMENT 167 YS2-1d17.q1k vc_4 308 680 1879 2246 F 373 84.72 928 reject_low 11 ALIGNMENT 63 YS2-1d17.q1k vc_4 238 302 1548 1612 F 65 100.00 928 reject_low 11 ALIGNMENT 341 YS2-1d17.p1k vc_1 545 1 1203 1749 C 545 88.62 663 reject_low 2 ALIGNMENT 298 YS2-1d17.q1k vc_3 1 302 2689 2990 F 302 99.67 928 reject_low 10 ALIGNMENT 63 YS2-1d17.q1k vc_4 302 238 48 112 C 65 100.00 928 reject_low 13 ALIGNMENT 243 YS2-1d17.q1k vc_7 302 53 4923 5172 C 250 99.20 928|0,1 reject_low 12 ALIGNMENT 0 YS2-1d17.q1k vc_7 304 303 4700 4922 C 2 0.00 928 reject_low 12 ALIGNMENT 0 YS2-1d17.q1k vc_7 53 54 5172 6360 C 0 0.00 928 reject_low 12 ALIGNMENT 63 YS2-1d17.q1k vc_4 302 238 6275 6339 C 65 100.00 928 reject_low 14 ALIGNMENT 298 YS2-1d17.q1k vc_2 1 302 2322 2623 F 302 99.67 928 reject_low 9 ALIGNMENT 341 YS2-1d17.p1k vc_2 545 1 1203 1749 C 545 88.62 663 reject_low 3 ALIGNMENT 0 YS2-1d17.q1k vc_4 303 307 1613 1878 F 5 0.00 928 reject_low 11 ALIGNMENT 338 YS2-1d17.p1k vc_7 1 545 456 1002 F 545 88.07 663 reject_low 1 ALIGNMENT 341 YS2-1d17.p1k vc_6 1 515 3712 4225 F 515 89.32 663 reject_low 6 ALIGNMENT 0 YS2-1d17.q1k vc_4 237 62 113 112 C 176 0.00 928 reject_low 13 ALIGNMENT 51 YS2-1d17.q1k vc_7 54 3 6360 6411 C 52 100.00 928|1,0 reject_low 12 ALIGNMENT 0 YS2-1d17.q1k vc_4 237 62 6340 6339 C 176 0.00 928 reject_low 14 ALIGNMENT 472 YS2-1d17.q1k vc_5 1 714 2556 3266 F 714 90.34 928 reject_vc 0 ALIGNMENT 298 YS2-1d17.q1k vc_1 1 302 2689 2990 F 302 99.67 928 reject_low 8 ALIGNMENT 370 YS2-1d17.q1k vc_4 419 1 5232 5654 C 419 96.66 928 reject_low 7 ALIGNMENT 862 YS2-1d18.p1k chr10 1003 33 447168 448151 C 971 98.15 1226 accept 0 ALIGNMENT 934 YS2-1d18.q1k chr10 34 1125 445377 446468 F 1092 96.15 1422 accept 0 ALIGNMENT 51 YS2-1d19.p1k chrm 469 565 34920 35016 F 97 87.63 1296 reject_low 4 ALIGNMENT 0 YS2-1d19.p1k chrm 62 469 48087 48086 F 408 0.00 1296 reject_low 6 ALIGNMENT 0 YS2-1d19.p1k chrm 532 865 53874 53873 F 334 0.00 1296 reject_low 7 ALIGNMENT 0 YS2-1d19.p1k chrm 62 462 34267 34266 F 401 0.00 1296 reject_low 2 ALIGNMENT 0 YS2-1d19.p1k chrm 472 62 47528 47527 C 411 0.00 1296 reject_low 5 ALIGNMENT 0 YS2-1d19.p1k chrm 527 865 10788 10787 F 339 0.00 1296 reject_low 9 ALIGNMENT 48 YS2-1d19.p1k chrm 470 555 48087 48173 F 86 87.21 1296 reject_low 6 ALIGNMENT 38 YS2-1d19.p1k chrm 525 478 33449 33495 C 48 95.83 1296 reject_low 8 ALIGNMENT 0 YS2-1d19.p1k chrm 645 865 76752 76751 F 221 0.00 1296 reject_low 1 ALIGNMENT 0 YS2-1d19.p1k chrm 62 482 77671 77670 F 421 0.00 1296 reject_low 3 ALIGNMENT 0 YS2-1d19.p1k chrm 865 562 47439 47438 C 304 0.00 1296 reject_low 5 ALIGNMENT 43 YS2-1d19.p1k chrm 476 644 76587 76752 F 169 84.02 1296 reject_low 1 ALIGNMENT 55 YS2-1d19.p1k chrm 561 473 47438 47527 C 89 89.89 1296 reject_low 5 ALIGNMENT 0 YS2-1d19.p1k chrm 558 865 77744 77743 F 308 0.00 1296 reject_low 3 ALIGNMENT 0 YS2-1d19.p1k chrm 556 865 48173 48172 F 310 0.00 1296 reject_low 6 ALIGNMENT 0 YS2-1d19.p1k chrm 477 62 33496 33495 C 416 0.00 1296 reject_low 8 ALIGNMENT 0 YS2-1d19.p1k chrm 570 865 34372 34371 F 296 0.00 1296 reject_low 2 ALIGNMENT 38 YS2-1d19.p1k chrm 482 526 10744 10788 F 45 97.78 1296 reject_low 9 ALIGNMENT 0 YS2-1d19.p1k chrm 62 475 76587 76586 F 414 0.00 1296 reject_low 1 ALIGNMENT 0 YS2-1d19.p1k chrm 865 526 33450 33449 C 340 0.00 1296 reject_low 8 ALIGNMENT 0 YS2-1d19.p1k chrm 62 468 34920 34919 F 407 0.00 1296 reject_low 4 ALIGNMENT 59 YS2-1d19.p1k chrm 483 557 77671 77744 F 75 94.67 1296 reject_low 3 ALIGNMENT 764 YS2-1d19.p1k chrm 33 1190 7779 8948 F 1158 96.37 1296 accept 0 ALIGNMENT 45 YS2-1d19.p1k chrm 475 531 53819 53874 F 57 94.74 1296 reject_low 7 ALIGNMENT 0 YS2-1d19.p1k chrm 566 865 35016 35015 F 300 0.00 1296 reject_low 4 ALIGNMENT 0 YS2-1d19.p1k chrm 62 481 10744 10743 F 420 0.00 1296 reject_low 9 ALIGNMENT 0 YS2-1d19.p1k chrm 62 474 53819 53818 F 413 0.00 1296 reject_low 7 ALIGNMENT 54 YS2-1d19.p1k chrm 463 569 34267 34372 F 107 88.79 1296 reject_low 2 ALIGNMENT 948 YS2-1d20.p1k chr07 1136 34 255523 256626 C 1103 96.46 1148 accept 0 ALIGNMENT 864 YS2-1d20.q1k chr07 27 1133 251311 252406 F 1107 94.22 1314 accept 0 ALIGNMENT 0 YS2-1d21.q1k vc_7 62 291 13525 13524 F 230 0.00 329 reject_low 7 ALIGNMENT 43 YS2-1d21.q1k vc_2 329 286 2105 2148 C 44 100.00 329 reject_low 3 ALIGNMENT 0 YS2-1d21.q1k chr07 289 329 84506 84505 F 41 0.00 329 accept_chi 0 ALIGNMENT 0 YS2-1d21.p1k chr07 312 294 84252 84251 C 19 0.00 312 accept_chi 1 ALIGNMENT 43 YS2-1d21.q1k vc_1 329 286 2472 2515 C 44 100.00 329 reject_low 2 ALIGNMENT 0 YS2-1d21.q1k vc_5 290 62 5064 5063 C 229 0.00 329 reject_low 6 ALIGNMENT 38 YS2-1d21.q1k vc_7 292 329 13525 13562 F 38 100.00 329 reject_low 7 ALIGNMENT 0 YS2-1d21.q1k vc_4 62 285 5828 5827 F 224 0.00 329 reject_low 5 ALIGNMENT 0 YS2-1d21.q1k vc_2 285 62 2149 2148 C 224 0.00 329 reject_low 3 ALIGNMENT 39 YS2-1d21.q1k vc_5 329 291 5025 5063 C 39 100.00 329 reject_low 6 ALIGNMENT 234 YS2-1d21.q1k chr07 32 288 84251 84506 F 257 99.22 329 accept_chi 0 ALIGNMENT 0 YS2-1d21.q1k vc_3 285 62 2516 2515 C 224 0.00 329 reject_low 4 ALIGNMENT 43 YS2-1d21.q1k vc_3 329 286 2472 2515 C 44 100.00 329 reject_low 4 ALIGNMENT 0 YS2-1d21.q1k vc_5 290 62 37 36 C 229 0.00 329 reject_low 8 ALIGNMENT 36 YS2-1d21.q1k vc_5 326 291 1 36 C 36 100.00 329 reject_low 8 ALIGNMENT 225 YS2-1d21.p1k chr07 293 39 84251 84502 C 255 98.82 312 accept_chi 1 ALIGNMENT 0 YS2-1d21.q1k vc_1 285 62 2516 2515 C 224 0.00 329 reject_low 2 ALIGNMENT 43 YS2-1d21.q1k vc_4 286 329 5828 5871 F 44 100.00 329 reject_low 5 ALIGNMENT 58 YS2-1d22.q1k vc_4 319 490 1889 2052 F 172 81.40 782 reject_vc 10 ALIGNMENT 0 YS2-1d22.q1k vc_4 237 62 6340 6339 C 176 0.00 782 reject_vc 9 ALIGNMENT 51 YS2-1d22.q1k vc_4 302 238 6275 6339 C 65 93.85 782 reject_vc 9 ALIGNMENT 228 YS2-1d22.q1k vc_7 302 53 4923 5172 C 250 97.20 782|0,1 reject_vc 7 ALIGNMENT 0 YS2-1d22.q1k vc_4 237 62 113 112 C 176 0.00 782 reject_vc 8 ALIGNMENT 51 YS2-1d22.q1k vc_4 302 238 48 112 C 65 93.85 782 reject_vc 8 ALIGNMENT 283 YS2-1d22.q1k vc_2 1 302 2322 2623 F 302 98.01 782 reject_vc 5 ALIGNMENT 328 YS2-1d22.q1k vc_4 420 1 5236 5654 C 420 93.33 782 reject_vc 3 ALIGNMENT 0 YS2-1d22.q1k vc_4 303 318 1613 1888 F 16 0.00 782 reject_vc 10 ALIGNMENT 0 YS2-1d22.q1k vc_7 304 303 4700 4922 C 2 0.00 782 reject_vc 7 ALIGNMENT 346 YS2-1d22.q1k vc_5 1 490 2556 3036 F 490 91.43 782 reject_vc 1 ALIGNMENT 315 YS2-1d22.p1k chr13 29 353 455141 455465 F 325 99.38 371 accept 0 ALIGNMENT 283 YS2-1d22.q1k vc_1 1 302 2689 2990 F 302 98.01 782 reject_vc 4 ALIGNMENT 52 YS2-1d22.q1k vc_7 420 305 4587 4699 C 116 83.62 782 reject_vc 7 ALIGNMENT 51 YS2-1d22.q1k vc_7 54 3 6360 6411 C 52 100.00 782|1,0 reject_vc 7 ALIGNMENT 0 YS2-1d22.q1k vc_7 53 54 5172 6360 C 0 0.00 782 reject_vc 7 ALIGNMENT 51 YS2-1d22.q1k vc_4 238 302 1548 1612 F 65 93.85 782 reject_vc 10 ALIGNMENT 283 YS2-1d22.q1k vc_3 1 302 2689 2990 F 302 98.01 782 reject_vc 6 ALIGNMENT 0 YS2-1d22.p1k chr13 354 371 455465 455464 F 18 0.00 371 accept 0 ALIGNMENT 346 YS2-1d22.q1k vc_7 472 1 2104 2569 C 472 91.95 782 reject_vc 2 ALIGNMENT 0 YS2-1d22.q1k vc_4 62 237 1548 1547 F 176 0.00 782 reject_vc 10 ALIGNMENT 27 YS2-1d23.p1k chrm 179 145 9495 9529 C 35 94.29 1353 reject_bad_break 0 ALIGNMENT 52 YS2-1d23.p1k chrm 141 38 9862 9964 C 104 88.46 1353 reject_bad_break 0 ALIGNMENT 0 YS2-1d23.p1k chrm 144 142 9530 9861 C 3 0.00 1353 reject_bad_break 0 ALIGNMENT 1037 YS2-1d24.p1k chr15 1212 33 1010260 1011454 C 1180 96.61 1213 accept 0 ALIGNMENT 687 YS2-1d24.q1k chr15 31 915 1007292 1008169 F 885 93.90 1308 accept 0 ALIGNMENT 967 YS2-1e01.p1k chr07 1177 33 206602 207755 C 1145 95.81 1279 accept 0 ALIGNMENT 796 YS2-1e01.q1k chr07 33 1172 202882 204025 F 1140 92.11 1351 accept 0 ALIGNMENT 1077 YS2-1e03.p1k chr04 33 1285 1020998 1022262 F 1253 96.17 1295 accept 0 ALIGNMENT 822 YS2-1e03.q1k chr04 1035 32 1021329 1022322 C 1004 95.32 1393 accept 0 ALIGNMENT 899 YS2-1e05.p1k chr13 29 1048 585643 586673 F 1020 97.45 1295 accept_chi 0 ALIGNMENT 868 YS2-1e05.q1k chr12 1061 26 647345 648380 C 1036 95.27 1411 accept_chi 1 ALIGNMENT 760 YS2-1e07.p1k chr13 32 1031 387126 388126 F 1000 92.60 1351 accept 0 ALIGNMENT 866 YS2-1e08.q1k chr04 1070 32 460525 461573 C 1039 95.28 1356 accept 0 ALIGNMENT 1038 YS2-1e08.p1k chr04 33 1223 456885 458079 F 1191 96.89 1307 accept 0 ALIGNMENT 906 YS2-1e09.p1k chr04 45 1141 191825 192926 F 1097 96.08 1156 accept_chi 0 ALIGNMENT 876 YS2-1e09.q1k chr16 1087 33 234199 235258 C 1055 95.73 1367 accept_chi 1 ALIGNMENT 277 YS2-1e10.p1k vc_4 754 1108 5871 6226 F 355 92.39 1374 reject_low 8 ALIGNMENT 0 YS2-1e10.p1k vc_3 753 62 2473 2472 C 692 0.00 1374 reject_low 11 ALIGNMENT 334 YS2-1e10.p1k vc_2 1340 754 1521 2105 C 587 86.03 1374 reject_low 3 ALIGNMENT 334 YS2-1e10.p1k vc_7 754 1340 100 684 F 587 86.03 1374 reject_low 6 ALIGNMENT 650 YS2-1e10.p1k chr06 736 34 83022 83724 C 703 98.44 1374 accept_chi 0 ALIGNMENT 0 YS2-1e10.p1k vc_3 753 62 2106 2105 C 692 0.00 1374 reject_low 4 ALIGNMENT 0 YS2-1e10.p1k vc_1 836 788 2439 2438 C 49 0.00 1374 reject_low 10 ALIGNMENT 0 YS2-1e10.p1k vc_4 62 753 5871 5870 F 692 0.00 1374 reject_low 8 ALIGNMENT 650 YS2-1e10.q1k chr06 32 734 83022 83724 F 703 98.44 734 accept_chi 1 ALIGNMENT 28 YS2-1e10.p1k vc_3 787 754 2438 2472 C 34 94.12 1374 reject_low 11 ALIGNMENT 334 YS2-1e10.p1k vc_3 1340 754 1521 2105 C 587 86.03 1374 reject_low 4 ALIGNMENT 334 YS2-1e10.p1k vc_5 1340 754 4441 5025 C 587 86.03 1374 reject_low 5 ALIGNMENT 0 YS2-1e10.p1k vc_7 62 753 13562 13561 F 692 0.00 1374 reject_low 7 ALIGNMENT 334 YS2-1e10.p1k vc_7 754 1340 13562 14146 F 587 86.03 1374 reject_low 7 ALIGNMENT 0 YS2-1e10.p1k vc_1 753 62 2473 2472 C 692 0.00 1374 reject_low 10 ALIGNMENT 0 YS2-1e10.p1k vc_2 753 62 2106 2105 C 692 0.00 1374 reject_low 3 ALIGNMENT 0 YS2-1e10.p1k vc_3 836 788 2439 2438 C 49 0.00 1374 reject_low 11 ALIGNMENT 0 YS2-1e10.p1k vc_5 753 62 5026 5025 C 692 0.00 1374 reject_low 5 ALIGNMENT 146 YS2-1e10.p1k vc_6 981 1233 3585 3836 F 253 86.96 1374 reject_low 9 ALIGNMENT 334 YS2-1e10.p1k vc_1 1340 754 1521 2105 C 587 86.03 1374 reject_low 2 ALIGNMENT 28 YS2-1e10.p1k vc_1 787 754 2438 2472 C 34 94.12 1374 reject_low 10 ALIGNMENT 0 YS2-1e10.p1k vc_7 62 753 100 99 F 692 0.00 1374 reject_low 6 ALIGNMENT 0 YS2-1e10.p1k vc_1 753 62 2106 2105 C 692 0.00 1374 reject_low 2 ALIGNMENT 0 YS2-1e10.p1k chr06 836 737 83023 83022 C 100 0.00 1374 accept_chi 0 ALIGNMENT 0 YS2-1e10.p1k vc_6 62 980 3585 3584 F 919 0.00 1374 reject_low 9 ALIGNMENT 0 YS2-1e11.q1k vc_5 740 62 35 34 C 679 0.00 1452 reject_low 15 ALIGNMENT 38 YS2-1e11.q1k vc_1 777 737 2472 2512 C 41 97.56 1452 reject_low 9 ALIGNMENT 0 YS2-1e11.q1k vc_7 62 740 64 63 F 679 0.00 1452 reject_low 13 ALIGNMENT 0 YS2-1e11.q1k vc_4 778 777 5872 6353 F 0 0.00 1452 reject_low 8 ALIGNMENT 34 YS2-1e11.q1k vc_5 774 741 1 34 C 34 100.00 1452 reject_low 15 ALIGNMENT 667 YS2-1e11.q1k chr10 30 735 186682 187388 F 706 99.43 1452 accept_chi 1 ALIGNMENT 74 YS2-1e11.q1k vc_4 777 941 6353 6514 F 165 83.03 1452|1,0 reject_low 8 ALIGNMENT 89 YS2-1e11.q1k vc_3 777 982 2531 2732 F 206 83.01 1452 reject_low 5 ALIGNMENT 0 YS2-1e11.q1k vc_5 62 776 2398 2397 F 715 0.00 1452 reject_low 6 ALIGNMENT 0 YS2-1e11.q1k vc_4 776 62 1535 1534 C 715 0.00 1452 reject_low 14 ALIGNMENT 0 YS2-1e11.q1k vc_4 62 736 5831 5830 F 675 0.00 1452 reject_low 8 ALIGNMENT 0 YS2-1e11.q1k vc_5 740 62 5062 5061 C 679 0.00 1452 reject_low 12 ALIGNMENT 89 YS2-1e11.q1k vc_5 777 982 2398 2599 F 206 83.01 1452 reject_low 6 ALIGNMENT 89 YS2-1e11.q1k vc_2 777 982 2164 2365 F 206 83.01 1452 reject_low 4 ALIGNMENT 0 YS2-1e11.q1k vc_3 736 62 2513 2512 C 675 0.00 1452 reject_low 11 ALIGNMENT 38 YS2-1e11.q1k vc_3 777 737 2472 2512 C 41 97.56 1452 reject_low 11 ALIGNMENT 0 YS2-1e11.q1k vc_4 776 62 5813 5812 C 715 0.00 1452 reject_low 2 ALIGNMENT 74 YS2-1e11.q1k vc_4 777 941 126 287 F 165 83.03 1452 reject_low 7 ALIGNMENT 0 YS2-1e11.q1k vc_4 62 776 126 125 F 715 0.00 1452 reject_low 7 ALIGNMENT 670 YS2-1e11.p1k chr10 737 33 186682 187388 C 705 99.72 755 accept_chi 0 ALIGNMENT 89 YS2-1e11.q1k vc_1 777 982 2531 2732 F 206 83.01 1452 reject_low 3 ALIGNMENT 37 YS2-1e11.q1k vc_7 741 777 64 100 F 37 100.00 1452 reject_low 13 ALIGNMENT 47 YS2-1e11.q1k vc_4 862 777 1451 1534 C 86 87.21 1452 reject_low 14 ALIGNMENT 0 YS2-1e11.q1k vc_2 62 776 2164 2163 F 715 0.00 1452 reject_low 4 ALIGNMENT 38 YS2-1e11.q1k vc_4 737 777 5831 5871 F 41 97.56 1452 reject_low 8 ALIGNMENT 0 YS2-1e11.q1k vc_1 736 62 2513 2512 C 675 0.00 1452 reject_low 9 ALIGNMENT 0 YS2-1e11.q1k vc_2 736 62 2146 2145 C 675 0.00 1452 reject_low 10 ALIGNMENT 90 YS2-1e11.q1k vc_4 999 777 5593 5812 C 223 82.06 1452 reject_low 2 ALIGNMENT 0 YS2-1e11.q1k vc_3 62 776 2531 2530 F 715 0.00 1452 reject_low 5 ALIGNMENT 0 YS2-1e11.q1k vc_1 62 776 2531 2530 F 715 0.00 1452 reject_low 3 ALIGNMENT 37 YS2-1e11.q1k vc_5 777 741 5025 5061 C 37 100.00 1452 reject_low 12 ALIGNMENT 0 YS2-1e11.p1k chr10 755 738 186683 186682 C 18 0.00 755 accept_chi 0 ALIGNMENT 38 YS2-1e11.q1k vc_2 777 737 2105 2145 C 41 97.56 1452 reject_low 10 ALIGNMENT 59 YS2-1e12.q1k vc_4 238 304 1548 1614 F 67 97.01 909 reject_low 7 ALIGNMENT 78 YS2-1e12.q1k vc_7 416 305 4588 4699 C 112 91.96 909 reject_low 6 ALIGNMENT 51 YS2-1e12.q1k vc_7 54 3 6360 6411 C 52 100.00 909|1,0 reject_low 6 ALIGNMENT 292 YS2-1e12.q1k vc_2 1 303 2322 2624 F 303 99.01 909 reject_low 4 ALIGNMENT 0 YS2-1e12.q1k vc_7 53 54 5172 6360 C 0 0.00 909 reject_low 6 ALIGNMENT 0 YS2-1e12.q1k vc_4 62 237 1548 1547 F 176 0.00 909 reject_low 7 ALIGNMENT 238 YS2-1e12.q1k vc_7 303 53 4922 5172 C 251 98.41 909|0,1 reject_low 6 ALIGNMENT 292 YS2-1e12.q1k vc_3 1 303 2689 2991 F 303 99.01 909 reject_low 5 ALIGNMENT 0 YS2-1e12.q1k vc_4 237 62 6340 6339 C 176 0.00 909 reject_low 9 ALIGNMENT 366 YS2-1e12.q1k vc_4 416 1 5237 5654 C 416 96.63 909 reject_low 2 ALIGNMENT 422 YS2-1e12.q1k vc_7 637 1 1937 2569 C 637 89.80 909 reject_vc 1 ALIGNMENT 422 YS2-1e12.q1k vc_5 1 637 2556 3188 F 637 89.80 909 reject_vc 0 ALIGNMENT 292 YS2-1e12.q1k vc_1 1 303 2689 2991 F 303 99.01 909 reject_low 3 ALIGNMENT 0 YS2-1e12.q1k vc_4 237 62 113 112 C 176 0.00 909 reject_low 8 ALIGNMENT 123 YS2-1e12.q1k vc_4 308 637 1879 2204 F 330 81.21 909 reject_low 7 ALIGNMENT 59 YS2-1e12.q1k vc_4 304 238 6273 6339 C 67 97.01 909 reject_low 9 ALIGNMENT 0 YS2-1e12.q1k vc_4 305 307 1615 1878 F 3 0.00 909 reject_low 7 ALIGNMENT 59 YS2-1e12.q1k vc_4 304 238 46 112 C 67 97.01 909 reject_low 8 ALIGNMENT 0 YS2-1e12.q1k vc_7 304 304 4700 4921 C 1 0.00 909 reject_low 6 ALIGNMENT 955 YS2-1e13.q1k chr15 1266 30 97425 98669 C 1237 94.26 1320 accept 0 ALIGNMENT 917 YS2-1e13.p1k chr15 32 1166 94637 95785 F 1135 94.63 1287 accept 0 ALIGNMENT 920 YS2-1e15.p1k chr13 1087 30 564834 565899 C 1058 96.98 1386 accept 0 ALIGNMENT 860 YS2-1e15.q1k chr13 93 1137 563919 564955 F 1045 95.41 1434 accept 0 ALIGNMENT 625 YS2-1e18.q1k chr04 28 815 139204 139986 F 788 95.30 1310 accept 0 ALIGNMENT 957 YS2-1e18.p1k chr04 1120 37 142616 143712 C 1084 97.42 1241 accept 0 ALIGNMENT 0 YS2-1e20.q1k vc_7 304 304 4700 4921 C 1 0.00 901 reject_low 12 ALIGNMENT 65 YS2-1e20.q1k vc_4 304 238 6273 6339 C 67 100.00 901 reject_low 14 ALIGNMENT 106 YS2-1e20.q1k vc_7 421 305 4583 4699 C 117 97.44 901 reject_low 12 ALIGNMENT 302 YS2-1e20.q1k vc_3 1 303 2689 2991 F 303 100.00 901 reject_low 11 ALIGNMENT 414 YS2-1e20.p1k vc_2 603 1 1143 1749 C 603 90.55 678 reject_low 4 ALIGNMENT 515 YS2-1e20.q1k vc_5 1 704 2556 3250 F 704 92.19 901 reject_vc 0 ALIGNMENT 65 YS2-1e20.q1k vc_4 304 238 46 112 C 67 100.00 901 reject_low 13 ALIGNMENT 408 YS2-1e20.p1k vc_7 1 603 13918 14524 F 603 90.22 678 reject_low 6 ALIGNMENT 0 YS2-1e20.q1k vc_4 237 62 113 112 C 176 0.00 901 reject_low 13 ALIGNMENT 51 YS2-1e20.q1k vc_7 54 3 6360 6411 C 52 100.00 901|1,0 reject_low 12 ALIGNMENT 414 YS2-1e20.p1k vc_1 603 1 1143 1749 C 603 90.55 678 reject_low 3 ALIGNMENT 515 YS2-1e20.q1k vc_7 704 1 1875 2569 C 704 92.19 901 reject_vc 1 ALIGNMENT 0 YS2-1e20.q1k vc_7 53 54 5172 6360 C 0 0.00 901 reject_low 12 ALIGNMENT 414 YS2-1e20.p1k vc_3 603 1 1143 1749 C 603 90.55 678 reject_low 5 ALIGNMENT 302 YS2-1e20.q1k vc_2 1 303 2322 2624 F 303 100.00 901 reject_low 10 ALIGNMENT 0 YS2-1e20.q1k vc_4 237 62 6340 6339 C 176 0.00 901 reject_low 14 ALIGNMENT 0 YS2-1e20.q1k vc_4 62 237 1548 1547 F 176 0.00 901 reject_low 8 ALIGNMENT 204 YS2-1e20.q1k vc_4 308 704 1879 2266 F 397 85.89 901 reject_low 8 ALIGNMENT 417 YS2-1e20.p1k vc_6 1 603 3712 4318 F 603 90.71 678 reject_low 2 ALIGNMENT 247 YS2-1e20.q1k vc_7 303 53 4922 5172 C 251 99.60 901|0,1 reject_low 12 ALIGNMENT 408 YS2-1e20.p1k vc_7 1 603 456 1062 F 603 90.22 678 reject_vc 1 ALIGNMENT 417 YS2-1e20.p1k vc_5 603 1 4063 4669 C 603 90.71 678 reject_vc 0 ALIGNMENT 65 YS2-1e20.q1k vc_4 238 304 1548 1614 F 67 100.00 901 reject_low 8 ALIGNMENT 302 YS2-1e20.q1k vc_1 1 303 2689 2991 F 303 100.00 901 reject_low 9 ALIGNMENT 0 YS2-1e20.q1k vc_4 305 307 1615 1878 F 3 0.00 901 reject_low 8 ALIGNMENT 404 YS2-1e20.q1k vc_4 421 1 5232 5654 C 421 98.81 901 reject_low 7 ALIGNMENT 0 YS2-1e21.q1k chr06 662 643 186209 186208 C 20 0.00 1301 reject_low 2 ALIGNMENT 0 YS2-1e21.q1k chr09 604 62 105390 105389 C 543 0.00 1301 reject_low 1 ALIGNMENT 0 YS2-1e21.q1k chr09 662 641 105766 105765 C 22 0.00 1301 reject_low 3 ALIGNMENT 0 YS2-1e21.q1k chr09 603 62 105802 105801 C 542 0.00 1301 reject_low 3 ALIGNMENT 20 YS2-1e21.q1k chr09 640 604 105765 105801 C 37 100.00 1301 reject_low 3 ALIGNMENT 606 YS2-1e21.q1k chr13 871 28 238089 238930 C 844 92.18 1301 accept 0 ALIGNMENT 21 YS2-1e21.q1k chr06 642 604 186208 186246 C 39 100.00 1301 reject_low 2 ALIGNMENT 0 YS2-1e21.q1k chr06 603 62 186247 186246 C 542 0.00 1301 reject_low 2 ALIGNMENT 23 YS2-1e21.q1k chr09 655 605 105339 105389 C 51 92.16 1301 reject_low 1 ALIGNMENT 212 YS2-1e23.q1k vc_3 1 283 2689 2968 F 283 92.93 918 reject_vc 6 ALIGNMENT 231 YS2-1e23.q1k vc_5 1 382 2556 2933 F 382 88.22 918 reject_vc 1 ALIGNMENT 51 YS2-1e23.q1k vc_7 54 3 6360 6411 C 52 100.00 918|1,0 reject_vc 7 ALIGNMENT 272 YS2-1e23.p1k chr12 312 34 1022730 1023008 C 279 99.28 330 accept 0 ALIGNMENT 0 YS2-1e23.p1k chr12 330 313 1022731 1022730 C 18 0.00 330 accept 0 ALIGNMENT 158 YS2-1e23.q1k vc_7 283 53 4945 5172 C 231 90.91 918|0,1 reject_vc 7 ALIGNMENT 0 YS2-1e23.q1k vc_7 53 54 5172 6360 C 0 0.00 918 reject_vc 7 ALIGNMENT 31 YS2-1e23.q1k vc_4 283 244 6297 6336 C 40 92.50 918 reject_vc 10 ALIGNMENT 212 YS2-1e23.q1k vc_2 1 283 2322 2601 F 283 92.93 918 reject_vc 5 ALIGNMENT 31 YS2-1e23.q1k vc_4 244 283 1551 1590 F 40 92.50 918 reject_vc 9 ALIGNMENT 31 YS2-1e23.q1k vc_4 283 244 70 109 C 40 92.50 918 reject_vc 8 ALIGNMENT 212 YS2-1e23.q1k vc_1 1 283 2689 2968 F 283 92.93 918 reject_vc 4 ALIGNMENT 227 YS2-1e23.q1k vc_7 367 1 2206 2569 C 367 88.56 918 reject_vc 3 ALIGNMENT 224 YS2-1e23.q1k vc_4 382 1 5275 5654 C 382 87.70 918 reject_vc 2 ALIGNMENT 21 YS2-1e24.p1k chr09 452 486 390994 391028 F 35 88.57 1209 reject_low 34 ALIGNMENT 0 YS2-1e24.p1k chr09 222 221 391700 391754 F 0 0.00 1209 reject_low 31 ALIGNMENT 62 YS2-1e24.p1k chr09 229 315 391842 391928 F 87 91.95 1209 reject_low 36 ALIGNMENT 0 YS2-1e24.p1k chr09 62 179 392207 392206 F 118 0.00 1209 reject_low 26 ALIGNMENT 25 YS2-1e24.p1k chr09 918 960 391235 391278 F 43 88.37 1209|1,0 reject_low 41 ALIGNMENT 63 YS2-1e24.p1k chr09 217 521 391750 392044 F 305 78.36 1209|5,0 reject_low 31 ALIGNMENT 22 YS2-1e24.p1k chr09 180 214 391703 391737 F 35 88.57 1209|0,6 reject_low 35 ALIGNMENT 40 YS2-1e24.p1k chr09 1021 1083 391262 391325 F 63 88.89 1209|9,0 reject_low 24,32 ALIGNMENT 25 YS2-1e24.p1k chr09 920 960 391101 391143 F 41 90.24 1209 reject_low 37,38 ALIGNMENT 0 YS2-1e24.p1k chr09 143 411 390967 390998 F 269 0.00 1209 reject_low 4,6,11,12,14,15 ALIGNMENT 100 YS2-1e24.p1k chr09 229 463 392094 392319 F 235 84.68 1209 reject_low 13 ALIGNMENT 0 YS2-1e24.p1k chr09 1038 1041 391585 392128 F 4 0.00 1209 reject_low 12 ALIGNMENT 0 YS2-1e24.p1k chr09 542 1041 392101 392128 F 500 0.00 1209 reject_low 7 ALIGNMENT 20 YS2-1e24.p1k chr09 351 387 392288 392324 F 37 86.49 1209 reject_low 18 ALIGNMENT 0 YS2-1e24.p1k chr09 223 222 391278 391881 F 0 0.00 1209 reject_low 22 ALIGNMENT 0 YS2-1e24.p1k chr09 143 142 390967 391197 F 0 0.00 1209 reject_low 2,5,8,9,10,13 ALIGNMENT 0 YS2-1e24.p1k chr09 478 1041 391965 392128 F 564 0.00 1209 reject_low 23 ALIGNMENT 300 YS2-1e24.p1k chr09 180 781 391370 391962 F 602 86.05 1209 reject_low 3 ALIGNMENT 0 YS2-1e24.p1k chr09 143 179 390967 391747 F 37 0.00 1209 reject_low 7 ALIGNMENT 0 YS2-1e24.p1k chr09 62 622 390994 390993 F 561 0.00 1209 reject_low 41 ALIGNMENT 0 YS2-1e24.p1k chr09 1051 1050 391337 392137 F 0 0.00 1209 reject_low 30 ALIGNMENT 0 YS2-1e24.p1k chr09 782 1041 391963 392128 F 260 0.00 1209 reject_low 3 ALIGNMENT 20 YS2-1e24.p1k chr09 668 781 390994 391107 F 114 73.68 1209 reject_low 28 ALIGNMENT 0 YS2-1e24.p1k chr09 262 271 392370 392442 F 10 0.00 1209 reject_low 27 ALIGNMENT 0 YS2-1e24.p1k chr09 1038 1041 391414 392128 F 4 0.00 1209 reject_low 14 ALIGNMENT 423 YS2-1e24.p1k chr09 240 1037 391259 392043 F 798 87.34 1209 reject_low 2 ALIGNMENT 119 YS2-1e24.p1k chr09 785 1147 391101 391483 F 363 79.89 1209 reject_low 6 ALIGNMENT 0 YS2-1e24.p1k chr09 285 284 392312 392455 F 0 0.00 1209 reject_low 26 ALIGNMENT 0 YS2-1e24.p1k chr09 433 1041 391965 392128 F 609 0.00 1209 reject_low 36 ALIGNMENT 0 YS2-1e24.p1k chr09 62 179 391703 391702 F 118 0.00 1209 reject_low 35 ALIGNMENT 70 YS2-1e24.p1k chr09 203 288 392419 392504 F 86 95.35 1209|13,0 reject_low 29 ALIGNMENT 455 YS2-1e24.p1k chr09 143 1091 391027 391972 F 949 86.30 1209 accept 0 ALIGNMENT 0 YS2-1e24.p1k chr09 522 895 391109 391086 F 374 0.00 1209 reject_low 38 ALIGNMENT 0 YS2-1e24.p1k chr09 62 712 390994 390993 F 651 0.00 1209 reject_low 16 ALIGNMENT 31 YS2-1e24.p1k chr09 1042 1147 392129 392239 F 106 79.25 1209|9,0 reject_low 2,3,5,7,8,9,10,12,14,15,20,21,22,23,30,31,36 ALIGNMENT 0 YS2-1e24.p1k chr09 62 411 390999 390998 F 350 0.00 1209 reject_low 30,32,38 ALIGNMENT 0 YS2-1e24.p1k chr09 487 647 391029 391063 F 161 0.00 1209 reject_low 34 ALIGNMENT 132 YS2-1e24.p1k chr09 695 1083 391101 391496 F 389 80.98 1209 reject_low 11 ALIGNMENT 99 YS2-1e24.p1k chr09 740 1037 391101 391413 F 298 80.20 1209 reject_low 14 ALIGNMENT 0 YS2-1e24.p1k chr09 738 757 391109 390993 F 20 0.00 1209 reject_low 41 ALIGNMENT 0 YS2-1e24.p1k chr09 223 222 391278 391665 F 0 0.00 1209 reject_low 9 ALIGNMENT 0 YS2-1e24.p1k chr09 613 1041 391965 392128 F 429 0.00 1209 reject_low 20 ALIGNMENT 0 YS2-1e24.p1k chr09 1030 1029 391181 391270 F 0 0.00 1209 reject_low 24 ALIGNMENT 51 YS2-1e24.p1k chr09 180 261 392288 392369 F 82 89.02 1209 reject_low 27 ALIGNMENT 0 YS2-1e24.p1k chr09 909 908 391100 391099 F 0 0.00 1209 reject_low 37 ALIGNMENT 0 YS2-1e24.p1k chr09 62 179 392000 391999 F 118 0.00 1209 reject_low 17 ALIGNMENT 29 YS2-1e24.p1k chr09 217 325 392002 392100 F 109 80.73 1209|5,0 reject_low 33 ALIGNMENT 0 YS2-1e24.p1k chr09 215 214 391693 392070 F 0 0.00 1209 reject_low 39,40 ALIGNMENT 32 YS2-1e24.p1k chr09 217 315 392128 392216 F 99 82.83 1209|6,0 reject_low 39 ALIGNMENT 0 YS2-1e24.p1k chr09 692 1041 391963 392128 F 350 0.00 1209 reject_low 10 ALIGNMENT 313 YS2-1e24.p1k chr09 497 1091 390994 391594 F 595 86.72 1209 reject_low 1 ALIGNMENT 0 YS2-1e24.p1k chr09 316 804 392486 392485 F 489 0.00 1209 reject_low 26,27 ALIGNMENT 91 YS2-1e24.p1k chr09 180 305 392126 392251 F 126 92.06 1209 reject_low 25 ALIGNMENT 0 YS2-1e24.p1k chr09 961 1013 391144 391118 F 53 0.00 1209 reject_low 38 ALIGNMENT 0 YS2-1e24.p1k chr09 513 804 392323 392322 F 292 0.00 1209 reject_low 17 ALIGNMENT 21 YS2-1e24.p1k chr09 893 927 390994 391028 F 35 88.57 1209 reject_low 19 ALIGNMENT 0 YS2-1e24.p1k chr09 143 179 390967 391369 F 37 0.00 1209 reject_low 3 ALIGNMENT 0 YS2-1e24.p1k chr09 62 892 390994 390993 F 831 0.00 1209 reject_low 19 ALIGNMENT 245 YS2-1e24.p1k chr09 650 1083 391101 391541 F 434 87.33 1209 reject_low 4 ALIGNMENT 0 YS2-1e24.p1k chr09 228 239 391283 391258 F 12 0.00 1209 reject_low 2 ALIGNMENT 0 YS2-1e24.p1k chr09 62 142 391198 391197 F 81 0.00 1209 reject_low 22,23,29 ALIGNMENT 0 YS2-1e24.p1k chr09 326 387 392101 392289 F 62 0.00 1209 reject_low 33 ALIGNMENT 0 YS2-1e24.p1k chr09 223 222 392079 392214 F 0 0.00 1209 reject_low 40 ALIGNMENT 182 YS2-1e24.p1k chr09 203 531 391600 391928 F 329 86.93 1209|13,0 reject_low 8 ALIGNMENT 21 YS2-1e24.p1k chr09 648 691 391064 391107 F 44 84.09 1209 reject_low 34 ALIGNMENT 67 YS2-1e24.p1k chr09 830 1059 391101 391345 F 230 79.13 1209|0,9 reject_low 30 ALIGNMENT 181 YS2-1e24.p1k chr09 614 1037 391156 391584 F 424 83.73 1209 reject_low 12 ALIGNMENT 0 YS2-1e24.p1k chr09 522 784 391109 391100 F 263 0.00 1209 reject_low 6 ALIGNMENT 71 YS2-1e24.p1k chr09 227 477 391714 391964 F 251 80.08 1209|1,0 reject_low 23 ALIGNMENT 0 YS2-1e24.p1k chr09 289 804 392504 392503 F 516 0.00 1209 reject_low 29 ALIGNMENT 0 YS2-1e24.p1k chr09 62 179 391541 391540 F 118 0.00 1209 reject_low 20 ALIGNMENT 146 YS2-1e24.p1k chr09 217 687 391660 392120 F 471 81.32 1209|6,0 reject_low 9 ALIGNMENT 0 YS2-1e24.p1k chr09 62 847 390994 390993 F 786 0.00 1209 reject_low 24 ALIGNMENT 0 YS2-1e24.p1k chr09 306 1041 392045 392128 F 736 0.00 1209 reject_low 21 ALIGNMENT 88 YS2-1e24.p1k chr09 180 305 391919 392044 F 126 91.27 1209 reject_low 21 ALIGNMENT 0 YS2-1e24.p1k chr09 62 350 392288 392287 F 289 0.00 1209 reject_low 18 ALIGNMENT 0 YS2-1e24.p1k chr09 228 387 392084 392289 F 160 0.00 1209 reject_low 35 ALIGNMENT 56 YS2-1e24.p1k chr09 848 1037 390994 391188 F 190 78.42 1209|0,8 reject_low 24 ALIGNMENT 0 YS2-1e24.p1k chr09 62 179 392126 392125 F 118 0.00 1209 reject_low 25 ALIGNMENT 85 YS2-1e24.p1k chr09 180 612 391541 391964 F 433 77.37 1209 reject_low 20 ALIGNMENT 90 YS2-1e24.p1k chr09 217 471 391876 392120 F 255 82.75 1209|6,0 reject_low 22 ALIGNMENT 0 YS2-1e24.p1k chr09 919 918 391110 391235 F 0 0.00 1209 reject_low 41 ALIGNMENT 0 YS2-1e24.p1k chr09 143 142 390967 391026 F 0 0.00 1209 accept 0 ALIGNMENT 85 YS2-1e24.p1k chr09 180 296 392207 392323 F 117 92.31 1209|0,12 reject_low 26 ALIGNMENT 116 YS2-1e24.p1k chr09 217 691 391498 391962 F 475 79.79 1209|6,0 reject_low 10 ALIGNMENT 0 YS2-1e24.p1k chr09 472 1041 392121 392128 F 570 0.00 1209 reject_low 22 ALIGNMENT 0 YS2-1e24.p1k chr09 738 1041 391964 392128 F 304 0.00 1209 reject_low 5 ALIGNMENT 0 YS2-1e24.p1k chr09 522 829 391109 391100 F 308 0.00 1209 reject_low 30 ALIGNMENT 137 YS2-1e24.p1k chr09 180 541 391748 392100 F 362 82.32 1209 reject_low 7 ALIGNMENT 23 YS2-1e24.p1k chr09 758 872 390994 391108 F 115 74.78 1209 reject_low 41 ALIGNMENT 98 YS2-1e24.p1k chr09 34 142 390858 390966 F 109 99.08 1209 accept 0 reject_low 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15 ALIGNMENT 23 YS2-1e24.p1k chr09 180 226 391658 391704 F 47 85.11 1209|0,12 reject_low 31,33,36,39,40 ALIGNMENT 0 YS2-1e24.p1k chr09 62 179 392288 392287 F 118 0.00 1209 reject_low 27 ALIGNMENT 0 YS2-1e24.p1k chr09 962 1041 391541 392128 F 80 0.00 1209 reject_low 15 ALIGNMENT 20 YS2-1e24.p1k chr09 896 919 391087 391110 F 24 95.83 1209|13,1 reject_low 28,34,37,38,41 ALIGNMENT 31 YS2-1e24.p1k chr09 272 315 392443 392486 F 44 90.91 1209|13,0 reject_low 26,27 ALIGNMENT 0 YS2-1e24.p1k chr09 388 804 392324 392323 F 417 0.00 1209 reject_low 18 ALIGNMENT 215 YS2-1e24.p1k chr09 648 961 391235 391540 F 314 92.36 1209 reject_low 15 ALIGNMENT 0 YS2-1e24.p1k chr09 464 804 392319 392318 F 341 0.00 1209 reject_low 13 ALIGNMENT 0 YS2-1e24.p1k chr09 62 179 391919 391918 F 118 0.00 1209 reject_low 21 ALIGNMENT 0 YS2-1e24.p1k chr09 920 919 391111 391100 F 0 0.00 1209 reject_low 37,38 ALIGNMENT 0 YS2-1e24.p1k chr09 216 215 391271 391612 F 0 0.00 1209 reject_low 8 ALIGNMENT 0 YS2-1e24.p1k chr09 961 1042 391144 391579 F 82 0.00 1209 reject_low 37 ALIGNMENT 0 YS2-1e24.p1k chr09 522 649 391109 391100 F 128 0.00 1209 reject_low 4 ALIGNMENT 0 YS2-1e24.p1k chr09 223 222 392079 392133 F 0 0.00 1209 reject_low 39 ALIGNMENT 0 YS2-1e24.p1k chr09 316 387 392298 392289 F 72 0.00 1209 reject_low 40 ALIGNMENT 0 YS2-1e24.p1k chr09 522 566 391109 391144 F 45 0.00 1209 reject_low 15 ALIGNMENT 0 YS2-1e24.p1k chr09 1038 1041 392044 392128 F 4 0.00 1209 reject_low 2 ALIGNMENT 23 YS2-1e24.p1k chr09 623 737 390994 391108 F 115 74.78 1209 reject_low 41 ALIGNMENT 22 YS2-1e24.p1k chr09 388 421 392290 392322 F 34 91.18 1209 reject_low 25,33,35,39,40 ALIGNMENT 23 YS2-1e24.p1k chr09 1043 1147 391580 391690 F 105 77.14 1209 reject_low 37,41 ALIGNMENT 0 YS2-1e24.p1k chr09 227 228 391705 391841 F 2 0.00 1209 reject_low 36 ALIGNMENT 39 YS2-1e24.p1k chr09 1014 1082 391119 391189 F 69 86.96 1209 reject_low 38 ALIGNMENT 21 YS2-1e24.p1k chr09 203 227 392059 392083 F 25 96.00 1209|12,5 reject_low 13,29,35,39,40 ALIGNMENT 66 YS2-1e24.p1k chr09 143 227 391198 391282 F 85 95.29 1209|0,12 reject_low 2,5,8,9,10,13,22,23,29 ALIGNMENT 682 YS2-1e24.q1k chr09 930 27 393326 394220 C 904 93.25 1398 accept 0 ALIGNMENT 0 YS2-1e24.p1k chr09 782 895 391108 391086 F 114 0.00 1209 reject_low 28 ALIGNMENT 0 YS2-1e24.p1k chr09 62 802 390994 390993 F 741 0.00 1209 reject_low 37 ALIGNMENT 24 YS2-1e24.p1k chr09 399 432 391931 391964 F 34 91.18 1209 reject_low 36 ALIGNMENT 0 YS2-1e24.p1k chr09 316 398 391929 391930 F 83 0.00 1209 reject_low 36 ALIGNMENT 0 YS2-1e24.p1k chr09 422 804 392322 392321 F 383 0.00 1209 reject_low 25,33,35,39,40 ALIGNMENT 0 YS2-1e24.p1k chr09 522 694 391109 391100 F 173 0.00 1209 reject_low 11 ALIGNMENT 0 YS2-1e24.p1k chr09 143 496 390967 390993 F 354 0.00 1209 reject_low 1 ALIGNMENT 0 YS2-1e24.p1k chr09 306 387 392252 392289 F 82 0.00 1209 reject_low 25 ALIGNMENT 21 YS2-1e24.p1k chr09 567 611 391145 391189 F 45 84.44 1209 reject_low 15 ALIGNMENT 0 YS2-1e24.p1k chr09 62 179 391658 391657 F 118 0.00 1209 reject_low 31,33,36,39,40 ALIGNMENT 0 YS2-1e24.p1k chr09 522 613 391109 391155 F 92 0.00 1209 reject_low 12 ALIGNMENT 0 YS2-1e24.p1k chr09 692 895 391108 391086 F 204 0.00 1209 reject_low 34 ALIGNMENT 0 YS2-1e24.p1k chr09 216 215 392072 392431 F 0 0.00 1209 reject_low 29 ALIGNMENT 26 YS2-1e24.p1k chr09 803 920 390994 391111 F 118 75.42 1209|0,12 reject_low 37 ALIGNMENT 30 YS2-1e24.p1k chr09 412 521 390999 391108 F 110 77.27 1209 reject_low 4,6,11,12,14,15,30,32,38 ALIGNMENT 0 YS2-1e24.p1k chr09 522 874 391109 391100 F 353 0.00 1209 reject_low 32 ALIGNMENT 0 YS2-1e24.p1k chr09 62 667 390994 390993 F 606 0.00 1209 reject_low 28 ALIGNMENT 0 YS2-1e24.p1k chr09 612 647 391190 391234 F 36 0.00 1209 reject_low 15 ALIGNMENT 0 YS2-1e24.p1k chr09 961 1042 391279 391579 F 82 0.00 1209 reject_low 41 ALIGNMENT 0 YS2-1e24.p1k chr09 316 387 392217 392289 F 72 0.00 1209 reject_low 39 ALIGNMENT 0 YS2-1e24.p1k chr09 222 221 391700 392006 F 0 0.00 1209 reject_low 33 ALIGNMENT 32 YS2-1e24.p1k chr09 217 315 392209 392297 F 99 82.83 1209|6,0 reject_low 40 ALIGNMENT 0 YS2-1e24.p1k chr09 216 215 391271 392071 F 0 0.00 1209 reject_low 13,29 ALIGNMENT 0 YS2-1e24.p1k chr09 962 1020 391190 391261 F 59 0.00 1209 reject_low 32 ALIGNMENT 0 YS2-1e24.p1k chr09 688 1041 392121 392128 F 354 0.00 1209 reject_low 9 ALIGNMENT 0 YS2-1e24.p1k chr09 522 739 391109 391100 F 218 0.00 1209 reject_low 14 ALIGNMENT 0 YS2-1e24.p1k chr09 209 208 391732 392064 F 0 0.00 1209 reject_low 35 ALIGNMENT 73 YS2-1e24.p1k chr09 713 1083 390994 391370 F 371 76.55 1209 reject_low 16 ALIGNMENT 0 YS2-1e24.p1k chr09 532 1041 391929 392128 F 510 0.00 1209 reject_low 8 ALIGNMENT 220 YS2-1e24.p1k chr09 217 737 391453 391963 F 521 84.64 1209|6,0 reject_low 5 ALIGNMENT 0 YS2-1e24.p1k chr09 62 451 390994 390993 F 390 0.00 1209 reject_low 34 ALIGNMENT 0 YS2-1e24.p1k chr09 228 228 392084 392093 F 1 0.00 1209 reject_low 13 ALIGNMENT 0 YS2-1e24.p1k chr09 223 222 391278 391458 F 0 0.00 1209 reject_low 5 ALIGNMENT 0 YS2-1e24.p1k chr09 873 895 391109 391086 F 23 0.00 1209 reject_low 41 ALIGNMENT 0 YS2-1e24.p1k chr09 223 222 391278 391503 F 0 0.00 1209 reject_low 10 ALIGNMENT 56 YS2-1e24.p1k chr09 875 961 391101 391189 F 87 90.80 1209 reject_low 32 ALIGNMENT 0 YS2-1e24.p1k chr09 228 227 391283 391714 F 0 0.00 1209 reject_low 23 ALIGNMENT 0 YS2-1e24.p1k chr09 522 1041 392045 392128 F 520 0.00 1209 reject_low 31 ALIGNMENT 92 YS2-1e24.p1k chr09 180 512 392000 392323 F 333 80.18 1209 reject_low 17 ALIGNMENT 0 YS2-1f03.q1k vc_5 672 530 5026 5025 C 143 0.00 1391 reject_low 15 ALIGNMENT 318 YS2-1f03.q1k vc_2 529 955 2164 2589 F 427 92.27 1391 reject_low 3 ALIGNMENT 0 YS2-1f03.q1k vc_5 672 527 2 1 C 146 0.00 1391 reject_low 18 ALIGNMENT 318 YS2-1f03.q1k vc_7 955 529 2302 2727 C 427 92.27 1391 reject_low 6 ALIGNMENT 0 YS2-1f03.q1k vc_1 62 528 2531 2530 F 467 0.00 1391 reject_low 2 ALIGNMENT 318 YS2-1f03.q1k vc_1 529 955 2531 2956 F 427 92.27 1391 reject_low 2 ALIGNMENT 0 YS2-1f03.q1k vc_7 62 491 13525 13524 F 430 0.00 1391 reject_low 17 ALIGNMENT 0 YS2-1f03.q1k vc_4 530 529 5872 6353 F 0 0.00 1391 reject_low 9 ALIGNMENT 0 YS2-1f03.q1k vc_4 62 528 126 125 F 467 0.00 1391 reject_low 8 ALIGNMENT 0 YS2-1f03.q1k vc_7 688 62 6412 6411 C 627 0.00 1391 reject_low 10 ALIGNMENT 0 YS2-1f03.q1k vc_4 672 618 1447 1446 C 55 0.00 1391 reject_low 11 ALIGNMENT 154 YS2-1f03.q1k vc_4 529 690 126 287 F 162 98.77 1391 reject_low 8 ALIGNMENT 0 YS2-1f03.q1k vc_5 490 62 5064 5063 C 429 0.00 1391 reject_low 15 ALIGNMENT 0 YS2-1f03.q1k vc_3 672 530 2473 2472 C 143 0.00 1391 reject_low 14 ALIGNMENT 38 YS2-1f03.q1k vc_7 492 529 63 100 F 38 100.00 1391 reject_low 16 ALIGNMENT 41 YS2-1f03.q1k vc_2 529 489 2105 2145 C 41 100.00 1391 reject_low 13 ALIGNMENT 0 YS2-1f03.q1k vc_4 528 62 5813 5812 C 467 0.00 1391 reject_low 7 ALIGNMENT 0 YS2-1f03.q1k vc_7 528 62 2728 2727 C 467 0.00 1391 reject_low 6 ALIGNMENT 0 YS2-1f03.q1k vc_7 739 740 5172 6360 C 0 0.00 1391 reject_low 10 ALIGNMENT 0 YS2-1f03.q1k vc_2 672 530 2106 2105 C 143 0.00 1391 reject_low 13 ALIGNMENT 0 YS2-1f03.q1k vc_5 62 528 2398 2397 F 467 0.00 1391 reject_low 5 ALIGNMENT 0 YS2-1f03.q1k vc_3 62 528 2531 2530 F 467 0.00 1391 reject_low 4 ALIGNMENT 42 YS2-1f03.q1k vc_7 740 689 6360 6411 C 52 94.23 1391|1,0 reject_low 10 ALIGNMENT 0 YS2-1f03.q1k vc_1 488 62 2513 2512 C 427 0.00 1391 reject_low 12 ALIGNMENT 0 YS2-1f03.q1k vc_3 488 62 2513 2512 C 427 0.00 1391 reject_low 14 ALIGNMENT 154 YS2-1f03.q1k vc_4 529 690 6353 6514 F 162 98.77 1391|1,0 reject_low 9 ALIGNMENT 41 YS2-1f03.q1k vc_1 529 489 2472 2512 C 41 100.00 1391 reject_low 12 ALIGNMENT 0 YS2-1f03.q1k vc_7 530 672 100 99 F 143 0.00 1391 reject_low 16 ALIGNMENT 0 YS2-1f03.q1k vc_2 488 62 2146 2145 C 427 0.00 1391 reject_low 13 ALIGNMENT 0 YS2-1f03.p1k chr12 490 508 855036 855035 F 19 0.00 508 accept_chi 0 ALIGNMENT 0 YS2-1f03.q1k vc_1 672 530 2473 2472 C 143 0.00 1391 reject_low 12 ALIGNMENT 0 YS2-1f03.q1k vc_4 62 488 5831 5830 F 427 0.00 1391 reject_low 9 ALIGNMENT 0 YS2-1f03.q1k vc_7 530 672 13562 13561 F 143 0.00 1391 reject_low 17 ALIGNMENT 39 YS2-1f03.q1k vc_5 529 491 5025 5063 C 39 100.00 1391 reject_low 15 ALIGNMENT 318 YS2-1f03.q1k vc_3 529 955 2531 2956 F 427 92.27 1391 reject_low 4 ALIGNMENT 318 YS2-1f03.q1k vc_5 529 955 2398 2823 F 427 92.27 1391 reject_low 5 ALIGNMENT 38 YS2-1f03.q1k vc_7 492 529 13525 13562 F 38 100.00 1391 reject_low 17 ALIGNMENT 0 YS2-1f03.q1k vc_4 528 62 1535 1534 C 467 0.00 1391 reject_low 11 ALIGNMENT 0 YS2-1f03.q1k vc_7 62 491 63 62 F 430 0.00 1391 reject_low 16 ALIGNMENT 36 YS2-1f03.q1k vc_5 526 491 1 36 C 36 100.00 1391 reject_low 18 ALIGNMENT 41 YS2-1f03.q1k vc_3 529 489 2472 2512 C 41 100.00 1391 reject_low 14 ALIGNMENT 84 YS2-1f03.q1k vc_4 617 529 1446 1534 C 89 98.88 1391 reject_low 11 ALIGNMENT 123 YS2-1f03.q1k vc_7 955 739 4957 5172 C 217 86.64 1391|0,1 reject_low 10 ALIGNMENT 427 YS2-1f03.p1k chr12 33 489 854580 855036 F 457 99.34 508 accept_chi 0 ALIGNMENT 0 YS2-1f03.q1k vc_2 62 528 2164 2163 F 467 0.00 1391 reject_low 3 ALIGNMENT 416 YS2-1f03.q1k chr12 489 33 854580 855036 C 457 98.69 1391 accept_chi 1 ALIGNMENT 0 YS2-1f03.q1k vc_5 490 62 37 36 C 429 0.00 1391 reject_low 18 ALIGNMENT 0 YS2-1f03.q1k chr12 672 490 854581 854580 C 183 0.00 1391 accept_chi 1 ALIGNMENT 41 YS2-1f03.q1k vc_4 489 529 5831 5871 F 41 100.00 1391 reject_low 9 ALIGNMENT 311 YS2-1f03.q1k vc_4 955 529 5385 5812 C 427 91.80 1391 reject_low 7 ALIGNMENT 831 YS2-1f04.q1k chr07 1053 30 195426 196449 C 1024 94.34 1362 accept 0 ALIGNMENT 1031 YS2-1f04.p1k chr07 38 1250 190182 191402 F 1213 95.63 1280 accept 0 ALIGNMENT 289 YS2-1f05.q1k vc_2 1 303 2322 2624 F 303 98.68 1031 reject_low 5 ALIGNMENT 48 YS2-1f05.q1k vc_7 54 3 6360 6411 C 52 98.08 1031|1,0 reject_low 7 ALIGNMENT 392 YS2-1f05.q1k vc_4 421 1 5232 5654 C 421 97.86 1031 reject_low 2 ALIGNMENT 289 YS2-1f05.q1k vc_1 1 303 2689 2991 F 303 98.68 1031 reject_low 4 ALIGNMENT 0 YS2-1f05.q1k vc_4 237 62 113 112 C 176 0.00 1031 reject_low 8 ALIGNMENT 0 YS2-1f05.q1k vc_7 304 304 4700 4921 C 1 0.00 1031 reject_low 7 ALIGNMENT 60 YS2-1f05.q1k vc_4 304 238 6273 6339 C 67 97.01 1031 reject_low 9 ALIGNMENT 580 YS2-1f05.q1k vc_7 774 1 1787 2569 C 774 92.38 1031 reject_vc 0 ALIGNMENT 238 YS2-1f05.q1k vc_7 303 53 4922 5172 C 251 98.41 1031|0,1 reject_low 7 ALIGNMENT 60 YS2-1f05.q1k vc_4 238 304 1548 1614 F 67 97.01 1031 reject_low 3 ALIGNMENT 580 YS2-1f05.q1k vc_5 1 770 2556 3333 F 770 92.47 1031 reject_vc 1 ALIGNMENT 0 YS2-1f05.q1k vc_4 62 237 1548 1547 F 176 0.00 1031 reject_low 3 ALIGNMENT 0 YS2-1f05.q1k vc_4 305 307 1615 1878 F 3 0.00 1031 reject_low 3 ALIGNMENT 60 YS2-1f05.q1k vc_4 304 238 46 112 C 67 97.01 1031 reject_low 8 ALIGNMENT 283 YS2-1f05.q1k vc_4 308 770 1879 2349 F 463 88.12 1031 reject_low 3 ALIGNMENT 0 YS2-1f05.q1k vc_7 53 54 5172 6360 C 0 0.00 1031 reject_low 7 ALIGNMENT 106 YS2-1f05.q1k vc_7 421 305 4583 4699 C 117 97.44 1031 reject_low 7 ALIGNMENT 289 YS2-1f05.q1k vc_3 1 303 2689 2991 F 303 98.68 1031 reject_low 6 ALIGNMENT 0 YS2-1f05.q1k vc_4 237 62 6340 6339 C 176 0.00 1031 reject_low 9 ALIGNMENT 1028 YS2-1f07.p1k chr06 1259 30 248428 249670 C 1230 95.53 1277 accept 0 ALIGNMENT 850 YS2-1f07.q1k chr06 35 1034 244312 245312 F 1000 95.70 1289 accept 0 ALIGNMENT 772 YS2-1f09.q1k chr16 981 26 181193 182138 C 956 95.08 1475 accept_chi 1 ALIGNMENT 918 YS2-1f09.p1k chr03 34 1110 139435 140531 F 1077 97.21 1284 accept_chi 0 ALIGNMENT 202 YS2-1f10.p1k chr16 269 33 619430 619667 C 237 96.62 276 accept 0 ALIGNMENT 193 YS2-1f11.p1k vc_2 1262 922 1757 2105 C 341 85.63 1537 reject_low 2 ALIGNMENT 0 YS2-1f11.p1k vc_2 921 62 2106 2105 C 860 0.00 1537 reject_low 2 ALIGNMENT 193 YS2-1f11.p1k vc_1 1262 922 1757 2105 C 341 85.63 1537 reject_low 1 ALIGNMENT 0 YS2-1f11.p1k vc_3 921 62 2473 2472 C 860 0.00 1537 reject_low 9 ALIGNMENT 0 YS2-1f11.p1k vc_1 921 62 2106 2105 C 860 0.00 1537 reject_low 1 ALIGNMENT 193 YS2-1f11.p1k vc_3 1262 922 1757 2105 C 341 85.63 1537 reject_low 3 ALIGNMENT 193 YS2-1f11.p1k vc_7 922 1262 100 448 F 341 85.63 1537 reject_low 6 ALIGNMENT 193 YS2-1f11.p1k vc_7 922 1262 13562 13910 F 341 85.63 1537 reject_low 7 ALIGNMENT 0 YS2-1f11.p1k vc_7 62 921 13562 13561 F 860 0.00 1537 reject_low 7 ALIGNMENT 765 YS2-1f11.q1k chr15 892 24 435532 436400 C 869 97.47 1468 accept 0 ALIGNMENT 193 YS2-1f11.p1k vc_4 922 1262 5871 6219 F 341 85.63 1537 reject_low 4 ALIGNMENT 0 YS2-1f11.p1k vc_3 921 62 2106 2105 C 860 0.00 1537 reject_low 3 ALIGNMENT 28 YS2-1f11.p1k vc_3 955 922 2438 2472 C 34 94.12 1537 reject_low 9 ALIGNMENT 193 YS2-1f11.p1k vc_5 1262 922 4677 5025 C 341 85.63 1537 reject_low 5 ALIGNMENT 28 YS2-1f11.p1k vc_1 955 922 2438 2472 C 34 94.12 1537 reject_low 8 ALIGNMENT 803 YS2-1f11.p1k chr15 34 892 435530 436389 F 859 99.07 1537 accept 0 ALIGNMENT 0 YS2-1f11.p1k vc_7 62 921 100 99 F 860 0.00 1537 reject_low 6 ALIGNMENT 0 YS2-1f11.p1k vc_5 921 62 5026 5025 C 860 0.00 1537 reject_low 5 ALIGNMENT 0 YS2-1f11.p1k vc_4 62 921 5871 5870 F 860 0.00 1537 reject_low 4 ALIGNMENT 0 YS2-1f11.p1k vc_1 921 62 2473 2472 C 860 0.00 1537 reject_low 8 ALIGNMENT 949 YS2-1f12.p1k chr12 33 1135 138168 139278 F 1103 96.55 1489 accept 0 ALIGNMENT 898 YS2-1f12.q1k chr12 1196 27 141765 142937 C 1170 93.85 1388 accept 0 ALIGNMENT 0 YS2-1f13.p1k vc_5 943 62 5026 5025 C 882 0.00 1289 reject_low 7 ALIGNMENT 0 YS2-1f13.p1k vc_1 943 62 2473 2472 C 882 0.00 1289 reject_low 15 ALIGNMENT 0 YS2-1f13.p1k chr06 502 62 31730 31729 C 441 0.00 1289 reject_low 10 ALIGNMENT 134 YS2-1f13.p1k vc_7 944 1165 13562 13798 F 222 88.74 1289 reject_low 9 ALIGNMENT 26 YS2-1f13.p1k vc_3 974 944 2441 2472 C 31 96.77 1289 reject_low 16 ALIGNMENT 773 YS2-1f13.q1k chr12 912 28 467977 468861 C 885 97.63 1377 accept 0 ALIGNMENT 0 YS2-1f13.p1k vc_7 62 943 100 99 F 882 0.00 1289 reject_low 8 ALIGNMENT 39 YS2-1f13.q1k chr12 75 28 472464 472513 C 48 95.83 1377 reject_low 1 ALIGNMENT 0 YS2-1f13.q1k chr12 703 76 472465 472464 C 628 0.00 1377 reject_low 1 ALIGNMENT 0 YS2-1f13.q1k chr06 62 334 31622 31621 F 273 0.00 1377 reject_low 11 ALIGNMENT 39 YS2-1f13.q1k chr12 75 28 485696 485745 C 48 95.83 1377 reject_low 13 ALIGNMENT 801 YS2-1f13.p1k chr12 37 926 458842 459728 F 890 98.31 1289 accept 0 ALIGNMENT 0 YS2-1f13.p1k vc_1 943 62 2106 2105 C 882 0.00 1289 reject_low 3 ALIGNMENT 773 YS2-1f13.q1k chr12 912 28 458840 459724 C 885 97.63 1377 reject_low 2 ALIGNMENT 88 YS2-1f13.q1k chr06 335 442 31622 31729 F 108 96.30 1377 reject_low 11 ALIGNMENT 134 YS2-1f13.p1k vc_3 1165 944 1869 2105 C 222 88.74 1289 reject_low 5 ALIGNMENT 801 YS2-1f13.p1k chr12 37 926 467979 468865 F 890 98.31 1289 reject_low 1 ALIGNMENT 0 YS2-1f13.p1k chr06 834 611 31623 31622 C 224 0.00 1289 reject_low 10 ALIGNMENT 134 YS2-1f13.p1k vc_7 944 1165 100 336 F 222 88.74 1289 reject_low 8 ALIGNMENT 0 YS2-1f13.q1k chr12 703 76 482045 482044 C 628 0.00 1377 reject_low 12 ALIGNMENT 0 YS2-1f13.q1k chr12 703 76 485697 485696 C 628 0.00 1377 reject_low 13 ALIGNMENT 39 YS2-1f13.q1k chr12 75 28 482044 482093 C 48 95.83 1377 reject_low 12 ALIGNMENT 26 YS2-1f13.p1k vc_1 974 944 2441 2472 C 31 96.77 1289 reject_low 15 ALIGNMENT 0 YS2-1f13.p1k vc_3 943 62 2473 2472 C 882 0.00 1289 reject_low 16 ALIGNMENT 0 YS2-1f13.p1k vc_3 943 62 2106 2105 C 882 0.00 1289 reject_low 5 ALIGNMENT 0 YS2-1f13.q1k chr12 703 76 489349 489348 C 628 0.00 1377 reject_low 14 ALIGNMENT 94 YS2-1f13.p1k chr06 610 503 31622 31729 C 108 98.15 1289 reject_low 10 ALIGNMENT 134 YS2-1f13.p1k vc_5 1165 944 4789 5025 C 222 88.74 1289 reject_low 7 ALIGNMENT 39 YS2-1f13.q1k chr12 75 28 489348 489397 C 48 95.83 1377 reject_low 14 ALIGNMENT 0 YS2-1f13.p1k vc_2 943 62 2106 2105 C 882 0.00 1289 reject_low 4 ALIGNMENT 0 YS2-1f13.p1k vc_7 62 943 13562 13561 F 882 0.00 1289 reject_low 9 ALIGNMENT 0 YS2-1f13.p1k vc_4 62 943 5871 5870 F 882 0.00 1289 reject_low 6 ALIGNMENT 0 YS2-1f13.q1k chr06 443 703 31729 31728 F 261 0.00 1377 reject_low 11 ALIGNMENT 134 YS2-1f13.p1k vc_1 1165 944 1869 2105 C 222 88.74 1289 reject_low 3 ALIGNMENT 134 YS2-1f13.p1k vc_4 944 1165 5871 6107 F 222 88.74 1289 reject_low 6 ALIGNMENT 134 YS2-1f13.p1k vc_2 1165 944 1869 2105 C 222 88.74 1289 reject_low 4 ALIGNMENT 941 YS2-1f16.p1k chr13 34 1128 426126 427223 F 1095 96.71 1426 accept 0 ALIGNMENT 891 YS2-1f16.q1k chr13 1091 27 430436 431519 C 1065 96.15 1377 accept 0 ALIGNMENT 955 YS2-1f17.p1k chr15 34 1164 85165 86301 F 1131 96.55 1244 accept 0 ALIGNMENT 862 YS2-1f17.q1k chr15 1167 33 86530 87650 C 1135 94.10 1387 accept 0 ALIGNMENT 948 YS2-1f18.p1k chr13 1204 29 686412 687603 C 1176 94.90 1260 accept 0 ALIGNMENT 868 YS2-1f18.q1k chr13 29 1099 683134 684192 F 1071 94.86 1391 accept 0 ALIGNMENT 39 YS2-1f19.q1k vc_5 310 272 5025 5063 C 39 100.00 310 reject_low 6 ALIGNMENT 0 YS2-1f19.p1k chr04 268 285 923765 923764 F 18 0.00 285 accept_chi 1 ALIGNMENT 220 YS2-1f19.q1k chr04 269 31 923529 923765 C 239 98.74 310 accept_chi 0 ALIGNMENT 38 YS2-1f19.q1k vc_7 273 310 13525 13562 F 38 100.00 310 reject_low 7 ALIGNMENT 41 YS2-1f19.q1k vc_2 310 270 2105 2145 C 41 100.00 310 reject_low 3 ALIGNMENT 0 YS2-1f19.q1k chr04 310 270 923530 923529 C 41 0.00 310 accept_chi 0 ALIGNMENT 0 YS2-1f19.q1k vc_5 271 62 5064 5063 C 210 0.00 310 reject_low 6 ALIGNMENT 36 YS2-1f19.q1k vc_5 307 272 1 36 C 36 100.00 310 reject_low 8 ALIGNMENT 41 YS2-1f19.q1k vc_1 310 270 2472 2512 C 41 100.00 310 reject_low 2 ALIGNMENT 0 YS2-1f19.q1k vc_7 62 272 13525 13524 F 211 0.00 310 reject_low 7 ALIGNMENT 0 YS2-1f19.q1k vc_5 271 62 37 36 C 210 0.00 310 reject_low 8 ALIGNMENT 0 YS2-1f19.q1k vc_1 269 62 2513 2512 C 208 0.00 310 reject_low 2 ALIGNMENT 0 YS2-1f19.q1k vc_4 62 269 5831 5830 F 208 0.00 310 reject_low 5 ALIGNMENT 0 YS2-1f19.q1k vc_3 269 62 2513 2512 C 208 0.00 310 reject_low 4 ALIGNMENT 41 YS2-1f19.q1k vc_3 310 270 2472 2512 C 41 100.00 310 reject_low 4 ALIGNMENT 41 YS2-1f19.q1k vc_4 270 310 5831 5871 F 41 100.00 310 reject_low 5 ALIGNMENT 0 YS2-1f19.q1k vc_2 269 62 2146 2145 C 208 0.00 310 reject_low 3 ALIGNMENT 218 YS2-1f19.p1k chr04 33 267 923529 923765 F 235 98.72 285 accept_chi 1 ALIGNMENT 220 YS2-1f20.p1k chr03 420 658 90437 90675 F 239 100.00 658 reject_low 17 ALIGNMENT 36 YS2-1f20.p1k chr06 39 140 138132 138229 F 102 82.35 658 reject_low 52 ALIGNMENT 0 YS2-1f20.p1k chr08 658 144 389188 389187 C 515 0.00 658 reject_low 36 ALIGNMENT 44 YS2-1f20.p1k chr09 39 141 246441 246540 F 103 84.47 658 reject_low 39 ALIGNMENT 0 YS2-1f20.p1k chr10 141 658 538338 538337 F 518 0.00 658 reject_low 49 ALIGNMENT 37 YS2-1f20.p1k chr09 471 570 324880 324980 F 100 82.00 658 reject_low 40 ALIGNMENT 217 YS2-1f20.p1k chr05 420 658 487829 488067 F 239 99.58 658 reject_low 23 ALIGNMENT 152 YS2-1f20.p1k chr01 658 420 160334 160575 C 239 90.79 658 reject_low 55 ALIGNMENT 0 YS2-1f20.p1k chr04 62 470 992651 992650 F 409 0.00 658 reject_low 47 ALIGNMENT 74 YS2-1f20.p1k chr14 39 152 524954 525065 F 114 91.23 658 reject_low 29 ALIGNMENT 220 YS2-1f20.p1k chr10 658 416 203797 204039 C 243 99.59 658 reject_low 14 ALIGNMENT 770 YS2-1f20.q1k chr14 25 950 566355 567284 F 926 96.11 1281 reject_low 6 ALIGNMENT 0 YS2-1f20.p1k chr06 578 658 137807 137806 F 81 0.00 658 reject_low 38 ALIGNMENT 751 YS2-1f20.q1k chr02 956 25 30342 31278 C 932 95.28 1281 reject_low 8 ALIGNMENT 217 YS2-1f20.p1k chr04 658 420 645592 645830 C 239 99.58 658 reject_low 51 ALIGNMENT 0 YS2-1f20.p1k chr09 142 658 246540 246539 F 517 0.00 658 reject_low 39 ALIGNMENT 0 YS2-1f20.p1k chr10 66 658 204230 204229 F 593 0.00 658 reject_low 46 ALIGNMENT 0 YS2-1f20.p1k chr13 658 146 168355 168354 C 513 0.00 658 reject_low 37 ALIGNMENT 78 YS2-1f20.p1k chr01 150 36 165827 165939 C 115 92.17 658 reject_low 55 ALIGNMENT 789 YS2-1f20.q1k chr07 25 996 573067 574046 F 972 95.47 1281 reject_low 4 ALIGNMENT 42 YS2-1f20.p1k chr10 570 453 537832 537948 C 118 81.36 658 reject_low 35 ALIGNMENT 0 YS2-1f20.p1k chr05 62 419 487829 487828 F 358 0.00 658 reject_low 23 ALIGNMENT 0 YS2-1f20.p1k chr10 658 144 203712 203711 C 515 0.00 658 reject_low 42 ALIGNMENT 0 YS2-1f20.p1k chr04 418 62 519645 519644 C 357 0.00 658 reject_low 2 ALIGNMENT 733 YS2-1f20.q1k chr12 25 956 980059 980995 F 932 94.64 1281 reject_low 11 ALIGNMENT 78 YS2-1f20.p1k chr01 150 36 160239 160351 C 115 92.17 658 reject_low 28 ALIGNMENT 27 YS2-1f20.p1k chr04 200 158 651096 651138 C 43 90.70 658 reject_low 27 ALIGNMENT 220 YS2-1f20.p1k chr13 658 416 168443 168685 C 243 99.59 658 reject_low 15 ALIGNMENT 27 YS2-1f20.p1k chr04 200 158 645512 645554 C 43 90.70 658 reject_low 26 ALIGNMENT 220 YS2-1f20.p1k chr09 420 658 246217 246455 F 239 100.00 658 reject_low 19 ALIGNMENT 777 YS2-1f20.q1k chr12 942 25 941906 942826 C 918 96.62 1281 reject_low 3 ALIGNMENT 33 YS2-1f20.p1k chr12 39 140 941413 941510 F 102 81.37 658 reject_low 54 ALIGNMENT 27 YS2-1f20.p1k chr10 36 65 204201 204230 F 30 96.67 658 reject_low 46 ALIGNMENT 0 YS2-1f20.p1k chr08 419 62 389513 389512 C 358 0.00 658 reject_low 18 ALIGNMENT 0 YS2-1f20.p1k chr01 658 151 160240 160239 C 508 0.00 658 reject_low 28 ALIGNMENT 0 YS2-1f20.p1k chr01 419 62 166164 166163 C 358 0.00 658 reject_low 25 ALIGNMENT 220 YS2-1f20.p1k chr12 420 658 946816 947054 F 239 100.00 658 reject_low 54 ALIGNMENT 0 YS2-1f20.p1k chr03 141 658 90758 90757 F 518 0.00 658 reject_low 48 ALIGNMENT 0 YS2-1f20.p1k chr04 658 151 992304 992303 C 508 0.00 658 reject_low 30 ALIGNMENT 33 YS2-1f20.p1k chr03 39 140 90661 90758 F 102 81.37 658 reject_low 48 ALIGNMENT 0 YS2-1f20.p1k chr09 62 419 246217 246216 F 358 0.00 658 reject_low 19 ALIGNMENT 0 YS2-1f20.p1k chr09 420 658 325431 325430 F 239 0.00 658 accept 0 ALIGNMENT 768 YS2-1f20.q1k chr06 996 25 138566 139545 C 972 94.75 1281 reject_low 5 ALIGNMENT 0 YS2-1f20.p1k chr01 419 151 160576 165826 C 269 0.00 658 reject_low 55 ALIGNMENT 0 YS2-1f20.p1k chr12 62 418 941188 941187 F 357 0.00 658 reject_low 3 ALIGNMENT 738 YS2-1f20.q1k chr15 25 924 708386 709287 F 900 95.67 1281 reject_low 12 ALIGNMENT 0 YS2-1f20.p1k chr09 62 470 324880 324879 F 409 0.00 658 reject_low 40 ALIGNMENT 0 YS2-1f20.p1k chr06 141 419 138230 143534 F 279 0.00 658 reject_low 52 ALIGNMENT 0 YS2-1f20.p1k chr10 142 658 541001 541000 F 517 0.00 658 reject_low 34 ALIGNMENT 0 YS2-1f20.p1k chr09 571 658 324980 324979 F 88 0.00 658 reject_low 40 ALIGNMENT 28 YS2-1f20.p1k chr06 36 82 137861 137907 F 47 87.23 658|0,2 reject_low 5,56 ALIGNMENT 0 YS2-1f20.p1k chr04 658 144 519320 519319 C 515 0.00 658 reject_low 41 ALIGNMENT 0 YS2-1f20.p1k chr04 419 131 645831 651100 C 289 0.00 658 reject_low 51 ALIGNMENT 72 YS2-1f20.p1k chr14 39 150 519388 519497 F 112 91.07 658 reject_low 45 ALIGNMENT 750 YS2-1f20.q1k chr04 951 25 981872 982802 C 927 95.36 1281 reject_low 9 ALIGNMENT 218 YS2-1f20.p1k chr04 658 419 992398 992637 C 240 99.58 658 reject_low 22 ALIGNMENT 36 YS2-1f20.p1k chr07 39 140 811676 811773 F 102 82.35 658 reject_low 44 ALIGNMENT 0 YS2-1f20.p1k chr04 415 130 651419 651684 C 286 0.00 658 reject_low 53 ALIGNMENT 33 YS2-1f20.p1k chr10 39 140 538241 538338 F 102 81.37 658 reject_low 49 ALIGNMENT 31 YS2-1f20.p1k chr04 471 555 992651 992736 F 85 81.18 658 reject_low 47 ALIGNMENT 221 YS2-1f20.p1k chr10 419 658 538016 538255 F 240 100.00 658 reject_low 16 ALIGNMENT 777 YS2-1f20.q1k chr04 25 951 518006 518936 F 927 96.33 1281 reject_low 2 ALIGNMENT 373 YS2-1f20.p1k chr09 36 419 325048 325431 F 384 100.00 658 accept 0 ALIGNMENT 53 YS2-1f20.p1k chr10 44 141 540906 541001 F 98 87.76 658 reject_low 34 ALIGNMENT 761 YS2-1f20.q1k chr03 950 25 85518 86447 C 926 95.79 1281 reject_low 7 ALIGNMENT 0 YS2-1f20.p1k chr14 151 419 519498 524729 F 269 0.00 658 reject_low 45 ALIGNMENT 57 YS2-1f20.p1k chr04 130 39 645517 645606 C 92 90.22 658 reject_low 33 ALIGNMENT 0 YS2-1f20.p1k chr10 62 418 538016 538015 F 357 0.00 658 reject_low 16 ALIGNMENT 0 YS2-1f20.p1k chr03 62 419 90437 90436 F 358 0.00 658 reject_low 17 ALIGNMENT 0 YS2-1f20.p1k chr12 419 62 976586 976585 C 358 0.00 658 reject_low 21 ALIGNMENT 36 YS2-1f20.p1k chr06 78 160 143867 143947 F 83 86.75 658|3,0 reject_low 56 ALIGNMENT 220 YS2-1f20.p1k chr10 658 420 541103 541341 C 239 100.00 658 reject_low 20 ALIGNMENT 69 YS2-1f20.p1k chr04 150 39 992303 992412 C 112 90.18 658 reject_low 30 ALIGNMENT 46 YS2-1f20.p1k chr08 143 39 389187 389288 C 105 84.76 658 reject_low 36 ALIGNMENT 41 YS2-1f20.p1k chr04 143 39 519319 519419 C 105 83.81 658 reject_low 41 ALIGNMENT 32 YS2-1f20.p1k chr06 39 195 143759 143917 F 157 78.98 658 reject_low 31 ALIGNMENT 0 YS2-1f20.p1k chr12 141 419 941511 946815 F 279 0.00 658 reject_low 54 ALIGNMENT 0 YS2-1f20.p1k chr06 83 419 137908 137907 F 337 0.00 658 reject_low 5 ALIGNMENT 28 YS2-1f20.p1k chr04 129 68 651685 651744 C 62 87.10 658 reject_low 53 ALIGNMENT 45 YS2-1f20.p1k chr13 145 39 168354 168457 C 107 84.11 658 reject_low 37 ALIGNMENT 0 YS2-1f20.p1k chr06 81 80 137906 143869 F 0 0.00 658 reject_low 56 ALIGNMENT 0 YS2-1f20.p1k chr04 556 658 992736 992735 F 103 0.00 658 reject_low 47 ALIGNMENT 217 YS2-1f20.p1k chr04 658 416 651176 651418 C 243 99.18 658 reject_low 53 ALIGNMENT 220 YS2-1f20.p1k chr06 420 658 137908 138146 F 239 100.00 658 reject_low 5 ALIGNMENT 0 YS2-1f20.p1k chr04 658 131 645518 645517 C 528 0.00 658 reject_low 33 ALIGNMENT 0 YS2-1f20.p1k chr14 62 418 519163 519162 F 357 0.00 658 reject_low 24 ALIGNMENT 0 YS2-1f20.p1k chr06 62 486 137718 137717 F 425 0.00 658 reject_low 38 ALIGNMENT 0 YS2-1f20.p1k chr07 62 417 811450 811449 F 356 0.00 658 reject_low 1 ALIGNMENT 0 YS2-1f20.p1k chr06 196 658 143917 143916 F 463 0.00 658 reject_low 31 ALIGNMENT 0 YS2-1f20.p1k chr10 452 62 537949 537948 C 391 0.00 658 reject_low 35 ALIGNMENT 0 YS2-1f20.p1k chr13 415 62 168686 168685 C 354 0.00 658 reject_low 15 ALIGNMENT 733 YS2-1f20.q1k chr04 956 25 872517 873453 C 932 94.64 1281 reject_low 10 ALIGNMENT 0 YS2-1f20.p1k chr12 141 658 947137 947136 F 518 0.00 658 reject_low 50 ALIGNMENT 721 YS2-1f20.q1k chr15 956 25 970983 971919 C 932 94.21 1281 reject_low 13 ALIGNMENT 0 YS2-1f20.p1k chr10 419 62 541342 541341 C 358 0.00 658 reject_low 20 ALIGNMENT 43 YS2-1f20.p1k chr10 474 658 204036 204218 F 185 78.92 658 reject_low 32 ALIGNMENT 220 YS2-1f20.p1k chr08 658 420 389274 389512 C 239 100.00 658 reject_low 18 ALIGNMENT 0 YS2-1f20.p1k chr04 658 201 645513 645512 C 458 0.00 658 reject_low 26 ALIGNMENT 0 YS2-1f20.p1k chr12 658 141 976265 976264 C 518 0.00 658 reject_low 43 ALIGNMENT 57 YS2-1f20.p1k chr04 130 39 651101 651190 C 92 90.22 658 reject_low 51 ALIGNMENT 222 YS2-1f20.p1k chr07 418 658 811450 811690 F 241 100.00 658 reject_low 1 ALIGNMENT 221 YS2-1f20.p1k chr12 419 658 941188 941427 F 240 100.00 658 reject_low 3 ALIGNMENT 221 YS2-1f20.p1k chr04 658 419 519405 519644 C 240 100.00 658 reject_low 2 ALIGNMENT 212 YS2-1f20.p1k chr14 419 658 519163 519402 F 240 98.75 658 reject_low 24 ALIGNMENT 0 YS2-1f20.p1k chr10 415 62 204040 204039 C 354 0.00 658 reject_low 14 ALIGNMENT 0 YS2-1f20.p1k chr04 658 201 651097 651096 C 458 0.00 658 reject_low 27 ALIGNMENT 33 YS2-1f20.p1k chr12 39 140 947040 947137 F 102 81.37 658 reject_low 50 ALIGNMENT 220 YS2-1f20.p1k chr06 420 658 143535 143773 F 239 100.00 658 reject_low 52 ALIGNMENT 768 YS2-1f20.q1k chr07 996 25 812110 813089 C 972 94.75 1281 reject_low 1 ALIGNMENT 220 YS2-1f20.p1k chr12 658 420 976347 976585 C 239 100.00 658 reject_low 21 ALIGNMENT 0 YS2-1f20.p1k chr10 62 473 204036 204035 F 412 0.00 658 reject_low 32 ALIGNMENT 0 YS2-1f20.p1k chr04 418 62 992638 992637 C 357 0.00 658 reject_low 22 ALIGNMENT 0 YS2-1f20.p1k chr04 157 62 651139 651138 C 96 0.00 658 reject_low 27 ALIGNMENT 0 YS2-1f20.p1k chr14 153 658 525065 525064 F 506 0.00 658 reject_low 29 ALIGNMENT 211 YS2-1f20.p1k chr14 420 658 524730 524968 F 239 98.74 658 reject_low 45 ALIGNMENT 0 YS2-1f20.p1k chr04 157 62 645555 645554 C 96 0.00 658 reject_low 26 ALIGNMENT 41 YS2-1f20.p1k chr10 143 39 203711 203811 C 105 83.81 658 reject_low 42 ALIGNMENT 0 YS2-1f20.p1k chr06 161 658 143947 143946 F 498 0.00 658 reject_low 56 ALIGNMENT 39 YS2-1f20.p1k chr12 140 39 976264 976361 C 102 83.33 658 reject_low 43 ALIGNMENT 0 YS2-1f20.p1k chr10 658 571 537833 537832 C 88 0.00 658 reject_low 35 ALIGNMENT 39 YS2-1f20.p1k chr06 487 577 137718 137807 F 91 84.62 658 reject_low 38 ALIGNMENT 0 YS2-1f20.p1k chr07 141 658 811773 811772 F 518 0.00 658 reject_low 44 ALIGNMENT 152 YS2-1f20.p1k chr01 658 420 165922 166163 C 239 90.79 658 reject_low 25 ALIGNMENT 966 YS2-1f21.p1k chr05 29 1152 402119 403239 F 1124 96.35 1280 accept 0 ALIGNMENT 0 YS2-1f21.q1k chr14 62 524 344386 344385 F 463 0.00 1350 reject_low 1 ALIGNMENT 70 YS2-1f21.q1k chr14 525 766 344386 344627 F 242 76.86 1350 reject_low 1 ALIGNMENT 766 YS2-1f21.q1k chr05 970 31 405181 406109 C 940 95.85 1350 accept 0 ALIGNMENT 849 YS2-1f23.q1k chr02 33 1120 445616 446677 F 1088 95.13 1428 accept 0 ALIGNMENT 889 YS2-1f23.p1k chr02 1086 33 445636 446697 C 1054 96.20 1236 accept 0 ALIGNMENT 270 YS2-1f24.q1k chr05 401 94 553314 553619 C 308 96.75 1519 accept 0 ALIGNMENT 1006 YS2-1f24.p1k chr05 32 1248 548892 550108 F 1217 95.40 1258 accept 0 ALIGNMENT 890 YS2-1g02.p1k chr15 1116 32 90612 91703 C 1085 94.93 1290 accept 0 ALIGNMENT 946 YS2-1g02.q1k chr15 33 1182 87324 88470 F 1150 95.57 1341 accept 0 ALIGNMENT 0 YS2-1g04.q1k vc_7 773 62 6412 6411 C 712 0.00 1445 reject_low 10 ALIGNMENT 0 YS2-1g04.q1k vc_5 62 613 2398 2397 F 552 0.00 1445 reject_low 5 ALIGNMENT 0 YS2-1g04.q1k vc_1 697 615 2473 2472 C 83 0.00 1445 reject_low 12 ALIGNMENT 286 YS2-1g04.q1k vc_4 1021 614 5408 5812 C 408 91.42 1445 reject_low 7 ALIGNMENT 38 YS2-1g04.q1k vc_7 577 614 63 100 F 38 100.00 1445 reject_low 16 ALIGNMENT 0 YS2-1g04.q1k vc_5 575 62 37 36 C 514 0.00 1445 reject_low 18 ALIGNMENT 500 YS2-1g04.p1k chr15 574 34 90114 90655 C 541 98.15 593 accept_chi 0 ALIGNMENT 0 YS2-1g04.q1k vc_2 697 615 2106 2105 C 83 0.00 1445 reject_low 13 ALIGNMENT 41 YS2-1g04.q1k vc_1 614 574 2472 2512 C 41 100.00 1445 reject_low 12 ALIGNMENT 0 YS2-1g04.q1k vc_4 613 62 5813 5812 C 552 0.00 1445 reject_low 7 ALIGNMENT 38 YS2-1g04.q1k vc_7 577 614 13525 13562 F 38 100.00 1445 reject_low 17 ALIGNMENT 495 YS2-1g04.q1k chr15 31 573 90114 90655 F 543 97.79 1445 accept_chi 1 ALIGNMENT 0 YS2-1g04.q1k vc_3 573 62 2513 2512 C 512 0.00 1445 reject_low 14 ALIGNMENT 41 YS2-1g04.q1k vc_4 574 614 5831 5871 F 41 100.00 1445 reject_low 9 ALIGNMENT 39 YS2-1g04.q1k vc_5 614 576 5025 5063 C 39 100.00 1445 reject_low 15 ALIGNMENT 0 YS2-1g04.q1k chr15 574 697 90655 90654 F 124 0.00 1445 accept_chi 1 ALIGNMENT 0 YS2-1g04.q1k vc_1 573 62 2513 2512 C 512 0.00 1445 reject_low 12 ALIGNMENT 0 YS2-1g04.q1k vc_5 575 62 5064 5063 C 514 0.00 1445 reject_low 15 ALIGNMENT 93 YS2-1g04.q1k vc_7 1021 823 4980 5172 C 199 84.42 1445|0,1 reject_low 10 ALIGNMENT 0 YS2-1g04.q1k vc_7 823 824 5172 6360 C 0 0.00 1445 reject_low 10 ALIGNMENT 0 YS2-1g04.q1k vc_4 62 573 5831 5830 F 512 0.00 1445 reject_low 9 ALIGNMENT 0 YS2-1g04.q1k vc_7 615 697 100 99 F 83 0.00 1445 reject_low 16 ALIGNMENT 41 YS2-1g04.q1k vc_3 614 574 2472 2512 C 41 100.00 1445 reject_low 14 ALIGNMENT 293 YS2-1g04.q1k vc_1 614 1021 2531 2933 F 408 91.91 1445 reject_low 2 ALIGNMENT 0 YS2-1g04.p1k chr15 593 575 90115 90114 C 19 0.00 593 accept_chi 0 ALIGNMENT 0 YS2-1g04.q1k vc_7 615 697 13562 13561 F 83 0.00 1445 reject_low 17 ALIGNMENT 293 YS2-1g04.q1k vc_3 614 1021 2531 2933 F 408 91.91 1445 reject_low 4 ALIGNMENT 0 YS2-1g04.q1k vc_3 697 615 2473 2472 C 83 0.00 1445 reject_low 14 ALIGNMENT 0 YS2-1g04.q1k vc_2 573 62 2146 2145 C 512 0.00 1445 reject_low 13 ALIGNMENT 36 YS2-1g04.q1k vc_5 611 576 1 36 C 36 100.00 1445 reject_low 18 ALIGNMENT 157 YS2-1g04.q1k vc_4 614 775 6353 6514 F 162 99.38 1445|1,0 reject_low 9 ALIGNMENT 157 YS2-1g04.q1k vc_4 614 775 126 287 F 162 99.38 1445 reject_low 8 ALIGNMENT 293 YS2-1g04.q1k vc_2 614 1021 2164 2566 F 408 91.91 1445 reject_low 3 ALIGNMENT 0 YS2-1g04.q1k vc_7 62 576 13525 13524 F 515 0.00 1445 reject_low 17 ALIGNMENT 0 YS2-1g04.q1k vc_5 697 612 2 1 C 86 0.00 1445 reject_low 18 ALIGNMENT 0 YS2-1g04.q1k vc_2 62 613 2164 2163 F 552 0.00 1445 reject_low 3 ALIGNMENT 0 YS2-1g04.q1k vc_5 697 615 5026 5025 C 83 0.00 1445 reject_low 15 ALIGNMENT 42 YS2-1g04.q1k vc_7 824 774 6360 6411 C 51 96.08 1445|1,0 reject_low 10 ALIGNMENT 293 YS2-1g04.q1k vc_7 1021 614 2325 2727 C 408 91.91 1445 reject_low 6 ALIGNMENT 0 YS2-1g04.q1k vc_7 613 62 2728 2727 C 552 0.00 1445 reject_low 6 ALIGNMENT 41 YS2-1g04.q1k vc_2 614 574 2105 2145 C 41 100.00 1445 reject_low 13 ALIGNMENT 0 YS2-1g04.q1k vc_4 613 62 1535 1534 C 552 0.00 1445 reject_low 11 ALIGNMENT 0 YS2-1g04.q1k vc_1 62 613 2531 2530 F 552 0.00 1445 reject_low 2 ALIGNMENT 87 YS2-1g04.q1k vc_4 702 614 1446 1534 C 89 100.00 1445 reject_low 11 ALIGNMENT 0 YS2-1g04.q1k vc_3 62 613 2531 2530 F 552 0.00 1445 reject_low 4 ALIGNMENT 0 YS2-1g04.q1k vc_4 62 613 126 125 F 552 0.00 1445 reject_low 8 ALIGNMENT 0 YS2-1g04.q1k vc_7 62 576 63 62 F 515 0.00 1445 reject_low 16 ALIGNMENT 293 YS2-1g04.q1k vc_5 614 1021 2398 2800 F 408 91.91 1445 reject_low 5 ALIGNMENT 0 YS2-1g04.q1k vc_4 615 614 5872 6353 F 0 0.00 1445 reject_low 9 ALIGNMENT 996 YS2-1g05.p1k chr04 1205 38 751539 752719 C 1168 96.23 1212 accept 0 ALIGNMENT 827 YS2-1g05.q1k chr04 28 1060 748210 749245 F 1033 95.45 1355 accept 0 ALIGNMENT 288 YS2-1g06.p1k vc_1 422 1 1326 1749 C 422 89.81 530 reject_low 2 ALIGNMENT 264 YS2-1g06.q1k vc_2 1 302 2322 2623 F 302 96.03 872 reject_low 9 ALIGNMENT 264 YS2-1g06.q1k vc_1 1 302 2689 2990 F 302 96.03 872 reject_low 8 ALIGNMENT 341 YS2-1g06.q1k vc_5 1 639 2556 3179 F 639 86.38 872 reject_vc 0 ALIGNMENT 0 YS2-1g06.q1k vc_4 303 309 1613 1881 F 7 0.00 872 reject_low 12 ALIGNMENT 282 YS2-1g06.p1k vc_7 1 422 13918 14341 F 422 89.34 530 reject_low 6 ALIGNMENT 0 YS2-1g06.q1k vc_4 62 237 1548 1547 F 176 0.00 872 reject_low 12 ALIGNMENT 0 YS2-1g06.q1k vc_7 53 54 5172 6360 C 0 0.00 872 reject_low 11 ALIGNMENT 46 YS2-1g06.q1k vc_4 302 238 48 112 C 65 90.77 872 reject_low 13 ALIGNMENT 264 YS2-1g06.q1k vc_3 1 302 2689 2990 F 302 96.03 872 reject_low 10 ALIGNMENT 288 YS2-1g06.p1k vc_5 422 1 4246 4669 C 422 89.81 530 reject_vc 0 ALIGNMENT 0 YS2-1g06.q1k vc_4 237 62 113 112 C 176 0.00 872 reject_low 13 ALIGNMENT 282 YS2-1g06.p1k vc_7 1 422 456 879 F 422 89.34 530 reject_low 1 ALIGNMENT 288 YS2-1g06.p1k vc_3 422 1 1326 1749 C 422 89.81 530 reject_low 4 ALIGNMENT 210 YS2-1g06.q1k vc_7 302 53 4923 5172 C 250 94.80 872|0,1 reject_low 11 ALIGNMENT 73 YS2-1g06.q1k vc_4 310 639 1882 2195 F 330 77.88 872 reject_low 12 ALIGNMENT 288 YS2-1g06.p1k vc_2 422 1 1326 1749 C 422 89.81 530 reject_low 3 ALIGNMENT 319 YS2-1g06.q1k vc_7 431 1 2142 2569 C 431 92.11 872 reject_low 1 ALIGNMENT 0 YS2-1g06.q1k vc_7 304 303 4700 4922 C 2 0.00 872 reject_low 11 ALIGNMENT 0 YS2-1g06.q1k vc_4 237 62 6340 6339 C 176 0.00 872 reject_low 14 ALIGNMENT 48 YS2-1g06.q1k vc_7 423 305 4584 4699 C 119 83.19 872 reject_low 11 ALIGNMENT 307 YS2-1g06.q1k vc_4 423 1 5233 5654 C 423 91.73 872 reject_low 7 ALIGNMENT 51 YS2-1g06.q1k vc_7 54 3 6360 6411 C 52 100.00 872|1,0 reject_low 11 ALIGNMENT 288 YS2-1g06.p1k vc_6 1 422 3712 4135 F 422 89.81 530 reject_low 5 ALIGNMENT 46 YS2-1g06.q1k vc_4 302 238 6275 6339 C 65 90.77 872 reject_low 14 ALIGNMENT 46 YS2-1g06.q1k vc_4 238 302 1548 1612 F 65 90.77 872 reject_low 12 ALIGNMENT 258 YS2-1g07.q1k vc_3 1 303 2689 2990 F 303 95.71 899 reject_vc 6 ALIGNMENT 310 YS2-1g07.q1k vc_5 1 609 2556 3158 F 609 85.55 899 reject_vc 1 ALIGNMENT 0 YS2-1g07.p1k chr02 261 279 99480 99479 F 19 0.00 279 accept 0 ALIGNMENT 218 YS2-1g07.p1k chr02 36 260 99256 99480 F 225 99.56 279 accept 0 ALIGNMENT 0 YS2-1g07.q1k vc_7 53 54 5172 6360 C 0 0.00 899 reject_vc 7 ALIGNMENT 310 YS2-1g07.q1k vc_7 609 1 1967 2569 C 609 85.39 899 reject_vc 2 ALIGNMENT 56 YS2-1g07.q1k vc_4 318 609 1887 2174 F 292 76.37 899 reject_vc 8 ALIGNMENT 258 YS2-1g07.q1k vc_1 1 303 2689 2990 F 303 95.71 899 reject_vc 4 ALIGNMENT 48 YS2-1g07.q1k vc_7 54 3 6360 6411 C 52 98.08 899|1,0 reject_vc 7 ALIGNMENT 206 YS2-1g07.q1k vc_7 303 53 4923 5172 C 251 94.82 899|0,1 reject_vc 7 ALIGNMENT 281 YS2-1g07.q1k vc_4 409 1 5249 5654 C 409 90.95 899 reject_vc 3 ALIGNMENT 258 YS2-1g07.q1k vc_2 1 303 2322 2623 F 303 95.71 899 reject_vc 5 ALIGNMENT 946 YS2-1g08.p1k chr12 1111 29 182235 183329 C 1083 96.68 1272 accept 0 ALIGNMENT 836 YS2-1g08.q1k chr12 32 1078 177509 178543 F 1047 94.36 1384 accept 0 ALIGNMENT 966 YS2-1g09.p1k chr03 27 1123 192430 193537 F 1097 97.08 1268 accept 0 ALIGNMENT 861 YS2-1g09.q1k chr03 1057 25 192917 193950 C 1033 95.84 1387 accept 0 ALIGNMENT 837 YS2-1g10.q1k chr14 1088 31 679603 680669 C 1058 94.52 1360 accept 0 ALIGNMENT 952 YS2-1g10.p1k chr14 34 1215 676022 677216 F 1182 94.84 1319 accept 0 ALIGNMENT 864 YS2-1g11.p1k chr05 974 31 194291 195245 C 944 97.88 1256 accept 0 ALIGNMENT 841 YS2-1g11.q1k chr05 7 1002 189167 190167 F 996 95.88 1335 accept 0 ALIGNMENT 830 YS2-1g13.q1k chr14 30 1112 761923 762994 F 1083 93.72 1364 accept 0 ALIGNMENT 996 YS2-1g13.p1k chr14 1196 26 764772 765949 C 1171 96.07 1313 accept 0 ALIGNMENT 488 YS2-1g14.q1k vc_7 644 1 1931 2569 C 644 92.70 907 reject_vc 1 ALIGNMENT 0 YS2-1g14.p1k chr13 159 247 609859 609858 F 89 0.00 247 manual 23 ALIGNMENT 26 YS2-1g14.p1k chr13 177 206 609170 609199 F 30 96.67 247|0,11 manual 22 ALIGNMENT 401 YS2-1g14.q1k vc_4 421 1 5232 5654 C 421 98.57 907 reject_vc 2 ALIGNMENT 204 YS2-1g14.p1k chr13 29 246 609075 609293 F 218 98.62 247 manual 8 ALIGNMENT 38 YS2-1g14.p1k chr13 184 246 609357 609419 F 63 87.30 247|12,0 manual 22 ALIGNMENT 28 YS2-1g14.p1k chr13 184 233 608952 609001 F 50 86.00 247 manual 19 ALIGNMENT 47 YS2-1g14.p1k chr13 29 206 609330 609508 F 178 78.65 247 manual 16 ALIGNMENT 65 YS2-1g14.q1k vc_4 304 238 46 112 C 67 100.00 907 reject_low 9 ALIGNMENT 0 YS2-1g14.p1k chr13 62 176 609170 609169 F 115 0.00 247 manual 22 ALIGNMENT 247 YS2-1g14.q1k vc_7 303 53 4922 5172 C 251 99.60 907|0,1 reject_low 7 ALIGNMENT 0 YS2-1g14.p1k chr13 123 122 609479 609823 F 0 0.00 247 manual 23 ALIGNMENT 95 YS2-1g14.p1k chr13 63 246 609491 609686 F 184 85.87 247|11,0 manual 21 ALIGNMENT 65 YS2-1g14.q1k vc_4 238 304 1548 1614 F 67 100.00 907 reject_vc 6 ALIGNMENT 0 YS2-1g14.p1k chr13 196 195 609189 609368 F 0 0.00 247 manual 22 ALIGNMENT 22 YS2-1g14.p1k chr13 111 132 609467 609488 F 22 100.00 247|0,4 manual 23,24 ALIGNMENT 24 YS2-1g14.p1k chr13 187 245 608907 608965 F 59 81.36 247 manual 20 ALIGNMENT 0 YS2-1g14.p1k chr13 74 73 609478 609501 F 0 0.00 247 manual 21 ALIGNMENT 0 YS2-1g14.q1k vc_4 237 62 113 112 C 176 0.00 907 reject_low 9 ALIGNMENT 302 YS2-1g14.q1k vc_1 1 303 2689 2991 F 303 100.00 907 reject_vc 3 ALIGNMENT 0 YS2-1g14.p1k chr13 129 128 609485 609622 F 0 0.00 247 manual 24 ALIGNMENT 0 YS2-1g14.p1k chr13 207 247 609508 609507 F 41 0.00 247 manual 16 ALIGNMENT 51 YS2-1g14.q1k vc_7 54 3 6360 6411 C 52 100.00 907|1,0 reject_low 7 ALIGNMENT 0 YS2-1g14.q1k vc_4 62 237 1548 1547 F 176 0.00 907 reject_vc 6 ALIGNMENT 0 YS2-1g14.p1k chr13 109 110 609489 609466 F 2 0.00 247 manual 23,24 ALIGNMENT 0 YS2-1g14.q1k vc_7 304 304 4700 4921 C 1 0.00 907 reject_low 7 ALIGNMENT 74 YS2-1g14.p1k chr13 29 212 608925 609106 F 184 81.52 247 manual 12 ALIGNMENT 0 YS2-1g14.p1k chr13 213 247 609463 609462 F 35 0.00 247 manual 14 ALIGNMENT 0 YS2-1g14.p1k chr13 62 186 608907 608906 F 125 0.00 247 manual 20 ALIGNMENT 81 YS2-1g14.p1k chr13 29 188 609378 609544 F 160 85.62 247 manual 11 ALIGNMENT 65 YS2-1g14.q1k vc_4 304 238 6273 6339 C 67 100.00 907 reject_low 10 ALIGNMENT 103 YS2-1g14.q1k vc_7 421 305 4583 4699 C 117 96.58 907 reject_low 7 ALIGNMENT 0 YS2-1g14.p1k chr13 213 247 609106 609105 F 35 0.00 247 manual 12 ALIGNMENT 0 YS2-1g14.p1k chr13 62 135 609261 609260 F 74 0.00 247 manual 15 ALIGNMENT 302 YS2-1g14.q1k vc_2 1 303 2322 2624 F 303 100.00 907 reject_vc 4 ALIGNMENT 0 YS2-1g14.p1k chr13 62 84 608907 608906 F 23 0.00 247 manual 17 ALIGNMENT 507 YS2-1g14.q1k vc_5 1 734 2556 3282 F 734 90.74 907 reject_vc 0 ALIGNMENT 0 YS2-1g14.q1k vc_4 237 62 6340 6339 C 176 0.00 907 reject_low 10 ALIGNMENT 0 YS2-1g14.q1k vc_4 305 310 1615 1881 F 6 0.00 907 reject_vc 6 ALIGNMENT 44 YS2-1g14.p1k chr13 85 246 608907 609062 F 162 78.40 247 manual 17 ALIGNMENT 0 YS2-1g14.p1k chr13 153 247 609646 609645 F 95 0.00 247 manual 24 ALIGNMENT 0 YS2-1g14.p1k chr13 207 247 609853 609852 F 41 0.00 247 manual 18 ALIGNMENT 0 YS2-1g14.p1k chr13 62 86 609467 609466 F 25 0.00 247 manual 23,24 ALIGNMENT 46 YS2-1g14.p1k chr13 112 158 609813 609859 F 47 100.00 247|11,0 manual 23 ALIGNMENT 0 YS2-1g14.p1k chr13 62 183 608952 608951 F 122 0.00 247 manual 19 ALIGNMENT 23 YS2-1g14.p1k chr13 124 152 609618 609646 F 29 93.10 247|5,0 manual 24 ALIGNMENT 57 YS2-1g14.p1k chr13 136 245 609261 609370 F 110 84.55 247 manual 15 ALIGNMENT 46 YS2-1g14.p1k chr13 29 84 609432 609488 F 56 94.64 247|0,11 manual 21 ALIGNMENT 0 YS2-1g14.q1k vc_7 53 54 5172 6360 C 0 0.00 907 reject_low 7 ALIGNMENT 22 YS2-1g14.p1k chr13 87 108 609467 609488 F 22 100.00 247 manual 23,24 ALIGNMENT 33 YS2-1g14.p1k chr13 66 206 609710 609853 F 141 77.30 247 manual 18 ALIGNMENT 63 YS2-1g14.p1k chr13 29 111 609777 609860 F 83 92.77 247 manual 13 ALIGNMENT 302 YS2-1g14.q1k vc_3 1 303 2689 2991 F 303 100.00 907 reject_vc 5 ALIGNMENT 0 YS2-1g14.p1k chr13 189 247 609544 609543 F 59 0.00 247 manual 11 ALIGNMENT 195 YS2-1g14.q1k vc_4 311 734 1882 2298 F 424 83.96 907 reject_vc 6 ALIGNMENT 66 YS2-1g14.p1k chr13 66 212 609317 609463 F 147 82.31 247 manual 14 ALIGNMENT 0 YS2-1g14.p1k chr13 112 247 609860 609859 F 136 0.00 247 manual 13 ALIGNMENT 0 YS2-1g16.p1k chr04 115 62 1291014 1291013 C 54 0.00 1357 reject_low 3 ALIGNMENT 22 YS2-1g16.p1k chr12 123 172 701198 701247 F 50 94.00 1357 reject_low 1 ALIGNMENT 843 YS2-1g16.p1k chr06 32 1064 73267 74310 F 1033 94.97 1357 accept 0 ALIGNMENT 0 YS2-1g16.p1k chr09 116 62 105389 105388 C 55 0.00 1357 reject_low 4 ALIGNMENT 0 YS2-1g16.p1k chr04 824 164 1290967 1290966 C 661 0.00 1357 reject_low 3 ALIGNMENT 853 YS2-1g16.q1k chr06 1212 27 76103 77275 C 1186 92.07 1378 accept 0 ALIGNMENT 20 YS2-1g16.p1k chr04 163 116 1290966 1291013 C 48 93.75 1357 reject_low 3 ALIGNMENT 0 YS2-1g16.p1k chr12 173 824 701247 701246 F 652 0.00 1357 reject_low 1 ALIGNMENT 20 YS2-1g16.p1k chr09 158 117 105347 105388 C 42 97.62 1357 reject_low 4 ALIGNMENT 21 YS2-1g16.p1k chr04 117 172 390465 390520 F 56 91.07 1357 reject_low 2 ALIGNMENT 0 YS2-1g16.p1k chr12 62 122 701198 701197 F 61 0.00 1357 reject_low 1 ALIGNMENT 0 YS2-1g16.p1k chr04 173 824 390520 390519 F 652 0.00 1357 reject_low 2 ALIGNMENT 0 YS2-1g16.p1k chr09 824 159 105348 105347 C 666 0.00 1357 reject_low 4 ALIGNMENT 0 YS2-1g16.p1k chr04 62 116 390465 390464 F 55 0.00 1357 reject_low 2 ALIGNMENT 820 YS2-1g18.q1k chr07 1049 34 22989 23994 C 1016 94.69 1401 accept 0 ALIGNMENT 1004 YS2-1g18.p1k chr07 30 1221 22432 23642 F 1192 95.13 1290 accept 0 ALIGNMENT 0 YS2-1g18.q1k chr06 101 701 255043 255042 F 601 0.00 1401 reject_low 1 ALIGNMENT 49 YS2-1g18.q1k chr06 35 100 254978 255043 F 66 92.42 1401 reject_low 1 ALIGNMENT 0 YS2-1g19.q1k chr09 487 748 9520 9519 F 262 0.00 1347 reject_low 15 ALIGNMENT 0 YS2-1g19.q1k chr01 187 748 2233 2232 F 562 0.00 1347 reject_low 2 ALIGNMENT 0 YS2-1g19.q1k chr06 133 748 99603 99602 F 616 0.00 1347 reject_low 12 ALIGNMENT 25 YS2-1g19.q1k chr07 279 500 6810 7030 F 222 72.97 1347 reject_low 16 ALIGNMENT 85 YS2-1g19.q1k chr08 34 142 12195 12303 F 109 93.58 1347 reject_low 19 ALIGNMENT 0 YS2-1g19.q1k chr11 501 748 2560 2559 F 248 0.00 1347 reject_low 1 ALIGNMENT 0 YS2-1g19.q1k chr15 406 234 1082549 1082721 C 173 0.00 1347 reject_low 13 ALIGNMENT 116 YS2-1g19.q1k chr01 34 186 2081 2233 F 153 92.81 1347 reject_low 2 ALIGNMENT 79 YS2-1g19.q1k chr13 233 76 922527 922685 C 158 84.81 1347 reject_low 17 ALIGNMENT 0 YS2-1g19.q1k chr05 748 167 63688 63687 C 582 0.00 1347 reject_low 11 ALIGNMENT 0 YS2-1g19.q1k chr03 748 160 307761 307760 C 589 0.00 1347 reject_low 20 ALIGNMENT 764 YS2-1g19.q1k chr04 1117 34 1522237 1523320 C 1084 90.96 1347 accept 0 ALIGNMENT 83 YS2-1g19.q1k chr11 75 500 2135 2560 F 426 75.12 1347 reject_low 1 ALIGNMENT 73 YS2-1g19.q1k chr03 159 76 307760 307843 C 84 96.43 1347 reject_low 20 ALIGNMENT 0 YS2-1g19.q1k chr12 160 748 13482 13481 F 589 0.00 1347 reject_low 7 ALIGNMENT 35 YS2-1g19.q1k chr16 407 500 8593 8686 F 94 80.85 1347 reject_low 14 ALIGNMENT 49 YS2-1g19.q1k chr06 75 132 99546 99603 F 58 94.83 1347 reject_low 12 ALIGNMENT 0 YS2-1g19.q1k chr14 748 487 781553 781552 C 262 0.00 1347 reject_low 18 ALIGNMENT 102 YS2-1g19.q1k chr07 159 34 1080275 1080400 C 126 94.44 1347 reject_low 9 ALIGNMENT 0 YS2-1g19.q1k chr03 75 60 307844 307868 C 16 0.00 1347 reject_low 20 ALIGNMENT 34 YS2-1g19.q1k chr09 373 486 9407 9520 F 114 79.82 1347 reject_low 15 ALIGNMENT 0 YS2-1g19.q1k chr07 748 160 1080276 1080275 C 589 0.00 1347 reject_low 9 ALIGNMENT 0 YS2-1g19.q1k chr15 172 748 11959 11958 F 577 0.00 1347 reject_low 6 ALIGNMENT 31 YS2-1g19.q1k chr13 495 407 922267 922355 C 89 79.78 1347 reject_low 17 ALIGNMENT 0 YS2-1g19.q1k chr07 501 748 7030 7029 F 248 0.00 1347 reject_low 16 ALIGNMENT 22 YS2-1g19.q1k chr08 441 485 12613 12656 F 45 84.44 1347 reject_low 19 ALIGNMENT 113 YS2-1g19.q1k chr12 186 34 1062852 1063004 C 153 92.16 1347 reject_low 4 ALIGNMENT 78 YS2-1g19.q1k chr09 237 75 433809 433972 C 163 83.44 1347 reject_low 5 ALIGNMENT 113 YS2-1g19.q1k chr10 34 186 9050 9202 F 153 92.16 1347 reject_low 3 ALIGNMENT 88 YS2-1g19.q1k chr15 233 76 1082722 1082880 C 158 86.71 1347 reject_low 13 ALIGNMENT 20 YS2-1g19.q1k chr03 59 31 307869 307897 C 29 89.66 1347 reject_low 20 ALIGNMENT 0 YS2-1g19.q1k chr13 748 496 922268 922267 C 253 0.00 1347 reject_low 17 ALIGNMENT 0 YS2-1g19.q1k chr02 748 160 809015 809014 C 589 0.00 1347 reject_low 8 ALIGNMENT 0 YS2-1g19.q1k chr09 187 372 9220 9406 F 186 0.00 1347 reject_low 15 ALIGNMENT 0 YS2-1g19.q1k chr12 748 187 1062853 1062852 C 562 0.00 1347 reject_low 4 ALIGNMENT 0 YS2-1g19.q1k chr16 234 406 8420 8592 F 173 0.00 1347 reject_low 14 ALIGNMENT 105 YS2-1g19.q1k chr14 159 34 781881 782006 C 126 95.24 1347 reject_low 18 ALIGNMENT 105 YS2-1g19.q1k chr12 34 159 13357 13482 F 126 95.24 1347 reject_low 7 ALIGNMENT 113 YS2-1g19.q1k chr09 34 186 9067 9219 F 153 92.16 1347 reject_low 15 ALIGNMENT 35 YS2-1g19.q1k chr15 500 407 1082455 1082548 C 94 80.85 1347 reject_low 13 ALIGNMENT 0 YS2-1g19.q1k chr08 143 440 12304 12612 F 298 0.00 1347 reject_low 19 ALIGNMENT 105 YS2-1g19.q1k chr07 34 171 6564 6701 F 138 92.75 1347 reject_low 16 ALIGNMENT 0 YS2-1g19.q1k chr10 187 748 9202 9201 F 562 0.00 1347 reject_low 3 ALIGNMENT 98 YS2-1g19.q1k chr02 34 159 7879 8005 F 126 93.65 1347 reject_low 10 ALIGNMENT 94 YS2-1g19.q1k chr05 166 34 63687 63816 C 133 92.48 1347 reject_low 11 ALIGNMENT 0 YS2-1g19.q1k chr08 486 748 12656 12655 F 263 0.00 1347 reject_low 19 ALIGNMENT 88 YS2-1g19.q1k chr16 76 233 8261 8419 F 158 86.71 1347 reject_low 14 ALIGNMENT 0 YS2-1g19.q1k chr13 406 234 922356 922526 C 173 0.00 1347 reject_low 17 ALIGNMENT 0 YS2-1g19.q1k chr15 748 501 1082456 1082455 C 248 0.00 1347 reject_low 13 ALIGNMENT 0 YS2-1g19.q1k chr02 160 748 8005 8004 F 589 0.00 1347 reject_low 10 ALIGNMENT 0 YS2-1g19.q1k chr16 501 748 8686 8685 F 248 0.00 1347 reject_low 14 ALIGNMENT 0 YS2-1g19.q1k chr09 748 238 433810 433809 C 511 0.00 1347 reject_low 5 ALIGNMENT 0 YS2-1g19.q1k chr07 172 278 6702 6809 F 107 0.00 1347 reject_low 16 ALIGNMENT 102 YS2-1g19.q1k chr02 159 34 809014 809139 C 126 94.44 1347 reject_low 8 ALIGNMENT 0 YS2-1g19.q1k chr14 372 160 781666 781880 C 213 0.00 1347 reject_low 18 ALIGNMENT 102 YS2-1g19.q1k chr15 34 171 11822 11959 F 138 92.03 1347 reject_low 6 ALIGNMENT 31 YS2-1g19.q1k chr14 486 373 781552 781665 C 114 78.07 1347 reject_low 18 ALIGNMENT 892 YS2-1g20.p1k chr05 1078 36 42068 43122 C 1043 95.40 1236 accept 0 ALIGNMENT 801 YS2-1g20.q1k chr05 25 982 41826 42773 F 958 95.62 1383 accept 0 ALIGNMENT 1027 YS2-1g21.p1k chr06 1171 29 51348 52489 C 1143 97.46 1221 accept 0 ALIGNMENT 789 YS2-1g21.q1k chr06 2 913 46383 47293 F 912 96.49 1241 accept 0 ALIGNMENT 651 YS2-1h02.p1k chr04 33 723 830080 830770 F 691 99.57 724 accept_chi 0 ALIGNMENT 502 YS2-1h02.q1k chr04 636 12 830080 830698 C 625 95.84 1306 accept_chi 1 ALIGNMENT 851 YS2-1h03.q1k chr15 1110 32 264021 265092 C 1079 94.53 1363 accept 0 ALIGNMENT 894 YS2-1h03.p1k chr15 35 1131 260780 261898 F 1097 95.53 1252 accept 0 ALIGNMENT 970 YS2-1h04.p1k chr15 34 1210 260780 261968 F 1177 95.58 1278 accept 0 ALIGNMENT 770 YS2-1h04.q1k chr15 1046 6 264045 265084 C 1041 92.89 1317 accept 0 ALIGNMENT 41 YS2-1h05.q1k vc_7 417 313 4583 4691 C 105 81.90 802 reject_vc 7 ALIGNMENT 45 YS2-1h05.q1k vc_4 238 304 1548 1614 F 67 89.55 802 reject_vc 10 ALIGNMENT 0 YS2-1h05.q1k vc_4 305 312 1615 1883 F 8 0.00 802 reject_vc 10 ALIGNMENT 204 YS2-1h05.q1k vc_7 303 53 4922 5172 C 251 94.02 802|0,1 reject_vc 7 ALIGNMENT 0 YS2-1h05.q1k vc_4 237 62 113 112 C 176 0.00 802 reject_vc 8 ALIGNMENT 255 YS2-1h05.q1k vc_2 1 303 2322 2624 F 303 95.05 802 reject_vc 5 ALIGNMENT 290 YS2-1h05.q1k vc_4 417 1 5232 5654 C 417 90.65 802 reject_vc 3 ALIGNMENT 58 YS2-1h05.q1k vc_4 313 478 1884 2059 F 166 80.72 802 reject_vc 10 ALIGNMENT 45 YS2-1h05.q1k vc_4 304 238 6273 6339 C 67 89.55 802 reject_vc 9 ALIGNMENT 255 YS2-1h05.q1k vc_1 1 303 2689 2991 F 303 95.05 802 reject_vc 4 ALIGNMENT 284 YS2-1h05.p1k chr11 40 330 236538 236828 F 291 99.66 349 accept 0 ALIGNMENT 0 YS2-1h05.p1k chr11 331 349 236828 236827 F 19 0.00 349 accept 0 ALIGNMENT 314 YS2-1h05.q1k vc_5 1 478 2556 3043 F 478 89.54 802 reject_vc 1 ALIGNMENT 48 YS2-1h05.q1k vc_7 54 3 6360 6411 C 52 98.08 802|1,0 reject_vc 7 ALIGNMENT 0 YS2-1h05.q1k vc_7 53 54 5172 6360 C 0 0.00 802 reject_vc 7 ALIGNMENT 0 YS2-1h05.q1k vc_4 237 62 6340 6339 C 176 0.00 802 reject_vc 9 ALIGNMENT 314 YS2-1h05.q1k vc_7 478 1 2082 2569 C 478 89.54 802 reject_vc 2 ALIGNMENT 255 YS2-1h05.q1k vc_3 1 303 2689 2991 F 303 95.05 802 reject_vc 6 ALIGNMENT 0 YS2-1h05.q1k vc_7 312 304 4692 4921 C 9 0.00 802 reject_vc 7 ALIGNMENT 45 YS2-1h05.q1k vc_4 304 238 46 112 C 67 89.55 802 reject_vc 8 ALIGNMENT 0 YS2-1h05.q1k vc_4 62 237 1548 1547 F 176 0.00 802 reject_vc 10 ALIGNMENT 0 YS2-1h06.q1k vc_4 636 635 5872 6353 F 0 0.00 1319 reject_low 9 ALIGNMENT 0 YS2-1h06.q1k vc_3 62 634 2531 2530 F 573 0.00 1319 reject_low 7 ALIGNMENT 38 YS2-1h06.q1k vc_7 598 635 63 100 F 38 100.00 1319 reject_low 16 ALIGNMENT 0 YS2-1h06.q1k vc_7 794 62 6412 6411 C 733 0.00 1319 reject_low 11 ALIGNMENT 0 YS2-1h06.q1k vc_7 62 597 13525 13524 F 536 0.00 1319 reject_low 17 ALIGNMENT 0 YS2-1h06.q1k vc_5 596 62 5064 5063 C 535 0.00 1319 reject_low 15 ALIGNMENT 0 YS2-1h06.q1k vc_7 62 597 63 62 F 536 0.00 1319 reject_low 16 ALIGNMENT 157 YS2-1h06.q1k vc_4 635 796 6353 6514 F 162 99.38 1319|1,0 reject_low 9 ALIGNMENT 0 YS2-1h06.q1k vc_1 718 636 2473 2472 C 83 0.00 1319 reject_low 12 ALIGNMENT 41 YS2-1h06.q1k vc_1 635 595 2472 2512 C 41 100.00 1319 reject_low 12 ALIGNMENT 39 YS2-1h06.q1k vc_5 635 597 5025 5063 C 39 100.00 1319 reject_low 15 ALIGNMENT 0 YS2-1h06.q1k vc_2 62 634 2164 2163 F 573 0.00 1319 reject_low 6 ALIGNMENT 303 YS2-1h06.q1k vc_2 635 1086 2164 2623 F 452 90.04 1319 reject_low 6 ALIGNMENT 306 YS2-1h06.q1k vc_5 635 1148 2398 2919 F 514 87.55 1319 reject_low 2 ALIGNMENT 41 YS2-1h06.q1k vc_7 845 795 6360 6411 C 51 94.12 1319|1,0 reject_low 11 ALIGNMENT 0 YS2-1h06.q1k vc_5 596 62 37 36 C 535 0.00 1319 reject_low 18 ALIGNMENT 0 YS2-1h06.q1k vc_4 62 634 126 125 F 573 0.00 1319 reject_low 8 ALIGNMENT 0 YS2-1h06.q1k vc_5 718 636 5026 5025 C 83 0.00 1319 reject_low 15 ALIGNMENT 0 YS2-1h06.q1k vc_2 718 636 2106 2105 C 83 0.00 1319 reject_low 13 ALIGNMENT 0 YS2-1h06.q1k vc_3 594 62 2513 2512 C 533 0.00 1319 reject_low 14 ALIGNMENT 0 YS2-1h06.q1k vc_4 62 594 5831 5830 F 533 0.00 1319 reject_low 9 ALIGNMENT 38 YS2-1h06.q1k vc_7 598 635 13525 13562 F 38 100.00 1319 reject_low 17 ALIGNMENT 0 YS2-1h06.q1k vc_4 634 62 1535 1534 C 573 0.00 1319 reject_low 10 ALIGNMENT 157 YS2-1h06.q1k vc_4 635 796 126 287 F 162 99.38 1319 reject_low 8 ALIGNMENT 560 YS2-1h06.p1k chr07 32 600 154695 155263 F 569 100.00 618 accept_chi 0 ALIGNMENT 0 YS2-1h06.q1k chr07 718 595 154696 154695 C 124 0.00 1319 accept_chi 1 ALIGNMENT 85 YS2-1h06.q1k vc_4 723 635 1446 1534 C 89 98.88 1319 reject_low 10 ALIGNMENT 0 YS2-1h06.q1k vc_7 636 718 13562 13561 F 83 0.00 1319 reject_low 17 ALIGNMENT 106 YS2-1h06.q1k vc_7 1086 844 4923 5172 C 243 82.72 1319|0,1 reject_low 11 ALIGNMENT 303 YS2-1h06.q1k vc_3 635 1086 2531 2990 F 452 90.04 1319 reject_low 7 ALIGNMENT 0 YS2-1h06.p1k chr07 601 618 155263 155262 F 18 0.00 618 accept_chi 0 ALIGNMENT 41 YS2-1h06.q1k vc_2 635 595 2105 2145 C 41 100.00 1319 reject_low 13 ALIGNMENT 306 YS2-1h06.q1k vc_7 1148 635 2206 2727 C 514 87.94 1319 reject_low 3 ALIGNMENT 0 YS2-1h06.q1k vc_3 718 636 2473 2472 C 83 0.00 1319 reject_low 14 ALIGNMENT 0 YS2-1h06.q1k vc_5 62 634 2398 2397 F 573 0.00 1319 reject_low 2 ALIGNMENT 303 YS2-1h06.q1k vc_1 635 1086 2531 2990 F 452 90.04 1319 reject_low 5 ALIGNMENT 0 YS2-1h06.q1k vc_1 594 62 2513 2512 C 533 0.00 1319 reject_low 12 ALIGNMENT 0 YS2-1h06.q1k vc_5 718 633 2 1 C 86 0.00 1319 reject_low 18 ALIGNMENT 0 YS2-1h06.q1k vc_2 594 62 2146 2145 C 533 0.00 1319 reject_low 13 ALIGNMENT 41 YS2-1h06.q1k vc_4 595 635 5831 5871 F 41 100.00 1319 reject_low 9 ALIGNMENT 41 YS2-1h06.q1k vc_3 635 595 2472 2512 C 41 100.00 1319 reject_low 14 ALIGNMENT 0 YS2-1h06.q1k vc_1 62 634 2531 2530 F 573 0.00 1319 reject_low 5 ALIGNMENT 299 YS2-1h06.q1k vc_4 1148 635 5289 5812 C 514 87.55 1319 reject_low 4 ALIGNMENT 0 YS2-1h06.q1k vc_7 634 62 2728 2727 C 573 0.00 1319 reject_low 3 ALIGNMENT 560 YS2-1h06.q1k chr07 594 26 154695 155263 C 569 100.00 1319 accept_chi 1 ALIGNMENT 36 YS2-1h06.q1k vc_5 632 597 1 36 C 36 100.00 1319 reject_low 18 ALIGNMENT 0 YS2-1h06.q1k vc_7 636 718 100 99 F 83 0.00 1319 reject_low 16 ALIGNMENT 0 YS2-1h06.q1k vc_4 634 62 5813 5812 C 573 0.00 1319 reject_low 4 ALIGNMENT 0 YS2-1h06.q1k vc_7 844 845 5172 6360 C 0 0.00 1319 reject_low 11 ALIGNMENT 0 YS2-1h07.p1k vc_6 62 926 3585 3584 F 865 0.00 1313 reject_low 9 ALIGNMENT 72 YS2-1h07.q1k vc_4 718 860 126 277 F 143 86.71 1385 reject_low 13 ALIGNMENT 41 YS2-1h07.q1k vc_1 718 678 2472 2512 C 41 100.00 1385 reject_low 15 ALIGNMENT 0 YS2-1h07.q1k vc_5 62 717 2398 2397 F 656 0.00 1385 reject_low 2 ALIGNMENT 0 YS2-1h07.p1k vc_3 878 730 2442 2441 C 149 0.00 1313 reject_low 21 ALIGNMENT 0 YS2-1h07.p1k vc_2 698 62 2106 2105 C 637 0.00 1313 reject_low 5 ALIGNMENT 26 YS2-1h07.p1k vc_3 729 699 2441 2472 C 31 96.77 1313 reject_low 21 ALIGNMENT 0 YS2-1h07.q1k vc_1 62 717 2531 2530 F 656 0.00 1385 reject_low 10 ALIGNMENT 345 YS2-1h07.p1k vc_2 1276 699 1514 2105 C 578 88.93 1313 reject_low 5 ALIGNMENT 0 YS2-1h07.q1k vc_5 679 62 37 36 C 618 0.00 1385 reject_low 19 ALIGNMENT 41 YS2-1h07.q1k vc_3 718 678 2472 2512 C 41 100.00 1385 reject_low 16 ALIGNMENT 0 YS2-1h07.q1k vc_1 677 62 2513 2512 C 616 0.00 1385 reject_low 15 ALIGNMENT 345 YS2-1h07.p1k vc_7 699 1276 100 691 F 578 88.93 1313 reject_low 3 ALIGNMENT 0 YS2-1h07.q1k vc_4 719 718 5872 6353 F 0 0.00 1385 reject_low 22 ALIGNMENT 59 YS2-1h07.q1k vc_4 796 718 1452 1534 C 79 93.67 1385 reject_low 14 ALIGNMENT 75 YS2-1h07.q1k vc_4 887 718 5632 5812 C 170 84.71 1385 reject_low 12 ALIGNMENT 0 YS2-1h07.q1k chr03 679 714 136992 136991 F 36 0.00 1385 accept_chi 1 ALIGNMENT 0 YS2-1h07.p1k vc_3 698 62 2106 2105 C 637 0.00 1313 reject_low 6 ALIGNMENT 38 YS2-1h07.q1k vc_7 681 718 13525 13562 F 38 100.00 1385 reject_low 18 ALIGNMENT 0 YS2-1h07.p1k vc_7 62 698 13562 13561 F 637 0.00 1313 reject_low 7 ALIGNMENT 0 YS2-1h07.p1k vc_1 698 62 2106 2105 C 637 0.00 1313 reject_low 4 ALIGNMENT 281 YS2-1h07.p1k vc_4 699 1042 5871 6209 F 344 95.06 1313 reject_low 8 ALIGNMENT 82 YS2-1h07.q1k vc_1 718 979 2531 2804 F 262 80.15 1385 reject_low 10 ALIGNMENT 82 YS2-1h07.q1k vc_3 718 979 2531 2804 F 262 80.15 1385 reject_low 11 ALIGNMENT 36 YS2-1h07.q1k vc_5 715 680 1 36 C 36 100.00 1385 reject_low 19 ALIGNMENT 0 YS2-1h07.q1k vc_4 717 62 1535 1534 C 656 0.00 1385 reject_low 14 ALIGNMENT 26 YS2-1h07.p1k vc_1 729 699 2441 2472 C 31 96.77 1313 reject_low 20 ALIGNMENT 0 YS2-1h07.q1k vc_5 679 62 5064 5063 C 618 0.00 1385 reject_low 17 ALIGNMENT 0 YS2-1h07.q1k vc_4 62 677 5831 5830 F 616 0.00 1385 reject_low 22 ALIGNMENT 0 YS2-1h07.q1k vc_3 62 717 2531 2530 F 656 0.00 1385 reject_low 11 ALIGNMENT 146 YS2-1h07.p1k vc_6 927 1276 3585 3947 F 350 84.57 1313 reject_low 9 ALIGNMENT 82 YS2-1h07.q1k vc_5 718 979 2398 2671 F 262 80.15 1385 reject_low 2 ALIGNMENT 80 YS2-1h07.q1k vc_7 930 718 2502 2727 C 213 82.63 1385 reject_low 3 ALIGNMENT 0 YS2-1h07.q1k vc_4 62 717 126 125 F 656 0.00 1385 reject_low 13 ALIGNMENT 633 YS2-1h07.p1k chr03 681 30 136341 136992 C 652 100.00 1313 accept_chi 0 ALIGNMENT 0 YS2-1h07.p1k vc_7 62 698 100 99 F 637 0.00 1313 reject_low 3 ALIGNMENT 0 YS2-1h07.p1k chr03 878 682 136342 136341 C 197 0.00 1313 accept_chi 0 ALIGNMENT 0 YS2-1h07.q1k vc_7 62 680 13525 13524 F 619 0.00 1385 reject_low 18 ALIGNMENT 345 YS2-1h07.p1k vc_1 1276 699 1514 2105 C 578 88.93 1313 reject_low 4 ALIGNMENT 0 YS2-1h07.p1k vc_3 698 62 2473 2472 C 637 0.00 1313 reject_low 21 ALIGNMENT 0 YS2-1h07.q1k vc_7 717 62 2728 2727 C 656 0.00 1385 reject_low 3 ALIGNMENT 0 YS2-1h07.p1k vc_5 698 62 5026 5025 C 637 0.00 1313 reject_low 2 ALIGNMENT 0 YS2-1h07.p1k vc_1 878 730 2442 2441 C 149 0.00 1313 reject_low 20 ALIGNMENT 345 YS2-1h07.p1k vc_3 1276 699 1514 2105 C 578 88.93 1313 reject_low 6 ALIGNMENT 41 YS2-1h07.q1k vc_4 678 718 5831 5871 F 41 100.00 1385 reject_low 22 ALIGNMENT 0 YS2-1h07.p1k vc_4 62 698 5871 5870 F 637 0.00 1313 reject_low 8 ALIGNMENT 39 YS2-1h07.q1k vc_5 718 680 5025 5063 C 39 100.00 1385 reject_low 17 ALIGNMENT 72 YS2-1h07.q1k vc_4 718 860 6353 6504 F 143 86.71 1385|1,0 reject_low 22 ALIGNMENT 345 YS2-1h07.p1k vc_7 699 1276 13562 14153 F 578 88.93 1313 reject_low 7 ALIGNMENT 0 YS2-1h07.q1k vc_3 677 62 2513 2512 C 616 0.00 1385 reject_low 16 ALIGNMENT 345 YS2-1h07.p1k vc_5 1276 699 4434 5025 C 578 88.93 1313 reject_low 2 ALIGNMENT 0 YS2-1h07.q1k vc_4 717 62 5813 5812 C 656 0.00 1385 reject_low 12 ALIGNMENT 0 YS2-1h07.p1k vc_1 698 62 2473 2472 C 637 0.00 1313 reject_low 20 ALIGNMENT 628 YS2-1h07.q1k chr03 28 678 136341 136992 F 651 99.85 1385 accept_chi 1 ALIGNMENT 249 YS2-1h08.p1k chr03 648 72 136366 136945 C 577 81.98 1283 accept 0 ALIGNMENT 0 YS2-1h09.p1k chr07 213 196 717298 717297 C 18 0.00 213 accept 0 ALIGNMENT 155 YS2-1h09.p1k chr07 195 37 717297 717455 C 159 99.37 213 accept 0 ALIGNMENT 875 YS2-1h12.p1k chr04 29 1009 336959 337954 F 981 97.25 1274 accept 0 ALIGNMENT 896 YS2-1h12.q1k chr04 1122 25 341410 342499 C 1098 95.54 1386 accept 0 ALIGNMENT 0 YS2-1h13.p1k chr03 248 230 172639 172638 C 19 0.00 248 accept 0 ALIGNMENT 180 YS2-1h13.p1k chr03 229 31 172638 172835 C 199 98.99 248 accept 0 ALIGNMENT 214 YS2-1h14.q1k vc_1 1 283 2689 2969 F 283 92.93 643 reject_vc 4 ALIGNMENT 214 YS2-1h14.q1k vc_2 1 283 2322 2602 F 283 92.93 643 reject_vc 5 ALIGNMENT 0 YS2-1h14.q1k vc_7 53 54 5172 6360 C 0 0.00 643 reject_vc 7 ALIGNMENT 231 YS2-1h14.q1k vc_7 371 1 2206 2569 C 371 88.95 643 reject_vc 2 ALIGNMENT 224 YS2-1h14.q1k vc_4 371 1 5289 5654 C 371 88.41 643 reject_vc 3 ALIGNMENT 0 YS2-1h14.p1k chr16 512 529 478215 478214 F 18 0.00 529 accept 0 ALIGNMENT 214 YS2-1h14.q1k vc_3 1 283 2689 2969 F 283 92.93 643 reject_vc 6 ALIGNMENT 465 YS2-1h14.p1k chr16 28 511 477731 478215 F 484 99.17 529 accept 0 ALIGNMENT 51 YS2-1h14.q1k vc_7 54 3 6360 6411 C 52 100.00 643|1,0 reject_vc 7 ALIGNMENT 235 YS2-1h14.q1k vc_5 1 485 2556 3031 F 485 85.15 643 reject_vc 1 ALIGNMENT 160 YS2-1h14.q1k vc_7 283 53 4944 5172 C 231 90.91 643|0,1 reject_vc 7 ALIGNMENT 21 YS2-1h14.q1k vc_4 333 485 1898 2047 F 153 75.16 643 reject_vc 8 ALIGNMENT 0 YS2-1h15.p1k chr01 62 138 185245 185244 F 77 0.00 1593 reject_low 5 ALIGNMENT 72 YS2-1h15.p1k chr01 113 286 188440 188613 F 174 81.03 1593 reject_low 4 ALIGNMENT 0 YS2-1h15.q1k chr01 316 62 186552 186551 C 255 0.00 1446 reject_low 6 ALIGNMENT 50 YS2-1h15.q1k chr01 892 822 188162 188232 C 71 91.55 1446 reject_low 2,5 ALIGNMENT 0 YS2-1h15.q1k chr01 716 615 188444 188443 C 102 0.00 1446 reject_low 4 ALIGNMENT 28 YS2-1h15.p1k chr01 139 186 185245 185292 F 48 87.50 1593 reject_low 5 ALIGNMENT 0 YS2-1h15.p1k chr01 434 892 187673 188066 F 459 0.00 1593 reject_low 2 ALIGNMENT 136 YS2-1h15.p1k chr07 97 433 402915 403251 F 337 80.71 1593 reject_low 3 ALIGNMENT 0 YS2-1h15.p1k chr01 62 112 188440 188439 F 51 0.00 1593 reject_low 4 ALIGNMENT 72 YS2-1h15.q1k chr01 614 462 188443 188595 C 153 83.01 1446 reject_low 2,4,5 ALIGNMENT 0 YS2-1h15.p1k chr07 434 798 403251 403250 F 365 0.00 1593 reject_low 3 ALIGNMENT 42 YS2-1h15.q1k chr01 532 453 186343 186422 C 80 85.00 1446|12,0 reject_low 6 ALIGNMENT 586 YS2-1h15.q1k chr01 1088 35 186884 187960 C 1054 86.81 1446 accept 0 ALIGNMENT 0 YS2-1h15.q1k chr01 821 615 188233 188442 C 207 0.00 1446 reject_low 2,5 ALIGNMENT 0 YS2-1h15.p1k chr01 285 798 186429 186428 F 514 0.00 1593 accept 0 ALIGNMENT 0 YS2-1h15.q1k chr01 461 62 188596 188595 C 400 0.00 1446 reject_low 2,4,5 ALIGNMENT 0 YS2-1h15.q1k chr01 833 635 183884 184082 C 199 0.00 1446 reject_low 6 ALIGNMENT 50 YS2-1h15.p1k chr01 157 284 186302 186429 F 128 80.47 1593 accept 0 ALIGNMENT 0 YS2-1h15.p1k chr01 62 156 186302 186301 F 95 0.00 1593 accept 0 ALIGNMENT 0 YS2-1h15.p1k chr01 187 798 185292 185291 F 612 0.00 1593 reject_low 5 ALIGNMENT 0 YS2-1h15.p1k chr07 62 96 402915 402914 F 35 0.00 1593 reject_low 3 ALIGNMENT 0 YS2-1h15.q1k chr01 452 368 186423 186501 C 85 0.00 1446 reject_low 6 ALIGNMENT 20 YS2-1h15.q1k chr01 367 317 186502 186551 C 51 82.35 1446 reject_low 6 ALIGNMENT 0 YS2-1h15.p1k chr01 287 798 188613 188612 F 512 0.00 1593 reject_low 4 ALIGNMENT 45 YS2-1h15.q1k chr01 634 509 184083 184208 C 126 79.37 1446|0,12 reject_low 6 ALIGNMENT 0 YS2-1h15.p1k chr01 62 95 187335 187334 F 34 0.00 1593 reject_low 2 ALIGNMENT 42 YS2-1h15.q1k chr01 951 834 183764 183883 C 118 79.66 1446 reject_low 6 ALIGNMENT 0 YS2-1h15.q1k chr01 520 521 184197 186354 C 0 0.00 1446 reject_low 6 ALIGNMENT 222 YS2-1h15.q1k chr07 951 35 402592 403548 C 917 76.88 1446 reject_low 1 ALIGNMENT 152 YS2-1h15.p1k chr01 96 433 187335 187672 F 338 82.25 1593 reject_low 2 ALIGNMENT 40 YS2-1h15.p1k chr01 893 1053 188067 188224 F 161 75.78 1593 reject_low 2 ALIGNMENT 299 YS2-1h16.q1k vc_1 1 303 2689 2991 F 303 99.67 942 reject_low 3 ALIGNMENT 0 YS2-1h16.q1k vc_4 62 237 1548 1547 F 176 0.00 942 reject_low 6 ALIGNMENT 0 YS2-1h16.q1k vc_7 304 304 4700 4921 C 1 0.00 942 reject_low 7 ALIGNMENT 462 YS2-1h16.q1k vc_5 1 674 2556 3222 F 674 90.65 942 reject_vc 0 ALIGNMENT 0 YS2-1h16.q1k vc_4 237 62 113 112 C 176 0.00 942 reject_low 8 ALIGNMENT 244 YS2-1h16.q1k vc_7 303 53 4922 5172 C 251 99.20 942|0,1 reject_low 7 ALIGNMENT 65 YS2-1h16.q1k vc_4 304 238 6273 6339 C 67 100.00 942 reject_low 9 ALIGNMENT 0 YS2-1h16.q1k vc_4 237 62 6340 6339 C 176 0.00 942 reject_low 9 ALIGNMENT 402 YS2-1h16.q1k vc_4 419 1 5234 5654 C 419 98.81 942 reject_low 2 ALIGNMENT 155 YS2-1h16.q1k vc_4 308 674 1879 2238 F 367 83.11 942 reject_low 6 ALIGNMENT 299 YS2-1h16.q1k vc_3 1 303 2689 2991 F 303 99.67 942 reject_low 5 ALIGNMENT 0 YS2-1h16.q1k vc_4 305 307 1615 1878 F 3 0.00 942 reject_low 6 ALIGNMENT 299 YS2-1h16.q1k vc_2 1 303 2322 2624 F 303 99.67 942 reject_low 4 ALIGNMENT 65 YS2-1h16.q1k vc_4 304 238 46 112 C 67 100.00 942 reject_low 8 ALIGNMENT 107 YS2-1h16.q1k vc_7 419 305 4585 4699 C 115 98.26 942 reject_low 7 ALIGNMENT 51 YS2-1h16.q1k vc_7 54 3 6360 6411 C 52 100.00 942|1,0 reject_low 7 ALIGNMENT 0 YS2-1h16.q1k vc_7 53 54 5172 6360 C 0 0.00 942 reject_low 7 ALIGNMENT 459 YS2-1h16.q1k vc_7 529 1 2042 2569 C 529 96.03 942 reject_low 1 ALIGNMENT 65 YS2-1h16.q1k vc_4 238 304 1548 1614 F 67 100.00 942 reject_low 6 ALIGNMENT 158 YS2-1h17.p1k vc_7 860 1117 100 373 F 258 88.76 1267 reject_low 7 ALIGNMENT 158 YS2-1h17.p1k vc_4 860 1117 5871 6144 F 258 88.76 1267 reject_low 5 ALIGNMENT 0 YS2-1h17.p1k vc_1 62 839 2511 2510 F 778 0.00 1267 reject_low 11 ALIGNMENT 158 YS2-1h17.p1k vc_7 860 1117 13562 13835 F 258 88.76 1267 reject_low 8 ALIGNMENT 0 YS2-1h17.p1k vc_2 859 62 2106 2105 C 798 0.00 1267 reject_low 3 ALIGNMENT 0 YS2-1h17.p1k vc_2 62 839 2144 2143 F 778 0.00 1267 reject_low 12 ALIGNMENT 0 YS2-1h17.p1k chr13 842 862 427664 427663 F 21 0.00 1267 accept_chi 0 ALIGNMENT 0 YS2-1h17.p1k vc_7 62 859 13562 13561 F 798 0.00 1267 reject_low 8 ALIGNMENT 0 YS2-1h17.p1k vc_3 62 839 2511 2510 F 778 0.00 1267 reject_low 13 ALIGNMENT 158 YS2-1h17.p1k vc_1 1117 860 1832 2105 C 258 88.76 1267 reject_low 2 ALIGNMENT 21 YS2-1h17.p1k vc_4 860 840 5812 5832 C 21 100.00 1267 reject_low 14 ALIGNMENT 0 YS2-1h17.p1k vc_7 839 62 2748 2747 C 778 0.00 1267 reject_low 15 ALIGNMENT 0 YS2-1h17.p1k vc_1 859 62 2106 2105 C 798 0.00 1267 reject_low 2 ALIGNMENT 0 YS2-1h17.p1k vc_1 859 62 2473 2472 C 798 0.00 1267 reject_low 9 ALIGNMENT 0 YS2-1h17.p1k vc_5 859 62 5026 5025 C 798 0.00 1267 reject_low 6 ALIGNMENT 21 YS2-1h17.p1k vc_2 840 860 2144 2164 F 21 100.00 1267 reject_low 12 ALIGNMENT 20 YS2-1h17.p1k vc_5 841 860 2379 2398 F 20 100.00 1267 reject_low 16 ALIGNMENT 0 YS2-1h17.p1k vc_3 859 62 2106 2105 C 798 0.00 1267 reject_low 4 ALIGNMENT 158 YS2-1h17.p1k vc_5 1117 860 4752 5025 C 258 88.76 1267 reject_low 6 ALIGNMENT 21 YS2-1h17.p1k vc_1 840 860 2511 2531 F 21 100.00 1267 reject_low 11 ALIGNMENT 26 YS2-1h17.p1k vc_3 890 860 2441 2472 C 31 96.77 1267 reject_low 10 ALIGNMENT 0 YS2-1h17.p1k vc_4 839 62 5833 5832 C 778 0.00 1267 reject_low 14 ALIGNMENT 0 YS2-1h17.p1k vc_7 62 859 100 99 F 798 0.00 1267 reject_low 7 ALIGNMENT 749 YS2-1h17.q1k chr13 844 30 426858 427664 C 815 98.40 1375 accept_chi 1 ALIGNMENT 158 YS2-1h17.p1k vc_2 1117 860 1832 2105 C 258 88.76 1267 reject_low 3 ALIGNMENT 0 YS2-1h17.p1k vc_4 62 859 5871 5870 F 798 0.00 1267 reject_low 5 ALIGNMENT 21 YS2-1h17.p1k vc_3 840 860 2511 2531 F 21 100.00 1267 reject_low 13 ALIGNMENT 26 YS2-1h17.p1k vc_1 890 860 2441 2472 C 31 96.77 1267 reject_low 9 ALIGNMENT 21 YS2-1h17.p1k vc_7 860 840 2727 2747 C 21 100.00 1267 reject_low 15 ALIGNMENT 792 YS2-1h17.p1k chr13 35 841 426858 427664 F 807 99.88 1267 accept_chi 0 ALIGNMENT 0 YS2-1h17.p1k vc_3 859 62 2473 2472 C 798 0.00 1267 reject_low 10 ALIGNMENT 0 YS2-1h17.p1k vc_5 62 840 2379 2378 F 779 0.00 1267 reject_low 16 ALIGNMENT 158 YS2-1h17.p1k vc_3 1117 860 1832 2105 C 258 88.76 1267 reject_low 4 ALIGNMENT 161 YS2-1h18.p1k chr02 238 587 532486 532807 F 350 87.14 987 accept 0 ALIGNMENT 673 YS2-1h18.q1k chr02 892 7 537397 538277 C 886 93.79 1365 accept 0 ALIGNMENT 337 YS2-1h20.p1k vc_2 595 1 1168 1749 C 595 87.23 604 reject_low 3 ALIGNMENT 279 YS2-1h20.q1k vc_7 432 1 2150 2569 C 432 90.28 889 reject_vc 1 ALIGNMENT 30 YS2-1h20.q1k vc_4 303 245 6278 6334 C 59 86.44 889 reject_low 14 ALIGNMENT 245 YS2-1h20.q1k vc_3 1 303 2689 2987 F 303 94.72 889 reject_low 10 ALIGNMENT 0 YS2-1h20.q1k vc_7 53 54 5172 6360 C 0 0.00 889 reject_low 11 ALIGNMENT 193 YS2-1h20.q1k vc_7 303 53 4926 5172 C 251 93.63 889|0,1 reject_low 11 ALIGNMENT 280 YS2-1h20.q1k vc_5 1 432 2556 2975 F 432 90.51 889 reject_vc 0 ALIGNMENT 0 YS2-1h20.q1k vc_4 244 62 6335 6334 C 183 0.00 889 reject_low 14 ALIGNMENT 337 YS2-1h20.p1k vc_1 595 1 1168 1749 C 595 87.23 604 reject_low 2 ALIGNMENT 30 YS2-1h20.q1k vc_4 303 245 51 107 C 59 86.44 889 reject_low 12 ALIGNMENT 337 YS2-1h20.p1k vc_3 595 1 1168 1749 C 595 87.23 604 reject_low 4 ALIGNMENT 330 YS2-1h20.p1k vc_7 1 595 456 1037 F 595 86.89 604 reject_vc 1 ALIGNMENT 0 YS2-1h20.q1k vc_4 244 62 108 107 C 183 0.00 889 reject_low 12 ALIGNMENT 245 YS2-1h20.q1k vc_1 1 303 2689 2987 F 303 94.72 889 reject_low 8 ALIGNMENT 0 YS2-1h20.q1k vc_4 62 244 1553 1552 F 183 0.00 889 reject_low 13 ALIGNMENT 245 YS2-1h20.q1k vc_2 1 303 2322 2620 F 303 94.72 889 reject_low 9 ALIGNMENT 30 YS2-1h20.q1k vc_4 245 303 1553 1609 F 59 86.44 889 reject_low 13 ALIGNMENT 47 YS2-1h20.q1k vc_7 54 3 6360 6411 C 52 98.08 889|1,0 reject_low 11 ALIGNMENT 340 YS2-1h20.p1k vc_5 595 1 4088 4669 C 595 87.39 604 reject_vc 0 ALIGNMENT 272 YS2-1h20.q1k vc_4 432 1 5233 5654 C 432 89.81 889 reject_low 7 ALIGNMENT 334 YS2-1h20.p1k vc_6 1 493 3712 4192 F 493 90.87 604 reject_low 6 ALIGNMENT 330 YS2-1h20.p1k vc_7 1 595 13918 14499 F 595 86.89 604 reject_low 5 ALIGNMENT 0 YS2-1h22.q1k vc_2 576 460 2106 2105 C 117 0.00 1291 reject_low 13 ALIGNMENT 0 YS2-1h22.q1k vc_5 62 458 2398 2397 F 397 0.00 1291 reject_low 5 ALIGNMENT 0 YS2-1h22.q1k vc_4 62 418 5831 5830 F 357 0.00 1291 reject_low 9 ALIGNMENT 0 YS2-1h22.q1k vc_7 460 576 100 99 F 117 0.00 1291 reject_low 16 ALIGNMENT 386 YS2-1h22.p1k chr02 33 453 607565 607987 F 421 98.34 472 accept_chi 0 ALIGNMENT 0 YS2-1h22.q1k vc_4 460 459 5872 6353 F 0 0.00 1291 reject_low 9 ALIGNMENT 319 YS2-1h22.q1k vc_3 459 901 2531 2967 F 443 91.87 1291 reject_low 4 ALIGNMENT 38 YS2-1h22.q1k vc_7 422 459 13525 13562 F 38 100.00 1291 reject_low 17 ALIGNMENT 319 YS2-1h22.q1k vc_7 901 459 2291 2727 C 443 91.87 1291 reject_low 6 ALIGNMENT 36 YS2-1h22.q1k vc_5 456 421 1 36 C 36 100.00 1291 reject_low 18 ALIGNMENT 0 YS2-1h22.q1k vc_5 420 62 5064 5063 C 359 0.00 1291 reject_low 15 ALIGNMENT 0 YS2-1h22.q1k vc_7 618 62 6412 6411 C 557 0.00 1291 reject_low 10 ALIGNMENT 0 YS2-1h22.q1k vc_5 576 460 5026 5025 C 117 0.00 1291 reject_low 15 ALIGNMENT 0 YS2-1h22.p1k chr02 454 472 607987 607986 F 19 0.00 472 accept_chi 0 ALIGNMENT 0 YS2-1h22.q1k vc_4 62 458 126 125 F 397 0.00 1291 reject_low 8 ALIGNMENT 48 YS2-1h22.q1k vc_7 670 619 6360 6411 C 52 98.08 1291|1,0 reject_low 10 ALIGNMENT 0 YS2-1h22.q1k vc_2 62 458 2164 2163 F 397 0.00 1291 reject_low 3 ALIGNMENT 312 YS2-1h22.q1k vc_4 901 459 5374 5812 C 443 91.42 1291 reject_low 7 ALIGNMENT 0 YS2-1h22.q1k chr02 576 419 607566 607565 C 158 0.00 1291 accept_chi 1 ALIGNMENT 0 YS2-1h22.q1k vc_7 458 62 2728 2727 C 397 0.00 1291 reject_low 6 ALIGNMENT 154 YS2-1h22.q1k vc_4 459 620 6353 6514 F 162 98.77 1291|1,0 reject_low 9 ALIGNMENT 0 YS2-1h22.q1k vc_1 576 460 2473 2472 C 117 0.00 1291 reject_low 12 ALIGNMENT 0 YS2-1h22.q1k vc_4 458 62 5813 5812 C 397 0.00 1291 reject_low 7 ALIGNMENT 0 YS2-1h22.q1k vc_3 418 62 2513 2512 C 357 0.00 1291 reject_low 14 ALIGNMENT 154 YS2-1h22.q1k vc_4 459 620 126 287 F 162 98.77 1291 reject_low 8 ALIGNMENT 0 YS2-1h22.q1k vc_1 62 458 2531 2530 F 397 0.00 1291 reject_low 2 ALIGNMENT 0 YS2-1h22.q1k vc_2 418 62 2146 2145 C 357 0.00 1291 reject_low 13 ALIGNMENT 0 YS2-1h22.q1k vc_7 62 421 63 62 F 360 0.00 1291 reject_low 16 ALIGNMENT 0 YS2-1h22.q1k vc_4 458 62 1535 1534 C 397 0.00 1291 reject_low 11 ALIGNMENT 0 YS2-1h22.q1k vc_7 460 576 13562 13561 F 117 0.00 1291 reject_low 17 ALIGNMENT 0 YS2-1h22.q1k vc_5 576 457 2 1 C 120 0.00 1291 reject_low 18 ALIGNMENT 38 YS2-1h22.q1k vc_7 422 459 63 100 F 38 100.00 1291 reject_low 16 ALIGNMENT 319 YS2-1h22.q1k vc_1 459 901 2531 2967 F 443 91.87 1291 reject_low 2 ALIGNMENT 87 YS2-1h22.q1k vc_4 547 459 1446 1534 C 89 100.00 1291 reject_low 11 ALIGNMENT 116 YS2-1h22.q1k vc_7 901 669 4946 5172 C 233 85.41 1291|0,1 reject_low 10 ALIGNMENT 0 YS2-1h22.q1k vc_3 576 460 2473 2472 C 117 0.00 1291 reject_low 14 ALIGNMENT 41 YS2-1h22.q1k vc_3 459 419 2472 2512 C 41 100.00 1291 reject_low 14 ALIGNMENT 0 YS2-1h22.q1k vc_7 62 421 13525 13524 F 360 0.00 1291 reject_low 17 ALIGNMENT 41 YS2-1h22.q1k vc_2 459 419 2105 2145 C 41 100.00 1291 reject_low 13 ALIGNMENT 319 YS2-1h22.q1k vc_2 459 901 2164 2600 F 443 91.87 1291 reject_low 3 ALIGNMENT 0 YS2-1h22.q1k vc_7 669 670 5172 6360 C 0 0.00 1291 reject_low 10 ALIGNMENT 0 YS2-1h22.q1k vc_1 418 62 2513 2512 C 357 0.00 1291 reject_low 12 ALIGNMENT 41 YS2-1h22.q1k vc_1 459 419 2472 2512 C 41 100.00 1291 reject_low 12 ALIGNMENT 0 YS2-1h22.q1k vc_4 576 548 1447 1446 C 29 0.00 1291 reject_low 11 ALIGNMENT 39 YS2-1h22.q1k vc_5 459 421 5025 5063 C 39 100.00 1291 reject_low 15 ALIGNMENT 376 YS2-1h22.q1k chr02 418 4 607565 607981 C 415 98.07 1291 accept_chi 1 ALIGNMENT 0 YS2-1h22.q1k vc_3 62 458 2531 2530 F 397 0.00 1291 reject_low 4 ALIGNMENT 41 YS2-1h22.q1k vc_4 419 459 5831 5871 F 41 100.00 1291 reject_low 9 ALIGNMENT 319 YS2-1h22.q1k vc_5 459 901 2398 2834 F 443 91.87 1291 reject_low 5 ALIGNMENT 0 YS2-1h22.q1k vc_5 420 62 37 36 C 359 0.00 1291 reject_low 18 ALIGNMENT 358 YS2-1h23.p1k vc_1 567 1 1203 1749 C 567 89.95 620 reject_low 3 ALIGNMENT 361 YS2-1h23.p1k vc_5 567 1 4123 4669 C 567 90.12 620 reject_vc 0 ALIGNMENT 248 YS2-1h23.q1k vc_1 1 296 2689 2983 F 296 95.27 834 reject_low 8 ALIGNMENT 51 YS2-1h23.q1k vc_7 54 3 6360 6411 C 52 100.00 834|1,0 reject_low 11 ALIGNMENT 358 YS2-1h23.p1k vc_3 567 1 1203 1749 C 567 89.95 620 reject_low 5 ALIGNMENT 0 YS2-1h23.q1k vc_7 53 54 5172 6360 C 0 0.00 834 reject_low 11 ALIGNMENT 352 YS2-1h23.p1k vc_7 1 567 13918 14464 F 567 89.59 620 reject_low 6 ALIGNMENT 285 YS2-1h23.q1k vc_5 1 420 2556 2965 F 420 91.19 834 reject_vc 0 ALIGNMENT 358 YS2-1h23.p1k vc_2 567 1 1203 1749 C 567 89.95 620 reject_low 4 ALIGNMENT 248 YS2-1h23.q1k vc_2 1 296 2322 2616 F 296 95.27 834 reject_low 9 ALIGNMENT 248 YS2-1h23.q1k vc_3 1 296 2689 2983 F 296 95.27 834 reject_low 10 ALIGNMENT 278 YS2-1h23.q1k vc_4 420 1 5243 5654 C 420 90.71 834 reject_low 7 ALIGNMENT 361 YS2-1h23.p1k vc_6 1 567 3712 4258 F 567 90.12 620 reject_low 2 ALIGNMENT 285 YS2-1h23.q1k vc_7 420 1 2160 2569 C 420 91.19 834 reject_vc 1 ALIGNMENT 352 YS2-1h23.p1k vc_7 1 567 456 1002 F 567 89.59 620 reject_vc 1 ALIGNMENT 193 YS2-1h23.q1k vc_7 296 53 4930 5172 C 244 93.85 834|0,1 reject_low 11 ALIGNMENT 954 YS2-1h24.p1k chr08 34 1201 367508 368673 F 1168 94.43 1240 accept 0 ALIGNMENT 785 YS2-1h24.q1k chr08 953 23 368999 369919 C 931 96.03 1433 accept 0 ALIGNMENT 301 YS2-1i01.q1k vc_2 1 302 2322 2623 F 302 100.00 940 reject_vc 5 ALIGNMENT 63 YS2-1i01.q1k vc_4 238 302 1548 1612 F 65 100.00 940 reject_vc 7 ALIGNMENT 246 YS2-1i01.q1k vc_7 302 53 4923 5172 C 250 99.60 940|0,1 reject_low 8 ALIGNMENT 170 YS2-1i01.q1k vc_4 308 661 1879 2220 F 354 85.31 940 reject_vc 7 ALIGNMENT 63 YS2-1i01.q1k vc_4 302 238 48 112 C 65 100.00 940 reject_low 9 ALIGNMENT 63 YS2-1i01.q1k vc_4 302 238 6275 6339 C 65 100.00 940 reject_low 10 ALIGNMENT 0 YS2-1i01.q1k vc_4 237 62 6340 6339 C 176 0.00 940 reject_low 10 ALIGNMENT 301 YS2-1i01.q1k vc_1 1 302 2689 2990 F 302 100.00 940 reject_vc 4 ALIGNMENT 403 YS2-1i01.q1k vc_4 414 1 5239 5654 C 414 99.28 940 reject_vc 3 ALIGNMENT 0 YS2-1i01.p1k chrm 232 214 22934 22933 C 19 0.00 232 accept 2 ALIGNMENT 109 YS2-1i01.q1k vc_7 414 305 4590 4699 C 110 100.00 940 reject_low 8 ALIGNMENT 0 YS2-1i01.q1k vc_4 237 62 113 112 C 176 0.00 940 reject_low 9 ALIGNMENT 476 YS2-1i01.q1k vc_7 661 1 1921 2569 C 661 91.98 940 reject_vc 1 ALIGNMENT 0 YS2-1i01.q1k vc_7 304 303 4700 4922 C 2 0.00 940 reject_low 8 ALIGNMENT 476 YS2-1i01.q1k vc_5 1 661 2556 3204 F 661 91.98 940 reject_vc 0 ALIGNMENT 0 YS2-1i01.q1k vc_4 62 237 1548 1547 F 176 0.00 940 reject_vc 7 ALIGNMENT 132 YS2-1i01.p1k chrm 213 35 22933 23112 C 179 99.44 232 accept 2 ALIGNMENT 0 YS2-1i01.q1k vc_4 303 307 1613 1878 F 5 0.00 940 reject_vc 7 ALIGNMENT 0 YS2-1i01.q1k vc_7 53 54 5172 6360 C 0 0.00 940 reject_low 8 ALIGNMENT 301 YS2-1i01.q1k vc_3 1 302 2689 2990 F 302 100.00 940 reject_vc 6 ALIGNMENT 51 YS2-1i01.q1k vc_7 54 3 6360 6411 C 52 100.00 940|1,0 reject_low 8 ALIGNMENT 765 YS2-1i02.q1k chr12 31 922 453072 453958 F 892 95.96 1237 accept 0 ALIGNMENT 1007 YS2-1i02.p1k chr12 1209 29 466172 467342 C 1181 96.02 1209 accept 0,1 ALIGNMENT 1002 YS2-1i02.p1k chr12 1178 29 457066 458205 C 1150 96.61 1209 reject_low 2 ALIGNMENT 765 YS2-1i02.q1k chr12 31 922 462209 463095 F 892 95.96 1237 accept 1 ALIGNMENT 0 YS2-1i03.p1k chr11 202 184 274884 274883 C 19 0.00 202 accept 0 ALIGNMENT 138 YS2-1i03.p1k chr11 183 35 274883 275031 C 149 98.66 202 accept 0 ALIGNMENT 880 YS2-1i04.q1k chr12 1077 35 457351 458398 C 1043 95.59 1428 accept 0 ALIGNMENT 880 YS2-1i04.q1k chr12 1077 35 466488 467535 C 1043 95.59 1428 accept 1 ALIGNMENT 996 YS2-1i04.p1k chr12 36 1160 465517 466653 F 1125 97.07 1279 accept 1 ALIGNMENT 996 YS2-1i04.p1k chr12 36 1160 456380 457516 F 1125 97.07 1279 accept 0 ALIGNMENT 0 YS2-1i06.q1k chr12 97 539 242329 242675 F 443 0.00 1355 reject_low 1 ALIGNMENT 828 YS2-1i06.q1k chr07 27 1006 920605 921580 F 980 95.82 1355 accept 0 ALIGNMENT 54 YS2-1i06.q1k chr12 27 96 242258 242328 F 70 92.86 1355 reject_low 1 ALIGNMENT 952 YS2-1i06.p1k chr07 1123 39 923983 925061 C 1085 96.68 1261 accept 0 ALIGNMENT 247 YS2-1i06.q1k chr12 540 1006 242676 243137 F 467 85.22 1355 reject_low 1 ALIGNMENT 742 YS2-1i07.q1k chr12 27 940 505847 506744 F 914 95.95 1487 accept 0 ALIGNMENT 985 YS2-1i07.p1k chr12 1195 31 509285 510462 C 1165 95.54 1208 accept 0 ALIGNMENT 26 YS2-1i07.p1k chr12 46 71 510421 510446 F 26 100.00 1208 reject_low 1 ALIGNMENT 0 YS2-1i07.p1k chr12 72 873 510446 510445 F 802 0.00 1208 reject_low 1 ALIGNMENT 49 YS2-1i08.p1k chr04 33 93 427458 427518 F 61 96.72 1159 reject_low 1 ALIGNMENT 986 YS2-1i08.p1k chr04 33 1142 427512 428623 F 1110 96.85 1159 accept 0 ALIGNMENT 0 YS2-1i08.p1k chr04 97 799 427467 427466 F 703 0.00 1159 reject_low 2 ALIGNMENT 755 YS2-1i08.q1k chr04 990 31 432201 433162 C 960 95.00 1359 accept 0 ALIGNMENT 0 YS2-1i08.p1k chr04 94 799 427518 427517 F 706 0.00 1159 reject_low 1 ALIGNMENT 43 YS2-1i08.p1k chr04 33 96 427404 427467 F 64 92.19 1159 reject_low 2 ALIGNMENT 0 YS2-1i10.p1k chr06 286 268 68069 68068 C 19 0.00 286 accept 0 ALIGNMENT 211 YS2-1i10.p1k chr06 267 36 68068 68299 C 232 99.57 286 accept 0 ALIGNMENT 39 YS2-1i11.q1k vc_5 295 257 5025 5063 C 39 100.00 295 reject_low 7 ALIGNMENT 0 YS2-1i11.q1k vc_5 256 62 37 36 C 195 0.00 295 reject_low 9 ALIGNMENT 0 YS2-1i11.q1k vc_1 254 62 2513 2512 C 193 0.00 295 reject_low 4 ALIGNMENT 0 YS2-1i11.q1k vc_5 256 62 5064 5063 C 195 0.00 295 reject_low 7 ALIGNMENT 0 YS2-1i11.q1k chr14 62 102 252059 252058 F 41 0.00 295 manual 3 ALIGNMENT 36 YS2-1i11.q1k vc_5 292 257 1 36 C 36 100.00 295 reject_low 9 ALIGNMENT 125 YS2-1i11.p1k chr14 189 37 252059 252211 C 153 94.12 286 manual 2 ALIGNMENT 0 YS2-1i11.q1k vc_7 62 257 13525 13524 F 196 0.00 295 reject_low 8 ALIGNMENT 0 YS2-1i11.p1k chr04 286 269 43987 43986 C 18 0.00 286 manual 0 ALIGNMENT 41 YS2-1i11.q1k vc_1 295 255 2472 2512 C 41 100.00 295 reject_low 4 ALIGNMENT 125 YS2-1i11.q1k chr14 103 255 252059 252211 F 153 94.12 295 manual 3 ALIGNMENT 226 YS2-1i11.p1k chr04 268 37 43986 44217 C 232 100.00 286 manual 0 ALIGNMENT 0 YS2-1i11.q1k vc_4 62 254 5831 5830 F 193 0.00 295 reject_low 6 ALIGNMENT 0 YS2-1i11.p1k chr14 286 190 252060 252059 C 97 0.00 286 manual 2 ALIGNMENT 38 YS2-1i11.q1k vc_7 258 295 13525 13562 F 38 100.00 295 reject_low 8 ALIGNMENT 0 YS2-1i11.q1k vc_3 254 62 2513 2512 C 193 0.00 295 reject_low 5 ALIGNMENT 41 YS2-1i11.q1k vc_4 255 295 5831 5871 F 41 100.00 295 reject_low 6 ALIGNMENT 41 YS2-1i11.q1k vc_3 295 255 2472 2512 C 41 100.00 295 reject_low 5 ALIGNMENT 217 YS2-1i11.q1k chr04 26 255 43986 44217 F 230 99.13 295 manual 1 ALIGNMENT 0 YS2-1i11.q1k chr04 256 295 44217 44216 F 40 0.00 295 manual 1 ALIGNMENT 0 YS2-1i11.q1k chr14 256 295 252211 252210 F 40 0.00 295 manual 3 ALIGNMENT 41 YS2-1i12.q1k vc_4 419 459 5831 5871 F 41 100.00 459 reject_vc 10 ALIGNMENT 273 YS2-1i12.p1k vc_6 1 418 3712 4138 F 418 89.23 512 reject_vc 4 ALIGNMENT 273 YS2-1i12.p1k vc_3 418 1 1323 1749 C 418 89.23 512 reject_vc 2 ALIGNMENT 38 YS2-1i12.q1k vc_7 422 459 13525 13562 F 38 100.00 459 reject_vc 12 ALIGNMENT 0 YS2-1i12.q1k vc_5 420 62 37 36 C 359 0.00 459 reject_vc 13 ALIGNMENT 0 YS2-1i12.q1k vc_2 418 62 2146 2145 C 357 0.00 459 reject_vc 8 ALIGNMENT 39 YS2-1i12.q1k vc_5 459 421 5025 5063 C 39 100.00 459 reject_vc 11 ALIGNMENT 0 YS2-1i12.q1k vc_1 418 62 2513 2512 C 357 0.00 459 reject_vc 7 ALIGNMENT 41 YS2-1i12.q1k vc_1 459 419 2472 2512 C 41 100.00 459 reject_vc 7 ALIGNMENT 267 YS2-1i12.p1k vc_7 1 418 456 882 F 418 88.76 512 reject_vc 5 ALIGNMENT 41 YS2-1i12.q1k vc_3 459 419 2472 2512 C 41 100.00 459 reject_vc 9 ALIGNMENT 36 YS2-1i12.q1k vc_5 456 421 1 36 C 36 100.00 459 reject_vc 13 ALIGNMENT 0 YS2-1i12.q1k vc_7 62 421 13525 13524 F 360 0.00 459 reject_vc 12 ALIGNMENT 41 YS2-1i12.q1k vc_2 459 419 2105 2145 C 41 100.00 459 reject_vc 8 ALIGNMENT 0 YS2-1i12.q1k vc_3 418 62 2513 2512 C 357 0.00 459 reject_vc 9 ALIGNMENT 0 YS2-1i12.q1k vc_4 62 418 5831 5830 F 357 0.00 459 reject_vc 10 ALIGNMENT 273 YS2-1i12.p1k vc_1 418 1 1323 1749 C 418 89.23 512 reject_vc 0 ALIGNMENT 273 YS2-1i12.p1k vc_5 418 1 4243 4669 C 418 89.23 512 reject_vc 3 ALIGNMENT 0 YS2-1i12.q1k vc_5 420 62 5064 5063 C 359 0.00 459 reject_vc 11 ALIGNMENT 273 YS2-1i12.p1k vc_2 418 1 1323 1749 C 418 89.23 512 reject_vc 1 ALIGNMENT 267 YS2-1i12.p1k vc_7 1 418 13918 14344 F 418 88.76 512 reject_vc 6 ALIGNMENT 924 YS2-1i14.p1k chr16 37 1151 362828 363955 F 1115 95.70 1284 accept 0 ALIGNMENT 852 YS2-1i14.q1k chr16 1082 26 366129 367175 C 1057 95.27 1413 accept 0 ALIGNMENT 693 YS2-1i16.q1k chr12 933 44 523286 524170 C 890 93.93 1381 accept_chi 1 ALIGNMENT 966 YS2-1i16.p1k chr07 42 1194 257744 258911 F 1153 96.10 1200 accept_chi 0 ALIGNMENT 828 YS2-1i17.q1k chr12 36 996 463511 464474 F 961 96.15 1325 accept 1 ALIGNMENT 828 YS2-1i17.q1k chr12 36 996 454374 455337 F 961 96.15 1325 accept 0 ALIGNMENT 747 YS2-1i18.q1k chr07 869 1 1063737 1064598 C 869 96.43 1424 accept 0 ALIGNMENT 0 YS2-1i19.q1k vc_5 479 62 37 36 C 418 0.00 1207 reject_low 16 ALIGNMENT 36 YS2-1i19.q1k vc_5 518 480 5025 5063 C 39 97.44 1207 reject_low 14 ALIGNMENT 67 YS2-1i19.q1k vc_4 603 518 1449 1534 C 86 93.02 1207 reject_low 10 ALIGNMENT 0 YS2-1i19.q1k vc_7 517 62 2728 2727 C 456 0.00 1207 reject_low 6 ALIGNMENT 37 YS2-1i19.q1k vc_2 518 478 2105 2145 C 41 97.56 1207 reject_low 12 ALIGNMENT 37 YS2-1i19.q1k vc_1 518 478 2472 2512 C 41 97.56 1207 reject_low 11 ALIGNMENT 33 YS2-1i19.q1k vc_5 515 480 1 36 C 36 97.22 1207 reject_low 16 ALIGNMENT 0 YS2-1i19.q1k vc_4 519 518 5872 6353 F 0 0.00 1207 reject_low 9 ALIGNMENT 35 YS2-1i19.q1k vc_7 481 518 13525 13562 F 38 97.37 1207 reject_low 15 ALIGNMENT 0 YS2-1i19.q1k vc_4 517 62 5813 5812 C 456 0.00 1207 reject_low 7 ALIGNMENT 0 YS2-1i19.q1k vc_4 62 477 5831 5830 F 416 0.00 1207 reject_low 9 ALIGNMENT 131 YS2-1i19.q1k vc_5 518 872 2398 2754 F 355 81.13 1207 reject_low 5 ALIGNMENT 0 YS2-1i19.p1k chr13 584 602 826681 826680 F 19 0.00 602 accept_chi 0 ALIGNMENT 0 YS2-1i19.q1k vc_3 62 517 2531 2530 F 456 0.00 1207 reject_low 4 ALIGNMENT 131 YS2-1i19.q1k vc_3 518 872 2531 2887 F 355 81.13 1207 reject_low 4 ALIGNMENT 0 YS2-1i19.q1k vc_1 477 62 2513 2512 C 416 0.00 1207 reject_low 11 ALIGNMENT 37 YS2-1i19.q1k vc_4 478 518 5831 5871 F 41 97.56 1207 reject_low 9 ALIGNMENT 131 YS2-1i19.q1k vc_1 518 872 2531 2887 F 355 81.13 1207 reject_low 2 ALIGNMENT 116 YS2-1i19.q1k vc_4 518 675 6353 6509 F 158 91.77 1207|1,0 reject_low 9 ALIGNMENT 116 YS2-1i19.q1k vc_4 518 675 126 282 F 158 91.77 1207 reject_low 8 ALIGNMENT 0 YS2-1i19.q1k vc_5 62 517 2398 2397 F 456 0.00 1207 reject_low 5 ALIGNMENT 0 YS2-1i19.q1k vc_7 62 480 13525 13524 F 419 0.00 1207 reject_low 15 ALIGNMENT 0 YS2-1i19.q1k vc_4 517 62 1535 1534 C 456 0.00 1207 reject_low 10 ALIGNMENT 0 YS2-1i19.q1k vc_2 62 517 2164 2163 F 456 0.00 1207 reject_low 3 ALIGNMENT 439 YS2-1i19.q1k chr13 477 3 826126 826600 C 475 98.74 1207 accept_chi 1 ALIGNMENT 0 YS2-1i19.q1k vc_3 477 62 2513 2512 C 416 0.00 1207 reject_low 13 ALIGNMENT 0 YS2-1i19.q1k vc_2 477 62 2146 2145 C 416 0.00 1207 reject_low 12 ALIGNMENT 37 YS2-1i19.q1k vc_3 518 478 2472 2512 C 41 97.56 1207 reject_low 13 ALIGNMENT 0 YS2-1i19.q1k vc_5 479 62 5064 5063 C 418 0.00 1207 reject_low 14 ALIGNMENT 126 YS2-1i19.q1k vc_4 872 518 5454 5812 C 355 80.28 1207 reject_low 7 ALIGNMENT 131 YS2-1i19.q1k vc_7 872 518 2371 2727 C 355 80.56 1207 reject_low 6 ALIGNMENT 131 YS2-1i19.q1k vc_2 518 872 2164 2520 F 355 81.13 1207 reject_low 3 ALIGNMENT 0 YS2-1i19.q1k chr13 492 478 826127 826126 C 15 0.00 1207 accept_chi 1 ALIGNMENT 0 YS2-1i19.q1k vc_1 62 517 2531 2530 F 456 0.00 1207 reject_low 2 ALIGNMENT 521 YS2-1i19.p1k chr13 30 583 826126 826681 F 554 99.10 602 accept_chi 0 ALIGNMENT 0 YS2-1i19.q1k vc_4 62 517 126 125 F 456 0.00 1207 reject_low 8 ALIGNMENT 864 YS2-1i20.q1k chr04 33 1104 249308 250398 F 1072 94.96 1290 accept 0 ALIGNMENT 671 YS2-1i21.q1k chr04 926 1 799181 800097 C 926 92.55 1258 accept 0 ALIGNMENT 0 YS2-1i22.p1k chr12 691 674 458722 458721 C 18 0.00 691 accept 0 ALIGNMENT 0 YS2-1i22.p1k chr06 87 691 31729 31728 F 605 0.00 691 reject_low 2 ALIGNMENT 48 YS2-1i22.p1k chr06 32 86 31675 31729 F 55 98.18 691 reject_low 2 ALIGNMENT 589 YS2-1i22.p1k chr12 673 32 467858 468499 C 642 99.22 691 accept 1 ALIGNMENT 0 YS2-1i22.p1k chr12 691 674 467859 467858 C 18 0.00 691 accept 1 ALIGNMENT 589 YS2-1i22.p1k chr12 673 32 458721 459362 C 642 99.22 691 accept 0 ALIGNMENT 598 YS2-1i23.q1k chr12 32 876 459824 460692 F 845 92.19 1325 accept 0 ALIGNMENT 770 YS2-1i23.p1k chr12 981 35 454763 455723 C 947 94.61 993 reject_low 1 ALIGNMENT 770 YS2-1i23.p1k chr12 981 35 463900 464860 C 947 94.61 993 accept 0 ALIGNMENT 199 YS2-1i24.p1k chr14 39 239 60451 60651 F 201 100.00 255 accept 0 ALIGNMENT 0 YS2-1i24.p1k chr14 240 255 60651 60650 F 16 0.00 255 accept 0 ALIGNMENT 327 YS2-1j02.p1k vc_7 1 608 13792 14396 F 608 85.36 639 reject_low 6 ALIGNMENT 0 YS2-1j02.q1k vc_4 573 808 288 1552 F 236 0.00 1354 reject_low 20 ALIGNMENT 333 YS2-1j02.p1k vc_3 608 1 1271 1875 C 608 85.69 639 reject_low 5 ALIGNMENT 239 YS2-1j02.q1k vc_3 408 866 2531 2990 F 459 84.97 1354 reject_low 11 ALIGNMENT 27 YS2-1j02.q1k vc_4 370 408 5833 5871 F 39 89.74 1354 reject_low 15 ALIGNMENT 0 YS2-1j02.q1k vc_4 808 495 108 1450 C 314 0.00 1354 reject_low 21 ALIGNMENT 92 YS2-1j02.q1k vc_4 408 572 6353 6514 F 165 86.67 1354|1,0 reject_low 15 ALIGNMENT 249 YS2-1j02.q1k vc_4 940 408 5277 5812 C 533 83.30 1354 reject_low 8 ALIGNMENT 27 YS2-1j02.q1k vc_3 408 370 2472 2510 C 39 89.74 1354 reject_low 18 ALIGNMENT 33 YS2-1j02.q1k vc_4 809 866 1553 1612 F 58 87.93 1354 reject_low 20 ALIGNMENT 92 YS2-1j02.q1k vc_4 408 572 126 287 F 165 86.67 1354 reject_low 20 ALIGNMENT 334 YS2-1j02.p1k vc_5 637 1 4161 4795 C 637 85.09 639 reject_low 1 ALIGNMENT 29 YS2-1j02.q1k vc_5 408 368 5025 5065 C 41 90.24 1354 reject_low 14 ALIGNMENT 59 YS2-1j02.q1k vc_4 494 408 1451 1534 C 87 91.95 1354 reject_low 21 ALIGNMENT 90 YS2-1j02.p1k vc_4 1 126 6101 6226 F 126 90.48 639 reject_low 13 ALIGNMENT 33 YS2-1j02.q1k vc_4 866 809 6275 6334 C 58 87.93 1354 reject_low 13 ALIGNMENT 333 YS2-1j02.p1k vc_2 608 1 1271 1875 C 608 85.69 639 reject_low 4 ALIGNMENT 322 YS2-1j02.p1k vc_6 1 557 3586 4138 F 557 86.71 639 reject_low 7 ALIGNMENT 33 YS2-1j02.q1k vc_4 866 809 48 107 C 58 87.93 1354 reject_low 21 ALIGNMENT 107 YS2-1j02.q1k vc_7 866 621 4923 5172 C 246 82.11 1354 reject_low 12 ALIGNMENT 239 YS2-1j02.q1k vc_1 408 866 2531 2990 F 459 84.97 1354 reject_low 9 ALIGNMENT 256 YS2-1j02.q1k vc_7 940 408 2194 2727 C 533 83.68 1354 reject_low 2 ALIGNMENT 26 YS2-1j02.q1k vc_5 405 368 1 38 C 38 89.47 1354 reject_low 19 ALIGNMENT 327 YS2-1j02.p1k vc_7 1 608 330 934 F 608 85.36 639 reject_low 2 ALIGNMENT 239 YS2-1j02.q1k vc_2 408 866 2164 2623 F 459 84.97 1354 reject_low 10 ALIGNMENT 27 YS2-1j02.q1k vc_1 408 370 2472 2510 C 39 89.74 1354 reject_low 16 ALIGNMENT 256 YS2-1j02.q1k vc_5 408 940 2398 2931 F 533 83.68 1354 reject_low 1 ALIGNMENT 0 YS2-1j02.q1k vc_4 409 408 5872 6353 F 0 0.00 1354 reject_low 15 ALIGNMENT 27 YS2-1j02.q1k vc_2 408 370 2105 2143 C 39 89.74 1354 reject_low 17 ALIGNMENT 333 YS2-1j02.p1k vc_1 608 1 1271 1875 C 608 85.69 639 reject_low 3 ALIGNMENT 209 YS2-1j02.q1k chr04 27 368 899931 900270 F 342 88.60 1354 accept 0 ALIGNMENT 0 YS2-1j04.p1k chr07 758 62 405559 405558 C 697 0.00 1182 reject_low 1 ALIGNMENT 0 YS2-1j04.p1k chr10 62 765 374414 374413 F 704 0.00 1182 reject_low 5 ALIGNMENT 74 YS2-1j04.p1k chr13 768 847 747885 747964 F 80 97.50 1182 reject_low 8 ALIGNMENT 0 YS2-1j04.p1k chr11 62 767 162486 162485 F 706 0.00 1182 reject_low 7 ALIGNMENT 75 YS2-1j04.p1k chr13 766 847 131817 131898 F 82 97.56 1182 reject_low 6 ALIGNMENT 0 YS2-1j04.p1k chr04 765 62 568959 568958 C 704 0.00 1182 reject_low 3 ALIGNMENT 80 YS2-1j04.p1k chr04 862 766 568863 568958 C 97 94.85 1182 reject_low 3 ALIGNMENT 79 YS2-1j04.p1k chr10 766 853 374414 374501 F 88 96.59 1182 reject_low 5 ALIGNMENT 0 YS2-1j04.p1k chr02 765 62 405952 405951 C 704 0.00 1182 reject_low 4 ALIGNMENT 79 YS2-1j04.p1k chr02 858 766 405860 405951 C 93 95.70 1182 reject_low 4 ALIGNMENT 815 YS2-1j04.q1k chr07 987 26 831491 832446 C 962 96.26 1371 accept 0 ALIGNMENT 0 YS2-1j04.p1k chr10 765 62 355370 355369 C 704 0.00 1182 reject_low 2 ALIGNMENT 90 YS2-1j04.p1k chr07 861 759 405458 405558 C 103 97.09 1182 reject_low 1 ALIGNMENT 72 YS2-1j04.p1k chr07 847 766 736343 736424 C 82 96.34 1182 reject_low 10 ALIGNMENT 0 YS2-1j04.p1k chr13 62 765 131817 131816 F 704 0.00 1182 reject_low 6 ALIGNMENT 74 YS2-1j04.p1k chr11 768 847 162486 162565 F 80 97.50 1182 reject_low 7 ALIGNMENT 73 YS2-1j04.p1k chr05 845 766 138666 138745 C 80 97.50 1182 reject_low 9 ALIGNMENT 942 YS2-1j04.p1k chr07 32 1179 827986 829134 F 1148 95.30 1182 accept 0 ALIGNMENT 0 YS2-1j04.p1k chr05 765 62 138746 138745 C 704 0.00 1182 reject_low 9 ALIGNMENT 0 YS2-1j04.p1k chr07 765 62 736425 736424 C 704 0.00 1182 reject_low 10 ALIGNMENT 0 YS2-1j04.p1k chr13 62 767 747885 747884 F 706 0.00 1182 reject_low 8 ALIGNMENT 85 YS2-1j04.p1k chr10 861 766 355275 355369 C 96 96.88 1182 reject_low 2 ALIGNMENT 951 YS2-1j07.p1k chr04 42 1106 427512 428579 F 1065 97.00 1143 accept 0 ALIGNMENT 0 YS2-1j07.p1k chr04 106 805 427467 427466 F 700 0.00 1143 reject_low 2 ALIGNMENT 794 YS2-1j07.q1k chr04 1038 30 432168 433162 C 1009 95.04 1413 accept 0 ALIGNMENT 43 YS2-1j07.p1k chr04 42 105 427404 427467 F 64 92.19 1143 reject_low 2 ALIGNMENT 49 YS2-1j07.p1k chr04 42 102 427458 427518 F 61 96.72 1143 reject_low 1 ALIGNMENT 0 YS2-1j07.p1k chr04 103 805 427518 427517 F 703 0.00 1143 reject_low 1 ALIGNMENT 726 YS2-1j08.q1k chr16 1 886 816045 816929 F 886 95.82 1340 accept_chi 1 ALIGNMENT 932 YS2-1j08.p1k chr11 37 1177 460931 462086 F 1141 95.88 1202 accept_chi 0 ALIGNMENT 914 YS2-1j10.p1k chr07 34 1161 332055 333197 F 1128 94.86 1229 accept 0 ALIGNMENT 837 YS2-1j10.q1k chr07 1034 32 332808 333822 C 1003 95.61 1350 accept 0 ALIGNMENT 0 YS2-1j11.q1k vc_4 237 62 113 112 C 176 0.00 825 reject_vc 9 ALIGNMENT 51 YS2-1j11.q1k vc_7 54 3 6360 6411 C 52 100.00 825|1,0 reject_vc 8 ALIGNMENT 0 YS2-1j11.q1k vc_4 237 62 6340 6339 C 176 0.00 825 reject_vc 10 ALIGNMENT 271 YS2-1j11.q1k vc_1 1 302 2689 2990 F 302 96.69 825 reject_vc 5 ALIGNMENT 31 YS2-1j11.q1k vc_7 429 310 4587 4695 C 120 81.67 825 reject_vc 8 ALIGNMENT 40 YS2-1j11.q1k vc_4 238 302 1548 1612 F 65 89.23 825 reject_vc 11 ALIGNMENT 0 YS2-1j11.q1k vc_7 309 303 4696 4922 C 7 0.00 825 reject_vc 8 ALIGNMENT 330 YS2-1j11.p1k chr12 371 34 463844 464181 C 338 100.00 388 accept 1 ALIGNMENT 300 YS2-1j11.q1k vc_5 1 436 2556 2979 F 436 91.51 825 reject_vc 2 ALIGNMENT 40 YS2-1j11.q1k vc_4 302 238 6275 6339 C 65 89.23 825 reject_vc 10 ALIGNMENT 271 YS2-1j11.q1k vc_2 1 302 2322 2623 F 302 96.69 825 reject_vc 6 ALIGNMENT 31 YS2-1j11.q1k vc_4 310 436 1880 1995 F 127 81.10 825 reject_vc 11 ALIGNMENT 292 YS2-1j11.q1k vc_4 429 1 5236 5654 C 429 91.38 825 reject_vc 4 ALIGNMENT 0 YS2-1j11.q1k vc_7 53 54 5172 6360 C 0 0.00 825 reject_vc 8 ALIGNMENT 0 YS2-1j11.p1k chr12 388 372 454708 454707 C 17 0.00 388 accept 0 ALIGNMENT 0 YS2-1j11.q1k vc_4 62 237 1548 1547 F 176 0.00 825 reject_vc 11 ALIGNMENT 271 YS2-1j11.q1k vc_3 1 302 2689 2990 F 302 96.69 825 reject_vc 7 ALIGNMENT 40 YS2-1j11.q1k vc_4 302 238 48 112 C 65 89.23 825 reject_vc 9 ALIGNMENT 0 YS2-1j11.p1k chr12 388 372 463845 463844 C 17 0.00 388 accept 1 ALIGNMENT 330 YS2-1j11.p1k chr12 371 34 454707 455044 C 338 100.00 388 accept 0 ALIGNMENT 217 YS2-1j11.q1k vc_7 302 53 4923 5172 C 250 95.60 825|0,1 reject_vc 8 ALIGNMENT 300 YS2-1j11.q1k vc_7 436 1 2146 2569 C 436 91.51 825 reject_vc 3 ALIGNMENT 0 YS2-1j11.q1k vc_4 303 309 1613 1879 F 7 0.00 825 reject_vc 11 ALIGNMENT 780 YS2-1j12.q1k chr07 945 32 270212 271114 C 914 96.28 1448 accept 0 ALIGNMENT 703 YS2-1j13.q1k chr16 896 3 366279 367168 C 894 94.18 1368 accept 0 ALIGNMENT 974 YS2-1j13.p1k chr16 36 1222 362828 364020 F 1187 95.03 1323 accept 0 ALIGNMENT 160 YS2-1j14.p1k chr05 38 215 349344 349520 F 178 99.44 234 accept 0 ALIGNMENT 0 YS2-1j14.p1k chr05 216 234 349520 349519 F 19 0.00 234 accept 0 ALIGNMENT 247 YS2-1j15.p1k chr05 33 295 549026 549288 F 263 98.86 314 accept 0 ALIGNMENT 0 YS2-1j15.p1k chr05 296 314 549288 549287 F 19 0.00 314 accept 0 ALIGNMENT 666 YS2-1j16.q1k chr14 837 1 426815 427645 C 837 93.79 1228 accept 0 ALIGNMENT 811 YS2-1j16.p1k chr14 61 1019 423448 424419 F 959 96.14 1166 accept 0 ALIGNMENT 858 YS2-1j17.q1k chr12 1052 27 456580 457614 C 1026 95.22 1293 accept 0 ALIGNMENT 858 YS2-1j17.q1k chr12 1052 27 465717 466751 C 1026 95.22 1293 accept 1 ALIGNMENT 779 YS2-1j19.q1k chr15 999 26 602220 603181 C 974 95.48 1354 accept_trans 0 ALIGNMENT 542 YS2-1j19.p1k chr15 152 798 592777 593408 F 647 96.45 1061 accept_trans 0 ALIGNMENT 0 YS2-1j20.p1k chr14 229 247 727351 727350 F 19 0.00 247 accept 0 ALIGNMENT 180 YS2-1j20.p1k chr14 32 228 727154 727351 F 197 97.97 247 accept 0 ALIGNMENT 735 YS2-1j23.q1k chr10 7 888 124859 125732 F 882 95.80 1277 accept 0 ALIGNMENT 297 YS2-1j23.p1k chr10 693 252 129653 130079 C 442 92.08 1187 accept 0 ALIGNMENT 55 YS2-1k01.p1k chr05 955 829 575180 575306 C 127 81.89 1174 reject_low 215 ALIGNMENT 209 YS2-1k01.p1k chr06 710 1140 1001 1434 F 431 83.53 1174 reject_low 53 ALIGNMENT 229 YS2-1k01.p1k chr05 721 1163 1805 2250 F 443 84.42 1174 reject_low 21 ALIGNMENT 0 YS2-1k01.p1k chr08 781 62 560842 560841 C 720 0.00 1174 reject_low 192 ALIGNMENT 77 YS2-1k01.p1k chr12 709 882 7577 7750 F 174 82.76 1174 reject_low 185 ALIGNMENT 94 YS2-1k01.p1k chr05 746 955 1470 1679 F 210 82.86 1174 reject_low 61 ALIGNMENT 139 YS2-1k01.p1k chr14 710 974 1646 1910 F 265 85.28 1174 reject_low 114 ALIGNMENT 0 YS2-1k01.p1k chr15 828 62 1089643 1089642 C 767 0.00 1174 reject_low 220 ALIGNMENT 77 YS2-1k01.p1k chr13 709 882 1918 2091 F 174 82.76 1174 reject_low 186 ALIGNMENT 74 YS2-1k01.p1k chr16 851 713 946101 946239 C 139 85.61 1174 reject_low 201 ALIGNMENT 199 YS2-1k01.p1k chr14 713 974 1685 1946 F 262 93.13 1174 reject_low 75 ALIGNMENT 0 YS2-1k01.p1k chr12 869 789 1069625 1069624 C 81 0.00 1174 reject_low 38 ALIGNMENT 37 YS2-1k01.p1k chr08 721 815 1806 1900 F 95 81.05 1174 reject_low 276 ALIGNMENT 0 YS2-1k01.p1k chr15 864 62 1089643 1089642 C 803 0.00 1174 reject_low 244 ALIGNMENT 49 YS2-1k01.p1k chr16 865 955 1494 1584 F 91 85.71 1174 reject_low 245 ALIGNMENT 0 YS2-1k01.p1k chr12 62 709 1827 1826 F 648 0.00 1174 reject_low 147 ALIGNMENT 151 YS2-1k01.p1k chr08 974 710 560505 560769 C 265 86.79 1174 reject_low 90 ALIGNMENT 0 YS2-1k01.p1k chr12 62 709 7398 7397 F 648 0.00 1174 reject_low 112 ALIGNMENT 0 YS2-1k01.p1k chr09 62 781 1686 1685 F 720 0.00 1174 reject_low 193 ALIGNMENT 146 YS2-1k01.p1k chr16 902 710 946086 946278 C 193 93.26 1174 reject_low 100 ALIGNMENT 0 YS2-1k01.q1k chr12 739 426 4012 4011 C 314 0.00 1319 reject_low 16 ALIGNMENT 0 YS2-1k01.p1k chr15 869 789 1089252 1089251 C 81 0.00 1174 reject_low 270 ALIGNMENT 0 YS2-1k01.p1k chr02 62 709 2242 2241 F 648 0.00 1174 reject_low 180 ALIGNMENT 55 YS2-1k01.p1k chr04 955 829 1530351 1530477 C 127 81.89 1174 reject_low 214 ALIGNMENT 0 YS2-1k01.p1k chr16 709 62 946207 946206 C 648 0.00 1174 reject_low 235 ALIGNMENT 47 YS2-1k01.p1k chr04 846 710 1530064 1530200 C 137 79.56 1174 reject_low 247 ALIGNMENT 0 YS2-1k01.p1k chr14 62 720 1801 1800 F 659 0.00 1174 reject_low 144 ALIGNMENT 49 YS2-1k01.p1k chr12 865 955 7337 7427 F 91 85.71 1174|9,0 reject_low 298 ALIGNMENT 33 YS2-1k01.p1k chr07 774 709 1088970 1089035 C 66 84.85 1174 reject_low 280 ALIGNMENT 0 YS2-1k01.p1k chr12 745 62 1076690 1076689 C 684 0.00 1174 reject_low 31 ALIGNMENT 0 YS2-1k01.p1k chr16 889 62 946495 946494 C 828 0.00 1174 reject_low 254 ALIGNMENT 788 YS2-1k01.p1k chr16 955 32 946249 947172 C 924 95.45 1174 reject_low 15 ALIGNMENT 34 YS2-1k01.p1k chr09 796 866 2312 2382 F 71 83.10 1174 reject_low 303 ALIGNMENT 0 YS2-1k01.p1k chr02 62 720 2073 2072 F 659 0.00 1174 reject_low 126 ALIGNMENT 0 YS2-1k01.p1k chr08 745 62 560842 560841 C 684 0.00 1174 reject_low 171 ALIGNMENT 139 YS2-1k01.p1k chr07 974 710 1089058 1089322 C 265 85.28 1174 reject_low 111 ALIGNMENT 0 YS2-1k01.p1k chr05 62 720 1805 1804 F 659 0.00 1174 reject_low 21 ALIGNMENT 0 YS2-1k01.p1k chr12 62 864 1694 1693 F 803 0.00 1174 reject_low 224 ALIGNMENT 0 YS2-1k01.p1k chr08 712 62 560731 560730 C 651 0.00 1174 reject_low 83 ALIGNMENT 0 YS2-1k01.p1k chr13 62 781 1667 1666 F 720 0.00 1174 reject_low 195 ALIGNMENT 0 YS2-1k01.p1k chr12 62 712 7473 7472 F 651 0.00 1174 reject_low 46 ALIGNMENT 128 YS2-1k01.p1k chr12 918 721 1076265 1076462 C 198 89.39 1174 reject_low 29 ALIGNMENT 147 YS2-1k01.p1k chr12 721 974 1874 2127 F 254 87.01 1174 reject_low 97 ALIGNMENT 136 YS2-1k01.p1k chr12 974 710 1069690 1069954 C 265 84.91 1174 reject_low 26 ALIGNMENT 0 YS2-1k01.p1k chr16 62 781 1483 1482 F 720 0.00 1174 reject_low 198 ALIGNMENT 0 YS2-1k01.p1k chr05 62 709 1686 1685 F 648 0.00 1174 reject_low 54 ALIGNMENT 41 YS2-1k01.p1k chr12 959 890 1076620 1076689 C 70 87.14 1174 reject_low 37 ALIGNMENT 119 YS2-1k01.p1k chr09 721 976 2021 2276 F 256 83.20 1174 reject_low 148 ALIGNMENT 0 YS2-1k01.q1k chr12 803 910 1067096 1067124 F 108 0.00 1319 reject_low 9 ALIGNMENT 73 YS2-1k01.p1k chr05 782 955 1470 1643 F 174 81.61 1174 reject_low 63 ALIGNMENT 50 YS2-1k01.p1k chr07 846 710 1088970 1089106 C 137 80.29 1174 reject_low 230 ALIGNMENT 33 YS2-1k01.p1k chr13 709 774 2026 2091 F 66 84.85 1174 reject_low 282 ALIGNMENT 0 YS2-1k01.p1k chr06 62 708 1072 1071 F 647 0.00 1174 reject_low 227 ALIGNMENT 0 YS2-1k01.p1k chr12 709 62 1076654 1076653 C 648 0.00 1174 reject_low 25 ALIGNMENT 79 YS2-1k01.p1k chr12 955 782 1076516 1076689 C 174 82.76 1174 reject_low 32 ALIGNMENT 0 YS2-1k01.p1k chr12 62 745 1683 1682 F 684 0.00 1174 reject_low 158 ALIGNMENT 87 YS2-1k01.p1k chr04 974 746 1530260 1530488 C 229 80.35 1174 reject_low 168 ALIGNMENT 0 YS2-1k01.p1k chr08 765 869 1921 1920 F 105 0.00 1174 reject_low 286 ALIGNMENT 0 YS2-1k01.p1k chr08 720 62 560615 560614 C 659 0.00 1174 reject_low 118 ALIGNMENT 0 YS2-1k01.p1k chr10 62 745 1669 1668 F 684 0.00 1174 reject_low 162 ALIGNMENT 0 YS2-1k01.p1k chr12 709 62 1069955 1069954 C 648 0.00 1174 reject_low 26 ALIGNMENT 49 YS2-1k01.p1k chr13 865 955 1678 1768 F 91 85.71 1174 reject_low 242 ALIGNMENT 0 YS2-1k01.p1k chr05 62 889 1470 1469 F 828 0.00 1174 reject_low 67 ALIGNMENT 53 YS2-1k01.p1k chr05 709 866 1901 2058 F 158 79.11 1174 reject_low 66 ALIGNMENT 0 YS2-1k01.p1k chr12 62 720 7553 7552 F 659 0.00 1174 reject_low 142 ALIGNMENT 0 YS2-1k01.p1k chr10 62 889 1669 1668 F 828 0.00 1174 reject_low 288 ALIGNMENT 33 YS2-1k01.p1k chr12 774 709 1076265 1076330 C 66 84.85 1174 reject_low 297 ALIGNMENT 49 YS2-1k01.p1k chr08 890 970 1651 1731 F 81 87.65 1174 reject_low 222 ALIGNMENT 0 YS2-1k01.p1k chr10 62 709 1813 1812 F 648 0.00 1174 reject_low 120 ALIGNMENT 814 YS2-1k01.p1k chr15 974 32 1089389 1090331 C 943 95.76 1174 ambiguous_tel 2 ALIGNMENT 128 YS2-1k01.p1k chr02 710 955 2026 2271 F 246 85.37 1174 reject_low 138 ALIGNMENT 0 YS2-1k01.p1k chr02 62 712 1597 1596 F 651 0.00 1174 reject_low 137 ALIGNMENT 41 YS2-1k01.p1k chr02 890 959 1486 1555 F 70 87.14 1174 reject_low 255 ALIGNMENT 0 YS2-1k01.p1k chr13 62 712 1778 1777 F 651 0.00 1174 reject_low 74 ALIGNMENT 0 YS2-1k01.p1k chr12 712 62 1076543 1076542 C 651 0.00 1174 reject_low 20 ALIGNMENT 0 YS2-1k01.p1k chr07 889 62 1089395 1089394 C 828 0.00 1174 reject_low 258 ALIGNMENT 0 YS2-1k01.p1k chr06 62 816 892 891 F 755 0.00 1174 reject_low 179 ALIGNMENT 0 YS2-1k01.p1k chr10 62 828 1680 1679 F 767 0.00 1174 reject_low 207 ALIGNMENT 48 YS2-1k01.p1k chr16 793 721 946087 946159 C 73 90.41 1174 reject_low 249 ALIGNMENT 112 YS2-1k01.p1k chr05 710 959 1506 1755 F 250 82.80 1174 reject_low 60 ALIGNMENT 0 YS2-1k01.p1k chr08 62 864 1662 1661 F 803 0.00 1174 reject_low 240 ALIGNMENT 0 YS2-1k01.p1k chr02 62 864 1497 1496 F 803 0.00 1174 reject_low 236 ALIGNMENT 0 YS2-1k01.p1k chr04 708 62 1530130 1530129 C 647 0.00 1174 reject_low 278 ALIGNMENT 0 YS2-1k01.p1k chr14 62 712 1685 1684 F 651 0.00 1174 reject_low 75 ALIGNMENT 0 YS2-1k01.p1k chr02 775 869 2414 2413 F 95 0.00 1174 reject_low 289 ALIGNMENT 0 YS2-1k01.p1k chr05 889 62 575318 575317 C 828 0.00 1174 reject_low 257 ALIGNMENT 87 YS2-1k01.p1k chr07 974 746 1089166 1089394 C 229 80.35 1174 reject_low 170 ALIGNMENT 50 YS2-1k01.p1k chr12 710 846 2079 2215 F 137 80.29 1174|0,9 reject_low 300 ALIGNMENT 0 YS2-1k01.p1k chr10 62 720 1932 1931 F 659 0.00 1174 reject_low 208 ALIGNMENT 0 YS2-1k01.p1k chr05 745 62 575318 575317 C 684 0.00 1174 reject_low 169 ALIGNMENT 0 YS2-1k01.q1k chr02 739 426 4213 4212 C 314 0.00 1319 reject_low 17 ALIGNMENT 49 YS2-1k01.p1k chr16 815 710 946101 946206 C 106 83.96 1174 reject_low 235 ALIGNMENT 44 YS2-1k01.p1k chr02 710 846 2278 2414 F 137 78.83 1174 reject_low 251 ALIGNMENT 37 YS2-1k01.p1k chr02 721 788 2325 2392 F 68 86.76 1174 reject_low 274 ALIGNMENT 0 YS2-1k01.p1k chr07 869 789 1088993 1088992 C 81 0.00 1174 reject_low 266 ALIGNMENT 0 YS2-1k01.p1k chr14 62 828 1585 1584 F 767 0.00 1174 reject_low 219 ALIGNMENT 41 YS2-1k01.p1k chr12 959 890 1069957 1070026 C 70 87.14 1174 reject_low 297 ALIGNMENT 88 YS2-1k01.p1k chr10 710 851 1957 2098 F 142 88.73 1174 reject_low 178 ALIGNMENT 185 YS2-1k01.p1k chr10 710 955 1777 2022 F 246 93.09 1174 reject_low 80 ALIGNMENT 20 YS2-1k01.p1k chr16 959 937 946461 946483 C 23 95.65 1174 reject_low 293 ALIGNMENT 33 YS2-1k01.p1k chr16 709 774 1842 1907 F 66 84.85 1174 reject_low 285 ALIGNMENT 0 YS2-1k01.p1k chr12 62 709 1791 1790 F 648 0.00 1174 reject_low 122 ALIGNMENT 33 YS2-1k01.p1k chr12 774 709 1069602 1069667 C 66 84.85 1174 reject_low 39 ALIGNMENT 0 YS2-1k01.p1k chr15 720 62 1089427 1089426 C 659 0.00 1174 reject_low 152 ALIGNMENT 70 YS2-1k01.p1k chr12 829 955 1694 1820 F 127 85.83 1174 reject_low 203 ALIGNMENT 87 YS2-1k01.p1k chr12 974 746 1069798 1070026 C 229 80.35 1174 reject_low 30 ALIGNMENT 41 YS2-1k01.p1k chr12 890 959 7326 7395 F 70 87.14 1174 reject_low 301 ALIGNMENT 43 YS2-1k01.p1k chr05 865 955 1481 1571 F 91 83.52 1174 reject_low 68 ALIGNMENT 812 YS2-1k01.p1k chr05 32 955 792 1715 F 924 96.32 1174 reject_low 10 ALIGNMENT 0 YS2-1k01.p1k chr14 775 869 1998 1997 F 95 0.00 1174 reject_low 283 ALIGNMENT 0 YS2-1k01.p1k chr05 709 62 575282 575281 C 648 0.00 1174 reject_low 102 ALIGNMENT 102 YS2-1k01.p1k chr08 746 974 1651 1879 F 229 82.53 1174 reject_low 159 ALIGNMENT 0 YS2-1k01.p1k chr10 62 709 1705 1704 F 648 0.00 1174 reject_low 125 ALIGNMENT 141 YS2-1k01.p1k chr12 710 970 7362 7622 F 261 85.82 1174 reject_low 104 ALIGNMENT 0 YS2-1k01.p1k chr13 775 869 2091 2090 F 95 0.00 1174 reject_low 282 ALIGNMENT 0 YS2-1k01.p1k chr14 62 709 1646 1645 F 648 0.00 1174 reject_low 114 ALIGNMENT 126 YS2-1k01.p1k chr16 970 710 946090 946350 C 261 83.91 1174 reject_low 136 ALIGNMENT 145 YS2-1k01.p1k chr02 710 974 1630 1894 F 265 86.04 1174 reject_low 98 ALIGNMENT 0 YS2-1k01.p1k chr07 864 62 1089384 1089383 C 803 0.00 1174 reject_low 239 ALIGNMENT 79 YS2-1k01.p1k chr14 782 955 1574 1747 F 174 82.76 1174 reject_low 196 ALIGNMENT 0 YS2-1k01.p1k chr08 828 62 560831 560830 C 767 0.00 1174 reject_low 217 ALIGNMENT 0 YS2-1k01.p1k chr12 712 62 1076579 1076578 C 651 0.00 1174 reject_low 23 ALIGNMENT 56 YS2-1k01.p1k chr09 865 970 1697 1802 F 106 84.91 1174 reject_low 210 ALIGNMENT 136 YS2-1k01.p1k chr12 974 710 1076353 1076617 C 265 84.91 1174 reject_low 27 ALIGNMENT 54 YS2-1k01.p1k chr10 710 789 2029 2108 F 80 91.25 1174 reject_low 212 ALIGNMENT 0 YS2-1k01.p1k chr12 785 786 1070023 1076289 C 0 0.00 1174 reject_low 295 ALIGNMENT 0 YS2-1k01.p1k chr16 936 62 946484 946483 C 875 0.00 1174 reject_low 293 ALIGNMENT 0 YS2-1k01.p1k chr08 62 781 1651 1650 F 720 0.00 1174 reject_low 131 ALIGNMENT 227 YS2-1k01.p1k chr04 1163 713 1529876 1530341 C 451 84.26 1174 reject_low 47 ALIGNMENT 0 YS2-1k01.p1k chr02 62 704 1769 1768 F 643 0.00 1174 reject_low 153 ALIGNMENT 0 YS2-1k01.p1k chr12 62 709 1719 1718 F 648 0.00 1174 reject_low 134 ALIGNMENT 0 YS2-1k01.p1k chr09 62 709 1794 1793 F 648 0.00 1174 reject_low 79 ALIGNMENT 0 YS2-1k01.p1k chr05 708 62 574959 574958 C 647 0.00 1174 reject_low 279 ALIGNMENT 0 YS2-1k01.p1k chr05 720 62 574983 574982 C 659 0.00 1174 reject_low 265 ALIGNMENT 0 YS2-1k01.p1k chr16 709 62 946387 946386 C 648 0.00 1174 reject_low 116 ALIGNMENT 74 YS2-1k01.p1k chr15 882 709 1089229 1089402 C 174 82.18 1174 reject_low 200 ALIGNMENT 814 YS2-1k01.p1k chr05 974 32 575053 575995 C 943 95.76 1174 ambiguous_tel 3 ALIGNMENT 233 YS2-1k01.p1k chr05 1163 713 574705 575170 C 451 84.70 1174 reject_low 40 ALIGNMENT 0 YS2-1k01.p1k chr14 62 712 1721 1720 F 651 0.00 1174 reject_low 43 ALIGNMENT 157 YS2-1k01.p1k chr02 713 974 1705 1966 F 262 87.79 1174 reject_low 88 ALIGNMENT 0 YS2-1k01.p1k chr12 62 720 7661 7660 F 659 0.00 1174 reject_low 267 ALIGNMENT 128 YS2-1k01.p1k chr04 918 721 1530064 1530261 C 198 89.39 1174 reject_low 151 ALIGNMENT 141 YS2-1k01.p1k chr05 970 710 575021 575281 C 261 85.82 1174 reject_low 102 ALIGNMENT 0 YS2-1k01.p1k chr05 781 62 575318 575317 C 720 0.00 1174 reject_low 190 ALIGNMENT 0 YS2-1k01.p1k chr10 62 704 1880 1879 F 643 0.00 1174 reject_low 99 ALIGNMENT 0 YS2-1k01.p1k chr12 709 62 1069739 1069738 C 648 0.00 1174 reject_low 36 ALIGNMENT 33 YS2-1k01.p1k chr14 709 774 1933 1998 F 66 84.85 1174 reject_low 283 ALIGNMENT 55 YS2-1k01.p1k chr02 829 955 1497 1623 F 127 81.89 1174 reject_low 213 ALIGNMENT 0 YS2-1k01.p1k chr09 776 795 2304 2311 F 20 0.00 1174 reject_low 303 ALIGNMENT 0 YS2-1k01.p1k chr09 62 889 1686 1685 F 828 0.00 1174 reject_low 287 ALIGNMENT 158 YS2-1k01.p1k chr05 710 976 1686 1952 F 267 87.64 1174 reject_low 54 ALIGNMENT 0 YS2-1k01.p1k chr08 869 775 560418 560417 C 95 0.00 1174 reject_low 290 ALIGNMENT 113 YS2-1k01.p1k chr16 970 746 946270 946494 C 225 84.44 1174 reject_low 156 ALIGNMENT 136 YS2-1k01.p1k chr04 974 710 1530152 1530416 C 265 84.91 1174 reject_low 121 ALIGNMENT 138 YS2-1k01.p1k chr10 710 970 1813 2073 F 261 85.44 1174 reject_low 120 ALIGNMENT 0 YS2-1k01.p1k chr08 62 708 1866 1865 F 647 0.00 1174 reject_low 286 ALIGNMENT 0 YS2-1k01.p1k chr10 62 709 1777 1776 F 648 0.00 1174 reject_low 80 ALIGNMENT 79 YS2-1k01.p1k chr08 955 782 560668 560841 C 174 82.76 1174 reject_low 192 ALIGNMENT 106 YS2-1k01.p1k chr10 746 955 1669 1878 F 210 84.76 1174 reject_low 162 ALIGNMENT 150 YS2-1k01.p1k chr02 710 970 1918 2178 F 261 86.97 1174 reject_low 93 ALIGNMENT 31 YS2-1k01.p1k chr10 890 955 1669 1734 F 66 83.33 1174 reject_low 288 ALIGNMENT 0 YS2-1k01.p1k chr09 62 709 2082 2081 F 648 0.00 1174 reject_low 163 ALIGNMENT 0 YS2-1k01.q1k chr08 739 426 3744 3743 C 314 0.00 1319 reject_low 11 ALIGNMENT 0 YS2-1k01.p1k chr06 62 709 1001 1000 F 648 0.00 1174 reject_low 53 ALIGNMENT 0 YS2-1k01.p1k chr05 62 828 1481 1480 F 767 0.00 1174 reject_low 62 ALIGNMENT 74 YS2-1k01.p1k chr04 882 709 1530064 1530237 C 174 82.18 1174 reject_low 199 ALIGNMENT 146 YS2-1k01.p1k chr02 721 918 2217 2414 F 198 92.42 1174 reject_low 117 ALIGNMENT 0 YS2-1k01.p1k chr13 847 869 2091 2090 F 23 0.00 1174 reject_low 232 ALIGNMENT 0 YS2-1k01.p1k chr08 709 62 560554 560553 C 648 0.00 1174 reject_low 252 ALIGNMENT 82 YS2-1k01.p1k chr06 817 974 892 1049 F 158 84.81 1174 reject_low 179 ALIGNMENT 0 YS2-1k01.p1k chr05 869 775 574894 574893 C 95 0.00 1174 reject_low 279 ALIGNMENT 0 YS2-1k01.p1k chr12 62 781 1683 1682 F 720 0.00 1174 reject_low 165 ALIGNMENT 196 YS2-1k01.p1k chr12 974 713 1076317 1076578 C 262 92.75 1174 reject_low 23 ALIGNMENT 0 YS2-1k01.p1k chr06 62 852 892 891 F 791 0.00 1174 reject_low 202 ALIGNMENT 199 YS2-1k01.p1k chr12 713 974 7437 7698 F 262 93.13 1174 reject_low 73 ALIGNMENT 43 YS2-1k01.p1k chr15 788 721 1089251 1089318 C 68 89.71 1174 reject_low 270 ALIGNMENT 49 YS2-1k01.p1k chr12 955 865 1076588 1076678 C 91 85.71 1174 reject_low 35 ALIGNMENT 0 YS2-1k01.p1k chr14 62 708 1933 1932 F 647 0.00 1174 reject_low 283 ALIGNMENT 91 YS2-1k01.p1k chr02 782 964 1486 1668 F 183 84.15 1174 reject_low 167 ALIGNMENT 0 YS2-1k01.p1k chr02 62 720 1821 1820 F 659 0.00 1174 reject_low 157 ALIGNMENT 0 YS2-1k01.p1k chr12 62 712 7437 7436 F 651 0.00 1174 reject_low 73 ALIGNMENT 0 YS2-1k01.p1k chr06 776 795 1187 1194 F 20 0.00 1174 reject_low 302 ALIGNMENT 0 YS2-1k01.p1k chr07 709 62 1089323 1089322 C 648 0.00 1174 reject_low 111 ALIGNMENT 97 YS2-1k01.p1k chr09 710 974 2082 2346 F 265 80.00 1174 reject_low 163 ALIGNMENT 0 YS2-1k01.p1k chr12 708 62 1069668 1069667 C 647 0.00 1174 reject_low 39 ALIGNMENT 0 YS2-1k01.p1k chr12 709 62 1069991 1069990 C 648 0.00 1174 reject_low 24 ALIGNMENT 50 YS2-1k01.p1k chr12 710 846 7614 7750 F 137 80.29 1174 reject_low 231 ALIGNMENT 0 YS2-1k01.p1k chr12 873 874 1070007 1076273 C 0 0.00 1174 reject_low 294 ALIGNMENT 0 YS2-1k01.p1k chr05 864 62 575307 575306 C 803 0.00 1174 reject_low 238 ALIGNMENT 0 YS2-1k01.p1k chr12 789 869 7728 7727 F 81 0.00 1174 reject_low 267 ALIGNMENT 0 YS2-1k01.p1k chr10 62 720 2004 2003 F 659 0.00 1174 reject_low 223 ALIGNMENT 20 YS2-1k01.p1k chr08 937 959 1662 1684 F 23 95.65 1174 reject_low 291 ALIGNMENT 121 YS2-1k01.p1k chr10 710 974 1741 2005 F 265 83.02 1174 reject_low 150 ALIGNMENT 227 YS2-1k01.p1k chr15 1163 713 1089041 1089506 C 451 84.26 1174 reject_low 48 ALIGNMENT 141 YS2-1k01.p1k chr16 710 970 1519 1779 F 261 85.82 1174 reject_low 108 ALIGNMENT 0 YS2-1k01.p1k chr12 775 869 7750 7749 F 95 0.00 1174 reject_low 281 ALIGNMENT 49 YS2-1k01.p1k chr14 865 955 1585 1675 F 91 85.71 1174 reject_low 243 ALIGNMENT 0 YS2-1k01.p1k chr05 708 62 575067 575066 C 647 0.00 1174 reject_low 183 ALIGNMENT 128 YS2-1k01.p1k chr12 918 721 1069602 1069799 C 198 89.39 1174 reject_low 28 ALIGNMENT 0 YS2-1k01.p1k chr08 709 62 560770 560769 C 648 0.00 1174 reject_low 90 ALIGNMENT 0 YS2-1k01.p1k chr06 62 781 893 892 F 720 0.00 1174 reject_low 86 ALIGNMENT 0 YS2-1k01.p1k chr06 62 720 976 975 F 659 0.00 1174 reject_low 177 ALIGNMENT 135 YS2-1k01.p1k chr02 721 974 2073 2326 F 254 85.43 1174 reject_low 126 ALIGNMENT 131 YS2-1k01.p1k chr12 721 918 7553 7750 F 198 89.90 1174 reject_low 142 ALIGNMENT 233 YS2-1k01.p1k chr13 713 1163 1814 2279 F 451 84.70 1174 reject_low 42 ALIGNMENT 50 YS2-1k01.p1k chr05 846 710 574893 575029 C 137 80.29 1174 reject_low 229 ALIGNMENT 146 YS2-1k01.p1k chr08 918 721 560417 560614 C 198 92.42 1174 reject_low 118 ALIGNMENT 919 YS2-1k01.q1k chr15 30 1168 1085869 1087000 F 1139 94.47 1319 ambiguous_tel 2 ALIGNMENT 0 YS2-1k01.p1k chr16 789 869 1885 1884 F 81 0.00 1174 reject_low 271 ALIGNMENT 123 YS2-1k01.p1k chr12 710 970 1827 2087 F 261 83.52 1174 reject_low 147 ALIGNMENT 0 YS2-1k01.p1k chr16 869 794 946088 946087 C 76 0.00 1174 reject_low 249 ALIGNMENT 0 YS2-1k01.p1k chr13 62 720 1894 1893 F 659 0.00 1174 reject_low 143 ALIGNMENT 0 YS2-1k01.p1k chr02 62 709 1630 1629 F 648 0.00 1174 reject_low 98 ALIGNMENT 0 YS2-1k01.p1k chr13 62 828 1678 1677 F 767 0.00 1174 reject_low 218 ALIGNMENT 79 YS2-1k01.p1k chr07 955 782 1089221 1089394 C 174 82.76 1174 reject_low 191 ALIGNMENT 0 YS2-1k01.p1k chr10 790 869 2108 2107 F 80 0.00 1174 reject_low 212 ALIGNMENT 55 YS2-1k01.p1k chr16 829 955 1494 1620 F 127 81.89 1174 reject_low 221 ALIGNMENT 0 YS2-1k01.p1k chr16 847 869 1907 1906 F 23 0.00 1174 reject_low 234 ALIGNMENT 50 YS2-1k01.p1k chr06 709 898 1072 1261 F 190 76.84 1174 reject_low 227 ALIGNMENT 0 YS2-1k01.p1k chr06 62 924 892 891 F 863 0.00 1174 reject_low 250 ALIGNMENT 0 YS2-1k01.p1k chr16 869 752 946094 946093 C 118 0.00 1174 reject_low 277 ALIGNMENT 0 YS2-1k01.p1k chr16 62 720 1818 1817 F 659 0.00 1174 reject_low 271 ALIGNMENT 0 YS2-1k01.p1k chr13 62 712 1814 1813 F 651 0.00 1174 reject_low 42 ALIGNMENT 0 YS2-1k01.p1k chr12 869 847 1069603 1069602 C 23 0.00 1174 reject_low 36 ALIGNMENT 814 YS2-1k01.p1k chr16 32 974 805 1747 F 943 95.76 1174 ambiguous_tel 4 ALIGNMENT 361 YS2-1k01.q1k chr12 425 30 9546 9943 C 396 97.47 1319 reject_low 13 ALIGNMENT 0 YS2-1k01.p1k chr10 62 781 1669 1668 F 720 0.00 1174 reject_low 194 ALIGNMENT 230 YS2-1k01.p1k chr12 713 1163 7473 7938 F 451 84.48 1174 reject_low 46 ALIGNMENT 55 YS2-1k01.p1k chr15 955 829 1089516 1089642 C 127 81.89 1174 reject_low 220 ALIGNMENT 0 YS2-1k01.p1k chr12 786 785 2191 7329 F 0 0.00 1174 reject_low 299 ALIGNMENT 0 YS2-1k01.p1k chr12 62 720 1874 1873 F 659 0.00 1174 reject_low 97 ALIGNMENT 0 YS2-1k01.p1k chr07 708 62 1089036 1089035 C 647 0.00 1174 reject_low 280 ALIGNMENT 55 YS2-1k01.p1k chr12 955 829 1069889 1070015 C 127 81.89 1174|0,9 reject_low 296 ALIGNMENT 0 YS2-1k01.p1k chr05 869 847 574894 574893 C 23 0.00 1174 reject_low 229 ALIGNMENT 158 YS2-1k01.p1k chr06 782 974 893 1085 F 193 94.82 1174 reject_low 86 ALIGNMENT 141 YS2-1k01.p1k chr12 970 710 1069730 1069990 C 261 85.82 1174 reject_low 24 ALIGNMENT 764 YS2-1k01.p1k chr02 32 955 808 1731 F 924 94.59 1174 reject_low 17 ALIGNMENT 0 YS2-1k01.p1k chr07 745 62 1089395 1089394 C 684 0.00 1174 reject_low 170 ALIGNMENT 0 YS2-1k01.p1k chr02 62 781 1486 1485 F 720 0.00 1174 reject_low 167 ALIGNMENT 0 YS2-1k01.p1k chr13 62 708 1918 1917 F 647 0.00 1174 reject_low 186 ALIGNMENT 89 YS2-1k01.p1k chr12 782 974 1683 1875 F 193 82.90 1174 reject_low 165 ALIGNMENT 0 YS2-1k01.p1k chr09 62 864 1697 1696 F 803 0.00 1174 reject_low 210 ALIGNMENT 0 YS2-1k01.p1k chr12 709 62 1076618 1076617 C 648 0.00 1174 reject_low 27 ALIGNMENT 143 YS2-1k01.p1k chr09 710 976 2046 2312 F 267 85.77 1174 reject_low 95 ALIGNMENT 0 YS2-1k01.p1k chr02 62 709 2026 2025 F 648 0.00 1174 reject_low 138 ALIGNMENT 82 YS2-1k01.p1k chr02 710 882 2242 2414 F 173 83.82 1174 reject_low 180 ALIGNMENT 0 YS2-1k01.p1k chr12 62 708 2150 2149 F 647 0.00 1174 reject_low 301 ALIGNMENT 131 YS2-1k01.p1k chr16 721 918 1710 1907 F 198 89.90 1174 reject_low 145 ALIGNMENT 157 YS2-1k01.p1k chr16 974 710 946158 946422 C 265 87.55 1174 reject_low 87 ALIGNMENT 20 YS2-1k01.p1k chr05 937 959 1481 1503 F 23 95.65 1174 reject_low 69 ALIGNMENT 878 YS2-1k01.q1k chr07 30 1129 1085610 1086703 F 1100 94.09 1319 ambiguous_tel 8 ALIGNMENT 0 YS2-1k01.p1k chr04 745 62 1530489 1530488 C 684 0.00 1174 reject_low 168 ALIGNMENT 0 YS2-1k01.p1k chr15 709 62 1089366 1089365 C 648 0.00 1174 reject_low 248 ALIGNMENT 68 YS2-1k01.q1k chr05 1045 911 4429 4558 C 135 86.67 1319 reject_low 10,21,52,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69 ALIGNMENT 0 YS2-1k01.p1k chr12 62 708 7577 7576 F 647 0.00 1174 reject_low 185 ALIGNMENT 131 YS2-1k01.p1k chr12 710 955 1719 1964 F 246 85.77 1174 reject_low 134 ALIGNMENT 0 YS2-1k01.p1k chr05 720 62 575091 575090 C 659 0.00 1174 reject_low 139 ALIGNMENT 128 YS2-1k01.p1k chr06 721 976 940 1195 F 256 84.38 1174 reject_low 129 ALIGNMENT 131 YS2-1k01.p1k chr07 918 721 1088970 1089167 C 198 89.90 1174 reject_low 140 ALIGNMENT 41 YS2-1k01.p1k chr16 890 959 1483 1552 F 70 87.14 1174 reject_low 263 ALIGNMENT 0 YS2-1k01.p1k chr12 62 712 1938 1937 F 651 0.00 1174 reject_low 45 ALIGNMENT 55 YS2-1k01.p1k chr14 829 955 1585 1711 F 127 81.89 1174 reject_low 219 ALIGNMENT 49 YS2-1k01.p1k chr08 955 865 560740 560830 C 91 85.71 1174 reject_low 241 ALIGNMENT 41 YS2-1k01.p1k chr04 959 890 1530419 1530488 C 70 87.14 1174 reject_low 256 ALIGNMENT 139 YS2-1k01.p1k chr05 974 710 574981 575245 C 265 85.28 1174 reject_low 110 ALIGNMENT 196 YS2-1k01.p1k chr15 974 713 1089281 1089542 C 262 92.75 1174 reject_low 78 ALIGNMENT 131 YS2-1k01.p1k chr12 721 918 2018 2215 F 198 89.90 1174 reject_low 141 ALIGNMENT 55 YS2-1k01.p1k chr10 721 815 2004 2098 F 95 87.37 1174 reject_low 223 ALIGNMENT 805 YS2-1k01.p1k chr10 32 974 991 1933 F 943 95.44 1174 ambiguous_tel 6 ALIGNMENT 0 YS2-1k01.p1k chr06 62 889 893 892 F 828 0.00 1174 reject_low 209 ALIGNMENT 808 YS2-1k01.p1k chr12 32 974 6648 7590 F 943 95.55 1174 reject_low 13 ALIGNMENT 206 YS2-1k01.p1k chr09 710 1163 2118 2574 F 454 82.38 1174 reject_low 51 ALIGNMENT 0 YS2-1k01.p1k chr09 62 720 1949 1948 F 659 0.00 1174 reject_low 127 ALIGNMENT 0 YS2-1k01.p1k chr05 712 62 575171 575170 C 651 0.00 1174 reject_low 40 ALIGNMENT 0 YS2-1k01.p1k chr10 62 709 2065 2064 F 648 0.00 1174 reject_low 273 ALIGNMENT 135 YS2-1k01.p1k chr10 710 970 1705 1965 F 261 85.06 1174 reject_low 125 ALIGNMENT 0 YS2-1k01.p1k chr16 62 864 1494 1493 F 803 0.00 1174 reject_low 245 ALIGNMENT 33 YS2-1k01.p1k chr04 774 709 1530064 1530129 C 66 84.85 1174 reject_low 278 ALIGNMENT 0 YS2-1k01.p1k chr08 62 720 1842 1841 F 659 0.00 1174 reject_low 272 ALIGNMENT 31 YS2-1k01.p1k chr16 751 709 946093 946135 C 43 93.02 1174 reject_low 277 ALIGNMENT 0 YS2-1k01.p1k chr07 709 62 1089359 1089358 C 648 0.00 1174 reject_low 103 ALIGNMENT 358 YS2-1k01.q1k chr02 425 30 4212 4609 C 396 97.22 1319 reject_low 17 ALIGNMENT 69 YS2-1k01.p1k chr08 710 888 1759 1937 F 179 81.01 1174 reject_low 205 ALIGNMENT 114 YS2-1k01.p1k chr08 782 978 1651 1847 F 197 86.80 1174 reject_low 131 ALIGNMENT 141 YS2-1k01.p1k chr04 970 710 1530192 1530452 C 261 85.82 1174 reject_low 101 ALIGNMENT 33 YS2-1k01.p1k chr15 774 709 1089229 1089294 C 66 84.85 1174 reject_low 284 ALIGNMENT 55 YS2-1k01.p1k chr07 955 829 1089257 1089383 C 127 81.89 1174 reject_low 216 ALIGNMENT 55 YS2-1k01.p1k chr12 955 829 1076552 1076678 C 127 81.89 1174 reject_low 34 ALIGNMENT 0 YS2-1k01.p1k chr16 709 62 946351 946350 C 648 0.00 1174 reject_low 136 ALIGNMENT 0 YS2-1k01.p1k chr07 828 62 1089384 1089383 C 767 0.00 1174 reject_low 216 ALIGNMENT 41 YS2-1k01.p1k chr08 959 890 560772 560841 C 70 87.14 1174 reject_low 259 ALIGNMENT 20 YS2-1k01.p1k chr12 937 959 1694 1716 F 23 95.65 1174 reject_low 292 ALIGNMENT 814 YS2-1k01.p1k chr04 974 32 1530224 1531166 C 943 95.76 1174 ambiguous_tel 0 ALIGNMENT 0 YS2-1k01.p1k chr07 712 62 1089248 1089247 C 651 0.00 1174 reject_low 41 ALIGNMENT 230 YS2-1k01.p1k chr12 713 1163 1938 2403 F 451 84.48 1174 reject_low 45 ALIGNMENT 0 YS2-1k01.p1k chr06 62 720 1048 1047 F 659 0.00 1174 reject_low 226 ALIGNMENT 0 YS2-1k01.p1k chr02 62 828 1497 1496 F 767 0.00 1174 reject_low 213 ALIGNMENT 0 YS2-1k01.p1k chr10 62 709 1957 1956 F 648 0.00 1174 reject_low 178 ALIGNMENT 43 YS2-1k01.p1k chr12 721 788 7661 7728 F 68 89.71 1174 reject_low 267 ALIGNMENT 0 YS2-1k01.p1k chr13 62 745 1667 1666 F 684 0.00 1174 reject_low 173 ALIGNMENT 0 YS2-1k01.p1k chr12 62 720 2126 2125 F 659 0.00 1174 reject_low 299 ALIGNMENT 0 YS2-1k01.p1k chr14 62 709 1610 1609 F 648 0.00 1174 reject_low 106 ALIGNMENT 43 YS2-1k01.p1k chr05 890 955 1470 1535 F 66 89.39 1174 reject_low 67 ALIGNMENT 87 YS2-1k01.p1k chr13 746 974 1667 1895 F 229 80.35 1174 reject_low 173 ALIGNMENT 0 YS2-1k01.p1k chr15 889 62 1089654 1089653 C 828 0.00 1174 reject_low 262 ALIGNMENT 139 YS2-1k01.p1k chr16 974 710 946122 946386 C 265 85.28 1174 reject_low 116 ALIGNMENT 0 YS2-1k01.p1k chr05 62 709 1830 1829 F 648 0.00 1174 reject_low 64 ALIGNMENT 107 YS2-1k01.p1k chr05 710 976 1722 1988 F 267 81.27 1174 reject_low 59 ALIGNMENT 131 YS2-1k01.p1k chr05 918 721 574893 575090 C 198 89.90 1174 reject_low 139 ALIGNMENT 0 YS2-1k01.p1k chr16 775 869 1907 1906 F 95 0.00 1174 reject_low 285 ALIGNMENT 79 YS2-1k01.p1k chr04 955 782 1530315 1530488 C 174 82.76 1174 reject_low 189 ALIGNMENT 0 YS2-1k01.p1k chr14 62 864 1585 1584 F 803 0.00 1174 reject_low 243 ALIGNMENT 0 YS2-1k01.p1k chr02 62 709 2098 2097 F 648 0.00 1174 reject_low 82 ALIGNMENT 87 YS2-1k01.p1k chr12 746 974 7326 7554 F 229 80.35 1174 reject_low 172 ALIGNMENT 0 YS2-1k01.p1k chr08 62 745 1651 1650 F 684 0.00 1174 reject_low 159 ALIGNMENT 77 YS2-1k01.p1k chr14 709 882 1825 1998 F 174 82.76 1174 reject_low 187 ALIGNMENT 79 YS2-1k01.p1k chr12 955 782 1069853 1070026 C 174 82.76 1174|0,4 reject_low 295 ALIGNMENT 167 YS2-1k01.p1k chr02 710 976 1738 2004 F 267 88.76 1174 reject_low 81 ALIGNMENT 64 YS2-1k01.p1k chr09 829 970 1697 1838 F 142 82.39 1174 reject_low 206 ALIGNMENT 0 YS2-1k01.p1k chr12 62 745 7326 7325 F 684 0.00 1174 reject_low 172 ALIGNMENT 0 YS2-1k01.p1k chr16 869 852 946102 946101 C 18 0.00 1174 reject_low 201 ALIGNMENT 33 YS2-1k01.p1k chr12 709 774 7685 7750 F 66 84.85 1174 reject_low 281 ALIGNMENT 227 YS2-1k01.p1k chr12 1163 713 1069414 1069879 C 451 84.26 1174 reject_low 19 ALIGNMENT 0 YS2-1k01.p1k chr16 745 62 946495 946494 C 684 0.00 1174 reject_low 156 ALIGNMENT 79 YS2-1k01.p1k chr13 782 955 1667 1840 F 174 82.76 1174 reject_low 195 ALIGNMENT 0 YS2-1k01.p1k chr07 720 62 1089168 1089167 C 659 0.00 1174 reject_low 140 ALIGNMENT 49 YS2-1k01.p1k chr04 955 865 1530387 1530477 C 91 85.71 1174 reject_low 237 ALIGNMENT 139 YS2-1k01.p1k chr02 710 974 1558 1822 F 265 85.28 1174 reject_low 109 ALIGNMENT 185 YS2-1k01.p1k chr09 710 955 1794 2039 F 246 93.09 1174 reject_low 79 ALIGNMENT 0 YS2-1k01.p1k chr12 62 889 1683 1682 F 828 0.00 1174 reject_low 253 ALIGNMENT 87 YS2-1k01.p1k chr14 746 974 1574 1802 F 229 80.35 1174 reject_low 174 ALIGNMENT 0 YS2-1k01.p1k chr16 712 62 946240 946239 C 651 0.00 1174 reject_low 201 ALIGNMENT 811 YS2-1k01.p1k chr13 32 974 989 1931 F 943 95.65 1174 reject_low 12 ALIGNMENT 49 YS2-1k01.p1k chr15 955 865 1089552 1089642 C 91 85.71 1174 reject_low 244 ALIGNMENT 0 YS2-1k01.p1k chr05 62 720 1877 1876 F 659 0.00 1174 reject_low 65 ALIGNMENT 0 YS2-1k01.p1k chr16 781 62 946495 946494 C 720 0.00 1174 reject_low 166 ALIGNMENT 0 YS2-1k01.p1k chr12 720 62 1069692 1069691 C 659 0.00 1174 reject_low 38 ALIGNMENT 0 YS2-1k01.p1k chr08 889 62 560842 560841 C 828 0.00 1174 reject_low 259 ALIGNMENT 0 YS2-1k01.p1k chr12 62 709 1755 1754 F 648 0.00 1174 reject_low 89 ALIGNMENT 87 YS2-1k01.p1k chr05 974 746 575089 575317 C 229 80.35 1174 reject_low 169 ALIGNMENT 87 YS2-1k01.p1k chr08 974 746 560613 560841 C 229 80.35 1174 reject_low 171 ALIGNMENT 0 YS2-1k01.p1k chr02 62 708 1881 1880 F 647 0.00 1174 reject_low 164 ALIGNMENT 0 YS2-1k01.p1k chr14 62 720 1909 1908 F 659 0.00 1174 reject_low 269 ALIGNMENT 111 YS2-1k01.p1k chr12 746 959 1683 1896 F 214 85.05 1174 reject_low 158 ALIGNMENT 87 YS2-1k01.p1k chr16 746 974 1483 1711 F 229 80.35 1174 reject_low 176 ALIGNMENT 0 YS2-1k01.p1k chr09 62 709 1866 1865 F 648 0.00 1174 reject_low 130 ALIGNMENT 0 YS2-1k01.p1k chr13 62 709 1739 1738 F 648 0.00 1174 reject_low 113 ALIGNMENT 64 YS2-1k01.p1k chr10 829 970 1680 1821 F 142 82.39 1174 reject_low 207 ALIGNMENT 0 YS2-1k01.p1k chr02 62 720 2325 2324 F 659 0.00 1174 reject_low 274 ALIGNMENT 0 YS2-1k01.p1k chr13 62 720 2002 2001 F 659 0.00 1174 reject_low 268 ALIGNMENT 43 YS2-1k01.p1k chr04 788 721 1530086 1530153 C 68 89.71 1174 reject_low 264 ALIGNMENT 0 YS2-1k01.p1k chr08 62 720 1806 1805 F 659 0.00 1174 reject_low 276 ALIGNMENT 158 YS2-1k01.p1k chr02 721 976 1677 1932 F 256 88.28 1174 reject_low 85 ALIGNMENT 0 YS2-1k01.p1k chr13 62 889 1667 1666 F 828 0.00 1174 reject_low 260 ALIGNMENT 37 YS2-1k01.p1k chr06 925 974 892 941 F 50 92.00 1174 reject_low 250 ALIGNMENT 196 YS2-1k01.p1k chr12 974 713 1069654 1069915 C 262 92.75 1174 reject_low 22 ALIGNMENT 34 YS2-1k01.p1k chr06 796 866 1195 1265 F 71 83.10 1174 reject_low 302 ALIGNMENT 64 YS2-1k01.p1k chr05 710 938 1830 2058 F 229 77.29 1174 reject_low 64 ALIGNMENT 0 YS2-1k01.p1k chr15 869 775 1089230 1089229 C 95 0.00 1174 reject_low 284 ALIGNMENT 0 YS2-1k01.p1k chr08 816 869 1900 1899 F 54 0.00 1174 reject_low 276 ALIGNMENT 0 YS2-1k01.p1k chr10 752 869 2106 2105 F 118 0.00 1174 reject_low 273 ALIGNMENT 0 YS2-1k01.p1k chr12 708 62 1069776 1069775 C 647 0.00 1174 reject_low 33 ALIGNMENT 0 YS2-1k01.p1k chr16 62 709 1519 1518 F 648 0.00 1174 reject_low 108 ALIGNMENT 106 YS2-1k01.p1k chr02 746 955 1486 1695 F 210 84.76 1174 reject_low 160 ALIGNMENT 0 YS2-1k01.p1k chr16 62 889 1483 1482 F 828 0.00 1174 reject_low 263 ALIGNMENT 0 YS2-1k01.p1k chr05 62 709 1722 1721 F 648 0.00 1174 reject_low 59 ALIGNMENT 0 YS2-1k01.p1k chr02 62 709 1522 1521 F 648 0.00 1174 reject_low 92 ALIGNMENT 0 YS2-1k01.p1k chr16 869 816 946102 946101 C 54 0.00 1174 reject_low 235 ALIGNMENT 0 YS2-1k01.p1k chr12 869 775 1069603 1069602 C 95 0.00 1174 reject_low 39 ALIGNMENT 0 YS2-1k01.p1k chr09 62 710 2239 2238 F 649 0.00 1174 reject_low 303 ALIGNMENT 0 YS2-1k01.p1k chr04 709 62 1530417 1530416 C 648 0.00 1174 reject_low 121 ALIGNMENT 155 YS2-1k01.p1k chr02 710 955 1522 1767 F 246 89.02 1174 reject_low 92 ALIGNMENT 31 YS2-1k01.p1k chr08 774 721 560417 560470 C 54 87.04 1174 reject_low 290 ALIGNMENT 361 YS2-1k01.q1k chr13 425 30 3887 4284 C 396 97.47 1319 reject_low 12 ALIGNMENT 0 YS2-1k01.p1k chr16 709 62 946423 946422 C 648 0.00 1174 reject_low 87 ALIGNMENT 0 YS2-1k01.p1k chr09 62 720 2021 2020 F 659 0.00 1174 reject_low 148 ALIGNMENT 0 YS2-1k01.p1k chr07 708 62 1089144 1089143 C 647 0.00 1174 reject_low 184 ALIGNMENT 0 YS2-1k01.p1k chr08 712 62 560695 560694 C 651 0.00 1174 reject_low 50 ALIGNMENT 139 YS2-1k01.p1k chr16 710 974 1555 1819 F 265 85.28 1174 reject_low 115 ALIGNMENT 77 YS2-1k01.p1k chr07 882 709 1088970 1089143 C 174 82.76 1174 reject_low 184 ALIGNMENT 0 YS2-1k01.p1k chr04 720 62 1530154 1530153 C 659 0.00 1174 reject_low 264 ALIGNMENT 0 YS2-1k01.p1k chr05 62 709 1758 1757 F 648 0.00 1174 reject_low 56 ALIGNMENT 0 YS2-1k01.p1k chr08 720 62 560471 560470 C 659 0.00 1174 reject_low 290 ALIGNMENT 0 YS2-1k01.p1k chr04 781 62 1530489 1530488 C 720 0.00 1174 reject_low 189 ALIGNMENT 56 YS2-1k01.p1k chr06 890 974 893 977 F 85 89.41 1174 reject_low 209 ALIGNMENT 0 YS2-1k01.p1k chr02 62 720 1677 1676 F 659 0.00 1174 reject_low 85 ALIGNMENT 0 YS2-1k01.p1k chr13 62 709 1703 1702 F 648 0.00 1174 reject_low 105 ALIGNMENT 233 YS2-1k01.p1k chr14 713 1163 1721 2186 F 451 84.70 1174 reject_low 43 ALIGNMENT 0 YS2-1k01.p1k chr09 62 709 1974 1973 F 648 0.00 1174 reject_low 91 ALIGNMENT 139 YS2-1k01.p1k chr12 710 974 7398 7662 F 265 85.28 1174 reject_low 112 ALIGNMENT 0 YS2-1k01.p1k chr04 712 62 1530342 1530341 C 651 0.00 1174 reject_low 47 ALIGNMENT 0 YS2-1k01.p1k chr12 889 62 1076690 1076689 C 828 0.00 1174 reject_low 37 ALIGNMENT 0 YS2-1k01.p1k chr10 62 709 1849 1848 F 648 0.00 1174 reject_low 133 ALIGNMENT 147 YS2-1k01.p1k chr02 710 970 1990 2250 F 261 86.59 1174 reject_low 96 ALIGNMENT 0 YS2-1k01.p1k chr12 712 62 1069880 1069879 C 651 0.00 1174 reject_low 19 ALIGNMENT 126 YS2-1k01.p1k chr05 710 970 1578 1838 F 261 83.91 1174 reject_low 57 ALIGNMENT 132 YS2-1k01.p1k chr09 710 970 1866 2126 F 261 84.67 1174 reject_low 130 ALIGNMENT 808 YS2-1k01.p1k chr14 32 974 896 1838 F 943 95.55 1174 ambiguous_tel 7 ALIGNMENT 0 YS2-1k01.p1k chr08 789 869 1909 1908 F 81 0.00 1174 reject_low 272 ALIGNMENT 150 YS2-1k01.p1k chr09 705 974 1897 2166 F 270 86.30 1174 reject_low 84 ALIGNMENT 0 YS2-1k01.p1k chr12 720 62 1069800 1069799 C 659 0.00 1174 reject_low 28 ALIGNMENT 141 YS2-1k01.p1k chr07 970 710 1089098 1089358 C 261 85.82 1174 reject_low 103 ALIGNMENT 50 YS2-1k01.p1k chr16 710 846 1771 1907 F 137 80.29 1174 reject_low 234 ALIGNMENT 136 YS2-1k01.p1k chr15 974 710 1089317 1089581 C 265 84.91 1174 reject_low 123 ALIGNMENT 0 YS2-1k01.p1k chr08 709 62 560590 560589 C 648 0.00 1174 reject_low 181 ALIGNMENT 74 YS2-1k01.p1k chr12 882 709 1069602 1069775 C 174 82.18 1174 reject_low 33 ALIGNMENT 178 YS2-1k01.p1k chr05 710 974 1650 1914 F 265 90.19 1174 reject_low 52 ALIGNMENT 0 YS2-1k01.q1k chr13 739 426 3888 3887 C 314 0.00 1319 reject_low 12 ALIGNMENT 33 YS2-1k01.p1k chr05 774 709 574893 574958 C 66 84.85 1174 reject_low 279 ALIGNMENT 0 YS2-1k01.p1k chr09 62 720 2165 2164 F 659 0.00 1174 reject_low 246 ALIGNMENT 119 YS2-1k01.p1k chr06 746 976 893 1123 F 231 84.85 1174 reject_low 146 ALIGNMENT 358 YS2-1k01.q1k chr08 30 425 558222 558619 F 396 97.22 1319 reject_low 14 ALIGNMENT 56 YS2-1k01.p1k chr10 865 970 1680 1785 F 106 84.91 1174 reject_low 211 ALIGNMENT 0 YS2-1k01.p1k chr08 869 847 560418 560417 C 23 0.00 1174 reject_low 252 ALIGNMENT 82 YS2-1k01.p1k chr08 882 710 560417 560589 C 173 83.82 1174 reject_low 181 ALIGNMENT 79 YS2-1k01.p1k chr12 782 955 7326 7499 F 174 82.76 1174|4,0 reject_low 299 ALIGNMENT 0 YS2-1k01.p1k chr15 745 62 1089654 1089653 C 684 0.00 1174 reject_low 175 ALIGNMENT 0 YS2-1k01.p1k chr02 62 720 2361 2360 F 659 0.00 1174 reject_low 289 ALIGNMENT 196 YS2-1k01.p1k chr04 974 713 1530116 1530377 C 262 92.75 1174 reject_low 77 ALIGNMENT 0 YS2-1k01.p1k chr05 62 936 1481 1480 F 875 0.00 1174 reject_low 69 ALIGNMENT 50 YS2-1k01.p1k chr14 710 846 1862 1998 F 137 80.29 1174 reject_low 233 ALIGNMENT 0 YS2-1k01.p1k chr12 62 936 1694 1693 F 875 0.00 1174 reject_low 292 ALIGNMENT 119 YS2-1k01.p1k chr08 710 896 1723 1909 F 187 89.30 1174 reject_low 154 ALIGNMENT 141 YS2-1k01.p1k chr14 710 970 1610 1870 F 261 85.82 1174 reject_low 106 ALIGNMENT 0 YS2-1k01.p1k chr09 62 704 1897 1896 F 643 0.00 1174 reject_low 84 ALIGNMENT 0 YS2-1k01.p1k chr12 847 869 7750 7749 F 23 0.00 1174 reject_low 231 ALIGNMENT 130 YS2-1k01.p1k chr10 705 923 1880 2098 F 219 87.67 1174 reject_low 99 ALIGNMENT 106 YS2-1k01.p1k chr09 746 955 1686 1895 F 210 84.76 1174 reject_low 161 ALIGNMENT 0 YS2-1k01.p1k chr15 712 62 1089543 1089542 C 651 0.00 1174 reject_low 78 ALIGNMENT 0 YS2-1k01.p1k chr13 62 709 1955 1954 F 648 0.00 1174 reject_low 232 ALIGNMENT 47 YS2-1k01.p1k chr15 846 710 1089229 1089365 C 137 79.56 1174 reject_low 248 ALIGNMENT 0 YS2-1k01.p1k chr07 869 847 1088971 1088970 C 23 0.00 1174 reject_low 230 ALIGNMENT 131 YS2-1k01.p1k chr14 721 918 1801 1998 F 198 89.90 1174 reject_low 144 ALIGNMENT 145 YS2-1k01.p1k chr05 710 974 1758 2022 F 265 86.04 1174 reject_low 56 ALIGNMENT 0 YS2-1k01.p1k chr05 869 789 574916 574915 C 81 0.00 1174 reject_low 265 ALIGNMENT 0 YS2-1k01.p1k chr16 62 709 1771 1770 F 648 0.00 1174 reject_low 234 ALIGNMENT 23 YS2-1k01.p1k chr09 711 775 2239 2303 F 65 80.00 1174 reject_low 303 ALIGNMENT 50 YS2-1k01.p1k chr13 710 846 1955 2091 F 137 80.29 1174 reject_low 232 ALIGNMENT 0 YS2-1k01.p1k chr06 62 710 1122 1121 F 649 0.00 1174 reject_low 302 ALIGNMENT 0 YS2-1k01.p1k chr15 781 62 1089654 1089653 C 720 0.00 1174 reject_low 197 ALIGNMENT 133 YS2-1k01.p1k chr16 923 721 946101 946303 C 203 89.66 1174 reject_low 135 ALIGNMENT 0 YS2-1k01.p1k chr02 62 709 2278 2277 F 648 0.00 1174 reject_low 251 ALIGNMENT 805 YS2-1k01.p1k chr09 32 974 1008 1950 F 943 95.44 1174 ambiguous_tel 5 ALIGNMENT 0 YS2-1k01.p1k chr12 775 889 2216 7325 F 115 0.00 1174 reject_low 301 ALIGNMENT 0 YS2-1k01.p1k chr12 62 720 2018 2017 F 659 0.00 1174 reject_low 141 ALIGNMENT 0 YS2-1k01.p1k chr05 62 708 1901 1900 F 647 0.00 1174 reject_low 66 ALIGNMENT 199 YS2-1k01.p1k chr13 713 974 1778 2039 F 262 93.13 1174 reject_low 74 ALIGNMENT 49 YS2-1k01.p1k chr07 955 865 1089293 1089383 C 91 85.71 1174 reject_low 239 ALIGNMENT 0 YS2-1k01.p1k chr08 864 62 560831 560830 C 803 0.00 1174 reject_low 241 ALIGNMENT 146 YS2-1k01.p1k chr09 710 976 1974 2240 F 267 86.14 1174 reject_low 91 ALIGNMENT 0 YS2-1k01.p1k chr08 720 62 560507 560506 C 659 0.00 1174 reject_low 275 ALIGNMENT 0 YS2-1k01.p1k chr09 62 708 2189 2188 F 647 0.00 1174 reject_low 228 ALIGNMENT 0 YS2-1k01.p1k chr16 708 62 946136 946135 C 647 0.00 1174 reject_low 277 ALIGNMENT 0 YS2-1k01.q1k chr08 426 739 558619 558618 F 314 0.00 1319 reject_low 14 ALIGNMENT 97 YS2-1k01.q1k chr12 911 1168 1067125 1067373 F 258 82.17 1319 reject_low 9,19,20,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,294,295,296,297 ALIGNMENT 40 YS2-1k01.p1k chr08 721 788 1842 1909 F 68 88.24 1174 reject_low 272 ALIGNMENT 151 YS2-1k01.p1k chr05 710 974 1542 1806 F 265 86.79 1174 reject_low 55 ALIGNMENT 803 YS2-1k01.p1k chr08 970 32 560581 561519 C 939 95.53 1174 reject_low 14 ALIGNMENT 206 YS2-1k01.p1k chr08 1163 713 560229 560694 C 451 82.71 1174 reject_low 50 ALIGNMENT 0 YS2-1k01.p1k chr12 62 709 2079 2078 F 648 0.00 1174 reject_low 300 ALIGNMENT 0 YS2-1k01.p1k chr07 709 62 1089107 1089106 C 648 0.00 1174 reject_low 230 ALIGNMENT 0 YS2-1k01.p1k chr16 62 712 1594 1593 F 651 0.00 1174 reject_low 76 ALIGNMENT 0 YS2-1k01.p1k chr09 62 709 1830 1829 F 648 0.00 1174 reject_low 119 ALIGNMENT 49 YS2-1k01.p1k chr12 955 865 1069925 1070015 C 91 85.71 1174|0,9 reject_low 294 ALIGNMENT 0 YS2-1k01.p1k chr08 62 709 1723 1722 F 648 0.00 1174 reject_low 154 ALIGNMENT 169 YS2-1k01.p1k chr08 974 713 560469 560730 C 262 89.31 1174 reject_low 83 ALIGNMENT 814 YS2-1k01.p1k chr12 974 32 1069762 1070704 C 943 95.76 1174 reject_low 9 ALIGNMENT 0 YS2-1k01.p1k chr06 62 745 893 892 F 684 0.00 1174 reject_low 146 ALIGNMENT 0 YS2-1k01.p1k chr02 62 720 2217 2216 F 659 0.00 1174 reject_low 117 ALIGNMENT 74 YS2-1k01.p1k chr12 882 709 1076265 1076438 C 174 82.18 1174|9,0 reject_low 294 ALIGNMENT 0 YS2-1k01.p1k chr06 62 720 940 939 F 659 0.00 1174 reject_low 129 ALIGNMENT 0 YS2-1k01.p1k chr16 62 709 1555 1554 F 648 0.00 1174 reject_low 115 ALIGNMENT 0 YS2-1k01.p1k chr16 62 708 1842 1841 F 647 0.00 1174 reject_low 285 ALIGNMENT 49 YS2-1k01.p1k chr05 955 865 575216 575306 C 91 85.71 1174 reject_low 238 ALIGNMENT 0 YS2-1k01.p1k chr02 62 708 1845 1844 F 647 0.00 1174 reject_low 94 ALIGNMENT 361 YS2-1k01.q1k chr12 425 30 4011 4408 C 396 97.47 1319 reject_low 16 ALIGNMENT 202 YS2-1k01.p1k chr12 713 974 1902 2163 F 262 93.51 1174 reject_low 70 ALIGNMENT 43 YS2-1k01.p1k chr12 788 721 1076287 1076354 C 68 89.71 1174|3,0 reject_low 295 ALIGNMENT 0 YS2-1k01.p1k chr16 720 62 946160 946159 C 659 0.00 1174 reject_low 249 ALIGNMENT 79 YS2-1k01.p1k chr16 782 955 1483 1656 F 174 82.76 1174 reject_low 198 ALIGNMENT 360 YS2-1k01.q1k chr16 30 425 943768 944166 F 396 97.47 1319 reject_low 15 ALIGNMENT 131 YS2-1k01.p1k chr02 709 974 1953 2218 F 266 84.21 1174 reject_low 128 ALIGNMENT 0 YS2-1k01.p1k chr12 838 837 2207 7345 F 0 0.00 1174 reject_low 300 ALIGNMENT 0 YS2-1k01.p1k chr02 62 709 1558 1557 F 648 0.00 1174 reject_low 109 ALIGNMENT 154 YS2-1k01.p1k chr12 710 974 1755 2019 F 265 87.17 1174 reject_low 89 ALIGNMENT 0 YS2-1k01.p1k chr05 712 62 575207 575206 C 651 0.00 1174 reject_low 71 ALIGNMENT 49 YS2-1k01.p1k chr02 865 955 1497 1587 F 91 85.71 1174 reject_low 236 ALIGNMENT 0 YS2-1k01.p1k chr12 828 62 1076679 1076678 C 767 0.00 1174 reject_low 34 ALIGNMENT 50 YS2-1k01.p1k chr09 709 898 2189 2378 F 190 76.84 1174 reject_low 228 ALIGNMENT 0 YS2-1k01.p1k chr08 62 709 1759 1758 F 648 0.00 1174 reject_low 205 ALIGNMENT 43 YS2-1k01.p1k chr05 788 721 574915 574982 C 68 89.71 1174 reject_low 265 ALIGNMENT 0 YS2-1k01.p1k chr14 62 745 1574 1573 F 684 0.00 1174 reject_low 174 ALIGNMENT 0 YS2-1k01.p1k chr05 709 62 575246 575245 C 648 0.00 1174 reject_low 110 ALIGNMENT 361 YS2-1k01.q1k chr08 425 30 3743 4140 C 396 97.47 1319 reject_low 11 ALIGNMENT 227 YS2-1k01.p1k chr12 1163 713 1076077 1076542 C 451 84.26 1174 reject_low 20 ALIGNMENT 87 YS2-1k01.p1k chr12 974 746 1076461 1076689 C 229 80.35 1174 reject_low 31 ALIGNMENT 52 YS2-1k01.p1k chr06 721 938 1048 1265 F 218 75.69 1174 reject_low 226 ALIGNMENT 0 YS2-1k01.p1k chr05 62 745 1470 1469 F 684 0.00 1174 reject_low 61 ALIGNMENT 0 YS2-1k01.p1k chr10 852 869 2098 2097 F 18 0.00 1174 reject_low 178 ALIGNMENT 0 YS2-1k01.p1k chr12 62 708 7685 7684 F 647 0.00 1174 reject_low 281 ALIGNMENT 87 YS2-1k01.p1k chr06 721 974 976 1229 F 254 79.13 1174 reject_low 177 ALIGNMENT 199 YS2-1k01.p1k chr16 713 974 1594 1855 F 262 93.13 1174 reject_low 76 ALIGNMENT 0 YS2-1k01.p1k chr15 709 62 1089618 1089617 C 648 0.00 1174 reject_low 107 ALIGNMENT 919 YS2-1k01.q1k chr12 30 1168 1072905 1074036 F 1139 94.47 1319 ambiguous_tel 1 ALIGNMENT 0 YS2-1k01.p1k chr16 62 745 1483 1482 F 684 0.00 1174 reject_low 176 ALIGNMENT 0 YS2-1k01.p1k chr12 864 62 1076679 1076678 C 803 0.00 1174 reject_low 35 ALIGNMENT 0 YS2-1k01.p1k chr08 62 828 1662 1661 F 767 0.00 1174 reject_low 182 ALIGNMENT 107 YS2-1k01.p1k chr02 705 955 1769 2019 F 251 82.07 1174 reject_low 153 ALIGNMENT 0 YS2-1k01.p1k chr02 62 745 1486 1485 F 684 0.00 1174 reject_low 160 ALIGNMENT 0 YS2-1k01.p1k chr12 709 62 1076402 1076401 C 648 0.00 1174 reject_low 296 ALIGNMENT 0 YS2-1k01.p1k chr16 62 708 1734 1733 F 647 0.00 1174 reject_low 188 ALIGNMENT 888 YS2-1k01.q1k chr16 1168 30 4136 5267 C 1139 93.59 1319 ambiguous_tel 4 ALIGNMENT 0 YS2-1k01.p1k chr04 828 62 1530478 1530477 C 767 0.00 1174 reject_low 214 ALIGNMENT 0 YS2-1k01.p1k chr12 837 838 1070007 1076273 C 0 0.00 1174 reject_low 296 ALIGNMENT 814 YS2-1k01.p1k chr12 974 32 1076425 1077367 C 943 95.76 1174 ambiguous_tel 1 ALIGNMENT 47 YS2-1k01.p1k chr12 846 710 1076265 1076401 C 137 79.56 1174|9,0 reject_low 296 ALIGNMENT 73 YS2-1k01.p1k chr05 829 955 1481 1607 F 127 86.61 1174 reject_low 62 ALIGNMENT 0 YS2-1k01.p1k chr14 62 781 1574 1573 F 720 0.00 1174 reject_low 196 ALIGNMENT 755 YS2-1k01.p1k chr06 32 976 215 1159 F 945 93.65 1174 reject_low 18 ALIGNMENT 0 YS2-1k01.p1k chr12 708 62 1076439 1076438 C 647 0.00 1174 reject_low 294 ALIGNMENT 881 YS2-1k01.q1k chr09 1168 30 4615 5747 C 1139 93.42 1319 ambiguous_tel 5 ALIGNMENT 0 YS2-1k01.p1k chr16 62 828 1494 1493 F 767 0.00 1174 reject_low 221 ALIGNMENT 41 YS2-1k01.p1k chr15 959 890 1089584 1089653 C 70 87.14 1174 reject_low 262 ALIGNMENT 50 YS2-1k01.p1k chr16 970 865 946378 946483 C 106 83.02 1174 reject_low 225 ALIGNMENT 0 YS2-1k01.p1k chr02 62 712 1705 1704 F 651 0.00 1174 reject_low 88 ALIGNMENT 0 YS2-1k01.p1k chr04 869 789 1530087 1530086 C 81 0.00 1174 reject_low 264 ALIGNMENT 0 YS2-1k01.p1k chr12 745 62 1070027 1070026 C 684 0.00 1174 reject_low 30 ALIGNMENT 135 YS2-1k01.p1k chr09 710 970 1722 1982 F 261 85.06 1174 reject_low 124 ALIGNMENT 0 YS2-1k01.p1k chr02 62 709 1918 1917 F 648 0.00 1174 reject_low 93 ALIGNMENT 33 YS2-1k01.p1k chr12 709 774 2150 2215 F 66 84.85 1174 reject_low 301 ALIGNMENT 41 YS2-1k01.p1k chr14 890 959 1574 1643 F 70 87.14 1174 reject_low 261 ALIGNMENT 0 YS2-1k01.p1k chr15 869 847 1089230 1089229 C 23 0.00 1174 reject_low 248 ALIGNMENT 31 YS2-1k01.p1k chr02 721 774 2361 2414 F 54 87.04 1174 reject_low 289 ALIGNMENT 70 YS2-1k01.p1k chr16 955 829 946357 946483 C 127 85.83 1174 reject_low 204 ALIGNMENT 0 YS2-1k01.p1k chr05 62 864 1481 1480 F 803 0.00 1174 reject_low 68 ALIGNMENT 0 YS2-1k01.q1k chr16 426 739 944166 944165 F 314 0.00 1319 reject_low 15 ALIGNMENT 41 YS2-1k01.p1k chr07 959 890 1089325 1089394 C 70 87.14 1174 reject_low 258 ALIGNMENT 43 YS2-1k01.p1k chr14 721 788 1909 1976 F 68 89.71 1174 reject_low 269 ALIGNMENT 136 YS2-1k01.p1k chr12 710 974 1791 2055 F 265 84.91 1174 reject_low 122 ALIGNMENT 0 YS2-1k01.p1k chr10 62 864 1680 1679 F 803 0.00 1174 reject_low 211 ALIGNMENT 44 YS2-1k01.p1k chr08 846 710 560417 560553 C 137 78.83 1174 reject_low 252 ALIGNMENT 0 YS2-1k01.p1k chr12 781 62 1076690 1076689 C 720 0.00 1174 reject_low 32 ALIGNMENT 169 YS2-1k01.p1k chr02 710 974 2098 2362 F 265 89.06 1174 reject_low 82 ALIGNMENT 79 YS2-1k01.p1k chr05 955 782 575144 575317 C 174 82.76 1174 reject_low 190 ALIGNMENT 0 YS2-1k01.p1k chr09 62 745 1686 1685 F 684 0.00 1174 reject_low 161 ALIGNMENT 0 YS2-1k01.p1k chr16 62 720 1710 1709 F 659 0.00 1174 reject_low 145 ALIGNMENT 77 YS2-1k01.p1k chr12 709 882 2042 2215 F 174 82.76 1174|0,9 reject_low 298 ALIGNMENT 131 YS2-1k01.p1k chr10 710 969 1849 2108 F 260 84.62 1174 reject_low 133 ALIGNMENT 0 YS2-1k01.p1k chr07 869 775 1088971 1088970 C 95 0.00 1174 reject_low 280 ALIGNMENT 574 YS2-1k01.q1k chr05 802 30 4588 5330 C 773 93.27 1319 reject_low 10 ALIGNMENT 0 YS2-1k01.p1k chr12 62 708 2042 2041 F 647 0.00 1174 reject_low 298 ALIGNMENT 0 YS2-1k01.p1k chr12 62 828 1694 1693 F 767 0.00 1174 reject_low 203 ALIGNMENT 121 YS2-1k01.p1k chr05 710 974 1614 1878 F 265 83.02 1174 reject_low 58 ALIGNMENT 31 YS2-1k01.p1k chr09 890 955 1686 1751 F 66 83.33 1174 reject_low 287 ALIGNMENT 138 YS2-1k01.p1k chr09 710 970 1830 2090 F 261 85.44 1174 reject_low 119 ALIGNMENT 135 YS2-1k01.p1k chr09 721 974 1949 2202 F 254 85.43 1174 reject_low 127 ALIGNMENT 0 YS2-1k01.p1k chr05 62 781 1470 1469 F 720 0.00 1174 reject_low 63 ALIGNMENT 141 YS2-1k01.p1k chr13 710 970 1703 1963 F 261 85.82 1174 reject_low 105 ALIGNMENT 0 YS2-1k01.p1k chr02 847 869 2414 2413 F 23 0.00 1174 reject_low 251 ALIGNMENT 0 YS2-1k01.p1k chr16 720 62 946304 946303 C 659 0.00 1174 reject_low 135 ALIGNMENT 141 YS2-1k01.p1k chr15 970 710 1089357 1089617 C 261 85.82 1174 reject_low 107 ALIGNMENT 0 YS2-1k01.p1k chr07 781 62 1089395 1089394 C 720 0.00 1174 reject_low 191 ALIGNMENT 0 YS2-1k01.p1k chr16 709 62 946459 946458 C 648 0.00 1174 reject_low 132 ALIGNMENT 233 YS2-1k01.p1k chr16 713 1163 1630 2095 F 451 84.70 1174 reject_low 44 ALIGNMENT 131 YS2-1k01.p1k chr13 721 918 1894 2091 F 198 89.90 1174 reject_low 143 ALIGNMENT 0 YS2-1k01.p1k chr12 62 712 1902 1901 F 651 0.00 1174 reject_low 70 ALIGNMENT 124 YS2-1k01.p1k chr02 713 974 1597 1858 F 262 83.59 1174 reject_low 137 ALIGNMENT 0 YS2-1k01.p1k chr04 712 62 1530378 1530377 C 651 0.00 1174 reject_low 77 ALIGNMENT 0 YS2-1k01.p1k chr07 712 62 1089284 1089283 C 651 0.00 1174 reject_low 72 ALIGNMENT 0 YS2-1k01.p1k chr13 62 864 1678 1677 F 803 0.00 1174 reject_low 242 ALIGNMENT 0 YS2-1k01.p1k chr02 62 709 1990 1989 F 648 0.00 1174 reject_low 96 ALIGNMENT 43 YS2-1k01.p1k chr07 788 721 1088992 1089059 C 68 89.71 1174 reject_low 266 ALIGNMENT 43 YS2-1k01.p1k chr16 955 890 946429 946494 C 66 89.39 1174 reject_low 254 ALIGNMENT 43 YS2-1k01.p1k chr13 721 788 2002 2069 F 68 89.71 1174 reject_low 268 ALIGNMENT 50 YS2-1k01.p1k chr12 865 970 1694 1799 F 106 83.02 1174 reject_low 224 ALIGNMENT 0 YS2-1k01.p1k chr12 874 873 2207 7345 F 0 0.00 1174 reject_low 298 ALIGNMENT 0 YS2-1k01.p1k chr09 62 709 1722 1721 F 648 0.00 1174 reject_low 124 ALIGNMENT 0 YS2-1k01.p1k chr05 828 62 575307 575306 C 767 0.00 1174 reject_low 215 ALIGNMENT 199 YS2-1k01.p1k chr07 974 713 1089022 1089283 C 262 93.13 1174 reject_low 72 ALIGNMENT 43 YS2-1k01.p1k chr12 721 788 2126 2193 F 68 89.71 1174|0,3 reject_low 299 ALIGNMENT 0 YS2-1k01.q1k chr12 62 910 1067125 1067124 F 849 0.00 1319 reject_low 19,20,22,23,24,25,26,27,28,29,30,31,32,33,34,35,36,37,38,39,294,295,296,297 ALIGNMENT 47 YS2-1k01.p1k chr12 846 710 1069602 1069738 C 137 79.56 1174 reject_low 36 ALIGNMENT 0 YS2-1k01.p1k chr08 62 889 1651 1650 F 828 0.00 1174 reject_low 222 ALIGNMENT 108 YS2-1k01.p1k chr02 721 974 1821 2074 F 254 81.89 1174 reject_low 157 ALIGNMENT 35 YS2-1k01.p1k chr10 710 751 2065 2106 F 42 97.62 1174 reject_low 273 ALIGNMENT 41 YS2-1k01.p1k chr05 959 890 575248 575317 C 70 87.14 1174 reject_low 257 ALIGNMENT 0 YS2-1k01.p1k chr09 62 709 2046 2045 F 648 0.00 1174 reject_low 95 ALIGNMENT 779 YS2-1k01.p1k chr12 32 955 1005 1928 F 924 95.13 1174 reject_low 16 ALIGNMENT 37 YS2-1k01.p1k chr08 788 721 560439 560506 C 68 86.76 1174 reject_low 275 ALIGNMENT 43 YS2-1k01.p1k chr12 890 955 1683 1748 F 66 89.39 1174 reject_low 253 ALIGNMENT 0 YS2-1k01.p1k chr05 62 709 1614 1613 F 648 0.00 1174 reject_low 58 ALIGNMENT 0 YS2-1k01.p1k chr02 62 708 1953 1952 F 647 0.00 1174 reject_low 128 ALIGNMENT 359 YS2-1k01.q1k chr06 423 30 3050 3446 C 394 97.46 1319 reject_low 18 ALIGNMENT 0 YS2-1k01.p1k chr14 62 709 1862 1861 F 648 0.00 1174 reject_low 233 ALIGNMENT 0 YS2-1k01.p1k chr09 62 709 1758 1757 F 648 0.00 1174 reject_low 149 ALIGNMENT 0 YS2-1k01.p1k chr12 720 62 1076463 1076462 C 659 0.00 1174 reject_low 29 ALIGNMENT 79 YS2-1k01.p1k chr15 955 782 1089480 1089653 C 174 82.76 1174 reject_low 197 ALIGNMENT 116 YS2-1k01.p1k chr08 955 710 560560 560805 C 246 83.74 1174 reject_low 155 ALIGNMENT 141 YS2-1k01.p1k chr12 970 710 1076393 1076653 C 261 85.82 1174 reject_low 25 ALIGNMENT 0 YS2-1k01.p1k chr15 708 62 1089295 1089294 C 647 0.00 1174 reject_low 284 ALIGNMENT 89 YS2-1k01.p1k chr02 709 974 1881 2146 F 266 78.95 1174 reject_low 164 ALIGNMENT 208 YS2-1k01.p1k chr02 721 1163 2145 2602 F 443 83.07 1174 reject_low 49 ALIGNMENT 0 YS2-1k01.p1k chr05 62 709 1542 1541 F 648 0.00 1174 reject_low 55 ALIGNMENT 79 YS2-1k01.p1k chr10 782 955 1669 1842 F 174 82.76 1174 reject_low 194 ALIGNMENT 0 YS2-1k01.p1k chr10 62 709 2029 2028 F 648 0.00 1174 reject_low 212 ALIGNMENT 0 YS2-1k01.p1k chr04 864 62 1530478 1530477 C 803 0.00 1174 reject_low 237 ALIGNMENT 49 YS2-1k01.p1k chr09 721 938 2165 2382 F 218 75.23 1174 reject_low 246 ALIGNMENT 814 YS2-1k01.p1k chr07 974 32 1089130 1090072 C 943 95.76 1174 ambiguous_tel 8 ALIGNMENT 0 YS2-1k01.p1k chr05 62 709 1578 1577 F 648 0.00 1174 reject_low 57 ALIGNMENT 0 YS2-1k01.p1k chr16 864 62 946484 946483 C 803 0.00 1174 reject_low 225 ALIGNMENT 0 YS2-1k01.p1k chr14 847 869 1998 1997 F 23 0.00 1174 reject_low 233 ALIGNMENT 77 YS2-1k01.p1k chr05 882 709 574893 575066 C 174 82.76 1174 reject_low 183 ALIGNMENT 0 YS2-1k01.p1k chr04 869 775 1530065 1530064 C 95 0.00 1174 reject_low 278 ALIGNMENT 0 YS2-1k01.p1k chr12 720 62 1076355 1076354 C 659 0.00 1174 reject_low 295 ALIGNMENT 0 YS2-1k01.p1k chr16 62 712 1630 1629 F 651 0.00 1174 reject_low 44 ALIGNMENT 0 YS2-1k01.p1k chr05 709 62 575030 575029 C 648 0.00 1174 reject_low 229 ALIGNMENT 23 YS2-1k01.p1k chr06 711 775 1122 1186 F 65 80.00 1174 reject_low 302 ALIGNMENT 0 YS2-1k01.p1k chr10 62 709 1741 1740 F 648 0.00 1174 reject_low 150 ALIGNMENT 55 YS2-1k01.p1k chr08 955 829 560704 560830 C 127 81.89 1174 reject_low 217 ALIGNMENT 0 YS2-1k01.p1k chr15 720 62 1089319 1089318 C 659 0.00 1174 reject_low 270 ALIGNMENT 0 YS2-1k01.p1k chr04 708 62 1530238 1530237 C 647 0.00 1174 reject_low 199 ALIGNMENT 74 YS2-1k01.p1k chr08 829 974 1662 1807 F 146 84.25 1174 reject_low 182 ALIGNMENT 63 YS2-1k01.p1k chr05 721 898 1877 2054 F 178 79.78 1174 reject_low 65 ALIGNMENT 0 YS2-1k01.p1k chr04 889 62 1530489 1530488 C 828 0.00 1174 reject_low 256 ALIGNMENT 0 YS2-1k01.p1k chr12 62 709 7362 7361 F 648 0.00 1174 reject_low 104 ALIGNMENT 0 YS2-1k01.p1k chr04 709 62 1530453 1530452 C 648 0.00 1174 reject_low 101 ALIGNMENT 0 YS2-1k01.p1k chr14 789 869 1976 1975 F 81 0.00 1174 reject_low 269 ALIGNMENT 199 YS2-1k01.p1k chr05 974 713 574945 575206 C 262 93.13 1174 reject_low 71 ALIGNMENT 574 YS2-1k01.q1k chr12 30 802 1066353 1067095 F 773 93.27 1319 reject_low 9 ALIGNMENT 0 YS2-1k01.p1k chr12 889 775 1070027 1076264 C 115 0.00 1174 reject_low 297 ALIGNMENT 0 YS2-1k01.p1k chr12 62 709 7614 7613 F 648 0.00 1174 reject_low 231 ALIGNMENT 41 YS2-1k01.p1k chr13 890 959 1667 1736 F 70 87.14 1174 reject_low 260 ALIGNMENT 77 YS2-1k01.p1k chr16 709 882 1734 1907 F 174 82.76 1174 reject_low 188 ALIGNMENT 919 YS2-1k01.q1k chr04 30 1168 1526704 1527835 F 1139 94.47 1319 ambiguous_tel 0 ALIGNMENT 0 YS2-1k01.q1k chr12 739 426 9547 9546 C 314 0.00 1319 reject_low 13 ALIGNMENT 0 YS2-1k01.p1k chr04 709 62 1530201 1530200 C 648 0.00 1174 reject_low 247 ALIGNMENT 881 YS2-1k01.q1k chr14 1137 30 4258 5358 C 1108 94.04 1319 ambiguous_tel 7 ALIGNMENT 43 YS2-1k01.p1k chr16 721 788 1818 1885 F 68 89.71 1174 reject_low 271 ALIGNMENT 87 YS2-1k01.p1k chr15 974 746 1089425 1089653 C 229 80.35 1174 reject_low 175 ALIGNMENT 881 YS2-1k01.q1k chr10 1168 30 4598 5730 C 1139 93.42 1319 ambiguous_tel 6 ALIGNMENT 128 YS2-1k01.p1k chr15 918 721 1089229 1089426 C 198 89.39 1174 reject_low 152 ALIGNMENT 0 YS2-1k01.p1k chr15 712 62 1089507 1089506 C 651 0.00 1174 reject_low 48 ALIGNMENT 79 YS2-1k01.p1k chr09 782 955 1686 1859 F 174 82.76 1174 reject_low 193 ALIGNMENT 0 YS2-1k01.p1k chr05 62 709 1506 1505 F 648 0.00 1174 reject_low 60 ALIGNMENT 889 YS2-1k01.q1k chr05 30 1168 571533 572664 F 1139 93.59 1319 ambiguous_tel 3 ALIGNMENT 0 YS2-1k01.q1k chr05 910 62 4559 4558 C 849 0.00 1319 reject_low 21,52,54,55,56,57,58,59,60,61,62,63,64,65,66,67,68,69 ALIGNMENT 0 YS2-1k01.p1k chr02 789 869 2392 2391 F 81 0.00 1174 reject_low 274 ALIGNMENT 0 YS2-1k01.p1k chr12 708 62 1076331 1076330 C 647 0.00 1174 reject_low 297 ALIGNMENT 0 YS2-1k01.p1k chr08 709 62 560806 560805 C 648 0.00 1174 reject_low 155 ALIGNMENT 148 YS2-1k01.p1k chr02 709 970 1845 2106 F 262 86.64 1174 reject_low 94 ALIGNMENT 68 YS2-1k01.p1k chr10 721 897 1932 2108 F 177 80.79 1174 reject_low 208 ALIGNMENT 0 YS2-1k01.p1k chr07 720 62 1089060 1089059 C 659 0.00 1174 reject_low 266 ALIGNMENT 0 YS2-1k01.p1k chr12 712 62 1069916 1069915 C 651 0.00 1174 reject_low 22 ALIGNMENT 0 YS2-1k01.q1k chr05 910 803 4559 4587 C 108 0.00 1319 reject_low 10 ALIGNMENT 0 YS2-1k01.p1k chr02 62 720 2145 2144 F 659 0.00 1174 reject_low 49 ALIGNMENT 0 YS2-1k01.p1k chr15 708 62 1089403 1089402 C 647 0.00 1174 reject_low 200 ALIGNMENT 67 YS2-1k01.p1k chr06 853 970 892 1009 F 118 86.44 1174 reject_low 202 ALIGNMENT 43 YS2-1k01.p1k chr12 788 721 1069624 1069691 C 68 89.71 1174 reject_low 38 ALIGNMENT 121 YS2-1k01.p1k chr09 710 974 1758 2022 F 265 83.02 1174 reject_low 149 ALIGNMENT 233 YS2-1k01.p1k chr07 1163 713 1088782 1089247 C 451 84.70 1174 reject_low 41 ALIGNMENT 49 YS2-1k01.p1k chr08 865 955 1662 1752 F 91 85.71 1174 reject_low 240 ALIGNMENT 32 YS2-1k01.p1k chr08 709 764 1866 1921 F 56 87.50 1174 reject_low 286 ALIGNMENT 0 YS2-1k01.q1k chr06 739 424 3051 3050 C 316 0.00 1319 reject_low 18 ALIGNMENT 0 YS2-1k01.p1k chr02 62 889 1486 1485 F 828 0.00 1174 reject_low 255 ALIGNMENT 89 YS2-1k01.p1k chr16 974 782 946302 946494 C 193 82.90 1174 reject_low 166 ALIGNMENT 888 YS2-1k01.p1k chr08 32 1163 973 2131 F 1132 93.29 1174 reject_low 11 ALIGNMENT 0 YS2-1k01.p1k chr04 720 62 1530262 1530261 C 659 0.00 1174 reject_low 151 ALIGNMENT 0 YS2-1k01.p1k chr09 62 709 2118 2117 F 648 0.00 1174 reject_low 51 ALIGNMENT 0 YS2-1k01.p1k chr02 62 709 1738 1737 F 648 0.00 1174 reject_low 81 ALIGNMENT 0 YS2-1k01.p1k chr13 62 708 2026 2025 F 647 0.00 1174 reject_low 282 ALIGNMENT 55 YS2-1k01.p1k chr13 829 955 1678 1804 F 127 81.89 1174 reject_low 218 ALIGNMENT 139 YS2-1k01.p1k chr13 710 974 1739 2003 F 265 85.28 1174 reject_low 113 ALIGNMENT 0 YS2-1k01.p1k chr08 869 789 560440 560439 C 81 0.00 1174 reject_low 275 ALIGNMENT 0 YS2-1k01.p1k chr14 62 708 1825 1824 F 647 0.00 1174 reject_low 187 ALIGNMENT 0 YS2-1k01.p1k chr16 828 62 946484 946483 C 767 0.00 1174 reject_low 204 ALIGNMENT 0 YS2-1k01.p1k chr13 789 869 2069 2068 F 81 0.00 1174 reject_low 268 ALIGNMENT 0 YS2-1k01.p1k chr10 816 869 2098 2097 F 54 0.00 1174 reject_low 223 ALIGNMENT 0 YS2-1k01.p1k chr08 62 936 1662 1661 F 875 0.00 1174 reject_low 291 ALIGNMENT 0 YS2-1k01.p1k chr09 62 828 1697 1696 F 767 0.00 1174 reject_low 206 ALIGNMENT 0 YS2-1k01.p1k chr16 709 62 946279 946278 C 648 0.00 1174 reject_low 100 ALIGNMENT 0 YS2-1k01.p1k chr14 62 889 1574 1573 F 828 0.00 1174 reject_low 261 ALIGNMENT 134 YS2-1k01.p1k chr16 955 710 946213 946458 C 246 86.18 1174 reject_low 132 ALIGNMENT 0 YS2-1k01.p1k chr04 869 847 1530065 1530064 C 23 0.00 1174 reject_low 247 ALIGNMENT 55 YS2-1k01.p1k chr12 829 955 7337 7463 F 127 81.89 1174|9,0 reject_low 300 ALIGNMENT 0 YS2-1k01.p1k chr05 62 709 1650 1649 F 648 0.00 1174 reject_low 52 ALIGNMENT 0 YS2-1k01.p1k chr15 709 62 1089582 1089581 C 648 0.00 1174 reject_low 123 ALIGNMENT 914 YS2-1k03.q1k chr04 36 1225 29581 30775 F 1190 93.45 1359 accept 0 ALIGNMENT 951 YS2-1k03.p1k chr04 1178 34 34039 35190 C 1145 95.72 1399 accept 0 ALIGNMENT 912 YS2-1k04.q1k chr02 28 1120 285684 286777 F 1093 95.24 1366 accept 0 ALIGNMENT 928 YS2-1k04.p1k chr02 1044 29 287598 288627 C 1016 97.74 1347 accept 0 ALIGNMENT 38 YS2-1k05.p1k chrm 538 204 3809 4154 C 335 83.58 1295 reject_low 7 ALIGNMENT 22 YS2-1k05.p1k chrm 204 486 45084 45375 F 283 81.63 1295 reject_low 9 ALIGNMENT 0 YS2-1k05.p1k chrm 950 456 12394 12393 C 495 0.00 1295 reject_low 3 ALIGNMENT 0 YS2-1k05.p1k chrm 950 556 54371 54370 C 395 0.00 1295 reject_low 6 ALIGNMENT 0 YS2-1k05.p1k chrm 62 344 30305 30304 F 283 0.00 1295 accept 0 ALIGNMENT 112 YS2-1k05.p1k chrm 455 45 12393 12812 C 411 84.18 1295 reject_low 3 ALIGNMENT 0 YS2-1k05.p1k chrm 490 950 82755 82754 F 461 0.00 1295 reject_low 2 ALIGNMENT 460 YS2-1k05.p1k chrm 345 1152 30305 31098 F 808 94.80 1295 accept 0 ALIGNMENT 0 YS2-1k05.q1k chrm 171 62 31737 31736 C 110 0.00 1387 accept 0 ALIGNMENT 0 YS2-1k05.p1k chrm 950 539 3810 3809 C 412 0.00 1295 reject_low 7 ALIGNMENT 27 YS2-1k05.p1k chrm 340 195 3655 3794 C 146 82.88 1295 reject_low 5 ALIGNMENT 0 YS2-1k05.p1k chrm 199 203 45049 45083 F 5 0.00 1295 reject_low 9 ALIGNMENT 108 YS2-1k05.p1k chrm 45 198 44894 45048 F 154 93.51 1295 reject_low 9 ALIGNMENT 87 YS2-1k05.p1k chrm 201 45 4188 4344 C 157 89.17 1295 reject_low 7 ALIGNMENT 122 YS2-1k05.p1k chrm 73 489 82325 82755 F 417 86.33 1295 reject_low 2 ALIGNMENT 85 YS2-1k05.p1k chrm 202 45 56704 56864 C 158 89.24 1295 reject_low 8 ALIGNMENT 0 YS2-1k05.p1k chrm 477 950 32630 32629 F 474 0.00 1295 reject_low 4 ALIGNMENT 20 YS2-1k05.p1k chrm 555 73 54370 54844 C 483 79.71 1295 reject_low 6 ALIGNMENT 0 YS2-1k05.p1k chrm 62 77 32232 32231 F 16 0.00 1295 reject_low 4 ALIGNMENT 0 YS2-1k05.p1k chrm 203 203 56673 56703 C 1 0.00 1295 reject_low 8 ALIGNMENT 68 YS2-1k05.p1k chrm 78 476 32232 32630 F 399 82.96 1295 reject_low 4 ALIGNMENT 0 YS2-1k05.p1k chrm 203 202 4155 4187 C 2 0.00 1295 reject_low 7 ALIGNMENT 546 YS2-1k05.q1k chrm 963 172 30966 31736 C 792 94.44 1387 accept 0 ALIGNMENT 0 YS2-1k05.q1k chrm 741 582 31339 31338 C 160 0.00 1387 reject_low 1 ALIGNMENT 0 YS2-1k05.p1k chrm 487 950 45375 45374 F 464 0.00 1295 reject_low 9 ALIGNMENT 0 YS2-1k05.p1k chrm 202 950 30344 30343 F 749 0.00 1295 reject_low 1 ALIGNMENT 396 YS2-1k05.q1k chrm 581 30 31338 31878 C 552 97.46 1387 reject_low 1 ALIGNMENT 0 YS2-1k05.p1k chrm 950 341 3656 3655 C 610 0.00 1295 reject_low 5 ALIGNMENT 0 YS2-1k05.p1k chrm 950 484 56395 56394 C 467 0.00 1295 reject_low 8 ALIGNMENT 115 YS2-1k05.p1k chrm 45 201 30188 30344 F 157 94.90 1295 reject_low 1 ALIGNMENT 0 YS2-1k05.p1k chrm 194 62 3795 3794 C 133 0.00 1295 reject_low 5 ALIGNMENT 48 YS2-1k05.p1k chrm 483 204 56394 56672 C 280 84.29 1295 reject_low 8 ALIGNMENT 1003 YS2-1k06.p1k chr13 1207 33 81787 82971 C 1175 95.83 1238 accept 0 ALIGNMENT 858 YS2-1k06.q1k chr13 33 1091 78758 79818 F 1059 94.52 1372 accept 0 ALIGNMENT 847 YS2-1k08.q1k chr15 37 1114 745410 746501 F 1078 94.43 1357 accept 0 ALIGNMENT 862 YS2-1k08.p1k chr15 1082 33 747965 749026 C 1050 95.71 1255 accept 0 ALIGNMENT 844 YS2-1k10.p1k chr16 969 31 584800 585748 C 939 97.76 1300 accept 0 ALIGNMENT 842 YS2-1k10.q1k chr16 27 1068 580746 581780 F 1042 95.11 1400 accept 0 ALIGNMENT 23 YS2-1k11.p1k chr01 940 985 204924 204969 F 46 82.61 1295 reject_low 35 ALIGNMENT 0 YS2-1k11.p1k chr08 62 921 526229 526228 F 860 0.00 1295 reject_low 52 ALIGNMENT 64 YS2-1k11.p1k chr01 895 790 27025 27129 C 106 87.74 1295 reject_low 44,48,68,69,70,72,74 ALIGNMENT 0 YS2-1k11.q1k chr01 513 664 26862 26861 F 152 0.00 1447 reject_low 72 ALIGNMENT 0 YS2-1k11.q1k chr01 155 62 205398 205397 C 94 0.00 1447 reject_low 35 ALIGNMENT 0 YS2-1k11.q1k chr01 664 532 205698 205697 C 133 0.00 1447 reject_low 4 ALIGNMENT 0 YS2-1k11.q1k chr01 149 62 205674 205673 C 88 0.00 1447 reject_low 40 ALIGNMENT 63 YS2-1k11.q1k chr01 156 506 26236 26586 F 351 74.36 1447 reject_low 69 ALIGNMENT 0 YS2-1k11.p1k chr01 789 62 27130 27129 C 728 0.00 1295 reject_low 44,48,68,69,70,72,74 ALIGNMENT 208 YS2-1k11.q1k chr01 531 145 206102 206488 C 387 85.01 1447 reject_low 17 ALIGNMENT 0 YS2-1k11.q1k chr01 62 149 27040 27039 F 88 0.00 1447 reject_low 45 ALIGNMENT 366 YS2-1k11.p1k chr01 168 889 203750 204468 F 722 84.07 1295 reject_low 4 ALIGNMENT 55 YS2-1k11.q1k chr01 518 401 206520 206637 C 118 83.05 1447 reject_low 26 ALIGNMENT 145 YS2-1k11.p1k chr01 628 170 13347 13803 C 459 78.00 1295 reject_low 64 ALIGNMENT 0 YS2-1k11.q1k chr01 664 519 206521 206520 C 146 0.00 1447 reject_low 26 ALIGNMENT 60 YS2-1k11.p1k chr01 784 871 218957 219044 F 88 89.77 1295 reject_low 58 ALIGNMENT 0 YS2-1k11.p1k chr08 62 786 526229 526228 F 725 0.00 1295 reject_low 38 ALIGNMENT 0 YS2-1k11.p1k chr01 169 62 13804 13803 C 108 0.00 1295 reject_low 64 ALIGNMENT 0 YS2-1k11.p1k chr01 674 629 13328 13346 C 46 0.00 1295 reject_low 64 ALIGNMENT 136 YS2-1k11.q1k chr08 377 143 526229 526463 C 235 86.38 1447 manual 42 ALIGNMENT 0 YS2-1k11.p1k chr01 924 62 27130 27129 C 863 0.00 1295 reject_low 45 ALIGNMENT 214 YS2-1k11.q1k chr01 531 145 205697 206083 C 387 85.53 1447 reject_low 4 ALIGNMENT 386 YS2-1k11.p1k chr08 168 1011 525748 526591 F 844 82.70 1295 reject_low 3 ALIGNMENT 0 YS2-1k11.p1k chr08 62 654 526637 526636 F 593 0.00 1295 reject_low 24 ALIGNMENT 0 YS2-1k11.p1k chr01 62 169 218482 218481 F 108 0.00 1295 reject_low 8 ALIGNMENT 0 YS2-1k11.p1k chr01 890 939 204874 205058 F 50 0.00 1295 reject_low 85 ALIGNMENT 0 YS2-1k11.q1k chr01 62 282 13256 13255 F 221 0.00 1447 reject_low 63 ALIGNMENT 0 YS2-1k11.q1k chr01 507 664 26586 26585 F 158 0.00 1447 reject_low 69 ALIGNMENT 195 YS2-1k11.p1k chr08 655 895 527042 527281 F 241 94.19 1295 reject_low 29 ALIGNMENT 0 YS2-1k11.p1k chr01 657 62 26047 26046 C 596 0.00 1295 reject_low 75 ALIGNMENT 0 YS2-1k11.q1k chr01 62 146 25417 25416 F 85 0.00 1447 reject_low 11 ALIGNMENT 0 YS2-1k11.q1k chr01 62 155 26506 26505 F 94 0.00 1447 reject_low 72,74 ALIGNMENT 120 YS2-1k11.p1k chr01 658 1005 205452 205801 F 348 79.02 1295 reject_low 25 ALIGNMENT 0 YS2-1k11.p1k chr08 747 883 539665 539664 F 137 0.00 1295 reject_low 7 ALIGNMENT 240 YS2-1k11.p1k chr08 655 1011 526772 527131 F 357 89.36 1295 reject_low 23 ALIGNMENT 0 YS2-1k11.q1k chr01 664 252 204220 204219 C 413 0.00 1447 ambiguous_tel 57 ALIGNMENT 0 YS2-1k11.q1k chr01 664 532 206103 206102 C 133 0.00 1447 reject_low 17 ALIGNMENT 40 YS2-1k11.q1k chr01 268 512 26618 26862 F 245 73.47 1447 reject_low 72 ALIGNMENT 73 YS2-1k11.p1k chr01 652 889 205176 205413 F 238 78.15 1295 reject_low 32,40 ALIGNMENT 0 YS2-1k11.q1k chr08 142 62 527004 527003 C 81 0.00 1447 reject_low 14 ALIGNMENT 0 YS2-1k11.p1k chr01 632 62 25667 25666 C 571 0.00 1295 reject_low 36 ALIGNMENT 0 YS2-1k11.q1k chr01 62 149 25690 25689 F 88 0.00 1447 reject_low 65 ALIGNMENT 0 YS2-1k11.q1k chr01 664 507 204643 204642 C 158 0.00 1447 reject_low 47 ALIGNMENT 0 YS2-1k11.q1k chr01 240 664 27129 27128 F 425 0.00 1447 reject_low 45 ALIGNMENT 73 YS2-1k11.p1k chr01 889 652 25950 26187 C 238 78.15 1295 reject_low 65,67 ALIGNMENT 59 YS2-1k11.p1k chr01 763 658 25401 25506 C 106 85.85 1295 reject_low 59 ALIGNMENT 47 YS2-1k11.q1k chr01 418 489 13256 13327 F 72 88.89 1447 reject_low 63 ALIGNMENT 55 YS2-1k11.p1k chr01 646 763 206520 206637 F 118 83.05 1295 reject_low 56 ALIGNMENT 0 YS2-1k11.q1k chr08 142 62 527139 527138 C 81 0.00 1447 reject_low 12 ALIGNMENT 92 YS2-1k11.q1k chr01 506 156 205047 205397 C 351 76.92 1447 reject_low 35 ALIGNMENT 0 YS2-1k11.q1k chr01 155 62 205128 205127 C 94 0.00 1447 reject_low 46 ALIGNMENT 187 YS2-1k11.q1k chr01 828 156 203920 204587 C 673 77.12 1447 ambiguous_tel 5 ALIGNMENT 141 YS2-1k11.q1k chr01 156 728 26776 27344 F 573 75.92 1447 reject_low 2 ALIGNMENT 45 YS2-1k11.q1k chr01 283 354 13256 13327 F 72 87.50 1447 reject_low 63 ALIGNMENT 176 YS2-1k11.q1k chr01 518 150 205845 206213 C 369 82.93 1447 reject_low 21 ALIGNMENT 0 YS2-1k11.p1k chr01 657 62 26587 26586 C 596 0.00 1295 reject_low 78 ALIGNMENT 175 YS2-1k11.p1k chr01 658 968 205587 205897 F 311 85.85 1295 reject_low 33 ALIGNMENT 59 YS2-1k11.q1k chr01 251 150 204219 204323 C 102 87.25 1447 ambiguous_tel 57 ALIGNMENT 0 YS2-1k11.q1k chr01 507 664 26721 26720 F 158 0.00 1447 reject_low 70 ALIGNMENT 273 YS2-1k11.p1k chr01 889 168 26895 27613 C 722 79.92 1295 reject_low 2,11,13,15 ALIGNMENT 0 YS2-1k11.q1k chr08 664 532 526886 526885 C 133 0.00 1447 reject_low 9 ALIGNMENT 0 YS2-1k11.p1k chr01 939 896 26440 27024 C 44 0.00 1295 reject_low 70 ALIGNMENT 0 YS2-1k11.p1k chr08 62 654 526772 526771 F 593 0.00 1295 reject_low 23 ALIGNMENT 44 YS2-1k11.p1k chr01 925 1005 204234 204316 F 81 83.95 1295 reject_low 51 ALIGNMENT 270 YS2-1k11.q1k chr08 509 143 526772 527138 C 367 91.55 1447 reject_low 12 ALIGNMENT 0 YS2-1k11.q1k chr08 265 62 527286 527285 C 204 0.00 1447 reject_low 16 ALIGNMENT 0 YS2-1k11.p1k chr01 62 657 204912 204911 F 596 0.00 1295 reject_low 77 ALIGNMENT 0 YS2-1k11.p1k chr01 944 62 13328 13327 C 883 0.00 1295 reject_low 55 ALIGNMENT 0 YS2-1k11.p1k chr01 62 167 203750 203749 F 106 0.00 1295 reject_low 4 ALIGNMENT 0 YS2-1k11.q1k chr01 507 664 26046 26045 F 158 0.00 1447 reject_low 65 ALIGNMENT 24 YS2-1k11.p1k chr01 940 986 205464 205510 F 47 82.98 1295 reject_low 62 ALIGNMENT 0 YS2-1k11.p1k chr01 62 632 206372 206371 F 571 0.00 1295 reject_low 37 ALIGNMENT 60 YS2-1k11.p1k chr01 1005 658 26102 26451 C 348 73.56 1295 reject_low 50 ALIGNMENT 0 YS2-1k11.p1k chr01 657 62 26452 26451 C 596 0.00 1295 reject_low 50 ALIGNMENT 194 YS2-1k11.q1k chr01 506 150 205587 205943 C 357 85.15 1447 reject_low 25 ALIGNMENT 0 YS2-1k11.q1k chr01 375 664 27129 27128 F 290 0.00 1447 reject_low 44 ALIGNMENT 0 YS2-1k11.p1k chr06 883 243 30090 30089 C 641 0.00 1295 accept_chi 0 ALIGNMENT 0 YS2-1k11.p1k chr01 62 939 205329 205328 F 878 0.00 1295 reject_low 61 ALIGNMENT 0 YS2-1k11.q1k chr01 62 155 26776 26775 F 94 0.00 1447 reject_low 2 ALIGNMENT 109 YS2-1k11.p1k chr08 787 1011 526229 526456 F 225 83.11 1295 reject_low 38 ALIGNMENT 0 YS2-1k11.p1k chr08 62 654 527177 527176 F 593 0.00 1295 reject_low 49 ALIGNMENT 0 YS2-1k11.p1k chr01 62 657 205047 205046 F 596 0.00 1295 reject_low 41 ALIGNMENT 0 YS2-1k11.p1k chr01 167 62 27614 27613 C 106 0.00 1295 reject_low 2,11,13,15 ALIGNMENT 0 YS2-1k11.q1k chr01 513 664 26187 26186 F 152 0.00 1447 reject_low 67 ALIGNMENT 82 YS2-1k11.q1k chr01 156 506 26101 26451 F 351 76.07 1447 reject_low 68 ALIGNMENT 0 YS2-1k11.q1k chr01 155 62 204858 204857 C 94 0.00 1447 reject_low 71 ALIGNMENT 0 YS2-1k11.q1k chrm 155 664 48959 48958 F 510 0.00 1447 ambiguous 1 ALIGNMENT 0 YS2-1k11.q1k chr01 144 62 205814 205813 C 83 0.00 1447 reject_low 32 ALIGNMENT 0 YS2-1k11.q1k chr01 664 507 205453 205452 C 158 0.00 1447 reject_low 32 ALIGNMENT 0 YS2-1k11.p1k chr01 737 883 219044 219043 F 147 0.00 1295 reject_low 8 ALIGNMENT 0 YS2-1k11.q1k chr08 664 510 527043 527042 C 155 0.00 1447 reject_low 16 ALIGNMENT 160 YS2-1k11.q1k chr01 266 531 25401 25666 F 266 87.22 1447 reject_low 13 ALIGNMENT 206 YS2-1k11.q1k chr01 147 506 25417 25776 F 360 86.11 1447 reject_low 11 ALIGNMENT 0 YS2-1k11.q1k chr01 155 62 205533 205532 C 94 0.00 1447 reject_low 41 ALIGNMENT 0 YS2-1k11.q1k chr01 532 664 25666 25665 F 133 0.00 1447 reject_low 13 ALIGNMENT 0 YS2-1k11.q1k chr01 144 62 206489 206488 C 83 0.00 1447 reject_low 17 ALIGNMENT 0 YS2-1k11.q1k chr01 220 664 13327 13326 F 445 0.00 1447 reject_low 28 ALIGNMENT 0 YS2-1k11.q1k chr01 225 267 26575 26752 F 43 0.00 1447 reject_low 74 ALIGNMENT 28 YS2-1k11.p1k chr01 1005 940 25967 26034 C 66 80.30 1295 reject_low 66 ALIGNMENT 172 YS2-1k11.p1k chr01 633 1005 205967 206341 F 373 82.31 1295 reject_low 31 ALIGNMENT 0 YS2-1k11.q1k chr01 62 155 26236 26235 F 94 0.00 1447 reject_low 69 ALIGNMENT 189 YS2-1k11.p1k chr01 633 1011 205697 206078 F 379 83.64 1295 reject_low 17,18,19,21 ALIGNMENT 56 YS2-1k11.q1k chr08 242 150 526229 526321 C 93 87.10 1447 manual 60 ALIGNMENT 0 YS2-1k11.q1k chr01 507 664 25911 25910 F 158 0.00 1447 reject_low 15 ALIGNMENT 0 YS2-1k11.p1k chr01 62 657 204777 204776 F 596 0.00 1295 reject_low 79 ALIGNMENT 38 YS2-1k11.q1k chr01 268 512 26753 26997 F 245 73.06 1447 reject_low 74 ALIGNMENT 28 YS2-1k11.p1k chr01 1005 940 26237 26304 C 66 80.30 1295 reject_low 68,69 ALIGNMENT 0 YS2-1k11.q1k chr01 62 400 25401 25400 F 339 0.00 1447 reject_low 27 ALIGNMENT 0 YS2-1k11.p1k chr01 939 896 26305 27024 C 44 0.00 1295 reject_low 68,69 ALIGNMENT 34 YS2-1k11.p1k chr01 889 658 26490 26721 C 232 72.84 1295 reject_low 84 ALIGNMENT 0 YS2-1k11.q1k chr08 149 62 527267 527266 C 88 0.00 1447 reject_low 9 ALIGNMENT 0 YS2-1k11.q1k chr08 142 62 526599 526598 C 81 0.00 1447 manual 6 ALIGNMENT 0 YS2-1k11.p1k chr01 890 939 204604 205058 F 50 0.00 1295 reject_low 83 ALIGNMENT 46 YS2-1k11.q1k chr01 506 156 204642 204992 C 351 72.65 1447 reject_low 47 ALIGNMENT 0 YS2-1k11.q1k chr01 62 155 26641 26640 F 94 0.00 1447 reject_low 48 ALIGNMENT 45 YS2-1k11.p1k chr01 881 810 13256 13327 C 72 87.50 1295 reject_low 64 ALIGNMENT 0 YS2-1k11.p1k chr01 62 939 205464 205463 F 878 0.00 1295 reject_low 62 ALIGNMENT 0 YS2-1k11.q1k chr01 62 155 26371 26370 F 94 0.00 1447 reject_low 70 ALIGNMENT 0 YS2-1k11.q1k chr08 142 62 526734 526733 C 81 0.00 1447 reject_low 3 ALIGNMENT 76 YS2-1k11.q1k chr01 156 374 26911 27129 F 219 78.54 1447 reject_low 44 ALIGNMENT 0 YS2-1k11.q1k chr01 265 62 206638 206637 C 204 0.00 1447 reject_low 22 ALIGNMENT 0 YS2-1k11.p1k chr01 62 632 206237 206236 F 571 0.00 1295 reject_low 22,26 ALIGNMENT 0 YS2-1k11.q1k chr08 664 510 527178 527177 C 155 0.00 1447 reject_low 20,23,24,29 ALIGNMENT 71 YS2-1k11.p1k chr01 658 889 205047 205278 F 232 78.02 1295 reject_low 41 ALIGNMENT 0 YS2-1k11.q1k chr01 355 417 13328 13255 F 63 0.00 1447 reject_low 63 ALIGNMENT 150 YS2-1k11.q1k chr01 145 506 25550 25911 F 362 81.49 1447 reject_low 15 ALIGNMENT 87 YS2-1k11.q1k chr01 150 506 25690 26046 F 357 76.47 1447 reject_low 65 ALIGNMENT 0 YS2-1k11.q1k chr01 149 62 205944 205943 C 88 0.00 1447 reject_low 25 ALIGNMENT 0 YS2-1k11.p1k chr01 62 632 205967 205966 F 571 0.00 1295 reject_low 31 ALIGNMENT 0 YS2-1k11.p1k chr01 651 62 26188 26187 C 590 0.00 1295 reject_low 65,67 ALIGNMENT 44 YS2-1k11.p1k chr01 1005 925 27047 27129 C 81 83.95 1295 reject_low 45 ALIGNMENT 0 YS2-1k11.q1k chr01 149 62 204324 204323 C 88 0.00 1447 ambiguous_tel 57 ALIGNMENT 0 YS2-1k11.p1k chr01 939 890 25765 26354 C 50 0.00 1295 reject_low 78 ALIGNMENT 310 YS2-1k11.q1k chr08 509 145 526502 526866 C 365 95.34 1447 reject_low 10 ALIGNMENT 0 YS2-1k11.q1k chr01 267 225 204746 204788 C 43 0.00 1447 reject_low 71 ALIGNMENT 34 YS2-1k11.p1k chr01 658 889 204642 204873 F 232 72.84 1295 reject_low 85 ALIGNMENT 252 YS2-1k11.q1k chr08 509 143 526637 527003 C 367 89.92 1447 reject_low 14 ALIGNMENT 0 YS2-1k11.p1k chr01 657 62 26722 26721 C 596 0.00 1295 reject_low 84 ALIGNMENT 0 YS2-1k11.q1k chr01 155 62 204588 204587 C 94 0.00 1447 ambiguous_tel 5 ALIGNMENT 59 YS2-1k11.q1k chr01 401 506 25401 25506 F 106 85.85 1447 reject_low 27 ALIGNMENT 47 YS2-1k11.p1k chr01 746 675 13256 13327 C 72 88.89 1295 reject_low 64 ALIGNMENT 0 YS2-1k11.p1k chr01 890 939 205009 205058 F 50 0.00 1295 reject_low 79 ALIGNMENT 314 YS2-1k11.q1k chr08 524 143 526352 526733 C 382 94.50 1447 reject_low 3 ALIGNMENT 35 YS2-1k11.p1k chr01 889 652 26760 26997 C 238 72.69 1295 reject_low 82 ALIGNMENT 0 YS2-1k11.q1k chr01 664 513 205177 205176 C 152 0.00 1447 reject_low 41 ALIGNMENT 0 YS2-1k11.q1k chr01 664 507 205588 205587 C 158 0.00 1447 reject_low 25 ALIGNMENT 35 YS2-1k11.p1k chr01 652 889 204366 204603 F 238 72.69 1295 reject_low 83 ALIGNMENT 0 YS2-1k11.p1k chr01 939 890 25765 25949 C 50 0.00 1295 reject_low 65 ALIGNMENT 0 YS2-1k11.q1k chr01 62 149 13258 13257 F 88 0.00 1447 reject_low 28 ALIGNMENT 0 YS2-1k11.p1k chr01 657 62 25507 25506 C 596 0.00 1295 reject_low 59 ALIGNMENT 59 YS2-1k11.q1k chr01 150 239 27040 27129 F 90 88.89 1447 reject_low 45 ALIGNMENT 150 YS2-1k11.p1k chr01 646 1005 205845 206206 F 360 80.83 1295 reject_low 34 ALIGNMENT 44 YS2-1k11.p1k chr08 922 991 526229 526299 F 70 87.14 1295 reject_low 52 ALIGNMENT 194 YS2-1k11.p1k chr01 633 985 206237 206589 F 353 85.27 1295 reject_low 22,26 ALIGNMENT 0 YS2-1k11.p1k chr01 651 62 26863 26862 C 590 0.00 1295 reject_low 80 ALIGNMENT 0 YS2-1k11.q1k chr01 664 507 205318 205317 C 158 0.00 1447 reject_low 40 ALIGNMENT 148 YS2-1k11.q1k chr01 531 266 206372 206637 C 266 85.71 1447 reject_low 22 ALIGNMENT 0 YS2-1k11.p1k chr01 809 747 13328 13255 C 63 0.00 1295 reject_low 64 ALIGNMENT 0 YS2-1k11.p1k chr08 62 169 539093 539092 F 108 0.00 1295 reject_low 7 ALIGNMENT 0 YS2-1k11.p1k chr08 62 783 539568 539567 F 722 0.00 1295 reject_low 54 ALIGNMENT 0 YS2-1k11.q1k chr08 144 62 526867 526866 C 83 0.00 1447 reject_low 10 ALIGNMENT 0 YS2-1k11.p1k chr01 657 62 26317 26316 C 596 0.00 1295 reject_low 66 ALIGNMENT 0 YS2-1k11.p1k chr01 939 890 25765 26759 C 50 0.00 1295 reject_low 82 ALIGNMENT 45 YS2-1k11.q1k chr01 156 506 26371 26721 F 351 72.65 1447 reject_low 70 ALIGNMENT 0 YS2-1k11.q1k chr01 62 155 26101 26100 F 94 0.00 1447 reject_low 68 ALIGNMENT 43 YS2-1k11.p1k chr01 658 889 204777 205008 F 232 74.14 1295 reject_low 79 ALIGNMENT 0 YS2-1k11.q1k chr01 507 664 26316 26315 F 158 0.00 1447 reject_low 66 ALIGNMENT 0 YS2-1k11.q1k chr01 664 532 205968 205967 C 133 0.00 1447 reject_low 19 ALIGNMENT 0 YS2-1k11.p1k chr01 62 657 204642 204641 F 596 0.00 1295 reject_low 85 ALIGNMENT 123 YS2-1k11.p1k chr01 1005 658 25562 25911 C 348 79.31 1295 reject_low 39 ALIGNMENT 0 YS2-1k11.q1k chr01 664 513 204367 204366 C 152 0.00 1447 reject_low 73 ALIGNMENT 0 YS2-1k11.q1k chr01 664 507 204778 204777 C 158 0.00 1447 reject_low 46 ALIGNMENT 0 YS2-1k11.p1k chr01 62 657 205587 205586 F 596 0.00 1295 reject_low 33 ALIGNMENT 0 YS2-1k11.p1k chr08 62 639 526352 526351 F 578 0.00 1295 reject_low 9,10,12,14 ALIGNMENT 0 YS2-1k11.q1k chr01 507 664 25506 25505 F 158 0.00 1447 reject_low 27 ALIGNMENT 76 YS2-1k11.q1k chr01 386 156 204219 204452 C 231 78.35 1447 ambiguous_tel 53 ALIGNMENT 181 YS2-1k11.p1k chr01 1005 658 25427 25776 C 348 84.20 1295 reject_low 27,28,63 ALIGNMENT 0 YS2-1k11.q1k chr01 664 507 205048 205047 C 158 0.00 1447 reject_low 35 ALIGNMENT 0 YS2-1k11.q1k chr08 664 510 526638 526637 C 155 0.00 1447 reject_low 14 ALIGNMENT 0 YS2-1k11.p1k chr01 62 645 206520 206519 F 584 0.00 1295 reject_low 56 ALIGNMENT 0 YS2-1k11.q1k chr01 155 62 204453 204452 C 94 0.00 1447 ambiguous_tel 53 ALIGNMENT 0 YS2-1k11.p1k chr01 939 890 25765 25814 C 50 0.00 1295 reject_low 75 ALIGNMENT 0 YS2-1k11.q1k chr01 149 62 206214 206213 C 88 0.00 1447 reject_low 21 ALIGNMENT 0 YS2-1k11.q1k chr01 155 62 205263 205262 C 94 0.00 1447 reject_low 43 ALIGNMENT 28 YS2-1k11.p1k chr01 940 1005 205059 205126 F 66 80.30 1295 reject_low 4,79,81,83,85 ALIGNMENT 0 YS2-1k11.q1k chr01 149 62 206619 206618 C 88 0.00 1447 reject_low 18 ALIGNMENT 0 YS2-1k11.p1k chr01 939 890 25765 26489 C 50 0.00 1295 reject_low 84 ALIGNMENT 28 YS2-1k11.p1k chr01 940 1005 205599 205666 F 66 80.30 1295 reject_low 76 ALIGNMENT 0 YS2-1k11.q1k chr01 664 507 204913 204912 C 158 0.00 1447 reject_low 43 ALIGNMENT 0 YS2-1k11.p1k chr01 890 939 205549 205598 F 50 0.00 1295 reject_low 76 ALIGNMENT 0 YS2-1k11.q1k chr01 225 267 26575 26617 F 43 0.00 1447 reject_low 72 ALIGNMENT 0 YS2-1k11.p1k chr01 939 890 25765 26624 C 50 0.00 1295 reject_low 80 ALIGNMENT 0 YS2-1k11.q1k chr01 155 62 204993 204992 C 94 0.00 1447 reject_low 47 ALIGNMENT 0 YS2-1k11.p1k chr08 62 654 526502 526501 F 593 0.00 1295 reject_low 16 ALIGNMENT 48 YS2-1k11.q1k chr01 150 219 13258 13327 F 70 90.00 1447 reject_low 28 ALIGNMENT 285 YS2-1k11.p1k chr08 640 1005 526352 526719 F 366 92.90 1295 reject_low 9,10,12,14 ALIGNMENT 37 YS2-1k11.p1k chr01 889 652 26625 26862 C 238 73.11 1295 reject_low 80 ALIGNMENT 22 YS2-1k11.q1k chr01 156 224 26641 26709 F 69 78.26 1447 reject_low 48 ALIGNMENT 181 YS2-1k11.p1k chr01 633 1005 206102 206476 F 373 83.11 1295 reject_low 30 ALIGNMENT 0 YS2-1k11.p1k chr01 651 62 26998 26997 C 590 0.00 1295 reject_low 82 ALIGNMENT 28 YS2-1k11.p1k chr01 940 1005 205194 205261 F 66 80.30 1295 reject_low 77 ALIGNMENT 64 YS2-1k11.p1k chr01 889 658 25815 26046 C 232 77.16 1295 reject_low 75 ALIGNMENT 91 YS2-1k11.q1k chr01 156 506 25966 26316 F 351 76.92 1447 reject_low 66 ALIGNMENT 22 YS2-1k11.q1k chr01 156 224 26506 26574 F 69 78.26 1447 reject_low 72,74 ALIGNMENT 0 YS2-1k11.p1k chr01 62 632 206102 206101 F 571 0.00 1295 reject_low 30 ALIGNMENT 0 YS2-1k11.q1k chr08 664 525 526353 526352 C 140 0.00 1447 reject_low 3 ALIGNMENT 0 YS2-1k11.q1k chr01 62 155 25966 25965 F 94 0.00 1447 reject_low 66 ALIGNMENT 0 YS2-1k11.p1k chr01 62 657 205317 205316 F 596 0.00 1295 reject_low 76 ALIGNMENT 193 YS2-1k11.q1k chr01 531 145 205967 206353 C 387 83.72 1447 reject_low 19 ALIGNMENT 147 YS2-1k11.q1k chr01 506 145 205452 205813 C 362 81.22 1447 reject_low 32 ALIGNMENT 0 YS2-1k11.p1k chr01 896 939 204339 204923 F 44 0.00 1295 reject_low 35 ALIGNMENT 87 YS2-1k11.q1k chr01 156 512 25831 26187 F 357 76.47 1447 reject_low 67 ALIGNMENT 0 YS2-1k11.q1k chr08 664 510 526503 526502 C 155 0.00 1447 reject_low 10 ALIGNMENT 0 YS2-1k11.p1k chr01 62 632 205697 205696 F 571 0.00 1295 reject_low 17,18,19,21 ALIGNMENT 302 YS2-1k11.q1k chr08 694 143 526050 526598 C 552 85.87 1447 manual 6 ALIGNMENT 0 YS2-1k11.q1k chr01 62 265 25401 25400 F 204 0.00 1447 reject_low 13 ALIGNMENT 0 YS2-1k11.p1k chr01 62 777 204219 204218 F 716 0.00 1295 reject_low 35,43,46,47,71,73 ALIGNMENT 22 YS2-1k11.q1k chr01 224 156 204654 204722 C 69 78.26 1447 reject_low 73 ALIGNMENT 0 YS2-1k11.q1k chr01 664 387 204220 204219 C 278 0.00 1447 ambiguous_tel 53 ALIGNMENT 78 YS2-1k11.q1k chrm 31 154 48836 48959 F 124 100.00 1447 ambiguous 1 ALIGNMENT 0 YS2-1k11.p1k chr01 939 890 26035 26084 C 50 0.00 1295 reject_low 66 ALIGNMENT 0 YS2-1k11.p1k chr01 62 924 204234 204233 F 863 0.00 1295 reject_low 51 ALIGNMENT 0 YS2-1k11.p1k chr01 890 939 204469 205058 F 50 0.00 1295 reject_low 4 ALIGNMENT 37 YS2-1k11.p1k chr01 652 889 204501 204738 F 238 73.11 1295 reject_low 81 ALIGNMENT 279 YS2-1k11.p1k chr08 655 1011 526502 526861 F 357 93.00 1295 reject_low 16 ALIGNMENT 71 YS2-1k11.p1k chr01 889 658 26085 26316 C 232 78.02 1295 reject_low 66 ALIGNMENT 0 YS2-1k11.q1k chr01 507 664 26451 26450 F 158 0.00 1447 reject_low 68 ALIGNMENT 206 YS2-1k11.q1k chr01 531 150 206237 206618 C 382 85.08 1447 reject_low 18 ALIGNMENT 0 YS2-1k11.q1k chr01 664 532 206373 206372 C 133 0.00 1447 reject_low 22 ALIGNMENT 28 YS2-1k11.p1k chr01 1005 940 25697 25764 C 66 80.30 1295 reject_low 11,13,15,65,75,78,80,82,84 ALIGNMENT 229 YS2-1k11.p1k chr08 655 1005 526637 526989 F 351 88.60 1295 reject_low 24 ALIGNMENT 0 YS2-1k11.q1k chr01 62 144 25550 25549 F 83 0.00 1447 reject_low 15 ALIGNMENT 0 YS2-1k11.p1k chr01 62 657 205452 205451 F 596 0.00 1295 reject_low 25 ALIGNMENT 0 YS2-1k11.q1k chr08 664 243 526230 526229 C 422 0.00 1447 manual 60 ALIGNMENT 61 YS2-1k11.q1k chr01 506 156 204777 205127 C 351 74.07 1447 reject_low 46 ALIGNMENT 28 YS2-1k11.p1k chr01 940 1005 205329 205396 F 66 80.30 1295 reject_low 61 ALIGNMENT 41 YS2-1k11.q1k chr01 512 268 204501 204745 C 245 73.47 1447 reject_low 71 ALIGNMENT 0 YS2-1k11.p1k chr01 939 890 25900 25949 C 50 0.00 1295 reject_low 67 ALIGNMENT 212 YS2-1k11.p1k chr08 170 746 539093 539665 F 577 79.55 1295 reject_low 7 ALIGNMENT 0 YS2-1k11.q1k chr08 664 378 526230 526229 C 287 0.00 1447 manual 42 ALIGNMENT 0 YS2-1k11.q1k chr01 664 519 205846 205845 C 146 0.00 1447 reject_low 21 ALIGNMENT 80 YS2-1k11.q1k chr08 509 401 527177 527285 C 109 91.74 1447 reject_low 20,23,24,29 ALIGNMENT 0 YS2-1k11.p1k chr01 62 645 205845 205844 F 584 0.00 1295 reject_low 34 ALIGNMENT 64 YS2-1k11.p1k chr01 778 895 204219 204338 F 118 86.44 1295 reject_low 35,43,46,47,71,73 ALIGNMENT 0 YS2-1k11.q1k chr01 62 155 26911 26910 F 94 0.00 1447 reject_low 44 ALIGNMENT 0 YS2-1k11.q1k chr01 144 62 206354 206353 C 83 0.00 1447 reject_low 19 ALIGNMENT 0 YS2-1k11.p1k chr01 62 651 205176 205175 F 590 0.00 1295 reject_low 32,40 ALIGNMENT 22 YS2-1k11.q1k chr01 224 156 204789 204857 C 69 78.26 1447 reject_low 71 ALIGNMENT 0 YS2-1k11.p1k chr01 883 764 25402 25401 C 120 0.00 1295 reject_low 59 ALIGNMENT 0 YS2-1k11.p1k chr01 939 890 25765 26894 C 50 0.00 1295 reject_low 11,13,15 ALIGNMENT 80 YS2-1k11.q1k chr01 506 156 204912 205262 C 351 75.78 1447 reject_low 43 ALIGNMENT 296 YS2-1k11.q1k chr08 531 150 526885 527266 C 382 92.93 1447 reject_low 9 ALIGNMENT 31 YS2-1k11.p1k chr01 1011 945 13258 13327 C 67 82.09 1295 reject_low 55 ALIGNMENT 0 YS2-1k11.q1k chr01 507 664 25776 25775 F 158 0.00 1447 reject_low 11 ALIGNMENT 80 YS2-1k11.p1k chr08 655 763 527177 527285 F 109 91.74 1295 reject_low 49 ALIGNMENT 0 YS2-1k11.p1k chr08 62 654 527042 527041 F 593 0.00 1295 reject_low 29 ALIGNMENT 0 YS2-1k11.p1k chr01 657 62 25912 25911 C 596 0.00 1295 reject_low 39 ALIGNMENT 64 YS2-1k11.p1k chr08 784 881 539568 539665 F 98 88.78 1295 reject_low 54 ALIGNMENT 0 YS2-1k11.p1k chr01 890 939 204739 205058 F 50 0.00 1295 reject_low 81 ALIGNMENT 23 YS2-1k11.p1k chr01 985 940 25854 25899 C 46 82.61 1295 reject_low 67 ALIGNMENT 0 YS2-1k11.q1k chr01 267 225 204611 204653 C 43 0.00 1447 reject_low 73 ALIGNMENT 0 YS2-1k11.p1k chr01 62 651 204366 204365 F 590 0.00 1295 reject_low 83 ALIGNMENT 0 YS2-1k11.p1k chr01 62 783 218957 218956 F 722 0.00 1295 reject_low 58 ALIGNMENT 0 YS2-1k11.q1k chr01 225 664 26709 26708 F 440 0.00 1447 reject_low 48 ALIGNMENT 38 YS2-1k11.q1k chr01 512 268 204366 204610 C 245 73.06 1447 reject_low 73 ALIGNMENT 43 YS2-1k11.p1k chr01 889 658 26355 26586 C 232 74.14 1295 reject_low 78 ALIGNMENT 0 YS2-1k11.p1k chr01 62 651 204501 204500 F 590 0.00 1295 reject_low 81 ALIGNMENT 0 YS2-1k11.q1k chr08 400 62 527286 527285 C 339 0.00 1447 reject_low 20,23,24,29 ALIGNMENT 270 YS2-1k11.p1k chr08 633 1011 526885 527266 F 379 90.77 1295 reject_low 20 ALIGNMENT 144 YS2-1k11.p1k chr01 633 881 206372 206620 F 249 86.35 1295 reject_low 37 ALIGNMENT 0 YS2-1k11.p1k chr08 62 167 525748 525747 F 106 0.00 1295 reject_low 3 ALIGNMENT 0 YS2-1k11.q1k chr01 155 62 204723 204722 C 94 0.00 1447 reject_low 73 ALIGNMENT 0 YS2-1k11.q1k chr08 664 510 526773 526772 C 155 0.00 1447 reject_low 12 ALIGNMENT 157 YS2-1k11.p1k chr01 879 633 25420 25666 C 247 88.26 1295 reject_low 36 ALIGNMENT 0 YS2-1k11.q1k chr01 664 532 206238 206237 C 133 0.00 1447 reject_low 18 ALIGNMENT 0 YS2-1k11.q1k chr01 513 664 26997 26996 F 152 0.00 1447 reject_low 74 ALIGNMENT 0 YS2-1k11.p1k chr01 657 62 25777 25776 C 596 0.00 1295 reject_low 27,28,63 ALIGNMENT 85 YS2-1k11.q1k chr01 512 156 205176 205532 C 357 76.19 1447 reject_low 41 ALIGNMENT 85 YS2-1k11.q1k chr01 506 150 205317 205673 C 357 76.19 1447 reject_low 40 ALIGNMENT 61 YS2-1k11.p1k chr01 658 889 205317 205548 F 232 76.72 1295 reject_low 76 ALIGNMENT 23 YS2-1k11.p1k chr01 985 940 26394 26439 C 46 82.61 1295 reject_low 70 ALIGNMENT 206 YS2-1k11.p1k chr01 170 736 218482 219044 F 567 79.37 1295 reject_low 8 ALIGNMENT 0 YS2-1k11.p1k chr01 764 883 206637 206636 F 120 0.00 1295 reject_low 56 ALIGNMENT 0 YS2-1k11.q1k chr01 62 155 25831 25830 F 94 0.00 1447 reject_low 67 ALIGNMENT 0 YS2-1k11.q1k chr08 142 62 526464 526463 C 81 0.00 1447 manual 42 ALIGNMENT 0 YS2-1k11.p1k chr08 764 883 527285 527284 F 120 0.00 1295 reject_low 49 ALIGNMENT 202 YS2-1k11.q1k chr08 509 266 527042 527285 C 244 94.67 1447 reject_low 16 ALIGNMENT 0 YS2-1k11.p1k chr08 62 632 526885 526884 F 571 0.00 1295 reject_low 20 ALIGNMENT 0 YS2-1k11.q1k chr01 144 62 206084 206083 C 83 0.00 1447 reject_low 4 ALIGNMENT 0 YS2-1k11.q1k chr08 149 62 526322 526321 C 88 0.00 1447 manual 60 ALIGNMENT 0 YS2-1k11.p1k chr01 890 939 205144 205193 F 50 0.00 1295 reject_low 77 ALIGNMENT 204 YS2-1k11.p1k chr06 242 33 30089 30298 C 210 99.52 1295 accept_chi 0 ALIGNMENT 0 YS2-1k11.q1k chr01 400 62 206638 206637 C 339 0.00 1447 reject_low 26 ALIGNMENT 58 YS2-1k11.p1k chr01 658 889 204912 205143 F 232 76.29 1295 reject_low 77 ALIGNMENT 0 YS2-1k11.q1k chr01 664 513 204502 204501 C 152 0.00 1447 reject_low 71 ALIGNMENT 0 YS2-1k11.q1k chr01 490 664 13327 13326 F 175 0.00 1447 reject_low 63 ALIGNMENT 0 YS2-1k12.p1k chr03 489 845 143077 143076 F 357 0.00 1288 ambiguous_trans_ua 28 ALIGNMENT 254 YS2-1k12.p1k chr01 491 156 189417 189751 C 336 94.35 1288|1,0 ambiguous_trans_ua 31 ALIGNMENT 0 YS2-1k12.p1k chr03 62 155 168595 168594 F 94 0.00 1288 ambiguous_trans_ua 19 ALIGNMENT 0 YS2-1k12.p1k chr03 165 62 151839 151838 C 104 0.00 1288 ambiguous_trans_ua 25 ALIGNMENT 0 YS2-1k12.p1k chr10 165 62 538339 538338 C 104 0.00 1288 ambiguous_trans_ua 16 ALIGNMENT 0 YS2-1k12.p1k chr12 845 489 946817 946816 C 357 0.00 1288 ambiguous_trans 18 ALIGNMENT 291 YS2-1k12.p1k chr10 155 488 203703 204035 F 334 98.20 1288 ambiguous_trans_ua 13 ALIGNMENT 0 YS2-1k12.p1k chr08 494 845 389517 389516 F 352 0.00 1288 ambiguous_trans_ua 3 ALIGNMENT 0 YS2-1k12.p1k chr08 489 845 92095 92094 F 357 0.00 1288 ambiguous_trans_ua 14 ALIGNMENT 58 YS2-1k12.p1k chr01 149 29 182695 182815 C 121 84.30 1288 ambiguous_trans_ua 21 ALIGNMENT 305 YS2-1k12.p1k chr13 155 488 168348 168681 F 334 99.40 1288 ambiguous_trans_ua 7 ALIGNMENT 836 YS2-1k12.q1k chr12 29 1027 649815 650803 F 999 95.70 1444 accept 0 ALIGNMENT 0 YS2-1k12.p1k chr03 845 456 149514 149513 C 390 0.00 1288 ambiguous_trans_ua 26 ALIGNMENT 49 YS2-1k12.p1k chr10 434 244 204036 204224 C 191 79.58 1288 ambiguous_trans_ua 29 ALIGNMENT 295 YS2-1k12.p1k chr08 163 488 91770 92095 F 326 99.08 1288 ambiguous_trans_ua 14 ALIGNMENT 0 YS2-1k12.p1k chr15 494 845 710029 710028 F 352 0.00 1288 ambiguous_trans 6 ALIGNMENT 0 YS2-1k12.p1k chr01 62 155 165827 165826 F 94 0.00 1288 ambiguous_trans 22 ALIGNMENT 0 YS2-1k12.p1k chr15 62 150 704059 704058 F 89 0.00 1288 ambiguous_trans 4 ALIGNMENT 107 YS2-1k12.p1k chr03 156 488 124131 124462 F 333 80.78 1288 ambiguous_trans_ua 24 ALIGNMENT 302 YS2-1k12.p1k chr05 488 155 62142 62475 C 334 99.10 1288 ambiguous_trans_ua 9 ALIGNMENT 0 YS2-1k12.p1k chr10 456 845 537948 537947 F 390 0.00 1288 ambiguous_trans_ua 30 ALIGNMENT 0 YS2-1k12.p1k chr07 62 175 817418 817417 F 114 0.00 1288 ambiguous_trans 27 ALIGNMENT 0 YS2-1k12.p1k chr01 668 845 166343 166342 F 178 0.00 1288 ambiguous_trans 22,23 ALIGNMENT 0 YS2-1k12.p1k chr09 845 491 246216 246215 C 355 0.00 1288 ambiguous_trans_ua 8 ALIGNMENT 0 YS2-1k12.p1k chr01 489 490 182702 183134 C 0 0.00 1288 ambiguous_trans_ua 32 ALIGNMENT 298 YS2-1k12.p1k chr05 156 488 431486 431818 F 333 98.80 1288 ambiguous_trans_ua 11 ALIGNMENT 0 YS2-1k12.p1k chr01 155 62 189752 189751 C 94 0.00 1288 ambiguous_trans_ua 31 ALIGNMENT 308 YS2-1k12.p1k chr08 152 493 389176 389517 F 342 99.12 1288 ambiguous_trans_ua 3 ALIGNMENT 0 YS2-1k12.p1k chr12 165 62 941511 941510 C 104 0.00 1288 ambiguous_trans 17 ALIGNMENT 65 YS2-1k12.p1k chr07 176 289 817418 817532 F 114 87.72 1288 ambiguous_trans 27 ALIGNMENT 0 YS2-1k12.p1k chr03 488 150 168473 168464 C 339 0.00 1288 ambiguous_trans_ua 5 ALIGNMENT 279 YS2-1k12.p1k chr03 156 488 168595 168928 F 333 97.00 1288 ambiguous_trans_ua 19 ALIGNMENT 315 YS2-1k12.p1k chr04 29 488 645373 645830 F 460 91.74 1288 ambiguous_trans 2 ALIGNMENT 0 YS2-1k12.p1k chr15 845 489 664815 664814 C 357 0.00 1288 ambiguous_trans_ua 10 ALIGNMENT 36 YS2-1k12.p1k chr03 567 489 168393 168472 C 79 84.81 1288 ambiguous_trans_ua 5 ALIGNMENT 0 YS2-1k12.p1k chr10 243 62 204225 204224 C 182 0.00 1288 ambiguous_trans_ua 29 ALIGNMENT 0 YS2-1k12.p1k chr10 845 435 204037 204036 C 411 0.00 1288 ambiguous_trans_ua 29 ALIGNMENT 0 YS2-1k12.p1k chr13 165 62 768869 768868 C 104 0.00 1288 ambiguous_trans_ua 1 ALIGNMENT 0 YS2-1k12.p1k chr15 489 845 704396 704395 F 357 0.00 1288 ambiguous_trans 4 ALIGNMENT 0 YS2-1k12.p1k chr07 290 845 817532 817531 F 556 0.00 1288 ambiguous_trans 27 ALIGNMENT 275 YS2-1k12.p1k chr13 667 166 768365 768868 C 502 87.65 1288 ambiguous_trans_ua 1 ALIGNMENT 76 YS2-1k12.p1k chr03 455 155 149513 149807 C 301 79.07 1288 ambiguous_trans_ua 26 ALIGNMENT 283 YS2-1k12.p1k chr12 488 166 946816 947137 C 323 98.45 1288 ambiguous_trans 18 ALIGNMENT 0 YS2-1k12.p1k chr05 154 62 62476 62475 C 93 0.00 1288 ambiguous_trans_ua 9 ALIGNMENT 107 YS2-1k12.p1k chr03 488 166 151518 151838 C 323 81.42 1288 ambiguous_trans_ua 25 ALIGNMENT 0 YS2-1k12.p1k chr05 489 845 431818 431817 F 357 0.00 1288 ambiguous_trans_ua 11 ALIGNMENT 215 YS2-1k12.p1k chr01 156 489 165827 166164 F 334 90.72 1288 ambiguous_trans 22 ALIGNMENT 0 YS2-1k12.p1k chr03 845 489 90438 90437 C 357 0.00 1288 ambiguous_trans 15 ALIGNMENT 42 YS2-1k12.p1k chr10 338 455 537832 537948 F 118 81.36 1288 ambiguous_trans_ua 30 ALIGNMENT 0 YS2-1k12.p1k chr03 489 845 168928 168927 F 357 0.00 1288 ambiguous_trans_ua 19 ALIGNMENT 0 YS2-1k12.p1k chr08 62 151 389176 389175 F 90 0.00 1288 ambiguous_trans_ua 3 ALIGNMENT 298 YS2-1k12.p1k chr12 156 488 731670 732002 F 333 98.80 1288 ambiguous_trans_ua 12 ALIGNMENT 0 YS2-1k12.p1k chr12 62 155 731670 731669 F 94 0.00 1288 ambiguous_trans_ua 12 ALIGNMENT 0 YS2-1k12.p1k chr12 845 489 941190 941189 C 357 0.00 1288 ambiguous_trans 17 ALIGNMENT 305 YS2-1k12.p1k chr15 151 488 704059 704396 F 338 99.11 1288 ambiguous_trans 4 ALIGNMENT 0 YS2-1k12.p1k chr12 165 62 947138 947137 C 104 0.00 1288 ambiguous_trans 18 ALIGNMENT 0 YS2-1k12.p1k chr13 489 845 168681 168680 F 357 0.00 1288 ambiguous_trans_ua 7 ALIGNMENT 0 YS2-1k12.p1k chr10 845 489 538018 538017 C 357 0.00 1288 ambiguous_trans_ua 16 ALIGNMENT 33 YS2-1k12.p1k chr01 567 489 182623 182702 C 79 83.54 1288|0,1 ambiguous_trans_ua 21,31,32 ALIGNMENT 0 YS2-1k12.p1k chr10 62 337 537832 537831 F 276 0.00 1288 ambiguous_trans_ua 30 ALIGNMENT 0 YS2-1k12.p1k chr01 488 150 182703 182694 C 339 0.00 1288 ambiguous_trans_ua 21 ALIGNMENT 283 YS2-1k12.p1k chr12 488 166 941189 941510 C 323 98.45 1288 ambiguous_trans 17 ALIGNMENT 64 YS2-1k12.p1k chr03 207 488 142798 143077 F 282 77.30 1288 ambiguous_trans_ua 28 ALIGNMENT 0 YS2-1k12.p1k chr05 62 155 431486 431485 F 94 0.00 1288 ambiguous_trans_ua 11 ALIGNMENT 0 YS2-1k12.p1k chr08 62 162 91770 91769 F 101 0.00 1288 ambiguous_trans_ua 14 ALIGNMENT 0 YS2-1k12.p1k chr05 845 489 62143 62142 C 357 0.00 1288 ambiguous_trans_ua 9 ALIGNMENT 0 YS2-1k12.p1k chr01 154 62 183470 183469 C 93 0.00 1288 ambiguous_trans_ua 32 ALIGNMENT 0 YS2-1k12.p1k chr07 178 62 817388 817387 C 117 0.00 1288 ambiguous_trans 20 ALIGNMENT 0 YS2-1k12.p1k chr03 489 845 124462 124461 F 357 0.00 1288 ambiguous_trans_ua 24 ALIGNMENT 0 YS2-1k12.p1k chr13 62 154 168348 168347 F 93 0.00 1288 ambiguous_trans_ua 7 ALIGNMENT 214 YS2-1k12.p1k chr01 156 488 160239 160575 F 333 90.69 1288 ambiguous_trans 23 ALIGNMENT 283 YS2-1k12.p1k chr03 488 166 90437 90758 C 323 98.45 1288 ambiguous_trans 15 ALIGNMENT 304 YS2-1k12.p1k chr09 490 165 246215 246540 C 326 100.00 1288 ambiguous_trans_ua 8 ALIGNMENT 0 YS2-1k12.p1k chr09 164 62 246541 246540 C 103 0.00 1288 ambiguous_trans_ua 8 ALIGNMENT 0 YS2-1k12.p1k chr01 845 568 182624 182623 C 278 0.00 1288 ambiguous_trans_ua 21,31,32 ALIGNMENT 0 YS2-1k12.p1k chr03 62 206 142798 142797 F 145 0.00 1288 ambiguous_trans_ua 28 ALIGNMENT 305 YS2-1k12.p1k chr15 156 493 709692 710029 F 338 99.11 1288 ambiguous_trans 6 ALIGNMENT 280 YS2-1k12.p1k chr07 488 179 817079 817387 C 310 99.35 1288 ambiguous_trans 20 ALIGNMENT 0 YS2-1k12.p1k chr03 154 62 149808 149807 C 93 0.00 1288 ambiguous_trans_ua 26 ALIGNMENT 0 YS2-1k12.p1k chr03 165 62 90759 90758 C 104 0.00 1288 ambiguous_trans 15 ALIGNMENT 32 YS2-1k12.p1k chr01 599 667 166275 166343 F 69 84.06 1288 ambiguous_trans 22,23 ALIGNMENT 0 YS2-1k12.p1k chr13 845 668 768366 768365 C 178 0.00 1288 ambiguous_trans_ua 1 ALIGNMENT 283 YS2-1k12.p1k chr10 488 166 538017 538338 C 323 98.45 1288 ambiguous_trans_ua 16 ALIGNMENT 0 YS2-1k12.p1k chr01 490 598 166165 166274 F 109 0.00 1288 ambiguous_trans 22 ALIGNMENT 0 YS2-1k12.p1k chr04 489 845 645830 645829 F 357 0.00 1288 ambiguous_trans 2 ALIGNMENT 0 YS2-1k12.p1k chr03 62 155 124131 124130 F 94 0.00 1288 ambiguous_trans_ua 24 ALIGNMENT 0 YS2-1k12.p1k chr10 489 845 204035 204034 F 357 0.00 1288 ambiguous_trans_ua 13 ALIGNMENT 78 YS2-1k12.p1k chr01 489 155 183135 183469 C 335 78.51 1288 ambiguous_trans_ua 32 ALIGNMENT 299 YS2-1k12.p1k chr15 488 155 664814 665147 C 334 98.80 1288 ambiguous_trans_ua 10 ALIGNMENT 0 YS2-1k12.p1k chr01 62 155 160239 160238 F 94 0.00 1288 ambiguous_trans 23 ALIGNMENT 66 YS2-1k12.p1k chr03 149 29 168465 168586 C 121 85.95 1288 ambiguous_trans_ua 5 ALIGNMENT 0 YS2-1k12.p1k chr03 845 489 151519 151518 C 357 0.00 1288 ambiguous_trans_ua 25 ALIGNMENT 0 YS2-1k12.p1k chr01 489 598 160576 166274 F 110 0.00 1288 ambiguous_trans 23 ALIGNMENT 0 YS2-1k12.p1k chr03 845 568 168394 168393 C 278 0.00 1288 ambiguous_trans_ua 5 ALIGNMENT 0 YS2-1k12.p1k chr07 845 489 817080 817079 C 357 0.00 1288 ambiguous_trans 20 ALIGNMENT 0 YS2-1k12.p1k chr15 154 62 665148 665147 C 93 0.00 1288 ambiguous_trans_ua 10 ALIGNMENT 0 YS2-1k12.p1k chr12 489 845 732002 732001 F 357 0.00 1288 ambiguous_trans_ua 12 ALIGNMENT 0 YS2-1k12.p1k chr01 490 491 182701 189417 C 0 0.00 1288 ambiguous_trans_ua 31 ALIGNMENT 0 YS2-1k12.p1k chr10 62 154 203703 203702 F 93 0.00 1288 ambiguous_trans_ua 13 ALIGNMENT 0 YS2-1k12.p1k chr15 62 155 709692 709691 F 94 0.00 1288 ambiguous_trans 6 ALIGNMENT 0 YS2-1k13.q1k vc_4 62 361 5830 5829 F 300 0.00 403 reject_low 11 ALIGNMENT 42 YS2-1k13.q1k vc_1 403 362 2472 2513 C 42 100.00 403 reject_low 8 ALIGNMENT 357 YS2-1k13.p1k vc_3 536 1 1214 1749 C 536 90.49 542 reject_vc 5 ALIGNMENT 38 YS2-1k13.q1k vc_7 366 403 13525 13562 F 38 100.00 403 reject_low 13 ALIGNMENT 361 YS2-1k13.p1k vc_6 1 536 3712 4247 F 536 90.30 542 reject_vc 1 ALIGNMENT 36 YS2-1k13.q1k vc_5 400 365 1 36 C 36 100.00 403 reject_low 14 ALIGNMENT 357 YS2-1k13.p1k vc_2 536 1 1214 1749 C 536 90.49 542 reject_vc 4 ALIGNMENT 0 YS2-1k13.q1k vc_5 364 62 5064 5063 C 303 0.00 403 reject_low 12 ALIGNMENT 0 YS2-1k13.q1k vc_2 361 62 2147 2146 C 300 0.00 403 reject_low 9 ALIGNMENT 42 YS2-1k13.q1k vc_3 403 362 2472 2513 C 42 100.00 403 reject_low 10 ALIGNMENT 360 YS2-1k13.p1k vc_5 536 1 4134 4669 C 536 90.67 542 reject_vc 2 ALIGNMENT 39 YS2-1k13.q1k vc_5 403 365 5025 5063 C 39 100.00 403 reject_low 12 ALIGNMENT 0 YS2-1k13.q1k vc_1 361 62 2514 2513 C 300 0.00 403 reject_low 8 ALIGNMENT 0 YS2-1k13.q1k vc_3 361 62 2514 2513 C 300 0.00 403 reject_low 10 ALIGNMENT 352 YS2-1k13.p1k vc_7 1 536 456 991 F 536 89.74 542 reject_vc 6 ALIGNMENT 42 YS2-1k13.q1k vc_2 403 362 2105 2146 C 42 100.00 403 reject_low 9 ALIGNMENT 0 YS2-1k13.q1k vc_7 62 365 13525 13524 F 304 0.00 403 reject_low 13 ALIGNMENT 357 YS2-1k13.p1k vc_1 536 1 1214 1749 C 536 90.49 542 reject_vc 3 ALIGNMENT 0 YS2-1k13.q1k chr12 403 363 74287 74286 C 41 0.00 403 accept 0 ALIGNMENT 352 YS2-1k13.p1k vc_7 1 536 13918 14453 F 536 89.74 542 reject_vc 7 ALIGNMENT 0 YS2-1k13.q1k vc_5 364 62 37 36 C 303 0.00 403 reject_low 14 ALIGNMENT 311 YS2-1k13.q1k chr12 362 33 74286 74615 C 330 99.70 403 accept 0 ALIGNMENT 42 YS2-1k13.q1k vc_4 362 403 5830 5871 F 42 100.00 403 reject_low 11 ALIGNMENT 972 YS2-1k14.p1k chr14 1230 37 613271 614477 C 1194 95.39 1276 accept 0 ALIGNMENT 913 YS2-1k14.q1k chr14 25 1141 609712 610818 F 1117 95.70 1356 accept 0 ALIGNMENT 0 YS2-1k15.q1k chrm 574 378 2576 12243 C 197 0.00 1465 reject_low 12 ALIGNMENT 0 YS2-1k15.q1k chrm 310 62 57072 57071 C 249 0.00 1465 reject_low 8 ALIGNMENT 58 YS2-1k15.p1k chrm 1069 938 78355 78489 C 132 91.67 1348 reject_bad_break 0 reject_low 1,2 ALIGNMENT 0 YS2-1k15.q1k chrm 486 360 71208 71207 C 127 0.00 1465 reject_low 5 ALIGNMENT 0 YS2-1k15.q1k chrm 365 486 34340 34339 F 122 0.00 1465 reject_low 9 ALIGNMENT 39 YS2-1k15.q1k chrm 303 362 66819 66878 F 60 88.33 1465 reject_low 2 ALIGNMENT 46 YS2-1k15.q1k chrm 301 356 29830 29886 F 56 94.64 1465 reject_low 7 ALIGNMENT 0 YS2-1k15.q1k chrm 353 486 2136 2135 F 134 0.00 1465 reject_low 11 ALIGNMENT 0 YS2-1k15.q1k chrm 357 453 29887 34137 F 97 0.00 1465 reject_low 7 ALIGNMENT 0 YS2-1k15.q1k chrm 309 62 71257 71256 C 248 0.00 1465 reject_low 5 ALIGNMENT 35 YS2-1k15.q1k chrm 310 354 83053 83097 F 45 95.56 1465 reject_low 10 ALIGNMENT 0 YS2-1k15.q1k chrm 62 309 83053 83052 F 248 0.00 1465 reject_low 10 ALIGNMENT 0 YS2-1k15.q1k chrm 486 375 57008 57007 C 112 0.00 1465 reject_low 8 ALIGNMENT 33 YS2-1k15.q1k chrm 310 352 46314 46356 F 43 95.35 1465 reject_low 6 ALIGNMENT 0 YS2-1k15.q1k chrm 62 302 66819 66818 F 241 0.00 1465 reject_low 2 ALIGNMENT 38 YS2-1k15.q1k chrm 302 352 48093 48143 F 51 92.16 1465 reject_low 4 ALIGNMENT 0 YS2-1k15.q1k chrm 62 301 48093 48092 F 240 0.00 1465 reject_low 4 ALIGNMENT 0 YS2-1k15.q1k chrm 62 309 46314 46313 F 248 0.00 1465 reject_low 6 ALIGNMENT 41 YS2-1k15.q1k chrm 374 311 57007 57071 C 64 89.06 1465 reject_low 8 ALIGNMENT 33 YS2-1k15.q1k chrm 310 352 2094 2136 F 43 95.35 1465 reject_low 11 ALIGNMENT 0 YS2-1k15.q1k chrm 363 486 66878 66877 F 124 0.00 1465 reject_low 2 ALIGNMENT 0 YS2-1k15.q1k chrm 62 300 29830 29829 F 239 0.00 1465 reject_low 7 ALIGNMENT 37 YS2-1k15.p1k chr03 70 128 273422 273480 F 59 89.83 1348 reject_low 3 ALIGNMENT 0 YS2-1k15.p1k chr03 129 904 273480 273479 F 776 0.00 1348 reject_low 3 ALIGNMENT 42 YS2-1k15.q1k chrm 359 310 71207 71256 C 50 96.00 1465 reject_low 5 ALIGNMENT 0 YS2-1k15.q1k chrm 353 486 46356 46355 F 134 0.00 1465 reject_low 6 ALIGNMENT 0 YS2-1k15.p1k chrm 937 62 78490 78489 C 876 0.00 1348 reject_low 1,2 ALIGNMENT 21 YS2-1k15.p1k chrm 894 932 68020 68056 F 39 92.31 1348 reject_low 5 ALIGNMENT 0 YS2-1k15.p1k chrm 62 893 68020 68019 F 832 0.00 1348 reject_low 5 ALIGNMENT 0 YS2-1k15.q1k chrm 375 486 76657 76656 F 112 0.00 1465 reject_low 1 ALIGNMENT 24 YS2-1k15.q1k chrm 454 524 34138 34210 F 71 80.28 1465 reject_low 7 ALIGNMENT 23 YS2-1k15.p1k chrm 932 897 57823 57857 C 36 94.44 1348 reject_low 4,6 ALIGNMENT 0 YS2-1k15.q1k chrm 62 299 76584 76583 F 238 0.00 1465 reject_low 1 ALIGNMENT 0 YS2-1k15.p1k chrm 937 897 78490 78493 C 41 0.00 1348 reject_bad_break 0 ALIGNMENT 0 YS2-1k15.p1k chrm 896 62 57858 57857 C 835 0.00 1348 reject_low 4,6 ALIGNMENT 0 YS2-1k15.q1k chrm 62 309 34286 34285 F 248 0.00 1465 reject_low 9 ALIGNMENT 607 YS2-1k15.p1k chrm 896 31 78494 79365 C 866 97.92 1348 reject_bad_break 0 ALIGNMENT 0 YS2-1k15.q1k chrm 355 486 83097 83096 F 132 0.00 1465 reject_low 10 ALIGNMENT 48 YS2-1k15.q1k chrm 300 374 76584 76657 F 75 89.33 1465 reject_low 1 ALIGNMENT 22 YS2-1k15.q1k chrm 599 575 2551 2575 C 25 96.00 1465 reject_low 12 ALIGNMENT 0 YS2-1k15.q1k chrm 525 547 34211 34192 F 23 0.00 1465 reject_low 7 ALIGNMENT 0 YS2-1k15.q1k chrm 62 309 2094 2093 F 248 0.00 1465 reject_low 11 ALIGNMENT 42 YS2-1k15.q1k chrm 310 364 34286 34340 F 55 92.73 1465 reject_low 9 ALIGNMENT 333 YS2-1k15.q1k chrm 38 555 77391 77938 F 518 92.66 1465 reject_bad_break 0 ALIGNMENT 37 YS2-1k15.q1k chrm 548 635 34193 34276 F 88 84.09 1465 reject_low 7 ALIGNMENT 0 YS2-1k15.q1k chrm 309 62 12312 12311 C 248 0.00 1465 reject_low 12 ALIGNMENT 49 YS2-1k15.q1k chrm 377 310 12244 12311 C 68 91.18 1465 reject_low 12 ALIGNMENT 0 YS2-1k15.q1k chrm 353 486 48143 48142 F 134 0.00 1465 reject_low 4 ALIGNMENT 851 YS2-1k16.q1k chr07 1073 26 56047 57080 C 1048 94.85 1397 accept 0 ALIGNMENT 966 YS2-1k17.p1k chr10 1142 35 447040 448151 C 1108 97.38 1162 accept 0 ALIGNMENT 799 YS2-1k17.q1k chr10 32 1035 445377 446384 F 1004 94.12 1405 accept 0 ALIGNMENT 79 YS2-1k18.p1k chr04 960 787 1530315 1530488 C 174 82.76 1160 reject_low 171 ALIGNMENT 93 YS2-1k18.p1k chr09 714 979 2082 2346 F 266 79.70 1160 reject_low 150 ALIGNMENT 0 YS2-1k18.p1k chr16 62 749 1483 1482 F 688 0.00 1160 reject_low 166 ALIGNMENT 0 YS2-1k18.p1k chr09 62 724 1949 1948 F 663 0.00 1160 reject_low 106 ALIGNMENT 0 YS2-1k18.p1k chr12 713 62 1076618 1076617 C 652 0.00 1160 reject_low 101 ALIGNMENT 73 YS2-1k18.p1k chr14 713 887 1825 1998 F 175 82.29 1160 reject_low 187 ALIGNMENT 0 YS2-1k18.p1k chr05 62 713 1506 1505 F 652 0.00 1160 reject_low 142 ALIGNMENT 0 YS2-1k18.p1k chr12 62 724 2126 2125 F 663 0.00 1160 reject_low 301,305 ALIGNMENT 0 YS2-1k18.p1k chr06 62 821 892 891 F 760 0.00 1160 reject_low 157 ALIGNMENT 158 YS2-1k18.p1k chr06 787 979 893 1085 F 193 94.82 1160 reject_low 58 ALIGNMENT 60 YS2-1k18.p1k chr05 714 943 1830 2058 F 230 76.96 1160 reject_low 202 ALIGNMENT 67 YS2-1k18.p1k chr06 858 975 892 1009 F 118 86.44 1160 reject_low 195 ALIGNMENT 0 YS2-1k18.p1k chr09 62 712 2189 2188 F 651 0.00 1160 reject_low 222 ALIGNMENT 0 YS2-1k18.p1k chr02 62 712 1953 1952 F 651 0.00 1160 reject_low 108 ALIGNMENT 0 YS2-1k18.p1k chr16 716 62 946240 946239 C 655 0.00 1160 reject_low 35 ALIGNMENT 135 YS2-1k18.p1k chr16 979 714 946122 946386 C 266 84.96 1160 reject_low 92 ALIGNMENT 0 YS2-1k18.p1k chr10 62 724 2004 2003 F 663 0.00 1160 reject_low 144 ALIGNMENT 0 YS2-1k18.p1k chr02 888 907 2414 2413 F 20 0.00 1160 reject_low 169 ALIGNMENT 0 YS2-1k18.p1k chr05 62 713 1722 1721 F 652 0.00 1160 reject_low 140 ALIGNMENT 0 YS2-1k18.p1k chr12 713 62 1076402 1076401 C 652 0.00 1160 reject_low 304 ALIGNMENT 810 YS2-1k18.p1k chr16 36 979 805 1747 F 944 95.66 1160 reject_low 5 ALIGNMENT 134 YS2-1k18.p1k chr10 714 975 1813 2073 F 262 85.11 1160 reject_low 97 ALIGNMENT 0 YS2-1k18.p1k chr13 888 907 2091 2090 F 20 0.00 1160 reject_low 186 ALIGNMENT 32 YS2-1k18.p1k chr13 713 768 2026 2081 F 56 87.50 1160 reject_low 281 ALIGNMENT 0 YS2-1k18.p1k chr05 62 713 1686 1685 F 652 0.00 1160 reject_low 56 ALIGNMENT 147 YS2-1k18.p1k chr08 979 714 560505 560769 C 266 86.47 1160 reject_low 63 ALIGNMENT 132 YS2-1k18.p1k chr04 979 714 1530152 1530416 C 266 84.59 1160 reject_low 98 ALIGNMENT 0 YS2-1k18.p1k chr12 62 749 1683 1682 F 688 0.00 1160 reject_low 145 ALIGNMENT 207 YS2-1k18.p1k chr15 1134 717 1089077 1089506 C 418 84.45 1160 reject_low 30 ALIGNMENT 0 YS2-1k18.p1k chr04 907 852 1530065 1530064 C 56 0.00 1160 reject_low 244 ALIGNMENT 0 YS2-1k18.p1k chr10 62 713 1741 1740 F 652 0.00 1160 reject_low 134 ALIGNMENT 41 YS2-1k18.p1k chr16 895 964 1483 1552 F 70 87.14 1160 reject_low 260 ALIGNMENT 0 YS2-1k18.p1k chr14 62 749 1574 1573 F 688 0.00 1160 reject_low 164 ALIGNMENT 204 YS2-1k18.p1k chr16 1097 717 945849 946239 C 381 85.56 1160 reject_low 35 ALIGNMENT 0 YS2-1k18.p1k chr14 62 894 1574 1573 F 833 0.00 1160 reject_low 258 ALIGNMENT 90 YS2-1k18.p1k chr05 750 960 1470 1679 F 211 82.46 1160 reject_low 155 ALIGNMENT 0 YS2-1k18.p1k chr16 907 794 945985 945984 C 114 0.00 1160 reject_low 273 ALIGNMENT 0 YS2-1k18.p1k chr05 62 713 1650 1649 F 652 0.00 1160 reject_low 50 ALIGNMENT 46 YS2-1k18.p1k chr05 851 714 574893 575029 C 138 79.71 1160 reject_low 235 ALIGNMENT 751 YS2-1k18.p1k chr06 36 981 215 1159 F 946 93.55 1160 reject_low 18 ALIGNMENT 0 YS2-1k18.p1k chr16 62 712 1842 1841 F 651 0.00 1160 reject_low 284 ALIGNMENT 0 YS2-1k18.p1k chr08 769 907 1921 1920 F 139 0.00 1160 reject_low 278 ALIGNMENT 0 YS2-1k18.p1k chr05 62 786 1470 1469 F 725 0.00 1160 reject_low 193 ALIGNMENT 39 YS2-1k18.p1k chr12 793 725 1076287 1076354 C 69 88.41 1160|3,0 reject_low 302,306 ALIGNMENT 370 YS2-1k18.q1k chr16 29 426 943768 944166 F 398 97.99 1393 reject_low 15 ALIGNMENT 39 YS2-1k18.p1k chr12 725 793 2126 2193 F 69 88.41 1160|0,3 reject_low 301,305 ALIGNMENT 0 YS2-1k18.p1k chr04 712 62 1530238 1530237 C 651 0.00 1160 reject_low 190 ALIGNMENT 142 YS2-1k18.p1k chr08 923 725 560417 560614 C 199 91.96 1160 reject_low 95 ALIGNMENT 43 YS2-1k18.p1k chr04 851 714 1530064 1530200 C 138 78.99 1160 reject_low 244 ALIGNMENT 0 YS2-1k18.p1k chr08 794 907 1909 1908 F 114 0.00 1160 reject_low 286 ALIGNMENT 39 YS2-1k18.p1k chr10 725 793 2148 2215 F 69 88.41 1160 reject_low 266 ALIGNMENT 43 YS2-1k18.p1k chr12 851 714 1076265 1076401 C 138 78.99 1160|9,0 reject_low 304 ALIGNMENT 41 YS2-1k18.p1k chr12 895 964 7326 7395 F 70 87.14 1160 reject_low 305 ALIGNMENT 0 YS2-1k18.p1k chr12 869 62 1076679 1076678 C 808 0.00 1160 reject_low 229 ALIGNMENT 32 YS2-1k18.p1k chr04 768 713 1530074 1530129 C 56 87.50 1160 reject_low 275 ALIGNMENT 31 YS2-1k18.p1k chr10 713 755 2172 2214 F 43 93.02 1160 reject_low 274 ALIGNMENT 174 YS2-1k18.p1k chr05 714 979 1650 1914 F 266 89.85 1160 reject_low 50 ALIGNMENT 115 YS2-1k18.p1k chr09 725 981 2021 2276 F 257 82.88 1160 reject_low 136 ALIGNMENT 102 YS2-1k18.p1k chr02 750 960 1486 1695 F 211 84.36 1160 reject_low 147 ALIGNMENT 137 YS2-1k18.p1k chr05 975 714 575021 575281 C 262 85.50 1160 reject_low 76 ALIGNMENT 0 YS2-1k18.p1k chr10 62 786 1669 1668 F 725 0.00 1160 reject_low 176 ALIGNMENT 810 YS2-1k18.p1k chr04 979 36 1530224 1531166 C 944 95.66 1160 reject_low 4 ALIGNMENT 32 YS2-1k18.p1k chr12 768 713 1076275 1076330 C 56 87.50 1160|9,0 reject_low 299 ALIGNMENT 368 YS2-1k18.q1k chr02 426 29 4212 4609 C 398 97.74 1393 reject_low 17 ALIGNMENT 0 YS2-1k18.p1k chr09 62 713 1866 1865 F 652 0.00 1160 reject_low 109 ALIGNMENT 841 YS2-1k18.q1k chr12 29 1020 1072905 1073895 F 992 95.56 1393 reject_low 7 ALIGNMENT 0 YS2-1k18.p1k chr13 794 907 2069 2068 F 114 0.00 1160 reject_low 269 ALIGNMENT 32 YS2-1k18.p1k chr16 768 713 945972 946027 C 56 87.50 1160 reject_low 285 ALIGNMENT 0 YS2-1k18.p1k chr02 62 713 1990 1989 F 652 0.00 1160 reject_low 70 ALIGNMENT 43 YS2-1k18.p1k chr12 851 714 1069602 1069738 C 138 78.99 1160 reject_low 245 ALIGNMENT 0 YS2-1k18.p1k chr12 907 852 1069603 1069602 C 56 0.00 1160 reject_low 245 ALIGNMENT 146 YS2-1k18.p1k chr02 714 975 1918 2178 F 262 86.64 1160 reject_low 66 ALIGNMENT 49 YS2-1k18.p1k chr16 870 960 1494 1584 F 91 85.71 1160 reject_low 233 ALIGNMENT 0 YS2-1k18.p1k chr09 62 708 1897 1896 F 647 0.00 1160 reject_low 54 ALIGNMENT 0 YS2-1k18.p1k chr12 894 62 1076690 1076689 C 833 0.00 1160 reject_low 256 ALIGNMENT 0 YS2-1k18.p1k chr12 759 760 1070017 1076283 C 0 0.00 1160 reject_low 299 ALIGNMENT 0 YS2-1k18.p1k chr07 724 62 1089168 1089167 C 663 0.00 1160 reject_low 118 ALIGNMENT 0 YS2-1k18.p1k chr14 769 907 1988 1987 F 139 0.00 1160 reject_low 282 ALIGNMENT 55 YS2-1k18.p1k chr12 834 960 7337 7463 F 127 81.89 1160|9,0 reject_low 303 ALIGNMENT 91 YS2-1k18.p1k chr02 787 969 1486 1668 F 183 84.15 1160 reject_low 153 ALIGNMENT 0 YS2-1k18.p1k chr12 894 794 1070027 1076286 C 101 0.00 1160 reject_low 306 ALIGNMENT 73 YS2-1k18.p1k chr07 887 713 1088970 1089143 C 175 82.29 1160 reject_low 184 ALIGNMENT 0 YS2-1k18.p1k chr02 62 786 1486 1485 F 725 0.00 1160 reject_low 153 ALIGNMENT 83 YS2-1k18.p1k chr12 750 979 7326 7554 F 230 80.00 1160|10,0 reject_low 298 ALIGNMENT 147 YS2-1k18.p1k chr05 714 979 1542 1806 F 266 86.47 1160 reject_low 62 ALIGNMENT 31 YS2-1k18.p1k chr10 895 960 1669 1734 F 66 83.33 1160 reject_low 290 ALIGNMENT 127 YS2-1k18.p1k chr16 923 725 945962 946159 C 199 89.45 1160 reject_low 124 ALIGNMENT 0 YS2-1k18.p1k chr07 724 62 1089060 1089059 C 663 0.00 1160 reject_low 265 ALIGNMENT 0 YS2-1k18.p1k chr08 786 62 560842 560841 C 725 0.00 1160 reject_low 174 ALIGNMENT 39 YS2-1k18.p1k chr15 793 725 1089251 1089318 C 69 88.41 1160 reject_low 271 ALIGNMENT 0 YS2-1k18.p1k chr08 713 62 560806 560805 C 652 0.00 1160 reject_low 139 ALIGNMENT 0 YS2-1k18.p1k chr02 62 713 1630 1629 F 652 0.00 1160 reject_low 71 ALIGNMENT 56 YS2-1k18.p1k chr10 870 975 1680 1785 F 106 84.91 1160 reject_low 204 ALIGNMENT 82 YS2-1k18.p1k chr06 822 979 892 1049 F 158 84.81 1160 reject_low 157 ALIGNMENT 0 YS2-1k18.p1k chr04 724 62 1530154 1530153 C 663 0.00 1160 reject_low 263 ALIGNMENT 0 YS2-1k18.p1k chr05 62 749 1470 1469 F 688 0.00 1160 reject_low 155 ALIGNMENT 0 YS2-1k18.p1k chr02 794 907 2392 2391 F 114 0.00 1160 reject_low 287 ALIGNMENT 775 YS2-1k18.p1k chr12 36 960 1005 1928 F 925 95.03 1160 reject_low 16 ALIGNMENT 46 YS2-1k18.p1k chr12 714 851 7614 7750 F 138 79.71 1160 reject_low 237 ALIGNMENT 50 YS2-1k18.p1k chr12 870 975 1694 1799 F 106 83.02 1160 reject_low 218 ALIGNMENT 108 YS2-1k18.p1k chr10 725 928 2004 2206 F 204 85.78 1160 reject_low 144 ALIGNMENT 192 YS2-1k18.p1k chr12 979 717 1076317 1076578 C 263 92.40 1160 reject_low 46 ALIGNMENT 0 YS2-1k18.p1k chr08 894 62 560842 560841 C 833 0.00 1160 reject_low 255 ALIGNMENT 0 YS2-1k18.p1k chr05 713 62 575282 575281 C 652 0.00 1160 reject_low 76 ALIGNMENT 122 YS2-1k18.p1k chr05 714 975 1578 1838 F 262 83.59 1160 reject_low 115 ALIGNMENT 0 YS2-1k18.p1k chr05 712 62 574959 574958 C 651 0.00 1160 reject_low 276 ALIGNMENT 0 YS2-1k18.p1k chr15 833 62 1089643 1089642 C 772 0.00 1160 reject_low 215 ALIGNMENT 0 YS2-1k18.p1k chr10 62 869 1680 1679 F 808 0.00 1160 reject_low 204 ALIGNMENT 801 YS2-1k18.p1k chr10 36 979 991 1933 F 944 95.34 1160 ambiguous_tel 2 ALIGNMENT 163 YS2-1k18.p1k chr02 714 981 1738 2004 F 268 88.43 1160 reject_low 51 ALIGNMENT 83 YS2-1k18.p1k chr05 979 750 575089 575317 C 230 80.00 1160 reject_low 159 ALIGNMENT 124 YS2-1k18.p1k chr02 714 960 2026 2271 F 247 85.02 1160 reject_low 125 ALIGNMENT 73 YS2-1k18.p1k chr05 834 960 1481 1607 F 127 86.61 1160 reject_low 194 ALIGNMENT 0 YS2-1k18.p1k chr12 713 62 1069955 1069954 C 652 0.00 1160 reject_low 100 ALIGNMENT 0 YS2-1k18.p1k chr09 62 713 2082 2081 F 652 0.00 1160 reject_low 150 ALIGNMENT 195 YS2-1k18.p1k chr05 979 717 574945 575206 C 263 92.78 1160 reject_low 38 ALIGNMENT 0 YS2-1k18.p1k chr02 852 907 2414 2413 F 56 0.00 1160 reject_low 261 ALIGNMENT 73 YS2-1k18.p1k chr16 887 713 945962 946135 C 175 82.29 1160 reject_low 189 ALIGNMENT 181 YS2-1k18.p1k chr10 714 960 1777 2022 F 247 92.71 1160 reject_low 49 ALIGNMENT 0 YS2-1k18.p1k chr09 62 724 2021 2020 F 663 0.00 1160 reject_low 136 ALIGNMENT 0 YS2-1k18.p1k chr07 786 62 1089395 1089394 C 725 0.00 1160 reject_low 173 ALIGNMENT 0 YS2-1k18.p1k chr07 907 852 1088971 1088970 C 56 0.00 1160 reject_low 236 ALIGNMENT 0 YS2-1k18.p1k chr04 713 62 1530453 1530452 C 652 0.00 1160 reject_low 75 ALIGNMENT 39 YS2-1k18.p1k chr05 793 725 574915 574982 C 69 88.41 1160 reject_low 264 ALIGNMENT 39 YS2-1k18.p1k chr16 725 793 1818 1885 F 69 88.41 1160 reject_low 272 ALIGNMENT 70 YS2-1k18.p1k chr12 887 713 1069602 1069775 C 175 81.71 1160 reject_low 191 ALIGNMENT 34 YS2-1k18.p1k chr06 801 871 1195 1265 F 71 83.10 1160 reject_low 307 ALIGNMENT 0 YS2-1k18.p1k chr02 62 724 2217 2216 F 663 0.00 1160 reject_low 94 ALIGNMENT 207 YS2-1k18.p1k chr04 1134 717 1529912 1530341 C 418 84.45 1160 reject_low 27 ALIGNMENT 124 YS2-1k18.p1k chr06 725 981 940 1195 F 257 84.05 1160 reject_low 112 ALIGNMENT 0 YS2-1k18.p1k chr02 62 894 1486 1485 F 833 0.00 1160 reject_low 251 ALIGNMENT 30 YS2-1k18.p1k chr02 725 768 2361 2404 F 44 90.91 1160 reject_low 291 ALIGNMENT 40 YS2-1k18.p1k chr08 851 714 560417 560553 C 138 78.26 1160 reject_low 262 ALIGNMENT 840 YS2-1k18.q1k chr09 1087 29 4688 5747 C 1059 93.86 1393 reject_low 6 ALIGNMENT 0 YS2-1k18.p1k chr07 712 62 1089036 1089035 C 651 0.00 1160 reject_low 277 ALIGNMENT 0 YS2-1k18.p1k chr12 790 791 1070023 1076289 C 0 0.00 1160 reject_low 302 ALIGNMENT 146 YS2-1k18.p1k chr09 709 979 1897 2166 F 271 85.98 1160 reject_low 54 ALIGNMENT 0 YS2-1k18.p1k chr13 62 894 1667 1666 F 833 0.00 1160 reject_low 257 ALIGNMENT 0 YS2-1k18.p1k chr02 62 724 2073 2072 F 663 0.00 1160 reject_low 105 ALIGNMENT 865 YS2-1k18.q1k chr15 29 1123 1085869 1086964 F 1095 93.79 1393 reject_low 3 ALIGNMENT 0 YS2-1k18.p1k chr16 712 62 946028 946027 C 651 0.00 1160 reject_low 285 ALIGNMENT 0 YS2-1k18.p1k chr05 62 724 1805 1804 F 663 0.00 1160 reject_low 24 ALIGNMENT 0 YS2-1k18.p1k chr12 62 713 1719 1718 F 652 0.00 1160 reject_low 114 ALIGNMENT 0 YS2-1k18.p1k chr08 62 786 1651 1650 F 725 0.00 1160 reject_low 111 ALIGNMENT 0 YS2-1k18.p1k chr12 62 713 7614 7613 F 652 0.00 1160 reject_low 237 ALIGNMENT 41 YS2-1k18.p1k chr02 895 964 1486 1555 F 70 87.14 1160 reject_low 251 ALIGNMENT 195 YS2-1k18.p1k chr13 717 979 1778 2039 F 263 92.78 1160 reject_low 41 ALIGNMENT 0 YS2-1k18.p1k chr10 62 713 2101 2100 F 652 0.00 1160 reject_low 220 ALIGNMENT 0 YS2-1k18.p1k chr12 62 712 2042 2041 F 651 0.00 1160 reject_low 297 ALIGNMENT 0 YS2-1k18.p1k chr10 857 907 2206 2205 F 51 0.00 1160 reject_low 167 ALIGNMENT 0 YS2-1k18.p1k chr12 878 879 1070007 1076273 C 0 0.00 1160 reject_low 300 ALIGNMENT 48 YS2-1k18.p1k chr10 714 820 2101 2206 F 107 84.11 1160 reject_low 220 ALIGNMENT 0 YS2-1k18.p1k chr08 907 852 560418 560417 C 56 0.00 1160 reject_low 262 ALIGNMENT 0 YS2-1k18.p1k chr10 821 907 2206 2205 F 87 0.00 1160 reject_low 220 ALIGNMENT 0 YS2-1k18.p1k chr02 62 716 1705 1704 F 655 0.00 1160 reject_low 60 ALIGNMENT 838 YS2-1k18.q1k chr16 1095 29 4200 5267 C 1067 93.63 1393 reject_low 5 ALIGNMENT 0 YS2-1k18.p1k chr13 62 713 1739 1738 F 652 0.00 1160 reject_low 89 ALIGNMENT 49 YS2-1k18.p1k chr12 960 870 1069925 1070015 C 91 85.71 1160|0,9 reject_low 300 ALIGNMENT 70 YS2-1k18.p1k chr15 887 713 1089229 1089402 C 175 81.71 1160 reject_low 192 ALIGNMENT 0 YS2-1k18.q1k chr16 427 751 944166 944165 F 325 0.00 1393 reject_low 15 ALIGNMENT 137 YS2-1k18.p1k chr04 975 714 1530192 1530452 C 262 85.50 1160 reject_low 75 ALIGNMENT 0 YS2-1k18.p1k chr12 724 62 1076463 1076462 C 663 0.00 1160 reject_low 130 ALIGNMENT 0 YS2-1k18.p1k chr06 775 800 1182 1194 F 26 0.00 1160 reject_low 307 ALIGNMENT 804 YS2-1k18.p1k chr12 36 979 6648 7590 F 944 95.44 1160 reject_low 13 ALIGNMENT 0 YS2-1k18.p1k chr16 713 62 946351 946350 C 652 0.00 1160 reject_low 116 ALIGNMENT 0 YS2-1k18.p1k chr08 62 941 1662 1661 F 880 0.00 1160 reject_low 294 ALIGNMENT 0 YS2-1k18.p1k chr10 62 724 2148 2147 F 663 0.00 1160 reject_low 266 ALIGNMENT 0 YS2-1k18.p1k chr12 713 62 1069739 1069738 C 652 0.00 1160 reject_low 245 ALIGNMENT 0 YS2-1k18.p1k chr16 62 724 1710 1709 F 663 0.00 1160 reject_low 123 ALIGNMENT 0 YS2-1k18.p1k chr14 62 724 1909 1908 F 663 0.00 1160 reject_low 270 ALIGNMENT 192 YS2-1k18.p1k chr15 979 717 1089281 1089542 C 263 92.40 1160 reject_low 47 ALIGNMENT 587 YS2-1k18.q1k chr05 803 29 4588 5330 C 775 93.68 1393 reject_low 9 ALIGNMENT 0 YS2-1k18.p1k chr02 62 869 1497 1496 F 808 0.00 1160 reject_low 223 ALIGNMENT 0 YS2-1k18.p1k chr12 62 724 1874 1873 F 663 0.00 1160 reject_low 73 ALIGNMENT 0 YS2-1k18.p1k chr15 716 62 1089543 1089542 C 655 0.00 1160 reject_low 47 ALIGNMENT 153 YS2-1k18.p1k chr02 717 979 1705 1966 F 263 87.45 1160 reject_low 60 ALIGNMENT 0 YS2-1k18.p1k chr12 62 712 2150 2149 F 651 0.00 1160 reject_low 298 ALIGNMENT 195 YS2-1k18.p1k chr07 979 717 1089022 1089283 C 263 92.78 1160 reject_low 39 ALIGNMENT 207 YS2-1k18.p1k chr12 1134 717 1069450 1069879 C 418 84.45 1160 reject_low 28 ALIGNMENT 0 YS2-1k18.p1k chr04 713 62 1530201 1530200 C 652 0.00 1160 reject_low 244 ALIGNMENT 0 YS2-1k18.p1k chr12 843 842 2207 7345 F 0 0.00 1160 reject_low 303 ALIGNMENT 20 YS2-1k18.p1k chr05 942 964 1481 1503 F 23 95.65 1160 reject_low 293 ALIGNMENT 0 YS2-1k18.p1k chr02 769 907 2404 2403 F 139 0.00 1160 reject_low 291 ALIGNMENT 0 YS2-1k18.p1k chr08 869 62 560831 560830 C 808 0.00 1160 reject_low 228 ALIGNMENT 49 YS2-1k18.p1k chr02 870 960 1497 1587 F 91 85.71 1160 reject_low 223 ALIGNMENT 0 YS2-1k18.p1k chr05 749 62 575318 575317 C 688 0.00 1160 reject_low 159 ALIGNMENT 39 YS2-1k18.p1k chr12 725 793 7661 7728 F 69 88.41 1160 reject_low 267 ALIGNMENT 0 YS2-1k18.p1k chr04 749 62 1530489 1530488 C 688 0.00 1160 reject_low 158 ALIGNMENT 43 YS2-1k18.p1k chr12 895 960 1683 1748 F 66 89.39 1160 reject_low 248 ALIGNMENT 83 YS2-1k18.p1k chr04 979 750 1530260 1530488 C 230 80.00 1160 reject_low 158 ALIGNMENT 102 YS2-1k18.p1k chr09 750 960 1686 1895 F 211 84.36 1160 reject_low 148 ALIGNMENT 0 YS2-1k18.p1k chr08 62 713 1759 1758 F 652 0.00 1160 reject_low 198 ALIGNMENT 0 YS2-1k18.p1k chr08 907 888 560418 560417 C 20 0.00 1160 reject_low 170 ALIGNMENT 0 YS2-1k18.p1k chr14 62 833 1585 1584 F 772 0.00 1160 reject_low 214 ALIGNMENT 207 YS2-1k18.p1k chr12 1134 717 1076113 1076542 C 418 84.45 1160 reject_low 29 ALIGNMENT 0 YS2-1k18.p1k chr12 907 888 1069603 1069602 C 20 0.00 1160 reject_low 191 ALIGNMENT 0 YS2-1k18.p1k chr16 907 888 945963 945962 C 20 0.00 1160 reject_low 189 ALIGNMENT 79 YS2-1k18.p1k chr08 960 787 560668 560841 C 174 82.76 1160 reject_low 174 ALIGNMENT 0 YS2-1k18.p1k chr12 62 941 1694 1693 F 880 0.00 1160 reject_low 295 ALIGNMENT 48 YS2-1k18.p1k chr09 713 903 2189 2378 F 191 76.44 1160 reject_low 222 ALIGNMENT 49 YS2-1k18.p1k chr12 960 870 1076588 1076678 C 91 85.71 1160 reject_low 229 ALIGNMENT 0 YS2-1k18.p1k chr12 907 794 1069625 1069624 C 114 0.00 1160 reject_low 268 ALIGNMENT 141 YS2-1k18.p1k chr10 714 964 1957 2206 F 251 86.85 1160 reject_low 74 ALIGNMENT 0 YS2-1k18.p1k chr16 724 62 946304 946303 C 663 0.00 1160 reject_low 68 ALIGNMENT 49 YS2-1k18.p1k chr05 960 870 575216 575306 C 91 85.71 1160 reject_low 225 ALIGNMENT 0 YS2-1k18.p1k chr06 62 786 893 892 F 725 0.00 1160 reject_low 58 ALIGNMENT 192 YS2-1k18.p1k chr04 979 717 1530116 1530377 C 263 92.40 1160 reject_low 44 ALIGNMENT 0 YS2-1k18.p1k chr10 62 749 1669 1668 F 688 0.00 1160 reject_low 149 ALIGNMENT 0 YS2-1k18.p1k chr06 62 749 893 892 F 688 0.00 1160 reject_low 135 ALIGNMENT 195 YS2-1k18.p1k chr14 717 979 1685 1946 F 263 92.78 1160 reject_low 42 ALIGNMENT 0 YS2-1k18.p1k chr16 941 62 946484 946483 C 880 0.00 1160 reject_low 296 ALIGNMENT 213 YS2-1k18.p1k chr05 1134 717 574741 575170 C 418 84.93 1160 reject_low 19 ALIGNMENT 109 YS2-1k18.p1k chr16 975 750 946270 946494 C 226 84.07 1160 reject_low 141 ALIGNMENT 49 YS2-1k18.p1k chr15 960 870 1089552 1089642 C 91 85.71 1160 reject_low 232 ALIGNMENT 128 YS2-1k18.p1k chr10 714 975 1849 2109 F 262 84.35 1160 reject_low 110 ALIGNMENT 0 YS2-1k18.p1k chr10 756 907 2214 2213 F 152 0.00 1160 reject_low 274 ALIGNMENT 0 YS2-1k18.p1k chr13 62 724 2002 2001 F 663 0.00 1160 reject_low 269 ALIGNMENT 0 YS2-1k18.p1k chr09 62 713 1794 1793 F 652 0.00 1160 reject_low 48 ALIGNMENT 127 YS2-1k18.p1k chr05 923 725 574893 575090 C 199 89.45 1160 reject_low 117 ALIGNMENT 127 YS2-1k18.p1k chr12 714 960 1719 1964 F 247 85.43 1160 reject_low 114 ALIGNMENT 0 YS2-1k18.p1k chr12 62 713 1791 1790 F 652 0.00 1160 reject_low 99 ALIGNMENT 146 YS2-1k18.p1k chr16 979 725 946050 946303 C 255 87.06 1160 reject_low 68 ALIGNMENT 0 YS2-1k18.p1k chr02 62 713 2098 2097 F 652 0.00 1160 reject_low 52 ALIGNMENT 79 YS2-1k18.p1k chr05 960 787 575144 575317 C 174 82.76 1160 reject_low 172 ALIGNMENT 107 YS2-1k18.p1k chr12 750 964 1683 1896 F 215 84.65 1160 reject_low 145 ALIGNMENT 0 YS2-1k18.p1k chr16 62 786 1483 1482 F 725 0.00 1160 reject_low 181 ALIGNMENT 0 YS2-1k18.p1k chr08 62 713 1723 1722 F 652 0.00 1160 reject_low 138 ALIGNMENT 55 YS2-1k18.p1k chr13 834 960 1678 1804 F 127 81.89 1160 reject_low 213 ALIGNMENT 0 YS2-1k18.p1k chr05 62 713 1542 1541 F 652 0.00 1160 reject_low 62 ALIGNMENT 0 YS2-1k18.p1k chr09 62 713 2118 2117 F 652 0.00 1160 reject_low 34 ALIGNMENT 0 YS2-1k18.p1k chr16 894 62 946495 946494 C 833 0.00 1160 reject_low 249 ALIGNMENT 0 YS2-1k18.q1k chr13 751 427 3888 3887 C 325 0.00 1393 reject_low 12 ALIGNMENT 0 YS2-1k18.p1k chr10 794 907 2215 2214 F 114 0.00 1160 reject_low 266 ALIGNMENT 36 YS2-1k18.p1k chr08 725 793 1842 1909 F 69 86.96 1160 reject_low 286 ALIGNMENT 117 YS2-1k18.p1k chr05 714 979 1614 1878 F 266 82.71 1160 reject_low 132 ALIGNMENT 20 YS2-1k18.p1k chr16 964 942 946461 946483 C 23 95.65 1160 reject_low 296 ALIGNMENT 0 YS2-1k18.p1k chr02 62 724 2361 2360 F 663 0.00 1160 reject_low 291 ALIGNMENT 89 YS2-1k18.p1k chr16 979 787 946302 946494 C 193 82.90 1160 reject_low 152 ALIGNMENT 41 YS2-1k18.p1k chr04 964 895 1530419 1530488 C 70 87.14 1160 reject_low 252 ALIGNMENT 154 YS2-1k18.p1k chr02 725 981 1677 1932 F 257 87.94 1160 reject_low 57 ALIGNMENT 104 YS2-1k18.p1k chr02 725 979 1821 2074 F 255 81.57 1160 reject_low 143 ALIGNMENT 0 YS2-1k18.p1k chr12 791 790 2191 7329 F 0 0.00 1160 reject_low 301 ALIGNMENT 0 YS2-1k18.p1k chr15 712 62 1089403 1089402 C 651 0.00 1160 reject_low 192 ALIGNMENT 70 YS2-1k18.p1k chr12 834 960 1694 1820 F 127 85.83 1160 reject_low 196 ALIGNMENT 0 YS2-1k18.p1k chr08 62 869 1662 1661 F 808 0.00 1160 reject_low 227 ALIGNMENT 52 YS2-1k18.p1k chr05 713 871 1901 2058 F 159 78.62 1160 reject_low 206 ALIGNMENT 49 YS2-1k18.p1k chr14 870 960 1585 1675 F 91 85.71 1160 reject_low 231 ALIGNMENT 135 YS2-1k18.p1k chr16 714 979 1555 1819 F 266 84.96 1160 reject_low 91 ALIGNMENT 0 YS2-1k18.p1k chr02 62 713 2278 2277 F 652 0.00 1160 reject_low 261 ALIGNMENT 132 YS2-1k18.p1k chr12 714 979 1791 2055 F 266 84.59 1160 reject_low 99 ALIGNMENT 115 YS2-1k18.p1k chr06 750 981 893 1123 F 232 84.48 1160 reject_low 135 ALIGNMENT 844 YS2-1k18.q1k chr07 29 1179 1085610 1086758 F 1151 92.01 1393 ambiguous_tel 0 ALIGNMENT 139 YS2-1k18.p1k chr10 714 901 2029 2215 F 188 93.09 1160 reject_low 93 ALIGNMENT 0 YS2-1k18.p1k chr13 852 907 2091 2090 F 56 0.00 1160 reject_low 238 ALIGNMENT 0 YS2-1k18.p1k chr07 894 62 1089395 1089394 C 833 0.00 1160 reject_low 254 ALIGNMENT 0 YS2-1k18.p1k chr07 713 62 1089359 1089358 C 652 0.00 1160 reject_low 77 ALIGNMENT 0 YS2-1k18.p1k chr16 62 724 1818 1817 F 663 0.00 1160 reject_low 272 ALIGNMENT 0 YS2-1k18.p1k chr10 62 894 1669 1668 F 833 0.00 1160 reject_low 290 ALIGNMENT 85 YS2-1k18.p1k chr02 713 979 1881 2146 F 267 78.65 1160 reject_low 154 ALIGNMENT 43 YS2-1k18.p1k chr05 870 960 1481 1571 F 91 83.52 1160 reject_low 250 ALIGNMENT 135 YS2-1k18.p1k chr05 979 714 574981 575245 C 266 84.96 1160 reject_low 86 ALIGNMENT 0 YS2-1k18.p1k chr16 907 769 945973 945972 C 139 0.00 1160 reject_low 285 ALIGNMENT 210 YS2-1k18.p1k chr12 717 1134 1938 2367 F 418 84.69 1160 reject_low 25 ALIGNMENT 137 YS2-1k18.p1k chr15 975 714 1089357 1089617 C 262 85.50 1160 reject_low 83 ALIGNMENT 79 YS2-1k18.p1k chr12 960 787 1069853 1070026 C 174 82.76 1160|0,4 reject_low 302 ALIGNMENT 127 YS2-1k18.p1k chr13 725 923 1894 2091 F 199 89.45 1160 reject_low 121 ALIGNMENT 89 YS2-1k18.p1k chr12 787 979 1683 1875 F 193 82.90 1160 reject_low 151 ALIGNMENT 0 YS2-1k18.p1k chr12 842 843 1070007 1076273 C 0 0.00 1160 reject_low 304 ALIGNMENT 137 YS2-1k18.p1k chr12 714 975 7362 7622 F 262 85.50 1160 reject_low 78 ALIGNMENT 20 YS2-1k18.p1k chr12 942 964 1694 1716 F 23 95.65 1160 reject_low 295 ALIGNMENT 0 YS2-1k18.p1k chr15 894 62 1089654 1089653 C 833 0.00 1160 reject_low 259 ALIGNMENT 78 YS2-1k18.p1k chr16 871 714 946050 946206 C 158 84.81 1160 reject_low 168 ALIGNMENT 127 YS2-1k18.p1k chr12 725 923 7553 7750 F 199 89.45 1160 reject_low 120 ALIGNMENT 139 YS2-1k18.p1k chr09 714 981 2046 2312 F 268 85.45 1160 reject_low 69 ALIGNMENT 0 YS2-1k18.p1k chr12 62 833 1694 1693 F 772 0.00 1160 reject_low 196 ALIGNMENT 0 YS2-1k18.p1k chr15 724 62 1089319 1089318 C 663 0.00 1160 reject_low 271 ALIGNMENT 39 YS2-1k18.p1k chr12 793 725 1069624 1069691 C 69 88.41 1160 reject_low 268 ALIGNMENT 0 YS2-1k18.p1k chr15 907 794 1089252 1089251 C 114 0.00 1160 reject_low 271 ALIGNMENT 32 YS2-1k18.p1k chr12 768 713 1069612 1069667 C 56 87.50 1160 reject_low 280 ALIGNMENT 0 YS2-1k18.p1k chr04 724 62 1530262 1530261 C 663 0.00 1160 reject_low 128 ALIGNMENT 153 YS2-1k18.p1k chr16 979 714 946158 946422 C 266 87.22 1160 reject_low 59 ALIGNMENT 21 YS2-1k18.p1k chr09 715 774 2239 2298 F 60 80.00 1160 reject_low 308 ALIGNMENT 0 YS2-1k18.p1k chr12 62 713 1827 1826 F 652 0.00 1160 reject_low 127 ALIGNMENT 0 YS2-1k18.p1k chr16 62 716 1594 1593 F 655 0.00 1160 reject_low 43 ALIGNMENT 0 YS2-1k18.p1k chr05 62 713 1758 1757 F 652 0.00 1160 reject_low 72 ALIGNMENT 0 YS2-1k18.p1k chr12 716 62 1076543 1076542 C 655 0.00 1160 reject_low 29 ALIGNMENT 368 YS2-1k18.q1k chr08 29 426 558222 558619 F 398 97.74 1393 reject_low 14 ALIGNMENT 0 YS2-1k18.p1k chr07 907 888 1088971 1088970 C 20 0.00 1160 reject_low 184 ALIGNMENT 165 YS2-1k18.p1k chr08 979 717 560469 560730 C 263 88.97 1160 reject_low 53 ALIGNMENT 0 YS2-1k18.p1k chr08 724 62 560507 560506 C 663 0.00 1160 reject_low 288 ALIGNMENT 0 YS2-1k18.p1k chr12 712 62 1069668 1069667 C 651 0.00 1160 reject_low 280 ALIGNMENT 0 YS2-1k18.p1k chr12 62 894 1683 1682 F 833 0.00 1160 reject_low 248 ALIGNMENT 0 YS2-1k18.p1k chr08 716 62 560731 560730 C 655 0.00 1160 reject_low 53 ALIGNMENT 137 YS2-1k18.p1k chr12 975 714 1069730 1069990 C 262 85.50 1160 reject_low 79 ALIGNMENT 0 YS2-1k18.p1k chr13 62 713 1955 1954 F 652 0.00 1160 reject_low 238 ALIGNMENT 79 YS2-1k18.p1k chr12 960 787 1076516 1076689 C 174 82.76 1160 reject_low 177 ALIGNMENT 0 YS2-1k18.p1k chr12 62 713 2079 2078 F 652 0.00 1160 reject_low 303 ALIGNMENT 154 YS2-1k18.p1k chr05 714 981 1686 1952 F 268 87.31 1160 reject_low 56 ALIGNMENT 83 YS2-1k18.p1k chr06 725 979 976 1229 F 255 78.82 1160 reject_low 156 ALIGNMENT 0 YS2-1k18.p1k chr14 62 716 1685 1684 F 655 0.00 1160 reject_low 42 ALIGNMENT 0 YS2-1k18.p1k chr12 62 724 7661 7660 F 663 0.00 1160 reject_low 267 ALIGNMENT 39 YS2-1k18.p1k chr16 793 725 945984 946051 C 69 88.41 1160 reject_low 273 ALIGNMENT 49 YS2-1k18.p1k chr08 960 870 560740 560830 C 91 85.71 1160 reject_low 228 ALIGNMENT 141 YS2-1k18.p1k chr05 714 979 1758 2022 F 266 85.71 1160 reject_low 72 ALIGNMENT 0 YS2-1k18.p1k chr05 724 62 574983 574982 C 663 0.00 1160 reject_low 264 ALIGNMENT 112 YS2-1k18.p1k chr08 960 714 560560 560805 C 247 83.40 1160 reject_low 139 ALIGNMENT 0 YS2-1k18.p1k chr09 62 833 1697 1696 F 772 0.00 1160 reject_low 199 ALIGNMENT 0 YS2-1k18.p1k chr02 62 713 1918 1917 F 652 0.00 1160 reject_low 66 ALIGNMENT 195 YS2-1k18.p1k chr12 717 979 7437 7698 F 263 92.78 1160 reject_low 40 ALIGNMENT 0 YS2-1k18.p1k chr12 62 716 1902 1901 F 655 0.00 1160 reject_low 37 ALIGNMENT 0 YS2-1k18.p1k chr04 716 62 1530378 1530377 C 655 0.00 1160 reject_low 44 ALIGNMENT 83 YS2-1k18.p1k chr08 979 750 560613 560841 C 230 80.00 1160 reject_low 161 ALIGNMENT 115 YS2-1k18.p1k chr08 714 901 1723 1909 F 188 88.83 1160 reject_low 138 ALIGNMENT 804 YS2-1k18.p1k chr14 36 979 896 1838 F 944 95.44 1160 ambiguous_tel 1 ALIGNMENT 0 YS2-1k18.p1k chr04 786 62 1530489 1530488 C 725 0.00 1160 reject_low 171 ALIGNMENT 79 YS2-1k18.p1k chr07 960 787 1089221 1089394 C 174 82.76 1160 reject_low 173 ALIGNMENT 0 YS2-1k18.p1k chr06 62 712 1072 1071 F 651 0.00 1160 reject_low 221 ALIGNMENT 0 YS2-1k18.p1k chr02 62 833 1497 1496 F 772 0.00 1160 reject_low 207 ALIGNMENT 0 YS2-1k18.q1k chr02 751 427 4213 4212 C 325 0.00 1393 reject_low 17 ALIGNMENT 0 YS2-1k18.p1k chr13 62 716 1778 1777 F 655 0.00 1160 reject_low 41 ALIGNMENT 0 YS2-1k18.p1k chr16 833 62 946484 946483 C 772 0.00 1160 reject_low 197 ALIGNMENT 124 YS2-1k18.p1k chr04 923 725 1530064 1530261 C 199 88.94 1160 reject_low 128 ALIGNMENT 0 YS2-1k18.p1k chr16 724 62 946052 946051 C 663 0.00 1160 reject_low 273 ALIGNMENT 0 YS2-1k18.p1k chr08 713 62 560554 560553 C 652 0.00 1160 reject_low 262 ALIGNMENT 0 YS2-1k18.p1k chr16 62 713 1519 1518 F 652 0.00 1160 reject_low 84 ALIGNMENT 70 YS2-1k18.p1k chr16 960 834 946357 946483 C 127 85.83 1160 reject_low 197 ALIGNMENT 0 YS2-1k18.p1k chr12 769 907 7740 7739 F 139 0.00 1160 reject_low 279 ALIGNMENT 0 YS2-1k18.p1k chr02 62 712 1881 1880 F 651 0.00 1160 reject_low 154 ALIGNMENT 32 YS2-1k18.p1k chr16 713 768 1842 1897 F 56 87.50 1160 reject_low 284 ALIGNMENT 46 YS2-1k18.p1k chr07 851 714 1088970 1089106 C 138 79.71 1160 reject_low 236 ALIGNMENT 55 YS2-1k18.p1k chr16 834 960 1494 1620 F 127 81.89 1160 reject_low 216 ALIGNMENT 128 YS2-1k18.p1k chr09 714 975 1866 2126 F 262 84.35 1160 reject_low 109 ALIGNMENT 21 YS2-1k18.p1k chr06 715 774 1122 1181 F 60 80.00 1160 reject_low 307 ALIGNMENT 0 YS2-1k18.p1k chr07 907 769 1088981 1088980 C 139 0.00 1160 reject_low 277 ALIGNMENT 0 YS2-1k18.p1k chr13 769 907 2081 2080 F 139 0.00 1160 reject_low 281 ALIGNMENT 0 YS2-1k18.p1k chr14 62 713 1610 1609 F 652 0.00 1160 reject_low 82 ALIGNMENT 0 YS2-1k18.q1k chr06 751 425 3051 3050 C 327 0.00 1393 reject_low 18 ALIGNMENT 79 YS2-1k18.p1k chr12 787 960 7326 7499 F 174 82.76 1160|4,0 reject_low 301 ALIGNMENT 135 YS2-1k18.p1k chr02 714 979 1558 1822 F 266 84.96 1160 reject_low 85 ALIGNMENT 0 YS2-1k18.p1k chr06 62 724 1048 1047 F 663 0.00 1160 reject_low 234 ALIGNMENT 0 YS2-1k18.p1k chr13 62 786 1667 1666 F 725 0.00 1160 reject_low 178 ALIGNMENT 0 YS2-1k18.p1k chr04 907 794 1530087 1530086 C 114 0.00 1160 reject_low 263 ALIGNMENT 32 YS2-1k18.p1k chr07 768 713 1088980 1089035 C 56 87.50 1160 reject_low 277 ALIGNMENT 0 YS2-1k18.p1k chr12 888 907 7750 7749 F 20 0.00 1160 reject_low 185 ALIGNMENT 0 YS2-1k18.p1k chr06 872 907 1265 1264 F 36 0.00 1160 reject_low 307 ALIGNMENT 131 YS2-1k18.p1k chr09 714 975 1722 1982 F 262 84.73 1160 reject_low 103 ALIGNMENT 0 YS2-1k18.p1k chr02 62 713 2026 2025 F 652 0.00 1160 reject_low 125 ALIGNMENT 0 YS2-1k18.p1k chr15 907 852 1089230 1089229 C 56 0.00 1160 reject_low 246 ALIGNMENT 49 YS2-1k18.p1k chr08 895 975 1651 1731 F 81 87.65 1160 reject_low 217 ALIGNMENT 192 YS2-1k18.p1k chr12 979 717 1069654 1069915 C 263 92.40 1160 reject_low 45 ALIGNMENT 0 YS2-1k18.p1k chr15 713 62 1089366 1089365 C 652 0.00 1160 reject_low 246 ALIGNMENT 117 YS2-1k18.p1k chr10 714 979 1741 2005 F 266 82.71 1160 reject_low 134 ALIGNMENT 0 YS2-1k18.p1k chr04 713 62 1530417 1530416 C 652 0.00 1160 reject_low 98 ALIGNMENT 130 YS2-1k18.p1k chr16 960 714 946213 946458 C 247 85.83 1160 reject_low 113 ALIGNMENT 0 YS2-1k18.p1k chr12 716 62 1076579 1076578 C 655 0.00 1160 reject_low 46 ALIGNMENT 70 YS2-1k18.p1k chr04 887 713 1530064 1530237 C 175 81.71 1160 reject_low 190 ALIGNMENT 0 YS2-1k18.p1k chr16 713 62 946459 946458 C 652 0.00 1160 reject_low 113 ALIGNMENT 0 YS2-1k18.p1k chr06 62 724 976 975 F 663 0.00 1160 reject_low 156 ALIGNMENT 124 YS2-1k18.p1k chr15 923 725 1089229 1089426 C 199 88.94 1160 reject_low 131 ALIGNMENT 0 YS2-1k18.p1k chr10 62 713 1777 1776 F 652 0.00 1160 reject_low 49 ALIGNMENT 41 YS2-1k18.p1k chr12 964 895 1069957 1070026 C 70 87.14 1160 reject_low 306 ALIGNMENT 0 YS2-1k18.p1k chr08 716 62 560695 560694 C 655 0.00 1160 reject_low 33 ALIGNMENT 0 YS2-1k18.p1k chr05 62 894 1470 1469 F 833 0.00 1160 reject_low 247 ALIGNMENT 0 YS2-1k18.p1k chr09 62 869 1697 1696 F 808 0.00 1160 reject_low 203 ALIGNMENT 0 YS2-1k18.p1k chr09 775 800 2299 2311 F 26 0.00 1160 reject_low 308 ALIGNMENT 0 YS2-1k18.p1k chr07 712 62 1089144 1089143 C 651 0.00 1160 reject_low 184 ALIGNMENT 0 YS2-1k18.p1k chr02 62 724 2145 2144 F 663 0.00 1160 reject_low 32 ALIGNMENT 32 YS2-1k18.p1k chr15 768 713 1089239 1089294 C 56 87.50 1160 reject_low 283 ALIGNMENT 0 YS2-1k18.p1k chr12 62 713 1755 1754 F 652 0.00 1160 reject_low 61 ALIGNMENT 0 YS2-1k18.p1k chr12 716 62 1069880 1069879 C 655 0.00 1160 reject_low 28 ALIGNMENT 0 YS2-1k18.p1k chr09 62 713 1830 1829 F 652 0.00 1160 reject_low 96 ALIGNMENT 131 YS2-1k18.p1k chr09 725 979 1949 2202 F 255 85.10 1160 reject_low 106 ALIGNMENT 0 YS2-1k18.p1k chr05 62 833 1481 1480 F 772 0.00 1160 reject_low 194 ALIGNMENT 0 YS2-1k18.p1k chr16 713 62 946387 946386 C 652 0.00 1160 reject_low 92 ALIGNMENT 144 YS2-1k18.p1k chr02 713 975 1845 2106 F 263 86.31 1160 reject_low 67 ALIGNMENT 0 YS2-1k18.p1k chr14 62 786 1574 1573 F 725 0.00 1160 reject_low 179 ALIGNMENT 39 YS2-1k18.p1k chr07 793 725 1088992 1089059 C 69 88.41 1160 reject_low 265 ALIGNMENT 55 YS2-1k18.p1k chr05 960 834 575180 575306 C 127 81.89 1160 reject_low 209 ALIGNMENT 0 YS2-1k18.p1k chr14 62 712 1825 1824 F 651 0.00 1160 reject_low 187 ALIGNMENT 132 YS2-1k18.p1k chr12 979 714 1076353 1076617 C 266 84.59 1160 reject_low 101 ALIGNMENT 41 YS2-1k18.p1k chr12 964 895 1076620 1076689 C 70 87.14 1160 reject_low 256 ALIGNMENT 79 YS2-1k18.p1k chr15 960 787 1089480 1089653 C 174 82.76 1160 reject_low 180 ALIGNMENT 865 YS2-1k18.q1k chr04 29 1095 1526704 1527771 F 1067 94.38 1393 reject_low 4 ALIGNMENT 83 YS2-1k18.p1k chr14 750 979 1574 1802 F 230 80.00 1160 reject_low 164 ALIGNMENT 0 YS2-1k18.p1k chr13 62 713 1703 1702 F 652 0.00 1160 reject_low 81 ALIGNMENT 814 YS2-1k18.q1k chr05 29 1020 571533 572523 F 992 94.66 1393 reject_low 8 ALIGNMENT 0 YS2-1k18.p1k chr12 62 716 1938 1937 F 655 0.00 1160 reject_low 25 ALIGNMENT 810 YS2-1k18.p1k chr15 979 36 1089389 1090331 C 944 95.66 1160 reject_low 3 ALIGNMENT 0 YS2-1k18.p1k chr13 62 716 1814 1813 F 655 0.00 1160 reject_low 21 ALIGNMENT 0 YS2-1k18.p1k chr15 869 62 1089643 1089642 C 808 0.00 1160 reject_low 232 ALIGNMENT 0 YS2-1k18.p1k chr12 62 716 7473 7472 F 655 0.00 1160 reject_low 26 ALIGNMENT 0 YS2-1k18.p1k chr05 713 62 575030 575029 C 652 0.00 1160 reject_low 235 ALIGNMENT 198 YS2-1k18.p1k chr12 717 979 1902 2163 F 263 93.16 1160 reject_low 37 ALIGNMENT 0 YS2-1k18.p1k chr16 713 62 946207 946206 C 652 0.00 1160 reject_low 168 ALIGNMENT 40 YS2-1k18.p1k chr02 714 851 2278 2414 F 138 78.26 1160 reject_low 261 ALIGNMENT 0 YS2-1k18.q1k chr12 751 427 4012 4011 C 325 0.00 1393 reject_low 16 ALIGNMENT 0 YS2-1k18.p1k chr13 62 724 1894 1893 F 663 0.00 1160 reject_low 121 ALIGNMENT 55 YS2-1k18.p1k chr02 834 960 1497 1623 F 127 81.89 1160 reject_low 207 ALIGNMENT 0 YS2-1k18.p1k chr12 879 878 2207 7345 F 0 0.00 1160 reject_low 297 ALIGNMENT 41 YS2-1k18.p1k chr07 964 895 1089325 1089394 C 70 87.14 1160 reject_low 254 ALIGNMENT 213 YS2-1k18.p1k chr07 1134 717 1088818 1089247 C 418 84.93 1160 reject_low 20 ALIGNMENT 124 YS2-1k18.p1k chr12 923 725 1076265 1076462 C 199 88.94 1160 reject_low 130 ALIGNMENT 0 YS2-1k18.p1k chr06 62 713 1001 1000 F 652 0.00 1160 reject_low 31 ALIGNMENT 844 YS2-1k18.q1k chr14 1179 29 4210 5358 C 1151 92.01 1393 ambiguous_tel 1 ALIGNMENT 0 YS2-1k18.p1k chr14 62 712 1933 1932 F 651 0.00 1160 reject_low 282 ALIGNMENT 0 YS2-1k18.p1k chr16 869 62 946484 946483 C 808 0.00 1160 reject_low 219 ALIGNMENT 0 YS2-1k18.p1k chr10 62 713 2029 2028 F 652 0.00 1160 reject_low 93 ALIGNMENT 70 YS2-1k18.p1k chr12 887 713 1076265 1076438 C 175 81.71 1160|9,0 reject_low 300 ALIGNMENT 49 YS2-1k18.p1k chr07 960 870 1089293 1089383 C 91 85.71 1160 reject_low 226 ALIGNMENT 0 YS2-1k18.p1k chr05 62 713 1830 1829 F 652 0.00 1160 reject_low 202 ALIGNMENT 137 YS2-1k18.p1k chr14 714 975 1610 1870 F 262 85.50 1160 reject_low 82 ALIGNMENT 0 YS2-1k18.p1k chr09 62 786 1686 1685 F 725 0.00 1160 reject_low 175 ALIGNMENT 0 YS2-1k18.p1k chr12 62 713 7398 7397 F 652 0.00 1160 reject_low 88 ALIGNMENT 117 YS2-1k18.p1k chr09 714 979 1758 2022 F 266 82.71 1160 reject_low 133 ALIGNMENT 143 YS2-1k18.p1k chr02 714 975 1990 2250 F 262 86.26 1160 reject_low 70 ALIGNMENT 83 YS2-1k18.p1k chr12 979 750 1069798 1070026 C 230 80.00 1160|0,10 reject_low 299 ALIGNMENT 0 YS2-1k18.p1k chr10 62 713 1705 1704 F 652 0.00 1160 reject_low 104 ALIGNMENT 371 YS2-1k18.q1k chr08 426 29 3743 4140 C 398 97.99 1393 reject_low 11 ALIGNMENT 0 YS2-1k18.p1k chr09 62 714 2239 2238 F 653 0.00 1160 reject_low 308 ALIGNMENT 0 YS2-1k18.p1k chr04 907 888 1530065 1530064 C 20 0.00 1160 reject_low 190 ALIGNMENT 784 YS2-1k18.p1k chr16 960 36 946249 947172 C 925 95.35 1160 reject_low 15 ALIGNMENT 0 YS2-1k18.p1k chr16 62 716 1630 1629 F 655 0.00 1160 reject_low 23 ALIGNMENT 108 YS2-1k18.p1k chr05 714 964 1506 1755 F 251 82.47 1160 reject_low 142 ALIGNMENT 83 YS2-1k18.p1k chr15 979 750 1089425 1089653 C 230 80.00 1160 reject_low 165 ALIGNMENT 73 YS2-1k18.p1k chr05 787 960 1470 1643 F 174 81.61 1160 reject_low 193 ALIGNMENT 32 YS2-1k18.p1k chr05 768 713 574903 574958 C 56 87.50 1160 reject_low 276 ALIGNMENT 41 YS2-1k18.p1k chr15 964 895 1089584 1089653 C 70 87.14 1160 reject_low 259 ALIGNMENT 32 YS2-1k18.p1k chr12 713 768 7685 7740 F 56 87.50 1160 reject_low 279 ALIGNMENT 127 YS2-1k18.p1k chr07 923 725 1088970 1089167 C 199 89.45 1160 reject_low 118 ALIGNMENT 43 YS2-1k18.p1k chr15 851 714 1089229 1089365 C 138 78.99 1160 reject_low 246 ALIGNMENT 0 YS2-1k18.p1k chr12 760 759 2197 7335 F 0 0.00 1160 reject_low 298 ALIGNMENT 0 YS2-1k18.p1k chr12 62 786 1683 1682 F 725 0.00 1160 reject_low 151 ALIGNMENT 0 YS2-1k18.p1k chr05 724 62 575091 575090 C 663 0.00 1160 reject_low 117 ALIGNMENT 131 YS2-1k18.p1k chr02 725 979 2073 2326 F 255 85.10 1160 reject_low 105 ALIGNMENT 0 YS2-1k18.p1k chr16 712 62 946136 946135 C 651 0.00 1160 reject_low 189 ALIGNMENT 55 YS2-1k18.p1k chr12 960 834 1069889 1070015 C 127 81.89 1160|0,9 reject_low 304 ALIGNMENT 0 YS2-1k18.p1k chr08 62 833 1662 1661 F 772 0.00 1160 reject_low 182 ALIGNMENT 0 YS2-1k18.p1k chr09 62 713 2046 2045 F 652 0.00 1160 reject_low 69 ALIGNMENT 83 YS2-1k18.p1k chr16 750 979 1483 1711 F 230 80.00 1160 reject_low 166 ALIGNMENT 810 YS2-1k18.p1k chr12 979 36 1069762 1070704 C 944 95.66 1160 reject_low 10 ALIGNMENT 0 YS2-1k18.p1k chr12 833 62 1076679 1076678 C 772 0.00 1160 reject_low 212 ALIGNMENT 0 YS2-1k18.p1k chr04 712 62 1530130 1530129 C 651 0.00 1160 reject_low 275 ALIGNMENT 64 YS2-1k18.p1k chr09 834 975 1697 1838 F 142 82.39 1160 reject_low 199 ALIGNMENT 0 YS2-1k18.p1k chr10 62 713 1849 1848 F 652 0.00 1160 reject_low 110 ALIGNMENT 0 YS2-1k18.p1k chr05 62 941 1481 1480 F 880 0.00 1160 reject_low 293 ALIGNMENT 131 YS2-1k18.p1k chr10 714 975 1705 1965 F 262 84.73 1160 reject_low 104 ALIGNMENT 46 YS2-1k18.p1k chr12 714 851 2079 2215 F 138 79.71 1160|0,9 reject_low 303 ALIGNMENT 73 YS2-1k18.p1k chr13 713 887 1918 2091 F 175 82.29 1160 reject_low 186 ALIGNMENT 31 YS2-1k18.p1k chr09 895 960 1686 1751 F 66 83.33 1160 reject_low 289 ALIGNMENT 0 YS2-1k18.p1k chr07 713 62 1089107 1089106 C 652 0.00 1160 reject_low 236 ALIGNMENT 0 YS2-1k18.p1k chr12 62 712 7577 7576 F 651 0.00 1160 reject_low 185 ALIGNMENT 191 YS2-1k18.p1k chr02 725 1134 2145 2566 F 410 83.41 1160 reject_low 32 ALIGNMENT 0 YS2-1k18.p1k chr09 62 724 2165 2164 F 663 0.00 1160 reject_low 242 ALIGNMENT 32 YS2-1k18.p1k chr14 713 768 1933 1988 F 56 87.50 1160 reject_low 282 ALIGNMENT 371 YS2-1k18.q1k chr12 426 29 9546 9943 C 398 97.99 1393 reject_low 13 ALIGNMENT 0 YS2-1k18.p1k chr15 713 62 1089618 1089617 C 652 0.00 1160 reject_low 83 ALIGNMENT 0 YS2-1k18.p1k chr05 869 62 575307 575306 C 808 0.00 1160 reject_low 225 ALIGNMENT 0 YS2-1k18.p1k chr04 869 62 1530478 1530477 C 808 0.00 1160 reject_low 224 ALIGNMENT 124 YS2-1k18.p1k chr12 923 725 1069602 1069799 C 199 88.94 1160 reject_low 129 ALIGNMENT 0 YS2-1k18.p1k chr08 724 62 560615 560614 C 663 0.00 1160 reject_low 95 ALIGNMENT 0 YS2-1k18.p1k chr05 907 794 574916 574915 C 114 0.00 1160 reject_low 264 ALIGNMENT 0 YS2-1k18.p1k chr12 62 713 7362 7361 F 652 0.00 1160 reject_low 78 ALIGNMENT 213 YS2-1k18.p1k chr16 717 1134 1630 2059 F 418 84.93 1160 reject_low 23 ALIGNMENT 142 YS2-1k18.p1k chr02 725 923 2217 2414 F 199 91.96 1160 reject_low 94 ALIGNMENT 0 YS2-1k18.p1k chr09 872 907 2382 2381 F 36 0.00 1160 reject_low 308 ALIGNMENT 30 YS2-1k18.p1k chr08 768 725 560427 560470 C 44 90.91 1160 reject_low 292 ALIGNMENT 131 YS2-1k18.p1k chr10 725 979 1932 2185 F 255 85.10 1160 reject_low 107 ALIGNMENT 0 YS2-1k18.p1k chr14 888 907 1998 1997 F 20 0.00 1160 reject_low 187 ALIGNMENT 83 YS2-1k18.p1k chr07 979 750 1089166 1089394 C 230 80.00 1160 reject_low 160 ALIGNMENT 103 YS2-1k18.p1k chr05 714 981 1722 1988 F 268 80.97 1160 reject_low 140 ALIGNMENT 55 YS2-1k18.p1k chr15 960 834 1089516 1089642 C 127 81.89 1160 reject_low 215 ALIGNMENT 137 YS2-1k18.p1k chr16 714 975 1519 1779 F 262 85.50 1160 reject_low 84 ALIGNMENT 135 YS2-1k18.p1k chr12 714 979 7398 7662 F 266 84.96 1160 reject_low 88 ALIGNMENT 0 YS2-1k18.p1k chr14 852 907 1998 1997 F 56 0.00 1160 reject_low 239 ALIGNMENT 0 YS2-1k18.p1k chr12 724 62 1069800 1069799 C 663 0.00 1160 reject_low 129 ALIGNMENT 79 YS2-1k18.p1k chr10 787 960 1669 1842 F 174 82.76 1160 reject_low 176 ALIGNMENT 0 YS2-1k18.p1k chr10 62 713 1813 1812 F 652 0.00 1160 reject_low 97 ALIGNMENT 0 YS2-1k18.p1k chr02 62 713 1558 1557 F 652 0.00 1160 reject_low 85 ALIGNMENT 0 YS2-1k18.p1k chr12 62 869 1694 1693 F 808 0.00 1160 reject_low 218 ALIGNMENT 0 YS2-1k18.p1k chr13 62 749 1667 1666 F 688 0.00 1160 reject_low 163 ALIGNMENT 141 YS2-1k18.p1k chr02 714 979 1630 1894 F 266 85.71 1160 reject_low 71 ALIGNMENT 0 YS2-1k18.p1k chr12 716 62 1069916 1069915 C 655 0.00 1160 reject_low 45 ALIGNMENT 0 YS2-1k18.p1k chr05 716 62 575171 575170 C 655 0.00 1160 reject_low 19 ALIGNMENT 0 YS2-1k18.p1k chr02 62 724 1677 1676 F 663 0.00 1160 reject_low 57 ALIGNMENT 127 YS2-1k18.p1k chr12 725 923 2018 2215 F 199 89.45 1160 reject_low 119 ALIGNMENT 0 YS2-1k18.p1k chr14 62 869 1585 1584 F 808 0.00 1160 reject_low 231 ALIGNMENT 0 YS2-1k18.p1k chr15 716 62 1089507 1089506 C 655 0.00 1160 reject_low 30 ALIGNMENT 127 YS2-1k18.p1k chr02 713 979 1953 2218 F 267 83.90 1160 reject_low 108 ALIGNMENT 0 YS2-1k18.p1k chr16 907 872 946051 946050 C 36 0.00 1160 reject_low 168 ALIGNMENT 48 YS2-1k18.p1k chr06 713 903 1072 1261 F 191 76.44 1160 reject_low 221 ALIGNMENT 0 YS2-1k18.p1k chr05 713 62 575246 575245 C 652 0.00 1160 reject_low 86 ALIGNMENT 807 YS2-1k18.p1k chr13 36 979 989 1931 F 944 95.55 1160 reject_low 12 ALIGNMENT 0 YS2-1k18.p1k chr12 62 724 7553 7552 F 663 0.00 1160 reject_low 120 ALIGNMENT 48 YS2-1k18.p1k chr06 725 943 1048 1265 F 219 75.34 1160 reject_low 234 ALIGNMENT 0 YS2-1k18.p1k chr12 786 62 1076690 1076689 C 725 0.00 1160 reject_low 177 ALIGNMENT 371 YS2-1k18.q1k chr12 426 29 4011 4408 C 398 97.99 1393 reject_low 16 ALIGNMENT 55 YS2-1k18.p1k chr14 834 960 1585 1711 F 127 81.89 1160 reject_low 214 ALIGNMENT 137 YS2-1k18.p1k chr12 975 714 1076393 1076653 C 262 85.50 1160 reject_low 80 ALIGNMENT 0 YS2-1k18.p1k chr02 62 713 2242 2241 F 652 0.00 1160 reject_low 169 ALIGNMENT 83 YS2-1k18.p1k chr12 979 750 1076461 1076689 C 230 80.00 1160 reject_low 162 ALIGNMENT 0 YS2-1k18.p1k chr16 786 62 946495 946494 C 725 0.00 1160 reject_low 152 ALIGNMENT 122 YS2-1k18.p1k chr16 975 714 946090 946350 C 262 83.59 1160 reject_low 116 ALIGNMENT 0 YS2-1k18.p1k chr05 716 62 575207 575206 C 655 0.00 1160 reject_low 38 ALIGNMENT 0 YS2-1k18.p1k chr05 62 713 1614 1613 F 652 0.00 1160 reject_low 132 ALIGNMENT 0 YS2-1k18.p1k chr16 62 713 1555 1554 F 652 0.00 1160 reject_low 91 ALIGNMENT 0 YS2-1k18.p1k chr04 833 62 1530478 1530477 C 772 0.00 1160 reject_low 208 ALIGNMENT 0 YS2-1k18.p1k chr05 907 888 574894 574893 C 20 0.00 1160 reject_low 183 ALIGNMENT 0 YS2-1k18.p1k chr09 62 894 1686 1685 F 833 0.00 1160 reject_low 289 ALIGNMENT 213 YS2-1k18.p1k chr14 717 1134 1721 2150 F 418 84.93 1160 reject_low 22 ALIGNMENT 0 YS2-1k18.p1k chr05 62 713 1578 1577 F 652 0.00 1160 reject_low 115 ALIGNMENT 150 YS2-1k18.p1k chr12 714 979 1755 2019 F 266 86.84 1160 reject_low 61 ALIGNMENT 0 YS2-1k18.p1k chr08 62 712 1866 1865 F 651 0.00 1160 reject_low 278 ALIGNMENT 0 YS2-1k18.p1k chr02 62 712 1845 1844 F 651 0.00 1160 reject_low 67 ALIGNMENT 65 YS2-1k18.p1k chr08 714 893 1759 1937 F 180 80.56 1160 reject_low 198 ALIGNMENT 0 YS2-1k18.p1k chr12 712 62 1076439 1076438 C 651 0.00 1160 reject_low 300 ALIGNMENT 0 YS2-1k18.p1k chr02 62 724 2325 2324 F 663 0.00 1160 reject_low 287 ALIGNMENT 0 YS2-1k18.p1k chr08 713 62 560590 560589 C 652 0.00 1160 reject_low 170 ALIGNMENT 0 YS2-1k18.p1k chr05 712 62 575067 575066 C 651 0.00 1160 reject_low 183 ALIGNMENT 0 YS2-1k18.p1k chr08 749 62 560842 560841 C 688 0.00 1160 reject_low 161 ALIGNMENT 55 YS2-1k18.p1k chr07 960 834 1089257 1089383 C 127 81.89 1160 reject_low 210 ALIGNMENT 0 YS2-1k18.p1k chr15 712 62 1089295 1089294 C 651 0.00 1160 reject_low 283 ALIGNMENT 0 YS2-1k18.p1k chr07 749 62 1089395 1089394 C 688 0.00 1160 reject_low 160 ALIGNMENT 39 YS2-1k18.p1k chr04 793 725 1530086 1530153 C 69 88.41 1160 reject_low 263 ALIGNMENT 32 YS2-1k18.p1k chr12 713 768 2150 2205 F 56 87.50 1160|0,9 reject_low 298 ALIGNMENT 0 YS2-1k18.p1k chr09 62 713 1722 1721 F 652 0.00 1160 reject_low 103 ALIGNMENT 165 YS2-1k18.p1k chr02 714 979 2098 2362 F 266 88.72 1160 reject_low 52 ALIGNMENT 810 YS2-1k18.p1k chr07 979 36 1089130 1090072 C 944 95.66 1160 ambiguous_tel 0 ALIGNMENT 73 YS2-1k18.p1k chr12 713 887 7577 7750 F 175 82.29 1160 reject_low 185 ALIGNMENT 209 YS2-1k18.p1k chr05 725 1134 1805 2214 F 410 84.63 1160 reject_low 24 ALIGNMENT 49 YS2-1k18.p1k chr12 870 960 7337 7427 F 91 85.71 1160|9,0 reject_low 297 ALIGNMENT 0 YS2-1k18.p1k chr08 724 62 560471 560470 C 663 0.00 1160 reject_low 292 ALIGNMENT 0 YS2-1k18.p1k chr10 62 708 1880 1879 F 647 0.00 1160 reject_low 55 ALIGNMENT 186 YS2-1k18.p1k chr09 714 1134 2118 2538 F 421 82.42 1160 reject_low 34 ALIGNMENT 0 YS2-1k18.p1k chr16 907 852 945963 945962 C 56 0.00 1160 reject_low 241 ALIGNMENT 0 YS2-1k18.p1k chr06 62 714 1122 1121 F 653 0.00 1160 reject_low 307 ALIGNMENT 0 YS2-1k18.p1k chr05 907 769 574904 574903 C 139 0.00 1160 reject_low 276 ALIGNMENT 0 YS2-1k18.p1k chr08 833 62 560831 560830 C 772 0.00 1160 reject_low 211 ALIGNMENT 0 YS2-1k18.p1k chr08 62 724 1842 1841 F 663 0.00 1160 reject_low 286 ALIGNMENT 56 YS2-1k18.p1k chr09 870 975 1697 1802 F 106 84.91 1160 reject_low 203 ALIGNMENT 49 YS2-1k18.p1k chr08 870 960 1662 1752 F 91 85.71 1160 reject_low 227 ALIGNMENT 0 YS2-1k18.p1k chr08 907 769 560428 560427 C 139 0.00 1160 reject_low 292 ALIGNMENT 79 YS2-1k18.p1k chr14 787 960 1574 1747 F 174 82.76 1160 reject_low 179 ALIGNMENT 79 YS2-1k18.p1k chr09 787 960 1686 1859 F 174 82.76 1160 reject_low 175 ALIGNMENT 0 YS2-1k18.p1k chr07 713 62 1089323 1089322 C 652 0.00 1160 reject_low 87 ALIGNMENT 0 YS2-1k18.p1k chr10 62 713 1957 1956 F 652 0.00 1160 reject_low 74 ALIGNMENT 79 YS2-1k18.p1k chr16 787 960 1483 1656 F 174 82.76 1160 reject_low 181 ALIGNMENT 135 YS2-1k18.p1k chr07 979 714 1089058 1089322 C 266 84.96 1160 reject_low 87 ALIGNMENT 0 YS2-1k18.p1k chr16 794 907 1885 1884 F 114 0.00 1160 reject_low 272 ALIGNMENT 808 YS2-1k18.p1k chr05 36 960 792 1715 F 925 96.22 1160 reject_low 9 ALIGNMENT 0 YS2-1k18.p1k chr10 62 724 1932 1931 F 663 0.00 1160 reject_low 107 ALIGNMENT 0 YS2-1k18.p1k chr05 62 724 1877 1876 F 663 0.00 1160 reject_low 205 ALIGNMENT 0 YS2-1k18.p1k chr14 62 713 1862 1861 F 652 0.00 1160 reject_low 239 ALIGNMENT 73 YS2-1k18.p1k chr16 713 887 1734 1907 F 175 82.29 1160 reject_low 188 ALIGNMENT 0 YS2-1k18.p1k chr02 62 716 1597 1596 F 655 0.00 1160 reject_low 126 ALIGNMENT 0 YS2-1k18.p1k chr10 62 712 2172 2171 F 651 0.00 1160 reject_low 274 ALIGNMENT 45 YS2-1k18.p1k chr09 725 943 2165 2382 F 219 74.89 1160 reject_low 242 ALIGNMENT 0 YS2-1k18.p1k chr12 724 62 1076355 1076354 C 663 0.00 1160 reject_low 302,306 ALIGNMENT 64 YS2-1k18.p1k chr10 834 975 1680 1821 F 142 82.39 1160 reject_low 200 ALIGNMENT 0 YS2-1k18.p1k chr16 62 894 1483 1482 F 833 0.00 1160 reject_low 260 ALIGNMENT 73 YS2-1k18.p1k chr05 887 713 574893 575066 C 175 82.29 1160 reject_low 183 ALIGNMENT 0 YS2-1k18.p1k chr16 62 869 1494 1493 F 808 0.00 1160 reject_low 233 ALIGNMENT 0 YS2-1k18.p1k chr02 62 749 1486 1485 F 688 0.00 1160 reject_low 147 ALIGNMENT 43 YS2-1k18.p1k chr16 960 895 946429 946494 C 66 89.39 1160 reject_low 249 ALIGNMENT 102 YS2-1k18.p1k chr10 750 960 1669 1878 F 211 84.36 1160 reject_low 149 ALIGNMENT 142 YS2-1k18.p1k chr09 714 981 1974 2240 F 268 85.82 1160 reject_low 65 ALIGNMENT 114 YS2-1k18.p1k chr08 787 983 1651 1847 F 197 86.80 1160 reject_low 111 ALIGNMENT 0 YS2-1k18.p1k chr16 62 712 1734 1733 F 651 0.00 1160 reject_low 188 ALIGNMENT 0 YS2-1k18.p1k chr08 62 894 1651 1650 F 833 0.00 1160 reject_low 217 ALIGNMENT 0 YS2-1k18.p1k chr09 62 713 1974 1973 F 652 0.00 1160 reject_low 65 ALIGNMENT 195 YS2-1k18.p1k chr16 717 979 1594 1855 F 263 92.78 1160 reject_low 43 ALIGNMENT 0 YS2-1k18.q1k chr12 751 427 9547 9546 C 325 0.00 1393 reject_low 13 ALIGNMENT 189 YS2-1k18.p1k chr08 1134 717 560265 560694 C 418 83.01 1160 reject_low 33 ALIGNMENT 0 YS2-1k18.p1k chr04 894 62 1530489 1530488 C 833 0.00 1160 reject_low 252 ALIGNMENT 0 YS2-1k18.p1k chr04 907 769 1530075 1530074 C 139 0.00 1160 reject_low 275 ALIGNMENT 0 YS2-1k18.p1k chr12 749 62 1076690 1076689 C 688 0.00 1160 reject_low 162 ALIGNMENT 0 YS2-1k18.p1k chr13 62 712 1918 1917 F 651 0.00 1160 reject_low 186 ALIGNMENT 135 YS2-1k18.p1k chr14 714 979 1646 1910 F 266 84.96 1160 reject_low 90 ALIGNMENT 78 YS2-1k18.p1k chr02 714 887 2242 2414 F 174 83.33 1160 reject_low 169 ALIGNMENT 368 YS2-1k18.q1k chr06 424 29 3050 3446 C 396 97.98 1393 reject_low 18 ALIGNMENT 0 YS2-1k18.p1k chr05 894 62 575318 575317 C 833 0.00 1160 reject_low 253 ALIGNMENT 34 YS2-1k18.p1k chr09 801 871 2312 2382 F 71 83.10 1160 reject_low 308 ALIGNMENT 55 YS2-1k18.p1k chr08 960 834 560704 560830 C 127 81.89 1160 reject_low 211 ALIGNMENT 49 YS2-1k18.p1k chr04 960 870 1530387 1530477 C 91 85.71 1160 reject_low 224 ALIGNMENT 0 YS2-1k18.p1k chr12 724 62 1069692 1069691 C 663 0.00 1160 reject_low 268 ALIGNMENT 0 YS2-1k18.p1k chr05 833 62 575307 575306 C 772 0.00 1160 reject_low 209 ALIGNMENT 799 YS2-1k18.p1k chr08 975 36 560581 561519 C 940 95.43 1160 reject_low 14 ALIGNMENT 81 YS2-1k18.p1k chr10 714 856 2065 2206 F 143 87.41 1160 reject_low 167 ALIGNMENT 0 YS2-1k18.p1k chr07 716 62 1089284 1089283 C 655 0.00 1160 reject_low 39 ALIGNMENT 195 YS2-1k18.p1k chr06 714 1134 1001 1421 F 421 83.14 1160 reject_low 31 ALIGNMENT 0 YS2-1k18.q1k chr08 427 751 558619 558618 F 325 0.00 1393 reject_low 14 ALIGNMENT 137 YS2-1k18.p1k chr07 975 714 1089098 1089358 C 262 85.50 1160 reject_low 77 ALIGNMENT 127 YS2-1k18.p1k chr16 725 923 1710 1907 F 199 89.45 1160 reject_low 123 ALIGNMENT 0 YS2-1k18.p1k chr16 713 62 946423 946422 C 652 0.00 1160 reject_low 59 ALIGNMENT 0 YS2-1k18.p1k chr05 62 869 1481 1480 F 808 0.00 1160 reject_low 250 ALIGNMENT 0 YS2-1k18.p1k chr04 716 62 1530342 1530341 C 655 0.00 1160 reject_low 27 ALIGNMENT 801 YS2-1k18.p1k chr09 36 979 1008 1950 F 944 95.34 1160 reject_low 6 ALIGNMENT 0 YS2-1k18.p1k chr14 62 713 1646 1645 F 652 0.00 1160 reject_low 90 ALIGNMENT 587 YS2-1k18.q1k chr12 29 803 1066353 1067095 F 775 93.68 1393 reject_low 10 ALIGNMENT 0 YS2-1k18.p1k chr05 907 852 574894 574893 C 56 0.00 1160 reject_low 235 ALIGNMENT 0 YS2-1k18.p1k chr16 769 907 1897 1896 F 139 0.00 1160 reject_low 284 ALIGNMENT 127 YS2-1k18.p1k chr14 725 923 1801 1998 F 199 89.45 1160 reject_low 122 ALIGNMENT 132 YS2-1k18.p1k chr15 979 714 1089317 1089581 C 266 84.59 1160 reject_low 102 ALIGNMENT 0 YS2-1k18.p1k chr02 62 713 1522 1521 F 652 0.00 1160 reject_low 64 ALIGNMENT 0 YS2-1k18.p1k chr02 62 724 1821 1820 F 663 0.00 1160 reject_low 143 ALIGNMENT 0 YS2-1k18.p1k chr14 62 716 1721 1720 F 655 0.00 1160 reject_low 22 ALIGNMENT 371 YS2-1k18.q1k chr13 426 29 3887 4284 C 398 97.99 1393 reject_low 12 ALIGNMENT 0 YS2-1k18.p1k chr15 907 888 1089230 1089229 C 20 0.00 1160 reject_low 192 ALIGNMENT 0 YS2-1k18.p1k chr16 888 907 1907 1906 F 20 0.00 1160 reject_low 188 ALIGNMENT 79 YS2-1k18.p1k chr13 787 960 1667 1840 F 174 82.76 1160 reject_low 178 ALIGNMENT 43 YS2-1k18.p1k chr05 895 960 1470 1535 F 66 89.39 1160 reject_low 247 ALIGNMENT 0 YS2-1k18.p1k chr05 872 907 2058 2057 F 36 0.00 1160 reject_low 206 ALIGNMENT 33 YS2-1k18.p1k chr02 725 793 2325 2392 F 69 85.51 1160 reject_low 287 ALIGNMENT 0 YS2-1k18.p1k chr08 713 62 560770 560769 C 652 0.00 1160 reject_low 63 ALIGNMENT 39 YS2-1k18.p1k chr13 725 793 2002 2069 F 69 88.41 1160 reject_low 269 ALIGNMENT 41 YS2-1k18.p1k chr13 895 964 1667 1736 F 70 87.14 1160 reject_low 257 ALIGNMENT 760 YS2-1k18.p1k chr02 36 960 808 1731 F 925 94.49 1160 reject_low 17 ALIGNMENT 843 YS2-1k18.q1k chr10 1179 29 4581 5730 C 1151 92.01 1393 ambiguous_tel 2 ALIGNMENT 0 YS2-1k18.p1k chr16 749 62 946495 946494 C 688 0.00 1160 reject_low 141 ALIGNMENT 0 YS2-1k18.p1k chr12 852 907 7750 7749 F 56 0.00 1160 reject_low 237 ALIGNMENT 0 YS2-1k18.p1k chr10 62 713 2065 2064 F 652 0.00 1160 reject_low 167 ALIGNMENT 146 YS2-1k18.p1k chr10 709 979 1880 2149 F 271 85.98 1160 reject_low 55 ALIGNMENT 0 YS2-1k18.p1k chr07 907 794 1088993 1088992 C 114 0.00 1160 reject_low 265 ALIGNMENT 103 YS2-1k18.p1k chr02 709 960 1769 2019 F 252 81.75 1160 reject_low 137 ALIGNMENT 20 YS2-1k18.p1k chr08 942 964 1662 1684 F 23 95.65 1160 reject_low 294 ALIGNMENT 56 YS2-1k18.p1k chr06 895 979 893 977 F 85 89.41 1160 reject_low 201 ALIGNMENT 0 YS2-1k18.p1k chr08 907 794 560440 560439 C 114 0.00 1160 reject_low 288 ALIGNMENT 0 YS2-1k18.p1k chr12 794 894 2194 7325 F 101 0.00 1160 reject_low 305 ALIGNMENT 0 YS2-1k18.p1k chr16 852 907 1907 1906 F 56 0.00 1160 reject_low 240 ALIGNMENT 46 YS2-1k18.p1k chr16 851 714 945962 946098 C 138 79.71 1160 reject_low 241 ALIGNMENT 137 YS2-1k18.p1k chr13 714 975 1703 1963 F 262 85.50 1160 reject_low 81 ALIGNMENT 0 YS2-1k18.p1k chr05 786 62 575318 575317 C 725 0.00 1160 reject_low 172 ALIGNMENT 49 YS2-1k18.p1k chr13 870 960 1678 1768 F 91 85.71 1160 reject_low 230 ALIGNMENT 46 YS2-1k18.p1k chr13 714 851 1955 2091 F 138 79.71 1160 reject_low 238 ALIGNMENT 0 YS2-1k18.p1k chr14 794 907 1976 1975 F 114 0.00 1160 reject_low 270 ALIGNMENT 0 YS2-1k18.p1k chr16 713 62 946099 946098 C 652 0.00 1160 reject_low 241 ALIGNMENT 181 YS2-1k18.p1k chr09 714 960 1794 2039 F 247 92.71 1160 reject_low 48 ALIGNMENT 32 YS2-1k18.p1k chr08 713 768 1866 1921 F 56 87.50 1160 reject_low 278 ALIGNMENT 73 YS2-1k18.p1k chr12 713 887 2042 2215 F 175 82.29 1160|0,9 reject_low 297 ALIGNMENT 46 YS2-1k18.p1k chr14 714 851 1862 1998 F 138 79.71 1160 reject_low 239 ALIGNMENT 132 YS2-1k18.p1k chr12 979 714 1069690 1069954 C 266 84.59 1160 reject_low 100 ALIGNMENT 39 YS2-1k18.p1k chr14 725 793 1909 1976 F 69 88.41 1160 reject_low 270 ALIGNMENT 119 YS2-1k18.p1k chr12 714 975 1827 2087 F 262 83.21 1160 reject_low 127 ALIGNMENT 0 YS2-1k18.p1k chr07 716 62 1089248 1089247 C 655 0.00 1160 reject_low 20 ALIGNMENT 83 YS2-1k18.p1k chr13 750 979 1667 1895 F 230 80.00 1160 reject_low 163 ALIGNMENT 0 YS2-1k18.p1k chr12 713 62 1069991 1069990 C 652 0.00 1160 reject_low 79 ALIGNMENT 201 YS2-1k18.p1k chr16 979 714 946014 946278 C 266 93.23 1160 reject_low 36 ALIGNMENT 0 YS2-1k18.p1k chr07 869 62 1089384 1089383 C 808 0.00 1160 reject_low 226 ALIGNMENT 0 YS2-1k18.p1k chr16 62 833 1494 1493 F 772 0.00 1160 reject_low 216 ALIGNMENT 74 YS2-1k18.p1k chr08 834 979 1662 1807 F 146 84.25 1160 reject_low 182 ALIGNMENT 0 YS2-1k18.p1k chr06 62 929 892 891 F 868 0.00 1160 reject_low 243 ALIGNMENT 810 YS2-1k18.p1k chr12 979 36 1076425 1077367 C 944 95.66 1160 reject_low 7 ALIGNMENT 0 YS2-1k18.p1k chr16 713 62 946279 946278 C 652 0.00 1160 reject_low 36 ALIGNMENT 0 YS2-1k18.p1k chr07 833 62 1089384 1089383 C 772 0.00 1160 reject_low 210 ALIGNMENT 135 YS2-1k18.p1k chr13 714 979 1739 2003 F 266 84.96 1160 reject_low 89 ALIGNMENT 41 YS2-1k18.p1k chr14 895 964 1574 1643 F 70 87.14 1160 reject_low 258 ALIGNMENT 120 YS2-1k18.p1k chr02 717 979 1597 1858 F 263 83.27 1160 reject_low 126 ALIGNMENT 0 YS2-1k18.p1k chr13 62 869 1678 1677 F 808 0.00 1160 reject_low 230 ALIGNMENT 810 YS2-1k18.p1k chr05 979 36 575053 575995 C 944 95.66 1160 reject_low 8 ALIGNMENT 0 YS2-1k18.p1k chr13 62 833 1678 1677 F 772 0.00 1160 reject_low 213 ALIGNMENT 37 YS2-1k18.p1k chr06 930 979 892 941 F 50 92.00 1160 reject_low 243 ALIGNMENT 98 YS2-1k18.p1k chr08 750 979 1651 1879 F 230 82.17 1160 reject_low 146 ALIGNMENT 143 YS2-1k18.p1k chr12 725 979 1874 2127 F 255 86.67 1160 reject_low 73 ALIGNMENT 0 YS2-1k18.p1k chr12 794 907 7728 7727 F 114 0.00 1160 reject_low 267 ALIGNMENT 0 YS2-1k18.p1k chr05 62 712 1901 1900 F 651 0.00 1160 reject_low 206 ALIGNMENT 33 YS2-1k18.p1k chr08 793 725 560439 560506 C 69 85.51 1160 reject_low 288 ALIGNMENT 41 YS2-1k18.p1k chr05 964 895 575248 575317 C 70 87.14 1160 reject_low 253 ALIGNMENT 0 YS2-1k18.p1k chr09 62 713 1758 1757 F 652 0.00 1160 reject_low 133 ALIGNMENT 41 YS2-1k18.p1k chr08 964 895 560772 560841 C 70 87.14 1160 reject_low 255 ALIGNMENT 0 YS2-1k18.p1k chr02 62 708 1769 1768 F 647 0.00 1160 reject_low 137 ALIGNMENT 59 YS2-1k18.p1k chr05 725 903 1877 2054 F 179 79.33 1160 reject_low 205 ALIGNMENT 872 YS2-1k18.p1k chr08 36 1134 973 2095 F 1099 93.72 1160 reject_low 11 ALIGNMENT 0 YS2-1k18.p1k chr12 62 712 7685 7684 F 651 0.00 1160 reject_low 279 ALIGNMENT 0 YS2-1k18.p1k chr06 62 857 892 891 F 796 0.00 1160 reject_low 195 ALIGNMENT 0 YS2-1k18.p1k chr15 749 62 1089654 1089653 C 688 0.00 1160 reject_low 165 ALIGNMENT 0 YS2-1k18.p1k chr16 62 713 1771 1770 F 652 0.00 1160 reject_low 240 ALIGNMENT 0 YS2-1k18.p1k chr16 724 62 946160 946159 C 663 0.00 1160 reject_low 124 ALIGNMENT 0 YS2-1k18.p1k chr12 712 62 1076331 1076330 C 651 0.00 1160 reject_low 299 ALIGNMENT 213 YS2-1k18.p1k chr13 717 1134 1814 2243 F 418 84.93 1160 reject_low 21 ALIGNMENT 0 YS2-1k18.p1k chr15 907 769 1089240 1089239 C 139 0.00 1160 reject_low 283 ALIGNMENT 0 YS2-1k18.p1k chr10 62 833 1680 1679 F 772 0.00 1160 reject_low 200 ALIGNMENT 0 YS2-1k18.p1k chr06 62 894 893 892 F 833 0.00 1160 reject_low 201 ALIGNMENT 0 YS2-1k18.p1k chr15 713 62 1089582 1089581 C 652 0.00 1160 reject_low 102 ALIGNMENT 55 YS2-1k18.p1k chr12 960 834 1076552 1076678 C 127 81.89 1160 reject_low 212 ALIGNMENT 50 YS2-1k18.p1k chr16 975 870 946378 946483 C 106 83.02 1160 reject_low 219 ALIGNMENT 151 YS2-1k18.p1k chr02 714 960 1522 1767 F 247 88.66 1160 reject_low 64 ALIGNMENT 210 YS2-1k18.p1k chr12 717 1134 7473 7902 F 418 84.69 1160 reject_low 26 ALIGNMENT 0 YS2-1k18.p1k chr12 713 62 1076654 1076653 C 652 0.00 1160 reject_low 80 ALIGNMENT 46 YS2-1k18.p1k chr16 714 851 1771 1907 F 138 79.71 1160 reject_low 240 ALIGNMENT 0 YS2-1k18.p1k chr12 712 62 1069776 1069775 C 651 0.00 1160 reject_low 191 ALIGNMENT 134 YS2-1k18.p1k chr09 714 975 1830 2090 F 262 85.11 1160 reject_low 96 ALIGNMENT 0 YS2-1k18.q1k chr08 751 427 3744 3743 C 325 0.00 1393 reject_low 11 ALIGNMENT 0 YS2-1k18.p1k chr12 907 769 1069613 1069612 C 139 0.00 1160 reject_low 280 ALIGNMENT 0 YS2-1k18.p1k chr06 62 724 940 939 F 663 0.00 1160 reject_low 112 ALIGNMENT 0 YS2-1k18.p1k chr13 62 712 2026 2025 F 651 0.00 1160 reject_low 281 ALIGNMENT 0 YS2-1k18.p1k chr09 62 749 1686 1685 F 688 0.00 1160 reject_low 148 ALIGNMENT 0 YS2-1k18.p1k chr14 62 724 1801 1800 F 663 0.00 1160 reject_low 122 ALIGNMENT 0 YS2-1k18.p1k chr12 62 724 2018 2017 F 663 0.00 1160 reject_low 119 ALIGNMENT 0 YS2-1k18.p1k chr15 786 62 1089654 1089653 C 725 0.00 1160 reject_low 180 ALIGNMENT 0 YS2-1k18.p1k chr08 62 749 1651 1650 F 688 0.00 1160 reject_low 146 ALIGNMENT 0 YS2-1k18.p1k chr02 62 713 1738 1737 F 652 0.00 1160 reject_low 51 ALIGNMENT 55 YS2-1k18.p1k chr04 960 834 1530351 1530477 C 127 81.89 1160 reject_low 208 ALIGNMENT 0 YS2-1k18.p1k chr12 62 716 7437 7436 F 655 0.00 1160 reject_low 40 ALIGNMENT 78 YS2-1k18.p1k chr08 887 714 560417 560589 C 174 83.33 1160 reject_low 170 ALIGNMENT 0 YS2-1k18.p1k chr15 724 62 1089427 1089426 C 663 0.00 1160 reject_low 131 ALIGNMENT 463 YS2-1k20.p1k chr14 141 753 509235 509827 F 613 94.45 1074 accept 0 ALIGNMENT 803 YS2-1k20.q1k chr14 1124 35 512850 513932 C 1090 93.49 1407 accept 0 ALIGNMENT 270 YS2-1k23.p1k chr08 301 32 540732 541001 C 270 100.00 308 ambiguous_tel 0 ALIGNMENT 264 YS2-1k23.p1k chr01 301 32 220121 220390 C 270 99.26 308 ambiguous_tel 1 ALIGNMENT 416 YS2-1k24.p1k chr12 212 850 463318 463957 F 639 89.20 1161 reject_low 2 ALIGNMENT 577 YS2-1k24.q1k chr12 922 51 457831 458687 C 872 90.25 1294 reject_low 1 ALIGNMENT 417 YS2-1k24.p1k chr12 212 805 454181 454776 F 594 90.74 1161 accept 0 ALIGNMENT 581 YS2-1k24.q1k chr12 996 51 466896 467824 C 946 88.79 1294 accept 0 ALIGNMENT 0 YS2-1l01.q1k vc_5 218 62 5064 5063 C 157 0.00 257 reject_low 7 ALIGNMENT 40 YS2-1l01.q1k vc_2 257 218 2105 2144 C 40 100.00 257 reject_low 4 ALIGNMENT 150 YS2-1l01.p1k chr12 205 31 468168 468342 C 175 98.29 223 accept 0 ALIGNMENT 0 YS2-1l01.q1k vc_2 217 62 2145 2144 C 156 0.00 257 reject_low 4 ALIGNMENT 39 YS2-1l01.q1k vc_5 257 219 5025 5063 C 39 100.00 257 reject_low 7 ALIGNMENT 40 YS2-1l01.q1k vc_3 257 218 2472 2511 C 40 100.00 257 reject_low 5 ALIGNMENT 36 YS2-1l01.q1k vc_5 254 219 1 36 C 36 100.00 257 reject_low 9 ALIGNMENT 0 YS2-1l01.q1k vc_4 62 217 5832 5831 F 156 0.00 257 reject_low 6 ALIGNMENT 40 YS2-1l01.q1k vc_1 257 218 2472 2511 C 40 100.00 257 reject_low 3 ALIGNMENT 0 YS2-1l01.p1k chr12 223 206 468169 468168 C 18 0.00 223 accept 0 ALIGNMENT 0 YS2-1l01.q1k vc_1 217 62 2512 2511 C 156 0.00 257 reject_low 3 ALIGNMENT 150 YS2-1l01.q1k chr12 38 217 468170 468348 F 180 97.78 257 reject_low 2 ALIGNMENT 0 YS2-1l01.q1k vc_7 62 219 13525 13524 F 158 0.00 257 reject_low 8 ALIGNMENT 0 YS2-1l01.p1k chr12 223 206 459032 459031 C 18 0.00 223 reject_low 1 ALIGNMENT 38 YS2-1l01.q1k vc_7 220 257 13525 13562 F 38 100.00 257 reject_low 8 ALIGNMENT 0 YS2-1l01.q1k vc_5 218 62 37 36 C 157 0.00 257 reject_low 9 ALIGNMENT 150 YS2-1l01.q1k chr12 38 217 459033 459211 F 180 97.78 257 accept 0 ALIGNMENT 40 YS2-1l01.q1k vc_4 218 257 5832 5871 F 40 100.00 257 reject_low 6 ALIGNMENT 0 YS2-1l01.q1k vc_3 217 62 2512 2511 C 156 0.00 257 reject_low 5 ALIGNMENT 0 YS2-1l01.q1k chr12 218 257 468348 468347 F 40 0.00 257 reject_low 2 ALIGNMENT 0 YS2-1l01.q1k chr12 218 257 459211 459210 F 40 0.00 257 accept 0 ALIGNMENT 150 YS2-1l01.p1k chr12 205 31 459031 459205 C 175 98.29 223 reject_low 1 ALIGNMENT 78 YS2-1l03.q1k chr16 34 185 485526 485674 F 152 85.53 1366 reject_low 1 ALIGNMENT 952 YS2-1l03.p1k chr07 37 1119 474417 475510 F 1083 96.95 1372 accept 0 ALIGNMENT 0 YS2-1l03.q1k chr16 186 733 485674 485673 F 548 0.00 1366 reject_low 1 ALIGNMENT 827 YS2-1l03.q1k chr07 1132 30 478972 480077 C 1103 94.11 1366 accept 0 ALIGNMENT 0 YS2-1l04.q1k vc_7 302 300 4700 4923 C 3 0.00 798 reject_vc 7 ALIGNMENT 277 YS2-1l04.q1k vc_3 1 299 2689 2989 F 299 97.99 798 reject_vc 6 ALIGNMENT 277 YS2-1l04.q1k vc_1 1 299 2689 2989 F 299 97.99 798 reject_vc 4 ALIGNMENT 223 YS2-1l04.q1k vc_7 299 53 4924 5172 C 247 97.17 798|0,1 reject_vc 7 ALIGNMENT 69 YS2-1l04.q1k vc_4 309 532 1882 2114 F 224 78.57 798 reject_vc 8 ALIGNMENT 0 YS2-1l04.q1k vc_4 237 62 113 112 C 176 0.00 798 reject_vc 9 ALIGNMENT 43 YS2-1l04.q1k vc_7 413 303 4587 4699 C 111 81.98 798 reject_vc 7 ALIGNMENT 277 YS2-1l04.q1k vc_2 1 299 2322 2622 F 299 97.99 798 reject_vc 5 ALIGNMENT 348 YS2-1l04.q1k vc_7 532 1 2027 2569 C 532 89.47 798 reject_vc 2 ALIGNMENT 47 YS2-1l04.q1k vc_4 299 238 49 112 C 62 93.55 798 reject_vc 9 ALIGNMENT 51 YS2-1l04.q1k vc_7 54 3 6360 6411 C 52 100.00 798|1,0 reject_vc 7 ALIGNMENT 0 YS2-1l04.q1k vc_4 300 308 1612 1881 F 9 0.00 798 reject_vc 8 ALIGNMENT 47 YS2-1l04.q1k vc_4 299 238 6276 6339 C 62 93.55 798 reject_vc 10 ALIGNMENT 313 YS2-1l04.q1k vc_4 413 1 5236 5654 C 413 92.74 798 reject_vc 3 ALIGNMENT 348 YS2-1l04.q1k vc_5 1 532 2556 3098 F 532 89.29 798 reject_vc 1 ALIGNMENT 312 YS2-1l04.p1k chr04 355 34 574272 574593 C 322 99.69 355 accept 0 ALIGNMENT 0 YS2-1l04.q1k vc_4 62 237 1548 1547 F 176 0.00 798 reject_vc 8 ALIGNMENT 47 YS2-1l04.q1k vc_4 238 299 1548 1611 F 62 93.55 798 reject_vc 8 ALIGNMENT 0 YS2-1l04.q1k vc_4 237 62 6340 6339 C 176 0.00 798 reject_vc 10 ALIGNMENT 0 YS2-1l04.q1k vc_7 53 54 5172 6360 C 0 0.00 798 reject_vc 7 ALIGNMENT 826 YS2-1l05.q1k chr08 1035 34 336066 337077 C 1002 95.11 1321 accept 0 ALIGNMENT 940 YS2-1l05.p1k chr08 35 1174 332534 333687 F 1140 95.09 1235 accept 0 ALIGNMENT 795 YS2-1l06.q1k chr05 919 30 401621 402506 C 890 97.53 1472 accept 0 ALIGNMENT 902 YS2-1l06.p1k chr05 33 1058 400704 401749 F 1026 96.59 1214 accept 0 ALIGNMENT 960 YS2-1l07.p1k chr05 33 1202 114787 115956 F 1170 95.64 1203 accept 0 ALIGNMENT 795 YS2-1l07.q1k chr05 1124 32 118906 120013 C 1093 91.77 1355 accept 0 ALIGNMENT 84 YS2-1l08.q1k vc_7 286 53 4950 5172 C 234 82.05 820|0,1 reject_vc 8 ALIGNMENT 139 YS2-1l08.q1k vc_1 1 286 2689 2963 F 286 85.66 820 reject_vc 4 ALIGNMENT 151 YS2-1l08.q1k vc_5 1 377 2556 2919 F 377 83.02 820 reject_vc 1 ALIGNMENT 20 YS2-1l08.q1k vc_4 320 377 1879 1935 F 58 79.31 820 reject_vc 7 ALIGNMENT 51 YS2-1l08.q1k vc_7 54 3 6360 6411 C 52 100.00 820|1,0 reject_vc 8 ALIGNMENT 139 YS2-1l08.q1k vc_2 1 286 2322 2596 F 286 85.66 820 reject_vc 5 ALIGNMENT 151 YS2-1l08.q1k vc_7 377 1 2206 2569 C 377 82.76 820 reject_vc 2 ALIGNMENT 352 YS2-1l08.p1k chr12 33 404 993572 993944 F 372 99.19 405 accept 0 ALIGNMENT 139 YS2-1l08.q1k vc_3 1 286 2689 2963 F 286 85.66 820 reject_vc 6 ALIGNMENT 144 YS2-1l08.q1k vc_4 377 1 5289 5654 C 377 82.23 820 reject_vc 3 ALIGNMENT 23 YS2-1l08.q1k vc_7 377 316 4640 4700 C 62 80.65 820 reject_vc 8 ALIGNMENT 0 YS2-1l08.q1k vc_7 53 54 5172 6360 C 0 0.00 820 reject_vc 8 ALIGNMENT 0 YS2-1l08.q1k vc_7 315 287 4701 4949 C 29 0.00 820 reject_vc 8 ALIGNMENT 877 YS2-1l10.q1k chr04 1131 35 1034610 1035712 C 1097 94.90 1355 accept 0 ALIGNMENT 869 YS2-1l10.p1k chr04 29 1045 1030581 1031617 F 1017 96.66 1286 accept 0 ALIGNMENT 928 YS2-1l11.p1k chr09 1113 33 110348 111445 C 1081 96.30 1290 accept 0 ALIGNMENT 849 YS2-1l11.q1k chr09 28 1019 105979 106970 F 992 96.47 1352 accept 0 ALIGNMENT 91 YS2-1l12.q1k chr01 384 159 206394 206618 C 226 80.53 1560 reject_low 24 ALIGNMENT 0 YS2-1l12.p1k chr01 62 650 204501 204500 F 589 0.00 1301 reject_low 68 ALIGNMENT 0 YS2-1l12.q1k chr01 122 158 13258 13257 F 37 0.00 1560 reject_low 6 ALIGNMENT 0 YS2-1l12.p1k chr01 656 62 26452 26451 C 595 0.00 1301 reject_low 54 ALIGNMENT 0 YS2-1l12.q1k chr08 151 122 527139 527138 C 30 0.00 1560 reject_low 17 ALIGNMENT 51 YS2-1l12.q1k chr08 251 159 526229 526321 C 93 84.95 1560 reject_low 47 ALIGNMENT 71 YS2-1l12.p1k chr01 657 1007 204912 205262 F 351 74.93 1301 reject_low 46 ALIGNMENT 25 YS2-1l12.q1k chr01 356 277 205207 205285 C 80 78.75 1560 reject_low 74,75,76 ALIGNMENT 185 YS2-1l12.p1k chr01 657 1013 205587 205943 F 357 84.31 1301 reject_low 22 ALIGNMENT 0 YS2-1l12.p1k chr01 168 62 13804 13803 C 107 0.00 1301 reject_low 73 ALIGNMENT 0 YS2-1l12.p1k chr08 62 631 526885 526884 F 570 0.00 1301 reject_low 29 ALIGNMENT 61 YS2-1l12.p1k chr08 783 880 539568 539665 F 98 87.76 1301 reject_low 61 ALIGNMENT 166 YS2-1l12.q1k chr08 377 152 526374 526598 C 226 91.59 1560 reject_low 16 ALIGNMENT 0 YS2-1l12.q1k chr01 153 122 206354 206353 C 32 0.00 1560 reject_low 26 ALIGNMENT 0 YS2-1l12.q1k chr01 122 182 25849 25848 F 61 0.00 1560 reject_low 21 ALIGNMENT 0 YS2-1l12.q1k chr01 122 164 26236 26235 F 43 0.00 1560 reject_low 8 ALIGNMENT 112 YS2-1l12.q1k chr01 156 434 25417 25692 F 279 81.00 1560 reject_low 4 ALIGNMENT 173 YS2-1l12.q1k chr08 436 154 526587 526866 C 283 87.99 1560 reject_low 13 ALIGNMENT 30 YS2-1l12.q1k chr01 303 348 13266 13311 F 46 89.13 1560 reject_low 9 ALIGNMENT 0 YS2-1l12.p1k chr01 788 62 27130 27129 C 727 0.00 1301 reject_low 55 ALIGNMENT 41 YS2-1l12.q1k chr01 159 233 25690 25764 F 75 85.33 1560 reject_low 19 ALIGNMENT 57 YS2-1l12.p1k chr01 783 870 218957 219044 F 88 88.64 1301 reject_low 77 ALIGNMENT 0 YS2-1l12.q1k chr01 122 182 26389 26388 F 61 0.00 1560 reject_low 10 ALIGNMENT 0 YS2-1l12.p1k chr01 871 917 219045 218956 F 47 0.00 1301 reject_low 77 ALIGNMENT 0 YS2-1l12.q1k chr08 274 122 527286 527285 C 153 0.00 1560 reject_low 18 ALIGNMENT 0 YS2-1l12.q1k chr01 153 122 206084 206083 C 32 0.00 1560 reject_low 25 ALIGNMENT 53 YS2-1l12.p1k chr01 1013 924 27040 27129 C 90 86.67 1301 reject_low 60 ALIGNMENT 0 YS2-1l12.q1k chr01 122 302 13266 13265 F 181 0.00 1560 reject_low 9 ALIGNMENT 38 YS2-1l12.p1k chr01 651 895 204501 204745 F 245 73.06 1301 reject_low 68 ALIGNMENT 0 YS2-1l12.p1k chr01 736 872 219044 219043 F 137 0.00 1301 reject_low 12 ALIGNMENT 243 YS2-1l12.p1k chr08 654 1020 526637 527003 F 367 89.10 1301 reject_low 32 ALIGNMENT 80 YS2-1l12.p1k chr08 654 762 527177 527285 F 109 91.74 1301 reject_low 52 ALIGNMENT 25 YS2-1l12.q1k chr01 356 277 205342 205420 C 80 78.75 1560 reject_low 45 ALIGNMENT 29 YS2-1l12.q1k chr01 233 183 205464 205514 C 51 86.27 1560 reject_low 76 ALIGNMENT 0 YS2-1l12.p1k chr01 650 62 26998 26997 C 589 0.00 1301 reject_low 71 ALIGNMENT 0 YS2-1l12.p1k chr01 62 631 206102 206101 F 570 0.00 1301 reject_low 33 ALIGNMENT 52 YS2-1l12.p1k chr01 657 1007 204777 205127 F 351 73.22 1301 reject_low 65 ALIGNMENT 37 YS2-1l12.p1k chr01 895 651 26618 26862 C 245 73.06 1301 reject_low 70 ALIGNMENT 197 YS2-1l12.p1k chr01 1016 657 25417 25776 C 360 85.28 1301 reject_low 36 ALIGNMENT 38 YS2-1l12.q1k chr01 356 165 205072 205262 C 192 75.00 1560 reject_low 40 ALIGNMENT 0 YS2-1l12.q1k chr01 164 122 205263 205262 C 43 0.00 1560 reject_low 40 ALIGNMENT 0 YS2-1l12.p1k chr01 62 650 204366 204365 F 589 0.00 1301 reject_low 72 ALIGNMENT 0 YS2-1l12.p1k chr01 656 62 26587 26586 C 595 0.00 1301 reject_low 64 ALIGNMENT 38 YS2-1l12.q1k chr01 165 233 26236 26304 F 69 85.51 1560 reject_low 8 ALIGNMENT 0 YS2-1l12.q1k chr01 276 234 205286 205463 C 43 0.00 1560 reject_low 76 ALIGNMENT 41 YS2-1l12.q1k chr01 233 159 205599 205673 C 75 85.33 1560 reject_low 74 ALIGNMENT 50 YS2-1l12.p1k chr08 921 1013 526229 526321 F 93 84.95 1301 reject_low 63 ALIGNMENT 97 YS2-1l12.q1k chr08 377 152 526239 526463 C 226 81.42 1560 reject_low 28 ALIGNMENT 0 YS2-1l12.q1k chr01 234 276 25765 25942 F 43 0.00 1560 reject_low 19 ALIGNMENT 0 YS2-1l12.p1k chr01 62 656 205047 205046 F 595 0.00 1301 reject_low 40,42,45,74,75,76 ALIGNMENT 0 YS2-1l12.p1k chr08 62 782 539568 539567 F 721 0.00 1301 reject_low 61 ALIGNMENT 83 YS2-1l12.p1k chr01 657 1007 205047 205397 F 351 76.07 1301 reject_low 40,42,45,74,75,76 ALIGNMENT 99 YS2-1l12.q1k chr01 384 154 206259 206488 C 231 81.39 1560 reject_low 23 ALIGNMENT 0 YS2-1l12.p1k chr08 763 872 527285 527284 F 110 0.00 1301 reject_low 52 ALIGNMENT 0 YS2-1l12.p1k chr01 62 656 204777 204776 F 595 0.00 1301 reject_low 65 ALIGNMENT 0 YS2-1l12.p1k chr01 62 644 205845 205844 F 583 0.00 1301 reject_low 39 ALIGNMENT 0 YS2-1l12.p1k chr08 62 917 539568 539567 F 856 0.00 1301 reject_low 57 ALIGNMENT 145 YS2-1l12.p1k chr01 632 897 206372 206637 F 266 85.34 1301 reject_low 41 ALIGNMENT 0 YS2-1l12.p1k chr01 62 631 205967 205966 F 570 0.00 1301 reject_low 35 ALIGNMENT 0 YS2-1l12.p1k chr01 763 872 206637 206636 F 110 0.00 1301 reject_low 59 ALIGNMENT 79 YS2-1l12.q1k chr01 384 159 205989 206213 C 226 78.76 1560 reject_low 27 ALIGNMENT 0 YS2-1l12.q1k chr01 164 122 205398 205397 C 43 0.00 1560 reject_low 75 ALIGNMENT 0 YS2-1l12.q1k chr01 158 122 206619 206618 C 37 0.00 1560 reject_low 24 ALIGNMENT 0 YS2-1l12.p1k chr01 62 782 218957 218956 F 721 0.00 1301 reject_low 77 ALIGNMENT 0 YS2-1l12.q1k chr01 182 122 205515 205514 C 61 0.00 1560 reject_low 76 ALIGNMENT 0 YS2-1l12.q1k chr01 182 122 204975 204974 C 61 0.00 1560 reject_low 46 ALIGNMENT 0 YS2-1l12.p1k chr01 62 168 218482 218481 F 107 0.00 1301 reject_low 12 ALIGNMENT 42 YS2-1l12.p1k chr01 880 809 13256 13327 C 72 86.11 1301 reject_low 73 ALIGNMENT 0 YS2-1l12.q1k chr08 153 122 526867 526866 C 32 0.00 1560 reject_low 13 ALIGNMENT 304 YS2-1l12.p1k chr08 639 1020 526352 526733 F 382 93.72 1301 reject_low 13,14,15,16,17,18 ALIGNMENT 0 YS2-1l12.p1k chr01 62 776 204219 204218 F 715 0.00 1301 reject_low 56 ALIGNMENT 138 YS2-1l12.p1k chr01 657 1018 205452 205813 F 362 80.39 1301 reject_low 44 ALIGNMENT 212 YS2-1l12.p1k chr08 169 745 539093 539665 F 577 79.55 1301 reject_low 11 ALIGNMENT 53 YS2-1l12.p1k chr01 912 1013 204219 204323 F 102 85.29 1301 reject_low 58 ALIGNMENT 0 YS2-1l12.q1k chr08 151 122 526599 526598 C 30 0.00 1560 reject_low 16 ALIGNMENT 0 YS2-1l12.p1k chr01 62 650 205176 205175 F 589 0.00 1301 reject_low 53 ALIGNMENT 32 YS2-1l12.q1k chr01 183 233 25849 25899 F 51 88.24 1560 reject_low 21 ALIGNMENT 142 YS2-1l12.q1k chr08 384 152 526907 527138 C 233 87.55 1560 reject_low 17 ALIGNMENT 67 YS2-1l12.p1k chr01 1007 789 26911 27129 C 219 77.17 1301 reject_low 55 ALIGNMENT 0 YS2-1l12.p1k chr08 746 872 539665 539664 F 127 0.00 1301 reject_low 11 ALIGNMENT 0 YS2-1l12.p1k chr01 62 656 204912 204911 F 595 0.00 1301 reject_low 46 ALIGNMENT 0 YS2-1l12.p1k chr08 62 920 526229 526228 F 859 0.00 1301 reject_low 63 ALIGNMENT 47 YS2-1l12.p1k chr01 745 674 13256 13327 C 72 88.89 1301 reject_low 73 ALIGNMENT 274 YS2-1l12.p1k chr01 895 167 26888 27613 C 729 79.84 1301 reject_low 4,5,6,7,8,9,10,19,20,21 ALIGNMENT 0 YS2-1l12.p1k chr06 872 242 30090 30089 C 631 0.00 1301 accept 0 ALIGNMENT 35 YS2-1l12.p1k chr01 651 895 204366 204610 F 245 72.65 1301 reject_low 72 ALIGNMENT 55 YS2-1l12.p1k chr01 645 762 206520 206637 F 118 83.05 1301 reject_low 59 ALIGNMENT 78 YS2-1l12.p1k chr01 1013 657 25690 26046 C 357 75.63 1301 reject_low 50 ALIGNMENT 0 YS2-1l12.p1k chr01 656 62 26047 26046 C 595 0.00 1301 reject_low 50 ALIGNMENT 0 YS2-1l12.q1k chr08 158 122 526322 526321 C 37 0.00 1560 reject_low 47 ALIGNMENT 172 YS2-1l12.q1k chr08 434 159 526994 527266 C 276 88.41 1560 reject_low 14 ALIGNMENT 0 YS2-1l12.p1k chr01 650 62 26863 26862 C 589 0.00 1301 reject_low 70 ALIGNMENT 0 YS2-1l12.p1k chr01 62 911 204219 204218 F 850 0.00 1301 reject_low 58 ALIGNMENT 37 YS2-1l12.p1k chr01 657 1007 204642 204992 F 351 71.79 1301 reject_low 67 ALIGNMENT 184 YS2-1l12.p1k chr01 632 1018 205967 206353 F 387 82.95 1301 reject_low 35 ALIGNMENT 25 YS2-1l12.q1k chr01 277 356 26078 26156 F 80 78.75 1560 reject_low 20 ALIGNMENT 0 YS2-1l12.p1k chr01 62 656 205587 205586 F 595 0.00 1301 reject_low 22 ALIGNMENT 54 YS2-1l12.p1k chr01 1007 657 26236 26586 C 351 73.50 1301 reject_low 64 ALIGNMENT 407 YS2-1l12.p1k chr08 167 1020 525748 526598 F 854 83.37 1301 reject_low 1 ALIGNMENT 0 YS2-1l12.q1k chr01 276 122 205421 205420 C 155 0.00 1560 reject_low 45 ALIGNMENT 35 YS2-1l12.p1k chr01 895 651 26753 26997 C 245 72.65 1301 reject_low 71 ALIGNMENT 206 YS2-1l12.p1k chr01 169 735 218482 219044 F 567 79.37 1301 reject_low 12 ALIGNMENT 0 YS2-1l12.p1k chr01 943 62 13328 13327 C 882 0.00 1301 reject_low 66 ALIGNMENT 38 YS2-1l12.q1k chr01 233 165 205329 205397 C 69 85.51 1560 reject_low 75 ALIGNMENT 367 YS2-1l12.p1k chr01 167 895 203750 204475 F 729 83.95 1301 reject_low 3 ALIGNMENT 0 YS2-1l12.p1k chr01 62 644 206520 206519 F 583 0.00 1301 reject_low 59 ALIGNMENT 0 YS2-1l12.p1k chr08 62 653 526637 526636 F 592 0.00 1301 reject_low 32 ALIGNMENT 175 YS2-1l12.q1k chr08 436 152 526452 526733 C 285 88.07 1560 reject_low 1 ALIGNMENT 38 YS2-1l12.q1k chr01 233 165 205059 205127 C 69 85.51 1560 reject_low 42 ALIGNMENT 78 YS2-1l12.p1k chr01 1007 651 25831 26187 C 357 75.63 1301 reject_low 49 ALIGNMENT 0 YS2-1l12.p1k chr01 62 631 205697 205696 F 570 0.00 1301 reject_low 23,24,25,26,27 ALIGNMENT 0 YS2-1l12.q1k chr01 122 164 25966 25965 F 43 0.00 1560 reject_low 20 ALIGNMENT 0 YS2-1l12.p1k chr01 62 656 205452 205451 F 595 0.00 1301 reject_low 44 ALIGNMENT 197 YS2-1l12.p1k chr01 632 1013 206237 206618 F 382 84.29 1301 reject_low 34 ALIGNMENT 287 YS2-1l12.p1k chr08 632 1013 526885 527266 F 382 92.15 1301 reject_low 29 ALIGNMENT 0 YS2-1l12.q1k chr01 153 122 205814 205813 C 32 0.00 1560 reject_low 3 ALIGNMENT 204 YS2-1l12.p1k chr06 241 32 30089 30298 C 210 99.52 1301 accept 0 ALIGNMENT 0 YS2-1l12.p1k chr01 656 62 25777 25776 C 595 0.00 1301 reject_low 36 ALIGNMENT 0 YS2-1l12.p1k chr08 62 653 526772 526771 F 592 0.00 1301 reject_low 31 ALIGNMENT 0 YS2-1l12.p1k chr01 62 166 203750 203749 F 105 0.00 1301 reject_low 3 ALIGNMENT 0 YS2-1l12.p1k chr01 656 62 26722 26721 C 595 0.00 1301 reject_low 69 ALIGNMENT 0 YS2-1l12.p1k chr01 62 631 206372 206371 F 570 0.00 1301 reject_low 41 ALIGNMENT 0 YS2-1l12.p1k chr01 673 628 13328 13346 C 46 0.00 1301 reject_low 73 ALIGNMENT 0 YS2-1l12.p1k chr08 62 785 526229 526228 F 724 0.00 1301 reject_low 28 ALIGNMENT 0 YS2-1l12.p1k chr01 872 763 25402 25401 C 110 0.00 1301 reject_low 62 ALIGNMENT 0 YS2-1l12.q1k chr01 158 122 205674 205673 C 37 0.00 1560 reject_low 74 ALIGNMENT 0 YS2-1l12.q1k chr01 234 276 26035 26077 F 43 0.00 1560 reject_low 20 ALIGNMENT 38 YS2-1l12.q1k chr01 165 356 26101 26291 F 192 75.00 1560 reject_low 7 ALIGNMENT 78 YS2-1l12.q1k chr01 384 154 205854 206083 C 231 78.35 1560 reject_low 25 ALIGNMENT 38 YS2-1l12.q1k chr01 165 233 25966 26034 F 69 85.51 1560 reject_low 20 ALIGNMENT 0 YS2-1l12.p1k chr08 62 638 526352 526351 F 577 0.00 1301 reject_low 13,14,15,16,17,18 ALIGNMENT 0 YS2-1l12.p1k chr01 656 62 25507 25506 C 595 0.00 1301 reject_low 62 ALIGNMENT 0 YS2-1l12.q1k chr01 158 122 205944 205943 C 37 0.00 1560 reject_low 22 ALIGNMENT 0 YS2-1l12.q1k chr01 122 164 26101 26100 F 43 0.00 1560 reject_low 7 ALIGNMENT 0 YS2-1l12.p1k chr01 650 62 26188 26187 C 589 0.00 1301 reject_low 49 ALIGNMENT 137 YS2-1l12.q1k chr08 434 152 526724 527003 C 283 83.75 1560 reject_low 15 ALIGNMENT 45 YS2-1l12.q1k chr01 159 228 13258 13327 F 70 88.57 1560 reject_low 6 ALIGNMENT 103 YS2-1l12.q1k chr01 154 356 25550 25751 F 203 84.24 1560 reject_low 5 ALIGNMENT 0 YS2-1l12.q1k chr08 151 122 526734 526733 C 30 0.00 1560 reject_low 1 ALIGNMENT 0 YS2-1l12.p1k chr08 62 653 527177 527176 F 592 0.00 1301 reject_low 52 ALIGNMENT 157 YS2-1l12.p1k chr01 897 632 25401 25666 C 266 86.84 1301 reject_low 38 ALIGNMENT 0 YS2-1l12.q1k chr01 276 234 205286 205598 C 43 0.00 1560 reject_low 74 ALIGNMENT 53 YS2-1l12.q1k chrm 36 163 48836 48959 F 128 93.75 1560 reject_low 2 ALIGNMENT 0 YS2-1l12.p1k chr08 62 166 525748 525747 F 105 0.00 1301 reject_low 1 ALIGNMENT 261 YS2-1l12.p1k chr08 654 1020 526772 527138 F 367 90.74 1301 reject_low 31 ALIGNMENT 0 YS2-1l12.p1k chr08 62 653 526502 526501 F 592 0.00 1301 reject_low 30 ALIGNMENT 29 YS2-1l12.q1k chr01 183 233 26389 26439 F 51 86.27 1560 reject_low 10 ALIGNMENT 75 YS2-1l12.p1k chr01 651 1007 205176 205532 F 357 75.35 1301 reject_low 53 ALIGNMENT 166 YS2-1l12.p1k chr01 645 1013 205845 206213 F 369 82.11 1301 reject_low 39 ALIGNMENT 0 YS2-1l12.q1k chr01 276 234 205286 205328 C 43 0.00 1560 reject_low 75 ALIGNMENT 0 YS2-1l12.p1k chr08 62 653 527042 527041 F 592 0.00 1301 reject_low 37 ALIGNMENT 205 YS2-1l12.p1k chr01 632 1018 205697 206083 F 387 84.75 1301 reject_low 23,24,25,26,27 ALIGNMENT 0 YS2-1l12.p1k chr01 631 62 25667 25666 C 570 0.00 1301 reject_low 38 ALIGNMENT 61 YS2-1l12.p1k chr08 918 1013 539568 539663 F 96 88.54 1301 reject_low 57 ALIGNMENT 0 YS2-1l12.p1k chr01 656 62 26317 26316 C 595 0.00 1301 reject_low 48 ALIGNMENT 76 YS2-1l12.p1k chr01 657 1013 205317 205673 F 357 75.35 1301 reject_low 51 ALIGNMENT 0 YS2-1l12.q1k chr01 153 122 206489 206488 C 32 0.00 1560 reject_low 23 ALIGNMENT 199 YS2-1l12.p1k chr08 654 897 527042 527285 F 244 94.26 1301 reject_low 37 ALIGNMENT 100 YS2-1l12.q1k chr01 434 159 205671 205943 C 276 79.71 1560 reject_low 22 ALIGNMENT 0 YS2-1l12.p1k chr01 62 656 204642 204641 F 595 0.00 1301 reject_low 67 ALIGNMENT 25 YS2-1l12.q1k chr01 277 356 25943 26021 F 80 78.75 1560 reject_low 19,21 ALIGNMENT 0 YS2-1l12.p1k chr08 62 168 539093 539092 F 107 0.00 1301 reject_low 11 ALIGNMENT 73 YS2-1l12.p1k chr01 1007 657 26101 26451 C 351 75.21 1301 reject_low 54 ALIGNMENT 29 YS2-1l12.q1k chr01 233 183 204924 204974 C 51 86.27 1560 reject_low 46 ALIGNMENT 53 YS2-1l12.p1k chr01 918 1005 218957 219044 F 88 87.50 1301 reject_low 77 ALIGNMENT 0 YS2-1l12.p1k chr01 808 746 13328 13255 C 63 0.00 1301 reject_low 73 ALIGNMENT 0 YS2-1l12.q1k chr01 122 158 25690 25689 F 37 0.00 1560 reject_low 19 ALIGNMENT 0 YS2-1l12.p1k chr01 166 62 27614 27613 C 105 0.00 1301 reject_low 4,5,6,7,8,9,10,19,20,21 ALIGNMENT 103 YS2-1l12.q1k chr01 356 154 205612 205813 C 203 84.24 1560 reject_low 3 ALIGNMENT 0 YS2-1l12.p1k chr01 656 62 25912 25911 C 595 0.00 1301 reject_low 43 ALIGNMENT 73 YS2-1l12.q1k chr08 436 275 527127 527285 C 162 83.33 1560 reject_low 18 ALIGNMENT 0 YS2-1l12.p1k chr01 923 62 27130 27129 C 862 0.00 1301 reject_low 60 ALIGNMENT 0 YS2-1l12.p1k chr01 62 656 205317 205316 F 595 0.00 1301 reject_low 51 ALIGNMENT 0 YS2-1l12.q1k chr01 164 122 205128 205127 C 43 0.00 1560 reject_low 42 ALIGNMENT 127 YS2-1l12.p1k chr08 786 1020 526229 526463 F 235 85.11 1301 reject_low 28 ALIGNMENT 0 YS2-1l12.q1k chr08 151 122 527004 527003 C 30 0.00 1560 reject_low 15 ALIGNMENT 44 YS2-1l12.p1k chr01 1013 944 13258 13327 C 70 88.57 1301 reject_low 66 ALIGNMENT 67 YS2-1l12.p1k chr01 777 1007 204219 204452 F 231 77.06 1301 reject_low 56 ALIGNMENT 0 YS2-1l12.q1k chr01 122 153 25550 25549 F 32 0.00 1560 reject_low 5 ALIGNMENT 59 YS2-1l12.p1k chr01 762 657 25401 25506 C 106 85.85 1301 reject_low 62 ALIGNMENT 141 YS2-1l12.p1k chr01 1018 657 25550 25911 C 362 80.66 1301 reject_low 43 ALIGNMENT 301 YS2-1l12.p1k chr08 654 1018 526502 526866 F 365 94.52 1301 reject_low 30 ALIGNMENT 78 YS2-1l12.q1k chr01 384 154 206124 206353 C 231 78.35 1560 reject_low 26 ALIGNMENT 0 YS2-1l12.q1k chr08 158 122 527267 527266 C 37 0.00 1560 reject_low 14 ALIGNMENT 145 YS2-1l12.p1k chr01 627 169 13347 13803 C 459 78.00 1301 reject_low 73 ALIGNMENT 0 YS2-1l12.q1k chr01 158 122 206214 206213 C 37 0.00 1560 reject_low 27 ALIGNMENT 0 YS2-1l12.q1k chr08 151 122 526464 526463 C 30 0.00 1560 reject_low 28 ALIGNMENT 0 YS2-1l12.q1k chr01 234 276 25900 25942 F 43 0.00 1560 reject_low 21 ALIGNMENT 36 YS2-1l12.p1k chr01 1007 657 26371 26721 C 351 71.79 1301 reject_low 69 ALIGNMENT 199 YS2-1l12.p1k chr01 632 1018 206102 206488 F 387 84.24 1301 reject_low 33 ALIGNMENT 0 YS2-1l12.p1k chr01 62 631 206237 206236 F 570 0.00 1301 reject_low 34 ALIGNMENT 82 YS2-1l12.p1k chr01 1007 657 25966 26316 C 351 76.07 1301 reject_low 48 ALIGNMENT 0 YS2-1l12.q1k chr01 122 155 25417 25416 F 34 0.00 1560 reject_low 4 ALIGNMENT 70 YS2-1l13.q1k chr16 666 741 810671 810746 F 76 97.37 1335 reject_low 8 ALIGNMENT 0 YS2-1l13.q1k chr06 666 62 137555 137554 C 605 0.00 1335 reject_low 9 ALIGNMENT 0 YS2-1l13.q1k chr16 62 665 810671 810670 F 604 0.00 1335 reject_low 8 ALIGNMENT 895 YS2-1l13.p1k chr03 1104 25 128184 129272 C 1080 95.56 1249 accept 0 ALIGNMENT 74 YS2-1l13.q1k chr14 667 749 102716 102798 F 83 96.39 1335 reject_low 5 ALIGNMENT 0 YS2-1l13.q1k chr14 62 666 632601 632600 F 605 0.00 1335 reject_low 2 ALIGNMENT 71 YS2-1l13.q1k chr11 667 749 74629 74711 F 83 95.18 1335 reject_low 7 ALIGNMENT 72 YS2-1l13.q1k chr07 662 742 731137 731217 F 81 96.30 1335 reject_low 3 ALIGNMENT 0 YS2-1l13.q1k chr15 62 666 487440 487439 F 605 0.00 1335 reject_low 4 ALIGNMENT 0 YS2-1l13.q1k chr12 659 62 976059 976058 C 598 0.00 1335 reject_low 1 ALIGNMENT 0 YS2-1l13.q1k chr11 62 666 74629 74628 F 605 0.00 1335 reject_low 7 ALIGNMENT 0 YS2-1l13.q1k chr07 62 661 731137 731136 F 600 0.00 1335 reject_low 3 ALIGNMENT 71 YS2-1l13.q1k chr14 667 752 632601 632685 F 86 95.35 1335 reject_low 2 ALIGNMENT 77 YS2-1l13.q1k chr15 667 749 487440 487522 F 83 97.59 1335 reject_low 4 ALIGNMENT 73 YS2-1l13.q1k chr15 667 748 228329 228410 F 82 96.34 1335 reject_low 6 ALIGNMENT 0 YS2-1l13.q1k chr15 62 666 228329 228328 F 605 0.00 1335 reject_low 6 ALIGNMENT 726 YS2-1l13.q1k chr03 29 1045 127102 128099 F 1017 92.63 1335 accept 0 ALIGNMENT 76 YS2-1l13.q1k chr12 749 660 975970 976058 C 90 95.56 1335 reject_low 1 ALIGNMENT 70 YS2-1l13.q1k chr06 742 667 137479 137554 C 76 97.37 1335 reject_low 9 ALIGNMENT 0 YS2-1l13.q1k chr14 62 666 102716 102715 F 605 0.00 1335 reject_low 5 ALIGNMENT 152 YS2-1l14.p1k chr13 195 34 232618 232779 C 162 98.15 213 accept 0 ALIGNMENT 0 YS2-1l14.p1k chr13 213 196 232619 232618 C 18 0.00 213 accept 0 ALIGNMENT 35 YS2-1l16.q1k chrm 311 355 83053 83097 F 45 95.56 1456 reject_low 13 ALIGNMENT 39 YS2-1l16.q1k chrm 304 363 66819 66878 F 60 88.33 1456 reject_low 9 ALIGNMENT 0 YS2-1l16.q1k chrm 108 303 66819 66818 F 196 0.00 1456 reject_low 9 ALIGNMENT 0 YS2-1l16.q1k chrm 108 300 76584 76583 F 193 0.00 1456 reject_low 2 ALIGNMENT 283 YS2-1l16.q1k chrm 38 465 77391 77831 F 428 94.63 1456 accept 0 ALIGNMENT 604 YS2-1l16.p1k chrm 896 30 78494 79365 C 867 97.69 1399 accept 0 ALIGNMENT 42 YS2-1l16.q1k chrm 311 365 34286 34340 F 55 92.73 1456 reject_low 8 ALIGNMENT 0 YS2-1l16.q1k chrm 108 310 2094 2093 F 203 0.00 1456 reject_low 14 ALIGNMENT 49 YS2-1l16.q1k chrm 378 311 12244 12311 C 68 91.18 1456 reject_low 1 ALIGNMENT 41 YS2-1l16.q1k chrm 375 312 57007 57071 C 64 89.06 1456 reject_low 7 ALIGNMENT 0 YS2-1l16.q1k chrm 108 302 48093 48092 F 195 0.00 1456 reject_low 10 ALIGNMENT 48 YS2-1l16.q1k chrm 301 375 76584 76657 F 75 89.33 1456 reject_low 2 ALIGNMENT 0 YS2-1l16.q1k chrm 108 310 9031 9030 F 203 0.00 1456 reject_low 12 ALIGNMENT 0 YS2-1l16.q1k chrm 310 108 71257 71256 C 203 0.00 1456 reject_low 11 ALIGNMENT 42 YS2-1l16.q1k chrm 301 373 34922 34995 F 73 87.67 1456 reject_low 5 ALIGNMENT 0 YS2-1l16.q1k chrm 300 108 2805 2804 C 193 0.00 1456 reject_low 3 ALIGNMENT 0 YS2-1l16.q1k chrm 108 310 84487 84486 F 203 0.00 1456 reject_low 4 ALIGNMENT 42 YS2-1l16.q1k chrm 377 301 2727 2804 C 77 85.71 1456 reject_low 3 ALIGNMENT 0 YS2-1l16.q1k chrm 108 310 34286 34285 F 203 0.00 1456 reject_low 8 ALIGNMENT 0 YS2-1l16.q1k chrm 311 108 57072 57071 C 204 0.00 1456 reject_low 7 ALIGNMENT 0 YS2-1l16.q1k chrm 310 108 12312 12311 C 203 0.00 1456 reject_low 1 ALIGNMENT 35 YS2-1l16.q1k chrm 311 355 9031 9075 F 45 95.56 1456 reject_low 12 ALIGNMENT 0 YS2-1l16.q1k chrm 108 301 29830 29829 F 194 0.00 1456 reject_low 6 ALIGNMENT 38 YS2-1l16.q1k chrm 303 353 48093 48143 F 51 92.16 1456 reject_low 10 ALIGNMENT 53 YS2-1l16.q1k chrm 311 367 84487 84543 F 57 98.25 1456 reject_low 4 ALIGNMENT 42 YS2-1l16.q1k chrm 360 311 71207 71256 C 50 96.00 1456 reject_low 11 ALIGNMENT 33 YS2-1l16.q1k chrm 311 353 2094 2136 F 43 95.35 1456 reject_low 14 ALIGNMENT 0 YS2-1l16.q1k chrm 108 310 83053 83052 F 203 0.00 1456 reject_low 13 ALIGNMENT 0 YS2-1l16.q1k chrm 108 300 34922 34921 F 193 0.00 1456 reject_low 5 ALIGNMENT 46 YS2-1l16.q1k chrm 302 357 29830 29886 F 56 94.64 1456 reject_low 6 ALIGNMENT 817 YS2-1l17.q1k chr15 1133 29 1075962 1077067 C 1105 92.40 1368 accept_tel 0 ALIGNMENT 792 YS2-1l17.p1k chr16 1139 189 14535 15500 C 951 95.16 1157 reject_low 1 ALIGNMENT 0 YS2-1l17.p1k chr16 188 133 15501 15494 C 56 0.00 1157 reject_low 1 ALIGNMENT 893 YS2-1l17.p1k chr15 33 1151 1075479 1076613 F 1119 94.01 1157 accept_tel 0 ALIGNMENT 864 YS2-1l17.q1k chr16 25 1133 14063 15174 F 1109 93.69 1368 reject_low 1 ALIGNMENT 93 YS2-1l17.p1k chr16 132 33 15495 15595 C 100 99.00 1157 reject_low 1 ALIGNMENT 0 YS2-1l18.q1k vc_1 304 321 2991 2990 F 18 0.00 1084 reject_low 3 ALIGNMENT 299 YS2-1l18.q1k vc_1 1 303 2689 2991 F 303 99.67 1084 reject_low 3 ALIGNMENT 65 YS2-1l18.q1k vc_4 304 238 46 112 C 67 100.00 1084 reject_low 8 ALIGNMENT 244 YS2-1l18.q1k vc_7 303 53 4922 5172 C 251 99.20 1084|0,1 reject_low 7 ALIGNMENT 0 YS2-1l18.q1k vc_7 53 54 5172 6360 C 0 0.00 1084 reject_low 7 ALIGNMENT 488 YS2-1l18.q1k vc_5 1 687 2556 3234 F 687 91.56 1084 reject_vc 0 ALIGNMENT 65 YS2-1l18.q1k vc_4 304 238 6273 6339 C 67 100.00 1084 reject_low 9 ALIGNMENT 0 YS2-1l18.q1k vc_4 305 307 1615 1878 F 3 0.00 1084 reject_low 6 ALIGNMENT 181 YS2-1l18.q1k vc_4 308 687 1879 2250 F 380 85.00 1084 reject_low 6 ALIGNMENT 0 YS2-1l18.q1k vc_4 321 305 6274 6273 C 17 0.00 1084 reject_low 9 ALIGNMENT 0 YS2-1l18.q1k vc_4 62 237 1548 1547 F 176 0.00 1084 reject_low 6 ALIGNMENT 0 YS2-1l18.q1k vc_4 237 62 6340 6339 C 176 0.00 1084 reject_low 9 ALIGNMENT 0 YS2-1l18.q1k vc_2 304 321 2624 2623 F 18 0.00 1084 reject_low 4 ALIGNMENT 299 YS2-1l18.q1k vc_2 1 303 2322 2624 F 303 99.67 1084 reject_low 4 ALIGNMENT 299 YS2-1l18.q1k vc_3 1 303 2689 2991 F 303 99.67 1084 reject_low 5 ALIGNMENT 401 YS2-1l18.q1k vc_4 418 1 5235 5654 C 418 98.80 1084 reject_low 2 ALIGNMENT 0 YS2-1l18.q1k vc_4 321 305 47 46 C 17 0.00 1084 reject_low 8 ALIGNMENT 0 YS2-1l18.q1k vc_3 304 321 2991 2990 F 18 0.00 1084 reject_low 5 ALIGNMENT 0 YS2-1l18.q1k vc_7 304 304 4700 4921 C 1 0.00 1084 reject_low 7 ALIGNMENT 106 YS2-1l18.q1k vc_7 418 305 4586 4699 C 114 98.25 1084 reject_low 7 ALIGNMENT 51 YS2-1l18.q1k vc_7 54 3 6360 6411 C 52 100.00 1084|1,0 reject_low 7 ALIGNMENT 478 YS2-1l18.q1k vc_7 642 1 1935 2569 C 642 92.68 1084 reject_low 1 ALIGNMENT 65 YS2-1l18.q1k vc_4 238 304 1548 1614 F 67 100.00 1084 reject_low 6 ALIGNMENT 0 YS2-1l18.q1k vc_4 237 62 113 112 C 176 0.00 1084 reject_low 8 ALIGNMENT 94 YS2-1l19.q1k chr06 576 469 31622 31729 C 108 98.15 1384 reject_low 3 ALIGNMENT 822 YS2-1l19.q1k chr12 36 958 468015 468930 F 923 98.05 1384 manual 2 ALIGNMENT 79 YS2-1l19.q1k chr12 836 961 489348 489469 F 126 89.68 1384 reject_low 4 ALIGNMENT 0 YS2-1l19.q1k chr12 110 835 472464 472463 F 726 0.00 1384 reject_low 5 ALIGNMENT 0 YS2-1l19.q1k chr06 468 110 31730 31729 C 359 0.00 1384 reject_low 3 ALIGNMENT 76 YS2-1l19.q1k chr12 836 958 472464 472582 F 123 89.43 1384 reject_low 5 ALIGNMENT 825 YS2-1l19.q1k chr12 36 983 458878 459817 F 948 97.47 1384 manual 1 ALIGNMENT 0 YS2-1l19.q1k chr12 110 835 485696 485695 F 726 0.00 1384 reject_low 7 ALIGNMENT 0 YS2-1l19.q1k chr12 110 835 489348 489347 F 726 0.00 1384 reject_low 4 ALIGNMENT 0 YS2-1l19.q1k chr12 110 835 482044 482043 F 726 0.00 1384 reject_low 6 ALIGNMENT 0 YS2-1l19.q1k chr06 762 577 31623 31622 C 186 0.00 1384 reject_low 3 ALIGNMENT 76 YS2-1l19.q1k chr12 836 958 482044 482162 F 123 89.43 1384 reject_low 6 ALIGNMENT 879 YS2-1l19.p1k chr09 1086 38 128102 129165 C 1049 95.23 1400 accept_chi 0 ALIGNMENT 76 YS2-1l19.q1k chr12 836 958 485696 485814 F 123 89.43 1384 reject_low 7 ALIGNMENT 885 YS2-1l20.p1k chr14 28 1118 683923 685028 F 1091 95.14 1406 accept 0 ALIGNMENT 795 YS2-1l20.q1k chr14 959 33 684724 685647 C 927 95.90 1367 accept 0 ALIGNMENT 0 YS2-1l21.q1k chrm 447 142 53829 53828 C 306 0.00 1377 reject_low 23 ALIGNMENT 109 YS2-1l21.p1k chrm 584 111 76755 77223 C 474 75.32 1220 accept 0 ALIGNMENT 0 YS2-1l21.q1k chrm 447 143 81405 81404 C 305 0.00 1377 reject_low 27 ALIGNMENT 0 YS2-1l21.q1k chrm 447 152 69435 69434 C 296 0.00 1377 reject_low 18 ALIGNMENT 0 YS2-1l21.q1k chrm 447 144 9032 9031 C 304 0.00 1377 reject_low 11 ALIGNMENT 50 YS2-1l21.q1k chrm 95 150 9484 9539 F 56 96.43 1377 reject_low 15 ALIGNMENT 46 YS2-1l21.q1k chrm 143 87 9031 9088 C 57 94.74 1377 reject_low 11 ALIGNMENT 45 YS2-1l21.q1k chrm 143 96 34286 34333 C 48 100.00 1377 reject_low 21 ALIGNMENT 0 YS2-1l21.q1k chrm 447 153 8227 8226 C 295 0.00 1377 reject_low 12 ALIGNMENT 36 YS2-1l21.q1k chrm 142 99 52772 52815 C 44 97.73 1377 reject_low 28 ALIGNMENT 0 YS2-1l21.q1k chrm 155 447 52386 52385 F 293 0.00 1377 reject_low 9 ALIGNMENT 0 YS2-1l21.q1k chrm 447 149 2090 2089 C 299 0.00 1377 reject_low 22 ALIGNMENT 0 YS2-1l21.q1k chrm 447 151 48095 48094 C 297 0.00 1377 reject_low 20 ALIGNMENT 169 YS2-1l21.p1k vc_3 1169 744 1095 1525 C 426 81.22 1220 reject_low 4 ALIGNMENT 0 YS2-1l21.q1k chrm 447 151 76588 76587 C 297 0.00 1377 reject_low 16 ALIGNMENT 0 YS2-1l21.q1k chrm 447 144 69054 69053 C 304 0.00 1377 reject_low 25 ALIGNMENT 0 YS2-1l21.q1k chrm 447 152 80494 80493 C 296 0.00 1377 reject_low 14 ALIGNMENT 0 YS2-1l21.q1k chrm 351 351 75870 75901 F 1 0.00 1377 accept 0 ALIGNMENT 0 YS2-1l21.q1k chrm 447 151 50104 50103 C 297 0.00 1377 reject_low 10 ALIGNMENT 0 YS2-1l21.q1k chrm 447 143 52773 52772 C 305 0.00 1377 reject_low 28 ALIGNMENT 246 YS2-1l21.q1k chrm 29 350 75549 75869 F 322 95.65 1377 accept 0 ALIGNMENT 169 YS2-1l21.p1k vc_1 1169 744 1095 1525 C 426 81.22 1220 reject_low 2 ALIGNMENT 46 YS2-1l21.q1k chrm 78 154 52312 52386 F 77 89.61 1377 reject_low 9 ALIGNMENT 0 YS2-1l21.q1k chrm 447 198 66772 66771 C 250 0.00 1377 reject_low 8 ALIGNMENT 47 YS2-1l21.q1k chrm 95 143 71208 71256 F 49 100.00 1377 reject_low 19 ALIGNMENT 163 YS2-1l21.p1k vc_7 744 1169 14142 14572 F 426 80.75 1220 reject_low 6 ALIGNMENT 0 YS2-1l21.q1k chrm 151 447 2801 2800 F 297 0.00 1377 reject_low 17 ALIGNMENT 40 YS2-1l21.q1k chrm 143 96 69053 69099 C 48 97.92 1377 reject_low 25 ALIGNMENT 0 YS2-1l21.q1k chrm 447 148 35802 35801 C 300 0.00 1377 reject_low 24 ALIGNMENT 50 YS2-1l21.q1k chrm 151 95 80493 80550 C 57 96.49 1377 reject_low 14 ALIGNMENT 163 YS2-1l21.p1k vc_7 744 1169 680 1110 F 426 80.75 1220 reject_low 5 ALIGNMENT 161 YS2-1l21.p1k vc_6 744 1098 3936 4292 F 355 82.82 1220 reject_low 7 ALIGNMENT 201 YS2-1l21.q1k chrm 352 732 75902 76280 F 381 92.13 1377 accept 0 ALIGNMENT 0 YS2-1l21.q1k chrm 151 447 9539 9538 F 297 0.00 1377 reject_low 15 ALIGNMENT 45 YS2-1l21.q1k chrm 151 99 69434 69487 C 53 96.23 1377 reject_low 18 ALIGNMENT 0 YS2-1l21.q1k chrm 144 447 71256 71255 F 304 0.00 1377 reject_low 19 ALIGNMENT 41 YS2-1l21.q1k chrm 141 95 53828 53874 C 47 97.87 1377 reject_low 23 ALIGNMENT 39 YS2-1l21.q1k chrm 142 99 81404 81447 C 44 100.00 1377 reject_low 27 ALIGNMENT 44 YS2-1l21.q1k chrm 148 101 2089 2136 C 48 97.92 1377 reject_low 22 ALIGNMENT 48 YS2-1l21.q1k chrm 154 101 46303 46356 C 54 96.30 1377 reject_low 13 ALIGNMENT 0 YS2-1l21.q1k chrm 447 144 83054 83053 C 304 0.00 1377 reject_low 26 ALIGNMENT 169 YS2-1l21.p1k vc_2 1169 744 1095 1525 C 426 81.22 1220 reject_low 3 ALIGNMENT 46 YS2-1l21.q1k chrm 98 150 2749 2801 F 53 96.23 1377 reject_low 17 ALIGNMENT 0 YS2-1l21.q1k chrm 447 155 46304 46303 C 293 0.00 1377 reject_low 13 ALIGNMENT 172 YS2-1l21.p1k vc_5 1169 744 4015 4445 C 426 81.46 1220 reject_low 1 ALIGNMENT 51 YS2-1l21.q1k chrm 150 81 50103 50172 C 70 91.43 1377 reject_low 10 ALIGNMENT 0 YS2-1l21.q1k chrm 447 144 34287 34286 C 304 0.00 1377 reject_low 21 ALIGNMENT 52 YS2-1l21.q1k chrm 152 95 8226 8283 C 58 96.55 1377 reject_low 12 ALIGNMENT 55 YS2-1l21.q1k chrm 197 101 66771 66868 C 97 86.60 1377 reject_low 8 ALIGNMENT 46 YS2-1l21.q1k chrm 150 101 48094 48143 C 50 98.00 1377 reject_low 20 ALIGNMENT 50 YS2-1l21.q1k chrm 150 95 76587 76642 C 56 96.43 1377 reject_low 16 ALIGNMENT 41 YS2-1l21.q1k chrm 143 99 83053 83097 C 45 100.00 1377 reject_low 26 ALIGNMENT 42 YS2-1l21.q1k chrm 147 99 35801 35849 C 49 95.92 1377 reject_low 24 ALIGNMENT 0 YS2-1l22.p1k vc_1 896 62 2473 2472 C 835 0.00 1291 reject_low 7 ALIGNMENT 834 YS2-1l22.p1k chr12 38 879 456469 457310 F 842 99.88 1291 accept 0 ALIGNMENT 0 YS2-1l22.p1k chr12 880 903 457310 457309 F 24 0.00 1291 accept 0 ALIGNMENT 0 YS2-1l22.p1k vc_2 896 62 2106 2105 C 835 0.00 1291 reject_low 3 ALIGNMENT 148 YS2-1l22.p1k vc_4 897 1145 5871 6123 F 249 87.15 1291 reject_low 5 ALIGNMENT 0 YS2-1l22.p1k vc_4 62 896 5871 5870 F 835 0.00 1291 reject_low 5 ALIGNMENT 0 YS2-1l22.p1k vc_3 896 62 2473 2472 C 835 0.00 1291 reject_low 8 ALIGNMENT 743 YS2-1l22.q1k chr12 864 34 465618 466447 C 831 96.87 1287 accept 1 ALIGNMENT 0 YS2-1l22.p1k chr12 880 903 466447 466446 F 24 0.00 1291 accept 1 ALIGNMENT 148 YS2-1l22.p1k vc_3 1145 897 1853 2105 C 249 86.75 1291 reject_low 4 ALIGNMENT 148 YS2-1l22.p1k vc_7 897 1145 13562 13814 F 249 87.15 1291 reject_low 6 ALIGNMENT 743 YS2-1l22.q1k chr12 864 34 456481 457310 C 831 96.87 1287 accept 0 ALIGNMENT 148 YS2-1l22.p1k vc_2 1145 897 1853 2105 C 249 86.75 1291 reject_low 3 ALIGNMENT 834 YS2-1l22.p1k chr12 38 879 465606 466447 F 842 99.88 1291 accept 1 ALIGNMENT 148 YS2-1l22.p1k vc_1 1145 897 1853 2105 C 249 86.75 1291 reject_low 2 ALIGNMENT 24 YS2-1l22.p1k vc_3 925 897 2443 2472 C 29 96.55 1291 reject_low 8 ALIGNMENT 0 YS2-1l22.p1k vc_7 62 896 13562 13561 F 835 0.00 1291 reject_low 6 ALIGNMENT 0 YS2-1l22.p1k vc_3 896 62 2106 2105 C 835 0.00 1291 reject_low 4 ALIGNMENT 24 YS2-1l22.p1k vc_1 925 897 2443 2472 C 29 96.55 1291 reject_low 7 ALIGNMENT 0 YS2-1l22.p1k vc_1 896 62 2106 2105 C 835 0.00 1291 reject_low 2 ALIGNMENT 0 YS2-1l23.p1k vc_4 62 844 5871 5870 F 783 0.00 1217 reject_low 5 ALIGNMENT 179 YS2-1l23.p1k vc_7 845 1094 100 356 F 250 91.60 1217 reject_low 7 ALIGNMENT 0 YS2-1l23.p1k vc_7 62 844 13562 13561 F 783 0.00 1217 reject_low 8 ALIGNMENT 179 YS2-1l23.p1k vc_5 1094 845 4769 5025 C 250 91.60 1217 reject_low 6 ALIGNMENT 0 YS2-1l23.q1k vc_1 62 868 2532 2531 F 807 0.00 1347 reject_low 9 ALIGNMENT 22 YS2-1l23.p1k vc_3 876 845 2441 2472 C 32 93.75 1217 reject_low 14 ALIGNMENT 0 YS2-1l23.p1k vc_2 844 62 2106 2105 C 783 0.00 1217 reject_low 3 ALIGNMENT 43 YS2-1l23.q1k vc_1 869 958 2532 2617 F 90 85.56 1347 reject_low 9 ALIGNMENT 179 YS2-1l23.p1k vc_1 1094 845 1849 2105 C 250 91.60 1217 reject_low 2 ALIGNMENT 22 YS2-1l23.p1k vc_1 876 845 2441 2472 C 32 93.75 1217 reject_low 13 ALIGNMENT 0 YS2-1l23.p1k vc_1 844 62 2106 2105 C 783 0.00 1217 reject_low 2 ALIGNMENT 774 YS2-1l23.p1k chr07 826 29 835135 835932 C 798 99.62 1217 accept_chi 0 ALIGNMENT 179 YS2-1l23.p1k vc_7 845 1094 13562 13818 F 250 91.60 1217 reject_low 8 ALIGNMENT 27 YS2-1l23.q1k vc_3 866 823 2473 2515 C 44 88.64 1347 reject_low 12 ALIGNMENT 0 YS2-1l23.q1k vc_3 822 62 2516 2515 C 761 0.00 1347 reject_low 12 ALIGNMENT 27 YS2-1l23.q1k vc_1 866 823 2473 2515 C 44 88.64 1347 reject_low 11 ALIGNMENT 179 YS2-1l23.p1k vc_3 1094 845 1849 2105 C 250 91.60 1217 reject_low 4 ALIGNMENT 766 YS2-1l23.q1k chr07 29 826 835135 835932 F 798 99.12 1347 accept_chi 1 ALIGNMENT 179 YS2-1l23.p1k vc_2 1094 845 1849 2105 C 250 91.60 1217 reject_low 3 ALIGNMENT 0 YS2-1l23.p1k vc_5 844 62 5026 5025 C 783 0.00 1217 reject_low 6 ALIGNMENT 179 YS2-1l23.p1k vc_4 845 1094 5871 6127 F 250 91.60 1217 reject_low 5 ALIGNMENT 43 YS2-1l23.q1k vc_3 869 958 2532 2617 F 90 85.56 1347 reject_low 10 ALIGNMENT 0 YS2-1l23.p1k vc_7 62 844 100 99 F 783 0.00 1217 reject_low 7 ALIGNMENT 0 YS2-1l23.p1k vc_3 844 62 2106 2105 C 783 0.00 1217 reject_low 4 ALIGNMENT 0 YS2-1l23.q1k vc_1 822 62 2516 2515 C 761 0.00 1347 reject_low 11 ALIGNMENT 0 YS2-1l23.p1k vc_3 844 62 2473 2472 C 783 0.00 1217 reject_low 14 ALIGNMENT 0 YS2-1l23.q1k vc_3 62 868 2532 2531 F 807 0.00 1347 reject_low 10 ALIGNMENT 0 YS2-1l23.p1k vc_1 844 62 2473 2472 C 783 0.00 1217 reject_low 13 ALIGNMENT 850 YS2-1l24.p1k chr09 1015 32 287623 288618 C 984 96.75 1164 accept 0 ALIGNMENT 794 YS2-1l24.q1k chr09 36 1217 283888 285048 F 1182 90.95 1302 accept 0 ALIGNMENT 0 YS2-1m02.q1k chr02 573 711 646130 646129 F 139 0.00 1380 reject_low 2 ALIGNMENT 942 YS2-1m02.p1k chr01 1208 35 168701 169855 C 1174 94.89 1241 accept 0 ALIGNMENT 22 YS2-1m02.p1k chr02 690 651 646091 646130 C 40 92.50 1241 reject_low 1 ALIGNMENT 0 YS2-1m02.p1k chr02 650 62 646131 646130 C 589 0.00 1241 reject_low 1 ALIGNMENT 0 YS2-1m02.q1k chr02 62 532 646091 646090 F 471 0.00 1380 reject_low 2 ALIGNMENT 0 YS2-1m02.p1k chr02 874 691 646092 646091 C 184 0.00 1241 reject_low 1 ALIGNMENT 22 YS2-1m02.q1k chr02 533 572 646091 646130 F 40 92.50 1380 reject_low 2 ALIGNMENT 798 YS2-1m02.q1k chr01 26 1006 168700 169659 F 981 95.51 1380 accept 0 ALIGNMENT 891 YS2-1m03.q1k chr15 26 1083 265610 266659 F 1058 95.94 1406 accept 0 ALIGNMENT 480 YS2-1m04.q1k chr10 712 27 338173 338859 C 686 90.09 1325 reject_low 2 ALIGNMENT 948 YS2-1m04.p1k chr10 1248 29 457512 458730 C 1220 94.34 1260 accept 0 ALIGNMENT 570 YS2-1m04.q1k chr07 27 718 883143 883834 F 692 94.36 1325 reject_low 1 ALIGNMENT 902 YS2-1m04.q1k chr10 27 1116 453923 455012 F 1090 95.05 1325 accept 0 ALIGNMENT 931 YS2-1m05.q1k chr15 1162 26 584763 585908 C 1137 94.55 1319 accept 0 ALIGNMENT 246 YS2-1m05.p1k chr15 305 680 581452 581825 F 376 90.69 1241 accept 0 ALIGNMENT 882 YS2-1m06.q1k chr07 1096 33 175221 176270 C 1064 95.86 1389 accept 0 ALIGNMENT 903 YS2-1m06.p1k chr07 29 1075 173670 174731 F 1047 96.28 1147 accept 0 ALIGNMENT 89 YS2-1m07.q1k vc_7 421 305 4583 4699 C 117 92.31 1030 reject_low 7 ALIGNMENT 490 YS2-1m07.q1k vc_5 1 701 2556 3251 F 701 90.73 1030 reject_vc 0 ALIGNMENT 0 YS2-1m07.q1k vc_4 303 307 1613 1878 F 5 0.00 1030 reject_low 6 ALIGNMENT 0 YS2-1m07.q1k vc_7 304 303 4700 4922 C 2 0.00 1030 reject_low 7 ALIGNMENT 48 YS2-1m07.q1k vc_7 54 3 6360 6411 C 52 98.08 1030|1,0 reject_low 7 ALIGNMENT 232 YS2-1m07.q1k vc_7 302 53 4923 5172 C 250 97.60 1030|0,1 reject_low 7 ALIGNMENT 199 YS2-1m07.q1k vc_4 308 701 1879 2267 F 394 85.03 1030 reject_low 6 ALIGNMENT 365 YS2-1m07.q1k vc_4 421 1 5232 5654 C 421 95.72 1030 reject_low 2 ALIGNMENT 54 YS2-1m07.q1k vc_4 238 302 1548 1612 F 65 95.38 1030 reject_low 6 ALIGNMENT 0 YS2-1m07.q1k vc_7 53 54 5172 6360 C 0 0.00 1030 reject_low 7 ALIGNMENT 54 YS2-1m07.q1k vc_4 302 238 6275 6339 C 65 95.38 1030 reject_low 9 ALIGNMENT 484 YS2-1m07.q1k vc_7 655 1 1918 2569 C 655 91.91 1030 reject_vc 1 ALIGNMENT 0 YS2-1m07.q1k vc_4 237 62 6340 6339 C 176 0.00 1030 reject_low 9 ALIGNMENT 283 YS2-1m07.q1k vc_1 1 302 2689 2990 F 302 98.01 1030 reject_low 3 ALIGNMENT 283 YS2-1m07.q1k vc_3 1 302 2689 2990 F 302 98.01 1030 reject_low 5 ALIGNMENT 0 YS2-1m07.q1k vc_4 237 62 113 112 C 176 0.00 1030 reject_low 8 ALIGNMENT 54 YS2-1m07.q1k vc_4 302 238 48 112 C 65 95.38 1030 reject_low 8 ALIGNMENT 0 YS2-1m07.q1k vc_4 62 237 1548 1547 F 176 0.00 1030 reject_low 6 ALIGNMENT 283 YS2-1m07.q1k vc_2 1 302 2322 2623 F 302 98.01 1030 reject_low 4 ALIGNMENT 964 YS2-1m08.p1k chr04 35 1185 632660 633810 F 1151 95.74 1413 accept 0 ALIGNMENT 530 YS2-1m08.q1k chr04 708 39 635747 636406 C 670 94.18 1521 accept 0 ALIGNMENT 160 YS2-1m08.p1k chr05 87 971 514038 514921 F 885 73.79 1413 reject_low 1 ALIGNMENT 891 YS2-1m12.q1k chr08 31 1164 479004 480137 F 1134 94.00 1390 accept 0 ALIGNMENT 809 YS2-1m12.p1k chr08 1018 27 481214 482226 C 992 95.16 1195 accept 0 ALIGNMENT 534 YS2-1m13.q1k chr07 48 1013 845837 846792 F 966 86.13 1344 accept 0 ALIGNMENT 160 YS2-1m13.p1k chr07 565 28 850297 850838 C 538 77.70 1099 accept 0 ALIGNMENT 831 YS2-1m14.q1k chr16 23 1067 746264 747310 F 1045 94.74 1369 accept 0 ALIGNMENT 881 YS2-1m14.p1k chr16 1148 34 746699 747821 C 1115 94.89 1163 accept 0 ALIGNMENT 0 YS2-1m15.q1k chr09 306 696 9783 9782 F 391 0.00 1408 reject_low 5 ALIGNMENT 184 YS2-1m15.q1k chr09 305 32 433297 433567 C 274 90.15 1408 reject_low 2 ALIGNMENT 0 YS2-1m15.q1k chr10 306 696 9766 9765 F 391 0.00 1408 reject_low 6 ALIGNMENT 20 YS2-1m15.q1k chr12 188 225 13974 14011 F 38 86.84 1408 reject_low 12 ALIGNMENT 0 YS2-1m15.q1k chr12 696 306 1062294 1062293 C 391 0.00 1408 reject_low 8 ALIGNMENT 174 YS2-1m15.q1k chr03 305 34 307166 307433 C 272 89.34 1408 reject_low 4 ALIGNMENT 0 YS2-1m15.q1k chr12 152 187 13927 13973 F 36 0.00 1408 reject_low 12 ALIGNMENT 0 YS2-1m15.q1k chr07 306 696 7279 7278 F 391 0.00 1408 reject_low 7 ALIGNMENT 0 YS2-1m15.q1k chr03 696 306 307167 307166 C 391 0.00 1408 reject_low 4 ALIGNMENT 174 YS2-1m15.q1k chr10 34 305 9499 9766 F 272 89.34 1408 reject_low 6 ALIGNMENT 73 YS2-1m15.q1k chr02 34 147 8332 8445 F 114 88.60 1408 reject_low 11 ALIGNMENT 130 YS2-1m15.q1k chr15 90 305 12324 12538 F 216 87.50 1408 reject_low 9 ALIGNMENT 0 YS2-1m15.q1k chr12 226 696 14011 14010 F 471 0.00 1408 reject_low 12 ALIGNMENT 0 YS2-1m15.q1k chr15 306 696 12538 12537 F 391 0.00 1408 reject_low 9 ALIGNMENT 694 YS2-1m15.q1k chr01 32 1077 2525 3551 F 1046 90.92 1408 accept 0 ALIGNMENT 84 YS2-1m15.q1k chr12 34 151 13809 13926 F 118 90.68 1408 reject_low 12 ALIGNMENT 166 YS2-1m15.q1k chr07 32 305 7010 7279 F 274 88.32 1408 reject_low 7 ALIGNMENT 174 YS2-1m15.q1k chr09 34 305 9516 9783 F 272 89.34 1408 reject_low 5 ALIGNMENT 0 YS2-1m15.q1k chr02 148 696 8445 8444 F 549 0.00 1408 reject_low 11 ALIGNMENT 175 YS2-1m15.q1k chr11 32 305 2540 2809 F 274 89.42 1408 reject_low 3 ALIGNMENT 144 YS2-1m15.q1k chr12 305 44 1062293 1062547 C 262 87.02 1408 reject_low 8 ALIGNMENT 203 YS2-1m15.q1k chr14 305 34 781286 781556 C 272 92.65 1408 reject_low 1 ALIGNMENT 73 YS2-1m15.q1k chr08 30 151 12649 12770 F 122 87.70 1408 reject_low 10 ALIGNMENT 0 YS2-1m15.q1k chr09 696 306 433298 433297 C 391 0.00 1408 reject_low 2 ALIGNMENT 808 YS2-1m15.p1k chr01 1012 30 5256 6235 C 983 95.73 1158 accept 0 ALIGNMENT 0 YS2-1m15.q1k chr11 306 696 2809 2808 F 391 0.00 1408 reject_low 3 ALIGNMENT 0 YS2-1m15.q1k chr08 152 696 12770 12769 F 545 0.00 1408 reject_low 10 ALIGNMENT 0 YS2-1m15.q1k chr14 696 306 781287 781286 C 391 0.00 1408 reject_low 1 ALIGNMENT 0 YS2-1m15.q1k chr15 62 89 12324 12323 F 28 0.00 1408 reject_low 9 ALIGNMENT 170 YS2-1m16.p1k chr02 740 1092 377438 377789 F 353 83.57 1255 accept 0 ALIGNMENT 253 YS2-1m18.p1k chrm 31 304 79384 79658 F 274 99.64 323 accept 0 ALIGNMENT 0 YS2-1m18.p1k chrm 305 323 79658 79657 F 19 0.00 323 accept 0 ALIGNMENT 280 YS2-1m19.p1k chr15 121 490 735548 735906 F 370 94.32 913 accept 0 ALIGNMENT 815 YS2-1m19.q1k chr15 1005 32 739214 740178 C 974 96.61 1311 accept 0 ALIGNMENT 779 YS2-1m20.q1k chr15 1034 40 421698 422698 C 995 94.37 1235 accept 0 ALIGNMENT 417 YS2-1m20.p1k chr15 157 676 417164 417675 F 520 95.77 1065 accept 0 ALIGNMENT 0 YS2-1m21.p1k vc_1 888 62 2473 2472 C 827 0.00 1285 reject_low 8 ALIGNMENT 0 YS2-1m21.p1k vc_1 888 62 2106 2105 C 827 0.00 1285 reject_low 1 ALIGNMENT 132 YS2-1m21.p1k vc_4 889 1111 5871 6109 F 223 88.34 1285 reject_low 4 ALIGNMENT 26 YS2-1m21.p1k vc_3 919 889 2441 2472 C 31 96.77 1285 reject_low 9 ALIGNMENT 813 YS2-1m21.p1k chr04 32 871 1400402 1401241 F 840 99.29 1285 accept 0 ALIGNMENT 132 YS2-1m21.p1k vc_7 889 1111 100 338 F 223 88.34 1285 reject_low 6 ALIGNMENT 0 YS2-1m21.p1k vc_7 62 888 100 99 F 827 0.00 1285 reject_low 6 ALIGNMENT 795 YS2-1m21.q1k chr04 862 29 1400408 1401241 C 834 99.04 1325 accept 0 ALIGNMENT 0 YS2-1m21.p1k vc_3 888 62 2106 2105 C 827 0.00 1285 reject_low 3 ALIGNMENT 0 YS2-1m21.p1k vc_3 888 62 2473 2472 C 827 0.00 1285 reject_low 9 ALIGNMENT 26 YS2-1m21.p1k vc_1 919 889 2441 2472 C 31 96.77 1285 reject_low 8 ALIGNMENT 0 YS2-1m21.p1k vc_2 888 62 2106 2105 C 827 0.00 1285 reject_low 2 ALIGNMENT 0 YS2-1m21.p1k vc_5 888 62 5026 5025 C 827 0.00 1285 reject_low 5 ALIGNMENT 132 YS2-1m21.p1k vc_7 889 1111 13562 13800 F 223 88.34 1285 reject_low 7 ALIGNMENT 132 YS2-1m21.p1k vc_5 1111 889 4787 5025 C 223 88.34 1285 reject_low 5 ALIGNMENT 132 YS2-1m21.p1k vc_2 1111 889 1867 2105 C 223 88.34 1285 reject_low 2 ALIGNMENT 132 YS2-1m21.p1k vc_3 1111 889 1867 2105 C 223 88.34 1285 reject_low 3 ALIGNMENT 0 YS2-1m21.p1k vc_4 62 888 5871 5870 F 827 0.00 1285 reject_low 4 ALIGNMENT 132 YS2-1m21.p1k vc_1 1111 889 1867 2105 C 223 88.34 1285 reject_low 1 ALIGNMENT 0 YS2-1m21.p1k vc_7 62 888 13562 13561 F 827 0.00 1285 reject_low 7 ALIGNMENT 880 YS2-1m22.q1k chr10 1067 34 170226 171243 C 1034 96.62 1333 accept 0 ALIGNMENT 725 YS2-1m23.q1k chr12 12 935 497511 498422 F 924 95.13 1241 accept 0 ALIGNMENT 160 YS2-1m23.p1k chr09 424 205 69150 69369 C 220 91.36 1232 reject_low 2 ALIGNMENT 0 YS2-1m23.p1k chr12 433 850 64522 64521 F 418 0.00 1232 reject_low 3 ALIGNMENT 95 YS2-1m23.p1k chr12 242 432 65016 65206 F 191 83.77 1232 reject_low 7 ALIGNMENT 0 YS2-1m23.p1k chr12 433 850 65206 65205 F 418 0.00 1232 reject_low 7 ALIGNMENT 129 YS2-1m23.p1k chr12 205 432 64067 64294 F 228 85.96 1232 reject_low 4 ALIGNMENT 0 YS2-1m23.p1k chr09 204 62 69370 69369 C 143 0.00 1232 reject_low 2 ALIGNMENT 0 YS2-1m23.p1k chr12 62 204 64523 64522 F 143 0.00 1232 reject_low 5 ALIGNMENT 0 YS2-1m23.p1k chr12 433 850 64750 64749 F 418 0.00 1232 reject_low 5 ALIGNMENT 0 YS2-1m23.p1k chr11 62 204 617797 617796 F 143 0.00 1232 reject_low 1 ALIGNMENT 877 YS2-1m23.p1k chr12 1205 29 498191 499354 C 1177 93.20 1232 accept 0 ALIGNMENT 114 YS2-1m23.p1k chr12 205 432 64751 64978 F 228 83.77 1232 reject_low 6 ALIGNMENT 135 YS2-1m23.p1k chr12 205 432 64295 64522 F 228 86.84 1232 reject_low 3 ALIGNMENT 0 YS2-1m23.p1k chr11 424 850 618015 618014 F 427 0.00 1232 reject_low 1 ALIGNMENT 166 YS2-1m23.p1k chr11 205 423 617797 618015 F 219 92.24 1232 reject_low 1 ALIGNMENT 0 YS2-1m23.p1k chr09 850 425 69151 69150 C 426 0.00 1232 reject_low 2 ALIGNMENT 0 YS2-1m23.p1k chr12 62 241 65016 65015 F 180 0.00 1232 reject_low 7 ALIGNMENT 123 YS2-1m23.p1k chr12 205 432 64523 64750 F 228 85.09 1232 reject_low 5 ALIGNMENT 0 YS2-1m23.p1k chr12 62 204 64295 64294 F 143 0.00 1232 reject_low 3 ALIGNMENT 0 YS2-1m23.p1k chr12 433 850 64978 64977 F 418 0.00 1232 reject_low 6 ALIGNMENT 0 YS2-1m23.p1k chr12 433 850 64294 64293 F 418 0.00 1232 reject_low 4 ALIGNMENT 0 YS2-1m23.p1k chr12 62 204 64751 64750 F 143 0.00 1232 reject_low 6 ALIGNMENT 0 YS2-1m23.p1k chr12 62 204 64067 64066 F 143 0.00 1232 reject_low 4 ALIGNMENT 0 YS2-1m24.p1k chr12 435 846 64294 64293 F 412 0.00 1221 reject_low 4 ALIGNMENT 976 YS2-1m24.p1k chr12 1175 31 498198 499354 C 1145 95.98 1221 accept 0 ALIGNMENT 0 YS2-1m24.p1k chr12 62 206 64067 64066 F 145 0.00 1221 reject_low 4 ALIGNMENT 0 YS2-1m24.p1k chr09 846 427 69151 69150 C 420 0.00 1221 reject_low 2 ALIGNMENT 0 YS2-1m24.p1k chr11 62 206 617797 617796 F 145 0.00 1221 reject_low 1 ALIGNMENT 0 YS2-1m24.p1k chr12 62 206 64523 64522 F 145 0.00 1221 reject_low 5 ALIGNMENT 0 YS2-1m24.p1k chr09 206 62 69370 69369 C 145 0.00 1221 reject_low 2 ALIGNMENT 0 YS2-1m24.p1k chr12 62 243 65016 65015 F 182 0.00 1221 reject_low 7 ALIGNMENT 0 YS2-1m24.p1k chr12 62 206 64295 64294 F 145 0.00 1221 reject_low 3 ALIGNMENT 114 YS2-1m24.p1k chr12 207 434 64751 64978 F 228 83.77 1221 reject_low 6 ALIGNMENT 0 YS2-1m24.p1k chr11 426 846 618015 618014 F 421 0.00 1221 reject_low 1 ALIGNMENT 135 YS2-1m24.p1k chr12 207 434 64295 64522 F 228 86.84 1221 reject_low 3 ALIGNMENT 166 YS2-1m24.p1k chr11 207 425 617797 618015 F 219 92.24 1221 reject_low 1 ALIGNMENT 95 YS2-1m24.p1k chr12 244 434 65016 65206 F 191 83.77 1221 reject_low 7 ALIGNMENT 160 YS2-1m24.p1k chr09 426 207 69150 69369 C 220 91.36 1221 reject_low 2 ALIGNMENT 0 YS2-1m24.p1k chr12 435 846 64750 64749 F 412 0.00 1221 reject_low 5 ALIGNMENT 129 YS2-1m24.p1k chr12 207 434 64067 64294 F 228 85.96 1221 reject_low 4 ALIGNMENT 0 YS2-1m24.p1k chr12 435 846 64522 64521 F 412 0.00 1221 reject_low 3 ALIGNMENT 0 YS2-1m24.p1k chr12 62 206 64751 64750 F 145 0.00 1221 reject_low 6 ALIGNMENT 0 YS2-1m24.p1k chr12 435 846 64978 64977 F 412 0.00 1221 reject_low 6 ALIGNMENT 123 YS2-1m24.p1k chr12 207 434 64523 64750 F 228 85.09 1221 reject_low 5 ALIGNMENT 0 YS2-1m24.p1k chr12 435 846 65206 65205 F 412 0.00 1221 reject_low 7 ALIGNMENT 986 YS2-1n02.p1k chr16 1186 37 187626 188790 C 1150 96.78 1210 accept 0 ALIGNMENT 828 YS2-1n02.q1k chr16 30 1026 187586 188584 F 997 95.49 1294 accept 0 ALIGNMENT 653 YS2-1n03.q1k chr05 31 723 110879 111571 F 693 99.42 727 accept_chi 1 ALIGNMENT 665 YS2-1n03.p1k chr05 722 30 110879 111571 C 693 99.86 740 accept_chi 0 ALIGNMENT 0 YS2-1n03.p1k chr05 740 723 110880 110879 C 18 0.00 740 accept_chi 0 ALIGNMENT 929 YS2-1n04.p1k chr15 1170 33 343053 344207 C 1138 95.25 1223 accept 0 ALIGNMENT 648 YS2-1n04.q1k chr15 3 761 339270 340030 F 759 96.31 1347 accept 0 ALIGNMENT 812 YS2-1n05.p1k chr16 1081 34 384883 385939 C 1048 93.99 1168 accept 0 ALIGNMENT 766 YS2-1n05.q1k chr16 29 1099 382249 383329 F 1071 91.41 1367 accept 0 ALIGNMENT 889 YS2-1n06.q1k chr04 28 1190 1031338 1032494 F 1163 94.24 1341 accept 0 ALIGNMENT 924 YS2-1n06.p1k chr04 1173 36 1033146 1034289 C 1138 96.31 1174 accept 0 ALIGNMENT 881 YS2-1n08.p1k chr08 1062 29 38858 39903 C 1034 96.13 1189 accept 0 ALIGNMENT 0 YS2-1n08.q1k chr12 235 689 48628 48627 F 455 0.00 1369 reject_low 1 ALIGNMENT 174 YS2-1n08.q1k chr12 24 234 48417 48628 F 211 94.79 1369 reject_low 1 ALIGNMENT 811 YS2-1n08.q1k chr08 24 1046 35812 36828 F 1023 94.53 1369 accept 0 ALIGNMENT 37 YS2-1n09.p1k chr05 29 91 1558 1620 F 63 87.30 1408 reject_low 114 ALIGNMENT 28 YS2-1n09.p1k chr02 29 113 1574 1658 F 85 78.82 1408 reject_low 154 ALIGNMENT 22 YS2-1n09.p1k chr09 29 113 2098 2182 F 85 76.47 1408 reject_low 191 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 2035 2034 F 713 0.00 1408 reject_low 193 ALIGNMENT 35 YS2-1n09.p1k chr12 113 48 1069962 1070027 C 66 86.36 1408 reject_low 126 ALIGNMENT 46 YS2-1n09.p1k chr16 29 113 1787 1871 F 85 85.88 1408 reject_low 69 ALIGNMENT 31 YS2-1n09.p1k chr10 29 88 1829 1888 F 60 85.00 1408 reject_low 151 ALIGNMENT 25 YS2-1n09.p1k chr12 91 29 1076539 1076601 C 63 80.95 1408 reject_low 179 ALIGNMENT 0 YS2-1n09.p1k chr05 826 114 575002 575001 C 713 0.00 1408 reject_low 23 ALIGNMENT 46 YS2-1n09.p1k chr05 113 29 574929 575013 C 85 85.88 1408 reject_low 53 ALIGNMENT 920 YS2-1n09.q1k chr14 1137 38 2191 3301 C 1100 95.09 1357 ambiguous_tel 6 ALIGNMENT 0 YS2-1n09.p1k chr16 114 826 1691 1690 F 713 0.00 1408 reject_low 165 ALIGNMENT 935 YS2-1n09.p1k chr12 1094 29 1068614 1069686 C 1066 96.53 1408 ambiguous_tel 9 ALIGNMENT 46 YS2-1n09.p1k chr07 113 29 1089006 1089090 C 85 85.88 1408 reject_low 55 ALIGNMENT 0 YS2-1n09.p1k chr14 114 826 1854 1853 F 713 0.00 1408 reject_low 65 ALIGNMENT 61 YS2-1n09.p1k chr04 113 29 1530172 1530256 C 85 91.76 1408 reject_low 22 ALIGNMENT 0 YS2-1n09.p1k chr15 826 92 1089504 1089503 C 735 0.00 1408 reject_low 181 ALIGNMENT 0 YS2-1n09.p1k chr04 826 114 1530389 1530388 C 713 0.00 1408 reject_low 131 ALIGNMENT 22 YS2-1n09.p1k chr12 29 113 7486 7570 F 85 76.47 1408 reject_low 194 ALIGNMENT 46 YS2-1n09.p1k chr12 29 113 2095 2179 F 85 85.88 1408 reject_low 58 ALIGNMENT 941 YS2-1n09.p1k chr13 29 1094 2007 3079 F 1066 96.72 1408 ambiguous_tel 0 ALIGNMENT 0 YS2-1n09.p1k chr05 826 114 575218 575217 C 713 0.00 1408 reject_low 85 ALIGNMENT 40 YS2-1n09.p1k chr10 29 113 2009 2093 F 85 83.53 1408 reject_low 94 ALIGNMENT 0 YS2-1n09.p1k chr07 826 114 1089331 1089330 C 713 0.00 1408 reject_low 123 ALIGNMENT 0 YS2-1n09.p1k chr05 92 826 1620 1619 F 735 0.00 1408 reject_low 114 ALIGNMENT 31 YS2-1n09.p1k chr10 29 113 1685 1769 F 85 80.00 1408 reject_low 146 ALIGNMENT 938 YS2-1n09.p1k chr07 1094 29 1087982 1089054 C 1066 96.62 1408 ambiguous_tel 5 ALIGNMENT 0 YS2-1n09.p1k chr10 114 826 2165 2164 F 713 0.00 1408 reject_low 192 ALIGNMENT 0 YS2-1n09.p1k chr16 826 114 945999 945998 C 713 0.00 1408 reject_low 70 ALIGNMENT 31 YS2-1n09.p1k chr05 29 113 1522 1606 F 85 80.00 1408 reject_low 143 ALIGNMENT 61 YS2-1n09.p1k chr16 113 29 946070 946154 C 85 91.76 1408 reject_low 32 ALIGNMENT 0 YS2-1n09.p1k chr16 826 114 946179 946178 C 713 0.00 1408 reject_low 166 ALIGNMENT 0 YS2-1n09.p1k chr12 826 92 1076576 1076575 C 735 0.00 1408 reject_low 139 ALIGNMENT 38 YS2-1n09.p1k chr08 29 82 1775 1828 F 54 90.74 1408 reject_low 113 ALIGNMENT 0 YS2-1n09.p1k chr15 826 92 1089540 1089539 C 735 0.00 1408 reject_low 141 ALIGNMENT 0 YS2-1n09.p1k chr16 826 114 946359 946358 C 713 0.00 1408 reject_low 103 ALIGNMENT 0 YS2-1n09.p1k chr12 826 92 1069913 1069912 C 735 0.00 1408 reject_low 138 ALIGNMENT 49 YS2-1n09.p1k chr09 29 113 2134 2218 F 85 87.06 1408 reject_low 49 ALIGNMENT 25 YS2-1n09.p1k chr14 29 91 1662 1724 F 63 80.95 1408 reject_low 180 ALIGNMENT 40 YS2-1n09.p1k chr16 113 29 946358 946442 C 85 83.53 1408 reject_low 103 ALIGNMENT 34 YS2-1n09.p1k chr05 91 29 575203 575265 C 63 85.71 1408 reject_low 134 ALIGNMENT 0 YS2-1n09.p1k chr16 114 826 1547 1546 F 713 0.00 1408 reject_low 130 ALIGNMENT 0 YS2-1n09.p1k chr14 114 826 1818 1817 F 713 0.00 1408 reject_low 198 ALIGNMENT 52 YS2-1n09.p1k chr09 29 113 1990 2074 F 85 88.24 1408 reject_low 42 ALIGNMENT 35 YS2-1n09.p1k chr16 48 113 1482 1547 F 66 86.36 1408 reject_low 130 ALIGNMENT 40 YS2-1n09.p1k chr09 29 113 2026 2110 F 85 83.53 1408 reject_low 91 ALIGNMENT 0 YS2-1n09.p1k chr09 114 826 1822 1821 F 713 0.00 1408 reject_low 89 ALIGNMENT 22 YS2-1n09.p1k chr16 113 29 946142 946226 C 85 76.47 1408 reject_low 201 ALIGNMENT 801 YS2-1n09.p1k chr06 101 1094 1257 2240 F 994 94.87 1408|6,0 reject_low 18 ALIGNMENT 0 YS2-1n09.p1k chr16 826 114 946143 946142 C 713 0.00 1408 reject_low 201 ALIGNMENT 0 YS2-1n09.p1k chr16 114 826 1763 1762 F 713 0.00 1408 reject_low 68 ALIGNMENT 46 YS2-1n09.p1k chr05 113 29 575037 575121 C 85 85.88 1408 reject_low 54 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 1783 1782 F 713 0.00 1408 reject_low 95 ALIGNMENT 40 YS2-1n09.p1k chr06 29 113 909 993 F 85 83.53 1408 reject_low 86 ALIGNMENT 0 YS2-1n09.p1k chr09 123 826 2311 2310 F 704 0.00 1408 reject_low 80 ALIGNMENT 46 YS2-1n09.p1k chr12 29 113 7630 7714 F 85 85.88 1408 reject_low 60 ALIGNMENT 0 YS2-1n09.p1k chr04 826 114 1530209 1530208 C 713 0.00 1408 reject_low 52 ALIGNMENT 935 YS2-1n09.p1k chr12 29 1094 7666 8738 F 1066 96.53 1408 ambiguous_tel 2 ALIGNMENT 28 YS2-1n09.p1k chr16 29 113 1607 1691 F 85 78.82 1408 reject_low 165 ALIGNMENT 0 YS2-1n09.p1k chr04 826 92 1530375 1530374 C 735 0.00 1408 reject_low 133 ALIGNMENT 32 YS2-1n09.p1k chr10 50 122 2222 2294 F 73 82.19 1408 reject_low 81 ALIGNMENT 0 YS2-1n09.p1k chr14 114 826 1890 1889 F 713 0.00 1408 reject_low 29 ALIGNMENT 0 YS2-1n09.p1k chr05 100 826 2060 2059 F 727 0.00 1408 reject_low 115 ALIGNMENT 0 YS2-1n09.p1k chr05 114 826 1930 1929 F 713 0.00 1408 reject_low 46 ALIGNMENT 0 YS2-1n09.p1k chr08 826 114 560598 560597 C 713 0.00 1408 reject_low 170 ALIGNMENT 935 YS2-1n09.p1k chr12 1094 29 1075277 1076349 C 1066 96.53 1408 ambiguous_tel 10 ALIGNMENT 34 YS2-1n09.p1k chr07 91 29 1089280 1089342 C 63 85.71 1408 reject_low 135 ALIGNMENT 0 YS2-1n09.p1k chr15 826 114 1089266 1089265 C 713 0.00 1408 reject_low 79 ALIGNMENT 43 YS2-1n09.p1k chr12 113 35 1069638 1069716 C 79 86.08 1408 reject_low 77 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 1999 1998 F 713 0.00 1408 reject_low 159 ALIGNMENT 46 YS2-1n09.p1k chr12 113 29 1069746 1069830 C 85 85.88 1408 reject_low 61 ALIGNMENT 36 YS2-1n09.p1k chr08 113 39 560741 560815 C 75 84.00 1408 reject_low 119 ALIGNMENT 37 YS2-1n09.p1k chr09 29 113 2062 2146 F 85 82.35 1408 reject_low 109 ALIGNMENT 49 YS2-1n09.p1k chr08 29 113 1667 1751 F 85 87.06 1408 reject_low 48 ALIGNMENT 55 YS2-1n09.p1k chr02 29 113 2042 2126 F 85 89.41 1408 reject_low 35 ALIGNMENT 37 YS2-1n09.p1k chr08 29 113 1703 1787 F 85 82.35 1408 reject_low 107 ALIGNMENT 37 YS2-1n09.p1k chr12 29 113 1771 1855 F 85 82.35 1408 reject_low 111 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 1802 1801 F 713 0.00 1408 reject_low 120 ALIGNMENT 22 YS2-1n09.p1k chr15 113 29 1089409 1089493 C 85 76.47 1408 reject_low 199 ALIGNMENT 0 YS2-1n09.p1k chr15 826 114 1089446 1089445 C 713 0.00 1408 reject_low 164 ALIGNMENT 36 YS2-1n09.p1k chr06 29 99 1197 1267 F 71 84.51 1408 reject_low 116 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1069963 1069962 C 713 0.00 1408 reject_low 126 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 7426 7425 F 713 0.00 1408 reject_low 97 ALIGNMENT 0 YS2-1n09.p1k chr13 114 826 1983 1982 F 713 0.00 1408 reject_low 28 ALIGNMENT 34 YS2-1n09.p1k chr08 91 29 560727 560789 C 63 85.71 1408 reject_low 136 ALIGNMENT 28 YS2-1n09.p1k chr14 29 113 1698 1782 F 85 78.82 1408 reject_low 163 ALIGNMENT 0 YS2-1n09.p1k chr15 826 114 1089590 1089589 C 713 0.00 1408 reject_low 129 ALIGNMENT 0 YS2-1n09.p1k chr08 114 826 1895 1894 F 713 0.00 1408 reject_low 73 ALIGNMENT 0 YS2-1n09.p1k chr12 826 92 1069877 1069876 C 735 0.00 1408 reject_low 178 ALIGNMENT 37 YS2-1n09.p1k chr05 29 113 1666 1750 F 85 82.35 1408 reject_low 106 ALIGNMENT 40 YS2-1n09.p1k chr12 113 29 1076589 1076673 C 85 83.53 1408 reject_low 99 ALIGNMENT 0 YS2-1n09.p1k chr05 826 114 575038 575037 C 713 0.00 1408 reject_low 54 ALIGNMENT 35 YS2-1n09.p1k chr08 48 113 1650 1715 F 66 86.36 1408 reject_low 124 ALIGNMENT 923 YS2-1n09.q1k chr12 1137 38 2408 3518 C 1100 95.18 1357 ambiguous_tel 1 ALIGNMENT 82 YS2-1n09.p1k chr02 29 113 1934 2018 F 85 100.00 1408 reject_low 20 ALIGNMENT 22 YS2-1n09.p1k chr12 113 29 1076445 1076529 C 85 76.47 1408 reject_low 196 ALIGNMENT 0 YS2-1n09.p1k chr16 826 92 946237 946236 C 735 0.00 1408 reject_low 152 ALIGNMENT 0 YS2-1n09.p1k chr08 826 114 560526 560525 C 713 0.00 1408 reject_low 108 ALIGNMENT 0 YS2-1n09.p1k chr14 114 826 1638 1637 F 713 0.00 1408 reject_low 128 ALIGNMENT 61 YS2-1n09.p1k chr13 29 113 1899 1983 F 85 91.76 1408 reject_low 28 ALIGNMENT 28 YS2-1n09.p1k chr12 113 29 1076481 1076565 C 85 78.82 1408 reject_low 162 ALIGNMENT 873 YS2-1n09.p1k chr10 101 1094 2357 3357 F 994 96.68 1408|6,0 reject_low 16 ALIGNMENT 0 YS2-1n09.p1k chr08 826 114 560742 560741 C 713 0.00 1408 reject_low 119 ALIGNMENT 0 YS2-1n09.p1k chr10 92 826 1711 1710 F 735 0.00 1408 reject_low 184 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 2270 2269 F 713 0.00 1408 reject_low 33 ALIGNMENT 0 YS2-1n09.p1k chr09 107 106 2248 2379 F 0 0.00 1408 reject_low 15 ALIGNMENT 920 YS2-1n09.q1k chr05 38 1137 573590 574700 F 1100 95.09 1357 ambiguous_tel 4 ALIGNMENT 0 YS2-1n09.p1k chr15 826 114 1089410 1089409 C 713 0.00 1408 reject_low 199 ALIGNMENT 40 YS2-1n09.p1k chr12 29 113 7342 7426 F 85 83.53 1408 reject_low 97 ALIGNMENT 73 YS2-1n09.p1k chr02 29 113 1862 1946 F 85 96.47 1408 reject_low 21 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1069927 1069926 C 713 0.00 1408 reject_low 98 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1076410 1076409 C 713 0.00 1408 reject_low 62 ALIGNMENT 0 YS2-1n09.p1k chr05 89 826 1761 1760 F 738 0.00 1408 reject_low 149 ALIGNMENT 43 YS2-1n09.p1k chr15 113 35 1089265 1089343 C 79 86.08 1408 reject_low 79 ALIGNMENT 40 YS2-1n09.p1k chr12 113 29 1069926 1070010 C 85 83.53 1408 reject_low 98 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1069639 1069638 C 713 0.00 1408 reject_low 77 ALIGNMENT 61 YS2-1n09.p1k chr15 113 29 1089337 1089421 C 85 91.76 1408 reject_low 30 ALIGNMENT 49 YS2-1n09.p1k chr05 29 113 1846 1930 F 85 87.06 1408 reject_low 46 ALIGNMENT 0 YS2-1n09.p1k chr08 114 826 1715 1714 F 713 0.00 1408 reject_low 124 ALIGNMENT 22 YS2-1n09.p1k chr05 113 29 575073 575157 C 85 76.47 1408 reject_low 188 ALIGNMENT 0 YS2-1n09.p1k chr16 92 826 1597 1596 F 735 0.00 1408 reject_low 142 ALIGNMENT 28 YS2-1n09.p1k chr15 113 29 1089445 1089529 C 85 78.82 1408 reject_low 164 ALIGNMENT 40 YS2-1n09.p1k chr12 29 113 1699 1783 F 85 83.53 1408 reject_low 95 ALIGNMENT 46 YS2-1n09.p1k chr16 29 113 1679 1763 F 85 85.88 1408 reject_low 68 ALIGNMENT 22 YS2-1n09.p1k chr10 29 113 2081 2165 F 85 76.47 1408 reject_low 192 ALIGNMENT 46 YS2-1n09.p1k chr13 29 113 1863 1947 F 85 85.88 1408 reject_low 63 ALIGNMENT 0 YS2-1n09.p1k chr16 114 826 1871 1870 F 713 0.00 1408 reject_low 69 ALIGNMENT 40 YS2-1n09.p1k chr16 113 29 946394 946478 C 85 83.53 1408 reject_low 104 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 1819 1818 F 713 0.00 1408 reject_low 96 ALIGNMENT 0 YS2-1n09.p1k chr07 826 114 1089079 1089078 C 713 0.00 1408 reject_low 24 ALIGNMENT 32 YS2-1n09.p1k chr09 50 122 2239 2311 F 73 82.19 1408 reject_low 80 ALIGNMENT 0 YS2-1n09.p1k chr09 114 826 2074 2073 F 713 0.00 1408 reject_low 42 ALIGNMENT 43 YS2-1n09.p1k chr09 29 113 1774 1858 F 85 84.71 1408 reject_low 74 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1076374 1076373 C 713 0.00 1408 reject_low 19 ALIGNMENT 0 YS2-1n09.p1k chr05 114 826 1606 1605 F 713 0.00 1408 reject_low 143 ALIGNMENT 61 YS2-1n09.p1k chr05 113 29 575001 575085 C 85 91.76 1408 reject_low 23 ALIGNMENT 25 YS2-1n09.p1k chr04 91 29 1530338 1530400 C 63 80.95 1408 reject_low 173 ALIGNMENT 0 YS2-1n09.p1k chr09 100 826 2384 2383 F 727 0.00 1408 reject_low 117 ALIGNMENT 43 YS2-1n09.p1k chr12 113 35 1076301 1076379 C 79 86.08 1408 reject_low 78 ALIGNMENT 0 YS2-1n09.p1k chr10 114 826 2129 2128 F 713 0.00 1408 reject_low 110 ALIGNMENT 25 YS2-1n09.p1k chr07 91 29 1089244 1089306 C 63 80.95 1408 reject_low 175 ALIGNMENT 0 YS2-1n09.p1k chr08 826 92 560692 560691 C 735 0.00 1408 reject_low 176 ALIGNMENT 0 YS2-1n09.p1k chr16 826 114 946071 946070 C 713 0.00 1408 reject_low 32 ALIGNMENT 920 YS2-1n09.q1k chr07 38 1137 1087667 1088777 F 1100 95.09 1357 ambiguous_tel 5 ALIGNMENT 49 YS2-1n09.p1k chr10 29 113 2117 2201 F 85 87.06 1408 reject_low 50 ALIGNMENT 0 YS2-1n09.p1k chr07 826 114 1089115 1089114 C 713 0.00 1408 reject_low 56 ALIGNMENT 0 YS2-1n09.p1k chr08 826 114 560562 560561 C 713 0.00 1408 reject_low 34 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1069711 1069710 C 713 0.00 1408 reject_low 27 ALIGNMENT 0 YS2-1n09.p1k chr09 114 826 2110 2109 F 713 0.00 1408 reject_low 91 ALIGNMENT 46 YS2-1n09.p1k chr12 29 113 1987 2071 F 85 85.88 1408 reject_low 57 ALIGNMENT 935 YS2-1n09.p1k chr12 29 1094 2131 3203 F 1066 96.53 1408 ambiguous_tel 1 ALIGNMENT 0 YS2-1n09.p1k chr07 826 114 1089295 1089294 C 713 0.00 1408 reject_low 87 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1076626 1076625 C 713 0.00 1408 reject_low 127 ALIGNMENT 22 YS2-1n09.p1k chr16 29 113 1643 1727 F 85 76.47 1408 reject_low 200 ALIGNMENT 34 YS2-1n09.p1k chr14 29 91 1626 1688 F 63 85.71 1408 reject_low 140 ALIGNMENT 31 YS2-1n09.p1k chr05 29 88 1702 1761 F 60 85.00 1408 reject_low 149 ALIGNMENT 0 YS2-1n09.p1k chr09 114 826 2218 2217 F 713 0.00 1408 reject_low 49 ALIGNMENT 0 YS2-1n09.p1k chr09 114 826 2182 2181 F 713 0.00 1408 reject_low 191 ALIGNMENT 22 YS2-1n09.p1k chr13 29 113 1827 1911 F 85 76.47 1408 reject_low 197 ALIGNMENT 935 YS2-1n09.p1k chr16 1094 29 944974 946046 C 1066 96.53 1408 ambiguous_tel 3 ALIGNMENT 37 YS2-1n09.p1k chr10 29 113 2045 2129 F 85 82.35 1408 reject_low 110 ALIGNMENT 920 YS2-1n09.q1k chr13 1137 38 2284 3394 C 1100 95.09 1357 ambiguous_tel 0 ALIGNMENT 61 YS2-1n09.p1k chr16 29 113 1715 1799 F 85 91.76 1408 reject_low 31 ALIGNMENT 52 YS2-1n09.p1k chr12 29 113 1843 1927 F 85 88.24 1408 reject_low 45 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1069747 1069746 C 713 0.00 1408 reject_low 61 ALIGNMENT 46 YS2-1n09.p1k chr02 29 91 1646 1708 F 63 92.06 1408 reject_low 72 ALIGNMENT 26 YS2-1n09.p1k chr10 48 91 1668 1711 F 44 88.64 1408 reject_low 184 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 2198 2197 F 713 0.00 1408 reject_low 36 ALIGNMENT 0 YS2-1n09.p1k chr12 92 826 1941 1940 F 735 0.00 1408 reject_low 167 ALIGNMENT 28 YS2-1n09.p1k chr12 29 113 7450 7534 F 85 78.82 1408 reject_low 160 ALIGNMENT 0 YS2-1n09.p1k chr09 114 826 1858 1857 F 713 0.00 1408 reject_low 74 ALIGNMENT 0 YS2-1n09.p1k chr16 826 114 946431 946430 C 713 0.00 1408 reject_low 148 ALIGNMENT 920 YS2-1n09.q1k chr06 1137 38 1445 2555 C 1100 95.09 1357 reject_low 18 ALIGNMENT 61 YS2-1n09.p1k chr12 113 29 1076373 1076457 C 85 91.76 1408 reject_low 19 ALIGNMENT 0 YS2-1n09.p1k chr05 826 114 575254 575253 C 713 0.00 1408 reject_low 122 ALIGNMENT 0 YS2-1n09.p1k chr05 826 92 575168 575167 C 735 0.00 1408 reject_low 174 ALIGNMENT 0 YS2-1n09.p1k chr16 826 114 946323 946322 C 713 0.00 1408 reject_low 112 ALIGNMENT 0 YS2-1n09.p1k chr16 114 826 1583 1582 F 713 0.00 1408 reject_low 102 ALIGNMENT 36 YS2-1n09.p1k chr09 29 99 2314 2384 F 71 84.51 1408 reject_low 117 ALIGNMENT 0 YS2-1n09.p1k chr07 826 92 1089281 1089280 C 735 0.00 1408 reject_low 135 ALIGNMENT 0 YS2-1n09.p1k chr05 114 826 1714 1713 F 713 0.00 1408 reject_low 84 ALIGNMENT 0 YS2-1n09.p1k chr07 826 114 1089007 1089006 C 713 0.00 1408 reject_low 55 ALIGNMENT 43 YS2-1n09.p1k chr04 113 35 1530100 1530178 C 79 86.08 1408 reject_low 76 ALIGNMENT 22 YS2-1n09.p1k chr06 29 113 981 1065 F 85 76.47 1408 reject_low 189 ALIGNMENT 28 YS2-1n09.p1k chr16 113 29 946178 946262 C 85 78.82 1408 reject_low 166 ALIGNMENT 0 YS2-1n09.p1k chr09 114 826 1894 1893 F 713 0.00 1408 reject_low 90 ALIGNMENT 917 YS2-1n09.q1k chr10 1137 38 2562 3672 C 1100 95.00 1357 reject_low 16 ALIGNMENT 0 YS2-1n09.p1k chr05 114 826 1894 1893 F 713 0.00 1408 reject_low 187 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 2306 2305 F 713 0.00 1408 reject_low 105 ALIGNMENT 26 YS2-1n09.p1k chr09 48 91 1685 1728 F 44 88.64 1408 reject_low 183 ALIGNMENT 34 YS2-1n09.p1k chr15 91 29 1089539 1089601 C 63 85.71 1408 reject_low 141 ALIGNMENT 0 YS2-1n09.p1k chr06 114 826 1029 1028 F 713 0.00 1408 reject_low 40 ALIGNMENT 0 YS2-1n09.p1k chr08 114 826 1751 1750 F 713 0.00 1408 reject_low 48 ALIGNMENT 32 YS2-1n09.p1k chr16 113 48 946430 946495 C 66 84.85 1408 reject_low 148 ALIGNMENT 80 YS2-1n09.p1k chr10 29 111 2153 2235 F 83 100.00 1408|0,5 reject_low 16 ALIGNMENT 913 YS2-1n09.q1k chr08 38 1115 559112 560199 F 1078 95.45 1357 ambiguous_tel 13 ALIGNMENT 55 YS2-1n09.p1k chr16 113 29 946250 946334 C 85 89.41 1408 reject_low 38 ALIGNMENT 28 YS2-1n09.p1k chr04 113 29 1530280 1530364 C 85 78.82 1408 reject_low 155 ALIGNMENT 916 YS2-1n09.q1k chr05 1120 38 2273 3365 C 1083 95.38 1357 reject_low 17 ALIGNMENT 0 YS2-1n09.p1k chr09 114 826 2002 2001 F 713 0.00 1408 reject_low 41 ALIGNMENT 40 YS2-1n09.p1k chr05 113 29 575217 575301 C 85 83.53 1408 reject_low 85 ALIGNMENT 58 YS2-1n09.p1k chr02 29 113 2186 2270 F 85 90.59 1408 reject_low 33 ALIGNMENT 40 YS2-1n09.p1k chr09 29 113 1738 1822 F 85 83.53 1408 reject_low 89 ALIGNMENT 0 YS2-1n09.p1k chr08 114 826 1787 1786 F 713 0.00 1408 reject_low 107 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1076590 1076589 C 713 0.00 1408 reject_low 99 ALIGNMENT 923 YS2-1n09.q1k chr12 1137 38 7943 9053 C 1100 95.18 1357 ambiguous_tel 2 ALIGNMENT 46 YS2-1n09.p1k chr04 113 29 1530208 1530292 C 85 85.88 1408 reject_low 52 ALIGNMENT 35 YS2-1n09.p1k chr12 113 48 1076625 1076690 C 66 86.36 1408 reject_low 127 ALIGNMENT 55 YS2-1n09.p1k chr05 29 113 1774 1858 F 85 89.41 1408 reject_low 37 ALIGNMENT 920 YS2-1n09.q1k chr15 38 1137 1087926 1089036 F 1100 95.09 1357 ambiguous_tel 11 ALIGNMENT 0 YS2-1n09.p1k chr05 114 826 1750 1749 F 713 0.00 1408 reject_low 106 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 1874 1873 F 713 0.00 1408 reject_low 51 ALIGNMENT 34 YS2-1n09.p1k chr12 29 91 7378 7440 F 63 85.71 1408 reject_low 137 ALIGNMENT 25 YS2-1n09.p1k chr12 29 91 7414 7476 F 63 80.95 1408 reject_low 177 ALIGNMENT 25 YS2-1n09.p1k chr09 29 113 1954 2038 F 85 77.65 1408 reject_low 171 ALIGNMENT 23 YS2-1n09.p1k chr08 113 74 560777 560816 C 40 87.50 1408 reject_low 185 ALIGNMENT 930 YS2-1n09.p1k chr08 1094 29 559427 560501 C 1066 96.44 1408 ambiguous_tel 13 ALIGNMENT 22 YS2-1n09.p1k chr05 29 113 1810 1894 F 85 76.47 1408 reject_low 187 ALIGNMENT 0 YS2-1n09.p1k chr10 114 826 1877 1876 F 713 0.00 1408 reject_low 93 ALIGNMENT 938 YS2-1n09.p1k chr16 29 1094 1823 2895 F 1066 96.62 1408 ambiguous_tel 7 ALIGNMENT 49 YS2-1n09.p1k chr06 29 113 1017 1101 F 85 87.06 1408 reject_low 47 ALIGNMENT 80 YS2-1n09.p1k chr05 29 111 1882 1964 F 83 100.00 1408|0,5 reject_low 17 ALIGNMENT 40 YS2-1n09.p1k chr07 113 29 1089294 1089378 C 85 83.53 1408 reject_low 87 ALIGNMENT 46 YS2-1n09.p1k chr14 29 113 1770 1854 F 85 85.88 1408 reject_low 65 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 1658 1657 F 713 0.00 1408 reject_low 154 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 1855 1854 F 713 0.00 1408 reject_low 111 ALIGNMENT 0 YS2-1n09.p1k chr12 92 826 7440 7439 F 735 0.00 1408 reject_low 137 ALIGNMENT 28 YS2-1n09.p1k chr05 113 29 575109 575193 C 85 78.82 1408 reject_low 156 ALIGNMENT 0 YS2-1n09.p1k chr12 92 826 7476 7475 F 735 0.00 1408 reject_low 177 ALIGNMENT 935 YS2-1n09.p1k chr04 1094 29 1529076 1530148 C 1066 96.53 1408 ambiguous_tel 8 ALIGNMENT 40 YS2-1n09.p1k chr02 29 113 2294 2378 F 85 83.53 1408 reject_low 83 ALIGNMENT 0 YS2-1n09.p1k chr16 826 114 946251 946250 C 713 0.00 1408 reject_low 38 ALIGNMENT 31 YS2-1n09.p1k chr05 29 113 1594 1678 F 85 80.00 1408 reject_low 144 ALIGNMENT 0 YS2-1n09.p1k chr06 114 826 1101 1100 F 713 0.00 1408 reject_low 47 ALIGNMENT 28 YS2-1n09.p1k chr08 113 29 560633 560717 C 85 78.82 1408 reject_low 158 ALIGNMENT 0 YS2-1n09.p1k chr04 826 114 1530281 1530280 C 713 0.00 1408 reject_low 155 ALIGNMENT 0 YS2-1n09.p1k chr07 826 114 1089187 1089186 C 713 0.00 1408 reject_low 157 ALIGNMENT 25 YS2-1n09.p1k chr15 91 29 1089503 1089565 C 63 80.95 1408 reject_low 181 ALIGNMENT 0 YS2-1n09.p1k chr05 114 826 1858 1857 F 713 0.00 1408 reject_low 37 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 2107 2106 F 713 0.00 1408 reject_low 25 ALIGNMENT 0 YS2-1n09.p1k chr09 89 826 1905 1904 F 738 0.00 1408 reject_low 150 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 2126 2125 F 713 0.00 1408 reject_low 35 ALIGNMENT 913 YS2-1n09.q1k chr02 1115 38 2632 3719 C 1078 95.45 1357 ambiguous_tel 12 ALIGNMENT 35 YS2-1n09.p1k chr02 48 113 1485 1550 F 66 86.36 1408 reject_low 121 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1076446 1076445 C 713 0.00 1408 reject_low 196 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 7570 7569 F 713 0.00 1408 reject_low 194 ALIGNMENT 58 YS2-1n09.p1k chr08 113 29 560561 560645 C 85 90.59 1408 reject_low 34 ALIGNMENT 920 YS2-1n09.q1k chr04 38 1137 1528761 1529871 F 1100 95.09 1357 ambiguous_tel 8 ALIGNMENT 0 YS2-1n09.p1k chr02 92 826 1600 1599 F 735 0.00 1408 reject_low 132 ALIGNMENT 46 YS2-1n09.p1k chr12 29 113 7522 7606 F 85 85.88 1408 reject_low 59 ALIGNMENT 40 YS2-1n09.p1k chr05 29 113 1630 1714 F 85 83.53 1408 reject_low 84 ALIGNMENT 25 YS2-1n09.p1k chr10 29 113 1937 2021 F 85 77.65 1408 reject_low 172 ALIGNMENT 37 YS2-1n09.p1k chr02 29 113 2222 2306 F 85 82.35 1408 reject_low 105 ALIGNMENT 0 YS2-1n09.p1k chr14 92 826 1724 1723 F 735 0.00 1408 reject_low 180 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 7390 7389 F 713 0.00 1408 reject_low 125 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1069819 1069818 C 713 0.00 1408 reject_low 161 ALIGNMENT 0 YS2-1n09.p1k chr13 114 826 2055 2054 F 713 0.00 1408 reject_low 64 ALIGNMENT 935 YS2-1n09.p1k chr15 1094 29 1088241 1089313 C 1066 96.53 1408 ambiguous_tel 11 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 1550 1549 F 713 0.00 1408 reject_low 121 ALIGNMENT 80 YS2-1n09.p1k chr06 29 111 1053 1135 F 83 100.00 1408|0,5 reject_low 18 ALIGNMENT 46 YS2-1n09.p1k chr02 29 113 1790 1874 F 85 85.88 1408 reject_low 51 ALIGNMENT 25 YS2-1n09.p1k chr16 29 91 1571 1633 F 63 80.95 1408 reject_low 182 ALIGNMENT 0 YS2-1n09.p1k chr08 826 114 560454 560453 C 713 0.00 1408 reject_low 88 ALIGNMENT 0 YS2-1n09.p1k chr04 826 114 1530173 1530172 C 713 0.00 1408 reject_low 22 ALIGNMENT 40 YS2-1n09.p1k chr09 29 113 1810 1894 F 85 83.53 1408 reject_low 90 ALIGNMENT 0 YS2-1n09.p1k chr16 826 114 946107 946106 C 713 0.00 1408 reject_low 71 ALIGNMENT 0 YS2-1n09.p1k chr16 92 826 1633 1632 F 735 0.00 1408 reject_low 182 ALIGNMENT 31 YS2-1n09.p1k chr16 91 29 946236 946298 C 63 84.13 1408 reject_low 152 ALIGNMENT 61 YS2-1n09.p1k chr12 113 29 1069710 1069794 C 85 91.76 1408 reject_low 27 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 1694 1693 F 713 0.00 1408 reject_low 169 ALIGNMENT 0 YS2-1n09.p1k chr16 826 114 946395 946394 C 713 0.00 1408 reject_low 104 ALIGNMENT 0 YS2-1n09.p1k chr04 826 114 1530245 1530244 C 713 0.00 1408 reject_low 186 ALIGNMENT 0 YS2-1n09.p1k chr10 89 826 1888 1887 F 738 0.00 1408 reject_low 151 ALIGNMENT 22 YS2-1n09.p1k chr04 113 29 1530244 1530328 C 85 76.47 1408 reject_low 186 ALIGNMENT 0 YS2-1n09.p1k chr10 100 826 2367 2366 F 727 0.00 1408 reject_low 118 ALIGNMENT 52 YS2-1n09.p1k chr10 29 113 1973 2057 F 85 88.24 1408 reject_low 44 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 7714 7713 F 713 0.00 1408 reject_low 60 ALIGNMENT 52 YS2-1n09.p1k chr02 29 113 1826 1910 F 85 88.24 1408 reject_low 39 ALIGNMENT 861 YS2-1n09.p1k chr05 101 1094 2050 3050 F 994 96.28 1408|6,0 reject_low 17 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 7606 7605 F 713 0.00 1408 reject_low 59 ALIGNMENT 0 YS2-1n09.p1k chr04 826 114 1530101 1530100 C 713 0.00 1408 reject_low 76 ALIGNMENT 43 YS2-1n09.p1k chr08 29 113 1811 1895 F 85 84.71 1408 reject_low 73 ALIGNMENT 0 YS2-1n09.p1k chr05 114 826 1678 1677 F 713 0.00 1408 reject_low 144 ALIGNMENT 0 YS2-1n09.p1k chr15 826 114 1089374 1089373 C 713 0.00 1408 reject_low 67 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 2378 2377 F 713 0.00 1408 reject_low 83 ALIGNMENT 0 YS2-1n09.p1k chr05 107 106 1960 2055 F 0 0.00 1408 reject_low 17 ALIGNMENT 46 YS2-1n09.p1k chr07 113 29 1089114 1089198 C 85 85.88 1408 reject_low 56 ALIGNMENT 0 YS2-1n09.p1k chr06 114 826 957 956 F 713 0.00 1408 reject_low 153 ALIGNMENT 938 YS2-1n09.p1k chr14 29 1094 1914 2986 F 1066 96.62 1408 ambiguous_tel 6 ALIGNMENT 0 YS2-1n09.p1k chr14 92 826 1688 1687 F 735 0.00 1408 reject_low 140 ALIGNMENT 0 YS2-1n09.p1k chr12 826 92 1076540 1076539 C 735 0.00 1408 reject_low 179 ALIGNMENT 52 YS2-1n09.p1k chr10 29 113 1901 1985 F 85 88.24 1408 reject_low 43 ALIGNMENT 886 YS2-1n09.p1k chr08 29 1094 1847 2935 F 1066 95.12 1408 reject_low 14 ALIGNMENT 61 YS2-1n09.p1k chr12 29 113 2023 2107 F 85 91.76 1408 reject_low 25 ALIGNMENT 40 YS2-1n09.p1k chr12 29 113 1735 1819 F 85 83.53 1408 reject_low 96 ALIGNMENT 40 YS2-1n09.p1k chr10 29 113 1793 1877 F 85 83.53 1408 reject_low 93 ALIGNMENT 34 YS2-1n09.p1k chr04 91 29 1530374 1530436 C 63 85.71 1408 reject_low 133 ALIGNMENT 22 YS2-1n09.p1k chr07 113 29 1089150 1089234 C 85 76.47 1408 reject_low 190 ALIGNMENT 35 YS2-1n09.p1k chr15 113 48 1089589 1089654 C 66 86.36 1408 reject_low 129 ALIGNMENT 34 YS2-1n09.p1k chr02 29 113 1718 1802 F 85 81.18 1408 reject_low 120 ALIGNMENT 0 YS2-1n09.p1k chr05 92 826 1548 1547 F 735 0.00 1408 reject_low 168 ALIGNMENT 0 YS2-1n09.p1k chr13 114 826 1911 1910 F 713 0.00 1408 reject_low 197 ALIGNMENT 0 YS2-1n09.p1k chr06 114 826 993 992 F 713 0.00 1408 reject_low 86 ALIGNMENT 0 YS2-1n09.p1k chr10 114 826 1769 1768 F 713 0.00 1408 reject_low 146 ALIGNMENT 0 YS2-1n09.p1k chr08 826 114 560778 560777 C 713 0.00 1408 reject_low 185 ALIGNMENT 40 YS2-1n09.p1k chr16 29 113 1499 1583 F 85 83.53 1408 reject_low 102 ALIGNMENT 0 YS2-1n09.p1k chr14 114 826 1962 1961 F 713 0.00 1408 reject_low 66 ALIGNMENT 40 YS2-1n09.p1k chr10 29 113 1721 1805 F 85 83.53 1408 reject_low 92 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 7642 7641 F 713 0.00 1408 reject_low 26 ALIGNMENT 35 YS2-1n09.p1k chr12 48 113 7325 7390 F 66 86.36 1408 reject_low 125 ALIGNMENT 0 YS2-1n09.p1k chr10 107 106 2231 2362 F 0 0.00 1408 reject_low 16 ALIGNMENT 35 YS2-1n09.p1k chr07 113 48 1089330 1089395 C 66 86.36 1408 reject_low 123 ALIGNMENT 0 YS2-1n09.p1k chr05 826 92 575204 575203 C 735 0.00 1408 reject_low 134 ALIGNMENT 34 YS2-1n09.p1k chr16 29 91 1535 1597 F 63 85.71 1408 reject_low 142 ALIGNMENT 35 YS2-1n09.p1k chr05 113 48 575253 575318 C 66 86.36 1408 reject_low 122 ALIGNMENT 52 YS2-1n09.p1k chr09 29 113 1918 2002 F 85 88.24 1408 reject_low 41 ALIGNMENT 37 YS2-1n09.p1k chr08 113 29 560525 560609 C 85 82.35 1408 reject_low 108 ALIGNMENT 80 YS2-1n09.p1k chr09 29 111 2170 2252 F 83 100.00 1408|0,5 reject_low 15 ALIGNMENT 0 YS2-1n09.p1k chr10 114 826 1805 1804 F 713 0.00 1408 reject_low 92 ALIGNMENT 22 YS2-1n09.p1k chr14 29 113 1734 1818 F 85 76.47 1408 reject_low 198 ALIGNMENT 0 YS2-1n09.p1k chr05 826 114 575074 575073 C 713 0.00 1408 reject_low 188 ALIGNMENT 34 YS2-1n09.p1k chr02 29 91 1538 1600 F 63 85.71 1408 reject_low 132 ALIGNMENT 0 YS2-1n09.p1k chr04 826 92 1530339 1530338 C 735 0.00 1408 reject_low 173 ALIGNMENT 0 YS2-1n09.p1k chr15 826 114 1089338 1089337 C 713 0.00 1408 reject_low 30 ALIGNMENT 28 YS2-1n09.p1k chr12 29 91 1879 1941 F 63 82.54 1408 reject_low 167 ALIGNMENT 0 YS2-1n09.p1k chr07 826 92 1089245 1089244 C 735 0.00 1408 reject_low 175 ALIGNMENT 0 YS2-1n09.p1k chr05 826 114 574930 574929 C 713 0.00 1408 reject_low 53 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 1910 1909 F 713 0.00 1408 reject_low 39 ALIGNMENT 34 YS2-1n09.p1k chr04 113 49 1530388 1530452 C 65 86.15 1408 reject_low 131 ALIGNMENT 0 YS2-1n09.p1k chr08 826 92 560728 560727 C 735 0.00 1408 reject_low 136 ALIGNMENT 0 YS2-1n09.p1k chr08 826 114 560634 560633 C 713 0.00 1408 reject_low 158 ALIGNMENT 0 YS2-1n09.p1k chr10 114 826 2093 2092 F 713 0.00 1408 reject_low 94 ALIGNMENT 0 YS2-1n09.p1k chr06 100 826 1267 1266 F 727 0.00 1408 reject_low 116 ALIGNMENT 0 YS2-1n09.p1k chr10 114 826 1985 1984 F 713 0.00 1408 reject_low 43 ALIGNMENT 30 YS2-1n09.p1k chr05 49 91 1506 1548 F 43 93.02 1408 reject_low 168 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 1586 1585 F 713 0.00 1408 reject_low 82 ALIGNMENT 35 YS2-1n09.p1k chr14 48 113 1573 1638 F 66 86.36 1408 reject_low 128 ALIGNMENT 46 YS2-1n09.p1k chr15 113 29 1089373 1089457 C 85 85.88 1408 reject_low 67 ALIGNMENT 22 YS2-1n09.p1k chr12 113 29 1069782 1069866 C 85 76.47 1408 reject_low 195 ALIGNMENT 46 YS2-1n09.p1k chr14 29 113 1878 1962 F 85 85.88 1408 reject_low 66 ALIGNMENT 36 YS2-1n09.p1k chr10 29 99 2297 2367 F 71 84.51 1408 reject_low 118 ALIGNMENT 37 YS2-1n09.p1k chr16 113 29 946322 946406 C 85 82.35 1408 reject_low 112 ALIGNMENT 870 YS2-1n09.p1k chr09 101 1094 2374 3374 F 994 96.58 1408|6,0 reject_low 15 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 2018 2017 F 713 0.00 1408 reject_low 20 ALIGNMENT 25 YS2-1n09.p1k chr08 91 29 560691 560753 C 63 80.95 1408 reject_low 176 ALIGNMENT 0 YS2-1n09.p1k chr13 114 826 1947 1946 F 713 0.00 1408 reject_low 63 ALIGNMENT 0 YS2-1n09.p1k chr05 826 114 575110 575109 C 713 0.00 1408 reject_low 156 ALIGNMENT 0 YS2-1n09.p1k chr10 114 826 1841 1840 F 713 0.00 1408 reject_low 75 ALIGNMENT 0 YS2-1n09.p1k chr14 114 826 1674 1673 F 713 0.00 1408 reject_low 100 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1069783 1069782 C 713 0.00 1408 reject_low 195 ALIGNMENT 29 YS2-1n09.p1k chr06 48 113 892 957 F 66 83.33 1408 reject_low 153 ALIGNMENT 25 YS2-1n09.p1k chr08 113 29 560597 560681 C 85 77.65 1408 reject_low 170 ALIGNMENT 0 YS2-1n09.p1k chr10 114 826 2057 2056 F 713 0.00 1408 reject_low 44 ALIGNMENT 0 YS2-1n09.p1k chr16 114 826 1727 1726 F 713 0.00 1408 reject_low 200 ALIGNMENT 0 YS2-1n09.p1k chr07 826 114 1089151 1089150 C 713 0.00 1408 reject_low 190 ALIGNMENT 46 YS2-1n09.p1k chr16 113 29 946106 946190 C 85 85.88 1408 reject_low 71 ALIGNMENT 34 YS2-1n09.p1k chr12 91 29 1069912 1069974 C 63 85.71 1408 reject_low 138 ALIGNMENT 55 YS2-1n09.p1k chr02 29 113 2114 2198 F 85 89.41 1408 reject_low 36 ALIGNMENT 0 YS2-1n09.p1k chr09 114 826 1786 1785 F 713 0.00 1408 reject_low 145 ALIGNMENT 0 YS2-1n09.p1k chr02 114 826 1946 1945 F 713 0.00 1408 reject_low 21 ALIGNMENT 28 YS2-1n09.p1k chr12 113 29 1069818 1069902 C 85 78.82 1408 reject_low 161 ALIGNMENT 0 YS2-1n09.p1k chr08 83 826 1828 1827 F 744 0.00 1408 reject_low 113 ALIGNMENT 32 YS2-1n09.p1k chr12 48 113 1682 1747 F 66 84.85 1408 reject_low 147 ALIGNMENT 31 YS2-1n09.p1k chr09 29 88 1846 1905 F 60 85.00 1408 reject_low 150 ALIGNMENT 920 YS2-1n09.q1k chr09 1137 38 2579 3689 C 1100 95.09 1357 reject_low 15 ALIGNMENT 0 YS2-1n09.p1k chr09 92 826 1728 1727 F 735 0.00 1408 reject_low 183 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1076302 1076301 C 713 0.00 1408 reject_low 78 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 7534 7533 F 713 0.00 1408 reject_low 160 ALIGNMENT 0 YS2-1n09.p1k chr06 107 106 1131 1262 F 0 0.00 1408 reject_low 18 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 2071 2070 F 713 0.00 1408 reject_low 57 ALIGNMENT 930 YS2-1n09.p1k chr02 29 1094 2330 3404 F 1066 96.44 1408 ambiguous_tel 12 ALIGNMENT 920 YS2-1n09.q1k chr12 38 1137 1074962 1076072 F 1100 95.09 1357 reject_low 19 ALIGNMENT 61 YS2-1n09.p1k chr12 29 113 7558 7642 F 85 91.76 1408 reject_low 26 ALIGNMENT 25 YS2-1n09.p1k chr05 91 29 575167 575229 C 63 80.95 1408 reject_low 174 ALIGNMENT 0 YS2-1n09.p1k chr15 826 114 1089554 1089553 C 713 0.00 1408 reject_low 101 ALIGNMENT 34 YS2-1n09.p1k chr12 91 29 1076575 1076637 C 63 85.71 1408 reject_low 139 ALIGNMENT 938 YS2-1n09.p1k chr05 1094 29 573905 574977 C 1066 96.62 1408 ambiguous_tel 4 ALIGNMENT 895 YS2-1n09.q1k chr08 1120 38 2154 3250 C 1083 94.83 1357 reject_low 14 ALIGNMENT 28 YS2-1n09.p1k chr07 113 29 1089186 1089270 C 85 78.82 1408 reject_low 157 ALIGNMENT 0 YS2-1n09.p1k chr10 114 826 2201 2200 F 713 0.00 1408 reject_low 50 ALIGNMENT 0 YS2-1n09.p1k chr10 114 826 2021 2020 F 713 0.00 1408 reject_low 172 ALIGNMENT 920 YS2-1n09.q1k chr16 1137 38 2100 3210 C 1100 95.09 1357 ambiguous_tel 7 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 1927 1926 F 713 0.00 1408 reject_low 45 ALIGNMENT 46 YS2-1n09.p1k chr12 113 29 1076409 1076493 C 85 85.88 1408 reject_low 62 ALIGNMENT 36 YS2-1n09.p1k chr05 29 99 1990 2060 F 71 84.51 1408 reject_low 115 ALIGNMENT 31 YS2-1n09.p1k chr09 29 113 1702 1786 F 85 80.00 1408 reject_low 145 ALIGNMENT 25 YS2-1n09.p1k chr02 29 113 1610 1694 F 85 77.65 1408 reject_low 169 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 1747 1746 F 713 0.00 1408 reject_low 147 ALIGNMENT 46 YS2-1n09.p1k chr13 29 113 1971 2055 F 85 85.88 1408 reject_low 64 ALIGNMENT 40 YS2-1n09.p1k chr14 29 113 1590 1674 F 85 83.53 1408 reject_low 100 ALIGNMENT 0 YS2-1n09.p1k chr12 114 826 2179 2178 F 713 0.00 1408 reject_low 58 ALIGNMENT 0 YS2-1n09.p1k chr16 114 826 1799 1798 F 713 0.00 1408 reject_low 31 ALIGNMENT 40 YS2-1n09.p1k chr02 29 113 1502 1586 F 85 83.53 1408 reject_low 82 ALIGNMENT 923 YS2-1n09.q1k chr16 38 1137 944659 945769 F 1100 95.18 1357 ambiguous_tel 3 ALIGNMENT 61 YS2-1n09.p1k chr14 29 113 1806 1890 F 85 91.76 1408 reject_low 29 ALIGNMENT 0 YS2-1n09.p1k chr02 92 826 1708 1707 F 735 0.00 1408 reject_low 72 ALIGNMENT 25 YS2-1n09.p1k chr12 91 29 1069876 1069938 C 63 80.95 1408 reject_low 178 ALIGNMENT 0 YS2-1n09.p1k chr10 123 826 2294 2293 F 704 0.00 1408 reject_low 81 ALIGNMENT 40 YS2-1n09.p1k chr08 113 29 560453 560537 C 85 83.53 1408 reject_low 88 ALIGNMENT 0 YS2-1n09.p1k chr09 114 826 2146 2145 F 713 0.00 1408 reject_low 109 ALIGNMENT 61 YS2-1n09.p1k chr07 113 29 1089078 1089162 C 85 91.76 1408 reject_low 24 ALIGNMENT 0 YS2-1n09.p1k chr14 114 826 1782 1781 F 713 0.00 1408 reject_low 163 ALIGNMENT 22 YS2-1n09.p1k chr12 29 113 1951 2035 F 85 76.47 1408 reject_low 193 ALIGNMENT 920 YS2-1n09.q1k chr12 38 1137 1068299 1069409 F 1100 95.09 1357 ambiguous_tel 9,10 ALIGNMENT 46 YS2-1n09.p1k chr16 113 29 945998 946082 C 85 85.88 1408 reject_low 70 ALIGNMENT 43 YS2-1n09.p1k chr10 29 113 1757 1841 F 85 84.71 1408 reject_low 75 ALIGNMENT 28 YS2-1n09.p1k chr12 29 113 1915 1999 F 85 78.82 1408 reject_low 159 ALIGNMENT 0 YS2-1n09.p1k chr09 114 826 2038 2037 F 713 0.00 1408 reject_low 171 ALIGNMENT 0 YS2-1n09.p1k chr06 114 826 1065 1064 F 713 0.00 1408 reject_low 189 ALIGNMENT 40 YS2-1n09.p1k chr15 113 29 1089553 1089637 C 85 83.53 1408 reject_low 101 ALIGNMENT 52 YS2-1n09.p1k chr06 29 113 945 1029 F 85 88.24 1408 reject_low 40 ALIGNMENT 0 YS2-1n09.p1k chr12 826 114 1076482 1076481 C 713 0.00 1408 reject_low 162 ALIGNMENT 901 YS2-1n10.p1k chr07 1057 31 542293 543330 C 1027 96.69 1361 accept_trans 0 ALIGNMENT 885 YS2-1n10.q1k chr07 41 1187 533298 534429 F 1147 94.25 1416 accept_trans 0 ALIGNMENT 459 YS2-1n11.p1k chr02 712 128 536442 537023 C 585 94.19 990 accept 0 ALIGNMENT 852 YS2-1n11.q1k chr02 26 1138 533260 534367 F 1113 93.17 1336 accept 0 ALIGNMENT 224 YS2-1n12.p1k chr02 527 215 536711 537025 C 313 92.65 968 accept 0 ALIGNMENT 0 YS2-1n12.q1k chr13 62 561 434899 434898 F 500 0.00 1344 reject_low 1 ALIGNMENT 900 YS2-1n12.q1k chr02 25 1111 533260 534349 F 1087 95.12 1344 accept 0 ALIGNMENT 90 YS2-1n12.q1k chr13 562 857 434899 435194 F 296 77.70 1344 reject_low 1 ALIGNMENT 164 YS2-1n13.p1k chr12 26 194 466228 466396 F 169 99.41 213 accept 1 ALIGNMENT 0 YS2-1n13.p1k chr12 195 213 466396 466395 F 19 0.00 213 accept 1 ALIGNMENT 0 YS2-1n13.p1k chr12 195 213 457259 457258 F 19 0.00 213 accept 0 ALIGNMENT 164 YS2-1n13.p1k chr12 26 194 457091 457259 F 169 99.41 213 accept 0 ALIGNMENT 390 YS2-1n14.p1k chr12 28 454 271463 271891 F 427 99.06 471 accept 0 ALIGNMENT 0 YS2-1n14.p1k chr12 455 471 271891 271890 F 17 0.00 471 accept 0 ALIGNMENT 826 YS2-1n15.q1k chr16 1116 30 626960 628037 C 1087 93.19 1371 accept 0 ALIGNMENT 880 YS2-1n15.p1k chr16 53 1093 623825 624878 F 1041 95.77 1108 accept 0 ALIGNMENT 688 YS2-1n16.q1k chr16 839 7 627186 628023 C 833 94.72 1259 accept 0 ALIGNMENT 916 YS2-1n16.p1k chr16 26 1069 623825 624878 F 1044 97.13 1217 accept 0 ALIGNMENT 0 YS2-1n18.p1k vc_3 738 706 1446 1478 C 33 0.00 1273 reject_vc 1 ALIGNMENT 20 YS2-1n18.p1k vc_1 868 739 1316 1445 C 130 72.31 1273 reject_vc 0 ALIGNMENT 51 YS2-1n18.p1k vc_4 306 416 6098 6208 F 111 82.88 1273 reject_low 5 ALIGNMENT 0 YS2-1n18.p1k vc_7 706 738 727 759 F 33 0.00 1273 reject_vc 3 ALIGNMENT 0 YS2-1n18.p1k vc_5 738 706 4366 4398 C 33 0.00 1273 reject_vc 2 ALIGNMENT 20 YS2-1n18.p1k vc_3 868 739 1316 1445 C 130 72.31 1273 reject_vc 1 ALIGNMENT 0 YS2-1n18.p1k vc_1 738 706 1446 1478 C 33 0.00 1273 reject_vc 0 ALIGNMENT 146 YS2-1n18.p1k vc_7 306 705 327 726 F 400 79.50 1273 reject_vc 3 ALIGNMENT 146 YS2-1n18.p1k vc_7 306 705 13789 14188 F 400 79.50 1273 reject_vc 4 ALIGNMENT 146 YS2-1n18.p1k vc_3 705 306 1479 1878 C 400 79.50 1273 reject_vc 1 ALIGNMENT 146 YS2-1n18.p1k vc_1 705 306 1479 1878 C 400 79.50 1273 reject_vc 0 ALIGNMENT 20 YS2-1n18.p1k vc_5 868 739 4236 4365 C 130 72.31 1273 reject_vc 2 ALIGNMENT 20 YS2-1n18.p1k vc_7 739 868 14222 14351 F 130 72.31 1273 reject_vc 4 ALIGNMENT 20 YS2-1n18.p1k vc_7 739 868 760 889 F 130 72.31 1273 reject_vc 3 ALIGNMENT 146 YS2-1n18.p1k vc_5 705 306 4399 4798 C 400 79.50 1273 reject_vc 2 ALIGNMENT 0 YS2-1n18.p1k vc_7 706 738 14189 14221 F 33 0.00 1273 reject_vc 4 ALIGNMENT 959 YS2-1n19.p1k chr07 26 1161 1019968 1021120 F 1136 95.95 1262 accept 0 ALIGNMENT 838 YS2-1n19.q1k chr07 1008 33 1020442 1021421 C 976 96.52 1319 accept 0 ALIGNMENT 900 YS2-1n20.q1k chr13 1161 27 681525 682648 C 1135 94.36 1321 accept 0 ALIGNMENT 0 YS2-1n24.p1k chr09 680 664 112449 112448 C 17 0.00 680 accept_chi 0 ALIGNMENT 610 YS2-1n24.p1k chr09 663 31 112448 113081 C 633 99.37 680 accept_chi 0 ALIGNMENT 491 YS2-1n24.q1k chr09 25 631 112448 113057 F 607 94.40 1281 accept_chi 1 ALIGNMENT 0 YS2-1o01.q1k vc_4 305 307 1615 1878 F 3 0.00 835 reject_low 6 ALIGNMENT 93 YS2-1o01.q1k vc_7 421 305 4585 4699 C 117 94.87 835 reject_low 7 ALIGNMENT 385 YS2-1o01.q1k vc_4 421 1 5234 5654 C 421 97.62 835 reject_low 2 ALIGNMENT 62 YS2-1o01.q1k vc_4 304 238 6273 6339 C 67 98.51 835 reject_low 9 ALIGNMENT 296 YS2-1o01.q1k vc_2 1 303 2322 2624 F 303 99.34 835 reject_low 4 ALIGNMENT 0 YS2-1o01.q1k vc_4 237 62 6340 6339 C 176 0.00 835 reject_low 9 ALIGNMENT 241 YS2-1o01.q1k vc_7 303 53 4922 5172 C 251 98.80 835|0,1 reject_low 7 ALIGNMENT 62 YS2-1o01.q1k vc_4 304 238 46 112 C 67 98.51 835 reject_low 8 ALIGNMENT 481 YS2-1o01.q1k vc_7 675 1 1900 2569 C 675 91.26 835 reject_vc 1 ALIGNMENT 0 YS2-1o01.q1k vc_7 53 54 5172 6360 C 0 0.00 835 reject_low 7 ALIGNMENT 0 YS2-1o01.q1k vc_7 304 304 4700 4921 C 1 0.00 835 reject_low 7 ALIGNMENT 0 YS2-1o01.q1k vc_4 237 62 113 112 C 176 0.00 835 reject_low 8 ALIGNMENT 296 YS2-1o01.q1k vc_3 1 303 2689 2991 F 303 99.34 835 reject_low 5 ALIGNMENT 62 YS2-1o01.q1k vc_4 238 304 1548 1614 F 67 98.51 835 reject_low 6 ALIGNMENT 182 YS2-1o01.q1k vc_4 308 705 1879 2270 F 398 83.67 835 reject_low 6 ALIGNMENT 484 YS2-1o01.q1k vc_5 1 705 2556 3254 F 705 90.50 835 reject_vc 0 ALIGNMENT 0 YS2-1o01.q1k vc_4 62 237 1548 1547 F 176 0.00 835 reject_low 6 ALIGNMENT 51 YS2-1o01.q1k vc_7 54 3 6360 6411 C 52 100.00 835|1,0 reject_low 7 ALIGNMENT 296 YS2-1o01.q1k vc_1 1 303 2689 2991 F 303 99.34 835 reject_low 3 ALIGNMENT 0 YS2-1o02.p1k chr07 62 744 319784 319783 F 683 0.00 1185 reject_low 5 ALIGNMENT 0 YS2-1o02.p1k chr07 743 62 110702 110701 C 682 0.00 1185 reject_low 6 ALIGNMENT 825 YS2-1o02.q1k chr13 1060 29 363666 364692 C 1032 94.77 1400 accept_trans 0 ALIGNMENT 0 YS2-1o02.p1k chr11 740 62 313122 313121 C 679 0.00 1185 reject_low 1 ALIGNMENT 0 YS2-1o02.p1k chr05 62 738 207350 207349 F 677 0.00 1185 reject_low 2 ALIGNMENT 445 YS2-1o02.p1k chr13 599 1159 362917 363477 F 561 94.65 1185|4,0 accept_trans 0 ALIGNMENT 76 YS2-1o02.p1k chr05 739 827 207350 207439 F 89 96.63 1185 reject_low 2 ALIGNMENT 553 YS2-1o02.p1k chr13 35 605 356434 357004 F 571 100.00 1185|0,3 accept_trans 0 ALIGNMENT 76 YS2-1o02.p1k chr08 744 827 62752 62835 F 84 97.62 1185 reject_low 4 ALIGNMENT 73 YS2-1o02.p1k chr07 824 744 110621 110701 C 81 97.53 1185 reject_low 6 ALIGNMENT 0 YS2-1o02.p1k chr13 603 602 357002 362920 F 0 0.00 1185 accept_trans 0 ALIGNMENT 81 YS2-1o02.p1k chr05 827 745 434526 434608 C 83 100.00 1185 reject_low 3 ALIGNMENT 0 YS2-1o02.p1k chr08 62 743 62752 62751 F 682 0.00 1185 reject_low 4 ALIGNMENT 82 YS2-1o02.p1k chr11 828 741 313034 313121 C 88 98.86 1185 reject_low 1 ALIGNMENT 75 YS2-1o02.p1k chr07 745 820 319784 319859 F 76 100.00 1185 reject_low 5 ALIGNMENT 0 YS2-1o02.p1k chr05 744 62 434609 434608 C 683 0.00 1185 reject_low 3 ALIGNMENT 125 YS2-1o03.q1k vc_4 311 628 1882 2189 F 318 82.70 869 reject_vc 8 ALIGNMENT 0 YS2-1o03.q1k vc_4 305 310 1615 1881 F 6 0.00 869 reject_vc 8 ALIGNMENT 0 YS2-1o03.q1k vc_7 53 54 5172 6360 C 0 0.00 869 reject_vc 7 ALIGNMENT 298 YS2-1o03.q1k vc_1 1 303 2689 2991 F 303 99.67 869 reject_vc 4 ALIGNMENT 298 YS2-1o03.q1k vc_2 1 303 2322 2624 F 303 99.67 869 reject_vc 5 ALIGNMENT 51 YS2-1o03.q1k vc_7 54 3 6360 6411 C 52 100.00 869|1,0 reject_vc 7 ALIGNMENT 62 YS2-1o03.q1k vc_4 304 238 6273 6339 C 67 98.51 869 reject_low 10 ALIGNMENT 431 YS2-1o03.q1k vc_5 1 628 2556 3173 F 628 90.92 869 reject_vc 1 ALIGNMENT 0 YS2-1o03.q1k vc_4 62 237 1548 1547 F 176 0.00 869 reject_vc 8 ALIGNMENT 298 YS2-1o03.q1k vc_3 1 303 2689 2991 F 303 99.67 869 reject_vc 6 ALIGNMENT 244 YS2-1o03.q1k vc_7 303 53 4922 5172 C 251 99.20 869|0,1 reject_vc 7 ALIGNMENT 62 YS2-1o03.q1k vc_4 238 304 1548 1614 F 67 98.51 869 reject_vc 8 ALIGNMENT 0 YS2-1o03.p1k chr10 281 263 126240 126239 C 19 0.00 281 accept 0 ALIGNMENT 431 YS2-1o03.q1k vc_7 628 1 1952 2569 C 628 90.92 869 reject_vc 2 ALIGNMENT 0 YS2-1o03.q1k vc_4 237 62 113 112 C 176 0.00 869 reject_low 9 ALIGNMENT 212 YS2-1o03.p1k chr10 262 37 126239 126464 C 226 100.00 281 accept 0 ALIGNMENT 62 YS2-1o03.q1k vc_4 304 238 46 112 C 67 98.51 869 reject_low 9 ALIGNMENT 0 YS2-1o03.q1k vc_7 304 304 4700 4921 C 1 0.00 869 reject_vc 7 ALIGNMENT 80 YS2-1o03.q1k vc_7 423 305 4583 4699 C 119 90.76 869 reject_vc 7 ALIGNMENT 0 YS2-1o03.q1k vc_4 237 62 6340 6339 C 176 0.00 869 reject_low 10 ALIGNMENT 375 YS2-1o03.q1k vc_4 423 1 5232 5654 C 423 96.69 869 reject_vc 3 ALIGNMENT 94 YS2-1o04.p1k chr06 724 617 31622 31729 C 108 98.15 866 reject_low 3 ALIGNMENT 762 YS2-1o04.p1k chr12 33 865 458723 459556 F 833 99.16 866 accept 0 ALIGNMENT 0 YS2-1o04.p1k chr06 616 62 31730 31729 C 555 0.00 866 reject_low 3 ALIGNMENT 722 YS2-1o04.q1k chr12 866 31 458721 459556 C 836 97.37 1319 reject_low 2 ALIGNMENT 762 YS2-1o04.p1k chr12 33 865 467860 468693 F 833 99.16 866 reject_low 1 ALIGNMENT 0 YS2-1o04.p1k chr06 866 725 31623 31622 C 142 0.00 866 reject_low 3 ALIGNMENT 0 YS2-1o04.q1k chr06 280 572 31729 31728 F 293 0.00 1319 reject_low 4 ALIGNMENT 0 YS2-1o04.q1k chr06 77 171 31622 31621 F 95 0.00 1319 reject_low 4 ALIGNMENT 722 YS2-1o04.q1k chr12 866 31 467858 468693 C 836 97.37 1319 accept 0 ALIGNMENT 91 YS2-1o04.q1k chr06 172 279 31622 31729 F 108 97.22 1319 reject_low 4 ALIGNMENT 740 YS2-1o05.q1k chr13 33 1010 89274 90243 F 978 93.46 1277 accept 0 ALIGNMENT 897 YS2-1o05.p1k chr13 1095 31 93353 94437 C 1065 96.53 1184 accept 0 ALIGNMENT 830 YS2-1o07.q1k chr02 32 1110 470461 471527 F 1079 93.79 1417 accept 0 ALIGNMENT 966 YS2-1o07.p1k chr02 1136 33 474272 475393 C 1104 96.47 1274 accept 0 ALIGNMENT 842 YS2-1o08.p1k chr16 1004 37 603212 604193 C 968 97.31 1228 accept 0 ALIGNMENT 872 YS2-1o08.q1k chr16 30 1098 598694 599768 F 1069 94.86 1370 accept 0 ALIGNMENT 1003 YS2-1o09.p1k chr12 29 1230 913068 914268 F 1202 95.01 1301 accept 0 ALIGNMENT 911 YS2-1o09.q1k chr12 1145 30 913847 914961 C 1116 94.98 1334 accept 0 ALIGNMENT 0 YS2-1o10.q1k chr07 319 62 1002248 1002247 C 258 0.00 1470 reject_low 1 ALIGNMENT 428 YS2-1o10.q1k chr07 912 320 1001666 1002247 C 593 92.07 1470 reject_low 1 ALIGNMENT 845 YS2-1o10.p1k chr08 30 1015 448525 449520 F 986 96.65 1233 accept 0 ALIGNMENT 783 YS2-1o10.q1k chr08 912 27 452061 452934 C 886 97.52 1470 accept 0 ALIGNMENT 0 YS2-1o11.q1k chr12 210 260 412708 412707 F 51 0.00 1338 reject_low 3 ALIGNMENT 0 YS2-1o11.p1k chrm 276 62 19515 19514 C 215 0.00 1223 reject_low 1 ALIGNMENT 27 YS2-1o11.p1k chrm 802 847 75861 75906 F 46 89.13 1223 reject_low 2 ALIGNMENT 0 YS2-1o11.q1k chrm 62 649 11039 11038 F 588 0.00 1338 reject_low 1 ALIGNMENT 0 YS2-1o11.p1k chrm 62 801 75861 75860 F 740 0.00 1223 reject_low 2 ALIGNMENT 20 YS2-1o11.q1k chrm 654 690 29838 29874 F 37 86.49 1338 reject_bad_break 0 ALIGNMENT 0 YS2-1o11.p1k chrm 848 908 75906 75905 F 61 0.00 1223 reject_low 2 ALIGNMENT 0 YS2-1o11.p1k chrm 908 706 19082 19081 C 203 0.00 1223 reject_low 1 ALIGNMENT 20 YS2-1o11.p1k chrm 705 676 19081 19110 C 30 93.33 1223 reject_low 1 ALIGNMENT 21 YS2-1o11.q1k chrm 650 690 11039 11080 F 41 85.37 1338 reject_low 1 ALIGNMENT 0 YS2-1o11.q1k chr12 62 119 412620 412619 F 58 0.00 1338 reject_low 3 ALIGNMENT 20 YS2-1o11.p1k chrm 314 277 19477 19514 C 38 86.84 1223 reject_low 1 ALIGNMENT 0 YS2-1o11.p1k chrm 675 315 19111 19476 C 361 0.00 1223 reject_low 1 ALIGNMENT 172 YS2-1o11.q1k chrm 44 324 29007 29285 F 281 91.46 1338 reject_bad_break 0 ALIGNMENT 53 YS2-1o11.q1k chr12 120 209 412620 412708 F 90 92.22 1338 reject_low 3 ALIGNMENT 0 YS2-1o11.q1k chrm 325 653 29286 29837 F 329 0.00 1338 reject_bad_break 0 ALIGNMENT 20 YS2-1o12.q1k chr12 918 842 459707 459780 C 77 77.92 1300 reject_bad_break 0 ALIGNMENT 0 YS2-1o12.p1k chr12 597 839 472582 472581 F 243 0.00 1242 reject_low 5 ALIGNMENT 94 YS2-1o12.p1k chr06 218 111 31622 31729 C 108 98.15 1242 reject_low 4 ALIGNMENT 0 YS2-1o12.p1k chr12 62 477 489348 489347 F 416 0.00 1242 reject_low 3 ALIGNMENT 119 YS2-1o12.p1k chr12 478 596 485696 485814 F 119 100.00 1242 reject_low 7 ALIGNMENT 0 YS2-1o12.p1k chr12 597 839 482162 482161 F 243 0.00 1242 reject_low 6 ALIGNMENT 0 YS2-1o12.q1k chr12 501 99 451420 451419 C 403 0.00 1300 reject_low 2 ALIGNMENT 119 YS2-1o12.p1k chr12 478 596 472464 472582 F 119 100.00 1242 reject_low 5 ALIGNMENT 548 YS2-1o12.p1k chr12 26 596 468360 468930 F 571 99.65 1242 reject_low 1 ALIGNMENT 0 YS2-1o12.q1k chr12 841 792 459781 459837 C 50 0.00 1300 reject_bad_break 0 ALIGNMENT 91 YS2-1o12.q1k chr12 98 1 451419 451517 C 98 97.96 1300 reject_low 2 ALIGNMENT 904 YS2-1o12.p1k chr12 26 1171 459223 460395 F 1146 94.94 1242 reject_bad_break 0 ALIGNMENT 0 YS2-1o12.p1k chr12 62 477 482044 482043 F 416 0.00 1242 reject_low 6 ALIGNMENT 522 YS2-1o12.q1k chr12 791 1 459838 460654 C 791 90.90 1300 reject_bad_break 0 ALIGNMENT 119 YS2-1o12.p1k chr12 478 596 482044 482162 F 119 100.00 1242 reject_low 6 ALIGNMENT 0 YS2-1o12.p1k chr12 612 839 489481 489480 F 228 0.00 1242 reject_low 3 ALIGNMENT 0 YS2-1o12.p1k chr06 110 62 31730 31729 C 49 0.00 1242 reject_low 4 ALIGNMENT 128 YS2-1o12.p1k chr12 478 611 489348 489481 F 134 98.51 1242 reject_low 3 ALIGNMENT 0 YS2-1o12.p1k chr12 62 477 485696 485695 F 416 0.00 1242 reject_low 7 ALIGNMENT 0 YS2-1o12.p1k chr12 62 477 472464 472463 F 416 0.00 1242 reject_low 5 ALIGNMENT 0 YS2-1o12.p1k chr12 597 839 485814 485813 F 243 0.00 1242 reject_low 7 ALIGNMENT 0 YS2-1o12.p1k chr06 839 219 31623 31622 C 621 0.00 1242 reject_low 4 ALIGNMENT 0 YS2-1o12.p1k chr12 597 839 468930 468929 F 243 0.00 1242 reject_low 1 ALIGNMENT 220 YS2-1o13.p1k chr12 33 254 454497 454718 F 222 100.00 255 accept 0 ALIGNMENT 220 YS2-1o13.p1k chr12 33 254 463634 463855 F 222 100.00 255 accept 1 ALIGNMENT 311 YS2-1o14.q1k vc_5 1 541 2556 3078 F 541 88.35 885 reject_vc 0 ALIGNMENT 257 YS2-1o14.q1k vc_3 1 306 2689 2990 F 306 95.75 885 reject_low 10 ALIGNMENT 56 YS2-1o14.q1k vc_4 312 541 1878 2094 F 230 79.13 885 reject_low 12 ALIGNMENT 0 YS2-1o14.q1k vc_7 53 54 5172 6360 C 0 0.00 885 reject_low 11 ALIGNMENT 203 YS2-1o14.q1k vc_7 306 53 4923 5172 C 254 94.49 885|0,1 reject_low 11 ALIGNMENT 257 YS2-1o14.q1k vc_2 1 306 2322 2623 F 306 95.75 885 reject_low 9 ALIGNMENT 289 YS2-1o14.p1k vc_5 474 1 4186 4669 C 474 89.03 522 reject_vc 0 ALIGNMENT 0 YS2-1o14.q1k vc_4 62 311 1878 1877 F 250 0.00 885 reject_low 12 ALIGNMENT 286 YS2-1o14.p1k vc_7 1 474 456 939 F 474 88.61 522 reject_vc 1 ALIGNMENT 51 YS2-1o14.q1k vc_7 54 3 6360 6411 C 52 100.00 885|1,0 reject_low 11 ALIGNMENT 286 YS2-1o14.p1k vc_7 1 474 13918 14401 F 474 88.61 522 reject_low 6 ALIGNMENT 0 YS2-1o14.q1k vc_7 312 307 4697 4922 C 6 0.00 885 reject_low 11 ALIGNMENT 42 YS2-1o14.q1k vc_7 419 313 4595 4696 C 107 83.18 885 reject_low 11 ALIGNMENT 289 YS2-1o14.p1k vc_1 474 1 1266 1749 C 474 89.03 522 reject_low 2 ALIGNMENT 289 YS2-1o14.p1k vc_2 474 1 1266 1749 C 474 89.03 522 reject_low 3 ALIGNMENT 289 YS2-1o14.p1k vc_6 1 474 3712 4195 F 474 88.82 522 reject_low 5 ALIGNMENT 311 YS2-1o14.q1k vc_7 541 1 2047 2569 C 541 88.35 885 reject_vc 1 ALIGNMENT 257 YS2-1o14.q1k vc_1 1 306 2689 2990 F 306 95.75 885 reject_low 8 ALIGNMENT 289 YS2-1o14.p1k vc_3 474 1 1266 1749 C 474 89.03 522 reject_low 4 ALIGNMENT 291 YS2-1o14.q1k vc_4 419 1 5244 5654 C 419 91.65 885 reject_low 7 ALIGNMENT 237 YS2-1o15.p1k chr03 38 284 97149 97395 F 247 99.60 303 accept 0 ALIGNMENT 0 YS2-1o15.p1k chr03 285 303 97395 97394 F 19 0.00 303 accept 0 ALIGNMENT 630 YS2-1o16.q1k chr08 42 842 90151 90945 F 801 95.26 1387 ambiguous_trans 2 ALIGNMENT 642 YS2-1o16.q1k chr10 42 842 202083 202877 F 801 95.76 1387 ambiguous_trans 1 ALIGNMENT 1012 YS2-1o16.p1k chr13 35 1204 881790 882956 F 1170 96.32 1262 accept 0 ALIGNMENT 630 YS2-1o16.q1k chr16 842 42 437699 438493 C 801 95.26 1387 ambiguous_trans 3 ALIGNMENT 774 YS2-1o17.q1k chr04 915 2 1248959 1249875 C 914 96.06 1219 accept 0 ALIGNMENT 778 YS2-1o18.q1k chr05 945 4 296472 297399 C 942 95.75 1324 accept 0 ALIGNMENT 194 YS2-1o19.p1k chr04 35 233 1470510 1470708 F 199 100.00 251 accept 0 ALIGNMENT 0 YS2-1o19.p1k chr04 234 251 1470708 1470707 F 18 0.00 251 accept 0 ALIGNMENT 0 YS2-1o21.q1k chrm 348 492 357 621 F 145 0.00 1309 reject_low 1 ALIGNMENT 0 YS2-1o21.q1k chrm 465 122 44202 52755 C 344 0.00 1309 reject_low 4 ALIGNMENT 265 YS2-1o21.q1k chrm 2 480 23 489 F 479 95.41 1309 accept 0 ALIGNMENT 32 YS2-1o21.q1k chrm 105 64 66827 66868 C 42 95.24 1309 reject_low 7 ALIGNMENT 0 YS2-1o21.q1k chrm 481 549 489 488 F 69 0.00 1309 accept 0 ALIGNMENT 0 YS2-1o21.q1k chrm 549 106 66828 66827 C 444 0.00 1309 reject_low 7 ALIGNMENT 0 YS2-1o21.q1k chrm 549 120 83041 83040 C 430 0.00 1309 reject_low 3 ALIGNMENT 104 YS2-1o21.q1k chrm 493 746 622 869 F 254 87.40 1309 reject_low 1 ALIGNMENT 0 YS2-1o21.q1k chrm 127 549 52396 52395 F 423 0.00 1309 reject_low 5 ALIGNMENT 270 YS2-1o21.p1k chrm 672 38 622 1284 C 635 89.29 1090 accept 0 ALIGNMENT 38 YS2-1o21.q1k chrm 142 10 34251 34387 C 133 82.71 1309 reject_low 2 ALIGNMENT 177 YS2-1o21.q1k chrm 33 347 54 356 F 315 94.92 1309 reject_low 1 ALIGNMENT 76 YS2-1o21.p1k chrm 950 685 229 489 C 266 82.71 1090 accept 0 ALIGNMENT 0 YS2-1o21.p1k chrm 684 673 490 621 C 12 0.00 1090 accept 0 ALIGNMENT 0 YS2-1o21.q1k chrm 549 143 72978 72977 C 407 0.00 1309 reject_low 6 ALIGNMENT 42 YS2-1o21.q1k chrm 58 126 52326 52396 F 69 88.41 1309 reject_low 5 ALIGNMENT 35 YS2-1o21.q1k chrm 142 56 72977 73058 C 87 86.21 1309 reject_low 6 ALIGNMENT 35 YS2-1o21.q1k chrm 121 35 52756 52840 C 87 82.76 1309 reject_low 4 ALIGNMENT 35 YS2-1o21.q1k chrm 509 466 44158 44201 C 44 97.73 1309 reject_low 4 ALIGNMENT 0 YS2-1o21.q1k chrm 549 143 34252 34251 C 407 0.00 1309 reject_low 2 ALIGNMENT 56 YS2-1o21.q1k chrm 119 47 83040 83113 C 73 93.15 1309 reject_low 3 ALIGNMENT 0 YS2-1o21.q1k chrm 549 510 44159 44158 C 40 0.00 1309 reject_low 4 ALIGNMENT 770 YS2-1o22.q1k chr12 2 896 454006 454891 F 895 96.65 1301 accept 0 ALIGNMENT 770 YS2-1o22.q1k chr12 2 896 463143 464028 F 895 96.65 1301 accept 1 ALIGNMENT 1040 YS2-1p01.p1k chr12 33 1194 461017 462177 F 1162 96.73 1194 accept 1 ALIGNMENT 823 YS2-1p01.q1k chr12 1045 40 454366 455361 C 1006 95.13 1387 accept 0 ALIGNMENT 1040 YS2-1p01.p1k chr12 33 1194 451880 453040 F 1162 96.73 1194 accept 0 ALIGNMENT 672 YS2-1p01.p1k chr12 33 728 489848 490543 F 696 98.99 1194 reject_low 2 ALIGNMENT 823 YS2-1p01.q1k chr12 1045 40 463503 464498 C 1006 95.13 1387 accept 1 ALIGNMENT 0 YS2-1p01.p1k chr12 729 855 490543 490542 F 127 0.00 1194 reject_low 2 ALIGNMENT 792 YS2-1p02.q1k chr15 1002 4 326459 327465 C 999 94.89 1307 accept 0 ALIGNMENT 974 YS2-1p02.p1k chr15 34 1127 321074 322179 F 1094 97.26 1132 accept 0 ALIGNMENT 0 YS2-1p03.q1k vc_4 626 62 5813 5812 C 565 0.00 1291 reject_low 4 ALIGNMENT 0 YS2-1p03.q1k vc_5 699 628 5026 5025 C 72 0.00 1291 reject_low 14 ALIGNMENT 36 YS2-1p03.q1k vc_5 624 589 1 36 C 36 100.00 1291 reject_low 17 ALIGNMENT 0 YS2-1p03.q1k vc_4 626 62 1535 1534 C 565 0.00 1291 reject_low 9 ALIGNMENT 264 YS2-1p03.q1k vc_3 627 1056 2531 2958 F 430 88.14 1291 reject_low 7 ALIGNMENT 0 YS2-1p03.q1k vc_7 626 62 2728 2727 C 565 0.00 1291 reject_low 2 ALIGNMENT 0 YS2-1p03.q1k vc_4 628 627 5872 6353 F 0 0.00 1291 reject_low 8 ALIGNMENT 0 YS2-1p03.q1k vc_2 587 62 2145 2144 C 526 0.00 1291 reject_low 12 ALIGNMENT 20 YS2-1p03.q1k vc_4 1105 1154 1888 1935 F 50 84.00 1291 reject_low 10 ALIGNMENT 41 YS2-1p03.q1k vc_7 839 787 6360 6411 C 53 94.34 1291|1,0 reject_low 18 ALIGNMENT 38 YS2-1p03.q1k vc_7 590 627 13525 13562 F 38 100.00 1291 reject_low 16 ALIGNMENT 154 YS2-1p03.q1k vc_4 627 788 126 287 F 162 98.77 1291 reject_low 10 ALIGNMENT 0 YS2-1p03.q1k vc_4 62 587 5832 5831 F 526 0.00 1291 reject_low 8 ALIGNMENT 40 YS2-1p03.q1k vc_4 588 627 5832 5871 F 40 100.00 1291 reject_low 8 ALIGNMENT 40 YS2-1p03.q1k vc_1 627 588 2472 2511 C 40 100.00 1291 reject_low 11 ALIGNMENT 0 YS2-1p03.q1k vc_1 587 62 2512 2511 C 526 0.00 1291 reject_low 11 ALIGNMENT 0 YS2-1p03.q1k vc_7 786 62 6412 6411 C 725 0.00 1291 reject_low 18 ALIGNMENT 0 YS2-1p03.q1k vc_5 588 62 37 36 C 527 0.00 1291 reject_low 17 ALIGNMENT 536 YS2-1p03.q1k chr09 587 30 366929 367486 C 558 99.82 1291 accept_chi 0 ALIGNMENT 0 YS2-1p03.q1k chr09 699 588 366930 366929 C 112 0.00 1291 accept_chi 0 ALIGNMENT 0 YS2-1p03.q1k vc_4 789 1104 288 1887 F 316 0.00 1291 reject_low 10 ALIGNMENT 0 YS2-1p03.q1k vc_5 699 625 2 1 C 75 0.00 1291 reject_low 17 ALIGNMENT 0 YS2-1p03.q1k vc_3 587 62 2512 2511 C 526 0.00 1291 reject_low 13 ALIGNMENT 534 YS2-1p03.p1k chr09 30 585 366930 367486 F 556 99.82 603 accept_chi 1 ALIGNMENT 0 YS2-1p03.q1k vc_7 628 699 13562 13561 F 72 0.00 1291 reject_low 16 ALIGNMENT 154 YS2-1p03.q1k vc_4 627 788 6353 6514 F 162 98.77 1291|1,0 reject_low 8 ALIGNMENT 268 YS2-1p03.q1k vc_4 1154 627 5289 5812 C 528 85.23 1291 reject_low 4 ALIGNMENT 0 YS2-1p03.q1k vc_1 699 628 2473 2472 C 72 0.00 1291 reject_low 11 ALIGNMENT 40 YS2-1p03.q1k vc_2 627 588 2105 2144 C 40 100.00 1291 reject_low 12 ALIGNMENT 40 YS2-1p03.q1k vc_3 627 588 2472 2511 C 40 100.00 1291 reject_low 13 ALIGNMENT 0 YS2-1p03.q1k vc_7 62 589 63 62 F 528 0.00 1291 reject_low 15 ALIGNMENT 0 YS2-1p03.q1k vc_2 62 626 2164 2163 F 565 0.00 1291 reject_low 6 ALIGNMENT 0 YS2-1p03.q1k vc_1 62 626 2531 2530 F 565 0.00 1291 reject_low 5 ALIGNMENT 0 YS2-1p03.q1k vc_5 588 62 5064 5063 C 527 0.00 1291 reject_low 14 ALIGNMENT 0 YS2-1p03.q1k vc_3 62 626 2531 2530 F 565 0.00 1291 reject_low 7 ALIGNMENT 0 YS2-1p03.q1k vc_4 62 626 126 125 F 565 0.00 1291 reject_low 10 ALIGNMENT 0 YS2-1p03.q1k vc_7 838 839 5172 6360 C 0 0.00 1291 reject_low 18 ALIGNMENT 274 YS2-1p03.q1k vc_5 627 1154 2398 2919 F 528 85.23 1291 reject_low 3 ALIGNMENT 85 YS2-1p03.q1k vc_4 715 627 1446 1534 C 89 98.88 1291 reject_low 9 ALIGNMENT 264 YS2-1p03.q1k vc_1 627 1056 2531 2958 F 430 88.14 1291 reject_low 5 ALIGNMENT 0 YS2-1p03.p1k chr09 586 603 367486 367485 F 18 0.00 603 accept_chi 1 ALIGNMENT 38 YS2-1p03.q1k vc_7 590 627 63 100 F 38 100.00 1291 reject_low 15 ALIGNMENT 0 YS2-1p03.q1k vc_7 62 589 13525 13524 F 528 0.00 1291 reject_low 16 ALIGNMENT 0 YS2-1p03.q1k vc_3 699 628 2473 2472 C 72 0.00 1291 reject_low 13 ALIGNMENT 0 YS2-1p03.q1k vc_7 1104 1057 4688 4954 C 48 0.00 1291 reject_low 18 ALIGNMENT 0 YS2-1p03.q1k vc_7 628 699 100 99 F 72 0.00 1291 reject_low 15 ALIGNMENT 0 YS2-1p03.q1k vc_2 699 628 2106 2105 C 72 0.00 1291 reject_low 12 ALIGNMENT 39 YS2-1p03.q1k vc_5 627 589 5025 5063 C 39 100.00 1291 reject_low 14 ALIGNMENT 0 YS2-1p03.q1k vc_5 62 626 2398 2397 F 565 0.00 1291 reject_low 3 ALIGNMENT 264 YS2-1p03.q1k vc_2 627 1056 2164 2591 F 430 88.14 1291 reject_low 6 ALIGNMENT 275 YS2-1p03.q1k vc_7 1154 627 2206 2727 C 528 85.61 1291 reject_low 2 ALIGNMENT 20 YS2-1p03.q1k vc_7 1154 1105 4640 4687 C 50 84.00 1291 reject_low 18 ALIGNMENT 71 YS2-1p03.q1k vc_7 1056 838 4955 5172 C 219 79.00 1291|0,1 reject_low 18 ALIGNMENT 378 YS2-1p04.p1k chr08 233 673 202737 203170 F 441 96.60 1233 accept 0 ALIGNMENT 860 YS2-1p04.q1k chr08 1057 33 207294 208319 C 1025 95.61 1298 accept 0 ALIGNMENT 0 YS2-1p04.q1k chr08 1236 1058 207128 207293 C 179 0.00 1298 accept 0 ALIGNMENT 21 YS2-1p04.q1k chr08 1290 1237 207074 207127 C 54 81.48 1298 accept 0 ALIGNMENT 454 YS2-1p05.p1k vc_7 1 647 456 1092 F 647 91.65 653 reject_vc 5 ALIGNMENT 463 YS2-1p05.p1k vc_6 1 647 3712 4348 F 647 92.12 653 reject_vc 1 ALIGNMENT 460 YS2-1p05.p1k vc_1 647 1 1113 1749 C 647 91.96 653 reject_vc 2 ALIGNMENT 454 YS2-1p05.p1k vc_7 1 647 13918 14554 F 647 91.65 653 reject_vc 6 ALIGNMENT 463 YS2-1p05.p1k vc_5 647 1 4033 4669 C 647 92.12 653 reject_vc 0 ALIGNMENT 460 YS2-1p05.p1k vc_2 647 1 1113 1749 C 647 91.96 653 reject_vc 3 ALIGNMENT 460 YS2-1p05.p1k vc_3 647 1 1113 1749 C 647 91.96 653 reject_vc 4 ALIGNMENT 814 YS2-1p06.q1k chr09 1086 32 80266 81309 C 1055 94.12 1378 accept 0 ALIGNMENT 820 YS2-1p06.p1k chr09 33 1038 78827 79848 F 1006 95.13 1210 accept 0 ALIGNMENT 800 YS2-1p07.q1k chr03 28 1017 276768 277760 F 990 95.15 1406 accept 0 ALIGNMENT 918 YS2-1p07.p1k chr03 1185 37 277929 279090 C 1149 95.13 1272 accept 0 ALIGNMENT 841 YS2-1p09.p1k chr05 1061 34 241112 242159 C 1028 95.43 1213 accept 0 ALIGNMENT 845 YS2-1p09.q1k chr05 31 1032 236904 237890 F 1002 96.51 1404 accept 0 ALIGNMENT 880 YS2-1p11.p1k chr16 1152 75 793593 794657 C 1078 95.45 1155 accept 0 ALIGNMENT 784 YS2-1p11.q1k chr16 31 917 789192 790069 F 887 97.41 1510 accept 0 ALIGNMENT 902 YS2-1p12.q1k chr02 1146 31 496820 497924 C 1116 95.07 1389 accept 0 ALIGNMENT 845 YS2-1p12.p1k chr02 35 1078 495751 496807 F 1044 95.59 1102 accept 0 ALIGNMENT 125 YS2-1p13.q1k chr12 128 293 458677 458851 F 166 94.58 334 reject_bad_break 0 ALIGNMENT 75 YS2-1p13.q1k chr12 25 102 467756 467833 F 78 98.72 334 reject_low 3 ALIGNMENT 0 YS2-1p13.q1k vc_1 293 62 2513 2512 C 232 0.00 334 reject_low 4 ALIGNMENT 75 YS2-1p13.q1k chr12 25 102 458619 458696 F 78 98.72 334 reject_bad_break 0 reject_low 2 ALIGNMENT 0 YS2-1p13.q1k chr12 294 334 467988 467987 F 41 0.00 334 reject_low 2 ALIGNMENT 75 YS2-1p13.p1k chr12 302 225 458619 458696 C 78 98.72 321 reject_low 1 ALIGNMENT 36 YS2-1p13.q1k vc_5 331 296 1 36 C 36 100.00 334 reject_low 9 ALIGNMENT 39 YS2-1p13.q1k vc_5 334 296 5025 5063 C 39 100.00 334 reject_low 7 ALIGNMENT 0 YS2-1p13.p1k chr12 224 200 467834 467813 C 25 0.00 321 reject_bad_break 0 ALIGNMENT 0 YS2-1p13.q1k vc_5 295 62 5064 5063 C 234 0.00 334 reject_low 7 ALIGNMENT 75 YS2-1p13.p1k chr12 302 225 467756 467833 C 78 98.72 321 reject_bad_break 0 ALIGNMENT 0 YS2-1p13.q1k chr12 103 334 467833 467832 F 232 0.00 334 reject_low 3 ALIGNMENT 0 YS2-1p13.q1k vc_7 62 296 13525 13524 F 235 0.00 334 reject_low 8 ALIGNMENT 125 YS2-1p13.q1k chr12 128 293 467814 467988 F 166 94.58 334 reject_low 2 ALIGNMENT 0 YS2-1p13.q1k chr12 294 334 458851 458850 F 41 0.00 334 reject_bad_break 0 ALIGNMENT 125 YS2-1p13.p1k chr12 199 34 467814 467988 C 166 94.58 321 reject_bad_break 0 ALIGNMENT 0 YS2-1p13.p1k chr12 321 303 467757 467756 C 19 0.00 321 reject_bad_break 0 ALIGNMENT 41 YS2-1p13.q1k vc_4 294 334 5831 5871 F 41 100.00 334 reject_low 6 ALIGNMENT 0 YS2-1p13.q1k vc_4 62 293 5831 5830 F 232 0.00 334 reject_low 6 ALIGNMENT 0 YS2-1p13.p1k chr12 224 200 458697 458676 C 25 0.00 321 reject_low 1 ALIGNMENT 0 YS2-1p13.q1k chr12 103 127 458697 467813 F 25 0.00 334 reject_low 2 ALIGNMENT 0 YS2-1p13.q1k vc_5 295 62 37 36 C 234 0.00 334 reject_low 9 ALIGNMENT 0 YS2-1p13.q1k vc_3 293 62 2513 2512 C 232 0.00 334 reject_low 5 ALIGNMENT 0 YS2-1p13.q1k chr12 103 127 458697 458676 F 25 0.00 334 reject_bad_break 0 ALIGNMENT 125 YS2-1p13.p1k chr12 199 34 458677 458851 C 166 94.58 321 reject_low 1 ALIGNMENT 41 YS2-1p13.q1k vc_1 334 294 2472 2512 C 41 100.00 334 reject_low 4 ALIGNMENT 41 YS2-1p13.q1k vc_3 334 294 2472 2512 C 41 100.00 334 reject_low 5 ALIGNMENT 0 YS2-1p13.p1k chr12 321 303 458620 458619 C 19 0.00 321 reject_low 1 ALIGNMENT 38 YS2-1p13.q1k vc_7 297 334 13525 13562 F 38 100.00 334 reject_low 8 ALIGNMENT 843 YS2-1p14.q1k chr09 33 1105 124867 125933 F 1073 94.50 1344 accept 0 ALIGNMENT 187 YS2-1p15.q1k chr09 238 467 7015 7244 F 230 100.00 578 reject_low 1 ALIGNMENT 0 YS2-1p15.q1k chr09 62 237 7015 7014 F 176 0.00 578 reject_low 1 ALIGNMENT 0 YS2-1p15.q1k chr10 62 237 6998 6997 F 176 0.00 578 reject_low 2 ALIGNMENT 474 YS2-1p15.q1k chrm 578 5 40977 41550 C 574 99.83 578 accept 0 ALIGNMENT 187 YS2-1p15.q1k chr10 238 467 6998 7227 F 230 100.00 578 reject_low 2 ALIGNMENT 0 YS2-1p15.q1k chr10 468 578 7227 7226 F 111 0.00 578 reject_low 2 ALIGNMENT 0 YS2-1p15.q1k chr09 468 578 7244 7243 F 111 0.00 578 reject_low 1 ALIGNMENT 70 YS2-1p16.p1k chr07 295 372 93711 93788 F 78 97.44 1268 reject_low 1 ALIGNMENT 862 YS2-1p16.q1k chr04 26 1034 731662 732670 F 1009 96.63 1312 accept 0 ALIGNMENT 0 YS2-1p16.p1k chr07 373 840 93788 93787 F 468 0.00 1268 reject_low 1 ALIGNMENT 932 YS2-1p16.p1k chr04 1109 36 732498 733588 C 1074 97.02 1268 accept 0 ALIGNMENT 0 YS2-1p16.p1k chr07 62 294 93711 93710 F 233 0.00 1268 reject_low 1 ALIGNMENT 847 YS2-1p17.q1k chr16 32 1046 920663 921666 F 1015 95.67 1383 accept 0 ALIGNMENT 772 YS2-1p18.q1k chr16 33 939 920663 921554 F 907 96.58 1473 accept 0 ALIGNMENT 973 YS2-1p18.p1k chr16 1113 45 924258 925325 C 1069 98.22 1136 accept 0 ALIGNMENT 821 YS2-1p19.q1k chr12 32 1215 336443 337612 F 1184 91.81 1315 accept 0 ALIGNMENT 743 YS2-1p21.q1k chr12 881 1 456977 457844 C 881 96.37 1245 accept 0 ALIGNMENT 743 YS2-1p21.q1k chr12 881 1 466114 466981 C 881 96.37 1245 accept 1 ALIGNMENT 975 YS2-20a01.q1k chr02 1103 31 572209 573280 C 1073 98.04 1105 accept 0 ALIGNMENT 870 YS2-20a01.p1k chr02 23 1097 567291 568350 F 1075 95.91 1317 accept 0 ALIGNMENT 38 YS2-20a02.q1k vc_7 522 559 13525 13562 F 38 100.00 559 reject_low 7 ALIGNMENT 0 YS2-20a02.q1k vc_4 62 518 5831 5830 F 457 0.00 559 reject_low 5 ALIGNMENT 0 YS2-20a02.q1k vc_5 520 62 37 36 C 459 0.00 559 reject_low 8 ALIGNMENT 447 YS2-20a02.q1k chr16 42 518 540475 540951 F 477 100.00 559 accept_chi 0 ALIGNMENT 0 YS2-20a02.q1k vc_7 62 521 13525 13524 F 460 0.00 559 reject_low 7 ALIGNMENT 41 YS2-20a02.q1k vc_4 519 559 5831 5871 F 41 100.00 559 reject_low 5 ALIGNMENT 268 YS2-20a02.p1k chr16 512 36 540475 540949 C 477 86.37 1365 accept_chi 1 ALIGNMENT 0 YS2-20a02.q1k vc_3 518 62 2513 2512 C 457 0.00 559 reject_low 4 ALIGNMENT 0 YS2-20a02.q1k vc_1 518 62 2513 2512 C 457 0.00 559 reject_low 2 ALIGNMENT 41 YS2-20a02.q1k vc_3 559 519 2472 2512 C 41 100.00 559 reject_low 4 ALIGNMENT 39 YS2-20a02.q1k vc_5 559 521 5025 5063 C 39 100.00 559 reject_low 6 ALIGNMENT 36 YS2-20a02.q1k vc_5 556 521 1 36 C 36 100.00 559 reject_low 8 ALIGNMENT 0 YS2-20a02.q1k vc_5 520 62 5064 5063 C 459 0.00 559 reject_low 6 ALIGNMENT 0 YS2-20a02.q1k vc_2 518 62 2146 2145 C 457 0.00 559 reject_low 3 ALIGNMENT 0 YS2-20a02.q1k chr16 519 559 540951 540950 F 41 0.00 559 accept_chi 0 ALIGNMENT 41 YS2-20a02.q1k vc_2 559 519 2105 2145 C 41 100.00 559 reject_low 3 ALIGNMENT 41 YS2-20a02.q1k vc_1 559 519 2472 2512 C 41 100.00 559 reject_low 2 ALIGNMENT 0 YS2-20a03.p1k chr05 239 576 81239 81238 F 338 0.00 576 reject_low 11 ALIGNMENT 0 YS2-20a03.q1k chr04 359 62 390510 390509 C 298 0.00 609 reject_low 2 ALIGNMENT 28 YS2-20a03.p1k chr16 190 243 650495 650548 F 54 96.30 576 reject_low 5 ALIGNMENT 27 YS2-20a03.p1k chr04 174 237 390446 390509 F 64 89.06 576 reject_low 3 ALIGNMENT 0 YS2-20a03.p1k chr04 62 173 390446 390445 F 112 0.00 576 reject_low 3 ALIGNMENT 0 YS2-20a03.p1k chr05 576 246 142943 142942 C 331 0.00 576 reject_low 8 ALIGNMENT 23 YS2-20a03.p1k chr12 190 237 701210 701257 F 48 95.83 576 reject_low 10 ALIGNMENT 0 YS2-20a03.q1k chr16 353 62 650549 650548 C 292 0.00 609 reject_low 4 ALIGNMENT 0 YS2-20a03.p1k chr04 238 576 390509 390508 F 339 0.00 576 reject_low 3 ALIGNMENT 23 YS2-20a03.q1k chr05 352 399 142942 142989 F 48 97.92 609 reject_low 6 ALIGNMENT 0 YS2-20a03.q1k chr12 359 62 701258 701257 C 298 0.00 609 reject_low 7 ALIGNMENT 20 YS2-20a03.p1k chr16 239 198 897089 897130 C 42 97.62 576 reject_low 12 ALIGNMENT 0 YS2-20a03.p1k chr12 62 189 701210 701209 F 128 0.00 576 reject_low 10 ALIGNMENT 0 YS2-20a03.p1k chr12 238 576 701257 701256 F 339 0.00 576 reject_low 10 ALIGNMENT 0 YS2-20a03.p1k chr05 197 62 142990 142989 C 136 0.00 576 reject_low 8 ALIGNMENT 0 YS2-20a03.q1k chr12 609 408 701211 701210 C 202 0.00 609 reject_low 7 ALIGNMENT 23 YS2-20a03.q1k chr05 400 359 81198 81239 C 42 100.00 609 reject_low 9 ALIGNMENT 0 YS2-20a03.q1k chr05 358 62 81240 81239 C 297 0.00 609 reject_low 9 ALIGNMENT 0 YS2-20a03.q1k chr04 609 424 390447 390446 C 186 0.00 609 reject_low 2 ALIGNMENT 23 YS2-20a03.q1k chr12 407 360 701210 701257 C 48 95.83 609 reject_low 7 ALIGNMENT 23 YS2-20a03.p1k chr05 197 238 81198 81239 F 42 100.00 576 reject_low 11 ALIGNMENT 0 YS2-20a03.q1k chr16 609 408 650496 650495 C 202 0.00 609 reject_low 4 ALIGNMENT 0 YS2-20a03.q1k chr07 571 609 467919 467918 F 39 0.00 609 accept_chi 0 ALIGNMENT 28 YS2-20a03.q1k chr16 407 354 650495 650548 C 54 96.30 609 reject_low 4 ALIGNMENT 486 YS2-20a03.q1k chr07 42 570 467393 467919 F 529 98.68 609 accept_chi 0 ALIGNMENT 0 YS2-20a03.p1k chr07 576 557 467394 467393 C 20 0.00 576 accept_chi 1 ALIGNMENT 0 YS2-20a03.p1k chr16 244 576 650548 650547 F 333 0.00 576 reject_low 5 ALIGNMENT 0 YS2-20a03.p1k chr16 576 240 897090 897089 C 337 0.00 576 reject_low 12 ALIGNMENT 27 YS2-20a03.q1k chr04 423 360 390446 390509 C 64 89.06 609 reject_low 2 ALIGNMENT 483 YS2-20a03.p1k chr07 556 29 467393 467919 C 528 98.67 576 accept_chi 1 ALIGNMENT 23 YS2-20a03.p1k chr05 245 198 142942 142989 C 48 97.92 576 reject_low 8 ALIGNMENT 0 YS2-20a03.p1k chr16 197 62 897131 897130 C 136 0.00 576 reject_low 12 ALIGNMENT 0 YS2-20a03.q1k chr05 400 609 142989 142988 F 210 0.00 609 reject_low 6 ALIGNMENT 0 YS2-20a03.q1k chr05 609 401 81199 81198 C 209 0.00 609 reject_low 9 ALIGNMENT 0 YS2-20a03.p1k chr16 62 189 650495 650494 F 128 0.00 576 reject_low 5 ALIGNMENT 0 YS2-20a03.q1k chr05 62 351 142942 142941 F 290 0.00 609 reject_low 6 ALIGNMENT 0 YS2-20a03.p1k chr05 62 196 81198 81197 F 135 0.00 576 reject_low 11 ALIGNMENT 0 YS2-20a05.p1k chrm 661 145 37540 37539 C 517 0.00 1339 reject_low 1 ALIGNMENT 817 YS2-20a05.q1k chrm 1149 34 38001 39106 C 1116 97.40 1153 accept 0 ALIGNMENT 0 YS2-20a05.p1k chrm 104 77 37579 37578 C 28 0.00 1339 reject_low 1 ALIGNMENT 20 YS2-20a05.p1k chrm 144 105 37539 37578 C 40 100.00 1339 reject_low 1 ALIGNMENT 649 YS2-20a05.p1k chrm 30 1075 37458 38501 F 1046 93.12 1339 accept 0 ALIGNMENT 0 YS2-20a06.p1k chr13 76 62 289178 289177 C 15 0.00 1399 reject_low 8 ALIGNMENT 0 YS2-20a06.p1k chr10 85 62 28011 28010 C 24 0.00 1399 reject_low 9 ALIGNMENT 0 YS2-20a06.p1k chr04 62 148 12318 12317 F 87 0.00 1399 reject_low 13 ALIGNMENT 0 YS2-20a06.q1k chr14 239 742 773416 773919 F 504 0.00 1167 reject_low 16 ALIGNMENT 1058 YS2-20a06.q1k chr04 1160 31 1162956 1164089 C 1130 98.67 1167 accept 0,1 ALIGNMENT 0 YS2-20a06.p1k chr08 62 91 291517 291516 F 30 0.00 1399 reject_low 7 ALIGNMENT 117 YS2-20a06.q1k chr13 437 1068 289029 289662 F 632 74.37 1167 reject_low 12 ALIGNMENT 254 YS2-20a06.p1k chr08 92 989 291517 292411 F 898 77.39 1399 reject_low 7 ALIGNMENT 843 YS2-20a06.p1k chr04 28 1063 1154744 1155768 F 1036 95.66 1399 accept 0 ALIGNMENT 20 YS2-20a06.p1k chr14 710 424 773129 773415 C 287 70.03 1399 reject_low 15 ALIGNMENT 474 YS2-20a06.p1k chr08 42 989 287635 288579 F 948 84.60 1399 reject_low 2 ALIGNMENT 0 YS2-20a06.p1k chr09 379 62 20329 20328 C 318 0.00 1399 reject_low 10 ALIGNMENT 292 YS2-20a06.q1k chr08 1027 31 287226 288224 C 997 77.93 1167 reject_low 6 ALIGNMENT 36 YS2-20a06.q1k chr14 743 967 773920 774144 F 225 74.22 1167 reject_low 16 ALIGNMENT 442 YS2-20a06.q1k chr04 1147 31 1154228 1155348 C 1117 80.84 1167 reject_low 3 ALIGNMENT 0 YS2-20a06.p1k chr04 62 91 1163550 1163549 F 30 0.00 1399 reject_low 5 ALIGNMENT 24 YS2-20a06.p1k chr10 253 149 733293 733397 C 105 75.24 1399 reject_low 14 ALIGNMENT 57 YS2-20a06.q1k chr13 101 238 288693 288830 F 138 81.16 1167 reject_low 12 ALIGNMENT 0 YS2-20a06.p1k chr10 754 580 27518 27517 C 175 0.00 1399 reject_low 9 ALIGNMENT 0 YS2-20a06.q1k chr13 62 100 288693 288692 F 39 0.00 1167 reject_low 12 ALIGNMENT 0 YS2-20a06.p1k chr14 423 62 773416 773415 C 362 0.00 1399 reject_low 15 ALIGNMENT 0 YS2-20a06.p1k chr10 754 254 733294 733293 C 501 0.00 1399 reject_low 14 ALIGNMENT 421 YS2-20a06.p1k chr04 92 984 1163550 1164439 F 893 83.65 1399 reject_low 5 ALIGNMENT 843 YS2-20a06.p1k chr04 28 1063 1160136 1161160 F 1036 95.66 1399 accept 1 ALIGNMENT 24 YS2-20a06.p1k chr04 149 253 12318 12422 F 105 75.24 1399 reject_low 13 ALIGNMENT 57 YS2-20a06.p1k chr09 856 380 19853 20328 C 477 72.12 1399 reject_low 10 ALIGNMENT 0 YS2-20a06.p1k chr14 754 711 773130 773129 C 44 0.00 1399 reject_low 15 ALIGNMENT 0 YS2-20a06.p1k chr04 254 754 12422 12421 F 501 0.00 1399 reject_low 13 ALIGNMENT 540 YS2-20a06.q1k chr08 1147 35 290936 292052 C 1113 83.65 1167 reject_low 2 ALIGNMENT 0 YS2-20a06.q1k chr06 62 728 113561 113560 F 667 0.00 1167 reject_low 11 ALIGNMENT 142 YS2-20a06.p1k chr13 840 77 288414 289177 C 764 74.21 1399 reject_low 8 ALIGNMENT 439 YS2-20a06.q1k chr04 1112 31 1159655 1160740 C 1082 81.24 1167 reject_low 4 ALIGNMENT 32 YS2-20a06.q1k chr14 35 238 773212 773415 F 204 72.55 1167 reject_low 16 ALIGNMENT 47 YS2-20a06.q1k chr06 729 1041 113561 113875 F 313 73.48 1167 reject_low 11 ALIGNMENT 0 YS2-20a06.q1k chr13 239 436 288831 289028 F 198 0.00 1167 reject_low 12 ALIGNMENT 0 YS2-20a06.p1k chr10 148 62 733398 733397 C 87 0.00 1399 reject_low 14 ALIGNMENT 122 YS2-20a06.p1k chr10 579 86 27517 28010 C 494 76.52 1399 reject_low 9 ALIGNMENT 901 YS2-20a07.q1k chr12 1160 31 460023 461162 C 1130 94.60 1163 accept 0 ALIGNMENT 0 YS2-20a07.q1k chr12 803 628 451420 451419 C 176 0.00 1163 reject_low 2 ALIGNMENT 1016 YS2-20a07.p1k chr12 29 1272 467019 468278 F 1244 95.26 1352 reject_low 1 ALIGNMENT 516 YS2-20a07.q1k chr12 627 31 451419 452025 C 597 96.98 1163 reject_low 2 ALIGNMENT 0 YS2-20a07.q1k chr12 803 270 489755 489754 C 534 0.00 1163 reject_low 3 ALIGNMENT 211 YS2-20a07.q1k chr12 269 31 489754 489993 C 239 96.65 1163 reject_low 3 ALIGNMENT 1016 YS2-20a07.p1k chr12 29 1272 457882 459141 F 1244 95.26 1352 accept 0 ALIGNMENT 0 YS2-20a08.q1k vc_5 174 62 37 36 C 113 0.00 213 reject_low 13 ALIGNMENT 0 YS2-20a08.q1k vc_7 62 175 13525 13524 F 114 0.00 213 reject_low 12 ALIGNMENT 285 YS2-20a08.p1k vc_7 1 593 456 1042 F 593 83.64 858 reject_vc 6 ALIGNMENT 0 YS2-20a08.q1k chr07 213 174 976172 976171 C 40 0.00 213 accept 0 ALIGNMENT 38 YS2-20a08.q1k vc_7 176 213 13525 13562 F 38 100.00 213 reject_low 12 ALIGNMENT 0 YS2-20a08.q1k vc_5 174 62 5064 5063 C 113 0.00 213 reject_low 11 ALIGNMENT 291 YS2-20a08.p1k vc_5 593 1 4083 4669 C 593 83.98 858 reject_vc 4 ALIGNMENT 291 YS2-20a08.p1k vc_2 593 1 1163 1749 C 593 83.98 858 reject_vc 2 ALIGNMENT 285 YS2-20a08.p1k vc_7 1 593 13918 14504 F 593 83.64 858 reject_vc 7 ALIGNMENT 291 YS2-20a08.p1k vc_1 593 1 1163 1749 C 593 83.98 858 reject_vc 1 ALIGNMENT 41 YS2-20a08.q1k vc_3 213 173 2472 2512 C 41 100.00 213 reject_low 9 ALIGNMENT 136 YS2-20a08.q1k chr07 173 37 976171 976307 C 137 100.00 213 accept 0 ALIGNMENT 41 YS2-20a08.q1k vc_4 173 213 5831 5871 F 41 100.00 213 reject_low 10 ALIGNMENT 0 YS2-20a08.q1k vc_3 172 62 2513 2512 C 111 0.00 213 reject_low 9 ALIGNMENT 0 YS2-20a08.q1k vc_4 62 172 5831 5830 F 111 0.00 213 reject_low 10 ALIGNMENT 39 YS2-20a08.q1k vc_5 213 175 5025 5063 C 39 100.00 213 reject_low 11 ALIGNMENT 288 YS2-20a08.p1k vc_6 1 587 3712 4292 F 587 83.99 858 reject_vc 5 ALIGNMENT 41 YS2-20a08.q1k vc_1 213 173 2472 2512 C 41 100.00 213 reject_low 8 ALIGNMENT 291 YS2-20a08.p1k vc_3 593 1 1163 1749 C 593 83.98 858 reject_vc 3 ALIGNMENT 36 YS2-20a08.q1k vc_5 210 175 1 36 C 36 100.00 213 reject_low 13 ALIGNMENT 0 YS2-20a08.q1k vc_1 172 62 2513 2512 C 111 0.00 213 reject_low 8 ALIGNMENT 793 YS2-20a10.p1k chr12 43 1030 435942 436935 F 988 95.65 1337 accept 0 ALIGNMENT 989 YS2-20a10.q1k chr12 1207 52 438032 439182 C 1156 96.54 1216 accept 0 ALIGNMENT 111 YS2-20a11.p1k chr04 206 29 1401623 1401798 C 178 88.76 1594 accept 0 ALIGNMENT 0 YS2-20a13.q1k chr04 489 886 221803 221802 F 398 0.00 1187 reject_low 1 ALIGNMENT 785 YS2-20a13.p1k chr04 1063 32 134418 135446 C 1032 92.83 1369 accept 0 ALIGNMENT 73 YS2-20a13.q1k chr04 392 488 221707 221803 F 97 95.88 1187 reject_low 1 ALIGNMENT 945 YS2-20a13.q1k chr04 48 1181 130045 131176 F 1134 96.03 1187 accept 0 ALIGNMENT 0 YS2-20a13.q1k chr04 62 391 221707 221706 F 330 0.00 1187 reject_low 1 ALIGNMENT 1048 YS2-20a14.q1k chr07 1205 36 616928 618095 C 1170 97.52 1209 accept 0 ALIGNMENT 800 YS2-20a14.p1k chr07 37 1016 612168 613145 F 980 95.10 1441 accept 0 ALIGNMENT 127 YS2-20a15.p1k vc_5 566 372 4828 5023 C 195 88.72 1326 reject_low 2 ALIGNMENT 127 YS2-20a15.p1k vc_7 372 566 13564 13759 F 195 88.72 1326 reject_low 8 ALIGNMENT 0 YS2-20a15.q1k vc_4 464 92 5813 5812 C 373 0.00 1185 reject_low 9 ALIGNMENT 0 YS2-20a15.q1k vc_4 92 464 126 125 F 373 0.00 1185 reject_low 15 ALIGNMENT 0 YS2-20a15.q1k vc_4 860 554 111 1445 C 307 0.00 1185 reject_low 22 ALIGNMENT 0 YS2-20a15.p1k vc_3 371 62 2104 2103 C 310 0.00 1326 reject_low 7 ALIGNMENT 0 YS2-20a15.p1k vc_7 62 371 102 101 F 310 0.00 1326 reject_low 3 ALIGNMENT 0 YS2-20a15.q1k vc_3 570 466 2473 2472 C 105 0.00 1185 reject_low 18 ALIGNMENT 0 YS2-20a15.p1k chr16 353 394 27966 27965 F 42 0.00 1326 ambiguous_tel 1 ALIGNMENT 24 YS2-20a15.p1k vc_1 400 372 2441 2470 C 29 96.55 1326 reject_low 20 ALIGNMENT 0 YS2-20a15.q1k vc_4 92 424 5831 5830 F 333 0.00 1185 reject_low 14 ALIGNMENT 431 YS2-20a15.q1k vc_5 465 1134 2398 3059 F 670 89.55 1185 reject_low 2 ALIGNMENT 44 YS2-20a15.q1k vc_4 919 861 51 110 C 59 91.53 1185 reject_low 22 ALIGNMENT 127 YS2-20a15.p1k vc_1 566 372 1908 2103 C 195 88.72 1326 reject_low 5 ALIGNMENT 127 YS2-20a15.p1k vc_7 372 566 102 297 F 195 88.72 1326 reject_low 3 ALIGNMENT 0 YS2-20a15.q1k vc_2 92 464 2164 2163 F 373 0.00 1185 reject_low 11 ALIGNMENT 127 YS2-20a15.p1k vc_3 566 372 1908 2103 C 195 88.72 1326 reject_low 7 ALIGNMENT 364 YS2-20a15.q1k vc_3 465 919 2531 2987 F 455 93.63 1185 reject_low 12 ALIGNMENT 45 YS2-20a15.q1k vc_7 1036 926 4589 4699 C 111 81.98 1185 reject_low 13 ALIGNMENT 431 YS2-20a15.q1k vc_7 1134 465 2066 2727 C 670 89.55 1185 reject_low 3 ALIGNMENT 35 YS2-20a15.q1k vc_4 425 465 5831 5871 F 41 95.12 1185 reject_low 14 ALIGNMENT 24 YS2-20a15.p1k vc_3 400 372 2441 2470 C 29 96.55 1326 reject_low 21 ALIGNMENT 127 YS2-20a15.p1k vc_2 566 372 1908 2103 C 195 88.72 1326 reject_low 6 ALIGNMENT 127 YS2-20a15.p1k vc_4 372 566 5873 6068 F 195 88.72 1326 reject_low 4 ALIGNMENT 0 YS2-20a15.p1k vc_4 62 371 5873 5872 F 310 0.00 1326 reject_low 4 ALIGNMENT 0 YS2-20a15.q1k vc_7 464 92 2728 2727 C 373 0.00 1185 reject_low 3 ALIGNMENT 0 YS2-20a15.q1k vc_4 466 465 5872 6353 F 0 0.00 1185 reject_low 14 ALIGNMENT 364 YS2-20a15.q1k vc_1 465 919 2531 2987 F 455 93.63 1185 reject_low 10 ALIGNMENT 0 YS2-20a15.q1k vc_3 92 464 2531 2530 F 373 0.00 1185 reject_low 12 ALIGNMENT 364 YS2-20a15.q1k vc_2 465 919 2164 2620 F 455 93.63 1185 reject_low 11 ALIGNMENT 0 YS2-20a15.q1k vc_4 627 860 288 1549 F 234 0.00 1185 reject_low 15 ALIGNMENT 0 YS2-20a15.q1k vc_4 860 92 6338 6337 C 769 0.00 1185 reject_low 4 ALIGNMENT 0 YS2-20a15.p1k vc_2 371 62 2104 2103 C 310 0.00 1326 reject_low 6 ALIGNMENT 0 YS2-20a15.q1k vc_5 426 92 5064 5063 C 335 0.00 1185 reject_low 19 ALIGNMENT 33 YS2-20a15.q1k vc_5 465 427 5025 5063 C 39 94.87 1185 reject_low 19 ALIGNMENT 400 YS2-20a15.q1k vc_4 1036 465 5238 5812 C 572 90.73 1185 reject_low 9 ALIGNMENT 0 YS2-20a15.q1k vc_5 92 464 2398 2397 F 373 0.00 1185 reject_low 2 ALIGNMENT 35 YS2-20a15.q1k vc_3 465 425 2472 2512 C 41 95.12 1185 reject_low 18 ALIGNMENT 44 YS2-20a15.q1k vc_4 919 861 6278 6337 C 59 91.53 1185 reject_low 4 ALIGNMENT 0 YS2-20a15.q1k vc_4 464 92 1535 1534 C 373 0.00 1185 reject_low 22 ALIGNMENT 63 YS2-20a15.q1k vc_4 929 1134 1879 2075 F 206 81.07 1185 reject_low 15 ALIGNMENT 145 YS2-20a15.q1k vc_4 465 626 6353 6514 F 162 96.91 1185|1,0 reject_low 14 ALIGNMENT 0 YS2-20a15.q1k vc_4 920 928 1610 1878 F 9 0.00 1185 reject_low 15 ALIGNMENT 0 YS2-20a15.q1k vc_1 92 464 2531 2530 F 373 0.00 1185 reject_low 10 ALIGNMENT 0 YS2-20a15.q1k vc_1 570 466 2473 2472 C 105 0.00 1185 reject_low 16 ALIGNMENT 0 YS2-20a15.q1k vc_5 570 466 5026 5025 C 105 0.00 1185 reject_low 19 ALIGNMENT 78 YS2-20a15.q1k vc_4 553 465 1446 1534 C 89 96.63 1185 reject_low 22 ALIGNMENT 0 YS2-20a15.q1k vc_2 424 92 2146 2145 C 333 0.00 1185 reject_low 17 ALIGNMENT 0 YS2-20a15.q1k vc_2 570 466 2106 2105 C 105 0.00 1185 reject_low 17 ALIGNMENT 44 YS2-20a15.q1k vc_4 861 919 1550 1609 F 59 91.53 1185 reject_low 15 ALIGNMENT 0 YS2-20a15.p1k vc_3 371 62 2471 2470 C 310 0.00 1326 reject_low 21 ALIGNMENT 312 YS2-20a15.p1k chr16 12 352 27626 27966 F 341 97.95 1326 ambiguous_tel 1 ALIGNMENT 0 YS2-20a15.p1k vc_5 371 62 5024 5023 C 310 0.00 1326 reject_low 2 ALIGNMENT 0 YS2-20a15.p1k vc_1 371 62 2471 2470 C 310 0.00 1326 reject_low 20 ALIGNMENT 0 YS2-20a15.q1k vc_7 925 920 4700 4925 C 6 0.00 1185 reject_low 13 ALIGNMENT 0 YS2-20a15.p1k vc_1 371 62 2104 2103 C 310 0.00 1326 reject_low 5 ALIGNMENT 0 YS2-20a15.q1k vc_7 676 92 5171 5170 C 585 0.00 1185 reject_low 13 ALIGNMENT 325 YS2-20a15.q1k chr16 424 33 27575 27966 C 392 95.15 1185 ambiguous_tel 0 ALIGNMENT 145 YS2-20a15.q1k vc_4 465 626 126 287 F 162 96.91 1185 reject_low 15 ALIGNMENT 175 YS2-20a15.q1k vc_7 919 677 4926 5170 C 243 90.95 1185 reject_low 13 ALIGNMENT 0 YS2-20a15.q1k chr16 570 425 27576 27575 C 146 0.00 1185 ambiguous_tel 0 ALIGNMENT 0 YS2-20a15.q1k vc_1 424 92 2513 2512 C 333 0.00 1185 reject_low 16 ALIGNMENT 35 YS2-20a15.q1k vc_1 465 425 2472 2512 C 41 95.12 1185 reject_low 16 ALIGNMENT 0 YS2-20a15.q1k vc_3 424 92 2513 2512 C 333 0.00 1185 reject_low 18 ALIGNMENT 0 YS2-20a15.p1k vc_7 62 371 13564 13563 F 310 0.00 1326 reject_low 8 ALIGNMENT 35 YS2-20a15.q1k vc_2 465 425 2105 2145 C 41 95.12 1185 reject_low 17 ALIGNMENT 41 YS2-20a16.q1k vc_1 209 169 2472 2512 C 41 100.00 209 reject_low 1 ALIGNMENT 0 YS2-20a16.q1k chr08 170 209 116428 116427 F 40 0.00 209 accept 0 ALIGNMENT 39 YS2-20a16.q1k vc_5 209 171 5025 5063 C 39 100.00 209 reject_low 4 ALIGNMENT 0 YS2-20a16.q1k vc_5 170 62 37 36 C 109 0.00 209 reject_low 6 ALIGNMENT 38 YS2-20a16.q1k vc_7 172 209 13525 13562 F 38 100.00 209 reject_low 5 ALIGNMENT 0 YS2-20a16.q1k vc_7 62 171 13525 13524 F 110 0.00 209 reject_low 5 ALIGNMENT 0 YS2-20a16.q1k vc_3 168 62 2513 2512 C 107 0.00 209 reject_low 2 ALIGNMENT 0 YS2-20a16.q1k vc_4 62 168 5831 5830 F 107 0.00 209 reject_low 3 ALIGNMENT 0 YS2-20a16.q1k vc_1 168 62 2513 2512 C 107 0.00 209 reject_low 1 ALIGNMENT 121 YS2-20a16.q1k chr08 34 169 116293 116428 F 136 97.79 209 accept 0 ALIGNMENT 41 YS2-20a16.q1k vc_3 209 169 2472 2512 C 41 100.00 209 reject_low 2 ALIGNMENT 41 YS2-20a16.q1k vc_4 169 209 5831 5871 F 41 100.00 209 reject_low 3 ALIGNMENT 0 YS2-20a16.q1k vc_5 170 62 5064 5063 C 109 0.00 209 reject_low 4 ALIGNMENT 36 YS2-20a16.q1k vc_5 206 171 1 36 C 36 100.00 209 reject_low 6 ALIGNMENT 174 YS2-20a17.p1k chr15 256 24 742628 742863 C 233 92.70 1435 accept_chi 8 ALIGNMENT 0 YS2-20a17.p1k chr15 411 257 742629 742628 C 155 0.00 1435 accept_chi 8 ALIGNMENT 39 YS2-20a17.q1k vc_5 317 279 5025 5063 C 39 100.00 317 reject_low 15 ALIGNMENT 41 YS2-20a17.q1k vc_1 317 277 2472 2512 C 41 100.00 317 reject_low 11 ALIGNMENT 0 YS2-20a17.p1k vc_1 273 92 2106 2105 C 182 0.00 1435 reject_vc 0 ALIGNMENT 41 YS2-20a17.q1k vc_3 317 277 2472 2512 C 41 100.00 317 reject_low 13 ALIGNMENT 0 YS2-20a17.p1k vc_3 411 305 2442 2441 C 107 0.00 1435 reject_low 10 ALIGNMENT 0 YS2-20a17.q1k vc_5 278 103 5064 5063 C 176 0.00 317 reject_low 15 ALIGNMENT 210 YS2-20a17.p1k vc_7 274 536 13562 13825 F 263 93.54 1435 reject_vc 6 ALIGNMENT 0 YS2-20a17.p1k vc_3 273 92 2473 2472 C 182 0.00 1435 reject_low 10 ALIGNMENT 210 YS2-20a17.p1k vc_3 536 274 1842 2105 C 263 93.54 1435 reject_vc 2 ALIGNMENT 0 YS2-20a17.p1k vc_4 92 273 5871 5870 F 182 0.00 1435 reject_vc 3 ALIGNMENT 210 YS2-20a17.p1k vc_7 274 536 100 363 F 263 93.54 1435 reject_vc 5 ALIGNMENT 0 YS2-20a17.q1k vc_4 103 276 5831 5830 F 174 0.00 317 reject_low 14 ALIGNMENT 210 YS2-20a17.p1k vc_1 536 274 1842 2105 C 263 93.54 1435 reject_vc 0 ALIGNMENT 0 YS2-20a17.p1k vc_5 273 92 5026 5025 C 182 0.00 1435 reject_vc 4 ALIGNMENT 194 YS2-20a17.q1k chr15 46 276 742628 742859 F 231 95.67 317 accept_chi 7 ALIGNMENT 0 YS2-20a17.p1k vc_2 273 92 2106 2105 C 182 0.00 1435 reject_vc 1 ALIGNMENT 0 YS2-20a17.p1k vc_1 411 305 2442 2441 C 107 0.00 1435 reject_low 9 ALIGNMENT 0 YS2-20a17.q1k vc_3 276 103 2513 2512 C 174 0.00 317 reject_low 13 ALIGNMENT 41 YS2-20a17.q1k vc_4 277 317 5831 5871 F 41 100.00 317 reject_low 14 ALIGNMENT 0 YS2-20a17.q1k vc_7 103 279 13525 13524 F 177 0.00 317 reject_low 16 ALIGNMENT 0 YS2-20a17.p1k vc_7 92 273 13562 13561 F 182 0.00 1435 reject_vc 6 ALIGNMENT 0 YS2-20a17.q1k vc_2 276 103 2146 2145 C 174 0.00 317 reject_low 12 ALIGNMENT 26 YS2-20a17.p1k vc_1 304 274 2441 2472 C 31 96.77 1435 reject_low 9 ALIGNMENT 210 YS2-20a17.p1k vc_4 274 536 5871 6134 F 263 93.54 1435 reject_vc 3 ALIGNMENT 210 YS2-20a17.p1k vc_5 536 274 4762 5025 C 263 93.54 1435 reject_vc 4 ALIGNMENT 0 YS2-20a17.p1k vc_3 273 92 2106 2105 C 182 0.00 1435 reject_vc 2 ALIGNMENT 26 YS2-20a17.p1k vc_3 304 274 2441 2472 C 31 96.77 1435 reject_low 10 ALIGNMENT 0 YS2-20a17.p1k vc_7 92 273 100 99 F 182 0.00 1435 reject_vc 5 ALIGNMENT 0 YS2-20a17.q1k vc_1 276 103 2513 2512 C 174 0.00 317 reject_low 11 ALIGNMENT 36 YS2-20a17.q1k vc_5 314 279 1 36 C 36 100.00 317 reject_low 17 ALIGNMENT 38 YS2-20a17.q1k vc_7 280 317 13525 13562 F 38 100.00 317 reject_low 16 ALIGNMENT 210 YS2-20a17.p1k vc_2 536 274 1842 2105 C 263 93.54 1435 reject_vc 1 ALIGNMENT 0 YS2-20a17.p1k vc_1 273 92 2473 2472 C 182 0.00 1435 reject_low 9 ALIGNMENT 0 YS2-20a17.q1k vc_5 278 103 37 36 C 176 0.00 317 reject_low 17 ALIGNMENT 41 YS2-20a17.q1k vc_2 317 277 2105 2145 C 41 100.00 317 reject_low 12 ALIGNMENT 0 YS2-20a17.q1k chr15 277 317 742859 742858 F 41 0.00 317 accept_chi 7 ALIGNMENT 85 YS2-20a18.p1k chr04 99 188 437769 437858 F 90 98.89 1373 reject_low 8 ALIGNMENT 89 YS2-20a18.p1k chr07 188 98 561658 561748 C 91 100.00 1373 reject_low 5 ALIGNMENT 0 YS2-20a18.p1k chr07 770 189 561659 561658 C 582 0.00 1373 reject_low 5 ALIGNMENT 0 YS2-20a18.p1k chr05 62 95 86601 86600 F 34 0.00 1373 reject_low 2 ALIGNMENT 0 YS2-20a18.p1k chr07 97 62 561749 561748 C 36 0.00 1373 reject_low 5 ALIGNMENT 0 YS2-20a18.p1k chr04 189 770 437858 437857 F 582 0.00 1373 reject_low 8 ALIGNMENT 0 YS2-20a18.p1k chr13 770 190 259150 259149 C 581 0.00 1373 reject_low 3 ALIGNMENT 0 YS2-20a18.p1k chr01 770 190 182508 182507 C 581 0.00 1373 reject_low 4 ALIGNMENT 89 YS2-20a18.p1k chr02 99 189 227078 227168 F 91 100.00 1373 reject_low 6 ALIGNMENT 0 YS2-20a18.p1k chr10 98 62 524008 524007 C 37 0.00 1373 reject_low 1 ALIGNMENT 83 YS2-20a18.p1k chr04 182 99 980966 981049 C 84 100.00 1373 reject_low 10 ALIGNMENT 0 YS2-20a18.p1k chr04 62 98 1305620 1305619 F 37 0.00 1373 reject_low 9 ALIGNMENT 93 YS2-20a18.p1k chr05 96 195 86601 86701 F 100 99.00 1373 reject_low 2 ALIGNMENT 90 YS2-20a18.p1k chr01 189 98 182507 182598 C 92 100.00 1373 reject_low 4 ALIGNMENT 92 YS2-20a18.p1k chr13 189 96 259149 259242 C 94 100.00 1373 reject_low 3 ALIGNMENT 89 YS2-20a18.p1k chr10 204 99 523902 524007 C 106 96.23 1373 reject_low 1 ALIGNMENT 0 YS2-20a18.p1k chr04 189 770 1305710 1305709 F 582 0.00 1373 reject_low 9 ALIGNMENT 0 YS2-20a18.p1k chr10 770 205 523903 523902 C 566 0.00 1373 reject_low 1 ALIGNMENT 0 YS2-20a18.p1k chr04 770 183 980967 980966 C 588 0.00 1373 reject_low 10 ALIGNMENT 998 YS2-20a18.q1k chr12 44 1215 163613 164787 F 1172 95.48 1218 accept 0 ALIGNMENT 0 YS2-20a18.p1k chr13 95 62 259243 259242 C 34 0.00 1373 reject_low 3 ALIGNMENT 0 YS2-20a18.p1k chr08 770 190 133011 133010 C 581 0.00 1373 reject_low 7 ALIGNMENT 0 YS2-20a18.p1k chr04 98 62 981050 981049 C 37 0.00 1373 reject_low 10 ALIGNMENT 0 YS2-20a18.p1k chr02 190 770 227168 227167 F 581 0.00 1373 reject_low 6 ALIGNMENT 0 YS2-20a18.p1k chr08 97 62 133102 133101 C 36 0.00 1373 reject_low 7 ALIGNMENT 84 YS2-20a18.p1k chr04 99 188 1305620 1305710 F 90 98.89 1373 reject_low 9 ALIGNMENT 0 YS2-20a18.p1k chr05 196 770 86701 86700 F 575 0.00 1373 reject_low 2 ALIGNMENT 0 YS2-20a18.p1k chr04 62 98 437769 437768 F 37 0.00 1373 reject_low 8 ALIGNMENT 0 YS2-20a18.p1k chr01 97 62 182599 182598 C 36 0.00 1373 reject_low 4 ALIGNMENT 866 YS2-20a18.p1k chr12 1049 38 167089 168086 C 1012 97.33 1373 accept 0 ALIGNMENT 0 YS2-20a18.p1k chr02 62 98 227078 227077 F 37 0.00 1373 reject_low 6 ALIGNMENT 84 YS2-20a18.p1k chr08 189 98 133010 133101 C 92 97.83 1373 reject_low 7 ALIGNMENT 0 YS2-20a19.p1k vc_3 828 62 2473 2472 C 767 0.00 1386 reject_low 18 ALIGNMENT 121 YS2-20a19.q1k vc_4 856 1015 126 287 F 160 91.88 1161 reject_low 10 ALIGNMENT 0 YS2-20a19.q1k vc_5 817 62 5064 5063 C 756 0.00 1161 reject_low 16 ALIGNMENT 23 YS2-20a19.p1k vc_1 860 829 2441 2472 C 32 93.75 1386 reject_low 17 ALIGNMENT 0 YS2-20a19.q1k vc_2 816 62 2145 2144 C 755 0.00 1161 reject_low 14 ALIGNMENT 0 YS2-20a19.q1k vc_1 816 62 2512 2511 C 755 0.00 1161 reject_low 13 ALIGNMENT 210 YS2-20a19.q1k vc_2 856 1161 2164 2477 F 306 90.85 1161 reject_low 5 ALIGNMENT 0 YS2-20a19.q1k vc_4 855 62 5813 5812 C 794 0.00 1161 reject_low 9 ALIGNMENT 0 YS2-20a19.q1k vc_3 884 857 2473 2472 C 28 0.00 1161 reject_low 15 ALIGNMENT 0 YS2-20a19.q1k vc_7 1013 62 6412 6411 C 952 0.00 1161 reject_low 20 ALIGNMENT 0 YS2-20a19.p1k vc_1 828 62 2106 2105 C 767 0.00 1386 reject_low 2 ALIGNMENT 210 YS2-20a19.q1k vc_5 856 1161 2398 2711 F 306 90.85 1161 reject_low 7 ALIGNMENT 0 YS2-20a19.q1k vc_5 884 857 5026 5025 C 28 0.00 1161 reject_low 16 ALIGNMENT 0 YS2-20a19.q1k vc_4 62 855 126 125 F 794 0.00 1161 reject_low 10 ALIGNMENT 81 YS2-20a19.p1k vc_1 1026 829 1909 2105 C 198 82.83 1386 reject_low 2 ALIGNMENT 81 YS2-20a19.p1k vc_3 1026 829 1909 2105 C 198 82.83 1386 reject_low 3 ALIGNMENT 0 YS2-20a19.p1k vc_3 828 62 2106 2105 C 767 0.00 1386 reject_low 3 ALIGNMENT 0 YS2-20a19.q1k vc_1 884 857 2473 2472 C 28 0.00 1161 reject_low 13 ALIGNMENT 48 YS2-20a19.q1k vc_7 1161 1062 5069 5172 C 100 85.00 1161|0,1 reject_low 20 ALIGNMENT 67 YS2-20a19.q1k vc_4 936 856 1453 1534 C 81 92.59 1161 reject_low 12 ALIGNMENT 0 YS2-20a19.q1k vc_3 62 855 2531 2530 F 794 0.00 1161 reject_low 6 ALIGNMENT 0 YS2-20a19.q1k vc_5 817 62 37 36 C 756 0.00 1161 reject_low 19 ALIGNMENT 0 YS2-20a19.q1k vc_5 62 855 2398 2397 F 794 0.00 1161 reject_low 7 ALIGNMENT 23 YS2-20a19.p1k vc_3 860 829 2441 2472 C 32 93.75 1386 reject_low 18 ALIGNMENT 36 YS2-20a19.q1k vc_1 856 817 2472 2511 C 40 95.00 1161 reject_low 13 ALIGNMENT 0 YS2-20a19.q1k vc_2 62 855 2164 2163 F 794 0.00 1161 reject_low 5 ALIGNMENT 706 YS2-20a19.p1k chr11 34 809 186589 187365 F 776 98.32 1386 accept_chi 1 ALIGNMENT 0 YS2-20a19.q1k vc_1 62 855 2531 2530 F 794 0.00 1161 reject_low 4 ALIGNMENT 36 YS2-20a19.q1k vc_2 856 817 2105 2144 C 40 95.00 1161 reject_low 14 ALIGNMENT 210 YS2-20a19.q1k vc_1 856 1161 2531 2844 F 306 90.85 1161 reject_low 4 ALIGNMENT 0 YS2-20a19.q1k vc_2 884 857 2106 2105 C 28 0.00 1161 reject_low 14 ALIGNMENT 0 YS2-20a19.q1k vc_4 855 62 1535 1534 C 794 0.00 1161 reject_low 12 ALIGNMENT 0 YS2-20a19.q1k vc_4 62 816 5832 5831 F 755 0.00 1161 reject_low 11 ALIGNMENT 712 YS2-20a19.q1k chr11 817 41 186589 187365 C 777 98.46 1161 accept_chi 0 ALIGNMENT 0 YS2-20a19.q1k vc_4 857 856 5872 6353 F 0 0.00 1161 reject_low 11 ALIGNMENT 210 YS2-20a19.q1k vc_3 856 1161 2531 2844 F 306 90.85 1161 reject_low 6 ALIGNMENT 0 YS2-20a19.q1k chr11 884 818 186590 186589 C 67 0.00 1161 accept_chi 0 ALIGNMENT 0 YS2-20a19.q1k vc_7 855 62 2728 2727 C 794 0.00 1161 reject_low 8 ALIGNMENT 210 YS2-20a19.q1k vc_7 1161 856 2414 2727 C 306 90.85 1161 reject_low 8 ALIGNMENT 121 YS2-20a19.q1k vc_4 856 1015 6353 6514 F 160 91.88 1161|1,0 reject_low 11 ALIGNMENT 36 YS2-20a19.q1k vc_3 856 817 2472 2511 C 40 95.00 1161 reject_low 15 ALIGNMENT 0 YS2-20a19.p1k vc_1 828 62 2473 2472 C 767 0.00 1386 reject_low 17 ALIGNMENT 0 YS2-20a19.q1k vc_5 884 854 2 1 C 31 0.00 1161 reject_low 19 ALIGNMENT 41 YS2-20a19.q1k vc_7 1063 1014 6360 6411 C 50 96.00 1161|1,0 reject_low 20 ALIGNMENT 0 YS2-20a19.q1k vc_7 1062 1063 5172 6360 C 0 0.00 1161 reject_low 20 ALIGNMENT 35 YS2-20a19.q1k vc_5 856 818 5025 5063 C 39 94.87 1161 reject_low 16 ALIGNMENT 0 YS2-20a19.q1k vc_3 816 62 2512 2511 C 755 0.00 1161 reject_low 15 ALIGNMENT 32 YS2-20a19.q1k vc_5 853 818 1 36 C 36 94.44 1161 reject_low 19 ALIGNMENT 36 YS2-20a19.q1k vc_4 817 856 5832 5871 F 40 95.00 1161 reject_low 11 ALIGNMENT 203 YS2-20a19.q1k vc_4 1161 856 5497 5812 C 306 90.20 1161 reject_low 9 ALIGNMENT 1016 YS2-20a20.q1k chr12 1194 41 520197 521359 C 1154 97.23 1209 accept 0 ALIGNMENT 0 YS2-20a22.q1k vc_5 550 62 37 36 C 489 0.00 589 reject_low 6 ALIGNMENT 40 YS2-20a22.q1k vc_4 550 589 5832 5871 F 40 100.00 589 reject_low 3 ALIGNMENT 0 YS2-20a22.q1k vc_1 549 62 2512 2511 C 488 0.00 589 reject_low 1 ALIGNMENT 0 YS2-20a22.q1k vc_7 62 551 13525 13524 F 490 0.00 589 reject_low 5 ALIGNMENT 495 YS2-20a22.q1k chr04 549 37 1112020 1112533 C 513 99.81 589 accept 0 ALIGNMENT 0 YS2-20a22.q1k vc_4 62 549 5832 5831 F 488 0.00 589 reject_low 3 ALIGNMENT 0 YS2-20a22.q1k vc_3 549 62 2512 2511 C 488 0.00 589 reject_low 2 ALIGNMENT 36 YS2-20a22.q1k vc_5 586 551 1 36 C 36 100.00 589 reject_low 6 ALIGNMENT 40 YS2-20a22.q1k vc_3 589 550 2472 2511 C 40 100.00 589 reject_low 2 ALIGNMENT 0 YS2-20a22.q1k chr04 589 550 1112021 1112020 C 40 0.00 589 accept 0 ALIGNMENT 40 YS2-20a22.q1k vc_1 589 550 2472 2511 C 40 100.00 589 reject_low 1 ALIGNMENT 0 YS2-20a22.q1k vc_5 550 62 5064 5063 C 489 0.00 589 reject_low 4 ALIGNMENT 38 YS2-20a22.q1k vc_7 552 589 13525 13562 F 38 100.00 589 reject_low 5 ALIGNMENT 39 YS2-20a22.q1k vc_5 589 551 5025 5063 C 39 100.00 589 reject_low 4 ALIGNMENT 891 YS2-20a23.q1k chr04 57 1077 248309 249328 F 1021 97.06 1126 accept 0 ALIGNMENT 961 YS2-20a23.p1k chr04 1211 33 251054 252242 C 1179 95.17 1213 accept 0 ALIGNMENT 927 YS2-20a24.p1k chr16 35 1087 677247 678297 F 1053 96.77 1297 accept 0 ALIGNMENT 1065 YS2-20b01.p1k chr08 1300 32 129218 130490 C 1269 95.82 1305 accept 0 ALIGNMENT 41 YS2-20b02.q1k vc_4 224 264 5831 5871 F 41 100.00 264 reject_low 4 ALIGNMENT 41 YS2-20b02.q1k vc_2 264 224 2105 2145 C 41 100.00 264 reject_low 2 ALIGNMENT 0 YS2-20b02.q1k vc_5 225 62 5064 5063 C 164 0.00 264 reject_low 5 ALIGNMENT 41 YS2-20b02.q1k vc_3 264 224 2472 2512 C 41 100.00 264 reject_low 3 ALIGNMENT 41 YS2-20b02.q1k vc_1 264 224 2472 2512 C 41 100.00 264 reject_low 1 ALIGNMENT 0 YS2-20b02.q1k vc_7 62 226 13525 13524 F 165 0.00 264 reject_low 6 ALIGNMENT 0 YS2-20b02.q1k vc_2 223 62 2146 2145 C 162 0.00 264 reject_low 2 ALIGNMENT 0 YS2-20b02.q1k chr12 225 264 239429 239428 F 40 0.00 264 accept 0 ALIGNMENT 38 YS2-20b02.q1k vc_7 227 264 13525 13562 F 38 100.00 264 reject_low 6 ALIGNMENT 180 YS2-20b02.q1k chr12 41 224 239246 239429 F 184 100.00 264 accept 0 ALIGNMENT 0 YS2-20b02.q1k vc_3 223 62 2513 2512 C 162 0.00 264 reject_low 3 ALIGNMENT 0 YS2-20b02.q1k vc_5 225 62 37 36 C 164 0.00 264 reject_low 7 ALIGNMENT 0 YS2-20b02.q1k vc_1 223 62 2513 2512 C 162 0.00 264 reject_low 1 ALIGNMENT 39 YS2-20b02.q1k vc_5 264 226 5025 5063 C 39 100.00 264 reject_low 5 ALIGNMENT 0 YS2-20b02.q1k vc_4 62 223 5831 5830 F 162 0.00 264 reject_low 4 ALIGNMENT 36 YS2-20b02.q1k vc_5 261 226 1 36 C 36 100.00 264 reject_low 7 ALIGNMENT 853 YS2-20b03.q1k chr11 1014 41 244197 245186 C 974 96.30 1193 accept 0 ALIGNMENT 1039 YS2-20b03.p1k chr11 39 1308 240707 241989 F 1270 95.20 1336 accept 0 ALIGNMENT 39 YS2-20b04.q1k vc_5 424 386 5025 5063 C 39 100.00 424 reject_low 12 ALIGNMENT 320 YS2-20b04.p1k vc_7 1 547 13918 14464 F 547 87.20 603 reject_vc 7 ALIGNMENT 320 YS2-20b04.p1k vc_7 1 547 456 1002 F 547 87.20 603 reject_vc 6 ALIGNMENT 0 YS2-20b04.q1k vc_4 62 383 5831 5830 F 322 0.00 424 reject_low 11 ALIGNMENT 0 YS2-20b04.q1k vc_7 62 386 13525 13524 F 325 0.00 424 reject_low 14 ALIGNMENT 41 YS2-20b04.q1k vc_2 424 384 2105 2145 C 41 100.00 424 reject_low 9 ALIGNMENT 326 YS2-20b04.p1k vc_1 547 1 1203 1749 C 547 87.57 603 reject_vc 3 ALIGNMENT 0 YS2-20b04.q1k vc_2 383 62 2146 2145 C 322 0.00 424 reject_low 9 ALIGNMENT 329 YS2-20b04.p1k vc_5 547 1 4123 4669 C 547 87.75 603 reject_vc 1 ALIGNMENT 0 YS2-20b04.q1k vc_5 385 62 5064 5063 C 324 0.00 424 reject_low 12 ALIGNMENT 38 YS2-20b04.q1k vc_7 387 424 13525 13562 F 38 100.00 424 reject_low 14 ALIGNMENT 38 YS2-20b04.q1k vc_7 387 424 63 100 F 38 100.00 424 reject_low 13 ALIGNMENT 0 YS2-20b04.q1k vc_7 62 386 63 62 F 325 0.00 424 reject_low 13 ALIGNMENT 41 YS2-20b04.q1k vc_4 384 424 5831 5871 F 41 100.00 424 reject_low 11 ALIGNMENT 36 YS2-20b04.q1k vc_5 421 386 1 36 C 36 100.00 424 reject_low 15 ALIGNMENT 329 YS2-20b04.p1k vc_6 1 547 3712 4258 F 547 87.75 603 reject_vc 2 ALIGNMENT 326 YS2-20b04.p1k vc_2 547 1 1203 1749 C 547 87.57 603 reject_vc 4 ALIGNMENT 41 YS2-20b04.q1k vc_3 424 384 2472 2512 C 41 100.00 424 reject_low 10 ALIGNMENT 0 YS2-20b04.q1k vc_3 383 62 2513 2512 C 322 0.00 424 reject_low 10 ALIGNMENT 41 YS2-20b04.q1k vc_1 424 384 2472 2512 C 41 100.00 424 reject_low 8 ALIGNMENT 326 YS2-20b04.p1k vc_3 547 1 1203 1749 C 547 87.57 603 reject_vc 5 ALIGNMENT 0 YS2-20b04.q1k vc_1 383 62 2513 2512 C 322 0.00 424 reject_low 8 ALIGNMENT 325 YS2-20b04.q1k chr02 40 383 423097 423440 F 344 99.71 424 accept 0 ALIGNMENT 0 YS2-20b04.q1k vc_5 385 62 37 36 C 324 0.00 424 reject_low 15 ALIGNMENT 0 YS2-20b04.q1k chr02 384 424 423440 423439 F 41 0.00 424 accept 0 ALIGNMENT 0 YS2-20b05.q1k vc_4 62 499 5831 5830 F 438 0.00 540 reject_low 4 ALIGNMENT 41 YS2-20b05.q1k vc_1 540 500 2472 2512 C 41 100.00 540 reject_low 2 ALIGNMENT 0 YS2-20b05.q1k vc_5 501 62 5064 5063 C 440 0.00 540 reject_low 5 ALIGNMENT 0 YS2-20b05.q1k vc_5 501 62 37 36 C 440 0.00 540 reject_low 7 ALIGNMENT 688 YS2-20b05.p1k chr09 8 845 241306 242139 F 838 94.39 1262 accept_chi 0 ALIGNMENT 0 YS2-20b05.q1k vc_1 499 62 2513 2512 C 438 0.00 540 reject_low 2 ALIGNMENT 0 YS2-20b05.q1k vc_7 62 502 13525 13524 F 441 0.00 540 reject_low 6 ALIGNMENT 39 YS2-20b05.q1k vc_5 540 502 5025 5063 C 39 100.00 540 reject_low 5 ALIGNMENT 0 YS2-20b05.q1k chr14 540 500 269311 269310 C 41 0.00 540 accept_chi 1 ALIGNMENT 36 YS2-20b05.q1k vc_5 537 502 1 36 C 36 100.00 540 reject_low 7 ALIGNMENT 41 YS2-20b05.q1k vc_3 540 500 2472 2512 C 41 100.00 540 reject_low 3 ALIGNMENT 0 YS2-20b05.q1k vc_3 499 62 2513 2512 C 438 0.00 540 reject_low 3 ALIGNMENT 41 YS2-20b05.q1k vc_4 500 540 5831 5871 F 41 100.00 540 reject_low 4 ALIGNMENT 459 YS2-20b05.q1k chr14 499 29 269310 269779 C 471 99.79 540 accept_chi 1 ALIGNMENT 38 YS2-20b05.q1k vc_7 503 540 13525 13562 F 38 100.00 540 reject_low 6 ALIGNMENT 998 YS2-20b06.p1k chr12 1288 35 458721 459996 C 1254 94.74 1337 accept 0 ALIGNMENT 1001 YS2-20b06.q1k chr12 42 1159 454633 455757 F 1118 96.96 1204 accept 0 ALIGNMENT 119 YS2-20b06.p1k chr12 348 230 485696 485814 C 119 100.00 1337 reject_low 6 ALIGNMENT 94 YS2-20b06.p1k chr06 608 715 31622 31729 F 108 98.15 1337 reject_low 3 ALIGNMENT 0 YS2-20b06.p1k chr12 885 349 485697 485696 C 537 0.00 1337 reject_low 6 ALIGNMENT 119 YS2-20b06.p1k chr12 348 230 482044 482162 C 119 100.00 1337 reject_low 5 ALIGNMENT 0 YS2-20b06.p1k chr12 214 62 489482 489481 C 153 0.00 1337 reject_low 2 ALIGNMENT 0 YS2-20b06.p1k chr12 229 62 468931 468930 C 168 0.00 1337 reject_low 1 ALIGNMENT 0 YS2-20b06.p1k chr12 229 62 472583 472582 C 168 0.00 1337 reject_low 4 ALIGNMENT 0 YS2-20b06.p1k chr12 885 349 489349 489348 C 537 0.00 1337 reject_low 2 ALIGNMENT 128 YS2-20b06.p1k chr12 348 215 489348 489481 C 134 98.51 1337 reject_low 2 ALIGNMENT 0 YS2-20b06.p1k chr12 885 349 472465 472464 C 537 0.00 1337 reject_low 4 ALIGNMENT 0 YS2-20b06.p1k chr06 716 885 31729 31728 F 170 0.00 1337 reject_low 3 ALIGNMENT 119 YS2-20b06.p1k chr12 348 230 472464 472582 C 119 100.00 1337 reject_low 4 ALIGNMENT 852 YS2-20b06.p1k chr12 1288 230 467858 468930 C 1059 94.90 1337 reject_low 1 ALIGNMENT 0 YS2-20b06.p1k chr12 885 349 482045 482044 C 537 0.00 1337 reject_low 5 ALIGNMENT 0 YS2-20b06.p1k chr12 229 62 482163 482162 C 168 0.00 1337 reject_low 5 ALIGNMENT 0 YS2-20b06.p1k chr12 229 62 485815 485814 C 168 0.00 1337 reject_low 6 ALIGNMENT 1001 YS2-20b06.q1k chr12 42 1159 463770 464894 F 1118 96.96 1204 reject_low 1 ALIGNMENT 0 YS2-20b06.p1k chr06 62 607 31622 31621 F 546 0.00 1337 reject_low 3 ALIGNMENT 0 YS2-20b07.q1k vc_1 173 62 2513 2512 C 112 0.00 214 reject_low 1 ALIGNMENT 41 YS2-20b07.q1k vc_4 174 214 5831 5871 F 41 100.00 214 reject_low 3 ALIGNMENT 0 YS2-20b07.q1k chr07 214 175 976172 976171 C 40 0.00 214 accept 0 ALIGNMENT 36 YS2-20b07.q1k vc_5 211 176 1 36 C 36 100.00 214 reject_low 6 ALIGNMENT 41 YS2-20b07.q1k vc_3 214 174 2472 2512 C 41 100.00 214 reject_low 2 ALIGNMENT 0 YS2-20b07.q1k vc_5 175 62 5064 5063 C 114 0.00 214 reject_low 4 ALIGNMENT 0 YS2-20b07.q1k vc_5 175 62 37 36 C 114 0.00 214 reject_low 6 ALIGNMENT 39 YS2-20b07.q1k vc_5 214 176 5025 5063 C 39 100.00 214 reject_low 4 ALIGNMENT 0 YS2-20b07.q1k vc_3 173 62 2513 2512 C 112 0.00 214 reject_low 2 ALIGNMENT 130 YS2-20b07.q1k chr07 174 38 976171 976307 C 137 98.54 214 accept 0 ALIGNMENT 0 YS2-20b07.q1k vc_4 62 173 5831 5830 F 112 0.00 214 reject_low 3 ALIGNMENT 0 YS2-20b07.q1k vc_7 62 176 13525 13524 F 115 0.00 214 reject_low 5 ALIGNMENT 41 YS2-20b07.q1k vc_1 214 174 2472 2512 C 41 100.00 214 reject_low 1 ALIGNMENT 38 YS2-20b07.q1k vc_7 177 214 13525 13562 F 38 100.00 214 reject_low 5 ALIGNMENT 0 YS2-20b09.p1k chrm 62 193 4386 4385 F 132 0.00 1337 ambiguous 2 ALIGNMENT 1011 YS2-20b09.q1k chr11 1171 34 643445 644582 C 1138 97.63 1197 accept_chi 0 ALIGNMENT 0 YS2-20b09.p1k chrm 209 933 56921 56920 F 725 0.00 1337 reject_low 5 ALIGNMENT 0 YS2-20b09.p1k chrm 933 179 44869 44868 C 755 0.00 1337 reject_low 4 ALIGNMENT 79 YS2-20b09.p1k chrm 37 208 56748 56921 F 172 84.88 1337 reject_low 5 ALIGNMENT 0 YS2-20b09.p1k chrm 933 185 30156 30155 C 749 0.00 1337 reject_low 3 ALIGNMENT 401 YS2-20b09.p1k chrm 194 1137 4386 5348 F 944 89.41 1337 ambiguous 2 ALIGNMENT 104 YS2-20b09.p1k chrm 184 37 30155 30303 C 148 91.89 1337 reject_low 3 ALIGNMENT 93 YS2-20b09.p1k chrm 178 62 44868 44984 C 117 94.02 1337 reject_low 4 ALIGNMENT 562 YS2-20b09.p1k chrm 32 1229 4223 5444 F 1198 89.90 1337 ambiguous 1 ALIGNMENT 0 YS2-20b10.q1k vc_5 207 62 37 36 C 146 0.00 246 reject_low 14 ALIGNMENT 370 YS2-20b10.p1k vc_7 1 674 456 1119 F 674 86.65 782 reject_vc 5 ALIGNMENT 39 YS2-20b10.q1k vc_5 246 208 5025 5063 C 39 100.00 246 reject_low 11 ALIGNMENT 38 YS2-20b10.q1k vc_7 209 246 13525 13562 F 38 100.00 246 reject_low 13 ALIGNMENT 0 YS2-20b10.q1k vc_7 62 208 63 62 F 147 0.00 246 reject_low 12 ALIGNMENT 0 YS2-20b10.q1k vc_7 62 208 13525 13524 F 147 0.00 246 reject_low 13 ALIGNMENT 379 YS2-20b10.p1k vc_6 1 615 3712 4318 F 615 88.62 782 reject_vc 7 ALIGNMENT 376 YS2-20b10.p1k vc_2 674 1 1086 1749 C 674 86.80 782 reject_vc 3 ALIGNMENT 0 YS2-20b10.q1k vc_4 62 205 5831 5830 F 144 0.00 246 reject_low 10 ALIGNMENT 370 YS2-20b10.p1k vc_7 1 674 13918 14581 F 674 86.65 782 reject_vc 6 ALIGNMENT 376 YS2-20b10.p1k vc_1 674 1 1086 1749 C 674 86.80 782 reject_vc 2 ALIGNMENT 0 YS2-20b10.q1k vc_5 207 62 5064 5063 C 146 0.00 246 reject_low 11 ALIGNMENT 162 YS2-20b10.q1k chr04 205 39 857855 858021 C 167 100.00 246 accept 0 ALIGNMENT 376 YS2-20b10.p1k vc_3 674 1 1086 1749 C 674 86.80 782 reject_vc 4 ALIGNMENT 41 YS2-20b10.q1k vc_4 206 246 5831 5871 F 41 100.00 246 reject_low 10 ALIGNMENT 41 YS2-20b10.q1k vc_1 246 206 2472 2512 C 41 100.00 246 reject_low 8 ALIGNMENT 41 YS2-20b10.q1k vc_3 246 206 2472 2512 C 41 100.00 246 reject_low 9 ALIGNMENT 36 YS2-20b10.q1k vc_5 243 208 1 36 C 36 100.00 246 reject_low 14 ALIGNMENT 0 YS2-20b10.q1k vc_1 205 62 2513 2512 C 144 0.00 246 reject_low 8 ALIGNMENT 38 YS2-20b10.q1k vc_7 209 246 63 100 F 38 100.00 246 reject_low 12 ALIGNMENT 0 YS2-20b10.q1k vc_3 205 62 2513 2512 C 144 0.00 246 reject_low 9 ALIGNMENT 0 YS2-20b10.q1k chr04 246 206 857856 857855 C 41 0.00 246 accept 0 ALIGNMENT 379 YS2-20b10.p1k vc_5 674 1 4006 4669 C 674 86.94 782 reject_vc 1 ALIGNMENT 899 YS2-20b11.p1k chr13 1109 33 299927 301009 C 1077 96.10 1313 accept 0 ALIGNMENT 938 YS2-20b11.q1k chr13 39 1112 299926 301009 F 1074 97.49 1239 accept 0 ALIGNMENT 38 YS2-20b12.q1k vc_7 308 345 13525 13562 F 38 100.00 345 reject_low 7 ALIGNMENT 253 YS2-20b12.q1k chr12 30 306 459026 459302 F 277 98.92 345 accept 0 ALIGNMENT 40 YS2-20b12.q1k vc_1 345 306 2472 2511 C 40 100.00 345 reject_low 3 ALIGNMENT 0 YS2-20b12.q1k vc_7 62 307 13525 13524 F 246 0.00 345 reject_low 7 ALIGNMENT 36 YS2-20b12.q1k vc_5 342 307 1 36 C 36 100.00 345 reject_low 8 ALIGNMENT 39 YS2-20b12.q1k vc_5 345 307 5025 5063 C 39 100.00 345 reject_low 6 ALIGNMENT 40 YS2-20b12.q1k vc_3 345 306 2472 2511 C 40 100.00 345 reject_low 4 ALIGNMENT 250 YS2-20b12.p1k chr12 305 31 459026 459300 C 275 98.91 324 reject_low 2 ALIGNMENT 0 YS2-20b12.q1k vc_4 62 305 5832 5831 F 244 0.00 345 reject_low 5 ALIGNMENT 0 YS2-20b12.q1k vc_1 305 62 2512 2511 C 244 0.00 345 reject_low 3 ALIGNMENT 253 YS2-20b12.q1k chr12 30 306 468163 468439 F 277 98.92 345 reject_low 1 ALIGNMENT 250 YS2-20b12.p1k chr12 305 31 468163 468437 C 275 98.91 324 accept 0 ALIGNMENT 0 YS2-20b12.q1k chr12 307 345 468439 468438 F 39 0.00 345 reject_low 1 ALIGNMENT 0 YS2-20b12.p1k chr12 324 306 468164 468163 C 19 0.00 324 accept 0 ALIGNMENT 0 YS2-20b12.p1k chr12 324 306 459027 459026 C 19 0.00 324 reject_low 2 ALIGNMENT 0 YS2-20b12.q1k chr12 307 345 459302 459301 F 39 0.00 345 accept 0 ALIGNMENT 40 YS2-20b12.q1k vc_4 306 345 5832 5871 F 40 100.00 345 reject_low 5 ALIGNMENT 0 YS2-20b12.q1k vc_5 306 62 5064 5063 C 245 0.00 345 reject_low 6 ALIGNMENT 0 YS2-20b12.q1k vc_3 305 62 2512 2511 C 244 0.00 345 reject_low 4 ALIGNMENT 0 YS2-20b12.q1k vc_5 306 62 37 36 C 245 0.00 345 reject_low 8 ALIGNMENT 211 YS2-20b13.q1k vc_1 1 293 2689 2985 F 293 91.13 338 reject_vc 3 ALIGNMENT 0 YS2-20b13.q1k vc_7 53 54 5172 6360 C 0 0.00 338 reject_low 6 ALIGNMENT 213 YS2-20b13.q1k vc_5 1 338 2556 2900 F 338 88.46 338 reject_vc 0 ALIGNMENT 206 YS2-20b13.q1k vc_4 338 1 5308 5654 C 338 87.57 338 reject_vc 2 ALIGNMENT 213 YS2-20b13.q1k vc_7 338 1 2225 2569 C 338 88.17 338 reject_vc 1 ALIGNMENT 211 YS2-20b13.q1k vc_3 1 293 2689 2985 F 293 91.13 338 reject_vc 5 ALIGNMENT 211 YS2-20b13.q1k vc_2 1 293 2322 2618 F 293 91.13 338 reject_vc 4 ALIGNMENT 155 YS2-20b13.q1k vc_7 293 53 4928 5172 C 241 88.38 338|0,1 reject_low 6 ALIGNMENT 51 YS2-20b13.q1k vc_7 54 3 6360 6411 C 52 100.00 338|1,0 reject_low 6 ALIGNMENT 0 YS2-20b14.p1k chrm 377 62 53884 53883 C 316 0.00 1423 reject_low 10 ALIGNMENT 0 YS2-20b14.q1k chrm 452 62 11089 11088 C 391 0.00 1241 reject_low 51,52 ALIGNMENT 0 YS2-20b14.p1k chrm 369 137 50177 52761 C 233 0.00 1423 reject_low 50 ALIGNMENT 0 YS2-20b14.q1k chrm 877 277 10946 10945 C 601 0.00 1241 reject_low 1 ALIGNMENT 30 YS2-20b14.q1k chrm 904 791 34885 34993 C 114 81.58 1241 reject_low 8 ALIGNMENT 27 YS2-20b14.p1k chrm 434 393 11047 11088 C 42 90.48 1423 reject_low 7 ALIGNMENT 0 YS2-20b14.p1k chrm 346 62 8325 8324 C 285 0.00 1423 reject_low 4 ALIGNMENT 0 YS2-20b14.q1k chrm 451 180 52815 53822 C 272 0.00 1241 reject_low 42 ALIGNMENT 47 YS2-20b14.p1k chrm 147 82 81381 81447 C 66 90.91 1423 reject_low 46 ALIGNMENT 43 YS2-20b14.q1k chrm 873 781 34262 34353 C 93 86.02 1241 reject_low 37 ALIGNMENT 0 YS2-20b14.p1k chrm 388 62 83100 83099 C 327 0.00 1423 reject_low 31 ALIGNMENT 32 YS2-20b14.p1k chrm 449 370 50094 50176 C 80 82.50 1423 reject_low 39,50 ALIGNMENT 0 YS2-20b14.q1k chrm 877 850 3060 3059 C 28 0.00 1241 reject_low 53,54 ALIGNMENT 0 YS2-20b14.q1k chrm 877 186 52763 52762 C 692 0.00 1241 reject_low 22 ALIGNMENT 0 YS2-20b14.p1k chrm 62 80 2749 2748 F 19 0.00 1423 reject_low 51 ALIGNMENT 0 YS2-20b14.p1k chrm 62 390 71212 71211 F 329 0.00 1423 reject_low 5 ALIGNMENT 23 YS2-20b14.q1k chrm 276 245 10945 10976 C 32 100.00 1241 reject_low 1 ALIGNMENT 0 YS2-20b14.q1k chrm 877 849 77673 77672 C 29 0.00 1241 reject_low 18 ALIGNMENT 38 YS2-20b14.q1k chrm 496 452 76593 76637 C 45 97.78 1241 reject_low 44 ALIGNMENT 36 YS2-20b14.p1k chrm 391 452 71212 71272 F 62 87.10 1423 reject_low 5 ALIGNMENT 0 YS2-20b14.p1k chrm 392 126 3102 10393 C 267 0.00 1423 reject_low 38 ALIGNMENT 50 YS2-20b14.p1k chrm 130 45 9027 9108 C 86 89.53 1423 reject_low 34 ALIGNMENT 0 YS2-20b14.q1k chrm 62 451 52331 52330 F 390 0.00 1241 reject_low 6 ALIGNMENT 0 YS2-20b14.q1k chrm 100 62 35008 35007 C 39 0.00 1241 reject_low 37 ALIGNMENT 0 YS2-20b14.q1k chrm 452 62 34977 34976 C 391 0.00 1241 reject_low 17 ALIGNMENT 59 YS2-20b14.q1k chrm 195 124 76573 76645 C 72 94.44 1241 reject_low 2,5 ALIGNMENT 40 YS2-20b14.q1k chrm 494 438 3060 3117 C 57 91.23 1241 reject_low 32,33 ALIGNMENT 0 YS2-20b14.q1k chrm 786 497 10809 11044 C 290 0.00 1241 reject_low 51,52 ALIGNMENT 0 YS2-20b14.p1k chrm 62 78 71209 71208 F 17 0.00 1423 reject_low 2 ALIGNMENT 0 YS2-20b14.p1k chrm 396 126 66828 66827 C 271 0.00 1423 reject_low 11 ALIGNMENT 56 YS2-20b14.q1k chrm 101 185 2716 2804 F 85 90.59 1241 reject_low 3,4,7,34,35,36,38 ALIGNMENT 0 YS2-20b14.p1k chrm 81 62 83098 83097 C 20 0.00 1423 reject_low 48 ALIGNMENT 0 YS2-20b14.q1k chrm 877 175 10395 10394 C 703 0.00 1241 reject_low 26 ALIGNMENT 0 YS2-20b14.q1k chrm 877 849 76596 76595 C 29 0.00 1241 reject_low 43 ALIGNMENT 42 YS2-20b14.q1k chrm 452 511 52331 52390 F 60 91.67 1241 reject_low 6 ALIGNMENT 0 YS2-20b14.q1k chrm 132 62 10435 10434 C 71 0.00 1241 reject_low 26 ALIGNMENT 0 YS2-20b14.q1k chrm 780 184 34354 34925 C 597 0.00 1241 reject_low 37 ALIGNMENT 0 YS2-20b14.p1k chrm 382 62 69106 69105 C 321 0.00 1423 reject_low 30 ALIGNMENT 0 YS2-20b14.q1k chrm 451 186 76638 77660 C 266 0.00 1241 reject_low 44 ALIGNMENT 32 YS2-20b14.p1k chrm 433 378 53828 53883 C 56 85.71 1423 reject_low 10 ALIGNMENT 39 YS2-20b14.q1k chrm 494 436 10394 10451 C 59 89.83 1241 reject_low 53 ALIGNMENT 0 YS2-20b14.p1k chrm 83 62 66869 66868 C 22 0.00 1423 reject_low 11 ALIGNMENT 85 YS2-20b14.p1k chrm 435 961 9862 10381 F 527 79.89 1423 reject_bad_break 0 ALIGNMENT 0 YS2-20b14.p1k chrm 62 388 81 80 F 327 0.00 1423 reject_low 33 ALIGNMENT 0 YS2-20b14.q1k chrm 451 177 8279 10743 C 275 0.00 1241 reject_low 54 ALIGNMENT 0 YS2-20b14.q1k chrm 877 196 76574 76573 C 682 0.00 1241 reject_low 2,5 ALIGNMENT 0 YS2-20b14.p1k chrm 392 131 3102 9026 C 262 0.00 1423 reject_low 34 ALIGNMENT 0 YS2-20b14.q1k chrm 877 860 53817 53816 C 18 0.00 1241 reject_low 14 ALIGNMENT 0 YS2-20b14.q1k chrm 877 849 10747 10746 C 29 0.00 1241 reject_low 51,52 ALIGNMENT 31 YS2-20b14.p1k chrm 460 345 9002 9123 C 116 80.17 1423 reject_low 3 ALIGNMENT 33 YS2-20b14.p1k chrm 434 370 34287 34352 C 65 86.15 1423 reject_low 28 ALIGNMENT 0 YS2-20b14.q1k chrm 808 497 3100 8233 C 312 0.00 1241 reject_low 54 ALIGNMENT 0 YS2-20b14.p1k chrm 78 62 50158 50157 C 17 0.00 1423 reject_low 47 ALIGNMENT 0 YS2-20b14.q1k chrm 877 179 34284 34283 C 699 0.00 1241 reject_low 23 ALIGNMENT 0 YS2-20b14.q1k chrm 877 495 52773 52772 C 383 0.00 1241 reject_low 42 ALIGNMENT 0 YS2-20b14.q1k chrm 132 62 77714 77713 C 71 0.00 1241 reject_low 44 ALIGNMENT 38 YS2-20b14.p1k chrm 125 79 10394 10439 C 47 97.87 1423 reject_low 38 ALIGNMENT 31 YS2-20b14.p1k chrm 434 386 76595 76644 C 49 89.80 1423 reject_low 49 ALIGNMENT 63 YS2-20b14.p1k chrm 149 68 8212 8293 C 82 92.68 1423 reject_low 35 ALIGNMENT 0 YS2-20b14.p1k chrm 390 62 84532 84531 C 329 0.00 1423 reject_low 21 ALIGNMENT 58 YS2-20b14.p1k chrm 136 75 76584 76645 C 62 98.39 1423 reject_low 41 ALIGNMENT 0 YS2-20b14.q1k chrm 62 451 2751 2750 F 390 0.00 1241 reject_low 15 ALIGNMENT 0 YS2-20b14.q1k chrm 497 877 2795 2794 F 381 0.00 1241 reject_low 15 ALIGNMENT 55 YS2-20b14.p1k chrm 81 136 2749 2804 F 56 100.00 1423 reject_low 51 ALIGNMENT 0 YS2-20b14.p1k chrm 132 376 133 9472 F 245 0.00 1423 reject_low 52 ALIGNMENT 45 YS2-20b14.p1k chrm 130 42 53823 53908 C 89 86.52 1423 reject_low 39 ALIGNMENT 0 YS2-20b14.q1k chrm 877 497 76594 76593 C 381 0.00 1241 reject_low 44 ALIGNMENT 0 YS2-20b14.q1k chrm 808 62 11087 11086 C 747 0.00 1241 reject_low 25 ALIGNMENT 0 YS2-20b14.p1k chrm 378 195 81459 84417 C 184 0.00 1423 reject_low 20 ALIGNMENT 0 YS2-20b14.q1k chrm 790 62 34994 34993 C 729 0.00 1241 reject_low 8 ALIGNMENT 41 YS2-20b14.q1k chrm 185 133 52762 52813 C 53 94.34 1241 reject_low 22 ALIGNMENT 37 YS2-20b14.q1k chrm 176 133 10744 10787 C 44 97.73 1241 reject_low 53,54 ALIGNMENT 48 YS2-20b14.p1k chrm 194 79 84418 84534 C 116 83.62 1423 reject_low 20 ALIGNMENT 0 YS2-20b14.p1k chrm 78 62 84535 84534 C 17 0.00 1423 reject_low 20 ALIGNMENT 0 YS2-20b14.p1k chrm 83 62 46357 46356 C 22 0.00 1423 reject_low 29 ALIGNMENT 0 YS2-20b14.p1k chrm 146 396 71275 71274 F 251 0.00 1423 reject_low 2 ALIGNMENT 0 YS2-20b14.q1k chrm 787 62 53886 53885 C 726 0.00 1241 reject_low 14 ALIGNMENT 0 YS2-20b14.p1k chrm 81 62 81448 81447 C 20 0.00 1423 reject_low 46 ALIGNMENT 0 YS2-20b14.p1k chrm 333 134 2194 3050 C 200 0.00 1423 reject_low 45 ALIGNMENT 51 YS2-20b14.p1k chrm 133 71 80494 80557 C 63 95.24 1423 reject_low 49 ALIGNMENT 0 YS2-20b14.q1k chrm 451 62 34330 34329 C 390 0.00 1241 reject_low 16 ALIGNMENT 0 YS2-20b14.p1k chrm 378 132 81459 83047 C 247 0.00 1423 reject_low 48 ALIGNMENT 0 YS2-20b14.p1k chrm 369 62 34353 34352 C 308 0.00 1423 reject_low 28 ALIGNMENT 0 YS2-20b14.p1k chrm 83 62 2137 2136 C 22 0.00 1423 reject_low 27 ALIGNMENT 0 YS2-20b14.p1k chrm 369 131 50177 53822 C 239 0.00 1423 reject_low 39 ALIGNMENT 34 YS2-20b14.q1k chrm 848 784 77672 77734 C 65 86.15 1241 reject_low 18 ALIGNMENT 0 YS2-20b14.p1k chrm 81 62 52816 52815 C 20 0.00 1423 reject_low 50 ALIGNMENT 0 YS2-20b14.p1k chrm 396 130 34284 34283 C 267 0.00 1423 reject_low 24 ALIGNMENT 32 YS2-20b14.q1k chrm 174 133 10394 10434 C 42 97.62 1241 reject_low 26 ALIGNMENT 0 YS2-20b14.q1k chrm 808 495 3100 10393 C 314 0.00 1241 reject_low 53 ALIGNMENT 0 YS2-20b14.q1k chrm 132 62 52814 52813 C 71 0.00 1241 reject_low 22 ALIGNMENT 33 YS2-20b14.q1k chrm 849 809 3059 3099 C 41 97.56 1241 reject_low 53,54 ALIGNMENT 31 YS2-20b14.q1k chrm 494 452 52772 52814 C 43 95.35 1241 reject_low 42 ALIGNMENT 0 YS2-20b14.q1k chrm 877 494 53829 53828 C 384 0.00 1241 reject_low 19 ALIGNMENT 0 YS2-20b14.q1k chrm 62 100 2716 2715 F 39 0.00 1241 reject_low 3,4,7,34,35,36,38 ALIGNMENT 58 YS2-20b14.p1k chrm 79 145 71209 71275 F 67 95.52 1423 reject_low 2 ALIGNMENT 29 YS2-20b14.p1k chrm 453 334 2075 2193 C 120 80.83 1423 reject_low 45 ALIGNMENT 45 YS2-20b14.p1k chrm 82 131 83 132 F 50 98.00 1423 reject_low 52 ALIGNMENT 33 YS2-20b14.p1k chrm 434 383 69054 69105 C 52 88.46 1423 reject_low 30 ALIGNMENT 0 YS2-20b14.p1k chrm 137 376 2805 9472 F 240 0.00 1423 reject_low 51 ALIGNMENT 41 YS2-20b14.q1k chrm 848 787 10746 10808 C 62 88.71 1241 reject_low 51,52 ALIGNMENT 0 YS2-20b14.q1k chrm 186 877 2804 2803 F 692 0.00 1241 reject_low 3,4,7,34,35,36,38 ALIGNMENT 38 YS2-20b14.q1k chrm 496 452 34285 34329 C 45 97.78 1241 reject_low 16 ALIGNMENT 0 YS2-20b14.q1k chrm 437 190 3118 8220 C 248 0.00 1241 reject_low 32,33 ALIGNMENT 0 YS2-20b14.p1k chrm 392 133 66869 69046 C 260 0.00 1423 reject_low 40 ALIGNMENT 33 YS2-20b14.q1k chrm 493 452 53828 53869 C 42 97.62 1241 reject_low 19 ALIGNMENT 0 YS2-20b14.q1k chrm 849 877 2793 2792 F 29 0.00 1241 reject_low 9 ALIGNMENT 43 YS2-20b14.p1k chrm 131 84 46309 46356 C 48 97.92 1423 reject_low 29 ALIGNMENT 0 YS2-20b14.q1k chrm 783 62 77735 77734 C 722 0.00 1241 reject_low 18 ALIGNMENT 57 YS2-20b14.p1k chrm 138 79 50098 50157 C 60 98.33 1423 reject_low 47 ALIGNMENT 0 YS2-20b14.q1k chrm 877 497 34934 34933 C 381 0.00 1241 reject_low 17 ALIGNMENT 37 YS2-20b14.q1k chrm 848 792 76595 76652 C 57 89.47 1241 reject_low 43 ALIGNMENT 37 YS2-20b14.q1k chrm 496 453 11045 11088 C 44 97.73 1241 reject_low 51,52 ALIGNMENT 0 YS2-20b14.p1k chrm 392 149 3102 11024 C 244 0.00 1423 reject_low 36 ALIGNMENT 32 YS2-20b14.q1k chrm 848 809 11047 11086 C 40 97.50 1241 reject_low 25 ALIGNMENT 36 YS2-20b14.p1k chrm 446 393 3048 3101 C 54 88.89 1423 reject_low 34,35,36,38 ALIGNMENT 53 YS2-20b14.q1k chrm 183 101 34926 35007 C 83 89.16 1241 reject_low 37 ALIGNMENT 0 YS2-20b14.p1k chrm 350 148 80586 81380 C 203 0.00 1423 reject_low 46 ALIGNMENT 0 YS2-20b14.q1k chrm 116 62 53886 53885 C 55 0.00 1241 reject_low 42 ALIGNMENT 53 YS2-20b14.q1k chrm 189 79 8221 8326 C 111 87.39 1241 reject_low 32,33 ALIGNMENT 38 YS2-20b14.q1k chrm 185 133 77661 77713 C 53 90.57 1241 reject_low 44 ALIGNMENT 0 YS2-20b14.q1k chrm 62 132 52332 52331 F 71 0.00 1241 reject_low 10,11,40,41 ALIGNMENT 41 YS2-20b14.p1k chrm 133 84 3051 3101 C 50 96.00 1423 reject_low 45 ALIGNMENT 47 YS2-20b14.q1k chrm 192 132 3040 3102 C 61 93.44 1241 reject_low 13 ALIGNMENT 37 YS2-20b14.p1k chrm 377 446 9473 9544 F 70 85.71 1423 reject_low 51,52 ALIGNMENT 0 YS2-20b14.q1k chrm 62 767 2714 2713 F 706 0.00 1241 reject_low 9 ALIGNMENT 0 YS2-20b14.p1k chrm 83 62 3102 3101 C 22 0.00 1423 reject_low 45 ALIGNMENT 39 YS2-20b14.p1k chrm 450 379 81388 81458 C 72 86.11 1423 reject_low 20,48 ALIGNMENT 31 YS2-20b14.p1k chrm 434 389 83054 83099 C 46 91.30 1423 reject_low 31 ALIGNMENT 0 YS2-20b14.p1k chrm 396 136 2086 2085 C 261 0.00 1423 reject_low 27 ALIGNMENT 41 YS2-20b14.q1k chrm 795 871 52321 52396 F 77 85.71 1241 reject_low 12 ALIGNMENT 667 YS2-20b14.q1k chrm 1131 41 10105 11180 C 1091 94.32 1241 reject_bad_break 0 ALIGNMENT 0 YS2-20b14.p1k chrm 78 62 10440 10439 C 17 0.00 1423 reject_low 38 ALIGNMENT 38 YS2-20b14.q1k chrm 496 452 8234 8278 C 45 97.78 1241 reject_low 54 ALIGNMENT 0 YS2-20b14.p1k chrm 396 132 46310 46309 C 265 0.00 1423 reject_low 29 ALIGNMENT 0 YS2-20b14.q1k chrm 877 495 3061 3060 C 383 0.00 1241 reject_low 32,33 ALIGNMENT 38 YS2-20b14.q1k chrm 452 496 2751 2795 F 45 97.78 1241 reject_low 15 ALIGNMENT 45 YS2-20b14.q1k chrm 133 190 52332 52390 F 58 93.10 1241 reject_low 10,11,40,41 ALIGNMENT 43 YS2-20b14.p1k chrm 136 82 52762 52815 C 55 94.55 1423 reject_low 50 ALIGNMENT 0 YS2-20b14.q1k chrm 877 497 34286 34285 C 381 0.00 1241 reject_low 16 ALIGNMENT 0 YS2-20b14.q1k chrm 78 62 8327 8326 C 17 0.00 1241 reject_low 32,33 ALIGNMENT 0 YS2-20b14.q1k chrm 132 62 34329 34328 C 71 0.00 1241 reject_low 23 ALIGNMENT 0 YS2-20b14.q1k chrm 791 496 76653 77670 C 296 0.00 1241 reject_low 43 ALIGNMENT 65 YS2-20b14.p1k chrm 70 147 9476 9553 F 78 96.15 1423 reject_bad_break 0 ALIGNMENT 34 YS2-20b14.p1k chrm 434 351 80503 80585 C 84 83.33 1423 reject_low 46 ALIGNMENT 0 YS2-20b14.p1k chrm 148 434 9554 9861 F 287 0.00 1423 reject_bad_break 0 ALIGNMENT 0 YS2-20b14.q1k chrm 512 877 52390 52389 F 366 0.00 1241 reject_low 6 ALIGNMENT 58 YS2-20b14.p1k chrm 148 74 11025 11098 C 75 93.33 1423 reject_low 36 ALIGNMENT 0 YS2-20b14.q1k chrm 877 849 11048 11047 C 29 0.00 1241 reject_low 25 ALIGNMENT 37 YS2-20b14.q1k chrm 496 453 34933 34976 C 44 97.73 1241 reject_low 17 ALIGNMENT 0 YS2-20b14.p1k chrm 62 358 2720 2719 F 297 0.00 1423 reject_low 32 ALIGNMENT 0 YS2-20b14.p1k chrm 345 139 46404 50097 C 207 0.00 1423 reject_low 47 ALIGNMENT 0 YS2-20b14.q1k chrm 132 62 10788 10787 C 71 0.00 1241 reject_low 53,54 ALIGNMENT 0 YS2-20b14.p1k chrm 392 62 11089 11088 C 331 0.00 1423 reject_low 7 ALIGNMENT 0 YS2-20b14.p1k chrm 62 81 83 82 F 20 0.00 1423 reject_low 52 ALIGNMENT 0 YS2-20b14.p1k chrm 392 150 3102 8211 C 243 0.00 1423 reject_low 35 ALIGNMENT 0 YS2-20b14.q1k chrm 451 62 77715 77714 C 390 0.00 1241 reject_low 43 ALIGNMENT 37 YS2-20b14.q1k chrm 495 452 77671 77714 C 44 97.73 1241 reject_low 43 ALIGNMENT 34 YS2-20b14.p1k chrm 439 393 66822 66868 C 47 91.49 1423 reject_low 40,41 ALIGNMENT 0 YS2-20b14.q1k chrm 244 62 10977 10976 C 183 0.00 1241 reject_low 1 ALIGNMENT 0 YS2-20b14.q1k chrm 435 177 10452 10743 C 259 0.00 1241 reject_low 53 ALIGNMENT 45 YS2-20b14.q1k chrm 179 117 53823 53885 C 63 92.06 1241 reject_low 42 ALIGNMENT 0 YS2-20b14.q1k chrm 877 193 3041 3040 C 685 0.00 1241 reject_low 13 ALIGNMENT 37 YS2-20b14.p1k chrm 125 84 66827 66868 C 42 100.00 1423 reject_low 11 ALIGNMENT 0 YS2-20b14.p1k chrm 392 137 66869 76583 C 256 0.00 1423 reject_low 41 ALIGNMENT 45 YS2-20b14.p1k chrm 135 84 2085 2136 C 52 96.15 1423 reject_low 27 ALIGNMENT 31 YS2-20b14.p1k chrm 451 347 8217 8324 C 105 80.00 1423 reject_low 4 ALIGNMENT 53 YS2-20b14.p1k chrm 132 62 69047 69116 C 71 92.96 1423 reject_low 40 ALIGNMENT 43 YS2-20b14.q1k chrm 178 133 34283 34328 C 46 100.00 1241 reject_low 23 ALIGNMENT 48 YS2-20b14.p1k chrm 131 82 83048 83097 C 50 100.00 1423 reject_low 48 ALIGNMENT 0 YS2-20b14.q1k chrm 62 794 52321 52320 F 733 0.00 1241 reject_low 12 ALIGNMENT 0 YS2-20b14.q1k chrm 191 877 52390 52389 F 687 0.00 1241 reject_low 10,11,40,41 ALIGNMENT 34 YS2-20b14.q1k chrm 768 848 2714 2793 F 81 82.72 1241 reject_low 9 ALIGNMENT 0 YS2-20b14.q1k chrm 451 62 53870 53869 C 390 0.00 1241 reject_low 19 ALIGNMENT 51 YS2-20b14.p1k chrm 129 70 34283 34342 C 60 96.67 1423 reject_low 24 ALIGNMENT 0 YS2-20b14.q1k chrm 123 62 76646 76645 C 62 0.00 1241 reject_low 2,5 ALIGNMENT 41 YS2-20b14.q1k chrm 859 788 53816 53885 C 72 87.50 1241 reject_low 14 ALIGNMENT 0 YS2-20b14.q1k chrm 131 62 3103 3102 C 70 0.00 1241 reject_low 13 ALIGNMENT 0 YS2-20b14.p1k chrm 385 134 76645 80493 C 252 0.00 1423 reject_low 49 ALIGNMENT 29 YS2-20b14.p1k chrm 389 423 81 115 F 35 97.14 1423 reject_low 33 ALIGNMENT 0 YS2-20b14.p1k chrm 344 62 9124 9123 C 283 0.00 1423 reject_low 3 ALIGNMENT 35 YS2-20b14.p1k chrm 460 391 84460 84531 C 70 84.29 1423 reject_low 21 ALIGNMENT 30 YS2-20b14.p1k chrm 434 346 46315 46403 C 89 80.90 1423 reject_low 47 ALIGNMENT 31 YS2-20b14.p1k chrm 359 434 2720 2793 F 76 82.89 1423 reject_low 32 ALIGNMENT 0 YS2-20b15.q1k chr05 62 927 449317 449316 F 866 0.00 1211 reject_low 44 ALIGNMENT 101 YS2-20b15.q1k chr06 906 1023 143535 143652 F 118 98.31 1211 reject_low 31 ALIGNMENT 25 YS2-20b15.p1k chr10 72 120 537900 537948 F 49 85.71 1354 reject_low 91 ALIGNMENT 101 YS2-20b15.q1k chr03 906 1023 84068 84185 F 118 98.31 1211 reject_low 6 ALIGNMENT 0 YS2-20b15.p1k chr01 62 151 189629 189628 F 90 0.00 1354 reject_low 51 ALIGNMENT 97 YS2-20b15.p1k chr01 36 153 160457 160575 F 118 96.61 1354 reject_low 4 ALIGNMENT 0 YS2-20b15.p1k chr04 62 151 981374 981373 F 90 0.00 1354 reject_low 69 ALIGNMENT 103 YS2-20b15.p1k chr06 153 36 143535 143653 C 118 98.31 1354 reject_low 3 ALIGNMENT 0 YS2-20b15.q1k chr13 802 62 190064 190063 C 741 0.00 1211 reject_low 59 ALIGNMENT 0 YS2-20b15.q1k chr02 62 905 9093 9092 F 844 0.00 1211 reject_low 28 ALIGNMENT 0 YS2-20b15.q1k chr05 62 905 62142 62141 F 844 0.00 1211 reject_low 42 ALIGNMENT 0 YS2-20b15.p1k chr01 857 155 189420 189419 C 703 0.00 1354 reject_low 9 ALIGNMENT 0 YS2-20b15.p1k chr04 151 62 651206 651205 C 90 0.00 1354 reject_low 49 ALIGNMENT 0 YS2-20b15.p1k chr01 62 152 183344 183343 F 91 0.00 1354 reject_low 46 ALIGNMENT 0 YS2-20b15.q1k chr13 62 905 196332 196331 F 844 0.00 1211 reject_low 43 ALIGNMENT 0 YS2-20b15.p1k chr04 151 62 645622 645621 C 90 0.00 1354 reject_low 61 ALIGNMENT 103 YS2-20b15.p1k chr04 36 153 878513 878631 F 118 98.31 1354 reject_low 16 ALIGNMENT 52 YS2-20b15.p1k chr02 152 253 9302 9401 F 102 86.27 1354 reject_low 68 ALIGNMENT 0 YS2-20b15.p1k chr14 256 857 519476 519475 F 602 0.00 1354 reject_low 60 ALIGNMENT 0 YS2-20b15.p1k chr12 154 857 976585 976584 F 704 0.00 1354 reject_low 25 ALIGNMENT 52 YS2-20b15.p1k chr05 253 152 135631 135730 C 102 86.27 1354 reject_low 70 ALIGNMENT 66 YS2-20b15.p1k chr12 152 251 656621 656720 F 100 90.00 1354 reject_low 62 ALIGNMENT 31 YS2-20b15.q1k chr13 906 1023 189752 189870 F 118 78.81 1211 reject_low 67 ALIGNMENT 50 YS2-20b15.q1k chr08 802 907 91782 91886 F 106 83.02 1211 reject_low 79 ALIGNMENT 0 YS2-20b15.p1k chr04 857 154 981166 981165 C 704 0.00 1354 reject_low 17 ALIGNMENT 67 YS2-20b15.p1k chr04 252 152 878322 878422 C 101 90.10 1354 reject_low 7,8 ALIGNMENT 39 YS2-20b15.p1k chr06 154 210 137851 137907 F 57 91.23 1354 reject_low 54 ALIGNMENT 0 YS2-20b15.p1k chr05 857 254 135632 135631 C 604 0.00 1354 reject_low 70 ALIGNMENT 0 YS2-20b15.p1k chr12 252 857 656720 656719 F 606 0.00 1354 reject_low 62 ALIGNMENT 0 YS2-20b15.q1k chr02 62 905 35268 35267 F 844 0.00 1211 reject_low 41 ALIGNMENT 29 YS2-20b15.q1k chr01 904 976 183134 183206 F 73 83.56 1211 reject_low 9 ALIGNMENT 105 YS2-20b15.p1k chr05 36 154 135821 135940 F 119 98.32 1354 reject_low 11 ALIGNMENT 0 YS2-20b15.q1k chr12 62 905 941189 941188 F 844 0.00 1211 reject_low 33 ALIGNMENT 50 YS2-20b15.q1k chr04 907 806 877652 877751 C 102 84.31 1211 reject_low 82 ALIGNMENT 51 YS2-20b15.p1k chr12 252 152 976278 976376 C 101 86.14 1354 reject_low 72 ALIGNMENT 83 YS2-20b15.q1k chr01 793 906 165837 165950 F 114 91.23 1211 reject_low 55 ALIGNMENT 103 YS2-20b15.p1k chr06 153 36 137908 138026 C 118 98.31 1354 reject_low 18 ALIGNMENT 44 YS2-20b15.p1k chr09 58 154 197390 197486 F 97 83.51 1354 reject_low 56 ALIGNMENT 103 YS2-20b15.p1k chr02 153 36 9093 9211 C 118 98.31 1354 reject_low 13 ALIGNMENT 0 YS2-20b15.p1k chr05 155 857 135940 135939 F 703 0.00 1354 reject_low 11 ALIGNMENT 0 YS2-20b15.q1k chr04 805 62 1352943 1352942 C 744 0.00 1211 reject_low 83 ALIGNMENT 50 YS2-20b15.q1k chr13 907 806 768756 768855 C 102 84.31 1211 reject_low 84 ALIGNMENT 0 YS2-20b15.p1k chr10 254 857 538325 538324 F 604 0.00 1354 reject_low 91 ALIGNMENT 47 YS2-20b15.q1k chr05 907 806 449504 449603 C 102 83.33 1211|1,0 reject_low 90 ALIGNMENT 0 YS2-20b15.q1k chr04 905 62 514017 514016 C 844 0.00 1211 reject_low 29 ALIGNMENT 0 YS2-20b15.p1k chr01 857 156 183135 183134 C 702 0.00 1354 reject_low 65 ALIGNMENT 0 YS2-20b15.q1k chr04 62 803 651102 651101 F 742 0.00 1211 reject_low 49 ALIGNMENT 0 YS2-20b15.p1k chr06 251 857 143840 143839 F 607 0.00 1354 reject_low 77 ALIGNMENT 49 YS2-20b15.p1k chr12 252 152 731694 731793 C 101 85.15 1354 reject_low 74 ALIGNMENT 95 YS2-20b15.q1k chr01 1023 906 160458 160575 C 118 96.61 1211 reject_low 4 ALIGNMENT 79 YS2-20b15.p1k chr03 153 67 84294 84380 C 87 98.85 1354 reject_low 6 ALIGNMENT 0 YS2-20b15.q1k chr14 803 62 519477 519476 C 742 0.00 1211 reject_low 64 ALIGNMENT 101 YS2-20b15.q1k chr04 1023 906 513899 514016 C 118 98.31 1211 reject_low 29 ALIGNMENT 101 YS2-20b15.q1k chr04 906 1023 871816 871933 F 118 98.31 1211 reject_low 7 ALIGNMENT 95 YS2-20b15.q1k chr13 906 1023 196332 196449 F 118 96.61 1211 reject_low 43 ALIGNMENT 0 YS2-20b15.p1k chr12 62 151 656621 656620 F 90 0.00 1354 reject_low 62 ALIGNMENT 0 YS2-20b15.q1k chr01 900 62 166169 166168 C 839 0.00 1211 reject_low 5 ALIGNMENT 0 YS2-20b15.p1k chr01 152 62 165951 165950 C 91 0.00 1354 reject_low 27 ALIGNMENT 0 YS2-20b15.p1k chr15 857 156 970281 970280 C 702 0.00 1354 reject_low 10 ALIGNMENT 0 YS2-20b15.p1k chr09 857 155 246217 246216 C 703 0.00 1354 reject_low 12 ALIGNMENT 101 YS2-20b15.q1k chr14 1023 906 726829 726946 C 118 98.31 1211 reject_low 38 ALIGNMENT 0 YS2-20b15.q1k chr04 62 905 1352634 1352633 F 844 0.00 1211 reject_low 30 ALIGNMENT 0 YS2-20b15.p1k chr12 857 253 976279 976278 C 605 0.00 1354 reject_low 72 ALIGNMENT 0 YS2-20b15.q1k chr04 805 62 872125 872124 C 744 0.00 1211 reject_low 81 ALIGNMENT 52 YS2-20b15.p1k chr04 152 253 981374 981473 F 102 86.27 1354 reject_low 69 ALIGNMENT 52 YS2-20b15.p1k chr15 152 253 970491 970590 F 102 86.27 1354 reject_low 71 ALIGNMENT 45 YS2-20b15.p1k chr07 152 253 817288 817387 F 102 84.31 1354 reject_low 78 ALIGNMENT 78 YS2-20b15.p1k chr09 266 151 197146 197263 C 116 91.38 1354 reject_low 53 ALIGNMENT 0 YS2-20b15.q1k chr04 904 62 651416 651415 C 843 0.00 1211 reject_low 2 ALIGNMENT 101 YS2-20b15.q1k chr13 1023 906 168564 168681 C 118 98.31 1211 reject_low 34 ALIGNMENT 0 YS2-20b15.q1k chr01 794 62 183457 183456 C 733 0.00 1211 reject_low 63 ALIGNMENT 0 YS2-20b15.p1k chr12 151 62 976377 976376 C 90 0.00 1354 reject_low 72 ALIGNMENT 0 YS2-20b15.p1k chr04 254 857 981473 981472 F 604 0.00 1354 reject_low 69 ALIGNMENT 0 YS2-20b15.p1k chr01 159 857 166168 166167 F 699 0.00 1354 reject_low 5 ALIGNMENT 0 YS2-20b15.p1k chr06 62 153 137851 137850 F 92 0.00 1354 reject_low 54 ALIGNMENT 0 YS2-20b15.q1k chr01 62 904 189419 189418 F 843 0.00 1211 reject_low 45 ALIGNMENT 101 YS2-20b15.q1k chr08 1023 906 91978 92095 C 118 98.31 1211 reject_low 32 ALIGNMENT 0 YS2-20b15.q1k chr04 62 905 877443 877442 F 844 0.00 1211 reject_low 8 ALIGNMENT 0 YS2-20b15.q1k chr13 62 905 184170 184169 F 844 0.00 1211 reject_low 66 ALIGNMENT 98 YS2-20b15.q1k chr02 906 1023 35268 35385 F 118 97.46 1211 reject_low 41 ALIGNMENT 90 YS2-20b15.q1k chr05 928 1023 449317 449412 F 96 100.00 1211 reject_low 44 ALIGNMENT 101 YS2-20b15.q1k chr02 906 1023 9093 9210 F 118 98.31 1211 reject_low 28 ALIGNMENT 0 YS2-20b15.p1k chr07 62 151 811661 811660 F 90 0.00 1354 reject_low 75 ALIGNMENT 0 YS2-20b15.q1k chr13 780 62 196671 196670 C 719 0.00 1211 reject_low 47 ALIGNMENT 103 YS2-20b15.p1k chr12 153 36 656412 656530 C 118 98.31 1354 reject_low 23 ALIGNMENT 0 YS2-20b15.q1k chr02 792 62 29963 29962 C 731 0.00 1211 reject_low 76 ALIGNMENT 103 YS2-20b15.p1k chr07 153 36 817079 817197 C 118 98.31 1354 reject_low 20 ALIGNMENT 0 YS2-20b15.q1k chr13 805 62 768856 768855 C 744 0.00 1211 reject_low 84 ALIGNMENT 0 YS2-20b15.p1k chr04 155 857 651415 651414 F 703 0.00 1354 reject_low 2 ALIGNMENT 0 YS2-20b15.q1k chr08 62 801 91782 91781 F 740 0.00 1211 reject_low 79 ALIGNMENT 0 YS2-20b15.p1k chr07 254 857 811760 811759 F 604 0.00 1354 reject_low 75 ALIGNMENT 0 YS2-20b15.p1k chr02 62 153 9070 9069 F 92 0.00 1354 reject_low 57 ALIGNMENT 68 YS2-20b15.q1k chr04 804 907 651102 651205 F 104 88.46 1211 reject_low 49 ALIGNMENT 0 YS2-20b15.p1k chr01 278 857 189752 189751 F 580 0.00 1354 reject_low 51 ALIGNMENT 0 YS2-20b15.p1k chr08 154 857 389512 389511 F 704 0.00 1354 reject_low 21 ALIGNMENT 0 YS2-20b15.p1k chr14 62 150 519372 519371 F 89 0.00 1354 reject_low 60 ALIGNMENT 0 YS2-20b15.q1k chr03 62 956 151568 151567 F 895 0.00 1211 reject_low 85 ALIGNMENT 0 YS2-20b15.q1k chr03 62 905 84068 84067 F 844 0.00 1211 reject_low 6 ALIGNMENT 48 YS2-20b15.p1k chr06 152 266 138117 138229 F 115 83.48 1354 reject_low 52 ALIGNMENT 105 YS2-20b15.p1k chr09 154 36 246216 246335 C 119 98.32 1354 reject_low 12 ALIGNMENT 0 YS2-20b15.q1k chr13 905 62 168682 168681 C 844 0.00 1211 reject_low 34 ALIGNMENT 97 YS2-20b15.q1k chr01 1023 901 166046 166168 C 123 95.93 1211 reject_low 5 ALIGNMENT 65 YS2-20b15.q1k chr14 908 804 519372 519476 C 105 87.62 1211 reject_low 64 ALIGNMENT 0 YS2-20b15.p1k chr04 154 857 878631 878630 F 704 0.00 1354 reject_low 16 ALIGNMENT 0 YS2-20b15.q1k chr05 906 907 449316 449504 C 0 0.00 1211 reject_low 90 ALIGNMENT 103 YS2-20b15.p1k chr08 36 153 389394 389512 F 118 98.31 1354 reject_low 21 ALIGNMENT 46 YS2-20b15.q1k chr02 892 806 35492 35576 C 87 86.21 1211 reject_low 87 ALIGNMENT 0 YS2-20b15.p1k chr01 857 267 160250 160249 C 591 0.00 1354 reject_low 50 ALIGNMENT 0 YS2-20b15.p1k chr07 254 857 817387 817386 F 604 0.00 1354 reject_low 78 ALIGNMENT 0 YS2-20b15.p1k chr03 857 154 84295 84294 C 704 0.00 1354 reject_low 6 ALIGNMENT 0 YS2-20b15.q1k chr03 62 905 84294 84293 F 844 0.00 1211 reject_low 48 ALIGNMENT 0 YS2-20b15.p1k chr04 857 252 645523 645522 C 606 0.00 1354 reject_low 61 ALIGNMENT 0 YS2-20b15.q1k chr14 62 905 519164 519163 F 844 0.00 1211 reject_low 36 ALIGNMENT 0 YS2-20b15.p1k chr06 267 857 138229 138228 F 591 0.00 1354 reject_low 52 ALIGNMENT 0 YS2-20b15.p1k chr12 151 62 731794 731793 C 90 0.00 1354 reject_low 74 ALIGNMENT 101 YS2-20b15.q1k chr04 906 1023 1352634 1352751 F 118 98.31 1211 reject_low 30 ALIGNMENT 0 YS2-20b15.p1k chr09 155 857 197486 197485 F 703 0.00 1354 reject_low 56 ALIGNMENT 0 YS2-20b15.q1k chr02 805 62 35577 35576 C 744 0.00 1211 reject_low 87 ALIGNMENT 98 YS2-20b15.q1k chr02 906 1023 29641 29758 F 118 97.46 1211 reject_low 40 ALIGNMENT 0 YS2-20b15.q1k chr12 805 62 941498 941497 C 744 0.00 1211 reject_low 88 ALIGNMENT 48 YS2-20b15.q1k chr04 801 907 513703 513807 F 107 83.18 1211 reject_low 86 ALIGNMENT 20 YS2-20b15.p1k chr02 154 173 9070 9089 F 20 100.00 1354 reject_low 57 ALIGNMENT 105 YS2-20b15.p1k chr04 36 154 651296 651415 F 119 98.32 1354 reject_low 2 ALIGNMENT 0 YS2-20b15.q1k chr04 62 800 513703 513702 F 739 0.00 1211 reject_low 86 ALIGNMENT 101 YS2-20b15.q1k chr13 906 1023 768547 768664 F 118 98.31 1211 reject_low 35 ALIGNMENT 0 YS2-20b15.q1k chr01 905 62 160576 160575 C 844 0.00 1211 reject_low 4 ALIGNMENT 46 YS2-20b15.q1k chr06 907 793 138117 138229 C 115 81.74 1211 reject_low 54 ALIGNMENT 103 YS2-20b15.p1k chr04 36 153 645712 645830 F 118 98.31 1354 reject_low 15 ALIGNMENT 0 YS2-20b15.q1k chr13 62 905 768547 768546 F 844 0.00 1211 reject_low 35 ALIGNMENT 0 YS2-20b15.p1k chr12 154 857 732002 732001 F 704 0.00 1354 reject_low 24 ALIGNMENT 0 YS2-20b15.p1k chr09 857 267 197147 197146 C 591 0.00 1354 reject_low 53 ALIGNMENT 35 YS2-20b15.p1k chr01 155 83 183134 183206 C 73 84.93 1354 reject_low 65 ALIGNMENT 79 YS2-20b15.q1k chr13 906 803 189960 190063 C 104 92.31 1211 reject_low 59 ALIGNMENT 0 YS2-20b15.p1k chr01 265 857 183456 183455 F 593 0.00 1354 reject_low 46 ALIGNMENT 0 YS2-20b15.q1k chr01 62 792 160249 160248 F 731 0.00 1211 reject_low 27 ALIGNMENT 0 YS2-20b15.q1k chr14 905 62 726947 726946 C 844 0.00 1211 reject_low 38 ALIGNMENT 102 YS2-20b15.q1k chr04 1023 905 651297 651415 C 119 98.32 1211 reject_low 2 ALIGNMENT 0 YS2-20b15.q1k chr06 62 905 143535 143534 F 844 0.00 1211 reject_low 31 ALIGNMENT 0 YS2-20b15.p1k chr12 857 154 656413 656412 C 704 0.00 1354 reject_low 23 ALIGNMENT 43 YS2-20b15.q1k chr12 907 806 941398 941497 C 102 82.35 1211 reject_low 88 ALIGNMENT 0 YS2-20b15.p1k chr07 857 154 811453 811452 C 704 0.00 1354 reject_low 19 ALIGNMENT 25 YS2-20b15.q1k chr03 957 1023 151568 151635 F 67 82.09 1211 reject_low 85 ALIGNMENT 101 YS2-20b15.q1k chr12 906 1023 941189 941306 F 118 98.31 1211 reject_low 33 ALIGNMENT 94 YS2-20b15.p1k chr01 154 49 189419 189524 C 106 98.11 1354 reject_low 9 ALIGNMENT 0 YS2-20b15.p1k chr14 857 154 519165 519164 C 704 0.00 1354 reject_low 26 ALIGNMENT 0 YS2-20b15.p1k chr01 857 267 165838 165837 C 591 0.00 1354 reject_low 27 ALIGNMENT 0 YS2-20b15.q1k chr06 808 62 143841 143840 C 747 0.00 1211 reject_low 52 ALIGNMENT 59 YS2-20b15.p1k chr04 241 152 651116 651205 C 90 90.00 1354 reject_low 49 ALIGNMENT 0 YS2-20b15.q1k chr01 781 62 189753 189752 C 720 0.00 1211 reject_low 46 ALIGNMENT 101 YS2-20b15.q1k chr15 1023 906 704279 704396 C 118 98.31 1211 reject_low 39 ALIGNMENT 67 YS2-20b15.p1k chr14 151 255 519372 519476 F 105 89.52 1354 reject_low 60 ALIGNMENT 24 YS2-20b15.p1k chr03 141 36 151530 151636 C 106 77.36 1354 reject_low 80 ALIGNMENT 103 YS2-20b15.p1k chr07 153 36 811452 811570 C 118 98.31 1354 reject_low 19 ALIGNMENT 0 YS2-20b15.q1k chr04 805 62 877752 877751 C 744 0.00 1211 reject_low 82 ALIGNMENT 101 YS2-20b15.q1k chr04 906 1023 877443 877560 F 118 98.31 1211 reject_low 8 ALIGNMENT 0 YS2-20b15.q1k chr02 62 905 29641 29640 F 844 0.00 1211 reject_low 40 ALIGNMENT 0 YS2-20b15.p1k chr04 857 253 878323 878322 C 605 0.00 1354 reject_low 7,8 ALIGNMENT 103 YS2-20b15.p1k chr04 153 36 981165 981283 C 118 98.31 1354 reject_low 17 ALIGNMENT 63 YS2-20b15.p1k chr01 153 264 183344 183456 F 112 87.50 1354 reject_low 46 ALIGNMENT 0 YS2-20b15.p1k chr07 62 151 817288 817287 F 90 0.00 1354 reject_low 78 ALIGNMENT 98 YS2-20b15.q1k chr05 906 1023 62142 62259 F 118 97.46 1211 reject_low 42 ALIGNMENT 0 YS2-20b15.p1k chr06 211 857 137907 137906 F 647 0.00 1354 reject_low 54 ALIGNMENT 53 YS2-20b15.p1k chr01 152 277 189629 189752 F 126 83.33 1354 reject_low 51 ALIGNMENT 0 YS2-20b15.p1k chr10 857 154 538018 538017 C 704 0.00 1354 reject_low 22 ALIGNMENT 0 YS2-20b15.p1k chr06 62 151 143744 143743 F 90 0.00 1354 reject_low 77 ALIGNMENT 0 YS2-20b15.q1k chr01 62 903 183134 183133 F 842 0.00 1211 reject_low 9 ALIGNMENT 55 YS2-20b15.q1k chr14 801 907 726633 726737 F 107 85.05 1211 reject_low 73 ALIGNMENT 0 YS2-20b15.p1k chr05 151 62 135731 135730 C 90 0.00 1354 reject_low 70 ALIGNMENT 103 YS2-20b15.p1k chr12 36 153 976467 976585 F 118 98.31 1354 reject_low 25 ALIGNMENT 0 YS2-20b15.p1k chr04 154 857 645830 645829 F 704 0.00 1354 reject_low 15 ALIGNMENT 84 YS2-20b15.p1k chr01 266 153 165837 165950 C 114 92.98 1354 reject_low 27 ALIGNMENT 103 YS2-20b15.p1k chr12 36 153 731884 732002 F 118 98.31 1354 reject_low 24 ALIGNMENT 0 YS2-20b15.q1k chr14 905 62 562366 562365 C 844 0.00 1211 reject_low 37 ALIGNMENT 0 YS2-20b15.q1k chr01 62 792 165837 165836 F 731 0.00 1211 reject_low 55 ALIGNMENT 0 YS2-20b15.q1k chr06 62 905 137908 137907 F 844 0.00 1211 reject_low 3 ALIGNMENT 0 YS2-20b15.p1k chr01 154 857 160575 160574 F 704 0.00 1354 reject_low 4 ALIGNMENT 101 YS2-20b15.q1k chr14 906 1023 519164 519281 F 118 98.31 1211 reject_low 36 ALIGNMENT 47 YS2-20b15.q1k chr02 907 793 29850 29962 C 115 81.74 1211 reject_low 76 ALIGNMENT 50 YS2-20b15.q1k chr04 907 806 872025 872124 C 102 84.31 1211 reject_low 81 ALIGNMENT 0 YS2-20b15.q1k chr14 62 805 562057 562056 F 744 0.00 1211 reject_low 89 ALIGNMENT 0 YS2-20b15.p1k chr01 82 62 183207 183206 C 21 0.00 1354 reject_low 65 ALIGNMENT 0 YS2-20b15.q1k chr15 905 62 704397 704396 C 844 0.00 1211 reject_low 39 ALIGNMENT 46 YS2-20b15.p1k chr06 152 250 143744 143840 F 99 84.85 1354 reject_low 77 ALIGNMENT 50 YS2-20b15.q1k chr04 907 806 1352843 1352942 C 102 84.31 1211 reject_low 83 ALIGNMENT 101 YS2-20b15.q1k chr14 1023 906 562248 562365 C 118 98.31 1211 reject_low 37 ALIGNMENT 0 YS2-20b15.p1k chr15 254 857 970590 970589 F 604 0.00 1354 reject_low 71 ALIGNMENT 73 YS2-20b15.q1k chr03 906 992 84294 84380 F 87 97.70 1211 reject_low 48 ALIGNMENT 0 YS2-20b15.p1k chr09 150 62 197264 197263 C 89 0.00 1354 reject_low 53 ALIGNMENT 0 YS2-20b15.p1k chr15 62 151 970491 970490 F 90 0.00 1354 reject_low 71 ALIGNMENT 0 YS2-20b15.p1k chr04 151 62 878423 878422 C 90 0.00 1354 reject_low 7,8 ALIGNMENT 0 YS2-20b15.q1k chr13 62 905 189752 189751 F 844 0.00 1211 reject_low 67 ALIGNMENT 31 YS2-20b15.q1k chr13 906 1023 184170 184288 F 118 78.81 1211 reject_low 66 ALIGNMENT 0 YS2-20b15.q1k chr02 792 62 9415 9414 C 731 0.00 1211 reject_low 57 ALIGNMENT 0 YS2-20b15.p1k chr02 62 151 9302 9301 F 90 0.00 1354 reject_low 68 ALIGNMENT 0 YS2-20b15.q1k chr06 792 62 138230 138229 C 731 0.00 1211 reject_low 54 ALIGNMENT 103 YS2-20b15.p1k chr10 153 36 538017 538135 C 118 98.31 1354 reject_low 22 ALIGNMENT 0 YS2-20b15.q1k chr04 62 905 871816 871815 F 844 0.00 1211 reject_low 7 ALIGNMENT 101 YS2-20b15.q1k chr06 906 1023 137908 138025 F 118 98.31 1211 reject_low 3 ALIGNMENT 0 YS2-20b15.p1k chr03 857 154 84069 84068 C 704 0.00 1354 reject_low 14 ALIGNMENT 0 YS2-20b15.p1k chr07 857 154 817080 817079 C 704 0.00 1354 reject_low 20 ALIGNMENT 84 YS2-20b15.p1k chr01 266 153 160249 160362 C 114 92.98 1354 reject_low 50 ALIGNMENT 44 YS2-20b15.q1k chr06 907 809 143744 143840 C 99 82.83 1211 reject_low 52 ALIGNMENT 750 YS2-20b15.p1k chr03 153 1021 151725 152593 F 869 97.12 1354 accept_chi 0 ALIGNMENT 83 YS2-20b15.q1k chr01 793 906 160249 160362 F 114 91.23 1211 reject_low 27 ALIGNMENT 0 YS2-20b15.p1k chr03 857 142 151531 151530 C 716 0.00 1354 reject_low 80 ALIGNMENT 99 YS2-20b15.p1k chr01 36 158 166045 166168 F 123 95.93 1354 reject_low 5 ALIGNMENT 95 YS2-20b15.q1k chr05 1023 906 449199 449316 C 118 96.61 1211|0,1 reject_low 90 ALIGNMENT 53 YS2-20b15.q1k chr02 907 793 9302 9414 C 115 83.48 1211 reject_low 57 ALIGNMENT 0 YS2-20b15.p1k chr04 857 242 651117 651116 C 616 0.00 1354 reject_low 49 ALIGNMENT 0 YS2-20b15.p1k chr12 857 253 731695 731694 C 605 0.00 1354 reject_low 74 ALIGNMENT 0 YS2-20b15.p1k chr01 152 62 160363 160362 C 91 0.00 1354 reject_low 50 ALIGNMENT 65 YS2-20b15.q1k chr01 906 795 183344 183456 C 112 86.61 1211 reject_low 63 ALIGNMENT 0 YS2-20b15.q1k chr05 805 62 449604 449603 C 744 0.00 1211 reject_low 90 ALIGNMENT 0 YS2-20b15.p1k chr10 121 151 537949 538225 F 31 0.00 1354 reject_low 91 ALIGNMENT 0 YS2-20b15.p1k chr02 254 857 9401 9400 F 604 0.00 1354 reject_low 68 ALIGNMENT 0 YS2-20b15.q1k chr13 802 62 184482 184481 C 741 0.00 1211 reject_low 58 ALIGNMENT 0 YS2-20b15.p1k chr06 857 154 143536 143535 C 704 0.00 1354 reject_low 3 ALIGNMENT 66 YS2-20b15.p1k chr04 251 152 645522 645621 C 100 90.00 1354 reject_low 61 ALIGNMENT 0 YS2-20b15.p1k chr03 62 152 151725 151724 F 91 0.00 1354 accept_chi 0 ALIGNMENT 45 YS2-20b15.p1k chr10 152 253 538226 538325 F 102 84.31 1354 reject_low 91 ALIGNMENT 51 YS2-20b15.q1k chr01 907 782 189629 189752 C 126 81.75 1211 reject_low 46 ALIGNMENT 106 YS2-20b15.p1k chr15 155 36 970280 970400 C 120 98.33 1354 reject_low 10 ALIGNMENT 0 YS2-20b15.q1k chr08 905 62 92096 92095 C 844 0.00 1211 reject_low 32 ALIGNMENT 79 YS2-20b15.q1k chr13 906 803 184378 184481 C 104 92.31 1211 reject_low 58 ALIGNMENT 88 YS2-20b15.q1k chr01 905 1010 189419 189524 F 106 97.17 1211 reject_low 45 ALIGNMENT 86 YS2-20b15.q1k chr13 906 781 196545 196670 C 126 89.68 1211 reject_low 47 ALIGNMENT 0 YS2-20b15.p1k chr06 857 154 137909 137908 C 704 0.00 1354 reject_low 18 ALIGNMENT 103 YS2-20b15.p1k chr03 153 36 84068 84186 C 118 98.31 1354 reject_low 14 ALIGNMENT 0 YS2-20b15.p1k chr02 174 857 9089 9088 F 684 0.00 1354 reject_low 57 ALIGNMENT 48 YS2-20b15.p1k chr07 152 253 811661 811760 F 102 85.29 1354 reject_low 75 ALIGNMENT 0 YS2-20b15.p1k chr02 857 154 9094 9093 C 704 0.00 1354 reject_low 13 ALIGNMENT 43 YS2-20b15.q1k chr14 806 907 562057 562156 F 102 82.35 1211 reject_low 89 ALIGNMENT 103 YS2-20b15.p1k chr14 153 36 519164 519282 C 118 98.31 1354 reject_low 26 ALIGNMENT 0 YS2-20b15.q1k chr14 62 800 726633 726632 F 739 0.00 1211 reject_low 73 ALIGNMENT 0 YS2-20b15.p1k chr06 62 151 138117 138116 F 90 0.00 1354 reject_low 52 ALIGNMENT 751 YS2-20b15.q1k chr03 906 42 151725 152588 C 865 97.11 1211 accept_chi 1 ALIGNMENT 41 YS2-20b16.q1k vc_3 254 214 2472 2512 C 41 100.00 254 reject_vc 4 ALIGNMENT 0 YS2-20b16.q1k vc_1 213 62 2513 2512 C 152 0.00 254 reject_vc 2 ALIGNMENT 41 YS2-20b16.q1k vc_1 254 214 2472 2512 C 41 100.00 254 reject_vc 2 ALIGNMENT 41 YS2-20b16.q1k vc_5 254 208 5025 5071 C 47 95.74 254 reject_vc 0 ALIGNMENT 41 YS2-20b16.q1k vc_2 254 214 2105 2145 C 41 100.00 254 reject_vc 3 ALIGNMENT 0 YS2-20b16.q1k vc_4 62 213 5831 5830 F 152 0.00 254 reject_vc 5 ALIGNMENT 38 YS2-20b16.q1k vc_7 217 254 13525 13562 F 38 100.00 254 reject_vc 6 ALIGNMENT 0 YS2-20b16.q1k vc_5 207 62 5072 5071 C 146 0.00 254 reject_vc 0 ALIGNMENT 0 YS2-20b16.q1k vc_5 207 62 45 44 C 146 0.00 254 reject_vc 1 ALIGNMENT 0 YS2-20b16.q1k vc_7 62 216 13525 13524 F 155 0.00 254 reject_vc 6 ALIGNMENT 38 YS2-20b16.q1k vc_5 251 208 1 44 C 44 95.45 254 reject_vc 1 ALIGNMENT 0 YS2-20b16.q1k vc_3 213 62 2513 2512 C 152 0.00 254 reject_vc 4 ALIGNMENT 0 YS2-20b16.q1k vc_2 213 62 2146 2145 C 152 0.00 254 reject_vc 3 ALIGNMENT 41 YS2-20b16.q1k vc_4 214 254 5831 5871 F 41 100.00 254 reject_vc 5 ALIGNMENT 177 YS2-20b17.p1k chr10 1110 802 90782 91098 C 309 87.70 1284 reject_low 1 ALIGNMENT 0 YS2-20b17.p1k chr10 253 62 91658 91657 C 192 0.00 1284 reject_low 1 ALIGNMENT 1003 YS2-20b17.q1k chr11 39 1192 106989 108150 F 1154 96.45 1202 accept 0 ALIGNMENT 991 YS2-20b17.p1k chr11 1248 39 109115 110351 C 1210 96.03 1284 accept 0 ALIGNMENT 0 YS2-20b17.p1k chr10 801 514 91099 91397 C 288 0.00 1284 reject_low 1 ALIGNMENT 193 YS2-20b17.p1k chr10 513 254 91398 91657 C 260 91.92 1284 reject_low 1 ALIGNMENT 181 YS2-20b18.p1k chr10 1106 245 90780 91657 C 862 76.45 1275 reject_low 1 ALIGNMENT 0 YS2-20b18.p1k chr10 244 62 91658 91657 C 183 0.00 1275 reject_low 1 ALIGNMENT 998 YS2-20b18.p1k chr11 1230 27 109130 110355 C 1204 95.76 1275 accept 0 ALIGNMENT 1012 YS2-20b18.q1k chr11 39 1189 106989 108153 F 1151 96.52 1206 accept 0 ALIGNMENT 0 YS2-20b19.q1k chr04 894 793 538729 538728 C 102 0.00 1200 reject_low 2 ALIGNMENT 21 YS2-20b19.q1k chr04 792 760 538728 538760 C 33 100.00 1200 reject_low 2 ALIGNMENT 948 YS2-20b19.q1k chr10 1167 20 666759 667898 C 1148 95.47 1200 accept 0 ALIGNMENT 0 YS2-20b19.q1k chr04 759 62 538761 538760 C 698 0.00 1200 reject_low 2 ALIGNMENT 0 YS2-20b19.q1k chr07 791 894 79033 79032 F 104 0.00 1200 reject_low 1 ALIGNMENT 20 YS2-20b19.q1k chr07 749 790 78992 79033 F 42 95.24 1200 reject_low 1 ALIGNMENT 0 YS2-20b19.q1k chr10 894 789 11348 11347 C 106 0.00 1200 reject_low 3 ALIGNMENT 936 YS2-20b19.p1k chr10 29 1112 662607 663706 F 1084 95.20 1340 accept 0 ALIGNMENT 20 YS2-20b19.q1k chr10 788 758 11347 11377 C 31 100.00 1200 reject_low 3 ALIGNMENT 0 YS2-20b19.q1k chr07 62 748 78992 78991 F 687 0.00 1200 reject_low 1 ALIGNMENT 0 YS2-20b19.q1k chr10 757 62 11378 11377 C 696 0.00 1200 reject_low 3 ALIGNMENT 994 YS2-20b20.q1k chr04 31 1192 675473 676648 F 1162 96.04 1197 accept 0 ALIGNMENT 994 YS2-20b20.p1k chr04 1192 33 678917 680084 C 1160 95.34 1390 accept 0 ALIGNMENT 127 YS2-20b21.p1k chr04 36 196 1355075 1355236 F 161 93.79 1288 reject_low 1 ALIGNMENT 982 YS2-20b21.p1k chr13 1140 36 225339 226441 C 1105 97.47 1288 accept 0 ALIGNMENT 0 YS2-20b21.p1k chr04 197 846 1355236 1355235 F 650 0.00 1288 reject_low 1 ALIGNMENT 951 YS2-20b21.q1k chr13 40 1116 224914 225999 F 1077 96.75 1119 accept 0 ALIGNMENT 938 YS2-20b23.q1k chr06 1114 34 187536 188631 C 1081 97.04 1117 accept 0 ALIGNMENT 0 YS2-20b24.q1k vc_1 184 62 2513 2512 C 123 0.00 225 reject_low 1 ALIGNMENT 38 YS2-20b24.q1k vc_7 188 225 13525 13562 F 38 100.00 225 reject_low 5 ALIGNMENT 41 YS2-20b24.q1k vc_4 185 225 5831 5871 F 41 100.00 225 reject_low 3 ALIGNMENT 36 YS2-20b24.q1k vc_5 222 187 1 36 C 36 100.00 225 reject_low 6 ALIGNMENT 0 YS2-20b24.q1k vc_3 184 62 2513 2512 C 123 0.00 225 reject_low 2 ALIGNMENT 0 YS2-20b24.q1k vc_5 186 62 37 36 C 125 0.00 225 reject_low 6 ALIGNMENT 92 YS2-20b24.q1k chr07 184 39 11771 11917 C 146 91.10 225 accept_tel 0 ALIGNMENT 0 YS2-20b24.q1k vc_4 62 184 5831 5830 F 123 0.00 225 reject_low 3 ALIGNMENT 39 YS2-20b24.q1k vc_5 225 187 5025 5063 C 39 100.00 225 reject_low 4 ALIGNMENT 0 YS2-20b24.q1k chr07 225 185 11772 11771 C 41 0.00 225 accept_tel 0 ALIGNMENT 0 YS2-20b24.q1k vc_5 186 62 5064 5063 C 125 0.00 225 reject_low 4 ALIGNMENT 41 YS2-20b24.q1k vc_3 225 185 2472 2512 C 41 100.00 225 reject_low 2 ALIGNMENT 41 YS2-20b24.q1k vc_1 225 185 2472 2512 C 41 100.00 225 reject_low 1 ALIGNMENT 0 YS2-20b24.q1k vc_7 62 187 13525 13524 F 126 0.00 225 reject_low 5 ALIGNMENT 879 YS2-20c01.p1k chr15 33 1087 745726 746781 F 1055 95.92 1336 accept 0 ALIGNMENT 972 YS2-20c01.q1k chr15 1153 50 749901 751012 C 1104 96.83 1157 accept 0 ALIGNMENT 877 YS2-20c02.q1k chr09 30 920 51807 52697 F 891 99.66 921 accept_chi 0 ALIGNMENT 195 YS2-20c02.p1k vc_2 1251 942 1783 2105 C 310 89.03 1365 reject_low 3 ALIGNMENT 195 YS2-20c02.p1k vc_7 942 1251 100 422 F 310 89.03 1365 reject_low 7 ALIGNMENT 860 YS2-20c02.p1k chr09 924 35 51807 52697 C 890 99.21 1365 accept_chi 1 ALIGNMENT 0 YS2-20c02.p1k vc_4 62 941 5871 5870 F 880 0.00 1365 reject_low 5 ALIGNMENT 195 YS2-20c02.p1k vc_3 1251 942 1783 2105 C 310 89.03 1365 reject_low 4 ALIGNMENT 26 YS2-20c02.p1k vc_1 972 942 2441 2472 C 31 96.77 1365 reject_low 9 ALIGNMENT 0 YS2-20c02.p1k vc_1 941 62 2106 2105 C 880 0.00 1365 reject_low 2 ALIGNMENT 0 YS2-20c02.p1k vc_3 941 62 2106 2105 C 880 0.00 1365 reject_low 4 ALIGNMENT 0 YS2-20c02.p1k vc_7 62 941 13562 13561 F 880 0.00 1365 reject_low 8 ALIGNMENT 195 YS2-20c02.p1k vc_4 942 1251 5871 6193 F 310 89.03 1365 reject_low 5 ALIGNMENT 0 YS2-20c02.p1k vc_2 941 62 2106 2105 C 880 0.00 1365 reject_low 3 ALIGNMENT 195 YS2-20c02.p1k vc_7 942 1251 13562 13884 F 310 89.03 1365 reject_low 8 ALIGNMENT 0 YS2-20c02.p1k vc_1 941 62 2473 2472 C 880 0.00 1365 reject_low 9 ALIGNMENT 0 YS2-20c02.p1k vc_3 941 62 2473 2472 C 880 0.00 1365 reject_low 10 ALIGNMENT 26 YS2-20c02.p1k vc_3 972 942 2441 2472 C 31 96.77 1365 reject_low 10 ALIGNMENT 195 YS2-20c02.p1k vc_5 1251 942 4703 5025 C 310 89.03 1365 reject_low 6 ALIGNMENT 195 YS2-20c02.p1k vc_1 1251 942 1783 2105 C 310 89.03 1365 reject_low 2 ALIGNMENT 0 YS2-20c02.p1k vc_7 62 941 100 99 F 880 0.00 1365 reject_low 7 ALIGNMENT 0 YS2-20c02.p1k vc_5 941 62 5026 5025 C 880 0.00 1365 reject_low 6 ALIGNMENT 952 YS2-20c03.p1k chr01 1135 31 126504 127604 C 1105 96.38 1296 accept 0 ALIGNMENT 0 YS2-20c04.q1k chr04 53 291 573591 573833 F 239 0.00 1198 reject_bad_break 0 ALIGNMENT 410 YS2-20c04.q1k chr04 292 966 573834 574510 F 675 87.41 1198 reject_bad_break 0 ALIGNMENT 35 YS2-20c04.q1k chr04 5 52 573544 573590 F 48 91.67 1198 reject_bad_break 0 ALIGNMENT 0 YS2-20c07.q1k vc_7 62 815 13525 13524 F 754 0.00 853 reject_low 6 ALIGNMENT 40 YS2-20c07.q1k vc_4 813 853 5831 5871 F 41 97.56 853 reject_low 4 ALIGNMENT 725 YS2-20c07.p1k chr13 34 788 269027 269783 F 755 99.60 788 accept_chi 1 ALIGNMENT 38 YS2-20c07.q1k vc_7 816 853 13525 13562 F 38 100.00 853 reject_low 6 ALIGNMENT 725 YS2-20c07.q1k chr13 812 50 269022 269783 C 763 99.34 853 accept_chi 0 ALIGNMENT 40 YS2-20c07.q1k vc_1 853 813 2472 2512 C 41 97.56 853 reject_low 2 ALIGNMENT 0 YS2-20c07.q1k chr13 853 813 269023 269022 C 41 0.00 853 accept_chi 0 ALIGNMENT 0 YS2-20c07.q1k vc_1 812 62 2513 2512 C 751 0.00 853 reject_low 2 ALIGNMENT 0 YS2-20c07.q1k vc_3 812 62 2513 2512 C 751 0.00 853 reject_low 3 ALIGNMENT 0 YS2-20c07.q1k vc_5 815 62 36 35 C 754 0.00 853 reject_low 7 ALIGNMENT 35 YS2-20c07.q1k vc_5 850 816 1 35 C 35 100.00 853 reject_low 7 ALIGNMENT 38 YS2-20c07.q1k vc_5 853 816 5025 5062 C 38 100.00 853 reject_low 5 ALIGNMENT 0 YS2-20c07.q1k vc_4 62 812 5831 5830 F 751 0.00 853 reject_low 4 ALIGNMENT 40 YS2-20c07.q1k vc_3 853 813 2472 2512 C 41 97.56 853 reject_low 3 ALIGNMENT 0 YS2-20c07.q1k vc_5 815 62 5063 5062 C 754 0.00 853 reject_low 5 ALIGNMENT 987 YS2-20c08.p1k chr16 1216 31 159086 160281 C 1186 95.78 1374 accept 0 ALIGNMENT 1042 YS2-20c08.q1k chr16 37 1225 157391 158594 F 1189 97.14 1228 accept 0 ALIGNMENT 649 YS2-20c10.q1k chr04 711 40 1269231 1269902 C 672 99.85 711 accept_chi 1 ALIGNMENT 0 YS2-20c10.p1k chr04 703 721 1269902 1269901 F 19 0.00 721 accept_chi 0 ALIGNMENT 649 YS2-20c10.p1k chr04 31 702 1269231 1269902 F 672 99.85 721 accept_chi 0 ALIGNMENT 0 YS2-20c11.q1k chr15 802 62 427989 427988 C 741 0.00 1227 reject_low 2 ALIGNMENT 0 YS2-20c11.q1k chr11 802 62 576160 576159 C 741 0.00 1227 reject_low 1 ALIGNMENT 0 YS2-20c11.q1k chr15 819 820 427918 427971 C 0 0.00 1227 reject_low 2 ALIGNMENT 25 YS2-20c11.q1k chr15 830 803 427961 427988 C 28 100.00 1227|11,0 reject_low 2 ALIGNMENT 25 YS2-20c11.q1k chr11 830 803 576132 576159 C 28 100.00 1227 reject_low 1 ALIGNMENT 988 YS2-20c11.q1k chr09 48 1212 375855 377024 F 1165 95.79 1227 accept 0 ALIGNMENT 21 YS2-20c11.q1k chr15 830 808 427907 427929 C 23 100.00 1227|0,12 reject_low 2 ALIGNMENT 1010 YS2-20c11.p1k chr09 1177 34 379560 380707 C 1144 96.85 1314 accept 0 ALIGNMENT 0 YS2-20c11.q1k chr11 889 831 576133 576132 C 59 0.00 1227 reject_low 1 ALIGNMENT 0 YS2-20c11.q1k chr15 889 831 427908 427907 C 59 0.00 1227 reject_low 2 ALIGNMENT 204 YS2-20c12.p1k vc_7 1 397 456 847 F 397 85.14 793 reject_vc 4 ALIGNMENT 210 YS2-20c12.p1k vc_5 397 1 4278 4669 C 397 85.89 793 reject_vc 3 ALIGNMENT 0 YS2-20c12.q1k vc_1 220 62 2513 2512 C 159 0.00 261 reject_vc 7 ALIGNMENT 0 YS2-20c12.q1k vc_4 62 220 5831 5830 F 159 0.00 261 reject_vc 10 ALIGNMENT 0 YS2-20c12.q1k vc_3 220 62 2513 2512 C 159 0.00 261 reject_vc 9 ALIGNMENT 38 YS2-20c12.q1k vc_7 224 261 13525 13562 F 38 100.00 261 reject_vc 12 ALIGNMENT 41 YS2-20c12.q1k vc_4 221 261 5831 5871 F 41 100.00 261 reject_vc 10 ALIGNMENT 0 YS2-20c12.q1k vc_5 222 62 5064 5063 C 161 0.00 261 reject_vc 11 ALIGNMENT 41 YS2-20c12.q1k vc_2 261 221 2105 2145 C 41 100.00 261 reject_vc 8 ALIGNMENT 41 YS2-20c12.q1k vc_1 261 221 2472 2512 C 41 100.00 261 reject_vc 7 ALIGNMENT 41 YS2-20c12.q1k vc_3 261 221 2472 2512 C 41 100.00 261 reject_vc 9 ALIGNMENT 0 YS2-20c12.q1k vc_7 62 223 13525 13524 F 162 0.00 261 reject_vc 12 ALIGNMENT 210 YS2-20c12.p1k vc_3 397 1 1358 1749 C 397 85.89 793 reject_vc 2 ALIGNMENT 204 YS2-20c12.p1k vc_6 1 363 3712 4072 F 363 86.23 793 reject_vc 6 ALIGNMENT 39 YS2-20c12.q1k vc_5 261 223 5025 5063 C 39 100.00 261 reject_vc 11 ALIGNMENT 36 YS2-20c12.q1k vc_5 258 223 1 36 C 36 100.00 261 reject_vc 13 ALIGNMENT 204 YS2-20c12.p1k vc_7 1 397 13918 14309 F 397 85.14 793 reject_vc 5 ALIGNMENT 210 YS2-20c12.p1k vc_2 397 1 1358 1749 C 397 85.89 793 reject_vc 1 ALIGNMENT 0 YS2-20c12.q1k vc_5 222 62 37 36 C 161 0.00 261 reject_vc 13 ALIGNMENT 210 YS2-20c12.p1k vc_1 397 1 1358 1749 C 397 85.89 793 reject_vc 0 ALIGNMENT 0 YS2-20c12.q1k vc_2 220 62 2146 2145 C 159 0.00 261 reject_vc 8 ALIGNMENT 317 YS2-20c16.p1k vc_7 1 607 456 1062 F 607 85.17 736 reject_vc 5 ALIGNMENT 0 YS2-20c16.q1k chrm 214 254 20689 20688 F 41 0.00 254 accept 0 ALIGNMENT 0 YS2-20c16.q1k vc_2 211 62 2148 2147 C 150 0.00 254 reject_low 9 ALIGNMENT 0 YS2-20c16.q1k vc_7 62 216 13525 13524 F 155 0.00 254 reject_low 13 ALIGNMENT 39 YS2-20c16.q1k vc_5 254 216 5025 5063 C 39 100.00 254 reject_low 12 ALIGNMENT 42 YS2-20c16.q1k vc_2 254 212 2105 2147 C 43 100.00 254 reject_low 9 ALIGNMENT 323 YS2-20c16.p1k vc_3 607 1 1143 1749 C 607 85.50 736 reject_vc 4 ALIGNMENT 0 YS2-20c16.q1k vc_5 215 62 37 36 C 154 0.00 254 reject_low 14 ALIGNMENT 0 YS2-20c16.q1k vc_3 211 62 2515 2514 C 150 0.00 254 reject_low 10 ALIGNMENT 42 YS2-20c16.q1k vc_3 254 212 2472 2514 C 43 100.00 254 reject_low 10 ALIGNMENT 38 YS2-20c16.q1k vc_7 217 254 13525 13562 F 38 100.00 254 reject_low 13 ALIGNMENT 326 YS2-20c16.p1k vc_5 607 1 4063 4669 C 607 85.67 736 reject_vc 1 ALIGNMENT 42 YS2-20c16.q1k vc_1 254 212 2472 2514 C 43 100.00 254 reject_low 8 ALIGNMENT 36 YS2-20c16.q1k vc_5 251 216 1 36 C 36 100.00 254 reject_low 14 ALIGNMENT 42 YS2-20c16.q1k vc_4 212 254 5829 5871 F 43 100.00 254 reject_low 11 ALIGNMENT 315 YS2-20c16.p1k vc_6 1 487 3712 4193 F 487 89.12 736 reject_vc 7 ALIGNMENT 317 YS2-20c16.p1k vc_7 1 607 13918 14524 F 607 85.17 736 reject_vc 6 ALIGNMENT 323 YS2-20c16.p1k vc_1 607 1 1143 1749 C 607 85.50 736 reject_vc 2 ALIGNMENT 0 YS2-20c16.q1k vc_4 62 211 5829 5828 F 150 0.00 254 reject_low 11 ALIGNMENT 0 YS2-20c16.q1k vc_5 215 62 5064 5063 C 154 0.00 254 reject_low 12 ALIGNMENT 158 YS2-20c16.q1k chrm 33 213 20509 20689 F 181 96.69 254 accept 0 ALIGNMENT 323 YS2-20c16.p1k vc_2 607 1 1143 1749 C 607 85.50 736 reject_vc 3 ALIGNMENT 0 YS2-20c16.q1k vc_1 211 62 2515 2514 C 150 0.00 254 reject_low 8 ALIGNMENT 991 YS2-20c17.q1k chr04 32 1165 1197992 1199126 F 1134 96.83 1167 accept 0 ALIGNMENT 964 YS2-20c17.p1k chr04 1252 41 1199807 1201020 C 1212 94.88 1329 accept 0 ALIGNMENT 976 YS2-20c20.p1k chr14 1205 35 309549 310727 C 1171 94.45 1354 accept 0 ALIGNMENT 946 YS2-20c20.q1k chr14 43 1111 306435 307510 F 1069 96.54 1172 accept 0 ALIGNMENT 41 YS2-20c21.q1k vc_3 525 485 2472 2512 C 41 100.00 525 reject_low 3 ALIGNMENT 0 YS2-20c21.q1k vc_5 486 62 37 36 C 425 0.00 525 reject_low 7 ALIGNMENT 0 YS2-20c21.q1k vc_3 484 62 2513 2512 C 423 0.00 525 reject_low 3 ALIGNMENT 0 YS2-20c21.q1k chr08 525 485 36551 36550 C 41 0.00 525 accept_chi 0 ALIGNMENT 41 YS2-20c21.q1k vc_1 525 485 2472 2512 C 41 100.00 525 reject_low 2 ALIGNMENT 0 YS2-20c21.q1k vc_1 484 62 2513 2512 C 423 0.00 525 reject_low 2 ALIGNMENT 436 YS2-20c21.p1k chr08 30 478 36550 36998 F 449 99.11 495 accept_chi 1 ALIGNMENT 36 YS2-20c21.q1k vc_5 522 487 1 36 C 36 100.00 525 reject_low 7 ALIGNMENT 39 YS2-20c21.q1k vc_5 525 487 5025 5063 C 39 100.00 525 reject_low 5 ALIGNMENT 0 YS2-20c21.q1k vc_7 62 487 13525 13524 F 426 0.00 525 reject_low 6 ALIGNMENT 0 YS2-20c21.q1k vc_4 62 484 5831 5830 F 423 0.00 525 reject_low 4 ALIGNMENT 438 YS2-20c21.q1k chr08 484 37 36550 36998 C 448 99.33 525 accept_chi 0 ALIGNMENT 0 YS2-20c21.q1k vc_5 486 62 5064 5063 C 425 0.00 525 reject_low 5 ALIGNMENT 41 YS2-20c21.q1k vc_4 485 525 5831 5871 F 41 100.00 525 reject_low 4 ALIGNMENT 0 YS2-20c21.p1k chr08 479 495 36998 36997 F 17 0.00 495 accept_chi 1 ALIGNMENT 38 YS2-20c21.q1k vc_7 488 525 13525 13562 F 38 100.00 525 reject_low 6 ALIGNMENT 0 YS2-20c22.q1k vc_1 540 62 2512 2511 C 479 0.00 580 reject_low 2 ALIGNMENT 469 YS2-20c22.q1k chr05 41 540 34140 34637 F 500 99.20 580 accept_chi 1 ALIGNMENT 0 YS2-20c22.q1k vc_5 541 62 5064 5063 C 480 0.00 580 reject_low 5 ALIGNMENT 40 YS2-20c22.q1k vc_4 541 580 5832 5871 F 40 100.00 580 reject_low 4 ALIGNMENT 0 YS2-20c22.q1k vc_4 62 540 5832 5831 F 479 0.00 580 reject_low 4 ALIGNMENT 0 YS2-20c22.q1k chr05 541 580 34637 34636 F 40 0.00 580 accept_chi 1 ALIGNMENT 40 YS2-20c22.q1k vc_1 580 541 2472 2511 C 40 100.00 580 reject_low 2 ALIGNMENT 0 YS2-20c22.q1k vc_7 62 542 63 62 F 481 0.00 580 reject_low 6 ALIGNMENT 0 YS2-20c22.q1k vc_5 541 62 37 36 C 480 0.00 580 reject_low 8 ALIGNMENT 0 YS2-20c22.q1k vc_3 540 62 2512 2511 C 479 0.00 580 reject_low 3 ALIGNMENT 38 YS2-20c22.q1k vc_7 543 580 63 100 F 38 100.00 580 reject_low 6 ALIGNMENT 40 YS2-20c22.q1k vc_3 580 541 2472 2511 C 40 100.00 580 reject_low 3 ALIGNMENT 0 YS2-20c22.q1k vc_7 62 542 13525 13524 F 481 0.00 580 reject_low 7 ALIGNMENT 36 YS2-20c22.q1k vc_5 577 542 1 36 C 36 100.00 580 reject_low 8 ALIGNMENT 38 YS2-20c22.q1k vc_7 543 580 13525 13562 F 38 100.00 580 reject_low 7 ALIGNMENT 39 YS2-20c22.q1k vc_5 580 542 5025 5063 C 39 100.00 580 reject_low 5 ALIGNMENT 0 YS2-20c22.p1k chr05 552 534 34137 34136 C 19 0.00 552 accept_chi 0 ALIGNMENT 477 YS2-20c22.p1k chr05 533 31 34136 34637 C 503 99.40 552 accept_chi 0 ALIGNMENT 1014 YS2-20c23.p1k chr11 1193 33 156728 157902 C 1161 96.90 1288 accept 0 ALIGNMENT 0 YS2-20c23.q1k chr08 160 62 201004 201003 C 99 0.00 1072 reject_low 1 ALIGNMENT 958 YS2-20c23.q1k chr11 25 1070 155830 156880 F 1046 97.71 1072 accept 0 ALIGNMENT 224 YS2-20c23.q1k chr08 1015 161 200147 201003 C 855 76.02 1072 reject_low 1 ALIGNMENT 967 YS2-20c24.q1k chr03 1100 40 63403 64459 C 1061 97.74 1114 accept_chi 0 ALIGNMENT 967 YS2-20c24.p1k chr03 34 1088 63404 64458 F 1055 97.63 1321 accept_chi 1 ALIGNMENT 81 YS2-20d02.q1k vc_3 1058 1180 2531 2655 F 123 89.43 1184 reject_low 6 ALIGNMENT 0 YS2-20d02.q1k vc_4 62 1057 126 125 F 996 0.00 1184 reject_low 7 ALIGNMENT 81 YS2-20d02.q1k vc_4 1058 1180 126 250 F 123 89.43 1184 reject_low 7 ALIGNMENT 31 YS2-20d02.q1k vc_5 1058 1025 5025 5058 C 34 97.06 1184 reject_low 14 ALIGNMENT 0 YS2-20d02.q1k vc_1 1017 62 2513 2512 C 956 0.00 1184 reject_low 11 ALIGNMENT 32 YS2-20d02.q1k vc_2 1058 1018 2105 2145 C 41 92.68 1184 reject_low 12 ALIGNMENT 32 YS2-20d02.q1k vc_1 1058 1018 2472 2512 C 41 92.68 1184 reject_low 11 ALIGNMENT 80 YS2-20d02.q1k vc_7 1184 1058 2598 2727 C 127 88.98 1184 reject_low 3 ALIGNMENT 81 YS2-20d02.q1k vc_1 1058 1180 2531 2655 F 123 89.43 1184 reject_low 4 ALIGNMENT 32 YS2-20d02.q1k vc_3 1058 1018 2472 2512 C 41 92.68 1184 reject_low 13 ALIGNMENT 0 YS2-20d02.q1k vc_2 1017 62 2146 2145 C 956 0.00 1184 reject_low 12 ALIGNMENT 80 YS2-20d02.q1k vc_4 1184 1058 5683 5812 C 127 88.98 1184 reject_low 2 ALIGNMENT 28 YS2-20d02.q1k vc_5 1055 1025 1 31 C 31 96.77 1184 reject_low 15 ALIGNMENT 81 YS2-20d02.q1k vc_2 1058 1180 2164 2288 F 123 89.43 1184 reject_low 5 ALIGNMENT 0 YS2-20d02.q1k vc_4 1057 62 1535 1534 C 996 0.00 1184 reject_low 10 ALIGNMENT 81 YS2-20d02.q1k vc_5 1058 1180 2398 2522 F 123 89.43 1184 reject_low 8 ALIGNMENT 0 YS2-20d02.q1k vc_5 62 1057 2398 2397 F 996 0.00 1184 reject_low 8 ALIGNMENT 0 YS2-20d02.q1k vc_3 62 1057 2531 2530 F 996 0.00 1184 reject_low 6 ALIGNMENT 0 YS2-20d02.q1k vc_4 62 1017 5831 5830 F 956 0.00 1184 reject_low 9 ALIGNMENT 0 YS2-20d02.q1k vc_5 1024 62 5059 5058 C 963 0.00 1184 reject_low 14 ALIGNMENT 81 YS2-20d02.q1k vc_4 1058 1180 6353 6477 F 123 89.43 1184|1,0 reject_low 9 ALIGNMENT 0 YS2-20d02.q1k vc_4 1057 62 5813 5812 C 996 0.00 1184 reject_low 2 ALIGNMENT 0 YS2-20d02.q1k vc_7 1057 62 2728 2727 C 996 0.00 1184 reject_low 3 ALIGNMENT 0 YS2-20d02.q1k vc_4 1059 1058 5872 6353 F 0 0.00 1184 reject_low 9 ALIGNMENT 0 YS2-20d02.q1k vc_5 1024 62 32 31 C 963 0.00 1184 reject_low 15 ALIGNMENT 0 YS2-20d02.q1k vc_2 62 1057 2164 2163 F 996 0.00 1184 reject_low 5 ALIGNMENT 931 YS2-20d02.q1k chr12 31 1017 513655 514644 F 987 98.38 1184 accept_chi 1 ALIGNMENT 0 YS2-20d02.q1k vc_3 1017 62 2513 2512 C 956 0.00 1184 reject_low 13 ALIGNMENT 70 YS2-20d02.q1k vc_4 1144 1058 1447 1534 C 87 94.25 1184 reject_low 10 ALIGNMENT 32 YS2-20d02.q1k vc_4 1018 1058 5831 5871 F 41 92.68 1184 reject_low 9 ALIGNMENT 0 YS2-20d02.q1k vc_1 62 1057 2531 2530 F 996 0.00 1184 reject_low 4 ALIGNMENT 932 YS2-20d02.p1k chr12 1017 33 513655 514644 C 985 98.38 1332 accept_chi 0 ALIGNMENT 1055 YS2-20d04.p1k chr06 29 1267 85324 86582 F 1239 96.21 1321 accept 0 ALIGNMENT 41 YS2-20d05.q1k vc_1 267 227 2472 2512 C 41 100.00 267 reject_low 1 ALIGNMENT 36 YS2-20d05.q1k vc_5 264 229 1 36 C 36 100.00 267 reject_low 6 ALIGNMENT 0 YS2-20d05.q1k vc_3 226 62 2513 2512 C 165 0.00 267 reject_low 2 ALIGNMENT 0 YS2-20d05.q1k vc_5 228 62 37 36 C 167 0.00 267 reject_low 6 ALIGNMENT 0 YS2-20d05.q1k vc_7 62 229 13525 13524 F 168 0.00 267 reject_low 5 ALIGNMENT 0 YS2-20d05.q1k vc_1 226 62 2513 2512 C 165 0.00 267 reject_low 1 ALIGNMENT 41 YS2-20d05.q1k vc_3 267 227 2472 2512 C 41 100.00 267 reject_low 2 ALIGNMENT 0 YS2-20d05.q1k chr10 267 227 327876 327875 C 41 0.00 267 accept 0 ALIGNMENT 182 YS2-20d05.q1k chr10 226 29 327875 328072 C 198 98.48 267 accept 0 ALIGNMENT 38 YS2-20d05.q1k vc_7 230 267 13525 13562 F 38 100.00 267 reject_low 5 ALIGNMENT 39 YS2-20d05.q1k vc_5 267 229 5025 5063 C 39 100.00 267 reject_low 4 ALIGNMENT 0 YS2-20d05.q1k vc_4 62 226 5831 5830 F 165 0.00 267 reject_low 3 ALIGNMENT 41 YS2-20d05.q1k vc_4 227 267 5831 5871 F 41 100.00 267 reject_low 3 ALIGNMENT 0 YS2-20d05.q1k vc_5 228 62 5064 5063 C 167 0.00 267 reject_low 4 ALIGNMENT 1003 YS2-20d06.q1k chr15 41 1152 94705 95816 F 1112 97.48 1214 accept 0 ALIGNMENT 1024 YS2-20d06.p1k chr15 1253 32 99536 100768 C 1222 95.25 1311 accept 0 ALIGNMENT 41 YS2-20d08.q1k vc_3 624 584 2472 2512 C 41 100.00 624 reject_low 3 ALIGNMENT 0 YS2-20d08.q1k vc_5 585 62 5064 5063 C 524 0.00 624 reject_low 5 ALIGNMENT 0 YS2-20d08.q1k vc_1 583 62 2513 2512 C 522 0.00 624 reject_low 2 ALIGNMENT 39 YS2-20d08.q1k vc_5 624 586 5025 5063 C 39 100.00 624 reject_low 5 ALIGNMENT 506 YS2-20d08.p1k chr16 568 27 797674 798214 C 542 99.26 586 accept_chi 0 ALIGNMENT 41 YS2-20d08.q1k vc_1 624 584 2472 2512 C 41 100.00 624 reject_low 2 ALIGNMENT 506 YS2-20d08.q1k chr16 42 583 797674 798214 F 542 99.26 624 accept_chi 1 ALIGNMENT 38 YS2-20d08.q1k vc_7 587 624 13525 13562 F 38 100.00 624 reject_low 6 ALIGNMENT 0 YS2-20d08.q1k vc_4 62 583 5831 5830 F 522 0.00 624 reject_low 4 ALIGNMENT 41 YS2-20d08.q1k vc_4 584 624 5831 5871 F 41 100.00 624 reject_low 4 ALIGNMENT 0 YS2-20d08.p1k chr16 586 569 797675 797674 C 18 0.00 586 accept_chi 0 ALIGNMENT 0 YS2-20d08.q1k vc_7 62 586 13525 13524 F 525 0.00 624 reject_low 6 ALIGNMENT 0 YS2-20d08.q1k chr16 584 624 798214 798213 F 41 0.00 624 accept_chi 1 ALIGNMENT 0 YS2-20d08.q1k vc_5 585 62 37 36 C 524 0.00 624 reject_low 7 ALIGNMENT 0 YS2-20d08.q1k vc_3 583 62 2513 2512 C 522 0.00 624 reject_low 3 ALIGNMENT 36 YS2-20d08.q1k vc_5 621 586 1 36 C 36 100.00 624 reject_low 7 ALIGNMENT 207 YS2-20d09.q1k chr04 285 35 945949 946197 C 251 95.62 1268 reject_low 13 ALIGNMENT 0 YS2-20d09.q1k chr07 288 417 712551 712550 F 130 0.00 1268 reject_low 3 ALIGNMENT 207 YS2-20d09.q1k chr07 35 285 736079 736327 F 251 95.62 1268 reject_low 14 ALIGNMENT 213 YS2-20d09.q1k chr07 35 287 712302 712551 F 253 96.44 1268 reject_low 3 ALIGNMENT 0 YS2-20d09.q1k chr09 298 417 210657 210656 F 120 0.00 1268 reject_low 1 ALIGNMENT 0 YS2-20d09.q1k chr16 286 417 856881 856880 F 132 0.00 1268 reject_low 12 ALIGNMENT 0 YS2-20d09.q1k chr04 288 417 668433 668432 F 130 0.00 1268 reject_low 9 ALIGNMENT 210 YS2-20d09.q1k chr05 285 35 492434 492682 C 251 96.02 1268 reject_low 11 ALIGNMENT 216 YS2-20d09.q1k chr09 35 297 210397 210657 F 263 95.82 1268 reject_low 1 ALIGNMENT 0 YS2-20d09.q1k chr05 417 286 492435 492434 C 132 0.00 1268 reject_low 11 ALIGNMENT 0 YS2-20d09.q1k chr07 417 286 319427 319426 C 132 0.00 1268 reject_low 16 ALIGNMENT 127 YS2-20d09.q1k chr03 151 285 168929 169063 F 135 99.26 1268|3,0 reject_low 20 ALIGNMENT 0 YS2-20d09.q1k chr07 286 417 707538 707537 F 132 0.00 1268 reject_low 7 ALIGNMENT 211 YS2-20d09.q1k chr01 35 285 182706 182953 F 251 96.41 1268 reject_low 6 ALIGNMENT 211 YS2-20d09.q1k chr09 35 285 205309 205556 F 251 96.41 1268 reject_low 8 ALIGNMENT 0 YS2-20d09.q1k chr03 154 153 168593 168931 F 0 0.00 1268 reject_low 20 ALIGNMENT 0 YS2-20d09.q1k chr15 288 417 854614 854613 F 130 0.00 1268 reject_low 15 ALIGNMENT 210 YS2-20d09.q1k chr05 285 35 249929 250177 C 251 96.02 1268 reject_low 10 ALIGNMENT 201 YS2-20d09.q1k chr08 285 35 146324 146572 C 251 94.82 1268 reject_low 18 ALIGNMENT 195 YS2-20d09.q1k chr04 35 285 1023223 1023471 F 251 94.02 1268 reject_low 19 ALIGNMENT 211 YS2-20d09.q1k chr07 35 285 707291 707538 F 251 96.41 1268 reject_low 7 ALIGNMENT 209 YS2-20d09.q1k chr04 35 287 668183 668433 F 253 95.65 1268 reject_low 9 ALIGNMENT 1064 YS2-20d09.p1k chr16 35 1255 558685 559919 F 1221 96.72 1362 accept 0 ALIGNMENT 0 YS2-20d09.q1k chr16 284 197 560303 560302 C 88 0.00 1268 accept 0 ALIGNMENT 0 YS2-20d09.q1k chr04 417 286 645236 645235 C 132 0.00 1268 reject_low 17 ALIGNMENT 0 YS2-20d09.q1k chr11 417 288 202289 202288 C 130 0.00 1268 reject_low 4 ALIGNMENT 205 YS2-20d09.q1k chr15 35 287 854365 854614 F 253 95.26 1268 reject_low 15 ALIGNMENT 93 YS2-20d09.q1k chr03 35 155 168476 168594 F 121 94.21 1268|0,2 reject_low 20 ALIGNMENT 210 YS2-20d09.q1k chr16 35 285 856633 856881 F 251 96.02 1268 reject_low 12 ALIGNMENT 201 YS2-20d09.q1k chr04 285 35 645235 645483 C 251 94.82 1268 reject_low 17 ALIGNMENT 218 YS2-20d09.q1k chr05 286 35 434626 434875 C 252 96.83 1268 reject_low 2 ALIGNMENT 0 YS2-20d09.q1k chr05 417 287 434627 434626 C 131 0.00 1268 reject_low 2 ALIGNMENT 282 YS2-20d09.q1k chr16 705 285 559893 560302 C 421 92.16 1268 accept 0 ALIGNMENT 0 YS2-20d09.q1k chr08 417 286 146325 146324 C 132 0.00 1268 reject_low 18 ALIGNMENT 0 YS2-20d09.q1k chr09 286 417 205556 205555 F 132 0.00 1268 reject_low 8 ALIGNMENT 0 YS2-20d09.q1k chr03 286 417 169063 169062 F 132 0.00 1268 reject_low 20 ALIGNMENT 202 YS2-20d09.q1k chr07 285 35 319426 319673 C 251 95.22 1268 reject_low 16 ALIGNMENT 0 YS2-20d09.q1k chr16 290 417 769661 769660 F 128 0.00 1268 reject_low 5 ALIGNMENT 0 YS2-20d09.q1k chr05 417 286 249930 249929 C 132 0.00 1268 reject_low 10 ALIGNMENT 206 YS2-20d09.q1k chr16 35 289 769409 769661 F 255 94.90 1268 reject_low 5 ALIGNMENT 213 YS2-20d09.q1k chr11 287 35 202288 202537 C 253 96.44 1268 reject_low 4 ALIGNMENT 0 YS2-20d09.q1k chr04 286 417 1023471 1023470 F 132 0.00 1268 reject_low 19 ALIGNMENT 0 YS2-20d09.q1k chr04 417 286 945950 945949 C 132 0.00 1268 reject_low 13 ALIGNMENT 0 YS2-20d09.q1k chr07 286 417 736327 736326 F 132 0.00 1268 reject_low 14 ALIGNMENT 0 YS2-20d09.q1k chr01 286 417 182953 182952 F 132 0.00 1268 reject_low 6 ALIGNMENT 41 YS2-20d11.q1k vc_1 254 214 2472 2512 C 41 100.00 254 reject_low 2 ALIGNMENT 41 YS2-20d11.q1k vc_4 214 254 5831 5871 F 41 100.00 254 reject_low 5 ALIGNMENT 39 YS2-20d11.q1k vc_5 254 216 5025 5063 C 39 100.00 254 reject_low 6 ALIGNMENT 175 YS2-20d11.p1k chr09 217 33 124124 124308 C 185 99.46 235 accept_chi 0 ALIGNMENT 38 YS2-20d11.q1k vc_7 217 254 13525 13562 F 38 100.00 254 reject_low 7 ALIGNMENT 0 YS2-20d11.p1k chr09 235 218 124125 124124 C 18 0.00 235 accept_chi 0 ALIGNMENT 0 YS2-20d11.q1k vc_3 213 62 2513 2512 C 152 0.00 254 reject_low 4 ALIGNMENT 0 YS2-20d11.q1k vc_5 215 62 5064 5063 C 154 0.00 254 reject_low 6 ALIGNMENT 0 YS2-20d11.q1k vc_1 213 62 2513 2512 C 152 0.00 254 reject_low 2 ALIGNMENT 0 YS2-20d11.q1k chr09 214 254 124308 124307 F 41 0.00 254 accept_chi 1 ALIGNMENT 0 YS2-20d11.q1k vc_7 62 216 13525 13524 F 155 0.00 254 reject_low 7 ALIGNMENT 36 YS2-20d11.q1k vc_5 251 216 1 36 C 36 100.00 254 reject_low 8 ALIGNMENT 0 YS2-20d11.q1k vc_4 62 213 5831 5830 F 152 0.00 254 reject_low 5 ALIGNMENT 162 YS2-20d11.q1k chr09 31 213 124124 124308 F 183 97.81 254 accept_chi 1 ALIGNMENT 0 YS2-20d11.q1k vc_2 213 62 2146 2145 C 152 0.00 254 reject_low 3 ALIGNMENT 41 YS2-20d11.q1k vc_2 254 214 2105 2145 C 41 100.00 254 reject_low 3 ALIGNMENT 0 YS2-20d11.q1k vc_5 215 62 37 36 C 154 0.00 254 reject_low 8 ALIGNMENT 41 YS2-20d11.q1k vc_3 254 214 2472 2512 C 41 100.00 254 reject_low 4 ALIGNMENT 1043 YS2-20d12.q1k chr10 31 1229 46346 47543 F 1199 97.16 1261 accept 0 ALIGNMENT 1018 YS2-20d12.p1k chr10 1201 41 49701 50866 C 1161 96.47 1342 accept 0 ALIGNMENT 40 YS2-20d13.q1k vc_4 535 574 5832 5871 F 40 100.00 574 reject_low 5 ALIGNMENT 40 YS2-20d13.q1k vc_3 574 535 2472 2511 C 40 100.00 574 reject_low 4 ALIGNMENT 0 YS2-20d13.q1k vc_4 62 534 5832 5831 F 473 0.00 574 reject_low 5 ALIGNMENT 0 YS2-20d13.q1k vc_5 535 62 37 36 C 474 0.00 574 reject_low 8 ALIGNMENT 0 YS2-20d13.q1k vc_2 534 62 2145 2144 C 473 0.00 574 reject_low 3 ALIGNMENT 0 YS2-20d13.q1k vc_1 534 62 2512 2511 C 473 0.00 574 reject_low 2 ALIGNMENT 36 YS2-20d13.q1k vc_5 571 536 1 36 C 36 100.00 574 reject_low 8 ALIGNMENT 0 YS2-20d13.q1k vc_7 62 536 13525 13524 F 475 0.00 574 reject_low 7 ALIGNMENT 0 YS2-20d13.q1k vc_5 535 62 5064 5063 C 474 0.00 574 reject_low 6 ALIGNMENT 39 YS2-20d13.q1k vc_5 574 536 5025 5063 C 39 100.00 574 reject_low 6 ALIGNMENT 0 YS2-20d13.q1k vc_3 534 62 2512 2511 C 473 0.00 574 reject_low 4 ALIGNMENT 40 YS2-20d13.q1k vc_1 574 535 2472 2511 C 40 100.00 574 reject_low 2 ALIGNMENT 479 YS2-20d13.p1k chr11 524 36 327677 328166 C 489 99.80 543 accept_chi 1 ALIGNMENT 0 YS2-20d13.p1k chr11 543 525 327678 327677 C 19 0.00 543 accept_chi 1 ALIGNMENT 0 YS2-20d13.q1k chr11 536 574 328171 328170 F 39 0.00 574 accept_chi 0 ALIGNMENT 38 YS2-20d13.q1k vc_7 537 574 13525 13562 F 38 100.00 574 reject_low 7 ALIGNMENT 483 YS2-20d13.q1k chr11 41 535 327677 328171 F 495 99.60 574 accept_chi 0 ALIGNMENT 40 YS2-20d13.q1k vc_2 574 535 2105 2144 C 40 100.00 574 reject_low 3 ALIGNMENT 40 YS2-20d14.q1k vc_3 572 533 2472 2511 C 40 100.00 572 reject_low 3 ALIGNMENT 40 YS2-20d14.q1k vc_1 572 533 2472 2511 C 40 100.00 572 reject_low 2 ALIGNMENT 40 YS2-20d14.q1k vc_4 533 572 5832 5871 F 40 100.00 572 reject_low 4 ALIGNMENT 39 YS2-20d14.q1k vc_5 572 534 5025 5063 C 39 100.00 572 reject_low 5 ALIGNMENT 0 YS2-20d14.q1k vc_7 62 534 13525 13524 F 473 0.00 572 reject_low 6 ALIGNMENT 0 YS2-20d14.q1k chr11 534 572 328171 328170 F 39 0.00 572 accept_chi 0 ALIGNMENT 0 YS2-20d14.q1k vc_5 533 62 5064 5063 C 472 0.00 572 reject_low 5 ALIGNMENT 36 YS2-20d14.q1k vc_5 569 534 1 36 C 36 100.00 572 reject_low 7 ALIGNMENT 0 YS2-20d14.q1k vc_1 532 62 2512 2511 C 471 0.00 572 reject_low 2 ALIGNMENT 0 YS2-20d14.q1k vc_5 533 62 37 36 C 472 0.00 572 reject_low 7 ALIGNMENT 481 YS2-20d14.p1k chr11 523 34 327677 328166 C 490 99.80 542 accept_chi 1 ALIGNMENT 0 YS2-20d14.p1k chr11 542 524 327678 327677 C 19 0.00 542 accept_chi 1 ALIGNMENT 483 YS2-20d14.q1k chr11 39 533 327677 328171 F 495 99.60 572 accept_chi 0 ALIGNMENT 0 YS2-20d14.q1k vc_3 532 62 2512 2511 C 471 0.00 572 reject_low 3 ALIGNMENT 0 YS2-20d14.q1k vc_4 62 532 5832 5831 F 471 0.00 572 reject_low 4 ALIGNMENT 38 YS2-20d14.q1k vc_7 535 572 13525 13562 F 38 100.00 572 reject_low 6 ALIGNMENT 873 YS2-20d15.p1k chr15 1083 38 52440 53499 C 1046 95.89 1257 accept 0 ALIGNMENT 945 YS2-20d15.q1k chr15 31 1138 48819 49927 F 1108 96.21 1210 accept 0 ALIGNMENT 166 YS2-20d16.q1k chr09 239 45 386320 386513 C 195 95.90 279 accept_chi 1 ALIGNMENT 0 YS2-20d16.p1k chr09 228 247 386518 386517 F 20 0.00 247 accept_chi 0 ALIGNMENT 38 YS2-20d16.q1k vc_7 242 279 13525 13562 F 38 100.00 279 reject_low 7 ALIGNMENT 0 YS2-20d16.q1k chr09 279 240 386321 386320 C 40 0.00 279 accept_chi 1 ALIGNMENT 0 YS2-20d16.q1k vc_7 62 241 13525 13524 F 180 0.00 279 reject_low 7 ALIGNMENT 0 YS2-20d16.q1k vc_4 62 238 5831 5830 F 177 0.00 279 reject_low 5 ALIGNMENT 41 YS2-20d16.q1k vc_4 239 279 5831 5871 F 41 100.00 279 reject_low 5 ALIGNMENT 41 YS2-20d16.q1k vc_2 279 239 2105 2145 C 41 100.00 279 reject_low 3 ALIGNMENT 0 YS2-20d16.q1k vc_5 240 62 37 36 C 179 0.00 279 reject_low 8 ALIGNMENT 0 YS2-20d16.q1k vc_5 240 62 5064 5063 C 179 0.00 279 reject_low 6 ALIGNMENT 170 YS2-20d16.p1k chr09 29 227 386320 386518 F 199 95.48 247 accept_chi 0 ALIGNMENT 0 YS2-20d16.q1k vc_3 238 62 2513 2512 C 177 0.00 279 reject_low 4 ALIGNMENT 41 YS2-20d16.q1k vc_1 279 239 2472 2512 C 41 100.00 279 reject_low 2 ALIGNMENT 41 YS2-20d16.q1k vc_3 279 239 2472 2512 C 41 100.00 279 reject_low 4 ALIGNMENT 0 YS2-20d16.q1k vc_2 238 62 2146 2145 C 177 0.00 279 reject_low 3 ALIGNMENT 0 YS2-20d16.q1k vc_1 238 62 2513 2512 C 177 0.00 279 reject_low 2 ALIGNMENT 39 YS2-20d16.q1k vc_5 279 241 5025 5063 C 39 100.00 279 reject_low 6 ALIGNMENT 36 YS2-20d16.q1k vc_5 276 241 1 36 C 36 100.00 279 reject_low 8 ALIGNMENT 889 YS2-20d17.p1k chr04 34 1070 898572 899608 F 1037 96.72 1380 accept 0 ALIGNMENT 984 YS2-20d17.q1k chr04 1209 32 898991 900172 C 1178 96.43 1209 accept 0 ALIGNMENT 0 YS2-20d19.p1k chrm 743 438 32233 32232 C 306 0.00 1328 reject_low 9 ALIGNMENT 0 YS2-20d19.p1k chrm 309 310 45056 45083 C 0 0.00 1328 reject_low 11 ALIGNMENT 0 YS2-20d19.p1k chrm 504 743 56898 56897 F 240 0.00 1328 reject_low 10 ALIGNMENT 0 YS2-20d19.q1k chrm 185 62 77100 77099 C 124 0.00 1146 reject_low 3 ALIGNMENT 113 YS2-20d19.q1k chr12 29 182 459715 459877 F 154 92.21 1146 reject_low 1 ALIGNMENT 76 YS2-20d19.q1k chr12 29 107 468852 468930 F 79 98.73 1146 reject_low 4 ALIGNMENT 0 YS2-20d19.q1k chr12 108 908 468930 468929 F 801 0.00 1146 reject_low 4 ALIGNMENT 0 YS2-20d19.p1k chrm 62 92 54493 54492 F 31 0.00 1328 reject_low 6 ALIGNMENT 0 YS2-20d19.q1k chr12 183 908 459877 459876 F 726 0.00 1146 reject_low 1 ALIGNMENT 0 YS2-20d19.p1k chrm 172 62 32497 32496 C 111 0.00 1328 reject_low 9 ALIGNMENT 104 YS2-20d19.p1k chrm 93 440 54493 54842 F 348 85.63 1328 reject_low 6 ALIGNMENT 83 YS2-20d19.p1k chrm 60 503 3907 4377 F 444 81.08 1328 reject_low 8 ALIGNMENT 594 YS2-20d19.q1k chrm 1146 225 12702 13630 C 922 96.96 1146 accept 0 ALIGNMENT 106 YS2-20d19.p1k chrm 440 83 82327 82681 C 358 85.20 1328 reject_low 5 ALIGNMENT 0 YS2-20d19.q1k chr12 123 908 489481 489480 F 786 0.00 1146 reject_low 2 ALIGNMENT 0 YS2-20d19.p1k chrm 743 503 30156 30155 C 241 0.00 1328 reject_low 7 ALIGNMENT 30 YS2-20d19.q1k chrm 236 186 77053 77099 C 51 90.20 1146 reject_low 3 ALIGNMENT 85 YS2-20d19.q1k chr12 29 122 489388 489481 F 94 96.81 1146 reject_low 2 ALIGNMENT 660 YS2-20d19.p1k chrm 29 1009 12373 13350 F 981 96.23 1328 accept 0 ALIGNMENT 120 YS2-20d19.p1k chrm 311 503 56703 56898 F 193 91.19 1328 reject_low 10 ALIGNMENT 95 YS2-20d19.p1k chrm 502 313 30155 30344 C 190 87.37 1328 reject_low 7 ALIGNMENT 62 YS2-20d19.p1k chrm 75 309 56444 56672 F 235 86.38 1328 reject_low 10 ALIGNMENT 0 YS2-20d19.p1k chrm 441 743 54842 54841 F 303 0.00 1328 reject_low 6 ALIGNMENT 0 YS2-20d19.q1k chrm 224 62 13631 13630 C 163 0.00 1146 accept 0 ALIGNMENT 0 YS2-20d19.p1k chrm 504 743 4377 4376 F 240 0.00 1328 reject_low 8 ALIGNMENT 0 YS2-20d19.p1k chrm 82 62 82682 82681 C 21 0.00 1328 reject_low 5 ALIGNMENT 0 YS2-20d19.p1k chrm 310 310 56673 56702 F 1 0.00 1328 reject_low 10 ALIGNMENT 83 YS2-20d19.p1k chrm 437 173 32232 32496 C 265 83.77 1328 reject_low 9 ALIGNMENT 0 YS2-20d19.p1k chrm 743 441 82328 82327 C 303 0.00 1328 reject_low 5 ALIGNMENT 0 YS2-20d19.p1k chrm 743 503 44862 44861 C 241 0.00 1328 reject_low 11 ALIGNMENT 0 YS2-20d19.p1k chrm 312 62 30345 30344 C 251 0.00 1328 reject_low 7 ALIGNMENT 38 YS2-20d19.p1k chrm 309 96 45084 45294 C 214 82.71 1328 reject_low 11 ALIGNMENT 0 YS2-20d19.p1k chrm 95 62 45295 45294 C 34 0.00 1328 reject_low 11 ALIGNMENT 0 YS2-20d19.q1k chrm 908 237 77054 77053 C 672 0.00 1146 reject_low 3 ALIGNMENT 113 YS2-20d19.p1k chrm 502 310 44861 45055 C 193 90.16 1328 reject_low 11 ALIGNMENT 1074 YS2-20d20.p1k chr04 25 1265 1382944 1384192 F 1241 95.89 1321 accept 0 ALIGNMENT 1047 YS2-20d20.q1k chr04 1171 37 1386006 1387140 C 1135 97.44 1176 accept 0 ALIGNMENT 33 YS2-20d21.q1k vc_1 1040 999 2472 2513 C 42 95.24 1102 reject_low 1 ALIGNMENT 0 YS2-20d21.q1k vc_1 998 62 2514 2513 C 937 0.00 1102 reject_low 1 ALIGNMENT 0 YS2-20d21.q1k vc_4 62 998 5830 5829 F 937 0.00 1102 reject_low 3 ALIGNMENT 33 YS2-20d21.q1k vc_4 999 1040 5830 5871 F 42 95.24 1102 reject_low 3 ALIGNMENT 0 YS2-20d21.q1k vc_5 991 62 5074 5073 C 930 0.00 1102 reject_low 4 ALIGNMENT 0 YS2-20d21.q1k vc_3 998 62 2514 2513 C 937 0.00 1102 reject_low 2 ALIGNMENT 28 YS2-20d21.q1k vc_5 1037 992 1 46 C 46 89.13 1102 reject_low 5 ALIGNMENT 29 YS2-20d21.q1k vc_7 1003 1040 13525 13562 F 38 94.74 1102 reject_low 6 ALIGNMENT 0 YS2-20d21.q1k vc_7 62 1002 13525 13524 F 941 0.00 1102 reject_low 6 ALIGNMENT 929 YS2-20d21.p1k chr05 23 998 458494 459470 F 976 98.98 1359 accept 0 ALIGNMENT 919 YS2-20d21.q1k chr05 999 30 458498 459471 C 970 98.97 1102 accept 0 ALIGNMENT 33 YS2-20d21.q1k vc_3 1040 999 2472 2513 C 42 95.24 1102 reject_low 2 ALIGNMENT 31 YS2-20d21.q1k vc_5 1040 992 5025 5073 C 49 89.80 1102 reject_low 4 ALIGNMENT 0 YS2-20d21.q1k vc_5 991 62 47 46 C 930 0.00 1102 reject_low 5 ALIGNMENT 0 YS2-20d22.q1k vc_5 655 62 5064 5063 C 594 0.00 694 reject_low 5 ALIGNMENT 0 YS2-20d22.q1k vc_4 62 654 5832 5831 F 593 0.00 694 reject_low 4 ALIGNMENT 596 YS2-20d22.p1k chr07 29 652 894861 895484 F 624 99.20 670 accept_chi 0 ALIGNMENT 596 YS2-20d22.q1k chr07 654 31 894861 895484 C 624 99.20 694 accept_chi 1 ALIGNMENT 36 YS2-20d22.q1k vc_5 691 656 1 36 C 36 100.00 694 reject_low 7 ALIGNMENT 40 YS2-20d22.q1k vc_3 694 655 2472 2511 C 40 100.00 694 reject_low 3 ALIGNMENT 0 YS2-20d22.p1k chr07 653 670 895484 895483 F 18 0.00 670 accept_chi 0 ALIGNMENT 40 YS2-20d22.q1k vc_4 655 694 5832 5871 F 40 100.00 694 reject_low 4 ALIGNMENT 40 YS2-20d22.q1k vc_1 694 655 2472 2511 C 40 100.00 694 reject_low 2 ALIGNMENT 0 YS2-20d22.q1k vc_3 654 62 2512 2511 C 593 0.00 694 reject_low 3 ALIGNMENT 0 YS2-20d22.q1k vc_5 655 62 37 36 C 594 0.00 694 reject_low 7 ALIGNMENT 0 YS2-20d22.q1k vc_7 62 656 13525 13524 F 595 0.00 694 reject_low 6 ALIGNMENT 0 YS2-20d22.q1k vc_1 654 62 2512 2511 C 593 0.00 694 reject_low 2 ALIGNMENT 39 YS2-20d22.q1k vc_5 694 656 5025 5063 C 39 100.00 694 reject_low 5 ALIGNMENT 0 YS2-20d22.q1k chr07 694 655 894862 894861 C 40 0.00 694 accept_chi 1 ALIGNMENT 38 YS2-20d22.q1k vc_7 657 694 13525 13562 F 38 100.00 694 reject_low 6 ALIGNMENT 632 YS2-20d23.p1k chr12 28 680 461078 461734 F 653 99.23 699 reject_low 2 ALIGNMENT 0 YS2-20d23.p1k chr12 681 699 452597 452596 F 19 0.00 699 accept 0 ALIGNMENT 0 YS2-20d23.p1k chr12 659 699 490543 490542 F 41 0.00 699 reject_low 4 ALIGNMENT 0 YS2-20d23.p1k chr12 681 699 461734 461733 F 19 0.00 699 reject_low 2 ALIGNMENT 650 YS2-20d23.q1k chr12 686 31 461078 461734 C 656 99.85 686 accept 0 ALIGNMENT 624 YS2-20d23.q1k chr12 686 52 489909 490543 C 635 99.53 686 reject_low 3 ALIGNMENT 632 YS2-20d23.p1k chr12 28 680 451941 452597 F 653 99.23 699 accept 0 ALIGNMENT 650 YS2-20d23.q1k chr12 686 31 451941 452597 C 656 99.85 686 reject_low 1 ALIGNMENT 602 YS2-20d23.p1k chr12 38 658 489921 490543 F 621 99.19 699 reject_low 4 ALIGNMENT 933 YS2-20d24.q1k chr15 1110 39 199599 200674 C 1072 97.67 1110 accept 0 ALIGNMENT 1050 YS2-20d24.p1k chr15 32 1299 198858 200130 F 1268 95.43 1349 accept 0 ALIGNMENT 654 YS2-20e01.p1k chr02 1128 335 724838 725625 C 794 95.34 1379 accept 0 ALIGNMENT 0 YS2-20e01.p1k chr16 821 336 178279 178278 C 486 0.00 1379 reject_low 1 ALIGNMENT 255 YS2-20e01.p1k chr16 335 49 178278 178564 C 287 98.26 1379 reject_low 1 ALIGNMENT 0 YS2-20e01.p1k chr02 334 62 725626 725625 C 273 0.00 1379 accept 0 ALIGNMENT 0 YS2-20e02.q1k chr14 349 62 494525 494524 C 288 0.00 1194 reject_low 1 ALIGNMENT 342 YS2-20e02.q1k chr14 917 350 493957 494524 C 568 87.15 1194 reject_low 1 ALIGNMENT 957 YS2-20e02.q1k chr09 1136 30 98321 99415 C 1107 97.20 1194 accept 0 ALIGNMENT 950 YS2-20e04.q1k chr04 41 1162 573500 574624 F 1122 95.90 1252 accept 0 ALIGNMENT 909 YS2-20e04.p1k chr04 1124 33 578132 579239 C 1092 95.79 1310 accept 0 ALIGNMENT 912 YS2-20e05.p1k chr10 1121 32 199625 200730 C 1090 96.61 1322 accept_trans 0 ALIGNMENT 942 YS2-20e05.q1k chr08 42 1157 87371 88481 F 1116 97.13 1248 reject_low 1 ALIGNMENT 965 YS2-20e05.q1k chr10 42 1179 199303 200433 F 1138 97.36 1248 accept_trans 0 ALIGNMENT 890 YS2-20e05.p1k chr16 32 1104 439847 440932 F 1073 96.27 1322 reject_low 2 ALIGNMENT 942 YS2-20e05.q1k chr16 1157 42 440164 441274 C 1116 97.13 1248 reject_low 2 ALIGNMENT 888 YS2-20e05.p1k chr08 1121 32 87693 88798 C 1090 95.87 1322 reject_low 1 ALIGNMENT 873 YS2-20e06.q1k chr10 41 1091 199298 200354 F 1051 96.38 1255 accept_trans 0 ALIGNMENT 855 YS2-20e06.q1k chr16 1091 41 440223 441279 C 1051 95.81 1255 reject_low 2 ALIGNMENT 697 YS2-20e06.p1k chr16 37 1043 439847 440847 F 1007 91.76 1378 reject_low 2 ALIGNMENT 855 YS2-20e06.q1k chr08 41 1091 87366 88422 F 1051 95.81 1255 reject_low 1 ALIGNMENT 720 YS2-20e06.p1k chr10 1043 37 199730 200730 C 1007 92.55 1378 accept_trans 0 ALIGNMENT 697 YS2-20e06.p1k chr08 1043 37 87798 88798 C 1007 91.76 1378 reject_low 1 ALIGNMENT 929 YS2-20e07.q1k chr15 52 1146 673075 674168 F 1095 96.44 1213 accept 0 ALIGNMENT 957 YS2-20e07.p1k chr15 1221 39 673430 674611 C 1183 95.35 1355 accept 0 ALIGNMENT 981 YS2-20e08.q1k chr15 52 1191 209153 210292 F 1140 95.70 1274 accept 0 ALIGNMENT 1038 YS2-20e08.p1k chr15 1206 35 212034 213227 C 1172 96.93 1357 accept 0 ALIGNMENT 946 YS2-20e09.p1k chr10 32 1218 486353 487544 F 1187 94.52 1338 accept 0 ALIGNMENT 996 YS2-20e09.q1k chr10 1192 30 486450 487613 C 1163 96.22 1205 accept 0 ALIGNMENT 39 YS2-20e10.p1k chrm 343 432 63 154 F 90 83.33 1387 reject_low 2 ALIGNMENT 0 YS2-20e10.p1k chrm 618 429 43078 43077 C 190 0.00 1387 reject_low 10 ALIGNMENT 37 YS2-20e10.p1k chrm 406 359 53828 53875 C 48 93.75 1387 reject_low 14 ALIGNMENT 0 YS2-20e10.p1k chrm 342 92 8300 8299 C 251 0.00 1387 reject_low 9 ALIGNMENT 38 YS2-20e10.p1k chrm 412 361 69049 69099 C 52 92.31 1387 reject_low 8 ALIGNMENT 0 YS2-20e10.p1k chrm 365 92 46357 46356 C 274 0.00 1387 reject_low 19 ALIGNMENT 0 YS2-20e10.p1k chrm 618 407 53829 53828 C 212 0.00 1387 reject_low 14 ALIGNMENT 26 YS2-20e10.q1k chrm 910 944 62861 62895 F 35 94.29 1286 reject_low 6,7,8 ALIGNMENT 0 YS2-20e10.p1k chrm 618 408 10395 10394 C 211 0.00 1387 reject_low 18 ALIGNMENT 38 YS2-20e10.p1k chrm 365 412 47474 47521 F 48 93.75 1387 reject_low 15 ALIGNMENT 40 YS2-20e10.p1k chrm 408 353 64516 64571 C 56 91.07 1387 reject_low 6 ALIGNMENT 34 YS2-20e10.p1k chrm 408 366 62861 62903 C 43 95.35 1387 reject_low 20 ALIGNMENT 39 YS2-20e10.p1k chrm 427 366 2076 2136 C 62 88.71 1387 reject_low 11 ALIGNMENT 0 YS2-20e10.p1k chrm 352 92 64572 64571 C 261 0.00 1387 reject_low 6 ALIGNMENT 0 YS2-20e10.p1k chrm 365 92 2137 2136 C 274 0.00 1387 reject_low 11 ALIGNMENT 0 YS2-20e10.p1k chrm 618 428 2077 2076 C 191 0.00 1387 reject_low 11 ALIGNMENT 0 YS2-20e10.p1k chrm 558 171 80023 80164 C 388 0.00 1387 reject_bad_break 0 ALIGNMENT 38 YS2-20e10.p1k chrm 417 366 48093 48143 C 52 92.31 1387 reject_low 12 ALIGNMENT 34 YS2-20e10.p1k chrm 407 361 10394 10439 C 47 93.62 1387 reject_low 18 ALIGNMENT 0 YS2-20e10.p1k chrm 409 618 12311 12310 F 210 0.00 1387 reject_low 4 ALIGNMENT 0 YS2-20e10.p1k chrm 92 358 4530 4529 F 267 0.00 1387 reject_low 3 ALIGNMENT 47 YS2-20e10.p1k chrm 432 343 8211 8299 C 90 85.56 1387 reject_low 9 ALIGNMENT 47 YS2-20e10.p1k chrm 359 432 4530 4602 F 74 89.19 1387 reject_low 3 ALIGNMENT 40 YS2-20e10.p1k chrm 363 412 2749 2798 F 50 94.00 1387 reject_low 5 ALIGNMENT 0 YS2-20e10.p1k chrm 618 409 64517 64516 C 210 0.00 1387 reject_low 6 ALIGNMENT 30 YS2-20e10.q1k chrm 957 910 12265 12311 C 48 89.58 1286 reject_low 2,3,4,5 ALIGNMENT 0 YS2-20e10.p1k chrm 364 92 10789 10788 C 273 0.00 1387 reject_low 17 ALIGNMENT 0 YS2-20e10.p1k chrm 360 92 69100 69099 C 269 0.00 1387 reject_low 8 ALIGNMENT 36 YS2-20e10.p1k chrm 363 407 57027 57071 F 45 95.56 1387 reject_low 16 ALIGNMENT 40 YS2-20e10.p1k chrm 408 361 34286 34333 C 48 95.83 1387 reject_low 13 ALIGNMENT 0 YS2-20e10.q1k chrm 885 62 155 154 C 824 0.00 1286 reject_low 1 ALIGNMENT 0 YS2-20e10.p1k chrm 433 618 4602 4601 F 186 0.00 1387 reject_low 3 ALIGNMENT 0 YS2-20e10.p1k chrm 618 409 34287 34286 C 210 0.00 1387 reject_low 13 ALIGNMENT 0 YS2-20e10.q1k chrm 62 909 62861 62860 F 848 0.00 1286 reject_low 6,7,8 ALIGNMENT 0 YS2-20e10.p1k chrm 618 418 48094 48093 C 201 0.00 1387 reject_low 12 ALIGNMENT 40 YS2-20e10.p1k chrm 413 364 69438 69487 C 50 94.00 1387 reject_low 7 ALIGNMENT 0 YS2-20e10.p1k chrm 360 92 10440 10439 C 269 0.00 1387 reject_low 18 ALIGNMENT 0 YS2-20e10.p1k chrm 142 92 80193 80192 C 51 0.00 1387 reject_bad_break 0 ALIGNMENT 34 YS2-20e10.p1k chrm 408 366 46314 46356 C 43 95.35 1387 reject_low 19 ALIGNMENT 36 YS2-20e10.p1k chrm 408 365 10745 10788 C 44 95.45 1387 reject_low 17 ALIGNMENT 0 YS2-20e10.p1k chrm 363 92 69488 69487 C 272 0.00 1387 reject_low 7 ALIGNMENT 0 YS2-20e10.p1k chrm 618 414 69439 69438 C 205 0.00 1387 reject_low 7 ALIGNMENT 0 YS2-20e10.p1k chrm 618 433 8212 8211 C 186 0.00 1387 reject_low 9 ALIGNMENT 0 YS2-20e10.p1k chrm 92 362 2749 2748 F 271 0.00 1387 reject_low 5 ALIGNMENT 0 YS2-20e10.q1k chrm 760 837 80022 80021 F 78 0.00 1286 reject_bad_break 0 ALIGNMENT 0 YS2-20e10.p1k chrm 618 409 62862 62861 C 210 0.00 1387 reject_low 20 ALIGNMENT 293 YS2-20e10.p1k chrm 1102 559 79477 80022 C 544 87.87 1387 reject_bad_break 0 ALIGNMENT 0 YS2-20e10.p1k chrm 365 92 48144 48143 C 274 0.00 1387 reject_low 12 ALIGNMENT 644 YS2-20e10.q1k chrm 38 759 79301 80022 F 722 99.03 1286 reject_bad_break 0 ALIGNMENT 0 YS2-20e10.q1k chrm 909 62 12312 12311 C 848 0.00 1286 reject_low 2,3,4,5 ALIGNMENT 0 YS2-20e10.p1k chrm 433 618 154 153 F 186 0.00 1387 reject_low 2 ALIGNMENT 0 YS2-20e10.p1k chrm 618 413 69050 69049 C 206 0.00 1387 reject_low 8 ALIGNMENT 25 YS2-20e10.p1k chrm 170 143 80165 80192 C 28 96.43 1387 reject_bad_break 0 ALIGNMENT 0 YS2-20e10.p1k chrm 92 358 12262 12261 F 267 0.00 1387 reject_low 4 ALIGNMENT 44 YS2-20e10.p1k chrm 428 348 43077 43157 C 81 86.42 1387 reject_low 10 ALIGNMENT 0 YS2-20e10.p1k chrm 618 409 10746 10745 C 210 0.00 1387 reject_low 17 ALIGNMENT 0 YS2-20e10.p1k chrm 408 618 57071 57070 F 211 0.00 1387 reject_low 16 ALIGNMENT 43 YS2-20e10.p1k chrm 359 408 12262 12311 F 50 96.00 1387 reject_low 4 ALIGNMENT 0 YS2-20e10.p1k chrm 360 92 34334 34333 C 269 0.00 1387 reject_low 13 ALIGNMENT 0 YS2-20e10.p1k chrm 365 92 62904 62903 C 274 0.00 1387 reject_low 20 ALIGNMENT 0 YS2-20e10.p1k chrm 92 364 47474 47473 F 273 0.00 1387 reject_low 15 ALIGNMENT 0 YS2-20e10.p1k chrm 92 362 57027 57026 F 271 0.00 1387 reject_low 16 ALIGNMENT 0 YS2-20e10.p1k chrm 618 409 46315 46314 C 210 0.00 1387 reject_low 19 ALIGNMENT 0 YS2-20e10.p1k chrm 347 92 43158 43157 C 256 0.00 1387 reject_low 10 ALIGNMENT 0 YS2-20e10.p1k chrm 92 342 63 62 F 251 0.00 1387 reject_low 2 ALIGNMENT 0 YS2-20e10.p1k chrm 413 618 2798 2797 F 206 0.00 1387 reject_low 5 ALIGNMENT 0 YS2-20e10.p1k chrm 358 92 53876 53875 C 267 0.00 1387 reject_low 14 ALIGNMENT 0 YS2-20e10.p1k chrm 413 618 47521 47520 F 206 0.00 1387 reject_low 15 ALIGNMENT 29 YS2-20e10.q1k chrm 976 886 64 154 C 91 81.32 1286 reject_low 1 ALIGNMENT 0 YS2-20e11.q1k vc_4 62 507 5831 5830 F 446 0.00 548 reject_low 3 ALIGNMENT 0 YS2-20e11.q1k chr10 548 509 149957 149956 C 40 0.00 548 accept_chi 0 ALIGNMENT 39 YS2-20e11.q1k vc_5 548 510 5025 5063 C 39 100.00 548 reject_low 5 ALIGNMENT 446 YS2-20e11.q1k chr10 508 46 149956 150418 C 463 99.35 548 accept_chi 0 ALIGNMENT 0 YS2-20e11.p1k chr14 143 62 70067 70066 C 82 0.00 518 reject_low 8 ALIGNMENT 36 YS2-20e11.q1k vc_5 545 510 1 36 C 36 100.00 548 reject_low 7 ALIGNMENT 21 YS2-20e11.q1k chr14 366 401 70031 70066 F 36 94.44 548 reject_low 4 ALIGNMENT 0 YS2-20e11.q1k vc_5 509 62 5064 5063 C 448 0.00 548 reject_low 5 ALIGNMENT 41 YS2-20e11.q1k vc_4 508 548 5831 5871 F 41 100.00 548 reject_low 3 ALIGNMENT 38 YS2-20e11.q1k vc_7 511 548 13525 13562 F 38 100.00 548 reject_low 6 ALIGNMENT 21 YS2-20e11.p1k chr14 179 144 70031 70066 C 36 94.44 518 reject_low 8 ALIGNMENT 435 YS2-20e11.p1k chr10 38 499 149956 150418 F 462 98.70 518 accept_chi 1 ALIGNMENT 41 YS2-20e11.q1k vc_1 548 508 2472 2512 C 41 100.00 548 reject_low 2 ALIGNMENT 0 YS2-20e11.q1k vc_1 507 62 2513 2512 C 446 0.00 548 reject_low 2 ALIGNMENT 0 YS2-20e11.p1k chr14 518 180 70032 70031 C 339 0.00 518 reject_low 8 ALIGNMENT 0 YS2-20e11.p1k chr10 500 518 150418 150417 F 19 0.00 518 accept_chi 1 ALIGNMENT 0 YS2-20e11.q1k chr14 402 548 70066 70065 F 147 0.00 548 reject_low 4 ALIGNMENT 0 YS2-20e11.p1k chr11 62 144 381287 381286 F 83 0.00 518 reject_low 9 ALIGNMENT 20 YS2-20e11.p1k chr11 145 176 381287 381318 F 32 96.88 518 reject_low 9 ALIGNMENT 0 YS2-20e11.q1k chr14 62 365 70031 70030 F 304 0.00 548 reject_low 4 ALIGNMENT 0 YS2-20e11.q1k vc_7 62 510 13525 13524 F 449 0.00 548 reject_low 6 ALIGNMENT 0 YS2-20e11.q1k vc_5 509 62 37 36 C 448 0.00 548 reject_low 7 ALIGNMENT 0 YS2-20e11.p1k chr11 177 518 381318 381317 F 342 0.00 518 reject_low 9 ALIGNMENT 1004 YS2-20e12.p1k chr10 1240 38 304427 305636 C 1203 95.76 1397 accept 0 ALIGNMENT 955 YS2-20e12.q1k chr10 32 1143 301672 302769 F 1112 97.39 1266 accept 0 ALIGNMENT 954 YS2-20e13.q1k chr10 53 1167 349209 350326 F 1115 95.96 1236 accept_chi 0 ALIGNMENT 580 YS2-20e13.p1k vc_6 654 37 5263 5882 C 618 99.35 1302 reject_low 2 ALIGNMENT 0 YS2-20e13.p1k vc_6 872 655 5264 5263 C 218 0.00 1302 reject_low 2 ALIGNMENT 1004 YS2-20e13.p1k scplasm1 1198 37 5021 6189 C 1162 96.99 1302 accept_chi 1 ALIGNMENT 1024 YS2-20e14.q1k chr12 1148 30 466488 467610 C 1119 97.86 1262 accept 1 ALIGNMENT 1024 YS2-20e14.p1k chr12 43 1191 453001 454164 F 1149 96.61 1321 accept 0 ALIGNMENT 1024 YS2-20e14.p1k chr12 43 1191 462138 463301 F 1149 96.61 1321 accept 1 ALIGNMENT 1024 YS2-20e14.q1k chr12 1148 30 457351 458473 C 1119 97.86 1262 accept 0 ALIGNMENT 1039 YS2-20e15.q1k chr12 49 1190 462604 463743 F 1142 97.37 1193 accept 1 ALIGNMENT 1004 YS2-20e15.p1k chr12 1203 31 466548 467706 C 1173 96.68 1354 accept 1 ALIGNMENT 1039 YS2-20e15.q1k chr12 49 1190 453467 454606 F 1142 97.37 1193 accept 0 ALIGNMENT 1004 YS2-20e15.p1k chr12 1203 31 457411 458569 C 1173 96.68 1354 accept 0 ALIGNMENT 0 YS2-20e16.p1k chr14 501 519 561825 561824 F 19 0.00 519 reject_low 21 ALIGNMENT 203 YS2-20e16.p1k chr05 500 283 354509 354726 C 218 99.08 519 reject_low 24 ALIGNMENT 0 YS2-20e16.p1k chr13 501 519 503987 503986 F 19 0.00 519 reject_low 12 ALIGNMENT 0 YS2-20e16.q1k chr12 62 250 784272 784271 F 189 0.00 545 accept_chi 0 ALIGNMENT 0 YS2-20e16.p1k chr16 519 501 442893 442892 C 19 0.00 519 reject_low 6 ALIGNMENT 0 YS2-20e16.p1k chr02 282 62 36219 36218 C 221 0.00 519 reject_low 9 ALIGNMENT 197 YS2-20e16.p1k chr07 283 500 110859 111076 F 218 98.17 519 reject_low 29 ALIGNMENT 207 YS2-20e16.p1k chr14 500 282 632274 632492 C 219 99.54 519 reject_low 17 ALIGNMENT 0 YS2-20e16.q1k chr04 545 251 437147 437146 C 295 0.00 545 reject_low 34 ALIGNMENT 0 YS2-20e16.p1k chr07 280 62 931546 931545 C 219 0.00 519 reject_low 35 ALIGNMENT 148 YS2-20e16.p1k chr14 274 441 96442 96609 F 168 97.02 519 reject_low 37 ALIGNMENT 0 YS2-20e16.p1k chr12 519 283 784273 784272 C 237 0.00 519 accept_chi 1 ALIGNMENT 209 YS2-20e16.p1k chr10 283 500 203319 203536 F 218 100.00 519 reject_low 11 ALIGNMENT 0 YS2-20e16.p1k chr13 62 282 503770 503769 F 221 0.00 519 reject_low 12 ALIGNMENT 209 YS2-20e16.p1k chr10 283 500 197464 197681 F 218 100.00 519 reject_low 4 ALIGNMENT 0 YS2-20e16.q1k chr04 332 62 1150934 1150933 C 271 0.00 545 reject_low 3 ALIGNMENT 209 YS2-20e16.p1k chr13 283 500 503770 503987 F 218 100.00 519 reject_low 12 ALIGNMENT 203 YS2-20e16.q1k chr02 33 250 643636 643853 F 218 99.08 545 reject_low 26 ALIGNMENT 208 YS2-20e16.q1k chr16 33 252 442892 443111 F 220 99.55 545 reject_low 8 ALIGNMENT 206 YS2-20e16.p1k chr16 500 283 437040 437257 C 218 99.54 519 reject_low 20 ALIGNMENT 203 YS2-20e16.q1k chr05 33 250 354509 354726 F 218 99.08 545 reject_low 27 ALIGNMENT 184 YS2-20e16.q1k chr07 33 252 931326 931545 F 220 95.91 545 reject_low 36 ALIGNMENT 0 YS2-20e16.q1k chr15 545 251 703774 703773 C 295 0.00 545 reject_low 32 ALIGNMENT 0 YS2-20e16.q1k chr02 251 545 36218 36217 F 295 0.00 545 reject_low 13 ALIGNMENT 205 YS2-20e16.q1k chr08 255 33 85530 85752 C 223 98.65 545 reject_low 7 ALIGNMENT 0 YS2-20e16.q1k chr16 253 545 443111 443110 F 293 0.00 545 reject_low 8 ALIGNMENT 0 YS2-20e16.q1k chr07 545 251 110860 110859 C 295 0.00 545 reject_low 31 ALIGNMENT 0 YS2-20e16.p1k chr07 62 282 110859 110858 F 221 0.00 519 reject_low 29 ALIGNMENT 209 YS2-20e16.q1k chr09 33 250 196803 197020 F 218 100.00 545 reject_low 14 ALIGNMENT 0 YS2-20e16.p1k chr09 519 501 196804 196803 C 19 0.00 519 reject_low 10 ALIGNMENT 0 YS2-20e16.q1k chr13 545 251 503771 503770 C 295 0.00 545 reject_low 16 ALIGNMENT 0 YS2-20e16.p1k chr04 62 282 437146 437145 F 221 0.00 519 reject_low 33 ALIGNMENT 206 YS2-20e16.q1k chr08 250 33 91387 91604 C 218 99.54 545 reject_low 5 ALIGNMENT 0 YS2-20e16.q1k chr14 91 62 96610 96609 C 30 0.00 545 reject_low 38 ALIGNMENT 0 YS2-20e16.q1k chr10 545 251 203320 203319 C 295 0.00 545 reject_low 4 ALIGNMENT 0 YS2-20e16.q1k chr05 251 545 354726 354725 F 295 0.00 545 reject_low 27 ALIGNMENT 0 YS2-20e16.p1k chr14 281 62 632493 632492 C 220 0.00 519 reject_low 17 ALIGNMENT 0 YS2-20e16.p1k chr04 501 519 437363 437362 F 19 0.00 519 reject_low 33 ALIGNMENT 0 YS2-20e16.q1k chr13 251 545 808905 808904 F 295 0.00 545 reject_low 28 ALIGNMENT 0 YS2-20e16.p1k chr16 282 62 437258 437257 C 221 0.00 519 reject_low 20 ALIGNMENT 0 YS2-20e16.q1k chr10 545 251 197465 197464 C 295 0.00 545 reject_low 15 ALIGNMENT 201 YS2-20e16.p1k chr14 279 500 561604 561825 F 222 98.20 519 reject_low 21 ALIGNMENT 0 YS2-20e16.p1k chr13 282 62 808906 808905 C 221 0.00 519 reject_low 25 ALIGNMENT 203 YS2-20e16.p1k chr13 500 283 808688 808905 C 218 99.08 519 reject_low 25 ALIGNMENT 209 YS2-20e16.q1k chr13 250 33 503770 503987 C 218 100.00 545 reject_low 16 ALIGNMENT 0 YS2-20e16.p1k chr15 62 282 703773 703772 F 221 0.00 519 reject_low 30 ALIGNMENT 201 YS2-20e16.q1k chr14 254 33 561604 561825 C 222 98.20 545 reject_low 22 ALIGNMENT 0 YS2-20e16.p1k chr04 62 98 1150833 1150832 F 37 0.00 519 reject_low 2 ALIGNMENT 0 YS2-20e16.q1k chr08 545 251 91388 91387 C 295 0.00 545 reject_low 5 ALIGNMENT 209 YS2-20e16.q1k chr10 250 33 197464 197681 C 218 100.00 545 reject_low 15 ALIGNMENT 197 YS2-20e16.q1k chr15 250 33 703773 703990 C 218 98.17 545 reject_low 32 ALIGNMENT 209 YS2-20e16.q1k chr10 250 33 203319 203536 C 218 100.00 545 reject_low 4 ALIGNMENT 203 YS2-20e16.q1k chr13 33 250 808688 808905 F 218 99.08 545 reject_low 28 ALIGNMENT 0 YS2-20e16.p1k chr05 282 62 354727 354726 C 221 0.00 519 reject_low 24 ALIGNMENT 0 YS2-20e16.p1k chr08 62 282 91387 91386 F 221 0.00 519 reject_low 19 ALIGNMENT 208 YS2-20e16.p1k chr16 500 281 442892 443111 C 220 99.55 519 reject_low 6 ALIGNMENT 0 YS2-20e16.p1k chr16 519 501 437041 437040 C 19 0.00 519 reject_low 20 ALIGNMENT 188 YS2-20e16.q1k chr04 250 33 437146 437363 C 218 96.79 545 reject_low 34 ALIGNMENT 0 YS2-20e16.p1k chr08 501 519 85752 85751 F 19 0.00 519 reject_low 5 ALIGNMENT 238 YS2-20e16.q1k chr12 251 504 784272 784524 F 254 98.43 545 accept_chi 0 ALIGNMENT 209 YS2-20e16.p1k chr09 500 283 196803 197020 C 218 100.00 519 reject_low 10 ALIGNMENT 188 YS2-20e16.p1k chr04 283 500 437146 437363 F 218 96.79 519 reject_low 33 ALIGNMENT 0 YS2-20e16.p1k chr14 442 519 96609 96608 F 78 0.00 519 reject_low 37 ALIGNMENT 197 YS2-20e16.q1k chr07 250 33 110859 111076 C 218 98.17 545 reject_low 31 ALIGNMENT 0 YS2-20e16.p1k chr08 62 277 85530 85529 F 216 0.00 519 reject_low 5 ALIGNMENT 0 YS2-20e16.p1k chr09 282 62 197021 197020 C 221 0.00 519 reject_low 10 ALIGNMENT 203 YS2-20e16.p1k chr02 500 283 643636 643853 C 218 99.08 519 reject_low 23 ALIGNMENT 0 YS2-20e16.q1k chr04 545 435 1150834 1150833 C 111 0.00 545 reject_low 3 ALIGNMENT 0 YS2-20e16.q1k chr16 251 545 437257 437256 F 295 0.00 545 reject_low 6 ALIGNMENT 0 YS2-20e16.p1k chr08 501 519 91604 91603 F 19 0.00 519 reject_low 19 ALIGNMENT 0 YS2-20e16.p1k chr16 280 62 443112 443111 C 219 0.00 519 reject_low 6 ALIGNMENT 0 YS2-20e16.q1k chr09 251 545 197020 197019 F 295 0.00 545 reject_low 14 ALIGNMENT 0 YS2-20e16.q1k chr08 545 256 85531 85530 C 290 0.00 545 reject_low 7 ALIGNMENT 0 YS2-20e16.p1k chr07 519 501 931327 931326 C 19 0.00 519 reject_low 35 ALIGNMENT 0 YS2-20e16.p1k chr05 519 501 354510 354509 C 19 0.00 519 reject_low 24 ALIGNMENT 0 YS2-20e16.p1k chr10 62 282 197464 197463 F 221 0.00 519 reject_low 4 ALIGNMENT 0 YS2-20e16.p1k chr14 62 278 561604 561603 F 217 0.00 519 reject_low 21 ALIGNMENT 0 YS2-20e16.q1k chr02 251 545 643853 643852 F 295 0.00 545 reject_low 26 ALIGNMENT 0 YS2-20e16.p1k chr15 501 519 703990 703989 F 19 0.00 519 reject_low 30 ALIGNMENT 197 YS2-20e16.p1k chr15 283 500 703773 703990 F 218 98.17 519 reject_low 30 ALIGNMENT 0 YS2-20e16.q1k chr14 252 545 632492 632491 F 294 0.00 545 reject_low 18 ALIGNMENT 209 YS2-20e16.p1k chr02 500 283 36001 36218 C 218 100.00 519 reject_low 9 ALIGNMENT 0 YS2-20e16.p1k chr14 519 501 632275 632274 C 19 0.00 519 reject_low 17 ALIGNMENT 0 YS2-20e16.q1k chr12 505 545 784524 784523 F 41 0.00 545 accept_chi 0 ALIGNMENT 0 YS2-20e16.p1k chr04 201 519 1150933 1150932 F 319 0.00 519 reject_low 2 ALIGNMENT 0 YS2-20e16.p1k chr02 282 62 643854 643853 C 221 0.00 519 reject_low 23 ALIGNMENT 0 YS2-20e16.p1k chr10 501 519 197681 197680 F 19 0.00 519 reject_low 4 ALIGNMENT 0 YS2-20e16.p1k chr13 519 501 808689 808688 C 19 0.00 519 reject_low 25 ALIGNMENT 0 YS2-20e16.q1k chr14 545 260 96443 96442 C 286 0.00 545 reject_low 38 ALIGNMENT 0 YS2-20e16.p1k chr02 519 501 643637 643636 C 19 0.00 519 reject_low 23 ALIGNMENT 184 YS2-20e16.p1k chr07 500 281 931326 931545 C 220 95.91 519 reject_low 35 ALIGNMENT 206 YS2-20e16.p1k chr08 283 500 91387 91604 F 218 99.54 519 reject_low 19 ALIGNMENT 148 YS2-20e16.q1k chr14 259 92 96442 96609 C 168 97.02 545 reject_low 38 ALIGNMENT 0 YS2-20e16.p1k chr10 501 519 203536 203535 F 19 0.00 519 reject_low 11 ALIGNMENT 234 YS2-20e16.p1k chr12 282 30 784272 784523 C 253 98.02 519 accept_chi 1 ALIGNMENT 205 YS2-20e16.p1k chr08 278 500 85530 85752 F 223 98.65 519 reject_low 5 ALIGNMENT 0 YS2-20e16.p1k chr07 501 519 111076 111075 F 19 0.00 519 reject_low 29 ALIGNMENT 209 YS2-20e16.q1k chr02 33 250 36001 36218 F 218 100.00 545 reject_low 13 ALIGNMENT 0 YS2-20e16.p1k chr02 519 501 36002 36001 C 19 0.00 519 reject_low 9 ALIGNMENT 0 YS2-20e16.q1k chr07 253 545 931545 931544 F 293 0.00 545 reject_low 36 ALIGNMENT 207 YS2-20e16.q1k chr14 33 251 632274 632492 F 219 99.54 545 reject_low 18 ALIGNMENT 0 YS2-20e16.p1k chr14 62 273 96442 96441 F 212 0.00 519 reject_low 37 ALIGNMENT 0 YS2-20e16.q1k chr14 545 255 561605 561604 C 291 0.00 545 reject_low 22 ALIGNMENT 97 YS2-20e16.q1k chr04 434 333 1150833 1150933 C 102 99.02 545 reject_low 3 ALIGNMENT 206 YS2-20e16.q1k chr16 33 250 437040 437257 F 218 99.54 545 reject_low 6 ALIGNMENT 97 YS2-20e16.p1k chr04 99 200 1150833 1150933 F 102 99.02 519 reject_low 2 ALIGNMENT 0 YS2-20e16.p1k chr10 62 282 203319 203318 F 221 0.00 519 reject_low 11 ALIGNMENT 0 YS2-20e17.q1k vc_1 211 62 2513 2512 C 150 0.00 252 reject_low 8 ALIGNMENT 41 YS2-20e17.q1k vc_4 212 252 5831 5871 F 41 100.00 252 reject_low 11 ALIGNMENT 41 YS2-20e17.q1k vc_1 252 212 2472 2512 C 41 100.00 252 reject_low 8 ALIGNMENT 0 YS2-20e17.q1k vc_5 213 62 37 36 C 152 0.00 252 reject_low 14 ALIGNMENT 408 YS2-20e17.p1k vc_3 614 1 1142 1749 C 614 90.23 786 reject_vc 5 ALIGNMENT 36 YS2-20e17.q1k vc_5 249 214 1 36 C 36 100.00 252 reject_low 14 ALIGNMENT 411 YS2-20e17.p1k vc_5 614 1 4062 4669 C 614 90.39 786 reject_vc 1 ALIGNMENT 0 YS2-20e17.q1k chr15 252 213 34086 34085 C 40 0.00 252 accept 0 ALIGNMENT 411 YS2-20e17.p1k vc_6 1 614 3712 4319 F 614 90.39 786 reject_vc 2 ALIGNMENT 39 YS2-20e17.q1k vc_5 252 214 5025 5063 C 39 100.00 252 reject_low 12 ALIGNMENT 0 YS2-20e17.q1k vc_2 211 62 2146 2145 C 150 0.00 252 reject_low 9 ALIGNMENT 408 YS2-20e17.p1k vc_1 614 1 1142 1749 C 614 90.23 786 reject_vc 3 ALIGNMENT 41 YS2-20e17.q1k vc_3 252 212 2472 2512 C 41 100.00 252 reject_low 10 ALIGNMENT 0 YS2-20e17.q1k vc_7 62 214 13525 13524 F 153 0.00 252 reject_low 13 ALIGNMENT 402 YS2-20e17.p1k vc_7 1 614 13918 14525 F 614 89.90 786 reject_vc 7 ALIGNMENT 41 YS2-20e17.q1k vc_2 252 212 2105 2145 C 41 100.00 252 reject_low 9 ALIGNMENT 408 YS2-20e17.p1k vc_2 614 1 1142 1749 C 614 90.23 786 reject_vc 4 ALIGNMENT 402 YS2-20e17.p1k vc_7 1 614 456 1063 F 614 89.90 786 reject_vc 6 ALIGNMENT 0 YS2-20e17.q1k vc_3 211 62 2513 2512 C 150 0.00 252 reject_low 10 ALIGNMENT 38 YS2-20e17.q1k vc_7 215 252 13525 13562 F 38 100.00 252 reject_low 13 ALIGNMENT 161 YS2-20e17.q1k chr15 212 38 34085 34259 C 175 97.71 252 accept 0 ALIGNMENT 0 YS2-20e17.q1k vc_4 62 211 5831 5830 F 150 0.00 252 reject_low 11 ALIGNMENT 0 YS2-20e17.q1k vc_5 213 62 5064 5063 C 152 0.00 252 reject_low 12 ALIGNMENT 316 YS2-20e18.q1k chr04 189 603 444908 445320 F 415 93.01 1138 accept 0 ALIGNMENT 38 YS2-20e19.q1k chr12 53 184 365937 366067 F 132 81.06 1201 reject_low 20 ALIGNMENT 0 YS2-20e19.q1k chr04 113 62 1206841 1206840 C 52 0.00 1201 reject_low 16 ALIGNMENT 105 YS2-20e19.q1k chr10 260 40 540680 540899 C 221 85.07 1201 reject_low 8 ALIGNMENT 110 YS2-20e19.q1k chr05 260 40 138221 138442 C 221 85.97 1201 reject_low 6 ALIGNMENT 96 YS2-20e19.q1k chr12 40 260 818184 818403 F 221 83.71 1201 reject_low 9 ALIGNMENT 0 YS2-20e19.q1k chr03 917 261 295000 294999 C 657 0.00 1201 reject_low 14 ALIGNMENT 0 YS2-20e19.q1k chr13 917 146 837551 837550 C 772 0.00 1201 reject_low 19 ALIGNMENT 0 YS2-20e19.q1k chr04 917 261 802901 802900 C 657 0.00 1201 reject_low 3 ALIGNMENT 0 YS2-20e19.q1k chr05 917 261 138222 138221 C 657 0.00 1201 reject_low 6 ALIGNMENT 46 YS2-20e19.q1k chr13 145 40 837550 837653 C 106 85.85 1201 reject_low 19 ALIGNMENT 0 YS2-20e19.q1k chr09 261 917 197485 197484 F 657 0.00 1201 reject_low 12 ALIGNMENT 68 YS2-20e19.q1k chr15 260 114 970282 970428 C 147 83.67 1201 reject_low 17 ALIGNMENT 116 YS2-20e19.q1k chr15 260 40 594513 594732 C 221 86.43 1201 reject_low 5 ALIGNMENT 0 YS2-20e19.q1k chr12 261 917 818403 818402 F 657 0.00 1201 reject_low 9 ALIGNMENT 0 YS2-20e19.q1k chr15 113 62 970429 970428 C 52 0.00 1201 reject_low 17 ALIGNMENT 0 YS2-20e19.q1k chr09 62 92 197318 197317 F 31 0.00 1201 reject_low 12 ALIGNMENT 0 YS2-20e19.q1k chr04 917 261 1206695 1206694 C 657 0.00 1201 reject_low 16 ALIGNMENT 107 YS2-20e19.q1k chr04 260 37 802900 803123 C 224 85.27 1201 reject_low 3 ALIGNMENT 0 YS2-20e19.q1k chr12 264 917 593040 593039 F 654 0.00 1201 reject_low 11 ALIGNMENT 68 YS2-20e19.q1k chr04 260 114 1206694 1206840 C 147 83.67 1201 reject_low 16 ALIGNMENT 0 YS2-20e19.q1k chr16 62 104 850354 850353 F 43 0.00 1201 reject_low 21 ALIGNMENT 105 YS2-20e19.q1k chr07 262 40 401960 402182 C 223 85.20 1201 reject_low 7 ALIGNMENT 25 YS2-20e19.q1k chr16 105 263 850354 850511 F 159 74.21 1201 reject_low 21 ALIGNMENT 0 YS2-20e19.q1k chr16 917 263 56451 56450 C 655 0.00 1201 reject_low 15 ALIGNMENT 983 YS2-20e19.q1k chr13 40 1196 573118 574273 F 1157 96.46 1201 accept 0 ALIGNMENT 0 YS2-20e19.q1k chr16 917 264 844406 844405 C 654 0.00 1201 reject_low 10 ALIGNMENT 74 YS2-20e19.q1k chr16 262 40 56450 56677 C 223 80.72 1201 reject_low 15 ALIGNMENT 88 YS2-20e19.q1k chr12 42 263 592819 593040 F 222 82.88 1201 reject_low 11 ALIGNMENT 0 YS2-20e19.q1k chr13 278 62 837579 837578 C 217 0.00 1201 reject_low 1 ALIGNMENT 136 YS2-20e19.q1k chr07 260 52 114943 115150 C 209 90.91 1201 reject_low 2 ALIGNMENT 0 YS2-20e19.q1k chr13 251 917 463443 463442 F 667 0.00 1201 reject_low 4 ALIGNMENT 0 YS2-20e19.q1k chr12 92 62 449002 449001 C 31 0.00 1201 reject_low 18 ALIGNMENT 0 YS2-20e19.q1k chr07 917 263 401961 401960 C 655 0.00 1201 reject_low 7 ALIGNMENT 0 YS2-20e19.q1k chr15 917 261 594514 594513 C 657 0.00 1201 reject_low 5 ALIGNMENT 0 YS2-20e19.q1k chr13 917 340 837519 837518 C 578 0.00 1201 reject_low 1 ALIGNMENT 0 YS2-20e19.q1k chr06 917 258 137659 137658 C 660 0.00 1201 reject_low 13 ALIGNMENT 0 YS2-20e19.q1k chr15 917 261 970283 970282 C 657 0.00 1201 reject_low 17 ALIGNMENT 965 YS2-20e19.p1k chr13 1207 34 574764 575935 C 1174 95.14 1275 accept 0 ALIGNMENT 0 YS2-20e19.q1k chr16 264 917 850511 850510 F 654 0.00 1201 reject_low 21 ALIGNMENT 76 YS2-20e19.q1k chr03 260 40 294999 295216 C 221 81.45 1201 reject_low 14 ALIGNMENT 86 YS2-20e19.q1k chr06 257 93 137658 137818 C 165 87.27 1201 reject_low 13 ALIGNMENT 66 YS2-20e19.q1k chr12 243 93 448860 449001 C 151 85.43 1201 reject_low 18 ALIGNMENT 0 YS2-20e19.q1k chr06 92 62 137819 137818 C 31 0.00 1201 reject_low 13 ALIGNMENT 0 YS2-20e19.q1k chr12 917 244 448861 448860 C 674 0.00 1201 reject_low 18 ALIGNMENT 0 YS2-20e19.q1k chr07 917 261 114944 114943 C 657 0.00 1201 reject_low 2 ALIGNMENT 0 YS2-20e19.q1k chr10 917 261 540681 540680 C 657 0.00 1201 reject_low 8 ALIGNMENT 21 YS2-20e19.q1k chr13 339 279 837518 837578 C 61 81.97 1201 reject_low 1 ALIGNMENT 96 YS2-20e19.q1k chr09 93 260 197318 197485 F 168 87.50 1201 reject_low 12 ALIGNMENT 129 YS2-20e19.q1k chr13 42 250 463236 463443 F 209 89.95 1201 reject_low 4 ALIGNMENT 89 YS2-20e19.q1k chr16 263 40 844405 844634 C 224 83.04 1201 reject_low 10 ALIGNMENT 0 YS2-20e19.q1k chr12 185 917 366067 366066 F 733 0.00 1201 reject_low 20 ALIGNMENT 1023 YS2-20e20.p1k chr09 1215 35 303272 304462 C 1181 96.44 1307 accept 0 ALIGNMENT 53 YS2-20e21.q1k chr16 119 181 437194 437258 F 63 96.83 1063 reject_low 17 ALIGNMENT 41 YS2-20e21.q1k chr12 181 228 941464 941511 F 48 97.92 1063 reject_low 9 ALIGNMENT 0 YS2-20e21.q1k chr07 167 338 319784 319783 F 172 0.00 1063 reject_low 3 ALIGNMENT 52 YS2-20e21.q1k chr14 119 180 632428 632491 F 62 96.77 1063 reject_low 21 ALIGNMENT 0 YS2-20e21.q1k chr10 343 182 197464 197463 C 162 0.00 1063 reject_low 16 ALIGNMENT 69 YS2-20e21.q1k chr05 339 410 207356 207427 F 72 98.61 1063 reject_low 7 ALIGNMENT 0 YS2-20e21.q1k chr02 181 343 36218 36217 F 163 0.00 1063 reject_low 18 ALIGNMENT 70 YS2-20e21.q1k chr13 338 414 363062 363138 F 77 97.40 1063 reject_low 5 ALIGNMENT 52 YS2-20e21.q1k chr16 119 180 443046 443109 F 62 96.77 1063 reject_low 23 ALIGNMENT 53 YS2-20e21.q1k chr13 119 182 808842 808907 F 64 96.88 1063 reject_low 14 ALIGNMENT 49 YS2-20e21.q1k chr14 180 119 561608 561671 C 62 95.16 1063 reject_low 26 ALIGNMENT 0 YS2-20e21.q1k chr15 343 228 704075 704074 C 116 0.00 1063 reject_low 12 ALIGNMENT 41 YS2-20e21.q1k chr10 228 181 354769 354816 C 48 97.92 1063 reject_low 8 ALIGNMENT 31 YS2-20e21.q1k chr15 227 181 709702 709748 C 47 91.49 1063 reject_low 13 ALIGNMENT 70 YS2-20e21.q1k chr11 414 338 313042 313118 C 77 97.40 1063 reject_low 4 ALIGNMENT 0 YS2-20e21.q1k chr13 183 343 808907 808906 F 161 0.00 1063 reject_low 14 ALIGNMENT 0 YS2-20e21.q1k chr05 338 167 434609 434608 C 172 0.00 1063 reject_low 6 ALIGNMENT 52 YS2-20e21.q1k chr05 119 184 354663 354730 F 66 95.45 1063 reject_low 15 ALIGNMENT 71 YS2-20e21.q1k chr07 339 416 319784 319861 F 78 97.44 1063 reject_low 3 ALIGNMENT 0 YS2-20e21.q1k chr13 167 337 363062 363061 F 171 0.00 1063 reject_low 5 ALIGNMENT 0 YS2-20e21.q1k chr10 343 229 354770 354769 C 115 0.00 1063 reject_low 8 ALIGNMENT 70 YS2-20e21.q1k chr05 414 339 434533 434608 C 76 97.37 1063 reject_low 6 ALIGNMENT 53 YS2-20e21.q1k chr10 181 119 197463 197527 C 63 96.83 1063 reject_low 16 ALIGNMENT 0 YS2-20e21.q1k chr11 337 167 313119 313118 C 171 0.00 1063 reject_low 4 ALIGNMENT 0 YS2-20e21.q1k chr04 343 182 437146 437145 C 162 0.00 1063 reject_low 25 ALIGNMENT 0 YS2-20e21.q1k chr14 343 182 96451 96450 C 162 0.00 1063 reject_low 24 ALIGNMENT 0 YS2-20e21.q1k chr15 343 228 709703 709702 C 116 0.00 1063 reject_low 13 ALIGNMENT 0 YS2-20e21.q1k chr14 181 343 632491 632490 F 163 0.00 1063 reject_low 21 ALIGNMENT 0 YS2-20e21.q1k chr12 229 343 947138 947137 F 115 0.00 1063 reject_low 10 ALIGNMENT 0 YS2-20e21.q1k chr14 343 181 561609 561608 C 163 0.00 1063 reject_low 26 ALIGNMENT 0 YS2-20e21.q1k chr13 343 181 503771 503770 C 163 0.00 1063 reject_low 20 ALIGNMENT 52 YS2-20e21.q1k chr15 180 119 703773 703836 C 62 96.77 1063 reject_low 22 ALIGNMENT 31 YS2-20e21.q1k chr05 238 181 431485 431542 C 58 87.93 1063 reject_low 11 ALIGNMENT 50 YS2-20e21.q1k chr14 181 119 96450 96514 C 63 95.24 1063 reject_low 24 ALIGNMENT 41 YS2-20e21.q1k chr12 181 228 947091 947138 F 48 97.92 1063 reject_low 10 ALIGNMENT 52 YS2-20e21.q1k chr02 119 180 36155 36218 F 62 96.77 1063 reject_low 18 ALIGNMENT 52 YS2-20e21.q1k chr13 180 119 503770 503833 C 62 96.77 1063 reject_low 20 ALIGNMENT 320 YS2-20e21.p1k chr16 40 374 545697 546031 F 335 99.40 1250 reject_low 1 ALIGNMENT 0 YS2-20e21.q1k chr16 182 343 437258 437257 F 162 0.00 1063 reject_low 17 ALIGNMENT 406 YS2-20e21.q1k chr07 698 119 110339 110922 C 580 91.90 1063 accept 0 ALIGNMENT 0 YS2-20e21.p1k chr07 62 372 105981 105980 F 311 0.00 1250 accept 0 ALIGNMENT 0 YS2-20e21.q1k chr08 167 337 62752 62751 F 171 0.00 1063 reject_low 2 ALIGNMENT 0 YS2-20e21.p1k chr16 375 935 546031 546030 F 561 0.00 1250 reject_low 1 ALIGNMENT 0 YS2-20e21.q1k chr09 181 343 197020 197019 F 163 0.00 1063 reject_low 19 ALIGNMENT 31 YS2-20e21.q1k chr15 227 181 704074 704120 C 47 91.49 1063 reject_low 12 ALIGNMENT 0 YS2-20e21.q1k chr16 181 343 443109 443108 F 163 0.00 1063 reject_low 23 ALIGNMENT 0 YS2-20e21.q1k chr05 343 239 431486 431485 C 105 0.00 1063 reject_low 11 ALIGNMENT 0 YS2-20e21.q1k chr15 343 181 703774 703773 C 163 0.00 1063 reject_low 22 ALIGNMENT 0 YS2-20e21.q1k chr05 185 343 354730 354729 F 159 0.00 1063 reject_low 15 ALIGNMENT 0 YS2-20e21.q1k chr12 229 343 941511 941510 F 115 0.00 1063 reject_low 9 ALIGNMENT 70 YS2-20e21.q1k chr08 338 417 62752 62831 F 80 96.25 1063 reject_low 2 ALIGNMENT 715 YS2-20e21.p1k chr07 373 1244 105981 106864 F 872 95.30 1250 accept 0 ALIGNMENT 0 YS2-20e21.q1k chr05 167 338 207356 207355 F 172 0.00 1063 reject_low 7 ALIGNMENT 52 YS2-20e21.q1k chr09 119 180 196957 197020 F 62 96.77 1063 reject_low 19 ALIGNMENT 50 YS2-20e21.q1k chr04 181 125 437145 437202 C 57 98.25 1063 reject_low 25 ALIGNMENT 962 YS2-20e22.q1k chr01 1146 53 123467 124557 C 1094 97.71 1151 accept 0 ALIGNMENT 967 YS2-20e22.p1k chr01 42 1221 119661 120852 F 1180 94.83 1295 accept 0 ALIGNMENT 976 YS2-20e23.p1k chr12 1241 30 498869 500080 C 1212 94.64 1261 accept 0 ALIGNMENT 62 YS2-20e23.p1k chr11 933 1145 617797 618007 F 213 76.53 1261 reject_low 1 ALIGNMENT 906 YS2-20e23.q1k chr12 52 1127 494837 495903 F 1076 96.28 1163 accept 0 ALIGNMENT 0 YS2-20e23.p1k chr11 62 932 617797 617796 F 871 0.00 1261 reject_low 1 ALIGNMENT 23 YS2-20e24.p1k vc_1 966 936 2441 2472 C 31 93.55 1295 reject_low 6 ALIGNMENT 0 YS2-20e24.p1k vc_3 935 62 2473 2472 C 874 0.00 1295 reject_low 7 ALIGNMENT 793 YS2-20e24.p1k chr16 918 33 875686 876571 C 886 97.74 1295 accept_chi 0 ALIGNMENT 128 YS2-20e24.p1k vc_2 1292 936 1753 2105 C 357 80.67 1295 reject_low 3 ALIGNMENT 0 YS2-20e24.p1k vc_1 935 62 2106 2105 C 874 0.00 1295 reject_low 2 ALIGNMENT 124 YS2-20e24.p1k vc_7 936 1275 100 434 F 340 80.88 1295 reject_low 5 ALIGNMENT 128 YS2-20e24.p1k vc_3 1292 936 1753 2105 C 357 80.67 1295 reject_low 4 ALIGNMENT 23 YS2-20e24.p1k vc_3 966 936 2441 2472 C 31 93.55 1295 reject_low 7 ALIGNMENT 0 YS2-20e24.p1k vc_1 935 62 2473 2472 C 874 0.00 1295 reject_low 6 ALIGNMENT 0 YS2-20e24.p1k vc_2 935 62 2106 2105 C 874 0.00 1295 reject_low 3 ALIGNMENT 769 YS2-20e24.q1k chr16 28 919 875687 876571 F 892 96.75 1222 accept_chi 1 ALIGNMENT 128 YS2-20e24.p1k vc_1 1292 936 1753 2105 C 357 80.67 1295 reject_low 2 ALIGNMENT 0 YS2-20e24.p1k vc_7 62 935 100 99 F 874 0.00 1295 reject_low 5 ALIGNMENT 0 YS2-20e24.p1k vc_3 935 62 2106 2105 C 874 0.00 1295 reject_low 4 ALIGNMENT 41 YS2-20f01.q1k chr07 772 897 405013 405138 F 126 80.95 1174 reject_low 4 ALIGNMENT 99 YS2-20f01.q1k chr08 494 608 388883 388998 F 115 95.65 1174 reject_low 3 ALIGNMENT 93 YS2-20f01.q1k chr12 263 41 95563 95764 C 223 84.30 1174 reject_low 1 ALIGNMENT 101 YS2-20f01.q1k chr12 615 506 92540 92649 C 110 97.27 1174 reject_low 1 ALIGNMENT 99 YS2-20f01.q1k chr14 609 505 547094 547198 C 105 98.10 1174 reject_low 6 ALIGNMENT 0 YS2-20f01.q1k chr14 504 62 547199 547198 C 443 0.00 1174 reject_low 6 ALIGNMENT 0 YS2-20f01.q1k chr10 62 711 416365 416364 F 650 0.00 1174 reject_low 2 ALIGNMENT 0 YS2-20f01.q1k chr14 505 62 568219 568218 C 444 0.00 1174 reject_low 12 ALIGNMENT 0 YS2-20f01.q1k chr06 505 62 101473 101472 C 444 0.00 1174 reject_low 5 ALIGNMENT 0 YS2-20f01.q1k chr15 846 610 301097 301096 C 237 0.00 1174 reject_low 9 ALIGNMENT 90 YS2-20f01.q1k chr15 609 506 301096 301198 C 104 96.15 1174 reject_low 9 ALIGNMENT 0 YS2-20f01.q1k chr07 62 771 405013 405012 F 710 0.00 1174 reject_low 4 ALIGNMENT 0 YS2-20f01.q1k chr15 505 62 464553 464552 C 444 0.00 1174 reject_low 8 ALIGNMENT 0 YS2-20f01.q1k chr14 771 62 567988 567987 C 710 0.00 1174 reject_low 11 ALIGNMENT 0 YS2-20f01.q1k chr15 846 613 980675 980674 C 234 0.00 1174 reject_low 10 ALIGNMENT 78 YS2-20f01.q1k chr15 612 506 980674 980782 C 107 91.59 1174 reject_low 10 ALIGNMENT 0 YS2-20f01.q1k chr08 62 493 388883 388882 F 432 0.00 1174 reject_low 3 ALIGNMENT 0 YS2-20f01.q1k chr12 505 264 92650 95562 C 242 0.00 1174 reject_low 1 ALIGNMENT 0 YS2-20f01.q1k chr06 846 610 101370 101369 C 237 0.00 1174 reject_low 5 ALIGNMENT 30 YS2-20f01.q1k chr14 836 772 562295 562359 C 65 84.62 1174 reject_low 12 ALIGNMENT 95 YS2-20f01.q1k chr15 608 506 464451 464552 C 103 98.06 1174 reject_low 8 ALIGNMENT 904 YS2-20f01.q1k chr01 1166 38 138596 139716 C 1129 94.95 1174 accept 0 ALIGNMENT 100 YS2-20f01.q1k chr13 506 608 196068 196170 F 103 99.03 1174 reject_low 13 ALIGNMENT 30 YS2-20f01.q1k chr14 836 772 567923 567987 C 65 84.62 1174 reject_low 11 ALIGNMENT 0 YS2-20f01.q1k chr15 505 62 301199 301198 C 444 0.00 1174 reject_low 9 ALIGNMENT 0 YS2-20f01.q1k chr15 505 62 980783 980782 C 444 0.00 1174 reject_low 10 ALIGNMENT 0 YS2-20f01.q1k chr15 846 609 464452 464451 C 238 0.00 1174 reject_low 8 ALIGNMENT 0 YS2-20f01.q1k chr13 609 771 196171 196337 F 163 0.00 1174 reject_low 13 ALIGNMENT 0 YS2-20f01.q1k chr08 609 846 388998 388997 F 238 0.00 1174 reject_low 3 ALIGNMENT 24 YS2-20f01.q1k chr13 772 836 196338 196402 F 65 81.54 1174 reject_low 13 ALIGNMENT 0 YS2-20f01.q1k chr05 771 62 436268 436267 C 710 0.00 1174 reject_low 7 ALIGNMENT 0 YS2-20f01.q1k chr12 846 616 92541 92540 C 231 0.00 1174 reject_low 1 ALIGNMENT 104 YS2-20f01.q1k chr06 609 506 101369 101472 C 104 100.00 1174 reject_low 5 ALIGNMENT 0 YS2-20f01.q1k chr14 846 610 547095 547094 C 237 0.00 1174 reject_low 6 ALIGNMENT 98 YS2-20f01.q1k chr14 609 506 568115 568218 C 104 98.08 1174 reject_low 12 ALIGNMENT 67 YS2-20f01.q1k chr10 712 827 416365 416480 F 116 88.79 1174 reject_low 2 ALIGNMENT 41 YS2-20f01.q1k chr05 891 772 436149 436267 C 120 80.00 1174 reject_low 7 ALIGNMENT 0 YS2-20f01.q1k chr14 771 610 562360 568114 C 162 0.00 1174 reject_low 12 ALIGNMENT 0 YS2-20f01.q1k chr10 828 846 416480 416479 F 19 0.00 1174 reject_low 2 ALIGNMENT 0 YS2-20f01.q1k chr13 62 505 196068 196067 F 444 0.00 1174 reject_low 13 ALIGNMENT 949 YS2-20f02.p1k chr13 1140 39 595639 596730 C 1102 96.73 1414 accept 0 ALIGNMENT 998 YS2-20f02.q1k chr13 39 1172 594423 595565 F 1134 97.09 1172 accept 0 ALIGNMENT 884 YS2-20f03.q1k chr07 1170 35 195327 196448 C 1136 93.93 1246 accept 0 ALIGNMENT 672 YS2-20f03.p1k chr07 218 1091 190328 191196 F 874 93.36 1427 accept 0 ALIGNMENT 798 YS2-20f05.p1k chr11 30 1286 397077 398321 F 1257 89.26 1447 accept 0 ALIGNMENT 1023 YS2-20f05.q1k chr11 1227 32 399877 401077 C 1196 96.24 1263 accept 0 ALIGNMENT 945 YS2-20f06.p1k chr11 34 1231 266174 267385 F 1198 94.57 1365 accept 0 ALIGNMENT 1003 YS2-20f06.q1k chr11 1228 40 268653 269847 C 1189 95.88 1297 accept 0 ALIGNMENT 1055 YS2-20f07.q1k chr12 39 1242 465576 466788 F 1204 96.43 1242 accept 1 ALIGNMENT 1055 YS2-20f07.q1k chr12 39 1242 456439 457651 F 1204 96.43 1242 accept 0 ALIGNMENT 1040 YS2-20f07.p1k chr12 1341 28 456855 458172 C 1314 94.22 1381 accept 0 ALIGNMENT 1040 YS2-20f07.p1k chr12 1341 28 465992 467309 C 1314 94.22 1381 accept 1 ALIGNMENT 415 YS2-20f08.p1k vc_1 603 1 1137 1749 C 603 90.38 746 reject_vc 2 ALIGNMENT 0 YS2-20f08.q1k vc_5 270 62 5064 5063 C 209 0.00 309 reject_low 12 ALIGNMENT 0 YS2-20f08.q1k vc_4 62 268 5831 5830 F 207 0.00 309 reject_low 11 ALIGNMENT 41 YS2-20f08.q1k vc_2 309 269 2105 2145 C 41 100.00 309 reject_low 9 ALIGNMENT 0 YS2-20f08.q1k vc_5 270 62 37 36 C 209 0.00 309 reject_low 14 ALIGNMENT 409 YS2-20f08.p1k vc_7 1 603 13918 14530 F 603 90.05 746 reject_vc 6 ALIGNMENT 418 YS2-20f08.p1k vc_5 603 1 4057 4669 C 603 90.55 746 reject_vc 1 ALIGNMENT 36 YS2-20f08.q1k vc_5 306 271 1 36 C 36 100.00 309 reject_low 14 ALIGNMENT 0 YS2-20f08.q1k vc_3 268 62 2513 2512 C 207 0.00 309 reject_low 10 ALIGNMENT 41 YS2-20f08.q1k vc_4 269 309 5831 5871 F 41 100.00 309 reject_low 11 ALIGNMENT 41 YS2-20f08.q1k vc_1 309 269 2472 2512 C 41 100.00 309 reject_low 8 ALIGNMENT 0 YS2-20f08.q1k vc_2 268 62 2146 2145 C 207 0.00 309 reject_low 9 ALIGNMENT 207 YS2-20f08.q1k chr11 268 48 484451 484671 C 221 99.55 309 accept 0 ALIGNMENT 0 YS2-20f08.q1k chr11 309 269 484452 484451 C 41 0.00 309 accept 0 ALIGNMENT 0 YS2-20f08.q1k vc_7 62 271 13525 13524 F 210 0.00 309 reject_low 13 ALIGNMENT 41 YS2-20f08.q1k vc_3 309 269 2472 2512 C 41 100.00 309 reject_low 10 ALIGNMENT 415 YS2-20f08.p1k vc_3 603 1 1137 1749 C 603 90.38 746 reject_vc 4 ALIGNMENT 0 YS2-20f08.q1k vc_1 268 62 2513 2512 C 207 0.00 309 reject_low 8 ALIGNMENT 39 YS2-20f08.q1k vc_5 309 271 5025 5063 C 39 100.00 309 reject_low 12 ALIGNMENT 415 YS2-20f08.p1k vc_2 603 1 1137 1749 C 603 90.38 746 reject_vc 3 ALIGNMENT 409 YS2-20f08.p1k vc_6 1 573 3712 4293 F 573 91.27 746 reject_vc 7 ALIGNMENT 38 YS2-20f08.q1k vc_7 272 309 13525 13562 F 38 100.00 309 reject_low 13 ALIGNMENT 409 YS2-20f08.p1k vc_7 1 603 456 1068 F 603 90.05 746 reject_vc 5 ALIGNMENT 966 YS2-20f09.q1k chr05 1163 39 346123 347262 C 1125 96.18 1251 accept 0 ALIGNMENT 1056 YS2-20f09.p1k chr05 33 1247 341488 342721 F 1215 96.71 1340 accept 0 ALIGNMENT 975 YS2-20f10.p1k chr12 1211 30 872363 873551 C 1182 95.43 1382 accept 0 ALIGNMENT 1075 YS2-20f10.q1k chr12 38 1270 867205 868433 F 1233 97.00 1270 accept 0 ALIGNMENT 0 YS2-20f11.q1k chr08 62 84 91818 91817 F 23 0.00 1233 reject_low 20 ALIGNMENT 0 YS2-20f11.q1k chr07 504 929 931543 931542 F 426 0.00 1233 reject_low 16 ALIGNMENT 0 YS2-20f11.q1k chr05 62 132 354356 354355 F 71 0.00 1233 reject_low 13 ALIGNMENT 0 YS2-20f11.q1k chr14 62 84 96666 96665 F 23 0.00 1233 reject_low 19 ALIGNMENT 57 YS2-20f11.q1k chr15 217 133 710025 710108 C 85 94.12 1233|2,0 reject_low 24 ALIGNMENT 28 YS2-20f11.q1k chr14 85 131 96666 96711 F 47 89.36 1233 reject_low 19 ALIGNMENT 0 YS2-20f11.q1k chr16 504 929 443109 443108 F 426 0.00 1233 reject_low 11 ALIGNMENT 0 YS2-20f11.q1k chr12 132 929 784275 784274 F 798 0.00 1233 reject_low 3 ALIGNMENT 0 YS2-20f11.q1k chr14 130 929 562131 562130 F 800 0.00 1233 reject_low 21 ALIGNMENT 0 YS2-20f11.q1k chr10 132 62 197835 197834 C 71 0.00 1233 reject_low 4 ALIGNMENT 0 YS2-20f11.q1k chr14 504 929 632491 632490 F 426 0.00 1233 reject_low 18 ALIGNMENT 334 YS2-20f11.q1k chr14 133 503 632121 632491 F 371 98.11 1233 reject_low 18 ALIGNMENT 146 YS2-20f11.q1k chr14 504 345 96450 96609 C 160 98.12 1233 reject_low 17 ALIGNMENT 908 YS2-20f11.q1k chr08 1197 129 90689 91761 C 1069 96.91 1233 ambiguous_trans 1 ALIGNMENT 21 YS2-20f11.q1k chr14 85 129 562089 562131 F 45 86.67 1233 reject_low 21 ALIGNMENT 346 YS2-20f11.q1k chr08 503 133 85535 85905 C 371 99.19 1233 reject_low 10 ALIGNMENT 0 YS2-20f11.q1k chr10 132 62 203690 203689 C 71 0.00 1233 ambiguous_trans 0 ALIGNMENT 0 YS2-20f11.q1k chr14 62 84 632056 632055 F 23 0.00 1233 reject_low 18 ALIGNMENT 0 YS2-20f11.q1k chr02 504 929 36218 36217 F 426 0.00 1233 reject_low 5 ALIGNMENT 0 YS2-20f11.q1k chr09 504 929 197020 197019 F 426 0.00 1233 reject_low 6 ALIGNMENT 0 YS2-20f11.q1k chr10 929 506 197463 197462 C 424 0.00 1233 reject_low 4 ALIGNMENT 355 YS2-20f11.q1k chr13 503 133 503770 504140 C 371 100.00 1233 reject_low 7 ALIGNMENT 0 YS2-20f11.q1k chr16 62 132 442739 442738 F 71 0.00 1233 reject_low 11 ALIGNMENT 0 YS2-20f11.q1k chr08 128 62 91762 91761 C 67 0.00 1233 ambiguous_trans 1 ALIGNMENT 904 YS2-20f11.q1k chr16 133 1197 436887 437955 F 1065 96.90 1233 ambiguous_trans 2 ALIGNMENT 0 YS2-20f11.q1k chr13 62 132 808536 808535 F 71 0.00 1233 reject_low 14 ALIGNMENT 357 YS2-20f11.q1k chr10 505 133 197462 197834 C 373 100.00 1233 reject_low 4 ALIGNMENT 21 YS2-20f11.q1k chr15 85 129 709747 709790 F 45 84.44 1233 reject_low 23 ALIGNMENT 1001 YS2-20f11.p1k chr10 35 1229 201718 202921 F 1195 96.65 1372 ambiguous_trans 0 ALIGNMENT 0 YS2-20f11.q1k chr14 128 62 561983 561982 C 67 0.00 1233 reject_low 8 ALIGNMENT 0 YS2-20f11.q1k chr07 130 62 111232 111231 C 69 0.00 1233 reject_low 9 ALIGNMENT 0 YS2-20f11.q1k chr13 132 62 504141 504140 C 71 0.00 1233 reject_low 7 ALIGNMENT 0 YS2-20f11.q1k chr15 130 929 704162 704161 F 800 0.00 1233 reject_low 22 ALIGNMENT 919 YS2-20f11.q1k chr10 1197 133 202621 203689 C 1065 97.37 1233 ambiguous_trans 0 ALIGNMENT 0 YS2-20f11.q1k chr02 62 132 643483 643482 F 71 0.00 1233 reject_low 12 ALIGNMENT 308 YS2-20f11.q1k chr07 133 503 931174 931543 F 371 95.96 1233 reject_low 16 ALIGNMENT 342 YS2-20f11.q1k chr07 504 131 110858 111231 C 374 98.66 1233 reject_low 9 ALIGNMENT 0 YS2-20f11.q1k chr14 130 132 632100 632120 F 3 0.00 1233 reject_low 18 ALIGNMENT 0 YS2-20f11.q1k chr07 929 505 110859 110858 C 425 0.00 1233 reject_low 9 ALIGNMENT 989 YS2-20f11.p1k chr16 1229 35 437655 438858 C 1195 96.32 1372 ambiguous_trans 2 ALIGNMENT 0 YS2-20f11.q1k chr02 62 132 35848 35847 F 71 0.00 1233 reject_low 5 ALIGNMENT 27 YS2-20f11.q1k chr14 85 129 632056 632099 F 45 88.89 1233 reject_low 18 ALIGNMENT 0 YS2-20f11.q1k chr14 929 504 561609 561608 C 426 0.00 1233 reject_low 8 ALIGNMENT 0 YS2-20f11.q1k chr13 505 929 808906 808905 F 425 0.00 1233 reject_low 14 ALIGNMENT 0 YS2-20f11.q1k chr15 130 929 709790 709789 F 800 0.00 1233 reject_low 23 ALIGNMENT 327 YS2-20f11.q1k chr13 133 504 808536 808906 F 372 97.58 1233 reject_low 14 ALIGNMENT 0 YS2-20f11.q1k chr02 505 929 643854 643853 F 425 0.00 1233 reject_low 12 ALIGNMENT 343 YS2-20f11.q1k chr16 133 503 442739 443109 F 371 98.92 1233 reject_low 11 ALIGNMENT 0 YS2-20f11.q1k chr04 929 505 437146 437145 C 425 0.00 1233 reject_low 15 ALIGNMENT 0 YS2-20f11.q1k chr15 62 84 704119 704118 F 23 0.00 1233 reject_low 22 ALIGNMENT 0 YS2-20f11.q1k chr13 929 504 503771 503770 C 426 0.00 1233 reject_low 7 ALIGNMENT 0 YS2-20f11.q1k chr08 929 504 85536 85535 C 426 0.00 1233 reject_low 10 ALIGNMENT 343 YS2-20f11.q1k chr14 503 129 561608 561982 C 375 98.67 1233 reject_low 8 ALIGNMENT 0 YS2-20f11.q1k chr14 929 505 96451 96450 C 425 0.00 1233 reject_low 17 ALIGNMENT 0 YS2-20f11.q1k chr08 130 929 91861 91860 F 800 0.00 1233 reject_low 20 ALIGNMENT 312 YS2-20f11.q1k chr04 504 133 437145 437515 C 372 96.24 1233 reject_low 15 ALIGNMENT 331 YS2-20f11.q1k chr05 133 503 354356 354726 F 371 97.84 1233 reject_low 13 ALIGNMENT 0 YS2-20f11.q1k chr15 132 62 710109 710108 C 71 0.00 1233 reject_low 24 ALIGNMENT 0 YS2-20f11.q1k chr14 344 62 96610 96609 C 283 0.00 1233 reject_low 17 ALIGNMENT 21 YS2-20f11.q1k chr15 85 129 704119 704162 F 45 84.44 1233 reject_low 22 ALIGNMENT 67 YS2-20f11.q1k chr12 40 131 784184 784275 F 92 92.39 1233 reject_low 3 ALIGNMENT 0 YS2-20f11.q1k chr15 62 84 709747 709746 F 23 0.00 1233 reject_low 23 ALIGNMENT 0 YS2-20f11.q1k chr07 62 132 931174 931173 F 71 0.00 1233 reject_low 16 ALIGNMENT 27 YS2-20f11.q1k chr08 85 129 91818 91861 F 45 88.89 1233 reject_low 20 ALIGNMENT 355 YS2-20f11.q1k chr09 133 503 196650 197020 F 371 100.00 1233 reject_low 6 ALIGNMENT 989 YS2-20f11.p1k chr08 35 1229 89786 90989 F 1195 96.40 1372 ambiguous_trans 1 ALIGNMENT 0 YS2-20f11.q1k chr14 62 84 562089 562088 F 23 0.00 1233 reject_low 21 ALIGNMENT 265 YS2-20f11.q1k chr15 503 213 703773 704063 C 291 98.28 1233|0,3 reject_low 24 ALIGNMENT 0 YS2-20f11.q1k chr04 132 62 437516 437515 C 71 0.00 1233 reject_low 15 ALIGNMENT 0 YS2-20f11.q1k chr16 62 132 436887 436886 F 71 0.00 1233 ambiguous_trans 2 ALIGNMENT 0 YS2-20f11.q1k chr15 215 216 704061 710026 C 0 0.00 1233 reject_low 24 ALIGNMENT 0 YS2-20f11.q1k chr14 132 929 96711 96710 F 798 0.00 1233 reject_low 19 ALIGNMENT 0 YS2-20f11.q1k chr09 62 132 196650 196649 F 71 0.00 1233 reject_low 6 ALIGNMENT 0 YS2-20f11.q1k chr05 504 929 354726 354725 F 426 0.00 1233 reject_low 13 ALIGNMENT 0 YS2-20f11.q1k chr08 132 62 85906 85905 C 71 0.00 1233 reject_low 10 ALIGNMENT 337 YS2-20f11.q1k chr02 133 504 643483 643854 F 372 98.39 1233 reject_low 12 ALIGNMENT 355 YS2-20f11.q1k chr02 133 503 35848 36218 F 371 100.00 1233 reject_low 5 ALIGNMENT 0 YS2-20f11.q1k chr15 929 504 703774 703773 C 426 0.00 1233 reject_low 24 ALIGNMENT 1043 YS2-20f12.p1k chr10 31 1307 492736 494000 F 1277 95.38 1418 accept 0 ALIGNMENT 1028 YS2-20f12.q1k chr10 1248 30 494711 495930 C 1219 95.57 1260 accept 0 ALIGNMENT 981 YS2-20f13.q1k chr16 1230 51 32704 33885 C 1180 95.51 1296 accept 0 ALIGNMENT 925 YS2-20f13.p1k chr16 42 1186 28825 29988 F 1145 94.76 1279 accept 0 ALIGNMENT 1048 YS2-20f14.p1k chr11 1286 42 243206 244459 C 1245 95.26 1310 accept 0 ALIGNMENT 435 YS2-20f14.q1k chr11 88 612 239347 239885 F 525 95.62 1067 accept 0 ALIGNMENT 991 YS2-20f16.q1k chr16 42 1232 636781 637965 F 1191 95.72 1251 accept 0 ALIGNMENT 1018 YS2-20f16.p1k chr16 1194 35 640705 641875 C 1160 96.81 1319 accept 0 ALIGNMENT 0 YS2-20f17.q1k vc_1 62 1083 2531 2530 F 1022 0.00 1252 reject_low 3 ALIGNMENT 0 YS2-20f17.q1k vc_4 1083 62 5813 5812 C 1022 0.00 1252 reject_low 6 ALIGNMENT 71 YS2-20f17.q1k vc_5 1084 1246 2398 2560 F 163 82.21 1252 reject_low 7 ALIGNMENT 35 YS2-20f17.q1k vc_2 1084 1044 2105 2145 C 41 95.12 1252 reject_low 12 ALIGNMENT 0 YS2-20f17.q1k vc_4 1083 62 1535 1534 C 1022 0.00 1252 reject_low 10 ALIGNMENT 71 YS2-20f17.q1k vc_3 1084 1246 2531 2693 F 163 82.21 1252 reject_low 5 ALIGNMENT 0 YS2-20f17.p1k vc_1 1064 62 2096 2095 C 1003 0.00 1372 reject_low 1 ALIGNMENT 70 YS2-20f17.q1k vc_4 1084 1242 6353 6511 F 159 82.39 1252|1,0 reject_low 9 ALIGNMENT 56 YS2-20f17.p1k vc_1 1227 1065 1931 2095 C 163 79.14 1372 reject_low 1 ALIGNMENT 912 YS2-20f17.q1k chr11 40 1040 547311 548302 F 1001 98.30 1252 accept 0 ALIGNMENT 0 YS2-20f17.q1k vc_7 62 1046 13525 13524 F 985 0.00 1252 reject_low 15 ALIGNMENT 0 YS2-20f17.q1k vc_4 1085 1084 5872 6353 F 0 0.00 1252 reject_low 9 ALIGNMENT 35 YS2-20f17.q1k vc_4 1044 1084 5831 5871 F 41 95.12 1252 reject_low 9 ALIGNMENT 35 YS2-20f17.q1k vc_3 1084 1044 2472 2512 C 41 95.12 1252 reject_low 13 ALIGNMENT 33 YS2-20f17.q1k vc_5 1084 1046 5025 5063 C 39 94.87 1252 reject_low 14 ALIGNMENT 30 YS2-20f17.q1k vc_5 1081 1046 1 36 C 36 94.44 1252 reject_low 16 ALIGNMENT 0 YS2-20f17.q1k vc_1 1043 62 2513 2512 C 982 0.00 1252 reject_low 11 ALIGNMENT 70 YS2-20f17.q1k vc_4 1084 1242 126 284 F 159 82.39 1252 reject_low 8 ALIGNMENT 0 YS2-20f17.q1k vc_5 1045 62 5064 5063 C 984 0.00 1252 reject_low 14 ALIGNMENT 71 YS2-20f17.q1k vc_2 1084 1246 2164 2326 F 163 82.21 1252 reject_low 4 ALIGNMENT 0 YS2-20f17.q1k vc_2 62 1083 2164 2163 F 1022 0.00 1252 reject_low 4 ALIGNMENT 56 YS2-20f17.p1k vc_3 1227 1065 1931 2095 C 163 79.14 1372 reject_low 2 ALIGNMENT 71 YS2-20f17.q1k vc_4 1246 1084 5650 5812 C 163 82.82 1252 reject_low 6 ALIGNMENT 71 YS2-20f17.q1k vc_1 1084 1246 2531 2693 F 163 82.21 1252 reject_low 3 ALIGNMENT 35 YS2-20f17.q1k vc_1 1084 1044 2472 2512 C 41 95.12 1252 reject_low 11 ALIGNMENT 0 YS2-20f17.q1k vc_2 1043 62 2146 2145 C 982 0.00 1252 reject_low 12 ALIGNMENT 0 YS2-20f17.q1k vc_4 62 1083 126 125 F 1022 0.00 1252 reject_low 8 ALIGNMENT 0 YS2-20f17.q1k vc_5 62 1083 2398 2397 F 1022 0.00 1252 reject_low 7 ALIGNMENT 0 YS2-20f17.q1k vc_3 1043 62 2513 2512 C 982 0.00 1252 reject_low 13 ALIGNMENT 0 YS2-20f17.q1k vc_4 62 1043 5831 5830 F 982 0.00 1252 reject_low 9 ALIGNMENT 32 YS2-20f17.q1k vc_7 1047 1084 13525 13562 F 38 94.74 1252 reject_low 15 ALIGNMENT 54 YS2-20f17.q1k vc_4 1169 1084 1448 1534 C 86 88.37 1252 reject_low 10 ALIGNMENT 878 YS2-20f17.p1k chr11 1034 35 547313 548305 C 1000 97.20 1372 accept 0 ALIGNMENT 0 YS2-20f17.p1k vc_3 1064 62 2096 2095 C 1003 0.00 1372 reject_low 2 ALIGNMENT 0 YS2-20f17.q1k vc_3 62 1083 2531 2530 F 1022 0.00 1252 reject_low 5 ALIGNMENT 0 YS2-20f17.q1k vc_5 1045 62 37 36 C 984 0.00 1252 reject_low 16 ALIGNMENT 0 YS2-20f19.q1k chrm 446 236 30156 30155 C 211 0.00 446 reject_low 13 ALIGNMENT 0 YS2-20f19.q1k chrm 237 446 12845 12844 F 210 0.00 446 reject_low 12 ALIGNMENT 105 YS2-20f19.q1k chrm 235 86 30155 30305 C 150 92.00 446 reject_low 13 ALIGNMENT 61 YS2-20f19.q1k chrm 173 31 82327 82469 C 143 86.71 446 reject_low 16 ALIGNMENT 106 YS2-20f19.p1k vc_1 224 1 1534 1749 C 224 85.71 580 reject_vc 3 ALIGNMENT 106 YS2-20f19.p1k vc_3 224 1 1534 1749 C 224 85.71 580 reject_vc 5 ALIGNMENT 106 YS2-20f19.p1k vc_6 1 224 3712 3927 F 224 85.71 580 reject_vc 7 ALIGNMENT 0 YS2-20f19.q1k chrm 174 446 54842 54841 F 273 0.00 446 reject_low 17 ALIGNMENT 41 YS2-20f19.q1k vc_3 446 406 2472 2512 C 41 100.00 446 reject_low 9 ALIGNMENT 38 YS2-20f19.q1k vc_7 409 446 13525 13562 F 38 100.00 446 reject_low 11 ALIGNMENT 255 YS2-20f19.q1k chrm 41 375 4182 4517 F 335 98.21 446 accept 0 ALIGNMENT 0 YS2-20f19.q1k chrm 85 62 30306 30305 C 24 0.00 446 reject_low 13 ALIGNMENT 81 YS2-20f19.q1k chrm 41 259 56700 56921 F 219 83.56 446 reject_low 14 ALIGNMENT 41 YS2-20f19.q1k vc_1 446 406 2472 2512 C 41 100.00 446 reject_low 8 ALIGNMENT 37 YS2-20f19.q1k chrm 31 173 54699 54842 F 143 81.82 446 reject_low 17 ALIGNMENT 107 YS2-20f19.p1k vc_7 1 265 13918 14169 F 265 84.15 580 reject_vc 2 ALIGNMENT 91 YS2-20f19.q1k chrm 229 41 44868 45056 C 189 86.24 446 reject_low 15 ALIGNMENT 0 YS2-20f19.q1k vc_1 405 62 2513 2512 C 344 0.00 446 reject_low 8 ALIGNMENT 0 YS2-20f19.q1k chrm 376 446 4517 4516 F 71 0.00 446 accept 0 ALIGNMENT 0 YS2-20f19.q1k vc_3 405 62 2513 2512 C 344 0.00 446 reject_low 9 ALIGNMENT 0 YS2-20f19.q1k chrm 446 230 44869 44868 C 217 0.00 446 reject_low 15 ALIGNMENT 0 YS2-20f19.q1k vc_4 62 405 5831 5830 F 344 0.00 446 reject_low 10 ALIGNMENT 107 YS2-20f19.p1k vc_7 1 265 456 707 F 265 84.15 580 reject_vc 1 ALIGNMENT 0 YS2-20f19.q1k chrm 260 446 56921 56920 F 187 0.00 446 reject_low 14 ALIGNMENT 106 YS2-20f19.p1k vc_5 224 1 4454 4669 C 224 85.71 580 reject_vc 6 ALIGNMENT 0 YS2-20f19.q1k chrm 446 174 82328 82327 C 273 0.00 446 reject_low 16 ALIGNMENT 0 YS2-20f19.q1k vc_7 62 408 13525 13524 F 347 0.00 446 reject_low 11 ALIGNMENT 104 YS2-20f19.q1k chrm 33 236 12642 12845 F 204 87.25 446 reject_low 12 ALIGNMENT 41 YS2-20f19.q1k vc_4 406 446 5831 5871 F 41 100.00 446 reject_low 10 ALIGNMENT 106 YS2-20f19.p1k vc_2 224 1 1534 1749 C 224 85.71 580 reject_vc 4 ALIGNMENT 41 YS2-20f20.q1k vc_4 307 347 5831 5871 F 41 100.00 347 reject_low 5 ALIGNMENT 0 YS2-20f20.q1k vc_5 308 62 5064 5063 C 247 0.00 347 reject_low 6 ALIGNMENT 0 YS2-20f20.p1k chr14 320 303 119702 119701 C 18 0.00 320 accept_chi 0 ALIGNMENT 41 YS2-20f20.q1k vc_1 347 307 2472 2512 C 41 100.00 347 reject_low 2 ALIGNMENT 0 YS2-20f20.q1k vc_1 306 62 2513 2512 C 245 0.00 347 reject_low 2 ALIGNMENT 38 YS2-20f20.q1k vc_7 310 347 13525 13562 F 38 100.00 347 reject_low 7 ALIGNMENT 41 YS2-20f20.q1k vc_2 347 307 2105 2145 C 41 100.00 347 reject_low 3 ALIGNMENT 36 YS2-20f20.q1k vc_5 344 309 1 36 C 36 100.00 347 reject_low 8 ALIGNMENT 0 YS2-20f20.q1k vc_4 62 306 5831 5830 F 245 0.00 347 reject_low 5 ALIGNMENT 0 YS2-20f20.q1k vc_3 306 62 2513 2512 C 245 0.00 347 reject_low 4 ALIGNMENT 0 YS2-20f20.q1k chr14 307 347 119970 119969 F 41 0.00 347 accept_chi 1 ALIGNMENT 0 YS2-20f20.q1k vc_7 62 309 13525 13524 F 248 0.00 347 reject_low 7 ALIGNMENT 41 YS2-20f20.q1k vc_3 347 307 2472 2512 C 41 100.00 347 reject_low 4 ALIGNMENT 0 YS2-20f20.q1k vc_2 306 62 2146 2145 C 245 0.00 347 reject_low 3 ALIGNMENT 260 YS2-20f20.p1k chr14 302 33 119701 119970 C 270 100.00 320 accept_chi 0 ALIGNMENT 0 YS2-20f20.q1k vc_5 308 62 37 36 C 247 0.00 347 reject_low 8 ALIGNMENT 39 YS2-20f20.q1k vc_5 347 309 5025 5063 C 39 100.00 347 reject_low 6 ALIGNMENT 255 YS2-20f20.q1k chr14 38 306 119701 119970 F 269 99.63 347 accept_chi 1 ALIGNMENT 0 YS2-20f21.q1k chrm 362 631 84597 84760 F 270 0.00 1134 reject_low 14 ALIGNMENT 831 YS2-20f21.q1k chrm 37 1102 49893 50954 F 1066 98.22 1134 accept 0 ALIGNMENT 33 YS2-20f21.q1k chrm 632 673 84761 84801 F 42 97.62 1134 reject_low 14 ALIGNMENT 22 YS2-20f21.q1k chrm 632 677 50769 50818 F 46 84.78 1134 reject_low 18 ALIGNMENT 24 YS2-20f21.q1k chrm 916 860 47956 48007 C 57 87.72 1134 reject_low 17 ALIGNMENT 38 YS2-20f21.q1k chrm 632 696 6191 6255 F 65 87.69 1134 reject_low 4 ALIGNMENT 0 YS2-20f21.q1k chrm 931 917 47957 47956 C 15 0.00 1134 reject_low 17 ALIGNMENT 761 YS2-20f21.p1k chrm 1222 39 50706 51869 C 1184 95.10 1291 accept 0 ALIGNMENT 51 YS2-20f21.q1k chrm 248 308 69047 69106 F 61 96.72 1134 reject_low 9 ALIGNMENT 0 YS2-20f21.q1k chrm 62 248 46309 46308 F 187 0.00 1134 reject_low 18 ALIGNMENT 43 YS2-20f21.q1k chrm 249 296 46309 46356 F 48 97.92 1134 reject_low 18 ALIGNMENT 0 YS2-20f21.q1k chrm 931 300 2750 2749 C 632 0.00 1134 reject_low 10 ALIGNMENT 45 YS2-20f21.q1k chrm 184 296 48034 48143 F 113 84.07 1134 reject_low 1 ALIGNMENT 52 YS2-20f21.q1k chrm 234 316 69422 69505 F 83 90.36 1134 reject_low 7 ALIGNMENT 0 YS2-20f21.q1k chrm 62 248 2089 2088 F 187 0.00 1134 reject_low 13 ALIGNMENT 0 YS2-20f21.q1k chrm 245 62 2803 2802 C 184 0.00 1134 reject_low 10 ALIGNMENT 0 YS2-20f21.q1k chrm 248 62 133 132 C 187 0.00 1134 reject_low 5 ALIGNMENT 0 YS2-20f21.q1k chrm 297 631 46357 50768 F 335 0.00 1134 reject_low 18 ALIGNMENT 0 YS2-20f21.q1k chrm 703 931 2671 2670 F 229 0.00 1134 reject_low 13 ALIGNMENT 26 YS2-20f21.q1k chrm 910 1032 84761 84875 F 123 78.86 1134 reject_low 12 ALIGNMENT 0 YS2-20f21.q1k chrm 931 365 15 14 C 567 0.00 1134 reject_low 5 ALIGNMENT 0 YS2-20f21.q1k chrm 681 909 81392 84760 F 229 0.00 1134 reject_low 12 ALIGNMENT 0 YS2-20f21.q1k chrm 931 913 83917 83916 C 19 0.00 1134 reject_low 11 ALIGNMENT 37 YS2-20f21.q1k chrm 867 962 2552 2645 F 96 85.42 1134 reject_low 3 ALIGNMENT 49 YS2-20f21.q1k chrm 233 361 84466 84596 F 129 85.27 1134 reject_low 14 ALIGNMENT 39 YS2-20f21.q1k chrm 692 623 66977 67045 C 70 87.14 1134 reject_low 2 ALIGNMENT 34 YS2-20f21.q1k chrm 364 249 14 132 C 116 83.62 1134 reject_low 5 ALIGNMENT 0 YS2-20f21.q1k chrm 62 866 2552 2551 F 805 0.00 1134 reject_low 3 ALIGNMENT 0 YS2-20f21.q1k chrm 62 234 9013 9012 F 173 0.00 1134 reject_low 8 ALIGNMENT 0 YS2-20f21.p1k chrm 801 62 51117 51116 C 740 0.00 1291 reject_low 1 ALIGNMENT 40 YS2-20f21.q1k chrm 859 924 68604 68673 F 66 90.91 1134 reject_low 16 ALIGNMENT 46 YS2-20f21.q1k chrm 235 296 66806 66868 F 62 91.94 1134 reject_low 16 ALIGNMENT 0 YS2-20f21.q1k chrm 860 62 83970 83969 C 799 0.00 1134 reject_low 11 ALIGNMENT 33 YS2-20f21.q1k chrm 625 680 81334 81391 F 56 87.50 1134 reject_low 12 ALIGNMENT 0 YS2-20f21.q1k chrm 859 332 48008 52295 C 528 0.00 1134 reject_low 17 ALIGNMENT 0 YS2-20f21.q1k chrm 62 234 66806 66805 F 173 0.00 1134 reject_low 16 ALIGNMENT 54 YS2-20f21.q1k chrm 321 234 9467 9551 C 88 90.91 1134 reject_low 6 ALIGNMENT 0 YS2-20f21.q1k chrm 62 247 69047 69046 F 186 0.00 1134 reject_low 9 ALIGNMENT 0 YS2-20f21.q1k chrm 674 931 84801 84800 F 258 0.00 1134 reject_low 14 ALIGNMENT 0 YS2-20f21.q1k chrm 678 931 50818 50817 F 254 0.00 1134 reject_low 18 ALIGNMENT 49 YS2-20f21.q1k chrm 632 702 2599 2671 F 71 90.14 1134 reject_low 13 ALIGNMENT 0 YS2-20f21.q1k chrm 62 624 81334 81333 F 563 0.00 1134 reject_low 12 ALIGNMENT 0 YS2-20f21.q1k chrm 931 693 66978 66977 C 239 0.00 1134 reject_low 2 ALIGNMENT 0 YS2-20f21.q1k chrm 233 62 9552 9551 C 172 0.00 1134 reject_low 6 ALIGNMENT 53 YS2-20f21.q1k chrm 235 298 9013 9075 F 64 95.31 1134 reject_low 8 ALIGNMENT 45 YS2-20f21.q1k chrm 867 971 84193 84292 F 105 86.67 1134 reject_low 15 ALIGNMENT 43 YS2-20f21.q1k chrm 249 296 2089 2136 F 48 97.92 1134 reject_low 13 ALIGNMENT 0 YS2-20f21.q1k chrm 931 322 9468 9467 C 610 0.00 1134 reject_low 6 ALIGNMENT 0 YS2-20f21.q1k chrm 62 232 84466 84465 F 171 0.00 1134 reject_low 14 ALIGNMENT 0 YS2-20f21.q1k chrm 622 62 67046 67045 C 561 0.00 1134 reject_low 2 ALIGNMENT 0 YS2-20f21.q1k chrm 317 931 69505 69504 F 615 0.00 1134 reject_low 7 ALIGNMENT 0 YS2-20f21.q1k chrm 697 931 6255 6254 F 235 0.00 1134 reject_low 4 ALIGNMENT 0 YS2-20f21.q1k chrm 62 233 69422 69421 F 172 0.00 1134 reject_low 7 ALIGNMENT 0 YS2-20f21.q1k chrm 297 631 2137 2598 F 335 0.00 1134 reject_low 13 ALIGNMENT 0 YS2-20f21.q1k chrm 297 858 66869 68603 F 562 0.00 1134 reject_low 16 ALIGNMENT 0 YS2-20f21.q1k chrm 299 931 9075 9074 F 633 0.00 1134 reject_low 8 ALIGNMENT 0 YS2-20f21.q1k chrm 313 866 81460 84192 F 554 0.00 1134 reject_low 15 ALIGNMENT 0 YS2-20f21.q1k chrm 62 254 81404 81403 F 193 0.00 1134 reject_low 15 ALIGNMENT 42 YS2-20f21.q1k chrm 255 312 81404 81459 F 58 94.83 1134 reject_low 15 ALIGNMENT 20 YS2-20f21.q1k chrm 931 970 50504 50541 F 40 87.50 1134 reject_low 1 ALIGNMENT 241 YS2-20f21.p1k chrm 1291 802 50634 51116 C 490 88.16 1291 reject_low 1 ALIGNMENT 23 YS2-20f21.q1k chrm 912 861 83916 83969 C 52 84.62 1134 reject_low 11 ALIGNMENT 0 YS2-20f21.q1k chrm 246 62 52383 52382 C 185 0.00 1134 reject_low 17 ALIGNMENT 47 YS2-20f21.q1k chrm 331 247 52296 52382 C 85 89.41 1134 reject_low 17 ALIGNMENT 0 YS2-20f21.q1k chrm 62 183 48034 48033 F 122 0.00 1134 reject_low 1 ALIGNMENT 53 YS2-20f21.q1k chrm 299 246 2749 2802 C 54 100.00 1134 reject_low 10 ALIGNMENT 0 YS2-20f21.q1k chrm 62 631 6191 6190 F 570 0.00 1134 reject_low 4 ALIGNMENT 0 YS2-20f21.q1k chrm 297 930 48144 50503 F 634 0.00 1134 reject_low 1 ALIGNMENT 0 YS2-20f21.q1k chrm 309 931 69106 69105 F 623 0.00 1134 reject_low 9 ALIGNMENT 0 YS2-20f22.p1k chr01 468 491 141359 141382 F 24 0.00 1270 reject_low 1 ALIGNMENT 987 YS2-20f22.q1k chr10 40 1124 379645 380731 F 1085 97.79 1128 accept 0 ALIGNMENT 76 YS2-20f22.p1k chr01 50 467 140941 141358 F 418 73.21 1270 reject_low 1 ALIGNMENT 1062 YS2-20f22.p1k chr10 1257 36 380669 381895 C 1222 95.91 1270 accept 0 ALIGNMENT 0 YS2-20f22.p1k chr01 530 848 141420 141419 F 319 0.00 1270 reject_low 1 ALIGNMENT 21 YS2-20f22.p1k chr01 492 529 141383 141420 F 38 86.84 1270 reject_low 1 ALIGNMENT 967 YS2-20f23.q1k chr13 33 1133 224914 226000 F 1101 97.18 1166 accept 0 ALIGNMENT 999 YS2-20f23.p1k chr13 1149 39 225310 226441 C 1111 97.66 1253 accept 0 ALIGNMENT 0 YS2-20f23.p1k chr04 201 848 1355236 1355235 F 648 0.00 1253 reject_low 1 ALIGNMENT 135 YS2-20f23.p1k chr04 39 200 1355075 1355236 F 162 95.06 1253 reject_low 1 ALIGNMENT 1051 YS2-20f24.q1k chr16 41 1173 112047 113177 F 1133 97.88 1177 accept 0 ALIGNMENT 1029 YS2-20f24.p1k chr16 1200 36 112065 113222 C 1165 96.14 1319 accept 0 ALIGNMENT 236 YS2-20g01.p1k vc_4 755 1105 5871 6219 F 351 90.31 1342 reject_low 8 ALIGNMENT 0 YS2-20g01.p1k vc_7 62 754 13562 13561 F 693 0.00 1342 reject_low 7 ALIGNMENT 20 YS2-20g01.p1k vc_2 20 43 2126 2149 F 24 91.67 1342 reject_low 10 ALIGNMENT 260 YS2-20g01.p1k vc_2 1283 755 1587 2105 C 529 85.26 1342 reject_low 3 ALIGNMENT 0 YS2-20g01.p1k vc_2 754 62 2106 2105 C 693 0.00 1342 reject_low 3 ALIGNMENT 0 YS2-20g01.p1k vc_7 62 754 100 99 F 693 0.00 1342 reject_low 6 ALIGNMENT 260 YS2-20g01.p1k vc_7 755 1283 13562 14080 F 529 85.26 1342 reject_low 7 ALIGNMENT 260 YS2-20g01.p1k vc_7 755 1283 100 618 F 529 85.26 1342 reject_low 6 ALIGNMENT 0 YS2-20g01.p1k vc_3 754 62 2106 2105 C 693 0.00 1342 reject_low 4 ALIGNMENT 0 YS2-20g01.p1k chr16 737 812 186763 186762 F 76 0.00 1342 accept_chi 0 ALIGNMENT 666 YS2-20g01.p1k chr16 42 736 186069 186763 F 695 99.28 1342 accept_chi 0 ALIGNMENT 662 YS2-20g01.q1k chr16 735 40 186068 186763 C 696 98.99 736 accept_chi 1 ALIGNMENT 260 YS2-20g01.p1k vc_1 1283 755 1587 2105 C 529 85.26 1342 reject_low 2 ALIGNMENT 20 YS2-20g01.p1k vc_4 43 20 5827 5850 C 24 91.67 1342 reject_low 12 ALIGNMENT 0 YS2-20g01.p1k vc_1 44 812 2516 2515 F 769 0.00 1342 reject_low 9 ALIGNMENT 0 YS2-20g01.p1k vc_1 754 62 2106 2105 C 693 0.00 1342 reject_low 2 ALIGNMENT 20 YS2-20g01.p1k vc_1 20 43 2493 2516 F 24 91.67 1342 reject_low 9 ALIGNMENT 0 YS2-20g01.p1k vc_4 62 754 5871 5870 F 693 0.00 1342 reject_low 8 ALIGNMENT 0 YS2-20g01.p1k vc_1 812 786 2442 2441 C 27 0.00 1342 reject_low 13 ALIGNMENT 260 YS2-20g01.p1k vc_3 1283 755 1587 2105 C 529 85.26 1342 reject_low 4 ALIGNMENT 0 YS2-20g01.p1k vc_3 44 812 2516 2515 F 769 0.00 1342 reject_low 11 ALIGNMENT 20 YS2-20g01.p1k vc_3 20 43 2493 2516 F 24 91.67 1342 reject_low 11 ALIGNMENT 260 YS2-20g01.p1k vc_5 1283 755 4507 5025 C 529 85.26 1342 reject_low 5 ALIGNMENT 26 YS2-20g01.p1k vc_1 785 755 2441 2472 C 31 96.77 1342 reject_low 13 ALIGNMENT 0 YS2-20g01.p1k vc_1 754 62 2473 2472 C 693 0.00 1342 reject_low 13 ALIGNMENT 0 YS2-20g01.p1k vc_2 44 812 2149 2148 F 769 0.00 1342 reject_low 10 ALIGNMENT 0 YS2-20g01.p1k vc_4 812 44 5828 5827 C 769 0.00 1342 reject_low 12 ALIGNMENT 26 YS2-20g01.p1k vc_3 785 755 2441 2472 C 31 96.77 1342 reject_low 14 ALIGNMENT 0 YS2-20g01.p1k vc_5 754 62 5026 5025 C 693 0.00 1342 reject_low 5 ALIGNMENT 0 YS2-20g01.p1k vc_3 754 62 2473 2472 C 693 0.00 1342 reject_low 14 ALIGNMENT 0 YS2-20g01.p1k vc_3 812 786 2442 2441 C 27 0.00 1342 reject_low 14 ALIGNMENT 490 YS2-20g02.q1k chr06 40 1002 186231 187196 F 963 84.53 1204 reject_bad_break 0 ALIGNMENT 791 YS2-20g02.p1k chr06 1278 157 190377 191510 C 1122 92.42 1347 reject_bad_break 0 ALIGNMENT 21 YS2-20g02.p1k chr06 102 33 191555 191625 C 70 77.14 1347 reject_bad_break 0 ALIGNMENT 0 YS2-20g02.p1k chr06 156 103 191511 191554 C 54 0.00 1347 reject_bad_break 0 ALIGNMENT 991 YS2-20g03.p1k chr12 1156 32 463689 464821 C 1125 96.98 1453 accept 1 ALIGNMENT 991 YS2-20g03.p1k chr12 1156 32 454552 455684 C 1125 96.98 1453 accept 0 ALIGNMENT 299 YS2-20g04.q1k chr04 765 201 222423 222986 C 565 85.13 1257 accept 0 ALIGNMENT 39 YS2-20g05.q1k vc_5 311 273 5025 5063 C 39 100.00 311 reject_low 4 ALIGNMENT 41 YS2-20g05.q1k vc_4 271 311 5831 5871 F 41 100.00 311 reject_low 3 ALIGNMENT 0 YS2-20g05.q1k vc_4 62 270 5831 5830 F 209 0.00 311 reject_low 3 ALIGNMENT 0 YS2-20g05.q1k vc_1 270 62 2513 2512 C 209 0.00 311 reject_low 1 ALIGNMENT 0 YS2-20g05.q1k vc_7 62 273 13525 13524 F 212 0.00 311 reject_low 5 ALIGNMENT 38 YS2-20g05.q1k vc_7 274 311 13525 13562 F 38 100.00 311 reject_low 5 ALIGNMENT 36 YS2-20g05.q1k vc_5 308 273 1 36 C 36 100.00 311 reject_low 6 ALIGNMENT 0 YS2-20g05.q1k vc_5 272 62 5064 5063 C 211 0.00 311 reject_low 4 ALIGNMENT 41 YS2-20g05.q1k vc_1 311 271 2472 2512 C 41 100.00 311 reject_low 1 ALIGNMENT 0 YS2-20g05.q1k vc_5 272 62 37 36 C 211 0.00 311 reject_low 6 ALIGNMENT 0 YS2-20g05.q1k vc_3 270 62 2513 2512 C 209 0.00 311 reject_low 2 ALIGNMENT 0 YS2-20g05.q1k chr11 311 274 398641 398640 C 38 0.00 311 accept 0 ALIGNMENT 215 YS2-20g05.q1k chr11 273 37 398640 398876 C 237 97.47 311 accept 0 ALIGNMENT 41 YS2-20g05.q1k vc_3 311 271 2472 2512 C 41 100.00 311 reject_low 2 ALIGNMENT 979 YS2-20g08.q1k chr11 51 1199 255379 256522 F 1149 96.34 1296 accept_chi 1 ALIGNMENT 1036 YS2-20g08.p1k chr12 40 1231 337803 338993 F 1192 96.48 1395 accept_chi 0 ALIGNMENT 258 YS2-20g09.p1k chr16 466 166 606444 606744 C 301 96.01 1561 accept 0 ALIGNMENT 990 YS2-20g09.q1k chr16 39 1168 601804 602934 F 1130 97.79 1217 accept 0 ALIGNMENT 963 YS2-20g10.p1k chr10 27 1190 429060 430210 F 1164 95.62 1413 accept 0 ALIGNMENT 967 YS2-20g10.q1k chr10 1150 39 431969 433098 C 1112 97.57 1248 accept 0 ALIGNMENT 990 YS2-20g11.q1k chr07 1148 39 1042925 1044031 C 1110 97.57 1195 accept 0 ALIGNMENT 786 YS2-20g11.p1k chr07 33 971 1040833 1041766 F 939 96.49 1378 accept 0 ALIGNMENT 0 YS2-20g11.q1k chr13 62 259 239354 239353 F 198 0.00 1195 reject_low 1 ALIGNMENT 0 YS2-20g11.q1k chr15 299 872 355119 355118 F 574 0.00 1195 reject_low 2 ALIGNMENT 0 YS2-20g11.q1k chr13 299 872 239392 239391 F 574 0.00 1195 reject_low 1 ALIGNMENT 21 YS2-20g11.q1k chr15 262 298 355083 355119 F 37 97.30 1195 reject_low 2 ALIGNMENT 0 YS2-20g11.q1k chr15 62 261 355083 355082 F 200 0.00 1195 reject_low 2 ALIGNMENT 22 YS2-20g11.q1k chr13 260 298 239354 239392 F 39 97.44 1195 reject_low 1 ALIGNMENT 446 YS2-20g12.p1k chr12 119 840 466330 467048 F 722 88.50 1509 manual 1 ALIGNMENT 431 YS2-20g12.p1k chr12 168 952 457243 458020 F 785 86.75 1509 manual 0 ALIGNMENT 0 YS2-20g13.q1k chr07 62 172 731140 731139 F 111 0.00 1169 reject_low 9 ALIGNMENT 0 YS2-20g13.q1k chr12 62 92 168313 168312 F 31 0.00 1169 reject_low 5 ALIGNMENT 0 YS2-20g13.q1k chr14 257 857 632682 632681 F 601 0.00 1169 reject_low 10 ALIGNMENT 0 YS2-20g13.q1k chr16 62 174 810672 810671 F 113 0.00 1169 reject_low 12 ALIGNMENT 75 YS2-20g13.q1k chr06 255 175 137474 137554 C 81 97.53 1169 reject_low 11 ALIGNMENT 0 YS2-20g13.q1k chr14 62 174 632601 632600 F 113 0.00 1169 reject_low 10 ALIGNMENT 77 YS2-20g13.q1k chr03 175 257 127713 127795 F 83 97.59 1169 reject_low 8 ALIGNMENT 0 YS2-20g13.q1k chr03 258 857 127795 127794 F 600 0.00 1169 reject_low 8 ALIGNMENT 0 YS2-20g13.q1k chr06 174 62 137555 137554 C 113 0.00 1169 reject_low 11 ALIGNMENT 0 YS2-20g13.q1k chr15 62 173 487439 487438 F 112 0.00 1169 reject_low 6 ALIGNMENT 73 YS2-20g13.q1k chr16 175 256 810672 810753 F 82 96.34 1169 reject_low 12 ALIGNMENT 0 YS2-20g13.q1k chr14 857 162 726234 726233 C 696 0.00 1169 reject_low 3 ALIGNMENT 44 YS2-20g13.q1k chr04 93 159 651432 651498 F 67 89.55 1169 reject_low 4 ALIGNMENT 0 YS2-20g13.q1k chr12 857 266 975963 975962 C 592 0.00 1169 reject_low 2 ALIGNMENT 0 YS2-20g13.q1k chr12 172 62 976055 976054 C 111 0.00 1169 reject_low 2 ALIGNMENT 866 YS2-20g13.p1k chr14 1087 33 106995 108035 C 1055 95.64 1330 accept 0 ALIGNMENT 0 YS2-20g13.q1k chr11 62 173 74628 74627 F 112 0.00 1169 reject_low 7 ALIGNMENT 0 YS2-20g13.q1k chr04 160 857 651498 651497 F 698 0.00 1169 reject_low 4 ALIGNMENT 76 YS2-20g13.q1k chr07 173 251 731140 731218 F 79 98.73 1169 reject_low 9 ALIGNMENT 0 YS2-20g13.q1k chr14 92 62 726302 726301 C 31 0.00 1169 reject_low 3 ALIGNMENT 960 YS2-20g13.q1k chr14 52 1158 102592 103715 F 1107 96.93 1169 accept 0 ALIGNMENT 0 YS2-20g13.q1k chr15 62 161 228316 228315 F 100 0.00 1169 reject_low 1 ALIGNMENT 78 YS2-20g13.q1k chr11 174 257 74628 74711 F 84 97.62 1169 reject_low 7 ALIGNMENT 79 YS2-20g13.q1k chr15 162 257 228316 228410 F 96 94.79 1169 reject_low 1 ALIGNMENT 86 YS2-20g13.q1k chr12 265 173 975962 976054 C 93 97.85 1169 reject_low 2 ALIGNMENT 0 YS2-20g13.q1k chr06 857 256 137475 137474 C 602 0.00 1169 reject_low 11 ALIGNMENT 0 YS2-20g13.q1k chr04 62 92 651432 651431 F 31 0.00 1169 reject_low 4 ALIGNMENT 0 YS2-20g13.q1k chr03 62 174 127713 127712 F 113 0.00 1169 reject_low 8 ALIGNMENT 0 YS2-20g13.q1k chr15 259 857 487523 487522 F 599 0.00 1169 reject_low 6 ALIGNMENT 0 YS2-20g13.q1k chr07 252 857 731218 731217 F 606 0.00 1169 reject_low 9 ALIGNMENT 39 YS2-20g13.q1k chr12 93 157 168313 168377 F 65 87.69 1169 reject_low 5 ALIGNMENT 0 YS2-20g13.q1k chr12 158 857 168377 168376 F 700 0.00 1169 reject_low 5 ALIGNMENT 79 YS2-20g13.q1k chr15 174 258 487439 487523 F 85 97.65 1169 reject_low 6 ALIGNMENT 76 YS2-20g13.q1k chr14 175 256 632601 632682 F 82 97.56 1169 reject_low 10 ALIGNMENT 0 YS2-20g13.q1k chr16 257 857 810753 810752 F 601 0.00 1169 reject_low 12 ALIGNMENT 0 YS2-20g13.q1k chr15 258 857 228410 228409 F 600 0.00 1169 reject_low 1 ALIGNMENT 43 YS2-20g13.q1k chr14 161 93 726233 726301 C 69 88.41 1169 reject_low 3 ALIGNMENT 0 YS2-20g13.q1k chr11 258 857 74711 74710 F 600 0.00 1169 reject_low 7 ALIGNMENT 307 YS2-20g15.q1k chr05 586 1084 569450 569949 F 499 89.38 1212 reject_low 9 ALIGNMENT 0 YS2-20g15.q1k chr04 678 62 955 954 C 617 0.00 1212 reject_low 26 ALIGNMENT 1000 YS2-20g15.p1k chr04 1196 45 1528629 1529781 C 1152 96.18 1337 ambiguous_tel 7 ALIGNMENT 637 YS2-20g15.q1k chr10 1105 38 7385 8463 C 1068 88.39 1212 ambiguous_tel 5 ALIGNMENT 1011 YS2-20g15.p1k chr02 45 1196 2698 3851 F 1152 96.53 1337 ambiguous_tel 2 ALIGNMENT 0 YS2-20g15.q1k chr02 62 678 812323 812322 F 617 0.00 1212 reject_low 27 ALIGNMENT 1000 YS2-20g15.p1k chr14 45 1196 2281 3433 F 1152 96.18 1337 reject_low 12 ALIGNMENT 617 YS2-20g15.q1k chr12 38 1046 1063581 1064595 F 1009 88.50 1212 ambiguous_tel 3,6 ALIGNMENT 714 YS2-20g15.q1k chr12 1105 38 11706 12778 C 1068 90.82 1212 ambiguous_tel 0,1 ALIGNMENT 0 YS2-20g15.q1k chr11 593 730 665549 665542 F 138 0.00 1212 reject_low 28 ALIGNMENT 285 YS2-20g15.q1k chr03 1090 651 737 1178 C 440 90.91 1212 reject_low 23 ALIGNMENT 213 YS2-20g15.q1k chr11 731 1090 665543 665905 F 360 89.72 1212 reject_low 28 ALIGNMENT 1000 YS2-20g15.p1k chr05 1196 45 573458 574610 C 1152 96.18 1337 reject_low 9 ALIGNMENT 0 YS2-20g15.q1k chr10 62 678 744767 744766 F 617 0.00 1212 reject_low 25 ALIGNMENT 150 YS2-20g15.q1k chr15 231 38 11052 11246 C 194 93.30 1212 reject_low 24 ALIGNMENT 1003 YS2-20g15.p1k chr12 45 1196 8033 9185 F 1152 96.27 1337 ambiguous_tel 1 ALIGNMENT 998 YS2-20g15.p1k chr06 47 1196 1537 2687 F 1150 96.17 1337 reject_low 16 ALIGNMENT 323 YS2-20g15.q1k chr15 1105 539 469 1039 C 567 87.83 1212 reject_low 22 ALIGNMENT 0 YS2-20g15.q1k chr15 538 62 1040 1039 C 477 0.00 1212 reject_low 22 ALIGNMENT 640 YS2-20g15.q1k chr09 1105 38 7402 8480 C 1068 88.48 1212 ambiguous_tel 4 ALIGNMENT 0 YS2-20g15.q1k chr11 62 350 665307 665306 F 289 0.00 1212 reject_low 28 ALIGNMENT 1011 YS2-20g15.p1k chr08 1196 45 558980 560133 C 1152 96.53 1337 reject_low 14 ALIGNMENT 0 YS2-20g15.q1k chr05 62 585 569450 569449 F 524 0.00 1212 reject_low 9 ALIGNMENT 0 YS2-20g15.q1k chr15 891 232 11053 11052 C 660 0.00 1212 reject_low 24 ALIGNMENT 21 YS2-20g15.q1k chr16 260 191 7417 7485 C 70 80.00 1212 reject_low 18 ALIGNMENT 0 YS2-20g15.q1k chr14 679 62 7479 7478 C 618 0.00 1212 reject_low 12 ALIGNMENT 987 YS2-20g15.p1k chr05 47 1261 2347 3567 F 1215 94.57 1337 reject_low 8 ALIGNMENT 285 YS2-20g15.q1k chr16 1105 535 6844 7420 C 571 85.46 1212 reject_low 18 ALIGNMENT 1000 YS2-20g15.p1k chr12 1196 45 1074830 1075982 C 1152 96.18 1337 ambiguous_tel 6 ALIGNMENT 0 YS2-20g15.q1k chr15 62 534 1083721 1083720 F 473 0.00 1212 reject_low 10 ALIGNMENT 229 YS2-20g15.q1k chr10 679 1105 744767 745196 F 427 87.59 1212 reject_low 25 ALIGNMENT 998 YS2-20g15.p1k chr13 47 1196 2376 3526 F 1150 96.17 1337 reject_low 17 ALIGNMENT 45 YS2-20g15.q1k chr16 129 52 7531 7611 C 78 87.18 1212 reject_low 18 ALIGNMENT 959 YS2-20g15.p1k chr08 47 1196 2228 3382 F 1150 95.13 1337 reject_low 13 ALIGNMENT 1003 YS2-20g15.p1k chr12 1196 45 1068167 1069319 C 1152 96.27 1337 ambiguous_tel 3 ALIGNMENT 242 YS2-20g15.q1k chr07 679 1090 1083590 1084001 F 412 88.83 1212 reject_low 11 ALIGNMENT 285 YS2-20g15.q1k chr15 535 1105 1083721 1084297 F 571 85.64 1212 reject_low 10 ALIGNMENT 0 YS2-20g15.q1k chr08 679 62 5555 5554 C 618 0.00 1212 reject_low 13 ALIGNMENT 208 YS2-20g15.q1k chr11 351 592 665307 665548 F 242 95.87 1212 reject_low 28 ALIGNMENT 702 YS2-20g15.q1k chr14 38 1046 782585 783595 F 1009 91.18 1212 reject_low 19 ALIGNMENT 223 YS2-20g15.q1k chr02 679 1105 812323 812753 F 427 86.65 1212 reject_low 27 ALIGNMENT 1003 YS2-20g15.p1k chr12 45 1196 2498 3650 F 1152 96.27 1337 ambiguous_tel 0 ALIGNMENT 1000 YS2-20g15.p1k chr07 1196 45 1087535 1088687 C 1152 96.18 1337 reject_low 11 ALIGNMENT 991 YS2-20g15.p1k chr09 45 1196 2669 3821 F 1152 95.92 1337 ambiguous_tel 4 ALIGNMENT 0 YS2-20g15.q1k chr16 190 130 7486 7530 C 61 0.00 1212 reject_low 18 ALIGNMENT 660 YS2-20g15.q1k chr02 1105 38 6222 7300 C 1068 89.23 1212 ambiguous_tel 2 ALIGNMENT 992 YS2-20g15.p1k chr10 47 1196 2654 3804 F 1150 96.00 1337 ambiguous_tel 5 ALIGNMENT 1000 YS2-20g15.p1k chr15 1196 45 1087794 1088946 C 1152 96.18 1337 reject_low 10 ALIGNMENT 601 YS2-20g15.q1k chr04 41 1105 1523911 1524992 F 1065 87.14 1212 ambiguous_tel 7 ALIGNMENT 696 YS2-20g15.q1k chr11 1090 38 449 1501 C 1053 90.31 1212 reject_low 20 ALIGNMENT 1003 YS2-20g15.p1k chr16 1196 45 944527 945679 C 1152 96.27 1337 reject_low 15 ALIGNMENT 0 YS2-20g15.q1k chr03 650 62 1179 1178 C 589 0.00 1212 reject_low 23 ALIGNMENT 230 YS2-20g15.q1k chr08 1090 680 5136 5554 C 411 88.32 1212 reject_low 13 ALIGNMENT 639 YS2-20g15.q1k chr01 1090 38 433 1497 C 1053 88.51 1212 reject_low 21 ALIGNMENT 225 YS2-20g15.q1k chr04 1105 679 524 954 C 427 87.12 1212 reject_low 26 ALIGNMENT 0 YS2-20g15.q1k chr16 534 261 7421 7416 C 274 0.00 1212 reject_low 18 ALIGNMENT 0 YS2-20g15.q1k chr07 62 678 1083590 1083589 F 617 0.00 1212 reject_low 11 ALIGNMENT 1000 YS2-20g15.p1k chr16 45 1196 2190 3342 F 1152 96.18 1337 reject_low 18 ALIGNMENT 239 YS2-20g15.q1k chr14 1046 680 7111 7478 C 367 91.28 1212 reject_low 12 ALIGNMENT 964 YS2-20g16.p1k chr11 43 1221 75295 76481 F 1179 94.83 1380 accept 0 ALIGNMENT 1019 YS2-20g16.q1k chr11 1272 36 76333 77565 C 1237 95.15 1283 accept 0 ALIGNMENT 227 YS2-20g17.p1k chr02 447 30 717216 717621 C 418 87.08 1497 accept 0 ALIGNMENT 991 YS2-20g17.q1k chr02 38 1205 714534 715704 F 1168 96.06 1208 accept 0 ALIGNMENT 1004 YS2-20g18.p1k chr04 1215 40 152523 153711 C 1176 96.00 1356 accept 0 ALIGNMENT 1023 YS2-20g18.q1k chr04 41 1233 149212 150403 F 1193 95.98 1275 accept 0 ALIGNMENT 74 YS2-20g19.p1k chr03 110 183 82460 82533 F 74 100.00 1303 reject_low 15 ALIGNMENT 0 YS2-20g19.p1k chr05 108 62 177172 177171 C 47 0.00 1303 reject_low 14 ALIGNMENT 0 YS2-20g19.p1k chr07 819 192 541846 541845 C 628 0.00 1303 reject_low 5 ALIGNMENT 0 YS2-20g19.p1k chr07 62 103 401523 401522 F 42 0.00 1303 reject_low 7 ALIGNMENT 76 YS2-20g19.p1k chr11 110 185 141022 141097 F 76 100.00 1303 reject_low 13 ALIGNMENT 0 YS2-20g19.p1k chr10 189 819 116011 116010 F 631 0.00 1303 reject_low 4 ALIGNMENT 0 YS2-20g19.p1k chr12 819 183 797179 797178 C 637 0.00 1303 reject_low 2 ALIGNMENT 0 YS2-20g19.p1k chr13 819 188 290796 290795 C 632 0.00 1303 reject_low 12 ALIGNMENT 0 YS2-20g19.p1k chr07 109 62 541927 541926 C 48 0.00 1303 reject_low 5 ALIGNMENT 76 YS2-20g19.p1k chr02 188 110 645156 645234 C 79 98.73 1303 reject_low 11 ALIGNMENT 0 YS2-20g19.p1k chr07 109 62 328659 328658 C 48 0.00 1303 reject_low 9 ALIGNMENT 75 YS2-20g19.p1k chr13 187 110 290795 290872 C 78 98.72 1303 reject_low 12 ALIGNMENT 74 YS2-20g19.p1k chr16 110 189 210190 210269 F 80 97.50 1303 reject_low 10 ALIGNMENT 78 YS2-20g19.p1k chr05 189 109 354923 355003 C 81 98.77 1303 reject_low 6 ALIGNMENT 75 YS2-20g19.p1k chr05 183 109 177097 177171 C 75 100.00 1303 reject_low 14 ALIGNMENT 0 YS2-20g19.p1k chr16 190 819 210269 210268 F 630 0.00 1303 reject_low 10 ALIGNMENT 0 YS2-20g19.p1k chr05 186 819 487400 487399 F 634 0.00 1303 reject_low 8 ALIGNMENT 0 YS2-20g19.p1k chr14 758 819 604264 604263 F 62 0.00 1303 reject_low 1 ALIGNMENT 74 YS2-20g19.p1k chr12 182 92 797178 797269 C 91 94.51 1303 reject_low 2 ALIGNMENT 0 YS2-20g19.p1k chr03 184 819 82533 82532 F 636 0.00 1303 reject_low 15 ALIGNMENT 0 YS2-20g19.p1k chr11 62 109 141022 141021 F 48 0.00 1303 reject_low 13 ALIGNMENT 0 YS2-20g19.p1k chr11 186 819 141097 141096 F 634 0.00 1303 reject_low 13 ALIGNMENT 0 YS2-20g19.p1k chr03 62 109 82460 82459 F 48 0.00 1303 reject_low 15 ALIGNMENT 0 YS2-20g19.p1k chr12 91 62 797270 797269 C 30 0.00 1303 reject_low 2 ALIGNMENT 0 YS2-20g19.p1k chr16 62 109 210190 210189 F 48 0.00 1303 reject_low 10 ALIGNMENT 61 YS2-20g19.p1k chr09 184 91 197587 197682 C 94 89.36 1303 reject_low 3 ALIGNMENT 74 YS2-20g19.p1k chr07 189 110 328579 328658 C 80 97.50 1303 reject_low 9 ALIGNMENT 0 YS2-20g19.p1k chr07 819 190 328580 328579 C 630 0.00 1303 reject_low 9 ALIGNMENT 21 YS2-20g19.p1k chr14 730 757 604237 604264 F 28 100.00 1303 reject_low 1 ALIGNMENT 0 YS2-20g19.p1k chr05 108 62 355004 355003 C 47 0.00 1303 reject_low 6 ALIGNMENT 0 YS2-20g19.p1k chr09 90 62 197683 197682 C 29 0.00 1303 reject_low 3 ALIGNMENT 0 YS2-20g19.p1k chr02 109 62 645235 645234 C 48 0.00 1303 reject_low 11 ALIGNMENT 0 YS2-20g19.p1k chr05 819 184 177098 177097 C 636 0.00 1303 reject_low 14 ALIGNMENT 76 YS2-20g19.p1k chr07 191 110 541845 541926 C 82 97.56 1303 reject_low 5 ALIGNMENT 0 YS2-20g19.p1k chr05 62 107 487323 487322 F 46 0.00 1303 reject_low 8 ALIGNMENT 0 YS2-20g19.p1k chr10 62 103 115927 115926 F 42 0.00 1303 reject_low 4 ALIGNMENT 988 YS2-20g19.p1k chr09 1296 41 369302 370554 C 1256 94.35 1303 accept 0 ALIGNMENT 0 YS2-20g19.p1k chr02 819 189 645157 645156 C 631 0.00 1303 reject_low 11 ALIGNMENT 82 YS2-20g19.p1k chr10 104 188 115927 116011 F 85 98.82 1303 reject_low 4 ALIGNMENT 0 YS2-20g19.p1k chr07 183 819 401601 401600 F 637 0.00 1303 reject_low 7 ALIGNMENT 76 YS2-20g19.p1k chr07 104 182 401523 401601 F 79 98.73 1303 reject_low 7 ALIGNMENT 0 YS2-20g19.p1k chr05 819 190 354924 354923 C 630 0.00 1303 reject_low 6 ALIGNMENT 945 YS2-20g19.q1k chr09 45 1152 366451 367572 F 1108 96.39 1152 accept 0 ALIGNMENT 78 YS2-20g19.p1k chr05 108 185 487323 487400 F 78 100.00 1303 reject_low 8 ALIGNMENT 0 YS2-20g19.p1k chr14 62 729 604237 604236 F 668 0.00 1303 reject_low 1 ALIGNMENT 0 YS2-20g19.p1k chr13 109 62 290873 290872 C 48 0.00 1303 reject_low 12 ALIGNMENT 0 YS2-20g19.p1k chr09 819 185 197588 197587 C 635 0.00 1303 reject_low 3 ALIGNMENT 0 YS2-20g20.q1k chrm 242 312 13987 20504 F 71 0.00 1232 reject_bad_break 0 ALIGNMENT 376 YS2-20g20.p1k chrm 770 37 23263 23994 C 734 86.38 1381 reject_bad_break 0 ALIGNMENT 597 YS2-20g20.q1k chrm 313 1081 20505 21259 F 769 96.62 1232 reject_bad_break 0 ALIGNMENT 177 YS2-20g20.q1k chrm 42 241 13787 13986 F 200 99.50 1232 reject_bad_break 0 ALIGNMENT 979 YS2-20g21.q1k chr08 1111 38 40747 41823 C 1074 97.58 1112 accept 0 ALIGNMENT 61 YS2-20g21.p1k chr08 30 135 40603 40706 F 106 87.74 1316 accept 0 ALIGNMENT 420 YS2-20g21.p1k chr04 994 156 1005473 1006297 C 839 85.10 1316 reject_low 1 ALIGNMENT 884 YS2-20g22.p1k chr08 27 1213 40604 41787 F 1187 93.01 1337 accept 0 ALIGNMENT 978 YS2-20g22.q1k chr08 1135 39 40726 41823 C 1097 97.27 1143 accept 0 ALIGNMENT 1008 YS2-20g23.p1k chr04 1259 43 1005204 1006419 C 1217 95.07 1263 accept 0 ALIGNMENT 975 YS2-20g23.q1k chr04 51 1099 1002319 1003369 F 1049 98.28 1099 accept 0 ALIGNMENT 971 YS2-20g24.p1k chr15 36 1182 142590 143756 F 1147 96.43 1257 accept 0 ALIGNMENT 930 YS2-20g24.q1k chr15 1107 44 142746 143809 C 1064 97.18 1107 accept 0 ALIGNMENT 363 YS2-20h01.p1k chr10 222 961 546651 547385 F 740 84.32 1433 accept 0 ALIGNMENT 1016 YS2-20h02.q1k chr15 1207 38 913758 914919 C 1170 97.52 1208 accept 0 ALIGNMENT 1079 YS2-20h02.p1k chr15 38 1290 911945 913208 F 1253 96.09 1345 accept 0 ALIGNMENT 950 YS2-20h03.p1k chr10 33 1120 705002 706107 F 1088 96.69 1512 accept 0 ALIGNMENT 332 YS2-20h04.p1k vc_1 478 1 1265 1749 C 478 89.96 778 reject_vc 0 ALIGNMENT 332 YS2-20h04.p1k vc_5 478 1 4185 4669 C 478 89.96 778 reject_vc 3 ALIGNMENT 332 YS2-20h04.p1k vc_3 478 1 1265 1749 C 478 89.96 778 reject_vc 2 ALIGNMENT 332 YS2-20h04.p1k vc_2 478 1 1265 1749 C 478 89.96 778 reject_vc 1 ALIGNMENT 332 YS2-20h04.p1k vc_6 1 478 3712 4196 F 478 89.96 778 reject_vc 4 ALIGNMENT 326 YS2-20h04.p1k vc_7 1 478 456 940 F 478 89.54 778 reject_vc 5 ALIGNMENT 326 YS2-20h04.p1k vc_7 1 478 13918 14402 F 478 89.54 778 reject_vc 6 ALIGNMENT 0 YS2-20h05.q1k chrm 435 913 76766 84760 F 479 0.00 1234 reject_low 16 ALIGNMENT 0 YS2-20h05.q1k chrm 62 249 69047 69046 F 188 0.00 1234 reject_low 11 ALIGNMENT 0 YS2-20h05.q1k chrm 301 884 9075 9074 F 584 0.00 1234 reject_low 9 ALIGNMENT 0 YS2-20h05.q1k chrm 633 62 55464 55463 C 572 0.00 1234 reject_low 10 ALIGNMENT 0 YS2-20h05.q1k chrm 62 633 6191 6190 F 572 0.00 1234 reject_low 5 ALIGNMENT 0 YS2-20h05.q1k chrm 299 633 2137 2598 F 335 0.00 1234 reject_low 20 ALIGNMENT 34 YS2-20h05.q1k chrm 862 928 68604 68673 F 67 85.07 1234 reject_low 17 ALIGNMENT 0 YS2-20h05.q1k chrm 680 884 50818 50817 F 205 0.00 1234 reject_low 15 ALIGNMENT 0 YS2-20h05.q1k chrm 884 324 9468 9467 C 561 0.00 1234 reject_low 6 ALIGNMENT 34 YS2-20h05.q1k chrm 366 251 14 132 C 116 83.62 1234 reject_low 7 ALIGNMENT 0 YS2-20h05.q1k chrm 62 870 2552 2551 F 809 0.00 1234 reject_low 2 ALIGNMENT 0 YS2-20h05.q1k chrm 62 206 53779 53778 F 145 0.00 1234 reject_low 1 ALIGNMENT 0 YS2-20h05.q1k chrm 676 884 84801 84800 F 209 0.00 1234 reject_low 18 ALIGNMENT 46 YS2-20h05.q1k chrm 237 298 66806 66868 F 62 91.94 1234 reject_low 17 ALIGNMENT 22 YS2-20h05.q1k chrm 634 679 50769 50818 F 46 84.78 1234 reject_low 15 ALIGNMENT 0 YS2-20h05.q1k chrm 62 633 50769 50768 F 572 0.00 1234 reject_low 15 ALIGNMENT 49 YS2-20h05.q1k chrm 634 704 2599 2671 F 71 90.14 1234 reject_low 20 ALIGNMENT 912 YS2-20h05.q1k chrm 39 1219 49893 51074 F 1181 97.54 1234 accept 0 ALIGNMENT 0 YS2-20h05.q1k chrm 884 678 55422 55421 C 207 0.00 1234 reject_low 10 ALIGNMENT 0 YS2-20h05.q1k chrm 62 234 84466 84465 F 173 0.00 1234 reject_low 18 ALIGNMENT 0 YS2-20h05.q1k chrm 62 236 9013 9012 F 175 0.00 1234 reject_low 9 ALIGNMENT 40 YS2-20h05.q1k chrm 871 965 2552 2647 F 95 84.21 1234 reject_low 2 ALIGNMENT 0 YS2-20h05.q1k chrm 624 62 67046 67045 C 563 0.00 1234 reject_low 3 ALIGNMENT 22 YS2-20h05.q1k chrm 959 935 55423 55447 C 25 100.00 1234 reject_low 19 ALIGNMENT 0 YS2-20h05.q1k chrm 884 316 12254 12253 C 569 0.00 1234 reject_low 13 ALIGNMENT 0 YS2-20h05.q1k chrm 248 62 12319 12318 C 187 0.00 1234 reject_low 13 ALIGNMENT 0 YS2-20h05.q1k chrm 62 235 69422 69421 F 174 0.00 1234 reject_low 8 ALIGNMENT 0 YS2-20h05.q1k chrm 235 62 9552 9551 C 174 0.00 1234 reject_low 6 ALIGNMENT 31 YS2-20h05.q1k chrm 248 434 76586 76765 F 187 81.82 1234 reject_low 16 ALIGNMENT 33 YS2-20h05.q1k chrm 634 675 84761 84801 F 42 97.62 1234 reject_low 18 ALIGNMENT 0 YS2-20h05.q1k chrm 364 633 84597 84760 F 270 0.00 1234 reject_low 18 ALIGNMENT 0 YS2-20h05.q1k chrm 314 884 53882 53881 F 571 0.00 1234 reject_low 1 ALIGNMENT 36 YS2-20h05.q1k chrm 677 634 55421 55463 C 44 97.73 1234 reject_low 10 ALIGNMENT 0 YS2-20h05.q1k chrm 934 922 55448 55495 C 13 0.00 1234 reject_low 19 ALIGNMENT 0 YS2-20h05.q1k chrm 62 250 2089 2088 F 189 0.00 1234 reject_low 20 ALIGNMENT 0 YS2-20h05.q1k chrm 884 367 15 14 C 518 0.00 1234 reject_low 7 ALIGNMENT 0 YS2-20h05.q1k chrm 319 884 69505 69504 F 566 0.00 1234 reject_low 8 ALIGNMENT 0 YS2-20h05.q1k chrm 250 62 133 132 C 189 0.00 1234 reject_low 7 ALIGNMENT 43 YS2-20h05.q1k chrm 251 298 2089 2136 F 48 97.92 1234 reject_low 20 ALIGNMENT 20 YS2-20h05.q1k chrm 921 863 55496 55547 C 59 84.75 1234 reject_low 19 ALIGNMENT 32 YS2-20h05.q1k chrm 914 981 6191 6253 F 68 85.29 1234 reject_low 20 ALIGNMENT 32 YS2-20h05.q1k chrm 691 619 12336 12408 C 73 83.56 1234 reject_low 4 ALIGNMENT 0 YS2-20h05.q1k chrm 884 692 12337 12336 C 193 0.00 1234 reject_low 4 ALIGNMENT 21 YS2-20h05.q1k chrm 914 963 50488 50533 F 50 86.00 1234 reject_low 14 ALIGNMENT 30 YS2-20h05.q1k chrm 914 976 84761 84818 F 63 85.71 1234 reject_low 16 ALIGNMENT 0 YS2-20h05.q1k chrm 705 913 2672 6190 F 209 0.00 1234 reject_low 20 ALIGNMENT 0 YS2-20h05.q1k chrm 311 884 69106 69105 F 574 0.00 1234 reject_low 11 ALIGNMENT 0 YS2-20h05.q1k chrm 884 302 2750 2749 C 583 0.00 1234 reject_low 12 ALIGNMENT 0 YS2-20h05.q1k chrm 299 861 66869 68603 F 563 0.00 1234 reject_low 17 ALIGNMENT 53 YS2-20h05.q1k chrm 301 248 2749 2802 C 54 100.00 1234 reject_low 12 ALIGNMENT 51 YS2-20h05.q1k chrm 250 310 69047 69106 F 61 96.72 1234 reject_low 11 ALIGNMENT 47 YS2-20h05.q1k chrm 315 249 12253 12318 C 67 92.54 1234 reject_low 13 ALIGNMENT 0 YS2-20h05.q1k chrm 62 247 76586 76585 F 186 0.00 1234 reject_low 16 ALIGNMENT 777 YS2-20h05.p1k chrm 1279 37 50640 51869 C 1243 94.85 1450 accept 0 ALIGNMENT 39 YS2-20h05.q1k chrm 694 625 66977 67045 C 70 87.14 1234 reject_low 3 ALIGNMENT 0 YS2-20h05.q1k chrm 884 695 66978 66977 C 190 0.00 1234 reject_low 3 ALIGNMENT 0 YS2-20h05.q1k chrm 699 884 6255 6254 F 186 0.00 1234 reject_low 5 ALIGNMENT 0 YS2-20h05.q1k chrm 62 236 66806 66805 F 175 0.00 1234 reject_low 17 ALIGNMENT 44 YS2-20h05.q1k chrm 207 313 53779 53882 F 107 85.05 1234 reject_low 1 ALIGNMENT 52 YS2-20h05.q1k chrm 236 318 69422 69505 F 83 90.36 1234 reject_low 8 ALIGNMENT 0 YS2-20h05.q1k chrm 62 913 50488 50487 F 852 0.00 1234 reject_low 14 ALIGNMENT 38 YS2-20h05.q1k chrm 634 698 6191 6255 F 65 87.69 1234 reject_low 5 ALIGNMENT 0 YS2-20h05.q1k chrm 247 62 2803 2802 C 186 0.00 1234 reject_low 12 ALIGNMENT 0 YS2-20h05.q1k chrm 618 62 12409 12408 C 557 0.00 1234 reject_low 4 ALIGNMENT 54 YS2-20h05.q1k chrm 323 236 9467 9551 C 88 90.91 1234 reject_low 6 ALIGNMENT 53 YS2-20h05.q1k chrm 237 300 9013 9075 F 64 95.31 1234 reject_low 9 ALIGNMENT 0 YS2-20h05.q1k chrm 862 62 55548 55547 C 801 0.00 1234 reject_low 19 ALIGNMENT 49 YS2-20h05.q1k chrm 235 363 84466 84596 F 129 85.27 1234 reject_low 18 ALIGNMENT 960 YS2-20h06.p1k chr10 1180 31 513475 514647 C 1150 95.83 1383 accept 0 ALIGNMENT 655 YS2-20h06.q1k chr10 39 797 511953 512711 F 759 96.84 1221 accept 0 ALIGNMENT 1097 YS2-20h07.p1k chr09 35 1274 241215 242468 F 1240 96.29 1375 accept 0 ALIGNMENT 556 YS2-20h07.q1k chr09 682 28 243178 243832 C 655 96.49 1255 accept 0 ALIGNMENT 679 YS2-20h08.q1k chr08 811 42 437638 438405 C 770 97.14 1249 accept 0 ALIGNMENT 943 YS2-20h08.p1k chr08 34 1096 432973 434050 F 1063 97.27 1320 accept 0 ALIGNMENT 336 YS2-20h09.q1k chr14 451 49 705822 706218 C 403 96.53 1188 accept 0 ALIGNMENT 1031 YS2-20h09.p1k chr14 38 1210 701220 702404 F 1173 96.08 1361 accept 0 ALIGNMENT 461 YS2-20h11.p1k chr14 30 1052 701230 702256 F 1023 82.80 1409 accept 0 ALIGNMENT 821 YS2-20h12.q1k chr15 31 976 94705 95667 F 946 96.72 1191 accept 0 ALIGNMENT 943 YS2-20h12.p1k chr15 1134 41 99664 100768 C 1094 96.34 1304 accept 0 ALIGNMENT 1012 YS2-20h13.p1k chr04 1194 33 1005249 1006419 C 1162 96.47 1250 accept 0 ALIGNMENT 1029 YS2-20h13.q1k chr04 40 1209 1002319 1003485 F 1170 97.18 1220 accept 0 ALIGNMENT 487 YS2-20h14.q1k chr12 136 629 466859 467352 F 494 100.00 630 reject_low 1 ALIGNMENT 487 YS2-20h14.q1k chr12 136 629 457722 458215 F 494 100.00 630 accept 0 ALIGNMENT 0 YS2-20h14.p1k chr16 623 641 439361 439360 F 19 0.00 641 reject_low 7 ALIGNMENT 95 YS2-20h14.q1k chr10 39 136 201215 201312 F 98 100.00 630 reject_low 6 ALIGNMENT 0 YS2-20h14.p1k chr08 641 623 89284 89283 C 19 0.00 641 reject_low 3 ALIGNMENT 0 YS2-20h14.q1k chr12 62 135 457722 457721 F 74 0.00 630 accept 0 ALIGNMENT 95 YS2-20h14.q1k chr16 136 39 439264 439361 C 98 100.00 630 reject_low 8 ALIGNMENT 482 YS2-20h14.p1k chr12 525 33 466859 467352 C 493 99.80 641 accept 0 ALIGNMENT 0 YS2-20h14.q1k chr12 62 135 466859 466858 F 74 0.00 630 reject_low 1 ALIGNMENT 0 YS2-20h14.p1k chr10 641 623 201216 201215 C 19 0.00 641 reject_low 5 ALIGNMENT 482 YS2-20h14.p1k chr12 525 33 457722 458215 C 493 99.80 641 reject_low 2 ALIGNMENT 0 YS2-20h14.p1k chr12 641 526 466860 466859 C 116 0.00 641 accept 0 ALIGNMENT 0 YS2-20h14.p1k chr12 641 526 457723 457722 C 116 0.00 641 reject_low 2 ALIGNMENT 0 YS2-20h14.p1k chr08 524 62 89381 89380 C 463 0.00 641 reject_low 3 ALIGNMENT 0 YS2-20h14.q1k chr10 137 630 201312 201311 F 494 0.00 630 reject_low 6 ALIGNMENT 0 YS2-20h14.q1k chr08 137 630 89380 89379 F 494 0.00 630 reject_low 4 ALIGNMENT 0 YS2-20h14.p1k chr16 62 524 439264 439263 F 463 0.00 641 reject_low 7 ALIGNMENT 95 YS2-20h14.p1k chr08 622 525 89283 89380 C 98 100.00 641 reject_low 3 ALIGNMENT 95 YS2-20h14.p1k chr10 622 525 201215 201312 C 98 100.00 641 reject_low 5 ALIGNMENT 0 YS2-20h14.p1k chr10 524 62 201313 201312 C 463 0.00 641 reject_low 5 ALIGNMENT 95 YS2-20h14.p1k chr16 525 622 439264 439361 F 98 100.00 641 reject_low 7 ALIGNMENT 95 YS2-20h14.q1k chr08 39 136 89283 89380 F 98 100.00 630 reject_low 4 ALIGNMENT 0 YS2-20h14.q1k chr16 630 137 439265 439264 C 494 0.00 630 reject_low 8 ALIGNMENT 950 YS2-20h15.p1k chr16 1212 29 728191 729392 C 1184 94.43 1317 accept 0 ALIGNMENT 895 YS2-20h15.q1k chr16 37 1081 725102 726152 F 1045 96.08 1260 accept 0 ALIGNMENT 975 YS2-20h16.p1k chr10 43 1153 444731 445856 F 1111 97.30 1299 accept 0 ALIGNMENT 171 YS2-20h16.q1k chr10 297 47 448588 448833 C 251 91.63 1282 accept 0 ALIGNMENT 0 YS2-20h17.q1k vc_1 449 62 2513 2512 C 388 0.00 490 reject_low 4 ALIGNMENT 108 YS2-20h17.p1k vc_3 874 478 1707 2103 C 397 76.57 1476 reject_low 3 ALIGNMENT 41 YS2-20h17.q1k vc_1 490 450 2472 2512 C 41 100.00 490 reject_low 4 ALIGNMENT 41 YS2-20h17.q1k vc_3 490 450 2472 2512 C 41 100.00 490 reject_low 5 ALIGNMENT 0 YS2-20h17.q1k vc_4 62 449 5831 5830 F 388 0.00 490 reject_low 6 ALIGNMENT 0 YS2-20h17.p1k vc_1 477 62 2104 2103 C 416 0.00 1476 reject_low 2 ALIGNMENT 108 YS2-20h17.p1k vc_1 874 478 1707 2103 C 397 76.57 1476 reject_low 2 ALIGNMENT 211 YS2-20h17.p1k chr11 29 365 506221 506547 F 337 90.21 1476 accept_chi 1 ALIGNMENT 0 YS2-20h17.q1k chr11 490 451 506220 506219 C 40 0.00 490 accept_chi 0 ALIGNMENT 0 YS2-20h17.q1k vc_7 62 452 13525 13524 F 391 0.00 490 reject_low 8 ALIGNMENT 41 YS2-20h17.q1k vc_4 450 490 5831 5871 F 41 100.00 490 reject_low 6 ALIGNMENT 0 YS2-20h17.q1k vc_5 451 62 37 36 C 390 0.00 490 reject_low 9 ALIGNMENT 36 YS2-20h17.q1k vc_5 487 452 1 36 C 36 100.00 490 reject_low 9 ALIGNMENT 352 YS2-20h17.q1k chr11 450 37 506219 506624 C 414 96.38 490 accept_chi 0 ALIGNMENT 39 YS2-20h17.q1k vc_5 490 452 5025 5063 C 39 100.00 490 reject_low 7 ALIGNMENT 0 YS2-20h17.q1k vc_3 449 62 2513 2512 C 388 0.00 490 reject_low 5 ALIGNMENT 38 YS2-20h17.q1k vc_7 453 490 13525 13562 F 38 100.00 490 reject_low 8 ALIGNMENT 0 YS2-20h17.q1k vc_5 451 62 5064 5063 C 390 0.00 490 reject_low 7 ALIGNMENT 0 YS2-20h17.p1k vc_3 477 62 2104 2103 C 416 0.00 1476 reject_low 3 ALIGNMENT 36 YS2-20h18.q1k vc_5 374 339 1 36 C 36 100.00 377 reject_low 9 ALIGNMENT 283 YS2-20h18.q1k chr04 42 338 963500 963796 F 297 99.33 377 accept_chi 0 ALIGNMENT 0 YS2-20h18.q1k chr04 339 377 963796 963795 F 39 0.00 377 accept_chi 0 ALIGNMENT 39 YS2-20h18.q1k vc_5 377 339 5025 5063 C 39 100.00 377 reject_low 6 ALIGNMENT 42 YS2-20h18.q1k vc_1 377 336 2472 2513 C 42 100.00 377 reject_low 2 ALIGNMENT 280 YS2-20h18.p1k chr04 330 37 963500 963793 C 294 99.32 349 accept_chi 1 ALIGNMENT 38 YS2-20h18.q1k vc_7 340 377 63 100 F 38 100.00 377 reject_low 7 ALIGNMENT 42 YS2-20h18.q1k vc_3 377 336 2472 2513 C 42 100.00 377 reject_low 4 ALIGNMENT 0 YS2-20h18.q1k vc_1 335 62 2514 2513 C 274 0.00 377 reject_low 2 ALIGNMENT 0 YS2-20h18.q1k vc_3 335 62 2514 2513 C 274 0.00 377 reject_low 4 ALIGNMENT 0 YS2-20h18.q1k vc_2 335 62 2147 2146 C 274 0.00 377 reject_low 3 ALIGNMENT 0 YS2-20h18.q1k vc_7 62 339 13525 13524 F 278 0.00 377 reject_low 8 ALIGNMENT 0 YS2-20h18.q1k vc_4 62 335 5830 5829 F 274 0.00 377 reject_low 5 ALIGNMENT 0 YS2-20h18.q1k vc_7 62 339 63 62 F 278 0.00 377 reject_low 7 ALIGNMENT 42 YS2-20h18.q1k vc_2 377 336 2105 2146 C 42 100.00 377 reject_low 3 ALIGNMENT 0 YS2-20h18.p1k chr04 349 331 963501 963500 C 19 0.00 349 accept_chi 1 ALIGNMENT 0 YS2-20h18.q1k vc_5 338 62 37 36 C 277 0.00 377 reject_low 9 ALIGNMENT 38 YS2-20h18.q1k vc_7 340 377 13525 13562 F 38 100.00 377 reject_low 8 ALIGNMENT 42 YS2-20h18.q1k vc_4 336 377 5830 5871 F 42 100.00 377 reject_low 5 ALIGNMENT 0 YS2-20h18.q1k vc_5 338 62 5064 5063 C 277 0.00 377 reject_low 6 ALIGNMENT 1044 YS2-20h20.p1k chr09 38 1322 258806 260090 F 1285 95.10 1331 accept 0 ALIGNMENT 642 YS2-20h20.q1k chr09 761 30 261519 262245 C 732 97.40 1235 accept 0 ALIGNMENT 725 YS2-20h21.q1k chr13 41 899 570163 571036 F 859 95.69 1147 accept 0 ALIGNMENT 1023 YS2-20h21.p1k chr13 1229 36 574299 575488 C 1194 96.06 1356 accept 0 ALIGNMENT 961 YS2-20h22.q1k chr16 1095 37 283738 284800 C 1059 97.73 1165 accept 0 ALIGNMENT 0 YS2-20h22.p1k chr15 174 62 779409 779408 C 113 0.00 1348 reject_low 1 ALIGNMENT 1008 YS2-20h22.p1k chr16 36 1303 281979 283250 F 1268 93.69 1348 accept 0 ALIGNMENT 0 YS2-20h22.p1k chr15 707 205 778873 779378 C 503 0.00 1348 reject_low 1 ALIGNMENT 180 YS2-20h22.p1k chr15 980 708 778601 778872 C 273 88.64 1348 reject_low 1 ALIGNMENT 26 YS2-20h22.p1k chr15 204 175 779379 779408 C 30 96.67 1348 reject_low 1 ALIGNMENT 296 YS2-20h23.p1k chr13 906 219 574660 575339 C 688 82.12 1451 accept 0 ALIGNMENT 0 YS2-20i01.p1k chr12 564 288 458830 458829 C 277 0.00 1438 reject_low 1 ALIGNMENT 0 YS2-20i01.p1k chr12 564 288 467967 467966 C 277 0.00 1438 reject_low 2 ALIGNMENT 850 YS2-20i01.q1k chr04 40 1015 680915 681880 F 976 97.34 1131 accept 0 ALIGNMENT 0 YS2-20i01.p1k chr04 280 92 682292 682291 C 189 0.00 1438 accept 0 ALIGNMENT 339 YS2-20i01.p1k chr04 692 281 681884 682291 C 412 95.39 1438 accept 0 ALIGNMENT 223 YS2-20i01.p1k chr12 287 29 458829 459088 C 259 96.91 1438 reject_low 1 ALIGNMENT 223 YS2-20i01.p1k chr12 287 29 467966 468225 C 259 96.91 1438 reject_low 2 ALIGNMENT 636 YS2-20i02.q1k chr04 38 877 680932 681768 F 840 93.45 1212 accept 0 ALIGNMENT 0 YS2-20i03.q1k vc_4 62 183 5829 5828 F 122 0.00 226 reject_low 11 ALIGNMENT 42 YS2-20i03.q1k vc_4 184 226 5829 5871 F 43 100.00 226 reject_low 11 ALIGNMENT 506 YS2-20i03.p1k vc_5 730 1 3957 4669 C 730 91.37 735 reject_vc 0 ALIGNMENT 503 YS2-20i03.p1k vc_3 730 1 1037 1749 C 730 91.23 735 reject_vc 3 ALIGNMENT 36 YS2-20i03.q1k vc_5 223 188 1 36 C 36 100.00 226 reject_low 14 ALIGNMENT 132 YS2-20i03.q1k chr06 186 40 202234 202380 C 147 97.28 226 accept 6 ALIGNMENT 497 YS2-20i03.p1k vc_7 1 730 13918 14630 F 730 90.96 735 reject_vc 5 ALIGNMENT 503 YS2-20i03.p1k vc_1 730 1 1037 1749 C 730 91.23 735 reject_vc 1 ALIGNMENT 0 YS2-20i03.q1k vc_7 62 188 13525 13524 F 127 0.00 226 reject_low 13 ALIGNMENT 39 YS2-20i03.q1k vc_5 226 188 5025 5063 C 39 100.00 226 reject_low 12 ALIGNMENT 0 YS2-20i03.q1k chr06 226 187 202235 202234 C 40 0.00 226 accept 6 ALIGNMENT 0 YS2-20i03.q1k vc_1 183 62 2515 2514 C 122 0.00 226 reject_low 8 ALIGNMENT 0 YS2-20i03.q1k vc_2 183 62 2148 2147 C 122 0.00 226 reject_low 9 ALIGNMENT 0 YS2-20i03.q1k vc_5 187 62 5064 5063 C 126 0.00 226 reject_low 12 ALIGNMENT 38 YS2-20i03.q1k vc_7 189 226 13525 13562 F 38 100.00 226 reject_low 13 ALIGNMENT 42 YS2-20i03.q1k vc_2 226 184 2105 2147 C 43 100.00 226 reject_low 9 ALIGNMENT 0 YS2-20i03.q1k vc_3 183 62 2515 2514 C 122 0.00 226 reject_low 10 ALIGNMENT 503 YS2-20i03.p1k vc_2 730 1 1037 1749 C 730 91.23 735 reject_vc 2 ALIGNMENT 0 YS2-20i03.q1k vc_5 187 62 37 36 C 126 0.00 226 reject_low 14 ALIGNMENT 42 YS2-20i03.q1k vc_1 226 184 2472 2514 C 43 100.00 226 reject_low 8 ALIGNMENT 497 YS2-20i03.p1k vc_7 1 730 456 1168 F 730 90.96 735 reject_vc 4 ALIGNMENT 499 YS2-20i03.p1k vc_6 1 614 3712 4318 F 614 94.63 735 reject_vc 7 ALIGNMENT 42 YS2-20i03.q1k vc_3 226 184 2472 2514 C 43 100.00 226 reject_low 10 ALIGNMENT 1059 YS2-20i04.p1k chr04 31 1279 218700 219964 F 1249 96.00 1284 accept 0 ALIGNMENT 977 YS2-20i04.q1k chr04 1182 37 222007 223162 C 1146 95.99 1201 accept 0 ALIGNMENT 974 YS2-20i05.q1k chr12 1175 29 465442 466589 C 1147 95.38 1180 accept 1 ALIGNMENT 974 YS2-20i05.q1k chr12 1175 29 456305 457452 C 1147 95.38 1180 accept 0 ALIGNMENT 1082 YS2-20i05.p1k chr12 31 1241 451613 452828 F 1211 97.19 1337 accept 0 ALIGNMENT 0 YS2-20i05.p1k chr12 62 205 489754 489753 F 144 0.00 1337 reject_low 2 ALIGNMENT 1082 YS2-20i05.p1k chr12 31 1241 460750 461965 F 1211 97.19 1337 accept 1 ALIGNMENT 756 YS2-20i05.p1k chr12 206 994 489754 490543 F 789 98.86 1337 reject_low 2 ALIGNMENT 1036 YS2-20i06.p1k chr16 1234 29 145888 147106 C 1206 96.93 1355 accept 0 ALIGNMENT 1013 YS2-20i06.q1k chr16 38 1190 142441 143599 F 1153 97.14 1232 accept 0 ALIGNMENT 936 YS2-20i07.p1k chr13 30 1068 158836 159875 F 1039 97.40 1333 accept 0 ALIGNMENT 959 YS2-20i07.q1k chr13 1218 29 163957 165134 C 1190 94.37 1231 accept 0 ALIGNMENT 1070 YS2-20i10.p1k chr04 1234 33 1047703 1048923 C 1202 97.34 1352 accept 0 ALIGNMENT 911 YS2-20i10.q1k chr04 30 1173 1044446 1045605 F 1144 94.67 1243 accept 0 ALIGNMENT 523 YS2-20i11.p1k vc_7 1 810 456 1267 F 810 89.63 854 reject_vc 4 ALIGNMENT 532 YS2-20i11.p1k vc_5 810 1 3858 4669 C 810 89.63 854 reject_vc 0 ALIGNMENT 529 YS2-20i11.p1k vc_2 810 1 938 1749 C 810 89.51 854 reject_vc 2 ALIGNMENT 529 YS2-20i11.p1k vc_1 810 1 938 1749 C 810 89.51 854 reject_vc 1 ALIGNMENT 523 YS2-20i11.p1k vc_6 1 664 3712 4383 F 664 93.52 854 reject_low 6 ALIGNMENT 529 YS2-20i11.p1k vc_3 810 1 938 1749 C 810 89.51 854 reject_vc 3 ALIGNMENT 515 YS2-20i11.p1k vc_7 1 735 13918 14657 F 735 90.88 854 reject_vc 5 ALIGNMENT 624 YS2-20i13.p1k chr14 979 87 737932 738817 C 893 91.83 1401 accept 0 ALIGNMENT 331 YS2-20i14.q1k chr03 29 379 15370 15720 F 351 99.43 420 accept 0 ALIGNMENT 128 YS2-20i14.p1k vc_6 1 239 3712 3946 F 239 85.77 773 reject_vc 4 ALIGNMENT 128 YS2-20i14.p1k vc_1 239 1 1515 1749 C 239 85.77 773 reject_vc 1 ALIGNMENT 0 YS2-20i14.q1k vc_1 379 62 2513 2512 C 318 0.00 420 reject_low 7 ALIGNMENT 128 YS2-20i14.p1k vc_7 1 239 13918 14152 F 239 85.77 773 reject_vc 6 ALIGNMENT 0 YS2-20i14.q1k vc_4 62 379 5831 5830 F 318 0.00 420 reject_low 9 ALIGNMENT 128 YS2-20i14.p1k vc_3 239 1 1515 1749 C 239 85.77 773 reject_vc 2 ALIGNMENT 0 YS2-20i14.q1k vc_5 381 62 37 36 C 320 0.00 420 reject_low 12 ALIGNMENT 0 YS2-20i14.q1k vc_7 62 382 13525 13524 F 321 0.00 420 reject_low 11 ALIGNMENT 41 YS2-20i14.q1k vc_3 420 380 2472 2512 C 41 100.00 420 reject_low 8 ALIGNMENT 128 YS2-20i14.p1k vc_5 239 1 4435 4669 C 239 85.77 773 reject_vc 3 ALIGNMENT 38 YS2-20i14.q1k vc_7 383 420 13525 13562 F 38 100.00 420 reject_low 11 ALIGNMENT 36 YS2-20i14.q1k vc_5 417 382 1 36 C 36 100.00 420 reject_low 12 ALIGNMENT 39 YS2-20i14.q1k vc_5 420 382 5025 5063 C 39 100.00 420 reject_low 10 ALIGNMENT 128 YS2-20i14.p1k vc_7 1 239 456 690 F 239 85.77 773 reject_vc 5 ALIGNMENT 41 YS2-20i14.q1k vc_1 420 380 2472 2512 C 41 100.00 420 reject_low 7 ALIGNMENT 41 YS2-20i14.q1k vc_4 380 420 5831 5871 F 41 100.00 420 reject_low 9 ALIGNMENT 0 YS2-20i14.q1k vc_5 381 62 5064 5063 C 320 0.00 420 reject_low 10 ALIGNMENT 0 YS2-20i14.q1k chr03 380 420 15720 15719 F 41 0.00 420 accept 0 ALIGNMENT 0 YS2-20i14.q1k vc_3 379 62 2513 2512 C 318 0.00 420 reject_low 8 ALIGNMENT 871 YS2-20i15.p1k chr14 1115 39 737758 738850 C 1077 94.99 1271 accept 0 ALIGNMENT 1018 YS2-20i15.q1k chr14 37 1181 733827 734967 F 1145 97.03 1199 accept 0 ALIGNMENT 21 YS2-20i17.p1k chrm 768 791 6131 6154 F 24 95.83 1338 reject_low 3 ALIGNMENT 0 YS2-20i17.q1k chrm 745 868 34286 34285 F 124 0.00 1168 reject_low 12 ALIGNMENT 44 YS2-20i17.q1k chrm 466 410 9476 9532 C 57 92.98 1168 reject_low 16 ALIGNMENT 0 YS2-20i17.p1k chrm 761 719 77939 77930 C 43 0.00 1338 reject_bad_break 0 ALIGNMENT 312 YS2-20i17.p1k chrm 718 164 77931 78497 C 555 97.48 1338 reject_bad_break 0 ALIGNMENT 0 YS2-20i17.p1k chrm 62 128 72791 72790 F 67 0.00 1338 reject_low 5 ALIGNMENT 0 YS2-20i17.q1k chrm 455 640 52816 55487 F 186 0.00 1168 reject_low 18 ALIGNMENT 447 YS2-20i17.q1k chrm 41 1167 77294 78418 F 1127 89.35 1168 reject_bad_break 0 ALIGNMENT 34 YS2-20i17.q1k chrm 454 411 52330 52373 C 44 95.45 1168 reject_low 4,6 ALIGNMENT 0 YS2-20i17.p1k chrm 771 733 53705 53735 C 39 0.00 1338 reject_low 13 ALIGNMENT 160 YS2-20i17.q1k chrm 762 1091 77994 78329 F 330 95.15 1168 reject_low 1 ALIGNMENT 0 YS2-20i17.p1k chrm 207 708 50567 50715 F 502 0.00 1338 reject_low 4 ALIGNMENT 47 YS2-20i17.q1k chrm 648 744 34193 34286 F 97 85.57 1168 reject_low 12 ALIGNMENT 83 YS2-20i17.p1k chrm 862 762 77840 77938 C 101 95.05 1338 reject_bad_break 0 ALIGNMENT 57 YS2-20i17.p1k chrm 128 234 908 1017 F 107 86.92 1338 reject_low 3 ALIGNMENT 0 YS2-20i17.q1k chrm 99 553 34138 34137 F 455 0.00 1168 reject_low 12 ALIGNMENT 0 YS2-20i17.q1k chrm 706 868 48007 48006 F 163 0.00 1168 reject_low 11 ALIGNMENT 0 YS2-20i17.p1k chrm 62 652 68548 68547 F 591 0.00 1338 reject_low 2 ALIGNMENT 38 YS2-20i17.q1k chrm 402 452 48093 48143 F 51 92.16 1168 reject_low 13 ALIGNMENT 0 YS2-20i17.q1k chrm 473 868 10455 10454 F 396 0.00 1168 reject_low 9 ALIGNMENT 0 YS2-20i17.q1k chrm 409 99 12312 12311 C 311 0.00 1168 reject_low 3 ALIGNMENT 23 YS2-20i17.p1k chrm 719 743 84193 84217 F 25 100.00 1338 reject_low 15 ALIGNMENT 0 YS2-20i17.q1k chrm 99 410 10394 10393 F 312 0.00 1168 reject_low 9 ALIGNMENT 0 YS2-20i17.p1k chrm 235 767 1018 6130 F 533 0.00 1338 reject_low 3 ALIGNMENT 0 YS2-20i17.p1k chrm 710 62 53758 53757 C 649 0.00 1338 reject_low 13 ALIGNMENT 0 YS2-20i17.q1k chrm 99 761 77994 77993 F 663 0.00 1168 reject_low 1 ALIGNMENT 20 YS2-20i17.p1k chrm 744 768 84213 84236 F 25 96.00 1338 reject_low 15 ALIGNMENT 20 YS2-20i17.p1k chrm 732 711 53736 53757 C 22 100.00 1338 reject_low 13 ALIGNMENT 36 YS2-20i17.q1k chrm 411 472 10394 10455 F 62 88.71 1168 reject_low 9 ALIGNMENT 31 YS2-20i17.q1k chrm 411 454 52772 52815 F 44 93.18 1168 reject_low 18 ALIGNMENT 21 YS2-20i17.p1k chrm 129 176 50769 50821 F 48 83.33 1338 reject_low 6 ALIGNMENT 48 YS2-20i17.q1k chrm 410 474 34286 34351 F 65 92.31 1168 reject_low 7 ALIGNMENT 0 YS2-20i17.p1k chrm 182 766 72841 72840 F 585 0.00 1338 reject_low 5 ALIGNMENT 40 YS2-20i17.q1k chrm 764 648 68548 68666 C 117 82.91 1168 reject_low 14 ALIGNMENT 0 YS2-20i17.q1k chrm 868 647 70478 70477 C 222 0.00 1168 reject_low 2 ALIGNMENT 0 YS2-20i17.q1k chrm 410 99 52374 52373 C 312 0.00 1168 reject_low 4,6 ALIGNMENT 20 YS2-20i17.q1k chrm 680 705 47982 48007 F 26 100.00 1168 reject_low 11 ALIGNMENT 0 YS2-20i17.q1k chrm 463 868 66878 66877 F 406 0.00 1168 reject_low 8 ALIGNMENT 27 YS2-20i17.q1k chrm 641 796 55488 55635 F 156 81.41 1168 reject_low 17,18 ALIGNMENT 0 YS2-20i17.q1k chrm 626 467 6155 9475 C 160 0.00 1168 reject_low 16 ALIGNMENT 0 YS2-20i17.p1k chrm 177 766 50821 50820 F 590 0.00 1338 reject_low 6 ALIGNMENT 27 YS2-20i17.q1k chrm 554 624 34138 34210 F 71 81.69 1168 reject_low 12 ALIGNMENT 39 YS2-20i17.p1k chrm 653 768 68548 68665 F 116 82.76 1338 reject_low 2 ALIGNMENT 0 YS2-20i17.q1k chrm 475 868 34351 34350 F 394 0.00 1168 reject_low 7 ALIGNMENT 28 YS2-20i17.q1k chrm 646 601 70477 70521 C 46 89.13 1168 reject_low 2,14 ALIGNMENT 0 YS2-20i17.q1k chrm 868 655 6128 6127 C 214 0.00 1168 reject_low 16 ALIGNMENT 0 YS2-20i17.p1k chrm 62 127 908 907 F 66 0.00 1338 reject_low 3 ALIGNMENT 37 YS2-20i17.q1k chrm 444 403 67955 67997 C 42 97.62 1168 reject_low 10 ALIGNMENT 0 YS2-20i17.q1k chrm 453 640 46357 55487 F 188 0.00 1168 reject_low 17 ALIGNMENT 43 YS2-20i17.p1k chrm 116 206 50475 50566 F 91 85.71 1338 reject_low 4 ALIGNMENT 0 YS2-20i17.q1k chrm 99 410 52772 52771 F 312 0.00 1168 reject_low 18 ALIGNMENT 0 YS2-20i17.p1k chrm 163 133 78498 78493 C 31 0.00 1338 reject_bad_break 0 ALIGNMENT 0 YS2-20i17.q1k chrm 868 478 12245 12244 C 391 0.00 1168 reject_low 3 ALIGNMENT 38 YS2-20i17.p1k chrm 129 181 72791 72841 F 53 94.34 1338 reject_low 5 ALIGNMENT 0 YS2-20i17.q1k chrm 868 455 52331 52330 C 414 0.00 1168 reject_low 4,6 ALIGNMENT 0 YS2-20i17.q1k chrm 868 445 67956 67955 C 424 0.00 1168 reject_low 10 ALIGNMENT 0 YS2-20i17.q1k chrm 402 99 67998 67997 C 304 0.00 1168 reject_low 10 ALIGNMENT 0 YS2-20i17.q1k chrm 99 679 47982 47981 F 581 0.00 1168 reject_low 11 ALIGNMENT 0 YS2-20i17.q1k chrm 600 99 70522 70521 C 502 0.00 1168 reject_low 2,14 ALIGNMENT 23 YS2-20i17.p1k chrm 810 772 53666 53704 C 39 84.62 1338 reject_low 13 ALIGNMENT 58 YS2-20i17.p1k chrm 709 768 50716 50775 F 60 100.00 1338 reject_low 4 ALIGNMENT 24 YS2-20i17.q1k chrm 654 627 6127 6154 C 28 96.43 1168 reject_low 16 ALIGNMENT 33 YS2-20i17.q1k chrm 410 452 46314 46356 F 43 95.35 1168 reject_low 17 ALIGNMENT 0 YS2-20i17.q1k chrm 99 402 66819 66818 F 304 0.00 1168 reject_low 8 ALIGNMENT 0 YS2-20i17.q1k chrm 868 765 68549 68548 C 104 0.00 1168 reject_low 14 ALIGNMENT 0 YS2-20i17.q1k chrm 99 409 34286 34285 F 311 0.00 1168 reject_low 7 ALIGNMENT 0 YS2-20i17.q1k chrm 797 868 55635 55634 F 72 0.00 1168 reject_low 17,18 ALIGNMENT 39 YS2-20i17.q1k chrm 403 462 66819 66878 F 60 88.33 1168 reject_low 8 ALIGNMENT 0 YS2-20i17.p1k chrm 62 718 84193 84192 F 657 0.00 1338 reject_low 15 ALIGNMENT 78 YS2-20i17.p1k chrm 132 36 78494 78590 C 97 96.91 1338 reject_bad_break 0 ALIGNMENT 0 YS2-20i17.p1k chrm 62 115 50475 50474 F 54 0.00 1338 reject_low 4 ALIGNMENT 0 YS2-20i17.q1k chrm 99 401 48093 48092 F 303 0.00 1168 reject_low 13 ALIGNMENT 0 YS2-20i17.q1k chrm 625 647 34211 34192 F 23 0.00 1168 reject_low 12 ALIGNMENT 0 YS2-20i17.q1k chrm 453 868 48143 48142 F 416 0.00 1168 reject_low 13 ALIGNMENT 49 YS2-20i17.q1k chrm 477 410 12244 12311 C 68 91.18 1168 reject_low 3 ALIGNMENT 0 YS2-20i17.q1k chrm 409 99 9533 9532 C 311 0.00 1168 reject_low 16 ALIGNMENT 0 YS2-20i17.p1k chrm 744 743 84218 84212 F 0 0.00 1338 reject_low 15 ALIGNMENT 0 YS2-20i17.q1k chrm 99 409 46314 46313 F 311 0.00 1168 reject_low 17 ALIGNMENT 0 YS2-20i17.q1k chrm 647 647 68667 70476 C 1 0.00 1168 reject_low 14 ALIGNMENT 0 YS2-20i17.p1k chrm 62 128 50769 50768 F 67 0.00 1338 reject_low 6 ALIGNMENT 981 YS2-20i18.q1k chr15 1183 57 528101 529246 C 1127 96.54 1200 accept 0 ALIGNMENT 1048 YS2-20i18.p1k chr15 33 1347 525111 526442 F 1315 94.30 1367 accept 0 ALIGNMENT 192 YS2-20i19.q1k chr07 279 41 774467 774707 C 239 93.72 319 accept 0 ALIGNMENT 41 YS2-20i19.q1k vc_3 319 279 2472 2512 C 41 100.00 319 reject_low 2 ALIGNMENT 38 YS2-20i19.q1k vc_7 282 319 13525 13562 F 38 100.00 319 reject_low 5 ALIGNMENT 39 YS2-20i19.q1k vc_5 319 281 5025 5063 C 39 100.00 319 reject_low 4 ALIGNMENT 0 YS2-20i19.q1k vc_3 278 107 2513 2512 C 172 0.00 319 reject_low 2 ALIGNMENT 0 YS2-20i19.q1k vc_1 278 107 2513 2512 C 172 0.00 319 reject_low 1 ALIGNMENT 0 YS2-20i19.q1k chr07 319 280 774468 774467 C 40 0.00 319 accept 0 ALIGNMENT 41 YS2-20i19.q1k vc_1 319 279 2472 2512 C 41 100.00 319 reject_low 1 ALIGNMENT 0 YS2-20i19.q1k vc_5 280 107 5064 5063 C 174 0.00 319 reject_low 4 ALIGNMENT 0 YS2-20i19.q1k vc_4 107 278 5831 5830 F 172 0.00 319 reject_low 3 ALIGNMENT 0 YS2-20i19.q1k vc_5 280 107 37 36 C 174 0.00 319 reject_low 6 ALIGNMENT 41 YS2-20i19.q1k vc_4 279 319 5831 5871 F 41 100.00 319 reject_low 3 ALIGNMENT 36 YS2-20i19.q1k vc_5 316 281 1 36 C 36 100.00 319 reject_low 6 ALIGNMENT 0 YS2-20i19.q1k vc_7 107 281 13525 13524 F 175 0.00 319 reject_low 5 ALIGNMENT 0 YS2-20i21.q1k vc_4 94 189 5831 5830 F 96 0.00 230 reject_low 3 ALIGNMENT 0 YS2-20i21.q1k vc_7 94 192 13525 13524 F 99 0.00 230 reject_low 5 ALIGNMENT 41 YS2-20i21.q1k vc_1 230 190 2472 2512 C 41 100.00 230 reject_low 1 ALIGNMENT 0 YS2-20i21.q1k vc_3 189 94 2513 2512 C 96 0.00 230 reject_low 2 ALIGNMENT 41 YS2-20i21.q1k vc_3 230 190 2472 2512 C 41 100.00 230 reject_low 2 ALIGNMENT 0 YS2-20i21.q1k chr04 191 230 190982 190981 F 40 0.00 230 accept 0 ALIGNMENT 38 YS2-20i21.q1k vc_7 193 230 13525 13562 F 38 100.00 230 reject_low 5 ALIGNMENT 36 YS2-20i21.q1k vc_5 227 192 1 36 C 36 100.00 230 reject_low 6 ALIGNMENT 39 YS2-20i21.q1k vc_5 230 192 5025 5063 C 39 100.00 230 reject_low 4 ALIGNMENT 111 YS2-20i21.q1k chr04 37 190 190827 190982 F 154 91.56 230 accept 0 ALIGNMENT 0 YS2-20i21.q1k vc_5 191 94 37 36 C 98 0.00 230 reject_low 6 ALIGNMENT 41 YS2-20i21.q1k vc_4 190 230 5831 5871 F 41 100.00 230 reject_low 3 ALIGNMENT 0 YS2-20i21.q1k vc_1 189 94 2513 2512 C 96 0.00 230 reject_low 1 ALIGNMENT 0 YS2-20i21.q1k vc_5 191 94 5064 5063 C 98 0.00 230 reject_low 4 ALIGNMENT 801 YS2-20i22.p1k chr12 31 1095 4562 5642 F 1065 92.96 1266 reject_low 12 ALIGNMENT 22 YS2-20i22.p1k chr08 827 851 4972 4996 F 25 96.00 1266 reject_low 21 ALIGNMENT 815 YS2-20i22.p1k chr15 1095 31 1084634 1085715 C 1065 93.24 1266 reject_low 11 ALIGNMENT 860 YS2-20i22.p1k chr16 31 1095 5421 6507 F 1065 94.37 1266 reject_low 8 ALIGNMENT 815 YS2-20i22.p1k chr04 1095 31 1525469 1526550 C 1065 93.24 1266 reject_low 9 ALIGNMENT 313 YS2-20i22.q1k chr02 532 35 429552 430049 C 498 87.75 1137 reject_low 5 ALIGNMENT 860 YS2-20i22.p1k chr07 1095 31 1084370 1085456 C 1065 94.27 1266 reject_low 6 ALIGNMENT 739 YS2-20i22.p1k chr08 1095 31 557005 558068 C 1065 91.46 1266 accept 0 ALIGNMENT 860 YS2-20i22.p1k chr14 31 1095 5512 6598 F 1065 94.37 1266 reject_low 7 ALIGNMENT 801 YS2-20i22.p1k chr13 31 1095 4438 5518 F 1065 92.96 1266 reject_low 14 ALIGNMENT 815 YS2-20i22.p1k chr12 1095 31 1071670 1072751 C 1065 93.24 1266 reject_low 10 ALIGNMENT 545 YS2-20i22.p1k chr08 31 689 4294 4951 F 659 95.75 1266 reject_low 21 ALIGNMENT 717 YS2-20i22.p1k chr12 1108 31 1065156 1066199 C 1078 91.19 1266 reject_low 17 ALIGNMENT 281 YS2-20i22.q1k chr02 544 36 427690 428198 C 509 85.27 1137 reject_low 16 ALIGNMENT 787 YS2-20i22.p1k chr06 31 1095 3600 4665 F 1065 92.77 1266 reject_low 15 ALIGNMENT 0 YS2-20i22.q1k chr02 871 533 429553 429552 C 339 0.00 1137 reject_low 5 ALIGNMENT 839 YS2-20i22.p1k chr05 1108 31 570327 571396 C 1078 94.06 1266 reject_low 4 ALIGNMENT 751 YS2-20i22.p1k chr16 837 31 942804 943614 C 807 98.51 1266 reject_low 19 ALIGNMENT 801 YS2-20i22.p1k chr12 31 1095 10097 11177 F 1065 92.96 1266 reject_low 13 ALIGNMENT 995 YS2-20i22.q1k chr08 32 1133 552992 554087 F 1102 97.91 1137 accept 0 ALIGNMENT 0 YS2-20i22.p1k chr08 852 895 4996 4995 F 44 0.00 1266 reject_low 21 ALIGNMENT 0 YS2-20i22.p1k chr08 690 826 4952 4971 F 137 0.00 1266 reject_low 21 ALIGNMENT 688 YS2-20i22.q1k chr01 32 1109 226344 227419 F 1078 89.42 1137 reject_low 1 ALIGNMENT 932 YS2-20i22.p1k chr09 31 1062 5901 6941 F 1032 97.19 1266 reject_low 2 ALIGNMENT 932 YS2-20i22.p1k chr10 31 1062 5884 6924 F 1032 97.19 1266 reject_low 3 ALIGNMENT 744 YS2-20i22.p1k chr02 31 1095 4763 5827 F 1065 91.64 1266 reject_low 18 ALIGNMENT 0 YS2-20i22.q1k chr02 871 545 427691 427690 C 327 0.00 1137 reject_low 16 ALIGNMENT 637 YS2-20i22.p1k chr05 31 948 5467 6338 F 918 92.37 1266 reject_low 20 ALIGNMENT 0 YS2-20i22.p1k chr16 895 838 942805 942804 C 58 0.00 1266 reject_low 19 ALIGNMENT 0 YS2-20i23.p1k chr16 371 389 790485 790484 F 19 0.00 389 accept 0 ALIGNMENT 339 YS2-20i23.p1k chr16 31 370 790146 790485 F 340 100.00 389 accept 0 ALIGNMENT 0 YS2-20i24.p1k chr02 375 357 279063 279062 C 19 0.00 375 accept 0 ALIGNMENT 317 YS2-20i24.p1k chr02 356 34 279062 279384 C 323 100.00 375 accept 0 ALIGNMENT 39 YS2-20j01.q1k vc_5 265 227 5025 5063 C 39 100.00 265 reject_low 13 ALIGNMENT 0 YS2-20j01.p1k vc_5 182 92 5024 5023 C 91 0.00 1318 reject_vc 4 ALIGNMENT 0 YS2-20j01.p1k vc_7 92 182 13564 13563 F 91 0.00 1318 reject_vc 6 ALIGNMENT 41 YS2-20j01.q1k vc_1 265 225 2472 2512 C 41 100.00 265 reject_low 9 ALIGNMENT 317 YS2-20j01.p1k vc_7 183 964 13564 14334 F 782 81.97 1318 reject_vc 6 ALIGNMENT 0 YS2-20j01.p1k vc_1 182 92 2104 2103 C 91 0.00 1318 reject_vc 1 ALIGNMENT 0 YS2-20j01.p1k vc_2 182 92 2104 2103 C 91 0.00 1318 reject_vc 2 ALIGNMENT 0 YS2-20j01.q1k vc_3 224 62 2513 2512 C 163 0.00 265 reject_low 11 ALIGNMENT 41 YS2-20j01.q1k vc_4 225 265 5831 5871 F 41 100.00 265 reject_low 12 ALIGNMENT 170 YS2-20j01.q1k chr05 224 38 167434 167621 C 187 98.40 265 accept_chi 0 ALIGNMENT 41 YS2-20j01.q1k vc_3 265 225 2472 2512 C 41 100.00 265 reject_low 11 ALIGNMENT 0 YS2-20j01.q1k vc_4 62 224 5831 5830 F 163 0.00 265 reject_low 12 ALIGNMENT 133 YS2-20j01.p1k chr05 5 163 167463 167621 F 159 94.97 1318 accept_chi 7 ALIGNMENT 320 YS2-20j01.p1k vc_5 964 183 4253 5023 C 782 82.10 1318 reject_vc 4 ALIGNMENT 320 YS2-20j01.p1k vc_1 964 183 1333 2103 C 782 82.10 1318 reject_vc 1 ALIGNMENT 0 YS2-20j01.p1k vc_4 92 182 5873 5872 F 91 0.00 1318 reject_vc 8 ALIGNMENT 0 YS2-20j01.p1k vc_3 182 92 2471 2470 C 91 0.00 1318 reject_low 17 ALIGNMENT 320 YS2-20j01.p1k vc_2 964 183 1333 2103 C 782 82.10 1318 reject_vc 2 ALIGNMENT 0 YS2-20j01.p1k vc_7 92 182 102 101 F 91 0.00 1318 reject_vc 5 ALIGNMENT 24 YS2-20j01.p1k vc_1 211 183 2441 2470 C 29 96.55 1318 reject_low 16 ALIGNMENT 0 YS2-20j01.q1k vc_5 226 62 37 36 C 165 0.00 265 reject_low 15 ALIGNMENT 0 YS2-20j01.p1k vc_3 182 92 2104 2103 C 91 0.00 1318 reject_vc 3 ALIGNMENT 0 YS2-20j01.q1k chr05 265 225 167435 167434 C 41 0.00 265 accept_chi 0 ALIGNMENT 0 YS2-20j01.q1k vc_1 224 62 2513 2512 C 163 0.00 265 reject_low 9 ALIGNMENT 320 YS2-20j01.p1k vc_3 964 183 1333 2103 C 782 82.10 1318 reject_vc 3 ALIGNMENT 0 YS2-20j01.q1k vc_7 62 227 13525 13524 F 166 0.00 265 reject_low 14 ALIGNMENT 36 YS2-20j01.q1k vc_5 262 227 1 36 C 36 100.00 265 reject_low 15 ALIGNMENT 317 YS2-20j01.p1k vc_7 183 964 102 872 F 782 81.97 1318 reject_vc 5 ALIGNMENT 0 YS2-20j01.p1k vc_1 182 92 2471 2470 C 91 0.00 1318 reject_low 16 ALIGNMENT 38 YS2-20j01.q1k vc_7 228 265 13525 13562 F 38 100.00 265 reject_low 14 ALIGNMENT 206 YS2-20j01.p1k vc_4 183 504 5873 6192 F 322 88.82 1318 reject_vc 8 ALIGNMENT 0 YS2-20j01.q1k vc_5 226 62 5064 5063 C 165 0.00 265 reject_low 13 ALIGNMENT 24 YS2-20j01.p1k vc_3 211 183 2441 2470 C 29 96.55 1318 reject_low 17 ALIGNMENT 41 YS2-20j01.q1k vc_2 265 225 2105 2145 C 41 100.00 265 reject_low 10 ALIGNMENT 0 YS2-20j01.q1k vc_2 224 62 2146 2145 C 163 0.00 265 reject_low 10 ALIGNMENT 1005 YS2-20j02.p1k chr13 1194 37 833596 834767 C 1158 96.46 1349 accept 0 ALIGNMENT 994 YS2-20j02.q1k chr13 43 1145 829690 830788 F 1103 98.01 1145 accept 0 ALIGNMENT 1095 YS2-20j03.p1k chr10 33 1238 546484 547705 F 1206 97.43 1273 accept 0 ALIGNMENT 328 YS2-20j03.q1k chr10 457 28 550112 550528 C 430 94.88 1202 accept 0 ALIGNMENT 1046 YS2-20j04.p1k chr15 1220 29 273034 274240 C 1192 96.73 1268 accept 0 ALIGNMENT 914 YS2-20j04.q1k chr15 38 1131 269806 270913 F 1094 95.89 1176 accept 0 ALIGNMENT 122 YS2-20j05.p1k chr08 31 208 12578 12755 F 178 90.45 229 ambiguous_tel 8 ALIGNMENT 146 YS2-20j05.p1k chr09 212 29 433458 433641 C 184 93.48 229 ambiguous_tel 3 ALIGNMENT 0 YS2-20j05.p1k chr07 213 229 7119 7118 F 17 0.00 229 ambiguous_tel 5 ALIGNMENT 119 YS2-20j05.p1k chr14 212 29 781449 781633 C 184 89.13 229 ambiguous_tel 9 ALIGNMENT 0 YS2-20j05.p1k chr03 229 213 307327 307326 C 17 0.00 229 ambiguous_tel 1 ALIGNMENT 113 YS2-20j05.p1k chr12 29 212 13730 13916 F 184 88.04 229 ambiguous_tel 10 ALIGNMENT 130 YS2-20j05.p1k chr10 29 212 9422 9606 F 184 90.76 229 ambiguous_tel 7 ALIGNMENT 0 YS2-20j05.p1k chr12 229 213 1062453 1062452 C 17 0.00 229 ambiguous_tel 11 ALIGNMENT 112 YS2-20j05.p1k chr12 212 29 1062452 1062632 C 184 88.59 229 ambiguous_tel 11 ALIGNMENT 0 YS2-20j05.p1k chr01 213 229 2634 2633 F 17 0.00 229 ambiguous_tel 2 ALIGNMENT 0 YS2-20j05.p1k chr12 213 229 13916 13915 F 17 0.00 229 ambiguous_tel 10 ALIGNMENT 140 YS2-20j05.p1k chr11 29 212 2466 2649 F 184 92.39 229 ambiguous_tel 4 ALIGNMENT 149 YS2-20j05.p1k chr03 212 29 307326 307512 C 184 94.57 229 ambiguous_tel 1 ALIGNMENT 108 YS2-20j05.p1k chr02 29 187 8253 8414 F 159 89.94 229 ambiguous_tel 12 ALIGNMENT 0 YS2-20j05.p1k chr02 188 229 8414 8413 F 42 0.00 229 ambiguous_tel 12 ALIGNMENT 0 YS2-20j05.p1k chr16 190 229 8753 8752 F 40 0.00 229 ambiguous_tel 13 ALIGNMENT 0 YS2-20j05.p1k chr14 229 213 781450 781449 C 17 0.00 229 ambiguous_tel 9 ALIGNMENT 0 YS2-20j05.p1k chr09 229 213 433459 433458 C 17 0.00 229 ambiguous_tel 3 ALIGNMENT 0 YS2-20j05.p1k chr09 213 229 9623 9622 F 17 0.00 229 ambiguous_tel 6 ALIGNMENT 614 YS2-20j05.q1k chr13 17 899 481635 482509 F 883 92.07 1284 accept 0 ALIGNMENT 0 YS2-20j05.p1k chr10 213 229 9606 9605 F 17 0.00 229 ambiguous_tel 7 ALIGNMENT 61 YS2-20j05.p1k chr16 31 189 8593 8753 F 159 81.13 229 ambiguous_tel 13 ALIGNMENT 130 YS2-20j05.p1k chr09 29 212 9439 9623 F 184 90.76 229 ambiguous_tel 6 ALIGNMENT 0 YS2-20j05.p1k chr08 209 229 12755 12754 F 21 0.00 229 ambiguous_tel 8 ALIGNMENT 134 YS2-20j05.p1k chr07 29 212 6936 7119 F 184 91.30 229 ambiguous_tel 5 ALIGNMENT 147 YS2-20j05.p1k chr01 30 212 2451 2634 F 183 93.99 229 ambiguous_tel 2 ALIGNMENT 0 YS2-20j05.p1k chr11 213 229 2649 2648 F 17 0.00 229 ambiguous_tel 4 ALIGNMENT 338 YS2-20j07.q1k chr15 939 234 1023386 1024093 C 706 83.43 1323 accept 0 ALIGNMENT 975 YS2-20j07.p1k chr15 29 1289 1020000 1021277 F 1261 93.81 1324 accept 0 ALIGNMENT 32 YS2-20j08.q1k vc_2 425 385 2105 2145 C 41 92.68 1332 reject_low 10 ALIGNMENT 320 YS2-20j08.p1k vc_5 555 1 4245 4795 C 555 87.57 720 reject_vc 4 ALIGNMENT 316 YS2-20j08.p1k vc_6 1 489 3586 4073 F 489 89.16 720 reject_vc 7 ALIGNMENT 109 YS2-20j08.q1k vc_2 427 842 2166 2583 F 416 75.72 1332 reject_low 8 ALIGNMENT 32 YS2-20j08.q1k vc_4 385 425 5831 5871 F 41 92.68 1332 reject_low 12 ALIGNMENT 317 YS2-20j08.p1k vc_7 1 555 13792 14342 F 555 87.03 720 reject_vc 6 ALIGNMENT 21 YS2-20j08.q1k vc_4 427 553 6355 6481 F 127 72.44 1332 reject_low 12 ALIGNMENT 320 YS2-20j08.p1k vc_2 555 1 1325 1875 C 555 87.57 720 reject_vc 2 ALIGNMENT 102 YS2-20j08.p1k vc_4 1 126 6101 6226 F 126 93.65 720 reject_vc 11 ALIGNMENT 320 YS2-20j08.p1k vc_3 555 1 1325 1875 C 555 87.57 720 reject_vc 3 ALIGNMENT 317 YS2-20j08.p1k vc_7 1 555 330 880 F 555 87.03 720 reject_vc 5 ALIGNMENT 320 YS2-20j08.p1k vc_1 555 1 1325 1875 C 555 87.57 720 reject_vc 1 ALIGNMENT 0 YS2-20j08.q1k vc_2 384 62 2146 2145 C 323 0.00 1332 reject_low 10 ALIGNMENT 0 YS2-20j08.q1k vc_4 426 426 5872 6354 F 1 0.00 1332 reject_low 12 ALIGNMENT 0 YS2-20j08.q1k vc_4 62 384 5831 5830 F 323 0.00 1332 reject_low 12 ALIGNMENT 0 YS2-20j08.q1k vc_2 62 426 2166 2165 F 365 0.00 1332 reject_low 8 ALIGNMENT 0 YS2-20j08.q1k vc_4 426 62 5811 5810 C 365 0.00 1332 reject_low 9 ALIGNMENT 305 YS2-20j08.q1k chr04 28 383 1369781 1370138 F 356 96.07 1332 accept 0 ALIGNMENT 0 YS2-20j08.q1k vc_4 62 426 128 127 F 365 0.00 1332 reject_low 13 ALIGNMENT 21 YS2-20j08.q1k vc_4 427 553 128 254 F 127 72.44 1332 reject_low 13 ALIGNMENT 104 YS2-20j08.q1k vc_4 842 427 5391 5810 C 416 75.48 1332 reject_low 9 ALIGNMENT 877 YS2-20j09.p1k chr04 1091 30 1203102 1204156 C 1062 95.39 1355 accept 0 ALIGNMENT 0 YS2-20j11.q1k vc_1 62 327 2532 2531 F 266 0.00 1250 reject_low 2 ALIGNMENT 0 YS2-20j11.q1k vc_4 62 327 127 126 F 266 0.00 1250 reject_low 9 ALIGNMENT 0 YS2-20j11.q1k vc_2 287 62 2145 2144 C 226 0.00 1250 reject_low 12 ALIGNMENT 231 YS2-20j11.q1k vc_2 328 750 2165 2586 F 423 85.58 1250 reject_low 3 ALIGNMENT 231 YS2-20j11.q1k vc_5 328 750 2399 2820 F 423 85.58 1250 reject_low 5 ALIGNMENT 231 YS2-20j11.q1k vc_3 328 750 2532 2953 F 423 85.58 1250 reject_low 4 ALIGNMENT 0 YS2-20j11.q1k vc_5 288 62 5064 5063 C 227 0.00 1250 reject_low 14 ALIGNMENT 231 YS2-20j11.q1k vc_1 328 750 2532 2953 F 423 85.58 1250 reject_low 2 ALIGNMENT 0 YS2-20j11.q1k vc_7 538 62 5172 5171 C 477 0.00 1250 reject_low 8 ALIGNMENT 0 YS2-20j11.q1k vc_1 287 62 2512 2511 C 226 0.00 1250 reject_low 11 ALIGNMENT 33 YS2-20j11.q1k vc_1 326 288 2473 2511 C 39 94.87 1250 reject_low 11 ALIGNMENT 0 YS2-20j11.q1k vc_3 287 62 2512 2511 C 226 0.00 1250 reject_low 13 ALIGNMENT 102 YS2-20j11.q1k vc_4 328 486 6354 6511 F 159 89.31 1250 reject_low 10 ALIGNMENT 0 YS2-20j11.q1k vc_4 327 327 5871 6353 F 1 0.00 1250 reject_low 10 ALIGNMENT 0 YS2-20j11.q1k vc_7 327 62 2727 2726 C 266 0.00 1250 reject_low 6 ALIGNMENT 226 YS2-20j11.q1k vc_4 750 328 5388 5811 C 423 85.34 1250 reject_low 7 ALIGNMENT 243 YS2-20j11.q1k chr05 40 288 306039 306287 F 249 99.20 1250 accept_chi 1 ALIGNMENT 0 YS2-20j11.q1k vc_2 62 327 2165 2164 F 266 0.00 1250 reject_low 3 ALIGNMENT 102 YS2-20j11.q1k vc_4 328 486 127 284 F 159 89.31 1250 reject_low 9 ALIGNMENT 244 YS2-20j11.p1k chr05 276 29 306039 306287 C 248 99.60 295 accept_chi 0 ALIGNMENT 33 YS2-20j11.q1k vc_3 326 288 2473 2511 C 39 94.87 1250 reject_low 13 ALIGNMENT 0 YS2-20j11.p1k chr05 295 277 306040 306039 C 19 0.00 295 accept_chi 0 ALIGNMENT 33 YS2-20j11.q1k vc_4 288 326 5832 5870 F 39 94.87 1250 reject_low 10 ALIGNMENT 0 YS2-20j11.q1k vc_5 62 327 2399 2398 F 266 0.00 1250 reject_low 5 ALIGNMENT 32 YS2-20j11.q1k vc_5 326 289 5026 5063 C 38 94.74 1250 reject_low 14 ALIGNMENT 0 YS2-20j11.q1k vc_4 62 287 5832 5831 F 226 0.00 1250 reject_low 10 ALIGNMENT 0 YS2-20j11.q1k vc_4 327 62 1534 1533 C 266 0.00 1250 reject_low 15 ALIGNMENT 0 YS2-20j11.q1k vc_3 62 327 2532 2531 F 266 0.00 1250 reject_low 4 ALIGNMENT 106 YS2-20j11.q1k vc_7 750 539 4960 5171 C 212 83.49 1250 reject_low 8 ALIGNMENT 58 YS2-20j11.q1k vc_4 409 328 1451 1533 C 82 91.46 1250 reject_low 15 ALIGNMENT 231 YS2-20j11.q1k vc_7 750 328 2305 2726 C 423 85.58 1250 reject_low 6 ALIGNMENT 33 YS2-20j11.q1k vc_2 326 288 2106 2144 C 39 94.87 1250 reject_low 12 ALIGNMENT 0 YS2-20j11.q1k vc_4 327 62 5812 5811 C 266 0.00 1250 reject_low 7 ALIGNMENT 1030 YS2-20j12.p1k chr10 1254 43 285820 287047 C 1212 96.12 1319 accept 0 ALIGNMENT 823 YS2-20j12.q1k chr10 30 1089 281851 282910 F 1060 93.77 1296 accept 0 ALIGNMENT 382 YS2-20j13.q1k chr06 30 812 220422 221198 F 783 83.91 1221 accept 0 ALIGNMENT 256 YS2-20j13.q1k chr09 812 208 317227 317828 C 605 81.49 1221 reject_low 1 ALIGNMENT 954 YS2-20j14.q1k chr02 1174 41 566460 567596 C 1134 96.03 1247 accept 0 ALIGNMENT 989 YS2-20j16.p1k chr13 33 1240 844090 845299 F 1208 94.95 1347 accept 0 ALIGNMENT 1028 YS2-20j16.q1k chr13 1231 41 844445 845645 C 1191 96.22 1252 accept 0 ALIGNMENT 1041 YS2-20j19.p1k chr06 42 1238 233645 234853 F 1197 96.57 1341 accept 0 ALIGNMENT 941 YS2-20j19.q1k chr06 1151 34 236882 238002 C 1118 95.35 1153 accept 0 ALIGNMENT 952 YS2-20j20.q1k chr05 1166 39 305264 306384 C 1128 96.45 1166 accept 0 ALIGNMENT 1041 YS2-20j20.p1k chr05 27 1208 301862 303060 F 1182 97.38 1306 accept 0 ALIGNMENT 41 YS2-20j21.q1k vc_1 360 320 2472 2512 C 41 100.00 360 reject_vc 0 ALIGNMENT 0 YS2-20j21.q1k vc_4 62 319 5831 5830 F 258 0.00 360 reject_vc 2 ALIGNMENT 0 YS2-20j21.q1k vc_5 321 62 37 36 C 260 0.00 360 reject_vc 5 ALIGNMENT 39 YS2-20j21.q1k vc_5 360 322 5025 5063 C 39 100.00 360 reject_vc 3 ALIGNMENT 38 YS2-20j21.q1k vc_7 323 360 13525 13562 F 38 100.00 360 reject_vc 4 ALIGNMENT 0 YS2-20j21.q1k vc_5 321 62 5064 5063 C 260 0.00 360 reject_vc 3 ALIGNMENT 36 YS2-20j21.q1k vc_5 357 322 1 36 C 36 100.00 360 reject_vc 5 ALIGNMENT 0 YS2-20j21.q1k vc_3 319 62 2513 2512 C 258 0.00 360 reject_vc 1 ALIGNMENT 41 YS2-20j21.q1k vc_3 360 320 2472 2512 C 41 100.00 360 reject_vc 1 ALIGNMENT 0 YS2-20j21.q1k vc_1 319 62 2513 2512 C 258 0.00 360 reject_vc 0 ALIGNMENT 0 YS2-20j21.q1k vc_7 62 322 13525 13524 F 261 0.00 360 reject_vc 4 ALIGNMENT 41 YS2-20j21.q1k vc_4 320 360 5831 5871 F 41 100.00 360 reject_vc 2 ALIGNMENT 926 YS2-20j22.p1k chr07 1120 42 918545 919637 C 1079 96.01 1283 accept 0 ALIGNMENT 961 YS2-20j22.q1k chr07 36 1119 913891 914979 F 1084 96.68 1126 accept 0 ALIGNMENT 801 YS2-20j23.p1k chr12 36 852 462928 463745 F 817 99.63 853 accept 1 ALIGNMENT 801 YS2-20j23.p1k chr12 36 852 453791 454608 F 817 99.63 853 accept 0 ALIGNMENT 663 YS2-20k01.p1k chr02 32 850 511166 511985 F 819 94.63 1332 accept 0 ALIGNMENT 885 YS2-20k01.q1k chr02 1019 43 511985 512956 C 977 97.85 1184 accept 0 ALIGNMENT 250 YS2-20k03.q1k chr07 301 28 1014601 1014872 C 274 98.54 342 accept 0 ALIGNMENT 38 YS2-20k03.q1k vc_7 305 342 13525 13562 F 38 100.00 342 reject_low 5 ALIGNMENT 36 YS2-20k03.q1k vc_5 339 304 1 36 C 36 100.00 342 reject_low 6 ALIGNMENT 41 YS2-20k03.q1k vc_3 342 302 2472 2512 C 41 100.00 342 reject_low 2 ALIGNMENT 0 YS2-20k03.q1k vc_5 303 92 37 36 C 212 0.00 342 reject_low 6 ALIGNMENT 0 YS2-20k03.q1k vc_1 301 92 2513 2512 C 210 0.00 342 reject_low 1 ALIGNMENT 0 YS2-20k03.q1k vc_7 92 304 13525 13524 F 213 0.00 342 reject_low 5 ALIGNMENT 0 YS2-20k03.q1k vc_3 301 92 2513 2512 C 210 0.00 342 reject_low 2 ALIGNMENT 0 YS2-20k03.q1k vc_4 92 301 5831 5830 F 210 0.00 342 reject_low 3 ALIGNMENT 41 YS2-20k03.q1k vc_4 302 342 5831 5871 F 41 100.00 342 reject_low 3 ALIGNMENT 41 YS2-20k03.q1k vc_1 342 302 2472 2512 C 41 100.00 342 reject_low 1 ALIGNMENT 0 YS2-20k03.q1k chr07 342 302 1014602 1014601 C 41 0.00 342 accept 0 ALIGNMENT 39 YS2-20k03.q1k vc_5 342 304 5025 5063 C 39 100.00 342 reject_low 4 ALIGNMENT 0 YS2-20k03.q1k vc_5 303 92 5064 5063 C 212 0.00 342 reject_low 4 ALIGNMENT 247 YS2-20k04.q1k vc_7 303 53 4922 5172 C 251 99.60 713|0,1 reject_low 14 ALIGNMENT 529 YS2-20k04.q1k vc_5 1 703 2556 3267 F 703 92.18 713 reject_vc 0 ALIGNMENT 163 YS2-20k04.p1k vc_4 319 676 5874 6231 F 358 82.12 1387 reject_low 7 ALIGNMENT 302 YS2-20k04.q1k vc_1 1 303 2689 2991 F 303 100.00 713 reject_low 10 ALIGNMENT 0 YS2-20k04.q1k vc_4 237 62 6340 6339 C 176 0.00 713 reject_low 7 ALIGNMENT 93 YS2-20k04.q1k vc_7 421 305 4583 4699 C 117 94.02 713 reject_low 14 ALIGNMENT 0 YS2-20k04.p1k vc_1 611 612 2177 1815 C 0 0.00 1387 reject_low 5 ALIGNMENT 0 YS2-20k04.q1k vc_4 237 62 113 112 C 176 0.00 713 reject_low 15 ALIGNMENT 65 YS2-20k04.q1k vc_4 304 238 46 112 C 67 100.00 713 reject_low 15 ALIGNMENT 215 YS2-20k04.p1k vc_1 904 319 1523 2102 C 586 79.86 1387|293,0 reject_low 5 ALIGNMENT 0 YS2-20k04.q1k vc_7 304 304 4700 4921 C 1 0.00 713 reject_low 14 ALIGNMENT 0 YS2-20k04.q1k vc_4 305 310 1615 1881 F 6 0.00 713 reject_low 9 ALIGNMENT 302 YS2-20k04.q1k vc_3 1 303 2689 2991 F 303 100.00 713 reject_low 12 ALIGNMENT 0 YS2-20k04.q1k vc_4 334 305 6274 6273 C 30 0.00 713 reject_low 7 ALIGNMENT 0 YS2-20k04.p1k vc_3 318 77 2103 2102 C 242 0.00 1387 reject_low 6 ALIGNMENT 20 YS2-20k04.p1k vc_1 343 319 2444 2469 C 25 96.00 1387|0,293 reject_low 5 ALIGNMENT 0 YS2-20k04.q1k vc_1 304 334 2991 2990 F 31 0.00 713 reject_low 10 ALIGNMENT 0 YS2-20k04.p1k vc_7 77 318 13565 13564 F 242 0.00 1387 reject_low 4 ALIGNMENT 51 YS2-20k04.q1k vc_7 54 3 6360 6411 C 52 100.00 713|1,0 reject_low 14 ALIGNMENT 125 YS2-20k04.p1k vc_6 545 904 3585 3938 F 360 79.72 1387 reject_low 13 ALIGNMENT 215 YS2-20k04.p1k vc_2 904 319 1523 2102 C 586 79.86 1387 reject_low 3 ALIGNMENT 0 YS2-20k04.p1k vc_1 318 77 2103 2102 C 242 0.00 1387 reject_low 5 ALIGNMENT 0 YS2-20k04.p1k vc_5 318 77 5023 5022 C 242 0.00 1387 reject_vc 0 ALIGNMENT 0 YS2-20k04.p1k vc_7 77 318 103 102 F 242 0.00 1387 reject_vc 1 ALIGNMENT 0 YS2-20k04.q1k vc_7 53 54 5172 6360 C 0 0.00 713 reject_low 14 ALIGNMENT 0 YS2-20k04.q1k vc_4 62 237 1548 1547 F 176 0.00 713 reject_low 9 ALIGNMENT 302 YS2-20k04.q1k vc_2 1 303 2322 2624 F 303 100.00 713 reject_low 11 ALIGNMENT 20 YS2-20k04.p1k vc_3 343 319 2444 2469 C 25 96.00 1387|0,293 reject_low 6 ALIGNMENT 0 YS2-20k04.p1k vc_2 318 77 2103 2102 C 242 0.00 1387 reject_low 3 ALIGNMENT 224 YS2-20k04.p1k chr07 27 292 1014601 1014866 F 266 95.49 1387 reject_low 2 ALIGNMENT 0 YS2-20k04.q1k vc_4 334 305 47 46 C 30 0.00 713 reject_low 15 ALIGNMENT 65 YS2-20k04.q1k vc_4 304 238 6273 6339 C 67 100.00 713 reject_low 7 ALIGNMENT 0 YS2-20k04.p1k vc_6 77 544 3585 3584 F 468 0.00 1387 reject_low 13 ALIGNMENT 0 YS2-20k04.q1k vc_2 304 334 2624 2623 F 31 0.00 713 reject_low 11 ALIGNMENT 215 YS2-20k04.p1k vc_7 319 904 103 682 F 586 79.86 1387 reject_vc 1 ALIGNMENT 220 YS2-20k04.q1k vc_4 311 703 1882 2283 F 393 86.26 713 reject_low 9 ALIGNMENT 0 YS2-20k04.q1k vc_3 304 334 2991 2990 F 31 0.00 713 reject_low 12 ALIGNMENT 0 YS2-20k04.p1k vc_3 611 612 2177 1815 C 0 0.00 1387 reject_low 6 ALIGNMENT 65 YS2-20k04.q1k vc_4 238 304 1548 1614 F 67 100.00 713 reject_low 9 ALIGNMENT 528 YS2-20k04.q1k vc_7 663 1 1898 2569 C 663 93.82 713 reject_vc 1 ALIGNMENT 391 YS2-20k04.q1k vc_4 421 1 5232 5654 C 421 97.86 713 reject_low 8 ALIGNMENT 215 YS2-20k04.p1k vc_3 904 319 1523 2102 C 586 79.86 1387|293,0 reject_low 6 ALIGNMENT 215 YS2-20k04.p1k vc_5 904 319 4443 5022 C 586 79.86 1387 reject_vc 0 ALIGNMENT 0 YS2-20k04.p1k vc_4 77 318 5874 5873 F 242 0.00 1387 reject_low 7 ALIGNMENT 215 YS2-20k04.p1k vc_7 319 904 13565 14144 F 586 79.86 1387 reject_low 4 ALIGNMENT 0 YS2-20k05.q1k chr12 164 799 490543 490542 F 636 0.00 1212 reject_low 2 ALIGNMENT 421 YS2-20k05.p1k chr12 572 28 455313 455854 C 545 93.39 1375 accept 0 ALIGNMENT 989 YS2-20k05.q1k chr12 30 1119 461578 462659 F 1090 97.71 1212 accept 1 ALIGNMENT 989 YS2-20k05.q1k chr12 30 1119 452441 453522 F 1090 97.71 1212 accept 0 ALIGNMENT 421 YS2-20k05.p1k chr12 572 28 464450 464991 C 545 93.39 1375 accept 1 ALIGNMENT 120 YS2-20k05.q1k chr12 30 163 490409 490543 F 134 97.01 1212 reject_low 2 ALIGNMENT 0 YS2-20k06.q1k vc_4 815 814 5872 6353 F 0 0.00 1225 reject_low 12 ALIGNMENT 0 YS2-20k06.q1k chrm 62 526 66387 66386 F 465 0.00 1225 reject_low 9 ALIGNMENT 354 YS2-20k06.q1k chrm 36 495 65935 66390 F 460 98.91 1225 reject_low 1 ALIGNMENT 144 YS2-20k06.q1k vc_4 814 973 126 287 F 160 97.50 1225 reject_low 10 ALIGNMENT 82 YS2-20k06.q1k vc_4 902 814 1446 1534 C 89 97.75 1225 reject_low 13 ALIGNMENT 0 YS2-20k06.q1k vc_2 62 813 2164 2163 F 752 0.00 1225 reject_low 4 ALIGNMENT 0 YS2-20k06.q1k chrm 491 62 53268 53267 C 430 0.00 1225 reject_low 22 ALIGNMENT 39 YS2-20k06.q1k vc_5 814 776 5025 5063 C 39 100.00 1225 reject_low 19 ALIGNMENT 40 YS2-20k06.q1k vc_1 814 775 2472 2511 C 40 100.00 1225 reject_low 16 ALIGNMENT 0 YS2-20k06.q1k vc_5 775 62 37 36 C 714 0.00 1225 reject_low 20 ALIGNMENT 0 YS2-20k06.q1k vc_4 62 774 5832 5831 F 713 0.00 1225 reject_low 12 ALIGNMENT 0 YS2-20k06.q1k vc_5 775 62 5064 5063 C 714 0.00 1225 reject_low 19 ALIGNMENT 40 YS2-20k06.q1k vc_2 814 775 2105 2144 C 40 100.00 1225 reject_low 17 ALIGNMENT 0 YS2-20k06.q1k chrm 62 491 72791 72790 F 430 0.00 1225 reject_low 14 ALIGNMENT 0 YS2-20k06.q1k chrm 537 821 84805 84804 F 285 0.00 1225 reject_low 21 ALIGNMENT 0 YS2-20k06.q1k vc_4 813 62 5813 5812 C 752 0.00 1225 reject_low 8 ALIGNMENT 113 YS2-20k06.q1k chrm 527 722 66387 66581 F 196 98.47 1225 reject_low 9 ALIGNMENT 0 YS2-20k06.q1k vc_5 62 813 2398 2397 F 752 0.00 1225 reject_low 6 ALIGNMENT 40 YS2-20k06.q1k vc_3 814 775 2472 2511 C 40 100.00 1225 reject_low 18 ALIGNMENT 36 YS2-20k06.q1k vc_5 811 776 1 36 C 36 100.00 1225 reject_low 20 ALIGNMENT 0 YS2-20k06.q1k chrm 62 491 84761 84760 F 430 0.00 1225 reject_low 21 ALIGNMENT 0 YS2-20k06.p1k chrm 773 311 84762 84761 C 463 0.00 773 reject_low 14 ALIGNMENT 0 YS2-20k06.q1k chrm 723 821 66581 66580 F 99 0.00 1225 reject_low 9 ALIGNMENT 0 YS2-20k06.q1k vc_7 813 62 2728 2727 C 752 0.00 1225 reject_low 7 ALIGNMENT 144 YS2-20k06.q1k vc_4 814 973 6353 6514 F 160 97.50 1225|1,0 reject_low 12 ALIGNMENT 295 YS2-20k06.q1k vc_7 1217 814 2318 2727 C 404 91.83 1225 reject_low 7 ALIGNMENT 32 YS2-20k06.q1k chrm 492 529 72791 72828 F 38 100.00 1225 reject_low 14 ALIGNMENT 0 YS2-20k06.p1k chrm 773 316 905 904 C 458 0.00 773 reject_low 15 ALIGNMENT 0 YS2-20k06.q1k vc_3 774 62 2512 2511 C 713 0.00 1225 reject_low 18 ALIGNMENT 0 YS2-20k06.p1k chrm 272 62 72829 72828 C 211 0.00 773 reject_low 9 ALIGNMENT 295 YS2-20k06.q1k vc_5 814 1217 2398 2807 F 404 91.83 1225 reject_low 6 ALIGNMENT 43 YS2-20k06.p1k chrm 315 240 904 979 C 76 86.84 773 reject_low 15 ALIGNMENT 0 YS2-20k06.q1k vc_2 774 62 2145 2144 C 713 0.00 1225 reject_low 17 ALIGNMENT 0 YS2-20k06.p1k chrm 306 276 66391 66386 C 31 0.00 773 reject_bad_break 0 ALIGNMENT 0 YS2-20k06.q1k vc_7 1021 62 5173 5172 C 960 0.00 1225 reject_low 11 ALIGNMENT 0 YS2-20k06.p1k chrm 773 276 66388 66387 C 498 0.00 773 reject_low 1,2 ALIGNMENT 0 YS2-20k06.q1k vc_1 774 62 2512 2511 C 713 0.00 1225 reject_low 16 ALIGNMENT 36 YS2-20k06.p1k chrm 310 266 84761 84805 C 45 95.56 773 reject_low 14 ALIGNMENT 0 YS2-20k06.q1k vc_4 62 813 126 125 F 752 0.00 1225 reject_low 10 ALIGNMENT 0 YS2-20k06.p1k chrm 773 311 72792 72791 C 463 0.00 773 reject_low 9 ALIGNMENT 0 YS2-20k06.q1k vc_1 62 813 2531 2530 F 752 0.00 1225 reject_low 3 ALIGNMENT 295 YS2-20k06.q1k vc_2 814 1217 2164 2573 F 404 91.83 1225 reject_low 4 ALIGNMENT 29 YS2-20k06.q1k chrm 535 492 53225 53267 C 44 93.18 1225 reject_low 22 ALIGNMENT 111 YS2-20k06.q1k vc_7 1217 1022 4973 5172 C 196 86.73 1225 reject_low 11 ALIGNMENT 0 YS2-20k06.p1k chrm 62 266 53225 53224 F 205 0.00 773 reject_low 23 ALIGNMENT 0 YS2-20k06.q1k chrm 821 536 53226 53225 C 286 0.00 1225 reject_low 22 ALIGNMENT 0 YS2-20k06.q1k chrm 496 821 66390 66389 F 326 0.00 1225 reject_low 1 ALIGNMENT 0 YS2-20k06.q1k vc_3 62 813 2531 2530 F 752 0.00 1225 reject_low 5 ALIGNMENT 0 YS2-20k06.p1k chrm 265 62 84806 84805 C 204 0.00 773 reject_low 14 ALIGNMENT 40 YS2-20k06.q1k vc_4 775 814 5832 5871 F 40 100.00 1225 reject_low 12 ALIGNMENT 0 YS2-20k06.q1k chrm 775 821 66640 66639 F 47 0.00 1225 reject_low 2 ALIGNMENT 0 YS2-20k06.q1k chrm 62 298 66198 66197 F 237 0.00 1225 reject_low 2 ALIGNMENT 0 YS2-20k06.q1k chrm 530 821 72828 72827 F 292 0.00 1225 reject_low 14 ALIGNMENT 295 YS2-20k06.q1k vc_1 814 1217 2531 2940 F 404 91.83 1225 reject_low 3 ALIGNMENT 134 YS2-20k06.p1k chrm 275 28 66387 66639 C 248 96.77 773 reject_bad_break 0 reject_low 1,2 ALIGNMENT 177 YS2-20k06.q1k chrm 299 774 66198 66640 F 476 90.34 1225 reject_low 2 ALIGNMENT 29 YS2-20k06.p1k chrm 267 310 53225 53267 F 44 93.18 773 reject_low 23 ALIGNMENT 0 YS2-20k06.p1k chrm 311 773 53267 53266 F 463 0.00 773 reject_low 23 ALIGNMENT 288 YS2-20k06.q1k vc_4 1217 814 5401 5812 C 404 91.34 1225 reject_low 8 ALIGNMENT 32 YS2-20k06.p1k chrm 310 273 72791 72828 C 38 100.00 773 reject_low 9 ALIGNMENT 354 YS2-20k06.p1k chrm 766 307 65935 66390 C 460 98.91 773 reject_bad_break 0 ALIGNMENT 0 YS2-20k06.q1k vc_4 813 62 1535 1534 C 752 0.00 1225 reject_low 13 ALIGNMENT 36 YS2-20k06.q1k chrm 492 536 84761 84805 F 45 95.56 1225 reject_low 21 ALIGNMENT 295 YS2-20k06.q1k vc_3 814 1217 2531 2940 F 404 91.83 1225 reject_low 5 ALIGNMENT 0 YS2-20k06.p1k chrm 239 62 980 979 C 178 0.00 773 reject_low 15 ALIGNMENT 906 YS2-20k07.p1k chr05 1106 29 93967 95037 C 1078 96.29 1369 accept 0 ALIGNMENT 1007 YS2-20k07.q1k chr05 41 1166 89867 90996 F 1126 97.69 1168 accept 0 ALIGNMENT 39 YS2-20k08.q1k vc_5 235 197 5025 5063 C 39 100.00 235 reject_low 4 ALIGNMENT 0 YS2-20k08.q1k vc_7 62 197 13525 13524 F 136 0.00 235 reject_low 5 ALIGNMENT 0 YS2-20k08.q1k vc_5 196 62 37 36 C 135 0.00 235 reject_low 6 ALIGNMENT 0 YS2-20k08.q1k vc_1 193 62 2514 2513 C 132 0.00 235 reject_low 1 ALIGNMENT 36 YS2-20k08.q1k vc_5 232 197 1 36 C 36 100.00 235 reject_low 6 ALIGNMENT 42 YS2-20k08.q1k vc_3 235 194 2472 2513 C 42 100.00 235 reject_low 2 ALIGNMENT 0 YS2-20k08.q1k vc_5 196 62 5064 5063 C 135 0.00 235 reject_low 4 ALIGNMENT 42 YS2-20k08.q1k vc_4 194 235 5830 5871 F 42 100.00 235 reject_low 3 ALIGNMENT 0 YS2-20k08.q1k chr09 235 196 64585 64584 C 40 0.00 235 accept 0 ALIGNMENT 0 YS2-20k08.q1k vc_3 193 62 2514 2513 C 132 0.00 235 reject_low 2 ALIGNMENT 153 YS2-20k08.q1k chr09 195 36 64584 64743 C 160 100.00 235 accept 0 ALIGNMENT 38 YS2-20k08.q1k vc_7 198 235 13525 13562 F 38 100.00 235 reject_low 5 ALIGNMENT 42 YS2-20k08.q1k vc_1 235 194 2472 2513 C 42 100.00 235 reject_low 1 ALIGNMENT 0 YS2-20k08.q1k vc_4 62 193 5830 5829 F 132 0.00 235 reject_low 3 ALIGNMENT 41 YS2-20k09.q1k vc_1 317 277 2472 2512 C 41 100.00 317 reject_vc 1 ALIGNMENT 38 YS2-20k09.q1k vc_7 280 317 13525 13562 F 38 100.00 317 reject_vc 5 ALIGNMENT 36 YS2-20k09.q1k vc_5 314 279 1 36 C 36 100.00 317 reject_vc 6 ALIGNMENT 0 YS2-20k09.q1k vc_1 276 92 2513 2512 C 185 0.00 317 reject_vc 1 ALIGNMENT 32 YS2-20k09.p1k vc_7 299 433 13564 13698 F 135 75.56 1396 reject_vc 0 ALIGNMENT 0 YS2-20k09.q1k vc_5 278 92 5064 5063 C 187 0.00 317 reject_vc 4 ALIGNMENT 0 YS2-20k09.q1k vc_3 276 92 2513 2512 C 185 0.00 317 reject_vc 2 ALIGNMENT 0 YS2-20k09.q1k vc_7 92 279 13525 13524 F 188 0.00 317 reject_vc 5 ALIGNMENT 41 YS2-20k09.q1k vc_4 277 317 5831 5871 F 41 100.00 317 reject_vc 3 ALIGNMENT 39 YS2-20k09.q1k vc_5 317 279 5025 5063 C 39 100.00 317 reject_vc 4 ALIGNMENT 0 YS2-20k09.q1k vc_5 278 92 37 36 C 187 0.00 317 reject_vc 6 ALIGNMENT 41 YS2-20k09.q1k vc_3 317 277 2472 2512 C 41 100.00 317 reject_vc 2 ALIGNMENT 0 YS2-20k09.q1k vc_4 92 276 5831 5830 F 185 0.00 317 reject_vc 3 ALIGNMENT 0 YS2-20k10.p1k chr03 523 62 149989 149988 C 462 0.00 1368 reject_low 3 ALIGNMENT 71 YS2-20k10.p1k chr15 595 523 710201 710273 C 73 100.00 1368 reject_low 5 ALIGNMENT 0 YS2-20k10.p1k chr15 898 596 710202 710201 C 303 0.00 1368 reject_low 5 ALIGNMENT 73 YS2-20k10.p1k chr05 597 523 100131 100205 C 75 100.00 1368 reject_low 4 ALIGNMENT 71 YS2-20k10.p1k chr03 599 524 149913 149988 C 76 98.68 1368 reject_low 3 ALIGNMENT 32 YS2-20k10.p1k chr03 697 808 149509 149620 F 112 77.68 1368 reject_low 2 ALIGNMENT 0 YS2-20k10.p1k chr15 522 62 710274 710273 C 461 0.00 1368 reject_low 5 ALIGNMENT 0 YS2-20k10.p1k chr16 596 898 338918 338917 F 303 0.00 1368 reject_low 1 ALIGNMENT 1045 YS2-20k10.q1k chr10 1227 41 520935 522134 C 1187 96.46 1239 accept 0 ALIGNMENT 0 YS2-20k10.p1k chr05 898 598 100132 100131 C 301 0.00 1368 reject_low 4 ALIGNMENT 0 YS2-20k10.p1k chr03 809 898 149620 149619 F 90 0.00 1368 reject_low 2 ALIGNMENT 985 YS2-20k10.p1k chr10 32 1181 517235 518393 F 1150 96.17 1368 accept 0 ALIGNMENT 0 YS2-20k10.p1k chr03 62 696 149509 149508 F 635 0.00 1368 reject_low 2 ALIGNMENT 76 YS2-20k10.p1k chr16 503 595 338827 338918 F 93 94.62 1368 reject_low 1 ALIGNMENT 0 YS2-20k10.p1k chr16 62 502 338827 338826 F 441 0.00 1368 reject_low 1 ALIGNMENT 0 YS2-20k10.p1k chr05 522 62 100206 100205 C 461 0.00 1368 reject_low 4 ALIGNMENT 0 YS2-20k10.p1k chr03 898 600 149914 149913 C 299 0.00 1368 reject_low 3 ALIGNMENT 992 YS2-20k11.q1k chr11 1192 39 184794 185950 C 1154 96.97 1192 accept 0 ALIGNMENT 885 YS2-20k11.p1k chr11 29 1073 184675 185729 F 1045 96.75 1281 accept 0 ALIGNMENT 1043 YS2-20k12.p1k chr14 38 1210 590446 591636 F 1173 97.53 1353 accept 0 ALIGNMENT 1045 YS2-20k12.q1k chr14 1218 39 593244 594423 C 1180 97.03 1243 accept 0 ALIGNMENT 0 YS2-20k13.p1k chr08 826 844 62835 62834 F 19 0.00 1408 reject_low 4 ALIGNMENT 0 YS2-20k13.p1k chr05 844 826 434527 434526 C 19 0.00 1408 reject_low 3 ALIGNMENT 82 YS2-20k13.p1k chr11 826 739 313034 313121 C 88 98.86 1408 reject_low 1 ALIGNMENT 0 YS2-20k13.p1k chr07 844 823 110622 110621 C 22 0.00 1408 reject_low 6 ALIGNMENT 0 YS2-20k13.p1k chr11 738 62 313122 313121 C 677 0.00 1408 reject_low 1 ALIGNMENT 461 YS2-20k13.p1k chr13 597 1217 362917 363556 F 621 93.24 1408|4,0 accept_trans 0 ALIGNMENT 75 YS2-20k13.p1k chr07 743 818 319784 319859 F 76 100.00 1408 reject_low 5 ALIGNMENT 0 YS2-20k13.p1k chr07 62 742 319784 319783 F 681 0.00 1408 reject_low 5 ALIGNMENT 888 YS2-20k13.q1k chr13 1133 69 363618 364685 C 1065 95.87 1225 accept_trans 0 ALIGNMENT 0 YS2-20k13.p1k chr05 62 736 207350 207349 F 675 0.00 1408 reject_low 2 ALIGNMENT 0 YS2-20k13.p1k chr05 742 62 434609 434608 C 681 0.00 1408 reject_low 3 ALIGNMENT 81 YS2-20k13.p1k chr05 825 743 434526 434608 C 83 100.00 1408 reject_low 3 ALIGNMENT 0 YS2-20k13.p1k chr07 741 62 110702 110701 C 680 0.00 1408 reject_low 6 ALIGNMENT 0 YS2-20k13.p1k chr07 819 844 319859 319858 F 26 0.00 1408 reject_low 5 ALIGNMENT 0 YS2-20k13.p1k chr11 844 827 313035 313034 C 18 0.00 1408 reject_low 1 ALIGNMENT 0 YS2-20k13.p1k chr13 601 600 357002 362920 F 0 0.00 1408 accept_trans 0 ALIGNMENT 553 YS2-20k13.p1k chr13 33 603 356434 357004 F 571 100.00 1408|0,3 accept_trans 0 ALIGNMENT 73 YS2-20k13.p1k chr07 822 742 110621 110701 C 81 97.53 1408 reject_low 6 ALIGNMENT 0 YS2-20k13.p1k chr08 62 741 62752 62751 F 680 0.00 1408 reject_low 4 ALIGNMENT 76 YS2-20k13.p1k chr05 737 825 207350 207439 F 89 96.63 1408 reject_low 2 ALIGNMENT 76 YS2-20k13.p1k chr08 742 825 62752 62835 F 84 97.62 1408 reject_low 4 ALIGNMENT 0 YS2-20k13.p1k chr05 826 844 207439 207438 F 19 0.00 1408 reject_low 2 ALIGNMENT 0 YS2-20k14.q1k vc_3 600 62 2513 2512 C 539 0.00 641 reject_low 4 ALIGNMENT 0 YS2-20k14.q1k vc_2 600 62 2146 2145 C 539 0.00 641 reject_low 3 ALIGNMENT 518 YS2-20k14.q1k chr15 600 39 846084 846645 C 562 98.58 641 accept_chi 0 ALIGNMENT 36 YS2-20k14.q1k vc_5 638 603 1 36 C 36 100.00 641 reject_low 8 ALIGNMENT 41 YS2-20k14.q1k vc_2 641 601 2105 2145 C 41 100.00 641 reject_low 3 ALIGNMENT 0 YS2-20k14.p1k chr15 593 610 846645 846644 F 18 0.00 610 accept_chi 1 ALIGNMENT 41 YS2-20k14.q1k vc_3 641 601 2472 2512 C 41 100.00 641 reject_low 4 ALIGNMENT 39 YS2-20k14.q1k vc_5 641 603 5025 5063 C 39 100.00 641 reject_low 6 ALIGNMENT 41 YS2-20k14.q1k vc_1 641 601 2472 2512 C 41 100.00 641 reject_low 2 ALIGNMENT 0 YS2-20k14.q1k vc_4 62 600 5831 5830 F 539 0.00 641 reject_low 5 ALIGNMENT 0 YS2-20k14.q1k chr15 641 601 846085 846084 C 41 0.00 641 accept_chi 0 ALIGNMENT 0 YS2-20k14.q1k vc_5 602 62 37 36 C 541 0.00 641 reject_low 8 ALIGNMENT 41 YS2-20k14.q1k vc_4 601 641 5831 5871 F 41 100.00 641 reject_low 5 ALIGNMENT 38 YS2-20k14.q1k vc_7 604 641 13525 13562 F 38 100.00 641 reject_low 7 ALIGNMENT 0 YS2-20k14.q1k vc_5 602 62 5064 5063 C 541 0.00 641 reject_low 6 ALIGNMENT 0 YS2-20k14.q1k vc_1 600 62 2513 2512 C 539 0.00 641 reject_low 2 ALIGNMENT 514 YS2-20k14.p1k chr15 30 592 846084 846645 F 563 98.40 610 accept_chi 1 ALIGNMENT 0 YS2-20k14.q1k vc_7 62 603 13525 13524 F 542 0.00 641 reject_low 7 ALIGNMENT 922 YS2-20k15.q1k chr11 1158 30 7501 8630 C 1129 95.75 1160 accept 0 ALIGNMENT 798 YS2-20k15.p1k chr11 36 1157 7114 8238 F 1122 92.16 1313 accept 0 ALIGNMENT 1015 YS2-20k16.q1k chr04 38 1188 110478 111638 F 1151 97.05 1205 accept 0 ALIGNMENT 931 YS2-20k16.p1k chr04 1129 40 115649 116757 C 1090 96.33 1299 accept 0 ALIGNMENT 311 YS2-20k16.p1k chr04 479 40 216525 216964 C 440 90.91 1299 reject_low 1 ALIGNMENT 0 YS2-20k16.p1k chr04 900 480 216526 216525 C 421 0.00 1299 reject_low 1 ALIGNMENT 40 YS2-20k17.q1k vc_3 213 174 2472 2511 C 40 100.00 213 reject_low 4 ALIGNMENT 0 YS2-20k17.q1k vc_5 174 62 37 36 C 113 0.00 213 reject_low 8 ALIGNMENT 40 YS2-20k17.q1k vc_2 213 174 2105 2144 C 40 100.00 213 reject_low 3 ALIGNMENT 0 YS2-20k17.q1k vc_5 174 62 5064 5063 C 113 0.00 213 reject_low 6 ALIGNMENT 0 YS2-20k17.q1k vc_7 62 175 13525 13524 F 114 0.00 213 reject_low 7 ALIGNMENT 0 YS2-20k17.q1k vc_4 62 173 5832 5831 F 112 0.00 213 reject_low 5 ALIGNMENT 0 YS2-20k17.q1k vc_2 173 62 2145 2144 C 112 0.00 213 reject_low 3 ALIGNMENT 488 YS2-20k17.p1k chr02 84 843 301644 302401 F 760 89.08 1334 accept_chi 0 ALIGNMENT 0 YS2-20k17.q1k chr07 174 213 454736 454735 F 40 0.00 213 accept_chi 1 ALIGNMENT 36 YS2-20k17.q1k vc_5 210 175 1 36 C 36 100.00 213 reject_low 8 ALIGNMENT 0 YS2-20k17.q1k vc_1 173 62 2512 2511 C 112 0.00 213 reject_low 2 ALIGNMENT 40 YS2-20k17.q1k vc_4 174 213 5832 5871 F 40 100.00 213 reject_low 5 ALIGNMENT 0 YS2-20k17.q1k vc_3 173 62 2512 2511 C 112 0.00 213 reject_low 4 ALIGNMENT 39 YS2-20k17.q1k vc_5 213 175 5025 5063 C 39 100.00 213 reject_low 6 ALIGNMENT 38 YS2-20k17.q1k vc_7 176 213 13525 13562 F 38 100.00 213 reject_low 7 ALIGNMENT 117 YS2-20k17.q1k chr07 39 173 454602 454736 F 135 97.78 213 accept_chi 1 ALIGNMENT 40 YS2-20k17.q1k vc_1 213 174 2472 2511 C 40 100.00 213 reject_low 2 ALIGNMENT 314 YS2-20k18.p1k chr02 916 78 223236 224074 C 839 79.98 1322 ambiguous_trans 22 ALIGNMENT 0 YS2-20k18.p1k chr02 77 62 224075 224074 C 16 0.00 1322 ambiguous_trans 22 ALIGNMENT 317 YS2-20k18.p1k chr10 916 78 474577 475415 C 839 80.10 1322 ambiguous_trans 14 ALIGNMENT 967 YS2-20k18.p1k chr12 35 1157 978631 979769 F 1123 96.71 1322 ambiguous_trans 3 ALIGNMENT 931 YS2-20k18.p1k chr04 1157 35 983092 984230 C 1123 95.81 1322 ambiguous_trans 12 ALIGNMENT 970 YS2-20k18.p1k chr15 35 1157 706958 708096 F 1123 96.79 1322 ambiguous_trans 1 ALIGNMENT 941 YS2-20k18.q1k chr12 1106 53 169407 170459 C 1054 97.63 1246 accept 0 ALIGNMENT 314 YS2-20k18.p1k chr16 78 916 807524 808362 F 839 79.98 1322 ambiguous_trans 17 ALIGNMENT 960 YS2-20k18.p1k chr07 35 1157 571638 572777 F 1123 96.53 1322 ambiguous_trans 6 ALIGNMENT 0 YS2-20k18.p1k chr16 62 77 853512 853511 F 16 0.00 1322 ambiguous_trans 21 ALIGNMENT 943 YS2-20k18.p1k chr06 1157 35 139835 140973 C 1123 96.17 1322 ambiguous_trans 7 ALIGNMENT 943 YS2-20k18.p1k chr07 1157 35 813379 814517 C 1123 96.17 1322 ambiguous_trans 8 ALIGNMENT 20 YS2-20k18.p1k chr13 1044 1005 186235 186275 C 40 85.00 1322 ambiguous_trans 23 ALIGNMENT 0 YS2-20k18.p1k chr13 1004 917 198443 198530 C 88 0.00 1322 ambiguous_trans 24 ALIGNMENT 309 YS2-20k18.p1k chr16 916 78 846608 847449 C 839 79.86 1322 ambiguous_trans 20 ALIGNMENT 940 YS2-20k18.p1k chr12 1157 35 943116 944254 C 1123 96.08 1322 ambiguous_trans 10 ALIGNMENT 314 YS2-20k18.p1k chr13 916 78 186364 187202 C 839 79.98 1322 ambiguous_trans 23 ALIGNMENT 314 YS2-20k18.p1k chr10 916 78 480161 480999 C 839 79.98 1322 ambiguous_trans 15 ALIGNMENT 311 YS2-20k18.p1k chr12 78 916 217968 218806 F 839 79.86 1322 ambiguous_trans_ua 18 ALIGNMENT 314 YS2-20k18.p1k chr15 916 78 597015 597853 C 839 79.98 1322 ambiguous_trans 16 ALIGNMENT 20 YS2-20k18.p1k chr13 1044 1005 198402 198442 C 40 85.00 1322 ambiguous_trans 24 ALIGNMENT 314 YS2-20k18.p1k chr13 916 78 198531 199369 C 839 79.98 1322 ambiguous_trans 24 ALIGNMENT 970 YS2-20k18.p1k chr15 1157 35 972209 973347 C 1123 96.97 1322 ambiguous_trans 2 ALIGNMENT 0 YS2-20k18.p1k chr02 1004 917 223148 223235 C 88 0.00 1322 ambiguous_trans 22 ALIGNMENT 961 YS2-20k18.p1k chr04 1157 35 873743 874881 C 1123 96.71 1322 ambiguous_trans 5 ALIGNMENT 305 YS2-20k18.p1k chr16 78 916 853512 854350 F 839 79.62 1322 ambiguous_trans 21 ALIGNMENT 940 YS2-20k18.p1k chr04 35 1157 516578 517716 F 1123 95.90 1322 ambiguous_trans 9 ALIGNMENT 0 YS2-20k18.p1k chr15 77 62 597854 597853 C 16 0.00 1322 ambiguous_trans 16 ALIGNMENT 0 YS2-20k18.p1k chr13 77 62 199370 199369 C 16 0.00 1322 ambiguous_trans 24 ALIGNMENT 0 YS2-20k18.p1k chr10 77 62 475416 475415 C 16 0.00 1322 ambiguous_trans 14 ALIGNMENT 928 YS2-20k18.p1k chr02 1157 35 31568 32706 C 1123 95.73 1322 ambiguous_trans 13 ALIGNMENT 0 YS2-20k18.p1k chr12 62 77 217968 217967 F 16 0.00 1322 ambiguous_trans_ua 18 ALIGNMENT 967 YS2-20k18.p1k chr14 35 1157 564927 566065 F 1123 96.71 1322 ambiguous_trans 4 ALIGNMENT 0 YS2-20k18.p1k chr10 77 62 481000 480999 C 16 0.00 1322 ambiguous_trans 15 ALIGNMENT 0 YS2-20k18.p1k chr12 62 77 478861 478860 F 16 0.00 1322 ambiguous_trans 19 ALIGNMENT 0 YS2-20k18.p1k chr16 62 77 807524 807523 F 16 0.00 1322 ambiguous_trans 17 ALIGNMENT 0 YS2-20k18.p1k chr16 77 62 847450 847449 C 16 0.00 1322 ambiguous_trans 20 ALIGNMENT 0 YS2-20k18.p1k chr13 1004 917 186276 186363 C 88 0.00 1322 ambiguous_trans 23 ALIGNMENT 311 YS2-20k18.p1k chr12 78 916 478861 479699 F 839 79.86 1322 ambiguous_trans 19 ALIGNMENT 20 YS2-20k18.p1k chr02 1044 1005 223107 223147 C 40 85.00 1322 ambiguous_trans 22 ALIGNMENT 940 YS2-20k18.p1k chr03 1140 35 86756 87875 C 1106 96.47 1322 ambiguous_trans 11 ALIGNMENT 0 YS2-20k18.p1k chr13 77 62 187203 187202 C 16 0.00 1322 ambiguous_trans 23 ALIGNMENT 452 YS2-20k19.p1k vc_2 711 1 1052 1749 C 711 89.45 714 reject_vc 3 ALIGNMENT 0 YS2-20k19.q1k vc_4 62 186 5831 5830 F 125 0.00 227 reject_low 10 ALIGNMENT 40 YS2-20k19.q1k vc_5 227 185 5025 5067 C 43 97.67 227 reject_low 11 ALIGNMENT 145 YS2-20k19.q1k chr02 186 30 280988 281145 C 157 98.73 227 accept 7 ALIGNMENT 41 YS2-20k19.q1k vc_4 187 227 5831 5871 F 41 100.00 227 reject_low 10 ALIGNMENT 0 YS2-20k19.q1k chr02 227 187 280989 280988 C 41 0.00 227 accept 7 ALIGNMENT 455 YS2-20k19.p1k vc_5 711 1 3972 4669 C 711 89.59 714 reject_vc 0 ALIGNMENT 41 YS2-20k19.q1k vc_1 227 187 2472 2512 C 41 100.00 227 reject_low 8 ALIGNMENT 0 YS2-20k19.q1k vc_3 186 62 2513 2512 C 125 0.00 227 reject_low 9 ALIGNMENT 446 YS2-20k19.p1k vc_7 1 711 456 1153 F 711 89.17 714 reject_vc 5 ALIGNMENT 452 YS2-20k19.p1k vc_1 711 1 1052 1749 C 711 89.45 714 reject_vc 2 ALIGNMENT 41 YS2-20k19.q1k vc_3 227 187 2472 2512 C 41 100.00 227 reject_low 9 ALIGNMENT 446 YS2-20k19.p1k vc_7 1 711 13918 14615 F 711 89.17 714 reject_vc 6 ALIGNMENT 37 YS2-20k19.q1k vc_5 224 185 1 40 C 40 97.50 227 reject_low 13 ALIGNMENT 0 YS2-20k19.q1k vc_5 184 62 41 40 C 123 0.00 227 reject_low 13 ALIGNMENT 0 YS2-20k19.q1k vc_7 62 189 13525 13524 F 128 0.00 227 reject_low 12 ALIGNMENT 0 YS2-20k19.q1k vc_1 186 62 2513 2512 C 125 0.00 227 reject_low 8 ALIGNMENT 0 YS2-20k19.q1k vc_5 184 62 5068 5067 C 123 0.00 227 reject_low 11 ALIGNMENT 455 YS2-20k19.p1k vc_6 1 711 3712 4409 F 711 89.59 714 reject_vc 1 ALIGNMENT 452 YS2-20k19.p1k vc_3 711 1 1052 1749 C 711 89.45 714 reject_vc 4 ALIGNMENT 38 YS2-20k19.q1k vc_7 190 227 13525 13562 F 38 100.00 227 reject_low 12 ALIGNMENT 933 YS2-20k20.p1k chr11 1134 43 597324 598440 C 1092 96.25 1261 accept 0 ALIGNMENT 949 YS2-20k21.q1k chr15 41 1141 803041 804124 F 1101 96.91 1146 accept 0 ALIGNMENT 880 YS2-20k21.p1k chr15 1045 30 803611 804640 C 1016 97.24 1251 accept 0 ALIGNMENT 36 YS2-20k22.q1k vc_5 271 236 1 36 C 36 100.00 274 reject_low 7 ALIGNMENT 0 YS2-20k22.p1k chrm 237 255 13955 13954 F 19 0.00 255 accept_chi 0 ALIGNMENT 0 YS2-20k22.q1k chrm 274 225 13759 13758 C 50 0.00 274 accept_chi 1 ALIGNMENT 170 YS2-20k22.p1k chrm 39 236 13758 13955 F 198 99.49 255 accept_chi 0 ALIGNMENT 39 YS2-20k22.q1k vc_5 274 236 5025 5063 C 39 100.00 274 reject_low 5 ALIGNMENT 167 YS2-20k22.q1k chrm 224 28 13758 13955 C 197 99.49 274 accept_chi 1 ALIGNMENT 0 YS2-20k22.q1k vc_4 62 234 5832 5831 F 173 0.00 274 reject_low 4 ALIGNMENT 0 YS2-20k22.q1k vc_3 234 62 2512 2511 C 173 0.00 274 reject_low 3 ALIGNMENT 0 YS2-20k22.q1k vc_5 235 62 37 36 C 174 0.00 274 reject_low 7 ALIGNMENT 38 YS2-20k22.q1k vc_7 237 274 13525 13562 F 38 100.00 274 reject_low 6 ALIGNMENT 40 YS2-20k22.q1k vc_3 274 235 2472 2511 C 40 100.00 274 reject_low 3 ALIGNMENT 40 YS2-20k22.q1k vc_1 274 235 2472 2511 C 40 100.00 274 reject_low 2 ALIGNMENT 0 YS2-20k22.q1k vc_5 235 62 5064 5063 C 174 0.00 274 reject_low 5 ALIGNMENT 0 YS2-20k22.q1k vc_1 234 62 2512 2511 C 173 0.00 274 reject_low 2 ALIGNMENT 40 YS2-20k22.q1k vc_4 235 274 5832 5871 F 40 100.00 274 reject_low 4 ALIGNMENT 0 YS2-20k22.q1k vc_7 62 236 13525 13524 F 175 0.00 274 reject_low 6 ALIGNMENT 94 YS2-20k24.p1k chr06 619 512 31622 31729 C 108 98.15 1286 reject_low 5 ALIGNMENT 119 YS2-20k24.q1k chr12 572 454 482044 482162 C 119 100.00 1115 reject_low 3 ALIGNMENT 98 YS2-20k24.p1k chr12 879 997 472464 472582 F 119 94.96 1286 reject_low 3,4 ALIGNMENT 505 YS2-20k24.q1k chr12 1065 454 468332 468930 C 612 96.41 1115 reject_low 1 ALIGNMENT 0 YS2-20k24.p1k chr12 62 878 489348 489347 F 817 0.00 1286 reject_low 8 ALIGNMENT 0 YS2-20k24.q1k chr12 453 62 482163 482162 C 392 0.00 1115 reject_low 3 ALIGNMENT 0 YS2-20k24.q1k chr12 447 62 489473 489472 C 386 0.00 1115 reject_low 2 ALIGNMENT 98 YS2-20k24.p1k chr12 879 997 485696 485814 F 119 94.96 1286 reject_low 9 ALIGNMENT 0 YS2-20k24.p1k chr06 511 62 31730 31729 C 450 0.00 1286 reject_low 5 ALIGNMENT 0 YS2-20k24.q1k chr12 823 573 482045 482044 C 251 0.00 1115 reject_low 3 ALIGNMENT 963 YS2-20k24.p1k chr12 35 1199 458831 460015 F 1165 95.54 1286 accept 0 ALIGNMENT 125 YS2-20k24.q1k chr12 572 448 489348 489472 C 125 100.00 1115 reject_low 2 ALIGNMENT 0 YS2-20k24.q1k chr12 823 573 472465 472464 C 251 0.00 1115 reject_low 7 ALIGNMENT 0 YS2-20k24.p1k chr06 863 620 31623 31622 C 244 0.00 1286 reject_low 5 ALIGNMENT 0 YS2-20k24.q1k chr12 453 62 485815 485814 C 392 0.00 1115 reject_low 4 ALIGNMENT 0 YS2-20k24.p1k chr12 62 878 472464 472463 F 817 0.00 1286 reject_low 3,4 ALIGNMENT 0 YS2-20k24.p1k chr12 62 878 482044 482043 F 817 0.00 1286 reject_low 2 ALIGNMENT 0 YS2-20k24.q1k chr12 823 573 489349 489348 C 251 0.00 1115 reject_low 2 ALIGNMENT 119 YS2-20k24.q1k chr12 572 454 472464 472582 C 119 100.00 1115 reject_low 7 ALIGNMENT 98 YS2-20k24.p1k chr12 879 997 482044 482162 F 119 94.96 1286 reject_low 2 ALIGNMENT 0 YS2-20k24.q1k chr12 453 62 468931 468930 C 392 0.00 1115 reject_low 1 ALIGNMENT 0 YS2-20k24.q1k chr12 453 62 472583 472582 C 392 0.00 1115 reject_low 7 ALIGNMENT 882 YS2-20k24.p1k chr12 35 997 467968 468930 F 963 98.55 1286 reject_low 1 ALIGNMENT 104 YS2-20k24.p1k chr12 879 1011 489348 489480 F 133 92.48 1286 reject_low 8 ALIGNMENT 0 YS2-20k24.q1k chr12 823 573 485697 485696 C 251 0.00 1115 reject_low 4 ALIGNMENT 0 YS2-20k24.p1k chr12 62 878 485696 485695 F 817 0.00 1286 reject_low 9 ALIGNMENT 0 YS2-20k24.q1k chr06 62 831 31622 31621 F 770 0.00 1115 reject_low 6 ALIGNMENT 820 YS2-20k24.q1k chr12 1065 57 459195 460202 C 1009 95.94 1115 accept 0 ALIGNMENT 119 YS2-20k24.q1k chr12 572 454 485696 485814 C 119 100.00 1115 reject_low 4 ALIGNMENT 92 YS2-20k24.q1k chr06 832 939 31622 31729 F 108 97.22 1115 reject_low 6 ALIGNMENT 41 YS2-20l01.q1k vc_2 282 242 2105 2145 C 41 100.00 282 reject_low 2 ALIGNMENT 39 YS2-20l01.q1k vc_5 282 244 5025 5063 C 39 100.00 282 reject_low 5 ALIGNMENT 0 YS2-20l01.q1k vc_5 243 62 37 36 C 182 0.00 282 reject_low 7 ALIGNMENT 189 YS2-20l01.q1k chr07 242 44 914614 914813 C 199 98.49 282 accept 0 ALIGNMENT 0 YS2-20l01.q1k vc_4 62 241 5831 5830 F 180 0.00 282 reject_low 4 ALIGNMENT 0 YS2-20l01.q1k vc_1 241 62 2513 2512 C 180 0.00 282 reject_low 1 ALIGNMENT 0 YS2-20l01.q1k vc_3 241 62 2513 2512 C 180 0.00 282 reject_low 3 ALIGNMENT 41 YS2-20l01.q1k vc_4 242 282 5831 5871 F 41 100.00 282 reject_low 4 ALIGNMENT 36 YS2-20l01.q1k vc_5 279 244 1 36 C 36 100.00 282 reject_low 7 ALIGNMENT 0 YS2-20l01.q1k chr07 282 243 914615 914614 C 40 0.00 282 accept 0 ALIGNMENT 0 YS2-20l01.q1k vc_5 243 62 5064 5063 C 182 0.00 282 reject_low 5 ALIGNMENT 38 YS2-20l01.q1k vc_7 245 282 13525 13562 F 38 100.00 282 reject_low 6 ALIGNMENT 0 YS2-20l01.q1k vc_2 241 62 2146 2145 C 180 0.00 282 reject_low 2 ALIGNMENT 41 YS2-20l01.q1k vc_1 282 242 2472 2512 C 41 100.00 282 reject_low 1 ALIGNMENT 41 YS2-20l01.q1k vc_3 282 242 2472 2512 C 41 100.00 282 reject_low 3 ALIGNMENT 0 YS2-20l01.q1k vc_7 62 244 13525 13524 F 183 0.00 282 reject_low 6 ALIGNMENT 0 YS2-20l02.q1k vc_5 290 62 5064 5063 C 229 0.00 329 reject_low 13 ALIGNMENT 36 YS2-20l02.q1k vc_5 326 291 1 36 C 36 100.00 329 reject_low 15 ALIGNMENT 366 YS2-20l02.p1k vc_3 692 1 1064 1749 C 692 86.71 701 reject_vc 5 ALIGNMENT 364 YS2-20l02.p1k vc_6 1 516 3712 4223 F 516 91.28 701 reject_vc 8 ALIGNMENT 40 YS2-20l02.q1k vc_1 329 290 2472 2511 C 40 100.00 329 reject_low 9 ALIGNMENT 0 YS2-20l02.q1k vc_3 289 62 2512 2511 C 228 0.00 329 reject_low 11 ALIGNMENT 40 YS2-20l02.q1k vc_4 290 329 5832 5871 F 40 100.00 329 reject_low 12 ALIGNMENT 252 YS2-20l02.q1k chr12 39 291 453335 453587 F 253 100.00 329 accept 0 ALIGNMENT 38 YS2-20l02.q1k vc_7 292 329 13525 13562 F 38 100.00 329 reject_low 14 ALIGNMENT 0 YS2-20l02.q1k chr12 292 329 453587 453586 F 38 0.00 329 accept 0 ALIGNMENT 366 YS2-20l02.p1k vc_2 692 1 1064 1749 C 692 86.71 701 reject_vc 4 ALIGNMENT 0 YS2-20l02.q1k vc_2 289 62 2145 2144 C 228 0.00 329 reject_low 10 ALIGNMENT 366 YS2-20l02.p1k vc_1 692 1 1064 1749 C 692 86.71 701 reject_vc 3 ALIGNMENT 39 YS2-20l02.q1k vc_5 329 291 5025 5063 C 39 100.00 329 reject_low 13 ALIGNMENT 0 YS2-20l02.q1k vc_7 62 291 13525 13524 F 230 0.00 329 reject_low 14 ALIGNMENT 0 YS2-20l02.q1k vc_1 289 62 2512 2511 C 228 0.00 329 reject_low 9 ALIGNMENT 252 YS2-20l02.q1k chr12 39 291 462472 462724 F 253 100.00 329 accept 1 ALIGNMENT 369 YS2-20l02.p1k vc_5 692 1 3984 4669 C 692 86.85 701 reject_vc 2 ALIGNMENT 361 YS2-20l02.p1k vc_7 1 692 456 1141 F 692 86.42 701 reject_vc 6 ALIGNMENT 361 YS2-20l02.p1k vc_7 1 692 13918 14603 F 692 86.42 701 reject_vc 7 ALIGNMENT 0 YS2-20l02.q1k chr12 292 329 462724 462723 F 38 0.00 329 accept 1 ALIGNMENT 40 YS2-20l02.q1k vc_2 329 290 2105 2144 C 40 100.00 329 reject_low 10 ALIGNMENT 40 YS2-20l02.q1k vc_3 329 290 2472 2511 C 40 100.00 329 reject_low 11 ALIGNMENT 0 YS2-20l02.q1k vc_4 62 289 5832 5831 F 228 0.00 329 reject_low 12 ALIGNMENT 0 YS2-20l02.q1k vc_5 290 62 37 36 C 229 0.00 329 reject_low 15 ALIGNMENT 0 YS2-20l03.q1k vc_1 566 390 2473 2472 C 177 0.00 1301 reject_low 11 ALIGNMENT 0 YS2-20l03.q1k vc_4 388 92 5813 5812 C 297 0.00 1301 reject_low 6 ALIGNMENT 0 YS2-20l03.q1k vc_4 388 92 1535 1534 C 297 0.00 1301 reject_low 10 ALIGNMENT 0 YS2-20l03.q1k vc_4 551 566 6514 6513 F 16 0.00 1301 reject_low 8 ALIGNMENT 41 YS2-20l03.q1k vc_3 389 349 2472 2512 C 41 100.00 1301 reject_low 13 ALIGNMENT 0 YS2-20l03.q1k vc_5 92 388 2398 2397 F 297 0.00 1301 reject_low 5 ALIGNMENT 0 YS2-20l03.q1k vc_5 566 390 5026 5025 C 177 0.00 1301 reject_low 14 ALIGNMENT 0 YS2-20l03.q1k vc_2 92 388 2164 2163 F 297 0.00 1301 reject_low 3 ALIGNMENT 0 YS2-20l03.q1k vc_7 92 351 13525 13524 F 260 0.00 1301 reject_low 16 ALIGNMENT 148 YS2-20l03.q1k vc_4 389 550 126 287 F 162 97.53 1301 reject_low 7 ALIGNMENT 0 YS2-20l03.q1k vc_2 566 390 2106 2105 C 177 0.00 1301 reject_low 12 ALIGNMENT 38 YS2-20l03.q1k vc_7 352 389 13525 13562 F 38 100.00 1301 reject_low 16 ALIGNMENT 38 YS2-20l03.q1k vc_7 352 389 63 100 F 38 100.00 1301 reject_low 15 ALIGNMENT 0 YS2-20l03.q1k vc_7 390 566 100 99 F 177 0.00 1301 reject_low 15 ALIGNMENT 36 YS2-20l03.q1k vc_5 386 351 1 36 C 36 100.00 1301 reject_low 17 ALIGNMENT 0 YS2-20l03.q1k vc_4 92 348 5831 5830 F 257 0.00 1301 reject_low 8 ALIGNMENT 39 YS2-20l03.q1k vc_5 389 351 5025 5063 C 39 100.00 1301 reject_low 14 ALIGNMENT 0 YS2-20l03.q1k vc_7 388 92 2728 2727 C 297 0.00 1301 reject_low 1 ALIGNMENT 303 YS2-20l03.q1k vc_1 389 837 2531 2976 F 449 90.20 1301 reject_low 2 ALIGNMENT 0 YS2-20l03.q1k vc_1 348 92 2513 2512 C 257 0.00 1301 reject_low 11 ALIGNMENT 0 YS2-20l03.q1k vc_5 350 92 37 36 C 259 0.00 1301 reject_low 17 ALIGNMENT 0 YS2-20l03.q1k vc_3 348 92 2513 2512 C 257 0.00 1301 reject_low 13 ALIGNMENT 303 YS2-20l03.q1k vc_3 389 837 2531 2976 F 449 90.20 1301 reject_low 4 ALIGNMENT 0 YS2-20l03.q1k vc_7 599 600 5172 6360 C 0 0.00 1301 reject_low 9 ALIGNMENT 304 YS2-20l03.q1k vc_7 837 389 2282 2727 C 449 90.20 1301 reject_low 1 ALIGNMENT 41 YS2-20l03.q1k vc_1 389 349 2472 2512 C 41 100.00 1301 reject_low 11 ALIGNMENT 303 YS2-20l03.q1k vc_2 389 837 2164 2609 F 449 90.20 1301 reject_low 3 ALIGNMENT 284 YS2-20l03.q1k chr13 32 349 618067 618384 F 318 98.43 1301 accept 0 ALIGNMENT 0 YS2-20l03.q1k vc_1 92 388 2531 2530 F 297 0.00 1301 reject_low 2 ALIGNMENT 0 YS2-20l03.q1k vc_3 92 388 2531 2530 F 297 0.00 1301 reject_low 4 ALIGNMENT 85 YS2-20l03.q1k vc_4 477 389 1446 1534 C 89 98.88 1301 reject_low 10 ALIGNMENT 0 YS2-20l03.q1k vc_7 390 566 13562 13561 F 177 0.00 1301 reject_low 16 ALIGNMENT 41 YS2-20l03.q1k vc_4 349 389 5831 5871 F 41 100.00 1301 reject_low 8 ALIGNMENT 0 YS2-20l03.q1k vc_7 548 92 6412 6411 C 457 0.00 1301 reject_low 9 ALIGNMENT 41 YS2-20l03.q1k vc_2 389 349 2105 2145 C 41 100.00 1301 reject_low 12 ALIGNMENT 0 YS2-20l03.q1k vc_4 551 566 287 286 F 16 0.00 1301 reject_low 7 ALIGNMENT 0 YS2-20l03.q1k chr13 350 566 618384 618383 F 217 0.00 1301 accept 0 ALIGNMENT 0 YS2-20l03.q1k vc_5 350 92 5064 5063 C 259 0.00 1301 reject_low 14 ALIGNMENT 0 YS2-20l03.q1k vc_7 92 351 63 62 F 260 0.00 1301 reject_low 15 ALIGNMENT 303 YS2-20l03.q1k vc_5 389 837 2398 2843 F 449 90.20 1301 reject_low 5 ALIGNMENT 0 YS2-20l03.q1k vc_4 566 478 1447 1446 C 89 0.00 1301 reject_low 10 ALIGNMENT 0 YS2-20l03.q1k vc_4 92 388 126 125 F 297 0.00 1301 reject_low 7 ALIGNMENT 0 YS2-20l03.q1k vc_2 348 92 2146 2145 C 257 0.00 1301 reject_low 12 ALIGNMENT 0 YS2-20l03.q1k vc_4 390 389 5872 6353 F 0 0.00 1301 reject_low 8 ALIGNMENT 108 YS2-20l03.q1k vc_7 837 599 4937 5172 C 239 83.26 1301|0,1 reject_low 9 ALIGNMENT 148 YS2-20l03.q1k vc_4 389 550 6353 6514 F 162 97.53 1301|1,0 reject_low 8 ALIGNMENT 48 YS2-20l03.q1k vc_7 600 549 6360 6411 C 52 98.08 1301|1,0 reject_low 9 ALIGNMENT 297 YS2-20l03.q1k vc_4 837 389 5365 5812 C 449 89.76 1301 reject_low 6 ALIGNMENT 0 YS2-20l03.q1k vc_3 566 390 2473 2472 C 177 0.00 1301 reject_low 13 ALIGNMENT 0 YS2-20l03.q1k vc_5 566 387 2 1 C 180 0.00 1301 reject_low 17 ALIGNMENT 0 YS2-20l04.q1k vc_5 358 62 37 36 C 297 0.00 397 reject_low 7 ALIGNMENT 0 YS2-20l04.q1k vc_2 356 62 2146 2145 C 295 0.00 397 reject_low 2 ALIGNMENT 0 YS2-20l04.q1k vc_4 62 356 5831 5830 F 295 0.00 397 reject_low 4 ALIGNMENT 0 YS2-20l04.q1k vc_3 356 62 2513 2512 C 295 0.00 397 reject_low 3 ALIGNMENT 64 YS2-20l04.p1k chr13 125 27 618289 618384 C 99 91.92 1422 reject_bad_break 0 ALIGNMENT 41 YS2-20l04.q1k vc_4 357 397 5831 5871 F 41 100.00 397 reject_low 4 ALIGNMENT 39 YS2-20l04.q1k vc_5 397 359 5025 5063 C 39 100.00 397 reject_low 5 ALIGNMENT 0 YS2-20l04.q1k chr13 358 397 618384 618383 F 40 0.00 397 reject_bad_break 0 ALIGNMENT 291 YS2-20l04.q1k chr13 39 357 618067 618384 F 319 99.37 397 reject_bad_break 0 ALIGNMENT 0 YS2-20l04.p1k chr13 257 126 618192 618288 C 132 0.00 1422 reject_bad_break 0 ALIGNMENT 0 YS2-20l04.q1k vc_7 62 359 13525 13524 F 298 0.00 397 reject_low 6 ALIGNMENT 41 YS2-20l04.q1k vc_1 397 357 2472 2512 C 41 100.00 397 reject_low 1 ALIGNMENT 41 YS2-20l04.q1k vc_2 397 357 2105 2145 C 41 100.00 397 reject_low 2 ALIGNMENT 0 YS2-20l04.q1k vc_5 358 62 5064 5063 C 297 0.00 397 reject_low 5 ALIGNMENT 0 YS2-20l04.q1k vc_1 356 62 2513 2512 C 295 0.00 397 reject_low 1 ALIGNMENT 44 YS2-20l04.p1k chr13 322 258 618128 618191 C 65 93.85 1422 reject_bad_break 0 ALIGNMENT 38 YS2-20l04.q1k vc_7 360 397 13525 13562 F 38 100.00 397 reject_low 6 ALIGNMENT 36 YS2-20l04.q1k vc_5 394 359 1 36 C 36 100.00 397 reject_low 7 ALIGNMENT 41 YS2-20l04.q1k vc_3 397 357 2472 2512 C 41 100.00 397 reject_low 3 ALIGNMENT 948 YS2-20l05.q1k chr15 1105 37 1046705 1047786 C 1069 97.57 1198 accept 0 ALIGNMENT 41 YS2-20l06.q1k vc_3 466 426 2472 2512 C 41 100.00 466 reject_low 4 ALIGNMENT 36 YS2-20l06.q1k vc_5 463 428 1 36 C 36 100.00 466 reject_low 8 ALIGNMENT 0 YS2-20l06.q1k vc_4 62 425 5831 5830 F 364 0.00 466 reject_low 5 ALIGNMENT 0 YS2-20l06.q1k vc_2 425 62 2146 2145 C 364 0.00 466 reject_low 3 ALIGNMENT 0 YS2-20l06.q1k vc_3 425 62 2513 2512 C 364 0.00 466 reject_low 4 ALIGNMENT 41 YS2-20l06.q1k vc_2 466 426 2105 2145 C 41 100.00 466 reject_low 3 ALIGNMENT 0 YS2-20l06.q1k vc_1 425 62 2513 2512 C 364 0.00 466 reject_low 2 ALIGNMENT 0 YS2-20l06.q1k vc_5 427 62 37 36 C 366 0.00 466 reject_low 8 ALIGNMENT 356 YS2-20l06.p1k chr16 417 30 533385 533772 C 388 99.48 435 accept_chi 0 ALIGNMENT 0 YS2-20l06.q1k vc_5 427 62 5064 5063 C 366 0.00 466 reject_low 6 ALIGNMENT 356 YS2-20l06.q1k chr16 38 425 533385 533772 F 388 99.48 466 accept_chi 1 ALIGNMENT 39 YS2-20l06.q1k vc_5 466 428 5025 5063 C 39 100.00 466 reject_low 6 ALIGNMENT 0 YS2-20l06.q1k vc_7 62 428 13525 13524 F 367 0.00 466 reject_low 7 ALIGNMENT 41 YS2-20l06.q1k vc_1 466 426 2472 2512 C 41 100.00 466 reject_low 2 ALIGNMENT 38 YS2-20l06.q1k vc_7 429 466 13525 13562 F 38 100.00 466 reject_low 7 ALIGNMENT 0 YS2-20l06.p1k chr16 435 418 533386 533385 C 18 0.00 435 accept_chi 0 ALIGNMENT 41 YS2-20l06.q1k vc_4 426 466 5831 5871 F 41 100.00 466 reject_low 5 ALIGNMENT 0 YS2-20l06.q1k chr16 426 466 533772 533771 F 41 0.00 466 accept_chi 1 ALIGNMENT 990 YS2-20l07.q1k chr13 31 1177 481635 482791 F 1147 96.51 1200 accept 0 ALIGNMENT 1042 YS2-20l07.p1k chr13 1214 33 482671 483855 C 1182 97.21 1360 accept 0 ALIGNMENT 972 YS2-20l08.p1k chr10 33 1132 645286 646392 F 1100 96.36 1323 accept 0 ALIGNMENT 964 YS2-20l09.q1k chr14 40 1147 412988 414104 F 1108 96.93 1219 accept 0 ALIGNMENT 959 YS2-20l09.p1k chr14 1252 31 414920 416135 C 1222 95.01 1412 accept 0 ALIGNMENT 43 YS2-20l10.p1k chr12 42 127 7589 7674 F 86 83.72 1356 reject_low 143 ALIGNMENT 49 YS2-20l10.p1k chr16 33 127 1593 1687 F 95 84.21 1356 reject_low 94 ALIGNMENT 49 YS2-20l10.p1k chr13 33 127 1813 1907 F 95 84.21 1356 reject_low 89 ALIGNMENT 49 YS2-20l10.p1k chr16 127 33 946146 946240 C 95 84.21 1356 reject_low 96 ALIGNMENT 34 YS2-20l10.p1k chr05 42 127 1589 1674 F 86 80.23 1356 reject_low 171 ALIGNMENT 58 YS2-20l10.p1k chr05 34 129 1617 1712 F 96 87.50 1356 reject_low 64 ALIGNMENT 76 YS2-20l10.p1k chr02 34 129 2173 2268 F 96 93.75 1356 reject_low 35 ALIGNMENT 45 YS2-20l10.p1k chr12 34 127 7329 7422 F 94 82.98 1356 reject_low 115 ALIGNMENT 54 YS2-20l10.p1k chr02 34 127 1741 1834 F 94 86.17 1356 reject_low 72 ALIGNMENT 0 YS2-20l10.p1k chr10 112 842 2361 2360 F 731 0.00 1356 reject_low 165 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 7458 7457 F 715 0.00 1356 reject_low 142 ALIGNMENT 51 YS2-20l10.p1k chr02 34 127 2245 2338 F 94 85.11 1356 reject_low 99 ALIGNMENT 43 YS2-20l10.p1k chr14 42 127 1621 1706 F 86 83.72 1356 reject_low 148 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 2031 2030 F 715 0.00 1356 reject_low 81 ALIGNMENT 0 YS2-20l10.p1k chr12 101 62 1076691 1076690 C 40 0.00 1356 reject_low 191 ALIGNMENT 955 YS2-20l10.p1k chr16 1242 42 944844 946051 C 1201 94.50 1356 ambiguous_tel 2 ALIGNMENT 0 YS2-20l10.p1k chr02 138 842 2168 2167 F 705 0.00 1356 reject_low 109 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 7566 7565 F 715 0.00 1356 reject_low 83 ALIGNMENT 0 YS2-20l10.p1k chr16 842 128 946435 946434 C 715 0.00 1356 reject_low 199 ALIGNMENT 0 YS2-20l10.p1k chr04 842 138 1530203 1530202 C 705 0.00 1356 reject_low 20 ALIGNMENT 0 YS2-20l10.p1k chr09 128 842 1926 1925 F 715 0.00 1356 reject_low 130 ALIGNMENT 34 YS2-20l10.p1k chr06 35 111 1185 1261 F 77 81.82 1356 reject_low 163 ALIGNMENT 0 YS2-20l10.p1k chr13 128 842 1799 1798 F 715 0.00 1356 reject_low 146 ALIGNMENT 0 YS2-20l10.p1k chr05 842 138 575284 575283 C 705 0.00 1356 reject_low 185 ALIGNMENT 0 YS2-20l10.p1k chr07 842 128 1089263 1089262 C 715 0.00 1356 reject_low 139 ALIGNMENT 0 YS2-20l10.p1k chr05 128 842 1638 1637 F 715 0.00 1356 reject_low 73 ALIGNMENT 42 YS2-20l10.p1k chr09 34 127 1833 1926 F 94 81.91 1356 reject_low 130 ALIGNMENT 25 YS2-20l10.p1k chr12 102 137 7325 7360 F 36 91.67 1356 reject_low 189 ALIGNMENT 72 YS2-20l10.p1k chr12 34 127 1830 1923 F 94 92.55 1356 reject_low 40 ALIGNMENT 0 YS2-20l10.p1k chr16 842 138 946281 946280 C 705 0.00 1356 reject_low 69 ALIGNMENT 25 YS2-20l10.p1k chr12 137 102 1076655 1076690 C 36 91.67 1356 reject_low 191 ALIGNMENT 0 YS2-20l10.p1k chr06 112 842 1261 1260 F 731 0.00 1356 reject_low 163 ALIGNMENT 21 YS2-20l10.p1k chr05 42 136 1913 2007 F 95 74.74 1356 reject_low 200 ALIGNMENT 34 YS2-20l10.p1k chr05 127 42 575149 575234 C 86 80.23 1356 reject_low 172 ALIGNMENT 0 YS2-20l10.p1k chr05 128 842 1890 1889 F 715 0.00 1356 reject_low 134 ALIGNMENT 43 YS2-20l10.p1k chr02 42 127 1569 1654 F 86 83.72 1356 reject_low 132 ALIGNMENT 0 YS2-20l10.p1k chr02 128 842 1834 1833 F 715 0.00 1356 reject_low 72 ALIGNMENT 81 YS2-20l10.p1k chr14 34 137 1757 1860 F 104 93.27 1356 reject_low 27 ALIGNMENT 0 YS2-20l10.p1k chr12 842 138 1076656 1076655 C 705 0.00 1356 reject_low 191 ALIGNMENT 49 YS2-20l10.p1k chr12 33 127 7436 7530 F 95 84.21 1356 reject_low 82 ALIGNMENT 34 YS2-20l10.p1k chr12 127 42 1076521 1076606 C 86 80.23 1356 reject_low 177 ALIGNMENT 0 YS2-20l10.p1k chr05 137 842 2007 2006 F 706 0.00 1356 reject_low 200 ALIGNMENT 70 YS2-20l10.p1k chr16 127 42 946074 946159 C 86 94.19 1356 reject_low 53 ALIGNMENT 84 YS2-20l10.p1k chr06 34 137 1004 1107 F 104 94.23 1356|0,3 reject_low 18 ALIGNMENT 51 YS2-20l10.p1k chr08 34 127 1726 1819 F 94 85.11 1356 reject_low 100 ALIGNMENT 0 YS2-20l10.p1k chr05 842 138 575032 575031 C 705 0.00 1356 reject_low 21 ALIGNMENT 0 YS2-20l10.p1k chr06 135 134 1105 1260 F 0 0.00 1356 reject_low 18 ALIGNMENT 43 YS2-20l10.p1k chr04 127 42 1530356 1530441 C 86 83.72 1356 reject_low 133 ALIGNMENT 0 YS2-20l10.p1k chr16 128 842 1795 1794 F 715 0.00 1356 reject_low 52 ALIGNMENT 0 YS2-20l10.p1k chr02 128 842 1618 1617 F 715 0.00 1356 reject_low 131 ALIGNMENT 0 YS2-20l10.p1k chr08 138 842 1685 1684 F 705 0.00 1356 reject_low 186 ALIGNMENT 70 YS2-20l10.p1k chr16 42 127 1710 1795 F 86 94.19 1356 reject_low 52 ALIGNMENT 1026 YS2-20l10.q1k chr12 1198 49 7961 9103 C 1150 96.78 1284 ambiguous_tel 1 ALIGNMENT 0 YS2-20l10.p1k chr02 62 77 2037 2036 F 16 0.00 1356 reject_low 155 ALIGNMENT 49 YS2-20l10.p1k chr12 127 33 1069786 1069880 C 95 84.21 1356 reject_low 84 ALIGNMENT 70 YS2-20l10.p1k chr07 127 42 1089082 1089167 C 86 94.19 1356 reject_low 47 ALIGNMENT 51 YS2-20l10.p1k chr02 45 129 1932 2016 F 85 87.06 1356 reject_low 107 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1069679 1069678 C 715 0.00 1356 reject_low 157 ALIGNMENT 73 YS2-20l10.p1k chr02 42 137 1821 1916 F 96 92.71 1356 reject_low 37 ALIGNMENT 84 YS2-20l10.p1k chr05 34 137 1833 1936 F 104 94.23 1356|0,3 reject_low 17 ALIGNMENT 0 YS2-20l10.p1k chr13 128 842 1763 1762 F 715 0.00 1356 reject_low 118 ALIGNMENT 0 YS2-20l10.p1k chr02 128 842 2194 2193 F 715 0.00 1356 reject_low 33 ALIGNMENT 1032 YS2-20l10.q1k chr06 1198 49 1463 2605 C 1150 96.96 1284 reject_low 18 ALIGNMENT 46 YS2-20l10.p1k chr08 127 42 560529 560614 C 86 84.88 1356 reject_low 125 ALIGNMENT 81 YS2-20l10.p1k chr05 137 34 575031 575134 C 104 93.27 1356 reject_low 21 ALIGNMENT 0 YS2-20l10.p1k chr14 138 842 1860 1859 F 705 0.00 1356 reject_low 27 ALIGNMENT 43 YS2-20l10.p1k chr16 42 127 1530 1615 F 86 83.72 1356 reject_low 151 ALIGNMENT 51 YS2-20l10.p1k chr12 34 127 1758 1851 F 94 85.11 1356 reject_low 103 ALIGNMENT 43 YS2-20l10.p1k chr08 127 42 560709 560794 C 86 83.72 1356 reject_low 140 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1069931 1069930 C 715 0.00 1356 reject_low 116 ALIGNMENT 45 YS2-20l10.p1k chr16 34 127 1486 1579 F 94 82.98 1356 reject_low 121 ALIGNMENT 0 YS2-20l10.p1k chr07 842 128 1089047 1089046 C 715 0.00 1356 reject_low 138 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1076594 1076593 C 715 0.00 1356 reject_low 117 ALIGNMENT 0 YS2-20l10.p1k chr05 128 842 1674 1673 F 715 0.00 1356 reject_low 171 ALIGNMENT 0 YS2-20l10.p1k chr04 842 128 1530393 1530392 C 715 0.00 1356 reject_low 112 ALIGNMENT 49 YS2-20l10.p1k chr04 127 33 1530248 1530342 C 95 84.21 1356 reject_low 74 ALIGNMENT 43 YS2-20l10.p1k chr16 42 127 1746 1831 F 86 83.72 1356 reject_low 152 ALIGNMENT 0 YS2-20l10.p1k chr16 128 842 1723 1722 F 715 0.00 1356 reject_low 95 ALIGNMENT 81 YS2-20l10.p1k chr16 137 34 946100 946203 C 104 93.27 1356 reject_low 30 ALIGNMENT 45 YS2-20l10.p1k chr16 129 42 946360 946447 C 88 84.09 1356 reject_low 128 ALIGNMENT 1023 YS2-20l10.q1k chr15 49 1198 1087876 1089018 F 1150 96.70 1284 ambiguous_tel 9 ALIGNMENT 0 YS2-20l10.p1k chr16 128 842 1831 1830 F 715 0.00 1356 reject_low 152 ALIGNMENT 67 YS2-20l10.p1k chr15 127 42 1089341 1089426 C 86 93.02 1356 reject_low 59 ALIGNMENT 45 YS2-20l10.p1k chr04 127 34 1530392 1530485 C 94 82.98 1356 reject_low 112 ALIGNMENT 1023 YS2-20l10.q1k chr04 49 1198 1528711 1529853 F 1150 96.70 1284 ambiguous_tel 6 ALIGNMENT 958 YS2-20l10.p1k chr16 42 1242 1818 3025 F 1201 94.59 1356 ambiguous_tel 5 ALIGNMENT 81 YS2-20l10.p1k chr12 137 34 1076403 1076506 C 104 93.27 1356 reject_low 19 ALIGNMENT 0 YS2-20l10.p1k chr12 138 842 7360 7359 F 705 0.00 1356 reject_low 189 ALIGNMENT 46 YS2-20l10.p1k chr02 42 137 2073 2168 F 96 83.33 1356 reject_low 109 ALIGNMENT 25 YS2-20l10.p1k chr04 137 102 1530454 1530489 C 36 91.67 1356 reject_low 184 ALIGNMENT 938 YS2-20l10.p1k chr10 131 1242 2357 3487 F 1112 95.77 1356|9,0 reject_low 16 ALIGNMENT 0 YS2-20l10.p1k chr02 138 842 1916 1915 F 705 0.00 1356 reject_low 37 ALIGNMENT 49 YS2-20l10.p1k chr07 127 33 1089190 1089284 C 95 84.21 1356 reject_low 79 ALIGNMENT 70 YS2-20l10.p1k chr05 36 127 1763 1854 F 92 92.39 1356 reject_low 43 ALIGNMENT 0 YS2-20l10.p1k chr13 62 101 1666 1665 F 40 0.00 1356 reject_low 192 ALIGNMENT 70 YS2-20l10.p1k chr13 42 127 1894 1979 F 86 94.19 1356 reject_low 50 ALIGNMENT 34 YS2-20l10.p1k chr04 127 42 1530320 1530405 C 86 80.23 1356 reject_low 169 ALIGNMENT 1026 YS2-20l10.q1k chr16 49 1198 944609 945751 F 1150 96.78 1284 ambiguous_tel 2 ALIGNMENT 60 YS2-20l10.p1k chr16 137 34 946388 946491 C 104 86.54 1356 reject_low 45 ALIGNMENT 0 YS2-20l10.p1k chr08 128 842 1855 1854 F 715 0.00 1356 reject_low 42 ALIGNMENT 0 YS2-20l10.p1k chr05 128 842 1854 1853 F 715 0.00 1356 reject_low 43 ALIGNMENT 45 YS2-20l10.p1k chr08 127 34 560745 560838 C 94 82.98 1356 reject_low 114 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1069895 1069894 C 715 0.00 1356 reject_low 144 ALIGNMENT 34 YS2-20l10.p1k chr12 127 42 1069858 1069943 C 86 80.23 1356 reject_low 176 ALIGNMENT 0 YS2-20l10.p1k chr15 842 138 1089368 1089367 C 705 0.00 1356 reject_low 28 ALIGNMENT 0 YS2-20l10.p1k chr12 138 842 1717 1716 F 705 0.00 1356 reject_low 188 ALIGNMENT 34 YS2-20l10.p1k chr10 35 111 2285 2361 F 77 81.82 1356 reject_low 165 ALIGNMENT 49 YS2-20l10.p1k chr05 127 33 575113 575207 C 95 84.21 1356 reject_low 77 ALIGNMENT 859 YS2-20l10.p1k chr06 131 1242 1257 2370 F 1112 93.97 1356|4,0 reject_low 18 ALIGNMENT 0 YS2-20l10.p1k chr15 842 128 1089450 1089449 C 715 0.00 1356 reject_low 93 ALIGNMENT 0 YS2-20l10.p1k chr05 842 128 575006 575005 C 715 0.00 1356 reject_low 46 ALIGNMENT 51 YS2-20l10.p1k chr16 127 34 946326 946419 C 94 85.11 1356 reject_low 105 ALIGNMENT 52 YS2-20l10.p1k chr12 33 127 1901 1995 F 95 85.26 1356 reject_low 65 ALIGNMENT 0 YS2-20l10.p1k chr02 128 842 1654 1653 F 715 0.00 1356 reject_low 132 ALIGNMENT 0 YS2-20l10.p1k chr02 130 842 2268 2267 F 713 0.00 1356 reject_low 35 ALIGNMENT 0 YS2-20l10.p1k chr12 842 138 1076404 1076403 C 705 0.00 1356 reject_low 19 ALIGNMENT 43 YS2-20l10.p1k chr05 127 42 574969 575054 C 86 83.72 1356 reject_low 135 ALIGNMENT 81 YS2-20l10.p1k chr13 34 137 1850 1953 F 104 93.27 1356 reject_low 26 ALIGNMENT 0 YS2-20l10.p1k chr08 842 128 560638 560637 C 715 0.00 1356 reject_low 80 ALIGNMENT 79 YS2-20l10.p1k chr02 36 127 1779 1870 F 92 95.65 1356 reject_low 34 ALIGNMENT 49 YS2-20l10.p1k chr12 33 127 1937 2031 F 95 84.21 1356 reject_low 81 ALIGNMENT 51 YS2-20l10.p1k chr09 34 137 1689 1792 F 104 83.65 1356 reject_low 66 ALIGNMENT 941 YS2-20l10.p1k chr09 131 1242 2374 3504 F 1112 95.86 1356|4,0 reject_low 15 ALIGNMENT 49 YS2-20l10.p1k chr12 33 127 7472 7566 F 95 84.21 1356 reject_low 83 ALIGNMENT 0 YS2-20l10.p1k chr05 128 842 1782 1781 F 715 0.00 1356 reject_low 129 ALIGNMENT 40 YS2-20l10.p1k chr12 127 42 1076341 1076426 C 86 82.56 1356 reject_low 158 ALIGNMENT 40 YS2-20l10.p1k chr16 127 42 946218 946303 C 86 82.56 1356 reject_low 160 ALIGNMENT 0 YS2-20l10.p1k chr16 842 128 946075 946074 C 715 0.00 1356 reject_low 53 ALIGNMENT 43 YS2-20l10.p1k chr15 127 42 1089521 1089606 C 86 83.72 1356 reject_low 150 ALIGNMENT 81 YS2-20l10.p1k chr12 34 137 7509 7612 F 104 93.27 1356 reject_low 24 ALIGNMENT 49 YS2-20l10.p1k chr16 33 127 1629 1723 F 95 84.21 1356 reject_low 95 ALIGNMENT 0 YS2-20l10.p1k chr08 842 138 560592 560591 C 705 0.00 1356 reject_low 61 ALIGNMENT 0 YS2-20l10.p1k chr09 138 842 2116 2115 F 705 0.00 1356 reject_low 98 ALIGNMENT 0 YS2-20l10.p1k chr14 128 842 1886 1885 F 715 0.00 1356 reject_low 51 ALIGNMENT 60 YS2-20l10.p1k chr12 34 137 1686 1789 F 104 86.54 1356 reject_low 44 ALIGNMENT 43 YS2-20l10.p1k chr02 42 127 1533 1618 F 86 83.72 1356 reject_low 131 ALIGNMENT 944 YS2-20l10.p1k chr02 42 1242 2325 3534 F 1201 94.25 1356 ambiguous_tel 12 ALIGNMENT 29 YS2-20l10.p1k chr09 78 122 1697 1741 F 45 88.89 1356 reject_low 197 ALIGNMENT 0 YS2-20l10.p1k chr13 128 842 1907 1906 F 715 0.00 1356 reject_low 89 ALIGNMENT 81 YS2-20l10.p1k chr15 137 34 1089367 1089470 C 104 93.27 1356 reject_low 28 ALIGNMENT 55 YS2-20l10.p1k chr09 34 129 1761 1856 F 96 86.46 1356 reject_low 70 ALIGNMENT 43 YS2-20l10.p1k chr05 42 137 1661 1756 F 96 82.29 1356 reject_low 122 ALIGNMENT 0 YS2-20l10.p1k chr06 128 842 1025 1024 F 715 0.00 1356 reject_low 62 ALIGNMENT 51 YS2-20l10.p1k chr09 34 137 1725 1828 F 104 83.65 1356 reject_low 67 ALIGNMENT 955 YS2-20l10.p1k chr04 1242 42 1528946 1530153 C 1201 94.50 1356 ambiguous_tel 6 ALIGNMENT 1023 YS2-20l10.q1k chr16 1198 49 2118 3260 C 1150 96.70 1284 ambiguous_tel 5 ALIGNMENT 0 YS2-20l10.p1k chr05 842 128 575150 575149 C 715 0.00 1356 reject_low 172 ALIGNMENT 34 YS2-20l10.p1k chr12 42 127 7409 7494 F 86 80.23 1356 reject_low 175 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1069787 1069786 C 715 0.00 1356 reject_low 84 ALIGNMENT 43 YS2-20l10.p1k chr12 42 127 7373 7458 F 86 83.72 1356 reject_low 142 ALIGNMENT 0 YS2-20l10.p1k chr16 842 128 946255 946254 C 715 0.00 1356 reject_low 38 ALIGNMENT 1023 YS2-20l10.q1k chr07 49 1198 1087617 1088759 F 1150 96.70 1284 ambiguous_tel 3 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 1851 1850 F 715 0.00 1356 reject_low 103 ALIGNMENT 43 YS2-20l10.p1k chr05 127 42 575185 575270 C 86 83.72 1356 reject_low 136 ALIGNMENT 0 YS2-20l10.p1k chr08 128 842 1819 1818 F 715 0.00 1356 reject_low 100 ALIGNMENT 0 YS2-20l10.p1k chr02 128 842 2122 2121 F 715 0.00 1356 reject_low 32 ALIGNMENT 43 YS2-20l10.p1k chr07 127 42 1089262 1089347 C 86 83.72 1356 reject_low 139 ALIGNMENT 81 YS2-20l10.p1k chr12 34 137 1974 2077 F 104 93.27 1356 reject_low 23 ALIGNMENT 46 YS2-20l10.p1k chr08 42 127 1698 1783 F 86 84.88 1356 reject_low 124 ALIGNMENT 0 YS2-20l10.p1k chr05 112 842 2054 2053 F 731 0.00 1356 reject_low 162 ALIGNMENT 49 YS2-20l10.p1k chr08 127 33 560637 560731 C 95 84.21 1356 reject_low 80 ALIGNMENT 37 YS2-20l10.p1k chr05 57 127 1496 1566 F 71 84.51 1356 reject_low 168 ALIGNMENT 1029 YS2-20l10.q1k chr05 1198 49 2273 3415 C 1150 96.87 1284 reject_low 17 ALIGNMENT 39 YS2-20l10.p1k chr02 42 129 1677 1764 F 88 81.82 1356 reject_low 161 ALIGNMENT 52 YS2-20l10.p1k chr09 34 129 1797 1892 F 96 85.42 1356 reject_low 97 ALIGNMENT 0 YS2-20l10.p1k chr12 842 138 1069741 1069740 C 705 0.00 1356 reject_low 25 ALIGNMENT 49 YS2-20l10.p1k chr12 127 33 1069822 1069916 C 95 84.21 1356 reject_low 85 ALIGNMENT 0 YS2-20l10.p1k chr13 128 842 1979 1978 F 715 0.00 1356 reject_low 50 ALIGNMENT 0 YS2-20l10.p1k chr12 62 101 7325 7324 F 40 0.00 1356 reject_low 189 ALIGNMENT 45 YS2-20l10.p1k chr12 127 34 1076593 1076686 C 94 82.98 1356 reject_low 117 ALIGNMENT 944 YS2-20l10.p1k chr08 42 1242 1842 3065 F 1201 93.84 1356 ambiguous_tel 14 ALIGNMENT 34 YS2-20l10.p1k chr09 35 111 2302 2378 F 77 81.82 1356 reject_low 164 ALIGNMENT 49 YS2-20l10.p1k chr12 127 33 1076485 1076579 C 95 84.21 1356 reject_low 87 ALIGNMENT 76 YS2-20l10.p1k chr08 129 34 560563 560658 C 96 93.75 1356 reject_low 36 ALIGNMENT 81 YS2-20l10.p1k chr16 34 137 1666 1769 F 104 93.27 1356 reject_low 29 ALIGNMENT 0 YS2-20l10.p1k chr09 138 842 2080 2079 F 705 0.00 1356 reject_low 31 ALIGNMENT 0 YS2-20l10.p1k chr14 128 842 1742 1741 F 715 0.00 1356 reject_low 179 ALIGNMENT 45 YS2-20l10.p1k chr02 34 127 1489 1582 F 94 82.98 1356 reject_low 111 ALIGNMENT 67 YS2-20l10.p1k chr12 127 42 1076377 1076462 C 86 93.02 1356 reject_low 58 ALIGNMENT 0 YS2-20l10.p1k chr09 130 842 1892 1891 F 713 0.00 1356 reject_low 97 ALIGNMENT 1021 YS2-20l10.q1k chr08 49 1198 559062 560206 F 1150 96.70 1284 ambiguous_tel 13 ALIGNMENT 0 YS2-20l10.p1k chr09 128 842 2178 2177 F 715 0.00 1356 reject_low 102 ALIGNMENT 43 YS2-20l10.p1k chr07 127 42 1089046 1089131 C 86 83.72 1356 reject_low 138 ALIGNMENT 958 YS2-20l10.p1k chr07 1242 42 1087852 1089059 C 1201 94.59 1356 ambiguous_tel 3 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 2139 2138 F 715 0.00 1356 reject_low 141 ALIGNMENT 0 YS2-20l10.p1k chr15 842 128 1089306 1089305 C 715 0.00 1356 reject_low 159 ALIGNMENT 0 YS2-20l10.p1k chr08 101 62 560843 560842 C 40 0.00 1356 reject_low 187 ALIGNMENT 0 YS2-20l10.p1k chr09 128 842 2142 2141 F 715 0.00 1356 reject_low 108 ALIGNMENT 0 YS2-20l10.p1k chr14 128 842 1922 1921 F 715 0.00 1356 reject_low 149 ALIGNMENT 0 YS2-20l10.p1k chr12 138 842 2077 2076 F 705 0.00 1356 reject_low 23 ALIGNMENT 26 YS2-20l10.p1k chr16 127 78 946434 946483 C 50 84.00 1356 reject_low 199 ALIGNMENT 0 YS2-20l10.p1k chr09 130 842 1856 1855 F 713 0.00 1356 reject_low 70 ALIGNMENT 78 YS2-20l10.p1k chr02 34 127 2029 2122 F 94 94.68 1356 reject_low 32 ALIGNMENT 0 YS2-20l10.p1k chr05 842 128 574970 574969 C 715 0.00 1356 reject_low 135 ALIGNMENT 0 YS2-20l10.p1k chr07 842 138 1089109 1089108 C 705 0.00 1356 reject_low 22 ALIGNMENT 0 YS2-20l10.p1k chr13 128 842 1835 1834 F 715 0.00 1356 reject_low 178 ALIGNMENT 51 YS2-20l10.p1k chr12 34 137 1794 1897 F 104 83.65 1356 reject_low 68 ALIGNMENT 0 YS2-20l10.p1k chr08 62 77 1662 1661 F 16 0.00 1356 reject_low 182 ALIGNMENT 54 YS2-20l10.p1k chr05 34 127 1545 1638 F 94 86.17 1356 reject_low 73 ALIGNMENT 70 YS2-20l10.p1k chr12 42 127 2018 2103 F 86 94.19 1356 reject_low 48 ALIGNMENT 43 YS2-20l10.p1k chr05 42 127 1805 1890 F 86 83.72 1356 reject_low 134 ALIGNMENT 0 YS2-20l10.p1k chr12 130 842 1817 1816 F 713 0.00 1356 reject_low 127 ALIGNMENT 955 YS2-20l10.p1k chr12 1242 42 1068484 1069691 C 1201 94.50 1356 ambiguous_tel 7 ALIGNMENT 42 YS2-20l10.p1k chr05 34 127 1689 1782 F 94 81.91 1356 reject_low 129 ALIGNMENT 0 YS2-20l10.p1k chr05 842 128 575078 575077 C 715 0.00 1356 reject_low 76 ALIGNMENT 0 YS2-20l10.p1k chr15 842 128 1089342 1089341 C 715 0.00 1356 reject_low 59 ALIGNMENT 0 YS2-20l10.p1k chr09 138 842 1792 1791 F 705 0.00 1356 reject_low 66 ALIGNMENT 25 YS2-20l10.p1k chr16 102 137 1482 1517 F 36 91.67 1356 reject_low 195 ALIGNMENT 0 YS2-20l10.p1k chr06 128 842 953 952 F 715 0.00 1356 reject_low 154 ALIGNMENT 0 YS2-20l10.p1k chr08 842 138 560808 560807 C 705 0.00 1356 reject_low 187 ALIGNMENT 0 YS2-20l10.p1k chr16 128 842 1651 1650 F 715 0.00 1356 reject_low 181 ALIGNMENT 35 YS2-20l10.p1k chr02 78 137 2037 2096 F 60 86.67 1356 reject_low 155 ALIGNMENT 40 YS2-20l10.p1k chr15 127 42 1089305 1089390 C 86 82.56 1356 reject_low 159 ALIGNMENT 0 YS2-20l10.p1k chr02 62 101 1485 1484 F 40 0.00 1356 reject_low 183 ALIGNMENT 0 YS2-20l10.p1k chr08 128 842 1783 1782 F 715 0.00 1356 reject_low 124 ALIGNMENT 34 YS2-20l10.p1k chr05 35 111 1978 2054 F 77 81.82 1356 reject_low 162 ALIGNMENT 45 YS2-20l10.p1k chr14 34 127 1577 1670 F 94 82.98 1356 reject_low 119 ALIGNMENT 0 YS2-20l10.p1k chr05 128 842 1566 1565 F 715 0.00 1356 reject_low 168 ALIGNMENT 0 YS2-20l10.p1k chr16 842 128 946147 946146 C 715 0.00 1356 reject_low 96 ALIGNMENT 40 YS2-20l10.p1k chr12 127 42 1069678 1069763 C 86 82.56 1356 reject_low 157 ALIGNMENT 25 YS2-20l10.p1k chr02 102 137 1485 1520 F 36 91.67 1356 reject_low 183 ALIGNMENT 49 YS2-20l10.p1k chr04 127 33 1530284 1530378 C 95 84.21 1356 reject_low 75 ALIGNMENT 25 YS2-20l10.p1k chr13 102 137 1666 1701 F 36 91.67 1356 reject_low 192 ALIGNMENT 46 YS2-20l10.p1k chr02 42 127 2217 2302 F 86 84.88 1356 reject_low 123 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1069859 1069858 C 715 0.00 1356 reject_low 176 ALIGNMENT 0 YS2-20l10.p1k chr10 140 139 2246 2365 F 0 0.00 1356 reject_low 16 ALIGNMENT 0 YS2-20l10.p1k chr06 128 842 1061 1060 F 715 0.00 1356 reject_low 137 ALIGNMENT 0 YS2-20l10.p1k chr14 128 842 1706 1705 F 715 0.00 1356 reject_low 148 ALIGNMENT 0 YS2-20l10.p1k chr02 130 842 2016 2015 F 713 0.00 1356 reject_low 107 ALIGNMENT 43 YS2-20l10.p1k chr14 42 127 1837 1922 F 86 83.72 1356 reject_low 149 ALIGNMENT 0 YS2-20l10.p1k chr08 842 130 560564 560563 C 713 0.00 1356 reject_low 36 ALIGNMENT 0 YS2-20l10.p1k chr16 842 138 946461 946460 C 705 0.00 1356 reject_low 196 ALIGNMENT 49 YS2-20l10.p1k chr14 33 127 1684 1778 F 95 84.21 1356 reject_low 90 ALIGNMENT 34 YS2-20l10.p1k chr07 127 42 1089226 1089311 C 86 80.23 1356 reject_low 173 ALIGNMENT 0 YS2-20l10.p1k chr02 128 842 1798 1797 F 715 0.00 1356 reject_low 106 ALIGNMENT 49 YS2-20l10.p1k chr05 127 33 575077 575171 C 95 84.21 1356 reject_low 76 ALIGNMENT 0 YS2-20l10.p1k chr09 128 842 1710 1709 F 715 0.00 1356 reject_low 201 ALIGNMENT 0 YS2-20l10.p1k chr09 62 101 1685 1684 F 40 0.00 1356 reject_low 201 ALIGNMENT 52 YS2-20l10.p1k chr08 137 33 560591 560695 C 105 83.81 1356 reject_low 61 ALIGNMENT 54 YS2-20l10.p1k chr09 34 137 1869 1972 F 104 84.62 1356 reject_low 63 ALIGNMENT 0 YS2-20l10.p1k chr09 138 842 1972 1971 F 705 0.00 1356 reject_low 63 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1069715 1069714 C 715 0.00 1356 reject_low 57 ALIGNMENT 45 YS2-20l10.p1k chr12 42 129 1730 1817 F 88 84.09 1356 reject_low 127 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1076450 1076449 C 715 0.00 1356 reject_low 86 ALIGNMENT 0 YS2-20l10.p1k chr05 135 134 1934 2053 F 0 0.00 1356 reject_low 17 ALIGNMENT 0 YS2-20l10.p1k chr16 128 842 1687 1686 F 715 0.00 1356 reject_low 94 ALIGNMENT 0 YS2-20l10.p1k chr08 842 128 560494 560493 C 715 0.00 1356 reject_low 101 ALIGNMENT 37 YS2-20l10.p1k chr02 42 127 1965 2050 F 86 81.40 1356 reject_low 166 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 7494 7493 F 715 0.00 1356 reject_low 175 ALIGNMENT 42 YS2-20l10.p1k chr10 60 147 2166 2253 F 88 82.95 1356|0,8 reject_low 16 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1069823 1069822 C 715 0.00 1356 reject_low 85 ALIGNMENT 0 YS2-20l10.p1k chr06 138 842 999 998 F 705 0.00 1356 reject_low 39 ALIGNMENT 0 YS2-20l10.p1k chr04 842 128 1530141 1530140 C 715 0.00 1356 reject_low 156 ALIGNMENT 34 YS2-20l10.p1k chr13 42 127 1750 1835 F 86 80.23 1356 reject_low 178 ALIGNMENT 78 YS2-20l10.p1k chr02 34 127 2101 2194 F 94 94.68 1356 reject_low 33 ALIGNMENT 45 YS2-20l10.p1k chr13 34 127 1670 1763 F 94 82.98 1356 reject_low 118 ALIGNMENT 43 YS2-20l10.p1k chr13 42 127 1714 1799 F 86 83.72 1356 reject_low 146 ALIGNMENT 0 YS2-20l10.p1k chr16 842 138 946389 946388 C 705 0.00 1356 reject_low 45 ALIGNMENT 49 YS2-20l10.p1k chr15 127 33 1089413 1089507 C 95 84.21 1356 reject_low 92 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 1743 1742 F 715 0.00 1356 reject_low 198 ALIGNMENT 0 YS2-20l10.p1k chr05 842 128 575186 575185 C 715 0.00 1356 reject_low 136 ALIGNMENT 0 YS2-20l10.p1k chr04 101 62 1530490 1530489 C 40 0.00 1356 reject_low 184 ALIGNMENT 0 YS2-20l10.p1k chr02 128 842 1582 1581 F 715 0.00 1356 reject_low 111 ALIGNMENT 955 YS2-20l10.p1k chr15 1242 42 1088111 1089318 C 1201 94.50 1356 ambiguous_tel 9 ALIGNMENT 48 YS2-20l10.p1k chr09 34 127 2049 2142 F 94 84.04 1356 reject_low 108 ALIGNMENT 0 YS2-20l10.p1k chr08 842 128 560674 560673 C 715 0.00 1356 reject_low 174 ALIGNMENT 0 YS2-20l10.p1k chr16 842 128 946219 946218 C 715 0.00 1356 reject_low 160 ALIGNMENT 34 YS2-20l10.p1k chr05 42 127 1517 1602 F 86 80.23 1356 reject_low 170 ALIGNMENT 70 YS2-20l10.p1k chr14 42 127 1801 1886 F 86 94.19 1356 reject_low 51 ALIGNMENT 0 YS2-20l10.p1k chr02 130 842 1764 1763 F 713 0.00 1356 reject_low 161 ALIGNMENT 43 YS2-20l10.p1k chr06 66 127 892 953 F 62 90.32 1356 reject_low 154 ALIGNMENT 0 YS2-20l10.p1k chr05 101 62 575319 575318 C 40 0.00 1356 reject_low 185 ALIGNMENT 0 YS2-20l10.p1k chr05 138 842 1828 1827 F 705 0.00 1356 reject_low 55 ALIGNMENT 0 YS2-20l10.p1k chr09 123 842 1741 1740 F 720 0.00 1356 reject_low 197 ALIGNMENT 944 YS2-20l10.p1k chr08 1242 42 559297 560506 C 1201 94.25 1356 ambiguous_tel 13 ALIGNMENT 1020 YS2-20l10.q1k chr13 1198 49 2302 3444 C 1150 96.61 1284 ambiguous_tel 10 ALIGNMENT 49 YS2-20l10.p1k chr07 127 33 1089154 1089248 C 95 84.21 1356 reject_low 78 ALIGNMENT 61 YS2-20l10.p1k chr08 34 129 1654 1749 F 96 88.54 1356 reject_low 60 ALIGNMENT 958 YS2-20l10.p1k chr14 42 1242 1909 3116 F 1201 94.59 1356 ambiguous_tel 4 ALIGNMENT 0 YS2-20l10.p1k chr07 842 128 1089227 1089226 C 715 0.00 1356 reject_low 173 ALIGNMENT 51 YS2-20l10.p1k chr09 34 127 2085 2178 F 94 85.11 1356 reject_low 102 ALIGNMENT 49 YS2-20l10.p1k chr09 42 137 2021 2116 F 96 84.38 1356 reject_low 98 ALIGNMENT 25 YS2-20l10.p1k chr05 137 102 575283 575318 C 36 91.67 1356 reject_low 185 ALIGNMENT 0 YS2-20l10.p1k chr02 138 842 2240 2239 F 705 0.00 1356 reject_low 110 ALIGNMENT 0 YS2-20l10.p1k chr12 138 842 7612 7611 F 705 0.00 1356 reject_low 24 ALIGNMENT 1023 YS2-20l10.q1k chr14 1198 49 2209 3351 C 1150 96.70 1284 ambiguous_tel 4 ALIGNMENT 75 YS2-20l10.p1k chr16 127 34 946254 946347 C 94 93.62 1356 reject_low 38 ALIGNMENT 25 YS2-20l10.p1k chr15 137 102 1089619 1089654 C 36 91.67 1356 reject_low 194 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1076522 1076521 C 715 0.00 1356 reject_low 177 ALIGNMENT 0 YS2-20l10.p1k chr04 842 128 1530357 1530356 C 715 0.00 1356 reject_low 133 ALIGNMENT 0 YS2-20l10.p1k chr08 842 128 560710 560709 C 715 0.00 1356 reject_low 140 ALIGNMENT 0 YS2-20l10.p1k chr02 128 842 2302 2301 F 715 0.00 1356 reject_low 123 ALIGNMENT 0 YS2-20l10.p1k chr07 842 128 1089191 1089190 C 715 0.00 1356 reject_low 79 ALIGNMENT 0 YS2-20l10.p1k chr08 62 101 1650 1649 F 40 0.00 1356 reject_low 186 ALIGNMENT 70 YS2-20l10.p1k chr06 42 137 904 999 F 96 91.67 1356 reject_low 39 ALIGNMENT 46 YS2-20l10.p1k chr02 42 137 2145 2240 F 96 83.33 1356 reject_low 110 ALIGNMENT 0 YS2-20l10.p1k chr04 842 128 1530285 1530284 C 715 0.00 1356 reject_low 75 ALIGNMENT 46 YS2-20l10.p1k chr09 42 127 1949 2034 F 86 84.88 1356 reject_low 126 ALIGNMENT 0 YS2-20l10.p1k chr02 128 842 1870 1869 F 715 0.00 1356 reject_low 34 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1076378 1076377 C 715 0.00 1356 reject_low 58 ALIGNMENT 34 YS2-20l10.p1k chr08 127 42 560673 560758 C 86 80.23 1356 reject_low 174 ALIGNMENT 67 YS2-20l10.p1k chr12 127 42 1069714 1069799 C 86 93.02 1356 reject_low 57 ALIGNMENT 34 YS2-20l10.p1k chr16 42 127 1566 1651 F 86 80.23 1356 reject_low 181 ALIGNMENT 45 YS2-20l10.p1k chr15 127 34 1089557 1089650 C 94 82.98 1356 reject_low 120 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1076486 1076485 C 715 0.00 1356 reject_low 87 ALIGNMENT 25 YS2-20l10.p1k chr12 102 137 1682 1717 F 36 91.67 1356 reject_low 188 ALIGNMENT 0 YS2-20l10.p1k chr14 138 842 1608 1607 F 705 0.00 1356 reject_low 193 ALIGNMENT 0 YS2-20l10.p1k chr08 842 128 560746 560745 C 715 0.00 1356 reject_low 114 ALIGNMENT 64 YS2-20l10.p1k chr06 42 127 940 1025 F 86 91.86 1356 reject_low 62 ALIGNMENT 25 YS2-20l10.p1k chr08 102 137 1650 1685 F 36 91.67 1356 reject_low 186 ALIGNMENT 45 YS2-20l10.p1k chr05 127 34 575221 575314 C 94 82.98 1356 reject_low 113 ALIGNMENT 43 YS2-20l10.p1k chr12 127 42 1076557 1076642 C 86 83.72 1356 reject_low 145 ALIGNMENT 25 YS2-20l10.p1k chr14 102 137 1573 1608 F 36 91.67 1356 reject_low 193 ALIGNMENT 0 YS2-20l10.p1k chr16 842 130 946361 946360 C 713 0.00 1356 reject_low 128 ALIGNMENT 0 YS2-20l10.p1k chr16 101 62 946496 946495 C 40 0.00 1356 reject_low 196 ALIGNMENT 46 YS2-20l10.p1k chr02 33 127 1704 1798 F 95 83.16 1356 reject_low 106 ALIGNMENT 0 YS2-20l10.p1k chr04 842 128 1530177 1530176 C 715 0.00 1356 reject_low 56 ALIGNMENT 81 YS2-20l10.p1k chr12 137 34 1069740 1069843 C 104 93.27 1356 reject_low 25 ALIGNMENT 955 YS2-20l10.p1k chr12 1242 42 1075147 1076354 C 1201 94.50 1356 ambiguous_tel 8 ALIGNMENT 0 YS2-20l10.p1k chr02 128 842 2338 2337 F 715 0.00 1356 reject_low 99 ALIGNMENT 25 YS2-20l10.p1k chr12 137 102 1069992 1070027 C 36 91.67 1356 reject_low 190 ALIGNMENT 0 YS2-20l10.p1k chr16 842 128 946039 946038 C 715 0.00 1356 reject_low 153 ALIGNMENT 0 YS2-20l10.p1k chr15 842 128 1089486 1089485 C 715 0.00 1356 reject_low 180 ALIGNMENT 0 YS2-20l10.p1k chr09 135 134 2222 2377 F 0 0.00 1356 reject_low 15 ALIGNMENT 0 YS2-20l10.p1k chr02 128 842 2050 2049 F 715 0.00 1356 reject_low 166 ALIGNMENT 0 YS2-20l10.p1k chr14 128 842 1670 1669 F 715 0.00 1356 reject_low 119 ALIGNMENT 51 YS2-20l10.p1k chr16 127 34 946182 946275 C 94 85.11 1356 reject_low 104 ALIGNMENT 34 YS2-20l10.p1k chr15 127 42 1089485 1089570 C 86 80.23 1356 reject_low 180 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1076342 1076341 C 715 0.00 1356 reject_low 158 ALIGNMENT 1023 YS2-20l10.q1k chr05 49 1198 573540 574682 F 1150 96.70 1284 ambiguous_tel 11 ALIGNMENT 0 YS2-20l10.p1k chr12 138 842 1897 1896 F 705 0.00 1356 reject_low 68 ALIGNMENT 0 YS2-20l10.p1k chr15 842 128 1089522 1089521 C 715 0.00 1356 reject_low 150 ALIGNMENT 926 YS2-20l10.p1k chr05 131 1242 2050 3180 F 1112 95.41 1356|4,0 reject_low 17 ALIGNMENT 955 YS2-20l10.p1k chr12 42 1242 2126 3333 F 1201 94.50 1356 ambiguous_tel 0 ALIGNMENT 0 YS2-20l10.p1k chr09 128 842 2034 2033 F 715 0.00 1356 reject_low 126 ALIGNMENT 81 YS2-20l10.p1k chr04 137 34 1530202 1530305 C 104 93.27 1356 reject_low 20 ALIGNMENT 0 YS2-20l10.p1k chr12 842 128 1076558 1076557 C 715 0.00 1356 reject_low 145 ALIGNMENT 1023 YS2-20l10.q1k chr12 49 1198 1068249 1069391 F 1150 96.70 1284 ambiguous_tel 7,8 ALIGNMENT 0 YS2-20l10.p1k chr16 138 842 1769 1768 F 705 0.00 1356 reject_low 29 ALIGNMENT 43 YS2-20l10.p1k chr13 42 127 1930 2015 F 86 83.72 1356 reject_low 147 ALIGNMENT 955 YS2-20l10.p1k chr12 42 1242 7661 8868 F 1201 94.50 1356 ambiguous_tel 1 ALIGNMENT 1041 YS2-20l10.q1k chr09 1198 49 2597 3739 C 1150 97.22 1284 reject_low 15 ALIGNMENT 0 YS2-20l10.p1k chr07 842 128 1089155 1089154 C 715 0.00 1356 reject_low 78 ALIGNMENT 0 YS2-20l10.p1k chr04 842 128 1530249 1530248 C 715 0.00 1356 reject_low 74 ALIGNMENT 0 YS2-20l10.p1k chr07 842 128 1089083 1089082 C 715 0.00 1356 reject_low 47 ALIGNMENT 0 YS2-20l10.p1k chr08 130 842 1749 1748 F 713 0.00 1356 reject_low 60 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 1923 1922 F 715 0.00 1356 reject_low 40 ALIGNMENT 0 YS2-20l10.p1k chr13 128 842 1871 1870 F 715 0.00 1356 reject_low 88 ALIGNMENT 0 YS2-20l10.p1k chr15 101 62 1089655 1089654 C 40 0.00 1356 reject_low 194 ALIGNMENT 51 YS2-20l10.p1k chr16 137 34 946280 946383 C 104 83.65 1356 reject_low 69 ALIGNMENT 1041 YS2-20l10.q1k chr10 1198 49 2580 3722 C 1150 97.22 1284 reject_low 16 ALIGNMENT 0 YS2-20l10.p1k chr08 138 842 1721 1720 F 705 0.00 1356 reject_low 182 ALIGNMENT 49 YS2-20l10.p1k chr14 33 127 1720 1814 F 95 84.21 1356 reject_low 91 ALIGNMENT 0 YS2-20l10.p1k chr12 138 842 1789 1788 F 705 0.00 1356 reject_low 44 ALIGNMENT 29 YS2-20l10.p1k chr08 78 137 1662 1721 F 60 83.33 1356 reject_low 182 ALIGNMENT 43 YS2-20l10.p1k chr16 127 42 946038 946123 C 86 83.72 1356 reject_low 153 ALIGNMENT 63 YS2-20l10.p1k chr02 34 127 1633 1726 F 94 89.36 1356 reject_low 54 ALIGNMENT 51 YS2-20l10.p1k chr08 127 34 560493 560586 C 94 85.11 1356 reject_low 101 ALIGNMENT 67 YS2-20l10.p1k chr04 127 42 1530176 1530261 C 86 93.02 1356 reject_low 56 ALIGNMENT 0 YS2-20l10.p1k chr02 138 842 1520 1519 F 705 0.00 1356 reject_low 183 ALIGNMENT 43 YS2-20l10.p1k chr12 127 42 1069894 1069979 C 86 83.72 1356 reject_low 144 ALIGNMENT 0 YS2-20l10.p1k chr14 128 842 1778 1777 F 715 0.00 1356 reject_low 90 ALIGNMENT 69 YS2-20l10.p1k chr08 34 127 1762 1855 F 94 91.49 1356 reject_low 42 ALIGNMENT 0 YS2-20l10.p1k chr04 842 128 1530321 1530320 C 715 0.00 1356 reject_low 169 ALIGNMENT 0 YS2-20l10.p1k chr16 842 128 946183 946182 C 715 0.00 1356 reject_low 104 ALIGNMENT 1023 YS2-20l10.q1k chr12 49 1198 1074912 1076054 F 1150 96.70 1284 reject_low 19 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 7638 7637 F 715 0.00 1356 reject_low 49 ALIGNMENT 70 YS2-20l10.p1k chr12 42 127 7553 7638 F 86 94.19 1356 reject_low 49 ALIGNMENT 49 YS2-20l10.p1k chr15 127 33 1089449 1089543 C 95 84.21 1356 reject_low 93 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 7422 7421 F 715 0.00 1356 reject_low 115 ALIGNMENT 81 YS2-20l10.p1k chr07 137 34 1089108 1089211 C 104 93.27 1356 reject_low 22 ALIGNMENT 0 YS2-20l10.p1k chr02 128 842 1726 1725 F 715 0.00 1356 reject_low 54 ALIGNMENT 78 YS2-20l10.p1k chr09 34 137 1977 2080 F 104 92.31 1356 reject_low 31 ALIGNMENT 0 YS2-20l10.p1k chr09 112 842 2378 2377 F 731 0.00 1356 reject_low 164 ALIGNMENT 0 YS2-20l10.p1k chr05 842 128 575222 575221 C 715 0.00 1356 reject_low 113 ALIGNMENT 40 YS2-20l10.p1k chr04 127 42 1530140 1530225 C 86 82.56 1356 reject_low 156 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 7530 7529 F 715 0.00 1356 reject_low 82 ALIGNMENT 0 YS2-20l10.p1k chr14 62 101 1573 1572 F 40 0.00 1356 reject_low 193 ALIGNMENT 0 YS2-20l10.p1k chr09 128 842 1998 1997 F 715 0.00 1356 reject_low 41 ALIGNMENT 34 YS2-20l10.p1k chr14 42 127 1657 1742 F 86 80.23 1356 reject_low 179 ALIGNMENT 0 YS2-20l10.p1k chr16 842 138 946101 946100 C 705 0.00 1356 reject_low 30 ALIGNMENT 70 YS2-20l10.p1k chr05 127 42 575005 575090 C 86 94.19 1356 reject_low 46 ALIGNMENT 26 YS2-20l10.p1k chr12 78 127 1694 1743 F 50 84.00 1356 reject_low 198 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 7674 7673 F 715 0.00 1356 reject_low 143 ALIGNMENT 1021 YS2-20l10.q1k chr02 1198 49 2625 3769 C 1150 96.70 1284 ambiguous_tel 12 ALIGNMENT 0 YS2-20l10.p1k chr16 138 842 1517 1516 F 705 0.00 1356 reject_low 195 ALIGNMENT 0 YS2-20l10.p1k chr15 842 128 1089414 1089413 C 715 0.00 1356 reject_low 92 ALIGNMENT 73 YS2-20l10.p1k chr09 36 127 1907 1998 F 92 93.48 1356 reject_low 41 ALIGNMENT 0 YS2-20l10.p1k chr09 62 77 1697 1696 F 16 0.00 1356 reject_low 197 ALIGNMENT 49 YS2-20l10.p1k chr12 127 33 1076449 1076543 C 95 84.21 1356 reject_low 86 ALIGNMENT 0 YS2-20l10.p1k chr05 130 842 1712 1711 F 713 0.00 1356 reject_low 64 ALIGNMENT 0 YS2-20l10.p1k chr16 128 842 1579 1578 F 715 0.00 1356 reject_low 121 ALIGNMENT 0 YS2-20l10.p1k chr14 128 842 1814 1813 F 715 0.00 1356 reject_low 91 ALIGNMENT 0 YS2-20l10.p1k chr04 842 138 1530455 1530454 C 705 0.00 1356 reject_low 184 ALIGNMENT 0 YS2-20l10.p1k chr16 128 842 1615 1614 F 715 0.00 1356 reject_low 151 ALIGNMENT 49 YS2-20l10.p1k chr13 33 127 1777 1871 F 95 84.21 1356 reject_low 88 ALIGNMENT 0 YS2-20l10.p1k chr16 842 128 946327 946326 C 715 0.00 1356 reject_low 105 ALIGNMENT 0 YS2-20l10.p1k chr02 138 842 2096 2095 F 705 0.00 1356 reject_low 155 ALIGNMENT 0 YS2-20l10.p1k chr05 138 842 1756 1755 F 705 0.00 1356 reject_low 122 ALIGNMENT 25 YS2-20l10.p1k chr16 137 102 946460 946495 C 36 91.67 1356 reject_low 196 ALIGNMENT 43 YS2-20l10.p1k chr12 42 127 2054 2139 F 86 83.72 1356 reject_low 141 ALIGNMENT 22 YS2-20l10.p1k chr09 102 127 1685 1710 F 26 96.15 1356 reject_low 201 ALIGNMENT 37 YS2-20l10.p1k chr12 42 127 1874 1959 F 86 81.40 1356 reject_low 167 ALIGNMENT 1026 YS2-20l10.q1k chr12 1198 49 2426 3568 C 1150 96.78 1284 ambiguous_tel 0 ALIGNMENT 0 YS2-20l10.p1k chr08 842 128 560530 560529 C 715 0.00 1356 reject_low 125 ALIGNMENT 45 YS2-20l10.p1k chr12 127 34 1069930 1070023 C 94 82.98 1356 reject_low 116 ALIGNMENT 0 YS2-20l10.p1k chr15 842 128 1089558 1089557 C 715 0.00 1356 reject_low 120 ALIGNMENT 0 YS2-20l10.p1k chr13 138 842 1701 1700 F 705 0.00 1356 reject_low 192 ALIGNMENT 987 YS2-20l10.q1k chr08 1198 49 2154 3300 C 1150 95.74 1284 ambiguous_tel 14 ALIGNMENT 0 YS2-20l10.p1k chr12 62 101 1682 1681 F 40 0.00 1356 reject_low 188 ALIGNMENT 0 YS2-20l10.p1k chr16 62 101 1482 1481 F 40 0.00 1356 reject_low 195 ALIGNMENT 0 YS2-20l10.p1k chr05 128 842 1602 1601 F 715 0.00 1356 reject_low 170 ALIGNMENT 0 YS2-20l10.p1k chr16 77 62 946484 946483 C 16 0.00 1356 reject_low 199 ALIGNMENT 0 YS2-20l10.p1k chr09 138 842 1828 1827 F 705 0.00 1356 reject_low 67 ALIGNMENT 0 YS2-20l10.p1k chr13 128 842 2015 2014 F 715 0.00 1356 reject_low 147 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 1959 1958 F 715 0.00 1356 reject_low 167 ALIGNMENT 0 YS2-20l10.p1k chr02 130 842 1692 1691 F 713 0.00 1356 reject_low 71 ALIGNMENT 0 YS2-20l10.p1k chr12 101 62 1070028 1070027 C 40 0.00 1356 reject_low 190 ALIGNMENT 50 YS2-20l10.p1k chr02 33 129 1596 1692 F 97 84.54 1356 reject_low 71 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 2103 2102 F 715 0.00 1356 reject_low 48 ALIGNMENT 0 YS2-20l10.p1k chr13 138 842 1953 1952 F 705 0.00 1356 reject_low 26 ALIGNMENT 57 YS2-20l10.p1k chr05 34 137 1725 1828 F 104 85.58 1356 reject_low 55 ALIGNMENT 0 YS2-20l10.p1k chr12 842 138 1069993 1069992 C 705 0.00 1356 reject_low 190 ALIGNMENT 0 YS2-20l10.p1k chr12 62 77 1694 1693 F 16 0.00 1356 reject_low 198 ALIGNMENT 0 YS2-20l10.p1k chr15 842 138 1089620 1089619 C 705 0.00 1356 reject_low 194 ALIGNMENT 43 YS2-20l10.p1k chr06 42 127 976 1061 F 86 83.72 1356 reject_low 137 ALIGNMENT 953 YS2-20l10.p1k chr05 1219 42 573801 574982 C 1178 94.91 1356 ambiguous_tel 11 ALIGNMENT 84 YS2-20l10.p1k chr09 34 137 2121 2224 F 104 94.23 1356|0,3 reject_low 15 ALIGNMENT 955 YS2-20l10.p1k chr13 42 1242 2002 3209 F 1201 94.50 1356 ambiguous_tel 10 ALIGNMENT 0 YS2-20l10.p1k chr12 128 842 1995 1994 F 715 0.00 1356 reject_low 65 ALIGNMENT 25 YS2-20l10.p1k chr08 137 102 560807 560842 C 36 91.67 1356 reject_low 187 ALIGNMENT 0 YS2-20l10.p1k chr05 842 128 575114 575113 C 715 0.00 1356 reject_low 77 ALIGNMENT 0 YS2-20l11.q1k chr04 524 62 220645 220644 C 463 0.00 1235 reject_low 1 ALIGNMENT 1059 YS2-20l11.p1k chr04 33 1257 120113 121351 F 1225 97.06 1344 accept 0 ALIGNMENT 987 YS2-20l11.q1k chr04 1177 37 124189 125336 C 1141 95.88 1235 accept 0 ALIGNMENT 415 YS2-20l11.q1k chr04 1142 525 220021 220644 C 618 89.32 1235 reject_low 1 ALIGNMENT 0 YS2-20l12.q1k vc_2 534 62 2146 2145 C 473 0.00 575 reject_low 3 ALIGNMENT 0 YS2-20l12.q1k vc_3 534 62 2513 2512 C 473 0.00 575 reject_low 4 ALIGNMENT 39 YS2-20l12.q1k vc_5 575 537 5025 5063 C 39 100.00 575 reject_low 6 ALIGNMENT 0 YS2-20l12.p1k chr11 526 544 636084 636083 F 19 0.00 544 accept_chi 1 ALIGNMENT 0 YS2-20l12.q1k vc_4 62 534 5831 5830 F 473 0.00 575 reject_low 5 ALIGNMENT 38 YS2-20l12.q1k vc_7 538 575 13525 13562 F 38 100.00 575 reject_low 7 ALIGNMENT 0 YS2-20l12.q1k vc_1 534 62 2513 2512 C 473 0.00 575 reject_low 2 ALIGNMENT 0 YS2-20l12.q1k vc_7 62 537 13525 13524 F 476 0.00 575 reject_low 7 ALIGNMENT 0 YS2-20l12.q1k vc_5 536 62 5064 5063 C 475 0.00 575 reject_low 6 ALIGNMENT 41 YS2-20l12.q1k vc_3 575 535 2472 2512 C 41 100.00 575 reject_low 4 ALIGNMENT 41 YS2-20l12.q1k vc_1 575 535 2472 2512 C 41 100.00 575 reject_low 2 ALIGNMENT 0 YS2-20l12.q1k vc_5 536 62 37 36 C 475 0.00 575 reject_low 8 ALIGNMENT 36 YS2-20l12.q1k vc_5 572 537 1 36 C 36 100.00 575 reject_low 8 ALIGNMENT 482 YS2-20l12.q1k chr11 535 37 635586 636084 C 499 100.00 575 accept_chi 0 ALIGNMENT 0 YS2-20l12.q1k chr11 575 536 635587 635586 C 40 0.00 575 accept_chi 0 ALIGNMENT 41 YS2-20l12.q1k vc_2 575 535 2105 2145 C 41 100.00 575 reject_low 3 ALIGNMENT 41 YS2-20l12.q1k vc_4 535 575 5831 5871 F 41 100.00 575 reject_low 5 ALIGNMENT 472 YS2-20l12.p1k chr11 37 525 635596 636084 F 489 100.00 544 accept_chi 1 ALIGNMENT 40 YS2-20l14.q1k vc_3 354 315 2472 2511 C 40 100.00 354 reject_low 8 ALIGNMENT 0 YS2-20l14.p1k chr08 306 324 89507 89506 F 19 0.00 324 ambiguous_trans 0 ALIGNMENT 0 YS2-20l14.q1k vc_5 315 62 5064 5063 C 254 0.00 354 reject_low 10 ALIGNMENT 0 YS2-20l14.q1k chr16 315 354 439414 439413 F 40 0.00 354 ambiguous_trans 5 ALIGNMENT 0 YS2-20l14.q1k vc_3 314 62 2512 2511 C 253 0.00 354 reject_low 8 ALIGNMENT 36 YS2-20l14.q1k vc_5 351 316 1 36 C 36 100.00 354 reject_low 12 ALIGNMENT 0 YS2-20l14.q1k vc_2 314 62 2145 2144 C 253 0.00 354 reject_low 7 ALIGNMENT 39 YS2-20l14.q1k vc_5 354 316 5025 5063 C 39 100.00 354 reject_low 10 ALIGNMENT 0 YS2-20l14.p1k chr16 324 306 439138 439137 C 19 0.00 324 ambiguous_trans 2 ALIGNMENT 40 YS2-20l14.q1k vc_4 315 354 5832 5871 F 40 100.00 354 reject_low 9 ALIGNMENT 38 YS2-20l14.q1k vc_7 317 354 13525 13562 F 38 100.00 354 reject_low 11 ALIGNMENT 0 YS2-20l14.q1k vc_5 315 62 37 36 C 254 0.00 354 reject_low 12 ALIGNMENT 0 YS2-20l14.q1k vc_7 62 316 13525 13524 F 255 0.00 354 reject_low 11 ALIGNMENT 262 YS2-20l14.p1k chr16 305 29 439137 439413 C 277 100.00 324 ambiguous_trans 2 ALIGNMENT 40 YS2-20l14.q1k vc_2 354 315 2105 2144 C 40 100.00 354 reject_low 7 ALIGNMENT 0 YS2-20l14.q1k chr10 354 315 201163 201162 C 40 0.00 354 ambiguous_trans 4 ALIGNMENT 0 YS2-20l14.q1k chr08 354 315 89231 89230 C 40 0.00 354 ambiguous_trans 3 ALIGNMENT 253 YS2-20l14.q1k chr10 314 39 201162 201439 C 276 99.28 354 ambiguous_trans 4 ALIGNMENT 40 YS2-20l14.q1k vc_1 354 315 2472 2511 C 40 100.00 354 reject_low 6 ALIGNMENT 262 YS2-20l14.p1k chr10 29 305 201163 201439 F 277 100.00 324 ambiguous_trans 1 ALIGNMENT 253 YS2-20l14.q1k chr16 39 314 439137 439414 F 276 99.28 354 ambiguous_trans 5 ALIGNMENT 253 YS2-20l14.q1k chr08 314 39 89230 89507 C 276 99.28 354 ambiguous_trans 3 ALIGNMENT 0 YS2-20l14.p1k chr10 306 324 201439 201438 F 19 0.00 324 ambiguous_trans 1 ALIGNMENT 0 YS2-20l14.q1k vc_1 314 62 2512 2511 C 253 0.00 354 reject_low 6 ALIGNMENT 0 YS2-20l14.q1k vc_4 62 314 5832 5831 F 253 0.00 354 reject_low 9 ALIGNMENT 262 YS2-20l14.p1k chr08 29 305 89231 89507 F 277 100.00 324 ambiguous_trans 0 ALIGNMENT 0 YS2-20l15.q1k chr16 62 602 436247 436246 F 541 0.00 1199 reject_low 28 ALIGNMENT 0 YS2-20l15.q1k chr02 925 897 221077 221076 C 29 0.00 1199 reject_low 16 ALIGNMENT 0 YS2-20l15.q1k chr07 925 742 817275 817274 C 184 0.00 1199 reject_low 27 ALIGNMENT 121 YS2-20l15.q1k chr02 832 603 327167 327393 C 230 87.39 1199 reject_low 21 ALIGNMENT 0 YS2-20l15.q1k chr13 62 601 362585 362584 F 540 0.00 1199 reject_low 12 ALIGNMENT 977 YS2-20l15.p1k chr10 31 1155 335857 336994 F 1125 96.53 1297 accept_chi 0 ALIGNMENT 0 YS2-20l15.q1k chr13 897 925 372997 372996 F 29 0.00 1199 reject_low 19 ALIGNMENT 0 YS2-20l15.q1k chr16 811 825 436454 436480 F 15 0.00 1199 reject_low 28 ALIGNMENT 0 YS2-20l15.q1k chr16 602 62 62376 62375 C 541 0.00 1199 reject_low 9 ALIGNMENT 152 YS2-20l15.q1k chr14 603 896 96610 96905 F 294 86.05 1199 reject_low 11 ALIGNMENT 57 YS2-20l15.q1k chr01 490 555 182613 182678 F 66 96.97 1199 reject_low 3 ALIGNMENT 0 YS2-20l15.q1k chr01 62 602 160239 160238 F 541 0.00 1199 reject_low 7 ALIGNMENT 0 YS2-20l15.q1k chr01 62 601 165826 165825 F 540 0.00 1199 reject_low 5 ALIGNMENT 138 YS2-20l15.q1k chr01 603 910 160239 160554 F 308 84.42 1199 reject_low 7 ALIGNMENT 0 YS2-20l15.q1k chr12 911 925 481877 481876 F 15 0.00 1199 reject_low 6 ALIGNMENT 139 YS2-20l15.q1k chr01 602 910 165826 166142 F 309 84.47 1199 reject_low 5 ALIGNMENT 0 YS2-20l15.q1k chr12 62 601 481561 481560 F 540 0.00 1199 reject_low 6 ALIGNMENT 44 YS2-20l15.q1k chr16 891 777 436093 436207 C 115 81.74 1199 reject_low 26 ALIGNMENT 48 YS2-20l15.q1k chr16 501 555 856551 856605 F 55 98.18 1199 reject_low 4 ALIGNMENT 0 YS2-20l15.q1k chr16 897 925 850926 850925 F 29 0.00 1199 reject_low 17 ALIGNMENT 0 YS2-20l15.q1k chr16 925 892 436094 436093 C 34 0.00 1199 reject_low 26 ALIGNMENT 0 YS2-20l15.q1k chr03 725 925 83176 83175 F 201 0.00 1199 reject_low 25 ALIGNMENT 0 YS2-20l15.q1k chr16 62 601 856212 856211 F 540 0.00 1199 reject_low 18 ALIGNMENT 0 YS2-20l15.q1k chr15 889 925 3180 3179 F 37 0.00 1199 reject_low 15 ALIGNMENT 59 YS2-20l15.q1k chr16 491 555 769317 769381 F 65 98.46 1199 reject_low 2 ALIGNMENT 0 YS2-20l15.q1k chr06 611 62 143858 143857 C 550 0.00 1199 reject_low 24 ALIGNMENT 146 YS2-20l15.q1k chr15 613 888 2904 3180 F 276 86.23 1199 reject_low 15 ALIGNMENT 0 YS2-20l15.q1k chr05 925 900 138255 138254 C 26 0.00 1199 reject_low 20 ALIGNMENT 150 YS2-20l15.q1k chr13 615 896 357016 357299 F 282 86.52 1199 reject_low 14 ALIGNMENT 0 YS2-20l15.q1k chr16 897 925 856514 856513 F 29 0.00 1199 reject_low 18 ALIGNMENT 111 YS2-20l15.q1k chr16 603 810 436247 436453 F 208 87.50 1199 reject_low 28 ALIGNMENT 143 YS2-20l15.q1k chr02 896 615 221076 221361 C 282 85.82 1199 reject_low 16 ALIGNMENT 0 YS2-20l15.q1k chr02 614 62 221362 221361 C 553 0.00 1199 reject_low 16 ALIGNMENT 125 YS2-20l15.q1k chr05 899 603 138254 138553 C 297 82.83 1199 reject_low 20 ALIGNMENT 138 YS2-20l15.q1k chr16 910 603 62060 62375 C 308 84.42 1199 reject_low 9 ALIGNMENT 0 YS2-20l15.q1k chr16 900 925 436555 436554 F 26 0.00 1199 reject_low 28 ALIGNMENT 0 YS2-20l15.q1k chr16 62 500 856551 856550 F 439 0.00 1199 reject_low 4 ALIGNMENT 891 YS2-20l15.q1k chr08 1119 40 466346 467426 C 1080 96.02 1199 accept_chi 1 ALIGNMENT 0 YS2-20l15.q1k chr15 62 612 2904 2903 F 551 0.00 1199 reject_low 15 ALIGNMENT 0 YS2-20l15.q1k chr06 632 62 158655 158654 C 571 0.00 1199 reject_low 10 ALIGNMENT 80 YS2-20l15.q1k chr06 881 669 137702 137907 C 213 82.63 1199|0,2 reject_low 29 ALIGNMENT 0 YS2-20l15.q1k chr03 925 835 295100 295099 C 91 0.00 1199 reject_low 22 ALIGNMENT 139 YS2-20l15.q1k chr12 602 910 481561 481877 F 309 84.47 1199 reject_low 6 ALIGNMENT 59 YS2-20l15.q1k chr03 603 724 83054 83176 F 122 86.07 1199 reject_low 25 ALIGNMENT 0 YS2-20l15.q1k chr06 925 889 143580 143579 C 37 0.00 1199 reject_low 24 ALIGNMENT 0 YS2-20l15.q1k chr01 911 925 160554 160553 F 15 0.00 1199 reject_low 7 ALIGNMENT 0 YS2-20l15.q1k chr16 925 911 62061 62060 C 15 0.00 1199 reject_low 9 ALIGNMENT 0 YS2-20l15.q1k chr13 897 925 357299 357298 F 29 0.00 1199 reject_low 14 ALIGNMENT 0 YS2-20l15.q1k chr06 611 62 138231 138230 C 550 0.00 1199 reject_low 23 ALIGNMENT 128 YS2-20l15.q1k chr13 603 896 372696 372997 F 294 83.67 1199 reject_low 19 ALIGNMENT 67 YS2-20l15.q1k chr06 888 612 143579 143857 C 277 78.34 1199 reject_low 24 ALIGNMENT 0 YS2-20l15.q1k chr16 556 925 769381 769380 F 370 0.00 1199 reject_low 2 ALIGNMENT 135 YS2-20l15.q1k chr16 601 896 850623 850926 F 296 84.46 1199 reject_low 17 ALIGNMENT 149 YS2-20l15.q1k chr07 603 896 817398 817693 F 294 85.71 1199 reject_low 13 ALIGNMENT 0 YS2-20l15.q1k chr13 62 614 357016 357015 F 553 0.00 1199 reject_low 14 ALIGNMENT 0 YS2-20l15.q1k chr14 897 925 96905 96904 F 29 0.00 1199 reject_low 11 ALIGNMENT 0 YS2-20l15.q1k chr03 602 62 83036 83035 C 541 0.00 1199 reject_low 8 ALIGNMENT 0 YS2-20l15.q1k chr05 602 62 138554 138553 C 541 0.00 1199 reject_low 20 ALIGNMENT 0 YS2-20l15.q1k chr06 925 882 137703 137702 C 44 0.00 1199 reject_low 29 ALIGNMENT 0 YS2-20l15.q1k chr13 897 925 362881 362880 F 29 0.00 1199 reject_low 12 ALIGNMENT 0 YS2-20l15.q1k chr06 670 671 137906 143869 C 0 0.00 1199 reject_low 29 ALIGNMENT 0 YS2-20l15.q1k chr01 62 489 182613 182612 F 428 0.00 1199 reject_low 3 ALIGNMENT 0 YS2-20l15.q1k chr02 925 833 327168 327167 C 93 0.00 1199 reject_low 21 ALIGNMENT 99 YS2-20l15.q1k chr03 834 609 295099 295320 C 226 84.51 1199 reject_low 22 ALIGNMENT 0 YS2-20l15.q1k chr06 925 889 137953 137952 C 37 0.00 1199 reject_low 23 ALIGNMENT 0 YS2-20l15.q1k chr16 62 600 850623 850622 F 539 0.00 1199 reject_low 17 ALIGNMENT 0 YS2-20l15.q1k chr14 62 602 96610 96609 F 541 0.00 1199 reject_low 11 ALIGNMENT 0 YS2-20l15.q1k chr03 62 602 83054 83053 F 541 0.00 1199 reject_low 25 ALIGNMENT 0 YS2-20l15.q1k chr16 776 62 436208 436207 C 715 0.00 1199 reject_low 26 ALIGNMENT 30 YS2-20l15.q1k chr16 826 899 436481 436555 F 74 81.08 1199 reject_low 28 ALIGNMENT 149 YS2-20l15.q1k chr13 602 896 362585 362881 F 295 85.76 1199 reject_low 12 ALIGNMENT 0 YS2-20l15.q1k chr03 925 911 82721 82720 C 15 0.00 1199 reject_low 8 ALIGNMENT 67 YS2-20l15.q1k chr06 888 612 137952 138230 C 277 78.34 1199 reject_low 23 ALIGNMENT 0 YS2-20l15.q1k chr06 602 62 143938 143937 C 541 0.00 1199 reject_low 29 ALIGNMENT 24 YS2-20l15.q1k chr06 672 603 143868 143937 C 70 82.86 1199|2,0 reject_low 29 ALIGNMENT 0 YS2-20l15.q1k chr01 911 925 166142 166141 F 15 0.00 1199 reject_low 5 ALIGNMENT 0 YS2-20l15.q1k chr01 556 925 182678 182677 F 370 0.00 1199 reject_low 3 ALIGNMENT 0 YS2-20l15.q1k chr16 556 925 856605 856604 F 370 0.00 1199 reject_low 4 ALIGNMENT 128 YS2-20l15.q1k chr16 602 896 856212 856514 F 295 83.73 1199 reject_low 18 ALIGNMENT 0 YS2-20l15.q1k chr07 62 602 817398 817397 F 541 0.00 1199 reject_low 13 ALIGNMENT 0 YS2-20l15.q1k chr03 608 62 295321 295320 C 547 0.00 1199 reject_low 22 ALIGNMENT 0 YS2-20l15.q1k chr07 625 62 817388 817387 C 564 0.00 1199 reject_low 27 ALIGNMENT 119 YS2-20l15.q1k chr06 915 633 158372 158654 C 283 83.39 1199 reject_low 10 ALIGNMENT 0 YS2-20l15.q1k chr13 62 602 372696 372695 F 541 0.00 1199 reject_low 19 ALIGNMENT 138 YS2-20l15.q1k chr03 910 603 82720 83035 C 308 84.42 1199 reject_low 8 ALIGNMENT 0 YS2-20l15.q1k chr16 62 490 769317 769316 F 429 0.00 1199 reject_low 2 ALIGNMENT 0 YS2-20l15.q1k chr02 602 62 327394 327393 C 541 0.00 1199 reject_low 21 ALIGNMENT 0 YS2-20l15.q1k chr07 897 925 817693 817692 F 29 0.00 1199 reject_low 13 ALIGNMENT 43 YS2-20l15.q1k chr07 741 626 817274 817387 C 116 82.76 1199 reject_low 27 ALIGNMENT 41 YS2-20l18.q1k vc_1 298 258 2472 2512 C 41 100.00 298 reject_low 2 ALIGNMENT 0 YS2-20l18.q1k chr15 258 298 714528 714527 F 41 0.00 298 accept_chi 1 ALIGNMENT 0 YS2-20l18.q1k vc_5 259 62 37 36 C 198 0.00 298 reject_low 7 ALIGNMENT 207 YS2-20l18.q1k chr15 25 257 714295 714528 F 233 99.14 298 accept_chi 1 ALIGNMENT 36 YS2-20l18.q1k vc_5 295 260 1 36 C 36 100.00 298 reject_low 7 ALIGNMENT 212 YS2-20l18.p1k chr15 263 30 714295 714528 C 234 99.57 281 accept_chi 0 ALIGNMENT 0 YS2-20l18.p1k chr15 281 264 714296 714295 C 18 0.00 281 accept_chi 0 ALIGNMENT 0 YS2-20l18.q1k vc_3 257 62 2513 2512 C 196 0.00 298 reject_low 3 ALIGNMENT 41 YS2-20l18.q1k vc_3 298 258 2472 2512 C 41 100.00 298 reject_low 3 ALIGNMENT 41 YS2-20l18.q1k vc_4 258 298 5831 5871 F 41 100.00 298 reject_low 4 ALIGNMENT 0 YS2-20l18.q1k vc_1 257 62 2513 2512 C 196 0.00 298 reject_low 2 ALIGNMENT 0 YS2-20l18.q1k vc_7 62 260 13525 13524 F 199 0.00 298 reject_low 6 ALIGNMENT 0 YS2-20l18.q1k vc_5 259 62 5064 5063 C 198 0.00 298 reject_low 5 ALIGNMENT 39 YS2-20l18.q1k vc_5 298 260 5025 5063 C 39 100.00 298 reject_low 5 ALIGNMENT 38 YS2-20l18.q1k vc_7 261 298 13525 13562 F 38 100.00 298 reject_low 6 ALIGNMENT 0 YS2-20l18.q1k vc_4 62 257 5831 5830 F 196 0.00 298 reject_low 4 ALIGNMENT 765 YS2-20l19.q1k chr13 984 40 129886 130823 C 945 95.56 1132 accept 0 ALIGNMENT 0 YS2-20l19.q1k chr13 752 62 130186 130185 C 691 0.00 1132 reject_low 2 ALIGNMENT 39 YS2-20l19.q1k chr13 816 753 130123 130185 C 64 89.06 1132 reject_low 2 ALIGNMENT 41 YS2-20l19.q1k chr13 740 670 130048 130118 C 71 85.92 1132 reject_low 1 ALIGNMENT 0 YS2-20l19.q1k chr13 669 62 130119 130118 C 608 0.00 1132 reject_low 1 ALIGNMENT 1001 YS2-20l19.p1k chr13 30 1213 126302 127498 F 1184 95.86 1272 accept 0 ALIGNMENT 992 YS2-20l20.p1k chr04 27 1273 1068888 1070149 F 1247 94.87 1277 accept 0 ALIGNMENT 578 YS2-20l20.q1k chr04 748 34 1072638 1073337 C 715 95.80 1143 accept 0 ALIGNMENT 1054 YS2-20l21.p1k chr08 37 1248 428387 429610 F 1212 96.95 1345 accept 0 ALIGNMENT 921 YS2-20l23.q1k chr13 1035 36 510284 511286 C 1000 98.10 1037 accept_chi 1 ALIGNMENT 1085 YS2-20l23.p1k chr12 1286 32 816186 817451 C 1255 96.25 1286 accept_chi 0 ALIGNMENT 445 YS2-20l24.p1k chr13 31 500 686778 687248 F 470 99.36 516 accept_chi 1 ALIGNMENT 0 YS2-20l24.q1k vc_7 62 506 13525 13524 F 445 0.00 544 reject_low 6 ALIGNMENT 36 YS2-20l24.q1k vc_5 541 506 1 36 C 36 100.00 544 reject_low 7 ALIGNMENT 0 YS2-20l24.q1k chr13 544 505 686779 686778 C 40 0.00 544 accept_chi 0 ALIGNMENT 40 YS2-20l24.q1k vc_1 544 505 2472 2511 C 40 100.00 544 reject_low 2 ALIGNMENT 450 YS2-20l24.q1k chr13 504 34 686778 687248 C 471 99.58 544 accept_chi 0 ALIGNMENT 0 YS2-20l24.q1k vc_3 504 62 2512 2511 C 443 0.00 544 reject_low 3 ALIGNMENT 0 YS2-20l24.p1k chr13 501 516 687248 687247 F 16 0.00 516 accept_chi 1 ALIGNMENT 0 YS2-20l24.q1k vc_4 62 504 5832 5831 F 443 0.00 544 reject_low 4 ALIGNMENT 38 YS2-20l24.q1k vc_7 507 544 13525 13562 F 38 100.00 544 reject_low 6 ALIGNMENT 0 YS2-20l24.q1k vc_1 504 62 2512 2511 C 443 0.00 544 reject_low 2 ALIGNMENT 40 YS2-20l24.q1k vc_3 544 505 2472 2511 C 40 100.00 544 reject_low 3 ALIGNMENT 0 YS2-20l24.q1k vc_5 505 62 5064 5063 C 444 0.00 544 reject_low 5 ALIGNMENT 0 YS2-20l24.q1k vc_5 505 62 37 36 C 444 0.00 544 reject_low 7 ALIGNMENT 39 YS2-20l24.q1k vc_5 544 506 5025 5063 C 39 100.00 544 reject_low 5 ALIGNMENT 40 YS2-20l24.q1k vc_4 505 544 5832 5871 F 40 100.00 544 reject_low 4 ALIGNMENT 913 YS2-20m01.p1k chr14 1157 47 389975 391104 C 1111 95.23 1260 accept 0 ALIGNMENT 938 YS2-20m01.q1k chr14 48 1148 389670 390776 F 1101 96.37 1245 accept 0 ALIGNMENT 0 YS2-20m03.q1k vc_3 423 62 2513 2512 C 362 0.00 464 reject_low 5 ALIGNMENT 0 YS2-20m03.q1k chr12 424 464 465666 465665 F 41 0.00 464 reject_low 1 ALIGNMENT 41 YS2-20m03.q1k vc_3 464 424 2472 2512 C 41 100.00 464 reject_low 5 ALIGNMENT 0 YS2-20m03.q1k vc_5 425 62 5064 5063 C 364 0.00 464 reject_low 7 ALIGNMENT 0 YS2-20m03.q1k vc_2 423 62 2146 2145 C 362 0.00 464 reject_low 4 ALIGNMENT 370 YS2-20m03.q1k chr12 40 423 456146 456529 F 384 98.96 464 accept 0 ALIGNMENT 366 YS2-20m03.p1k chr12 408 33 456146 456522 C 376 99.47 426 reject_low 2 ALIGNMENT 39 YS2-20m03.q1k vc_5 464 426 5025 5063 C 39 100.00 464 reject_low 7 ALIGNMENT 38 YS2-20m03.q1k vc_7 427 464 13525 13562 F 38 100.00 464 reject_low 8 ALIGNMENT 0 YS2-20m03.q1k vc_5 425 62 37 36 C 364 0.00 464 reject_low 9 ALIGNMENT 0 YS2-20m03.q1k vc_7 62 426 13525 13524 F 365 0.00 464 reject_low 8 ALIGNMENT 41 YS2-20m03.q1k vc_4 424 464 5831 5871 F 41 100.00 464 reject_low 6 ALIGNMENT 41 YS2-20m03.q1k vc_2 464 424 2105 2145 C 41 100.00 464 reject_low 4 ALIGNMENT 366 YS2-20m03.p1k chr12 408 33 465283 465659 C 376 99.47 426 accept 0 ALIGNMENT 36 YS2-20m03.q1k vc_5 461 426 1 36 C 36 100.00 464 reject_low 9 ALIGNMENT 0 YS2-20m03.q1k chr12 424 464 456529 456528 F 41 0.00 464 accept 0 ALIGNMENT 41 YS2-20m03.q1k vc_1 464 424 2472 2512 C 41 100.00 464 reject_low 3 ALIGNMENT 0 YS2-20m03.q1k vc_4 62 423 5831 5830 F 362 0.00 464 reject_low 6 ALIGNMENT 0 YS2-20m03.p1k chr12 426 409 465284 465283 C 18 0.00 426 accept 0 ALIGNMENT 0 YS2-20m03.q1k vc_1 423 62 2513 2512 C 362 0.00 464 reject_low 3 ALIGNMENT 0 YS2-20m03.p1k chr12 426 409 456147 456146 C 18 0.00 426 reject_low 2 ALIGNMENT 370 YS2-20m03.q1k chr12 40 423 465283 465666 F 384 98.96 464 reject_low 1 ALIGNMENT 1102 YS2-20m04.p1k chr13 37 1287 139624 140880 F 1251 96.72 1359 accept 0 ALIGNMENT 973 YS2-20m04.q1k chr13 1170 51 144291 145411 C 1120 97.05 1364 accept 0 ALIGNMENT 971 YS2-20m05.q1k chr15 42 1136 910798 911905 F 1095 97.53 1254 accept 0 ALIGNMENT 949 YS2-20m06.p1k chr02 46 1144 16337 17452 F 1099 96.18 1310 accept 0 ALIGNMENT 985 YS2-20m06.q1k chr02 1131 40 20938 22034 C 1092 97.80 1342 accept 0 ALIGNMENT 0 YS2-20m08.p1k chr12 220 588 1052142 1052141 F 369 0.00 588 reject_low 10 ALIGNMENT 76 YS2-20m08.q1k chr04 463 388 668001 668076 C 76 100.00 616 reject_low 20 ALIGNMENT 0 YS2-20m08.q1k chr05 388 62 551354 551353 C 327 0.00 616 reject_low 11 ALIGNMENT 76 YS2-20m08.p1k chr12 219 144 734803 734878 C 76 100.00 588 reject_low 21 ALIGNMENT 0 YS2-20m08.q1k chr09 616 463 183438 183437 C 154 0.00 616 reject_low 14 ALIGNMENT 0 YS2-20m08.p1k chr07 143 62 739202 739201 C 82 0.00 588 reject_low 29 ALIGNMENT 0 YS2-20m08.q1k chr09 62 371 210645 210644 F 310 0.00 616 reject_low 2 ALIGNMENT 0 YS2-20m08.p1k chr16 220 588 880366 880365 F 369 0.00 588 reject_low 25 ALIGNMENT 194 YS2-20m08.q1k chr09 372 576 210645 210849 F 205 98.54 616 reject_low 2 ALIGNMENT 0 YS2-20m08.q1k chr12 62 387 734803 734802 F 326 0.00 616 reject_low 22 ALIGNMENT 0 YS2-20m08.p1k chr09 221 588 183512 183511 F 368 0.00 588 reject_low 13 ALIGNMENT 0 YS2-20m08.p1k chr05 62 135 443189 443188 F 74 0.00 588 reject_low 6 ALIGNMENT 0 YS2-20m08.p1k chr12 588 220 734804 734803 C 369 0.00 588 reject_low 21 ALIGNMENT 0 YS2-20m08.q1k chr02 62 388 197497 197496 F 327 0.00 616 reject_low 28 ALIGNMENT 0 YS2-20m08.q1k vc_7 62 578 13525 13524 F 517 0.00 616 reject_low 32 ALIGNMENT 0 YS2-20m08.p1k chr12 143 62 734879 734878 C 82 0.00 588 reject_low 21 ALIGNMENT 76 YS2-20m08.q1k chr09 462 387 183437 183512 C 76 100.00 616 reject_low 14 ALIGNMENT 81 YS2-20m08.p1k chr05 136 219 443189 443272 F 84 98.81 588 reject_low 6 ALIGNMENT 78 YS2-20m08.q1k chr12 471 388 1052059 1052142 C 84 97.62 616 reject_low 9 ALIGNMENT 0 YS2-20m08.p1k chr04 62 143 668001 668000 F 82 0.00 588 reject_low 19 ALIGNMENT 0 YS2-20m08.q1k chr04 616 464 668002 668001 C 153 0.00 616 reject_low 20 ALIGNMENT 0 YS2-20m08.p1k chr02 143 62 197572 197571 C 82 0.00 588 reject_low 27 ALIGNMENT 307 YS2-20m08.p1k chr09 569 230 204878 205217 C 340 97.94 588|0,3 reject_low 1 ALIGNMENT 0 YS2-20m08.q1k chr05 616 473 551272 551271 C 144 0.00 616 reject_low 11 ALIGNMENT 36 YS2-20m08.q1k vc_5 613 578 1 36 C 36 100.00 616 reject_low 33 ALIGNMENT 0 YS2-20m08.p1k chr14 135 62 602396 602395 C 74 0.00 588 reject_low 8 ALIGNMENT 0 YS2-20m08.q1k chr09 378 616 205217 205216 F 239 0.00 616 accept_trans 0 ALIGNMENT 0 YS2-20m08.p1k chr05 219 588 551353 551352 F 370 0.00 588 reject_low 12 ALIGNMENT 0 YS2-20m08.p1k chr16 143 62 819600 819599 C 82 0.00 588 reject_low 23 ALIGNMENT 0 YS2-20m08.q1k chr16 62 387 819524 819523 F 326 0.00 616 reject_low 24 ALIGNMENT 75 YS2-20m08.p1k chr02 218 144 197497 197571 C 75 100.00 588 reject_low 27 ALIGNMENT 0 YS2-20m08.q1k chr14 62 387 602312 602311 F 326 0.00 616 reject_low 5 ALIGNMENT 22 YS2-20m08.q1k vc_5 42 21 2375 2396 C 22 100.00 616 reject_low 33 ALIGNMENT 76 YS2-20m08.p1k chr16 144 219 880291 880366 F 76 100.00 588 reject_low 25 ALIGNMENT 194 YS2-20m08.p1k chr09 235 31 210645 210849 C 205 98.54 588|3,0 accept_trans 0 reject_low 1 ALIGNMENT 0 YS2-20m08.p1k chr07 588 219 739128 739127 C 370 0.00 588 reject_low 29 ALIGNMENT 38 YS2-20m08.q1k vc_7 579 616 13525 13562 F 38 100.00 616 reject_low 32 ALIGNMENT 76 YS2-20m08.p1k chr09 145 220 183437 183512 F 76 100.00 588 reject_low 13 ALIGNMENT 75 YS2-20m08.p1k chr07 218 144 739127 739201 C 75 100.00 588 reject_low 29 ALIGNMENT 76 YS2-20m08.q1k chr16 463 388 880291 880366 C 76 100.00 616 reject_low 26 ALIGNMENT 0 YS2-20m08.p1k chr14 62 135 569859 569858 F 74 0.00 588 reject_low 7 ALIGNMENT 0 YS2-20m08.q1k chr14 472 616 602395 602394 F 145 0.00 616 reject_low 5 ALIGNMENT 0 YS2-20m08.p1k chr09 232 233 205215 210647 C 0 0.00 588 reject_low 1 ALIGNMENT 0 YS2-20m08.p1k chr12 62 135 1052059 1052058 F 74 0.00 588 reject_low 10 ALIGNMENT 81 YS2-20m08.q1k chr05 471 388 443189 443272 C 84 98.81 616 reject_low 3 ALIGNMENT 0 YS2-20m08.q1k vc_5 577 43 37 2374 C 535 0.00 616 reject_low 33 ALIGNMENT 0 YS2-20m08.q1k chr05 387 62 443273 443272 C 326 0.00 616 reject_low 3 ALIGNMENT 76 YS2-20m08.q1k chr12 388 463 734803 734878 F 76 100.00 616 reject_low 22 ALIGNMENT 0 YS2-20m08.q1k chr09 577 616 210849 210848 F 40 0.00 616 reject_low 2 ALIGNMENT 40 YS2-20m08.q1k vc_3 616 577 2472 2511 C 40 100.00 616 reject_low 17 ALIGNMENT 0 YS2-20m08.p1k chr09 588 570 204879 204878 C 19 0.00 588 reject_low 1 ALIGNMENT 0 YS2-20m08.q1k vc_3 576 62 2512 2511 C 515 0.00 616 reject_low 17 ALIGNMENT 76 YS2-20m08.p1k chr04 144 219 668001 668076 F 76 100.00 588 reject_low 19 ALIGNMENT 0 YS2-20m08.q1k chr05 616 472 443190 443189 C 145 0.00 616 reject_low 3 ALIGNMENT 0 YS2-20m08.p1k chr14 588 220 602313 602312 C 369 0.00 588 reject_low 8 ALIGNMENT 0 YS2-20m08.q1k chr16 387 62 880367 880366 C 326 0.00 616 reject_low 26 ALIGNMENT 0 YS2-20m08.p1k chr16 62 143 880291 880290 F 82 0.00 588 reject_low 25 ALIGNMENT 76 YS2-20m08.p1k chr16 219 144 819524 819599 C 76 100.00 588 reject_low 23 ALIGNMENT 0 YS2-20m08.p1k chr05 220 588 443272 443271 F 369 0.00 588 reject_low 6 ALIGNMENT 75 YS2-20m08.q1k chr02 389 463 197497 197571 F 75 100.00 616 reject_low 28 ALIGNMENT 40 YS2-20m08.q1k vc_4 577 616 5832 5871 F 40 100.00 616 reject_low 18 ALIGNMENT 0 YS2-20m08.q1k vc_2 576 62 2145 2144 C 515 0.00 616 reject_low 16 ALIGNMENT 0 YS2-20m08.q1k chr12 387 62 1052143 1052142 C 326 0.00 616 reject_low 9 ALIGNMENT 0 YS2-20m08.q1k vc_1 576 62 2512 2511 C 515 0.00 616 reject_low 15 ALIGNMENT 0 YS2-20m08.p1k chr14 220 588 569942 569941 F 369 0.00 588 reject_low 7 ALIGNMENT 0 YS2-20m08.q1k chr09 386 62 183513 183512 C 325 0.00 616 reject_low 14 ALIGNMENT 0 YS2-20m08.q1k vc_5 577 62 5064 5063 C 516 0.00 616 reject_low 31 ALIGNMENT 78 YS2-20m08.p1k chr12 136 219 1052059 1052142 F 84 97.62 588 reject_low 10 ALIGNMENT 0 YS2-20m08.p1k chr05 62 134 551271 551270 F 73 0.00 588 reject_low 12 ALIGNMENT 0 YS2-20m08.q1k chr14 616 472 569860 569859 C 145 0.00 616 reject_low 4 ALIGNMENT 0 YS2-20m08.p1k chr09 62 144 183437 183436 F 83 0.00 588 reject_low 13 ALIGNMENT 307 YS2-20m08.q1k chr09 38 377 204878 205217 F 340 97.94 616 accept_trans 0 ALIGNMENT 76 YS2-20m08.q1k chr16 388 463 819524 819599 F 76 100.00 616 reject_low 24 ALIGNMENT 0 YS2-20m08.q1k chr07 464 616 739201 739200 F 153 0.00 616 reject_low 30 ALIGNMENT 75 YS2-20m08.q1k chr07 389 463 739127 739201 F 75 100.00 616 reject_low 30 ALIGNMENT 81 YS2-20m08.q1k chr14 388 471 602312 602395 F 84 98.81 616 reject_low 5 ALIGNMENT 0 YS2-20m08.q1k chr16 616 464 880292 880291 C 153 0.00 616 reject_low 26 ALIGNMENT 0 YS2-20m08.p1k chr16 588 220 819525 819524 C 369 0.00 588 reject_low 23 ALIGNMENT 0 YS2-20m08.q1k chr16 464 616 819599 819598 F 153 0.00 616 reject_low 24 ALIGNMENT 0 YS2-20m08.q1k chr02 464 616 197571 197570 F 153 0.00 616 reject_low 28 ALIGNMENT 81 YS2-20m08.p1k chr14 219 136 602312 602395 C 84 98.81 588 reject_low 8 ALIGNMENT 0 YS2-20m08.q1k chr14 387 62 569943 569942 C 326 0.00 616 reject_low 4 ALIGNMENT 0 YS2-20m08.q1k chr12 464 616 734878 734877 F 153 0.00 616 reject_low 22 ALIGNMENT 81 YS2-20m08.p1k chr14 136 219 569859 569942 F 84 98.81 588 reject_low 7 ALIGNMENT 76 YS2-20m08.p1k chr05 135 218 551271 551353 F 84 97.62 588 reject_low 12 ALIGNMENT 39 YS2-20m08.q1k vc_5 616 578 5025 5063 C 39 100.00 616 reject_low 31 ALIGNMENT 0 YS2-20m08.q1k chr12 616 472 1052060 1052059 C 145 0.00 616 reject_low 9 ALIGNMENT 81 YS2-20m08.q1k chr14 471 388 569859 569942 C 84 98.81 616 reject_low 4 ALIGNMENT 0 YS2-20m08.p1k chr04 220 588 668076 668075 F 369 0.00 588 reject_low 19 ALIGNMENT 40 YS2-20m08.q1k vc_1 616 577 2472 2511 C 40 100.00 616 reject_low 15 ALIGNMENT 0 YS2-20m08.p1k chr02 588 219 197498 197497 C 370 0.00 588 reject_low 27 ALIGNMENT 76 YS2-20m08.q1k chr05 472 389 551271 551353 C 84 97.62 616 reject_low 11 ALIGNMENT 0 YS2-20m08.p1k chr09 588 236 210646 210645 C 353 0.00 588 accept_trans 0 ALIGNMENT 40 YS2-20m08.q1k vc_2 616 577 2105 2144 C 40 100.00 616 reject_low 16 ALIGNMENT 0 YS2-20m08.q1k chr07 62 388 739127 739126 F 327 0.00 616 reject_low 30 ALIGNMENT 0 YS2-20m08.q1k chr04 387 62 668077 668076 C 326 0.00 616 reject_low 20 ALIGNMENT 0 YS2-20m08.q1k vc_4 62 576 5832 5831 F 515 0.00 616 reject_low 18 ALIGNMENT 0 YS2-20m09.q1k vc_2 166 62 2146 2145 C 105 0.00 207 reject_low 9 ALIGNMENT 41 YS2-20m09.q1k vc_2 207 167 2105 2145 C 41 100.00 207 reject_low 9 ALIGNMENT 485 YS2-20m09.p1k vc_6 1 677 3712 4383 F 677 91.43 810 reject_vc 2 ALIGNMENT 486 YS2-20m09.p1k vc_5 677 1 3998 4669 C 677 91.29 810 reject_vc 1 ALIGNMENT 0 YS2-20m09.q1k vc_7 62 169 13525 13524 F 108 0.00 207 reject_low 13 ALIGNMENT 41 YS2-20m09.q1k vc_1 207 167 2472 2512 C 41 100.00 207 reject_low 8 ALIGNMENT 123 YS2-20m09.q1k chr07 167 38 761063 761192 C 130 98.46 207 accept 0 ALIGNMENT 483 YS2-20m09.p1k vc_1 677 1 1078 1749 C 677 91.14 810 reject_vc 3 ALIGNMENT 41 YS2-20m09.q1k vc_4 167 207 5831 5871 F 41 100.00 207 reject_low 11 ALIGNMENT 476 YS2-20m09.p1k vc_7 1 677 13918 14589 F 677 90.99 810 reject_vc 7 ALIGNMENT 36 YS2-20m09.q1k vc_5 204 169 1 36 C 36 100.00 207 reject_low 14 ALIGNMENT 0 YS2-20m09.q1k chr07 207 168 761064 761063 C 40 0.00 207 accept 0 ALIGNMENT 41 YS2-20m09.q1k vc_3 207 167 2472 2512 C 41 100.00 207 reject_low 10 ALIGNMENT 0 YS2-20m09.q1k vc_5 168 62 5064 5063 C 107 0.00 207 reject_low 12 ALIGNMENT 39 YS2-20m09.q1k vc_5 207 169 5025 5063 C 39 100.00 207 reject_low 12 ALIGNMENT 0 YS2-20m09.q1k vc_1 166 62 2513 2512 C 105 0.00 207 reject_low 8 ALIGNMENT 38 YS2-20m09.q1k vc_7 170 207 13525 13562 F 38 100.00 207 reject_low 13 ALIGNMENT 0 YS2-20m09.q1k vc_3 166 62 2513 2512 C 105 0.00 207 reject_low 10 ALIGNMENT 0 YS2-20m09.q1k vc_4 62 166 5831 5830 F 105 0.00 207 reject_low 11 ALIGNMENT 483 YS2-20m09.p1k vc_2 677 1 1078 1749 C 677 91.14 810 reject_vc 4 ALIGNMENT 0 YS2-20m09.q1k vc_5 168 62 37 36 C 107 0.00 207 reject_low 14 ALIGNMENT 483 YS2-20m09.p1k vc_3 677 1 1078 1749 C 677 91.14 810 reject_vc 5 ALIGNMENT 476 YS2-20m09.p1k vc_7 1 677 456 1127 F 677 90.99 810 reject_vc 6 ALIGNMENT 41 YS2-20m10.q1k vc_2 206 166 2105 2145 C 41 100.00 206 reject_low 2 ALIGNMENT 41 YS2-20m10.q1k vc_1 206 166 2472 2512 C 41 100.00 206 reject_low 1 ALIGNMENT 41 YS2-20m10.q1k vc_3 206 166 2472 2512 C 41 100.00 206 reject_low 3 ALIGNMENT 0 YS2-20m10.q1k chr07 206 167 761064 761063 C 40 0.00 206 accept 0 ALIGNMENT 0 YS2-20m10.q1k vc_2 165 62 2146 2145 C 104 0.00 206 reject_low 2 ALIGNMENT 0 YS2-20m10.q1k vc_7 62 168 13525 13524 F 107 0.00 206 reject_low 6 ALIGNMENT 36 YS2-20m10.q1k vc_5 203 168 1 36 C 36 100.00 206 reject_low 7 ALIGNMENT 38 YS2-20m10.q1k vc_7 169 206 13525 13562 F 38 100.00 206 reject_low 6 ALIGNMENT 41 YS2-20m10.q1k vc_4 166 206 5831 5871 F 41 100.00 206 reject_low 4 ALIGNMENT 129 YS2-20m10.q1k chr07 166 37 761063 761192 C 130 100.00 206 accept 0 ALIGNMENT 0 YS2-20m10.q1k vc_5 167 62 5064 5063 C 106 0.00 206 reject_low 5 ALIGNMENT 0 YS2-20m10.q1k vc_3 165 62 2513 2512 C 104 0.00 206 reject_low 3 ALIGNMENT 0 YS2-20m10.q1k vc_1 165 62 2513 2512 C 104 0.00 206 reject_low 1 ALIGNMENT 0 YS2-20m10.q1k vc_4 62 165 5831 5830 F 104 0.00 206 reject_low 4 ALIGNMENT 39 YS2-20m10.q1k vc_5 206 168 5025 5063 C 39 100.00 206 reject_low 5 ALIGNMENT 0 YS2-20m10.q1k vc_5 167 62 37 36 C 106 0.00 206 reject_low 7 ALIGNMENT 943 YS2-20m11.p1k chr05 30 1125 67940 69044 F 1096 95.71 1290 accept 0 ALIGNMENT 951 YS2-20m11.q1k chr05 1136 49 71160 72261 C 1088 97.33 1149 accept 0 ALIGNMENT 999 YS2-20m12.p1k chr12 38 1202 457118 458294 F 1165 95.79 1365 accept 0 ALIGNMENT 943 YS2-20m12.q1k chr12 1118 42 460885 461974 C 1077 96.38 1196 accept 0 ALIGNMENT 999 YS2-20m12.p1k chr12 38 1202 466255 467431 F 1165 95.79 1365 reject_low 1 ALIGNMENT 0 YS2-20m12.q1k chr12 303 62 490544 490543 C 242 0.00 1196 reject_low 3 ALIGNMENT 654 YS2-20m12.q1k chr12 1059 304 489781 490543 C 756 95.90 1196 reject_low 3 ALIGNMENT 943 YS2-20m12.q1k chr12 1118 42 451748 452837 C 1077 96.38 1196 reject_low 2 ALIGNMENT 860 YS2-20m13.q1k chr15 1139 46 565677 566762 C 1094 94.52 1177 accept 0 ALIGNMENT 997 YS2-20m13.p1k chr15 34 1194 560681 561859 F 1161 96.47 1284 accept 0 ALIGNMENT 947 YS2-20m15.q1k chr12 45 1056 460922 461940 F 1012 98.22 1207 accept 1 ALIGNMENT 1055 YS2-20m15.p1k chr12 1245 32 461532 462748 C 1214 95.96 1275 accept 1 ALIGNMENT 947 YS2-20m15.q1k chr12 45 1056 451785 452803 F 1012 98.22 1207 accept 0 ALIGNMENT 0 YS2-20m15.q1k chr12 836 867 490543 490542 F 32 0.00 1207 reject_low 2 ALIGNMENT 1055 YS2-20m15.p1k chr12 1245 32 452395 453611 C 1214 95.96 1275 accept 0 ALIGNMENT 761 YS2-20m15.q1k chr12 46 835 489754 490543 F 790 98.99 1207 reject_low 2 ALIGNMENT 936 YS2-20m16.q1k chr14 1111 46 684569 685642 C 1066 96.44 1268 accept 0 ALIGNMENT 1040 YS2-20m16.p1k chr14 30 1248 683923 685159 F 1219 96.31 1266 accept 0 ALIGNMENT 38 YS2-20m17.q1k vc_7 199 236 13525 13562 F 38 100.00 236 reject_low 6 ALIGNMENT 0 YS2-20m17.q1k vc_5 197 62 37 36 C 136 0.00 236 reject_low 7 ALIGNMENT 0 YS2-20m17.q1k vc_3 194 62 2514 2513 C 133 0.00 236 reject_low 3 ALIGNMENT 0 YS2-20m17.q1k vc_1 194 62 2514 2513 C 133 0.00 236 reject_low 2 ALIGNMENT 144 YS2-20m17.p1k chr09 31 190 64584 64743 F 160 98.75 208 accept_chi 1 ALIGNMENT 151 YS2-20m17.q1k chr09 196 37 64584 64743 C 160 99.38 236 accept_chi 0 ALIGNMENT 42 YS2-20m17.q1k vc_4 195 236 5830 5871 F 42 100.00 236 reject_low 4 ALIGNMENT 42 YS2-20m17.q1k vc_1 236 195 2472 2513 C 42 100.00 236 reject_low 2 ALIGNMENT 0 YS2-20m17.q1k vc_5 197 62 5064 5063 C 136 0.00 236 reject_low 5 ALIGNMENT 39 YS2-20m17.q1k vc_5 236 198 5025 5063 C 39 100.00 236 reject_low 5 ALIGNMENT 0 YS2-20m17.q1k vc_7 62 198 13525 13524 F 137 0.00 236 reject_low 6 ALIGNMENT 36 YS2-20m17.q1k vc_5 233 198 1 36 C 36 100.00 236 reject_low 7 ALIGNMENT 0 YS2-20m17.p1k chr09 191 208 64743 64742 F 18 0.00 208 accept_chi 1 ALIGNMENT 0 YS2-20m17.q1k vc_4 62 194 5830 5829 F 133 0.00 236 reject_low 4 ALIGNMENT 0 YS2-20m17.q1k chr09 236 197 64585 64584 C 40 0.00 236 accept_chi 0 ALIGNMENT 42 YS2-20m17.q1k vc_3 236 195 2472 2513 C 42 100.00 236 reject_low 3 ALIGNMENT 43 YS2-20m18.p1k chr05 40 135 1661 1756 F 96 82.29 1322 reject_low 122 ALIGNMENT 81 YS2-20m18.p1k chr12 135 32 1076403 1076506 C 104 93.27 1322 reject_low 19 ALIGNMENT 0 YS2-20m18.p1k chr08 862 126 560746 560745 C 737 0.00 1322 reject_low 114 ALIGNMENT 0 YS2-20m18.p1k chr16 862 136 946101 946100 C 727 0.00 1322 reject_low 30 ALIGNMENT 0 YS2-20m18.p1k chr12 136 862 7612 7611 F 727 0.00 1322 reject_low 24 ALIGNMENT 49 YS2-20m18.p1k chr16 125 31 946146 946240 C 95 84.21 1322 reject_low 96 ALIGNMENT 49 YS2-20m18.p1k chr14 31 125 1684 1778 F 95 84.21 1322 reject_low 90 ALIGNMENT 60 YS2-20m18.p1k chr12 32 135 1686 1789 F 104 86.54 1322 reject_low 44 ALIGNMENT 51 YS2-20m18.p1k chr12 32 135 1794 1897 F 104 83.65 1322 reject_low 68 ALIGNMENT 0 YS2-20m18.p1k chr05 126 862 1638 1637 F 737 0.00 1322 reject_low 73 ALIGNMENT 43 YS2-20m18.p1k chr13 40 125 1714 1799 F 86 83.72 1322 reject_low 146 ALIGNMENT 81 YS2-20m18.p1k chr16 32 135 1666 1769 F 104 93.27 1322 reject_low 29 ALIGNMENT 34 YS2-20m18.p1k chr05 125 40 575149 575234 C 86 80.23 1322 reject_low 172 ALIGNMENT 0 YS2-20m18.p1k chr09 62 99 1685 1684 F 38 0.00 1322 reject_low 201 ALIGNMENT 25 YS2-20m18.p1k chr12 135 100 1069992 1070027 C 36 91.67 1322 reject_low 190 ALIGNMENT 0 YS2-20m18.p1k chr02 136 862 2168 2167 F 727 0.00 1322 reject_low 109 ALIGNMENT 0 YS2-20m18.p1k chr04 99 62 1530490 1530489 C 38 0.00 1322 reject_low 184 ALIGNMENT 51 YS2-20m18.p1k chr09 32 125 2085 2178 F 94 85.11 1322 reject_low 102 ALIGNMENT 81 YS2-20m18.p1k chr05 135 32 575031 575134 C 104 93.27 1322 reject_low 21 ALIGNMENT 0 YS2-20m18.p1k chr02 136 862 2096 2095 F 727 0.00 1322 reject_low 155 ALIGNMENT 0 YS2-20m18.p1k chr05 862 126 575222 575221 C 737 0.00 1322 reject_low 113 ALIGNMENT 25 YS2-20m18.p1k chr05 135 100 575283 575318 C 36 91.67 1322 reject_low 185 ALIGNMENT 43 YS2-20m18.p1k chr12 125 40 1076557 1076642 C 86 83.72 1322 reject_low 145 ALIGNMENT 0 YS2-20m18.p1k chr05 126 862 1782 1781 F 737 0.00 1322 reject_low 129 ALIGNMENT 986 YS2-20m18.p1k chr12 40 1252 7661 8870 F 1213 94.81 1322 ambiguous_tel 5 ALIGNMENT 0 YS2-20m18.p1k chr05 136 862 1828 1827 F 727 0.00 1322 reject_low 55 ALIGNMENT 43 YS2-20m18.p1k chr07 125 40 1089262 1089347 C 86 83.72 1322 reject_low 139 ALIGNMENT 986 YS2-20m18.p1k chr16 1252 40 944842 946051 C 1213 94.81 1322 ambiguous_tel 6 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1069895 1069894 C 737 0.00 1322 reject_low 144 ALIGNMENT 0 YS2-20m18.p1k chr02 126 862 1870 1869 F 737 0.00 1322 reject_low 34 ALIGNMENT 48 YS2-20m18.p1k chr09 32 125 2049 2142 F 94 84.04 1322 reject_low 108 ALIGNMENT 43 YS2-20m18.p1k chr16 40 125 1530 1615 F 86 83.72 1322 reject_low 151 ALIGNMENT 0 YS2-20m18.p1k chr08 862 126 560530 560529 C 737 0.00 1322 reject_low 125 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 2031 2030 F 737 0.00 1322 reject_low 81 ALIGNMENT 54 YS2-20m18.p1k chr05 32 125 1545 1638 F 94 86.17 1322 reject_low 73 ALIGNMENT 991 YS2-20m18.q1k chr09 1187 37 2600 3739 C 1151 96.18 1237 reject_low 15 ALIGNMENT 51 YS2-20m18.p1k chr16 125 32 946182 946275 C 94 85.11 1322 reject_low 104 ALIGNMENT 49 YS2-20m18.p1k chr07 125 31 1089154 1089248 C 95 84.21 1322 reject_low 78 ALIGNMENT 0 YS2-20m18.p1k chr02 126 862 2338 2337 F 737 0.00 1322 reject_low 99 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 7458 7457 F 737 0.00 1322 reject_low 142 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 2139 2138 F 737 0.00 1322 reject_low 141 ALIGNMENT 81 YS2-20m18.p1k chr04 135 32 1530202 1530305 C 104 93.27 1322 reject_low 20 ALIGNMENT 0 YS2-20m18.p1k chr05 136 862 1756 1755 F 727 0.00 1322 reject_low 122 ALIGNMENT 43 YS2-20m18.p1k chr05 40 125 1805 1890 F 86 83.72 1322 reject_low 134 ALIGNMENT 81 YS2-20m18.p1k chr13 32 135 1850 1953 F 104 93.27 1322 reject_low 26 ALIGNMENT 0 YS2-20m18.p1k chr14 126 862 1922 1921 F 737 0.00 1322 reject_low 149 ALIGNMENT 40 YS2-20m18.p1k chr12 125 40 1076341 1076426 C 86 82.56 1322 reject_low 158 ALIGNMENT 45 YS2-20m18.p1k chr12 40 127 1730 1817 F 88 84.09 1322 reject_low 127 ALIGNMENT 34 YS2-20m18.p1k chr09 33 109 2302 2378 F 77 81.82 1322 reject_low 164 ALIGNMENT 34 YS2-20m18.p1k chr16 40 125 1566 1651 F 86 80.23 1322 reject_low 181 ALIGNMENT 49 YS2-20m18.p1k chr13 31 125 1777 1871 F 95 84.21 1322 reject_low 88 ALIGNMENT 0 YS2-20m18.p1k chr12 62 99 1682 1681 F 38 0.00 1322 reject_low 188 ALIGNMENT 973 YS2-20m18.q1k chr16 1187 37 2121 3260 C 1151 95.66 1237 ambiguous_tel 3 ALIGNMENT 46 YS2-20m18.p1k chr02 31 125 1704 1798 F 95 83.16 1322 reject_low 106 ALIGNMENT 70 YS2-20m18.p1k chr07 125 40 1089082 1089167 C 86 94.19 1322 reject_low 47 ALIGNMENT 0 YS2-20m18.p1k chr16 862 128 946361 946360 C 735 0.00 1322 reject_low 128 ALIGNMENT 0 YS2-20m18.p1k chr08 136 862 1721 1720 F 727 0.00 1322 reject_low 182 ALIGNMENT 986 YS2-20m18.p1k chr04 1252 40 1528944 1530153 C 1213 94.81 1322 ambiguous_tel 7 ALIGNMENT 973 YS2-20m18.q1k chr07 37 1187 1087617 1088756 F 1151 95.66 1237 ambiguous_tel 1 ALIGNMENT 52 YS2-20m18.p1k chr12 31 125 1901 1995 F 95 85.26 1322 reject_low 65 ALIGNMENT 45 YS2-20m18.p1k chr12 125 32 1076593 1076686 C 94 82.98 1322 reject_low 117 ALIGNMENT 0 YS2-20m18.p1k chr16 62 99 1482 1481 F 38 0.00 1322 reject_low 195 ALIGNMENT 49 YS2-20m18.p1k chr12 31 125 1937 2031 F 95 84.21 1322 reject_low 81 ALIGNMENT 0 YS2-20m18.p1k chr09 126 862 1998 1997 F 737 0.00 1322 reject_low 41 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 7494 7493 F 737 0.00 1322 reject_low 175 ALIGNMENT 43 YS2-20m18.p1k chr02 40 125 1533 1618 F 86 83.72 1322 reject_low 131 ALIGNMENT 25 YS2-20m18.p1k chr08 135 100 560807 560842 C 36 91.67 1322 reject_low 187 ALIGNMENT 0 YS2-20m18.p1k chr14 126 862 1778 1777 F 737 0.00 1322 reject_low 90 ALIGNMENT 0 YS2-20m18.p1k chr12 136 862 1717 1716 F 727 0.00 1322 reject_low 188 ALIGNMENT 0 YS2-20m18.p1k chr06 110 862 1261 1260 F 753 0.00 1322 reject_low 163 ALIGNMENT 43 YS2-20m18.p1k chr06 64 125 892 953 F 62 90.32 1322 reject_low 154 ALIGNMENT 70 YS2-20m18.p1k chr13 40 125 1894 1979 F 86 94.19 1322 reject_low 50 ALIGNMENT 0 YS2-20m18.p1k chr12 136 862 1789 1788 F 727 0.00 1322 reject_low 44 ALIGNMENT 70 YS2-20m18.p1k chr12 40 125 7553 7638 F 86 94.19 1322 reject_low 49 ALIGNMENT 0 YS2-20m18.p1k chr16 136 862 1517 1516 F 727 0.00 1322 reject_low 195 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 1923 1922 F 737 0.00 1322 reject_low 40 ALIGNMENT 0 YS2-20m18.p1k chr09 126 862 1710 1709 F 737 0.00 1322 reject_low 201 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1069931 1069930 C 737 0.00 1322 reject_low 116 ALIGNMENT 0 YS2-20m18.p1k chr02 136 862 1916 1915 F 727 0.00 1322 reject_low 37 ALIGNMENT 973 YS2-20m18.q1k chr04 37 1187 1528711 1529850 F 1151 95.66 1237 ambiguous_tel 7 ALIGNMENT 0 YS2-20m18.p1k chr02 128 862 2016 2015 F 735 0.00 1322 reject_low 107 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1069859 1069858 C 737 0.00 1322 reject_low 176 ALIGNMENT 0 YS2-20m18.p1k chr08 862 136 560592 560591 C 727 0.00 1322 reject_low 61 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 7638 7637 F 737 0.00 1322 reject_low 49 ALIGNMENT 34 YS2-20m18.p1k chr10 33 109 2285 2361 F 77 81.82 1322 reject_low 165 ALIGNMENT 0 YS2-20m18.p1k chr04 862 126 1530393 1530392 C 737 0.00 1322 reject_low 112 ALIGNMENT 0 YS2-20m18.p1k chr16 99 62 946496 946495 C 38 0.00 1322 reject_low 196 ALIGNMENT 0 YS2-20m18.p1k chr02 126 862 2050 2049 F 737 0.00 1322 reject_low 166 ALIGNMENT 49 YS2-20m18.p1k chr14 31 125 1720 1814 F 95 84.21 1322 reject_low 91 ALIGNMENT 49 YS2-20m18.p1k chr15 125 31 1089449 1089543 C 95 84.21 1322 reject_low 93 ALIGNMENT 76 YS2-20m18.p1k chr02 32 127 2173 2268 F 96 93.75 1322 reject_low 35 ALIGNMENT 0 YS2-20m18.p1k chr15 862 126 1089450 1089449 C 737 0.00 1322 reject_low 93 ALIGNMENT 0 YS2-20m18.p1k chr12 862 136 1069993 1069992 C 727 0.00 1322 reject_low 190 ALIGNMENT 976 YS2-20m18.q1k chr12 1187 37 7964 9103 C 1151 95.74 1237 ambiguous_tel 5 ALIGNMENT 0 YS2-20m18.p1k chr12 136 862 1897 1896 F 727 0.00 1322 reject_low 68 ALIGNMENT 0 YS2-20m18.p1k chr14 126 862 1670 1669 F 737 0.00 1322 reject_low 119 ALIGNMENT 0 YS2-20m18.p1k chr09 133 132 2222 2377 F 0 0.00 1322 reject_low 15 ALIGNMENT 0 YS2-20m18.p1k chr05 133 132 1934 2053 F 0 0.00 1322 reject_low 17 ALIGNMENT 0 YS2-20m18.p1k chr08 862 126 560494 560493 C 737 0.00 1322 reject_low 101 ALIGNMENT 43 YS2-20m18.p1k chr16 125 40 946038 946123 C 86 83.72 1322 reject_low 153 ALIGNMENT 40 YS2-20m18.p1k chr12 125 40 1069678 1069763 C 86 82.56 1322 reject_low 157 ALIGNMENT 49 YS2-20m18.p1k chr13 31 125 1813 1907 F 95 84.21 1322 reject_low 89 ALIGNMENT 43 YS2-20m18.p1k chr05 125 40 574969 575054 C 86 83.72 1322 reject_low 135 ALIGNMENT 51 YS2-20m18.p1k chr16 125 32 946326 946419 C 94 85.11 1322 reject_low 105 ALIGNMENT 25 YS2-20m18.p1k chr15 135 100 1089619 1089654 C 36 91.67 1322 reject_low 194 ALIGNMENT 51 YS2-20m18.p1k chr16 135 32 946280 946383 C 104 83.65 1322 reject_low 69 ALIGNMENT 49 YS2-20m18.p1k chr09 40 135 2021 2116 F 96 84.38 1322 reject_low 98 ALIGNMENT 0 YS2-20m18.p1k chr05 110 862 2054 2053 F 753 0.00 1322 reject_low 162 ALIGNMENT 25 YS2-20m18.p1k chr13 100 135 1666 1701 F 36 91.67 1322 reject_low 192 ALIGNMENT 975 YS2-20m18.p1k chr08 1252 40 559295 560506 C 1213 94.56 1322 ambiguous_tel 13 ALIGNMENT 0 YS2-20m18.p1k chr16 126 862 1615 1614 F 737 0.00 1322 reject_low 151 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1076486 1076485 C 737 0.00 1322 reject_low 87 ALIGNMENT 81 YS2-20m18.p1k chr15 135 32 1089367 1089470 C 104 93.27 1322 reject_low 28 ALIGNMENT 973 YS2-20m18.q1k chr05 37 1187 573540 574679 F 1151 95.66 1237 ambiguous_tel 0 ALIGNMENT 976 YS2-20m18.q1k chr16 37 1187 944609 945748 F 1151 95.74 1237 ambiguous_tel 6 ALIGNMENT 42 YS2-20m18.p1k chr10 58 145 2166 2253 F 88 82.95 1322|0,8 reject_low 16 ALIGNMENT 0 YS2-20m18.p1k chr08 862 126 560674 560673 C 737 0.00 1322 reject_low 174 ALIGNMENT 0 YS2-20m18.p1k chr07 862 136 1089109 1089108 C 727 0.00 1322 reject_low 22 ALIGNMENT 42 YS2-20m18.p1k chr05 32 125 1689 1782 F 94 81.91 1322 reject_low 129 ALIGNMENT 45 YS2-20m18.p1k chr12 32 125 7329 7422 F 94 82.98 1322 reject_low 115 ALIGNMENT 67 YS2-20m18.p1k chr15 125 40 1089341 1089426 C 86 93.02 1322 reject_low 59 ALIGNMENT 54 YS2-20m18.p1k chr09 32 135 1869 1972 F 104 84.62 1322 reject_low 63 ALIGNMENT 0 YS2-20m18.p1k chr07 862 126 1089083 1089082 C 737 0.00 1322 reject_low 47 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1076450 1076449 C 737 0.00 1322 reject_low 86 ALIGNMENT 986 YS2-20m18.p1k chr15 1252 40 1088109 1089318 C 1213 94.81 1322 ambiguous_tel 10 ALIGNMENT 0 YS2-20m18.p1k chr05 862 136 575032 575031 C 727 0.00 1322 reject_low 21 ALIGNMENT 78 YS2-20m18.p1k chr02 32 125 2101 2194 F 94 94.68 1322 reject_low 33 ALIGNMENT 973 YS2-20m18.q1k chr12 37 1187 1068249 1069388 F 1151 95.66 1237 ambiguous_tel 8,9 ALIGNMENT 0 YS2-20m18.p1k chr13 126 862 1835 1834 F 737 0.00 1322 reject_low 178 ALIGNMENT 49 YS2-20m18.p1k chr12 31 125 7472 7566 F 95 84.21 1322 reject_low 83 ALIGNMENT 43 YS2-20m18.p1k chr13 40 125 1930 2015 F 86 83.72 1322 reject_low 147 ALIGNMENT 49 YS2-20m18.p1k chr12 125 31 1076449 1076543 C 95 84.21 1322 reject_low 86 ALIGNMENT 0 YS2-20m18.p1k chr09 136 862 1792 1791 F 727 0.00 1322 reject_low 66 ALIGNMENT 84 YS2-20m18.p1k chr06 32 135 1004 1107 F 104 94.23 1322|0,3 reject_low 18 ALIGNMENT 70 YS2-20m18.p1k chr06 40 135 904 999 F 96 91.67 1322 reject_low 39 ALIGNMENT 0 YS2-20m18.p1k chr08 126 862 1855 1854 F 737 0.00 1322 reject_low 42 ALIGNMENT 43 YS2-20m18.p1k chr14 40 125 1621 1706 F 86 83.72 1322 reject_low 148 ALIGNMENT 0 YS2-20m18.p1k chr06 126 862 1025 1024 F 737 0.00 1322 reject_low 62 ALIGNMENT 0 YS2-20m18.p1k chr02 128 862 1692 1691 F 735 0.00 1322 reject_low 71 ALIGNMENT 42 YS2-20m18.p1k chr09 32 125 1833 1926 F 94 81.91 1322 reject_low 130 ALIGNMENT 35 YS2-20m18.p1k chr02 76 135 2037 2096 F 60 86.67 1322 reject_low 155 ALIGNMENT 0 YS2-20m18.p1k chr08 862 126 560710 560709 C 737 0.00 1322 reject_low 140 ALIGNMENT 34 YS2-20m18.p1k chr12 125 40 1076521 1076606 C 86 80.23 1322 reject_low 177 ALIGNMENT 0 YS2-20m18.p1k chr04 862 126 1530321 1530320 C 737 0.00 1322 reject_low 169 ALIGNMENT 0 YS2-20m18.p1k chr02 126 862 2194 2193 F 737 0.00 1322 reject_low 33 ALIGNMENT 43 YS2-20m18.p1k chr08 125 40 560709 560794 C 86 83.72 1322 reject_low 140 ALIGNMENT 0 YS2-20m18.p1k chr09 136 862 2080 2079 F 727 0.00 1322 reject_low 31 ALIGNMENT 0 YS2-20m18.p1k chr16 862 136 946281 946280 C 727 0.00 1322 reject_low 69 ALIGNMENT 0 YS2-20m18.p1k chr05 862 126 574970 574969 C 737 0.00 1322 reject_low 135 ALIGNMENT 22 YS2-20m18.p1k chr09 100 125 1685 1710 F 26 96.15 1322 reject_low 201 ALIGNMENT 0 YS2-20m18.p1k chr13 126 862 1871 1870 F 737 0.00 1322 reject_low 88 ALIGNMENT 43 YS2-20m18.p1k chr12 125 40 1069894 1069979 C 86 83.72 1322 reject_low 144 ALIGNMENT 54 YS2-20m18.p1k chr02 32 125 1741 1834 F 94 86.17 1322 reject_low 72 ALIGNMENT 0 YS2-20m18.p1k chr12 862 136 1076404 1076403 C 727 0.00 1322 reject_low 19 ALIGNMENT 976 YS2-20m18.p1k chr08 40 1252 1842 3067 F 1213 94.15 1322 ambiguous_tel 14 ALIGNMENT 34 YS2-20m18.p1k chr07 125 40 1089226 1089311 C 86 80.23 1322 reject_low 173 ALIGNMENT 0 YS2-20m18.p1k chr09 126 862 2142 2141 F 737 0.00 1322 reject_low 108 ALIGNMENT 70 YS2-20m18.p1k chr12 40 125 2018 2103 F 86 94.19 1322 reject_low 48 ALIGNMENT 34 YS2-20m18.p1k chr05 40 125 1517 1602 F 86 80.23 1322 reject_low 170 ALIGNMENT 67 YS2-20m18.p1k chr12 125 40 1076377 1076462 C 86 93.02 1322 reject_low 58 ALIGNMENT 0 YS2-20m18.p1k chr05 99 62 575319 575318 C 38 0.00 1322 reject_low 185 ALIGNMENT 49 YS2-20m18.p1k chr08 125 31 560637 560731 C 95 84.21 1322 reject_low 80 ALIGNMENT 0 YS2-20m18.p1k chr08 99 62 560843 560842 C 38 0.00 1322 reject_low 187 ALIGNMENT 84 YS2-20m18.p1k chr09 32 135 2121 2224 F 104 94.23 1322|0,3 reject_low 15 ALIGNMENT 0 YS2-20m18.p1k chr16 862 126 946183 946182 C 737 0.00 1322 reject_low 104 ALIGNMENT 63 YS2-20m18.p1k chr02 32 125 1633 1726 F 94 89.36 1322 reject_low 54 ALIGNMENT 972 YS2-20m18.q1k chr13 1187 37 2305 3444 C 1151 95.66 1237 ambiguous_tel 11 ALIGNMENT 0 YS2-20m18.p1k chr04 862 136 1530203 1530202 C 727 0.00 1322 reject_low 20 ALIGNMENT 0 YS2-20m18.p1k chr16 126 862 1723 1722 F 737 0.00 1322 reject_low 95 ALIGNMENT 0 YS2-20m18.p1k chr08 136 862 1685 1684 F 727 0.00 1322 reject_low 186 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1076522 1076521 C 737 0.00 1322 reject_low 177 ALIGNMENT 0 YS2-20m18.p1k chr02 126 862 1618 1617 F 737 0.00 1322 reject_low 131 ALIGNMENT 0 YS2-20m18.p1k chr15 862 136 1089368 1089367 C 727 0.00 1322 reject_low 28 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 7566 7565 F 737 0.00 1322 reject_low 83 ALIGNMENT 0 YS2-20m18.p1k chr02 136 862 2240 2239 F 727 0.00 1322 reject_low 110 ALIGNMENT 49 YS2-20m18.p1k chr12 125 31 1069822 1069916 C 95 84.21 1322 reject_low 85 ALIGNMENT 46 YS2-20m18.p1k chr02 40 135 2073 2168 F 96 83.33 1322 reject_low 109 ALIGNMENT 25 YS2-20m18.p1k chr02 100 135 1485 1520 F 36 91.67 1322 reject_low 183 ALIGNMENT 81 YS2-20m18.p1k chr12 32 135 1974 2077 F 104 93.27 1322 reject_low 23 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1076342 1076341 C 737 0.00 1322 reject_low 158 ALIGNMENT 0 YS2-20m18.p1k chr13 126 862 2015 2014 F 737 0.00 1322 reject_low 147 ALIGNMENT 0 YS2-20m18.p1k chr09 126 862 1926 1925 F 737 0.00 1322 reject_low 130 ALIGNMENT 43 YS2-20m18.p1k chr07 125 40 1089046 1089131 C 86 83.72 1322 reject_low 138 ALIGNMENT 0 YS2-20m18.p1k chr13 126 862 1799 1798 F 737 0.00 1322 reject_low 146 ALIGNMENT 0 YS2-20m18.p1k chr02 62 99 1485 1484 F 38 0.00 1322 reject_low 183 ALIGNMENT 0 YS2-20m18.p1k chr16 862 126 946075 946074 C 737 0.00 1322 reject_low 53 ALIGNMENT 29 YS2-20m18.p1k chr08 76 135 1662 1721 F 60 83.33 1322 reject_low 182 ALIGNMENT 70 YS2-20m18.p1k chr05 34 125 1763 1854 F 92 92.39 1322 reject_low 43 ALIGNMENT 0 YS2-20m18.p1k chr12 99 62 1076691 1076690 C 38 0.00 1322 reject_low 191 ALIGNMENT 0 YS2-20m18.p1k chr09 121 862 1741 1740 F 742 0.00 1322 reject_low 197 ALIGNMENT 0 YS2-20m18.p1k chr15 862 136 1089620 1089619 C 727 0.00 1322 reject_low 194 ALIGNMENT 25 YS2-20m18.p1k chr16 135 100 946460 946495 C 36 91.67 1322 reject_low 196 ALIGNMENT 0 YS2-20m18.p1k chr14 126 862 1742 1741 F 737 0.00 1322 reject_low 179 ALIGNMENT 0 YS2-20m18.p1k chr16 862 126 946255 946254 C 737 0.00 1322 reject_low 38 ALIGNMENT 973 YS2-20m18.q1k chr14 1187 37 2212 3351 C 1151 95.66 1237 ambiguous_tel 2 ALIGNMENT 0 YS2-20m18.p1k chr12 99 62 1070028 1070027 C 38 0.00 1322 reject_low 190 ALIGNMENT 0 YS2-20m18.p1k chr09 128 862 1892 1891 F 735 0.00 1322 reject_low 97 ALIGNMENT 0 YS2-20m18.p1k chr02 126 862 2302 2301 F 737 0.00 1322 reject_low 123 ALIGNMENT 0 YS2-20m18.p1k chr05 126 862 1566 1565 F 737 0.00 1322 reject_low 168 ALIGNMENT 45 YS2-20m18.p1k chr12 125 32 1069930 1070023 C 94 82.98 1322 reject_low 116 ALIGNMENT 0 YS2-20m18.p1k chr05 126 862 1890 1889 F 737 0.00 1322 reject_low 134 ALIGNMENT 25 YS2-20m18.p1k chr12 100 135 1682 1717 F 36 91.67 1322 reject_low 188 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 1995 1994 F 737 0.00 1322 reject_low 65 ALIGNMENT 0 YS2-20m18.p1k chr15 99 62 1089655 1089654 C 38 0.00 1322 reject_low 194 ALIGNMENT 81 YS2-20m18.p1k chr12 32 135 7509 7612 F 104 93.27 1322 reject_low 24 ALIGNMENT 43 YS2-20m18.p1k chr15 125 40 1089521 1089606 C 86 83.72 1322 reject_low 150 ALIGNMENT 0 YS2-20m18.p1k chr13 136 862 1953 1952 F 727 0.00 1322 reject_low 26 ALIGNMENT 0 YS2-20m18.p1k chr13 136 862 1701 1700 F 727 0.00 1322 reject_low 192 ALIGNMENT 34 YS2-20m18.p1k chr12 40 125 7409 7494 F 86 80.23 1322 reject_low 175 ALIGNMENT 986 YS2-20m18.p1k chr12 1252 40 1075145 1076354 C 1213 94.81 1322 ambiguous_tel 9 ALIGNMENT 34 YS2-20m18.p1k chr13 40 125 1750 1835 F 86 80.23 1322 reject_low 178 ALIGNMENT 79 YS2-20m18.p1k chr02 34 125 1779 1870 F 92 95.65 1322 reject_low 34 ALIGNMENT 49 YS2-20m18.p1k chr04 125 31 1530248 1530342 C 95 84.21 1322 reject_low 74 ALIGNMENT 46 YS2-20m18.p1k chr08 40 125 1698 1783 F 86 84.88 1322 reject_low 124 ALIGNMENT 0 YS2-20m18.p1k chr09 128 862 1856 1855 F 735 0.00 1322 reject_low 70 ALIGNMENT 957 YS2-20m18.p1k chr05 129 1252 2050 3182 F 1124 95.73 1322|4,0 reject_low 17 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1069787 1069786 C 737 0.00 1322 reject_low 84 ALIGNMENT 64 YS2-20m18.p1k chr06 40 125 940 1025 F 86 91.86 1322 reject_low 62 ALIGNMENT 0 YS2-20m18.p1k chr12 136 862 7360 7359 F 727 0.00 1322 reject_low 189 ALIGNMENT 46 YS2-20m18.p1k chr09 40 125 1949 2034 F 86 84.88 1322 reject_low 126 ALIGNMENT 0 YS2-20m18.p1k chr02 126 862 1582 1581 F 737 0.00 1322 reject_low 111 ALIGNMENT 0 YS2-20m18.p1k chr15 862 126 1089414 1089413 C 737 0.00 1322 reject_low 92 ALIGNMENT 67 YS2-20m18.p1k chr04 125 40 1530176 1530261 C 86 93.02 1322 reject_low 56 ALIGNMENT 43 YS2-20m18.p1k chr05 125 40 575185 575270 C 86 83.72 1322 reject_low 136 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 7674 7673 F 737 0.00 1322 reject_low 143 ALIGNMENT 0 YS2-20m18.p1k chr16 126 862 1687 1686 F 737 0.00 1322 reject_low 94 ALIGNMENT 0 YS2-20m18.p1k chr16 126 862 1579 1578 F 737 0.00 1322 reject_low 121 ALIGNMENT 0 YS2-20m18.p1k chr16 862 126 946039 946038 C 737 0.00 1322 reject_low 153 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1069823 1069822 C 737 0.00 1322 reject_low 85 ALIGNMENT 0 YS2-20m18.p1k chr06 136 862 999 998 F 727 0.00 1322 reject_low 39 ALIGNMENT 973 YS2-20m18.q1k chr15 37 1187 1087876 1089015 F 1151 95.66 1237 ambiguous_tel 10 ALIGNMENT 0 YS2-20m18.p1k chr04 862 126 1530285 1530284 C 737 0.00 1322 reject_low 75 ALIGNMENT 0 YS2-20m18.p1k chr08 128 862 1749 1748 F 735 0.00 1322 reject_low 60 ALIGNMENT 43 YS2-20m18.p1k chr12 40 125 7589 7674 F 86 83.72 1322 reject_low 143 ALIGNMENT 0 YS2-20m18.p1k chr09 136 862 1972 1971 F 727 0.00 1322 reject_low 63 ALIGNMENT 0 YS2-20m18.p1k chr05 126 862 1674 1673 F 737 0.00 1322 reject_low 171 ALIGNMENT 25 YS2-20m18.p1k chr14 100 135 1573 1608 F 36 91.67 1322 reject_low 193 ALIGNMENT 969 YS2-20m18.p1k chr10 129 1252 2357 3489 F 1124 96.09 1322|9,0 reject_low 16 ALIGNMENT 0 YS2-20m18.p1k chr15 862 126 1089522 1089521 C 737 0.00 1322 reject_low 150 ALIGNMENT 40 YS2-20m18.p1k chr04 125 40 1530140 1530225 C 86 82.56 1322 reject_low 156 ALIGNMENT 0 YS2-20m18.p1k chr07 862 126 1089191 1089190 C 737 0.00 1322 reject_low 79 ALIGNMENT 45 YS2-20m18.p1k chr08 125 32 560745 560838 C 94 82.98 1322 reject_low 114 ALIGNMENT 75 YS2-20m18.p1k chr16 125 32 946254 946347 C 94 93.62 1322 reject_low 38 ALIGNMENT 34 YS2-20m18.p1k chr15 125 40 1089485 1089570 C 86 80.23 1322 reject_low 180 ALIGNMENT 0 YS2-20m18.p1k chr13 126 862 1979 1978 F 737 0.00 1322 reject_low 50 ALIGNMENT 78 YS2-20m18.p1k chr09 32 135 1977 2080 F 104 92.31 1322 reject_low 31 ALIGNMENT 25 YS2-20m18.p1k chr04 135 100 1530454 1530489 C 36 91.67 1322 reject_low 184 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1076558 1076557 C 737 0.00 1322 reject_low 145 ALIGNMENT 0 YS2-20m18.p1k chr16 862 136 946461 946460 C 727 0.00 1322 reject_low 196 ALIGNMENT 0 YS2-20m18.p1k chr05 862 126 575186 575185 C 737 0.00 1322 reject_low 136 ALIGNMENT 0 YS2-20m18.p1k chr07 862 126 1089047 1089046 C 737 0.00 1322 reject_low 138 ALIGNMENT 0 YS2-20m18.p1k chr08 126 862 1783 1782 F 737 0.00 1322 reject_low 124 ALIGNMENT 981 YS2-20m18.q1k chr05 1187 37 2276 3415 C 1151 95.92 1237 reject_low 17 ALIGNMENT 70 YS2-20m18.p1k chr05 125 40 575005 575090 C 86 94.19 1322 reject_low 46 ALIGNMENT 52 YS2-20m18.p1k chr09 32 127 1797 1892 F 96 85.42 1322 reject_low 97 ALIGNMENT 45 YS2-20m18.p1k chr13 32 125 1670 1763 F 94 82.98 1322 reject_low 118 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1069679 1069678 C 737 0.00 1322 reject_low 157 ALIGNMENT 67 YS2-20m18.p1k chr12 125 40 1069714 1069799 C 86 93.02 1322 reject_low 57 ALIGNMENT 0 YS2-20m18.p1k chr16 862 136 946389 946388 C 727 0.00 1322 reject_low 45 ALIGNMENT 72 YS2-20m18.p1k chr12 32 125 1830 1923 F 94 92.55 1322 reject_low 40 ALIGNMENT 0 YS2-20m18.p1k chr05 135 862 2007 2006 F 728 0.00 1322 reject_low 200 ALIGNMENT 0 YS2-20m18.p1k chr13 62 99 1666 1665 F 38 0.00 1322 reject_low 192 ALIGNMENT 0 YS2-20m18.p1k chr13 126 862 1907 1906 F 737 0.00 1322 reject_low 89 ALIGNMENT 0 YS2-20m18.p1k chr08 862 128 560564 560563 C 735 0.00 1322 reject_low 36 ALIGNMENT 0 YS2-20m18.p1k chr08 862 126 560638 560637 C 737 0.00 1322 reject_low 80 ALIGNMENT 45 YS2-20m18.p1k chr16 32 125 1486 1579 F 94 82.98 1322 reject_low 121 ALIGNMENT 0 YS2-20m18.p1k chr15 862 126 1089342 1089341 C 737 0.00 1322 reject_low 59 ALIGNMENT 50 YS2-20m18.p1k chr02 31 127 1596 1692 F 97 84.54 1322 reject_low 71 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 7530 7529 F 737 0.00 1322 reject_low 82 ALIGNMENT 0 YS2-20m18.p1k chr06 126 862 1061 1060 F 737 0.00 1322 reject_low 137 ALIGNMENT 0 YS2-20m18.p1k chr10 138 137 2246 2365 F 0 0.00 1322 reject_low 16 ALIGNMENT 970 YS2-20m18.q1k chr12 37 1184 1074912 1076048 F 1148 95.64 1237 reject_low 19 ALIGNMENT 43 YS2-20m18.p1k chr14 40 125 1837 1922 F 86 83.72 1322 reject_low 149 ALIGNMENT 0 YS2-20m18.p1k chr05 862 126 575150 575149 C 737 0.00 1322 reject_low 172 ALIGNMENT 0 YS2-20m18.p1k chr16 862 126 946147 946146 C 737 0.00 1322 reject_low 96 ALIGNMENT 976 YS2-20m18.q1k chr12 1187 37 2429 3568 C 1151 95.74 1237 ambiguous_tel 4 ALIGNMENT 0 YS2-20m18.p1k chr02 126 862 1726 1725 F 737 0.00 1322 reject_low 54 ALIGNMENT 26 YS2-20m18.p1k chr12 76 125 1694 1743 F 50 84.00 1322 reject_low 198 ALIGNMENT 0 YS2-20m18.p1k chr09 126 862 2178 2177 F 737 0.00 1322 reject_low 102 ALIGNMENT 45 YS2-20m18.p1k chr15 125 32 1089557 1089650 C 94 82.98 1322 reject_low 120 ALIGNMENT 37 YS2-20m18.p1k chr12 40 125 1874 1959 F 86 81.40 1322 reject_low 167 ALIGNMENT 986 YS2-20m18.p1k chr12 40 1252 2126 3335 F 1213 94.81 1322 ambiguous_tel 4 ALIGNMENT 0 YS2-20m18.p1k chr04 862 126 1530357 1530356 C 737 0.00 1322 reject_low 133 ALIGNMENT 81 YS2-20m18.p1k chr07 135 32 1089108 1089211 C 104 93.27 1322 reject_low 22 ALIGNMENT 0 YS2-20m18.p1k chr08 862 136 560808 560807 C 727 0.00 1322 reject_low 187 ALIGNMENT 70 YS2-20m18.p1k chr14 40 125 1801 1886 F 86 94.19 1322 reject_low 51 ALIGNMENT 84 YS2-20m18.p1k chr05 32 135 1833 1936 F 104 94.23 1322|0,3 reject_low 17 ALIGNMENT 49 YS2-20m18.p1k chr16 31 125 1629 1723 F 95 84.21 1322 reject_low 95 ALIGNMENT 51 YS2-20m18.p1k chr02 43 127 1932 2016 F 85 87.06 1322 reject_low 107 ALIGNMENT 45 YS2-20m18.p1k chr05 125 32 575221 575314 C 94 82.98 1322 reject_low 113 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 1743 1742 F 737 0.00 1322 reject_low 198 ALIGNMENT 0 YS2-20m18.p1k chr16 862 126 946219 946218 C 737 0.00 1322 reject_low 160 ALIGNMENT 39 YS2-20m18.p1k chr02 40 127 1677 1764 F 88 81.82 1322 reject_low 161 ALIGNMENT 43 YS2-20m18.p1k chr16 40 125 1746 1831 F 86 83.72 1322 reject_low 152 ALIGNMENT 0 YS2-20m18.p1k chr16 136 862 1769 1768 F 727 0.00 1322 reject_low 29 ALIGNMENT 0 YS2-20m18.p1k chr14 126 862 1706 1705 F 737 0.00 1322 reject_low 148 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1076594 1076593 C 737 0.00 1322 reject_low 117 ALIGNMENT 25 YS2-20m18.p1k chr12 100 135 7325 7360 F 36 91.67 1322 reject_low 189 ALIGNMENT 0 YS2-20m18.p1k chr04 862 126 1530141 1530140 C 737 0.00 1322 reject_low 156 ALIGNMENT 0 YS2-20m18.p1k chr14 136 862 1860 1859 F 727 0.00 1322 reject_low 27 ALIGNMENT 69 YS2-20m18.p1k chr08 32 125 1762 1855 F 94 91.49 1322 reject_low 42 ALIGNMENT 947 YS2-20m18.q1k chr08 1178 37 2166 3300 C 1142 95.18 1237 ambiguous_tel 14 ALIGNMENT 34 YS2-20m18.p1k chr08 125 40 560673 560758 C 86 80.23 1322 reject_low 174 ALIGNMENT 0 YS2-20m18.p1k chr04 862 136 1530455 1530454 C 727 0.00 1322 reject_low 184 ALIGNMENT 986 YS2-20m18.p1k chr12 1252 40 1068482 1069691 C 1213 94.81 1322 ambiguous_tel 8 ALIGNMENT 51 YS2-20m18.p1k chr02 32 125 2245 2338 F 94 85.11 1322 reject_low 99 ALIGNMENT 0 YS2-20m18.p1k chr12 62 99 7325 7324 F 38 0.00 1322 reject_low 189 ALIGNMENT 81 YS2-20m18.p1k chr16 135 32 946100 946203 C 104 93.27 1322 reject_low 30 ALIGNMENT 25 YS2-20m18.p1k chr16 100 135 1482 1517 F 36 91.67 1322 reject_low 195 ALIGNMENT 990 YS2-20m18.q1k chr10 1184 37 2586 3722 C 1148 96.25 1237 reject_low 16 ALIGNMENT 49 YS2-20m18.p1k chr05 125 31 575077 575171 C 95 84.21 1322 reject_low 76 ALIGNMENT 43 YS2-20m18.p1k chr12 40 125 2054 2139 F 86 83.72 1322 reject_low 141 ALIGNMENT 43 YS2-20m18.p1k chr04 125 40 1530356 1530441 C 86 83.72 1322 reject_low 133 ALIGNMENT 25 YS2-20m18.p1k chr08 100 135 1650 1685 F 36 91.67 1322 reject_low 186 ALIGNMENT 989 YS2-20m18.p1k chr07 1252 40 1087850 1089059 C 1213 94.89 1322 ambiguous_tel 1 ALIGNMENT 974 YS2-20m18.q1k chr08 37 1187 559062 560203 F 1151 95.74 1237 ambiguous_tel 13 ALIGNMENT 49 YS2-20m18.p1k chr16 31 125 1593 1687 F 95 84.21 1322 reject_low 94 ALIGNMENT 0 YS2-20m18.p1k chr04 862 126 1530177 1530176 C 737 0.00 1322 reject_low 56 ALIGNMENT 989 YS2-20m18.p1k chr14 40 1252 1909 3118 F 1213 94.89 1322 ambiguous_tel 2 ALIGNMENT 0 YS2-20m18.p1k chr09 136 862 2116 2115 F 727 0.00 1322 reject_low 98 ALIGNMENT 51 YS2-20m18.p1k chr09 32 135 1725 1828 F 104 83.65 1322 reject_low 67 ALIGNMENT 0 YS2-20m18.p1k chr14 126 862 1814 1813 F 737 0.00 1322 reject_low 91 ALIGNMENT 0 YS2-20m18.p1k chr09 136 862 1828 1827 F 727 0.00 1322 reject_low 67 ALIGNMENT 34 YS2-20m18.p1k chr06 33 109 1185 1261 F 77 81.82 1322 reject_low 163 ALIGNMENT 0 YS2-20m18.p1k chr09 110 862 2378 2377 F 753 0.00 1322 reject_low 164 ALIGNMENT 34 YS2-20m18.p1k chr05 40 125 1589 1674 F 86 80.23 1322 reject_low 171 ALIGNMENT 73 YS2-20m18.p1k chr02 40 135 1821 1916 F 96 92.71 1322 reject_low 37 ALIGNMENT 0 YS2-20m18.p1k chr02 126 862 1654 1653 F 737 0.00 1322 reject_low 132 ALIGNMENT 52 YS2-20m18.p1k chr08 135 31 560591 560695 C 105 83.81 1322 reject_low 61 ALIGNMENT 49 YS2-20m18.p1k chr04 125 31 1530284 1530378 C 95 84.21 1322 reject_low 75 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1076378 1076377 C 737 0.00 1322 reject_low 58 ALIGNMENT 49 YS2-20m18.p1k chr12 125 31 1069786 1069880 C 95 84.21 1322 reject_low 84 ALIGNMENT 986 YS2-20m18.p1k chr13 40 1252 2002 3211 F 1213 94.81 1322 ambiguous_tel 11 ALIGNMENT 0 YS2-20m18.p1k chr16 126 862 1651 1650 F 737 0.00 1322 reject_low 181 ALIGNMENT 73 YS2-20m18.p1k chr09 34 125 1907 1998 F 92 93.48 1322 reject_low 41 ALIGNMENT 0 YS2-20m18.p1k chr12 862 136 1069741 1069740 C 727 0.00 1322 reject_low 25 ALIGNMENT 81 YS2-20m18.p1k chr12 135 32 1069740 1069843 C 104 93.27 1322 reject_low 25 ALIGNMENT 0 YS2-20m18.p1k chr12 862 126 1069715 1069714 C 737 0.00 1322 reject_low 57 ALIGNMENT 0 YS2-20m18.p1k chr02 126 862 1798 1797 F 737 0.00 1322 reject_low 106 ALIGNMENT 51 YS2-20m18.p1k chr09 32 135 1689 1792 F 104 83.65 1322 reject_low 66 ALIGNMENT 76 YS2-20m18.p1k chr08 127 32 560563 560658 C 96 93.75 1322 reject_low 36 ALIGNMENT 45 YS2-20m18.p1k chr02 32 125 1489 1582 F 94 82.98 1322 reject_low 111 ALIGNMENT 0 YS2-20m18.p1k chr09 126 862 2034 2033 F 737 0.00 1322 reject_low 126 ALIGNMENT 51 YS2-20m18.p1k chr12 32 125 1758 1851 F 94 85.11 1322 reject_low 103 ALIGNMENT 0 YS2-20m18.p1k chr12 862 136 1076656 1076655 C 727 0.00 1322 reject_low 191 ALIGNMENT 0 YS2-20m18.p1k chr15 862 126 1089306 1089305 C 737 0.00 1322 reject_low 159 ALIGNMENT 0 YS2-20m18.p1k chr16 126 862 1795 1794 F 737 0.00 1322 reject_low 52 ALIGNMENT 40 YS2-20m18.p1k chr16 125 40 946218 946303 C 86 82.56 1322 reject_low 160 ALIGNMENT 989 YS2-20m18.p1k chr05 1252 40 573773 574982 C 1213 94.89 1322 ambiguous_tel 0 ALIGNMENT 70 YS2-20m18.p1k chr16 40 125 1710 1795 F 86 94.19 1322 reject_low 52 ALIGNMENT 34 YS2-20m18.p1k chr04 125 40 1530320 1530405 C 86 80.23 1322 reject_low 169 ALIGNMENT 0 YS2-20m18.p1k chr13 126 862 1763 1762 F 737 0.00 1322 reject_low 118 ALIGNMENT 51 YS2-20m18.p1k chr08 125 32 560493 560586 C 94 85.11 1322 reject_low 101 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 7422 7421 F 737 0.00 1322 reject_low 115 ALIGNMENT 0 YS2-20m18.p1k chr02 126 862 1834 1833 F 737 0.00 1322 reject_low 72 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 1851 1850 F 737 0.00 1322 reject_low 103 ALIGNMENT 0 YS2-20m18.p1k chr16 862 126 946327 946326 C 737 0.00 1322 reject_low 105 ALIGNMENT 37 YS2-20m18.p1k chr02 40 125 1965 2050 F 86 81.40 1322 reject_low 166 ALIGNMENT 0 YS2-20m18.p1k chr15 862 126 1089486 1089485 C 737 0.00 1322 reject_low 180 ALIGNMENT 0 YS2-20m18.p1k chr05 862 136 575284 575283 C 727 0.00 1322 reject_low 185 ALIGNMENT 45 YS2-20m18.p1k chr16 127 40 946360 946447 C 88 84.09 1322 reject_low 128 ALIGNMENT 0 YS2-20m18.p1k chr14 62 99 1573 1572 F 38 0.00 1322 reject_low 193 ALIGNMENT 0 YS2-20m18.p1k chr05 126 862 1854 1853 F 737 0.00 1322 reject_low 43 ALIGNMENT 0 YS2-20m18.p1k chr02 126 862 2122 2121 F 737 0.00 1322 reject_low 32 ALIGNMENT 34 YS2-20m18.p1k chr05 33 109 1978 2054 F 77 81.82 1322 reject_low 162 ALIGNMENT 0 YS2-20m18.p1k chr07 862 126 1089263 1089262 C 737 0.00 1322 reject_low 139 ALIGNMENT 49 YS2-20m18.p1k chr15 125 31 1089413 1089507 C 95 84.21 1322 reject_low 92 ALIGNMENT 49 YS2-20m18.p1k chr05 125 31 575113 575207 C 95 84.21 1322 reject_low 77 ALIGNMENT 0 YS2-20m18.p1k chr12 128 862 1817 1816 F 735 0.00 1322 reject_low 127 ALIGNMENT 37 YS2-20m18.p1k chr05 55 125 1496 1566 F 71 84.51 1322 reject_low 168 ALIGNMENT 46 YS2-20m18.p1k chr02 40 125 2217 2302 F 86 84.88 1322 reject_low 123 ALIGNMENT 0 YS2-20m18.p1k chr05 862 126 575078 575077 C 737 0.00 1322 reject_low 76 ALIGNMENT 78 YS2-20m18.p1k chr02 32 125 2029 2122 F 94 94.68 1322 reject_low 32 ALIGNMENT 55 YS2-20m18.p1k chr09 32 127 1761 1856 F 96 86.46 1322 reject_low 70 ALIGNMENT 45 YS2-20m18.p1k chr04 125 32 1530392 1530485 C 94 82.98 1322 reject_low 112 ALIGNMENT 0 YS2-20m18.p1k chr05 126 862 1602 1601 F 737 0.00 1322 reject_low 170 ALIGNMENT 60 YS2-20m18.p1k chr16 135 32 946388 946491 C 104 86.54 1322 reject_low 45 ALIGNMENT 0 YS2-20m18.p1k chr05 862 126 575114 575113 C 737 0.00 1322 reject_low 77 ALIGNMENT 0 YS2-20m18.p1k chr08 126 862 1819 1818 F 737 0.00 1322 reject_low 100 ALIGNMENT 0 YS2-20m18.p1k chr05 128 862 1712 1711 F 735 0.00 1322 reject_low 64 ALIGNMENT 43 YS2-20m18.p1k chr02 40 125 1569 1654 F 86 83.72 1322 reject_low 132 ALIGNMENT 25 YS2-20m18.p1k chr12 135 100 1076655 1076690 C 36 91.67 1322 reject_low 191 ALIGNMENT 891 YS2-20m18.p1k chr06 129 1252 1257 2372 F 1124 94.31 1322|4,0 reject_low 18 ALIGNMENT 0 YS2-20m18.p1k chr02 128 862 1764 1763 F 735 0.00 1322 reject_low 161 ALIGNMENT 0 YS2-20m18.p1k chr02 128 862 2268 2267 F 735 0.00 1322 reject_low 35 ALIGNMENT 43 YS2-20m18.p1k chr06 40 125 976 1061 F 86 83.72 1322 reject_low 137 ALIGNMENT 46 YS2-20m18.p1k chr02 40 135 2145 2240 F 96 83.33 1322 reject_low 110 ALIGNMENT 0 YS2-20m18.p1k chr05 862 126 575006 575005 C 737 0.00 1322 reject_low 46 ALIGNMENT 34 YS2-20m18.p1k chr14 40 125 1657 1742 F 86 80.23 1322 reject_low 179 ALIGNMENT 0 YS2-20m18.p1k chr07 862 126 1089227 1089226 C 737 0.00 1322 reject_low 173 ALIGNMENT 81 YS2-20m18.p1k chr14 32 135 1757 1860 F 104 93.27 1322 reject_low 27 ALIGNMENT 61 YS2-20m18.p1k chr08 32 127 1654 1749 F 96 88.54 1322 reject_low 60 ALIGNMENT 972 YS2-20m18.p1k chr09 129 1252 2374 3506 F 1124 96.17 1322|4,0 reject_low 15 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 1959 1958 F 737 0.00 1322 reject_low 167 ALIGNMENT 0 YS2-20m18.p1k chr06 133 132 1105 1260 F 0 0.00 1322 reject_low 18 ALIGNMENT 0 YS2-20m18.p1k chr14 126 862 1886 1885 F 737 0.00 1322 reject_low 51 ALIGNMENT 43 YS2-20m18.p1k chr12 40 125 7373 7458 F 86 83.72 1322 reject_low 142 ALIGNMENT 0 YS2-20m18.p1k chr16 862 126 946435 946434 C 737 0.00 1322 reject_low 199 ALIGNMENT 989 YS2-20m18.p1k chr16 40 1252 1818 3027 F 1213 94.89 1322 ambiguous_tel 3 ALIGNMENT 40 YS2-20m18.p1k chr15 125 40 1089305 1089390 C 86 82.56 1322 reject_low 159 ALIGNMENT 45 YS2-20m18.p1k chr14 32 125 1577 1670 F 94 82.98 1322 reject_low 119 ALIGNMENT 51 YS2-20m18.p1k chr08 32 125 1726 1819 F 94 85.11 1322 reject_low 100 ALIGNMENT 0 YS2-20m18.p1k chr07 862 126 1089155 1089154 C 737 0.00 1322 reject_low 78 ALIGNMENT 49 YS2-20m18.p1k chr12 31 125 7436 7530 F 95 84.21 1322 reject_low 82 ALIGNMENT 974 YS2-20m18.q1k chr02 1187 37 2628 3769 C 1151 95.74 1237 ambiguous_tel 12 ALIGNMENT 0 YS2-20m18.p1k chr04 862 126 1530249 1530248 C 737 0.00 1322 reject_low 74 ALIGNMENT 21 YS2-20m18.p1k chr05 40 134 1913 2007 F 95 74.74 1322 reject_low 200 ALIGNMENT 58 YS2-20m18.p1k chr05 32 127 1617 1712 F 96 87.50 1322 reject_low 64 ALIGNMENT 984 YS2-20m18.q1k chr06 1187 37 1466 2605 C 1151 96.00 1237 reject_low 18 ALIGNMENT 0 YS2-20m18.p1k chr12 126 862 2103 2102 F 737 0.00 1322 reject_low 48 ALIGNMENT 0 YS2-20m18.p1k chr12 136 862 2077 2076 F 727 0.00 1322 reject_low 23 ALIGNMENT 46 YS2-20m18.p1k chr08 125 40 560529 560614 C 86 84.88 1322 reject_low 125 ALIGNMENT 0 YS2-20m18.p1k chr08 62 99 1650 1649 F 38 0.00 1322 reject_low 186 ALIGNMENT 0 YS2-20m18.p1k chr06 126 862 953 952 F 737 0.00 1322 reject_low 154 ALIGNMENT 57 YS2-20m18.p1k chr05 32 135 1725 1828 F 104 85.58 1322 reject_low 55 ALIGNMENT 0 YS2-20m18.p1k chr02 136 862 1520 1519 F 727 0.00 1322 reject_low 183 ALIGNMENT 0 YS2-20m18.p1k chr15 862 126 1089558 1089557 C 737 0.00 1322 reject_low 120 ALIGNMENT 34 YS2-20m18.p1k chr12 125 40 1069858 1069943 C 86 80.23 1322 reject_low 176 ALIGNMENT 49 YS2-20m18.p1k chr07 125 31 1089190 1089284 C 95 84.21 1322 reject_low 79 ALIGNMENT 70 YS2-20m18.p1k chr16 125 40 946074 946159 C 86 94.19 1322 reject_low 53 ALIGNMENT 0 YS2-20m18.p1k chr10 110 862 2361 2360 F 753 0.00 1322 reject_low 165 ALIGNMENT 26 YS2-20m18.p1k chr16 125 76 946434 946483 C 50 84.00 1322 reject_low 199 ALIGNMENT 49 YS2-20m18.p1k chr12 125 31 1076485 1076579 C 95 84.21 1322 reject_low 87 ALIGNMENT 975 YS2-20m18.p1k chr02 40 1252 2325 3536 F 1213 94.56 1322 ambiguous_tel 12 ALIGNMENT 0 YS2-20m18.p1k chr14 136 862 1608 1607 F 727 0.00 1322 reject_low 193 ALIGNMENT 0 YS2-20m18.p1k chr16 126 862 1831 1830 F 737 0.00 1322 reject_low 152 ALIGNMENT 29 YS2-20m18.p1k chr09 76 120 1697 1741 F 45 88.89 1322 reject_low 197 ALIGNMENT 634 YS2-20m19.q1k chr02 1070 188 305506 306355 C 883 94.00 1323 accept 0 ALIGNMENT 1057 YS2-20m19.p1k chr02 32 1269 301598 302850 F 1238 95.88 1284 accept 0 ALIGNMENT 0 YS2-20m20.q1k chr09 874 779 393305 393304 C 96 0.00 1228 accept 0 ALIGNMENT 187 YS2-20m20.q1k chr09 1057 795 393068 393332 C 263 91.25 1228 reject_low 1 ALIGNMENT 633 YS2-20m20.q1k chr09 778 30 393304 394052 C 749 95.99 1228 accept 0 ALIGNMENT 941 YS2-20m20.p1k chr09 41 1162 388660 389796 F 1122 96.17 1289 accept 0 ALIGNMENT 0 YS2-20m20.q1k chr09 794 62 393333 393332 C 733 0.00 1228 reject_low 1 ALIGNMENT 136 YS2-20m21.p1k vc_1 714 366 1757 2105 C 349 80.52 1405 reject_vc 0 ALIGNMENT 0 YS2-20m21.q1k chrm 107 62 6184 6183 C 46 0.00 399 reject_low 30 ALIGNMENT 0 YS2-20m21.p1k chrm 92 226 81514 81513 F 135 0.00 1405 reject_low 14 ALIGNMENT 0 YS2-20m21.p1k chrm 310 92 13631 13630 C 219 0.00 1405 reject_low 12 ALIGNMENT 0 YS2-20m21.q1k chrm 179 153 68626 68611 C 27 0.00 399 reject_low 28 ALIGNMENT 62 YS2-20m21.p1k chrm 219 307 84178 84265 F 89 92.13 1405 reject_low 17 ALIGNMENT 0 YS2-20m21.p1k chrm 276 374 81562 81561 F 99 0.00 1405 reject_low 14 ALIGNMENT 43 YS2-20m21.p1k chrm 248 193 35111 35166 C 56 92.86 1405|0,7 reject_low 24 ALIGNMENT 0 YS2-20m21.q1k chrm 74 399 13629 13628 F 326 0.00 399 reject_low 7 ALIGNMENT 0 YS2-20m21.q1k chrm 179 153 50740 50725 C 27 0.00 399 reject_low 27 ALIGNMENT 28 YS2-20m21.q1k chrm 38 73 13594 13629 F 36 100.00 399 reject_low 7,8 ALIGNMENT 0 YS2-20m21.p1k vc_2 365 92 2106 2105 C 274 0.00 1405 reject_vc 1 ALIGNMENT 0 YS2-20m21.q1k chrm 399 202 50719 50718 C 198 0.00 399 reject_low 27 ALIGNMENT 67 YS2-20m21.q1k chrm 199 358 13628 13798 F 160 92.50 399 reject_low 8 ALIGNMENT 41 YS2-20m21.p1k chrm 230 185 53712 53757 C 46 97.83 1405 reject_low 16 ALIGNMENT 0 YS2-20m21.q1k chrm 62 81 85595 85594 F 20 0.00 399 reject_low 20 ALIGNMENT 0 YS2-20m21.q1k chrm 168 399 85679 85678 F 232 0.00 399 reject_low 20 ALIGNMENT 0 YS2-20m21.p1k chrm 233 92 55541 55540 C 142 0.00 1405 reject_low 25 ALIGNMENT 0 YS2-20m21.p1k chrm 374 318 85583 85582 C 57 0.00 1405 reject_low 15 ALIGNMENT 0 YS2-20m21.q1k chrm 159 160 5257 6133 C 0 0.00 399 reject_low 30 ALIGNMENT 0 YS2-20m21.q1k chrm 74 198 13630 13627 F 125 0.00 399 reject_low 8 ALIGNMENT 72 YS2-20m21.p1k chrm 187 78 13628 13737 C 110 98.18 1405 reject_low 7 ALIGNMENT 0 YS2-20m21.p1k vc_3 365 92 2106 2105 C 274 0.00 1405 reject_vc 2 ALIGNMENT 0 YS2-20m21.p1k chrm 218 92 85680 85679 C 127 0.00 1405 reject_low 15 ALIGNMENT 0 YS2-20m21.q1k chrm 202 399 53757 53756 F 198 0.00 399 reject_low 25 ALIGNMENT 43 YS2-20m21.q1k chrm 156 201 53712 53757 F 46 100.00 399 reject_low 25 ALIGNMENT 0 YS2-20m21.p1k vc_7 92 365 100 99 F 274 0.00 1405 reject_vc 5 ALIGNMENT 0 YS2-20m21.q1k chrm 94 62 2619 2618 C 33 0.00 399 reject_low 29 ALIGNMENT 69 YS2-20m21.q1k chrm 167 84 84178 84260 C 84 96.43 399 reject_low 14 ALIGNMENT 0 YS2-20m21.p1k vc_4 92 365 5871 5870 F 274 0.00 1405 reject_vc 3 ALIGNMENT 0 YS2-20m21.q1k chrm 81 62 50803 50802 C 20 0.00 399 reject_low 27 ALIGNMENT 0 YS2-20m21.q1k vc_3 358 62 2513 2512 C 297 0.00 399 reject_low 11 ALIGNMENT 0 YS2-20m21.q1k chrm 106 62 81567 81566 C 45 0.00 399 reject_low 22 ALIGNMENT 0 YS2-20m21.q1k vc_2 358 62 2146 2145 C 297 0.00 399 reject_low 10 ALIGNMENT 0 YS2-20m21.p1k chrm 92 218 84178 84177 F 127 0.00 1405 reject_low 17 ALIGNMENT 0 YS2-20m21.p1k vc_7 92 365 13562 13561 F 274 0.00 1405 reject_vc 6 ALIGNMENT 0 YS2-20m21.q1k chrm 128 125 2576 2588 C 4 0.00 399 reject_low 29 ALIGNMENT 136 YS2-20m21.p1k vc_5 714 366 4677 5025 C 349 80.52 1405 reject_vc 4 ALIGNMENT 41 YS2-20m21.q1k vc_2 399 359 2105 2145 C 41 100.00 399 reject_low 10 ALIGNMENT 0 YS2-20m21.p1k chrm 374 316 55425 55424 C 59 0.00 1405 reject_low 25 ALIGNMENT 0 YS2-20m21.p1k vc_1 365 92 2473 2472 C 274 0.00 1405 reject_low 18 ALIGNMENT 0 YS2-20m21.p1k chrm 374 318 40354 40353 C 57 0.00 1405 reject_low 26 ALIGNMENT 41 YS2-20m21.q1k vc_3 399 359 2472 2512 C 41 100.00 399 reject_low 11 ALIGNMENT 21 YS2-20m21.q1k chrm 177 156 532 553 C 22 100.00 399|0,11 reject_low 29,30 ALIGNMENT 64 YS2-20m21.q1k chrm 82 167 85595 85679 F 86 94.19 399 reject_low 20 ALIGNMENT 136 YS2-20m21.p1k vc_3 714 366 1757 2105 C 349 80.52 1405 reject_vc 2 ALIGNMENT 0 YS2-20m21.q1k chrm 359 399 13798 13797 F 41 0.00 399 reject_low 8 ALIGNMENT 38 YS2-20m21.q1k vc_7 362 399 13525 13562 F 38 100.00 399 reject_low 13 ALIGNMENT 70 YS2-20m21.p1k chrm 317 219 85582 85679 C 99 91.92 1405 reject_low 15 ALIGNMENT 0 YS2-20m21.p1k vc_1 365 92 2106 2105 C 274 0.00 1405 reject_vc 0 ALIGNMENT 23 YS2-20m21.p1k chrm 278 234 55497 55540 C 45 86.67 1405 reject_low 25 ALIGNMENT 20 YS2-20m21.p1k chrm 315 292 55424 55447 C 24 100.00 1405 reject_low 25 ALIGNMENT 0 YS2-20m21.q1k chrm 399 168 84179 84178 C 232 0.00 399 reject_low 14 ALIGNMENT 0 YS2-20m21.p1k chrm 374 348 13595 13594 C 27 0.00 1405 reject_low 12 ALIGNMENT 0 YS2-20m21.q1k chrm 399 160 81515 81514 C 240 0.00 399 reject_low 22 ALIGNMENT 23 YS2-20m21.q1k chrm 152 129 68612 68635 C 24 100.00 399 reject_low 28 ALIGNMENT 0 YS2-20m21.p1k chrm 308 374 84265 84264 F 67 0.00 1405 reject_low 17 ALIGNMENT 0 YS2-20m21.p1k chrm 291 279 55448 55496 C 13 0.00 1405 reject_low 25 ALIGNMENT 0 YS2-20m21.q1k chrm 399 178 533 532 C 222 0.00 399 reject_low 29,30 ALIGNMENT 20 YS2-20m21.p1k chrm 206 185 40422 40443 C 22 100.00 1405|7,0 reject_low 24,26 ALIGNMENT 0 YS2-20m21.p1k vc_3 365 92 2473 2472 C 274 0.00 1405 reject_low 19 ALIGNMENT 0 YS2-20m21.q1k vc_1 358 62 2513 2512 C 297 0.00 399 reject_low 9 ALIGNMENT 0 YS2-20m21.p1k vc_5 365 92 5026 5025 C 274 0.00 1405 reject_vc 4 ALIGNMENT 0 YS2-20m21.q1k chrm 99 62 68674 68673 C 38 0.00 399 reject_low 28 ALIGNMENT 136 YS2-20m21.p1k vc_4 366 714 5871 6219 F 349 80.52 1405 reject_vc 3 ALIGNMENT 39 YS2-20m21.q1k chrm 152 82 50726 50802 C 71 90.14 399 reject_low 27 ALIGNMENT 22 YS2-20m21.q1k chrm 177 153 5239 5263 C 25 96.00 399|11,7 reject_low 30 ALIGNMENT 0 YS2-20m21.q1k chrm 128 125 68636 68648 C 4 0.00 399 reject_low 28 ALIGNMENT 0 YS2-20m21.q1k chrm 166 167 543 5249 C 0 0.00 399 reject_low 30 ALIGNMENT 0 YS2-20m21.p1k chrm 374 249 35112 35111 C 126 0.00 1405 reject_low 24 ALIGNMENT 0 YS2-20m21.p1k chrm 233 207 40436 40421 C 27 0.00 1405 reject_low 26 ALIGNMENT 136 YS2-20m21.p1k vc_7 366 714 100 448 F 349 80.52 1405 reject_vc 5 ALIGNMENT 0 YS2-20m21.p1k chrm 374 231 53713 53712 C 144 0.00 1405 reject_low 16 ALIGNMENT 0 YS2-20m21.p1k chrm 184 92 40444 40443 C 93 0.00 1405 reject_low 24,26 ALIGNMENT 136 YS2-20m21.p1k vc_2 714 366 1757 2105 C 349 80.52 1405 reject_vc 1 ALIGNMENT 0 YS2-20m21.q1k chrm 399 202 5152 5151 C 198 0.00 399 reject_low 21 ALIGNMENT 36 YS2-20m21.q1k chrm 166 108 6127 6183 C 59 89.83 399|7,0 reject_low 30 ALIGNMENT 0 YS2-20m21.p1k chrm 374 188 13629 13628 C 187 0.00 1405 reject_low 7 ALIGNMENT 0 YS2-20m21.q1k chrm 399 205 68602 68601 C 195 0.00 399 reject_low 28 ALIGNMENT 35 YS2-20m21.q1k chrm 159 107 81514 81566 C 53 88.68 399 reject_low 22 ALIGNMENT 26 YS2-20m21.p1k vc_3 396 366 2441 2472 C 31 96.77 1405 reject_low 19 ALIGNMENT 34 YS2-20m21.p1k chrm 227 275 81514 81562 F 49 89.80 1405 reject_low 14 ALIGNMENT 23 YS2-20m21.q1k chrm 124 95 2589 2618 C 30 96.67 399 reject_low 29 ALIGNMENT 26 YS2-20m21.p1k vc_1 396 366 2441 2472 C 31 96.77 1405 reject_low 18 ALIGNMENT 43 YS2-20m21.q1k chrm 201 129 5151 5228 C 73 89.04 399 reject_low 21 ALIGNMENT 41 YS2-20m21.q1k vc_1 399 359 2472 2512 C 41 100.00 399 reject_low 9 ALIGNMENT 21 YS2-20m21.q1k chrm 158 138 488 508 C 21 100.00 399 reject_low 23 ALIGNMENT 22 YS2-20m21.p1k chrm 317 234 40353 40435 C 84 80.95 1405 reject_low 26 ALIGNMENT 0 YS2-20m21.q1k chrm 62 155 53712 53711 F 94 0.00 399 reject_low 25 ALIGNMENT 0 YS2-20m21.q1k vc_7 62 361 13525 13524 F 300 0.00 399 reject_low 13 ALIGNMENT 25 YS2-20m21.p1k chrm 347 311 13594 13630 C 37 97.30 1405 reject_low 12 ALIGNMENT 0 YS2-20m21.p1k chrm 184 92 53758 53757 C 93 0.00 1405 reject_low 16 ALIGNMENT 0 YS2-20m21.p1k chrm 199 200 35160 40428 C 0 0.00 1405 reject_low 24 ALIGNMENT 20 YS2-20m21.q1k chrm 124 100 68649 68673 C 25 96.00 399 reject_low 28 ALIGNMENT 0 YS2-20m21.q1k chrm 399 159 489 488 C 241 0.00 399 reject_low 23 ALIGNMENT 0 YS2-20m21.q1k chrm 83 62 84261 84260 C 22 0.00 399 reject_low 14 ALIGNMENT 0 YS2-20m21.q1k chrm 137 62 509 508 C 76 0.00 399 reject_low 23 ALIGNMENT 39 YS2-20m21.q1k chrm 167 129 2537 2575 C 39 100.00 399|6,0 reject_low 29 ALIGNMENT 20 YS2-20m21.q1k chrm 201 180 50718 50739 C 22 100.00 399 reject_low 27 ALIGNMENT 24 YS2-20m21.q1k chrm 204 180 68601 68625 C 25 100.00 399 reject_low 28 ALIGNMENT 0 YS2-20m21.q1k chrm 161 162 548 2542 C 0 0.00 399 reject_low 29 ALIGNMENT 0 YS2-20m21.q1k chrm 128 62 5229 5228 C 67 0.00 399 reject_low 21 ALIGNMENT 136 YS2-20m21.p1k vc_7 366 714 13562 13910 F 349 80.52 1405 reject_vc 6 ALIGNMENT 241 YS2-20m22.p1k vc_5 970 168 4223 5025 C 803 77.46 1310 reject_vc 2 ALIGNMENT 74 YS2-20m22.p1k vc_4 168 523 5871 6225 F 356 74.44 1310 reject_low 4 ALIGNMENT 20 YS2-20m22.p1k vc_7 1057 1132 985 1058 F 76 77.63 1310 reject_vc 0 ALIGNMENT 0 YS2-20m22.p1k vc_7 971 1056 903 984 F 86 0.00 1310 reject_vc 0 ALIGNMENT 20 YS2-20m22.p1k vc_5 1132 1057 4067 4140 C 76 77.63 1310 reject_vc 2 ALIGNMENT 0 YS2-20m22.p1k vc_5 1056 971 4141 4222 C 86 0.00 1310 reject_vc 2 ALIGNMENT 244 YS2-20m22.p1k vc_7 168 970 100 902 F 803 77.58 1310 reject_vc 0 ALIGNMENT 75 YS2-20m22.p1k chr15 30 149 52113 52232 F 120 89.17 1310 reject_low 3 ALIGNMENT 244 YS2-20m22.p1k vc_7 168 970 13562 14364 F 803 77.58 1310 reject_vc 1 ALIGNMENT 20 YS2-20m22.p1k vc_7 1057 1132 14447 14520 F 76 77.63 1310 reject_vc 1 ALIGNMENT 0 YS2-20m22.p1k vc_7 971 1056 14365 14446 F 86 0.00 1310 reject_vc 1 ALIGNMENT 40 YS2-20m23.q1k vc_3 371 332 2472 2511 C 40 100.00 371 reject_low 4 ALIGNMENT 36 YS2-20m23.q1k vc_5 368 333 1 36 C 36 100.00 371 reject_low 8 ALIGNMENT 40 YS2-20m23.q1k vc_2 371 332 2105 2144 C 40 100.00 371 reject_low 3 ALIGNMENT 38 YS2-20m23.q1k vc_7 334 371 13525 13562 F 38 100.00 371 reject_low 7 ALIGNMENT 0 YS2-20m23.q1k vc_2 331 62 2145 2144 C 270 0.00 371 reject_low 3 ALIGNMENT 286 YS2-20m23.p1k chr07 32 324 920249 920542 F 293 99.32 341 accept_chi 0 ALIGNMENT 40 YS2-20m23.q1k vc_1 371 332 2472 2511 C 40 100.00 371 reject_low 2 ALIGNMENT 40 YS2-20m23.q1k vc_4 332 371 5832 5871 F 40 100.00 371 reject_low 5 ALIGNMENT 0 YS2-20m23.q1k vc_7 62 333 13525 13524 F 272 0.00 371 reject_low 7 ALIGNMENT 0 YS2-20m23.q1k vc_1 331 62 2512 2511 C 270 0.00 371 reject_low 2 ALIGNMENT 0 YS2-20m23.q1k vc_5 332 62 5064 5063 C 271 0.00 371 reject_low 6 ALIGNMENT 39 YS2-20m23.q1k vc_5 371 333 5025 5063 C 39 100.00 371 reject_low 6 ALIGNMENT 277 YS2-20m23.q1k chr07 331 39 920249 920542 C 293 98.29 371 accept_chi 1 ALIGNMENT 0 YS2-20m23.q1k chr07 371 332 920250 920249 C 40 0.00 371 accept_chi 1 ALIGNMENT 0 YS2-20m23.q1k vc_4 62 331 5832 5831 F 270 0.00 371 reject_low 5 ALIGNMENT 0 YS2-20m23.q1k vc_3 331 62 2512 2511 C 270 0.00 371 reject_low 4 ALIGNMENT 0 YS2-20m23.p1k chr07 325 341 920542 920541 F 17 0.00 341 accept_chi 0 ALIGNMENT 0 YS2-20m23.q1k vc_5 332 62 37 36 C 271 0.00 371 reject_low 8 ALIGNMENT 364 YS2-20m24.p1k chr07 435 40 793895 794290 C 396 98.48 1249 reject_bad_break 0 ALIGNMENT 0 YS2-20m24.p1k chr07 573 436 793898 793894 C 138 0.00 1249 reject_bad_break 0 ALIGNMENT 967 YS2-20m24.q1k chr07 36 1109 790656 791727 F 1074 97.86 1109 reject_bad_break 0 ALIGNMENT 425 YS2-20m24.p1k chr07 1148 574 793311 793897 C 575 92.52 1249 reject_bad_break 0 ALIGNMENT 0 YS2-20n01.q1k vc_5 684 62 37 36 C 623 0.00 723 reject_low 10 ALIGNMENT 0 YS2-20n01.q1k vc_4 62 682 5831 5830 F 621 0.00 723 reject_low 7 ALIGNMENT 627 YS2-20n01.q1k chr16 39 682 69540 70183 F 644 100.00 723 accept 0 ALIGNMENT 64 YS2-20n01.p1k vc_5 751 595 4866 5023 C 157 82.17 1172 reject_low 2 ALIGNMENT 64 YS2-20n01.p1k vc_7 595 751 13564 13721 F 157 82.17 1172 reject_low 3 ALIGNMENT 0 YS2-20n01.q1k vc_7 62 685 13525 13524 F 624 0.00 723 reject_low 9 ALIGNMENT 41 YS2-20n01.q1k vc_3 723 683 2472 2512 C 41 100.00 723 reject_low 6 ALIGNMENT 0 YS2-20n01.q1k chr16 683 723 70183 70182 F 41 0.00 723 accept 0 ALIGNMENT 450 YS2-20n01.p1k chr16 574 1 69541 70108 C 574 94.25 1172 accept 0 ALIGNMENT 64 YS2-20n01.p1k vc_4 595 751 5873 6030 F 157 82.17 1172 reject_low 1 ALIGNMENT 0 YS2-20n01.p1k vc_7 116 594 13564 13563 F 479 0.00 1172 reject_low 3 ALIGNMENT 0 YS2-20n01.q1k vc_1 682 62 2513 2512 C 621 0.00 723 reject_low 4 ALIGNMENT 0 YS2-20n01.p1k vc_4 116 594 5873 5872 F 479 0.00 1172 reject_low 1 ALIGNMENT 41 YS2-20n01.q1k vc_2 723 683 2105 2145 C 41 100.00 723 reject_low 5 ALIGNMENT 0 YS2-20n01.q1k vc_5 684 62 5064 5063 C 623 0.00 723 reject_low 8 ALIGNMENT 0 YS2-20n01.p1k vc_5 594 116 5024 5023 C 479 0.00 1172 reject_low 2 ALIGNMENT 41 YS2-20n01.q1k vc_4 683 723 5831 5871 F 41 100.00 723 reject_low 7 ALIGNMENT 0 YS2-20n01.q1k vc_2 682 62 2146 2145 C 621 0.00 723 reject_low 5 ALIGNMENT 0 YS2-20n01.q1k vc_3 682 62 2513 2512 C 621 0.00 723 reject_low 6 ALIGNMENT 38 YS2-20n01.q1k vc_7 686 723 13525 13562 F 38 100.00 723 reject_low 9 ALIGNMENT 36 YS2-20n01.q1k vc_5 720 685 1 36 C 36 100.00 723 reject_low 10 ALIGNMENT 41 YS2-20n01.q1k vc_1 723 683 2472 2512 C 41 100.00 723 reject_low 4 ALIGNMENT 39 YS2-20n01.q1k vc_5 723 685 5025 5063 C 39 100.00 723 reject_low 8 ALIGNMENT 666 YS2-20n02.q1k chr10 823 39 135588 136353 C 785 96.43 1268 accept 0 ALIGNMENT 995 YS2-20n02.p1k chr10 33 1278 132278 133504 F 1246 94.94 1334 accept 0 ALIGNMENT 580 YS2-20n03.q1k chr01 34 724 86571 87256 F 691 95.95 1183 accept 0 ALIGNMENT 1030 YS2-20n03.p1k chr01 1168 39 91016 92156 C 1130 97.52 1316 accept 0 ALIGNMENT 980 YS2-20n04.p1k chr10 1142 38 317399 318513 C 1105 96.83 1311 accept 0 ALIGNMENT 1047 YS2-20n04.q1k chr10 30 1225 313750 314947 F 1196 95.82 1323 accept 0 ALIGNMENT 315 YS2-20n06.q1k scplasm1 233 741 1691 2192 F 509 88.80 1221 accept_chi 1 ALIGNMENT 924 YS2-20n06.p1k scplasm1 1 1054 4313 5372 F 1054 96.87 1123 accept_chi 0 ALIGNMENT 333 YS2-20n07.q1k chr05 39 621 561259 561843 F 583 87.48 1299 accept 0 ALIGNMENT 712 YS2-20n07.p1k chr05 1187 32 565260 566428 C 1156 88.15 1370 accept 0 ALIGNMENT 741 YS2-20n08.q1k chr15 968 35 672994 673945 C 934 94.43 1068 accept 0 ALIGNMENT 901 YS2-20n08.p1k chr15 34 1155 670077 671214 F 1122 94.83 1347 accept 0 ALIGNMENT 983 YS2-20n09.q1k chr05 1156 39 352489 353611 C 1118 96.33 1246 accept 0 ALIGNMENT 1056 YS2-20n09.p1k chr05 32 1275 347653 348904 F 1244 95.58 1329 accept 0 ALIGNMENT 613 YS2-20n11.p1k scplasm1 45 957 2036 2948 F 913 89.81 1329 accept_chi 1 ALIGNMENT 703 YS2-20n11.q1k scplasm1 1076 43 976 2028 C 1034 90.23 1196 accept_chi 0 ALIGNMENT 1049 YS2-20n12.q1k chr14 36 1209 187429 188603 F 1174 96.85 1216 accept 0 ALIGNMENT 976 YS2-20n12.p1k chr14 1294 31 190510 191757 C 1264 94.15 1395 accept 0 ALIGNMENT 489 YS2-20n13.q1k chr13 30 624 415718 416307 F 595 95.80 1252 accept 0 ALIGNMENT 950 YS2-20n13.p1k chr13 1139 35 417417 418537 C 1105 97.38 1313 accept 0 ALIGNMENT 0 YS2-20n15.q1k vc_3 221 62 2513 2512 C 160 0.00 262 reject_low 3 ALIGNMENT 41 YS2-20n15.q1k vc_4 222 262 5831 5871 F 41 100.00 262 reject_low 4 ALIGNMENT 39 YS2-20n15.q1k vc_5 262 224 5025 5063 C 39 100.00 262 reject_low 5 ALIGNMENT 38 YS2-20n15.q1k vc_7 225 262 13525 13562 F 38 100.00 262 reject_low 6 ALIGNMENT 0 YS2-20n15.q1k vc_5 223 62 37 36 C 162 0.00 262 reject_low 7 ALIGNMENT 41 YS2-20n15.q1k vc_3 262 222 2472 2512 C 41 100.00 262 reject_low 3 ALIGNMENT 0 YS2-20n15.q1k vc_7 62 224 13525 13524 F 163 0.00 262 reject_low 6 ALIGNMENT 162 YS2-20n15.p1k chrm 32 218 25568 25754 F 187 100.00 237 accept_chi 1 ALIGNMENT 36 YS2-20n15.q1k vc_5 259 224 1 36 C 36 100.00 262 reject_low 7 ALIGNMENT 166 YS2-20n15.q1k chrm 221 29 25562 25754 C 193 100.00 262 accept_chi 0 ALIGNMENT 0 YS2-20n15.q1k vc_5 223 62 5064 5063 C 162 0.00 262 reject_low 5 ALIGNMENT 0 YS2-20n15.q1k chrm 262 222 25563 25562 C 41 0.00 262 accept_chi 0 ALIGNMENT 41 YS2-20n15.q1k vc_1 262 222 2472 2512 C 41 100.00 262 reject_low 2 ALIGNMENT 0 YS2-20n15.p1k chrm 219 237 25754 25753 F 19 0.00 237 accept_chi 1 ALIGNMENT 0 YS2-20n15.q1k vc_1 221 62 2513 2512 C 160 0.00 262 reject_low 2 ALIGNMENT 0 YS2-20n15.q1k vc_4 62 221 5831 5830 F 160 0.00 262 reject_low 4 ALIGNMENT 857 YS2-20n16.q1k chr01 1043 37 9994 11013 C 1007 97.02 1216 accept 0 ALIGNMENT 982 YS2-20n16.p1k chr01 38 1195 9548 10710 F 1158 96.80 1201 accept 0 ALIGNMENT 856 YS2-20n17.q1k chr09 35 1131 138388 139482 F 1097 93.89 1223 accept 0 ALIGNMENT 923 YS2-20n17.p1k chr09 1289 29 138559 139812 C 1261 92.55 1312 accept 0 ALIGNMENT 976 YS2-20n18.p1k chr16 33 1201 739091 740273 F 1169 94.78 1309 accept 0 ALIGNMENT 909 YS2-20n18.q1k chr16 1072 36 742889 743929 C 1037 96.72 1245 accept 0 ALIGNMENT 36 YS2-20n19.q1k vc_5 364 329 1 36 C 36 100.00 367 reject_low 7 ALIGNMENT 0 YS2-20n19.q1k vc_5 328 152 5064 5063 C 177 0.00 367 reject_low 5 ALIGNMENT 0 YS2-20n19.q1k vc_5 328 152 37 36 C 177 0.00 367 reject_low 7 ALIGNMENT 217 YS2-20n19.p1k chr15 36 260 388080 388304 F 225 100.00 279 accept_chi 0 ALIGNMENT 0 YS2-20n19.q1k chr15 367 327 388074 388073 C 41 0.00 367 accept_chi 1 ALIGNMENT 0 YS2-20n19.q1k vc_7 152 329 13525 13524 F 178 0.00 367 reject_low 6 ALIGNMENT 41 YS2-20n19.q1k vc_4 327 367 5831 5871 F 41 100.00 367 reject_low 4 ALIGNMENT 41 YS2-20n19.q1k vc_1 367 327 2472 2512 C 41 100.00 367 reject_low 2 ALIGNMENT 0 YS2-20n19.q1k vc_1 326 152 2513 2512 C 175 0.00 367 reject_low 2 ALIGNMENT 0 YS2-20n19.p1k chr15 261 279 388304 388303 F 19 0.00 279 accept_chi 0 ALIGNMENT 185 YS2-20n19.q1k chr15 326 120 388073 388282 C 207 98.55 367 accept_chi 1 ALIGNMENT 39 YS2-20n19.q1k vc_5 367 329 5025 5063 C 39 100.00 367 reject_low 5 ALIGNMENT 38 YS2-20n19.q1k vc_7 330 367 13525 13562 F 38 100.00 367 reject_low 6 ALIGNMENT 0 YS2-20n19.q1k vc_4 152 326 5831 5830 F 175 0.00 367 reject_low 4 ALIGNMENT 41 YS2-20n19.q1k vc_3 367 327 2472 2512 C 41 100.00 367 reject_low 3 ALIGNMENT 0 YS2-20n19.q1k vc_3 326 152 2513 2512 C 175 0.00 367 reject_low 3 ALIGNMENT 171 YS2-20n20.q1k vc_7 290 53 4933 5172 C 238 91.60 782|0,1 reject_low 11 ALIGNMENT 398 YS2-20n20.p1k vc_3 623 1 1115 1749 C 623 89.57 653 reject_low 4 ALIGNMENT 225 YS2-20n20.q1k vc_3 1 290 2689 2980 F 290 93.45 782 reject_low 10 ALIGNMENT 51 YS2-20n20.q1k vc_7 54 3 6360 6411 C 52 100.00 782|1,0 reject_low 11 ALIGNMENT 225 YS2-20n20.q1k vc_2 1 290 2322 2613 F 290 93.45 782 reject_low 9 ALIGNMENT 398 YS2-20n20.p1k vc_1 623 1 1115 1749 C 623 89.57 653 reject_low 2 ALIGNMENT 398 YS2-20n20.p1k vc_2 623 1 1115 1749 C 623 89.57 653 reject_low 3 ALIGNMENT 238 YS2-20n20.q1k vc_5 1 376 2556 2930 F 376 88.83 782 reject_vc 0 ALIGNMENT 237 YS2-20n20.q1k vc_7 376 1 2195 2569 C 376 88.83 782 reject_vc 1 ALIGNMENT 392 YS2-20n20.p1k vc_7 1 623 456 1090 F 623 89.25 653 reject_vc 1 ALIGNMENT 225 YS2-20n20.q1k vc_1 1 290 2689 2980 F 290 93.45 782 reject_low 8 ALIGNMENT 0 YS2-20n20.q1k vc_7 53 54 5172 6360 C 0 0.00 782 reject_low 11 ALIGNMENT 392 YS2-20n20.p1k vc_7 1 623 13918 14552 F 623 89.25 653 reject_low 5 ALIGNMENT 387 YS2-20n20.p1k vc_6 1 553 3712 4274 F 553 91.50 653 reject_low 6 ALIGNMENT 230 YS2-20n20.q1k vc_4 376 1 5278 5654 C 376 88.30 782 reject_low 7 ALIGNMENT 401 YS2-20n20.p1k vc_5 623 1 4035 4669 C 623 89.73 653 reject_vc 0 ALIGNMENT 35 YS2-20n22.q1k vc_7 1046 1083 13525 13562 F 38 97.37 1126 reject_low 30 ALIGNMENT 36 YS2-20n22.q1k vc_4 1083 1124 6353 6394 F 42 95.24 1126|1,0 reject_low 8 ALIGNMENT 111 YS2-20n22.q1k chr12 978 855 92532 92656 C 124 96.77 1126 reject_low 10 ALIGNMENT 0 YS2-20n22.p1k chr14 62 118 568116 568115 F 57 0.00 1288 reject_low 15 ALIGNMENT 0 YS2-20n22.q1k vc_7 62 1045 13525 13524 F 984 0.00 1126 reject_low 30 ALIGNMENT 38 YS2-20n22.q1k vc_3 1083 1043 2472 2512 C 41 97.56 1126 reject_low 19 ALIGNMENT 0 YS2-20n22.p1k chr15 226 822 464556 464555 F 597 0.00 1288 reject_low 11 ALIGNMENT 0 YS2-20n22.q1k vc_1 62 1082 2531 2530 F 1021 0.00 1126 reject_low 2 ALIGNMENT 0 YS2-20n22.q1k chr12 854 62 92657 92656 C 793 0.00 1126 reject_low 10 ALIGNMENT 111 YS2-20n22.p1k chr15 107 225 464439 464556 F 119 98.32 1288 reject_low 11 ALIGNMENT 0 YS2-20n22.p1k chr15 230 822 980790 980789 F 593 0.00 1288 reject_low 27 ALIGNMENT 0 YS2-20n22.p1k chr14 225 822 568221 568220 F 598 0.00 1288 reject_low 15 ALIGNMENT 36 YS2-20n22.q1k vc_5 1083 1124 2398 2439 F 42 95.24 1126 reject_low 7 ALIGNMENT 0 YS2-20n22.p1k chr15 229 822 301205 301204 F 594 0.00 1288 reject_low 23 ALIGNMENT 36 YS2-20n22.q1k vc_5 1083 1045 5025 5063 C 39 97.44 1126 reject_low 29 ALIGNMENT 38 YS2-20n22.q1k vc_1 1083 1043 2472 2512 C 41 97.56 1126 reject_low 18 ALIGNMENT 104 YS2-20n22.p1k chr06 119 228 101370 101479 F 110 98.18 1288 reject_low 13 ALIGNMENT 99 YS2-20n22.q1k chr06 963 855 101370 101479 C 109 97.25 1126 reject_low 16 ALIGNMENT 0 YS2-20n22.q1k vc_4 1082 62 5813 5812 C 1021 0.00 1126 reject_low 6 ALIGNMENT 36 YS2-20n22.q1k vc_4 1083 1124 126 167 F 42 95.24 1126 reject_low 4 ALIGNMENT 84 YS2-20n22.p1k chr15 119 229 980678 980790 F 111 92.79 1288 reject_low 27 ALIGNMENT 0 YS2-20n22.q1k vc_3 1042 62 2513 2512 C 981 0.00 1126 reject_low 19 ALIGNMENT 0 YS2-20n22.q1k vc_4 62 1042 5831 5830 F 981 0.00 1126 reject_low 8 ALIGNMENT 0 YS2-20n22.p1k chr12 62 103 92532 92531 F 42 0.00 1288 reject_low 9 ALIGNMENT 92 YS2-20n22.p1k chr15 119 228 301097 301205 F 110 95.45 1288 reject_low 23 ALIGNMENT 79 YS2-20n22.q1k chr15 963 854 980678 980790 C 110 91.82 1126 reject_low 28 ALIGNMENT 33 YS2-20n22.q1k vc_5 1080 1045 1 36 C 36 97.22 1126 reject_low 31 ALIGNMENT 95 YS2-20n22.q1k chr01 963 862 139154 139256 C 102 98.04 1126 reject_low 24 ALIGNMENT 0 YS2-20n22.p1k chr08 114 62 389003 389002 C 53 0.00 1288 reject_low 14 ALIGNMENT 36 YS2-20n22.q1k vc_4 1124 1083 1493 1534 C 42 95.24 1126 reject_low 5 ALIGNMENT 0 YS2-20n22.q1k vc_4 1082 62 1535 1534 C 1021 0.00 1126 reject_low 5 ALIGNMENT 890 YS2-20n22.q1k chr13 41 1025 195250 196233 F 985 97.66 1126 accept_chi 0 ALIGNMENT 0 YS2-20n22.q1k vc_5 1044 62 5064 5063 C 983 0.00 1126 reject_low 29 ALIGNMENT 0 YS2-20n22.q1k chr08 62 861 388896 388895 F 800 0.00 1126 reject_low 17 ALIGNMENT 0 YS2-20n22.p1k chr15 62 118 980678 980677 F 57 0.00 1288 reject_low 27 ALIGNMENT 0 YS2-20n22.p1k chr06 229 822 101479 101478 F 594 0.00 1288 reject_low 13 ALIGNMENT 0 YS2-20n22.q1k chr15 857 62 464557 464556 C 796 0.00 1126 reject_low 12 ALIGNMENT 0 YS2-20n22.q1k chr01 861 62 139257 139256 C 800 0.00 1126 reject_low 24 ALIGNMENT 100 YS2-20n22.p1k chr01 119 221 139154 139256 F 103 99.03 1288 reject_low 20 ALIGNMENT 0 YS2-20n22.q1k chr14 861 62 547198 547197 C 800 0.00 1126 reject_low 25 ALIGNMENT 100 YS2-20n22.p1k chr14 119 221 547095 547197 F 103 99.03 1288 reject_low 21 ALIGNMENT 101 YS2-20n22.p1k chr08 221 115 388896 389002 C 107 98.13 1288 reject_low 14 ALIGNMENT 0 YS2-20n22.p1k chr06 62 118 101370 101369 F 57 0.00 1288 reject_low 13 ALIGNMENT 883 YS2-20n22.p1k chr13 1049 56 195243 196233 C 994 97.18 1288 accept_chi 1 ALIGNMENT 103 YS2-20n22.p1k chr14 119 224 568116 568221 F 106 99.06 1288 reject_low 15 ALIGNMENT 106 YS2-20n22.q1k chr15 975 858 464439 464556 C 118 97.46 1126 reject_low 12 ALIGNMENT 36 YS2-20n22.q1k vc_3 1083 1124 2531 2572 F 42 95.24 1126 reject_low 3 ALIGNMENT 0 YS2-20n22.q1k chr06 854 62 101480 101479 C 793 0.00 1126 reject_low 16 ALIGNMENT 0 YS2-20n22.p1k chr12 229 822 92656 92655 F 594 0.00 1288 reject_low 9 ALIGNMENT 0 YS2-20n22.q1k vc_3 62 1082 2531 2530 F 1021 0.00 1126 reject_low 3 ALIGNMENT 0 YS2-20n22.p1k chr15 62 118 301097 301096 F 57 0.00 1288 reject_low 23 ALIGNMENT 96 YS2-20n22.q1k chr08 862 967 388896 389002 F 106 97.17 1126 reject_low 17 ALIGNMENT 36 YS2-20n22.q1k vc_4 1124 1083 5771 5812 C 42 95.24 1126 reject_low 6 ALIGNMENT 0 YS2-20n22.q1k vc_1 1042 62 2513 2512 C 981 0.00 1126 reject_low 18 ALIGNMENT 0 YS2-20n22.q1k chr15 854 62 301206 301205 C 793 0.00 1126 reject_low 26 ALIGNMENT 0 YS2-20n22.q1k vc_4 1084 1083 5872 6353 F 0 0.00 1126 reject_low 8 ALIGNMENT 0 YS2-20n22.q1k vc_5 1044 62 37 36 C 983 0.00 1126 reject_low 31 ALIGNMENT 36 YS2-20n22.q1k vc_1 1083 1124 2531 2572 F 42 95.24 1126 reject_low 2 ALIGNMENT 95 YS2-20n22.q1k chr14 963 862 547095 547197 C 102 98.04 1126 reject_low 25 ALIGNMENT 87 YS2-20n22.q1k chr15 963 855 301097 301205 C 109 94.50 1126 reject_low 26 ALIGNMENT 0 YS2-20n22.p1k chr01 222 822 139256 139255 F 601 0.00 1288 reject_low 20 ALIGNMENT 0 YS2-20n22.p1k chr15 62 106 464439 464438 F 45 0.00 1288 reject_low 11 ALIGNMENT 0 YS2-20n22.q1k chr15 853 62 980791 980790 C 792 0.00 1126 reject_low 28 ALIGNMENT 0 YS2-20n22.p1k chr14 222 822 547197 547196 F 601 0.00 1288 reject_low 21 ALIGNMENT 0 YS2-20n22.q1k vc_4 62 1082 126 125 F 1021 0.00 1126 reject_low 4 ALIGNMENT 0 YS2-20n22.q1k vc_5 62 1082 2398 2397 F 1021 0.00 1126 reject_low 7 ALIGNMENT 116 YS2-20n22.p1k chr12 104 228 92532 92656 F 125 97.60 1288 reject_low 9 ALIGNMENT 0 YS2-20n22.p1k chr08 822 222 388897 388896 C 601 0.00 1288 reject_low 14 ALIGNMENT 0 YS2-20n22.p1k chr01 62 118 139154 139153 F 57 0.00 1288 reject_low 20 ALIGNMENT 0 YS2-20n22.p1k chr14 62 118 547095 547094 F 57 0.00 1288 reject_low 21 ALIGNMENT 0 YS2-20n22.q1k chr14 858 62 568222 568221 C 797 0.00 1126 reject_low 22 ALIGNMENT 98 YS2-20n22.q1k chr14 963 859 568116 568221 C 105 98.10 1126 reject_low 22 ALIGNMENT 38 YS2-20n22.q1k vc_4 1043 1083 5831 5871 F 41 97.56 1126 reject_low 8 ALIGNMENT 38 YS2-20n24.q1k vc_7 331 368 63 100 F 38 100.00 368 reject_low 6 ALIGNMENT 285 YS2-20n24.q1k chr01 27 327 190008 190308 F 301 99.67 368 accept_chi 1 ALIGNMENT 0 YS2-20n24.q1k vc_3 326 62 2514 2513 C 265 0.00 368 reject_low 3 ALIGNMENT 0 YS2-20n24.q1k chr01 328 368 190308 190307 F 41 0.00 368 accept_chi 1 ALIGNMENT 42 YS2-20n24.q1k vc_4 327 368 5830 5871 F 42 100.00 368 reject_low 4 ALIGNMENT 36 YS2-20n24.q1k vc_5 365 330 1 36 C 36 100.00 368 reject_low 8 ALIGNMENT 0 YS2-20n24.q1k vc_1 326 62 2514 2513 C 265 0.00 368 reject_low 2 ALIGNMENT 0 YS2-20n24.q1k vc_5 329 62 5064 5063 C 268 0.00 368 reject_low 5 ALIGNMENT 0 YS2-20n24.p1k chr01 352 334 190009 190008 C 19 0.00 352 accept_chi 0 ALIGNMENT 38 YS2-20n24.q1k vc_7 331 368 13525 13562 F 38 100.00 368 reject_low 7 ALIGNMENT 42 YS2-20n24.q1k vc_1 368 327 2472 2513 C 42 100.00 368 reject_low 2 ALIGNMENT 39 YS2-20n24.q1k vc_5 368 330 5025 5063 C 39 100.00 368 reject_low 5 ALIGNMENT 0 YS2-20n24.q1k vc_7 62 330 63 62 F 269 0.00 368 reject_low 6 ALIGNMENT 0 YS2-20n24.q1k vc_4 62 326 5830 5829 F 265 0.00 368 reject_low 4 ALIGNMENT 42 YS2-20n24.q1k vc_3 368 327 2472 2513 C 42 100.00 368 reject_low 3 ALIGNMENT 285 YS2-20n24.p1k chr01 333 33 190008 190308 C 301 99.67 352 accept_chi 0 ALIGNMENT 0 YS2-20n24.q1k vc_5 329 62 37 36 C 268 0.00 368 reject_low 8 ALIGNMENT 0 YS2-20n24.q1k vc_7 62 330 13525 13524 F 269 0.00 368 reject_low 7 ALIGNMENT 939 YS2-20o01.p1k chr07 1129 30 53277 54367 C 1100 96.36 1317 accept 0 ALIGNMENT 1015 YS2-20o03.p1k chr07 34 1277 58109 59345 F 1244 95.10 1307 accept 0 ALIGNMENT 962 YS2-20o03.q1k chr07 1174 55 62558 63694 C 1120 97.05 1193 accept 0 ALIGNMENT 988 YS2-20o04.q1k chr16 41 1216 243775 244962 F 1176 95.58 1231 accept 0 ALIGNMENT 1017 YS2-20o04.p1k chr16 1272 31 246837 248093 C 1242 94.93 1312 accept 0 ALIGNMENT 21 YS2-20o04.q1k chr05 509 541 118578 118610 F 33 96.97 1231 reject_low 1 ALIGNMENT 0 YS2-20o04.q1k chr05 62 508 118578 118577 F 447 0.00 1231 reject_low 1 ALIGNMENT 0 YS2-20o04.q1k chr05 542 854 118610 118609 F 313 0.00 1231 reject_low 1 ALIGNMENT 878 YS2-20o06.q1k chr10 39 1177 511954 513087 F 1139 94.03 1213 accept 0 ALIGNMENT 985 YS2-20o07.q1k chr05 34 1184 512951 514090 F 1151 96.79 1187 accept 0 ALIGNMENT 29 YS2-20o07.q1k chr04 862 926 632432 632496 F 65 81.54 1187 reject_low 1 ALIGNMENT 0 YS2-20o07.q1k chr04 684 861 632254 632431 F 178 0.00 1187 reject_low 1 ALIGNMENT 96 YS2-20o07.p1k chr05 385 38 514193 514515 C 348 81.03 1434 accept 0 ALIGNMENT 78 YS2-20o07.q1k chr04 397 683 631967 632253 F 287 77.00 1187 reject_low 1 ALIGNMENT 0 YS2-20o07.q1k chr04 927 1132 632497 632711 F 206 0.00 1187 reject_low 1 ALIGNMENT 0 YS2-20o07.q1k chr04 62 396 631967 631966 F 335 0.00 1187 reject_low 1 ALIGNMENT 27 YS2-20o07.q1k chr04 1133 1171 632712 632750 F 39 92.31 1187 reject_low 1 ALIGNMENT 0 YS2-20o08.p1k vc_3 155 62 2106 2105 C 94 0.00 1391 reject_vc 2 ALIGNMENT 0 YS2-20o08.p1k vc_5 155 62 5026 5025 C 94 0.00 1391 reject_vc 3 ALIGNMENT 0 YS2-20o08.p1k vc_7 62 155 13562 13561 F 94 0.00 1391 reject_vc 5 ALIGNMENT 0 YS2-20o08.p1k vc_3 155 62 2473 2472 C 94 0.00 1391 reject_low 10 ALIGNMENT 26 YS2-20o08.p1k vc_3 186 156 2441 2472 C 31 96.77 1391 reject_low 10 ALIGNMENT 372 YS2-20o08.p1k vc_5 896 156 4285 5025 C 741 83.94 1391 reject_vc 3 ALIGNMENT 372 YS2-20o08.p1k vc_1 896 156 1365 2105 C 741 83.94 1391 reject_vc 0 ALIGNMENT 0 YS2-20o08.p1k vc_7 62 155 100 99 F 94 0.00 1391 reject_vc 4 ALIGNMENT 0 YS2-20o08.p1k vc_3 208 187 2442 2441 C 22 0.00 1391 reject_low 10 ALIGNMENT 372 YS2-20o08.p1k vc_3 896 156 1365 2105 C 741 83.94 1391 reject_vc 2 ALIGNMENT 0 YS2-20o08.p1k vc_1 155 62 2106 2105 C 94 0.00 1391 reject_vc 0 ALIGNMENT 0 YS2-20o08.p1k vc_4 62 155 5871 5870 F 94 0.00 1391 reject_low 8 ALIGNMENT 26 YS2-20o08.p1k vc_1 186 156 2441 2472 C 31 96.77 1391 reject_low 9 ALIGNMENT 0 YS2-20o08.p1k chr04 208 139 26145 26144 C 70 0.00 1391 reject_low 6 ALIGNMENT 0 YS2-20o08.p1k vc_2 155 62 2106 2105 C 94 0.00 1391 reject_vc 1 ALIGNMENT 366 YS2-20o08.p1k vc_7 156 896 100 840 F 741 83.67 1391 reject_vc 4 ALIGNMENT 187 YS2-20o08.p1k vc_4 156 495 5871 6211 F 340 85.29 1391 reject_low 8 ALIGNMENT 93 YS2-20o08.p1k chr04 138 31 26144 26252 C 108 97.22 1391 reject_low 6 ALIGNMENT 372 YS2-20o08.p1k vc_2 896 156 1365 2105 C 741 83.94 1391 reject_vc 1 ALIGNMENT 0 YS2-20o08.p1k vc_6 62 502 3704 3703 F 441 0.00 1391 reject_low 7 ALIGNMENT 366 YS2-20o08.p1k vc_7 156 896 13562 14302 F 741 83.67 1391 reject_vc 5 ALIGNMENT 0 YS2-20o08.p1k vc_1 208 187 2442 2441 C 22 0.00 1391 reject_low 9 ALIGNMENT 0 YS2-20o08.p1k vc_1 155 62 2473 2472 C 94 0.00 1391 reject_low 9 ALIGNMENT 191 YS2-20o08.p1k vc_6 503 896 3704 4096 F 394 83.50 1391 reject_low 7 ALIGNMENT 981 YS2-20o09.q1k chr08 41 1143 340225 341336 F 1103 97.01 1149 accept 0 ALIGNMENT 878 YS2-20o09.p1k chr08 1208 28 343602 344773 C 1181 93.23 1307 accept 0 ALIGNMENT 0 YS2-20o10.q1k chr07 897 62 115597 115596 C 836 0.00 1224 reject_low 1 ALIGNMENT 63 YS2-20o10.q1k chr16 902 990 769200 769288 F 89 88.76 1224 reject_low 6 ALIGNMENT 0 YS2-20o10.q1k chr04 895 62 359685 359684 C 834 0.00 1224 reject_low 2 ALIGNMENT 0 YS2-20o10.q1k chr15 901 62 438745 438744 C 840 0.00 1224 reject_low 5 ALIGNMENT 65 YS2-20o10.q1k chr04 990 896 359589 359684 C 95 88.42 1224 reject_low 2 ALIGNMENT 0 YS2-20o10.q1k chr16 62 901 769200 769199 F 840 0.00 1224 reject_low 6 ALIGNMENT 63 YS2-20o10.q1k chr12 990 902 875387 875475 C 89 88.76 1224 reject_low 4 ALIGNMENT 67 YS2-20o10.q1k chr07 990 898 115504 115596 C 93 89.25 1224 reject_low 1 ALIGNMENT 1007 YS2-20o10.p1k chr07 1194 34 703466 704637 C 1161 96.99 1322 accept 0 ALIGNMENT 966 YS2-20o10.q1k chr07 52 1208 700101 701265 F 1157 95.16 1224 accept 0 ALIGNMENT 0 YS2-20o10.q1k chr11 901 62 578708 578707 C 840 0.00 1224 reject_low 3 ALIGNMENT 0 YS2-20o10.q1k chr12 901 62 875476 875475 C 840 0.00 1224 reject_low 4 ALIGNMENT 63 YS2-20o10.q1k chr15 990 902 438656 438744 C 89 88.76 1224 reject_low 5 ALIGNMENT 63 YS2-20o10.q1k chr11 990 902 578619 578707 C 89 88.76 1224 reject_low 3 ALIGNMENT 991 YS2-20o11.p1k chr02 1289 41 409910 411153 C 1249 94.40 1328 accept 0 ALIGNMENT 1023 YS2-20o11.q1k chr02 48 1167 409479 410596 F 1120 97.77 1167 accept 0 ALIGNMENT 1030 YS2-20o12.p1k chr07 1173 34 942435 943586 C 1140 97.54 1335 accept 0 ALIGNMENT 985 YS2-20o12.q1k chr07 41 1168 939697 940830 F 1128 97.16 1183 accept 0 ALIGNMENT 984 YS2-20o14.q1k chr04 49 1165 1066107 1067237 F 1117 97.22 1172 accept 0 ALIGNMENT 986 YS2-20o14.p1k chr04 1246 33 1068765 1069972 C 1214 95.96 1322 accept 0 ALIGNMENT 656 YS2-20o15.p1k chr11 862 33 563271 564099 C 830 95.06 1358 accept 0 ALIGNMENT 884 YS2-20o15.q1k chr11 52 1041 559787 560774 F 990 97.17 1156 accept 0 ALIGNMENT 0 YS2-20o16.q1k vc_5 365 62 5064 5063 C 304 0.00 404 reject_low 13 ALIGNMENT 41 YS2-20o16.q1k vc_2 404 364 2105 2145 C 41 100.00 404 reject_low 10 ALIGNMENT 295 YS2-20o16.q1k chr13 47 364 618067 618384 F 318 99.69 404 accept 0 ALIGNMENT 41 YS2-20o16.q1k vc_1 404 364 2472 2512 C 41 100.00 404 reject_low 9 ALIGNMENT 0 YS2-20o16.q1k chr13 365 404 618384 618383 F 40 0.00 404 accept 0 ALIGNMENT 0 YS2-20o16.q1k vc_5 365 62 37 36 C 304 0.00 404 reject_low 15 ALIGNMENT 36 YS2-20o16.q1k vc_5 401 366 1 36 C 36 100.00 404 reject_low 15 ALIGNMENT 193 YS2-20o16.p1k vc_7 1 325 330 641 F 325 89.23 826 reject_vc 6 ALIGNMENT 193 YS2-20o16.p1k vc_7 1 325 13792 14103 F 325 89.23 826 reject_vc 7 ALIGNMENT 0 YS2-20o16.q1k vc_2 363 62 2146 2145 C 302 0.00 404 reject_low 10 ALIGNMENT 39 YS2-20o16.q1k vc_5 404 366 5025 5063 C 39 100.00 404 reject_low 13 ALIGNMENT 0 YS2-20o16.q1k vc_4 62 363 5831 5830 F 302 0.00 404 reject_low 12 ALIGNMENT 0 YS2-20o16.q1k vc_1 363 62 2513 2512 C 302 0.00 404 reject_low 9 ALIGNMENT 41 YS2-20o16.q1k vc_3 404 364 2472 2512 C 41 100.00 404 reject_low 11 ALIGNMENT 41 YS2-20o16.q1k vc_4 364 404 5831 5871 F 41 100.00 404 reject_low 12 ALIGNMENT 96 YS2-20o16.p1k vc_4 1 123 6101 6223 F 123 92.68 826 reject_low 8 ALIGNMENT 193 YS2-20o16.p1k vc_2 325 1 1564 1875 C 325 89.23 826 reject_vc 2 ALIGNMENT 193 YS2-20o16.p1k vc_3 325 1 1564 1875 C 325 89.23 826 reject_vc 3 ALIGNMENT 0 YS2-20o16.q1k vc_7 62 366 13525 13524 F 305 0.00 404 reject_low 14 ALIGNMENT 38 YS2-20o16.q1k vc_7 367 404 13525 13562 F 38 100.00 404 reject_low 14 ALIGNMENT 193 YS2-20o16.p1k vc_5 325 1 4484 4795 C 325 89.23 826 reject_vc 4 ALIGNMENT 193 YS2-20o16.p1k vc_1 325 1 1564 1875 C 325 89.23 826 reject_vc 1 ALIGNMENT 193 YS2-20o16.p1k vc_6 1 325 3586 3897 F 325 89.23 826 reject_vc 5 ALIGNMENT 0 YS2-20o16.q1k vc_3 363 62 2513 2512 C 302 0.00 404 reject_low 11 ALIGNMENT 408 YS2-20o17.q1k chr05 9 569 117115 117673 F 561 92.87 657 accept 0 ALIGNMENT 1002 YS2-20o17.p1k chr05 1219 35 120184 121374 C 1185 96.29 1282 accept 0 ALIGNMENT 926 YS2-20o18.p1k chr04 35 1061 170825 171849 F 1027 97.86 1344 accept_chi 0 ALIGNMENT 916 YS2-20o18.q1k chr04 1057 31 170825 171851 C 1027 96.98 1180 accept_chi 1 ALIGNMENT 38 YS2-20o19.q1k vc_7 186 223 13525 13562 F 38 100.00 223 reject_low 6 ALIGNMENT 41 YS2-20o19.q1k vc_3 223 183 2472 2512 C 41 100.00 223 reject_low 3 ALIGNMENT 0 YS2-20o19.q1k vc_5 184 62 5064 5063 C 123 0.00 223 reject_low 5 ALIGNMENT 41 YS2-20o19.q1k vc_2 223 183 2105 2145 C 41 100.00 223 reject_low 2 ALIGNMENT 0 YS2-20o19.q1k vc_5 184 62 37 36 C 123 0.00 223 reject_low 7 ALIGNMENT 41 YS2-20o19.q1k vc_4 183 223 5831 5871 F 41 100.00 223 reject_low 4 ALIGNMENT 0 YS2-20o19.q1k vc_3 182 62 2513 2512 C 121 0.00 223 reject_low 3 ALIGNMENT 0 YS2-20o19.q1k vc_7 62 185 13525 13524 F 124 0.00 223 reject_low 6 ALIGNMENT 0 YS2-20o19.q1k vc_4 62 182 5831 5830 F 121 0.00 223 reject_low 4 ALIGNMENT 0 YS2-20o19.q1k vc_1 182 62 2513 2512 C 121 0.00 223 reject_low 1 ALIGNMENT 36 YS2-20o19.q1k vc_5 220 185 1 36 C 36 100.00 223 reject_low 7 ALIGNMENT 39 YS2-20o19.q1k vc_5 223 185 5025 5063 C 39 100.00 223 reject_low 5 ALIGNMENT 0 YS2-20o19.q1k chr14 183 223 553465 553464 F 41 0.00 223 accept 0 ALIGNMENT 0 YS2-20o19.q1k vc_2 182 62 2146 2145 C 121 0.00 223 reject_low 2 ALIGNMENT 136 YS2-20o19.q1k chr14 38 182 553321 553465 F 145 97.93 223 accept 0 ALIGNMENT 41 YS2-20o19.q1k vc_1 223 183 2472 2512 C 41 100.00 223 reject_low 1 ALIGNMENT 433 YS2-20o20.p1k vc_5 627 1 4058 4669 C 627 91.23 780 reject_vc 1 ALIGNMENT 0 YS2-20o20.q1k chr14 181 221 553465 553464 F 41 0.00 221 accept 0 ALIGNMENT 0 YS2-20o20.q1k vc_3 180 62 2513 2512 C 119 0.00 221 reject_low 10 ALIGNMENT 430 YS2-20o20.p1k vc_3 627 1 1138 1749 C 627 91.07 780 reject_vc 5 ALIGNMENT 433 YS2-20o20.p1k vc_6 1 627 3712 4323 F 627 91.23 780 reject_vc 2 ALIGNMENT 41 YS2-20o20.q1k vc_2 221 181 2105 2145 C 41 100.00 221 reject_low 9 ALIGNMENT 41 YS2-20o20.q1k vc_1 221 181 2472 2512 C 41 100.00 221 reject_low 8 ALIGNMENT 424 YS2-20o20.p1k vc_7 1 627 456 1067 F 627 90.75 780 reject_vc 6 ALIGNMENT 0 YS2-20o20.q1k vc_1 180 62 2513 2512 C 119 0.00 221 reject_low 8 ALIGNMENT 145 YS2-20o20.q1k chr14 36 180 553321 553465 F 145 100.00 221 accept 0 ALIGNMENT 430 YS2-20o20.p1k vc_1 627 1 1138 1749 C 627 91.07 780 reject_vc 3 ALIGNMENT 41 YS2-20o20.q1k vc_3 221 181 2472 2512 C 41 100.00 221 reject_low 10 ALIGNMENT 36 YS2-20o20.q1k vc_5 218 183 1 36 C 36 100.00 221 reject_low 14 ALIGNMENT 0 YS2-20o20.q1k vc_7 62 183 13525 13524 F 122 0.00 221 reject_low 13 ALIGNMENT 0 YS2-20o20.q1k vc_2 180 62 2146 2145 C 119 0.00 221 reject_low 9 ALIGNMENT 38 YS2-20o20.q1k vc_7 184 221 13525 13562 F 38 100.00 221 reject_low 13 ALIGNMENT 424 YS2-20o20.p1k vc_7 1 627 13918 14529 F 627 90.75 780 reject_vc 7 ALIGNMENT 0 YS2-20o20.q1k vc_4 62 180 5831 5830 F 119 0.00 221 reject_low 11 ALIGNMENT 41 YS2-20o20.q1k vc_4 181 221 5831 5871 F 41 100.00 221 reject_low 11 ALIGNMENT 0 YS2-20o20.q1k vc_5 182 62 5064 5063 C 121 0.00 221 reject_low 12 ALIGNMENT 39 YS2-20o20.q1k vc_5 221 183 5025 5063 C 39 100.00 221 reject_low 12 ALIGNMENT 0 YS2-20o20.q1k vc_5 182 62 37 36 C 121 0.00 221 reject_low 14 ALIGNMENT 430 YS2-20o20.p1k vc_2 627 1 1138 1749 C 627 91.07 780 reject_vc 4 ALIGNMENT 911 YS2-20o21.p1k chr15 34 1177 94637 95760 F 1144 95.28 1276 accept 0 ALIGNMENT 850 YS2-20o21.q1k chr15 1028 43 97681 98669 C 986 96.55 1116 accept 0 ALIGNMENT 576 YS2-20o22.q1k chr12 25 662 458723 459361 F 638 98.75 662 accept 0 ALIGNMENT 0 YS2-20o22.q1k chr06 608 62 31730 31729 C 547 0.00 662 reject_low 2 ALIGNMENT 47 YS2-20o22.q1k chr06 662 609 31676 31729 C 54 98.15 662 reject_low 2 ALIGNMENT 576 YS2-20o22.q1k chr12 25 662 467860 468498 F 638 98.75 662 accept 1 ALIGNMENT 900 YS2-20o23.q1k chr15 1056 44 656093 657107 C 1013 96.94 1073 accept 0 ALIGNMENT 0 YS2-20o23.p1k chr15 62 262 650920 650919 F 201 0.00 1235 accept 0 ALIGNMENT 220 YS2-20o23.p1k chr02 35 264 144039 144269 F 230 99.13 1235 reject_low 1 ALIGNMENT 707 YS2-20o23.p1k chr15 263 1084 650920 651739 F 822 96.96 1235 accept 0 ALIGNMENT 0 YS2-20o23.p1k chr02 265 787 144269 144268 F 523 0.00 1235 reject_low 1 ALIGNMENT 42 YS2-20o24.q1k vc_2 292 251 2105 2146 C 42 100.00 292 reject_low 4 ALIGNMENT 206 YS2-20o24.q1k chr12 251 30 455268 455487 C 222 99.10 292 reject_low 1 ALIGNMENT 39 YS2-20o24.q1k vc_5 292 254 5025 5063 C 39 100.00 292 reject_low 7 ALIGNMENT 203 YS2-20o24.p1k chr12 38 256 455271 455487 F 219 99.09 275 accept 0 ALIGNMENT 0 YS2-20o24.q1k chr12 292 252 464406 464405 C 41 0.00 292 accept 0 ALIGNMENT 0 YS2-20o24.p1k chr12 257 275 455487 455486 F 19 0.00 275 accept 0 ALIGNMENT 38 YS2-20o24.q1k vc_7 255 292 13525 13562 F 38 100.00 292 reject_low 8 ALIGNMENT 0 YS2-20o24.q1k vc_3 250 62 2514 2513 C 189 0.00 292 reject_low 5 ALIGNMENT 0 YS2-20o24.q1k vc_7 62 254 13525 13524 F 193 0.00 292 reject_low 8 ALIGNMENT 0 YS2-20o24.q1k chr12 292 252 455269 455268 C 41 0.00 292 reject_low 1 ALIGNMENT 203 YS2-20o24.p1k chr12 38 256 464408 464624 F 219 99.09 275 reject_low 2 ALIGNMENT 42 YS2-20o24.q1k vc_3 292 251 2472 2513 C 42 100.00 292 reject_low 5 ALIGNMENT 42 YS2-20o24.q1k vc_1 292 251 2472 2513 C 42 100.00 292 reject_low 3 ALIGNMENT 36 YS2-20o24.q1k vc_5 289 254 1 36 C 36 100.00 292 reject_low 9 ALIGNMENT 42 YS2-20o24.q1k vc_4 251 292 5830 5871 F 42 100.00 292 reject_low 6 ALIGNMENT 0 YS2-20o24.q1k vc_5 253 62 37 36 C 192 0.00 292 reject_low 9 ALIGNMENT 0 YS2-20o24.q1k vc_1 250 62 2514 2513 C 189 0.00 292 reject_low 3 ALIGNMENT 0 YS2-20o24.q1k vc_5 253 62 5064 5063 C 192 0.00 292 reject_low 7 ALIGNMENT 206 YS2-20o24.q1k chr12 251 30 464405 464624 C 222 99.10 292 accept 0 ALIGNMENT 0 YS2-20o24.q1k vc_4 62 250 5830 5829 F 189 0.00 292 reject_low 6 ALIGNMENT 0 YS2-20o24.q1k vc_2 250 62 2147 2146 C 189 0.00 292 reject_low 4 ALIGNMENT 0 YS2-20o24.p1k chr12 257 275 464624 464623 F 19 0.00 275 reject_low 2 ALIGNMENT 0 YS2-20p01.q1k chr04 837 508 644184 644183 C 330 0.00 1163 reject_low 1 ALIGNMENT 1007 YS2-20p01.p1k chr05 37 1212 533894 535076 F 1176 96.17 1298 accept 0 ALIGNMENT 909 YS2-20p01.q1k chr05 1079 38 537879 538906 C 1042 97.41 1163 accept 0 ALIGNMENT 109 YS2-20p01.q1k chr04 507 181 644183 644509 C 327 78.59 1163 reject_low 1 ALIGNMENT 0 YS2-20p01.q1k chr04 180 62 644510 644509 C 119 0.00 1163 reject_low 1 ALIGNMENT 291 YS2-20p02.q1k chr02 52 573 391158 391671 F 522 87.36 1351 accept 0 ALIGNMENT 917 YS2-20p02.p1k chr02 1232 30 394383 395592 C 1203 93.93 1311 accept 0 ALIGNMENT 780 YS2-20p05.p1k chr14 27 1078 535521 536570 F 1052 92.49 1357 accept 0 ALIGNMENT 0 YS2-20p06.p1k chr12 62 364 35527 35526 F 303 0.00 1330 reject_low 1 ALIGNMENT 1006 YS2-20p06.q1k chr16 40 1175 919817 920957 F 1136 96.92 1224 accept 0 ALIGNMENT 191 YS2-20p06.p1k chr12 365 1075 35527 36228 F 711 76.65 1330 reject_low 1 ALIGNMENT 1029 YS2-20p06.p1k chr16 1222 32 921830 923034 C 1191 96.39 1330 accept 0 ALIGNMENT 977 YS2-20p07.p1k chr14 31 1121 509237 510341 F 1091 98.08 1288 accept_chi 0 ALIGNMENT 628 YS2-20p07.q1k chr11 1152 76 244084 245150 C 1077 87.28 1286 accept_chi 1 ALIGNMENT 1001 YS2-20p08.q1k chr08 52 1231 403439 404618 F 1180 95.51 1249 accept 0 ALIGNMENT 867 YS2-20p08.p1k chr08 1079 36 405983 407040 C 1044 96.46 1285 accept 0 ALIGNMENT 32 YS2-20p09.q1k vc_4 742 773 5831 5862 F 32 100.00 773 reject_low 4 ALIGNMENT 657 YS2-20p09.q1k chr15 51 741 1014779 1015469 F 691 99.71 773 accept_chi 1 ALIGNMENT 32 YS2-20p09.q1k vc_1 773 742 2481 2512 C 32 100.00 773 reject_low 2 ALIGNMENT 32 YS2-20p09.q1k vc_3 773 742 2481 2512 C 32 100.00 773 reject_low 3 ALIGNMENT 29 YS2-20p09.q1k vc_7 745 773 13525 13553 F 29 100.00 773 reject_low 5 ALIGNMENT 657 YS2-20p09.p1k chr15 724 34 1014779 1015469 C 691 99.71 724 accept_chi 0 ALIGNMENT 0 YS2-20p09.q1k vc_3 741 62 2513 2512 C 680 0.00 773 reject_low 3 ALIGNMENT 0 YS2-20p09.q1k vc_1 741 62 2513 2512 C 680 0.00 773 reject_low 2 ALIGNMENT 0 YS2-20p09.q1k vc_7 62 744 13525 13524 F 683 0.00 773 reject_low 5 ALIGNMENT 0 YS2-20p09.q1k vc_4 62 741 5831 5830 F 680 0.00 773 reject_low 4 ALIGNMENT 0 YS2-20p09.q1k chr15 742 773 1015469 1015468 F 32 0.00 773 accept_chi 1 ALIGNMENT 80 YS2-20p10.q1k chr13 1069 885 609467 609652 C 185 81.08 1227|10,0 reject_low 5 ALIGNMENT 0 YS2-20p10.q1k chr13 761 62 609206 609205 C 700 0.00 1227 reject_low 8 ALIGNMENT 862 YS2-20p10.q1k chr13 1116 40 609579 610653 C 1077 94.24 1227 accept 0 ALIGNMENT 0 YS2-20p10.q1k chr13 1004 948 609223 609400 C 57 0.00 1227 reject_low 2 ALIGNMENT 83 YS2-20p10.q1k chr13 947 801 609401 609547 C 147 85.03 1227 reject_low 2 ALIGNMENT 0 YS2-20p10.q1k chr13 860 62 609596 609595 C 799 0.00 1227 reject_low 1 ALIGNMENT 0 YS2-20p10.q1k chr13 832 788 609159 609179 C 45 0.00 1227 reject_low 8 ALIGNMENT 0 YS2-20p10.q1k chr13 1066 1067 609341 609733 C 0 0.00 1227 reject_low 7 ALIGNMENT 20 YS2-20p10.q1k chr13 787 762 609180 609205 C 26 92.31 1227 reject_low 8 ALIGNMENT 0 YS2-20p10.q1k chr13 1059 1060 609040 609476 C 0 0.00 1227 reject_low 5 ALIGNMENT 20 YS2-20p10.q1k chr13 1077 1055 609330 609352 C 23 95.65 1227|0,12 reject_low 7 ALIGNMENT 78 YS2-20p10.q1k chr13 947 833 609044 609158 C 115 88.70 1227 reject_low 8 ALIGNMENT 0 YS2-20p10.q1k chr13 1049 991 609050 609026 C 59 0.00 1227 reject_low 8 ALIGNMENT 21 YS2-20p10.q1k chr13 869 840 609224 609253 C 30 90.00 1227 reject_low 6 ALIGNMENT 0 YS2-20p10.q1k chr13 1062 1063 609037 609164 C 0 0.00 1227 reject_low 2 ALIGNMENT 21 YS2-20p10.q1k chr13 1077 1050 609723 609751 C 28 92.86 1227|11,0 reject_low 7 ALIGNMENT 0 YS2-20p10.q1k chr13 823 62 609942 609941 C 762 0.00 1227 reject_low 3,4,5 ALIGNMENT 0 YS2-20p10.q1k chr13 958 948 609059 609043 C 11 0.00 1227 reject_low 8 ALIGNMENT 22 YS2-20p10.q1k chr13 1149 1050 608953 609049 C 100 75.00 1227|0,10 reject_low 2,5,8 ALIGNMENT 0 YS2-20p10.q1k chr13 1049 62 609752 609751 C 988 0.00 1227 reject_low 7 ALIGNMENT 20 YS2-20p10.q1k chr13 964 861 609488 609595 C 104 74.04 1227 reject_low 1 ALIGNMENT 29 YS2-20p10.q1k chr13 859 824 609906 609941 C 36 94.44 1227 reject_low 3,4,5 ALIGNMENT 0 YS2-20p10.q1k chr13 968 860 609806 609905 C 109 0.00 1227 reject_low 4 ALIGNMENT 20 YS2-20p10.q1k chr13 990 959 609027 609058 C 32 90.62 1227 reject_low 6,8 ALIGNMENT 0 YS2-20p10.q1k chr13 800 62 609548 609547 C 739 0.00 1227 reject_low 2 ALIGNMENT 48 YS2-20p10.q1k chr13 1122 1040 609729 609814 C 83 86.75 1227 reject_low 3 ALIGNMENT 0 YS2-20p10.q1k chr13 839 62 609254 609253 C 778 0.00 1227 reject_low 6 ALIGNMENT 0 YS2-20p10.q1k chr13 1039 860 609815 609905 C 180 0.00 1227 reject_low 3 ALIGNMENT 35 YS2-20p10.q1k chr13 1074 1005 609153 609222 C 70 84.29 1227|12,0 reject_low 2 ALIGNMENT 0 YS2-20p10.q1k chr13 884 860 609653 609905 C 25 0.00 1227 reject_low 5 ALIGNMENT 39 YS2-20p10.q1k chr13 1124 969 609649 609805 C 156 76.92 1227 reject_low 4 ALIGNMENT 0 YS2-20p10.q1k chr13 958 870 609059 609223 C 89 0.00 1227 reject_low 6 ALIGNMENT 1114 YS2-20p10.p1k chr13 34 1356 605801 607121 F 1323 95.62 1356 accept 0 ALIGNMENT 441 YS2-20p11.p1k chr12 29 482 490089 490543 F 454 99.34 1346 reject_low 2 ALIGNMENT 1058 YS2-20p11.p1k chr12 29 1301 461258 462530 F 1273 95.05 1346 accept 1 ALIGNMENT 1058 YS2-20p11.p1k chr12 29 1301 452121 453393 F 1273 95.05 1346 accept 0 ALIGNMENT 137 YS2-20p11.q1k chr12 1099 897 490332 490543 C 203 89.16 1154 reject_low 2 ALIGNMENT 0 YS2-20p11.q1k chr12 896 62 490544 490543 C 835 0.00 1154 reject_low 2 ALIGNMENT 0 YS2-20p11.p1k chr12 483 840 490543 490542 F 358 0.00 1346 reject_low 2 ALIGNMENT 980 YS2-20p11.q1k chr12 1099 32 461501 462578 C 1068 97.38 1154 accept 1 ALIGNMENT 980 YS2-20p11.q1k chr12 1099 32 452364 453441 C 1068 97.38 1154 accept 0 ALIGNMENT 0 YS2-20p12.q1k chr09 344 855 357252 357251 F 512 0.00 1182 reject_low 1 ALIGNMENT 745 YS2-20p12.q1k chr13 1166 341 888093 888917 C 826 97.58 1182 accept 0 ALIGNMENT 0 YS2-20p12.q1k chr13 340 62 888918 888917 C 279 0.00 1182 accept 0 ALIGNMENT 918 YS2-20p12.p1k chr13 34 1066 885153 886176 F 1033 98.16 1438 accept 0 ALIGNMENT 290 YS2-20p12.q1k chr09 37 343 356946 357252 F 307 99.67 1182 reject_low 1 ALIGNMENT 304 YS2-20p13.p1k vc_7 1 447 456 896 F 447 90.38 788 reject_low 5 ALIGNMENT 311 YS2-20p13.p1k vc_3 477 1 1282 1749 C 477 89.73 788 reject_vc 2 ALIGNMENT 304 YS2-20p13.p1k vc_7 1 447 13918 14358 F 447 90.38 788 reject_low 6 ALIGNMENT 311 YS2-20p13.p1k vc_1 477 1 1282 1749 C 477 89.73 788 reject_vc 0 ALIGNMENT 311 YS2-20p13.p1k vc_2 477 1 1282 1749 C 477 89.73 788 reject_vc 1 ALIGNMENT 310 YS2-20p13.p1k vc_6 1 447 3712 4152 F 447 90.83 788 reject_low 4 ALIGNMENT 311 YS2-20p13.p1k vc_5 477 1 4202 4669 C 477 89.73 788 reject_vc 3 ALIGNMENT 36 YS2-20p14.q1k vc_5 247 212 1 36 C 36 100.00 250 reject_low 7 ALIGNMENT 41 YS2-20p14.q1k vc_3 250 210 2472 2512 C 41 100.00 250 reject_low 3 ALIGNMENT 0 YS2-20p14.q1k vc_5 211 62 37 36 C 150 0.00 250 reject_low 7 ALIGNMENT 0 YS2-20p14.q1k vc_3 209 62 2513 2512 C 148 0.00 250 reject_low 3 ALIGNMENT 41 YS2-20p14.q1k vc_1 250 210 2472 2512 C 41 100.00 250 reject_low 2 ALIGNMENT 149 YS2-20p14.q1k chr05 50 210 268892 269052 F 161 98.76 250 accept_chi 1 ALIGNMENT 0 YS2-20p14.p1k chr05 215 198 268893 268892 C 18 0.00 215 accept_chi 0 ALIGNMENT 149 YS2-20p14.p1k chr05 197 37 268892 269052 C 161 98.76 215 accept_chi 0 ALIGNMENT 38 YS2-20p14.q1k vc_7 213 250 13525 13562 F 38 100.00 250 reject_low 6 ALIGNMENT 0 YS2-20p14.q1k vc_7 62 212 13525 13524 F 151 0.00 250 reject_low 6 ALIGNMENT 0 YS2-20p14.q1k vc_1 209 62 2513 2512 C 148 0.00 250 reject_low 2 ALIGNMENT 0 YS2-20p14.q1k vc_4 62 209 5831 5830 F 148 0.00 250 reject_low 4 ALIGNMENT 39 YS2-20p14.q1k vc_5 250 212 5025 5063 C 39 100.00 250 reject_low 5 ALIGNMENT 0 YS2-20p14.q1k chr05 211 250 269052 269051 F 40 0.00 250 accept_chi 1 ALIGNMENT 0 YS2-20p14.q1k vc_5 211 62 5064 5063 C 150 0.00 250 reject_low 5 ALIGNMENT 41 YS2-20p14.q1k vc_4 210 250 5831 5871 F 41 100.00 250 reject_low 4 ALIGNMENT 41 YS2-20p15.q1k vc_4 353 393 5831 5871 F 41 100.00 393 reject_low 4 ALIGNMENT 0 YS2-20p15.q1k vc_5 354 62 37 36 C 293 0.00 393 reject_low 7 ALIGNMENT 41 YS2-20p15.q1k vc_2 393 353 2105 2145 C 41 100.00 393 reject_low 2 ALIGNMENT 0 YS2-20p15.q1k vc_5 354 62 5064 5063 C 293 0.00 393 reject_low 5 ALIGNMENT 0 YS2-20p15.q1k chr13 354 393 618384 618383 F 40 0.00 393 accept 0 ALIGNMENT 0 YS2-20p15.q1k vc_7 62 355 13525 13524 F 294 0.00 393 reject_low 6 ALIGNMENT 36 YS2-20p15.q1k vc_5 390 355 1 36 C 36 100.00 393 reject_low 7 ALIGNMENT 287 YS2-20p15.q1k chr13 36 353 618067 618384 F 318 98.74 393 accept 0 ALIGNMENT 41 YS2-20p15.q1k vc_3 393 353 2472 2512 C 41 100.00 393 reject_low 3 ALIGNMENT 0 YS2-20p15.q1k vc_3 352 62 2513 2512 C 291 0.00 393 reject_low 3 ALIGNMENT 0 YS2-20p15.q1k vc_4 62 352 5831 5830 F 291 0.00 393 reject_low 4 ALIGNMENT 39 YS2-20p15.q1k vc_5 393 355 5025 5063 C 39 100.00 393 reject_low 5 ALIGNMENT 0 YS2-20p15.q1k vc_2 352 62 2146 2145 C 291 0.00 393 reject_low 2 ALIGNMENT 38 YS2-20p15.q1k vc_7 356 393 13525 13562 F 38 100.00 393 reject_low 6 ALIGNMENT 0 YS2-20p15.q1k vc_1 352 62 2513 2512 C 291 0.00 393 reject_low 1 ALIGNMENT 41 YS2-20p15.q1k vc_1 393 353 2472 2512 C 41 100.00 393 reject_low 1 ALIGNMENT 1025 YS2-20p17.p1k chr04 1238 32 444505 445711 C 1207 96.19 1282 accept 0 ALIGNMENT 937 YS2-20p19.q1k chr16 1117 39 626949 628037 C 1079 96.20 1192 accept 0 ALIGNMENT 939 YS2-20p19.p1k chr16 26 1152 623825 624968 F 1127 95.56 1238 accept 0 ALIGNMENT 41 YS2-20p20.q1k vc_4 242 282 5831 5871 F 41 100.00 282 reject_low 4 ALIGNMENT 38 YS2-20p20.q1k vc_7 245 282 13525 13562 F 38 100.00 282 reject_low 6 ALIGNMENT 0 YS2-20p20.q1k vc_3 241 62 2513 2512 C 180 0.00 282 reject_low 3 ALIGNMENT 193 YS2-20p20.q1k chr07 38 241 88674 88877 F 204 99.02 282 accept_chi 0 ALIGNMENT 39 YS2-20p20.q1k vc_5 282 244 5025 5063 C 39 100.00 282 reject_low 5 ALIGNMENT 0 YS2-20p20.q1k vc_5 243 62 37 36 C 182 0.00 282 reject_low 7 ALIGNMENT 0 YS2-20p20.q1k vc_1 241 62 2513 2512 C 180 0.00 282 reject_low 2 ALIGNMENT 36 YS2-20p20.q1k vc_5 279 244 1 36 C 36 100.00 282 reject_low 7 ALIGNMENT 41 YS2-20p20.q1k vc_1 282 242 2472 2512 C 41 100.00 282 reject_low 2 ALIGNMENT 188 YS2-20p20.p1k chr07 237 35 88674 88877 C 203 98.52 255 accept_chi 1 ALIGNMENT 0 YS2-20p20.p1k chr07 255 238 88675 88674 C 18 0.00 255 accept_chi 1 ALIGNMENT 0 YS2-20p20.q1k vc_4 62 241 5831 5830 F 180 0.00 282 reject_low 4 ALIGNMENT 0 YS2-20p20.q1k vc_5 243 62 5064 5063 C 182 0.00 282 reject_low 5 ALIGNMENT 0 YS2-20p20.q1k vc_7 62 244 13525 13524 F 183 0.00 282 reject_low 6 ALIGNMENT 0 YS2-20p20.q1k chr07 242 282 88877 88876 F 41 0.00 282 accept_chi 0 ALIGNMENT 41 YS2-20p20.q1k vc_3 282 242 2472 2512 C 41 100.00 282 reject_low 3 ALIGNMENT 896 YS2-20p21.q1k chr01 28 1106 74522 75607 F 1079 95.37 1137 accept 0 ALIGNMENT 910 YS2-20p21.p1k chr01 1142 36 77815 78910 C 1107 95.66 1283 accept 0 ALIGNMENT 0 YS2-20p24.p1k chr03 423 405 125571 125570 C 19 0.00 423 accept 0 ALIGNMENT 355 YS2-20p24.p1k chr03 404 32 125570 125942 C 373 99.73 423 accept 0 ALIGNMENT 762 YS2-2a02.p1k chr09 1274 280 424243 425238 C 995 92.96 1301 reject_bad_break 0 ALIGNMENT 0 YS2-2a02.p1k chr09 279 249 425239 425236 C 31 0.00 1301 reject_bad_break 0 ALIGNMENT 190 YS2-2a02.p1k chr09 248 36 425237 425449 C 213 97.65 1301 reject_bad_break 0 ALIGNMENT 1018 YS2-2a03.p1k chr16 1274 34 68636 69891 C 1241 95.25 1293 accept 0 ALIGNMENT 38 YS2-2a04.q1k vc_5 321 284 5025 5062 C 38 100.00 1393 reject_low 13 ALIGNMENT 38 YS2-2a04.q1k vc_4 284 321 5834 5871 F 38 100.00 1393 reject_low 8 ALIGNMENT 204 YS2-2a04.q1k vc_2 322 710 2164 2545 F 389 86.63 1393 reject_low 4 ALIGNMENT 0 YS2-2a04.p1k chr13 284 300 691457 691456 F 17 0.00 300 accept_chi 0 ALIGNMENT 38 YS2-2a04.q1k vc_7 284 321 13525 13562 F 38 100.00 1393 reject_low 14 ALIGNMENT 246 YS2-2a04.p1k chr13 32 283 691206 691457 F 252 100.00 300 accept_chi 0 ALIGNMENT 204 YS2-2a04.q1k vc_1 322 710 2531 2912 F 389 86.63 1393 reject_low 3 ALIGNMENT 124 YS2-2a04.q1k vc_4 322 483 6353 6514 F 162 93.21 1393 reject_low 8 ALIGNMENT 0 YS2-2a04.q1k vc_4 322 321 5872 6352 F 0 0.00 1393 reject_low 8 ALIGNMENT 204 YS2-2a04.q1k vc_7 710 322 2346 2727 C 389 86.63 1393 reject_low 7 ALIGNMENT 204 YS2-2a04.q1k vc_3 322 710 2531 2912 F 389 86.63 1393 reject_low 5 ALIGNMENT 207 YS2-2a04.q1k chr13 281 34 691206 691456 C 248 96.37 1393 accept_chi 1 ALIGNMENT 38 YS2-2a04.q1k vc_1 321 284 2472 2509 C 38 100.00 1393 reject_low 10 ALIGNMENT 124 YS2-2a04.q1k vc_4 322 483 126 287 F 162 93.21 1393 reject_low 9 ALIGNMENT 205 YS2-2a04.q1k vc_4 710 322 5429 5812 C 389 86.63 1393 reject_low 2 ALIGNMENT 35 YS2-2a04.q1k vc_5 318 284 1 35 C 35 100.00 1393 reject_low 16 ALIGNMENT 204 YS2-2a04.q1k vc_5 322 710 2398 2779 F 389 86.63 1393 reject_low 6 ALIGNMENT 38 YS2-2a04.q1k vc_2 321 284 2105 2142 C 38 100.00 1393 reject_low 11 ALIGNMENT 38 YS2-2a04.q1k vc_3 321 284 2472 2509 C 38 100.00 1393 reject_low 12 ALIGNMENT 76 YS2-2a04.q1k vc_4 408 322 1448 1534 C 87 96.55 1393 reject_low 15 ALIGNMENT 632 YS2-2a05.q1k chr14 26 824 409450 410244 F 799 94.24 1397 accept 0 ALIGNMENT 981 YS2-2a05.p1k chr14 1214 30 413269 414443 C 1185 95.61 1316 accept 0 ALIGNMENT 1046 YS2-2a06.p1k chr02 27 1303 376700 377975 F 1277 95.14 1329 accept 0 ALIGNMENT 1033 YS2-2a07.p1k chr02 30 1280 695574 696826 F 1251 95.44 1282 accept 0 ALIGNMENT 238 YS2-2a09.q1k chr16 10 254 168953 169198 F 245 99.59 1160 manual 1 ALIGNMENT 288 YS2-2a09.p1k chr16 491 199 168906 169198 C 293 100.00 509 accept_chi 0 ALIGNMENT 161 YS2-2a09.p1k chr05 29 202 312475 312650 F 174 98.85 509 reject_low 3 ALIGNMENT 0 YS2-2a09.q1k chr16 255 416 169198 169197 F 162 0.00 1160 manual 1 ALIGNMENT 0 YS2-2a09.p1k chr16 509 492 168907 168906 C 18 0.00 509 accept_chi 0 ALIGNMENT 0 YS2-2a09.p1k chr16 198 62 169199 169198 C 137 0.00 509 accept_chi 0 ALIGNMENT 0 YS2-2a09.p1k chr05 203 509 312650 312649 F 307 0.00 509 reject_low 3 ALIGNMENT 0 YS2-2a09.q1k chr05 250 62 312651 312650 C 189 0.00 1160 manual 2 ALIGNMENT 165 YS2-2a09.q1k chr05 426 251 312475 312650 C 176 98.86 1160 manual 2 ALIGNMENT 937 YS2-2a10.p1k chr09 1118 28 103858 104950 C 1091 96.33 1334 accept 0 ALIGNMENT 693 YS2-2a12.q1k chr08 863 3 420891 421761 C 861 94.19 1107 accept 0 ALIGNMENT 892 YS2-2a12.p1k chr08 30 1057 417764 418788 F 1028 96.30 1178 accept 0 ALIGNMENT 0 YS2-2a13.q1k vc_5 290 62 5064 5063 C 229 0.00 1300 reject_low 15 ALIGNMENT 323 YS2-2a13.p1k chr12 31 355 453676 454000 F 325 100.00 374 accept 0 ALIGNMENT 78 YS2-2a13.q1k vc_4 418 329 1446 1534 C 90 96.67 1300 reject_low 11 ALIGNMENT 276 YS2-2a13.q1k chr12 288 10 453676 453954 C 279 100.00 1300 reject_low 2 ALIGNMENT 127 YS2-2a13.q1k vc_2 329 516 2164 2347 F 188 90.96 1300 reject_low 4 ALIGNMENT 0 YS2-2a13.q1k vc_4 330 329 5872 6353 F 0 0.00 1300 reject_low 10 ALIGNMENT 32 YS2-2a13.q1k vc_7 292 329 13525 13562 F 38 94.74 1300 reject_low 16 ALIGNMENT 0 YS2-2a13.q1k vc_7 62 291 13525 13524 F 230 0.00 1300 reject_low 16 ALIGNMENT 127 YS2-2a13.q1k vc_1 329 516 2531 2714 F 188 90.96 1300 reject_low 3 ALIGNMENT 276 YS2-2a13.q1k chr12 288 10 462813 463091 C 279 100.00 1300 accept 0 ALIGNMENT 35 YS2-2a13.q1k vc_3 329 289 2472 2512 C 41 95.12 1300 reject_low 14 ALIGNMENT 0 YS2-2a13.q1k vc_4 328 62 1535 1534 C 267 0.00 1300 reject_low 11 ALIGNMENT 0 YS2-2a13.q1k vc_4 62 328 126 125 F 267 0.00 1300 reject_low 9 ALIGNMENT 127 YS2-2a13.q1k vc_4 516 329 5629 5812 C 188 90.96 1300 reject_low 6 ALIGNMENT 0 YS2-2a13.q1k vc_3 288 62 2513 2512 C 227 0.00 1300 reject_low 14 ALIGNMENT 0 YS2-2a13.q1k vc_1 288 62 2513 2512 C 227 0.00 1300 reject_low 12 ALIGNMENT 127 YS2-2a13.q1k vc_5 329 516 2398 2581 F 188 90.96 1300 reject_low 7 ALIGNMENT 0 YS2-2a13.p1k chr12 356 374 463137 463136 F 19 0.00 374 reject_low 1 ALIGNMENT 35 YS2-2a13.q1k vc_2 329 289 2105 2145 C 41 95.12 1300 reject_low 13 ALIGNMENT 0 YS2-2a13.q1k vc_7 328 62 2728 2727 C 267 0.00 1300 reject_low 8 ALIGNMENT 323 YS2-2a13.p1k chr12 31 355 462813 463137 F 325 100.00 374 reject_low 1 ALIGNMENT 0 YS2-2a13.p1k chr12 356 374 454000 453999 F 19 0.00 374 accept 0 ALIGNMENT 0 YS2-2a13.q1k vc_2 62 328 2164 2163 F 267 0.00 1300 reject_low 4 ALIGNMENT 35 YS2-2a13.q1k vc_4 289 329 5831 5871 F 41 95.12 1300 reject_low 10 ALIGNMENT 127 YS2-2a13.q1k vc_3 329 516 2531 2714 F 188 90.96 1300 reject_low 5 ALIGNMENT 127 YS2-2a13.q1k vc_7 516 329 2544 2727 C 188 90.96 1300 reject_low 8 ALIGNMENT 0 YS2-2a13.q1k vc_4 328 62 5813 5812 C 267 0.00 1300 reject_low 6 ALIGNMENT 33 YS2-2a13.q1k vc_5 329 291 5025 5063 C 39 94.87 1300 reject_low 15 ALIGNMENT 0 YS2-2a13.q1k vc_1 62 328 2531 2530 F 267 0.00 1300 reject_low 3 ALIGNMENT 0 YS2-2a13.q1k vc_2 288 62 2146 2145 C 227 0.00 1300 reject_low 13 ALIGNMENT 0 YS2-2a13.q1k vc_5 62 328 2398 2397 F 267 0.00 1300 reject_low 7 ALIGNMENT 0 YS2-2a13.q1k vc_5 290 62 37 36 C 229 0.00 1300 reject_low 17 ALIGNMENT 35 YS2-2a13.q1k vc_1 329 289 2472 2512 C 41 95.12 1300 reject_low 12 ALIGNMENT 0 YS2-2a13.q1k vc_4 62 288 5831 5830 F 227 0.00 1300 reject_low 10 ALIGNMENT 0 YS2-2a13.q1k vc_3 62 328 2531 2530 F 267 0.00 1300 reject_low 5 ALIGNMENT 112 YS2-2a13.q1k vc_4 329 484 126 278 F 156 92.31 1300 reject_low 9 ALIGNMENT 112 YS2-2a13.q1k vc_4 329 484 6353 6505 F 156 92.31 1300|1,0 reject_low 10 ALIGNMENT 31 YS2-2a13.q1k vc_5 321 291 6 36 C 31 100.00 1300 reject_low 17 ALIGNMENT 212 YS2-2a14.q1k vc_7 276 1 2298 2569 C 276 93.84 966 reject_low 4 ALIGNMENT 212 YS2-2a14.q1k vc_2 1 276 2322 2593 F 276 93.84 966 reject_low 2 ALIGNMENT 21 YS2-2a14.q1k vc_4 415 447 1971 2003 F 33 87.88 966 reject_low 7 ALIGNMENT 0 YS2-2a14.q1k vc_7 53 54 5172 6360 C 0 0.00 966 reject_low 6 ALIGNMENT 213 YS2-2a14.q1k vc_5 1 447 2556 2987 F 447 85.46 966 reject_vc 0 ALIGNMENT 212 YS2-2a14.q1k vc_3 1 276 2689 2960 F 276 93.84 966 reject_low 3 ALIGNMENT 205 YS2-2a14.q1k vc_4 276 1 5381 5654 C 276 93.12 966 reject_low 5 ALIGNMENT 158 YS2-2a14.q1k vc_7 276 53 4953 5172 C 224 91.96 966|0,1 reject_low 6 ALIGNMENT 212 YS2-2a14.q1k vc_1 1 276 2689 2960 F 276 93.84 966 reject_low 1 ALIGNMENT 51 YS2-2a14.q1k vc_7 54 3 6360 6411 C 52 100.00 966|1,0 reject_low 6 ALIGNMENT 684 YS2-2a15.q1k chr10 27 832 183848 184655 F 806 96.15 1232 accept 0 ALIGNMENT 937 YS2-2a15.p1k chr10 1156 29 187353 188493 C 1128 95.30 1169 accept 0 ALIGNMENT 1026 YS2-2a16.p1k chr07 28 1247 181878 183101 F 1220 95.33 1295 accept 0 ALIGNMENT 654 YS2-2a16.q1k chr07 832 42 183647 184429 C 791 96.33 1431 accept 0 ALIGNMENT 708 YS2-2a17.q1k chr09 29 910 215532 216407 F 882 94.90 1229 accept 0 ALIGNMENT 902 YS2-2a17.p1k chr09 1152 33 219523 220647 C 1120 93.75 1169 accept 0 ALIGNMENT 108 YS2-2a18.p1k chr13 775 913 504879 505016 F 139 93.53 1292 reject_low 5 ALIGNMENT 108 YS2-2a18.p1k chr07 775 913 423083 423220 F 139 93.53 1292 reject_low 4 ALIGNMENT 103 YS2-2a18.p1k chr03 777 913 90845 90980 F 137 92.70 1292 reject_low 9 ALIGNMENT 0 YS2-2a18.p1k chr14 62 775 442994 442993 F 714 0.00 1292 reject_low 3 ALIGNMENT 0 YS2-2a18.p1k chr03 62 776 90845 90844 F 715 0.00 1292 reject_low 9 ALIGNMENT 111 YS2-2a18.p1k chr07 913 775 857374 857511 C 139 94.24 1292 reject_low 2 ALIGNMENT 110 YS2-2a18.p1k chr14 776 913 442994 443130 F 138 94.20 1292 reject_low 3 ALIGNMENT 768 YS2-2a18.q1k chr04 32 921 1459653 1460537 F 890 96.18 1263 accept 0 ALIGNMENT 0 YS2-2a18.p1k chr12 62 777 628373 628372 F 716 0.00 1292 reject_low 7 ALIGNMENT 0 YS2-2a18.p1k chr01 62 779 181125 181124 F 718 0.00 1292 reject_low 6 ALIGNMENT 1042 YS2-2a18.p1k chr04 1260 35 1461348 1462575 C 1226 95.02 1292 accept 0 ALIGNMENT 0 YS2-2a18.p1k chr07 62 779 205517 205516 F 718 0.00 1292 reject_low 8 ALIGNMENT 0 YS2-2a18.p1k chr07 62 774 423083 423082 F 713 0.00 1292 reject_low 4 ALIGNMENT 0 YS2-2a18.p1k chr07 774 62 857512 857511 C 713 0.00 1292 reject_low 2 ALIGNMENT 0 YS2-2a18.p1k chr11 62 769 458180 458179 F 708 0.00 1292 reject_low 1 ALIGNMENT 109 YS2-2a18.p1k chr01 780 913 181125 181257 F 134 94.78 1292 reject_low 6 ALIGNMENT 0 YS2-2a18.p1k chr13 62 774 504879 504878 F 713 0.00 1292 reject_low 5 ALIGNMENT 104 YS2-2a18.p1k chr07 780 914 205517 205650 F 135 93.33 1292 reject_low 8 ALIGNMENT 106 YS2-2a18.p1k chr12 778 912 628373 628507 F 135 93.33 1292 reject_low 7 ALIGNMENT 112 YS2-2a18.p1k chr11 770 918 458180 458326 F 149 92.62 1292 reject_low 1 ALIGNMENT 557 YS2-2a19.q1k chr15 46 712 950456 951121 F 667 95.80 1406 accept 0 ALIGNMENT 1069 YS2-2a19.p1k chr15 1264 29 953489 954729 C 1236 95.87 1272 accept 0 ALIGNMENT 666 YS2-2a20.q1k chr04 853 37 1227995 1228803 C 817 95.10 1298 accept 0 ALIGNMENT 1104 YS2-2a20.p1k chr04 29 1215 1224962 1226151 F 1187 98.06 1271 accept 0 ALIGNMENT 866 YS2-2a21.p1k chr14 30 1056 654654 655695 F 1027 95.23 1099 accept 0 ALIGNMENT 736 YS2-2a21.q1k chr14 930 32 658632 659522 C 899 95.11 1161 accept 0 ALIGNMENT 1013 YS2-2a24.p1k scplasm1 1187 29 4458 5623 C 1159 96.64 1204 accept 0 ALIGNMENT 50 YS2-2a24.p1k vc_6 82 29 5263 5316 C 54 98.15 1204 reject_low 1 ALIGNMENT 384 YS2-2a24.q1k scplasm1 64 719 885 1540 F 656 87.80 1262 accept 0 ALIGNMENT 0 YS2-2a24.p1k vc_6 863 83 5264 5263 C 781 0.00 1204 reject_low 1 ALIGNMENT 27 YS2-2a24.q1k scplasm1 118 64 3714 3768 C 55 85.45 1262 reject_low 2 ALIGNMENT 0 YS2-2a24.q1k scplasm1 494 119 3715 3714 C 376 0.00 1262 reject_low 2 ALIGNMENT 1025 YS2-2b02.p1k chr15 1249 31 46022 47253 C 1219 95.41 1278 accept 0 ALIGNMENT 450 YS2-2b02.q1k chr15 56 916 43056 43900 F 861 86.53 1304 accept 0 ALIGNMENT 1078 YS2-2b03.p1k chr12 31 1297 456774 458049 F 1267 95.58 1308 manual 0 ALIGNMENT 1072 YS2-2b03.p1k chr12 31 1288 465911 467177 F 1258 95.63 1308 manual 1 ALIGNMENT 0 YS2-2b04.q1k chr07 244 640 931884 931883 F 397 0.00 1372 reject_low 17 ALIGNMENT 0 YS2-2b04.q1k chr08 640 244 116555 116554 C 397 0.00 1372 reject_low 18 ALIGNMENT 0 YS2-2b04.q1k chr13 640 205 481393 481392 C 436 0.00 1372 reject_low 2 ALIGNMENT 44 YS2-2b04.q1k chr08 243 106 116554 116693 C 138 81.16 1372 reject_low 18 ALIGNMENT 50 YS2-2b04.q1k chr07 243 106 823118 823257 C 138 82.61 1372 reject_low 9 ALIGNMENT 47 YS2-2b04.q1k chr02 106 243 259630 259769 F 138 81.88 1372 reject_low 13 ALIGNMENT 50 YS2-2b04.q1k chr02 106 243 221094 221233 F 138 82.61 1372 reject_low 5 ALIGNMENT 0 YS2-2b04.q1k chr07 244 640 535408 535407 F 397 0.00 1372 reject_low 7 ALIGNMENT 0 YS2-2b04.q1k chr02 244 640 221233 221232 F 397 0.00 1372 reject_low 5 ALIGNMENT 0 YS2-2b04.q1k chr14 640 244 96749 96748 C 397 0.00 1372 reject_low 15 ALIGNMENT 44 YS2-2b04.q1k chr07 106 243 931745 931884 F 138 81.16 1372 reject_low 17 ALIGNMENT 0 YS2-2b04.q1k chr15 640 244 664134 664133 C 397 0.00 1372 reject_low 4 ALIGNMENT 58 YS2-2b04.q1k chr15 243 96 3032 3180 C 148 83.11 1372 reject_low 3 ALIGNMENT 26 YS2-2b04.q1k chr16 243 197 436384 436430 C 47 91.49 1372 reject_low 20 ALIGNMENT 50 YS2-2b04.q1k chr11 243 106 457921 458060 C 138 82.61 1372 reject_low 10 ALIGNMENT 0 YS2-2b04.q1k chr16 640 244 436385 436384 C 397 0.00 1372 reject_low 20 ALIGNMENT 0 YS2-2b04.q1k chr07 640 244 817537 817536 C 397 0.00 1372 reject_low 8 ALIGNMENT 0 YS2-2b04.q1k chr07 640 244 823119 823118 C 397 0.00 1372 reject_low 9 ALIGNMENT 699 YS2-2b04.q1k chr06 54 950 261288 262172 F 897 95.09 1372 accept 0 ALIGNMENT 47 YS2-2b04.q1k chr03 242 106 124270 124408 C 137 81.75 1372 reject_low 16 ALIGNMENT 47 YS2-2b04.q1k chr08 243 106 549444 549583 C 138 81.88 1372 reject_low 14 ALIGNMENT 50 YS2-2b04.q1k chr02 106 243 226678 226817 F 138 82.61 1372 reject_low 6 ALIGNMENT 50 YS2-2b04.q1k chr07 106 243 535269 535408 F 138 82.61 1372 reject_low 7 ALIGNMENT 0 YS2-2b04.q1k chr08 640 244 549445 549444 C 397 0.00 1372 reject_low 14 ALIGNMENT 0 YS2-2b04.q1k chr03 640 243 124271 124270 C 398 0.00 1372 reject_low 16 ALIGNMENT 50 YS2-2b04.q1k chr13 243 106 357142 357281 C 138 82.61 1372 reject_low 11 ALIGNMENT 0 YS2-2b04.q1k chr02 244 640 259769 259768 F 397 0.00 1372 reject_low 13 ALIGNMENT 0 YS2-2b04.q1k chr13 640 240 378871 378870 C 401 0.00 1372 reject_low 1 ALIGNMENT 0 YS2-2b04.q1k chr16 196 157 436431 436483 C 40 0.00 1372 reject_low 20 ALIGNMENT 56 YS2-2b04.q1k chr15 243 101 664133 664276 C 143 83.22 1372 reject_low 4 ALIGNMENT 0 YS2-2b04.q1k chr15 640 244 3033 3032 C 397 0.00 1372 reject_low 3 ALIGNMENT 0 YS2-2b04.q1k chr11 640 244 457922 457921 C 397 0.00 1372 reject_low 10 ALIGNMENT 50 YS2-2b04.q1k chr04 108 243 1151087 1151223 F 136 82.35 1372 reject_low 12 ALIGNMENT 36 YS2-2b04.q1k chr16 156 97 436484 436543 C 60 88.33 1372 reject_low 20 ALIGNMENT 0 YS2-2b04.q1k chr02 640 170 258861 258860 C 471 0.00 1372 reject_low 19 ALIGNMENT 0 YS2-2b04.q1k chr13 640 244 357143 357142 C 397 0.00 1372 reject_low 11 ALIGNMENT 991 YS2-2b04.p1k chr06 1211 28 262134 263336 C 1184 96.20 1285 accept 0 ALIGNMENT 0 YS2-2b04.q1k chr02 244 640 226817 226816 F 397 0.00 1372 reject_low 6 ALIGNMENT 50 YS2-2b04.q1k chr07 243 106 817536 817675 C 138 82.61 1372 reject_low 8 ALIGNMENT 0 YS2-2b04.q1k chr04 244 640 1151223 1151222 F 397 0.00 1372 reject_low 12 ALIGNMENT 27 YS2-2b04.q1k chr02 169 108 258860 258921 C 62 83.87 1372 reject_low 19 ALIGNMENT 57 YS2-2b04.q1k chr13 204 55 481392 481540 C 150 82.67 1372 reject_low 2 ALIGNMENT 47 YS2-2b04.q1k chr14 243 106 96748 96887 C 138 81.88 1372 reject_low 15 ALIGNMENT 63 YS2-2b04.q1k chr13 239 54 378870 379055 C 186 81.18 1372 reject_low 1 ALIGNMENT 0 YS2-2b06.q1k chr07 317 173 530034 530033 C 145 0.00 1379 reject_low 7 ALIGNMENT 22 YS2-2b06.q1k chr04 142 172 604239 604269 F 31 96.77 1379 reject_low 6 ALIGNMENT 0 YS2-2b06.q1k chr08 149 122 365406 365405 C 28 0.00 1379 reject_low 8 ALIGNMENT 413 YS2-2b06.q1k chr03 650 52 270995 271584 C 599 91.82 1379 accept 0 ALIGNMENT 0 YS2-2b06.q1k chr15 317 176 63054 63053 C 142 0.00 1379 reject_low 3 ALIGNMENT 0 YS2-2b06.q1k chr07 177 317 378064 378063 F 141 0.00 1379 reject_low 4 ALIGNMENT 29 YS2-2b06.q1k chr15 175 143 63053 63085 C 33 100.00 1379 reject_low 3 ALIGNMENT 0 YS2-2b06.q1k chr13 122 141 209874 209873 F 20 0.00 1379 reject_low 2 ALIGNMENT 0 YS2-2b06.q1k chr05 317 174 309001 309000 C 144 0.00 1379 reject_low 5 ALIGNMENT 0 YS2-2b06.q1k chr04 122 141 604239 604238 F 20 0.00 1379 reject_low 6 ALIGNMENT 0 YS2-2b06.q1k chr05 145 122 309028 309027 C 24 0.00 1379 reject_low 5 ALIGNMENT 0 YS2-2b06.q1k chr07 144 122 530061 530060 C 23 0.00 1379 reject_low 7 ALIGNMENT 0 YS2-2b06.q1k chr04 173 317 604269 604268 F 145 0.00 1379 reject_low 6 ALIGNMENT 30 YS2-2b06.q1k chr13 142 175 209874 209907 F 34 100.00 1379 reject_low 2 ALIGNMENT 0 YS2-2b06.q1k chr07 122 139 378028 378027 F 18 0.00 1379 reject_low 4 ALIGNMENT 30 YS2-2b06.q1k chr04 175 141 1038641 1038675 C 35 100.00 1379 reject_low 1 ALIGNMENT 22 YS2-2b06.q1k chr08 173 150 365382 365405 C 24 100.00 1379 reject_low 8 ALIGNMENT 23 YS2-2b06.q1k chr07 140 176 378028 378064 F 37 89.19 1379 reject_low 4 ALIGNMENT 0 YS2-2b06.q1k chr04 317 176 1038642 1038641 C 142 0.00 1379 reject_low 1 ALIGNMENT 0 YS2-2b06.q1k chr04 140 122 1038676 1038675 C 19 0.00 1379 reject_low 1 ALIGNMENT 0 YS2-2b06.q1k chr15 142 122 63086 63085 C 21 0.00 1379 reject_low 3 ALIGNMENT 25 YS2-2b06.q1k chr05 173 146 309000 309027 C 28 100.00 1379 reject_low 5 ALIGNMENT 0 YS2-2b06.q1k chr08 317 174 365383 365382 C 144 0.00 1379 reject_low 8 ALIGNMENT 22 YS2-2b06.q1k chr07 172 145 530033 530060 C 28 100.00 1379 reject_low 7 ALIGNMENT 1053 YS2-2b06.p1k chr03 29 1254 266633 267872 F 1226 96.08 1301 accept 0 ALIGNMENT 0 YS2-2b06.q1k chr13 176 317 209907 209906 F 142 0.00 1379 reject_low 2 ALIGNMENT 528 YS2-2b07.q1k chr13 1 719 679304 680016 F 719 92.49 1107 accept 0 ALIGNMENT 1010 YS2-2b07.p1k chr13 1269 34 679841 681084 C 1236 94.82 1293 accept 0 ALIGNMENT 330 YS2-2b08.p1k vc_7 807 1289 100 582 F 483 90.48 1293 reject_low 6 ALIGNMENT 0 YS2-2b08.p1k vc_1 880 838 2442 2441 C 43 0.00 1293 reject_low 9 ALIGNMENT 0 YS2-2b08.p1k vc_2 806 62 2106 2105 C 745 0.00 1293 reject_low 3 ALIGNMENT 0 YS2-2b08.p1k vc_1 806 62 2106 2105 C 745 0.00 1293 reject_low 2 ALIGNMENT 330 YS2-2b08.p1k vc_7 807 1289 13562 14044 F 483 90.48 1293 reject_low 7 ALIGNMENT 0 YS2-2b08.p1k vc_5 806 62 5026 5025 C 745 0.00 1293 reject_low 5 ALIGNMENT 414 YS2-2b08.q1k chr12 59 722 927993 928648 F 664 91.11 1396 accept_chi 1 ALIGNMENT 0 YS2-2b08.p1k vc_1 806 62 2473 2472 C 745 0.00 1293 reject_low 9 ALIGNMENT 288 YS2-2b08.p1k vc_4 807 1163 5871 6226 F 357 93.84 1293 reject_low 8 ALIGNMENT 0 YS2-2b08.p1k vc_7 62 806 13562 13561 F 745 0.00 1293 reject_low 7 ALIGNMENT 330 YS2-2b08.p1k vc_5 1289 807 4543 5025 C 483 90.48 1293 reject_low 5 ALIGNMENT 0 YS2-2b08.p1k vc_3 806 62 2106 2105 C 745 0.00 1293 reject_low 4 ALIGNMENT 0 YS2-2b08.p1k chr12 880 789 927993 927992 C 92 0.00 1293 accept_chi 0 ALIGNMENT 330 YS2-2b08.p1k vc_1 1289 807 1623 2105 C 483 90.48 1293 reject_low 2 ALIGNMENT 26 YS2-2b08.p1k vc_1 837 807 2441 2472 C 31 96.77 1293 reject_low 9 ALIGNMENT 0 YS2-2b08.p1k vc_4 62 806 5871 5870 F 745 0.00 1293 reject_low 8 ALIGNMENT 330 YS2-2b08.p1k vc_2 1289 807 1623 2105 C 483 90.48 1293 reject_low 3 ALIGNMENT 684 YS2-2b08.p1k chr12 788 30 927992 928749 C 759 99.08 1293 accept_chi 0 ALIGNMENT 0 YS2-2b08.p1k vc_7 62 806 100 99 F 745 0.00 1293 reject_low 6 ALIGNMENT 0 YS2-2b08.p1k vc_3 806 62 2473 2472 C 745 0.00 1293 reject_low 10 ALIGNMENT 0 YS2-2b08.p1k vc_3 880 838 2442 2441 C 43 0.00 1293 reject_low 10 ALIGNMENT 26 YS2-2b08.p1k vc_3 837 807 2441 2472 C 31 96.77 1293 reject_low 10 ALIGNMENT 330 YS2-2b08.p1k vc_3 1289 807 1623 2105 C 483 90.48 1293 reject_low 4 ALIGNMENT 600 YS2-2b09.q1k chr14 818 1 537320 538136 C 818 92.30 1115 accept 0 ALIGNMENT 1009 YS2-2b09.p1k chr14 30 1239 532379 533599 F 1210 95.62 1356 accept 0 ALIGNMENT 1040 YS2-2b10.p1k chr02 32 1263 77683 78927 F 1232 96.59 1347 accept 0 ALIGNMENT 596 YS2-2b10.q1k chr02 812 48 83673 84430 C 765 94.12 1393 accept 0 ALIGNMENT 0 YS2-2b12.q1k chr02 144 62 7970 7969 C 83 0.00 1182 reject_low 11 ALIGNMENT 249 YS2-2b12.q1k chr09 145 516 433924 434295 F 372 89.25 1182 reject_low 2 ALIGNMENT 175 YS2-2b12.q1k chr08 505 145 11933 12284 C 361 84.21 1182 reject_low 13 ALIGNMENT 166 YS2-2b12.q1k chr02 145 505 809050 809401 F 361 83.66 1182 reject_low 20 ALIGNMENT 715 YS2-2b12.q1k chr12 959 1 222252 223205 C 959 93.33 1182 accept 0 ALIGNMENT 0 YS2-2b12.q1k chr06 557 506 99238 99237 C 52 0.00 1182 reject_low 9 ALIGNMENT 0 YS2-2b12.q1k chr15 557 506 11561 11560 C 52 0.00 1182 reject_low 10 ALIGNMENT 0 YS2-2b12.q1k chr07 506 557 1080662 1080661 F 52 0.00 1182 reject_low 16 ALIGNMENT 0 YS2-2b12.q1k chr02 557 506 7618 7617 C 52 0.00 1182 reject_low 11 ALIGNMENT 0 YS2-2b12.q1k chr10 144 62 9140 9139 C 83 0.00 1182 reject_low 15 ALIGNMENT 243 YS2-2b12.q1k chr13 145 516 922638 923009 F 372 88.71 1182 reject_low 5 ALIGNMENT 232 YS2-2b12.q1k chr15 162 516 1082850 1083204 F 355 88.73 1182 reject_low 7 ALIGNMENT 0 YS2-2b12.q1k chr10 557 506 8789 8788 C 52 0.00 1182 reject_low 15 ALIGNMENT 0 YS2-2b12.q1k chr04 62 144 1523231 1523230 F 83 0.00 1182 reject_low 19 ALIGNMENT 204 YS2-2b12.q1k chr06 505 145 99237 99594 C 361 86.15 1182 reject_low 9 ALIGNMENT 0 YS2-2b12.q1k chr09 517 557 434295 434294 F 41 0.00 1182 reject_low 2 ALIGNMENT 0 YS2-2b12.q1k chr09 557 506 8806 8805 C 52 0.00 1182 reject_low 14 ALIGNMENT 0 YS2-2b12.q1k chr11 557 506 1824 1823 C 52 0.00 1182 reject_low 6 ALIGNMENT 0 YS2-2b12.q1k chr13 62 144 922638 922637 F 83 0.00 1182 reject_low 5 ALIGNMENT 0 YS2-2b12.q1k chr04 506 557 1523582 1523581 F 52 0.00 1182 reject_low 19 ALIGNMENT 0 YS2-2b12.q1k chr06 144 62 99595 99594 C 83 0.00 1182 reject_low 9 ALIGNMENT 250 YS2-2b12.q1k chr11 505 145 1823 2183 C 361 90.03 1182 reject_low 6 ALIGNMENT 0 YS2-2b12.q1k chr01 557 506 176666 176665 C 52 0.00 1182 reject_low 8 ALIGNMENT 0 YS2-2b12.q1k chr02 62 144 809050 809049 F 83 0.00 1182 reject_low 20 ALIGNMENT 0 YS2-2b12.q1k chr02 506 557 809401 809400 F 52 0.00 1182 reject_low 20 ALIGNMENT 0 YS2-2b12.q1k chr07 144 62 6654 6653 C 83 0.00 1182 reject_low 12 ALIGNMENT 0 YS2-2b12.q1k chr15 144 62 11912 11911 C 83 0.00 1182 reject_low 10 ALIGNMENT 246 YS2-2b12.q1k chr03 145 516 307796 308167 F 372 88.98 1182 reject_low 3 ALIGNMENT 175 YS2-2b12.q1k chr02 505 145 7617 7969 C 361 84.21 1182 reject_low 11 ALIGNMENT 172 YS2-2b12.q1k chr14 145 505 781917 782268 F 361 83.93 1182 reject_low 18 ALIGNMENT 0 YS2-2b12.q1k chr12 144 62 13447 13446 C 83 0.00 1182 reject_low 17 ALIGNMENT 0 YS2-2b12.q1k chr11 144 62 2184 2183 C 83 0.00 1182 reject_low 6 ALIGNMENT 0 YS2-2b12.q1k chr15 62 161 1082850 1082849 F 100 0.00 1182 reject_low 7 ALIGNMENT 175 YS2-2b12.q1k chr09 505 145 8805 9156 C 361 84.21 1182 reject_low 14 ALIGNMENT 0 YS2-2b12.q1k chr12 520 557 95119 95118 F 38 0.00 1182 reject_low 1 ALIGNMENT 172 YS2-2b12.q1k chr12 505 145 13095 13446 C 361 83.93 1182 reject_low 17 ALIGNMENT 0 YS2-2b12.q1k chr07 62 144 1080311 1080310 F 83 0.00 1182 reject_low 16 ALIGNMENT 981 YS2-2b12.p1k chr12 35 1158 211764 212901 F 1124 96.62 1290 accept 0 ALIGNMENT 208 YS2-2b12.q1k chr01 505 145 176665 177022 C 361 86.98 1182 reject_low 8 ALIGNMENT 0 YS2-2b12.q1k chr14 62 144 781917 781916 F 83 0.00 1182 reject_low 18 ALIGNMENT 172 YS2-2b12.q1k chr07 145 505 1080311 1080662 F 361 84.21 1182 reject_low 16 ALIGNMENT 0 YS2-2b12.q1k chr03 517 557 308167 308166 F 41 0.00 1182 reject_low 3 ALIGNMENT 0 YS2-2b12.q1k chr03 62 144 307796 307795 F 83 0.00 1182 reject_low 3 ALIGNMENT 169 YS2-2b12.q1k chr04 145 505 1523231 1523582 F 361 83.66 1182 reject_low 19 ALIGNMENT 0 YS2-2b12.q1k chr08 557 506 11934 11933 C 52 0.00 1182 reject_low 13 ALIGNMENT 0 YS2-2b12.q1k chr16 144 62 8309 8308 C 83 0.00 1182 reject_low 4 ALIGNMENT 0 YS2-2b12.q1k chr09 144 62 9157 9156 C 83 0.00 1182 reject_low 14 ALIGNMENT 0 YS2-2b12.q1k chr16 557 517 7938 7937 C 41 0.00 1182 reject_low 4 ALIGNMENT 0 YS2-2b12.q1k chr09 62 144 433924 433923 F 83 0.00 1182 reject_low 2 ALIGNMENT 0 YS2-2b12.q1k chr12 62 144 94745 94744 F 83 0.00 1182 reject_low 1 ALIGNMENT 0 YS2-2b12.q1k chr12 557 506 13096 13095 C 52 0.00 1182 reject_low 17 ALIGNMENT 300 YS2-2b12.q1k chr12 145 519 94745 95119 F 375 93.60 1182 reject_low 1 ALIGNMENT 0 YS2-2b12.q1k chr15 517 557 1083204 1083203 F 41 0.00 1182 reject_low 7 ALIGNMENT 179 YS2-2b12.q1k chr15 505 145 11560 11911 C 361 84.76 1182 reject_low 10 ALIGNMENT 175 YS2-2b12.q1k chr10 505 145 8788 9139 C 361 84.21 1182 reject_low 15 ALIGNMENT 0 YS2-2b12.q1k chr13 517 557 923009 923008 F 41 0.00 1182 reject_low 5 ALIGNMENT 246 YS2-2b12.q1k chr16 516 145 7937 8308 C 372 88.98 1182 reject_low 4 ALIGNMENT 0 YS2-2b12.q1k chr01 144 62 177023 177022 C 83 0.00 1182 reject_low 8 ALIGNMENT 0 YS2-2b12.q1k chr08 144 62 12285 12284 C 83 0.00 1182 reject_low 13 ALIGNMENT 0 YS2-2b12.q1k chr07 557 506 6303 6302 C 52 0.00 1182 reject_low 12 ALIGNMENT 175 YS2-2b12.q1k chr07 505 145 6302 6653 C 361 84.21 1182 reject_low 12 ALIGNMENT 0 YS2-2b12.q1k chr14 506 557 782268 782267 F 52 0.00 1182 reject_low 18 ALIGNMENT 393 YS2-2b13.q1k chr01 609 44 97116 97670 C 566 92.05 1443 accept 0 ALIGNMENT 611 YS2-2b13.p1k chr01 32 668 97037 97674 F 637 99.84 685 accept 0 ALIGNMENT 0 YS2-2b13.p1k chr01 669 685 97674 97673 F 17 0.00 685 accept 0 ALIGNMENT 335 YS2-2b15.q1k chr04 556 68 338756 339234 C 489 91.41 1533 accept 0 ALIGNMENT 0 YS2-2b15.p1k chr12 62 119 504788 504787 F 58 0.00 1271 reject_low 1 ALIGNMENT 110 YS2-2b15.p1k chr12 120 976 504788 505641 F 857 72.35 1271 reject_low 1 ALIGNMENT 1037 YS2-2b15.p1k chr04 30 1253 334987 336221 F 1224 95.92 1271 accept 0 ALIGNMENT 572 YS2-2b16.q1k chr05 52 794 195279 196015 F 743 93.14 1418 accept 0 ALIGNMENT 1030 YS2-2b16.p1k chr05 1254 29 199260 200489 C 1226 96.25 1275 accept 0 ALIGNMENT 0 YS2-2b18.q1k chr15 188 163 620804 620829 C 26 0.00 1441 reject_low 1 ALIGNMENT 0 YS2-2b18.q1k chr15 571 261 620733 620732 C 311 0.00 1441 reject_low 1 ALIGNMENT 21 YS2-2b18.q1k chr15 162 139 620830 620853 C 24 95.83 1441 reject_low 1 ALIGNMENT 30 YS2-2b18.q1k chr15 260 189 620732 620803 C 72 80.56 1441 reject_low 1 ALIGNMENT 0 YS2-2b18.q1k chr15 138 77 620854 620853 C 62 0.00 1441 reject_low 1 ALIGNMENT 1028 YS2-2b18.p1k chr14 29 1247 761973 763177 F 1219 95.98 1305 accept 0 ALIGNMENT 650 YS2-2b18.q1k chr14 832 53 765320 766087 C 780 95.90 1441 accept 0 ALIGNMENT 589 YS2-2b19.q1k chr02 45 734 335522 336208 F 690 96.38 1344 accept 0 ALIGNMENT 962 YS2-2b19.p1k chr02 1236 32 336690 337894 C 1205 94.19 1273 accept 0 ALIGNMENT 0 YS2-2b19.p1k chrm 664 62 55297 55296 C 603 0.00 1273 reject_low 1 ALIGNMENT 0 YS2-2b19.p1k chrm 858 686 55277 55276 C 173 0.00 1273 reject_low 1 ALIGNMENT 21 YS2-2b19.p1k chrm 685 665 55276 55296 C 21 100.00 1273 reject_low 1 ALIGNMENT 0 YS2-2b20.q1k vc_3 495 208 2473 2472 C 288 0.00 1415 reject_low 13 ALIGNMENT 36 YS2-2b20.q1k vc_5 204 169 1 36 C 36 100.00 1415 reject_low 18 ALIGNMENT 196 YS2-2b20.q1k vc_7 670 417 4922 5172 C 254 93.31 1415|0,1 reject_low 8 ALIGNMENT 103 YS2-2b20.q1k chr12 53 167 466163 466275 F 115 98.26 1415 accept 1 ALIGNMENT 0 YS2-2b20.q1k chr12 168 495 466275 466274 F 328 0.00 1415 accept 1 ALIGNMENT 0 YS2-2b20.q1k chr12 168 495 457138 457137 F 328 0.00 1415 accept 0 ALIGNMENT 0 YS2-2b20.q1k vc_1 495 208 2473 2472 C 288 0.00 1415 reject_low 11 ALIGNMENT 0 YS2-2b20.q1k vc_4 107 206 126 125 F 100 0.00 1415 reject_low 10 ALIGNMENT 403 YS2-2b20.q1k vc_3 207 670 2531 2991 F 464 96.34 1415 reject_low 7 ALIGNMENT 159 YS2-2b20.q1k vc_4 207 368 6353 6514 F 162 100.00 1415|1,0 reject_low 9 ALIGNMENT 0 YS2-2b20.q1k vc_7 206 107 2728 2727 C 100 0.00 1415 reject_vc 2 ALIGNMENT 56 YS2-2b20.q1k vc_4 671 604 6273 6339 C 68 95.59 1415 reject_low 17 ALIGNMENT 103 YS2-2b20.q1k chr12 53 167 457026 457138 F 115 98.26 1415 accept 0 ALIGNMENT 403 YS2-2b20.q1k vc_2 207 670 2164 2624 F 464 96.34 1415 reject_low 6 ALIGNMENT 0 YS2-2b20.q1k vc_5 495 205 2 1 C 291 0.00 1415 reject_low 18 ALIGNMENT 87 YS2-2b20.q1k vc_4 295 207 1446 1534 C 89 100.00 1415 reject_low 19 ALIGNMENT 0 YS2-2b20.q1k vc_5 107 206 2398 2397 F 100 0.00 1415 reject_vc 3 ALIGNMENT 42 YS2-2b20.q1k vc_3 207 166 2472 2513 C 42 100.00 1415 reject_low 13 ALIGNMENT 0 YS2-2b20.q1k vc_3 107 206 2531 2530 F 100 0.00 1415 reject_low 7 ALIGNMENT 0 YS2-2b20.q1k vc_1 165 107 2514 2513 C 59 0.00 1415 reject_low 11 ALIGNMENT 0 YS2-2b20.q1k vc_4 208 207 5872 6353 F 0 0.00 1415 reject_low 9 ALIGNMENT 0 YS2-2b20.q1k vc_4 369 495 6514 6513 F 127 0.00 1415 reject_low 9 ALIGNMENT 42 YS2-2b20.q1k vc_2 207 166 2105 2146 C 42 100.00 1415 reject_low 12 ALIGNMENT 0 YS2-2b20.q1k vc_2 165 107 2147 2146 C 59 0.00 1415 reject_low 12 ALIGNMENT 0 YS2-2b20.q1k vc_2 495 208 2106 2105 C 288 0.00 1415 reject_low 12 ALIGNMENT 0 YS2-2b20.q1k vc_7 208 495 100 99 F 288 0.00 1415 reject_low 15 ALIGNMENT 0 YS2-2b20.q1k vc_4 206 107 1535 1534 C 100 0.00 1415 reject_low 19 ALIGNMENT 56 YS2-2b20.q1k vc_4 671 604 46 112 C 68 95.59 1415 reject_low 19 ALIGNMENT 42 YS2-2b20.q1k vc_4 166 207 5830 5871 F 42 100.00 1415 reject_low 9 ALIGNMENT 0 YS2-2b20.q1k vc_1 107 206 2531 2530 F 100 0.00 1415 reject_low 5 ALIGNMENT 0 YS2-2b20.q1k vc_7 208 495 13562 13561 F 288 0.00 1415 reject_low 16 ALIGNMENT 38 YS2-2b20.q1k vc_7 170 207 63 100 F 38 100.00 1415 reject_low 15 ALIGNMENT 56 YS2-2b20.q1k vc_4 604 671 1548 1614 F 68 95.59 1415 reject_low 10 ALIGNMENT 0 YS2-2b20.q1k vc_4 603 107 6340 6339 C 497 0.00 1415 reject_low 17 ALIGNMENT 0 YS2-2b20.q1k vc_4 107 165 5830 5829 F 59 0.00 1415 reject_low 9 ALIGNMENT 0 YS2-2b20.q1k vc_5 168 107 37 36 C 62 0.00 1415 reject_low 18 ALIGNMENT 38 YS2-2b20.q1k vc_7 170 207 13525 13562 F 38 100.00 1415 reject_low 16 ALIGNMENT 0 YS2-2b20.q1k vc_7 107 169 13525 13524 F 63 0.00 1415 reject_low 16 ALIGNMENT 0 YS2-2b20.q1k vc_7 366 107 6412 6411 C 260 0.00 1415 reject_low 8 ALIGNMENT 0 YS2-2b20.q1k vc_7 107 169 63 62 F 63 0.00 1415 reject_low 15 ALIGNMENT 0 YS2-2b20.q1k vc_5 168 107 5064 5063 C 62 0.00 1415 reject_low 14 ALIGNMENT 424 YS2-2b20.q1k vc_4 785 207 5244 5812 C 579 92.57 1415 reject_low 4 ALIGNMENT 0 YS2-2b20.q1k vc_3 165 107 2514 2513 C 59 0.00 1415 reject_low 13 ALIGNMENT 42 YS2-2b20.q1k vc_1 207 166 2472 2513 C 42 100.00 1415 reject_low 11 ALIGNMENT 0 YS2-2b20.q1k vc_4 603 296 113 1445 C 308 0.00 1415 reject_low 19 ALIGNMENT 0 YS2-2b20.q1k vc_4 206 107 5813 5812 C 100 0.00 1415 reject_low 4 ALIGNMENT 48 YS2-2b20.q1k vc_7 418 367 6360 6411 C 52 98.08 1415|1,0 reject_low 8 ALIGNMENT 159 YS2-2b20.q1k vc_4 207 368 126 287 F 162 100.00 1415 reject_low 10 ALIGNMENT 0 YS2-2b20.q1k vc_4 369 603 288 1547 F 235 0.00 1415 reject_low 10 ALIGNMENT 431 YS2-2b20.q1k vc_7 785 207 2161 2727 C 579 92.92 1415 reject_vc 2 ALIGNMENT 0 YS2-2b20.q1k vc_7 417 418 5172 6360 C 0 0.00 1415 reject_low 8 ALIGNMENT 0 YS2-2b20.q1k vc_5 495 208 5026 5025 C 288 0.00 1415 reject_low 14 ALIGNMENT 0 YS2-2b20.q1k vc_2 107 206 2164 2163 F 100 0.00 1415 reject_low 6 ALIGNMENT 430 YS2-2b20.q1k vc_5 207 785 2398 2964 F 579 92.92 1415 reject_vc 3 ALIGNMENT 39 YS2-2b20.q1k vc_5 207 169 5025 5063 C 39 100.00 1415 reject_low 14 ALIGNMENT 403 YS2-2b20.q1k vc_1 207 670 2531 2991 F 464 96.34 1415 reject_low 5 ALIGNMENT 679 YS2-2b21.q1k chr04 6 814 820747 821547 F 809 96.04 1176 accept 0 ALIGNMENT 1026 YS2-2b21.p1k chr04 1182 32 824979 826129 C 1151 98.00 1192 accept 0 ALIGNMENT 691 YS2-2b22.q1k chr16 2 910 403037 403935 F 909 93.62 1102 accept 0 ALIGNMENT 991 YS2-2b22.p1k chr16 1190 30 407007 408176 C 1161 95.95 1191 accept 0 ALIGNMENT 305 YS2-2b22.p1k chr02 1126 662 606673 607141 C 465 88.60 1191 reject_low 1 ALIGNMENT 0 YS2-2b22.p1k chr02 661 62 607142 607141 C 600 0.00 1191 reject_low 1 ALIGNMENT 886 YS2-2b23.p1k chr05 1049 35 528459 529487 C 1015 96.65 1136 accept 0 ALIGNMENT 675 YS2-2b23.q1k chr05 50 839 524030 524809 F 790 96.58 1261 accept 0 ALIGNMENT 224 YS2-2b24.p1k vc_3 364 3 1514 1876 C 362 87.57 810 reject_vc 2 ALIGNMENT 224 YS2-2b24.p1k vc_7 3 364 13791 14153 F 362 87.57 810 reject_vc 6 ALIGNMENT 224 YS2-2b24.p1k vc_2 364 3 1514 1876 C 362 87.57 810 reject_vc 1 ALIGNMENT 224 YS2-2b24.p1k vc_7 3 364 329 691 F 362 87.57 810 reject_vc 5 ALIGNMENT 224 YS2-2b24.p1k vc_6 3 364 3585 3947 F 362 87.57 810 reject_vc 4 ALIGNMENT 224 YS2-2b24.p1k vc_5 364 3 4434 4796 C 362 87.57 810 reject_vc 3 ALIGNMENT 91 YS2-2b24.p1k vc_4 3 129 6100 6226 F 127 90.55 810 reject_low 7 ALIGNMENT 224 YS2-2b24.p1k vc_1 364 3 1514 1876 C 362 87.57 810 reject_vc 0 ALIGNMENT 716 YS2-2c01.p1k chr11 35 787 241340 242092 F 753 99.34 788 accept 0 ALIGNMENT 565 YS2-2c01.q1k chr11 773 51 241369 242092 C 723 93.78 1351 accept 0 ALIGNMENT 592 YS2-2c03.q1k chr15 862 60 383490 384280 C 803 92.90 1438 accept 0 ALIGNMENT 1093 YS2-2c03.p1k chr15 29 1269 380107 381348 F 1241 97.18 1294 accept 0 ALIGNMENT 1037 YS2-2c04.p1k chr14 34 1247 392701 393923 F 1214 95.72 1298 accept 0 ALIGNMENT 624 YS2-2c04.q1k chr14 927 36 395081 395955 C 892 91.93 1362 accept 0 ALIGNMENT 193 YS2-2c05.p1k chr02 244 28 103001 103220 C 217 98.62 261 accept 0 ALIGNMENT 0 YS2-2c05.p1k chr02 261 245 103002 103001 C 17 0.00 261 accept 0 ALIGNMENT 586 YS2-2c06.q1k chr11 768 51 466168 466878 C 718 95.68 1424 accept 0 ALIGNMENT 1023 YS2-2c06.p1k chr11 22 1245 461934 463170 F 1224 95.42 1325 accept 0 ALIGNMENT 1061 YS2-2c07.p1k chr04 1295 33 212889 214162 C 1263 95.41 1313 accept_chi 0 ALIGNMENT 295 YS2-2c07.q1k chr07 854 29 552031 552850 C 826 80.27 1281 reject_low 2 ALIGNMENT 676 YS2-2c07.q1k chr12 945 29 813618 814522 C 917 93.24 1281 accept_chi 1 ALIGNMENT 756 YS2-2c08.p1k chr02 1194 287 804020 804929 C 908 94.93 1324 accept 0 ALIGNMENT 0 YS2-2c08.p1k chr02 286 62 804930 804929 C 225 0.00 1324 accept 0 ALIGNMENT 51 YS2-2c08.p1k chr07 200 140 1076130 1076190 C 61 95.08 1324 reject_low 3 ALIGNMENT 0 YS2-2c08.p1k chr07 887 343 1076136 1076135 C 545 0.00 1324 reject_low 4 ALIGNMENT 0 YS2-2c08.p1k chr02 887 150 804774 804773 C 738 0.00 1324 reject_low 1 ALIGNMENT 567 YS2-2c08.q1k chr02 36 905 801876 802727 F 870 91.38 1347 accept 0 ALIGNMENT 0 YS2-2c08.p1k chr07 887 201 1076131 1076130 C 687 0.00 1324 reject_low 3 ALIGNMENT 0 YS2-2c08.p1k chr07 139 62 1076191 1076190 C 78 0.00 1324 reject_low 3 ALIGNMENT 50 YS2-2c08.p1k chr07 342 287 1076135 1076190 C 56 96.43 1324 reject_low 4 ALIGNMENT 0 YS2-2c08.p1k chr02 139 62 804930 804929 C 78 0.00 1324 reject_low 2 ALIGNMENT 0 YS2-2c08.p1k chr07 286 62 1076191 1076190 C 225 0.00 1324 reject_low 4 ALIGNMENT 139 YS2-2c08.p1k chr02 296 140 804773 804929 C 157 96.82 1324 reject_low 2 ALIGNMENT 112 YS2-2c08.p1k chr02 149 30 804773 804892 C 120 98.33 1324 reject_low 1 ALIGNMENT 0 YS2-2c08.p1k chr02 887 297 804774 804773 C 591 0.00 1324 reject_low 2 ALIGNMENT 1020 YS2-2c09.p1k chr15 1144 31 768679 769809 C 1114 97.76 1294 accept 0 ALIGNMENT 444 YS2-2c09.q1k chr15 57 724 765193 765854 F 668 91.17 1446 accept 0 ALIGNMENT 0 YS2-2c10.p1k chr12 716 730 806248 806247 F 15 0.00 730 accept 0 ALIGNMENT 667 YS2-2c10.p1k chr12 31 715 805564 806248 F 685 100.00 730 accept 0 ALIGNMENT 537 YS2-2c12.q1k chr14 45 787 721591 722324 F 743 93.00 1400 accept 0 ALIGNMENT 1064 YS2-2c12.p1k chr14 1305 31 722869 724164 C 1275 95.53 1360 accept 0 ALIGNMENT 0 YS2-2c13.p1k chr08 698 681 358550 358549 C 18 0.00 698 reject_low 2 ALIGNMENT 606 YS2-2c13.p1k chr07 680 30 440789 441439 C 651 99.54 698 accept 0 ALIGNMENT 0 YS2-2c13.p1k chr07 698 681 440790 440789 C 18 0.00 698 accept 0 ALIGNMENT 24 YS2-2c13.p1k chr08 680 649 358549 358581 C 32 93.75 698 reject_low 2 ALIGNMENT 0 YS2-2c13.p1k chr08 648 62 358582 358581 C 587 0.00 698 reject_low 2 ALIGNMENT 27 YS2-2c13.p1k chr16 680 653 622605 622632 C 28 100.00 698 reject_low 1 ALIGNMENT 0 YS2-2c13.p1k chr16 698 681 622606 622605 C 18 0.00 698 reject_low 1 ALIGNMENT 0 YS2-2c13.p1k chr16 652 62 622633 622632 C 591 0.00 698 reject_low 1 ALIGNMENT 848 YS2-2c14.p1k chr12 33 1195 457884 459011 F 1163 93.21 1308 accept 0 ALIGNMENT 848 YS2-2c14.p1k chr12 33 1195 467021 468148 F 1163 93.21 1308 reject_low 1 ALIGNMENT 440 YS2-2c14.q1k chr12 622 49 463329 463889 C 574 93.73 1454 accept 0 ALIGNMENT 440 YS2-2c14.q1k chr12 622 49 454192 454752 C 574 93.73 1454 reject_low 2 ALIGNMENT 736 YS2-2c16.q1k chr10 1 990 315799 316778 F 990 92.53 1146 accept 0 ALIGNMENT 899 YS2-2c16.p1k chr10 1091 30 319052 320115 C 1062 95.67 1278 accept 0 ALIGNMENT 202 YS2-2c18.q1k chr15 112 332 327266 327484 F 221 98.19 1442 accept_chi 1 ALIGNMENT 0 YS2-2c18.q1k vc_4 373 373 5871 6353 F 1 0.00 1442 reject_low 9 ALIGNMENT 0 YS2-2c18.q1k vc_5 334 137 5064 5063 C 198 0.00 1442 reject_low 14 ALIGNMENT 0 YS2-2c18.q1k vc_7 373 137 2727 2726 C 237 0.00 1442 reject_low 6 ALIGNMENT 47 YS2-2c18.q1k vc_7 684 583 5073 5172 C 102 84.31 1442|0,1 reject_low 18 ALIGNMENT 0 YS2-2c18.q1k vc_2 137 373 2165 2164 F 237 0.00 1442 reject_low 3 ALIGNMENT 36 YS2-2c18.q1k vc_5 370 335 1 36 C 36 100.00 1442 reject_low 17 ALIGNMENT 214 YS2-2c18.q1k vc_4 684 374 5501 5811 C 311 90.68 1442 reject_low 7 ALIGNMENT 0 YS2-2c18.q1k chr15 333 350 327484 327483 F 18 0.00 1442 accept_chi 1 ALIGNMENT 0 YS2-2c18.q1k vc_7 137 335 63 62 F 199 0.00 1442 reject_low 15 ALIGNMENT 0 YS2-2c18.q1k vc_4 137 331 5830 5829 F 195 0.00 1442 reject_low 9 ALIGNMENT 0 YS2-2c18.q1k vc_5 334 137 37 36 C 198 0.00 1442 reject_low 17 ALIGNMENT 221 YS2-2c18.q1k vc_2 374 684 2165 2473 F 311 91.32 1442 reject_low 3 ALIGNMENT 41 YS2-2c18.q1k vc_2 372 332 2106 2146 C 41 100.00 1442 reject_low 12 ALIGNMENT 81 YS2-2c18.q1k vc_4 461 374 1446 1533 C 88 97.73 1442 reject_low 10 ALIGNMENT 41 YS2-2c18.q1k vc_1 372 332 2473 2513 C 41 100.00 1442 reject_low 11 ALIGNMENT 0 YS2-2c18.q1k vc_2 331 137 2147 2146 C 195 0.00 1442 reject_low 12 ALIGNMENT 41 YS2-2c18.q1k vc_3 372 332 2473 2513 C 41 100.00 1442 reject_low 13 ALIGNMENT 0 YS2-2c18.q1k vc_7 532 137 6412 6411 C 396 0.00 1442 reject_low 18 ALIGNMENT 41 YS2-2c18.q1k vc_4 332 372 5830 5870 F 41 100.00 1442 reject_low 9 ALIGNMENT 0 YS2-2c18.q1k vc_1 331 137 2514 2513 C 195 0.00 1442 reject_low 11 ALIGNMENT 37 YS2-2c18.q1k vc_7 336 372 13525 13561 F 37 100.00 1442 reject_low 16 ALIGNMENT 0 YS2-2c18.q1k vc_4 373 137 1534 1533 C 237 0.00 1442 reject_low 10 ALIGNMENT 0 YS2-2c18.q1k vc_3 331 137 2514 2513 C 195 0.00 1442 reject_low 13 ALIGNMENT 221 YS2-2c18.q1k vc_7 684 374 2418 2726 C 311 91.32 1442 reject_low 6 ALIGNMENT 38 YS2-2c18.q1k vc_5 372 335 5026 5063 C 38 100.00 1442 reject_low 14 ALIGNMENT 0 YS2-2c18.q1k vc_1 137 373 2532 2531 F 237 0.00 1442 reject_low 2 ALIGNMENT 0 YS2-2c18.q1k vc_4 373 137 5812 5811 C 237 0.00 1442 reject_low 7 ALIGNMENT 138 YS2-2c18.q1k vc_4 374 534 6354 6514 F 161 95.65 1442 reject_low 9 ALIGNMENT 0 YS2-2c18.q1k vc_4 137 373 127 126 F 237 0.00 1442 reject_low 8 ALIGNMENT 0 YS2-2c18.q1k vc_5 137 373 2399 2398 F 237 0.00 1442 reject_low 5 ALIGNMENT 37 YS2-2c18.q1k vc_7 336 372 63 99 F 37 100.00 1442 reject_low 15 ALIGNMENT 0 YS2-2c18.q1k vc_7 583 584 5172 6360 C 0 0.00 1442 reject_low 18 ALIGNMENT 0 YS2-2c18.q1k vc_3 137 373 2532 2531 F 237 0.00 1442 reject_low 4 ALIGNMENT 35 YS2-2c18.q1k vc_7 584 533 6360 6411 C 52 90.38 1442|1,0 reject_low 18 ALIGNMENT 243 YS2-2c18.p1k chr15 283 31 327231 327484 C 253 99.60 284 accept_chi 0 ALIGNMENT 221 YS2-2c18.q1k vc_1 374 684 2532 2840 F 311 91.32 1442 reject_low 2 ALIGNMENT 221 YS2-2c18.q1k vc_5 374 684 2399 2707 F 311 91.32 1442 reject_low 5 ALIGNMENT 0 YS2-2c18.q1k vc_7 137 335 13525 13524 F 199 0.00 1442 reject_low 16 ALIGNMENT 221 YS2-2c18.q1k vc_3 374 684 2532 2840 F 311 91.32 1442 reject_low 4 ALIGNMENT 138 YS2-2c18.q1k vc_4 374 534 127 287 F 161 95.65 1442 reject_low 8 ALIGNMENT 767 YS2-2c19.p1k chr11 862 26 78504 79344 C 837 98.45 863 accept_chi 0 ALIGNMENT 347 YS2-2c19.q1k chr11 71 607 78506 79041 F 537 89.76 1364 accept_chi 1 ALIGNMENT 557 YS2-2c20.q1k chr14 43 717 364945 365614 F 675 95.56 1373 accept 0 ALIGNMENT 1043 YS2-2c20.p1k chr14 1185 29 365520 366689 C 1157 97.67 1286 accept 0 ALIGNMENT 843 YS2-2c21.p1k chr08 1069 30 375066 376118 C 1040 94.62 1092 accept 0 ALIGNMENT 600 YS2-2c21.q1k chr08 73 749 370754 371429 F 677 97.19 1414 accept 0 ALIGNMENT 0 YS2-2c22.q1k vc_5 262 246 2 1 C 17 0.00 1300 reject_low 18 ALIGNMENT 147 YS2-2c22.q1k chr12 207 48 463792 463952 C 160 98.12 1300 accept 1 ALIGNMENT 147 YS2-2c22.q1k chr12 207 48 454655 454815 C 160 98.12 1300 accept 0 ALIGNMENT 153 YS2-2c22.q1k vc_4 248 409 6353 6514 F 162 98.77 1300|1,0 reject_low 9 ALIGNMENT 264 YS2-2c22.q1k vc_4 642 248 5421 5812 C 395 90.38 1300 reject_low 7 ALIGNMENT 45 YS2-2c22.q1k vc_7 459 408 6360 6411 C 52 96.15 1300|1,0 reject_low 11 ALIGNMENT 271 YS2-2c22.q1k vc_7 642 248 2338 2727 C 395 90.89 1300 reject_low 6 ALIGNMENT 0 YS2-2c22.p1k chr12 197 215 454815 454814 F 19 0.00 215 accept 0 ALIGNMENT 0 YS2-2c22.q1k vc_2 207 108 2146 2145 C 100 0.00 1300 reject_low 13 ALIGNMENT 271 YS2-2c22.q1k vc_5 248 642 2398 2787 F 395 90.89 1300 reject_low 5 ALIGNMENT 36 YS2-2c22.q1k vc_5 245 210 1 36 C 36 100.00 1300 reject_low 18 ALIGNMENT 41 YS2-2c22.q1k vc_4 208 248 5831 5871 F 41 100.00 1300 reject_low 9 ALIGNMENT 0 YS2-2c22.q1k vc_5 108 247 2398 2397 F 140 0.00 1300 reject_low 5 ALIGNMENT 0 YS2-2c22.q1k vc_4 108 207 5831 5830 F 100 0.00 1300 reject_low 9 ALIGNMENT 0 YS2-2c22.q1k vc_4 249 248 5872 6353 F 0 0.00 1300 reject_low 9 ALIGNMENT 39 YS2-2c22.q1k vc_5 248 210 5025 5063 C 39 100.00 1300 reject_low 15 ALIGNMENT 153 YS2-2c22.q1k vc_4 248 409 126 287 F 162 98.77 1300 reject_low 8 ALIGNMENT 0 YS2-2c22.q1k vc_7 458 459 5172 6360 C 0 0.00 1300 reject_low 11 ALIGNMENT 85 YS2-2c22.q1k vc_4 336 248 1446 1534 C 89 98.88 1300 reject_low 10 ALIGNMENT 0 YS2-2c22.q1k chr12 262 208 454656 454655 C 55 0.00 1300 accept 0 ALIGNMENT 0 YS2-2c22.q1k vc_7 247 108 2728 2727 C 140 0.00 1300 reject_low 6 ALIGNMENT 38 YS2-2c22.q1k vc_7 211 248 13525 13562 F 38 100.00 1300 reject_low 17 ALIGNMENT 0 YS2-2c22.q1k vc_3 207 108 2513 2512 C 100 0.00 1300 reject_low 14 ALIGNMENT 0 YS2-2c22.p1k chr12 197 215 463952 463951 F 19 0.00 215 accept 1 ALIGNMENT 271 YS2-2c22.q1k vc_3 248 642 2531 2920 F 395 90.89 1300 reject_low 4 ALIGNMENT 0 YS2-2c22.q1k vc_1 108 247 2531 2530 F 140 0.00 1300 reject_low 2 ALIGNMENT 158 YS2-2c22.p1k chr12 32 196 454651 454815 F 165 99.39 215 accept 0 ALIGNMENT 41 YS2-2c22.q1k vc_3 248 208 2472 2512 C 41 100.00 1300 reject_low 14 ALIGNMENT 0 YS2-2c22.q1k vc_4 247 108 1535 1534 C 140 0.00 1300 reject_low 10 ALIGNMENT 0 YS2-2c22.q1k vc_3 108 247 2531 2530 F 140 0.00 1300 reject_low 4 ALIGNMENT 0 YS2-2c22.q1k vc_4 247 108 5813 5812 C 140 0.00 1300 reject_low 7 ALIGNMENT 0 YS2-2c22.q1k vc_4 108 247 126 125 F 140 0.00 1300 reject_low 8 ALIGNMENT 0 YS2-2c22.q1k vc_7 108 210 63 62 F 103 0.00 1300 reject_low 16 ALIGNMENT 271 YS2-2c22.q1k vc_2 248 642 2164 2553 F 395 90.89 1300 reject_low 3 ALIGNMENT 71 YS2-2c22.q1k vc_7 642 458 4993 5172 C 185 82.16 1300|0,1 reject_low 11 ALIGNMENT 0 YS2-2c22.q1k vc_1 207 108 2513 2512 C 100 0.00 1300 reject_low 12 ALIGNMENT 41 YS2-2c22.q1k vc_2 248 208 2105 2145 C 41 100.00 1300 reject_low 13 ALIGNMENT 0 YS2-2c22.q1k vc_7 407 108 6412 6411 C 300 0.00 1300 reject_low 11 ALIGNMENT 0 YS2-2c22.q1k chr12 262 208 463793 463792 C 55 0.00 1300 accept 1 ALIGNMENT 0 YS2-2c22.q1k vc_5 209 108 5064 5063 C 102 0.00 1300 reject_low 15 ALIGNMENT 271 YS2-2c22.q1k vc_1 248 642 2531 2920 F 395 90.89 1300 reject_low 2 ALIGNMENT 0 YS2-2c22.q1k vc_2 108 247 2164 2163 F 140 0.00 1300 reject_low 3 ALIGNMENT 41 YS2-2c22.q1k vc_1 248 208 2472 2512 C 41 100.00 1300 reject_low 12 ALIGNMENT 0 YS2-2c22.q1k vc_7 108 210 13525 13524 F 103 0.00 1300 reject_low 17 ALIGNMENT 38 YS2-2c22.q1k vc_7 211 248 63 100 F 38 100.00 1300 reject_low 16 ALIGNMENT 0 YS2-2c22.q1k vc_5 209 108 37 36 C 102 0.00 1300 reject_low 18 ALIGNMENT 158 YS2-2c22.p1k chr12 32 196 463788 463952 F 165 99.39 215 accept 1 ALIGNMENT 0 YS2-2c23.q1k vc_2 365 137 2150 2149 C 229 0.00 1345 reject_low 16 ALIGNMENT 0 YS2-2c23.q1k vc_4 137 365 5827 5826 F 229 0.00 1345 reject_low 13 ALIGNMENT 30 YS2-2c23.q1k vc_5 407 372 1 36 C 36 94.44 1345 reject_low 19 ALIGNMENT 355 YS2-2c23.p1k vc_5 528 1 4154 4669 C 528 90.72 532 reject_low 1 ALIGNMENT 348 YS2-2c23.p1k vc_7 1 528 13918 14433 F 528 89.96 532 reject_low 7 ALIGNMENT 0 YS2-2c23.q1k vc_1 137 416 2537 2536 F 280 0.00 1345 reject_low 8 ALIGNMENT 0 YS2-2c23.q1k vc_5 137 416 2404 2403 F 280 0.00 1345 reject_low 1 ALIGNMENT 0 YS2-2c23.q1k vc_4 416 137 5807 5806 C 280 0.00 1345 reject_low 11 ALIGNMENT 355 YS2-2c23.p1k vc_6 1 528 3712 4227 F 528 90.53 532 reject_low 3 ALIGNMENT 0 YS2-2c23.q1k vc_2 137 416 2170 2169 F 280 0.00 1345 reject_low 9 ALIGNMENT 37 YS2-2c23.q1k vc_2 409 366 2106 2149 C 44 95.45 1345 reject_low 16 ALIGNMENT 0 YS2-2c23.q1k vc_4 137 416 132 131 F 280 0.00 1345 reject_low 12 ALIGNMENT 348 YS2-2c23.p1k vc_7 1 528 456 971 F 528 89.96 532 reject_low 2 ALIGNMENT 73 YS2-2c23.q1k vc_4 497 417 1448 1528 C 81 97.53 1345 reject_low 14 ALIGNMENT 205 YS2-2c23.q1k vc_5 417 750 2404 2731 F 334 88.92 1345 reject_low 1 ALIGNMENT 205 YS2-2c23.q1k vc_1 417 750 2537 2864 F 334 88.92 1345 reject_low 8 ALIGNMENT 244 YS2-2c23.q1k chr08 369 82 60012 60299 C 288 96.18 1345 accept 0 ALIGNMENT 205 YS2-2c23.q1k vc_3 417 750 2537 2864 F 334 88.92 1345 reject_low 10 ALIGNMENT 37 YS2-2c23.q1k vc_3 409 366 2473 2516 C 44 95.45 1345 reject_low 17 ALIGNMENT 0 YS2-2c23.q1k vc_5 371 137 37 36 C 235 0.00 1345 reject_low 19 ALIGNMENT 199 YS2-2c23.q1k vc_4 750 417 5477 5806 C 334 88.32 1345 reject_low 11 ALIGNMENT 0 YS2-2c23.q1k vc_7 416 137 2722 2721 C 280 0.00 1345 reject_low 2 ALIGNMENT 0 YS2-2c23.q1k vc_4 416 137 1529 1528 C 280 0.00 1345 reject_low 14 ALIGNMENT 138 YS2-2c23.q1k vc_4 417 572 132 287 F 156 96.79 1345 reject_low 12 ALIGNMENT 138 YS2-2c23.q1k vc_4 417 572 6359 6514 F 156 96.79 1345 reject_low 13 ALIGNMENT 352 YS2-2c23.p1k vc_2 528 1 1234 1749 C 528 90.53 532 reject_low 5 ALIGNMENT 352 YS2-2c23.p1k vc_1 528 1 1234 1749 C 528 90.53 532 reject_low 4 ALIGNMENT 0 YS2-2c23.q1k vc_1 365 137 2517 2516 C 229 0.00 1345 reject_low 15 ALIGNMENT 37 YS2-2c23.q1k vc_1 409 366 2473 2516 C 44 95.45 1345 reject_low 15 ALIGNMENT 205 YS2-2c23.q1k vc_2 417 750 2170 2497 F 334 88.92 1345 reject_low 9 ALIGNMENT 0 YS2-2c23.q1k vc_5 371 137 5064 5063 C 235 0.00 1345 reject_low 18 ALIGNMENT 32 YS2-2c23.q1k vc_5 409 372 5026 5063 C 38 94.74 1345 reject_low 18 ALIGNMENT 0 YS2-2c23.q1k vc_3 365 137 2517 2516 C 229 0.00 1345 reject_low 17 ALIGNMENT 0 YS2-2c23.q1k vc_4 410 416 5871 6358 F 7 0.00 1345 reject_low 13 ALIGNMENT 206 YS2-2c23.q1k vc_7 750 417 2394 2721 C 334 88.92 1345 reject_low 2 ALIGNMENT 352 YS2-2c23.p1k vc_3 528 1 1234 1749 C 528 90.53 532 reject_low 6 ALIGNMENT 0 YS2-2c23.q1k vc_3 137 416 2537 2536 F 280 0.00 1345 reject_low 10 ALIGNMENT 37 YS2-2c23.q1k vc_4 366 409 5827 5870 F 44 95.45 1345 reject_low 13 ALIGNMENT 807 YS2-2c24.p1k chr10 24 998 467323 468285 F 975 95.28 1265 accept_chi 0 ALIGNMENT 446 YS2-2c24.q1k chr10 648 120 483890 484409 C 529 96.41 1295 accept_chi 1 ALIGNMENT 0 YS2-2d01.q1k vc_4 62 215 126 125 F 154 0.00 1271 reject_low 8 ALIGNMENT 0 YS2-2d01.q1k vc_4 378 519 6514 6513 F 142 0.00 1271 reject_low 10 ALIGNMENT 0 YS2-2d01.q1k vc_3 519 217 2473 2472 C 303 0.00 1271 reject_low 14 ALIGNMENT 0 YS2-2d01.q1k vc_1 519 217 2473 2472 C 303 0.00 1271 reject_low 12 ALIGNMENT 0 YS2-2d01.q1k vc_1 175 62 2513 2512 C 114 0.00 1271 reject_low 12 ALIGNMENT 0 YS2-2d01.q1k vc_2 519 217 2106 2105 C 303 0.00 1271 reject_low 13 ALIGNMENT 41 YS2-2d01.q1k vc_2 216 176 2105 2145 C 41 100.00 1271 reject_low 13 ALIGNMENT 393 YS2-2d01.q1k vc_1 216 674 2531 2991 F 459 95.64 1271 reject_vc 5 ALIGNMENT 0 YS2-2d01.q1k vc_4 519 305 1447 1446 C 215 0.00 1271 reject_low 11 ALIGNMENT 435 YS2-2d01.q1k vc_7 807 216 2142 2727 C 592 92.40 1271 reject_vc 3 ALIGNMENT 41 YS2-2d01.q1k vc_3 216 176 2472 2512 C 41 100.00 1271 reject_low 14 ALIGNMENT 36 YS2-2d01.q1k vc_7 797 676 4585 4699 C 122 81.15 1271 reject_low 9 ALIGNMENT 0 YS2-2d01.q1k vc_4 215 62 5813 5812 C 154 0.00 1271 reject_vc 4 ALIGNMENT 425 YS2-2d01.q1k vc_4 797 216 5234 5812 C 582 92.27 1271 reject_vc 4 ALIGNMENT 0 YS2-2d01.q1k vc_7 62 178 13525 13524 F 117 0.00 1271 reject_low 16 ALIGNMENT 0 YS2-2d01.q1k vc_5 519 217 5026 5025 C 303 0.00 1271 reject_low 15 ALIGNMENT 0 YS2-2d01.q1k vc_4 215 62 1535 1534 C 154 0.00 1271 reject_low 11 ALIGNMENT 0 YS2-2d01.q1k vc_1 62 215 2531 2530 F 154 0.00 1271 reject_vc 5 ALIGNMENT 393 YS2-2d01.q1k vc_3 216 674 2531 2991 F 459 95.64 1271 reject_vc 7 ALIGNMENT 0 YS2-2d01.q1k vc_2 175 62 2146 2145 C 114 0.00 1271 reject_low 13 ALIGNMENT 159 YS2-2d01.q1k vc_4 216 377 126 287 F 162 100.00 1271 reject_low 8 ALIGNMENT 159 YS2-2d01.q1k vc_4 216 377 6353 6514 F 162 100.00 1271|1,0 reject_low 10 ALIGNMENT 0 YS2-2d01.q1k chr04 519 176 1470511 1470510 C 344 0.00 1271 accept_chi 1 ALIGNMENT 0 YS2-2d01.q1k vc_2 62 215 2164 2163 F 154 0.00 1271 reject_vc 6 ALIGNMENT 0 YS2-2d01.q1k vc_7 375 62 6412 6411 C 314 0.00 1271 reject_low 9 ALIGNMENT 0 YS2-2d01.q1k vc_4 378 519 287 286 F 142 0.00 1271 reject_low 8 ALIGNMENT 0 YS2-2d01.q1k vc_5 177 62 5064 5063 C 116 0.00 1271 reject_low 15 ALIGNMENT 0 YS2-2d01.q1k vc_7 217 519 13562 13561 F 303 0.00 1271 reject_low 16 ALIGNMENT 41 YS2-2d01.q1k vc_4 176 216 5831 5871 F 41 100.00 1271 reject_low 10 ALIGNMENT 36 YS2-2d01.q1k vc_5 213 178 1 36 C 36 100.00 1271 reject_low 17 ALIGNMENT 0 YS2-2d01.q1k vc_3 62 215 2531 2530 F 154 0.00 1271 reject_vc 7 ALIGNMENT 39 YS2-2d01.q1k vc_5 216 178 5025 5063 C 39 100.00 1271 reject_low 15 ALIGNMENT 185 YS2-2d01.q1k vc_7 674 426 4922 5172 C 249 91.97 1271|0,1 reject_low 9 ALIGNMENT 151 YS2-2d01.q1k chr04 175 21 1470510 1470664 C 155 100.00 1271 accept_chi 1 ALIGNMENT 87 YS2-2d01.q1k vc_4 304 216 1446 1534 C 89 100.00 1271 reject_low 11 ALIGNMENT 0 YS2-2d01.q1k vc_4 217 216 5872 6353 F 0 0.00 1271 reject_low 10 ALIGNMENT 0 YS2-2d01.q1k vc_4 62 175 5831 5830 F 114 0.00 1271 reject_low 10 ALIGNMENT 393 YS2-2d01.q1k vc_2 216 674 2164 2624 F 459 95.64 1271 reject_vc 6 ALIGNMENT 0 YS2-2d01.q1k vc_3 175 62 2513 2512 C 114 0.00 1271 reject_low 14 ALIGNMENT 194 YS2-2d01.p1k chr04 35 233 1470510 1470708 F 199 100.00 251 accept_chi 0 ALIGNMENT 0 YS2-2d01.q1k vc_5 519 214 2 1 C 306 0.00 1271 reject_low 17 ALIGNMENT 48 YS2-2d01.q1k vc_7 427 376 6360 6411 C 52 98.08 1271|1,0 reject_low 9 ALIGNMENT 0 YS2-2d01.q1k vc_5 177 62 37 36 C 116 0.00 1271 reject_low 17 ALIGNMENT 0 YS2-2d01.q1k vc_5 62 215 2398 2397 F 154 0.00 1271 reject_vc 2 ALIGNMENT 38 YS2-2d01.q1k vc_7 179 216 13525 13562 F 38 100.00 1271 reject_low 16 ALIGNMENT 0 YS2-2d01.q1k vc_7 215 62 2728 2727 C 154 0.00 1271 reject_vc 3 ALIGNMENT 0 YS2-2d01.p1k chr04 234 251 1470708 1470707 F 18 0.00 251 accept_chi 0 ALIGNMENT 0 YS2-2d01.q1k vc_7 426 427 5172 6360 C 0 0.00 1271 reject_low 9 ALIGNMENT 435 YS2-2d01.q1k vc_5 216 807 2398 2983 F 592 92.40 1271 reject_vc 2 ALIGNMENT 0 YS2-2d01.q1k vc_7 675 675 4700 4921 C 1 0.00 1271 reject_low 9 ALIGNMENT 41 YS2-2d01.q1k vc_1 216 176 2472 2512 C 41 100.00 1271 reject_low 12 ALIGNMENT 0 YS2-2d02.q1k vc_5 312 150 37 36 C 163 0.00 1402 reject_low 21 ALIGNMENT 145 YS2-2d02.q1k vc_4 351 512 6353 6514 F 162 96.91 1402 reject_low 13 ALIGNMENT 0 YS2-2d02.q1k vc_2 150 350 2164 2163 F 201 0.00 1402 reject_low 9 ALIGNMENT 0 YS2-2d02.q1k vc_7 561 562 5172 6360 C 0 0.00 1402 reject_low 14 ALIGNMENT 0 YS2-2d02.q1k vc_4 150 350 126 125 F 201 0.00 1402 reject_low 12 ALIGNMENT 0 YS2-2d02.q1k vc_1 447 350 2475 2474 C 98 0.00 1402 reject_low 16 ALIGNMENT 36 YS2-2d02.q1k vc_5 348 313 1 36 C 36 100.00 1402 reject_low 21 ALIGNMENT 0 YS2-2d02.q1k vc_1 310 150 2513 2512 C 161 0.00 1402 reject_low 16 ALIGNMENT 0 YS2-2d02.q1k vc_5 447 350 5028 5027 C 98 0.00 1402 reject_low 19 ALIGNMENT 0 YS2-2d02.q1k vc_3 310 150 2513 2512 C 161 0.00 1402 reject_low 18 ALIGNMENT 39 YS2-2d02.q1k vc_3 349 311 2474 2512 C 39 100.00 1402 reject_low 18 ALIGNMENT 0 YS2-2d02.q1k vc_2 310 150 2146 2145 C 161 0.00 1402 reject_low 17 ALIGNMENT 0 YS2-2d02.q1k vc_7 510 150 6412 6411 C 361 0.00 1402 reject_low 14 ALIGNMENT 37 YS2-2d02.q1k vc_5 349 313 5027 5063 C 37 100.00 1402 reject_low 19 ALIGNMENT 419 YS2-2d02.p1k vc_6 1 598 3712 4322 F 598 91.64 645 reject_low 3 ALIGNMENT 284 YS2-2d02.q1k vc_2 351 717 2164 2527 F 367 93.19 1402 reject_low 9 ALIGNMENT 416 YS2-2d02.p1k vc_2 598 1 1139 1749 C 598 91.47 645 reject_low 5 ALIGNMENT 0 YS2-2d02.q1k vc_2 447 350 2108 2107 C 98 0.00 1402 reject_low 17 ALIGNMENT 0 YS2-2d02.q1k vc_4 350 150 5813 5812 C 201 0.00 1402 reject_low 11 ALIGNMENT 0 YS2-2d02.q1k vc_4 350 150 1535 1534 C 201 0.00 1402 reject_low 15 ALIGNMENT 410 YS2-2d02.p1k vc_7 1 598 456 1066 F 598 91.14 645 reject_vc 2 ALIGNMENT 0 YS2-2d02.q1k vc_4 150 310 5831 5830 F 161 0.00 1402 reject_low 13 ALIGNMENT 416 YS2-2d02.p1k vc_1 598 1 1139 1749 C 598 91.47 645 reject_low 4 ALIGNMENT 91 YS2-2d02.q1k vc_7 717 561 5019 5172 C 157 87.26 1402|0,1 reject_low 14 ALIGNMENT 284 YS2-2d02.q1k vc_7 717 351 2364 2727 C 367 93.19 1402 reject_vc 2 ALIGNMENT 0 YS2-2d02.q1k vc_5 150 350 2398 2397 F 201 0.00 1402 reject_vc 1 ALIGNMENT 284 YS2-2d02.q1k vc_1 351 717 2531 2894 F 367 93.19 1402 reject_low 8 ALIGNMENT 416 YS2-2d02.p1k vc_3 598 1 1139 1749 C 598 91.47 645 reject_low 6 ALIGNMENT 0 YS2-2d02.q1k vc_3 150 350 2531 2530 F 201 0.00 1402 reject_low 10 ALIGNMENT 39 YS2-2d02.q1k vc_4 311 349 5831 5869 F 39 100.00 1402 reject_low 13 ALIGNMENT 0 YS2-2d02.q1k vc_3 447 350 2475 2474 C 98 0.00 1402 reject_low 18 ALIGNMENT 36 YS2-2d02.q1k vc_7 314 349 13525 13560 F 36 100.00 1402 reject_low 20 ALIGNMENT 284 YS2-2d02.q1k vc_3 351 717 2531 2894 F 367 93.19 1402 reject_low 10 ALIGNMENT 0 YS2-2d02.q1k vc_5 312 150 5064 5063 C 163 0.00 1402 reject_low 19 ALIGNMENT 145 YS2-2d02.q1k vc_4 351 512 126 287 F 162 96.91 1402 reject_low 12 ALIGNMENT 419 YS2-2d02.p1k vc_5 598 1 4059 4669 C 598 91.64 645 reject_vc 1 ALIGNMENT 284 YS2-2d02.q1k vc_5 351 717 2398 2761 F 367 93.19 1402 reject_vc 1 ALIGNMENT 232 YS2-2d02.q1k chr11 314 64 165203 165453 C 251 98.41 1402 accept 0 ALIGNMENT 277 YS2-2d02.q1k vc_4 717 351 5447 5812 C 367 92.64 1402 reject_low 11 ALIGNMENT 0 YS2-2d02.q1k vc_1 150 350 2531 2530 F 201 0.00 1402 reject_low 8 ALIGNMENT 0 YS2-2d02.q1k vc_7 350 150 2728 2727 C 201 0.00 1402 reject_vc 2 ALIGNMENT 410 YS2-2d02.p1k vc_7 1 598 13918 14528 F 598 91.14 645 reject_low 7 ALIGNMENT 0 YS2-2d02.q1k vc_5 447 349 2 1 C 99 0.00 1402 reject_low 21 ALIGNMENT 39 YS2-2d02.q1k vc_2 349 311 2107 2145 C 39 100.00 1402 reject_low 17 ALIGNMENT 0 YS2-2d02.q1k vc_7 150 313 13525 13524 F 164 0.00 1402 reject_low 20 ALIGNMENT 0 YS2-2d02.q1k vc_4 350 350 5870 6352 F 1 0.00 1402 reject_low 13 ALIGNMENT 0 YS2-2d02.q1k chr11 447 315 165204 165203 C 133 0.00 1402 accept 0 ALIGNMENT 79 YS2-2d02.q1k vc_4 439 351 1446 1534 C 89 96.63 1402 reject_low 15 ALIGNMENT 48 YS2-2d02.q1k vc_7 562 511 6360 6411 C 52 98.08 1402|1,0 reject_low 14 ALIGNMENT 0 YS2-2d02.q1k vc_7 350 447 13560 13559 F 98 0.00 1402 reject_low 20 ALIGNMENT 39 YS2-2d02.q1k vc_1 349 311 2474 2512 C 39 100.00 1402 reject_low 16 ALIGNMENT 0 YS2-2d03.p1k chr09 283 62 412878 412877 C 222 0.00 445 reject_low 1 ALIGNMENT 133 YS2-2d03.p1k chr09 426 284 412735 412877 C 143 100.00 445 reject_low 1 ALIGNMENT 76 YS2-2d03.q1k chr09 54 201 412735 412877 F 148 87.84 1597 reject_low 2 ALIGNMENT 0 YS2-2d03.p1k chr09 445 427 412736 412735 C 19 0.00 445 reject_low 1 ALIGNMENT 0 YS2-2d03.p1k chr04 285 445 1027134 1027133 F 161 0.00 445 accept 0 ALIGNMENT 240 YS2-2d03.p1k chr04 35 284 1026884 1027134 F 250 99.60 445 accept 0 ALIGNMENT 165 YS2-2d03.q1k chr04 453 201 1026887 1027134 C 253 90.51 1597 accept 0 ALIGNMENT 176 YS2-2d05.p1k chr09 43 221 360402 360580 F 179 100.00 240 accept 0 ALIGNMENT 0 YS2-2d05.p1k chr09 222 240 360580 360579 F 19 0.00 240 accept 0 ALIGNMENT 467 YS2-2d06.q1k chr02 760 52 619701 620400 C 709 90.69 1356 accept 0 ALIGNMENT 972 YS2-2d06.p1k chr02 28 1176 617327 618490 F 1149 96.17 1301 accept 0 ALIGNMENT 960 YS2-2d07.p1k chr02 1252 32 499150 500394 C 1221 94.76 1315 accept 0 ALIGNMENT 552 YS2-2d07.q1k chr02 42 748 496162 496870 F 707 94.77 1344 accept 0 ALIGNMENT 950 YS2-2d08.p1k chr10 30 1099 662607 663689 F 1070 96.73 1271 accept 0 ALIGNMENT 611 YS2-2d08.q1k chr10 814 51 667128 667890 C 764 94.63 1338 accept 0 ALIGNMENT 541 YS2-2d10.q1k chr04 39 754 424372 425085 F 716 92.74 1382 accept 0 ALIGNMENT 917 YS2-2d10.p1k chr04 1078 29 427648 428710 C 1050 96.48 1279 accept 0 ALIGNMENT 936 YS2-2d11.p1k chr12 34 1087 27871 28934 F 1054 97.25 1294 accept 0 ALIGNMENT 577 YS2-2d11.q1k chr12 787 49 31490 32218 C 739 95.26 1608 accept 0 ALIGNMENT 1041 YS2-2d12.p1k chr12 38 1223 27871 29071 F 1186 96.88 1342 accept 0 ALIGNMENT 616 YS2-2d12.q1k chr12 802 1 31339 32141 C 802 94.39 1090 accept 0 ALIGNMENT 1098 YS2-2d13.p1k chr05 1252 35 148815 150032 C 1218 97.29 1326 accept 0 ALIGNMENT 1011 YS2-2d14.p1k chr12 33 1289 460550 461816 F 1257 94.59 1351 manual 0 ALIGNMENT 1005 YS2-2d14.p1k chr12 39 1289 451419 452679 F 1251 94.56 1351 manual 1 ALIGNMENT 666 YS2-2d14.q1k chr12 844 59 455997 456768 C 786 96.18 1392 manual 1 ALIGNMENT 642 YS2-2d14.p1k chr12 397 1184 489754 490543 F 788 94.42 1351 reject_low 2 ALIGNMENT 0 YS2-2d14.p1k chr12 62 396 489754 489753 F 335 0.00 1351 reject_low 2 ALIGNMENT 666 YS2-2d14.q1k chr12 844 59 465134 465905 C 786 96.18 1392 manual 0 ALIGNMENT 47 YS2-2d15.p1k chrm 628 543 2083 2163 C 86 88.37 1323 reject_low 21 ALIGNMENT 46 YS2-2d15.p1k chrm 996 849 64176 64323 C 148 86.49 1323 reject_bad_break 0 ALIGNMENT 38 YS2-2d15.p1k chrm 617 573 11504 11548 C 45 97.78 1323 reject_low 17 ALIGNMENT 33 YS2-2d15.p1k chrm 28 81 53218 53268 F 54 90.74 1323 reject_low 6 ALIGNMENT 0 YS2-2d15.p1k chrm 829 618 11505 11504 C 212 0.00 1323 reject_low 17 ALIGNMENT 0 YS2-2d15.p1k chrm 829 623 34928 34927 C 207 0.00 1323 reject_low 10 ALIGNMENT 0 YS2-2d15.p1k chrm 558 81 50169 50487 C 478 0.00 1323 reject_low 22 ALIGNMENT 38 YS2-2d15.p1k chrm 92 41 6179 6229 C 52 96.15 1323 reject_low 1 ALIGNMENT 590 YS2-2d15.p1k chrm 809 71 64323 65061 C 739 99.46 1323 reject_bad_break 0 ALIGNMENT 0 YS2-2d15.p1k chrm 647 829 52403 52402 F 183 0.00 1323 reject_low 3 ALIGNMENT 0 YS2-2d15.p1k chrm 813 62 53268 53267 C 752 0.00 1323 reject_low 13 ALIGNMENT 0 YS2-2d15.p1k chrm 572 62 11549 11548 C 511 0.00 1323 reject_low 17 ALIGNMENT 42 YS2-2d15.p1k chrm 537 622 2714 2801 F 86 86.05 1323 reject_low 19 ALIGNMENT 0 YS2-2d15.p1k chrm 62 572 12268 12267 F 511 0.00 1323 reject_low 4 ALIGNMENT 36 YS2-2d15.p1k chrm 814 888 6191 6266 F 75 82.67 1323 reject_low 19,20 ALIGNMENT 49 YS2-2d15.p1k chrm 573 643 12268 12336 F 71 92.96 1323 reject_low 4 ALIGNMENT 0 YS2-2d15.p1k chrm 829 620 52769 52768 C 210 0.00 1323 reject_low 12 ALIGNMENT 40 YS2-2d15.p1k chrm 619 546 52768 52841 C 74 85.14 1323 reject_low 12 ALIGNMENT 68 YS2-2d15.p1k chrm 635 556 10726 10804 C 80 96.25 1323 reject_low 2 ALIGNMENT 0 YS2-2d15.p1k chrm 848 810 64324 64322 C 39 0.00 1323 reject_bad_break 0 ALIGNMENT 31 YS2-2d15.p1k chrm 814 861 65066 65112 F 48 89.58 1323 reject_low 5 ALIGNMENT 0 YS2-2d15.p1k chrm 62 813 50769 50768 F 752 0.00 1323 reject_low 7 ALIGNMENT 0 YS2-2d15.p1k chrm 62 813 65066 65065 F 752 0.00 1323 reject_low 5 ALIGNMENT 0 YS2-2d15.p1k chrm 545 62 52842 52841 C 484 0.00 1323 reject_low 12 ALIGNMENT 44 YS2-2d15.p1k chrm 622 559 50103 50168 C 64 90.62 1323 reject_low 22 ALIGNMENT 0 YS2-2d15.p1k chrm 80 829 12392 12391 F 750 0.00 1323 reject_low 11 ALIGNMENT 0 YS2-2d15.p1k chrm 618 813 129 6190 F 196 0.00 1323 reject_low 20 ALIGNMENT 0 YS2-2d15.p1k chrm 829 623 50104 50103 C 207 0.00 1323 reject_low 22 ALIGNMENT 40 YS2-2d15.p1k chrm 622 574 11039 11088 C 49 95.92 1323 reject_low 15 ALIGNMENT 40 YS2-2d15.p1k chrm 566 617 76 128 F 52 94.23 1323 reject_low 20 ALIGNMENT 0 YS2-2d15.p1k chrm 829 93 6180 6179 C 737 0.00 1323 reject_low 1 ALIGNMENT 21 YS2-2d15.p1k chrm 80 38 50769 50815 C 43 86.05 1323 reject_low 16 ALIGNMENT 0 YS2-2d15.p1k chrm 547 62 35007 35006 C 486 0.00 1323 reject_low 10 ALIGNMENT 0 YS2-2d15.p1k chrm 62 813 50488 50487 F 752 0.00 1323 reject_low 9 ALIGNMENT 0 YS2-2d15.p1k chrm 62 572 9489 9488 F 511 0.00 1323 reject_low 14 ALIGNMENT 38 YS2-2d15.p1k chrm 80 39 50488 50529 C 42 100.00 1323 reject_low 22 ALIGNMENT 21 YS2-2d15.p1k chrm 851 814 53231 53267 C 38 89.47 1323 reject_low 13 ALIGNMENT 29 YS2-2d15.p1k chrm 33 79 12348 12392 F 47 91.49 1323 reject_low 11 ALIGNMENT 0 YS2-2d15.p1k chrm 555 62 10805 10804 C 494 0.00 1323 reject_low 2 ALIGNMENT 0 YS2-2d15.p1k chrm 82 829 53268 53267 F 748 0.00 1323 reject_low 6 ALIGNMENT 24 YS2-2d15.p1k chrm 814 851 2599 2637 F 38 92.11 1323 reject_low 8 ALIGNMENT 0 YS2-2d15.p1k chrm 70 71 65062 65075 C 0 0.00 1323 reject_bad_break 0 ALIGNMENT 38 YS2-2d15.p1k chrm 573 617 71213 71257 F 45 97.78 1323 reject_low 18 ALIGNMENT 0 YS2-2d15.p1k chrm 623 813 2802 6190 F 191 0.00 1323 reject_low 19 ALIGNMENT 0 YS2-2d15.p1k chrm 618 829 71257 71256 F 212 0.00 1323 reject_low 18 ALIGNMENT 0 YS2-2d15.p1k chrm 829 81 50770 50769 C 749 0.00 1323 reject_low 16 ALIGNMENT 0 YS2-2d15.p1k chrm 573 62 11089 11088 C 512 0.00 1323 reject_low 15 ALIGNMENT 41 YS2-2d15.p1k chrm 573 622 9489 9539 F 50 96.00 1323 reject_low 14 ALIGNMENT 0 YS2-2d15.p1k chrm 62 572 52331 52330 F 511 0.00 1323 reject_low 3 ALIGNMENT 0 YS2-2d15.p1k chrm 542 81 2164 2598 C 462 0.00 1323 reject_low 21 ALIGNMENT 0 YS2-2d15.p1k chrm 62 813 2599 2598 F 752 0.00 1323 reject_low 8 ALIGNMENT 30 YS2-2d15.p1k chrm 70 28 65076 65117 C 43 93.02 1323 reject_bad_break 0 ALIGNMENT 0 YS2-2d15.p1k chrm 829 636 10727 10726 C 194 0.00 1323 reject_low 2 ALIGNMENT 49 YS2-2d15.p1k chrm 573 646 52331 52403 F 74 90.54 1323 reject_low 3 ALIGNMENT 0 YS2-2d15.p1k chrm 829 629 2084 2083 C 201 0.00 1323 reject_low 21 ALIGNMENT 45 YS2-2d15.p1k chrm 80 28 2599 2650 C 53 96.23 1323 reject_low 21 ALIGNMENT 0 YS2-2d15.p1k chrm 829 623 11040 11039 C 207 0.00 1323 reject_low 15 ALIGNMENT 0 YS2-2d15.p1k chrm 62 572 71213 71212 F 511 0.00 1323 reject_low 18 ALIGNMENT 22 YS2-2d15.p1k chrm 814 873 50769 50832 F 60 80.00 1323 reject_low 7 ALIGNMENT 43 YS2-2d15.p1k chrm 622 548 34927 35006 C 75 88.00 1323 reject_low 10 ALIGNMENT 0 YS2-2d15.p1k chrm 62 536 2714 2713 F 475 0.00 1323 reject_low 19 ALIGNMENT 0 YS2-2d15.p1k chrm 62 565 76 75 F 504 0.00 1323 reject_low 20 ALIGNMENT 0 YS2-2d15.p1k chrm 644 829 12336 12335 F 186 0.00 1323 reject_low 4 ALIGNMENT 0 YS2-2d15.p1k chrm 623 829 9539 9538 F 207 0.00 1323 reject_low 14 ALIGNMENT 24 YS2-2d15.p1k chrm 814 851 50488 50526 F 38 92.11 1323 reject_low 9 ALIGNMENT 32 YS2-2d16.q1k chr14 50 7 772702 772745 C 44 90.91 1147 reject_low 1 ALIGNMENT 1064 YS2-2d16.p1k chr05 1295 29 23671 24946 C 1267 95.11 1319 accept 0 ALIGNMENT 0 YS2-2d16.q1k chr14 382 51 772336 772701 C 332 0.00 1147 reject_low 1 ALIGNMENT 576 YS2-2d16.q1k chr05 7 764 23143 23897 F 758 93.54 1147 accept 0 ALIGNMENT 22 YS2-2d16.q1k chr14 417 383 772301 772335 C 35 91.43 1147 reject_low 1 ALIGNMENT 0 YS2-2d17.p1k vc_2 790 62 2106 2105 C 729 0.00 1308 reject_low 2 ALIGNMENT 0 YS2-2d17.p1k vc_2 792 852 2164 2163 F 61 0.00 1308 reject_low 11 ALIGNMENT 0 YS2-2d17.p1k vc_3 792 852 2531 2530 F 61 0.00 1308 reject_low 12 ALIGNMENT 20 YS2-2d17.p1k vc_4 791 772 5812 5831 C 20 100.00 1308 reject_low 13 ALIGNMENT 0 YS2-2d17.p1k vc_2 62 771 2145 2144 F 710 0.00 1308 reject_low 11 ALIGNMENT 0 YS2-2d17.p1k vc_4 771 62 5832 5831 C 710 0.00 1308 reject_low 13 ALIGNMENT 0 YS2-2d17.p1k vc_4 852 792 5813 5812 C 61 0.00 1308 reject_low 13 ALIGNMENT 22 YS2-2d17.p1k vc_5 770 791 2377 2398 F 22 100.00 1308 reject_low 9 ALIGNMENT 279 YS2-2d17.p1k vc_4 791 1145 5871 6226 F 355 93.24 1308 reject_low 7 ALIGNMENT 324 YS2-2d17.p1k vc_7 791 1276 100 599 F 486 89.92 1308 reject_low 5 ALIGNMENT 324 YS2-2d17.p1k vc_1 1276 791 1606 2105 C 486 89.92 1308 reject_low 1 ALIGNMENT 26 YS2-2d17.p1k vc_1 821 791 2441 2472 C 31 96.77 1308 reject_low 15 ALIGNMENT 0 YS2-2d17.p1k vc_5 62 769 2377 2376 F 708 0.00 1308 reject_low 9 ALIGNMENT 0 YS2-2d17.p1k chr16 773 852 271702 271701 F 80 0.00 1308 accept 0 ALIGNMENT 145 YS2-2d17.p1k vc_6 1019 1276 3585 3855 F 258 86.82 1308 reject_low 8 ALIGNMENT 0 YS2-2d17.p1k vc_3 62 771 2512 2511 F 710 0.00 1308 reject_low 12 ALIGNMENT 20 YS2-2d17.p1k vc_7 791 772 2727 2746 C 20 100.00 1308 reject_low 14 ALIGNMENT 20 YS2-2d17.p1k vc_1 772 791 2512 2531 F 20 100.00 1308 reject_low 10 ALIGNMENT 324 YS2-2d17.p1k vc_2 1276 791 1606 2105 C 486 89.92 1308 reject_low 2 ALIGNMENT 20 YS2-2d17.p1k vc_2 772 791 2145 2164 F 20 100.00 1308 reject_low 11 ALIGNMENT 20 YS2-2d17.p1k vc_3 772 791 2512 2531 F 20 100.00 1308 reject_low 12 ALIGNMENT 0 YS2-2d17.p1k vc_7 771 62 2747 2746 C 710 0.00 1308 reject_low 14 ALIGNMENT 0 YS2-2d17.p1k vc_4 62 790 5871 5870 F 729 0.00 1308 reject_low 7 ALIGNMENT 0 YS2-2d17.p1k vc_7 852 792 2728 2727 C 61 0.00 1308 reject_low 14 ALIGNMENT 324 YS2-2d17.p1k vc_5 1276 791 4526 5025 C 486 89.92 1308 reject_low 4 ALIGNMENT 0 YS2-2d17.p1k vc_7 62 790 13562 13561 F 729 0.00 1308 reject_low 6 ALIGNMENT 0 YS2-2d17.p1k vc_6 62 1018 3585 3584 F 957 0.00 1308 reject_low 8 ALIGNMENT 0 YS2-2d17.p1k vc_1 792 852 2531 2530 F 61 0.00 1308 reject_low 10 ALIGNMENT 0 YS2-2d17.p1k vc_3 790 62 2473 2472 C 729 0.00 1308 reject_low 16 ALIGNMENT 0 YS2-2d17.p1k vc_5 792 852 2398 2397 F 61 0.00 1308 reject_low 9 ALIGNMENT 0 YS2-2d17.p1k vc_3 852 822 2442 2441 C 31 0.00 1308 reject_low 16 ALIGNMENT 515 YS2-2d17.q1k chr16 800 124 270997 271660 C 677 94.24 1449 accept 0 ALIGNMENT 689 YS2-2d17.p1k chr16 36 772 270967 271702 F 737 98.91 1308 accept 0 ALIGNMENT 26 YS2-2d17.p1k vc_3 821 791 2441 2472 C 31 96.77 1308 reject_low 16 ALIGNMENT 0 YS2-2d17.p1k vc_1 790 62 2106 2105 C 729 0.00 1308 reject_low 1 ALIGNMENT 0 YS2-2d17.p1k vc_1 852 822 2442 2441 C 31 0.00 1308 reject_low 15 ALIGNMENT 324 YS2-2d17.p1k vc_3 1276 791 1606 2105 C 486 89.92 1308 reject_low 3 ALIGNMENT 0 YS2-2d17.p1k vc_3 790 62 2106 2105 C 729 0.00 1308 reject_low 3 ALIGNMENT 0 YS2-2d17.p1k vc_1 790 62 2473 2472 C 729 0.00 1308 reject_low 15 ALIGNMENT 0 YS2-2d17.p1k vc_1 62 771 2512 2511 F 710 0.00 1308 reject_low 10 ALIGNMENT 0 YS2-2d17.p1k vc_5 790 62 5026 5025 C 729 0.00 1308 reject_low 4 ALIGNMENT 0 YS2-2d17.p1k vc_7 62 790 100 99 F 729 0.00 1308 reject_low 5 ALIGNMENT 324 YS2-2d17.p1k vc_7 791 1276 13562 14061 F 486 89.92 1308 reject_low 6 ALIGNMENT 613 YS2-2d18.q1k chr12 6 811 46068 46875 F 806 93.67 1148 accept 0 ALIGNMENT 1039 YS2-2d18.p1k chr12 1236 28 48603 49821 C 1209 95.95 1304 accept 0 ALIGNMENT 0 YS2-2d21.q1k vc_4 62 252 1561 1560 F 191 0.00 736 reject_vc 9 ALIGNMENT 148 YS2-2d21.q1k vc_7 309 53 4922 5172 C 257 87.94 736|0,1 reject_vc 7 ALIGNMENT 205 YS2-2d21.q1k vc_4 385 1 5282 5654 C 385 87.27 736 reject_vc 3 ALIGNMENT 260 YS2-2d21.p1k chr15 317 31 408492 408780 C 287 98.26 336 accept 0 ALIGNMENT 212 YS2-2d21.q1k vc_7 385 1 2199 2569 C 385 87.79 736 reject_vc 2 ALIGNMENT 203 YS2-2d21.q1k vc_1 1 309 2689 2991 F 309 90.29 736 reject_vc 4 ALIGNMENT 0 YS2-2d21.q1k vc_4 252 62 6327 6326 C 191 0.00 736 reject_vc 10 ALIGNMENT 22 YS2-2d21.q1k vc_4 310 253 6273 6326 C 58 84.48 736 reject_vc 10 ALIGNMENT 0 YS2-2d21.p1k chr15 336 318 408493 408492 C 19 0.00 336 accept 0 ALIGNMENT 51 YS2-2d21.q1k vc_7 54 3 6360 6411 C 52 100.00 736|1,0 reject_vc 7 ALIGNMENT 22 YS2-2d21.q1k vc_4 253 310 1561 1614 F 58 84.48 736 reject_vc 9 ALIGNMENT 212 YS2-2d21.q1k vc_5 1 385 2556 2926 F 385 87.79 736 reject_vc 1 ALIGNMENT 203 YS2-2d21.q1k vc_2 1 309 2322 2624 F 309 90.29 736 reject_vc 5 ALIGNMENT 203 YS2-2d21.q1k vc_3 1 309 2689 2991 F 309 90.29 736 reject_vc 6 ALIGNMENT 22 YS2-2d21.q1k vc_4 310 253 46 99 C 58 84.48 736 reject_vc 8 ALIGNMENT 0 YS2-2d21.q1k vc_7 53 54 5172 6360 C 0 0.00 736 reject_vc 7 ALIGNMENT 0 YS2-2d21.q1k vc_4 252 62 100 99 C 191 0.00 736 reject_vc 8 ALIGNMENT 0 YS2-2d22.p1k chr07 353 336 604248 604247 C 18 0.00 353 accept 0 ALIGNMENT 292 YS2-2d22.p1k chr07 335 29 604247 604555 C 307 99.35 353 accept 0 ALIGNMENT 0 YS2-2d23.p1k chr04 728 742 564333 564332 F 15 0.00 742 accept 0 ALIGNMENT 675 YS2-2d23.p1k chr04 33 727 563639 564333 F 695 99.86 742 accept 0 ALIGNMENT 645 YS2-2d24.q1k chr02 858 27 372943 373755 C 832 94.35 1270 accept 0 ALIGNMENT 949 YS2-2d24.p1k chr02 28 1148 369305 370421 F 1121 96.52 1220 accept 0 ALIGNMENT 1013 YS2-2e01.p1k chr14 1163 28 685005 686153 C 1136 97.18 1274 accept 0 ALIGNMENT 1042 YS2-2e02.p1k chr03 1237 33 286133 287348 C 1205 97.43 1293 accept 0 ALIGNMENT 611 YS2-2e02.q1k chr03 52 806 282845 283600 F 755 94.97 1362 accept 0 ALIGNMENT 0 YS2-2e03.p1k chr12 450 432 400694 400693 C 19 0.00 450 accept 0 ALIGNMENT 385 YS2-2e03.p1k chr12 431 30 400693 401095 C 402 99.25 450 accept 0 ALIGNMENT 0 YS2-2e05.q1k chr12 122 376 489348 489347 F 255 0.00 1336 reject_low 3 ALIGNMENT 380 YS2-2e05.q1k chr12 48 495 468487 468930 F 448 96.43 1336 reject_low 2 ALIGNMENT 0 YS2-2e05.q1k chr12 122 376 472464 472463 F 255 0.00 1336 reject_low 4 ALIGNMENT 107 YS2-2e05.q1k chr12 377 495 485696 485814 F 119 96.64 1336 reject_low 6 ALIGNMENT 1049 YS2-2e05.p1k chr12 1198 35 453556 454731 C 1164 97.16 1306 reject_low 1 ALIGNMENT 107 YS2-2e05.q1k chr12 377 495 472464 472582 F 119 96.64 1336 reject_low 4 ALIGNMENT 448 YS2-2e05.q1k chr12 48 710 459350 460015 F 663 91.10 1336 accept 0 ALIGNMENT 0 YS2-2e05.q1k chr12 122 376 482044 482043 F 255 0.00 1336 reject_low 5 ALIGNMENT 114 YS2-2e05.q1k chr12 377 505 489348 489476 F 129 96.12 1336 reject_low 3 ALIGNMENT 0 YS2-2e05.q1k chr12 122 376 485696 485695 F 255 0.00 1336 reject_low 6 ALIGNMENT 107 YS2-2e05.q1k chr12 377 495 482044 482162 F 119 96.64 1336 reject_low 5 ALIGNMENT 1049 YS2-2e05.p1k chr12 1198 35 462693 463868 C 1164 97.16 1306 accept 0 ALIGNMENT 263 YS2-2e06.q1k vc_3 254 710 2531 2981 F 457 87.31 1414 reject_vc 3 ALIGNMENT 35 YS2-2e06.q1k vc_4 217 254 5834 5871 F 38 97.37 1414 reject_vc 9 ALIGNMENT 0 YS2-2e06.q1k vc_2 345 255 2106 2105 C 91 0.00 1414 reject_vc 12 ALIGNMENT 0 YS2-2e06.q1k vc_3 345 255 2473 2472 C 91 0.00 1414 reject_vc 13 ALIGNMENT 258 YS2-2e06.q1k vc_4 710 254 5360 5812 C 457 86.43 1414 reject_vc 6 ALIGNMENT 0 YS2-2e06.q1k vc_1 345 255 2473 2472 C 91 0.00 1414 reject_vc 11 ALIGNMENT 35 YS2-2e06.q1k vc_2 254 217 2105 2142 C 38 97.37 1414 reject_vc 12 ALIGNMENT 35 YS2-2e06.q1k vc_5 254 217 5025 5062 C 38 97.37 1414 reject_vc 14 ALIGNMENT 0 YS2-2e06.q1k vc_4 255 254 5872 6353 F 0 0.00 1414 reject_vc 9 ALIGNMENT 0 YS2-2e06.q1k vc_7 255 345 13562 13561 F 91 0.00 1414 reject_vc 15 ALIGNMENT 263 YS2-2e06.q1k vc_2 254 710 2164 2614 F 457 87.31 1414 reject_vc 2 ALIGNMENT 146 YS2-2e06.q1k vc_4 254 415 126 287 F 162 96.91 1414 reject_vc 8 ALIGNMENT 35 YS2-2e06.q1k vc_1 254 217 2472 2509 C 38 97.37 1414 reject_vc 11 ALIGNMENT 0 YS2-2e06.p1k chr11 186 203 417432 417431 F 18 0.00 203 accept_chi 0 ALIGNMENT 149 YS2-2e06.p1k chr11 29 185 417276 417432 F 157 99.36 203 accept_chi 0 ALIGNMENT 0 YS2-2e06.q1k vc_5 345 255 5026 5025 C 91 0.00 1414 reject_vc 14 ALIGNMENT 263 YS2-2e06.q1k vc_1 254 710 2531 2981 F 457 87.31 1414 reject_vc 1 ALIGNMENT 0 YS2-2e06.q1k chr11 345 214 417277 417276 C 132 0.00 1414 accept_chi 7 ALIGNMENT 32 YS2-2e06.q1k vc_5 251 217 1 35 C 35 97.14 1414 reject_vc 16 ALIGNMENT 85 YS2-2e06.q1k chr11 213 57 417276 417425 C 157 89.17 1414 accept_chi 7 ALIGNMENT 0 YS2-2e06.q1k vc_5 345 252 2 1 C 94 0.00 1414 reject_vc 16 ALIGNMENT 35 YS2-2e06.q1k vc_3 254 217 2472 2509 C 38 97.37 1414 reject_vc 13 ALIGNMENT 82 YS2-2e06.q1k vc_4 342 254 1446 1534 C 89 97.75 1414 reject_vc 10 ALIGNMENT 263 YS2-2e06.q1k vc_5 254 710 2398 2848 F 457 87.31 1414 reject_vc 4 ALIGNMENT 35 YS2-2e06.q1k vc_7 217 254 13525 13562 F 38 97.37 1414 reject_vc 15 ALIGNMENT 263 YS2-2e06.q1k vc_7 710 254 2277 2727 C 457 86.87 1414 reject_vc 5 ALIGNMENT 146 YS2-2e06.q1k vc_4 254 415 6353 6514 F 162 96.91 1414|1,0 reject_vc 9 ALIGNMENT 1023 YS2-2e07.p1k chr15 1183 30 800532 801692 C 1154 97.40 1324 accept 0 ALIGNMENT 418 YS2-2e07.q1k chr15 54 661 800342 800946 F 608 91.45 1419 accept 0 ALIGNMENT 601 YS2-2e08.q1k chr12 40 815 236897 237664 F 776 94.07 1375 accept 0 ALIGNMENT 1004 YS2-2e08.p1k chr12 1171 37 239107 240255 C 1135 96.92 1326 accept 0 ALIGNMENT 0 YS2-2e11.p1k chr01 509 491 122826 122825 C 19 0.00 509 accept_chi 0 ALIGNMENT 451 YS2-2e11.p1k chr01 490 29 122825 123286 C 462 100.00 509 accept_chi 0 ALIGNMENT 351 YS2-2e11.q1k chr01 109 535 122869 123291 F 427 95.55 1361 accept_chi 1 ALIGNMENT 34 YS2-2e13.q1k vc_2 401 362 2106 2145 C 40 95.00 1302 reject_low 16 ALIGNMENT 399 YS2-2e13.p1k vc_1 554 1 1203 1749 C 554 91.88 605 reject_low 4 ALIGNMENT 0 YS2-2e13.q1k vc_7 402 262 2727 2726 C 141 0.00 1302 reject_low 2 ALIGNMENT 393 YS2-2e13.p1k vc_7 1 554 13918 14464 F 554 91.52 605 reject_low 7 ALIGNMENT 0 YS2-2e13.q1k vc_7 262 364 13525 13524 F 103 0.00 1302 reject_low 19 ALIGNMENT 32 YS2-2e13.q1k vc_5 401 364 5026 5063 C 38 94.74 1302 reject_low 18 ALIGNMENT 0 YS2-2e13.q1k vc_1 262 402 2532 2531 F 141 0.00 1302 reject_low 8 ALIGNMENT 138 YS2-2e13.q1k vc_7 648 403 2484 2726 C 246 86.59 1302 reject_low 2 ALIGNMENT 34 YS2-2e13.q1k vc_4 362 401 5831 5870 F 40 95.00 1302 reject_low 13 ALIGNMENT 399 YS2-2e13.p1k vc_3 554 1 1203 1749 C 554 91.88 605 reject_low 6 ALIGNMENT 30 YS2-2e13.q1k vc_5 399 364 1 36 C 36 94.44 1302 reject_low 20 ALIGNMENT 0 YS2-2e13.q1k vc_5 363 262 5064 5063 C 102 0.00 1302 reject_low 18 ALIGNMENT 402 YS2-2e13.p1k vc_6 1 554 3712 4258 F 554 92.06 605 reject_low 3 ALIGNMENT 138 YS2-2e13.q1k vc_1 403 648 2532 2774 F 246 86.59 1302 reject_low 8 ALIGNMENT 0 YS2-2e13.q1k vc_4 262 402 127 126 F 141 0.00 1302 reject_low 12 ALIGNMENT 131 YS2-2e13.q1k vc_4 648 403 5567 5811 C 246 85.77 1302 reject_low 11 ALIGNMENT 399 YS2-2e13.p1k vc_2 554 1 1203 1749 C 554 91.88 605 reject_low 5 ALIGNMENT 402 YS2-2e13.p1k vc_5 554 1 4123 4669 C 554 92.06 605 reject_low 1 ALIGNMENT 138 YS2-2e13.q1k vc_2 403 648 2165 2407 F 246 86.59 1302 reject_low 9 ALIGNMENT 113 YS2-2e13.q1k vc_4 403 559 6354 6509 F 157 91.08 1302 reject_low 13 ALIGNMENT 34 YS2-2e13.q1k vc_1 401 362 2473 2512 C 40 95.00 1302 reject_low 15 ALIGNMENT 31 YS2-2e13.q1k vc_7 365 401 13525 13561 F 37 94.59 1302 reject_low 19 ALIGNMENT 0 YS2-2e13.q1k vc_1 361 262 2513 2512 C 100 0.00 1302 reject_low 15 ALIGNMENT 0 YS2-2e13.q1k vc_5 363 262 37 36 C 102 0.00 1302 reject_low 20 ALIGNMENT 138 YS2-2e13.q1k vc_5 403 648 2399 2641 F 246 86.59 1302 reject_low 1 ALIGNMENT 0 YS2-2e13.q1k vc_5 262 402 2399 2398 F 141 0.00 1302 reject_low 1 ALIGNMENT 0 YS2-2e13.q1k vc_3 361 262 2513 2512 C 100 0.00 1302 reject_low 17 ALIGNMENT 0 YS2-2e13.q1k vc_4 402 262 5812 5811 C 141 0.00 1302 reject_low 11 ALIGNMENT 0 YS2-2e13.q1k vc_4 262 361 5831 5830 F 100 0.00 1302 reject_low 13 ALIGNMENT 0 YS2-2e13.q1k vc_4 402 402 5871 6353 F 1 0.00 1302 reject_low 13 ALIGNMENT 0 YS2-2e13.q1k vc_2 361 262 2146 2145 C 100 0.00 1302 reject_low 16 ALIGNMENT 393 YS2-2e13.p1k vc_7 1 554 456 1002 F 554 91.52 605 reject_low 2 ALIGNMENT 0 YS2-2e13.q1k vc_4 402 262 1534 1533 C 141 0.00 1302 reject_low 14 ALIGNMENT 138 YS2-2e13.q1k vc_3 403 648 2532 2774 F 246 86.59 1302 reject_low 10 ALIGNMENT 34 YS2-2e13.q1k vc_3 401 362 2473 2512 C 40 95.00 1302 reject_low 17 ALIGNMENT 0 YS2-2e13.q1k vc_3 262 402 2532 2531 F 141 0.00 1302 reject_low 10 ALIGNMENT 72 YS2-2e13.q1k vc_4 490 403 1446 1533 C 88 94.32 1302 reject_low 14 ALIGNMENT 224 YS2-2e13.q1k chr07 61 362 945353 945650 F 302 92.72 1302 accept 0 ALIGNMENT 113 YS2-2e13.q1k vc_4 403 559 127 282 F 157 91.08 1302 reject_low 12 ALIGNMENT 0 YS2-2e13.q1k vc_2 262 402 2165 2164 F 141 0.00 1302 reject_low 9 ALIGNMENT 0 YS2-2e14.p1k chr04 494 476 402133 402132 C 19 0.00 494 accept 0 ALIGNMENT 415 YS2-2e14.p1k chr04 475 33 402132 402574 C 443 99.55 494 accept 0 ALIGNMENT 707 YS2-2e15.q1k chr12 860 26 559250 560072 C 835 96.05 1346 accept 0 ALIGNMENT 823 YS2-2e15.p1k chr12 32 1115 554920 556035 F 1084 92.90 1306 accept 0 ALIGNMENT 0 YS2-2e16.p1k chr13 435 452 702972 702971 F 18 0.00 452 accept 0 ALIGNMENT 387 YS2-2e16.p1k chr13 36 434 702574 702972 F 399 100.00 452 accept 0 ALIGNMENT 0 YS2-2e18.q1k vc_7 301 302 4702 4922 C 0 0.00 932 reject_low 6 ALIGNMENT 205 YS2-2e18.q1k vc_7 301 53 4923 5172 C 249 94.78 932 reject_low 6 ALIGNMENT 254 YS2-2e18.q1k vc_3 1 301 2689 2990 F 301 95.35 932 reject_low 5 ALIGNMENT 43 YS2-2e18.q1k vc_7 420 301 4587 4702 C 120 81.67 932|0,1 reject_low 6 ALIGNMENT 291 YS2-2e18.q1k vc_7 495 1 2080 2569 C 495 87.68 932 reject_vc 1 ALIGNMENT 291 YS2-2e18.q1k vc_5 1 495 2556 3045 F 495 87.68 932 reject_vc 0 ALIGNMENT 285 YS2-2e18.q1k vc_4 420 1 5236 5654 C 420 90.48 932 reject_low 2 ALIGNMENT 254 YS2-2e18.q1k vc_2 1 301 2322 2623 F 301 95.35 932 reject_low 4 ALIGNMENT 38 YS2-2e18.q1k vc_4 310 495 1882 2061 F 186 76.88 932 reject_low 7 ALIGNMENT 0 YS2-2e18.q1k vc_4 62 309 1882 1881 F 248 0.00 932 reject_low 7 ALIGNMENT 254 YS2-2e18.q1k vc_1 1 301 2689 2990 F 301 95.35 932 reject_low 3 ALIGNMENT 0 YS2-2e19.p1k chrm 872 517 84487 84486 C 356 0.00 1305 reject_low 6 ALIGNMENT 97 YS2-2e19.p1k chrm 47 229 56747 56933 F 183 87.98 1305 reject_low 4 ALIGNMENT 45 YS2-2e19.p1k chrm 516 469 84486 84533 C 48 100.00 1305 reject_low 6 ALIGNMENT 33 YS2-2e19.p1k chrm 448 499 57005 57056 F 52 90.38 1305 reject_low 4 ALIGNMENT 0 YS2-2e19.p1k chrm 468 62 84534 84533 C 407 0.00 1305 reject_low 6 ALIGNMENT 0 YS2-2e19.p1k chrm 872 540 76573 76572 C 333 0.00 1305 reject_low 9 ALIGNMENT 0 YS2-2e19.p1k chrm 468 136 76641 82324 C 333 0.00 1305 reject_low 9 ALIGNMENT 40 YS2-2e19.p1k chrm 537 473 3036 3101 C 65 89.23 1305 reject_low 5 ALIGNMENT 0 YS2-2e19.p1k chrm 488 62 2121 2120 C 427 0.00 1305 reject_low 8 ALIGNMENT 0 YS2-2e19.p1k chrm 872 802 29553 29552 C 71 0.00 1305 accept 0 ALIGNMENT 65 YS2-2e19.p1k chrm 135 42 82325 82419 C 94 93.62 1305 reject_low 9 ALIGNMENT 112 YS2-2e19.p1k chrm 197 34 44860 45024 C 164 92.07 1305 reject_low 2 ALIGNMENT 0 YS2-2e19.p1k chrm 532 872 71271 71270 F 341 0.00 1305 reject_low 3 ALIGNMENT 96 YS2-2e19.p1k chrm 42 196 12691 12844 F 155 89.68 1305 reject_low 1 ALIGNMENT 568 YS2-2e19.p1k chrm 801 38 29552 30313 C 764 98.56 1305 accept 0 ALIGNMENT 0 YS2-2e19.p1k chrm 500 872 57056 57055 F 373 0.00 1305 reject_low 4 ALIGNMENT 27 YS2-2e19.p1k chrm 517 489 2092 2120 C 29 100.00 1305 reject_low 8 ALIGNMENT 0 YS2-2e19.p1k chrm 872 538 3037 3036 C 335 0.00 1305 reject_low 5 ALIGNMENT 39 YS2-2e19.p1k chrm 598 469 34857 34980 C 130 82.31 1305 reject_low 2 ALIGNMENT 0 YS2-2e19.p1k chrm 230 447 56934 57004 F 218 0.00 1305 reject_low 4 ALIGNMENT 107 YS2-2e19.p1k chrm 42 196 4223 4376 F 155 92.26 1305 reject_low 7 ALIGNMENT 0 YS2-2e19.p1k chrm 872 518 2093 2092 C 355 0.00 1305 reject_low 8 ALIGNMENT 0 YS2-2e19.p1k chrm 62 409 71157 71156 F 348 0.00 1305 reject_low 3 ALIGNMENT 0 YS2-2e19.p1k chrm 197 872 12844 12843 F 676 0.00 1305 reject_low 1 ALIGNMENT 0 YS2-2e19.p1k chrm 197 468 4377 12264 F 272 0.00 1305 reject_low 7 ALIGNMENT 41 YS2-2e19.p1k chrm 410 531 71157 71271 F 122 82.79 1305 reject_low 3 ALIGNMENT 52 YS2-2e19.p1k chrm 539 469 76572 76640 C 71 92.96 1305 reject_low 9 ALIGNMENT 0 YS2-2e19.p1k chrm 468 198 34981 44859 C 271 0.00 1305 reject_low 2 ALIGNMENT 0 YS2-2e19.p1k chrm 472 62 3102 3101 C 411 0.00 1305 reject_low 5 ALIGNMENT 45 YS2-2e19.p1k chrm 469 516 12265 12312 F 48 100.00 1305 reject_low 7 ALIGNMENT 0 YS2-2e19.p1k chrm 517 872 12312 12311 F 356 0.00 1305 reject_low 7 ALIGNMENT 0 YS2-2e19.p1k chrm 872 599 34858 34857 C 274 0.00 1305 reject_low 2 ALIGNMENT 949 YS2-2e20.p1k chr07 30 1199 1059256 1060439 F 1170 94.02 1289 accept 0 ALIGNMENT 641 YS2-2e20.q1k chr07 909 1 1062686 1063583 C 909 92.08 1219 accept 0 ALIGNMENT 1031 YS2-2e21.p1k chr11 1242 33 449733 450945 C 1210 95.70 1255 accept 0 ALIGNMENT 558 YS2-2e21.q1k chr11 53 760 446810 447511 F 708 94.92 1319 accept 0 ALIGNMENT 1046 YS2-2e23.p1k chr05 1226 39 103282 104472 C 1188 96.89 1237 accept 0 ALIGNMENT 353 YS2-2e23.q1k chr05 68 646 102894 103467 F 579 88.60 1217 accept 0 ALIGNMENT 735 YS2-2e24.p1k chr11 1034 34 489161 490159 C 1001 94.31 1313 accept 0 ALIGNMENT 589 YS2-2e24.q1k chr11 12 768 487596 488342 F 757 93.92 1150 accept 0 ALIGNMENT 297 YS2-2f01.q1k chr12 34 480 827269 827718 F 447 89.93 1346 accept 0 ALIGNMENT 1037 YS2-2f01.p1k chr12 1248 34 827498 828694 C 1215 96.21 1326 accept 0 ALIGNMENT 517 YS2-2f02.q1k chr04 709 53 1257150 1257801 C 657 94.22 1325 accept 0 ALIGNMENT 0 YS2-2f02.p1k chr15 797 845 594425 594424 F 49 0.00 1314 reject_low 1 ALIGNMENT 1080 YS2-2f02.p1k chr04 34 1299 1256308 1257580 F 1266 95.42 1314 accept 0 ALIGNMENT 0 YS2-2f02.p1k chr15 62 712 594341 594340 F 651 0.00 1314 reject_low 1 ALIGNMENT 55 YS2-2f02.p1k chr15 713 796 594341 594425 F 84 89.29 1314 reject_low 1 ALIGNMENT 100 YS2-2f03.q1k vc_4 309 612 1879 2172 F 304 80.59 975 reject_low 7 ALIGNMENT 271 YS2-2f03.q1k vc_2 1 296 2322 2617 F 296 97.30 975 reject_low 4 ALIGNMENT 0 YS2-2f03.q1k vc_7 305 297 4700 4928 C 9 0.00 975 reject_low 6 ALIGNMENT 44 YS2-2f03.q1k vc_4 305 238 6273 6339 C 68 89.71 975 reject_low 9 ALIGNMENT 271 YS2-2f03.q1k vc_3 1 296 2689 2984 F 296 97.30 975 reject_low 5 ALIGNMENT 0 YS2-2f03.q1k vc_4 237 62 6340 6339 C 176 0.00 975 reject_low 9 ALIGNMENT 48 YS2-2f03.q1k vc_7 54 3 6360 6411 C 52 98.08 975|1,0 reject_low 6 ALIGNMENT 219 YS2-2f03.q1k vc_7 296 53 4929 5172 C 244 96.72 975|0,1 reject_low 6 ALIGNMENT 44 YS2-2f03.q1k vc_4 238 305 1548 1614 F 68 89.71 975 reject_low 7 ALIGNMENT 334 YS2-2f03.q1k vc_4 426 1 5232 5654 C 426 93.66 975 reject_low 2 ALIGNMENT 379 YS2-2f03.q1k vc_5 1 612 2556 3156 F 612 88.73 975 reject_vc 0 ALIGNMENT 0 YS2-2f03.q1k vc_4 306 308 1615 1878 F 3 0.00 975 reject_low 7 ALIGNMENT 373 YS2-2f03.q1k vc_7 502 1 2077 2569 C 502 92.63 975 reject_low 1 ALIGNMENT 66 YS2-2f03.q1k vc_7 426 306 4583 4699 C 121 87.60 975 reject_low 6 ALIGNMENT 0 YS2-2f03.q1k vc_4 237 62 113 112 C 176 0.00 975 reject_low 8 ALIGNMENT 271 YS2-2f03.q1k vc_1 1 296 2689 2984 F 296 97.30 975 reject_low 3 ALIGNMENT 0 YS2-2f03.q1k vc_4 62 237 1548 1547 F 176 0.00 975 reject_low 7 ALIGNMENT 0 YS2-2f03.q1k vc_7 53 54 5172 6360 C 0 0.00 975 reject_low 6 ALIGNMENT 44 YS2-2f03.q1k vc_4 305 238 46 112 C 68 89.71 975 reject_low 8 ALIGNMENT 879 YS2-2f04.p1k chrm 1088 30 7143 8204 C 1059 98.49 1315 accept 0 ALIGNMENT 0 YS2-2f04.p1k chrm 413 62 7821 7820 C 352 0.00 1315 reject_low 1 ALIGNMENT 67 YS2-2f04.p1k vc_1 1299 1122 1910 2090 C 178 80.34 1315 reject_low 2 ALIGNMENT 555 YS2-2f04.p1k chrm 1085 414 7146 7820 C 672 97.62 1315 reject_low 1 ALIGNMENT 0 YS2-2f04.p1k vc_1 1121 62 2091 2090 C 1060 0.00 1315 reject_low 2 ALIGNMENT 103 YS2-2f06.p1k chr04 651 29 634283 634905 C 623 72.87 1302 reject_low 1 ALIGNMENT 777 YS2-2f06.q1k chr05 32 923 511861 512746 F 892 97.53 1356 accept 0 ALIGNMENT 0 YS2-2f06.p1k chr04 911 652 634284 634283 C 260 0.00 1302 reject_low 1 ALIGNMENT 970 YS2-2f06.p1k chr05 1146 29 515106 516238 C 1118 96.87 1302 accept 0 ALIGNMENT 928 YS2-2f07.p1k chr08 1118 34 417031 418123 C 1085 96.13 1290 accept 0 ALIGNMENT 727 YS2-2f07.q1k chr08 25 951 413776 414698 F 927 94.71 1300 accept 0 ALIGNMENT 822 YS2-2f08.q1k chr10 1065 30 312216 313251 C 1036 93.92 1292 accept 0 ALIGNMENT 921 YS2-2f08.p1k chr10 33 1116 308133 309240 F 1084 96.49 1312 accept 0 ALIGNMENT 51 YS2-2f10.p1k chr13 627 474 146727 146879 C 154 79.22 1291 accept_chi 1 ALIGNMENT 587 YS2-2f10.q1k chr01 4 749 197869 198609 F 746 94.24 1352 accept_chi 0 ALIGNMENT 0 YS2-2f10.p1k chr13 893 628 146728 146727 C 266 0.00 1291 accept_chi 1 ALIGNMENT 0 YS2-2f10.p1k chr13 473 62 146880 146879 C 412 0.00 1291 accept_chi 1 ALIGNMENT 279 YS2-2f11.q1k vc_7 765 331 2295 2726 C 435 89.20 1330 reject_low 6 ALIGNMENT 0 YS2-2f11.q1k vc_3 122 330 2532 2531 F 209 0.00 1330 reject_low 4 ALIGNMENT 0 YS2-2f11.q1k vc_4 122 330 127 126 F 209 0.00 1330 reject_low 8 ALIGNMENT 0 YS2-2f11.q1k vc_1 289 122 2513 2512 C 168 0.00 1330 reject_low 11 ALIGNMENT 0 YS2-2f11.q1k vc_5 405 330 5027 5026 C 76 0.00 1330 reject_low 14 ALIGNMENT 0 YS2-2f11.q1k vc_7 330 405 13561 13560 F 76 0.00 1330 reject_low 15 ALIGNMENT 279 YS2-2f11.q1k vc_3 331 765 2532 2963 F 435 89.20 1330 reject_low 4 ALIGNMENT 0 YS2-2f11.q1k vc_3 405 330 2474 2473 C 76 0.00 1330 reject_low 13 ALIGNMENT 272 YS2-2f11.q1k vc_4 765 331 5378 5811 C 435 88.74 1330 reject_low 7 ALIGNMENT 0 YS2-2f11.q1k vc_5 122 330 2399 2398 F 209 0.00 1330 reject_low 5 ALIGNMENT 37 YS2-2f11.q1k vc_7 293 329 13525 13561 F 37 100.00 1330 reject_low 15 ALIGNMENT 0 YS2-2f11.q1k vc_7 330 122 2727 2726 C 209 0.00 1330 reject_low 6 ALIGNMENT 0 YS2-2f11.q1k chr03 288 405 283474 283473 F 118 0.00 1330 accept_chi 1 ALIGNMENT 0 YS2-2f11.q1k vc_2 122 330 2165 2164 F 209 0.00 1330 reject_low 3 ALIGNMENT 0 YS2-2f11.q1k vc_1 122 330 2532 2531 F 209 0.00 1330 reject_low 2 ALIGNMENT 0 YS2-2f11.q1k vc_7 122 292 13525 13524 F 171 0.00 1330 reject_low 15 ALIGNMENT 0 YS2-2f11.q1k vc_5 291 122 5064 5063 C 170 0.00 1330 reject_low 14 ALIGNMENT 0 YS2-2f11.q1k vc_5 405 328 2 1 C 78 0.00 1330 reject_low 16 ALIGNMENT 0 YS2-2f11.q1k vc_3 289 122 2513 2512 C 168 0.00 1330 reject_low 13 ALIGNMENT 0 YS2-2f11.q1k vc_1 405 330 2474 2473 C 76 0.00 1330 reject_low 11 ALIGNMENT 0 YS2-2f11.q1k vc_5 291 122 37 36 C 170 0.00 1330 reject_low 16 ALIGNMENT 40 YS2-2f11.q1k vc_4 290 329 5831 5870 F 40 100.00 1330 reject_low 9 ALIGNMENT 0 YS2-2f11.q1k vc_4 330 122 1534 1533 C 209 0.00 1330 reject_low 10 ALIGNMENT 0 YS2-2f11.q1k vc_4 122 289 5831 5830 F 168 0.00 1330 reject_low 9 ALIGNMENT 241 YS2-2f11.p1k chr03 283 35 283227 283476 C 249 99.60 289 accept_chi 0 ALIGNMENT 0 YS2-2f11.q1k vc_2 289 122 2146 2145 C 168 0.00 1330 reject_low 12 ALIGNMENT 38 YS2-2f11.q1k vc_5 329 292 5026 5063 C 38 100.00 1330 reject_low 14 ALIGNMENT 40 YS2-2f11.q1k vc_1 329 290 2473 2512 C 40 100.00 1330 reject_low 11 ALIGNMENT 279 YS2-2f11.q1k vc_2 331 765 2165 2596 F 435 89.20 1330 reject_low 3 ALIGNMENT 153 YS2-2f11.q1k vc_4 331 491 127 287 F 161 98.76 1330 reject_low 8 ALIGNMENT 0 YS2-2f11.q1k vc_4 330 330 5871 6353 F 1 0.00 1330 reject_low 9 ALIGNMENT 0 YS2-2f11.q1k vc_2 405 330 2107 2106 C 76 0.00 1330 reject_low 12 ALIGNMENT 40 YS2-2f11.q1k vc_2 329 290 2106 2145 C 40 100.00 1330 reject_low 12 ALIGNMENT 279 YS2-2f11.q1k vc_1 331 765 2532 2963 F 435 89.20 1330 reject_low 2 ALIGNMENT 153 YS2-2f11.q1k vc_4 331 491 6354 6514 F 161 98.76 1330 reject_low 9 ALIGNMENT 87 YS2-2f11.q1k vc_4 418 331 1446 1533 C 88 100.00 1330 reject_low 10 ALIGNMENT 226 YS2-2f11.q1k chr03 46 287 283232 283474 F 242 98.35 1330 accept_chi 1 ALIGNMENT 0 YS2-2f11.q1k vc_4 330 122 5812 5811 C 209 0.00 1330 reject_low 7 ALIGNMENT 36 YS2-2f11.q1k vc_5 327 292 1 36 C 36 100.00 1330 reject_low 16 ALIGNMENT 40 YS2-2f11.q1k vc_3 329 290 2473 2512 C 40 100.00 1330 reject_low 13 ALIGNMENT 279 YS2-2f11.q1k vc_5 331 765 2399 2830 F 435 89.20 1330 reject_low 5 ALIGNMENT 0 YS2-2f12.q1k chr09 87 62 300309 300308 C 26 0.00 1281 reject_low 7 ALIGNMENT 87 YS2-2f12.q1k chr07 180 85 185710 185805 C 96 96.88 1281 reject_low 2 ALIGNMENT 87 YS2-2f12.q1k chr05 178 88 435740 435831 C 91 98.90 1281 reject_low 3 ALIGNMENT 78 YS2-2f12.q1k chr07 97 179 122272 122355 F 83 98.80 1281 reject_low 10 ALIGNMENT 0 YS2-2f12.q1k chr06 660 180 226667 226666 C 481 0.00 1281 reject_low 13 ALIGNMENT 807 YS2-2f12.q1k chr16 30 1040 581989 583000 F 1011 94.86 1281 accept 0 ALIGNMENT 75 YS2-2f12.q1k chr04 93 170 1201735 1201812 F 78 98.72 1281 reject_low 12 ALIGNMENT 0 YS2-2f12.q1k chr13 660 180 480613 480612 C 481 0.00 1281 reject_low 11 ALIGNMENT 0 YS2-2f12.q1k chr04 62 92 1201735 1201734 F 31 0.00 1281 reject_low 12 ALIGNMENT 0 YS2-2f12.q1k chr06 97 62 226748 226747 C 36 0.00 1281 reject_low 13 ALIGNMENT 0 YS2-2f12.q1k chr10 62 84 414868 414867 F 23 0.00 1281 reject_low 4 ALIGNMENT 0 YS2-2f12.q1k chr03 660 184 151269 151268 C 477 0.00 1281 reject_low 1 ALIGNMENT 0 YS2-2f12.q1k chr11 62 96 202644 202643 F 35 0.00 1281 reject_low 9 ALIGNMENT 0 YS2-2f12.q1k chr07 84 62 185806 185805 C 23 0.00 1281 reject_low 2 ALIGNMENT 77 YS2-2f12.q1k chr13 179 97 480612 480693 C 83 98.80 1281 reject_low 11 ALIGNMENT 87 YS2-2f12.q1k chr03 183 93 151268 151358 C 91 98.90 1281 reject_low 1 ALIGNMENT 81 YS2-2f12.q1k chr11 97 178 202644 202725 F 82 100.00 1281 reject_low 9 ALIGNMENT 82 YS2-2f12.q1k chr07 97 179 876398 876480 F 83 100.00 1281 reject_low 8 ALIGNMENT 0 YS2-2f12.q1k chr07 180 660 122355 122354 F 481 0.00 1281 reject_low 10 ALIGNMENT 85 YS2-2f12.q1k chr05 178 88 135417 135507 C 91 97.80 1281 reject_low 5 ALIGNMENT 0 YS2-2f12.q1k chr05 660 179 435741 435740 C 482 0.00 1281 reject_low 3 ALIGNMENT 69 YS2-2f12.q1k chr06 179 98 226666 226747 C 82 96.34 1281 reject_low 13 ALIGNMENT 0 YS2-2f12.q1k chr07 62 96 122272 122271 F 35 0.00 1281 reject_low 10 ALIGNMENT 0 YS2-2f12.q1k chr04 87 62 1352539 1352538 C 26 0.00 1281 reject_low 6 ALIGNMENT 0 YS2-2f12.q1k chr04 171 660 1201812 1201811 F 490 0.00 1281 reject_low 12 ALIGNMENT 0 YS2-2f12.q1k chr07 180 660 876480 876479 F 481 0.00 1281 reject_low 8 ALIGNMENT 0 YS2-2f12.q1k chr10 171 660 414953 414952 F 490 0.00 1281 reject_low 4 ALIGNMENT 0 YS2-2f12.q1k chr07 62 96 876398 876397 F 35 0.00 1281 reject_low 8 ALIGNMENT 0 YS2-2f12.q1k chr05 87 62 135508 135507 C 26 0.00 1281 reject_low 5 ALIGNMENT 0 YS2-2f12.q1k chr09 660 179 300220 300219 C 482 0.00 1281 reject_low 7 ALIGNMENT 77 YS2-2f12.q1k chr10 85 170 414868 414953 F 86 96.51 1281 reject_low 4 ALIGNMENT 0 YS2-2f12.q1k chr05 660 179 135418 135417 C 482 0.00 1281 reject_low 5 ALIGNMENT 0 YS2-2f12.q1k chr03 92 62 151359 151358 C 31 0.00 1281 reject_low 1 ALIGNMENT 0 YS2-2f12.q1k chr05 87 62 435832 435831 C 26 0.00 1281 reject_low 3 ALIGNMENT 0 YS2-2f12.q1k chr11 179 660 202725 202724 F 482 0.00 1281 reject_low 9 ALIGNMENT 83 YS2-2f12.q1k chr04 179 88 1352447 1352538 C 92 96.74 1281 reject_low 6 ALIGNMENT 861 YS2-2f12.p1k chr16 1127 29 585522 586646 C 1099 93.90 1245 accept 0 ALIGNMENT 0 YS2-2f12.q1k chr13 96 62 480694 480693 C 35 0.00 1281 reject_low 11 ALIGNMENT 0 YS2-2f12.q1k chr07 660 181 185711 185710 C 480 0.00 1281 reject_low 2 ALIGNMENT 0 YS2-2f12.q1k chr04 660 180 1352448 1352447 C 481 0.00 1281 reject_low 6 ALIGNMENT 77 YS2-2f12.q1k chr09 178 88 300219 300308 C 91 95.60 1281 reject_low 7 ALIGNMENT 915 YS2-2f13.p1k chr09 1122 28 285152 286256 C 1095 95.53 1268 accept 0 ALIGNMENT 804 YS2-2f13.q1k chr09 32 1037 282122 283120 F 1006 94.93 1290 accept 0 ALIGNMENT 686 YS2-2f14.q1k chr11 8 830 332761 333568 F 823 96.60 1241 accept 0 ALIGNMENT 957 YS2-2f14.p1k chr11 1119 27 334050 335158 C 1093 96.80 1252 accept 0 ALIGNMENT 854 YS2-2f16.p1k chr06 29 1035 24816 25833 F 1007 96.13 1186 accept 0 ALIGNMENT 69 YS2-2f16.q1k chr02 812 480 801411 801737 C 333 75.08 1341 reject_low 1 ALIGNMENT 0 YS2-2f16.q1k chr02 479 62 801738 801737 C 418 0.00 1341 reject_low 1 ALIGNMENT 804 YS2-2f16.q1k chr06 959 32 28974 29891 C 928 96.88 1341 accept 0 ALIGNMENT 919 YS2-2f17.p1k chr03 37 1062 253133 254164 F 1026 96.78 1304 accept 0 ALIGNMENT 772 YS2-2f17.q1k chr03 950 29 253248 254164 C 922 95.23 1256 accept 0 ALIGNMENT 133 YS2-2f19.q1k chr04 189 24 945949 946115 C 166 95.18 1309 reject_low 14 ALIGNMENT 136 YS2-2f19.q1k chr09 24 189 205390 205556 F 166 95.78 1309 reject_low 12 ALIGNMENT 0 YS2-2f19.q1k chr07 647 190 319427 319426 C 458 0.00 1309 reject_low 19 ALIGNMENT 0 YS2-2f19.q1k chr08 647 190 146325 146324 C 458 0.00 1309 reject_low 11 ALIGNMENT 136 YS2-2f19.q1k chr08 189 24 146324 146490 C 166 95.78 1309 reject_low 11 ALIGNMENT 0 YS2-2f19.q1k chr09 191 647 210645 210644 F 457 0.00 1309 reject_low 6 ALIGNMENT 136 YS2-2f19.q1k chr02 24 189 197891 198057 F 166 95.78 1309 reject_low 9 ALIGNMENT 0 YS2-2f19.q1k chr14 190 647 726575 726574 F 458 0.00 1309 reject_low 17 ALIGNMENT 141 YS2-2f19.q1k chr15 24 190 854447 854613 F 167 96.41 1309 reject_low 1 ALIGNMENT 0 YS2-2f19.q1k chr16 190 647 856881 856880 F 458 0.00 1309 reject_low 13 ALIGNMENT 0 YS2-2f19.q1k chr05 647 190 249930 249929 C 458 0.00 1309 reject_low 15 ALIGNMENT 133 YS2-2f19.q1k chr05 189 24 249929 250095 C 166 95.18 1309 reject_low 15 ALIGNMENT 955 YS2-2f19.p1k chr16 1218 30 883987 885196 C 1189 94.95 1283 accept 0 ALIGNMENT 0 YS2-2f19.q1k chr07 190 647 707538 707537 F 458 0.00 1309 reject_low 10 ALIGNMENT 130 YS2-2f19.q1k chr04 189 24 645235 645401 C 166 94.58 1309 reject_low 18 ALIGNMENT 136 YS2-2f19.q1k chr07 24 189 707372 707538 F 166 95.78 1309 reject_low 10 ALIGNMENT 0 YS2-2f19.q1k chr11 647 191 202290 202289 C 457 0.00 1309 reject_low 7 ALIGNMENT 0 YS2-2f19.q1k chr07 190 647 736327 736326 F 458 0.00 1309 reject_low 16 ALIGNMENT 137 YS2-2f19.q1k chr09 24 190 210478 210645 F 167 95.81 1309 reject_low 6 ALIGNMENT 138 YS2-2f19.q1k chr05 191 24 434625 434793 C 168 95.83 1309 reject_low 2 ALIGNMENT 137 YS2-2f19.q1k chr04 24 190 668265 668432 F 167 95.81 1309 reject_low 4 ALIGNMENT 136 YS2-2f19.q1k chr16 24 189 856715 856881 F 166 95.78 1309 reject_low 13 ALIGNMENT 139 YS2-2f19.q1k chr14 24 189 546912 547078 F 166 96.39 1309 reject_low 3 ALIGNMENT 0 YS2-2f19.q1k chr14 190 647 547078 547077 F 458 0.00 1309 reject_low 3 ALIGNMENT 130 YS2-2f19.q1k chr07 189 24 319426 319592 C 166 94.58 1309 reject_low 19 ALIGNMENT 133 YS2-2f19.q1k chr14 24 189 726409 726575 F 166 95.18 1309 reject_low 17 ALIGNMENT 0 YS2-2f19.q1k chr02 190 647 198057 198056 F 458 0.00 1309 reject_low 9 ALIGNMENT 0 YS2-2f19.q1k chr07 191 647 712550 712549 F 457 0.00 1309 reject_low 5 ALIGNMENT 0 YS2-2f19.q1k chr04 647 190 645236 645235 C 458 0.00 1309 reject_low 18 ALIGNMENT 137 YS2-2f19.q1k chr07 24 190 712383 712550 F 167 95.81 1309 reject_low 5 ALIGNMENT 0 YS2-2f19.q1k chr12 190 647 374339 374338 F 458 0.00 1309 reject_low 20 ALIGNMENT 0 YS2-2f19.q1k chr01 190 647 182953 182952 F 458 0.00 1309 reject_low 8 ALIGNMENT 133 YS2-2f19.q1k chr07 24 189 736161 736327 F 166 95.18 1309 reject_low 16 ALIGNMENT 0 YS2-2f19.q1k chr09 190 647 205556 205555 F 458 0.00 1309 reject_low 12 ALIGNMENT 0 YS2-2f19.q1k chr05 647 192 434626 434625 C 456 0.00 1309 reject_low 2 ALIGNMENT 128 YS2-2f19.q1k chr12 24 189 374174 374339 F 166 94.58 1309 reject_low 20 ALIGNMENT 0 YS2-2f19.q1k chr04 191 647 668432 668431 F 457 0.00 1309 reject_low 4 ALIGNMENT 0 YS2-2f19.q1k chr15 191 647 854613 854612 F 457 0.00 1309 reject_low 1 ALIGNMENT 136 YS2-2f19.q1k chr01 24 189 182787 182953 F 166 95.78 1309 reject_low 8 ALIGNMENT 137 YS2-2f19.q1k chr11 190 24 202289 202456 C 167 95.81 1309 reject_low 7 ALIGNMENT 0 YS2-2f19.q1k chr04 647 190 945950 945949 C 458 0.00 1309 reject_low 14 ALIGNMENT 719 YS2-2f19.q1k chr16 24 1017 880556 881531 F 994 93.46 1309 accept 0 ALIGNMENT 0 YS2-2f20.q1k chrm 62 300 46314 46313 F 239 0.00 1293 reject_low 14 ALIGNMENT 0 YS2-2f20.q1k chrm 62 292 48093 48092 F 231 0.00 1293 reject_low 12 ALIGNMENT 0 YS2-2f20.q1k chrm 538 366 50777 57006 C 173 0.00 1293 reject_low 9 ALIGNMENT 0 YS2-2f20.q1k chrm 356 532 53882 53881 F 177 0.00 1293 reject_low 7 ALIGNMENT 0 YS2-2f20.q1k chrm 532 575 53750 53735 F 44 0.00 1293 reject_low 10 ALIGNMENT 0 YS2-2f20.q1k chrm 301 62 57072 57071 C 240 0.00 1293 reject_low 9 ALIGNMENT 20 YS2-2f20.q1k chrm 576 597 53736 53757 F 22 100.00 1293|11,0 reject_low 10,11,12,13,14 ALIGNMENT 71 YS2-2f20.q1k chrm 590 854 77931 78183 F 265 86.79 1293 reject_bad_break 0 ALIGNMENT 0 YS2-2f20.q1k chrm 364 532 10455 10454 F 169 0.00 1293 reject_low 5 ALIGNMENT 26 YS2-2f20.q1k chrm 540 597 44197 44249 F 58 87.93 1293|0,11 reject_low 11 ALIGNMENT 38 YS2-2f20.q1k chrm 293 343 48093 48143 F 51 92.16 1293 reject_low 12 ALIGNMENT 24 YS2-2f20.q1k chrm 499 531 53717 53749 F 33 93.94 1293 reject_low 10 ALIGNMENT 28 YS2-2f20.q1k chrm 534 596 47949 48007 F 63 87.30 1293|0,10 reject_low 13,14 ALIGNMENT 0 YS2-2f20.q1k chrm 366 532 76657 76656 F 167 0.00 1293 reject_low 2 ALIGNMENT 0 YS2-2f20.q1k chrm 539 62 57324 57323 C 478 0.00 1293 reject_low 3 ALIGNMENT 349 YS2-2f20.q1k chrm 29 546 77391 77938 F 518 93.63 1293 reject_bad_break 0 ALIGNMENT 0 YS2-2f20.q1k chrm 354 532 66878 66877 F 179 0.00 1293 reject_low 4 ALIGNMENT 48 YS2-2f20.q1k chrm 291 365 76584 76657 F 75 89.33 1293 reject_low 2 ALIGNMENT 0 YS2-2f20.q1k chrm 587 586 47998 53746 F 0 0.00 1293 reject_low 13,14 ALIGNMENT 0 YS2-2f20.q1k chrm 62 290 43967 43966 F 229 0.00 1293 reject_low 13 ALIGNMENT 0 YS2-2f20.q1k chrm 532 369 12245 12244 C 164 0.00 1293 reject_low 1 ALIGNMENT 33 YS2-2f20.q1k chrm 301 343 46314 46356 F 43 95.35 1293 reject_low 14 ALIGNMENT 59 YS2-2f20.q1k chrm 599 539 50716 50776 C 61 100.00 1293 reject_low 9 ALIGNMENT 0 YS2-2f20.q1k chrm 62 539 44197 44196 F 478 0.00 1293 reject_low 11 ALIGNMENT 0 YS2-2f20.q1k chrm 345 533 44022 47948 F 189 0.00 1293 reject_low 13 ALIGNMENT 610 YS2-2f20.p1k chrm 895 29 78494 79365 C 867 97.81 1207 reject_bad_break 0 ALIGNMENT 21 YS2-2f20.q1k chrm 596 540 57264 57323 C 57 82.46 1293 reject_low 3 ALIGNMENT 24 YS2-2f20.q1k chrm 499 537 53666 53704 F 39 87.18 1293 reject_low 12 ALIGNMENT 41 YS2-2f20.q1k chrm 365 302 57007 57071 C 64 89.06 1293 reject_low 9 ALIGNMENT 38 YS2-2f20.q1k chrm 291 344 43967 44021 F 54 90.74 1293 reject_low 13 ALIGNMENT 0 YS2-2f20.q1k chrm 62 498 53717 53716 F 437 0.00 1293 reject_low 10 ALIGNMENT 0 YS2-2f20.q1k chrm 300 62 71257 71256 C 239 0.00 1293 reject_low 6 ALIGNMENT 0 YS2-2f20.q1k chrm 532 345 47475 47474 C 188 0.00 1293 reject_low 8 ALIGNMENT 0 YS2-2f20.q1k chrm 344 533 46357 47948 F 190 0.00 1293 reject_low 14 ALIGNMENT 0 YS2-2f20.q1k chrm 300 62 47518 47517 C 239 0.00 1293 reject_low 8 ALIGNMENT 0 YS2-2f20.q1k chrm 547 589 77939 77930 F 43 0.00 1293 reject_bad_break 0 ALIGNMENT 0 YS2-2f20.q1k chrm 300 62 12312 12311 C 239 0.00 1293 reject_low 1 ALIGNMENT 39 YS2-2f20.q1k chrm 294 353 66819 66878 F 60 88.33 1293 reject_low 4 ALIGNMENT 0 YS2-2f20.q1k chrm 538 575 53705 53735 F 38 0.00 1293 reject_low 12 ALIGNMENT 36 YS2-2f20.q1k chrm 302 363 10394 10455 F 62 88.71 1293 reject_low 5 ALIGNMENT 0 YS2-2f20.q1k chrm 62 290 76584 76583 F 229 0.00 1293 reject_low 2 ALIGNMENT 0 YS2-2f20.q1k chrm 62 293 66819 66818 F 232 0.00 1293 reject_low 4 ALIGNMENT 42 YS2-2f20.q1k chrm 350 301 71207 71256 C 50 96.00 1293 reject_low 6 ALIGNMENT 0 YS2-2f20.q1k chrm 344 498 48144 53665 F 155 0.00 1293 reject_low 12 ALIGNMENT 0 YS2-2f20.q1k chrm 62 301 10394 10393 F 240 0.00 1293 reject_low 5 ALIGNMENT 0 YS2-2f20.q1k chrm 62 302 53828 53827 F 241 0.00 1293 reject_low 7 ALIGNMENT 0 YS2-2f20.q1k chrm 532 351 71208 71207 C 182 0.00 1293 reject_low 6 ALIGNMENT 39 YS2-2f20.q1k chrm 303 355 53828 53882 F 53 92.45 1293 reject_low 7 ALIGNMENT 0 YS2-2f20.q1k chrm 587 586 44239 53746 F 0 0.00 1293 reject_low 11 ALIGNMENT 49 YS2-2f20.q1k chrm 368 301 12244 12311 C 68 91.18 1293 reject_low 1 ALIGNMENT 34 YS2-2f20.q1k chrm 344 301 47474 47517 C 44 95.45 1293 reject_low 8 ALIGNMENT 0 YS2-2f21.q1k chr14 227 62 443814 443813 C 166 0.00 1263 reject_low 1 ALIGNMENT 739 YS2-2f21.q1k chr15 27 887 506154 507009 F 861 96.75 1263 accept 0 ALIGNMENT 272 YS2-2f21.q1k chr14 628 228 443413 443813 C 401 89.78 1263 reject_low 1 ALIGNMENT 0 YS2-2f22.q1k vc_7 53 54 5172 6360 C 0 0.00 725 reject_low 11 ALIGNMENT 370 YS2-2f22.q1k vc_7 544 1 2033 2569 C 544 90.44 725 reject_low 1 ALIGNMENT 319 YS2-2f22.p1k vc_7 1 488 13918 14406 F 488 89.55 611 reject_low 6 ALIGNMENT 0 YS2-2f22.q1k vc_4 62 316 1888 1887 F 255 0.00 725 reject_low 12 ALIGNMENT 315 YS2-2f22.q1k vc_4 422 1 5234 5654 C 422 92.42 725 reject_low 7 ALIGNMENT 319 YS2-2f22.p1k vc_2 488 1 1261 1749 C 488 89.75 611 reject_low 4 ALIGNMENT 0 YS2-2f22.q1k vc_7 305 304 4700 4922 C 2 0.00 725 reject_low 11 ALIGNMENT 370 YS2-2f22.q1k vc_5 1 544 2556 3092 F 544 90.44 725 reject_vc 0 ALIGNMENT 266 YS2-2f22.q1k vc_2 1 303 2322 2623 F 303 96.37 725 reject_low 9 ALIGNMENT 102 YS2-2f22.q1k vc_4 317 544 1888 2108 F 228 83.77 725 reject_low 12 ALIGNMENT 319 YS2-2f22.p1k vc_7 1 488 456 944 F 488 89.55 611 reject_low 1 ALIGNMENT 319 YS2-2f22.p1k vc_1 488 1 1261 1749 C 488 89.75 611 reject_low 3 ALIGNMENT 319 YS2-2f22.p1k vc_3 488 1 1261 1749 C 488 89.75 611 reject_low 5 ALIGNMENT 56 YS2-2f22.q1k vc_7 422 306 4585 4699 C 117 84.62 725 reject_low 11 ALIGNMENT 266 YS2-2f22.q1k vc_3 1 303 2689 2990 F 303 96.37 725 reject_low 10 ALIGNMENT 323 YS2-2f22.p1k vc_6 1 545 3712 4258 F 545 87.52 611 reject_low 2 ALIGNMENT 51 YS2-2f22.q1k vc_7 54 3 6360 6411 C 52 100.00 725|1,0 reject_low 11 ALIGNMENT 323 YS2-2f22.p1k vc_5 545 1 4123 4669 C 545 87.89 611 reject_vc 0 ALIGNMENT 212 YS2-2f22.q1k vc_7 303 53 4923 5172 C 251 95.22 725|0,1 reject_low 11 ALIGNMENT 266 YS2-2f22.q1k vc_1 1 303 2689 2990 F 303 96.37 725 reject_low 8 ALIGNMENT 955 YS2-2f23.p1k chr04 1198 35 482855 484021 C 1164 94.67 1244 accept 0 ALIGNMENT 133 YS2-2f24.q1k vc_2 424 676 2164 2409 F 253 87.35 1328 reject_low 9 ALIGNMENT 131 YS2-2f24.q1k vc_4 676 424 5565 5812 C 253 86.96 1328 reject_low 11 ALIGNMENT 133 YS2-2f24.q1k vc_3 424 676 2531 2776 F 253 87.35 1328 reject_low 10 ALIGNMENT 0 YS2-2f24.q1k vc_5 385 122 5064 5063 C 264 0.00 1328 reject_low 18 ALIGNMENT 118 YS2-2f24.q1k vc_4 424 587 6353 6514 F 164 92.07 1328 reject_low 13 ALIGNMENT 0 YS2-2f24.q1k vc_4 423 122 5813 5812 C 302 0.00 1328 reject_low 11 ALIGNMENT 32 YS2-2f24.q1k vc_2 422 384 2107 2145 C 39 94.87 1328 reject_low 16 ALIGNMENT 0 YS2-2f24.q1k vc_2 122 423 2164 2163 F 302 0.00 1328 reject_low 9 ALIGNMENT 353 YS2-2f24.p1k vc_5 520 1 4160 4669 C 520 90.96 523 reject_low 1 ALIGNMENT 274 YS2-2f24.q1k chr16 57 384 36261 36586 F 328 95.73 1328 accept 0 ALIGNMENT 0 YS2-2f24.q1k vc_5 385 122 37 36 C 264 0.00 1328 reject_low 20 ALIGNMENT 350 YS2-2f24.p1k vc_3 520 1 1240 1749 C 520 90.77 523 reject_low 6 ALIGNMENT 32 YS2-2f24.q1k vc_4 384 422 5831 5869 F 39 94.87 1328 reject_low 13 ALIGNMENT 353 YS2-2f24.p1k vc_6 1 520 3712 4221 F 520 90.58 523 reject_low 3 ALIGNMENT 0 YS2-2f24.q1k vc_4 122 423 126 125 F 302 0.00 1328 reject_low 12 ALIGNMENT 32 YS2-2f24.q1k vc_1 422 384 2474 2512 C 39 94.87 1328 reject_low 15 ALIGNMENT 133 YS2-2f24.q1k vc_7 676 424 2482 2727 C 253 87.35 1328 reject_low 2 ALIGNMENT 0 YS2-2f24.q1k vc_4 122 383 5831 5830 F 262 0.00 1328 reject_low 13 ALIGNMENT 0 YS2-2f24.q1k vc_4 423 423 5870 6352 F 1 0.00 1328 reject_low 13 ALIGNMENT 133 YS2-2f24.q1k vc_5 424 676 2398 2643 F 253 87.35 1328 reject_low 1 ALIGNMENT 0 YS2-2f24.q1k vc_2 383 122 2146 2145 C 262 0.00 1328 reject_low 16 ALIGNMENT 350 YS2-2f24.p1k vc_1 520 1 1240 1749 C 520 90.77 523 reject_low 4 ALIGNMENT 0 YS2-2f24.q1k vc_3 122 423 2531 2530 F 302 0.00 1328 reject_low 10 ALIGNMENT 76 YS2-2f24.q1k vc_4 510 424 1448 1534 C 87 96.55 1328 reject_low 14 ALIGNMENT 30 YS2-2f24.q1k vc_7 387 422 13525 13560 F 36 94.44 1328 reject_low 19 ALIGNMENT 31 YS2-2f24.q1k vc_5 422 386 5027 5063 C 37 94.59 1328 reject_low 18 ALIGNMENT 344 YS2-2f24.p1k vc_7 1 520 13918 14427 F 520 90.00 523 reject_low 7 ALIGNMENT 0 YS2-2f24.q1k vc_4 423 122 1535 1534 C 302 0.00 1328 reject_low 14 ALIGNMENT 118 YS2-2f24.q1k vc_4 424 587 126 287 F 164 92.07 1328 reject_low 12 ALIGNMENT 350 YS2-2f24.p1k vc_2 520 1 1240 1749 C 520 90.77 523 reject_low 5 ALIGNMENT 0 YS2-2f24.q1k vc_3 383 122 2513 2512 C 262 0.00 1328 reject_low 17 ALIGNMENT 344 YS2-2f24.p1k vc_7 1 520 456 965 F 520 90.00 523 reject_low 2 ALIGNMENT 0 YS2-2f24.q1k vc_7 423 122 2728 2727 C 302 0.00 1328 reject_low 2 ALIGNMENT 133 YS2-2f24.q1k vc_1 424 676 2531 2776 F 253 87.35 1328 reject_low 8 ALIGNMENT 0 YS2-2f24.q1k vc_5 122 423 2398 2397 F 302 0.00 1328 reject_low 1 ALIGNMENT 0 YS2-2f24.q1k vc_1 383 122 2513 2512 C 262 0.00 1328 reject_low 15 ALIGNMENT 30 YS2-2f24.q1k vc_5 421 386 1 36 C 36 94.44 1328 reject_low 20 ALIGNMENT 32 YS2-2f24.q1k vc_3 422 384 2474 2512 C 39 94.87 1328 reject_low 17 ALIGNMENT 0 YS2-2f24.q1k vc_1 122 423 2531 2530 F 302 0.00 1328 reject_low 8 ALIGNMENT 0 YS2-2f24.q1k vc_7 122 386 13525 13524 F 265 0.00 1328 reject_low 19 ALIGNMENT 513 YS2-2g02.p1k chr04 32 602 256493 257058 F 571 98.95 621 accept 0 ALIGNMENT 0 YS2-2g02.p1k chr04 603 621 257058 257057 F 19 0.00 621 accept 0 ALIGNMENT 943 YS2-2g03.p1k chr14 29 1139 161300 162421 F 1111 96.58 1240 accept 0 ALIGNMENT 721 YS2-2g03.q1k chr14 889 5 166171 167047 C 885 95.03 1279 accept 0 ALIGNMENT 942 YS2-2g04.p1k chr13 1105 37 741754 742839 C 1069 96.73 1263 accept 0 ALIGNMENT 667 YS2-2g04.q1k chr13 3 961 736959 737922 F 959 91.35 1278 accept 0 ALIGNMENT 679 YS2-2g05.q1k chr12 50 909 466540 467397 F 860 94.30 1302 reject_low 1 ALIGNMENT 90 YS2-2g05.p1k chr12 988 878 472469 472582 C 111 94.59 1323 reject_low 4 ALIGNMENT 0 YS2-2g05.p1k chr12 877 62 482163 482162 C 816 0.00 1323 reject_low 5 ALIGNMENT 104 YS2-2g05.p1k chr12 1083 878 468710 468930 C 206 85.92 1323 reject_low 1 ALIGNMENT 90 YS2-2g05.p1k chr12 988 878 485701 485814 C 111 94.59 1323 reject_low 6 ALIGNMENT 0 YS2-2g05.p1k chr12 877 62 472583 472582 C 816 0.00 1323 reject_low 4 ALIGNMENT 87 YS2-2g05.p1k chr12 121 35 451419 451505 C 87 100.00 1323 reject_low 2 ALIGNMENT 0 YS2-2g05.p1k chr12 871 62 489473 489472 C 810 0.00 1323 reject_low 3 ALIGNMENT 0 YS2-2g05.p1k chr12 877 62 468931 468930 C 816 0.00 1323 reject_low 1 ALIGNMENT 679 YS2-2g05.q1k chr12 50 909 457403 458260 F 860 94.30 1302 accept 0 ALIGNMENT 96 YS2-2g05.p1k chr12 988 872 489353 489472 C 117 94.87 1323 reject_low 3 ALIGNMENT 878 YS2-2g05.p1k chr12 1083 35 459573 460642 C 1049 95.33 1323 accept 0 ALIGNMENT 0 YS2-2g05.p1k chr12 788 122 451420 451419 C 667 0.00 1323 reject_low 2 ALIGNMENT 90 YS2-2g05.p1k chr12 988 878 482049 482162 C 111 94.59 1323 reject_low 5 ALIGNMENT 0 YS2-2g05.p1k chr12 877 62 485815 485814 C 816 0.00 1323 reject_low 6 ALIGNMENT 992 YS2-2g06.p1k chr16 1157 29 866758 867902 C 1129 96.99 1316 accept 0 ALIGNMENT 582 YS2-2g06.q1k chr16 1 731 861661 862388 F 731 94.12 1120 accept 0 ALIGNMENT 469 YS2-2g08.q1k chr09 770 54 31271 31975 C 717 89.96 1313 accept 0 ALIGNMENT 699 YS2-2g08.p1k chr09 31 764 31247 31979 F 734 99.18 783 accept 0 ALIGNMENT 0 YS2-2g08.p1k chr09 765 783 31979 31978 F 19 0.00 783 accept 0 ALIGNMENT 1050 YS2-2g10.p1k chr02 27 1264 793274 794521 F 1238 95.80 1296 accept 0 ALIGNMENT 423 YS2-2g10.q1k chr02 742 76 794685 795327 C 667 90.85 1431 accept 0 ALIGNMENT 89 YS2-2g11.q1k vc_7 691 448 4950 5172 C 244 84.84 1382 reject_vc 10 ALIGNMENT 41 YS2-2g11.q1k vc_1 238 198 2472 2512 C 41 100.00 1382 reject_vc 12 ALIGNMENT 0 YS2-2g11.q1k vc_1 164 237 2531 2530 F 74 0.00 1382 reject_vc 2 ALIGNMENT 0 YS2-2g11.q1k vc_7 403 164 6406 6405 C 240 0.00 1382 reject_vc 10 ALIGNMENT 279 YS2-2g11.q1k vc_5 238 691 2398 2830 F 454 90.75 1382 reject_vc 5 ALIGNMENT 0 YS2-2g11.p1k chrm 151 155 26738 26732 F 5 0.00 210 reject_bad_break 0 ALIGNMENT 0 YS2-2g11.q1k vc_4 239 238 5872 6353 F 0 0.00 1382 reject_vc 9 ALIGNMENT 279 YS2-2g11.q1k vc_1 238 691 2531 2963 F 454 90.75 1382 reject_vc 2 ALIGNMENT 0 YS2-2g11.q1k vc_4 237 164 5813 5812 C 74 0.00 1382 reject_vc 7 ALIGNMENT 41 YS2-2g11.q1k vc_2 238 198 2105 2145 C 41 100.00 1382 reject_vc 13 ALIGNMENT 0 YS2-2g11.q1k vc_4 237 164 1535 1534 C 74 0.00 1382 reject_vc 11 ALIGNMENT 277 YS2-2g11.q1k vc_4 691 238 5378 5812 C 454 90.75 1382 reject_vc 7 ALIGNMENT 0 YS2-2g11.q1k vc_3 197 164 2513 2512 C 34 0.00 1382 reject_vc 14 ALIGNMENT 0 YS2-2g11.q1k vc_5 199 164 5064 5063 C 36 0.00 1382 reject_vc 15 ALIGNMENT 38 YS2-2g11.q1k vc_7 201 238 13525 13562 F 38 100.00 1382 reject_vc 16 ALIGNMENT 0 YS2-2g11.p1k chrm 193 210 26768 26767 F 18 0.00 210 reject_bad_break 0 ALIGNMENT 279 YS2-2g11.q1k vc_3 238 691 2531 2963 F 454 90.75 1382 reject_vc 4 ALIGNMENT 39 YS2-2g11.q1k vc_5 238 200 5025 5063 C 39 100.00 1382 reject_vc 15 ALIGNMENT 87 YS2-2g11.q1k vc_4 326 238 1446 1534 C 89 100.00 1382 reject_vc 11 ALIGNMENT 0 YS2-2g11.q1k vc_2 164 237 2164 2163 F 74 0.00 1382 reject_vc 3 ALIGNMENT 279 YS2-2g11.q1k vc_7 691 238 2295 2727 C 454 90.75 1382 reject_vc 6 ALIGNMENT 36 YS2-2g11.q1k vc_5 235 200 1 36 C 36 100.00 1382 reject_vc 17 ALIGNMENT 157 YS2-2g11.q1k vc_4 238 399 126 287 F 162 99.38 1382 reject_vc 8 ALIGNMENT 0 YS2-2g11.q1k vc_4 164 197 5831 5830 F 34 0.00 1382 reject_vc 9 ALIGNMENT 36 YS2-2g11.q1k vc_7 441 404 6368 6405 C 38 100.00 1382 reject_vc 10 ALIGNMENT 41 YS2-2g11.q1k vc_4 198 238 5831 5871 F 41 100.00 1382 reject_vc 9 ALIGNMENT 0 YS2-2g11.q1k vc_7 237 164 2728 2727 C 74 0.00 1382 reject_vc 6 ALIGNMENT 0 YS2-2g11.q1k vc_4 164 237 126 125 F 74 0.00 1382 reject_vc 8 ALIGNMENT 41 YS2-2g11.q1k vc_3 238 198 2472 2512 C 41 100.00 1382 reject_vc 14 ALIGNMENT 0 YS2-2g11.q1k vc_5 199 164 37 36 C 36 0.00 1382 reject_vc 17 ALIGNMENT 279 YS2-2g11.q1k vc_2 238 691 2164 2596 F 454 90.75 1382 reject_vc 3 ALIGNMENT 0 YS2-2g11.q1k vc_3 164 237 2531 2530 F 74 0.00 1382 reject_vc 4 ALIGNMENT 0 YS2-2g11.q1k vc_7 447 442 5173 6367 C 6 0.00 1382 reject_vc 10 ALIGNMENT 0 YS2-2g11.q1k vc_1 197 164 2513 2512 C 34 0.00 1382 reject_vc 12 ALIGNMENT 0 YS2-2g11.q1k vc_5 164 237 2398 2397 F 74 0.00 1382 reject_vc 5 ALIGNMENT 104 YS2-2g11.p1k chrm 29 150 26616 26737 F 122 99.18 210 reject_bad_break 0 ALIGNMENT 157 YS2-2g11.q1k vc_4 238 399 6353 6514 F 162 99.38 1382|1,0 reject_vc 9 ALIGNMENT 0 YS2-2g11.q1k vc_7 164 200 13525 13524 F 37 0.00 1382 reject_vc 16 ALIGNMENT 0 YS2-2g11.q1k vc_2 197 164 2146 2145 C 34 0.00 1382 reject_vc 13 ALIGNMENT 20 YS2-2g11.p1k chrm 156 192 26733 26768 F 37 97.30 210 reject_bad_break 0 ALIGNMENT 97 YS2-2g11.q1k chrm 197 76 26616 26737 C 122 96.72 1382 accept_chi 1 ALIGNMENT 92 YS2-2g12.p1k vc_7 1025 1216 100 304 F 192 85.42 1319 reject_low 4 ALIGNMENT 0 YS2-2g12.p1k vc_7 62 1024 13562 13561 F 963 0.00 1319 reject_low 5 ALIGNMENT 0 YS2-2g12.p1k vc_4 62 1024 5871 5870 F 963 0.00 1319 reject_low 2 ALIGNMENT 92 YS2-2g12.p1k vc_4 1025 1216 5871 6075 F 192 85.42 1319 reject_low 2 ALIGNMENT 92 YS2-2g12.p1k vc_5 1216 1025 4821 5025 C 192 85.42 1319 reject_low 3 ALIGNMENT 743 YS2-2g12.q1k chr04 3 945 1356441 1357378 F 943 94.38 1282 accept_chi 1 ALIGNMENT 92 YS2-2g12.p1k vc_7 1025 1216 13562 13766 F 192 85.42 1319 reject_low 5 ALIGNMENT 0 YS2-2g12.p1k vc_5 1024 62 5026 5025 C 963 0.00 1319 reject_low 3 ALIGNMENT 938 YS2-2g12.p1k chr04 1007 27 1356397 1357378 C 981 99.39 1319 accept_chi 0 ALIGNMENT 0 YS2-2g12.p1k vc_7 62 1024 100 99 F 963 0.00 1319 reject_low 4 ALIGNMENT 503 YS2-2g13.q1k chr15 88 678 913423 914004 F 591 96.79 1374 accept_chi 1 ALIGNMENT 580 YS2-2g13.p1k chr15 622 29 913409 914002 C 594 100.00 640 accept_chi 0 ALIGNMENT 0 YS2-2g13.p1k chr15 640 623 913410 913409 C 18 0.00 640 accept_chi 0 ALIGNMENT 0 YS2-2g14.q1k chr14 511 345 555262 555261 C 167 0.00 1379 accept 0 ALIGNMENT 376 YS2-2g14.p1k vc_6 1 591 3712 4314 F 591 88.49 618 reject_low 3 ALIGNMENT 0 YS2-2g14.q1k vc_5 346 77 5064 5063 C 270 0.00 1379 reject_low 19 ALIGNMENT 285 YS2-2g14.q1k chr14 344 41 555261 555565 C 304 98.36 1379 accept 0 ALIGNMENT 0 YS2-2g14.q1k vc_1 77 384 2531 2530 F 308 0.00 1379 reject_low 8 ALIGNMENT 306 YS2-2g14.q1k vc_7 857 385 2269 2727 C 473 90.49 1379 reject_low 2 ALIGNMENT 38 YS2-2g14.q1k vc_3 385 345 2472 2512 C 41 97.56 1379 reject_low 18 ALIGNMENT 0 YS2-2g14.q1k vc_4 384 77 5813 5812 C 308 0.00 1379 reject_low 11 ALIGNMENT 0 YS2-2g14.q1k vc_2 77 384 2164 2163 F 308 0.00 1379 reject_low 9 ALIGNMENT 0 YS2-2g14.q1k vc_3 511 386 2473 2472 C 126 0.00 1379 reject_low 18 ALIGNMENT 0 YS2-2g14.q1k vc_7 386 511 13562 13561 F 126 0.00 1379 reject_low 20 ALIGNMENT 306 YS2-2g14.q1k vc_5 385 857 2398 2856 F 473 90.49 1379 reject_low 1 ALIGNMENT 108 YS2-2g14.q1k vc_7 857 599 4924 5169 C 259 84.17 1379 reject_low 13 ALIGNMENT 0 YS2-2g14.q1k vc_3 77 384 2531 2530 F 308 0.00 1379 reject_low 10 ALIGNMENT 0 YS2-2g14.q1k vc_7 77 347 13525 13524 F 271 0.00 1379 reject_low 20 ALIGNMENT 0 YS2-2g14.q1k vc_5 511 383 2 1 C 129 0.00 1379 reject_low 21 ALIGNMENT 38 YS2-2g14.q1k vc_4 345 385 5831 5871 F 41 97.56 1379 reject_low 14 ALIGNMENT 373 YS2-2g14.p1k vc_3 591 1 1147 1749 C 591 88.49 618 reject_low 6 ALIGNMENT 306 YS2-2g14.q1k vc_1 385 857 2531 2989 F 473 90.49 1379 reject_low 8 ALIGNMENT 367 YS2-2g14.p1k vc_7 1 591 456 1058 F 591 87.99 618 reject_low 2 ALIGNMENT 0 YS2-2g14.q1k vc_4 511 474 1447 1446 C 38 0.00 1379 reject_low 15 ALIGNMENT 35 YS2-2g14.q1k vc_7 348 385 13525 13562 F 38 97.37 1379 reject_low 20 ALIGNMENT 0 YS2-2g14.q1k vc_5 77 384 2398 2397 F 308 0.00 1379 reject_low 1 ALIGNMENT 153 YS2-2g14.q1k vc_4 385 547 6353 6514 F 163 98.77 1379|1,0 reject_low 14 ALIGNMENT 0 YS2-2g14.q1k vc_4 77 384 126 125 F 308 0.00 1379 reject_low 12 ALIGNMENT 306 YS2-2g14.q1k vc_2 385 857 2164 2622 F 473 90.49 1379 reject_low 9 ALIGNMENT 0 YS2-2g14.q1k vc_4 384 77 1535 1534 C 308 0.00 1379 reject_low 15 ALIGNMENT 0 YS2-2g14.q1k vc_5 346 77 37 36 C 270 0.00 1379 reject_low 21 ALIGNMENT 33 YS2-2g14.q1k vc_5 382 347 1 36 C 36 97.22 1379 reject_low 21 ALIGNMENT 373 YS2-2g14.p1k vc_2 591 1 1147 1749 C 591 88.49 618 reject_low 5 ALIGNMENT 0 YS2-2g14.q1k vc_5 511 386 5026 5025 C 126 0.00 1379 reject_low 19 ALIGNMENT 38 YS2-2g14.q1k vc_1 385 345 2472 2512 C 41 97.56 1379 reject_low 16 ALIGNMENT 301 YS2-2g14.q1k vc_4 857 385 5352 5812 C 473 90.27 1379 reject_low 11 ALIGNMENT 36 YS2-2g14.q1k vc_5 385 347 5025 5063 C 39 97.44 1379 reject_low 19 ALIGNMENT 153 YS2-2g14.q1k vc_4 385 547 126 287 F 163 98.77 1379 reject_low 12 ALIGNMENT 0 YS2-2g14.q1k vc_2 511 386 2106 2105 C 126 0.00 1379 reject_low 17 ALIGNMENT 373 YS2-2g14.p1k vc_1 591 1 1147 1749 C 591 88.49 618 reject_low 4 ALIGNMENT 0 YS2-2g14.q1k vc_1 511 386 2473 2472 C 126 0.00 1379 reject_low 16 ALIGNMENT 38 YS2-2g14.q1k vc_2 385 345 2105 2145 C 41 97.56 1379 reject_low 17 ALIGNMENT 306 YS2-2g14.q1k vc_3 385 857 2531 2989 F 473 90.49 1379 reject_low 10 ALIGNMENT 0 YS2-2g14.q1k vc_7 384 77 2728 2727 C 308 0.00 1379 reject_low 2 ALIGNMENT 376 YS2-2g14.p1k vc_5 591 1 4067 4669 C 591 88.66 618 reject_low 1 ALIGNMENT 85 YS2-2g14.q1k vc_4 473 385 1446 1534 C 89 98.88 1379 reject_low 15 ALIGNMENT 0 YS2-2g14.q1k vc_1 344 77 2513 2512 C 268 0.00 1379 reject_low 16 ALIGNMENT 0 YS2-2g14.q1k vc_4 77 344 5831 5830 F 268 0.00 1379 reject_low 14 ALIGNMENT 0 YS2-2g14.q1k vc_4 386 385 5872 6353 F 0 0.00 1379 reject_low 14 ALIGNMENT 0 YS2-2g14.q1k vc_3 344 77 2513 2512 C 268 0.00 1379 reject_low 18 ALIGNMENT 0 YS2-2g14.q1k vc_2 344 77 2146 2145 C 268 0.00 1379 reject_low 17 ALIGNMENT 0 YS2-2g14.q1k vc_7 598 77 5170 5169 C 522 0.00 1379 reject_low 13 ALIGNMENT 367 YS2-2g14.p1k vc_7 1 591 13918 14520 F 591 87.99 618 reject_low 7 ALIGNMENT 960 YS2-2g15.p1k chr07 29 1152 517191 518326 F 1124 95.73 1211 accept 0 ALIGNMENT 659 YS2-2g15.q1k chr07 892 1 522477 523362 C 892 92.94 1155 accept 0 ALIGNMENT 939 YS2-2g16.p1k chr03 1233 29 98006 99219 C 1205 93.86 1295 accept 0 ALIGNMENT 522 YS2-2g16.q1k chr03 1 675 94161 94826 F 675 94.07 1209 accept 0 ALIGNMENT 924 YS2-2g19.p1k chr07 28 1151 889445 890578 F 1124 94.66 1180 accept 0 ALIGNMENT 587 YS2-2g19.q1k chr07 712 1 893814 894524 C 712 94.52 1049 accept 0 ALIGNMENT 945 YS2-2g23.p1k chr12 29 1182 1025365 1026513 F 1154 95.49 1182 accept 0 ALIGNMENT 307 YS2-2g24.p1k chr02 30 360 606203 606533 F 331 99.09 379 accept 0 ALIGNMENT 0 YS2-2g24.p1k chr02 361 379 606533 606532 F 19 0.00 379 accept 0 ALIGNMENT 911 YS2-2h01.p1k chr16 29 1082 489017 490082 F 1054 96.96 1244 accept 0 ALIGNMENT 719 YS2-2h01.q1k chr16 903 1 491743 492630 C 903 94.46 1215 accept 0 ALIGNMENT 638 YS2-2h02.p1k chr08 687 27 343673 344332 C 661 99.85 706 accept_chi 0 ALIGNMENT 0 YS2-2h02.p1k chr08 706 688 343674 343673 C 19 0.00 706 accept_chi 0 ALIGNMENT 0 YS2-2h02.q1k vc_2 62 641 2166 2165 F 580 0.00 1184 reject_low 2 ALIGNMENT 67 YS2-2h02.q1k vc_2 642 814 2166 2326 F 173 84.39 1184 reject_low 2 ALIGNMENT 24 YS2-2h02.q1k vc_2 630 598 2114 2145 C 33 93.94 1184 reject_low 3 ALIGNMENT 0 YS2-2h02.q1k vc_2 597 62 2146 2145 C 536 0.00 1184 reject_low 3 ALIGNMENT 558 YS2-2h02.q1k chr08 1 582 343736 344317 F 582 99.48 1184 accept_chi 1 ALIGNMENT 1043 YS2-2h03.p1k chr12 1220 29 454220 455415 C 1192 96.48 1296 accept 0 ALIGNMENT 1043 YS2-2h03.p1k chr12 1220 29 463357 464552 C 1192 96.48 1296 reject_low 1 ALIGNMENT 820 YS2-2h03.q1k chr12 31 1088 454088 455130 F 1058 93.86 1392 accept 0 ALIGNMENT 818 YS2-2h03.q1k chr12 31 1036 463225 464220 F 1006 94.83 1392 reject_low 1 ALIGNMENT 995 YS2-2h04.p1k chr02 28 1175 664836 665998 F 1148 96.60 1287 accept 0 ALIGNMENT 757 YS2-2h04.q1k chr02 936 4 669075 669997 C 933 94.96 1246 accept 0 ALIGNMENT 992 YS2-2h05.p1k chr13 29 1156 868644 869771 F 1128 96.45 1341 accept 0 ALIGNMENT 609 YS2-2h05.q1k chr13 938 34 873703 874602 C 905 90.06 1326 accept 0 ALIGNMENT 322 YS2-2h05.q1k chr15 802 292 160090 160600 C 511 87.67 1326 reject_low 1 ALIGNMENT 0 YS2-2h05.q1k chr02 721 748 534187 534214 F 28 0.00 1326 reject_low 2 ALIGNMENT 23 YS2-2h05.q1k chr02 749 789 534215 534255 F 41 85.37 1326 reject_low 2 ALIGNMENT 0 YS2-2h05.q1k chr15 291 122 160601 160600 C 170 0.00 1326 reject_low 1 ALIGNMENT 0 YS2-2h05.q1k chr02 122 304 533771 533770 F 183 0.00 1326 reject_low 2 ALIGNMENT 68 YS2-2h05.q1k chr02 305 720 533771 534186 F 416 72.60 1326 reject_low 2 ALIGNMENT 1024 YS2-2h06.p1k chr07 32 1262 461033 462269 F 1231 95.37 1344 accept 0 ALIGNMENT 697 YS2-2h06.q1k chr07 839 1 461982 462817 C 839 95.71 1244 accept 0 ALIGNMENT 730 YS2-2h07.q1k chr11 1008 1 404381 405378 C 1008 92.56 1267 accept 0 ALIGNMENT 1029 YS2-2h07.p1k chr11 35 1250 402139 403352 F 1216 95.48 1366 accept 0 ALIGNMENT 981 YS2-2h09.p1k chr14 1127 29 647726 648838 C 1099 97.54 1249 accept 0 ALIGNMENT 628 YS2-2h09.q1k chr12 844 39 13817 14625 C 806 94.79 1340 ambiguous_tel 1 ALIGNMENT 0 YS2-2h10.p1k chr04 455 437 768061 768060 C 19 0.00 455 accept 0 ALIGNMENT 367 YS2-2h10.p1k chr04 436 32 768060 768465 C 405 99.01 455 accept 0 ALIGNMENT 953 YS2-2h11.p1k chr07 28 1156 994179 995318 F 1129 95.66 1315 accept 0 ALIGNMENT 672 YS2-2h11.q1k chr07 826 48 998331 999103 C 779 96.53 1411 accept 0 ALIGNMENT 274 YS2-2h12.p1k vc_7 1 496 13918 14396 F 496 87.50 706 reject_vc 6 ALIGNMENT 280 YS2-2h12.p1k vc_5 496 1 4191 4669 C 496 87.90 706 reject_vc 3 ALIGNMENT 274 YS2-2h12.p1k vc_7 1 496 456 934 F 496 87.50 706 reject_vc 5 ALIGNMENT 280 YS2-2h12.p1k vc_2 496 1 1271 1749 C 496 87.90 706 reject_vc 1 ALIGNMENT 280 YS2-2h12.p1k vc_6 1 496 3712 4190 F 496 87.90 706 reject_vc 4 ALIGNMENT 280 YS2-2h12.p1k vc_3 496 1 1271 1749 C 496 87.90 706 reject_vc 2 ALIGNMENT 280 YS2-2h12.p1k vc_1 496 1 1271 1749 C 496 87.90 706 reject_vc 0 ALIGNMENT 554 YS2-2h15.q1k chr04 622 6 830087 830702 C 617 98.22 1176 accept 0 ALIGNMENT 0 YS2-2h15.q1k vc_7 680 62 2724 2723 C 619 0.00 1176 reject_low 3 ALIGNMENT 45 YS2-2h15.q1k vc_1 681 815 2535 2665 F 135 81.48 1176 reject_low 1 ALIGNMENT 0 YS2-2h15.q1k vc_1 62 680 2535 2534 F 619 0.00 1176 reject_low 1 ALIGNMENT 45 YS2-2h15.q1k vc_5 681 815 2402 2532 F 135 81.48 1176 reject_low 2 ALIGNMENT 45 YS2-2h15.q1k vc_7 815 681 2593 2723 C 135 81.48 1176 reject_low 3 ALIGNMENT 651 YS2-2h15.p1k chr04 30 720 830080 830770 F 691 99.57 739 accept 0 ALIGNMENT 0 YS2-2h15.p1k chr04 721 739 830770 830769 F 19 0.00 739 accept 0 ALIGNMENT 0 YS2-2h15.q1k vc_5 62 680 2402 2401 F 619 0.00 1176 reject_low 2 ALIGNMENT 905 YS2-2h16.p1k chr12 34 1190 460257 461438 F 1157 94.30 1311 accept 0 ALIGNMENT 645 YS2-2h16.q1k chr12 768 49 460741 461456 C 720 97.22 1384 accept 0 ALIGNMENT 386 YS2-2h16.p1k chr12 680 1190 489754 490269 F 511 92.76 1311 reject_low 3 ALIGNMENT 0 YS2-2h16.p1k chr12 62 679 489754 489753 F 618 0.00 1311 reject_low 3 ALIGNMENT 670 YS2-2h16.p1k chr12 325 1190 451419 452301 F 866 94.00 1311 reject_low 1 ALIGNMENT 506 YS2-2h16.q1k chr12 582 49 489754 490287 C 534 98.50 1384 reject_low 2 ALIGNMENT 645 YS2-2h16.q1k chr12 768 49 451604 452319 C 720 97.22 1384 reject_low 1 ALIGNMENT 0 YS2-2h16.p1k chr12 62 324 451419 451418 F 263 0.00 1311 reject_low 1 ALIGNMENT 45 YS2-2h17.q1k vc_4 240 304 1548 1612 F 65 90.77 938 reject_vc 10 ALIGNMENT 202 YS2-2h17.q1k vc_7 304 53 4923 5172 C 252 94.05 938|0,1 reject_vc 7 ALIGNMENT 176 YS2-2h17.p1k chr16 226 35 202528 202719 C 192 98.96 244 accept 0 ALIGNMENT 0 YS2-2h17.p1k chr16 244 227 202529 202528 C 18 0.00 244 accept 0 ALIGNMENT 0 YS2-2h17.q1k vc_4 239 62 6340 6339 C 178 0.00 938 reject_vc 9 ALIGNMENT 45 YS2-2h17.q1k vc_4 304 240 6275 6339 C 65 90.77 938 reject_vc 9 ALIGNMENT 292 YS2-2h17.q1k vc_5 1 418 2556 2966 F 418 91.15 938 reject_vc 1 ALIGNMENT 41 YS2-2h17.q1k vc_7 418 315 4593 4692 C 104 82.69 938 reject_vc 7 ALIGNMENT 0 YS2-2h17.q1k vc_4 62 239 1548 1547 F 178 0.00 938 reject_vc 10 ALIGNMENT 254 YS2-2h17.q1k vc_1 1 304 2689 2990 F 304 95.07 938 reject_vc 4 ALIGNMENT 47 YS2-2h17.q1k vc_7 54 3 6360 6411 C 52 98.08 938|1,0 reject_vc 7 ALIGNMENT 292 YS2-2h17.q1k vc_7 418 1 2159 2569 C 418 91.15 938 reject_vc 2 ALIGNMENT 45 YS2-2h17.q1k vc_4 304 240 48 112 C 65 90.77 938 reject_vc 8 ALIGNMENT 0 YS2-2h17.q1k vc_4 239 62 113 112 C 178 0.00 938 reject_vc 8 ALIGNMENT 254 YS2-2h17.q1k vc_2 1 304 2322 2623 F 304 95.07 938 reject_vc 5 ALIGNMENT 0 YS2-2h17.q1k vc_4 305 314 1613 1882 F 10 0.00 938 reject_vc 10 ALIGNMENT 254 YS2-2h17.q1k vc_3 1 304 2689 2990 F 304 95.07 938 reject_vc 6 ALIGNMENT 41 YS2-2h17.q1k vc_4 315 418 1883 1982 F 104 82.69 938 reject_vc 10 ALIGNMENT 0 YS2-2h17.q1k vc_7 314 305 4693 4922 C 10 0.00 938 reject_vc 7 ALIGNMENT 0 YS2-2h17.q1k vc_7 53 54 5172 6360 C 0 0.00 938 reject_vc 7 ALIGNMENT 285 YS2-2h17.q1k vc_4 418 1 5242 5654 C 418 90.67 938 reject_vc 3 ALIGNMENT 1050 YS2-2h20.p1k chr10 1311 26 442135 443432 C 1286 95.18 1312 accept 0 ALIGNMENT 431 YS2-2h20.q1k chr10 55 650 439044 439635 F 596 91.61 1312 accept 0 ALIGNMENT 649 YS2-2h21.q1k chr15 4 874 880375 881230 F 871 93.23 1128 accept 0 ALIGNMENT 1005 YS2-2h21.p1k chr15 1200 29 884255 885422 C 1172 96.93 1223 accept 0 ALIGNMENT 686 YS2-2h22.q1k chr16 868 3 556629 557499 C 866 94.00 1072 accept 0 ALIGNMENT 965 YS2-2h22.p1k chr16 37 1152 553690 554808 F 1116 96.42 1214 accept 0 ALIGNMENT 887 YS2-2h24.p1k chr04 1158 22 589102 590242 C 1137 94.11 1250 accept 0 ALIGNMENT 516 YS2-2i01.q1k chr12 772 61 334468 335175 C 712 91.99 1360 accept 0 ALIGNMENT 963 YS2-2i01.p1k chr12 29 1113 330259 331351 F 1085 96.96 1227 accept 0 ALIGNMENT 1019 YS2-2i02.p1k chr13 29 1224 208681 209873 F 1196 96.24 1293 accept 0 ALIGNMENT 651 YS2-2i03.q1k chr16 53 829 387296 388069 F 777 96.01 1444 accept 0 ALIGNMENT 1030 YS2-2i03.p1k chr16 1251 27 390948 392170 C 1225 95.76 1301 accept 0 ALIGNMENT 988 YS2-2i04.p1k chr09 1132 36 303364 304462 C 1097 97.72 1291 accept 0 ALIGNMENT 229 YS2-2i05.p1k chr05 271 27 540259 540503 C 245 100.00 290 accept 0 ALIGNMENT 0 YS2-2i05.p1k chr05 290 272 540260 540259 C 19 0.00 290 accept 0 ALIGNMENT 146 YS2-2i06.p1k vc_6 767 951 6352 6535 F 185 94.59 1262 reject_low 2 ALIGNMENT 0 YS2-2i06.p1k scplasm1 62 766 341 340 F 705 0.00 1262 reject_low 1 ALIGNMENT 992 YS2-2i06.p1k scplasm1 1222 28 3861 5052 C 1195 95.56 1262 accept 0 ALIGNMENT 470 YS2-2i06.q1k scplasm1 6 799 1933 2721 F 794 87.53 1403 accept 0 ALIGNMENT 0 YS2-2i06.p1k vc_6 62 766 6352 6351 F 705 0.00 1262 reject_low 2 ALIGNMENT 270 YS2-2i06.p1k scplasm1 767 1222 341 792 F 456 88.60 1262 reject_low 1 ALIGNMENT 737 YS2-2i07.q1k chr13 965 30 709223 710154 C 936 94.76 1260 accept 0 ALIGNMENT 853 YS2-2i07.p1k chr13 29 1014 705605 706606 F 986 96.96 1189 accept 0 ALIGNMENT 424 YS2-2i08.p1k chr10 472 33 469047 469486 C 440 99.55 490 accept_chi 0 ALIGNMENT 263 YS2-2i08.q1k vc_1 454 829 2531 2902 F 376 90.96 1337 reject_low 2 ALIGNMENT 0 YS2-2i08.q1k vc_2 616 455 2106 2105 C 162 0.00 1337 reject_low 15 ALIGNMENT 0 YS2-2i08.q1k vc_3 616 455 2473 2472 C 162 0.00 1337 reject_low 16 ALIGNMENT 256 YS2-2i08.q1k vc_4 829 454 5439 5812 C 376 90.43 1337 reject_low 7 ALIGNMENT 0 YS2-2i08.q1k vc_4 453 62 5813 5812 C 392 0.00 1337 reject_low 7 ALIGNMENT 0 YS2-2i08.q1k vc_4 62 415 5833 5832 F 354 0.00 1337 reject_low 9 ALIGNMENT 0 YS2-2i08.q1k vc_2 62 453 2164 2163 F 392 0.00 1337 reject_low 3 ALIGNMENT 0 YS2-2i08.q1k vc_4 62 453 126 125 F 392 0.00 1337 reject_low 8 ALIGNMENT 263 YS2-2i08.q1k vc_5 454 829 2398 2769 F 376 90.96 1337 reject_low 5 ALIGNMENT 44 YS2-2i08.q1k vc_7 665 614 6360 6411 C 52 96.15 1337|1,0 reject_low 11 ALIGNMENT 0 YS2-2i08.q1k vc_5 413 62 39 38 C 352 0.00 1337 reject_low 13 ALIGNMENT 0 YS2-2i08.q1k vc_4 453 62 1535 1534 C 392 0.00 1337 reject_low 10 ALIGNMENT 71 YS2-2i08.q1k vc_7 829 664 5011 5172 C 166 82.53 1337|0,1 reject_low 11 ALIGNMENT 0 YS2-2i08.q1k vc_1 62 453 2531 2530 F 392 0.00 1337 reject_low 2 ALIGNMENT 263 YS2-2i08.q1k vc_3 454 829 2531 2902 F 376 90.96 1337 reject_low 4 ALIGNMENT 0 YS2-2i08.q1k vc_5 62 453 2398 2397 F 392 0.00 1337 reject_low 5 ALIGNMENT 0 YS2-2i08.q1k vc_4 616 543 1447 1446 C 74 0.00 1337 reject_low 10 ALIGNMENT 0 YS2-2i08.q1k vc_5 616 452 2 1 C 165 0.00 1337 reject_low 13 ALIGNMENT 0 YS2-2i08.q1k vc_5 616 455 5026 5025 C 162 0.00 1337 reject_low 12 ALIGNMENT 263 YS2-2i08.q1k vc_2 454 829 2164 2535 F 376 90.96 1337 reject_low 3 ALIGNMENT 39 YS2-2i08.q1k vc_2 454 416 2105 2143 C 39 100.00 1337 reject_low 15 ALIGNMENT 0 YS2-2i08.q1k vc_1 616 455 2473 2472 C 162 0.00 1337 reject_low 14 ALIGNMENT 0 YS2-2i08.q1k vc_7 613 62 6412 6411 C 552 0.00 1337 reject_low 11 ALIGNMENT 38 YS2-2i08.q1k vc_5 451 414 1 38 C 38 100.00 1337 reject_low 13 ALIGNMENT 0 YS2-2i08.q1k vc_1 415 62 2511 2510 C 354 0.00 1337 reject_low 14 ALIGNMENT 0 YS2-2i08.q1k vc_7 455 616 13562 13561 F 162 0.00 1337 reject_low 17 ALIGNMENT 41 YS2-2i08.q1k vc_5 454 414 5025 5065 C 41 100.00 1337 reject_low 12 ALIGNMENT 0 YS2-2i08.q1k vc_2 415 62 2144 2143 C 354 0.00 1337 reject_low 15 ALIGNMENT 0 YS2-2i08.p1k chr10 490 473 469048 469047 C 18 0.00 490 accept_chi 0 ALIGNMENT 39 YS2-2i08.q1k vc_3 454 416 2472 2510 C 39 100.00 1337 reject_low 16 ALIGNMENT 263 YS2-2i08.q1k vc_7 829 454 2356 2727 C 376 90.96 1337 reject_low 6 ALIGNMENT 148 YS2-2i08.q1k vc_4 454 615 6353 6514 F 162 97.53 1337|1,0 reject_low 9 ALIGNMENT 0 YS2-2i08.q1k vc_4 455 454 5872 6353 F 0 0.00 1337 reject_low 9 ALIGNMENT 38 YS2-2i08.q1k vc_7 417 454 13525 13562 F 38 100.00 1337 reject_low 17 ALIGNMENT 0 YS2-2i08.q1k vc_7 664 665 5172 6360 C 0 0.00 1337 reject_low 11 ALIGNMENT 148 YS2-2i08.q1k vc_4 454 615 126 287 F 162 97.53 1337 reject_low 8 ALIGNMENT 0 YS2-2i08.q1k chr10 414 616 469486 469485 F 203 0.00 1337 accept_chi 1 ALIGNMENT 0 YS2-2i08.q1k vc_3 415 62 2511 2510 C 354 0.00 1337 reject_low 16 ALIGNMENT 0 YS2-2i08.q1k vc_7 453 62 2728 2727 C 392 0.00 1337 reject_low 6 ALIGNMENT 39 YS2-2i08.q1k vc_1 454 416 2472 2510 C 39 100.00 1337 reject_low 14 ALIGNMENT 0 YS2-2i08.q1k vc_5 413 62 5066 5065 C 352 0.00 1337 reject_low 12 ALIGNMENT 0 YS2-2i08.q1k vc_3 62 453 2531 2530 F 392 0.00 1337 reject_low 4 ALIGNMENT 374 YS2-2i08.q1k chr10 1 413 469075 469486 F 413 97.82 1337 accept_chi 1 ALIGNMENT 0 YS2-2i08.q1k vc_7 62 416 13525 13524 F 355 0.00 1337 reject_low 17 ALIGNMENT 82 YS2-2i08.q1k vc_4 542 454 1446 1534 C 89 97.75 1337 reject_low 10 ALIGNMENT 39 YS2-2i08.q1k vc_4 416 454 5833 5871 F 39 100.00 1337 reject_low 9 ALIGNMENT 0 YS2-2i09.q1k vc_1 137 437 2531 2530 F 301 0.00 1381 reject_low 2 ALIGNMENT 0 YS2-2i09.q1k vc_4 437 137 5813 5812 C 301 0.00 1381 reject_low 7 ALIGNMENT 27 YS2-2i09.q1k vc_5 435 400 1 36 C 36 91.67 1381 reject_low 15 ALIGNMENT 0 YS2-2i09.q1k vc_5 137 437 2398 2397 F 301 0.00 1381 reject_low 5 ALIGNMENT 0 YS2-2i09.q1k vc_4 137 397 5831 5830 F 261 0.00 1381 reject_low 9 ALIGNMENT 0 YS2-2i09.q1k vc_1 397 137 2513 2512 C 261 0.00 1381 reject_low 11 ALIGNMENT 140 YS2-2i09.q1k vc_4 438 600 6353 6514 F 163 96.32 1381|1,0 reject_low 9 ALIGNMENT 0 YS2-2i09.p1k chr05 356 374 396417 396416 F 19 0.00 374 accept_chi 0 ALIGNMENT 316 YS2-2i09.p1k chr05 26 355 396088 396417 F 330 100.00 374 accept_chi 0 ALIGNMENT 30 YS2-2i09.q1k vc_5 438 400 5025 5063 C 39 92.31 1381 reject_low 14 ALIGNMENT 77 YS2-2i09.q1k vc_4 526 438 1446 1534 C 89 96.63 1381 reject_low 10 ALIGNMENT 0 YS2-2i09.q1k vc_3 397 137 2513 2512 C 261 0.00 1381 reject_low 13 ALIGNMENT 224 YS2-2i09.q1k vc_7 763 438 2403 2727 C 326 91.10 1381 reject_low 6 ALIGNMENT 32 YS2-2i09.q1k vc_1 438 398 2472 2512 C 41 92.68 1381 reject_low 11 ALIGNMENT 0 YS2-2i09.q1k vc_5 399 137 37 36 C 263 0.00 1381 reject_low 15 ALIGNMENT 0 YS2-2i09.q1k vc_4 437 137 1535 1534 C 301 0.00 1381 reject_low 10 ALIGNMENT 0 YS2-2i09.q1k vc_7 437 137 2728 2727 C 301 0.00 1381 reject_low 6 ALIGNMENT 273 YS2-2i09.q1k chr05 398 108 396088 396378 C 291 98.97 1381 accept_chi 1 ALIGNMENT 217 YS2-2i09.q1k vc_4 763 438 5486 5812 C 326 90.49 1381 reject_low 7 ALIGNMENT 32 YS2-2i09.q1k vc_2 438 398 2105 2145 C 41 92.68 1381 reject_low 12 ALIGNMENT 0 YS2-2i09.q1k vc_3 137 437 2531 2530 F 301 0.00 1381 reject_low 4 ALIGNMENT 0 YS2-2i09.q1k vc_4 439 438 5872 6353 F 0 0.00 1381 reject_low 9 ALIGNMENT 224 YS2-2i09.q1k vc_5 438 763 2398 2722 F 326 91.10 1381 reject_low 5 ALIGNMENT 0 YS2-2i09.q1k vc_5 399 137 5064 5063 C 263 0.00 1381 reject_low 14 ALIGNMENT 0 YS2-2i09.q1k vc_2 137 437 2164 2163 F 301 0.00 1381 reject_low 3 ALIGNMENT 224 YS2-2i09.q1k vc_1 438 763 2531 2855 F 326 91.10 1381 reject_low 2 ALIGNMENT 224 YS2-2i09.q1k vc_2 438 763 2164 2488 F 326 91.10 1381 reject_low 3 ALIGNMENT 32 YS2-2i09.q1k vc_3 438 398 2472 2512 C 41 92.68 1381 reject_low 13 ALIGNMENT 0 YS2-2i09.q1k vc_2 397 137 2146 2145 C 261 0.00 1381 reject_low 12 ALIGNMENT 0 YS2-2i09.q1k vc_4 137 437 126 125 F 301 0.00 1381 reject_low 8 ALIGNMENT 32 YS2-2i09.q1k vc_4 398 438 5831 5871 F 41 92.68 1381 reject_low 9 ALIGNMENT 224 YS2-2i09.q1k vc_3 438 763 2531 2855 F 326 91.10 1381 reject_low 4 ALIGNMENT 140 YS2-2i09.q1k vc_4 438 600 126 287 F 163 96.32 1381 reject_low 8 ALIGNMENT 31 YS2-2i10.q1k vc_5 450 417 1 34 C 34 97.06 1393 reject_low 8 ALIGNMENT 0 YS2-2i10.p1k chr07 68 427 641160 641159 F 360 0.00 427 reject_low 20 ALIGNMENT 32 YS2-2i10.q1k vc_5 451 417 5027 5061 C 35 97.14 1393 reject_low 7 ALIGNMENT 0 YS2-2i10.p1k chr08 427 77 252939 252938 C 351 0.00 427 reject_low 16 ALIGNMENT 0 YS2-2i10.q1k vc_5 416 134 5062 5061 C 283 0.00 1393 reject_low 7 ALIGNMENT 21 YS2-2i10.q1k chr07 396 375 641139 641160 C 22 100.00 1393 reject_low 19 ALIGNMENT 28 YS2-2i10.p1k chr01 34 70 116481 116517 F 37 94.59 427 reject_low 18 ALIGNMENT 0 YS2-2i10.q1k vc_5 416 134 35 34 C 283 0.00 1393 reject_low 8 ALIGNMENT 34 YS2-2i10.p1k chr07 31 76 70167 70212 F 46 93.48 427 reject_low 14 ALIGNMENT 34 YS2-2i10.q1k chr07 411 366 70167 70212 C 46 93.48 1393 reject_low 10 ALIGNMENT 114 YS2-2i10.q1k vc_3 452 702 2530 2780 F 251 82.87 1393 reject_low 3 ALIGNMENT 33 YS2-2i10.q1k vc_1 451 413 2474 2512 C 39 94.87 1393 reject_low 5 ALIGNMENT 0 YS2-2i10.p1k chr12 89 427 927229 927228 F 339 0.00 427 reject_low 11 ALIGNMENT 27 YS2-2i10.q1k chr08 367 411 365360 365404 F 45 88.89 1393 reject_low 12 ALIGNMENT 33 YS2-2i10.q1k vc_3 451 413 2474 2512 C 39 94.87 1393 reject_low 6 ALIGNMENT 21 YS2-2i10.p1k chr07 46 67 641139 641160 F 22 100.00 427 reject_low 20 ALIGNMENT 114 YS2-2i10.q1k vc_1 452 702 2530 2780 F 251 82.87 1393 reject_low 2 ALIGNMENT 0 YS2-2i10.q1k chr08 134 366 365360 365359 F 233 0.00 1393 reject_low 12 ALIGNMENT 362 YS2-2i10.q1k chr04 32 413 833668 834048 F 382 98.69 1393 accept_chi 1 ALIGNMENT 0 YS2-2i10.q1k vc_3 412 134 2513 2512 C 279 0.00 1393 reject_low 6 ALIGNMENT 28 YS2-2i10.q1k chr01 408 372 116481 116517 C 37 94.59 1393 reject_low 13 ALIGNMENT 0 YS2-2i10.p1k chr08 427 76 365361 365360 C 352 0.00 427 reject_low 17 ALIGNMENT 31 YS2-2i10.p1k chr04 31 76 604239 604284 F 46 91.30 427 reject_low 15 ALIGNMENT 0 YS2-2i10.q1k vc_3 134 451 2530 2529 F 318 0.00 1393 reject_low 3 ALIGNMENT 0 YS2-2i10.q1k vc_5 134 451 2397 2396 F 318 0.00 1393 reject_low 4 ALIGNMENT 0 YS2-2i10.q1k chr07 365 134 70213 70212 C 232 0.00 1393 reject_low 10 ALIGNMENT 30 YS2-2i10.p1k chr12 38 88 927179 927229 F 51 88.24 427 reject_low 11 ALIGNMENT 0 YS2-2i10.q1k vc_1 134 451 2530 2529 F 318 0.00 1393 reject_low 2 ALIGNMENT 0 YS2-2i10.p1k chr01 71 427 116517 116516 F 357 0.00 427 reject_low 18 ALIGNMENT 30 YS2-2i10.q1k chr12 404 354 927179 927229 C 51 88.24 1393 reject_low 9 ALIGNMENT 0 YS2-2i10.q1k vc_1 412 134 2513 2512 C 279 0.00 1393 reject_low 5 ALIGNMENT 114 YS2-2i10.q1k vc_5 452 702 2397 2647 F 251 82.87 1393 reject_low 4 ALIGNMENT 0 YS2-2i10.q1k chr07 374 134 641161 641160 C 241 0.00 1393 reject_low 19 ALIGNMENT 0 YS2-2i10.p1k chr04 427 410 833669 833668 C 18 0.00 427 accept_chi 0 ALIGNMENT 0 YS2-2i10.q1k chr12 353 134 927230 927229 C 220 0.00 1393 reject_low 9 ALIGNMENT 0 YS2-2i10.q1k chr01 371 134 116518 116517 C 238 0.00 1393 reject_low 13 ALIGNMENT 376 YS2-2i10.p1k chr04 409 29 833668 834048 C 381 99.74 427 accept_chi 0 ALIGNMENT 0 YS2-2i10.p1k chr07 77 427 70212 70211 F 351 0.00 427 reject_low 14 ALIGNMENT 28 YS2-2i10.p1k chr08 76 31 252938 252983 C 46 89.13 427 reject_low 16 ALIGNMENT 0 YS2-2i10.p1k chr04 77 427 604284 604283 F 351 0.00 427 reject_low 15 ALIGNMENT 27 YS2-2i10.p1k chr08 75 31 365360 365404 C 45 88.89 427 reject_low 17 ALIGNMENT 645 YS2-2i11.q1k chr10 53 852 315140 315935 F 800 94.62 1379 accept 0 ALIGNMENT 1027 YS2-2i11.p1k chr10 1217 29 320187 321386 C 1189 96.72 1308 accept 0 ALIGNMENT 670 YS2-2i12.p1k scplasm1 35 1084 1900 2950 F 1050 88.86 1335 accept 0 ALIGNMENT 0 YS2-2i14.q1k vc_4 421 333 1447 1446 C 89 0.00 1349 reject_low 10 ALIGNMENT 0 YS2-2i14.q1k vc_4 152 243 126 125 F 92 0.00 1349 reject_low 7 ALIGNMENT 42 YS2-2i14.q1k vc_2 244 203 2105 2146 C 42 100.00 1349 reject_low 12 ALIGNMENT 0 YS2-2i14.q1k vc_1 421 245 2473 2472 C 177 0.00 1349 reject_low 11 ALIGNMENT 0 YS2-2i14.q1k vc_4 406 421 6514 6513 F 16 0.00 1349 reject_low 8 ALIGNMENT 0 YS2-2i14.q1k vc_7 245 421 100 99 F 177 0.00 1349 reject_low 15 ALIGNMENT 0 YS2-2i14.q1k vc_2 421 245 2106 2105 C 177 0.00 1349 reject_low 12 ALIGNMENT 0 YS2-2i14.q1k vc_4 152 202 5830 5829 F 51 0.00 1349 reject_low 8 ALIGNMENT 0 YS2-2i14.q1k vc_5 421 245 5026 5025 C 177 0.00 1349 reject_low 14 ALIGNMENT 42 YS2-2i14.q1k vc_1 244 203 2472 2513 C 42 100.00 1349 reject_low 11 ALIGNMENT 0 YS2-2i14.q1k vc_4 245 244 5872 6353 F 0 0.00 1349 reject_low 8 ALIGNMENT 0 YS2-2i14.q1k vc_5 152 243 2398 2397 F 92 0.00 1349 reject_vc 1 ALIGNMENT 61 YS2-2i14.q1k chr06 203 117 64230 64312 C 87 94.25 1349 reject_low 6 ALIGNMENT 0 YS2-2i14.q1k vc_3 152 243 2531 2530 F 92 0.00 1349 reject_vc 5 ALIGNMENT 0 YS2-2i14.q1k vc_2 202 152 2147 2146 C 51 0.00 1349 reject_low 12 ALIGNMENT 0 YS2-2i14.q1k vc_3 202 152 2514 2513 C 51 0.00 1349 reject_low 13 ALIGNMENT 47 YS2-2i14.q1k vc_7 455 404 6360 6411 C 52 98.08 1349|1,0 reject_low 9 ALIGNMENT 0 YS2-2i14.q1k vc_7 243 152 2728 2727 C 92 0.00 1349 reject_vc 0 ALIGNMENT 362 YS2-2i14.q1k vc_1 244 708 2531 2990 F 465 93.76 1349 reject_vc 3 ALIGNMENT 159 YS2-2i14.q1k vc_4 244 405 6353 6514 F 162 100.00 1349|1,0 reject_low 8 ALIGNMENT 38 YS2-2i14.q1k vc_7 207 244 63 100 F 38 100.00 1349 reject_low 15 ALIGNMENT 87 YS2-2i14.q1k vc_4 332 244 1446 1534 C 89 100.00 1349 reject_low 10 ALIGNMENT 0 YS2-2i14.q1k vc_5 205 152 37 36 C 54 0.00 1349 reject_low 17 ALIGNMENT 0 YS2-2i14.q1k chr06 421 204 64231 64230 C 218 0.00 1349 reject_low 6 ALIGNMENT 0 YS2-2i14.q1k vc_1 202 152 2514 2513 C 51 0.00 1349 reject_low 11 ALIGNMENT 371 YS2-2i14.q1k vc_5 244 752 2398 2899 F 509 92.34 1349 reject_vc 1 ALIGNMENT 0 YS2-2i14.q1k vc_7 245 421 13562 13561 F 177 0.00 1349 reject_low 16 ALIGNMENT 42 YS2-2i14.q1k vc_3 244 203 2472 2513 C 42 100.00 1349 reject_low 13 ALIGNMENT 0 YS2-2i14.q1k vc_5 205 152 5064 5063 C 54 0.00 1349 reject_low 14 ALIGNMENT 365 YS2-2i14.q1k vc_4 752 244 5309 5812 C 509 91.94 1349 reject_vc 2 ALIGNMENT 0 YS2-2i14.q1k vc_7 152 206 63 62 F 55 0.00 1349 reject_low 15 ALIGNMENT 0 YS2-2i14.q1k vc_3 421 245 2473 2472 C 177 0.00 1349 reject_low 13 ALIGNMENT 372 YS2-2i14.q1k vc_7 752 244 2226 2727 C 509 92.34 1349 reject_vc 0 ALIGNMENT 0 YS2-2i14.q1k vc_4 406 421 287 286 F 16 0.00 1349 reject_low 7 ALIGNMENT 0 YS2-2i14.q1k vc_4 243 152 5813 5812 C 92 0.00 1349 reject_vc 2 ALIGNMENT 0 YS2-2i14.q1k vc_7 403 152 6412 6411 C 252 0.00 1349 reject_low 9 ALIGNMENT 154 YS2-2i14.q1k vc_7 708 454 4923 5172 C 255 88.63 1349|0,1 reject_low 9 ALIGNMENT 0 YS2-2i14.q1k vc_7 152 206 13525 13524 F 55 0.00 1349 reject_low 16 ALIGNMENT 0 YS2-2i14.q1k vc_4 243 152 1535 1534 C 92 0.00 1349 reject_low 10 ALIGNMENT 362 YS2-2i14.q1k vc_3 244 708 2531 2990 F 465 93.76 1349 reject_vc 5 ALIGNMENT 0 YS2-2i14.q1k vc_5 421 242 2 1 C 180 0.00 1349 reject_low 17 ALIGNMENT 159 YS2-2i14.q1k vc_4 244 405 126 287 F 162 100.00 1349 reject_low 7 ALIGNMENT 39 YS2-2i14.q1k vc_5 244 206 5025 5063 C 39 100.00 1349 reject_low 14 ALIGNMENT 0 YS2-2i14.q1k vc_2 152 243 2164 2163 F 92 0.00 1349 reject_vc 4 ALIGNMENT 42 YS2-2i14.q1k vc_4 203 244 5830 5871 F 42 100.00 1349 reject_low 8 ALIGNMENT 362 YS2-2i14.q1k vc_2 244 708 2164 2623 F 465 93.76 1349 reject_vc 4 ALIGNMENT 38 YS2-2i14.q1k vc_7 207 244 13525 13562 F 38 100.00 1349 reject_low 16 ALIGNMENT 36 YS2-2i14.q1k vc_5 241 206 1 36 C 36 100.00 1349 reject_low 17 ALIGNMENT 0 YS2-2i14.q1k vc_1 152 243 2531 2530 F 92 0.00 1349 reject_vc 3 ALIGNMENT 0 YS2-2i14.q1k vc_7 454 455 5172 6360 C 0 0.00 1349 reject_low 9 ALIGNMENT 653 YS2-2i15.q1k chr16 3 772 145299 146067 F 770 96.49 1236 accept 0 ALIGNMENT 995 YS2-2i15.p1k chr16 1149 29 145662 146787 C 1121 97.77 1313 accept 0 ALIGNMENT 107 YS2-2i16.q1k chr12 365 483 485696 485814 F 119 96.64 1354 reject_low 6 ALIGNMENT 969 YS2-2i16.p1k chr12 1103 29 453520 454610 C 1075 97.58 1294 reject_low 1 ALIGNMENT 107 YS2-2i16.q1k chr12 365 483 472464 472582 F 119 96.64 1354 reject_low 4 ALIGNMENT 0 YS2-2i16.q1k chr12 77 364 472464 472463 F 288 0.00 1354 reject_low 4 ALIGNMENT 0 YS2-2i16.q1k chr12 77 364 482044 482043 F 288 0.00 1354 reject_low 5 ALIGNMENT 969 YS2-2i16.p1k chr12 1103 29 462657 463747 C 1075 97.58 1294 accept 0 ALIGNMENT 59 YS2-2i16.q1k chr06 105 40 31622 31687 C 66 98.48 1354 reject_low 7 ALIGNMENT 410 YS2-2i16.q1k chr12 40 483 468487 468930 F 444 98.42 1354 reject_low 2 ALIGNMENT 107 YS2-2i16.q1k chr12 365 483 482044 482162 F 119 96.64 1354 reject_low 5 ALIGNMENT 495 YS2-2i16.q1k chr12 40 742 459350 460064 F 703 91.89 1354 accept 0 ALIGNMENT 114 YS2-2i16.q1k chr12 365 493 489348 489476 F 129 96.12 1354 reject_low 3 ALIGNMENT 0 YS2-2i16.q1k chr06 357 106 31623 31622 C 252 0.00 1354 reject_low 7 ALIGNMENT 0 YS2-2i16.q1k chr12 77 364 489348 489347 F 288 0.00 1354 reject_low 3 ALIGNMENT 0 YS2-2i16.q1k chr12 77 364 485696 485695 F 288 0.00 1354 reject_low 6 ALIGNMENT 977 YS2-2i17.p1k chr10 28 1209 52800 53994 F 1182 95.85 1299 accept 0 ALIGNMENT 605 YS2-2i18.q1k chr15 39 802 578210 578967 F 764 94.37 1395 accept 0 ALIGNMENT 871 YS2-2i18.p1k chr15 1117 31 581848 582939 C 1087 94.48 1204 accept 0 ALIGNMENT 1029 YS2-2i19.p1k chr15 28 1276 775683 776930 F 1249 95.12 1330 accept 0 ALIGNMENT 566 YS2-2i19.q1k chr15 781 46 776799 777526 C 736 93.48 1393 accept 0 ALIGNMENT 661 YS2-2i20.q1k chr14 822 41 476274 477050 C 782 96.68 1375 accept 0 ALIGNMENT 1019 YS2-2i20.p1k chr14 34 1228 475650 476851 F 1195 96.23 1320 accept 0 ALIGNMENT 587 YS2-2i21.q1k chr16 62 745 166405 167087 F 684 96.05 1405 accept 0 ALIGNMENT 1060 YS2-2i21.p1k chr16 1214 29 167952 169139 C 1186 97.55 1264 accept 0 ALIGNMENT 0 YS2-2i22.p1k chr07 434 417 932155 932154 C 18 0.00 434 accept 0 ALIGNMENT 353 YS2-2i22.p1k chr07 416 29 932154 932542 C 388 98.97 434 accept 0 ALIGNMENT 611 YS2-2i23.q1k chr12 82 862 462196 462962 F 781 94.24 1308 accept 1 ALIGNMENT 980 YS2-2i23.p1k chr12 1197 30 466567 467745 C 1168 95.38 1197 accept 1 ALIGNMENT 611 YS2-2i23.q1k chr12 82 862 453059 453825 F 781 94.24 1308 accept 0 ALIGNMENT 980 YS2-2i23.p1k chr12 1197 30 457430 458608 C 1168 95.38 1197 accept 0 ALIGNMENT 245 YS2-2i24.q1k vc_1 1 309 2689 2993 F 309 94.17 932 reject_low 3 ALIGNMENT 245 YS2-2i24.q1k vc_3 1 309 2689 2993 F 309 94.17 932 reject_low 5 ALIGNMENT 274 YS2-2i24.q1k vc_4 423 1 5236 5654 C 423 89.60 932 reject_low 2 ALIGNMENT 0 YS2-2i24.q1k vc_7 53 54 5172 6360 C 0 0.00 932 reject_low 6 ALIGNMENT 289 YS2-2i24.q1k vc_7 440 1 2136 2569 C 440 89.77 932 reject_vc 1 ALIGNMENT 245 YS2-2i24.q1k vc_2 1 309 2322 2626 F 309 94.17 932 reject_low 4 ALIGNMENT 192 YS2-2i24.q1k vc_7 307 53 4922 5172 C 255 92.94 932|0,1 reject_low 6 ALIGNMENT 39 YS2-2i24.q1k vc_4 307 240 47 112 C 68 88.24 932 reject_low 7 ALIGNMENT 289 YS2-2i24.q1k vc_5 1 440 2556 2989 F 440 89.77 932 reject_vc 0 ALIGNMENT 48 YS2-2i24.q1k vc_7 54 3 6360 6411 C 52 98.08 932|1,0 reject_low 6 ALIGNMENT 39 YS2-2i24.q1k vc_4 307 240 6274 6339 C 68 88.24 932 reject_low 9 ALIGNMENT 39 YS2-2i24.q1k vc_4 240 307 1548 1613 F 68 88.24 932 reject_low 8 ALIGNMENT 287 YS2-2j02.p1k chr11 323 22 283847 284150 C 302 99.01 342 manual 0 ALIGNMENT 167 YS2-2j02.q1k vc_7 304 53 4924 5172 C 252 90.48 750|0,1 reject_vc 8 ALIGNMENT 149 YS2-2j02.p1k chr16 328 66 465387 465649 C 263 85.93 342 manual 1 ALIGNMENT 51 YS2-2j02.q1k vc_7 54 3 6360 6411 C 52 100.00 750|1,0 reject_vc 8 ALIGNMENT 227 YS2-2j02.q1k vc_4 371 1 5289 5654 C 371 89.22 750 reject_vc 4 ALIGNMENT 0 YS2-2j02.p1k chr11 342 324 283848 283847 C 19 0.00 342 manual 0 ALIGNMENT 222 YS2-2j02.q1k vc_3 1 304 2689 2989 F 304 92.43 750 reject_vc 7 ALIGNMENT 33 YS2-2j02.q1k vc_4 304 241 6276 6337 C 64 87.50 750 reject_vc 11 ALIGNMENT 222 YS2-2j02.q1k vc_1 1 304 2689 2989 F 304 92.43 750 reject_vc 5 ALIGNMENT 33 YS2-2j02.q1k vc_4 241 304 1550 1611 F 64 87.50 750 reject_vc 10 ALIGNMENT 0 YS2-2j02.q1k vc_7 53 54 5172 6360 C 0 0.00 750 reject_vc 8 ALIGNMENT 222 YS2-2j02.q1k vc_2 1 304 2322 2622 F 304 92.43 750 reject_vc 6 ALIGNMENT 234 YS2-2j02.q1k vc_7 371 1 2206 2569 C 371 89.76 750 reject_vc 3 ALIGNMENT 33 YS2-2j02.q1k vc_4 304 241 49 110 C 64 87.50 750 reject_vc 9 ALIGNMENT 234 YS2-2j02.q1k vc_5 1 371 2556 2919 F 371 89.76 750 reject_vc 2 ALIGNMENT 23 YS2-2j03.p1k chr15 336 306 30952 30982 C 31 93.55 1290 reject_low 8 ALIGNMENT 0 YS2-2j03.p1k chr15 528 62 31300 31299 C 467 0.00 1290 reject_low 5 ALIGNMENT 23 YS2-2j03.p1k chr15 403 372 30876 30907 C 32 90.62 1290 reject_low 8 ALIGNMENT 34 YS2-2j03.q1k chr12 47 240 290724 290917 F 194 72.68 1329 reject_low 7 ALIGNMENT 71 YS2-2j03.p1k chr15 641 532 31148 31257 C 110 89.09 1290 reject_low 4 ALIGNMENT 0 YS2-2j03.p1k chr15 548 62 31319 31318 C 487 0.00 1290 reject_low 6 ALIGNMENT 0 YS2-2j03.q1k chr12 241 643 290917 290916 F 403 0.00 1329 reject_low 7 ALIGNMENT 0 YS2-2j03.p1k chr15 826 404 30877 30876 C 423 0.00 1290 reject_low 8 ALIGNMENT 0 YS2-2j03.p1k chr15 531 62 31258 31257 C 470 0.00 1290 reject_low 4 ALIGNMENT 58 YS2-2j03.p1k chr09 908 747 25194 25354 C 162 80.86 1290 reject_low 1 ALIGNMENT 0 YS2-2j03.p1k chr15 426 62 31300 31299 C 365 0.00 1290 reject_low 3 ALIGNMENT 540 YS2-2j03.p1k chr15 1149 36 30370 31586 C 1114 84.74 1290 accept 0 ALIGNMENT 43 YS2-2j03.p1k chr09 221 42 25898 26080 C 180 75.56 1290 reject_low 1 ALIGNMENT 702 YS2-2j03.q1k chr10 25 897 19955 20829 F 873 93.70 1329 reject_low 2 ALIGNMENT 680 YS2-2j03.q1k chr09 25 877 19975 20828 F 853 93.43 1329 reject_low 1 ALIGNMENT 0 YS2-2j03.p1k chr15 826 642 31149 31148 C 185 0.00 1290 reject_low 4 ALIGNMENT 0 YS2-2j03.p1k chr15 826 639 31191 31190 C 188 0.00 1290 reject_low 5 ALIGNMENT 63 YS2-2j03.p1k chr15 638 529 31190 31299 C 110 86.36 1290 reject_low 5 ALIGNMENT 0 YS2-2j03.p1k chr15 826 640 31088 31087 C 187 0.00 1290 reject_low 3 ALIGNMENT 0 YS2-2j03.p1k chr15 305 62 30983 30982 C 244 0.00 1290 reject_low 8 ALIGNMENT 84 YS2-2j03.p1k chr15 639 427 31087 31299 C 213 81.69 1290 reject_low 3 ALIGNMENT 0 YS2-2j03.p1k chr15 826 640 31229 31228 C 187 0.00 1290 reject_low 6 ALIGNMENT 0 YS2-2j03.p1k chr09 746 222 25355 25897 C 525 0.00 1290 reject_low 1 ALIGNMENT 0 YS2-2j03.p1k chr15 371 337 30908 30951 C 35 0.00 1290 reject_low 8 ALIGNMENT 56 YS2-2j03.p1k chr15 639 549 31228 31318 C 91 87.91 1290 reject_low 6 ALIGNMENT 735 YS2-2j03.q1k chr15 25 897 25730 26604 F 873 94.96 1329 accept 0 ALIGNMENT 653 YS2-2j04.q1k chr12 13 677 453155 453819 F 665 99.70 1221 accept 0 ALIGNMENT 0 YS2-2j04.q1k vc_4 62 717 126 125 F 656 0.00 1221 reject_low 9 ALIGNMENT 703 YS2-2j04.p1k chr12 741 32 453110 453819 C 710 100.00 759 reject_low 1 ALIGNMENT 0 YS2-2j04.p1k chr12 759 742 462248 462247 C 18 0.00 759 accept 0 ALIGNMENT 0 YS2-2j04.q1k vc_7 717 62 2728 2727 C 656 0.00 1221 reject_low 7 ALIGNMENT 33 YS2-2j04.q1k vc_5 715 680 1 36 C 36 97.22 1221 reject_low 17 ALIGNMENT 86 YS2-2j04.q1k vc_4 718 857 6353 6491 F 140 88.57 1221|1,0 reject_low 11 ALIGNMENT 94 YS2-2j04.q1k vc_5 718 929 2398 2612 F 212 83.49 1221 reject_low 6 ALIGNMENT 703 YS2-2j04.p1k chr12 741 32 462247 462956 C 710 100.00 759 accept 0 ALIGNMENT 0 YS2-2j04.p1k chr12 759 742 453111 453110 C 18 0.00 759 reject_low 1 ALIGNMENT 38 YS2-2j04.q1k vc_1 718 678 2472 2512 C 41 97.56 1221 reject_low 12 ALIGNMENT 0 YS2-2j04.q1k vc_5 679 62 37 36 C 618 0.00 1221 reject_low 17 ALIGNMENT 94 YS2-2j04.q1k vc_2 718 929 2164 2378 F 212 83.49 1221 reject_low 4 ALIGNMENT 0 YS2-2j04.q1k vc_7 62 680 13525 13524 F 619 0.00 1221 reject_low 16 ALIGNMENT 94 YS2-2j04.q1k vc_1 718 929 2531 2745 F 212 83.49 1221 reject_low 3 ALIGNMENT 0 YS2-2j04.q1k vc_4 717 62 1535 1534 C 656 0.00 1221 reject_low 10 ALIGNMENT 38 YS2-2j04.q1k vc_3 718 678 2472 2512 C 41 97.56 1221 reject_low 14 ALIGNMENT 0 YS2-2j04.q1k vc_1 62 717 2531 2530 F 656 0.00 1221 reject_low 3 ALIGNMENT 0 YS2-2j04.q1k vc_1 677 62 2513 2512 C 616 0.00 1221 reject_low 12 ALIGNMENT 0 YS2-2j04.q1k vc_3 62 717 2531 2530 F 656 0.00 1221 reject_low 5 ALIGNMENT 0 YS2-2j04.q1k vc_5 679 62 5064 5063 C 618 0.00 1221 reject_low 15 ALIGNMENT 0 YS2-2j04.q1k vc_4 719 718 5872 6353 F 0 0.00 1221 reject_low 11 ALIGNMENT 0 YS2-2j04.q1k vc_3 677 62 2513 2512 C 616 0.00 1221 reject_low 14 ALIGNMENT 653 YS2-2j04.q1k chr12 13 677 462292 462956 F 665 99.70 1221 reject_low 2 ALIGNMENT 67 YS2-2j04.q1k vc_4 804 718 1450 1534 C 87 94.25 1221 reject_low 10 ALIGNMENT 86 YS2-2j04.q1k vc_4 718 857 126 264 F 140 88.57 1221 reject_low 9 ALIGNMENT 0 YS2-2j04.q1k vc_2 677 62 2146 2145 C 616 0.00 1221 reject_low 13 ALIGNMENT 38 YS2-2j04.q1k vc_4 678 718 5831 5871 F 41 97.56 1221 reject_low 11 ALIGNMENT 92 YS2-2j04.q1k vc_4 927 718 5600 5812 C 210 83.33 1221 reject_low 8 ALIGNMENT 0 YS2-2j04.q1k vc_2 62 717 2164 2163 F 656 0.00 1221 reject_low 4 ALIGNMENT 0 YS2-2j04.q1k vc_4 717 62 5813 5812 C 656 0.00 1221 reject_low 8 ALIGNMENT 35 YS2-2j04.q1k vc_7 681 718 13525 13562 F 38 97.37 1221 reject_low 16 ALIGNMENT 0 YS2-2j04.q1k vc_5 62 717 2398 2397 F 656 0.00 1221 reject_low 6 ALIGNMENT 0 YS2-2j04.q1k vc_4 62 677 5831 5830 F 616 0.00 1221 reject_low 11 ALIGNMENT 94 YS2-2j04.q1k vc_3 718 929 2531 2745 F 212 83.49 1221 reject_low 5 ALIGNMENT 36 YS2-2j04.q1k vc_5 718 680 5025 5063 C 39 97.44 1221 reject_low 15 ALIGNMENT 38 YS2-2j04.q1k vc_2 718 678 2105 2145 C 41 97.56 1221 reject_low 13 ALIGNMENT 94 YS2-2j04.q1k vc_7 929 718 2513 2727 C 212 83.49 1221 reject_low 7 ALIGNMENT 0 YS2-2j05.p1k chr04 477 460 1471769 1471768 C 18 0.00 477 accept 0 ALIGNMENT 404 YS2-2j05.p1k chr04 459 27 1471768 1472202 C 433 98.85 477 accept 0 ALIGNMENT 955 YS2-2j06.p1k chr10 1166 36 470840 471981 C 1131 96.11 1281 accept 0 ALIGNMENT 609 YS2-2j06.q1k chr10 11 759 467918 468655 F 749 94.93 1249 accept 0 ALIGNMENT 692 YS2-2j08.q1k chr14 922 47 710122 710987 C 876 94.52 1393 accept 0 ALIGNMENT 909 YS2-2j08.p1k chr14 29 1149 706310 707438 F 1121 94.11 1271 accept 0 ALIGNMENT 54 YS2-2j09.q1k vc_2 618 755 2165 2296 F 138 84.06 1269 reject_low 2 ALIGNMENT 0 YS2-2j09.q1k vc_2 62 617 2165 2164 F 556 0.00 1269 reject_low 2 ALIGNMENT 514 YS2-2j09.q1k chr05 1 573 268200 268767 F 573 98.08 1269 accept_chi 1 ALIGNMENT 570 YS2-2j09.p1k chr05 653 29 268150 268769 C 625 98.56 671 accept_chi 0 ALIGNMENT 0 YS2-2j09.p1k chr05 671 654 268151 268150 C 18 0.00 671 accept_chi 0 ALIGNMENT 0 YS2-2j10.p1k chr05 674 657 268151 268150 C 18 0.00 674 accept 0 ALIGNMENT 567 YS2-2j10.p1k chr05 656 32 268150 268769 C 625 98.40 674 accept 0 ALIGNMENT 661 YS2-2j12.q1k chr12 44 875 16214 17031 F 832 95.07 1499 accept 0 ALIGNMENT 933 YS2-2j12.p1k chr12 1184 34 18918 20079 C 1151 94.79 1309 accept 0 ALIGNMENT 982 YS2-2j13.p1k chr04 1156 33 70141 71269 C 1124 96.80 1318 accept 0 ALIGNMENT 613 YS2-2j13.q1k chr04 2 768 68730 69487 F 767 94.65 1231 accept 0 ALIGNMENT 974 YS2-2j14.p1k chr11 36 1222 470466 471650 F 1187 95.28 1339 accept 0 ALIGNMENT 652 YS2-2j14.q1k chr11 905 45 474054 474911 C 861 92.80 1318 accept 0 ALIGNMENT 320 YS2-2j15.p1k vc_7 1 483 13918 14406 F 483 89.44 586 reject_low 6 ALIGNMENT 326 YS2-2j15.p1k vc_1 483 1 1261 1749 C 483 89.65 586 reject_low 2 ALIGNMENT 327 YS2-2j15.p1k vc_6 1 535 3712 4258 F 535 88.04 586 reject_vc 1 ALIGNMENT 327 YS2-2j15.p1k vc_5 535 1 4123 4669 C 535 88.60 586 reject_vc 0 ALIGNMENT 320 YS2-2j15.p1k vc_7 1 483 456 944 F 483 89.44 586 reject_low 5 ALIGNMENT 326 YS2-2j15.p1k vc_2 483 1 1261 1749 C 483 89.65 586 reject_low 3 ALIGNMENT 326 YS2-2j15.p1k vc_3 483 1 1261 1749 C 483 89.65 586 reject_low 4 ALIGNMENT 932 YS2-2j16.p1k chr15 30 1089 1013763 1014834 F 1060 97.08 1269 accept 0 ALIGNMENT 740 YS2-2j16.q1k chr15 874 1 1014762 1015624 C 874 96.80 1250 accept 0 ALIGNMENT 727 YS2-2j18.p1k chr07 31 863 893129 893973 F 833 96.64 1122 accept 0 ALIGNMENT 681 YS2-2j18.q1k chr07 808 1 894482 895280 C 808 96.04 1269 accept 0 ALIGNMENT 586 YS2-2j20.q1k chr16 2 837 185465 186296 F 836 91.03 1182 accept 0 ALIGNMENT 863 YS2-2j20.p1k chr16 1009 28 188999 189990 C 982 97.05 1214 accept 0 ALIGNMENT 0 YS2-2j21.p1k chr06 91 62 31730 31729 C 30 0.00 402 reject_low 7 ALIGNMENT 327 YS2-2j21.p1k chr12 30 383 459246 459599 F 354 99.44 402 accept 0 ALIGNMENT 117 YS2-2j21.q1k vc_7 301 1 2269 2566 C 301 80.40 656 reject_vc 5 ALIGNMENT 0 YS2-2j21.p1k chr06 402 200 31623 31622 C 203 0.00 402 reject_low 7 ALIGNMENT 110 YS2-2j21.q1k vc_4 301 1 5352 5651 C 301 79.73 656 reject_vc 6 ALIGNMENT 0 YS2-2j21.p1k chr12 384 402 468736 468735 F 19 0.00 402 accept 1 ALIGNMENT 327 YS2-2j21.p1k chr12 30 383 468383 468736 F 354 99.44 402 accept 1 ALIGNMENT 94 YS2-2j21.p1k chr06 199 92 31622 31729 C 108 98.15 402 reject_low 7 ALIGNMENT 0 YS2-2j21.p1k chr12 384 402 459599 459598 F 19 0.00 402 accept 0 ALIGNMENT 117 YS2-2j21.q1k vc_5 1 301 2559 2856 F 301 80.40 656 reject_vc 4 ALIGNMENT 117 YS2-2j21.q1k vc_1 1 301 2692 2989 F 301 80.40 656 reject_vc 2 ALIGNMENT 117 YS2-2j21.q1k vc_3 1 301 2692 2989 F 301 80.40 656 reject_vc 3 ALIGNMENT 237 YS2-2j22.p1k chr11 283 28 218100 218356 C 256 99.61 300 accept 0 ALIGNMENT 0 YS2-2j22.p1k chr11 300 284 218101 218100 C 17 0.00 300 accept 0 ALIGNMENT 170 YS2-2j24.p1k chr15 30 214 101518 101702 F 185 99.46 232 accept 0 ALIGNMENT 0 YS2-2j24.p1k chr15 215 232 101702 101701 F 18 0.00 232 accept 0 ALIGNMENT 708 YS2-2k01.q1k chr11 28 883 556964 557817 F 856 95.68 1290 accept 0 ALIGNMENT 818 YS2-2k01.p1k chr11 1075 33 560363 561422 C 1043 94.73 1198 accept 0 ALIGNMENT 758 YS2-2k02.q1k chr13 4 917 501721 502625 F 914 95.51 1315 accept 0 ALIGNMENT 564 YS2-2k02.p1k chr13 626 27 505018 505618 C 600 99.50 626 accept 0 ALIGNMENT 767 YS2-2k04.q1k chr04 31 980 251656 252594 F 950 94.95 1341 accept 0 ALIGNMENT 944 YS2-2k04.p1k chr04 1192 32 254677 255845 C 1161 95.00 1305 accept 0 ALIGNMENT 698 YS2-2k05.q1k chr02 903 32 619538 620401 C 872 94.72 1311 accept 0 ALIGNMENT 922 YS2-2k05.p1k chr02 29 1111 617328 618420 F 1083 96.58 1249 accept 0 ALIGNMENT 997 YS2-2k08.p1k chr14 31 1195 360630 361796 F 1165 96.82 1326 accept 0 ALIGNMENT 802 YS2-2k08.q1k chr14 992 33 365034 365986 C 960 95.62 1404 accept 0 ALIGNMENT 678 YS2-2k09.q1k chr14 850 28 415455 416273 C 823 95.63 1355 accept 0 ALIGNMENT 878 YS2-2k09.p1k chr14 36 1100 415069 416149 F 1065 96.34 1292 accept 0 ALIGNMENT 0 YS2-2k10.q1k vc_4 62 558 136 135 F 497 0.00 1401 reject_low 7 ALIGNMENT 38 YS2-2k10.q1k vc_4 507 547 5830 5870 F 41 97.56 1401 reject_low 11 ALIGNMENT 81 YS2-2k10.q1k vc_1 559 771 2541 2745 F 213 82.16 1401 reject_low 2 ALIGNMENT 0 YS2-2k10.q1k vc_4 548 558 5871 6362 F 11 0.00 1401 reject_low 11 ALIGNMENT 67 YS2-2k10.q1k vc_4 559 690 6363 6491 F 132 85.61 1401 reject_low 11 ALIGNMENT 67 YS2-2k10.q1k vc_4 559 690 136 264 F 132 85.61 1401 reject_low 7 ALIGNMENT 78 YS2-2k10.q1k vc_4 769 559 5600 5802 C 211 81.99 1401 reject_low 6 ALIGNMENT 34 YS2-2k10.q1k vc_7 511 547 13525 13561 F 37 97.30 1401 reject_low 13 ALIGNMENT 445 YS2-2k10.p1k chr16 27 488 67088 67550 F 462 99.35 506 accept_chi 0 ALIGNMENT 0 YS2-2k10.q1k vc_1 62 558 2541 2540 F 497 0.00 1401 reject_low 2 ALIGNMENT 81 YS2-2k10.q1k vc_5 559 771 2408 2612 F 213 82.16 1401 reject_low 4 ALIGNMENT 0 YS2-2k10.q1k vc_5 509 62 5064 5063 C 448 0.00 1401 reject_low 12 ALIGNMENT 0 YS2-2k10.q1k vc_4 558 62 1525 1524 C 497 0.00 1401 reject_low 8 ALIGNMENT 81 YS2-2k10.q1k vc_7 771 559 2513 2717 C 213 82.16 1401 reject_low 5 ALIGNMENT 33 YS2-2k10.q1k vc_5 545 510 1 36 C 36 97.22 1401 reject_low 14 ALIGNMENT 0 YS2-2k10.q1k vc_5 509 62 37 36 C 448 0.00 1401 reject_low 14 ALIGNMENT 0 YS2-2k10.q1k vc_4 558 62 5803 5802 C 497 0.00 1401 reject_low 6 ALIGNMENT 38 YS2-2k10.q1k vc_1 547 507 2473 2513 C 41 97.56 1401 reject_low 9 ALIGNMENT 0 YS2-2k10.p1k chr16 489 506 67550 67549 F 18 0.00 506 accept_chi 0 ALIGNMENT 0 YS2-2k10.q1k vc_3 62 558 2541 2540 F 497 0.00 1401 reject_low 3 ALIGNMENT 38 YS2-2k10.q1k vc_3 547 507 2473 2513 C 41 97.56 1401 reject_low 10 ALIGNMENT 81 YS2-2k10.q1k vc_3 559 771 2541 2745 F 213 82.16 1401 reject_low 3 ALIGNMENT 0 YS2-2k10.q1k vc_5 62 558 2408 2407 F 497 0.00 1401 reject_low 4 ALIGNMENT 0 YS2-2k10.q1k vc_1 506 62 2514 2513 C 445 0.00 1401 reject_low 9 ALIGNMENT 56 YS2-2k10.q1k vc_4 636 559 1447 1524 C 78 91.03 1401 reject_low 8 ALIGNMENT 0 YS2-2k10.q1k vc_7 62 510 13525 13524 F 449 0.00 1401 reject_low 13 ALIGNMENT 35 YS2-2k10.q1k vc_5 547 510 5026 5063 C 38 97.37 1401 reject_low 12 ALIGNMENT 0 YS2-2k10.q1k vc_3 506 62 2514 2513 C 445 0.00 1401 reject_low 10 ALIGNMENT 436 YS2-2k10.q1k chr16 508 50 67088 67546 C 459 98.91 1401 accept_chi 1 ALIGNMENT 0 YS2-2k10.q1k vc_7 558 62 2718 2717 C 497 0.00 1401 reject_low 5 ALIGNMENT 0 YS2-2k10.q1k vc_4 62 506 5830 5829 F 445 0.00 1401 reject_low 11 ALIGNMENT 705 YS2-2k11.q1k chr10 924 31 674067 674951 C 894 95.30 1299 accept 0 ALIGNMENT 960 YS2-2k11.p1k chr10 36 1170 669212 670346 F 1135 95.86 1332 accept 0 ALIGNMENT 860 YS2-2k12.q1k chr01 1028 29 86618 87614 C 1000 96.20 1283 accept 0 ALIGNMENT 832 YS2-2k12.p1k chr01 29 982 82580 83548 F 954 96.86 1315 accept 0 ALIGNMENT 710 YS2-2k13.q1k chr12 915 32 1035859 1036731 C 884 95.14 1290 accept 0 ALIGNMENT 941 YS2-2k13.p1k chr12 41 1199 1032383 1033538 F 1159 95.17 1329 accept 0 ALIGNMENT 421 YS2-2k14.p1k chr07 713 170 305707 306243 C 544 93.57 1059 accept 0 ALIGNMENT 796 YS2-2k14.q1k chr07 25 992 300964 301940 F 968 95.35 1246 accept 0 ALIGNMENT 354 YS2-2k15.p1k chr05 706 30 24272 24946 C 677 85.08 1342 accept 0 ALIGNMENT 0 YS2-2k16.q1k chr12 149 508 459877 459876 F 360 0.00 1300 reject_low 1 ALIGNMENT 0 YS2-2k16.p1k chrm 860 504 44862 44861 C 357 0.00 1306 reject_low 11 ALIGNMENT 56 YS2-2k16.p1k chrm 62 310 56424 56672 F 249 85.14 1306 reject_low 9 ALIGNMENT 0 YS2-2k16.p1k chrm 505 860 56898 56897 F 356 0.00 1306 reject_low 9 ALIGNMENT 0 YS2-2k16.p1k chrm 860 442 82328 82327 C 419 0.00 1306 reject_low 7 ALIGNMENT 0 YS2-2k16.q1k chr12 74 508 482162 482161 F 435 0.00 1300 reject_low 5 ALIGNMENT 0 YS2-2k16.q1k chr12 74 508 468930 468929 F 435 0.00 1300 reject_low 3 ALIGNMENT 0 YS2-2k16.q1k chr12 74 508 472582 472581 F 435 0.00 1300 reject_low 4 ALIGNMENT 38 YS2-2k16.p1k chrm 310 97 45084 45294 C 214 82.71 1306 reject_low 11 ALIGNMENT 83 YS2-2k16.p1k chrm 438 174 32232 32496 C 265 83.77 1306 reject_low 10 ALIGNMENT 0 YS2-2k16.p1k chrm 310 311 45056 45083 C 0 0.00 1306 reject_low 11 ALIGNMENT 0 YS2-2k16.q1k chrm 190 62 13631 13630 C 129 0.00 1300 accept 0 ALIGNMENT 116 YS2-2k16.p1k chrm 503 311 44861 45055 C 193 90.67 1306 reject_low 11 ALIGNMENT 72 YS2-2k16.q1k chr12 1 73 468858 468930 F 73 100.00 1300 reject_low 3 ALIGNMENT 72 YS2-2k16.q1k chr12 1 73 472510 472582 F 73 100.00 1300 reject_low 4 ALIGNMENT 274 YS2-2k16.q1k chrm 678 191 13141 13630 C 488 95.90 1300 accept 0 ALIGNMENT 0 YS2-2k16.p1k chrm 860 439 32233 32232 C 422 0.00 1306 reject_low 10 ALIGNMENT 98 YS2-2k16.p1k chrm 503 314 30155 30344 C 190 87.89 1306 reject_low 8 ALIGNMENT 0 YS2-2k16.p1k chrm 96 62 45295 45294 C 35 0.00 1306 reject_low 11 ALIGNMENT 0 YS2-2k16.q1k chr12 74 508 485814 485813 F 435 0.00 1300 reject_low 6 ALIGNMENT 0 YS2-2k16.p1k chrm 173 62 32497 32496 C 112 0.00 1306 reject_low 10 ALIGNMENT 0 YS2-2k16.p1k chrm 311 311 56673 56702 F 1 0.00 1306 reject_low 9 ALIGNMENT 72 YS2-2k16.q1k chr12 1 73 482090 482162 F 73 100.00 1300 reject_low 5 ALIGNMENT 81 YS2-2k16.q1k chr12 1 88 489394 489481 F 88 97.73 1300 reject_low 2 ALIGNMENT 0 YS2-2k16.q1k chr12 89 508 489481 489480 F 420 0.00 1300 reject_low 2 ALIGNMENT 100 YS2-2k16.p1k chrm 441 61 82327 82704 C 381 84.51 1306 reject_low 7 ALIGNMENT 110 YS2-2k16.q1k chr12 1 148 459721 459877 F 148 92.57 1300 reject_low 1 ALIGNMENT 123 YS2-2k16.p1k chrm 312 504 56703 56898 F 193 91.71 1306 reject_low 9 ALIGNMENT 72 YS2-2k16.q1k chr12 1 73 485742 485814 F 73 100.00 1300 reject_low 6 ALIGNMENT 0 YS2-2k16.p1k chrm 860 504 30156 30155 C 357 0.00 1306 reject_low 8 ALIGNMENT 696 YS2-2k16.p1k chrm 30 1059 12373 13388 F 1030 97.67 1306 accept 0 ALIGNMENT 0 YS2-2k16.p1k chrm 313 62 30345 30344 C 252 0.00 1306 reject_low 8 ALIGNMENT 242 YS2-2k18.p1k chr11 108 482 275932 276293 F 375 90.67 843 accept 0 ALIGNMENT 0 YS2-2k18.q1k chr07 497 483 79002 79001 C 15 0.00 1119 reject_low 1 ALIGNMENT 0 YS2-2k18.q1k chr07 438 62 79045 79044 C 377 0.00 1119 reject_low 1 ALIGNMENT 630 YS2-2k18.q1k chr11 833 1 280221 281054 C 833 93.76 1119 accept 0 ALIGNMENT 23 YS2-2k18.q1k chr07 482 439 79001 79044 C 44 93.18 1119 reject_low 1 ALIGNMENT 145 YS2-2k19.p1k chr10 466 76 735960 736350 C 391 79.28 1146 ambiguous_tel 0 ALIGNMENT 0 YS2-2k19.p1k chr10 651 467 735961 735960 C 185 0.00 1146 ambiguous_tel 0 ALIGNMENT 142 YS2-2k19.p1k chr04 76 466 9365 9755 F 391 78.77 1146 ambiguous_tel 1 ALIGNMENT 0 YS2-2k19.p1k chr04 467 651 9755 9754 F 185 0.00 1146 ambiguous_tel 1 ALIGNMENT 956 YS2-2k20.p1k chr10 32 1185 510623 511790 F 1154 95.15 1281 accept 0 ALIGNMENT 739 YS2-2k20.q1k chr10 898 32 511384 512248 C 867 96.42 1325 accept 0 ALIGNMENT 709 YS2-2k21.q1k chr13 24 896 562594 563460 F 873 95.19 1263 accept 0 ALIGNMENT 995 YS2-2k21.p1k chr13 1174 27 563184 564339 C 1148 96.25 1240 accept 0 ALIGNMENT 187 YS2-2k22.q1k vc_7 303 53 4924 5172 C 251 92.43 699 reject_low 11 ALIGNMENT 0 YS2-2k22.q1k vc_4 237 62 113 112 C 176 0.00 699 reject_low 12 ALIGNMENT 270 YS2-2k22.p1k vc_5 461 1 4231 4669 C 461 88.72 530 reject_vc 0 ALIGNMENT 0 YS2-2k22.q1k vc_4 237 62 6340 6339 C 176 0.00 699 reject_low 14 ALIGNMENT 231 YS2-2k22.q1k vc_4 367 1 5294 5654 C 367 89.37 699 reject_low 7 ALIGNMENT 270 YS2-2k22.p1k vc_2 461 1 1311 1749 C 461 88.72 530 reject_low 3 ALIGNMENT 263 YS2-2k22.p1k vc_7 1 461 13918 14356 F 461 88.72 530 reject_low 6 ALIGNMENT 238 YS2-2k22.q1k vc_7 367 1 2211 2569 C 367 89.92 699 reject_vc 1 ALIGNMENT 36 YS2-2k22.q1k vc_4 303 238 49 112 C 66 87.88 699 reject_low 12 ALIGNMENT 235 YS2-2k22.q1k vc_2 1 303 2322 2622 F 303 93.07 699 reject_low 9 ALIGNMENT 269 YS2-2k22.p1k vc_6 1 461 3712 4150 F 461 89.15 530 reject_low 5 ALIGNMENT 36 YS2-2k22.q1k vc_4 303 238 6276 6339 C 66 87.88 699 reject_low 14 ALIGNMENT 270 YS2-2k22.p1k vc_1 461 1 1311 1749 C 461 88.72 530 reject_low 2 ALIGNMENT 235 YS2-2k22.q1k vc_3 1 303 2689 2989 F 303 93.07 699 reject_low 10 ALIGNMENT 235 YS2-2k22.q1k vc_1 1 303 2689 2989 F 303 93.07 699 reject_low 8 ALIGNMENT 263 YS2-2k22.p1k vc_7 1 461 456 894 F 461 88.72 530 reject_vc 1 ALIGNMENT 36 YS2-2k22.q1k vc_4 238 303 1548 1611 F 66 87.88 699 reject_low 13 ALIGNMENT 238 YS2-2k22.q1k vc_5 1 367 2556 2914 F 367 90.19 699 reject_vc 0 ALIGNMENT 0 YS2-2k22.q1k vc_4 62 237 1548 1547 F 176 0.00 699 reject_low 13 ALIGNMENT 270 YS2-2k22.p1k vc_3 461 1 1311 1749 C 461 88.72 530 reject_low 4 ALIGNMENT 714 YS2-2k24.q1k chr09 884 32 320310 321152 C 853 96.13 1298 accept 0 ALIGNMENT 972 YS2-2k24.p1k chr09 27 1144 318567 319687 F 1118 96.15 1234 accept 0 ALIGNMENT 490 YS2-2l02.p1k vc_6 1 657 3712 4381 F 657 92.69 716 reject_low 2 ALIGNMENT 51 YS2-2l02.q1k vc_4 302 238 48 112 C 65 93.85 873 reject_low 13 ALIGNMENT 283 YS2-2l02.q1k vc_3 1 302 2689 2990 F 302 98.01 873 reject_low 10 ALIGNMENT 0 YS2-2l02.q1k vc_4 62 237 1548 1547 F 176 0.00 873 reject_low 12 ALIGNMENT 405 YS2-2l02.q1k vc_7 547 1 2030 2569 C 547 92.32 873 reject_low 1 ALIGNMENT 0 YS2-2l02.q1k vc_7 53 54 5172 6360 C 0 0.00 873 reject_low 11 ALIGNMENT 0 YS2-2l02.q1k vc_4 303 310 1613 1881 F 8 0.00 873 reject_low 12 ALIGNMENT 359 YS2-2l02.q1k vc_4 422 1 5233 5654 C 422 95.50 873 reject_low 7 ALIGNMENT 0 YS2-2l02.q1k vc_4 237 62 6340 6339 C 176 0.00 873 reject_low 14 ALIGNMENT 0 YS2-2l02.q1k vc_7 304 303 4700 4922 C 2 0.00 873 reject_low 11 ALIGNMENT 491 YS2-2l02.p1k vc_5 657 1 4000 4669 C 657 92.24 716 reject_vc 0 ALIGNMENT 0 YS2-2l02.q1k vc_4 237 62 113 112 C 176 0.00 873 reject_low 13 ALIGNMENT 51 YS2-2l02.q1k vc_4 302 238 6275 6339 C 65 93.85 873 reject_low 14 ALIGNMENT 51 YS2-2l02.q1k vc_4 238 302 1548 1612 F 65 93.85 873 reject_low 12 ALIGNMENT 405 YS2-2l02.q1k vc_5 1 662 2556 3205 F 662 88.37 873 reject_vc 0 ALIGNMENT 51 YS2-2l02.q1k vc_7 54 3 6360 6411 C 52 100.00 873|1,0 reject_low 11 ALIGNMENT 481 YS2-2l02.p1k vc_7 1 657 13918 14587 F 657 92.24 716 reject_low 6 ALIGNMENT 488 YS2-2l02.p1k vc_1 657 1 1080 1749 C 657 92.09 716 reject_low 3 ALIGNMENT 228 YS2-2l02.q1k vc_7 302 53 4923 5172 C 250 97.20 873|0,1 reject_low 11 ALIGNMENT 283 YS2-2l02.q1k vc_2 1 302 2322 2623 F 302 98.01 873 reject_low 9 ALIGNMENT 488 YS2-2l02.p1k vc_3 657 1 1080 1749 C 657 92.09 716 reject_low 5 ALIGNMENT 283 YS2-2l02.q1k vc_1 1 302 2689 2990 F 302 98.01 873 reject_low 8 ALIGNMENT 118 YS2-2l02.q1k vc_4 311 662 1882 2221 F 352 80.40 873 reject_low 12 ALIGNMENT 488 YS2-2l02.p1k vc_2 657 1 1080 1749 C 657 92.09 716 reject_low 4 ALIGNMENT 481 YS2-2l02.p1k vc_7 1 657 456 1125 F 657 92.24 716 reject_low 1 ALIGNMENT 83 YS2-2l02.q1k vc_7 422 305 4584 4699 C 118 91.53 873 reject_low 11 ALIGNMENT 328 YS2-2l03.p1k vc_5 571 1 4087 4669 C 571 87.04 582 reject_vc 0 ALIGNMENT 264 YS2-2l03.q1k vc_4 410 1 5236 5654 C 410 89.27 690 reject_low 7 ALIGNMENT 22 YS2-2l03.q1k vc_4 241 295 1550 1607 F 55 81.82 690 reject_low 14 ALIGNMENT 0 YS2-2l03.q1k vc_4 240 62 111 110 C 179 0.00 690 reject_low 12 ALIGNMENT 242 YS2-2l03.q1k vc_1 1 295 2689 2985 F 295 94.58 690 reject_low 8 ALIGNMENT 319 YS2-2l03.p1k vc_7 1 474 456 933 F 474 89.66 582 reject_low 1 ALIGNMENT 325 YS2-2l03.p1k vc_3 474 1 1272 1749 C 474 90.30 582 reject_low 5 ALIGNMENT 272 YS2-2l03.q1k vc_5 1 421 2556 2984 F 421 89.31 690 reject_vc 0 ALIGNMENT 242 YS2-2l03.q1k vc_2 1 295 2322 2618 F 295 94.58 690 reject_low 9 ALIGNMENT 51 YS2-2l03.q1k vc_7 54 3 6360 6411 C 52 100.00 690|1,0 reject_low 11 ALIGNMENT 325 YS2-2l03.p1k vc_1 474 1 1272 1749 C 474 90.30 582 reject_low 3 ALIGNMENT 22 YS2-2l03.q1k vc_4 299 241 6275 6337 C 59 81.36 690 reject_low 13 ALIGNMENT 325 YS2-2l03.p1k vc_2 474 1 1272 1749 C 474 90.30 582 reject_low 4 ALIGNMENT 187 YS2-2l03.q1k vc_7 299 53 4923 5172 C 247 92.71 690|0,1 reject_low 11 ALIGNMENT 327 YS2-2l03.p1k vc_6 1 567 3712 4290 F 567 87.13 582 reject_low 2 ALIGNMENT 0 YS2-2l03.q1k vc_4 240 62 6338 6337 C 179 0.00 690 reject_low 13 ALIGNMENT 271 YS2-2l03.q1k vc_7 410 1 2153 2569 C 410 89.76 690 reject_low 1 ALIGNMENT 319 YS2-2l03.p1k vc_7 1 474 13918 14395 F 474 89.66 582 reject_low 6 ALIGNMENT 0 YS2-2l03.q1k vc_4 62 240 1550 1549 F 179 0.00 690 reject_low 14 ALIGNMENT 0 YS2-2l03.q1k vc_7 53 54 5172 6360 C 0 0.00 690 reject_low 11 ALIGNMENT 22 YS2-2l03.q1k vc_4 299 241 48 110 C 59 81.36 690 reject_low 12 ALIGNMENT 242 YS2-2l03.q1k vc_3 1 295 2689 2985 F 295 94.58 690 reject_low 10 ALIGNMENT 0 YS2-2l04.p1k chr06 229 212 194929 194928 C 18 0.00 229 accept 0 ALIGNMENT 177 YS2-2l04.p1k chr06 211 30 194928 195110 C 182 99.45 229 accept 0 ALIGNMENT 829 YS2-2l05.q1k chr02 25 1096 519368 520434 F 1072 94.12 1288 accept 0 ALIGNMENT 753 YS2-2l05.p1k chr02 1095 32 523549 524584 C 1064 93.61 1338 accept 0 ALIGNMENT 836 YS2-2l08.q1k chr07 1012 33 1063634 1064604 C 980 96.22 1316 accept 0 ALIGNMENT 694 YS2-2l08.p1k chr07 104 1146 1059375 1060393 F 1043 91.28 1309 accept 0 ALIGNMENT 20 YS2-2l09.p1k chr16 67 33 899504 899535 C 35 91.43 1426 accept 0 ALIGNMENT 581 YS2-2l09.p1k chr16 979 188 898626 899413 C 792 91.67 1426 accept 0 ALIGNMENT 0 YS2-2l09.p1k chr16 187 68 899414 899503 C 120 0.00 1426 accept 0 ALIGNMENT 0 YS2-2l10.p1k chr08 62 845 373856 373855 F 784 0.00 1346 reject_low 1 ALIGNMENT 24 YS2-2l10.p1k chr08 846 885 373856 373895 F 40 87.50 1346 reject_low 1 ALIGNMENT 1046 YS2-2l10.p1k chr16 1311 31 164064 165367 C 1281 95.24 1346 accept 0 ALIGNMENT 1012 YS2-2l11.p1k chr10 34 1188 82096 83256 F 1155 96.19 1347 accept 0 ALIGNMENT 730 YS2-2l11.q1k chr10 882 3 84063 84931 C 880 95.68 1275 accept 0 ALIGNMENT 41 YS2-2l13.q1k vc_1 139 99 2472 2512 C 41 100.00 1207 reject_low 11 ALIGNMENT 0 YS2-2l13.q1k vc_7 349 350 5172 6360 C 0 0.00 1207 reject_low 8 ALIGNMENT 0 YS2-2l13.q1k vc_5 62 138 2398 2397 F 77 0.00 1207 reject_vc 0 ALIGNMENT 0 YS2-2l13.q1k vc_3 318 140 2473 2472 C 179 0.00 1207 reject_low 13 ALIGNMENT 0 YS2-2l13.q1k vc_5 100 62 37 36 C 39 0.00 1207 reject_low 17 ALIGNMENT 0 YS2-2l13.q1k vc_2 98 62 2146 2145 C 37 0.00 1207 reject_low 12 ALIGNMENT 0 YS2-2l13.q1k vc_7 138 62 2728 2727 C 77 0.00 1207 reject_vc 1 ALIGNMENT 0 YS2-2l13.q1k vc_1 98 62 2513 2512 C 37 0.00 1207 reject_low 11 ALIGNMENT 157 YS2-2l13.q1k vc_4 139 300 126 287 F 162 99.38 1207 reject_low 7 ALIGNMENT 47 YS2-2l13.q1k vc_7 350 299 6360 6411 C 52 98.08 1207|1,0 reject_low 8 ALIGNMENT 0 YS2-2l13.q1k vc_4 140 139 5872 6353 F 0 0.00 1207 reject_low 9 ALIGNMENT 378 YS2-2l13.q1k vc_5 139 698 2398 2949 F 560 90.54 1207 reject_vc 0 ALIGNMENT 371 YS2-2l13.q1k vc_4 698 139 5259 5812 C 560 90.18 1207 reject_vc 2 ALIGNMENT 0 YS2-2l13.q1k vc_7 298 62 6412 6411 C 237 0.00 1207 reject_low 8 ALIGNMENT 0 YS2-2l13.q1k vc_7 62 101 13525 13524 F 40 0.00 1207 reject_low 16 ALIGNMENT 0 YS2-2l13.q1k vc_7 140 318 13562 13561 F 179 0.00 1207 reject_low 16 ALIGNMENT 38 YS2-2l13.q1k vc_7 102 139 13525 13562 F 38 100.00 1207 reject_low 16 ALIGNMENT 365 YS2-2l13.q1k vc_3 139 604 2531 2991 F 466 93.78 1207 reject_low 5 ALIGNMENT 0 YS2-2l13.q1k vc_2 318 140 2106 2105 C 179 0.00 1207 reject_low 12 ALIGNMENT 0 YS2-2l13.q1k vc_5 100 62 5064 5063 C 39 0.00 1207 reject_low 14 ALIGNMENT 0 YS2-2l13.q1k vc_4 138 62 1535 1534 C 77 0.00 1207 reject_low 10 ALIGNMENT 0 YS2-2l13.q1k vc_4 138 62 5813 5812 C 77 0.00 1207 reject_vc 2 ALIGNMENT 36 YS2-2l13.q1k vc_5 136 101 1 36 C 36 100.00 1207 reject_low 17 ALIGNMENT 0 YS2-2l13.q1k vc_4 301 318 6514 6513 F 18 0.00 1207 reject_low 9 ALIGNMENT 0 YS2-2l13.q1k vc_7 140 318 100 99 F 179 0.00 1207 reject_low 15 ALIGNMENT 0 YS2-2l13.q1k vc_3 98 62 2513 2512 C 37 0.00 1207 reject_low 13 ALIGNMENT 0 YS2-2l13.q1k vc_3 62 138 2531 2530 F 77 0.00 1207 reject_low 5 ALIGNMENT 157 YS2-2l13.q1k vc_4 139 300 6353 6514 F 162 99.38 1207|1,0 reject_low 9 ALIGNMENT 0 YS2-2l13.q1k vc_1 318 140 2473 2472 C 179 0.00 1207 reject_low 11 ALIGNMENT 0 YS2-2l13.q1k vc_7 62 101 63 62 F 40 0.00 1207 reject_low 15 ALIGNMENT 0 YS2-2l13.q1k vc_2 62 138 2164 2163 F 77 0.00 1207 reject_low 4 ALIGNMENT 365 YS2-2l13.q1k vc_2 139 604 2164 2624 F 466 93.78 1207 reject_low 4 ALIGNMENT 161 YS2-2l13.q1k vc_7 604 349 4922 5172 C 256 89.06 1207|0,1 reject_low 8 ALIGNMENT 87 YS2-2l13.q1k vc_4 227 139 1446 1534 C 89 100.00 1207 reject_low 10 ALIGNMENT 41 YS2-2l13.q1k vc_2 139 99 2105 2145 C 41 100.00 1207 reject_low 12 ALIGNMENT 0 YS2-2l13.q1k vc_4 301 318 287 286 F 18 0.00 1207 reject_low 7 ALIGNMENT 0 YS2-2l13.q1k vc_4 318 228 1447 1446 C 91 0.00 1207 reject_low 10 ALIGNMENT 0 YS2-2l13.q1k chr10 99 318 658491 658490 F 220 0.00 1207 reject_low 6 ALIGNMENT 41 YS2-2l13.q1k vc_4 99 139 5831 5871 F 41 100.00 1207 reject_low 9 ALIGNMENT 39 YS2-2l13.q1k vc_5 139 101 5025 5063 C 39 100.00 1207 reject_low 14 ALIGNMENT 0 YS2-2l13.q1k vc_4 62 138 126 125 F 77 0.00 1207 reject_low 7 ALIGNMENT 0 YS2-2l13.q1k vc_1 62 138 2531 2530 F 77 0.00 1207 reject_low 3 ALIGNMENT 0 YS2-2l13.q1k vc_5 318 140 5026 5025 C 179 0.00 1207 reject_low 14 ALIGNMENT 0 YS2-2l13.q1k vc_4 62 98 5831 5830 F 37 0.00 1207 reject_low 9 ALIGNMENT 0 YS2-2l13.q1k vc_5 318 137 2 1 C 182 0.00 1207 reject_low 17 ALIGNMENT 74 YS2-2l13.q1k chr10 3 98 658398 658491 F 96 94.79 1207 reject_low 6 ALIGNMENT 378 YS2-2l13.q1k vc_7 698 139 2176 2727 C 560 90.54 1207 reject_vc 1 ALIGNMENT 38 YS2-2l13.q1k vc_7 102 139 63 100 F 38 100.00 1207 reject_low 15 ALIGNMENT 365 YS2-2l13.q1k vc_1 139 604 2531 2991 F 466 93.78 1207 reject_low 3 ALIGNMENT 41 YS2-2l13.q1k vc_3 139 99 2472 2512 C 41 100.00 1207 reject_low 13 ALIGNMENT 781 YS2-2l14.q1k chr16 956 1 21258 22206 C 956 95.29 1252 accept 0 ALIGNMENT 794 YS2-2l14.p1k chr15 1083 54 1072274 1073323 C 1030 93.20 1169 reject_low 1 ALIGNMENT 879 YS2-2l14.p1k chr16 30 1083 17526 18594 F 1054 95.35 1169 accept 0 ALIGNMENT 722 YS2-2l15.p1k chr15 775 29 796545 797293 C 747 99.20 1260 accept_chi 0 ALIGNMENT 0 YS2-2l15.p1k vc_2 793 62 2106 2105 C 732 0.00 1260 reject_low 3 ALIGNMENT 0 YS2-2l15.p1k vc_3 793 62 2473 2472 C 732 0.00 1260 reject_low 12 ALIGNMENT 0 YS2-2l15.p1k chr15 808 776 796546 796545 C 33 0.00 1260 accept_chi 0 ALIGNMENT 203 YS2-2l15.p1k vc_5 1192 794 4608 5025 C 399 85.71 1260 reject_low 5 ALIGNMENT 203 YS2-2l15.p1k vc_7 794 1192 13562 13979 F 399 85.71 1260 reject_low 7 ALIGNMENT 22 YS2-2l15.p1k vc_3 825 794 2441 2472 C 32 93.75 1260 reject_low 12 ALIGNMENT 722 YS2-2l15.q1k chr15 16 764 796545 797293 F 749 99.07 1268 accept_chi 1 ALIGNMENT 22 YS2-2l15.p1k vc_1 825 794 2441 2472 C 32 93.75 1260 reject_low 11 ALIGNMENT 0 YS2-2l15.p1k vc_1 793 62 2473 2472 C 732 0.00 1260 reject_low 11 ALIGNMENT 0 YS2-2l15.p1k vc_1 793 62 2106 2105 C 732 0.00 1260 reject_low 2 ALIGNMENT 0 YS2-2l15.p1k vc_7 62 793 13562 13561 F 732 0.00 1260 reject_low 7 ALIGNMENT 61 YS2-2l15.q1k vc_3 804 933 2531 2661 F 130 83.85 1268 reject_low 10 ALIGNMENT 61 YS2-2l15.q1k vc_1 804 933 2531 2661 F 130 83.85 1268 reject_low 9 ALIGNMENT 0 YS2-2l15.p1k vc_4 62 793 5871 5870 F 732 0.00 1260 reject_low 8 ALIGNMENT 0 YS2-2l15.p1k vc_5 793 62 5026 5025 C 732 0.00 1260 reject_low 5 ALIGNMENT 0 YS2-2l15.q1k vc_3 62 803 2531 2530 F 742 0.00 1268 reject_low 10 ALIGNMENT 203 YS2-2l15.p1k vc_2 1192 794 1688 2105 C 399 85.71 1260 reject_low 3 ALIGNMENT 203 YS2-2l15.p1k vc_7 794 1192 100 517 F 399 85.71 1260 reject_low 6 ALIGNMENT 0 YS2-2l15.q1k vc_1 62 803 2531 2530 F 742 0.00 1268 reject_low 9 ALIGNMENT 203 YS2-2l15.p1k vc_1 1192 794 1688 2105 C 399 85.71 1260 reject_low 2 ALIGNMENT 0 YS2-2l15.p1k vc_7 62 793 100 99 F 732 0.00 1260 reject_low 6 ALIGNMENT 0 YS2-2l15.p1k vc_3 793 62 2106 2105 C 732 0.00 1260 reject_low 4 ALIGNMENT 203 YS2-2l15.p1k vc_3 1192 794 1688 2105 C 399 85.71 1260 reject_low 4 ALIGNMENT 199 YS2-2l15.p1k vc_4 794 1135 5871 6223 F 342 87.72 1260 reject_low 8 ALIGNMENT 823 YS2-2l16.q1k chr11 28 1069 432126 433165 F 1042 94.24 1311 accept 0 ALIGNMENT 0 YS2-2l16.q1k chr08 268 713 105088 105087 F 446 0.00 1311 reject_low 1 ALIGNMENT 232 YS2-2l16.q1k chr08 28 267 104849 105088 F 240 99.17 1311 reject_low 1 ALIGNMENT 726 YS2-2l17.q1k chr10 30 947 505257 506157 F 918 95.42 1343 accept 0 ALIGNMENT 944 YS2-2l18.p1k chr09 1167 23 132351 133515 C 1145 94.59 1242 accept 0 ALIGNMENT 723 YS2-2l18.q1k chr09 47 866 128707 129519 F 820 96.71 1322 accept 0 ALIGNMENT 0 YS2-2l19.p1k chr09 807 62 207205 207204 C 746 0.00 1219 reject_low 4 ALIGNMENT 887 YS2-2l19.p1k chr09 1036 31 206884 207906 C 1006 97.12 1219 ambiguous_trans 1 ALIGNMENT 742 YS2-2l19.q1k chr04 29 896 1255510 1256370 F 868 96.66 1229 accept 0 ALIGNMENT 87 YS2-2l19.p1k chr09 957 808 207052 207204 C 150 87.33 1219 reject_low 4 ALIGNMENT 805 YS2-2l19.p1k chr07 882 31 708956 709810 C 852 98.71 1219 ambiguous_trans 2 ALIGNMENT 0 YS2-2l19.p1k chr07 807 62 709109 709108 C 746 0.00 1219 reject_low 3 ALIGNMENT 0 YS2-2l19.p1k chr09 776 62 207002 207001 C 715 0.00 1219 reject_low 7 ALIGNMENT 0 YS2-2l19.p1k chr07 776 62 708984 708983 C 715 0.00 1219 reject_low 6 ALIGNMENT 22 YS2-2l19.p1k chr09 804 777 206974 207001 C 28 92.86 1219 reject_low 7 ALIGNMENT 0 YS2-2l19.p1k chr09 760 62 207096 207095 C 699 0.00 1219 reject_low 5 ALIGNMENT 92 YS2-2l19.p1k chr09 882 761 206974 207095 C 122 91.80 1219 reject_low 5 ALIGNMENT 107 YS2-2l19.p1k chr07 1036 808 708866 709108 C 229 84.72 1219 reject_low 3 ALIGNMENT 22 YS2-2l19.p1k chr07 804 777 708956 708983 C 28 92.86 1219 reject_low 6 ALIGNMENT 457 YS2-2l20.p1k chr04 30 518 565040 565528 F 489 98.77 537 accept 0 ALIGNMENT 0 YS2-2l20.p1k chr04 519 537 565528 565527 F 19 0.00 537 accept 0 ALIGNMENT 433 YS2-2l20.q1k chr04 515 29 565043 565528 C 487 97.33 1334 accept 0 ALIGNMENT 679 YS2-2l21.q1k chr13 883 1 842922 843798 C 883 93.43 1132 accept 0 ALIGNMENT 835 YS2-2l23.q1k chr02 984 27 667497 668444 C 958 96.76 1195 accept 0 ALIGNMENT 888 YS2-2l23.p1k chr02 39 1064 663919 664947 F 1026 96.20 1215 accept 0 ALIGNMENT 745 YS2-2l24.p1k chr06 1044 28 167538 168588 C 1017 92.53 1223 accept 0 ALIGNMENT 690 YS2-2l24.q1k chr06 32 884 163805 164654 F 853 94.26 1190 accept 0 ALIGNMENT 21 YS2-2m01.p1k chr02 30 50 258900 258920 F 21 100.00 1222 reject_low 2 ALIGNMENT 717 YS2-2m01.q1k chr09 1018 35 304041 305005 C 984 93.50 1220 accept 0 ALIGNMENT 208 YS2-2m01.p1k chr16 687 207 688198 688672 C 481 82.74 1222 reject_low 1 ALIGNMENT 979 YS2-2m01.p1k chr09 30 1222 300662 301857 F 1193 95.39 1222 accept 0 ALIGNMENT 0 YS2-2m01.p1k chr02 51 824 258920 258919 F 774 0.00 1222 reject_low 2 ALIGNMENT 0 YS2-2m01.p1k chr16 206 62 688673 688672 C 145 0.00 1222 reject_low 1 ALIGNMENT 0 YS2-2m01.p1k chr16 824 688 688199 688198 C 137 0.00 1222 reject_low 1 ALIGNMENT 866 YS2-2m02.q1k chr07 1107 29 842831 843910 C 1079 94.62 1192 accept 0 ALIGNMENT 985 YS2-2m02.p1k chr07 30 1247 838405 839619 F 1218 95.24 1275 accept 0 ALIGNMENT 173 YS2-2m04.p1k chr02 32 211 397611 397790 F 180 100.00 229 accept 0 ALIGNMENT 0 YS2-2m04.p1k chr02 212 229 397790 397789 F 18 0.00 229 accept 0 ALIGNMENT 422 YS2-2m05.p1k chr04 479 30 402132 402581 C 450 99.56 498 accept_chi 0 ALIGNMENT 266 YS2-2m05.q1k chr04 12 398 402179 402561 F 387 91.73 1356 accept_chi 1 ALIGNMENT 0 YS2-2m05.p1k chr04 498 480 402133 402132 C 19 0.00 498 accept_chi 0 ALIGNMENT 0 YS2-2m07.q1k vc_4 404 403 5872 6353 F 0 0.00 1300 reject_low 9 ALIGNMENT 0 YS2-2m07.q1k vc_2 92 402 2164 2163 F 311 0.00 1300 reject_low 6 ALIGNMENT 38 YS2-2m07.q1k vc_7 366 403 13525 13562 F 38 100.00 1300 reject_low 17 ALIGNMENT 0 YS2-2m07.q1k vc_4 402 92 1535 1534 C 311 0.00 1300 reject_low 11 ALIGNMENT 36 YS2-2m07.q1k vc_5 400 365 1 36 C 36 100.00 1300 reject_low 18 ALIGNMENT 51 YS2-2m07.q1k vc_7 614 563 6360 6411 C 52 100.00 1300|1,0 reject_low 10 ALIGNMENT 156 YS2-2m07.q1k vc_4 403 564 126 287 F 162 99.38 1300 reject_low 8 ALIGNMENT 87 YS2-2m07.q1k vc_4 491 403 1446 1534 C 89 100.00 1300 reject_low 11 ALIGNMENT 0 YS2-2m07.q1k vc_4 598 492 1447 1446 C 107 0.00 1300 reject_low 11 ALIGNMENT 0 YS2-2m07.q1k vc_7 402 92 2728 2727 C 311 0.00 1300 reject_low 3 ALIGNMENT 0 YS2-2m07.q1k vc_5 364 92 37 36 C 273 0.00 1300 reject_low 18 ALIGNMENT 0 YS2-2m07.q1k vc_5 364 92 5064 5063 C 273 0.00 1300 reject_low 15 ALIGNMENT 0 YS2-2m07.q1k vc_2 598 404 2106 2105 C 195 0.00 1300 reject_low 13 ALIGNMENT 371 YS2-2m07.q1k vc_2 403 867 2164 2623 F 465 94.62 1300 reject_low 6 ALIGNMENT 371 YS2-2m07.q1k vc_1 403 867 2531 2990 F 465 94.62 1300 reject_low 5 ALIGNMENT 38 YS2-2m07.q1k vc_7 366 403 63 100 F 38 100.00 1300 reject_low 16 ALIGNMENT 0 YS2-2m07.q1k vc_5 598 404 5026 5025 C 195 0.00 1300 reject_low 15 ALIGNMENT 0 YS2-2m07.q1k vc_7 92 365 13525 13524 F 274 0.00 1300 reject_low 17 ALIGNMENT 418 YS2-2m07.q1k vc_7 1008 403 2131 2727 C 606 91.09 1300 reject_low 3 ALIGNMENT 0 YS2-2m07.q1k vc_1 92 402 2531 2530 F 311 0.00 1300 reject_low 5 ALIGNMENT 0 YS2-2m07.q1k vc_4 92 360 5829 5828 F 269 0.00 1300 reject_low 9 ALIGNMENT 0 YS2-2m07.q1k vc_1 598 404 2473 2472 C 195 0.00 1300 reject_low 12 ALIGNMENT 163 YS2-2m07.q1k vc_7 867 613 4923 5172 C 255 90.20 1300|0,1 reject_low 10 ALIGNMENT 48 YS2-2m07.q1k vc_4 879 1008 1884 2010 F 130 80.77 1300 reject_low 8 ALIGNMENT 0 YS2-2m07.q1k vc_7 613 614 5172 6360 C 0 0.00 1300 reject_low 10 ALIGNMENT 0 YS2-2m07.q1k vc_7 404 598 13562 13561 F 195 0.00 1300 reject_low 17 ALIGNMENT 0 YS2-2m07.q1k vc_3 360 92 2515 2514 C 269 0.00 1300 reject_low 14 ALIGNMENT 42 YS2-2m07.q1k vc_4 361 403 5829 5871 F 43 100.00 1300 reject_low 9 ALIGNMENT 39 YS2-2m07.q1k vc_5 403 365 5025 5063 C 39 100.00 1300 reject_low 15 ALIGNMENT 156 YS2-2m07.q1k vc_4 403 564 6353 6514 F 162 99.38 1300|1,0 reject_low 9 ALIGNMENT 0 YS2-2m07.q1k vc_5 598 401 2 1 C 198 0.00 1300 reject_low 18 ALIGNMENT 0 YS2-2m07.q1k vc_3 92 402 2531 2530 F 311 0.00 1300 reject_low 7 ALIGNMENT 371 YS2-2m07.q1k vc_3 403 867 2531 2990 F 465 94.62 1300 reject_low 7 ALIGNMENT 0 YS2-2m07.q1k vc_5 92 402 2398 2397 F 311 0.00 1300 reject_low 2 ALIGNMENT 0 YS2-2m07.p1k chr05 391 374 418938 418937 C 18 0.00 391 accept_chi 0 ALIGNMENT 0 YS2-2m07.q1k vc_4 565 878 288 1883 F 314 0.00 1300 reject_low 8 ALIGNMENT 0 YS2-2m07.q1k vc_7 562 92 6412 6411 C 471 0.00 1300 reject_low 10 ALIGNMENT 0 YS2-2m07.q1k vc_7 878 868 4692 4922 C 11 0.00 1300 reject_low 10 ALIGNMENT 0 YS2-2m07.q1k vc_4 565 598 6514 6513 F 34 0.00 1300 reject_low 9 ALIGNMENT 42 YS2-2m07.q1k vc_3 403 361 2472 2514 C 43 100.00 1300 reject_low 14 ALIGNMENT 322 YS2-2m07.q1k chr05 25 362 418937 419274 F 338 98.82 1300 accept_chi 1 ALIGNMENT 0 YS2-2m07.q1k vc_3 598 404 2473 2472 C 195 0.00 1300 reject_low 14 ALIGNMENT 0 YS2-2m07.q1k vc_2 360 92 2148 2147 C 269 0.00 1300 reject_low 13 ALIGNMENT 0 YS2-2m07.q1k vc_1 360 92 2515 2514 C 269 0.00 1300 reject_low 12 ALIGNMENT 42 YS2-2m07.q1k vc_1 403 361 2472 2514 C 43 100.00 1300 reject_low 12 ALIGNMENT 0 YS2-2m07.q1k chr05 363 598 419274 419273 F 236 0.00 1300 accept_chi 1 ALIGNMENT 43 YS2-2m07.q1k vc_7 979 879 4593 4691 C 101 82.18 1300 reject_low 10 ALIGNMENT 0 YS2-2m07.q1k vc_4 402 92 5813 5812 C 311 0.00 1300 reject_low 4 ALIGNMENT 0 YS2-2m07.q1k vc_7 404 598 100 99 F 195 0.00 1300 reject_low 16 ALIGNMENT 42 YS2-2m07.q1k vc_2 403 361 2105 2147 C 43 100.00 1300 reject_low 13 ALIGNMENT 0 YS2-2m07.q1k vc_4 92 402 126 125 F 311 0.00 1300 reject_low 8 ALIGNMENT 418 YS2-2m07.q1k vc_5 403 1008 2398 2994 F 606 91.09 1300 reject_low 2 ALIGNMENT 405 YS2-2m07.q1k vc_4 979 403 5242 5812 C 577 91.51 1300 reject_low 4 ALIGNMENT 330 YS2-2m07.p1k chr05 373 36 418937 419274 C 338 99.70 391 accept_chi 0 ALIGNMENT 0 YS2-2m07.q1k vc_7 92 365 63 62 F 274 0.00 1300 reject_low 16 ALIGNMENT 895 YS2-2m08.p1k chr08 31 1048 125043 126074 F 1018 96.76 1293 accept 0 ALIGNMENT 792 YS2-2m08.q1k chr08 1040 27 128863 129868 C 1014 94.38 1354 accept 0 ALIGNMENT 829 YS2-2m09.p1k chr04 1069 30 1141250 1142306 C 1040 95.19 1268 accept 0 ALIGNMENT 654 YS2-2m09.q1k chr04 31 848 1137698 1138502 F 818 95.11 1316 accept 0 ALIGNMENT 831 YS2-2m10.q1k chr14 2 953 188714 189658 F 952 96.64 1285 accept 0 ALIGNMENT 946 YS2-2m10.p1k chr14 1064 30 193040 194084 C 1035 98.55 1282 accept 0 ALIGNMENT 494 YS2-2m11.p1k chr04 33 547 456341 456855 F 515 100.00 566 accept 0 ALIGNMENT 37 YS2-2m11.q1k vc_7 52 1 6360 6411 C 52 90.38 559 reject_vc 1 ALIGNMENT 0 YS2-2m11.p1k chr04 548 566 456855 456854 F 19 0.00 566 accept 0 ALIGNMENT 0 YS2-2m12.p1k chrm 111 62 77225 77224 C 50 0.00 1267 accept 0 ALIGNMENT 0 YS2-2m12.q1k chrm 88 547 2801 2800 F 460 0.00 1190 reject_low 9 ALIGNMENT 36 YS2-2m12.q1k chrm 79 36 81404 81447 C 44 97.73 1190 reject_low 10 ALIGNMENT 559 YS2-2m12.p1k chrm 854 112 76483 77224 C 743 97.04 1267 accept 0 ALIGNMENT 38 YS2-2m12.p1k chrm 701 766 33449 33515 F 66 89.39 1267 reject_low 8 ALIGNMENT 41 YS2-2m12.p1k chrm 758 699 52758 52815 C 60 91.67 1267 reject_low 6 ALIGNMENT 0 YS2-2m12.p1k chrm 694 62 53875 53874 C 633 0.00 1267 reject_low 11 ALIGNMENT 50 YS2-2m12.p1k chrm 695 750 71208 71262 F 56 98.21 1267 reject_low 5,7,10 ALIGNMENT 0 YS2-2m12.q1k chrm 92 547 52386 52385 F 456 0.00 1190 reject_low 6 ALIGNMENT 43 YS2-2m12.q1k chrm 90 38 3048 3101 C 53 94.34 1190 reject_low 14 ALIGNMENT 44 YS2-2m12.q1k chrm 87 32 77664 77719 C 56 92.86 1190 reject_low 7 ALIGNMENT 0 YS2-2m12.p1k chrm 62 677 9467 9466 F 616 0.00 1267 reject_low 2 ALIGNMENT 40 YS2-2m12.p1k chrm 748 695 53823 53874 C 54 94.44 1267 reject_low 11 ALIGNMENT 0 YS2-2m12.q1k chrm 547 81 29841 29840 C 467 0.00 1190 reject_low 15 ALIGNMENT 33 YS2-2m12.q1k chrm 79 36 52772 52815 C 44 95.45 1190 reject_low 16 ALIGNMENT 47 YS2-2m12.p1k chrm 758 681 83040 83116 C 78 89.74 1267 reject_low 4 ALIGNMENT 43 YS2-2m12.q1k chrm 87 33 34927 34981 C 55 92.73 1190 reject_low 8 ALIGNMENT 38 YS2-2m12.q1k chrm 80 34 29840 29886 C 47 95.74 1190 reject_low 15 ALIGNMENT 244 YS2-2m12.q1k chrm 17 289 75600 75872 F 273 99.63 1190|0,1 accept 0 ALIGNMENT 0 YS2-2m12.p1k chrm 62 694 71208 71207 F 633 0.00 1267 reject_low 5,7,10 ALIGNMENT 0 YS2-2m12.p1k chrm 698 62 9076 9075 C 637 0.00 1267 reject_low 9 ALIGNMENT 0 YS2-2m12.p1k chrm 62 700 33449 33448 F 639 0.00 1267 reject_low 8 ALIGNMENT 0 YS2-2m12.q1k chrm 88 547 9539 9538 F 460 0.00 1190 reject_low 12 ALIGNMENT 0 YS2-2m12.q1k chrm 547 88 76588 76587 C 460 0.00 1190 reject_low 5 ALIGNMENT 44 YS2-2m12.q1k chrm 24 91 52319 52386 F 68 89.71 1190 reject_low 6 ALIGNMENT 36 YS2-2m12.q1k chrm 16 91 31019 31094 F 76 84.21 1190 reject_low 3 ALIGNMENT 51 YS2-2m12.p1k chrm 757 696 34921 34981 C 62 95.16 1267 reject_low 3 ALIGNMENT 233 YS2-2m12.q1k chrm 288 726 75902 76338 F 439 92.48 1190|1,0 accept 0 ALIGNMENT 49 YS2-2m12.q1k chrm 87 30 76587 76644 C 58 94.83 1190 reject_low 5 ALIGNMENT 0 YS2-2m12.q1k chrm 81 547 71256 71255 F 467 0.00 1190 reject_low 4 ALIGNMENT 0 YS2-2m12.q1k chrm 547 81 10746 10745 C 467 0.00 1190 reject_low 2 ALIGNMENT 0 YS2-2m12.q1k chrm 289 288 75872 75902 F 0 0.00 1190 accept 0 ALIGNMENT 0 YS2-2m12.p1k chrm 695 62 34982 34981 C 634 0.00 1267 reject_low 3 ALIGNMENT 0 YS2-2m12.p1k chrm 698 74 77054 77053 C 625 0.00 1267 reject_low 1 ALIGNMENT 0 YS2-2m12.q1k chrm 547 80 81405 81404 C 468 0.00 1190 reject_low 10 ALIGNMENT 34 YS2-2m12.p1k chrm 73 29 77053 77096 C 45 95.56 1267 reject_low 1 ALIGNMENT 46 YS2-2m12.q1k chrm 80 24 9031 9088 C 57 94.74 1190 reject_low 13 ALIGNMENT 45 YS2-2m12.q1k chrm 30 87 2743 2801 F 58 93.10 1190 reject_low 9 ALIGNMENT 50 YS2-2m12.q1k chrm 26 87 9478 9539 F 62 93.55 1190 reject_low 12 ALIGNMENT 44 YS2-2m12.q1k chrm 32 80 71208 71256 F 49 97.96 1190 reject_low 4 ALIGNMENT 43 YS2-2m12.p1k chrm 748 699 9027 9075 C 50 98.00 1267 reject_low 9 ALIGNMENT 0 YS2-2m12.p1k chrm 680 62 83117 83116 C 619 0.00 1267 reject_low 4 ALIGNMENT 0 YS2-2m12.q1k chrm 547 91 3049 3048 C 457 0.00 1190 reject_low 14 ALIGNMENT 0 YS2-2m12.q1k chrm 547 88 77665 77664 C 460 0.00 1190 reject_low 7 ALIGNMENT 62 YS2-2m12.p1k chrm 678 766 9467 9554 F 89 92.13 1267 reject_low 2 ALIGNMENT 0 YS2-2m12.q1k chrm 547 88 34928 34927 C 460 0.00 1190 reject_low 8 ALIGNMENT 0 YS2-2m12.q1k chrm 547 81 9032 9031 C 467 0.00 1190 reject_low 13 ALIGNMENT 0 YS2-2m12.q1k chrm 547 80 52773 52772 C 468 0.00 1190 reject_low 16 ALIGNMENT 0 YS2-2m12.q1k chrm 92 547 31094 31093 F 456 0.00 1190 reject_low 3 ALIGNMENT 0 YS2-2m12.p1k chrm 698 62 52816 52815 C 637 0.00 1267 reject_low 6 ALIGNMENT 34 YS2-2m12.q1k chrm 80 37 10745 10788 C 44 95.45 1190 reject_low 2 ALIGNMENT 751 YS2-2m13.p1k chr02 964 27 499426 500398 C 938 95.20 1234 accept 0 ALIGNMENT 673 YS2-2m13.q1k chr02 29 839 496162 496973 F 811 95.93 1261 accept 0 ALIGNMENT 0 YS2-2m14.p1k chr10 215 232 17077 17076 F 18 0.00 232 ambiguous_tel 1 ALIGNMENT 0 YS2-2m14.p1k chr09 215 232 17094 17093 F 18 0.00 232 ambiguous_tel 0 ALIGNMENT 168 YS2-2m14.p1k chr10 29 214 16891 17077 F 186 97.85 232 ambiguous_tel 1 ALIGNMENT 0 YS2-2m14.p1k chr07 213 232 1067536 1067535 F 20 0.00 232 reject_low 3 ALIGNMENT 165 YS2-2m14.p1k chr15 32 212 22651 22832 F 181 98.34 232 ambiguous_tel 2 ALIGNMENT 0 YS2-2m14.p1k chr15 213 232 22832 22831 F 20 0.00 232 ambiguous_tel 2 ALIGNMENT 112 YS2-2m14.p1k chr07 39 212 1067363 1067536 F 174 89.08 232 reject_low 3 ALIGNMENT 168 YS2-2m14.p1k chr09 29 214 16908 17094 F 186 97.85 232 ambiguous_tel 0 ALIGNMENT 1014 YS2-2m15.p1k chr16 1244 29 841946 843162 C 1216 95.89 1335 accept 0 ALIGNMENT 707 YS2-2m15.q1k chr16 31 894 841026 841881 F 864 95.14 1292 accept 0 ALIGNMENT 667 YS2-2m16.p1k chr02 943 30 180863 181759 C 914 92.67 1114 accept 0 ALIGNMENT 769 YS2-2m16.q1k chr02 27 955 179453 180374 F 929 95.59 1309 accept 0 ALIGNMENT 0 YS2-2m18.p1k chr07 509 491 413930 413929 C 19 0.00 509 accept 0 ALIGNMENT 436 YS2-2m18.p1k chr07 490 30 413929 414389 C 461 99.35 509 accept 0 ALIGNMENT 99 YS2-2m19.q1k chr12 746 866 482044 482162 F 121 95.04 1285 reject_low 5 ALIGNMENT 94 YS2-2m19.q1k chr06 486 379 31622 31729 C 108 98.15 1285 reject_low 2 ALIGNMENT 0 YS2-2m19.q1k chr06 378 62 31730 31729 C 317 0.00 1285 reject_low 2 ALIGNMENT 0 YS2-2m19.q1k chr12 62 745 482044 482043 F 684 0.00 1285 reject_low 5 ALIGNMENT 108 YS2-2m19.q1k chr12 746 881 489348 489481 F 136 94.12 1285 reject_low 3 ALIGNMENT 0 YS2-2m19.q1k chr12 62 745 472464 472463 F 684 0.00 1285 reject_low 4 ALIGNMENT 99 YS2-2m19.q1k chr12 746 866 472464 472582 F 121 95.04 1285 reject_low 4 ALIGNMENT 99 YS2-2m19.q1k chr12 746 866 485696 485814 F 121 95.04 1285 reject_low 6 ALIGNMENT 767 YS2-2m19.q1k chr12 34 893 458962 459820 F 860 98.02 1285 accept 0 ALIGNMENT 0 YS2-2m19.q1k chr06 672 487 31623 31622 C 186 0.00 1285 reject_low 2 ALIGNMENT 0 YS2-2m19.q1k chr12 62 745 485696 485695 F 684 0.00 1285 reject_low 6 ALIGNMENT 0 YS2-2m19.q1k chr12 62 745 489348 489347 F 684 0.00 1285 reject_low 3 ALIGNMENT 744 YS2-2m19.q1k chr12 34 866 468099 468930 F 833 97.96 1285 reject_low 1 ALIGNMENT 267 YS2-2m20.q1k vc_2 1 302 2322 2623 F 302 96.69 830 reject_low 9 ALIGNMENT 42 YS2-2m20.q1k vc_4 302 238 6275 6339 C 65 90.77 830 reject_low 14 ALIGNMENT 0 YS2-2m20.q1k vc_7 304 303 4700 4922 C 2 0.00 830 reject_low 11 ALIGNMENT 387 YS2-2m20.p1k vc_6 1 576 3712 4298 F 576 88.72 588 reject_low 2 ALIGNMENT 267 YS2-2m20.q1k vc_3 1 302 2689 2990 F 302 96.69 830 reject_low 10 ALIGNMENT 0 YS2-2m20.q1k vc_4 62 237 1548 1547 F 176 0.00 830 reject_low 12 ALIGNMENT 384 YS2-2m20.p1k vc_2 576 1 1163 1749 C 576 88.54 588 reject_low 4 ALIGNMENT 42 YS2-2m20.q1k vc_4 238 302 1548 1612 F 65 90.77 830 reject_low 12 ALIGNMENT 387 YS2-2m20.p1k vc_5 576 1 4083 4669 C 576 88.72 588 reject_vc 0 ALIGNMENT 213 YS2-2m20.q1k vc_7 302 53 4923 5172 C 250 95.60 830|0,1 reject_low 11 ALIGNMENT 338 YS2-2m20.q1k vc_5 1 525 2556 3072 F 525 89.52 830 reject_vc 0 ALIGNMENT 48 YS2-2m20.q1k vc_7 417 305 4589 4699 C 113 82.30 830 reject_low 11 ALIGNMENT 384 YS2-2m20.p1k vc_1 576 1 1163 1749 C 576 88.54 588 reject_low 3 ALIGNMENT 338 YS2-2m20.q1k vc_7 525 1 2053 2569 C 525 89.52 830 reject_vc 1 ALIGNMENT 0 YS2-2m20.q1k vc_4 303 307 1613 1878 F 5 0.00 830 reject_low 12 ALIGNMENT 0 YS2-2m20.q1k vc_4 237 62 6340 6339 C 176 0.00 830 reject_low 14 ALIGNMENT 51 YS2-2m20.q1k vc_7 54 3 6360 6411 C 52 100.00 830|1,0 reject_low 11 ALIGNMENT 267 YS2-2m20.q1k vc_1 1 302 2689 2990 F 302 96.69 830 reject_low 8 ALIGNMENT 384 YS2-2m20.p1k vc_3 576 1 1163 1749 C 576 88.54 588 reject_low 5 ALIGNMENT 378 YS2-2m20.p1k vc_7 1 576 456 1042 F 576 88.19 588 reject_vc 1 ALIGNMENT 0 YS2-2m20.q1k vc_7 53 54 5172 6360 C 0 0.00 830 reject_low 11 ALIGNMENT 378 YS2-2m20.p1k vc_7 1 576 13918 14504 F 576 88.19 588 reject_low 6 ALIGNMENT 42 YS2-2m20.q1k vc_4 302 238 48 112 C 65 90.77 830 reject_low 13 ALIGNMENT 0 YS2-2m20.q1k vc_4 237 62 113 112 C 176 0.00 830 reject_low 13 ALIGNMENT 308 YS2-2m20.q1k vc_4 417 1 5238 5654 C 417 92.09 830 reject_low 7 ALIGNMENT 68 YS2-2m20.q1k vc_4 308 525 1879 2088 F 218 79.82 830 reject_low 12 ALIGNMENT 758 YS2-2m21.q1k chr15 924 27 440835 441724 C 898 96.21 1237 accept 0 ALIGNMENT 0 YS2-2m23.q1k chrm 338 268 75589 75588 C 71 0.00 1254 reject_low 13 ALIGNMENT 39 YS2-2m23.p1k chrm 276 333 10394 10451 F 58 91.38 1159 reject_low 15 ALIGNMENT 39 YS2-2m23.p1k chrm 274 319 83052 83097 F 46 97.83 1159 reject_low 17 ALIGNMENT 0 YS2-2m23.p1k chrm 334 724 10451 10450 F 391 0.00 1159 reject_low 15 ALIGNMENT 0 YS2-2m23.q1k chrm 92 192 77671 77670 F 101 0.00 1254 reject_low 19 ALIGNMENT 41 YS2-2m23.p1k chrm 380 259 71157 71271 C 122 82.79 1159 reject_low 7 ALIGNMENT 0 YS2-2m23.q1k chrm 191 92 33492 33491 C 100 0.00 1254 reject_low 11 ALIGNMENT 0 YS2-2m23.q1k chrm 237 338 65813 65812 F 102 0.00 1254 reject_low 7 ALIGNMENT 0 YS2-2m23.q1k chrm 92 131 48037 48036 F 40 0.00 1254 reject_low 3 ALIGNMENT 0 YS2-2m23.q1k chrm 181 92 75675 75674 C 90 0.00 1254 reject_low 13 ALIGNMENT 0 YS2-2m23.q1k chrm 248 338 77723 77722 F 91 0.00 1254 reject_low 19 ALIGNMENT 0 YS2-2m23.p1k chrm 724 381 71158 71157 C 344 0.00 1159 reject_low 7 ALIGNMENT 0 YS2-2m23.p1k chrm 593 62 12845 12844 C 532 0.00 1159 reject_low 1 ALIGNMENT 44 YS2-2m23.p1k chrm 232 319 8988 9075 F 88 85.23 1159 reject_low 4,6 ALIGNMENT 0 YS2-2m23.q1k chrm 205 92 116 115 C 114 0.00 1254 reject_low 18 ALIGNMENT 0 YS2-2m23.q1k chrm 338 268 71186 71185 C 71 0.00 1254 reject_low 12 ALIGNMENT 0 YS2-2m23.q1k chrm 338 254 67930 67929 C 85 0.00 1254 reject_low 14 ALIGNMENT 29 YS2-2m23.q1k chrm 193 247 77671 77723 F 55 87.27 1254 reject_low 19 ALIGNMENT 0 YS2-2m23.p1k chrm 62 592 44860 44859 F 531 0.00 1159 reject_low 2 ALIGNMENT 0 YS2-2m23.p1k chrm 272 62 31086 31085 C 211 0.00 1159 reject_low 5 ALIGNMENT 0 YS2-2m23.q1k chrm 233 338 2132 2131 F 106 0.00 1254 reject_low 1 ALIGNMENT 367 YS2-2m23.q1k chrm 598 26 30685 31249 C 573 93.54 1254 accept 0 ALIGNMENT 0 YS2-2m23.p1k chrm 560 343 56934 57004 C 218 0.00 1159 reject_low 3 ALIGNMENT 0 YS2-2m23.p1k chrm 62 212 48040 48039 F 151 0.00 1159 reject_low 8 ALIGNMENT 0 YS2-2m23.p1k chrm 320 724 9075 9074 F 405 0.00 1159 reject_low 4,6 ALIGNMENT 37 YS2-2m23.q1k chrm 267 182 75588 75674 C 86 83.72 1254 reject_low 13 ALIGNMENT 33 YS2-2m23.q1k chrm 238 168 12267 12335 C 71 84.51 1254 reject_low 6 ALIGNMENT 531 YS2-2m23.p1k chrm 37 784 29601 30344 F 748 97.59 1159 accept 0 ALIGNMENT 0 YS2-2m23.q1k chrm 338 245 78 77 C 94 0.00 1254 reject_low 18 ALIGNMENT 0 YS2-2m23.q1k chrm 92 164 2067 2066 F 73 0.00 1254 reject_low 1 ALIGNMENT 33 YS2-2m23.q1k chrm 244 206 77 115 C 39 97.44 1254 reject_low 18 ALIGNMENT 25 YS2-2m23.q1k chrm 340 274 33541 33606 C 67 85.07 1254 reject_low 9 ALIGNMENT 0 YS2-2m23.q1k chrm 338 247 9481 9480 C 92 0.00 1254 reject_low 4 ALIGNMENT 39 YS2-2m23.q1k chrm 253 166 67929 68014 C 88 85.23 1254 reject_low 14 ALIGNMENT 0 YS2-2m23.p1k chrm 278 62 57069 57068 C 217 0.00 1159 reject_low 3 ALIGNMENT 0 YS2-2m23.q1k chrm 92 305 30932 30931 F 214 0.00 1254 reject_low 5 ALIGNMENT 38 YS2-2m23.q1k chrm 267 182 71185 71267 C 86 84.88 1254 reject_low 12 ALIGNMENT 41 YS2-2m23.p1k chrm 213 361 48040 48185 F 149 81.21 1159 reject_low 8 ALIGNMENT 0 YS2-2m23.p1k chrm 322 724 50156 50155 F 403 0.00 1159 reject_low 16 ALIGNMENT 0 YS2-2m23.p1k chrm 362 724 48185 48184 F 363 0.00 1159 reject_low 8 ALIGNMENT 0 YS2-2m23.p1k chrm 62 231 8988 8987 F 170 0.00 1159 reject_low 4,6 ALIGNMENT 0 YS2-2m23.q1k chrm 167 92 12336 12335 C 76 0.00 1254 reject_low 6 ALIGNMENT 40 YS2-2m23.p1k chrm 253 317 3036 3101 F 65 89.23 1159 reject_low 10 ALIGNMENT 0 YS2-2m23.q1k chrm 165 92 68015 68014 C 74 0.00 1254 reject_low 14 ALIGNMENT 0 YS2-2m23.p1k chrm 62 275 10394 10393 F 214 0.00 1159 reject_low 15 ALIGNMENT 0 YS2-2m23.q1k chrm 181 92 71268 71267 C 90 0.00 1254 reject_low 12 ALIGNMENT 0 YS2-2m23.q1k chrm 237 338 48143 48142 F 102 0.00 1254 reject_low 3 ALIGNMENT 42 YS2-2m23.p1k chrm 274 321 50109 50156 F 48 97.92 1159 reject_low 16 ALIGNMENT 0 YS2-2m23.q1k chrm 338 239 12268 12267 C 100 0.00 1254 reject_low 6 ALIGNMENT 34 YS2-2m23.q1k chrm 132 236 48037 48143 F 105 80.95 1254 reject_low 3 ALIGNMENT 0 YS2-2m23.p1k chrm 62 252 3036 3035 F 191 0.00 1159 reject_low 10 ALIGNMENT 0 YS2-2m23.p1k chrm 320 724 83097 83096 F 405 0.00 1159 reject_low 17 ALIGNMENT 0 YS2-2m23.p1k chrm 62 273 83052 83051 F 212 0.00 1159 reject_low 17 ALIGNMENT 97 YS2-2m23.p1k chrm 920 594 12522 12844 C 327 82.26 1159 reject_low 1 ALIGNMENT 24 YS2-2m23.q1k chrm 306 344 30932 30970 F 39 87.18 1254 reject_low 5 ALIGNMENT 33 YS2-2m23.p1k chrm 326 273 31031 31085 C 54 88.89 1159 reject_low 5 ALIGNMENT 0 YS2-2m23.q1k chrm 162 92 9562 9561 C 71 0.00 1254 reject_low 4 ALIGNMENT 87 YS2-2m23.p1k chrm 785 561 56704 56933 C 225 84.44 1159 reject_low 3 ALIGNMENT 0 YS2-2m23.q1k chrm 92 205 65783 65782 F 114 0.00 1254 reject_low 7 ALIGNMENT 0 YS2-2m23.p1k chrm 258 62 71272 71271 C 197 0.00 1159 reject_low 7 ALIGNMENT 44 YS2-2m23.q1k chrm 246 163 9480 9561 C 84 86.90 1254 reject_low 4 ALIGNMENT 39 YS2-2m23.q1k chrm 165 232 2067 2132 F 68 88.24 1254 reject_low 1 ALIGNMENT 0 YS2-2m23.p1k chrm 724 327 31032 31031 C 398 0.00 1159 reject_low 5 ALIGNMENT 21 YS2-2m23.q1k chrm 206 236 65783 65813 F 31 96.77 1254 reject_low 7 ALIGNMENT 30 YS2-2m23.q1k chrm 280 192 33405 33491 C 89 83.15 1254 reject_low 11 ALIGNMENT 0 YS2-2m23.q1k chrm 273 92 33607 33606 C 182 0.00 1254 reject_low 9 ALIGNMENT 114 YS2-2m23.p1k chrm 593 781 44860 45048 F 189 89.95 1159 reject_low 2 ALIGNMENT 0 YS2-2m23.p1k chrm 318 724 3101 3100 F 407 0.00 1159 reject_low 10 ALIGNMENT 0 YS2-2m23.q1k chrm 338 281 33406 33405 C 58 0.00 1254 reject_low 11 ALIGNMENT 46 YS2-2m23.p1k chrm 342 279 57005 57068 C 64 92.19 1159 reject_low 3 ALIGNMENT 0 YS2-2m23.p1k chrm 62 273 50109 50108 F 212 0.00 1159 reject_low 16 ALIGNMENT 373 YS2-2m24.p1k chr02 33 409 204734 205110 F 377 100.00 428 accept 0 ALIGNMENT 0 YS2-2m24.p1k chr02 410 428 205110 205109 F 19 0.00 428 accept 0 ALIGNMENT 271 YS2-2m24.q1k chr02 382 54 204784 205109 C 329 95.14 1604 accept 0 ALIGNMENT 259 YS2-2n01.q1k vc_7 367 1 2207 2569 C 367 91.01 739 reject_vc 3 ALIGNMENT 252 YS2-2n01.q1k vc_4 367 1 5290 5654 C 367 90.46 739 reject_vc 4 ALIGNMENT 0 YS2-2n01.p1k chr08 329 347 552004 552003 F 19 0.00 347 ambiguous_tel 0 ALIGNMENT 43 YS2-2n01.q1k vc_4 302 237 49 114 C 66 89.39 739 reject_vc 9 ALIGNMENT 242 YS2-2n01.q1k vc_2 1 302 2322 2622 F 302 93.71 739 reject_vc 6 ALIGNMENT 43 YS2-2n01.q1k vc_4 302 237 6276 6341 C 66 89.39 739 reject_vc 11 ALIGNMENT 259 YS2-2n01.q1k vc_5 1 367 2556 2918 F 367 91.01 739 reject_vc 2 ALIGNMENT 43 YS2-2n01.q1k vc_4 237 302 1546 1611 F 66 89.39 739 reject_vc 10 ALIGNMENT 242 YS2-2n01.q1k vc_1 1 302 2689 2989 F 302 93.71 739 reject_vc 5 ALIGNMENT 0 YS2-2n01.q1k vc_7 53 54 5172 6360 C 0 0.00 739 reject_vc 8 ALIGNMENT 191 YS2-2n01.q1k vc_7 302 53 4924 5172 C 250 92.40 739|0,1 reject_vc 8 ALIGNMENT 242 YS2-2n01.q1k vc_3 1 302 2689 2989 F 302 93.71 739 reject_vc 7 ALIGNMENT 279 YS2-2n01.p1k chr08 38 328 551714 552004 F 291 100.00 347 ambiguous_tel 0 ALIGNMENT 48 YS2-2n01.q1k vc_7 54 3 6360 6411 C 52 98.08 739|1,0 reject_vc 8 ALIGNMENT 270 YS2-2n01.p1k chr01 38 328 225068 225356 F 291 99.31 347 ambiguous_tel 1 ALIGNMENT 0 YS2-2n01.p1k chr01 329 347 225356 225355 F 19 0.00 347 ambiguous_tel 1 ALIGNMENT 962 YS2-2n02.p1k chr12 1220 31 832957 834133 C 1190 94.96 1244 accept 0 ALIGNMENT 755 YS2-2n02.q1k chr12 31 934 829932 830827 F 904 95.69 1284 accept 0 ALIGNMENT 980 YS2-2n03.p1k chr02 33 1230 319555 320760 F 1198 95.41 1276 accept 0 ALIGNMENT 683 YS2-2n03.q1k chr02 867 1 323108 323967 C 867 93.66 1263 accept 0 ALIGNMENT 215 YS2-2n04.q1k vc_7 295 53 4930 5172 C 243 96.71 894|0,1 reject_vc 7 ALIGNMENT 270 YS2-2n04.q1k vc_2 1 295 2322 2616 F 295 97.63 894 reject_vc 5 ALIGNMENT 42 YS2-2n04.q1k vc_4 295 239 55 112 C 57 92.98 894 reject_vc 8 ALIGNMENT 292 YS2-2n04.q1k vc_7 434 1 2149 2569 C 434 91.24 894 reject_vc 2 ALIGNMENT 42 YS2-2n04.q1k vc_4 239 295 1548 1605 F 57 92.98 894 reject_vc 9 ALIGNMENT 0 YS2-2n04.q1k vc_4 238 62 113 112 C 177 0.00 894 reject_vc 8 ALIGNMENT 0 YS2-2n04.q1k vc_4 62 238 1548 1547 F 177 0.00 894 reject_vc 9 ALIGNMENT 0 YS2-2n04.q1k vc_4 238 62 6340 6339 C 177 0.00 894 reject_vc 10 ALIGNMENT 0 YS2-2n04.q1k vc_7 53 54 5172 6360 C 0 0.00 894 reject_vc 7 ALIGNMENT 51 YS2-2n04.q1k vc_7 54 3 6360 6411 C 52 100.00 894|1,0 reject_vc 7 ALIGNMENT 292 YS2-2n04.q1k vc_5 1 434 2556 2976 F 434 91.24 894 reject_vc 1 ALIGNMENT 270 YS2-2n04.q1k vc_3 1 295 2689 2983 F 295 97.63 894 reject_vc 6 ALIGNMENT 270 YS2-2n04.q1k vc_1 1 295 2689 2983 F 295 97.63 894 reject_vc 4 ALIGNMENT 285 YS2-2n04.q1k vc_4 434 1 5232 5654 C 434 90.78 894 reject_vc 3 ALIGNMENT 42 YS2-2n04.q1k vc_4 295 239 6282 6339 C 57 92.98 894 reject_vc 10 ALIGNMENT 0 YS2-2n04.p1k chr02 286 304 177954 177953 F 19 0.00 304 accept 0 ALIGNMENT 231 YS2-2n04.p1k chr02 39 285 177708 177954 F 247 100.00 304 accept 0 ALIGNMENT 0 YS2-2n05.p1k chr13 242 225 879460 879459 C 18 0.00 242 accept 0 ALIGNMENT 194 YS2-2n05.p1k chr13 224 30 879459 879653 C 195 100.00 242 accept 0 ALIGNMENT 55 YS2-2n06.p1k chr15 1011 1085 663807 663885 F 75 92.00 1222 reject_low 9 ALIGNMENT 55 YS2-2n06.p1k chr11 1086 1019 379322 379392 C 68 94.12 1222 reject_low 10 ALIGNMENT 54 YS2-2n06.p1k chr07 1019 1085 412301 412370 F 67 94.03 1222 reject_low 11 ALIGNMENT 936 YS2-2n06.p1k chr13 29 1182 585643 586811 F 1154 95.06 1222 accept_chi 0 ALIGNMENT 56 YS2-2n06.p1k chr11 1010 1085 307783 307862 F 76 92.11 1222 reject_low 8 ALIGNMENT 57 YS2-2n06.p1k chr05 1086 1010 438695 438775 C 77 92.21 1222 reject_low 5 ALIGNMENT 813 YS2-2n06.q1k chr12 978 27 647438 648380 C 952 96.32 1338 accept_chi 1 ALIGNMENT 60 YS2-2n06.p1k chr12 1010 1086 687855 687935 F 77 93.51 1222 reject_low 3 ALIGNMENT 64 YS2-2n06.p1k chr07 1085 1005 823487 823571 C 81 93.83 1222 reject_low 2 ALIGNMENT 0 YS2-2n06.p1k chr07 1004 62 823572 823571 C 943 0.00 1222 reject_low 2 ALIGNMENT 0 YS2-2n06.p1k chr13 62 1009 372438 372437 F 948 0.00 1222 reject_low 4 ALIGNMENT 57 YS2-2n06.p1k chr10 1086 1010 378275 378355 C 77 92.21 1222 reject_low 6 ALIGNMENT 0 YS2-2n06.p1k chr07 62 1018 412301 412300 F 957 0.00 1222 reject_low 11 ALIGNMENT 0 YS2-2n06.p1k chr15 62 1010 663807 663806 F 949 0.00 1222 reject_low 9 ALIGNMENT 0 YS2-2n06.p1k chr10 1009 62 378356 378355 C 948 0.00 1222 reject_low 6 ALIGNMENT 0 YS2-2n06.p1k chr07 62 1009 73822 73821 F 948 0.00 1222 reject_low 7 ALIGNMENT 0 YS2-2n06.p1k chr11 1018 62 379393 379392 C 957 0.00 1222 reject_low 10 ALIGNMENT 56 YS2-2n06.p1k chr07 1010 1085 73822 73901 F 76 92.11 1222 reject_low 7 ALIGNMENT 0 YS2-2n06.p1k chr12 62 1009 687855 687854 F 948 0.00 1222 reject_low 3 ALIGNMENT 59 YS2-2n06.p1k chr13 1010 1085 372438 372517 F 76 93.42 1222 reject_low 4 ALIGNMENT 0 YS2-2n06.p1k chr11 62 1009 307783 307782 F 948 0.00 1222 reject_low 8 ALIGNMENT 0 YS2-2n06.p1k chr05 1009 62 438776 438775 C 948 0.00 1222 reject_low 5 ALIGNMENT 825 YS2-2n07.q1k chr06 1026 32 131166 132153 C 995 95.68 1351 accept 0 ALIGNMENT 950 YS2-2n07.p1k chr06 25 1159 127499 128640 F 1135 95.86 1323 accept 0 ALIGNMENT 167 YS2-2n08.p1k chr13 195 743 387284 387828 F 549 77.41 1354 reject_bad_break 0 ALIGNMENT 22 YS2-2n08.p1k chr13 814 868 387902 387957 F 55 81.82 1354 reject_bad_break 0 ALIGNMENT 0 YS2-2n08.p1k chr13 744 813 387829 387901 F 70 0.00 1354 reject_bad_break 0 ALIGNMENT 183 YS2-2n09.p1k vc_5 1218 839 4628 5025 C 380 84.21 1316 reject_low 6 ALIGNMENT 0 YS2-2n09.p1k vc_4 62 838 5871 5870 F 777 0.00 1316 reject_low 9 ALIGNMENT 0 YS2-2n09.p1k vc_7 62 838 100 99 F 777 0.00 1316 reject_low 7 ALIGNMENT 183 YS2-2n09.p1k vc_2 1218 839 1708 2105 C 380 84.21 1316 reject_low 4 ALIGNMENT 0 YS2-2n09.p1k vc_5 838 62 5026 5025 C 777 0.00 1316 reject_low 6 ALIGNMENT 0 YS2-2n09.p1k vc_1 838 62 2473 2472 C 777 0.00 1316 reject_low 10 ALIGNMENT 183 YS2-2n09.p1k vc_7 839 1214 100 492 F 376 84.84 1316 reject_low 7 ALIGNMENT 183 YS2-2n09.p1k vc_3 1218 839 1708 2105 C 380 84.21 1316 reject_low 5 ALIGNMENT 183 YS2-2n09.p1k vc_7 839 1214 13562 13954 F 376 84.84 1316 reject_low 8 ALIGNMENT 26 YS2-2n09.p1k vc_1 869 839 2441 2472 C 31 96.77 1316 reject_low 10 ALIGNMENT 183 YS2-2n09.p1k vc_1 1218 839 1708 2105 C 380 84.21 1316 reject_low 3 ALIGNMENT 0 YS2-2n09.p1k vc_2 838 62 2106 2105 C 777 0.00 1316 reject_low 4 ALIGNMENT 760 YS2-2n09.q1k chr12 819 31 232817 233602 C 789 99.11 1338 accept 0 ALIGNMENT 0 YS2-2n09.p1k vc_7 62 838 13562 13561 F 777 0.00 1316 reject_low 8 ALIGNMENT 0 YS2-2n09.p1k vc_1 838 62 2106 2105 C 777 0.00 1316 reject_low 3 ALIGNMENT 792 YS2-2n09.p1k chr12 28 821 232810 233603 F 794 100.00 1316 accept 0 ALIGNMENT 436 YS2-2n09.p1k chr12 821 48 411203 411976 C 774 85.53 1316 reject_low 1 ALIGNMENT 420 YS2-2n09.q1k chr12 31 752 411204 411925 F 722 86.15 1338 reject_low 2 ALIGNMENT 179 YS2-2n09.p1k vc_4 839 1174 5871 6219 F 336 85.42 1316 reject_low 9 ALIGNMENT 0 YS2-2n09.p1k vc_3 838 62 2473 2472 C 777 0.00 1316 reject_low 11 ALIGNMENT 0 YS2-2n09.p1k vc_3 838 62 2106 2105 C 777 0.00 1316 reject_low 5 ALIGNMENT 26 YS2-2n09.p1k vc_3 869 839 2441 2472 C 31 96.77 1316 reject_low 11 ALIGNMENT 0 YS2-2n10.p1k chr06 844 522 224539 224538 C 323 0.00 1256 reject_low 13 ALIGNMENT 25 YS2-2n10.p1k chr04 531 464 1038629 1038696 C 68 80.88 1256 reject_low 14 ALIGNMENT 0 YS2-2n10.p1k chr15 555 556 427877 427942 C 0 0.00 1256 reject_bad_break 0 ALIGNMENT 0 YS2-2n10.p1k chr07 62 469 394460 394459 F 408 0.00 1256 reject_low 10 ALIGNMENT 0 YS2-2n10.p1k chr04 844 532 1038630 1038629 C 313 0.00 1256 reject_low 14 ALIGNMENT 0 YS2-2n10.p1k chr15 317 62 428181 428180 C 256 0.00 1256 reject_low 1 ALIGNMENT 0 YS2-2n10.p1k chr05 844 498 309000 308999 C 347 0.00 1256 reject_low 16 ALIGNMENT 0 YS2-2n10.p1k chr13 62 457 354176 354175 F 396 0.00 1256 reject_low 15 ALIGNMENT 126 YS2-2n10.p1k chr15 454 318 428044 428180 C 137 100.00 1256 reject_low 1 ALIGNMENT 0 YS2-2n10.p1k chr04 463 62 1038697 1038696 C 402 0.00 1256 reject_low 14 ALIGNMENT 24 YS2-2n10.p1k chr07 562 473 529970 530058 C 90 80.00 1256 reject_low 9 ALIGNMENT 0 YS2-2n10.p1k chr13 62 439 248115 248114 F 378 0.00 1256 reject_low 4 ALIGNMENT 0 YS2-2n10.p1k chr08 844 558 252853 252852 C 287 0.00 1256 reject_low 5 ALIGNMENT 46 YS2-2n10.p1k chr08 559 464 365358 365453 C 96 85.42 1256 reject_low 2 ALIGNMENT 0 YS2-2n10.p1k chr15 844 553 427986 427985 C 292 0.00 1256 reject_low 7 ALIGNMENT 0 YS2-2n10.p1k chr08 442 62 252967 252966 C 381 0.00 1256 reject_low 5 ALIGNMENT 462 YS2-2n10.p1k chr15 1021 455 427399 427977 C 567 94.89 1256 reject_low 1 ALIGNMENT 29 YS2-2n10.p1k chr08 482 443 365360 365399 C 40 92.50 1256 reject_low 8 ALIGNMENT 21 YS2-2n10.p1k chr07 443 474 394469 394500 F 32 90.62 1256 reject_low 11 ALIGNMENT 0 YS2-2n10.p1k chr11 844 549 576113 576112 C 296 0.00 1256 reject_low 3 ALIGNMENT 479 YS2-2n10.p1k chr15 555 31 427943 428466 C 525 98.10 1256 reject_bad_break 0 ALIGNMENT 0 YS2-2n10.p1k chr11 458 62 576202 576201 C 397 0.00 1256 reject_low 3 ALIGNMENT 0 YS2-2n10.p1k chr08 442 62 365400 365399 C 381 0.00 1256 reject_low 8 ALIGNMENT 0 YS2-2n10.p1k chr15 481 62 428056 428055 C 420 0.00 1256 reject_low 7 ALIGNMENT 0 YS2-2n10.p1k chr15 844 522 427876 427875 C 323 0.00 1256 reject_low 12 ALIGNMENT 0 YS2-2n10.p1k chr08 844 483 365361 365360 C 362 0.00 1256 reject_low 8 ALIGNMENT 0 YS2-2n10.p1k chr07 62 442 394469 394468 F 381 0.00 1256 reject_low 11 ALIGNMENT 0 YS2-2n10.p1k chr07 475 844 394500 394499 F 370 0.00 1256 reject_low 11 ALIGNMENT 0 YS2-2n10.p1k chr07 511 844 394500 394499 F 334 0.00 1256 reject_low 10 ALIGNMENT 36 YS2-2n10.p1k chr07 470 510 394460 394500 F 41 97.56 1256 reject_low 10 ALIGNMENT 28 YS2-2n10.p1k chr15 552 482 427985 428055 C 71 83.10 1256 reject_low 7 ALIGNMENT 34 YS2-2n10.p1k chr08 557 443 252852 252966 C 115 79.13 1256 reject_low 5 ALIGNMENT 587 YS2-2n10.q1k chr15 3 704 427241 427948 F 702 95.30 1243 reject_bad_break 0 ALIGNMENT 0 YS2-2n10.p1k chr15 454 455 427978 428043 C 0 0.00 1256 reject_low 1 ALIGNMENT 0 YS2-2n10.p1k chr06 452 62 224607 224606 C 391 0.00 1256 reject_low 13 ALIGNMENT 0 YS2-2n10.p1k chr07 62 457 70163 70162 F 396 0.00 1256 reject_low 6 ALIGNMENT 27 YS2-2n10.p1k chr06 521 453 224538 224606 C 69 81.16 1256 reject_low 13 ALIGNMENT 0 YS2-2n10.p1k chr13 499 844 248173 248172 F 346 0.00 1256 reject_low 4 ALIGNMENT 44 YS2-2n10.p1k chr07 458 519 70163 70224 F 62 91.94 1256 reject_low 6 ALIGNMENT 27 YS2-2n10.p1k chr15 521 449 427875 427947 C 73 80.82 1256 reject_low 12 ALIGNMENT 44 YS2-2n10.p1k chr11 548 459 576112 576201 C 90 85.56 1256 reject_low 3 ALIGNMENT 0 YS2-2n10.p1k chr07 844 563 529971 529970 C 282 0.00 1256 reject_low 9 ALIGNMENT 0 YS2-2n10.p1k chr07 472 62 530059 530058 C 411 0.00 1256 reject_low 9 ALIGNMENT 27 YS2-2n10.p1k chr13 458 498 354176 354216 F 41 90.24 1256 reject_low 15 ALIGNMENT 0 YS2-2n10.p1k chr08 463 62 365454 365453 C 402 0.00 1256 reject_low 2 ALIGNMENT 24 YS2-2n10.p1k chr05 497 469 308999 309027 C 29 96.55 1256 reject_low 16 ALIGNMENT 52 YS2-2n10.p1k chr15 613 556 427819 427876 C 58 100.00 1256 reject_bad_break 0 ALIGNMENT 0 YS2-2n10.p1k chr05 468 62 309028 309027 C 407 0.00 1256 reject_low 16 ALIGNMENT 0 YS2-2n10.p1k chr15 844 614 427820 427819 C 231 0.00 1256 reject_bad_break 0 ALIGNMENT 0 YS2-2n10.p1k chr15 448 62 427948 427947 C 387 0.00 1256 reject_low 12 ALIGNMENT 0 YS2-2n10.p1k chr13 499 844 354216 354215 F 346 0.00 1256 reject_low 15 ALIGNMENT 0 YS2-2n10.p1k chr08 844 560 365359 365358 C 285 0.00 1256 reject_low 2 ALIGNMENT 0 YS2-2n10.p1k chr07 520 844 70224 70223 F 325 0.00 1256 reject_low 6 ALIGNMENT 37 YS2-2n10.p1k chr13 440 498 248115 248173 F 59 89.83 1256 reject_low 4 ALIGNMENT 805 YS2-2n11.q1k chr14 32 1026 203772 204761 F 995 94.57 1366 accept 0 ALIGNMENT 1008 YS2-2n11.p1k chr14 1239 32 204401 205607 C 1208 94.87 1274 accept 0 ALIGNMENT 43 YS2-2n12.p1k chrm 531 617 62820 62903 F 87 87.36 1252 reject_low 4 ALIGNMENT 76 YS2-2n12.q1k chrm 426 531 85674 85779 F 106 97.17 1274 reject_bad_break 1 ALIGNMENT 40 YS2-2n12.p1k chrm 574 630 10744 10799 F 57 91.23 1252 reject_low 7 ALIGNMENT 35 YS2-2n12.p1k chrm 576 638 10394 10456 F 63 87.30 1252 reject_low 8 ALIGNMENT 0 YS2-2n12.p1k chrm 701 62 85780 85779 C 640 0.00 1252 reject_low 2 ALIGNMENT 0 YS2-2n12.p1k chrm 62 573 10744 10743 F 512 0.00 1252 reject_low 7 ALIGNMENT 0 YS2-2n12.p1k chrm 618 892 11088 11087 F 275 0.00 1252 reject_low 9 ALIGNMENT 0 YS2-2n12.p1k chrm 892 701 3 2 C 192 0.00 1252 accept_chi 0 ALIGNMENT 0 YS2-2n12.q1k chrm 410 425 85601 85673 F 16 0.00 1274 reject_bad_break 1 ALIGNMENT 33 YS2-2n12.q1k chrm 379 441 66983 67045 F 63 85.71 1274 reject_low 3 ALIGNMENT 56 YS2-2n12.p1k chrm 562 634 83040 83113 F 73 93.15 1252 reject_low 5 ALIGNMENT 0 YS2-2n12.q1k chrm 62 378 66983 66982 F 317 0.00 1274 reject_low 3 ALIGNMENT 0 YS2-2n12.p1k chrm 62 575 10394 10393 F 514 0.00 1252 reject_low 8 ALIGNMENT 0 YS2-2n12.p1k chrm 62 530 62820 62819 F 469 0.00 1252 reject_low 4 ALIGNMENT 0 YS2-2n12.p1k chrm 804 805 85625 85676 C 0 0.00 1252 reject_low 2 ALIGNMENT 0 YS2-2n12.p1k chrm 200 189 490 621 C 12 0.00 1252 accept_chi 0 ALIGNMENT 0 YS2-2n12.p1k chrm 639 892 10456 10455 F 254 0.00 1252 reject_low 8 ALIGNMENT 278 YS2-2n12.p1k chrm 700 201 2 489 C 500 95.60 1252 accept_chi 0 ALIGNMENT 40 YS2-2n12.p1k chrm 570 617 11041 11088 F 48 95.83 1252 reject_low 9 ALIGNMENT 39 YS2-2n12.p1k chrm 659 565 56984 57082 C 95 83.16 1252 reject_low 6 ALIGNMENT 0 YS2-2n12.q1k chrm 62 81 85261 85260 F 20 0.00 1274 reject_bad_break 1 ALIGNMENT 0 YS2-2n12.p1k chrm 62 561 83040 83039 F 500 0.00 1252 reject_low 5 ALIGNMENT 0 YS2-2n12.p1k chrm 631 892 10799 10798 F 262 0.00 1252 reject_low 7 ALIGNMENT 0 YS2-2n12.p1k chrm 564 62 57083 57082 C 503 0.00 1252 reject_low 6 ALIGNMENT 174 YS2-2n12.q1k chrm 82 409 85261 85600 F 328 94.82 1274 reject_bad_break 1 ALIGNMENT 0 YS2-2n12.p1k chrm 62 569 11041 11040 F 508 0.00 1252 reject_low 9 ALIGNMENT 0 YS2-2n12.p1k chrm 892 660 56985 56984 C 233 0.00 1252 reject_low 6 ALIGNMENT 0 YS2-2n12.p1k chrm 635 892 83113 83112 F 258 0.00 1252 reject_low 5 ALIGNMENT 115 YS2-2n12.p1k chrm 188 30 622 778 C 159 96.86 1252 accept_chi 0 ALIGNMENT 83 YS2-2n12.p1k chrm 807 702 85674 85779 C 106 100.00 1252|3,0 reject_low 2 ALIGNMENT 78 YS2-2n12.p1k chrm 929 802 85495 85627 C 128 90.62 1252|0,3 reject_low 2 ALIGNMENT 0 YS2-2n12.p1k chrm 618 892 62903 62902 F 275 0.00 1252 reject_low 4 ALIGNMENT 726 YS2-2n13.q1k chr02 954 16 772381 773308 C 939 94.14 1315 accept 0 ALIGNMENT 914 YS2-2n13.p1k chr02 26 1161 771874 773028 F 1136 94.63 1292 accept 0 ALIGNMENT 0 YS2-2n14.q1k vc_1 62 532 2532 2531 F 471 0.00 1319 reject_low 5 ALIGNMENT 0 YS2-2n14.q1k vc_3 62 532 2532 2531 F 471 0.00 1319 reject_low 6 ALIGNMENT 0 YS2-2n14.q1k vc_7 532 62 2727 2726 C 471 0.00 1319 reject_low 4 ALIGNMENT 458 YS2-2n14.q1k chr05 6 490 375584 376067 F 485 98.76 1319 accept_chi 1 ALIGNMENT 0 YS2-2n14.q1k vc_4 532 62 1534 1533 C 471 0.00 1319 reject_low 10 ALIGNMENT 0 YS2-2n14.q1k vc_4 62 532 127 126 F 471 0.00 1319 reject_low 7 ALIGNMENT 83 YS2-2n14.q1k vc_4 533 700 6354 6514 F 168 86.31 1319 reject_low 2 ALIGNMENT 83 YS2-2n14.q1k vc_3 533 700 2532 2692 F 168 86.31 1319 reject_low 6 ALIGNMENT 476 YS2-2n14.p1k chr05 530 34 375565 376062 C 497 99.20 549 accept_chi 0 ALIGNMENT 83 YS2-2n14.q1k vc_1 533 700 2532 2692 F 168 86.31 1319 reject_low 5 ALIGNMENT 0 YS2-2n14.q1k vc_1 490 62 2513 2512 C 429 0.00 1319 reject_low 8 ALIGNMENT 28 YS2-2n14.q1k vc_4 491 529 5831 5868 F 39 92.31 1319 reject_low 2 ALIGNMENT 0 YS2-2n14.q1k vc_4 530 532 5869 6353 F 3 0.00 1319 reject_low 2 ALIGNMENT 28 YS2-2n14.q1k vc_1 529 491 2475 2512 C 39 92.31 1319 reject_low 8 ALIGNMENT 0 YS2-2n14.p1k chr05 549 531 375566 375565 C 19 0.00 549 accept_chi 0 ALIGNMENT 28 YS2-2n14.q1k vc_3 529 491 2475 2512 C 39 92.31 1319 reject_low 9 ALIGNMENT 0 YS2-2n14.q1k vc_3 490 62 2513 2512 C 429 0.00 1319 reject_low 9 ALIGNMENT 0 YS2-2n14.q1k vc_4 62 490 5831 5830 F 429 0.00 1319 reject_low 2 ALIGNMENT 0 YS2-2n14.q1k vc_4 532 62 5812 5811 C 471 0.00 1319 reject_low 3 ALIGNMENT 84 YS2-2n14.q1k vc_7 700 533 2566 2726 C 168 86.31 1319 reject_low 4 ALIGNMENT 63 YS2-2n14.q1k vc_4 621 533 1448 1533 C 89 93.26 1319 reject_low 10 ALIGNMENT 84 YS2-2n14.q1k vc_4 700 533 5651 5811 C 168 86.31 1319 reject_low 3 ALIGNMENT 83 YS2-2n14.q1k vc_4 533 700 127 287 F 168 86.31 1319 reject_low 7 ALIGNMENT 839 YS2-2n15.q1k chr04 28 1055 661664 662675 F 1028 95.82 1268 accept 0 ALIGNMENT 523 YS2-2n15.p1k chr04 922 170 665296 666037 C 753 89.64 1211 accept 0 ALIGNMENT 720 YS2-2n16.q1k chr02 893 30 600846 601703 C 864 96.06 1297 accept 0 ALIGNMENT 851 YS2-2n16.p1k chr02 29 1089 597201 598265 F 1061 95.29 1317 accept 0 ALIGNMENT 252 YS2-2n17.q1k vc_4 623 272 5464 5812 C 352 92.05 1377 reject_vc 7 ALIGNMENT 41 YS2-2n17.q1k vc_7 484 433 6360 6411 C 52 94.23 1377 reject_low 11 ALIGNMENT 153 YS2-2n17.q1k vc_4 272 434 6353 6514 F 163 98.77 1377|1,0 reject_low 9 ALIGNMENT 159 YS2-2n17.p1k chr13 204 34 583760 583930 C 171 99.42 211 accept_chi 1 ALIGNMENT 0 YS2-2n17.q1k vc_3 417 273 2473 2472 C 145 0.00 1377 reject_low 14 ALIGNMENT 257 YS2-2n17.q1k vc_5 272 623 2398 2744 F 352 92.33 1377 reject_vc 5 ALIGNMENT 40 YS2-2n17.q1k vc_4 233 272 5832 5871 F 40 100.00 1377 reject_low 9 ALIGNMENT 85 YS2-2n17.q1k vc_4 360 272 1446 1534 C 89 98.88 1377 reject_low 10 ALIGNMENT 0 YS2-2n17.q1k vc_4 77 232 5832 5831 F 156 0.00 1377 reject_low 9 ALIGNMENT 257 YS2-2n17.q1k vc_1 272 623 2531 2877 F 352 92.33 1377 reject_vc 2 ALIGNMENT 0 YS2-2n17.q1k vc_2 77 271 2164 2163 F 195 0.00 1377 reject_vc 3 ALIGNMENT 0 YS2-2n17.q1k vc_1 417 273 2473 2472 C 145 0.00 1377 reject_low 12 ALIGNMENT 160 YS2-2n17.q1k chr13 51 232 583760 583940 F 182 98.35 1377 accept_chi 0 ALIGNMENT 0 YS2-2n17.q1k vc_5 233 77 37 36 C 157 0.00 1377 reject_low 18 ALIGNMENT 153 YS2-2n17.q1k vc_4 272 434 126 287 F 163 98.77 1377 reject_low 8 ALIGNMENT 40 YS2-2n17.q1k vc_3 272 233 2472 2511 C 40 100.00 1377 reject_low 14 ALIGNMENT 0 YS2-2n17.q1k vc_5 233 77 5064 5063 C 157 0.00 1377 reject_low 15 ALIGNMENT 0 YS2-2n17.q1k vc_7 77 234 63 62 F 158 0.00 1377 reject_low 16 ALIGNMENT 0 YS2-2n17.q1k vc_5 77 271 2398 2397 F 195 0.00 1377 reject_vc 5 ALIGNMENT 0 YS2-2n17.q1k vc_4 271 77 1535 1534 C 195 0.00 1377 reject_low 10 ALIGNMENT 0 YS2-2n17.q1k vc_7 271 77 2728 2727 C 195 0.00 1377 reject_vc 6 ALIGNMENT 61 YS2-2n17.q1k vc_7 623 486 5036 5169 C 138 84.06 1377 reject_low 11 ALIGNMENT 0 YS2-2n17.q1k vc_4 77 271 126 125 F 195 0.00 1377 reject_low 8 ALIGNMENT 38 YS2-2n17.q1k vc_7 235 272 63 100 F 38 100.00 1377 reject_low 16 ALIGNMENT 0 YS2-2n17.q1k vc_2 417 273 2106 2105 C 145 0.00 1377 reject_low 13 ALIGNMENT 0 YS2-2n17.q1k vc_7 273 417 13562 13561 F 145 0.00 1377 reject_low 17 ALIGNMENT 0 YS2-2n17.q1k vc_5 417 273 5026 5025 C 145 0.00 1377 reject_low 15 ALIGNMENT 257 YS2-2n17.q1k vc_2 272 623 2164 2510 F 352 92.33 1377 reject_vc 3 ALIGNMENT 0 YS2-2n17.q1k vc_5 417 270 2 1 C 148 0.00 1377 reject_low 18 ALIGNMENT 0 YS2-2n17.q1k vc_7 273 417 100 99 F 145 0.00 1377 reject_low 16 ALIGNMENT 0 YS2-2n17.q1k vc_3 232 77 2512 2511 C 156 0.00 1377 reject_low 14 ALIGNMENT 36 YS2-2n17.q1k vc_5 269 234 1 36 C 36 100.00 1377 reject_low 18 ALIGNMENT 0 YS2-2n17.q1k chr13 233 417 583940 583939 F 185 0.00 1377 accept_chi 0 ALIGNMENT 38 YS2-2n17.q1k vc_7 235 272 13525 13562 F 38 100.00 1377 reject_low 17 ALIGNMENT 39 YS2-2n17.q1k vc_5 272 234 5025 5063 C 39 100.00 1377 reject_low 15 ALIGNMENT 257 YS2-2n17.q1k vc_7 623 272 2381 2727 C 352 92.33 1377 reject_vc 6 ALIGNMENT 0 YS2-2n17.q1k vc_7 485 485 5170 6359 C 1 0.00 1377 reject_low 11 ALIGNMENT 0 YS2-2n17.q1k vc_7 77 234 13525 13524 F 158 0.00 1377 reject_low 17 ALIGNMENT 0 YS2-2n17.q1k vc_4 417 361 1447 1446 C 57 0.00 1377 reject_low 10 ALIGNMENT 40 YS2-2n17.q1k vc_1 272 233 2472 2511 C 40 100.00 1377 reject_low 12 ALIGNMENT 0 YS2-2n17.q1k vc_1 77 271 2531 2530 F 195 0.00 1377 reject_vc 2 ALIGNMENT 0 YS2-2n17.q1k vc_7 432 77 6412 6411 C 356 0.00 1377 reject_low 11 ALIGNMENT 257 YS2-2n17.q1k vc_3 272 623 2531 2877 F 352 92.33 1377 reject_vc 4 ALIGNMENT 0 YS2-2n17.q1k vc_1 232 77 2512 2511 C 156 0.00 1377 reject_low 12 ALIGNMENT 0 YS2-2n17.q1k vc_4 273 272 5872 6353 F 0 0.00 1377 reject_low 9 ALIGNMENT 0 YS2-2n17.q1k vc_3 77 271 2531 2530 F 195 0.00 1377 reject_vc 4 ALIGNMENT 0 YS2-2n17.q1k vc_4 271 77 5813 5812 C 195 0.00 1377 reject_vc 7 ALIGNMENT 40 YS2-2n17.q1k vc_2 272 233 2105 2144 C 40 100.00 1377 reject_low 13 ALIGNMENT 0 YS2-2n17.q1k vc_2 232 77 2145 2144 C 156 0.00 1377 reject_low 13 ALIGNMENT 969 YS2-2n18.p1k chr02 1227 29 584399 585586 C 1199 94.33 1332 accept 0 ALIGNMENT 703 YS2-2n18.q1k chr02 2 945 583319 584285 F 944 92.58 1227 accept 0 ALIGNMENT 891 YS2-2n19.p1k chr04 32 1046 1293816 1294835 F 1015 96.06 1232 accept 0 ALIGNMENT 773 YS2-2n19.q1k chr04 946 32 1295685 1296588 C 915 96.50 1274 accept 0 ALIGNMENT 46 YS2-2n22.q1k vc_4 710 804 6353 6447 F 95 83.16 1264|1,0 reject_low 8 ALIGNMENT 37 YS2-2n22.q1k vc_3 710 670 2472 2512 C 41 97.56 1264 reject_low 10 ALIGNMENT 0 YS2-2n22.q1k vc_4 709 62 1535 1534 C 648 0.00 1264 reject_low 7 ALIGNMENT 0 YS2-2n22.q1k vc_1 62 709 2531 2530 F 648 0.00 1264 reject_low 2 ALIGNMENT 0 YS2-2n22.q1k vc_4 62 709 126 125 F 648 0.00 1264 reject_low 4 ALIGNMENT 43 YS2-2n22.q1k vc_4 792 710 1452 1534 C 83 84.34 1264 reject_low 7 ALIGNMENT 36 YS2-2n22.q1k vc_5 710 672 5025 5063 C 39 97.44 1264 reject_low 11 ALIGNMENT 0 YS2-2n22.q1k vc_5 671 62 5064 5063 C 610 0.00 1264 reject_low 11 ALIGNMENT 37 YS2-2n22.q1k vc_1 710 670 2472 2512 C 41 97.56 1264 reject_low 9 ALIGNMENT 33 YS2-2n22.q1k vc_5 707 672 1 36 C 36 97.22 1264 reject_low 13 ALIGNMENT 35 YS2-2n22.q1k vc_7 673 710 13525 13562 F 38 97.37 1264 reject_low 12 ALIGNMENT 0 YS2-2n22.q1k vc_3 669 62 2513 2512 C 608 0.00 1264 reject_low 10 ALIGNMENT 46 YS2-2n22.q1k vc_3 710 804 2531 2625 F 95 83.16 1264 reject_low 3 ALIGNMENT 46 YS2-2n22.q1k vc_4 804 710 5718 5812 C 95 83.16 1264 reject_low 5 ALIGNMENT 0 YS2-2n22.q1k vc_4 709 62 5813 5812 C 648 0.00 1264 reject_low 5 ALIGNMENT 46 YS2-2n22.q1k vc_1 710 804 2531 2625 F 95 83.16 1264 reject_low 2 ALIGNMENT 0 YS2-2n22.q1k vc_7 62 672 13525 13524 F 611 0.00 1264 reject_low 12 ALIGNMENT 46 YS2-2n22.q1k vc_5 710 804 2398 2492 F 95 83.16 1264 reject_low 6 ALIGNMENT 576 YS2-2n22.q1k chr09 31 669 330645 331284 F 639 98.12 1264 accept_chi 1 ALIGNMENT 0 YS2-2n22.q1k vc_5 62 709 2398 2397 F 648 0.00 1264 reject_low 6 ALIGNMENT 46 YS2-2n22.q1k vc_4 710 804 126 220 F 95 83.16 1264 reject_low 4 ALIGNMENT 0 YS2-2n22.q1k vc_4 711 710 5872 6353 F 0 0.00 1264 reject_low 8 ALIGNMENT 0 YS2-2n22.q1k vc_4 62 669 5831 5830 F 608 0.00 1264 reject_low 8 ALIGNMENT 0 YS2-2n22.q1k vc_3 62 709 2531 2530 F 648 0.00 1264 reject_low 3 ALIGNMENT 0 YS2-2n22.q1k vc_5 671 62 37 36 C 610 0.00 1264 reject_low 13 ALIGNMENT 605 YS2-2n22.p1k chr09 668 30 330645 331284 C 639 99.84 668 accept_chi 0 ALIGNMENT 0 YS2-2n22.q1k vc_1 669 62 2513 2512 C 608 0.00 1264 reject_low 9 ALIGNMENT 37 YS2-2n22.q1k vc_4 670 710 5831 5871 F 41 97.56 1264 reject_low 8 ALIGNMENT 38 YS2-2n23.q1k vc_7 250 287 13525 13562 F 38 100.00 287 reject_low 7 ALIGNMENT 0 YS2-2n23.q1k vc_2 246 62 2146 2145 C 185 0.00 287 reject_low 3 ALIGNMENT 0 YS2-2n23.q1k vc_7 62 249 13525 13524 F 188 0.00 287 reject_low 7 ALIGNMENT 0 YS2-2n23.q1k chr08 287 247 445686 445685 C 41 0.00 287 accept_chi 0 ALIGNMENT 41 YS2-2n23.q1k vc_3 287 247 2472 2512 C 41 100.00 287 reject_low 4 ALIGNMENT 0 YS2-2n23.q1k vc_5 248 62 37 36 C 187 0.00 287 reject_low 8 ALIGNMENT 39 YS2-2n23.q1k vc_5 287 249 5025 5063 C 39 100.00 287 reject_low 6 ALIGNMENT 41 YS2-2n23.q1k vc_4 247 287 5831 5871 F 41 100.00 287 reject_low 5 ALIGNMENT 0 YS2-2n23.q1k vc_1 246 62 2513 2512 C 185 0.00 287 reject_low 2 ALIGNMENT 193 YS2-2n23.p1k chr08 36 253 445685 445900 F 218 98.62 272 accept_chi 1 ALIGNMENT 0 YS2-2n23.q1k vc_5 248 62 5064 5063 C 187 0.00 287 reject_low 6 ALIGNMENT 0 YS2-2n23.q1k vc_3 246 62 2513 2512 C 185 0.00 287 reject_low 4 ALIGNMENT 36 YS2-2n23.q1k vc_5 284 249 1 36 C 36 100.00 287 reject_low 8 ALIGNMENT 41 YS2-2n23.q1k vc_2 287 247 2105 2145 C 41 100.00 287 reject_low 3 ALIGNMENT 196 YS2-2n23.q1k chr08 246 32 445685 445900 C 215 99.07 287 accept_chi 0 ALIGNMENT 0 YS2-2n23.q1k vc_4 62 246 5831 5830 F 185 0.00 287 reject_low 5 ALIGNMENT 41 YS2-2n23.q1k vc_1 287 247 2472 2512 C 41 100.00 287 reject_low 2 ALIGNMENT 0 YS2-2n23.p1k chr08 254 272 445900 445899 F 19 0.00 272 accept_chi 1 ALIGNMENT 302 YS2-2n24.p1k chr11 37 352 582429 582745 F 316 99.68 369 accept 0 ALIGNMENT 0 YS2-2n24.p1k chr11 353 369 582745 582744 F 17 0.00 369 accept 0 ALIGNMENT 0 YS2-2o02.p1k chr07 360 379 1005105 1005104 F 20 0.00 379 accept 0 ALIGNMENT 316 YS2-2o02.p1k chr07 38 359 1004783 1005105 F 322 99.69 379 accept 0 ALIGNMENT 729 YS2-2o03.q1k chr03 904 34 236486 237351 C 871 95.98 1257 accept 0 ALIGNMENT 876 YS2-2o03.p1k chr03 29 969 236411 237351 F 941 98.72 1239 accept 0 ALIGNMENT 0 YS2-2o04.q1k chr08 275 62 543942 543941 C 214 0.00 1307 reject_low 11 ALIGNMENT 59 YS2-2o04.q1k chr07 484 584 817289 817387 F 101 89.11 1307 reject_low 23 ALIGNMENT 645 YS2-2o04.q1k chr08 892 5 116147 117019 C 888 93.58 1307 accept 0 ALIGNMENT 0 YS2-2o04.q1k chr07 585 619 817387 817386 F 35 0.00 1307 reject_low 23 ALIGNMENT 247 YS2-2o04.q1k chr04 276 587 1095762 1096079 F 312 95.51 1307 reject_low 16 ALIGNMENT 0 YS2-2o04.q1k chr07 62 483 817289 817288 F 422 0.00 1307 reject_low 23 ALIGNMENT 0 YS2-2o04.q1k chr15 588 619 118019 118018 F 32 0.00 1307 reject_low 19 ALIGNMENT 0 YS2-2o04.q1k chr15 62 275 600403 600402 F 214 0.00 1307 reject_low 14 ALIGNMENT 287 YS2-2o04.q1k chr14 609 276 96608 96941 C 334 97.31 1307 reject_low 1 ALIGNMENT 0 YS2-2o04.q1k chr15 62 275 594821 594820 F 214 0.00 1307 reject_low 13 ALIGNMENT 189 YS2-2o04.q1k chr01 607 276 165827 166163 C 332 87.95 1307 reject_low 21 ALIGNMENT 247 YS2-2o04.q1k chr15 276 587 117702 118019 F 312 95.51 1307 reject_low 19 ALIGNMENT 272 YS2-2o04.q1k chr13 275 587 184169 184481 F 313 97.76 1307 reject_low 9 ALIGNMENT 247 YS2-2o04.q1k chr13 587 276 372716 373033 C 312 95.51 1307 reject_low 18 ALIGNMENT 283 YS2-2o04.q1k chr07 276 608 401962 402294 F 333 97.00 1307 reject_low 5 ALIGNMENT 916 YS2-2o04.p1k chr08 31 1116 113178 114278 F 1086 96.13 1195 accept 0 ALIGNMENT 0 YS2-2o04.q1k chr13 62 274 184169 184168 F 213 0.00 1307 reject_low 9 ALIGNMENT 0 YS2-2o04.q1k chr14 62 275 102549 102548 F 214 0.00 1307 reject_low 24 ALIGNMENT 0 YS2-2o04.q1k chr01 275 62 160576 160575 C 214 0.00 1307 reject_low 20 ALIGNMENT 0 YS2-2o04.q1k chr02 588 619 259887 259886 F 32 0.00 1307 reject_low 15 ALIGNMENT 0 YS2-2o04.q1k chr13 62 275 189752 189751 F 214 0.00 1307 reject_low 12 ALIGNMENT 0 YS2-2o04.q1k chr16 62 275 560478 560477 F 214 0.00 1307 reject_low 7 ALIGNMENT 0 YS2-2o04.q1k chr13 588 619 184481 184480 F 32 0.00 1307 reject_low 9 ALIGNMENT 0 YS2-2o04.q1k chr07 62 275 401962 401961 F 214 0.00 1307 reject_low 5 ALIGNMENT 0 YS2-2o04.q1k chr13 275 62 357336 357335 C 214 0.00 1307 reject_low 2 ALIGNMENT 0 YS2-2o04.q1k chr15 524 619 594759 594758 F 96 0.00 1307 reject_low 22 ALIGNMENT 285 YS2-2o04.q1k chr14 607 276 102192 102523 C 332 97.29 1307 reject_low 3 ALIGNMENT 0 YS2-2o04.q1k chr13 275 62 373034 373033 C 214 0.00 1307 reject_low 18 ALIGNMENT 247 YS2-2o04.q1k chr12 587 276 215101 215418 C 312 95.51 1307 reject_low 17 ALIGNMENT 267 YS2-2o04.q1k chr02 276 587 259576 259887 F 312 97.44 1307 reject_low 15 ALIGNMENT 189 YS2-2o04.q1k chr01 607 276 160239 160575 C 332 87.95 1307 reject_low 20 ALIGNMENT 0 YS2-2o04.q1k chr02 62 275 259576 259575 F 214 0.00 1307 reject_low 15 ALIGNMENT 0 YS2-2o04.q1k chr04 62 275 1095762 1095761 F 214 0.00 1307 reject_low 16 ALIGNMENT 0 YS2-2o04.q1k chr14 275 62 96942 96941 C 214 0.00 1307 reject_low 1 ALIGNMENT 281 YS2-2o04.q1k chr07 275 607 931690 932022 F 333 96.70 1307 reject_low 4 ALIGNMENT 0 YS2-2o04.q1k chr14 275 62 102524 102523 C 214 0.00 1307 reject_low 3 ALIGNMENT 280 YS2-2o04.q1k chr16 276 608 560478 560810 F 333 96.70 1307 reject_low 7 ALIGNMENT 0 YS2-2o04.q1k chr07 62 274 931690 931689 F 213 0.00 1307 reject_low 4 ALIGNMENT 0 YS2-2o04.q1k chr13 619 588 372717 372716 C 32 0.00 1307 reject_low 18 ALIGNMENT 0 YS2-2o04.q1k chr13 588 619 190063 190062 F 32 0.00 1307 reject_low 12 ALIGNMENT 270 YS2-2o04.q1k chr08 587 276 543630 543941 C 312 97.76 1307 reject_low 11 ALIGNMENT 270 YS2-2o04.q1k chr13 276 587 189752 190063 F 312 97.76 1307 reject_low 12 ALIGNMENT 29 YS2-2o04.q1k chr14 276 305 102549 102578 F 30 100.00 1307 reject_low 24 ALIGNMENT 270 YS2-2o04.q1k chr07 587 276 817418 817729 C 312 97.76 1307 reject_low 10 ALIGNMENT 0 YS2-2o04.q1k chr07 275 62 817730 817729 C 214 0.00 1307 reject_low 10 ALIGNMENT 281 YS2-2o04.q1k chr13 610 276 357001 357335 C 335 96.72 1307 reject_low 2 ALIGNMENT 0 YS2-2o04.q1k chr08 619 588 543631 543630 C 32 0.00 1307 reject_low 11 ALIGNMENT 270 YS2-2o04.q1k chr15 276 587 594821 595132 F 312 97.76 1307 reject_low 13 ALIGNMENT 0 YS2-2o04.q1k chr15 62 393 594630 594629 F 332 0.00 1307 reject_low 22 ALIGNMENT 0 YS2-2o04.q1k chr12 619 588 215102 215101 C 32 0.00 1307 reject_low 17 ALIGNMENT 0 YS2-2o04.q1k chr15 588 619 600714 600713 F 32 0.00 1307 reject_low 14 ALIGNMENT 0 YS2-2o04.q1k chr14 306 619 102578 102577 F 314 0.00 1307 reject_low 24 ALIGNMENT 0 YS2-2o04.q1k chr15 62 275 117702 117701 F 214 0.00 1307 reject_low 19 ALIGNMENT 0 YS2-2o04.q1k chr12 275 62 215419 215418 C 214 0.00 1307 reject_low 17 ALIGNMENT 0 YS2-2o04.q1k chr13 275 62 362918 362917 C 214 0.00 1307 reject_low 8 ALIGNMENT 0 YS2-2o04.q1k chr15 588 619 595132 595131 F 32 0.00 1307 reject_low 13 ALIGNMENT 279 YS2-2o04.q1k chr13 607 276 362586 362917 C 332 96.69 1307 reject_low 8 ALIGNMENT 0 YS2-2o04.q1k chr07 62 275 535215 535214 F 214 0.00 1307 reject_low 6 ALIGNMENT 0 YS2-2o04.q1k chr04 588 619 1096079 1096078 F 32 0.00 1307 reject_low 16 ALIGNMENT 73 YS2-2o04.q1k chr15 394 523 594630 594759 F 130 87.69 1307 reject_low 22 ALIGNMENT 0 YS2-2o04.q1k chr07 619 588 817419 817418 C 32 0.00 1307 reject_low 10 ALIGNMENT 270 YS2-2o04.q1k chr15 276 587 600403 600714 F 312 97.76 1307 reject_low 14 ALIGNMENT 278 YS2-2o04.q1k chr07 276 609 535215 535548 F 334 96.41 1307 reject_low 6 ALIGNMENT 0 YS2-2o04.q1k chr01 275 62 166164 166163 C 214 0.00 1307 reject_low 21 ALIGNMENT 0 YS2-2o05.q1k vc_7 181 62 2728 2727 C 120 0.00 1213 reject_vc 6 ALIGNMENT 0 YS2-2o05.p1k chr12 195 212 322172 322171 F 18 0.00 212 accept_chi 0 ALIGNMENT 0 YS2-2o05.q1k vc_1 141 62 2513 2512 C 80 0.00 1213 reject_vc 13 ALIGNMENT 0 YS2-2o05.q1k chr12 332 143 321999 321998 C 190 0.00 1213 accept_chi 1 ALIGNMENT 102 YS2-2o05.q1k chr12 142 22 321998 322118 C 121 95.04 1213 accept_chi 1 ALIGNMENT 295 YS2-2o05.q1k vc_1 182 572 2531 2915 F 391 93.35 1213 reject_vc 2 ALIGNMENT 41 YS2-2o05.q1k vc_1 182 142 2472 2512 C 41 100.00 1213 reject_vc 13 ALIGNMENT 0 YS2-2o05.q1k vc_7 341 62 6412 6411 C 280 0.00 1213 reject_vc 10 ALIGNMENT 0 YS2-2o05.q1k vc_1 62 181 2531 2530 F 120 0.00 1213 reject_vc 2 ALIGNMENT 38 YS2-2o05.q1k vc_7 145 182 13525 13562 F 38 100.00 1213 reject_vc 17 ALIGNMENT 0 YS2-2o05.q1k vc_7 62 144 13525 13524 F 83 0.00 1213 reject_vc 17 ALIGNMENT 159 YS2-2o05.q1k vc_4 182 343 6353 6514 F 162 100.00 1213|1,0 reject_vc 9 ALIGNMENT 0 YS2-2o05.q1k vc_4 62 181 126 125 F 120 0.00 1213 reject_vc 8 ALIGNMENT 0 YS2-2o05.q1k vc_2 332 183 2106 2105 C 150 0.00 1213 reject_vc 14 ALIGNMENT 41 YS2-2o05.q1k vc_3 182 142 2472 2512 C 41 100.00 1213 reject_vc 15 ALIGNMENT 0 YS2-2o05.q1k vc_5 136 62 44 43 C 75 0.00 1213 reject_vc 16 ALIGNMENT 41 YS2-2o05.q1k vc_2 182 142 2105 2145 C 41 100.00 1213 reject_vc 14 ALIGNMENT 0 YS2-2o05.q1k vc_5 332 183 5026 5025 C 150 0.00 1213 reject_vc 12 ALIGNMENT 90 YS2-2o05.q1k vc_7 572 392 4998 5172 C 181 86.19 1213|0,1 reject_vc 10 ALIGNMENT 0 YS2-2o05.q1k vc_3 141 62 2513 2512 C 80 0.00 1213 reject_vc 15 ALIGNMENT 0 YS2-2o05.q1k vc_3 62 181 2531 2530 F 120 0.00 1213 reject_vc 4 ALIGNMENT 288 YS2-2o05.q1k vc_4 572 182 5426 5812 C 391 92.84 1213 reject_vc 7 ALIGNMENT 87 YS2-2o05.q1k vc_4 270 182 1446 1534 C 89 100.00 1213 reject_vc 11 ALIGNMENT 139 YS2-2o05.p1k chr12 34 194 322010 322172 F 161 96.89 212 accept_chi 0 ALIGNMENT 40 YS2-2o05.q1k vc_5 182 137 5025 5070 C 46 95.65 1213 reject_vc 12 ALIGNMENT 0 YS2-2o05.q1k vc_4 62 141 5831 5830 F 80 0.00 1213 reject_vc 9 ALIGNMENT 0 YS2-2o05.q1k vc_2 62 181 2164 2163 F 120 0.00 1213 reject_vc 3 ALIGNMENT 46 YS2-2o05.q1k vc_7 393 342 6360 6411 C 52 96.15 1213|1,0 reject_vc 10 ALIGNMENT 0 YS2-2o05.q1k vc_1 332 183 2473 2472 C 150 0.00 1213 reject_vc 13 ALIGNMENT 295 YS2-2o05.q1k vc_5 182 572 2398 2782 F 391 93.35 1213 reject_vc 5 ALIGNMENT 159 YS2-2o05.q1k vc_4 182 343 126 287 F 162 100.00 1213 reject_vc 8 ALIGNMENT 0 YS2-2o05.q1k vc_7 183 332 13562 13561 F 150 0.00 1213 reject_vc 17 ALIGNMENT 0 YS2-2o05.q1k vc_4 183 182 5872 6353 F 0 0.00 1213 reject_vc 9 ALIGNMENT 0 YS2-2o05.q1k vc_5 136 62 5071 5070 C 75 0.00 1213 reject_vc 12 ALIGNMENT 0 YS2-2o05.q1k vc_4 181 62 5813 5812 C 120 0.00 1213 reject_vc 7 ALIGNMENT 295 YS2-2o05.q1k vc_7 572 182 2343 2727 C 391 93.35 1213 reject_vc 6 ALIGNMENT 37 YS2-2o05.q1k vc_5 179 137 1 43 C 43 95.35 1213 reject_vc 16 ALIGNMENT 0 YS2-2o05.q1k vc_4 181 62 1535 1534 C 120 0.00 1213 reject_vc 11 ALIGNMENT 295 YS2-2o05.q1k vc_3 182 572 2531 2915 F 391 93.35 1213 reject_vc 4 ALIGNMENT 0 YS2-2o05.q1k vc_3 332 183 2473 2472 C 150 0.00 1213 reject_vc 15 ALIGNMENT 0 YS2-2o05.q1k vc_5 62 181 2398 2397 F 120 0.00 1213 reject_vc 5 ALIGNMENT 295 YS2-2o05.q1k vc_2 182 572 2164 2548 F 391 93.35 1213 reject_vc 3 ALIGNMENT 0 YS2-2o05.q1k vc_4 332 271 1447 1446 C 62 0.00 1213 reject_vc 11 ALIGNMENT 0 YS2-2o05.q1k vc_5 332 180 2 1 C 153 0.00 1213 reject_vc 16 ALIGNMENT 0 YS2-2o05.q1k vc_7 392 393 5172 6360 C 0 0.00 1213 reject_vc 10 ALIGNMENT 41 YS2-2o05.q1k vc_4 142 182 5831 5871 F 41 100.00 1213 reject_vc 9 ALIGNMENT 0 YS2-2o05.q1k vc_2 141 62 2146 2145 C 80 0.00 1213 reject_vc 14 ALIGNMENT 68 YS2-2o06.p1k chr12 126 49 448646 448722 C 78 97.44 1293 reject_low 7 ALIGNMENT 70 YS2-2o06.p1k chr04 129 49 802717 802797 C 81 97.53 1293 reject_low 5 ALIGNMENT 0 YS2-2o06.p1k chr03 851 127 168292 168291 C 725 0.00 1293 reject_low 3 ALIGNMENT 0 YS2-2o06.p1k chr13 851 123 808245 808244 C 729 0.00 1293 reject_low 9 ALIGNMENT 941 YS2-2o06.p1k chr05 33 1195 250269 251442 F 1163 95.10 1293 accept 0 ALIGNMENT 71 YS2-2o06.p1k chr04 49 129 520968 521047 F 81 97.53 1293 reject_low 4 ALIGNMENT 0 YS2-2o06.p1k chr04 851 130 802718 802717 C 722 0.00 1293 reject_low 5 ALIGNMENT 75 YS2-2o06.p1k chr04 127 38 645142 645230 C 90 95.56 1293 reject_low 1 ALIGNMENT 0 YS2-2o06.p1k chr12 851 127 448647 448646 C 725 0.00 1293 reject_low 7 ALIGNMENT 0 YS2-2o06.p1k chr04 851 128 645143 645142 C 724 0.00 1293 reject_low 1 ALIGNMENT 0 YS2-2o06.p1k chr05 851 131 131074 131073 C 721 0.00 1293 reject_low 8 ALIGNMENT 0 YS2-2o06.p1k chr08 127 851 134390 134389 F 725 0.00 1293 reject_low 6 ALIGNMENT 60 YS2-2o06.p1k chr02 54 140 350830 350917 F 87 91.95 1293 reject_low 2 ALIGNMENT 572 YS2-2o06.q1k chr05 836 51 254287 255059 C 786 92.75 1347 accept 0 ALIGNMENT 56 YS2-2o06.p1k chr13 122 49 808244 808316 C 74 93.24 1293 reject_low 9 ALIGNMENT 0 YS2-2o06.p1k chr04 130 851 521047 521046 F 722 0.00 1293 reject_low 4 ALIGNMENT 0 YS2-2o06.p1k chr02 141 851 350917 350916 F 711 0.00 1293 reject_low 2 ALIGNMENT 58 YS2-2o06.p1k chr05 130 54 131073 131148 C 77 93.51 1293 reject_low 8 ALIGNMENT 71 YS2-2o06.p1k chr08 49 126 134314 134390 F 78 98.72 1293 reject_low 6 ALIGNMENT 73 YS2-2o06.p1k chr03 126 47 168291 168369 C 80 98.75 1293 reject_low 3 ALIGNMENT 853 YS2-2o07.p1k chr05 1149 36 120253 121374 C 1114 93.18 1186 accept 0 ALIGNMENT 323 YS2-2o07.q1k chr05 1 436 117107 117527 F 436 94.27 940 accept 0 ALIGNMENT 0 YS2-2o08.p1k vc_7 62 780 13562 13561 F 719 0.00 1309 reject_low 7 ALIGNMENT 37 YS2-2o08.q1k vc_4 716 755 5830 5869 F 40 97.50 1233 reject_low 9 ALIGNMENT 0 YS2-2o08.q1k vc_1 62 755 2530 2529 F 694 0.00 1233 reject_low 12 ALIGNMENT 47 YS2-2o08.q1k vc_4 756 885 6352 6478 F 130 82.31 1233 reject_low 9 ALIGNMENT 37 YS2-2o08.q1k vc_2 755 716 2107 2146 C 40 97.50 1233 reject_low 11 ALIGNMENT 26 YS2-2o08.p1k vc_1 811 781 2441 2472 C 31 96.77 1309 reject_low 17 ALIGNMENT 0 YS2-2o08.q1k vc_4 756 755 5870 6351 F 0 0.00 1233 reject_low 9 ALIGNMENT 284 YS2-2o08.p1k vc_7 781 1253 13562 14042 F 473 87.53 1309 reject_low 7 ALIGNMENT 0 YS2-2o08.p1k vc_5 780 62 5026 5025 C 719 0.00 1309 reject_low 5 ALIGNMENT 0 YS2-2o08.p1k vc_1 780 62 2106 2105 C 719 0.00 1309 reject_low 2 ALIGNMENT 255 YS2-2o08.p1k vc_4 781 1127 5871 6219 F 347 91.64 1309 reject_low 8 ALIGNMENT 703 YS2-2o08.p1k chr02 33 763 251393 252122 F 731 99.86 1309 accept_chi 0 ALIGNMENT 284 YS2-2o08.p1k vc_1 1253 781 1625 2105 C 473 87.74 1309 reject_low 2 ALIGNMENT 0 YS2-2o08.p1k vc_2 780 62 2106 2105 C 719 0.00 1309 reject_low 3 ALIGNMENT 26 YS2-2o08.p1k vc_3 811 781 2441 2472 C 31 96.77 1309 reject_low 18 ALIGNMENT 0 YS2-2o08.p1k vc_4 62 780 5871 5870 F 719 0.00 1309 reject_low 8 ALIGNMENT 0 YS2-2o08.q1k vc_4 62 715 5830 5829 F 654 0.00 1233 reject_low 9 ALIGNMENT 47 YS2-2o08.q1k vc_2 756 885 2163 2289 F 130 82.31 1233 reject_low 13 ALIGNMENT 47 YS2-2o08.q1k vc_4 885 756 5687 5813 C 130 82.31 1233 reject_low 15 ALIGNMENT 284 YS2-2o08.p1k vc_3 1253 781 1625 2105 C 473 87.74 1309 reject_low 4 ALIGNMENT 661 YS2-2o08.q1k chr02 716 3 251392 252104 C 714 98.74 1233 accept_chi 1 ALIGNMENT 0 YS2-2o08.p1k vc_3 780 62 2106 2105 C 719 0.00 1309 reject_low 4 ALIGNMENT 37 YS2-2o08.q1k vc_1 755 716 2474 2513 C 40 97.50 1233 reject_low 10 ALIGNMENT 0 YS2-2o08.p1k vc_7 62 780 100 99 F 719 0.00 1309 reject_low 6 ALIGNMENT 284 YS2-2o08.p1k vc_5 1253 781 4545 5025 C 473 87.74 1309 reject_low 5 ALIGNMENT 0 YS2-2o08.q1k vc_2 62 755 2163 2162 F 694 0.00 1233 reject_low 13 ALIGNMENT 0 YS2-2o08.p1k vc_1 848 812 2442 2441 C 37 0.00 1309 reject_low 17 ALIGNMENT 0 YS2-2o08.p1k vc_3 848 812 2442 2441 C 37 0.00 1309 reject_low 18 ALIGNMENT 284 YS2-2o08.p1k vc_2 1253 781 1625 2105 C 473 87.74 1309 reject_low 3 ALIGNMENT 47 YS2-2o08.q1k vc_1 756 885 2530 2656 F 130 82.31 1233 reject_low 12 ALIGNMENT 0 YS2-2o08.p1k vc_3 780 62 2473 2472 C 719 0.00 1309 reject_low 18 ALIGNMENT 0 YS2-2o08.q1k vc_1 715 62 2514 2513 C 654 0.00 1233 reject_low 10 ALIGNMENT 40 YS2-2o08.q1k vc_4 848 756 1447 1535 C 93 84.95 1233 reject_low 16 ALIGNMENT 284 YS2-2o08.p1k vc_7 781 1253 100 580 F 473 87.53 1309 reject_low 6 ALIGNMENT 0 YS2-2o08.q1k vc_4 62 755 125 124 F 694 0.00 1233 reject_low 14 ALIGNMENT 47 YS2-2o08.q1k vc_4 756 885 125 251 F 130 82.31 1233 reject_low 14 ALIGNMENT 0 YS2-2o08.q1k vc_4 755 62 5814 5813 C 694 0.00 1233 reject_low 15 ALIGNMENT 0 YS2-2o08.q1k vc_4 755 62 1536 1535 C 694 0.00 1233 reject_low 16 ALIGNMENT 0 YS2-2o08.q1k vc_2 715 62 2147 2146 C 654 0.00 1233 reject_low 11 ALIGNMENT 0 YS2-2o08.p1k vc_1 780 62 2473 2472 C 719 0.00 1309 reject_low 17 ALIGNMENT 0 YS2-2o08.p1k chr02 764 848 252122 252121 F 85 0.00 1309 accept_chi 0 ALIGNMENT 30 YS2-2o09.q1k vc_5 422 387 1 36 C 36 94.44 1438 reject_low 9 ALIGNMENT 303 YS2-2o09.p1k vc_2 447 1 1304 1749 C 447 90.38 530 reject_vc 2 ALIGNMENT 303 YS2-2o09.p1k vc_1 447 1 1304 1749 C 447 90.38 530 reject_vc 1 ALIGNMENT 302 YS2-2o09.q1k chr16 46 384 900808 901146 F 339 96.76 1438 accept 0 ALIGNMENT 297 YS2-2o09.p1k vc_7 1 447 13918 14363 F 447 89.93 530 reject_vc 7 ALIGNMENT 29 YS2-2o09.q1k vc_7 388 422 13525 13559 F 35 94.29 1438 reject_low 11 ALIGNMENT 0 YS2-2o09.q1k vc_4 101 383 5830 5829 F 283 0.00 1438 reject_low 8 ALIGNMENT 0 YS2-2o09.q1k vc_5 386 101 37 36 C 286 0.00 1438 reject_low 9 ALIGNMENT 0 YS2-2o09.q1k vc_7 101 387 13525 13524 F 287 0.00 1438 reject_low 11 ALIGNMENT 33 YS2-2o09.q1k vc_4 384 422 5830 5868 F 39 94.87 1438 reject_low 8 ALIGNMENT 30 YS2-2o09.q1k vc_5 422 387 5028 5063 C 36 94.44 1438 reject_low 10 ALIGNMENT 303 YS2-2o09.p1k vc_6 1 447 3712 4157 F 447 90.38 530 reject_vc 5 ALIGNMENT 0 YS2-2o09.q1k vc_5 386 101 5064 5063 C 286 0.00 1438 reject_low 10 ALIGNMENT 303 YS2-2o09.p1k vc_5 447 1 4224 4669 C 447 90.38 530 reject_vc 4 ALIGNMENT 303 YS2-2o09.p1k vc_3 447 1 1304 1749 C 447 90.38 530 reject_vc 3 ALIGNMENT 297 YS2-2o09.p1k vc_7 1 447 456 901 F 447 89.93 530 reject_vc 6 ALIGNMENT 69 YS2-2o10.q1k chr04 75 1 946299 946373 C 75 97.33 1336 reject_low 2 ALIGNMENT 65 YS2-2o10.q1k chr15 68 1 288192 288259 C 68 98.53 1336 reject_low 7 ALIGNMENT 0 YS2-2o10.q1k chr10 70 376 542959 542958 F 307 0.00 1336 reject_low 6 ALIGNMENT 0 YS2-2o10.q1k chr15 376 69 288193 288192 C 308 0.00 1336 reject_low 7 ALIGNMENT 498 YS2-2o10.q1k chr06 736 1 166780 167497 C 736 92.26 1336 accept 0 ALIGNMENT 0 YS2-2o10.q1k chr13 376 71 837926 837925 C 306 0.00 1336 reject_low 3 ALIGNMENT 70 YS2-2o10.q1k chr13 70 1 837925 837994 C 70 100.00 1336 reject_low 3 ALIGNMENT 0 YS2-2o10.q1k chr04 376 76 946300 946299 C 301 0.00 1336 reject_low 2 ALIGNMENT 0 YS2-2o10.q1k chr06 81 376 210707 210706 F 296 0.00 1336 reject_low 1 ALIGNMENT 66 YS2-2o10.q1k chr10 1 69 542891 542959 F 69 98.55 1336 reject_low 6 ALIGNMENT 69 YS2-2o10.q1k chr13 69 1 168794 168862 C 69 100.00 1336 reject_low 5 ALIGNMENT 69 YS2-2o10.q1k chr10 69 1 354159 354227 C 69 100.00 1336 reject_low 4 ALIGNMENT 0 YS2-2o10.q1k chr10 376 70 354160 354159 C 307 0.00 1336 reject_low 4 ALIGNMENT 0 YS2-2o10.q1k chr13 376 70 168795 168794 C 307 0.00 1336 reject_low 5 ALIGNMENT 80 YS2-2o10.q1k chr06 1 80 210628 210707 F 80 100.00 1336 reject_low 1 ALIGNMENT 911 YS2-2o10.p1k chr06 30 1097 162647 163714 F 1068 95.97 1216 accept 0 ALIGNMENT 1019 YS2-2o12.p1k chr04 1227 30 298372 299579 C 1198 96.24 1245 accept 0 ALIGNMENT 714 YS2-2o12.q1k chr04 25 849 294990 295805 F 825 96.73 1306 accept 0 ALIGNMENT 941 YS2-2o13.p1k chr16 36 1153 437394 438517 F 1118 96.96 1305 ambiguous_trans 1 ALIGNMENT 361 YS2-2o13.q1k chr16 451 28 440554 440974 C 424 96.93 1575 ambiguous_trans 1 ALIGNMENT 952 YS2-2o13.p1k chr10 1153 37 202059 203180 C 1117 97.22 1305 ambiguous_trans 0 ALIGNMENT 361 YS2-2o13.q1k chr08 28 451 87671 88091 F 424 96.93 1575 ambiguous_trans 2 ALIGNMENT 373 YS2-2o13.q1k chr10 28 451 199603 200023 F 424 97.88 1575 ambiguous_trans 0 ALIGNMENT 940 YS2-2o13.p1k chr08 1153 37 90127 91248 C 1117 96.87 1305 ambiguous_trans 2 ALIGNMENT 968 YS2-2o14.p1k chr04 27 1134 63880 65000 F 1108 96.93 1277 accept 0 ALIGNMENT 676 YS2-2o14.q1k chr04 890 7 68386 69255 C 884 93.78 1247 accept 0 ALIGNMENT 0 YS2-2o15.p1k chr13 299 439 184817 184816 F 141 0.00 439 reject_low 14 ALIGNMENT 320 YS2-2o15.q1k chr04 22 409 518871 519256 F 388 95.36 1520 ambiguous_trans 10 ALIGNMENT 0 YS2-2o15.q1k chr05 62 146 448664 448663 F 85 0.00 1520 reject_low 26 ALIGNMENT 0 YS2-2o15.p1k chr12 439 423 980926 980925 C 17 0.00 439 ambiguous_trans 2 ALIGNMENT 101 YS2-2o15.p1k chr16 298 31 855897 856164 C 268 79.85 439 reject_low 23 ALIGNMENT 85 YS2-2o15.q1k chr16 147 362 855897 856112 F 216 80.56 1520 reject_low 29 ALIGNMENT 104 YS2-2o15.p1k chr05 298 31 448664 448931 C 268 80.22 439 reject_low 21 ALIGNMENT 87 YS2-2o15.q1k chr16 364 147 844844 845061 C 218 80.73 1520 reject_low 15 ALIGNMENT 0 YS2-2o15.p1k chr16 439 299 809910 809909 C 141 0.00 439 reject_low 24 ALIGNMENT 327 YS2-2o15.q1k chr06 409 22 138295 138680 C 388 95.88 1520 ambiguous_trans 7 ALIGNMENT 63 YS2-2o15.q1k chr16 147 364 809909 810126 F 218 77.52 1520 reject_low 30 ALIGNMENT 0 YS2-2o15.p1k chr04 423 439 872587 872586 F 17 0.00 439 ambiguous_trans 4 ALIGNMENT 375 YS2-2o15.p1k chr04 31 422 872196 872587 F 392 99.23 439 ambiguous_trans 4 ALIGNMENT 342 YS2-2o15.q1k chr15 409 22 970669 971054 C 388 97.16 1520 ambiguous_trans 1 ALIGNMENT 0 YS2-2o15.p1k chr15 439 423 709253 709252 C 17 0.00 439 ambiguous_trans 3 ALIGNMENT 87 YS2-2o15.q1k chr07 147 364 567115 567332 F 218 80.73 1520 reject_low 27 ALIGNMENT 0 YS2-2o15.p1k chr04 439 423 518873 518872 C 17 0.00 439 ambiguous_trans 10 ALIGNMENT 320 YS2-2o15.q1k chr07 22 409 573932 574317 F 388 95.36 1520 ambiguous_trans 11 ALIGNMENT 80 YS2-2o15.p1k chr16 298 31 809909 810176 C 268 77.61 439 reject_low 24 ALIGNMENT 317 YS2-2o15.q1k chr14 22 409 567220 567605 F 388 95.10 1520 ambiguous_trans 12 ALIGNMENT 0 YS2-2o15.p1k chr15 423 439 971053 971052 F 17 0.00 439 ambiguous_trans 1 ALIGNMENT 0 YS2-2o15.q1k chr13 146 62 196985 196984 C 85 0.00 1520 reject_low 16 ALIGNMENT 87 YS2-2o15.q1k chr16 364 147 56887 57104 C 218 80.73 1520 reject_low 28 ALIGNMENT 110 YS2-2o15.p1k chr12 298 31 220353 220620 C 268 80.97 439 reject_low 19 ALIGNMENT 341 YS2-2o15.q1k chr12 22 409 980924 981309 F 388 97.16 1520 ambiguous_trans 2 ALIGNMENT 0 YS2-2o15.q1k chr07 62 146 567115 567114 F 85 0.00 1520 reject_low 27 ALIGNMENT 0 YS2-2o15.p1k chr15 299 439 595468 595467 F 141 0.00 439 reject_low 20 ALIGNMENT 0 YS2-2o15.q1k chr04 62 146 650765 650764 F 85 0.00 1520 reject_low 25 ALIGNMENT 110 YS2-2o15.p1k chr02 31 298 259956 260223 F 268 80.97 439 reject_low 13 ALIGNMENT 110 YS2-2o15.p1k chr15 31 298 595201 595468 F 268 80.97 439 reject_low 20 ALIGNMENT 0 YS2-2o15.p1k chr14 439 423 567222 567221 C 17 0.00 439 ambiguous_trans 12 ALIGNMENT 0 YS2-2o15.p1k chr02 423 439 30412 30411 F 17 0.00 439 ambiguous_trans 0 ALIGNMENT 87 YS2-2o15.q1k chr02 364 147 260006 260223 C 218 80.73 1520 reject_low 13 ALIGNMENT 339 YS2-2o15.q1k chr04 409 22 981552 981937 C 388 96.91 1520 ambiguous_trans 5 ALIGNMENT 363 YS2-2o15.p1k chr07 31 422 811832 812223 F 392 98.21 439 ambiguous_trans 8 ALIGNMENT 0 YS2-2o15.q1k chr02 146 62 260224 260223 C 85 0.00 1520 reject_low 13 ALIGNMENT 363 YS2-2o15.p1k chr06 31 422 138288 138679 F 392 98.21 439 ambiguous_trans 7 ALIGNMENT 0 YS2-2o15.p1k chr04 439 299 650766 650765 C 141 0.00 439 reject_low 17 ALIGNMENT 0 YS2-2o15.p1k chr07 423 439 812223 812222 F 17 0.00 439 ambiguous_trans 8 ALIGNMENT 87 YS2-2o15.q1k chr13 364 147 196767 196984 C 218 80.73 1520 reject_low 16 ALIGNMENT 0 YS2-2o15.p1k chr10 299 439 473030 473029 F 141 0.00 439 reject_low 22 ALIGNMENT 339 YS2-2o15.q1k chr04 409 22 872203 872588 C 388 96.91 1520 ambiguous_trans 4 ALIGNMENT 0 YS2-2o15.p1k chr03 423 439 85581 85580 F 17 0.00 439 ambiguous_trans 6 ALIGNMENT 104 YS2-2o15.p1k chr13 31 298 196717 196984 F 268 80.22 439 reject_low 16 ALIGNMENT 87 YS2-2o15.q1k chr04 147 364 650765 650982 F 218 80.73 1520 reject_low 25 ALIGNMENT 354 YS2-2o15.p1k chr14 422 31 567221 567612 C 392 97.45 439 ambiguous_trans 12 ALIGNMENT 327 YS2-2o15.q1k chr07 409 22 811839 812224 C 388 95.88 1520 ambiguous_trans 8 ALIGNMENT 110 YS2-2o15.p1k chr16 31 298 844794 845061 F 268 80.97 439 reject_low 15 ALIGNMENT 0 YS2-2o15.p1k chr13 299 439 196984 196983 F 141 0.00 439 reject_low 16 ALIGNMENT 0 YS2-2o15.p1k chr07 439 423 573934 573933 C 17 0.00 439 ambiguous_trans 11 ALIGNMENT 357 YS2-2o15.p1k chr12 31 422 941569 941960 F 392 97.70 439 ambiguous_trans 9 ALIGNMENT 0 YS2-2o15.q1k chr16 62 146 855897 855896 F 85 0.00 1520 reject_low 29 ALIGNMENT 341 YS2-2o15.q1k chr15 22 409 709251 709636 F 388 97.16 1520 ambiguous_trans 3 ALIGNMENT 87 YS2-2o15.q1k chr13 364 147 184600 184817 C 218 80.73 1520 reject_low 14 ALIGNMENT 327 YS2-2o15.q1k chr03 409 22 85197 85582 C 388 95.88 1520 ambiguous_trans 6 ALIGNMENT 110 YS2-2o15.p1k chr04 298 31 650765 651032 C 268 80.97 439 reject_low 17 ALIGNMENT 0 YS2-2o15.p1k chr05 439 299 448665 448664 C 141 0.00 439 reject_low 21 ALIGNMENT 378 YS2-2o15.p1k chr15 31 422 970662 971053 F 392 99.49 439 ambiguous_trans 1 ALIGNMENT 110 YS2-2o15.p1k chr13 31 298 184550 184817 F 268 80.97 439 reject_low 14 ALIGNMENT 87 YS2-2o15.q1k chr05 147 364 448664 448881 F 218 80.73 1520 reject_low 26 ALIGNMENT 0 YS2-2o15.p1k chr02 299 439 260223 260222 F 141 0.00 439 reject_low 13 ALIGNMENT 0 YS2-2o15.q1k chr16 62 146 809909 809908 F 85 0.00 1520 reject_low 30 ALIGNMENT 0 YS2-2o15.q1k chr13 146 62 184818 184817 C 85 0.00 1520 reject_low 14 ALIGNMENT 378 YS2-2o15.p1k chr15 422 31 709252 709643 C 392 99.49 439 ambiguous_trans 3 ALIGNMENT 0 YS2-2o15.p1k chr16 439 299 855898 855897 C 141 0.00 439 reject_low 23 ALIGNMENT 0 YS2-2o15.q1k chr16 146 62 57105 57104 C 85 0.00 1520 reject_low 28 ALIGNMENT 378 YS2-2o15.p1k chr02 31 422 30021 30412 F 392 99.49 439 ambiguous_trans 0 ALIGNMENT 0 YS2-2o15.p1k chr12 423 439 941960 941959 F 17 0.00 439 ambiguous_trans 9 ALIGNMENT 104 YS2-2o15.p1k chr10 31 298 472763 473030 F 268 80.22 439 reject_low 22 ALIGNMENT 321 YS2-2o15.q1k chr12 409 22 941576 941961 C 388 95.36 1520 ambiguous_trans 9 ALIGNMENT 378 YS2-2o15.p1k chr12 422 31 980925 981316 C 392 99.49 439 ambiguous_trans 2 ALIGNMENT 0 YS2-2o15.p1k chr06 423 439 138679 138678 F 17 0.00 439 ambiguous_trans 7 ALIGNMENT 363 YS2-2o15.p1k chr03 31 422 85190 85581 F 392 98.21 439 ambiguous_trans 6 ALIGNMENT 0 YS2-2o15.q1k chr16 146 62 845062 845061 C 85 0.00 1520 reject_low 15 ALIGNMENT 0 YS2-2o15.p1k chr05 439 299 497764 497763 C 141 0.00 439 reject_low 18 ALIGNMENT 357 YS2-2o15.p1k chr04 422 31 518872 519263 C 392 97.70 439 ambiguous_trans 10 ALIGNMENT 357 YS2-2o15.p1k chr07 422 31 573933 574324 C 392 97.70 439 ambiguous_trans 11 ALIGNMENT 342 YS2-2o15.q1k chr02 409 22 30028 30413 C 388 97.16 1520 ambiguous_trans 0 ALIGNMENT 0 YS2-2o15.p1k chr16 299 439 845061 845060 F 141 0.00 439 reject_low 15 ALIGNMENT 0 YS2-2o15.p1k chr12 439 299 220354 220353 C 141 0.00 439 reject_low 19 ALIGNMENT 0 YS2-2o15.p1k chr04 423 439 981936 981935 F 17 0.00 439 ambiguous_trans 5 ALIGNMENT 375 YS2-2o15.p1k chr04 31 422 981545 981936 F 392 99.23 439 ambiguous_trans 5 ALIGNMENT 110 YS2-2o15.p1k chr05 298 31 497763 498030 C 268 80.97 439 reject_low 18 ALIGNMENT 856 YS2-2o16.p1k chr03 30 982 21977 22938 F 953 97.80 1157 accept 0 ALIGNMENT 360 YS2-2o16.q1k chr03 496 4 27576 28062 C 493 93.71 1461 accept 0 ALIGNMENT 910 YS2-2o17.p1k chr13 1038 29 892855 893873 C 1010 98.02 1192 accept 0 ALIGNMENT 802 YS2-2o17.q1k chr13 25 922 887667 888560 F 898 97.22 1198 accept 0 ALIGNMENT 399 YS2-2o18.q1k chr04 564 1 592837 593390 C 564 92.55 1359 accept 0 ALIGNMENT 978 YS2-2o18.p1k chr04 29 1195 590528 591706 F 1167 95.46 1204 accept 0 ALIGNMENT 0 YS2-2o19.p1k chr13 878 726 357025 357024 C 153 0.00 1278 ambiguous_trans 14 ALIGNMENT 0 YS2-2o19.p1k chr02 746 878 265492 265491 F 133 0.00 1278 ambiguous_trans 12 ALIGNMENT 622 YS2-2o19.p1k chr10 29 745 483170 483886 F 717 97.49 1278 ambiguous_trans 10 ALIGNMENT 0 YS2-2o19.p1k chr14 878 726 96631 96630 C 153 0.00 1278 ambiguous_trans 13 ALIGNMENT 622 YS2-2o19.p1k chr07 29 745 540973 541689 F 717 97.49 1278 ambiguous_trans 9 ALIGNMENT 0 YS2-2o19.p1k chr13 746 878 190083 190082 F 133 0.00 1278 ambiguous_trans 6 ALIGNMENT 0 YS2-2o19.p1k chr16 746 878 850336 850335 F 133 0.00 1278 ambiguous_trans 4 ALIGNMENT 0 YS2-2o19.p1k chr01 878 726 160260 160259 C 153 0.00 1278 ambiguous_trans 19 ALIGNMENT 0 YS2-2o19.p1k chr05 878 546 492692 492691 C 333 0.00 1278 ambiguous_trans 17 ALIGNMENT 546 YS2-2o19.p1k chr15 29 725 122911 123607 F 697 94.69 1278 ambiguous_trans 16 ALIGNMENT 0 YS2-2o19.p1k chr07 746 878 541689 541688 F 133 0.00 1278 ambiguous_trans 9 ALIGNMENT 0 YS2-2o19.p1k chr13 878 747 372696 372695 C 132 0.00 1278 ambiguous_trans 2 ALIGNMENT 224 YS2-2o19.p1k chr01 725 408 165847 166163 C 318 92.45 1278 ambiguous_trans 23 ALIGNMENT 21 YS2-2o19.q1k chr09 766 714 430672 430722 C 53 83.02 1203 reject_bad_break 0 ALIGNMENT 676 YS2-2o19.p1k chr12 745 29 215081 215797 C 717 100.00 1278 ambiguous_trans_ua 3 ALIGNMENT 673 YS2-2o19.p1k chr04 29 745 1100971 1101687 F 717 99.86 1278 ambiguous_trans 5 ALIGNMENT 181 YS2-2o19.q1k chr09 616 46 430817 431384 C 571 78.46 1203 reject_bad_break 0 ALIGNMENT 657 YS2-2o19.p1k chr16 725 29 850645 851341 C 697 100.00 1278 ambiguous_trans 7 ALIGNMENT 0 YS2-2o19.p1k chr07 62 535 817206 817205 F 474 0.00 1278 ambiguous_trans 24 ALIGNMENT 0 YS2-2o19.p1k chr15 726 878 123607 123606 F 153 0.00 1278 ambiguous_trans 16 ALIGNMENT 584 YS2-2o19.p1k chr02 29 725 226245 226935 F 697 96.84 1278 ambiguous_trans 15 ALIGNMENT 0 YS2-2o19.p1k chr07 723 878 817387 817386 F 156 0.00 1278 ambiguous_trans 24 ALIGNMENT 590 YS2-2o19.p1k chr14 725 29 96630 97320 C 697 97.13 1278 ambiguous_trans 13 ALIGNMENT 0 YS2-2o19.p1k chr02 726 878 226935 226934 F 153 0.00 1278 ambiguous_trans 15 ALIGNMENT 587 YS2-2o19.p1k chr13 725 29 357024 357714 C 697 96.99 1278 ambiguous_trans 14 ALIGNMENT 454 YS2-2o19.p1k chr13 29 724 201540 202234 F 696 90.37 1278 ambiguous_trans 21 ALIGNMENT 0 YS2-2o19.q1k chr07 170 551 9306 9305 F 382 0.00 1203 reject_low 22 ALIGNMENT 0 YS2-2o19.p1k chr16 878 726 850646 850645 C 153 0.00 1278 ambiguous_trans 7 ALIGNMENT 0 YS2-2o19.p1k chr05 62 406 443365 443364 F 345 0.00 1278 ambiguous_trans_ua 25 ALIGNMENT 0 YS2-2o19.p1k chr05 878 731 443409 443408 C 148 0.00 1278 ambiguous_trans 18 ALIGNMENT 0 YS2-2o19.p1k chr13 725 878 202234 202233 F 154 0.00 1278 ambiguous_trans 21 ALIGNMENT 0 YS2-2o19.p1k chr12 878 746 215082 215081 C 133 0.00 1278 ambiguous_trans_ua 3 ALIGNMENT 41 YS2-2o19.q1k chr07 46 169 9180 9306 F 124 78.23 1203 reject_low 22 ALIGNMENT 676 YS2-2o19.p1k chr16 29 745 849620 850336 F 717 100.00 1278 ambiguous_trans 4 ALIGNMENT 0 YS2-2o19.p1k chr04 746 878 1101687 1101686 F 133 0.00 1278 ambiguous_trans 5 ALIGNMENT 606 YS2-2o19.p1k chr02 29 745 264782 265492 F 717 97.07 1278 ambiguous_trans 12 ALIGNMENT 0 YS2-2o19.p1k chr10 746 878 483886 483885 F 133 0.00 1278 ambiguous_trans 10 ALIGNMENT 0 YS2-2o19.p1k chr15 748 878 600736 600735 F 131 0.00 1278 ambiguous_trans 8 ALIGNMENT 21 YS2-2o19.p1k chr05 407 434 443365 443392 F 28 92.86 1278 ambiguous_trans_ua 25 ALIGNMENT 0 YS2-2o19.q1k chr09 713 617 430723 430816 C 97 0.00 1203 reject_bad_break 0 ALIGNMENT 0 YS2-2o19.p1k chr01 878 726 165848 165847 C 153 0.00 1278 ambiguous_trans 23 ALIGNMENT 466 YS2-2o19.p1k chr12 725 29 475995 476690 C 697 90.96 1278 ambiguous_trans 20 ALIGNMENT 0 YS2-2o19.p1k chr01 407 62 166164 166163 C 346 0.00 1278 ambiguous_trans 23 ALIGNMENT 0 YS2-2o19.p1k chr12 878 726 475996 475995 C 153 0.00 1278 ambiguous_trans 20 ALIGNMENT 490 YS2-2o19.p1k chr05 545 29 492691 493207 C 517 100.00 1278 ambiguous_trans 17 ALIGNMENT 677 YS2-2o19.p1k chr13 746 29 372695 373412 C 718 100.00 1278 ambiguous_trans 2 ALIGNMENT 609 YS2-2o19.p1k chr07 745 29 817398 818108 C 717 97.21 1278 ambiguous_trans_ua 11 ALIGNMENT 647 YS2-2o19.p1k chr08 755 29 543600 544320 C 727 98.62 1278 ambiguous_trans 1 ALIGNMENT 0 YS2-2o19.p1k chr08 878 756 543601 543600 C 123 0.00 1278 ambiguous_trans 1 ALIGNMENT 84 YS2-2o19.p1k chr07 536 722 817206 817387 F 187 85.56 1278 ambiguous_trans 24 ALIGNMENT 0 YS2-2o19.p1k chr07 878 746 817399 817398 C 133 0.00 1278 ambiguous_trans_ua 11 ALIGNMENT 470 YS2-2o19.p1k chr05 730 29 443408 444108 C 702 91.03 1278 ambiguous_trans 18 ALIGNMENT 0 YS2-2o19.p1k chr05 435 878 443392 443391 F 444 0.00 1278 ambiguous_trans_ua 25 ALIGNMENT 466 YS2-2o19.p1k chr01 725 29 160259 160954 C 697 90.96 1278 ambiguous_trans 19 ALIGNMENT 642 YS2-2o19.p1k chr13 29 745 189373 190083 F 717 98.74 1278 ambiguous_trans 6 ALIGNMENT 611 YS2-2o19.p1k chr15 29 747 600024 600736 F 719 97.22 1278 ambiguous_trans 8 ALIGNMENT 0 YS2-2o20.p1k chr01 828 725 160260 160259 C 104 0.00 1272 ambiguous_trans 19 ALIGNMENT 0 YS2-2o20.p1k chr08 828 755 543601 543600 C 74 0.00 1272 ambiguous_trans 1 ALIGNMENT 224 YS2-2o20.p1k chr01 724 407 165847 166163 C 318 92.45 1272 ambiguous_trans 23 ALIGNMENT 187 YS2-2o20.q1k chr09 731 11 430672 431384 C 721 76.70 1313 accept 0 ALIGNMENT 617 YS2-2o20.p1k chr10 32 744 483174 483886 F 713 97.48 1272 ambiguous_trans 10 ALIGNMENT 0 YS2-2o20.p1k chr07 828 745 817399 817398 C 84 0.00 1272 ambiguous_trans_ua 11 ALIGNMENT 586 YS2-2o20.p1k chr14 724 32 96630 97316 C 693 97.11 1272 ambiguous_trans 13 ALIGNMENT 0 YS2-2o20.p1k chr12 828 745 215082 215081 C 84 0.00 1272 ambiguous_trans_ua 3 ALIGNMENT 140 YS2-2o20.p1k chr06 410 678 137658 137907 F 269 89.22 1272|0,2 ambiguous_trans 28 ALIGNMENT 0 YS2-2o20.p1k chr06 730 828 158669 158668 F 99 0.00 1272 ambiguous_trans_ua 25 ALIGNMENT 84 YS2-2o20.p1k chr07 535 721 817206 817387 F 187 85.56 1272 ambiguous_trans 26 ALIGNMENT 0 YS2-2o20.p1k chr07 62 534 817206 817205 F 473 0.00 1272 ambiguous_trans 26 ALIGNMENT 604 YS2-2o20.p1k chr07 744 32 817398 818104 C 713 97.19 1272 ambiguous_trans_ua 11 ALIGNMENT 0 YS2-2o20.p1k chr13 828 746 372696 372695 C 83 0.00 1272 ambiguous_trans 2 ALIGNMENT 617 YS2-2o20.p1k chr07 32 744 540977 541689 F 713 97.48 1272 ambiguous_trans 9 ALIGNMENT 0 YS2-2o20.p1k chr01 406 62 166164 166163 C 345 0.00 1272 ambiguous_trans 23 ALIGNMENT 0 YS2-2o20.p1k chr13 745 828 190083 190082 F 84 0.00 1272 ambiguous_trans 6 ALIGNMENT 0 YS2-2o20.p1k chr13 828 725 357025 357024 C 104 0.00 1272 ambiguous_trans 14 ALIGNMENT 671 YS2-2o20.p1k chr16 32 744 849624 850336 F 713 100.00 1272 ambiguous_trans 4 ALIGNMENT 0 YS2-2o20.p1k chr15 725 828 123607 123606 F 104 0.00 1272 ambiguous_trans 16 ALIGNMENT 0 YS2-2o20.p1k chr06 722 828 143843 143842 F 107 0.00 1272 ambiguous_trans 22 ALIGNMENT 462 YS2-2o20.p1k chr01 724 32 160259 160950 C 693 90.91 1272 ambiguous_trans 19 ALIGNMENT 542 YS2-2o20.p1k chr15 32 724 122915 123607 F 693 94.66 1272 ambiguous_trans 16 ALIGNMENT 0 YS2-2o20.p1k chr12 828 725 475996 475995 C 104 0.00 1272 ambiguous_trans 20 ALIGNMENT 0 YS2-2o20.p1k chr05 828 545 492692 492691 C 284 0.00 1272 ambiguous_trans 17 ALIGNMENT 0 YS2-2o20.p1k chr07 722 828 817387 817386 F 107 0.00 1272 ambiguous_trans 26 ALIGNMENT 653 YS2-2o20.p1k chr16 724 32 850645 851337 C 693 100.00 1272 ambiguous_trans 7 ALIGNMENT 0 YS2-2o20.p1k chr07 745 828 541689 541688 F 84 0.00 1272 ambiguous_trans 9 ALIGNMENT 0 YS2-2o20.p1k chr06 62 458 158408 158407 F 397 0.00 1272 ambiguous_trans_ua 25 ALIGNMENT 0 YS2-2o20.p1k chr16 828 725 850646 850645 C 104 0.00 1272 ambiguous_trans 7 ALIGNMENT 671 YS2-2o20.p1k chr12 744 32 215081 215793 C 713 100.00 1272 ambiguous_trans_ua 3 ALIGNMENT 0 YS2-2o20.p1k chr01 828 725 165848 165847 C 104 0.00 1272 ambiguous_trans 23 ALIGNMENT 21 YS2-2o20.p1k chr05 406 433 443365 443392 F 28 92.86 1272 ambiguous_trans_ua 27 ALIGNMENT 466 YS2-2o20.p1k chr05 729 32 443408 444104 C 698 90.97 1272 ambiguous_trans 18 ALIGNMENT 0 YS2-2o20.p1k chr15 747 828 600736 600735 F 82 0.00 1272 ambiguous_trans 8 ALIGNMENT 462 YS2-2o20.p1k chr12 724 32 475995 476686 C 693 90.91 1272 ambiguous_trans 20 ALIGNMENT 643 YS2-2o20.p1k chr08 754 32 543600 544316 C 723 98.62 1272 ambiguous_trans 1 ALIGNMENT 111 YS2-2o20.p1k chr06 459 729 158408 158669 F 271 84.13 1272 ambiguous_trans_ua 25 ALIGNMENT 0 YS2-2o20.p1k chr05 434 828 443392 443391 F 395 0.00 1272 ambiguous_trans_ua 27 ALIGNMENT 673 YS2-2o20.p1k chr13 745 32 372695 373408 C 714 100.00 1272 ambiguous_trans 2 ALIGNMENT 38 YS2-2o20.p1k chr06 674 724 143867 143917 F 51 94.12 1272|3,0 ambiguous_trans 28 ALIGNMENT 0 YS2-2o20.p1k chr10 745 828 483886 483885 F 84 0.00 1272 ambiguous_trans 10 ALIGNMENT 0 YS2-2o20.p1k chr02 725 828 226935 226934 F 104 0.00 1272 ambiguous_trans 15 ALIGNMENT 38 YS2-2o20.q1k chr07 11 119 9180 9291 F 109 78.90 1313 reject_low 21 ALIGNMENT 351 YS2-2o20.p1k chr06 34 721 143162 143843 F 688 86.19 1272 ambiguous_trans 22 ALIGNMENT 0 YS2-2o20.p1k chr05 62 405 443365 443364 F 344 0.00 1272 ambiguous_trans_ua 27 ALIGNMENT 668 YS2-2o20.p1k chr04 32 744 1100975 1101687 F 713 99.86 1272 ambiguous_trans 5 ALIGNMENT 0 YS2-2o20.q1k chr07 120 529 9291 9290 F 410 0.00 1313 reject_low 21 ALIGNMENT 580 YS2-2o20.p1k chr02 32 724 226249 226935 F 693 96.83 1272 ambiguous_trans 15 ALIGNMENT 0 YS2-2o20.p1k chr06 62 404 137906 137905 F 343 0.00 1272 ambiguous_trans 24 ALIGNMENT 607 YS2-2o20.p1k chr15 32 746 600028 600736 F 715 97.20 1272 ambiguous_trans 8 ALIGNMENT 0 YS2-2o20.p1k chr06 677 676 137906 143869 F 0 0.00 1272 ambiguous_trans 28 ALIGNMENT 135 YS2-2o20.p1k chr06 405 721 137906 138216 F 317 84.23 1272 ambiguous_trans 24 ALIGNMENT 0 YS2-2o20.p1k chr14 828 725 96631 96630 C 104 0.00 1272 ambiguous_trans 13 ALIGNMENT 485 YS2-2o20.p1k chr05 544 32 492691 493203 C 513 100.00 1272 ambiguous_trans 17 ALIGNMENT 583 YS2-2o20.p1k chr13 724 32 357024 357710 C 693 96.97 1272 ambiguous_trans 14 ALIGNMENT 0 YS2-2o20.p1k chr04 745 828 1101687 1101686 F 84 0.00 1272 ambiguous_trans 5 ALIGNMENT 637 YS2-2o20.p1k chr13 32 744 189377 190083 F 713 98.74 1272 ambiguous_trans 6 ALIGNMENT 0 YS2-2o20.p1k chr16 745 828 850336 850335 F 84 0.00 1272 ambiguous_trans 4 ALIGNMENT 0 YS2-2o20.p1k chr02 745 828 265492 265491 F 84 0.00 1272 ambiguous_trans 12 ALIGNMENT 0 YS2-2o20.p1k chr06 62 409 137658 137657 F 348 0.00 1272 ambiguous_trans 28 ALIGNMENT 0 YS2-2o20.p1k chr06 725 828 143917 143916 F 104 0.00 1272 ambiguous_trans 28 ALIGNMENT 0 YS2-2o20.p1k chr06 722 828 138216 138215 F 107 0.00 1272 ambiguous_trans 24 ALIGNMENT 601 YS2-2o20.p1k chr02 32 744 264786 265492 F 713 97.05 1272 ambiguous_trans 12 ALIGNMENT 0 YS2-2o20.p1k chr05 828 730 443409 443408 C 99 0.00 1272 ambiguous_trans 18 ALIGNMENT 0 YS2-2o22.q1k vc_5 475 383 2 1 C 93 0.00 1141 reject_low 16 ALIGNMENT 0 YS2-2o22.q1k vc_2 346 62 2144 2143 C 285 0.00 1141 reject_low 12 ALIGNMENT 142 YS2-2o22.q1k vc_4 385 546 6353 6514 F 162 96.30 1141|1,0 reject_low 9 ALIGNMENT 0 YS2-2o22.q1k vc_3 346 62 2511 2510 C 285 0.00 1141 reject_low 13 ALIGNMENT 0 YS2-2o22.q1k vc_1 62 384 2531 2530 F 323 0.00 1141 reject_low 4 ALIGNMENT 0 YS2-2o22.q1k vc_7 62 347 13525 13524 F 286 0.00 1141 reject_low 15 ALIGNMENT 239 YS2-2o22.q1k vc_4 828 385 5383 5812 C 444 87.84 1141 reject_low 2 ALIGNMENT 0 YS2-2o22.q1k vc_4 62 384 126 125 F 323 0.00 1141 reject_low 8 ALIGNMENT 240 YS2-2o22.q1k vc_7 786 385 2338 2727 C 402 89.30 1141 reject_low 3 ALIGNMENT 39 YS2-2o22.q1k vc_2 385 347 2105 2143 C 39 100.00 1141 reject_low 12 ALIGNMENT 0 YS2-2o22.q1k vc_3 62 384 2531 2530 F 323 0.00 1141 reject_low 6 ALIGNMENT 0 YS2-2o22.q1k vc_1 346 62 2511 2510 C 285 0.00 1141 reject_low 11 ALIGNMENT 38 YS2-2o22.q1k vc_7 348 385 13525 13562 F 38 100.00 1141 reject_low 15 ALIGNMENT 39 YS2-2o22.q1k vc_3 385 347 2472 2510 C 39 100.00 1141 reject_low 13 ALIGNMENT 0 YS2-2o22.q1k vc_5 346 62 5064 5063 C 285 0.00 1141 reject_low 14 ALIGNMENT 142 YS2-2o22.q1k vc_4 385 546 126 287 F 162 96.30 1141 reject_low 8 ALIGNMENT 320 YS2-2o22.q1k chr02 346 1 573298 573643 C 346 98.84 1141 accept_chi 1 ALIGNMENT 0 YS2-2o22.q1k vc_7 386 475 13562 13561 F 90 0.00 1141 reject_low 15 ALIGNMENT 0 YS2-2o22.q1k vc_2 475 386 2106 2105 C 90 0.00 1141 reject_low 12 ALIGNMENT 0 YS2-2o22.q1k vc_3 475 386 2473 2472 C 90 0.00 1141 reject_low 13 ALIGNMENT 361 YS2-2o22.p1k chr02 35 426 573298 573689 F 392 98.72 444 accept_chi 0 ALIGNMENT 0 YS2-2o22.q1k vc_4 384 62 1535 1534 C 323 0.00 1141 reject_low 10 ALIGNMENT 0 YS2-2o22.q1k chr02 475 347 573299 573298 C 129 0.00 1141 accept_chi 1 ALIGNMENT 0 YS2-2o22.q1k vc_5 346 62 37 36 C 285 0.00 1141 reject_low 16 ALIGNMENT 39 YS2-2o22.q1k vc_4 347 385 5833 5871 F 39 100.00 1141 reject_low 9 ALIGNMENT 0 YS2-2o22.q1k vc_1 475 386 2473 2472 C 90 0.00 1141 reject_low 11 ALIGNMENT 0 YS2-2o22.q1k vc_2 62 384 2164 2163 F 323 0.00 1141 reject_low 5 ALIGNMENT 0 YS2-2o22.q1k vc_5 475 386 5026 5025 C 90 0.00 1141 reject_low 14 ALIGNMENT 239 YS2-2o22.q1k vc_3 385 786 2531 2920 F 402 89.30 1141 reject_low 6 ALIGNMENT 0 YS2-2o22.q1k vc_4 386 385 5872 6353 F 0 0.00 1141 reject_low 9 ALIGNMENT 0 YS2-2o22.q1k vc_4 62 346 5833 5832 F 285 0.00 1141 reject_low 9 ALIGNMENT 39 YS2-2o22.q1k vc_5 385 347 5025 5063 C 39 100.00 1141 reject_low 14 ALIGNMENT 239 YS2-2o22.q1k vc_5 385 786 2398 2787 F 402 89.30 1141 reject_low 7 ALIGNMENT 0 YS2-2o22.q1k vc_5 62 384 2398 2397 F 323 0.00 1141 reject_low 7 ALIGNMENT 83 YS2-2o22.q1k vc_4 471 385 1448 1534 C 87 98.85 1141 reject_low 10 ALIGNMENT 39 YS2-2o22.q1k vc_1 385 347 2472 2510 C 39 100.00 1141 reject_low 11 ALIGNMENT 239 YS2-2o22.q1k vc_2 385 786 2164 2553 F 402 89.30 1141 reject_low 5 ALIGNMENT 36 YS2-2o22.q1k vc_5 382 347 1 36 C 36 100.00 1141 reject_low 16 ALIGNMENT 0 YS2-2o22.p1k chr02 427 444 573689 573688 F 18 0.00 444 accept_chi 0 ALIGNMENT 0 YS2-2o22.q1k vc_4 384 62 5813 5812 C 323 0.00 1141 reject_low 2 ALIGNMENT 0 YS2-2o22.q1k vc_7 384 62 2728 2727 C 323 0.00 1141 reject_low 3 ALIGNMENT 239 YS2-2o22.q1k vc_1 385 786 2531 2920 F 402 89.30 1141 reject_low 4 ALIGNMENT 915 YS2-2o23.p1k chr14 33 1112 77012 78091 F 1080 95.56 1189 accept 0 ALIGNMENT 632 YS2-2o23.q1k chr14 862 28 80773 81594 C 835 93.65 1215 accept 0 ALIGNMENT 0 YS2-2o24.q1k vc_5 614 396 5065 5064 C 219 0.00 1204 reject_low 10 ALIGNMENT 98 YS2-2o24.q1k vc_7 835 654 2546 2727 C 182 85.71 1204 reject_low 6 ALIGNMENT 98 YS2-2o24.q1k vc_4 835 654 5631 5812 C 182 85.71 1204 reject_low 4 ALIGNMENT 0 YS2-2o24.q1k vc_4 653 653 5870 6352 F 1 0.00 1204 reject_low 8 ALIGNMENT 523 YS2-2o24.p1k chr14 32 609 393661 394240 F 578 97.92 627 accept_chi 0 ALIGNMENT 90 YS2-2o24.q1k vc_4 654 809 126 282 F 156 86.54 1204 reject_low 7 ALIGNMENT 34 YS2-2o24.q1k vc_3 652 616 2474 2510 C 37 97.30 1204 reject_low 12 ALIGNMENT 33 YS2-2o24.q1k vc_7 617 652 13525 13560 F 36 97.22 1204 reject_low 14 ALIGNMENT 0 YS2-2o24.q1k vc_4 653 396 1535 1534 C 258 0.00 1204 reject_low 9 ALIGNMENT 0 YS2-2o24.q1k vc_3 396 653 2531 2530 F 258 0.00 1204 reject_low 3 ALIGNMENT 34 YS2-2o24.q1k vc_1 652 616 2474 2510 C 37 97.30 1204 reject_low 11 ALIGNMENT 0 YS2-2o24.p1k chr14 610 627 394240 394239 F 18 0.00 627 accept_chi 0 ALIGNMENT 439 YS2-2o24.q1k chr14 618 33 393656 394240 C 586 92.32 1204 accept_chi 1 ALIGNMENT 34 YS2-2o24.q1k vc_4 616 652 5833 5869 F 37 97.30 1204 reject_low 8 ALIGNMENT 90 YS2-2o24.q1k vc_4 654 809 6353 6509 F 156 86.54 1204 reject_low 8 ALIGNMENT 0 YS2-2o24.q1k vc_7 653 396 2728 2727 C 258 0.00 1204 reject_low 6 ALIGNMENT 34 YS2-2o24.q1k vc_5 651 615 1 37 C 37 97.30 1204 reject_low 13 ALIGNMENT 0 YS2-2o24.q1k vc_5 614 396 38 37 C 219 0.00 1204 reject_low 13 ALIGNMENT 98 YS2-2o24.q1k vc_5 654 835 2398 2579 F 182 85.71 1204 reject_low 5 ALIGNMENT 0 YS2-2o24.q1k vc_7 396 616 13525 13524 F 221 0.00 1204 reject_low 14 ALIGNMENT 0 YS2-2o24.q1k vc_1 615 396 2511 2510 C 220 0.00 1204 reject_low 11 ALIGNMENT 0 YS2-2o24.q1k vc_3 615 396 2511 2510 C 220 0.00 1204 reject_low 12 ALIGNMENT 0 YS2-2o24.q1k vc_4 653 396 5813 5812 C 258 0.00 1204 reject_low 4 ALIGNMENT 98 YS2-2o24.q1k vc_1 654 835 2531 2712 F 182 85.71 1204 reject_low 2 ALIGNMENT 0 YS2-2o24.q1k vc_4 396 653 126 125 F 258 0.00 1204 reject_low 7 ALIGNMENT 0 YS2-2o24.q1k vc_4 396 615 5833 5832 F 220 0.00 1204 reject_low 8 ALIGNMENT 0 YS2-2o24.q1k vc_5 396 653 2398 2397 F 258 0.00 1204 reject_low 5 ALIGNMENT 61 YS2-2o24.q1k vc_4 740 654 1448 1534 C 87 90.80 1204 reject_low 9 ALIGNMENT 98 YS2-2o24.q1k vc_3 654 835 2531 2712 F 182 85.71 1204 reject_low 3 ALIGNMENT 35 YS2-2o24.q1k vc_5 652 615 5027 5064 C 38 97.37 1204 reject_low 10 ALIGNMENT 0 YS2-2o24.q1k vc_1 396 653 2531 2530 F 258 0.00 1204 reject_low 2 ALIGNMENT 672 YS2-2p01.p1k chr10 75 862 68439 69217 F 788 96.32 1344 accept 0 ALIGNMENT 1071 YS2-2p02.p1k chr07 31 1228 810190 811395 F 1198 96.99 1232 accept 0 ALIGNMENT 78 YS2-2p03.q1k chr03 29 173 177760 177904 F 145 84.83 1297 reject_low 1 ALIGNMENT 751 YS2-2p03.q1k chr10 989 26 73391 74348 C 964 93.88 1297 accept 0 ALIGNMENT 0 YS2-2p03.q1k chr03 174 574 177904 177903 F 401 0.00 1297 reject_low 1 ALIGNMENT 723 YS2-2p03.p1k chr10 36 1056 68411 69431 F 1021 92.95 1187 accept 0 ALIGNMENT 929 YS2-2p04.p1k chr09 29 1095 309498 310573 F 1067 95.88 1208 accept 0 ALIGNMENT 828 YS2-2p04.q1k chr09 973 31 313018 313958 C 943 96.92 1272 accept 0 ALIGNMENT 938 YS2-2p05.p1k chr15 29 1143 990875 991992 F 1115 96.14 1283 accept 0 ALIGNMENT 622 YS2-2p05.q1k chr15 894 51 991193 992019 C 844 93.60 1350 accept 0 ALIGNMENT 748 YS2-2p07.p1k chr12 31 1237 392380 393607 F 1207 88.82 1261 accept 0 ALIGNMENT 715 YS2-2p07.q1k chr12 929 26 395839 396732 C 904 94.69 1345 accept 0 ALIGNMENT 0 YS2-2p08.p1k chr11 607 62 219622 219621 C 546 0.00 1277 reject_low 8 ALIGNMENT 0 YS2-2p08.p1k chr11 615 62 517703 517702 C 554 0.00 1277 reject_low 9 ALIGNMENT 0 YS2-2p08.p1k chr07 607 62 774435 774434 C 546 0.00 1277 reject_low 5 ALIGNMENT 0 YS2-2p08.p1k chr16 885 703 856885 856884 C 183 0.00 1277 reject_low 3 ALIGNMENT 220 YS2-2p08.p1k chr13 790 1111 768879 769207 F 322 90.68 1277 reject_low 1 ALIGNMENT 0 YS2-2p08.p1k chr11 885 691 517629 517628 C 195 0.00 1277 reject_low 9 ALIGNMENT 0 YS2-2p08.p1k chr04 885 690 410376 410375 C 196 0.00 1277 reject_low 2 ALIGNMENT 0 YS2-2p08.p1k chr08 689 885 146307 146306 F 197 0.00 1277 reject_low 6 ALIGNMENT 78 YS2-2p08.p1k chr04 689 600 410375 410464 C 90 96.67 1277 reject_low 2 ALIGNMENT 0 YS2-2p08.p1k chr10 62 607 197224 197223 F 546 0.00 1277 reject_low 7 ALIGNMENT 681 YS2-2p08.p1k chr13 35 794 767786 768546 F 760 97.89 1277 accept 0 ALIGNMENT 0 YS2-2p08.p1k chr11 885 689 219542 219541 C 197 0.00 1277 reject_low 8 ALIGNMENT 72 YS2-2p08.p1k chr08 607 688 146225 146307 F 82 97.56 1277 reject_low 6 ALIGNMENT 0 YS2-2p08.p1k chr13 795 885 768546 768545 F 91 0.00 1277 accept 0 ALIGNMENT 0 YS2-2p08.p1k chr13 689 885 321218 321217 F 197 0.00 1277 reject_low 11 ALIGNMENT 0 YS2-2p08.p1k chr04 599 62 410465 410464 C 538 0.00 1277 reject_low 2 ALIGNMENT 74 YS2-2p08.p1k chr16 702 616 856884 856970 C 87 95.40 1277 reject_low 3 ALIGNMENT 0 YS2-2p08.p1k chr12 62 614 656935 656934 F 553 0.00 1277 reject_low 4 ALIGNMENT 80 YS2-2p08.p1k chr07 689 608 774353 774434 C 82 100.00 1277 reject_low 5 ALIGNMENT 75 YS2-2p08.p1k chr12 615 700 656935 657022 F 86 96.51 1277 reject_low 4 ALIGNMENT 0 YS2-2p08.p1k chr07 885 690 774354 774353 C 196 0.00 1277 reject_low 5 ALIGNMENT 0 YS2-2p08.p1k chr13 62 789 768879 768878 F 728 0.00 1277 reject_low 1 ALIGNMENT 73 YS2-2p08.p1k chr11 688 608 219541 219621 C 81 97.53 1277 reject_low 8 ALIGNMENT 70 YS2-2p08.p1k chr06 616 688 204912 204984 F 73 100.00 1277 reject_low 10 ALIGNMENT 0 YS2-2p08.p1k chr08 62 606 146225 146224 F 545 0.00 1277 reject_low 6 ALIGNMENT 0 YS2-2p08.p1k chr10 689 885 197304 197303 F 197 0.00 1277 reject_low 7 ALIGNMENT 132 YS2-2p08.q1k chr13 890 608 768275 768546 C 283 85.87 1265|0,3 accept 0 ALIGNMENT 0 YS2-2p08.p1k chr06 689 885 204984 204983 F 197 0.00 1277 reject_low 10 ALIGNMENT 0 YS2-2p08.p1k chr12 701 885 657022 657021 F 185 0.00 1277 reject_low 4 ALIGNMENT 73 YS2-2p08.p1k chr10 608 688 197224 197304 F 81 97.53 1277 reject_low 7 ALIGNMENT 560 YS2-2p08.q1k chr13 612 1 768879 769489 C 612 98.20 1265|2,0 accept 0 ALIGNMENT 72 YS2-2p08.p1k chr11 690 616 517628 517702 C 75 100.00 1277 reject_low 9 ALIGNMENT 0 YS2-2p08.p1k chr13 62 615 321146 321145 F 554 0.00 1277 reject_low 11 ALIGNMENT 70 YS2-2p08.p1k chr13 616 688 321146 321218 F 73 100.00 1277 reject_low 11 ALIGNMENT 0 YS2-2p08.p1k chr06 62 615 204912 204911 F 554 0.00 1277 reject_low 10 ALIGNMENT 0 YS2-2p08.p1k chr16 615 62 856971 856970 C 554 0.00 1277 reject_low 3 ALIGNMENT 0 YS2-2p08.q1k chr13 610 611 768544 768880 C 0 0.00 1265 accept 0 ALIGNMENT 975 YS2-2p09.p1k chr04 1180 29 659878 661034 C 1152 96.01 1265 accept 0 ALIGNMENT 718 YS2-2p09.q1k chr04 19 906 658976 659851 F 888 95.38 1340 accept 0 ALIGNMENT 919 YS2-2p10.p1k chr15 1101 30 986979 988064 C 1072 95.80 1185 accept 0 ALIGNMENT 386 YS2-2p10.q1k chr15 1 497 985483 985969 F 497 93.96 1302 accept 0 ALIGNMENT 733 YS2-2p11.q1k chr11 26 872 254322 255160 F 847 96.93 1271 accept 0 ALIGNMENT 1006 YS2-2p11.p1k chr11 1214 30 257534 258714 C 1185 95.70 1242 accept 0 ALIGNMENT 933 YS2-2p12.p1k chr02 37 1147 436725 437850 F 1111 95.77 1224 accept 0 ALIGNMENT 334 YS2-2p12.q1k chr02 412 25 437898 438283 C 388 96.91 1553 accept 0 ALIGNMENT 999 YS2-2p13.p1k chr04 1252 31 87075 88309 C 1222 95.42 1291 accept 0 ALIGNMENT 479 YS2-2p13.q1k chr04 1 628 82193 82807 F 628 95.06 1434 accept 0 ALIGNMENT 689 YS2-2p15.p1k chr14 23 857 273702 274539 F 835 94.61 1320 accept 0 ALIGNMENT 665 YS2-2p15.q1k chr14 834 21 274472 275273 C 814 95.70 1456 accept 0 ALIGNMENT 417 YS2-2p16.q1k chr05 524 30 321264 321751 C 495 96.57 1484 accept 0 ALIGNMENT 1017 YS2-2p16.p1k chr05 31 1189 316243 317404 F 1159 97.24 1261 accept 0 ALIGNMENT 149 YS2-2p17.p1k chr11 198 36 329512 329675 C 163 98.77 217 accept 0 ALIGNMENT 0 YS2-2p17.p1k chr11 217 199 329513 329512 C 19 0.00 217 accept 0 ALIGNMENT 0 YS2-2p19.p1k chrm 814 874 48141 48140 F 61 0.00 1305 reject_low 8,10 ALIGNMENT 0 YS2-2p19.q1k chrm 533 93 76596 76595 C 441 0.00 1410 reject_low 17 ALIGNMENT 0 YS2-2p19.p1k vc_1 829 62 2473 2472 C 768 0.00 1305 reject_low 18 ALIGNMENT 0 YS2-2p19.p1k chrm 62 773 2095 2094 F 712 0.00 1305 reject_low 15 ALIGNMENT 35 YS2-2p19.p1k chrm 813 774 57032 57071 C 40 100.00 1305 reject_low 9 ALIGNMENT 0 YS2-2p19.p1k vc_1 829 62 2106 2105 C 768 0.00 1305 reject_low 1 ALIGNMENT 37 YS2-2p19.q1k chrm 102 53 52762 52811 C 50 92.00 1410 reject_low 8 ALIGNMENT 281 YS2-2p19.p1k vc_7 830 1270 100 534 F 441 89.80 1305 reject_low 5 ALIGNMENT 281 YS2-2p19.p1k vc_1 1270 830 1671 2105 C 441 89.80 1305 reject_low 1 ALIGNMENT 0 YS2-2p19.p1k chrm 874 814 33452 33451 C 61 0.00 1305 reject_low 16 ALIGNMENT 0 YS2-2p19.p1k chrm 874 814 57033 57032 C 61 0.00 1305 reject_low 9 ALIGNMENT 0 YS2-2p19.p1k chrm 62 773 48102 48101 F 712 0.00 1305 reject_low 8,10 ALIGNMENT 20 YS2-2p19.p1k vc_2 14 34 2125 2145 F 21 95.24 1305 reject_low 12 ALIGNMENT 35 YS2-2p19.p1k chrm 774 813 2095 2134 F 40 100.00 1305 reject_low 15 ALIGNMENT 176 YS2-2p19.q1k chrm 543 119 944 1350 C 425 91.76 1410 reject_bad_break 0 ALIGNMENT 281 YS2-2p19.p1k vc_2 1270 830 1671 2105 C 441 89.80 1305 reject_low 2 ALIGNMENT 35 YS2-2p19.q1k chrm 92 53 76595 76634 C 40 100.00 1410 reject_low 17 ALIGNMENT 281 YS2-2p19.p1k vc_5 1270 830 4591 5025 C 441 89.80 1305 reject_low 4 ALIGNMENT 0 YS2-2p19.p1k chrm 773 62 33490 33489 C 712 0.00 1305 reject_low 16 ALIGNMENT 34 YS2-2p19.q1k chrm 91 53 53828 53866 C 39 100.00 1410 reject_low 10 ALIGNMENT 0 YS2-2p19.p1k vc_3 829 62 2473 2472 C 768 0.00 1305 reject_low 19 ALIGNMENT 0 YS2-2p19.p1k vc_4 62 829 5871 5870 F 768 0.00 1305 reject_low 7 ALIGNMENT 0 YS2-2p19.p1k chrm 773 62 57072 57071 C 712 0.00 1305 reject_low 9 ALIGNMENT 0 YS2-2p19.p1k vc_1 35 874 2512 2511 F 840 0.00 1305 reject_low 11 ALIGNMENT 0 YS2-2p19.p1k chrm 814 874 2134 2133 F 61 0.00 1305 reject_low 15 ALIGNMENT 26 YS2-2p19.p1k vc_3 860 830 2441 2472 C 31 96.77 1305 reject_low 19 ALIGNMENT 0 YS2-2p19.p1k vc_2 35 874 2145 2144 F 840 0.00 1305 reject_low 12 ALIGNMENT 20 YS2-2p19.p1k vc_3 14 34 2492 2512 F 21 95.24 1305 reject_low 13 ALIGNMENT 20 YS2-2p19.p1k vc_4 34 14 5831 5851 C 21 95.24 1305 reject_low 14 ALIGNMENT 0 YS2-2p19.p1k vc_7 62 829 100 99 F 768 0.00 1305 reject_low 5 ALIGNMENT 35 YS2-2p19.q1k chrm 53 92 52334 52373 F 40 100.00 1410 reject_low 9 ALIGNMENT 0 YS2-2p19.p1k vc_2 829 62 2106 2105 C 768 0.00 1305 reject_low 2 ALIGNMENT 27 YS2-2p19.p1k chrm 813 774 33451 33489 C 40 95.00 1305 reject_low 16 ALIGNMENT 0 YS2-2p19.p1k vc_7 62 829 13562 13561 F 768 0.00 1305 reject_low 6 ALIGNMENT 281 YS2-2p19.p1k vc_3 1270 830 1671 2105 C 441 89.80 1305 reject_low 3 ALIGNMENT 20 YS2-2p19.p1k vc_1 14 34 2492 2512 F 21 95.24 1305 reject_low 11 ALIGNMENT 0 YS2-2p19.q1k chrm 543 544 909 943 C 0 0.00 1410 reject_bad_break 0 ALIGNMENT 26 YS2-2p19.p1k vc_1 860 830 2441 2472 C 31 96.77 1305 reject_low 18 ALIGNMENT 0 YS2-2p19.p1k vc_3 35 874 2512 2511 F 840 0.00 1305 reject_low 13 ALIGNMENT 0 YS2-2p19.q1k chrm 533 103 52763 52762 C 431 0.00 1410 reject_low 8 ALIGNMENT 0 YS2-2p19.p1k vc_4 874 35 5832 5831 C 840 0.00 1305 reject_low 14 ALIGNMENT 0 YS2-2p19.q1k chrm 533 92 53829 53828 C 442 0.00 1410 reject_low 10 ALIGNMENT 0 YS2-2p19.p1k chrm 748 874 1350 1349 F 127 0.00 1305 reject_bad_break 0 ALIGNMENT 257 YS2-2p19.p1k vc_4 830 1178 5871 6218 F 349 92.26 1305 reject_low 7 ALIGNMENT 0 YS2-2p19.p1k vc_5 829 62 5026 5025 C 768 0.00 1305 reject_low 4 ALIGNMENT 0 YS2-2p19.p1k vc_3 829 62 2106 2105 C 768 0.00 1305 reject_low 3 ALIGNMENT 69 YS2-2p19.q1k chrm 720 544 743 908 C 177 88.14 1410 reject_bad_break 0 ALIGNMENT 0 YS2-2p19.q1k chrm 93 533 52373 52372 F 441 0.00 1410 reject_low 9 ALIGNMENT 0 YS2-2p19.q1k chrm 118 62 1351 1350 C 57 0.00 1410 reject_bad_break 0 ALIGNMENT 321 YS2-2p19.p1k chrm 46 747 622 1350 F 702 90.46 1305 reject_bad_break 0 ALIGNMENT 281 YS2-2p19.p1k vc_7 830 1270 13562 13996 F 441 89.80 1305 reject_low 6 ALIGNMENT 35 YS2-2p19.p1k chrm 774 813 48102 48141 F 40 100.00 1305 reject_low 8,10 ALIGNMENT 896 YS2-2p20.p1k chr12 38 1006 281294 282265 F 969 98.25 1210 accept 0 ALIGNMENT 0 YS2-2p20.p1k chr11 821 146 576167 576166 C 676 0.00 1210 reject_low 1 ALIGNMENT 0 YS2-2p20.p1k chr11 121 62 576190 576189 C 60 0.00 1210 reject_low 1 ALIGNMENT 751 YS2-2p20.q1k chr12 879 31 285556 286400 C 849 97.29 1276 accept 0 ALIGNMENT 23 YS2-2p20.p1k chr11 145 122 576166 576189 C 24 100.00 1210 reject_low 1 ALIGNMENT 669 YS2-2p21.q1k chr07 37 830 202888 203677 F 794 96.35 1277 accept 0 ALIGNMENT 975 YS2-2p21.p1k chr07 1192 33 206582 207755 C 1160 95.95 1197 accept 0 ALIGNMENT 69 YS2-2p22.q1k chr16 151 80 338847 338918 C 72 100.00 1268 reject_low 4 ALIGNMENT 0 YS2-2p22.q1k chr15 62 79 710201 710200 F 18 0.00 1268 reject_low 3 ALIGNMENT 0 YS2-2p22.q1k chr10 561 152 517728 517727 C 410 0.00 1268 reject_low 1 ALIGNMENT 983 YS2-2p22.p1k chr03 1197 28 150050 151221 C 1170 96.58 1204 accept 0 ALIGNMENT 69 YS2-2p22.q1k chr05 80 151 100133 100204 F 72 100.00 1268 reject_low 2 ALIGNMENT 71 YS2-2p22.q1k chr10 151 76 517727 517802 C 76 98.68 1268 reject_low 1 ALIGNMENT 0 YS2-2p22.q1k chr16 79 62 338919 338918 C 18 0.00 1268 reject_low 4 ALIGNMENT 0 YS2-2p22.q1k chr15 152 561 710272 710271 F 410 0.00 1268 reject_low 3 ALIGNMENT 0 YS2-2p22.q1k chr16 561 152 338848 338847 C 410 0.00 1268 reject_low 4 ALIGNMENT 0 YS2-2p22.q1k chr05 152 561 100204 100203 F 410 0.00 1268 reject_low 2 ALIGNMENT 69 YS2-2p22.q1k chr15 80 151 710201 710272 F 72 100.00 1268 reject_low 3 ALIGNMENT 0 YS2-2p22.q1k chr05 62 79 100133 100132 F 18 0.00 1268 reject_low 2 ALIGNMENT 644 YS2-2p22.q1k chr03 32 833 149869 150656 F 802 96.13 1268 accept 0 ALIGNMENT 302 YS2-2p24.p1k chr09 658 79 330650 331228 C 580 85.52 1292 accept 0 ALIGNMENT 994 YS2-3a01.p1k chr16 31 1102 167165 168235 F 1072 98.51 1102 accept 0 ALIGNMENT 646 YS2-3a01.q1k chr16 779 31 170807 171545 C 749 96.93 1493 accept 0 ALIGNMENT 806 YS2-3a02.q1k chr16 25 1059 670277 671293 F 1035 95.27 1355 accept 0 ALIGNMENT 992 YS2-3a02.p1k chr16 1163 30 674737 675860 C 1134 97.62 1163 accept 0 ALIGNMENT 315 YS2-3a03.q1k vc_7 509 1 2058 2569 C 509 88.21 872 reject_vc 2 ALIGNMENT 269 YS2-3a03.q1k vc_3 1 297 2689 2987 F 297 97.31 872 reject_vc 6 ALIGNMENT 269 YS2-3a03.q1k vc_1 1 297 2689 2987 F 297 97.31 872 reject_vc 4 ALIGNMENT 315 YS2-3a03.q1k vc_5 1 509 2556 3067 F 509 88.41 872 reject_vc 1 ALIGNMENT 0 YS2-3a03.p1k chr13 277 259 139847 139846 C 19 0.00 277 accept 0 ALIGNMENT 36 YS2-3a03.q1k vc_7 400 303 4602 4699 C 98 80.61 872 reject_vc 7 ALIGNMENT 269 YS2-3a03.q1k vc_2 1 297 2322 2620 F 297 97.31 872 reject_vc 5 ALIGNMENT 0 YS2-3a03.q1k vc_7 53 54 5172 6360 C 0 0.00 872 reject_vc 7 ALIGNMENT 41 YS2-3a03.q1k vc_4 306 509 1879 2083 F 204 75.98 872 reject_vc 10 ALIGNMENT 40 YS2-3a03.q1k vc_4 297 238 51 112 C 60 90.00 872 reject_vc 8 ALIGNMENT 51 YS2-3a03.q1k vc_7 54 3 6360 6411 C 52 100.00 872|1,0 reject_vc 7 ALIGNMENT 299 YS2-3a03.q1k vc_4 400 1 5251 5654 C 400 92.25 872 reject_vc 3 ALIGNMENT 0 YS2-3a03.q1k vc_4 237 62 113 112 C 176 0.00 872 reject_vc 8 ALIGNMENT 40 YS2-3a03.q1k vc_4 238 297 1548 1609 F 60 90.00 872 reject_vc 10 ALIGNMENT 0 YS2-3a03.q1k vc_4 62 237 1548 1547 F 176 0.00 872 reject_vc 10 ALIGNMENT 0 YS2-3a03.q1k vc_7 302 298 4700 4925 C 5 0.00 872 reject_vc 7 ALIGNMENT 0 YS2-3a03.q1k vc_4 237 62 6340 6339 C 176 0.00 872 reject_vc 9 ALIGNMENT 0 YS2-3a03.q1k vc_4 298 305 1610 1878 F 8 0.00 872 reject_vc 10 ALIGNMENT 223 YS2-3a03.p1k chr13 258 31 139846 140073 C 228 100.00 277 accept 0 ALIGNMENT 40 YS2-3a03.q1k vc_4 297 238 6278 6339 C 60 90.00 872 reject_vc 9 ALIGNMENT 214 YS2-3a03.q1k vc_7 297 53 4926 5172 C 245 96.33 872|0,1 reject_vc 7 ALIGNMENT 370 YS2-3a04.p1k chr09 124 540 231549 231964 F 417 96.64 1167 reject_low 1 ALIGNMENT 0 YS2-3a04.p1k chr09 62 123 231549 231548 F 62 0.00 1167 reject_low 1 ALIGNMENT 882 YS2-3a04.q1k chr05 32 1105 303703 304765 F 1074 95.16 1368 accept 0 ALIGNMENT 0 YS2-3a04.p1k chr09 541 887 231964 231963 F 347 0.00 1167 reject_low 1 ALIGNMENT 1033 YS2-3a04.p1k chr05 1159 29 306152 307288 C 1131 98.14 1167 accept 0 ALIGNMENT 0 YS2-3a05.p1k chrm 202 500 6231 12355 F 299 0.00 685 reject_low 6 ALIGNMENT 21 YS2-3a05.p1k chrm 500 542 24867 24912 F 43 86.05 685 reject_low 9 ALIGNMENT 0 YS2-3a05.p1k chrm 62 162 6192 6191 F 101 0.00 685 reject_low 4,6 ALIGNMENT 0 YS2-3a05.q1k chrm 111 62 12403 12402 C 50 0.00 1344 reject_low 4 ALIGNMENT 32 YS2-3a05.p1k chrm 163 201 6192 6230 F 39 97.44 685 reject_low 4,6 ALIGNMENT 20 YS2-3a05.p1k chrm 536 499 6192 6231 C 38 89.47 685 reject_low 11 ALIGNMENT 0 YS2-3a05.p1k chrm 547 654 12402 12401 F 108 0.00 685 reject_low 6 ALIGNMENT 0 YS2-3a05.q1k chrm 456 158 6231 12355 C 299 0.00 1344 reject_low 4 ALIGNMENT 0 YS2-3a05.q1k chrm 122 418 24564 24563 F 297 0.00 1344 accept 0 ALIGNMENT 0 YS2-3a05.p1k chrm 654 503 24567 24566 C 152 0.00 685 accept 0 ALIGNMENT 0 YS2-3a05.q1k chrm 122 155 24565 24565 F 34 0.00 1344 reject_low 1 ALIGNMENT 30 YS2-3a05.p1k chrm 200 163 57822 57859 C 38 97.37 685 reject_low 7 ALIGNMENT 0 YS2-3a05.p1k chrm 654 537 6193 6192 C 118 0.00 685 reject_low 11 ALIGNMENT 25 YS2-3a05.q1k chrm 495 458 72793 72829 C 38 94.74 1344 reject_low 3 ALIGNMENT 27 YS2-3a05.q1k chrm 495 457 6193 6230 C 39 94.87 1344 reject_low 4 ALIGNMENT 0 YS2-3a05.p1k chrm 162 62 77099 77098 C 101 0.00 685 reject_low 5 ALIGNMENT 41 YS2-3a05.q1k chrm 157 112 12356 12402 C 46 97.83 1344 reject_low 4 ALIGNMENT 0 YS2-3a05.q1k chrm 418 159 24868 24867 C 260 0.00 1344 reject_low 6 ALIGNMENT 20 YS2-3a05.q1k chrm 122 159 6192 6231 F 38 89.47 1344 reject_low 10 ALIGNMENT 30 YS2-3a05.p1k chrm 163 200 72792 72829 F 38 97.37 685 reject_low 3 ALIGNMENT 0 YS2-3a05.p1k chrm 654 201 57823 57822 C 454 0.00 685 reject_low 7 ALIGNMENT 0 YS2-3a05.p1k chrm 498 62 6232 6231 C 437 0.00 685 reject_low 11 ALIGNMENT 0 YS2-3a05.p1k chrm 536 62 24565 24564 C 475 0.00 685 reject_low 2 ALIGNMENT 41 YS2-3a05.p1k chrm 501 546 12356 12402 F 46 97.83 685 reject_low 6 ALIGNMENT 0 YS2-3a05.p1k chrm 162 62 57860 57859 C 101 0.00 685 reject_low 7 ALIGNMENT 0 YS2-3a05.p1k chrm 62 162 84762 84761 F 101 0.00 685 reject_low 8 ALIGNMENT 395 YS2-3a05.p1k chrm 502 36 24566 25031 C 467 98.93 685 accept 0 ALIGNMENT 30 YS2-3a05.p1k chrm 163 200 84762 84799 F 38 97.37 685 reject_low 8 ALIGNMENT 83 YS2-3a05.q1k chrm 1 121 24444 24564 F 121 95.04 1344 accept 0 reject_low 1 ALIGNMENT 21 YS2-3a05.q1k chrm 158 116 24867 24912 C 43 86.05 1344 reject_low 6 ALIGNMENT 0 YS2-3a05.q1k chrm 160 418 6231 6230 F 259 0.00 1344 reject_low 10 ALIGNMENT 327 YS2-3a05.q1k chrm 156 632 24566 25027 F 477 95.39 1344 reject_low 1 ALIGNMENT 0 YS2-3a05.q1k chrm 457 62 72830 72829 C 396 0.00 1344 reject_low 3 ALIGNMENT 0 YS2-3a05.p1k chrm 62 499 24867 24866 F 438 0.00 685 reject_low 9 ALIGNMENT 0 YS2-3a05.p1k chrm 201 654 84799 84798 F 454 0.00 685 reject_low 8 ALIGNMENT 35 YS2-3a05.p1k chrm 207 163 77054 77098 C 45 93.33 685 reject_low 5 ALIGNMENT 0 YS2-3a05.p1k chrm 543 654 24912 24911 F 112 0.00 685 reject_low 9 ALIGNMENT 0 YS2-3a05.p1k chrm 62 162 72792 72791 F 101 0.00 685 reject_low 3 ALIGNMENT 108 YS2-3a05.p1k chrm 667 537 24433 24564 C 131 99.24 685 reject_low 2 ALIGNMENT 0 YS2-3a05.p1k chrm 202 654 6230 6229 F 453 0.00 685 reject_low 4 ALIGNMENT 0 YS2-3a05.p1k chrm 201 654 72829 72828 F 454 0.00 685 reject_low 3 ALIGNMENT 0 YS2-3a05.p1k chrm 654 208 77055 77054 C 447 0.00 685 reject_low 5 ALIGNMENT 0 YS2-3a05.q1k chrm 115 62 24913 24912 C 54 0.00 1344 reject_low 6 ALIGNMENT 0 YS2-3a05.q1k chrm 62 121 6192 6191 F 60 0.00 1344 reject_low 10 ALIGNMENT 991 YS2-3a06.p1k chr09 1254 120 227036 228159 C 1135 97.27 1284 accept 0 ALIGNMENT 754 YS2-3a06.q1k chr14 1014 29 758180 759174 C 986 93.81 1313 ambiguous_tel 1 ALIGNMENT 818 YS2-3a07.q1k chr02 29 1078 157564 158605 F 1050 94.19 1393 accept 0 ALIGNMENT 989 YS2-3a07.p1k chr02 1109 30 162976 164055 C 1080 97.69 1114 accept 0 ALIGNMENT 305 YS2-3a07.p1k chr02 157 1038 416016 416897 F 882 78.34 1114 reject_low 1 ALIGNMENT 0 YS2-3a07.p1k chr02 62 156 416016 416015 F 95 0.00 1114 reject_low 1 ALIGNMENT 1061 YS2-3a08.p1k chr02 1175 29 439550 440699 C 1147 98.34 1175 accept 0 ALIGNMENT 743 YS2-3a08.q1k chr02 30 887 434986 435836 F 858 97.09 1497 accept 0 ALIGNMENT 910 YS2-3a09.p1k chr02 1100 35 422264 423342 C 1066 96.81 1103 accept 0 ALIGNMENT 819 YS2-3a09.q1k chr02 35 1069 417423 418448 F 1035 95.07 1331 accept 0 ALIGNMENT 0 YS2-3a10.p1k chr13 355 337 62454 62453 C 19 0.00 355 accept 0 ALIGNMENT 201 YS2-3a10.q1k vc_7 278 1 2293 2569 C 278 92.45 802 reject_vc 6 ALIGNMENT 201 YS2-3a10.q1k vc_1 1 278 2689 2965 F 278 92.45 802 reject_vc 3 ALIGNMENT 204 YS2-3a10.q1k vc_5 1 389 2556 2944 F 389 86.38 802 reject_vc 1 ALIGNMENT 300 YS2-3a10.p1k chr13 336 31 62453 62758 C 306 100.00 355 accept 0 ALIGNMENT 201 YS2-3a10.q1k vc_3 1 278 2689 2965 F 278 92.45 802 reject_vc 5 ALIGNMENT 201 YS2-3a10.q1k vc_2 1 278 2322 2598 F 278 92.45 802 reject_vc 4 ALIGNMENT 197 YS2-3a10.q1k vc_4 389 1 5264 5654 C 389 85.86 802 reject_vc 2 ALIGNMENT 0 YS2-3a10.q1k vc_7 53 54 5172 6360 C 0 0.00 802 reject_vc 7 ALIGNMENT 51 YS2-3a10.q1k vc_7 54 3 6360 6411 C 52 100.00 802|1,0 reject_vc 7 ALIGNMENT 147 YS2-3a10.q1k vc_7 278 53 4948 5172 C 226 90.27 802|0,1 reject_vc 7 ALIGNMENT 977 YS2-3a11.p1k chr07 35 1123 314581 315675 F 1089 97.52 1124 accept 0 ALIGNMENT 747 YS2-3a11.q1k chr07 980 31 318015 318950 C 950 95.68 1354 accept 0 ALIGNMENT 864 YS2-3a12.q1k chr07 1068 27 624847 625889 C 1042 95.01 1355 accept 0 ALIGNMENT 925 YS2-3a12.p1k chr07 29 1112 621388 622484 F 1084 95.48 1155 accept 0 ALIGNMENT 248 YS2-3a14.q1k vc_3 1 299 2689 2984 F 299 95.32 997 reject_vc 6 ALIGNMENT 147 YS2-3a14.p1k chr12 28 207 614290 614468 F 180 97.78 225 accept 0 ALIGNMENT 242 YS2-3a14.q1k vc_4 367 1 5295 5654 C 367 91.01 997 reject_vc 3 ALIGNMENT 194 YS2-3a14.q1k vc_7 299 53 4929 5172 C 247 93.93 997|0,1 reject_vc 7 ALIGNMENT 51 YS2-3a14.q1k vc_7 54 3 6360 6411 C 52 100.00 997|1,0 reject_vc 7 ALIGNMENT 0 YS2-3a14.q1k vc_7 53 54 5172 6360 C 0 0.00 997 reject_vc 7 ALIGNMENT 0 YS2-3a14.p1k chr12 208 225 614468 614467 F 18 0.00 225 accept 0 ALIGNMENT 248 YS2-3a14.q1k vc_1 1 299 2689 2984 F 299 95.32 997 reject_vc 4 ALIGNMENT 249 YS2-3a14.q1k vc_7 367 1 2212 2569 C 367 91.55 997 reject_vc 2 ALIGNMENT 248 YS2-3a14.q1k vc_2 1 299 2322 2617 F 299 95.32 997 reject_vc 5 ALIGNMENT 249 YS2-3a14.q1k vc_5 1 367 2556 2913 F 367 91.28 997 reject_vc 1 ALIGNMENT 0 YS2-3a17.p1k chr13 398 62 884796 884795 C 337 0.00 1082 reject_low 2 ALIGNMENT 33 YS2-3a17.q1k chr13 108 208 884146 884246 F 101 79.21 1265 reject_low 2 ALIGNMENT 744 YS2-3a17.q1k chr12 30 917 813159 814059 F 888 95.83 1265 accept 0 ALIGNMENT 121 YS2-3a17.p1k chr13 838 399 884356 884795 C 440 76.59 1082 reject_low 2 ALIGNMENT 923 YS2-3a17.p1k chr12 1077 29 813206 814265 C 1049 96.66 1082 accept 0 ALIGNMENT 0 YS2-3a17.q1k chr13 209 308 884247 884340 F 100 0.00 1265 reject_low 2 ALIGNMENT 470 YS2-3a17.p1k chr07 974 29 551646 552593 C 946 83.62 1082 reject_low 1 ALIGNMENT 0 YS2-3a17.p1k chr13 854 839 884357 884356 C 16 0.00 1082 reject_low 2 ALIGNMENT 128 YS2-3a17.q1k chr13 309 763 884341 884795 F 455 76.92 1265 reject_low 2 ALIGNMENT 422 YS2-3a17.q1k chr07 30 807 551487 552268 F 778 85.73 1265 reject_low 1 ALIGNMENT 0 YS2-3a17.q1k chr13 92 107 884146 884145 F 16 0.00 1265 reject_low 2 ALIGNMENT 753 YS2-3a18.q1k chr07 897 25 767324 768188 C 873 97.14 1416 accept 0 ALIGNMENT 0 YS2-3a18.p1k chr16 247 808 839317 839316 F 562 0.00 1122 reject_low 1 ALIGNMENT 882 YS2-3a18.p1k chr07 31 1039 764966 765991 F 1009 96.53 1122 accept 0 ALIGNMENT 146 YS2-3a18.p1k chr16 31 246 839101 839317 F 216 89.81 1122 reject_low 1 ALIGNMENT 178 YS2-3a19.p1k chr09 27 255 30738 30964 F 229 95.20 273 accept 0 ALIGNMENT 0 YS2-3a19.p1k chr09 256 273 30964 30963 F 18 0.00 273 accept 0 ALIGNMENT 195 YS2-3a22.p1k chr10 30 237 195682 195889 F 208 99.52 255 accept 0 ALIGNMENT 0 YS2-3a22.p1k chr10 238 255 195889 195888 F 18 0.00 255 accept 0 ALIGNMENT 0 YS2-3a24.p1k chr15 565 832 347483 347482 F 268 0.00 1085 reject_low 1 ALIGNMENT 0 YS2-3a24.p1k chr15 62 544 347464 347463 F 483 0.00 1085 reject_low 1 ALIGNMENT 984 YS2-3a24.p1k chr15 1084 27 346943 348001 C 1058 98.49 1085 accept 0 ALIGNMENT 20 YS2-3a24.p1k chr15 545 564 347464 347483 F 20 100.00 1085 reject_low 1 ALIGNMENT 0 YS2-3b01.q1k chr02 62 90 265173 265172 F 29 0.00 1432 reject_low 19 ALIGNMENT 0 YS2-3b01.p1k chr07 62 266 817424 817423 F 205 0.00 625 reject_low 4 ALIGNMENT 27 YS2-3b01.p1k chr03 572 607 168541 168576 F 36 91.67 625 reject_low 44 ALIGNMENT 100 YS2-3b01.p1k chr03 521 248 149531 149799 C 274 82.85 625 reject_low 46 ALIGNMENT 0 YS2-3b01.q1k chr14 509 411 96611 96610 C 99 0.00 1432 reject_low 9 ALIGNMENT 0 YS2-3b01.q1k chr02 385 509 259881 259880 F 125 0.00 1432 reject_low 5 ALIGNMENT 0 YS2-3b01.p1k chr15 266 62 600709 600708 C 205 0.00 625 reject_low 34 ALIGNMENT 0 YS2-3b01.p1k chr01 573 625 160575 160574 F 53 0.00 625 reject_low 7 ALIGNMENT 0 YS2-3b01.q1k chr02 62 90 259588 259587 F 29 0.00 1432 reject_low 5 ALIGNMENT 0 YS2-3b01.q1k chr01 86 62 160568 160567 C 25 0.00 1432 reject_low 40 ALIGNMENT 0 YS2-3b01.q1k chr13 90 62 362906 362905 C 29 0.00 1432 reject_low 2 ALIGNMENT 0 YS2-3b01.p1k chr04 625 573 802901 802900 C 53 0.00 625 reject_low 38 ALIGNMENT 0 YS2-3b01.p1k chr02 625 573 221041 221040 C 53 0.00 625 reject_low 31 ALIGNMENT 0 YS2-3b01.p1k chr07 573 625 823311 823310 F 53 0.00 625 reject_low 32 ALIGNMENT 0 YS2-3b01.q1k chr07 385 509 817384 817383 F 125 0.00 1432 reject_low 48 ALIGNMENT 256 YS2-3b01.q1k chr02 91 384 259588 259881 F 294 97.62 1432 reject_low 5 ALIGNMENT 509 YS2-3b01.q1k chr04 44 623 1175273 1175850 F 580 97.07 1432 accept_chi 0 ALIGNMENT 276 YS2-3b01.p1k chr02 572 241 226624 226955 C 332 96.08 625 reject_low 3 ALIGNMENT 0 YS2-3b01.p1k chr15 266 62 595127 595126 C 205 0.00 625 reject_low 33 ALIGNMENT 279 YS2-3b01.p1k chr14 241 572 96610 96941 F 332 96.39 625 reject_low 25 ALIGNMENT 252 YS2-3b01.q1k chr02 91 392 221052 221355 F 302 96.36 1432 reject_low 3 ALIGNMENT 267 YS2-3b01.p1k chr15 572 267 600403 600708 C 306 97.71 625 reject_low 34 ALIGNMENT 0 YS2-3b01.q1k chr07 62 90 401974 401973 F 29 0.00 1432 reject_low 14 ALIGNMENT 0 YS2-3b01.q1k chr13 509 411 357005 357004 C 99 0.00 1432 reject_low 13 ALIGNMENT 25 YS2-3b01.p1k chr07 574 607 401778 401811 F 34 91.18 625 reject_low 45 ALIGNMENT 276 YS2-3b01.p1k chr13 240 572 362585 362917 F 333 96.10 625 reject_low 26 ALIGNMENT 0 YS2-3b01.q1k chr07 509 385 823007 823006 C 125 0.00 1432 reject_low 4 ALIGNMENT 0 YS2-3b01.q1k chr03 129 62 168878 168877 C 68 0.00 1432 reject_low 41 ALIGNMENT 0 YS2-3b01.p1k chr01 62 239 165826 165825 F 178 0.00 625 reject_low 43 ALIGNMENT 175 YS2-3b01.q1k chr01 410 87 160239 160567 C 324 86.73 1432 reject_low 40 ALIGNMENT 267 YS2-3b01.p1k chr11 241 572 457783 458114 F 332 95.18 625 reject_low 30 ALIGNMENT 0 YS2-3b01.q1k chr14 90 62 96930 96929 C 29 0.00 1432 reject_low 9 ALIGNMENT 257 YS2-3b01.p1k chr04 572 240 802900 803231 C 333 94.29 625 reject_low 38 ALIGNMENT 0 YS2-3b01.p1k chr15 625 573 594822 594821 C 53 0.00 625 reject_low 33 ALIGNMENT 46 YS2-3b01.q1k chr07 276 384 817278 817384 F 109 83.49 1432 reject_low 48 ALIGNMENT 0 YS2-3b01.p1k chr13 62 239 362585 362584 F 178 0.00 625 reject_low 26 ALIGNMENT 267 YS2-3b01.p1k chr07 572 241 401962 402293 C 332 95.18 625 reject_low 29 ALIGNMENT 0 YS2-3b01.p1k chr03 625 573 151519 151518 C 53 0.00 625 reject_low 8 ALIGNMENT 0 YS2-3b01.q1k chr11 509 411 457784 457783 C 99 0.00 1432 reject_low 15 ALIGNMENT 0 YS2-3b01.q1k chr13 385 509 190057 190056 F 125 0.00 1432 reject_low 23 ALIGNMENT 0 YS2-3b01.p1k chr08 573 625 543941 543940 F 53 0.00 625 reject_low 6 ALIGNMENT 0 YS2-3b01.p1k chr02 266 62 265467 265466 C 205 0.00 625 reject_low 5 ALIGNMENT 0 YS2-3b01.q1k chr07 393 509 535528 535527 F 117 0.00 1432 reject_low 16 ALIGNMENT 197 YS2-3b01.p1k chr03 298 572 142803 143077 F 275 92.73 625 reject_low 42 ALIGNMENT 0 YS2-3b01.p1k chr11 573 625 458114 458113 F 53 0.00 625 reject_low 30 ALIGNMENT 262 YS2-3b01.q1k chr13 410 91 357004 357323 C 320 95.62 1432 reject_low 13 ALIGNMENT 0 YS2-3b01.p1k chr13 573 625 362917 362916 F 53 0.00 625 reject_low 26 ALIGNMENT 261 YS2-3b01.p1k chr03 241 572 124131 124462 F 332 94.58 625 reject_low 35 ALIGNMENT 253 YS2-3b01.q1k chr07 91 410 401974 402293 F 320 94.69 1432 reject_low 14 ALIGNMENT 0 YS2-3b01.p1k chr13 62 240 357004 357003 F 179 0.00 625 reject_low 2 ALIGNMENT 48 YS2-3b01.q1k chr03 570 411 168390 168546 C 160 78.75 1432|0,1 reject_low 41 ALIGNMENT 0 YS2-3b01.q1k chr03 62 90 151530 151529 F 29 0.00 1432 reject_low 17 ALIGNMENT 267 YS2-3b01.p1k chr02 572 267 265161 265466 C 306 97.71 625 reject_low 5 ALIGNMENT 0 YS2-3b01.q1k chr02 62 90 221052 221051 F 29 0.00 1432 reject_low 3 ALIGNMENT 0 YS2-3b01.p1k chr02 625 573 265162 265161 C 53 0.00 625 reject_low 5 ALIGNMENT 273 YS2-3b01.p1k chr07 572 241 535215 535546 C 332 95.78 625 reject_low 27 ALIGNMENT 0 YS2-3b01.q1k chr07 90 62 823300 823299 C 29 0.00 1432 reject_low 4 ALIGNMENT 259 YS2-3b01.q1k chr07 384 91 823006 823299 C 294 97.96 1432 reject_low 4 ALIGNMENT 267 YS2-3b01.p1k chr07 267 572 817424 817729 F 306 97.71 625 reject_low 4 ALIGNMENT 0 YS2-3b01.p1k chr03 240 239 168546 168593 F 0 0.00 625 reject_low 36 ALIGNMENT 0 YS2-3b01.p1k chr07 62 573 401778 401777 F 512 0.00 625 reject_low 45 ALIGNMENT 0 YS2-3b01.p1k chr04 625 608 1175274 1175273 C 18 0.00 625 accept_chi 1 ALIGNMENT 0 YS2-3b01.p1k chr03 62 240 124131 124130 F 179 0.00 625 reject_low 35 ALIGNMENT 259 YS2-3b01.q1k chr07 384 91 817424 817717 C 294 97.96 1432 reject_low 20 ALIGNMENT 0 YS2-3b01.p1k chr07 240 62 402294 402293 C 179 0.00 625 reject_low 29 ALIGNMENT 0 YS2-3b01.p1k chr03 625 522 149532 149531 C 104 0.00 625 reject_low 46 ALIGNMENT 0 YS2-3b01.q1k chr07 62 90 931703 931702 F 29 0.00 1432 reject_low 10 ALIGNMENT 65 YS2-3b01.p1k chr15 442 325 594642 594759 C 118 88.14 625 reject_low 47 ALIGNMENT 0 YS2-3b01.p1k chr07 573 625 817729 817728 F 53 0.00 625 reject_low 4 ALIGNMENT 0 YS2-3b01.q1k chr01 509 411 160240 160239 C 99 0.00 1432 reject_low 40 ALIGNMENT 256 YS2-3b01.q1k chr08 384 91 543636 543929 C 294 97.62 1432 reject_low 22 ALIGNMENT 0 YS2-3b01.p1k chr08 62 266 543636 543635 F 205 0.00 625 reject_low 6 ALIGNMENT 0 YS2-3b01.p1k chr07 625 573 931692 931691 C 53 0.00 625 reject_low 28 ALIGNMENT 0 YS2-3b01.p1k chr15 324 62 594760 594759 C 263 0.00 625 reject_low 47 ALIGNMENT 253 YS2-3b01.q1k chr08 384 91 549332 549625 C 294 97.28 1432 reject_low 6 ALIGNMENT 0 YS2-3b01.q1k chr02 385 509 265466 265465 F 125 0.00 1432 reject_low 19 ALIGNMENT 0 YS2-3b01.p1k chr07 625 376 817279 817278 C 250 0.00 625 reject_low 49 ALIGNMENT 0 YS2-3b01.p1k chr02 266 62 259882 259881 C 205 0.00 625 reject_low 37 ALIGNMENT 256 YS2-3b01.q1k chr13 91 384 189764 190057 F 294 97.62 1432 reject_low 23 ALIGNMENT 54 YS2-3b01.p1k chr03 81 240 168390 168546 F 160 80.00 625|0,1 reject_low 36 ALIGNMENT 0 YS2-3b01.p1k chr11 62 240 517095 517094 F 179 0.00 625 reject_low 24 ALIGNMENT 0 YS2-3b01.q1k chr03 86 62 143070 143069 C 25 0.00 1432 reject_low 39 ALIGNMENT 0 YS2-3b01.p1k chr11 574 625 517427 517426 F 52 0.00 625 reject_low 24 ALIGNMENT 259 YS2-3b01.q1k chr07 91 392 535227 535528 F 302 97.02 1432 reject_low 16 ALIGNMENT 263 YS2-3b01.q1k chr13 411 91 362585 362905 C 321 95.64 1432 reject_low 2 ALIGNMENT 0 YS2-3b01.p1k chr11 62 240 457783 457782 F 179 0.00 625 reject_low 30 ALIGNMENT 0 YS2-3b01.q1k chr07 411 509 402293 402292 F 99 0.00 1432 reject_low 14 ALIGNMENT 193 YS2-3b01.q1k chr03 353 87 142803 143069 C 267 92.88 1432 reject_low 39 ALIGNMENT 263 YS2-3b01.p1k chr02 572 240 221040 221374 C 333 94.89 625 reject_low 31 ALIGNMENT 267 YS2-3b01.p1k chr07 267 572 823006 823311 F 306 97.71 625 reject_low 32 ALIGNMENT 0 YS2-3b01.q1k chr15 385 509 600708 600707 F 125 0.00 1432 reject_low 21 ALIGNMENT 0 YS2-3b01.p1k chr14 573 625 96941 96940 F 53 0.00 625 reject_low 25 ALIGNMENT 0 YS2-3b01.p1k chr07 266 62 817385 817384 C 205 0.00 625 reject_low 49 ALIGNMENT 0 YS2-3b01.p1k chr13 573 625 357335 357334 F 53 0.00 625 reject_low 2 ALIGNMENT 185 YS2-3b01.p1k chr01 241 572 160239 160575 F 332 87.35 625 reject_low 7 ALIGNMENT 262 YS2-3b01.q1k chr11 410 91 517095 517414 C 320 95.62 1432 reject_low 12 ALIGNMENT 0 YS2-3b01.p1k chr02 240 62 226956 226955 C 179 0.00 625 reject_low 3 ALIGNMENT 0 YS2-3b01.q1k chr11 509 411 517096 517095 C 99 0.00 1432 reject_low 12 ALIGNMENT 0 YS2-3b01.q1k chr03 509 411 124132 124131 C 99 0.00 1432 reject_low 18 ALIGNMENT 0 YS2-3b01.q1k chr03 509 354 142804 142803 C 156 0.00 1432 reject_low 39 ALIGNMENT 0 YS2-3b01.q1k chr07 90 62 817718 817717 C 29 0.00 1432 reject_low 20 ALIGNMENT 0 YS2-3b01.q1k chr07 62 90 535227 535226 F 29 0.00 1432 reject_low 16 ALIGNMENT 0 YS2-3b01.p1k chr07 62 266 823006 823005 F 205 0.00 625 reject_low 32 ALIGNMENT 0 YS2-3b01.q1k chr07 62 275 817278 817277 F 214 0.00 1432 reject_low 48 ALIGNMENT 0 YS2-3b01.p1k chr03 247 62 149800 149799 C 186 0.00 625 reject_low 46 ALIGNMENT 0 YS2-3b01.p1k chr03 573 625 124462 124461 F 53 0.00 625 reject_low 35 ALIGNMENT 253 YS2-3b01.q1k chr11 410 91 457783 458102 C 320 94.69 1432 reject_low 15 ALIGNMENT 0 YS2-3b01.p1k chr14 62 240 96610 96609 F 179 0.00 625 reject_low 25 ALIGNMENT 176 YS2-3b01.q1k chr01 411 87 165826 166155 C 325 86.77 1432 reject_low 7 ALIGNMENT 0 YS2-3b01.q1k chr01 86 62 166156 166155 C 25 0.00 1432 reject_low 7 ALIGNMENT 0 YS2-3b01.q1k chr02 411 509 226955 226954 F 99 0.00 1432 reject_low 11 ALIGNMENT 0 YS2-3b01.q1k chr07 412 509 932023 932022 F 98 0.00 1432 reject_low 10 ALIGNMENT 0 YS2-3b01.p1k chr07 239 62 932024 932023 C 178 0.00 625 reject_low 28 ALIGNMENT 246 YS2-3b01.q1k chr03 91 411 151530 151849 F 321 94.08 1432 reject_low 17 ALIGNMENT 0 YS2-3b01.p1k chr07 625 573 401963 401962 C 53 0.00 625 reject_low 29 ALIGNMENT 0 YS2-3b01.p1k chr02 625 573 259577 259576 C 53 0.00 625 reject_low 37 ALIGNMENT 259 YS2-3b01.q1k chr15 91 384 600415 600708 F 294 97.96 1432 reject_low 21 ALIGNMENT 0 YS2-3b01.q1k chr03 62 129 149531 149530 F 68 0.00 1432 reject_low 8 ALIGNMENT 267 YS2-3b01.p1k chr15 572 267 594821 595126 C 306 97.71 625 reject_low 33 ALIGNMENT 46 YS2-3b01.p1k chr07 375 267 817278 817384 C 109 83.49 625 reject_low 49 ALIGNMENT 0 YS2-3b01.p1k chr04 239 62 803232 803231 C 178 0.00 625 reject_low 38 ALIGNMENT 0 YS2-3b01.p1k chr15 625 443 594643 594642 C 183 0.00 625 reject_low 47 ALIGNMENT 0 YS2-3b01.p1k chr15 625 573 600404 600403 C 53 0.00 625 reject_low 34 ALIGNMENT 270 YS2-3b01.p1k chr07 572 240 931691 932023 C 333 95.50 625 reject_low 28 ALIGNMENT 0 YS2-3b01.p1k chr01 62 240 160239 160238 F 179 0.00 625 reject_low 7 ALIGNMENT 0 YS2-3b01.q1k chr08 90 62 549626 549625 C 29 0.00 1432 reject_low 6 ALIGNMENT 259 YS2-3b01.q1k chr02 91 384 265173 265466 F 294 97.96 1432 reject_low 19 ALIGNMENT 0 YS2-3b01.p1k chr07 240 62 535547 535546 C 179 0.00 625 reject_low 27 ALIGNMENT 0 YS2-3b01.q1k chr03 90 62 124451 124450 C 29 0.00 1432 reject_low 18 ALIGNMENT 0 YS2-3b01.q1k chr11 90 62 517415 517414 C 29 0.00 1432 reject_low 12 ALIGNMENT 0 YS2-3b01.q1k chr13 90 62 357324 357323 C 29 0.00 1432 reject_low 13 ALIGNMENT 0 YS2-3b01.q1k chr08 509 385 549333 549332 C 125 0.00 1432 reject_low 6 ALIGNMENT 560 YS2-3b01.p1k chr04 607 30 1175273 1175850 C 578 100.00 625 accept_chi 1 ALIGNMENT 0 YS2-3b01.q1k chr08 509 385 543637 543636 C 125 0.00 1432 reject_low 22 ALIGNMENT 0 YS2-3b01.p1k chr02 239 62 221375 221374 C 178 0.00 625 reject_low 31 ALIGNMENT 0 YS2-3b01.p1k chr03 62 80 168390 168389 F 19 0.00 625 reject_low 36 ALIGNMENT 127 YS2-3b01.p1k chr03 239 572 168593 168928 F 334 82.04 625|1,0 reject_low 36 ALIGNMENT 247 YS2-3b01.q1k chr03 410 91 124131 124450 C 320 94.06 1432 reject_low 18 ALIGNMENT 0 YS2-3b01.q1k chr08 90 62 543930 543929 C 29 0.00 1432 reject_low 22 ALIGNMENT 0 YS2-3b01.p1k chr03 250 62 151839 151838 C 189 0.00 625 reject_low 8 ALIGNMENT 115 YS2-3b01.q1k chr03 412 130 168593 168877 C 283 83.04 1432|1,0 reject_low 41 ALIGNMENT 187 YS2-3b01.p1k chr01 240 573 165826 166164 F 334 87.43 625 reject_low 43 ALIGNMENT 0 YS2-3b01.q1k chr03 411 412 168546 168593 C 0 0.00 1432 reject_low 41 ALIGNMENT 0 YS2-3b01.q1k chr15 62 90 600415 600414 F 29 0.00 1432 reject_low 21 ALIGNMENT 0 YS2-3b01.p1k chr07 625 573 535216 535215 C 53 0.00 625 reject_low 27 ALIGNMENT 0 YS2-3b01.q1k chr13 509 412 362586 362585 C 98 0.00 1432 reject_low 2 ALIGNMENT 262 YS2-3b01.q1k chr02 91 410 226636 226955 F 320 95.62 1432 reject_low 11 ALIGNMENT 0 YS2-3b01.q1k chr03 412 509 151849 151848 F 98 0.00 1432 reject_low 17 ALIGNMENT 0 YS2-3b01.p1k chr03 62 297 142803 142802 F 236 0.00 625 reject_low 42 ALIGNMENT 0 YS2-3b01.p1k chr02 625 573 226625 226624 C 53 0.00 625 reject_low 3 ALIGNMENT 0 YS2-3b01.q1k chr02 393 509 221355 221354 F 117 0.00 1432 reject_low 3 ALIGNMENT 0 YS2-3b01.p1k chr03 573 625 143077 143076 F 53 0.00 625 reject_low 42 ALIGNMENT 0 YS2-3b01.p1k chr07 608 625 401811 401810 F 18 0.00 625 reject_low 45 ALIGNMENT 263 YS2-3b01.q1k chr07 91 411 931703 932023 F 321 95.64 1432 reject_low 10 ALIGNMENT 277 YS2-3b01.p1k chr11 241 573 517095 517427 F 333 96.10 625 reject_low 24 ALIGNMENT 0 YS2-3b01.q1k chr07 509 385 817425 817424 C 125 0.00 1432 reject_low 20 ALIGNMENT 0 YS2-3b01.p1k chr03 62 571 168541 168540 F 510 0.00 625 reject_low 44 ALIGNMENT 0 YS2-3b01.p1k chr01 574 625 166164 166163 F 52 0.00 625 reject_low 43 ALIGNMENT 0 YS2-3b01.p1k chr03 608 625 168576 168575 F 18 0.00 625 reject_low 44 ALIGNMENT 0 YS2-3b01.q1k chr13 62 90 189764 189763 F 29 0.00 1432 reject_low 23 ALIGNMENT 276 YS2-3b01.p1k chr13 241 572 357004 357335 F 332 96.08 625 reject_low 2 ALIGNMENT 254 YS2-3b01.p1k chr03 572 251 151518 151838 C 322 95.03 625 reject_low 8 ALIGNMENT 264 YS2-3b01.p1k chr02 572 267 259576 259881 C 306 97.39 625 reject_low 37 ALIGNMENT 265 YS2-3b01.q1k chr14 410 91 96610 96929 C 320 95.94 1432 reject_low 9 ALIGNMENT 98 YS2-3b01.q1k chr03 130 381 149531 149778 F 252 83.33 1432 reject_low 8 ALIGNMENT 0 YS2-3b01.q1k chr11 90 62 458103 458102 C 29 0.00 1432 reject_low 15 ALIGNMENT 0 YS2-3b01.q1k chr03 382 509 149778 149777 F 128 0.00 1432 reject_low 8 ALIGNMENT 0 YS2-3b01.q1k chr01 509 412 165827 165826 C 98 0.00 1432 reject_low 7 ALIGNMENT 0 YS2-3b01.q1k chr02 62 90 226636 226635 F 29 0.00 1432 reject_low 11 ALIGNMENT 264 YS2-3b01.p1k chr08 267 572 543636 543941 F 306 97.39 625 reject_low 6 ALIGNMENT 0 YS2-3b01.p1k chr03 573 625 168928 168927 F 53 0.00 625 reject_low 36 ALIGNMENT 75 YS2-3b04.p1k chr01 30 111 139174 139256 F 82 97.56 1071 reject_low 5 ALIGNMENT 802 YS2-3b04.p1k chr15 30 1065 464471 465521 F 1036 93.63 1071 accept 0 ALIGNMENT 82 YS2-3b04.p1k chr12 30 120 92567 92657 F 91 97.80 1071 reject_low 2 ALIGNMENT 74 YS2-3b04.p1k chr15 30 115 301117 301202 F 86 95.35 1071 reject_low 8 ALIGNMENT 0 YS2-3b04.p1k chr14 112 639 547197 547196 F 528 0.00 1071 reject_low 7 ALIGNMENT 0 YS2-3b04.p1k chr15 116 639 301202 301201 F 524 0.00 1071 reject_low 8 ALIGNMENT 0 YS2-3b04.p1k chr06 121 639 101481 101480 F 519 0.00 1071 reject_low 3 ALIGNMENT 75 YS2-3b04.p1k chr08 111 30 388896 388978 C 82 97.56 1071 reject_low 6 ALIGNMENT 0 YS2-3b04.p1k chr15 116 639 980786 980785 F 524 0.00 1071 reject_low 9 ALIGNMENT 81 YS2-3b04.p1k chr14 30 121 568136 568229 F 92 96.74 1071 reject_low 1 ALIGNMENT 0 YS2-3b04.p1k chr13 639 116 196065 196064 C 524 0.00 1071 reject_low 4 ALIGNMENT 75 YS2-3b04.p1k chr14 30 111 547115 547197 F 82 97.56 1071 reject_low 7 ALIGNMENT 62 YS2-3b04.p1k chr15 30 115 980698 980786 F 86 91.86 1071 reject_low 9 ALIGNMENT 0 YS2-3b04.p1k chr08 639 112 388897 388896 C 528 0.00 1071 reject_low 6 ALIGNMENT 0 YS2-3b04.p1k chr01 112 639 139256 139255 F 528 0.00 1071 reject_low 5 ALIGNMENT 79 YS2-3b04.p1k chr13 115 30 196064 196150 C 86 97.67 1071 reject_low 4 ALIGNMENT 78 YS2-3b04.p1k chr06 30 120 101390 101481 F 91 95.60 1071 reject_low 3 ALIGNMENT 828 YS2-3b04.q1k chr15 1037 29 469580 470589 C 1009 95.34 1366 accept 0 ALIGNMENT 0 YS2-3b04.p1k chr14 122 639 568229 568228 F 518 0.00 1071 reject_low 1 ALIGNMENT 0 YS2-3b04.p1k chr12 121 639 92657 92656 F 519 0.00 1071 reject_low 2 ALIGNMENT 879 YS2-3b05.q1k chr16 1169 25 641821 642967 C 1145 93.19 1317 accept 0 ALIGNMENT 915 YS2-3b05.p1k chr16 47 1165 638721 639829 F 1119 95.26 1184 accept 0 ALIGNMENT 247 YS2-3b07.q1k vc_7 303 53 4922 5172 C 251 99.60 1043|0,1 reject_vc 7 ALIGNMENT 164 YS2-3b07.p1k chr08 215 37 559764 559942 C 179 98.32 234 ambiguous_tel 25 ALIGNMENT 0 YS2-3b07.q1k vc_4 62 237 1548 1547 F 176 0.00 1043 reject_vc 6 ALIGNMENT 0 YS2-3b07.p1k chr12 234 216 1068952 1068951 C 19 0.00 234 ambiguous_tel 13 ALIGNMENT 0 YS2-3b07.q1k vc_7 53 54 5172 6360 C 0 0.00 1043 reject_vc 7 ALIGNMENT 0 YS2-3b07.p1k chr12 216 234 2866 2865 F 19 0.00 234 ambiguous_tel 11 ALIGNMENT 0 YS2-3b07.p1k chr05 216 234 2713 2712 F 19 0.00 234 ambiguous_tel 26 ALIGNMENT 0 YS2-3b07.p1k chr07 234 216 1088320 1088319 C 19 0.00 234 ambiguous_tel 10 ALIGNMENT 171 YS2-3b07.p1k chr12 37 215 8224 8401 F 179 99.44 234 ambiguous_tel 12 ALIGNMENT 159 YS2-3b07.p1k chr05 37 215 2536 2713 F 179 97.21 234 ambiguous_tel 26 ALIGNMENT 0 YS2-3b07.p1k chr16 216 234 2558 2557 F 19 0.00 234 ambiguous_tel 18 ALIGNMENT 65 YS2-3b07.q1k vc_4 304 238 46 112 C 67 100.00 1043 reject_low 27 ALIGNMENT 171 YS2-3b07.p1k chr14 37 215 2472 2649 F 179 99.44 234 ambiguous_tel 16 ALIGNMENT 164 YS2-3b07.p1k chr02 37 215 2889 3067 F 179 98.32 234 ambiguous_tel 24 ALIGNMENT 302 YS2-3b07.q1k vc_3 1 303 2689 2991 F 303 100.00 1043 reject_vc 5 ALIGNMENT 0 YS2-3b07.p1k chr14 216 234 2649 2648 F 19 0.00 234 ambiguous_tel 16 ALIGNMENT 0 YS2-3b07.p1k chr09 216 234 3037 3036 F 19 0.00 234 ambiguous_tel 22 ALIGNMENT 0 YS2-3b07.q1k vc_4 237 62 113 112 C 176 0.00 1043 reject_low 27 ALIGNMENT 171 YS2-3b07.p1k chr05 215 37 574242 574419 C 179 99.44 234 ambiguous_tel 9 ALIGNMENT 0 YS2-3b07.q1k vc_4 237 62 6340 6339 C 176 0.00 1043 reject_low 28 ALIGNMENT 171 YS2-3b07.p1k chr16 37 215 2381 2558 F 179 99.44 234 ambiguous_tel 18 ALIGNMENT 111 YS2-3b07.q1k vc_7 422 305 4583 4699 C 118 99.15 1043 reject_vc 7 ALIGNMENT 0 YS2-3b07.p1k chr10 216 234 3020 3019 F 19 0.00 234 ambiguous_tel 23 ALIGNMENT 171 YS2-3b07.p1k chr12 215 37 1068951 1069128 C 179 99.44 234 ambiguous_tel 13 ALIGNMENT 0 YS2-3b07.q1k vc_4 305 307 1615 1878 F 3 0.00 1043 reject_vc 6 ALIGNMENT 171 YS2-3b07.p1k chr12 215 37 1075614 1075791 C 179 99.44 234 ambiguous_tel 14 ALIGNMENT 171 YS2-3b07.p1k chr12 37 215 2689 2866 F 179 99.44 234 ambiguous_tel 11 ALIGNMENT 0 YS2-3b07.p1k chr15 234 216 1088579 1088578 C 19 0.00 234 ambiguous_tel 17 ALIGNMENT 302 YS2-3b07.q1k vc_2 1 303 2322 2624 F 303 100.00 1043 reject_vc 4 ALIGNMENT 0 YS2-3b07.p1k chr06 216 234 1903 1902 F 19 0.00 234 ambiguous_tel 20 ALIGNMENT 65 YS2-3b07.q1k vc_4 238 304 1548 1614 F 67 100.00 1043 reject_vc 6 ALIGNMENT 65 YS2-3b07.q1k vc_4 304 238 6273 6339 C 67 100.00 1043 reject_low 28 ALIGNMENT 493 YS2-3b07.q1k vc_5 1 698 2556 3237 F 698 92.12 1043 reject_vc 0 ALIGNMENT 0 YS2-3b07.p1k chr05 234 216 574243 574242 C 19 0.00 234 ambiguous_tel 9 ALIGNMENT 409 YS2-3b07.q1k vc_4 422 1 5232 5654 C 422 99.29 1043 reject_vc 2 ALIGNMENT 168 YS2-3b07.p1k chr06 37 215 1726 1903 F 179 98.88 234 ambiguous_tel 20 ALIGNMENT 302 YS2-3b07.q1k vc_1 1 303 2689 2991 F 303 100.00 1043 reject_vc 3 ALIGNMENT 0 YS2-3b07.q1k vc_7 304 304 4700 4921 C 1 0.00 1043 reject_vc 7 ALIGNMENT 0 YS2-3b07.p1k chr12 216 234 8401 8400 F 19 0.00 234 ambiguous_tel 12 ALIGNMENT 165 YS2-3b07.p1k chr09 37 215 2860 3037 F 179 98.32 234 ambiguous_tel 22 ALIGNMENT 171 YS2-3b07.p1k chr13 37 215 2565 2742 F 179 99.44 234 ambiguous_tel 15 ALIGNMENT 181 YS2-3b07.q1k vc_4 308 697 1879 2252 F 390 85.90 1043 reject_vc 6 ALIGNMENT 0 YS2-3b07.p1k chr04 234 216 1529414 1529413 C 19 0.00 234 ambiguous_tel 8 ALIGNMENT 0 YS2-3b07.p1k chr16 234 216 945312 945311 C 19 0.00 234 ambiguous_tel 19 ALIGNMENT 171 YS2-3b07.p1k chr07 215 37 1088319 1088496 C 179 99.44 234 ambiguous_tel 10 ALIGNMENT 0 YS2-3b07.p1k chr08 216 234 2598 2597 F 19 0.00 234 ambiguous_tel 21 ALIGNMENT 0 YS2-3b07.p1k chr12 234 216 1075615 1075614 C 19 0.00 234 ambiguous_tel 14 ALIGNMENT 0 YS2-3b07.p1k chr08 234 216 559765 559764 C 19 0.00 234 ambiguous_tel 25 ALIGNMENT 171 YS2-3b07.p1k chr04 215 37 1529413 1529590 C 179 99.44 234 ambiguous_tel 8 ALIGNMENT 165 YS2-3b07.p1k chr10 37 215 2843 3020 F 179 98.32 234 ambiguous_tel 23 ALIGNMENT 171 YS2-3b07.p1k chr15 215 37 1088578 1088755 C 179 99.44 234 ambiguous_tel 17 ALIGNMENT 491 YS2-3b07.q1k vc_7 696 1 1890 2569 C 696 92.10 1043 reject_vc 1 ALIGNMENT 171 YS2-3b07.p1k chr16 215 37 945311 945488 C 179 99.44 234 ambiguous_tel 19 ALIGNMENT 51 YS2-3b07.q1k vc_7 54 3 6360 6411 C 52 100.00 1043|1,0 reject_vc 7 ALIGNMENT 0 YS2-3b07.p1k chr13 216 234 2742 2741 F 19 0.00 234 ambiguous_tel 15 ALIGNMENT 0 YS2-3b07.p1k chr02 216 234 3067 3066 F 19 0.00 234 ambiguous_tel 24 ALIGNMENT 168 YS2-3b07.p1k chr08 37 215 2421 2598 F 179 98.88 234 ambiguous_tel 21 ALIGNMENT 85 YS2-3b08.q1k vc_7 309 54 4926 5172 C 256 80.08 759|0,1 reject_vc 7 ALIGNMENT 133 YS2-3b08.q1k vc_4 333 1 5331 5654 C 333 82.28 759 reject_vc 2 ALIGNMENT 133 YS2-3b08.q1k vc_2 1 309 2322 2620 F 309 83.17 759 reject_vc 4 ALIGNMENT 133 YS2-3b08.q1k vc_3 1 309 2689 2987 F 309 83.17 759 reject_vc 5 ALIGNMENT 392 YS2-3b08.p1k chr01 436 31 86487 86892 C 406 99.51 455 accept 0 ALIGNMENT 0 YS2-3b08.p1k chr01 455 437 86488 86487 C 19 0.00 455 accept 0 ALIGNMENT 140 YS2-3b08.q1k vc_5 1 333 2556 2877 F 333 82.88 759 reject_vc 1 ALIGNMENT 0 YS2-3b08.q1k vc_7 54 55 5172 6360 C 0 0.00 759 reject_vc 7 ALIGNMENT 44 YS2-3b08.q1k vc_7 55 3 6360 6411 C 53 96.23 759|1,0 reject_vc 7 ALIGNMENT 130 YS2-3b08.q1k vc_7 266 1 2313 2569 C 266 85.34 759 reject_vc 6 ALIGNMENT 133 YS2-3b08.q1k vc_1 1 309 2689 2987 F 309 83.17 759 reject_vc 3 ALIGNMENT 557 YS2-3b09.p1k chrm 714 29 37512 38197 C 686 99.71 733 accept_chi 1 ALIGNMENT 0 YS2-3b09.p1k chrm 733 715 37513 37512 C 19 0.00 733 accept_chi 1 ALIGNMENT 0 YS2-3b09.p1k chrm 62 647 37539 37538 F 586 0.00 733 reject_low 2 ALIGNMENT 20 YS2-3b09.p1k chrm 648 687 37539 37578 F 40 100.00 733 reject_low 2 ALIGNMENT 542 YS2-3b09.q1k chrm 30 716 37512 38197 F 687 98.84 1404 accept_chi 0 ALIGNMENT 0 YS2-3b09.p1k chrm 688 733 37578 37577 F 46 0.00 733 reject_low 2 ALIGNMENT 950 YS2-3b10.p1k chr14 1188 41 594594 595744 C 1148 95.73 1191 accept 0 ALIGNMENT 816 YS2-3b10.q1k chr14 29 1110 594240 595329 F 1082 93.35 1303 accept 0 ALIGNMENT 797 YS2-3b11.q1k chr12 1038 32 198470 199466 C 1007 94.44 1397 accept 0 ALIGNMENT 983 YS2-3b11.p1k chr12 35 1153 195005 196123 F 1119 96.87 1157 accept 0 ALIGNMENT 397 YS2-3b12.p1k chr11 459 36 134209 134632 C 424 99.29 477 accept 0 ALIGNMENT 0 YS2-3b12.p1k chr11 477 460 134210 134209 C 18 0.00 477 accept 0 ALIGNMENT 301 YS2-3b13.q1k vc_7 476 1 2086 2569 C 476 89.08 658 reject_vc 2 ALIGNMENT 47 YS2-3b13.q1k vc_7 55 3 6360 6411 C 53 98.11 658|1,0 reject_vc 7 ALIGNMENT 0 YS2-3b13.q1k vc_7 54 55 5172 6360 C 0 0.00 658 reject_vc 7 ALIGNMENT 377 YS2-3b13.p1k chr04 450 35 317737 318154 C 416 98.56 469 accept 0 ALIGNMENT 260 YS2-3b13.q1k vc_4 374 1 5273 5654 C 374 91.18 658 reject_vc 3 ALIGNMENT 242 YS2-3b13.q1k vc_3 1 299 2689 2991 F 299 94.65 658 reject_vc 6 ALIGNMENT 0 YS2-3b13.q1k vc_4 62 303 1879 1878 F 242 0.00 658 reject_vc 8 ALIGNMENT 242 YS2-3b13.q1k vc_1 1 299 2689 2991 F 299 94.65 658 reject_vc 4 ALIGNMENT 301 YS2-3b13.q1k vc_5 1 476 2556 3039 F 476 88.87 658 reject_vc 1 ALIGNMENT 191 YS2-3b13.q1k vc_7 299 54 4922 5172 C 246 93.50 658|0,1 reject_vc 7 ALIGNMENT 54 YS2-3b13.q1k vc_4 304 476 1879 2055 F 173 78.61 658 reject_vc 8 ALIGNMENT 0 YS2-3b13.p1k chr04 469 451 317738 317737 C 19 0.00 469 accept 0 ALIGNMENT 242 YS2-3b13.q1k vc_2 1 299 2322 2624 F 299 94.65 658 reject_vc 5 ALIGNMENT 0 YS2-3b14.p1k vc_1 693 62 2473 2472 C 632 0.00 1185 reject_low 9 ALIGNMENT 282 YS2-3b14.p1k vc_5 1090 694 4643 5025 C 397 92.95 1185 reject_low 5 ALIGNMENT 0 YS2-3b14.p1k vc_3 693 62 2473 2472 C 632 0.00 1185 reject_low 10 ALIGNMENT 282 YS2-3b14.p1k vc_1 1090 694 1723 2105 C 397 92.95 1185 reject_low 2 ALIGNMENT 0 YS2-3b14.p1k vc_7 62 693 13562 13561 F 632 0.00 1185 reject_low 7 ALIGNMENT 0 YS2-3b14.p1k vc_2 693 62 2106 2105 C 632 0.00 1185 reject_low 3 ALIGNMENT 630 YS2-3b14.p1k chr05 676 30 228701 229347 C 647 99.69 1185 accept_chi 0 ALIGNMENT 482 YS2-3b14.q1k chr05 64 694 228707 229324 F 631 93.82 1526 accept_chi 1 ALIGNMENT 0 YS2-3b14.p1k vc_1 782 725 2442 2441 C 58 0.00 1185 reject_low 9 ALIGNMENT 26 YS2-3b14.p1k vc_3 724 694 2441 2472 C 31 96.77 1185 reject_low 10 ALIGNMENT 0 YS2-3b14.p1k vc_4 62 693 5871 5870 F 632 0.00 1185 reject_low 8 ALIGNMENT 282 YS2-3b14.p1k vc_2 1090 694 1723 2105 C 397 92.95 1185 reject_low 3 ALIGNMENT 0 YS2-3b14.p1k vc_7 62 693 100 99 F 632 0.00 1185 reject_low 6 ALIGNMENT 282 YS2-3b14.p1k vc_7 694 1090 13562 13944 F 397 92.95 1185 reject_low 7 ALIGNMENT 26 YS2-3b14.p1k vc_1 724 694 2441 2472 C 31 96.77 1185 reject_low 9 ALIGNMENT 0 YS2-3b14.p1k vc_5 693 62 5026 5025 C 632 0.00 1185 reject_low 5 ALIGNMENT 282 YS2-3b14.p1k vc_3 1090 694 1723 2105 C 397 92.95 1185 reject_low 4 ALIGNMENT 0 YS2-3b14.p1k vc_3 782 725 2442 2441 C 58 0.00 1185 reject_low 10 ALIGNMENT 282 YS2-3b14.p1k vc_7 694 1090 100 482 F 397 92.95 1185 reject_low 6 ALIGNMENT 0 YS2-3b14.p1k vc_3 693 62 2106 2105 C 632 0.00 1185 reject_low 4 ALIGNMENT 0 YS2-3b14.p1k vc_1 693 62 2106 2105 C 632 0.00 1185 reject_low 2 ALIGNMENT 0 YS2-3b14.p1k chr05 782 677 228702 228701 C 106 0.00 1185 accept_chi 0 ALIGNMENT 281 YS2-3b14.p1k vc_4 694 1053 5871 6222 F 360 94.44 1185 reject_low 8 ALIGNMENT 514 YS2-3b15.q1k chr14 36 717 173333 174005 F 682 93.26 1395 accept 0 ALIGNMENT 965 YS2-3b15.p1k chr14 1151 33 177417 178538 C 1119 97.77 1151 accept 0 ALIGNMENT 0 YS2-3b16.q1k chr14 639 62 254950 254949 C 578 0.00 1370 reject_low 4 ALIGNMENT 44 YS2-3b16.p1k chr10 662 793 382385 382516 F 132 78.79 1150 reject_low 6 ALIGNMENT 52 YS2-3b16.p1k chr10 367 83 520737 521012 C 285 74.74 1150 reject_low 7 ALIGNMENT 53 YS2-3b16.q1k chr14 744 640 254845 254949 C 105 84.76 1370 reject_low 4 ALIGNMENT 0 YS2-3b16.p1k chr10 794 810 382516 382515 F 17 0.00 1150 reject_low 6 ALIGNMENT 54 YS2-3b16.p1k chr10 74 355 381804 382079 F 282 74.82 1150 reject_low 6 ALIGNMENT 0 YS2-3b16.p1k chr10 810 795 520303 520302 C 16 0.00 1150 reject_low 7 ALIGNMENT 33 YS2-3b16.p1k chr10 794 744 520302 520352 C 51 88.24 1150 reject_low 7 ALIGNMENT 904 YS2-3b16.p1k chr04 31 1149 44451 45576 F 1119 94.55 1150 reject_low 1 ALIGNMENT 0 YS2-3b16.q1k chr14 687 62 254998 254997 C 626 0.00 1370 reject_low 5 ALIGNMENT 44 YS2-3b16.q1k chr14 753 688 254932 254997 C 66 90.91 1370 reject_low 5 ALIGNMENT 949 YS2-3b16.p1k chr14 31 1149 252445 253570 F 1119 95.80 1150 accept 0 ALIGNMENT 0 YS2-3b16.p1k chr10 82 62 521013 521012 C 21 0.00 1150 reject_low 7 ALIGNMENT 226 YS2-3b16.p1k chr12 799 74 96349 97067 C 726 78.24 1150 reject_low 2 ALIGNMENT 20 YS2-3b16.p1k chr05 243 276 95290 95323 F 34 91.18 1150 reject_low 8 ALIGNMENT 36 YS2-3b16.p1k chr05 69 206 95125 95262 F 138 75.36 1150 reject_low 8 ALIGNMENT 220 YS2-3b16.p1k chr01 799 74 140298 141016 C 726 77.96 1150 reject_low 3 ALIGNMENT 0 YS2-3b16.p1k chr10 356 661 382080 382384 F 306 0.00 1150 reject_low 6 ALIGNMENT 0 YS2-3b16.p1k chr10 743 368 520353 520736 C 376 0.00 1150 reject_low 7 ALIGNMENT 894 YS2-3b16.q1k chr14 1160 33 254487 255603 C 1128 94.33 1370 accept 0 ALIGNMENT 0 YS2-3b16.p1k chr05 277 810 95323 95322 F 534 0.00 1150 reject_low 8 ALIGNMENT 0 YS2-3b16.p1k chr05 207 242 95263 95289 F 36 0.00 1150 reject_low 8 ALIGNMENT 819 YS2-3b17.q1k chr14 1053 27 667965 668989 C 1027 94.55 1376 accept 0 ALIGNMENT 934 YS2-3b17.p1k chr14 24 1113 663148 664243 F 1090 95.14 1133 accept 0 ALIGNMENT 539 YS2-3b18.p1k chr05 28 582 422493 423047 F 555 99.28 600 accept 0 ALIGNMENT 0 YS2-3b18.p1k chr05 583 600 423047 423046 F 18 0.00 600 accept 0 ALIGNMENT 0 YS2-3b19.q1k chr13 114 62 184482 184481 C 53 0.00 1299 reject_low 49 ALIGNMENT 64 YS2-3b19.p1k chr16 31 179 850813 850962 F 149 83.22 1132 reject_low 44 ALIGNMENT 0 YS2-3b19.q1k chr15 94 62 123628 123627 C 33 0.00 1299 reject_low 34 ALIGNMENT 131 YS2-3b19.p1k chr16 31 179 804826 804974 F 149 97.99 1132 reject_low 25 ALIGNMENT 0 YS2-3b19.p1k chr16 180 872 804974 804973 F 693 0.00 1132 reject_low 25 ALIGNMENT 97 YS2-3b19.q1k chr14 95 236 102192 102332 F 142 91.55 1299 reject_low 33 ALIGNMENT 137 YS2-3b19.p1k chr02 179 31 9093 9241 C 149 99.33 1132 reject_low 7 ALIGNMENT 0 YS2-3b19.q1k chr05 94 62 176856 176855 C 33 0.00 1299 reject_low 46 ALIGNMENT 0 YS2-3b19.p1k chr16 872 184 844405 844404 C 689 0.00 1132 reject_low 40 ALIGNMENT 0 YS2-3b19.p1k chr02 872 180 9094 9093 C 693 0.00 1132 reject_low 7 ALIGNMENT 0 YS2-3b19.q1k chr14 594 235 519360 519359 C 360 0.00 1299 reject_low 45 ALIGNMENT 98 YS2-3b19.q1k chr14 94 236 96609 96750 F 143 91.61 1299 reject_low 28 ALIGNMENT 25 YS2-3b19.p1k chr02 107 31 8922 8998 C 77 81.82 1132 reject_low 65 ALIGNMENT 131 YS2-3b19.p1k chr01 31 179 166015 166163 F 149 97.99 1132 reject_low 24 ALIGNMENT 0 YS2-3b19.p1k chr16 180 872 810558 810557 F 693 0.00 1132 reject_low 26 ALIGNMENT 0 YS2-3b19.q1k chr02 94 62 226956 226955 C 33 0.00 1299 reject_low 36 ALIGNMENT 0 YS2-3b19.p1k chr06 872 180 137909 137908 C 693 0.00 1132 reject_low 11 ALIGNMENT 0 YS2-3b19.q1k chr01 594 216 183349 183348 C 379 0.00 1299 reject_low 58 ALIGNMENT 0 YS2-3b19.p1k chr14 180 872 726946 726945 F 693 0.00 1132 reject_low 20 ALIGNMENT 97 YS2-3b19.q1k chr16 236 95 56648 56788 C 142 91.55 1299 reject_low 35 ALIGNMENT 0 YS2-3b19.p1k chr03 180 872 168928 168927 F 693 0.00 1132 reject_low 8 ALIGNMENT 0 YS2-3b19.p1k chr14 872 180 524731 524730 C 693 0.00 1132 reject_low 19 ALIGNMENT 0 YS2-3b19.q1k chr12 594 235 651022 651021 C 360 0.00 1299 reject_low 53 ALIGNMENT 0 YS2-3b19.p1k chr01 180 872 166163 166162 F 693 0.00 1132 reject_low 24 ALIGNMENT 0 YS2-3b19.q1k chr13 594 237 189944 189943 C 358 0.00 1299 reject_low 50 ALIGNMENT 137 YS2-3b19.p1k chr03 31 179 168780 168928 F 149 99.33 1132 reject_low 8 ALIGNMENT 0 YS2-3b19.p1k chr03 505 180 84073 84067 C 326 0.00 1132 reject_bad_break 0 ALIGNMENT 0 YS2-3b19.q1k chr02 594 237 265353 265352 C 358 0.00 1299 reject_low 54 ALIGNMENT 89 YS2-3b19.q1k chr12 94 217 818072 818194 F 124 92.74 1299 reject_low 39 ALIGNMENT 82 YS2-3b19.q1k chr13 236 115 184361 184481 C 122 90.98 1299 reject_low 49 ALIGNMENT 0 YS2-3b19.p1k chr03 872 462 149537 149536 C 411 0.00 1132 reject_low 66 ALIGNMENT 0 YS2-3b19.p1k chr09 872 180 246218 246217 C 693 0.00 1132 reject_low 13 ALIGNMENT 0 YS2-3b19.q1k chr16 114 62 844726 844725 C 53 0.00 1299 reject_low 51 ALIGNMENT 137 YS2-3b19.p1k chr15 179 31 970282 970430 C 149 99.33 1132 reject_low 22 ALIGNMENT 0 YS2-3b19.q1k chr16 594 237 844606 844605 C 358 0.00 1299 reject_low 51 ALIGNMENT 0 YS2-3b19.q1k chr13 594 237 202116 202115 C 358 0.00 1299 reject_low 60 ALIGNMENT 0 YS2-3b19.p1k chr03 180 872 143077 143076 F 693 0.00 1132 reject_low 59 ALIGNMENT 0 YS2-3b19.q1k chr12 62 94 475975 475974 F 33 0.00 1299 reject_low 32 ALIGNMENT 64 YS2-3b19.p1k chr16 183 31 844404 844557 C 153 83.01 1132 reject_low 40 ALIGNMENT 0 YS2-3b19.q1k chr02 62 114 258685 258684 F 53 0.00 1299 reject_low 63 ALIGNMENT 0 YS2-3b19.q1k chr01 237 594 160379 160378 F 358 0.00 1299 reject_low 29 ALIGNMENT 0 YS2-3b19.p1k chr16 180 872 850962 850961 F 693 0.00 1132 reject_low 44 ALIGNMENT 0 YS2-3b19.q1k chr13 594 237 196529 196528 C 358 0.00 1299 reject_low 38 ALIGNMENT 0 YS2-3b19.q1k chr13 114 62 190064 190063 C 53 0.00 1299 reject_low 50 ALIGNMENT 137 YS2-3b19.p1k chr14 179 31 519164 519312 C 149 99.33 1132 reject_low 18 ALIGNMENT 0 YS2-3b19.q1k chr14 94 62 519498 519497 C 33 0.00 1299 reject_low 45 ALIGNMENT 0 YS2-3b19.q1k chr02 594 237 259768 259767 C 358 0.00 1299 reject_low 47 ALIGNMENT 0 YS2-3b19.q1k chr13 594 237 184362 184361 C 358 0.00 1299 reject_low 49 ALIGNMENT 0 YS2-3b19.p1k chr03 205 62 151828 151827 C 144 0.00 1132 reject_low 2 ALIGNMENT 37 YS2-3b19.p1k chr06 112 31 137718 137799 C 82 84.15 1132 reject_low 64 ALIGNMENT 0 YS2-3b19.q1k chr02 594 237 226816 226815 C 358 0.00 1299 reject_low 36 ALIGNMENT 64 YS2-3b19.p1k chr16 179 31 849999 850148 C 149 83.22 1132 reject_low 43 ALIGNMENT 0 YS2-3b19.q1k chr02 237 594 258805 258804 F 358 0.00 1299 reject_low 63 ALIGNMENT 0 YS2-3b19.q1k chr03 83 594 82699 82698 F 512 0.00 1299 reject_low 1 ALIGNMENT 529 YS2-3b19.p1k chr03 1132 506 83444 84072 C 627 95.37 1132 reject_bad_break 0 ALIGNMENT 0 YS2-3b19.p1k chr03 181 872 124463 124462 F 692 0.00 1132 reject_low 57 ALIGNMENT 0 YS2-3b19.p1k chr03 872 147 149514 149513 C 726 0.00 1132 reject_low 61 ALIGNMENT 0 YS2-3b19.p1k chr06 872 180 143536 143535 C 693 0.00 1132 reject_low 12 ALIGNMENT 0 YS2-3b19.p1k chr10 180 872 541341 541340 F 693 0.00 1132 reject_low 15 ALIGNMENT 0 YS2-3b19.q1k chr05 594 237 138414 138413 C 358 0.00 1299 reject_low 3 ALIGNMENT 137 YS2-3b19.p1k chr12 31 179 976437 976585 F 149 99.33 1132 reject_low 17 ALIGNMENT 91 YS2-3b19.q1k chr13 236 95 196528 196668 C 142 90.14 1299 reject_low 38 ALIGNMENT 0 YS2-3b19.p1k chr10 872 180 538018 538017 C 693 0.00 1132 reject_low 14 ALIGNMENT 137 YS2-3b19.p1k chr09 179 31 246217 246365 C 149 99.33 1132 reject_low 13 ALIGNMENT 0 YS2-3b19.p1k chr12 180 872 976585 976584 F 693 0.00 1132 reject_low 17 ALIGNMENT 137 YS2-3b19.p1k chr10 31 179 541193 541341 F 149 99.33 1132 reject_low 15 ALIGNMENT 59 YS2-3b19.p1k chr03 31 180 124313 124463 F 150 82.00 1132 reject_low 57 ALIGNMENT 0 YS2-3b19.q1k chr12 62 93 818072 818071 F 32 0.00 1299 reject_low 39 ALIGNMENT 0 YS2-3b19.q1k chr05 237 594 498219 498218 F 358 0.00 1299 reject_low 55 ALIGNMENT 0 YS2-3b19.q1k chr12 218 594 818194 818193 F 377 0.00 1299 reject_low 39 ALIGNMENT 0 YS2-3b19.p1k chr04 872 180 871817 871816 C 693 0.00 1132 reject_low 9 ALIGNMENT 85 YS2-3b19.q1k chr09 96 236 197137 197278 F 141 89.36 1299 reject_low 41 ALIGNMENT 0 YS2-3b19.q1k chr14 62 93 96609 96608 F 32 0.00 1299 reject_low 28 ALIGNMENT 91 YS2-3b19.q1k chr07 236 95 931882 932022 C 142 90.14 1299 reject_low 37 ALIGNMENT 97 YS2-3b19.q1k chr01 95 236 160239 160379 F 142 91.55 1299 reject_low 29 ALIGNMENT 0 YS2-3b19.q1k chr14 594 235 524926 524925 C 360 0.00 1299 reject_low 42 ALIGNMENT 0 YS2-3b19.q1k chr13 128 62 202222 202221 C 67 0.00 1299 reject_low 60 ALIGNMENT 0 YS2-3b19.q1k chr08 62 114 549326 549325 F 53 0.00 1299 reject_low 56 ALIGNMENT 80 YS2-3b19.q1k chr14 234 95 519359 519497 C 140 87.86 1299 reject_low 45 ALIGNMENT 0 YS2-3b19.p1k chr06 872 113 137719 137718 C 760 0.00 1132 reject_low 64 ALIGNMENT 58 YS2-3b19.p1k chr03 31 179 142928 143077 F 149 81.88 1132 reject_low 59 ALIGNMENT 81 YS2-3b19.q1k chr14 234 94 524925 525064 C 141 87.94 1299 reject_low 42 ALIGNMENT 97 YS2-3b19.q1k chr12 95 236 475975 476115 F 142 91.55 1299 reject_low 32 ALIGNMENT 0 YS2-3b19.q1k chr05 594 244 176710 176709 C 351 0.00 1299 reject_low 46 ALIGNMENT 0 YS2-3b19.p1k chr03 872 462 151574 151573 C 411 0.00 1132 reject_low 2 ALIGNMENT 24 YS2-3b19.p1k chr03 461 360 84124 84226 C 102 77.45 1132 reject_low 1 ALIGNMENT 0 YS2-3b19.q1k chr14 62 94 102192 102191 F 33 0.00 1299 reject_low 33 ALIGNMENT 71 YS2-3b19.q1k chr13 236 129 202115 202221 C 108 90.74 1299 reject_low 60 ALIGNMENT 82 YS2-3b19.q1k chr16 236 115 844605 844725 C 122 90.98 1299 reject_low 51 ALIGNMENT 0 YS2-3b19.q1k chr02 594 237 221232 221231 C 358 0.00 1299 reject_low 52 ALIGNMENT 0 YS2-3b19.q1k chr03 594 237 82896 82895 C 358 0.00 1299 reject_low 27 ALIGNMENT 0 YS2-3b19.p1k chr15 872 180 664815 664814 C 693 0.00 1132 reject_low 21 ALIGNMENT 0 YS2-3b19.p1k chr12 872 180 941190 941189 C 693 0.00 1132 reject_low 16 ALIGNMENT 139 YS2-3b19.p1k chr12 31 181 731854 732004 F 151 99.34 1132 reject_low 6 ALIGNMENT 0 YS2-3b19.q1k chr12 94 62 651160 651159 C 33 0.00 1299 reject_low 53 ALIGNMENT 0 YS2-3b19.q1k chr15 594 237 123488 123487 C 358 0.00 1299 reject_low 34 ALIGNMENT 74 YS2-3b19.q1k chr01 215 94 183348 183469 C 122 89.34 1299 reject_low 58 ALIGNMENT 131 YS2-3b19.p1k chr01 31 179 160427 160575 F 149 97.99 1132 reject_low 23 ALIGNMENT 59 YS2-3b19.q1k chr05 243 95 176709 176855 C 149 82.55 1299 reject_low 46 ALIGNMENT 0 YS2-3b19.p1k chr03 202 180 149790 151517 C 23 0.00 1132 reject_low 66 ALIGNMENT 45 YS2-3b19.p1k chr03 146 31 149513 149628 C 116 81.90 1132 reject_low 61 ALIGNMENT 79 YS2-3b19.q1k chr02 236 115 265352 265472 C 122 90.16 1299 reject_low 54 ALIGNMENT 29 YS2-3b19.p1k chr03 461 203 149536 149789 C 259 74.90 1132 reject_low 66 ALIGNMENT 0 YS2-3b19.q1k chr14 93 62 525065 525064 C 32 0.00 1299 reject_low 42 ALIGNMENT 78 YS2-3b19.q1k chr02 236 95 221231 221373 C 142 87.32 1299 reject_low 52 ALIGNMENT 82 YS2-3b19.q1k chr02 236 115 259767 259887 C 122 90.98 1299 reject_low 47 ALIGNMENT 0 YS2-3b19.p1k chr02 872 108 8923 8922 C 765 0.00 1132 reject_low 65 ALIGNMENT 97 YS2-3b19.q1k chr01 95 236 165827 165967 F 142 91.55 1299 reject_low 30 ALIGNMENT 77 YS2-3b19.q1k chr12 234 95 651021 651159 C 140 87.14 1299 reject_low 53 ALIGNMENT 0 YS2-3b19.p1k chr10 147 872 537948 537947 F 726 0.00 1132 reject_low 62 ALIGNMENT 137 YS2-3b19.p1k chr14 31 179 726798 726946 F 149 99.33 1132 reject_low 20 ALIGNMENT 0 YS2-3b19.q1k chr07 94 62 932023 932022 C 33 0.00 1299 reject_low 37 ALIGNMENT 46 YS2-3b19.q1k chr02 115 236 258685 258805 F 122 81.15 1299 reject_low 63 ALIGNMENT 0 YS2-3b19.p1k chr08 185 872 389517 389516 F 688 0.00 1132 reject_low 4 ALIGNMENT 79 YS2-3b19.q1k chr08 115 236 549326 549446 F 122 90.16 1299 reject_low 56 ALIGNMENT 0 YS2-3b19.q1k chr08 237 594 549446 549445 F 358 0.00 1299 reject_low 56 ALIGNMENT 0 YS2-3b19.q1k chr14 237 594 96750 96749 F 358 0.00 1299 reject_low 28 ALIGNMENT 0 YS2-3b19.q1k chr03 90 62 83040 83039 C 29 0.00 1299 reject_low 27 ALIGNMENT 40 YS2-3b19.p1k chr10 31 146 537834 537948 F 116 81.03 1132 reject_low 62 ALIGNMENT 0 YS2-3b19.q1k chr14 237 594 102332 102331 F 358 0.00 1299 reject_low 33 ALIGNMENT 0 YS2-3b19.q1k chr02 114 62 259888 259887 C 53 0.00 1299 reject_low 47 ALIGNMENT 0 YS2-3b19.p1k chr15 872 180 970283 970282 C 693 0.00 1132 reject_low 22 ALIGNMENT 0 YS2-3b19.p1k chr03 872 462 84125 84124 C 411 0.00 1132 reject_low 1 ALIGNMENT 97 YS2-3b19.q1k chr05 95 236 448980 449120 F 142 91.55 1299 reject_low 31 ALIGNMENT 0 YS2-3b19.p1k chr13 183 872 168684 168683 F 690 0.00 1132 reject_low 5 ALIGNMENT 0 YS2-3b19.q1k chr01 62 94 165827 165826 F 33 0.00 1299 reject_low 30 ALIGNMENT 137 YS2-3b19.p1k chr06 179 31 143535 143683 C 149 99.33 1132 reject_low 12 ALIGNMENT 78 YS2-3b19.q1k chr05 236 47 138413 138605 C 190 82.63 1299 reject_low 3 ALIGNMENT 0 YS2-3b19.p1k chr12 182 872 732004 732003 F 691 0.00 1132 reject_low 6 ALIGNMENT 0 YS2-3b19.q1k chr05 62 114 498099 498098 F 53 0.00 1299 reject_low 55 ALIGNMENT 82 YS2-3b19.q1k chr13 236 115 189943 190063 C 122 90.98 1299 reject_low 50 ALIGNMENT 137 YS2-3b19.p1k chr15 179 31 664814 664962 C 149 99.33 1132 reject_low 21 ALIGNMENT 137 YS2-3b19.p1k chr14 179 31 524730 524878 C 149 99.33 1132 reject_low 19 ALIGNMENT 0 YS2-3b19.q1k chr03 80 79 82697 83038 F 0 0.00 1299 reject_bad_break 0 ALIGNMENT 79 YS2-3b19.q1k chr05 115 236 498099 498219 F 122 90.16 1299 reject_low 55 ALIGNMENT 141 YS2-3b19.p1k chr08 31 184 389364 389517 F 154 99.35 1132 reject_low 4 ALIGNMENT 666 YS2-3b19.q1k chr03 77 919 83036 83872 F 843 94.54 1299|3,0 reject_bad_break 0 ALIGNMENT 0 YS2-3b19.q1k chr12 237 594 476115 476114 F 358 0.00 1299 reject_low 32 ALIGNMENT 0 YS2-3b19.q1k chr01 237 594 165967 165966 F 358 0.00 1299 reject_low 30 ALIGNMENT 82 YS2-3b19.q1k chr08 115 236 543630 543750 F 122 90.98 1299 reject_low 48 ALIGNMENT 30 YS2-3b19.p1k chr03 461 206 151573 151827 C 256 74.61 1132 reject_low 2 ALIGNMENT 0 YS2-3b19.q1k chr05 62 94 448980 448979 F 33 0.00 1299 reject_low 31 ALIGNMENT 91 YS2-3b19.q1k chr02 236 95 226815 226955 C 142 90.14 1299 reject_low 36 ALIGNMENT 0 YS2-3b19.q1k chr16 594 237 56649 56648 C 358 0.00 1299 reject_low 35 ALIGNMENT 59 YS2-3b19.p1k chr03 179 31 151518 151666 C 149 82.55 1132 reject_low 66 ALIGNMENT 0 YS2-3b19.q1k chr02 94 62 221374 221373 C 33 0.00 1299 reject_low 52 ALIGNMENT 0 YS2-3b19.q1k chr01 62 94 160239 160238 F 33 0.00 1299 reject_low 29 ALIGNMENT 137 YS2-3b19.p1k chr12 179 31 941189 941337 C 149 99.33 1132 reject_low 16 ALIGNMENT 69 YS2-3b19.q1k chr03 5 82 82622 82699 F 78 98.72 1299|0,3 reject_bad_break 0 reject_low 1 ALIGNMENT 0 YS2-3b19.p1k chr14 872 180 519165 519164 C 693 0.00 1132 reject_low 18 ALIGNMENT 0 YS2-3b19.q1k chr16 94 62 56789 56788 C 33 0.00 1299 reject_low 35 ALIGNMENT 139 YS2-3b19.p1k chr13 31 182 168533 168684 F 152 99.34 1132 reject_low 5 ALIGNMENT 137 YS2-3b19.p1k chr04 179 31 981165 981313 C 149 99.33 1132 reject_low 10 ALIGNMENT 137 YS2-3b19.p1k chr10 179 31 538017 538165 C 149 99.33 1132 reject_low 14 ALIGNMENT 0 YS2-3b19.q1k chr08 62 114 543630 543629 F 53 0.00 1299 reject_low 48 ALIGNMENT 137 YS2-3b19.p1k chr04 179 31 871816 871964 C 149 99.33 1132 reject_low 9 ALIGNMENT 0 YS2-3b19.p1k chr16 872 180 850000 849999 C 693 0.00 1132 reject_low 43 ALIGNMENT 0 YS2-3b19.p1k chr04 872 180 981166 981165 C 693 0.00 1132 reject_low 10 ALIGNMENT 134 YS2-3b19.p1k chr03 179 31 84068 84216 C 149 98.66 1132 reject_bad_break 0 ALIGNMENT 97 YS2-3b19.q1k chr15 236 95 123487 123627 C 142 91.55 1299 reject_low 34 ALIGNMENT 0 YS2-3b19.q1k chr07 594 237 931883 931882 C 358 0.00 1299 reject_low 37 ALIGNMENT 131 YS2-3b19.p1k chr16 31 179 810410 810558 F 149 97.99 1132 reject_low 26 ALIGNMENT 0 YS2-3b19.p1k chr01 180 872 160575 160574 F 693 0.00 1132 reject_low 23 ALIGNMENT 137 YS2-3b19.p1k chr06 179 31 137908 138056 C 149 99.33 1132 reject_low 11 ALIGNMENT 0 YS2-3b19.q1k chr09 237 594 197278 197277 F 358 0.00 1299 reject_low 41 ALIGNMENT 0 YS2-3b19.q1k chr05 237 594 449120 449119 F 358 0.00 1299 reject_low 31 ALIGNMENT 0 YS2-3b19.p1k chr03 359 62 84227 84226 C 298 0.00 1132 reject_low 1 ALIGNMENT 101 YS2-3b19.q1k chr03 236 91 82895 83039 C 146 91.78 1299 reject_low 27 ALIGNMENT 0 YS2-3b19.q1k chr09 62 95 197137 197136 F 34 0.00 1299 reject_low 41 ALIGNMENT 0 YS2-3b19.q1k chr08 237 594 543750 543749 F 358 0.00 1299 reject_low 48 ALIGNMENT 0 YS2-3b19.q1k chr13 94 62 196669 196668 C 33 0.00 1299 reject_low 38 ALIGNMENT 0 YS2-3b19.q1k chr02 114 62 265473 265472 C 53 0.00 1299 reject_low 54 ALIGNMENT 0 YS2-3b19.q1k chr01 93 62 183470 183469 C 32 0.00 1299 reject_low 58 ALIGNMENT 0 YS2-3b21.p1k chr13 385 402 495984 495983 F 18 0.00 402 accept 0 ALIGNMENT 238 YS2-3b21.q1k vc_5 1 454 2556 2991 F 454 87.00 706 reject_vc 1 ALIGNMENT 227 YS2-3b21.q1k vc_4 437 1 5233 5654 C 437 86.96 706 reject_vc 2 ALIGNMENT 232 YS2-3b21.q1k vc_7 394 1 2190 2569 C 394 88.83 706 reject_vc 3 ALIGNMENT 51 YS2-3b21.q1k vc_7 54 3 6360 6411 C 52 100.00 706|1,0 reject_vc 7 ALIGNMENT 345 YS2-3b21.p1k chr13 30 384 495630 495984 F 355 99.72 402 accept 0 ALIGNMENT 222 YS2-3b21.q1k vc_2 1 305 2322 2620 F 305 92.46 706 reject_vc 5 ALIGNMENT 222 YS2-3b21.q1k vc_3 1 305 2689 2987 F 305 92.46 706 reject_vc 6 ALIGNMENT 167 YS2-3b21.q1k vc_7 305 53 4926 5172 C 253 90.51 706|0,1 reject_vc 7 ALIGNMENT 0 YS2-3b21.q1k vc_7 53 54 5172 6360 C 0 0.00 706 reject_vc 7 ALIGNMENT 222 YS2-3b21.q1k vc_1 1 305 2689 2987 F 305 92.46 706 reject_vc 4 ALIGNMENT 345 YS2-3b22.p1k chr13 31 385 495630 495984 F 355 99.72 403 accept_chi 0 ALIGNMENT 0 YS2-3b22.p1k chr13 386 403 495984 495983 F 18 0.00 403 accept_chi 0 ALIGNMENT 256 YS2-3b22.q1k chr13 399 48 495629 495976 C 352 92.33 1425 accept_chi 1 ALIGNMENT 791 YS2-3b23.q1k chr07 959 33 945534 946446 C 927 96.98 1391 accept 0 ALIGNMENT 945 YS2-3b23.p1k chr07 32 1077 941891 942940 F 1046 97.32 1079 accept 0 ALIGNMENT 0 YS2-3c01.q1k vc_4 237 62 113 112 C 176 0.00 864 reject_low 8 ALIGNMENT 51 YS2-3c01.q1k vc_4 306 238 6273 6339 C 69 94.20 864 reject_low 9 ALIGNMENT 0 YS2-3c01.q1k vc_4 307 309 1615 1878 F 3 0.00 864 reject_low 7 ALIGNMENT 0 YS2-3c01.q1k vc_4 62 237 1548 1547 F 176 0.00 864 reject_low 7 ALIGNMENT 0 YS2-3c01.q1k vc_7 306 306 4700 4921 C 1 0.00 864 reject_low 6 ALIGNMENT 77 YS2-3c01.q1k vc_7 414 307 4592 4699 C 108 91.67 864 reject_low 6 ALIGNMENT 358 YS2-3c01.q1k vc_4 414 1 5241 5654 C 414 96.14 864 reject_low 2 ALIGNMENT 285 YS2-3c01.q1k vc_2 1 305 2322 2624 F 305 98.36 864 reject_low 4 ALIGNMENT 0 YS2-3c01.q1k vc_7 53 54 5172 6360 C 0 0.00 864 reject_low 6 ALIGNMENT 398 YS2-3c01.q1k vc_7 578 1 2003 2569 C 578 91.18 864 reject_vc 1 ALIGNMENT 107 YS2-3c01.q1k vc_4 310 578 1879 2138 F 269 82.53 864 reject_low 7 ALIGNMENT 51 YS2-3c01.q1k vc_4 306 238 46 112 C 69 94.20 864 reject_low 8 ALIGNMENT 51 YS2-3c01.q1k vc_7 54 3 6360 6411 C 52 100.00 864|1,0 reject_low 6 ALIGNMENT 230 YS2-3c01.q1k vc_7 305 53 4922 5172 C 253 97.63 864|0,1 reject_low 6 ALIGNMENT 285 YS2-3c01.q1k vc_3 1 305 2689 2991 F 305 98.36 864 reject_low 5 ALIGNMENT 398 YS2-3c01.q1k vc_5 1 578 2556 3122 F 578 91.00 864 reject_vc 0 ALIGNMENT 51 YS2-3c01.q1k vc_4 238 306 1548 1614 F 69 94.20 864 reject_low 7 ALIGNMENT 285 YS2-3c01.q1k vc_1 1 305 2689 2991 F 305 98.36 864 reject_low 3 ALIGNMENT 0 YS2-3c01.q1k vc_4 237 62 6340 6339 C 176 0.00 864 reject_low 9 ALIGNMENT 473 YS2-3c02.p1k chr11 27 521 425127 425620 F 495 99.60 1218 accept 0 ALIGNMENT 843 YS2-3c02.q1k chr11 1096 33 428518 429569 C 1064 94.55 1382 accept 0 ALIGNMENT 342 YS2-3c03.p1k chr13 389 31 467165 467523 C 359 100.00 406 accept 0 ALIGNMENT 0 YS2-3c03.p1k chr13 406 390 467166 467165 C 17 0.00 406 accept 0 ALIGNMENT 153 YS2-3c04.p1k chr02 29 186 280988 281145 F 158 100.00 205 accept 0 ALIGNMENT 0 YS2-3c04.p1k chr02 187 205 281145 281144 F 19 0.00 205 accept 0 ALIGNMENT 894 YS2-3c05.p1k chr16 1072 30 729298 730356 C 1043 96.26 1128 accept 0 ALIGNMENT 810 YS2-3c05.q1k chr16 31 1049 726416 727418 F 1019 95.49 1393 accept 0 ALIGNMENT 0 YS2-3c07.q1k chrm 603 409 80032 80031 C 195 0.00 1360 accept 0 ALIGNMENT 31 YS2-3c07.p1k chrm 787 754 77864 77897 C 34 97.06 1119 reject_low 2 ALIGNMENT 25 YS2-3c07.p1k chrm 753 725 77869 77897 C 29 96.55 1119 reject_low 3 ALIGNMENT 0 YS2-3c07.p1k chrm 817 754 77870 77869 C 64 0.00 1119 reject_low 3 ALIGNMENT 0 YS2-3c07.p1k chrm 817 788 77865 77864 C 30 0.00 1119 reject_low 2 ALIGNMENT 20 YS2-3c07.p1k chrm 737 768 70364 70395 F 32 87.50 1119|0,8 accept 0 reject_low 6 ALIGNMENT 218 YS2-3c07.q1k chrm 408 31 80031 80428 C 378 92.33 1360 accept 0 ALIGNMENT 0 YS2-3c07.p1k chrm 761 760 70388 80174 F 0 0.00 1119 reject_low 6 ALIGNMENT 0 YS2-3c07.q1k chrm 272 603 77897 77896 F 332 0.00 1360 reject_low 1,2,3 ALIGNMENT 0 YS2-3c07.p1k chrm 62 724 80168 80167 F 663 0.00 1119 reject_low 5 ALIGNMENT 0 YS2-3c07.p1k chrm 817 64 77867 77866 C 754 0.00 1119 reject_low 1 ALIGNMENT 33 YS2-3c07.p1k chrm 28 63 80164 80199 F 36 97.22 1119 reject_low 4 ALIGNMENT 29 YS2-3c07.p1k chrm 63 32 77866 77897 C 32 96.88 1119 reject_low 1 ALIGNMENT 24 YS2-3c07.p1k chrm 725 752 80168 80195 F 28 96.43 1119 reject_low 5 ALIGNMENT 36 YS2-3c07.q1k chrm 233 271 77859 77897 F 39 97.44 1360 reject_low 1,2,3 ALIGNMENT 0 YS2-3c07.p1k chrm 753 62 77898 77897 C 692 0.00 1119 reject_low 2 ALIGNMENT 0 YS2-3c07.p1k chrm 724 62 77898 77897 C 663 0.00 1119 reject_low 3 ALIGNMENT 0 YS2-3c07.p1k chrm 769 817 70395 70394 F 49 0.00 1119 accept 0 ALIGNMENT 32 YS2-3c07.p1k chrm 753 787 80167 80201 F 35 97.14 1119|8,0 reject_low 6 ALIGNMENT 0 YS2-3c07.p1k chrm 788 817 80201 80200 F 30 0.00 1119 reject_low 6 ALIGNMENT 0 YS2-3c07.q1k chrm 92 232 77859 77858 F 141 0.00 1360 reject_low 1,2,3 ALIGNMENT 0 YS2-3c07.p1k chrm 62 736 70364 70363 F 675 0.00 1119 accept 0 reject_low 6 ALIGNMENT 0 YS2-3c07.p1k chrm 64 817 80199 80198 F 754 0.00 1119 reject_low 4 ALIGNMENT 0 YS2-3c07.p1k chrm 753 817 80195 80194 F 65 0.00 1119 reject_low 5 ALIGNMENT 930 YS2-3c08.p1k chr15 27 1175 419073 420218 F 1149 95.04 1195 accept 0 ALIGNMENT 821 YS2-3c08.q1k chr15 1092 30 420927 421982 C 1063 93.41 1340 accept 0 ALIGNMENT 0 YS2-3c09.p1k chr12 548 566 328682 328681 F 19 0.00 566 accept_chi 0 ALIGNMENT 0 YS2-3c09.q1k vc_7 584 62 2728 2727 C 523 0.00 1349 reject_low 6 ALIGNMENT 215 YS2-3c09.q1k vc_2 585 913 2164 2477 F 329 92.10 1349 reject_low 3 ALIGNMENT 36 YS2-3c09.q1k vc_5 585 547 5025 5063 C 39 97.44 1349 reject_low 14 ALIGNMENT 215 YS2-3c09.q1k vc_5 585 913 2398 2711 F 329 92.10 1349 reject_low 5 ALIGNMENT 0 YS2-3c09.q1k vc_2 62 584 2164 2163 F 523 0.00 1349 reject_low 3 ALIGNMENT 0 YS2-3c09.q1k vc_3 544 62 2513 2512 C 483 0.00 1349 reject_low 13 ALIGNMENT 37 YS2-3c09.q1k vc_2 585 545 2105 2145 C 41 97.56 1349 reject_low 12 ALIGNMENT 37 YS2-3c09.q1k vc_1 585 545 2472 2512 C 41 97.56 1349 reject_low 11 ALIGNMENT 215 YS2-3c09.q1k vc_1 585 913 2531 2844 F 329 92.10 1349 reject_low 2 ALIGNMENT 148 YS2-3c09.q1k vc_4 585 748 6353 6514 F 164 98.17 1349|1,0 reject_low 9 ALIGNMENT 0 YS2-3c09.q1k vc_5 546 62 5064 5063 C 485 0.00 1349 reject_low 14 ALIGNMENT 0 YS2-3c09.q1k vc_5 643 583 2 1 C 61 0.00 1349 reject_low 16 ALIGNMENT 0 YS2-3c09.q1k vc_3 643 586 2473 2472 C 58 0.00 1349 reject_low 13 ALIGNMENT 496 YS2-3c09.p1k chr12 36 547 328170 328682 F 512 99.22 566 accept_chi 0 ALIGNMENT 37 YS2-3c09.q1k vc_4 545 585 5831 5871 F 41 97.56 1349 reject_low 9 ALIGNMENT 215 YS2-3c09.q1k vc_7 913 585 2414 2727 C 329 92.10 1349 reject_low 6 ALIGNMENT 33 YS2-3c09.q1k vc_5 582 547 1 36 C 36 97.22 1349 reject_low 16 ALIGNMENT 215 YS2-3c09.q1k vc_3 585 913 2531 2844 F 329 92.10 1349 reject_low 4 ALIGNMENT 0 YS2-3c09.q1k chr12 643 543 328171 328170 C 101 0.00 1349 accept_chi 1 ALIGNMENT 0 YS2-3c09.q1k vc_4 584 62 1535 1534 C 523 0.00 1349 reject_low 10 ALIGNMENT 208 YS2-3c09.q1k vc_4 913 585 5497 5812 C 329 91.49 1349 reject_low 7 ALIGNMENT 0 YS2-3c09.q1k vc_7 62 547 13525 13524 F 486 0.00 1349 reject_low 15 ALIGNMENT 0 YS2-3c09.q1k vc_2 643 586 2106 2105 C 58 0.00 1349 reject_low 12 ALIGNMENT 0 YS2-3c09.q1k vc_7 586 643 13562 13561 F 58 0.00 1349 reject_low 15 ALIGNMENT 0 YS2-3c09.q1k vc_4 62 544 5831 5830 F 483 0.00 1349 reject_low 9 ALIGNMENT 0 YS2-3c09.q1k vc_1 62 584 2531 2530 F 523 0.00 1349 reject_low 2 ALIGNMENT 35 YS2-3c09.q1k vc_7 548 585 13525 13562 F 38 97.37 1349 reject_low 15 ALIGNMENT 0 YS2-3c09.q1k vc_3 62 584 2531 2530 F 523 0.00 1349 reject_low 4 ALIGNMENT 83 YS2-3c09.q1k vc_4 674 585 1446 1534 C 90 98.89 1349 reject_low 10 ALIGNMENT 0 YS2-3c09.q1k vc_5 643 586 5026 5025 C 58 0.00 1349 reject_low 14 ALIGNMENT 0 YS2-3c09.q1k vc_4 584 62 5813 5812 C 523 0.00 1349 reject_low 7 ALIGNMENT 0 YS2-3c09.q1k vc_4 586 585 5872 6353 F 0 0.00 1349 reject_low 9 ALIGNMENT 0 YS2-3c09.q1k vc_5 62 584 2398 2397 F 523 0.00 1349 reject_low 5 ALIGNMENT 0 YS2-3c09.q1k vc_1 643 586 2473 2472 C 58 0.00 1349 reject_low 11 ALIGNMENT 37 YS2-3c09.q1k vc_3 585 545 2472 2512 C 41 97.56 1349 reject_low 13 ALIGNMENT 0 YS2-3c09.q1k vc_2 544 62 2146 2145 C 483 0.00 1349 reject_low 12 ALIGNMENT 0 YS2-3c09.q1k vc_5 546 62 37 36 C 485 0.00 1349 reject_low 16 ALIGNMENT 0 YS2-3c09.q1k vc_1 544 62 2513 2512 C 483 0.00 1349 reject_low 11 ALIGNMENT 489 YS2-3c09.q1k chr12 542 30 328170 328682 C 513 98.64 1349 accept_chi 1 ALIGNMENT 0 YS2-3c09.q1k vc_4 62 584 126 125 F 523 0.00 1349 reject_low 8 ALIGNMENT 148 YS2-3c09.q1k vc_4 585 748 126 287 F 164 98.17 1349 reject_low 8 ALIGNMENT 998 YS2-3c10.q1k chr15 1205 24 966515 967697 C 1182 96.36 1350 accept 0 ALIGNMENT 939 YS2-3c10.p1k chr15 32 1175 962757 963903 F 1144 95.10 1197 accept 0 ALIGNMENT 837 YS2-3c11.q1k chr12 1105 23 464365 465426 C 1083 94.00 1302 accept 1 ALIGNMENT 837 YS2-3c11.q1k chr12 1105 23 455228 456289 C 1083 94.00 1302 accept 0 ALIGNMENT 952 YS2-3c12.p1k chr15 27 1073 310416 311463 F 1047 97.52 1188 accept 0 ALIGNMENT 859 YS2-3c12.q1k chr15 1151 32 310458 311580 C 1120 93.75 1368 accept 0 ALIGNMENT 330 YS2-3c13.q1k vc_2 221 682 2164 2623 F 462 91.13 1452 reject_low 4 ALIGNMENT 145 YS2-3c13.q1k vc_7 682 432 4923 5171 C 251 86.85 1452 reject_low 6 ALIGNMENT 0 YS2-3c13.q1k vc_4 92 220 126 125 F 129 0.00 1452 reject_low 7 ALIGNMENT 0 YS2-3c13.q1k vc_3 180 92 2513 2512 C 89 0.00 1452 reject_low 12 ALIGNMENT 0 YS2-3c13.q1k vc_1 180 92 2513 2512 C 89 0.00 1452 reject_low 10 ALIGNMENT 39 YS2-3c13.q1k vc_5 221 183 5025 5063 C 39 100.00 1452 reject_low 13 ALIGNMENT 330 YS2-3c13.q1k vc_1 221 682 2531 2990 F 462 91.13 1452 reject_low 3 ALIGNMENT 0 YS2-3c13.q1k vc_5 182 92 37 36 C 91 0.00 1452 reject_low 15 ALIGNMENT 349 YS2-3c13.q1k vc_7 815 221 2136 2727 C 595 87.39 1452 reject_low 1 ALIGNMENT 0 YS2-3c13.q1k vc_2 180 92 2146 2145 C 89 0.00 1452 reject_low 11 ALIGNMENT 85 YS2-3c13.q1k vc_4 309 221 1446 1534 C 89 98.88 1452 reject_low 9 ALIGNMENT 36 YS2-3c13.q1k vc_5 218 183 1 36 C 36 100.00 1452 reject_low 15 ALIGNMENT 41 YS2-3c13.q1k vc_1 221 181 2472 2512 C 41 100.00 1452 reject_low 10 ALIGNMENT 0 YS2-3c13.q1k vc_7 220 92 2728 2727 C 129 0.00 1452 reject_low 1 ALIGNMENT 344 YS2-3c13.q1k vc_4 745 221 5289 5812 C 525 89.52 1452 reject_low 2 ALIGNMENT 0 YS2-3c13.q1k vc_4 220 92 5813 5812 C 129 0.00 1452 reject_low 2 ALIGNMENT 0 YS2-3c13.q1k vc_5 182 92 5064 5063 C 91 0.00 1452 reject_low 13 ALIGNMENT 0 YS2-3c13.q1k vc_7 431 92 5172 5171 C 340 0.00 1452 reject_low 6 ALIGNMENT 0 YS2-3c13.q1k vc_4 220 92 1535 1534 C 129 0.00 1452 reject_low 9 ALIGNMENT 0 YS2-3c13.q1k vc_4 92 180 5831 5830 F 89 0.00 1452 reject_low 8 ALIGNMENT 38 YS2-3c13.q1k vc_7 184 221 13525 13562 F 38 100.00 1452 reject_low 14 ALIGNMENT 0 YS2-3c13.q1k vc_3 92 220 2531 2530 F 129 0.00 1452 reject_low 5 ALIGNMENT 330 YS2-3c13.q1k vc_3 221 682 2531 2990 F 462 91.13 1452 reject_low 5 ALIGNMENT 350 YS2-3c13.q1k vc_5 221 862 2398 3032 F 642 86.29 1452 reject_vc 0 ALIGNMENT 41 YS2-3c13.q1k vc_4 181 221 5831 5871 F 41 100.00 1452 reject_low 8 ALIGNMENT 151 YS2-3c13.q1k vc_4 221 379 6353 6511 F 159 98.74 1452|1,0 reject_low 8 ALIGNMENT 0 YS2-3c13.q1k vc_5 92 220 2398 2397 F 129 0.00 1452 reject_vc 0 ALIGNMENT 151 YS2-3c13.q1k vc_4 221 379 126 284 F 159 98.74 1452 reject_low 7 ALIGNMENT 0 YS2-3c13.q1k vc_2 92 220 2164 2163 F 129 0.00 1452 reject_low 4 ALIGNMENT 41 YS2-3c13.q1k vc_3 221 181 2472 2512 C 41 100.00 1452 reject_low 12 ALIGNMENT 0 YS2-3c13.q1k vc_1 92 220 2531 2530 F 129 0.00 1452 reject_low 3 ALIGNMENT 0 YS2-3c13.q1k vc_7 92 183 13525 13524 F 92 0.00 1452 reject_low 14 ALIGNMENT 41 YS2-3c13.q1k vc_2 221 181 2105 2145 C 41 100.00 1452 reject_low 11 ALIGNMENT 0 YS2-3c13.q1k vc_4 222 221 5872 6353 F 0 0.00 1452 reject_low 8 ALIGNMENT 857 YS2-3c14.q1k chr02 26 1089 303255 304330 F 1064 95.21 1331 accept 0 ALIGNMENT 1053 YS2-3c14.p1k chr02 1196 29 303458 304625 C 1168 97.60 1197 accept 0 ALIGNMENT 0 YS2-3c16.q1k vc_3 62 819 2531 2530 F 758 0.00 1369 reject_low 6 ALIGNMENT 101 YS2-3c16.q1k vc_4 820 968 6353 6500 F 149 91.28 1369 reject_low 9 ALIGNMENT 0 YS2-3c16.q1k vc_5 781 62 37 36 C 720 0.00 1369 reject_low 16 ALIGNMENT 0 YS2-3c16.q1k vc_2 779 62 2146 2145 C 718 0.00 1369 reject_low 12 ALIGNMENT 0 YS2-3c16.q1k vc_1 62 819 2531 2530 F 758 0.00 1369 reject_low 4 ALIGNMENT 0 YS2-3c16.q1k vc_5 62 819 2398 2397 F 758 0.00 1369 reject_low 7 ALIGNMENT 0 YS2-3c16.q1k vc_4 62 779 5831 5830 F 718 0.00 1369 reject_low 9 ALIGNMENT 0 YS2-3c16.p1k chr16 772 790 817753 817752 F 19 0.00 790 accept_chi 0 ALIGNMENT 103 YS2-3c16.q1k vc_4 1004 820 5631 5812 C 185 87.57 1369 reject_low 2 ALIGNMENT 39 YS2-3c16.q1k vc_2 818 780 2107 2145 C 39 100.00 1369 reject_low 12 ALIGNMENT 0 YS2-3c16.q1k vc_5 781 62 5064 5063 C 720 0.00 1369 reject_low 14 ALIGNMENT 0 YS2-3c16.q1k vc_7 819 62 2728 2727 C 758 0.00 1369 reject_low 3 ALIGNMENT 103 YS2-3c16.q1k vc_7 1004 820 2546 2727 C 185 87.57 1369 reject_low 3 ALIGNMENT 102 YS2-3c16.q1k vc_1 820 1004 2531 2712 F 185 87.57 1369 reject_low 4 ALIGNMENT 102 YS2-3c16.q1k vc_3 820 1004 2531 2712 F 185 87.57 1369 reject_low 6 ALIGNMENT 36 YS2-3c16.q1k vc_7 783 818 13525 13560 F 36 100.00 1369 reject_low 15 ALIGNMENT 0 YS2-3c16.q1k vc_4 819 62 1535 1534 C 758 0.00 1369 reject_low 10 ALIGNMENT 102 YS2-3c16.q1k vc_2 820 1004 2164 2345 F 185 87.57 1369 reject_low 5 ALIGNMENT 101 YS2-3c16.q1k vc_4 820 968 126 273 F 149 91.28 1369 reject_low 8 ALIGNMENT 36 YS2-3c16.q1k vc_5 817 782 1 36 C 36 100.00 1369 reject_low 16 ALIGNMENT 0 YS2-3c16.q1k vc_7 62 782 13525 13524 F 721 0.00 1369 reject_low 15 ALIGNMENT 70 YS2-3c16.q1k vc_4 908 820 1448 1534 C 89 95.51 1369 reject_low 10 ALIGNMENT 0 YS2-3c16.q1k vc_3 779 62 2513 2512 C 718 0.00 1369 reject_low 13 ALIGNMENT 102 YS2-3c16.q1k vc_5 820 1004 2398 2579 F 185 87.57 1369 reject_low 7 ALIGNMENT 39 YS2-3c16.q1k vc_4 780 818 5831 5869 F 39 100.00 1369 reject_low 9 ALIGNMENT 689 YS2-3c16.p1k chr16 24 771 817006 817753 F 748 100.00 790 accept_chi 0 ALIGNMENT 689 YS2-3c16.q1k chr16 779 32 817006 817753 C 748 100.00 1369 accept_chi 1 ALIGNMENT 0 YS2-3c16.q1k vc_2 62 819 2164 2163 F 758 0.00 1369 reject_low 5 ALIGNMENT 0 YS2-3c16.q1k vc_4 819 62 5813 5812 C 758 0.00 1369 reject_low 2 ALIGNMENT 37 YS2-3c16.q1k vc_5 818 782 5027 5063 C 37 100.00 1369 reject_low 14 ALIGNMENT 39 YS2-3c16.q1k vc_3 818 780 2474 2512 C 39 100.00 1369 reject_low 13 ALIGNMENT 0 YS2-3c16.q1k vc_1 779 62 2513 2512 C 718 0.00 1369 reject_low 11 ALIGNMENT 39 YS2-3c16.q1k vc_1 818 780 2474 2512 C 39 100.00 1369 reject_low 11 ALIGNMENT 0 YS2-3c16.q1k vc_4 62 819 126 125 F 758 0.00 1369 reject_low 8 ALIGNMENT 0 YS2-3c16.q1k vc_4 819 819 5870 6352 F 1 0.00 1369 reject_low 9 ALIGNMENT 777 YS2-3c17.q1k chr02 896 27 178423 179288 C 870 97.47 1331 accept 0 ALIGNMENT 257 YS2-3c17.p1k chr02 35 407 174860 175242 F 373 91.42 1014 accept 0 ALIGNMENT 842 YS2-3c18.q1k chr12 1045 23 424619 425629 C 1023 95.21 1383 accept 0 ALIGNMENT 275 YS2-3c18.p1k chr12 27 514 421376 421861 F 488 89.55 936 accept 0 ALIGNMENT 394 YS2-3c19.q1k chr12 635 24 460213 460841 C 612 90.52 1261 accept 0 ALIGNMENT 582 YS2-3c19.p1k chr12 37 834 460007 460841 F 798 92.98 835 accept 0 ALIGNMENT 0 YS2-3c19.q1k chr12 639 92 460193 460192 C 548 0.00 1261 reject_low 1 ALIGNMENT 166 YS2-3c19.q1k chr12 297 24 451419 451704 C 274 89.42 1261 reject_low 2 ALIGNMENT 0 YS2-3c19.q1k chr12 479 298 451420 451419 C 182 0.00 1261 reject_low 2 ALIGNMENT 189 YS2-3c19.p1k chr12 562 834 451419 451704 F 273 92.31 835 reject_low 1 ALIGNMENT 25 YS2-3c19.q1k chr12 835 640 459997 460192 C 196 72.45 1261 reject_low 1 ALIGNMENT 0 YS2-3c19.p1k chr12 62 561 451419 451418 F 500 0.00 835 reject_low 1 ALIGNMENT 738 YS2-3c20.q1k chr12 25 942 509599 510507 F 918 94.77 1350 accept 0 ALIGNMENT 1019 YS2-3c20.p1k chr12 1153 25 512697 513824 C 1129 97.17 1153 accept 0 ALIGNMENT 854 YS2-3c21.q1k chr02 31 1018 615992 616984 F 988 96.15 1289 accept 0 ALIGNMENT 183 YS2-3c21.p1k chr02 634 249 620146 620529 C 386 82.90 1108 accept 0 ALIGNMENT 32 YS2-3c23.q1k vc_4 238 304 1548 1612 F 67 85.07 783 reject_low 8 ALIGNMENT 236 YS2-3c23.q1k vc_1 1 304 2689 2990 F 304 93.42 783 reject_low 3 ALIGNMENT 236 YS2-3c23.q1k vc_2 1 304 2322 2623 F 304 93.42 783 reject_low 4 ALIGNMENT 239 YS2-3c23.q1k vc_7 369 1 2210 2569 C 369 90.24 783 reject_vc 1 ALIGNMENT 32 YS2-3c23.q1k vc_4 304 238 6275 6339 C 67 85.07 783 reject_low 9 ALIGNMENT 239 YS2-3c23.q1k vc_5 1 369 2556 2915 F 369 90.24 783 reject_vc 0 ALIGNMENT 48 YS2-3c23.q1k vc_7 54 3 6360 6411 C 52 98.08 783|1,0 reject_low 6 ALIGNMENT 184 YS2-3c23.q1k vc_7 304 53 4923 5172 C 252 92.06 783|0,1 reject_low 6 ALIGNMENT 232 YS2-3c23.q1k vc_4 369 1 5293 5654 C 369 89.70 783 reject_vc 2 ALIGNMENT 236 YS2-3c23.q1k vc_3 1 304 2689 2990 F 304 93.42 783 reject_low 5 ALIGNMENT 32 YS2-3c23.q1k vc_4 304 238 48 112 C 67 85.07 783 reject_low 7 ALIGNMENT 0 YS2-3c23.q1k vc_7 53 54 5172 6360 C 0 0.00 783 reject_low 6 ALIGNMENT 932 YS2-3c24.p1k chr15 1089 33 166233 167275 C 1057 97.92 1101 accept_chi 0 ALIGNMENT 681 YS2-3c24.q1k chr16 1 788 669221 670006 F 788 97.21 1261 accept_chi 1 ALIGNMENT 834 YS2-3d01.q1k chr04 1035 34 290379 291367 C 1002 95.91 1389 accept 0 ALIGNMENT 120 YS2-3d02.p1k vc_7 1 225 456 682 F 225 86.22 797 reject_vc 4 ALIGNMENT 120 YS2-3d02.p1k vc_6 1 225 3712 3938 F 225 86.22 797 reject_vc 3 ALIGNMENT 120 YS2-3d02.p1k vc_7 1 225 13918 14144 F 225 86.22 797 reject_vc 5 ALIGNMENT 120 YS2-3d02.p1k vc_1 225 1 1523 1749 C 225 86.22 797 reject_vc 0 ALIGNMENT 120 YS2-3d02.p1k vc_3 225 1 1523 1749 C 225 86.22 797 reject_vc 1 ALIGNMENT 120 YS2-3d02.p1k vc_5 225 1 4443 4669 C 225 86.22 797 reject_vc 2 ALIGNMENT 0 YS2-3d03.q1k vc_7 304 304 4700 4921 C 1 0.00 1003 reject_vc 9 ALIGNMENT 0 YS2-3d03.q1k vc_4 237 62 6340 6339 C 176 0.00 1003 reject_low 11 ALIGNMENT 65 YS2-3d03.q1k vc_4 304 238 46 112 C 67 100.00 1003 reject_low 10 ALIGNMENT 302 YS2-3d03.q1k vc_3 1 303 2689 2991 F 303 100.00 1003 reject_vc 7 ALIGNMENT 467 YS2-3d03.q1k vc_5 1 650 2556 3211 F 650 91.85 1003 reject_vc 2 ALIGNMENT 0 YS2-3d03.q1k vc_4 305 307 1615 1878 F 3 0.00 1003 reject_vc 8 ALIGNMENT 247 YS2-3d03.q1k vc_7 303 53 4922 5172 C 251 99.60 1003|0,1 reject_vc 9 ALIGNMENT 0 YS2-3d03.q1k vc_7 53 54 5172 6360 C 0 0.00 1003 reject_vc 9 ALIGNMENT 0 YS2-3d03.p1k chr12 225 243 462653 462652 F 19 0.00 243 accept 1 ALIGNMENT 0 YS2-3d03.q1k vc_4 237 62 113 112 C 176 0.00 1003 reject_low 10 ALIGNMENT 0 YS2-3d03.q1k vc_4 62 237 1548 1547 F 176 0.00 1003 reject_vc 8 ALIGNMENT 200 YS2-3d03.p1k chr12 25 224 462454 462653 F 200 100.00 243 accept 1 ALIGNMENT 157 YS2-3d03.q1k vc_4 308 650 1879 2227 F 343 84.55 1003 reject_vc 8 ALIGNMENT 0 YS2-3d03.p1k chr12 225 243 453516 453515 F 19 0.00 243 accept 0 ALIGNMENT 93 YS2-3d03.q1k vc_7 422 305 4583 4699 C 118 94.07 1003 reject_vc 9 ALIGNMENT 65 YS2-3d03.q1k vc_4 238 304 1548 1614 F 67 100.00 1003 reject_vc 8 ALIGNMENT 391 YS2-3d03.q1k vc_4 422 1 5232 5654 C 422 97.87 1003 reject_vc 4 ALIGNMENT 302 YS2-3d03.q1k vc_1 1 303 2689 2991 F 303 100.00 1003 reject_vc 5 ALIGNMENT 460 YS2-3d03.q1k vc_7 610 1 1959 2569 C 610 92.62 1003 reject_vc 3 ALIGNMENT 65 YS2-3d03.q1k vc_4 304 238 6273 6339 C 67 100.00 1003 reject_low 11 ALIGNMENT 302 YS2-3d03.q1k vc_2 1 303 2322 2624 F 303 100.00 1003 reject_vc 6 ALIGNMENT 200 YS2-3d03.p1k chr12 25 224 453317 453516 F 200 100.00 243 accept 0 ALIGNMENT 51 YS2-3d03.q1k vc_7 54 3 6360 6411 C 52 100.00 1003|1,0 reject_vc 9 ALIGNMENT 418 YS2-3d04.p1k chr11 731 125 188843 189442 C 607 91.27 1298 accept 0 ALIGNMENT 882 YS2-3d04.q1k chr11 25 1036 183184 184205 F 1012 97.33 1426 accept 0 ALIGNMENT 0 YS2-3d05.p1k chr04 224 207 1363486 1363485 C 18 0.00 224 accept 0 ALIGNMENT 170 YS2-3d05.p1k chr04 206 29 1363485 1363663 C 178 99.44 224 accept 0 ALIGNMENT 162 YS2-3d06.p1k chr11 28 202 276245 276421 F 175 98.86 220 accept 0 ALIGNMENT 0 YS2-3d06.p1k chr11 203 220 276421 276420 F 18 0.00 220 accept 0 ALIGNMENT 535 YS2-3d07.p1k chr15 813 109 708583 709291 C 705 92.06 1174 ambiguous_trans 5 ALIGNMENT 616 YS2-3d07.q1k chr14 820 29 523578 524365 C 792 94.82 1405 reject_low 13 ALIGNMENT 584 YS2-3d07.q1k chr16 29 741 805339 806052 F 713 95.79 1405 reject_low 17 ALIGNMENT 583 YS2-3d07.q1k chr10 741 30 476887 477599 C 712 95.79 1405 reject_low 18 ALIGNMENT 679 YS2-3d07.q1k chr15 874 29 974710 975544 C 846 96.22 1405 ambiguous_trans 0 ALIGNMENT 626 YS2-3d07.q1k chr04 29 741 878996 879709 F 713 97.76 1405 reject_low 15 ALIGNMENT 521 YS2-3d07.p1k chr07 116 836 812192 812914 F 721 90.98 1174 ambiguous_trans 2 ALIGNMENT 673 YS2-3d07.q1k chr02 874 29 34069 34903 C 846 95.98 1405 ambiguous_trans 1 ALIGNMENT 518 YS2-3d07.p1k chr14 836 116 566530 567252 C 721 90.85 1174 ambiguous_trans 6 ALIGNMENT 670 YS2-3d07.q1k chr04 874 29 876244 877078 C 846 95.86 1405 ambiguous_trans 8 ALIGNMENT 471 YS2-3d07.p1k chr06 116 711 138648 139242 F 596 92.62 1174 ambiguous_trans 11 ALIGNMENT 682 YS2-3d07.q1k chr14 29 869 562730 563560 F 841 96.31 1405 ambiguous_trans 6 ALIGNMENT 547 YS2-3d07.q1k chr13 741 30 188674 189386 C 712 94.10 1405 reject_low 20 ALIGNMENT 688 YS2-3d07.q1k chr07 29 869 569441 570271 F 841 96.55 1405 ambiguous_trans 4 ALIGNMENT 521 YS2-3d07.p1k chr12 116 836 941929 942651 F 721 90.98 1174 ambiguous_trans 3 ALIGNMENT 514 YS2-3d07.p1k chr03 116 813 85550 86250 F 698 91.26 1174 ambiguous_trans 7 ALIGNMENT 521 YS2-3d07.p1k chr07 836 116 573242 573964 C 721 90.98 1174 ambiguous_trans 4 ALIGNMENT 517 YS2-3d07.q1k chr13 741 30 200841 201553 C 712 92.84 1405 reject_low 24 ALIGNMENT 688 YS2-3d07.q1k chr06 874 29 142336 143170 C 846 96.57 1405 ambiguous_trans 11 ALIGNMENT 688 YS2-3d07.q1k chr07 874 29 815880 816714 C 846 96.57 1405 ambiguous_trans 2 ALIGNMENT 527 YS2-3d07.p1k chr15 109 836 971014 971744 F 728 91.07 1174 ambiguous_trans 0 ALIGNMENT 512 YS2-3d07.p1k chr04 109 745 872548 873184 F 637 93.25 1174 ambiguous_trans 8 ALIGNMENT 641 YS2-3d07.q1k chr04 29 741 646195 646908 F 713 98.46 1405 reject_low 14 ALIGNMENT 517 YS2-3d07.q1k chr05 30 741 444095 444807 F 712 92.84 1405 reject_low 23 ALIGNMENT 541 YS2-3d07.q1k chr16 30 741 851328 852040 F 712 93.82 1405 reject_low 22 ALIGNMENT 0 YS2-3d07.q1k chr10 76 62 483136 483135 C 15 0.00 1405 reject_low 26 ALIGNMENT 547 YS2-3d07.q1k chr16 741 30 848921 849633 C 712 94.10 1405 reject_low 21 ALIGNMENT 539 YS2-3d07.p1k chr12 836 109 980234 980964 C 728 91.62 1174 reject_low 12 ALIGNMENT 688 YS2-3d07.q1k chr03 874 29 89238 90072 C 846 96.57 1405 ambiguous_trans 7 ALIGNMENT 317 YS2-3d07.q1k chr10 741 77 482471 483135 C 665 84.51 1405 reject_low 26 ALIGNMENT 673 YS2-3d07.q1k chr15 29 869 704761 705591 F 841 96.08 1405 ambiguous_trans 5 ALIGNMENT 679 YS2-3d07.q1k chr04 29 826 514381 515173 F 798 97.37 1405 ambiguous_trans 9 ALIGNMENT 530 YS2-3d07.p1k chr02 109 836 30373 31103 F 728 91.21 1174 ambiguous_trans 1 ALIGNMENT 679 YS2-3d07.q1k chr12 874 29 945617 946451 C 846 96.22 1405 ambiguous_trans 3 ALIGNMENT 586 YS2-3d07.q1k chr04 874 29 985593 986427 C 846 92.55 1405 ambiguous_trans 10 ALIGNMENT 511 YS2-3d07.p1k chr04 813 116 518203 518903 C 698 91.12 1174 ambiguous_trans 9 ALIGNMENT 562 YS2-3d07.q1k chr01 30 741 160941 161653 F 712 94.80 1405 reject_low 19 ALIGNMENT 518 YS2-3d07.p1k chr04 116 836 981905 982627 F 721 90.85 1174 ambiguous_trans 10 ALIGNMENT 584 YS2-3d07.q1k chr07 29 741 562545 563258 F 713 95.79 1405 reject_low 16 ALIGNMENT 439 YS2-3d07.q1k chr05 30 741 493194 493906 F 712 89.04 1405 reject_low 25 ALIGNMENT 0 YS2-3d08.q1k vc_7 53 54 5172 6360 C 0 0.00 976 reject_low 7 ALIGNMENT 0 YS2-3d08.q1k vc_7 304 304 4700 4921 C 1 0.00 976 reject_low 7 ALIGNMENT 0 YS2-3d08.q1k vc_4 237 62 6340 6339 C 176 0.00 976 reject_low 9 ALIGNMENT 380 YS2-3d08.q1k vc_4 420 1 5232 5654 C 420 97.14 976 reject_low 2 ALIGNMENT 62 YS2-3d08.q1k vc_4 304 238 46 112 C 67 98.51 976 reject_low 8 ALIGNMENT 62 YS2-3d08.q1k vc_4 238 304 1548 1614 F 67 98.51 976 reject_low 6 ALIGNMENT 0 YS2-3d08.q1k vc_4 62 237 1548 1547 F 176 0.00 976 reject_low 6 ALIGNMENT 296 YS2-3d08.q1k vc_1 1 303 2689 2991 F 303 99.34 976 reject_low 3 ALIGNMENT 179 YS2-3d08.q1k vc_4 308 728 1879 2289 F 421 83.37 976 reject_low 6 ALIGNMENT 0 YS2-3d08.q1k vc_4 237 62 113 112 C 176 0.00 976 reject_low 8 ALIGNMENT 241 YS2-3d08.q1k vc_7 303 53 4922 5172 C 251 98.80 976|0,1 reject_low 7 ALIGNMENT 0 YS2-3d08.q1k vc_4 305 307 1615 1878 F 3 0.00 976 reject_low 6 ALIGNMENT 453 YS2-3d08.q1k vc_7 559 1 2013 2569 C 559 94.45 976 reject_low 1 ALIGNMENT 62 YS2-3d08.q1k vc_4 304 238 6273 6339 C 67 98.51 976 reject_low 9 ALIGNMENT 482 YS2-3d08.q1k vc_5 1 728 2556 3273 F 728 90.25 976 reject_vc 0 ALIGNMENT 51 YS2-3d08.q1k vc_7 54 3 6360 6411 C 52 100.00 976|1,0 reject_low 7 ALIGNMENT 296 YS2-3d08.q1k vc_3 1 303 2689 2991 F 303 99.34 976 reject_low 5 ALIGNMENT 296 YS2-3d08.q1k vc_2 1 303 2322 2624 F 303 99.34 976 reject_low 4 ALIGNMENT 89 YS2-3d08.q1k vc_7 420 305 4583 4699 C 116 93.10 976 reject_low 7 ALIGNMENT 898 YS2-3d09.q1k chr14 1154 34 770997 772105 C 1121 95.18 1345 accept 0 ALIGNMENT 0 YS2-3d09.p1k chr16 185 62 447768 447767 C 124 0.00 1175 reject_low 2 ALIGNMENT 115 YS2-3d09.p1k chr04 213 737 468583 469107 F 525 74.29 1175 reject_low 1 ALIGNMENT 941 YS2-3d09.p1k chr14 34 1090 767491 768558 F 1057 97.07 1175 accept 0 ALIGNMENT 56 YS2-3d09.p1k chr16 793 522 447157 447428 C 272 73.90 1175 reject_low 2 ALIGNMENT 0 YS2-3d09.p1k chr04 738 772 469107 469106 F 35 0.00 1175 reject_low 1 ALIGNMENT 0 YS2-3d09.p1k chr04 62 212 468583 468582 F 151 0.00 1175 reject_low 1 ALIGNMENT 0 YS2-3d09.p1k chr16 521 245 447429 447708 C 277 0.00 1175 reject_low 2 ALIGNMENT 20 YS2-3d09.p1k chr16 244 186 447709 447767 C 59 77.97 1175 reject_low 2 ALIGNMENT 0 YS2-3d10.p1k chr15 380 362 913581 913580 C 19 0.00 380 accept 0 ALIGNMENT 265 YS2-3d10.q1k vc_3 1 295 2689 2985 F 295 96.95 772 reject_vc 6 ALIGNMENT 60 YS2-3d10.q1k vc_7 413 303 4584 4699 C 111 86.49 772 reject_vc 7 ALIGNMENT 33 YS2-3d10.q1k vc_4 295 238 53 112 C 58 87.93 772 reject_vc 9 ALIGNMENT 51 YS2-3d10.q1k vc_7 54 3 6360 6411 C 52 100.00 772|1,0 reject_vc 7 ALIGNMENT 265 YS2-3d10.q1k vc_2 1 295 2322 2618 F 295 96.95 772 reject_vc 5 ALIGNMENT 210 YS2-3d10.q1k vc_7 295 53 4928 5172 C 243 95.88 772|0,1 reject_vc 7 ALIGNMENT 0 YS2-3d10.q1k vc_7 53 54 5172 6360 C 0 0.00 772 reject_vc 7 ALIGNMENT 33 YS2-3d10.q1k vc_4 238 295 1548 1607 F 58 87.93 772 reject_vc 8 ALIGNMENT 76 YS2-3d10.q1k vc_4 308 616 1882 2189 F 309 77.99 772 reject_vc 8 ALIGNMENT 318 YS2-3d10.q1k vc_4 413 1 5233 5654 C 413 92.98 772 reject_vc 3 ALIGNMENT 336 YS2-3d10.q1k vc_7 508 1 2059 2569 C 508 90.16 772 reject_vc 2 ALIGNMENT 33 YS2-3d10.q1k vc_4 295 238 6280 6339 C 58 87.93 772 reject_vc 10 ALIGNMENT 265 YS2-3d10.q1k vc_1 1 295 2689 2985 F 295 96.95 772 reject_vc 4 ALIGNMENT 0 YS2-3d10.q1k vc_7 302 296 4700 4927 C 7 0.00 772 reject_vc 7 ALIGNMENT 0 YS2-3d10.q1k vc_4 296 307 1608 1881 F 12 0.00 772 reject_vc 8 ALIGNMENT 323 YS2-3d10.p1k chr15 361 29 913580 913913 C 333 99.70 380 accept 0 ALIGNMENT 343 YS2-3d10.q1k vc_5 1 616 2556 3173 F 616 86.85 772 reject_vc 1 ALIGNMENT 82 YS2-3d11.p1k chr10 40 215 483600 483782 F 176 85.23 1111 reject_low 14 ALIGNMENT 74 YS2-3d11.p1k chr10 372 449 422852 422930 F 78 98.72 1111 reject_low 1 ALIGNMENT 62 YS2-3d11.p1k chr06 104 215 158471 158581 F 112 89.29 1111 reject_low 19 ALIGNMENT 0 YS2-3d11.p1k chr10 216 688 483782 483781 F 473 0.00 1111 reject_low 14 ALIGNMENT 23 YS2-3d11.p1k chr08 194 110 134010 134094 C 85 80.00 1111 reject_low 24 ALIGNMENT 0 YS2-3d11.p1k chr06 136 688 138054 138053 F 553 0.00 1111 reject_low 21 ALIGNMENT 102 YS2-3d11.p1k chr07 40 215 535266 535442 F 176 88.64 1111 reject_low 10 ALIGNMENT 68 YS2-3d11.p1k chr01 215 29 160343 160535 C 187 81.28 1111 reject_low 17 ALIGNMENT 0 YS2-3d11.p1k chr15 62 371 976416 976415 F 310 0.00 1111 reject_low 4 ALIGNMENT 0 YS2-3d11.p1k chr06 157 688 137818 137817 F 532 0.00 1111 reject_low 16 ALIGNMENT 47 YS2-3d11.p1k chr12 215 65 365915 366067 C 151 80.79 1111 reject_low 23 ALIGNMENT 46 YS2-3d11.p1k chr06 34 135 137953 138054 F 102 83.33 1111 reject_low 21 ALIGNMENT 801 YS2-3d11.p1k chr13 1109 29 572216 573297 C 1081 92.60 1111 accept 0 ALIGNMENT 0 YS2-3d11.p1k chr11 688 216 517200 517199 C 473 0.00 1111 reject_low 11 ALIGNMENT 0 YS2-3d11.p1k chr07 216 688 115169 115168 F 473 0.00 1111 reject_low 5 ALIGNMENT 0 YS2-3d11.p1k chr13 688 216 357109 357108 C 473 0.00 1111 reject_low 12 ALIGNMENT 93 YS2-3d11.p1k chr06 215 40 161902 162078 C 176 86.93 1111 reject_low 13 ALIGNMENT 68 YS2-3d11.p1k chr15 372 443 976416 976488 F 72 98.61 1111 reject_low 4 ALIGNMENT 0 YS2-3d11.p1k chr06 216 688 158581 158580 F 473 0.00 1111 reject_low 19 ALIGNMENT 0 YS2-3d11.p1k chr10 688 451 390953 390952 C 238 0.00 1111 reject_low 2 ALIGNMENT 0 YS2-3d11.p1k chr10 62 371 422852 422851 F 310 0.00 1111 reject_low 1 ALIGNMENT 0 YS2-3d11.p1k chr12 688 216 818178 818177 C 473 0.00 1111 reject_low 9 ALIGNMENT 0 YS2-3d11.p1k chr15 213 688 594736 594735 F 476 0.00 1111 reject_low 7 ALIGNMENT 102 YS2-3d11.p1k chr13 215 40 357108 357284 C 176 88.64 1111 reject_low 12 ALIGNMENT 61 YS2-3d11.p1k chr11 215 38 513277 513453 C 178 81.46 1111 reject_low 18 ALIGNMENT 0 YS2-3d11.p1k chr13 688 216 463229 463228 C 473 0.00 1111 reject_low 6 ALIGNMENT 872 YS2-3d11.q1k chr13 30 1139 568190 569300 F 1110 93.87 1338 accept 0 ALIGNMENT 0 YS2-3d11.p1k chr06 62 103 158471 158470 F 42 0.00 1111 reject_low 19 ALIGNMENT 102 YS2-3d11.p1k chr12 215 33 818177 818359 C 183 87.43 1111 reject_low 9 ALIGNMENT 0 YS2-3d11.p1k chr08 109 62 134095 134094 C 48 0.00 1111 reject_low 24 ALIGNMENT 0 YS2-3d11.p1k chr06 136 688 143681 143680 F 553 0.00 1111 reject_low 22 ALIGNMENT 72 YS2-3d11.p1k chr10 450 372 390952 391031 C 79 97.47 1111 reject_low 2 ALIGNMENT 0 YS2-3d11.p1k chr06 688 216 161903 161902 C 473 0.00 1111 reject_low 13 ALIGNMENT 0 YS2-3d11.p1k chr04 62 370 1175820 1175819 F 309 0.00 1111 reject_low 3 ALIGNMENT 46 YS2-3d11.p1k chr06 34 135 143580 143681 F 102 83.33 1111 reject_low 22 ALIGNMENT 102 YS2-3d11.p1k chr15 30 212 594554 594736 F 183 87.43 1111 reject_low 7 ALIGNMENT 103 YS2-3d11.p1k chr08 32 215 133715 133898 F 184 87.50 1111 reject_low 8 ALIGNMENT 0 YS2-3d11.p1k chr12 688 216 365916 365915 C 473 0.00 1111 reject_low 23 ALIGNMENT 0 YS2-3d11.p1k chr07 216 688 535442 535441 F 473 0.00 1111 reject_low 10 ALIGNMENT 118 YS2-3d11.p1k chr13 215 30 463228 463412 C 186 90.32 1111 reject_low 6 ALIGNMENT 0 YS2-3d11.p1k chr10 371 62 391032 391031 C 310 0.00 1111 reject_low 2 ALIGNMENT 102 YS2-3d11.p1k chr11 215 40 517199 517375 C 176 88.64 1111 reject_low 11 ALIGNMENT 0 YS2-3d11.p1k chr10 450 688 422930 422929 F 239 0.00 1111 reject_low 1 ALIGNMENT 123 YS2-3d11.p1k chr07 30 215 114984 115169 F 186 90.86 1111 reject_low 5 ALIGNMENT 0 YS2-3d11.p1k chr01 688 216 160344 160343 C 473 0.00 1111 reject_low 17 ALIGNMENT 46 YS2-3d11.p1k chr04 135 34 878485 878586 C 102 83.33 1111 reject_low 20 ALIGNMENT 0 YS2-3d11.p1k chr08 216 688 133898 133897 F 473 0.00 1111 reject_low 8 ALIGNMENT 69 YS2-3d11.p1k chr04 371 443 1175820 1175893 F 73 98.63 1111 reject_low 3 ALIGNMENT 77 YS2-3d11.p1k chr06 40 156 137702 137818 F 117 90.60 1111 reject_low 16 ALIGNMENT 78 YS2-3d11.p1k chr04 215 32 520273 520452 C 184 84.24 1111 reject_low 15 ALIGNMENT 0 YS2-3d11.p1k chr11 688 216 513278 513277 C 473 0.00 1111 reject_low 18 ALIGNMENT 0 YS2-3d11.p1k chr08 688 195 134011 134010 C 494 0.00 1111 reject_low 24 ALIGNMENT 0 YS2-3d11.p1k chr04 688 136 878486 878485 C 553 0.00 1111 reject_low 20 ALIGNMENT 0 YS2-3d11.p1k chr04 444 688 1175893 1175892 F 245 0.00 1111 reject_low 3 ALIGNMENT 0 YS2-3d11.p1k chr15 444 688 976488 976487 F 245 0.00 1111 reject_low 4 ALIGNMENT 0 YS2-3d11.p1k chr04 688 216 520274 520273 C 473 0.00 1111 reject_low 15 ALIGNMENT 51 YS2-3d13.q1k vc_7 54 3 6360 6411 C 52 100.00 956|1,0 reject_vc 8 ALIGNMENT 247 YS2-3d13.q1k vc_7 303 53 4922 5172 C 251 99.60 956|0,1 reject_vc 8 ALIGNMENT 65 YS2-3d13.q1k vc_4 304 238 6273 6339 C 67 100.00 956 reject_low 10 ALIGNMENT 0 YS2-3d13.p1k chr15 210 228 153423 153422 F 19 0.00 228 accept 0 ALIGNMENT 408 YS2-3d13.q1k vc_4 419 1 5234 5654 C 419 99.28 956 reject_vc 3 ALIGNMENT 65 YS2-3d13.q1k vc_4 304 238 46 112 C 67 100.00 956 reject_low 9 ALIGNMENT 65 YS2-3d13.q1k vc_4 238 304 1548 1614 F 67 100.00 956 reject_vc 7 ALIGNMENT 302 YS2-3d13.q1k vc_3 1 303 2689 2991 F 303 100.00 956 reject_vc 6 ALIGNMENT 0 YS2-3d13.q1k vc_7 53 54 5172 6360 C 0 0.00 956 reject_vc 8 ALIGNMENT 110 YS2-3d13.q1k vc_7 419 305 4585 4699 C 115 99.13 956 reject_vc 8 ALIGNMENT 503 YS2-3d13.q1k vc_7 704 1 1878 2569 C 704 91.90 956 reject_vc 1 ALIGNMENT 163 YS2-3d13.p1k chr15 36 209 153250 153423 F 174 98.28 228 accept 0 ALIGNMENT 0 YS2-3d13.q1k vc_4 237 62 6340 6339 C 176 0.00 956 reject_low 10 ALIGNMENT 302 YS2-3d13.q1k vc_1 1 303 2689 2991 F 303 100.00 956 reject_vc 4 ALIGNMENT 0 YS2-3d13.q1k vc_4 237 62 113 112 C 176 0.00 956 reject_low 9 ALIGNMENT 302 YS2-3d13.q1k vc_2 1 303 2322 2624 F 303 100.00 956 reject_vc 5 ALIGNMENT 0 YS2-3d13.q1k vc_4 62 237 1548 1547 F 176 0.00 956 reject_vc 7 ALIGNMENT 192 YS2-3d13.q1k vc_4 308 638 1879 2201 F 331 87.92 956 reject_vc 7 ALIGNMENT 0 YS2-3d13.q1k vc_4 305 307 1615 1878 F 3 0.00 956 reject_vc 7 ALIGNMENT 502 YS2-3d13.q1k vc_5 1 704 2556 3247 F 704 91.62 956 reject_vc 2 ALIGNMENT 0 YS2-3d13.q1k vc_7 304 304 4700 4921 C 1 0.00 956 reject_vc 8 ALIGNMENT 0 YS2-3d14.p1k vc_2 915 62 2106 2105 C 854 0.00 1201 reject_low 3 ALIGNMENT 0 YS2-3d14.p1k vc_1 915 62 2106 2105 C 854 0.00 1201 reject_low 2 ALIGNMENT 181 YS2-3d14.p1k vc_4 916 1199 5871 6154 F 284 88.73 1201 reject_low 5 ALIGNMENT 24 YS2-3d14.p1k vc_1 944 916 2443 2472 C 29 96.55 1201 reject_low 9 ALIGNMENT 0 YS2-3d14.p1k vc_5 915 62 5026 5025 C 854 0.00 1201 reject_low 6 ALIGNMENT 0 YS2-3d14.p1k vc_1 915 62 2473 2472 C 854 0.00 1201 reject_low 9 ALIGNMENT 0 YS2-3d14.p1k vc_3 915 62 2106 2105 C 854 0.00 1201 reject_low 4 ALIGNMENT 181 YS2-3d14.p1k vc_2 1199 916 1822 2105 C 284 88.73 1201 reject_low 3 ALIGNMENT 181 YS2-3d14.p1k vc_7 916 1199 100 383 F 284 88.73 1201 reject_low 7 ALIGNMENT 181 YS2-3d14.p1k vc_1 1199 916 1822 2105 C 284 88.73 1201 reject_low 2 ALIGNMENT 24 YS2-3d14.p1k vc_3 944 916 2443 2472 C 29 96.55 1201 reject_low 10 ALIGNMENT 0 YS2-3d14.p1k vc_3 915 62 2473 2472 C 854 0.00 1201 reject_low 10 ALIGNMENT 181 YS2-3d14.p1k vc_7 916 1199 13562 13845 F 284 88.73 1201 reject_low 8 ALIGNMENT 742 YS2-3d14.q1k chr13 28 900 204281 205148 F 873 96.33 1377 accept_chi 1 ALIGNMENT 0 YS2-3d14.p1k vc_7 62 915 13562 13561 F 854 0.00 1201 reject_low 8 ALIGNMENT 0 YS2-3d14.p1k vc_4 62 915 5871 5870 F 854 0.00 1201 reject_low 5 ALIGNMENT 0 YS2-3d14.p1k vc_7 62 915 100 99 F 854 0.00 1201 reject_low 7 ALIGNMENT 181 YS2-3d14.p1k vc_3 1199 916 1822 2105 C 284 88.73 1201 reject_low 4 ALIGNMENT 838 YS2-3d14.p1k chr13 899 28 204281 205152 C 872 99.31 1201 accept_chi 0 ALIGNMENT 181 YS2-3d14.p1k vc_5 1199 916 4742 5025 C 284 88.73 1201 reject_low 6 ALIGNMENT 0 YS2-3d15.q1k chr03 62 583 270709 270708 F 522 0.00 1398 reject_low 1 ALIGNMENT 30 YS2-3d15.q1k chr03 584 694 270709 270819 F 111 76.58 1398 reject_low 1 ALIGNMENT 0 YS2-3d15.q1k chr03 521 790 270993 270992 F 270 0.00 1398 reject_low 2 ALIGNMENT 0 YS2-3d15.q1k chr03 695 790 270819 270818 F 96 0.00 1398 reject_low 1 ALIGNMENT 29 YS2-3d15.q1k chr03 410 520 270883 270993 F 111 76.58 1398 reject_low 2 ALIGNMENT 920 YS2-3d15.q1k chr03 34 1121 270335 271407 F 1088 96.97 1398 accept 0 ALIGNMENT 0 YS2-3d15.q1k chr03 62 409 270883 270882 F 348 0.00 1398 reject_low 2 ALIGNMENT 967 YS2-3d16.p1k chr15 30 1143 492662 493781 F 1114 96.41 1144 accept 0 ALIGNMENT 825 YS2-3d16.q1k chr15 1038 32 494360 495365 C 1007 94.64 1346 accept 0 ALIGNMENT 20 YS2-3d17.p1k vc_2 303 322 2145 2164 F 20 100.00 1153 reject_low 9 ALIGNMENT 0 YS2-3d17.p1k vc_5 321 62 5026 5025 C 260 0.00 1153 reject_low 4 ALIGNMENT 0 YS2-3d17.p1k vc_1 321 62 2106 2105 C 260 0.00 1153 reject_low 1 ALIGNMENT 20 YS2-3d17.p1k vc_3 303 322 2512 2531 F 20 100.00 1153 reject_low 10 ALIGNMENT 155 YS2-3d17.p1k vc_3 740 322 1673 2105 C 419 80.91 1153 reject_low 3 ALIGNMENT 149 YS2-3d17.p1k vc_4 322 624 5871 6179 F 303 84.16 1153 reject_low 7 ALIGNMENT 0 YS2-3d17.p1k vc_1 321 62 2473 2472 C 260 0.00 1153 reject_low 14 ALIGNMENT 0 YS2-3d17.p1k chr03 304 322 47089 47088 F 19 0.00 1153 accept 0 ALIGNMENT 255 YS2-3d17.p1k chr03 32 303 46816 47089 F 272 99.26 1153 accept 0 ALIGNMENT 26 YS2-3d17.p1k vc_1 352 322 2441 2472 C 31 96.77 1153 reject_low 14 ALIGNMENT 26 YS2-3d17.p1k vc_3 352 322 2441 2472 C 31 96.77 1153 reject_low 15 ALIGNMENT 155 YS2-3d17.p1k vc_5 740 322 4593 5025 C 419 80.91 1153 reject_low 4 ALIGNMENT 0 YS2-3d17.p1k vc_7 302 62 2747 2746 C 241 0.00 1153 reject_low 13 ALIGNMENT 0 YS2-3d17.p1k vc_4 302 62 5832 5831 C 241 0.00 1153 reject_low 11 ALIGNMENT 0 YS2-3d17.p1k vc_3 321 62 2473 2472 C 260 0.00 1153 reject_low 15 ALIGNMENT 0 YS2-3d17.p1k vc_7 62 321 100 99 F 260 0.00 1153 reject_low 5 ALIGNMENT 20 YS2-3d17.p1k vc_1 303 322 2512 2531 F 20 100.00 1153 reject_low 8 ALIGNMENT 0 YS2-3d17.p1k vc_3 321 62 2106 2105 C 260 0.00 1153 reject_low 3 ALIGNMENT 20 YS2-3d17.p1k vc_7 322 303 2727 2746 C 20 100.00 1153 reject_low 13 ALIGNMENT 155 YS2-3d17.p1k vc_7 322 740 100 532 F 419 80.67 1153 reject_low 5 ALIGNMENT 0 YS2-3d17.p1k vc_1 62 302 2512 2511 F 241 0.00 1153 reject_low 8 ALIGNMENT 155 YS2-3d17.p1k vc_1 740 322 1673 2105 C 419 80.91 1153 reject_low 1 ALIGNMENT 0 YS2-3d17.p1k vc_2 321 62 2106 2105 C 260 0.00 1153 reject_low 2 ALIGNMENT 0 YS2-3d17.p1k vc_7 62 321 13562 13561 F 260 0.00 1153 reject_low 6 ALIGNMENT 20 YS2-3d17.p1k vc_4 322 303 5812 5831 C 20 100.00 1153 reject_low 11 ALIGNMENT 20 YS2-3d17.p1k vc_5 303 322 2379 2398 F 20 100.00 1153 reject_low 12 ALIGNMENT 0 YS2-3d17.p1k vc_5 62 302 2379 2378 F 241 0.00 1153 reject_low 12 ALIGNMENT 0 YS2-3d17.p1k vc_2 62 302 2145 2144 F 241 0.00 1153 reject_low 9 ALIGNMENT 155 YS2-3d17.p1k vc_2 740 322 1673 2105 C 419 80.91 1153 reject_low 2 ALIGNMENT 155 YS2-3d17.p1k vc_7 322 740 13562 13994 F 419 80.67 1153 reject_low 6 ALIGNMENT 0 YS2-3d17.p1k vc_4 62 321 5871 5870 F 260 0.00 1153 reject_low 7 ALIGNMENT 0 YS2-3d17.p1k vc_3 62 302 2512 2511 F 241 0.00 1153 reject_low 10 ALIGNMENT 885 YS2-3d19.q1k chr07 1156 26 215494 216630 C 1131 93.72 1281 accept 0 ALIGNMENT 861 YS2-3d19.p1k chr07 33 1055 214864 215879 F 1023 96.09 1190 accept 0 ALIGNMENT 455 YS2-3d20.q1k chrm 724 47 25183 25853 C 678 94.99 1365 accept 0 ALIGNMENT 0 YS2-3d20.q1k chrm 515 496 25411 25410 C 20 0.00 1365 reject_low 1 ALIGNMENT 334 YS2-3d20.q1k chrm 495 56 25410 25844 C 440 97.50 1365 reject_low 1 ALIGNMENT 819 YS2-3d20.p1k chrm 34 1084 22879 23925 F 1051 98.38 1189 accept 0 ALIGNMENT 899 YS2-3d21.q1k chr15 26 1137 765256 766383 F 1112 94.87 1303 accept_chi 0 ALIGNMENT 151 YS2-3d21.p1k chr07 314 3 900137 900472 C 312 85.58 1123 accept_chi 1 ALIGNMENT 962 YS2-3d22.q1k chr04 24 1177 931640 932798 F 1154 94.89 1306 accept 0 ALIGNMENT 0 YS2-3d23.q1k chr08 369 228 542725 542724 C 142 0.00 1279 reject_low 3 ALIGNMENT 0 YS2-3d23.q1k chr09 228 305 24153 24152 F 78 0.00 1279 reject_low 7 ALIGNMENT 497 YS2-3d23.p1k chr08 38 674 523007 523651 F 637 93.72 953 accept 0 ALIGNMENT 188 YS2-3d23.q1k chr08 789 370 542306 542724 C 420 81.90 1279 reject_low 3 ALIGNMENT 23 YS2-3d23.q1k chr09 306 337 24153 24184 F 32 93.75 1279 reject_low 7 ALIGNMENT 0 YS2-3d23.q1k chr15 228 291 29597 29596 F 64 0.00 1279 reject_low 6 ALIGNMENT 587 YS2-3d23.q1k chr09 32 862 23958 24785 F 831 90.85 1279 ambiguous_tel 1 ALIGNMENT 61 YS2-3d23.q1k chr09 262 337 24149 24223 F 76 96.05 1279 reject_low 5 ALIGNMENT 0 YS2-3d23.q1k chr01 369 228 222114 222113 C 142 0.00 1279 reject_low 4 ALIGNMENT 183 YS2-3d23.q1k chr15 59 774 29414 30123 F 716 76.96 1279 reject_low 2 ALIGNMENT 185 YS2-3d23.q1k chr01 789 370 221695 222113 C 420 81.67 1279 reject_low 4 ALIGNMENT 27 YS2-3d23.q1k chr15 292 341 29597 29645 F 50 88.00 1279 reject_low 6 ALIGNMENT 0 YS2-3d23.q1k chr09 228 261 24149 24148 F 34 0.00 1279 reject_low 5 ALIGNMENT 302 YS2-3d24.p1k chr03 916 158 314038 314796 C 759 80.50 1077 reject_low 4 ALIGNMENT 516 YS2-3d24.p1k chr14 44 1046 16215 17217 F 1003 84.35 1077 reject_low 1 ALIGNMENT 495 YS2-3d24.p1k chr06 44 1058 14399 15413 F 1015 83.55 1077 reject_low 3 ALIGNMENT 0 YS2-3d24.p1k chr03 157 62 314797 314796 C 96 0.00 1077 reject_low 4 ALIGNMENT 947 YS2-3d24.p1k chr10 1077 38 727054 728095 C 1040 97.69 1077 accept 0 ALIGNMENT 513 YS2-3d24.p1k chr04 44 1046 17671 18673 F 1003 84.35 1077 reject_low 2 ALIGNMENT 766 YS2-3d24.q1k chr10 33 951 725039 725953 F 919 96.08 1310 accept 0 ALIGNMENT 0 YS2-3e03.q1k chr07 92 112 481044 481043 F 21 0.00 1365 reject_low 1 ALIGNMENT 880 YS2-3e03.q1k chr16 1140 25 483525 484639 C 1116 93.91 1365 accept 0 ALIGNMENT 836 YS2-3e03.p1k chr16 43 1111 480523 481574 F 1069 93.73 1129 accept 0 ALIGNMENT 479 YS2-3e03.q1k chr07 113 886 481044 481817 F 774 87.60 1365 reject_low 1 ALIGNMENT 915 YS2-3e04.q1k chr16 1072 25 483590 484639 C 1048 96.28 1368 accept 0 ALIGNMENT 975 YS2-3e04.p1k chr16 32 1131 480523 481619 F 1100 97.18 1184 accept 0 ALIGNMENT 497 YS2-3e04.q1k chr07 28 885 480963 481819 F 858 86.36 1368 reject_low 1 ALIGNMENT 871 YS2-3e05.q1k chr14 1068 28 695651 696678 C 1041 96.06 1308 accept 0 ALIGNMENT 903 YS2-3e05.p1k chr14 31 1068 690691 691732 F 1038 96.72 1093 accept 0 ALIGNMENT 302 YS2-3e06.q1k vc_2 1 303 2322 2624 F 303 100.00 1007 reject_vc 6 ALIGNMENT 247 YS2-3e06.q1k vc_7 303 53 4922 5172 C 251 99.60 1007|0,1 reject_low 8 ALIGNMENT 548 YS2-3e06.q1k vc_7 728 1 1855 2569 C 728 93.27 1007 reject_vc 2 ALIGNMENT 150 YS2-3e06.p1k chr04 192 30 1439289 1439451 C 163 99.39 209 accept 0 ALIGNMENT 0 YS2-3e06.q1k vc_7 304 304 4700 4921 C 1 0.00 1007 reject_low 8 ALIGNMENT 0 YS2-3e06.p1k chr04 209 193 1439290 1439289 C 17 0.00 209 accept 0 ALIGNMENT 0 YS2-3e06.q1k vc_7 53 54 5172 6360 C 0 0.00 1007 reject_low 8 ALIGNMENT 0 YS2-3e06.q1k vc_4 305 307 1615 1878 F 3 0.00 1007 reject_vc 4 ALIGNMENT 0 YS2-3e06.q1k vc_4 62 237 1548 1547 F 176 0.00 1007 reject_vc 4 ALIGNMENT 302 YS2-3e06.q1k vc_3 1 303 2689 2991 F 303 100.00 1007 reject_vc 7 ALIGNMENT 0 YS2-3e06.q1k vc_4 237 62 6340 6339 C 176 0.00 1007 reject_low 10 ALIGNMENT 551 YS2-3e06.q1k vc_5 1 756 2556 3299 F 756 92.33 1007 reject_vc 1 ALIGNMENT 51 YS2-3e06.q1k vc_7 54 3 6360 6411 C 52 100.00 1007|1,0 reject_low 8 ALIGNMENT 410 YS2-3e06.q1k vc_4 421 1 5232 5654 C 421 99.29 1007 reject_vc 3 ALIGNMENT 302 YS2-3e06.q1k vc_1 1 303 2689 2991 F 303 100.00 1007 reject_vc 5 ALIGNMENT 239 YS2-3e06.q1k vc_4 308 756 1879 2315 F 449 86.86 1007 reject_vc 4 ALIGNMENT 65 YS2-3e06.q1k vc_4 304 238 46 112 C 67 100.00 1007 reject_low 9 ALIGNMENT 112 YS2-3e06.q1k vc_7 421 305 4583 4699 C 117 99.15 1007 reject_low 8 ALIGNMENT 65 YS2-3e06.q1k vc_4 238 304 1548 1614 F 67 100.00 1007 reject_vc 4 ALIGNMENT 65 YS2-3e06.q1k vc_4 304 238 6273 6339 C 67 100.00 1007 reject_low 10 ALIGNMENT 0 YS2-3e06.q1k vc_4 237 62 113 112 C 176 0.00 1007 reject_low 9 ALIGNMENT 929 YS2-3e08.q1k chr14 1129 29 718831 719930 C 1101 95.82 1338 accept 0 ALIGNMENT 402 YS2-3e08.p1k chr14 133 700 714866 715418 F 568 92.43 1264 accept 0 ALIGNMENT 859 YS2-3e09.q1k chr04 29 1111 1393959 1395025 F 1083 94.74 1354 accept 0 ALIGNMENT 907 YS2-3e09.p1k chr04 1085 23 1396470 1397536 C 1063 96.33 1130 accept 0 ALIGNMENT 0 YS2-3e10.q1k chr12 62 865 732081 732080 F 804 0.00 1323 reject_low 2 ALIGNMENT 68 YS2-3e10.q1k chr12 986 864 592513 592634 C 123 86.99 1323 reject_low 3 ALIGNMENT 884 YS2-3e10.q1k chr10 29 1128 616985 618097 F 1100 95.27 1323 accept_chi 0 ALIGNMENT 0 YS2-3e10.q1k chr12 863 62 592635 592634 C 802 0.00 1323 reject_low 3 ALIGNMENT 69 YS2-3e10.q1k chr12 866 986 732081 732200 F 121 87.60 1323 reject_low 2 ALIGNMENT 764 YS2-3e10.p1k chr12 32 1001 1033796 1034787 F 970 93.61 1099 accept_chi 1 ALIGNMENT 871 YS2-3e12.q1k chr15 32 1119 209628 210700 F 1088 95.04 1390 accept 0 ALIGNMENT 917 YS2-3e12.p1k chr15 1161 31 211117 212248 C 1131 94.43 1206 accept 0 ALIGNMENT 501 YS2-3e13.p1k chr04 80 746 1369667 1370348 F 667 91.90 1056 accept 0 ALIGNMENT 760 YS2-3e13.q1k chr04 945 33 1373220 1374118 C 913 96.17 1399 accept 0 ALIGNMENT 855 YS2-3e14.q1k chr12 1133 33 195072 196178 C 1101 94.10 1361 accept 0 ALIGNMENT 902 YS2-3e14.p1k chr12 31 1179 194806 195973 F 1149 94.17 1179 accept 0 ALIGNMENT 351 YS2-3e15.p1k chr12 607 160 194853 195299 C 448 94.87 1019 accept 0 ALIGNMENT 816 YS2-3e15.q1k chr12 28 1078 191121 192156 F 1051 94.58 1258 accept 0 ALIGNMENT 908 YS2-3e16.p1k chr16 34 1139 147845 148945 F 1106 95.39 1231 accept 0 ALIGNMENT 942 YS2-3e16.q1k chr16 1144 29 148247 149365 C 1116 95.61 1277 accept 0 ALIGNMENT 534 YS2-3e17.q1k chr02 28 701 737790 738461 F 674 93.92 1275 accept 0 ALIGNMENT 963 YS2-3e17.p1k chr02 1097 32 742422 743489 C 1066 97.56 1098 accept 0 ALIGNMENT 986 YS2-3e18.q1k chr08 27 1182 415485 416642 F 1156 96.02 1286 accept 0 ALIGNMENT 785 YS2-3e19.q1k chr13 987 38 35979 36921 C 950 95.47 1311 accept 0 ALIGNMENT 280 YS2-3e19.p1k chr13 169 577 31425 31816 F 409 92.18 1016 accept 0 ALIGNMENT 862 YS2-3e20.q1k chr15 26 1102 847868 848928 F 1077 95.36 1377 accept 0 ALIGNMENT 200 YS2-3e21.p1k chr12 470 132 241833 242177 C 339 87.32 1138 accept 0 ALIGNMENT 837 YS2-3e22.q1k chr05 1046 31 124233 125234 C 1016 95.87 1321 accept 0 ALIGNMENT 987 YS2-3e22.p1k chr05 26 1106 120860 121939 F 1081 98.15 1110 accept 0 ALIGNMENT 802 YS2-3e23.q1k chr12 31 982 238168 239105 F 952 96.64 1227 accept 0 ALIGNMENT 581 YS2-3e23.p1k chr12 877 28 241356 242197 C 850 90.24 1013 accept 0 ALIGNMENT 0 YS2-3e24.q1k chr13 62 685 238330 238329 F 624 0.00 1257 reject_low 1 ALIGNMENT 24 YS2-3e24.q1k chr13 686 729 238330 238373 F 44 97.73 1257 reject_low 1 ALIGNMENT 0 YS2-3e24.q1k chr16 686 62 650521 650520 C 625 0.00 1257 reject_low 4 ALIGNMENT 0 YS2-3e24.q1k chr13 686 62 587701 587700 C 625 0.00 1257 reject_low 3 ALIGNMENT 22 YS2-3e24.q1k chr09 686 731 105767 105812 F 46 95.65 1257 reject_low 2 ALIGNMENT 0 YS2-3e24.q1k chr13 686 62 587668 587667 C 625 0.00 1257 reject_low 5 ALIGNMENT 847 YS2-3e24.q1k chr13 970 27 668017 668960 C 944 97.25 1257 accept 0 ALIGNMENT 20 YS2-3e24.q1k chr16 731 687 650476 650520 C 45 95.56 1257 reject_low 4 ALIGNMENT 20 YS2-3e24.q1k chr13 731 687 587656 587700 C 45 95.56 1257 reject_low 3 ALIGNMENT 861 YS2-3e24.p1k chr13 28 1083 667201 668226 F 1056 95.64 1138 accept 0 ALIGNMENT 0 YS2-3e24.q1k chr09 62 685 105767 105766 F 624 0.00 1257 reject_low 2 ALIGNMENT 20 YS2-3e24.q1k chr13 725 687 587629 587667 C 39 97.44 1257 reject_low 5 ALIGNMENT 20 YS2-3f01.q1k chr08 110 73 75965 76001 C 38 97.37 1431 reject_low 2 ALIGNMENT 963 YS2-3f01.p1k chr12 1102 31 558917 559988 C 1072 96.83 1136 reject_bad_break 0 ALIGNMENT 107 YS2-3f01.q1k chr12 81 322 556471 556707 F 242 83.88 1431 reject_bad_break 0 ALIGNMENT 29 YS2-3f01.q1k chr12 28 80 556440 556494 F 53 88.68 1431 reject_bad_break 0 ALIGNMENT 0 YS2-3f01.q1k chr12 81 80 556495 556470 F 0 0.00 1431 reject_bad_break 0 ALIGNMENT 21 YS2-3f01.q1k chr13 75 110 239354 239389 F 36 97.22 1431 reject_low 1 ALIGNMENT 389 YS2-3f04.p1k chr11 563 29 3624 4173 C 535 91.78 847 ambiguous_tel 1 ALIGNMENT 888 YS2-3f04.q1k chr07 27 1174 2699 3841 F 1148 94.16 1454 accept 0 ALIGNMENT 898 YS2-3f06.q1k chr14 1086 37 489429 490493 C 1050 96.29 1350 accept 0 ALIGNMENT 1020 YS2-3f06.p1k chr14 30 1200 487513 488685 F 1171 95.73 1201 accept 0 ALIGNMENT 804 YS2-3f07.q1k chr14 28 1013 711030 712028 F 986 95.03 1322 accept 0 ALIGNMENT 947 YS2-3f07.p1k chr14 1202 27 712832 714006 C 1176 95.07 1217 accept 0 ALIGNMENT 483 YS2-3f08.p1k chr14 96 722 714864 715507 F 627 92.98 1073 accept 0 ALIGNMENT 927 YS2-3f08.q1k chr14 1150 26 718798 719930 C 1125 95.47 1335 accept 0 ALIGNMENT 43 YS2-3f09.q1k vc_7 419 311 4587 4695 C 109 82.57 797 reject_low 11 ALIGNMENT 294 YS2-3f09.p1k vc_1 445 1 1301 1749 C 445 89.21 451 reject_low 2 ALIGNMENT 221 YS2-3f09.q1k vc_7 303 53 4923 5172 C 251 96.41 797|0,1 reject_low 11 ALIGNMENT 309 YS2-3f09.q1k vc_4 419 1 5236 5654 C 419 92.36 797 reject_low 7 ALIGNMENT 275 YS2-3f09.q1k vc_2 1 303 2322 2623 F 303 97.36 797 reject_low 9 ALIGNMENT 352 YS2-3f09.q1k vc_7 539 1 2036 2569 C 539 89.80 797 reject_vc 1 ALIGNMENT 294 YS2-3f09.p1k vc_3 445 1 1301 1749 C 445 89.21 451 reject_low 4 ALIGNMENT 0 YS2-3f09.q1k vc_7 53 54 5172 6360 C 0 0.00 797 reject_low 11 ALIGNMENT 0 YS2-3f09.q1k vc_7 310 304 4696 4922 C 7 0.00 797 reject_low 11 ALIGNMENT 275 YS2-3f09.q1k vc_1 1 303 2689 2990 F 303 97.36 797 reject_low 8 ALIGNMENT 288 YS2-3f09.p1k vc_7 1 445 456 904 F 445 88.99 451 reject_vc 1 ALIGNMENT 294 YS2-3f09.p1k vc_6 1 445 3712 4160 F 445 89.44 451 reject_low 5 ALIGNMENT 294 YS2-3f09.p1k vc_5 445 1 4221 4669 C 445 89.21 451 reject_vc 0 ALIGNMENT 0 YS2-3f09.q1k vc_4 304 310 1613 1879 F 7 0.00 797 reject_low 12 ALIGNMENT 275 YS2-3f09.q1k vc_3 1 303 2689 2990 F 303 97.36 797 reject_low 10 ALIGNMENT 288 YS2-3f09.p1k vc_7 1 445 13918 14366 F 445 88.99 451 reject_low 6 ALIGNMENT 294 YS2-3f09.p1k vc_2 445 1 1301 1749 C 445 89.21 451 reject_low 3 ALIGNMENT 51 YS2-3f09.q1k vc_7 54 3 6360 6411 C 52 100.00 797|1,0 reject_low 11 ALIGNMENT 78 YS2-3f09.q1k vc_4 311 539 1880 2105 F 229 80.35 797 reject_low 12 ALIGNMENT 55 YS2-3f09.q1k vc_4 303 239 6275 6339 C 65 95.38 797 reject_low 14 ALIGNMENT 352 YS2-3f09.q1k vc_5 1 539 2556 3089 F 539 89.61 797 reject_vc 0 ALIGNMENT 55 YS2-3f09.q1k vc_4 239 303 1548 1612 F 65 95.38 797 reject_low 12 ALIGNMENT 55 YS2-3f09.q1k vc_4 303 239 48 112 C 65 95.38 797 reject_low 13 ALIGNMENT 0 YS2-3f10.q1k chr02 776 630 347602 347601 C 147 0.00 1345 reject_low 5 ALIGNMENT 90 YS2-3f10.q1k chr14 537 630 726126 726219 F 94 98.94 1345 reject_low 2 ALIGNMENT 989 YS2-3f10.p1k chr10 1220 29 425093 426272 C 1192 95.55 1228 accept 0 ALIGNMENT 0 YS2-3f10.q1k chr14 62 536 726126 726125 F 475 0.00 1345 reject_low 2 ALIGNMENT 88 YS2-3f10.q1k chr11 631 537 84211 84305 C 95 97.89 1345 reject_low 3 ALIGNMENT 0 YS2-3f10.q1k chr04 545 62 519823 519822 C 484 0.00 1345 reject_low 6 ALIGNMENT 0 YS2-3f10.q1k chr12 62 536 962959 962958 F 475 0.00 1345 reject_low 4 ALIGNMENT 0 YS2-3f10.q1k chr11 776 632 84212 84211 C 145 0.00 1345 reject_low 3 ALIGNMENT 0 YS2-3f10.q1k chr04 776 630 519740 519739 C 147 0.00 1345 reject_low 6 ALIGNMENT 0 YS2-3f10.q1k chr16 288 62 212845 212844 C 227 0.00 1345 reject_low 7 ALIGNMENT 0 YS2-3f10.q1k chr11 536 62 84306 84305 C 475 0.00 1345 reject_low 3 ALIGNMENT 0 YS2-3f10.q1k chr14 631 776 726219 726218 F 146 0.00 1345 reject_low 2 ALIGNMENT 90 YS2-3f10.q1k chr02 630 537 9582 9675 C 94 98.94 1345 reject_low 1 ALIGNMENT 80 YS2-3f10.q1k chr04 629 546 519739 519822 C 84 98.81 1345 reject_low 6 ALIGNMENT 20 YS2-3f10.q1k chr16 319 289 212814 212844 C 31 96.77 1345 reject_low 7 ALIGNMENT 0 YS2-3f10.q1k chr02 536 62 9676 9675 C 475 0.00 1345 reject_low 1 ALIGNMENT 0 YS2-3f10.q1k chr12 630 776 963051 963050 F 147 0.00 1345 reject_low 4 ALIGNMENT 837 YS2-3f10.q1k chr10 24 1101 423835 424906 F 1078 93.97 1345 accept 0 ALIGNMENT 0 YS2-3f10.q1k chr16 776 320 212815 212814 C 457 0.00 1345 reject_low 7 ALIGNMENT 83 YS2-3f10.q1k chr02 629 543 347601 347687 C 87 98.85 1345 reject_low 5 ALIGNMENT 0 YS2-3f10.q1k chr02 542 62 347688 347687 C 481 0.00 1345 reject_low 5 ALIGNMENT 0 YS2-3f10.q1k chr02 776 631 9583 9582 C 146 0.00 1345 reject_low 1 ALIGNMENT 89 YS2-3f10.q1k chr12 537 629 962959 963051 F 93 98.92 1345 reject_low 4 ALIGNMENT 868 YS2-3f11.p1k chr04 29 1089 1131895 1132968 F 1061 95.48 1180 accept 0 ALIGNMENT 895 YS2-3f11.q1k chr04 1120 26 1136042 1137121 C 1095 96.16 1340 accept 0 ALIGNMENT 951 YS2-3f12.q1k chr14 1223 34 475948 477129 C 1190 95.13 1396 accept 0 ALIGNMENT 892 YS2-3f12.p1k chr14 33 1157 472112 473239 F 1125 93.16 1164 accept 0 ALIGNMENT 385 YS2-3f13.p1k chr13 552 43 443696 444215 C 510 92.75 872 accept 0 ALIGNMENT 904 YS2-3f13.q1k chr13 29 1161 439414 440531 F 1133 95.41 1363 accept 0 ALIGNMENT 917 YS2-3f14.p1k chr10 29 1124 235248 236357 F 1096 94.89 1156 accept 0 ALIGNMENT 778 YS2-3f14.q1k chr10 966 27 236183 237106 C 940 95.64 1420 accept 0 ALIGNMENT 40 YS2-3f15.q1k vc_5 419 373 5025 5071 C 47 95.74 419 reject_low 8 ALIGNMENT 179 YS2-3f15.p1k vc_7 1 411 13918 14337 F 411 83.21 437 reject_vc 6 ALIGNMENT 185 YS2-3f15.p1k vc_1 411 1 1330 1749 C 411 83.70 437 reject_vc 1 ALIGNMENT 0 YS2-3f15.q1k chr09 379 419 125151 125150 F 41 0.00 419 accept 0 ALIGNMENT 0 YS2-3f15.q1k vc_2 378 62 2146 2145 C 317 0.00 419 reject_low 10 ALIGNMENT 0 YS2-3f15.q1k vc_5 372 62 5072 5071 C 311 0.00 419 reject_low 8 ALIGNMENT 0 YS2-3f15.q1k vc_7 62 381 13525 13524 F 320 0.00 419 reject_low 14 ALIGNMENT 0 YS2-3f15.q1k vc_4 62 378 5831 5830 F 317 0.00 419 reject_low 12 ALIGNMENT 179 YS2-3f15.p1k vc_7 1 411 456 875 F 411 83.21 437 reject_vc 5 ALIGNMENT 38 YS2-3f15.q1k vc_5 416 373 1 44 C 44 95.45 419 reject_low 13 ALIGNMENT 185 YS2-3f15.p1k vc_3 411 1 1330 1749 C 411 83.70 437 reject_vc 3 ALIGNMENT 185 YS2-3f15.p1k vc_5 411 1 4250 4669 C 411 83.70 437 reject_vc 4 ALIGNMENT 185 YS2-3f15.p1k vc_2 411 1 1330 1749 C 411 83.70 437 reject_vc 2 ALIGNMENT 0 YS2-3f15.q1k vc_1 378 62 2513 2512 C 317 0.00 419 reject_low 9 ALIGNMENT 41 YS2-3f15.q1k vc_2 419 379 2105 2145 C 41 100.00 419 reject_low 10 ALIGNMENT 38 YS2-3f15.q1k vc_7 382 419 13525 13562 F 38 100.00 419 reject_low 14 ALIGNMENT 0 YS2-3f15.q1k vc_3 378 62 2513 2512 C 317 0.00 419 reject_low 11 ALIGNMENT 0 YS2-3f15.q1k vc_5 372 62 45 44 C 311 0.00 419 reject_low 13 ALIGNMENT 183 YS2-3f15.p1k vc_6 1 335 3712 4047 F 335 85.97 437 reject_vc 7 ALIGNMENT 41 YS2-3f15.q1k vc_3 419 379 2472 2512 C 41 100.00 419 reject_low 11 ALIGNMENT 41 YS2-3f15.q1k vc_1 419 379 2472 2512 C 41 100.00 419 reject_low 9 ALIGNMENT 337 YS2-3f15.q1k chr09 33 378 124806 125151 F 346 99.42 419 accept 0 ALIGNMENT 41 YS2-3f15.q1k vc_4 379 419 5831 5871 F 41 100.00 419 reject_low 12 ALIGNMENT 257 YS2-3f17.p1k chr11 31 304 269611 269885 F 274 98.54 321 accept 0 ALIGNMENT 0 YS2-3f17.p1k chr11 305 321 269885 269884 F 17 0.00 321 accept 0 ALIGNMENT 878 YS2-3f19.q1k chr15 1114 34 440800 441860 C 1081 95.65 1371 accept 0 ALIGNMENT 0 YS2-3f20.q1k vc_7 62 658 63 62 F 597 0.00 1344 reject_low 16 ALIGNMENT 0 YS2-3f20.q1k vc_3 62 695 2531 2530 F 634 0.00 1344 reject_low 7 ALIGNMENT 0 YS2-3f20.q1k vc_7 906 907 5172 6360 C 0 0.00 1344 reject_low 14 ALIGNMENT 46 YS2-3f20.q1k vc_7 907 856 6360 6411 C 52 96.15 1344|1,0 reject_low 14 ALIGNMENT 40 YS2-3f20.q1k vc_2 696 657 2105 2144 C 40 100.00 1344 reject_low 12 ALIGNMENT 0 YS2-3f20.q1k vc_1 62 695 2531 2530 F 634 0.00 1344 reject_low 5 ALIGNMENT 0 YS2-3f20.q1k vc_7 855 62 6412 6411 C 794 0.00 1344 reject_low 14 ALIGNMENT 0 YS2-3f20.p1k chr10 653 670 107801 107800 F 18 0.00 670 accept_chi 0 ALIGNMENT 87 YS2-3f20.q1k vc_4 784 696 1446 1534 C 89 100.00 1344 reject_low 10 ALIGNMENT 76 YS2-3f20.q1k vc_7 1122 906 4955 5172 C 217 80.18 1344|0,1 reject_low 14 ALIGNMENT 0 YS2-3f20.q1k vc_5 657 62 37 36 C 596 0.00 1344 reject_low 18 ALIGNMENT 38 YS2-3f20.q1k vc_7 659 696 13525 13562 F 38 100.00 1344 reject_low 17 ALIGNMENT 0 YS2-3f20.q1k vc_1 773 697 2473 2472 C 77 0.00 1344 reject_low 11 ALIGNMENT 0 YS2-3f20.q1k vc_4 695 62 1535 1534 C 634 0.00 1344 reject_low 10 ALIGNMENT 159 YS2-3f20.q1k vc_4 696 857 6353 6514 F 162 100.00 1344|1,0 reject_low 9 ALIGNMENT 0 YS2-3f20.q1k vc_2 62 695 2164 2163 F 634 0.00 1344 reject_low 6 ALIGNMENT 279 YS2-3f20.q1k vc_4 1211 696 5292 5812 C 516 86.24 1344 reject_low 4 ALIGNMENT 36 YS2-3f20.q1k vc_5 693 658 1 36 C 36 100.00 1344 reject_low 18 ALIGNMENT 0 YS2-3f20.q1k vc_4 697 696 5872 6353 F 0 0.00 1344 reject_low 9 ALIGNMENT 38 YS2-3f20.q1k vc_7 659 696 63 100 F 38 100.00 1344 reject_low 16 ALIGNMENT 286 YS2-3f20.q1k vc_5 696 1211 2398 2916 F 516 86.05 1344 reject_low 2 ALIGNMENT 40 YS2-3f20.q1k vc_1 696 657 2472 2511 C 40 100.00 1344 reject_low 11 ALIGNMENT 281 YS2-3f20.q1k vc_1 696 1122 2531 2958 F 427 89.70 1344 reject_low 5 ALIGNMENT 286 YS2-3f20.q1k vc_7 1211 696 2209 2727 C 516 86.63 1344 reject_low 3 ALIGNMENT 0 YS2-3f20.q1k vc_2 656 62 2145 2144 C 595 0.00 1344 reject_low 12 ALIGNMENT 0 YS2-3f20.q1k vc_7 62 658 13525 13524 F 597 0.00 1344 reject_low 17 ALIGNMENT 585 YS2-3f20.p1k chr10 32 652 107181 107801 F 621 98.55 670 accept_chi 0 ALIGNMENT 40 YS2-3f20.q1k vc_4 657 696 5832 5871 F 40 100.00 1344 reject_low 9 ALIGNMENT 0 YS2-3f20.q1k vc_2 773 697 2106 2105 C 77 0.00 1344 reject_low 12 ALIGNMENT 0 YS2-3f20.q1k vc_1 656 62 2512 2511 C 595 0.00 1344 reject_low 11 ALIGNMENT 0 YS2-3f20.q1k vc_5 773 697 5026 5025 C 77 0.00 1344 reject_low 15 ALIGNMENT 0 YS2-3f20.q1k vc_7 697 773 13562 13561 F 77 0.00 1344 reject_low 17 ALIGNMENT 40 YS2-3f20.q1k vc_3 696 657 2472 2511 C 40 100.00 1344 reject_low 13 ALIGNMENT 0 YS2-3f20.q1k vc_3 773 697 2473 2472 C 77 0.00 1344 reject_low 13 ALIGNMENT 0 YS2-3f20.q1k vc_5 62 695 2398 2397 F 634 0.00 1344 reject_low 2 ALIGNMENT 281 YS2-3f20.q1k vc_3 696 1122 2531 2958 F 427 89.70 1344 reject_low 7 ALIGNMENT 0 YS2-3f20.q1k vc_4 62 695 126 125 F 634 0.00 1344 reject_low 8 ALIGNMENT 0 YS2-3f20.q1k vc_3 656 62 2512 2511 C 595 0.00 1344 reject_low 13 ALIGNMENT 39 YS2-3f20.q1k vc_5 696 658 5025 5063 C 39 100.00 1344 reject_low 15 ALIGNMENT 581 YS2-3f20.q1k chr10 656 33 107178 107801 C 624 98.24 1344 accept_chi 1 ALIGNMENT 159 YS2-3f20.q1k vc_4 696 857 126 287 F 162 100.00 1344 reject_low 8 ALIGNMENT 0 YS2-3f20.q1k vc_4 62 656 5832 5831 F 595 0.00 1344 reject_low 9 ALIGNMENT 0 YS2-3f20.q1k vc_5 773 694 2 1 C 80 0.00 1344 reject_low 18 ALIGNMENT 0 YS2-3f20.q1k vc_7 695 62 2728 2727 C 634 0.00 1344 reject_low 3 ALIGNMENT 281 YS2-3f20.q1k vc_2 696 1122 2164 2591 F 427 89.70 1344 reject_low 6 ALIGNMENT 0 YS2-3f20.q1k vc_5 657 62 5064 5063 C 596 0.00 1344 reject_low 15 ALIGNMENT 0 YS2-3f20.q1k chr10 773 657 107179 107178 C 117 0.00 1344 accept_chi 1 ALIGNMENT 0 YS2-3f20.q1k vc_4 695 62 5813 5812 C 634 0.00 1344 reject_low 4 ALIGNMENT 0 YS2-3f20.q1k vc_7 697 773 100 99 F 77 0.00 1344 reject_low 16 ALIGNMENT 940 YS2-3f21.q1k chr12 1226 34 75396 76594 C 1193 94.22 1270 accept 0 ALIGNMENT 909 YS2-3f23.p1k chr07 1080 32 899460 900503 C 1049 97.14 1082 accept 0 ALIGNMENT 806 YS2-3f23.q1k chr07 35 987 897195 898135 F 953 97.06 1315 accept 0 ALIGNMENT 471 YS2-3f24.q1k chr02 43 579 663610 664146 F 537 96.46 1363 accept 0 ALIGNMENT 900 YS2-3f24.p1k chr02 1069 29 663953 664974 C 1041 97.21 1075 accept 0 ALIGNMENT 0 YS2-3g02.q1k vc_4 62 704 5830 5829 F 643 0.00 1333 reject_low 9 ALIGNMENT 0 YS2-3g02.q1k vc_1 62 746 2532 2531 F 685 0.00 1333 reject_low 2 ALIGNMENT 0 YS2-3g02.q1k vc_3 704 62 2514 2513 C 643 0.00 1333 reject_low 13 ALIGNMENT 0 YS2-3g02.q1k vc_2 704 62 2147 2146 C 643 0.00 1333 reject_low 12 ALIGNMENT 0 YS2-3g02.q1k vc_2 62 746 2165 2164 F 685 0.00 1333 reject_low 3 ALIGNMENT 667 YS2-3g02.p1k chr12 28 712 805564 806248 F 685 100.00 727 accept_chi 0 ALIGNMENT 68 YS2-3g02.q1k vc_4 830 747 1448 1533 C 84 95.24 1333 reject_low 10 ALIGNMENT 37 YS2-3g02.q1k vc_5 744 708 5027 5063 C 37 100.00 1333 reject_low 14 ALIGNMENT 40 YS2-3g02.q1k vc_3 744 705 2474 2513 C 40 100.00 1333 reject_low 13 ALIGNMENT 0 YS2-3g02.q1k vc_1 704 62 2514 2513 C 643 0.00 1333 reject_low 11 ALIGNMENT 0 YS2-3g02.p1k chr12 713 727 806248 806247 F 15 0.00 727 accept_chi 0 ALIGNMENT 102 YS2-3g02.q1k vc_4 949 747 5617 5811 C 203 87.19 1333 reject_low 5 ALIGNMENT 0 YS2-3g02.q1k vc_4 745 746 5870 6353 F 2 0.00 1333 reject_low 9 ALIGNMENT 102 YS2-3g02.q1k vc_2 747 949 2165 2359 F 203 87.19 1333 reject_low 3 ALIGNMENT 40 YS2-3g02.q1k vc_1 744 705 2474 2513 C 40 100.00 1333 reject_low 11 ALIGNMENT 0 YS2-3g02.q1k vc_5 707 62 37 36 C 646 0.00 1333 reject_low 16 ALIGNMENT 645 YS2-3g02.q1k chr12 707 24 805564 806247 C 684 99.12 1333 accept_chi 1 ALIGNMENT 40 YS2-3g02.q1k vc_2 744 705 2107 2146 C 40 100.00 1333 reject_low 12 ALIGNMENT 102 YS2-3g02.q1k vc_3 747 949 2532 2726 F 203 87.19 1333 reject_low 4 ALIGNMENT 97 YS2-3g02.q1k vc_4 747 891 127 269 F 145 91.72 1333 reject_low 8 ALIGNMENT 40 YS2-3g02.q1k vc_4 705 744 5830 5869 F 40 100.00 1333 reject_low 9 ALIGNMENT 0 YS2-3g02.q1k vc_4 62 746 127 126 F 685 0.00 1333 reject_low 8 ALIGNMENT 0 YS2-3g02.q1k vc_5 62 746 2399 2398 F 685 0.00 1333 reject_low 6 ALIGNMENT 0 YS2-3g02.q1k vc_7 746 62 2727 2726 C 685 0.00 1333 reject_low 7 ALIGNMENT 0 YS2-3g02.q1k vc_4 746 62 5812 5811 C 685 0.00 1333 reject_low 5 ALIGNMENT 0 YS2-3g02.q1k vc_3 62 746 2532 2531 F 685 0.00 1333 reject_low 4 ALIGNMENT 36 YS2-3g02.q1k vc_5 743 708 1 36 C 36 100.00 1333 reject_low 16 ALIGNMENT 102 YS2-3g02.q1k vc_7 949 747 2532 2726 C 203 87.19 1333 reject_low 7 ALIGNMENT 0 YS2-3g02.q1k vc_5 707 62 5064 5063 C 646 0.00 1333 reject_low 14 ALIGNMENT 97 YS2-3g02.q1k vc_4 747 891 6354 6496 F 145 91.72 1333 reject_low 9 ALIGNMENT 102 YS2-3g02.q1k vc_5 747 949 2399 2593 F 203 87.19 1333 reject_low 6 ALIGNMENT 36 YS2-3g02.q1k vc_7 709 744 13525 13560 F 36 100.00 1333 reject_low 15 ALIGNMENT 0 YS2-3g02.q1k vc_7 62 708 13525 13524 F 647 0.00 1333 reject_low 15 ALIGNMENT 0 YS2-3g02.q1k vc_4 746 62 1534 1533 C 685 0.00 1333 reject_low 10 ALIGNMENT 102 YS2-3g02.q1k vc_1 747 949 2532 2726 F 203 87.19 1333 reject_low 2 ALIGNMENT 943 YS2-3g03.p1k chr14 37 1141 152890 153994 F 1105 96.38 1142 accept 0 ALIGNMENT 824 YS2-3g03.q1k chr14 1116 27 155844 156928 C 1090 93.39 1288 accept 0 ALIGNMENT 52 YS2-3g04.q1k chr02 510 634 258686 258810 F 125 83.20 1367 reject_low 30 ALIGNMENT 0 YS2-3g04.q1k chr03 62 495 124138 124137 F 434 0.00 1367 reject_low 27 ALIGNMENT 105 YS2-3g04.q1k chr12 504 703 215096 215302 F 200 87.50 1367 reject_low 26 ALIGNMENT 0 YS2-3g04.q1k chr03 487 62 149808 149807 C 426 0.00 1367 reject_low 1 ALIGNMENT 120 YS2-3g04.q1k chr02 703 504 265277 265477 C 200 89.50 1367 reject_low 15 ALIGNMENT 0 YS2-3g04.q1k chr01 62 495 160246 160245 F 434 0.00 1367 reject_low 3 ALIGNMENT 20 YS2-3g04.q1k chr11 488 447 517176 517217 C 42 83.33 1367 reject_low 21 ALIGNMENT 29 YS2-3g04.q1k chr15 742 809 227340 227407 F 68 83.82 1367 reject_low 24 ALIGNMENT 0 YS2-3g04.q1k chr11 700 489 517177 517176 C 212 0.00 1367 reject_low 21 ALIGNMENT 114 YS2-3g04.q1k chr02 703 510 221156 221352 C 194 89.18 1367 reject_low 23 ALIGNMENT 0 YS2-3g04.q1k chr02 503 62 259893 259892 C 442 0.00 1367 reject_low 14 ALIGNMENT 120 YS2-3g04.q1k chr07 703 496 931807 932015 C 208 88.46 1367 reject_low 13 ALIGNMENT 0 YS2-3g04.q1k chr07 489 700 535465 535464 F 212 0.00 1367 reject_low 20 ALIGNMENT 26 YS2-3g04.q1k chr09 662 703 197328 197370 F 42 92.86 1367 reject_low 31 ALIGNMENT 123 YS2-3g04.q1k chr13 703 504 184286 184486 C 200 90.00 1367 reject_low 10 ALIGNMENT 109 YS2-3g04.q1k chr10 703 492 540795 541006 C 212 86.79 1367 reject_low 22 ALIGNMENT 0 YS2-3g04.q1k chr02 62 446 221249 221248 F 385 0.00 1367 reject_low 18 ALIGNMENT 120 YS2-3g04.q1k chr02 703 504 259692 259892 C 200 89.50 1367 reject_low 14 ALIGNMENT 0 YS2-3g04.q1k chr09 62 495 197143 197142 F 434 0.00 1367 reject_low 31 ALIGNMENT 0 YS2-3g04.q1k chr10 491 62 541007 541006 C 430 0.00 1367 reject_low 22 ALIGNMENT 0 YS2-3g04.q1k chr02 489 700 226874 226873 F 212 0.00 1367 reject_low 19 ALIGNMENT 0 YS2-3g04.q1k chr15 62 741 227340 227339 F 680 0.00 1367 reject_low 24 ALIGNMENT 123 YS2-3g04.q1k chr14 496 703 96617 96825 F 208 88.94 1367 reject_low 8 ALIGNMENT 0 YS2-3g04.q1k chr02 509 62 226935 226934 C 448 0.00 1367 reject_low 16 ALIGNMENT 108 YS2-3g04.q1k chr01 496 795 160246 160556 F 300 81.67 1367 reject_low 3 ALIGNMENT 0 YS2-3g04.q1k chr02 489 700 221290 221289 F 212 0.00 1367 reject_low 18 ALIGNMENT 0 YS2-3g04.q1k chr01 62 495 165834 165833 F 434 0.00 1367 reject_low 4 ALIGNMENT 0 YS2-3g04.q1k chr08 62 503 543625 543624 F 442 0.00 1367 reject_low 9 ALIGNMENT 117 YS2-3g04.q1k chr05 486 795 443390 443710 F 310 82.26 1367 reject_low 2 ALIGNMENT 0 YS2-3g04.q1k chr14 62 495 96617 96616 F 434 0.00 1367 reject_low 8 ALIGNMENT 0 YS2-3g04.q1k chr15 700 612 227809 227808 C 89 0.00 1367 reject_low 29 ALIGNMENT 108 YS2-3g04.q1k chr01 496 795 165834 166144 F 300 81.67 1367 reject_low 4 ALIGNMENT 92 YS2-3g04.q1k chr09 496 658 197143 197307 F 163 88.34 1367 reject_low 31 ALIGNMENT 0 YS2-3g04.q1k chr02 509 62 221353 221352 C 448 0.00 1367 reject_low 23 ALIGNMENT 20 YS2-3g04.q1k chr02 447 488 221249 221290 F 42 83.33 1367 reject_low 18 ALIGNMENT 0 YS2-3g04.q1k chr11 62 509 517116 517115 F 448 0.00 1367 reject_low 17 ALIGNMENT 129 YS2-3g04.q1k chr16 703 496 560594 560802 C 208 89.90 1367 reject_low 7 ALIGNMENT 22 YS2-3g04.q1k chr15 611 575 227808 227844 C 37 86.49 1367 reject_low 29 ALIGNMENT 71 YS2-3g04.q1k chr03 546 703 142803 142961 F 158 84.81 1367 reject_low 28 ALIGNMENT 869 YS2-3g04.q1k chr15 24 1131 227385 228483 F 1108 95.67 1367 accept 0 ALIGNMENT 0 YS2-3g04.q1k chr15 574 484 227845 227935 C 91 0.00 1367 reject_low 29 ALIGNMENT 0 YS2-3g04.q1k chr02 62 446 226833 226832 F 385 0.00 1367 reject_low 19 ALIGNMENT 0 YS2-3g04.q1k chr03 62 545 142803 142802 F 484 0.00 1367 reject_low 28 ALIGNMENT 0 YS2-3g04.q1k chr05 62 485 443390 443389 F 424 0.00 1367 reject_low 2 ALIGNMENT 0 YS2-3g04.q1k chr02 503 62 265478 265477 C 442 0.00 1367 reject_low 15 ALIGNMENT 0 YS2-3g04.q1k chr07 495 62 932016 932015 C 434 0.00 1367 reject_low 13 ALIGNMENT 123 YS2-3g04.q1k chr15 703 504 600519 600719 C 200 90.00 1367 reject_low 12 ALIGNMENT 27 YS2-3g04.q1k chr02 714 758 258877 258921 F 45 88.89 1367 reject_low 30 ALIGNMENT 102 YS2-3g04.q1k chr03 496 703 124138 124346 F 208 85.58 1367 reject_low 27 ALIGNMENT 20 YS2-3g04.q1k chr07 447 488 535424 535465 F 42 83.33 1367 reject_low 20 ALIGNMENT 0 YS2-3g04.q1k chr03 503 62 169525 169524 C 442 0.00 1367 reject_low 25 ALIGNMENT 0 YS2-3g04.q1k chr13 503 62 190069 190068 C 442 0.00 1367 reject_low 11 ALIGNMENT 123 YS2-3g04.q1k chr08 504 703 543625 543825 F 200 90.00 1367 reject_low 9 ALIGNMENT 0 YS2-3g04.q1k chr07 62 446 535424 535423 F 385 0.00 1367 reject_low 20 ALIGNMENT 119 YS2-3g04.q1k chr11 510 703 517116 517310 F 194 89.69 1367 reject_low 17 ALIGNMENT 0 YS2-3g04.q1k chr16 495 62 560803 560802 C 434 0.00 1367 reject_low 7 ALIGNMENT 132 YS2-3g04.q1k chr03 816 488 149479 149807 C 329 83.89 1367 reject_low 1 ALIGNMENT 118 YS2-3g04.q1k chr07 703 488 535331 535547 C 216 87.50 1367 reject_low 6 ALIGNMENT 889 YS2-3g04.p1k chr15 1080 31 229402 230454 C 1050 95.71 1115 accept 0 ALIGNMENT 123 YS2-3g04.q1k chr13 703 504 189868 190068 C 200 90.00 1367 reject_low 11 ALIGNMENT 0 YS2-3g04.q1k chr12 62 503 215096 215095 F 442 0.00 1367 reject_low 26 ALIGNMENT 105 YS2-3g04.q1k chr03 703 504 169318 169524 C 200 87.50 1367 reject_low 25 ALIGNMENT 0 YS2-3g04.q1k chr09 659 661 197308 197327 F 3 0.00 1367 reject_low 31 ALIGNMENT 20 YS2-3g04.q1k chr02 447 488 226833 226874 F 42 83.33 1367 reject_low 19 ALIGNMENT 0 YS2-3g04.q1k chr16 495 62 56782 56781 C 434 0.00 1367 reject_low 5 ALIGNMENT 21 YS2-3g04.q1k chr15 483 447 227936 227972 C 37 86.49 1367 reject_low 29 ALIGNMENT 119 YS2-3g04.q1k chr02 703 510 226740 226934 C 194 89.69 1367 reject_low 16 ALIGNMENT 0 YS2-3g04.q1k chr02 62 509 258686 258685 F 448 0.00 1367 reject_low 30 ALIGNMENT 0 YS2-3g04.q1k chr15 503 62 600720 600719 C 442 0.00 1367 reject_low 12 ALIGNMENT 108 YS2-3g04.q1k chr16 795 496 56471 56781 C 300 82.00 1367 reject_low 5 ALIGNMENT 0 YS2-3g04.q1k chr11 446 62 517218 517217 C 385 0.00 1367 reject_low 21 ALIGNMENT 0 YS2-3g04.q1k chr07 487 62 535548 535547 C 426 0.00 1367 reject_low 6 ALIGNMENT 0 YS2-3g04.q1k chr15 446 62 227973 227972 C 385 0.00 1367 reject_low 29 ALIGNMENT 0 YS2-3g04.q1k chr13 503 62 184487 184486 C 442 0.00 1367 reject_low 10 ALIGNMENT 0 YS2-3g04.q1k chr02 635 713 258811 258876 F 79 0.00 1367 reject_low 30 ALIGNMENT 0 YS2-3g05.q1k vc_2 92 702 2164 2163 F 611 0.00 1312 reject_low 5 ALIGNMENT 0 YS2-3g05.q1k vc_3 661 92 2514 2513 C 570 0.00 1312 reject_low 13 ALIGNMENT 0 YS2-3g05.q1k vc_1 751 704 2473 2472 C 48 0.00 1312 reject_low 11 ALIGNMENT 36 YS2-3g05.q1k vc_5 700 665 1 36 C 36 100.00 1312 reject_low 17 ALIGNMENT 0 YS2-3g05.q1k vc_4 704 703 5872 6353 F 0 0.00 1312 reject_low 9 ALIGNMENT 0 YS2-3g05.q1k vc_7 92 665 13525 13524 F 574 0.00 1312 reject_low 16 ALIGNMENT 0 YS2-3g05.q1k chr01 751 663 172865 172864 C 89 0.00 1312 accept_chi 0 ALIGNMENT 38 YS2-3g05.q1k vc_7 666 703 13525 13562 F 38 100.00 1312 reject_low 16 ALIGNMENT 46 YS2-3g05.q1k vc_7 914 864 6360 6411 C 51 98.04 1312 reject_low 14 ALIGNMENT 144 YS2-3g05.q1k vc_4 703 865 126 287 F 163 96.93 1312 reject_low 8 ALIGNMENT 236 YS2-3g05.q1k vc_7 1065 703 2366 2727 C 363 89.53 1312 reject_low 7 ALIGNMENT 0 YS2-3g05.q1k vc_5 664 92 37 36 C 573 0.00 1312 reject_low 17 ALIGNMENT 42 YS2-3g05.q1k vc_2 703 662 2105 2146 C 42 100.00 1312 reject_low 12 ALIGNMENT 234 YS2-3g05.q1k vc_4 1224 703 5297 5812 C 522 83.52 1312 reject_low 3 ALIGNMENT 0 YS2-3g05.q1k vc_4 702 92 5813 5812 C 611 0.00 1312 reject_low 3 ALIGNMENT 0 YS2-3g05.q1k vc_3 751 704 2473 2472 C 48 0.00 1312 reject_low 13 ALIGNMENT 0 YS2-3g05.q1k vc_5 92 702 2398 2397 F 611 0.00 1312 reject_low 2 ALIGNMENT 0 YS2-3g05.q1k vc_3 92 702 2531 2530 F 611 0.00 1312 reject_low 6 ALIGNMENT 0 YS2-3g05.q1k vc_7 704 751 13562 13561 F 48 0.00 1312 reject_low 16 ALIGNMENT 402 YS2-3g05.p1k chr01 31 447 172864 173280 F 417 99.76 1087 accept_chi 1 ALIGNMENT 241 YS2-3g05.q1k vc_5 703 1224 2398 2911 F 522 83.91 1312 reject_low 2 ALIGNMENT 39 YS2-3g05.q1k vc_5 703 665 5025 5063 C 39 100.00 1312 reject_low 15 ALIGNMENT 580 YS2-3g05.q1k chr01 662 32 172864 173495 C 631 98.10 1312 accept_chi 0 ALIGNMENT 0 YS2-3g05.q1k vc_4 92 702 126 125 F 611 0.00 1312 reject_low 8 ALIGNMENT 236 YS2-3g05.q1k vc_3 703 1065 2531 2892 F 363 89.53 1312 reject_low 6 ALIGNMENT 0 YS2-3g05.q1k vc_4 92 661 5830 5829 F 570 0.00 1312 reject_low 9 ALIGNMENT 144 YS2-3g05.q1k vc_4 703 865 6353 6514 F 163 96.93 1312|1,0 reject_low 9 ALIGNMENT 0 YS2-3g05.q1k vc_7 702 92 2728 2727 C 611 0.00 1312 reject_low 7 ALIGNMENT 0 YS2-3g05.q1k vc_1 661 92 2514 2513 C 570 0.00 1312 reject_low 11 ALIGNMENT 0 YS2-3g05.q1k vc_4 702 92 1535 1534 C 611 0.00 1312 reject_low 10 ALIGNMENT 236 YS2-3g05.q1k vc_2 703 1065 2164 2525 F 363 89.53 1312 reject_low 5 ALIGNMENT 42 YS2-3g05.q1k vc_3 703 662 2472 2513 C 42 100.00 1312 reject_low 13 ALIGNMENT 42 YS2-3g05.q1k vc_1 703 662 2472 2513 C 42 100.00 1312 reject_low 11 ALIGNMENT 0 YS2-3g05.q1k vc_7 863 92 6412 6411 C 772 0.00 1312 reject_low 14 ALIGNMENT 0 YS2-3g05.q1k vc_5 751 704 5026 5025 C 48 0.00 1312 reject_low 15 ALIGNMENT 0 YS2-3g05.q1k vc_2 751 704 2106 2105 C 48 0.00 1312 reject_low 12 ALIGNMENT 84 YS2-3g05.q1k vc_4 791 703 1446 1534 C 89 98.88 1312 reject_low 10 ALIGNMENT 0 YS2-3g05.q1k vc_2 661 92 2147 2146 C 570 0.00 1312 reject_low 12 ALIGNMENT 42 YS2-3g05.q1k vc_4 662 703 5830 5871 F 42 100.00 1312 reject_low 9 ALIGNMENT 236 YS2-3g05.q1k vc_1 703 1065 2531 2892 F 363 89.53 1312 reject_low 4 ALIGNMENT 0 YS2-3g05.q1k vc_5 664 92 5064 5063 C 573 0.00 1312 reject_low 15 ALIGNMENT 0 YS2-3g05.q1k vc_1 92 702 2531 2530 F 611 0.00 1312 reject_low 4 ALIGNMENT 0 YS2-3g05.q1k vc_5 751 701 2 1 C 51 0.00 1312 reject_low 17 ALIGNMENT 454 YS2-3g06.p1k chr08 671 34 417491 418120 C 638 92.01 1276 accept 0 ALIGNMENT 869 YS2-3g06.q1k chr08 27 1099 413776 414855 F 1073 95.62 1310 accept 0 ALIGNMENT 795 YS2-3g07.q1k chr13 1059 28 30166 31204 C 1032 93.60 1282 accept 0 ALIGNMENT 883 YS2-3g07.p1k chr13 30 1130 26200 27295 F 1101 94.73 1133 accept 0 ALIGNMENT 339 YS2-3g08.q1k chr12 422 32 654740 655130 C 391 97.19 463 ambiguous_trans 22 ALIGNMENT 0 YS2-3g08.q1k chr02 463 423 263490 263489 C 41 0.00 463 ambiguous_trans 14 ALIGNMENT 0 YS2-3g08.q1k chr13 423 463 359007 359006 F 41 0.00 463 ambiguous_trans 17 ALIGNMENT 345 YS2-3g08.q1k chr15 422 32 598731 599121 C 391 97.70 463 ambiguous_trans 16 ALIGNMENT 0 YS2-3g08.q1k chr12 423 463 477983 477982 F 41 0.00 463 ambiguous_trans 21 ALIGNMENT 0 YS2-3g08.q1k chr02 463 423 224953 224952 C 41 0.00 463 ambiguous_trans 13 ALIGNMENT 0 YS2-3g08.q1k chr13 463 423 200248 200247 C 41 0.00 463 ambiguous_trans 23 ALIGNMENT 0 YS2-3g08.q1k chr05 423 463 494500 494499 F 41 0.00 463 ambiguous_trans 27 ALIGNMENT 306 YS2-3g08.q1k chr16 32 422 852244 852634 F 391 94.37 463 ambiguous_trans 31 ALIGNMENT 0 YS2-3g08.q1k chr10 463 423 481878 481877 C 41 0.00 463 ambiguous_trans 20 ALIGNMENT 369 YS2-3g08.q1k chr16 422 32 848327 848717 C 391 99.74 463 ambiguous_trans 12 ALIGNMENT 369 YS2-3g08.q1k chr07 32 422 819011 819401 F 391 99.74 463 ambiguous_trans 10 ALIGNMENT 0 YS2-3g08.q1k chr16 463 423 60368 60367 C 41 0.00 463 ambiguous_trans 25 ALIGNMENT 0 YS2-3g08.q1k chr13 463 423 188081 188080 C 41 0.00 463 ambiguous_trans 11 ALIGNMENT 0 YS2-3g08.q1k chr13 423 463 374705 374704 F 41 0.00 463 ambiguous_trans 26 ALIGNMENT 339 YS2-3g08.q1k chr07 422 32 539680 540070 C 391 97.19 463 ambiguous_trans 19 ALIGNMENT 0 YS2-3g08.q1k chr15 463 423 121619 121618 C 41 0.00 463 ambiguous_trans 24 ALIGNMENT 345 YS2-3g08.q1k chr02 422 32 224952 225342 C 391 97.70 463 ambiguous_trans 13 ALIGNMENT 254 YS2-3g08.p1k vc_7 1 420 13918 14324 F 420 88.10 446 reject_vc 6 ALIGNMENT 0 YS2-3g08.q1k chr10 463 423 476294 476293 C 41 0.00 463 ambiguous_trans 30 ALIGNMENT 318 YS2-3g08.q1k chr16 32 422 806256 806646 F 391 95.40 463 ambiguous_trans 29 ALIGNMENT 0 YS2-3g08.q1k chr15 463 423 598732 598731 C 41 0.00 463 ambiguous_trans 16 ALIGNMENT 339 YS2-3g08.q1k chr15 422 32 121618 122008 C 391 97.19 463 ambiguous_trans 24 ALIGNMENT 306 YS2-3g08.q1k chr10 422 32 476293 476683 C 391 94.37 463 ambiguous_trans 30 ALIGNMENT 327 YS2-3g08.q1k chr05 32 422 494110 494500 F 391 96.16 463 ambiguous_trans 27 ALIGNMENT 257 YS2-3g08.p1k vc_2 420 1 1343 1749 C 420 88.33 446 reject_vc 1 ALIGNMENT 0 YS2-3g08.q1k chr07 463 423 539681 539680 C 41 0.00 463 ambiguous_trans 19 ALIGNMENT 339 YS2-3g08.q1k chr10 422 32 481877 482267 C 391 97.19 463 ambiguous_trans 20 ALIGNMENT 0 YS2-3g08.q1k chr16 423 463 852634 852633 F 41 0.00 463 ambiguous_trans 31 ALIGNMENT 342 YS2-3g08.q1k chr13 32 422 358617 359007 F 391 97.44 463 ambiguous_trans 17 ALIGNMENT 345 YS2-3g08.q1k chr02 422 32 263489 263879 C 391 97.70 463 ambiguous_trans 14 ALIGNMENT 369 YS2-3g08.q1k chr04 422 32 1099678 1100068 C 391 99.74 463 ambiguous_trans 8 ALIGNMENT 257 YS2-3g08.p1k vc_5 420 1 4263 4669 C 420 88.33 446 reject_vc 3 ALIGNMENT 369 YS2-3g08.q1k chr04 32 422 647112 647502 F 391 99.74 463 ambiguous_trans 7 ALIGNMENT 369 YS2-3g08.q1k chr07 32 422 563462 563852 F 391 99.74 463 ambiguous_trans 9 ALIGNMENT 0 YS2-3g08.q1k chr04 423 463 647502 647501 F 41 0.00 463 ambiguous_trans 7 ALIGNMENT 345 YS2-3g08.q1k chr14 422 32 523058 523448 C 391 97.70 463 ambiguous_trans 15 ALIGNMENT 0 YS2-3g08.q1k chr05 423 463 445401 445400 F 41 0.00 463 ambiguous_trans 18 ALIGNMENT 0 YS2-3g08.q1k chr04 423 463 880303 880302 F 41 0.00 463 ambiguous_trans 28 ALIGNMENT 0 YS2-3g08.q1k chr07 423 463 819401 819400 F 41 0.00 463 ambiguous_trans 10 ALIGNMENT 339 YS2-3g08.q1k chr16 422 32 60367 60757 C 391 97.19 463 ambiguous_trans 25 ALIGNMENT 330 YS2-3g08.q1k chr13 32 422 374315 374705 F 391 96.42 463 ambiguous_trans 26 ALIGNMENT 257 YS2-3g08.p1k vc_1 420 1 1343 1749 C 420 88.33 446 reject_vc 0 ALIGNMENT 0 YS2-3g08.q1k chr12 463 423 654741 654740 C 41 0.00 463 ambiguous_trans 22 ALIGNMENT 339 YS2-3g08.q1k chr13 422 32 200247 200637 C 391 97.19 463 ambiguous_trans 23 ALIGNMENT 0 YS2-3g08.q1k chr16 463 423 848328 848327 C 41 0.00 463 ambiguous_trans 12 ALIGNMENT 257 YS2-3g08.p1k vc_3 420 1 1343 1749 C 420 88.33 446 reject_vc 2 ALIGNMENT 369 YS2-3g08.q1k chr13 422 32 188080 188470 C 391 99.74 463 ambiguous_trans 11 ALIGNMENT 324 YS2-3g08.q1k chr04 32 422 879913 880303 F 391 95.91 463 ambiguous_trans 28 ALIGNMENT 339 YS2-3g08.q1k chr05 32 422 445011 445401 F 391 97.19 463 ambiguous_trans 18 ALIGNMENT 254 YS2-3g08.p1k vc_7 1 420 456 862 F 420 88.10 446 reject_vc 5 ALIGNMENT 0 YS2-3g08.q1k chr04 463 423 1099679 1099678 C 41 0.00 463 ambiguous_trans 8 ALIGNMENT 0 YS2-3g08.q1k chr14 463 423 523059 523058 C 41 0.00 463 ambiguous_trans 15 ALIGNMENT 0 YS2-3g08.q1k chr16 423 463 806646 806645 F 41 0.00 463 ambiguous_trans 29 ALIGNMENT 339 YS2-3g08.q1k chr12 32 422 477593 477983 F 391 97.19 463 ambiguous_trans 21 ALIGNMENT 257 YS2-3g08.p1k vc_6 1 420 3712 4118 F 420 88.33 446 reject_vc 4 ALIGNMENT 0 YS2-3g08.q1k chr07 423 463 563852 563851 F 41 0.00 463 ambiguous_trans 9 ALIGNMENT 750 YS2-3g09.q1k chr07 925 26 479187 480077 C 900 97.00 1345 accept 0 ALIGNMENT 0 YS2-3g09.q1k chr16 179 699 485674 485673 F 521 0.00 1345 reject_low 1 ALIGNMENT 85 YS2-3g09.q1k chr16 30 178 485526 485674 F 149 85.91 1345 reject_low 1 ALIGNMENT 816 YS2-3g11.q1k chr13 31 968 510923 511854 F 938 96.70 1341 accept 0 ALIGNMENT 970 YS2-3g11.p1k chr13 1135 28 515572 516682 C 1108 96.93 1135 accept 0 ALIGNMENT 891 YS2-3g12.q1k chr01 31 1178 31489 32616 F 1148 93.99 1407 accept 0 ALIGNMENT 329 YS2-3g12.p1k chr01 563 128 36711 37138 C 436 93.81 1139 accept 0 ALIGNMENT 0 YS2-3g12.q1k chr15 421 62 1042730 1042729 C 360 0.00 1407 reject_low 1 ALIGNMENT 180 YS2-3g12.q1k chr15 804 422 1042347 1042729 C 383 83.03 1407 reject_low 1 ALIGNMENT 889 YS2-3g14.p1k chr12 29 1076 747085 748137 F 1048 96.47 1146 accept 0 ALIGNMENT 855 YS2-3g14.q1k chr12 1093 27 750366 751433 C 1067 96.34 1315 accept 0 ALIGNMENT 0 YS2-3g17.q1k chr07 672 712 148594 148593 F 41 0.00 1285 reject_low 1 ALIGNMENT 0 YS2-3g17.q1k chr07 95 311 148235 148234 F 217 0.00 1285 reject_low 1 ALIGNMENT 268 YS2-3g17.q1k chr07 312 671 148235 148594 F 360 91.94 1285 reject_low 1 ALIGNMENT 795 YS2-3g17.q1k chr05 1003 37 423627 424582 C 967 95.86 1285 accept 0 ALIGNMENT 855 YS2-3g19.q1k chr04 1069 33 1231784 1232822 C 1037 95.18 1228 accept 0 ALIGNMENT 942 YS2-3g20.q1k chr03 31 1161 232548 233677 F 1131 95.67 1316 accept 0 ALIGNMENT 35 YS2-3g21.q1k vc_4 302 237 6276 6339 C 66 86.36 567 reject_vc 10 ALIGNMENT 0 YS2-3g21.p1k chr16 468 486 706712 706711 F 19 0.00 486 accept 0 ALIGNMENT 35 YS2-3g21.q1k vc_4 237 302 1548 1611 F 66 86.36 567 reject_vc 9 ALIGNMENT 196 YS2-3g21.q1k vc_4 369 1 5293 5654 C 369 86.72 567 reject_vc 2 ALIGNMENT 0 YS2-3g21.q1k vc_7 53 54 5172 6360 C 0 0.00 567 reject_vc 7 ALIGNMENT 204 YS2-3g21.q1k vc_5 1 369 2556 2915 F 369 87.26 567 reject_vc 1 ALIGNMENT 197 YS2-3g21.q1k vc_2 1 302 2322 2622 F 302 89.74 567 reject_vc 5 ALIGNMENT 197 YS2-3g21.q1k vc_3 1 302 2689 2989 F 302 89.74 567 reject_vc 6 ALIGNMENT 427 YS2-3g21.p1k chr16 26 467 706270 706712 F 442 99.77 486 accept 0 ALIGNMENT 143 YS2-3g21.q1k vc_7 302 53 4924 5172 C 250 87.20 567|0,1 reject_vc 7 ALIGNMENT 51 YS2-3g21.q1k vc_7 54 3 6360 6411 C 52 100.00 567|1,0 reject_vc 7 ALIGNMENT 197 YS2-3g21.q1k vc_1 1 302 2689 2989 F 302 89.74 567 reject_vc 4 ALIGNMENT 35 YS2-3g21.q1k vc_4 302 237 49 112 C 66 86.36 567 reject_vc 8 ALIGNMENT 198 YS2-3g21.q1k vc_7 351 1 2226 2569 C 351 87.46 567 reject_vc 3 ALIGNMENT 28 YS2-3g22.q1k vc_4 307 241 48 110 C 67 85.07 610 reject_vc 8 ALIGNMENT 226 YS2-3g22.q1k vc_7 374 1 2205 2569 C 374 88.50 610 reject_vc 2 ALIGNMENT 0 YS2-3g22.p1k chr15 520 502 508208 508207 C 19 0.00 520 accept 0 ALIGNMENT 51 YS2-3g22.q1k vc_7 54 3 6360 6411 C 52 100.00 610|1,0 reject_vc 7 ALIGNMENT 226 YS2-3g22.q1k vc_5 1 374 2556 2920 F 374 88.50 610 reject_vc 1 ALIGNMENT 219 YS2-3g22.q1k vc_4 374 1 5288 5654 C 374 87.97 610 reject_vc 3 ALIGNMENT 28 YS2-3g22.q1k vc_4 241 307 1550 1612 F 67 85.07 610 reject_vc 9 ALIGNMENT 212 YS2-3g22.q1k vc_1 1 307 2689 2990 F 307 90.88 610 reject_vc 4 ALIGNMENT 212 YS2-3g22.q1k vc_3 1 307 2689 2990 F 307 90.88 610 reject_vc 6 ALIGNMENT 451 YS2-3g22.p1k chr15 501 29 508207 508681 C 473 98.94 520 accept 0 ALIGNMENT 28 YS2-3g22.q1k vc_4 307 241 6275 6337 C 67 85.07 610 reject_vc 10 ALIGNMENT 0 YS2-3g22.q1k vc_7 53 54 5172 6360 C 0 0.00 610 reject_vc 7 ALIGNMENT 157 YS2-3g22.q1k vc_7 307 53 4923 5172 C 255 88.63 610|0,1 reject_vc 7 ALIGNMENT 212 YS2-3g22.q1k vc_2 1 307 2322 2623 F 307 90.88 610 reject_vc 5 ALIGNMENT 790 YS2-3g23.q1k chr08 33 912 240908 241785 F 880 97.84 1197 accept 0 ALIGNMENT 735 YS2-3g24.q1k chr16 30 929 636782 637662 F 900 95.78 1283 accept 0 ALIGNMENT 894 YS2-3g24.p1k chr16 1049 30 640859 641875 C 1020 96.76 1064 accept 0 ALIGNMENT 866 YS2-3h01.p1k chr02 1074 28 243518 244555 C 1047 95.51 1083 accept 0 ALIGNMENT 915 YS2-3h01.q1k chr02 31 1199 239235 240409 F 1169 93.76 1314 accept 0 ALIGNMENT 182 YS2-3h05.p1k vc_2 364 1 1371 1749 C 364 84.62 766 reject_vc 1 ALIGNMENT 182 YS2-3h05.p1k vc_1 364 1 1371 1749 C 364 84.62 766 reject_vc 0 ALIGNMENT 176 YS2-3h05.p1k vc_7 1 364 456 834 F 364 84.07 766 reject_vc 4 ALIGNMENT 182 YS2-3h05.p1k vc_3 364 1 1371 1749 C 364 84.62 766 reject_vc 2 ALIGNMENT 176 YS2-3h05.p1k vc_7 1 364 13918 14296 F 364 84.07 766 reject_vc 5 ALIGNMENT 182 YS2-3h05.p1k vc_5 364 1 4291 4669 C 364 84.62 766 reject_vc 3 ALIGNMENT 176 YS2-3h05.p1k vc_6 1 311 3712 4034 F 311 86.50 766 reject_vc 6 ALIGNMENT 928 YS2-3h06.q1k chr07 1222 32 133474 134672 C 1191 93.62 1362 accept 0 ALIGNMENT 773 YS2-3h06.p1k chr07 30 967 130362 131312 F 938 94.78 1171 accept 0 ALIGNMENT 932 YS2-3h08.p1k chr07 1120 38 418361 419448 C 1083 96.68 1199 accept 0 ALIGNMENT 955 YS2-3h08.q1k chr07 36 1163 415131 416262 F 1128 96.01 1351 accept 0 ALIGNMENT 919 YS2-3h09.q1k chr11 32 1245 96303 97504 F 1214 93.82 1394 accept 0 ALIGNMENT 896 YS2-3h09.p1k chr11 1199 25 100867 102009 C 1175 94.55 1218 accept 0 ALIGNMENT 882 YS2-3h10.q1k chr08 26 1186 123072 124225 F 1161 92.94 1374 accept 0 ALIGNMENT 862 YS2-3h10.p1k chr08 1099 30 124256 125324 C 1070 94.02 1161 accept 0 ALIGNMENT 1014 YS2-3h11.p1k chr04 1177 30 1310032 1311193 C 1148 96.86 1190 accept 0 ALIGNMENT 725 YS2-3h11.q1k chr04 12 853 1306371 1307210 F 842 96.44 1258 accept 0 ALIGNMENT 239 YS2-3h13.p1k chr08 278 28 78284 78536 C 251 99.20 296 accept 0 ALIGNMENT 0 YS2-3h13.p1k chr08 296 279 78285 78284 C 18 0.00 296 accept 0 ALIGNMENT 0 YS2-3h14.p1k chr12 395 413 100940 100939 F 19 0.00 413 accept 0 ALIGNMENT 334 YS2-3h14.p1k chr12 37 394 100583 100940 F 358 99.16 413 accept 0 ALIGNMENT 824 YS2-3h16.q1k chr02 26 1014 785397 786378 F 989 95.75 1329 accept 0 ALIGNMENT 811 YS2-3h16.p1k chr02 1086 63 788201 789232 C 1024 94.43 1156 accept 0 ALIGNMENT 882 YS2-3h18.q1k chr12 1151 33 960883 961995 C 1119 94.55 1281 accept 0 ALIGNMENT 0 YS2-3h21.p1k vc_1 1022 62 2106 2105 C 961 0.00 1099 reject_low 1 ALIGNMENT 59 YS2-3h21.p1k vc_7 1023 1098 100 177 F 76 93.42 1099 reject_low 5 ALIGNMENT 911 YS2-3h21.p1k chr11 37 1004 122205 123174 F 968 98.86 1099 accept 0 ALIGNMENT 0 YS2-3h21.p1k vc_7 62 1022 100 99 F 961 0.00 1099 reject_low 5 ALIGNMENT 59 YS2-3h21.p1k vc_5 1098 1023 4948 5025 C 76 93.42 1099 reject_low 4 ALIGNMENT 23 YS2-3h21.p1k vc_3 1053 1023 2441 2472 C 31 93.55 1099 reject_low 7 ALIGNMENT 0 YS2-3h21.p1k vc_3 1022 62 2473 2472 C 961 0.00 1099 reject_low 7 ALIGNMENT 0 YS2-3h21.p1k vc_4 62 1022 5871 5870 F 961 0.00 1099 reject_low 3 ALIGNMENT 0 YS2-3h21.p1k vc_1 1022 62 2473 2472 C 961 0.00 1099 reject_low 6 ALIGNMENT 59 YS2-3h21.p1k vc_4 1023 1098 5871 5948 F 76 93.42 1099 reject_low 3 ALIGNMENT 0 YS2-3h21.p1k vc_3 1022 62 2106 2105 C 961 0.00 1099 reject_low 2 ALIGNMENT 0 YS2-3h21.p1k vc_5 1022 62 5026 5025 C 961 0.00 1099 reject_low 4 ALIGNMENT 794 YS2-3h21.q1k chr11 975 30 122234 123174 C 946 95.88 1290 accept 0 ALIGNMENT 59 YS2-3h21.p1k vc_1 1098 1023 2028 2105 C 76 93.42 1099 reject_low 1 ALIGNMENT 23 YS2-3h21.p1k vc_1 1053 1023 2441 2472 C 31 93.55 1099 reject_low 6 ALIGNMENT 59 YS2-3h21.p1k vc_3 1098 1023 2028 2105 C 76 93.42 1099 reject_low 2 ALIGNMENT 877 YS2-3h22.q1k chr12 27 1090 716233 717283 F 1064 95.86 1296 accept 0 ALIGNMENT 791 YS2-3h22.p1k chr12 1041 26 717689 718686 C 1016 95.18 1056 accept 0 ALIGNMENT 71 YS2-3h23.p1k chr05 273 24 32430 32680 C 250 76.40 1094 reject_low 2 ALIGNMENT 0 YS2-3h23.p1k chr05 316 274 32387 32429 C 43 0.00 1094 reject_low 2 ALIGNMENT 25 YS2-3h23.p1k chr05 723 626 31980 32077 C 98 75.51 1094 reject_low 2 ALIGNMENT 0 YS2-3h23.p1k chr05 880 724 31821 31979 C 157 0.00 1094 reject_low 2 ALIGNMENT 0 YS2-3h23.p1k chr05 625 434 32078 32269 C 192 0.00 1094 reject_low 2 ALIGNMENT 826 YS2-3h23.q1k chr14 1039 33 145138 146133 C 1007 96.03 1233 accept 0 ALIGNMENT 26 YS2-3h23.p1k chr05 433 317 32270 32386 C 117 75.21 1094 reject_low 2 ALIGNMENT 136 YS2-3h23.p1k chr14 180 23 136770 136928 C 158 95.57 1094 reject_low 1 ALIGNMENT 0 YS2-3h23.p1k chr14 795 181 136771 136770 C 615 0.00 1094 reject_low 1 ALIGNMENT 938 YS2-3h23.p1k chr14 23 1083 139402 140460 F 1061 96.89 1094 accept 0 ALIGNMENT 33 YS2-3h23.p1k chr05 993 881 31709 31820 C 113 77.88 1094 reject_low 2 ALIGNMENT 957 YS2-3h24.p1k chr08 1105 27 249222 250304 C 1079 97.41 1105 accept 0 ALIGNMENT 740 YS2-3h24.q1k chr08 23 833 248226 249032 F 811 98.40 1404 accept 0 ALIGNMENT 898 YS2-3i02.q1k chr16 1080 24 114704 115759 C 1057 95.65 1364 accept 0 ALIGNMENT 581 YS2-3i02.p1k chr16 29 677 112901 113560 F 649 97.23 1066 accept 0 ALIGNMENT 940 YS2-3i03.p1k chr11 28 1077 150004 151060 F 1050 97.52 1096 accept 0 ALIGNMENT 726 YS2-3i03.q1k chr11 888 26 155760 156612 C 863 95.60 1362 accept 0 ALIGNMENT 112 YS2-3i06.q1k chr12 694 830 451419 451554 F 137 94.89 1389 reject_low 1 ALIGNMENT 624 YS2-3i06.q1k chr12 33 830 459868 460691 F 798 94.49 1389 accept 0 ALIGNMENT 584 YS2-3i06.p1k chr12 1136 456 489860 490543 C 681 95.74 1185 reject_low 2 ALIGNMENT 1030 YS2-3i06.p1k chr12 1136 24 461029 462144 C 1113 97.84 1185 accept 0 ALIGNMENT 0 YS2-3i06.q1k chr12 62 693 451419 451418 F 632 0.00 1389 reject_low 1 ALIGNMENT 0 YS2-3i06.p1k chr12 455 62 490544 490543 C 394 0.00 1185 reject_low 2 ALIGNMENT 1030 YS2-3i06.p1k chr12 1136 24 451892 453007 C 1113 97.84 1185 reject_low 1 ALIGNMENT 0 YS2-3i07.q1k chr12 210 725 490543 490542 F 516 0.00 1331 reject_low 2 ALIGNMENT 162 YS2-3i07.q1k chr12 26 209 490360 490543 F 184 96.74 1331 reject_low 2 ALIGNMENT 967 YS2-3i07.p1k chr12 1122 25 455557 456657 C 1098 96.81 1126 accept 0 ALIGNMENT 967 YS2-3i07.p1k chr12 1122 25 464694 465794 C 1098 96.81 1126 accept 1 ALIGNMENT 893 YS2-3i07.q1k chr12 26 1146 461529 462639 F 1121 94.29 1331 accept 1 ALIGNMENT 893 YS2-3i07.q1k chr12 26 1146 452392 453502 F 1121 94.29 1331 accept 0 ALIGNMENT 880 YS2-3i08.p1k chr10 1111 26 345480 346555 C 1086 95.58 1155 accept 0 ALIGNMENT 948 YS2-3i08.q1k chr10 33 1280 342379 343626 F 1248 93.03 1424 accept 0 ALIGNMENT 0 YS2-3i09.q1k chr04 665 162 1385471 1385470 C 504 0.00 1296 reject_low 1 ALIGNMENT 0 YS2-3i09.q1k chr04 122 92 1385509 1385508 C 31 0.00 1296 reject_low 1 ALIGNMENT 809 YS2-3i09.q1k chr09 1034 27 176591 177605 C 1008 94.35 1296 accept 0 ALIGNMENT 20 YS2-3i09.q1k chr04 161 123 1385470 1385508 C 39 89.74 1296 reject_low 1 ALIGNMENT 0 YS2-3i10.q1k chr12 255 137 482045 482044 C 119 0.00 255 reject_low 3 ALIGNMENT 0 YS2-3i10.q1k chr12 255 217 459596 459595 C 39 0.00 255 reject_low 2 ALIGNMENT 0 YS2-3i10.p1k chr12 62 111 489348 489347 F 50 0.00 223 reject_low 6 ALIGNMENT 112 YS2-3i10.q1k chr12 136 25 489348 489459 C 112 100.00 255 reject_low 5 ALIGNMENT 0 YS2-3i10.q1k vc_7 62 217 13525 13524 F 156 0.00 255 reject_low 11 ALIGNMENT 191 YS2-3i10.p1k chr12 32 223 459595 459786 F 192 100.00 223 accept 0 ALIGNMENT 112 YS2-3i10.p1k chr12 112 223 472464 472575 F 112 100.00 223 reject_low 3 ALIGNMENT 41 YS2-3i10.q1k vc_3 255 215 2472 2512 C 41 100.00 255 reject_low 8 ALIGNMENT 0 YS2-3i10.p1k chr12 62 111 482044 482043 F 50 0.00 223 reject_low 4 ALIGNMENT 38 YS2-3i10.q1k vc_7 218 255 13525 13562 F 38 100.00 255 reject_low 11 ALIGNMENT 112 YS2-3i10.p1k chr12 112 223 489348 489459 F 112 100.00 223 reject_low 6 ALIGNMENT 0 YS2-3i10.q1k vc_3 214 62 2513 2512 C 153 0.00 255 reject_low 8 ALIGNMENT 39 YS2-3i10.q1k vc_5 255 217 5025 5063 C 39 100.00 255 reject_low 10 ALIGNMENT 0 YS2-3i10.q1k vc_4 62 214 5831 5830 F 153 0.00 255 reject_low 9 ALIGNMENT 0 YS2-3i10.q1k vc_1 214 62 2513 2512 C 153 0.00 255 reject_low 7 ALIGNMENT 191 YS2-3i10.p1k chr12 32 223 468732 468923 F 192 100.00 223 reject_low 1 ALIGNMENT 112 YS2-3i10.q1k chr12 136 25 485696 485807 C 112 100.00 255 reject_low 4 ALIGNMENT 41 YS2-3i10.q1k vc_1 255 215 2472 2512 C 41 100.00 255 reject_low 7 ALIGNMENT 112 YS2-3i10.p1k chr12 112 223 482044 482155 F 112 100.00 223 reject_low 4 ALIGNMENT 36 YS2-3i10.q1k vc_5 252 217 1 36 C 36 100.00 255 reject_low 12 ALIGNMENT 0 YS2-3i10.q1k chr12 255 137 489349 489348 C 119 0.00 255 reject_low 5 ALIGNMENT 112 YS2-3i10.q1k chr12 136 25 482044 482155 C 112 100.00 255 reject_low 3 ALIGNMENT 191 YS2-3i10.q1k chr12 216 25 459595 459786 C 192 100.00 255 reject_low 2 ALIGNMENT 0 YS2-3i10.q1k chr12 255 217 468733 468732 C 39 0.00 255 accept 0 ALIGNMENT 191 YS2-3i10.q1k chr12 216 25 468732 468923 C 192 100.00 255 accept 0 ALIGNMENT 0 YS2-3i10.p1k chr12 62 111 472464 472463 F 50 0.00 223 reject_low 3 ALIGNMENT 112 YS2-3i10.q1k chr12 136 25 472464 472575 C 112 100.00 255 reject_low 1 ALIGNMENT 112 YS2-3i10.p1k chr12 112 223 485696 485807 F 112 100.00 223 reject_low 5 ALIGNMENT 0 YS2-3i10.q1k vc_5 216 62 37 36 C 155 0.00 255 reject_low 12 ALIGNMENT 41 YS2-3i10.q1k vc_4 215 255 5831 5871 F 41 100.00 255 reject_low 9 ALIGNMENT 0 YS2-3i10.q1k vc_5 216 62 5064 5063 C 155 0.00 255 reject_low 10 ALIGNMENT 0 YS2-3i10.q1k chr12 255 137 472465 472464 C 119 0.00 255 reject_low 1 ALIGNMENT 0 YS2-3i10.q1k chr12 255 137 485697 485696 C 119 0.00 255 reject_low 4 ALIGNMENT 0 YS2-3i10.p1k chr12 62 111 485696 485695 F 50 0.00 223 reject_low 5 ALIGNMENT 0 YS2-3i11.q1k chr16 665 470 860374 860373 C 196 0.00 1492 reject_low 12 ALIGNMENT 73 YS2-3i11.q1k chr03 386 468 142689 142769 F 83 97.59 1492 reject_low 10 ALIGNMENT 0 YS2-3i11.q1k chr10 665 473 531738 531737 C 193 0.00 1492 reject_low 3 ALIGNMENT 72 YS2-3i11.q1k chr15 397 468 226609 226680 F 72 100.00 1492 reject_low 14 ALIGNMENT 0 YS2-3i11.q1k chr16 396 92 572337 572336 C 305 0.00 1492 reject_low 15 ALIGNMENT 0 YS2-3i11.q1k chr04 665 469 992826 992825 C 197 0.00 1492 reject_low 11 ALIGNMENT 0 YS2-3i11.q1k chr05 473 665 61965 61964 F 193 0.00 1492 reject_low 8 ALIGNMENT 79 YS2-3i11.q1k chr02 381 470 197616 197705 F 90 96.67 1492 reject_low 4 ALIGNMENT 0 YS2-3i11.q1k chr13 92 385 183886 183885 F 294 0.00 1492 reject_low 9 ALIGNMENT 0 YS2-3i11.q1k chr02 92 380 197616 197615 F 289 0.00 1492 reject_low 4 ALIGNMENT 0 YS2-3i11.q1k chr15 469 665 226680 226679 F 197 0.00 1492 reject_low 14 ALIGNMENT 74 YS2-3i11.q1k chr07 482 397 845639 845724 C 86 95.35 1492 reject_low 1 ALIGNMENT 74 YS2-3i11.q1k chr13 386 467 183886 183968 F 82 97.56 1492 reject_low 9 ALIGNMENT 738 YS2-3i11.q1k chr10 30 915 396273 397159 F 886 96.28 1492 accept 0 ALIGNMENT 0 YS2-3i11.q1k chr16 665 468 572267 572266 C 198 0.00 1492 reject_low 15 ALIGNMENT 0 YS2-3i11.q1k chr04 396 92 83620 83619 C 305 0.00 1492 reject_low 13 ALIGNMENT 70 YS2-3i11.q1k chr16 467 397 572266 572336 C 71 100.00 1492 reject_low 15 ALIGNMENT 77 YS2-3i11.q1k chr06 387 470 180956 181039 F 84 97.62 1492 reject_low 7 ALIGNMENT 969 YS2-3i11.p1k chr10 1151 34 400353 401477 C 1118 96.69 1161 accept 0 ALIGNMENT 0 YS2-3i11.q1k chr03 92 385 142689 142688 F 294 0.00 1492 reject_low 10 ALIGNMENT 0 YS2-3i11.q1k chr02 471 665 197705 197704 F 195 0.00 1492 reject_low 4 ALIGNMENT 72 YS2-3i11.q1k chr04 468 397 83548 83619 C 72 100.00 1492 reject_low 13 ALIGNMENT 0 YS2-3i11.q1k chr03 469 665 142769 142768 F 197 0.00 1492 reject_low 10 ALIGNMENT 0 YS2-3i11.q1k chr13 468 665 183968 183967 F 198 0.00 1492 reject_low 9 ALIGNMENT 0 YS2-3i11.q1k chr15 92 396 226609 226608 F 305 0.00 1492 reject_low 14 ALIGNMENT 78 YS2-3i11.q1k chr06 469 387 162220 162303 C 83 98.80 1492 reject_low 6 ALIGNMENT 0 YS2-3i11.q1k chr06 92 386 180956 180955 F 295 0.00 1492 reject_low 7 ALIGNMENT 73 YS2-3i11.q1k chr16 469 397 860373 860445 C 73 100.00 1492 reject_low 12 ALIGNMENT 0 YS2-3i11.q1k chr15 665 468 282165 282164 C 198 0.00 1492 reject_low 5 ALIGNMENT 0 YS2-3i11.q1k chr06 386 92 162304 162303 C 295 0.00 1492 reject_low 6 ALIGNMENT 76 YS2-3i11.q1k chr05 397 472 61890 61965 F 76 100.00 1492 reject_low 8 ALIGNMENT 0 YS2-3i11.q1k chr07 92 376 930936 930935 F 285 0.00 1492 reject_low 2 ALIGNMENT 0 YS2-3i11.q1k chr10 378 92 531832 531831 C 287 0.00 1492 reject_low 3 ALIGNMENT 0 YS2-3i11.q1k chr16 396 92 860446 860445 C 305 0.00 1492 reject_low 12 ALIGNMENT 0 YS2-3i11.q1k chr07 396 92 845725 845724 C 305 0.00 1492 reject_low 1 ALIGNMENT 0 YS2-3i11.q1k chr06 665 470 162221 162220 C 196 0.00 1492 reject_low 6 ALIGNMENT 0 YS2-3i11.q1k chr07 665 483 845640 845639 C 183 0.00 1492 reject_low 1 ALIGNMENT 79 YS2-3i11.q1k chr07 377 472 930936 931031 F 96 94.79 1492 reject_low 2 ALIGNMENT 0 YS2-3i11.q1k chr04 389 92 992904 992903 C 298 0.00 1492 reject_low 11 ALIGNMENT 0 YS2-3i11.q1k chr04 665 469 83549 83548 C 197 0.00 1492 reject_low 13 ALIGNMENT 0 YS2-3i11.q1k chr07 473 665 931031 931030 F 193 0.00 1492 reject_low 2 ALIGNMENT 0 YS2-3i11.q1k chr15 386 92 282245 282244 C 295 0.00 1492 reject_low 5 ALIGNMENT 0 YS2-3i11.q1k chr05 92 396 61890 61889 F 305 0.00 1492 reject_low 8 ALIGNMENT 76 YS2-3i11.q1k chr10 472 379 531737 531831 C 94 94.68 1492 reject_low 3 ALIGNMENT 72 YS2-3i11.q1k chr04 468 390 992825 992903 C 79 97.47 1492 reject_low 11 ALIGNMENT 0 YS2-3i11.q1k chr06 471 665 181039 181038 F 195 0.00 1492 reject_low 7 ALIGNMENT 79 YS2-3i11.q1k chr15 467 387 282164 282244 C 81 100.00 1492 reject_low 5 ALIGNMENT 0 YS2-3i12.p1k chrm 62 348 66822 66821 F 287 0.00 1156 reject_low 5 ALIGNMENT 33 YS2-3i12.p1k chrm 349 396 66822 66868 F 48 91.67 1156 reject_low 5 ALIGNMENT 640 YS2-3i12.q1k chrm 861 4 36316 37172 C 858 96.97 1349 accept 0 ALIGNMENT 0 YS2-3i12.p1k chrm 397 804 66868 66867 F 408 0.00 1156 reject_low 5 ALIGNMENT 0 YS2-3i12.p1k chr04 569 62 149172 149171 C 508 0.00 1156 reject_low 3 ALIGNMENT 0 YS2-3i12.p1k chr04 804 618 149125 149124 C 187 0.00 1156 reject_low 3 ALIGNMENT 26 YS2-3i12.p1k chrm 761 733 49081 49109 C 29 96.55 1156 reject_low 2 ALIGNMENT 33 YS2-3i12.p1k chrm 397 353 12268 12312 C 45 93.33 1156 reject_low 6 ALIGNMENT 475 YS2-3i12.p1k chrm 27 1084 35478 36573 F 1058 91.49 1156 accept 0 ALIGNMENT 20 YS2-3i12.p1k chr04 617 570 149124 149171 C 48 100.00 1156 reject_low 3 ALIGNMENT 80 YS2-3i12.p1k chrm 497 351 67838 67992 C 147 89.80 1156 reject_low 1 ALIGNMENT 0 YS2-3i12.p1k chrm 804 398 12269 12268 C 407 0.00 1156 reject_low 6 ALIGNMENT 0 YS2-3i12.p1k chrm 350 62 67993 67992 C 289 0.00 1156 reject_low 1 ALIGNMENT 0 YS2-3i12.p1k chrm 804 762 49082 49081 C 43 0.00 1156 reject_low 2 ALIGNMENT 0 YS2-3i12.p1k chrm 732 62 49110 49109 C 671 0.00 1156 reject_low 2 ALIGNMENT 0 YS2-3i12.p1k chrm 497 804 8381 8380 F 308 0.00 1156 reject_low 4 ALIGNMENT 0 YS2-3i12.p1k chrm 804 498 67839 67838 C 307 0.00 1156 reject_low 1 ALIGNMENT 27 YS2-3i12.p1k chrm 353 496 8234 8381 F 144 79.17 1156 reject_low 4 ALIGNMENT 0 YS2-3i12.p1k chrm 352 62 12313 12312 C 291 0.00 1156 reject_low 6 ALIGNMENT 0 YS2-3i12.p1k chrm 62 352 8234 8233 F 291 0.00 1156 reject_low 4 ALIGNMENT 901 YS2-3i14.q1k chr15 37 1076 998684 999708 F 1040 97.21 1356 accept 0 ALIGNMENT 812 YS2-3i14.p1k chr15 1059 42 1002110 1003134 C 1018 94.20 1088 accept 0 ALIGNMENT 0 YS2-3i16.p1k chr04 62 204 1279585 1279584 F 143 0.00 1183 reject_low 1 ALIGNMENT 22 YS2-3i16.q1k chr15 355 321 938085 938119 C 35 88.57 1365 reject_low 3 ALIGNMENT 22 YS2-3i16.p1k chr04 205 275 1279585 1279655 F 71 77.46 1183 reject_low 1 ALIGNMENT 0 YS2-3i16.q1k chr15 794 356 938086 938085 C 439 0.00 1365 reject_low 3 ALIGNMENT 1022 YS2-3i16.p1k chr15 28 1177 932006 933159 F 1150 96.35 1183 accept 0 ALIGNMENT 0 YS2-3i16.p1k chr04 276 405 1279656 1279755 F 130 0.00 1183 reject_low 1 ALIGNMENT 0 YS2-3i16.q1k chr15 320 62 938120 938119 C 259 0.00 1365 reject_low 3 ALIGNMENT 26 YS2-3i16.q1k chr15 133 99 937863 937897 C 35 91.43 1365 reject_low 2 ALIGNMENT 61 YS2-3i16.p1k chr04 406 745 1279756 1280095 F 340 72.94 1183 reject_low 1 ALIGNMENT 0 YS2-3i16.p1k chr04 746 813 1280095 1280094 F 68 0.00 1183 reject_low 1 ALIGNMENT 833 YS2-3i16.q1k chr15 1111 26 937131 938191 C 1086 94.75 1365 accept 0 ALIGNMENT 0 YS2-3i16.q1k chr15 794 134 937864 937863 C 661 0.00 1365 reject_low 2 ALIGNMENT 0 YS2-3i16.q1k chr15 98 62 937898 937897 C 37 0.00 1365 reject_low 2 ALIGNMENT 920 YS2-3i17.p1k chr16 1095 36 827199 828262 C 1060 96.79 1095 accept 0 ALIGNMENT 0 YS2-3i17.q1k chr16 548 586 252295 252294 F 39 0.00 1272 reject_low 1 ALIGNMENT 25 YS2-3i17.p1k chr16 789 744 252250 252295 C 46 93.48 1095 reject_low 2 ALIGNMENT 675 YS2-3i17.q1k chr16 24 934 827029 827938 F 911 92.97 1272 accept 0 ALIGNMENT 0 YS2-3i17.p1k chr16 805 790 252251 252250 C 16 0.00 1095 reject_low 2 ALIGNMENT 25 YS2-3i17.q1k chr16 502 547 252250 252295 F 46 93.48 1272 reject_low 1 ALIGNMENT 0 YS2-3i17.q1k chr16 92 501 252250 252249 F 410 0.00 1272 reject_low 1 ALIGNMENT 0 YS2-3i17.p1k chr16 743 62 252296 252295 C 682 0.00 1095 reject_low 2 ALIGNMENT 280 YS2-3i18.p1k chr12 100 543 821548 821984 F 444 89.64 907 accept 0 ALIGNMENT 829 YS2-3i18.q1k chr12 1008 33 826369 827331 C 976 96.41 1318 accept 0 ALIGNMENT 0 YS2-3i19.p1k chr15 452 469 454840 454839 F 18 0.00 469 accept 0 ALIGNMENT 402 YS2-3i19.p1k chr15 27 451 454416 454840 F 425 99.06 469 accept 0 ALIGNMENT 909 YS2-3i20.q1k chr02 32 1057 253155 254173 F 1026 97.17 1302 accept 0 ALIGNMENT 949 YS2-3i20.p1k chr02 1136 26 256684 257798 C 1111 95.86 1142 accept 0 ALIGNMENT 47 YS2-3i21.q1k vc_7 424 309 4589 4699 C 116 83.62 598 reject_vc 7 ALIGNMENT 0 YS2-3i21.q1k vc_4 298 314 1606 1881 F 17 0.00 598 reject_vc 10 ALIGNMENT 30 YS2-3i21.q1k vc_4 240 297 1548 1605 F 58 84.48 598 reject_vc 10 ALIGNMENT 390 YS2-3i21.p1k chr02 33 444 803331 803741 F 412 99.03 462 accept 0 ALIGNMENT 185 YS2-3i21.q1k vc_7 297 53 4930 5172 C 245 92.65 598|0,1 reject_vc 7 ALIGNMENT 285 YS2-3i21.q1k vc_7 445 1 2136 2569 C 445 90.34 598 reject_vc 2 ALIGNMENT 30 YS2-3i21.q1k vc_4 297 240 6282 6339 C 58 84.48 598 reject_vc 9 ALIGNMENT 0 YS2-3i21.p1k chr02 445 462 803741 803740 F 18 0.00 462 accept 0 ALIGNMENT 240 YS2-3i21.q1k vc_3 1 297 2689 2983 F 297 94.28 598 reject_vc 6 ALIGNMENT 51 YS2-3i21.q1k vc_7 54 3 6360 6411 C 52 100.00 598|1,0 reject_vc 7 ALIGNMENT 46 YS2-3i21.q1k vc_4 315 445 1882 2005 F 131 82.44 598 reject_vc 10 ALIGNMENT 240 YS2-3i21.q1k vc_1 1 297 2689 2983 F 297 94.28 598 reject_vc 4 ALIGNMENT 0 YS2-3i21.q1k vc_7 308 298 4700 4929 C 11 0.00 598 reject_vc 7 ALIGNMENT 240 YS2-3i21.q1k vc_2 1 297 2322 2616 F 297 94.28 598 reject_vc 5 ALIGNMENT 276 YS2-3i21.q1k vc_4 429 1 5234 5654 C 429 90.44 598 reject_vc 3 ALIGNMENT 0 YS2-3i21.q1k vc_7 53 54 5172 6360 C 0 0.00 598 reject_vc 7 ALIGNMENT 285 YS2-3i21.q1k vc_5 1 445 2556 2989 F 445 90.34 598 reject_vc 1 ALIGNMENT 30 YS2-3i21.q1k vc_4 297 240 55 112 C 58 84.48 598 reject_vc 8 ALIGNMENT 742 YS2-3i22.p1k chr10 1009 25 52342 53343 C 985 93.10 1059 accept 0 ALIGNMENT 890 YS2-3i22.q1k chr10 24 1101 50075 51139 F 1078 95.73 1269 accept 0 ALIGNMENT 925 YS2-3i23.p1k chr09 1037 36 419787 420784 C 1002 97.70 1037 accept 0 ALIGNMENT 781 YS2-3i23.q1k chr09 29 981 414696 415637 F 953 95.28 1235 accept 0 ALIGNMENT 234 YS2-3i24.p1k vc_3 391 1 1358 1749 C 391 87.47 395 reject_vc 2 ALIGNMENT 234 YS2-3i24.p1k vc_5 391 1 4278 4669 C 391 87.47 395 reject_vc 3 ALIGNMENT 234 YS2-3i24.p1k vc_1 391 1 1358 1749 C 391 87.47 395 reject_vc 0 ALIGNMENT 228 YS2-3i24.p1k vc_7 1 391 456 847 F 391 86.96 395 reject_vc 5 ALIGNMENT 234 YS2-3i24.p1k vc_6 1 391 3712 4103 F 391 87.47 395 reject_vc 4 ALIGNMENT 234 YS2-3i24.p1k vc_2 391 1 1358 1749 C 391 87.47 395 reject_vc 1 ALIGNMENT 228 YS2-3i24.p1k vc_7 1 391 13918 14309 F 391 86.96 395 reject_vc 6 ALIGNMENT 800 YS2-3j01.q1k chr14 30 1059 405509 406529 F 1030 94.17 1352 accept 0 ALIGNMENT 509 YS2-3j01.p1k chr14 628 35 406103 406700 C 594 95.62 1216 accept 0 ALIGNMENT 924 YS2-3j03.q1k chr16 1092 24 599127 600195 C 1069 96.82 1339 accept 0 ALIGNMENT 795 YS2-3j03.p1k chr16 30 1062 594821 595868 F 1033 94.68 1156 accept 0 ALIGNMENT 31 YS2-3j04.p1k chrm 561 607 66824 66869 F 47 89.36 1122 reject_low 9 ALIGNMENT 0 YS2-3j04.p1k chrm 62 550 34924 34923 F 489 0.00 1122 reject_low 4 ALIGNMENT 32 YS2-3j04.p1k chrm 551 606 34924 34976 F 56 87.50 1122 reject_low 4 ALIGNMENT 0 YS2-3j04.p1k chrm 62 560 66824 66823 F 499 0.00 1122 reject_low 9 ALIGNMENT 28 YS2-3j04.q1k chrm 9 159 68507 68666 F 151 80.13 1320 reject_low 2 ALIGNMENT 29 YS2-3j04.q1k chrm 397 353 83053 83097 C 45 91.11 1320 reject_low 1 ALIGNMENT 0 YS2-3j04.q1k chrm 160 312 68666 68665 F 153 0.00 1320 reject_low 2 ALIGNMENT 32 YS2-3j04.q1k chrm 405 355 48093 48143 C 51 88.24 1320 reject_low 4 ALIGNMENT 226 YS2-3j04.q1k chrm 663 152 77401 77938 C 512 85.94 1320 reject_bad_break 0 ALIGNMENT 0 YS2-3j04.q1k chrm 334 62 10456 10455 C 273 0.00 1320 reject_low 10 ALIGNMENT 0 YS2-3j04.q1k chrm 62 97 50716 50715 F 36 0.00 1320 reject_low 3 ALIGNMENT 0 YS2-3j04.q1k chrm 350 254 29887 34137 C 97 0.00 1320 reject_low 15 ALIGNMENT 0 YS2-3j04.p1k chrm 62 563 48102 48101 F 502 0.00 1122 reject_low 7 ALIGNMENT 0 YS2-3j04.q1k chrm 332 181 34352 35111 C 152 0.00 1320 reject_low 13 ALIGNMENT 55 YS2-3j04.q1k chrm 98 159 50716 50776 F 62 98.39 1320 reject_low 3 ALIGNMENT 0 YS2-3j04.p1k chrm 192 552 75873 76585 F 361 0.00 1122 reject_low 1 ALIGNMENT 32 YS2-3j04.q1k chrm 180 142 35112 35150 C 39 94.87 1320 reject_low 13,14 ALIGNMENT 23 YS2-3j04.q1k chrm 345 385 31029 31070 F 41 87.80 1320 reject_low 11 ALIGNMENT 53 YS2-3j04.q1k chrm 107 2 77931 78036 C 106 98.11 1320 reject_bad_break 0 ALIGNMENT 0 YS2-3j04.q1k chrm 334 181 34996 35111 C 154 0.00 1320 reject_low 14 ALIGNMENT 0 YS2-3j04.q1k chrm 141 62 35151 35150 C 80 0.00 1320 reject_low 13,14 ALIGNMENT 43 YS2-3j04.q1k chrm 159 62 34193 34286 C 98 84.69 1320 reject_low 15 ALIGNMENT 0 YS2-3j04.q1k chrm 182 160 34211 34192 C 23 0.00 1320 reject_low 15 ALIGNMENT 0 YS2-3j04.q1k chrm 354 62 48144 48143 C 293 0.00 1320 reject_low 4 ALIGNMENT 32 YS2-3j04.p1k chrm 564 624 48102 48164 F 61 85.25 1122 reject_low 7 ALIGNMENT 30 YS2-3j04.p1k chrm 553 606 76586 76636 F 54 87.04 1122 reject_low 1 ALIGNMENT 30 YS2-3j04.q1k chrm 393 335 10397 10455 C 59 86.44 1320 reject_low 10 ALIGNMENT 130 YS2-3j04.p1k chrm 42 191 75723 75872 F 150 100.00 1122|0,1 reject_bad_break 0 reject_low 1 ALIGNMENT 33 YS2-3j04.q1k chrm 348 428 4530 4608 F 81 82.72 1320 reject_low 5 ALIGNMENT 0 YS2-3j04.q1k chrm 312 159 33768 33767 C 154 0.00 1320 reject_low 8 ALIGNMENT 22 YS2-3j04.q1k chrm 158 62 33767 33856 C 97 79.38 1320 reject_low 8 ALIGNMENT 0 YS2-3j04.p1k chrm 563 62 75663 75662 C 502 0.00 1122 reject_low 2 ALIGNMENT 29 YS2-3j04.q1k chrm 199 162 35134 35171 C 38 92.11 1320|8,0 reject_low 12 ALIGNMENT 377 YS2-3j04.p1k chrm 190 861 75902 76572 F 672 94.49 1122|1,0 reject_bad_break 0 ALIGNMENT 0 YS2-3j04.q1k chrm 62 344 31029 31028 F 283 0.00 1320 reject_low 11 ALIGNMENT 40 YS2-3j04.q1k chrm 406 351 29830 29886 C 56 91.07 1320 reject_low 15 ALIGNMENT 32 YS2-3j04.p1k chrm 563 642 52771 52851 F 80 82.50 1122 reject_low 6 ALIGNMENT 31 YS2-3j04.p1k chrm 631 564 75594 75662 C 68 82.35 1122 reject_low 2 ALIGNMENT 0 YS2-3j04.q1k chrm 312 254 34139 34138 C 59 0.00 1320 reject_low 12 ALIGNMENT 0 YS2-3j04.q1k chrm 191 192 34202 35141 C 0 0.00 1320 reject_low 12 ALIGNMENT 24 YS2-3j04.q1k chrm 253 183 34138 34210 C 71 80.28 1320|0,9 reject_low 12,15 ALIGNMENT 36 YS2-3j04.q1k chrm 407 335 34922 34995 C 73 84.93 1320 reject_low 14 ALIGNMENT 0 YS2-3j04.q1k chrm 151 108 77939 77930 C 44 0.00 1320 reject_bad_break 0 ALIGNMENT 0 YS2-3j04.q1k chrm 161 62 35172 35171 C 100 0.00 1320 reject_low 12 ALIGNMENT 41 YS2-3j04.q1k chrm 397 333 34286 34351 C 65 89.23 1320 reject_low 13 ALIGNMENT 0 YS2-3j04.p1k chrm 191 190 75872 75902 F 0 0.00 1122 reject_bad_break 0 ALIGNMENT 0 YS2-3j04.q1k chrm 352 62 83098 83097 C 291 0.00 1320 reject_low 1 ALIGNMENT 0 YS2-3j04.q1k chrm 62 347 4530 4529 F 286 0.00 1320 reject_low 5 ALIGNMENT 0 YS2-3j04.q1k chrm 160 312 50776 50775 F 153 0.00 1320 reject_low 3 ALIGNMENT 0 YS2-3j04.p1k chrm 62 562 52771 52770 F 501 0.00 1122 reject_low 6 ALIGNMENT 947 YS2-3j05.q1k chr11 32 1195 250540 251704 F 1164 94.85 1342 accept 0 ALIGNMENT 935 YS2-3j05.p1k chr11 1172 32 255528 256672 C 1141 94.83 1190 accept 0 ALIGNMENT 466 YS2-3j06.p1k chr07 954 179 481044 481819 C 776 86.34 1164 reject_low 1 ALIGNMENT 925 YS2-3j06.p1k chr16 30 1110 483631 484726 F 1081 95.37 1164 accept 0 ALIGNMENT 947 YS2-3j06.q1k chr16 1184 27 487173 488331 C 1158 95.60 1336 accept 0 ALIGNMENT 0 YS2-3j06.p1k chr07 178 62 481820 481819 C 117 0.00 1164 reject_low 1 ALIGNMENT 210 YS2-3j07.q1k vc_4 406 1 5245 5654 C 406 86.21 780 reject_vc 3 ALIGNMENT 202 YS2-3j07.q1k vc_3 1 308 2689 2990 F 308 90.26 780 reject_vc 6 ALIGNMENT 51 YS2-3j07.q1k vc_7 54 3 6360 6411 C 52 100.00 780|1,0 reject_vc 7 ALIGNMENT 202 YS2-3j07.q1k vc_1 1 308 2689 2990 F 308 90.26 780 reject_vc 4 ALIGNMENT 383 YS2-3j07.p1k chr06 427 37 228521 228911 C 391 99.49 439 accept 0 ALIGNMENT 217 YS2-3j07.q1k vc_5 1 406 2556 2963 F 406 86.70 780 reject_vc 1 ALIGNMENT 0 YS2-3j07.q1k vc_7 53 54 5172 6360 C 0 0.00 780 reject_vc 7 ALIGNMENT 202 YS2-3j07.q1k vc_2 1 308 2322 2623 F 308 90.26 780 reject_vc 5 ALIGNMENT 148 YS2-3j07.q1k vc_7 308 53 4923 5172 C 256 87.89 780|0,1 reject_vc 7 ALIGNMENT 217 YS2-3j07.q1k vc_7 406 1 2162 2569 C 406 86.70 780 reject_vc 2 ALIGNMENT 937 YS2-3j09.p1k chr04 29 1179 705972 707132 F 1151 94.53 1219 accept 0 ALIGNMENT 815 YS2-3j09.q1k chr04 1016 34 709397 710365 C 983 95.63 1384 accept 0 ALIGNMENT 67 YS2-3j10.q1k chrm 4 87 56812 56895 F 84 94.05 1284 reject_low 4 ALIGNMENT 0 YS2-3j10.p1k chrm 752 734 12676 12675 C 19 0.00 752 reject_low 3 ALIGNMENT 0 YS2-3j10.p1k chrm 591 752 82328 82327 F 162 0.00 752 reject_bad_break 0 ALIGNMENT 0 YS2-3j10.p1k chrm 62 557 44860 44859 F 496 0.00 752 reject_low 5 ALIGNMENT 0 YS2-3j10.p1k chrm 562 62 12843 12842 C 501 0.00 752 reject_low 3 ALIGNMENT 0 YS2-3j10.p1k chrm 150 62 2606 2605 C 89 0.00 752 reject_low 10 ALIGNMENT 0 YS2-3j10.p1k chrm 720 752 30312 30311 F 33 0.00 752 reject_low 2 ALIGNMENT 88 YS2-3j10.p1k chrm 622 733 82325 82435 F 112 98.21 752 reject_low 1 ALIGNMENT 109 YS2-3j10.p1k chrm 733 563 12675 12842 C 171 92.40 752 reject_low 3 ALIGNMENT 0 YS2-3j10.p1k chrm 568 62 4371 4370 C 507 0.00 752 reject_low 7 ALIGNMENT 63 YS2-3j10.q1k chrm 4 87 12760 12842 F 84 94.05 1284 reject_low 9 ALIGNMENT 0 YS2-3j10.p1k chrm 734 752 82435 82434 F 19 0.00 752 reject_low 1 ALIGNMENT 0 YS2-3j10.p1k chrm 752 204 2553 2552 C 549 0.00 752 reject_low 10 ALIGNMENT 0 YS2-3j10.p1k chrm 726 752 32332 32331 F 27 0.00 752 reject_low 11 ALIGNMENT 0 YS2-3j10.q1k chrm 88 133 56895 56894 F 46 0.00 1284 reject_low 4 ALIGNMENT 29 YS2-3j10.p1k chrm 210 151 57264 57323 C 60 86.67 752 reject_low 4,8 ALIGNMENT 0 YS2-3j10.p1k chrm 752 734 56726 56725 C 19 0.00 752 reject_low 8 ALIGNMENT 182 YS2-3j10.p1k chrm 204 590 81944 82328 F 387 95.09 752 reject_bad_break 0 ALIGNMENT 0 YS2-3j10.p1k chrm 62 535 30131 30130 F 474 0.00 752 reject_low 2 ALIGNMENT 0 YS2-3j10.p1k chrm 154 621 81944 82324 F 468 0.00 752 reject_low 1 ALIGNMENT 68 YS2-3j10.q1k chrm 92 4 44860 44946 C 89 94.38 1284 reject_low 2 ALIGNMENT 139 YS2-3j10.q1k chrm 422 60 81968 82328 C 363 89.26 1284 reject_bad_break 0 ALIGNMENT 0 YS2-3j10.q1k chrm 133 115 30132 30131 C 19 0.00 1284 reject_low 6 ALIGNMENT 0 YS2-3j10.q1k chrm 88 133 12842 12841 F 46 0.00 1284 reject_low 9 ALIGNMENT 64 YS2-3j10.q1k chrm 4 81 4292 4370 F 78 94.87 1284 reject_low 3 ALIGNMENT 105 YS2-3j10.p1k chrm 733 569 4207 4370 C 165 91.52 752 reject_low 7 ALIGNMENT 111 YS2-3j10.p1k chrm 558 725 44860 45026 F 168 92.26 752 reject_low 5 ALIGNMENT 0 YS2-3j10.p1k chrm 726 752 45026 45025 F 27 0.00 752 reject_low 5 ALIGNMENT 0 YS2-3j10.p1k chrm 752 734 4208 4207 C 19 0.00 752 reject_low 7 ALIGNMENT 108 YS2-3j10.p1k chrm 733 563 56725 56895 C 171 91.23 752 reject_low 8 ALIGNMENT 0 YS2-3j10.p1k chrm 562 211 56896 57263 C 352 0.00 752 reject_low 8 ALIGNMENT 0 YS2-3j10.p1k chrm 62 626 32232 32231 F 565 0.00 752 reject_low 11 ALIGNMENT 72 YS2-3j10.p1k chrm 37 153 81827 81943 F 117 98.29 752 reject_bad_break 0 reject_low 1 ALIGNMENT 0 YS2-3j10.q1k chrm 133 93 44861 44860 C 41 0.00 1284 reject_low 2 ALIGNMENT 0 YS2-3j10.p1k chrm 752 211 57265 57264 C 542 0.00 752 reject_low 4 ALIGNMENT 36 YS2-3j10.p1k chrm 627 725 32232 32332 F 99 83.84 752 reject_low 11 ALIGNMENT 111 YS2-3j10.p1k chrm 536 719 30131 30312 F 184 91.30 752 reject_low 2 ALIGNMENT 21 YS2-3j10.p1k chrm 203 151 2552 2605 C 53 84.91 752 reject_low 10 ALIGNMENT 0 YS2-3j10.q1k chrm 82 133 4370 4369 F 52 0.00 1284 reject_low 3 ALIGNMENT 0 YS2-3j10.p1k chrm 154 203 81944 81943 F 50 0.00 752 reject_bad_break 0 ALIGNMENT 0 YS2-3j10.p1k chrm 150 62 57324 57323 C 89 0.00 752 reject_low 4,8 ALIGNMENT 70 YS2-3j10.q1k chrm 114 4 30131 30240 C 111 90.99 1284 reject_low 6 ALIGNMENT 0 YS2-3j11.q1k vc_7 53 54 5172 6360 C 0 0.00 674 reject_vc 8 ALIGNMENT 33 YS2-3j11.q1k vc_4 317 498 1879 2052 F 182 75.82 674 reject_vc 7 ALIGNMENT 31 YS2-3j11.q1k vc_7 391 316 4625 4697 C 76 82.89 674 reject_vc 8 ALIGNMENT 0 YS2-3j11.p1k chr03 554 537 52739 52738 C 18 0.00 554 accept 0 ALIGNMENT 203 YS2-3j11.q1k vc_4 391 1 5274 5654 C 391 86.45 674 reject_vc 3 ALIGNMENT 194 YS2-3j11.q1k vc_1 1 285 2689 2967 F 285 91.23 674 reject_vc 4 ALIGNMENT 139 YS2-3j11.q1k vc_7 285 53 4946 5172 C 233 88.84 674|0,1 reject_vc 8 ALIGNMENT 214 YS2-3j11.q1k vc_5 1 498 2556 3036 F 498 83.53 674 reject_vc 1 ALIGNMENT 478 YS2-3j11.p1k chr03 536 37 52738 53237 C 500 99.00 554 accept 0 ALIGNMENT 194 YS2-3j11.q1k vc_2 1 285 2322 2600 F 285 91.23 674 reject_vc 5 ALIGNMENT 210 YS2-3j11.q1k vc_7 391 1 2191 2569 C 391 86.96 674 reject_vc 2 ALIGNMENT 51 YS2-3j11.q1k vc_7 54 3 6360 6411 C 52 100.00 674|1,0 reject_vc 8 ALIGNMENT 0 YS2-3j11.q1k vc_7 315 286 4698 4945 C 30 0.00 674 reject_vc 8 ALIGNMENT 194 YS2-3j11.q1k vc_3 1 285 2689 2967 F 285 91.23 674 reject_vc 6 ALIGNMENT 41 YS2-3j12.q1k vc_3 660 620 2472 2512 C 41 100.00 1401 reject_low 13 ALIGNMENT 0 YS2-3j12.q1k vc_4 62 619 5831 5830 F 558 0.00 1401 reject_low 8 ALIGNMENT 0 YS2-3j12.q1k vc_4 822 1151 288 1883 F 330 0.00 1401 reject_low 9 ALIGNMENT 0 YS2-3j12.p1k chr13 624 642 579249 579248 F 19 0.00 642 accept_chi 0 ALIGNMENT 0 YS2-3j12.q1k vc_3 785 661 2473 2472 C 125 0.00 1401 reject_low 13 ALIGNMENT 0 YS2-3j12.q1k vc_7 659 62 2728 2727 C 598 0.00 1401 reject_low 4 ALIGNMENT 159 YS2-3j12.q1k vc_4 660 821 6353 6514 F 162 100.00 1401|1,0 reject_low 8 ALIGNMENT 41 YS2-3j12.q1k vc_2 660 620 2105 2145 C 41 100.00 1401 reject_low 12 ALIGNMENT 0 YS2-3j12.q1k vc_4 661 660 5872 6353 F 0 0.00 1401 reject_low 8 ALIGNMENT 0 YS2-3j12.q1k vc_3 619 62 2513 2512 C 558 0.00 1401 reject_low 13 ALIGNMENT 280 YS2-3j12.q1k vc_4 1198 660 5295 5812 C 539 87.20 1401 reject_low 3 ALIGNMENT 0 YS2-3j12.q1k vc_1 785 661 2473 2472 C 125 0.00 1401 reject_low 11 ALIGNMENT 159 YS2-3j12.q1k vc_4 660 821 126 287 F 162 100.00 1401 reject_low 9 ALIGNMENT 0 YS2-3j12.q1k vc_3 62 659 2531 2530 F 598 0.00 1401 reject_low 7 ALIGNMENT 0 YS2-3j12.q1k vc_7 661 785 13562 13561 F 125 0.00 1401 reject_low 15 ALIGNMENT 0 YS2-3j12.q1k vc_5 785 661 5026 5025 C 125 0.00 1401 reject_low 14 ALIGNMENT 552 YS2-3j12.q1k chr13 619 30 578661 579249 C 590 99.32 1401 accept_chi 1 ALIGNMENT 41 YS2-3j12.q1k vc_1 660 620 2472 2512 C 41 100.00 1401 reject_low 11 ALIGNMENT 0 YS2-3j12.q1k vc_2 62 659 2164 2163 F 598 0.00 1401 reject_low 6 ALIGNMENT 36 YS2-3j12.q1k vc_5 657 622 1 36 C 36 100.00 1401 reject_low 16 ALIGNMENT 0 YS2-3j12.q1k vc_5 621 62 37 36 C 560 0.00 1401 reject_low 16 ALIGNMENT 0 YS2-3j12.q1k vc_4 659 62 1535 1534 C 598 0.00 1401 reject_low 10 ALIGNMENT 0 YS2-3j12.q1k vc_5 785 658 2 1 C 128 0.00 1401 reject_low 16 ALIGNMENT 282 YS2-3j12.q1k vc_5 660 1198 2398 2913 F 539 87.01 1401 reject_low 2 ALIGNMENT 0 YS2-3j12.q1k vc_1 62 659 2531 2530 F 598 0.00 1401 reject_low 5 ALIGNMENT 0 YS2-3j12.q1k vc_7 62 622 13525 13524 F 561 0.00 1401 reject_low 15 ALIGNMENT 275 YS2-3j12.q1k vc_7 1173 660 2237 2727 C 514 87.74 1401 reject_low 4 ALIGNMENT 270 YS2-3j12.q1k vc_2 660 1109 2164 2594 F 450 89.78 1401 reject_low 6 ALIGNMENT 0 YS2-3j12.q1k vc_5 62 659 2398 2397 F 598 0.00 1401 reject_low 2 ALIGNMENT 0 YS2-3j12.q1k vc_2 619 62 2146 2145 C 558 0.00 1401 reject_low 12 ALIGNMENT 0 YS2-3j12.q1k vc_4 659 62 5813 5812 C 598 0.00 1401 reject_low 3 ALIGNMENT 87 YS2-3j12.q1k vc_4 748 660 1446 1534 C 89 100.00 1401 reject_low 10 ALIGNMENT 41 YS2-3j12.q1k vc_4 620 660 5831 5871 F 41 100.00 1401 reject_low 8 ALIGNMENT 270 YS2-3j12.q1k vc_1 660 1109 2531 2961 F 450 89.78 1401 reject_low 5 ALIGNMENT 24 YS2-3j12.q1k vc_4 1152 1198 1884 1929 F 47 85.11 1401 reject_low 9 ALIGNMENT 38 YS2-3j12.q1k vc_7 623 660 13525 13562 F 38 100.00 1401 reject_low 15 ALIGNMENT 0 YS2-3j12.q1k vc_4 785 749 1447 1446 C 37 0.00 1401 reject_low 10 ALIGNMENT 0 YS2-3j12.q1k vc_4 62 659 126 125 F 598 0.00 1401 reject_low 9 ALIGNMENT 0 YS2-3j12.q1k chr13 785 620 578662 578661 C 166 0.00 1401 accept_chi 1 ALIGNMENT 558 YS2-3j12.p1k chr13 34 623 578661 579249 F 590 99.66 642 accept_chi 0 ALIGNMENT 270 YS2-3j12.q1k vc_3 660 1109 2531 2961 F 450 89.78 1401 reject_low 7 ALIGNMENT 0 YS2-3j12.q1k vc_5 621 62 5064 5063 C 560 0.00 1401 reject_low 14 ALIGNMENT 0 YS2-3j12.q1k vc_2 785 661 2106 2105 C 125 0.00 1401 reject_low 12 ALIGNMENT 39 YS2-3j12.q1k vc_5 660 622 5025 5063 C 39 100.00 1401 reject_low 14 ALIGNMENT 0 YS2-3j12.q1k vc_1 619 62 2513 2512 C 558 0.00 1401 reject_low 11 ALIGNMENT 824 YS2-3j14.q1k chr02 1081 33 244898 245937 C 1049 94.85 1354 accept 0 ALIGNMENT 873 YS2-3j16.q1k chr05 1100 26 525322 526380 C 1075 95.07 1347 accept 0 ALIGNMENT 838 YS2-3j17.q1k chr12 1015 26 826354 827331 C 990 96.26 1332 accept 0 ALIGNMENT 855 YS2-3j18.p1k chr04 1010 28 643766 644750 C 983 95.73 1112 accept 0 ALIGNMENT 875 YS2-3j18.q1k chr04 26 1099 642977 644060 F 1074 95.62 1280 accept 0 ALIGNMENT 236 YS2-3j20.p1k vc_7 1 378 456 832 F 378 88.10 470 reject_low 1 ALIGNMENT 295 YS2-3j20.q1k vc_2 1 303 2322 2624 F 303 99.34 828 reject_low 9 ALIGNMENT 241 YS2-3j20.q1k vc_7 303 53 4922 5172 C 251 98.80 828|0,1 reject_low 12 ALIGNMENT 295 YS2-3j20.q1k vc_1 1 303 2689 2991 F 303 99.34 828 reject_low 8 ALIGNMENT 236 YS2-3j20.p1k vc_7 1 378 13918 14294 F 378 88.10 470 reject_low 6 ALIGNMENT 242 YS2-3j20.p1k vc_5 378 1 4293 4669 C 378 88.36 470 reject_vc 0 ALIGNMENT 59 YS2-3j20.q1k vc_4 304 238 46 112 C 67 97.01 828 reject_low 13 ALIGNMENT 242 YS2-3j20.p1k vc_2 378 1 1373 1749 C 378 88.36 470 reject_low 3 ALIGNMENT 0 YS2-3j20.q1k vc_7 53 54 5172 6360 C 0 0.00 828 reject_low 12 ALIGNMENT 242 YS2-3j20.p1k vc_6 1 378 3712 4088 F 378 88.62 470 reject_low 5 ALIGNMENT 0 YS2-3j20.q1k vc_7 304 304 4700 4921 C 1 0.00 828 reject_low 12 ALIGNMENT 242 YS2-3j20.p1k vc_3 378 1 1373 1749 C 378 88.36 470 reject_low 4 ALIGNMENT 78 YS2-3j20.q1k vc_7 420 305 4583 4699 C 116 90.52 828 reject_low 12 ALIGNMENT 0 YS2-3j20.q1k vc_4 237 62 6340 6339 C 176 0.00 828 reject_low 14 ALIGNMENT 59 YS2-3j20.q1k vc_4 238 304 1548 1614 F 67 97.01 828 reject_low 11 ALIGNMENT 0 YS2-3j20.q1k vc_4 305 307 1615 1878 F 3 0.00 828 reject_low 11 ALIGNMENT 0 YS2-3j20.q1k vc_4 237 62 113 112 C 176 0.00 828 reject_low 13 ALIGNMENT 454 YS2-3j20.q1k vc_7 597 1 1978 2569 C 597 93.13 828 reject_low 1 ALIGNMENT 295 YS2-3j20.q1k vc_3 1 303 2689 2991 F 303 99.34 828 reject_low 10 ALIGNMENT 0 YS2-3j20.q1k vc_4 62 237 1548 1547 F 176 0.00 828 reject_low 11 ALIGNMENT 242 YS2-3j20.p1k vc_1 378 1 1373 1749 C 378 88.36 470 reject_low 2 ALIGNMENT 59 YS2-3j20.q1k vc_4 304 238 6273 6339 C 67 97.01 828 reject_low 14 ALIGNMENT 51 YS2-3j20.q1k vc_7 54 3 6360 6411 C 52 100.00 828|1,0 reject_low 12 ALIGNMENT 170 YS2-3j20.q1k vc_4 308 662 1879 2224 F 355 85.63 828 reject_low 11 ALIGNMENT 369 YS2-3j20.q1k vc_4 420 1 5232 5654 C 420 96.43 828 reject_low 7 ALIGNMENT 475 YS2-3j20.q1k vc_5 1 662 2556 3208 F 662 91.99 828 reject_vc 0 ALIGNMENT 79 YS2-3j21.q1k vc_7 424 305 4583 4699 C 120 90.83 751 reject_low 11 ALIGNMENT 237 YS2-3j21.q1k vc_7 302 53 4923 5172 C 250 98.40 751|0,1 reject_low 11 ALIGNMENT 364 YS2-3j21.q1k vc_4 424 1 5232 5654 C 424 95.99 751 reject_low 7 ALIGNMENT 56 YS2-3j21.q1k vc_4 302 238 48 112 C 65 96.92 751 reject_low 13 ALIGNMENT 133 YS2-3j21.p1k vc_5 245 1 4429 4669 C 245 85.71 359 reject_vc 0 ALIGNMENT 292 YS2-3j21.q1k vc_3 1 302 2689 2990 F 302 99.01 751 reject_low 10 ALIGNMENT 292 YS2-3j21.q1k vc_1 1 302 2689 2990 F 302 99.01 751 reject_low 8 ALIGNMENT 0 YS2-3j21.q1k vc_7 304 303 4700 4922 C 2 0.00 751 reject_low 11 ALIGNMENT 0 YS2-3j21.q1k vc_4 237 62 113 112 C 176 0.00 751 reject_low 13 ALIGNMENT 133 YS2-3j21.p1k vc_2 245 1 1509 1749 C 245 85.71 359 reject_low 3 ALIGNMENT 51 YS2-3j21.q1k vc_7 54 3 6360 6411 C 52 100.00 751|1,0 reject_low 11 ALIGNMENT 292 YS2-3j21.q1k vc_2 1 302 2322 2623 F 302 99.01 751 reject_low 9 ALIGNMENT 0 YS2-3j21.q1k vc_4 303 310 1613 1881 F 8 0.00 751 reject_low 12 ALIGNMENT 0 YS2-3j21.q1k vc_4 62 237 1548 1547 F 176 0.00 751 reject_low 12 ALIGNMENT 56 YS2-3j21.q1k vc_4 302 238 6275 6339 C 65 96.92 751 reject_low 14 ALIGNMENT 133 YS2-3j21.p1k vc_3 245 1 1509 1749 C 245 85.71 359 reject_low 4 ALIGNMENT 133 YS2-3j21.p1k vc_7 1 245 456 696 F 245 85.71 359 reject_vc 1 ALIGNMENT 124 YS2-3j21.q1k vc_4 311 606 1882 2167 F 296 83.78 751 reject_low 12 ALIGNMENT 56 YS2-3j21.q1k vc_4 238 302 1548 1612 F 65 96.92 751 reject_low 12 ALIGNMENT 133 YS2-3j21.p1k vc_1 245 1 1509 1749 C 245 85.71 359 reject_low 2 ALIGNMENT 0 YS2-3j21.q1k vc_7 53 54 5172 6360 C 0 0.00 751 reject_low 11 ALIGNMENT 133 YS2-3j21.p1k vc_7 1 245 13918 14158 F 245 85.71 359 reject_low 6 ALIGNMENT 133 YS2-3j21.p1k vc_6 1 245 3712 3952 F 245 85.71 359 reject_low 5 ALIGNMENT 0 YS2-3j21.q1k vc_4 237 62 6340 6339 C 176 0.00 751 reject_low 14 ALIGNMENT 422 YS2-3j21.q1k vc_7 606 1 1974 2569 C 606 91.25 751 reject_vc 1 ALIGNMENT 422 YS2-3j21.q1k vc_5 1 606 2556 3151 F 606 91.25 751 reject_vc 0 ALIGNMENT 328 YS2-3j23.p1k chr14 651 92 304615 305182 C 560 86.43 844 accept 0 ALIGNMENT 865 YS2-3j23.q1k chr14 31 1039 303156 304163 F 1009 96.23 1227 accept 0 ALIGNMENT 938 YS2-3k01.p1k chr03 31 1068 184428 185459 F 1038 97.88 1083 accept 0 ALIGNMENT 774 YS2-3k01.q1k chr03 908 29 186913 187792 C 880 97.16 1302 accept 0 ALIGNMENT 500 YS2-3k02.q1k chr11 40 944 1307 2231 F 905 86.19 1360 reject_low 11 ALIGNMENT 0 YS2-3k02.q1k chr03 723 62 290194 290193 C 662 0.00 1360 reject_low 20 ALIGNMENT 0 YS2-3k02.q1k chr05 531 62 64091 64090 C 470 0.00 1360 reject_low 15 ALIGNMENT 308 YS2-3k02.q1k chr07 909 410 1080297 1080790 C 500 88.20 1360 reject_low 14 ALIGNMENT 0 YS2-3k02.q1k chr07 409 62 1080791 1080790 C 348 0.00 1360 reject_low 14 ALIGNMENT 0 YS2-3k02.q1k chr15 191 62 1083559 1083558 C 130 0.00 1360 reject_low 21 ALIGNMENT 0 YS2-3k02.q1k chr09 465 62 434363 434362 C 404 0.00 1360 accept 0 ALIGNMENT 318 YS2-3k02.q1k chr02 909 410 809036 809534 C 500 88.80 1360 reject_low 13 ALIGNMENT 285 YS2-3k02.q1k chr05 909 532 63713 64090 C 378 92.06 1360 reject_low 15 ALIGNMENT 208 YS2-3k02.q1k chr15 954 340 1082775 1083396 C 615 79.67 1360 reject_low 21 ALIGNMENT 0 YS2-3k02.p1k chr07 727 584 9582 9581 C 144 0.00 1083 reject_low 1 ALIGNMENT 0 YS2-3k02.q1k chr03 399 62 308300 308299 C 338 0.00 1360 reject_low 17 ALIGNMENT 169 YS2-3k02.q1k chr12 544 834 222701 222991 F 291 86.25 1360 reject_low 19 ALIGNMENT 0 YS2-3k02.q1k chr13 339 62 923203 923202 C 278 0.00 1360 reject_low 16 ALIGNMENT 336 YS2-3k02.q1k chr07 439 1008 6195 6760 F 570 87.54 1360 reject_low 1 ALIGNMENT 580 YS2-3k02.q1k chr04 909 45 1523217 1524097 C 865 89.83 1360 reject_low 10 ALIGNMENT 318 YS2-3k02.q1k chr08 395 914 11795 12303 F 520 88.85 1360 reject_low 12 ALIGNMENT 659 YS2-3k02.q1k chr15 40 957 11052 11972 F 918 91.61 1360 reject_low 3 ALIGNMENT 0 YS2-3k02.q1k chr12 62 543 222701 222700 F 482 0.00 1360 reject_low 19 ALIGNMENT 0 YS2-3k02.q1k chr02 409 62 809535 809534 C 348 0.00 1360 reject_low 13 ALIGNMENT 220 YS2-3k02.q1k chr03 915 400 307776 308299 C 516 82.17 1360 reject_low 17 ALIGNMENT 621 YS2-3k02.q1k chr10 38 954 8267 9197 F 917 90.08 1360 reject_low 8 ALIGNMENT 0 YS2-3k02.q1k chr08 62 394 11795 11794 F 333 0.00 1360 reject_low 12 ALIGNMENT 653 YS2-3k02.q1k chr12 1002 40 1062813 1063775 C 963 90.55 1360 reject_low 2 ALIGNMENT 677 YS2-3k02.q1k chr14 915 38 781897 782779 C 878 93.28 1360 reject_low 4 ALIGNMENT 0 YS2-3k02.q1k chr07 62 438 6195 6194 F 377 0.00 1360 reject_low 1 ALIGNMENT 47 YS2-3k02.q1k chr03 811 724 290107 290193 C 88 85.23 1360 reject_low 20 ALIGNMENT 203 YS2-3k02.q1k chr13 939 340 922595 923202 C 600 79.83 1360 reject_low 16 ALIGNMENT 648 YS2-3k02.q1k chr02 45 915 7112 7989 F 871 92.42 1360 reject_low 6 ALIGNMENT 205 YS2-3k02.q1k chr09 944 466 433876 434362 C 479 82.05 1360 accept 0 ALIGNMENT 0 YS2-3k02.q1k chr01 62 507 176631 176630 F 446 0.00 1360 reject_low 18 ALIGNMENT 0 YS2-3k02.q1k chr15 339 222 1083397 1083528 C 118 0.00 1360 reject_low 21 ALIGNMENT 624 YS2-3k02.q1k chr09 38 954 8284 9214 F 917 90.19 1360 reject_low 7 ALIGNMENT 674 YS2-3k02.q1k chr12 38 915 12584 13466 F 878 93.17 1360 reject_low 5 ALIGNMENT 857 YS2-3k02.p1k chr09 35 1034 430253 431245 F 1000 96.40 1083 accept 0 ALIGNMENT 179 YS2-3k02.q1k chr01 508 904 176631 177031 F 397 82.62 1360 reject_low 18 ALIGNMENT 587 YS2-3k02.q1k chr01 38 954 1301 2228 F 917 88.99 1360 reject_low 9 ALIGNMENT 0 YS2-3k02.p1k chr07 264 62 9896 9895 C 203 0.00 1083 reject_low 1 ALIGNMENT 138 YS2-3k02.p1k chr07 583 265 9581 9895 C 319 82.45 1083 reject_low 1 ALIGNMENT 20 YS2-3k02.q1k chr15 221 192 1083529 1083558 C 30 93.33 1360 reject_low 21 ALIGNMENT 873 YS2-3k03.q1k chr15 1096 32 985566 986620 C 1065 94.93 1315 accept 0 ALIGNMENT 899 YS2-3k03.p1k chr15 32 1111 982011 983102 F 1080 95.56 1111 accept 0 ALIGNMENT 306 YS2-3k04.p1k chrm 237 623 33814 34200 F 387 100.00 1156|3,6 accept 0 ALIGNMENT 0 YS2-3k04.p1k chrm 651 62 52381 52380 C 590 0.00 1156 reject_low 3 ALIGNMENT 56 YS2-3k04.p1k chrm 730 624 9460 9568 C 107 87.85 1156 reject_low 2 ALIGNMENT 36 YS2-3k04.p1k chrm 660 703 52772 52815 F 44 97.73 1156 reject_low 6 ALIGNMENT 0 YS2-3k04.p1k chrm 760 733 52299 52298 C 28 0.00 1156 reject_low 3 ALIGNMENT 0 YS2-3k04.p1k chrm 62 659 52772 52771 F 598 0.00 1156 reject_low 6 ALIGNMENT 0 YS2-3k04.p1k chrm 623 62 9569 9568 C 562 0.00 1156 reject_low 2 ALIGNMENT 39 YS2-3k04.p1k chrm 701 638 33449 33510 C 64 90.62 1156 reject_low 1 ALIGNMENT 44 YS2-3k04.q1k chrm 515 579 33439 33502 F 65 92.31 1458 reject_low 1 ALIGNMENT 144 YS2-3k04.p1k chrm 28 241 33560 33772 F 214 98.60 1156|0,2 accept 0 ALIGNMENT 47 YS2-3k04.p1k chrm 656 717 83050 83112 F 62 93.55 1156 reject_low 4 ALIGNMENT 0 YS2-3k04.p1k chrm 637 62 33511 33510 C 576 0.00 1156 reject_low 1 ALIGNMENT 0 YS2-3k04.p1k chrm 718 760 83112 83111 F 43 0.00 1156 reject_low 4 ALIGNMENT 296 YS2-3k04.p1k chrm 611 1066 34238 34684 F 456 93.42 1156|7,0 accept 0 ALIGNMENT 0 YS2-3k04.p1k chrm 760 731 9461 9460 C 30 0.00 1156 reject_low 2 ALIGNMENT 0 YS2-3k04.p1k chrm 62 655 83050 83049 F 594 0.00 1156 reject_low 4 ALIGNMENT 0 YS2-3k04.p1k chrm 655 62 71260 71259 C 594 0.00 1156 reject_low 5 ALIGNMENT 0 YS2-3k04.p1k chrm 240 239 33771 33816 F 0 0.00 1156 accept 0 ALIGNMENT 0 YS2-3k04.p1k chrm 760 702 33450 33449 C 59 0.00 1156 reject_low 1 ALIGNMENT 0 YS2-3k04.q1k chrm 62 514 33439 33438 F 453 0.00 1458 reject_low 1 ALIGNMENT 0 YS2-3k04.p1k chrm 618 617 34195 34244 F 0 0.00 1156 accept 0 ALIGNMENT 0 YS2-3k04.q1k chrm 580 655 33502 33501 F 76 0.00 1458 reject_low 1 ALIGNMENT 578 YS2-3k04.q1k chrm 782 26 34721 35477 C 757 97.62 1458 accept 0 ALIGNMENT 0 YS2-3k04.p1k chrm 704 760 52815 52814 F 57 0.00 1156 reject_low 6 ALIGNMENT 52 YS2-3k04.p1k chrm 732 652 52298 52380 C 81 91.36 1156 reject_low 3 ALIGNMENT 0 YS2-3k04.p1k chrm 760 707 71210 71209 C 54 0.00 1156 reject_low 5 ALIGNMENT 49 YS2-3k04.p1k chrm 706 656 71209 71259 C 51 100.00 1156 reject_low 5 ALIGNMENT 485 YS2-3k05.p1k chr14 733 28 485113 485812 C 706 91.50 1329 accept 0 ALIGNMENT 906 YS2-3k05.q1k chr14 37 1133 480421 481509 F 1097 95.26 1353 accept 0 ALIGNMENT 97 YS2-3k06.q1k vc_7 1031 816 2519 2727 C 216 84.72 1407 reject_low 6 ALIGNMENT 696 YS2-3k06.q1k chr05 31 775 151181 151925 F 745 99.33 1407 accept 0 ALIGNMENT 68 YS2-3k06.q1k vc_4 901 816 1448 1534 C 86 94.19 1407 reject_low 8 ALIGNMENT 0 YS2-3k06.q1k vc_5 62 815 2398 2397 F 754 0.00 1407 reject_low 5 ALIGNMENT 97 YS2-3k06.q1k vc_5 816 1107 2398 2679 F 292 81.51 1407 reject_low 5 ALIGNMENT 0 YS2-3k06.q1k vc_3 62 815 2531 2530 F 754 0.00 1407 reject_low 4 ALIGNMENT 0 YS2-3k06.q1k vc_4 817 816 5872 6353 F 0 0.00 1407 reject_low 15 ALIGNMENT 0 YS2-3k06.q1k vc_4 815 62 1535 1534 C 754 0.00 1407 reject_low 8 ALIGNMENT 29 YS2-3k06.q1k vc_5 813 777 1 36 C 37 94.59 1407 reject_low 14 ALIGNMENT 0 YS2-3k06.q1k vc_4 62 815 126 125 F 754 0.00 1407 reject_low 7 ALIGNMENT 0 YS2-3k06.q1k vc_2 775 62 2145 2144 C 714 0.00 1407 reject_low 10 ALIGNMENT 0 YS2-3k06.q1k vc_1 62 815 2531 2530 F 754 0.00 1407 reject_low 2 ALIGNMENT 32 YS2-3k06.q1k vc_3 816 776 2472 2511 C 41 95.12 1407 reject_low 11 ALIGNMENT 0 YS2-3k06.q1k vc_7 815 62 2728 2727 C 754 0.00 1407 reject_low 6 ALIGNMENT 82 YS2-3k06.q1k vc_4 816 960 126 269 F 145 87.59 1407 reject_low 7 ALIGNMENT 0 YS2-3k06.q1k vc_5 776 62 5064 5063 C 715 0.00 1407 reject_low 12 ALIGNMENT 31 YS2-3k06.q1k vc_7 778 816 13525 13562 F 39 94.87 1407 reject_low 13 ALIGNMENT 98 YS2-3k06.q1k vc_4 1107 816 5529 5812 C 292 81.51 1407 reject_low 1 ALIGNMENT 0 YS2-3k06.q1k vc_1 775 62 2512 2511 C 714 0.00 1407 reject_low 9 ALIGNMENT 97 YS2-3k06.q1k vc_2 816 1107 2164 2445 F 292 81.51 1407 reject_low 3 ALIGNMENT 32 YS2-3k06.q1k vc_4 776 816 5832 5871 F 41 95.12 1407 reject_low 15 ALIGNMENT 0 YS2-3k06.q1k vc_4 62 775 5832 5831 F 714 0.00 1407 reject_low 15 ALIGNMENT 0 YS2-3k06.q1k vc_3 775 62 2512 2511 C 714 0.00 1407 reject_low 11 ALIGNMENT 0 YS2-3k06.q1k vc_2 62 815 2164 2163 F 754 0.00 1407 reject_low 3 ALIGNMENT 82 YS2-3k06.q1k vc_4 816 960 6353 6496 F 145 87.59 1407|1,0 reject_low 15 ALIGNMENT 0 YS2-3k06.q1k vc_7 62 777 13525 13524 F 716 0.00 1407 reject_low 13 ALIGNMENT 32 YS2-3k06.q1k vc_1 816 776 2472 2511 C 41 95.12 1407 reject_low 9 ALIGNMENT 32 YS2-3k06.q1k vc_5 816 777 5025 5063 C 40 95.00 1407 reject_low 12 ALIGNMENT 97 YS2-3k06.q1k vc_3 816 1107 2531 2812 F 292 81.51 1407 reject_low 4 ALIGNMENT 0 YS2-3k06.q1k vc_5 776 62 37 36 C 715 0.00 1407 reject_low 14 ALIGNMENT 32 YS2-3k06.q1k vc_2 816 776 2105 2144 C 41 95.12 1407 reject_low 10 ALIGNMENT 97 YS2-3k06.q1k vc_1 816 1107 2531 2812 F 292 81.51 1407 reject_low 2 ALIGNMENT 0 YS2-3k06.q1k vc_4 815 62 5813 5812 C 754 0.00 1407 reject_low 1 ALIGNMENT 513 YS2-3k06.p1k chr05 689 26 151248 151925 C 664 94.58 1214 accept 0 ALIGNMENT 737 YS2-3k09.q1k chr08 27 995 35709 36662 F 969 94.01 1313 accept 0 ALIGNMENT 930 YS2-3k09.p1k chr08 1153 30 39036 40164 C 1124 94.66 1153 accept 0 ALIGNMENT 0 YS2-3k09.q1k chr12 341 643 48628 48627 F 303 0.00 1313 reject_low 1 ALIGNMENT 259 YS2-3k09.q1k chr12 27 340 48314 48628 F 314 94.90 1313 reject_low 1 ALIGNMENT 41 YS2-3k10.q1k vc_3 679 639 2472 2512 C 41 100.00 1325 reject_low 14 ALIGNMENT 0 YS2-3k10.q1k vc_5 62 678 2398 2397 F 617 0.00 1325 reject_low 5 ALIGNMENT 0 YS2-3k10.q1k vc_3 62 678 2531 2530 F 617 0.00 1325 reject_low 4 ALIGNMENT 0 YS2-3k10.q1k vc_4 678 62 5813 5812 C 617 0.00 1325 reject_low 7 ALIGNMENT 216 YS2-3k10.q1k vc_7 1028 679 2379 2727 C 350 88.29 1325 reject_low 6 ALIGNMENT 0 YS2-3k10.q1k vc_3 638 62 2513 2512 C 577 0.00 1325 reject_low 14 ALIGNMENT 40 YS2-3k10.q1k vc_7 887 838 6362 6411 C 50 94.00 1325 reject_low 11 ALIGNMENT 41 YS2-3k10.q1k vc_2 679 639 2105 2145 C 41 100.00 1325 reject_low 13 ALIGNMENT 595 YS2-3k10.p1k chr15 29 644 182472 183087 F 616 99.84 662 accept_chi 0 ALIGNMENT 216 YS2-3k10.q1k vc_1 679 1028 2531 2879 F 350 88.29 1325 reject_low 2 ALIGNMENT 0 YS2-3k10.q1k vc_2 638 62 2146 2145 C 577 0.00 1325 reject_low 13 ALIGNMENT 216 YS2-3k10.q1k vc_3 679 1028 2531 2879 F 350 88.29 1325 reject_low 4 ALIGNMENT 0 YS2-3k10.q1k vc_1 62 678 2531 2530 F 617 0.00 1325 reject_low 2 ALIGNMENT 0 YS2-3k10.q1k vc_4 62 678 126 125 F 617 0.00 1325 reject_low 8 ALIGNMENT 0 YS2-3k10.q1k vc_1 638 62 2513 2512 C 577 0.00 1325 reject_low 12 ALIGNMENT 39 YS2-3k10.q1k vc_5 679 641 5025 5063 C 39 100.00 1325 reject_low 15 ALIGNMENT 0 YS2-3k10.q1k vc_7 62 641 13525 13524 F 580 0.00 1325 reject_low 17 ALIGNMENT 0 YS2-3k10.q1k vc_5 640 62 37 36 C 579 0.00 1325 reject_low 18 ALIGNMENT 0 YS2-3k10.q1k vc_5 640 62 5064 5063 C 579 0.00 1325 reject_low 15 ALIGNMENT 211 YS2-3k10.q1k vc_4 1028 679 5462 5812 C 350 88.00 1325 reject_low 7 ALIGNMENT 216 YS2-3k10.q1k vc_2 679 1028 2164 2512 F 350 88.29 1325 reject_low 3 ALIGNMENT 41 YS2-3k10.q1k vc_4 639 679 5831 5871 F 41 100.00 1325 reject_low 9 ALIGNMENT 87 YS2-3k10.q1k vc_4 767 679 1446 1534 C 89 100.00 1325 reject_low 10 ALIGNMENT 38 YS2-3k10.q1k vc_7 642 679 63 100 F 38 100.00 1325 reject_low 16 ALIGNMENT 0 YS2-3k10.q1k vc_4 678 62 1535 1534 C 617 0.00 1325 reject_low 10 ALIGNMENT 0 YS2-3k10.q1k vc_2 62 678 2164 2163 F 617 0.00 1325 reject_low 3 ALIGNMENT 0 YS2-3k10.q1k vc_7 678 62 2728 2727 C 617 0.00 1325 reject_low 6 ALIGNMENT 0 YS2-3k10.q1k vc_4 62 638 5831 5830 F 577 0.00 1325 reject_low 9 ALIGNMENT 0 YS2-3k10.p1k chr15 645 662 183087 183086 F 18 0.00 662 accept_chi 0 ALIGNMENT 0 YS2-3k10.q1k vc_4 680 679 5872 6353 F 0 0.00 1325 reject_low 9 ALIGNMENT 41 YS2-3k10.q1k vc_1 679 639 2472 2512 C 41 100.00 1325 reject_low 12 ALIGNMENT 141 YS2-3k10.q1k vc_4 679 836 6353 6510 F 158 97.47 1325|1,0 reject_low 9 ALIGNMENT 141 YS2-3k10.q1k vc_4 679 836 126 283 F 158 97.47 1325 reject_low 8 ALIGNMENT 38 YS2-3k10.q1k vc_7 642 679 13525 13562 F 38 100.00 1325 reject_low 17 ALIGNMENT 0 YS2-3k10.q1k vc_7 837 62 6412 6411 C 776 0.00 1325 reject_low 11 ALIGNMENT 0 YS2-3k10.q1k chr15 690 639 182473 182472 C 52 0.00 1325 accept_chi 1 ALIGNMENT 0 YS2-3k10.q1k vc_7 62 641 63 62 F 580 0.00 1325 reject_low 16 ALIGNMENT 36 YS2-3k10.q1k vc_5 676 641 1 36 C 36 100.00 1325 reject_low 18 ALIGNMENT 590 YS2-3k10.q1k chr15 638 24 182472 183087 C 615 99.67 1325 accept_chi 1 ALIGNMENT 216 YS2-3k10.q1k vc_5 679 1028 2398 2746 F 350 88.29 1325 reject_low 5 ALIGNMENT 20 YS2-3k14.p1k chr16 114 136 406628 406650 F 23 95.65 1147 reject_low 1 ALIGNMENT 0 YS2-3k14.p1k chr16 62 113 406628 406627 F 52 0.00 1147 reject_low 1 ALIGNMENT 0 YS2-3k14.p1k chr16 137 507 406651 407054 F 371 0.00 1147 reject_low 1 ALIGNMENT 764 YS2-3k14.q1k chr02 936 27 607098 608001 C 910 96.70 1399 accept 0 ALIGNMENT 855 YS2-3k14.p1k chr02 27 1028 606172 607192 F 1002 95.81 1147 accept 0 ALIGNMENT 319 YS2-3k14.p1k chr16 508 968 407055 407524 F 461 89.37 1147 reject_low 1 ALIGNMENT 879 YS2-3k15.p1k chr05 39 1071 234690 235721 F 1033 96.13 1077 accept 0 ALIGNMENT 785 YS2-3k15.q1k chr05 962 27 238027 238969 C 936 96.26 1305 accept 0 ALIGNMENT 884 YS2-3k16.q1k chr06 1116 32 166069 167157 C 1085 95.12 1376 accept 0 ALIGNMENT 0 YS2-3k18.q1k vc_5 365 62 5064 5063 C 304 0.00 404 reject_low 11 ALIGNMENT 0 YS2-3k18.q1k vc_1 363 62 2513 2512 C 302 0.00 404 reject_low 8 ALIGNMENT 309 YS2-3k18.q1k chr12 29 364 675537 675871 F 336 99.11 404 accept 0 ALIGNMENT 41 YS2-3k18.q1k vc_1 404 364 2472 2512 C 41 100.00 404 reject_low 8 ALIGNMENT 231 YS2-3k18.p1k vc_6 1 384 3712 4090 F 384 88.28 425 reject_vc 5 ALIGNMENT 0 YS2-3k18.q1k vc_4 62 363 5831 5830 F 302 0.00 404 reject_low 10 ALIGNMENT 232 YS2-3k18.p1k vc_2 415 1 1342 1749 C 415 86.99 425 reject_vc 2 ALIGNMENT 39 YS2-3k18.q1k vc_5 404 366 5025 5063 C 39 100.00 404 reject_low 11 ALIGNMENT 228 YS2-3k18.p1k vc_7 1 384 13918 14296 F 384 88.02 425 reject_vc 7 ALIGNMENT 36 YS2-3k18.q1k vc_5 401 366 1 36 C 36 100.00 404 reject_low 13 ALIGNMENT 232 YS2-3k18.p1k vc_3 415 1 1342 1749 C 415 86.99 425 reject_vc 3 ALIGNMENT 232 YS2-3k18.p1k vc_5 415 1 4262 4669 C 415 86.99 425 reject_vc 4 ALIGNMENT 41 YS2-3k18.q1k vc_3 404 364 2472 2512 C 41 100.00 404 reject_low 9 ALIGNMENT 0 YS2-3k18.q1k vc_5 365 62 37 36 C 304 0.00 404 reject_low 13 ALIGNMENT 0 YS2-3k18.q1k vc_7 62 366 13525 13524 F 305 0.00 404 reject_low 12 ALIGNMENT 0 YS2-3k18.q1k vc_3 363 62 2513 2512 C 302 0.00 404 reject_low 9 ALIGNMENT 38 YS2-3k18.q1k vc_7 367 404 13525 13562 F 38 100.00 404 reject_low 12 ALIGNMENT 232 YS2-3k18.p1k vc_1 415 1 1342 1749 C 415 86.99 425 reject_vc 1 ALIGNMENT 228 YS2-3k18.p1k vc_7 1 384 456 834 F 384 88.02 425 reject_vc 6 ALIGNMENT 0 YS2-3k18.q1k chr12 365 404 675871 675870 F 40 0.00 404 accept 0 ALIGNMENT 41 YS2-3k18.q1k vc_4 364 404 5831 5871 F 41 100.00 404 reject_low 10 ALIGNMENT 852 YS2-3k19.q1k chr04 32 1012 925832 926798 F 981 96.74 1288 accept 0 ALIGNMENT 305 YS2-3k19.p1k chr04 572 165 929775 930177 C 408 93.87 1017 accept 0 ALIGNMENT 0 YS2-3k20.p1k vc_3 710 62 2106 2105 C 649 0.00 1076 reject_low 3 ALIGNMENT 81 YS2-3k20.p1k vc_3 918 711 1909 2105 C 208 83.65 1076 reject_low 3 ALIGNMENT 81 YS2-3k20.p1k vc_1 918 711 1909 2105 C 208 83.65 1076 reject_low 2 ALIGNMENT 598 YS2-3k20.p1k chr13 690 50 143624 144263 C 641 98.13 1076 accept_chi 1 ALIGNMENT 621 YS2-3k20.q1k chr13 38 680 143624 144265 F 643 99.84 680 accept_chi 0 ALIGNMENT 0 YS2-3k20.p1k vc_1 710 62 2106 2105 C 649 0.00 1076 reject_low 2 ALIGNMENT 760 YS2-3k21.q1k chr16 27 948 314540 315449 F 922 95.88 1238 accept 0 ALIGNMENT 723 YS2-3k21.p1k chr16 878 35 314934 315781 C 844 96.09 992 accept 0 ALIGNMENT 0 YS2-3k22.p1k vc_2 778 62 2106 2105 C 717 0.00 1130 reject_low 2 ALIGNMENT 0 YS2-3k22.p1k chrm 918 466 32233 32232 C 453 0.00 1130 reject_low 10 ALIGNMENT 0 YS2-3k22.p1k chrm 337 337 56673 56703 F 1 0.00 1130 reject_low 16 ALIGNMENT 0 YS2-3k22.p1k chrm 76 62 82723 82722 C 15 0.00 1130 reject_low 9 ALIGNMENT 0 YS2-3k22.p1k vc_5 778 62 5026 5025 C 717 0.00 1130 reject_low 5 ALIGNMENT 0 YS2-3k22.p1k vc_6 62 1005 3585 3584 F 944 0.00 1130 reject_low 8 ALIGNMENT 0 YS2-3k22.p1k chrm 918 469 44925 44924 C 450 0.00 1130 reject_low 14 ALIGNMENT 287 YS2-3k22.p1k vc_7 779 1128 13562 13910 F 350 94.00 1130 reject_low 7 ALIGNMENT 0 YS2-3k22.p1k vc_7 62 778 100 99 F 717 0.00 1130 reject_low 6 ALIGNMENT 287 YS2-3k22.p1k vc_2 1128 779 1757 2105 C 350 94.00 1130 reject_low 2 ALIGNMENT 0 YS2-3k22.p1k chrm 918 558 82240 82239 C 361 0.00 1130 reject_low 9 ALIGNMENT 0 YS2-3k22.p1k chrm 337 343 4155 4191 F 7 0.00 1130 reject_low 15 ALIGNMENT 287 YS2-3k22.p1k vc_3 1128 779 1757 2105 C 350 94.00 1130 reject_low 3 ALIGNMENT 0 YS2-3k22.p1k chrm 123 62 45301 45300 C 62 0.00 1130 reject_low 14 ALIGNMENT 0 YS2-3k22.p1k chrm 62 128 3947 3946 F 67 0.00 1130 reject_low 15 ALIGNMENT 287 YS2-3k22.p1k vc_5 1128 779 4677 5025 C 350 94.00 1130 reject_low 5 ALIGNMENT 82 YS2-3k22.p1k chrm 78 468 12398 12782 F 391 84.14 1130 reject_low 13 ALIGNMENT 0 YS2-3k22.p1k chrm 762 918 55134 55133 F 157 0.00 1130 accept 0 ALIGNMENT 97 YS2-3k22.p1k chrm 465 90 32232 32616 C 376 84.04 1130 reject_low 10 ALIGNMENT 0 YS2-3k22.p1k chrm 89 62 32617 32616 C 28 0.00 1130 reject_low 10 ALIGNMENT 38 YS2-3k22.p1k chrm 338 470 56704 56836 F 133 83.46 1130 reject_low 16 ALIGNMENT 0 YS2-3k22.p1k chrm 62 77 12398 12397 F 16 0.00 1130 reject_low 13 ALIGNMENT 92 YS2-3k22.p1k vc_6 1006 1128 3585 3704 F 123 93.50 1130 reject_low 8 ALIGNMENT 84 YS2-3k22.p1k chrm 557 77 82239 82722 C 481 83.16 1130 reject_low 9 ALIGNMENT 0 YS2-3k22.p1k chrm 62 98 56440 56439 F 37 0.00 1130 reject_low 16 ALIGNMENT 28 YS2-3k22.p1k vc_3 812 779 2438 2472 C 34 94.12 1130 reject_low 12 ALIGNMENT 42 YS2-3k22.p1k chrm 344 468 4192 4314 F 125 85.60 1130 reject_low 15 ALIGNMENT 37 YS2-3k22.p1k chrm 468 339 44924 45050 C 130 83.85 1130 reject_low 14 ALIGNMENT 299 YS2-3k22.q1k chrm 476 30 54689 55134 C 447 96.64 1430 accept 0 ALIGNMENT 0 YS2-3k22.p1k vc_1 778 62 2473 2472 C 717 0.00 1130 reject_low 11 ALIGNMENT 0 YS2-3k22.p1k vc_3 778 62 2473 2472 C 717 0.00 1130 reject_low 12 ALIGNMENT 66 YS2-3k22.p1k chrm 336 124 45084 45300 C 213 86.85 1130 reject_low 14 ALIGNMENT 287 YS2-3k22.p1k vc_1 1128 779 1757 2105 C 350 94.00 1130 reject_low 1 ALIGNMENT 287 YS2-3k22.p1k vc_7 779 1128 100 448 F 350 94.00 1130 reject_low 6 ALIGNMENT 0 YS2-3k22.p1k chrm 469 918 12782 12781 F 450 0.00 1130 reject_low 13 ALIGNMENT 0 YS2-3k22.p1k chrm 338 337 45051 45083 C 2 0.00 1130 reject_low 14 ALIGNMENT 0 YS2-3k22.p1k vc_1 778 62 2106 2105 C 717 0.00 1130 reject_low 1 ALIGNMENT 39 YS2-3k22.p1k chrm 99 336 56440 56672 F 238 82.77 1130 reject_low 16 ALIGNMENT 0 YS2-3k22.p1k vc_4 62 778 5871 5870 F 717 0.00 1130 reject_low 4 ALIGNMENT 0 YS2-3k22.p1k chrm 469 918 4314 4313 F 450 0.00 1130 reject_low 15 ALIGNMENT 0 YS2-3k22.p1k vc_1 918 813 2439 2438 C 106 0.00 1130 reject_low 11 ALIGNMENT 0 YS2-3k22.p1k vc_3 778 62 2106 2105 C 717 0.00 1130 reject_low 3 ALIGNMENT 531 YS2-3k22.p1k chrm 25 761 54400 55134 F 737 99.19 1130 accept 0 ALIGNMENT 0 YS2-3k22.p1k vc_3 918 813 2439 2438 C 106 0.00 1130 reject_low 12 ALIGNMENT 0 YS2-3k22.p1k chrm 471 918 56836 56835 F 448 0.00 1130 reject_low 16 ALIGNMENT 287 YS2-3k22.p1k vc_4 779 1128 5871 6219 F 350 94.00 1130 reject_low 4 ALIGNMENT 0 YS2-3k22.p1k vc_7 62 778 13562 13561 F 717 0.00 1130 reject_low 7 ALIGNMENT 50 YS2-3k22.p1k chrm 129 336 3947 4154 F 208 83.65 1130 reject_low 15 ALIGNMENT 28 YS2-3k22.p1k vc_1 812 779 2438 2472 C 34 94.12 1130 reject_low 11 ALIGNMENT 73 YS2-3k24.p1k chr04 99 26 1040219 1040292 C 74 100.00 1015 reject_low 1 ALIGNMENT 652 YS2-3k24.q1k chr15 892 4 103479 104367 C 889 92.13 1180 accept 0 ALIGNMENT 666 YS2-3k24.p1k chr15 98 993 99898 100795 F 896 92.41 1015 accept 0 ALIGNMENT 0 YS2-3k24.p1k chr04 583 100 1040220 1040219 C 484 0.00 1015 reject_low 1 ALIGNMENT 0 YS2-3k24.p1k chr15 62 97 99898 99897 F 36 0.00 1015 accept 0 ALIGNMENT 0 YS2-3l01.q1k chr02 62 302 240066 240065 F 241 0.00 1323 reject_low 3 ALIGNMENT 0 YS2-3l01.p1k chr02 857 661 240067 240066 C 197 0.00 934 reject_low 2 ALIGNMENT 0 YS2-3l01.q1k vc_2 62 971 2168 2167 F 910 0.00 1323 reject_low 4 ALIGNMENT 44 YS2-3l01.q1k vc_2 972 1130 2168 2328 F 159 78.62 1323 reject_low 4 ALIGNMENT 874 YS2-3l01.p1k chr04 934 36 451066 451964 C 899 99.67 934 accept_chi 1 ALIGNMENT 808 YS2-3l01.q1k chr04 30 909 451066 451945 F 880 98.18 1323 accept_chi 0 ALIGNMENT 196 YS2-3l01.p1k chr02 660 44 240066 240682 C 617 77.96 934 reject_low 2 ALIGNMENT 165 YS2-3l01.q1k chr02 303 788 240066 240550 F 486 78.81 1323 reject_low 3 ALIGNMENT 428 YS2-3l03.p1k chr16 217 890 594978 595648 F 674 89.02 1279 accept 0 ALIGNMENT 0 YS2-3l04.p1k chr10 329 348 60209 60208 F 20 0.00 348 accept 0 ALIGNMENT 281 YS2-3l04.p1k chr10 31 328 59912 60209 F 298 98.66 348 accept 0 ALIGNMENT 518 YS2-3l05.p1k chr13 32 684 866685 867351 F 653 93.42 1192 accept 0 ALIGNMENT 872 YS2-3l05.q1k chr13 1069 33 868152 869195 C 1037 95.47 1356 accept 0 ALIGNMENT 117 YS2-3l06.p1k chr09 189 35 362956 363110 C 155 94.84 208 accept 0 ALIGNMENT 0 YS2-3l06.p1k chr09 208 190 362957 362956 C 19 0.00 208 accept 0 ALIGNMENT 869 YS2-3l07.q1k chr07 37 1116 772392 773471 F 1080 94.81 1382 accept 0 ALIGNMENT 539 YS2-3l08.p1k chr01 33 642 67467 68071 F 610 98.20 661 accept 0 ALIGNMENT 346 YS2-3l08.q1k chr01 484 39 67633 68071 C 446 95.74 1840 accept 0 ALIGNMENT 0 YS2-3l08.p1k chr01 643 661 68071 68070 F 19 0.00 661 accept 0 ALIGNMENT 834 YS2-3l09.q1k chr16 34 1086 894658 895686 F 1053 95.63 1409 accept 0 ALIGNMENT 0 YS2-3l10.q1k vc_1 62 635 2531 2530 F 574 0.00 1349 reject_low 2 ALIGNMENT 0 YS2-3l10.q1k vc_3 62 635 2531 2530 F 574 0.00 1349 reject_low 4 ALIGNMENT 0 YS2-3l10.q1k vc_5 716 634 2 1 C 83 0.00 1349 reject_low 16 ALIGNMENT 555 YS2-3l10.p1k chr05 30 596 103162 103728 F 567 100.00 614 accept_chi 0 ALIGNMENT 0 YS2-3l10.q1k chr05 716 598 103163 103162 C 119 0.00 1349 accept_chi 1 ALIGNMENT 0 YS2-3l10.q1k vc_7 637 716 13562 13561 F 80 0.00 1349 reject_low 15 ALIGNMENT 256 YS2-3l10.q1k vc_7 1039 636 2323 2727 C 404 89.36 1349 reject_low 6 ALIGNMENT 0 YS2-3l10.q1k vc_7 62 598 13525 13524 F 537 0.00 1349 reject_low 15 ALIGNMENT 40 YS2-3l10.q1k vc_3 636 597 2472 2511 C 40 100.00 1349 reject_low 13 ALIGNMENT 40 YS2-3l10.q1k vc_2 636 597 2105 2144 C 40 100.00 1349 reject_low 12 ALIGNMENT 0 YS2-3l10.q1k vc_5 597 62 5064 5063 C 536 0.00 1349 reject_low 14 ALIGNMENT 0 YS2-3l10.p1k chr05 597 614 103728 103727 F 18 0.00 614 accept_chi 0 ALIGNMENT 256 YS2-3l10.q1k vc_5 636 1039 2398 2802 F 404 89.11 1349 reject_low 5 ALIGNMENT 256 YS2-3l10.q1k vc_2 636 1039 2164 2568 F 404 89.11 1349 reject_low 3 ALIGNMENT 249 YS2-3l10.q1k vc_4 1039 636 5406 5812 C 404 88.86 1349 reject_low 7 ALIGNMENT 0 YS2-3l10.q1k vc_4 62 596 5832 5831 F 535 0.00 1349 reject_low 9 ALIGNMENT 148 YS2-3l10.q1k vc_4 636 797 126 287 F 162 97.53 1349 reject_low 8 ALIGNMENT 0 YS2-3l10.q1k vc_4 635 62 5813 5812 C 574 0.00 1349 reject_low 7 ALIGNMENT 555 YS2-3l10.q1k chr05 597 31 103162 103728 C 567 100.00 1349 accept_chi 1 ALIGNMENT 82 YS2-3l10.q1k vc_4 722 636 1448 1534 C 87 98.85 1349 reject_low 10 ALIGNMENT 0 YS2-3l10.q1k vc_5 597 62 37 36 C 536 0.00 1349 reject_low 16 ALIGNMENT 36 YS2-3l10.q1k vc_5 633 598 1 36 C 36 100.00 1349 reject_low 16 ALIGNMENT 0 YS2-3l10.q1k vc_4 635 62 1535 1534 C 574 0.00 1349 reject_low 10 ALIGNMENT 38 YS2-3l10.q1k vc_7 599 636 13525 13562 F 38 100.00 1349 reject_low 15 ALIGNMENT 256 YS2-3l10.q1k vc_1 636 1039 2531 2935 F 404 89.11 1349 reject_low 2 ALIGNMENT 0 YS2-3l10.q1k vc_3 716 637 2473 2472 C 80 0.00 1349 reject_low 13 ALIGNMENT 0 YS2-3l10.q1k vc_5 716 637 5026 5025 C 80 0.00 1349 reject_low 14 ALIGNMENT 39 YS2-3l10.q1k vc_5 636 598 5025 5063 C 39 100.00 1349 reject_low 14 ALIGNMENT 0 YS2-3l10.q1k vc_5 62 635 2398 2397 F 574 0.00 1349 reject_low 5 ALIGNMENT 0 YS2-3l10.q1k vc_1 716 637 2473 2472 C 80 0.00 1349 reject_low 11 ALIGNMENT 0 YS2-3l10.q1k vc_2 596 62 2145 2144 C 535 0.00 1349 reject_low 12 ALIGNMENT 0 YS2-3l10.q1k vc_2 62 635 2164 2163 F 574 0.00 1349 reject_low 3 ALIGNMENT 0 YS2-3l10.q1k vc_4 637 636 5872 6353 F 0 0.00 1349 reject_low 9 ALIGNMENT 40 YS2-3l10.q1k vc_4 597 636 5832 5871 F 40 100.00 1349 reject_low 9 ALIGNMENT 0 YS2-3l10.q1k vc_4 62 635 126 125 F 574 0.00 1349 reject_low 8 ALIGNMENT 40 YS2-3l10.q1k vc_1 636 597 2472 2511 C 40 100.00 1349 reject_low 11 ALIGNMENT 0 YS2-3l10.q1k vc_1 596 62 2512 2511 C 535 0.00 1349 reject_low 11 ALIGNMENT 0 YS2-3l10.q1k vc_2 716 637 2106 2105 C 80 0.00 1349 reject_low 12 ALIGNMENT 0 YS2-3l10.q1k vc_7 635 62 2728 2727 C 574 0.00 1349 reject_low 6 ALIGNMENT 0 YS2-3l10.q1k vc_3 596 62 2512 2511 C 535 0.00 1349 reject_low 13 ALIGNMENT 148 YS2-3l10.q1k vc_4 636 797 6353 6514 F 162 97.53 1349|1,0 reject_low 9 ALIGNMENT 256 YS2-3l10.q1k vc_3 636 1039 2531 2935 F 404 89.11 1349 reject_low 4 ALIGNMENT 851 YS2-3l12.q1k chr04 30 1141 605511 606630 F 1112 94.15 1407 accept 0 ALIGNMENT 932 YS2-3l12.p1k chr04 1119 34 609234 610331 C 1086 96.04 1179 accept 0 ALIGNMENT 0 YS2-3l13.p1k chr12 340 356 386294 386293 F 17 0.00 356 accept 0 ALIGNMENT 291 YS2-3l13.p1k chr12 35 339 385990 386294 F 305 99.34 356 accept 0 ALIGNMENT 886 YS2-3l14.q1k chr13 27 1083 279566 280609 F 1057 96.03 1371 accept 0 ALIGNMENT 320 YS2-3l15.q1k vc_3 585 1054 2531 2989 F 470 91.28 1409 reject_low 8 ALIGNMENT 0 YS2-3l15.q1k vc_4 586 585 5872 6353 F 0 0.00 1409 reject_low 10 ALIGNMENT 0 YS2-3l15.q1k vc_4 62 584 126 125 F 523 0.00 1409 reject_low 9 ALIGNMENT 0 YS2-3l15.q1k vc_7 586 763 13562 13561 F 178 0.00 1409 reject_low 17 ALIGNMENT 0 YS2-3l15.p1k chr12 542 558 456425 456424 F 17 0.00 558 accept 0 ALIGNMENT 0 YS2-3l15.q1k vc_4 763 674 1447 1446 C 90 0.00 1409 reject_low 11 ALIGNMENT 48 YS2-3l15.q1k vc_7 796 745 6360 6411 C 52 98.08 1409|1,0 reject_low 15 ALIGNMENT 0 YS2-3l15.q1k vc_5 62 584 2398 2397 F 523 0.00 1409 reject_low 5 ALIGNMENT 0 YS2-3l15.q1k vc_7 584 62 2728 2727 C 523 0.00 1409 reject_low 4 ALIGNMENT 512 YS2-3l15.q1k chr12 544 32 465050 465562 C 513 100.00 1409 accept 0 ALIGNMENT 87 YS2-3l15.q1k vc_4 673 585 1446 1534 C 89 100.00 1409 reject_low 11 ALIGNMENT 508 YS2-3l15.p1k chr12 33 541 455917 456425 F 509 100.00 558 accept 0 ALIGNMENT 0 YS2-3l15.q1k vc_2 62 584 2164 2163 F 523 0.00 1409 reject_low 7 ALIGNMENT 0 YS2-3l15.q1k vc_2 544 62 2146 2145 C 483 0.00 1409 reject_low 13 ALIGNMENT 0 YS2-3l15.q1k vc_2 763 586 2106 2105 C 178 0.00 1409 reject_low 13 ALIGNMENT 0 YS2-3l15.q1k vc_3 544 62 2513 2512 C 483 0.00 1409 reject_low 14 ALIGNMENT 0 YS2-3l15.q1k vc_1 763 586 2473 2472 C 178 0.00 1409 reject_low 12 ALIGNMENT 41 YS2-3l15.q1k vc_3 585 545 2472 2512 C 41 100.00 1409 reject_low 14 ALIGNMENT 332 YS2-3l15.q1k vc_7 1101 585 2226 2727 C 517 90.33 1409 reject_low 4 ALIGNMENT 0 YS2-3l15.p1k chr12 542 558 465562 465561 F 17 0.00 558 reject_low 2 ALIGNMENT 320 YS2-3l15.q1k vc_1 585 1054 2531 2989 F 470 91.28 1409 reject_low 6 ALIGNMENT 0 YS2-3l15.q1k chr12 763 545 465051 465050 C 219 0.00 1409 accept 0 ALIGNMENT 39 YS2-3l15.q1k vc_5 585 547 5025 5063 C 39 100.00 1409 reject_low 16 ALIGNMENT 331 YS2-3l15.q1k vc_5 585 1101 2398 2899 F 517 90.33 1409 reject_low 5 ALIGNMENT 320 YS2-3l15.q1k vc_2 585 1054 2164 2622 F 470 91.28 1409 reject_low 7 ALIGNMENT 512 YS2-3l15.q1k chr12 544 32 455913 456425 C 513 100.00 1409 reject_low 1 ALIGNMENT 0 YS2-3l15.q1k vc_5 763 586 5026 5025 C 178 0.00 1409 reject_low 16 ALIGNMENT 36 YS2-3l15.q1k vc_5 582 547 1 36 C 36 100.00 1409 reject_low 18 ALIGNMENT 41 YS2-3l15.q1k vc_4 545 585 5831 5871 F 41 100.00 1409 reject_low 10 ALIGNMENT 0 YS2-3l15.q1k vc_7 744 62 6412 6411 C 683 0.00 1409 reject_low 15 ALIGNMENT 0 YS2-3l15.q1k vc_5 763 583 2 1 C 181 0.00 1409 reject_low 18 ALIGNMENT 0 YS2-3l15.q1k vc_7 795 796 5172 6360 C 0 0.00 1409 reject_low 15 ALIGNMENT 0 YS2-3l15.q1k vc_4 584 62 5813 5812 C 523 0.00 1409 reject_low 3 ALIGNMENT 0 YS2-3l15.q1k vc_4 584 62 1535 1534 C 523 0.00 1409 reject_low 11 ALIGNMENT 159 YS2-3l15.q1k vc_4 585 746 6353 6514 F 162 100.00 1409|1,0 reject_low 10 ALIGNMENT 159 YS2-3l15.q1k vc_4 585 746 126 287 F 162 100.00 1409 reject_low 9 ALIGNMENT 112 YS2-3l15.q1k vc_7 1054 795 4924 5172 C 260 84.23 1409|0,1 reject_low 15 ALIGNMENT 508 YS2-3l15.p1k chr12 33 541 465054 465562 F 509 100.00 558 reject_low 2 ALIGNMENT 0 YS2-3l15.q1k vc_1 544 62 2513 2512 C 483 0.00 1409 reject_low 12 ALIGNMENT 41 YS2-3l15.q1k vc_2 585 545 2105 2145 C 41 100.00 1409 reject_low 13 ALIGNMENT 0 YS2-3l15.q1k vc_5 546 62 5064 5063 C 485 0.00 1409 reject_low 16 ALIGNMENT 0 YS2-3l15.q1k vc_3 62 584 2531 2530 F 523 0.00 1409 reject_low 8 ALIGNMENT 0 YS2-3l15.q1k vc_5 546 62 37 36 C 485 0.00 1409 reject_low 18 ALIGNMENT 327 YS2-3l15.q1k vc_4 1108 585 5303 5812 C 524 89.89 1409 reject_low 3 ALIGNMENT 41 YS2-3l15.q1k vc_1 585 545 2472 2512 C 41 100.00 1409 reject_low 12 ALIGNMENT 0 YS2-3l15.q1k vc_4 747 763 6514 6513 F 17 0.00 1409 reject_low 10 ALIGNMENT 0 YS2-3l15.q1k chr12 763 545 455914 455913 C 219 0.00 1409 reject_low 1 ALIGNMENT 38 YS2-3l15.q1k vc_7 548 585 13525 13562 F 38 100.00 1409 reject_low 17 ALIGNMENT 0 YS2-3l15.q1k vc_1 62 584 2531 2530 F 523 0.00 1409 reject_low 6 ALIGNMENT 0 YS2-3l15.q1k vc_3 763 586 2473 2472 C 178 0.00 1409 reject_low 14 ALIGNMENT 0 YS2-3l15.q1k vc_4 747 763 287 286 F 17 0.00 1409 reject_low 9 ALIGNMENT 0 YS2-3l15.q1k vc_7 62 547 13525 13524 F 486 0.00 1409 reject_low 17 ALIGNMENT 0 YS2-3l15.q1k vc_4 62 544 5831 5830 F 483 0.00 1409 reject_low 10 ALIGNMENT 71 YS2-3l16.q1k chr12 731 513 43584 43802 C 219 78.08 1353 reject_low 1 ALIGNMENT 872 YS2-3l16.q1k chr08 1093 31 29792 30857 C 1063 95.58 1353 accept 0 ALIGNMENT 0 YS2-3l16.q1k chr12 765 732 43585 43584 C 34 0.00 1353 reject_low 1 ALIGNMENT 0 YS2-3l16.q1k chr12 512 62 43803 43802 C 451 0.00 1353 reject_low 1 ALIGNMENT 775 YS2-3l17.q1k chr13 32 919 756114 756999 F 888 96.73 1261 accept 0 ALIGNMENT 331 YS2-3l17.p1k chr13 727 272 758401 758854 C 456 91.67 1076 accept 0 ALIGNMENT 0 YS2-3l19.q1k vc_4 239 62 111 110 C 178 0.00 729 reject_vc 10 ALIGNMENT 219 YS2-3l19.q1k vc_7 302 53 4923 5172 C 250 96.00 729|0,1 reject_vc 8 ALIGNMENT 76 YS2-3l19.q1k vc_4 307 530 1879 2099 F 224 81.25 729 reject_vc 9 ALIGNMENT 274 YS2-3l19.q1k vc_1 1 302 2689 2990 F 302 97.02 729 reject_vc 5 ALIGNMENT 350 YS2-3l19.q1k vc_5 1 530 2556 3083 F 530 90.19 729 reject_vc 2 ALIGNMENT 0 YS2-3l19.q1k vc_4 239 62 6338 6337 C 178 0.00 729 reject_vc 11 ALIGNMENT 41 YS2-3l19.q1k vc_4 302 240 6275 6337 C 63 88.89 729 reject_vc 11 ALIGNMENT 0 YS2-3l19.p1k chr12 374 357 454915 454914 C 18 0.00 374 accept 0 ALIGNMENT 0 YS2-3l19.p1k chr12 374 357 464052 464051 C 18 0.00 374 accept 1 ALIGNMENT 0 YS2-3l19.q1k vc_4 303 306 1613 1878 F 4 0.00 729 reject_vc 9 ALIGNMENT 0 YS2-3l19.q1k vc_4 62 239 1550 1549 F 178 0.00 729 reject_vc 9 ALIGNMENT 326 YS2-3l19.p1k chr12 356 28 454914 455242 C 329 100.00 374 accept 0 ALIGNMENT 0 YS2-3l19.q1k vc_7 304 303 4699 4922 C 2 0.00 729 reject_vc 8 ALIGNMENT 51 YS2-3l19.q1k vc_7 54 3 6360 6411 C 52 100.00 729|1,0 reject_vc 8 ALIGNMENT 326 YS2-3l19.p1k chr12 356 28 464051 464379 C 329 100.00 374 accept 1 ALIGNMENT 274 YS2-3l19.q1k vc_3 1 302 2689 2990 F 302 97.02 729 reject_vc 7 ALIGNMENT 41 YS2-3l19.q1k vc_4 302 240 48 110 C 63 88.89 729 reject_vc 10 ALIGNMENT 63 YS2-3l19.q1k vc_7 413 305 4587 4698 C 109 87.16 729 reject_vc 8 ALIGNMENT 274 YS2-3l19.q1k vc_2 1 302 2322 2623 F 302 97.02 729 reject_vc 6 ALIGNMENT 41 YS2-3l19.q1k vc_4 240 302 1550 1612 F 63 88.89 729 reject_vc 9 ALIGNMENT 0 YS2-3l19.q1k vc_7 53 54 5172 6360 C 0 0.00 729 reject_vc 8 ALIGNMENT 350 YS2-3l19.q1k vc_7 530 1 2042 2569 C 530 89.62 729 reject_vc 3 ALIGNMENT 326 YS2-3l19.q1k vc_4 413 1 5236 5654 C 413 93.46 729 reject_vc 4 ALIGNMENT 845 YS2-3l20.q1k chr04 34 1079 1102025 1103071 F 1046 95.41 1238 accept 0 ALIGNMENT 342 YS2-3l21.p1k chr15 534 34 14084 14556 C 501 92.61 553 ambiguous_tel 1 ALIGNMENT 344 YS2-3l21.q1k chr15 32 533 14084 14556 F 502 92.63 533 ambiguous_tel 0 ALIGNMENT 0 YS2-3l21.p1k chr15 553 535 14085 14084 C 19 0.00 553 ambiguous_tel 1 ALIGNMENT 0 YS2-3l22.q1k vc_7 62 311 13525 13524 F 250 0.00 349 reject_low 12 ALIGNMENT 42 YS2-3l22.q1k vc_4 308 349 5830 5871 F 42 100.00 349 reject_low 10 ALIGNMENT 39 YS2-3l22.q1k vc_5 349 311 5025 5063 C 39 100.00 349 reject_low 11 ALIGNMENT 0 YS2-3l22.q1k vc_1 307 62 2514 2513 C 246 0.00 349 reject_low 8 ALIGNMENT 0 YS2-3l22.q1k vc_4 62 307 5830 5829 F 246 0.00 349 reject_low 10 ALIGNMENT 169 YS2-3l22.p1k vc_2 398 1 1371 1749 C 398 83.17 429 reject_vc 3 ALIGNMENT 42 YS2-3l22.q1k vc_3 349 308 2472 2513 C 42 100.00 349 reject_low 9 ALIGNMENT 36 YS2-3l22.q1k vc_5 346 311 1 36 C 36 100.00 349 reject_low 13 ALIGNMENT 162 YS2-3l22.p1k vc_7 1 280 13918 14190 F 280 86.43 429 reject_vc 7 ALIGNMENT 0 YS2-3l22.q1k vc_5 310 62 37 36 C 249 0.00 349 reject_low 13 ALIGNMENT 162 YS2-3l22.p1k vc_7 1 280 456 728 F 280 86.43 429 reject_vc 6 ALIGNMENT 0 YS2-3l22.q1k vc_3 307 62 2514 2513 C 246 0.00 349 reject_low 9 ALIGNMENT 0 YS2-3l22.q1k chr04 309 349 1125957 1125956 F 41 0.00 349 accept 0 ALIGNMENT 42 YS2-3l22.q1k vc_1 349 308 2472 2513 C 42 100.00 349 reject_low 8 ALIGNMENT 169 YS2-3l22.p1k vc_5 398 1 4291 4669 C 398 83.17 429 reject_vc 5 ALIGNMENT 169 YS2-3l22.p1k vc_1 398 1 1371 1749 C 398 83.17 429 reject_vc 2 ALIGNMENT 0 YS2-3l22.q1k vc_5 310 62 5064 5063 C 249 0.00 349 reject_low 11 ALIGNMENT 170 YS2-3l22.p1k vc_6 1 398 3712 4090 F 398 83.17 429 reject_vc 1 ALIGNMENT 169 YS2-3l22.p1k vc_3 398 1 1371 1749 C 398 83.17 429 reject_vc 4 ALIGNMENT 274 YS2-3l22.q1k chr04 25 308 1125673 1125957 F 284 99.65 349 accept 0 ALIGNMENT 38 YS2-3l22.q1k vc_7 312 349 13525 13562 F 38 100.00 349 reject_low 12 ALIGNMENT 20 YS2-3l23.q1k chrm 746 725 53736 53757 C 22 100.00 1275 reject_low 10 ALIGNMENT 0 YS2-3l23.q1k chrm 868 793 40378 44186 C 76 0.00 1275 reject_low 4 ALIGNMENT 0 YS2-3l23.q1k chrm 62 722 50716 50715 F 661 0.00 1275 reject_low 7 ALIGNMENT 31 YS2-3l23.q1k chrm 794 726 47944 48007 C 69 86.96 1275 reject_low 5 ALIGNMENT 41 YS2-3l23.q1k chr10 32 79 7180 7227 F 48 100.00 1275 reject_low 2 ALIGNMENT 32 YS2-3l23.q1k chrm 795 703 55485 55568 C 93 83.87 1275 reject_low 8 ALIGNMENT 813 YS2-3l23.p1k chrm 24 1102 38558 39638 F 1079 98.24 1102 reject_bad_break 0 ALIGNMENT 0 YS2-3l23.q1k chr10 80 711 7227 7226 F 632 0.00 1275 reject_low 2 ALIGNMENT 0 YS2-3l23.q1k chrm 765 747 53734 53735 C 19 0.00 1275 reject_low 10 ALIGNMENT 59 YS2-3l23.q1k chrm 723 783 50716 50776 F 61 100.00 1275 reject_low 7 ALIGNMENT 50 YS2-3l23.q1k chrm 783 710 34193 34265 C 74 90.54 1275 reject_low 6 ALIGNMENT 621 YS2-3l23.q1k chrm 781 32 40388 41135 C 750 99.07 1275 reject_bad_break 0 ALIGNMENT 0 YS2-3l23.q1k chrm 702 62 55569 55568 C 641 0.00 1275 reject_low 8 ALIGNMENT 0 YS2-3l23.q1k chrm 725 62 48008 48007 C 664 0.00 1275 reject_low 5 ALIGNMENT 0 YS2-3l23.q1k chrm 868 795 40378 47943 C 74 0.00 1275 reject_low 5 ALIGNMENT 0 YS2-3l23.q1k chrm 62 724 68604 68603 F 663 0.00 1275 reject_low 9 ALIGNMENT 41 YS2-3l23.q1k chr09 32 79 7197 7244 F 48 100.00 1275 reject_low 1 ALIGNMENT 0 YS2-3l23.q1k chrm 62 802 68618 68617 F 741 0.00 1275 reject_low 3 ALIGNMENT 34 YS2-3l23.q1k chrm 725 783 68604 68666 F 59 89.83 1275 reject_low 9 ALIGNMENT 21 YS2-3l23.q1k chrm 803 861 68618 68673 F 59 84.75 1275 reject_low 3 ALIGNMENT 0 YS2-3l23.q1k chr09 80 711 7244 7243 F 632 0.00 1275 reject_low 1 ALIGNMENT 26 YS2-3l23.q1k chrm 810 766 53685 53733 C 45 86.67 1275 reject_low 10 ALIGNMENT 25 YS2-3l23.q1k chrm 905 869 40341 40377 C 37 89.19 1275 reject_bad_break 0 reject_low 4,5 ALIGNMENT 0 YS2-3l23.q1k chrm 724 62 53758 53757 C 663 0.00 1275 reject_low 10 ALIGNMENT 0 YS2-3l23.q1k chrm 868 782 40378 40387 C 87 0.00 1275 reject_bad_break 0 ALIGNMENT 0 YS2-3l23.q1k chrm 709 62 34266 34265 C 648 0.00 1275 reject_low 6 ALIGNMENT 0 YS2-3l23.q1k chrm 724 62 44250 44249 C 663 0.00 1275 reject_low 4 ALIGNMENT 33 YS2-3l23.q1k chrm 792 725 44187 44249 C 68 86.76 1275 reject_low 4 ALIGNMENT 889 YS2-3m02.q1k chr02 1117 22 515130 516209 C 1096 95.44 1336 accept 0 ALIGNMENT 1017 YS2-3m02.p1k chr02 26 1166 510397 511536 F 1141 96.58 1168 accept 0 ALIGNMENT 252 YS2-3m03.p1k chr03 220 631 282841 283247 F 412 88.59 1125 accept 0 ALIGNMENT 892 YS2-3m03.q1k chr03 1099 22 287001 288077 C 1078 95.64 1233 accept 0 ALIGNMENT 0 YS2-3m06.q1k vc_1 304 395 2991 2990 F 92 0.00 1001 reject_low 4 ALIGNMENT 0 YS2-3m06.q1k vc_4 62 237 1548 1547 F 176 0.00 1001 reject_low 3 ALIGNMENT 0 YS2-3m06.q1k vc_7 53 54 5172 6360 C 0 0.00 1001 reject_low 7 ALIGNMENT 302 YS2-3m06.q1k vc_2 1 303 2322 2624 F 303 100.00 1001 reject_low 5 ALIGNMENT 65 YS2-3m06.q1k vc_4 304 238 6273 6339 C 67 100.00 1001 reject_low 9 ALIGNMENT 115 YS2-3m06.q1k vc_7 421 305 4583 4699 C 117 100.00 1001 reject_low 7 ALIGNMENT 574 YS2-3m06.q1k vc_7 715 1 1858 2569 C 715 94.27 1001 reject_low 1 ALIGNMENT 0 YS2-3m06.q1k vc_4 237 62 113 112 C 176 0.00 1001 reject_low 8 ALIGNMENT 51 YS2-3m06.q1k vc_7 54 3 6360 6411 C 52 100.00 1001|1,0 reject_low 7 ALIGNMENT 0 YS2-3m06.q1k vc_4 395 305 6274 6273 C 91 0.00 1001 reject_low 9 ALIGNMENT 65 YS2-3m06.q1k vc_4 304 238 46 112 C 67 100.00 1001 reject_low 8 ALIGNMENT 247 YS2-3m06.q1k vc_7 303 53 4922 5172 C 251 99.60 1001|0,1 reject_low 7 ALIGNMENT 0 YS2-3m06.q1k vc_4 305 307 1615 1878 F 3 0.00 1001 reject_low 3 ALIGNMENT 0 YS2-3m06.q1k vc_3 304 395 2991 2990 F 92 0.00 1001 reject_low 6 ALIGNMENT 413 YS2-3m06.q1k vc_4 421 1 5232 5654 C 421 99.52 1001 reject_low 2 ALIGNMENT 0 YS2-3m06.q1k vc_7 304 304 4700 4921 C 1 0.00 1001 reject_low 7 ALIGNMENT 574 YS2-3m06.q1k vc_5 1 792 2556 3345 F 792 92.05 1001 reject_vc 0 ALIGNMENT 0 YS2-3m06.q1k vc_4 395 305 47 46 C 91 0.00 1001 reject_low 8 ALIGNMENT 302 YS2-3m06.q1k vc_3 1 303 2689 2991 F 303 100.00 1001 reject_low 6 ALIGNMENT 65 YS2-3m06.q1k vc_4 238 304 1548 1614 F 67 100.00 1001 reject_low 3 ALIGNMENT 0 YS2-3m06.q1k vc_2 304 395 2624 2623 F 92 0.00 1001 reject_low 5 ALIGNMENT 302 YS2-3m06.q1k vc_1 1 303 2689 2991 F 303 100.00 1001 reject_low 4 ALIGNMENT 0 YS2-3m06.q1k vc_4 237 62 6340 6339 C 176 0.00 1001 reject_low 9 ALIGNMENT 263 YS2-3m06.q1k vc_4 308 792 1879 2361 F 485 86.80 1001 reject_low 3 ALIGNMENT 41 YS2-3m08.q1k vc_1 653 613 2472 2512 C 41 100.00 1311 reject_low 18 ALIGNMENT 0 YS2-3m08.q1k vc_3 612 62 2513 2512 C 551 0.00 1311 reject_low 20 ALIGNMENT 246 YS2-3m08.q1k vc_3 653 1003 2531 2885 F 351 91.74 1311 reject_low 11 ALIGNMENT 545 YS2-3m08.p1k chr16 610 29 485933 486514 C 582 99.66 1107 accept_chi 0 ALIGNMENT 0 YS2-3m08.q1k vc_3 62 652 2531 2530 F 591 0.00 1311 reject_low 11 ALIGNMENT 0 YS2-3m08.q1k vc_1 612 62 2513 2512 C 551 0.00 1311 reject_low 18 ALIGNMENT 178 YS2-3m08.p1k vc_3 904 629 1833 2105 C 276 90.22 1107 reject_low 6 ALIGNMENT 41 YS2-3m08.q1k vc_2 653 613 2105 2145 C 41 100.00 1311 reject_low 19 ALIGNMENT 0 YS2-3m08.q1k vc_5 62 652 2398 2397 F 591 0.00 1311 reject_low 2 ALIGNMENT 178 YS2-3m08.p1k vc_7 629 904 13562 13834 F 276 89.86 1107 reject_low 8 ALIGNMENT 0 YS2-3m08.p1k vc_3 628 62 2473 2472 C 567 0.00 1107 reject_low 17 ALIGNMENT 0 YS2-3m08.q1k vc_3 695 654 2473 2472 C 42 0.00 1311 reject_low 20 ALIGNMENT 0 YS2-3m08.q1k vc_5 695 654 5026 5025 C 42 0.00 1311 reject_low 21 ALIGNMENT 0 YS2-3m08.q1k vc_5 614 62 37 36 C 553 0.00 1311 reject_low 23 ALIGNMENT 26 YS2-3m08.p1k vc_1 659 629 2441 2472 C 31 96.77 1107 reject_low 16 ALIGNMENT 246 YS2-3m08.q1k vc_2 653 1003 2164 2518 F 351 91.74 1311 reject_low 10 ALIGNMENT 36 YS2-3m08.q1k vc_5 650 615 1 36 C 36 100.00 1311 reject_low 23 ALIGNMENT 151 YS2-3m08.q1k vc_4 653 816 126 287 F 164 98.78 1311 reject_low 13 ALIGNMENT 0 YS2-3m08.p1k vc_5 628 62 5026 5025 C 567 0.00 1107 reject_low 2 ALIGNMENT 0 YS2-3m08.q1k vc_2 695 654 2106 2105 C 42 0.00 1311 reject_low 19 ALIGNMENT 0 YS2-3m08.q1k vc_4 654 653 5872 6353 F 0 0.00 1311 reject_low 14 ALIGNMENT 0 YS2-3m08.q1k vc_1 695 654 2473 2472 C 42 0.00 1311 reject_low 18 ALIGNMENT 0 YS2-3m08.q1k vc_2 62 652 2164 2163 F 591 0.00 1311 reject_low 10 ALIGNMENT 0 YS2-3m08.p1k chr16 639 611 485934 485933 C 29 0.00 1107 accept_chi 0 ALIGNMENT 239 YS2-3m08.q1k vc_4 1003 653 5456 5812 C 351 91.17 1311 reject_low 12 ALIGNMENT 26 YS2-3m08.p1k vc_3 659 629 2441 2472 C 31 96.77 1107 reject_low 17 ALIGNMENT 0 YS2-3m08.p1k vc_1 628 62 2106 2105 C 567 0.00 1107 reject_low 4 ALIGNMENT 545 YS2-3m08.q1k chr16 31 616 485933 486518 F 586 99.32 1311 accept_chi 1 ALIGNMENT 151 YS2-3m08.q1k vc_4 653 816 6353 6514 F 164 98.78 1311|1,0 reject_low 14 ALIGNMENT 0 YS2-3m08.p1k vc_4 62 628 5871 5870 F 567 0.00 1107 reject_low 7 ALIGNMENT 0 YS2-3m08.q1k vc_2 612 62 2146 2145 C 551 0.00 1311 reject_low 19 ALIGNMENT 178 YS2-3m08.p1k vc_4 629 904 5871 6143 F 276 89.86 1107 reject_low 7 ALIGNMENT 39 YS2-3m08.q1k vc_5 653 615 5025 5063 C 39 100.00 1311 reject_low 21 ALIGNMENT 0 YS2-3m08.q1k vc_4 652 62 1535 1534 C 591 0.00 1311 reject_low 15 ALIGNMENT 178 YS2-3m08.p1k vc_7 629 904 100 372 F 276 89.86 1107 reject_low 3 ALIGNMENT 0 YS2-3m08.p1k vc_1 628 62 2473 2472 C 567 0.00 1107 reject_low 16 ALIGNMENT 246 YS2-3m08.q1k vc_1 653 1003 2531 2885 F 351 91.74 1311 reject_low 9 ALIGNMENT 0 YS2-3m08.p1k vc_3 628 62 2106 2105 C 567 0.00 1107 reject_low 6 ALIGNMENT 0 YS2-3m08.q1k vc_7 652 62 2728 2727 C 591 0.00 1311 reject_low 3 ALIGNMENT 178 YS2-3m08.p1k vc_2 904 629 1833 2105 C 276 90.22 1107 reject_low 5 ALIGNMENT 246 YS2-3m08.q1k vc_7 1003 653 2373 2727 C 351 91.74 1311 reject_low 3 ALIGNMENT 178 YS2-3m08.p1k vc_5 904 629 4753 5025 C 276 90.22 1107 reject_low 2 ALIGNMENT 0 YS2-3m08.q1k vc_7 62 615 13525 13524 F 554 0.00 1311 reject_low 22 ALIGNMENT 41 YS2-3m08.q1k vc_3 653 613 2472 2512 C 41 100.00 1311 reject_low 20 ALIGNMENT 0 YS2-3m08.p1k vc_7 62 628 100 99 F 567 0.00 1107 reject_low 3 ALIGNMENT 0 YS2-3m08.p1k vc_2 628 62 2106 2105 C 567 0.00 1107 reject_low 5 ALIGNMENT 0 YS2-3m08.q1k vc_5 695 651 2 1 C 45 0.00 1311 reject_low 23 ALIGNMENT 0 YS2-3m08.q1k vc_4 62 652 126 125 F 591 0.00 1311 reject_low 13 ALIGNMENT 0 YS2-3m08.q1k vc_5 614 62 5064 5063 C 553 0.00 1311 reject_low 21 ALIGNMENT 0 YS2-3m08.q1k vc_4 652 62 5813 5812 C 591 0.00 1311 reject_low 12 ALIGNMENT 87 YS2-3m08.q1k vc_4 741 653 1446 1534 C 89 100.00 1311 reject_low 15 ALIGNMENT 41 YS2-3m08.q1k vc_4 613 653 5831 5871 F 41 100.00 1311 reject_low 14 ALIGNMENT 246 YS2-3m08.q1k vc_5 653 1003 2398 2752 F 351 91.74 1311 reject_low 2 ALIGNMENT 0 YS2-3m08.q1k vc_1 62 652 2531 2530 F 591 0.00 1311 reject_low 9 ALIGNMENT 178 YS2-3m08.p1k vc_1 904 629 1833 2105 C 276 90.22 1107 reject_low 4 ALIGNMENT 0 YS2-3m08.q1k vc_4 62 612 5831 5830 F 551 0.00 1311 reject_low 14 ALIGNMENT 0 YS2-3m08.p1k vc_7 62 628 13562 13561 F 567 0.00 1107 reject_low 8 ALIGNMENT 0 YS2-3m08.q1k chr16 617 695 486518 486517 F 79 0.00 1311 accept_chi 1 ALIGNMENT 0 YS2-3m08.q1k vc_7 654 695 13562 13561 F 42 0.00 1311 reject_low 22 ALIGNMENT 38 YS2-3m08.q1k vc_7 616 653 13525 13562 F 38 100.00 1311 reject_low 22 ALIGNMENT 588 YS2-3m09.q1k chr08 27 662 250567 251203 F 636 98.27 662 accept_chi 1 ALIGNMENT 603 YS2-3m09.p1k chr08 665 27 250567 251206 C 639 98.90 666 accept_chi 0 ALIGNMENT 762 YS2-3m10.p1k chr16 1075 152 17805 18732 C 924 94.26 1076 accept_tel 0 ALIGNMENT 0 YS2-3m10.p1k chr15 62 151 1072136 1072135 F 90 0.00 1076 reject_low 1 ALIGNMENT 0 YS2-3m10.p1k chr16 151 147 18733 19857 C 5 0.00 1076 accept_tel 0 ALIGNMENT 0 YS2-3m10.q1k chr13 734 226 917888 917887 C 509 0.00 1282 reject_low 2 ALIGNMENT 748 YS2-3m10.p1k chr15 152 1006 1072136 1072993 F 855 95.79 1076 reject_low 1 ALIGNMENT 93 YS2-3m10.p1k chr16 146 29 19858 19976 C 118 95.76 1076 accept_tel 0 ALIGNMENT 811 YS2-3m10.q1k chr15 1051 32 1077219 1078252 C 1020 95.39 1282 reject_low 1 ALIGNMENT 124 YS2-3m10.q1k chr13 225 58 917887 918055 C 168 95.83 1282 reject_low 2 ALIGNMENT 741 YS2-3m10.q1k chr16 32 1006 12888 13867 F 975 94.26 1282 accept_tel 0 ALIGNMENT 1017 YS2-3m12.p1k chr11 29 1150 531479 532596 F 1122 97.68 1158 accept 0 ALIGNMENT 887 YS2-3m12.q1k chr11 1106 26 536002 537080 C 1081 95.56 1358 accept 0 ALIGNMENT 414 YS2-3m13.p1k scplasm1 1 666 940 1612 F 666 88.14 666 accept_chi 1 ALIGNMENT 583 YS2-3m13.q1k scplasm1 1 756 4313 5053 F 756 94.31 1099 accept_chi 0 ALIGNMENT 974 YS2-3m14.p1k chr10 27 1159 618647 619789 F 1133 96.47 1167 accept 0 ALIGNMENT 878 YS2-3m14.q1k chr10 984 34 622555 623500 C 951 97.79 1347 accept 0 ALIGNMENT 51 YS2-3m15.q1k vc_7 54 3 6360 6411 C 52 100.00 865|1,0 reject_vc 9 ALIGNMENT 62 YS2-3m15.q1k vc_4 304 238 46 112 C 67 98.51 865 reject_low 10 ALIGNMENT 0 YS2-3m15.q1k vc_4 237 62 113 112 C 176 0.00 865 reject_low 10 ALIGNMENT 62 YS2-3m15.q1k vc_4 238 304 1548 1614 F 67 98.51 865 reject_vc 8 ALIGNMENT 298 YS2-3m15.q1k vc_3 1 303 2689 2991 F 303 99.67 865 reject_vc 7 ALIGNMENT 0 YS2-3m15.p1k chr16 221 204 96647 96646 C 18 0.00 221 manual 4 ALIGNMENT 298 YS2-3m15.q1k vc_1 1 303 2689 2991 F 303 99.67 865 reject_vc 5 ALIGNMENT 439 YS2-3m15.q1k vc_5 1 641 2556 3205 F 641 91.11 865 reject_vc 0 ALIGNMENT 123 YS2-3m15.p1k chr16 203 26 96646 96824 C 178 90.45 221 manual 4 ALIGNMENT 0 YS2-3m15.q1k vc_4 305 307 1615 1878 F 3 0.00 865 reject_vc 8 ALIGNMENT 0 YS2-3m15.q1k vc_4 237 62 6340 6339 C 176 0.00 865 reject_low 11 ALIGNMENT 244 YS2-3m15.q1k vc_7 303 53 4922 5172 C 251 99.20 865|0,1 reject_vc 9 ALIGNMENT 365 YS2-3m15.q1k vc_4 403 1 5250 5654 C 403 97.02 865 reject_vc 3 ALIGNMENT 135 YS2-3m15.q1k vc_4 308 641 1879 2221 F 334 83.23 865 reject_vc 8 ALIGNMENT 0 YS2-3m15.q1k vc_7 53 54 5172 6360 C 0 0.00 865 reject_vc 9 ALIGNMENT 0 YS2-3m15.q1k vc_7 304 304 4700 4921 C 1 0.00 865 reject_vc 9 ALIGNMENT 433 YS2-3m15.q1k vc_7 578 1 1988 2569 C 578 92.39 865 reject_vc 1 ALIGNMENT 72 YS2-3m15.q1k vc_7 403 305 4601 4699 C 99 90.91 865 reject_vc 9 ALIGNMENT 0 YS2-3m15.q1k vc_4 62 237 1548 1547 F 176 0.00 865 reject_vc 8 ALIGNMENT 0 YS2-3m15.p1k chr13 204 221 634321 634320 F 18 0.00 221 manual 2 ALIGNMENT 171 YS2-3m15.p1k chr13 26 203 634143 634321 F 178 99.44 221 manual 2 ALIGNMENT 298 YS2-3m15.q1k vc_2 1 303 2322 2624 F 303 99.67 865 reject_vc 6 ALIGNMENT 62 YS2-3m15.q1k vc_4 304 238 6273 6339 C 67 98.51 865 reject_low 11 ALIGNMENT 173 YS2-3m17.p1k chr12 48 224 468753 468930 F 177 99.44 1066 reject_low 2 ALIGNMENT 0 YS2-3m17.p1k chr12 240 629 489481 489480 F 390 0.00 1066 reject_low 3 ALIGNMENT 775 YS2-3m17.q1k chr12 1024 31 455346 456323 C 994 94.16 1263 reject_low 1 ALIGNMENT 128 YS2-3m17.p1k chr12 106 239 489348 489481 F 134 98.51 1066 reject_low 3 ALIGNMENT 0 YS2-3m17.p1k chr12 225 629 485814 485813 F 405 0.00 1066 reject_low 6 ALIGNMENT 781 YS2-3m17.q1k chr12 1037 31 464470 465460 C 1007 94.04 1263 accept 0 ALIGNMENT 119 YS2-3m17.p1k chr12 106 224 472464 472582 F 119 100.00 1066 reject_low 4 ALIGNMENT 0 YS2-3m17.p1k chr12 77 105 489348 489347 F 29 0.00 1066 reject_low 3 ALIGNMENT 585 YS2-3m17.p1k chr12 48 933 459616 460529 F 886 90.74 1066 accept 0 ALIGNMENT 0 YS2-3m17.p1k chr12 225 629 482162 482161 F 405 0.00 1066 reject_low 5 ALIGNMENT 0 YS2-3m17.p1k chr12 225 629 468930 468929 F 405 0.00 1066 reject_low 2 ALIGNMENT 0 YS2-3m17.p1k chr12 225 629 472582 472581 F 405 0.00 1066 reject_low 4 ALIGNMENT 0 YS2-3m17.p1k chr12 77 105 485696 485695 F 29 0.00 1066 reject_low 6 ALIGNMENT 0 YS2-3m17.p1k chr12 77 105 472464 472463 F 29 0.00 1066 reject_low 4 ALIGNMENT 0 YS2-3m17.p1k chr12 77 105 482044 482043 F 29 0.00 1066 reject_low 5 ALIGNMENT 119 YS2-3m17.p1k chr12 106 224 482044 482162 F 119 100.00 1066 reject_low 5 ALIGNMENT 119 YS2-3m17.p1k chr12 106 224 485696 485814 F 119 100.00 1066 reject_low 6 ALIGNMENT 0 YS2-3m18.p1k chr04 355 372 1523556 1523555 F 18 0.00 372 ambiguous_tel 18 ALIGNMENT 275 YS2-3m18.p1k chr05 30 354 63728 64052 F 325 95.08 372 manual 23 ALIGNMENT 0 YS2-3m18.p1k chr14 350 372 782237 782236 F 23 0.00 372 ambiguous_tel 22 ALIGNMENT 0 YS2-3m18.q1k chr15 409 370 1082827 1082826 C 40 0.00 409 ambiguous_tel 33 ALIGNMENT 273 YS2-3m18.p1k chr12 25 349 1062910 1063235 F 325 95.08 372 ambiguous_tel 24 ALIGNMENT 279 YS2-3m18.p1k chr14 25 349 781912 782237 F 325 95.69 372 ambiguous_tel 22 ALIGNMENT 0 YS2-3m18.p1k chr01 372 355 1846 1845 C 18 0.00 372 ambiguous_tel 26 ALIGNMENT 263 YS2-3m18.p1k chr15 349 30 11591 11910 C 320 94.38 372 ambiguous_tel 28 ALIGNMENT 0 YS2-3m18.q1k chr01 370 409 177029 177028 F 40 0.00 409 manual 29 ALIGNMENT 0 YS2-3m18.q1k chr10 370 409 9146 9145 F 40 0.00 409 ambiguous_tel 9 ALIGNMENT 283 YS2-3m18.q1k chr09 42 369 8836 9163 F 328 95.73 409 ambiguous_tel 8 ALIGNMENT 0 YS2-3m18.p1k chr16 372 355 7975 7974 C 18 0.00 372 ambiguous_tel 40 ALIGNMENT 171 YS2-3m18.p1k chr09 30 354 433925 434258 F 325 84.62 372 ambiguous_tel 41 ALIGNMENT 0 YS2-3m18.p1k chr02 355 372 809375 809374 F 18 0.00 372 ambiguous_tel 6 ALIGNMENT 0 YS2-3m18.p1k chr09 355 372 434258 434257 F 18 0.00 372 ambiguous_tel 41 ALIGNMENT 0 YS2-3m18.q1k chr13 409 370 922632 922631 C 40 0.00 409 ambiguous_tel 31 ALIGNMENT 0 YS2-3m18.q1k chr03 409 363 290026 290025 C 47 0.00 409 ambiguous_tel 42 ALIGNMENT 0 YS2-3m18.p1k chr07 355 372 1080636 1080635 F 18 0.00 372 ambiguous_tel 11 ALIGNMENT 174 YS2-3m18.p1k chr13 25 354 922633 922972 F 330 84.85 372 ambiguous_tel 37 ALIGNMENT 186 YS2-3m18.p1k chr01 354 25 176691 177027 C 330 86.06 372 manual 35 ALIGNMENT 0 YS2-3m18.p1k chr13 355 372 922972 922971 F 18 0.00 372 ambiguous_tel 37 ALIGNMENT 0 YS2-3m18.p1k chr15 355 372 1083167 1083166 F 18 0.00 372 ambiguous_tel 39 ALIGNMENT 0 YS2-3m18.q1k chr07 370 409 6660 6659 F 40 0.00 409 ambiguous_tel 15 ALIGNMENT 274 YS2-3m18.q1k chr01 42 369 1850 2177 F 328 94.82 409 ambiguous_tel 14 ALIGNMENT 179 YS2-3m18.q1k chr13 369 57 922631 922952 C 313 86.26 409 ambiguous_tel 31 ALIGNMENT 0 YS2-3m18.p1k chr07 372 355 6329 6328 C 18 0.00 372 ambiguous_tel 27 ALIGNMENT 0 YS2-3m18.q1k chr11 370 409 2190 2189 F 40 0.00 409 ambiguous_tel 32 ALIGNMENT 0 YS2-3m18.p1k chr11 372 355 1850 1849 C 18 0.00 372 ambiguous_tel 38 ALIGNMENT 319 YS2-3m18.q1k chr07 369 42 1080304 1080631 C 328 99.39 409 ambiguous_tel 2 ALIGNMENT 286 YS2-3m18.q1k chr08 42 369 11964 12291 F 328 96.04 409 ambiguous_tel 3 ALIGNMENT 283 YS2-3m18.q1k chr04 369 42 1523224 1523551 C 328 95.73 409 ambiguous_tel 7 ALIGNMENT 0 YS2-3m18.p1k chr05 355 372 64052 64051 F 18 0.00 372 manual 23 ALIGNMENT 0 YS2-3m18.q1k chr15 370 409 11918 11917 F 40 0.00 409 ambiguous_tel 16 ALIGNMENT 324 YS2-3m18.q1k chr02 369 40 809043 809372 C 330 99.70 409 ambiguous_tel 1 ALIGNMENT 279 YS2-3m18.p1k chr12 349 25 13126 13451 C 325 95.69 372 ambiguous_tel 21 ALIGNMENT 45 YS2-3m18.p1k chr03 30 182 290026 290175 F 153 78.43 372 ambiguous_tel 43 ALIGNMENT 279 YS2-3m18.p1k chr10 354 25 8814 9144 C 330 95.15 372 ambiguous_tel 20 ALIGNMENT 282 YS2-3m18.p1k chr08 354 25 11959 12289 C 330 95.45 372 ambiguous_tel 17 ALIGNMENT 0 YS2-3m18.q1k chr07 409 370 1080305 1080304 C 40 0.00 409 ambiguous_tel 2 ALIGNMENT 0 YS2-3m18.q1k chr14 409 370 781911 781910 C 40 0.00 409 ambiguous_tel 5 ALIGNMENT 272 YS2-3m18.p1k chr02 354 25 7643 7974 C 330 94.55 372 ambiguous_tel 25 ALIGNMENT 177 YS2-3m18.p1k chr03 25 354 307791 308130 F 330 85.15 372 ambiguous_tel 36 ALIGNMENT 0 YS2-3m18.p1k chr12 372 350 13127 13126 C 23 0.00 372 ambiguous_tel 21 ALIGNMENT 181 YS2-3m18.q1k chr03 369 42 307789 308125 C 328 85.67 409 ambiguous_tel 30 ALIGNMENT 0 YS2-3m18.q1k chr12 409 370 1062909 1062908 C 40 0.00 409 ambiguous_tel 10 ALIGNMENT 0 YS2-3m18.p1k chr02 372 355 7644 7643 C 18 0.00 372 ambiguous_tel 25 ALIGNMENT 271 YS2-3m18.q1k chr07 42 369 6333 6660 F 328 94.51 409 ambiguous_tel 15 ALIGNMENT 0 YS2-3m18.p1k chr15 372 350 11592 11591 C 23 0.00 372 ambiguous_tel 28 ALIGNMENT 0 YS2-3m18.q1k vc_1 368 62 2513 2512 C 307 0.00 409 reject_vc 0 ALIGNMENT 0 YS2-3m18.p1k chr01 372 355 176692 176691 C 18 0.00 372 manual 35 ALIGNMENT 41 YS2-3m18.q1k vc_1 409 369 2472 2512 C 41 100.00 409 reject_vc 0 ALIGNMENT 189 YS2-3m18.q1k chr01 40 369 176694 177029 F 330 86.36 409 manual 29 ALIGNMENT 270 YS2-3m18.p1k chr01 354 25 1845 2175 C 330 94.24 372 ambiguous_tel 26 ALIGNMENT 315 YS2-3m18.p1k chr07 25 354 1080306 1080636 F 330 98.79 372 ambiguous_tel 11 ALIGNMENT 0 YS2-3m18.q1k chr02 370 409 7976 7975 F 40 0.00 409 ambiguous_tel 13 ALIGNMENT 268 YS2-3m18.q1k chr15 42 369 11591 11918 F 328 94.21 409 ambiguous_tel 16 ALIGNMENT 0 YS2-3m18.p1k chr03 355 372 308130 308129 F 18 0.00 372 ambiguous_tel 36 ALIGNMENT 277 YS2-3m18.q1k chr05 369 45 63720 64044 C 325 95.38 409 manual 12 ALIGNMENT 276 YS2-3m18.q1k chr02 42 369 7648 7976 F 328 95.12 409 ambiguous_tel 13 ALIGNMENT 171 YS2-3m18.p1k chr16 354 25 7974 8313 C 330 84.55 372 ambiguous_tel 40 ALIGNMENT 286 YS2-3m18.q1k chr12 42 369 13126 13453 F 328 96.04 409 ambiguous_tel 4 ALIGNMENT 0 YS2-3m18.p1k chr12 350 372 1063235 1063234 F 23 0.00 372 ambiguous_tel 24 ALIGNMENT 176 YS2-3m18.q1k chr11 42 369 1854 2190 F 328 85.06 409 ambiguous_tel 32 ALIGNMENT 46 YS2-3m18.q1k chr03 362 209 290025 290175 C 154 78.57 409 ambiguous_tel 42 ALIGNMENT 176 YS2-3m18.q1k chr15 369 57 1082826 1083147 C 313 85.94 409 ambiguous_tel 33 ALIGNMENT 0 YS2-3m18.q1k chr04 409 370 1523225 1523224 C 40 0.00 409 ambiguous_tel 7 ALIGNMENT 176 YS2-3m18.q1k chr16 57 369 7994 8315 F 313 85.94 409 ambiguous_tel 34 ALIGNMENT 283 YS2-3m18.q1k chr10 42 369 8819 9146 F 328 95.73 409 ambiguous_tel 9 ALIGNMENT 174 YS2-3m18.p1k chr11 354 30 1849 2182 C 325 84.92 372 ambiguous_tel 38 ALIGNMENT 171 YS2-3m18.p1k chr15 25 354 1082828 1083167 F 330 84.55 372 ambiguous_tel 39 ALIGNMENT 0 YS2-3m18.p1k chr10 372 355 8815 8814 C 18 0.00 372 ambiguous_tel 20 ALIGNMENT 0 YS2-3m18.p1k chr09 372 355 8832 8831 C 18 0.00 372 ambiguous_tel 19 ALIGNMENT 0 YS2-3m18.p1k chr03 183 372 290175 290174 F 190 0.00 372 ambiguous_tel 43 ALIGNMENT 0 YS2-3m18.q1k chr09 370 409 9163 9162 F 40 0.00 409 ambiguous_tel 8 ALIGNMENT 0 YS2-3m18.q1k chr03 409 370 307790 307789 C 40 0.00 409 ambiguous_tel 30 ALIGNMENT 0 YS2-3m18.q1k chr02 409 370 809044 809043 C 40 0.00 409 ambiguous_tel 1 ALIGNMENT 0 YS2-3m18.p1k chr08 372 355 11960 11959 C 18 0.00 372 ambiguous_tel 17 ALIGNMENT 286 YS2-3m18.q1k chr14 369 42 781910 782237 C 328 96.04 409 ambiguous_tel 5 ALIGNMENT 0 YS2-3m18.q1k chr08 370 409 12291 12290 F 40 0.00 409 ambiguous_tel 3 ALIGNMENT 0 YS2-3m18.q1k chr03 208 62 290176 290175 C 147 0.00 409 ambiguous_tel 42 ALIGNMENT 279 YS2-3m18.p1k chr04 25 354 1523226 1523556 F 330 95.15 372 ambiguous_tel 18 ALIGNMENT 267 YS2-3m18.p1k chr07 354 25 6328 6658 C 330 93.94 372 ambiguous_tel 27 ALIGNMENT 321 YS2-3m18.p1k chr02 25 354 809045 809375 F 330 99.39 372 ambiguous_tel 6 ALIGNMENT 0 YS2-3m18.q1k chr12 370 409 13453 13452 F 40 0.00 409 ambiguous_tel 4 ALIGNMENT 279 YS2-3m18.p1k chr09 354 25 8831 9161 C 330 95.15 372 ambiguous_tel 19 ALIGNMENT 0 YS2-3m18.q1k chr01 370 409 2177 2176 F 40 0.00 409 ambiguous_tel 14 ALIGNMENT 0 YS2-3m18.q1k chr05 409 370 63721 63720 C 40 0.00 409 manual 12 ALIGNMENT 0 YS2-3m18.q1k chr16 370 409 8315 8314 F 40 0.00 409 ambiguous_tel 34 ALIGNMENT 280 YS2-3m18.q1k chr12 369 42 1062908 1063235 C 328 95.43 409 ambiguous_tel 10 ALIGNMENT 922 YS2-3m19.p1k chr11 1095 28 147652 148722 C 1068 96.44 1102 accept 0 ALIGNMENT 765 YS2-3m19.q1k chr11 31 950 147071 147981 F 920 95.87 1335 accept 0 ALIGNMENT 51 YS2-3m20.q1k vc_7 54 3 6360 6411 C 52 100.00 792|1,0 reject_low 8 ALIGNMENT 302 YS2-3m20.q1k vc_1 1 303 2689 2991 F 303 100.00 792 reject_vc 4 ALIGNMENT 429 YS2-3m20.q1k vc_7 545 1 2022 2569 C 545 93.76 792 reject_vc 2 ALIGNMENT 302 YS2-3m20.q1k vc_3 1 303 2689 2991 F 303 100.00 792 reject_vc 6 ALIGNMENT 0 YS2-3m20.p1k chr11 334 317 127999 127998 C 18 0.00 334 accept 0 ALIGNMENT 0 YS2-3m20.q1k vc_7 53 54 5172 6360 C 0 0.00 792 reject_low 8 ALIGNMENT 0 YS2-3m20.q1k vc_4 237 62 6340 6339 C 176 0.00 792 reject_low 10 ALIGNMENT 302 YS2-3m20.q1k vc_2 1 303 2322 2624 F 303 100.00 792 reject_vc 5 ALIGNMENT 133 YS2-3m20.q1k vc_4 308 638 1879 2207 F 331 83.08 792 reject_low 7 ALIGNMENT 65 YS2-3m20.q1k vc_4 238 304 1548 1614 F 67 100.00 792 reject_low 7 ALIGNMENT 444 YS2-3m20.q1k vc_5 1 699 2556 3251 F 699 89.56 792 reject_vc 1 ALIGNMENT 65 YS2-3m20.q1k vc_4 304 238 46 112 C 67 100.00 792 reject_low 9 ALIGNMENT 247 YS2-3m20.q1k vc_7 303 53 4922 5172 C 251 99.60 792|0,1 reject_low 8 ALIGNMENT 0 YS2-3m20.q1k vc_4 237 62 113 112 C 176 0.00 792 reject_low 9 ALIGNMENT 0 YS2-3m20.q1k vc_4 62 237 1548 1547 F 176 0.00 792 reject_low 7 ALIGNMENT 0 YS2-3m20.q1k vc_4 305 307 1615 1878 F 3 0.00 792 reject_low 7 ALIGNMENT 65 YS2-3m20.q1k vc_4 304 238 6273 6339 C 67 100.00 792 reject_low 10 ALIGNMENT 0 YS2-3m20.q1k vc_7 304 304 4700 4921 C 1 0.00 792 reject_low 8 ALIGNMENT 382 YS2-3m20.q1k vc_4 412 1 5237 5654 C 412 98.06 792 reject_vc 3 ALIGNMENT 85 YS2-3m20.q1k vc_7 412 305 4588 4699 C 108 94.44 792 reject_low 8 ALIGNMENT 267 YS2-3m20.p1k chr11 316 33 127998 128281 C 284 98.94 334 accept 0 ALIGNMENT 326 YS2-3m21.p1k chrm 34 625 26928 27538 F 592 96.11 643 accept_chi 1 ALIGNMENT 184 YS2-3m21.p1k chrm 51 341 26946 27236 F 291 99.31 643 reject_low 2 ALIGNMENT 0 YS2-3m21.p1k chrm 342 643 27236 27235 F 302 0.00 643 reject_low 2 ALIGNMENT 0 YS2-3m21.p1k chrm 626 643 27538 27537 F 18 0.00 643 accept_chi 1 ALIGNMENT 320 YS2-3m21.q1k chrm 614 23 26928 27538 C 592 95.44 615 accept_chi 0 ALIGNMENT 0 YS2-3m23.p1k chr16 62 148 447216 447215 F 87 0.00 1061 reject_low 3 ALIGNMENT 0 YS2-3m23.p1k chr14 833 710 767632 767631 C 124 0.00 1061 reject_low 2 ALIGNMENT 47 YS2-3m23.p1k chr15 407 172 622821 623056 C 236 73.73 1061 reject_low 4 ALIGNMENT 0 YS2-3m23.p1k chr14 139 62 768201 768200 C 78 0.00 1061 reject_low 2 ALIGNMENT 40 YS2-3m23.p1k chr16 586 688 447653 447758 F 103 80.58 1061 reject_low 3 ALIGNMENT 0 YS2-3m23.p1k chr16 689 833 447758 447757 F 145 0.00 1061 reject_low 3 ALIGNMENT 788 YS2-3m23.q1k chr04 25 974 463504 464441 F 950 95.68 1206 accept 0 ALIGNMENT 131 YS2-3m23.q1k chr02 73 759 279162 279853 F 687 73.80 1206 reject_low 1 ALIGNMENT 0 YS2-3m23.p1k chr15 650 408 622575 622820 C 243 0.00 1061 reject_low 4 ALIGNMENT 20 YS2-3m23.p1k chr15 697 651 622528 622574 C 47 80.85 1061 reject_low 4 ALIGNMENT 930 YS2-3m23.p1k chr04 1060 28 468200 469225 C 1033 97.87 1061 accept 0 ALIGNMENT 82 YS2-3m23.p1k chr16 149 430 447216 447497 F 282 76.95 1061 reject_low 3 ALIGNMENT 0 YS2-3m23.p1k chr15 171 62 623057 623056 C 110 0.00 1061 reject_low 4 ALIGNMENT 0 YS2-3m23.p1k chr16 431 585 447498 447652 F 155 0.00 1061 reject_low 3 ALIGNMENT 0 YS2-3m23.p1k chr15 833 698 622529 622528 C 136 0.00 1061 reject_low 4 ALIGNMENT 121 YS2-3m23.p1k chr14 709 140 767631 768200 C 570 74.21 1061 reject_low 2 ALIGNMENT 887 YS2-3n03.q1k chr06 31 1090 257625 258684 F 1060 95.85 1328 accept 0 ALIGNMENT 725 YS2-3n03.p1k chr06 972 28 261742 262675 C 945 94.39 1096 accept 0 ALIGNMENT 542 YS2-3n05.p1k chr08 913 113 271349 272160 C 801 91.39 1217 accept 0 ALIGNMENT 924 YS2-3n05.q1k chr08 28 1140 269358 270480 F 1113 95.87 1305 accept 0 ALIGNMENT 40 YS2-3n06.q1k chr12 356 828 290445 290917 F 473 70.82 1345 reject_low 4 ALIGNMENT 0 YS2-3n06.q1k chr12 62 355 290445 290444 F 294 0.00 1345 reject_low 4 ALIGNMENT 125 YS2-3n06.q1k chr08 827 346 288111 288592 C 482 75.73 1345 reject_low 3 ALIGNMENT 736 YS2-3n06.q1k chr09 25 1053 19388 20415 F 1029 91.45 1345 reject_low 1 ALIGNMENT 0 YS2-3n06.q1k chr08 345 62 288593 288592 C 284 0.00 1345 reject_low 3 ALIGNMENT 684 YS2-3n06.q1k chr10 25 1119 19370 20460 F 1095 88.40 1345 reject_low 2 ALIGNMENT 802 YS2-3n06.q1k chr15 25 1119 25143 26235 F 1095 91.87 1345 accept_tel 0 ALIGNMENT 231 YS2-3n07.p1k chr05 30 272 244926 245169 F 243 99.59 290 accept 0 ALIGNMENT 302 YS2-3n07.q1k vc_1 1 303 2689 2991 F 303 100.00 913 reject_vc 4 ALIGNMENT 65 YS2-3n07.q1k vc_4 304 238 46 112 C 67 100.00 913 reject_low 9 ALIGNMENT 0 YS2-3n07.q1k vc_7 53 54 5172 6360 C 0 0.00 913 reject_low 8 ALIGNMENT 0 YS2-3n07.q1k vc_4 305 307 1615 1878 F 3 0.00 913 reject_low 7 ALIGNMENT 94 YS2-3n07.q1k vc_7 422 305 4583 4699 C 118 94.07 913 reject_low 8 ALIGNMENT 0 YS2-3n07.q1k vc_4 62 237 1548 1547 F 176 0.00 913 reject_low 7 ALIGNMENT 469 YS2-3n07.q1k vc_5 1 694 2556 3231 F 694 91.07 913 reject_vc 1 ALIGNMENT 247 YS2-3n07.q1k vc_7 303 53 4922 5172 C 251 99.60 913|0,1 reject_low 8 ALIGNMENT 51 YS2-3n07.q1k vc_7 54 3 6360 6411 C 52 100.00 913|1,0 reject_low 8 ALIGNMENT 302 YS2-3n07.q1k vc_3 1 303 2689 2991 F 303 100.00 913 reject_vc 6 ALIGNMENT 469 YS2-3n07.q1k vc_7 694 1 1894 2569 C 694 91.07 913 reject_vc 2 ALIGNMENT 0 YS2-3n07.q1k vc_4 237 62 6340 6339 C 176 0.00 913 reject_low 10 ALIGNMENT 159 YS2-3n07.q1k vc_4 308 694 1879 2247 F 387 83.98 913 reject_low 7 ALIGNMENT 302 YS2-3n07.q1k vc_2 1 303 2322 2624 F 303 100.00 913 reject_vc 5 ALIGNMENT 0 YS2-3n07.p1k chr05 273 290 245169 245168 F 18 0.00 290 accept 0 ALIGNMENT 65 YS2-3n07.q1k vc_4 238 304 1548 1614 F 67 100.00 913 reject_low 7 ALIGNMENT 391 YS2-3n07.q1k vc_4 422 1 5232 5654 C 422 97.87 913 reject_vc 3 ALIGNMENT 0 YS2-3n07.q1k vc_4 237 62 113 112 C 176 0.00 913 reject_low 9 ALIGNMENT 65 YS2-3n07.q1k vc_4 304 238 6273 6339 C 67 100.00 913 reject_low 10 ALIGNMENT 0 YS2-3n07.q1k vc_7 304 304 4700 4921 C 1 0.00 913 reject_low 8 ALIGNMENT 0 YS2-3n08.p1k chr01 655 62 177493 177492 C 594 0.00 1189 reject_low 1 ALIGNMENT 789 YS2-3n08.q1k chr06 25 915 94680 95563 F 891 97.19 1451 accept 0 ALIGNMENT 960 YS2-3n08.p1k chr06 1167 36 99554 100682 C 1132 95.85 1189 accept 0 ALIGNMENT 82 YS2-3n08.p1k chr01 1146 656 177002 177492 C 491 74.54 1189 reject_low 1 ALIGNMENT 377 YS2-3n09.q1k chr12 507 33 451419 451905 C 475 95.16 1354 reject_low 1 ALIGNMENT 107 YS2-3n09.q1k chr12 152 33 489754 489873 C 120 97.50 1354 reject_low 2 ALIGNMENT 0 YS2-3n09.q1k chr12 701 153 489755 489754 C 549 0.00 1354 reject_low 2 ALIGNMENT 648 YS2-3n09.q1k chr12 1131 33 459922 461042 C 1099 88.90 1354 accept 0 ALIGNMENT 0 YS2-3n09.q1k chr12 701 508 451420 451419 C 194 0.00 1354 reject_low 1 ALIGNMENT 137 YS2-3n11.q1k chr04 439 33 451340 451746 C 407 78.62 1344 reject_low 1 ALIGNMENT 970 YS2-3n11.q1k chr02 1194 33 239314 240472 C 1162 95.61 1344 accept 0 ALIGNMENT 0 YS2-3n11.q1k chr04 824 440 451341 451340 C 385 0.00 1344 reject_low 1 ALIGNMENT 41 YS2-3n12.p1k chr10 45 97 414909 414963 F 53 94.34 1168 reject_low 9 ALIGNMENT 0 YS2-3n12.p1k chr10 98 822 414963 414962 F 725 0.00 1168 reject_low 9 ALIGNMENT 45 YS2-3n12.p1k chr05 96 45 435740 435792 C 52 96.15 1168 reject_low 5 ALIGNMENT 0 YS2-3n12.p1k chr07 98 822 876480 876479 F 725 0.00 1168 reject_low 3 ALIGNMENT 45 YS2-3n12.p1k chr07 45 97 876427 876480 F 53 96.23 1168 reject_low 3 ALIGNMENT 43 YS2-3n12.p1k chr13 97 45 480612 480664 C 53 96.23 1168 reject_low 8 ALIGNMENT 45 YS2-3n12.p1k chr03 97 45 151272 151325 C 53 96.23 1168 reject_low 2 ALIGNMENT 44 YS2-3n12.p1k chr07 45 97 122301 122355 F 53 96.23 1168 reject_low 7 ALIGNMENT 0 YS2-3n12.p1k chr04 822 98 1352448 1352447 C 725 0.00 1168 reject_low 1 ALIGNMENT 0 YS2-3n12.p1k chr03 822 98 151273 151272 C 725 0.00 1168 reject_low 2 ALIGNMENT 41 YS2-3n12.p1k chr04 45 89 1201768 1201813 F 45 97.78 1168 reject_low 10 ALIGNMENT 874 YS2-3n12.q1k chr07 33 1077 180110 181148 F 1045 95.79 1362 accept 0 ALIGNMENT 45 YS2-3n12.p1k chr11 45 96 202673 202725 F 52 96.15 1168 reject_low 6 ALIGNMENT 0 YS2-3n12.p1k chr13 822 98 480613 480612 C 725 0.00 1168 reject_low 8 ALIGNMENT 0 YS2-3n12.p1k chr05 822 97 135418 135417 C 726 0.00 1168 reject_low 4 ALIGNMENT 953 YS2-3n12.p1k chr07 1152 45 184653 185764 C 1108 96.30 1168 accept 0 ALIGNMENT 0 YS2-3n12.p1k chr04 90 822 1201813 1201812 F 733 0.00 1168 reject_low 10 ALIGNMENT 48 YS2-3n12.p1k chr04 97 45 1352447 1352500 C 53 98.11 1168 reject_low 1 ALIGNMENT 0 YS2-3n12.p1k chr07 98 822 122355 122354 F 725 0.00 1168 reject_low 7 ALIGNMENT 0 YS2-3n12.p1k chr11 97 822 202725 202724 F 726 0.00 1168 reject_low 6 ALIGNMENT 45 YS2-3n12.p1k chr05 96 45 135417 135469 C 52 96.15 1168 reject_low 4 ALIGNMENT 0 YS2-3n12.p1k chr05 822 97 435741 435740 C 726 0.00 1168 reject_low 5 ALIGNMENT 485 YS2-3n13.q1k chr13 772 157 509736 510351 C 616 93.51 1329 reject_low 1 ALIGNMENT 838 YS2-3n13.q1k chr12 1011 33 201749 202717 C 979 96.83 1329 accept 0 ALIGNMENT 772 YS2-3n13.p1k chr12 46 1010 201052 202015 F 965 94.09 1084 accept 0 ALIGNMENT 0 YS2-3n13.q1k chr13 156 62 510352 510351 C 95 0.00 1329 reject_low 1 ALIGNMENT 624 YS2-3n14.q1k scplasm1 1096 26 1740 2797 C 1071 87.96 1326 accept_chi 0 ALIGNMENT 607 YS2-3n14.p1k vc_6 809 32 5263 6037 C 778 94.09 1081 reject_vc 1 ALIGNMENT 584 YS2-3n14.p1k scplasm1 811 58 5568 6318 C 754 93.90 1081 accept_chi 2 ALIGNMENT 0 YS2-3n14.p1k scplasm1 489 58 2 1 C 432 0.00 1081 reject_low 3 ALIGNMENT 26 YS2-3n14.p1k scplasm1 57 32 1 26 C 26 100.00 1081 reject_low 3 ALIGNMENT 937 YS2-3n15.p1k chr10 1119 30 687351 688448 C 1090 96.79 1160 accept 0 ALIGNMENT 902 YS2-3n15.q1k chr10 30 1116 683363 684448 F 1087 95.86 1387 accept 0 ALIGNMENT 209 YS2-3n16.q1k vc_3 1 303 2689 2990 F 303 90.43 610 reject_low 11 ALIGNMENT 0 YS2-3n16.p1k vc_4 62 553 5871 5870 F 492 0.00 1099 reject_low 7 ALIGNMENT 240 YS2-3n16.q1k vc_7 423 1 2139 2569 C 423 86.76 610 reject_low 2 ALIGNMENT 0 YS2-3n16.p1k vc_3 553 62 2106 2105 C 492 0.00 1099 reject_low 6 ALIGNMENT 0 YS2-3n16.p1k vc_1 553 62 2473 2472 C 492 0.00 1099 reject_low 13 ALIGNMENT 0 YS2-3n16.p1k vc_3 626 588 2439 2438 C 39 0.00 1099 reject_low 14 ALIGNMENT 243 YS2-3n16.q1k vc_5 1 464 2556 3033 F 464 85.99 610 reject_low 1 ALIGNMENT 154 YS2-3n16.q1k vc_7 303 53 4923 5172 C 251 88.05 610|0,1 reject_low 12 ALIGNMENT 0 YS2-3n16.p1k vc_3 553 62 2473 2472 C 492 0.00 1099 reject_low 14 ALIGNMENT 0 YS2-3n16.p1k vc_7 62 553 100 99 F 492 0.00 1099 reject_low 2 ALIGNMENT 0 YS2-3n16.p1k chr14 626 537 281418 281417 C 90 0.00 1099 accept 0 ALIGNMENT 0 YS2-3n16.q1k vc_7 53 54 5172 6360 C 0 0.00 610 reject_low 12 ALIGNMENT 247 YS2-3n16.p1k vc_5 956 554 4630 5025 C 403 89.08 1099 reject_low 1 ALIGNMENT 228 YS2-3n16.q1k vc_4 371 1 5279 5654 C 371 88.14 610 reject_low 8 ALIGNMENT 51 YS2-3n16.q1k vc_7 54 3 6360 6411 C 52 100.00 610|1,0 reject_low 12 ALIGNMENT 0 YS2-3n16.p1k vc_1 626 588 2439 2438 C 39 0.00 1099 reject_low 13 ALIGNMENT 248 YS2-3n16.p1k vc_7 554 956 100 495 F 403 89.08 1099 reject_low 2 ALIGNMENT 247 YS2-3n16.p1k vc_1 956 554 1710 2105 C 403 89.08 1099 reject_low 4 ALIGNMENT 0 YS2-3n16.p1k vc_7 62 553 13562 13561 F 492 0.00 1099 reject_low 3 ALIGNMENT 209 YS2-3n16.q1k vc_1 1 303 2689 2990 F 303 90.43 610 reject_low 9 ALIGNMENT 0 YS2-3n16.p1k vc_2 553 62 2106 2105 C 492 0.00 1099 reject_low 5 ALIGNMENT 28 YS2-3n16.p1k vc_1 587 554 2438 2472 C 34 94.12 1099 reject_low 13 ALIGNMENT 247 YS2-3n16.p1k vc_2 956 554 1710 2105 C 403 89.08 1099 reject_low 5 ALIGNMENT 248 YS2-3n16.p1k vc_7 554 956 13562 13957 F 403 89.08 1099 reject_low 3 ALIGNMENT 0 YS2-3n16.p1k vc_5 553 62 5026 5025 C 492 0.00 1099 reject_low 1 ALIGNMENT 486 YS2-3n16.p1k chr14 536 35 281417 281921 C 502 99.40 1099 accept 0 ALIGNMENT 247 YS2-3n16.p1k vc_3 956 554 1710 2105 C 403 89.08 1099 reject_low 6 ALIGNMENT 0 YS2-3n16.p1k vc_1 553 62 2106 2105 C 492 0.00 1099 reject_low 4 ALIGNMENT 209 YS2-3n16.q1k vc_2 1 303 2322 2623 F 303 90.43 610 reject_low 10 ALIGNMENT 243 YS2-3n16.p1k vc_4 554 881 5871 6198 F 328 92.38 1099 reject_low 7 ALIGNMENT 28 YS2-3n16.p1k vc_3 587 554 2438 2472 C 34 94.12 1099 reject_low 14 ALIGNMENT 964 YS2-3n17.q1k chr14 28 1191 590997 592156 F 1164 95.36 1280 accept 0 ALIGNMENT 947 YS2-3n18.p1k chr08 1133 28 481476 482590 C 1106 95.93 1136 accept 0 ALIGNMENT 789 YS2-3n18.q1k chr08 27 955 477667 478581 F 929 97.09 1376 accept 0 ALIGNMENT 854 YS2-3n19.q1k chr13 29 1020 565948 566933 F 992 96.77 1342 accept 0 ALIGNMENT 649 YS2-3n19.p1k chr13 949 57 567930 568808 C 893 92.95 1119 accept 0 ALIGNMENT 903 YS2-3n20.q1k chr14 1114 28 634048 635136 C 1087 95.22 1282 accept_chi 0 ALIGNMENT 602 YS2-3n20.p1k chr04 28 812 1403313 1404112 F 785 92.99 1028 accept_chi 1 ALIGNMENT 0 YS2-3n21.p1k chr04 810 62 1530489 1530488 C 749 0.00 1118 reject_low 87 ALIGNMENT 0 YS2-3n21.p1k chr04 777 62 1530342 1530341 C 716 0.00 1118 reject_low 48 ALIGNMENT 25 YS2-3n21.p1k chr15 1001 923 1089574 1089650 C 79 79.75 1118 reject_low 136 ALIGNMENT 0 YS2-3n21.p1k chr16 564 798 944040 944039 F 235 0.00 1118 reject_low 15 ALIGNMENT 0 YS2-3n21.p1k chr10 62 769 1880 1879 F 708 0.00 1118 reject_low 76 ALIGNMENT 0 YS2-3n21.p1k chr04 564 798 1526975 1526974 F 235 0.00 1118 reject_low 9 ALIGNMENT 82 YS2-3n21.p1k chr15 947 811 1089518 1089653 C 137 89.05 1118 reject_low 90 ALIGNMENT 87 YS2-3n21.p1k chr02 786 1025 1677 1913 F 240 80.83 1118 reject_low 60 ALIGNMENT 777 YS2-3n21.q1k chr14 1023 33 4605 5591 C 991 93.84 1277 reject_low 20 ALIGNMENT 109 YS2-3n21.p1k chr02 775 999 2170 2391 F 225 85.33 1118 reject_low 54 ALIGNMENT 0 YS2-3n21.p1k chr13 62 774 1703 1702 F 713 0.00 1118 reject_low 36 ALIGNMENT 0 YS2-3n21.p1k chr04 773 62 1530238 1530237 C 712 0.00 1118 reject_low 108 ALIGNMENT 87 YS2-3n21.p1k chr02 775 912 1522 1659 F 138 89.86 1118 reject_low 85 ALIGNMENT 0 YS2-3n21.p1k chr02 62 810 1486 1485 F 749 0.00 1118 reject_low 86 ALIGNMENT 0 YS2-3n21.p1k chr07 774 62 1089323 1089322 C 713 0.00 1118 reject_low 78 ALIGNMENT 123 YS2-3n21.p1k chr10 775 975 1741 1939 F 201 89.55 1118 reject_low 51 ALIGNMENT 0 YS2-3n21.p1k chr10 62 561 1456 1455 F 500 0.00 1118 reject_low 1 ALIGNMENT 0 YS2-3n21.p1k chr07 785 62 1089060 1089059 C 724 0.00 1118 reject_low 124 ALIGNMENT 0 YS2-3n21.p1k chr09 62 846 1686 1685 F 785 0.00 1118 reject_low 52 ALIGNMENT 0 YS2-3n21.p1k chr10 62 774 1957 1956 F 713 0.00 1118 reject_low 44 ALIGNMENT 0 YS2-3n21.p1k chr02 62 774 1738 1737 F 713 0.00 1118 reject_low 84 ALIGNMENT 59 YS2-3n21.p1k chr10 775 889 2101 2215 F 115 86.09 1118 reject_low 106 ALIGNMENT 107 YS2-3n21.p1k chr13 778 1025 1814 2058 F 248 83.06 1118 reject_low 46 ALIGNMENT 0 YS2-3n21.p1k chr13 62 810 1667 1666 F 749 0.00 1118 reject_low 89 ALIGNMENT 91 YS2-3n21.p1k chr04 999 775 1530087 1530308 C 225 82.67 1118 reject_low 68 ALIGNMENT 22 YS2-3n21.p1k chr09 923 947 1689 1713 F 25 96.00 1118 reject_low 140 ALIGNMENT 59 YS2-3n21.p1k chr07 889 775 1088992 1089106 C 115 86.09 1118 reject_low 104 ALIGNMENT 581 YS2-3n21.q1k chr08 663 33 3743 4373 C 631 97.94 1277 reject_low 29 ALIGNMENT 0 YS2-3n21.p1k chr13 62 922 1670 1669 F 861 0.00 1118 reject_low 133 ALIGNMENT 59 YS2-3n21.p1k chr07 926 774 1088992 1089143 C 153 82.35 1118 reject_low 99 ALIGNMENT 452 YS2-3n21.p1k chr12 27 495 1066088 1066556 F 469 99.15 1118 reject_low 26 ALIGNMENT 87 YS2-3n21.p1k chr02 770 999 1769 1995 F 230 81.74 1118 reject_low 61 ALIGNMENT 56 YS2-3n21.p1k chr02 786 912 2217 2343 F 127 83.46 1118 reject_low 116 ALIGNMENT 513 YS2-3n21.p1k chr04 27 563 1526439 1526975 F 537 98.88 1118 reject_low 9 ALIGNMENT 0 YS2-3n21.p1k chr02 798 564 4339 4338 C 235 0.00 1118 reject_low 16 ALIGNMENT 0 YS2-3n21.p1k chr12 564 798 1066592 1066591 F 235 0.00 1118 reject_low 26 ALIGNMENT 0 YS2-3n21.p1k chr09 62 769 1897 1896 F 708 0.00 1118 reject_low 75 ALIGNMENT 100 YS2-3n21.p1k chr09 775 1048 1722 1990 F 274 81.39 1118 reject_low 38 ALIGNMENT 0 YS2-3n21.p1k chr09 62 774 1758 1757 F 713 0.00 1118 reject_low 50 ALIGNMENT 0 YS2-3n21.q1k chr08 664 708 558619 558618 F 45 0.00 1277 reject_low 32 ALIGNMENT 118 YS2-3n21.p1k chr09 775 1025 1974 2221 F 251 84.46 1118 reject_low 43 ALIGNMENT 21 YS2-3n21.p1k chr12 543 563 1066572 1066592 F 21 100.00 1118 reject_low 26 ALIGNMENT 0 YS2-3n21.p1k chr02 62 774 1918 1917 F 713 0.00 1118 reject_low 64 ALIGNMENT 0 YS2-3n21.p1k chr15 785 62 1089427 1089426 C 724 0.00 1118 reject_low 120 ALIGNMENT 0 YS2-3n21.p1k chr10 798 564 5460 5459 C 235 0.00 1118 reject_low 8 ALIGNMENT 0 YS2-3n21.p1k chr10 62 922 1672 1671 F 861 0.00 1118 reject_low 141 ALIGNMENT 84 YS2-3n21.p1k chr10 775 1001 1777 2000 F 227 81.50 1118 reject_low 74 ALIGNMENT 0 YS2-3n21.p1k chr07 777 62 1089284 1089283 C 716 0.00 1118 reject_low 121 ALIGNMENT 42 YS2-3n21.p1k chr13 786 875 2002 2091 F 90 84.44 1118 reject_low 125 ALIGNMENT 72 YS2-3n21.p1k chr09 775 912 2046 2183 F 138 86.23 1118 reject_low 94 ALIGNMENT 0 YS2-3n21.p1k chr02 62 773 1881 1880 F 712 0.00 1118 reject_low 58 ALIGNMENT 0 YS2-3n21.p1k chr07 777 62 1089248 1089247 C 716 0.00 1118 reject_low 45 ALIGNMENT 49 YS2-3n21.p1k chr13 778 912 1778 1912 F 135 80.74 1118 reject_low 122 ALIGNMENT 154 YS2-3n21.p1k chr13 775 1048 1703 1971 F 274 87.96 1118 reject_low 36 ALIGNMENT 0 YS2-3n21.p1k chr10 62 774 1849 1848 F 713 0.00 1118 reject_low 93 ALIGNMENT 44 YS2-3n21.p1k chr10 886 1048 1672 1829 F 163 78.53 1118 reject_low 82 ALIGNMENT 581 YS2-3n21.q1k chr13 663 33 3887 4517 C 631 97.94 1277 reject_low 5 ALIGNMENT 0 YS2-3n21.p1k chr10 62 774 2101 2100 F 713 0.00 1118 reject_low 106 ALIGNMENT 0 YS2-3n21.p1k chr02 62 774 2026 2025 F 713 0.00 1118 reject_low 37 ALIGNMENT 59 YS2-3n21.p1k chr09 775 889 2118 2232 F 115 86.09 1118 reject_low 105 ALIGNMENT 101 YS2-3n21.p1k chr02 774 999 1953 2175 F 226 84.07 1118 reject_low 59 ALIGNMENT 0 YS2-3n21.p1k chr10 62 774 2065 2064 F 713 0.00 1118 reject_low 98 ALIGNMENT 0 YS2-3n21.p1k chr07 774 62 1089215 1089214 C 713 0.00 1118 reject_low 66 ALIGNMENT 108 YS2-3n21.p1k chr02 778 1001 1597 1817 F 224 85.27 1118 reject_low 57 ALIGNMENT 94 YS2-3n21.p1k chr07 999 775 1088993 1089214 C 225 83.11 1118 reject_low 66 ALIGNMENT 0 YS2-3n21.p1k chr04 774 62 1530201 1530200 C 713 0.00 1118 reject_low 112 ALIGNMENT 0 YS2-3n21.p1k chr02 62 777 1705 1704 F 716 0.00 1118 reject_low 83 ALIGNMENT 0 YS2-3n21.p1k chr02 62 561 1273 1272 F 500 0.00 1118 reject_low 6 ALIGNMENT 35 YS2-3n21.p1k chr07 839 774 1088970 1089035 C 66 86.36 1118 reject_low 129 ALIGNMENT 58 YS2-3n21.p1k chr02 775 926 2242 2392 F 152 82.24 1118 reject_low 103 ALIGNMENT 90 YS2-3n21.p1k chr09 786 999 2021 2231 F 214 83.18 1118 reject_low 71 ALIGNMENT 72 YS2-3n21.p1k chr10 847 1048 1669 1865 F 202 81.19 1118 reject_low 53 ALIGNMENT 72 YS2-3n21.p1k chr10 775 912 2029 2166 F 138 86.23 1118 reject_low 95 ALIGNMENT 0 YS2-3n21.q1k chr02 708 664 4213 4212 C 45 0.00 1277 reject_low 6 ALIGNMENT 25 YS2-3n21.p1k chr04 1001 923 1530409 1530485 C 79 79.75 1118 reject_low 134 ALIGNMENT 0 YS2-3n21.p1k chr12 798 564 9673 9672 C 235 0.00 1118 reject_low 14 ALIGNMENT 48 YS2-3n21.p1k chr15 1001 778 1089322 1089542 C 224 76.34 1118 reject_low 115 ALIGNMENT 0 YS2-3n21.p1k chr15 774 62 1089618 1089617 C 713 0.00 1118 reject_low 34 ALIGNMENT 0 YS2-3n21.p1k chr10 62 774 2029 2028 F 713 0.00 1118 reject_low 95 ALIGNMENT 0 YS2-3n21.p1k chr15 774 62 1089474 1089473 C 713 0.00 1118 reject_low 69 ALIGNMENT 104 YS2-3n21.p1k chr02 774 999 1881 2103 F 226 84.51 1118 reject_low 58 ALIGNMENT 384 YS2-3n21.p1k chr02 562 975 1273 1684 F 414 98.55 1118 reject_low 6 ALIGNMENT 0 YS2-3n21.p1k chr02 62 773 1845 1844 F 712 0.00 1118 reject_low 70 ALIGNMENT 0 YS2-3n21.p1k chr04 785 62 1530262 1530261 C 724 0.00 1118 reject_low 119 ALIGNMENT 0 YS2-3n21.p1k chr04 561 62 1530702 1530701 C 500 0.00 1118 accept_tel 0 ALIGNMENT 0 YS2-3n21.p1k chr09 62 774 1866 1865 F 713 0.00 1118 reject_low 92 ALIGNMENT 0 YS2-3n21.p1k chr09 62 785 2021 2020 F 724 0.00 1118 reject_low 71 ALIGNMENT 59 YS2-3n21.p1k chr13 774 926 1918 2069 F 153 82.35 1118 reject_low 100 ALIGNMENT 572 YS2-3n21.q1k chr05 1004 33 4628 5546 C 972 89.20 1277 reject_low 25 ALIGNMENT 75 YS2-3n21.p1k chr09 775 912 1866 2003 F 138 86.96 1118 reject_low 92 ALIGNMENT 76 YS2-3n21.p1k chr09 770 944 1897 2070 F 175 83.43 1118 reject_low 75 ALIGNMENT 0 YS2-3n21.p1k chr02 62 774 2170 2169 F 713 0.00 1118 reject_low 54 ALIGNMENT 777 YS2-3n21.q1k chr07 33 1023 1085377 1086363 F 991 93.84 1277 reject_low 3 ALIGNMENT 586 YS2-3n21.q1k chr16 33 663 943535 944166 F 631 98.26 1277 reject_low 27 ALIGNMENT 0 YS2-3n21.p1k chr07 810 62 1089395 1089394 C 749 0.00 1118 reject_low 88 ALIGNMENT 0 YS2-3n21.p1k chr04 774 62 1530417 1530416 C 713 0.00 1118 reject_low 77 ALIGNMENT 82 YS2-3n21.p1k chr02 811 947 1486 1621 F 137 89.05 1118 reject_low 86 ALIGNMENT 160 YS2-3n21.p1k chr04 1064 775 1530169 1530452 C 290 87.24 1118 reject_low 33 ALIGNMENT 0 YS2-3n21.p1k chr13 62 777 1778 1777 F 716 0.00 1118 reject_low 122 ALIGNMENT 0 YS2-3n21.p1k chr05 564 798 571804 571803 F 235 0.00 1118 reject_low 21 ALIGNMENT 0 YS2-3n21.p1k chr02 62 774 1522 1521 F 713 0.00 1118 reject_low 85 ALIGNMENT 72 YS2-3n21.p1k chr09 811 1048 1686 1918 F 238 79.41 1118 reject_low 55 ALIGNMENT 32 YS2-3n21.p1k chr02 786 839 2361 2414 F 54 88.89 1118 reject_low 139 ALIGNMENT 100 YS2-3n21.p1k chr09 775 1048 1830 2098 F 274 81.39 1118 reject_low 39 ALIGNMENT 0 YS2-3n21.p1k chr13 62 773 1918 1917 F 712 0.00 1118 reject_low 100 ALIGNMENT 513 YS2-3n21.p1k chr15 27 563 1085604 1086140 F 537 98.88 1118 reject_low 12 ALIGNMENT 105 YS2-3n21.p1k chr15 1025 778 1089262 1089506 C 248 82.66 1118 reject_low 49 ALIGNMENT 0 YS2-3n21.p1k chr15 774 62 1089366 1089365 C 713 0.00 1118 reject_low 113 ALIGNMENT 62 YS2-3n21.p1k chr02 774 1048 1845 2114 F 275 76.73 1118 reject_low 70 ALIGNMENT 0 YS2-3n21.p1k chr10 62 885 1672 1671 F 824 0.00 1118 reject_low 82 ALIGNMENT 0 YS2-3n21.p1k chr15 773 62 1089403 1089402 C 712 0.00 1118 reject_low 109 ALIGNMENT 806 YS2-3n21.q1k chr12 33 1013 1072672 1073648 F 981 95.11 1277 reject_low 19 ALIGNMENT 35 YS2-3n21.p1k chr15 839 774 1089229 1089294 C 66 86.36 1118 reject_low 131 ALIGNMENT 513 YS2-3n21.p1k chr08 563 27 3869 4405 C 537 98.88 1118 reject_low 10 ALIGNMENT 82 YS2-3n21.p1k chr07 947 811 1089259 1089394 C 137 89.05 1118 reject_low 88 ALIGNMENT 0 YS2-3n21.p1k chr13 62 777 1814 1813 F 716 0.00 1118 reject_low 46 ALIGNMENT 0 YS2-3n21.p1k chr13 62 773 2026 2025 F 712 0.00 1118 reject_low 130 ALIGNMENT 0 YS2-3n21.p1k chr15 564 798 1086140 1086139 F 235 0.00 1118 reject_low 12 ALIGNMENT 109 YS2-3n21.p1k chr02 775 1048 2026 2294 F 274 82.48 1118 reject_low 37 ALIGNMENT 510 YS2-3n21.p1k chr12 563 27 4137 4673 C 537 98.70 1118 reject_low 13 ALIGNMENT 90 YS2-3n21.p1k chr10 786 999 2004 2214 F 214 83.18 1118 reject_low 72 ALIGNMENT 33 YS2-3n21.p1k chr10 774 841 2172 2239 F 68 85.29 1118 reject_low 138 ALIGNMENT 0 YS2-3n21.p1k chr07 774 62 1089107 1089106 C 713 0.00 1118 reject_low 104 ALIGNMENT 49 YS2-3n21.p1k chr07 912 778 1089149 1089283 C 135 80.74 1118 reject_low 121 ALIGNMENT 0 YS2-3n21.q1k chr08 708 664 3744 3743 C 45 0.00 1277 reject_low 29 ALIGNMENT 0 YS2-3n21.p1k chr15 777 62 1089543 1089542 C 716 0.00 1118 reject_low 115 ALIGNMENT 0 YS2-3n21.p1k chr02 62 785 1677 1676 F 724 0.00 1118 reject_low 60 ALIGNMENT 582 YS2-3n21.q1k chr06 661 33 3050 3679 C 629 98.09 1277 reject_low 28 ALIGNMENT 501 YS2-3n21.p1k chr08 27 563 557957 558493 F 537 98.14 1118 reject_low 17 ALIGNMENT 98 YS2-3n21.p1k chr09 786 1001 1949 2161 F 216 84.26 1118 reject_low 62 ALIGNMENT 59 YS2-3n21.p1k chr13 775 889 1955 2069 F 115 86.09 1118 reject_low 107 ALIGNMENT 0 YS2-3n21.p1k chr15 777 62 1089507 1089506 C 716 0.00 1118 reject_low 49 ALIGNMENT 0 YS2-3n21.q1k chr12 708 664 9547 9546 C 45 0.00 1277 reject_low 31 ALIGNMENT 120 YS2-3n21.p1k chr02 786 1025 2145 2381 F 240 85.42 1118 reject_low 42 ALIGNMENT 56 YS2-3n21.p1k chr13 786 912 1894 2020 F 127 83.46 1118 reject_low 118 ALIGNMENT 35 YS2-3n21.p1k chr04 839 774 1530064 1530129 C 66 86.36 1118 reject_low 128 ALIGNMENT 42 YS2-3n21.p1k chr04 875 786 1530064 1530153 C 90 84.44 1118 reject_low 123 ALIGNMENT 0 YS2-3n21.p1k chr13 62 774 1847 1846 F 713 0.00 1118 reject_low 67 ALIGNMENT 123 YS2-3n21.p1k chr09 775 975 1758 1956 F 201 89.55 1118 reject_low 50 ALIGNMENT 26 YS2-3n21.p1k chr02 923 1001 1489 1565 F 79 79.75 1118 reject_low 132 ALIGNMENT 105 YS2-3n21.p1k chr04 1025 778 1530097 1530341 C 248 82.66 1118 reject_low 48 ALIGNMENT 581 YS2-3n21.q1k chr12 663 33 9546 10176 C 631 97.94 1277 reject_low 31 ALIGNMENT 44 YS2-3n21.p1k chr09 886 1048 1689 1846 F 163 78.53 1118 reject_low 81 ALIGNMENT 0 YS2-3n21.p1k chr02 62 785 2361 2360 F 724 0.00 1118 reject_low 139 ALIGNMENT 84 YS2-3n21.p1k chr09 775 1001 1794 2017 F 227 81.50 1118 reject_low 73 ALIGNMENT 0 YS2-3n21.p1k chr07 773 62 1089036 1089035 C 712 0.00 1118 reject_low 129 ALIGNMENT 42 YS2-3n21.p1k chr15 875 786 1089229 1089318 C 90 84.44 1118 reject_low 126 ALIGNMENT 510 YS2-3n21.p1k chr12 563 27 9672 10208 C 537 98.70 1118 reject_low 14 ALIGNMENT 0 YS2-3n21.p1k chr09 62 561 1473 1472 F 500 0.00 1118 reject_low 4 ALIGNMENT 0 YS2-3n21.p1k chr09 62 774 1974 1973 F 713 0.00 1118 reject_low 43 ALIGNMENT 0 YS2-3n21.p1k chr09 62 774 1794 1793 F 713 0.00 1118 reject_low 73 ALIGNMENT 56 YS2-3n21.p1k chr02 775 889 2278 2392 F 115 85.22 1118 reject_low 111 ALIGNMENT 0 YS2-3n21.p1k chr12 496 542 1066557 1066571 F 47 0.00 1118 reject_low 26 ALIGNMENT 304 YS2-3n21.p1k chr10 562 944 1456 1837 F 383 93.99 1118 reject_low 1 ALIGNMENT 0 YS2-3n21.p1k chr04 785 62 1530154 1530153 C 724 0.00 1118 reject_low 123 ALIGNMENT 0 YS2-3n21.p1k chr09 62 785 1949 1948 F 724 0.00 1118 reject_low 62 ALIGNMENT 67 YS2-3n21.p1k chr02 775 1048 1918 2186 F 274 77.37 1118 reject_low 64 ALIGNMENT 0 YS2-3n21.p1k chr04 773 62 1530130 1530129 C 712 0.00 1118 reject_low 128 ALIGNMENT 82 YS2-3n21.p1k chr04 947 811 1530353 1530488 C 137 89.05 1118 reject_low 87 ALIGNMENT 0 YS2-3n21.p1k chr02 62 785 2145 2144 F 724 0.00 1118 reject_low 42 ALIGNMENT 26 YS2-3n21.p1k chr13 923 1001 1670 1746 F 79 79.75 1118 reject_low 133 ALIGNMENT 513 YS2-3n21.p1k chr12 27 563 1072640 1073176 F 537 98.88 1118 reject_low 11 ALIGNMENT 304 YS2-3n21.p1k chr09 562 944 1473 1854 F 383 93.99 1118 reject_low 4 ALIGNMENT 0 YS2-3n21.p1k chr02 62 769 1769 1768 F 708 0.00 1118 reject_low 61 ALIGNMENT 0 YS2-3n21.p1k chr13 62 785 1894 1893 F 724 0.00 1118 reject_low 118 ALIGNMENT 0 YS2-3n21.p1k chr09 62 774 2118 2117 F 713 0.00 1118 reject_low 105 ALIGNMENT 0 YS2-3n21.p1k chr10 62 810 1669 1668 F 749 0.00 1118 reject_low 56 ALIGNMENT 364 YS2-3n21.p1k chr04 947 562 1530317 1530701 C 386 98.96 1118 accept_tel 0 ALIGNMENT 0 YS2-3n21.p1k chr02 62 774 2278 2277 F 713 0.00 1118 reject_low 111 ALIGNMENT 0 YS2-3n21.p1k chr09 62 774 1722 1721 F 713 0.00 1118 reject_low 38 ALIGNMENT 364 YS2-3n21.p1k chr13 562 947 1454 1838 F 386 98.96 1118 reject_low 5 ALIGNMENT 33 YS2-3n21.p1k chr09 774 841 2189 2256 F 68 85.29 1118 reject_low 137 ALIGNMENT 525 YS2-3n21.p1k chr10 563 27 5459 5995 C 537 99.63 1118 reject_low 8 ALIGNMENT 155 YS2-3n21.p1k chr07 1048 775 1089090 1089358 C 274 87.96 1118 reject_low 35 ALIGNMENT 98 YS2-3n21.p1k chr10 786 1001 1932 2144 F 216 84.26 1118 reject_low 63 ALIGNMENT 120 YS2-3n21.p1k chr02 775 1001 1630 1853 F 227 86.78 1118 reject_low 47 ALIGNMENT 0 YS2-3n21.p1k chr04 777 62 1530378 1530377 C 716 0.00 1118 reject_low 114 ALIGNMENT 82 YS2-3n21.p1k chr07 999 775 1089101 1089322 C 225 81.33 1118 reject_low 78 ALIGNMENT 509 YS2-3n21.p1k chr16 27 563 943503 944040 F 537 98.70 1118 reject_low 15 ALIGNMENT 0 YS2-3n21.p1k chr07 785 62 1089168 1089167 C 724 0.00 1118 reject_low 117 ALIGNMENT 72 YS2-3n21.p1k chr09 847 1048 1686 1882 F 202 81.19 1118 reject_low 52 ALIGNMENT 0 YS2-3n21.p1k chr10 62 773 2172 2171 F 712 0.00 1118 reject_low 138 ALIGNMENT 0 YS2-3n21.p1k chr09 798 564 5477 5476 C 235 0.00 1118 reject_low 7 ALIGNMENT 364 YS2-3n21.p1k chr15 947 562 1089482 1089866 C 386 98.96 1118 reject_low 2 ALIGNMENT 71 YS2-3n21.p1k chr02 786 912 2073 2199 F 127 87.40 1118 reject_low 96 ALIGNMENT 0 YS2-3n21.p1k chr08 798 564 3870 3869 C 235 0.00 1118 reject_low 10 ALIGNMENT 0 YS2-3n21.p1k chr09 62 774 1830 1829 F 713 0.00 1118 reject_low 39 ALIGNMENT 0 YS2-3n21.q1k chr16 664 708 944166 944165 F 45 0.00 1277 reject_low 27 ALIGNMENT 0 YS2-3n21.p1k chr10 62 774 1741 1740 F 713 0.00 1118 reject_low 51 ALIGNMENT 0 YS2-3n21.p1k chr02 62 785 2217 2216 F 724 0.00 1118 reject_low 116 ALIGNMENT 0 YS2-3n21.p1k chr10 62 785 1932 1931 F 724 0.00 1118 reject_low 63 ALIGNMENT 0 YS2-3n21.p1k chr10 62 774 1777 1776 F 713 0.00 1118 reject_low 74 ALIGNMENT 67 YS2-3n21.p1k chr10 775 926 2065 2215 F 152 84.21 1118 reject_low 98 ALIGNMENT 46 YS2-3n21.p1k chr09 786 1025 2165 2401 F 240 75.00 1118 reject_low 101 ALIGNMENT 0 YS2-3n21.p1k chr04 922 62 1530486 1530485 C 861 0.00 1118 reject_low 134 ALIGNMENT 364 YS2-3n21.p1k chr07 947 562 1089223 1089607 C 386 98.96 1118 reject_low 3 ALIGNMENT 0 YS2-3n21.p1k chr09 62 773 2189 2188 F 712 0.00 1118 reject_low 137 ALIGNMENT 35 YS2-3n21.p1k chr13 774 839 2026 2091 F 66 86.36 1118 reject_low 130 ALIGNMENT 82 YS2-3n21.p1k chr13 811 947 1667 1802 F 137 89.05 1118 reject_low 89 ALIGNMENT 0 YS2-3n21.p1k chr15 810 62 1089654 1089653 C 749 0.00 1118 reject_low 90 ALIGNMENT 0 YS2-3n21.p1k chr07 922 62 1089392 1089391 C 861 0.00 1118 reject_low 135 ALIGNMENT 25 YS2-3n21.p1k chr07 1001 923 1089315 1089391 C 79 79.75 1118 reject_low 135 ALIGNMENT 822 YS2-3n21.q1k chr04 33 1145 1526471 1527571 F 1113 92.81 1277 accept_tel 0 ALIGNMENT 75 YS2-3n21.p1k chr10 775 912 1849 1986 F 138 86.96 1118 reject_low 93 ALIGNMENT 67 YS2-3n21.p1k chr09 775 926 2082 2232 F 152 84.21 1118 reject_low 97 ALIGNMENT 39 YS2-3n21.p1k chr02 786 875 2325 2414 F 90 83.33 1118 reject_low 127 ALIGNMENT 53 YS2-3n21.p1k chr15 912 786 1089300 1089426 C 127 82.68 1118 reject_low 120 ALIGNMENT 770 YS2-3n21.q1k chr09 937 33 5078 5980 C 905 95.69 1277 reject_low 4 ALIGNMENT 761 YS2-3n21.q1k chr16 937 33 4598 5500 C 905 95.36 1277 reject_low 22 ALIGNMENT 42 YS2-3n21.p1k chr07 875 786 1088970 1089059 C 90 84.44 1118 reject_low 124 ALIGNMENT 0 YS2-3n21.p1k chr04 774 62 1530453 1530452 C 713 0.00 1118 reject_low 33 ALIGNMENT 67 YS2-3n21.p1k chr02 775 1025 1738 1985 F 251 77.69 1118 reject_low 84 ALIGNMENT 0 YS2-3n21.p1k chr15 561 62 1089867 1089866 C 500 0.00 1118 reject_low 2 ALIGNMENT 0 YS2-3n21.p1k chr02 62 785 2073 2072 F 724 0.00 1118 reject_low 96 ALIGNMENT 56 YS2-3n21.p1k chr15 926 774 1089251 1089402 C 153 81.70 1118 reject_low 109 ALIGNMENT 0 YS2-3n21.p1k chr04 774 62 1530309 1530308 C 713 0.00 1118 reject_low 68 ALIGNMENT 0 YS2-3n21.p1k chr07 561 62 1089608 1089607 C 500 0.00 1118 reject_low 3 ALIGNMENT 581 YS2-3n21.q1k chr12 663 33 4011 4641 C 631 97.94 1277 reject_low 30 ALIGNMENT 100 YS2-3n21.p1k chr10 775 1048 1705 1973 F 274 81.39 1118 reject_low 40 ALIGNMENT 76 YS2-3n21.p1k chr10 770 944 1880 2053 F 175 83.43 1118 reject_low 76 ALIGNMENT 578 YS2-3n21.q1k chr02 663 33 4212 4842 C 631 97.78 1277 reject_low 6 ALIGNMENT 0 YS2-3n21.p1k chr07 773 62 1089144 1089143 C 712 0.00 1118 reject_low 99 ALIGNMENT 0 YS2-3n21.p1k chr02 62 774 2242 2241 F 713 0.00 1118 reject_low 103 ALIGNMENT 797 YS2-3n21.q1k chr10 1145 33 4862 5963 C 1113 91.91 1277 reject_low 1 ALIGNMENT 0 YS2-3n21.p1k chr02 62 922 1489 1488 F 861 0.00 1118 reject_low 132 ALIGNMENT 56 YS2-3n21.p1k chr07 912 786 1089041 1089167 C 127 83.46 1118 reject_low 117 ALIGNMENT 818 YS2-3n21.q1k chr15 33 1081 1085636 1086676 F 1049 93.90 1277 reject_low 2 ALIGNMENT 100 YS2-3n21.p1k chr10 775 1048 1813 2081 F 274 81.39 1118 reject_low 41 ALIGNMENT 0 YS2-3n21.p1k chr15 774 62 1089582 1089581 C 713 0.00 1118 reject_low 80 ALIGNMENT 0 YS2-3n21.p1k chr02 62 774 1990 1989 F 713 0.00 1118 reject_low 65 ALIGNMENT 59 YS2-3n21.p1k chr02 786 912 1821 1947 F 127 84.25 1118 reject_low 110 ALIGNMENT 0 YS2-3n21.p1k chr10 62 774 1705 1704 F 713 0.00 1118 reject_low 40 ALIGNMENT 79 YS2-3n21.p1k chr02 778 999 1705 1923 F 222 81.08 1118 reject_low 83 ALIGNMENT 46 YS2-3n21.p1k chr10 786 1025 2148 2384 F 240 75.00 1118 reject_low 102 ALIGNMENT 0 YS2-3n21.p1k chr09 62 885 1689 1688 F 824 0.00 1118 reject_low 81 ALIGNMENT 0 YS2-3n21.p1k chr13 62 785 2002 2001 F 724 0.00 1118 reject_low 125 ALIGNMENT 0 YS2-3n21.p1k chr12 798 564 4138 4137 C 235 0.00 1118 reject_low 13 ALIGNMENT 56 YS2-3n21.p1k chr04 926 774 1530086 1530237 C 153 81.70 1118 reject_low 108 ALIGNMENT 442 YS2-3n21.p1k chr05 27 563 571285 571804 F 537 95.72 1118 reject_low 21 ALIGNMENT 0 YS2-3n21.p1k chr08 564 798 558493 558492 F 235 0.00 1118 reject_low 17 ALIGNMENT 48 YS2-3n21.p1k chr04 1001 778 1530157 1530377 C 224 76.34 1118 reject_low 114 ALIGNMENT 67 YS2-3n21.p1k chr02 775 1048 1990 2258 F 274 77.37 1118 reject_low 65 ALIGNMENT 0 YS2-3n21.p1k chr13 62 774 1955 1954 F 713 0.00 1118 reject_low 107 ALIGNMENT 76 YS2-3n21.p1k chr02 775 944 2098 2266 F 170 84.12 1118 reject_low 91 ALIGNMENT 0 YS2-3n21.q1k chr13 708 664 3888 3887 C 45 0.00 1277 reject_low 5 ALIGNMENT 0 YS2-3n21.p1k chr02 62 777 1597 1596 F 716 0.00 1118 reject_low 57 ALIGNMENT 0 YS2-3n21.p1k chr10 62 774 1813 1812 F 713 0.00 1118 reject_low 41 ALIGNMENT 0 YS2-3n21.p1k chr13 62 561 1454 1453 F 500 0.00 1118 reject_low 5 ALIGNMENT 53 YS2-3n21.p1k chr04 912 786 1530135 1530261 C 127 82.68 1118 reject_low 119 ALIGNMENT 0 YS2-3n21.p1k chr10 62 785 2148 2147 F 724 0.00 1118 reject_low 102 ALIGNMENT 118 YS2-3n21.p1k chr10 775 1025 1957 2204 F 251 84.46 1118 reject_low 44 ALIGNMENT 0 YS2-3n21.p1k chr07 774 62 1089359 1089358 C 713 0.00 1118 reject_low 35 ALIGNMENT 0 YS2-3n21.p1k chr09 62 774 2082 2081 F 713 0.00 1118 reject_low 97 ALIGNMENT 82 YS2-3n21.p1k chr15 999 775 1089360 1089581 C 225 81.33 1118 reject_low 80 ALIGNMENT 160 YS2-3n21.p1k chr15 1064 775 1089334 1089617 C 290 87.24 1118 reject_low 34 ALIGNMENT 0 YS2-3n21.p1k chr09 62 785 2165 2164 F 724 0.00 1118 reject_low 101 ALIGNMENT 108 YS2-3n21.p1k chr07 1025 778 1089003 1089247 C 248 83.06 1118 reject_low 45 ALIGNMENT 82 YS2-3n21.p1k chr13 775 999 1739 1960 F 225 81.33 1118 reject_low 79 ALIGNMENT 525 YS2-3n21.p1k chr09 563 27 5476 6012 C 537 99.63 1118 reject_low 7 ALIGNMENT 0 YS2-3n21.p1k chr15 785 62 1089319 1089318 C 724 0.00 1118 reject_low 126 ALIGNMENT 0 YS2-3n21.p1k chr02 62 785 2325 2324 F 724 0.00 1118 reject_low 127 ALIGNMENT 82 YS2-3n21.p1k chr04 999 775 1530195 1530416 C 225 81.33 1118 reject_low 77 ALIGNMENT 0 YS2-3n21.p1k chr15 773 62 1089295 1089294 C 712 0.00 1118 reject_low 131 ALIGNMENT 0 YS2-3n21.p1k chr02 62 785 1821 1820 F 724 0.00 1118 reject_low 110 ALIGNMENT 0 YS2-3n21.p1k chr09 62 922 1689 1688 F 861 0.00 1118 reject_low 140 ALIGNMENT 0 YS2-3n21.p1k chr15 922 62 1089651 1089650 C 861 0.00 1118 reject_low 136 ALIGNMENT 91 YS2-3n21.p1k chr15 999 775 1089252 1089473 C 225 82.67 1118 reject_low 69 ALIGNMENT 72 YS2-3n21.p1k chr10 811 1048 1669 1901 F 238 79.41 1118 reject_low 56 ALIGNMENT 704 YS2-3n21.q1k chr05 33 1023 571317 572286 F 991 92.03 1277 reject_low 23 ALIGNMENT 0 YS2-3n21.p1k chr16 798 564 4997 4996 C 235 0.00 1118 reject_low 18 ALIGNMENT 0 YS2-3n21.p1k chr09 62 774 2046 2045 F 713 0.00 1118 reject_low 94 ALIGNMENT 0 YS2-3n21.p1k chr12 564 798 1073176 1073175 F 235 0.00 1118 reject_low 11 ALIGNMENT 0 YS2-3n21.p1k chr09 62 810 1686 1685 F 749 0.00 1118 reject_low 55 ALIGNMENT 0 YS2-3n21.p1k chr02 62 773 1953 1952 F 712 0.00 1118 reject_low 59 ALIGNMENT 22 YS2-3n21.p1k chr10 923 947 1672 1696 F 25 96.00 1118 reject_low 141 ALIGNMENT 0 YS2-3n21.q1k chr06 708 662 3051 3050 C 47 0.00 1277 reject_low 28 ALIGNMENT 0 YS2-3n21.p1k chr02 62 774 1630 1629 F 713 0.00 1118 reject_low 47 ALIGNMENT 501 YS2-3n21.p1k chr16 563 27 4996 5532 C 537 98.14 1118 reject_low 18 ALIGNMENT 0 YS2-3n21.p1k chr10 62 846 1669 1668 F 785 0.00 1118 reject_low 53 ALIGNMENT 94 YS2-3n21.p1k chr13 775 999 1847 2068 F 225 83.11 1118 reject_low 67 ALIGNMENT 0 YS2-3n21.p1k chr02 62 774 2098 2097 F 713 0.00 1118 reject_low 91 ALIGNMENT 56 YS2-3n21.p1k chr04 889 775 1530086 1530200 C 115 85.22 1118 reject_low 112 ALIGNMENT 0 YS2-3n21.p1k chr13 62 774 1739 1738 F 713 0.00 1118 reject_low 79 ALIGNMENT 578 YS2-3n21.q1k chr08 33 663 557989 558619 F 631 97.78 1277 reject_low 32 ALIGNMENT 0 YS2-3n21.q1k chr12 708 664 4012 4011 C 45 0.00 1277 reject_low 30 ALIGNMENT 501 YS2-3n21.p1k chr02 563 27 4338 4874 C 537 98.14 1118 reject_low 16 ALIGNMENT 656 YS2-3n21.q1k chr12 33 1023 1066120 1067074 F 991 90.92 1277 reject_low 24 ALIGNMENT 0 YS2-3n21.p1k chr10 62 785 2004 2003 F 724 0.00 1118 reject_low 72 ALIGNMENT 56 YS2-3n21.p1k chr15 889 775 1089251 1089365 C 115 85.22 1118 reject_low 113 ALIGNMENT 833 YS2-3n23.q1k chr14 1007 32 244183 245144 C 976 97.23 1268 accept 0 ALIGNMENT 1037 YS2-3n23.p1k chr14 31 1126 240990 242084 F 1096 98.72 1134 accept 0 ALIGNMENT 928 YS2-3n24.p1k chr10 39 1120 275515 276582 F 1082 96.95 1135 accept 0 ALIGNMENT 750 YS2-3n24.q1k chr10 957 35 277939 278849 C 923 95.45 1292 accept 0 ALIGNMENT 920 YS2-3o01.p1k chr14 1055 30 371206 372230 C 1026 97.66 1056 accept 0 ALIGNMENT 804 YS2-3o01.q1k chr14 25 998 369760 370743 F 974 95.59 1294 accept 0 ALIGNMENT 159 YS2-3o02.p1k chr12 192 26 459849 460015 C 167 100.00 211 accept 0 ALIGNMENT 0 YS2-3o02.p1k chr12 211 193 459850 459849 C 19 0.00 211 accept 0 ALIGNMENT 0 YS2-3o03.p1k chrm 99 625 10806 10805 F 527 0.00 625 reject_low 12 ALIGNMENT 0 YS2-3o03.p1k chrm 625 607 12594 12593 C 19 0.00 625 reject_low 1 ALIGNMENT 0 YS2-3o03.q1k chrm 488 282 44861 44860 C 207 0.00 1338 reject_low 2 ALIGNMENT 0 YS2-3o03.p1k chrm 85 355 34981 44859 F 271 0.00 625 reject_low 11 ALIGNMENT 0 YS2-3o03.p1k chrm 625 548 56705 56704 C 78 0.00 625 reject_low 8 ALIGNMENT 96 YS2-3o03.q1k chrm 90 313 56704 56933 F 224 86.61 1338 reject_low 5 ALIGNMENT 0 YS2-3o03.p1k chrm 323 106 56934 57004 C 218 0.00 625 reject_low 8 ALIGNMENT 45 YS2-3o03.q1k chrm 603 539 10741 10806 C 65 90.77 1338 reject_low 7 ALIGNMENT 129 YS2-3o03.q1k chrm 281 94 44860 45048 C 188 93.09 1338 reject_low 2 ALIGNMENT 0 YS2-3o03.q1k chrm 281 488 12844 12843 F 208 0.00 1338 reject_low 3 ALIGNMENT 44 YS2-3o03.q1k chrm 532 593 57005 57066 F 62 91.94 1338 reject_low 5 ALIGNMENT 0 YS2-3o03.q1k chrm 92 552 71210 71209 F 461 0.00 1338 reject_low 14 ALIGNMENT 0 YS2-3o03.p1k chrm 544 625 45048 45047 F 82 0.00 625 reject_low 11 ALIGNMENT 39 YS2-3o03.p1k chrm 37 84 34933 34980 F 48 95.83 625 reject_low 11 ALIGNMENT 50 YS2-3o03.p1k chrm 37 104 34285 34352 F 68 91.18 625 reject_low 2 ALIGNMENT 35 YS2-3o03.q1k chrm 553 600 71210 71257 F 48 93.75 1338 reject_low 14 ALIGNMENT 0 YS2-3o03.p1k chrm 105 625 34352 34351 F 521 0.00 625 reject_low 2 ALIGNMENT 29 YS2-3o03.q1k chrm 600 557 62860 62903 C 44 93.18 1338 reject_low 17 ALIGNMENT 0 YS2-3o03.q1k chrm 552 92 84534 84533 C 461 0.00 1338 reject_low 4 ALIGNMENT 0 YS2-3o03.q1k chrm 488 220 82326 82325 C 269 0.00 1338 reject_low 6 ALIGNMENT 99 YS2-3o03.q1k chrm 31 280 12593 12844 F 250 85.20 1338 reject_low 3 ALIGNMENT 42 YS2-3o03.p1k chrm 37 123 62860 62948 F 87 85.06 625 reject_low 9 ALIGNMENT 33 YS2-3o03.p1k chrm 39 80 3060 3101 F 42 97.62 625 reject_low 7,10,13 ALIGNMENT 0 YS2-3o03.p1k chrm 85 625 84533 84532 F 541 0.00 625 reject_low 15 ALIGNMENT 96 YS2-3o03.p1k chrm 547 324 56704 56933 C 224 86.61 625 reject_low 8 ALIGNMENT 0 YS2-3o03.q1k chrm 281 552 4377 12264 F 272 0.00 1338 reject_low 1 ALIGNMENT 0 YS2-3o03.p1k chrm 356 62 12845 12844 C 295 0.00 625 reject_low 1 ALIGNMENT 38 YS2-3o03.p1k chrm 81 37 47474 47518 C 45 97.78 625 reject_low 19 ALIGNMENT 0 YS2-3o03.p1k chrm 81 625 3101 3100 F 545 0.00 625 reject_low 7,10,13 ALIGNMENT 0 YS2-3o03.p1k chrm 625 85 9487 9486 C 541 0.00 625 reject_low 16 ALIGNMENT 0 YS2-3o03.q1k chrm 556 92 3102 3101 C 465 0.00 1338 reject_low 13 ALIGNMENT 379 YS2-3o03.q1k chrm 602 91 29837 30344 C 512 97.07 1338 accept 0 ALIGNMENT 30 YS2-3o03.q1k chrm 556 600 47474 47518 F 45 93.33 1338 reject_low 8 ALIGNMENT 45 YS2-3o03.p1k chrm 84 37 12265 12312 C 48 100.00 625 reject_low 20 ALIGNMENT 46 YS2-3o03.p1k chrm 105 42 57005 57068 C 64 92.19 625 reject_low 8 ALIGNMENT 51 YS2-3o03.p1k chrm 35 98 10742 10806 F 64 93.75 625 reject_low 12 ALIGNMENT 25 YS2-3o03.q1k chrm 593 557 3065 3101 C 37 97.30 1338 reject_low 13 ALIGNMENT 105 YS2-3o03.q1k chrm 91 280 4188 4376 F 190 89.47 1338 reject_low 1 ALIGNMENT 38 YS2-3o03.q1k chrm 553 600 12265 12312 F 48 95.83 1338 reject_low 1 ALIGNMENT 0 YS2-3o03.p1k chrm 625 144 71158 71157 C 482 0.00 625 reject_low 5 ALIGNMENT 0 YS2-3o03.q1k chrm 554 92 9076 9075 C 463 0.00 1338 reject_low 10 ALIGNMENT 0 YS2-3o03.q1k chrm 92 555 47474 47473 F 464 0.00 1338 reject_low 8 ALIGNMENT 0 YS2-3o03.p1k chrm 625 547 4189 4188 C 79 0.00 625 reject_low 20 ALIGNMENT 43 YS2-3o03.p1k chrm 143 37 71157 71257 C 107 84.11 625 reject_low 5 ALIGNMENT 0 YS2-3o03.p1k chrm 62 417 82325 82324 F 356 0.00 625 reject_low 4 ALIGNMENT 38 YS2-3o03.q1k chrm 600 553 84486 84533 C 48 95.83 1338 reject_low 4 ALIGNMENT 0 YS2-3o03.p1k chrm 625 82 47475 47474 C 544 0.00 625 reject_low 19 ALIGNMENT 0 YS2-3o03.p1k chrm 83 625 83097 83096 F 543 0.00 625 reject_low 18 ALIGNMENT 129 YS2-3o03.p1k chrm 356 543 44860 45048 F 188 93.09 625 reject_low 11 ALIGNMENT 0 YS2-3o03.p1k chrm 601 625 82509 82508 F 25 0.00 625 reject_low 4 ALIGNMENT 39 YS2-3o03.p1k chrm 37 82 83052 83097 F 46 97.83 625 reject_low 18 ALIGNMENT 0 YS2-3o03.p1k chrm 547 625 30344 30343 F 79 0.00 625 accept 0 ALIGNMENT 0 YS2-3o03.q1k chrm 556 92 62904 62903 C 465 0.00 1338 reject_low 17 ALIGNMENT 72 YS2-3o03.q1k chrm 219 37 82325 82509 C 183 87.43 1338 reject_low 6 ALIGNMENT 0 YS2-3o03.p1k chrm 124 625 62948 62947 F 502 0.00 625 reject_low 9 ALIGNMENT 0 YS2-3o03.q1k chrm 314 531 56934 57004 F 218 0.00 1338 reject_low 5 ALIGNMENT 105 YS2-3o03.p1k chrm 546 357 4188 4376 C 190 89.47 625 reject_low 20 ALIGNMENT 31 YS2-3o03.q1k chrm 600 555 9030 9075 C 46 93.48 1338 reject_low 10 ALIGNMENT 0 YS2-3o03.p1k chrm 356 85 4377 12264 C 272 0.00 625 reject_low 20 ALIGNMENT 45 YS2-3o03.p1k chrm 37 84 84486 84533 F 48 100.00 625 reject_low 15 ALIGNMENT 81 YS2-3o03.p1k chrm 418 600 82325 82509 F 183 89.62 625 reject_low 4 ALIGNMENT 42 YS2-3o03.p1k chrm 84 37 9486 9533 C 48 97.92 625 reject_low 16 ALIGNMENT 106 YS2-3o03.p1k chrm 606 357 12593 12844 C 250 86.40 625 reject_low 1 ALIGNMENT 389 YS2-3o03.p1k chrm 34 546 29836 30344 F 513 97.66 625 accept 0 ALIGNMENT 0 YS2-3o03.q1k chrm 538 92 10807 10806 C 447 0.00 1338 reject_low 7 ALIGNMENT 658 YS2-3o04.p1k chr02 130 1099 510447 511388 F 970 91.75 1278 accept 0 ALIGNMENT 0 YS2-3o05.p1k chr12 684 702 573361 573360 F 19 0.00 702 accept_chi 0 ALIGNMENT 635 YS2-3o05.p1k chr12 31 683 572709 573361 F 653 99.85 702 accept_chi 0 ALIGNMENT 619 YS2-3o05.q1k chr12 689 35 572709 573361 C 655 99.08 690 accept_chi 1 ALIGNMENT 875 YS2-3o08.q1k chr15 1063 38 918561 919578 C 1026 96.39 1365 accept 0 ALIGNMENT 983 YS2-3o08.p1k chr15 27 1095 914891 915964 F 1069 98.13 1191 accept 0 ALIGNMENT 220 YS2-3o09.q1k vc_7 358 1 2206 2569 C 358 88.55 618 reject_vc 3 ALIGNMENT 0 YS2-3o09.p1k chr02 439 423 36080 36079 C 17 0.00 439 reject_low 10 ALIGNMENT 0 YS2-3o09.p1k chr16 439 423 442971 442970 C 17 0.00 439 reject_low 9 ALIGNMENT 0 YS2-3o09.p1k chr07 423 439 110998 110997 F 17 0.00 439 reject_low 21 ALIGNMENT 0 YS2-3o09.p1k chr10 423 439 197603 197602 F 17 0.00 439 reject_low 13 ALIGNMENT 0 YS2-3o09.p1k chr14 423 439 561747 561746 F 17 0.00 439 reject_low 19 ALIGNMENT 0 YS2-3o09.p1k chr02 282 62 36219 36218 C 221 0.00 439 reject_low 10 ALIGNMENT 0 YS2-3o09.p1k chr15 62 282 703773 703772 F 221 0.00 439 reject_low 23 ALIGNMENT 0 YS2-3o09.p1k chr08 62 282 85535 85534 F 221 0.00 439 reject_low 18 ALIGNMENT 135 YS2-3o09.p1k chr09 422 283 196881 197020 C 140 100.00 439 reject_low 12 ALIGNMENT 132 YS2-3o09.p1k chr08 283 422 85535 85674 F 140 99.29 439 reject_low 18 ALIGNMENT 0 YS2-3o09.p1k chr02 439 423 643715 643714 C 17 0.00 439 reject_low 20 ALIGNMENT 135 YS2-3o09.p1k chr16 422 283 437118 437257 C 140 100.00 439 reject_low 16 ALIGNMENT 75 YS2-3o09.p1k chr05 181 105 250285 250361 C 77 100.00 439 reject_low 7 ALIGNMENT 203 YS2-3o09.q1k vc_1 1 287 2689 2980 F 287 91.64 618 reject_vc 4 ALIGNMENT 0 YS2-3o09.p1k chr09 439 423 196882 196881 C 17 0.00 439 reject_low 12 ALIGNMENT 0 YS2-3o09.p1k chr08 423 439 91526 91525 F 17 0.00 439 reject_low 11 ALIGNMENT 134 YS2-3o09.p1k chr14 422 275 632352 632498 C 148 98.65 439 reject_low 8 ALIGNMENT 0 YS2-3o09.p1k chr04 423 439 437285 437284 F 17 0.00 439 reject_low 24 ALIGNMENT 0 YS2-3o09.p1k chr07 281 62 931545 931544 C 220 0.00 439 reject_low 26 ALIGNMENT 0 YS2-3o09.p1k chr13 282 62 808906 808905 C 221 0.00 439 reject_low 22 ALIGNMENT 0 YS2-3o09.p1k chr14 423 439 96590 96589 F 17 0.00 439 reject_low 25 ALIGNMENT 132 YS2-3o09.p1k chr05 422 283 354587 354726 C 140 99.29 439 reject_low 17 ALIGNMENT 135 YS2-3o09.p1k chr10 283 422 197464 197603 F 140 100.00 439 reject_low 13 ALIGNMENT 226 YS2-3o09.q1k vc_5 1 379 2556 2942 F 379 88.13 618 reject_vc 1 ALIGNMENT 203 YS2-3o09.q1k vc_3 1 287 2689 2980 F 287 91.64 618 reject_vc 6 ALIGNMENT 0 YS2-3o09.p1k chr16 281 62 443111 443110 C 220 0.00 439 reject_low 9 ALIGNMENT 129 YS2-3o09.p1k chr02 422 283 643714 643853 C 140 98.57 439 reject_low 20 ALIGNMENT 0 YS2-3o09.q1k vc_7 53 54 5172 6360 C 0 0.00 618 reject_vc 28 ALIGNMENT 126 YS2-3o09.p1k chr14 283 422 96451 96590 F 140 97.86 439 reject_low 25 ALIGNMENT 135 YS2-3o09.p1k chr10 283 422 203319 203458 F 140 100.00 439 reject_low 14 ALIGNMENT 0 YS2-3o09.p1k chr08 423 439 85674 85673 F 17 0.00 439 reject_low 18 ALIGNMENT 0 YS2-3o09.p1k chr14 62 282 561608 561607 F 221 0.00 439 reject_low 19 ALIGNMENT 0 YS2-3o09.p1k chr13 62 282 503770 503769 F 221 0.00 439 reject_low 15 ALIGNMENT 219 YS2-3o09.q1k vc_4 379 1 5266 5654 C 379 87.60 618 reject_vc 2 ALIGNMENT 0 YS2-3o09.p1k chr08 62 282 91387 91386 F 221 0.00 439 reject_low 11 ALIGNMENT 135 YS2-3o09.p1k chr08 283 422 91387 91526 F 140 100.00 439 reject_low 11 ALIGNMENT 207 YS2-3o09.p1k chr08 283 39 134211 134457 C 245 96.33 439 accept 0 ALIGNMENT 0 YS2-3o09.p1k chr07 62 282 110859 110858 F 221 0.00 439 reject_low 21 ALIGNMENT 203 YS2-3o09.q1k vc_2 1 287 2322 2613 F 287 91.64 618 reject_vc 5 ALIGNMENT 0 YS2-3o09.p1k chr14 274 62 632499 632498 C 213 0.00 439 reject_low 8 ALIGNMENT 0 YS2-3o09.p1k chr07 439 420 931408 931407 C 20 0.00 439 reject_low 26 ALIGNMENT 30 YS2-3o09.q1k vc_4 304 379 1880 1958 F 76 81.58 618 reject_vc 27 ALIGNMENT 126 YS2-3o09.p1k chr04 283 422 437146 437285 F 140 97.86 439 reject_low 24 ALIGNMENT 0 YS2-3o09.p1k chr10 62 282 197464 197463 F 221 0.00 439 reject_low 13 ALIGNMENT 0 YS2-3o09.p1k chr14 62 282 96451 96450 F 221 0.00 439 reject_low 25 ALIGNMENT 0 YS2-3o09.p1k chr05 439 182 250286 250285 C 258 0.00 439 reject_low 7 ALIGNMENT 148 YS2-3o09.q1k vc_7 287 53 4933 5172 C 235 89.36 618|0,1 reject_vc 28 ALIGNMENT 0 YS2-3o09.p1k chr08 439 284 134212 134211 C 156 0.00 439 accept 0 ALIGNMENT 0 YS2-3o09.q1k vc_7 303 288 4696 4932 C 16 0.00 618 reject_vc 28 ALIGNMENT 0 YS2-3o09.p1k chr13 423 439 503909 503908 F 17 0.00 439 reject_low 15 ALIGNMENT 0 YS2-3o09.p1k chr02 282 62 643854 643853 C 221 0.00 439 reject_low 20 ALIGNMENT 0 YS2-3o09.p1k chr04 62 282 437146 437145 F 221 0.00 439 reject_low 24 ALIGNMENT 0 YS2-3o09.p1k chr10 423 439 203458 203457 F 17 0.00 439 reject_low 14 ALIGNMENT 0 YS2-3o09.p1k chr05 439 423 354588 354587 C 17 0.00 439 reject_low 17 ALIGNMENT 0 YS2-3o09.p1k chr15 423 439 703912 703911 F 17 0.00 439 reject_low 23 ALIGNMENT 0 YS2-3o09.p1k chr16 439 423 437119 437118 C 17 0.00 439 reject_low 16 ALIGNMENT 51 YS2-3o09.q1k vc_7 54 3 6360 6411 C 52 100.00 618|1,0 reject_vc 28 ALIGNMENT 135 YS2-3o09.p1k chr13 283 422 503770 503909 F 140 100.00 439 reject_low 15 ALIGNMENT 136 YS2-3o09.p1k chr16 422 282 442970 443110 C 141 100.00 439 reject_low 9 ALIGNMENT 124 YS2-3o09.p1k chr07 419 282 931407 931544 C 138 97.83 439 reject_low 26 ALIGNMENT 0 YS2-3o09.p1k chr13 439 423 808767 808766 C 17 0.00 439 reject_low 22 ALIGNMENT 0 YS2-3o09.p1k chr10 62 282 203319 203318 F 221 0.00 439 reject_low 14 ALIGNMENT 129 YS2-3o09.p1k chr13 422 283 808766 808905 C 140 98.57 439 reject_low 22 ALIGNMENT 30 YS2-3o09.q1k vc_7 379 304 4617 4695 C 76 81.58 618 reject_vc 28 ALIGNMENT 132 YS2-3o09.p1k chr14 283 422 561608 561747 F 140 99.29 439 reject_low 19 ALIGNMENT 0 YS2-3o09.p1k chr05 282 62 354727 354726 C 221 0.00 439 reject_low 17 ALIGNMENT 0 YS2-3o09.p1k chr14 439 423 632353 632352 C 17 0.00 439 reject_low 8 ALIGNMENT 0 YS2-3o09.p1k chr16 282 62 437258 437257 C 221 0.00 439 reject_low 16 ALIGNMENT 129 YS2-3o09.p1k chr07 283 422 110859 110998 F 140 98.57 439 reject_low 21 ALIGNMENT 0 YS2-3o09.p1k chr05 104 62 250362 250361 C 43 0.00 439 reject_low 7 ALIGNMENT 0 YS2-3o09.p1k chr09 282 62 197021 197020 C 221 0.00 439 reject_low 12 ALIGNMENT 135 YS2-3o09.p1k chr02 422 283 36079 36218 C 140 100.00 439 reject_low 10 ALIGNMENT 129 YS2-3o09.p1k chr15 283 422 703773 703912 F 140 98.57 439 reject_low 23 ALIGNMENT 594 YS2-3o10.q1k chr07 799 5 143921 144706 C 795 93.21 1293 accept 0 ALIGNMENT 675 YS2-3o10.p1k chr07 27 954 139561 140498 F 928 91.70 1082 accept 0 ALIGNMENT 646 YS2-3o11.p1k chr07 816 1 204689 205516 C 816 95.59 816 accept 0 ALIGNMENT 829 YS2-3o11.q1k chr07 33 1058 199800 200828 F 1026 94.74 1272 accept 0 ALIGNMENT 395 YS2-3o13.q1k chr12 29 605 50709 51281 F 577 90.64 1277 accept 0 ALIGNMENT 624 YS2-3o13.p1k chr12 996 36 53664 54608 C 961 89.49 1139 accept 0 ALIGNMENT 829 YS2-3o15.p1k chr06 1086 53 259164 260185 C 1034 94.87 1109 accept 0 ALIGNMENT 841 YS2-3o15.q1k chr06 35 1070 255507 256536 F 1036 94.59 1311 accept 0 ALIGNMENT 389 YS2-3o17.p1k chr12 674 159 453175 453679 C 516 93.60 1122 reject_low 2 ALIGNMENT 938 YS2-3o17.q1k chr12 26 1145 466131 467239 F 1120 95.62 1234 reject_low 1 ALIGNMENT 389 YS2-3o17.p1k chr12 674 159 462312 462816 C 516 93.60 1122 accept 0 ALIGNMENT 938 YS2-3o17.q1k chr12 26 1145 456994 458102 F 1120 95.62 1234 accept 0 ALIGNMENT 966 YS2-3o18.p1k chr04 28 1143 27218 28337 F 1116 97.40 1153 accept 0 ALIGNMENT 948 YS2-3o18.q1k chr04 1142 30 31118 32220 C 1113 96.50 1304 accept 0 ALIGNMENT 198 YS2-3o20.p1k chr03 33 234 239187 239388 F 202 99.50 255 accept 0 ALIGNMENT 0 YS2-3o20.p1k chr03 235 255 239388 239387 F 21 0.00 255 accept 0 ALIGNMENT 841 YS2-3o21.q1k chr12 26 1046 1033879 1034887 F 1021 95.69 1195 accept 0 ALIGNMENT 231 YS2-3o21.p1k chr12 616 233 1038731 1039125 C 384 89.06 1003 accept 0 ALIGNMENT 861 YS2-3o22.q1k chr12 31 989 464793 465741 F 959 97.39 1296 accept 1 ALIGNMENT 94 YS2-3o22.p1k chr06 257 364 31622 31729 F 108 98.15 1108 reject_low 2 ALIGNMENT 549 YS2-3o22.p1k chr12 840 113 467971 468695 C 728 92.99 1108 accept 1 ALIGNMENT 0 YS2-3o22.p1k chr06 137 256 31622 31621 F 120 0.00 1108 reject_low 2 ALIGNMENT 861 YS2-3o22.q1k chr12 31 989 455656 456604 F 959 97.39 1296 accept 0 ALIGNMENT 0 YS2-3o22.p1k chr06 365 526 31729 31728 F 162 0.00 1108 reject_low 2 ALIGNMENT 549 YS2-3o22.p1k chr12 840 113 458834 459558 C 728 92.99 1108 accept 0 ALIGNMENT 823 YS2-3o23.p1k chr04 1016 43 50249 51231 C 974 96.92 1016 accept 0 ALIGNMENT 808 YS2-3o23.q1k chr04 28 927 46378 47274 F 900 97.67 1159 accept 0 ALIGNMENT 177 YS2-3o24.p1k chr12 33 225 468319 468512 F 193 98.96 244 accept 1 ALIGNMENT 0 YS2-3o24.p1k chr12 226 244 468512 468511 F 19 0.00 244 accept 1 ALIGNMENT 177 YS2-3o24.p1k chr12 33 225 459182 459375 F 193 98.96 244 accept 0 ALIGNMENT 0 YS2-3o24.p1k chr06 244 226 31663 31662 C 19 0.00 244 reject_low 2 ALIGNMENT 0 YS2-3o24.p1k chr12 226 244 459375 459374 F 19 0.00 244 accept 0 ALIGNMENT 0 YS2-3o24.p1k chr06 157 62 31730 31729 C 96 0.00 244 reject_low 2 ALIGNMENT 57 YS2-3o24.p1k chr06 225 158 31662 31729 C 68 97.06 244 reject_low 2 ALIGNMENT 800 YS2-3p01.q1k chr16 1017 24 903629 904611 C 994 94.87 1392 accept 0 ALIGNMENT 949 YS2-3p01.p1k chr16 31 1109 900492 901576 F 1079 96.29 1109 accept 0 ALIGNMENT 887 YS2-3p03.q1k chr04 26 1009 399422 400399 F 984 97.46 1296 accept 0 ALIGNMENT 292 YS2-3p03.p1k chr04 655 119 403771 404320 C 537 87.71 1095 accept 0 ALIGNMENT 816 YS2-3p07.q1k chr07 31 962 1031317 1032245 F 932 97.75 1420 accept 0 ALIGNMENT 0 YS2-3p08.p1k chrm 148 631 10435 10434 F 484 0.00 1220 reject_low 4 ALIGNMENT 40 YS2-3p08.p1k chrm 147 96 52331 52383 C 52 94.23 1220 reject_low 9 ALIGNMENT 647 YS2-3p08.p1k chrm 943 33 46676 47589 C 911 96.16 1220 accept 0 ALIGNMENT 0 YS2-3p08.p1k chrm 95 62 12320 12319 C 34 0.00 1220 reject_low 8 ALIGNMENT 33 YS2-3p08.p1k chrm 53 147 10343 10435 F 95 81.05 1220 reject_low 4 ALIGNMENT 0 YS2-3p08.p1k chrm 147 631 3101 3100 F 485 0.00 1220 reject_low 10 ALIGNMENT 0 YS2-3p08.p1k chrm 148 631 9074 9073 F 484 0.00 1220 reject_low 2 ALIGNMENT 37 YS2-3p08.p1k chrm 103 148 10744 10789 F 46 95.65 1220 reject_low 11 ALIGNMENT 0 YS2-3p08.p1k chrm 62 98 83048 83047 F 37 0.00 1220 reject_low 6 ALIGNMENT 52 YS2-3p08.p1k chrm 91 183 8223 8313 F 93 88.17 1220 reject_low 1 ALIGNMENT 0 YS2-3p08.p1k chrm 62 90 8223 8222 F 29 0.00 1220 reject_low 1 ALIGNMENT 0 YS2-3p08.p1k chrm 631 148 12269 12268 C 484 0.00 1220 reject_low 8 ALIGNMENT 0 YS2-3p08.p1k chrm 148 631 83096 83095 F 484 0.00 1220 reject_low 6 ALIGNMENT 0 YS2-3p08.p1k chrm 62 95 3050 3049 F 34 0.00 1220 reject_low 10 ALIGNMENT 0 YS2-3p08.p1k chrm 148 631 11548 11547 F 484 0.00 1220 reject_low 3 ALIGNMENT 51 YS2-3p08.p1k chrm 72 147 11475 11548 F 76 90.79 1220 reject_low 3 ALIGNMENT 39 YS2-3p08.p1k chrm 96 146 3050 3101 F 51 94.12 1220 reject_low 10 ALIGNMENT 0 YS2-3p08.p1k chrm 95 62 52384 52383 C 34 0.00 1220 reject_low 9 ALIGNMENT 0 YS2-3p08.p1k chrm 143 631 11084 11083 F 489 0.00 1220 reject_low 7 ALIGNMENT 44 YS2-3p08.p1k chrm 99 147 83048 83096 F 49 97.96 1220 reject_low 6 ALIGNMENT 0 YS2-3p08.p1k chrm 184 631 8313 8312 F 448 0.00 1220 reject_low 1 ALIGNMENT 0 YS2-3p08.p1k chrm 149 631 10789 10788 F 483 0.00 1220 reject_low 11 ALIGNMENT 0 YS2-3p08.p1k chrm 631 148 52332 52331 C 484 0.00 1220 reject_low 9 ALIGNMENT 50 YS2-3p08.p1k chrm 48 147 8977 9074 F 100 87.00 1220 reject_low 2 ALIGNMENT 42 YS2-3p08.p1k chrm 97 142 11039 11084 F 46 97.83 1220 reject_low 7 ALIGNMENT 42 YS2-3p08.p1k chrm 69 146 65740 65813 F 78 87.18 1220 reject_low 5 ALIGNMENT 0 YS2-3p08.p1k chrm 62 96 11039 11038 F 35 0.00 1220 reject_low 7 ALIGNMENT 41 YS2-3p08.p1k chrm 147 96 12268 12319 C 52 94.23 1220 reject_low 8 ALIGNMENT 0 YS2-3p08.p1k chrm 62 102 10744 10743 F 41 0.00 1220 reject_low 11 ALIGNMENT 0 YS2-3p08.p1k chrm 147 631 65813 65812 F 485 0.00 1220 reject_low 5 ALIGNMENT 825 YS2-3p09.q1k chr13 1039 29 46033 47028 C 1011 95.55 1342 accept 0 ALIGNMENT 682 YS2-3p09.p1k chr13 64 944 42395 43269 F 881 93.64 1091 accept 0 ALIGNMENT 622 YS2-3p10.p1k chr12 957 84 235709 236577 C 874 90.73 1064 accept 0 ALIGNMENT 624 YS2-3p10.q1k chr12 5 703 231984 232677 F 699 97.71 1341 accept 0 ALIGNMENT 0 YS2-3p10.q1k chr12 402 62 412425 412424 C 341 0.00 1341 reject_low 1 ALIGNMENT 137 YS2-3p10.q1k chr12 703 403 412129 412424 C 301 83.39 1341 reject_low 1 ALIGNMENT 235 YS2-3p11.q1k chr12 44 904 199971 200830 F 861 76.42 1221 reject_low 1 ALIGNMENT 629 YS2-3p11.p1k chr13 961 54 511685 512603 C 908 90.75 1053 accept 0 ALIGNMENT 865 YS2-3p11.q1k chr13 33 1034 507923 508922 F 1002 96.11 1221 accept 0 ALIGNMENT 811 YS2-3p14.q1k chr15 27 1057 126963 127986 F 1031 94.57 1363 accept 0 ALIGNMENT 459 YS2-3p14.p1k chr15 739 108 130342 130987 C 632 91.14 966 accept 0 ALIGNMENT 65 YS2-3p15.q1k vc_4 304 238 6273 6339 C 67 100.00 1076 reject_low 9 ALIGNMENT 302 YS2-3p15.q1k vc_1 1 303 2689 2991 F 303 100.00 1076 reject_low 4 ALIGNMENT 115 YS2-3p15.q1k vc_7 421 305 4583 4699 C 117 100.00 1076 reject_low 7 ALIGNMENT 0 YS2-3p15.q1k vc_7 464 422 4584 4583 C 43 0.00 1076 reject_low 7 ALIGNMENT 0 YS2-3p15.q1k vc_7 53 54 5172 6360 C 0 0.00 1076 reject_low 7 ALIGNMENT 302 YS2-3p15.q1k vc_3 1 303 2689 2991 F 303 100.00 1076 reject_low 6 ALIGNMENT 0 YS2-3p15.q1k vc_4 464 305 47 46 C 160 0.00 1076 reject_low 8 ALIGNMENT 712 YS2-3p15.q1k vc_7 894 1 1681 2569 C 894 93.74 1076 reject_low 1 ALIGNMENT 0 YS2-3p15.q1k vc_4 237 62 6340 6339 C 176 0.00 1076 reject_low 9 ALIGNMENT 413 YS2-3p15.q1k vc_4 421 1 5232 5654 C 421 99.52 1076 reject_low 3 ALIGNMENT 302 YS2-3p15.q1k vc_2 1 303 2322 2624 F 303 100.00 1076 reject_low 5 ALIGNMENT 0 YS2-3p15.q1k vc_4 62 237 1548 1547 F 176 0.00 1076 reject_low 2 ALIGNMENT 247 YS2-3p15.q1k vc_7 303 53 4922 5172 C 251 99.60 1076|0,1 reject_low 7 ALIGNMENT 405 YS2-3p15.q1k vc_4 308 974 1879 2543 F 667 87.86 1076 reject_low 2 ALIGNMENT 0 YS2-3p15.q1k vc_1 304 464 2991 2990 F 161 0.00 1076 reject_low 4 ALIGNMENT 717 YS2-3p15.q1k vc_5 1 974 2556 3527 F 974 91.79 1076 reject_vc 0 ALIGNMENT 51 YS2-3p15.q1k vc_7 54 3 6360 6411 C 52 100.00 1076|1,0 reject_low 7 ALIGNMENT 65 YS2-3p15.q1k vc_4 304 238 46 112 C 67 100.00 1076 reject_low 8 ALIGNMENT 0 YS2-3p15.q1k vc_7 304 304 4700 4921 C 1 0.00 1076 reject_low 7 ALIGNMENT 0 YS2-3p15.q1k vc_4 464 305 6274 6273 C 160 0.00 1076 reject_low 9 ALIGNMENT 0 YS2-3p15.q1k vc_4 305 307 1615 1878 F 3 0.00 1076 reject_low 2 ALIGNMENT 0 YS2-3p15.q1k vc_4 464 422 5233 5232 C 43 0.00 1076 reject_low 3 ALIGNMENT 65 YS2-3p15.q1k vc_4 238 304 1548 1614 F 67 100.00 1076 reject_low 2 ALIGNMENT 0 YS2-3p15.q1k vc_3 304 464 2991 2990 F 161 0.00 1076 reject_low 6 ALIGNMENT 0 YS2-3p15.q1k vc_2 304 464 2624 2623 F 161 0.00 1076 reject_low 5 ALIGNMENT 0 YS2-3p15.q1k vc_4 237 62 113 112 C 176 0.00 1076 reject_low 8 ALIGNMENT 869 YS2-3p16.p1k chr04 27 1148 917486 918597 F 1122 93.76 1182 accept 0 ALIGNMENT 902 YS2-3p16.q1k chr04 1161 22 919120 920263 C 1140 94.82 1347 accept 0 ALIGNMENT 750 YS2-3p17.p1k chr14 101 1074 2644 3617 F 974 92.71 1144 reject_low 12 ALIGNMENT 759 YS2-3p17.p1k chr08 1121 105 558750 559764 C 1017 92.33 1144 reject_low 7 ALIGNMENT 753 YS2-3p17.p1k chr15 1074 105 1087610 1088578 C 970 93.20 1144 reject_low 11 ALIGNMENT 747 YS2-3p17.p1k chr12 1074 105 1067983 1068951 C 970 92.99 1144 reject_low 17 ALIGNMENT 734 YS2-3p17.p1k chr10 95 1074 3008 3988 F 980 91.94 1144 reject_low 18 ALIGNMENT 762 YS2-3p17.p1k chr13 101 1121 2737 3756 F 1021 92.07 1144 reject_low 5 ALIGNMENT 759 YS2-3p17.p1k chr02 101 1121 3062 4081 F 1021 91.87 1144 reject_low 6 ALIGNMENT 753 YS2-3p17.p1k chr12 1074 105 1074646 1075614 C 970 93.20 1144 reject_low 10 ALIGNMENT 750 YS2-3p17.p1k chr07 1074 105 1087351 1088319 C 970 93.09 1144 reject_low 15 ALIGNMENT 750 YS2-3p17.p1k chr05 1074 105 573274 574242 C 970 93.09 1144 reject_low 14 ALIGNMENT 746 YS2-3p17.p1k chr05 95 1074 2701 3681 F 980 92.24 1144 reject_low 8 ALIGNMENT 765 YS2-3p17.p1k chr16 1121 105 944297 945311 C 1017 92.53 1144 accept 0 ALIGNMENT 753 YS2-3p17.p1k chr04 1074 105 1528445 1529413 C 970 93.20 1144 reject_low 9 ALIGNMENT 768 YS2-3p17.p1k chr12 101 1121 8396 9415 F 1021 92.16 1144 reject_low 3 ALIGNMENT 737 YS2-3p17.p1k chr09 95 1074 3025 4005 F 980 92.04 1144 reject_low 16 ALIGNMENT 758 YS2-3p17.p1k chr08 95 1121 2586 3612 F 1027 91.72 1144 reject_low 1 ALIGNMENT 768 YS2-3p17.p1k chr12 101 1121 2861 3880 F 1021 92.16 1144 reject_low 2 ALIGNMENT 834 YS2-3p17.q1k chr16 29 1041 940762 941762 F 1013 95.95 1288 accept 0 ALIGNMENT 765 YS2-3p17.p1k chr06 101 1121 1898 2917 F 1021 92.07 1144 reject_low 4 ALIGNMENT 750 YS2-3p17.p1k chr16 101 1074 2553 3526 F 974 92.71 1144 reject_low 13 ALIGNMENT 809 YS2-3p18.q1k chr12 25 969 450265 451197 F 945 97.46 1430 accept 0 ALIGNMENT 764 YS2-3p19.p1k chr16 870 66 749121 749927 C 805 99.13 889 accept_chi 0 ALIGNMENT 729 YS2-3p19.q1k chr16 27 829 749122 749927 F 803 97.88 1271 accept_chi 1 ALIGNMENT 0 YS2-3p20.p1k chr05 62 309 175243 175242 F 248 0.00 1140 reject_low 1 ALIGNMENT 0 YS2-3p20.p1k chr15 791 62 346586 346585 C 730 0.00 1140 reject_low 5 ALIGNMENT 38 YS2-3p20.p1k chr15 747 678 346402 346471 C 70 88.57 1140 reject_low 4 ALIGNMENT 0 YS2-3p20.p1k chr15 677 62 346472 346471 C 616 0.00 1140 reject_low 4 ALIGNMENT 892 YS2-3p20.p1k chr15 985 39 346278 347224 C 947 98.63 1140 accept 0 ALIGNMENT 190 YS2-3p20.p1k chr05 310 606 175243 175539 F 297 88.55 1140 reject_low 1 ALIGNMENT 57 YS2-3p20.p1k chr15 849 690 346381 346540 C 160 81.25 1140 reject_low 2 ALIGNMENT 0 YS2-3p20.p1k chr15 864 850 346382 346381 C 15 0.00 1140 reject_low 2 ALIGNMENT 0 YS2-3p20.p1k chr15 864 748 346403 346402 C 117 0.00 1140 reject_low 4 ALIGNMENT 798 YS2-3p20.q1k chr15 29 1005 342554 343528 F 977 94.98 1274 accept 0 ALIGNMENT 0 YS2-3p20.p1k chr05 607 864 175539 175538 F 258 0.00 1140 reject_low 1 ALIGNMENT 0 YS2-3p20.p1k chr15 689 62 346541 346540 C 628 0.00 1140 reject_low 2 ALIGNMENT 52 YS2-3p20.p1k chr15 858 723 346438 346573 C 136 82.35 1140 reject_low 3 ALIGNMENT 37 YS2-3p20.p1k chr15 861 792 346516 346585 C 70 88.57 1140 reject_low 5 ALIGNMENT 0 YS2-3p20.p1k chr15 722 62 346574 346573 C 661 0.00 1140 reject_low 3 ALIGNMENT 42 YS2-3p21.q1k vc_4 561 602 5830 5871 F 42 100.00 602 reject_low 4 ALIGNMENT 0 YS2-3p21.q1k vc_4 92 560 5830 5829 F 469 0.00 602 reject_low 4 ALIGNMENT 0 YS2-3p21.q1k vc_1 560 92 2514 2513 C 469 0.00 602 reject_low 2 ALIGNMENT 384 YS2-3p21.p1k chr12 550 29 460045 460591 C 522 93.10 569 accept 0 ALIGNMENT 0 YS2-3p21.q1k vc_7 92 564 13525 13524 F 473 0.00 602 reject_low 6 ALIGNMENT 0 YS2-3p21.q1k chr12 562 602 460589 460588 F 41 0.00 602 reject_low 1 ALIGNMENT 36 YS2-3p21.q1k vc_5 599 564 1 36 C 36 100.00 602 reject_low 7 ALIGNMENT 39 YS2-3p21.q1k vc_5 602 564 5025 5063 C 39 100.00 602 reject_low 5 ALIGNMENT 0 YS2-3p21.p1k chr12 569 551 460046 460045 C 19 0.00 569 accept 0 ALIGNMENT 0 YS2-3p21.q1k vc_5 563 92 5064 5063 C 472 0.00 602 reject_low 5 ALIGNMENT 0 YS2-3p21.q1k vc_5 563 92 37 36 C 472 0.00 602 reject_low 7 ALIGNMENT 42 YS2-3p21.q1k vc_3 602 561 2472 2513 C 42 100.00 602 reject_low 3 ALIGNMENT 0 YS2-3p21.q1k chr12 562 602 451452 451451 F 41 0.00 602 accept 0 ALIGNMENT 34 YS2-3p21.q1k chr12 528 561 451419 451452 F 34 100.00 602 accept 0 ALIGNMENT 0 YS2-3p21.q1k chr12 92 527 451419 451418 F 436 0.00 602 accept 0 ALIGNMENT 0 YS2-3p21.q1k vc_3 560 92 2514 2513 C 469 0.00 602 reject_low 3 ALIGNMENT 42 YS2-3p21.q1k vc_1 602 561 2472 2513 C 42 100.00 602 reject_low 2 ALIGNMENT 38 YS2-3p21.q1k vc_7 565 602 13525 13562 F 38 100.00 602 reject_low 6 ALIGNMENT 358 YS2-3p21.q1k chr12 33 561 460045 460589 F 529 92.06 602 reject_low 1 ALIGNMENT 234 YS2-3p24.q1k chr03 103 435 80620 80944 F 333 93.09 1534 accept 0 ALIGNMENT 998 YS2-4a01.p1k chr12 1123 34 465256 466361 C 1090 97.80 1293 accept 1 ALIGNMENT 461 YS2-4a01.q1k chr12 6 593 463343 463926 F 588 93.54 1302 accept 1 ALIGNMENT 998 YS2-4a01.p1k chr12 1123 34 456119 457224 C 1090 97.80 1293 accept 0 ALIGNMENT 461 YS2-4a01.q1k chr12 6 593 454206 454789 F 588 93.54 1302 accept 0 ALIGNMENT 1016 YS2-4a02.p1k chr11 32 1168 211273 212410 F 1137 97.36 1400 accept 0 ALIGNMENT 531 YS2-4a02.q1k chr11 706 32 212054 212723 C 675 94.96 1485 accept 0 ALIGNMENT 0 YS2-4a04.q1k chr12 598 471 1057330 1057329 C 128 0.00 1429 reject_low 1 ALIGNMENT 291 YS2-4a04.q1k chr04 871 468 247131 247531 C 404 92.33 1429 accept 0 ALIGNMENT 422 YS2-4a04.q1k chr12 470 26 1057329 1057771 C 445 99.33 1429 reject_low 1 ALIGNMENT 0 YS2-4a04.q1k chr04 467 62 247532 247531 C 406 0.00 1429 accept 0 ALIGNMENT 929 YS2-4a04.p1k chr04 32 1092 242343 243423 F 1061 97.64 1352 accept 0 ALIGNMENT 1014 YS2-4a05.p1k chr14 33 1213 510840 512035 F 1181 96.53 1391 accept 0 ALIGNMENT 353 YS2-4a05.q1k chr14 537 14 512090 512607 C 524 91.03 1285 accept 0 ALIGNMENT 1035 YS2-4a06.p1k chr15 1157 33 929892 931022 C 1125 98.49 1450 accept 0 ALIGNMENT 260 YS2-4a07.q1k chr13 775 44 358060 358788 C 732 80.33 1489 ambiguous_trans 26 ALIGNMENT 361 YS2-4a07.q1k chr05 775 52 493553 494273 C 724 84.94 1489 ambiguous_trans 20 ALIGNMENT 368 YS2-4a07.q1k chr05 775 44 444454 445182 C 732 85.11 1489 ambiguous_trans 19 ALIGNMENT 369 YS2-4a07.q1k chr13 44 775 200466 201194 F 732 85.11 1489 ambiguous_trans 18 ALIGNMENT 581 YS2-4a07.q1k chr04 35 806 985331 986098 F 772 93.65 1489 ambiguous_trans 8 ALIGNMENT 393 YS2-4a07.q1k chr14 44 775 523277 524005 F 732 86.20 1489 ambiguous_trans 16 ALIGNMENT 566 YS2-4a07.q1k chr02 35 806 33807 34574 F 772 93.01 1489 ambiguous_trans 10 ALIGNMENT 593 YS2-4a07.q1k chr12 35 775 945355 946091 F 741 95.14 1489 ambiguous_trans 11 ALIGNMENT 587 YS2-4a07.q1k chr14 806 35 563059 563826 C 772 93.91 1489 ambiguous_trans 7 ALIGNMENT 386 YS2-4a07.q1k chr04 806 44 879325 880084 C 763 85.32 1489 ambiguous_trans 15 ALIGNMENT 351 YS2-4a07.q1k chr16 775 82 851687 852378 C 694 85.16 1489 ambiguous_trans 25 ALIGNMENT 593 YS2-4a07.q1k chr06 35 806 142074 142841 F 772 94.17 1489 ambiguous_trans 4 ALIGNMENT 386 YS2-4a07.q1k chr01 775 44 161300 162028 C 732 85.93 1489 ambiguous_trans 17 ALIGNMENT 361 YS2-4a07.q1k chr13 775 52 373758 374478 C 724 84.94 1489 ambiguous_trans 21 ALIGNMENT 578 YS2-4a07.q1k chr04 775 35 514741 515477 C 741 94.47 1489 ambiguous_trans 13 ALIGNMENT 581 YS2-4a07.q1k chr12 775 35 976794 977530 C 741 94.60 1489 ambiguous_trans 12 ALIGNMENT 353 YS2-4a07.q1k chr16 775 44 805699 806427 C 732 84.43 1489 ambiguous_trans 24 ALIGNMENT 1025 YS2-4a07.p1k chr10 1270 31 116986 118237 C 1240 95.16 1389 accept 0 ALIGNMENT 593 YS2-4a07.q1k chr07 806 35 569770 570537 C 772 94.17 1489 ambiguous_trans 5 ALIGNMENT 593 YS2-4a07.q1k chr04 35 806 875982 876749 F 772 94.17 1489 ambiguous_trans 3 ALIGNMENT 593 YS2-4a07.q1k chr07 35 806 815618 816385 F 772 94.17 1489 ambiguous_trans 6 ALIGNMENT 581 YS2-4a07.q1k chr15 35 806 974448 975215 F 772 93.65 1489 ambiguous_trans 9 ALIGNMENT 602 YS2-4a07.q1k chr15 806 35 705090 705857 C 772 94.56 1489 ambiguous_trans 1 ALIGNMENT 357 YS2-4a07.q1k chr16 44 775 848546 849274 F 732 84.56 1489 ambiguous_trans 23 ALIGNMENT 593 YS2-4a07.q1k chr03 35 806 88976 89743 F 772 94.17 1489 ambiguous_trans 2 ALIGNMENT 395 YS2-4a07.q1k chr04 806 44 646524 647283 C 763 85.71 1489 ambiguous_trans 14 ALIGNMENT 357 YS2-4a07.q1k chr13 44 775 188299 189027 F 732 84.56 1489 ambiguous_trans 22 ALIGNMENT 148 YS2-4a08.q1k vc_7 300 54 4932 5172 C 247 88.66 1198 reject_low 6 ALIGNMENT 196 YS2-4a08.q1k vc_5 2 300 2556 2848 F 299 90.30 1198 reject_vc 3 ALIGNMENT 196 YS2-4a08.q1k vc_7 300 2 2277 2569 C 299 90.30 1198 reject_vc 4 ALIGNMENT 196 YS2-4a08.q1k vc_2 2 300 2322 2614 F 299 90.30 1198 reject_vc 1 ALIGNMENT 189 YS2-4a08.q1k vc_4 300 2 5360 5654 C 299 89.63 1198 reject_vc 5 ALIGNMENT 196 YS2-4a08.q1k vc_3 2 300 2689 2981 F 299 90.30 1198 reject_vc 2 ALIGNMENT 196 YS2-4a08.q1k vc_1 2 300 2689 2981 F 299 90.30 1198 reject_vc 0 ALIGNMENT 0 YS2-4a09.p1k chr16 499 867 437846 437845 F 369 0.00 1360 reject_low 3 ALIGNMENT 0 YS2-4a09.p1k chr10 867 499 202731 202730 C 369 0.00 1360 reject_low 1 ALIGNMENT 327 YS2-4a09.q1k chr02 548 16 425300 425830 C 533 87.99 1365 accept 0 ALIGNMENT 432 YS2-4a09.p1k chr10 498 34 202730 203195 C 465 99.78 1360 reject_low 1 ALIGNMENT 429 YS2-4a09.p1k chr16 34 498 437381 437846 F 465 99.57 1360 reject_low 3 ALIGNMENT 0 YS2-4a09.p1k chr08 867 499 90799 90798 C 369 0.00 1360 reject_low 2 ALIGNMENT 429 YS2-4a09.p1k chr08 498 34 90798 91263 C 465 99.57 1360 reject_low 2 ALIGNMENT 0 YS2-4a09.p1k chr02 62 497 420222 420221 F 436 0.00 1360 accept 0 ALIGNMENT 555 YS2-4a09.p1k chr02 498 1233 420222 420968 F 736 93.07 1360 accept 0 ALIGNMENT 497 YS2-4a10.p1k scplasm1 31 775 2210 2955 F 745 89.53 1412 accept 0 ALIGNMENT 486 YS2-4a10.q1k vc_6 620 34 5412 5997 C 587 95.91 1387 reject_low 1 ALIGNMENT 486 YS2-4a10.q1k scplasm1 620 34 5719 6304 C 587 95.91 1387 accept 0 ALIGNMENT 0 YS2-4a10.p1k scplasm1 776 878 2955 2954 F 103 0.00 1412 accept 0 ALIGNMENT 344 YS2-4a11.q1k chr06 18 511 35448 35939 F 494 91.09 1328 accept 0 ALIGNMENT 1028 YS2-4a11.p1k chr06 1246 31 38825 40052 C 1216 96.05 1341 accept 0 ALIGNMENT 0 YS2-4a12.p1k chr12 62 252 975970 975969 F 191 0.00 1310 reject_low 3 ALIGNMENT 0 YS2-4a12.p1k chr06 62 254 137474 137473 F 193 0.00 1310 reject_low 8 ALIGNMENT 0 YS2-4a12.p1k chr15 244 62 487531 487530 C 183 0.00 1310 reject_low 1 ALIGNMENT 0 YS2-4a12.p1k chr06 336 856 137554 137553 F 521 0.00 1310 reject_low 8 ALIGNMENT 81 YS2-4a12.p1k chr14 336 253 102715 102798 C 84 98.81 1310 reject_low 4 ALIGNMENT 0 YS2-4a12.p1k chr14 856 336 632602 632601 C 521 0.00 1310 reject_low 7 ALIGNMENT 0 YS2-4a12.p1k chr14 253 62 632683 632682 C 192 0.00 1310 reject_low 7 ALIGNMENT 0 YS2-4a12.p1k chr12 337 856 976053 976052 F 520 0.00 1310 reject_low 3 ALIGNMENT 77 YS2-4a12.p1k chr03 335 253 127713 127795 C 83 97.59 1310 reject_low 6 ALIGNMENT 76 YS2-4a12.p1k chr14 335 254 632601 632682 C 82 97.56 1310 reject_low 7 ALIGNMENT 0 YS2-4a12.p1k chr14 252 62 102799 102798 C 191 0.00 1310 reject_low 4 ALIGNMENT 0 YS2-4a12.p1k chr15 252 62 228411 228410 C 191 0.00 1310 reject_low 2 ALIGNMENT 0 YS2-4a12.p1k chr16 856 336 810673 810672 C 521 0.00 1310 reject_low 5 ALIGNMENT 0 YS2-4a12.p1k chr14 856 337 102716 102715 C 520 0.00 1310 reject_low 4 ALIGNMENT 82 YS2-4a12.p1k chr15 339 253 228325 228410 C 87 98.85 1310 reject_low 2 ALIGNMENT 75 YS2-4a12.p1k chr06 255 335 137474 137554 F 81 97.53 1310 reject_low 8 ALIGNMENT 0 YS2-4a12.p1k chr03 856 336 127714 127713 C 521 0.00 1310 reject_low 6 ALIGNMENT 891 YS2-4a12.p1k chr11 1131 38 73819 74925 C 1094 95.43 1310 accept 0 ALIGNMENT 81 YS2-4a12.p1k chr12 253 336 975970 976053 F 84 98.81 1310 reject_low 3 ALIGNMENT 0 YS2-4a12.p1k chr15 856 339 487438 487437 C 518 0.00 1310 reject_low 1 ALIGNMENT 81 YS2-4a12.p1k chr15 338 245 487437 487530 C 94 95.74 1310 reject_low 1 ALIGNMENT 665 YS2-4a12.q1k chr11 30 779 68717 69466 F 750 96.53 1425 accept 0 ALIGNMENT 75 YS2-4a12.p1k chr16 335 249 810672 810756 C 87 96.55 1310 reject_low 5 ALIGNMENT 0 YS2-4a12.p1k chr15 856 340 228326 228325 C 517 0.00 1310 reject_low 2 ALIGNMENT 0 YS2-4a12.p1k chr07 856 337 731142 731141 C 520 0.00 1310 reject_low 9 ALIGNMENT 0 YS2-4a12.p1k chr07 261 62 731216 731215 C 200 0.00 1310 reject_low 9 ALIGNMENT 0 YS2-4a12.p1k chr03 252 62 127796 127795 C 191 0.00 1310 reject_low 6 ALIGNMENT 75 YS2-4a12.p1k chr07 336 262 731141 731215 C 75 100.00 1310 reject_low 9 ALIGNMENT 0 YS2-4a12.p1k chr16 248 62 810757 810756 C 187 0.00 1310 reject_low 5 ALIGNMENT 0 YS2-4a13.p1k chr02 348 330 639178 639177 C 19 0.00 348 accept_chi 0 ALIGNMENT 279 YS2-4a13.p1k chr02 329 32 639177 639474 C 298 98.66 348 accept_chi 0 ALIGNMENT 220 YS2-4a13.q1k chr02 17 270 639224 639477 F 254 96.46 1313 accept_chi 1 ALIGNMENT 977 YS2-4a14.p1k chr02 38 1166 756994 758137 F 1129 97.08 1375 accept 0 ALIGNMENT 427 YS2-4a14.q1k chr02 673 34 761245 761869 C 640 91.09 1407 accept 0 ALIGNMENT 1042 YS2-4a18.p1k chr16 1232 30 38948 40166 C 1203 96.76 1342 accept 0 ALIGNMENT 576 YS2-4a18.q1k chr16 39 740 38942 39638 F 702 95.44 1564 accept 0 ALIGNMENT 0 YS2-4a19.p1k chr12 397 380 773600 773599 C 18 0.00 397 accept 0 ALIGNMENT 309 YS2-4a19.p1k chr12 379 46 773599 773933 C 334 98.50 397 accept 0 ALIGNMENT 0 YS2-4a20.p1k chr02 92 91 28214 28294 F 0 0.00 1350 accept 0 ALIGNMENT 990 YS2-4a20.p1k chr02 88 1192 28291 29399 F 1105 97.65 1350|4,0 accept 0 ALIGNMENT 520 YS2-4a20.q1k chr02 748 60 28955 29640 C 689 92.89 1378 accept 0 ALIGNMENT 60 YS2-4a20.p1k chr02 33 94 28155 28216 F 62 100.00 1350|0,3 accept 0 ALIGNMENT 1093 YS2-4a21.p1k chr15 32 1255 925115 926340 F 1224 97.14 1265 accept 0 ALIGNMENT 689 YS2-4a21.q1k chr15 820 23 925768 926561 C 798 96.24 1263 accept 0 ALIGNMENT 514 YS2-4a22.q1k chr12 35 719 709483 710161 F 685 93.14 1387 accept 0 ALIGNMENT 1086 YS2-4a22.p1k chr12 1273 28 713181 714432 C 1246 96.47 1317 accept 0 ALIGNMENT 36 YS2-4a23.q1k vc_5 588 553 1 36 C 36 100.00 1385 reject_low 14 ALIGNMENT 0 YS2-4a23.q1k vc_3 317 590 2531 2530 F 274 0.00 1385 reject_low 3 ALIGNMENT 95 YS2-4a23.q1k vc_3 591 830 2531 2765 F 240 82.08 1385 reject_low 3 ALIGNMENT 445 YS2-4a23.p1k chr14 502 29 464656 465127 C 474 99.16 516 accept_chi 0 ALIGNMENT 0 YS2-4a23.q1k vc_5 552 317 5064 5063 C 236 0.00 1385 reject_low 11 ALIGNMENT 0 YS2-4a23.q1k vc_7 317 553 13525 13524 F 237 0.00 1385 reject_low 13 ALIGNMENT 0 YS2-4a23.q1k vc_1 550 317 2513 2512 C 234 0.00 1385 reject_low 9 ALIGNMENT 41 YS2-4a23.q1k vc_1 591 551 2472 2512 C 41 100.00 1385 reject_low 9 ALIGNMENT 0 YS2-4a23.q1k vc_7 317 553 63 62 F 237 0.00 1385 reject_low 12 ALIGNMENT 0 YS2-4a23.q1k vc_4 317 590 126 125 F 274 0.00 1385 reject_low 7 ALIGNMENT 95 YS2-4a23.q1k vc_7 830 591 2493 2727 C 240 82.08 1385 reject_low 5 ALIGNMENT 41 YS2-4a23.q1k vc_3 591 551 2472 2512 C 41 100.00 1385 reject_low 10 ALIGNMENT 0 YS2-4a23.q1k vc_3 550 317 2513 2512 C 234 0.00 1385 reject_low 10 ALIGNMENT 0 YS2-4a23.q1k vc_1 317 590 2531 2530 F 274 0.00 1385 reject_low 2 ALIGNMENT 95 YS2-4a23.q1k vc_1 591 830 2531 2765 F 240 82.08 1385 reject_low 2 ALIGNMENT 0 YS2-4a23.q1k vc_4 317 550 5831 5830 F 234 0.00 1385 reject_low 8 ALIGNMENT 93 YS2-4a23.q1k vc_4 830 591 5576 5812 C 240 81.67 1385 reject_low 6 ALIGNMENT 88 YS2-4a23.q1k vc_4 591 752 6353 6514 F 162 85.19 1385|1,0 reject_low 8 ALIGNMENT 0 YS2-4a23.q1k vc_4 590 317 5813 5812 C 274 0.00 1385 reject_low 6 ALIGNMENT 0 YS2-4a23.q1k vc_7 590 317 2728 2727 C 274 0.00 1385 reject_low 5 ALIGNMENT 95 YS2-4a23.q1k vc_5 591 830 2398 2632 F 240 82.08 1385 reject_low 4 ALIGNMENT 88 YS2-4a23.q1k vc_4 591 752 126 287 F 162 85.19 1385 reject_low 7 ALIGNMENT 41 YS2-4a23.q1k vc_4 551 591 5831 5871 F 41 100.00 1385 reject_low 8 ALIGNMENT 38 YS2-4a23.q1k vc_7 554 591 63 100 F 38 100.00 1385 reject_low 12 ALIGNMENT 0 YS2-4a23.q1k vc_4 592 591 5872 6353 F 0 0.00 1385 reject_low 8 ALIGNMENT 38 YS2-4a23.q1k vc_7 554 591 13525 13562 F 38 100.00 1385 reject_low 13 ALIGNMENT 271 YS2-4a23.q1k chr14 188 551 464773 465127 F 364 93.96 1385 accept_chi 1 ALIGNMENT 39 YS2-4a23.q1k vc_5 591 553 5025 5063 C 39 100.00 1385 reject_low 11 ALIGNMENT 0 YS2-4a23.q1k vc_5 552 317 37 36 C 236 0.00 1385 reject_low 14 ALIGNMENT 0 YS2-4a23.q1k vc_5 317 590 2398 2397 F 274 0.00 1385 reject_low 4 ALIGNMENT 206 YS2-4a24.q1k chr07 423 47 149092 149460 C 377 86.47 1500 accept 0 ALIGNMENT 911 YS2-4a24.p1k chr07 24 1252 144835 146101 F 1229 93.65 1254 accept 0 ALIGNMENT 364 YS2-4b01.p1k chr14 185 884 637329 638032 F 700 84.43 1387 accept 0 ALIGNMENT 765 YS2-4b02.q1k chr05 896 32 19624 20484 C 865 96.65 1484 accept 0 ALIGNMENT 0 YS2-4b02.q1k chr10 62 222 734545 734544 F 161 0.00 1484 reject_low 2 ALIGNMENT 63 YS2-4b02.q1k chr10 223 431 734545 734754 F 209 77.51 1484 reject_low 2 ALIGNMENT 756 YS2-4b02.q1k chr14 32 896 775405 776265 F 865 96.30 1484 reject_low 1 ALIGNMENT 0 YS2-4b02.q1k chr10 432 693 734754 734753 F 262 0.00 1484 reject_low 2 ALIGNMENT 1040 YS2-4b02.p1k chr05 36 1246 15316 16542 F 1211 96.37 1399 accept 0 ALIGNMENT 219 YS2-4b04.q1k vc_7 302 53 4923 5172 C 250 96.00 1067|0,1 reject_low 6 ALIGNMENT 0 YS2-4b04.q1k vc_4 237 62 113 112 C 176 0.00 1067 reject_low 8 ALIGNMENT 40 YS2-4b04.q1k vc_4 302 238 6275 6339 C 65 87.69 1067 reject_low 9 ALIGNMENT 98 YS2-4b04.q1k vc_4 312 537 1882 2110 F 226 82.74 1067 reject_low 7 ALIGNMENT 273 YS2-4b04.q1k vc_1 1 302 2689 2990 F 302 97.02 1067 reject_low 3 ALIGNMENT 369 YS2-4b04.q1k vc_5 1 537 2556 3094 F 537 90.32 1067 reject_vc 0 ALIGNMENT 0 YS2-4b04.q1k vc_4 62 237 1548 1547 F 176 0.00 1067 reject_low 7 ALIGNMENT 273 YS2-4b04.q1k vc_2 1 302 2322 2623 F 302 97.02 1067 reject_low 4 ALIGNMENT 0 YS2-4b04.q1k vc_7 53 54 5172 6360 C 0 0.00 1067 reject_low 6 ALIGNMENT 40 YS2-4b04.q1k vc_4 238 302 1548 1612 F 65 87.69 1067 reject_low 7 ALIGNMENT 369 YS2-4b04.q1k vc_7 537 1 2031 2569 C 537 90.32 1067 reject_vc 1 ALIGNMENT 0 YS2-4b04.q1k vc_7 311 303 4694 4922 C 9 0.00 1067 reject_low 6 ALIGNMENT 51 YS2-4b04.q1k vc_7 54 3 6360 6411 C 52 100.00 1067|1,0 reject_low 6 ALIGNMENT 0 YS2-4b04.q1k vc_4 303 311 1613 1881 F 9 0.00 1067 reject_low 7 ALIGNMENT 273 YS2-4b04.q1k vc_3 1 302 2689 2990 F 302 97.02 1067 reject_low 5 ALIGNMENT 326 YS2-4b04.q1k vc_4 419 1 5234 5654 C 419 93.08 1067 reject_low 2 ALIGNMENT 40 YS2-4b04.q1k vc_4 302 238 48 112 C 65 87.69 1067 reject_low 8 ALIGNMENT 62 YS2-4b04.q1k vc_7 419 312 4585 4693 C 108 87.04 1067 reject_low 6 ALIGNMENT 0 YS2-4b04.q1k vc_4 237 62 6340 6339 C 176 0.00 1067 reject_low 9 ALIGNMENT 0 YS2-4b06.p1k chr11 344 326 161192 161191 C 19 0.00 344 accept 0 ALIGNMENT 288 YS2-4b06.p1k chr11 325 30 161191 161486 C 296 100.00 344 accept 0 ALIGNMENT 748 YS2-4b08.q1k chr12 32 869 251335 252167 F 838 97.26 1598 accept 0 ALIGNMENT 1036 YS2-4b08.p1k chr12 1238 31 255973 257187 C 1208 96.27 1438 accept 0 ALIGNMENT 712 YS2-4b10.p1k chr08 1015 31 25793 26776 C 985 91.68 1437 accept 0 ALIGNMENT 119 YS2-4b11.p1k chr12 512 630 482044 482162 F 119 100.00 1407 reject_low 6 ALIGNMENT 551 YS2-4b11.q1k chr12 940 34 459857 460798 C 907 89.31 1473 accept 0 ALIGNMENT 0 YS2-4b11.p1k chr12 646 900 489481 489480 F 255 0.00 1407 reject_low 3 ALIGNMENT 119 YS2-4b11.p1k chr12 512 630 472464 472582 F 119 100.00 1407 reject_low 5 ALIGNMENT 0 YS2-4b11.p1k chr12 62 511 485696 485695 F 450 0.00 1407 reject_low 7 ALIGNMENT 0 YS2-4b11.p1k chr12 631 900 485814 485813 F 270 0.00 1407 reject_low 7 ALIGNMENT 128 YS2-4b11.p1k chr12 512 645 489348 489481 F 134 98.51 1407 reject_low 3 ALIGNMENT 148 YS2-4b11.q1k chr12 263 34 451419 451661 C 230 90.87 1473 reject_low 2 ALIGNMENT 940 YS2-4b11.p1k chr12 32 1199 459194 460394 F 1168 95.29 1407 accept 0 ALIGNMENT 0 YS2-4b11.q1k chr12 679 264 451420 451419 C 416 0.00 1473 reject_low 2 ALIGNMENT 0 YS2-4b11.p1k chr06 144 62 31730 31729 C 83 0.00 1407 reject_low 4 ALIGNMENT 0 YS2-4b11.p1k chr06 900 253 31623 31622 C 648 0.00 1407 reject_low 4 ALIGNMENT 0 YS2-4b11.p1k chr12 62 511 482044 482043 F 450 0.00 1407 reject_low 6 ALIGNMENT 0 YS2-4b11.p1k chr12 62 511 489348 489347 F 450 0.00 1407 reject_low 3 ALIGNMENT 0 YS2-4b11.p1k chr12 631 900 482162 482161 F 270 0.00 1407 reject_low 6 ALIGNMENT 94 YS2-4b11.p1k chr06 252 145 31622 31729 C 108 98.15 1407 reject_low 4 ALIGNMENT 119 YS2-4b11.p1k chr12 512 630 485696 485814 F 119 100.00 1407 reject_low 7 ALIGNMENT 571 YS2-4b11.p1k chr12 32 630 468331 468930 F 599 99.50 1407 reject_low 1 ALIGNMENT 0 YS2-4b11.p1k chr12 631 900 472582 472581 F 270 0.00 1407 reject_low 5 ALIGNMENT 0 YS2-4b11.p1k chr12 62 511 472464 472463 F 450 0.00 1407 reject_low 5 ALIGNMENT 0 YS2-4b11.p1k chr12 631 900 468930 468929 F 270 0.00 1407 reject_low 1 ALIGNMENT 0 YS2-4b12.q1k vc_4 237 62 6340 6339 C 176 0.00 927 reject_vc 10 ALIGNMENT 0 YS2-4b12.q1k vc_4 237 62 113 112 C 176 0.00 927 reject_vc 9 ALIGNMENT 257 YS2-4b12.p1k chr13 303 35 607551 607819 C 269 100.00 320 accept 0 ALIGNMENT 51 YS2-4b12.q1k vc_7 54 3 6360 6411 C 52 100.00 927|1,0 reject_vc 7 ALIGNMENT 51 YS2-4b12.q1k vc_4 238 304 1548 1615 F 67 92.54 927 reject_vc 8 ALIGNMENT 327 YS2-4b12.q1k vc_4 420 1 5232 5654 C 420 93.33 927 reject_vc 3 ALIGNMENT 284 YS2-4b12.q1k vc_2 1 302 2322 2624 F 302 98.34 927 reject_vc 5 ALIGNMENT 359 YS2-4b12.q1k vc_7 522 1 2046 2569 C 522 90.42 927 reject_vc 2 ALIGNMENT 359 YS2-4b12.q1k vc_5 1 522 2556 3079 F 522 90.23 927 reject_vc 1 ALIGNMENT 0 YS2-4b12.q1k vc_7 53 54 5172 6360 C 0 0.00 927 reject_vc 7 ALIGNMENT 76 YS2-4b12.q1k vc_4 306 522 1879 2095 F 217 79.72 927 reject_vc 8 ALIGNMENT 0 YS2-4b12.q1k vc_4 305 305 1616 1878 F 1 0.00 927 reject_vc 8 ALIGNMENT 0 YS2-4b12.p1k chr13 320 304 607552 607551 C 17 0.00 320 accept 0 ALIGNMENT 0 YS2-4b12.q1k vc_4 62 237 1548 1547 F 176 0.00 927 reject_vc 8 ALIGNMENT 52 YS2-4b12.q1k vc_7 420 306 4583 4696 C 115 83.48 927 reject_vc 7 ALIGNMENT 284 YS2-4b12.q1k vc_3 1 302 2689 2991 F 302 98.34 927 reject_vc 6 ALIGNMENT 229 YS2-4b12.q1k vc_7 302 53 4922 5172 C 250 97.60 927|0,1 reject_vc 7 ALIGNMENT 0 YS2-4b12.q1k vc_7 305 303 4697 4921 C 3 0.00 927 reject_vc 7 ALIGNMENT 51 YS2-4b12.q1k vc_4 304 238 6272 6339 C 67 92.54 927 reject_vc 10 ALIGNMENT 284 YS2-4b12.q1k vc_1 1 302 2689 2991 F 302 98.34 927 reject_vc 4 ALIGNMENT 51 YS2-4b12.q1k vc_4 304 238 45 112 C 67 92.54 927 reject_vc 9 ALIGNMENT 756 YS2-4b13.q1k chr02 932 30 760966 761869 C 903 96.01 1462 accept 0 ALIGNMENT 915 YS2-4b13.p1k chr02 38 1140 757008 758130 F 1103 95.83 1346 accept 0 ALIGNMENT 0 YS2-4b14.q1k vc_7 650 651 5172 6360 C 0 0.00 1413 reject_low 14 ALIGNMENT 0 YS2-4b14.q1k vc_3 534 441 2473 2472 C 94 0.00 1413 reject_low 18 ALIGNMENT 144 YS2-4b14.q1k vc_4 440 601 6353 6514 F 162 96.91 1413|1,0 reject_low 13 ALIGNMENT 0 YS2-4b14.q1k vc_1 534 441 2473 2472 C 94 0.00 1413 reject_low 16 ALIGNMENT 36 YS2-4b14.q1k vc_5 437 402 1 36 C 36 100.00 1413 reject_low 22 ALIGNMENT 0 YS2-4b14.q1k vc_7 441 534 100 99 F 94 0.00 1413 reject_low 20 ALIGNMENT 289 YS2-4b14.q1k vc_5 440 899 2398 2854 F 460 88.91 1413 reject_low 1 ALIGNMENT 316 YS2-4b14.p1k vc_2 460 1 1282 1749 C 460 90.87 642 reject_low 4 ALIGNMENT 41 YS2-4b14.q1k vc_1 440 400 2472 2512 C 41 100.00 1413 reject_low 16 ALIGNMENT 0 YS2-4b14.q1k vc_2 534 441 2106 2105 C 94 0.00 1413 reject_low 17 ALIGNMENT 0 YS2-4b14.q1k vc_5 62 439 2398 2397 F 378 0.00 1413 reject_low 1 ALIGNMENT 0 YS2-4b14.q1k chr09 534 401 38190 38189 C 134 0.00 1413 accept 0 ALIGNMENT 316 YS2-4b14.p1k vc_1 460 1 1282 1749 C 460 90.87 642 reject_low 3 ALIGNMENT 0 YS2-4b14.q1k vc_7 62 402 13525 13524 F 341 0.00 1413 reject_low 21 ALIGNMENT 284 YS2-4b14.q1k chr09 400 29 38189 38560 C 372 92.47 1413 accept 0 ALIGNMENT 144 YS2-4b14.q1k vc_4 440 601 126 287 F 162 96.91 1413 reject_low 12 ALIGNMENT 0 YS2-4b14.q1k vc_5 534 441 5026 5025 C 94 0.00 1413 reject_low 19 ALIGNMENT 39 YS2-4b14.q1k vc_5 440 402 5025 5063 C 39 100.00 1413 reject_low 19 ALIGNMENT 0 YS2-4b14.q1k vc_4 62 399 5831 5830 F 338 0.00 1413 reject_low 13 ALIGNMENT 0 YS2-4b14.q1k vc_5 401 62 5064 5063 C 340 0.00 1413 reject_low 19 ALIGNMENT 0 YS2-4b14.q1k vc_1 399 62 2513 2512 C 338 0.00 1413 reject_low 16 ALIGNMENT 310 YS2-4b14.p1k vc_7 1 460 13918 14385 F 460 90.43 642 reject_low 7 ALIGNMENT 38 YS2-4b14.q1k vc_7 403 440 13525 13562 F 38 100.00 1413 reject_low 21 ALIGNMENT 0 YS2-4b14.q1k vc_3 62 439 2531 2530 F 378 0.00 1413 reject_low 10 ALIGNMENT 38 YS2-4b14.q1k vc_7 403 440 63 100 F 38 100.00 1413 reject_low 20 ALIGNMENT 0 YS2-4b14.q1k vc_3 399 62 2513 2512 C 338 0.00 1413 reject_low 18 ALIGNMENT 310 YS2-4b14.p1k vc_7 1 460 456 923 F 460 90.43 642 reject_low 2 ALIGNMENT 0 YS2-4b14.q1k vc_4 441 440 5872 6353 F 0 0.00 1413 reject_low 13 ALIGNMENT 0 YS2-4b14.q1k vc_4 439 62 1535 1534 C 378 0.00 1413 reject_low 15 ALIGNMENT 316 YS2-4b14.p1k vc_6 1 460 3712 4179 F 460 90.87 642 reject_low 6 ALIGNMENT 289 YS2-4b14.q1k vc_1 440 899 2531 2987 F 460 88.91 1413 reject_low 8 ALIGNMENT 0 YS2-4b14.q1k vc_7 62 402 63 62 F 341 0.00 1413 reject_low 20 ALIGNMENT 0 YS2-4b14.q1k vc_1 62 439 2531 2530 F 378 0.00 1413 reject_low 8 ALIGNMENT 0 YS2-4b14.q1k vc_7 441 534 13562 13561 F 94 0.00 1413 reject_low 21 ALIGNMENT 41 YS2-4b14.q1k vc_2 440 400 2105 2145 C 41 100.00 1413 reject_low 17 ALIGNMENT 41 YS2-4b14.q1k vc_4 400 440 5831 5871 F 41 100.00 1413 reject_low 13 ALIGNMENT 0 YS2-4b14.q1k vc_4 439 62 5813 5812 C 378 0.00 1413 reject_low 11 ALIGNMENT 0 YS2-4b14.q1k vc_5 401 62 37 36 C 340 0.00 1413 reject_low 22 ALIGNMENT 0 YS2-4b14.q1k vc_5 534 438 2 1 C 97 0.00 1413 reject_low 22 ALIGNMENT 0 YS2-4b14.q1k vc_4 62 439 126 125 F 378 0.00 1413 reject_low 12 ALIGNMENT 289 YS2-4b14.q1k vc_3 440 899 2531 2987 F 460 88.91 1413 reject_low 10 ALIGNMENT 0 YS2-4b14.q1k vc_7 599 62 6412 6411 C 538 0.00 1413 reject_low 14 ALIGNMENT 316 YS2-4b14.p1k vc_3 460 1 1282 1749 C 460 90.87 642 reject_low 5 ALIGNMENT 96 YS2-4b14.q1k vc_7 899 650 4926 5172 C 250 81.60 1413|0,1 reject_low 14 ALIGNMENT 316 YS2-4b14.p1k vc_5 460 1 4202 4669 C 460 90.87 642 reject_low 1 ALIGNMENT 0 YS2-4b14.q1k vc_2 62 439 2164 2163 F 378 0.00 1413 reject_low 9 ALIGNMENT 86 YS2-4b14.q1k vc_4 526 440 1448 1534 C 87 100.00 1413 reject_low 15 ALIGNMENT 0 YS2-4b14.q1k vc_7 439 62 2728 2727 C 378 0.00 1413 reject_low 2 ALIGNMENT 0 YS2-4b14.q1k vc_2 399 62 2146 2145 C 338 0.00 1413 reject_low 17 ALIGNMENT 289 YS2-4b14.q1k vc_7 899 440 2271 2727 C 460 89.13 1413 reject_low 2 ALIGNMENT 289 YS2-4b14.q1k vc_2 440 899 2164 2620 F 460 88.91 1413 reject_low 9 ALIGNMENT 48 YS2-4b14.q1k vc_7 651 600 6360 6411 C 52 98.08 1413|1,0 reject_low 14 ALIGNMENT 282 YS2-4b14.q1k vc_4 899 440 5354 5812 C 460 88.70 1413 reject_low 11 ALIGNMENT 41 YS2-4b14.q1k vc_3 440 400 2472 2512 C 41 100.00 1413 reject_low 18 ALIGNMENT 51 YS2-4b15.q1k vc_7 54 3 6360 6411 C 52 100.00 1127|1,0 reject_low 6 ALIGNMENT 0 YS2-4b15.q1k vc_7 53 54 5172 6360 C 0 0.00 1127 reject_low 6 ALIGNMENT 241 YS2-4b15.q1k vc_4 396 1 5270 5654 C 396 89.65 1127 reject_vc 1 ALIGNMENT 238 YS2-4b15.q1k vc_3 1 305 2689 2989 F 305 93.77 1127 reject_low 5 ALIGNMENT 238 YS2-4b15.q1k vc_2 1 305 2322 2622 F 305 93.77 1127 reject_low 4 ALIGNMENT 249 YS2-4b15.q1k vc_5 1 375 2556 2920 F 375 90.93 1127 reject_vc 2 ALIGNMENT 248 YS2-4b15.q1k vc_7 396 1 2187 2569 C 396 90.15 1127 reject_vc 0 ALIGNMENT 184 YS2-4b15.q1k vc_7 305 53 4924 5172 C 253 92.09 1127|0,1 reject_low 6 ALIGNMENT 238 YS2-4b15.q1k vc_1 1 305 2689 2989 F 305 93.77 1127 reject_low 3 ALIGNMENT 113 YS2-4b16.q1k scplasm1 939 594 599 931 C 346 80.92 1451 reject_low 2 ALIGNMENT 0 YS2-4b16.q1k scplasm1 593 62 932 931 C 532 0.00 1451 reject_low 2 ALIGNMENT 1008 YS2-4b16.p1k scplasm1 1186 30 5101 6274 C 1157 97.06 1389 accept 0 ALIGNMENT 180 YS2-4b16.q1k scplasm1 65 939 3188 4054 F 875 76.23 1451 accept 0 ALIGNMENT 666 YS2-4b16.p1k vc_6 732 30 5263 5967 C 703 99.57 1389 reject_low 1 ALIGNMENT 0 YS2-4b16.p1k vc_6 889 733 5264 5263 C 157 0.00 1389 reject_low 1 ALIGNMENT 259 YS2-4b17.p1k vc_2 1253 898 1743 2105 C 356 92.13 1370 reject_low 3 ALIGNMENT 259 YS2-4b17.p1k vc_3 1253 898 1743 2105 C 356 92.13 1370 reject_low 4 ALIGNMENT 257 YS2-4b17.p1k vc_4 898 1244 5871 6223 F 347 92.51 1370 reject_low 8 ALIGNMENT 0 YS2-4b17.p1k chr16 937 880 229753 229752 C 58 0.00 1370 accept_chi 0 ALIGNMENT 259 YS2-4b17.p1k vc_5 1253 898 4663 5025 C 356 92.13 1370 reject_low 5 ALIGNMENT 0 YS2-4b17.p1k vc_2 897 62 2106 2105 C 836 0.00 1370 reject_low 3 ALIGNMENT 259 YS2-4b17.p1k vc_1 1253 898 1743 2105 C 356 92.13 1370 reject_low 2 ALIGNMENT 26 YS2-4b17.p1k vc_1 928 898 2441 2472 C 31 96.77 1370 reject_low 9 ALIGNMENT 0 YS2-4b17.p1k vc_7 62 897 13562 13561 F 836 0.00 1370 reject_low 7 ALIGNMENT 0 YS2-4b17.p1k vc_3 897 62 2106 2105 C 836 0.00 1370 reject_low 4 ALIGNMENT 0 YS2-4b17.p1k vc_1 897 62 2473 2472 C 836 0.00 1370 reject_low 9 ALIGNMENT 0 YS2-4b17.p1k vc_7 62 897 100 99 F 836 0.00 1370 reject_low 6 ALIGNMENT 259 YS2-4b17.p1k vc_7 898 1253 100 462 F 356 92.13 1370 reject_low 6 ALIGNMENT 815 YS2-4b17.p1k chr16 879 30 229752 230602 C 850 99.29 1370 accept_chi 0 ALIGNMENT 0 YS2-4b17.p1k vc_1 897 62 2106 2105 C 836 0.00 1370 reject_low 2 ALIGNMENT 0 YS2-4b17.p1k vc_3 897 62 2473 2472 C 836 0.00 1370 reject_low 10 ALIGNMENT 535 YS2-4b17.q1k chr16 20 727 229808 230518 F 708 92.80 1307 accept_chi 1 ALIGNMENT 0 YS2-4b17.p1k vc_4 62 897 5871 5870 F 836 0.00 1370 reject_low 8 ALIGNMENT 26 YS2-4b17.p1k vc_3 928 898 2441 2472 C 31 96.77 1370 reject_low 10 ALIGNMENT 0 YS2-4b17.p1k vc_5 897 62 5026 5025 C 836 0.00 1370 reject_low 5 ALIGNMENT 259 YS2-4b17.p1k vc_7 898 1253 13562 13924 F 356 92.13 1370 reject_low 7 ALIGNMENT 990 YS2-4b18.p1k chr15 1160 38 584953 586085 C 1123 95.81 1350 accept 0 ALIGNMENT 717 YS2-4b18.q1k chr15 24 921 583485 584370 F 898 96.10 1508 accept 0 ALIGNMENT 0 YS2-4b21.q1k vc_4 303 310 1613 1881 F 8 0.00 897 reject_low 11 ALIGNMENT 0 YS2-4b21.q1k vc_4 237 62 6340 6339 C 176 0.00 897 reject_low 14 ALIGNMENT 75 YS2-4b21.q1k vc_7 419 305 4583 4699 C 115 89.57 897 reject_low 12 ALIGNMENT 412 YS2-4b21.p1k vc_7 1 604 456 1062 F 604 90.07 684 reject_vc 1 ALIGNMENT 418 YS2-4b21.p1k vc_3 604 1 1143 1749 C 604 90.40 684 reject_low 5 ALIGNMENT 0 YS2-4b21.q1k vc_4 237 62 113 112 C 176 0.00 897 reject_low 13 ALIGNMENT 421 YS2-4b21.p1k vc_6 1 604 3712 4318 F 604 90.56 684 reject_low 2 ALIGNMENT 453 YS2-4b21.q1k vc_5 1 659 2556 3206 F 659 91.05 897 reject_vc 0 ALIGNMENT 418 YS2-4b21.p1k vc_2 604 1 1143 1749 C 604 90.40 684 reject_low 4 ALIGNMENT 295 YS2-4b21.q1k vc_2 1 302 2322 2623 F 302 99.34 897 reject_low 9 ALIGNMENT 295 YS2-4b21.q1k vc_3 1 302 2689 2990 F 302 99.34 897 reject_low 10 ALIGNMENT 418 YS2-4b21.p1k vc_1 604 1 1143 1749 C 604 90.40 684 reject_low 3 ALIGNMENT 421 YS2-4b21.p1k vc_5 604 1 4063 4669 C 604 90.56 684 reject_vc 0 ALIGNMENT 364 YS2-4b21.q1k vc_4 419 1 5232 5654 C 419 95.94 897 reject_low 7 ALIGNMENT 454 YS2-4b21.q1k vc_7 659 1 1919 2569 C 659 91.05 897 reject_vc 1 ALIGNMENT 240 YS2-4b21.q1k vc_7 302 53 4923 5172 C 250 98.80 897|0,1 reject_low 12 ALIGNMENT 0 YS2-4b21.q1k vc_7 304 303 4700 4922 C 2 0.00 897 reject_low 12 ALIGNMENT 0 YS2-4b21.q1k vc_4 62 237 1548 1547 F 176 0.00 897 reject_low 11 ALIGNMENT 60 YS2-4b21.q1k vc_4 302 238 48 112 C 65 98.46 897 reject_low 13 ALIGNMENT 150 YS2-4b21.q1k vc_4 311 659 1882 2222 F 349 84.24 897 reject_low 11 ALIGNMENT 51 YS2-4b21.q1k vc_7 54 3 6360 6411 C 52 100.00 897|1,0 reject_low 12 ALIGNMENT 60 YS2-4b21.q1k vc_4 302 238 6275 6339 C 65 98.46 897 reject_low 14 ALIGNMENT 60 YS2-4b21.q1k vc_4 238 302 1548 1612 F 65 98.46 897 reject_low 11 ALIGNMENT 295 YS2-4b21.q1k vc_1 1 302 2689 2990 F 302 99.34 897 reject_low 8 ALIGNMENT 412 YS2-4b21.p1k vc_7 1 604 13918 14524 F 604 90.07 684 reject_low 6 ALIGNMENT 0 YS2-4b21.q1k vc_7 53 54 5172 6360 C 0 0.00 897 reject_low 12 ALIGNMENT 529 YS2-4b22.q1k chr05 35 904 444090 444954 F 870 89.20 1421 reject_low 23 ALIGNMENT 736 YS2-4b22.q1k chr07 910 35 815848 816718 C 876 96.92 1421 ambiguous_trans 6 ALIGNMENT 728 YS2-4b22.q1k chr02 910 35 34037 34907 C 876 96.58 1421 ambiguous_trans 10 ALIGNMENT 734 YS2-4b22.q1k chr04 910 35 876212 877082 C 876 96.80 1421 ambiguous_trans 3 ALIGNMENT 871 YS2-4b22.p1k chr04 26 1138 874813 875941 F 1113 94.07 1180 ambiguous_trans 3 ALIGNMENT 746 YS2-4b22.q1k chr15 910 35 974678 975548 C 876 97.26 1421 ambiguous_trans 7 ALIGNMENT 740 YS2-4b22.q1k chr04 35 910 514377 515247 F 876 97.03 1421 ambiguous_trans 8 ALIGNMENT 553 YS2-4b22.q1k chr16 35 904 851323 852187 F 870 90.11 1421 reject_low 22 ALIGNMENT 871 YS2-4b22.p1k chr07 1138 26 570578 571706 C 1113 94.43 1180 ambiguous_trans 2 ALIGNMENT 868 YS2-4b22.p1k chr12 1138 26 977571 978699 C 1113 94.34 1180 reject_low 12 ALIGNMENT 0 YS2-4b22.q1k chr10 86 62 483136 483135 C 25 0.00 1421 reject_low 26 ALIGNMENT 727 YS2-4b22.q1k chr12 910 35 945585 946455 C 876 96.58 1421 ambiguous_trans 0 ALIGNMENT 529 YS2-4b22.q1k chr13 904 35 200694 201558 C 870 89.20 1421 reject_low 24 ALIGNMENT 595 YS2-4b22.q1k chr10 904 35 476740 477604 C 870 91.72 1421 reject_low 18 ALIGNMENT 736 YS2-4b22.q1k chr06 910 35 142304 143174 C 876 96.92 1421 ambiguous_trans 5 ALIGNMENT 868 YS2-4b22.p1k chr06 26 1138 140905 142033 F 1113 93.98 1180 ambiguous_trans 5 ALIGNMENT 849 YS2-4b22.p1k chr04 1141 26 515514 516646 C 1116 93.82 1180 ambiguous_trans 8 ALIGNMENT 862 YS2-4b22.p1k chr15 26 1138 973279 974407 F 1113 93.80 1180 ambiguous_trans 7 ALIGNMENT 849 YS2-4b22.p1k chr02 26 1141 32638 33770 F 1116 93.46 1180 ambiguous_trans 10 ALIGNMENT 562 YS2-4b22.q1k chr16 904 35 848774 849638 C 870 90.46 1421 reject_low 21 ALIGNMENT 601 YS2-4b22.q1k chr07 35 904 562541 563405 F 870 91.95 1421 reject_low 16 ALIGNMENT 332 YS2-4b22.q1k chr10 904 87 482324 483135 C 818 82.52 1421 reject_low 26 ALIGNMENT 871 YS2-4b22.p1k chr14 1138 26 563867 564995 C 1113 94.43 1180 ambiguous_trans 4 ALIGNMENT 670 YS2-4b22.q1k chr04 35 904 646191 647055 F 870 94.60 1421 reject_low 13 ALIGNMENT 731 YS2-4b22.q1k chr14 35 910 562726 563596 F 876 96.69 1421 ambiguous_trans 4 ALIGNMENT 880 YS2-4b22.p1k chr03 26 1138 87807 88935 F 1113 94.34 1180 ambiguous_trans 1 ALIGNMENT 598 YS2-4b22.q1k chr16 35 904 805335 806199 F 870 91.84 1421 reject_low 17 ALIGNMENT 868 YS2-4b22.p1k chr07 26 1138 814449 815577 F 1113 93.98 1180 ambiguous_trans 6 ALIGNMENT 455 YS2-4b22.q1k chr05 35 904 493189 494053 F 870 86.32 1421 reject_low 25 ALIGNMENT 737 YS2-4b22.q1k chr07 35 910 569437 570307 F 876 96.92 1421 ambiguous_trans 2 ALIGNMENT 731 YS2-4b22.q1k chr15 35 910 704757 705627 F 876 96.69 1421 ambiguous_trans 9 ALIGNMENT 736 YS2-4b22.q1k chr03 910 35 89206 90076 C 876 96.92 1421 ambiguous_trans 1 ALIGNMENT 649 YS2-4b22.q1k chr04 35 904 878992 879856 F 870 93.79 1421 reject_low 14 ALIGNMENT 653 YS2-4b22.q1k chr04 910 35 985561 986431 C 876 93.72 1421 ambiguous_trans 11 ALIGNMENT 895 YS2-4b22.p1k chr12 26 1138 944186 945314 F 1113 94.79 1180 ambiguous_trans 0 ALIGNMENT 646 YS2-4b22.q1k chr14 904 35 523505 524369 C 870 93.68 1421 reject_low 15 ALIGNMENT 562 YS2-4b22.q1k chr13 904 35 188527 189391 C 870 90.46 1421 reject_low 20 ALIGNMENT 865 YS2-4b22.p1k chr15 1138 26 705898 707026 C 1113 94.25 1180 ambiguous_trans 9 ALIGNMENT 865 YS2-4b22.p1k chr04 26 1138 984162 985290 F 1113 93.89 1180 ambiguous_trans 11 ALIGNMENT 577 YS2-4b22.q1k chr01 35 904 160936 161800 F 870 91.03 1421 reject_low 19 ALIGNMENT 952 YS2-4b23.p1k chr13 1164 33 736442 737573 C 1132 95.76 1169 accept 0 ALIGNMENT 1020 YS2-4b24.p1k chr10 39 1171 705987 707131 F 1133 97.53 1259 accept 0 ALIGNMENT 744 YS2-4b24.q1k chr10 962 32 708069 708987 C 931 95.17 1338 accept 0 ALIGNMENT 0 YS2-4c01.q1k chr12 346 563 472582 472581 F 218 0.00 1533 reject_low 6 ALIGNMENT 119 YS2-4c01.q1k chr12 227 345 485696 485814 F 119 100.00 1533 reject_low 4 ALIGNMENT 321 YS2-4c01.p1k chr12 1230 746 490045 490543 C 485 89.48 1327 reject_low 2,3,4 ALIGNMENT 0 YS2-4c01.q1k chr12 346 563 468930 468929 F 218 0.00 1533 reject_low 5 ALIGNMENT 0 YS2-4c01.q1k chr12 137 226 482044 482043 F 90 0.00 1533 reject_low 3 ALIGNMENT 556 YS2-4c01.q1k chr12 110 1020 459560 460463 F 911 89.68 1533 accept 0 ALIGNMENT 225 YS2-4c01.q1k chr12 110 345 468697 468930 F 236 99.15 1533 reject_low 5 ALIGNMENT 0 YS2-4c01.q1k chr12 137 226 472464 472463 F 90 0.00 1533 reject_low 6 ALIGNMENT 128 YS2-4c01.q1k chr12 227 360 489348 489481 F 134 98.51 1533 reject_low 2 ALIGNMENT 0 YS2-4c01.q1k chr12 137 226 485696 485695 F 90 0.00 1533 reject_low 4 ALIGNMENT 0 YS2-4c01.p1k chr12 745 62 490544 490543 C 684 0.00 1327 reject_low 2,3,4 ALIGNMENT 0 YS2-4c01.q1k chr12 137 226 489348 489347 F 90 0.00 1533 reject_low 2 ALIGNMENT 0 YS2-4c01.q1k chr12 346 563 482162 482161 F 218 0.00 1533 reject_low 3 ALIGNMENT 1031 YS2-4c01.p1k chr12 1230 30 452077 453291 C 1201 95.67 1327 reject_low 1 ALIGNMENT 0 YS2-4c01.q1k chr12 346 563 485814 485813 F 218 0.00 1533 reject_low 4 ALIGNMENT 0 YS2-4c01.q1k chr12 361 563 489481 489480 F 203 0.00 1533 reject_low 2 ALIGNMENT 119 YS2-4c01.q1k chr12 227 345 472464 472582 F 119 100.00 1533 reject_low 6 ALIGNMENT 119 YS2-4c01.q1k chr12 227 345 482044 482162 F 119 100.00 1533 reject_low 3 ALIGNMENT 1031 YS2-4c01.p1k chr12 1230 30 461214 462428 C 1201 95.67 1327 accept 0 ALIGNMENT 294 YS2-4c03.q1k vc_2 1 299 2322 2620 F 299 99.67 985 reject_low 4 ALIGNMENT 0 YS2-4c03.q1k vc_4 62 237 1548 1547 F 176 0.00 985 reject_low 6 ALIGNMENT 0 YS2-4c03.q1k vc_7 53 54 5172 6360 C 0 0.00 985 reject_low 7 ALIGNMENT 51 YS2-4c03.q1k vc_7 54 3 6360 6411 C 52 100.00 985|1,0 reject_low 7 ALIGNMENT 294 YS2-4c03.q1k vc_1 1 299 2689 2987 F 299 99.67 985 reject_low 3 ALIGNMENT 426 YS2-4c03.q1k vc_5 1 633 2556 3199 F 633 90.52 985 reject_vc 0 ALIGNMENT 81 YS2-4c03.q1k vc_7 426 306 4583 4699 C 121 91.74 985 reject_low 7 ALIGNMENT 58 YS2-4c03.q1k vc_4 305 238 6273 6339 C 68 97.06 985 reject_low 9 ALIGNMENT 0 YS2-4c03.q1k vc_4 237 62 6340 6339 C 176 0.00 985 reject_low 9 ALIGNMENT 58 YS2-4c03.q1k vc_4 238 305 1548 1614 F 68 97.06 985 reject_low 6 ALIGNMENT 0 YS2-4c03.q1k vc_7 305 300 4700 4925 C 6 0.00 985 reject_low 7 ALIGNMENT 58 YS2-4c03.q1k vc_4 305 238 46 112 C 68 97.06 985 reject_low 8 ALIGNMENT 372 YS2-4c03.q1k vc_4 426 1 5232 5654 C 426 96.71 985 reject_low 2 ALIGNMENT 124 YS2-4c03.q1k vc_4 309 633 1879 2215 F 325 82.15 985 reject_low 6 ALIGNMENT 0 YS2-4c03.q1k vc_4 306 308 1615 1878 F 3 0.00 985 reject_low 6 ALIGNMENT 240 YS2-4c03.q1k vc_7 299 53 4926 5172 C 247 99.19 985|0,1 reject_low 7 ALIGNMENT 0 YS2-4c03.q1k vc_4 237 62 113 112 C 176 0.00 985 reject_low 8 ALIGNMENT 294 YS2-4c03.q1k vc_3 1 299 2689 2987 F 299 99.67 985 reject_low 5 ALIGNMENT 425 YS2-4c03.q1k vc_7 523 1 2047 2569 C 523 94.84 985 reject_low 1 ALIGNMENT 225 YS2-4c04.q1k vc_7 347 1 2234 2569 C 347 90.78 1252 reject_vc 0 ALIGNMENT 213 YS2-4c04.q1k vc_1 1 273 2689 2957 F 273 94.51 1252 reject_vc 3 ALIGNMENT 213 YS2-4c04.q1k vc_2 1 273 2322 2590 F 273 94.51 1252 reject_vc 4 ALIGNMENT 48 YS2-4c04.q1k vc_7 54 3 6360 6411 C 52 98.08 1252|1,0 reject_low 6 ALIGNMENT 162 YS2-4c04.q1k vc_7 273 53 4956 5172 C 221 93.21 1252|0,1 reject_low 6 ALIGNMENT 218 YS2-4c04.q1k vc_4 347 1 5317 5654 C 347 90.20 1252 reject_vc 2 ALIGNMENT 213 YS2-4c04.q1k vc_3 1 273 2689 2957 F 273 94.51 1252 reject_vc 5 ALIGNMENT 0 YS2-4c04.q1k vc_7 53 54 5172 6360 C 0 0.00 1252 reject_low 6 ALIGNMENT 224 YS2-4c04.q1k vc_5 1 347 2556 2891 F 347 90.78 1252 reject_vc 1 ALIGNMENT 545 YS2-4c05.p1k chr05 133 849 109288 110001 F 717 92.75 1489 accept 0 ALIGNMENT 532 YS2-4c08.q1k chr08 30 699 506929 507594 F 670 94.18 1464 accept 0 ALIGNMENT 962 YS2-4c08.p1k chr08 1197 33 510421 511596 C 1165 95.28 1410 accept 0 ALIGNMENT 230 YS2-4c09.q1k chr12 505 42 460452 460929 C 464 85.99 1471 accept 0 ALIGNMENT 0 YS2-4c09.p1k chr12 337 899 482162 482161 F 563 0.00 1374 reject_low 5 ALIGNMENT 842 YS2-4c09.p1k chr12 28 1200 459485 460697 F 1173 92.33 1374 accept 0 ALIGNMENT 0 YS2-4c09.p1k chr12 337 899 485814 485813 F 563 0.00 1374 reject_low 6 ALIGNMENT 0 YS2-4c09.p1k chr12 62 217 472464 472463 F 156 0.00 1374 reject_low 4 ALIGNMENT 301 YS2-4c09.p1k chr12 28 336 468622 468930 F 309 99.68 1374 reject_low 1 ALIGNMENT 128 YS2-4c09.p1k chr12 218 351 489348 489481 F 134 98.51 1374 reject_low 3 ALIGNMENT 0 YS2-4c09.p1k chr12 62 217 482044 482043 F 156 0.00 1374 reject_low 5 ALIGNMENT 119 YS2-4c09.p1k chr12 218 336 482044 482162 F 119 100.00 1374 reject_low 5 ALIGNMENT 0 YS2-4c09.p1k chr12 62 217 489348 489347 F 156 0.00 1374 reject_low 3 ALIGNMENT 119 YS2-4c09.p1k chr12 218 336 485696 485814 F 119 100.00 1374 reject_low 6 ALIGNMENT 0 YS2-4c09.p1k chr12 337 899 472582 472581 F 563 0.00 1374 reject_low 4 ALIGNMENT 0 YS2-4c09.p1k chr12 337 899 468930 468929 F 563 0.00 1374 reject_low 1 ALIGNMENT 0 YS2-4c09.p1k chr12 352 899 489481 489480 F 548 0.00 1374 reject_low 3 ALIGNMENT 119 YS2-4c09.p1k chr12 218 336 472464 472582 F 119 100.00 1374 reject_low 4 ALIGNMENT 198 YS2-4c09.q1k chr12 400 42 451419 451792 C 359 87.74 1471 reject_low 2 ALIGNMENT 0 YS2-4c09.p1k chr12 62 217 485696 485695 F 156 0.00 1374 reject_low 6 ALIGNMENT 205 YS2-4c10.p1k chr04 46 1004 8795 9755 F 959 73.93 1388 ambiguous_tel 1 ALIGNMENT 208 YS2-4c10.p1k chr10 1004 46 735960 736920 C 959 74.04 1388 ambiguous_tel 0 ALIGNMENT 699 YS2-4c11.q1k chr02 28 936 93825 94717 F 909 94.94 1467 accept_chi 1 ALIGNMENT 959 YS2-4c11.p1k chr08 1144 37 18510 19621 C 1108 96.39 1297 accept_chi 0 ALIGNMENT 55 YS2-4c12.q1k vc_4 302 238 6275 6339 C 65 95.38 1250 reject_low 9 ALIGNMENT 0 YS2-4c12.q1k vc_7 304 303 4700 4922 C 2 0.00 1250 reject_low 6 ALIGNMENT 0 YS2-4c12.q1k vc_4 237 62 113 112 C 176 0.00 1250 reject_low 8 ALIGNMENT 225 YS2-4c12.q1k vc_7 302 53 4923 5172 C 250 96.80 1250|0,1 reject_low 6 ALIGNMENT 77 YS2-4c12.q1k vc_4 311 545 1882 2103 F 235 82.13 1250 reject_low 7 ALIGNMENT 361 YS2-4c12.q1k vc_7 545 1 2038 2569 C 545 90.64 1250 reject_vc 1 ALIGNMENT 361 YS2-4c12.q1k vc_5 1 545 2556 3087 F 545 90.64 1250 reject_vc 0 ALIGNMENT 279 YS2-4c12.q1k vc_2 1 302 2322 2623 F 302 97.68 1250 reject_low 4 ALIGNMENT 0 YS2-4c12.q1k vc_4 62 237 1548 1547 F 176 0.00 1250 reject_low 7 ALIGNMENT 55 YS2-4c12.q1k vc_4 238 302 1548 1612 F 65 95.38 1250 reject_low 7 ALIGNMENT 279 YS2-4c12.q1k vc_1 1 302 2689 2990 F 302 97.68 1250 reject_low 3 ALIGNMENT 55 YS2-4c12.q1k vc_4 302 238 48 112 C 65 95.38 1250 reject_low 8 ALIGNMENT 341 YS2-4c12.q1k vc_4 410 1 5244 5654 C 410 94.88 1250 reject_low 2 ALIGNMENT 279 YS2-4c12.q1k vc_3 1 302 2689 2990 F 302 97.68 1250 reject_low 5 ALIGNMENT 0 YS2-4c12.q1k vc_4 237 62 6340 6339 C 176 0.00 1250 reject_low 9 ALIGNMENT 51 YS2-4c12.q1k vc_7 54 3 6360 6411 C 52 100.00 1250|1,0 reject_low 6 ALIGNMENT 0 YS2-4c12.q1k vc_7 53 54 5172 6360 C 0 0.00 1250 reject_low 6 ALIGNMENT 0 YS2-4c12.q1k vc_4 303 310 1613 1881 F 8 0.00 1250 reject_low 7 ALIGNMENT 69 YS2-4c12.q1k vc_7 410 305 4595 4699 C 106 89.62 1250 reject_low 6 ALIGNMENT 973 YS2-4c13.p1k chr15 31 1234 562155 563371 F 1204 95.02 1353 accept 0 ALIGNMENT 622 YS2-4c13.q1k chr15 927 41 566174 567046 C 887 92.78 1457 accept 0 ALIGNMENT 674 YS2-4c14.q1k chr16 1 854 340461 341324 F 854 94.03 1174 accept 0 ALIGNMENT 943 YS2-4c14.p1k chr16 1118 30 343399 344498 C 1089 96.97 1359 accept 0 ALIGNMENT 589 YS2-4c15.q1k chr16 772 25 373324 374058 C 748 94.79 1693 accept 0 ALIGNMENT 1045 YS2-4c15.p1k chr16 36 1181 368147 369303 F 1146 97.91 1357 accept 0 ALIGNMENT 0 YS2-4c16.q1k chr03 332 501 84717 84716 F 170 0.00 1257 reject_low 32 ALIGNMENT 28 YS2-4c16.q1k chr04 92 20 513514 513586 C 73 82.19 1257 reject_low 33 ALIGNMENT 0 YS2-4c16.q1k chr14 354 501 525064 525063 F 148 0.00 1257 reject_low 11 ALIGNMENT 304 YS2-4c16.q1k chr03 1 342 90418 90758 F 342 98.83 1257 reject_low 5 ALIGNMENT 0 YS2-4c16.q1k chr03 343 501 90758 90757 F 159 0.00 1257 reject_low 5 ALIGNMENT 0 YS2-4c16.q1k chr05 501 344 431496 431495 C 158 0.00 1257 reject_low 17 ALIGNMENT 0 YS2-4c16.q1k chr01 501 344 160249 160248 C 158 0.00 1257 reject_low 23 ALIGNMENT 0 YS2-4c16.q1k chr03 356 501 149809 149808 F 146 0.00 1257 reject_low 27 ALIGNMENT 0 YS2-4c16.q1k chr10 352 62 198182 198181 C 291 0.00 1257 ambiguous_trans 1 ALIGNMENT 0 YS2-4c16.q1k chr05 358 501 62479 62478 F 144 0.00 1257 reject_low 7 ALIGNMENT 229 YS2-4c16.q1k chr01 343 1 160248 160594 C 343 91.55 1257 reject_low 23 ALIGNMENT 0 YS2-4c16.q1k chr08 501 354 389180 389179 C 148 0.00 1257 reject_low 15 ALIGNMENT 0 YS2-4c16.q1k chr03 62 240 84626 84625 F 179 0.00 1257 reject_low 32 ALIGNMENT 298 YS2-4c16.q1k chr14 342 1 562044 562384 C 342 98.25 1257 reject_low 12 ALIGNMENT 0 YS2-4c16.q1k chr12 343 501 947137 947136 F 159 0.00 1257 reject_low 6 ALIGNMENT 286 YS2-4c16.q1k chr10 20 342 538017 538338 F 323 98.76 1257 reject_low 18 ALIGNMENT 270 YS2-4c16.q1k chr14 20 343 519164 519488 F 324 96.91 1257 reject_low 22 ALIGNMENT 0 YS2-4c16.q1k chr07 330 501 817387 817386 F 172 0.00 1257 reject_low 10 ALIGNMENT 286 YS2-4c16.q1k chr12 20 342 941189 941510 F 323 98.76 1257 reject_low 19 ALIGNMENT 0 YS2-4c16.q1k chr03 343 501 85131 85130 F 159 0.00 1257 reject_low 20 ALIGNMENT 0 YS2-4c16.q1k chr03 343 501 151838 151837 F 159 0.00 1257 reject_low 25 ALIGNMENT 297 YS2-4c16.q1k chr05 20 357 62142 62479 F 338 98.52 1257 reject_low 7 ALIGNMENT 36 YS2-4c16.q1k chr03 241 331 84626 84717 F 91 82.42 1257 reject_low 32 ALIGNMENT 42 YS2-4c16.q1k chr10 170 53 537832 537948 C 118 81.36 1257 reject_low 30 ALIGNMENT 0 YS2-4c16.q1k chr03 501 302 142799 142798 C 200 0.00 1257 reject_low 28 ALIGNMENT 977 YS2-4c16.p1k chr12 1184 34 784382 785554 C 1151 96.26 1384 accept 0 ALIGNMENT 299 YS2-4c16.q1k chr09 20 352 246217 246549 F 333 99.10 1257 reject_low 14 ALIGNMENT 0 YS2-4c16.q1k chr10 501 171 537833 537832 C 331 0.00 1257 reject_low 30 ALIGNMENT 79 YS2-4c16.q1k chr03 53 355 149513 149809 F 303 79.54 1257 reject_low 27 ALIGNMENT 310 YS2-4c16.q1k chr04 342 1 513695 514035 C 342 99.42 1257 reject_low 4 ALIGNMENT 109 YS2-4c16.q1k chr03 20 342 151518 151838 F 323 81.73 1257 reject_low 25 ALIGNMENT 0 YS2-4c16.q1k chr12 343 501 941510 941509 F 159 0.00 1257 reject_low 19 ALIGNMENT 0 YS2-4c16.q1k chr10 343 501 538338 538337 F 159 0.00 1257 reject_low 18 ALIGNMENT 0 YS2-4c16.q1k chr06 62 284 143869 143868 F 223 0.00 1257 reject_low 31 ALIGNMENT 277 YS2-4c16.q1k chr03 343 19 168604 168929 C 325 97.54 1257 reject_low 21 ALIGNMENT 66 YS2-4c16.q1k chr03 301 20 142798 143077 C 282 77.66 1257 reject_low 28 ALIGNMENT 301 YS2-4c16.q1k chr06 1 342 143516 143856 F 342 98.54 1257 reject_low 9 ALIGNMENT 0 YS2-4c16.q1k chr03 501 344 168605 168604 C 158 0.00 1257 reject_low 21 ALIGNMENT 0 YS2-4c16.q1k chr12 501 357 731667 731666 C 145 0.00 1257 reject_low 8 ALIGNMENT 0 YS2-4c16.q1k chr14 501 343 562045 562044 C 159 0.00 1257 reject_low 12 ALIGNMENT 305 YS2-4c16.q1k chr12 356 20 731666 732002 C 337 99.41 1257 reject_low 8 ALIGNMENT 0 YS2-4c16.q1k chr03 501 344 124141 124140 C 158 0.00 1257 reject_low 26 ALIGNMENT 0 YS2-4c16.q1k chr13 501 355 168348 168347 C 147 0.00 1257 reject_low 13 ALIGNMENT 0 YS2-4c16.q1k chr07 501 333 817419 817418 C 169 0.00 1257 reject_low 29 ALIGNMENT 0 YS2-4c16.q1k chr14 344 501 519488 519487 F 158 0.00 1257 reject_low 22 ALIGNMENT 0 YS2-4c16.q1k chr07 218 62 817533 817532 C 157 0.00 1257 reject_low 29 ALIGNMENT 312 YS2-4c16.q1k chr15 353 1 704063 704415 C 353 98.58 1257 reject_low 3 ALIGNMENT 0 YS2-4c16.q1k chr04 501 353 519313 519312 C 149 0.00 1257 reject_low 16 ALIGNMENT 0 YS2-4c16.q1k chr09 353 501 246549 246548 F 149 0.00 1257 reject_low 14 ALIGNMENT 34 YS2-4c16.q1k chr06 285 345 143869 143930 F 61 90.16 1257 reject_low 31 ALIGNMENT 287 YS2-4c16.q1k chr14 1 353 524711 525064 F 353 96.32 1257 reject_low 11 ALIGNMENT 0 YS2-4c16.q1k chr01 501 344 165837 165836 C 158 0.00 1257 reject_low 24 ALIGNMENT 104 YS2-4c16.q1k chr03 343 20 124140 124462 C 324 80.86 1257 reject_low 26 ALIGNMENT 0 YS2-4c16.p1k chr07 887 298 511910 511909 C 590 0.00 1384 reject_low 2 ALIGNMENT 295 YS2-4c16.q1k chr04 352 20 519312 519643 C 333 98.80 1257 reject_low 16 ALIGNMENT 0 YS2-4c16.q1k chr15 501 354 704064 704063 C 148 0.00 1257 reject_low 3 ALIGNMENT 304 YS2-4c16.q1k chr12 1 342 946797 947137 F 342 98.83 1257 reject_low 6 ALIGNMENT 211 YS2-4c16.q1k chr01 343 20 165836 166163 C 324 91.05 1257 reject_low 24 ALIGNMENT 68 YS2-4c16.q1k chr07 332 219 817418 817532 C 114 88.60 1257 reject_low 29 ALIGNMENT 0 YS2-4c16.q1k chr04 501 93 513515 513514 C 409 0.00 1257 reject_low 33 ALIGNMENT 78 YS2-4c16.p1k chr07 297 34 511909 512172 C 264 77.27 1384 reject_low 2 ALIGNMENT 283 YS2-4c16.q1k chr03 20 342 84810 85131 F 323 98.45 1257 reject_low 20 ALIGNMENT 361 YS2-4c16.q1k chr10 845 353 197688 198181 C 493 93.10 1257 ambiguous_trans 1 ALIGNMENT 295 YS2-4c16.q1k chr13 354 20 168347 168681 C 335 98.51 1257 reject_low 13 ALIGNMENT 300 YS2-4c16.q1k chr07 1 329 817060 817387 F 329 99.70 1257 reject_low 10 ALIGNMENT 0 YS2-4c16.q1k chr06 343 501 143856 143855 F 159 0.00 1257 reject_low 9 ALIGNMENT 0 YS2-4c16.q1k chr06 346 501 143930 143929 F 156 0.00 1257 reject_low 31 ALIGNMENT 292 YS2-4c16.q1k chr05 343 20 431495 431818 C 324 99.07 1257 reject_low 17 ALIGNMENT 297 YS2-4c16.q1k chr08 353 20 389179 389512 C 334 98.80 1257 reject_low 15 ALIGNMENT 0 YS2-4c16.q1k chr04 501 343 513696 513695 C 159 0.00 1257 reject_low 4 ALIGNMENT 770 YS2-4c17.q1k chr09 1015 26 179589 180565 C 990 94.55 1410 accept 0 ALIGNMENT 924 YS2-4c17.p1k chr09 35 1128 175516 176616 F 1094 95.34 1233 accept 0 ALIGNMENT 426 YS2-4c18.p1k chr16 502 28 679690 680161 C 475 98.11 521 accept 0 ALIGNMENT 0 YS2-4c18.p1k chr16 521 503 679691 679690 C 19 0.00 521 accept 0 ALIGNMENT 192 YS2-4c19.p1k chr12 33 225 464499 464691 F 193 100.00 244 accept 1 ALIGNMENT 0 YS2-4c19.p1k chr12 226 244 464691 464690 F 19 0.00 244 accept 1 ALIGNMENT 0 YS2-4c19.p1k chr12 226 244 455554 455553 F 19 0.00 244 accept 0 ALIGNMENT 192 YS2-4c19.p1k chr12 33 225 455362 455554 F 193 100.00 244 accept 0 ALIGNMENT 53 YS2-4c20.p1k chr05 678 288 433248 433638 C 391 72.12 1324 reject_low 2 ALIGNMENT 175 YS2-4c20.p1k chr04 691 201 1336203 1336693 C 491 79.43 1324 reject_low 1 ALIGNMENT 0 YS2-4c20.p1k chr05 287 62 433639 433638 C 226 0.00 1324 reject_low 2 ALIGNMENT 0 YS2-4c20.p1k chr04 200 62 1336694 1336693 C 139 0.00 1324 reject_low 1 ALIGNMENT 925 YS2-4c20.p1k chr13 32 1081 239589 240648 F 1050 97.52 1324 accept 0 ALIGNMENT 846 YS2-4c20.q1k chr13 1023 32 240646 241635 C 992 96.17 1409 accept 0 ALIGNMENT 0 YS2-4c20.p1k chr04 915 692 1336204 1336203 C 224 0.00 1324 reject_low 1 ALIGNMENT 0 YS2-4c20.p1k chr05 915 679 433249 433248 C 237 0.00 1324 reject_low 2 ALIGNMENT 226 YS2-4c21.p1k chr10 267 29 69903 70141 C 239 98.74 286 accept 0 ALIGNMENT 0 YS2-4c21.p1k chr10 286 268 69904 69903 C 19 0.00 286 accept 0 ALIGNMENT 0 YS2-4c22.q1k chr16 62 566 212815 212814 F 505 0.00 1365 reject_low 1 ALIGNMENT 0 YS2-4c22.q1k chr13 618 658 239394 239393 F 41 0.00 1365 reject_low 2 ALIGNMENT 0 YS2-4c22.q1k chr16 614 658 212859 212858 F 45 0.00 1365 reject_low 1 ALIGNMENT 886 YS2-4c22.p1k chr15 26 1113 322273 323381 F 1088 95.31 1182 accept 0 ALIGNMENT 0 YS2-4c22.q1k chr13 62 576 239354 239353 F 515 0.00 1365 reject_low 2 ALIGNMENT 22 YS2-4c22.q1k chr13 577 617 239354 239394 F 41 95.12 1365 reject_low 2 ALIGNMENT 20 YS2-4c22.q1k chr15 577 611 355083 355117 F 35 100.00 1365 reject_low 4 ALIGNMENT 21 YS2-4c22.q1k chr16 567 613 212815 212859 F 47 91.49 1365 reject_low 1 ALIGNMENT 20 YS2-4c22.q1k chr11 613 585 136104 136132 C 29 100.00 1365 reject_low 5 ALIGNMENT 0 YS2-4c22.q1k chr15 612 658 355117 355116 F 47 0.00 1365 reject_low 4 ALIGNMENT 0 YS2-4c22.q1k chr04 614 658 323716 323715 F 45 0.00 1365 reject_low 3 ALIGNMENT 0 YS2-4c22.q1k chr11 658 614 136105 136104 C 45 0.00 1365 reject_low 5 ALIGNMENT 22 YS2-4c22.q1k chr04 574 613 323677 323716 F 40 95.00 1365 reject_low 3 ALIGNMENT 0 YS2-4c22.q1k chr11 584 62 136133 136132 C 523 0.00 1365 reject_low 5 ALIGNMENT 0 YS2-4c22.q1k chr04 62 573 323677 323676 F 512 0.00 1365 reject_low 3 ALIGNMENT 737 YS2-4c22.q1k chr15 1000 33 325806 326763 C 968 94.52 1365 accept 0 ALIGNMENT 0 YS2-4c22.q1k chr15 62 576 355083 355082 F 515 0.00 1365 reject_low 4 ALIGNMENT 0 YS2-4c24.q1k vc_4 62 239 1550 1549 F 178 0.00 995 reject_low 7 ALIGNMENT 60 YS2-4c24.q1k vc_4 304 240 6273 6337 C 65 98.46 995 reject_low 9 ALIGNMENT 296 YS2-4c24.q1k vc_2 1 303 2322 2624 F 303 99.34 995 reject_low 4 ALIGNMENT 241 YS2-4c24.q1k vc_7 303 53 4922 5172 C 251 98.80 995|0,1 reject_low 6 ALIGNMENT 60 YS2-4c24.q1k vc_4 240 304 1550 1614 F 65 98.46 995 reject_low 7 ALIGNMENT 296 YS2-4c24.q1k vc_1 1 303 2689 2991 F 303 99.34 995 reject_low 3 ALIGNMENT 380 YS2-4c24.q1k vc_7 542 1 2042 2569 C 542 92.07 995 reject_vc 1 ALIGNMENT 296 YS2-4c24.q1k vc_3 1 303 2689 2991 F 303 99.34 995 reject_low 5 ALIGNMENT 76 YS2-4c24.q1k vc_4 308 542 1879 2099 F 235 82.55 995 reject_low 7 ALIGNMENT 0 YS2-4c24.q1k vc_4 239 62 111 110 C 178 0.00 995 reject_low 8 ALIGNMENT 380 YS2-4c24.q1k vc_5 1 542 2556 3083 F 542 92.07 995 reject_vc 0 ALIGNMENT 56 YS2-4c24.q1k vc_7 416 305 4590 4699 C 112 85.71 995 reject_low 6 ALIGNMENT 0 YS2-4c24.q1k vc_4 305 307 1615 1878 F 3 0.00 995 reject_low 7 ALIGNMENT 348 YS2-4c24.q1k vc_4 416 1 5239 5654 C 416 95.19 995 reject_low 2 ALIGNMENT 0 YS2-4c24.q1k vc_7 53 54 5172 6360 C 0 0.00 995 reject_low 6 ALIGNMENT 51 YS2-4c24.q1k vc_7 54 3 6360 6411 C 52 100.00 995|1,0 reject_low 6 ALIGNMENT 60 YS2-4c24.q1k vc_4 304 240 46 110 C 65 98.46 995 reject_low 8 ALIGNMENT 0 YS2-4c24.q1k vc_7 304 304 4700 4921 C 1 0.00 995 reject_low 6 ALIGNMENT 0 YS2-4c24.q1k vc_4 239 62 6338 6337 C 178 0.00 995 reject_low 9 ALIGNMENT 954 YS2-4d02.p1k chr04 1136 30 447836 448954 C 1107 96.84 1388 accept 0 ALIGNMENT 777 YS2-4d02.q1k chr04 27 972 445417 446364 F 946 95.14 1531 accept 0 ALIGNMENT 977 YS2-4d03.p1k chr09 29 1107 150625 151713 F 1079 97.59 1351 accept 0 ALIGNMENT 499 YS2-4d03.q1k chr09 665 3 151487 152144 C 663 93.51 1372 accept 0 ALIGNMENT 640 YS2-4d05.q1k chr05 32 830 539095 539886 F 799 94.62 1526 accept 0 ALIGNMENT 868 YS2-4d05.p1k chr05 1030 30 540323 541328 C 1001 97.40 1384 accept 0 ALIGNMENT 245 YS2-4d06.q1k vc_2 405 860 2164 2623 F 456 85.96 1468 reject_low 5 ALIGNMENT 0 YS2-4d06.q1k vc_2 364 62 2146 2145 C 303 0.00 1468 reject_low 11 ALIGNMENT 0 YS2-4d06.q1k vc_1 488 406 2473 2472 C 83 0.00 1468 reject_low 10 ALIGNMENT 137 YS2-4d06.q1k vc_4 405 568 6353 6514 F 164 95.73 1468|1,0 reject_low 8 ALIGNMENT 0 YS2-4d06.q1k vc_1 62 404 2531 2530 F 343 0.00 1468 reject_low 4 ALIGNMENT 0 YS2-4d06.q1k vc_4 62 404 126 125 F 343 0.00 1468 reject_low 7 ALIGNMENT 41 YS2-4d06.q1k vc_4 365 405 5831 5871 F 41 100.00 1468 reject_low 8 ALIGNMENT 0 YS2-4d06.q1k vc_5 366 62 37 36 C 305 0.00 1468 reject_low 14 ALIGNMENT 0 YS2-4d06.q1k vc_5 62 404 2398 2397 F 343 0.00 1468 reject_low 1 ALIGNMENT 0 YS2-4d06.q1k vc_5 488 403 2 1 C 86 0.00 1468 reject_low 14 ALIGNMENT 252 YS2-4d06.q1k vc_5 405 909 2398 2906 F 505 84.75 1468 reject_low 1 ALIGNMENT 41 YS2-4d06.q1k vc_2 405 365 2105 2145 C 41 100.00 1468 reject_low 11 ALIGNMENT 0 YS2-4d06.q1k vc_2 62 404 2164 2163 F 343 0.00 1468 reject_low 5 ALIGNMENT 0 YS2-4d06.q1k vc_3 364 62 2513 2512 C 303 0.00 1468 reject_low 12 ALIGNMENT 0 YS2-4d06.q1k vc_4 62 364 5831 5830 F 303 0.00 1468 reject_low 8 ALIGNMENT 0 YS2-4d06.q1k vc_2 488 406 2106 2105 C 83 0.00 1468 reject_low 11 ALIGNMENT 252 YS2-4d06.q1k vc_7 909 405 2219 2727 C 505 84.75 1468 reject_low 2 ALIGNMENT 41 YS2-4d06.q1k vc_1 405 365 2472 2512 C 41 100.00 1468 reject_low 10 ALIGNMENT 240 YS2-4d06.q1k chr04 364 28 681827 682152 C 337 93.18 1468 accept 0 ALIGNMENT 0 YS2-4d06.q1k vc_5 366 62 5064 5063 C 305 0.00 1468 reject_low 13 ALIGNMENT 0 YS2-4d06.q1k chr04 488 365 681828 681827 C 124 0.00 1468 accept 0 ALIGNMENT 137 YS2-4d06.q1k vc_4 405 568 126 287 F 164 95.73 1468 reject_low 7 ALIGNMENT 0 YS2-4d06.q1k vc_3 62 404 2531 2530 F 343 0.00 1468 reject_low 6 ALIGNMENT 36 YS2-4d06.q1k vc_5 402 367 1 36 C 36 100.00 1468 reject_low 14 ALIGNMENT 0 YS2-4d06.q1k vc_4 404 62 5813 5812 C 343 0.00 1468 reject_low 3 ALIGNMENT 0 YS2-4d06.q1k vc_4 404 62 1535 1534 C 343 0.00 1468 reject_low 9 ALIGNMENT 0 YS2-4d06.q1k vc_1 364 62 2513 2512 C 303 0.00 1468 reject_low 10 ALIGNMENT 245 YS2-4d06.q1k vc_1 405 860 2531 2990 F 456 85.96 1468 reject_low 4 ALIGNMENT 41 YS2-4d06.q1k vc_3 405 365 2472 2512 C 41 100.00 1468 reject_low 12 ALIGNMENT 0 YS2-4d06.q1k vc_3 488 406 2473 2472 C 83 0.00 1468 reject_low 12 ALIGNMENT 0 YS2-4d06.q1k vc_5 488 406 5026 5025 C 83 0.00 1468 reject_low 13 ALIGNMENT 245 YS2-4d06.q1k vc_3 405 860 2531 2990 F 456 85.96 1468 reject_low 6 ALIGNMENT 0 YS2-4d06.q1k vc_7 404 62 2728 2727 C 343 0.00 1468 reject_low 2 ALIGNMENT 0 YS2-4d06.q1k vc_4 406 405 5872 6353 F 0 0.00 1468 reject_low 8 ALIGNMENT 247 YS2-4d06.q1k vc_4 909 405 5302 5812 C 505 84.36 1468 reject_low 3 ALIGNMENT 87 YS2-4d06.q1k vc_4 492 405 1447 1534 C 88 100.00 1468 reject_low 9 ALIGNMENT 39 YS2-4d06.q1k vc_5 405 367 5025 5063 C 39 100.00 1468 reject_low 13 ALIGNMENT 0 YS2-4d07.p1k chr15 836 62 105711 105710 C 775 0.00 1347 reject_low 1 ALIGNMENT 924 YS2-4d07.p1k chr08 30 1094 95014 96093 F 1065 96.53 1347 accept 0 ALIGNMENT 788 YS2-4d07.q1k chr08 943 30 98582 99497 C 914 95.73 1554 accept 0 ALIGNMENT 0 YS2-4d07.p1k chr15 899 881 105668 105667 C 19 0.00 1347 reject_low 1 ALIGNMENT 27 YS2-4d07.p1k chr15 880 837 105667 105710 C 44 86.36 1347 reject_low 1 ALIGNMENT 824 YS2-4d08.q1k chr11 28 1042 3887 4901 F 1015 95.17 1451 accept 0 ALIGNMENT 984 YS2-4d08.p1k chr11 1185 30 4198 5372 C 1156 96.19 1445 accept 0 ALIGNMENT 21 YS2-4d10.q1k vc_4 273 309 1575 1611 F 37 89.19 851 reject_vc 9 ALIGNMENT 21 YS2-4d10.q1k vc_4 309 273 49 85 C 37 89.19 851 reject_vc 8 ALIGNMENT 137 YS2-4d10.q1k vc_7 309 53 4924 5172 C 257 86.77 851|0,1 reject_vc 7 ALIGNMENT 191 YS2-4d10.q1k vc_3 1 309 2689 2989 F 309 89.32 851 reject_vc 3 ALIGNMENT 0 YS2-4d10.p1k chr02 390 408 416914 416913 F 19 0.00 408 accept 0 ALIGNMENT 191 YS2-4d10.q1k vc_1 1 309 2689 2989 F 309 89.32 851 reject_vc 1 ALIGNMENT 351 YS2-4d10.p1k chr02 26 389 416550 416914 F 364 99.73 408 accept 0 ALIGNMENT 191 YS2-4d10.q1k vc_7 309 1 2269 2569 C 309 89.32 851 reject_vc 5 ALIGNMENT 184 YS2-4d10.q1k vc_4 309 1 5352 5654 C 309 88.67 851 reject_vc 6 ALIGNMENT 0 YS2-4d10.q1k vc_7 53 54 5172 6360 C 0 0.00 851 reject_vc 7 ALIGNMENT 191 YS2-4d10.q1k vc_2 1 309 2322 2622 F 309 89.32 851 reject_vc 2 ALIGNMENT 191 YS2-4d10.q1k vc_5 1 309 2556 2856 F 309 89.32 851 reject_vc 4 ALIGNMENT 51 YS2-4d10.q1k vc_7 54 3 6360 6411 C 52 100.00 851|1,0 reject_vc 7 ALIGNMENT 21 YS2-4d10.q1k vc_4 309 273 6276 6312 C 37 89.19 851 reject_vc 10 ALIGNMENT 36 YS2-4d11.q1k vc_5 867 832 1 36 C 36 100.00 1427 reject_low 11 ALIGNMENT 0 YS2-4d11.q1k vc_4 871 62 1534 1533 C 810 0.00 1427 reject_low 10 ALIGNMENT 0 YS2-4d11.q1k vc_3 62 871 2532 2531 F 810 0.00 1427 reject_low 5 ALIGNMENT 67 YS2-4d11.q1k vc_1 872 1051 2532 2711 F 180 81.11 1427 reject_low 4 ALIGNMENT 0 YS2-4d11.q1k vc_4 871 62 5812 5811 C 810 0.00 1427 reject_low 2 ALIGNMENT 38 YS2-4d11.q1k vc_4 830 867 5831 5868 F 38 100.00 1427 reject_low 15 ALIGNMENT 0 YS2-4d11.q1k vc_7 871 62 2727 2726 C 810 0.00 1427 reject_low 3 ALIGNMENT 36 YS2-4d11.q1k vc_5 867 832 5028 5063 C 36 100.00 1427 reject_low 12 ALIGNMENT 35 YS2-4d11.q1k vc_7 833 867 63 97 F 35 100.00 1427 reject_low 13 ALIGNMENT 0 YS2-4d11.q1k vc_7 849 62 13157 13156 C 788 0.00 1427 reject_low 16 ALIGNMENT 0 YS2-4d11.q1k vc_4 62 871 127 126 F 810 0.00 1427 reject_low 7 ALIGNMENT 0 YS2-4d11.q1k vc_7 62 832 13525 13524 F 771 0.00 1427 reject_low 14 ALIGNMENT 778 YS2-4d11.p1k chr16 833 33 634504 635304 C 801 100.00 834 accept_chi 0 ALIGNMENT 0 YS2-4d11.q1k vc_5 62 871 2399 2398 F 810 0.00 1427 reject_low 6 ALIGNMENT 20 YS2-4d11.q1k vc_7 869 850 13137 13156 C 20 100.00 1427 reject_low 16 ALIGNMENT 67 YS2-4d11.q1k vc_3 872 1051 2532 2711 F 180 81.11 1427 reject_low 5 ALIGNMENT 0 YS2-4d11.q1k vc_5 831 62 5064 5063 C 770 0.00 1427 reject_low 12 ALIGNMENT 0 YS2-4d11.q1k vc_1 62 871 2532 2531 F 810 0.00 1427 reject_low 4 ALIGNMENT 45 YS2-4d11.q1k vc_4 958 872 1448 1533 C 87 87.36 1427 reject_low 10 ALIGNMENT 60 YS2-4d11.q1k vc_4 872 1032 127 287 F 161 81.37 1427 reject_low 7 ALIGNMENT 38 YS2-4d11.q1k vc_3 867 830 2475 2512 C 38 100.00 1427 reject_low 9 ALIGNMENT 0 YS2-4d11.q1k vc_5 831 62 37 36 C 770 0.00 1427 reject_low 11 ALIGNMENT 68 YS2-4d11.q1k vc_4 1051 872 5632 5811 C 180 81.67 1427 reject_low 2 ALIGNMENT 67 YS2-4d11.q1k vc_5 872 1051 2399 2578 F 180 81.11 1427 reject_low 6 ALIGNMENT 0 YS2-4d11.q1k vc_4 62 829 5831 5830 F 768 0.00 1427 reject_low 15 ALIGNMENT 0 YS2-4d11.q1k vc_3 829 62 2513 2512 C 768 0.00 1427 reject_low 9 ALIGNMENT 770 YS2-4d11.q1k chr16 29 829 634504 635304 F 801 99.63 1427 accept_chi 1 ALIGNMENT 0 YS2-4d11.q1k vc_7 62 832 63 62 F 771 0.00 1427 reject_low 13 ALIGNMENT 35 YS2-4d11.q1k vc_7 833 867 13525 13559 F 35 100.00 1427 reject_low 14 ALIGNMENT 60 YS2-4d11.q1k vc_4 872 1032 6354 6514 F 161 81.37 1427 reject_low 15 ALIGNMENT 0 YS2-4d11.q1k vc_4 868 871 5869 6353 F 4 0.00 1427 reject_low 15 ALIGNMENT 38 YS2-4d11.q1k vc_1 867 830 2475 2512 C 38 100.00 1427 reject_low 8 ALIGNMENT 68 YS2-4d11.q1k vc_7 1051 872 2547 2726 C 180 81.67 1427 reject_low 3 ALIGNMENT 0 YS2-4d11.q1k vc_1 829 62 2513 2512 C 768 0.00 1427 reject_low 8 ALIGNMENT 1068 YS2-4d13.p1k chr02 1257 30 361252 362483 C 1228 96.34 1435 accept 0 ALIGNMENT 688 YS2-4d13.q1k chr02 2 798 358175 358963 F 797 97.37 1543 accept 0 ALIGNMENT 297 YS2-4d14.p1k vc_5 988 350 4223 4856 C 639 82.79 1589 reject_vc 3 ALIGNMENT 291 YS2-4d14.p1k vc_7 350 988 269 902 F 639 82.47 1589 reject_vc 4 ALIGNMENT 124 YS2-4d14.p1k vc_4 350 539 6040 6226 F 190 89.47 1589 reject_low 7 ALIGNMENT 297 YS2-4d14.p1k vc_1 988 350 1303 1936 C 639 82.79 1589 reject_vc 0 ALIGNMENT 231 YS2-4d14.p1k vc_6 413 862 3587 4033 F 450 84.44 1589 reject_low 6 ALIGNMENT 291 YS2-4d14.p1k vc_7 350 988 13731 14364 F 639 82.47 1589 reject_vc 5 ALIGNMENT 297 YS2-4d14.p1k vc_2 988 350 1303 1936 C 639 82.79 1589 reject_vc 1 ALIGNMENT 297 YS2-4d14.p1k vc_3 988 350 1303 1936 C 639 82.79 1589 reject_vc 2 ALIGNMENT 0 YS2-4d15.q1k chr10 785 62 354256 354255 C 724 0.00 1501 reject_low 6 ALIGNMENT 992 YS2-4d15.p1k chr06 30 1206 162817 164006 F 1177 95.84 1435 accept 0 ALIGNMENT 96 YS2-4d15.q1k chr13 882 784 168794 168892 C 99 98.99 1501 reject_low 4 ALIGNMENT 0 YS2-4d15.q1k chr13 782 62 838026 838025 C 721 0.00 1501 reject_low 2 ALIGNMENT 846 YS2-4d15.q1k chr06 1162 32 167150 168278 C 1131 93.63 1501 accept 0 ALIGNMENT 0 YS2-4d15.q1k chr06 62 783 210598 210597 F 722 0.00 1501 reject_low 1 ALIGNMENT 107 YS2-4d15.q1k chr06 784 893 210598 210707 F 110 99.09 1501 reject_low 1 ALIGNMENT 91 YS2-4d15.q1k chr04 888 786 946299 946401 C 103 96.12 1501 reject_low 3 ALIGNMENT 91 YS2-4d15.q1k chr10 882 786 354159 354255 C 97 97.94 1501 reject_low 6 ALIGNMENT 93 YS2-4d15.q1k chr15 881 783 288192 288290 C 99 97.98 1501 reject_low 5 ALIGNMENT 0 YS2-4d15.q1k chr04 785 62 946402 946401 C 724 0.00 1501 reject_low 3 ALIGNMENT 0 YS2-4d15.q1k chr13 783 62 168893 168892 C 722 0.00 1501 reject_low 4 ALIGNMENT 0 YS2-4d15.q1k chr15 782 62 288291 288290 C 721 0.00 1501 reject_low 5 ALIGNMENT 0 YS2-4d15.q1k chr10 62 785 542863 542862 F 724 0.00 1501 reject_low 7 ALIGNMENT 88 YS2-4d15.q1k chr10 786 882 542863 542959 F 97 96.91 1501 reject_low 7 ALIGNMENT 98 YS2-4d15.q1k chr13 883 783 837925 838025 C 101 99.01 1501 reject_low 2 ALIGNMENT 252 YS2-4d18.p1k vc_1 410 1 1347 1749 C 410 87.56 814 reject_low 2 ALIGNMENT 54 YS2-4d18.q1k vc_4 303 237 6275 6340 C 67 95.52 1027 reject_low 13 ALIGNMENT 0 YS2-4d18.q1k vc_7 305 304 4700 4922 C 2 0.00 1027 reject_low 11 ALIGNMENT 284 YS2-4d18.q1k vc_1 1 303 2689 2990 F 303 98.35 1027 reject_low 8 ALIGNMENT 72 YS2-4d18.q1k vc_4 312 504 1882 2077 F 193 80.83 1027 reject_low 14 ALIGNMENT 339 YS2-4d18.q1k vc_4 416 1 5236 5654 C 416 94.47 1027 reject_low 7 ALIGNMENT 252 YS2-4d18.p1k vc_2 410 1 1347 1749 C 410 87.56 814 reject_low 3 ALIGNMENT 62 YS2-4d18.q1k vc_7 416 306 4587 4699 C 111 86.49 1027 reject_low 11 ALIGNMENT 252 YS2-4d18.p1k vc_3 410 1 1347 1749 C 410 87.56 814 reject_low 4 ALIGNMENT 246 YS2-4d18.p1k vc_7 1 410 456 858 F 410 87.56 814 reject_vc 1 ALIGNMENT 51 YS2-4d18.q1k vc_7 54 3 6360 6411 C 52 100.00 1027|1,0 reject_low 11 ALIGNMENT 0 YS2-4d18.q1k vc_7 53 54 5172 6360 C 0 0.00 1027 reject_low 11 ALIGNMENT 0 YS2-4d18.q1k vc_4 62 236 1547 1546 F 175 0.00 1027 reject_low 14 ALIGNMENT 0 YS2-4d18.q1k vc_4 236 62 114 113 C 175 0.00 1027 reject_low 12 ALIGNMENT 246 YS2-4d18.p1k vc_7 1 410 13918 14320 F 410 87.56 814 reject_low 5 ALIGNMENT 252 YS2-4d18.p1k vc_5 410 1 4267 4669 C 410 87.56 814 reject_vc 0 ALIGNMENT 54 YS2-4d18.q1k vc_4 237 303 1547 1612 F 67 95.52 1027 reject_low 14 ALIGNMENT 284 YS2-4d18.q1k vc_3 1 303 2689 2990 F 303 98.35 1027 reject_low 10 ALIGNMENT 0 YS2-4d18.q1k vc_4 236 62 6341 6340 C 175 0.00 1027 reject_low 13 ALIGNMENT 244 YS2-4d18.p1k vc_6 1 388 3712 4093 F 388 88.40 814 reject_low 6 ALIGNMENT 284 YS2-4d18.q1k vc_2 1 303 2322 2623 F 303 98.35 1027 reject_low 9 ALIGNMENT 0 YS2-4d18.q1k vc_4 304 311 1613 1881 F 8 0.00 1027 reject_low 14 ALIGNMENT 359 YS2-4d18.q1k vc_7 495 1 2073 2569 C 495 91.52 1027 reject_vc 1 ALIGNMENT 230 YS2-4d18.q1k vc_7 303 53 4923 5172 C 251 97.61 1027|0,1 reject_low 11 ALIGNMENT 362 YS2-4d18.q1k vc_5 1 504 2556 3061 F 504 91.27 1027 reject_vc 0 ALIGNMENT 54 YS2-4d18.q1k vc_4 303 237 48 113 C 67 95.52 1027 reject_low 12 ALIGNMENT 750 YS2-4d19.q1k chr14 33 986 620489 621426 F 954 94.76 1428 accept 0 ALIGNMENT 1070 YS2-4d19.p1k chr14 1250 32 621814 623044 C 1219 96.88 1378 accept 0 ALIGNMENT 734 YS2-4d21.q1k chr09 1040 28 142153 143156 C 1013 92.89 1379 accept 0 ALIGNMENT 978 YS2-4d21.p1k chr09 33 1192 141056 142215 F 1160 96.03 1345 accept 0 ALIGNMENT 249 YS2-4d23.p1k chr13 286 29 482665 482923 C 258 99.22 305 accept 0 ALIGNMENT 0 YS2-4d23.p1k chr13 305 287 482666 482665 C 19 0.00 305 accept 0 ALIGNMENT 0 YS2-4d24.p1k vc_1 943 62 2473 2472 C 882 0.00 1291 reject_low 8 ALIGNMENT 152 YS2-4d24.p1k vc_3 1185 944 1864 2105 C 242 89.26 1291 reject_low 3 ALIGNMENT 152 YS2-4d24.p1k vc_2 1185 944 1864 2105 C 242 89.26 1291 reject_low 2 ALIGNMENT 736 YS2-4d24.q1k chr14 901 25 297388 298260 C 877 95.90 1352 accept 0 ALIGNMENT 0 YS2-4d24.p1k vc_7 62 943 100 99 F 882 0.00 1291 reject_low 6 ALIGNMENT 0 YS2-4d24.p1k vc_7 62 943 13562 13561 F 882 0.00 1291 reject_low 7 ALIGNMENT 152 YS2-4d24.p1k vc_7 944 1185 100 341 F 242 89.26 1291 reject_low 6 ALIGNMENT 26 YS2-4d24.p1k vc_3 974 944 2441 2472 C 31 96.77 1291 reject_low 9 ALIGNMENT 0 YS2-4d24.p1k vc_2 943 62 2106 2105 C 882 0.00 1291 reject_low 2 ALIGNMENT 152 YS2-4d24.p1k vc_4 944 1185 5871 6112 F 242 89.26 1291 reject_low 4 ALIGNMENT 152 YS2-4d24.p1k vc_1 1185 944 1864 2105 C 242 89.26 1291 reject_low 1 ALIGNMENT 806 YS2-4d24.p1k chr14 25 925 297366 298260 F 901 97.67 1291 accept 0 ALIGNMENT 0 YS2-4d24.p1k vc_3 943 62 2473 2472 C 882 0.00 1291 reject_low 9 ALIGNMENT 0 YS2-4d24.p1k vc_4 62 943 5871 5870 F 882 0.00 1291 reject_low 4 ALIGNMENT 152 YS2-4d24.p1k vc_7 944 1185 13562 13803 F 242 89.26 1291 reject_low 7 ALIGNMENT 0 YS2-4d24.p1k vc_1 943 62 2106 2105 C 882 0.00 1291 reject_low 1 ALIGNMENT 152 YS2-4d24.p1k vc_5 1185 944 4784 5025 C 242 89.26 1291 reject_low 5 ALIGNMENT 0 YS2-4d24.p1k vc_5 943 62 5026 5025 C 882 0.00 1291 reject_low 5 ALIGNMENT 26 YS2-4d24.p1k vc_1 974 944 2441 2472 C 31 96.77 1291 reject_low 8 ALIGNMENT 0 YS2-4d24.p1k vc_3 943 62 2106 2105 C 882 0.00 1291 reject_low 3 ALIGNMENT 1061 YS2-4e01.p1k chr02 1290 30 112860 114130 C 1261 95.64 1363 accept 0 ALIGNMENT 636 YS2-4e01.q1k chr02 7 817 111279 112081 F 811 93.71 1406 accept 0 ALIGNMENT 1031 YS2-4e02.p1k chr16 1216 35 791503 792701 C 1182 96.53 1362 reject_bad_break 0 ALIGNMENT 0 YS2-4e02.q1k chr16 75 74 786523 786504 F 0 0.00 1410 reject_bad_break 0 ALIGNMENT 45 YS2-4e02.q1k chr16 27 74 786475 786522 F 48 97.92 1410 reject_bad_break 0 ALIGNMENT 772 YS2-4e02.q1k chr16 75 985 786505 787424 F 911 95.94 1410 reject_bad_break 0 ALIGNMENT 0 YS2-4e03.p1k chr13 866 62 768854 768853 C 805 0.00 1330 reject_low 21 ALIGNMENT 0 YS2-4e03.p1k chr05 850 62 62466 62465 C 789 0.00 1330 reject_low 19 ALIGNMENT 0 YS2-4e03.p1k chr03 850 62 83027 83026 C 789 0.00 1330 reject_low 1 ALIGNMENT 0 YS2-4e03.p1k chr07 848 62 115267 115266 C 787 0.00 1330 reject_low 16 ALIGNMENT 0 YS2-4e03.p1k chr04 866 62 1352941 1352940 C 805 0.00 1330 reject_low 20 ALIGNMENT 0 YS2-4e03.p1k chr16 850 62 560801 560800 C 789 0.00 1330 reject_low 5 ALIGNMENT 42 YS2-4e03.p1k chr04 951 867 1352858 1352940 C 85 85.88 1330 reject_low 20 ALIGNMENT 56 YS2-4e03.p1k chr12 951 859 651050 651142 C 93 89.25 1330 reject_low 18 ALIGNMENT 0 YS2-4e03.p1k chr15 861 62 600715 600714 C 800 0.00 1330 reject_low 14 ALIGNMENT 72 YS2-4e03.p1k chr04 1015 862 1095925 1096079 C 154 85.06 1330 reject_low 9 ALIGNMENT 71 YS2-4e03.p1k chr16 1015 851 560635 560800 C 165 83.64 1330 reject_low 5 ALIGNMENT 33 YS2-4e03.p1k chr07 951 867 817303 817385 C 85 82.35 1330 reject_low 22 ALIGNMENT 953 YS2-4e03.p1k chr05 1145 34 312131 313255 C 1112 96.13 1330 accept 0 ALIGNMENT 58 YS2-4e03.p1k chr14 961 851 524944 525054 C 111 86.49 1330 reject_low 17 ALIGNMENT 75 YS2-4e03.p1k chr04 1015 851 1151187 1151351 C 165 84.85 1330 reject_low 3 ALIGNMENT 0 YS2-4e03.p1k chr13 62 861 372716 372715 F 800 0.00 1330 reject_low 12 ALIGNMENT 76 YS2-4e03.p1k chr07 1015 852 535927 536091 C 164 84.76 1330 reject_low 2 ALIGNMENT 0 YS2-4e03.p1k chr03 861 62 169520 169519 C 800 0.00 1330 reject_low 8 ALIGNMENT 71 YS2-4e03.p1k chr07 1015 851 876109 876275 C 165 83.64 1330 reject_low 4 ALIGNMENT 72 YS2-4e03.p1k chr13 1015 862 184327 184481 C 154 85.06 1330 reject_low 11 ALIGNMENT 72 YS2-4e03.p1k chr15 1015 862 117865 118019 C 154 85.06 1330 reject_low 13 ALIGNMENT 0 YS2-4e03.p1k chr13 861 62 184482 184481 C 800 0.00 1330 reject_low 11 ALIGNMENT 72 YS2-4e03.p1k chr13 859 1015 362603 362760 F 157 84.71 1330 reject_low 7 ALIGNMENT 0 YS2-4e03.p1k chr04 861 62 1096080 1096079 C 800 0.00 1330 reject_low 9 ALIGNMENT 0 YS2-4e03.p1k chr15 861 62 118020 118019 C 800 0.00 1330 reject_low 13 ALIGNMENT 0 YS2-4e03.p1k chr13 62 858 357021 357020 F 797 0.00 1330 reject_low 6 ALIGNMENT 42 YS2-4e03.p1k chr13 951 867 768771 768853 C 85 85.88 1330 reject_low 21 ALIGNMENT 72 YS2-4e03.p1k chr03 1015 862 169365 169519 C 154 85.06 1330 reject_low 8 ALIGNMENT 44 YS2-4e03.p1k chr05 951 851 62366 62465 C 101 83.17 1330 reject_low 19 ALIGNMENT 0 YS2-4e03.p1k chr13 62 858 362603 362602 F 797 0.00 1330 reject_low 7 ALIGNMENT 72 YS2-4e03.p1k chr07 862 1015 817418 817572 F 154 85.06 1330 reject_low 10 ALIGNMENT 0 YS2-4e03.p1k chr04 850 62 1151352 1151351 C 789 0.00 1330 reject_low 3 ALIGNMENT 72 YS2-4e03.p1k chr13 859 1015 357021 357178 F 157 84.71 1330 reject_low 6 ALIGNMENT 72 YS2-4e03.p1k chr13 862 1015 372716 372870 F 154 85.06 1330 reject_low 12 ALIGNMENT 77 YS2-4e03.p1k chr03 1015 851 82861 83026 C 165 84.85 1330 reject_low 1 ALIGNMENT 0 YS2-4e03.p1k chr07 850 62 876276 876275 C 789 0.00 1330 reject_low 4 ALIGNMENT 72 YS2-4e03.p1k chr15 1015 862 600560 600714 C 154 85.06 1330 reject_low 14 ALIGNMENT 65 YS2-4e03.p1k chr13 1015 863 202081 202234 C 153 83.66 1330 reject_low 15 ALIGNMENT 60 YS2-4e03.p1k chr07 1015 849 115099 115266 C 167 81.44 1330 reject_low 16 ALIGNMENT 0 YS2-4e03.p1k chr07 851 62 536092 536091 C 790 0.00 1330 reject_low 2 ALIGNMENT 678 YS2-4e03.q1k chr05 29 941 308017 308931 F 913 92.99 1415 accept 0 ALIGNMENT 0 YS2-4e03.p1k chr07 62 861 817418 817417 F 800 0.00 1330 reject_low 10 ALIGNMENT 0 YS2-4e03.p1k chr14 850 62 525055 525054 C 789 0.00 1330 reject_low 17 ALIGNMENT 0 YS2-4e03.p1k chr07 866 62 817386 817385 C 805 0.00 1330 reject_low 22 ALIGNMENT 0 YS2-4e03.p1k chr13 862 62 202235 202234 C 801 0.00 1330 reject_low 15 ALIGNMENT 0 YS2-4e03.p1k chr12 858 62 651143 651142 C 797 0.00 1330 reject_low 18 ALIGNMENT 212 YS2-4e04.q1k vc_2 1 276 2322 2596 F 276 93.12 846 reject_low 9 ALIGNMENT 237 YS2-4e04.q1k vc_5 1 455 2556 3020 F 455 85.71 846 reject_vc 0 ALIGNMENT 0 YS2-4e04.q1k vc_7 53 54 5172 6360 C 0 0.00 846 reject_low 11 ALIGNMENT 261 YS2-4e04.p1k vc_1 486 1 1265 1749 C 486 85.80 658 reject_low 2 ALIGNMENT 259 YS2-4e04.p1k vc_7 1 486 456 940 F 486 85.60 658 reject_low 1 ALIGNMENT 236 YS2-4e04.q1k vc_7 428 1 2134 2569 C 428 86.45 846 reject_low 1 ALIGNMENT 212 YS2-4e04.q1k vc_1 1 276 2689 2963 F 276 93.12 846 reject_low 8 ALIGNMENT 158 YS2-4e04.q1k vc_7 276 53 4950 5172 C 224 91.07 846|0,1 reject_low 11 ALIGNMENT 51 YS2-4e04.q1k vc_7 54 3 6360 6411 C 52 100.00 846|1,0 reject_low 11 ALIGNMENT 242 YS2-4e04.p1k vc_6 1 382 3712 4088 F 382 88.74 658 reject_low 6 ALIGNMENT 261 YS2-4e04.p1k vc_2 486 1 1265 1749 C 486 85.80 658 reject_low 3 ALIGNMENT 221 YS2-4e04.q1k vc_4 396 1 5250 5654 C 396 86.87 846 reject_low 7 ALIGNMENT 261 YS2-4e04.p1k vc_5 486 1 4185 4669 C 486 85.80 658 reject_vc 0 ALIGNMENT 261 YS2-4e04.p1k vc_3 486 1 1265 1749 C 486 85.80 658 reject_low 4 ALIGNMENT 212 YS2-4e04.q1k vc_3 1 276 2689 2963 F 276 93.12 846 reject_low 10 ALIGNMENT 259 YS2-4e04.p1k vc_7 1 486 13918 14402 F 486 85.60 658 reject_low 5 ALIGNMENT 324 YS2-4e05.p1k chr05 134 708 109294 109861 F 575 86.43 1526 accept 0 ALIGNMENT 972 YS2-4e07.p1k chr05 30 1148 109192 110329 F 1119 96.87 1381 accept 0 ALIGNMENT 762 YS2-4e07.q1k chr05 937 31 113079 113979 C 907 96.14 1510 accept 0 ALIGNMENT 958 YS2-4e09.p1k chr08 27 1148 438081 439207 F 1122 96.35 1358 accept 0 ALIGNMENT 689 YS2-4e09.q1k chr08 821 27 442388 443173 C 795 96.60 1556 accept 0 ALIGNMENT 941 YS2-4e10.p1k chr12 1114 37 306453 307542 C 1078 97.22 1332 accept 0 ALIGNMENT 777 YS2-4e10.q1k chr12 24 978 301565 302509 F 955 95.50 1502 accept 0 ALIGNMENT 974 YS2-4e11.p1k chr05 33 1180 38532 39688 F 1148 96.25 1373 accept 0 ALIGNMENT 787 YS2-4e11.q1k chr05 1048 27 39925 40943 C 1022 93.25 1396 accept 0 ALIGNMENT 937 YS2-4e14.p1k chr10 30 1132 161437 162550 F 1103 96.74 1377 accept 0 ALIGNMENT 887 YS2-4e14.q1k chr10 1157 25 164124 165258 C 1133 94.44 1443 accept 0 ALIGNMENT 138 YS2-4e15.q1k vc_7 281 1 2291 2569 C 281 85.05 763 reject_vc 6 ALIGNMENT 47 YS2-4e15.q1k vc_7 55 3 6360 6411 C 53 98.11 763|1,0 reject_vc 8 ALIGNMENT 0 YS2-4e15.q1k vc_7 54 55 5172 6360 C 0 0.00 763 reject_vc 8 ALIGNMENT 0 YS2-4e15.p1k chr12 492 475 461673 461672 C 18 0.00 492 accept 1 ALIGNMENT 436 YS2-4e15.p1k chr12 474 37 461672 462109 C 438 99.77 492 accept 1 ALIGNMENT 138 YS2-4e15.q1k vc_5 1 281 2556 2834 F 281 85.05 763 reject_vc 5 ALIGNMENT 88 YS2-4e15.q1k vc_7 281 54 4946 5172 C 228 81.58 763|0,1 reject_vc 8 ALIGNMENT 138 YS2-4e15.q1k vc_2 1 281 2322 2600 F 281 85.05 763 reject_vc 3 ALIGNMENT 138 YS2-4e15.q1k vc_3 1 281 2689 2967 F 281 85.05 763 reject_vc 4 ALIGNMENT 138 YS2-4e15.q1k vc_1 1 281 2689 2967 F 281 85.05 763 reject_vc 2 ALIGNMENT 436 YS2-4e15.p1k chr12 474 37 452535 452972 C 438 99.77 492 accept 0 ALIGNMENT 131 YS2-4e15.q1k vc_4 281 1 5374 5654 C 281 84.34 763 reject_vc 7 ALIGNMENT 0 YS2-4e15.p1k chr12 492 475 452536 452535 C 18 0.00 492 accept 0 ALIGNMENT 178 YS2-4e16.q1k vc_1 2 315 2689 2990 F 314 88.22 991 reject_vc 4 ALIGNMENT 280 YS2-4e16.p1k chr02 325 30 230041 230336 C 296 99.66 345 accept 0 ALIGNMENT 178 YS2-4e16.q1k vc_4 383 2 5289 5654 C 382 85.60 991 reject_vc 3 ALIGNMENT 178 YS2-4e16.q1k vc_3 2 315 2689 2990 F 314 88.22 991 reject_vc 6 ALIGNMENT 185 YS2-4e16.q1k vc_7 383 2 2206 2569 C 382 86.13 991 reject_vc 2 ALIGNMENT 185 YS2-4e16.q1k vc_5 2 383 2556 2919 F 382 86.13 991 reject_vc 1 ALIGNMENT 0 YS2-4e16.q1k vc_7 56 57 5172 6360 C 0 0.00 991 reject_vc 7 ALIGNMENT 131 YS2-4e16.q1k vc_7 315 56 4923 5172 C 260 86.15 991|0,1 reject_vc 7 ALIGNMENT 0 YS2-4e16.p1k chr02 345 326 230042 230041 C 20 0.00 345 accept 0 ALIGNMENT 43 YS2-4e16.q1k vc_7 57 4 6360 6411 C 54 96.30 991|1,0 reject_vc 7 ALIGNMENT 178 YS2-4e16.q1k vc_2 2 315 2322 2623 F 314 88.22 991 reject_vc 5 ALIGNMENT 0 YS2-4e17.p1k chr04 362 344 412594 412593 C 19 0.00 362 accept 0 ALIGNMENT 312 YS2-4e17.p1k chr04 343 31 412593 412905 C 313 100.00 362 accept 0 ALIGNMENT 700 YS2-4e18.p1k chr14 33 883 349318 350170 F 851 95.18 1128 accept 0 ALIGNMENT 739 YS2-4e18.q1k chr14 948 34 352323 353229 C 915 95.52 1466 accept 0 ALIGNMENT 905 YS2-4e20.q1k chr11 1129 31 155522 156612 C 1099 95.54 1402 accept 0 ALIGNMENT 702 YS2-4e20.p1k chr11 148 1063 150001 150901 F 916 93.12 1334 accept 0 ALIGNMENT 958 YS2-4e23.p1k chr12 38 1135 890973 892061 F 1098 96.72 1310 accept 0 ALIGNMENT 749 YS2-4e23.q1k chr12 986 32 891396 892347 C 955 93.51 1286 accept 0 ALIGNMENT 161 YS2-4e24.p1k chr01 243 29 17224 17442 C 215 93.95 1113 reject_low 2 ALIGNMENT 750 YS2-4e24.p1k chr01 29 920 214654 215545 F 892 96.86 1113 ambiguous_tel 0 ALIGNMENT 61 YS2-4e24.q1k chr11 194 46 646474 646622 C 149 80.54 1435 reject_low 6 ALIGNMENT 275 YS2-4e24.p1k chr01 920 450 16755 17230 C 471 88.54 1113 reject_low 2 ALIGNMENT 736 YS2-4e24.q1k chr08 835 33 538511 539310 C 803 98.13 1435 ambiguous_tel 1 ALIGNMENT 148 YS2-4e24.q1k chr08 522 33 525476 525968 C 490 77.55 1435 reject_low 3 ALIGNMENT 638 YS2-4e24.q1k chr01 33 835 13585 14381 F 803 94.27 1435 reject_low 2 ALIGNMENT 0 YS2-4e24.q1k chr01 377 695 27738 27737 F 319 0.00 1435 reject_low 4 ALIGNMENT 0 YS2-4e24.q1k chr08 695 523 525477 525476 C 173 0.00 1435 reject_low 3 ALIGNMENT 0 YS2-4e24.q1k chr01 695 434 203568 203567 C 262 0.00 1435 reject_low 5 ALIGNMENT 750 YS2-4e24.p1k chr08 29 920 535265 536156 F 892 96.86 1113 ambiguous_tel 1 ALIGNMENT 118 YS2-4e24.q1k chr01 433 51 203567 203951 C 383 77.81 1435 reject_low 5 ALIGNMENT 135 YS2-4e24.q1k chr01 33 376 27393 27738 F 344 80.52 1435 reject_low 4 ALIGNMENT 736 YS2-4e24.q1k chr01 835 33 217900 218699 C 803 98.13 1435 ambiguous_tel 0 ALIGNMENT 0 YS2-4e24.q1k chr11 695 195 646475 646474 C 501 0.00 1435 reject_low 6 ALIGNMENT 0 YS2-4e24.p1k chr01 449 244 17231 17223 C 206 0.00 1113 reject_low 2 ALIGNMENT 0 YS2-4f01.p1k vc_7 62 1053 13566 13565 F 992 0.00 1450 reject_low 6 ALIGNMENT 99 YS2-4f01.p1k vc_1 1255 1054 1901 2101 C 202 84.65 1450 reject_low 2 ALIGNMENT 0 YS2-4f01.p1k vc_2 1053 62 2102 2101 C 992 0.00 1450 reject_low 3 ALIGNMENT 0 YS2-4f01.p1k vc_4 62 1053 5875 5874 F 992 0.00 1450 reject_low 5 ALIGNMENT 99 YS2-4f01.p1k vc_3 1255 1054 1901 2101 C 202 84.65 1450 reject_low 4 ALIGNMENT 99 YS2-4f01.p1k vc_2 1255 1054 1901 2101 C 202 84.65 1450 reject_low 3 ALIGNMENT 99 YS2-4f01.p1k vc_4 1054 1247 5875 6068 F 194 85.57 1450 reject_low 5 ALIGNMENT 0 YS2-4f01.p1k vc_1 1053 62 2102 2101 C 992 0.00 1450 reject_low 2 ALIGNMENT 922 YS2-4f01.p1k chr15 1031 36 416547 417549 C 996 98.29 1450 accept_chi 0 ALIGNMENT 0 YS2-4f01.p1k vc_3 1053 62 2102 2101 C 992 0.00 1450 reject_low 4 ALIGNMENT 798 YS2-4f01.q1k chr15 31 986 416547 417501 F 956 95.50 1469 accept_chi 1 ALIGNMENT 99 YS2-4f01.p1k vc_7 1054 1247 13566 13759 F 194 85.57 1450 reject_low 6 ALIGNMENT 784 YS2-4f02.q1k chr12 29 946 631838 632753 F 918 96.30 1443 accept 0 ALIGNMENT 897 YS2-4f02.p1k chr12 1045 34 635669 636691 C 1012 97.53 1278 accept 0 ALIGNMENT 0 YS2-4f03.p1k chrm 62 484 76588 76587 F 423 0.00 1358 reject_low 5 ALIGNMENT 0 YS2-4f03.p1k chrm 326 62 33534 33533 C 265 0.00 1358 reject_low 9 ALIGNMENT 0 YS2-4f03.q1k chrm 229 399 82920 82919 F 171 0.00 1305 reject_low 1 ALIGNMENT 0 YS2-4f03.p1k chrm 818 534 33450 33449 C 285 0.00 1358 reject_low 9 ALIGNMENT 0 YS2-4f03.p1k chrm 62 486 69439 69438 F 425 0.00 1358 reject_low 4 ALIGNMENT 76 YS2-4f03.q1k chrm 89 228 82785 82920 F 140 87.86 1305 reject_low 1 ALIGNMENT 349 YS2-4f03.q1k chrm 419 3 70256 70672 C 417 99.52 1305 accept 0 ALIGNMENT 0 YS2-4f03.p1k chrm 593 818 69543 69542 F 226 0.00 1358 reject_low 4 ALIGNMENT 65 YS2-4f03.p1k chrm 487 592 69439 69543 F 106 90.57 1358 reject_low 4 ALIGNMENT 44 YS2-4f03.p1k chrm 490 543 10744 10797 F 54 94.44 1358 reject_low 3 ALIGNMENT 55 YS2-4f03.q1k chrm 157 217 53663 53723 F 61 96.72 1305 reject_low 2 ALIGNMENT 0 YS2-4f03.p1k chrm 818 536 2751 2750 C 283 0.00 1358 reject_low 7 ALIGNMENT 0 YS2-4f03.p1k chrm 484 141 2801 2842 C 344 0.00 1358 reject_low 7 ALIGNMENT 0 YS2-4f03.q1k chrm 218 399 53723 53722 F 182 0.00 1305 reject_low 2 ALIGNMENT 0 YS2-4f03.p1k chrm 636 818 52917 52916 F 183 0.00 1358 reject_low 6 ALIGNMENT 60 YS2-4f03.p1k chrm 52 113 2552 2613 F 62 100.00 1358 reject_low 3 ALIGNMENT 0 YS2-4f03.p1k chrm 62 491 10394 10393 F 430 0.00 1358 reject_low 8 ALIGNMENT 0 YS2-4f03.p1k chrm 485 369 33496 33491 C 117 0.00 1358 reject_low 9 ALIGNMENT 49 YS2-4f03.p1k chrm 535 485 2750 2800 C 51 100.00 1358 reject_low 7 ALIGNMENT 52 YS2-4f03.p1k chrm 485 579 76588 76680 F 95 88.42 1358 reject_low 5 ALIGNMENT 0 YS2-4f03.p1k chrm 114 489 2614 10743 F 376 0.00 1358 reject_low 3 ALIGNMENT 0 YS2-4f03.p1k chrm 62 491 52772 52771 F 430 0.00 1358 reject_low 6 ALIGNMENT 0 YS2-4f03.q1k chrm 62 156 53663 53662 F 95 0.00 1305 reject_low 2 ALIGNMENT 20 YS2-4f03.p1k chrm 368 327 33492 33533 C 42 97.62 1358 reject_low 9 ALIGNMENT 0 YS2-4f03.q1k chrm 62 88 82785 82784 F 27 0.00 1305 reject_low 1 ALIGNMENT 0 YS2-4f03.p1k chrm 544 818 10797 10796 F 275 0.00 1358 reject_low 3 ALIGNMENT 0 YS2-4f03.p1k chrm 580 818 76680 76679 F 239 0.00 1358 reject_low 5 ALIGNMENT 31 YS2-4f03.p1k chrm 492 635 52772 52917 F 144 80.56 1358 reject_low 6 ALIGNMENT 38 YS2-4f03.p1k chrm 533 486 33449 33495 C 48 95.83 1358 reject_low 9 ALIGNMENT 0 YS2-4f03.p1k chrm 536 818 10436 10435 F 283 0.00 1358 reject_low 8 ALIGNMENT 0 YS2-4f03.p1k chrm 98 62 2885 2884 C 37 0.00 1358 reject_low 7 ALIGNMENT 34 YS2-4f03.p1k chrm 492 535 10394 10436 F 44 97.73 1358 reject_low 8 ALIGNMENT 41 YS2-4f03.p1k chrm 140 99 2843 2884 C 42 100.00 1358 reject_low 7 ALIGNMENT 603 YS2-4f03.p1k chrm 32 886 68590 69444 F 855 96.73 1358 accept 0 ALIGNMENT 330 YS2-4f04.p1k vc_2 522 1 1223 1749 C 522 89.08 739 reject_low 4 ALIGNMENT 324 YS2-4f04.p1k vc_7 1 522 456 982 F 522 88.70 739 reject_vc 1 ALIGNMENT 48 YS2-4f04.q1k vc_4 303 238 6275 6339 C 66 92.42 908 reject_low 14 ALIGNMENT 269 YS2-4f04.q1k vc_3 1 303 2689 2990 F 303 96.70 908 reject_low 10 ALIGNMENT 330 YS2-4f04.p1k vc_1 522 1 1223 1749 C 522 89.08 739 reject_low 3 ALIGNMENT 0 YS2-4f04.q1k vc_4 62 237 1548 1547 F 176 0.00 908 reject_low 12 ALIGNMENT 51 YS2-4f04.q1k vc_7 54 3 6360 6411 C 52 100.00 908|1,0 reject_low 11 ALIGNMENT 328 YS2-4f04.q1k vc_5 1 534 2556 3095 F 534 88.39 908 reject_vc 0 ALIGNMENT 328 YS2-4f04.q1k vc_7 534 1 2030 2569 C 534 88.58 908 reject_vc 1 ALIGNMENT 48 YS2-4f04.q1k vc_4 303 238 48 112 C 66 92.42 908 reject_low 13 ALIGNMENT 269 YS2-4f04.q1k vc_2 1 303 2322 2623 F 303 96.70 908 reject_low 9 ALIGNMENT 333 YS2-4f04.p1k vc_6 1 522 3712 4238 F 522 89.27 739 reject_low 2 ALIGNMENT 333 YS2-4f04.p1k vc_5 522 1 4143 4669 C 522 89.27 739 reject_vc 0 ALIGNMENT 330 YS2-4f04.p1k vc_3 522 1 1223 1749 C 522 89.08 739 reject_low 5 ALIGNMENT 0 YS2-4f04.q1k vc_4 237 62 113 112 C 176 0.00 908 reject_low 13 ALIGNMENT 269 YS2-4f04.q1k vc_1 1 303 2689 2990 F 303 96.70 908 reject_low 8 ALIGNMENT 294 YS2-4f04.q1k vc_4 421 1 5232 5654 C 421 90.97 908 reject_low 7 ALIGNMENT 57 YS2-4f04.q1k vc_4 312 534 1882 2111 F 223 78.03 908 reject_low 12 ALIGNMENT 0 YS2-4f04.q1k vc_7 53 54 5172 6360 C 0 0.00 908 reject_low 11 ALIGNMENT 0 YS2-4f04.q1k vc_4 237 62 6340 6339 C 176 0.00 908 reject_low 14 ALIGNMENT 215 YS2-4f04.q1k vc_7 303 53 4923 5172 C 251 95.62 908|0,1 reject_low 11 ALIGNMENT 48 YS2-4f04.q1k vc_4 238 303 1548 1612 F 66 92.42 908 reject_low 12 ALIGNMENT 0 YS2-4f04.q1k vc_4 304 311 1613 1881 F 8 0.00 908 reject_low 12 ALIGNMENT 324 YS2-4f04.p1k vc_7 1 522 13918 14444 F 522 88.70 739 reject_low 6 ALIGNMENT 0 YS2-4f05.q1k vc_4 62 615 126 125 F 554 0.00 1483 reject_low 8 ALIGNMENT 211 YS2-4f05.q1k vc_4 1007 616 5429 5812 C 392 86.73 1483 reject_low 7 ALIGNMENT 0 YS2-4f05.q1k vc_2 642 617 2106 2105 C 26 0.00 1483 reject_low 12 ALIGNMENT 0 YS2-4f05.q1k vc_5 62 615 2398 2397 F 554 0.00 1483 reject_low 6 ALIGNMENT 0 YS2-4f05.q1k vc_1 642 617 2473 2472 C 26 0.00 1483 reject_low 11 ALIGNMENT 217 YS2-4f05.q1k vc_3 616 1007 2531 2912 F 392 87.24 1483 reject_low 5 ALIGNMENT 147 YS2-4f05.q1k vc_4 616 778 6353 6514 F 163 97.55 1483|1,0 reject_low 9 ALIGNMENT 0 YS2-4f05.q1k vc_1 575 62 2513 2512 C 514 0.00 1483 reject_low 11 ALIGNMENT 39 YS2-4f05.q1k vc_5 616 578 5025 5063 C 39 100.00 1483 reject_low 14 ALIGNMENT 0 YS2-4f05.q1k vc_7 615 62 2728 2727 C 554 0.00 1483 reject_low 2 ALIGNMENT 41 YS2-4f05.q1k vc_2 616 576 2105 2145 C 41 100.00 1483 reject_low 12 ALIGNMENT 0 YS2-4f05.q1k vc_5 642 617 5026 5025 C 26 0.00 1483 reject_low 14 ALIGNMENT 0 YS2-4f05.q1k vc_3 575 62 2513 2512 C 514 0.00 1483 reject_low 13 ALIGNMENT 38 YS2-4f05.q1k vc_7 579 616 13525 13562 F 38 100.00 1483 reject_low 15 ALIGNMENT 0 YS2-4f05.p1k chr15 591 574 637012 637011 C 18 0.00 591 accept_chi 0 ALIGNMENT 41 YS2-4f05.q1k vc_1 616 576 2472 2512 C 41 100.00 1483 reject_low 11 ALIGNMENT 0 YS2-4f05.q1k vc_4 615 62 1535 1534 C 554 0.00 1483 reject_low 10 ALIGNMENT 528 YS2-4f05.p1k chr15 573 35 637011 637549 C 539 99.81 591 accept_chi 0 ALIGNMENT 147 YS2-4f05.q1k vc_4 616 778 126 287 F 163 97.55 1483 reject_low 8 ALIGNMENT 217 YS2-4f05.q1k vc_5 616 1007 2398 2779 F 392 87.24 1483 reject_low 6 ALIGNMENT 514 YS2-4f05.q1k chr15 30 575 637011 637554 F 546 98.72 1483 accept_chi 1 ALIGNMENT 41 YS2-4f05.q1k vc_4 576 616 5831 5871 F 41 100.00 1483 reject_low 9 ALIGNMENT 0 YS2-4f05.q1k vc_3 62 615 2531 2530 F 554 0.00 1483 reject_low 5 ALIGNMENT 41 YS2-4f05.q1k vc_3 616 576 2472 2512 C 41 100.00 1483 reject_low 13 ALIGNMENT 0 YS2-4f05.q1k vc_5 577 62 37 36 C 516 0.00 1483 reject_low 16 ALIGNMENT 0 YS2-4f05.q1k vc_5 577 62 5064 5063 C 516 0.00 1483 reject_low 14 ALIGNMENT 0 YS2-4f05.q1k vc_4 615 62 5813 5812 C 554 0.00 1483 reject_low 7 ALIGNMENT 0 YS2-4f05.q1k vc_4 62 575 5831 5830 F 514 0.00 1483 reject_low 9 ALIGNMENT 218 YS2-4f05.q1k vc_7 1007 616 2346 2727 C 392 87.24 1483 reject_low 2 ALIGNMENT 0 YS2-4f05.q1k vc_7 617 642 13562 13561 F 26 0.00 1483 reject_low 15 ALIGNMENT 0 YS2-4f05.q1k vc_3 642 617 2473 2472 C 26 0.00 1483 reject_low 13 ALIGNMENT 217 YS2-4f05.q1k vc_1 616 1007 2531 2912 F 392 87.24 1483 reject_low 3 ALIGNMENT 0 YS2-4f05.q1k vc_2 62 615 2164 2163 F 554 0.00 1483 reject_low 4 ALIGNMENT 0 YS2-4f05.q1k vc_1 62 615 2531 2530 F 554 0.00 1483 reject_low 3 ALIGNMENT 217 YS2-4f05.q1k vc_2 616 1007 2164 2545 F 392 87.24 1483 reject_low 4 ALIGNMENT 84 YS2-4f05.q1k vc_4 704 616 1446 1534 C 89 98.88 1483 reject_low 10 ALIGNMENT 36 YS2-4f05.q1k vc_5 613 578 1 36 C 36 100.00 1483 reject_low 16 ALIGNMENT 0 YS2-4f05.q1k chr15 576 642 637554 637553 F 67 0.00 1483 accept_chi 1 ALIGNMENT 0 YS2-4f05.q1k vc_5 642 614 2 1 C 29 0.00 1483 reject_low 16 ALIGNMENT 0 YS2-4f05.q1k vc_2 575 62 2146 2145 C 514 0.00 1483 reject_low 12 ALIGNMENT 0 YS2-4f05.q1k vc_4 617 616 5872 6353 F 0 0.00 1483 reject_low 9 ALIGNMENT 0 YS2-4f05.q1k vc_7 62 578 13525 13524 F 517 0.00 1483 reject_low 15 ALIGNMENT 221 YS2-4f06.p1k chr08 538 231 328603 328897 C 308 94.16 972 accept 0 ALIGNMENT 860 YS2-4f06.q1k chr08 35 1091 323329 324392 F 1057 94.70 1468 accept 0 ALIGNMENT 900 YS2-4f07.p1k chr14 38 1081 476213 477262 F 1044 96.74 1275 accept 0 ALIGNMENT 644 YS2-4f07.q1k chr14 1096 31 479065 480091 C 1066 89.40 1549 accept 0 ALIGNMENT 39 YS2-4f10.q1k vc_5 399 361 5025 5063 C 39 100.00 399 reject_low 6 ALIGNMENT 334 YS2-4f10.p1k chr12 29 363 462421 462755 F 335 100.00 382 reject_low 1 ALIGNMENT 0 YS2-4f10.q1k vc_3 358 62 2513 2512 C 297 0.00 399 reject_low 4 ALIGNMENT 0 YS2-4f10.q1k chr12 399 361 462422 462421 C 39 0.00 399 accept 0 ALIGNMENT 0 YS2-4f10.q1k vc_4 62 358 5831 5830 F 297 0.00 399 reject_low 5 ALIGNMENT 0 YS2-4f10.q1k vc_1 358 62 2513 2512 C 297 0.00 399 reject_low 3 ALIGNMENT 0 YS2-4f10.p1k chr12 364 382 453618 453617 F 19 0.00 382 accept 0 ALIGNMENT 41 YS2-4f10.q1k vc_4 359 399 5831 5871 F 41 100.00 399 reject_low 5 ALIGNMENT 334 YS2-4f10.p1k chr12 29 363 453284 453618 F 335 100.00 382 accept 0 ALIGNMENT 0 YS2-4f10.q1k chr12 399 361 453285 453284 C 39 0.00 399 reject_low 2 ALIGNMENT 38 YS2-4f10.q1k vc_7 362 399 13525 13562 F 38 100.00 399 reject_low 7 ALIGNMENT 0 YS2-4f10.q1k vc_5 360 62 37 36 C 299 0.00 399 reject_low 8 ALIGNMENT 36 YS2-4f10.q1k vc_5 396 361 1 36 C 36 100.00 399 reject_low 8 ALIGNMENT 41 YS2-4f10.q1k vc_1 399 359 2472 2512 C 41 100.00 399 reject_low 3 ALIGNMENT 41 YS2-4f10.q1k vc_3 399 359 2472 2512 C 41 100.00 399 reject_low 4 ALIGNMENT 0 YS2-4f10.q1k vc_7 62 361 13525 13524 F 300 0.00 399 reject_low 7 ALIGNMENT 334 YS2-4f10.q1k chr12 360 26 462421 462755 C 335 100.00 399 accept 0 ALIGNMENT 0 YS2-4f10.p1k chr12 364 382 462755 462754 F 19 0.00 382 reject_low 1 ALIGNMENT 334 YS2-4f10.q1k chr12 360 26 453284 453618 C 335 100.00 399 reject_low 2 ALIGNMENT 0 YS2-4f10.q1k vc_5 360 62 5064 5063 C 299 0.00 399 reject_low 6 ALIGNMENT 922 YS2-4f11.p1k chr08 1078 29 389636 390689 C 1050 97.24 1383 accept 0 ALIGNMENT 0 YS2-4f11.p1k chr12 62 886 657470 657469 F 825 0.00 1383 reject_low 2 ALIGNMENT 28 YS2-4f11.p1k chr12 887 950 657470 657530 F 64 85.94 1383 reject_low 2 ALIGNMENT 28 YS2-4f11.p1k chr16 949 883 436510 436573 C 67 85.07 1383 reject_low 1 ALIGNMENT 839 YS2-4f11.q1k chr08 33 937 386207 387110 F 905 99.12 1392 accept 0 ALIGNMENT 0 YS2-4f11.p1k chr16 882 62 436574 436573 C 821 0.00 1383 reject_low 1 ALIGNMENT 38 YS2-4f12.p1k chr12 897 970 657470 657543 F 74 83.78 1380 reject_low 1 ALIGNMENT 27 YS2-4f12.p1k chr10 1013 893 354957 355076 C 121 75.21 1380 reject_low 2 ALIGNMENT 832 YS2-4f12.q1k chr08 33 969 386207 387146 F 937 97.87 1365 accept 0 ALIGNMENT 0 YS2-4f12.p1k chr10 892 62 355077 355076 C 831 0.00 1380 reject_low 2 ALIGNMENT 36 YS2-4f12.p1k chr16 956 893 436510 436573 C 64 87.50 1380 reject_low 3 ALIGNMENT 936 YS2-4f12.p1k chr08 1080 38 389639 390689 C 1043 97.51 1380 accept 0 ALIGNMENT 0 YS2-4f12.p1k chr16 892 62 436574 436573 C 831 0.00 1380 reject_low 3 ALIGNMENT 0 YS2-4f12.p1k chr12 62 896 657470 657469 F 835 0.00 1380 reject_low 1 ALIGNMENT 363 YS2-4f13.q1k chr09 133 552 8777 9199 F 420 95.95 1366 reject_low 6 ALIGNMENT 350 YS2-4f13.q1k chr02 149 529 7605 7986 F 381 97.64 1366 reject_low 10 ALIGNMENT 232 YS2-4f13.q1k chr11 133 552 1795 2226 F 420 85.71 1366 reject_low 14 ALIGNMENT 0 YS2-4f13.q1k chr09 553 617 9199 9198 F 65 0.00 1366 reject_low 6 ALIGNMENT 0 YS2-4f13.q1k chr11 553 617 2226 2225 F 65 0.00 1366 reject_low 14 ALIGNMENT 212 YS2-4f13.q1k chr13 558 161 922589 922998 C 398 85.18 1366 reject_low 15 ALIGNMENT 924 YS2-4f13.p1k chr05 30 1120 59118 60214 F 1091 96.52 1389 accept 0 ALIGNMENT 0 YS2-4f13.q1k chr14 617 530 781901 781900 C 88 0.00 1366 reject_low 13 ALIGNMENT 202 YS2-4f13.q1k chr03 529 161 307779 308156 C 369 85.37 1366 reject_low 19 ALIGNMENT 0 YS2-4f13.q1k chr03 617 530 290009 290008 C 88 0.00 1366 reject_low 21 ALIGNMENT 172 YS2-4f13.q1k chr12 161 514 222701 223063 F 354 83.33 1366 reject_low 20 ALIGNMENT 0 YS2-4f13.q1k chr16 553 617 8351 8350 F 65 0.00 1366 reject_low 17 ALIGNMENT 0 YS2-4f13.q1k chr02 530 617 7986 7985 F 88 0.00 1366 reject_low 10 ALIGNMENT 0 YS2-4f13.q1k chr12 144 62 1063283 1063282 C 83 0.00 1366 reject_low 9 ALIGNMENT 0 YS2-4f13.q1k chr08 530 617 12301 12300 F 88 0.00 1366 reject_low 3 ALIGNMENT 342 YS2-4f13.q1k chr14 529 149 781900 782280 C 381 96.85 1366 reject_low 13 ALIGNMENT 0 YS2-4f13.q1k chr15 62 144 11544 11543 F 83 0.00 1366 reject_low 11 ALIGNMENT 0 YS2-4f13.q1k chr07 62 137 6279 6278 F 76 0.00 1366 reject_low 8 ALIGNMENT 0 YS2-4f13.q1k chr02 62 148 7605 7604 F 87 0.00 1366 reject_low 10 ALIGNMENT 0 YS2-4f13.q1k chr13 617 559 922590 922589 C 59 0.00 1366 reject_low 15 ALIGNMENT 200 YS2-4f13.q1k chr15 552 161 1082790 1083193 C 392 84.44 1366 reject_low 16 ALIGNMENT 0 YS2-4f13.q1k chr03 340 62 290194 290193 C 279 0.00 1366 reject_low 21 ALIGNMENT 0 YS2-4f13.q1k chr11 62 132 1795 1794 F 71 0.00 1366 reject_low 14 ALIGNMENT 0 YS2-4f13.q1k chr15 617 553 1082791 1082790 C 65 0.00 1366 reject_low 16 ALIGNMENT 0 YS2-4f13.q1k chr01 553 617 2213 2212 F 65 0.00 1366 reject_low 5 ALIGNMENT 361 YS2-4f13.q1k chr08 76 529 11852 12301 F 454 94.05 1366 reject_low 3 ALIGNMENT 369 YS2-4f13.q1k chr01 133 552 1791 2213 F 420 96.43 1366 reject_low 5 ALIGNMENT 50 YS2-4f13.q1k chr03 529 341 290008 290193 C 189 77.25 1366 reject_low 21 ALIGNMENT 0 YS2-4f13.q1k chr01 62 132 1791 1790 F 71 0.00 1366 reject_low 5 ALIGNMENT 0 YS2-4f13.q1k chr10 62 132 8760 8759 F 71 0.00 1366 reject_low 7 ALIGNMENT 0 YS2-4f13.q1k chr12 617 553 1062873 1062872 C 65 0.00 1366 reject_low 9 ALIGNMENT 346 YS2-4f13.q1k chr07 615 75 1080202 1080747 C 541 89.09 1366 reject_low 2 ALIGNMENT 0 YS2-4f13.q1k chr13 160 62 922999 922998 C 99 0.00 1366 reject_low 15 ALIGNMENT 0 YS2-4f13.q1k chr04 617 584 1523156 1523155 C 34 0.00 1366 reject_low 4 ALIGNMENT 0 YS2-4f13.q1k chr10 553 617 9182 9181 F 65 0.00 1366 reject_low 7 ALIGNMENT 363 YS2-4f13.q1k chr10 133 552 8760 9182 F 420 95.95 1366 reject_low 7 ALIGNMENT 0 YS2-4f13.q1k chr07 553 617 6696 6695 F 65 0.00 1366 reject_low 8 ALIGNMENT 352 YS2-4f13.q1k chr07 138 552 6279 6696 F 415 95.42 1366 reject_low 8 ALIGNMENT 0 YS2-4f13.q1k chr16 62 160 7948 7947 F 99 0.00 1366 reject_low 17 ALIGNMENT 333 YS2-4f13.q1k chr15 145 552 11544 11954 F 408 94.36 1366 reject_low 11 ALIGNMENT 0 YS2-4f13.q1k chr15 553 617 11954 11953 F 65 0.00 1366 reject_low 11 ALIGNMENT 367 YS2-4f13.q1k chr04 583 133 1523155 1523610 C 451 94.24 1366 reject_low 4 ALIGNMENT 0 YS2-4f13.q1k chr04 132 62 1523611 1523610 C 71 0.00 1366 reject_low 4 ALIGNMENT 200 YS2-4f13.q1k chr16 161 552 7948 8351 F 392 84.44 1366 reject_low 17 ALIGNMENT 0 YS2-4f13.q1k chr12 62 148 13083 13082 F 87 0.00 1366 reject_low 12 ALIGNMENT 0 YS2-4f13.q1k chr12 62 160 222701 222700 F 99 0.00 1366 reject_low 20 ALIGNMENT 0 YS2-4f13.q1k chr15 160 62 1083194 1083193 C 99 0.00 1366 reject_low 16 ALIGNMENT 0 YS2-4f13.q1k chr14 148 62 782281 782280 C 87 0.00 1366 reject_low 13 ALIGNMENT 202 YS2-4f13.q1k chr01 147 521 176651 177031 F 375 85.07 1366 reject_low 18 ALIGNMENT 0 YS2-4f13.q1k chr01 522 617 177031 177030 F 96 0.00 1366 reject_low 18 ALIGNMENT 332 YS2-4f13.q1k chr02 615 57 808941 809504 C 559 87.66 1366 reject_low 1 ALIGNMENT 342 YS2-4f13.q1k chr12 149 529 13083 13463 F 381 96.85 1366 reject_low 12 ALIGNMENT 0 YS2-4f13.q1k chr01 62 146 176651 176650 F 85 0.00 1366 reject_low 18 ALIGNMENT 754 YS2-4f13.q1k chr05 998 1 63242 64237 C 998 92.89 1366 accept 0 ALIGNMENT 0 YS2-4f13.q1k chr12 530 617 13463 13462 F 88 0.00 1366 reject_low 12 ALIGNMENT 0 YS2-4f13.q1k chr12 515 617 223063 223062 F 103 0.00 1366 reject_low 20 ALIGNMENT 0 YS2-4f13.q1k chr03 617 530 307780 307779 C 88 0.00 1366 reject_low 19 ALIGNMENT 0 YS2-4f13.q1k chr09 62 132 8777 8776 F 71 0.00 1366 reject_low 6 ALIGNMENT 0 YS2-4f13.q1k chr03 160 62 308157 308156 C 99 0.00 1366 reject_low 19 ALIGNMENT 342 YS2-4f13.q1k chr12 552 145 1062872 1063282 C 408 95.10 1366 reject_low 9 ALIGNMENT 0 YS2-4f14.p1k vc_7 62 984 100 99 F 923 0.00 1355 reject_low 3 ALIGNMENT 848 YS2-4f14.p1k chr10 30 966 207071 208016 F 937 97.44 1355 accept 0 ALIGNMENT 742 YS2-4f14.q1k chr10 885 30 207154 208016 C 856 96.73 1558 accept 0 ALIGNMENT 0 YS2-4f14.p1k vc_5 984 62 5026 5025 C 923 0.00 1355 reject_low 2 ALIGNMENT 0 YS2-4f14.p1k vc_7 62 984 13562 13561 F 923 0.00 1355 reject_low 4 ALIGNMENT 79 YS2-4f14.p1k vc_7 985 1140 100 269 F 156 86.54 1355 reject_low 3 ALIGNMENT 79 YS2-4f14.p1k vc_7 985 1140 13562 13731 F 156 86.54 1355 reject_low 4 ALIGNMENT 79 YS2-4f14.p1k vc_5 1140 985 4856 5025 C 156 86.54 1355 reject_low 2 ALIGNMENT 79 YS2-4f14.p1k vc_4 985 1140 5871 6040 F 156 86.54 1355 reject_low 1 ALIGNMENT 0 YS2-4f14.p1k vc_4 62 984 5871 5870 F 923 0.00 1355 reject_low 1 ALIGNMENT 953 YS2-4f15.q1k chr04 1210 33 270241 271422 C 1178 95.16 1467 accept 0 ALIGNMENT 601 YS2-4f15.p1k chr04 89 945 267340 268202 F 857 93.00 1113 accept 0 ALIGNMENT 724 YS2-4f17.q1k chr15 36 882 1027298 1028138 F 847 96.93 1577 accept 0 ALIGNMENT 779 YS2-4f17.p1k chr15 1046 32 1031058 1032099 C 1015 93.69 1173 accept 0 ALIGNMENT 968 YS2-4f19.p1k chr04 1123 31 406004 407111 C 1093 96.98 1328 accept 0 ALIGNMENT 776 YS2-4f19.q1k chr04 7 962 401608 402569 F 956 94.98 1343 accept 0 ALIGNMENT 911 YS2-4f22.q1k chr03 35 1188 170626 171777 F 1154 94.19 1396 accept 0 ALIGNMENT 791 YS2-4f22.p1k chr03 1036 41 175234 176232 C 996 95.08 1232 accept 0 ALIGNMENT 904 YS2-4f23.p1k chr02 1107 29 330690 331764 C 1079 95.83 1324 accept_chi 1 ALIGNMENT 946 YS2-4f23.q1k chr16 28 1192 109382 110545 F 1165 94.68 1312 accept_chi 0 ALIGNMENT 696 YS2-4f24.q1k chr04 792 24 98535 99297 C 769 98.18 1443 accept_chi 1 ALIGNMENT 1003 YS2-4f24.p1k chr04 1197 30 98115 99297 C 1168 96.58 1248 accept_chi 0 ALIGNMENT 644 YS2-4g02.q1k chr15 38 890 274959 275802 F 853 93.32 1473 accept 0 ALIGNMENT 1043 YS2-4g02.p1k chr15 1169 30 275078 276220 C 1140 97.89 1382 accept 0 ALIGNMENT 580 YS2-4g03.q1k chr11 883 39 334156 335001 C 845 91.24 1391 accept 0 ALIGNMENT 994 YS2-4g03.p1k chr11 29 1221 330753 331952 F 1193 96.31 1368 accept 0 ALIGNMENT 1026 YS2-4g04.p1k chr03 29 1191 183860 185031 F 1163 97.08 1376 accept 0 ALIGNMENT 623 YS2-4g04.q1k chr03 836 34 184533 185322 C 803 94.27 1524 accept 0 ALIGNMENT 763 YS2-4g05.p1k chr14 862 30 525247 526086 C 833 97.96 863 accept_chi 0 ALIGNMENT 447 YS2-4g05.q1k chr14 30 719 525247 525937 F 690 89.42 1542 accept_chi 1 ALIGNMENT 908 YS2-4g06.p1k chr15 1008 28 416559 417549 C 981 98.78 1514 accept 0 ALIGNMENT 22 YS2-4g07.p1k chr08 574 531 288679 288722 C 44 86.36 1361 reject_low 3 ALIGNMENT 254 YS2-4g07.p1k chr04 1033 633 1164078 1164482 C 401 89.53 1361 reject_low 2 ALIGNMENT 220 YS2-4g07.q1k chr02 387 693 226624 226927 F 307 93.81 1348 reject_low 9 ALIGNMENT 0 YS2-4g07.q1k chr16 62 386 560478 560477 F 325 0.00 1348 reject_low 20 ALIGNMENT 0 YS2-4g07.q1k chr07 62 386 535764 535763 F 325 0.00 1348 reject_low 22 ALIGNMENT 0 YS2-4g07.p1k chr04 632 62 1164483 1164482 C 571 0.00 1361 reject_low 2 ALIGNMENT 211 YS2-4g07.q1k chr16 387 693 560478 560781 F 307 92.83 1348 reject_low 20 ALIGNMENT 0 YS2-4g07.q1k chr04 386 62 878040 878039 C 325 0.00 1348 reject_low 24 ALIGNMENT 185 YS2-4g07.q1k chr04 649 387 877779 878039 C 263 93.54 1348 reject_low 24 ALIGNMENT 0 YS2-4g07.p1k chr08 605 575 288645 288678 C 31 0.00 1361 reject_low 3 ALIGNMENT 219 YS2-4g07.q1k chr13 386 693 184169 184473 F 308 93.51 1348 reject_low 16 ALIGNMENT 0 YS2-4g07.p1k chr08 675 62 292407 292406 C 614 0.00 1361 reject_low 4 ALIGNMENT 220 YS2-4g07.q1k chr13 693 387 362614 362917 C 307 93.81 1348 reject_low 14 ALIGNMENT 43 YS2-4g07.q1k chr15 531 634 594656 594757 F 104 85.58 1348 reject_low 28 ALIGNMENT 0 YS2-4g07.p1k chr08 530 62 288723 288722 C 469 0.00 1361 reject_low 3 ALIGNMENT 216 YS2-4g07.q1k chr08 693 385 116444 116749 C 309 93.20 1348 reject_low 17 ALIGNMENT 214 YS2-4g07.q1k chr03 382 693 151513 151820 F 312 92.95 1348 reject_low 7 ALIGNMENT 220 YS2-4g07.q1k chr13 693 387 357032 357335 C 307 93.81 1348 reject_low 13 ALIGNMENT 0 YS2-4g07.q1k chr07 386 62 817730 817729 C 325 0.00 1348 reject_low 11 ALIGNMENT 0 YS2-4g07.q1k chr15 62 386 594821 594820 F 325 0.00 1348 reject_low 15 ALIGNMENT 217 YS2-4g07.q1k chr14 693 387 102220 102523 C 307 93.49 1348 reject_low 18 ALIGNMENT 596 YS2-4g07.q1k chr04 2 848 1150648 1151482 F 847 93.15 1348 accept 0 ALIGNMENT 169 YS2-4g07.q1k chr03 663 387 142803 143077 C 277 90.61 1348 reject_low 25 ALIGNMENT 0 YS2-4g07.p1k chr13 62 663 288261 288260 F 602 0.00 1361 reject_low 5 ALIGNMENT 214 YS2-4g07.q1k chr02 383 693 221036 221345 F 311 92.93 1348 reject_low 8 ALIGNMENT 144 YS2-4g07.p1k chr08 1021 676 292059 292406 C 346 81.79 1361 reject_low 4 ALIGNMENT 198 YS2-4g07.q1k chr07 387 693 535764 536073 F 307 91.53 1348 reject_low 22 ALIGNMENT 0 YS2-4g07.q1k chr13 62 385 184169 184168 F 324 0.00 1348 reject_low 16 ALIGNMENT 0 YS2-4g07.q1k chr03 385 62 124464 124463 C 324 0.00 1348 reject_low 21 ALIGNMENT 0 YS2-4g07.q1k chr08 386 62 549638 549637 C 325 0.00 1348 reject_low 19 ALIGNMENT 577 YS2-4g07.p1k chr04 1111 357 1160643 1161409 C 755 93.38 1361 reject_low 1 ALIGNMENT 210 YS2-4g07.q1k chr03 693 386 124159 124463 C 308 92.53 1348 reject_low 21 ALIGNMENT 97 YS2-4g07.p1k chr13 664 1007 288261 288604 F 344 78.20 1361 reject_low 5 ALIGNMENT 0 YS2-4g07.q1k chr01 386 62 160576 160575 C 325 0.00 1348 reject_low 26 ALIGNMENT 0 YS2-4g07.q1k chr13 386 62 357336 357335 C 325 0.00 1348 reject_low 13 ALIGNMENT 0 YS2-4g07.q1k chr13 386 62 373034 373033 C 325 0.00 1348 reject_low 23 ALIGNMENT 0 YS2-4g07.q1k chr01 386 62 166164 166163 C 325 0.00 1348 reject_low 27 ALIGNMENT 0 YS2-4g07.q1k chr03 62 381 151513 151512 F 320 0.00 1348 reject_low 7 ALIGNMENT 220 YS2-4g07.q1k chr11 693 387 517123 517426 C 307 93.81 1348 reject_low 12 ALIGNMENT 195 YS2-4g07.q1k chr13 693 387 372724 373033 C 307 91.21 1348 reject_low 23 ALIGNMENT 0 YS2-4g07.q1k chr11 385 62 458116 458115 C 324 0.00 1348 reject_low 6 ALIGNMENT 0 YS2-4g07.q1k chr03 386 62 143078 143077 C 325 0.00 1348 reject_low 25 ALIGNMENT 0 YS2-4g07.q1k chr13 386 62 362918 362917 C 325 0.00 1348 reject_low 14 ALIGNMENT 0 YS2-4g07.q1k chr08 384 62 116750 116749 C 323 0.00 1348 reject_low 17 ALIGNMENT 220 YS2-4g07.q1k chr07 387 693 535215 535518 F 307 93.81 1348 reject_low 10 ALIGNMENT 220 YS2-4g07.q1k chr15 387 693 594821 595124 F 307 93.81 1348 reject_low 15 ALIGNMENT 0 YS2-4g07.q1k chr07 62 386 535215 535214 F 325 0.00 1348 reject_low 10 ALIGNMENT 139 YS2-4g07.q1k chr01 693 387 160267 160575 C 307 85.02 1348 reject_low 26 ALIGNMENT 0 YS2-4g07.q1k chr02 62 386 226624 226623 F 325 0.00 1348 reject_low 9 ALIGNMENT 214 YS2-4g07.q1k chr08 693 387 549334 549637 C 307 93.16 1348 reject_low 19 ALIGNMENT 139 YS2-4g07.q1k chr01 693 387 165855 166163 C 307 85.02 1348 reject_low 27 ALIGNMENT 0 YS2-4g07.q1k chr02 62 382 221036 221035 F 321 0.00 1348 reject_low 8 ALIGNMENT 0 YS2-4g07.q1k chr11 386 62 517427 517426 C 325 0.00 1348 reject_low 12 ALIGNMENT 226 YS2-4g07.p1k chr08 1041 606 288205 288644 C 436 85.09 1361 reject_low 3 ALIGNMENT 898 YS2-4g07.p1k chr04 1111 25 1155251 1156350 C 1087 95.40 1361 accept 0 ALIGNMENT 0 YS2-4g07.q1k chr14 386 62 102524 102523 C 325 0.00 1348 reject_low 18 ALIGNMENT 220 YS2-4g07.q1k chr07 693 387 817426 817729 C 307 93.81 1348 reject_low 11 ALIGNMENT 0 YS2-4g07.q1k chr15 62 530 594656 594655 F 469 0.00 1348 reject_low 28 ALIGNMENT 209 YS2-4g07.q1k chr11 698 386 457807 458115 C 313 92.33 1348 reject_low 6 ALIGNMENT 0 YS2-4g07.p1k chr04 356 62 1161410 1161409 C 295 0.00 1361 reject_low 1 ALIGNMENT 1014 YS2-4g08.p1k chr09 28 1149 274821 275957 F 1122 97.42 1408 accept 0 ALIGNMENT 513 YS2-4g08.q1k chr09 734 26 276895 277598 C 709 91.96 1482 accept 0 ALIGNMENT 199 YS2-4g09.p1k chr06 244 33 94170 94383 C 212 98.58 263 accept 0 ALIGNMENT 0 YS2-4g09.p1k chr06 263 245 94171 94170 C 19 0.00 263 accept 0 ALIGNMENT 240 YS2-4g11.p1k chr12 29 299 32295 32567 F 271 98.15 306 accept 0 ALIGNMENT 0 YS2-4g12.p1k chr12 814 760 306766 306819 C 55 0.00 1479 reject_bad_break 0 ALIGNMENT 21 YS2-4g12.p1k chr12 851 815 306731 306765 C 37 89.19 1479 reject_bad_break 0 ALIGNMENT 279 YS2-4g12.p1k chr12 759 44 306820 307528 C 716 80.73 1479 reject_bad_break 0 ALIGNMENT 463 YS2-4g13.p1k vc_7 1 642 456 1118 F 642 92.06 761 reject_vc 5 ALIGNMENT 0 YS2-4g13.p1k vc_2 547 62 8800 8799 C 486 0.00 761 reject_low 8 ALIGNMENT 469 YS2-4g13.p1k vc_6 1 590 3712 4314 F 590 94.24 761 reject_vc 4 ALIGNMENT 472 YS2-4g13.p1k vc_5 649 1 3999 4669 C 649 92.30 761 reject_vc 0 ALIGNMENT 469 YS2-4g13.p1k vc_1 649 1 1079 1749 C 649 92.14 761 reject_vc 1 ALIGNMENT 24 YS2-4g13.p1k vc_2 649 548 8686 8799 C 102 79.41 761 reject_low 8 ALIGNMENT 469 YS2-4g13.p1k vc_3 649 1 1079 1749 C 649 92.14 761 reject_vc 3 ALIGNMENT 463 YS2-4g13.p1k vc_7 1 642 13918 14580 F 642 92.06 761 reject_vc 6 ALIGNMENT 469 YS2-4g13.p1k vc_2 649 1 1079 1749 C 649 92.14 761 reject_vc 2 ALIGNMENT 24 YS2-4g13.p1k vc_1 649 548 9053 9166 C 102 79.41 761 reject_low 7 ALIGNMENT 0 YS2-4g13.p1k vc_3 547 62 8438 8437 C 486 0.00 761 reject_low 9 ALIGNMENT 0 YS2-4g13.p1k vc_1 547 62 9167 9166 C 486 0.00 761 reject_low 7 ALIGNMENT 24 YS2-4g13.p1k vc_3 649 548 8324 8437 C 102 79.41 761 reject_low 9 ALIGNMENT 524 YS2-4g14.q1k chr12 813 28 533007 533781 C 786 91.22 1436 accept 0 ALIGNMENT 1039 YS2-4g14.p1k chr12 35 1239 532569 533777 F 1205 96.60 1450 accept 0 ALIGNMENT 0 YS2-4g16.q1k chr09 62 119 431615 431614 F 58 0.00 1485 reject_low 1 ALIGNMENT 255 YS2-4g16.p1k chr09 1017 492 432040 432557 C 526 85.17 1371 reject_low 1 ALIGNMENT 0 YS2-4g16.p1k chr09 491 62 432558 432557 C 430 0.00 1371 reject_low 1 ALIGNMENT 0 YS2-4g16.q1k chr07 299 300 8633 8781 C 0 0.00 1485 accept 0 ALIGNMENT 0 YS2-4g16.q1k chr09 300 299 431796 431944 F 0 0.00 1485 reject_low 1 ALIGNMENT 253 YS2-4g16.q1k chr07 300 27 8781 9054 C 274 98.54 1485|1,0 accept 0 ALIGNMENT 108 YS2-4g16.q1k chr09 120 300 431615 431796 F 181 87.29 1485|0,1 reject_low 1 ALIGNMENT 174 YS2-4g16.q1k chr09 299 704 431944 432345 F 406 83.74 1485|1,0 reject_low 1 ALIGNMENT 212 YS2-4g16.q1k chr07 837 299 8103 8633 C 539 82.19 1485|0,1 accept 0 ALIGNMENT 0 YS2-4g16.p1k chr07 62 491 8019 8018 F 430 0.00 1371 accept 0 ALIGNMENT 256 YS2-4g16.p1k chr07 492 1017 8019 8537 F 526 85.17 1371 accept 0 ALIGNMENT 1002 YS2-4g17.p1k chr04 30 1245 1144141 1145371 F 1216 96.13 1347 accept 0 ALIGNMENT 612 YS2-4g18.p1k chr14 68 755 349322 350007 F 688 97.53 1211 accept 0 ALIGNMENT 999 YS2-4g19.p1k chr13 1229 35 736365 737573 C 1195 96.15 1326 accept 0 ALIGNMENT 661 YS2-4g19.q1k chr13 29 870 732775 733609 F 842 94.77 1421 accept 0 ALIGNMENT 0 YS2-4g19.q1k chr15 62 125 867582 867581 F 64 0.00 1421 reject_low 1 ALIGNMENT 0 YS2-4g19.q1k chr15 395 578 867850 867849 F 184 0.00 1421 reject_low 1 ALIGNMENT 215 YS2-4g19.q1k chr15 126 394 867582 867850 F 269 94.05 1421 reject_low 1 ALIGNMENT 923 YS2-4g20.q1k chr16 37 1142 544363 545477 F 1106 95.48 1366 accept_chi 0 ALIGNMENT 919 YS2-4g20.p1k chr16 38 1101 544362 545423 F 1064 96.05 1304 accept_chi 1 ALIGNMENT 949 YS2-4g21.q1k chr05 1130 13 315577 316693 C 1118 96.69 1312 accept 0 ALIGNMENT 781 YS2-4g22.q1k chr14 1016 41 373705 374677 C 976 94.88 1385 accept 0 ALIGNMENT 963 YS2-4g22.p1k chr14 27 1179 369440 370600 F 1153 95.58 1298 accept 0 ALIGNMENT 0 YS2-4g23.q1k vc_7 53 54 5172 6360 C 0 0.00 818 reject_vc 7 ALIGNMENT 219 YS2-4g23.q1k vc_3 1 282 2689 2968 F 282 93.26 818 reject_vc 6 ALIGNMENT 51 YS2-4g23.q1k vc_7 54 3 6360 6411 C 52 100.00 818|1,0 reject_vc 7 ALIGNMENT 165 YS2-4g23.q1k vc_7 282 53 4945 5172 C 230 91.30 818|0,1 reject_vc 7 ALIGNMENT 0 YS2-4g23.p1k chr02 378 396 679266 679265 F 19 0.00 396 accept 0 ALIGNMENT 216 YS2-4g23.q1k vc_4 373 1 5294 5654 C 373 89.01 818 reject_vc 3 ALIGNMENT 223 YS2-4g23.q1k vc_7 373 1 2211 2569 C 373 89.54 818 reject_vc 2 ALIGNMENT 223 YS2-4g23.q1k vc_5 1 373 2556 2914 F 373 89.54 818 reject_vc 1 ALIGNMENT 219 YS2-4g23.q1k vc_2 1 282 2322 2601 F 282 93.26 818 reject_vc 5 ALIGNMENT 321 YS2-4g23.p1k chr02 37 377 678925 679266 F 341 98.53 396 accept 0 ALIGNMENT 219 YS2-4g23.q1k vc_1 1 282 2689 2968 F 282 93.26 818 reject_vc 4 ALIGNMENT 41 YS2-4h01.q1k vc_4 575 615 5831 5871 F 41 100.00 1366 reject_low 8 ALIGNMENT 0 YS2-4h01.q1k vc_2 665 616 2106 2105 C 50 0.00 1366 reject_low 11 ALIGNMENT 0 YS2-4h01.q1k vc_4 614 62 1535 1534 C 553 0.00 1366 reject_low 18 ALIGNMENT 211 YS2-4h01.q1k vc_4 1047 615 5385 5812 C 433 85.45 1366 reject_low 7 ALIGNMENT 0 YS2-4h01.q1k vc_5 665 616 5026 5025 C 50 0.00 1366 reject_low 13 ALIGNMENT 0 YS2-4h01.q1k vc_4 62 614 126 125 F 553 0.00 1366 reject_low 9 ALIGNMENT 0 YS2-4h01.p1k chr04 645 663 1339603 1339602 F 19 0.00 663 accept_chi 0 ALIGNMENT 41 YS2-4h01.q1k vc_1 615 575 2472 2512 C 41 100.00 1366 reject_low 10 ALIGNMENT 527 YS2-4h01.q1k chr04 574 4 1338994 1339562 C 571 99.47 1366 accept_chi 1 ALIGNMENT 0 YS2-4h01.q1k vc_7 614 62 2728 2727 C 553 0.00 1366 reject_low 6 ALIGNMENT 36 YS2-4h01.q1k vc_5 612 577 1 36 C 36 100.00 1366 reject_low 15 ALIGNMENT 0 YS2-4h01.q1k vc_4 616 615 5872 6353 F 0 0.00 1366 reject_low 8 ALIGNMENT 0 YS2-4h01.q1k vc_1 574 62 2513 2512 C 513 0.00 1366 reject_low 10 ALIGNMENT 75 YS2-4h01.q1k vc_4 706 615 1446 1534 C 92 96.74 1366 reject_low 18 ALIGNMENT 124 YS2-4h01.q1k vc_4 615 782 6353 6514 F 168 94.05 1366|1,0 reject_low 8 ALIGNMENT 0 YS2-4h01.q1k vc_4 1021 707 108 1445 C 315 0.00 1366 reject_low 18 ALIGNMENT 218 YS2-4h01.q1k vc_5 615 1047 2398 2823 F 433 85.91 1366 reject_low 5 ALIGNMENT 0 YS2-4h01.q1k vc_4 1021 62 6335 6334 C 960 0.00 1366 reject_low 16 ALIGNMENT 0 YS2-4h01.q1k vc_7 832 833 5172 6360 C 0 0.00 1366 reject_low 17 ALIGNMENT 218 YS2-4h01.q1k vc_3 615 1047 2531 2956 F 433 85.91 1366 reject_low 4 ALIGNMENT 578 YS2-4h01.p1k chr04 35 644 1338994 1339603 F 610 100.00 663 accept_chi 0 ALIGNMENT 38 YS2-4h01.q1k vc_7 578 615 13525 13562 F 38 100.00 1366 reject_low 14 ALIGNMENT 0 YS2-4h01.q1k vc_3 62 614 2531 2530 F 553 0.00 1366 reject_low 4 ALIGNMENT 0 YS2-4h01.q1k vc_5 62 614 2398 2397 F 553 0.00 1366 reject_low 5 ALIGNMENT 0 YS2-4h01.q1k vc_2 574 62 2146 2145 C 513 0.00 1366 reject_low 11 ALIGNMENT 124 YS2-4h01.q1k vc_4 615 782 126 287 F 168 94.05 1366 reject_low 9 ALIGNMENT 0 YS2-4h01.q1k vc_1 62 614 2531 2530 F 553 0.00 1366 reject_low 2 ALIGNMENT 0 YS2-4h01.q1k chr04 665 575 1338995 1338994 C 91 0.00 1366 accept_chi 1 ALIGNMENT 0 YS2-4h01.q1k vc_3 665 616 2473 2472 C 50 0.00 1366 reject_low 12 ALIGNMENT 0 YS2-4h01.q1k vc_1 665 616 2473 2472 C 50 0.00 1366 reject_low 10 ALIGNMENT 0 YS2-4h01.q1k vc_4 783 1021 288 1552 F 239 0.00 1366 reject_low 9 ALIGNMENT 0 YS2-4h01.q1k vc_7 783 62 6409 6408 C 722 0.00 1366 reject_low 17 ALIGNMENT 0 YS2-4h01.q1k vc_7 62 577 13525 13524 F 516 0.00 1366 reject_low 14 ALIGNMENT 0 YS2-4h01.q1k vc_4 62 574 5831 5830 F 513 0.00 1366 reject_low 8 ALIGNMENT 218 YS2-4h01.q1k vc_1 615 1047 2531 2956 F 433 85.91 1366 reject_low 2 ALIGNMENT 41 YS2-4h01.q1k vc_3 615 575 2472 2512 C 41 100.00 1366 reject_low 12 ALIGNMENT 0 YS2-4h01.q1k vc_5 665 613 2 1 C 53 0.00 1366 reject_low 15 ALIGNMENT 36 YS2-4h01.q1k vc_7 833 784 6360 6408 C 50 94.00 1366|1,0 reject_low 17 ALIGNMENT 41 YS2-4h01.q1k vc_2 615 575 2105 2145 C 41 100.00 1366 reject_low 11 ALIGNMENT 39 YS2-4h01.q1k vc_5 615 577 5025 5063 C 39 100.00 1366 reject_low 13 ALIGNMENT 0 YS2-4h01.q1k vc_5 576 62 5064 5063 C 515 0.00 1366 reject_low 13 ALIGNMENT 216 YS2-4h01.q1k vc_7 1038 615 2311 2727 C 424 86.08 1366 reject_low 6 ALIGNMENT 20 YS2-4h01.q1k vc_4 1047 1022 6309 6334 C 26 92.31 1366 reject_low 16 ALIGNMENT 0 YS2-4h01.q1k vc_7 616 665 13562 13561 F 50 0.00 1366 reject_low 14 ALIGNMENT 0 YS2-4h01.q1k vc_2 62 614 2164 2163 F 553 0.00 1366 reject_low 3 ALIGNMENT 20 YS2-4h01.q1k vc_4 1022 1047 1553 1578 F 26 92.31 1366 reject_low 9 ALIGNMENT 0 YS2-4h01.q1k vc_3 574 62 2513 2512 C 513 0.00 1366 reject_low 12 ALIGNMENT 0 YS2-4h01.q1k vc_5 576 62 37 36 C 515 0.00 1366 reject_low 15 ALIGNMENT 218 YS2-4h01.q1k vc_2 615 1047 2164 2589 F 433 85.91 1366 reject_low 3 ALIGNMENT 20 YS2-4h01.q1k vc_4 1047 1022 82 107 C 26 92.31 1366 reject_low 18 ALIGNMENT 0 YS2-4h01.q1k vc_4 614 62 5813 5812 C 553 0.00 1366 reject_low 7 ALIGNMENT 59 YS2-4h01.q1k vc_7 1047 832 4957 5172 C 216 77.78 1366|0,1 reject_low 17 ALIGNMENT 94 YS2-4h02.p1k chr06 219 326 31622 31729 F 108 98.15 1227 reject_low 2 ALIGNMENT 867 YS2-4h02.q1k chr12 30 1037 463175 464179 F 1008 96.13 1505 accept 1 ALIGNMENT 0 YS2-4h02.p1k chr06 327 652 31729 31728 F 326 0.00 1227 reject_low 2 ALIGNMENT 664 YS2-4h02.p1k chr12 903 77 458715 459557 C 827 95.53 1227 accept 0 ALIGNMENT 664 YS2-4h02.p1k chr12 903 77 467852 468694 C 827 95.53 1227 accept 1 ALIGNMENT 867 YS2-4h02.q1k chr12 30 1037 454038 455042 F 1008 96.13 1505 accept 0 ALIGNMENT 0 YS2-4h02.p1k chr06 107 218 31622 31621 F 112 0.00 1227 reject_low 2 ALIGNMENT 897 YS2-4h03.p1k chr14 29 1069 637171 638230 F 1041 96.45 1335 accept 0 ALIGNMENT 822 YS2-4h03.q1k chr14 1053 29 639850 640878 C 1025 94.63 1444 accept 0 ALIGNMENT 935 YS2-4h04.p1k chr11 29 1121 16489 17587 F 1093 96.43 1355 accept 0 ALIGNMENT 606 YS2-4h04.q1k chr11 883 1 19765 20640 C 883 91.62 1370 accept 0 ALIGNMENT 761 YS2-4h05.q1k chr09 31 1008 93127 94090 F 978 93.76 1442 accept 0 ALIGNMENT 914 YS2-4h05.p1k chr09 1095 31 95085 96160 C 1065 95.68 1415 accept 0 ALIGNMENT 806 YS2-4h06.p1k chr06 985 25 199760 200734 C 961 96.57 1331 accept 0 ALIGNMENT 105 YS2-4h06.q1k chr06 26 157 199214 199345 F 132 95.45 1438|0,7 accept 0 ALIGNMENT 637 YS2-4h06.q1k chr06 144 990 199362 200220 F 847 93.74 1438|7,0 accept 0 ALIGNMENT 0 YS2-4h06.q1k chr06 151 150 199339 199368 F 0 0.00 1438 accept 0 ALIGNMENT 186 YS2-4h07.q1k vc_2 2 288 2322 2603 F 287 89.90 1101 reject_vc 2 ALIGNMENT 0 YS2-4h07.p1k chr16 310 328 118999 118998 F 19 0.00 328 accept 0 ALIGNMENT 186 YS2-4h07.q1k vc_3 2 288 2689 2970 F 287 89.90 1101 reject_vc 3 ALIGNMENT 268 YS2-4h07.p1k chr16 28 309 118718 118999 F 282 100.00 328 accept 0 ALIGNMENT 51 YS2-4h07.q1k vc_7 55 4 6360 6411 C 52 100.00 1101|1,0 reject_vc 7 ALIGNMENT 0 YS2-4h07.q1k vc_7 54 55 5172 6360 C 0 0.00 1101 reject_vc 7 ALIGNMENT 179 YS2-4h07.q1k vc_4 288 2 5371 5654 C 287 89.20 1101 reject_vc 6 ALIGNMENT 186 YS2-4h07.q1k vc_1 2 288 2689 2970 F 287 89.90 1101 reject_vc 1 ALIGNMENT 186 YS2-4h07.q1k vc_7 288 2 2288 2569 C 287 89.90 1101 reject_vc 5 ALIGNMENT 186 YS2-4h07.q1k vc_5 2 288 2556 2837 F 287 89.90 1101 reject_vc 4 ALIGNMENT 132 YS2-4h07.q1k vc_7 288 54 4943 5172 C 235 87.23 1101|0,1 reject_vc 7 ALIGNMENT 252 YS2-4h08.q1k vc_5 2 408 2556 2964 F 407 88.70 805 reject_vc 1 ALIGNMENT 223 YS2-4h08.q1k vc_3 2 281 2689 2968 F 280 94.29 805 reject_vc 6 ALIGNMENT 168 YS2-4h08.q1k vc_7 281 54 4945 5172 C 228 92.54 805|0,1 reject_vc 7 ALIGNMENT 249 YS2-4h08.q1k vc_7 391 2 2179 2569 C 390 89.23 805 reject_vc 3 ALIGNMENT 346 YS2-4h08.p1k chr04 32 391 479653 480012 F 360 99.44 409 accept 0 ALIGNMENT 51 YS2-4h08.q1k vc_7 55 4 6360 6411 C 52 100.00 805|1,0 reject_vc 7 ALIGNMENT 245 YS2-4h08.q1k vc_4 408 2 5244 5654 C 407 88.21 805 reject_vc 2 ALIGNMENT 223 YS2-4h08.q1k vc_2 2 281 2322 2601 F 280 94.29 805 reject_vc 5 ALIGNMENT 0 YS2-4h08.q1k vc_7 54 55 5172 6360 C 0 0.00 805 reject_vc 7 ALIGNMENT 223 YS2-4h08.q1k vc_1 2 281 2689 2968 F 280 94.29 805 reject_vc 4 ALIGNMENT 0 YS2-4h08.p1k chr04 392 409 480012 480011 F 18 0.00 409 accept 0 ALIGNMENT 215 YS2-4h09.q1k vc_3 1 309 2689 2993 F 309 91.26 956 reject_vc 5 ALIGNMENT 216 YS2-4h09.q1k vc_7 371 1 2203 2569 C 371 87.60 956 reject_vc 1 ALIGNMENT 36 YS2-4h09.q1k vc_4 307 242 47 112 C 66 87.88 956 reject_low 7 ALIGNMENT 215 YS2-4h09.q1k vc_1 1 309 2689 2993 F 309 91.26 956 reject_vc 3 ALIGNMENT 216 YS2-4h09.q1k vc_5 1 371 2556 2922 F 371 87.60 956 reject_vc 0 ALIGNMENT 0 YS2-4h09.q1k vc_7 53 54 5172 6360 C 0 0.00 956 reject_low 6 ALIGNMENT 215 YS2-4h09.q1k vc_2 1 309 2322 2626 F 309 91.26 956 reject_vc 4 ALIGNMENT 162 YS2-4h09.q1k vc_7 307 53 4922 5172 C 255 89.41 956|0,1 reject_low 6 ALIGNMENT 47 YS2-4h09.q1k vc_7 54 3 6360 6411 C 52 98.08 956|1,0 reject_low 6 ALIGNMENT 209 YS2-4h09.q1k vc_4 371 1 5286 5654 C 371 87.06 956 reject_vc 2 ALIGNMENT 36 YS2-4h09.q1k vc_4 242 307 1548 1613 F 66 87.88 956 reject_low 8 ALIGNMENT 36 YS2-4h09.q1k vc_4 307 242 6274 6339 C 66 87.88 956 reject_low 9 ALIGNMENT 0 YS2-4h10.q1k chr03 289 338 247309 247308 F 50 0.00 1456 accept_chi 1 ALIGNMENT 212 YS2-4h10.q1k vc_4 722 329 5428 5812 C 394 87.31 1456 reject_low 7 ALIGNMENT 0 YS2-4h10.q1k vc_2 122 328 2164 2163 F 207 0.00 1456 reject_low 3 ALIGNMENT 0 YS2-4h10.q1k vc_7 122 291 13525 13524 F 170 0.00 1456 reject_low 16 ALIGNMENT 0 YS2-4h10.q1k vc_4 122 328 126 125 F 207 0.00 1456 reject_low 8 ALIGNMENT 38 YS2-4h10.q1k vc_7 292 329 63 100 F 38 100.00 1456 reject_low 15 ALIGNMENT 0 YS2-4h10.q1k vc_4 122 287 5830 5829 F 166 0.00 1456 reject_low 9 ALIGNMENT 219 YS2-4h10.q1k vc_7 722 329 2345 2727 C 394 87.82 1456 reject_low 6 ALIGNMENT 0 YS2-4h10.q1k vc_1 287 122 2514 2513 C 166 0.00 1456 reject_low 11 ALIGNMENT 36 YS2-4h10.q1k vc_5 326 291 1 36 C 36 100.00 1456 reject_low 17 ALIGNMENT 136 YS2-4h10.q1k vc_4 329 491 126 287 F 163 95.71 1456 reject_low 8 ALIGNMENT 42 YS2-4h10.q1k vc_4 288 329 5830 5871 F 42 100.00 1456 reject_low 9 ALIGNMENT 0 YS2-4h10.q1k vc_3 287 122 2514 2513 C 166 0.00 1456 reject_low 13 ALIGNMENT 80 YS2-4h10.q1k vc_4 413 329 1450 1534 C 85 98.82 1456 reject_low 10 ALIGNMENT 0 YS2-4h10.q1k vc_4 328 122 5813 5812 C 207 0.00 1456 reject_low 7 ALIGNMENT 219 YS2-4h10.q1k vc_1 329 722 2531 2913 F 394 87.82 1456 reject_low 2 ALIGNMENT 0 YS2-4h10.q1k vc_7 489 122 6412 6411 C 368 0.00 1456 reject_low 18 ALIGNMENT 0 YS2-4h10.q1k vc_4 330 329 5872 6353 F 0 0.00 1456 reject_low 9 ALIGNMENT 0 YS2-4h10.q1k vc_1 122 328 2531 2530 F 207 0.00 1456 reject_low 2 ALIGNMENT 47 YS2-4h10.q1k vc_7 722 542 5000 5171 C 181 79.56 1456 reject_low 18 ALIGNMENT 0 YS2-4h10.q1k vc_5 290 122 5064 5063 C 169 0.00 1456 reject_low 14 ALIGNMENT 0 YS2-4h10.q1k vc_3 122 328 2531 2530 F 207 0.00 1456 reject_low 4 ALIGNMENT 42 YS2-4h10.q1k vc_2 329 288 2105 2146 C 42 100.00 1456 reject_low 12 ALIGNMENT 35 YS2-4h10.q1k vc_7 540 490 6362 6411 C 51 92.16 1456 reject_low 18 ALIGNMENT 0 YS2-4h10.q1k vc_7 328 122 2728 2727 C 207 0.00 1456 reject_low 6 ALIGNMENT 38 YS2-4h10.q1k vc_7 292 329 13525 13562 F 38 100.00 1456 reject_low 16 ALIGNMENT 39 YS2-4h10.q1k vc_5 329 291 5025 5063 C 39 100.00 1456 reject_low 14 ALIGNMENT 241 YS2-4h10.p1k chr03 279 31 247061 247309 C 249 99.60 296 accept_chi 0 ALIGNMENT 0 YS2-4h10.q1k vc_5 290 122 37 36 C 169 0.00 1456 reject_low 17 ALIGNMENT 0 YS2-4h10.q1k vc_7 122 291 63 62 F 170 0.00 1456 reject_low 15 ALIGNMENT 0 YS2-4h10.q1k vc_5 122 328 2398 2397 F 207 0.00 1456 reject_low 5 ALIGNMENT 219 YS2-4h10.q1k vc_5 329 722 2398 2780 F 394 87.82 1456 reject_low 5 ALIGNMENT 219 YS2-4h10.q1k vc_3 329 722 2531 2913 F 394 87.82 1456 reject_low 4 ALIGNMENT 0 YS2-4h10.p1k chr03 296 280 247062 247061 C 17 0.00 296 accept_chi 0 ALIGNMENT 210 YS2-4h10.q1k chr03 38 288 247064 247309 F 251 96.41 1456 accept_chi 1 ALIGNMENT 42 YS2-4h10.q1k vc_3 329 288 2472 2513 C 42 100.00 1456 reject_low 13 ALIGNMENT 0 YS2-4h10.q1k vc_7 541 541 5172 6361 C 1 0.00 1456 reject_low 18 ALIGNMENT 0 YS2-4h10.q1k vc_2 287 122 2147 2146 C 166 0.00 1456 reject_low 12 ALIGNMENT 219 YS2-4h10.q1k vc_2 329 722 2164 2546 F 394 87.82 1456 reject_low 3 ALIGNMENT 136 YS2-4h10.q1k vc_4 329 491 6353 6514 F 163 95.71 1456|1,0 reject_low 9 ALIGNMENT 42 YS2-4h10.q1k vc_1 329 288 2472 2513 C 42 100.00 1456 reject_low 11 ALIGNMENT 0 YS2-4h10.q1k vc_4 328 122 1535 1534 C 207 0.00 1456 reject_low 10 ALIGNMENT 651 YS2-4h11.q1k chr06 826 30 237669 238459 C 797 95.98 1529 accept 0 ALIGNMENT 1048 YS2-4h11.p1k chr06 30 1273 231999 233240 F 1244 96.38 1447 accept 0 ALIGNMENT 0 YS2-4h13.p1k chr07 698 62 541927 541926 C 637 0.00 1390 reject_low 13 ALIGNMENT 73 YS2-4h13.p1k chr13 776 691 290795 290880 C 86 95.35 1390 reject_low 8 ALIGNMENT 0 YS2-4h13.p1k chr07 693 62 328664 328663 C 632 0.00 1390 reject_low 4 ALIGNMENT 0 YS2-4h13.p1k chr11 773 929 141095 141094 F 157 0.00 1390 reject_low 11 ALIGNMENT 0 YS2-4h13.p1k chr11 62 697 141021 141020 F 636 0.00 1390 reject_low 11 ALIGNMENT 0 YS2-4h13.p1k chr07 929 778 328581 328580 C 152 0.00 1390 reject_low 4 ALIGNMENT 75 YS2-4h13.p1k chr11 698 772 141021 141095 F 75 100.00 1390 reject_low 11 ALIGNMENT 0 YS2-4h13.p1k chr05 929 773 354930 354929 C 157 0.00 1390 reject_low 6 ALIGNMENT 67 YS2-4h13.p1k chr09 772 691 197588 197669 C 82 93.90 1390 reject_low 14 ALIGNMENT 78 YS2-4h13.p1k chr07 777 694 328580 328663 C 84 97.62 1390 reject_low 4 ALIGNMENT 74 YS2-4h13.p1k chr07 772 699 541853 541926 C 74 100.00 1390 reject_low 13 ALIGNMENT 0 YS2-4h13.p1k chr05 929 773 177098 177097 C 157 0.00 1390 reject_low 5 ALIGNMENT 610 YS2-4h13.q1k chr02 36 856 639492 640297 F 821 93.18 1537 accept 0 ALIGNMENT 0 YS2-4h13.p1k chr09 929 778 370409 370408 C 152 0.00 1390 reject_low 7 ALIGNMENT 972 YS2-4h13.p1k chr02 1141 29 644787 645905 C 1113 96.77 1390 accept 0 ALIGNMENT 0 YS2-4h13.p1k chr10 778 929 116011 116010 F 152 0.00 1390 reject_low 2 ALIGNMENT 0 YS2-4h13.p1k chr04 62 690 1017192 1017191 F 629 0.00 1390 reject_low 15 ALIGNMENT 81 YS2-4h13.p1k chr03 691 774 82452 82535 F 84 98.81 1390 reject_low 3 ALIGNMENT 74 YS2-4h13.p1k chr12 771 692 797178 797257 C 80 97.50 1390 reject_low 10 ALIGNMENT 0 YS2-4h13.p1k chr05 773 929 487398 487397 F 157 0.00 1390 reject_low 12 ALIGNMENT 0 YS2-4h13.p1k chr05 689 62 177180 177179 C 628 0.00 1390 reject_low 5 ALIGNMENT 0 YS2-4h13.p1k chr16 62 685 210176 210175 F 624 0.00 1390 reject_low 1 ALIGNMENT 0 YS2-4h13.p1k chr12 929 772 797179 797178 C 158 0.00 1390 reject_low 10 ALIGNMENT 0 YS2-4h13.p1k chr13 690 62 290881 290880 C 629 0.00 1390 reject_low 8 ALIGNMENT 0 YS2-4h13.p1k chr07 772 929 401601 401600 F 158 0.00 1390 reject_low 9 ALIGNMENT 0 YS2-4h13.p1k chr09 929 773 197589 197588 C 157 0.00 1390 reject_low 14 ALIGNMENT 77 YS2-4h13.p1k chr05 772 690 354929 355011 C 83 97.59 1390 reject_low 6 ALIGNMENT 0 YS2-4h13.p1k chr12 691 62 797258 797257 C 630 0.00 1390 reject_low 10 ALIGNMENT 78 YS2-4h13.p1k chr10 691 777 115926 116011 F 87 97.70 1390 reject_low 2 ALIGNMENT 0 YS2-4h13.p1k chr09 698 62 370487 370486 C 637 0.00 1390 reject_low 7 ALIGNMENT 0 YS2-4h13.p1k chr10 62 690 115926 115925 F 629 0.00 1390 reject_low 2 ALIGNMENT 76 YS2-4h13.p1k chr09 777 699 370408 370486 C 79 98.73 1390 reject_low 7 ALIGNMENT 0 YS2-4h13.p1k chr13 929 777 290796 290795 C 153 0.00 1390 reject_low 8 ALIGNMENT 76 YS2-4h13.p1k chr07 691 771 401522 401601 F 81 98.77 1390 reject_low 9 ALIGNMENT 0 YS2-4h13.p1k chr09 690 62 197670 197669 C 629 0.00 1390 reject_low 14 ALIGNMENT 0 YS2-4h13.p1k chr05 689 62 355012 355011 C 628 0.00 1390 reject_low 6 ALIGNMENT 74 YS2-4h13.p1k chr05 699 772 487325 487398 F 74 100.00 1390 reject_low 12 ALIGNMENT 0 YS2-4h13.p1k chr03 775 929 82535 82534 F 155 0.00 1390 reject_low 3 ALIGNMENT 0 YS2-4h13.p1k chr03 62 690 82452 82451 F 629 0.00 1390 reject_low 3 ALIGNMENT 78 YS2-4h13.p1k chr16 686 777 210176 210268 F 92 95.65 1390 reject_low 1 ALIGNMENT 77 YS2-4h13.p1k chr05 772 690 177097 177179 C 83 97.59 1390 reject_low 5 ALIGNMENT 0 YS2-4h13.p1k chr16 778 929 210268 210267 F 152 0.00 1390 reject_low 1 ALIGNMENT 0 YS2-4h13.p1k chr07 929 773 541854 541853 C 157 0.00 1390 reject_low 13 ALIGNMENT 0 YS2-4h13.p1k chr04 773 929 1017273 1017272 F 157 0.00 1390 reject_low 15 ALIGNMENT 61 YS2-4h13.p1k chr04 691 772 1017192 1017273 F 82 91.46 1390 reject_low 15 ALIGNMENT 0 YS2-4h13.p1k chr05 62 698 487325 487324 F 637 0.00 1390 reject_low 12 ALIGNMENT 0 YS2-4h13.p1k chr07 62 690 401522 401521 F 629 0.00 1390 reject_low 9 ALIGNMENT 578 YS2-4h14.q1k chr05 36 823 167704 168485 F 788 92.77 1404 accept 0 ALIGNMENT 955 YS2-4h14.p1k chr05 1110 34 171047 172140 C 1077 97.03 1383 accept 0 ALIGNMENT 0 YS2-4h15.q1k vc_3 425 107 2513 2512 C 319 0.00 1461 reject_low 12 ALIGNMENT 230 YS2-4h15.q1k vc_5 466 871 2398 2793 F 406 87.93 1461 reject_low 4 ALIGNMENT 230 YS2-4h15.q1k vc_7 871 466 2332 2727 C 406 88.18 1461 reject_low 5 ALIGNMENT 388 YS2-4h15.p1k chr10 30 424 180755 181150 F 395 99.75 441 accept 0 ALIGNMENT 0 YS2-4h15.p1k chr10 425 441 181150 181149 F 17 0.00 441 accept 0 ALIGNMENT 0 YS2-4h15.q1k vc_4 107 465 126 125 F 359 0.00 1461 reject_low 7 ALIGNMENT 126 YS2-4h15.q1k vc_4 466 630 6353 6514 F 165 93.94 1461|1,0 reject_low 8 ALIGNMENT 230 YS2-4h15.q1k vc_3 466 871 2531 2926 F 406 87.93 1461 reject_low 3 ALIGNMENT 0 YS2-4h15.q1k vc_3 107 465 2531 2530 F 359 0.00 1461 reject_low 3 ALIGNMENT 41 YS2-4h15.q1k vc_2 466 426 2105 2145 C 41 100.00 1461 reject_low 11 ALIGNMENT 0 YS2-4h15.q1k vc_4 107 425 5831 5830 F 319 0.00 1461 reject_low 8 ALIGNMENT 230 YS2-4h15.q1k vc_2 466 871 2164 2559 F 406 87.93 1461 reject_low 2 ALIGNMENT 230 YS2-4h15.q1k vc_1 466 871 2531 2926 F 406 87.93 1461 reject_low 1 ALIGNMENT 41 YS2-4h15.q1k vc_4 426 466 5831 5871 F 41 100.00 1461 reject_low 8 ALIGNMENT 0 YS2-4h15.q1k vc_5 427 107 37 36 C 321 0.00 1461 reject_low 15 ALIGNMENT 0 YS2-4h15.q1k vc_1 107 465 2531 2530 F 359 0.00 1461 reject_low 1 ALIGNMENT 0 YS2-4h15.q1k vc_7 107 428 13525 13524 F 322 0.00 1461 reject_low 14 ALIGNMENT 39 YS2-4h15.q1k vc_5 466 428 5025 5063 C 39 100.00 1461 reject_low 13 ALIGNMENT 0 YS2-4h15.q1k vc_2 425 107 2146 2145 C 319 0.00 1461 reject_low 11 ALIGNMENT 0 YS2-4h15.q1k vc_5 427 107 5064 5063 C 321 0.00 1461 reject_low 13 ALIGNMENT 223 YS2-4h15.q1k vc_4 871 466 5415 5812 C 406 87.68 1461 reject_low 6 ALIGNMENT 41 YS2-4h15.q1k vc_3 466 426 2472 2512 C 41 100.00 1461 reject_low 12 ALIGNMENT 0 YS2-4h15.q1k vc_2 107 465 2164 2163 F 359 0.00 1461 reject_low 2 ALIGNMENT 0 YS2-4h15.q1k vc_4 465 107 5813 5812 C 359 0.00 1461 reject_low 6 ALIGNMENT 0 YS2-4h15.q1k vc_5 107 465 2398 2397 F 359 0.00 1461 reject_low 4 ALIGNMENT 365 YS2-4h15.q1k chr10 422 29 180758 181150 C 394 98.22 1461 accept 0 ALIGNMENT 41 YS2-4h15.q1k vc_1 466 426 2472 2512 C 41 100.00 1461 reject_low 10 ALIGNMENT 36 YS2-4h15.q1k vc_5 463 428 1 36 C 36 100.00 1461 reject_low 15 ALIGNMENT 0 YS2-4h15.q1k vc_4 467 466 5872 6353 F 0 0.00 1461 reject_low 8 ALIGNMENT 0 YS2-4h15.q1k vc_7 465 107 2728 2727 C 359 0.00 1461 reject_low 5 ALIGNMENT 0 YS2-4h15.q1k vc_1 425 107 2513 2512 C 319 0.00 1461 reject_low 10 ALIGNMENT 0 YS2-4h15.q1k vc_4 465 107 1535 1534 C 359 0.00 1461 reject_low 9 ALIGNMENT 38 YS2-4h15.q1k vc_7 429 466 13525 13562 F 38 100.00 1461 reject_low 14 ALIGNMENT 0 YS2-4h15.q1k chr10 476 423 180759 180758 C 54 0.00 1461 accept 0 ALIGNMENT 126 YS2-4h15.q1k vc_4 466 630 126 287 F 165 93.94 1461 reject_low 7 ALIGNMENT 87 YS2-4h15.q1k vc_4 554 466 1446 1534 C 89 100.00 1461 reject_low 9 ALIGNMENT 991 YS2-4h16.p1k chr12 33 1175 1022676 1023820 F 1143 96.76 1432 accept 0 ALIGNMENT 689 YS2-4h16.q1k chr12 885 4 1026685 1027568 C 882 93.65 1340 accept 0 ALIGNMENT 41 YS2-4h17.q1k vc_1 332 292 2472 2512 C 41 100.00 1384 reject_low 12 ALIGNMENT 328 YS2-4h17.q1k vc_1 332 759 2531 2957 F 428 93.46 1384 reject_low 5 ALIGNMENT 0 YS2-4h17.q1k vc_1 291 92 2513 2512 C 200 0.00 1384 reject_low 12 ALIGNMENT 335 YS2-4h17.q1k vc_5 332 879 2398 2945 F 548 88.50 1384 reject_low 2 ALIGNMENT 0 YS2-4h17.q1k vc_5 544 333 5026 5025 C 212 0.00 1384 reject_low 15 ALIGNMENT 0 YS2-4h17.q1k vc_4 331 92 1535 1534 C 240 0.00 1384 reject_low 11 ALIGNMENT 0 YS2-4h17.q1k vc_5 293 92 37 36 C 202 0.00 1384 reject_low 18 ALIGNMENT 0 YS2-4h17.q1k vc_3 291 92 2513 2512 C 200 0.00 1384 reject_low 14 ALIGNMENT 0 YS2-4h17.q1k vc_7 333 544 100 99 F 212 0.00 1384 reject_low 16 ALIGNMENT 0 YS2-4h17.q1k vc_2 544 333 2106 2105 C 212 0.00 1384 reject_low 13 ALIGNMENT 0 YS2-4h17.q1k vc_3 92 331 2531 2530 F 240 0.00 1384 reject_low 7 ALIGNMENT 0 YS2-4h17.q1k vc_7 333 544 13562 13561 F 212 0.00 1384 reject_low 17 ALIGNMENT 41 YS2-4h17.q1k vc_4 292 332 5831 5871 F 41 100.00 1384 reject_low 9 ALIGNMENT 0 YS2-4h17.q1k vc_4 92 331 126 125 F 240 0.00 1384 reject_low 8 ALIGNMENT 122 YS2-4h17.q1k vc_7 759 543 4956 5172 C 217 87.10 1384|0,1 reject_low 10 ALIGNMENT 38 YS2-4h17.q1k vc_7 295 332 13525 13562 F 38 100.00 1384 reject_low 17 ALIGNMENT 0 YS2-4h17.q1k vc_4 494 544 287 286 F 51 0.00 1384 reject_low 8 ALIGNMENT 328 YS2-4h17.q1k vc_4 879 332 5263 5812 C 548 88.14 1384 reject_low 4 ALIGNMENT 328 YS2-4h17.q1k vc_3 332 759 2531 2957 F 428 93.46 1384 reject_low 7 ALIGNMENT 38 YS2-4h17.q1k vc_7 295 332 63 100 F 38 100.00 1384 reject_low 16 ALIGNMENT 0 YS2-4h17.q1k vc_1 544 333 2473 2472 C 212 0.00 1384 reject_low 12 ALIGNMENT 0 YS2-4h17.q1k vc_7 491 92 6412 6411 C 400 0.00 1384 reject_low 10 ALIGNMENT 159 YS2-4h17.q1k vc_4 332 493 126 287 F 162 100.00 1384 reject_low 8 ALIGNMENT 0 YS2-4h17.q1k vc_3 544 333 2473 2472 C 212 0.00 1384 reject_low 14 ALIGNMENT 0 YS2-4h17.q1k vc_1 92 331 2531 2530 F 240 0.00 1384 reject_low 5 ALIGNMENT 41 YS2-4h17.q1k vc_3 332 292 2472 2512 C 41 100.00 1384 reject_low 14 ALIGNMENT 0 YS2-4h17.q1k vc_4 544 421 1447 1446 C 124 0.00 1384 reject_low 11 ALIGNMENT 159 YS2-4h17.q1k vc_4 332 493 6353 6514 F 162 100.00 1384|1,0 reject_low 9 ALIGNMENT 236 YS2-4h17.p1k chr01 296 34 33051 33312 C 263 97.34 297 accept_chi 0 ALIGNMENT 0 YS2-4h17.q1k vc_7 543 544 5172 6360 C 0 0.00 1384 reject_low 10 ALIGNMENT 0 YS2-4h17.q1k vc_4 331 92 5813 5812 C 240 0.00 1384 reject_low 4 ALIGNMENT 0 YS2-4h17.q1k vc_4 494 544 6514 6513 F 51 0.00 1384 reject_low 9 ALIGNMENT 335 YS2-4h17.q1k vc_7 879 332 2180 2727 C 548 88.50 1384 reject_low 3 ALIGNMENT 39 YS2-4h17.q1k vc_5 332 294 5025 5063 C 39 100.00 1384 reject_low 15 ALIGNMENT 0 YS2-4h17.q1k vc_7 92 294 13525 13524 F 203 0.00 1384 reject_low 17 ALIGNMENT 0 YS2-4h17.q1k vc_5 293 92 5064 5063 C 202 0.00 1384 reject_low 15 ALIGNMENT 0 YS2-4h17.q1k vc_4 333 332 5872 6353 F 0 0.00 1384 reject_low 9 ALIGNMENT 0 YS2-4h17.q1k vc_7 92 294 63 62 F 203 0.00 1384 reject_low 16 ALIGNMENT 234 YS2-4h17.q1k chr01 31 292 33051 33312 F 262 96.95 1384 accept_chi 1 ALIGNMENT 0 YS2-4h17.q1k vc_2 291 92 2146 2145 C 200 0.00 1384 reject_low 13 ALIGNMENT 87 YS2-4h17.q1k vc_4 420 332 1446 1534 C 89 100.00 1384 reject_low 11 ALIGNMENT 41 YS2-4h17.q1k vc_2 332 292 2105 2145 C 41 100.00 1384 reject_low 13 ALIGNMENT 0 YS2-4h17.q1k vc_4 92 291 5831 5830 F 200 0.00 1384 reject_low 9 ALIGNMENT 0 YS2-4h17.q1k vc_5 544 330 2 1 C 215 0.00 1384 reject_low 18 ALIGNMENT 0 YS2-4h17.q1k vc_5 92 331 2398 2397 F 240 0.00 1384 reject_low 2 ALIGNMENT 47 YS2-4h17.q1k vc_7 544 492 6360 6411 C 53 98.11 1384|1,0 reject_low 10 ALIGNMENT 328 YS2-4h17.q1k vc_2 332 759 2164 2590 F 428 93.46 1384 reject_low 6 ALIGNMENT 0 YS2-4h17.q1k chr01 293 544 33312 33311 F 252 0.00 1384 accept_chi 1 ALIGNMENT 0 YS2-4h17.q1k vc_7 331 92 2728 2727 C 240 0.00 1384 reject_low 3 ALIGNMENT 0 YS2-4h17.q1k vc_2 92 331 2164 2163 F 240 0.00 1384 reject_low 6 ALIGNMENT 36 YS2-4h17.q1k vc_5 329 294 1 36 C 36 100.00 1384 reject_low 18 ALIGNMENT 929 YS2-4h18.p1k chr04 1140 31 411175 412281 C 1110 95.23 1260 accept_chi 0 ALIGNMENT 863 YS2-4h18.q1k chr04 988 25 411323 412282 C 964 97.41 1431 accept_chi 1 ALIGNMENT 319 YS2-4h19.p1k vc_3 483 1 1269 1749 C 483 90.06 697 reject_low 5 ALIGNMENT 361 YS2-4h19.q1k vc_7 470 1 2097 2569 C 470 93.19 828 reject_low 1 ALIGNMENT 319 YS2-4h19.p1k vc_2 483 1 1269 1749 C 483 90.06 697 reject_low 4 ALIGNMENT 53 YS2-4h19.q1k vc_4 302 239 49 112 C 64 95.31 828 reject_low 13 ALIGNMENT 97 YS2-4h19.q1k vc_4 309 534 1878 2114 F 226 83.63 828 reject_low 12 ALIGNMENT 0 YS2-4h19.q1k vc_7 309 303 4697 4923 C 7 0.00 828 reject_low 11 ALIGNMENT 275 YS2-4h19.q1k vc_3 1 302 2689 2989 F 302 97.35 828 reject_low 10 ALIGNMENT 223 YS2-4h19.q1k vc_7 302 53 4924 5172 C 250 96.80 828|0,1 reject_low 11 ALIGNMENT 320 YS2-4h19.p1k vc_6 1 483 3712 4192 F 483 90.06 697 reject_low 2 ALIGNMENT 314 YS2-4h19.p1k vc_7 1 483 13918 14398 F 483 89.65 697 reject_low 6 ALIGNMENT 0 YS2-4h19.q1k vc_4 303 308 1612 1877 F 6 0.00 828 reject_low 12 ALIGNMENT 53 YS2-4h19.q1k vc_4 239 302 1548 1611 F 64 95.31 828 reject_low 12 ALIGNMENT 336 YS2-4h19.q1k vc_4 421 1 5232 5654 C 421 94.06 828 reject_low 7 ALIGNMENT 375 YS2-4h19.q1k vc_5 1 581 2556 3150 F 581 89.50 828 reject_vc 0 ALIGNMENT 0 YS2-4h19.q1k vc_7 53 54 5172 6360 C 0 0.00 828 reject_low 11 ALIGNMENT 275 YS2-4h19.q1k vc_1 1 302 2689 2989 F 302 97.35 828 reject_low 8 ALIGNMENT 66 YS2-4h19.q1k vc_7 421 310 4583 4696 C 112 88.39 828 reject_low 11 ALIGNMENT 319 YS2-4h19.p1k vc_5 483 1 4189 4669 C 483 90.06 697 reject_vc 0 ALIGNMENT 48 YS2-4h19.q1k vc_7 54 3 6360 6411 C 52 98.08 828|1,0 reject_low 11 ALIGNMENT 314 YS2-4h19.p1k vc_7 1 483 456 936 F 483 89.65 697 reject_low 1 ALIGNMENT 53 YS2-4h19.q1k vc_4 302 239 6276 6339 C 64 95.31 828 reject_low 14 ALIGNMENT 0 YS2-4h19.q1k vc_4 238 62 6340 6339 C 177 0.00 828 reject_low 14 ALIGNMENT 275 YS2-4h19.q1k vc_2 1 302 2322 2622 F 302 97.35 828 reject_low 9 ALIGNMENT 0 YS2-4h19.q1k vc_4 238 62 113 112 C 177 0.00 828 reject_low 13 ALIGNMENT 319 YS2-4h19.p1k vc_1 483 1 1269 1749 C 483 90.06 697 reject_low 3 ALIGNMENT 0 YS2-4h19.q1k vc_4 62 238 1548 1547 F 177 0.00 828 reject_low 12 ALIGNMENT 127 YS2-4h20.p1k chr10 183 35 376105 376253 C 149 97.32 201 accept 0 ALIGNMENT 0 YS2-4h20.p1k chr10 201 184 376106 376105 C 18 0.00 201 accept 0 ALIGNMENT 1008 YS2-4h22.p1k chr04 1171 26 1486217 1487375 C 1146 97.38 1289 accept 0 ALIGNMENT 692 YS2-4i01.q1k chr04 1 866 172492 173368 F 866 94.57 1165 accept 0 ALIGNMENT 999 YS2-4i01.p1k chr04 1181 31 175718 176877 C 1151 96.26 1325 accept 0 ALIGNMENT 985 YS2-4i02.p1k chr11 1164 34 339238 340379 C 1131 96.46 1390 accept 0 ALIGNMENT 439 YS2-4i03.q1k chr14 71 702 670874 671494 F 632 91.61 1548 accept 0 ALIGNMENT 1004 YS2-4i03.p1k chr14 1210 32 674423 675614 C 1179 95.84 1369 accept 0 ALIGNMENT 0 YS2-4i06.q1k vc_4 77 500 126 125 F 424 0.00 1485 reject_low 8 ALIGNMENT 0 YS2-4i06.q1k vc_5 462 77 5064 5063 C 386 0.00 1485 reject_low 14 ALIGNMENT 119 YS2-4i06.q1k vc_4 734 501 5586 5812 C 234 86.32 1485 reject_low 7 ALIGNMENT 0 YS2-4i06.q1k vc_5 462 77 37 36 C 386 0.00 1485 reject_low 16 ALIGNMENT 0 YS2-4i06.q1k vc_7 77 463 13525 13524 F 387 0.00 1485 reject_low 15 ALIGNMENT 78 YS2-4i06.q1k vc_4 590 501 1446 1534 C 90 96.67 1485 reject_low 10 ALIGNMENT 124 YS2-4i06.q1k vc_7 734 501 2503 2727 C 234 87.18 1485 reject_low 6 ALIGNMENT 0 YS2-4i06.q1k vc_5 77 500 2398 2397 F 424 0.00 1485 reject_low 5 ALIGNMENT 395 YS2-4i06.q1k chr05 460 31 192390 192820 C 430 98.37 1485 accept_chi 1 ALIGNMENT 41 YS2-4i06.q1k vc_2 501 461 2105 2145 C 41 100.00 1485 reject_low 12 ALIGNMENT 41 YS2-4i06.q1k vc_4 461 501 5831 5871 F 41 100.00 1485 reject_low 9 ALIGNMENT 0 YS2-4i06.q1k vc_3 77 500 2531 2530 F 424 0.00 1485 reject_low 4 ALIGNMENT 38 YS2-4i06.q1k vc_7 464 501 13525 13562 F 38 100.00 1485 reject_low 15 ALIGNMENT 0 YS2-4i06.q1k vc_2 77 500 2164 2163 F 424 0.00 1485 reject_low 3 ALIGNMENT 112 YS2-4i06.q1k vc_4 501 660 6353 6508 F 160 91.88 1485|1,0 reject_low 9 ALIGNMENT 0 YS2-4i06.p1k chr05 461 483 192820 192819 F 23 0.00 483 accept_chi 0 ALIGNMENT 112 YS2-4i06.q1k vc_4 501 660 126 281 F 160 91.88 1485 reject_low 8 ALIGNMENT 124 YS2-4i06.q1k vc_2 501 734 2164 2388 F 234 87.18 1485 reject_low 3 ALIGNMENT 124 YS2-4i06.q1k vc_5 501 734 2398 2622 F 234 87.18 1485 reject_low 5 ALIGNMENT 0 YS2-4i06.q1k vc_4 502 501 5872 6353 F 0 0.00 1485 reject_low 9 ALIGNMENT 41 YS2-4i06.q1k vc_3 501 461 2472 2512 C 41 100.00 1485 reject_low 13 ALIGNMENT 0 YS2-4i06.q1k vc_2 460 77 2146 2145 C 384 0.00 1485 reject_low 12 ALIGNMENT 39 YS2-4i06.q1k vc_5 501 463 5025 5063 C 39 100.00 1485 reject_low 14 ALIGNMENT 0 YS2-4i06.q1k vc_4 500 77 5813 5812 C 424 0.00 1485 reject_low 7 ALIGNMENT 124 YS2-4i06.q1k vc_1 501 734 2531 2755 F 234 87.18 1485 reject_low 2 ALIGNMENT 0 YS2-4i06.q1k vc_1 460 77 2513 2512 C 384 0.00 1485 reject_low 11 ALIGNMENT 41 YS2-4i06.q1k vc_1 501 461 2472 2512 C 41 100.00 1485 reject_low 11 ALIGNMENT 124 YS2-4i06.q1k vc_3 501 734 2531 2755 F 234 87.18 1485 reject_low 4 ALIGNMENT 36 YS2-4i06.q1k vc_5 498 463 1 36 C 36 100.00 1485 reject_low 16 ALIGNMENT 0 YS2-4i06.q1k vc_1 77 500 2531 2530 F 424 0.00 1485 reject_low 2 ALIGNMENT 0 YS2-4i06.q1k vc_7 500 77 2728 2727 C 424 0.00 1485 reject_low 6 ALIGNMENT 0 YS2-4i06.q1k vc_4 77 460 5831 5830 F 384 0.00 1485 reject_low 9 ALIGNMENT 0 YS2-4i06.q1k vc_3 460 77 2513 2512 C 384 0.00 1485 reject_low 13 ALIGNMENT 415 YS2-4i06.p1k chr05 30 460 192390 192820 F 431 99.77 483 accept_chi 0 ALIGNMENT 0 YS2-4i06.q1k vc_4 500 77 1535 1534 C 424 0.00 1485 reject_low 10 ALIGNMENT 384 YS2-4i07.q1k chr02 721 102 359500 360117 C 620 88.39 1491 accept 0 ALIGNMENT 968 YS2-4i07.p1k chr02 29 1126 354179 355287 F 1098 97.09 1346 accept 0 ALIGNMENT 0 YS2-4i08.p1k chr14 318 302 424878 424877 C 17 0.00 318 accept 0 ALIGNMENT 306 YS2-4i08.q1k vc_5 1 500 2556 3049 F 500 88.60 977 reject_vc 1 ALIGNMENT 0 YS2-4i08.q1k vc_7 330 298 4678 4929 C 33 0.00 977 reject_vc 7 ALIGNMENT 29 YS2-4i08.q1k vc_7 415 331 4594 4677 C 85 81.18 977 reject_vc 7 ALIGNMENT 213 YS2-4i08.q1k vc_7 297 53 4930 5172 C 245 96.33 977|0,1 reject_vc 7 ALIGNMENT 267 YS2-4i08.q1k vc_1 1 297 2689 2983 F 297 97.31 977 reject_vc 4 ALIGNMENT 44 YS2-4i08.q1k vc_4 297 239 55 112 C 59 93.22 977 reject_vc 8 ALIGNMENT 39 YS2-4i08.q1k vc_4 331 500 1898 2065 F 170 77.65 977 reject_vc 10 ALIGNMENT 44 YS2-4i08.q1k vc_4 239 297 1548 1605 F 59 93.22 977 reject_vc 10 ALIGNMENT 294 YS2-4i08.q1k vc_7 415 1 2160 2569 C 415 91.57 977 reject_vc 2 ALIGNMENT 267 YS2-4i08.q1k vc_3 1 297 2689 2983 F 297 97.31 977 reject_vc 6 ALIGNMENT 0 YS2-4i08.q1k vc_4 298 330 1606 1897 F 33 0.00 977 reject_vc 10 ALIGNMENT 44 YS2-4i08.q1k vc_4 297 239 6282 6339 C 59 93.22 977 reject_vc 9 ALIGNMENT 287 YS2-4i08.q1k vc_4 415 1 5243 5654 C 415 91.08 977 reject_vc 3 ALIGNMENT 271 YS2-4i08.p1k chr14 301 30 424877 425148 C 272 100.00 318 accept 0 ALIGNMENT 51 YS2-4i08.q1k vc_7 54 3 6360 6411 C 52 100.00 977|1,0 reject_vc 7 ALIGNMENT 0 YS2-4i08.q1k vc_7 53 54 5172 6360 C 0 0.00 977 reject_vc 7 ALIGNMENT 267 YS2-4i08.q1k vc_2 1 297 2322 2616 F 297 97.31 977 reject_vc 5 ALIGNMENT 1026 YS2-4i09.p1k chr12 36 1184 426351 427508 F 1149 97.65 1348 accept 0 ALIGNMENT 76 YS2-4i09.p1k chr07 897 818 544573 544652 C 80 98.75 1348 reject_low 9 ALIGNMENT 75 YS2-4i09.p1k chr11 896 818 512967 513045 C 79 98.73 1348 reject_low 14 ALIGNMENT 0 YS2-4i09.p1k chr15 62 816 571957 571956 F 755 0.00 1348 reject_low 8 ALIGNMENT 0 YS2-4i09.p1k chr09 817 62 324373 324372 C 756 0.00 1348 reject_low 6 ALIGNMENT 0 YS2-4i09.p1k chr10 817 62 374412 374411 C 756 0.00 1348 reject_low 10 ALIGNMENT 0 YS2-4i09.p1k chr02 62 808 405947 405946 F 747 0.00 1348 reject_low 3 ALIGNMENT 0 YS2-4i09.p1k chr09 816 62 336419 336418 C 755 0.00 1348 reject_low 4 ALIGNMENT 0 YS2-4i09.p1k chr11 817 62 513046 513045 C 756 0.00 1348 reject_low 14 ALIGNMENT 77 YS2-4i09.p1k chr15 817 897 571957 572037 F 81 98.77 1348 reject_low 8 ALIGNMENT 573 YS2-4i09.q1k chr12 777 41 430265 431001 C 737 93.76 1439 accept 0 ALIGNMENT 75 YS2-4i09.p1k chr07 818 897 531614 531694 F 80 98.75 1348 reject_low 13 ALIGNMENT 0 YS2-4i09.p1k chr10 62 808 355365 355364 F 747 0.00 1348 reject_low 1 ALIGNMENT 77 YS2-4i09.p1k chr09 899 817 336337 336418 C 83 98.80 1348 reject_low 4 ALIGNMENT 0 YS2-4i09.p1k chr07 62 817 531614 531613 F 756 0.00 1348 reject_low 13 ALIGNMENT 0 YS2-4i09.p1k chr12 62 816 793917 793916 F 755 0.00 1348 reject_low 12 ALIGNMENT 76 YS2-4i09.p1k chr09 899 818 324292 324372 C 82 98.78 1348 reject_low 6 ALIGNMENT 76 YS2-4i09.p1k chr13 818 897 463553 463632 F 80 98.75 1348 reject_low 11 ALIGNMENT 79 YS2-4i09.p1k chr04 809 898 568954 569041 F 90 97.78 1348 reject_low 2 ALIGNMENT 0 YS2-4i09.p1k chr10 62 816 541421 541420 F 755 0.00 1348 reject_low 7 ALIGNMENT 77 YS2-4i09.p1k chr10 809 903 355365 355458 F 95 95.79 1348 reject_low 1 ALIGNMENT 76 YS2-4i09.p1k chr10 897 818 374332 374411 C 80 98.75 1348 reject_low 10 ALIGNMENT 75 YS2-4i09.p1k chr12 817 895 793917 793995 F 79 98.73 1348 reject_low 12 ALIGNMENT 0 YS2-4i09.p1k chr14 825 62 519164 519163 C 764 0.00 1348 reject_low 15 ALIGNMENT 67 YS2-4i09.p1k chr14 896 826 519093 519163 C 71 98.59 1348 reject_low 15 ALIGNMENT 75 YS2-4i09.p1k chr02 809 897 405947 406033 F 89 96.63 1348 reject_low 3 ALIGNMENT 0 YS2-4i09.p1k chr04 62 808 568954 568953 F 747 0.00 1348 reject_low 2 ALIGNMENT 0 YS2-4i09.p1k chr13 62 817 463553 463552 F 756 0.00 1348 reject_low 11 ALIGNMENT 78 YS2-4i09.p1k chr10 817 898 204651 204732 F 82 98.78 1348 reject_low 5 ALIGNMENT 0 YS2-4i09.p1k chr07 817 62 544653 544652 C 756 0.00 1348 reject_low 9 ALIGNMENT 77 YS2-4i09.p1k chr10 817 897 541421 541501 F 81 98.77 1348 reject_low 7 ALIGNMENT 0 YS2-4i09.p1k chr10 62 816 204651 204650 F 755 0.00 1348 reject_low 5 ALIGNMENT 789 YS2-4i10.p1k chr12 26 1075 391047 392108 F 1050 92.76 1405 accept 0 ALIGNMENT 369 YS2-4i10.q1k chr12 598 36 391880 392441 C 563 89.70 1486 accept 0 ALIGNMENT 411 YS2-4i11.q1k chr07 799 89 943227 943916 C 711 88.75 1477 accept 0 ALIGNMENT 969 YS2-4i11.p1k chr07 33 1139 942536 943658 F 1107 96.66 1343 accept 0 ALIGNMENT 86 YS2-4i12.q1k chr02 295 400 347593 347698 F 106 94.34 1539 reject_low 1 ALIGNMENT 71 YS2-4i12.p1k chr10 960 1050 424338 424430 F 91 93.41 1400 reject_low 8 ALIGNMENT 88 YS2-4i12.q1k chr10 395 301 424338 424432 C 95 97.89 1539 reject_low 7 ALIGNMENT 958 YS2-4i12.p1k chr11 1087 31 84172 85238 C 1057 97.82 1400 accept 0 ALIGNMENT 94 YS2-4i12.q1k chr12 404 303 962950 963051 C 102 98.04 1539 reject_low 3 ALIGNMENT 0 YS2-4i12.p1k chr04 968 62 519823 519822 C 907 0.00 1400 reject_low 10 ALIGNMENT 0 YS2-4i12.q1k chr12 302 137 963052 963051 C 166 0.00 1539 reject_low 3 ALIGNMENT 371 YS2-4i12.q1k chr11 31 706 83950 84607 F 676 88.17 1539 accept 0 ALIGNMENT 90 YS2-4i12.q1k chr14 404 302 726118 726219 C 103 97.09 1539 reject_low 6 ALIGNMENT 0 YS2-4i12.q1k chr02 137 294 347593 347592 F 158 0.00 1539 reject_low 1 ALIGNMENT 0 YS2-4i12.q1k chr10 300 137 424433 424432 C 164 0.00 1539 reject_low 7 ALIGNMENT 75 YS2-4i12.p1k chr14 952 1050 726118 726218 F 99 92.93 1400 reject_low 5 ALIGNMENT 78 YS2-4i12.q1k chr04 303 399 519739 519835 F 97 93.81 1539 reject_low 9 ALIGNMENT 0 YS2-4i12.p1k chr12 62 951 962951 962950 F 890 0.00 1400 reject_low 4 ALIGNMENT 75 YS2-4i12.p1k chr12 952 1050 962951 963051 F 99 92.93 1400 reject_low 4 ALIGNMENT 89 YS2-4i12.q1k chr02 302 397 9582 9677 F 96 97.92 1539 reject_low 2 ALIGNMENT 69 YS2-4i12.p1k chr02 1050 954 347601 347700 C 97 91.75 1400 reject_low 1 ALIGNMENT 0 YS2-4i12.p1k chr14 62 951 726118 726117 F 890 0.00 1400 reject_low 5 ALIGNMENT 0 YS2-4i12.p1k chr10 62 959 424338 424337 F 898 0.00 1400 reject_low 8 ALIGNMENT 0 YS2-4i12.p1k chr02 953 62 347701 347700 C 892 0.00 1400 reject_low 1 ALIGNMENT 0 YS2-4i12.q1k chr04 137 302 519739 519738 F 166 0.00 1539 reject_low 9 ALIGNMENT 62 YS2-4i12.p1k chr04 1050 969 519739 519822 C 82 92.68 1400 reject_low 10 ALIGNMENT 0 YS2-4i12.q1k chr02 137 301 9582 9581 F 165 0.00 1539 reject_low 2 ALIGNMENT 0 YS2-4i12.p1k chr02 957 62 9678 9677 C 896 0.00 1400 reject_low 2 ALIGNMENT 72 YS2-4i12.p1k chr02 1050 958 9583 9677 C 93 93.55 1400 reject_low 2 ALIGNMENT 0 YS2-4i12.q1k chr14 301 137 726220 726219 C 165 0.00 1539 reject_low 6 ALIGNMENT 770 YS2-4i14.q1k chr04 987 33 324312 325254 C 955 95.92 1498 accept 0 ALIGNMENT 941 YS2-4i14.p1k chr04 32 1091 320812 321879 F 1060 97.45 1285 accept 0 ALIGNMENT 174 YS2-4i15.p1k chr15 254 32 867582 867804 C 223 93.72 1337 reject_low 1 ALIGNMENT 43 YS2-4i15.p1k chr15 718 655 867091 867154 C 64 90.62 1337 reject_low 1 ALIGNMENT 498 YS2-4i15.q1k chr13 2 632 731851 732480 F 631 94.45 1215 accept 0 ALIGNMENT 0 YS2-4i15.p1k chr15 867 719 867092 867091 C 149 0.00 1337 reject_low 1 ALIGNMENT 965 YS2-4i15.p1k chr13 1152 32 731963 733095 C 1121 97.06 1337 accept 0 ALIGNMENT 0 YS2-4i15.p1k chr15 654 255 867155 867581 C 400 0.00 1337 reject_low 1 ALIGNMENT 1019 YS2-4i16.p1k chr13 36 1240 251747 252960 F 1205 95.93 1359 accept 0 ALIGNMENT 608 YS2-4i16.q1k chr13 857 33 256470 257292 C 825 92.24 1473 accept 0 ALIGNMENT 998 YS2-4i17.p1k chr13 33 1237 255626 256841 F 1205 95.85 1345 accept 0 ALIGNMENT 429 YS2-4i18.p1k vc_1 600 1 1143 1749 C 600 91.50 788 reject_vc 1 ALIGNMENT 423 YS2-4i18.p1k vc_7 1 600 456 1062 F 600 91.17 788 reject_vc 5 ALIGNMENT 429 YS2-4i18.p1k vc_6 1 600 3712 4318 F 600 91.17 788 reject_vc 4 ALIGNMENT 429 YS2-4i18.p1k vc_2 600 1 1143 1749 C 600 91.50 788 reject_vc 2 ALIGNMENT 423 YS2-4i18.p1k vc_7 1 600 13918 14524 F 600 91.17 788 reject_vc 6 ALIGNMENT 429 YS2-4i18.p1k vc_3 600 1 1143 1749 C 600 91.50 788 reject_vc 3 ALIGNMENT 430 YS2-4i18.p1k vc_5 600 1 4063 4669 C 600 91.33 788 reject_vc 0 ALIGNMENT 959 YS2-4i19.p1k chr08 31 1113 387030 388112 F 1083 97.51 1322 accept_chi 0 ALIGNMENT 928 YS2-4i19.q1k chr08 29 1176 387030 388176 F 1148 94.95 1347 accept_chi 1 ALIGNMENT 883 YS2-4i20.q1k chr05 1161 22 408379 409525 C 1140 94.21 1387 accept_chi 1 ALIGNMENT 979 YS2-4i20.p1k chr05 1139 30 408403 409525 C 1110 97.57 1370 accept_chi 0 ALIGNMENT 0 YS2-4i21.p1k chr13 1011 62 209905 209904 C 950 0.00 1295 reject_low 3 ALIGNMENT 22 YS2-4i21.p1k chr03 1012 1039 271471 271498 F 28 100.00 1295 reject_low 5 ALIGNMENT 0 YS2-4i21.p1k chr05 62 1017 309001 309000 F 956 0.00 1295 reject_low 4 ALIGNMENT 22 YS2-4i21.p1k chr05 1018 1045 309001 309028 F 28 100.00 1295 reject_low 4 ALIGNMENT 0 YS2-4i21.p1k chr03 62 1011 271471 271470 F 950 0.00 1295 reject_low 5 ALIGNMENT 22 YS2-4i21.q1k chr13 1041 1010 209872 209904 C 32 96.88 1318 reject_low 2 ALIGNMENT 1008 YS2-4i21.p1k chr12 41 1205 862724 863887 F 1165 96.91 1295 accept_chi 1 ALIGNMENT 26 YS2-4i21.p1k chr13 1044 1012 209872 209904 C 33 100.00 1295 reject_low 3 ALIGNMENT 0 YS2-4i21.q1k chr13 1009 62 209905 209904 C 948 0.00 1318 reject_low 2 ALIGNMENT 1003 YS2-4i21.q1k chr12 29 1216 862714 863886 F 1188 96.21 1318 accept_chi 0 ALIGNMENT 566 YS2-4i22.q1k chr02 776 28 567458 568197 C 749 93.86 1451 accept 0 ALIGNMENT 1040 YS2-4i22.p1k chr02 30 1217 565568 566766 F 1188 97.14 1353 accept 0 ALIGNMENT 626 YS2-4i23.q1k chr16 34 676 497341 497983 F 643 99.38 1283 reject_low 1 ALIGNMENT 1007 YS2-4i23.p1k chr11 1217 35 300097 301267 C 1183 96.96 1283 accept 0 ALIGNMENT 0 YS2-4i23.q1k chr11 62 676 297542 297541 F 615 0.00 1283 accept 0 ALIGNMENT 170 YS2-4i23.q1k chr11 677 990 297542 297856 F 314 86.31 1283 accept 0 ALIGNMENT 0 YS2-4i23.q1k chr16 677 697 497983 497982 F 21 0.00 1283 reject_low 1 ALIGNMENT 195 YS2-4i24.p1k chr14 32 228 615566 615762 F 197 100.00 246 accept 0 ALIGNMENT 0 YS2-4i24.p1k chr14 229 246 615762 615761 F 18 0.00 246 accept 0 ALIGNMENT 38 YS2-4j01.q1k vc_7 344 381 13525 13562 F 38 100.00 1242 reject_low 21 ALIGNMENT 250 YS2-4j01.p1k vc_1 415 1 1331 1749 C 415 88.19 594 reject_low 3 ALIGNMENT 0 YS2-4j01.q1k vc_4 62 380 126 125 F 319 0.00 1242 reject_low 12 ALIGNMENT 0 YS2-4j01.q1k vc_4 380 62 1535 1534 C 319 0.00 1242 reject_low 14 ALIGNMENT 0 YS2-4j01.q1k vc_7 540 62 6412 6411 C 479 0.00 1242 reject_low 19 ALIGNMENT 0 YS2-4j01.q1k vc_3 62 380 2531 2530 F 319 0.00 1242 reject_low 10 ALIGNMENT 0 YS2-4j01.q1k vc_5 338 62 5068 5067 C 277 0.00 1242 reject_low 18 ALIGNMENT 0 YS2-4j01.q1k vc_3 437 382 2473 2472 C 56 0.00 1242 reject_low 17 ALIGNMENT 250 YS2-4j01.p1k vc_3 415 1 1331 1749 C 415 88.19 594 reject_low 5 ALIGNMENT 247 YS2-4j01.p1k vc_7 1 415 13918 14336 F 415 87.95 594 reject_low 6 ALIGNMENT 0 YS2-4j01.q1k vc_1 340 62 2513 2512 C 279 0.00 1242 reject_low 15 ALIGNMENT 0 YS2-4j01.q1k vc_7 380 62 2728 2727 C 319 0.00 1242 reject_low 2 ALIGNMENT 37 YS2-4j01.q1k vc_5 378 339 1 40 C 40 97.50 1242 reject_low 20 ALIGNMENT 0 YS2-4j01.q1k vc_4 62 340 5831 5830 F 279 0.00 1242 reject_low 13 ALIGNMENT 41 YS2-4j01.q1k vc_3 381 341 2472 2512 C 41 100.00 1242 reject_low 17 ALIGNMENT 0 YS2-4j01.q1k vc_5 338 62 41 40 C 277 0.00 1242 reject_low 20 ALIGNMENT 0 YS2-4j01.q1k vc_5 437 379 2 1 C 59 0.00 1242 reject_low 20 ALIGNMENT 248 YS2-4j01.p1k vc_6 1 380 3712 4093 F 380 89.74 594 reject_low 7 ALIGNMENT 0 YS2-4j01.q1k vc_2 62 380 2164 2163 F 319 0.00 1242 reject_low 9 ALIGNMENT 41 YS2-4j01.q1k vc_4 341 381 5831 5871 F 41 100.00 1242 reject_low 13 ALIGNMENT 41 YS2-4j01.q1k vc_2 381 341 2105 2145 C 41 100.00 1242 reject_low 16 ALIGNMENT 0 YS2-4j01.q1k vc_1 62 380 2531 2530 F 319 0.00 1242 reject_low 8 ALIGNMENT 142 YS2-4j01.q1k vc_4 381 542 6353 6514 F 162 96.30 1242|1,0 reject_low 13 ALIGNMENT 236 YS2-4j01.q1k vc_2 381 811 2164 2600 F 431 86.31 1242 reject_low 9 ALIGNMENT 250 YS2-4j01.p1k vc_2 415 1 1331 1749 C 415 88.19 594 reject_low 4 ALIGNMENT 231 YS2-4j01.q1k vc_4 811 381 5374 5812 C 431 85.85 1242 reject_low 11 ALIGNMENT 0 YS2-4j01.q1k chr02 437 341 803332 803331 C 97 0.00 1242 accept 0 ALIGNMENT 0 YS2-4j01.q1k vc_5 62 380 2398 2397 F 319 0.00 1242 reject_low 1 ALIGNMENT 236 YS2-4j01.q1k vc_1 381 811 2531 2967 F 431 86.31 1242 reject_low 8 ALIGNMENT 0 YS2-4j01.q1k vc_1 437 382 2473 2472 C 56 0.00 1242 reject_low 15 ALIGNMENT 250 YS2-4j01.p1k vc_5 415 1 4251 4669 C 415 88.19 594 reject_low 1 ALIGNMENT 236 YS2-4j01.q1k vc_5 381 811 2398 2834 F 431 86.31 1242 reject_low 1 ALIGNMENT 40 YS2-4j01.q1k vc_5 381 339 5025 5067 C 43 97.67 1242 reject_low 18 ALIGNMENT 0 YS2-4j01.q1k vc_4 382 381 5872 6353 F 0 0.00 1242 reject_low 13 ALIGNMENT 0 YS2-4j01.q1k vc_7 62 343 13525 13524 F 282 0.00 1242 reject_low 21 ALIGNMENT 0 YS2-4j01.q1k vc_2 340 62 2146 2145 C 279 0.00 1242 reject_low 16 ALIGNMENT 85 YS2-4j01.q1k vc_4 469 381 1446 1534 C 89 98.88 1242 reject_low 14 ALIGNMENT 0 YS2-4j01.q1k vc_4 380 62 5813 5812 C 319 0.00 1242 reject_low 11 ALIGNMENT 230 YS2-4j01.q1k vc_7 757 381 2346 2727 C 377 88.33 1242 reject_low 2 ALIGNMENT 0 YS2-4j01.q1k vc_7 382 437 13562 13561 F 56 0.00 1242 reject_low 21 ALIGNMENT 317 YS2-4j01.q1k chr02 340 1 803331 803670 C 340 98.53 1242 accept 0 ALIGNMENT 0 YS2-4j01.q1k vc_3 340 62 2513 2512 C 279 0.00 1242 reject_low 17 ALIGNMENT 247 YS2-4j01.p1k vc_7 1 415 456 874 F 415 87.95 594 reject_low 2 ALIGNMENT 236 YS2-4j01.q1k vc_3 381 811 2531 2967 F 431 86.31 1242 reject_low 10 ALIGNMENT 142 YS2-4j01.q1k vc_4 381 542 126 287 F 162 96.30 1242 reject_low 12 ALIGNMENT 0 YS2-4j01.q1k vc_5 437 382 5026 5025 C 56 0.00 1242 reject_low 18 ALIGNMENT 41 YS2-4j01.q1k vc_1 381 341 2472 2512 C 41 100.00 1242 reject_low 15 ALIGNMENT 41 YS2-4j01.q1k vc_7 592 541 6360 6411 C 52 94.23 1242 reject_low 19 ALIGNMENT 0 YS2-4j01.q1k vc_2 437 382 2106 2105 C 56 0.00 1242 reject_low 16 ALIGNMENT 275 YS2-4j02.p1k chr14 29 427 6222 6616 F 399 90.98 1433 reject_low 18 ALIGNMENT 103 YS2-4j02.p1k chr05 1109 782 569951 570282 C 328 81.10 1433 reject_low 14 ALIGNMENT 275 YS2-4j02.p1k chr15 427 29 1084616 1085010 C 399 90.98 1433 reject_low 19 ALIGNMENT 210 YS2-4j02.p1k chr05 421 29 570331 570710 C 393 87.02 1433 reject_low 14 ALIGNMENT 0 YS2-4j02.p1k chr15 1074 1040 1084308 1084328 C 35 0.00 1433 reject_low 19 ALIGNMENT 70 YS2-4j02.p1k chr04 1234 782 1524831 1525291 C 453 76.82 1433 ambiguous_tel 7 ALIGNMENT 133 YS2-4j02.p1k chr14 1066 721 783679 784029 C 346 83.82 1433 ambiguous_tel 5 ALIGNMENT 0 YS2-4j02.p1k chr12 433 781 11201 11411 F 349 0.00 1433 ambiguous_tel 4 ALIGNMENT 20 YS2-4j02.p1k chr15 1109 1075 1084273 1084307 C 35 85.71 1433 reject_low 19 ALIGNMENT 0 YS2-4j02.p1k chr05 781 422 570283 570330 C 360 0.00 1433 reject_low 14 ALIGNMENT 218 YS2-4j02.p1k chr12 431 39 1065150 1065529 C 393 87.53 1433 reject_low 17 ALIGNMENT 0 YS2-4j02.p1k chr12 433 781 5666 11411 F 349 0.00 1433 ambiguous_tel 3 ALIGNMENT 0 YS2-4j02.p1k chr13 434 741 5543 5606 F 308 0.00 1433 ambiguous_tel 6 ALIGNMENT 72 YS2-4j02.p1k chr12 1061 742 1064686 1065012 C 320 79.06 1433 reject_low 10,17 ALIGNMENT 0 YS2-4j02.p1k chr14 1067 1188 7026 7156 F 122 0.00 1433 reject_low 18 ALIGNMENT 0 YS2-4j02.p1k chr04 781 432 1525292 1525446 C 350 0.00 1433 ambiguous_tel 7 ALIGNMENT 62 YS2-4j02.p1k chr09 934 1234 7250 7561 F 301 77.41 1433 reject_low 15 ALIGNMENT 89 YS2-4j02.p1k chr03 742 1234 382 875 F 493 77.69 1433 reject_low 12 ALIGNMENT 94 YS2-4j02.p1k chr14 736 1066 6703 7025 F 331 82.18 1433 reject_low 18 ALIGNMENT 275 YS2-4j02.p1k chr16 29 427 6131 6525 F 399 90.98 1433 reject_low 8 ALIGNMENT 0 YS2-4j02.p1k chr12 741 432 1065013 1065149 C 310 0.00 1433 reject_low 17 ALIGNMENT 276 YS2-4j02.p1k chr04 431 29 1525447 1525845 C 403 90.82 1433 ambiguous_tel 7 ALIGNMENT 104 YS2-4j02.p1k chr12 782 1167 11412 11791 F 386 81.09 1433 ambiguous_tel 3,4 ALIGNMENT 0 YS2-4j02.p1k chr08 763 432 556823 556982 C 332 0.00 1433 reject_low 9 ALIGNMENT 0 YS2-4j02.p1k chr09 379 933 6948 7249 F 555 0.00 1433 reject_low 15 ALIGNMENT 62 YS2-4j02.p1k chr10 934 1234 7233 7544 F 301 77.41 1433 reject_low 16 ALIGNMENT 97 YS2-4j02.p1k chr08 1057 764 556524 556822 C 294 82.65 1433 reject_low 9 ALIGNMENT 183 YS2-4j02.p1k chr09 29 378 6611 6947 F 350 86.86 1433 reject_low 15 ALIGNMENT 274 YS2-4j02.p1k chr12 29 432 10801 11200 F 404 90.59 1433 ambiguous_tel 4 ALIGNMENT 270 YS2-4j02.p1k chr08 431 39 556983 557370 C 393 90.84 1433 reject_low 9 ALIGNMENT 99 YS2-4j02.p1k chr16 764 1039 6531 6812 F 276 83.33 1433 reject_low 8 ALIGNMENT 275 YS2-4j02.p1k chr07 427 29 1084352 1084746 C 399 90.98 1433 ambiguous_tel 0 ALIGNMENT 21 YS2-4j02.p1k chr14 1189 1234 7157 7205 F 46 84.78 1433 reject_low 18 ALIGNMENT 183 YS2-4j02.p1k chr10 29 378 6594 6930 F 350 86.86 1433 reject_low 16 ALIGNMENT 0 YS2-4j02.p1k chr14 428 735 6617 6702 F 308 0.00 1433 reject_low 18 ALIGNMENT 0 YS2-4j02.p1k chr10 379 933 6931 7232 F 555 0.00 1433 reject_low 16 ALIGNMENT 0 YS2-4j02.p1k chr16 428 763 6526 6530 F 336 0.00 1433 reject_low 8 ALIGNMENT 106 YS2-4j02.p1k chr13 742 1053 5607 5922 F 312 83.01 1433 ambiguous_tel 6 ALIGNMENT 140 YS2-4j02.p1k chr05 39 246 6137 6338 F 208 91.35 1433 reject_low 11 ALIGNMENT 272 YS2-4j02.p1k chr06 29 427 4289 4683 F 399 90.73 1433 ambiguous_tel 1 ALIGNMENT 0 YS2-4j02.p1k chr12 741 428 1065013 1071651 C 314 0.00 1433 reject_low 10 ALIGNMENT 275 YS2-4j02.p1k chr12 427 29 1071652 1072046 C 399 90.98 1433 reject_low 10 ALIGNMENT 0 YS2-4j02.p1k chr15 781 428 1084593 1084615 C 354 0.00 1433 reject_low 19 ALIGNMENT 270 YS2-4j02.p1k chr02 39 427 5462 5845 F 389 91.00 1433 ambiguous_tel 2 ALIGNMENT 275 YS2-4j02.p1k chr13 29 433 5142 5542 F 405 90.62 1433 ambiguous_tel 6 ALIGNMENT 99 YS2-4j02.p1k chr15 1039 782 1084329 1084592 C 258 84.11 1433 reject_low 19 ALIGNMENT 274 YS2-4j02.p1k chr12 29 432 5266 5665 F 404 90.59 1433 ambiguous_tel 3 ALIGNMENT 127 YS2-4j02.p1k chr04 742 1053 169 482 F 312 84.94 1433 reject_low 13 ALIGNMENT 962 YS2-4j03.p1k chr02 30 1117 623305 624406 F 1088 97.43 1341 accept 0 ALIGNMENT 580 YS2-4j03.q1k chr02 809 27 627791 628561 C 783 92.98 1586 accept 0 ALIGNMENT 300 YS2-4j04.q1k vc_7 451 1 2126 2569 C 451 90.24 973 reject_vc 2 ALIGNMENT 0 YS2-4j04.p1k chr13 335 318 379538 379537 C 18 0.00 335 accept 0 ALIGNMENT 269 YS2-4j04.p1k chr13 317 29 379537 379825 C 289 98.62 335 accept 0 ALIGNMENT 0 YS2-4j04.q1k vc_4 62 309 1879 1878 F 248 0.00 973 reject_vc 8 ALIGNMENT 283 YS2-4j04.q1k vc_4 427 1 5232 5654 C 427 90.16 973 reject_vc 3 ALIGNMENT 0 YS2-4j04.q1k vc_7 53 54 5172 6360 C 0 0.00 973 reject_vc 7 ALIGNMENT 51 YS2-4j04.q1k vc_7 54 3 6360 6411 C 52 100.00 973|1,0 reject_vc 7 ALIGNMENT 245 YS2-4j04.q1k vc_1 1 304 2689 2990 F 304 94.08 973 reject_vc 4 ALIGNMENT 0 YS2-4j04.q1k vc_7 306 305 4700 4922 C 2 0.00 973 reject_vc 7 ALIGNMENT 300 YS2-4j04.q1k vc_5 1 451 2556 2999 F 451 90.02 973 reject_vc 1 ALIGNMENT 245 YS2-4j04.q1k vc_2 1 304 2322 2623 F 304 94.08 973 reject_vc 5 ALIGNMENT 45 YS2-4j04.q1k vc_7 427 307 4583 4699 C 121 82.64 973 reject_vc 7 ALIGNMENT 190 YS2-4j04.q1k vc_7 304 53 4923 5172 C 252 92.46 973|0,1 reject_vc 7 ALIGNMENT 51 YS2-4j04.q1k vc_4 310 451 1879 2015 F 142 81.69 973 reject_vc 8 ALIGNMENT 245 YS2-4j04.q1k vc_3 1 304 2689 2990 F 304 94.08 973 reject_vc 6 ALIGNMENT 702 YS2-4j05.q1k chr06 904 28 268804 269681 C 877 94.75 1422 accept 0 ALIGNMENT 1021 YS2-4j05.p1k chr06 39 1198 268014 269183 F 1160 97.67 1427 accept 0 ALIGNMENT 346 YS2-4j06.p1k chr16 327 689 809063 809425 F 363 99.72 696 ambiguous_trans 11 ALIGNMENT 0 YS2-4j06.p1k chr02 326 62 261070 261069 C 265 0.00 696 reject_low 17 ALIGNMENT 0 YS2-4j06.p1k chr05 62 326 447818 447817 F 265 0.00 696 ambiguous_trans 9 ALIGNMENT 346 YS2-4j06.p1k chr02 689 327 260707 261069 C 363 99.72 696 reject_low 17 ALIGNMENT 349 YS2-4j06.p1k chr04 327 689 649919 650281 F 363 100.00 696 reject_low 13 ALIGNMENT 349 YS2-4j06.p1k chr07 327 689 566269 566631 F 363 100.00 696 ambiguous_trans 1 ALIGNMENT 346 YS2-4j06.p1k chr04 327 689 882720 883082 F 363 99.72 696 ambiguous_trans 7 ALIGNMENT 0 YS2-4j06.p1k chr16 326 62 845908 845907 C 265 0.00 696 reject_low 24 ALIGNMENT 249 YS2-4j06.q1k chr16 25 377 57589 57941 F 353 91.78 1680 reject_low 35 ALIGNMENT 346 YS2-4j06.p1k chr10 689 327 473514 473876 C 363 99.72 696 reject_low 19 ALIGNMENT 249 YS2-4j06.q1k chr12 377 25 480409 480761 C 353 91.78 1680 reject_low 32 ALIGNMENT 349 YS2-4j06.p1k chr12 327 689 219507 219869 F 363 100.00 696 ambiguous_trans_ua 4 ALIGNMENT 249 YS2-4j06.q1k chr10 25 377 479099 479451 F 353 91.78 1680 reject_low 31 ALIGNMENT 249 YS2-4j06.q1k chr04 377 25 882729 883081 C 353 91.78 1680 ambiguous_trans 7 ALIGNMENT 0 YS2-4j06.p1k chr10 326 62 479461 479460 C 265 0.00 696 ambiguous_trans 10 ALIGNMENT 0 YS2-4j06.p1k chr04 62 326 649919 649918 F 265 0.00 696 reject_low 13 ALIGNMENT 346 YS2-4j06.p1k chr04 327 689 991141 991503 F 363 99.72 696 ambiguous_trans 8 ALIGNMENT 123 YS2-4j06.q1k chr02 25 377 222174 222526 F 353 79.89 1680 reject_low 38 ALIGNMENT 0 YS2-4j06.p1k chr13 62 326 377122 377121 F 265 0.00 696 ambiguous_trans 5 ALIGNMENT 249 YS2-4j06.q1k chr16 25 377 845546 845898 F 353 91.78 1680 reject_low 36 ALIGNMENT 249 YS2-4j06.q1k chr16 377 25 809072 809424 C 353 91.78 1680 ambiguous_trans 11 ALIGNMENT 346 YS2-4j06.p1k chr07 689 327 536901 537263 C 363 99.72 696 reject_low 18 ALIGNMENT 0 YS2-4j06.p1k chr10 326 62 473877 473876 C 265 0.00 696 reject_low 19 ALIGNMENT 0 YS2-4j06.p1k chr16 326 62 57951 57950 C 265 0.00 696 reject_low 23 ALIGNMENT 346 YS2-4j06.p1k chr13 689 327 197468 197830 C 363 99.72 696 ambiguous_trans_ua 6 ALIGNMENT 0 YS2-4j06.p1k chr12 62 326 219507 219506 F 265 0.00 696 ambiguous_trans_ua 4 ALIGNMENT 0 YS2-4j06.p1k chr14 326 62 520660 520659 C 265 0.00 696 reject_low 22 ALIGNMENT 346 YS2-4j06.p1k chr14 689 327 520297 520659 C 363 99.72 696 reject_low 22 ALIGNMENT 0 YS2-4j06.p1k chr07 326 62 537264 537263 C 265 0.00 696 reject_low 18 ALIGNMENT 249 YS2-4j06.q1k chr05 377 25 447827 448179 C 353 91.78 1680 ambiguous_trans 9 ALIGNMENT 252 YS2-4j06.q1k chr13 25 377 185302 185654 F 353 92.07 1680 ambiguous_trans_ua 6 ALIGNMENT 0 YS2-4j06.p1k chr13 326 62 185664 185663 C 265 0.00 696 reject_low 15 ALIGNMENT 252 YS2-4j06.q1k chr08 377 25 548039 548391 C 353 92.07 1680 ambiguous_trans 3 ALIGNMENT 0 YS2-4j06.p1k chr16 62 326 809063 809062 F 265 0.00 696 ambiguous_trans 11 ALIGNMENT 0 YS2-4j06.p1k chr13 62 327 361425 361424 F 266 0.00 696 reject_low 25 ALIGNMENT 116 YS2-4j06.q1k chr13 338 25 361471 361785 C 314 80.25 1680 reject_low 25 ALIGNMENT 0 YS2-4j06.p1k chr02 327 62 222535 222534 C 266 0.00 696 reject_low 26 ALIGNMENT 0 YS2-4j06.p1k chr13 326 62 197831 197830 C 265 0.00 696 ambiguous_trans_ua 6 ALIGNMENT 0 YS2-4j06.p1k chr12 326 62 652322 652321 C 265 0.00 696 reject_low 21 ALIGNMENT 195 YS2-4j06.p1k chr13 328 689 361425 361786 F 362 85.91 696 reject_low 25 ALIGNMENT 349 YS2-4j06.p1k chr04 689 327 1096899 1097261 C 363 100.00 696 reject_low 14 ALIGNMENT 252 YS2-4j06.q1k chr13 377 25 377131 377483 C 353 92.07 1680 ambiguous_trans 5 ALIGNMENT 195 YS2-4j06.p1k chr02 689 328 222173 222534 C 362 85.91 696 reject_low 26 ALIGNMENT 252 YS2-4j06.q1k chr04 25 377 1096900 1097252 F 353 92.07 1680 reject_low 27 ALIGNMENT 0 YS2-4j06.p1k chr05 62 326 496917 496916 F 265 0.00 696 ambiguous_trans 0 ALIGNMENT 349 YS2-4j06.p1k chr13 327 689 377122 377484 F 363 100.00 696 ambiguous_trans 5 ALIGNMENT 349 YS2-4j06.p1k chr08 327 689 548030 548392 F 363 100.00 696 ambiguous_trans 3 ALIGNMENT 249 YS2-4j06.q1k chr02 25 377 260708 261060 F 353 91.78 1680 reject_low 28 ALIGNMENT 346 YS2-4j06.p1k chr10 689 327 479098 479460 C 363 99.72 696 ambiguous_trans 10 ALIGNMENT 346 YS2-4j06.p1k chr16 689 327 845545 845907 C 363 99.72 696 reject_low 24 ALIGNMENT 0 YS2-4j06.p1k chr04 62 326 991141 991140 F 265 0.00 696 ambiguous_trans 8 ALIGNMENT 0 YS2-4j06.p1k chr08 62 326 548030 548029 F 265 0.00 696 ambiguous_trans 3 ALIGNMENT 346 YS2-4j06.p1k chr01 327 689 164665 165027 F 363 99.72 696 reject_low 16 ALIGNMENT 0 YS2-4j06.p1k chr12 326 62 594643 594642 C 265 0.00 696 reject_low 20 ALIGNMENT 249 YS2-4j06.q1k chr10 25 377 473515 473867 F 353 91.78 1680 ambiguous_trans 10 ALIGNMENT 252 YS2-4j06.q1k chr12 377 25 219516 219868 C 353 92.07 1680 ambiguous_trans_ua 4 ALIGNMENT 0 YS2-4j06.p1k chr01 62 326 164665 164664 F 265 0.00 696 reject_low 16 ALIGNMENT 0 YS2-4j06.p1k chr07 62 326 566269 566268 F 265 0.00 696 ambiguous_trans 1 ALIGNMENT 0 YS2-4j06.p1k chr16 62 326 855051 855050 F 265 0.00 696 ambiguous_trans 12 ALIGNMENT 346 YS2-4j06.p1k chr12 689 327 594280 594642 C 363 99.72 696 reject_low 20 ALIGNMENT 346 YS2-4j06.p1k chr05 327 689 447818 448180 F 363 99.72 696 ambiguous_trans 9 ALIGNMENT 249 YS2-4j06.q1k chr12 25 377 594281 594633 F 353 91.78 1680 reject_low 33 ALIGNMENT 249 YS2-4j06.q1k chr07 25 377 536902 537254 F 353 91.78 1680 reject_low 30 ALIGNMENT 346 YS2-4j06.p1k chr12 689 327 651959 652321 C 363 99.72 696 reject_low 21 ALIGNMENT 0 YS2-4j06.p1k chr04 62 326 882720 882719 F 265 0.00 696 ambiguous_trans 7 ALIGNMENT 0 YS2-4j06.p1k chr04 326 62 1097262 1097261 C 265 0.00 696 reject_low 14 ALIGNMENT 252 YS2-4j06.q1k chr05 377 25 496926 497278 C 353 92.07 1680 ambiguous_trans 0 ALIGNMENT 249 YS2-4j06.q1k chr04 25 377 1207828 1208180 F 353 91.78 1680 reject_low 29 ALIGNMENT 349 YS2-4j06.p1k chr07 327 689 821818 822180 F 363 100.00 696 ambiguous_trans 2 ALIGNMENT 252 YS2-4j06.q1k chr07 377 25 821827 822179 C 353 92.07 1680 ambiguous_trans 2 ALIGNMENT 246 YS2-4j06.q1k chr15 25 377 118840 119192 F 353 91.50 1680 reject_low 37 ALIGNMENT 349 YS2-4j06.p1k chr13 689 327 185301 185663 C 363 100.00 696 reject_low 15 ALIGNMENT 249 YS2-4j06.q1k chr16 377 25 855060 855412 C 353 91.78 1680 ambiguous_trans 12 ALIGNMENT 346 YS2-4j06.p1k chr16 327 689 855051 855413 F 363 99.72 696 ambiguous_trans 12 ALIGNMENT 252 YS2-4j06.q1k chr07 377 25 566278 566630 C 353 92.07 1680 ambiguous_trans 1 ALIGNMENT 249 YS2-4j06.q1k chr13 25 377 197469 197821 F 353 91.78 1680 reject_low 34 ALIGNMENT 0 YS2-4j06.p1k chr07 62 326 821818 821817 F 265 0.00 696 ambiguous_trans 2 ALIGNMENT 349 YS2-4j06.p1k chr05 327 689 496917 497279 F 363 100.00 696 ambiguous_trans 0 ALIGNMENT 249 YS2-4j06.q1k chr04 377 25 991150 991502 C 353 91.78 1680 ambiguous_trans 8 ALIGNMENT 346 YS2-4j06.p1k chr16 689 327 57588 57950 C 363 99.72 696 reject_low 23 ALIGNMENT 927 YS2-4j07.p1k chr08 1116 36 31458 32544 C 1081 96.30 1391 accept 0 ALIGNMENT 698 YS2-4j07.q1k chr08 3 916 30841 31744 F 914 94.53 1475 accept 0 ALIGNMENT 328 YS2-4j08.p1k chr07 33 378 846383 846728 F 346 99.71 395 accept 0 ALIGNMENT 54 YS2-4j08.q1k vc_1 2 135 2691 2822 F 134 82.84 893 reject_vc 1 ALIGNMENT 54 YS2-4j08.q1k vc_3 2 135 2691 2822 F 134 82.84 893 reject_vc 2 ALIGNMENT 54 YS2-4j08.q1k vc_7 135 2 2436 2567 C 134 82.84 893 reject_vc 3 ALIGNMENT 0 YS2-4j08.p1k chr07 379 395 846728 846727 F 17 0.00 395 accept 0 ALIGNMENT 1040 YS2-4j09.p1k chr13 37 1224 735477 736677 F 1188 97.05 1439 accept 0 ALIGNMENT 930 YS2-4j10.p1k chr16 1112 30 344754 345857 C 1083 96.77 1341 accept 0 ALIGNMENT 485 YS2-4j10.q1k chr16 32 838 340915 341709 F 807 88.85 1423 accept 0 ALIGNMENT 45 YS2-4j11.q1k vc_4 305 242 49 112 C 64 90.62 913 reject_low 8 ALIGNMENT 45 YS2-4j11.q1k vc_4 242 305 1548 1611 F 64 90.62 913 reject_low 9 ALIGNMENT 0 YS2-4j11.q1k vc_7 53 54 5172 6360 C 0 0.00 913 reject_vc 7 ALIGNMENT 260 YS2-4j11.p1k chr04 298 34 93165 93429 C 265 99.62 316 accept 0 ALIGNMENT 0 YS2-4j11.p1k chr04 316 299 93166 93165 C 18 0.00 316 accept 0 ALIGNMENT 272 YS2-4j11.q1k vc_4 378 1 5278 5654 C 378 92.33 913 reject_vc 3 ALIGNMENT 250 YS2-4j11.q1k vc_2 1 305 2322 2622 F 305 95.08 913 reject_vc 5 ALIGNMENT 196 YS2-4j11.q1k vc_7 305 53 4924 5172 C 253 93.68 913|0,1 reject_vc 7 ALIGNMENT 250 YS2-4j11.q1k vc_1 1 305 2689 2989 F 305 95.08 913 reject_vc 4 ALIGNMENT 279 YS2-4j11.q1k vc_7 378 1 2195 2569 C 378 92.86 913 reject_vc 2 ALIGNMENT 250 YS2-4j11.q1k vc_3 1 305 2689 2989 F 305 95.08 913 reject_vc 6 ALIGNMENT 45 YS2-4j11.q1k vc_4 305 242 6276 6339 C 64 90.62 913 reject_low 10 ALIGNMENT 275 YS2-4j11.q1k vc_5 1 515 2556 3068 F 515 86.21 913 reject_vc 1 ALIGNMENT 51 YS2-4j11.q1k vc_7 54 3 6360 6411 C 52 100.00 913|1,0 reject_vc 7 ALIGNMENT 0 YS2-4j12.p1k chr14 842 753 102715 102714 C 90 0.00 1288 reject_low 7 ALIGNMENT 0 YS2-4j12.p1k chr16 670 62 810752 810751 C 609 0.00 1288 reject_low 6 ALIGNMENT 0 YS2-4j12.p1k chr03 842 756 127709 127708 C 87 0.00 1288 reject_low 2 ALIGNMENT 80 YS2-4j12.p1k chr06 671 750 137475 137554 F 80 100.00 1288 reject_low 3 ALIGNMENT 0 YS2-4j12.p1k chr06 62 670 137475 137474 F 609 0.00 1288 reject_low 3 ALIGNMENT 80 YS2-4j12.p1k chr14 750 671 632601 632680 C 80 100.00 1288 reject_low 4 ALIGNMENT 0 YS2-4j12.p1k chr06 751 842 137554 137553 F 92 0.00 1288 reject_low 3 ALIGNMENT 78 YS2-4j12.p1k chr03 755 675 127708 127788 C 81 98.77 1288 reject_low 2 ALIGNMENT 77 YS2-4j12.p1k chr16 750 671 810672 810751 C 80 98.75 1288 reject_low 6 ALIGNMENT 0 YS2-4j12.p1k chr03 674 62 127789 127788 C 613 0.00 1288 reject_low 2 ALIGNMENT 0 YS2-4j12.p1k chr12 755 842 976056 976055 F 88 0.00 1288 reject_low 1 ALIGNMENT 0 YS2-4j12.p1k chr15 842 752 228329 228328 C 91 0.00 1288 reject_low 5 ALIGNMENT 0 YS2-4j12.p1k chr15 842 752 487440 487439 C 91 0.00 1288 reject_low 8 ALIGNMENT 0 YS2-4j12.p1k chr14 842 751 632602 632601 C 92 0.00 1288 reject_low 4 ALIGNMENT 77 YS2-4j12.p1k chr15 751 675 487439 487515 C 77 100.00 1288 reject_low 8 ALIGNMENT 924 YS2-4j12.p1k chr07 1131 33 730746 731859 C 1099 95.63 1288 accept 0 ALIGNMENT 79 YS2-4j12.p1k chr14 752 674 102714 102792 C 79 100.00 1288 reject_low 7 ALIGNMENT 0 YS2-4j12.p1k chr11 842 752 74629 74628 C 91 0.00 1288 reject_low 9 ALIGNMENT 75 YS2-4j12.p1k chr11 751 677 74628 74702 C 75 100.00 1288 reject_low 9 ALIGNMENT 0 YS2-4j12.p1k chr15 670 62 228409 228408 C 609 0.00 1288 reject_low 5 ALIGNMENT 0 YS2-4j12.p1k chr14 670 62 632681 632680 C 609 0.00 1288 reject_low 4 ALIGNMENT 618 YS2-4j12.q1k chr07 33 763 726082 726809 F 731 96.17 1435 accept 0 ALIGNMENT 0 YS2-4j12.p1k chr16 842 751 810673 810672 C 92 0.00 1288 reject_low 6 ALIGNMENT 0 YS2-4j12.p1k chr11 676 62 74703 74702 C 615 0.00 1288 reject_low 9 ALIGNMENT 0 YS2-4j12.p1k chr14 673 62 102793 102792 C 612 0.00 1288 reject_low 7 ALIGNMENT 0 YS2-4j12.p1k chr12 62 673 975976 975975 F 612 0.00 1288 reject_low 1 ALIGNMENT 78 YS2-4j12.p1k chr15 751 671 228328 228408 C 81 98.77 1288 reject_low 5 ALIGNMENT 0 YS2-4j12.p1k chr15 674 62 487516 487515 C 613 0.00 1288 reject_low 8 ALIGNMENT 81 YS2-4j12.p1k chr12 674 754 975976 976056 F 81 100.00 1288 reject_low 1 ALIGNMENT 276 YS2-4j13.p1k vc_1 1249 861 1707 2105 C 389 91.52 1430 reject_low 2 ALIGNMENT 0 YS2-4j13.p1k vc_2 860 62 2106 2105 C 799 0.00 1430 reject_low 3 ALIGNMENT 170 YS2-4j13.q1k chr07 43 420 758916 759284 F 378 84.39 1515 accept_chi 1 ALIGNMENT 0 YS2-4j13.p1k vc_7 62 860 100 99 F 799 0.00 1430 reject_low 6 ALIGNMENT 26 YS2-4j13.p1k vc_3 891 861 2441 2472 C 31 96.77 1430 reject_low 11 ALIGNMENT 0 YS2-4j13.p1k vc_1 860 62 2106 2105 C 799 0.00 1430 reject_low 2 ALIGNMENT 276 YS2-4j13.p1k vc_5 1249 861 4627 5025 C 389 91.52 1430 reject_low 5 ALIGNMENT 26 YS2-4j13.p1k vc_1 891 861 2441 2472 C 31 96.77 1430 reject_low 10 ALIGNMENT 276 YS2-4j13.p1k vc_7 861 1249 100 498 F 389 91.52 1430 reject_low 6 ALIGNMENT 0 YS2-4j13.p1k vc_3 860 62 2473 2472 C 799 0.00 1430 reject_low 11 ALIGNMENT 92 YS2-4j13.p1k vc_6 1090 1249 3585 3754 F 160 88.12 1430 reject_low 9 ALIGNMENT 276 YS2-4j13.p1k vc_3 1249 861 1707 2105 C 389 91.52 1430 reject_low 4 ALIGNMENT 0 YS2-4j13.p1k vc_6 62 1089 3585 3584 F 1028 0.00 1430 reject_low 9 ALIGNMENT 0 YS2-4j13.p1k vc_7 62 860 13562 13561 F 799 0.00 1430 reject_low 7 ALIGNMENT 0 YS2-4j13.p1k vc_5 860 62 5026 5025 C 799 0.00 1430 reject_low 5 ALIGNMENT 276 YS2-4j13.p1k vc_2 1249 861 1707 2105 C 389 91.52 1430 reject_low 3 ALIGNMENT 778 YS2-4j13.p1k chr07 842 28 758900 759715 C 815 99.39 1430 accept_chi 0 ALIGNMENT 0 YS2-4j13.p1k vc_4 62 860 5871 5870 F 799 0.00 1430 reject_low 8 ALIGNMENT 0 YS2-4j13.p1k vc_1 860 62 2473 2472 C 799 0.00 1430 reject_low 10 ALIGNMENT 0 YS2-4j13.p1k vc_3 860 62 2106 2105 C 799 0.00 1430 reject_low 4 ALIGNMENT 268 YS2-4j13.p1k vc_4 861 1212 5871 6226 F 352 92.90 1430 reject_low 8 ALIGNMENT 0 YS2-4j13.p1k chr07 879 843 758901 758900 C 37 0.00 1430 accept_chi 0 ALIGNMENT 276 YS2-4j13.p1k vc_7 861 1249 13562 13960 F 389 91.52 1430 reject_low 7 ALIGNMENT 805 YS2-4j14.p1k chr10 1077 33 251440 252489 C 1045 93.49 1365 accept 0 ALIGNMENT 990 YS2-4j15.p1k chr08 31 1100 25090 26165 F 1070 98.32 1350 accept 0 ALIGNMENT 752 YS2-4j15.q1k chr08 933 1 29910 30845 C 933 95.07 1350 accept 0 ALIGNMENT 71 YS2-4j15.q1k chr12 690 472 43584 43802 C 219 78.08 1350 reject_low 1 ALIGNMENT 0 YS2-4j15.q1k chr12 471 62 43803 43802 C 410 0.00 1350 reject_low 1 ALIGNMENT 0 YS2-4j16.q1k chr09 237 607 2382 2381 F 371 0.00 1509 reject_low 246 ALIGNMENT 33 YS2-4j16.q1k chr04 144 79 1530064 1530129 C 66 84.85 1509 reject_low 218 ALIGNMENT 0 YS2-4j16.q1k chr12 62 78 2150 2149 F 17 0.00 1509 reject_low 293 ALIGNMENT 116 YS2-4j16.q1k chr06 116 346 893 1123 F 231 84.42 1509 reject_low 127 ALIGNMENT 0 YS2-4j16.q1k chr02 62 90 2361 2360 F 29 0.00 1509 reject_low 238 ALIGNMENT 53 YS2-4j16.q1k chr15 289 199 1089552 1089642 C 91 86.81 1509 reject_low 191 ALIGNMENT 0 YS2-4j16.q1k chr06 62 186 892 891 F 125 0.00 1509 reject_low 155 ALIGNMENT 0 YS2-4j16.q1k chr10 62 78 2172 2171 F 17 0.00 1509 reject_low 180 ALIGNMENT 53 YS2-4j16.q1k chr09 235 340 1697 1802 F 106 83.96 1509 reject_low 172 ALIGNMENT 40 YS2-4j16.q1k chr08 91 158 1842 1909 F 68 88.24 1509 reject_low 216 ALIGNMENT 0 YS2-4j16.q1k chr06 347 607 1195 1194 F 261 0.00 1509 reject_low 111 ALIGNMENT 77 YS2-4j16.q1k chr07 289 152 1089257 1089394 C 138 86.23 1509 reject_low 160 ALIGNMENT 133 YS2-4j16.q1k chr12 344 80 1069690 1069954 C 265 84.53 1509 reject_low 17 ALIGNMENT 0 YS2-4j16.q1k chr06 62 222 892 891 F 161 0.00 1509 reject_low 169 ALIGNMENT 0 YS2-4j16.q1k chr10 62 168 1902 1901 F 107 0.00 1509 reject_low 154 ALIGNMENT 47 YS2-4j16.p1k chr13 771 719 3711 3763 C 53 96.23 1366 reject_low 252 ALIGNMENT 131 YS2-4j16.q1k chr16 288 91 945962 946159 C 198 89.90 1509 reject_low 253 ALIGNMENT 0 YS2-4j16.q1k chr14 326 607 1675 1674 F 282 0.00 1509 reject_low 213 ALIGNMENT 0 YS2-4j16.q1k chr14 62 79 1610 1609 F 18 0.00 1509 reject_low 92 ALIGNMENT 0 YS2-4j16.q1k chr08 607 330 560773 560772 C 278 0.00 1509 reject_low 233 ALIGNMENT 0 YS2-4j16.q1k chr16 82 62 946240 946239 C 21 0.00 1509 reject_low 240 ALIGNMENT 0 YS2-4j16.p1k chr08 553 614 558678 558693 F 62 0.00 1366 reject_low 264 ALIGNMENT 0 YS2-4j16.q1k chr02 290 607 1587 1586 F 318 0.00 1509 reject_low 184 ALIGNMENT 0 YS2-4j16.q1k chr12 607 145 1069603 1069602 C 463 0.00 1509 reject_low 44 ALIGNMENT 0 YS2-4j16.q1k chr16 62 198 1494 1493 F 137 0.00 1509 reject_low 192 ALIGNMENT 0 YS2-4j16.q1k chr10 345 607 2185 2184 F 263 0.00 1509 reject_low 109 ALIGNMENT 0 YS2-4j16.q1k chr09 146 165 2304 2311 F 20 0.00 1509 reject_low 246 ALIGNMENT 195 YS2-4j16.q1k chr05 344 34 575053 575363 C 311 88.42 1509 reject_low 53 ALIGNMENT 1008 YS2-4j16.p1k chr05 30 1179 572067 573223 F 1150 96.26 1366 ambiguous_tel 8 ALIGNMENT 0 YS2-4j16.q1k chr12 345 607 7554 7553 F 263 0.00 1509 reject_low 282 ALIGNMENT 0 YS2-4j16.q1k chr07 607 345 1089023 1089022 C 263 0.00 1509 reject_low 64 ALIGNMENT 0 YS2-4j16.q1k chr05 347 607 1952 1951 F 261 0.00 1509 reject_low 23 ALIGNMENT 0 YS2-4j16.q1k chr08 62 115 1651 1650 F 54 0.00 1509 reject_low 133 ALIGNMENT 0 YS2-4j16.q1k chr08 607 326 560741 560740 C 282 0.00 1509 reject_low 211 ALIGNMENT 53 YS2-4j16.p1k chr08 552 496 3685 3741 C 57 98.25 1366 reject_low 241 ALIGNMENT 0 YS2-4j16.q1k chr12 62 79 7398 7397 F 18 0.00 1509 reject_low 274 ALIGNMENT 0 YS2-4j16.q1k chr08 62 78 1866 1865 F 17 0.00 1509 reject_low 225 ALIGNMENT 148 YS2-4j16.q1k chr08 344 80 560505 560769 C 265 86.42 1509 reject_low 79 ALIGNMENT 0 YS2-4j16.q1k chr10 62 90 2004 2003 F 29 0.00 1509 reject_low 125 ALIGNMENT 0 YS2-4j16.q1k chr08 259 607 1937 1936 F 349 0.00 1509 reject_low 168 ALIGNMENT 0 YS2-4j16.q1k chr02 62 115 1486 1485 F 54 0.00 1509 reject_low 130 ALIGNMENT 138 YS2-4j16.q1k chr07 340 80 1089098 1089358 C 261 85.44 1509 reject_low 90 ALIGNMENT 0 YS2-4j16.q1k chr12 62 79 1755 1754 F 18 0.00 1509 reject_low 271 ALIGNMENT 0 YS2-4j16.q1k chr12 345 607 7590 7589 F 263 0.00 1509 reject_low 267 ALIGNMENT 0 YS2-4j16.q1k chr08 607 345 560614 560613 C 263 0.00 1509 reject_low 144 ALIGNMENT 0 YS2-4j16.q1k chr12 607 326 1076589 1076588 C 282 0.00 1509 reject_low 43 ALIGNMENT 0 YS2-4j16.q1k chr12 115 62 1070027 1070026 C 54 0.00 1509 reject_low 36 ALIGNMENT 0 YS2-4j16.q1k chr07 607 159 1088993 1088992 C 449 0.00 1509 reject_low 200 ALIGNMENT 0 YS2-4j16.q1k chr07 82 62 1089284 1089283 C 21 0.00 1509 reject_low 64 ALIGNMENT 0 YS2-4j16.q1k chr14 290 607 1711 1710 F 318 0.00 1509 reject_low 163 ALIGNMENT 0 YS2-4j16.q1k chr09 341 607 2126 2125 F 267 0.00 1509 reject_low 110 ALIGNMENT 0 YS2-4j16.q1k chr12 79 62 1076618 1076617 C 18 0.00 1509 reject_low 18 ALIGNMENT 33 YS2-4j16.q1k chr15 144 79 1089229 1089294 C 66 84.85 1509 reject_low 223 ALIGNMENT 118 YS2-4j16.q1k chr05 80 344 1614 1878 F 265 82.64 1509 reject_low 27 ALIGNMENT 24 YS2-4j16.p1k chr08 644 615 3639 3668 C 30 93.33 1366 reject_low 241 ALIGNMENT 0 YS2-4j16.q1k chr12 62 79 1827 1826 F 18 0.00 1509 reject_low 279 ALIGNMENT 0 YS2-4j16.q1k chr12 607 345 1069691 1069690 C 263 0.00 1509 reject_low 17 ALIGNMENT 41 YS2-4j16.q1k chr05 235 325 1481 1571 F 91 82.42 1509 reject_low 50 ALIGNMENT 0 YS2-4j16.q1k chr12 607 345 1076426 1076425 C 263 0.00 1509 reject_low 12 ALIGNMENT 77 YS2-4j16.q1k chr13 79 252 1918 2091 F 174 82.76 1509 reject_low 151 ALIGNMENT 0 YS2-4j16.q1k chr05 345 607 1806 1805 F 263 0.00 1509 reject_low 24 ALIGNMENT 0 YS2-4j16.q1k chr09 62 90 2165 2164 F 29 0.00 1509 reject_low 193 ALIGNMENT 77 YS2-4j16.q1k chr12 79 252 2042 2215 F 174 82.76 1509|0,9 reject_low 290 ALIGNMENT 0 YS2-4j16.q1k chr15 607 290 1089553 1089552 C 318 0.00 1509 reject_low 191 ALIGNMENT 76 YS2-4j16.q1k chr09 152 325 1686 1859 F 174 82.18 1509 reject_low 166 ALIGNMENT 0 YS2-4j16.q1k chr16 341 607 1779 1778 F 267 0.00 1509 reject_low 94 ALIGNMENT 53 YS2-4j16.q1k chr12 289 199 1076588 1076678 C 91 86.81 1509 reject_low 41 ALIGNMENT 47 YS2-4j16.q1k chr14 235 325 1585 1675 F 91 84.62 1509 reject_low 213 ALIGNMENT 0 YS2-4j16.q1k chr16 253 607 1907 1906 F 355 0.00 1509 reject_low 153 ALIGNMENT 0 YS2-4j16.q1k chr08 79 62 560770 560769 C 18 0.00 1509 reject_low 79 ALIGNMENT 0 YS2-4j16.q1k chr07 198 62 1089384 1089383 C 137 0.00 1509 reject_low 187 ALIGNMENT 155 YS2-4j16.q1k chr06 152 344 893 1085 F 193 94.30 1509 reject_low 77 ALIGNMENT 0 YS2-4j16.q1k chr16 62 234 1494 1493 F 173 0.00 1509 reject_low 215 ALIGNMENT 0 YS2-4j16.q1k chr05 607 159 574916 574915 C 449 0.00 1509 reject_low 199 ALIGNMENT 0 YS2-4j16.q1k chr16 345 607 1747 1746 F 263 0.00 1509 reject_low 58 ALIGNMENT 0 YS2-4j16.q1k chr12 78 62 1069776 1069775 C 17 0.00 1509 reject_low 38 ALIGNMENT 0 YS2-4j16.q1k chr12 326 607 1928 1927 F 282 0.00 1509 reject_low 268 ALIGNMENT 138 YS2-4j16.q1k chr04 340 80 1530192 1530452 C 261 85.44 1509 reject_low 88 ALIGNMENT 0 YS2-4j16.q1k chr02 62 82 1597 1596 F 21 0.00 1509 reject_low 120 ALIGNMENT 0 YS2-4j16.q1k chr12 90 62 1069800 1069799 C 29 0.00 1509 reject_low 19 ALIGNMENT 43 YS2-4j16.q1k chr12 91 158 2126 2193 F 68 89.71 1509|0,3 reject_low 291 ALIGNMENT 0 YS2-4j16.q1k chr07 607 330 1089326 1089325 C 278 0.00 1509 reject_low 232 ALIGNMENT 0 YS2-4j16.q1k chr14 62 82 1721 1720 F 21 0.00 1509 ambiguous_tel 2 ALIGNMENT 0 YS2-4j16.q1k chr13 62 115 1667 1666 F 54 0.00 1509 reject_low 145 ALIGNMENT 0 YS2-4j16.p1k chr12 860 772 9371 9370 C 89 0.00 1366 reject_low 251,267,270,273,274,278,282,283,285,287,288,290,291,292,293 ALIGNMENT 0 YS2-4j16.q1k chr10 341 607 1965 1964 F 267 0.00 1509 reject_low 205 ALIGNMENT 0 YS2-4j16.q1k chr08 135 607 1921 1920 F 473 0.00 1509 reject_low 225 ALIGNMENT 0 YS2-4j16.q1k chr15 607 289 1089230 1089229 C 319 0.00 1509 reject_low 119 ALIGNMENT 29 YS2-4j16.p1k chr08 697 665 3610 3642 C 33 96.97 1366 reject_low 241 ALIGNMENT 0 YS2-4j16.q1k chr10 237 607 2365 2364 F 371 0.00 1509 reject_low 247 ALIGNMENT 0 YS2-4j16.p1k chr12 718 698 3888 3877 C 21 0.00 1366 reject_low 250,268,269,271,272,275,276,277,279,280,281,284,286,289 ALIGNMENT 0 YS2-4j16.q1k chr16 62 115 1483 1482 F 54 0.00 1509 reject_low 148 ALIGNMENT 84 YS2-4j16.q1k chr12 344 116 1069798 1070026 C 229 79.91 1509 reject_low 36 ALIGNMENT 0 YS2-4j16.q1k chr09 62 78 2189 2188 F 17 0.00 1509 reject_low 179 ALIGNMENT 0 YS2-4j16.q1k chr12 82 62 1069880 1069879 C 21 0.00 1509 reject_low 9 ALIGNMENT 92 YS2-4j16.q1k chr05 116 325 1470 1679 F 210 82.38 1509 reject_low 30 ALIGNMENT 131 YS2-4j16.q1k chr16 91 288 1710 1907 F 198 89.90 1509 reject_low 116 ALIGNMENT 0 YS2-4j16.p1k chr13 860 772 3712 3711 C 89 0.00 1366 reject_low 252 ALIGNMENT 49 YS2-4j16.q1k chr10 91 308 2148 2365 F 218 75.23 1509 reject_low 194 ALIGNMENT 430 YS2-4j16.q1k chr04 837 83 1529586 1530341 C 755 87.28 1509 ambiguous_tel 0 ALIGNMENT 0 YS2-4j16.q1k chr12 341 607 1799 1798 F 267 0.00 1509 reject_low 286 ALIGNMENT 54 YS2-4j16.q1k chr06 260 344 893 977 F 85 88.24 1509 reject_low 171 ALIGNMENT 0 YS2-4j16.q1k chr02 62 78 1881 1880 F 17 0.00 1509 reject_low 137 ALIGNMENT 0 YS2-4j16.q1k chr12 151 62 1076690 1076689 C 90 0.00 1509 reject_low 39 ALIGNMENT 111 YS2-4j16.q1k chr08 152 348 1651 1847 F 197 86.29 1509 reject_low 126 ALIGNMENT 0 YS2-4j16.p1k chr12 664 645 9446 9441 C 20 0.00 1366 reject_low 251,267,270,273,274,278,282,283,285,287,288,290,291,292,293 ALIGNMENT 0 YS2-4j16.q1k chr15 90 62 1089319 1089318 C 29 0.00 1509 reject_low 203 ALIGNMENT 136 YS2-4j16.q1k chr10 97 344 1902 2149 F 248 85.89 1509 reject_low 104 ALIGNMENT 84 YS2-4j16.q1k chr12 116 344 7326 7554 F 229 79.91 1509 reject_low 282 ALIGNMENT 0 YS2-4j16.q1k chr08 607 159 560440 560439 C 449 0.00 1509 reject_low 227 ALIGNMENT 0 YS2-4j16.q1k chr02 62 79 1522 1521 F 18 0.00 1509 reject_low 78 ALIGNMENT 0 YS2-4j16.q1k chr09 62 115 1686 1685 F 54 0.00 1509 reject_low 131 ALIGNMENT 0 YS2-4j16.q1k chr08 607 345 560506 560505 C 263 0.00 1509 reject_low 79 ALIGNMENT 77 YS2-4j16.q1k chr12 79 252 7577 7750 F 174 82.76 1509 reject_low 283 ALIGNMENT 0 YS2-4j16.q1k chr05 79 62 575246 575245 C 18 0.00 1509 reject_low 96 ALIGNMENT 0 YS2-4j16.q1k chr08 607 341 560582 560581 C 267 0.00 1509 reject_low 59 ALIGNMENT 0 YS2-4j16.q1k chr07 234 62 1089384 1089383 C 173 0.00 1509 reject_low 209 ALIGNMENT 0 YS2-4j16.q1k chr15 607 217 1089230 1089229 C 391 0.00 1509 reject_low 183 ALIGNMENT 84 YS2-4j16.q1k chr05 344 116 575089 575317 C 229 79.91 1509 reject_low 142 ALIGNMENT 408 YS2-4j16.q1k chr02 91 777 2145 2837 F 687 87.63 1509 reject_low 265 ALIGNMENT 1016 YS2-4j16.p1k chr15 30 1205 1086403 1087589 F 1176 95.92 1366 ambiguous_tel 4 ALIGNMENT 0 YS2-4j16.q1k chr08 90 62 560507 560506 C 29 0.00 1509 reject_low 227 ALIGNMENT 0 YS2-4j16.q1k chr09 62 79 1758 1757 F 18 0.00 1509 reject_low 122 ALIGNMENT 0 YS2-4j16.q1k chr05 62 151 1470 1469 F 90 0.00 1509 reject_low 31 ALIGNMENT 146 YS2-4j16.q1k chr02 91 288 2217 2414 F 198 92.42 1509 reject_low 86 ALIGNMENT 0 YS2-4j16.q1k chr04 79 62 1530201 1530200 C 18 0.00 1509 reject_low 182 ALIGNMENT 0 YS2-4j16.q1k chr15 607 345 1089282 1089281 C 263 0.00 1509 reject_low 69 ALIGNMENT 0 YS2-4j16.q1k chr16 345 607 1819 1818 F 263 0.00 1509 reject_low 100 ALIGNMENT 0 YS2-4j16.q1k chr09 345 607 1950 1949 F 263 0.00 1509 reject_low 60 ALIGNMENT 195 YS2-4j16.q1k chr07 344 34 1089130 1089440 C 311 88.42 1509 reject_low 54 ALIGNMENT 0 YS2-4j16.q1k chr05 607 253 574894 574893 C 355 0.00 1509 reject_low 149 ALIGNMENT 0 YS2-4j16.q1k chr04 607 330 1530420 1530419 C 278 0.00 1509 reject_low 230 ALIGNMENT 0 YS2-4j16.q1k chr05 326 607 1715 1714 F 282 0.00 1509 reject_low 21 ALIGNMENT 0 YS2-4j16.q1k chr04 82 62 1530342 1530341 C 21 0.00 1509 ambiguous_tel 0 ALIGNMENT 197 YS2-4j16.q1k chr13 83 344 1778 2039 F 262 92.75 1509 reject_low 65 ALIGNMENT 82 YS2-4j16.q1k chr08 252 80 560417 560589 C 173 83.82 1509 reject_low 140 ALIGNMENT 431 YS2-4j16.q1k chr15 777 83 1088807 1089506 C 695 88.49 1509 ambiguous_tel 4 ALIGNMENT 131 YS2-4j16.q1k chr13 91 288 1894 2091 F 198 89.90 1509 reject_low 114 ALIGNMENT 670 YS2-4j16.p1k chr12 379 1205 1067125 1067962 F 827 94.20 1366 reject_low 9,11,12,13,14,15,16,17,18,19,20 ALIGNMENT 74 YS2-4j16.q1k chr15 252 79 1089229 1089402 C 174 82.18 1509 reject_low 157 ALIGNMENT 116 YS2-4j16.q1k chr09 91 346 2021 2276 F 256 82.81 1509 reject_low 124 ALIGNMENT 0 YS2-4j16.q1k chr05 62 234 1481 1480 F 173 0.00 1509 reject_low 50 ALIGNMENT 0 YS2-4j16.q1k chr06 62 80 1122 1121 F 19 0.00 1509 reject_low 245 ALIGNMENT 0 YS2-4j16.q1k chr12 62 90 2126 2125 F 29 0.00 1509 reject_low 291 ALIGNMENT 136 YS2-4j16.q1k chr13 80 344 1739 2003 F 265 84.91 1509 reject_low 98 ALIGNMENT 0 YS2-4j16.q1k chr09 62 234 1697 1696 F 173 0.00 1509 reject_low 172 ALIGNMENT 115 YS2-4j16.q1k chr05 80 329 1506 1755 F 250 83.20 1509 reject_low 28 ALIGNMENT 0 YS2-4j16.q1k chr14 345 607 1946 1945 F 263 0.00 1509 reject_low 66 ALIGNMENT 0 YS2-4j16.q1k chr16 290 607 1620 1619 F 318 0.00 1509 reject_low 165 ALIGNMENT 0 YS2-4j16.p1k chr12 614 553 9472 9487 C 62 0.00 1366 reject_low 251,267,270,273,274,278,282,283,285,287,288,290,291,292,293 ALIGNMENT 0 YS2-4j16.q1k chr05 607 145 574894 574893 C 463 0.00 1509 reject_low 219 ALIGNMENT 0 YS2-4j16.q1k chr02 62 79 2242 2241 F 18 0.00 1509 reject_low 139 ALIGNMENT 0 YS2-4j16.q1k chr12 79 62 1076402 1076401 C 18 0.00 1509 reject_low 48 ALIGNMENT 104 YS2-4j16.q1k chr02 75 325 1769 2019 F 251 81.67 1509 reject_low 121 ALIGNMENT 0 YS2-4j16.q1k chr12 208 207 2207 7345 F 0 0.00 1509 reject_low 292 ALIGNMENT 0 YS2-4j16.q1k chr05 62 79 1506 1505 F 18 0.00 1509 reject_low 28 ALIGNMENT 103 YS2-4j16.q1k chr16 344 150 946158 946352 C 195 85.13 1509 reject_low 256 ALIGNMENT 53 YS2-4j16.p1k chr12 552 496 9488 9544 C 57 98.25 1366 reject_low 251,267,270,273,274,278,282,283,285,287,288,290,291,292,293 ALIGNMENT 0 YS2-4j16.q1k chr09 62 151 1686 1685 F 90 0.00 1509 reject_low 166 ALIGNMENT 0 YS2-4j16.q1k chr13 62 82 1814 1813 F 21 0.00 1509 reject_low 252 ALIGNMENT 44 YS2-4j16.q1k chr02 80 216 2278 2414 F 137 78.83 1509 reject_low 196 ALIGNMENT 84 YS2-4j16.q1k chr14 116 344 1574 1802 F 229 79.91 1509 reject_low 146 ALIGNMENT 177 YS2-4j16.q1k chr09 34 344 1640 1950 F 311 86.50 1509 reject_low 60 ALIGNMENT 138 YS2-4j16.q1k chr13 80 340 1703 1963 F 261 85.44 1509 reject_low 91 ALIGNMENT 0 YS2-4j16.q1k chr08 82 62 560695 560694 C 21 0.00 1509 reject_low 264 ALIGNMENT 0 YS2-4j16.q1k chr12 79 62 1069955 1069954 C 18 0.00 1509 reject_low 17 ALIGNMENT 0 YS2-4j16.q1k chr09 62 90 2021 2020 F 29 0.00 1509 reject_low 124 ALIGNMENT 47 YS2-4j16.q1k chr08 260 340 1651 1731 F 81 86.42 1509 reject_low 195 ALIGNMENT 0 YS2-4j16.q1k chr06 345 607 941 940 F 263 0.00 1509 reject_low 217 ALIGNMENT 138 YS2-4j16.q1k chr05 340 80 575021 575281 C 261 85.44 1509 reject_low 89 ALIGNMENT 0 YS2-4j16.q1k chr12 62 82 7473 7472 F 21 0.00 1509 reject_low 251 ALIGNMENT 0 YS2-4j16.q1k chr07 79 62 1089323 1089322 C 18 0.00 1509 reject_low 97 ALIGNMENT 0 YS2-4j16.q1k chr12 234 62 1076679 1076678 C 173 0.00 1509 reject_low 43 ALIGNMENT 29 YS2-4j16.p1k chr12 697 665 3878 3910 C 33 96.97 1366 reject_low 250,268,269,271,272,275,276,277,279,280,281,284,286,289 ALIGNMENT 0 YS2-4j16.q1k chr02 217 607 2414 2413 F 391 0.00 1509 reject_low 196 ALIGNMENT 0 YS2-4j16.q1k chr04 198 62 1530478 1530477 C 137 0.00 1509 reject_low 185 ALIGNMENT 0 YS2-4j16.q1k chr15 115 62 1089654 1089653 C 54 0.00 1509 reject_low 147 ALIGNMENT 0 YS2-4j16.q1k chr09 341 607 1982 1981 F 267 0.00 1509 reject_low 106 ALIGNMENT 0 YS2-4j16.q1k chr16 607 289 945963 945962 C 319 0.00 1509 reject_low 253 ALIGNMENT 0 YS2-4j16.q1k chr14 62 234 1585 1584 F 173 0.00 1509 reject_low 213 ALIGNMENT 0 YS2-4j16.q1k chr09 62 79 1794 1793 F 18 0.00 1509 reject_low 70 ALIGNMENT 0 YS2-4j16.q1k chr12 607 290 1076553 1076552 C 318 0.00 1509 reject_low 39 ALIGNMENT 82 YS2-4j16.q1k chr02 80 252 2242 2414 F 173 83.82 1509 reject_low 139 ALIGNMENT 0 YS2-4j16.q1k chr10 62 96 1902 1901 F 35 0.00 1509 reject_low 104 ALIGNMENT 437 YS2-4j16.q1k chr05 777 83 574471 575170 C 695 88.78 1509 ambiguous_tel 8 ALIGNMENT 0 YS2-4j16.q1k chr09 62 90 1949 1948 F 29 0.00 1509 reject_low 108 ALIGNMENT 0 YS2-4j16.q1k chr12 607 159 1069625 1069624 C 449 0.00 1509 reject_low 42 ALIGNMENT 50 YS2-4j16.q1k chr14 80 216 1862 1998 F 137 80.29 1509 reject_low 176 ALIGNMENT 0 YS2-4j16.q1k chr09 326 607 2039 2038 F 282 0.00 1509 reject_low 70 ALIGNMENT 0 YS2-4j16.q1k chr12 62 115 7326 7325 F 54 0.00 1509 reject_low 282 ALIGNMENT 0 YS2-4j16.q1k chr14 62 115 1574 1573 F 54 0.00 1509 reject_low 146 ALIGNMENT 39 YS2-4j16.q1k chr12 329 260 1069957 1070026 C 70 85.71 1509 reject_low 49 ALIGNMENT 0 YS2-4j16.q1k chr10 341 607 2109 2108 F 267 0.00 1509 reject_low 136 ALIGNMENT 34 YS2-4j16.q1k chr06 166 236 1195 1265 F 71 83.10 1509 reject_low 245 ALIGNMENT 0 YS2-4j16.q1k chr09 62 79 1722 1721 F 18 0.00 1509 reject_low 106 ALIGNMENT 0 YS2-4j16.p1k chr08 772 860 558795 558794 F 89 0.00 1366 reject_low 264 ALIGNMENT 0 YS2-4j16.p1k chr13 614 553 3813 3828 C 62 0.00 1366 reject_low 252 ALIGNMENT 175 YS2-4j16.q1k chr05 80 344 1650 1914 F 265 89.81 1509 reject_low 22 ALIGNMENT 0 YS2-4j16.q1k chr13 62 90 1894 1893 F 29 0.00 1509 reject_low 114 ALIGNMENT 0 YS2-4j16.q1k chr02 62 79 1918 1917 F 18 0.00 1509 reject_low 83 ALIGNMENT 434 YS2-4j16.q1k chr12 83 838 7473 8229 F 756 87.43 1509 reject_low 251 ALIGNMENT 0 YS2-4j16.q1k chr12 78 62 1069668 1069667 C 17 0.00 1509 reject_low 44 ALIGNMENT 0 YS2-4j16.q1k chr15 607 326 1089553 1089552 C 282 0.00 1509 reject_low 214 ALIGNMENT 0 YS2-4j16.q1k chr16 62 79 1519 1518 F 18 0.00 1509 reject_low 94 ALIGNMENT 194 YS2-4j16.q1k chr12 344 83 1076317 1076578 C 262 92.37 1509 reject_low 14 ALIGNMENT 0 YS2-4j16.q1k chr16 607 326 946250 946249 C 282 0.00 1509 reject_low 263 ALIGNMENT 0 YS2-4j16.q1k chr16 62 82 1594 1593 F 21 0.00 1509 reject_low 67 ALIGNMENT 0 YS2-4j16.q1k chr09 341 607 2090 2089 F 267 0.00 1509 reject_low 101 ALIGNMENT 53 YS2-4j16.p1k chr02 552 496 4154 4210 C 57 98.25 1366 reject_low 265 ALIGNMENT 0 YS2-4j16.q1k chr16 79 62 946351 946350 C 18 0.00 1509 reject_low 254 ALIGNMENT 47 YS2-4j16.q1k chr12 325 235 1069925 1070015 C 91 84.62 1509|0,9 reject_low 46 ALIGNMENT 0 YS2-4j16.q1k chr15 607 341 1089358 1089357 C 267 0.00 1509 reject_low 93 ALIGNMENT 0 YS2-4j16.q1k chr05 259 62 575318 575317 C 198 0.00 1509 reject_low 231 ALIGNMENT 0 YS2-4j16.q1k chr13 62 198 1678 1677 F 137 0.00 1509 reject_low 189 ALIGNMENT 0 YS2-4j16.q1k chr12 155 156 1070023 1076289 C 0 0.00 1509 reject_low 47 ALIGNMENT 0 YS2-4j16.q1k chr05 62 79 1686 1685 F 18 0.00 1509 reject_low 23 ALIGNMENT 0 YS2-4j16.q1k chr09 269 607 2378 2377 F 339 0.00 1509 reject_low 179 ALIGNMENT 0 YS2-4j16.q1k chr16 78 62 946136 946135 C 17 0.00 1509 reject_low 257 ALIGNMENT 0 YS2-4j16.q1k chr04 234 62 1530478 1530477 C 173 0.00 1509 reject_low 207 ALIGNMENT 0 YS2-4j16.q1k chr06 269 607 1261 1260 F 339 0.00 1509 reject_low 178 ALIGNMENT 29 YS2-4j16.q1k chr09 260 289 1686 1715 F 30 100.00 1509|0,8 reject_low 248 ALIGNMENT 39 YS2-4j16.q1k chr13 260 329 1667 1736 F 70 85.71 1509 reject_low 234 ALIGNMENT 33 YS2-4j16.q1k chr12 79 144 7685 7750 F 66 84.85 1509 reject_low 288 ALIGNMENT 50 YS2-4j16.q1k chr09 79 268 2189 2378 F 190 76.84 1509 reject_low 179 ALIGNMENT 33 YS2-4j16.q1k chr14 79 144 1933 1998 F 66 84.85 1509 reject_low 222 ALIGNMENT 0 YS2-4j16.q1k chr09 347 607 2240 2239 F 261 0.00 1509 reject_low 80 ALIGNMENT 0 YS2-4j16.p1k chr02 718 698 4089 4078 C 21 0.00 1366 reject_low 265 ALIGNMENT 143 YS2-4j16.q1k chr10 80 266 2029 2215 F 187 93.58 1509 reject_low 243 ALIGNMENT 0 YS2-4j16.q1k chr02 62 90 1677 1676 F 29 0.00 1509 reject_low 75 ALIGNMENT 50 YS2-4j16.q1k chr16 80 216 1771 1907 F 137 80.29 1509 reject_low 177 ALIGNMENT 0 YS2-4j16.q1k chr14 159 607 1976 1975 F 449 0.00 1509 reject_low 202 ALIGNMENT 43 YS2-4j16.q1k chr14 91 158 1909 1976 F 68 89.71 1509 reject_low 202 ALIGNMENT 39 YS2-4j16.q1k chr04 329 260 1530419 1530488 C 70 85.71 1509 reject_low 230 ALIGNMENT 0 YS2-4j16.q1k chr10 62 80 2222 2221 F 19 0.00 1509 reject_low 247 ALIGNMENT 0 YS2-4j16.q1k chr12 62 115 1683 1682 F 54 0.00 1509 reject_low 280 ALIGNMENT 0 YS2-4j16.q1k chr05 607 345 574946 574945 C 263 0.00 1509 reject_low 63 ALIGNMENT 0 YS2-4j16.q1k chr12 198 62 1076679 1076678 C 137 0.00 1509 reject_low 41 ALIGNMENT 0 YS2-4j16.q1k chr10 146 165 2287 2294 F 20 0.00 1509 reject_low 247 ALIGNMENT 0 YS2-4j16.q1k chr04 607 145 1530065 1530064 C 463 0.00 1509 reject_low 218 ALIGNMENT 0 YS2-4j16.p1k chr13 718 698 3764 3753 C 21 0.00 1366 reject_low 252 ALIGNMENT 141 YS2-4j16.q1k chr02 34 289 1440 1695 F 256 85.94 1509 reject_low 61 ALIGNMENT 29 YS2-4j16.p1k chr02 697 665 4079 4111 C 33 96.97 1366 reject_low 265 ALIGNMENT 77 YS2-4j16.q1k chr15 289 152 1089516 1089653 C 138 86.23 1509 reject_low 164 ALIGNMENT 352 YS2-4j16.q1k chr06 80 840 1001 1733 F 761 84.36 1509 reject_low 266 ALIGNMENT 0 YS2-4j16.q1k chr05 326 607 1679 1678 F 282 0.00 1509 reject_low 30 ALIGNMENT 35 YS2-4j16.q1k chr16 325 235 946249 946339 C 91 80.22 1509 reject_low 263 ALIGNMENT 77 YS2-4j16.q1k chr14 152 289 1574 1711 F 138 86.23 1509 reject_low 163 ALIGNMENT 0 YS2-4j16.q1k chr12 207 208 1070007 1076273 C 0 0.00 1509 reject_low 48 ALIGNMENT 0 YS2-4j16.q1k chr07 607 217 1088971 1088970 C 391 0.00 1509 reject_low 174 ALIGNMENT 136 YS2-4j16.q1k chr16 80 344 1555 1819 F 265 84.91 1509 reject_low 100 ALIGNMENT 84 YS2-4j16.q1k chr07 344 116 1089166 1089394 C 229 79.91 1509 reject_low 143 ALIGNMENT 436 YS2-4j16.q1k chr05 91 838 1805 2541 F 748 87.57 1509 reject_low 10 ALIGNMENT 0 YS2-4j16.q1k chr13 62 234 1678 1677 F 173 0.00 1509 reject_low 212 ALIGNMENT 0 YS2-4j16.q1k chr15 607 290 1089517 1089516 C 318 0.00 1509 reject_low 164 ALIGNMENT 0 YS2-4j16.q1k chr12 345 607 2055 2054 F 263 0.00 1509 reject_low 275 ALIGNMENT 0 YS2-4j16.q1k chr12 607 345 1069763 1069762 C 263 0.00 1509 reject_low 11 ALIGNMENT 0 YS2-4j16.q1k chr12 78 62 1076439 1076438 C 17 0.00 1509 reject_low 46 ALIGNMENT 0 YS2-4j16.q1k chr08 607 326 560561 560560 C 282 0.00 1509 reject_low 128 ALIGNMENT 0 YS2-4j16.q1k chr02 62 151 1486 1485 F 90 0.00 1509 reject_low 138 ALIGNMENT 53 YS2-4j16.q1k chr07 289 199 1089293 1089383 C 91 86.81 1509 reject_low 187 ALIGNMENT 128 YS2-4j16.q1k chr12 288 91 1069602 1069799 C 198 89.39 1509 reject_low 19 ALIGNMENT 0 YS2-4j16.q1k chr02 326 607 1767 1766 F 282 0.00 1509 reject_low 78 ALIGNMENT 0 YS2-4j16.q1k chr14 217 607 1998 1997 F 391 0.00 1509 reject_low 176 ALIGNMENT 53 YS2-4j16.q1k chr02 199 289 1497 1587 F 91 86.81 1509 reject_low 184 ALIGNMENT 0 YS2-4j16.q1k chr09 62 79 1830 1829 F 18 0.00 1509 reject_low 101 ALIGNMENT 53 YS2-4j16.q1k chr05 79 236 1901 2058 F 158 79.11 1509 reject_low 35 ALIGNMENT 24 YS2-4j16.p1k chr12 644 615 3907 3936 C 30 93.33 1366 reject_low 250,268,269,271,272,275,276,277,279,280,281,284,286,289 ALIGNMENT 0 YS2-4j16.q1k chr06 62 115 893 892 F 54 0.00 1509 reject_low 127 ALIGNMENT 0 YS2-4j16.q1k chr15 82 62 1089507 1089506 C 21 0.00 1509 ambiguous_tel 4 ALIGNMENT 99 YS2-4j16.q1k chr08 116 344 1651 1879 F 229 82.10 1509 reject_low 133 ALIGNMENT 0 YS2-4j16.q1k chr07 607 290 1089294 1089293 C 318 0.00 1509 reject_low 187 ALIGNMENT 53 YS2-4j16.q1k chr13 199 289 1678 1768 F 91 86.81 1509 reject_low 189 ALIGNMENT 0 YS2-4j16.q1k chr08 607 217 560418 560417 C 391 0.00 1509 reject_low 197 ALIGNMENT 0 YS2-4j16.q1k chr12 607 290 1069926 1069925 C 318 0.00 1509 reject_low 48 ALIGNMENT 197 YS2-4j16.q1k chr05 344 83 574945 575206 C 262 92.75 1509 reject_low 63 ALIGNMENT 0 YS2-4j16.q1k chr02 62 79 1630 1629 F 18 0.00 1509 reject_low 85 ALIGNMENT 0 YS2-4j16.q1k chr15 90 62 1089427 1089426 C 29 0.00 1509 reject_low 119 ALIGNMENT 197 YS2-4j16.q1k chr12 83 344 7437 7698 F 262 92.75 1509 reject_low 270 ALIGNMENT 0 YS2-4j16.q1k chr08 345 607 1807 1806 F 263 0.00 1509 reject_low 167 ALIGNMENT 43 YS2-4j16.q1k chr12 158 91 1069624 1069691 C 68 89.71 1509 reject_low 42 ALIGNMENT 148 YS2-4j16.q1k chr05 80 344 1542 1806 F 265 86.42 1509 reject_low 24 ALIGNMENT 0 YS2-4j16.p1k chr05 378 364 4559 4554 C 15 0.00 1366 reject_low 10,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35 ALIGNMENT 43 YS2-4j16.q1k chr16 91 158 1818 1885 F 68 89.71 1509 reject_low 204 ALIGNMENT 194 YS2-4j16.q1k chr15 344 83 1089281 1089542 C 262 92.37 1509 reject_low 69 ALIGNMENT 0 YS2-4j16.p1k chr16 645 664 944271 944266 F 20 0.00 1366 reject_low 240,244,249,253,254,255,256,257,258,259,260,261,262,263 ALIGNMENT 108 YS2-4j16.q1k chr12 116 329 1683 1896 F 214 84.58 1509 reject_low 280 ALIGNMENT 74 YS2-4j16.q1k chr04 252 79 1530064 1530237 C 174 82.18 1509 reject_low 156 ALIGNMENT 0 YS2-4j16.q1k chr13 62 79 1955 1954 F 18 0.00 1509 reject_low 175 ALIGNMENT 0 YS2-4j16.q1k chr14 345 607 1910 1909 F 263 0.00 1509 reject_low 99 ALIGNMENT 0 YS2-4j16.p1k chr16 772 860 944342 944341 F 89 0.00 1366 reject_low 240,244,249,253,254,255,256,257,258,259,260,261,262,263 ALIGNMENT 0 YS2-4j16.q1k chr14 330 607 1643 1642 F 278 0.00 1509 reject_low 235 ALIGNMENT 50 YS2-4j16.q1k chr16 216 80 945962 946098 C 137 80.29 1509 reject_low 260 ALIGNMENT 0 YS2-4j16.q1k chr09 62 79 2046 2045 F 18 0.00 1509 reject_low 242 ALIGNMENT 0 YS2-4j16.q1k chr04 607 289 1530065 1530064 C 319 0.00 1509 reject_low 118 ALIGNMENT 0 YS2-4j16.q1k chr16 62 79 1771 1770 F 18 0.00 1509 reject_low 177 ALIGNMENT 84 YS2-4j16.q1k chr04 344 116 1530260 1530488 C 229 79.91 1509 reject_low 141 ALIGNMENT 0 YS2-4j16.q1k chr15 151 62 1089654 1089653 C 90 0.00 1509 reject_low 164 ALIGNMENT 132 YS2-4j16.q1k chr10 91 344 1932 2185 F 254 85.04 1509 reject_low 109 ALIGNMENT 0 YS2-4j16.q1k chr13 62 79 1703 1702 F 18 0.00 1509 reject_low 91 ALIGNMENT 133 YS2-4j16.q1k chr12 80 344 1791 2055 F 265 84.53 1509 reject_low 275 ALIGNMENT 0 YS2-4j16.q1k chr15 607 345 1089426 1089425 C 263 0.00 1509 reject_low 147 ALIGNMENT 132 YS2-4j16.q1k chr09 91 344 1949 2202 F 254 85.04 1509 reject_low 108 ALIGNMENT 437 YS2-4j16.q1k chr14 83 838 1721 2477 F 756 87.57 1509 ambiguous_tel 2 ALIGNMENT 0 YS2-4j16.q1k chr07 90 62 1089168 1089167 C 29 0.00 1509 reject_low 113 ALIGNMENT 0 YS2-4j16.q1k chr08 341 607 1731 1730 F 267 0.00 1509 reject_low 195 ALIGNMENT 0 YS2-4j16.q1k chr12 79 62 1069991 1069990 C 18 0.00 1509 reject_low 15 ALIGNMENT 0 YS2-4j16.q1k chr12 156 155 2191 7329 F 0 0.00 1509 reject_low 291 ALIGNMENT 0 YS2-4j16.q1k chr16 62 82 1630 1629 F 21 0.00 1509 ambiguous_tel 5 ALIGNMENT 33 YS2-4j16.q1k chr16 144 79 945962 946027 C 66 84.85 1509 reject_low 262 ALIGNMENT 0 YS2-4j16.q1k chr02 62 198 1497 1496 F 137 0.00 1509 reject_low 184 ALIGNMENT 0 YS2-4j16.q1k chr02 326 607 1695 1694 F 282 0.00 1509 reject_low 130 ALIGNMENT 0 YS2-4j16.q1k chr16 62 78 1734 1733 F 17 0.00 1509 reject_low 153 ALIGNMENT 23 YS2-4j16.q1k chr10 81 145 2222 2286 F 65 80.00 1509 reject_low 247 ALIGNMENT 77 YS2-4j16.q1k chr05 289 152 575180 575317 C 138 86.23 1509 reject_low 159 ALIGNMENT 0 YS2-4j16.q1k chr02 345 607 1894 1893 F 263 0.00 1509 reject_low 85 ALIGNMENT 0 YS2-4j16.q1k chr14 345 607 1838 1837 F 263 0.00 1509 reject_low 56 ALIGNMENT 0 YS2-4j16.p1k chr08 645 664 558724 558719 F 20 0.00 1366 reject_low 264 ALIGNMENT 77 YS2-4j16.q1k chr14 79 252 1825 1998 F 174 82.76 1509 reject_low 152 ALIGNMENT 0 YS2-4j16.p1k chr08 614 553 3669 3684 C 62 0.00 1366 reject_low 241 ALIGNMENT 0 YS2-4j16.q1k chr02 345 607 2362 2361 F 263 0.00 1509 reject_low 73 ALIGNMENT 53 YS2-4j16.q1k chr12 289 199 1069925 1070015 C 91 86.81 1509|0,9 reject_low 48 ALIGNMENT 0 YS2-4j16.q1k chr16 62 259 1483 1482 F 198 0.00 1509 reject_low 237 ALIGNMENT 0 YS2-4j16.q1k chr05 62 78 1901 1900 F 17 0.00 1509 reject_low 35 ALIGNMENT 20 YS2-4j16.q1k chr09 274 348 2252 2326 F 75 76.00 1509|8,0 reject_low 242,248 ALIGNMENT 47 YS2-4j16.q1k chr16 235 325 1494 1584 F 91 84.62 1509 reject_low 215 ALIGNMENT 123 YS2-4j16.q1k chr16 340 80 946090 946350 C 261 83.52 1509 reject_low 254 ALIGNMENT 0 YS2-4j16.q1k chr12 607 345 1076462 1076461 C 263 0.00 1509 reject_low 37 ALIGNMENT 0 YS2-4j16.q1k chr02 345 607 2146 2145 F 263 0.00 1509 reject_low 137 ALIGNMENT 136 YS2-4j16.q1k chr05 344 80 574981 575245 C 265 84.91 1509 reject_low 96 ALIGNMENT 0 YS2-4j16.q1k chr09 345 607 2166 2165 F 263 0.00 1509 reject_low 71 ALIGNMENT 94 YS2-4j16.q1k chr10 80 344 2065 2329 F 265 79.62 1509 reject_low 135 ALIGNMENT 0 YS2-4j16.q1k chr12 607 345 1076354 1076353 C 263 0.00 1509 reject_low 18 ALIGNMENT 34 YS2-4j16.q1k chr09 166 236 2312 2382 F 71 83.10 1509 reject_low 246 ALIGNMENT 138 YS2-4j16.q1k chr12 340 80 1076393 1076653 C 261 85.44 1509 reject_low 16 ALIGNMENT 0 YS2-4j16.q1k chr08 90 62 560615 560614 C 29 0.00 1509 reject_low 87 ALIGNMENT 194 YS2-4j16.q1k chr12 344 83 1069654 1069915 C 262 92.37 1509 reject_low 13 ALIGNMENT 24 YS2-4j16.p1k chr02 644 615 4108 4137 C 30 93.33 1366 reject_low 265 ALIGNMENT 0 YS2-4j16.q1k chr02 335 607 1668 1667 F 273 0.00 1509 reject_low 138 ALIGNMENT 0 YS2-4j16.q1k chr05 62 115 1470 1469 F 54 0.00 1509 reject_low 30 ALIGNMENT 0 YS2-4j16.q1k chr12 290 607 1928 1927 F 318 0.00 1509 reject_low 276 ALIGNMENT 0 YS2-4j16.q1k chr12 62 78 7685 7684 F 17 0.00 1509 reject_low 288 ALIGNMENT 0 YS2-4j16.q1k chr12 62 79 1719 1718 F 18 0.00 1509 reject_low 276 ALIGNMENT 37 YS2-4j16.q1k chr08 158 91 560439 560506 C 68 86.76 1509 reject_low 227 ALIGNMENT 84 YS2-4j16.q1k chr12 344 116 1076461 1076689 C 229 79.91 1509 reject_low 37 ALIGNMENT 0 YS2-4j16.q1k chr13 62 78 1918 1917 F 17 0.00 1509 reject_low 151 ALIGNMENT 0 YS2-4j16.q1k chr02 345 607 1966 1965 F 263 0.00 1509 reject_low 76 ALIGNMENT 33 YS2-4j16.q1k chr12 144 79 1069602 1069667 C 66 84.85 1509 reject_low 44 ALIGNMENT 0 YS2-4j16.q1k chr12 244 243 2207 7345 F 0 0.00 1509 reject_low 290 ALIGNMENT 0 YS2-4j16.q1k chr12 607 330 1069958 1069957 C 278 0.00 1509 reject_low 49 ALIGNMENT 197 YS2-4j16.q1k chr16 83 344 1594 1855 F 262 92.75 1509 reject_low 67 ALIGNMENT 0 YS2-4j16.q1k chr06 345 607 1085 1084 F 263 0.00 1509 reject_low 77 ALIGNMENT 106 YS2-4j16.q1k chr10 205 325 1902 2022 F 121 96.69 1509 reject_low 132 ALIGNMENT 0 YS2-4j16.q1k chr16 62 78 1842 1841 F 17 0.00 1509 reject_low 224 ALIGNMENT 0 YS2-4j16.q1k chr02 347 607 2004 2003 F 261 0.00 1509 reject_low 72 ALIGNMENT 0 YS2-4j16.q1k chr05 607 345 575054 575053 C 263 0.00 1509 reject_low 53 ALIGNMENT 0 YS2-4j16.p1k chr12 664 645 3911 3906 C 20 0.00 1366 reject_low 250,268,269,271,272,275,276,277,279,280,281,284,286,289 ALIGNMENT 0 YS2-4j16.p1k chr08 495 62 3742 3741 C 434 0.00 1366 reject_low 241 ALIGNMENT 23 YS2-4j16.q1k chr06 81 145 1122 1186 F 65 80.00 1509 reject_low 245 ALIGNMENT 0 YS2-4j16.q1k chr04 607 217 1530065 1530064 C 391 0.00 1509 reject_low 182 ALIGNMENT 147 YS2-4j16.q1k chr02 80 340 1918 2178 F 261 86.59 1509 reject_low 83 ALIGNMENT 82 YS2-4j16.q1k chr10 169 340 1902 2073 F 172 83.14 1509 reject_low 154 ALIGNMENT 0 YS2-4j16.q1k chr06 62 259 893 892 F 198 0.00 1509 reject_low 171 ALIGNMENT 227 YS2-4j16.p1k chr12 30 270 1066855 1067095 F 241 98.34 1366 reject_low 9,11,12,13,14,15,16,17,18,19,20,36,37,38,39,40,41,42,43,44,45,46,47,48,49 ALIGNMENT 53 YS2-4j16.q1k chr16 199 289 1494 1584 F 91 86.81 1509 reject_low 192 ALIGNMENT 0 YS2-4j16.q1k chr12 326 607 1820 1819 F 282 0.00 1509 reject_low 284 ALIGNMENT 0 YS2-4j16.q1k chr10 347 607 2259 2258 F 261 0.00 1509 reject_low 125 ALIGNMENT 0 YS2-4j16.p1k chr12 495 62 4010 4009 C 434 0.00 1366 reject_low 250,268,269,271,272,275,276,277,279,280,281,284,286,289 ALIGNMENT 0 YS2-4j16.q1k chr05 607 326 575217 575216 C 282 0.00 1509 reject_low 208 ALIGNMENT 0 YS2-4j16.q1k chr05 82 62 575171 575170 C 21 0.00 1509 ambiguous_tel 8 ALIGNMENT 0 YS2-4j16.q1k chr08 115 62 560842 560841 C 54 0.00 1509 reject_low 144 ALIGNMENT 39 YS2-4j16.q1k chr15 329 260 1089584 1089653 C 70 85.71 1509 reject_low 236 ALIGNMENT 114 YS2-4j16.q1k chr08 325 80 560560 560805 C 246 83.33 1509 reject_low 128 ALIGNMENT 0 YS2-4j16.q1k chr14 62 79 1862 1861 F 18 0.00 1509 reject_low 176 ALIGNMENT 0 YS2-4j16.q1k chr12 78 62 1076331 1076330 C 17 0.00 1509 reject_low 49 ALIGNMENT 0 YS2-4j16.q1k chr08 90 62 560471 560470 C 29 0.00 1509 reject_low 239 ALIGNMENT 0 YS2-4j16.q1k chr10 62 90 2148 2147 F 29 0.00 1509 reject_low 194 ALIGNMENT 29 YS2-4j16.p1k chr12 329 363 1067094 1067128 F 35 94.29 1366 reject_low 9,11,12,13,14,15,16,17,18,19,20,36,37,38,39,40,41,42,43,44,45,46,47,48,49 ALIGNMENT 0 YS2-4j16.q1k chr12 607 217 1069603 1069602 C 391 0.00 1509 reject_low 40 ALIGNMENT 0 YS2-4j16.q1k chr08 159 607 1909 1908 F 449 0.00 1509 reject_low 216 ALIGNMENT 0 YS2-4j16.p1k chr06 860 772 2873 2872 C 89 0.00 1366 reject_low 266 ALIGNMENT 0 YS2-4j16.q1k chr04 607 326 1530388 1530387 C 282 0.00 1509 reject_low 207 ALIGNMENT 0 YS2-4j16.q1k chr02 62 79 1558 1557 F 18 0.00 1509 reject_low 95 ALIGNMENT 0 YS2-4j16.q1k chr12 62 90 2018 2017 F 29 0.00 1509 reject_low 277 ALIGNMENT 0 YS2-4j16.q1k chr16 90 62 946052 946051 C 29 0.00 1509 reject_low 261 ALIGNMENT 0 YS2-4j16.q1k chr10 62 204 1902 1901 F 143 0.00 1509 reject_low 132 ALIGNMENT 0 YS2-4j16.q1k chr16 607 345 946159 946158 C 263 0.00 1509 reject_low 256 ALIGNMENT 195 YS2-4j16.q1k chr12 344 34 1069762 1070072 C 311 88.42 1509 reject_low 11 ALIGNMENT 53 YS2-4j16.p1k chr06 552 496 2990 3046 C 57 98.25 1366 reject_low 266 ALIGNMENT 0 YS2-4j16.q1k chr12 341 607 2087 2086 F 267 0.00 1509 reject_low 279 ALIGNMENT 0 YS2-4j16.q1k chr12 341 607 7622 7621 F 267 0.00 1509 reject_low 273 ALIGNMENT 0 YS2-4j16.q1k chr12 607 345 1069799 1069798 C 263 0.00 1509 reject_low 36 ALIGNMENT 151 YS2-4j16.q1k chr12 80 344 1755 2019 F 265 86.79 1509 reject_low 271 ALIGNMENT 40 YS2-4j16.q1k chr12 260 325 1683 1748 F 66 87.88 1509 reject_low 289 ALIGNMENT 0 YS2-4j16.q1k chr02 62 79 2278 2277 F 18 0.00 1509 reject_low 196 ALIGNMENT 0 YS2-4j16.q1k chr05 607 217 574894 574893 C 391 0.00 1509 reject_low 173 ALIGNMENT 0 YS2-4j16.q1k chr16 290 607 1584 1583 F 318 0.00 1509 reject_low 192 ALIGNMENT 37 YS2-4j16.q1k chr08 91 185 1806 1900 F 95 81.05 1509 reject_low 228 ALIGNMENT 128 YS2-4j16.q1k chr04 288 91 1530064 1530261 C 198 89.39 1509 reject_low 118 ALIGNMENT 64 YS2-4j16.q1k chr05 80 308 1830 2058 F 229 77.29 1509 reject_low 33 ALIGNMENT 0 YS2-4j16.q1k chr14 62 90 1909 1908 F 29 0.00 1509 reject_low 202 ALIGNMENT 116 YS2-4j16.q1k chr10 91 346 2004 2259 F 256 82.81 1509 reject_low 125 ALIGNMENT 0 YS2-4j16.q1k chr05 607 345 574982 574981 C 263 0.00 1509 reject_low 96 ALIGNMENT 53 YS2-4j16.q1k chr08 289 199 560740 560830 C 91 86.81 1509 reject_low 188 ALIGNMENT 0 YS2-4j16.q1k chr16 62 90 1710 1709 F 29 0.00 1509 reject_low 116 ALIGNMENT 0 YS2-4j16.q1k chr12 62 78 2042 2041 F 17 0.00 1509 reject_low 290 ALIGNMENT 0 YS2-4j16.q1k chr16 90 62 946160 946159 C 29 0.00 1509 reject_low 253 ALIGNMENT 0 YS2-4j16.q1k chr13 145 607 2091 2090 F 463 0.00 1509 reject_low 221 ALIGNMENT 0 YS2-4j16.q1k chr15 198 62 1089643 1089642 C 137 0.00 1509 reject_low 191 ALIGNMENT 194 YS2-4j16.q1k chr04 344 83 1530116 1530377 C 262 92.37 1509 reject_low 68 ALIGNMENT 0 YS2-4j16.q1k chr08 607 290 560705 560704 C 318 0.00 1509 reject_low 161 ALIGNMENT 138 YS2-4j16.q1k chr14 80 340 1610 1870 F 261 85.44 1509 reject_low 92 ALIGNMENT 29 YS2-4j16.p1k chr05 363 329 4555 4589 C 35 94.29 1366 reject_low 10,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,50,51 ALIGNMENT 0 YS2-4j16.q1k chr07 607 289 1088971 1088970 C 319 0.00 1509 reject_low 113 ALIGNMENT 0 YS2-4j16.q1k chr15 79 62 1089582 1089581 C 18 0.00 1509 reject_low 103 ALIGNMENT 0 YS2-4j16.q1k chr05 62 259 1470 1469 F 198 0.00 1509 reject_low 51 ALIGNMENT 104 YS2-4j16.q1k chr09 116 325 1686 1895 F 210 84.29 1509 reject_low 131 ALIGNMENT 0 YS2-4j16.p1k chr16 62 495 944168 944167 F 434 0.00 1366 reject_low 240,244,249,253,254,255,256,257,258,259,260,261,262,263 ALIGNMENT 50 YS2-4j16.p1k chr12 771 719 3835 3887 C 53 98.11 1366 reject_low 250,268,269,271,272,275,276,277,279,280,281,284,286,289 ALIGNMENT 0 YS2-4j16.q1k chr06 62 79 1001 1000 F 18 0.00 1509 reject_low 266 ALIGNMENT 0 YS2-4j16.q1k chr08 79 62 560590 560589 C 18 0.00 1509 reject_low 140 ALIGNMENT 144 YS2-4j16.q1k chr09 80 346 1974 2240 F 267 85.77 1509 reject_low 80 ALIGNMENT 123 YS2-4j16.q1k chr05 80 340 1578 1838 F 261 83.52 1509 reject_low 26 ALIGNMENT 197 YS2-4j16.q1k chr14 83 344 1685 1946 F 262 92.75 1509 reject_low 66 ALIGNMENT 136 YS2-4j16.q1k chr07 344 80 1089058 1089322 C 265 84.91 1509 reject_low 97 ALIGNMENT 0 YS2-4j16.q1k chr13 290 607 1768 1767 F 318 0.00 1509 reject_low 189 ALIGNMENT 135 YS2-4j16.q1k chr09 80 340 1830 2090 F 261 85.06 1509 reject_low 101 ALIGNMENT 0 YS2-4j16.q1k chr10 349 607 2309 2308 F 259 0.00 1509 reject_low 243 ALIGNMENT 0 YS2-4j16.q1k chr15 607 330 1089585 1089584 C 278 0.00 1509 reject_low 236 ALIGNMENT 0 YS2-4j16.q1k chr05 62 90 1877 1876 F 29 0.00 1509 reject_low 34 ALIGNMENT 0 YS2-4j16.q1k chr12 326 607 7427 7426 F 282 0.00 1509 reject_low 290 ALIGNMENT 0 YS2-4j16.q1k chr16 62 90 1818 1817 F 29 0.00 1509 reject_low 204 ALIGNMENT 0 YS2-4j16.q1k chr14 345 607 1802 1801 F 263 0.00 1509 reject_low 146 ALIGNMENT 74 YS2-4j16.q1k chr12 252 79 1069602 1069775 C 174 82.18 1509 reject_low 38 ALIGNMENT 71 YS2-4j16.q1k chr08 199 344 1662 1807 F 146 83.56 1509 reject_low 167 ALIGNMENT 0 YS2-4j16.q1k chr10 269 607 2361 2360 F 339 0.00 1509 reject_low 180 ALIGNMENT 0 YS2-4j16.q1k chr10 345 607 2149 2148 F 263 0.00 1509 reject_low 104 ALIGNMENT 33 YS2-4j16.q1k chr13 79 144 2026 2091 F 66 84.85 1509 reject_low 221 ALIGNMENT 0 YS2-4j16.q1k chr09 326 607 1895 1894 F 282 0.00 1509 reject_low 131 ALIGNMENT 0 YS2-4j16.q1k chr13 159 607 2069 2068 F 449 0.00 1509 reject_low 201 ALIGNMENT 0 YS2-4j16.q1k chr13 62 79 1739 1738 F 18 0.00 1509 reject_low 98 ALIGNMENT 0 YS2-4j16.q1k chr15 78 62 1089403 1089402 C 17 0.00 1509 reject_low 157 ALIGNMENT 32 YS2-4j16.q1k chr08 79 134 1866 1921 F 56 87.50 1509 reject_low 225 ALIGNMENT 0 YS2-4j16.p1k chr12 364 378 1067129 1067124 F 15 0.00 1366 reject_low 9,11,12,13,14,15,16,17,18,19,20 ALIGNMENT 0 YS2-4j16.q1k chr12 607 289 1076266 1076265 C 319 0.00 1509 reject_low 20 ALIGNMENT 0 YS2-4j16.p1k chr02 860 772 4037 4036 C 89 0.00 1366 reject_low 265 ALIGNMENT 0 YS2-4j16.q1k chr14 145 607 1998 1997 F 463 0.00 1509 reject_low 222 ALIGNMENT 167 YS2-4j16.q1k chr08 344 83 560469 560730 C 262 88.93 1509 reject_low 74 ALIGNMENT 50 YS2-4j16.p1k chr02 771 719 4036 4088 C 53 98.11 1366 reject_low 265 ALIGNMENT 0 YS2-4j16.q1k chr05 78 62 574959 574958 C 17 0.00 1509 reject_low 219 ALIGNMENT 29 YS2-4j16.p1k chr13 697 665 3754 3786 C 33 96.97 1366 reject_low 252 ALIGNMENT 0 YS2-4j16.q1k chr04 78 62 1530130 1530129 C 17 0.00 1509 reject_low 218 ALIGNMENT 167 YS2-4j16.q1k chr12 34 325 1637 1928 F 292 86.64 1509 reject_low 268 ALIGNMENT 0 YS2-4j16.q1k chr10 347 607 2223 2222 F 261 0.00 1509 reject_low 81 ALIGNMENT 77 YS2-4j16.q1k chr12 152 289 7326 7463 F 138 86.23 1509|4,0 reject_low 291 ALIGNMENT 0 YS2-4j16.q1k chr05 347 607 1988 1987 F 261 0.00 1509 reject_low 29 ALIGNMENT 125 YS2-4j16.q1k chr06 91 346 940 1195 F 256 83.98 1509 reject_low 111 ALIGNMENT 77 YS2-4j16.q1k chr13 152 289 1667 1804 F 138 86.23 1509 reject_low 162 ALIGNMENT 0 YS2-4j16.q1k chr06 347 607 1159 1158 F 261 0.00 1509 reject_low 62 ALIGNMENT 431 YS2-4j16.q1k chr12 838 83 1069123 1069879 C 756 87.30 1509 reject_low 9 ALIGNMENT 0 YS2-4j16.q1k chr12 289 607 2215 2214 F 319 0.00 1509 reject_low 277 ALIGNMENT 0 YS2-4j16.p1k chr12 364 860 1067128 1067127 F 497 0.00 1366 reject_low 36,37,38,39,40,41,42,43,44,45,46,47,48,49 ALIGNMENT 98 YS2-4j16.q1k chr10 133 340 1902 2109 F 208 83.17 1509 reject_low 136 ALIGNMENT 200 YS2-4j16.q1k chr12 83 344 1902 2163 F 262 93.13 1509 reject_low 269 ALIGNMENT 1010 YS2-4j16.p1k chr14 1205 30 3638 4824 C 1176 96.00 1366 ambiguous_tel 2 ALIGNMENT 0 YS2-4j16.q1k chr04 607 345 1530225 1530224 C 263 0.00 1509 reject_low 52 ALIGNMENT 0 YS2-4j16.q1k chr16 234 62 946340 946339 C 173 0.00 1509 reject_low 263 ALIGNMENT 0 YS2-4j16.p1k chr06 718 698 2925 2914 C 21 0.00 1366 reject_low 266 ALIGNMENT 0 YS2-4j16.q1k chr13 62 259 1667 1666 F 198 0.00 1509 reject_low 234 ALIGNMENT 437 YS2-4j16.q1k chr07 838 83 1088491 1089247 C 756 87.57 1509 ambiguous_tel 1 ALIGNMENT 0 YS2-4j16.q1k chr05 607 290 575217 575216 C 318 0.00 1509 reject_low 186 ALIGNMENT 144 YS2-4j16.q1k chr12 91 344 1874 2127 F 254 86.61 1509 reject_low 272 ALIGNMENT 0 YS2-4j16.q1k chr07 78 62 1089144 1089143 C 17 0.00 1509 reject_low 150 ALIGNMENT 34 YS2-4j16.q1k chr10 166 236 2295 2365 F 71 83.10 1509 reject_low 247 ALIGNMENT 0 YS2-4j16.q1k chr12 82 62 1076579 1076578 C 21 0.00 1509 reject_low 14 ALIGNMENT 0 YS2-4j16.q1k chr10 341 607 2073 2072 F 267 0.00 1509 reject_low 154 ALIGNMENT 77 YS2-4j16.q1k chr07 252 79 1088970 1089143 C 174 82.76 1509 reject_low 150 ALIGNMENT 0 YS2-4j16.q1k chr06 146 165 1187 1194 F 20 0.00 1509 reject_low 245 ALIGNMENT 0 YS2-4j16.q1k chr12 62 90 7553 7552 F 29 0.00 1509 reject_low 278 ALIGNMENT 0 YS2-4j16.q1k chr02 62 90 1821 1820 F 29 0.00 1509 reject_low 129 ALIGNMENT 0 YS2-4j16.q1k chr05 341 607 1838 1837 F 267 0.00 1509 reject_low 26 ALIGNMENT 29 YS2-4j16.p1k chr12 697 665 9413 9445 C 33 96.97 1366 reject_low 251,267,270,273,274,278,282,283,285,287,288,290,291,292,293 ALIGNMENT 0 YS2-4j16.q1k chr09 345 607 2202 2201 F 263 0.00 1509 reject_low 108 ALIGNMENT 0 YS2-4j16.q1k chr15 607 345 1089318 1089317 C 263 0.00 1509 reject_low 103 ALIGNMENT 0 YS2-4j16.q1k chr04 79 62 1530453 1530452 C 18 0.00 1509 reject_low 88 ALIGNMENT 0 YS2-4j16.q1k chr12 62 79 7362 7361 F 18 0.00 1509 reject_low 273 ALIGNMENT 0 YS2-4j16.q1k chr13 341 607 1963 1962 F 267 0.00 1509 reject_low 91 ALIGNMENT 155 YS2-4j16.q1k chr02 83 344 1705 1966 F 262 87.40 1509 reject_low 76 ALIGNMENT 43 YS2-4j16.q1k chr04 158 91 1530086 1530153 C 68 89.71 1509 reject_low 198 ALIGNMENT 131 YS2-4j16.q1k chr07 288 91 1088970 1089167 C 198 89.90 1509 reject_low 113 ALIGNMENT 0 YS2-4j16.q1k chr14 341 607 1870 1869 F 267 0.00 1509 reject_low 92 ALIGNMENT 142 YS2-4j16.q1k chr02 80 344 1630 1894 F 265 85.66 1509 reject_low 85 ALIGNMENT 0 YS2-4j16.q1k chr02 290 607 1695 1694 F 318 0.00 1509 reject_low 61 ALIGNMENT 0 YS2-4j16.q1k chr15 79 62 1089366 1089365 C 18 0.00 1509 reject_low 183 ALIGNMENT 47 YS2-4j16.q1k chr02 235 325 1497 1587 F 91 84.62 1509 reject_low 206 ALIGNMENT 0 YS2-4j16.q1k chr08 326 607 1752 1751 F 282 0.00 1509 reject_low 210 ALIGNMENT 0 YS2-4j16.q1k chr13 345 607 2039 2038 F 263 0.00 1509 reject_low 65 ALIGNMENT 997 YS2-4j16.p1k chr09 1205 30 4026 5213 C 1176 95.66 1366 ambiguous_tel 7 ALIGNMENT 53 YS2-4j16.q1k chr12 199 289 7337 7427 F 91 86.81 1509|9,0 reject_low 292 ALIGNMENT 0 YS2-4j16.q1k chr04 82 62 1530378 1530377 C 21 0.00 1509 reject_low 68 ALIGNMENT 23 YS2-4j16.q1k chr09 81 145 2239 2303 F 65 80.00 1509 reject_low 246 ALIGNMENT 0 YS2-4j16.q1k chr12 62 198 1694 1693 F 137 0.00 1509 reject_low 284 ALIGNMENT 0 YS2-4j16.q1k chr09 326 607 1859 1858 F 282 0.00 1509 reject_low 166 ALIGNMENT 0 YS2-4j16.q1k chr12 330 607 7395 7394 F 278 0.00 1509 reject_low 293 ALIGNMENT 0 YS2-4j16.q1k chr07 607 341 1089099 1089098 C 267 0.00 1509 reject_low 90 ALIGNMENT 77 YS2-4j16.q1k chr12 289 152 1076552 1076689 C 138 86.23 1509 reject_low 39 ALIGNMENT 1016 YS2-4j16.p1k chr04 30 1205 1527238 1528424 F 1176 95.92 1366 ambiguous_tel 0 ALIGNMENT 0 YS2-4j16.q1k chr10 62 79 2029 2028 F 18 0.00 1509 reject_low 243 ALIGNMENT 43 YS2-4j16.q1k chr15 158 91 1089251 1089318 C 68 89.71 1509 reject_low 203 ALIGNMENT 0 YS2-4j16.q1k chr13 345 607 2003 2002 F 263 0.00 1509 reject_low 98 ALIGNMENT 0 YS2-4j16.q1k chr04 115 62 1530489 1530488 C 54 0.00 1509 reject_low 141 ALIGNMENT 47 YS2-4j16.q1k chr15 325 235 1089552 1089642 C 91 84.62 1509 reject_low 214 ALIGNMENT 0 YS2-4j16.q1k chr05 345 607 1878 1877 F 263 0.00 1509 reject_low 27 ALIGNMENT 0 YS2-4j16.q1k chr05 198 62 575307 575306 C 137 0.00 1509 reject_low 186 ALIGNMENT 0 YS2-4j16.q1k chr02 326 607 2019 2018 F 282 0.00 1509 reject_low 121 ALIGNMENT 0 YS2-4j16.q1k chr02 62 79 1738 1737 F 18 0.00 1509 reject_low 72 ALIGNMENT 0 YS2-4j16.q1k chr16 90 62 946304 946303 C 29 0.00 1509 reject_low 249 ALIGNMENT 145 YS2-4j16.q1k chr02 79 340 1845 2106 F 262 86.26 1509 reject_low 82 ALIGNMENT 43 YS2-4j16.q1k chr12 91 158 7661 7728 F 68 89.71 1509 reject_low 287 ALIGNMENT 131 YS2-4j16.q1k chr05 288 91 574893 575090 C 198 89.90 1509 reject_low 112 ALIGNMENT 122 YS2-4j16.q1k chr02 83 344 1597 1858 F 262 83.21 1509 reject_low 120 ALIGNMENT 24 YS2-4j16.p1k chr08 615 644 558694 558723 F 30 93.33 1366 reject_low 264 ALIGNMENT 40 YS2-4j16.q1k chr05 260 325 1470 1535 F 66 87.88 1509 reject_low 51 ALIGNMENT 0 YS2-4j16.q1k chr05 62 198 1481 1480 F 137 0.00 1509 reject_low 32 ALIGNMENT 94 YS2-4j16.q1k chr09 80 344 2082 2346 F 265 79.62 1509 reject_low 134 ALIGNMENT 50 YS2-4j16.q1k chr07 216 80 1088970 1089106 C 137 80.29 1509 reject_low 174 ALIGNMENT 0 YS2-4j16.q1k chr02 62 90 2073 2072 F 29 0.00 1509 reject_low 107 ALIGNMENT 128 YS2-4j16.q1k chr15 288 91 1089229 1089426 C 198 89.39 1509 reject_low 119 ALIGNMENT 0 YS2-4j16.q1k chr04 78 62 1530238 1530237 C 17 0.00 1509 reject_low 156 ALIGNMENT 43 YS2-4j16.q1k chr12 158 91 1076287 1076354 C 68 89.71 1509|3,0 reject_low 47 ALIGNMENT 0 YS2-4j16.q1k chr08 62 259 1651 1650 F 198 0.00 1509 reject_low 195 ALIGNMENT 0 YS2-4j16.q1k chr12 62 234 1694 1693 F 173 0.00 1509 reject_low 286 ALIGNMENT 0 YS2-4j16.q1k chr12 607 290 1076589 1076588 C 318 0.00 1509 reject_low 41 ALIGNMENT 83 YS2-4j16.q1k chr16 289 199 946249 946339 C 91 97.80 1509 reject_low 258 ALIGNMENT 144 YS2-4j16.q1k chr02 80 340 1990 2250 F 261 86.21 1509 reject_low 84 ALIGNMENT 147 YS2-4j16.q1k chr16 344 91 946050 946303 C 254 87.01 1509 reject_low 249 ALIGNMENT 50 YS2-4j16.q1k chr05 216 80 574893 575029 C 137 80.29 1509 reject_low 173 ALIGNMENT 33 YS2-4j16.q1k chr12 79 144 2150 2215 F 66 84.85 1509 reject_low 293 ALIGNMENT 0 YS2-4j16.q1k chr13 62 151 1667 1666 F 90 0.00 1509 reject_low 162 ALIGNMENT 33 YS2-4j16.q1k chr05 144 79 574893 574958 C 66 84.85 1509 reject_low 219 ALIGNMENT 88 YS2-4j16.q1k chr02 152 334 1486 1668 F 183 83.61 1509 reject_low 138 ALIGNMENT 0 YS2-4j16.q1k chr12 289 607 7750 7749 F 319 0.00 1509 reject_low 278 ALIGNMENT 0 YS2-4j16.q1k chr07 607 145 1088971 1088970 C 463 0.00 1509 reject_low 220 ALIGNMENT 118 YS2-4j16.q1k chr09 80 344 1758 2022 F 265 82.64 1509 reject_low 122 ALIGNMENT 0 YS2-4j16.q1k chr12 62 79 1791 1790 F 18 0.00 1509 reject_low 275 ALIGNMENT 0 YS2-4j16.q1k chr04 607 345 1530153 1530152 C 263 0.00 1509 reject_low 102 ALIGNMENT 0 YS2-4j16.q1k chr16 607 341 946271 946270 C 267 0.00 1509 reject_low 259 ALIGNMENT 50 YS2-4j16.p1k chr08 771 719 3567 3619 C 53 98.11 1366 reject_low 241 ALIGNMENT 74 YS2-4j16.q1k chr12 252 79 1076265 1076438 C 174 82.18 1509|9,0 reject_low 46 ALIGNMENT 0 YS2-4j16.q1k chr12 330 607 1896 1895 F 278 0.00 1509 reject_low 280 ALIGNMENT 0 YS2-4j16.q1k chr12 607 253 1069603 1069602 C 355 0.00 1509 reject_low 38 ALIGNMENT 195 YS2-4j16.q1k chr16 34 344 1437 1747 F 311 88.42 1509 reject_low 58 ALIGNMENT 0 YS2-4j16.q1k chr06 62 294 892 891 F 233 0.00 1509 reject_low 217 ALIGNMENT 77 YS2-4j16.q1k chr16 252 79 945962 946135 C 174 82.76 1509 reject_low 257 ALIGNMENT 20 YS2-4j16.q1k chr10 274 348 2235 2309 F 75 76.00 1509 reject_low 243 ALIGNMENT 0 YS2-4j16.q1k chr05 62 79 1578 1577 F 18 0.00 1509 reject_low 26 ALIGNMENT 0 YS2-4j16.q1k chr08 79 62 560806 560805 C 18 0.00 1509 reject_low 128 ALIGNMENT 50 YS2-4j16.q1k chr12 80 216 7614 7750 F 137 80.29 1509 reject_low 285 ALIGNMENT 0 YS2-4j16.q1k chr05 79 62 575030 575029 C 18 0.00 1509 reject_low 173 ALIGNMENT 0 YS2-4j16.q1k chr02 253 607 2414 2413 F 355 0.00 1509 reject_low 139 ALIGNMENT 136 YS2-4j16.q1k chr12 80 344 7398 7662 F 265 84.91 1509 reject_low 274 ALIGNMENT 0 YS2-4j16.q1k chr15 607 253 1089230 1089229 C 355 0.00 1509 reject_low 157 ALIGNMENT 104 YS2-4j16.q1k chr02 116 325 1486 1695 F 210 84.29 1509 reject_low 130 ALIGNMENT 0 YS2-4j16.q1k chr12 345 607 7662 7661 F 263 0.00 1509 reject_low 274 ALIGNMENT 44 YS2-4j16.q1k chr08 216 80 560417 560553 C 137 78.83 1509 reject_low 197 ALIGNMENT 33 YS2-4j16.q1k chr07 144 79 1088970 1089035 C 66 84.85 1509 reject_low 220 ALIGNMENT 47 YS2-4j16.q1k chr12 325 235 1076588 1076678 C 91 84.62 1509 reject_low 43 ALIGNMENT 0 YS2-4j16.q1k chr12 62 82 1938 1937 F 21 0.00 1509 reject_low 250 ALIGNMENT 0 YS2-4j16.q1k chr10 267 273 2216 2234 F 7 0.00 1509 reject_low 243 ALIGNMENT 0 YS2-4j16.q1k chr07 78 62 1089036 1089035 C 17 0.00 1509 reject_low 220 ALIGNMENT 0 YS2-4j16.q1k chr05 82 62 575207 575206 C 21 0.00 1509 reject_low 63 ALIGNMENT 47 YS2-4j16.q1k chr12 235 340 1694 1799 F 106 82.08 1509 reject_low 286 ALIGNMENT 0 YS2-4j16.q1k chr10 326 607 2022 2021 F 282 0.00 1509 reject_low 132 ALIGNMENT 0 YS2-4j16.q1k chr05 309 607 2058 2057 F 299 0.00 1509 reject_low 33 ALIGNMENT 0 YS2-4j16.q1k chr09 345 607 2022 2021 F 263 0.00 1509 reject_low 122 ALIGNMENT 0 YS2-4j16.p1k chr08 62 495 558621 558620 F 434 0.00 1366 reject_low 264 ALIGNMENT 0 YS2-4j16.q1k chr12 62 259 1683 1682 F 198 0.00 1509 reject_low 289 ALIGNMENT 0 YS2-4j16.q1k chr12 145 607 7750 7749 F 463 0.00 1509 reject_low 288 ALIGNMENT 47 YS2-4j16.q1k chr12 216 80 1069602 1069738 C 137 79.56 1509 reject_low 40 ALIGNMENT 105 YS2-4j16.q1k chr02 91 344 1821 2074 F 254 81.50 1509 reject_low 129 ALIGNMENT 0 YS2-4j16.q1k chr16 79 62 946279 946278 C 18 0.00 1509 reject_low 244 ALIGNMENT 0 YS2-4j16.q1k chr13 217 607 2091 2090 F 391 0.00 1509 reject_low 175 ALIGNMENT 0 YS2-4j16.q1k chr12 62 90 1874 1873 F 29 0.00 1509 reject_low 272 ALIGNMENT 67 YS2-4j16.q1k chr12 199 325 1694 1820 F 127 85.04 1509 reject_low 284 ALIGNMENT 405 YS2-4j16.q1k chr08 837 83 559938 560694 C 755 86.23 1509 reject_low 264 ALIGNMENT 0 YS2-4j16.q1k chr10 62 132 1902 1901 F 71 0.00 1509 reject_low 136 ALIGNMENT 128 YS2-4j16.q1k chr12 288 91 1076265 1076462 C 198 89.39 1509 reject_low 20 ALIGNMENT 0 YS2-4j16.q1k chr07 607 345 1089059 1089058 C 263 0.00 1509 reject_low 97 ALIGNMENT 24 YS2-4j16.p1k chr13 644 615 3783 3812 C 30 93.33 1366 reject_low 252 ALIGNMENT 156 YS2-4j16.q1k chr05 80 346 1686 1952 F 267 87.27 1509 reject_low 23 ALIGNMENT 0 YS2-4j16.q1k chr04 607 345 1530261 1530260 C 263 0.00 1509 reject_low 141 ALIGNMENT 0 YS2-4j16.q1k chr05 345 607 1914 1913 F 263 0.00 1509 reject_low 22 ALIGNMENT 43 YS2-4j16.q1k chr07 158 91 1088992 1089059 C 68 89.71 1509 reject_low 200 ALIGNMENT 47 YS2-4j16.q1k chr15 216 80 1089229 1089365 C 137 79.56 1509 reject_low 183 ALIGNMENT 24 YS2-4j16.p1k chr06 644 615 2944 2973 C 30 93.33 1366 reject_low 266 ALIGNMENT 0 YS2-4j16.q1k chr06 347 607 1123 1122 F 261 0.00 1509 reject_low 127 ALIGNMENT 0 YS2-4j16.q1k chr13 62 78 2026 2025 F 17 0.00 1509 reject_low 221 ALIGNMENT 0 YS2-4j16.q1k chr16 113 62 946353 946352 C 52 0.00 1509 reject_low 255 ALIGNMENT 0 YS2-4j16.q1k chr16 62 79 1555 1554 F 18 0.00 1509 reject_low 100 ALIGNMENT 0 YS2-4j16.p1k chr05 328 271 4590 4587 C 58 0.00 1366 reject_low 10,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,50,51 ALIGNMENT 33 YS2-4j16.q1k chr16 79 144 1842 1907 F 66 84.85 1509 reject_low 224 ALIGNMENT 0 YS2-4j16.q1k chr14 62 78 1825 1824 F 17 0.00 1509 reject_low 152 ALIGNMENT 0 YS2-4j16.q1k chr02 159 607 2392 2391 F 449 0.00 1509 reject_low 226 ALIGNMENT 0 YS2-4j16.q1k chr15 607 345 1089390 1089389 C 263 0.00 1509 reject_low 57 ALIGNMENT 0 YS2-4j16.q1k chr08 62 90 1842 1841 F 29 0.00 1509 reject_low 216 ALIGNMENT 129 YS2-4j16.q1k chr02 79 344 1953 2218 F 266 83.83 1509 reject_low 105 ALIGNMENT 0 YS2-4j16.q1k chr04 607 290 1530388 1530387 C 318 0.00 1509 reject_low 185 ALIGNMENT 0 YS2-4j16.q1k chr07 607 345 1089131 1089130 C 263 0.00 1509 reject_low 54 ALIGNMENT 0 YS2-4j16.q1k chr02 62 78 1845 1844 F 17 0.00 1509 reject_low 82 ALIGNMENT 0 YS2-4j16.q1k chr09 62 79 1866 1865 F 18 0.00 1509 reject_low 110 ALIGNMENT 202 YS2-4j16.q1k chr16 344 80 946014 946278 C 265 93.21 1509 reject_low 244 ALIGNMENT 0 YS2-4j16.q1k chr16 345 607 1855 1854 F 263 0.00 1509 reject_low 67 ALIGNMENT 0 YS2-4j16.q1k chr12 145 259 2216 7325 F 115 0.00 1509 reject_low 293 ALIGNMENT 0 YS2-4j16.q1k chr04 259 62 1530489 1530488 C 198 0.00 1509 reject_low 230 ALIGNMENT 0 YS2-4j16.q1k chr06 62 151 893 892 F 90 0.00 1509 reject_low 77 ALIGNMENT 0 YS2-4j16.q1k chr08 259 62 560842 560841 C 198 0.00 1509 reject_low 233 ALIGNMENT 0 YS2-4j16.q1k chr06 341 607 1009 1008 F 267 0.00 1509 reject_low 169 ALIGNMENT 0 YS2-4j16.q1k chr13 290 607 1804 1803 F 318 0.00 1509 reject_low 162 ALIGNMENT 53 YS2-4j16.p1k chr08 496 552 558621 558677 F 57 98.25 1366 reject_low 264 ALIGNMENT 50 YS2-4j16.p1k chr12 771 719 9370 9422 C 53 98.11 1366 reject_low 251,267,270,273,274,278,282,283,285,287,288,290,291,292,293 ALIGNMENT 77 YS2-4j16.q1k chr04 289 152 1530351 1530488 C 138 86.23 1509 reject_low 158 ALIGNMENT 146 YS2-4j16.q1k chr08 288 91 560417 560614 C 198 92.42 1509 reject_low 87 ALIGNMENT 61 YS2-4j16.q1k chr09 199 340 1697 1838 F 142 81.69 1509 reject_low 170 ALIGNMENT 0 YS2-4j16.q1k chr09 345 607 2346 2345 F 263 0.00 1509 reject_low 134 ALIGNMENT 0 YS2-4j16.q1k chr12 607 326 1069926 1069925 C 282 0.00 1509 reject_low 46 ALIGNMENT 0 YS2-4j16.q1k chr02 345 607 2074 2073 F 263 0.00 1509 reject_low 129 ALIGNMENT 136 YS2-4j16.q1k chr14 80 344 1646 1910 F 265 84.91 1509 reject_low 99 ALIGNMENT 53 YS2-4j16.p1k chr12 552 496 3953 4009 C 57 98.25 1366 reject_low 250,268,269,271,272,275,276,277,279,280,281,284,286,289 ALIGNMENT 0 YS2-4j16.q1k chr14 62 78 1933 1932 F 17 0.00 1509 reject_low 222 ALIGNMENT 29 YS2-4j16.p1k chr08 665 697 558720 558752 F 33 96.97 1366 reject_low 264 ALIGNMENT 0 YS2-4j16.q1k chr02 341 607 2178 2177 F 267 0.00 1509 reject_low 83 ALIGNMENT 0 YS2-4j16.q1k chr12 607 289 1069603 1069602 C 319 0.00 1509 reject_low 19 ALIGNMENT 33 YS2-4j16.q1k chr12 144 79 1076265 1076330 C 66 84.85 1509 reject_low 49 ALIGNMENT 47 YS2-4j16.q1k chr04 325 235 1530387 1530477 C 91 84.62 1509 reject_low 207 ALIGNMENT 133 YS2-4j16.q1k chr12 344 80 1076353 1076617 C 265 84.53 1509 reject_low 18 ALIGNMENT 0 YS2-4j16.p1k chr02 495 62 4211 4210 C 434 0.00 1366 reject_low 265 ALIGNMENT 0 YS2-4j16.q1k chr02 341 607 2106 2105 F 267 0.00 1509 reject_low 82 ALIGNMENT 50 YS2-4j16.p1k chr16 719 771 944290 944342 F 53 98.11 1366 reject_low 240,244,249,253,254,255,256,257,258,259,260,261,262,263 ALIGNMENT 0 YS2-4j16.q1k chr12 79 62 1076654 1076653 C 18 0.00 1509 reject_low 16 ALIGNMENT 1010 YS2-4j16.p1k chr16 1205 30 3547 4733 C 1176 96.00 1366 ambiguous_tel 5 ALIGNMENT 148 YS2-4j16.q1k chr09 75 344 1897 2166 F 270 85.93 1509 reject_low 71 ALIGNMENT 0 YS2-4j16.q1k chr05 151 62 575318 575317 C 90 0.00 1509 reject_low 159 ALIGNMENT 50 YS2-4j16.q1k chr06 79 268 1072 1261 F 190 76.84 1509 reject_low 178 ALIGNMENT 0 YS2-4j16.q1k chr14 289 607 1998 1997 F 319 0.00 1509 reject_low 115 ALIGNMENT 0 YS2-4j16.q1k chr02 347 607 1932 1931 F 261 0.00 1509 reject_low 75 ALIGNMENT 0 YS2-4j16.q1k chr09 282 281 1708 2259 F 0 0.00 1509 reject_low 248 ALIGNMENT 194 YS2-4j16.q1k chr05 34 325 1424 1715 F 292 89.73 1509 reject_low 21 ALIGNMENT 0 YS2-4j16.q1k chr12 290 607 7463 7462 F 318 0.00 1509 reject_low 291 ALIGNMENT 0 YS2-4j16.q1k chr16 149 62 946353 946352 C 88 0.00 1509 reject_low 256 ALIGNMENT 0 YS2-4j16.q1k chr02 341 607 2250 2249 F 267 0.00 1509 reject_low 84 ALIGNMENT 31 YS2-4j16.q1k chr02 91 144 2361 2414 F 54 87.04 1509 reject_low 238 ALIGNMENT 0 YS2-4j16.q1k chr04 607 290 1530352 1530351 C 318 0.00 1509 reject_low 158 ALIGNMENT 136 YS2-4j16.q1k chr02 80 344 1558 1822 F 265 84.91 1509 reject_low 95 ALIGNMENT 465 YS2-4j16.q1k chr08 34 824 1605 2413 F 791 87.86 1509 reject_low 241 ALIGNMENT 0 YS2-4j16.q1k chr16 607 145 945963 945962 C 463 0.00 1509 reject_low 262 ALIGNMENT 119 YS2-4j16.q1k chr08 80 266 1723 1909 F 187 89.30 1509 reject_low 123 ALIGNMENT 0 YS2-4j16.q1k chr08 62 234 1662 1661 F 173 0.00 1509 reject_low 210 ALIGNMENT 0 YS2-4j16.q1k chr10 62 90 1932 1931 F 29 0.00 1509 reject_low 109 ALIGNMENT 0 YS2-4j16.q1k chr05 62 79 1722 1721 F 18 0.00 1509 reject_low 29 ALIGNMENT 0 YS2-4j16.q1k chr12 290 607 7427 7426 F 318 0.00 1509 reject_low 292 ALIGNMENT 0 YS2-4j16.q1k chr09 62 79 1974 1973 F 18 0.00 1509 reject_low 80 ALIGNMENT 0 YS2-4j16.q1k chr05 345 607 2022 2021 F 263 0.00 1509 reject_low 25 ALIGNMENT 0 YS2-4j16.q1k chr12 82 62 1076543 1076542 C 21 0.00 1509 ambiguous_tel 3 ALIGNMENT 0 YS2-4j16.q1k chr09 62 79 2118 2117 F 18 0.00 1509 ambiguous_tel 7 ALIGNMENT 0 YS2-4j16.q1k chr14 62 79 1646 1645 F 18 0.00 1509 reject_low 99 ALIGNMENT 0 YS2-4j16.q1k chr16 62 151 1483 1482 F 90 0.00 1509 reject_low 165 ALIGNMENT 0 YS2-4j16.q1k chr10 345 607 2329 2328 F 263 0.00 1509 reject_low 135 ALIGNMENT 0 YS2-4j16.p1k chr06 664 645 2948 2943 C 20 0.00 1366 reject_low 266 ALIGNMENT 0 YS2-4j16.q1k chr16 198 62 946340 946339 C 137 0.00 1509 reject_low 258 ALIGNMENT 0 YS2-4j16.q1k chr10 62 79 2101 2100 F 18 0.00 1509 ambiguous_tel 6 ALIGNMENT 0 YS2-4j16.q1k chr05 237 607 2058 2057 F 371 0.00 1509 reject_low 35 ALIGNMENT 131 YS2-4j16.q1k chr12 91 288 7553 7750 F 198 89.90 1509 reject_low 278 ALIGNMENT 195 YS2-4j16.q1k chr14 34 344 1528 1838 F 311 88.42 1509 reject_low 56 ALIGNMENT 0 YS2-4j16.q1k chr05 269 607 2054 2053 F 339 0.00 1509 reject_low 34 ALIGNMENT 129 YS2-4j16.q1k chr12 80 289 1719 1928 F 210 88.57 1509 reject_low 276 ALIGNMENT 0 YS2-4j16.q1k chr06 309 607 1265 1264 F 299 0.00 1509 reject_low 181 ALIGNMENT 0 YS2-4j16.q1k chr10 62 79 2065 2064 F 18 0.00 1509 reject_low 135 ALIGNMENT 0 YS2-4j16.q1k chr05 62 79 1758 1757 F 18 0.00 1509 reject_low 25 ALIGNMENT 84 YS2-4j16.q1k chr13 116 344 1667 1895 F 229 79.91 1509 reject_low 145 ALIGNMENT 0 YS2-4j16.q1k chr12 326 607 1748 1747 F 282 0.00 1509 reject_low 289 ALIGNMENT 195 YS2-4j16.q1k chr12 34 344 7280 7590 F 311 88.42 1509 reject_low 267 ALIGNMENT 0 YS2-4j16.q1k chr12 62 90 7661 7660 F 29 0.00 1509 reject_low 287 ALIGNMENT 0 YS2-4j16.q1k chr16 607 345 946123 946122 C 263 0.00 1509 reject_low 255 ALIGNMENT 0 YS2-4j16.q1k chr14 62 151 1574 1573 F 90 0.00 1509 reject_low 163 ALIGNMENT 0 YS2-4j16.q1k chr05 607 345 575090 575089 C 263 0.00 1509 reject_low 142 ALIGNMENT 133 YS2-4j16.q1k chr04 344 80 1530152 1530416 C 265 84.53 1509 reject_low 102 ALIGNMENT 0 YS2-4j16.q1k chr02 62 259 1486 1485 F 198 0.00 1509 reject_low 229 ALIGNMENT 0 YS2-4j16.q1k chr12 79 62 1069739 1069738 C 18 0.00 1509 reject_low 40 ALIGNMENT 0 YS2-4j16.q1k chr09 267 273 2233 2251 F 7 0.00 1509 reject_low 242 ALIGNMENT 69 YS2-4j16.q1k chr08 80 258 1759 1937 F 179 81.01 1509 reject_low 168 ALIGNMENT 0 YS2-4j16.q1k chr05 607 289 574894 574893 C 319 0.00 1509 reject_low 112 ALIGNMENT 52 YS2-4j16.q1k chr06 91 308 1048 1265 F 218 75.69 1509 reject_low 181 ALIGNMENT 138 YS2-4j16.q1k chr15 340 80 1089357 1089617 C 261 85.44 1509 reject_low 93 ALIGNMENT 0 YS2-4j16.q1k chr05 330 607 1755 1754 F 278 0.00 1509 reject_low 28 ALIGNMENT 0 YS2-4j16.q1k chr07 259 62 1089395 1089394 C 198 0.00 1509 reject_low 232 ALIGNMENT 0 YS2-4j16.p1k chr08 860 772 3568 3567 C 89 0.00 1366 reject_low 241 ALIGNMENT 615 YS2-4j16.p1k chr05 1205 379 3702 4558 C 827 92.38 1366 reject_low 10,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35 ALIGNMENT 43 YS2-4j16.q1k chr16 158 91 945984 946051 C 68 89.71 1509 reject_low 261 ALIGNMENT 0 YS2-4j16.q1k chr02 62 79 2098 2097 F 18 0.00 1509 reject_low 73 ALIGNMENT 0 YS2-4j16.q1k chr13 330 607 1736 1735 F 278 0.00 1509 reject_low 234 ALIGNMENT 0 YS2-4j16.q1k chr09 62 79 2082 2081 F 18 0.00 1509 reject_low 134 ALIGNMENT 0 YS2-4j16.q1k chr02 345 607 1858 1857 F 263 0.00 1509 reject_low 120 ALIGNMENT 166 YS2-4j16.q1k chr02 80 344 2098 2362 F 265 88.68 1509 reject_low 73 ALIGNMENT 0 YS2-4j16.q1k chr05 115 62 575318 575317 C 54 0.00 1509 reject_low 142 ALIGNMENT 0 YS2-4j16.p1k chr06 495 62 3047 3046 C 434 0.00 1366 reject_low 266 ALIGNMENT 0 YS2-4j16.q1k chr12 115 62 1076690 1076689 C 54 0.00 1509 reject_low 37 ALIGNMENT 0 YS2-4j16.q1k chr05 326 607 1643 1642 F 282 0.00 1509 reject_low 31 ALIGNMENT 0 YS2-4j16.q1k chr04 151 62 1530489 1530488 C 90 0.00 1509 reject_low 158 ALIGNMENT 0 YS2-4j16.q1k chr08 345 607 1879 1878 F 263 0.00 1509 reject_low 133 ALIGNMENT 53 YS2-4j16.p1k chr13 552 496 3829 3885 C 57 98.25 1366 reject_low 252 ALIGNMENT 165 YS2-4j16.q1k chr02 80 346 1738 2004 F 267 88.39 1509 reject_low 72 ALIGNMENT 0 YS2-4j16.p1k chr16 553 614 944225 944240 F 62 0.00 1366 reject_low 240,244,249,253,254,255,256,257,258,259,260,261,262,263 ALIGNMENT 0 YS2-4j16.q1k chr13 62 90 2002 2001 F 29 0.00 1509 reject_low 201 ALIGNMENT 0 YS2-4j16.q1k chr05 62 79 1542 1541 F 18 0.00 1509 reject_low 24 ALIGNMENT 155 YS2-4j16.q1k chr02 91 346 1677 1932 F 256 87.89 1509 reject_low 75 ALIGNMENT 183 YS2-4j16.q1k chr09 80 325 1794 2039 F 246 92.68 1509 reject_low 70 ALIGNMENT 0 YS2-4j16.q1k chr12 345 607 2163 2162 F 263 0.00 1509 reject_low 269 ALIGNMENT 0 YS2-4j16.q1k chr10 309 607 2365 2364 F 299 0.00 1509 reject_low 194 ALIGNMENT 120 YS2-4j16.q1k chr12 80 340 1827 2087 F 261 83.14 1509 reject_low 279 ALIGNMENT 0 YS2-4j16.q1k chr02 145 607 2414 2413 F 463 0.00 1509 reject_low 238 ALIGNMENT 63 YS2-4j16.q1k chr05 91 268 1877 2054 F 178 79.78 1509 reject_low 34 ALIGNMENT 0 YS2-4j16.p1k chr12 860 772 3836 3835 C 89 0.00 1366 reject_low 250,268,269,271,272,275,276,277,279,280,281,284,286,289 ALIGNMENT 0 YS2-4j16.q1k chr12 345 607 2019 2018 F 263 0.00 1509 reject_low 271 ALIGNMENT 0 YS2-4j16.q1k chr05 607 330 575249 575248 C 278 0.00 1509 reject_low 231 ALIGNMENT 39 YS2-4j16.q1k chr07 329 260 1089325 1089394 C 70 85.71 1509 reject_low 232 ALIGNMENT 47 YS2-4j16.q1k chr08 235 325 1662 1752 F 91 84.62 1509 reject_low 210 ALIGNMENT 77 YS2-4j16.q1k chr05 252 79 574893 575066 C 174 82.76 1509 reject_low 149 ALIGNMENT 412 YS2-4j16.q1k chr10 80 840 2101 2850 F 761 86.20 1509 ambiguous_tel 6 ALIGNMENT 0 YS2-4j16.q1k chr15 82 62 1089543 1089542 C 21 0.00 1509 reject_low 69 ALIGNMENT 129 YS2-4j16.q1k chr09 80 340 1866 2126 F 261 84.29 1509 reject_low 110 ALIGNMENT 0 YS2-4j16.q1k chr12 90 62 1069692 1069691 C 29 0.00 1509 reject_low 42 ALIGNMENT 43 YS2-4j16.q1k chr10 277 340 1902 1965 F 64 89.06 1509 reject_low 205 ALIGNMENT 0 YS2-4j16.q1k chr16 607 345 946015 946014 C 263 0.00 1509 reject_low 244 ALIGNMENT 0 YS2-4j16.q1k chr12 607 341 1076394 1076393 C 267 0.00 1509 reject_low 16 ALIGNMENT 39 YS2-4j16.q1k chr14 260 329 1574 1643 F 70 85.71 1509 reject_low 235 ALIGNMENT 434 YS2-4j16.q1k chr12 83 838 1938 2694 F 756 87.43 1509 reject_low 250 ALIGNMENT 0 YS2-4j16.q1k chr07 79 62 1089359 1089358 C 18 0.00 1509 reject_low 90 ALIGNMENT 0 YS2-4j16.q1k chr16 330 607 1552 1551 F 278 0.00 1509 reject_low 237 ALIGNMENT 0 YS2-4j16.q1k chr12 90 62 1076355 1076354 C 29 0.00 1509 reject_low 47 ALIGNMENT 0 YS2-4j16.q1k chr09 349 607 2326 2325 F 259 0.00 1509 reject_low 242,248 ALIGNMENT 142 YS2-4j16.q1k chr05 80 344 1758 2022 F 265 85.66 1509 reject_low 25 ALIGNMENT 53 YS2-4j16.q1k chr14 199 289 1585 1675 F 91 86.81 1509 reject_low 190 ALIGNMENT 0 YS2-4j16.q1k chr08 62 79 1759 1758 F 18 0.00 1509 reject_low 168 ALIGNMENT 0 YS2-4j16.q1k chr05 607 341 575022 575021 C 267 0.00 1509 reject_low 89 ALIGNMENT 24 YS2-4j16.p1k chr16 615 644 944241 944270 F 30 93.33 1366 reject_low 240,244,249,253,254,255,256,257,258,259,260,261,262,263 ALIGNMENT 144 YS2-4j16.q1k chr10 80 346 1957 2223 F 267 85.77 1509 reject_low 81 ALIGNMENT 0 YS2-4j16.q1k chr04 79 62 1530417 1530416 C 18 0.00 1509 reject_low 102 ALIGNMENT 0 YS2-4j16.q1k chr02 62 90 2145 2144 F 29 0.00 1509 reject_low 265 ALIGNMENT 0 YS2-4j16.q1k chr09 309 607 2382 2381 F 299 0.00 1509 reject_low 193 ALIGNMENT 0 YS2-4j16.p1k chr08 718 698 3620 3609 C 21 0.00 1366 reject_low 241 ALIGNMENT 50 YS2-4j16.p1k chr08 719 771 558743 558795 F 53 98.11 1366 reject_low 264 ALIGNMENT 0 YS2-4j16.q1k chr04 90 62 1530154 1530153 C 29 0.00 1509 reject_low 198 ALIGNMENT 0 YS2-4j16.p1k chr13 664 645 3787 3782 C 20 0.00 1366 reject_low 252 ALIGNMENT 0 YS2-4j16.q1k chr16 607 290 946250 946249 C 318 0.00 1509 reject_low 258 ALIGNMENT 0 YS2-4j16.q1k chr02 330 607 1555 1554 F 278 0.00 1509 reject_low 229 ALIGNMENT 39 YS2-4j16.q1k chr16 260 329 1483 1552 F 70 85.71 1509 reject_low 237 ALIGNMENT 0 YS2-4j16.q1k chr04 607 159 1530087 1530086 C 449 0.00 1509 reject_low 198 ALIGNMENT 0 YS2-4j16.q1k chr07 90 62 1089060 1089059 C 29 0.00 1509 reject_low 200 ALIGNMENT 0 YS2-4j16.q1k chr06 62 90 940 939 F 29 0.00 1509 reject_low 111 ALIGNMENT 0 YS2-4j16.q1k chr05 234 62 575307 575306 C 173 0.00 1509 reject_low 208 ALIGNMENT 0 YS2-4j16.q1k chr12 607 345 1076318 1076317 C 263 0.00 1509 reject_low 14 ALIGNMENT 105 YS2-4j16.q1k chr05 80 346 1722 1988 F 267 80.90 1509 reject_low 29 ALIGNMENT 0 YS2-4j16.q1k chr06 345 607 1049 1048 F 263 0.00 1509 reject_low 155 ALIGNMENT 0 YS2-4j16.q1k chr12 159 607 7728 7727 F 449 0.00 1509 reject_low 287 ALIGNMENT 0 YS2-4j16.q1k chr14 62 198 1585 1584 F 137 0.00 1509 reject_low 190 ALIGNMENT 195 YS2-4j16.q1k chr12 344 34 1076425 1076735 C 311 88.42 1509 reject_low 12 ALIGNMENT 0 YS2-4j16.q1k chr12 345 607 7698 7697 F 263 0.00 1509 reject_low 270 ALIGNMENT 0 YS2-4j16.q1k chr05 326 607 1607 1606 F 282 0.00 1509 reject_low 32 ALIGNMENT 0 YS2-4j16.q1k chr16 607 253 945963 945962 C 355 0.00 1509 reject_low 257 ALIGNMENT 0 YS2-4j16.q1k chr07 151 62 1089395 1089394 C 90 0.00 1509 reject_low 160 ALIGNMENT 0 YS2-4j16.q1k chr05 62 79 1614 1613 F 18 0.00 1509 reject_low 27 ALIGNMENT 132 YS2-4j16.q1k chr02 91 344 2073 2326 F 254 85.04 1509 reject_low 107 ALIGNMENT 86 YS2-4j16.q1k chr12 152 344 1683 1875 F 193 82.38 1509 reject_low 281 ALIGNMENT 0 YS2-4j16.q1k chr15 607 145 1089230 1089229 C 463 0.00 1509 reject_low 223 ALIGNMENT 0 YS2-4j16.q1k chr04 607 253 1530065 1530064 C 355 0.00 1509 reject_low 156 ALIGNMENT 0 YS2-4j16.q1k chr02 345 607 1822 1821 F 263 0.00 1509 reject_low 95 ALIGNMENT 47 YS2-4j16.q1k chr12 216 80 1076265 1076401 C 137 79.56 1509|9,0 reject_low 48 ALIGNMENT 84 YS2-4j16.q1k chr15 344 116 1089425 1089653 C 229 79.91 1509 reject_low 147 ALIGNMENT 0 YS2-4j16.q1k chr13 326 607 1768 1767 F 282 0.00 1509 reject_low 212 ALIGNMENT 0 YS2-4j16.q1k chr12 607 330 1076621 1076620 C 278 0.00 1509 reject_low 45 ALIGNMENT 0 YS2-4j16.q1k chr07 607 253 1088971 1088970 C 355 0.00 1509 reject_low 150 ALIGNMENT 0 YS2-4j16.q1k chr05 326 607 1571 1570 F 282 0.00 1509 reject_low 50 ALIGNMENT 0 YS2-4j16.q1k chr16 145 607 1907 1906 F 463 0.00 1509 reject_low 224 ALIGNMENT 0 YS2-4j16.q1k chr08 151 62 560842 560841 C 90 0.00 1509 reject_low 161 ALIGNMENT 47 YS2-4j16.q1k chr13 235 325 1678 1768 F 91 84.62 1509 reject_low 212 ALIGNMENT 0 YS2-4j16.q1k chr12 607 341 1069731 1069730 C 267 0.00 1509 reject_low 15 ALIGNMENT 138 YS2-4j16.q1k chr12 80 340 7362 7622 F 261 85.44 1509 reject_low 273 ALIGNMENT 227 YS2-4j16.p1k chr05 270 30 4588 4828 C 241 98.34 1366 reject_low 10,21,22,23,24,25,26,27,28,29,30,31,32,33,34,35,50,51 ALIGNMENT 84 YS2-4j16.q1k chr16 116 344 1483 1711 F 229 79.91 1509 reject_low 148 ALIGNMENT 0 YS2-4j16.q1k chr05 79 62 575282 575281 C 18 0.00 1509 reject_low 89 ALIGNMENT 0 YS2-4j16.q1k chr09 62 198 1697 1696 F 137 0.00 1509 reject_low 170 ALIGNMENT 50 YS2-4j16.q1k chr10 79 268 2172 2361 F 190 76.84 1509 reject_low 180 ALIGNMENT 0 YS2-4j16.q1k chr07 82 62 1089248 1089247 C 21 0.00 1509 ambiguous_tel 1 ALIGNMENT 0 YS2-4j16.q1k chr16 257 62 946353 946352 C 196 0.00 1509 reject_low 259 ALIGNMENT 0 YS2-4j16.q1k chr16 345 607 1711 1710 F 263 0.00 1509 reject_low 148 ALIGNMENT 0 YS2-4j16.q1k chr12 82 62 1069916 1069915 C 21 0.00 1509 reject_low 13 ALIGNMENT 70 YS2-4j16.q1k chr05 152 325 1470 1643 F 174 81.03 1509 reject_low 31 ALIGNMENT 133 YS2-4j16.q1k chr15 344 80 1089317 1089581 C 265 84.53 1509 reject_low 103 ALIGNMENT 0 YS2-4j16.q1k chr05 90 62 574983 574982 C 29 0.00 1509 reject_low 199 ALIGNMENT 0 YS2-4j16.q1k chr08 267 607 1909 1908 F 341 0.00 1509 reject_low 123 ALIGNMENT 132 YS2-4j16.q1k chr09 80 340 1722 1982 F 261 84.67 1509 reject_low 106 ALIGNMENT 39 YS2-4j16.q1k chr12 260 329 7326 7395 F 70 85.71 1509 reject_low 293 ALIGNMENT 0 YS2-4j16.q1k chr02 345 607 2218 2217 F 263 0.00 1509 reject_low 105 ALIGNMENT 47 YS2-4j16.q1k chr07 325 235 1089293 1089383 C 91 84.62 1509 reject_low 209 ALIGNMENT 29 YS2-4j16.p1k chr06 697 665 2915 2947 C 33 96.97 1366 reject_low 266 ALIGNMENT 0 YS2-4j16.q1k chr08 62 90 1806 1805 F 29 0.00 1509 reject_low 228 ALIGNMENT 0 YS2-4j16.q1k chr12 345 607 1875 1874 F 263 0.00 1509 reject_low 281 ALIGNMENT 0 YS2-4j16.q1k chr12 607 345 1069655 1069654 C 263 0.00 1509 reject_low 13 ALIGNMENT 47 YS2-4j16.q1k chr12 235 325 7337 7427 F 91 84.62 1509|9,0 reject_low 290 ALIGNMENT 0 YS2-4j16.q1k chr12 259 62 1076690 1076689 C 198 0.00 1509 reject_low 45 ALIGNMENT 131 YS2-4j16.q1k chr12 91 288 2018 2215 F 198 89.90 1509 reject_low 277 ALIGNMENT 0 YS2-4j16.q1k chr07 607 326 1089294 1089293 C 282 0.00 1509 reject_low 209 ALIGNMENT 0 YS2-4j16.q1k chr06 62 78 1072 1071 F 17 0.00 1509 reject_low 178 ALIGNMENT 0 YS2-4j16.q1k chr08 82 62 560731 560730 C 21 0.00 1509 reject_low 74 ALIGNMENT 80 YS2-4j16.q1k chr06 187 344 892 1049 F 158 84.18 1509 reject_low 155 ALIGNMENT 0 YS2-4j16.q1k chr12 62 78 7577 7576 F 17 0.00 1509 reject_low 283 ALIGNMENT 0 YS2-4j16.q1k chr16 607 341 946091 946090 C 267 0.00 1509 reject_low 254 ALIGNMENT 0 YS2-4j16.q1k chr12 217 607 7750 7749 F 391 0.00 1509 reject_low 285 ALIGNMENT 0 YS2-4j16.q1k chr12 253 607 7750 7749 F 355 0.00 1509 reject_low 283 ALIGNMENT 0 YS2-4j16.q1k chr12 62 151 1683 1682 F 90 0.00 1509 reject_low 281 ALIGNMENT 0 YS2-4j16.q1k chr07 79 62 1089107 1089106 C 18 0.00 1509 reject_low 174 ALIGNMENT 64 YS2-4j16.q1k chr06 223 340 892 1009 F 118 85.59 1509 reject_low 169 ALIGNMENT 70 YS2-4j16.q1k chr05 199 325 1481 1607 F 127 85.83 1509 reject_low 32 ALIGNMENT 431 YS2-4j16.q1k chr12 838 83 1075786 1076542 C 756 87.30 1509 ambiguous_tel 3 ALIGNMENT 0 YS2-4j16.q1k chr16 326 607 1584 1583 F 282 0.00 1509 reject_low 215 ALIGNMENT 0 YS2-4j16.q1k chr16 79 62 946099 946098 C 18 0.00 1509 reject_low 260 ALIGNMENT 0 YS2-4j16.q1k chr13 345 607 1931 1930 F 263 0.00 1509 reject_low 55 ALIGNMENT 39 YS2-4j16.q1k chr02 260 329 1486 1555 F 70 85.71 1509 reject_low 229 ALIGNMENT 0 YS2-4j16.q1k chr12 243 244 1070007 1076273 C 0 0.00 1509 reject_low 46 ALIGNMENT 0 YS2-4j16.q1k chr12 90 62 1076463 1076462 C 29 0.00 1509 reject_low 20 ALIGNMENT 131 YS2-4j16.q1k chr14 91 288 1801 1998 F 198 89.90 1509 reject_low 115 ALIGNMENT 0 YS2-4j16.q1k chr14 62 90 1801 1800 F 29 0.00 1509 reject_low 115 ALIGNMENT 0 YS2-4j16.q1k chr15 234 62 1089643 1089642 C 173 0.00 1509 reject_low 214 ALIGNMENT 53 YS2-4j16.q1k chr04 289 199 1530387 1530477 C 91 86.81 1509 reject_low 185 ALIGNMENT 0 YS2-4j16.q1k chr08 186 607 1900 1899 F 422 0.00 1509 reject_low 228 ALIGNMENT 0 YS2-4j16.q1k chr08 349 607 1847 1846 F 259 0.00 1509 reject_low 126 ALIGNMENT 0 YS2-4j16.q1k chr15 259 62 1089654 1089653 C 198 0.00 1509 reject_low 236 ALIGNMENT 0 YS2-4j16.q1k chr14 62 259 1574 1573 F 198 0.00 1509 reject_low 235 ALIGNMENT 0 YS2-4j16.q1k chr13 62 82 1778 1777 F 21 0.00 1509 reject_low 65 ALIGNMENT 0 YS2-4j16.q1k chr08 607 290 560741 560740 C 318 0.00 1509 reject_low 188 ALIGNMENT 0 YS2-4j16.q1k chr08 607 345 560470 560469 C 263 0.00 1509 reject_low 74 ALIGNMENT 24 YS2-4j16.p1k chr12 644 615 9442 9471 C 30 93.33 1366 reject_low 251,267,270,273,274,278,282,283,285,287,288,290,291,292,293 ALIGNMENT 0 YS2-4j16.p1k chr13 495 62 3886 3885 C 434 0.00 1366 reject_low 252 ALIGNMENT 0 YS2-4j16.q1k chr15 78 62 1089295 1089294 C 17 0.00 1509 reject_low 223 ALIGNMENT 39 YS2-4j16.q1k chr12 329 260 1076620 1076689 C 70 85.71 1509 reject_low 45 ALIGNMENT 0 YS2-4j16.q1k chr02 62 79 2026 2025 F 18 0.00 1509 reject_low 117 ALIGNMENT 0 YS2-4j16.q1k chr12 62 82 1902 1901 F 21 0.00 1509 reject_low 269 ALIGNMENT 37 YS2-4j16.q1k chr02 91 158 2325 2392 F 68 86.76 1509 reject_low 226 ALIGNMENT 138 YS2-4j16.q1k chr16 80 340 1519 1779 F 261 85.44 1509 reject_low 94 ALIGNMENT 0 YS2-4j16.q1k chr08 62 151 1651 1650 F 90 0.00 1509 reject_low 126 ALIGNMENT 0 YS2-4j16.q1k chr16 607 217 945963 945962 C 391 0.00 1509 reject_low 260 ALIGNMENT 0 YS2-4j16.q1k chr05 78 62 575067 575066 C 17 0.00 1509 reject_low 149 ALIGNMENT 0 YS2-4j16.p1k chr02 614 553 4138 4153 C 62 0.00 1366 reject_low 265 ALIGNMENT 0 YS2-4j16.q1k chr08 62 198 1662 1661 F 137 0.00 1509 reject_low 167 ALIGNMENT 0 YS2-4j16.q1k chr04 90 62 1530262 1530261 C 29 0.00 1509 reject_low 118 ALIGNMENT 143 YS2-4j16.q1k chr09 80 266 2046 2232 F 187 93.58 1509 reject_low 242 ALIGNMENT 188 YS2-4j16.q1k chr08 340 34 560581 560887 C 307 87.95 1509 reject_low 59 ALIGNMENT 50 YS2-4j16.q1k chr13 80 216 1955 2091 F 137 80.29 1509 reject_low 175 ALIGNMENT 50 YS2-4j16.q1k chr12 80 216 2079 2215 F 137 80.29 1509|0,9 reject_low 292 ALIGNMENT 77 YS2-4j16.q1k chr16 152 289 1483 1620 F 138 86.23 1509 reject_low 165 ALIGNMENT 0 YS2-4j16.q1k chr12 62 82 7437 7436 F 21 0.00 1509 reject_low 270 ALIGNMENT 440 YS2-4j16.q1k chr13 83 838 1814 2570 F 756 87.70 1509 reject_low 252 ALIGNMENT 138 YS2-4j16.q1k chr12 340 80 1069730 1069990 C 261 85.44 1509 reject_low 15 ALIGNMENT 29 YS2-4j16.p1k chr16 665 697 944267 944299 F 33 96.97 1366 reject_low 240,244,249,253,254,255,256,257,258,259,260,261,262,263 ALIGNMENT 0 YS2-4j16.q1k chr12 607 290 1069890 1069889 C 318 0.00 1509 reject_low 47 ALIGNMENT 0 YS2-4j16.q1k chr02 62 79 1990 1989 F 18 0.00 1509 reject_low 84 ALIGNMENT 0 YS2-4j16.q1k chr08 607 145 560418 560417 C 463 0.00 1509 reject_low 239 ALIGNMENT 0 YS2-4j16.q1k chr02 345 607 2326 2325 F 263 0.00 1509 reject_low 107 ALIGNMENT 50 YS2-4j16.p1k chr06 771 719 2872 2924 C 53 98.11 1366 reject_low 266 ALIGNMENT 0 YS2-4j16.p1k chr05 860 364 4556 4555 C 497 0.00 1366 reject_low 50,51 ALIGNMENT 64 YS2-4j16.q1k chr16 340 258 946270 946352 C 83 92.77 1509 reject_low 259 ALIGNMENT 0 YS2-4j16.q1k chr10 62 79 1957 1956 F 18 0.00 1509 reject_low 81 ALIGNMENT 0 YS2-4j16.q1k chr05 62 79 1650 1649 F 18 0.00 1509 reject_low 22 ALIGNMENT 39 YS2-4j16.q1k chr08 329 260 560772 560841 C 70 85.71 1509 reject_low 233 ALIGNMENT 35 YS2-4j16.q1k chr06 295 344 892 941 F 50 90.00 1509 reject_low 217 ALIGNMENT 53 YS2-4j16.q1k chr05 289 199 575216 575306 C 91 86.81 1509 reject_low 186 ALIGNMENT 0 YS2-4j16.q1k chr13 289 607 2091 2090 F 319 0.00 1509 reject_low 114 ALIGNMENT 0 YS2-4j16.q1k chr16 217 607 1907 1906 F 391 0.00 1509 reject_low 177 ALIGNMENT 437 YS2-4j16.q1k chr16 83 777 1630 2329 F 695 88.78 1509 ambiguous_tel 5 ALIGNMENT 0 YS2-4j16.q1k chr09 341 607 1802 1801 F 267 0.00 1509 reject_low 172 ALIGNMENT 49 YS2-4j16.q1k chr09 91 308 2165 2382 F 218 75.23 1509 reject_low 193 ALIGNMENT 0 YS2-4j16.p1k chr08 664 645 3643 3638 C 20 0.00 1366 reject_low 241 ALIGNMENT 1014 YS2-4j16.p1k chr12 30 1179 1073439 1074595 F 1150 96.43 1366 ambiguous_tel 3 ALIGNMENT 0 YS2-4j16.q1k chr08 62 79 1723 1722 F 18 0.00 1509 reject_low 123 ALIGNMENT 0 YS2-4j16.q1k chr02 62 90 2217 2216 F 29 0.00 1509 reject_low 86 ALIGNMENT 0 YS2-4j16.q1k chr14 290 607 1675 1674 F 318 0.00 1509 reject_low 190 ALIGNMENT 0 YS2-4j16.q1k chr08 607 253 560418 560417 C 355 0.00 1509 reject_low 140 ALIGNMENT 0 YS2-4j16.q1k chr09 62 259 1686 1685 F 198 0.00 1509 reject_low 248 ALIGNMENT 0 YS2-4j16.q1k chr05 90 62 575091 575090 C 29 0.00 1509 reject_low 112 ALIGNMENT 0 YS2-4j16.q1k chr04 607 345 1530117 1530116 C 263 0.00 1509 reject_low 68 ALIGNMENT 0 YS2-4j16.q1k chr05 607 290 575181 575180 C 318 0.00 1509 reject_low 159 ALIGNMENT 0 YS2-4j16.p1k chr12 271 328 1067096 1067093 F 58 0.00 1366 reject_low 9,11,12,13,14,15,16,17,18,19,20,36,37,38,39,40,41,42,43,44,45,46,47,48,49 ALIGNMENT 39 YS2-4j16.q1k chr05 329 260 575248 575317 C 70 85.71 1509 reject_low 231 ALIGNMENT 0 YS2-4j16.q1k chr09 347 607 2276 2275 F 261 0.00 1509 reject_low 124 ALIGNMENT 0 YS2-4j16.q1k chr05 62 79 1830 1829 F 18 0.00 1509 reject_low 33 ALIGNMENT 87 YS2-4j16.q1k chr02 79 344 1881 2146 F 266 78.57 1509 reject_low 137 ALIGNMENT 0 YS2-4j16.q1k chr09 341 607 1838 1837 F 267 0.00 1509 reject_low 170 ALIGNMENT 0 YS2-4j16.q1k chr14 62 82 1685 1684 F 21 0.00 1509 reject_low 66 ALIGNMENT 0 YS2-4j16.q1k chr12 259 145 1070027 1076264 C 115 0.00 1509 reject_low 49 ALIGNMENT 0 YS2-4j16.q1k chr12 345 607 2127 2126 F 263 0.00 1509 reject_low 272 ALIGNMENT 0 YS2-4j16.q1k chr06 237 607 1265 1264 F 371 0.00 1509 reject_low 245 ALIGNMENT 0 YS2-4j16.q1k chr07 607 290 1089258 1089257 C 318 0.00 1509 reject_low 160 ALIGNMENT 0 YS2-4j16.p1k chr16 698 718 944300 944289 F 21 0.00 1366 reject_low 240,244,249,253,254,255,256,257,258,259,260,261,262,263 ALIGNMENT 195 YS2-4j16.q1k chr13 34 344 1621 1931 F 311 88.42 1509 reject_low 55 ALIGNMENT 84 YS2-4j16.q1k chr08 344 116 560613 560841 C 229 79.91 1509 reject_low 144 ALIGNMENT 153 YS2-4j16.q1k chr02 80 325 1522 1767 F 246 88.62 1509 reject_low 78 ALIGNMENT 997 YS2-4j16.p1k chr10 1205 30 4009 5196 C 1176 95.66 1366 ambiguous_tel 6 ALIGNMENT 0 YS2-4j16.q1k chr08 198 62 560831 560830 C 137 0.00 1509 reject_low 188 ALIGNMENT 0 YS2-4j16.q1k chr09 62 80 2239 2238 F 19 0.00 1509 reject_low 246 ALIGNMENT 53 YS2-4j16.p1k chr16 496 552 944168 944224 F 57 98.25 1366 reject_low 240,244,249,253,254,255,256,257,258,259,260,261,262,263 ALIGNMENT 195 YS2-4j16.q1k chr04 344 34 1530224 1530534 C 311 88.42 1509 reject_low 52 ALIGNMENT 77 YS2-4j16.q1k chr08 289 152 560704 560841 C 138 86.23 1509 reject_low 161 ALIGNMENT 0 YS2-4j16.q1k chr12 62 79 7614 7613 F 18 0.00 1509 reject_low 285 ALIGNMENT 0 YS2-4j16.q1k chr02 326 607 2271 2270 F 282 0.00 1509 reject_low 117 ALIGNMENT 0 YS2-4j16.q1k chr04 607 341 1530193 1530192 C 267 0.00 1509 reject_low 88 ALIGNMENT 47 YS2-4j16.q1k chr04 216 80 1530064 1530200 C 137 79.56 1509 reject_low 182 ALIGNMENT 0 YS2-4j16.q1k chr05 326 607 1535 1534 F 282 0.00 1509 reject_low 51 ALIGNMENT 0 YS2-4j16.q1k chr16 607 345 946051 946050 C 263 0.00 1509 reject_low 249 ALIGNMENT 0 YS2-4j16.q1k chr16 289 607 1907 1906 F 319 0.00 1509 reject_low 116 ALIGNMENT 0 YS2-4j16.q1k chr06 62 90 1048 1047 F 29 0.00 1509 reject_low 181 ALIGNMENT 197 YS2-4j16.q1k chr07 344 83 1089022 1089283 C 262 92.75 1509 reject_low 64 ALIGNMENT 0 YS2-4j16.q1k chr13 253 607 2091 2090 F 355 0.00 1509 reject_low 151 ALIGNMENT 43 YS2-4j16.q1k chr05 158 91 574915 574982 C 68 89.71 1509 reject_low 199 ALIGNMENT 0 YS2-4j16.q1k chr13 345 607 1895 1894 F 263 0.00 1509 reject_low 145 ALIGNMENT 107 YS2-4j16.q1k chr16 344 114 946122 946352 C 231 83.12 1509 reject_low 255 ALIGNMENT 0 YS2-4j16.p1k chr06 614 553 2974 2989 C 62 0.00 1366 reject_low 266 ALIGNMENT 0 YS2-4j16.p1k chr12 614 553 3937 3952 C 62 0.00 1366 reject_low 250,268,269,271,272,275,276,277,279,280,281,284,286,289 ALIGNMENT 434 YS2-4j16.q1k chr16 777 83 945540 946239 C 695 88.63 1509 reject_low 240 ALIGNMENT 0 YS2-4j16.p1k chr12 495 62 9545 9544 C 434 0.00 1366 reject_low 251,267,270,273,274,278,282,283,285,287,288,290,291,292,293 ALIGNMENT 126 YS2-4j16.q1k chr02 80 325 2026 2271 F 246 84.96 1509 reject_low 117 ALIGNMENT 43 YS2-4j16.q1k chr13 91 158 2002 2069 F 68 89.71 1509 reject_low 201 ALIGNMENT 0 YS2-4j16.p1k chr08 698 718 558753 558742 F 21 0.00 1366 reject_low 264 ALIGNMENT 0 YS2-4j16.q1k chr02 62 78 1953 1952 F 17 0.00 1509 reject_low 105 ALIGNMENT 47 YS2-4j16.q1k chr08 325 235 560740 560830 C 91 84.62 1509 reject_low 211 ALIGNMENT 0 YS2-4j16.q1k chr02 62 234 1497 1496 F 173 0.00 1509 reject_low 206 ALIGNMENT 0 YS2-4j16.q1k chr15 607 159 1089252 1089251 C 449 0.00 1509 reject_low 203 ALIGNMENT 0 YS2-4j16.q1k chr08 607 289 560418 560417 C 319 0.00 1509 reject_low 87 ALIGNMENT 0 YS2-4j16.q1k chr02 62 82 1705 1704 F 21 0.00 1509 reject_low 76 ALIGNMENT 0 YS2-4j16.q1k chr16 159 607 1885 1884 F 449 0.00 1509 reject_low 204 ALIGNMENT 0 YS2-4j16.p1k chr12 718 698 9423 9412 C 21 0.00 1366 reject_low 251,267,270,273,274,278,282,283,285,287,288,290,291,292,293 ALIGNMENT 0 YS2-4j16.q1k chr12 62 79 2079 2078 F 18 0.00 1509 reject_low 292 ALIGNMENT 0 YS2-4j16.p1k chr02 664 645 4112 4107 C 20 0.00 1366 reject_low 265 ALIGNMENT 0 YS2-4j16.q1k chr02 326 607 1587 1586 F 282 0.00 1509 reject_low 206 ALIGNMENT 0 YS2-4j16.q1k chr06 345 607 977 976 F 263 0.00 1509 reject_low 171 ALIGNMENT 0 YS2-4j16.q1k chr02 62 90 2325 2324 F 29 0.00 1509 reject_low 226 ALIGNMENT 0 YS2-4j16.q1k chr05 62 90 1805 1804 F 29 0.00 1509 reject_low 10 ALIGNMENT 143 YS2-4j16.q1k chr06 34 346 847 1159 F 313 82.75 1509 reject_low 62 ALIGNMENT 0 YS2-4j16.q1k chr15 79 62 1089618 1089617 C 18 0.00 1509 reject_low 93 ALIGNMENT 31 YS2-4j16.q1k chr08 144 91 560417 560470 C 54 87.04 1509 reject_low 239 ALIGNMENT 0 YS2-4j16.q1k chr16 607 159 945985 945984 C 449 0.00 1509 reject_low 261 ALIGNMENT 0 YS2-4j16.q1k chr14 253 607 1998 1997 F 355 0.00 1509 reject_low 152 ALIGNMENT 0 YS2-4j16.q1k chr10 62 276 1902 1901 F 215 0.00 1509 reject_low 205 ALIGNMENT 1010 YS2-4j16.p1k chr07 30 1205 1086144 1087330 F 1176 95.75 1366 ambiguous_tel 1 ALIGNMENT 0 YS2-4j16.q1k chr16 78 62 946028 946027 C 17 0.00 1509 reject_low 262 ALIGNMENT 0 YS2-4j16.q1k chr07 607 345 1089167 1089166 C 263 0.00 1509 reject_low 143 ALIGNMENT 47 YS2-4j16.q1k chr05 325 235 575216 575306 C 91 84.62 1509 reject_low 208 ALIGNMENT 0 YS2-4j16.q1k chr07 115 62 1089395 1089394 C 54 0.00 1509 reject_low 143 ALIGNMENT 195 YS2-4j16.q1k chr15 344 34 1089389 1089699 C 311 88.42 1509 reject_low 57 ALIGNMENT 0 YS2-4j16.q1k chr02 289 607 2414 2413 F 319 0.00 1509 reject_low 86 ALIGNMENT 77 YS2-4j16.q1k chr12 289 152 1069889 1070026 C 138 86.23 1509|0,4 reject_low 47 ALIGNMENT 409 YS2-4j16.q1k chr09 80 840 2118 2867 F 761 86.07 1509 ambiguous_tel 7 ALIGNMENT 0 YS2-4j16.q1k chr08 79 62 560554 560553 C 18 0.00 1509 reject_low 197 ALIGNMENT 77 YS2-4j16.q1k chr16 79 252 1734 1907 F 174 82.76 1509 reject_low 153 ALIGNMENT 0 YS2-4j16.q1k chr08 234 62 560831 560830 C 173 0.00 1509 reject_low 211 ALIGNMENT 0 YS2-4j18.p1k vc_1 957 62 2106 2105 C 896 0.00 1396 reject_low 1 ALIGNMENT 108 YS2-4j18.p1k vc_4 958 1167 5871 6098 F 210 86.67 1396 reject_low 4 ALIGNMENT 0 YS2-4j18.p1k vc_7 62 957 100 99 F 896 0.00 1396 reject_low 6 ALIGNMENT 0 YS2-4j18.p1k vc_3 957 62 2106 2105 C 896 0.00 1396 reject_low 3 ALIGNMENT 0 YS2-4j18.p1k vc_5 957 62 5026 5025 C 896 0.00 1396 reject_low 5 ALIGNMENT 855 YS2-4j18.p1k chr10 39 940 270882 271784 F 902 99.56 1396 accept 0 ALIGNMENT 26 YS2-4j18.p1k vc_1 988 958 2441 2472 C 31 96.77 1396 reject_low 8 ALIGNMENT 26 YS2-4j18.p1k vc_3 988 958 2441 2472 C 31 96.77 1396 reject_low 9 ALIGNMENT 0 YS2-4j18.p1k vc_2 957 62 2106 2105 C 896 0.00 1396 reject_low 2 ALIGNMENT 108 YS2-4j18.p1k vc_7 958 1167 13562 13789 F 210 86.67 1396 reject_low 7 ALIGNMENT 108 YS2-4j18.p1k vc_2 1167 958 1878 2105 C 210 86.67 1396 reject_low 2 ALIGNMENT 108 YS2-4j18.p1k vc_7 958 1167 100 327 F 210 86.67 1396 reject_low 6 ALIGNMENT 0 YS2-4j18.p1k vc_7 62 957 13562 13561 F 896 0.00 1396 reject_low 7 ALIGNMENT 0 YS2-4j18.p1k vc_1 957 62 2473 2472 C 896 0.00 1396 reject_low 8 ALIGNMENT 0 YS2-4j18.p1k vc_4 62 957 5871 5870 F 896 0.00 1396 reject_low 4 ALIGNMENT 108 YS2-4j18.p1k vc_1 1167 958 1878 2105 C 210 86.67 1396 reject_low 1 ALIGNMENT 108 YS2-4j18.p1k vc_3 1167 958 1878 2105 C 210 86.67 1396 reject_low 3 ALIGNMENT 108 YS2-4j18.p1k vc_5 1167 958 4798 5025 C 210 86.67 1396 reject_low 5 ALIGNMENT 0 YS2-4j18.p1k vc_3 957 62 2473 2472 C 896 0.00 1396 reject_low 9 ALIGNMENT 51 YS2-4j19.q1k vc_4 311 493 1879 2052 F 183 80.87 1088 reject_vc 10 ALIGNMENT 0 YS2-4j19.p1k chr12 226 243 828203 828202 F 18 0.00 243 accept 0 ALIGNMENT 0 YS2-4j19.q1k vc_4 238 62 113 112 C 177 0.00 1088 reject_vc 8 ALIGNMENT 47 YS2-4j19.q1k vc_4 305 239 6275 6339 C 67 92.54 1088 reject_vc 9 ALIGNMENT 288 YS2-4j19.q1k vc_4 431 1 5232 5654 C 431 90.95 1088 reject_vc 3 ALIGNMENT 47 YS2-4j19.q1k vc_4 239 305 1548 1612 F 67 92.54 1088 reject_vc 10 ALIGNMENT 0 YS2-4j19.q1k vc_4 238 62 6340 6339 C 177 0.00 1088 reject_vc 9 ALIGNMENT 255 YS2-4j19.q1k vc_3 1 305 2689 2990 F 305 95.41 1088 reject_vc 6 ALIGNMENT 255 YS2-4j19.q1k vc_2 1 305 2322 2623 F 305 95.41 1088 reject_vc 5 ALIGNMENT 0 YS2-4j19.q1k vc_7 307 306 4700 4922 C 2 0.00 1088 reject_vc 7 ALIGNMENT 313 YS2-4j19.q1k vc_7 493 1 2089 2569 C 493 89.86 1088 reject_vc 2 ALIGNMENT 255 YS2-4j19.q1k vc_1 1 305 2689 2990 F 305 95.41 1088 reject_vc 4 ALIGNMENT 194 YS2-4j19.p1k chr12 31 225 828009 828203 F 195 100.00 243 accept 0 ALIGNMENT 207 YS2-4j19.q1k vc_7 305 53 4923 5172 C 253 94.86 1088 reject_vc 7 ALIGNMENT 38 YS2-4j19.q1k vc_7 431 308 4583 4699 C 124 82.26 1088 reject_vc 7 ALIGNMENT 313 YS2-4j19.q1k vc_5 1 493 2556 3036 F 493 89.86 1088 reject_vc 1 ALIGNMENT 0 YS2-4j19.q1k vc_4 306 310 1613 1878 F 5 0.00 1088 reject_vc 10 ALIGNMENT 47 YS2-4j19.q1k vc_4 305 239 48 112 C 67 92.54 1088 reject_vc 8 ALIGNMENT 0 YS2-4j19.q1k vc_4 62 238 1548 1547 F 177 0.00 1088 reject_vc 10 ALIGNMENT 39 YS2-4j21.q1k vc_5 587 549 5025 5063 C 39 100.00 1386 reject_low 13 ALIGNMENT 0 YS2-4j21.q1k vc_7 77 549 13525 13524 F 473 0.00 1386 reject_low 14 ALIGNMENT 0 YS2-4j21.q1k vc_3 546 77 2513 2512 C 470 0.00 1386 reject_low 12 ALIGNMENT 0 YS2-4j21.q1k vc_4 77 586 126 125 F 510 0.00 1386 reject_low 7 ALIGNMENT 0 YS2-4j21.q1k vc_3 682 588 2473 2472 C 95 0.00 1386 reject_low 12 ALIGNMENT 206 YS2-4j21.q1k vc_3 587 975 2531 2920 F 389 86.38 1386 reject_low 3 ALIGNMENT 0 YS2-4j21.q1k vc_1 77 586 2531 2530 F 510 0.00 1386 reject_low 1 ALIGNMENT 206 YS2-4j21.q1k vc_1 587 975 2531 2920 F 389 86.38 1386 reject_low 1 ALIGNMENT 38 YS2-4j21.q1k vc_7 550 587 13525 13562 F 38 100.00 1386 reject_low 14 ALIGNMENT 0 YS2-4j21.q1k vc_2 682 588 2106 2105 C 95 0.00 1386 reject_low 11 ALIGNMENT 206 YS2-4j21.q1k vc_2 587 975 2164 2553 F 389 86.38 1386 reject_low 2 ALIGNMENT 41 YS2-4j21.q1k vc_4 547 587 5831 5871 F 41 100.00 1386 reject_low 8 ALIGNMENT 0 YS2-4j21.q1k vc_4 588 587 5872 6353 F 0 0.00 1386 reject_low 8 ALIGNMENT 0 YS2-4j21.q1k vc_5 682 585 2 1 C 98 0.00 1386 reject_low 15 ALIGNMENT 0 YS2-4j21.q1k vc_2 546 77 2146 2145 C 470 0.00 1386 reject_low 11 ALIGNMENT 199 YS2-4j21.q1k vc_4 975 587 5421 5812 C 389 86.63 1386 reject_low 6 ALIGNMENT 0 YS2-4j21.p1k chr14 539 556 320328 320327 F 18 0.00 556 accept 0 ALIGNMENT 443 YS2-4j21.q1k chr14 544 37 319828 320328 C 508 98.43 1386 accept 0 ALIGNMENT 457 YS2-4j21.p1k chr14 33 538 319825 320328 F 506 99.01 556 accept 0 ALIGNMENT 0 YS2-4j21.q1k vc_1 546 77 2513 2512 C 470 0.00 1386 reject_low 10 ALIGNMENT 0 YS2-4j21.q1k chr14 682 545 319829 319828 C 138 0.00 1386 accept 0 ALIGNMENT 0 YS2-4j21.q1k vc_5 77 586 2398 2397 F 510 0.00 1386 reject_low 4 ALIGNMENT 0 YS2-4j21.q1k vc_4 77 546 5831 5830 F 470 0.00 1386 reject_low 8 ALIGNMENT 0 YS2-4j21.q1k vc_5 548 77 37 36 C 472 0.00 1386 reject_low 15 ALIGNMENT 0 YS2-4j21.q1k vc_4 586 77 1535 1534 C 510 0.00 1386 reject_low 9 ALIGNMENT 36 YS2-4j21.q1k vc_5 584 549 1 36 C 36 100.00 1386 reject_low 15 ALIGNMENT 0 YS2-4j21.q1k vc_4 586 77 5813 5812 C 510 0.00 1386 reject_low 6 ALIGNMENT 87 YS2-4j21.q1k vc_4 675 587 1446 1534 C 89 100.00 1386 reject_low 9 ALIGNMENT 41 YS2-4j21.q1k vc_2 587 547 2105 2145 C 41 100.00 1386 reject_low 11 ALIGNMENT 0 YS2-4j21.q1k vc_1 682 588 2473 2472 C 95 0.00 1386 reject_low 10 ALIGNMENT 0 YS2-4j21.q1k vc_2 77 586 2164 2163 F 510 0.00 1386 reject_low 2 ALIGNMENT 41 YS2-4j21.q1k vc_1 587 547 2472 2512 C 41 100.00 1386 reject_low 10 ALIGNMENT 153 YS2-4j21.q1k vc_4 587 748 126 287 F 162 98.77 1386 reject_low 7 ALIGNMENT 0 YS2-4j21.q1k vc_7 586 77 2728 2727 C 510 0.00 1386 reject_low 5 ALIGNMENT 205 YS2-4j21.q1k vc_7 964 587 2350 2727 C 378 86.77 1386 reject_low 5 ALIGNMENT 206 YS2-4j21.q1k vc_5 587 975 2398 2787 F 389 86.38 1386 reject_low 4 ALIGNMENT 0 YS2-4j21.q1k vc_7 588 682 13562 13561 F 95 0.00 1386 reject_low 14 ALIGNMENT 41 YS2-4j21.q1k vc_3 587 547 2472 2512 C 41 100.00 1386 reject_low 12 ALIGNMENT 0 YS2-4j21.q1k vc_3 77 586 2531 2530 F 510 0.00 1386 reject_low 3 ALIGNMENT 0 YS2-4j21.q1k vc_5 548 77 5064 5063 C 472 0.00 1386 reject_low 13 ALIGNMENT 153 YS2-4j21.q1k vc_4 587 748 6353 6514 F 162 98.77 1386|1,0 reject_low 8 ALIGNMENT 0 YS2-4j21.q1k vc_5 682 588 5026 5025 C 95 0.00 1386 reject_low 13 ALIGNMENT 0 YS2-4j23.q1k vc_4 77 282 126 125 F 206 0.00 1562 reject_vc 10 ALIGNMENT 132 YS2-4j23.q1k vc_2 283 549 2164 2421 F 267 85.39 1562 reject_vc 5 ALIGNMENT 0 YS2-4j23.q1k vc_2 77 282 2164 2163 F 206 0.00 1562 reject_vc 5 ALIGNMENT 174 YS2-4j23.p1k chr01 233 43 222958 223148 C 191 98.43 250 ambiguous_trans_ua 0 ALIGNMENT 31 YS2-4j23.q1k vc_2 283 243 2105 2145 C 41 92.68 1562 reject_vc 14 ALIGNMENT 169 YS2-4j23.q1k chr01 43 233 222958 223148 F 191 98.95 1562 ambiguous_trans_ua 1 ALIGNMENT 141 YS2-4j23.q1k chr08 79 233 549638 549792 F 155 99.35 1562|3,0 ambiguous_trans 3 ALIGNMENT 132 YS2-4j23.q1k vc_4 549 283 5553 5812 C 267 85.39 1562 reject_vc 7 ALIGNMENT 0 YS2-4j23.q1k chr08 234 260 549792 549791 F 27 0.00 1562 ambiguous_trans 3 ALIGNMENT 0 YS2-4j23.q1k vc_1 242 77 2513 2512 C 166 0.00 1562 reject_vc 13 ALIGNMENT 0 YS2-4j23.q1k vc_5 244 77 5064 5063 C 168 0.00 1562 reject_vc 16 ALIGNMENT 0 YS2-4j23.q1k vc_4 77 242 5831 5830 F 166 0.00 1562 reject_vc 11 ALIGNMENT 70 YS2-4j23.q1k vc_4 369 283 1448 1534 C 87 94.25 1562 reject_vc 12 ALIGNMENT 132 YS2-4j23.q1k vc_1 283 549 2531 2788 F 267 85.39 1562 reject_vc 4 ALIGNMENT 115 YS2-4j23.q1k vc_4 283 444 126 287 F 162 90.74 1562 reject_vc 10 ALIGNMENT 30 YS2-4j23.q1k vc_5 283 245 5025 5063 C 39 92.31 1562 reject_vc 16 ALIGNMENT 26 YS2-4j23.q1k vc_5 277 245 4 36 C 33 93.94 1562 reject_vc 17 ALIGNMENT 115 YS2-4j23.q1k vc_4 283 444 6353 6514 F 162 90.74 1562|1,0 reject_vc 11 ALIGNMENT 0 YS2-4j23.q1k chr08 82 81 543608 549640 F 0 0.00 1562 ambiguous_trans 3 ALIGNMENT 0 YS2-4j23.q1k vc_4 284 283 5872 6353 F 0 0.00 1562 reject_vc 11 ALIGNMENT 33 YS2-4j23.q1k chr08 43 84 543569 543610 F 42 97.62 1562|0,3 ambiguous_trans 3 ALIGNMENT 31 YS2-4j23.q1k vc_4 243 283 5831 5871 F 41 92.68 1562 reject_vc 11 ALIGNMENT 0 YS2-4j23.q1k vc_5 244 77 37 36 C 168 0.00 1562 reject_vc 17 ALIGNMENT 0 YS2-4j23.q1k vc_5 77 282 2398 2397 F 206 0.00 1562 reject_vc 8 ALIGNMENT 0 YS2-4j23.q1k vc_3 77 282 2531 2530 F 206 0.00 1562 reject_vc 6 ALIGNMENT 131 YS2-4j23.q1k vc_7 549 283 2470 2727 C 267 85.39 1562 reject_vc 9 ALIGNMENT 31 YS2-4j23.q1k vc_3 283 243 2472 2512 C 41 92.68 1562 reject_vc 15 ALIGNMENT 142 YS2-4j23.p1k chr08 197 43 549638 549792 C 155 98.06 250|3,0 ambiguous_trans 2 ALIGNMENT 0 YS2-4j23.q1k vc_4 282 77 5813 5812 C 206 0.00 1562 reject_vc 7 ALIGNMENT 0 YS2-4j23.q1k vc_2 242 77 2146 2145 C 166 0.00 1562 reject_vc 14 ALIGNMENT 0 YS2-4j23.q1k chr01 234 260 223148 223147 F 27 0.00 1562 ambiguous_trans_ua 1 ALIGNMENT 132 YS2-4j23.q1k vc_5 283 549 2398 2655 F 267 85.39 1562 reject_vc 8 ALIGNMENT 35 YS2-4j23.p1k chr08 233 192 543569 543610 C 42 100.00 250|0,3 ambiguous_trans 2 ALIGNMENT 0 YS2-4j23.q1k vc_4 282 77 1535 1534 C 206 0.00 1562 reject_vc 12 ALIGNMENT 0 YS2-4j23.q1k vc_3 242 77 2513 2512 C 166 0.00 1562 reject_vc 15 ALIGNMENT 0 YS2-4j23.p1k chr08 250 234 543570 543569 C 17 0.00 250 ambiguous_trans 2 ALIGNMENT 132 YS2-4j23.q1k vc_3 283 549 2531 2788 F 267 85.39 1562 reject_vc 6 ALIGNMENT 0 YS2-4j23.p1k chr08 194 195 543608 549640 C 0 0.00 250 ambiguous_trans 2 ALIGNMENT 0 YS2-4j23.q1k vc_7 282 77 2728 2727 C 206 0.00 1562 reject_vc 9 ALIGNMENT 0 YS2-4j23.p1k chr01 250 234 222959 222958 C 17 0.00 250 ambiguous_trans_ua 0 ALIGNMENT 31 YS2-4j23.q1k vc_1 283 243 2472 2512 C 41 92.68 1562 reject_vc 13 ALIGNMENT 0 YS2-4j23.q1k vc_1 77 282 2531 2530 F 206 0.00 1562 reject_vc 4 ALIGNMENT 649 YS2-4j24.q1k chr16 30 868 425060 425883 F 839 93.68 1421 accept 0 ALIGNMENT 1033 YS2-4k01.p1k chr04 38 1236 760018 761229 F 1199 96.83 1369 accept 0 ALIGNMENT 507 YS2-4k01.q1k chr04 778 42 764456 765186 C 737 90.77 1642 accept 0 ALIGNMENT 40 YS2-4k02.q1k vc_1 215 176 2472 2511 C 40 100.00 1564 reject_low 11 ALIGNMENT 156 YS2-4k02.q1k vc_4 215 376 126 287 F 162 99.38 1564 reject_low 7 ALIGNMENT 0 YS2-4k02.q1k vc_4 214 92 5813 5812 C 123 0.00 1564 reject_low 6 ALIGNMENT 347 YS2-4k02.q1k vc_2 215 673 2164 2615 F 459 93.46 1564 reject_low 3 ALIGNMENT 84 YS2-4k02.q1k vc_4 303 215 1446 1534 C 89 98.88 1564 reject_low 10 ALIGNMENT 129 YS2-4k02.q1k chr10 37 175 426332 426471 F 139 97.84 1564 accept 0 ALIGNMENT 347 YS2-4k02.q1k vc_1 215 673 2531 2982 F 459 93.46 1564 reject_low 2 ALIGNMENT 0 YS2-4k02.q1k vc_5 296 216 5026 5025 C 81 0.00 1564 reject_low 14 ALIGNMENT 0 YS2-4k02.q1k vc_7 92 177 13525 13524 F 86 0.00 1564 reject_low 16 ALIGNMENT 0 YS2-4k02.q1k vc_4 214 92 1535 1534 C 123 0.00 1564 reject_low 10 ALIGNMENT 38 YS2-4k02.q1k vc_7 426 375 6360 6411 C 52 92.31 1564|1,0 reject_low 8 ALIGNMENT 0 YS2-4k02.q1k vc_7 216 296 13562 13561 F 81 0.00 1564 reject_low 16 ALIGNMENT 0 YS2-4k02.q1k vc_5 176 92 37 36 C 85 0.00 1564 reject_low 17 ALIGNMENT 38 YS2-4k02.q1k vc_7 178 215 13525 13562 F 38 100.00 1564 reject_low 16 ALIGNMENT 347 YS2-4k02.q1k vc_3 215 673 2531 2982 F 459 93.46 1564 reject_low 4 ALIGNMENT 341 YS2-4k02.q1k vc_4 673 215 5359 5812 C 459 93.03 1564 reject_low 6 ALIGNMENT 40 YS2-4k02.q1k vc_3 215 176 2472 2511 C 40 100.00 1564 reject_low 13 ALIGNMENT 0 YS2-4k02.q1k vc_4 92 214 126 125 F 123 0.00 1564 reject_low 7 ALIGNMENT 0 YS2-4k02.q1k chr10 176 296 426471 426470 F 121 0.00 1564 accept 0 ALIGNMENT 0 YS2-4k02.q1k vc_1 92 214 2531 2530 F 123 0.00 1564 reject_low 2 ALIGNMENT 40 YS2-4k02.q1k vc_2 215 176 2105 2144 C 40 100.00 1564 reject_low 12 ALIGNMENT 0 YS2-4k02.q1k vc_1 296 216 2473 2472 C 81 0.00 1564 reject_low 11 ALIGNMENT 0 YS2-4k02.q1k vc_2 92 214 2164 2163 F 123 0.00 1564 reject_low 3 ALIGNMENT 40 YS2-4k02.q1k vc_4 176 215 5832 5871 F 40 100.00 1564 reject_low 9 ALIGNMENT 0 YS2-4k02.q1k vc_7 214 92 2728 2727 C 123 0.00 1564 reject_low 1 ALIGNMENT 0 YS2-4k02.q1k vc_7 374 92 6412 6411 C 283 0.00 1564 reject_low 8 ALIGNMENT 0 YS2-4k02.q1k vc_3 92 214 2531 2530 F 123 0.00 1564 reject_low 4 ALIGNMENT 0 YS2-4k02.q1k vc_4 216 215 5872 6353 F 0 0.00 1564 reject_low 9 ALIGNMENT 38 YS2-4k02.q1k vc_7 178 215 63 100 F 38 100.00 1564 reject_low 15 ALIGNMENT 347 YS2-4k02.q1k vc_5 215 673 2398 2849 F 459 93.46 1564 reject_low 5 ALIGNMENT 39 YS2-4k02.q1k vc_5 215 177 5025 5063 C 39 100.00 1564 reject_low 14 ALIGNMENT 0 YS2-4k02.q1k vc_2 296 216 2106 2105 C 81 0.00 1564 reject_low 12 ALIGNMENT 36 YS2-4k02.q1k vc_5 212 177 1 36 C 36 100.00 1564 reject_low 17 ALIGNMENT 0 YS2-4k02.q1k vc_3 296 216 2473 2472 C 81 0.00 1564 reject_low 13 ALIGNMENT 0 YS2-4k02.q1k vc_2 175 92 2145 2144 C 84 0.00 1564 reject_low 12 ALIGNMENT 0 YS2-4k02.q1k vc_7 92 177 63 62 F 86 0.00 1564 reject_low 15 ALIGNMENT 0 YS2-4k02.q1k vc_5 296 213 2 1 C 84 0.00 1564 reject_low 17 ALIGNMENT 0 YS2-4k02.q1k vc_5 92 214 2398 2397 F 123 0.00 1564 reject_low 5 ALIGNMENT 154 YS2-4k02.q1k vc_7 673 425 4931 5172 C 249 89.56 1564|0,1 reject_low 8 ALIGNMENT 0 YS2-4k02.q1k vc_4 92 175 5832 5831 F 84 0.00 1564 reject_low 9 ALIGNMENT 0 YS2-4k02.q1k vc_7 425 426 5172 6360 C 0 0.00 1564 reject_low 8 ALIGNMENT 0 YS2-4k02.q1k vc_3 175 92 2512 2511 C 84 0.00 1564 reject_low 13 ALIGNMENT 0 YS2-4k02.q1k vc_7 216 296 100 99 F 81 0.00 1564 reject_low 15 ALIGNMENT 0 YS2-4k02.q1k vc_1 175 92 2512 2511 C 84 0.00 1564 reject_low 11 ALIGNMENT 0 YS2-4k02.q1k vc_5 176 92 5064 5063 C 85 0.00 1564 reject_low 14 ALIGNMENT 156 YS2-4k02.q1k vc_4 215 376 6353 6514 F 162 99.38 1564|1,0 reject_low 9 ALIGNMENT 348 YS2-4k02.q1k vc_7 673 215 2276 2727 C 459 93.46 1564 reject_low 1 ALIGNMENT 0 YS2-4k03.p1k chr15 250 233 668488 668487 C 18 0.00 250 accept 0 ALIGNMENT 187 YS2-4k03.p1k chr15 232 25 668487 668695 C 208 98.56 250 accept 0 ALIGNMENT 64 YS2-4k04.q1k vc_7 192 1 2379 2566 C 192 80.21 936 reject_vc 2 ALIGNMENT 228 YS2-4k04.p1k chrm 312 28 25311 25590 C 285 97.19 330 accept 0 ALIGNMENT 64 YS2-4k04.q1k vc_5 1 192 2559 2746 F 192 80.21 936 reject_vc 1 ALIGNMENT 0 YS2-4k04.p1k chrm 330 313 25312 25311 C 18 0.00 330 accept 0 ALIGNMENT 992 YS2-4k05.p1k chr04 1185 30 175383 176554 C 1156 96.11 1338 accept 0 ALIGNMENT 636 YS2-4k05.q1k chr04 39 919 172807 173683 F 881 92.05 1422 accept 0 ALIGNMENT 450 YS2-4k07.q1k chr09 718 43 184770 185444 C 676 90.53 1403 accept 0 ALIGNMENT 1002 YS2-4k07.p1k chr09 32 1147 180578 181697 F 1116 97.85 1484 accept 0 ALIGNMENT 35 YS2-4k08.q1k vc_7 394 431 13525 13562 F 38 97.37 1521 reject_low 20 ALIGNMENT 0 YS2-4k08.q1k vc_1 122 430 2531 2530 F 309 0.00 1521 reject_low 8 ALIGNMENT 0 YS2-4k08.q1k vc_4 430 122 1535 1534 C 309 0.00 1521 reject_low 15 ALIGNMENT 0 YS2-4k08.q1k vc_2 390 122 2146 2145 C 269 0.00 1521 reject_low 17 ALIGNMENT 0 YS2-4k08.q1k vc_7 430 122 2728 2727 C 309 0.00 1521 reject_low 2 ALIGNMENT 257 YS2-4k08.p1k vc_2 396 4 1471 1875 C 393 90.08 914 reject_low 4 ALIGNMENT 38 YS2-4k08.q1k vc_1 431 391 2472 2512 C 41 97.56 1521 reject_low 16 ALIGNMENT 120 YS2-4k08.q1k vc_4 647 431 5600 5812 C 217 86.64 1521 reject_low 11 ALIGNMENT 0 YS2-4k08.q1k vc_4 432 431 5872 6353 F 0 0.00 1521 reject_low 14 ALIGNMENT 0 YS2-4k08.q1k vc_4 430 122 5813 5812 C 309 0.00 1521 reject_low 11 ALIGNMENT 33 YS2-4k08.q1k vc_5 428 393 1 36 C 36 97.22 1521 reject_low 21 ALIGNMENT 0 YS2-4k08.q1k vc_4 122 390 5831 5830 F 269 0.00 1521 reject_low 14 ALIGNMENT 0 YS2-4k08.q1k vc_2 122 430 2164 2163 F 309 0.00 1521 reject_low 9 ALIGNMENT 252 YS2-4k08.p1k vc_7 4 366 330 703 F 363 91.46 914 reject_low 2 ALIGNMENT 124 YS2-4k08.q1k vc_5 431 657 2398 2620 F 227 86.34 1521 reject_low 1 ALIGNMENT 257 YS2-4k08.p1k vc_5 396 4 4391 4795 C 393 90.08 914 reject_low 1 ALIGNMENT 257 YS2-4k08.p1k vc_6 4 396 3586 3990 F 393 90.08 914 reject_low 6 ALIGNMENT 36 YS2-4k08.q1k vc_5 431 393 5025 5063 C 39 97.44 1521 reject_low 19 ALIGNMENT 124 YS2-4k08.q1k vc_7 657 431 2505 2727 C 227 86.34 1521 reject_low 2 ALIGNMENT 0 YS2-4k08.q1k vc_7 122 393 13525 13524 F 272 0.00 1521 reject_low 20 ALIGNMENT 107 YS2-4k08.p1k vc_4 4 122 6101 6219 F 119 96.64 914 reject_low 12 ALIGNMENT 252 YS2-4k08.p1k vc_7 4 366 13792 14165 F 363 91.46 914 reject_low 7 ALIGNMENT 124 YS2-4k08.q1k vc_2 431 657 2164 2386 F 227 86.34 1521 reject_low 9 ALIGNMENT 0 YS2-4k08.q1k vc_5 392 122 37 36 C 271 0.00 1521 reject_low 21 ALIGNMENT 111 YS2-4k08.q1k vc_4 431 594 126 287 F 164 90.24 1521 reject_low 13 ALIGNMENT 111 YS2-4k08.q1k vc_4 431 594 6353 6514 F 164 90.24 1521|1,0 reject_low 14 ALIGNMENT 78 YS2-4k08.q1k vc_4 515 431 1450 1534 C 85 97.65 1521 reject_low 15 ALIGNMENT 0 YS2-4k08.q1k vc_1 390 122 2513 2512 C 269 0.00 1521 reject_low 16 ALIGNMENT 38 YS2-4k08.q1k vc_3 431 391 2472 2512 C 41 97.56 1521 reject_low 18 ALIGNMENT 0 YS2-4k08.q1k vc_3 122 430 2531 2530 F 309 0.00 1521 reject_low 10 ALIGNMENT 38 YS2-4k08.q1k vc_2 431 391 2105 2145 C 41 97.56 1521 reject_low 17 ALIGNMENT 257 YS2-4k08.p1k vc_1 396 4 1471 1875 C 393 90.08 914 reject_low 3 ALIGNMENT 124 YS2-4k08.q1k vc_3 431 657 2531 2753 F 227 86.34 1521 reject_low 10 ALIGNMENT 280 YS2-4k08.q1k chr14 40 390 191928 192280 F 351 94.59 1521 accept 0 ALIGNMENT 257 YS2-4k08.p1k vc_3 396 4 1471 1875 C 393 90.08 914 reject_low 5 ALIGNMENT 0 YS2-4k08.q1k vc_5 392 122 5064 5063 C 271 0.00 1521 reject_low 19 ALIGNMENT 0 YS2-4k08.q1k vc_4 122 430 126 125 F 309 0.00 1521 reject_low 13 ALIGNMENT 38 YS2-4k08.q1k vc_4 391 431 5831 5871 F 41 97.56 1521 reject_low 14 ALIGNMENT 0 YS2-4k08.q1k vc_5 122 430 2398 2397 F 309 0.00 1521 reject_low 1 ALIGNMENT 124 YS2-4k08.q1k vc_1 431 657 2531 2753 F 227 86.34 1521 reject_low 8 ALIGNMENT 0 YS2-4k08.q1k vc_3 390 122 2513 2512 C 269 0.00 1521 reject_low 18 ALIGNMENT 0 YS2-4k11.q1k chr06 1034 1103 170915 170994 F 70 0.00 1417 reject_bad_break 0 ALIGNMENT 753 YS2-4k11.q1k chr06 50 1033 169918 170914 F 984 93.60 1417 reject_bad_break 0 ALIGNMENT 909 YS2-4k11.p1k chr06 1068 31 171211 172260 C 1038 97.50 1316 reject_bad_break 0 ALIGNMENT 20 YS2-4k11.q1k chr06 1104 1125 170995 171016 F 22 100.00 1417 reject_bad_break 0 ALIGNMENT 944 YS2-4k12.p1k chr15 1127 36 89524 90622 C 1092 96.52 1301 accept 0 ALIGNMENT 637 YS2-4k12.q1k chr15 29 891 85142 85995 F 863 93.28 1528 accept 0 ALIGNMENT 972 YS2-4k13.p1k chr07 32 1241 592511 593742 F 1210 94.05 1352 accept 0 ALIGNMENT 307 YS2-4k13.q1k chr07 516 48 598165 598623 C 469 90.83 1556 accept 0 ALIGNMENT 37 YS2-4k14.q1k vc_3 210 170 2472 2512 C 41 97.56 1497 reject_low 13 ALIGNMENT 86 YS2-4k14.q1k vc_4 296 210 1448 1534 C 87 100.00 1497 reject_low 10 ALIGNMENT 37 YS2-4k14.q1k vc_2 210 170 2105 2145 C 41 97.56 1497 reject_low 12 ALIGNMENT 0 YS2-4k14.q1k vc_4 209 141 5813 5812 C 69 0.00 1497 reject_low 6 ALIGNMENT 0 YS2-4k14.q1k vc_7 421 141 5173 5172 C 281 0.00 1497 reject_low 9 ALIGNMENT 0 YS2-4k14.q1k vc_5 141 209 2398 2397 F 69 0.00 1497 reject_low 4 ALIGNMENT 0 YS2-4k14.q1k vc_7 211 290 13562 13561 F 80 0.00 1497 reject_low 15 ALIGNMENT 0 YS2-4k14.q1k vc_7 141 172 13525 13524 F 32 0.00 1497 reject_low 15 ALIGNMENT 0 YS2-4k14.q1k vc_5 290 208 2 1 C 83 0.00 1497 reject_low 16 ALIGNMENT 0 YS2-4k14.q1k vc_5 290 211 5026 5025 C 80 0.00 1497 reject_low 14 ALIGNMENT 263 YS2-4k14.q1k vc_1 210 575 2531 2890 F 366 92.35 1497 reject_low 1 ALIGNMENT 37 YS2-4k14.q1k vc_4 170 210 5831 5871 F 41 97.56 1497 reject_low 8 ALIGNMENT 35 YS2-4k14.q1k vc_7 173 210 13525 13562 F 38 97.37 1497 reject_low 15 ALIGNMENT 0 YS2-4k14.q1k vc_3 290 211 2473 2472 C 80 0.00 1497 reject_low 13 ALIGNMENT 116 YS2-4k14.q1k chr02 169 30 480946 481088 C 140 95.71 1497 accept 0 ALIGNMENT 36 YS2-4k14.q1k vc_5 210 172 5025 5063 C 39 97.44 1497 reject_low 14 ALIGNMENT 0 YS2-4k14.q1k vc_1 141 209 2531 2530 F 69 0.00 1497 reject_low 1 ALIGNMENT 0 YS2-4k14.q1k vc_4 141 169 5831 5830 F 29 0.00 1497 reject_low 8 ALIGNMENT 256 YS2-4k14.q1k vc_4 575 210 5451 5812 C 366 91.80 1497 reject_low 6 ALIGNMENT 0 YS2-4k14.q1k vc_3 141 209 2531 2530 F 69 0.00 1497 reject_low 3 ALIGNMENT 37 YS2-4k14.q1k vc_1 210 170 2472 2512 C 41 97.56 1497 reject_low 11 ALIGNMENT 0 YS2-4k14.q1k vc_1 169 141 2513 2512 C 29 0.00 1497 reject_low 11 ALIGNMENT 147 YS2-4k14.q1k vc_4 210 371 126 287 F 162 97.53 1497 reject_low 7 ALIGNMENT 263 YS2-4k14.q1k vc_3 210 575 2531 2890 F 366 92.35 1497 reject_low 3 ALIGNMENT 0 YS2-4k14.q1k vc_4 211 210 5872 6353 F 0 0.00 1497 reject_low 8 ALIGNMENT 263 YS2-4k14.q1k vc_2 210 575 2164 2523 F 366 92.35 1497 reject_low 2 ALIGNMENT 263 YS2-4k14.q1k vc_5 210 575 2398 2757 F 366 92.35 1497 reject_low 4 ALIGNMENT 0 YS2-4k14.q1k vc_2 141 209 2164 2163 F 69 0.00 1497 reject_low 2 ALIGNMENT 0 YS2-4k14.q1k vc_1 290 211 2473 2472 C 80 0.00 1497 reject_low 11 ALIGNMENT 263 YS2-4k14.q1k vc_7 575 210 2368 2727 C 366 92.35 1497 reject_low 5 ALIGNMENT 0 YS2-4k14.q1k vc_3 169 141 2513 2512 C 29 0.00 1497 reject_low 13 ALIGNMENT 33 YS2-4k14.q1k vc_5 207 172 1 36 C 36 97.22 1497 reject_low 16 ALIGNMENT 0 YS2-4k14.q1k vc_2 290 211 2106 2105 C 80 0.00 1497 reject_low 12 ALIGNMENT 0 YS2-4k14.q1k vc_4 141 209 126 125 F 69 0.00 1497 reject_low 7 ALIGNMENT 0 YS2-4k14.q1k vc_4 209 141 1535 1534 C 69 0.00 1497 reject_low 10 ALIGNMENT 0 YS2-4k14.q1k vc_5 171 141 5064 5063 C 31 0.00 1497 reject_low 14 ALIGNMENT 0 YS2-4k14.q1k vc_7 209 141 2728 2727 C 69 0.00 1497 reject_low 5 ALIGNMENT 82 YS2-4k14.q1k vc_7 575 422 5023 5172 C 154 87.01 1497 reject_low 9 ALIGNMENT 0 YS2-4k14.q1k vc_5 171 141 37 36 C 31 0.00 1497 reject_low 16 ALIGNMENT 0 YS2-4k14.q1k vc_2 169 141 2146 2145 C 29 0.00 1497 reject_low 12 ALIGNMENT 0 YS2-4k14.q1k chr02 290 170 480947 480946 C 121 0.00 1497 accept 0 ALIGNMENT 147 YS2-4k14.q1k vc_4 210 371 6353 6514 F 162 97.53 1497|1,0 reject_low 8 ALIGNMENT 878 YS2-4k15.p1k chr16 30 1031 159943 160960 F 1002 97.21 1298 accept 0 ALIGNMENT 558 YS2-4k15.q1k chr16 770 48 163467 164186 C 723 93.64 1430 accept 0 ALIGNMENT 785 YS2-4k16.q1k chr12 31 1041 309126 310130 F 1011 93.87 1456 accept 0 ALIGNMENT 910 YS2-4k16.p1k chr12 1173 29 313549 314702 C 1145 94.24 1283 accept 0 ALIGNMENT 0 YS2-4k17.q1k vc_4 465 62 1535 1534 C 404 0.00 1561 reject_low 14 ALIGNMENT 0 YS2-4k17.q1k vc_4 467 466 5872 6353 F 0 0.00 1561 reject_low 13 ALIGNMENT 38 YS2-4k17.q1k vc_3 466 426 2472 2512 C 41 97.56 1561 reject_low 17 ALIGNMENT 97 YS2-4k17.q1k vc_3 466 654 2531 2715 F 189 85.71 1561 reject_low 11 ALIGNMENT 236 YS2-4k17.p1k vc_2 413 1 1324 1749 C 413 87.65 517 reject_low 4 ALIGNMENT 38 YS2-4k17.q1k vc_1 466 426 2472 2512 C 41 97.56 1561 reject_low 15 ALIGNMENT 100 YS2-4k17.q1k vc_4 696 466 5589 5812 C 231 83.98 1561 reject_low 8 ALIGNMENT 35 YS2-4k17.q1k vc_7 429 466 13525 13562 F 38 97.37 1561 reject_low 19 ALIGNMENT 97 YS2-4k17.q1k vc_7 654 466 2543 2727 C 189 85.71 1561 reject_low 2 ALIGNMENT 230 YS2-4k17.p1k vc_7 1 413 456 881 F 413 86.92 517 reject_low 2 ALIGNMENT 0 YS2-4k17.q1k vc_2 62 465 2164 2163 F 404 0.00 1561 reject_low 10 ALIGNMENT 36 YS2-4k17.q1k vc_5 466 428 5025 5063 C 39 97.44 1561 reject_low 18 ALIGNMENT 230 YS2-4k17.p1k vc_7 1 413 13918 14343 F 413 86.92 517 reject_low 6 ALIGNMENT 92 YS2-4k17.q1k vc_4 466 613 126 271 F 148 89.19 1561 reject_low 12 ALIGNMENT 236 YS2-4k17.p1k vc_3 413 1 1324 1749 C 413 87.65 517 reject_low 5 ALIGNMENT 0 YS2-4k17.q1k vc_4 465 62 5813 5812 C 404 0.00 1561 reject_low 8 ALIGNMENT 0 YS2-4k17.q1k vc_1 425 62 2513 2512 C 364 0.00 1561 reject_low 15 ALIGNMENT 0 YS2-4k17.q1k vc_4 62 465 126 125 F 404 0.00 1561 reject_low 12 ALIGNMENT 97 YS2-4k17.q1k vc_5 466 654 2398 2582 F 189 85.71 1561 reject_low 1 ALIGNMENT 97 YS2-4k17.q1k vc_1 466 654 2531 2715 F 189 85.71 1561 reject_low 9 ALIGNMENT 38 YS2-4k17.q1k vc_4 426 466 5831 5871 F 41 97.56 1561 reject_low 13 ALIGNMENT 236 YS2-4k17.p1k vc_1 413 1 1324 1749 C 413 87.65 517 reject_low 3 ALIGNMENT 64 YS2-4k17.q1k vc_4 548 466 1453 1534 C 83 93.98 1561 reject_low 14 ALIGNMENT 33 YS2-4k17.q1k vc_5 463 428 1 36 C 36 97.22 1561 reject_low 20 ALIGNMENT 97 YS2-4k17.q1k vc_2 466 654 2164 2348 F 189 85.71 1561 reject_low 10 ALIGNMENT 0 YS2-4k17.q1k vc_1 62 465 2531 2530 F 404 0.00 1561 reject_low 9 ALIGNMENT 0 YS2-4k17.q1k vc_5 427 62 37 36 C 366 0.00 1561 reject_low 20 ALIGNMENT 0 YS2-4k17.q1k vc_3 425 62 2513 2512 C 364 0.00 1561 reject_low 17 ALIGNMENT 0 YS2-4k17.q1k vc_2 425 62 2146 2145 C 364 0.00 1561 reject_low 16 ALIGNMENT 92 YS2-4k17.q1k vc_4 466 613 6353 6498 F 148 89.19 1561|1,0 reject_low 13 ALIGNMENT 357 YS2-4k17.q1k chr04 425 37 498162 498548 C 389 98.20 1561 accept 0 ALIGNMENT 0 YS2-4k17.q1k vc_3 62 465 2531 2530 F 404 0.00 1561 reject_low 11 ALIGNMENT 0 YS2-4k17.q1k vc_4 62 425 5831 5830 F 364 0.00 1561 reject_low 13 ALIGNMENT 236 YS2-4k17.p1k vc_5 413 1 4244 4669 C 413 87.65 517 reject_low 1 ALIGNMENT 0 YS2-4k17.q1k vc_5 427 62 5064 5063 C 366 0.00 1561 reject_low 18 ALIGNMENT 0 YS2-4k17.q1k vc_7 465 62 2728 2727 C 404 0.00 1561 reject_low 2 ALIGNMENT 233 YS2-4k17.p1k vc_6 1 361 3712 4079 F 361 89.47 517 reject_low 7 ALIGNMENT 38 YS2-4k17.q1k vc_2 466 426 2105 2145 C 41 97.56 1561 reject_low 16 ALIGNMENT 0 YS2-4k17.q1k vc_5 62 465 2398 2397 F 404 0.00 1561 reject_low 1 ALIGNMENT 0 YS2-4k17.q1k vc_7 62 428 13525 13524 F 367 0.00 1561 reject_low 19 ALIGNMENT 35 YS2-4k18.q1k vc_7 373 410 13525 13562 F 38 97.37 1507 reject_low 17 ALIGNMENT 38 YS2-4k18.q1k vc_1 410 370 2472 2512 C 41 97.56 1507 reject_low 14 ALIGNMENT 301 YS2-4k18.p1k vc_2 607 1 1140 1749 C 607 85.34 692 reject_low 4 ALIGNMENT 0 YS2-4k18.q1k vc_7 409 198 2728 2727 C 212 0.00 1507 reject_low 2 ALIGNMENT 0 YS2-4k18.q1k vc_4 411 410 5872 6353 F 0 0.00 1507 reject_low 13 ALIGNMENT 110 YS2-4k18.q1k vc_1 410 632 2531 2748 F 223 84.75 1507 reject_low 8 ALIGNMENT 36 YS2-4k18.q1k vc_5 410 372 5025 5063 C 39 97.44 1507 reject_low 16 ALIGNMENT 0 YS2-4k18.q1k vc_3 369 198 2513 2512 C 172 0.00 1507 reject_low 15 ALIGNMENT 0 YS2-4k18.q1k vc_5 371 198 37 36 C 174 0.00 1507 reject_low 18 ALIGNMENT 0 YS2-4k18.q1k vc_1 198 409 2531 2530 F 212 0.00 1507 reject_low 8 ALIGNMENT 301 YS2-4k18.p1k vc_3 607 1 1140 1749 C 607 85.34 692 reject_low 5 ALIGNMENT 110 YS2-4k18.q1k vc_7 632 410 2510 2727 C 223 84.75 1507 reject_low 2 ALIGNMENT 252 YS2-4k18.q1k chr16 370 46 500952 501271 C 325 94.77 1507 accept 0 ALIGNMENT 38 YS2-4k18.q1k vc_3 410 370 2472 2512 C 41 97.56 1507 reject_low 15 ALIGNMENT 88 YS2-4k18.q1k vc_4 410 560 126 272 F 151 88.08 1507 reject_low 11 ALIGNMENT 108 YS2-4k18.q1k vc_4 627 410 5600 5812 C 218 84.86 1507 reject_low 10 ALIGNMENT 0 YS2-4k18.q1k vc_1 369 198 2513 2512 C 172 0.00 1507 reject_low 14 ALIGNMENT 88 YS2-4k18.q1k vc_4 410 560 6353 6499 F 151 88.08 1507|1,0 reject_low 13 ALIGNMENT 0 YS2-4k18.q1k vc_7 198 372 13525 13524 F 175 0.00 1507 reject_low 17 ALIGNMENT 304 YS2-4k18.p1k vc_5 607 1 4060 4669 C 607 85.50 692 reject_low 1 ALIGNMENT 0 YS2-4k18.q1k vc_3 198 409 2531 2530 F 212 0.00 1507 reject_low 9 ALIGNMENT 33 YS2-4k18.q1k vc_5 407 372 1 36 C 36 97.22 1507 reject_low 18 ALIGNMENT 38 YS2-4k18.q1k vc_4 370 410 5831 5871 F 41 97.56 1507 reject_low 13 ALIGNMENT 0 YS2-4k18.q1k vc_5 198 409 2398 2397 F 212 0.00 1507 reject_low 1 ALIGNMENT 0 YS2-4k18.q1k vc_4 409 198 1535 1534 C 212 0.00 1507 reject_low 12 ALIGNMENT 0 YS2-4k18.q1k vc_4 409 198 5813 5812 C 212 0.00 1507 reject_low 10 ALIGNMENT 299 YS2-4k18.p1k vc_6 1 528 3712 4238 F 528 86.93 692 reject_low 7 ALIGNMENT 0 YS2-4k18.q1k vc_4 198 369 5831 5830 F 172 0.00 1507 reject_low 13 ALIGNMENT 0 YS2-4k18.q1k vc_5 371 198 5064 5063 C 174 0.00 1507 reject_low 16 ALIGNMENT 295 YS2-4k18.p1k vc_7 1 607 456 1065 F 607 84.35 692 reject_low 2 ALIGNMENT 0 YS2-4k18.q1k vc_4 198 409 126 125 F 212 0.00 1507 reject_low 11 ALIGNMENT 110 YS2-4k18.q1k vc_5 410 632 2398 2615 F 223 84.75 1507 reject_low 1 ALIGNMENT 110 YS2-4k18.q1k vc_3 410 632 2531 2748 F 223 84.75 1507 reject_low 9 ALIGNMENT 301 YS2-4k18.p1k vc_1 607 1 1140 1749 C 607 85.34 692 reject_low 3 ALIGNMENT 295 YS2-4k18.p1k vc_7 1 607 13918 14527 F 607 84.35 692 reject_low 6 ALIGNMENT 64 YS2-4k18.q1k vc_4 501 410 1446 1534 C 92 92.39 1507 reject_low 12 ALIGNMENT 1021 YS2-4k19.p1k chr12 29 1208 464793 465983 F 1180 96.36 1329 accept 1 ALIGNMENT 566 YS2-4k19.q1k chr12 756 35 456395 457109 C 722 93.63 1456 accept 0 ALIGNMENT 1021 YS2-4k19.p1k chr12 29 1208 455656 456846 F 1180 96.36 1329 accept 0 ALIGNMENT 566 YS2-4k19.q1k chr12 756 35 465532 466246 C 722 93.63 1456 accept 1 ALIGNMENT 1015 YS2-4k20.p1k chr07 29 1200 585452 586634 F 1172 96.93 1320 accept 0 ALIGNMENT 719 YS2-4k20.q1k chr07 960 35 589122 590046 C 926 93.63 1418 accept 0 ALIGNMENT 39 YS2-4k21.q1k vc_1 462 424 2472 2510 C 39 100.00 1404 reject_low 17 ALIGNMENT 0 YS2-4k21.q1k vc_5 92 461 2398 2397 F 370 0.00 1404 reject_low 1 ALIGNMENT 39 YS2-4k21.q1k vc_4 424 462 5833 5871 F 39 100.00 1404 reject_low 13 ALIGNMENT 0 YS2-4k21.q1k vc_4 461 92 5813 5812 C 370 0.00 1404 reject_low 11 ALIGNMENT 0 YS2-4k21.q1k vc_7 92 424 13525 13524 F 333 0.00 1404 reject_low 20 ALIGNMENT 39 YS2-4k21.q1k vc_3 462 424 2472 2510 C 39 100.00 1404 reject_low 19 ALIGNMENT 245 YS2-4k21.p1k vc_6 1 414 3712 4138 F 414 88.65 474 reject_low 6 ALIGNMENT 113 YS2-4k21.q1k vc_5 462 648 2398 2581 F 187 88.24 1404 reject_low 1 ALIGNMENT 113 YS2-4k21.q1k vc_3 462 648 2531 2714 F 187 88.24 1404 reject_low 10 ALIGNMENT 378 YS2-4k21.q1k chr04 27 421 408839 409235 F 395 99.24 1404 accept 0 ALIGNMENT 0 YS2-4k21.q1k vc_5 421 92 5066 5065 C 330 0.00 1404 reject_low 15 ALIGNMENT 245 YS2-4k21.p1k vc_5 414 1 4243 4669 C 414 88.65 474 reject_low 1 ALIGNMENT 0 YS2-4k21.q1k vc_3 423 92 2511 2510 C 332 0.00 1404 reject_low 19 ALIGNMENT 97 YS2-4k21.q1k vc_4 462 626 126 287 F 165 87.88 1404 reject_low 12 ALIGNMENT 239 YS2-4k21.p1k vc_7 1 414 456 882 F 414 88.16 474 reject_low 2 ALIGNMENT 0 YS2-4k21.q1k vc_2 92 461 2164 2163 F 370 0.00 1404 reject_low 9 ALIGNMENT 0 YS2-4k21.q1k vc_5 421 92 39 38 C 330 0.00 1404 reject_low 16 ALIGNMENT 97 YS2-4k21.q1k vc_4 462 626 6353 6514 F 165 87.88 1404|1,0 reject_low 13 ALIGNMENT 0 YS2-4k21.q1k vc_4 461 92 1535 1534 C 370 0.00 1404 reject_low 14 ALIGNMENT 245 YS2-4k21.p1k vc_1 414 1 1323 1749 C 414 88.65 474 reject_low 3 ALIGNMENT 0 YS2-4k21.q1k vc_1 92 461 2531 2530 F 370 0.00 1404 reject_low 8 ALIGNMENT 239 YS2-4k21.p1k vc_7 1 414 13918 14344 F 414 88.16 474 reject_low 7 ALIGNMENT 113 YS2-4k21.q1k vc_7 648 462 2544 2727 C 187 88.24 1404 reject_low 2 ALIGNMENT 0 YS2-4k21.q1k chr04 422 449 409235 409234 F 28 0.00 1404 accept 0 ALIGNMENT 0 YS2-4k21.q1k vc_7 461 92 2728 2727 C 370 0.00 1404 reject_low 2 ALIGNMENT 39 YS2-4k21.q1k vc_2 462 424 2105 2143 C 39 100.00 1404 reject_low 18 ALIGNMENT 41 YS2-4k21.q1k vc_5 462 422 5025 5065 C 41 100.00 1404 reject_low 15 ALIGNMENT 113 YS2-4k21.q1k vc_4 648 462 5629 5812 C 187 88.24 1404 reject_low 11 ALIGNMENT 113 YS2-4k21.q1k vc_1 462 648 2531 2714 F 187 88.24 1404 reject_low 8 ALIGNMENT 245 YS2-4k21.p1k vc_3 414 1 1323 1749 C 414 88.65 474 reject_low 5 ALIGNMENT 0 YS2-4k21.q1k vc_4 92 461 126 125 F 370 0.00 1404 reject_low 12 ALIGNMENT 62 YS2-4k21.q1k vc_4 547 462 1450 1534 C 86 91.86 1404 reject_low 14 ALIGNMENT 0 YS2-4k21.q1k vc_4 92 423 5833 5832 F 332 0.00 1404 reject_low 13 ALIGNMENT 0 YS2-4k21.q1k vc_2 423 92 2144 2143 C 332 0.00 1404 reject_low 18 ALIGNMENT 0 YS2-4k21.q1k vc_1 423 92 2511 2510 C 332 0.00 1404 reject_low 17 ALIGNMENT 113 YS2-4k21.q1k vc_2 462 648 2164 2347 F 187 88.24 1404 reject_low 9 ALIGNMENT 0 YS2-4k21.q1k vc_4 463 462 5872 6353 F 0 0.00 1404 reject_low 13 ALIGNMENT 38 YS2-4k21.q1k vc_5 459 422 1 38 C 38 100.00 1404 reject_low 16 ALIGNMENT 38 YS2-4k21.q1k vc_7 425 462 13525 13562 F 38 100.00 1404 reject_low 20 ALIGNMENT 245 YS2-4k21.p1k vc_2 414 1 1323 1749 C 414 88.65 474 reject_low 4 ALIGNMENT 0 YS2-4k21.q1k vc_3 92 461 2531 2530 F 370 0.00 1404 reject_low 10 ALIGNMENT 684 YS2-4k22.q1k chr03 39 853 147089 147892 F 815 96.32 1484 accept 0 ALIGNMENT 907 YS2-4k22.p1k chr03 1128 31 151680 152766 C 1098 96.27 1278 accept 0 ALIGNMENT 39 YS2-4k23.q1k vc_4 228 1 5431 5651 C 228 75.88 602 reject_vc 1 ALIGNMENT 492 YS2-4k23.p1k chr12 569 39 780205 780735 C 531 98.87 587 accept 0 ALIGNMENT 0 YS2-4k23.p1k chr12 587 570 780206 780205 C 18 0.00 587 accept 0 ALIGNMENT 38 YS2-4k23.q1k vc_3 1 209 2692 2893 F 209 75.60 602 reject_vc 3 ALIGNMENT 38 YS2-4k23.q1k vc_1 1 209 2692 2893 F 209 75.60 602 reject_vc 2 ALIGNMENT 814 YS2-4k24.q1k chr12 30 1037 982055 983060 F 1008 95.14 1326 accept 0 ALIGNMENT 1021 YS2-4k24.p1k chr12 1227 30 987123 988318 C 1198 95.91 1304 accept 0 ALIGNMENT 205 YS2-4l01.p1k chrm 37 340 69146 69444 F 304 98.03 453 reject_bad_break 0 ALIGNMENT 55 YS2-4l01.p1k chrm 342 436 69486 69580 F 95 98.95 453 reject_bad_break 0 ALIGNMENT 0 YS2-4l01.p1k chrm 341 341 69445 69485 F 1 0.00 453 reject_bad_break 0 ALIGNMENT 0 YS2-4l01.p1k chrm 437 453 69580 69579 F 17 0.00 453 reject_bad_break 0 ALIGNMENT 774 YS2-4l03.q1k chr02 3 957 765637 766584 F 955 94.76 1395 accept 0 ALIGNMENT 979 YS2-4l03.p1k chr02 1256 30 769557 770785 C 1227 94.78 1411 accept 0 ALIGNMENT 999 YS2-4l04.p1k chr12 1192 37 506326 507493 C 1156 96.63 1374 accept 0 ALIGNMENT 627 YS2-4l04.q1k chr12 1 893 503091 503974 F 893 91.38 1366 accept 0 ALIGNMENT 933 YS2-4l06.p1k chr15 30 1060 273852 274889 F 1031 97.28 1294 accept 0 ALIGNMENT 91 YS2-4l06.p1k chr04 964 851 1150821 1150933 C 114 93.86 1294 reject_low 2 ALIGNMENT 89 YS2-4l06.p1k chr12 851 957 784354 784458 F 107 94.39 1294 reject_low 3 ALIGNMENT 783 YS2-4l06.q1k chr15 980 24 279236 280197 C 957 95.30 1430 accept 0 ALIGNMENT 0 YS2-4l06.p1k chr12 62 850 784354 784353 F 789 0.00 1294 reject_low 3 ALIGNMENT 0 YS2-4l06.p1k chr04 850 62 1150934 1150933 C 789 0.00 1294 reject_low 2 ALIGNMENT 104 YS2-4l06.p1k chr06 964 850 191489 191602 C 115 96.52 1294 reject_low 1 ALIGNMENT 0 YS2-4l06.p1k chr06 849 62 191603 191602 C 788 0.00 1294 reject_low 1 ALIGNMENT 702 YS2-4l08.q1k chr08 858 1 129306 130161 C 858 95.45 1281 accept_chi 1 ALIGNMENT 982 YS2-4l08.p1k chr12 29 1104 783004 784085 F 1076 97.49 1628 accept_chi 0 ALIGNMENT 1012 YS2-4l09.p1k chr11 34 1221 372102 373300 F 1188 96.46 1382 accept 0 ALIGNMENT 483 YS2-4l09.q1k chr11 778 32 375794 376537 C 747 90.23 1439 accept 0 ALIGNMENT 502 YS2-4l11.q1k chr12 645 49 86727 87324 C 597 96.15 1519 accept 0 ALIGNMENT 944 YS2-4l11.p1k chr12 34 1082 82824 83881 F 1049 97.14 1343 accept 0 ALIGNMENT 1033 YS2-4l12.p1k chr14 31 1278 774870 776120 F 1248 94.95 1379 reject_low 1 ALIGNMENT 1033 YS2-4l12.p1k chr05 1278 31 19769 21019 C 1248 94.87 1379 accept 0 ALIGNMENT 545 YS2-4l12.q1k chr05 23 712 16524 17209 F 690 94.20 1469 accept 0 ALIGNMENT 597 YS2-4l13.q1k chr12 34 796 437010 437768 F 763 94.89 1478 accept 0 ALIGNMENT 932 YS2-4l13.p1k chr12 1119 37 441259 442353 C 1083 97.14 1319 accept 0 ALIGNMENT 975 YS2-4l14.p1k chr02 29 1105 772717 773806 F 1077 97.77 1382 accept 0 ALIGNMENT 508 YS2-4l14.q1k chr02 694 33 776375 777029 C 662 93.66 1407 accept 0 ALIGNMENT 689 YS2-4l15.q1k chr04 826 31 1007541 1008336 C 796 96.86 1520 accept 0 ALIGNMENT 940 YS2-4l15.p1k chr04 29 1155 1005578 1006720 F 1127 95.39 1390 accept 0 ALIGNMENT 0 YS2-4l16.q1k vc_2 530 62 2146 2145 C 469 0.00 1385 reject_low 12 ALIGNMENT 0 YS2-4l16.q1k vc_4 572 571 5872 6353 F 0 0.00 1385 reject_low 9 ALIGNMENT 111 YS2-4l16.q1k vc_7 824 571 2478 2727 C 254 83.46 1385 reject_low 6 ALIGNMENT 0 YS2-4l16.q1k vc_5 534 62 35 34 C 473 0.00 1385 reject_low 15 ALIGNMENT 32 YS2-4l16.q1k vc_4 531 571 5831 5871 F 41 92.68 1385 reject_low 9 ALIGNMENT 31 YS2-4l16.q1k vc_5 571 535 5025 5061 C 37 94.59 1385 reject_low 14 ALIGNMENT 0 YS2-4l16.q1k vc_2 62 570 2164 2163 F 509 0.00 1385 reject_low 3 ALIGNMENT 0 YS2-4l16.q1k vc_3 62 570 2531 2530 F 509 0.00 1385 reject_low 4 ALIGNMENT 104 YS2-4l16.q1k vc_4 571 723 126 277 F 153 90.20 1385 reject_low 8 ALIGNMENT 32 YS2-4l16.q1k vc_2 571 531 2105 2145 C 41 92.68 1385 reject_low 12 ALIGNMENT 109 YS2-4l16.q1k vc_4 824 571 5561 5812 C 254 83.86 1385 reject_low 7 ALIGNMENT 0 YS2-4l16.p1k chr10 541 524 547170 547169 C 18 0.00 541 accept_chi 0 ALIGNMENT 111 YS2-4l16.q1k vc_2 571 824 2164 2413 F 254 83.46 1385 reject_low 3 ALIGNMENT 0 YS2-4l16.q1k vc_7 570 62 2728 2727 C 509 0.00 1385 reject_low 6 ALIGNMENT 32 YS2-4l16.q1k vc_3 571 531 2472 2512 C 41 92.68 1385 reject_low 13 ALIGNMENT 0 YS2-4l16.q1k vc_5 534 62 5062 5061 C 473 0.00 1385 reject_low 14 ALIGNMENT 111 YS2-4l16.q1k vc_3 571 824 2531 2780 F 254 83.46 1385 reject_low 4 ALIGNMENT 32 YS2-4l16.q1k vc_1 571 531 2472 2512 C 41 92.68 1385 reject_low 11 ALIGNMENT 0 YS2-4l16.q1k vc_1 62 570 2531 2530 F 509 0.00 1385 reject_low 2 ALIGNMENT 0 YS2-4l16.q1k vc_3 530 62 2513 2512 C 469 0.00 1385 reject_low 13 ALIGNMENT 0 YS2-4l16.q1k vc_4 570 62 1535 1534 C 509 0.00 1385 reject_low 10 ALIGNMENT 111 YS2-4l16.q1k vc_5 571 824 2398 2647 F 254 83.46 1385 reject_low 5 ALIGNMENT 481 YS2-4l16.p1k chr10 523 28 547169 547664 C 496 99.60 541 accept_chi 0 ALIGNMENT 111 YS2-4l16.q1k vc_1 571 824 2531 2780 F 254 83.46 1385 reject_low 2 ALIGNMENT 0 YS2-4l16.q1k vc_5 62 570 2398 2397 F 509 0.00 1385 reject_low 5 ALIGNMENT 74 YS2-4l16.q1k vc_4 658 571 1447 1534 C 88 95.45 1385 reject_low 10 ALIGNMENT 28 YS2-4l16.q1k vc_5 568 535 1 34 C 34 94.12 1385 reject_low 15 ALIGNMENT 0 YS2-4l16.q1k vc_4 62 530 5831 5830 F 469 0.00 1385 reject_low 9 ALIGNMENT 458 YS2-4l16.q1k chr10 31 530 547169 547666 F 500 98.00 1385 accept_chi 1 ALIGNMENT 104 YS2-4l16.q1k vc_4 571 723 6353 6504 F 153 90.20 1385|1,0 reject_low 9 ALIGNMENT 0 YS2-4l16.q1k vc_4 62 570 126 125 F 509 0.00 1385 reject_low 8 ALIGNMENT 0 YS2-4l16.q1k vc_4 570 62 5813 5812 C 509 0.00 1385 reject_low 7 ALIGNMENT 0 YS2-4l16.q1k vc_1 530 62 2513 2512 C 469 0.00 1385 reject_low 11 ALIGNMENT 312 YS2-4l17.p1k vc_1 482 1 1265 1749 C 482 89.63 658 reject_vc 0 ALIGNMENT 312 YS2-4l17.p1k vc_2 482 1 1265 1749 C 482 89.63 658 reject_vc 1 ALIGNMENT 312 YS2-4l17.p1k vc_3 482 1 1265 1749 C 482 89.63 658 reject_vc 2 ALIGNMENT 312 YS2-4l17.p1k vc_5 482 1 4185 4669 C 482 89.63 658 reject_vc 3 ALIGNMENT 306 YS2-4l17.p1k vc_7 1 482 456 940 F 482 88.59 658 reject_vc 5 ALIGNMENT 312 YS2-4l17.p1k vc_6 1 482 3712 4196 F 482 89.00 658 reject_vc 4 ALIGNMENT 306 YS2-4l17.p1k vc_7 1 482 13918 14402 F 482 88.59 658 reject_vc 6 ALIGNMENT 376 YS2-4l18.q1k vc_5 591 1 4067 4669 C 591 89.51 883 reject_vc 0 ALIGNMENT 367 YS2-4l18.q1k vc_7 1 591 456 1058 F 591 89.00 883 reject_vc 4 ALIGNMENT 373 YS2-4l18.q1k vc_3 591 1 1147 1749 C 591 89.34 883 reject_vc 3 ALIGNMENT 373 YS2-4l18.q1k vc_1 591 1 1147 1749 C 591 89.34 883 reject_vc 1 ALIGNMENT 367 YS2-4l18.q1k vc_7 1 591 13918 14520 F 591 89.00 883 reject_vc 5 ALIGNMENT 373 YS2-4l18.q1k vc_2 591 1 1147 1749 C 591 89.34 883 reject_vc 2 ALIGNMENT 368 YS2-4l18.q1k vc_6 1 503 3712 4220 F 503 92.45 883 reject_vc 6 ALIGNMENT 0 YS2-4l19.p1k chr04 904 804 877780 877779 C 101 0.00 1333 accept_trans 0 ALIGNMENT 0 YS2-4l19.p1k chr02 62 541 265159 265158 F 480 0.00 1333 reject_low 11 ALIGNMENT 0 YS2-4l19.p1k chr15 62 541 600401 600400 F 480 0.00 1333 reject_low 10 ALIGNMENT 86 YS2-4l19.p1k chr04 854 700 878318 878469 C 155 88.39 1333 reject_low 22 ALIGNMENT 277 YS2-4l19.p1k chr02 544 854 259576 259887 F 311 98.39 1333 reject_low 16 ALIGNMENT 449 YS2-4l19.p1k chr04 803 286 877779 878297 C 518 97.68 1333 accept_trans 0 ALIGNMENT 0 YS2-4l19.p1k chr11 904 873 517098 517097 C 32 0.00 1333 reject_low 7 ALIGNMENT 0 YS2-4l19.p1k chr01 904 873 165830 165829 C 32 0.00 1333 reject_low 21 ALIGNMENT 257 YS2-4l19.p1k chr10 544 857 472377 472697 F 314 96.18 1333 reject_low 19 ALIGNMENT 0 YS2-4l19.p1k chr11 543 62 458115 458114 C 482 0.00 1333 reject_low 1 ALIGNMENT 0 YS2-4l19.p1k chr04 699 62 878470 878469 C 638 0.00 1333 reject_low 22 ALIGNMENT 0 YS2-4l19.p1k chr08 904 855 543631 543630 C 50 0.00 1333 reject_low 12 ALIGNMENT 0 YS2-4l19.p1k chr02 858 904 221356 221355 F 47 0.00 1333 reject_low 18 ALIGNMENT 0 YS2-4l19.p1k chr01 904 873 160242 160241 C 32 0.00 1333 reject_low 20 ALIGNMENT 0 YS2-4l19.p1k chr02 855 904 259887 259886 F 50 0.00 1333 reject_low 16 ALIGNMENT 0 YS2-4l19.p1k chr07 62 543 535215 535214 F 482 0.00 1333 reject_low 8 ALIGNMENT 285 YS2-4l19.p1k chr14 872 544 102194 102523 C 329 97.57 1333 reject_low 6 ALIGNMENT 0 YS2-4l19.p1k chr13 62 543 184170 184169 F 482 0.00 1333 reject_low 17 ALIGNMENT 0 YS2-4l19.p1k chr04 859 904 877758 877757 F 46 0.00 1333 reject_low 24 ALIGNMENT 0 YS2-4l19.p1k chr15 62 660 594630 594629 F 599 0.00 1333 reject_low 23 ALIGNMENT 0 YS2-4l19.p1k chr11 543 62 517427 517426 C 482 0.00 1333 reject_low 7 ALIGNMENT 0 YS2-4l19.p1k chr07 852 904 817387 817386 F 53 0.00 1333 reject_low 25 ALIGNMENT 0 YS2-4l19.p1k chr07 904 855 823001 823000 C 50 0.00 1333 reject_low 14 ALIGNMENT 0 YS2-4l19.p1k chr14 904 873 96613 96612 C 32 0.00 1333 reject_low 3 ALIGNMENT 280 YS2-4l19.p1k chr07 854 544 823000 823311 C 311 98.71 1333 reject_low 14 ALIGNMENT 65 YS2-4l19.p1k chr04 740 858 877642 877758 F 119 87.39 1333 reject_low 24 ALIGNMENT 0 YS2-4l19.p1k chr01 541 62 160578 160577 C 480 0.00 1333 reject_low 20 ALIGNMENT 279 YS2-4l19.p1k chr02 542 854 265159 265472 F 313 98.40 1333 reject_low 11 ALIGNMENT 0 YS2-4l19.p1k chr14 904 873 102195 102194 C 32 0.00 1333 reject_low 6 ALIGNMENT 0 YS2-4l19.p1k chr14 62 542 102548 102547 F 481 0.00 1333 reject_low 26 ALIGNMENT 0 YS2-4l19.p1k chr08 541 62 543944 543943 C 480 0.00 1333 reject_low 12 ALIGNMENT 279 YS2-4l19.p1k chr08 854 542 543630 543943 C 313 98.40 1333 reject_low 12 ALIGNMENT 278 YS2-4l19.p1k chr11 896 544 457763 458114 C 353 95.18 1333 reject_low 1 ALIGNMENT 0 YS2-4l19.p1k chr02 62 543 221040 221039 F 482 0.00 1333 reject_low 18 ALIGNMENT 285 YS2-4l19.p1k chr13 872 536 362588 362926 C 337 97.03 1333 reject_low 2 ALIGNMENT 0 YS2-4l19.p1k chr02 873 904 226953 226952 F 32 0.00 1333 reject_low 4 ALIGNMENT 0 YS2-4l19.p1k chr14 541 62 96944 96943 C 480 0.00 1333 reject_low 3 ALIGNMENT 0 YS2-4l19.p1k chr10 62 543 472377 472376 F 482 0.00 1333 reject_low 19 ALIGNMENT 0 YS2-4l19.p1k chr02 62 541 226622 226621 F 480 0.00 1333 reject_low 4 ALIGNMENT 279 YS2-4l19.p1k chr13 542 854 189750 190063 F 313 98.40 1333 reject_low 13 ALIGNMENT 0 YS2-4l19.p1k chr13 541 62 357338 357337 C 480 0.00 1333 reject_low 5 ALIGNMENT 206 YS2-4l19.p1k chr01 872 544 165829 166163 C 329 89.67 1333 reject_low 21 ALIGNMENT 0 YS2-4l19.p1k chr04 904 855 878319 878318 C 50 0.00 1333 reject_low 22 ALIGNMENT 0 YS2-4l19.p1k chr14 572 904 102576 102575 F 333 0.00 1333 reject_low 26 ALIGNMENT 0 YS2-4l19.p1k chr07 871 904 535542 535541 F 34 0.00 1333 reject_low 8 ALIGNMENT 0 YS2-4l19.p1k chr13 535 62 362927 362926 C 474 0.00 1333 reject_low 2 ALIGNMENT 208 YS2-4l19.p1k chr01 872 542 160241 160577 C 331 89.73 1333 reject_low 20 ALIGNMENT 0 YS2-4l19.p1k chr13 904 873 357007 357006 C 32 0.00 1333 reject_low 5 ALIGNMENT 0 YS2-4l19.p1k chr14 543 62 102524 102523 C 482 0.00 1333 reject_low 6 ALIGNMENT 0 YS2-4l19.p1k chr15 62 543 594821 594820 F 482 0.00 1333 reject_low 15 ALIGNMENT 284 YS2-4l19.p1k chr02 542 872 226622 226953 F 331 97.28 1333 reject_low 4 ALIGNMENT 61 YS2-4l19.p1k chr07 740 851 817278 817387 F 112 87.50 1333 reject_low 25 ALIGNMENT 273 YS2-4l19.p1k chr02 544 857 221040 221356 F 314 97.77 1333 reject_low 18 ALIGNMENT 28 YS2-4l19.p1k chr14 543 571 102548 102576 F 29 100.00 1333 reject_low 26 ALIGNMENT 284 YS2-4l19.p1k chr13 872 542 357006 357337 C 331 97.28 1333 reject_low 5 ALIGNMENT 675 YS2-4l19.q1k chr04 37 956 868221 869117 F 920 93.70 1512 accept_trans 0 ALIGNMENT 282 YS2-4l19.p1k chr11 872 544 517097 517426 C 329 97.26 1333 reject_low 7 ALIGNMENT 0 YS2-4l19.p1k chr04 62 739 877642 877641 F 678 0.00 1333 reject_low 24 ALIGNMENT 0 YS2-4l19.p1k chr07 541 62 817732 817731 C 480 0.00 1333 reject_low 9 ALIGNMENT 0 YS2-4l19.p1k chr13 855 904 184481 184480 F 50 0.00 1333 reject_low 17 ALIGNMENT 0 YS2-4l19.p1k chr04 285 62 878298 878297 C 224 0.00 1333 accept_trans 0 ALIGNMENT 287 YS2-4l19.p1k chr14 872 542 96612 96943 C 331 97.58 1333 reject_low 3 ALIGNMENT 277 YS2-4l19.p1k chr13 544 854 184170 184481 F 311 98.39 1333 reject_low 17 ALIGNMENT 280 YS2-4l19.p1k chr15 544 854 594821 595132 F 311 98.71 1333 reject_low 15 ALIGNMENT 280 YS2-4l19.p1k chr07 544 870 535215 535542 F 327 97.25 1333 reject_low 8 ALIGNMENT 0 YS2-4l19.p1k chr07 62 739 817278 817277 F 678 0.00 1333 reject_low 25 ALIGNMENT 282 YS2-4l19.p1k chr07 854 542 817418 817731 C 313 98.72 1333 reject_low 9 ALIGNMENT 0 YS2-4l19.p1k chr15 791 904 594759 594758 F 114 0.00 1333 reject_low 23 ALIGNMENT 0 YS2-4l19.p1k chr10 858 904 472697 472696 F 47 0.00 1333 reject_low 19 ALIGNMENT 0 YS2-4l19.p1k chr15 855 904 600714 600713 F 50 0.00 1333 reject_low 10 ALIGNMENT 0 YS2-4l19.p1k chr15 855 904 595132 595131 F 50 0.00 1333 reject_low 15 ALIGNMENT 82 YS2-4l19.p1k chr15 661 790 594630 594759 F 130 90.00 1333 reject_low 23 ALIGNMENT 0 YS2-4l19.p1k chr01 543 62 166164 166163 C 482 0.00 1333 reject_low 21 ALIGNMENT 0 YS2-4l19.p1k chr02 62 543 259576 259575 F 482 0.00 1333 reject_low 16 ALIGNMENT 0 YS2-4l19.p1k chr07 543 62 823312 823311 C 482 0.00 1333 reject_low 14 ALIGNMENT 0 YS2-4l19.p1k chr02 855 904 265472 265471 F 50 0.00 1333 reject_low 11 ALIGNMENT 0 YS2-4l19.p1k chr13 855 904 190063 190062 F 50 0.00 1333 reject_low 13 ALIGNMENT 0 YS2-4l19.p1k chr13 62 541 189750 189749 F 480 0.00 1333 reject_low 13 ALIGNMENT 0 YS2-4l19.p1k chr13 904 873 362589 362588 C 32 0.00 1333 reject_low 2 ALIGNMENT 282 YS2-4l19.p1k chr15 542 854 600401 600714 F 313 98.72 1333 reject_low 10 ALIGNMENT 0 YS2-4l19.p1k chr07 904 855 817419 817418 C 50 0.00 1333 reject_low 9 ALIGNMENT 923 YS2-4l20.p1k chr09 29 1100 41463 42552 F 1072 96.36 1283 accept 0 ALIGNMENT 628 YS2-4l20.q1k chr09 868 36 44518 45345 C 833 94.12 1501 accept 0 ALIGNMENT 992 YS2-4l22.p1k chr04 35 1155 728886 730021 F 1121 97.50 1304 accept 0 ALIGNMENT 652 YS2-4l22.q1k chr04 773 40 734275 734999 C 734 97.82 1509 accept 0 ALIGNMENT 232 YS2-4l23.q1k chr14 6 251 134888 135133 F 246 98.78 1324 accept 0 ALIGNMENT 45 YS2-4l23.q1k vc_7 505 454 6360 6411 C 52 96.15 1324|1,0 reject_low 14 ALIGNMENT 0 YS2-4l23.q1k vc_4 62 293 126 125 F 232 0.00 1324 reject_low 12 ALIGNMENT 0 YS2-4l23.q1k vc_1 62 293 2531 2530 F 232 0.00 1324 reject_low 8 ALIGNMENT 0 YS2-4l23.q1k vc_7 62 256 63 62 F 195 0.00 1324 reject_low 20 ALIGNMENT 0 YS2-4l23.q1k vc_4 62 249 5827 5826 F 188 0.00 1324 reject_low 13 ALIGNMENT 374 YS2-4l23.p1k vc_6 1 538 3712 4260 F 538 90.71 582 reject_low 3 ALIGNMENT 103 YS2-4l23.q1k vc_7 734 504 4947 5172 C 231 83.12 1324|0,1 reject_low 14 ALIGNMENT 0 YS2-4l23.q1k vc_7 62 256 13525 13524 F 195 0.00 1324 reject_low 21 ALIGNMENT 0 YS2-4l23.q1k vc_7 504 505 5172 6360 C 0 0.00 1324 reject_low 14 ALIGNMENT 0 YS2-4l23.q1k vc_3 62 293 2531 2530 F 232 0.00 1324 reject_low 10 ALIGNMENT 0 YS2-4l23.q1k vc_5 345 295 5026 5025 C 51 0.00 1324 reject_low 19 ALIGNMENT 39 YS2-4l23.q1k vc_5 294 256 5025 5063 C 39 100.00 1324 reject_low 19 ALIGNMENT 371 YS2-4l23.p1k vc_2 538 1 1201 1749 C 538 90.52 582 reject_low 5 ALIGNMENT 371 YS2-4l23.p1k vc_1 538 1 1201 1749 C 538 90.52 582 reject_low 4 ALIGNMENT 41 YS2-4l23.q1k vc_4 250 294 5827 5871 F 45 97.78 1324 reject_low 13 ALIGNMENT 0 YS2-4l23.q1k vc_7 293 62 2728 2727 C 232 0.00 1324 reject_low 2 ALIGNMENT 0 YS2-4l23.q1k vc_2 345 295 2106 2105 C 51 0.00 1324 reject_low 17 ALIGNMENT 36 YS2-4l23.q1k vc_5 291 256 1 36 C 36 100.00 1324 reject_low 22 ALIGNMENT 0 YS2-4l23.q1k vc_5 255 62 37 36 C 194 0.00 1324 reject_low 22 ALIGNMENT 41 YS2-4l23.q1k vc_1 294 250 2472 2516 C 45 97.78 1324 reject_low 16 ALIGNMENT 0 YS2-4l23.q1k vc_4 295 294 5872 6353 F 0 0.00 1324 reject_low 13 ALIGNMENT 0 YS2-4l23.q1k vc_1 249 62 2517 2516 C 188 0.00 1324 reject_low 16 ALIGNMENT 38 YS2-4l23.q1k vc_7 257 294 63 100 F 38 100.00 1324 reject_low 20 ALIGNMENT 0 YS2-4l23.q1k vc_4 293 62 5813 5812 C 232 0.00 1324 reject_low 11 ALIGNMENT 84 YS2-4l23.q1k vc_4 379 294 1449 1534 C 86 100.00 1324 reject_low 15 ALIGNMENT 147 YS2-4l23.q1k vc_4 294 455 126 287 F 162 97.53 1324 reject_low 12 ALIGNMENT 296 YS2-4l23.q1k vc_5 294 734 2398 2833 F 441 90.02 1324 reject_low 1 ALIGNMENT 41 YS2-4l23.q1k vc_3 294 250 2472 2516 C 45 97.78 1324 reject_low 18 ALIGNMENT 0 YS2-4l23.q1k vc_7 295 345 13562 13561 F 51 0.00 1324 reject_low 21 ALIGNMENT 0 YS2-4l23.q1k vc_7 295 345 100 99 F 51 0.00 1324 reject_low 20 ALIGNMENT 0 YS2-4l23.q1k vc_2 249 62 2150 2149 C 188 0.00 1324 reject_low 17 ALIGNMENT 296 YS2-4l23.q1k vc_2 294 734 2164 2599 F 441 90.02 1324 reject_low 9 ALIGNMENT 0 YS2-4l23.q1k vc_1 345 295 2473 2472 C 51 0.00 1324 reject_low 16 ALIGNMENT 296 YS2-4l23.q1k vc_1 294 734 2531 2966 F 441 90.02 1324 reject_low 8 ALIGNMENT 147 YS2-4l23.q1k vc_4 294 455 6353 6514 F 162 97.53 1324|1,0 reject_low 13 ALIGNMENT 296 YS2-4l23.q1k vc_3 294 734 2531 2966 F 441 90.02 1324 reject_low 10 ALIGNMENT 371 YS2-4l23.p1k vc_3 538 1 1201 1749 C 538 90.52 582 reject_low 6 ALIGNMENT 0 YS2-4l23.q1k vc_5 62 293 2398 2397 F 232 0.00 1324 reject_low 1 ALIGNMENT 41 YS2-4l23.q1k vc_2 294 250 2105 2149 C 45 97.78 1324 reject_low 17 ALIGNMENT 0 YS2-4l23.q1k vc_2 62 293 2164 2163 F 232 0.00 1324 reject_low 9 ALIGNMENT 0 YS2-4l23.q1k vc_4 293 62 1535 1534 C 232 0.00 1324 reject_low 15 ALIGNMENT 374 YS2-4l23.p1k vc_5 538 1 4121 4669 C 538 90.71 582 reject_low 1 ALIGNMENT 38 YS2-4l23.q1k vc_7 257 294 13525 13562 F 38 100.00 1324 reject_low 21 ALIGNMENT 296 YS2-4l23.q1k vc_7 734 294 2292 2727 C 441 90.02 1324 reject_low 2 ALIGNMENT 0 YS2-4l23.q1k vc_5 255 62 5064 5063 C 194 0.00 1324 reject_low 19 ALIGNMENT 365 YS2-4l23.p1k vc_7 1 538 13918 14466 F 538 90.15 582 reject_low 7 ALIGNMENT 0 YS2-4l23.q1k vc_7 453 62 6412 6411 C 392 0.00 1324 reject_low 14 ALIGNMENT 0 YS2-4l23.q1k vc_5 345 292 2 1 C 54 0.00 1324 reject_low 22 ALIGNMENT 365 YS2-4l23.p1k vc_7 1 538 456 1004 F 538 90.15 582 reject_low 2 ALIGNMENT 0 YS2-4l23.q1k vc_3 249 62 2517 2516 C 188 0.00 1324 reject_low 18 ALIGNMENT 0 YS2-4l23.q1k chr14 252 345 135133 135132 F 94 0.00 1324 accept 0 ALIGNMENT 0 YS2-4l23.q1k vc_3 345 295 2473 2472 C 51 0.00 1324 reject_low 18 ALIGNMENT 289 YS2-4l23.q1k vc_4 734 294 5375 5812 C 441 89.57 1324 reject_low 11 ALIGNMENT 779 YS2-4l24.q1k chr14 1032 26 90393 91374 C 1007 94.34 1378 accept 0 ALIGNMENT 910 YS2-4l24.p1k chr14 30 1146 89401 90523 F 1117 94.99 1214 accept 0 ALIGNMENT 989 YS2-4m02.p1k chr04 33 1234 813781 814999 F 1202 95.51 1375 accept 0 ALIGNMENT 570 YS2-4m02.q1k chr04 755 36 814334 815041 C 720 95.56 1424 accept 0 ALIGNMENT 688 YS2-4m03.q1k chr12 50 935 457477 458360 F 886 93.91 1399 accept 0 ALIGNMENT 1010 YS2-4m03.p1k chr12 1147 25 452457 453595 C 1123 97.33 1301 reject_low 1 ALIGNMENT 1010 YS2-4m03.p1k chr12 1147 25 461594 462732 C 1123 97.33 1301 accept 0 ALIGNMENT 688 YS2-4m03.q1k chr12 50 935 466614 467497 F 886 93.91 1399 reject_low 2 ALIGNMENT 954 YS2-4m04.p1k chr10 1091 29 283309 284388 C 1063 97.93 1365 accept 0 ALIGNMENT 534 YS2-4m04.q1k chr10 36 740 280120 280822 F 705 92.77 1375 accept 0 ALIGNMENT 583 YS2-4m05.q1k chr16 860 40 817099 817916 C 821 92.20 1418 accept 0 ALIGNMENT 928 YS2-4m05.p1k chr16 29 1062 814513 815557 F 1034 97.58 1280 accept 0 ALIGNMENT 97 YS2-4m06.q1k chr08 747 482 543680 543940 C 266 81.20 1593 reject_low 9 ALIGNMENT 0 YS2-4m06.q1k chr08 481 107 543941 543940 C 375 0.00 1593 reject_low 9 ALIGNMENT 0 YS2-4m06.q1k chr09 481 107 197485 197484 C 375 0.00 1593 reject_low 21 ALIGNMENT 56 YS2-4m06.q1k chr09 645 482 197323 197484 C 164 79.88 1593 reject_low 21 ALIGNMENT 0 YS2-4m06.q1k chr02 107 481 265162 265161 F 375 0.00 1593 reject_low 8 ALIGNMENT 88 YS2-4m06.q1k chr11 715 482 457884 458113 C 234 81.62 1593 reject_low 15 ALIGNMENT 83 YS2-4m06.q1k chr12 29 127 605374 605472 F 99 94.95 1593 reject_low 2 ALIGNMENT 0 YS2-4m06.q1k chr10 703 646 354563 354618 C 58 0.00 1593 reject_low 22 ALIGNMENT 0 YS2-4m06.q1k chr11 481 107 458114 458113 C 375 0.00 1593 reject_low 15 ALIGNMENT 0 YS2-4m06.q1k chr12 481 107 92380 92379 C 375 0.00 1593 reject_low 18 ALIGNMENT 0 YS2-4m06.q1k chr02 107 481 259577 259576 F 375 0.00 1593 reject_low 4 ALIGNMENT 0 YS2-4m06.q1k chr12 128 411 605472 605471 F 284 0.00 1593 reject_low 2 ALIGNMENT 0 YS2-4m06.q1k chr12 495 107 818389 818388 C 389 0.00 1593 reject_low 16 ALIGNMENT 0 YS2-4m06.q1k chr04 222 107 878298 878297 C 116 0.00 1593 accept_trans 0 ALIGNMENT 0 YS2-4m06.q1k chr07 481 107 823311 823310 C 375 0.00 1593 reject_low 6 ALIGNMENT 0 YS2-4m06.q1k chr07 107 481 401963 401962 F 375 0.00 1593 reject_low 13 ALIGNMENT 0 YS2-4m06.q1k chr04 411 228 884217 884216 C 184 0.00 1593 reject_low 1 ALIGNMENT 0 YS2-4m06.q1k chr07 481 107 817729 817728 C 375 0.00 1593 reject_low 5 ALIGNMENT 0 YS2-4m06.q1k chr13 481 107 378621 378620 C 375 0.00 1593 reject_low 17 ALIGNMENT 97 YS2-4m06.q1k chr13 482 747 189753 190013 F 266 81.20 1593 reject_low 10 ALIGNMENT 94 YS2-4m06.q1k chr07 482 747 931692 931952 F 266 80.83 1593 reject_low 12 ALIGNMENT 0 YS2-4m06.q1k chr02 107 481 221041 221040 F 375 0.00 1593 reject_low 14 ALIGNMENT 75 YS2-4m06.q1k chr12 747 496 818143 818388 C 252 78.97 1593 reject_low 16 ALIGNMENT 0 YS2-4m06.q1k chr13 472 107 362927 362926 C 366 0.00 1593 reject_low 3 ALIGNMENT 95 YS2-4m06.q1k chr07 482 724 401963 402201 F 243 81.89 1593 reject_low 13 ALIGNMENT 0 YS2-4m06.q1k chr05 107 481 138222 138221 F 375 0.00 1593 reject_low 19 ALIGNMENT 97 YS2-4m06.q1k chr14 747 482 96680 96940 C 266 81.20 1593 reject_low 11 ALIGNMENT 305 YS2-4m06.q1k chr04 746 223 877779 878297 C 524 87.79 1593 accept_trans 0 ALIGNMENT 0 YS2-4m06.q1k chr13 107 481 189753 189752 F 375 0.00 1593 reject_low 10 ALIGNMENT 0 YS2-4m06.q1k chr10 503 107 354760 354759 C 397 0.00 1593 reject_low 22 ALIGNMENT 73 YS2-4m06.q1k chr12 747 482 92119 92379 C 266 78.20 1593 reject_low 18 ALIGNMENT 94 YS2-4m06.q1k chr02 482 721 221041 221276 F 240 82.08 1593 reject_low 14 ALIGNMENT 74 YS2-4m06.q1k chr13 747 482 378354 378620 C 266 78.95 1593 reject_low 17 ALIGNMENT 100 YS2-4m06.q1k chr07 747 482 817468 817728 C 266 81.58 1593 reject_low 5 ALIGNMENT 103 YS2-4m06.q1k chr02 482 747 259577 259837 F 266 81.95 1593 reject_low 4 ALIGNMENT 823 YS2-4m06.p1k chr04 34 1010 866854 867835 F 977 95.39 1338 accept_trans 0 ALIGNMENT 0 YS2-4m06.q1k chr02 107 481 226625 226624 F 375 0.00 1593 reject_low 7 ALIGNMENT 98 YS2-4m06.q1k chr13 747 473 362656 362926 C 275 81.09 1593 reject_low 3 ALIGNMENT 66 YS2-4m06.q1k chr05 482 720 138222 138457 F 239 78.24 1593 reject_low 19 ALIGNMENT 97 YS2-4m06.q1k chr02 482 747 265162 265422 F 266 81.20 1593 reject_low 8 ALIGNMENT 0 YS2-4m06.q1k chr14 481 107 96941 96940 C 375 0.00 1593 reject_low 11 ALIGNMENT 100 YS2-4m06.q1k chr07 747 482 823050 823310 C 266 81.58 1593 reject_low 6 ALIGNMENT 62 YS2-4m06.q1k chr13 643 498 463293 463436 C 146 82.88 1593 reject_low 20 ALIGNMENT 0 YS2-4m06.q1k chr13 497 107 463437 463436 C 391 0.00 1593 reject_low 20 ALIGNMENT 56 YS2-4m06.q1k chr10 645 504 354619 354759 C 142 82.39 1593 reject_low 22 ALIGNMENT 163 YS2-4m06.q1k chr04 227 29 884216 884416 C 199 95.48 1593 reject_low 1 ALIGNMENT 21 YS2-4m06.q1k chr10 747 704 354520 354562 C 44 84.09 1593 reject_low 22 ALIGNMENT 97 YS2-4m06.q1k chr02 482 747 226625 226885 F 266 81.20 1593 reject_low 7 ALIGNMENT 0 YS2-4m06.q1k chr07 107 481 931692 931691 F 375 0.00 1593 reject_low 12 ALIGNMENT 200 YS2-4m07.p1k chr03 233 30 270911 271114 C 204 100.00 250 accept 0 ALIGNMENT 0 YS2-4m07.p1k chr03 250 217 270755 270754 C 34 0.00 250 reject_low 1 ALIGNMENT 0 YS2-4m07.p1k chr03 250 234 270912 270911 C 17 0.00 250 accept 0 ALIGNMENT 0 YS2-4m07.p1k chr03 150 62 270820 270819 C 89 0.00 250 reject_low 1 ALIGNMENT 26 YS2-4m07.p1k chr03 216 151 270754 270819 C 66 80.30 250 reject_low 1 ALIGNMENT 20 YS2-4m08.p1k vc_4 361 342 5812 5831 C 20 100.00 1476 reject_low 12 ALIGNMENT 471 YS2-4m08.p1k vc_7 361 1165 100 893 F 805 87.70 1476 reject_low 5 ALIGNMENT 477 YS2-4m08.p1k vc_1 1165 361 1312 2105 C 805 87.95 1476 reject_low 1 ALIGNMENT 471 YS2-4m08.p1k vc_7 361 1165 13562 14355 F 805 87.70 1476 reject_low 6 ALIGNMENT 20 YS2-4m08.p1k vc_7 361 342 2727 2746 C 20 100.00 1476 reject_low 14 ALIGNMENT 20 YS2-4m08.p1k vc_2 342 361 2145 2164 F 20 100.00 1476 reject_low 10 ALIGNMENT 310 YS2-4m08.p1k vc_6 595 1106 3585 4090 F 512 88.09 1476 reject_low 7 ALIGNMENT 477 YS2-4m08.p1k vc_3 1165 361 1312 2105 C 805 87.95 1476 reject_low 3 ALIGNMENT 477 YS2-4m08.p1k vc_5 1165 361 4232 5025 C 805 87.95 1476 reject_low 4 ALIGNMENT 477 YS2-4m08.p1k vc_2 1165 361 1312 2105 C 805 87.95 1476 reject_low 2 ALIGNMENT 20 YS2-4m08.p1k vc_3 342 361 2512 2531 F 20 100.00 1476 reject_low 11 ALIGNMENT 246 YS2-4m08.p1k vc_4 361 712 5871 6217 F 352 91.19 1476 reject_low 8 ALIGNMENT 185 YS2-4m08.p1k chr13 57 340 175626 175903 F 284 90.49 1476 accept 0 ALIGNMENT 20 YS2-4m08.p1k vc_5 342 361 2379 2398 F 20 100.00 1476 reject_low 13 ALIGNMENT 20 YS2-4m08.p1k vc_1 342 361 2512 2531 F 20 100.00 1476 reject_low 9 ALIGNMENT 0 YS2-4m10.p1k chr16 257 275 848494 848493 F 19 0.00 275 ambiguous_trans 24 ALIGNMENT 0 YS2-4m10.p1k chr13 275 257 358841 358840 C 19 0.00 275 ambiguous_trans 13 ALIGNMENT 0 YS2-4m10.p1k chr04 275 257 988558 988557 C 19 0.00 275 ambiguous_trans 3 ALIGNMENT 204 YS2-4m10.p1k chr16 256 30 852467 852693 C 227 98.68 275 ambiguous_trans 20 ALIGNMENT 207 YS2-4m10.p1k chr13 256 30 358840 359066 C 227 99.12 275 ambiguous_trans 13 ALIGNMENT 207 YS2-4m10.p1k chr05 256 30 445234 445460 C 227 99.12 275 ambiguous_trans 4 ALIGNMENT 0 YS2-4m10.p1k chr14 275 257 98447 98446 C 19 0.00 275 ambiguous_trans 19 ALIGNMENT 0 YS2-4m10.p1k chr15 257 275 598898 598897 F 19 0.00 275 ambiguous_trans 2 ALIGNMENT 204 YS2-4m10.p1k chr14 256 30 98446 98672 C 227 98.68 275 ambiguous_trans 19 ALIGNMENT 0 YS2-4m10.p1k chr16 257 275 60534 60533 F 19 0.00 275 ambiguous_trans 16 ALIGNMENT 207 YS2-4m10.p1k chr10 30 256 481818 482044 F 227 99.12 275 ambiguous_trans 9 ALIGNMENT 0 YS2-4m10.p1k chr14 257 275 523225 523224 F 19 0.00 275 ambiguous_trans 14 ALIGNMENT 0 YS2-4m10.p1k chr12 257 275 654907 654906 F 19 0.00 275 ambiguous_trans 11 ALIGNMENT 207 YS2-4m10.p1k chr14 30 256 522999 523225 F 227 99.12 275 ambiguous_trans 14 ALIGNMENT 0 YS2-4m10.p1k chr12 275 257 477817 477816 C 19 0.00 275 ambiguous_trans 10 ALIGNMENT 207 YS2-4m10.p1k chr12 256 30 477816 478042 C 227 99.12 275 ambiguous_trans 10 ALIGNMENT 207 YS2-4m10.p1k chr12 30 256 654681 654907 F 227 99.12 275 ambiguous_trans 11 ALIGNMENT 207 YS2-4m10.p1k chr13 30 256 200188 200414 F 227 99.12 275 ambiguous_trans 12 ALIGNMENT 0 YS2-4m10.p1k chr12 275 257 216924 216923 C 19 0.00 275 ambiguous_trans_ua 17 ALIGNMENT 207 YS2-4m10.p1k chr04 256 30 988557 988783 C 227 99.12 275 ambiguous_trans 3 ALIGNMENT 204 YS2-4m10.p1k chr13 256 30 374538 374764 C 227 98.68 275 ambiguous_trans 18 ALIGNMENT 0 YS2-4m10.p1k chr16 275 257 852468 852467 C 19 0.00 275 ambiguous_trans 20 ALIGNMENT 0 YS2-4m10.p1k chr05 275 257 445235 445234 C 19 0.00 275 ambiguous_trans 4 ALIGNMENT 210 YS2-4m10.p1k chr15 30 256 598672 598898 F 227 99.56 275 ambiguous_trans 2 ALIGNMENT 207 YS2-4m10.p1k chr07 30 256 539621 539847 F 227 99.12 275 ambiguous_trans 6 ALIGNMENT 0 YS2-4m10.p1k chr07 257 275 539847 539846 F 19 0.00 275 ambiguous_trans 6 ALIGNMENT 210 YS2-4m10.p1k chr02 30 256 263430 263656 F 227 99.56 275 ambiguous_trans 1 ALIGNMENT 0 YS2-4m10.p1k chr13 275 257 374539 374538 C 19 0.00 275 ambiguous_trans 18 ALIGNMENT 0 YS2-4m10.p1k chr08 275 257 545447 545446 C 19 0.00 275 ambiguous_trans 7 ALIGNMENT 0 YS2-4m10.p1k chr01 275 257 162081 162080 C 19 0.00 275 ambiguous_trans 21 ALIGNMENT 0 YS2-4m10.p1k chr02 257 275 225119 225118 F 19 0.00 275 ambiguous_trans 0 ALIGNMENT 207 YS2-4m10.p1k chr15 30 256 121559 121785 F 227 99.12 275 ambiguous_trans 15 ALIGNMENT 192 YS2-4m10.p1k chr13 30 256 188021 188247 F 227 96.92 275 ambiguous_trans 23 ALIGNMENT 201 YS2-4m10.p1k chr16 256 30 806479 806705 C 227 98.24 275 ambiguous_trans 22 ALIGNMENT 207 YS2-4m10.p1k chr16 30 256 60308 60534 F 227 99.12 275 ambiguous_trans 16 ALIGNMENT 0 YS2-4m10.p1k chr10 257 275 482044 482043 F 19 0.00 275 ambiguous_trans 9 ALIGNMENT 207 YS2-4m10.p1k chr08 256 30 545446 545672 C 227 99.12 275 ambiguous_trans 7 ALIGNMENT 201 YS2-4m10.p1k chr01 256 30 162080 162306 C 227 98.24 275 ambiguous_trans 21 ALIGNMENT 0 YS2-4m10.p1k chr10 257 275 476460 476459 F 19 0.00 275 ambiguous_trans 8 ALIGNMENT 0 YS2-4m10.p1k chr05 275 257 494334 494333 C 19 0.00 275 ambiguous_trans 5 ALIGNMENT 0 YS2-4m10.p1k chr02 257 275 263656 263655 F 19 0.00 275 ambiguous_trans 1 ALIGNMENT 0 YS2-4m10.p1k chr13 257 275 188247 188246 F 19 0.00 275 ambiguous_trans 23 ALIGNMENT 207 YS2-4m10.p1k chr10 30 256 476234 476460 F 227 99.12 275 ambiguous_trans 8 ALIGNMENT 210 YS2-4m10.p1k chr02 30 256 224893 225119 F 227 99.56 275 ambiguous_trans 0 ALIGNMENT 0 YS2-4m10.p1k chr13 257 275 200414 200413 F 19 0.00 275 ambiguous_trans 12 ALIGNMENT 207 YS2-4m10.p1k chr05 256 30 494333 494559 C 227 99.12 275 ambiguous_trans 5 ALIGNMENT 0 YS2-4m10.p1k chr16 275 257 806480 806479 C 19 0.00 275 ambiguous_trans 22 ALIGNMENT 0 YS2-4m10.p1k chr15 257 275 121785 121784 F 19 0.00 275 ambiguous_trans 15 ALIGNMENT 192 YS2-4m10.p1k chr16 30 256 848268 848494 F 227 96.92 275 ambiguous_trans 24 ALIGNMENT 204 YS2-4m10.p1k chr12 256 30 216923 217149 C 227 98.68 275 ambiguous_trans_ua 17 ALIGNMENT 481 YS2-4m11.q1k chr03 42 616 233991 234561 F 575 95.65 1538 accept 0 ALIGNMENT 0 YS2-4m11.p1k chr03 635 617 233993 233992 C 19 0.00 635 accept 0 ALIGNMENT 563 YS2-4m11.p1k chr03 616 29 233992 234579 C 588 99.49 635 accept 0 ALIGNMENT 107 YS2-4m12.q1k chr12 364 246 472464 472582 C 119 96.64 1506 reject_low 3 ALIGNMENT 0 YS2-4m12.q1k chr12 230 122 489482 489481 C 109 0.00 1506 reject_low 2 ALIGNMENT 0 YS2-4m12.q1k chr12 245 122 485815 485814 C 124 0.00 1506 reject_low 5 ALIGNMENT 0 YS2-4m12.q1k chr12 245 122 472583 472582 C 124 0.00 1506 reject_low 3 ALIGNMENT 0 YS2-4m12.q1k chr12 245 122 468931 468930 C 124 0.00 1506 reject_low 1 ALIGNMENT 401 YS2-4m12.q1k chr12 672 32 459372 460014 C 641 89.08 1506 accept 0 ALIGNMENT 116 YS2-4m12.q1k chr12 364 231 489348 489481 C 134 95.52 1506 reject_low 2 ALIGNMENT 552 YS2-4m12.p1k chr12 35 767 455954 456695 F 733 92.77 1461 accept 0 ALIGNMENT 552 YS2-4m12.p1k chr12 35 767 465091 465832 F 733 92.77 1461 reject_low 1 ALIGNMENT 107 YS2-4m12.q1k chr12 364 246 482044 482162 C 119 96.64 1506 reject_low 4 ALIGNMENT 256 YS2-4m12.q1k chr12 672 246 468509 468930 C 427 87.82 1506 reject_low 1 ALIGNMENT 0 YS2-4m12.q1k chr12 245 122 482163 482162 C 124 0.00 1506 reject_low 4 ALIGNMENT 107 YS2-4m12.q1k chr12 364 246 485696 485814 C 119 96.64 1506 reject_low 5 ALIGNMENT 488 YS2-4m13.p1k chr14 38 637 746287 746877 F 600 95.83 872 accept 0 ALIGNMENT 120 YS2-4m13.q1k chr14 604 270 746551 746877 C 335 81.79 1546 accept 0 ALIGNMENT 0 YS2-4m13.p1k chr14 638 820 746877 746876 F 183 0.00 872 accept 0 ALIGNMENT 0 YS2-4m13.q1k chr14 269 144 746878 746877 C 126 0.00 1546 accept 0 ALIGNMENT 557 YS2-4m14.q1k chr13 704 32 276326 276998 C 673 95.54 1485 accept 0 ALIGNMENT 878 YS2-4m14.p1k chr13 37 1010 271480 272458 F 974 97.74 1251 accept 0 ALIGNMENT 356 YS2-4m15.q1k vc_5 189 645 2404 2856 F 457 93.65 1442 reject_vc 3 ALIGNMENT 158 YS2-4m15.q1k vc_7 645 394 4924 5172 C 252 88.89 1442|0,1 reject_low 7 ALIGNMENT 0 YS2-4m15.q1k vc_2 138 107 2147 2146 C 32 0.00 1442 reject_low 12 ALIGNMENT 0 YS2-4m15.q1k vc_1 107 188 2537 2536 F 82 0.00 1442 reject_vc 0 ALIGNMENT 0 YS2-4m15.q1k vc_4 188 107 5807 5806 C 82 0.00 1442 reject_vc 5 ALIGNMENT 0 YS2-4m15.q1k vc_1 138 107 2514 2513 C 32 0.00 1442 reject_low 11 ALIGNMENT 39 YS2-4m15.q1k vc_3 177 139 2475 2513 C 39 100.00 1442 reject_low 13 ALIGNMENT 0 YS2-4m15.q1k vc_2 107 188 2170 2169 F 82 0.00 1442 reject_vc 1 ALIGNMENT 0 YS2-4m15.q1k vc_5 141 107 5064 5063 C 35 0.00 1442 reject_low 15 ALIGNMENT 0 YS2-4m15.q1k vc_5 107 188 2404 2403 F 82 0.00 1442 reject_vc 3 ALIGNMENT 0 YS2-4m15.q1k vc_4 188 107 1529 1528 C 82 0.00 1442 reject_low 10 ALIGNMENT 39 YS2-4m15.q1k vc_1 177 139 2475 2513 C 39 100.00 1442 reject_low 11 ALIGNMENT 0 YS2-4m15.q1k vc_4 178 188 5869 6358 F 11 0.00 1442 reject_low 9 ALIGNMENT 146 YS2-4m15.q1k vc_4 189 345 132 287 F 157 98.73 1442 reject_low 8 ALIGNMENT 0 YS2-4m15.q1k vc_3 107 188 2537 2536 F 82 0.00 1442 reject_vc 2 ALIGNMENT 0 YS2-4m15.q1k vc_4 346 430 287 286 F 85 0.00 1442 reject_low 8 ALIGNMENT 0 YS2-4m15.q1k vc_1 430 178 2476 2475 C 253 0.00 1442 reject_low 11 ALIGNMENT 39 YS2-4m15.q1k vc_4 139 177 5830 5868 F 39 100.00 1442 reject_low 9 ALIGNMENT 0 YS2-4m15.q1k vc_3 138 107 2514 2513 C 32 0.00 1442 reject_low 13 ALIGNMENT 0 YS2-4m15.q1k vc_5 430 178 2 1 C 253 0.00 1442 reject_low 14 ALIGNMENT 36 YS2-4m15.q1k vc_5 177 142 5028 5063 C 36 100.00 1442 reject_low 15 ALIGNMENT 0 YS2-4m15.q1k vc_4 346 430 6514 6513 F 85 0.00 1442 reject_low 9 ALIGNMENT 77 YS2-4m15.q1k vc_4 272 189 1446 1528 C 84 98.81 1442 reject_low 10 ALIGNMENT 0 YS2-4m15.q1k vc_5 141 107 37 36 C 35 0.00 1442 reject_low 14 ALIGNMENT 0 YS2-4m15.q1k vc_7 188 107 2722 2721 C 82 0.00 1442 reject_vc 4 ALIGNMENT 349 YS2-4m15.q1k vc_4 645 189 5352 5806 C 457 93.22 1442 reject_vc 5 ALIGNMENT 356 YS2-4m15.q1k vc_2 189 645 2170 2622 F 457 93.65 1442 reject_vc 1 ALIGNMENT 0 YS2-4m15.q1k vc_2 430 178 2109 2108 C 253 0.00 1442 reject_low 12 ALIGNMENT 356 YS2-4m15.q1k vc_1 189 645 2537 2989 F 457 93.65 1442 reject_vc 0 ALIGNMENT 0 YS2-4m15.q1k vc_7 107 142 63 62 F 36 0.00 1442 reject_low 16 ALIGNMENT 0 YS2-4m15.q1k vc_7 394 395 5172 6360 C 0 0.00 1442 reject_low 7 ALIGNMENT 146 YS2-4m15.q1k vc_4 189 345 6359 6514 F 157 98.73 1442 reject_low 9 ALIGNMENT 51 YS2-4m15.q1k chr05 49 139 166581 166664 F 91 92.31 1442 reject_low 6 ALIGNMENT 0 YS2-4m15.q1k vc_5 430 178 5029 5028 C 253 0.00 1442 reject_low 15 ALIGNMENT 0 YS2-4m15.q1k vc_4 107 138 5830 5829 F 32 0.00 1442 reject_low 9 ALIGNMENT 356 YS2-4m15.q1k vc_7 645 189 2269 2721 C 457 93.65 1442 reject_vc 4 ALIGNMENT 0 YS2-4m15.q1k vc_4 107 188 132 131 F 82 0.00 1442 reject_low 8 ALIGNMENT 0 YS2-4m15.q1k chr05 140 430 166664 166663 F 291 0.00 1442 reject_low 6 ALIGNMENT 0 YS2-4m15.q1k vc_4 430 273 1447 1446 C 158 0.00 1442 reject_low 10 ALIGNMENT 51 YS2-4m15.q1k vc_7 395 344 6360 6411 C 52 100.00 1442|1,0 reject_low 7 ALIGNMENT 0 YS2-4m15.q1k vc_7 178 430 97 96 F 253 0.00 1442 reject_low 16 ALIGNMENT 0 YS2-4m15.q1k vc_3 430 178 2476 2475 C 253 0.00 1442 reject_low 13 ALIGNMENT 0 YS2-4m15.q1k vc_7 343 107 6412 6411 C 237 0.00 1442 reject_low 7 ALIGNMENT 36 YS2-4m15.q1k vc_5 177 142 1 36 C 36 100.00 1442 reject_low 14 ALIGNMENT 39 YS2-4m15.q1k vc_2 177 139 2108 2146 C 39 100.00 1442 reject_low 12 ALIGNMENT 356 YS2-4m15.q1k vc_3 189 645 2537 2989 F 457 93.65 1442 reject_vc 2 ALIGNMENT 35 YS2-4m15.q1k vc_7 143 177 63 97 F 35 100.00 1442 reject_low 16 ALIGNMENT 0 YS2-4m17.p1k chr11 271 289 484561 484560 F 19 0.00 289 accept 0 ALIGNMENT 227 YS2-4m17.p1k chr11 30 270 484321 484561 F 241 100.00 289 accept 0 ALIGNMENT 0 YS2-4m18.p1k chr11 271 289 484561 484560 F 19 0.00 289 accept 0 ALIGNMENT 227 YS2-4m18.p1k chr11 30 270 484321 484561 F 241 100.00 289 accept 0 ALIGNMENT 402 YS2-4m19.q1k vc_7 710 149 2167 2727 C 562 91.28 1496 reject_vc 1 ALIGNMENT 395 YS2-4m19.q1k vc_4 710 149 5250 5812 C 562 90.93 1496 reject_vc 2 ALIGNMENT 0 YS2-4m19.q1k vc_7 148 77 2728 2727 C 72 0.00 1496 reject_vc 1 ALIGNMENT 0 YS2-4m19.q1k vc_5 393 150 5026 5025 C 244 0.00 1496 reject_low 10 ALIGNMENT 38 YS2-4m19.q1k vc_4 606 546 51 110 C 61 88.52 1496 reject_low 17 ALIGNMENT 0 YS2-4m19.q1k vc_2 393 150 2106 2105 C 244 0.00 1496 reject_low 12 ALIGNMENT 0 YS2-4m19.q1k vc_3 393 150 2473 2472 C 244 0.00 1496 reject_low 13 ALIGNMENT 0 YS2-4m19.q1k vc_5 101 77 46 45 C 25 0.00 1496 reject_low 14 ALIGNMENT 0 YS2-4m19.q1k vc_4 77 148 126 125 F 72 0.00 1496 reject_low 9 ALIGNMENT 0 YS2-4m19.q1k vc_2 107 77 2146 2145 C 31 0.00 1496 reject_low 12 ALIGNMENT 0 YS2-4m19.q1k vc_4 150 149 5872 6353 F 0 0.00 1496 reject_low 8 ALIGNMENT 0 YS2-4m19.q1k vc_4 77 107 5831 5830 F 31 0.00 1496 reject_low 8 ALIGNMENT 0 YS2-4m19.q1k chr02 108 393 253253 253252 F 286 0.00 1496 reject_low 7 ALIGNMENT 0 YS2-4m19.q1k vc_5 77 148 2398 2397 F 72 0.00 1496 reject_vc 0 ALIGNMENT 34 YS2-4m19.q1k vc_5 142 102 4 45 C 41 95.12 1496 reject_low 14 ALIGNMENT 37 YS2-4m19.q1k vc_4 108 149 5831 5871 F 42 97.62 1496 reject_low 8 ALIGNMENT 0 YS2-4m19.q1k vc_7 77 110 13525 13524 F 34 0.00 1496 reject_low 15 ALIGNMENT 0 YS2-4m19.q1k vc_4 311 393 6514 6513 F 83 0.00 1496 reject_low 8 ALIGNMENT 0 YS2-4m19.q1k vc_7 359 360 5172 6360 C 0 0.00 1496 reject_low 6 ALIGNMENT 0 YS2-4m19.q1k vc_7 308 77 6412 6411 C 232 0.00 1496 reject_low 6 ALIGNMENT 402 YS2-4m19.q1k vc_5 149 710 2398 2958 F 562 91.28 1496 reject_vc 0 ALIGNMENT 0 YS2-4m19.q1k vc_4 148 77 5813 5812 C 72 0.00 1496 reject_vc 2 ALIGNMENT 37 YS2-4m19.q1k vc_1 149 108 2472 2512 C 42 97.62 1496 reject_low 11 ALIGNMENT 0 YS2-4m19.q1k vc_4 545 238 111 1445 C 308 0.00 1496 reject_low 17 ALIGNMENT 0 YS2-4m19.q1k vc_5 101 77 5073 5072 C 25 0.00 1496 reject_low 10 ALIGNMENT 37 YS2-4m19.q1k vc_2 149 108 2105 2145 C 42 97.62 1496 reject_low 12 ALIGNMENT 0 YS2-4m19.q1k vc_1 107 77 2513 2512 C 31 0.00 1496 reject_low 11 ALIGNMENT 36 YS2-4m19.q1k vc_5 149 102 5025 5072 C 48 93.75 1496 reject_low 10 ALIGNMENT 175 YS2-4m19.q1k vc_7 606 359 4926 5172 C 248 90.73 1496|0,1 reject_low 6 ALIGNMENT 380 YS2-4m19.q1k vc_2 149 606 2164 2620 F 458 94.76 1496 reject_low 4 ALIGNMENT 0 YS2-4m19.q1k vc_4 148 77 1535 1534 C 72 0.00 1496 reject_low 17 ALIGNMENT 37 YS2-4m19.q1k vc_3 149 108 2472 2512 C 42 97.62 1496 reject_low 13 ALIGNMENT 0 YS2-4m19.q1k vc_3 107 77 2513 2512 C 31 0.00 1496 reject_low 13 ALIGNMENT 0 YS2-4m19.q1k vc_4 311 545 288 1549 F 235 0.00 1496 reject_low 9 ALIGNMENT 0 YS2-4m19.q1k vc_2 77 148 2164 2163 F 72 0.00 1496 reject_low 4 ALIGNMENT 0 YS2-4m19.q1k vc_5 393 143 5 4 C 251 0.00 1496 reject_low 14 ALIGNMENT 35 YS2-4m19.q1k chr02 53 107 253200 253253 F 55 90.91 1496 reject_low 7 ALIGNMENT 34 YS2-4m19.q1k vc_7 111 149 13525 13562 F 39 97.44 1496 reject_low 15 ALIGNMENT 156 YS2-4m19.q1k vc_4 149 310 6353 6514 F 162 99.38 1496|1,0 reject_low 8 ALIGNMENT 380 YS2-4m19.q1k vc_3 149 606 2531 2987 F 458 94.76 1496 reject_low 5 ALIGNMENT 38 YS2-4m19.q1k vc_4 546 606 1550 1609 F 61 88.52 1496 reject_low 9 ALIGNMENT 0 YS2-4m19.q1k vc_3 77 148 2531 2530 F 72 0.00 1496 reject_low 5 ALIGNMENT 38 YS2-4m19.q1k vc_4 606 546 6278 6337 C 61 88.52 1496 reject_low 16 ALIGNMENT 0 YS2-4m19.q1k vc_4 545 77 6338 6337 C 469 0.00 1496 reject_low 16 ALIGNMENT 87 YS2-4m19.q1k vc_4 237 149 1446 1534 C 89 100.00 1496 reject_low 17 ALIGNMENT 156 YS2-4m19.q1k vc_4 149 310 126 287 F 162 99.38 1496 reject_low 9 ALIGNMENT 0 YS2-4m19.q1k vc_7 150 393 13562 13561 F 244 0.00 1496 reject_low 15 ALIGNMENT 48 YS2-4m19.q1k vc_7 360 309 6360 6411 C 52 98.08 1496|1,0 reject_low 6 ALIGNMENT 0 YS2-4m19.q1k vc_1 393 150 2473 2472 C 244 0.00 1496 reject_low 11 ALIGNMENT 0 YS2-4m19.q1k vc_1 77 148 2531 2530 F 72 0.00 1496 reject_low 3 ALIGNMENT 380 YS2-4m19.q1k vc_1 149 606 2531 2987 F 458 94.76 1496 reject_low 3 ALIGNMENT 0 YS2-4m20.q1k chr11 241 92 441772 441771 C 150 0.00 1418 accept 0 ALIGNMENT 0 YS2-4m20.p1k vc_1 894 62 2106 2105 C 833 0.00 1386 reject_low 3 ALIGNMENT 0 YS2-4m20.p1k vc_3 894 62 2473 2472 C 833 0.00 1386 reject_low 11 ALIGNMENT 141 YS2-4m20.p1k vc_1 1224 895 1771 2105 C 330 82.42 1386 reject_low 3 ALIGNMENT 202 YS2-4m20.p1k chr08 664 878 261302 261516 F 215 98.60 1386 reject_low 1 ALIGNMENT 0 YS2-4m20.p1k vc_2 894 62 2106 2105 C 833 0.00 1386 reject_low 4 ALIGNMENT 141 YS2-4m20.p1k vc_4 895 1224 5871 6205 F 330 82.42 1386 reject_low 6 ALIGNMENT 141 YS2-4m20.p1k vc_2 1224 895 1771 2105 C 330 82.42 1386 reject_low 4 ALIGNMENT 198 YS2-4m20.q1k chr08 247 32 261302 261516 C 216 98.15 1418 reject_low 2 ALIGNMENT 28 YS2-4m20.p1k vc_1 928 895 2438 2472 C 34 94.12 1386 reject_low 10 ALIGNMENT 0 YS2-4m20.p1k vc_7 62 894 100 99 F 833 0.00 1386 reject_low 8 ALIGNMENT 621 YS2-4m20.p1k chr11 30 669 441131 441771 F 640 99.84 1386 accept 0 ALIGNMENT 0 YS2-4m20.p1k vc_7 62 894 13562 13561 F 833 0.00 1386 reject_low 9 ALIGNMENT 28 YS2-4m20.p1k vc_3 928 895 2438 2472 C 34 94.12 1386 reject_low 11 ALIGNMENT 141 YS2-4m20.p1k vc_3 1224 895 1771 2105 C 330 82.42 1386 reject_low 5 ALIGNMENT 141 YS2-4m20.p1k vc_5 1224 895 4691 5025 C 330 82.42 1386 reject_low 7 ALIGNMENT 459 YS2-4m20.q1k chr11 855 242 441163 441771 C 614 92.83 1418 accept 0 ALIGNMENT 0 YS2-4m20.q1k chr08 498 248 261303 261302 C 251 0.00 1418 reject_low 2 ALIGNMENT 0 YS2-4m20.p1k vc_3 894 62 2106 2105 C 833 0.00 1386 reject_low 5 ALIGNMENT 0 YS2-4m20.p1k vc_1 894 62 2473 2472 C 833 0.00 1386 reject_low 10 ALIGNMENT 0 YS2-4m20.p1k vc_4 62 894 5871 5870 F 833 0.00 1386 reject_low 6 ALIGNMENT 0 YS2-4m20.p1k chr08 62 663 261302 261301 F 602 0.00 1386 reject_low 1 ALIGNMENT 0 YS2-4m20.p1k vc_5 894 62 5026 5025 C 833 0.00 1386 reject_low 7 ALIGNMENT 0 YS2-4m20.p1k chr11 670 852 441771 441770 F 183 0.00 1386 accept 0 ALIGNMENT 141 YS2-4m20.p1k vc_7 895 1224 13562 13896 F 330 82.42 1386 reject_low 9 ALIGNMENT 141 YS2-4m20.p1k vc_7 895 1224 100 434 F 330 82.42 1386 reject_low 8 ALIGNMENT 979 YS2-4m21.p1k chr11 31 1097 172826 173891 F 1067 97.66 1306 accept 0 ALIGNMENT 623 YS2-4m21.q1k chr11 818 50 175873 176631 C 769 95.45 1498 accept 0 ALIGNMENT 1013 YS2-4m22.p1k chr12 1193 33 916702 917859 C 1161 96.90 1355 accept 0 ALIGNMENT 514 YS2-4m22.q1k chr12 39 722 915018 915701 F 684 92.84 1389 accept 0 ALIGNMENT 1025 YS2-4m23.p1k chr16 34 1200 179761 180927 F 1167 97.09 1270 accept 0 ALIGNMENT 644 YS2-4m23.q1k chr16 850 24 181380 182192 C 827 94.68 1348 accept 0 ALIGNMENT 371 YS2-4n01.q1k vc_5 493 1023 2398 2914 F 531 92.09 1419 reject_low 6 ALIGNMENT 152 YS2-4n01.q1k vc_4 493 655 126 287 F 163 98.77 1419 reject_low 13 ALIGNMENT 0 YS2-4n01.p1k chr12 460 477 452517 452516 F 18 0.00 477 accept 0 ALIGNMENT 0 YS2-4n01.q1k vc_4 492 62 5813 5812 C 431 0.00 1419 reject_low 7 ALIGNMENT 367 YS2-4n01.q1k vc_2 493 938 2164 2603 F 446 95.52 1419 reject_low 9 ALIGNMENT 48 YS2-4n01.q1k vc_7 705 654 6360 6411 C 52 98.08 1419|1,0 reject_low 11 ALIGNMENT 0 YS2-4n01.p1k chr12 460 477 461654 461653 F 18 0.00 477 reject_low 1 ALIGNMENT 0 YS2-4n01.q1k vc_5 62 492 2398 2397 F 431 0.00 1419 reject_low 6 ALIGNMENT 0 YS2-4n01.q1k vc_7 62 455 13525 13524 F 394 0.00 1419 reject_low 19 ALIGNMENT 0 YS2-4n01.q1k vc_7 62 455 63 62 F 394 0.00 1419 reject_low 18 ALIGNMENT 422 YS2-4n01.p1k chr12 33 459 490059 490485 F 427 99.77 477 reject_low 2 ALIGNMENT 0 YS2-4n01.q1k vc_4 656 699 6514 6513 F 44 0.00 1419 reject_low 12 ALIGNMENT 364 YS2-4n01.q1k vc_4 1028 493 5290 5812 C 536 91.60 1419 reject_low 7 ALIGNMENT 152 YS2-4n01.q1k vc_4 493 655 6353 6514 F 163 98.77 1419|1,0 reject_low 12 ALIGNMENT 0 YS2-4n01.q1k vc_4 62 492 126 125 F 431 0.00 1419 reject_low 13 ALIGNMENT 0 YS2-4n01.q1k vc_1 699 494 2473 2472 C 206 0.00 1419 reject_low 14 ALIGNMENT 33 YS2-4n01.q1k vc_4 938 890 68 114 C 49 91.84 1419 reject_low 22 ALIGNMENT 167 YS2-4n01.q1k vc_7 938 704 4943 5172 C 235 92.34 1419|0,1 reject_low 11 ALIGNMENT 0 YS2-4n01.q1k vc_7 494 699 13562 13561 F 206 0.00 1419 reject_low 19 ALIGNMENT 33 YS2-4n01.q1k vc_4 938 890 6295 6341 C 49 91.84 1419 reject_low 21 ALIGNMENT 367 YS2-4n01.q1k vc_3 493 938 2531 2970 F 446 95.52 1419 reject_low 10 ALIGNMENT 33 YS2-4n01.q1k vc_4 890 938 1546 1592 F 49 91.84 1419 reject_low 13 ALIGNMENT 0 YS2-4n01.q1k vc_3 451 62 2514 2513 C 390 0.00 1419 reject_low 16 ALIGNMENT 36 YS2-4n01.q1k vc_5 490 455 1 36 C 36 100.00 1419 reject_low 20 ALIGNMENT 0 YS2-4n01.q1k vc_3 62 492 2531 2530 F 431 0.00 1419 reject_low 10 ALIGNMENT 422 YS2-4n01.q1k chr12 452 26 452091 452517 C 427 99.77 1419 reject_low 3 ALIGNMENT 38 YS2-4n01.q1k vc_7 456 493 13525 13562 F 38 100.00 1419 reject_low 19 ALIGNMENT 0 YS2-4n01.q1k vc_5 699 494 5026 5025 C 206 0.00 1419 reject_low 17 ALIGNMENT 42 YS2-4n01.q1k vc_4 452 493 5830 5871 F 42 100.00 1419 reject_low 12 ALIGNMENT 42 YS2-4n01.q1k vc_1 493 452 2472 2513 C 42 100.00 1419 reject_low 14 ALIGNMENT 425 YS2-4n01.p1k chr12 33 459 461228 461654 F 427 100.00 477 reject_low 1 ALIGNMENT 0 YS2-4n01.q1k vc_2 451 62 2147 2146 C 390 0.00 1419 reject_low 15 ALIGNMENT 0 YS2-4n01.q1k vc_4 492 62 1535 1534 C 431 0.00 1419 reject_low 22 ALIGNMENT 39 YS2-4n01.q1k vc_5 493 455 5025 5063 C 39 100.00 1419 reject_low 17 ALIGNMENT 371 YS2-4n01.q1k vc_7 1028 493 2207 2727 C 536 91.98 1419 reject_low 5 ALIGNMENT 0 YS2-4n01.q1k chr12 699 453 461229 461228 C 247 0.00 1419 accept 0 ALIGNMENT 425 YS2-4n01.p1k chr12 33 459 452091 452517 F 427 100.00 477 accept 0 ALIGNMENT 0 YS2-4n01.q1k vc_5 454 62 37 36 C 393 0.00 1419 reject_low 20 ALIGNMENT 367 YS2-4n01.q1k vc_1 493 938 2531 2970 F 446 95.52 1419 reject_low 8 ALIGNMENT 0 YS2-4n01.q1k chr12 699 453 490060 490059 C 247 0.00 1419 reject_low 4 ALIGNMENT 0 YS2-4n01.q1k vc_7 492 62 2728 2727 C 431 0.00 1419 reject_low 5 ALIGNMENT 0 YS2-4n01.q1k vc_7 494 699 100 99 F 206 0.00 1419 reject_low 18 ALIGNMENT 0 YS2-4n01.q1k vc_3 699 494 2473 2472 C 206 0.00 1419 reject_low 16 ALIGNMENT 0 YS2-4n01.q1k chr12 699 453 452092 452091 C 247 0.00 1419 reject_low 3 ALIGNMENT 0 YS2-4n01.q1k vc_1 451 62 2514 2513 C 390 0.00 1419 reject_low 14 ALIGNMENT 0 YS2-4n01.q1k vc_4 656 889 288 1545 F 234 0.00 1419 reject_low 13 ALIGNMENT 0 YS2-4n01.q1k vc_5 454 62 5064 5063 C 393 0.00 1419 reject_low 17 ALIGNMENT 0 YS2-4n01.q1k vc_1 62 492 2531 2530 F 431 0.00 1419 reject_low 8 ALIGNMENT 419 YS2-4n01.q1k chr12 452 26 490059 490485 C 427 99.53 1419 reject_low 4 ALIGNMENT 0 YS2-4n01.q1k vc_2 62 492 2164 2163 F 431 0.00 1419 reject_low 9 ALIGNMENT 42 YS2-4n01.q1k vc_2 493 452 2105 2146 C 42 100.00 1419 reject_low 15 ALIGNMENT 0 YS2-4n01.q1k vc_4 494 493 5872 6353 F 0 0.00 1419 reject_low 12 ALIGNMENT 84 YS2-4n01.q1k vc_4 581 493 1446 1534 C 89 98.88 1419 reject_low 22 ALIGNMENT 0 YS2-4n01.p1k chr12 460 477 490485 490484 F 18 0.00 477 reject_low 2 ALIGNMENT 0 YS2-4n01.q1k vc_5 699 491 2 1 C 209 0.00 1419 reject_low 20 ALIGNMENT 0 YS2-4n01.q1k vc_4 889 62 6342 6341 C 828 0.00 1419 reject_low 21 ALIGNMENT 0 YS2-4n01.q1k vc_7 653 62 6412 6411 C 592 0.00 1419 reject_low 11 ALIGNMENT 0 YS2-4n01.q1k vc_4 62 451 5830 5829 F 390 0.00 1419 reject_low 12 ALIGNMENT 422 YS2-4n01.q1k chr12 452 26 461228 461654 C 427 99.77 1419 accept 0 ALIGNMENT 0 YS2-4n01.q1k vc_2 699 494 2106 2105 C 206 0.00 1419 reject_low 15 ALIGNMENT 42 YS2-4n01.q1k vc_3 493 452 2472 2513 C 42 100.00 1419 reject_low 16 ALIGNMENT 0 YS2-4n01.q1k vc_4 889 582 115 1445 C 308 0.00 1419 reject_low 22 ALIGNMENT 0 YS2-4n01.q1k vc_7 704 705 5172 6360 C 0 0.00 1419 reject_low 11 ALIGNMENT 38 YS2-4n01.q1k vc_7 456 493 63 100 F 38 100.00 1419 reject_low 18 ALIGNMENT 111 YS2-4n02.p1k chr12 32 153 490421 490543 F 122 97.54 1384 reject_low 2 ALIGNMENT 1056 YS2-4n02.p1k chr12 32 1201 461590 462765 F 1170 97.09 1384 accept 1 ALIGNMENT 465 YS2-4n02.q1k chr12 656 31 453311 453929 C 626 92.33 1428 accept 0 ALIGNMENT 1056 YS2-4n02.p1k chr12 32 1201 452453 453628 F 1170 97.09 1384 accept 0 ALIGNMENT 0 YS2-4n02.p1k chr12 154 886 490543 490542 F 733 0.00 1384 reject_low 2 ALIGNMENT 465 YS2-4n02.q1k chr12 656 31 462448 463066 C 626 92.33 1428 accept 1 ALIGNMENT 930 YS2-4n03.p1k chr13 1107 27 67439 68541 C 1081 96.48 1333 accept 0 ALIGNMENT 641 YS2-4n03.q1k chr13 31 919 63902 64776 F 889 93.48 1463 accept 0 ALIGNMENT 1007 YS2-4n04.p1k chr16 30 1189 535095 536259 F 1160 96.55 1369 accept 0 ALIGNMENT 661 YS2-4n04.q1k chr16 809 32 539961 540730 C 778 96.66 1591 accept 0 ALIGNMENT 610 YS2-4n05.q1k chr10 774 37 495049 495782 C 738 95.12 1507 accept 0 ALIGNMENT 1029 YS2-4n05.p1k chr10 35 1178 490493 491639 F 1144 97.47 1380 accept 0 ALIGNMENT 32 YS2-4n06.p1k chr16 161 79 786294 786376 C 83 79.52 1430 reject_low 1 ALIGNMENT 945 YS2-4n06.p1k chr16 1267 36 785133 786362 C 1232 93.99 1430 accept 0 ALIGNMENT 0 YS2-4n06.p1k chr16 78 62 786377 786376 C 17 0.00 1430 reject_low 1 ALIGNMENT 506 YS2-4n06.q1k chr16 55 715 781991 782645 F 661 93.95 1746 accept 0 ALIGNMENT 0 YS2-4n06.p1k chr16 877 162 786295 786294 C 716 0.00 1430 reject_low 1 ALIGNMENT 907 YS2-4n07.p1k chr12 1082 30 669086 670149 C 1053 97.15 1328 accept 0 ALIGNMENT 623 YS2-4n07.q1k chr12 28 820 666079 666858 F 793 94.83 1582 accept 0 ALIGNMENT 0 YS2-4n08.p1k chr09 512 62 376639 376638 C 451 0.00 1313 reject_low 3 ALIGNMENT 0 YS2-4n08.p1k chr07 524 62 70225 70224 C 463 0.00 1313 reject_low 1 ALIGNMENT 23 YS2-4n08.p1k chr07 540 510 530667 530697 C 31 93.55 1313 reject_low 4 ALIGNMENT 0 YS2-4n08.p1k chr07 843 586 70165 70164 C 258 0.00 1313 reject_low 1 ALIGNMENT 0 YS2-4n08.p1k chr12 843 574 281380 281379 C 270 0.00 1313 reject_low 7 ALIGNMENT 0 YS2-4n08.p1k chr07 843 584 394467 394466 C 260 0.00 1313 reject_low 5 ALIGNMENT 0 YS2-4n08.p1k chr07 548 62 394501 394500 C 487 0.00 1313 reject_low 5 ALIGNMENT 0 YS2-4n08.p1k chr14 560 62 347247 347246 C 499 0.00 1313 reject_low 6 ALIGNMENT 0 YS2-4n08.p1k chr12 549 62 281403 281402 C 488 0.00 1313 reject_low 7 ALIGNMENT 0 YS2-4n08.p1k chr07 843 541 530668 530667 C 303 0.00 1313 reject_low 4 ALIGNMENT 36 YS2-4n08.p1k chr07 585 525 70164 70224 C 61 88.52 1313 reject_low 1 ALIGNMENT 0 YS2-4n08.p1k chr15 843 571 768666 768665 C 273 0.00 1313 reject_low 2 ALIGNMENT 0 YS2-4n08.p1k chr15 530 62 768705 768704 C 469 0.00 1313 reject_low 2 ALIGNMENT 21 YS2-4n08.p1k chr14 585 561 347222 347246 C 25 96.00 1313 reject_low 6 ALIGNMENT 33 YS2-4n08.p1k chr15 570 531 768665 768704 C 40 97.50 1313 reject_low 2 ALIGNMENT 0 YS2-4n08.p1k chr07 509 62 530698 530697 C 448 0.00 1313 reject_low 4 ALIGNMENT 23 YS2-4n08.p1k chr12 573 550 281379 281402 C 24 100.00 1313 reject_low 7 ALIGNMENT 25 YS2-4n08.p1k chr09 540 513 376611 376638 C 28 100.00 1313 reject_low 3 ALIGNMENT 0 YS2-4n08.p1k chr09 843 541 376612 376611 C 303 0.00 1313 reject_low 3 ALIGNMENT 950 YS2-4n08.p1k chr11 29 1181 575647 576800 F 1153 95.14 1313 accept 0 ALIGNMENT 0 YS2-4n08.p1k chr14 843 586 347223 347222 C 258 0.00 1313 reject_low 6 ALIGNMENT 643 YS2-4n08.q1k chr11 825 33 580570 581365 C 793 94.33 1383 accept 0 ALIGNMENT 28 YS2-4n08.p1k chr07 583 549 394466 394500 C 35 94.29 1313 reject_low 5 ALIGNMENT 548 YS2-4n09.p1k chr04 33 607 961846 962422 F 575 99.30 625 accept 0 ALIGNMENT 0 YS2-4n09.p1k chr04 608 625 962422 962421 F 18 0.00 625 accept 0 ALIGNMENT 1001 YS2-4n10.p1k chr15 32 1270 177417 178645 F 1239 95.24 1473 accept 0 ALIGNMENT 1006 YS2-4n12.p1k chr01 1204 38 137456 138631 C 1167 96.74 1393 accept 0 ALIGNMENT 473 YS2-4n12.q1k chr01 31 701 137346 138005 F 671 92.85 1518 accept 0 ALIGNMENT 334 YS2-4n13.p1k chr12 35 986 810741 811692 F 952 78.89 1384 reject_low 1 ALIGNMENT 1015 YS2-4n13.p1k chr07 33 1183 549067 550221 F 1151 96.79 1384 accept 0 ALIGNMENT 542 YS2-4n13.q1k chr07 798 31 552749 553511 C 768 91.67 1468 accept 0 ALIGNMENT 0 YS2-4n15.q1k vc_2 62 394 2164 2163 F 333 0.00 1580 reject_low 4 ALIGNMENT 41 YS2-4n15.q1k vc_2 395 355 2105 2145 C 41 100.00 1580 reject_low 12 ALIGNMENT 229 YS2-4n15.q1k vc_7 718 395 2409 2727 C 324 91.98 1580 reject_low 7 ALIGNMENT 0 YS2-4n15.q1k vc_7 606 607 5174 6361 C 0 0.00 1580 reject_low 17 ALIGNMENT 0 YS2-4n15.q1k vc_5 356 62 37 36 C 295 0.00 1580 reject_low 16 ALIGNMENT 292 YS2-4n15.q1k chr12 37 354 356294 356610 F 318 98.74 1580 accept_chi 1 ALIGNMENT 147 YS2-4n15.q1k vc_4 395 557 126 287 F 163 97.55 1580 reject_low 8 ALIGNMENT 0 YS2-4n15.q1k vc_2 354 62 2146 2145 C 293 0.00 1580 reject_low 12 ALIGNMENT 0 YS2-4n15.q1k vc_7 62 357 13525 13524 F 296 0.00 1580 reject_low 15 ALIGNMENT 0 YS2-4n15.q1k vc_4 394 62 5813 5812 C 333 0.00 1580 reject_low 2 ALIGNMENT 0 YS2-4n15.q1k vc_7 555 62 6412 6411 C 494 0.00 1580 reject_low 17 ALIGNMENT 0 YS2-4n15.q1k vc_4 62 354 5831 5830 F 293 0.00 1580 reject_low 9 ALIGNMENT 36 YS2-4n15.q1k vc_5 392 357 1 36 C 36 100.00 1580 reject_low 16 ALIGNMENT 0 YS2-4n15.q1k vc_5 62 394 2398 2397 F 333 0.00 1580 reject_low 6 ALIGNMENT 229 YS2-4n15.q1k vc_3 395 718 2531 2849 F 324 91.98 1580 reject_low 5 ALIGNMENT 0 YS2-4n15.q1k vc_1 460 396 2473 2472 C 65 0.00 1580 reject_low 11 ALIGNMENT 0 YS2-4n15.q1k vc_7 394 62 2728 2727 C 333 0.00 1580 reject_low 7 ALIGNMENT 50 YS2-4n15.q1k vc_7 718 606 5064 5174 C 113 83.19 1580|0,1 reject_low 17 ALIGNMENT 229 YS2-4n15.q1k vc_1 395 718 2531 2849 F 324 91.98 1580 reject_low 3 ALIGNMENT 0 YS2-4n15.q1k vc_2 460 396 2106 2105 C 65 0.00 1580 reject_low 12 ALIGNMENT 0 YS2-4n15.q1k chr12 355 460 356610 356609 F 106 0.00 1580 accept_chi 1 ALIGNMENT 87 YS2-4n15.q1k vc_4 483 395 1446 1534 C 89 100.00 1580 reject_low 10 ALIGNMENT 0 YS2-4n15.q1k vc_5 460 393 2 1 C 68 0.00 1580 reject_low 16 ALIGNMENT 41 YS2-4n15.q1k vc_1 395 355 2472 2512 C 41 100.00 1580 reject_low 11 ALIGNMENT 36 YS2-4n15.q1k vc_7 607 556 6361 6411 C 52 94.23 1580|1,0 reject_low 17 ALIGNMENT 0 YS2-4n15.q1k vc_3 62 394 2531 2530 F 333 0.00 1580 reject_low 5 ALIGNMENT 41 YS2-4n15.q1k vc_4 355 395 5831 5871 F 41 100.00 1580 reject_low 9 ALIGNMENT 0 YS2-4n15.q1k vc_5 356 62 5064 5063 C 295 0.00 1580 reject_low 14 ALIGNMENT 0 YS2-4n15.q1k vc_5 460 396 5026 5025 C 65 0.00 1580 reject_low 14 ALIGNMENT 0 YS2-4n15.p1k chr12 369 351 356295 356294 C 19 0.00 369 accept_chi 0 ALIGNMENT 0 YS2-4n15.q1k vc_3 460 396 2473 2472 C 65 0.00 1580 reject_low 13 ALIGNMENT 0 YS2-4n15.q1k vc_4 62 394 126 125 F 333 0.00 1580 reject_low 8 ALIGNMENT 0 YS2-4n15.q1k vc_1 62 394 2531 2530 F 333 0.00 1580 reject_low 3 ALIGNMENT 229 YS2-4n15.q1k vc_2 395 718 2164 2482 F 324 91.98 1580 reject_low 4 ALIGNMENT 0 YS2-4n15.q1k vc_4 394 62 1535 1534 C 333 0.00 1580 reject_low 10 ALIGNMENT 230 YS2-4n15.q1k vc_4 718 395 5492 5812 C 324 91.98 1580 reject_low 2 ALIGNMENT 0 YS2-4n15.q1k vc_7 396 460 13562 13561 F 65 0.00 1580 reject_low 15 ALIGNMENT 229 YS2-4n15.q1k vc_5 395 718 2398 2716 F 324 91.98 1580 reject_low 6 ALIGNMENT 0 YS2-4n15.q1k vc_3 354 62 2513 2512 C 293 0.00 1580 reject_low 13 ALIGNMENT 41 YS2-4n15.q1k vc_3 395 355 2472 2512 C 41 100.00 1580 reject_low 13 ALIGNMENT 39 YS2-4n15.q1k vc_5 395 357 5025 5063 C 39 100.00 1580 reject_low 14 ALIGNMENT 0 YS2-4n15.q1k vc_4 396 395 5872 6353 F 0 0.00 1580 reject_low 9 ALIGNMENT 38 YS2-4n15.q1k vc_7 358 395 13525 13562 F 38 100.00 1580 reject_low 15 ALIGNMENT 308 YS2-4n15.p1k chr12 350 34 356294 356610 C 317 100.00 369 accept_chi 0 ALIGNMENT 0 YS2-4n15.q1k vc_1 354 62 2513 2512 C 293 0.00 1580 reject_low 11 ALIGNMENT 147 YS2-4n15.q1k vc_4 395 557 6353 6514 F 163 97.55 1580|1,0 reject_low 9 ALIGNMENT 947 YS2-4n16.p1k chr08 30 1148 253912 255038 F 1119 96.96 1297 accept 0 ALIGNMENT 610 YS2-4n16.q1k chr08 819 36 258399 259171 C 784 94.39 1548 accept 0 ALIGNMENT 1002 YS2-4n17.p1k chr02 30 1143 218113 219235 F 1114 98.11 1335 accept 0 ALIGNMENT 623 YS2-4n20.q1k chr04 31 824 586551 587340 F 794 94.58 1506 accept 0 ALIGNMENT 925 YS2-4n20.p1k chr04 1066 29 588000 589050 C 1038 97.40 1340 accept 0 ALIGNMENT 295 YS2-4n21.p1k chr02 811 330 478550 479042 C 482 87.34 1012 reject_low 1 ALIGNMENT 659 YS2-4n21.q1k chr16 38 845 697726 698532 F 808 95.67 1395 accept 0 ALIGNMENT 0 YS2-4n21.p1k chr02 329 167 479043 479042 C 163 0.00 1012 reject_low 1 ALIGNMENT 488 YS2-4n21.p1k chr16 811 129 701477 702170 C 683 91.07 1012 accept 0 ALIGNMENT 650 YS2-4n22.p1k chr02 33 698 371551 372216 F 666 99.85 699 accept 0 ALIGNMENT 608 YS2-4n22.q1k chr02 699 35 371552 372216 C 665 98.05 1429 accept 0 ALIGNMENT 698 YS2-4n23.q1k chr13 2 970 449441 450402 F 969 92.16 1288 accept 0 ALIGNMENT 949 YS2-4n23.p1k chr13 1156 29 449567 450714 C 1128 95.92 1257 accept 0 ALIGNMENT 20 YS2-4n24.q1k chr14 203 46 784063 784220 C 158 91.14 252 ambiguous_tel 5 ALIGNMENT 0 YS2-4n24.q1k chr03 202 252 325 324 F 51 0.00 252 ambiguous_tel 2 ALIGNMENT 0 YS2-4n24.q1k chr14 252 213 784234 784233 C 40 0.00 252 ambiguous_tel 0 ALIGNMENT 0 YS2-4n24.q1k chr06 124 252 4821 4820 F 129 0.00 252 ambiguous_tel 3 ALIGNMENT 0 YS2-4n24.q1k chr14 252 204 784064 784063 C 49 0.00 252 ambiguous_tel 5 ALIGNMENT 26 YS2-4n24.q1k chr14 212 115 784233 784333 C 98 94.90 252 ambiguous_tel 0 ALIGNMENT 0 YS2-4n24.q1k chr14 252 136 784039 784038 C 117 0.00 252 ambiguous_tel 4 ALIGNMENT 26 YS2-4n24.q1k chr08 211 45 562474 562643 C 167 92.22 252 ambiguous_tel 1 ALIGNMENT 0 YS2-4n24.q1k chr06 205 252 4821 4820 F 48 0.00 252 ambiguous_tel 6 ALIGNMENT 20 YS2-4n24.q1k chr06 68 204 4689 4821 F 137 91.97 252 ambiguous_tel 6 ALIGNMENT 0 YS2-4n24.q1k chr14 114 62 784334 784333 C 53 0.00 252 ambiguous_tel 0 ALIGNMENT 24 YS2-4n24.q1k chr03 40 201 165 325 F 162 91.98 252 ambiguous_tel 2 ALIGNMENT 0 YS2-4n24.q1k chr08 252 212 562475 562474 C 41 0.00 252 ambiguous_tel 1 ALIGNMENT 23 YS2-4n24.q1k chr06 39 123 4735 4821 F 85 95.29 252 ambiguous_tel 3 ALIGNMENT 21 YS2-4n24.q1k chr14 135 41 784038 784135 C 95 93.68 252 ambiguous_tel 4 ALIGNMENT 0 YS2-4o01.p1k chrm 62 77 69826 69825 F 16 0.00 652 accept 0 ALIGNMENT 0 YS2-4o01.p1k chrm 634 652 70381 70380 F 19 0.00 652 accept 0 ALIGNMENT 418 YS2-4o01.p1k chrm 78 633 69826 70381 F 556 100.00 652 accept 0 ALIGNMENT 1022 YS2-4o02.p1k chr04 1223 29 1349768 1350979 C 1195 96.40 1367 accept 0 ALIGNMENT 0 YS2-4o03.p1k chr14 887 277 560694 560693 C 611 0.00 1334 reject_low 18 ALIGNMENT 38 YS2-4o03.p1k chr14 28 82 102469 102523 F 55 92.73 1334 reject_low 7 ALIGNMENT 0 YS2-4o03.p1k chr10 887 285 59092 59091 C 603 0.00 1334 reject_low 11 ALIGNMENT 0 YS2-4o03.p1k chr15 887 83 600404 600403 C 805 0.00 1334 reject_low 9 ALIGNMENT 38 YS2-4o03.p1k chr07 82 28 541352 541406 C 55 92.73 1334 reject_low 4 ALIGNMENT 0 YS2-4o03.p1k chr09 283 887 175107 175106 F 605 0.00 1334 reject_low 16 ALIGNMENT 0 YS2-4o03.p1k chr09 62 202 175028 175027 F 141 0.00 1334 reject_low 16 ALIGNMENT 79 YS2-4o03.p1k chr08 281 203 116096 116174 C 79 100.00 1334 reject_low 14 ALIGNMENT 74 YS2-4o03.p1k chr14 203 276 104805 104878 F 74 100.00 1334 reject_low 19 ALIGNMENT 0 YS2-4o03.p1k chr14 83 202 96942 104804 F 120 0.00 1334 reject_low 19 ALIGNMENT 79 YS2-4o03.p1k chr03 203 281 295480 295558 F 79 100.00 1334 reject_low 13 ALIGNMENT 0 YS2-4o03.p1k chr15 887 282 354035 354034 C 606 0.00 1334 reject_low 2 ALIGNMENT 0 YS2-4o03.p1k chr03 62 202 295480 295479 F 141 0.00 1334 reject_low 13 ALIGNMENT 38 YS2-4o03.p1k chr15 82 28 117702 117756 C 55 92.73 1334 reject_low 8 ALIGNMENT 0 YS2-4o03.p1k chr10 202 62 59173 59172 C 141 0.00 1334 reject_low 11 ALIGNMENT 77 YS2-4o03.p1k chr09 203 282 175028 175107 F 80 98.75 1334 reject_low 16 ALIGNMENT 38 YS2-4o03.p1k chr12 28 82 215364 215418 F 55 92.73 1334 reject_low 5 ALIGNMENT 0 YS2-4o03.p1k chr12 83 887 215418 215417 F 805 0.00 1334 reject_low 5 ALIGNMENT 0 YS2-4o03.p1k chr15 199 62 354116 354115 C 138 0.00 1334 reject_low 2 ALIGNMENT 38 YS2-4o03.p1k chr14 28 82 96887 96941 F 55 92.73 1334 reject_low 19 ALIGNMENT 38 YS2-4o03.p1k chr16 28 82 850908 850962 F 55 92.73 1334 reject_low 10 ALIGNMENT 0 YS2-4o03.p1k chr16 83 887 850962 850961 F 805 0.00 1334 reject_low 10 ALIGNMENT 992 YS2-4o03.p1k chr02 28 1198 266202 267378 F 1171 96.16 1334 accept 0 ALIGNMENT 38 YS2-4o03.p1k chr13 82 28 189752 189806 C 55 92.73 1334 reject_low 6 ALIGNMENT 82 YS2-4o03.p1k chr15 281 200 354034 354115 C 82 100.00 1334 reject_low 2 ALIGNMENT 38 YS2-4o03.p1k chr04 82 28 1095762 1095816 C 55 92.73 1334 reject_low 3 ALIGNMENT 0 YS2-4o03.p1k chr14 83 887 102523 102522 F 805 0.00 1334 reject_low 7 ALIGNMENT 0 YS2-4o03.p1k chr03 282 887 295558 295557 F 606 0.00 1334 reject_low 13 ALIGNMENT 0 YS2-4o03.p1k chr04 887 283 434255 434254 C 605 0.00 1334 reject_low 15 ALIGNMENT 0 YS2-4o03.p1k chr04 202 62 434334 434333 C 141 0.00 1334 reject_low 15 ALIGNMENT 76 YS2-4o03.p1k chr10 284 203 59091 59172 C 82 97.56 1334 reject_low 11 ALIGNMENT 0 YS2-4o03.p1k chr14 202 62 560767 560766 C 141 0.00 1334 reject_low 18 ALIGNMENT 40 YS2-4o03.p1k chr13 83 28 184169 184224 C 56 92.86 1334 reject_low 1 ALIGNMENT 77 YS2-4o03.p1k chr09 203 282 325746 325825 F 80 98.75 1334 reject_low 17 ALIGNMENT 0 YS2-4o03.p1k chr13 887 83 189753 189752 C 805 0.00 1334 reject_low 6 ALIGNMENT 0 YS2-4o03.p1k chr04 887 83 1095763 1095762 C 805 0.00 1334 reject_low 3 ALIGNMENT 0 YS2-4o03.p1k chr14 277 887 104878 104877 F 611 0.00 1334 reject_low 19 ALIGNMENT 0 YS2-4o03.p1k chr07 887 83 541353 541352 C 805 0.00 1334 reject_low 4 ALIGNMENT 80 YS2-4o03.p1k chr15 203 282 113801 113880 F 80 100.00 1334 reject_low 12 ALIGNMENT 0 YS2-4o03.p1k chr15 283 887 113880 113879 F 605 0.00 1334 reject_low 12 ALIGNMENT 0 YS2-4o03.p1k chr15 62 202 113801 113800 F 141 0.00 1334 reject_low 12 ALIGNMENT 0 YS2-4o03.p1k chr13 887 84 184170 184169 C 804 0.00 1334 reject_low 1 ALIGNMENT 74 YS2-4o03.p1k chr14 276 203 560693 560766 C 74 100.00 1334 reject_low 18 ALIGNMENT 77 YS2-4o03.p1k chr04 282 203 434254 434333 C 80 98.75 1334 reject_low 15 ALIGNMENT 0 YS2-4o03.p1k chr08 887 282 116097 116096 C 606 0.00 1334 reject_low 14 ALIGNMENT 0 YS2-4o03.p1k chr08 202 62 116175 116174 C 141 0.00 1334 reject_low 14 ALIGNMENT 0 YS2-4o03.p1k chr09 283 887 325825 325824 F 605 0.00 1334 reject_low 17 ALIGNMENT 38 YS2-4o03.p1k chr15 82 28 600403 600457 C 55 92.73 1334 reject_low 9 ALIGNMENT 0 YS2-4o03.p1k chr09 62 202 325746 325745 F 141 0.00 1334 reject_low 17 ALIGNMENT 0 YS2-4o03.p1k chr15 887 83 117703 117702 C 805 0.00 1334 reject_low 8 ALIGNMENT 588 YS2-4o04.q1k chr02 815 43 70683 71452 C 773 92.50 1427 accept 0 ALIGNMENT 1025 YS2-4o04.p1k chr02 32 1179 67132 68286 F 1148 97.65 1378 accept 0 ALIGNMENT 845 YS2-4o05.p1k chr06 1104 29 199665 200730 C 1076 95.26 1374 accept 0 ALIGNMENT 973 YS2-4o06.p1k chr13 29 1157 474292 475428 F 1129 96.46 1325 accept 0 ALIGNMENT 375 YS2-4o06.q1k chr13 713 34 478463 479133 C 680 86.62 1488 accept 0 ALIGNMENT 980 YS2-4o08.p1k chr10 29 1223 397529 398728 F 1195 95.56 1381 accept 0 ALIGNMENT 591 YS2-4o08.q1k chr10 754 32 401509 402231 C 723 94.33 1468 accept 0 ALIGNMENT 869 YS2-4o09.p1k chr11 1058 33 164603 165667 C 1026 96.00 1281 accept 0 ALIGNMENT 986 YS2-4o10.p1k chr10 1193 30 64557 65728 C 1164 96.13 1359 accept 0 ALIGNMENT 137 YS2-4o13.p1k chr07 34 193 23116 23275 F 160 95.62 207 accept 0 ALIGNMENT 1023 YS2-4o14.p1k chr11 35 1204 643317 644497 F 1170 97.09 1422 accept 0 ALIGNMENT 219 YS2-4o15.q1k vc_3 1 295 2689 2981 F 295 92.20 1096 reject_vc 5 ALIGNMENT 219 YS2-4o15.q1k vc_1 1 295 2689 2981 F 295 92.20 1096 reject_vc 3 ALIGNMENT 219 YS2-4o15.q1k vc_2 1 295 2322 2614 F 295 92.20 1096 reject_vc 4 ALIGNMENT 171 YS2-4o15.q1k vc_7 295 53 4932 5172 C 243 90.95 1096 reject_low 6 ALIGNMENT 222 YS2-4o15.q1k vc_5 1 348 2556 2899 F 348 89.08 1096 reject_vc 0 ALIGNMENT 214 YS2-4o15.q1k vc_4 348 1 5309 5654 C 348 88.51 1096 reject_vc 2 ALIGNMENT 221 YS2-4o15.q1k vc_7 348 1 2226 2569 C 348 89.08 1096 reject_vc 1 ALIGNMENT 756 YS2-4o16.q1k chr04 1022 33 399418 400403 C 990 93.54 1401 accept 0 ALIGNMENT 963 YS2-4o16.p1k chr04 30 1114 395325 396423 F 1085 97.42 1363 accept 0 ALIGNMENT 657 YS2-4o17.p1k chr05 29 727 505845 506543 F 699 98.57 1346 accept 0 ALIGNMENT 479 YS2-4o17.q1k chr05 753 60 510480 511161 C 694 91.35 1429 accept 0 ALIGNMENT 516 YS2-4o18.p1k chr12 568 36 288646 289178 C 533 100.00 586 accept 0 ALIGNMENT 0 YS2-4o18.p1k chr12 586 569 288647 288646 C 18 0.00 586 accept 0 ALIGNMENT 430 YS2-4o19.q1k chr02 47 596 68415 68962 F 550 93.82 1424 accept 0 ALIGNMENT 863 YS2-4o19.p1k chr02 1146 32 71490 72606 C 1115 93.90 1311 accept 0 ALIGNMENT 0 YS2-4o19.p1k chr15 296 704 822985 822984 F 409 0.00 1311 reject_low 2 ALIGNMENT 29 YS2-4o19.p1k chr15 232 295 822922 822985 F 64 96.88 1311 reject_low 2 ALIGNMENT 0 YS2-4o19.p1k chr15 62 231 822922 822921 F 170 0.00 1311 reject_low 2 ALIGNMENT 31 YS2-4o19.p1k chr02 231 294 464031 464094 F 64 98.44 1311 reject_low 1 ALIGNMENT 0 YS2-4o19.p1k chr02 62 230 464031 464030 F 169 0.00 1311 reject_low 1 ALIGNMENT 0 YS2-4o19.p1k chr02 295 704 464094 464093 F 410 0.00 1311 reject_low 1 ALIGNMENT 651 YS2-4o20.p1k chr10 721 27 705043 705735 C 695 98.71 1378 accept 0 ALIGNMENT 523 YS2-4o21.q1k chr12 734 45 791959 792647 C 690 93.48 1398 accept 0 ALIGNMENT 910 YS2-4o21.p1k chr12 28 1144 786029 787151 F 1117 95.08 1277 accept 0 ALIGNMENT 526 YS2-4o22.q1k chr13 797 39 853402 854157 C 759 90.51 1388 accept 0 ALIGNMENT 915 YS2-4o22.p1k chr13 31 1253 849496 850728 F 1223 92.97 1256 accept 0 ALIGNMENT 762 YS2-4o24.p1k chr15 906 39 881735 882605 C 868 96.08 1123 accept 0 ALIGNMENT 605 YS2-4o24.q1k chr15 4 859 877978 878821 F 856 91.59 1220 accept 0 ALIGNMENT 0 YS2-4p02.p1k chr12 705 680 459807 459806 C 26 0.00 705 accept 0 ALIGNMENT 480 YS2-4p02.p1k chr12 679 33 459806 460479 C 647 93.82 705 accept 0 ALIGNMENT 970 YS2-4p03.p1k chr02 28 1127 164826 165929 F 1100 96.82 1298 accept 0 ALIGNMENT 661 YS2-4p03.q1k chr02 917 41 170288 171154 C 877 93.84 1403 accept 0 ALIGNMENT 28 YS2-4p07.q1k chr15 358 328 642279 642309 C 31 96.77 1513 reject_low 1 ALIGNMENT 1047 YS2-4p07.p1k chr15 1201 33 645357 646534 C 1169 97.95 1378 accept 0 ALIGNMENT 490 YS2-4p07.q1k chr15 31 644 641981 642582 F 614 95.60 1513 accept 0 ALIGNMENT 0 YS2-4p07.q1k chr15 327 62 642310 642309 C 266 0.00 1513 reject_low 1 ALIGNMENT 0 YS2-4p07.q1k chr15 439 359 642280 642279 C 81 0.00 1513 reject_low 1 ALIGNMENT 589 YS2-4p08.q1k chr09 877 35 151366 152197 C 843 92.17 1459 accept 0 ALIGNMENT 995 YS2-4p08.p1k chr09 32 1151 150625 151758 F 1120 97.14 1369 accept 0 ALIGNMENT 967 YS2-4p09.p1k chr04 1105 35 245265 246349 C 1071 97.76 1265 accept 0 ALIGNMENT 452 YS2-4p09.q1k chr04 140 725 240513 241093 F 586 93.17 1456 accept 0 ALIGNMENT 960 YS2-4p10.p1k chr08 30 1222 32047 33239 F 1193 95.31 1406 accept 0 ALIGNMENT 0 YS2-4p11.p1k chr14 246 228 9227 9226 C 19 0.00 246 ambiguous_tel 12 ALIGNMENT 168 YS2-4p11.q1k vc_2 1 299 2322 2615 F 299 86.96 953 reject_vc 5 ALIGNMENT 128 YS2-4p11.p1k chr14 227 59 9226 9394 C 169 92.90 246 ambiguous_tel 12 ALIGNMENT 129 YS2-4p11.p1k chr10 58 227 742849 743018 F 170 92.94 246 ambiguous_tel 9 ALIGNMENT 126 YS2-4p11.p1k chr02 58 227 810414 810583 F 170 92.35 246 ambiguous_tel 13 ALIGNMENT 0 YS2-4p11.p1k chr07 228 246 1081839 1081838 F 19 0.00 246 ambiguous_tel 11 ALIGNMENT 0 YS2-4p11.p1k chr04 246 228 2699 2698 C 19 0.00 246 ambiguous_tel 8 ALIGNMENT 128 YS2-4p11.p1k chr07 59 227 1081671 1081839 F 169 92.90 246 ambiguous_tel 11 ALIGNMENT 0 YS2-4p11.p1k chr06 246 228 7317 7316 C 19 0.00 246 ambiguous_tel 10 ALIGNMENT 0 YS2-4p11.p1k chr13 246 228 8135 8134 C 19 0.00 246 ambiguous_tel 14 ALIGNMENT 0 YS2-4p11.p1k chr08 246 228 7297 7296 C 19 0.00 246 ambiguous_tel 16 ALIGNMENT 163 YS2-4p11.q1k vc_4 385 1 5272 5654 C 385 83.64 953 reject_vc 3 ALIGNMENT 48 YS2-4p11.q1k vc_7 54 3 6360 6411 C 52 98.08 953|1,0 reject_vc 7 ALIGNMENT 170 YS2-4p11.q1k vc_5 1 385 2556 2936 F 385 84.16 953 reject_vc 0 ALIGNMENT 189 YS2-4p11.p1k chr11 227 34 15459 15652 C 194 100.00 246 ambiguous_tel 2 ALIGNMENT 105 YS2-4p11.p1k chr09 58 227 437111 437280 F 170 88.24 246 ambiguous_tel 15 ALIGNMENT 0 YS2-4p11.q1k vc_7 53 54 5172 6360 C 0 0.00 953 reject_vc 7 ALIGNMENT 0 YS2-4p11.p1k chr02 228 246 810583 810582 F 19 0.00 246 ambiguous_tel 13 ALIGNMENT 129 YS2-4p11.p1k chr04 227 58 2698 2867 C 170 92.94 246 ambiguous_tel 8 ALIGNMENT 170 YS2-4p11.q1k vc_7 385 1 2189 2569 C 385 84.16 953 reject_vc 1 ALIGNMENT 128 YS2-4p11.p1k chr06 227 59 7316 7484 C 169 92.90 246 ambiguous_tel 10 ALIGNMENT 126 YS2-4p11.p1k chr13 227 58 8134 8303 C 170 92.35 246 ambiguous_tel 14 ALIGNMENT 0 YS2-4p11.p1k chr09 228 246 437280 437279 F 19 0.00 246 ambiguous_tel 15 ALIGNMENT 168 YS2-4p11.q1k vc_1 1 299 2689 2982 F 299 86.96 953 reject_vc 4 ALIGNMENT 102 YS2-4p11.p1k chr08 227 58 7296 7465 C 170 87.65 246 ambiguous_tel 16 ALIGNMENT 119 YS2-4p11.q1k vc_7 299 53 4931 5172 C 247 84.62 953|0,1 reject_vc 7 ALIGNMENT 0 YS2-4p11.p1k chr10 228 246 743018 743017 F 19 0.00 246 ambiguous_tel 9 ALIGNMENT 0 YS2-4p11.p1k chr11 246 228 15460 15459 C 19 0.00 246 ambiguous_tel 2 ALIGNMENT 168 YS2-4p11.q1k vc_3 1 299 2689 2982 F 299 86.96 953 reject_vc 6 ALIGNMENT 624 YS2-4p12.q1k chr12 790 36 466810 467559 C 755 95.36 1413 accept 1 ALIGNMENT 1040 YS2-4p12.p1k chr12 29 1141 453617 454736 F 1113 98.29 1373 accept 0 ALIGNMENT 1040 YS2-4p12.p1k chr12 29 1141 462754 463873 F 1113 98.29 1373 accept 1 ALIGNMENT 624 YS2-4p12.q1k chr12 790 36 457673 458422 C 755 95.36 1413 accept 0 ALIGNMENT 1010 YS2-4p13.p1k chr14 1137 36 408800 409908 C 1102 98.00 1392 accept 0 ALIGNMENT 485 YS2-4p13.q1k chr14 32 764 404503 405235 F 733 91.00 1383 accept 0 ALIGNMENT 676 YS2-4p14.p1k chr04 30 890 415939 416799 F 861 93.73 1459 accept 0 ALIGNMENT 560 YS2-4p15.q1k chr05 81 839 349980 350720 F 759 93.02 1507 accept 0 ALIGNMENT 1078 YS2-4p15.p1k chr05 1254 33 350076 351300 C 1222 96.73 1427 accept 0 ALIGNMENT 36 YS2-4p16.q1k vc_5 284 249 1 36 C 36 100.00 1450 reject_low 15 ALIGNMENT 0 YS2-4p16.q1k vc_2 369 288 2106 2105 C 82 0.00 1450 reject_low 11 ALIGNMENT 219 YS2-4p16.q1k vc_2 287 668 2164 2542 F 382 86.91 1450 reject_low 2 ALIGNMENT 39 YS2-4p16.q1k vc_5 287 249 5025 5063 C 39 100.00 1450 reject_low 13 ALIGNMENT 0 YS2-4p16.q1k vc_5 248 62 5064 5063 C 187 0.00 1450 reject_low 13 ALIGNMENT 41 YS2-4p16.q1k vc_4 247 287 5831 5871 F 41 100.00 1450 reject_low 8 ALIGNMENT 0 YS2-4p16.q1k vc_3 62 286 2531 2530 F 225 0.00 1450 reject_low 3 ALIGNMENT 0 YS2-4p16.q1k vc_7 286 62 2728 2727 C 225 0.00 1450 reject_low 5 ALIGNMENT 219 YS2-4p16.q1k vc_7 668 287 2349 2727 C 382 86.91 1450 reject_low 5 ALIGNMENT 41 YS2-4p16.q1k vc_1 287 247 2472 2512 C 41 100.00 1450 reject_low 10 ALIGNMENT 0 YS2-4p16.q1k vc_3 369 288 2473 2472 C 82 0.00 1450 reject_low 12 ALIGNMENT 137 YS2-4p16.q1k vc_4 287 449 6353 6514 F 163 95.71 1450|1,0 reject_low 8 ALIGNMENT 137 YS2-4p16.q1k vc_4 287 449 126 287 F 163 95.71 1450 reject_low 7 ALIGNMENT 219 YS2-4p16.q1k vc_1 287 668 2531 2909 F 382 86.91 1450 reject_low 1 ALIGNMENT 0 YS2-4p16.q1k vc_5 248 62 37 36 C 187 0.00 1450 reject_low 15 ALIGNMENT 0 YS2-4p16.q1k vc_4 286 62 1535 1534 C 225 0.00 1450 reject_low 9 ALIGNMENT 0 YS2-4p16.q1k vc_7 288 369 13562 13561 F 82 0.00 1450 reject_low 14 ALIGNMENT 219 YS2-4p16.q1k vc_3 287 668 2531 2909 F 382 86.91 1450 reject_low 3 ALIGNMENT 0 YS2-4p16.q1k vc_5 369 285 2 1 C 85 0.00 1450 reject_low 15 ALIGNMENT 0 YS2-4p16.q1k vc_4 62 246 5831 5830 F 185 0.00 1450 reject_low 8 ALIGNMENT 0 YS2-4p16.q1k chr03 247 369 162447 162446 F 123 0.00 1450 accept 0 ALIGNMENT 214 YS2-4p16.q1k vc_4 668 287 5432 5812 C 382 86.65 1450 reject_low 6 ALIGNMENT 0 YS2-4p16.q1k vc_1 369 288 2473 2472 C 82 0.00 1450 reject_low 10 ALIGNMENT 0 YS2-4p16.q1k vc_4 62 286 126 125 F 225 0.00 1450 reject_low 7 ALIGNMENT 0 YS2-4p16.q1k vc_1 62 286 2531 2530 F 225 0.00 1450 reject_low 1 ALIGNMENT 0 YS2-4p16.q1k vc_2 62 286 2164 2163 F 225 0.00 1450 reject_low 2 ALIGNMENT 81 YS2-4p16.q1k vc_4 375 287 1446 1534 C 89 97.75 1450 reject_low 9 ALIGNMENT 0 YS2-4p16.q1k vc_3 246 62 2513 2512 C 185 0.00 1450 reject_low 12 ALIGNMENT 0 YS2-4p16.q1k vc_5 62 286 2398 2397 F 225 0.00 1450 reject_low 4 ALIGNMENT 0 YS2-4p16.q1k vc_4 288 287 5872 6353 F 0 0.00 1450 reject_low 8 ALIGNMENT 41 YS2-4p16.q1k vc_2 287 247 2105 2145 C 41 100.00 1450 reject_low 11 ALIGNMENT 0 YS2-4p16.q1k vc_4 286 62 5813 5812 C 225 0.00 1450 reject_low 6 ALIGNMENT 0 YS2-4p16.q1k vc_2 246 62 2146 2145 C 185 0.00 1450 reject_low 11 ALIGNMENT 38 YS2-4p16.q1k vc_7 250 287 13525 13562 F 38 100.00 1450 reject_low 14 ALIGNMENT 0 YS2-4p16.q1k vc_1 246 62 2513 2512 C 185 0.00 1450 reject_low 10 ALIGNMENT 219 YS2-4p16.q1k vc_5 287 668 2398 2776 F 382 86.91 1450 reject_low 4 ALIGNMENT 0 YS2-4p16.q1k vc_7 62 249 13525 13524 F 188 0.00 1450 reject_low 14 ALIGNMENT 188 YS2-4p16.q1k chr03 36 246 162238 162447 F 211 99.05 1450 accept 0 ALIGNMENT 0 YS2-4p16.q1k vc_5 369 288 5026 5025 C 82 0.00 1450 reject_low 13 ALIGNMENT 41 YS2-4p16.q1k vc_3 287 247 2472 2512 C 41 100.00 1450 reject_low 12 ALIGNMENT 106 YS2-4p18.q1k vc_7 766 510 4924 5172 C 257 83.27 1382|0,1 reject_low 10 ALIGNMENT 0 YS2-4p18.q1k vc_1 478 301 2473 2472 C 178 0.00 1382 reject_low 12 ALIGNMENT 0 YS2-4p18.q1k vc_4 462 478 287 286 F 17 0.00 1382 reject_low 8 ALIGNMENT 39 YS2-4p18.q1k vc_5 300 262 5025 5063 C 39 100.00 1382 reject_low 15 ALIGNMENT 0 YS2-4p18.q1k vc_4 478 389 1447 1446 C 90 0.00 1382 reject_low 11 ALIGNMENT 0 YS2-4p18.q1k vc_5 478 301 5026 5025 C 178 0.00 1382 reject_low 15 ALIGNMENT 0 YS2-4p18.p1k chr04 246 264 1439905 1439904 F 19 0.00 264 accept_chi 1 ALIGNMENT 0 YS2-4p18.q1k vc_7 92 262 13525 13524 F 171 0.00 1382 reject_low 16 ALIGNMENT 0 YS2-4p18.q1k vc_7 459 92 6412 6411 C 368 0.00 1382 reject_low 10 ALIGNMENT 312 YS2-4p18.q1k vc_4 830 300 5289 5812 C 531 88.14 1382 reject_low 4 ALIGNMENT 87 YS2-4p18.q1k vc_4 388 300 1446 1534 C 89 100.00 1382 reject_low 11 ALIGNMENT 207 YS2-4p18.q1k chr04 260 39 1439684 1439905 C 222 99.55 1382 accept_chi 0 ALIGNMENT 0 YS2-4p18.q1k vc_7 299 92 2728 2727 C 208 0.00 1382 reject_low 3 ALIGNMENT 0 YS2-4p18.q1k vc_2 478 301 2106 2105 C 178 0.00 1382 reject_low 13 ALIGNMENT 319 YS2-4p18.q1k vc_7 830 300 2206 2727 C 531 88.51 1382 reject_low 3 ALIGNMENT 311 YS2-4p18.q1k vc_3 300 766 2531 2989 F 467 90.58 1382 reject_low 7 ALIGNMENT 157 YS2-4p18.q1k vc_4 300 461 126 287 F 162 99.38 1382 reject_low 8 ALIGNMENT 199 YS2-4p18.p1k chr04 32 245 1439692 1439905 F 214 99.53 264 accept_chi 1 ALIGNMENT 38 YS2-4p18.q1k vc_7 263 300 13525 13562 F 38 100.00 1382 reject_low 16 ALIGNMENT 0 YS2-4p18.q1k vc_4 92 258 5830 5829 F 167 0.00 1382 reject_low 9 ALIGNMENT 42 YS2-4p18.q1k vc_2 300 259 2105 2146 C 42 100.00 1382 reject_low 13 ALIGNMENT 42 YS2-4p18.q1k vc_3 300 259 2472 2513 C 42 100.00 1382 reject_low 14 ALIGNMENT 0 YS2-4p18.q1k vc_2 92 299 2164 2163 F 208 0.00 1382 reject_low 6 ALIGNMENT 42 YS2-4p18.q1k vc_4 259 300 5830 5871 F 42 100.00 1382 reject_low 9 ALIGNMENT 0 YS2-4p18.q1k vc_4 299 92 1535 1534 C 208 0.00 1382 reject_low 11 ALIGNMENT 0 YS2-4p18.q1k vc_7 301 478 13562 13561 F 178 0.00 1382 reject_low 16 ALIGNMENT 48 YS2-4p18.q1k vc_7 511 460 6360 6411 C 52 98.08 1382|1,0 reject_low 10 ALIGNMENT 0 YS2-4p18.q1k vc_3 92 299 2531 2530 F 208 0.00 1382 reject_low 7 ALIGNMENT 0 YS2-4p18.q1k vc_5 478 298 2 1 C 181 0.00 1382 reject_low 17 ALIGNMENT 0 YS2-4p18.q1k vc_4 301 300 5872 6353 F 0 0.00 1382 reject_low 9 ALIGNMENT 0 YS2-4p18.q1k vc_1 258 92 2514 2513 C 167 0.00 1382 reject_low 12 ALIGNMENT 0 YS2-4p18.q1k vc_5 261 92 5064 5063 C 170 0.00 1382 reject_low 15 ALIGNMENT 0 YS2-4p18.q1k vc_4 299 92 5813 5812 C 208 0.00 1382 reject_low 4 ALIGNMENT 0 YS2-4p18.q1k vc_7 510 511 5172 6360 C 0 0.00 1382 reject_low 10 ALIGNMENT 0 YS2-4p18.q1k chr04 478 261 1439685 1439684 C 218 0.00 1382 accept_chi 0 ALIGNMENT 42 YS2-4p18.q1k vc_1 300 259 2472 2513 C 42 100.00 1382 reject_low 12 ALIGNMENT 0 YS2-4p18.q1k vc_5 261 92 37 36 C 170 0.00 1382 reject_low 17 ALIGNMENT 311 YS2-4p18.q1k vc_2 300 766 2164 2622 F 467 90.58 1382 reject_low 6 ALIGNMENT 0 YS2-4p18.q1k vc_4 462 478 6514 6513 F 17 0.00 1382 reject_low 9 ALIGNMENT 0 YS2-4p18.q1k vc_4 92 299 126 125 F 208 0.00 1382 reject_low 8 ALIGNMENT 311 YS2-4p18.q1k vc_1 300 766 2531 2989 F 467 90.58 1382 reject_low 5 ALIGNMENT 0 YS2-4p18.q1k vc_3 478 301 2473 2472 C 178 0.00 1382 reject_low 14 ALIGNMENT 0 YS2-4p18.q1k vc_2 258 92 2147 2146 C 167 0.00 1382 reject_low 13 ALIGNMENT 0 YS2-4p18.q1k vc_1 92 299 2531 2530 F 208 0.00 1382 reject_low 5 ALIGNMENT 319 YS2-4p18.q1k vc_5 300 830 2398 2919 F 531 88.32 1382 reject_low 2 ALIGNMENT 36 YS2-4p18.q1k vc_5 297 262 1 36 C 36 100.00 1382 reject_low 17 ALIGNMENT 0 YS2-4p18.q1k vc_5 92 299 2398 2397 F 208 0.00 1382 reject_low 2 ALIGNMENT 0 YS2-4p18.q1k vc_3 258 92 2514 2513 C 167 0.00 1382 reject_low 14 ALIGNMENT 157 YS2-4p18.q1k vc_4 300 461 6353 6514 F 162 99.38 1382|1,0 reject_low 9 ALIGNMENT 763 YS2-4p19.q1k chr13 1038 4 588933 589957 C 1035 92.95 1322 accept 0 ALIGNMENT 1016 YS2-4p19.p1k chr13 30 1161 585581 586717 F 1132 97.79 1336 accept 0 ALIGNMENT 0 YS2-4p20.p1k chr12 905 883 290527 290526 C 23 0.00 1362 reject_low 5 ALIGNMENT 22 YS2-4p20.p1k chr13 280 240 288948 288988 C 41 85.37 1362 reject_low 8 ALIGNMENT 527 YS2-4p20.p1k chr04 43 962 1154786 1155704 F 920 86.96 1362 reject_low 1 ALIGNMENT 0 YS2-4p20.p1k chr10 905 590 27482 27481 C 316 0.00 1362 reject_low 6 ALIGNMENT 93 YS2-4p20.p1k chr15 940 492 25497 25945 C 449 75.06 1362 reject_low 7 ALIGNMENT 0 YS2-4p20.p1k chr10 513 164 733007 733356 C 350 0.00 1362 reject_low 9 ALIGNMENT 21 YS2-4p20.p1k chr04 1062 1099 1155800 1155837 F 38 86.84 1362 reject_low 1 ALIGNMENT 109 YS2-4p20.p1k chr10 589 60 27481 28010 C 530 74.34 1362 reject_low 6 ALIGNMENT 138 YS2-4p20.p1k chr13 973 398 288255 288830 C 576 76.04 1362 reject_low 8 ALIGNMENT 349 YS2-4p20.p1k chr08 363 995 291814 292446 F 633 86.26 1362 reject_low 4 ALIGNMENT 0 YS2-4p20.p1k chr13 397 281 288831 288947 C 117 0.00 1362 reject_low 8 ALIGNMENT 0 YS2-4p20.p1k chr10 905 557 732965 732964 C 349 0.00 1362 reject_low 9 ALIGNMENT 183 YS2-4p20.p1k chr12 882 347 290526 291061 C 536 80.04 1362 reject_low 5 ALIGNMENT 0 YS2-4p20.p1k chr13 239 62 288989 288988 C 178 0.00 1362 reject_low 8 ALIGNMENT 0 YS2-4p20.p1k chr10 123 62 733397 733396 C 62 0.00 1362 reject_low 9 ALIGNMENT 53 YS2-4p20.p1k chr08 66 190 291517 291641 F 125 82.40 1362 reject_low 4 ALIGNMENT 0 YS2-4p20.p1k chr04 963 1061 1155705 1155799 F 99 0.00 1362 reject_low 1 ALIGNMENT 0 YS2-4p20.p1k chr15 491 62 25946 25945 C 430 0.00 1362 reject_low 7 ALIGNMENT 0 YS2-4p20.p1k chr04 963 1061 1161097 1161191 F 99 0.00 1362 reject_low 2 ALIGNMENT 397 YS2-4p20.p1k chr04 66 979 1163550 1164463 F 914 82.39 1362 reject_low 3 ALIGNMENT 21 YS2-4p20.p1k chr04 1062 1099 1161192 1161229 F 38 86.84 1362 reject_low 2 ALIGNMENT 0 YS2-4p20.p1k chr12 346 62 291062 291061 C 285 0.00 1362 reject_low 5 ALIGNMENT 527 YS2-4p20.p1k chr04 43 962 1160178 1161096 F 920 86.96 1362 reject_low 2 ALIGNMENT 20 YS2-4p20.p1k chr10 163 124 733357 733396 C 40 85.00 1362 reject_low 9 ALIGNMENT 22 YS2-4p20.p1k chr10 556 514 732964 733006 C 43 86.05 1362 reject_low 9 ALIGNMENT 0 YS2-4p20.p1k chr08 191 362 291642 291813 F 172 0.00 1362 reject_low 4 ALIGNMENT 558 YS2-4p20.q1k chr08 721 36 292344 293023 C 686 95.04 1475 accept 0 ALIGNMENT 1051 YS2-4p20.p1k chr08 37 1239 287656 288868 F 1203 97.09 1362 accept 0 ALIGNMENT 683 YS2-4p23.q1k chr15 31 896 51173 52032 F 866 94.57 1395 accept 0 ALIGNMENT 870 YS2-4p23.p1k chr15 1268 31 54332 55604 C 1238 91.03 1281 accept 0 ALIGNMENT 281 YS2-4p24.p1k chr15 517 38 881796 882268 C 480 87.29 1462 accept 0 ALIGNMENT 0 YS2-5a01.p1k vc_3 915 92 2473 2472 C 824 0.00 1346 reject_low 9 ALIGNMENT 122 YS2-5a01.p1k vc_5 1096 916 4834 5025 C 181 91.16 1346 reject_low 5 ALIGNMENT 122 YS2-5a01.p1k vc_4 916 1096 5871 6062 F 181 91.16 1346 reject_low 4 ALIGNMENT 26 YS2-5a01.p1k vc_1 946 916 2441 2472 C 31 96.77 1346 reject_low 8 ALIGNMENT 122 YS2-5a01.p1k vc_7 916 1096 13562 13753 F 181 91.16 1346 reject_low 7 ALIGNMENT 0 YS2-5a01.p1k vc_2 915 92 2106 2105 C 824 0.00 1346 reject_low 2 ALIGNMENT 26 YS2-5a01.p1k vc_3 946 916 2441 2472 C 31 96.77 1346 reject_low 9 ALIGNMENT 0 YS2-5a01.p1k vc_7 92 915 13562 13561 F 824 0.00 1346 reject_low 7 ALIGNMENT 0 YS2-5a01.p1k vc_7 92 915 100 99 F 824 0.00 1346 reject_low 6 ALIGNMENT 0 YS2-5a01.p1k vc_5 915 92 5026 5025 C 824 0.00 1346 reject_low 5 ALIGNMENT 361 YS2-5a01.q1k chr12 603 101 394435 394936 C 503 91.85 1309 accept 0 ALIGNMENT 0 YS2-5a01.p1k vc_3 915 92 2106 2105 C 824 0.00 1346 reject_low 3 ALIGNMENT 122 YS2-5a01.p1k vc_1 1096 916 1914 2105 C 181 91.16 1346 reject_low 1 ALIGNMENT 122 YS2-5a01.p1k vc_2 1096 916 1914 2105 C 181 91.16 1346 reject_low 2 ALIGNMENT 0 YS2-5a01.p1k vc_1 915 92 2106 2105 C 824 0.00 1346 reject_low 1 ALIGNMENT 122 YS2-5a01.p1k vc_3 1096 916 1914 2105 C 181 91.16 1346 reject_low 3 ALIGNMENT 699 YS2-5a01.p1k chr12 62 897 394140 394981 F 836 95.33 1346 accept 0 ALIGNMENT 0 YS2-5a01.p1k vc_1 915 92 2473 2472 C 824 0.00 1346 reject_low 8 ALIGNMENT 122 YS2-5a01.p1k vc_7 916 1096 100 291 F 181 91.16 1346 reject_low 6 ALIGNMENT 0 YS2-5a01.p1k vc_4 92 915 5871 5870 F 824 0.00 1346 reject_low 4 ALIGNMENT 0 YS2-5a03.q1k chr05 77 122 83157 83156 F 46 0.00 1315 reject_low 1 ALIGNMENT 0 YS2-5a03.q1k chr12 124 77 556373 556372 C 48 0.00 1315 reject_low 9 ALIGNMENT 0 YS2-5a03.q1k chr13 127 77 44410 44409 C 51 0.00 1315 reject_low 11 ALIGNMENT 28 YS2-5a03.q1k chr02 165 123 780362 780404 C 43 97.67 1315 reject_low 2 ALIGNMENT 25 YS2-5a03.q1k chr13 123 165 588610 588652 F 43 95.35 1315 reject_low 4 ALIGNMENT 0 YS2-5a03.q1k chr04 124 77 747533 747532 C 48 0.00 1315 reject_low 8 ALIGNMENT 0 YS2-5a03.q1k chr02 122 77 780369 780368 C 46 0.00 1315 reject_low 10 ALIGNMENT 0 YS2-5a03.q1k chr13 77 122 588610 588609 F 46 0.00 1315 reject_low 4 ALIGNMENT 24 YS2-5a03.q1k chr15 165 133 235379 235411 C 33 100.00 1315 reject_low 6 ALIGNMENT 162 YS2-5a03.q1k chr16 14 351 185263 185605 F 338 84.02 1315 accept 0 ALIGNMENT 909 YS2-5a03.p1k chr16 1182 73 188488 189613 C 1110 95.14 1390 accept 0 ALIGNMENT 31 YS2-5a03.q1k chr05 123 165 83157 83199 F 43 100.00 1315 reject_low 1 ALIGNMENT 0 YS2-5a03.q1k chr02 123 77 780467 780466 C 47 0.00 1315 reject_low 5 ALIGNMENT 23 YS2-5a03.q1k chr12 159 125 556338 556372 C 35 97.14 1315 reject_low 9 ALIGNMENT 22 YS2-5a03.q1k chr13 162 128 44375 44409 C 35 97.14 1315 reject_low 11 ALIGNMENT 23 YS2-5a03.q1k chr11 123 162 381291 381330 F 40 95.00 1315 reject_low 7 ALIGNMENT 21 YS2-5a03.q1k chr02 159 123 780332 780368 C 37 94.59 1315 reject_low 10 ALIGNMENT 0 YS2-5a03.q1k chr11 77 122 381291 381290 F 46 0.00 1315 reject_low 7 ALIGNMENT 24 YS2-5a03.q1k chr02 165 124 780425 780466 C 42 95.24 1315 reject_low 5 ALIGNMENT 0 YS2-5a03.q1k chr15 132 77 235412 235411 C 56 0.00 1315 reject_low 6 ALIGNMENT 0 YS2-5a03.q1k chr04 127 77 654372 654371 C 51 0.00 1315 reject_low 3 ALIGNMENT 0 YS2-5a03.q1k chr02 122 77 780405 780404 C 46 0.00 1315 reject_low 2 ALIGNMENT 23 YS2-5a03.q1k chr04 165 125 747492 747532 C 41 95.12 1315 reject_low 8 ALIGNMENT 24 YS2-5a03.q1k chr04 166 128 654333 654371 C 39 94.87 1315 reject_low 3 ALIGNMENT 934 YS2-5a04.p1k chr02 1179 58 580474 581598 C 1122 95.37 1438 accept 0 ALIGNMENT 366 YS2-5a04.q1k chr02 45 637 576470 577057 F 593 88.53 1334 accept 0 ALIGNMENT 1025 YS2-5a05.p1k chr16 34 1219 873760 874949 F 1186 96.54 1425 accept 0 ALIGNMENT 430 YS2-5a05.q1k chr16 595 55 877837 878372 C 541 94.27 1337 accept 0 ALIGNMENT 612 YS2-5a06.p1k chr07 1033 46 480663 481652 C 988 87.65 1488 reject_low 1 ALIGNMENT 956 YS2-5a06.p1k chr16 41 1138 483943 485053 F 1098 96.36 1488 accept 0 ALIGNMENT 376 YS2-5a06.q1k chr16 693 63 489189 489814 C 631 88.11 1344 accept 0 ALIGNMENT 96 YS2-5a07.q1k chr01 112 312 203984 204184 F 201 83.08 1548 ambiguous_tel 1 ALIGNMENT 71 YS2-5a07.q1k chr01 261 136 27230 27355 C 126 85.71 1548 ambiguous_tel 3 ALIGNMENT 913 YS2-5a07.p1k chr01 38 1157 7667 8796 F 1120 95.62 1372 accept 0 ALIGNMENT 59 YS2-5a07.q1k chr08 132 338 539344 539550 F 207 76.81 1548 ambiguous_tel 2 ALIGNMENT 0 YS2-5a08.p1k chr07 137 366 412297 412296 F 230 0.00 1474 reject_low 12 ALIGNMENT 0 YS2-5a08.p1k chr11 366 137 379397 379396 C 230 0.00 1474 reject_low 13 ALIGNMENT 66 YS2-5a08.p1k chr07 367 441 412297 412371 F 75 96.00 1474 reject_low 12 ALIGNMENT 432 YS2-5a08.p1k chr07 589 82 823338 823844 C 508 96.65 1474 accept 0 ALIGNMENT 0 YS2-5a08.p1k chr13 442 714 586709 586708 F 273 0.00 1474 reject_low 3 ALIGNMENT 70 YS2-5a08.p1k chr05 441 361 469451 469531 C 81 96.30 1474 reject_low 6 ALIGNMENT 0 YS2-5a08.p1k chr13 137 361 420582 420581 F 225 0.00 1474 reject_low 8 ALIGNMENT 0 YS2-5a08.p1k chr12 137 360 687855 687854 F 224 0.00 1474 reject_low 7 ALIGNMENT 247 YS2-5a08.p1k chrm 584 1037 8590 9052 F 454 92.29 1474 reject_low 1 ALIGNMENT 0 YS2-5a08.p1k chr13 459 714 372536 372535 F 256 0.00 1474 reject_low 2 ALIGNMENT 0 YS2-5a08.p1k chr11 714 441 379324 379323 C 274 0.00 1474 reject_low 13 ALIGNMENT 0 YS2-5a08.p1k chr05 714 441 438697 438696 C 274 0.00 1474 reject_low 10 ALIGNMENT 0 YS2-5a08.p1k chr15 137 361 663807 663806 F 225 0.00 1474 reject_low 5 ALIGNMENT 0 YS2-5a08.p1k chr07 442 714 412371 412370 F 273 0.00 1474 reject_low 12 ALIGNMENT 69 YS2-5a08.p1k chr15 362 443 663807 663888 F 82 95.12 1474 reject_low 5 ALIGNMENT 0 YS2-5a08.p1k chr08 137 360 85288 85287 F 224 0.00 1474 reject_low 9 ALIGNMENT 0 YS2-5a08.p1k chr13 137 360 372438 372437 F 224 0.00 1474 reject_low 2 ALIGNMENT 66 YS2-5a08.p1k chr05 440 361 438696 438775 C 80 95.00 1474 reject_low 10 ALIGNMENT 0 YS2-5a08.p1k chr10 360 137 378356 378355 C 224 0.00 1474 reject_low 11 ALIGNMENT 67 YS2-5a08.p1k chr08 361 441 85288 85368 F 81 95.06 1474 reject_low 9 ALIGNMENT 0 YS2-5a08.p1k chr13 441 714 420660 420659 F 274 0.00 1474 reject_low 8 ALIGNMENT 0 YS2-5a08.p1k chr08 442 714 85368 85367 F 273 0.00 1474 reject_low 9 ALIGNMENT 0 YS2-5a08.p1k chr05 714 442 469452 469451 C 273 0.00 1474 reject_low 6 ALIGNMENT 0 YS2-5a08.p1k chr15 444 714 663888 663887 F 271 0.00 1474 reject_low 5 ALIGNMENT 0 YS2-5a08.p1k chr05 360 137 469532 469531 C 224 0.00 1474 reject_low 6 ALIGNMENT 69 YS2-5a08.p1k chr11 361 443 307783 307865 F 83 95.18 1474 reject_low 4 ALIGNMENT 72 YS2-5a08.p1k chr13 356 441 586623 586709 F 86 95.35 1474 reject_low 3 ALIGNMENT 0 YS2-5a08.p1k chr13 137 355 586623 586622 F 219 0.00 1474 reject_low 3 ALIGNMENT 72 YS2-5a08.p1k chr13 361 458 372438 372536 F 98 91.84 1474 reject_low 2 ALIGNMENT 0 YS2-5a08.p1k chrm 137 583 8590 8589 F 447 0.00 1474 reject_low 1 ALIGNMENT 0 YS2-5a08.p1k chr12 441 714 687934 687933 F 274 0.00 1474 reject_low 7 ALIGNMENT 69 YS2-5a08.p1k chr13 362 440 420582 420660 F 79 96.20 1474 reject_low 8 ALIGNMENT 69 YS2-5a08.p1k chr12 361 440 687855 687934 F 80 96.25 1474 reject_low 7 ALIGNMENT 0 YS2-5a08.p1k chr11 444 714 307865 307864 F 271 0.00 1474 reject_low 4 ALIGNMENT 65 YS2-5a08.p1k chr11 440 367 379323 379396 C 74 95.95 1474 reject_low 13 ALIGNMENT 0 YS2-5a08.p1k chr10 714 441 378277 378276 C 274 0.00 1474 reject_low 11 ALIGNMENT 0 YS2-5a08.p1k chr11 137 360 307783 307782 F 224 0.00 1474 reject_low 4 ALIGNMENT 0 YS2-5a08.p1k chr05 360 137 438776 438775 C 224 0.00 1474 reject_low 10 ALIGNMENT 66 YS2-5a08.p1k chr10 440 361 378276 378355 C 80 95.00 1474 reject_low 11 ALIGNMENT 0 YS2-5a08.p1k chr07 714 590 823339 823338 C 125 0.00 1474 accept 0 ALIGNMENT 978 YS2-5a09.p1k chr12 1076 27 466250 467309 C 1050 98.48 1358 accept 1 ALIGNMENT 443 YS2-5a09.q1k chr12 61 598 456439 456972 F 538 95.35 1330 accept 0 ALIGNMENT 978 YS2-5a09.p1k chr12 1076 27 457113 458172 C 1050 98.48 1358 accept 0 ALIGNMENT 443 YS2-5a09.q1k chr12 61 598 465576 466109 F 538 95.35 1330 accept 1 ALIGNMENT 135 YS2-5a11.p1k vc_5 273 6 4417 4672 C 268 86.57 678 reject_vc 3 ALIGNMENT 134 YS2-5a11.p1k vc_7 6 269 453 704 F 264 86.74 678 reject_vc 5 ALIGNMENT 135 YS2-5a11.p1k vc_2 273 6 1497 1752 C 268 86.57 678 reject_vc 1 ALIGNMENT 135 YS2-5a11.p1k vc_3 273 6 1497 1752 C 268 86.57 678 reject_vc 2 ALIGNMENT 135 YS2-5a11.p1k vc_6 6 273 3709 3964 F 268 86.57 678 reject_vc 4 ALIGNMENT 134 YS2-5a11.p1k vc_7 6 269 13915 14166 F 264 86.74 678 reject_vc 6 ALIGNMENT 135 YS2-5a11.p1k vc_1 273 6 1497 1752 C 268 86.57 678 reject_vc 0 ALIGNMENT 0 YS2-5a12.q1k vc_3 361 107 2513 2512 C 255 0.00 1355 reject_low 7 ALIGNMENT 80 YS2-5a12.q1k vc_7 619 405 2520 2726 C 215 81.86 1355 reject_low 5 ALIGNMENT 0 YS2-5a12.p1k chr09 363 345 407124 407123 C 19 0.00 363 accept_chi 0 ALIGNMENT 0 YS2-5a12.q1k vc_1 107 404 2532 2531 F 298 0.00 1355 reject_low 2 ALIGNMENT 0 YS2-5a12.q1k vc_5 363 107 5064 5063 C 257 0.00 1355 reject_low 8 ALIGNMENT 0 YS2-5a12.q1k vc_7 404 107 2727 2726 C 298 0.00 1355 reject_low 5 ALIGNMENT 0 YS2-5a12.q1k vc_5 363 107 37 36 C 257 0.00 1355 reject_low 10 ALIGNMENT 0 YS2-5a12.q1k vc_7 107 364 13525 13524 F 258 0.00 1355 reject_low 9 ALIGNMENT 35 YS2-5a12.q1k vc_5 403 364 5025 5063 C 40 97.50 1355 reject_low 8 ALIGNMENT 34 YS2-5a12.q1k vc_7 365 403 13525 13562 F 39 97.44 1355 reject_low 9 ALIGNMENT 80 YS2-5a12.q1k vc_3 405 619 2532 2738 F 215 81.86 1355 reject_low 3 ALIGNMENT 279 YS2-5a12.q1k chr09 55 362 407126 407434 F 308 97.40 1355 accept_chi 1 ALIGNMENT 32 YS2-5a12.q1k vc_5 400 364 1 36 C 37 97.30 1355 reject_low 10 ALIGNMENT 0 YS2-5a12.q1k vc_3 107 404 2532 2531 F 298 0.00 1355 reject_low 3 ALIGNMENT 37 YS2-5a12.q1k vc_3 403 362 2472 2512 C 42 97.62 1355 reject_low 7 ALIGNMENT 80 YS2-5a12.q1k vc_5 405 619 2399 2605 F 215 81.86 1355 reject_low 4 ALIGNMENT 0 YS2-5a12.q1k vc_1 361 107 2513 2512 C 255 0.00 1355 reject_low 6 ALIGNMENT 0 YS2-5a12.q1k vc_5 107 404 2399 2398 F 298 0.00 1355 reject_low 4 ALIGNMENT 80 YS2-5a12.q1k vc_1 405 619 2532 2738 F 215 81.86 1355 reject_low 2 ALIGNMENT 37 YS2-5a12.q1k vc_1 403 362 2472 2512 C 42 97.62 1355 reject_low 6 ALIGNMENT 308 YS2-5a12.p1k chr09 344 33 407123 407434 C 312 99.68 363 accept_chi 0 ALIGNMENT 227 YS2-5a14.q1k chr10 438 74 258743 259093 C 365 91.51 1638 accept 0 ALIGNMENT 568 YS2-5a15.p1k chr08 654 67 179954 180541 C 588 99.49 655 accept_chi 0 ALIGNMENT 326 YS2-5a15.q1k chr08 12 528 180002 180511 F 517 89.56 1235 accept_chi 1 ALIGNMENT 952 YS2-5a16.p1k chr02 1113 70 173730 174787 C 1044 98.47 1402 accept 0 ALIGNMENT 920 YS2-5a17.p1k chr06 1147 75 234158 235228 C 1073 96.27 1404 accept 0 ALIGNMENT 358 YS2-5a17.q1k chr06 32 509 234009 234483 F 478 93.10 1540 accept 0 ALIGNMENT 634 YS2-5a18.p1k chr06 950 69 234316 235227 C 882 91.61 1302 accept 0 ALIGNMENT 348 YS2-5a19.q1k chr11 538 32 51351 51855 C 507 91.72 1329 accept 0 ALIGNMENT 1003 YS2-5a19.p1k chr11 63 1227 48326 49500 F 1165 95.97 1362 accept 0 ALIGNMENT 352 YS2-5a20.q1k chr05 690 100 408710 409288 C 591 89.34 1325 accept 0 ALIGNMENT 953 YS2-5a20.p1k chr05 66 1152 403665 404765 F 1087 97.06 1413 accept 0 ALIGNMENT 1007 YS2-5a21.p1k chr05 71 1231 102144 103309 F 1161 96.64 1357 accept 0 ALIGNMENT 497 YS2-5a21.q1k chr05 683 22 106531 107193 C 662 92.90 1262 accept 0 ALIGNMENT 558 YS2-5a22.q1k chr05 746 62 106508 107188 C 685 95.04 1330 accept 0 ALIGNMENT 965 YS2-5a22.p1k chr05 76 1157 102143 103234 F 1082 97.69 1371 accept 0 ALIGNMENT 724 YS2-5a23.q1k chr16 4 858 733232 734082 F 855 96.14 1169 accept 0 ALIGNMENT 424 YS2-5b01.p1k chr14 528 78 342518 342968 C 451 98.89 546 accept 0 ALIGNMENT 0 YS2-5b01.p1k chr14 546 529 342519 342518 C 18 0.00 546 accept 0 ALIGNMENT 939 YS2-5b03.p1k chr13 71 1143 58807 59892 F 1073 97.67 1428 accept 0 ALIGNMENT 583 YS2-5b03.q1k chr13 778 3 60456 61219 C 776 93.94 1208 accept 0 ALIGNMENT 278 YS2-5b05.p1k vc_3 464 1 1263 1749 C 464 88.58 744 reject_vc 2 ALIGNMENT 278 YS2-5b05.p1k vc_7 1 464 13918 14404 F 464 88.58 744 reject_vc 5 ALIGNMENT 278 YS2-5b05.p1k vc_1 464 1 1263 1749 C 464 88.58 744 reject_vc 0 ALIGNMENT 278 YS2-5b05.p1k vc_2 464 1 1263 1749 C 464 88.58 744 reject_vc 1 ALIGNMENT 269 YS2-5b05.p1k vc_6 1 406 3712 4135 F 406 90.64 744 reject_low 6 ALIGNMENT 278 YS2-5b05.p1k vc_5 464 1 4183 4669 C 464 88.58 744 reject_vc 3 ALIGNMENT 278 YS2-5b05.p1k vc_7 1 464 456 942 F 464 88.58 744 reject_vc 4 ALIGNMENT 918 YS2-5b06.p1k chr04 38 1053 1166483 1167512 F 1016 98.03 1394 accept 0 ALIGNMENT 754 YS2-5b06.q1k chr04 937 29 1170520 1171422 C 909 95.16 1295 accept 0 ALIGNMENT 232 YS2-5b07.q1k vc_2 1 299 2322 2623 F 299 92.98 789 reject_low 4 ALIGNMENT 0 YS2-5b07.q1k vc_7 53 54 5172 6360 C 0 0.00 789 reject_low 6 ALIGNMENT 239 YS2-5b07.q1k vc_4 359 1 5290 5654 C 359 89.69 789 reject_vc 2 ALIGNMENT 178 YS2-5b07.q1k vc_7 299 53 4923 5172 C 247 91.09 789|0,1 reject_low 6 ALIGNMENT 232 YS2-5b07.q1k vc_1 1 299 2689 2990 F 299 92.98 789 reject_low 3 ALIGNMENT 246 YS2-5b07.q1k vc_7 359 1 2207 2569 C 359 90.25 789 reject_vc 1 ALIGNMENT 51 YS2-5b07.q1k vc_7 54 3 6360 6411 C 52 100.00 789|1,0 reject_low 6 ALIGNMENT 246 YS2-5b07.q1k vc_5 1 359 2556 2918 F 359 90.25 789 reject_vc 0 ALIGNMENT 232 YS2-5b07.q1k vc_3 1 299 2689 2990 F 299 92.98 789 reject_low 5 ALIGNMENT 242 YS2-5b11.p1k vc_2 400 1 1479 1875 C 400 88.25 672 reject_vc 2 ALIGNMENT 242 YS2-5b11.p1k vc_1 400 1 1479 1875 C 400 88.25 672 reject_vc 1 ALIGNMENT 366 YS2-5b11.q1k chr11 574 59 638372 638882 C 516 92.44 1379 accept 0 ALIGNMENT 241 YS2-5b11.p1k vc_6 1 396 3586 3978 F 396 88.38 672 reject_vc 5 ALIGNMENT 236 YS2-5b11.p1k vc_7 1 400 13792 14188 F 400 87.75 672 reject_vc 7 ALIGNMENT 105 YS2-5b11.p1k vc_4 1 125 6101 6223 F 125 96.00 672 reject_vc 8 ALIGNMENT 242 YS2-5b11.p1k vc_3 400 1 1479 1875 C 400 88.25 672 reject_vc 3 ALIGNMENT 236 YS2-5b11.p1k vc_7 1 400 330 726 F 400 87.75 672 reject_vc 6 ALIGNMENT 242 YS2-5b11.p1k vc_5 400 1 4399 4795 C 400 88.25 672 reject_vc 4 ALIGNMENT 465 YS2-5b12.q1k chr07 757 64 1008171 1008851 C 694 91.21 1392 accept 0 ALIGNMENT 927 YS2-5b12.p1k chr07 63 1181 1007244 1008379 F 1119 95.98 1403 accept 0 ALIGNMENT 665 YS2-5b13.q1k chr11 751 3 543977 544721 C 749 97.73 1276 accept 0 ALIGNMENT 915 YS2-5b13.p1k chr11 43 1074 540452 541498 F 1032 97.67 1430 accept 0 ALIGNMENT 344 YS2-5b14.p1k vc_1 565 1 1174 1749 C 565 88.32 904 reject_vc 2 ALIGNMENT 344 YS2-5b14.p1k vc_3 565 1 1174 1749 C 565 88.32 904 reject_vc 4 ALIGNMENT 344 YS2-5b14.p1k vc_2 565 1 1174 1749 C 565 88.32 904 reject_vc 3 ALIGNMENT 346 YS2-5b14.p1k vc_5 565 1 4094 4669 C 565 88.32 904 reject_vc 0 ALIGNMENT 346 YS2-5b14.p1k vc_6 1 565 3712 4287 F 565 88.50 904 reject_vc 1 ALIGNMENT 338 YS2-5b14.p1k vc_7 1 565 456 1031 F 565 87.96 904 reject_vc 5 ALIGNMENT 338 YS2-5b14.p1k vc_7 1 565 13918 14493 F 565 87.96 904 reject_vc 6 ALIGNMENT 921 YS2-5b15.p1k chr12 1089 71 894839 895866 C 1019 98.04 1450 accept 0 ALIGNMENT 1010 YS2-5b16.p1k chr04 1208 63 374124 375280 C 1146 97.64 1468 accept 0 ALIGNMENT 947 YS2-5b17.p1k chr10 32 1088 722568 723641 F 1057 97.54 1425 accept 0 ALIGNMENT 223 YS2-5b17.q1k chr14 50 623 16651 17222 F 574 80.31 1462 reject_low 3 ALIGNMENT 503 YS2-5b17.q1k chr10 667 50 727038 727653 C 618 94.66 1462 accept 0 ALIGNMENT 155 YS2-5b17.q1k chr03 506 50 314020 314474 C 457 78.77 1462 reject_low 4 ALIGNMENT 227 YS2-5b17.q1k chr04 52 623 18109 18678 F 572 80.59 1462 reject_low 2 ALIGNMENT 248 YS2-5b17.q1k chr06 50 623 14835 15405 F 574 81.88 1462 reject_low 1 ALIGNMENT 940 YS2-5b18.p1k chr08 65 1185 78925 80054 F 1121 96.61 1469 accept 0 ALIGNMENT 933 YS2-5b21.p1k chr04 73 1118 120154 121209 F 1046 97.80 1392 accept 0 ALIGNMENT 525 YS2-5b21.q1k chr04 676 4 121278 121949 C 673 93.76 1086 accept 0 ALIGNMENT 551 YS2-5b22.q1k chr11 784 50 191994 192724 C 735 93.33 1300 accept 0 ALIGNMENT 862 YS2-5b22.p1k chr11 75 1076 191141 192161 F 1002 96.71 1327 accept 0 ALIGNMENT 964 YS2-5b23.p1k chr08 1217 70 110558 111711 C 1148 96.25 1376 accept 0 ALIGNMENT 656 YS2-5b23.q1k chr08 48 853 109876 110671 F 806 95.66 1393 accept 0 ALIGNMENT 472 YS2-5b24.p1k chr08 1071 78 110715 111711 C 994 83.70 1349 accept_chi 0 ALIGNMENT 317 YS2-5b24.q1k chr08 1102 376 110696 111428 C 727 81.84 1203 accept_chi 1 ALIGNMENT 494 YS2-5c02.q1k chr08 57 761 413408 414108 F 705 93.48 1458 accept 0 ALIGNMENT 858 YS2-5c02.p1k chr08 1032 71 414441 415415 C 962 98.02 1378 accept 0 ALIGNMENT 891 YS2-5c03.p1k chr07 1056 73 904468 905467 C 984 97.76 1369 accept 0 ALIGNMENT 422 YS2-5c03.q1k chr07 49 642 901210 901802 F 594 91.41 1283 accept 0 ALIGNMENT 962 YS2-5c05.p1k chr02 63 1235 436766 437948 F 1173 95.48 1426 accept 0 ALIGNMENT 242 YS2-5c05.q1k chr02 402 18 437853 438235 C 385 89.09 1376 accept 0 ALIGNMENT 954 YS2-5c06.p1k chr10 1172 35 129317 130441 C 1138 96.57 1600 accept 0 ALIGNMENT 510 YS2-5c06.q1k chr10 46 743 125900 126590 F 698 92.26 1381 accept 0 ALIGNMENT 0 YS2-5c08.p1k chrm 227 832 8381 8380 F 606 0.00 1546 reject_low 4 ALIGNMENT 33 YS2-5c08.p1k chrm 127 83 12268 12312 C 45 93.33 1546 reject_low 5 ALIGNMENT 0 YS2-5c08.p1k chrm 218 832 69570 69569 F 615 0.00 1546 reject_low 3 ALIGNMENT 80 YS2-5c08.p1k chrm 227 81 67838 67992 C 147 89.80 1546 reject_low 1 ALIGNMENT 27 YS2-5c08.p1k chrm 83 226 8234 8381 F 144 79.17 1546 reject_low 4 ALIGNMENT 30 YS2-5c08.p1k chrm 81 128 73007 73053 F 48 89.58 1546 reject_low 7 ALIGNMENT 37 YS2-5c08.p1k chrm 79 217 69438 69570 F 139 82.73 1546 reject_low 3 ALIGNMENT 0 YS2-5c08.p1k chrm 132 190 35853 35931 F 59 0.00 1546 reject_bad_break 0 ALIGNMENT 0 YS2-5c08.p1k chr04 832 348 149125 149124 C 485 0.00 1546 reject_low 2 ALIGNMENT 597 YS2-5c08.p1k chrm 191 1049 35932 36785 F 859 97.56 1546 reject_bad_break 0 ALIGNMENT 0 YS2-5c08.p1k chr04 299 77 149172 149171 C 223 0.00 1546 reject_low 2 ALIGNMENT 296 YS2-5c08.q1k chrm 549 51 37653 38146 C 499 92.59 1467 reject_bad_break 0 ALIGNMENT 0 YS2-5c08.p1k chrm 832 128 12269 12268 C 705 0.00 1546 reject_low 5 ALIGNMENT 0 YS2-5c08.p1k chrm 832 228 67839 67838 C 605 0.00 1546 reject_low 1 ALIGNMENT 32 YS2-5c08.p1k chrm 83 126 34933 34976 F 44 93.18 1546 reject_low 6 ALIGNMENT 0 YS2-5c08.p1k chrm 127 832 34976 34975 F 706 0.00 1546 reject_low 6 ALIGNMENT 48 YS2-5c08.p1k chrm 75 131 35796 35852 F 57 94.74 1546 reject_bad_break 0 ALIGNMENT 0 YS2-5c08.p1k chrm 129 832 73053 73052 F 704 0.00 1546 reject_low 7 ALIGNMENT 20 YS2-5c08.p1k chr04 347 300 149124 149171 C 48 100.00 1546 reject_low 2 ALIGNMENT 941 YS2-5c10.p1k chr12 66 1105 566926 567975 F 1040 97.40 1427 accept 0 ALIGNMENT 464 YS2-5c10.q1k chr12 784 114 570278 570940 C 671 91.80 1425 accept 0 ALIGNMENT 949 YS2-5c11.p1k chr04 1099 58 990611 991660 C 1042 98.27 1369 ambiguous_trans 7 ALIGNMENT 934 YS2-5c11.p1k chr10 58 1099 473357 474406 F 1042 97.79 1369 ambiguous_trans 20 ALIGNMENT 946 YS2-5c11.p1k chr04 1099 58 882190 883239 C 1042 98.18 1369 ambiguous_trans 14 ALIGNMENT 952 YS2-5c11.p1k chr12 1099 58 218977 220026 C 1042 98.37 1369 ambiguous_trans_ua 3 ALIGNMENT 952 YS2-5c11.p1k chr08 1099 58 547500 548549 C 1042 98.37 1369 ambiguous_trans 2 ALIGNMENT 937 YS2-5c11.p1k chr04 1099 58 649389 650438 C 1042 97.89 1369 ambiguous_trans 16 ALIGNMENT 946 YS2-5c11.p1k chr02 58 1099 260550 261599 F 1042 98.18 1369 ambiguous_trans 13 ALIGNMENT 934 YS2-5c11.p1k chr07 58 1099 536744 537793 F 1042 97.79 1369 ambiguous_trans 19 ALIGNMENT 949 YS2-5c11.p1k chr07 1099 58 821288 822337 C 1042 98.27 1369 ambiguous_trans 8 ALIGNMENT 934 YS2-5c11.p1k chr16 1099 58 854521 855570 C 1042 97.79 1369 ambiguous_trans 22 ALIGNMENT 949 YS2-5c11.p1k chr16 58 1099 845388 846437 F 1042 98.27 1369 ambiguous_trans 12 ALIGNMENT 934 YS2-5c11.p1k chr12 58 1099 594123 595172 F 1042 97.79 1369 ambiguous_trans 21 ALIGNMENT 937 YS2-5c11.p1k chr13 58 1099 197311 198360 F 1042 97.89 1369 ambiguous_trans 18 ALIGNMENT 949 YS2-5c11.p1k chr01 1099 58 164135 165184 C 1042 98.27 1369 ambiguous_trans 6 ALIGNMENT 952 YS2-5c11.p1k chr04 58 1099 1096742 1097791 F 1042 98.37 1369 ambiguous_trans 0 ALIGNMENT 937 YS2-5c11.p1k chr07 1099 58 565739 566788 C 1042 97.89 1369 ambiguous_trans 17 ALIGNMENT 952 YS2-5c11.p1k chr05 1099 58 496387 497436 C 1042 98.37 1369 ambiguous_trans 1 ALIGNMENT 952 YS2-5c11.p1k chr13 58 1099 185144 186193 F 1042 98.37 1369 ambiguous_trans 4 ALIGNMENT 667 YS2-5c11.p1k chr13 1099 58 360894 361943 C 1042 89.25 1369 reject_low 24 ALIGNMENT 946 YS2-5c11.p1k chr14 58 1099 520140 521189 F 1042 98.18 1369 ambiguous_trans 15 ALIGNMENT 952 YS2-5c11.p1k chr13 1099 58 376592 377641 C 1042 98.37 1369 ambiguous_trans 5 ALIGNMENT 670 YS2-5c11.p1k chr02 58 1099 222016 223065 F 1042 89.35 1369 reject_low 23 ALIGNMENT 949 YS2-5c11.p1k chr16 1099 58 808533 809582 C 1042 98.27 1369 ambiguous_trans 11 ALIGNMENT 949 YS2-5c11.p1k chr10 58 1099 478941 479990 F 1042 98.27 1369 ambiguous_trans 9 ALIGNMENT 949 YS2-5c11.p1k chr15 58 1099 595795 596844 F 1042 98.27 1369 ambiguous_trans 10 ALIGNMENT 1027 YS2-5c12.p1k chr16 33 1158 558504 559635 F 1126 97.87 1520 accept 0 ALIGNMENT 447 YS2-5c12.q1k chr16 598 51 561841 562386 C 548 94.71 1406 accept 0 ALIGNMENT 525 YS2-5c14.q1k chr13 694 53 228578 229217 C 642 94.70 1351 accept 0 ALIGNMENT 886 YS2-5c14.p1k chr13 79 1045 224716 225690 F 967 97.93 1420 accept 0 ALIGNMENT 0 YS2-5c15.q1k vc_7 200 62 2728 2727 C 139 0.00 1252 reject_low 6 ALIGNMENT 30 YS2-5c15.q1k vc_1 201 161 2472 2511 C 41 92.68 1252 reject_low 10 ALIGNMENT 66 YS2-5c15.q1k vc_4 286 201 1449 1534 C 86 93.02 1252 reject_low 9 ALIGNMENT 0 YS2-5c15.q1k vc_4 62 160 5832 5831 F 99 0.00 1252 reject_low 8 ALIGNMENT 157 YS2-5c15.q1k vc_1 201 484 2531 2803 F 284 88.38 1252 reject_low 2 ALIGNMENT 0 YS2-5c15.q1k vc_5 62 200 2398 2397 F 139 0.00 1252 reject_low 5 ALIGNMENT 30 YS2-5c15.q1k vc_3 201 161 2472 2511 C 41 92.68 1252 reject_low 12 ALIGNMENT 128 YS2-5c15.q1k vc_4 201 363 6353 6514 F 163 93.87 1252|1,0 reject_low 8 ALIGNMENT 157 YS2-5c15.q1k vc_7 484 201 2455 2727 C 284 88.38 1252 reject_low 6 ALIGNMENT 0 YS2-5c15.q1k vc_1 160 62 2512 2511 C 99 0.00 1252 reject_low 10 ALIGNMENT 0 YS2-5c15.q1k vc_2 62 200 2164 2163 F 139 0.00 1252 reject_low 3 ALIGNMENT 0 YS2-5c15.q1k vc_4 202 201 5872 6353 F 0 0.00 1252 reject_low 8 ALIGNMENT 157 YS2-5c15.q1k vc_2 201 484 2164 2436 F 284 88.38 1252 reject_low 3 ALIGNMENT 26 YS2-5c15.q1k vc_5 198 162 1 36 C 37 91.89 1252 reject_low 14 ALIGNMENT 126 YS2-5c15.q1k chr11 160 15 442740 442884 C 146 97.95 1252 accept 0 ALIGNMENT 0 YS2-5c15.q1k vc_4 200 62 1535 1534 C 139 0.00 1252 reject_low 9 ALIGNMENT 158 YS2-5c15.q1k vc_4 484 201 5538 5812 C 284 88.38 1252 reject_low 1 ALIGNMENT 0 YS2-5c15.q1k vc_3 160 62 2512 2511 C 99 0.00 1252 reject_low 12 ALIGNMENT 0 YS2-5c15.q1k vc_4 200 62 5813 5812 C 139 0.00 1252 reject_low 1 ALIGNMENT 157 YS2-5c15.q1k vc_3 201 484 2531 2803 F 284 88.38 1252 reject_low 4 ALIGNMENT 128 YS2-5c15.q1k vc_4 201 363 126 287 F 163 93.87 1252 reject_low 7 ALIGNMENT 30 YS2-5c15.q1k vc_4 161 201 5832 5871 F 41 92.68 1252 reject_low 8 ALIGNMENT 157 YS2-5c15.q1k vc_5 201 484 2398 2670 F 284 88.38 1252 reject_low 5 ALIGNMENT 0 YS2-5c15.q1k vc_2 160 62 2145 2144 C 99 0.00 1252 reject_low 11 ALIGNMENT 0 YS2-5c15.q1k vc_5 161 62 5064 5063 C 100 0.00 1252 reject_low 13 ALIGNMENT 29 YS2-5c15.q1k vc_5 201 162 5025 5063 C 40 92.50 1252 reject_low 13 ALIGNMENT 0 YS2-5c15.q1k vc_3 62 200 2531 2530 F 139 0.00 1252 reject_low 4 ALIGNMENT 0 YS2-5c15.q1k vc_5 161 62 37 36 C 100 0.00 1252 reject_low 14 ALIGNMENT 0 YS2-5c15.q1k vc_1 62 200 2531 2530 F 139 0.00 1252 reject_low 2 ALIGNMENT 30 YS2-5c15.q1k vc_2 201 161 2105 2144 C 41 92.68 1252 reject_low 11 ALIGNMENT 0 YS2-5c15.q1k vc_4 62 200 126 125 F 139 0.00 1252 reject_low 7 ALIGNMENT 666 YS2-5c16.p1k chr14 32 979 101573 102520 F 948 91.03 1438 ambiguous_trans 4 ALIGNMENT 897 YS2-5c16.p1k chr13 32 979 361967 362914 F 948 99.05 1438 ambiguous_trans 1 ALIGNMENT 0 YS2-5c16.p1k chr01 62 650 160239 160238 F 589 0.00 1438 ambiguous_trans 22 ALIGNMENT 591 YS2-5c16.p1k chr12 33 979 220051 221003 F 947 88.38 1438 ambiguous_trans_ua 17 ALIGNMENT 594 YS2-5c16.p1k chr16 979 33 844411 845363 C 947 88.49 1438 ambiguous_trans 15 ALIGNMENT 0 YS2-5c16.p1k chr08 180 866 548720 548719 F 687 0.00 1438 ambiguous_trans 24 ALIGNMENT 566 YS2-5c16.p1k chr01 33 979 165209 166160 F 947 87.65 1438 ambiguous_trans 20 ALIGNMENT 591 YS2-5c16.p1k chr05 33 979 497461 498413 F 947 88.38 1438 ambiguous_trans 16 ALIGNMENT 627 YS2-5c16.p1k chr16 33 979 855595 856547 F 947 89.65 1438 ambiguous_trans 7 ALIGNMENT 633 YS2-5c16.p1k chr10 979 33 472380 473332 C 947 89.86 1438 ambiguous_trans 5 ALIGNMENT 63 YS2-5c16.p1k chr15 840 735 594654 594759 C 106 88.68 1438 ambiguous_trans_ua 25 ALIGNMENT 29 YS2-5c16.p1k chr16 979 943 56412 56448 C 37 94.59 1438 ambiguous_trans_ua 27 ALIGNMENT 626 YS2-5c16.p1k chr07 33 979 822362 823308 F 947 89.55 1438 ambiguous_trans 8 ALIGNMENT 613 YS2-5c16.q1k chr06 800 3 103710 104503 C 798 93.73 1174 accept 0 ALIGNMENT 41 YS2-5c16.p1k chr05 931 825 449346 449452 C 107 84.11 1438 ambiguous_trans_ua 26 ALIGNMENT 631 YS2-5c16.p1k chr07 979 33 535767 536719 C 947 89.86 1438 ambiguous_trans 6 ALIGNMENT 0 YS2-5c16.p1k chr15 734 62 594760 594759 C 673 0.00 1438 ambiguous_trans_ua 25 ALIGNMENT 24 YS2-5c16.p1k chr14 989 953 102542 102578 C 37 89.19 1438 ambiguous_trans_ua 23 ALIGNMENT 597 YS2-5c16.p1k chr04 979 33 1095765 1096717 C 947 88.60 1438 ambiguous_trans 13 ALIGNMENT 853 YS2-5c16.p1k chr04 979 32 802903 803849 C 948 97.57 1438 ambiguous_trans_ua 3 ALIGNMENT 192 YS2-5c16.p1k chr01 651 979 160239 160572 F 329 88.45 1438 ambiguous_trans 22 ALIGNMENT 0 YS2-5c16.p1k chr14 952 62 102579 102578 C 891 0.00 1438 ambiguous_trans_ua 23 ALIGNMENT 620 YS2-5c16.p1k chr13 979 33 184173 185119 C 947 89.33 1438 ambiguous_trans 11 ALIGNMENT 0 YS2-5c16.p1k chr16 942 62 56449 56448 C 881 0.00 1438 ambiguous_trans_ua 27 ALIGNMENT 103 YS2-5c16.p1k chr08 33 179 548574 548720 F 147 91.16 1438 ambiguous_trans 24 ALIGNMENT 620 YS2-5c16.p1k chr02 979 33 259579 260525 C 947 89.33 1438 ambiguous_trans 10 ALIGNMENT 623 YS2-5c16.p1k chr15 979 33 594824 595770 C 947 89.44 1438 ambiguous_trans 9 ALIGNMENT 615 YS2-5c16.p1k chr15 979 33 117705 118657 C 947 89.23 1438 ambiguous_trans 12 ALIGNMENT 893 YS2-5c16.p1k chr02 979 32 221043 221992 C 948 98.95 1438 ambiguous_trans 2 ALIGNMENT 0 YS2-5c16.p1k chr15 866 841 594655 594654 C 26 0.00 1438 ambiguous_trans_ua 25 ALIGNMENT 563 YS2-5c16.p1k chr13 979 33 196335 197286 C 947 87.43 1438 ambiguous_trans 21 ALIGNMENT 0 YS2-5c16.p1k chr05 824 62 449453 449452 C 763 0.00 1438 ambiguous_trans_ua 26 ALIGNMENT 569 YS2-5c16.p1k chr16 979 33 56455 57406 C 947 87.65 1438 ambiguous_trans 19 ALIGNMENT 569 YS2-5c16.p1k chr05 33 979 448362 449313 F 947 87.65 1438 ambiguous_trans 18 ALIGNMENT 595 YS2-5c16.p1k chr08 64 979 548719 549634 F 916 89.19 1438 ambiguous_trans 14 ALIGNMENT 291 YS2-5c17.p1k chr11 375 65 625930 626239 C 311 99.04 394 accept 0 ALIGNMENT 0 YS2-5c17.p1k chr11 394 376 625931 625930 C 19 0.00 394 accept 0 ALIGNMENT 236 YS2-5c18.q1k vc_2 1 298 2322 2616 F 298 93.96 1092 reject_low 4 ALIGNMENT 188 YS2-5c18.q1k vc_7 298 54 4930 5172 C 245 93.06 1092 reject_low 6 ALIGNMENT 255 YS2-5c18.q1k vc_5 1 372 2556 2922 F 372 90.59 1092 reject_vc 0 ALIGNMENT 255 YS2-5c18.q1k vc_7 372 1 2203 2569 C 372 90.59 1092 reject_vc 1 ALIGNMENT 248 YS2-5c18.q1k vc_4 372 1 5286 5654 C 372 90.05 1092 reject_vc 2 ALIGNMENT 236 YS2-5c18.q1k vc_1 1 298 2689 2983 F 298 93.96 1092 reject_low 3 ALIGNMENT 236 YS2-5c18.q1k vc_3 1 298 2689 2983 F 298 93.96 1092 reject_low 5 ALIGNMENT 426 YS2-5c20.q1k chr04 704 65 1189556 1190192 C 640 90.78 1283 accept 0 ALIGNMENT 950 YS2-5c20.p1k chr04 80 1195 1185577 1186711 F 1116 96.59 1447 accept 0 ALIGNMENT 960 YS2-5c21.p1k chr08 72 1135 174320 175382 F 1064 97.09 1398 accept 0 ALIGNMENT 361 YS2-5c21.q1k chr08 609 56 176594 177149 C 554 89.17 1310 accept 0 ALIGNMENT 979 YS2-5c22.p1k chr09 61 1228 423408 424589 F 1168 95.46 1415 accept 0 ALIGNMENT 519 YS2-5c22.q1k chr09 772 1 425299 426065 C 772 90.16 1127 accept 0 ALIGNMENT 0 YS2-5d01.q1k vc_7 62 391 63 62 F 330 0.00 1365 reject_low 17 ALIGNMENT 0 YS2-5d01.q1k vc_1 526 430 2473 2472 C 97 0.00 1365 reject_low 13 ALIGNMENT 41 YS2-5d01.q1k vc_4 389 429 5831 5871 F 41 100.00 1365 reject_low 9 ALIGNMENT 216 YS2-5d01.q1k vc_4 760 429 5487 5812 C 332 90.66 1365 reject_low 7 ALIGNMENT 0 YS2-5d01.q1k vc_7 428 62 2728 2727 C 367 0.00 1365 reject_low 6 ALIGNMENT 223 YS2-5d01.q1k vc_1 429 760 2531 2854 F 332 91.27 1365 reject_low 2 ALIGNMENT 0 YS2-5d01.q1k vc_4 62 428 126 125 F 367 0.00 1365 reject_low 8 ALIGNMENT 0 YS2-5d01.q1k vc_7 588 62 6412 6411 C 527 0.00 1365 reject_low 12 ALIGNMENT 0 YS2-5d01.q1k vc_4 430 429 5872 6353 F 0 0.00 1365 reject_low 9 ALIGNMENT 295 YS2-5d01.q1k chr13 55 389 416210 416544 F 335 98.21 1365 accept_chi 0 ALIGNMENT 0 YS2-5d01.q1k vc_5 62 428 2398 2397 F 367 0.00 1365 reject_low 5 ALIGNMENT 86 YS2-5d01.q1k vc_4 515 429 1448 1534 C 87 100.00 1365 reject_low 10 ALIGNMENT 0 YS2-5d01.q1k vc_2 62 428 2164 2163 F 367 0.00 1365 reject_low 3 ALIGNMENT 151 YS2-5d01.q1k vc_4 429 590 6353 6514 F 162 98.15 1365|1,0 reject_low 9 ALIGNMENT 38 YS2-5d01.q1k vc_7 392 429 63 100 F 38 100.00 1365 reject_low 17 ALIGNMENT 20 YS2-5d01.q1k vc_4 36 55 5812 5831 F 20 100.00 1365 reject_low 9 ALIGNMENT 0 YS2-5d01.q1k vc_7 62 391 13525 13524 F 330 0.00 1365 reject_low 18 ALIGNMENT 0 YS2-5d01.q1k vc_2 526 430 2106 2105 C 97 0.00 1365 reject_low 14 ALIGNMENT 223 YS2-5d01.q1k vc_5 429 760 2398 2721 F 332 91.27 1365 reject_low 5 ALIGNMENT 36 YS2-5d01.q1k vc_5 426 391 1 36 C 36 100.00 1365 reject_low 19 ALIGNMENT 0 YS2-5d01.q1k vc_5 390 56 37 2378 C 335 0.00 1365 reject_low 19 ALIGNMENT 20 YS2-5d01.q1k vc_3 55 36 2512 2531 C 20 100.00 1365 reject_low 15 ALIGNMENT 20 YS2-5d01.q1k vc_5 55 36 2379 2398 C 20 100.00 1365 reject_low 19 ALIGNMENT 151 YS2-5d01.q1k vc_4 429 590 126 287 F 162 98.15 1365 reject_low 8 ALIGNMENT 20 YS2-5d01.q1k vc_2 55 36 2145 2164 C 20 100.00 1365 reject_low 14 ALIGNMENT 0 YS2-5d01.q1k vc_4 428 62 1535 1534 C 367 0.00 1365 reject_low 10 ALIGNMENT 39 YS2-5d01.q1k vc_5 429 391 5025 5063 C 39 100.00 1365 reject_low 16 ALIGNMENT 0 YS2-5d01.q1k chr13 390 526 416544 416543 F 137 0.00 1365 accept_chi 0 ALIGNMENT 41 YS2-5d01.q1k vc_2 429 389 2105 2145 C 41 100.00 1365 reject_low 14 ALIGNMENT 0 YS2-5d01.q1k vc_5 390 62 5064 5063 C 329 0.00 1365 reject_low 16 ALIGNMENT 223 YS2-5d01.q1k vc_7 760 429 2404 2727 C 332 91.27 1365 reject_low 6 ALIGNMENT 0 YS2-5d01.q1k vc_3 62 428 2531 2530 F 367 0.00 1365 reject_low 4 ALIGNMENT 223 YS2-5d01.q1k vc_3 429 760 2531 2854 F 332 91.27 1365 reject_low 4 ALIGNMENT 0 YS2-5d01.q1k vc_5 526 430 5026 5025 C 97 0.00 1365 reject_low 16 ALIGNMENT 0 YS2-5d01.q1k vc_5 526 427 2 1 C 100 0.00 1365 reject_low 19 ALIGNMENT 0 YS2-5d01.q1k vc_2 388 56 2146 2144 C 333 0.00 1365 reject_low 14 ALIGNMENT 223 YS2-5d01.q1k vc_2 429 760 2164 2487 F 332 91.27 1365 reject_low 3 ALIGNMENT 0 YS2-5d01.q1k vc_7 430 526 13562 13561 F 97 0.00 1365 reject_low 18 ALIGNMENT 0 YS2-5d01.q1k vc_7 56 526 2746 2745 F 471 0.00 1365 reject_low 11 ALIGNMENT 20 YS2-5d01.q1k vc_1 55 36 2512 2531 C 20 100.00 1365 reject_low 13 ALIGNMENT 0 YS2-5d01.q1k vc_4 56 388 5832 5830 F 333 0.00 1365 reject_low 9 ALIGNMENT 0 YS2-5d01.q1k vc_1 388 56 2513 2511 C 333 0.00 1365 reject_low 13 ALIGNMENT 0 YS2-5d01.q1k vc_4 428 62 5813 5812 C 367 0.00 1365 reject_low 7 ALIGNMENT 260 YS2-5d01.p1k chr13 365 72 416210 416503 C 294 96.26 384 accept_chi 1 ALIGNMENT 0 YS2-5d01.q1k vc_1 62 428 2531 2530 F 367 0.00 1365 reject_low 2 ALIGNMENT 41 YS2-5d01.q1k vc_3 429 389 2472 2512 C 41 100.00 1365 reject_low 15 ALIGNMENT 39 YS2-5d01.q1k vc_7 640 589 6360 6411 C 52 92.31 1365 reject_low 12 ALIGNMENT 0 YS2-5d01.p1k chr13 384 366 416211 416210 C 19 0.00 384 accept_chi 1 ALIGNMENT 20 YS2-5d01.q1k vc_7 36 55 2727 2746 F 20 100.00 1365 reject_low 11 ALIGNMENT 41 YS2-5d01.q1k vc_1 429 389 2472 2512 C 41 100.00 1365 reject_low 13 ALIGNMENT 0 YS2-5d01.q1k vc_3 526 430 2473 2472 C 97 0.00 1365 reject_low 15 ALIGNMENT 0 YS2-5d01.q1k vc_7 430 526 100 99 F 97 0.00 1365 reject_low 17 ALIGNMENT 0 YS2-5d01.q1k vc_3 388 56 2513 2511 C 333 0.00 1365 reject_low 15 ALIGNMENT 38 YS2-5d01.q1k vc_7 392 429 13525 13562 F 38 100.00 1365 reject_low 18 ALIGNMENT 454 YS2-5d02.q1k chr12 734 7 751619 752342 C 728 88.87 1215 accept_chi 1 ALIGNMENT 932 YS2-5d02.p1k chr04 42 1104 607274 608348 F 1063 97.18 1448 accept_chi 0 ALIGNMENT 819 YS2-5d03.p1k chr13 33 1113 810934 812012 F 1081 93.52 1440 accept 0 ALIGNMENT 0 YS2-5d03.p1k chr13 847 591 54153 54152 C 257 0.00 1440 reject_low 1 ALIGNMENT 49 YS2-5d03.p1k chr13 590 368 54152 54374 C 223 73.99 1440 reject_low 1 ALIGNMENT 614 YS2-5d03.q1k chr13 826 33 814285 815075 C 794 93.70 1279 accept 0 ALIGNMENT 0 YS2-5d03.p1k chr13 367 62 54375 54374 C 306 0.00 1440 reject_low 1 ALIGNMENT 409 YS2-5d06.q1k chr12 49 656 177513 178116 F 608 89.80 1386 accept 0 ALIGNMENT 963 YS2-5d06.p1k chr12 1092 34 182257 183329 C 1059 97.73 1475 accept 0 ALIGNMENT 301 YS2-5d07.p1k vc_3 1258 835 1670 2105 C 424 91.04 1563 reject_low 4 ALIGNMENT 0 YS2-5d07.p1k vc_5 834 107 5026 5025 C 728 0.00 1563 reject_low 5 ALIGNMENT 417 YS2-5d07.q1k chr03 39 619 181732 182311 F 581 92.08 1395 accept_chi 1 ALIGNMENT 0 YS2-5d07.p1k vc_7 107 834 100 99 F 728 0.00 1563 reject_low 6 ALIGNMENT 0 YS2-5d07.p1k vc_1 905 866 2442 2441 C 40 0.00 1563 reject_low 10 ALIGNMENT 0 YS2-5d07.p1k vc_3 834 107 2473 2472 C 728 0.00 1563 reject_low 11 ALIGNMENT 279 YS2-5d07.p1k vc_4 835 1181 5871 6221 F 347 93.66 1563 reject_low 8 ALIGNMENT 0 YS2-5d07.p1k vc_3 834 107 2106 2105 C 728 0.00 1563 reject_low 4 ALIGNMENT 26 YS2-5d07.p1k vc_3 865 835 2441 2472 C 31 96.77 1563 reject_low 11 ALIGNMENT 0 YS2-5d07.p1k vc_6 107 1061 3585 3584 F 955 0.00 1563 reject_low 9 ALIGNMENT 0 YS2-5d07.p1k chr03 905 817 181729 181728 C 89 0.00 1563 accept_chi 0 ALIGNMENT 0 YS2-5d07.p1k vc_3 905 866 2442 2441 C 40 0.00 1563 reject_low 11 ALIGNMENT 301 YS2-5d07.p1k vc_5 1258 835 4590 5025 C 424 91.04 1563 reject_low 5 ALIGNMENT 0 YS2-5d07.p1k vc_4 107 834 5871 5870 F 728 0.00 1563 reject_low 8 ALIGNMENT 0 YS2-5d07.p1k vc_1 834 107 2473 2472 C 728 0.00 1563 reject_low 10 ALIGNMENT 301 YS2-5d07.p1k vc_1 1258 835 1670 2105 C 424 91.04 1563 reject_low 2 ALIGNMENT 0 YS2-5d07.p1k vc_1 834 107 2106 2105 C 728 0.00 1563 reject_low 2 ALIGNMENT 301 YS2-5d07.p1k vc_7 835 1258 100 535 F 424 91.04 1563 reject_low 6 ALIGNMENT 301 YS2-5d07.p1k vc_2 1258 835 1670 2105 C 424 91.04 1563 reject_low 3 ALIGNMENT 100 YS2-5d07.p1k vc_6 1062 1258 3585 3791 F 197 85.28 1563 reject_low 9 ALIGNMENT 0 YS2-5d07.p1k vc_2 834 107 2106 2105 C 728 0.00 1563 reject_low 3 ALIGNMENT 692 YS2-5d07.p1k chr03 816 94 181728 182450 C 723 99.72 1563 accept_chi 0 ALIGNMENT 26 YS2-5d07.p1k vc_1 865 835 2441 2472 C 31 96.77 1563 reject_low 10 ALIGNMENT 301 YS2-5d07.p1k vc_7 835 1258 13562 13997 F 424 91.04 1563 reject_low 7 ALIGNMENT 0 YS2-5d07.p1k vc_7 107 834 13562 13561 F 728 0.00 1563 reject_low 7 ALIGNMENT 638 YS2-5d08.q1k chr05 872 8 168624 169481 C 865 92.83 1296 accept 0 ALIGNMENT 953 YS2-5d08.p1k chr05 29 1132 164389 165506 F 1104 97.28 1469 accept 0 ALIGNMENT 502 YS2-5d09.q1k chr15 54 678 81847 82469 F 625 94.08 1377 accept 0 ALIGNMENT 725 YS2-5d11.q1k chr08 5 871 451366 452229 F 867 95.04 1305 accept 0 ALIGNMENT 928 YS2-5d11.p1k chr08 1096 36 455645 456718 C 1061 97.17 1445 accept 0 ALIGNMENT 590 YS2-5d11.q1k chr07 5 871 1000971 1001834 F 867 89.85 1305 reject_low 1 ALIGNMENT 255 YS2-5d12.q1k vc_3 358 754 2531 2920 F 397 89.42 1359 reject_low 3 ALIGNMENT 253 YS2-5d12.q1k vc_4 754 358 5421 5812 C 397 89.17 1359 reject_low 6 ALIGNMENT 41 YS2-5d12.q1k vc_3 358 318 2472 2512 C 41 100.00 1359 reject_low 13 ALIGNMENT 0 YS2-5d12.q1k vc_5 319 152 5064 5063 C 168 0.00 1359 reject_low 14 ALIGNMENT 70 YS2-5d12.q1k vc_7 754 574 4993 5169 C 181 81.22 1359 reject_low 10 ALIGNMENT 36 YS2-5d12.q1k vc_5 355 320 1 36 C 36 100.00 1359 reject_low 17 ALIGNMENT 142 YS2-5d12.q1k vc_4 358 519 126 287 F 162 96.30 1359 reject_low 7 ALIGNMENT 0 YS2-5d12.q1k vc_4 152 357 126 125 F 206 0.00 1359 reject_low 7 ALIGNMENT 142 YS2-5d12.q1k vc_4 358 519 6353 6514 F 162 96.30 1359|1,0 reject_low 8 ALIGNMENT 199 YS2-5d12.q1k chr14 49 317 667598 667855 F 269 94.42 1359 accept 0 ALIGNMENT 38 YS2-5d12.q1k vc_7 321 358 13525 13562 F 38 100.00 1359 reject_low 16 ALIGNMENT 0 YS2-5d12.q1k vc_2 317 152 2146 2145 C 166 0.00 1359 reject_low 12 ALIGNMENT 0 YS2-5d12.q1k vc_4 357 152 1535 1534 C 206 0.00 1359 reject_low 9 ALIGNMENT 38 YS2-5d12.q1k vc_7 321 358 63 100 F 38 100.00 1359 reject_low 15 ALIGNMENT 0 YS2-5d12.q1k chr14 318 348 667855 667854 F 31 0.00 1359 accept 0 ALIGNMENT 0 YS2-5d12.q1k vc_1 152 357 2531 2530 F 206 0.00 1359 reject_low 1 ALIGNMENT 39 YS2-5d12.q1k vc_5 358 320 5025 5063 C 39 100.00 1359 reject_low 14 ALIGNMENT 85 YS2-5d12.q1k vc_4 446 358 1446 1534 C 89 98.88 1359 reject_low 9 ALIGNMENT 0 YS2-5d12.q1k vc_7 573 572 5170 6359 C 2 0.00 1359 reject_low 10 ALIGNMENT 0 YS2-5d12.q1k vc_7 517 152 6412 6411 C 366 0.00 1359 reject_low 10 ALIGNMENT 43 YS2-5d12.q1k vc_7 571 518 6360 6411 C 54 96.30 1359 reject_low 10 ALIGNMENT 0 YS2-5d12.q1k vc_4 152 317 5831 5830 F 166 0.00 1359 reject_low 8 ALIGNMENT 0 YS2-5d12.q1k vc_4 359 358 5872 6353 F 0 0.00 1359 reject_low 8 ALIGNMENT 0 YS2-5d12.q1k vc_2 152 357 2164 2163 F 206 0.00 1359 reject_low 2 ALIGNMENT 255 YS2-5d12.q1k vc_2 358 754 2164 2553 F 397 89.42 1359 reject_low 2 ALIGNMENT 41 YS2-5d12.q1k vc_1 358 318 2472 2512 C 41 100.00 1359 reject_low 11 ALIGNMENT 0 YS2-5d12.q1k vc_5 319 152 37 36 C 168 0.00 1359 reject_low 17 ALIGNMENT 255 YS2-5d12.q1k vc_1 358 754 2531 2920 F 397 89.42 1359 reject_low 1 ALIGNMENT 0 YS2-5d12.q1k vc_3 317 152 2513 2512 C 166 0.00 1359 reject_low 13 ALIGNMENT 41 YS2-5d12.q1k vc_2 358 318 2105 2145 C 41 100.00 1359 reject_low 12 ALIGNMENT 0 YS2-5d12.q1k vc_4 357 152 5813 5812 C 206 0.00 1359 reject_low 6 ALIGNMENT 0 YS2-5d12.q1k vc_1 317 152 2513 2512 C 166 0.00 1359 reject_low 11 ALIGNMENT 0 YS2-5d12.q1k vc_3 152 357 2531 2530 F 206 0.00 1359 reject_low 3 ALIGNMENT 255 YS2-5d12.q1k vc_7 754 358 2338 2727 C 397 89.42 1359 reject_low 5 ALIGNMENT 0 YS2-5d12.q1k vc_7 152 320 63 62 F 169 0.00 1359 reject_low 15 ALIGNMENT 255 YS2-5d12.q1k vc_5 358 754 2398 2787 F 397 89.42 1359 reject_low 4 ALIGNMENT 0 YS2-5d12.q1k vc_5 152 357 2398 2397 F 206 0.00 1359 reject_low 4 ALIGNMENT 0 YS2-5d12.q1k vc_7 152 320 13525 13524 F 169 0.00 1359 reject_low 16 ALIGNMENT 0 YS2-5d12.q1k vc_7 357 152 2728 2727 C 206 0.00 1359 reject_low 5 ALIGNMENT 41 YS2-5d12.q1k vc_4 318 358 5831 5871 F 41 100.00 1359 reject_low 8 ALIGNMENT 634 YS2-5d13.p1k chr03 946 36 228205 229109 C 911 90.78 1445 accept 0 ALIGNMENT 1036 YS2-5d14.p1k chr14 35 1192 774874 776037 F 1158 96.98 1505 reject_low 1 ALIGNMENT 1035 YS2-5d14.p1k chr05 1227 35 19811 21015 C 1193 96.23 1505 accept 0 ALIGNMENT 630 YS2-5d14.q1k chr05 50 810 16522 17274 F 761 95.40 1484 accept 0 ALIGNMENT 872 YS2-5d15.p1k chr08 28 1002 118086 119075 F 975 97.33 1404 accept 0 ALIGNMENT 581 YS2-5d15.q1k chr08 779 3 119714 120489 C 777 92.66 1178 accept 0 ALIGNMENT 488 YS2-5d16.q1k chr11 52 643 252980 253570 F 592 95.27 1475 accept_chi 1 ALIGNMENT 527 YS2-5d16.p1k chr11 621 66 252980 253535 C 556 99.46 640 accept_chi 0 ALIGNMENT 0 YS2-5d16.p1k chr11 640 622 252981 252980 C 19 0.00 640 accept_chi 0 ALIGNMENT 540 YS2-5d17.q1k chr05 664 3 536144 536804 C 662 94.71 1267 accept 0 ALIGNMENT 927 YS2-5d17.p1k chr05 73 1170 535098 536205 F 1098 96.54 1465 accept 0 ALIGNMENT 652 YS2-5d18.q1k chr13 893 30 406331 407183 C 864 93.17 1370 accept 0 ALIGNMENT 959 YS2-5d18.p1k chr13 32 1164 403516 404667 F 1133 96.82 1467 accept 0 ALIGNMENT 0 YS2-5d21.q1k chr02 139 122 780408 780407 C 18 0.00 1349 reject_low 2 ALIGNMENT 374 YS2-5d21.q1k chr08 49 555 372795 373298 F 507 92.90 1349 accept_chi 1 ALIGNMENT 0 YS2-5d21.q1k chr05 177 357 83190 83189 F 181 0.00 1349 reject_low 5 ALIGNMENT 0 YS2-5d21.q1k chr04 357 169 747525 747524 C 189 0.00 1349 reject_low 7 ALIGNMENT 28 YS2-5d21.q1k chr07 169 139 158864 158894 C 31 100.00 1349 reject_low 4 ALIGNMENT 0 YS2-5d21.q1k chr04 139 122 747553 747552 C 18 0.00 1349 reject_low 7 ALIGNMENT 20 YS2-5d21.q1k chr12 140 165 329740 329765 F 26 100.00 1349 reject_low 8 ALIGNMENT 395 YS2-5d21.p1k chr08 542 72 372795 373265 C 471 96.18 560 accept_chi 0 ALIGNMENT 26 YS2-5d21.q1k chr02 176 140 780371 780407 C 37 94.59 1349 reject_low 2 ALIGNMENT 0 YS2-5d21.q1k chr02 357 177 780372 780371 C 181 0.00 1349 reject_low 2 ALIGNMENT 0 YS2-5d21.q1k chr16 168 357 185402 185401 F 190 0.00 1349 reject_low 3 ALIGNMENT 0 YS2-5d21.q1k chr13 141 122 354601 354600 C 20 0.00 1349 reject_low 6 ALIGNMENT 0 YS2-5d21.q1k chr12 166 357 329765 329764 F 192 0.00 1349 reject_low 8 ALIGNMENT 0 YS2-5d21.q1k chr12 122 139 329740 329739 F 18 0.00 1349 reject_low 8 ALIGNMENT 22 YS2-5d21.q1k chr04 168 140 747524 747552 C 29 100.00 1349 reject_low 7 ALIGNMENT 20 YS2-5d21.q1k chr13 176 142 354566 354600 C 35 91.43 1349 reject_low 6 ALIGNMENT 0 YS2-5d21.p1k chr08 560 543 372796 372795 C 18 0.00 560 accept_chi 0 ALIGNMENT 0 YS2-5d21.q1k chr07 138 122 158895 158894 C 17 0.00 1349 reject_low 4 ALIGNMENT 0 YS2-5d21.q1k chr05 122 141 83156 83155 F 20 0.00 1349 reject_low 5 ALIGNMENT 20 YS2-5d21.q1k chr05 142 176 83156 83190 F 35 91.43 1349 reject_low 5 ALIGNMENT 22 YS2-5d21.q1k chr16 133 167 185368 185402 F 35 91.43 1349 reject_low 3 ALIGNMENT 0 YS2-5d21.q1k chr13 357 177 354567 354566 C 181 0.00 1349 reject_low 6 ALIGNMENT 0 YS2-5d21.q1k chr07 357 170 158865 158864 C 188 0.00 1349 reject_low 4 ALIGNMENT 652 YS2-5d22.q1k chr07 45 885 957470 958308 F 841 94.65 1246 accept 0 ALIGNMENT 0 YS2-5d22.q1k chr13 93 524 587738 587737 F 432 0.00 1246 reject_low 2 ALIGNMENT 0 YS2-5d22.q1k chr13 74 524 169496 169495 F 451 0.00 1246 reject_low 3 ALIGNMENT 22 YS2-5d22.q1k chr13 42 92 587688 587738 F 51 94.12 1246 reject_low 2 ALIGNMENT 21 YS2-5d22.q1k chr13 41 73 169464 169496 F 33 100.00 1246 reject_low 3 ALIGNMENT 28 YS2-5d22.q1k chr04 42 124 390427 390509 F 83 89.16 1246 reject_low 1 ALIGNMENT 1042 YS2-5d22.p1k chr07 1240 34 960859 962077 C 1207 96.44 1428 accept 0 ALIGNMENT 0 YS2-5d22.q1k chr04 125 524 390509 390508 F 400 0.00 1246 reject_low 1 ALIGNMENT 679 YS2-5d23.q1k chr08 1 800 462692 463486 F 800 95.75 1091 accept 0 ALIGNMENT 0 YS2-5d23.p1k chr04 1007 62 651496 651495 C 946 0.00 1359 reject_low 4 ALIGNMENT 0 YS2-5d23.p1k chr07 918 62 1004294 1004293 C 857 0.00 1359 reject_low 2 ALIGNMENT 43 YS2-5d23.p1k chr04 1064 1008 651439 651495 C 57 94.74 1359 reject_low 4 ALIGNMENT 53 YS2-5d23.p1k chr07 989 918 661753 661825 C 72 93.06 1359 reject_low 1 ALIGNMENT 0 YS2-5d23.p1k chr07 917 62 661826 661825 C 856 0.00 1359 reject_low 1 ALIGNMENT 44 YS2-5d23.p1k chr07 1064 1004 319706 319766 C 61 93.44 1359 reject_low 3 ALIGNMENT 43 YS2-5d23.p1k chr04 1008 1064 1023134 1023190 F 57 94.74 1359 reject_low 5 ALIGNMENT 957 YS2-5d23.p1k chr08 1175 38 466795 467943 C 1138 96.31 1359 accept 0 ALIGNMENT 52 YS2-5d23.p1k chr07 989 919 1004222 1004293 C 71 92.96 1359 reject_low 2 ALIGNMENT 0 YS2-5d23.p1k chr07 1003 62 319767 319766 C 942 0.00 1359 reject_low 3 ALIGNMENT 0 YS2-5d23.p1k chr04 62 1007 1023134 1023133 F 946 0.00 1359 reject_low 5 ALIGNMENT 0 YS2-5d24.q1k vc_4 197 372 126 125 F 176 0.00 1359 reject_low 8 ALIGNMENT 313 YS2-5d24.q1k vc_5 373 808 2398 2830 F 436 91.28 1359 reject_low 5 ALIGNMENT 0 YS2-5d24.q1k vc_3 197 372 2531 2530 F 176 0.00 1359 reject_low 4 ALIGNMENT 38 YS2-5d24.q1k vc_7 336 373 13525 13562 F 38 100.00 1359 reject_low 16 ALIGNMENT 0 YS2-5d24.q1k vc_7 532 197 6412 6411 C 336 0.00 1359 reject_low 10 ALIGNMENT 0 YS2-5d24.q1k vc_1 197 372 2531 2530 F 176 0.00 1359 reject_low 2 ALIGNMENT 148 YS2-5d24.q1k vc_4 373 534 6353 6514 F 162 97.53 1359|1,0 reject_low 9 ALIGNMENT 0 YS2-5d24.q1k vc_4 372 197 5813 5812 C 176 0.00 1359 reject_low 6 ALIGNMENT 0 YS2-5d24.q1k vc_4 197 332 5831 5830 F 136 0.00 1359 reject_low 9 ALIGNMENT 117 YS2-5d24.q1k vc_7 808 583 4950 5172 C 226 84.96 1359|0,1 reject_low 10 ALIGNMENT 176 YS2-5d24.q1k chr15 90 332 1052396 1052628 F 243 93.42 1359 accept_chi 1 ALIGNMENT 0 YS2-5d24.q1k vc_3 332 197 2513 2512 C 136 0.00 1359 reject_low 14 ALIGNMENT 41 YS2-5d24.q1k vc_3 373 333 2472 2512 C 41 100.00 1359 reject_low 14 ALIGNMENT 0 YS2-5d24.q1k vc_4 374 373 5872 6353 F 0 0.00 1359 reject_low 9 ALIGNMENT 313 YS2-5d24.q1k vc_3 373 808 2531 2963 F 436 91.28 1359 reject_low 4 ALIGNMENT 0 YS2-5d24.q1k vc_2 332 197 2146 2145 C 136 0.00 1359 reject_low 13 ALIGNMENT 148 YS2-5d24.q1k vc_4 373 534 126 287 F 162 97.53 1359 reject_low 8 ALIGNMENT 82 YS2-5d24.q1k vc_4 459 373 1448 1534 C 87 98.85 1359 reject_low 11 ALIGNMENT 0 YS2-5d24.q1k chr15 333 581 1052628 1052627 F 249 0.00 1359 accept_chi 1 ALIGNMENT 41 YS2-5d24.q1k vc_4 333 373 5831 5871 F 41 100.00 1359 reject_low 9 ALIGNMENT 0 YS2-5d24.q1k vc_3 581 374 2473 2472 C 208 0.00 1359 reject_low 14 ALIGNMENT 0 YS2-5d24.q1k vc_1 332 197 2513 2512 C 136 0.00 1359 reject_low 12 ALIGNMENT 0 YS2-5d24.q1k vc_5 581 371 2 1 C 211 0.00 1359 reject_low 17 ALIGNMENT 0 YS2-5d24.q1k vc_5 334 197 5064 5063 C 138 0.00 1359 reject_low 15 ALIGNMENT 0 YS2-5d24.q1k vc_7 374 581 13562 13561 F 208 0.00 1359 reject_low 16 ALIGNMENT 313 YS2-5d24.q1k vc_1 373 808 2531 2963 F 436 91.28 1359 reject_low 2 ALIGNMENT 0 YS2-5d24.q1k vc_2 197 372 2164 2163 F 176 0.00 1359 reject_low 3 ALIGNMENT 0 YS2-5d24.q1k vc_4 581 460 1449 1448 C 122 0.00 1359 reject_low 11 ALIGNMENT 41 YS2-5d24.q1k vc_2 373 333 2105 2145 C 41 100.00 1359 reject_low 13 ALIGNMENT 0 YS2-5d24.q1k vc_7 583 584 5172 6360 C 0 0.00 1359 reject_low 10 ALIGNMENT 39 YS2-5d24.q1k vc_5 373 335 5025 5063 C 39 100.00 1359 reject_low 15 ALIGNMENT 0 YS2-5d24.q1k vc_5 581 374 5026 5025 C 208 0.00 1359 reject_low 15 ALIGNMENT 0 YS2-5d24.q1k vc_4 372 197 1535 1534 C 176 0.00 1359 reject_low 11 ALIGNMENT 36 YS2-5d24.q1k vc_5 370 335 1 36 C 36 100.00 1359 reject_low 17 ALIGNMENT 0 YS2-5d24.q1k vc_7 372 197 2728 2727 C 176 0.00 1359 reject_low 7 ALIGNMENT 212 YS2-5d24.p1k chr15 276 46 1052386 1052616 C 231 97.40 294 accept_chi 0 ALIGNMENT 0 YS2-5d24.q1k vc_5 334 197 37 36 C 138 0.00 1359 reject_low 17 ALIGNMENT 41 YS2-5d24.q1k vc_1 373 333 2472 2512 C 41 100.00 1359 reject_low 12 ALIGNMENT 313 YS2-5d24.q1k vc_2 373 808 2164 2596 F 436 91.28 1359 reject_low 3 ALIGNMENT 0 YS2-5d24.q1k vc_5 197 372 2398 2397 F 176 0.00 1359 reject_low 5 ALIGNMENT 0 YS2-5d24.q1k vc_4 535 581 287 286 F 47 0.00 1359 reject_low 8 ALIGNMENT 0 YS2-5d24.q1k vc_2 581 374 2106 2105 C 208 0.00 1359 reject_low 13 ALIGNMENT 304 YS2-5d24.q1k vc_7 791 373 2312 2727 C 419 91.65 1359 reject_low 7 ALIGNMENT 0 YS2-5d24.p1k chr15 294 277 1052387 1052386 C 18 0.00 294 accept_chi 0 ALIGNMENT 0 YS2-5d24.q1k vc_1 581 374 2473 2472 C 208 0.00 1359 reject_low 12 ALIGNMENT 0 YS2-5d24.q1k vc_7 197 335 13525 13524 F 139 0.00 1359 reject_low 16 ALIGNMENT 0 YS2-5d24.q1k vc_4 535 581 6514 6513 F 47 0.00 1359 reject_low 9 ALIGNMENT 48 YS2-5d24.q1k vc_7 584 533 6360 6411 C 52 98.08 1359|1,0 reject_low 10 ALIGNMENT 305 YS2-5d24.q1k vc_4 808 373 5378 5812 C 436 90.83 1359 reject_low 6 ALIGNMENT 525 YS2-5e02.p1k chr15 632 68 960447 961010 C 565 99.65 651 accept_chi 0 ALIGNMENT 0 YS2-5e02.p1k chr15 651 633 960448 960447 C 19 0.00 651 accept_chi 0 ALIGNMENT 460 YS2-5e02.q1k chr15 1 579 960459 961038 F 579 94.99 1261 accept_chi 1 ALIGNMENT 382 YS2-5e03.q1k chr06 77 697 83067 83683 F 621 88.89 1355 accept_chi 1 ALIGNMENT 640 YS2-5e03.p1k chr06 730 30 83022 83724 C 701 98.15 730 accept_chi 0 ALIGNMENT 0 YS2-5e04.p1k chr04 398 414 1137609 1137608 F 17 0.00 414 accept_chi 1 ALIGNMENT 65 YS2-5e04.q1k vc_4 637 465 5643 5812 C 173 80.35 1427 reject_low 2 ALIGNMENT 307 YS2-5e04.q1k chr04 423 54 1137239 1137607 C 370 95.68 1427 accept_chi 0 ALIGNMENT 0 YS2-5e04.q1k vc_4 212 464 6353 6352 F 253 0.00 1427 reject_low 4 ALIGNMENT 0 YS2-5e04.q1k vc_4 212 464 126 125 F 253 0.00 1427 reject_low 3 ALIGNMENT 60 YS2-5e04.q1k vc_4 465 618 126 276 F 154 81.17 1427 reject_low 3 ALIGNMENT 0 YS2-5e04.q1k vc_4 464 212 5813 5812 C 253 0.00 1427 reject_low 2 ALIGNMENT 49 YS2-5e04.q1k vc_4 558 465 1442 1534 C 94 85.11 1427 reject_low 5 ALIGNMENT 60 YS2-5e04.q1k vc_4 465 618 6353 6503 F 154 81.17 1427 reject_low 4 ALIGNMENT 301 YS2-5e04.p1k chr04 66 397 1137279 1137609 F 332 98.49 414 accept_chi 1 ALIGNMENT 0 YS2-5e04.q1k vc_4 464 212 1535 1534 C 253 0.00 1427 reject_low 5 ALIGNMENT 868 YS2-5e05.p1k chr15 65 1042 568522 569513 F 978 97.65 1323 accept 0 ALIGNMENT 491 YS2-5e05.q1k chr15 723 53 572134 572798 C 671 92.70 1342 accept 0 ALIGNMENT 445 YS2-5e07.q1k chr15 735 56 675191 675858 C 680 91.18 1353 accept 0 ALIGNMENT 981 YS2-5e07.p1k chr15 34 1286 674174 675441 F 1253 94.41 1463 accept 0 ALIGNMENT 780 YS2-5e08.p1k chr15 893 72 823127 823947 C 822 99.15 894 accept_chi 0 ALIGNMENT 379 YS2-5e08.q1k chr15 39 522 823134 823619 F 484 94.42 1470 accept_chi 1 ALIGNMENT 1048 YS2-5e09.p1k chr15 1216 29 929828 931022 C 1188 97.05 1444 accept 0 ALIGNMENT 615 YS2-5e09.q1k chr15 32 779 929360 930104 F 748 95.19 1292 accept 0 ALIGNMENT 713 YS2-5e10.q1k chr07 24 900 1058081 1058948 F 877 94.75 1423 accept 0 ALIGNMENT 879 YS2-5e10.p1k chr07 1152 38 1063229 1064351 C 1115 94.80 1460 accept 0 ALIGNMENT 100 YS2-5e11.q1k chr09 280 22 430454 430714 C 259 80.31 1288 reject_low 1 ALIGNMENT 0 YS2-5e11.q1k chr09 491 281 430455 430454 C 211 0.00 1288 reject_low 1 ALIGNMENT 513 YS2-5e11.q1k chr07 30 842 9676 10478 F 813 90.04 1288 accept 0 ALIGNMENT 1023 YS2-5e11.p1k chr07 1237 35 13289 14502 C 1203 96.01 1404 accept 0 ALIGNMENT 916 YS2-5e12.p1k chr05 1106 33 273939 275020 C 1074 96.55 1404 accept 0 ALIGNMENT 788 YS2-5e12.q1k chr05 30 961 273354 274281 F 932 96.24 1314 accept 0 ALIGNMENT 375 YS2-5e13.q1k chr13 46 603 87823 88376 F 558 91.40 1334 accept_chi 1 ALIGNMENT 995 YS2-5e13.p1k chr02 62 1187 663240 664377 F 1126 96.71 1414 accept_chi 0 ALIGNMENT 0 YS2-5e14.q1k chr07 81 62 834 833 C 20 0.00 1318 reject_low 8 ALIGNMENT 20 YS2-5e14.q1k chr08 475 438 5135 5171 C 38 89.47 1318 reject_low 12 ALIGNMENT 205 YS2-5e14.q1k chr16 437 82 6917 7275 C 356 88.48 1318 reject_low 21 ALIGNMENT 0 YS2-5e14.q1k chr10 437 438 7437 7462 C 0 0.00 1318 reject_low 17 ALIGNMENT 293 YS2-5e14.q1k chr08 436 3 5199 5634 C 434 91.71 1318 reject_low 12 ALIGNMENT 230 YS2-5e14.q1k chr04 82 437 1524556 1524913 F 356 90.73 1318 reject_low 19 ALIGNMENT 0 YS2-5e14.q1k chr11 438 483 665847 665846 F 46 0.00 1318 reject_low 6 ALIGNMENT 0 YS2-5e14.q1k chr15 81 62 899 898 C 20 0.00 1318 reject_low 4 ALIGNMENT 0 YS2-5e14.q1k chr10 81 62 7820 7819 C 20 0.00 1318 reject_low 17 ALIGNMENT 244 YS2-5e14.q1k chr15 437 82 543 898 C 356 92.13 1318 reject_low 4 ALIGNMENT 0 YS2-5e14.q1k chr03 438 483 316084 316083 F 46 0.00 1318 reject_low 5 ALIGNMENT 0 YS2-5e14.q1k chr07 438 447 1083946 1083975 F 10 0.00 1318 reject_low 13 ALIGNMENT 0 YS2-5e14.q1k chr03 437 413 773 818 C 25 0.00 1318 reject_low 18 ALIGNMENT 0 YS2-5e14.q1k chr04 438 437 1524914 1524939 F 0 0.00 1318 reject_low 19 ALIGNMENT 0 YS2-5e14.q1k chr04 437 437 577 599 C 1 0.00 1318 reject_low 16 ALIGNMENT 180 YS2-5e14.q1k chr12 412 82 11806 12137 C 331 87.31 1318 reject_low 10 ALIGNMENT 0 YS2-5e14.q1k chr01 81 62 854 853 C 20 0.00 1318 reject_low 20 ALIGNMENT 265 YS2-5e14.q1k chr10 4 412 744689 745096 F 409 90.71 1318 reject_low 2 ALIGNMENT 20 YS2-5e14.q1k chr04 438 475 1524940 1524976 F 38 86.84 1318 reject_low 19 ALIGNMENT 20 YS2-5e14.q1k chr16 475 448 6860 6886 C 28 92.86 1318 reject_low 21 ALIGNMENT 196 YS2-5e14.q1k chr07 431 82 482 833 C 350 88.00 1318 reject_low 8 ALIGNMENT 0 YS2-5e14.q1k chr05 62 81 569543 569542 F 20 0.00 1318 reject_low 3 ALIGNMENT 0 YS2-5e14.q1k chr11 62 135 665545 665544 F 74 0.00 1318 reject_low 6 ALIGNMENT 0 YS2-5e14.q1k chr15 483 438 544 543 C 46 0.00 1318 reject_low 4 ALIGNMENT 0 YS2-5e14.q1k chr12 62 81 1064226 1064225 F 20 0.00 1318 reject_low 7 ALIGNMENT 0 YS2-5e14.q1k chr12 81 62 12138 12137 C 20 0.00 1318 reject_low 10 ALIGNMENT 204 YS2-5e14.q1k chr11 136 437 665545 665847 F 302 91.72 1318 reject_low 6 ALIGNMENT 23 YS2-5e14.q1k chr01 475 438 432 468 C 38 89.47 1318 reject_low 20 ALIGNMENT 0 YS2-5e14.q1k chr10 413 483 745096 745095 F 71 0.00 1318 reject_low 2 ALIGNMENT 0 YS2-5e14.q1k chr02 62 476 793568 793567 F 415 0.00 1318 accept_tel 0 ALIGNMENT 0 YS2-5e14.q1k chr02 437 437 812678 812700 F 1 0.00 1318 reject_low 14 ALIGNMENT 23 YS2-5e14.q1k chr13 475 438 5980 6016 C 38 89.47 1318 reject_low 15 ALIGNMENT 0 YS2-5e14.q1k chr14 437 483 783583 783582 F 47 0.00 1318 reject_low 9 ALIGNMENT 268 YS2-5e14.q1k chr04 436 4 600 1032 C 433 89.84 1318 reject_low 16 ALIGNMENT 23 YS2-5e14.q1k chr07 448 475 1083976 1084002 F 28 96.43 1318 reject_low 13 ALIGNMENT 271 YS2-5e14.q1k chr13 436 4 6040 6472 C 433 90.07 1318 reject_low 15 ALIGNMENT 216 YS2-5e14.q1k chr10 437 82 7463 7819 C 356 89.33 1318 reject_low 17 ALIGNMENT 269 YS2-5e14.q1k chr06 437 3 5225 5660 C 435 89.66 1318 reject_low 1 ALIGNMENT 24 YS2-5e14.q1k chr14 475 438 7060 7095 C 38 92.11 1318 reject_low 11 ALIGNMENT 0 YS2-5e14.q1k chr14 62 81 783226 783225 F 20 0.00 1318 reject_low 9 ALIGNMENT 0 YS2-5e14.q1k chr07 483 432 483 482 C 52 0.00 1318 reject_low 8 ALIGNMENT 0 YS2-5e14.q1k chr16 447 438 6887 6916 C 10 0.00 1318 reject_low 21 ALIGNMENT 0 YS2-5e14.q1k chr12 483 413 11807 11806 C 71 0.00 1318 reject_low 10 ALIGNMENT 0 YS2-5e14.q1k chr06 483 438 5226 5225 C 46 0.00 1318 reject_low 1 ALIGNMENT 0 YS2-5e14.q1k chr14 437 438 7096 7121 C 0 0.00 1318 reject_low 11 ALIGNMENT 196 YS2-5e14.q1k chr01 437 82 495 853 C 356 87.64 1318 reject_low 20 ALIGNMENT 202 YS2-5e14.q1k chr12 82 437 1064226 1064584 F 356 88.20 1318 reject_low 7 ALIGNMENT 218 YS2-5e14.q1k chr03 82 437 315727 316084 F 356 89.61 1318 reject_low 5 ALIGNMENT 23 YS2-5e14.q1k chr03 475 438 736 772 C 38 89.47 1318 reject_low 18 ALIGNMENT 0 YS2-5e14.q1k chr08 437 437 5172 5198 C 1 0.00 1318 reject_low 12 ALIGNMENT 23 YS2-5e14.q1k chr02 438 475 812701 812737 F 38 89.47 1318 reject_low 14 ALIGNMENT 0 YS2-5e14.q1k chr13 437 437 6017 6039 C 1 0.00 1318 reject_low 15 ALIGNMENT 293 YS2-5e14.q1k chr14 437 4 7122 7556 C 434 91.71 1318 reject_low 11 ALIGNMENT 0 YS2-5e14.q1k chr12 438 483 1064584 1064583 F 46 0.00 1318 reject_low 7 ALIGNMENT 0 YS2-5e14.q1k chr03 81 62 1150 1149 C 20 0.00 1318 reject_low 18 ALIGNMENT 0 YS2-5e14.q1k chr04 62 81 1524556 1524555 F 20 0.00 1318 reject_low 19 ALIGNMENT 246 YS2-5e14.q1k chr05 82 437 569543 569899 F 356 92.13 1318 reject_low 3 ALIGNMENT 0 YS2-5e14.q1k chr16 81 62 7276 7275 C 20 0.00 1318 reject_low 21 ALIGNMENT 0 YS2-5e14.q1k chr01 437 438 469 494 C 0 0.00 1318 reject_low 20 ALIGNMENT 223 YS2-5e14.q1k chr03 412 82 819 1149 C 331 91.54 1318 reject_low 18 ALIGNMENT 194 YS2-5e14.q1k chr14 82 436 783226 783583 F 355 87.61 1318 reject_low 9 ALIGNMENT 23 YS2-5e14.q1k chr04 475 438 540 576 C 38 89.47 1318 reject_low 16 ALIGNMENT 271 YS2-5e14.q1k chr02 4 436 812245 812677 F 433 90.07 1318 reject_low 14 ALIGNMENT 282 YS2-5e14.q1k chr07 3 437 1083511 1083945 F 435 90.80 1318 reject_low 13 ALIGNMENT 0 YS2-5e14.q1k chr05 438 483 569899 569898 F 46 0.00 1318 reject_low 3 ALIGNMENT 24 YS2-5e14.q1k chr10 475 438 7401 7436 C 38 92.11 1318 reject_low 17 ALIGNMENT 48 YS2-5e14.q1k chr02 477 653 793568 793740 F 177 77.97 1318 accept_tel 0 ALIGNMENT 0 YS2-5e14.q1k chr03 62 81 315727 315726 F 20 0.00 1318 reject_low 5 ALIGNMENT 458 YS2-5e15.p1k chr09 670 34 37323 37959 C 637 91.05 1399 reject_bad_break 1 ALIGNMENT 0 YS2-5e15.p1k chr09 879 748 37238 37237 C 132 0.00 1399 reject_bad_break 1 ALIGNMENT 0 YS2-5e15.p1k chr09 672 671 37307 37322 C 2 0.00 1399 reject_bad_break 1 ALIGNMENT 554 YS2-5e15.q1k chr13 789 40 8801 9547 C 750 93.07 1315 accept_tel 0 ALIGNMENT 32 YS2-5e15.p1k chr09 747 673 37237 37306 C 75 88.00 1399 reject_bad_break 1 ALIGNMENT 935 YS2-5e17.p1k chr13 1092 32 394409 395482 C 1061 97.64 1356 accept 0 ALIGNMENT 597 YS2-5e17.q1k chr13 24 761 390728 391459 F 738 95.12 1268 accept 0 ALIGNMENT 708 YS2-5e18.q1k chr14 33 843 186181 186987 F 811 96.67 1324 accept_chi 1 ALIGNMENT 967 YS2-5e18.p1k chr14 1034 31 186181 187184 C 1004 99.20 1513 accept_chi 0 ALIGNMENT 536 YS2-5e19.q1k chr02 664 38 366720 367345 C 627 96.33 1303 accept 0 ALIGNMENT 965 YS2-5e19.p1k chr02 36 1181 361363 362525 F 1146 96.16 1397 accept 0 ALIGNMENT 0 YS2-5e20.q1k chr06 62 214 12530 12529 F 153 0.00 1300 reject_low 2 ALIGNMENT 515 YS2-5e20.q1k chr14 215 981 14433 15197 F 767 90.35 1300 reject_low 3 ALIGNMENT 676 YS2-5e20.q1k chr04 117 949 15707 16541 F 833 94.60 1300 reject_low 1 ALIGNMENT 0 YS2-5e20.q1k chr04 62 116 15707 15706 F 55 0.00 1300 reject_low 1 ALIGNMENT 934 YS2-5e20.p1k chr14 1125 32 14713 15823 C 1094 95.61 1408 reject_low 3 ALIGNMENT 0 YS2-5e20.q1k chr10 116 62 730009 730008 C 55 0.00 1300 accept_tel 0 ALIGNMENT 946 YS2-5e20.p1k chr06 1125 32 12810 13920 C 1094 95.98 1408 reject_low 2 ALIGNMENT 680 YS2-5e20.q1k chr10 981 117 729146 730008 C 865 93.99 1300 accept_tel 0 ALIGNMENT 916 YS2-5e20.p1k chr10 32 1089 728520 729588 F 1058 95.84 1408 accept_tel 0 ALIGNMENT 895 YS2-5e20.p1k chr04 1089 32 16127 17195 C 1058 95.18 1408 reject_low 1 ALIGNMENT 515 YS2-5e20.q1k chr06 215 981 12530 13294 F 767 90.35 1300 reject_low 2 ALIGNMENT 0 YS2-5e20.q1k chr14 62 214 14433 14432 F 153 0.00 1300 reject_low 3 ALIGNMENT 962 YS2-5e21.p1k chr03 1180 34 126467 127618 C 1147 95.82 1359 accept 0 ALIGNMENT 435 YS2-5e21.q1k chr03 24 601 121864 122434 F 578 93.25 1249 accept 0 ALIGNMENT 943 YS2-5e22.p1k chr05 1192 39 273843 275011 C 1154 95.49 1409 accept 0 ALIGNMENT 470 YS2-5e22.q1k chr05 50 651 273355 273951 F 602 94.19 1345 accept 0 ALIGNMENT 577 YS2-5e23.q1k chr13 761 26 550695 551431 C 736 93.89 1211 accept 0 ALIGNMENT 959 YS2-5e23.p1k chr13 34 1127 547974 549078 F 1094 96.89 1291 accept 0 ALIGNMENT 384 YS2-5e24.q1k chr13 581 1 787106 787684 C 581 89.67 1175 accept_chi 1 ALIGNMENT 0 YS2-5e24.p1k chr13 620 638 787691 787690 F 19 0.00 638 accept_chi 0 ALIGNMENT 562 YS2-5e24.p1k chr13 34 619 787106 787691 F 586 99.32 638 accept_chi 0 ALIGNMENT 229 YS2-5f01.p1k chr13 29 275 580546 580794 F 247 99.19 293 accept 0 ALIGNMENT 0 YS2-5f01.p1k chr13 276 293 580794 580793 F 18 0.00 293 accept 0 ALIGNMENT 604 YS2-5f03.q1k chr14 86 909 196168 196987 F 824 91.50 1326 accept 0 ALIGNMENT 947 YS2-5f03.p1k chr14 1061 32 199422 200457 C 1030 97.77 1405 accept 0 ALIGNMENT 565 YS2-5f04.q1k chr15 25 890 223971 224838 F 866 89.49 1286 accept 0 ALIGNMENT 159 YS2-5f04.p1k chr16 1100 497 54789 55392 C 604 77.98 1477 reject_low 1 ALIGNMENT 0 YS2-5f04.p1k chr10 132 62 396714 396713 C 71 0.00 1477 reject_low 19 ALIGNMENT 20 YS2-5f04.p1k chr01 62 38 182677 182701 C 25 100.00 1477 reject_low 6 ALIGNMENT 0 YS2-5f04.p1k chr07 914 63 712274 712273 C 852 0.00 1477 reject_low 9 ALIGNMENT 0 YS2-5f04.p1k chr06 132 62 181038 181037 C 71 0.00 1477 reject_low 18 ALIGNMENT 0 YS2-5f04.p1k chr03 914 213 142691 142690 C 702 0.00 1477 reject_low 11 ALIGNMENT 0 YS2-5f04.p1k chr16 62 133 572266 572265 F 72 0.00 1477 reject_low 15 ALIGNMENT 0 YS2-5f04.p1k chr04 62 132 83548 83547 F 71 0.00 1477 reject_low 16 ALIGNMENT 0 YS2-5f04.p1k chr03 132 62 142770 142769 C 71 0.00 1477 reject_low 11 ALIGNMENT 0 YS2-5f04.p1k chr02 914 223 197617 197616 C 692 0.00 1477 reject_low 3 ALIGNMENT 0 YS2-5f04.p1k chr07 213 914 845732 845731 F 702 0.00 1477 reject_low 12 ALIGNMENT 0 YS2-5f04.p1k chr10 914 205 396643 396642 C 710 0.00 1477 reject_low 19 ALIGNMENT 74 YS2-5f04.p1k chr03 212 133 142690 142769 C 80 97.50 1477 reject_low 11 ALIGNMENT 84 YS2-5f04.p1k chr02 222 38 197616 197804 C 185 84.86 1477 reject_low 3 ALIGNMENT 74 YS2-5f04.p1k chr07 133 212 845653 845732 F 80 97.50 1477 reject_low 12 ALIGNMENT 989 YS2-5f04.p1k chr15 1137 38 225669 226775 C 1100 97.73 1477 accept 0 ALIGNMENT 0 YS2-5f04.p1k chr05 132 62 61962 61961 C 71 0.00 1477 reject_low 17 ALIGNMENT 0 YS2-5f04.p1k chr05 914 205 61891 61890 C 710 0.00 1477 reject_low 17 ALIGNMENT 0 YS2-5f04.p1k chr03 914 63 168448 168447 C 852 0.00 1477 reject_low 7 ALIGNMENT 0 YS2-5f04.p1k chr04 210 914 83624 83623 F 705 0.00 1477 reject_low 16 ALIGNMENT 0 YS2-5f04.p1k chr01 914 63 182678 182677 C 852 0.00 1477 reject_low 6 ALIGNMENT 0 YS2-5f04.p1k chr16 62 132 860374 860373 F 71 0.00 1477 reject_low 13 ALIGNMENT 75 YS2-5f04.p1k chr16 133 210 860374 860451 F 78 98.72 1477 reject_low 13 ALIGNMENT 20 YS2-5f04.p1k chr07 62 38 712273 712297 C 25 100.00 1477 reject_low 9 ALIGNMENT 74 YS2-5f04.p1k chr16 134 210 572266 572342 F 77 98.70 1477 reject_low 15 ALIGNMENT 72 YS2-5f04.p1k chr10 204 133 396642 396713 C 72 100.00 1477 reject_low 19 ALIGNMENT 0 YS2-5f04.p1k chr15 205 914 282234 282233 F 710 0.00 1477 reject_low 21 ALIGNMENT 0 YS2-5f04.p1k chr05 63 914 434904 434903 F 852 0.00 1477 reject_low 8 ALIGNMENT 20 YS2-5f04.p1k chr05 38 62 434880 434904 F 25 100.00 1477 reject_low 8 ALIGNMENT 72 YS2-5f04.p1k chr05 204 133 61890 61961 C 72 100.00 1477 reject_low 17 ALIGNMENT 0 YS2-5f04.p1k chr07 914 212 930950 930949 C 703 0.00 1477 reject_low 14 ALIGNMENT 0 YS2-5f04.p1k chr16 62 739 778645 778644 F 678 0.00 1477 reject_low 2 ALIGNMENT 0 YS2-5f04.p1k chr10 205 914 531812 531811 F 710 0.00 1477 reject_low 20 ALIGNMENT 0 YS2-5f04.p1k chr10 62 132 531741 531740 F 71 0.00 1477 reject_low 20 ALIGNMENT 73 YS2-5f04.p1k chr06 123 204 162211 162292 F 82 96.34 1477 reject_low 5 ALIGNMENT 0 YS2-5f04.p1k chr13 133 62 183969 183968 C 72 0.00 1477 reject_low 10 ALIGNMENT 75 YS2-5f04.p1k chr13 212 134 183890 183968 C 79 98.73 1477 reject_low 10 ALIGNMENT 0 YS2-5f04.p1k chr07 132 62 931028 931027 C 71 0.00 1477 reject_low 14 ALIGNMENT 74 YS2-5f04.p1k chr04 75 211 992765 992903 F 137 85.40 1477 reject_low 4 ALIGNMENT 0 YS2-5f04.p1k chr13 914 213 183891 183890 C 702 0.00 1477 reject_low 10 ALIGNMENT 0 YS2-5f04.p1k chr15 62 133 282164 282163 F 72 0.00 1477 reject_low 21 ALIGNMENT 0 YS2-5f04.p1k chr06 62 122 162211 162210 F 61 0.00 1477 reject_low 5 ALIGNMENT 0 YS2-5f04.p1k chr04 212 914 992903 992902 F 703 0.00 1477 reject_low 4 ALIGNMENT 124 YS2-5f04.p1k chr16 740 1082 778645 778989 F 343 79.88 1477 reject_low 2 ALIGNMENT 0 YS2-5f04.p1k chr06 205 914 162292 162291 F 710 0.00 1477 reject_low 5 ALIGNMENT 74 YS2-5f04.p1k chr04 133 209 83548 83624 F 77 98.70 1477 reject_low 16 ALIGNMENT 0 YS2-5f04.p1k chr16 211 914 860451 860450 F 704 0.00 1477 reject_low 13 ALIGNMENT 73 YS2-5f04.p1k chr07 211 133 930949 931027 C 79 97.47 1477 reject_low 14 ALIGNMENT 70 YS2-5f04.p1k chr15 134 204 282164 282234 F 71 100.00 1477 reject_low 21 ALIGNMENT 0 YS2-5f04.p1k chr16 496 62 55393 55392 C 435 0.00 1477 reject_low 1 ALIGNMENT 0 YS2-5f04.p1k chr16 211 914 572342 572341 F 704 0.00 1477 reject_low 15 ALIGNMENT 0 YS2-5f04.p1k chr06 914 205 180967 180966 C 710 0.00 1477 reject_low 18 ALIGNMENT 20 YS2-5f04.p1k chr03 62 38 168447 168471 C 25 100.00 1477 reject_low 7 ALIGNMENT 0 YS2-5f04.p1k chr07 62 132 845653 845652 F 71 0.00 1477 reject_low 12 ALIGNMENT 72 YS2-5f04.p1k chr06 204 133 180966 181037 C 72 100.00 1477 reject_low 18 ALIGNMENT 72 YS2-5f04.p1k chr10 133 204 531741 531812 F 72 100.00 1477 reject_low 20 ALIGNMENT 245 YS2-5f05.q1k vc_1 1 301 2689 2990 F 301 94.35 665 reject_vc 4 ALIGNMENT 291 YS2-5f05.q1k vc_5 1 504 2556 3060 F 504 87.30 665 reject_vc 1 ALIGNMENT 245 YS2-5f05.q1k vc_3 1 301 2689 2990 F 301 94.35 665 reject_vc 6 ALIGNMENT 191 YS2-5f05.q1k vc_7 301 53 4923 5172 C 249 92.77 665|0,1 reject_vc 7 ALIGNMENT 0 YS2-5f05.p1k chr15 449 432 521530 521529 C 18 0.00 449 accept 0 ALIGNMENT 245 YS2-5f05.q1k vc_2 1 301 2322 2623 F 301 94.35 665 reject_vc 5 ALIGNMENT 48 YS2-5f05.q1k vc_4 317 504 1890 2076 F 188 79.26 665 reject_vc 8 ALIGNMENT 51 YS2-5f05.q1k vc_7 54 3 6360 6411 C 52 100.00 665|1,0 reject_vc 7 ALIGNMENT 379 YS2-5f05.p1k chr15 431 34 521529 521926 C 398 98.74 449 accept 0 ALIGNMENT 0 YS2-5f05.q1k vc_7 53 54 5172 6360 C 0 0.00 665 reject_vc 7 ALIGNMENT 287 YS2-5f05.q1k vc_7 475 1 2094 2569 C 475 88.21 665 reject_vc 2 ALIGNMENT 265 YS2-5f05.q1k vc_4 415 1 5234 5654 C 415 88.92 665 reject_vc 3 ALIGNMENT 245 YS2-5f06.q1k vc_7 388 1 2190 2569 C 388 89.69 984 reject_vc 0 ALIGNMENT 0 YS2-5f06.q1k vc_7 53 54 5172 6360 C 0 0.00 984 reject_low 6 ALIGNMENT 175 YS2-5f06.q1k vc_7 303 53 4923 5172 C 251 90.44 984|0,1 reject_low 6 ALIGNMENT 227 YS2-5f06.q1k vc_1 1 303 2689 2990 F 303 92.08 984 reject_low 3 ALIGNMENT 244 YS2-5f06.q1k vc_5 1 388 2556 2935 F 388 89.69 984 reject_vc 1 ALIGNMENT 227 YS2-5f06.q1k vc_3 1 303 2689 2990 F 303 92.08 984 reject_low 5 ALIGNMENT 227 YS2-5f06.q1k vc_2 1 303 2322 2623 F 303 92.08 984 reject_low 4 ALIGNMENT 238 YS2-5f06.q1k vc_4 388 1 5273 5654 C 388 89.18 984 reject_vc 2 ALIGNMENT 48 YS2-5f06.q1k vc_7 54 3 6360 6411 C 52 98.08 984|1,0 reject_low 6 ALIGNMENT 688 YS2-5f07.q1k chr05 28 932 246958 247848 F 905 94.36 1349 accept 0 ALIGNMENT 928 YS2-5f07.p1k chr05 1118 34 251198 252293 C 1085 96.41 1477 accept 0 ALIGNMENT 341 YS2-5f08.q1k vc_5 1 514 2556 3072 F 514 89.69 840 reject_vc 0 ALIGNMENT 0 YS2-5f08.q1k vc_4 305 316 1615 1887 F 12 0.00 840 reject_low 7 ALIGNMENT 272 YS2-5f08.q1k vc_2 1 303 2322 2624 F 303 96.70 840 reject_low 4 ALIGNMENT 0 YS2-5f08.q1k vc_4 237 62 6340 6339 C 176 0.00 840 reject_low 9 ALIGNMENT 0 YS2-5f08.q1k vc_7 53 54 5172 6360 C 0 0.00 840 reject_low 6 ALIGNMENT 63 YS2-5f08.q1k vc_4 317 514 1888 2088 F 198 79.80 840 reject_low 7 ALIGNMENT 0 YS2-5f08.q1k vc_4 237 62 113 112 C 176 0.00 840 reject_low 8 ALIGNMENT 0 YS2-5f08.q1k vc_7 304 304 4700 4921 C 1 0.00 840 reject_low 6 ALIGNMENT 272 YS2-5f08.q1k vc_1 1 303 2689 2991 F 303 96.70 840 reject_low 3 ALIGNMENT 0 YS2-5f08.q1k vc_4 62 237 1548 1547 F 176 0.00 840 reject_low 7 ALIGNMENT 272 YS2-5f08.q1k vc_3 1 303 2689 2991 F 303 96.70 840 reject_low 5 ALIGNMENT 308 YS2-5f08.q1k vc_4 407 1 5242 5654 C 407 92.63 840 reject_low 2 ALIGNMENT 50 YS2-5f08.q1k vc_4 304 238 46 112 C 67 92.54 840 reject_low 8 ALIGNMENT 341 YS2-5f08.q1k vc_7 514 1 2053 2569 C 514 89.88 840 reject_vc 1 ALIGNMENT 217 YS2-5f08.q1k vc_7 303 53 4922 5172 C 251 95.62 840|0,1 reject_low 6 ALIGNMENT 50 YS2-5f08.q1k vc_4 304 238 6273 6339 C 67 92.54 840 reject_low 9 ALIGNMENT 50 YS2-5f08.q1k vc_4 238 304 1548 1614 F 67 92.54 840 reject_low 7 ALIGNMENT 51 YS2-5f08.q1k vc_7 54 3 6360 6411 C 52 100.00 840|1,0 reject_low 6 ALIGNMENT 41 YS2-5f08.q1k vc_7 407 305 4593 4699 C 103 82.52 840 reject_low 6 ALIGNMENT 763 YS2-5f09.q1k chr10 957 32 708316 709237 C 926 94.92 1340 accept 0 ALIGNMENT 980 YS2-5f09.p1k chr10 31 1168 704478 705631 F 1138 96.22 1497 accept 0 ALIGNMENT 0 YS2-5f10.q1k vc_4 237 62 6340 6339 C 176 0.00 996 reject_low 9 ALIGNMENT 0 YS2-5f10.q1k vc_4 305 310 1615 1881 F 6 0.00 996 reject_low 6 ALIGNMENT 289 YS2-5f10.q1k vc_1 1 303 2689 2991 F 303 98.68 996 reject_low 3 ALIGNMENT 0 YS2-5f10.q1k vc_4 237 62 113 112 C 176 0.00 996 reject_low 8 ALIGNMENT 289 YS2-5f10.q1k vc_2 1 303 2322 2624 F 303 98.68 996 reject_low 4 ALIGNMENT 477 YS2-5f10.q1k vc_7 660 1 1913 2569 C 660 91.52 996 reject_vc 1 ALIGNMENT 235 YS2-5f10.q1k vc_7 303 53 4922 5172 C 251 98.01 996|0,1 reject_low 7 ALIGNMENT 98 YS2-5f10.q1k vc_7 421 305 4583 4699 C 117 94.87 996 reject_low 7 ALIGNMENT 0 YS2-5f10.q1k vc_7 304 304 4700 4921 C 1 0.00 996 reject_low 7 ALIGNMENT 289 YS2-5f10.q1k vc_3 1 303 2689 2991 F 303 98.68 996 reject_low 5 ALIGNMENT 477 YS2-5f10.q1k vc_5 1 660 2556 3212 F 660 91.52 996 reject_vc 0 ALIGNMENT 61 YS2-5f10.q1k vc_4 238 304 1548 1614 F 67 98.51 996 reject_low 6 ALIGNMENT 0 YS2-5f10.q1k vc_4 62 237 1548 1547 F 176 0.00 996 reject_low 6 ALIGNMENT 182 YS2-5f10.q1k vc_4 311 660 1882 2228 F 350 85.43 996 reject_low 6 ALIGNMENT 61 YS2-5f10.q1k vc_4 304 238 6273 6339 C 67 98.51 996 reject_low 9 ALIGNMENT 61 YS2-5f10.q1k vc_4 304 238 46 112 C 67 98.51 996 reject_low 8 ALIGNMENT 51 YS2-5f10.q1k vc_7 54 3 6360 6411 C 52 100.00 996|1,0 reject_low 7 ALIGNMENT 0 YS2-5f10.q1k vc_7 53 54 5172 6360 C 0 0.00 996 reject_low 7 ALIGNMENT 382 YS2-5f10.q1k vc_4 421 1 5232 5654 C 421 97.15 996 reject_low 2 ALIGNMENT 0 YS2-5f11.q1k vc_4 62 344 126 125 F 283 0.00 1346 reject_low 8 ALIGNMENT 0 YS2-5f11.q1k chr16 430 306 500953 500952 C 125 0.00 1346 accept_chi 0 ALIGNMENT 86 YS2-5f11.q1k vc_4 431 345 1448 1534 C 87 100.00 1346 reject_low 11 ALIGNMENT 0 YS2-5f11.q1k vc_5 430 343 2 1 C 88 0.00 1346 reject_low 17 ALIGNMENT 263 YS2-5f11.q1k vc_3 345 741 2531 2920 F 397 90.43 1346 reject_low 4 ALIGNMENT 271 YS2-5f11.p1k chr16 66 349 500991 501274 F 284 99.65 367 accept_chi 1 ALIGNMENT 0 YS2-5f11.q1k vc_4 346 345 5872 6353 F 0 0.00 1346 reject_low 9 ALIGNMENT 0 YS2-5f11.q1k vc_1 304 62 2513 2512 C 243 0.00 1346 reject_low 12 ALIGNMENT 41 YS2-5f11.q1k vc_4 305 345 5831 5871 F 41 100.00 1346 reject_low 9 ALIGNMENT 0 YS2-5f11.q1k vc_5 430 346 5026 5025 C 85 0.00 1346 reject_low 15 ALIGNMENT 41 YS2-5f11.q1k vc_3 345 305 2472 2512 C 41 100.00 1346 reject_low 14 ALIGNMENT 143 YS2-5f11.q1k vc_4 345 507 6353 6514 F 163 96.93 1346|1,0 reject_low 9 ALIGNMENT 0 YS2-5f11.p1k chr16 350 367 501274 501273 F 18 0.00 367 accept_chi 1 ALIGNMENT 0 YS2-5f11.q1k vc_5 62 344 2398 2397 F 283 0.00 1346 reject_low 5 ALIGNMENT 0 YS2-5f11.q1k vc_1 62 344 2531 2530 F 283 0.00 1346 reject_low 2 ALIGNMENT 0 YS2-5f11.q1k vc_2 430 346 2106 2105 C 85 0.00 1346 reject_low 13 ALIGNMENT 263 YS2-5f11.q1k vc_7 741 345 2338 2727 C 397 90.43 1346 reject_low 6 ALIGNMENT 41 YS2-5f11.q1k vc_1 345 305 2472 2512 C 41 100.00 1346 reject_low 12 ALIGNMENT 41 YS2-5f11.q1k vc_2 345 305 2105 2145 C 41 100.00 1346 reject_low 13 ALIGNMENT 0 YS2-5f11.q1k vc_7 346 430 13562 13561 F 85 0.00 1346 reject_low 16 ALIGNMENT 0 YS2-5f11.q1k vc_5 306 62 37 36 C 245 0.00 1346 reject_low 17 ALIGNMENT 0 YS2-5f11.q1k vc_4 344 62 5813 5812 C 283 0.00 1346 reject_low 7 ALIGNMENT 39 YS2-5f11.q1k vc_5 345 307 5025 5063 C 39 100.00 1346 reject_low 15 ALIGNMENT 36 YS2-5f11.q1k vc_5 342 307 1 36 C 36 100.00 1346 reject_low 17 ALIGNMENT 0 YS2-5f11.q1k vc_2 304 62 2146 2145 C 243 0.00 1346 reject_low 13 ALIGNMENT 0 YS2-5f11.q1k vc_7 62 307 13525 13524 F 246 0.00 1346 reject_low 16 ALIGNMENT 0 YS2-5f11.q1k vc_2 62 344 2164 2163 F 283 0.00 1346 reject_low 3 ALIGNMENT 0 YS2-5f11.q1k vc_1 430 346 2473 2472 C 85 0.00 1346 reject_low 12 ALIGNMENT 0 YS2-5f11.q1k vc_3 304 62 2513 2512 C 243 0.00 1346 reject_low 14 ALIGNMENT 0 YS2-5f11.q1k vc_3 430 346 2473 2472 C 85 0.00 1346 reject_low 14 ALIGNMENT 0 YS2-5f11.q1k vc_7 344 62 2728 2727 C 283 0.00 1346 reject_low 6 ALIGNMENT 263 YS2-5f11.q1k vc_5 345 741 2398 2787 F 397 90.43 1346 reject_low 5 ALIGNMENT 263 YS2-5f11.q1k vc_1 345 741 2531 2920 F 397 90.43 1346 reject_low 2 ALIGNMENT 0 YS2-5f11.q1k vc_5 306 62 5064 5063 C 245 0.00 1346 reject_low 15 ALIGNMENT 263 YS2-5f11.q1k vc_2 345 741 2164 2553 F 397 90.43 1346 reject_low 3 ALIGNMENT 38 YS2-5f11.q1k vc_7 308 345 13525 13562 F 38 100.00 1346 reject_low 16 ALIGNMENT 0 YS2-5f11.q1k vc_3 62 344 2531 2530 F 283 0.00 1346 reject_low 4 ALIGNMENT 0 YS2-5f11.q1k vc_7 557 62 5173 5172 C 496 0.00 1346 reject_low 10 ALIGNMENT 272 YS2-5f11.q1k chr16 305 5 500952 501252 C 301 98.34 1346 accept_chi 0 ALIGNMENT 261 YS2-5f11.q1k vc_4 741 345 5421 5812 C 397 90.18 1346 reject_low 7 ALIGNMENT 0 YS2-5f11.q1k vc_4 344 62 1535 1534 C 283 0.00 1346 reject_low 11 ALIGNMENT 0 YS2-5f11.q1k vc_4 62 304 5831 5830 F 243 0.00 1346 reject_low 9 ALIGNMENT 143 YS2-5f11.q1k vc_4 345 507 126 287 F 163 96.93 1346 reject_low 8 ALIGNMENT 79 YS2-5f11.q1k vc_7 741 558 4993 5172 C 184 83.15 1346 reject_low 10 ALIGNMENT 72 YS2-5f12.p1k chr16 353 478 850645 850770 F 126 88.10 1479 reject_low 12 ALIGNMENT 72 YS2-5f12.p1k chr10 478 353 472569 472694 C 126 88.10 1479 reject_low 11 ALIGNMENT 62 YS2-5f12.p1k chr16 353 455 804661 804763 F 103 88.35 1479 reject_low 18 ALIGNMENT 0 YS2-5f12.p1k chr16 62 352 804661 804660 F 291 0.00 1479 reject_low 18 ALIGNMENT 72 YS2-5f12.p1k chr07 478 353 535956 536081 C 126 88.10 1479 reject_low 9 ALIGNMENT 0 YS2-5f12.p1k chr04 62 348 645513 645512 F 287 0.00 1479 reject_low 7 ALIGNMENT 0 YS2-5f12.p1k chr05 62 348 443409 443408 F 287 0.00 1479 reject_low 5 ALIGNMENT 22 YS2-5f12.q1k chr08 748 825 466718 466792 F 78 82.05 1346 reject_low 25 ALIGNMENT 0 YS2-5f12.p1k chr05 352 62 62737 62736 C 291 0.00 1479 reject_low 15 ALIGNMENT 0 YS2-5f12.q1k chr08 62 588 466540 466539 F 527 0.00 1346 reject_low 25 ALIGNMENT 0 YS2-5f12.p1k chr03 921 626 149499 149498 C 296 0.00 1479 reject_low 26 ALIGNMENT 101 YS2-5f12.p1k chr11 353 517 313267 313430 F 165 89.70 1479 reject_low 24 ALIGNMENT 0 YS2-5f12.p1k chr06 352 62 143918 143917 C 291 0.00 1479 reject_low 22 ALIGNMENT 45 YS2-5f12.p1k chr11 528 589 313461 313522 F 62 91.94 1479 reject_low 24 ALIGNMENT 0 YS2-5f12.p1k chr10 921 479 472570 472569 C 443 0.00 1479 reject_low 11 ALIGNMENT 95 YS2-5f12.p1k chr04 353 517 434440 434603 F 165 88.48 1479 reject_low 1 ALIGNMENT 0 YS2-5f12.p1k chr05 921 479 312303 312302 C 443 0.00 1479 reject_low 20 ALIGNMENT 59 YS2-5f12.p1k chr04 478 353 1151216 1151340 C 126 84.92 1479 reject_low 16 ALIGNMENT 23 YS2-5f12.p1k chr06 400 353 143870 143917 C 48 85.42 1479 reject_low 22 ALIGNMENT 0 YS2-5f12.p1k chr06 921 456 143747 143746 C 466 0.00 1479 reject_low 21 ALIGNMENT 0 YS2-5f12.p1k chr07 352 62 402274 402273 C 291 0.00 1479 reject_low 14 ALIGNMENT 0 YS2-5f12.p1k chr15 62 352 2914 2913 F 291 0.00 1479 reject_low 3 ALIGNMENT 0 YS2-5f12.p1k chr06 355 62 143844 143843 C 294 0.00 1479 reject_low 21 ALIGNMENT 0 YS2-5f12.p1k chr06 921 401 143871 143870 C 521 0.00 1479 reject_low 22 ALIGNMENT 0 YS2-5f12.p1k chr11 590 921 313522 313521 F 332 0.00 1479 reject_low 24 ALIGNMENT 0 YS2-5f12.p1k chr05 479 921 443538 443537 F 443 0.00 1479 reject_low 5 ALIGNMENT 48 YS2-5f12.p1k chr16 477 354 804516 804634 C 124 84.68 1479 reject_low 19 ALIGNMENT 0 YS2-5f12.p1k chr12 62 348 215097 215096 F 287 0.00 1479 reject_low 6 ALIGNMENT 65 YS2-5f12.p1k chr04 349 455 645513 645619 F 107 88.79 1479 reject_low 7 ALIGNMENT 0 YS2-5f12.p1k chr07 352 62 536082 536081 C 291 0.00 1479 reject_low 9 ALIGNMENT 0 YS2-5f12.p1k chr11 518 527 313431 313460 F 10 0.00 1479 reject_low 24 ALIGNMENT 0 YS2-5f12.p1k chr01 62 352 160259 160258 F 291 0.00 1479 reject_low 8 ALIGNMENT 0 YS2-5f12.p1k chr04 352 62 1151341 1151340 C 291 0.00 1479 reject_low 16 ALIGNMENT 65 YS2-5f12.p1k chr07 476 353 402150 402273 C 124 86.29 1479 reject_low 14 ALIGNMENT 21 YS2-5f12.p1k chr04 354 376 1151365 1151387 F 23 100.00 1479 reject_low 23 ALIGNMENT 48 YS2-5f12.p1k chr04 528 589 434634 434695 F 62 93.55 1479 reject_low 4 ALIGNMENT 0 YS2-5f12.p1k chr07 352 62 541670 541669 C 291 0.00 1479 reject_low 10 ALIGNMENT 34 YS2-5f12.p1k chr03 625 528 149498 149597 C 98 80.61 1479 reject_low 26 ALIGNMENT 72 YS2-5f12.p1k chr05 349 478 443409 443538 F 130 87.69 1479 reject_low 5 ALIGNMENT 0 YS2-5f12.p1k chr04 62 527 434634 434633 F 466 0.00 1479 reject_low 4 ALIGNMENT 919 YS2-5f12.p1k chr02 33 1171 258370 259522 F 1139 95.96 1479 accept 0 ALIGNMENT 0 YS2-5f12.p1k chr16 921 478 804517 804516 C 444 0.00 1479 reject_low 19 ALIGNMENT 46 YS2-5f12.p1k chr05 507 353 62582 62736 C 155 79.35 1479 reject_low 15 ALIGNMENT 0 YS2-5f12.q1k chr08 684 747 466638 466717 F 64 0.00 1346 reject_low 25 ALIGNMENT 0 YS2-5f12.q1k chr04 634 62 434696 434695 C 573 0.00 1346 reject_low 1 ALIGNMENT 43 YS2-5f12.q1k chr04 696 635 434634 434695 C 62 90.32 1346 reject_low 1 ALIGNMENT 0 YS2-5f12.p1k chr04 62 353 1151365 1151364 F 292 0.00 1479 reject_low 23 ALIGNMENT 0 YS2-5f12.p1k chr12 479 921 215226 215225 F 443 0.00 1479 reject_low 6 ALIGNMENT 0 YS2-5f12.q1k chr04 706 697 434604 434633 C 10 0.00 1346 reject_low 1 ALIGNMENT 0 YS2-5f12.p1k chr11 62 352 313267 313266 F 291 0.00 1479 reject_low 24 ALIGNMENT 0 YS2-5f12.p1k chr07 352 62 876265 876264 C 291 0.00 1479 reject_low 13 ALIGNMENT 0 YS2-5f12.p1k chr10 352 62 472695 472694 C 291 0.00 1479 reject_low 11 ALIGNMENT 21 YS2-5f12.q1k chr08 589 683 466540 466637 F 95 76.84 1346 reject_low 25 ALIGNMENT 676 YS2-5f12.q1k chr02 968 30 258600 259532 C 939 93.18 1346 accept 0 ALIGNMENT 45 YS2-5f12.p1k chr05 478 353 312302 312427 C 126 80.95 1479 reject_low 20 ALIGNMENT 0 YS2-5f12.q1k chr12 773 62 818194 818193 C 712 0.00 1346 reject_low 2 ALIGNMENT 68 YS2-5f12.p1k chr07 478 353 876138 876264 C 126 87.30 1479 reject_low 13 ALIGNMENT 0 YS2-5f12.p1k chr16 456 921 804763 804762 F 466 0.00 1479 reject_low 18 ALIGNMENT 62 YS2-5f12.p1k chr03 477 354 149663 149786 C 124 85.48 1479 reject_low 26 ALIGNMENT 0 YS2-5f12.p1k chr15 590 921 3168 3167 F 332 0.00 1479 reject_low 3 ALIGNMENT 0 YS2-5f12.p1k chr05 352 62 312428 312427 C 291 0.00 1479 reject_low 20 ALIGNMENT 0 YS2-5f12.p1k chr12 921 456 593359 593358 C 466 0.00 1479 reject_low 17 ALIGNMENT 0 YS2-5f12.p1k chr07 921 479 535957 535956 C 443 0.00 1479 reject_low 9 ALIGNMENT 0 YS2-5f12.p1k chr03 527 478 149598 149662 C 50 0.00 1479 reject_low 26 ALIGNMENT 34 YS2-5f12.q1k chr12 874 774 818097 818193 C 101 82.18 1346 reject_low 2 ALIGNMENT 0 YS2-5f12.p1k chr03 353 62 149787 149786 C 292 0.00 1479 reject_low 26 ALIGNMENT 0 YS2-5f12.p1k chr07 921 479 876139 876138 C 443 0.00 1479 reject_low 13 ALIGNMENT 0 YS2-5f12.p1k chr07 921 477 402151 402150 C 445 0.00 1479 reject_low 14 ALIGNMENT 47 YS2-5f12.p1k chr06 455 356 143746 143843 C 100 85.00 1479 reject_low 21 ALIGNMENT 0 YS2-5f12.p1k chr16 479 921 850770 850769 F 443 0.00 1479 reject_low 12 ALIGNMENT 0 YS2-5f12.p1k chr04 456 921 645619 645618 F 466 0.00 1479 reject_low 7 ALIGNMENT 72 YS2-5f12.p1k chr01 353 478 160259 160384 F 126 88.10 1479 reject_low 8 ALIGNMENT 62 YS2-5f12.p1k chr12 455 353 593358 593460 C 103 88.35 1479 reject_low 17 ALIGNMENT 0 YS2-5f12.p1k chr07 921 479 541545 541544 C 443 0.00 1479 reject_low 10 ALIGNMENT 0 YS2-5f12.p1k chr16 62 352 850645 850644 F 291 0.00 1479 reject_low 12 ALIGNMENT 0 YS2-5f12.p1k chr05 921 508 62583 62582 C 414 0.00 1479 reject_low 15 ALIGNMENT 0 YS2-5f12.p1k chr04 377 921 1151387 1151386 F 545 0.00 1479 reject_low 23 ALIGNMENT 0 YS2-5f12.p1k chr04 518 921 434603 434602 F 404 0.00 1479 reject_low 1 ALIGNMENT 72 YS2-5f12.p1k chr07 478 353 541544 541669 C 126 88.10 1479 reject_low 10 ALIGNMENT 68 YS2-5f12.p1k chr15 353 589 2914 3168 F 237 78.90 1479 reject_low 3 ALIGNMENT 0 YS2-5f12.p1k chr01 479 921 160384 160383 F 443 0.00 1479 reject_low 8 ALIGNMENT 0 YS2-5f12.p1k chr16 353 62 804635 804634 C 292 0.00 1479 reject_low 19 ALIGNMENT 0 YS2-5f12.p1k chr04 921 479 1151217 1151216 C 443 0.00 1479 reject_low 16 ALIGNMENT 0 YS2-5f12.p1k chr04 590 921 434695 434694 F 332 0.00 1479 reject_low 4 ALIGNMENT 72 YS2-5f12.p1k chr12 349 478 215097 215226 F 130 87.69 1479 reject_low 6 ALIGNMENT 0 YS2-5f12.p1k chr04 62 352 434440 434439 F 291 0.00 1479 reject_low 1 ALIGNMENT 40 YS2-5f12.q1k chr04 835 707 434481 434603 C 129 82.95 1346 reject_low 1 ALIGNMENT 0 YS2-5f12.p1k chr12 352 62 593461 593460 C 291 0.00 1479 reject_low 17 ALIGNMENT 908 YS2-5f14.p1k chr16 32 1153 377979 379111 F 1122 95.37 1459 accept 0 ALIGNMENT 0 YS2-5f14.q1k chr15 62 89 236956 236955 F 28 0.00 1254 reject_low 1 ALIGNMENT 745 YS2-5f14.q1k chr16 929 15 378632 379532 C 915 95.52 1254 accept 0 ALIGNMENT 23 YS2-5f14.q1k chr15 90 158 236956 237024 F 69 86.96 1254 reject_low 1 ALIGNMENT 0 YS2-5f14.q1k chr15 159 611 237024 237023 F 453 0.00 1254 reject_low 1 ALIGNMENT 48 YS2-5f15.p1k chr08 523 476 558088 558135 C 48 100.00 1487 reject_low 16 ALIGNMENT 411 YS2-5f15.p1k chr12 33 466 4034 4468 F 434 98.62 1487 reject_low 1 ALIGNMENT 0 YS2-5f15.p1k chr16 667 927 6781 6780 F 261 0.00 1487 reject_low 2 ALIGNMENT 48 YS2-5f15.p1k chr16 476 523 5354 5401 F 48 100.00 1487 reject_low 2 ALIGNMENT 346 YS2-5f15.p1k chr05 33 523 4988 5447 F 491 92.87 1487 reject_low 3 ALIGNMENT 48 YS2-5f15.p1k chr12 476 523 4495 4542 F 48 100.00 1487 reject_low 1 ALIGNMENT 411 YS2-5f15.p1k chr04 466 35 1526644 1527076 C 432 98.84 1487 reject_low 10 ALIGNMENT 402 YS2-5f15.p1k chr02 33 466 4235 4669 F 434 97.93 1487 reject_low 14 ALIGNMENT 0 YS2-5f15.p1k chr10 467 475 5791 5816 F 9 0.00 1487 reject_low 5 ALIGNMENT 0 YS2-5f15.p1k chr02 524 927 4743 4742 F 404 0.00 1487 reject_low 14 ALIGNMENT 0 YS2-5f15.p1k chr16 524 556 5402 6144 F 33 0.00 1487 reject_low 2 ALIGNMENT 0 YS2-5f15.p1k chr14 524 927 5492 5491 F 404 0.00 1487 reject_low 17 ALIGNMENT 411 YS2-5f15.p1k chr15 466 35 1085809 1086241 C 432 98.84 1487 reject_low 11 ALIGNMENT 0 YS2-5f15.p1k chr12 556 523 1072033 1072771 C 34 0.00 1487 reject_low 19 ALIGNMENT 0 YS2-5f15.p1k chr16 467 475 5328 5353 F 9 0.00 1487 reject_low 2 ALIGNMENT 0 YS2-5f15.p1k chr08 524 927 4274 4273 F 404 0.00 1487 reject_low 6 ALIGNMENT 0 YS2-5f15.p1k chr14 467 475 5419 5444 F 9 0.00 1487 reject_low 17 ALIGNMENT 0 YS2-5f15.p1k chr10 524 927 5864 5863 F 404 0.00 1487 reject_low 5 ALIGNMENT 33 YS2-5f15.p1k chr12 603 557 1071986 1072032 C 47 91.49 1487 reject_low 19 ALIGNMENT 48 YS2-5f15.p1k chr02 476 523 4696 4743 F 48 100.00 1487 reject_low 14 ALIGNMENT 0 YS2-5f15.p1k chr08 467 475 4201 4226 F 9 0.00 1487 reject_low 6 ALIGNMENT 0 YS2-5f15.p1k chr12 604 927 5326 5325 F 324 0.00 1487 reject_low 1 ALIGNMENT 0 YS2-5f15.p1k chr06 523 927 3579 3578 F 405 0.00 1487 reject_low 12 ALIGNMENT 289 YS2-5f15.p1k chr12 466 33 1066293 1066695 C 434 91.94 1487 reject_low 18 ALIGNMENT 411 YS2-5f15.p1k chr12 33 466 9569 10003 F 434 98.62 1487 reject_low 7 ALIGNMENT 402 YS2-5f15.p1k chr07 466 33 1085550 1085984 C 434 97.93 1487 reject_low 15 ALIGNMENT 48 YS2-5f15.p1k chr10 476 523 5817 5864 F 48 100.00 1487 reject_low 5 ALIGNMENT 0 YS2-5f15.p1k chr12 475 467 1066267 1072844 C 9 0.00 1487 reject_low 9 ALIGNMENT 0 YS2-5f15.p1k chr06 467 475 3507 3532 F 9 0.00 1487 reject_low 12 ALIGNMENT 0 YS2-5f15.p1k chr15 927 523 1085737 1085736 C 405 0.00 1487 reject_low 11 ALIGNMENT 0 YS2-5f15.p1k chr07 475 467 1085524 1085549 C 9 0.00 1487 reject_low 15 ALIGNMENT 0 YS2-5f15.p1k chr12 927 524 1066220 1066219 C 404 0.00 1487 reject_low 9,18 ALIGNMENT 411 YS2-5f15.p1k chr12 466 35 1072845 1073277 C 432 98.84 1487 reject_low 9 ALIGNMENT 47 YS2-5f15.p1k chr16 522 476 943635 943681 C 47 100.00 1487 reject_low 13 ALIGNMENT 0 YS2-5f15.p1k chr16 927 523 943636 943635 C 405 0.00 1487 reject_low 13 ALIGNMENT 423 YS2-5f15.p1k chr09 33 466 5373 5807 F 434 99.54 1487 reject_low 4 ALIGNMENT 48 YS2-5f15.p1k chr07 523 476 1085476 1085523 C 48 100.00 1487 reject_low 15 ALIGNMENT 471 YS2-5f15.p1k chr05 523 33 571416 571907 C 491 98.98 1487 accept_tel 0 ALIGNMENT 0 YS2-5f15.p1k chr12 475 62 1072819 1072818 C 414 0.00 1487 reject_low 19 ALIGNMENT 402 YS2-5f15.p1k chr08 466 33 558162 558596 C 434 97.93 1487 reject_low 16 ALIGNMENT 0 YS2-5f15.p1k chr07 927 524 1085477 1085476 C 404 0.00 1487 reject_low 15 ALIGNMENT 0 YS2-5f15.p1k chr05 524 927 5447 5446 F 404 0.00 1487 reject_low 3 ALIGNMENT 48 YS2-5f15.p1k chr08 476 523 4227 4274 F 48 100.00 1487 reject_low 6 ALIGNMENT 47 YS2-5f15.p1k chr15 522 476 1085736 1085782 C 47 100.00 1487 reject_low 11 ALIGNMENT 48 YS2-5f15.p1k chr12 523 476 1066219 1066266 C 48 100.00 1487 reject_low 9,18 ALIGNMENT 33 YS2-5f15.p1k chr12 557 603 5280 5326 F 47 91.49 1487 reject_low 1 ALIGNMENT 0 YS2-5f15.p1k chr13 524 927 4418 4417 F 404 0.00 1487 reject_low 8 ALIGNMENT 410 YS2-5f15.p1k chr06 33 466 3071 3506 F 434 98.62 1487 reject_low 12 ALIGNMENT 0 YS2-5f15.p1k chr04 475 467 1526618 1526643 C 9 0.00 1487 reject_low 10 ALIGNMENT 0 YS2-5f15.p1k chr05 927 524 571417 571416 C 404 0.00 1487 accept_tel 0 ALIGNMENT 0 YS2-5f15.p1k chr15 475 467 1085783 1085808 C 9 0.00 1487 reject_low 11 ALIGNMENT 32 YS2-5f15.p1k chr11 666 616 665999 666048 C 51 90.20 1487 reject_low 20 ALIGNMENT 411 YS2-5f15.p1k chr08 33 466 3766 4200 F 434 98.62 1487 reject_low 6 ALIGNMENT 0 YS2-5f15.p1k chr12 467 475 4469 4494 F 9 0.00 1487 reject_low 1 ALIGNMENT 402 YS2-5f15.p1k chr16 33 466 4893 5327 F 434 97.93 1487 reject_low 2 ALIGNMENT 0 YS2-5f15.p1k chr16 604 615 6192 6730 F 12 0.00 1487 reject_low 2 ALIGNMENT 423 YS2-5f15.p1k chr10 33 466 5356 5790 F 434 99.54 1487 reject_low 5 ALIGNMENT 48 YS2-5f15.p1k chr12 476 523 10030 10077 F 48 100.00 1487 reject_low 7 ALIGNMENT 0 YS2-5f15.p1k chr12 524 927 10077 10076 F 404 0.00 1487 reject_low 7 ALIGNMENT 47 YS2-5f15.p1k chr12 522 476 1072772 1072818 C 47 100.00 1487 reject_low 19 ALIGNMENT 0 YS2-5f15.p1k chr12 524 556 4543 5279 F 33 0.00 1487 reject_low 1 ALIGNMENT 47 YS2-5f15.p1k chr04 522 476 1526571 1526617 C 47 100.00 1487 reject_low 10 ALIGNMENT 0 YS2-5f15.p1k chr04 927 523 1526572 1526571 C 405 0.00 1487 reject_low 10 ALIGNMENT 0 YS2-5f15.p1k chr11 615 62 666049 666048 C 554 0.00 1487 reject_low 20 ALIGNMENT 48 YS2-5f15.p1k chr13 476 523 4371 4418 F 48 100.00 1487 reject_low 8 ALIGNMENT 0 YS2-5f15.p1k chr02 467 475 4670 4695 F 9 0.00 1487 reject_low 14 ALIGNMENT 47 YS2-5f15.p1k chr06 476 522 3533 3579 F 47 100.00 1487 reject_low 12 ALIGNMENT 0 YS2-5f15.p1k chr09 524 927 5881 5880 F 404 0.00 1487 reject_low 4 ALIGNMENT 0 YS2-5f15.p1k chr11 927 667 666000 665999 C 261 0.00 1487 reject_low 20 ALIGNMENT 0 YS2-5f15.p1k chr12 475 467 1066267 1066292 C 9 0.00 1487 reject_low 18 ALIGNMENT 0 YS2-5f15.p1k chr08 927 524 558089 558088 C 404 0.00 1487 reject_low 16 ALIGNMENT 48 YS2-5f15.p1k chr14 476 523 5445 5492 F 48 100.00 1487 reject_low 17 ALIGNMENT 0 YS2-5f15.p1k chr09 467 475 5808 5833 F 9 0.00 1487 reject_low 4 ALIGNMENT 0 YS2-5f15.p1k chr12 927 604 1071987 1071986 C 324 0.00 1487 reject_low 19 ALIGNMENT 0 YS2-5f15.p1k chr16 475 467 943682 943707 C 9 0.00 1487 reject_low 13 ALIGNMENT 411 YS2-5f15.p1k chr13 33 466 3910 4344 F 434 98.62 1487 reject_low 8 ALIGNMENT 31 YS2-5f15.p1k chr16 616 666 6731 6781 F 51 88.24 1487 reject_low 2 ALIGNMENT 0 YS2-5f15.p1k chr08 475 467 558136 558161 C 9 0.00 1487 reject_low 16 ALIGNMENT 402 YS2-5f15.p1k chr14 33 466 4984 5418 F 434 97.93 1487 reject_low 17 ALIGNMENT 48 YS2-5f15.p1k chr09 476 523 5834 5881 F 48 100.00 1487 reject_low 4 ALIGNMENT 0 YS2-5f15.p1k chr12 467 475 10004 10029 F 9 0.00 1487 reject_low 7 ALIGNMENT 410 YS2-5f15.p1k chr16 466 33 943708 944143 C 434 98.62 1487 reject_low 13 ALIGNMENT 33 YS2-5f15.p1k chr16 557 603 6145 6191 F 47 91.49 1487 reject_low 2 ALIGNMENT 0 YS2-5f15.p1k chr13 467 475 4345 4370 F 9 0.00 1487 reject_low 8 ALIGNMENT 1032 YS2-5f16.p1k chr05 37 1227 38532 39734 F 1191 96.73 1493 accept 0 ALIGNMENT 830 YS2-5f16.q1k chr05 1080 30 39899 40943 C 1051 94.20 1291 accept 0 ALIGNMENT 902 YS2-5f17.p1k chr03 69 1121 187822 188887 F 1053 97.15 1454 accept 0 ALIGNMENT 612 YS2-5f17.q1k chr03 710 1 192238 192947 C 710 96.34 1218 accept 0 ALIGNMENT 769 YS2-5f20.q1k chr13 32 1023 638125 639118 F 992 93.04 1225 accept 0 ALIGNMENT 910 YS2-5f20.p1k chr13 1038 37 641484 642497 C 1002 97.90 1387 accept 0 ALIGNMENT 691 YS2-5f21.q1k chr12 858 26 969560 970384 C 833 95.80 1268 accept 0 ALIGNMENT 928 YS2-5f21.p1k chr12 32 1083 964915 965983 F 1052 97.53 1321 accept 0 ALIGNMENT 186 YS2-5f22.q1k chr07 33 258 811558 811783 F 226 96.02 1196 reject_low 18 ALIGNMENT 0 YS2-5f22.q1k chr02 259 622 9424 9423 F 364 0.00 1196 reject_low 8 ALIGNMENT 0 YS2-5f22.q1k chr04 192 187 871811 877781 C 6 0.00 1196 reject_low 31 ALIGNMENT 0 YS2-5f22.q1k chr13 259 622 768878 768877 F 364 0.00 1196 reject_low 6 ALIGNMENT 0 YS2-5f22.q1k chr11 537 622 302679 302678 F 86 0.00 1196 reject_low 1 ALIGNMENT 0 YS2-5f22.q1k chr15 259 622 970613 970612 F 364 0.00 1196 reject_low 13 ALIGNMENT 189 YS2-5f22.q1k chr10 33 259 538123 538349 F 227 96.48 1196 reject_low 14 ALIGNMENT 32 YS2-5f22.q1k chr06 191 248 143869 143927 F 58 89.66 1196 reject_low 30 ALIGNMENT 201 YS2-5f22.q1k chr05 259 33 135607 135833 C 227 98.24 1196 reject_low 7 ALIGNMENT 180 YS2-5f22.q1k chr14 243 33 726630 726840 C 211 97.16 1196 reject_low 20 ALIGNMENT 204 YS2-5f22.q1k chr04 33 258 1352740 1352965 F 226 98.67 1196 reject_low 5 ALIGNMENT 0 YS2-5f22.q1k chr04 253 622 872141 872140 F 370 0.00 1196 reject_low 15 ALIGNMENT 0 YS2-5f22.q1k chr03 622 203 142804 142803 C 420 0.00 1196 reject_low 29 ALIGNMENT 0 YS2-5f22.q1k chr06 249 622 143927 143926 F 374 0.00 1196 reject_low 30 ALIGNMENT 186 YS2-5f22.q1k chr06 33 258 138014 138239 F 226 96.02 1196 reject_low 16 ALIGNMENT 182 YS2-5f22.q1k chr11 33 248 313944 314159 F 216 96.76 1196 reject_low 19 ALIGNMENT 0 YS2-5f22.q1k chr11 622 236 313271 313270 C 387 0.00 1196 reject_low 25 ALIGNMENT 202 YS2-5f22.q1k chr05 33 260 449401 449628 F 228 98.25 1196 reject_low 2 ALIGNMENT 0 YS2-5f22.q1k chr05 622 260 135608 135607 C 363 0.00 1196 reject_low 7 ALIGNMENT 998 YS2-5f22.p1k chr07 33 1235 874140 875354 F 1203 96.09 1385 accept 0 ALIGNMENT 0 YS2-5f22.q1k chr14 249 622 519487 519486 F 374 0.00 1196 reject_low 22 ALIGNMENT 0 YS2-5f22.q1k chr04 622 243 871761 871760 C 380 0.00 1196 reject_low 31 ALIGNMENT 0 YS2-5f22.q1k chr03 622 249 168606 168605 C 374 0.00 1196 reject_low 21 ALIGNMENT 198 YS2-5f22.q1k chr15 33 258 970388 970613 F 226 97.79 1196 reject_low 13 ALIGNMENT 0 YS2-5f22.q1k chr04 259 622 987123 987122 F 364 0.00 1196 reject_low 12 ALIGNMENT 26 YS2-5f22.q1k chr03 202 36 142803 142967 C 167 75.45 1196 reject_low 29 ALIGNMENT 0 YS2-5f22.q1k chr11 77 413 302557 302556 F 337 0.00 1196 reject_low 1 ALIGNMENT 201 YS2-5f22.q1k chr02 33 258 9199 9424 F 226 98.23 1196 reject_low 8 ALIGNMENT 165 YS2-5f22.q1k chr03 248 33 168605 168822 C 216 94.44 1196 reject_low 21 ALIGNMENT 159 YS2-5f22.q1k chr14 33 248 524836 525053 F 216 93.52 1196 reject_low 23 ALIGNMENT 86 YS2-5f22.q1k chr11 235 40 313270 313465 C 196 84.69 1196 reject_low 25 ALIGNMENT 0 YS2-5f22.q1k chr12 622 261 976253 976252 C 362 0.00 1196 reject_low 4 ALIGNMENT 122 YS2-5f22.q1k chr04 235 84 987167 987320 C 152 96.05 1196 reject_low 24 ALIGNMENT 0 YS2-5f22.q1k chr03 236 622 149784 149783 F 387 0.00 1196 reject_low 28 ALIGNMENT 29 YS2-5f22.q1k chr04 186 36 877782 877930 C 151 77.48 1196 reject_low 31 ALIGNMENT 198 YS2-5f22.q1k chr04 33 258 981271 981496 F 226 97.79 1196 reject_low 11 ALIGNMENT 0 YS2-5f22.q1k chr05 261 622 449628 449627 F 362 0.00 1196 reject_low 2 ALIGNMENT 28 YS2-5f22.q1k chr06 42 186 137766 137899 F 145 78.62 1196 reject_low 30 ALIGNMENT 0 YS2-5f22.q1k chr04 622 236 987168 987167 C 387 0.00 1196 reject_low 24 ALIGNMENT 0 YS2-5f22.q1k chr06 187 190 137900 143868 F 4 0.00 1196 reject_low 30 ALIGNMENT 61 YS2-5f22.q1k chr03 36 248 151627 151838 F 213 79.81 1196 reject_low 27 ALIGNMENT 0 YS2-5f22.q1k chr04 259 622 981496 981495 F 364 0.00 1196 reject_low 11 ALIGNMENT 159 YS2-5f22.q1k chr14 33 248 519270 519487 F 216 93.52 1196 reject_low 22 ALIGNMENT 199 YS2-5f22.q1k chr12 260 33 976252 976479 C 228 97.81 1196 reject_low 4 ALIGNMENT 202 YS2-5f22.q1k chr05 33 260 487935 488162 F 228 98.25 1196 reject_low 3 ALIGNMENT 0 YS2-5f22.q1k chr04 259 622 877774 877773 F 364 0.00 1196 reject_low 9 ALIGNMENT 195 YS2-5f22.q1k chr04 33 252 871922 872141 F 220 98.18 1196 reject_low 15 ALIGNMENT 198 YS2-5f22.q1k chr04 33 258 986898 987123 F 226 97.79 1196 reject_low 12 ALIGNMENT 0 YS2-5f22.q1k chr11 249 622 314159 314158 F 374 0.00 1196 reject_low 19 ALIGNMENT 0 YS2-5f22.q1k chr03 622 249 124142 124141 C 374 0.00 1196 reject_low 26 ALIGNMENT 0 YS2-5f22.q1k chr10 260 622 538349 538348 F 363 0.00 1196 reject_low 14 ALIGNMENT 201 YS2-5f22.q1k chr15 33 258 976015 976240 F 226 98.23 1196 reject_low 10 ALIGNMENT 0 YS2-5f22.q1k chr07 257 77 878983 878982 C 181 0.00 1196 accept 0 ALIGNMENT 107 YS2-5f22.q1k chr11 414 536 302557 302679 F 123 95.93 1196 reject_low 1 ALIGNMENT 204 YS2-5f22.q1k chr13 33 258 768653 768878 F 226 98.67 1196 reject_low 6 ALIGNMENT 0 YS2-5f22.q1k chr03 249 622 151838 151837 F 374 0.00 1196 reject_low 27 ALIGNMENT 61 YS2-5f22.q1k chr03 248 36 124141 124352 C 213 79.81 1196 reject_low 26 ALIGNMENT 0 YS2-5f22.q1k chr14 249 622 525053 525052 F 374 0.00 1196 reject_low 23 ALIGNMENT 0 YS2-5f22.q1k chr06 259 622 143866 143865 F 364 0.00 1196 reject_low 17 ALIGNMENT 0 YS2-5f22.q1k chr14 622 244 726631 726630 C 379 0.00 1196 reject_low 20 ALIGNMENT 0 YS2-5f22.q1k chr04 259 622 1352965 1352964 F 364 0.00 1196 reject_low 5 ALIGNMENT 0 YS2-5f22.q1k chr05 261 622 488162 488161 F 362 0.00 1196 reject_low 3 ALIGNMENT 25 YS2-5f22.q1k chr04 242 193 871760 871810 C 50 88.00 1196 reject_low 31 ALIGNMENT 473 YS2-5f22.q1k chr07 960 258 878289 878982 C 703 90.90 1196 accept 0 ALIGNMENT 0 YS2-5f22.q1k chr06 259 622 138239 138238 F 364 0.00 1196 reject_low 16 ALIGNMENT 44 YS2-5f22.q1k chr03 40 235 149593 149784 F 196 78.06 1196 reject_low 28 ALIGNMENT 186 YS2-5f22.q1k chr06 33 258 143641 143866 F 226 96.02 1196 reject_low 17 ALIGNMENT 0 YS2-5f22.q1k chr15 259 622 976240 976239 F 364 0.00 1196 reject_low 10 ALIGNMENT 0 YS2-5f22.q1k chr07 259 622 811783 811782 F 364 0.00 1196 reject_low 18 ALIGNMENT 201 YS2-5f22.q1k chr04 33 258 877549 877774 F 226 98.23 1196 reject_low 9 ALIGNMENT 0 YS2-5f23.p1k chr10 207 224 78523 78522 F 18 0.00 224 accept 0 ALIGNMENT 156 YS2-5f23.p1k chr10 33 206 78348 78523 F 174 98.28 224 accept 0 ALIGNMENT 855 YS2-5f24.p1k chr15 35 1019 839978 840980 F 985 96.95 1247 accept 0 ALIGNMENT 677 YS2-5f24.q1k chr15 804 1 845382 846180 C 804 96.14 1207 accept 0 ALIGNMENT 911 YS2-5g01.p1k chr06 1049 28 53508 54543 C 1022 97.46 1276 accept 0 ALIGNMENT 313 YS2-5g01.q1k chr06 225 742 50401 50911 F 518 88.03 1470 accept 0 ALIGNMENT 879 YS2-5g02.p1k chr12 1119 25 467750 468858 C 1095 95.25 1370 accept 1 ALIGNMENT 37 YS2-5g02.p1k chr12 69 25 489348 489394 C 45 95.56 1370 reject_low 6 ALIGNMENT 0 YS2-5g02.p1k chr06 62 328 31622 31621 F 267 0.00 1370 reject_low 2 ALIGNMENT 37 YS2-5g02.p1k chr12 69 25 472464 472510 C 45 95.56 1370 reject_low 3 ALIGNMENT 37 YS2-5g02.p1k chr12 69 25 485696 485742 C 45 95.56 1370 reject_low 5 ALIGNMENT 0 YS2-5g02.p1k chr12 768 70 489349 489348 C 699 0.00 1370 reject_low 6 ALIGNMENT 879 YS2-5g02.p1k chr12 1119 25 458613 459721 C 1095 95.25 1370 accept 0 ALIGNMENT 37 YS2-5g02.p1k chr12 69 25 482044 482090 C 45 95.56 1370 reject_low 4 ALIGNMENT 0 YS2-5g02.p1k chr06 437 768 31729 31728 F 332 0.00 1370 reject_low 2 ALIGNMENT 94 YS2-5g02.p1k chr06 329 436 31622 31729 F 108 98.15 1370 reject_low 2 ALIGNMENT 0 YS2-5g02.p1k chr12 768 70 485697 485696 C 699 0.00 1370 reject_low 5 ALIGNMENT 0 YS2-5g02.p1k chr12 768 70 472465 472464 C 699 0.00 1370 reject_low 3 ALIGNMENT 350 YS2-5g02.q1k chr12 51 877 464810 465608 F 827 83.56 1384 accept 1 ALIGNMENT 350 YS2-5g02.q1k chr12 51 877 455673 456471 F 827 83.56 1384 accept 0 ALIGNMENT 0 YS2-5g02.p1k chr12 768 70 482045 482044 C 699 0.00 1370 reject_low 4 ALIGNMENT 481 YS2-5g03.q1k chr15 34 910 732675 733546 F 877 86.32 1304 accept 0 ALIGNMENT 911 YS2-5g03.p1k chr15 1024 26 735110 736111 C 999 98.30 1346 accept 0 ALIGNMENT 623 YS2-5g04.q1k chr14 1010 46 139265 140213 C 965 89.64 1348 accept 0 ALIGNMENT 0 YS2-5g04.p1k chr05 206 62 132600 132599 C 145 0.00 1378 reject_low 1 ALIGNMENT 0 YS2-5g04.p1k chr12 189 62 829451 829450 C 128 0.00 1378 reject_low 2 ALIGNMENT 22 YS2-5g04.p1k chr12 235 190 829405 829450 C 46 91.30 1378 reject_low 2 ALIGNMENT 0 YS2-5g04.p1k chr03 62 194 247928 247927 F 133 0.00 1378 reject_low 3 ALIGNMENT 0 YS2-5g04.p1k chr12 795 236 829406 829405 C 560 0.00 1378 reject_low 2 ALIGNMENT 905 YS2-5g04.p1k chr14 31 1100 135713 136779 F 1070 96.26 1378 accept 0 ALIGNMENT 30 YS2-5g04.p1k chr05 247 207 132559 132599 C 41 95.12 1378 reject_low 1 ALIGNMENT 20 YS2-5g04.p1k chr04 246 219 1229205 1229232 C 28 96.43 1378 reject_low 4 ALIGNMENT 0 YS2-5g04.p1k chr03 239 795 247971 247970 F 557 0.00 1378 reject_low 3 ALIGNMENT 0 YS2-5g04.p1k chr04 218 62 1229233 1229232 C 157 0.00 1378 reject_low 4 ALIGNMENT 23 YS2-5g04.p1k chr03 195 238 247928 247971 F 44 93.18 1378 reject_low 3 ALIGNMENT 0 YS2-5g04.p1k chr04 795 247 1229206 1229205 C 549 0.00 1378 reject_low 4 ALIGNMENT 0 YS2-5g04.p1k chr05 795 248 132560 132559 C 548 0.00 1378 reject_low 1 ALIGNMENT 447 YS2-5g05.q1k chr04 762 54 1466225 1466922 C 709 89.56 1453 accept 0 ALIGNMENT 921 YS2-5g05.p1k chr04 35 1137 1463422 1464536 F 1103 96.37 1377 accept 0 ALIGNMENT 64 YS2-5g06.q1k vc_4 345 261 1450 1534 C 85 92.94 1520 reject_low 9 ALIGNMENT 115 YS2-5g06.q1k vc_4 261 422 126 287 F 162 91.36 1520 reject_low 7 ALIGNMENT 156 YS2-5g06.q1k vc_7 520 261 2473 2727 C 260 88.46 1520 reject_low 5 ALIGNMENT 0 YS2-5g06.q1k vc_4 262 261 5872 6353 F 0 0.00 1520 reject_low 8 ALIGNMENT 20 YS2-5g06.q1k vc_5 258 224 1 35 C 35 85.71 1520 reject_low 14 ALIGNMENT 149 YS2-5g06.q1k vc_4 520 261 5556 5812 C 260 87.69 1520 reject_low 6 ALIGNMENT 156 YS2-5g06.q1k vc_5 261 520 2398 2652 F 260 88.46 1520 reject_low 4 ALIGNMENT 23 YS2-5g06.q1k vc_4 224 261 5834 5871 F 38 86.84 1520 reject_low 8 ALIGNMENT 23 YS2-5g06.q1k vc_2 261 224 2105 2142 C 38 86.84 1520 reject_low 11 ALIGNMENT 156 YS2-5g06.q1k vc_2 261 520 2164 2418 F 260 88.46 1520 reject_low 2 ALIGNMENT 156 YS2-5g06.q1k vc_3 261 520 2531 2785 F 260 88.46 1520 reject_low 3 ALIGNMENT 156 YS2-5g06.q1k vc_1 261 520 2531 2785 F 260 88.46 1520 reject_low 1 ALIGNMENT 131 YS2-5g06.q1k chr05 53 218 87695 87859 F 166 93.37 1520 accept 0 ALIGNMENT 115 YS2-5g06.q1k vc_4 261 422 6353 6514 F 162 91.36 1520|1,0 reject_low 8 ALIGNMENT 23 YS2-5g06.q1k vc_5 261 224 5025 5062 C 38 86.84 1520 reject_low 13 ALIGNMENT 23 YS2-5g06.q1k vc_1 261 224 2472 2509 C 38 86.84 1520 reject_low 10 ALIGNMENT 23 YS2-5g06.q1k vc_3 261 224 2472 2509 C 38 86.84 1520 reject_low 12 ALIGNMENT 656 YS2-5g07.q1k chr15 904 35 995318 996175 C 870 93.22 1333 accept 0 ALIGNMENT 942 YS2-5g07.p1k chr15 37 1121 991966 993060 F 1085 96.87 1428 accept 0 ALIGNMENT 0 YS2-5g08.p1k chr15 62 123 110793 110792 F 62 0.00 1449 reject_low 1 ALIGNMENT 21 YS2-5g08.p1k chr15 124 176 110793 110845 F 53 90.57 1449 reject_low 1 ALIGNMENT 0 YS2-5g08.p1k chr15 177 905 110845 110844 F 729 0.00 1449 reject_low 1 ALIGNMENT 944 YS2-5g08.p1k chr12 35 1092 105328 106394 F 1058 98.11 1449 accept 0 ALIGNMENT 748 YS2-5g08.q1k chr12 999 2 108158 109128 C 998 93.49 1260 accept 0 ALIGNMENT 945 YS2-5g10.p1k chr01 37 1030 87172 88170 F 994 99.09 1363 accept 0 ALIGNMENT 53 YS2-5g10.q1k chr15 269 453 927686 927870 F 185 77.30 1477 reject_low 2 ALIGNMENT 0 YS2-5g10.p1k chr01 62 470 87606 87605 F 409 0.00 1363 reject_low 1 ALIGNMENT 0 YS2-5g10.q1k chr15 62 268 927686 927685 F 207 0.00 1477 reject_low 2 ALIGNMENT 38 YS2-5g10.q1k chr15 573 631 927990 928048 F 59 89.83 1477 reject_low 2 ALIGNMENT 714 YS2-5g10.q1k chr01 978 47 89612 90533 C 932 93.88 1477 accept 0 ALIGNMENT 0 YS2-5g10.q1k chr15 454 572 927871 927989 F 119 0.00 1477 reject_low 2 ALIGNMENT 398 YS2-5g10.p1k chr01 471 881 87606 88016 F 411 99.51 1363 reject_low 1 ALIGNMENT 117 YS2-5g11.p1k chr05 775 959 566695 566880 F 185 90.27 1360|0,5 reject_low 9 ALIGNMENT 252 YS2-5g11.q1k chr08 73 403 4633 4951 F 331 93.96 1397 ambiguous_tel 14 ALIGNMENT 0 YS2-5g11.p1k chr11 774 62 665307 665306 C 713 0.00 1360 reject_low 28 ALIGNMENT 107 YS2-5g11.q1k chr13 550 825 5902 6163 F 276 84.78 1397|1,0 ambiguous_tel 8 ALIGNMENT 0 YS2-5g11.p1k chr03 774 62 4323 4322 C 713 0.00 1360 reject_low 19 ALIGNMENT 0 YS2-5g11.p1k chr11 952 953 665107 665129 C 0 0.00 1360 reject_low 28 ALIGNMENT 53 YS2-5g11.p1k chr03 1049 948 1116 1223 C 102 87.25 1360|0,6 reject_low 18,19 ALIGNMENT 27 YS2-5g11.p1k chr03 991 948 4072 4117 C 44 90.91 1360 reject_low 27 ALIGNMENT 0 YS2-5g11.q1k chr16 552 608 6232 6839 F 57 0.00 1397 ambiguous_tel 13 ALIGNMENT 107 YS2-5g11.q1k chr02 831 550 812549 812815 C 282 84.75 1397 ambiguous_tel 20 ALIGNMENT 406 YS2-5g11.q1k chr14 73 551 5851 6322 F 479 96.03 1397 ambiguous_tel 4 ALIGNMENT 37 YS2-5g11.q1k chr12 155 80 1065785 1065854 C 76 86.84 1397 ambiguous_tel 29 ALIGNMENT 0 YS2-5g11.p1k chr03 907 776 291933 291932 C 132 0.00 1360 reject_low 23 ALIGNMENT 329 YS2-5g11.q1k chr08 551 73 557281 557730 C 479 92.28 1397|1,0 ambiguous_tel 5 ALIGNMENT 400 YS2-5g11.q1k chr12 551 73 1071946 1072412 C 479 96.03 1397 ambiguous_tel 10 ALIGNMENT 0 YS2-5g11.p1k chr03 741 62 291967 291966 C 680 0.00 1360 reject_low 23 ALIGNMENT 320 YS2-5g11.q1k chr06 73 551 3939 4389 F 479 91.65 1397 ambiguous_tel 7 ALIGNMENT 415 YS2-5g11.q1k chr10 73 551 6223 6694 F 479 96.66 1397 ambiguous_tel 3 ALIGNMENT 0 YS2-5g11.q1k chr12 552 593 10902 11684 F 42 0.00 1397 ambiguous_tel 16 ALIGNMENT 0 YS2-5g11.q1k chr07 591 552 1084042 1084645 C 40 0.00 1397 ambiguous_tel 12 ALIGNMENT 0 YS2-5g11.q1k chr05 593 156 569997 570981 C 438 0.00 1397 reject_low 26 ALIGNMENT 0 YS2-5g11.p1k chr05 62 717 566873 566872 F 656 0.00 1360 reject_low 26 ALIGNMENT 69 YS2-5g11.q1k chr12 838 571 1064447 1064705 C 268 80.97 1397 ambiguous_tel 10,29 ALIGNMENT 0 YS2-5g11.p1k chr05 776 907 566931 566930 F 132 0.00 1360 reject_low 26 ALIGNMENT 0 YS2-5g11.p1k chr03 947 62 4118 4117 C 886 0.00 1360 reject_low 27 ALIGNMENT 234 YS2-5g11.q1k chr05 193 551 5895 6226 F 359 91.36 1397 ambiguous_tel 25 ALIGNMENT 0 YS2-5g11.p1k chr05 62 774 566695 566694 F 713 0.00 1360 reject_low 9 ALIGNMENT 400 YS2-5g11.q1k chr15 551 73 1084910 1085376 C 479 96.03 1397 ambiguous_tel 17 ALIGNMENT 400 YS2-5g11.q1k chr04 551 73 1525745 1526211 C 479 96.03 1397 ambiguous_tel 11 ALIGNMENT 69 YS2-5g11.q1k chr04 831 594 1524784 1525013 C 238 82.35 1397 ambiguous_tel 11 ALIGNMENT 0 YS2-5g11.p1k chr08 62 774 7993 7992 F 713 0.00 1360 reject_low 24 ALIGNMENT 65 YS2-5g11.q1k chr12 594 825 11685 11904 F 232 81.47 1397 ambiguous_tel 15,16 ALIGNMENT 58 YS2-5g11.q1k chr15 831 609 1084094 1084301 C 223 81.17 1397 ambiguous_tel 17 ALIGNMENT 0 YS2-5g11.q1k chr12 192 156 1065772 1065784 C 37 0.00 1397 ambiguous_tel 29 ALIGNMENT 0 YS2-5g11.p1k chr03 953 954 1218 4143 C 0 0.00 1360 reject_low 19 ALIGNMENT 0 YS2-5g11.q1k chr04 593 552 1525014 1525744 C 42 0.00 1397 ambiguous_tel 11 ALIGNMENT 0 YS2-5g11.q1k chr12 552 593 5367 11684 F 42 0.00 1397 ambiguous_tel 15 ALIGNMENT 81 YS2-5g11.q1k chr05 831 594 569770 569996 C 238 83.61 1397 reject_low 9,26 ALIGNMENT 39 YS2-5g11.q1k chr05 73 155 5806 5881 F 83 86.75 1397 ambiguous_tel 25 ALIGNMENT 0 YS2-5g11.q1k chr02 549 137 812816 812815 C 413 0.00 1397 ambiguous_tel 20 ALIGNMENT 61 YS2-5g11.q1k chr16 609 831 6840 7047 F 223 81.61 1397 ambiguous_tel 13 ALIGNMENT 415 YS2-5g11.q1k chr09 73 551 6240 6711 F 479 96.66 1397 ambiguous_tel 2 ALIGNMENT 0 YS2-5g11.q1k chr13 551 550 5242 5902 F 0 0.00 1397 ambiguous_tel 8 ALIGNMENT 98 YS2-5g11.p1k chr11 952 775 665130 665306 C 178 87.64 1360 reject_low 28 ALIGNMENT 36 YS2-5g11.p1k chr05 718 775 566873 566931 F 58 89.66 1360 reject_low 26 ALIGNMENT 527 YS2-5g11.q1k chr16 819 73 942549 943275 C 747 92.37 1397 ambiguous_tel 1 ALIGNMENT 0 YS2-5g11.q1k chr08 550 551 556548 557281 C 0 0.00 1397 ambiguous_tel 5 ALIGNMENT 0 YS2-5g11.q1k chr12 570 552 1064706 1065439 C 19 0.00 1397 ambiguous_tel 29 ALIGNMENT 104 YS2-5g11.q1k chr04 550 831 462 728 F 282 84.40 1397 ambiguous_tel 22 ALIGNMENT 0 YS2-5g11.p1k chr03 774 62 1430 1429 C 713 0.00 1360 reject_low 18 ALIGNMENT 32 YS2-5g11.p1k chr05 950 990 566904 566945 F 41 95.12 1360|5,0 reject_low 9 ALIGNMENT 46 YS2-5g11.p1k chr08 775 942 7993 8149 F 168 80.36 1360 reject_low 24 ALIGNMENT 0 YS2-5g11.q1k chr05 156 192 5882 5894 F 37 0.00 1397 ambiguous_tel 25 ALIGNMENT 29 YS2-5g11.p1k chr11 990 953 665068 665106 C 38 94.74 1360 reject_low 28 ALIGNMENT 397 YS2-5g11.q1k chr13 73 551 4777 5242 F 479 96.03 1397|0,1 ambiguous_tel 8 ALIGNMENT 74 YS2-5g11.p1k chr03 955 817 291975 292112 C 139 87.05 1360 reject_low 21 ALIGNMENT 97 YS2-5g11.p1k chr03 959 775 4138 4322 C 185 87.03 1360|6,0 reject_low 19 ALIGNMENT 0 YS2-5g11.q1k chr12 570 552 1064706 1071945 C 19 0.00 1397 ambiguous_tel 10 ALIGNMENT 406 YS2-5g11.q1k chr16 73 551 5760 6231 F 479 96.03 1397 ambiguous_tel 13 ALIGNMENT 0 YS2-5g11.p1k chr03 816 62 292113 292112 C 755 0.00 1360 reject_low 21 ALIGNMENT 0 YS2-5g11.p1k chr05 955 954 566876 566908 F 0 0.00 1360 reject_low 9 ALIGNMENT 934 YS2-5g11.p1k chr07 1096 34 746 1821 C 1063 97.84 1360 accept 0 ALIGNMENT 397 YS2-5g11.q1k chr12 73 551 10436 10901 F 479 96.03 1397 ambiguous_tel 16 ALIGNMENT 26 YS2-5g11.p1k chr03 775 742 291932 291966 C 34 94.12 1360 reject_low 23 ALIGNMENT 0 YS2-5g11.q1k chr05 593 552 569997 570609 C 42 0.00 1397 reject_low 9 ALIGNMENT 0 YS2-5g11.p1k chr03 953 954 1218 1249 C 0 0.00 1360 reject_low 18 ALIGNMENT 231 YS2-5g11.q1k chr12 551 193 1065440 1065771 C 359 91.09 1397 ambiguous_tel 29 ALIGNMENT 79 YS2-5g11.q1k chr08 912 550 556207 556548 C 363 79.89 1397|0,1 ambiguous_tel 5 ALIGNMENT 39 YS2-5g11.q1k chr05 155 73 570982 571057 C 83 86.75 1397 reject_low 9,26 ALIGNMENT 406 YS2-5g11.q1k chr07 551 73 1084646 1085117 C 479 96.03 1397 ambiguous_tel 12 ALIGNMENT 329 YS2-5g11.q1k chr02 73 551 5102 5551 F 479 92.28 1397 ambiguous_tel 6 ALIGNMENT 0 YS2-5g11.q1k chr08 404 550 4951 4950 F 147 0.00 1397 ambiguous_tel 14 ALIGNMENT 397 YS2-5g11.q1k chr12 73 551 4901 5366 F 479 96.03 1397 ambiguous_tel 15 ALIGNMENT 346 YS2-5g11.q1k chr05 551 193 570610 570968 C 359 99.16 1397 reject_low 9 ALIGNMENT 61 YS2-5g11.q1k chr07 819 592 1083826 1084041 C 228 81.58 1397 ambiguous_tel 12 ALIGNMENT 0 YS2-5g11.q1k chr05 192 156 570969 570981 C 37 0.00 1397 reject_low 9 ALIGNMENT 105 YS2-5g11.p1k chr03 959 775 1244 1429 C 185 88.11 1360|6,0 reject_low 18 ALIGNMENT 0 YS2-5g11.q1k chr04 137 549 462 461 F 413 0.00 1397 ambiguous_tel 22 ALIGNMENT 0 YS2-5g11.q1k chr15 608 552 1084302 1084909 C 57 0.00 1397 ambiguous_tel 17 ALIGNMENT 922 YS2-5g12.p1k chr14 33 1054 223588 224620 F 1022 98.04 1393 accept 0 ALIGNMENT 708 YS2-5g12.q1k chr14 832 4 228100 228923 C 829 96.86 1249 accept 0 ALIGNMENT 883 YS2-5g13.q1k chr07 1119 29 872145 873222 C 1091 95.51 1343 accept_chi 1 ALIGNMENT 901 YS2-5g13.p1k chr07 1091 64 872146 873184 C 1028 97.28 1375 accept_chi 0 ALIGNMENT 475 YS2-5g14.q1k chr10 699 50 35983 36622 C 650 92.31 1422 accept 0 ALIGNMENT 889 YS2-5g14.p1k chr10 34 1091 31102 32172 F 1058 95.65 1452 accept 0 ALIGNMENT 953 YS2-5g17.p1k chr11 66 1174 586698 587813 F 1109 96.75 1376 accept 0 ALIGNMENT 939 YS2-5g19.p1k chr04 39 1081 1300042 1301090 F 1043 97.70 1354 accept 0 ALIGNMENT 133 YS2-5g19.q1k chr05 141 411 52950 53218 F 271 83.76 1475 reject_low 1 ALIGNMENT 217 YS2-5g19.q1k chr04 447 141 1301571 1301874 C 307 91.21 1475 accept 0 ALIGNMENT 51 YS2-5g20.q1k vc_7 54 3 6360 6411 C 52 100.00 744|1,0 reject_low 6 ALIGNMENT 77 YS2-5g20.q1k vc_7 416 311 4593 4696 C 106 92.45 744 reject_low 6 ALIGNMENT 379 YS2-5g20.q1k vc_7 564 1 2011 2569 C 564 90.43 744 reject_low 1 ALIGNMENT 0 YS2-5g20.q1k vc_4 308 310 1615 1878 F 3 0.00 744 reject_low 7 ALIGNMENT 275 YS2-5g20.q1k vc_2 1 306 2322 2624 F 306 97.39 744 reject_low 4 ALIGNMENT 47 YS2-5g20.q1k vc_4 307 243 6273 6336 C 65 92.31 744 reject_low 9 ALIGNMENT 0 YS2-5g20.q1k vc_7 310 307 4697 4921 C 4 0.00 744 reject_low 6 ALIGNMENT 0 YS2-5g20.q1k vc_4 62 242 1551 1550 F 181 0.00 744 reject_low 7 ALIGNMENT 275 YS2-5g20.q1k vc_3 1 306 2689 2991 F 306 97.39 744 reject_low 5 ALIGNMENT 47 YS2-5g20.q1k vc_4 307 243 46 109 C 65 92.31 744 reject_low 8 ALIGNMENT 220 YS2-5g20.q1k vc_7 306 53 4922 5172 C 254 96.46 744|0,1 reject_low 6 ALIGNMENT 391 YS2-5g20.q1k vc_5 1 670 2556 3211 F 670 88.36 744 reject_vc 0 ALIGNMENT 0 YS2-5g20.q1k vc_7 53 54 5172 6360 C 0 0.00 744 reject_low 6 ALIGNMENT 0 YS2-5g20.q1k vc_4 242 62 110 109 C 181 0.00 744 reject_low 8 ALIGNMENT 275 YS2-5g20.q1k vc_1 1 306 2689 2991 F 306 97.39 744 reject_low 3 ALIGNMENT 347 YS2-5g20.q1k vc_4 416 1 5242 5654 C 416 95.43 744 reject_low 2 ALIGNMENT 0 YS2-5g20.q1k vc_4 242 62 6337 6336 C 181 0.00 744 reject_low 9 ALIGNMENT 47 YS2-5g20.q1k vc_4 243 307 1551 1614 F 65 92.31 744 reject_low 7 ALIGNMENT 111 YS2-5g20.q1k vc_4 311 670 1879 2227 F 360 80.83 744 reject_low 7 ALIGNMENT 934 YS2-5g22.p1k chr07 77 1139 195007 196077 F 1063 96.90 1411 accept 0 ALIGNMENT 485 YS2-5g23.q1k chr11 887 228 195405 196061 C 660 92.27 1314 accept 0 ALIGNMENT 869 YS2-5g23.p1k chr11 29 1007 194822 195807 F 979 96.94 1246 accept 0 ALIGNMENT 484 YS2-5g24.q1k chr04 773 4 965698 966461 C 770 88.96 1178 accept 0 ALIGNMENT 916 YS2-5g24.p1k chr04 34 1115 965059 966155 F 1082 96.49 1329 accept 0 ALIGNMENT 566 YS2-5h01.q1k chr09 888 2 79895 80770 C 887 90.08 1143 accept 0 ALIGNMENT 899 YS2-5h01.p1k chr09 34 1044 76478 77502 F 1011 97.33 1331 accept 0 ALIGNMENT 375 YS2-5h05.q1k vc_7 551 1 2034 2569 C 551 91.29 1125 reject_vc 1 ALIGNMENT 0 YS2-5h05.q1k vc_7 304 303 4700 4922 C 2 0.00 1125 reject_low 6 ALIGNMENT 0 YS2-5h05.q1k vc_4 62 237 1548 1547 F 176 0.00 1125 reject_low 7 ALIGNMENT 231 YS2-5h05.q1k vc_7 302 53 4923 5172 C 250 97.60 1125|0,1 reject_low 6 ALIGNMENT 338 YS2-5h05.q1k vc_4 426 1 5232 5654 C 426 94.13 1125 reject_low 2 ALIGNMENT 282 YS2-5h05.q1k vc_3 1 302 2689 2990 F 302 98.01 1125 reject_low 5 ALIGNMENT 48 YS2-5h05.q1k vc_7 54 3 6360 6411 C 52 98.08 1125|1,0 reject_low 6 ALIGNMENT 0 YS2-5h05.q1k vc_4 303 310 1613 1881 F 8 0.00 1125 reject_low 7 ALIGNMENT 0 YS2-5h05.q1k vc_4 237 62 6340 6339 C 176 0.00 1125 reject_low 9 ALIGNMENT 62 YS2-5h05.q1k vc_7 426 305 4583 4699 C 122 86.89 1125 reject_low 6 ALIGNMENT 282 YS2-5h05.q1k vc_2 1 302 2322 2623 F 302 98.01 1125 reject_low 4 ALIGNMENT 58 YS2-5h05.q1k vc_4 238 302 1548 1612 F 65 96.92 1125 reject_low 7 ALIGNMENT 0 YS2-5h05.q1k vc_4 237 62 113 112 C 176 0.00 1125 reject_low 8 ALIGNMENT 282 YS2-5h05.q1k vc_1 1 302 2689 2990 F 302 98.01 1125 reject_low 3 ALIGNMENT 58 YS2-5h05.q1k vc_4 302 238 48 112 C 65 96.92 1125 reject_low 8 ALIGNMENT 58 YS2-5h05.q1k vc_4 302 238 6275 6339 C 65 96.92 1125 reject_low 9 ALIGNMENT 0 YS2-5h05.q1k vc_7 53 54 5172 6360 C 0 0.00 1125 reject_low 6 ALIGNMENT 88 YS2-5h05.q1k vc_4 311 551 1882 2107 F 241 83.40 1125 reject_low 7 ALIGNMENT 375 YS2-5h05.q1k vc_5 1 551 2556 3091 F 551 91.29 1125 reject_vc 0 ALIGNMENT 94 YS2-5h06.q1k chr06 270 163 31622 31729 C 108 98.15 1300 reject_low 3 ALIGNMENT 596 YS2-5h06.q1k chr12 4 861 459152 460011 F 858 91.96 1300 manual 1 ALIGNMENT 0 YS2-5h06.q1k chr12 62 529 482044 482043 F 468 0.00 1300 reject_low 6 ALIGNMENT 0 YS2-5h06.q1k chr12 62 529 489348 489347 F 468 0.00 1300 reject_low 4 ALIGNMENT 995 YS2-5h06.p1k chr12 1160 33 176973 178113 C 1128 96.90 1485 accept_chi 0 ALIGNMENT 0 YS2-5h06.q1k chr06 522 271 31623 31622 C 252 0.00 1300 reject_low 3 ALIGNMENT 105 YS2-5h06.q1k chr12 530 658 489348 489476 F 129 93.80 1300 reject_low 4 ALIGNMENT 98 YS2-5h06.q1k chr12 530 648 472464 472582 F 119 94.12 1300 reject_low 5 ALIGNMENT 98 YS2-5h06.q1k chr12 530 648 482044 482162 F 119 94.12 1300 reject_low 6 ALIGNMENT 0 YS2-5h06.q1k chr12 62 529 472464 472463 F 468 0.00 1300 reject_low 5 ALIGNMENT 0 YS2-5h06.q1k chr06 162 62 31730 31729 C 101 0.00 1300 reject_low 3 ALIGNMENT 98 YS2-5h06.q1k chr12 530 648 485696 485814 F 119 94.12 1300 reject_low 7 ALIGNMENT 556 YS2-5h06.q1k chr12 4 648 468289 468930 F 645 96.74 1300 manual 2 ALIGNMENT 0 YS2-5h06.q1k chr12 62 529 485696 485695 F 468 0.00 1300 reject_low 7 ALIGNMENT 226 YS2-5h07.q1k vc_7 302 53 4924 5172 C 250 97.20 1041|0,1 reject_low 6 ALIGNMENT 306 YS2-5h07.q1k vc_5 1 469 2556 3010 F 469 90.62 1041 reject_vc 1 ALIGNMENT 51 YS2-5h07.q1k vc_7 54 3 6360 6411 C 52 100.00 1041|1,0 reject_low 6 ALIGNMENT 0 YS2-5h07.q1k vc_4 237 62 6340 6339 C 176 0.00 1041 reject_low 9 ALIGNMENT 0 YS2-5h07.q1k vc_4 62 237 1548 1547 F 176 0.00 1041 reject_low 8 ALIGNMENT 0 YS2-5h07.q1k vc_4 237 62 113 112 C 176 0.00 1041 reject_low 7 ALIGNMENT 47 YS2-5h07.q1k vc_4 302 238 49 112 C 65 92.31 1041 reject_low 7 ALIGNMENT 281 YS2-5h07.q1k vc_2 1 302 2322 2622 F 302 98.01 1041 reject_low 4 ALIGNMENT 281 YS2-5h07.q1k vc_3 1 302 2689 2989 F 302 98.01 1041 reject_low 5 ALIGNMENT 47 YS2-5h07.q1k vc_4 302 238 6276 6339 C 65 92.31 1041 reject_low 9 ALIGNMENT 281 YS2-5h07.q1k vc_1 1 302 2689 2989 F 302 98.01 1041 reject_low 3 ALIGNMENT 47 YS2-5h07.q1k vc_4 238 302 1548 1611 F 65 92.31 1041 reject_low 8 ALIGNMENT 298 YS2-5h07.q1k vc_4 427 1 5236 5654 C 427 91.80 1041 reject_vc 2 ALIGNMENT 307 YS2-5h07.q1k vc_7 469 1 2115 2569 C 469 90.62 1041 reject_vc 0 ALIGNMENT 0 YS2-5h07.q1k vc_7 53 54 5172 6360 C 0 0.00 1041 reject_low 6 ALIGNMENT 526 YS2-5h09.q1k chr06 652 1 170883 171531 C 652 94.79 1374 accept 0 ALIGNMENT 0 YS2-5h09.p1k chr06 721 739 171545 171544 F 19 0.00 739 accept 0 ALIGNMENT 638 YS2-5h09.p1k chr06 39 720 170864 171545 F 682 98.83 739 accept 0 ALIGNMENT 448 YS2-5h10.q1k chr14 780 69 616433 617138 C 712 88.76 1429 accept 0 ALIGNMENT 551 YS2-5h10.p1k chr14 40 1113 612438 613508 F 1074 84.92 1504 accept 0 ALIGNMENT 1011 YS2-5h11.p1k chr12 32 1133 453391 454503 F 1102 97.82 1479 accept 0 ALIGNMENT 687 YS2-5h11.q1k chr12 865 5 466735 467591 C 861 94.31 1203 accept 1 ALIGNMENT 1011 YS2-5h11.p1k chr12 32 1133 462528 463640 F 1102 97.82 1479 accept 1 ALIGNMENT 687 YS2-5h11.q1k chr12 865 5 457598 458454 C 861 94.31 1203 accept 0 ALIGNMENT 869 YS2-5h12.p1k chr15 1109 83 37470 38510 C 1027 95.42 1477 accept 0 ALIGNMENT 220 YS2-5h13.p1k chr16 353 30 96497 96822 C 324 90.12 1505 reject_low 1 ALIGNMENT 967 YS2-5h13.p1k chr13 30 1166 634145 635296 F 1137 96.57 1505 accept 0 ALIGNMENT 0 YS2-5h13.p1k chr16 842 354 96498 96497 C 489 0.00 1505 reject_low 1 ALIGNMENT 759 YS2-5h13.q1k chr13 990 11 638052 639025 C 980 93.47 1277 accept 0 ALIGNMENT 613 YS2-5h14.q1k chr05 48 779 79988 80712 F 732 95.49 1492 accept 0 ALIGNMENT 996 YS2-5h14.p1k chr05 1110 26 83466 84558 C 1085 97.51 1479 accept 0 ALIGNMENT 705 YS2-5h16.q1k chr13 4 918 369259 370168 F 915 93.33 1242 accept 0 ALIGNMENT 834 YS2-5h16.p1k chr13 958 32 371528 372463 C 927 98.06 1319 accept 0 ALIGNMENT 931 YS2-5h18.p1k chr10 1053 34 191274 192301 C 1020 97.55 1395 accept 0 ALIGNMENT 676 YS2-5h18.q1k chr10 14 937 189435 190350 F 924 92.32 1213 accept 0 ALIGNMENT 155 YS2-5h19.p1k vc_5 1150 917 4785 5025 C 234 90.60 1513 reject_vc 4 ALIGNMENT 155 YS2-5h19.p1k vc_1 1150 917 1865 2105 C 234 90.60 1513 reject_vc 0 ALIGNMENT 155 YS2-5h19.p1k vc_3 1150 917 1865 2105 C 234 90.60 1513 reject_vc 2 ALIGNMENT 0 YS2-5h19.p1k vc_3 916 92 2473 2472 C 825 0.00 1513 reject_low 8 ALIGNMENT 21 YS2-5h19.p1k vc_2 897 917 2144 2164 F 21 100.00 1513 reject_low 10 ALIGNMENT 0 YS2-5h19.p1k vc_7 92 916 100 99 F 825 0.00 1513 reject_vc 5 ALIGNMENT 0 YS2-5h19.p1k vc_1 916 92 2473 2472 C 825 0.00 1513 reject_low 7 ALIGNMENT 26 YS2-5h19.p1k vc_1 947 917 2441 2472 C 31 96.77 1513 reject_low 7 ALIGNMENT 21 YS2-5h19.p1k vc_4 917 897 5812 5832 C 21 100.00 1513 reject_low 12 ALIGNMENT 0 YS2-5h19.p1k vc_4 92 916 5871 5870 F 825 0.00 1513 reject_vc 3 ALIGNMENT 0 YS2-5h19.p1k vc_2 92 896 2144 2143 F 805 0.00 1513 reject_low 10 ALIGNMENT 0 YS2-5h19.p1k vc_2 916 92 2106 2105 C 825 0.00 1513 reject_vc 1 ALIGNMENT 20 YS2-5h19.p1k vc_5 898 917 2379 2398 F 20 100.00 1513 reject_low 14 ALIGNMENT 26 YS2-5h19.p1k vc_3 947 917 2441 2472 C 31 96.77 1513 reject_low 8 ALIGNMENT 155 YS2-5h19.p1k vc_7 917 1150 13562 13802 F 234 90.60 1513 reject_vc 6 ALIGNMENT 155 YS2-5h19.p1k vc_2 1150 917 1865 2105 C 234 90.60 1513 reject_vc 1 ALIGNMENT 0 YS2-5h19.p1k vc_3 916 92 2106 2105 C 825 0.00 1513 reject_vc 2 ALIGNMENT 155 YS2-5h19.p1k vc_4 917 1150 5871 6111 F 234 90.60 1513 reject_vc 3 ALIGNMENT 155 YS2-5h19.p1k vc_7 917 1150 100 340 F 234 90.60 1513 reject_vc 5 ALIGNMENT 21 YS2-5h19.p1k vc_7 917 897 2727 2747 C 21 100.00 1513 reject_low 13 ALIGNMENT 21 YS2-5h19.p1k vc_1 897 917 2511 2531 F 21 100.00 1513 reject_low 9 ALIGNMENT 0 YS2-5h19.p1k vc_4 896 92 5833 5832 C 805 0.00 1513 reject_low 12 ALIGNMENT 0 YS2-5h19.p1k vc_1 916 92 2106 2105 C 825 0.00 1513 reject_vc 0 ALIGNMENT 0 YS2-5h19.p1k vc_5 92 897 2379 2378 F 806 0.00 1513 reject_low 14 ALIGNMENT 0 YS2-5h19.p1k vc_7 92 916 13562 13561 F 825 0.00 1513 reject_vc 6 ALIGNMENT 21 YS2-5h19.p1k vc_3 897 917 2511 2531 F 21 100.00 1513 reject_low 11 ALIGNMENT 0 YS2-5h19.p1k vc_3 92 896 2511 2510 F 805 0.00 1513 reject_low 11 ALIGNMENT 0 YS2-5h19.p1k vc_1 92 896 2511 2510 F 805 0.00 1513 reject_low 9 ALIGNMENT 0 YS2-5h19.p1k vc_5 916 92 5026 5025 C 825 0.00 1513 reject_vc 4 ALIGNMENT 0 YS2-5h19.p1k vc_7 896 92 2748 2747 C 805 0.00 1513 reject_low 13 ALIGNMENT 0 YS2-5h20.p1k chr12 62 290 64978 64977 F 229 0.00 1341 reject_low 7 ALIGNMENT 716 YS2-5h20.p1k chr12 32 1010 63806 64793 F 979 92.03 1341 accept 0 ALIGNMENT 122 YS2-5h20.p1k chr11 518 739 617795 618016 F 222 85.14 1341 reject_low 8 ALIGNMENT 237 YS2-5h20.p1k chr12 291 748 64750 65207 F 458 84.28 1341 reject_low 4 ALIGNMENT 0 YS2-5h20.p1k chr11 62 517 617795 617794 F 456 0.00 1341 reject_low 8 ALIGNMENT 86 YS2-5h20.p1k chr12 969 785 498954 499139 C 185 83.24 1341 reject_low 13 ALIGNMENT 124 YS2-5h20.p1k chr09 738 518 69151 69371 C 221 85.52 1341 reject_low 6 ALIGNMENT 0 YS2-5h20.p1k chr12 62 518 64066 64065 F 457 0.00 1341 reject_low 3 ALIGNMENT 0 YS2-5h20.p1k chr09 882 512 69151 69150 C 371 0.00 1341 reject_low 9 ALIGNMENT 553 YS2-5h20.q1k chr12 843 3 69665 70488 C 841 90.73 1102 accept 0 ALIGNMENT 0 YS2-5h20.p1k chr12 882 748 498950 498949 C 135 0.00 1341 reject_low 12 ALIGNMENT 0 YS2-5h20.p1k chr11 62 290 617796 617795 F 229 0.00 1341 reject_low 10 ALIGNMENT 0 YS2-5h20.p1k chr09 517 62 69372 69371 C 456 0.00 1341 reject_low 6 ALIGNMENT 0 YS2-5h20.p1k chr11 505 882 618009 618008 F 378 0.00 1341 reject_low 10 ALIGNMENT 0 YS2-5h20.p1k chr09 778 62 69339 69338 C 717 0.00 1341 reject_low 14 ALIGNMENT 0 YS2-5h20.p1k chr12 62 290 64294 64293 F 229 0.00 1341 reject_low 2 ALIGNMENT 122 YS2-5h20.p1k chr12 291 520 64978 65207 F 230 84.78 1341 reject_low 7 ALIGNMENT 536 YS2-5h20.p1k chr12 291 974 64522 65207 F 684 93.27 1341 reject_low 1 ALIGNMENT 116 YS2-5h20.p1k chr12 747 520 498949 499176 C 228 83.77 1341 reject_low 12 ALIGNMENT 0 YS2-5h20.p1k chr12 521 882 65207 65206 F 362 0.00 1341 reject_low 7 ALIGNMENT 0 YS2-5h20.p1k chr12 291 62 499177 499176 C 230 0.00 1341 reject_low 12 ALIGNMENT 0 YS2-5h20.p1k chr12 62 746 64066 64065 F 685 0.00 1341 reject_low 5 ALIGNMENT 129 YS2-5h20.p1k chr12 519 292 498949 499176 C 228 85.96 1341 reject_low 12 ALIGNMENT 117 YS2-5h20.p1k chr09 511 291 69150 69370 C 221 84.62 1341 reject_low 9 ALIGNMENT 0 YS2-5h20.p1k chr12 749 882 65207 65206 F 134 0.00 1341 reject_low 4 ALIGNMENT 87 YS2-5h20.p1k chr11 746 955 617795 618004 F 210 80.95 1341 reject_low 11 ALIGNMENT 0 YS2-5h20.p1k chr09 290 62 69371 69370 C 229 0.00 1341 reject_low 9 ALIGNMENT 0 YS2-5h20.p1k chr12 784 62 499140 499139 C 723 0.00 1341 reject_low 13 ALIGNMENT 0 YS2-5h20.p1k chr09 882 739 69152 69151 C 144 0.00 1341 reject_low 6 ALIGNMENT 84 YS2-5h20.p1k chr09 966 779 69150 69338 C 188 82.45 1341 reject_low 14 ALIGNMENT 97 YS2-5h20.p1k chr11 291 504 617796 618009 F 214 82.24 1341 reject_low 10 ALIGNMENT 0 YS2-5h20.p1k chr12 519 520 499177 498948 C 0 0.00 1341 reject_low 12 ALIGNMENT 333 YS2-5h20.p1k chr12 291 978 64294 64983 F 688 83.28 1341 reject_low 2 ALIGNMENT 0 YS2-5h20.p1k chr11 740 882 618016 618015 F 143 0.00 1341 reject_low 8 ALIGNMENT 129 YS2-5h20.p1k chr12 747 1010 64066 64337 F 264 84.47 1341 reject_low 5 ALIGNMENT 255 YS2-5h20.p1k chr12 519 993 64066 64545 F 475 85.26 1341 reject_low 3 ALIGNMENT 0 YS2-5h20.p1k chr12 62 290 64750 64749 F 229 0.00 1341 reject_low 4 ALIGNMENT 0 YS2-5h20.p1k chr12 62 290 64522 64521 F 229 0.00 1341 reject_low 1 ALIGNMENT 0 YS2-5h20.p1k chr11 62 745 617795 617794 F 684 0.00 1341 reject_low 11 ALIGNMENT 0 YS2-5h23.q1k vc_7 451 548 13562 13561 F 98 0.00 1335 reject_low 15 ALIGNMENT 0 YS2-5h23.q1k vc_4 451 450 5872 6353 F 0 0.00 1335 reject_low 9 ALIGNMENT 218 YS2-5h23.q1k vc_2 450 742 2164 2456 F 293 92.49 1335 reject_low 3 ALIGNMENT 0 YS2-5h23.q1k vc_4 107 449 126 125 F 343 0.00 1335 reject_low 8 ALIGNMENT 151 YS2-5h23.q1k vc_4 450 611 126 287 F 162 98.15 1335 reject_low 8 ALIGNMENT 0 YS2-5h23.q1k vc_1 107 449 2531 2530 F 343 0.00 1335 reject_low 2 ALIGNMENT 0 YS2-5h23.q1k vc_2 107 449 2164 2163 F 343 0.00 1335 reject_low 3 ALIGNMENT 0 YS2-5h23.q1k vc_7 107 412 13525 13524 F 306 0.00 1335 reject_low 15 ALIGNMENT 218 YS2-5h23.q1k vc_1 450 742 2531 2823 F 293 92.49 1335 reject_low 2 ALIGNMENT 0 YS2-5h23.q1k vc_4 449 107 1535 1534 C 343 0.00 1335 reject_low 10 ALIGNMENT 0 YS2-5h23.q1k vc_5 548 451 5026 5025 C 98 0.00 1335 reject_low 14 ALIGNMENT 0 YS2-5h23.q1k vc_3 548 451 2473 2472 C 98 0.00 1335 reject_low 13 ALIGNMENT 218 YS2-5h23.q1k vc_7 742 450 2435 2727 C 293 92.49 1335 reject_low 6 ALIGNMENT 41 YS2-5h23.q1k vc_1 450 410 2472 2512 C 41 100.00 1335 reject_low 11 ALIGNMENT 0 YS2-5h23.q1k vc_2 548 451 2106 2105 C 98 0.00 1335 reject_low 12 ALIGNMENT 41 YS2-5h23.q1k vc_2 450 410 2105 2145 C 41 100.00 1335 reject_low 12 ALIGNMENT 36 YS2-5h23.q1k vc_5 447 412 1 36 C 36 100.00 1335 reject_low 16 ALIGNMENT 218 YS2-5h23.q1k vc_5 450 742 2398 2690 F 293 92.49 1335 reject_low 5 ALIGNMENT 211 YS2-5h23.q1k vc_4 742 450 5518 5812 C 293 91.81 1335 reject_low 7 ALIGNMENT 0 YS2-5h23.q1k vc_1 409 107 2513 2512 C 303 0.00 1335 reject_low 11 ALIGNMENT 41 YS2-5h23.q1k vc_4 410 450 5831 5871 F 41 100.00 1335 reject_low 9 ALIGNMENT 0 YS2-5h23.q1k vc_4 107 409 5831 5830 F 303 0.00 1335 reject_low 9 ALIGNMENT 38 YS2-5h23.q1k vc_7 413 450 13525 13562 F 38 100.00 1335 reject_low 15 ALIGNMENT 0 YS2-5h23.q1k vc_5 411 107 5064 5063 C 305 0.00 1335 reject_low 14 ALIGNMENT 0 YS2-5h23.q1k vc_5 107 449 2398 2397 F 343 0.00 1335 reject_low 5 ALIGNMENT 0 YS2-5h23.q1k vc_7 449 107 2728 2727 C 343 0.00 1335 reject_low 6 ALIGNMENT 0 YS2-5h23.p1k chr12 411 395 756484 756483 C 17 0.00 411 accept_chi 1 ALIGNMENT 0 YS2-5h23.q1k vc_5 548 448 2 1 C 101 0.00 1335 reject_low 16 ALIGNMENT 311 YS2-5h23.p1k chr12 394 73 756483 756804 C 322 99.38 411 accept_chi 1 ALIGNMENT 0 YS2-5h23.q1k vc_2 409 107 2146 2145 C 303 0.00 1335 reject_low 12 ALIGNMENT 41 YS2-5h23.q1k vc_3 450 410 2472 2512 C 41 100.00 1335 reject_low 13 ALIGNMENT 218 YS2-5h23.q1k vc_3 450 742 2531 2823 F 293 92.49 1335 reject_low 4 ALIGNMENT 0 YS2-5h23.q1k vc_3 409 107 2513 2512 C 303 0.00 1335 reject_low 13 ALIGNMENT 0 YS2-5h23.q1k vc_4 449 107 5813 5812 C 343 0.00 1335 reject_low 7 ALIGNMENT 0 YS2-5h23.q1k vc_3 107 449 2531 2530 F 343 0.00 1335 reject_low 4 ALIGNMENT 312 YS2-5h23.q1k chr12 57 409 756491 756844 F 353 96.60 1335 accept_chi 0 ALIGNMENT 39 YS2-5h23.q1k vc_5 450 412 5025 5063 C 39 100.00 1335 reject_low 14 ALIGNMENT 0 YS2-5h23.q1k chr12 410 548 756844 756843 F 139 0.00 1335 accept_chi 0 ALIGNMENT 0 YS2-5h23.q1k vc_1 548 451 2473 2472 C 98 0.00 1335 reject_low 11 ALIGNMENT 151 YS2-5h23.q1k vc_4 450 611 6353 6514 F 162 98.15 1335|1,0 reject_low 9 ALIGNMENT 85 YS2-5h23.q1k vc_4 538 450 1446 1534 C 89 98.88 1335 reject_low 10 ALIGNMENT 0 YS2-5h23.q1k vc_5 411 107 37 36 C 305 0.00 1335 reject_low 16 ALIGNMENT 996 YS2-5h24.p1k chr12 32 1144 452998 454123 F 1113 97.21 1362 accept 0 ALIGNMENT 449 YS2-5h24.q1k chr12 838 66 457063 457831 C 773 86.93 1281 reject_low 2 ALIGNMENT 455 YS2-5h24.q1k chr12 886 66 466157 466968 C 821 86.36 1281 accept 0,1 ALIGNMENT 996 YS2-5h24.p1k chr12 32 1144 462135 463260 F 1113 97.21 1362 accept 1 ALIGNMENT 504 YS2-5i01.q1k chr13 626 32 159846 160440 C 595 95.80 1242 accept 0 ALIGNMENT 987 YS2-5i01.p1k chr13 30 1174 155729 156878 F 1145 96.24 1316 accept 0 ALIGNMENT 942 YS2-5i03.q1k chr08 1193 31 75222 76380 C 1163 95.18 1279 accept_chi 0 ALIGNMENT 915 YS2-5i03.p1k chr08 1082 33 75308 76372 C 1050 96.86 1338 accept_chi 1 ALIGNMENT 78 YS2-5i04.p1k chr06 37 144 31622 31729 F 108 92.59 1436 reject_low 2 ALIGNMENT 280 YS2-5i04.q1k chr12 46 434 458311 458687 F 389 92.80 1458 accept 0 ALIGNMENT 280 YS2-5i04.q1k chr12 46 434 467448 467824 F 389 92.80 1458 accept 1 ALIGNMENT 683 YS2-5i04.p1k chr12 1044 34 458443 459418 C 1011 92.28 1436 accept 0 ALIGNMENT 683 YS2-5i04.p1k chr12 1044 34 467580 468555 C 1011 92.28 1436 accept 1 ALIGNMENT 0 YS2-5i04.p1k chr06 145 806 31729 31728 F 662 0.00 1436 reject_low 2 ALIGNMENT 739 YS2-5i05.p1k chr06 854 36 32749 33568 C 819 97.80 1420|5,0 accept 0 ALIGNMENT 241 YS2-5i05.p1k chr06 1225 844 32131 32513 C 382 89.53 1420|0,6 accept 0 ALIGNMENT 600 YS2-5i05.q1k chr01 828 60 219665 220430 C 769 93.24 1378 ambiguous_tel 2 ALIGNMENT 0 YS2-5i05.p1k chr06 849 850 32508 32753 C 0 0.00 1420 accept 0 ALIGNMENT 606 YS2-5i05.q1k chr08 828 60 540276 541041 C 769 93.50 1378 ambiguous_tel 1 ALIGNMENT 879 YS2-5i06.p1k chr01 1095 37 171284 172351 C 1059 96.41 1446 accept 0 ALIGNMENT 477 YS2-5i06.q1k chr01 45 785 166897 167625 F 741 90.96 1455 accept 0 ALIGNMENT 0 YS2-5i07.q1k vc_4 62 237 1548 1547 F 176 0.00 1036 reject_low 9 ALIGNMENT 46 YS2-5i07.q1k vc_4 306 238 6272 6339 C 69 91.30 1036 reject_low 8 ALIGNMENT 0 YS2-5i07.q1k vc_4 237 62 6340 6339 C 176 0.00 1036 reject_low 8 ALIGNMENT 28 YS2-5i07.q1k vc_4 333 516 1905 2083 F 184 76.63 1036 reject_low 9 ALIGNMENT 216 YS2-5i07.q1k vc_7 304 53 4922 5172 C 252 95.63 1036|0,1 reject_low 6 ALIGNMENT 270 YS2-5i07.q1k vc_2 1 304 2322 2624 F 304 96.71 1036 reject_low 4 ALIGNMENT 270 YS2-5i07.q1k vc_1 1 304 2689 2991 F 304 96.71 1036 reject_low 3 ALIGNMENT 46 YS2-5i07.q1k vc_4 238 306 1548 1615 F 69 91.30 1036 reject_low 9 ALIGNMENT 0 YS2-5i07.q1k vc_4 307 332 1616 1904 F 26 0.00 1036 reject_low 9 ALIGNMENT 51 YS2-5i07.q1k vc_7 54 3 6360 6411 C 52 100.00 1036|1,0 reject_low 6 ALIGNMENT 295 YS2-5i07.q1k vc_7 516 1 2058 2569 C 516 87.60 1036 reject_vc 1 ALIGNMENT 270 YS2-5i07.q1k vc_3 1 304 2689 2991 F 304 96.71 1036 reject_low 5 ALIGNMENT 46 YS2-5i07.q1k vc_4 306 238 45 112 C 69 91.30 1036 reject_low 7 ALIGNMENT 295 YS2-5i07.q1k vc_5 1 516 2556 3067 F 516 87.60 1036 reject_vc 0 ALIGNMENT 275 YS2-5i07.q1k vc_4 397 1 5254 5654 C 397 90.68 1036 reject_low 2 ALIGNMENT 0 YS2-5i07.q1k vc_4 237 62 113 112 C 176 0.00 1036 reject_low 7 ALIGNMENT 0 YS2-5i07.q1k vc_7 53 54 5172 6360 C 0 0.00 1036 reject_low 6 ALIGNMENT 47 YS2-5i08.q1k vc_7 818 697 2601 2727 C 122 81.97 1214 reject_low 4 ALIGNMENT 0 YS2-5i08.q1k chr08 407 473 365390 365389 F 67 0.00 1214 reject_low 12 ALIGNMENT 20 YS2-5i08.p1k chr15 312 278 427898 427932 C 35 88.57 737 reject_low 10 ALIGNMENT 582 YS2-5i08.q1k chr15 653 1 182167 182819 C 653 97.40 1214 accept 0 ALIGNMENT 0 YS2-5i08.p1k chr15 277 62 427933 427932 C 216 0.00 737 reject_low 10 ALIGNMENT 0 YS2-5i08.q1k vc_5 62 696 2398 2397 F 635 0.00 1214 reject_low 3 ALIGNMENT 0 YS2-5i08.p1k chr15 737 313 427899 427898 C 425 0.00 737 reject_low 10 ALIGNMENT 0 YS2-5i08.q1k chr15 407 473 427932 427931 F 67 0.00 1214 reject_low 9 ALIGNMENT 0 YS2-5i08.q1k vc_3 62 696 2531 2530 F 635 0.00 1214 reject_low 2 ALIGNMENT 22 YS2-5i08.q1k chr08 384 406 365368 365390 F 23 100.00 1214 reject_low 12 ALIGNMENT 0 YS2-5i08.p1k chr15 720 737 182854 182853 F 18 0.00 737 accept 0 ALIGNMENT 24 YS2-5i08.q1k vc_5 695 663 5027 5059 C 33 90.91 1214 reject_low 7 ALIGNMENT 47 YS2-5i08.q1k vc_1 697 818 2531 2657 F 122 81.97 1214 reject_low 1 ALIGNMENT 23 YS2-5i08.q1k vc_5 694 663 1 32 C 32 90.62 1214 reject_low 8 ALIGNMENT 47 YS2-5i08.q1k vc_5 697 818 2398 2524 F 122 81.97 1214 reject_low 3 ALIGNMENT 24 YS2-5i08.q1k vc_3 695 663 2474 2506 C 33 90.91 1214 reject_low 6 ALIGNMENT 0 YS2-5i08.q1k chr15 62 371 427898 427897 F 310 0.00 1214 reject_low 9 ALIGNMENT 0 YS2-5i08.q1k vc_5 662 62 5060 5059 C 601 0.00 1214 reject_low 7 ALIGNMENT 24 YS2-5i08.q1k vc_1 695 663 2474 2506 C 33 90.91 1214 reject_low 5 ALIGNMENT 22 YS2-5i08.p1k chr08 300 278 365368 365390 C 23 100.00 737 reject_low 11 ALIGNMENT 0 YS2-5i08.q1k vc_3 662 62 2507 2506 C 601 0.00 1214 reject_low 6 ALIGNMENT 0 YS2-5i08.p1k chr08 737 301 365369 365368 C 437 0.00 737 reject_low 11 ALIGNMENT 0 YS2-5i08.p1k chr08 277 62 365391 365390 C 216 0.00 737 reject_low 11 ALIGNMENT 0 YS2-5i08.q1k vc_5 662 62 33 32 C 601 0.00 1214 reject_low 8 ALIGNMENT 0 YS2-5i08.q1k vc_1 62 696 2531 2530 F 635 0.00 1214 reject_low 1 ALIGNMENT 47 YS2-5i08.q1k vc_3 697 818 2531 2657 F 122 81.97 1214 reject_low 2 ALIGNMENT 649 YS2-5i08.p1k chr15 31 719 182165 182854 F 689 99.27 737 accept 0 ALIGNMENT 0 YS2-5i08.q1k chr08 62 383 365368 365367 F 322 0.00 1214 reject_low 12 ALIGNMENT 0 YS2-5i08.q1k vc_1 662 62 2507 2506 C 601 0.00 1214 reject_low 5 ALIGNMENT 0 YS2-5i08.q1k vc_7 696 62 2728 2727 C 635 0.00 1214 reject_low 4 ALIGNMENT 20 YS2-5i08.q1k chr15 372 406 427898 427932 F 35 88.57 1214 reject_low 9 ALIGNMENT 587 YS2-5i09.q1k chr08 804 51 414814 415561 C 754 93.77 1459 accept 0 ALIGNMENT 34 YS2-5i10.p1k chr16 240 307 123573 123640 F 68 83.82 1435 reject_low 1 ALIGNMENT 38 YS2-5i10.p1k chr16 484 581 123826 123923 F 98 80.61 1435 reject_low 1 ALIGNMENT 0 YS2-5i10.p1k chr16 308 483 123641 123825 F 176 0.00 1435 reject_low 1 ALIGNMENT 903 YS2-5i10.p1k chr12 31 1056 637956 638996 F 1026 96.98 1435 accept 0 ALIGNMENT 0 YS2-5i10.p1k chr16 582 789 123923 123922 F 208 0.00 1435 reject_low 1 ALIGNMENT 0 YS2-5i10.p1k chr16 62 239 123573 123572 F 178 0.00 1435 reject_low 1 ALIGNMENT 472 YS2-5i10.q1k chr12 882 53 642360 643172 C 830 87.83 1389 accept 0 ALIGNMENT 25 YS2-5i11.q1k chr12 120 54 465048 465113 C 67 80.60 1447 reject_bad_break 0 reject_low 1 ALIGNMENT 57 YS2-5i11.q1k vc_3 384 482 2531 2627 F 99 87.88 1447 reject_low 5 ALIGNMENT 0 YS2-5i11.q1k vc_4 182 342 5831 5830 F 161 0.00 1447 reject_low 10 ALIGNMENT 37 YS2-5i11.q1k vc_5 384 340 5025 5068 C 45 95.56 1447 reject_low 11 ALIGNMENT 0 YS2-5i11.q1k vc_3 342 182 2513 2512 C 161 0.00 1447 reject_low 14 ALIGNMENT 0 YS2-5i11.p1k chr12 316 333 455976 455975 F 18 0.00 333 reject_bad_break 0 ALIGNMENT 0 YS2-5i11.q1k vc_2 182 383 2164 2163 F 202 0.00 1447 reject_low 4 ALIGNMENT 57 YS2-5i11.q1k vc_1 384 482 2531 2627 F 99 87.88 1447 reject_low 3 ALIGNMENT 0 YS2-5i11.q1k vc_1 182 383 2531 2530 F 202 0.00 1447 reject_low 3 ALIGNMENT 57 YS2-5i11.q1k vc_5 384 482 2398 2494 F 99 87.88 1447 reject_low 8 ALIGNMENT 37 YS2-5i11.q1k vc_4 343 384 5831 5871 F 42 97.62 1447 reject_low 10 ALIGNMENT 168 YS2-5i11.q1k chr12 337 146 464845 465035 C 192 96.35 1447 reject_bad_break 0 ALIGNMENT 0 YS2-5i11.q1k vc_1 342 182 2513 2512 C 161 0.00 1447 reject_low 12 ALIGNMENT 52 YS2-5i11.q1k vc_4 473 384 1446 1534 C 90 87.78 1447 reject_low 9 ALIGNMENT 0 YS2-5i11.q1k vc_7 182 345 13525 13524 F 164 0.00 1447 reject_low 16 ALIGNMENT 57 YS2-5i11.q1k vc_4 384 482 126 222 F 99 87.88 1447 reject_low 6 ALIGNMENT 0 YS2-5i11.q1k vc_4 182 383 126 125 F 202 0.00 1447 reject_low 6 ALIGNMENT 0 YS2-5i11.q1k chr12 145 121 465036 465047 C 25 0.00 1447 reject_bad_break 0 ALIGNMENT 0 YS2-5i11.q1k vc_5 339 182 5069 5068 C 158 0.00 1447 reject_low 11 ALIGNMENT 0 YS2-5i11.q1k vc_4 383 182 1535 1534 C 202 0.00 1447 reject_low 9 ALIGNMENT 0 YS2-5i11.p1k chr12 316 333 465113 465112 F 18 0.00 333 reject_low 1 ALIGNMENT 57 YS2-5i11.q1k vc_4 482 384 5716 5812 C 99 87.88 1447 reject_low 7 ALIGNMENT 0 YS2-5i11.q1k vc_4 385 384 5872 6353 F 0 0.00 1447 reject_low 10 ALIGNMENT 0 YS2-5i11.q1k vc_2 342 182 2146 2145 C 161 0.00 1447 reject_low 13 ALIGNMENT 0 YS2-5i11.q1k chr12 231 121 465049 465048 C 111 0.00 1447 reject_low 1 ALIGNMENT 57 YS2-5i11.q1k vc_2 384 482 2164 2260 F 99 87.88 1447 reject_low 4 ALIGNMENT 37 YS2-5i11.q1k vc_3 384 343 2472 2512 C 42 97.62 1447 reject_low 14 ALIGNMENT 25 YS2-5i11.q1k chr12 120 54 455911 455976 C 67 80.60 1447 reject_low 2 ALIGNMENT 34 YS2-5i11.q1k vc_7 346 384 13525 13562 F 39 97.44 1447 reject_low 16 ALIGNMENT 0 YS2-5i11.q1k chr12 145 121 455899 455910 C 25 0.00 1447 reject_low 2 ALIGNMENT 0 YS2-5i11.q1k vc_3 182 383 2531 2530 F 202 0.00 1447 reject_low 5 ALIGNMENT 212 YS2-5i11.p1k chr12 74 315 464878 465113 F 242 97.52 333 reject_low 1 ALIGNMENT 212 YS2-5i11.p1k chr12 74 315 455741 455976 F 242 97.52 333 reject_bad_break 0 ALIGNMENT 0 YS2-5i11.q1k vc_5 339 182 42 41 C 158 0.00 1447 reject_low 15 ALIGNMENT 34 YS2-5i11.q1k vc_5 381 340 1 41 C 42 95.24 1447 reject_low 15 ALIGNMENT 0 YS2-5i11.q1k vc_5 182 383 2398 2397 F 202 0.00 1447 reject_low 8 ALIGNMENT 57 YS2-5i11.q1k vc_4 384 482 6353 6449 F 99 87.88 1447|1,0 reject_low 10 ALIGNMENT 37 YS2-5i11.q1k vc_1 384 343 2472 2512 C 42 97.62 1447 reject_low 12 ALIGNMENT 168 YS2-5i11.q1k chr12 337 146 455708 455898 C 192 96.35 1447 reject_low 2 ALIGNMENT 0 YS2-5i11.q1k vc_4 383 182 5813 5812 C 202 0.00 1447 reject_low 7 ALIGNMENT 37 YS2-5i11.q1k vc_2 384 343 2105 2145 C 42 97.62 1447 reject_low 13 ALIGNMENT 87 YS2-5i12.p1k chr03 470 586 162940 163056 F 117 92.31 1431 reject_low 1 ALIGNMENT 912 YS2-5i12.p1k chr05 29 1039 122359 123377 F 1011 98.32 1431 accept 0 ALIGNMENT 0 YS2-5i12.p1k chr03 62 469 162940 162939 F 408 0.00 1431 reject_low 1 ALIGNMENT 0 YS2-5i12.p1k chr03 587 857 163056 163055 F 271 0.00 1431 reject_low 1 ALIGNMENT 687 YS2-5i12.q1k chr05 947 48 125547 126438 C 900 93.33 1426 accept 0 ALIGNMENT 579 YS2-5i15.q1k chr02 743 27 630966 631680 C 717 94.42 1328 accept 0 ALIGNMENT 938 YS2-5i15.p1k chr02 30 1128 627409 628510 F 1099 96.09 1388 accept 0 ALIGNMENT 0 YS2-5i16.q1k vc_7 328 508 13562 13561 F 181 0.00 1147 reject_low 17 ALIGNMENT 0 YS2-5i16.q1k vc_5 288 62 37 36 C 227 0.00 1147 reject_low 18 ALIGNMENT 41 YS2-5i16.q1k vc_4 287 327 5831 5871 F 41 100.00 1147 reject_low 9 ALIGNMENT 36 YS2-5i16.q1k vc_5 324 289 1 36 C 36 100.00 1147 reject_low 18 ALIGNMENT 0 YS2-5i16.q1k vc_4 328 327 5872 6353 F 0 0.00 1147 reject_low 9 ALIGNMENT 0 YS2-5i16.q1k vc_5 62 326 2398 2397 F 265 0.00 1147 reject_vc 2 ALIGNMENT 0 YS2-5i16.q1k vc_4 62 286 5831 5830 F 225 0.00 1147 reject_low 9 ALIGNMENT 0 YS2-5i16.q1k vc_7 537 538 5172 6360 C 0 0.00 1147 reject_low 10 ALIGNMENT 0 YS2-5i16.p1k chr01 412 429 186454 186453 F 18 0.00 429 accept_chi 0 ALIGNMENT 0 YS2-5i16.q1k vc_2 508 328 2106 2105 C 181 0.00 1147 reject_low 13 ALIGNMENT 0 YS2-5i16.q1k vc_5 288 62 5064 5063 C 227 0.00 1147 reject_low 15 ALIGNMENT 0 YS2-5i16.q1k vc_2 286 62 2146 2145 C 225 0.00 1147 reject_low 13 ALIGNMENT 0 YS2-5i16.q1k vc_4 508 416 1447 1446 C 93 0.00 1147 reject_low 11 ALIGNMENT 232 YS2-5i16.p1k chr01 46 411 186094 186454 F 366 89.07 429 accept_chi 0 ALIGNMENT 341 YS2-5i16.q1k vc_7 875 327 2193 2727 C 549 89.62 1147 reject_vc 3 ALIGNMENT 0 YS2-5i16.q1k vc_2 62 326 2164 2163 F 265 0.00 1147 reject_vc 6 ALIGNMENT 0 YS2-5i16.q1k vc_3 286 62 2513 2512 C 225 0.00 1147 reject_low 14 ALIGNMENT 0 YS2-5i16.q1k vc_7 62 289 63 62 F 228 0.00 1147 reject_low 16 ALIGNMENT 41 YS2-5i16.q1k vc_3 327 287 2472 2512 C 41 100.00 1147 reject_low 14 ALIGNMENT 0 YS2-5i16.q1k vc_4 489 508 6514 6513 F 20 0.00 1147 reject_low 9 ALIGNMENT 0 YS2-5i16.q1k vc_5 508 325 2 1 C 184 0.00 1147 reject_low 18 ALIGNMENT 334 YS2-5i16.q1k vc_4 875 327 5276 5812 C 549 89.25 1147 reject_vc 4 ALIGNMENT 38 YS2-5i16.q1k vc_7 290 327 63 100 F 38 100.00 1147 reject_low 16 ALIGNMENT 156 YS2-5i16.q1k vc_4 327 488 126 287 F 162 99.38 1147 reject_low 8 ALIGNMENT 0 YS2-5i16.q1k vc_4 326 62 5813 5812 C 265 0.00 1147 reject_vc 4 ALIGNMENT 0 YS2-5i16.q1k vc_5 508 328 5026 5025 C 181 0.00 1147 reject_low 15 ALIGNMENT 0 YS2-5i16.q1k vc_4 62 326 126 125 F 265 0.00 1147 reject_low 8 ALIGNMENT 0 YS2-5i16.q1k vc_7 328 508 100 99 F 181 0.00 1147 reject_low 16 ALIGNMENT 0 YS2-5i16.q1k vc_1 508 328 2473 2472 C 181 0.00 1147 reject_low 12 ALIGNMENT 39 YS2-5i16.q1k vc_5 327 289 5025 5063 C 39 100.00 1147 reject_low 15 ALIGNMENT 156 YS2-5i16.q1k vc_4 327 488 6353 6514 F 162 99.38 1147|1,0 reject_low 9 ALIGNMENT 0 YS2-5i16.q1k vc_3 62 326 2531 2530 F 265 0.00 1147 reject_vc 7 ALIGNMENT 0 YS2-5i16.q1k vc_7 326 62 2728 2727 C 265 0.00 1147 reject_vc 3 ALIGNMENT 0 YS2-5i16.q1k vc_1 62 326 2531 2530 F 265 0.00 1147 reject_vc 5 ALIGNMENT 0 YS2-5i16.q1k vc_4 489 508 287 286 F 20 0.00 1147 reject_low 8 ALIGNMENT 121 YS2-5i16.q1k vc_7 795 537 4924 5172 C 259 84.94 1147|0,1 reject_low 10 ALIGNMENT 0 YS2-5i16.q1k vc_1 286 62 2513 2512 C 225 0.00 1147 reject_low 12 ALIGNMENT 325 YS2-5i16.q1k vc_1 327 795 2531 2989 F 469 91.47 1147 reject_vc 5 ALIGNMENT 41 YS2-5i16.q1k vc_2 327 287 2105 2145 C 41 100.00 1147 reject_low 13 ALIGNMENT 0 YS2-5i16.q1k vc_3 508 328 2473 2472 C 181 0.00 1147 reject_low 14 ALIGNMENT 0 YS2-5i16.q1k chr01 508 272 186095 186094 C 237 0.00 1147 accept_chi 1 ALIGNMENT 41 YS2-5i16.q1k vc_1 327 287 2472 2512 C 41 100.00 1147 reject_low 12 ALIGNMENT 0 YS2-5i16.q1k vc_4 326 62 1535 1534 C 265 0.00 1147 reject_low 11 ALIGNMENT 341 YS2-5i16.q1k vc_5 327 875 2398 2932 F 549 89.62 1147 reject_vc 2 ALIGNMENT 325 YS2-5i16.q1k vc_2 327 795 2164 2622 F 469 91.47 1147 reject_vc 6 ALIGNMENT 0 YS2-5i16.q1k vc_7 62 289 13525 13524 F 228 0.00 1147 reject_low 17 ALIGNMENT 152 YS2-5i16.q1k chr01 271 10 186094 186350 C 262 87.40 1147 accept_chi 1 ALIGNMENT 87 YS2-5i16.q1k vc_4 415 327 1446 1534 C 89 100.00 1147 reject_low 11 ALIGNMENT 38 YS2-5i16.q1k vc_7 290 327 13525 13562 F 38 100.00 1147 reject_low 17 ALIGNMENT 47 YS2-5i16.q1k vc_7 538 487 6360 6411 C 52 98.08 1147|1,0 reject_low 10 ALIGNMENT 325 YS2-5i16.q1k vc_3 327 795 2531 2989 F 469 91.47 1147 reject_vc 7 ALIGNMENT 0 YS2-5i16.q1k vc_7 486 62 6412 6411 C 425 0.00 1147 reject_low 10 ALIGNMENT 0 YS2-5i17.p1k chr02 607 622 323168 323167 F 16 0.00 622 accept 0 ALIGNMENT 541 YS2-5i17.p1k chr02 28 606 322589 323168 F 579 98.79 622 accept 0 ALIGNMENT 590 YS2-5i19.q1k chr01 870 29 121839 122674 C 842 91.57 1251 accept 0 ALIGNMENT 898 YS2-5i19.p1k chr01 29 1099 119250 120332 F 1071 96.17 1347 accept 0 ALIGNMENT 835 YS2-5i20.p1k chr01 76 1136 119300 120367 F 1061 94.34 1473 accept 0 ALIGNMENT 0 YS2-5i21.p1k chr05 368 385 356857 356856 F 18 0.00 385 accept 0 ALIGNMENT 309 YS2-5i21.p1k chr05 30 367 356518 356857 F 338 98.82 385 accept 0 ALIGNMENT 0 YS2-5i22.q1k vc_7 53 54 5172 6360 C 0 0.00 747 reject_vc 7 ALIGNMENT 0 YS2-5i22.p1k chr05 368 385 356857 356856 F 18 0.00 385 accept 0 ALIGNMENT 148 YS2-5i22.q1k vc_7 235 1 2336 2569 C 235 88.51 747 reject_vc 5 ALIGNMENT 141 YS2-5i22.q1k vc_4 235 1 5419 5654 C 235 87.66 747 reject_vc 6 ALIGNMENT 96 YS2-5i22.q1k vc_7 235 53 4991 5172 C 183 85.25 747|0,1 reject_vc 7 ALIGNMENT 48 YS2-5i22.q1k vc_7 54 3 6360 6411 C 52 98.08 747|1,0 reject_vc 7 ALIGNMENT 148 YS2-5i22.q1k vc_3 1 235 2689 2922 F 235 88.51 747 reject_vc 3 ALIGNMENT 148 YS2-5i22.q1k vc_2 1 235 2322 2555 F 235 88.51 747 reject_vc 2 ALIGNMENT 148 YS2-5i22.q1k vc_1 1 235 2689 2922 F 235 88.51 747 reject_vc 1 ALIGNMENT 315 YS2-5i22.p1k chr05 30 367 356519 356857 F 338 99.41 385 accept 0 ALIGNMENT 148 YS2-5i22.q1k vc_5 1 235 2556 2789 F 235 88.51 747 reject_vc 4 ALIGNMENT 952 YS2-5j01.p1k chr04 1175 32 1500718 1501866 C 1144 95.63 1415 accept 0 ALIGNMENT 418 YS2-5j01.q1k chr04 48 770 1500536 1501250 F 723 88.38 1307 accept 0 ALIGNMENT 346 YS2-5j02.q1k chr12 532 6 451420 451955 C 527 90.13 1245 reject_low 2 ALIGNMENT 1004 YS2-5j02.p1k chr12 34 1166 455589 456717 F 1133 96.91 1421 accept 0 ALIGNMENT 1004 YS2-5j02.p1k chr12 34 1166 464726 465854 F 1133 96.91 1421 reject_low 1 ALIGNMENT 401 YS2-5j02.q1k chr12 694 6 460396 461092 C 689 87.95 1245 accept 0 ALIGNMENT 41 YS2-5j04.q1k vc_1 502 462 2472 2512 C 41 100.00 1412 reject_low 11 ALIGNMENT 225 YS2-5j04.q1k vc_2 502 886 2164 2543 F 385 87.53 1412 reject_low 3 ALIGNMENT 0 YS2-5j04.q1k vc_2 461 92 2146 2145 C 370 0.00 1412 reject_low 12 ALIGNMENT 0 YS2-5j04.q1k vc_1 461 92 2513 2512 C 370 0.00 1412 reject_low 11 ALIGNMENT 38 YS2-5j04.q1k vc_7 465 502 13525 13562 F 38 100.00 1412 reject_low 16 ALIGNMENT 0 YS2-5j04.q1k vc_3 92 501 2531 2530 F 410 0.00 1412 reject_low 4 ALIGNMENT 0 YS2-5j04.q1k vc_1 581 503 2473 2472 C 79 0.00 1412 reject_low 11 ALIGNMENT 0 YS2-5j04.q1k vc_3 581 503 2473 2472 C 79 0.00 1412 reject_low 13 ALIGNMENT 0 YS2-5j04.q1k vc_2 581 503 2106 2105 C 79 0.00 1412 reject_low 12 ALIGNMENT 378 YS2-5j04.q1k chr07 461 30 789127 789557 C 432 96.99 1412 accept_chi 1 ALIGNMENT 0 YS2-5j04.q1k vc_5 463 92 5064 5063 C 372 0.00 1412 reject_low 14 ALIGNMENT 86 YS2-5j04.q1k vc_4 588 502 1448 1534 C 87 100.00 1412 reject_low 10 ALIGNMENT 225 YS2-5j04.q1k vc_5 502 886 2398 2777 F 385 87.53 1412 reject_low 5 ALIGNMENT 395 YS2-5j04.p1k chr07 34 466 789127 789557 F 433 98.38 484 accept_chi 0 ALIGNMENT 0 YS2-5j04.q1k vc_2 92 501 2164 2163 F 410 0.00 1412 reject_low 3 ALIGNMENT 0 YS2-5j04.q1k vc_4 503 502 5872 6353 F 0 0.00 1412 reject_low 9 ALIGNMENT 38 YS2-5j04.q1k vc_7 465 502 63 100 F 38 100.00 1412 reject_low 15 ALIGNMENT 0 YS2-5j04.q1k vc_5 92 501 2398 2397 F 410 0.00 1412 reject_low 5 ALIGNMENT 39 YS2-5j04.q1k vc_5 502 464 5025 5063 C 39 100.00 1412 reject_low 14 ALIGNMENT 0 YS2-5j04.q1k vc_3 461 92 2513 2512 C 370 0.00 1412 reject_low 13 ALIGNMENT 0 YS2-5j04.q1k vc_5 463 92 37 36 C 372 0.00 1412 reject_low 17 ALIGNMENT 0 YS2-5j04.q1k vc_4 501 92 1535 1534 C 410 0.00 1412 reject_low 10 ALIGNMENT 0 YS2-5j04.q1k vc_4 92 461 5831 5830 F 370 0.00 1412 reject_low 9 ALIGNMENT 145 YS2-5j04.q1k vc_4 502 663 6353 6514 F 162 96.91 1412|1,0 reject_low 9 ALIGNMENT 0 YS2-5j04.q1k vc_5 581 503 5026 5025 C 79 0.00 1412 reject_low 14 ALIGNMENT 0 YS2-5j04.q1k vc_5 581 500 2 1 C 82 0.00 1412 reject_low 17 ALIGNMENT 41 YS2-5j04.q1k vc_3 502 462 2472 2512 C 41 100.00 1412 reject_low 13 ALIGNMENT 0 YS2-5j04.q1k vc_7 501 92 2728 2727 C 410 0.00 1412 reject_low 6 ALIGNMENT 41 YS2-5j04.q1k vc_2 502 462 2105 2145 C 41 100.00 1412 reject_low 12 ALIGNMENT 0 YS2-5j04.q1k vc_1 92 501 2531 2530 F 410 0.00 1412 reject_low 2 ALIGNMENT 0 YS2-5j04.p1k chr07 467 484 789557 789556 F 18 0.00 484 accept_chi 0 ALIGNMENT 0 YS2-5j04.q1k vc_7 92 464 63 62 F 373 0.00 1412 reject_low 15 ALIGNMENT 0 YS2-5j04.q1k chr07 581 462 789128 789127 C 120 0.00 1412 accept_chi 1 ALIGNMENT 145 YS2-5j04.q1k vc_4 502 663 126 287 F 162 96.91 1412 reject_low 8 ALIGNMENT 41 YS2-5j04.q1k vc_4 462 502 5831 5871 F 41 100.00 1412 reject_low 9 ALIGNMENT 225 YS2-5j04.q1k vc_7 886 502 2348 2727 C 385 87.53 1412 reject_low 6 ALIGNMENT 36 YS2-5j04.q1k vc_5 499 464 1 36 C 36 100.00 1412 reject_low 17 ALIGNMENT 0 YS2-5j04.q1k vc_7 92 464 13525 13524 F 373 0.00 1412 reject_low 16 ALIGNMENT 0 YS2-5j04.q1k vc_4 92 501 126 125 F 410 0.00 1412 reject_low 8 ALIGNMENT 225 YS2-5j04.q1k vc_1 502 886 2531 2910 F 385 87.53 1412 reject_low 2 ALIGNMENT 225 YS2-5j04.q1k vc_3 502 886 2531 2910 F 385 87.53 1412 reject_low 4 ALIGNMENT 0 YS2-5j04.q1k vc_4 501 92 5813 5812 C 410 0.00 1412 reject_low 7 ALIGNMENT 0 YS2-5j04.q1k vc_7 503 581 100 99 F 79 0.00 1412 reject_low 15 ALIGNMENT 218 YS2-5j04.q1k vc_4 886 502 5431 5812 C 385 87.01 1412 reject_low 7 ALIGNMENT 0 YS2-5j04.q1k vc_7 503 581 13562 13561 F 79 0.00 1412 reject_low 16 ALIGNMENT 97 YS2-5j06.q1k chr12 303 181 489348 489469 C 123 93.50 1246 reject_low 2 ALIGNMENT 311 YS2-5j06.q1k chr12 686 184 468432 468930 C 503 88.67 1246 reject_low 1 ALIGNMENT 0 YS2-5j06.q1k chr12 183 92 468931 468930 C 92 0.00 1246 reject_low 1 ALIGNMENT 0 YS2-5j06.q1k chr12 183 92 472583 472582 C 92 0.00 1246 reject_low 3 ALIGNMENT 404 YS2-5j06.q1k chr12 686 20 459295 459965 C 667 88.31 1246 accept 0 ALIGNMENT 0 YS2-5j06.q1k chr12 183 92 485815 485814 C 92 0.00 1246 reject_low 5 ALIGNMENT 94 YS2-5j06.q1k chr12 303 184 485696 485814 C 120 93.33 1246 reject_low 5 ALIGNMENT 94 YS2-5j06.q1k chr12 303 184 472464 472582 C 120 93.33 1246 reject_low 3 ALIGNMENT 0 YS2-5j06.q1k chr12 183 92 482163 482162 C 92 0.00 1246 reject_low 4 ALIGNMENT 94 YS2-5j06.q1k chr12 303 184 482044 482162 C 120 93.33 1246 reject_low 4 ALIGNMENT 961 YS2-5j06.p1k chr12 35 1074 465091 466143 F 1040 98.17 1393 reject_low 1 ALIGNMENT 0 YS2-5j06.q1k chr12 180 92 489470 489469 C 89 0.00 1246 reject_low 2 ALIGNMENT 961 YS2-5j06.p1k chr12 35 1074 455954 457006 F 1040 98.17 1393 accept 0 ALIGNMENT 183 YS2-5j07.q1k vc_2 1 273 2322 2591 F 273 90.11 918 reject_low 4 ALIGNMENT 183 YS2-5j07.q1k vc_3 1 273 2689 2958 F 273 90.11 918 reject_low 5 ALIGNMENT 189 YS2-5j07.q1k vc_5 1 373 2556 2919 F 373 85.52 918 reject_vc 0 ALIGNMENT 128 YS2-5j07.q1k vc_7 273 53 4955 5172 C 221 87.33 918|0,1 reject_low 6 ALIGNMENT 51 YS2-5j07.q1k vc_7 54 3 6360 6411 C 52 100.00 918|1,0 reject_low 6 ALIGNMENT 0 YS2-5j07.q1k vc_7 53 54 5172 6360 C 0 0.00 918 reject_low 6 ALIGNMENT 189 YS2-5j07.q1k vc_7 373 1 2206 2569 C 373 85.52 918 reject_vc 1 ALIGNMENT 183 YS2-5j07.q1k vc_1 1 273 2689 2958 F 273 90.11 918 reject_low 3 ALIGNMENT 182 YS2-5j07.q1k vc_4 373 1 5289 5654 C 373 84.99 918 reject_vc 2 ALIGNMENT 0 YS2-5j10.q1k vc_2 62 424 2164 2163 F 363 0.00 1265 reject_low 7 ALIGNMENT 41 YS2-5j10.q1k vc_1 425 385 2472 2512 C 41 100.00 1265 reject_low 15 ALIGNMENT 0 YS2-5j10.p1k chr12 440 424 459141 459140 C 17 0.00 440 reject_low 1 ALIGNMENT 0 YS2-5j10.p1k chr06 256 440 31729 31728 F 185 0.00 440 reject_low 9 ALIGNMENT 41 YS2-5j10.q1k vc_3 425 385 2472 2512 C 41 100.00 1265 reject_low 17 ALIGNMENT 0 YS2-5j10.q1k vc_7 62 387 63 62 F 326 0.00 1265 reject_low 19 ALIGNMENT 0 YS2-5j10.q1k vc_4 424 62 5813 5812 C 363 0.00 1265 reject_low 5 ALIGNMENT 0 YS2-5j10.q1k vc_7 426 591 13562 13561 F 166 0.00 1265 reject_low 20 ALIGNMENT 354 YS2-5j10.q1k chr12 1 384 459145 459529 F 384 99.22 1265 accept 0 ALIGNMENT 363 YS2-5j10.p1k chr12 423 34 468277 468666 C 390 99.49 440 accept 0 ALIGNMENT 0 YS2-5j10.q1k chr06 162 62 31730 31729 C 101 0.00 1265 reject_low 10 ALIGNMENT 41 YS2-5j10.q1k vc_2 425 385 2105 2145 C 41 100.00 1265 reject_low 16 ALIGNMENT 36 YS2-5j10.q1k vc_5 422 387 1 36 C 36 100.00 1265 reject_low 21 ALIGNMENT 156 YS2-5j10.q1k vc_4 425 586 6353 6514 F 162 99.38 1265|1,0 reject_low 12 ALIGNMENT 0 YS2-5j10.q1k vc_5 386 62 37 36 C 325 0.00 1265 reject_low 21 ALIGNMENT 0 YS2-5j10.q1k vc_1 384 62 2513 2512 C 323 0.00 1265 reject_low 15 ALIGNMENT 0 YS2-5j10.q1k vc_7 424 62 2728 2727 C 363 0.00 1265 reject_low 4 ALIGNMENT 325 YS2-5j10.q1k vc_1 425 858 2531 2963 F 434 92.86 1265 reject_low 6 ALIGNMENT 325 YS2-5j10.q1k vc_2 425 858 2164 2596 F 434 92.86 1265 reject_low 7 ALIGNMENT 329 YS2-5j10.q1k vc_7 924 425 2226 2727 C 500 89.80 1265 reject_low 4 ALIGNMENT 0 YS2-5j10.q1k vc_4 424 62 1535 1534 C 363 0.00 1265 reject_low 14 ALIGNMENT 94 YS2-5j10.p1k chr06 148 255 31622 31729 F 108 98.15 440 reject_low 9 ALIGNMENT 0 YS2-5j10.q1k vc_4 591 512 1449 1448 C 80 0.00 1265 reject_low 14 ALIGNMENT 329 YS2-5j10.q1k vc_5 425 924 2398 2899 F 500 89.80 1265 reject_low 3 ALIGNMENT 45 YS2-5j10.q1k vc_7 636 585 6360 6411 C 52 96.15 1265|1,0 reject_low 13 ALIGNMENT 0 YS2-5j10.q1k vc_5 62 424 2398 2397 F 363 0.00 1265 reject_low 3 ALIGNMENT 0 YS2-5j10.q1k vc_7 62 387 13525 13524 F 326 0.00 1265 reject_low 20 ALIGNMENT 0 YS2-5j10.q1k vc_2 591 426 2106 2105 C 166 0.00 1265 reject_low 16 ALIGNMENT 38 YS2-5j10.q1k vc_7 388 425 63 100 F 38 100.00 1265 reject_low 19 ALIGNMENT 0 YS2-5j10.q1k vc_1 62 424 2531 2530 F 363 0.00 1265 reject_low 6 ALIGNMENT 0 YS2-5j10.q1k vc_4 62 424 126 125 F 363 0.00 1265 reject_low 11 ALIGNMENT 0 YS2-5j10.q1k vc_7 426 591 100 99 F 166 0.00 1265 reject_low 19 ALIGNMENT 0 YS2-5j10.q1k vc_3 384 62 2513 2512 C 323 0.00 1265 reject_low 17 ALIGNMENT 39 YS2-5j10.q1k vc_5 425 387 5025 5063 C 39 100.00 1265 reject_low 18 ALIGNMENT 322 YS2-5j10.q1k vc_4 924 425 5309 5812 C 500 89.40 1265 reject_low 5 ALIGNMENT 0 YS2-5j10.q1k vc_3 62 424 2531 2530 F 363 0.00 1265 reject_low 8 ALIGNMENT 123 YS2-5j10.q1k vc_7 858 635 4950 5172 C 224 87.05 1265|0,1 reject_low 13 ALIGNMENT 0 YS2-5j10.p1k chr12 440 424 468278 468277 C 17 0.00 440 accept 0 ALIGNMENT 0 YS2-5j10.q1k vc_7 584 62 6412 6411 C 523 0.00 1265 reject_low 13 ALIGNMENT 0 YS2-5j10.q1k chr06 591 271 31623 31622 C 321 0.00 1265 reject_low 10 ALIGNMENT 0 YS2-5j10.q1k vc_2 384 62 2146 2145 C 323 0.00 1265 reject_low 16 ALIGNMENT 325 YS2-5j10.q1k vc_3 425 858 2531 2963 F 434 92.86 1265 reject_low 8 ALIGNMENT 354 YS2-5j10.q1k chr12 1 384 468282 468666 F 384 99.22 1265 reject_low 2 ALIGNMENT 0 YS2-5j10.q1k vc_1 591 426 2473 2472 C 166 0.00 1265 reject_low 15 ALIGNMENT 0 YS2-5j10.q1k chr12 385 591 468666 468665 F 207 0.00 1265 reject_low 2 ALIGNMENT 0 YS2-5j10.q1k vc_5 591 423 2 1 C 169 0.00 1265 reject_low 21 ALIGNMENT 363 YS2-5j10.p1k chr12 423 34 459140 459529 C 390 99.49 440 reject_low 1 ALIGNMENT 0 YS2-5j10.q1k vc_4 62 384 5831 5830 F 323 0.00 1265 reject_low 12 ALIGNMENT 41 YS2-5j10.q1k vc_4 385 425 5831 5871 F 41 100.00 1265 reject_low 12 ALIGNMENT 0 YS2-5j10.q1k chr12 385 591 459529 459528 F 207 0.00 1265 accept 0 ALIGNMENT 94 YS2-5j10.q1k chr06 270 163 31622 31729 C 108 98.15 1265 reject_low 10 ALIGNMENT 38 YS2-5j10.q1k vc_7 388 425 13525 13562 F 38 100.00 1265 reject_low 20 ALIGNMENT 0 YS2-5j10.q1k vc_4 426 425 5872 6353 F 0 0.00 1265 reject_low 12 ALIGNMENT 86 YS2-5j10.q1k vc_4 511 425 1448 1534 C 87 100.00 1265 reject_low 14 ALIGNMENT 0 YS2-5j10.q1k vc_5 386 62 5064 5063 C 325 0.00 1265 reject_low 18 ALIGNMENT 0 YS2-5j10.q1k vc_5 591 426 5026 5025 C 166 0.00 1265 reject_low 18 ALIGNMENT 0 YS2-5j10.q1k vc_3 591 426 2473 2472 C 166 0.00 1265 reject_low 17 ALIGNMENT 156 YS2-5j10.q1k vc_4 425 586 126 287 F 162 99.38 1265 reject_low 11 ALIGNMENT 0 YS2-5j10.q1k vc_7 635 636 5172 6360 C 0 0.00 1265 reject_low 13 ALIGNMENT 0 YS2-5j10.p1k chr06 62 147 31622 31621 F 86 0.00 440 reject_low 9 ALIGNMENT 465 YS2-5j12.p1k chr15 190 886 343805 344501 F 697 90.39 1449 accept 0 ALIGNMENT 0 YS2-5j13.p1k chr08 178 62 252967 252966 C 117 0.00 1438 reject_low 5 ALIGNMENT 23 YS2-5j13.p1k chr15 228 179 428006 428055 C 50 86.00 1438 reject_low 7 ALIGNMENT 0 YS2-5j13.p1k chr15 178 62 428056 428055 C 117 0.00 1438 reject_low 7 ALIGNMENT 0 YS2-5j13.p1k chr08 176 62 365402 365401 C 115 0.00 1438 reject_low 4 ALIGNMENT 0 YS2-5j13.p1k chr08 881 229 365390 365389 C 653 0.00 1438 reject_low 1 ALIGNMENT 0 YS2-5j13.p1k chr04 226 881 604272 604271 F 656 0.00 1438 reject_low 10 ALIGNMENT 0 YS2-5j13.p1k chr01 205 881 194030 194029 F 677 0.00 1438 reject_low 9 ALIGNMENT 948 YS2-5j13.p1k chr05 1121 34 219043 220132 C 1088 97.33 1438 accept 0 ALIGNMENT 0 YS2-5j13.p1k chr07 229 881 70197 70196 F 653 0.00 1438 reject_low 6 ALIGNMENT 0 YS2-5j13.p1k chr15 881 229 428007 428006 C 653 0.00 1438 reject_low 7 ALIGNMENT 0 YS2-5j13.p1k chr07 229 720 378049 378039 F 492 0.00 1438 reject_low 12 ALIGNMENT 20 YS2-5j13.p1k chr07 721 744 378040 378063 F 24 95.83 1438 reject_low 12 ALIGNMENT 631 YS2-5j13.q1k chr05 16 829 216214 217017 F 814 94.23 1380 accept 0 ALIGNMENT 26 YS2-5j13.p1k chr08 218 177 365360 365401 C 42 90.48 1438 reject_low 4 ALIGNMENT 0 YS2-5j13.p1k chr02 168 62 541519 541518 C 107 0.00 1438 reject_low 2 ALIGNMENT 0 YS2-5j13.p1k chr08 881 219 365361 365360 C 663 0.00 1438 reject_low 4 ALIGNMENT 0 YS2-5j13.p1k chr03 202 62 271506 271505 C 141 0.00 1438 reject_low 11 ALIGNMENT 0 YS2-5j13.p1k chr08 881 225 252922 252921 C 657 0.00 1438 reject_low 5 ALIGNMENT 20 YS2-5j13.p1k chr03 228 203 271480 271505 C 26 96.15 1438 reject_low 11 ALIGNMENT 0 YS2-5j13.p1k chr04 62 189 604237 604236 F 128 0.00 1438 reject_low 10 ALIGNMENT 0 YS2-5j13.p1k chr07 745 881 378063 378062 F 137 0.00 1438 reject_low 12 ALIGNMENT 21 YS2-5j13.p1k chr08 228 178 365425 365475 C 51 84.31 1438 reject_low 8 ALIGNMENT 0 YS2-5j13.p1k chr07 62 197 378018 378017 F 136 0.00 1438 reject_low 12 ALIGNMENT 28 YS2-5j13.p1k chr08 228 160 365389 365457 C 69 82.61 1438 reject_low 1 ALIGNMENT 0 YS2-5j13.p1k chr01 62 178 194005 194004 F 117 0.00 1438 reject_low 9 ALIGNMENT 37 YS2-5j13.p1k chr02 228 169 541459 541518 C 60 90.00 1438 reject_low 2 ALIGNMENT 0 YS2-5j13.p1k chr04 229 881 604284 604283 F 653 0.00 1438 reject_low 3 ALIGNMENT 21 YS2-5j13.p1k chr07 198 228 378018 378048 F 31 93.55 1438 reject_low 12 ALIGNMENT 21 YS2-5j13.p1k chr04 190 225 604237 604272 F 36 88.89 1438 reject_low 10 ALIGNMENT 20 YS2-5j13.p1k chr01 179 204 194005 194030 F 26 96.15 1438 reject_low 9 ALIGNMENT 28 YS2-5j13.p1k chr04 181 228 604237 604284 F 48 89.58 1438 reject_low 3 ALIGNMENT 0 YS2-5j13.p1k chr08 177 62 365476 365475 C 116 0.00 1438 reject_low 8 ALIGNMENT 0 YS2-5j13.p1k chr08 159 62 365458 365457 C 98 0.00 1438 reject_low 1 ALIGNMENT 26 YS2-5j13.p1k chr08 224 179 252921 252966 C 46 89.13 1438 reject_low 5 ALIGNMENT 0 YS2-5j13.p1k chr07 62 191 70161 70160 F 130 0.00 1438 reject_low 6 ALIGNMENT 0 YS2-5j13.p1k chr03 881 229 271481 271480 C 653 0.00 1438 reject_low 11 ALIGNMENT 0 YS2-5j13.p1k chr02 881 229 541460 541459 C 653 0.00 1438 reject_low 2 ALIGNMENT 0 YS2-5j13.p1k chr08 881 229 365426 365425 C 653 0.00 1438 reject_low 8 ALIGNMENT 27 YS2-5j13.p1k chr07 192 228 70161 70197 F 37 94.59 1438 reject_low 6 ALIGNMENT 0 YS2-5j13.p1k chr04 62 180 604237 604236 F 119 0.00 1438 reject_low 3 ALIGNMENT 375 YS2-5j18.q1k vc_4 795 277 5295 5812 C 519 92.29 1370 reject_low 4 ALIGNMENT 0 YS2-5j18.q1k vc_4 276 96 1535 1534 C 181 0.00 1370 reject_low 18 ALIGNMENT 0 YS2-5j18.q1k chr12 489 240 452576 452575 C 250 0.00 1370 accept 0 ALIGNMENT 366 YS2-5j18.q1k vc_1 277 730 2531 2983 F 454 94.49 1370 reject_low 5 ALIGNMENT 0 YS2-5j18.q1k vc_7 436 96 6412 6411 C 341 0.00 1370 reject_low 8 ALIGNMENT 168 YS2-5j18.q1k vc_7 730 487 4930 5172 C 244 90.98 1370|0,1 reject_low 8 ALIGNMENT 0 YS2-5j18.q1k vc_4 276 96 5813 5812 C 181 0.00 1370 reject_low 4 ALIGNMENT 0 YS2-5j18.q1k vc_4 96 236 5831 5830 F 141 0.00 1370 reject_low 9 ALIGNMENT 0 YS2-5j18.q1k vc_4 439 489 6514 6513 F 51 0.00 1370 reject_low 9 ALIGNMENT 382 YS2-5j18.q1k vc_5 277 795 2398 2913 F 519 92.49 1370 reject_low 2 ALIGNMENT 0 YS2-5j18.q1k vc_3 236 96 2513 2512 C 141 0.00 1370 reject_low 13 ALIGNMENT 0 YS2-5j18.q1k vc_4 673 364 113 1447 C 310 0.00 1370 reject_low 18 ALIGNMENT 0 YS2-5j18.q1k vc_3 96 276 2531 2530 F 181 0.00 1370 reject_low 7 ALIGNMENT 37 YS2-5j18.q1k vc_4 730 674 55 112 C 57 91.23 1370 reject_low 18 ALIGNMENT 150 YS2-5j18.q1k vc_4 277 438 6353 6514 F 162 98.15 1370|1,0 reject_low 9 ALIGNMENT 0 YS2-5j18.q1k vc_7 278 489 13562 13561 F 212 0.00 1370 reject_low 15 ALIGNMENT 382 YS2-5j18.q1k vc_7 795 277 2212 2727 C 519 92.68 1370 reject_low 3 ALIGNMENT 0 YS2-5j18.q1k vc_4 439 673 288 1547 F 235 0.00 1370 reject_low 10 ALIGNMENT 0 YS2-5j18.q1k vc_4 278 277 5872 6353 F 0 0.00 1370 reject_low 9 ALIGNMENT 219 YS2-5j18.q1k chr12 239 1 461712 461950 C 239 97.49 1370 accept 1 ALIGNMENT 254 YS2-5j18.p1k chr12 27 285 461711 461970 F 259 99.61 291 accept 1 ALIGNMENT 37 YS2-5j18.q1k vc_4 674 730 1548 1605 F 57 91.23 1370 reject_low 10 ALIGNMENT 37 YS2-5j18.q1k vc_4 730 674 6282 6339 C 57 91.23 1370 reject_low 17 ALIGNMENT 366 YS2-5j18.q1k vc_2 277 730 2164 2616 F 454 94.49 1370 reject_low 6 ALIGNMENT 0 YS2-5j18.q1k vc_5 238 96 37 36 C 143 0.00 1370 reject_low 16 ALIGNMENT 47 YS2-5j18.q1k vc_7 488 437 6360 6411 C 52 98.08 1370|1,0 reject_low 8 ALIGNMENT 0 YS2-5j18.q1k vc_1 96 276 2531 2530 F 181 0.00 1370 reject_low 5 ALIGNMENT 41 YS2-5j18.q1k vc_1 277 237 2472 2512 C 41 100.00 1370 reject_low 11 ALIGNMENT 82 YS2-5j18.q1k vc_4 363 277 1448 1534 C 87 98.85 1370 reject_low 18 ALIGNMENT 0 YS2-5j18.q1k vc_3 489 278 2473 2472 C 212 0.00 1370 reject_low 13 ALIGNMENT 0 YS2-5j18.q1k vc_4 96 276 126 125 F 181 0.00 1370 reject_low 10 ALIGNMENT 0 YS2-5j18.q1k vc_4 673 96 6340 6339 C 578 0.00 1370 reject_low 17 ALIGNMENT 0 YS2-5j18.q1k vc_5 238 96 5064 5063 C 143 0.00 1370 reject_low 14 ALIGNMENT 0 YS2-5j18.q1k vc_7 276 96 2728 2727 C 181 0.00 1370 reject_low 3 ALIGNMENT 0 YS2-5j18.q1k vc_2 236 96 2146 2145 C 141 0.00 1370 reject_low 12 ALIGNMENT 0 YS2-5j18.q1k chr12 489 240 461713 461712 C 250 0.00 1370 accept 1 ALIGNMENT 0 YS2-5j18.q1k vc_5 489 278 5026 5025 C 212 0.00 1370 reject_low 14 ALIGNMENT 36 YS2-5j18.q1k vc_5 274 239 1 36 C 36 100.00 1370 reject_low 16 ALIGNMENT 150 YS2-5j18.q1k vc_4 277 438 126 287 F 162 98.15 1370 reject_low 10 ALIGNMENT 366 YS2-5j18.q1k vc_3 277 730 2531 2983 F 454 94.49 1370 reject_low 7 ALIGNMENT 0 YS2-5j18.q1k vc_7 96 239 13525 13524 F 144 0.00 1370 reject_low 15 ALIGNMENT 0 YS2-5j18.q1k vc_5 96 276 2398 2397 F 181 0.00 1370 reject_low 2 ALIGNMENT 254 YS2-5j18.p1k chr12 27 285 452574 452833 F 259 99.61 291 accept 0 ALIGNMENT 41 YS2-5j18.q1k vc_3 277 237 2472 2512 C 41 100.00 1370 reject_low 13 ALIGNMENT 0 YS2-5j18.q1k vc_1 489 278 2473 2472 C 212 0.00 1370 reject_low 11 ALIGNMENT 0 YS2-5j18.q1k vc_5 489 275 2 1 C 215 0.00 1370 reject_low 16 ALIGNMENT 41 YS2-5j18.q1k vc_4 237 277 5831 5871 F 41 100.00 1370 reject_low 9 ALIGNMENT 0 YS2-5j18.q1k vc_7 487 488 5172 6360 C 0 0.00 1370 reject_low 8 ALIGNMENT 219 YS2-5j18.q1k chr12 239 1 452575 452813 C 239 97.49 1370 accept 0 ALIGNMENT 0 YS2-5j18.q1k vc_1 236 96 2513 2512 C 141 0.00 1370 reject_low 11 ALIGNMENT 41 YS2-5j18.q1k vc_2 277 237 2105 2145 C 41 100.00 1370 reject_low 12 ALIGNMENT 39 YS2-5j18.q1k vc_5 277 239 5025 5063 C 39 100.00 1370 reject_low 14 ALIGNMENT 0 YS2-5j18.q1k vc_2 96 276 2164 2163 F 181 0.00 1370 reject_low 6 ALIGNMENT 38 YS2-5j18.q1k vc_7 240 277 13525 13562 F 38 100.00 1370 reject_low 15 ALIGNMENT 0 YS2-5j18.q1k vc_2 489 278 2106 2105 C 212 0.00 1370 reject_low 12 ALIGNMENT 733 YS2-5j21.q1k chr02 854 4 18200 19048 C 851 96.12 1295 accept 0 ALIGNMENT 940 YS2-5j21.p1k chr02 29 1107 13717 14807 F 1079 96.94 1354 accept 0 ALIGNMENT 682 YS2-5j22.q1k chr14 882 10 57884 58756 C 873 94.16 1116 accept 0 ALIGNMENT 922 YS2-5j22.p1k chr14 30 1097 54586 55666 F 1068 97.66 1389 accept 0 ALIGNMENT 924 YS2-5j23.p1k chr08 31 1080 222245 223309 F 1050 97.14 1354 accept 0 ALIGNMENT 697 YS2-5j23.q1k chr08 903 1 223815 224709 C 903 93.80 1156 accept 0 ALIGNMENT 0 YS2-5j24.p1k chr04 240 223 89086 89085 C 18 0.00 240 accept 0 ALIGNMENT 178 YS2-5j24.p1k chr04 222 31 89085 89275 C 192 99.48 240 accept 0 ALIGNMENT 0 YS2-5k02.q1k chrm 348 103 29838 29837 C 246 0.00 1201 reject_low 1 ALIGNMENT 38 YS2-5k02.q1k chrm 100 52 34933 34981 C 49 93.88 1201 reject_low 2 ALIGNMENT 0 YS2-5k02.q1k chrm 101 348 12312 12311 F 248 0.00 1201 reject_low 6 ALIGNMENT 0 YS2-5k02.q1k chr01 286 62 189350 189349 C 225 0.00 1201 reject_low 3 ALIGNMENT 136 YS2-5k02.p1k chrm 72 479 21342 21740 F 408 83.33 1447 reject_low 1,2 ALIGNMENT 45 YS2-5k02.q1k chrm 41 100 12254 12312 F 60 93.33 1201 reject_low 6 ALIGNMENT 39 YS2-5k02.q1k chrm 100 35 83052 83116 C 66 89.39 1201 reject_low 7 ALIGNMENT 804 YS2-5k02.p1k chrm 66 1227 41646 42816 F 1162 95.52 1447 accept 0 ALIGNMENT 0 YS2-5k02.q1k chrm 99 348 57071 57070 F 250 0.00 1201 reject_low 5 ALIGNMENT 37 YS2-5k02.q1k chrm 101 56 48099 48144 C 46 95.65 1201 reject_low 9 ALIGNMENT 0 YS2-5k02.q1k chrm 348 101 34934 34933 C 248 0.00 1201 reject_low 2 ALIGNMENT 0 YS2-5k02.q1k chrm 348 102 48100 48099 C 247 0.00 1201 reject_low 9 ALIGNMENT 60 YS2-5k02.q1k chr01 368 287 189267 189349 C 82 95.12 1201 reject_low 3 ALIGNMENT 0 YS2-5k02.q1k chrm 348 101 83053 83052 C 248 0.00 1201 reject_low 7 ALIGNMENT 399 YS2-5k02.q1k chrm 651 13 42550 43182 C 639 92.64 1201 accept 0 ALIGNMENT 0 YS2-5k02.q1k chrm 101 348 128 127 F 248 0.00 1201 reject_low 8 ALIGNMENT 0 YS2-5k02.q1k chr07 402 369 404850 404853 C 34 0.00 1201 reject_low 4 ALIGNMENT 42 YS2-5k02.q1k chrm 102 53 29837 29886 C 50 96.00 1201 reject_low 1 ALIGNMENT 35 YS2-5k02.q1k chrm 19 98 56992 57071 F 80 83.75 1201 reject_low 5 ALIGNMENT 22 YS2-5k02.q1k chr07 455 403 404797 404849 C 53 88.68 1201 reject_low 4 ALIGNMENT 60 YS2-5k02.q1k chr07 368 287 404854 404936 C 82 95.12 1201 reject_low 4 ALIGNMENT 36 YS2-5k02.q1k chrm 47 100 76 128 F 54 90.74 1201 reject_low 8 ALIGNMENT 25 YS2-5k02.q1k chr01 455 403 189210 189262 C 53 90.57 1201 reject_low 3 ALIGNMENT 0 YS2-5k02.q1k chr01 402 369 189263 189266 C 34 0.00 1201 reject_low 3 ALIGNMENT 0 YS2-5k02.p1k chrm 480 918 21740 21739 F 439 0.00 1447 reject_low 1,2 ALIGNMENT 0 YS2-5k02.q1k chr07 286 62 404937 404936 C 225 0.00 1201 reject_low 4 ALIGNMENT 927 YS2-5k03.p1k chr07 1146 33 913017 914138 C 1114 95.06 1368 accept 0 ALIGNMENT 651 YS2-5k03.q1k chr07 35 1034 907976 908960 F 1000 89.80 1294 accept 0 ALIGNMENT 643 YS2-5k05.q1k chr02 32 847 415138 415943 F 816 94.36 1286 accept 0 ALIGNMENT 956 YS2-5k05.p1k chr02 1176 48 418761 419905 C 1129 96.10 1374 accept 0 ALIGNMENT 178 YS2-5k06.q1k vc_7 321 4 2260 2572 C 318 86.79 734 reject_vc 1 ALIGNMENT 176 YS2-5k06.q1k vc_1 4 305 2686 2983 F 302 87.42 734 reject_vc 3 ALIGNMENT 171 YS2-5k06.q1k vc_4 321 4 5343 5657 C 318 86.16 734 reject_vc 2 ALIGNMENT 48 YS2-5k06.q1k vc_7 60 9 6360 6411 C 52 98.08 734|1,0 reject_low 6 ALIGNMENT 121 YS2-5k06.q1k vc_7 305 59 4930 5172 C 247 84.62 734|0,1 reject_low 6 ALIGNMENT 176 YS2-5k06.q1k vc_2 4 305 2319 2616 F 302 87.42 734 reject_vc 4 ALIGNMENT 0 YS2-5k06.q1k vc_7 59 60 5172 6360 C 0 0.00 734 reject_low 6 ALIGNMENT 178 YS2-5k06.q1k vc_5 4 321 2553 2865 F 318 86.79 734 reject_vc 0 ALIGNMENT 176 YS2-5k06.q1k vc_3 4 305 2686 2983 F 302 87.42 734 reject_vc 5 ALIGNMENT 172 YS2-5k07.q1k vc_7 326 1 2254 2569 C 326 86.50 831 reject_vc 2 ALIGNMENT 168 YS2-5k07.q1k vc_2 1 290 2322 2604 F 290 87.93 831 reject_vc 5 ALIGNMENT 168 YS2-5k07.q1k vc_3 1 290 2689 2971 F 290 87.93 831 reject_vc 6 ALIGNMENT 172 YS2-5k07.q1k vc_5 1 326 2556 2871 F 326 86.50 831 reject_vc 1 ALIGNMENT 119 YS2-5k07.q1k vc_7 290 53 4942 5172 C 238 85.71 831 reject_vc 7 ALIGNMENT 168 YS2-5k07.q1k vc_1 1 290 2689 2971 F 290 87.93 831 reject_vc 4 ALIGNMENT 319 YS2-5k07.p1k chr02 377 32 196695 197042 C 346 99.42 396 accept 0 ALIGNMENT 165 YS2-5k07.q1k vc_4 326 1 5337 5654 C 326 85.89 831 reject_vc 3 ALIGNMENT 0 YS2-5k07.p1k chr02 396 378 196696 196695 C 19 0.00 396 accept 0 ALIGNMENT 655 YS2-5k08.q1k chr04 22 925 860678 861570 F 904 92.37 1392 accept 0 ALIGNMENT 1030 YS2-5k08.p1k chr04 1218 34 863656 864847 C 1185 96.46 1520 accept 0 ALIGNMENT 143 YS2-5k10.q1k chr04 473 228 672124 672363 C 246 89.02 1526 accept_chi 1 ALIGNMENT 0 YS2-5k10.p1k chr04 379 396 672468 672467 F 18 0.00 396 accept_chi 0 ALIGNMENT 286 YS2-5k10.p1k chr04 50 378 672141 672468 F 329 97.26 396 accept_chi 0 ALIGNMENT 1022 YS2-5k11.p1k chr07 1230 36 687781 688991 C 1195 96.32 1422 accept 0 ALIGNMENT 650 YS2-5k11.q1k chr07 28 843 687283 688090 F 816 94.49 1253 accept 0 ALIGNMENT 889 YS2-5k12.p1k chr11 1098 32 552011 553090 C 1067 95.60 1404 accept 0 ALIGNMENT 743 YS2-5k12.q1k chr11 1 964 548171 549128 F 964 93.88 1209 accept 0 ALIGNMENT 892 YS2-5k13.p1k chr15 35 1024 436838 437835 F 990 98.48 1323 accept 0 ALIGNMENT 695 YS2-5k13.q1k chr15 857 31 439043 439863 C 827 95.89 1331 accept 0 ALIGNMENT 524 YS2-5k14.q1k chr03 1 683 224025 224705 F 683 92.97 1131 accept 0 ALIGNMENT 945 YS2-5k14.p1k chr03 1193 33 227944 229107 C 1161 94.92 1508 accept 0 ALIGNMENT 661 YS2-5k15.q1k chr04 881 32 1232957 1233803 C 850 94.12 1348 accept 0 ALIGNMENT 847 YS2-5k15.p1k chr04 30 987 1227317 1228295 F 958 97.60 1308 accept 0 ALIGNMENT 389 YS2-5k16.q1k vc_4 421 1 5232 5654 C 421 97.62 1023 reject_low 2 ALIGNMENT 60 YS2-5k16.q1k vc_4 302 238 6275 6339 C 65 98.46 1023 reject_low 9 ALIGNMENT 51 YS2-5k16.q1k vc_7 54 3 6360 6411 C 52 100.00 1023|1,0 reject_low 7 ALIGNMENT 480 YS2-5k16.q1k vc_5 1 661 2556 3203 F 661 92.28 1023 reject_vc 0 ALIGNMENT 292 YS2-5k16.q1k vc_2 1 302 2322 2623 F 302 99.01 1023 reject_low 4 ALIGNMENT 0 YS2-5k16.q1k vc_7 304 303 4700 4922 C 2 0.00 1023 reject_low 7 ALIGNMENT 60 YS2-5k16.q1k vc_4 238 302 1548 1612 F 65 98.46 1023 reject_low 6 ALIGNMENT 292 YS2-5k16.q1k vc_3 1 302 2689 2990 F 302 99.01 1023 reject_low 5 ALIGNMENT 103 YS2-5k16.q1k vc_7 421 305 4583 4699 C 117 96.58 1023 reject_low 7 ALIGNMENT 183 YS2-5k16.q1k vc_4 311 661 1882 2219 F 351 86.89 1023 reject_low 6 ALIGNMENT 292 YS2-5k16.q1k vc_1 1 302 2689 2990 F 302 99.01 1023 reject_low 3 ALIGNMENT 0 YS2-5k16.q1k vc_4 237 62 113 112 C 176 0.00 1023 reject_low 8 ALIGNMENT 60 YS2-5k16.q1k vc_4 302 238 48 112 C 65 98.46 1023 reject_low 8 ALIGNMENT 0 YS2-5k16.q1k vc_7 53 54 5172 6360 C 0 0.00 1023 reject_low 7 ALIGNMENT 480 YS2-5k16.q1k vc_7 661 1 1922 2569 C 661 92.28 1023 reject_vc 1 ALIGNMENT 0 YS2-5k16.q1k vc_4 62 237 1548 1547 F 176 0.00 1023 reject_low 6 ALIGNMENT 0 YS2-5k16.q1k vc_4 237 62 6340 6339 C 176 0.00 1023 reject_low 9 ALIGNMENT 0 YS2-5k16.q1k vc_4 303 310 1613 1881 F 8 0.00 1023 reject_low 6 ALIGNMENT 237 YS2-5k16.q1k vc_7 302 53 4923 5172 C 250 98.40 1023|0,1 reject_low 7 ALIGNMENT 643 YS2-5k17.q1k chr13 869 24 406351 407183 C 846 93.62 1271 accept 0 ALIGNMENT 922 YS2-5k17.p1k chr13 23 1113 403518 404623 F 1091 96.70 1349 accept 0 ALIGNMENT 686 YS2-5k18.q1k chr04 5 887 385299 386181 F 883 93.77 1243 accept 0 ALIGNMENT 967 YS2-5k18.p1k chr04 1121 25 388663 389774 C 1097 97.63 1400 accept 0 ALIGNMENT 974 YS2-5k19.p1k chr04 31 1196 1195390 1196568 F 1166 95.97 1368 accept 0 ALIGNMENT 629 YS2-5k19.q1k chr04 764 34 1199176 1199904 C 731 96.44 1368 accept 0 ALIGNMENT 157 YS2-5k20.q1k vc_7 287 1 2290 2569 C 287 87.11 569 reject_vc 5 ALIGNMENT 157 YS2-5k20.q1k vc_1 1 287 2689 2968 F 287 86.76 569 reject_vc 1 ALIGNMENT 0 YS2-5k20.p1k chr06 509 491 203303 203302 C 19 0.00 509 accept 0 ALIGNMENT 51 YS2-5k20.q1k vc_7 54 3 6360 6411 C 52 100.00 569|1,0 reject_vc 7 ALIGNMENT 150 YS2-5k20.q1k vc_4 287 1 5373 5654 C 287 86.41 569 reject_vc 6 ALIGNMENT 103 YS2-5k20.q1k vc_7 287 53 4945 5172 C 235 83.83 569|0,1 reject_vc 7 ALIGNMENT 421 YS2-5k20.p1k chr06 490 41 203302 203751 C 450 98.89 509 accept 0 ALIGNMENT 0 YS2-5k20.q1k vc_7 53 54 5172 6360 C 0 0.00 569 reject_vc 7 ALIGNMENT 157 YS2-5k20.q1k vc_2 1 287 2322 2601 F 287 86.76 569 reject_vc 2 ALIGNMENT 157 YS2-5k20.q1k vc_3 1 287 2689 2968 F 287 86.76 569 reject_vc 3 ALIGNMENT 157 YS2-5k20.q1k vc_5 1 287 2556 2835 F 287 86.76 569 reject_vc 4 ALIGNMENT 698 YS2-5k21.q1k chr13 977 36 318631 319565 C 942 92.78 1240 accept 0 ALIGNMENT 974 YS2-5k21.p1k chr13 38 1172 314078 315226 F 1135 96.56 1325 accept 0 ALIGNMENT 127 YS2-5k22.q1k vc_4 308 612 1879 2169 F 305 84.26 880 reject_low 7 ALIGNMENT 0 YS2-5k22.q1k vc_4 237 62 6340 6339 C 176 0.00 880 reject_low 9 ALIGNMENT 0 YS2-5k22.q1k vc_4 62 237 1548 1547 F 176 0.00 880 reject_low 7 ALIGNMENT 289 YS2-5k22.q1k vc_1 1 302 2689 2990 F 302 98.68 880 reject_low 3 ALIGNMENT 289 YS2-5k22.q1k vc_2 1 302 2322 2623 F 302 98.68 880 reject_low 4 ALIGNMENT 420 YS2-5k22.q1k vc_5 1 612 2556 3153 F 612 91.34 880 reject_vc 0 ALIGNMENT 81 YS2-5k22.q1k vc_7 421 305 4584 4699 C 117 90.60 880 reject_low 6 ALIGNMENT 420 YS2-5k22.q1k vc_7 612 1 1972 2569 C 612 91.34 880 reject_vc 1 ALIGNMENT 0 YS2-5k22.q1k vc_4 303 307 1613 1878 F 5 0.00 880 reject_low 7 ALIGNMENT 58 YS2-5k22.q1k vc_4 302 238 6275 6339 C 65 96.92 880 reject_low 9 ALIGNMENT 0 YS2-5k22.q1k vc_4 237 62 113 112 C 176 0.00 880 reject_low 8 ALIGNMENT 0 YS2-5k22.q1k vc_7 304 303 4700 4922 C 2 0.00 880 reject_low 6 ALIGNMENT 363 YS2-5k22.q1k vc_4 421 1 5233 5654 C 421 95.72 880 reject_low 2 ALIGNMENT 58 YS2-5k22.q1k vc_4 238 302 1548 1612 F 65 96.92 880 reject_low 7 ALIGNMENT 234 YS2-5k22.q1k vc_7 302 53 4923 5172 C 250 98.00 880|0,1 reject_low 6 ALIGNMENT 0 YS2-5k22.q1k vc_7 53 54 5172 6360 C 0 0.00 880 reject_low 6 ALIGNMENT 58 YS2-5k22.q1k vc_4 302 238 48 112 C 65 96.92 880 reject_low 8 ALIGNMENT 289 YS2-5k22.q1k vc_3 1 302 2689 2990 F 302 98.68 880 reject_low 5 ALIGNMENT 51 YS2-5k22.q1k vc_7 54 3 6360 6411 C 52 100.00 880|1,0 reject_low 6 ALIGNMENT 34 YS2-5l01.q1k vc_4 300 238 6275 6339 C 63 85.71 761 reject_low 10 ALIGNMENT 245 YS2-5l01.q1k vc_1 1 300 2689 2990 F 300 94.33 761 reject_vc 4 ALIGNMENT 51 YS2-5l01.q1k vc_7 54 3 6360 6411 C 52 100.00 761|1,0 reject_vc 7 ALIGNMENT 268 YS2-5l01.q1k vc_4 387 1 5266 5654 C 387 90.44 761 reject_vc 3 ALIGNMENT 0 YS2-5l01.p1k chr08 316 298 372907 372906 C 19 0.00 316 accept 0 ALIGNMENT 34 YS2-5l01.q1k vc_4 238 300 1548 1612 F 63 85.71 761 reject_low 9 ALIGNMENT 34 YS2-5l01.q1k vc_4 300 238 48 112 C 63 85.71 761 reject_low 8 ALIGNMENT 245 YS2-5l01.q1k vc_2 1 300 2322 2623 F 300 94.33 761 reject_vc 5 ALIGNMENT 227 YS2-5l01.p1k chr08 297 34 372906 373169 C 264 98.11 316 accept 0 ALIGNMENT 0 YS2-5l01.q1k vc_7 53 54 5172 6360 C 0 0.00 761 reject_vc 7 ALIGNMENT 282 YS2-5l01.q1k vc_5 1 488 2556 3036 F 488 87.50 761 reject_vc 1 ALIGNMENT 191 YS2-5l01.q1k vc_7 300 53 4923 5172 C 248 92.74 761|0,1 reject_vc 7 ALIGNMENT 274 YS2-5l01.q1k vc_7 387 1 2183 2569 C 387 90.96 761 reject_vc 2 ALIGNMENT 245 YS2-5l01.q1k vc_3 1 300 2689 2990 F 300 94.33 761 reject_vc 6 ALIGNMENT 265 YS2-5l03.q1k vc_2 1 303 2322 2624 F 303 96.04 866 reject_low 4 ALIGNMENT 311 YS2-5l03.q1k vc_4 423 1 5232 5654 C 423 91.96 866 reject_low 2 ALIGNMENT 0 YS2-5l03.q1k vc_7 53 54 5172 6360 C 0 0.00 866 reject_low 6 ALIGNMENT 0 YS2-5l03.q1k vc_4 62 237 1548 1547 F 176 0.00 866 reject_low 7 ALIGNMENT 0 YS2-5l03.q1k vc_4 305 310 1615 1881 F 6 0.00 866 reject_low 7 ALIGNMENT 211 YS2-5l03.q1k vc_7 303 53 4922 5172 C 251 94.82 866|0,1 reject_low 6 ALIGNMENT 43 YS2-5l03.q1k vc_4 304 238 6273 6339 C 67 88.06 866 reject_low 9 ALIGNMENT 265 YS2-5l03.q1k vc_1 1 303 2689 2991 F 303 96.04 866 reject_low 3 ALIGNMENT 327 YS2-5l03.q1k vc_5 1 525 2556 3072 F 525 88.95 866 reject_vc 0 ALIGNMENT 56 YS2-5l03.q1k vc_4 311 525 1882 2088 F 215 79.07 866 reject_low 7 ALIGNMENT 0 YS2-5l03.q1k vc_4 237 62 6340 6339 C 176 0.00 866 reject_low 9 ALIGNMENT 0 YS2-5l03.q1k vc_7 304 304 4700 4921 C 1 0.00 866 reject_low 6 ALIGNMENT 265 YS2-5l03.q1k vc_3 1 303 2689 2991 F 303 96.04 866 reject_low 5 ALIGNMENT 43 YS2-5l03.q1k vc_4 304 238 46 112 C 67 88.06 866 reject_low 8 ALIGNMENT 327 YS2-5l03.q1k vc_7 525 1 2053 2569 C 525 88.95 866 reject_vc 1 ALIGNMENT 51 YS2-5l03.q1k vc_7 54 3 6360 6411 C 52 100.00 866|1,0 reject_low 6 ALIGNMENT 43 YS2-5l03.q1k vc_4 238 304 1548 1614 F 67 88.06 866 reject_low 7 ALIGNMENT 0 YS2-5l03.q1k vc_4 237 62 113 112 C 176 0.00 866 reject_low 8 ALIGNMENT 50 YS2-5l03.q1k vc_7 423 305 4583 4699 C 119 83.19 866 reject_low 6 ALIGNMENT 717 YS2-5l05.q1k chr08 947 31 129330 130236 C 917 94.11 1334 accept_chi 1 ALIGNMENT 950 YS2-5l05.p1k chr12 33 1074 783004 784048 F 1042 97.31 1434 accept_chi 0 ALIGNMENT 242 YS2-5l08.q1k vc_2 1 286 2322 2607 F 286 95.45 908 reject_low 4 ALIGNMENT 32 YS2-5l08.q1k vc_4 286 239 64 112 C 48 89.58 908 reject_low 7 ALIGNMENT 242 YS2-5l08.q1k vc_1 1 286 2689 2974 F 286 95.45 908 reject_low 3 ALIGNMENT 257 YS2-5l08.q1k vc_7 363 1 2207 2569 C 363 90.91 908 reject_vc 1 ALIGNMENT 250 YS2-5l08.q1k vc_4 363 1 5290 5654 C 363 90.36 908 reject_vc 2 ALIGNMENT 32 YS2-5l08.q1k vc_4 286 239 6291 6339 C 48 89.58 908 reject_low 9 ALIGNMENT 242 YS2-5l08.q1k vc_3 1 286 2689 2974 F 286 95.45 908 reject_low 5 ALIGNMENT 0 YS2-5l08.q1k vc_7 53 54 5172 6360 C 0 0.00 908 reject_low 6 ALIGNMENT 188 YS2-5l08.q1k vc_7 286 53 4939 5172 C 234 94.02 908|0,1 reject_low 6 ALIGNMENT 32 YS2-5l08.q1k vc_4 239 286 1548 1596 F 48 89.58 908 reject_low 8 ALIGNMENT 257 YS2-5l08.q1k vc_5 1 363 2556 2918 F 363 90.91 908 reject_vc 0 ALIGNMENT 51 YS2-5l08.q1k vc_7 54 3 6360 6411 C 52 100.00 908|1,0 reject_low 6 ALIGNMENT 941 YS2-5l10.p1k chr11 35 1158 447141 448275 F 1124 96.62 1500 accept 0 ALIGNMENT 600 YS2-5l10.q1k chr11 866 32 451496 452322 C 835 92.34 1322 accept 0 ALIGNMENT 0 YS2-5l11.q1k chr01 445 609 64582 64581 F 165 0.00 1276 accept_chi 1 ALIGNMENT 41 YS2-5l11.q1k vc_4 445 485 5831 5871 F 41 100.00 1276 reject_low 9 ALIGNMENT 394 YS2-5l11.p1k chr01 447 36 64171 64582 C 412 99.51 466 accept_chi 0 ALIGNMENT 0 YS2-5l11.q1k vc_4 484 92 1535 1534 C 393 0.00 1276 reject_low 10 ALIGNMENT 41 YS2-5l11.q1k vc_3 485 445 2472 2512 C 41 100.00 1276 reject_low 14 ALIGNMENT 272 YS2-5l11.q1k vc_3 485 900 2531 2943 F 416 90.14 1276 reject_low 6 ALIGNMENT 148 YS2-5l11.q1k vc_4 485 648 126 287 F 164 98.17 1276 reject_low 8 ALIGNMENT 0 YS2-5l11.q1k vc_5 92 484 2398 2397 F 393 0.00 1276 reject_low 2 ALIGNMENT 272 YS2-5l11.q1k vc_2 485 900 2164 2576 F 416 90.14 1276 reject_low 5 ALIGNMENT 276 YS2-5l11.q1k vc_5 485 970 2398 2875 F 486 87.86 1276 reject_low 2 ALIGNMENT 0 YS2-5l11.q1k vc_4 92 484 126 125 F 393 0.00 1276 reject_low 8 ALIGNMENT 84 YS2-5l11.q1k vc_4 573 485 1446 1534 C 89 98.88 1276 reject_low 10 ALIGNMENT 269 YS2-5l11.q1k vc_4 970 485 5333 5812 C 486 87.45 1276 reject_low 3 ALIGNMENT 0 YS2-5l11.q1k vc_2 92 484 2164 2163 F 393 0.00 1276 reject_low 5 ALIGNMENT 0 YS2-5l11.q1k vc_5 609 483 2 1 C 127 0.00 1276 reject_low 17 ALIGNMENT 0 YS2-5l11.q1k vc_7 486 609 13562 13561 F 124 0.00 1276 reject_low 16 ALIGNMENT 0 YS2-5l11.q1k vc_5 609 486 5026 5025 C 124 0.00 1276 reject_low 15 ALIGNMENT 0 YS2-5l11.q1k vc_3 444 92 2513 2512 C 353 0.00 1276 reject_low 14 ALIGNMENT 41 YS2-5l11.q1k vc_1 485 445 2472 2512 C 41 100.00 1276 reject_low 12 ALIGNMENT 41 YS2-5l11.q1k vc_2 485 445 2105 2145 C 41 100.00 1276 reject_low 13 ALIGNMENT 39 YS2-5l11.q1k vc_5 485 447 5025 5063 C 39 100.00 1276 reject_low 15 ALIGNMENT 48 YS2-5l11.q1k vc_7 698 647 6360 6411 C 52 98.08 1276 reject_low 11 ALIGNMENT 148 YS2-5l11.q1k vc_4 485 648 6353 6514 F 164 98.17 1276|1,0 reject_low 9 ALIGNMENT 0 YS2-5l11.q1k vc_1 92 484 2531 2530 F 393 0.00 1276 reject_low 4 ALIGNMENT 0 YS2-5l11.q1k vc_4 92 444 5831 5830 F 353 0.00 1276 reject_low 9 ALIGNMENT 0 YS2-5l11.q1k vc_4 486 485 5872 6353 F 0 0.00 1276 reject_low 9 ALIGNMENT 0 YS2-5l11.q1k vc_2 609 486 2106 2105 C 124 0.00 1276 reject_low 13 ALIGNMENT 0 YS2-5l11.q1k vc_7 484 92 2728 2727 C 393 0.00 1276 reject_low 7 ALIGNMENT 0 YS2-5l11.q1k vc_7 92 447 13525 13524 F 356 0.00 1276 reject_low 16 ALIGNMENT 0 YS2-5l11.p1k chr01 466 448 64172 64171 C 19 0.00 466 accept_chi 0 ALIGNMENT 38 YS2-5l11.q1k vc_7 448 485 13525 13562 F 38 100.00 1276 reject_low 16 ALIGNMENT 0 YS2-5l11.q1k vc_4 484 92 5813 5812 C 393 0.00 1276 reject_low 3 ALIGNMENT 0 YS2-5l11.q1k vc_5 446 92 37 36 C 355 0.00 1276 reject_low 17 ALIGNMENT 0 YS2-5l11.q1k vc_5 446 92 5064 5063 C 355 0.00 1276 reject_low 15 ALIGNMENT 36 YS2-5l11.q1k vc_5 482 447 1 36 C 36 100.00 1276 reject_low 17 ALIGNMENT 272 YS2-5l11.q1k vc_1 485 900 2531 2943 F 416 90.14 1276 reject_low 4 ALIGNMENT 0 YS2-5l11.q1k vc_3 92 484 2531 2530 F 393 0.00 1276 reject_low 6 ALIGNMENT 0 YS2-5l11.q1k vc_1 609 486 2473 2472 C 124 0.00 1276 reject_low 12 ALIGNMENT 272 YS2-5l11.q1k vc_7 900 485 2315 2727 C 416 90.14 1276 reject_low 7 ALIGNMENT 378 YS2-5l11.q1k chr01 31 444 64171 64582 F 414 98.31 1276 accept_chi 1 ALIGNMENT 0 YS2-5l11.q1k vc_7 646 92 6412 6411 C 555 0.00 1276 reject_low 11 ALIGNMENT 0 YS2-5l11.q1k vc_1 444 92 2513 2512 C 353 0.00 1276 reject_low 12 ALIGNMENT 0 YS2-5l11.q1k vc_2 444 92 2146 2145 C 353 0.00 1276 reject_low 13 ALIGNMENT 0 YS2-5l11.q1k vc_3 609 486 2473 2472 C 124 0.00 1276 reject_low 14 ALIGNMENT 0 YS2-5l11.q1k vc_4 609 574 1447 1446 C 36 0.00 1276 reject_low 10 ALIGNMENT 953 YS2-5l12.p1k chr15 41 1098 343651 344718 F 1058 97.64 1444 accept 0 ALIGNMENT 709 YS2-5l12.q1k chr15 958 30 347969 348891 C 929 93.97 1268 accept 0 ALIGNMENT 946 YS2-5l14.p1k chr11 1155 34 343419 344554 C 1122 96.52 1476 accept 0 ALIGNMENT 575 YS2-5l14.q1k chr11 1 715 339744 340462 F 715 94.41 1222 accept 0 ALIGNMENT 0 YS2-5l16.q1k vc_7 53 54 5172 6360 C 0 0.00 1035 reject_low 6 ALIGNMENT 382 YS2-5l16.q1k vc_7 527 1 2049 2569 C 527 91.84 1035 reject_vc 1 ALIGNMENT 0 YS2-5l16.q1k vc_4 305 307 1615 1878 F 3 0.00 1035 reject_low 7 ALIGNMENT 52 YS2-5l16.q1k vc_4 304 238 6273 6339 C 67 92.54 1035 reject_low 9 ALIGNMENT 52 YS2-5l16.q1k vc_4 304 238 46 112 C 67 92.54 1035 reject_low 8 ALIGNMENT 0 YS2-5l16.q1k vc_4 237 62 6340 6339 C 176 0.00 1035 reject_low 9 ALIGNMENT 0 YS2-5l16.q1k vc_7 304 304 4700 4921 C 1 0.00 1035 reject_low 6 ALIGNMENT 340 YS2-5l16.q1k vc_4 425 1 5232 5654 C 425 94.12 1035 reject_low 2 ALIGNMENT 220 YS2-5l16.q1k vc_7 303 53 4922 5172 C 251 96.02 1035|0,1 reject_low 6 ALIGNMENT 100 YS2-5l16.q1k vc_4 308 554 1879 2118 F 247 83.00 1035 reject_low 7 ALIGNMENT 274 YS2-5l16.q1k vc_2 1 303 2322 2624 F 303 97.03 1035 reject_low 4 ALIGNMENT 69 YS2-5l16.q1k vc_7 425 305 4583 4699 C 121 88.43 1035 reject_low 6 ALIGNMENT 274 YS2-5l16.q1k vc_1 1 303 2689 2991 F 303 97.03 1035 reject_low 3 ALIGNMENT 274 YS2-5l16.q1k vc_3 1 303 2689 2991 F 303 97.03 1035 reject_low 5 ALIGNMENT 0 YS2-5l16.q1k vc_4 62 237 1548 1547 F 176 0.00 1035 reject_low 7 ALIGNMENT 52 YS2-5l16.q1k vc_4 238 304 1548 1614 F 67 92.54 1035 reject_low 7 ALIGNMENT 51 YS2-5l16.q1k vc_7 54 3 6360 6411 C 52 100.00 1035|1,0 reject_low 6 ALIGNMENT 383 YS2-5l16.q1k vc_5 1 554 2556 3102 F 554 90.79 1035 reject_vc 0 ALIGNMENT 0 YS2-5l16.q1k vc_4 237 62 113 112 C 176 0.00 1035 reject_low 8 ALIGNMENT 965 YS2-5l19.p1k chr15 1144 34 610999 612120 C 1111 96.49 1426 accept 0 ALIGNMENT 627 YS2-5l19.q1k chr15 30 827 610267 611061 F 798 94.36 1288 accept 0 ALIGNMENT 0 YS2-5l24.q1k vc_5 259 190 5028 5027 C 70 0.00 1293 reject_low 12 ALIGNMENT 353 YS2-5l24.q1k vc_4 764 191 5238 5812 C 574 87.63 1293 reject_low 2 ALIGNMENT 24 YS2-5l24.q1k vc_1 189 154 2474 2509 C 36 88.89 1293 reject_low 9 ALIGNMENT 0 YS2-5l24.q1k vc_5 259 189 2 1 C 71 0.00 1293 reject_low 13 ALIGNMENT 377 YS2-5l24.q1k vc_5 191 829 2398 3033 F 639 86.85 1293 reject_vc 0 ALIGNMENT 117 YS2-5l24.q1k vc_4 191 352 6353 6514 F 162 91.36 1293 reject_low 7 ALIGNMENT 298 YS2-5l24.q1k vc_3 191 634 2531 2974 F 444 89.41 1293 reject_low 5 ALIGNMENT 298 YS2-5l24.q1k vc_1 191 634 2531 2974 F 444 89.41 1293 reject_low 3 ALIGNMENT 24 YS2-5l24.q1k vc_2 189 154 2107 2142 C 36 88.89 1293 reject_low 10 ALIGNMENT 377 YS2-5l24.q1k vc_7 829 191 2092 2727 C 639 86.85 1293 reject_vc 1 ALIGNMENT 70 YS2-5l24.q1k vc_4 277 191 1448 1534 C 87 94.25 1293 reject_low 8 ALIGNMENT 0 YS2-5l24.q1k vc_2 259 190 2108 2107 C 70 0.00 1293 reject_low 10 ALIGNMENT 0 YS2-5l24.q1k vc_4 190 190 5870 6352 F 1 0.00 1293 reject_low 7 ALIGNMENT 117 YS2-5l24.q1k vc_4 191 352 126 287 F 162 91.36 1293 reject_low 6 ALIGNMENT 0 YS2-5l24.q1k vc_3 259 190 2475 2474 C 70 0.00 1293 reject_low 11 ALIGNMENT 298 YS2-5l24.q1k vc_2 191 634 2164 2607 F 444 89.41 1293 reject_low 4 ALIGNMENT 24 YS2-5l24.q1k vc_3 189 154 2474 2509 C 36 88.89 1293 reject_low 11 ALIGNMENT 72 YS2-5l24.q1k vc_4 665 829 1888 2049 F 165 83.03 1293 reject_low 6 ALIGNMENT 0 YS2-5l24.q1k vc_1 259 190 2475 2474 C 70 0.00 1293 reject_low 9 ALIGNMENT 0 YS2-5l24.q1k vc_4 353 664 288 1887 F 312 0.00 1293 reject_low 6 ALIGNMENT 23 YS2-5l24.q1k vc_5 188 154 1 35 C 35 88.57 1293 reject_low 13 ALIGNMENT 24 YS2-5l24.q1k vc_4 154 189 5834 5869 F 36 88.89 1293 reject_low 7 ALIGNMENT 24 YS2-5l24.q1k vc_5 189 154 5027 5062 C 36 88.89 1293 reject_low 12 ALIGNMENT 562 YS2-5m03.q1k chr05 27 842 529179 529983 F 816 91.42 1336 accept 0 ALIGNMENT 888 YS2-5m03.p1k chr05 1052 33 532397 533431 C 1020 96.96 1294 accept 0 ALIGNMENT 0 YS2-5m04.p1k chr04 351 368 1019953 1019952 F 18 0.00 368 accept 0 ALIGNMENT 247 YS2-5m04.q1k vc_7 372 1 2206 2569 C 372 90.32 753 reject_vc 2 ALIGNMENT 30 YS2-5m04.q1k vc_4 242 304 1550 1611 F 63 84.13 753 reject_vc 10 ALIGNMENT 180 YS2-5m04.q1k vc_7 304 53 4924 5172 C 252 91.27 753|0,1 reject_vc 7 ALIGNMENT 23 YS2-5m04.q1k vc_4 322 372 1888 1935 F 51 86.27 753 reject_vc 10 ALIGNMENT 51 YS2-5m04.q1k vc_7 54 3 6360 6411 C 52 100.00 753|1,0 reject_vc 7 ALIGNMENT 30 YS2-5m04.q1k vc_4 304 242 49 110 C 63 84.13 753 reject_vc 8 ALIGNMENT 23 YS2-5m04.q1k vc_7 372 322 4640 4687 C 51 86.27 753 reject_vc 7 ALIGNMENT 297 YS2-5m04.p1k chr04 38 350 1019641 1019953 F 313 99.36 368 accept 0 ALIGNMENT 247 YS2-5m04.q1k vc_5 1 372 2556 2919 F 372 90.32 753 reject_vc 1 ALIGNMENT 240 YS2-5m04.q1k vc_4 372 1 5289 5654 C 372 89.78 753 reject_vc 3 ALIGNMENT 0 YS2-5m04.q1k vc_4 305 321 1612 1887 F 17 0.00 753 reject_vc 10 ALIGNMENT 234 YS2-5m04.q1k vc_1 1 304 2689 2989 F 304 93.09 753 reject_vc 4 ALIGNMENT 0 YS2-5m04.q1k vc_7 53 54 5172 6360 C 0 0.00 753 reject_vc 7 ALIGNMENT 0 YS2-5m04.q1k vc_7 321 305 4688 4923 C 17 0.00 753 reject_vc 7 ALIGNMENT 30 YS2-5m04.q1k vc_4 304 242 6276 6337 C 63 84.13 753 reject_vc 9 ALIGNMENT 234 YS2-5m04.q1k vc_2 1 304 2322 2622 F 304 93.09 753 reject_vc 5 ALIGNMENT 234 YS2-5m04.q1k vc_3 1 304 2689 2989 F 304 93.09 753 reject_vc 6 ALIGNMENT 569 YS2-5m07.q1k chr16 858 29 206273 207094 C 830 90.72 1313 accept 0 ALIGNMENT 854 YS2-5m07.p1k chr16 37 993 205840 206810 F 957 97.81 1319 accept 0 ALIGNMENT 272 YS2-5m08.q1k vc_5 1 388 2556 2935 F 388 91.49 898 reject_vc 0 ALIGNMENT 272 YS2-5m08.q1k vc_7 388 1 2190 2569 C 388 91.49 898 reject_vc 1 ALIGNMENT 39 YS2-5m08.q1k vc_4 302 239 6276 6339 C 64 87.50 898 reject_low 9 ALIGNMENT 48 YS2-5m08.q1k vc_7 54 3 6360 6411 C 52 98.08 898|1,0 reject_low 6 ALIGNMENT 256 YS2-5m08.q1k vc_3 1 302 2689 2989 F 302 95.36 898 reject_low 5 ALIGNMENT 39 YS2-5m08.q1k vc_4 239 302 1548 1611 F 64 87.50 898 reject_low 8 ALIGNMENT 205 YS2-5m08.q1k vc_7 302 53 4924 5172 C 250 94.40 898|0,1 reject_low 6 ALIGNMENT 0 YS2-5m08.q1k vc_4 62 238 1548 1547 F 177 0.00 898 reject_low 8 ALIGNMENT 256 YS2-5m08.q1k vc_1 1 302 2689 2989 F 302 95.36 898 reject_low 3 ALIGNMENT 256 YS2-5m08.q1k vc_2 1 302 2322 2622 F 302 95.36 898 reject_low 4 ALIGNMENT 39 YS2-5m08.q1k vc_4 302 239 49 112 C 64 87.50 898 reject_low 7 ALIGNMENT 0 YS2-5m08.q1k vc_4 238 62 113 112 C 177 0.00 898 reject_low 7 ALIGNMENT 265 YS2-5m08.q1k vc_4 388 1 5273 5654 C 388 90.98 898 reject_vc 2 ALIGNMENT 0 YS2-5m08.q1k vc_4 238 62 6340 6339 C 177 0.00 898 reject_low 9 ALIGNMENT 0 YS2-5m08.q1k vc_7 53 54 5172 6360 C 0 0.00 898 reject_low 6 ALIGNMENT 261 YS2-5m11.q1k vc_1 1 303 2689 2990 F 303 95.71 1000 reject_low 3 ALIGNMENT 261 YS2-5m11.q1k vc_2 1 303 2322 2623 F 303 95.71 1000 reject_low 4 ALIGNMENT 278 YS2-5m11.q1k vc_4 421 1 5237 5654 C 421 89.79 1000 reject_low 2 ALIGNMENT 283 YS2-5m11.q1k vc_7 421 1 2154 2569 C 421 90.02 1000 reject_low 1 ALIGNMENT 47 YS2-5m11.q1k vc_4 238 303 1548 1612 F 66 92.42 1000 reject_low 8 ALIGNMENT 261 YS2-5m11.q1k vc_3 1 303 2689 2990 F 303 95.71 1000 reject_low 5 ALIGNMENT 47 YS2-5m11.q1k vc_4 303 238 48 112 C 66 92.42 1000 reject_low 7 ALIGNMENT 0 YS2-5m11.q1k vc_4 62 237 1548 1547 F 176 0.00 1000 reject_low 8 ALIGNMENT 0 YS2-5m11.q1k vc_4 237 62 113 112 C 176 0.00 1000 reject_low 7 ALIGNMENT 209 YS2-5m11.q1k vc_7 303 53 4923 5172 C 251 94.82 1000|0,1 reject_low 6 ALIGNMENT 0 YS2-5m11.q1k vc_4 237 62 6340 6339 C 176 0.00 1000 reject_low 9 ALIGNMENT 283 YS2-5m11.q1k vc_5 1 475 2556 3022 F 475 87.79 1000 reject_vc 0 ALIGNMENT 0 YS2-5m11.q1k vc_7 53 54 5172 6360 C 0 0.00 1000 reject_low 6 ALIGNMENT 47 YS2-5m11.q1k vc_4 303 238 6275 6339 C 66 92.42 1000 reject_low 9 ALIGNMENT 48 YS2-5m11.q1k vc_7 54 3 6360 6411 C 52 98.08 1000|1,0 reject_low 6 ALIGNMENT 924 YS2-5m12.p1k chr15 29 1112 343652 344752 F 1084 96.31 1406 accept 0 ALIGNMENT 45 YS2-5m12.p1k chr05 708 803 175243 175338 F 96 83.33 1406 reject_low 1 ALIGNMENT 612 YS2-5m12.q1k chr15 816 13 348075 348874 C 804 94.15 1299 accept 0 ALIGNMENT 0 YS2-5m12.p1k chr05 62 707 175243 175242 F 646 0.00 1406 reject_low 1 ALIGNMENT 940 YS2-5m13.p1k chr07 33 1200 4969 6143 F 1168 94.95 1399 accept 0 ALIGNMENT 610 YS2-5m13.q1k chr11 845 30 4154 4961 C 816 93.14 1397 ambiguous_tel 1 ALIGNMENT 595 YS2-5m14.q1k chr11 761 49 279183 279892 C 713 95.37 1374 accept 0 ALIGNMENT 982 YS2-5m14.p1k chr11 33 1208 278163 279349 F 1176 95.15 1498 accept 0 ALIGNMENT 541 YS2-5m15.q1k chr04 58 825 1456298 1457059 F 768 93.36 1330 accept 0 ALIGNMENT 989 YS2-5m15.p1k chr04 1114 32 1459500 1460589 C 1083 97.51 1350 accept 0 ALIGNMENT 846 YS2-5m17.p1k chr15 30 989 891679 892652 F 960 97.19 1304 accept 0 ALIGNMENT 527 YS2-5m17.q1k chr15 799 32 896815 897586 C 768 90.89 1256 accept 0 ALIGNMENT 0 YS2-5m18.p1k chr15 717 62 355119 355118 C 656 0.00 1423 reject_low 6 ALIGNMENT 23 YS2-5m18.p1k chr14 734 782 694239 694287 F 49 85.71 1423 reject_low 2 ALIGNMENT 0 YS2-5m18.p1k chr04 716 62 323713 323712 C 655 0.00 1423 reject_low 5 ALIGNMENT 25 YS2-5m18.p1k chr15 736 782 355083 355129 F 47 87.23 1423 reject_low 1 ALIGNMENT 22 YS2-5m18.p1k chr13 750 715 388684 388719 C 36 100.00 1423 reject_low 3 ALIGNMENT 0 YS2-5m18.p1k chr14 62 733 694239 694238 F 672 0.00 1423 reject_low 2 ALIGNMENT 0 YS2-5m18.p1k chr13 714 62 388720 388719 C 653 0.00 1423 reject_low 3 ALIGNMENT 0 YS2-5m18.p1k chr04 741 62 864885 864884 C 680 0.00 1423 reject_low 7 ALIGNMENT 0 YS2-5m18.p1k chr13 62 734 388684 388683 F 673 0.00 1423 reject_low 8 ALIGNMENT 719 YS2-5m18.q1k chr04 937 28 867963 868858 C 910 94.73 1308 accept 0 ALIGNMENT 22 YS2-5m18.p1k chr13 735 769 388684 388718 F 35 100.00 1423 reject_low 8 ALIGNMENT 0 YS2-5m18.p1k chr04 744 761 864884 864883 F 18 0.00 1423 accept 0 ALIGNMENT 0 YS2-5m18.p1k chr04 62 733 323678 323677 F 672 0.00 1423 reject_low 4 ALIGNMENT 22 YS2-5m18.p1k chr04 751 717 323678 323712 C 35 100.00 1423 reject_low 5 ALIGNMENT 21 YS2-5m18.p1k chr04 771 742 864855 864884 C 30 96.67 1423 reject_low 7 ALIGNMENT 24 YS2-5m18.p1k chr04 734 773 323678 323717 F 40 95.00 1423 reject_low 4 ALIGNMENT 0 YS2-5m18.p1k chr15 62 735 355083 355082 F 674 0.00 1423 reject_low 1 ALIGNMENT 699 YS2-5m18.p1k chr04 28 743 864168 864884 F 716 99.72 1423 accept 0 ALIGNMENT 21 YS2-5m18.p1k chr15 753 718 355083 355118 C 36 100.00 1423 reject_low 6 ALIGNMENT 341 YS2-5m19.q1k vc_5 1 510 2556 3059 F 510 90.39 845 reject_vc 1 ALIGNMENT 0 YS2-5m19.q1k vc_7 53 54 5172 6360 C 0 0.00 845 reject_low 6 ALIGNMENT 51 YS2-5m19.q1k vc_7 54 3 6360 6411 C 52 100.00 845|1,0 reject_low 6 ALIGNMENT 53 YS2-5m19.q1k vc_4 239 303 1548 1612 F 65 95.38 845 reject_low 9 ALIGNMENT 53 YS2-5m19.q1k vc_4 303 239 6275 6339 C 65 95.38 845 reject_low 8 ALIGNMENT 0 YS2-5m19.q1k vc_4 238 62 6340 6339 C 177 0.00 845 reject_low 8 ALIGNMENT 0 YS2-5m19.q1k vc_7 308 304 4697 4922 C 5 0.00 845 reject_low 6 ALIGNMENT 224 YS2-5m19.q1k vc_7 303 53 4923 5172 C 251 96.81 845|0,1 reject_low 6 ALIGNMENT 54 YS2-5m19.q1k vc_7 414 309 4591 4696 C 106 84.91 845 reject_low 6 ALIGNMENT 53 YS2-5m19.q1k vc_4 303 239 48 112 C 65 95.38 845 reject_low 7 ALIGNMENT 0 YS2-5m19.q1k vc_4 238 62 113 112 C 177 0.00 845 reject_low 7 ALIGNMENT 278 YS2-5m19.q1k vc_1 1 303 2689 2990 F 303 97.69 845 reject_low 3 ALIGNMENT 321 YS2-5m19.q1k vc_4 414 1 5240 5654 C 414 93.24 845 reject_low 2 ALIGNMENT 278 YS2-5m19.q1k vc_3 1 303 2689 2990 F 303 97.69 845 reject_low 5 ALIGNMENT 278 YS2-5m19.q1k vc_2 1 303 2322 2623 F 303 97.69 845 reject_low 4 ALIGNMENT 0 YS2-5m19.q1k vc_4 304 308 1613 1878 F 5 0.00 845 reject_low 9 ALIGNMENT 64 YS2-5m19.q1k vc_4 309 510 1879 2075 F 202 80.69 845 reject_low 9 ALIGNMENT 0 YS2-5m19.q1k vc_4 62 238 1548 1547 F 177 0.00 845 reject_low 9 ALIGNMENT 341 YS2-5m19.q1k vc_7 520 1 2058 2569 C 520 90.19 845 reject_vc 0 ALIGNMENT 423 YS2-5m20.q1k chr10 604 19 729421 730008 C 586 92.15 1118 ambiguous_tel 0 ALIGNMENT 0 YS2-5m20.q1k chr14 77 116 14433 14432 F 40 0.00 1118 reject_low 3 ALIGNMENT 906 YS2-5m20.p1k chr06 1032 69 12907 13881 C 964 98.55 1362 reject_low 2 ALIGNMENT 875 YS2-5m20.p1k chr10 69 1020 728559 729519 F 952 97.79 1362 ambiguous_tel 0 ALIGNMENT 854 YS2-5m20.p1k chr04 1020 69 16196 17156 C 952 97.06 1362 ambiguous_tel 1 ALIGNMENT 255 YS2-5m20.q1k chr14 117 604 14433 14922 F 488 85.86 1118 reject_low 3 ALIGNMENT 252 YS2-5m20.q1k chr06 117 604 12530 13019 F 488 85.66 1118 reject_low 2 ALIGNMENT 891 YS2-5m20.p1k chr14 1032 69 14810 15784 C 964 98.03 1362 reject_low 3 ALIGNMENT 0 YS2-5m20.q1k chr06 77 116 12530 12529 F 40 0.00 1118 reject_low 2 ALIGNMENT 423 YS2-5m20.q1k chr04 19 604 15707 16294 F 586 92.15 1118 ambiguous_tel 1 ALIGNMENT 76 YS2-5m21.p1k chr14 707 788 632601 632682 F 82 97.56 1281 reject_low 7 ALIGNMENT 0 YS2-5m21.p1k chr12 705 62 976054 976053 C 644 0.00 1281 reject_low 3 ALIGNMENT 81 YS2-5m21.p1k chr15 704 797 487437 487530 F 94 95.74 1281 reject_low 1 ALIGNMENT 0 YS2-5m21.p1k chr16 62 706 810672 810671 F 645 0.00 1281 reject_low 5 ALIGNMENT 0 YS2-5m21.p1k chr07 62 705 731141 731140 F 644 0.00 1281 reject_low 9 ALIGNMENT 0 YS2-5m21.p1k chr07 781 798 731215 731214 F 18 0.00 1281 reject_low 9 ALIGNMENT 82 YS2-5m21.p1k chr15 703 789 228325 228410 F 87 98.85 1281 reject_low 2 ALIGNMENT 0 YS2-5m21.p1k chr15 62 702 228325 228324 F 641 0.00 1281 reject_low 2 ALIGNMENT 0 YS2-5m21.p1k chr06 706 62 137555 137554 C 645 0.00 1281 reject_low 8 ALIGNMENT 81 YS2-5m21.p1k chr14 706 789 102715 102798 F 84 98.81 1281 reject_low 4 ALIGNMENT 0 YS2-5m21.p1k chr14 62 705 102715 102714 F 644 0.00 1281 reject_low 4 ALIGNMENT 0 YS2-5m21.p1k chr03 62 706 127713 127712 F 645 0.00 1281 reject_low 6 ALIGNMENT 925 YS2-5m21.p1k chr11 33 1101 73955 75041 F 1069 97.01 1281 accept 0 ALIGNMENT 75 YS2-5m21.p1k chr07 706 780 731141 731215 F 75 100.00 1281 reject_low 9 ALIGNMENT 0 YS2-5m21.p1k chr15 62 703 487437 487436 F 642 0.00 1281 reject_low 1 ALIGNMENT 679 YS2-5m21.q1k chr11 1027 28 79086 80068 C 1000 91.70 1235 accept 0 ALIGNMENT 75 YS2-5m21.p1k chr06 787 707 137474 137554 C 81 97.53 1281 reject_low 8 ALIGNMENT 0 YS2-5m21.p1k chr14 62 706 632601 632600 F 645 0.00 1281 reject_low 7 ALIGNMENT 77 YS2-5m21.p1k chr03 707 789 127713 127795 F 83 97.59 1281 reject_low 6 ALIGNMENT 81 YS2-5m21.p1k chr12 789 706 975970 976053 C 84 98.81 1281 reject_low 3 ALIGNMENT 75 YS2-5m21.p1k chr16 707 793 810672 810756 F 87 96.55 1281 reject_low 5 ALIGNMENT 249 YS2-5m23.p1k chr07 49 711 549463 550124 F 663 80.09 1256 reject_low 1 ALIGNMENT 646 YS2-5m23.q1k chr12 868 28 816058 816896 C 841 93.34 1184 accept 0 ALIGNMENT 903 YS2-5m23.p1k chr12 31 1082 811116 812181 F 1052 96.58 1256 accept 0 ALIGNMENT 0 YS2-5m23.p1k chr07 712 772 550124 550123 F 61 0.00 1256 reject_low 1 ALIGNMENT 972 YS2-5n01.p1k chr09 83 1129 238708 239762 F 1047 98.38 1377 accept 0 ALIGNMENT 293 YS2-5n01.p1k chr05 1078 83 299946 300945 C 996 77.11 1377 reject_low 1 ALIGNMENT 819 YS2-5n01.q1k chr09 985 28 239021 239975 C 958 95.72 1235 accept 0 ALIGNMENT 275 YS2-5n01.q1k chr05 28 679 299678 300328 F 652 81.13 1235 reject_low 1 ALIGNMENT 0 YS2-5n02.p1k chr07 598 856 883822 883821 F 259 0.00 1448 reject_low 2 ALIGNMENT 692 YS2-5n02.q1k chr10 27 821 333575 334368 F 795 96.10 1293 accept 0 ALIGNMENT 0 YS2-5n02.p1k chr10 605 856 454609 454608 F 252 0.00 1448 reject_low 1 ALIGNMENT 372 YS2-5n02.p1k chr10 30 604 454036 454609 F 575 88.52 1448 reject_low 1 ALIGNMENT 323 YS2-5n02.p1k chr07 30 597 883256 883822 F 568 85.92 1448 reject_low 2 ALIGNMENT 1025 YS2-5n02.p1k chr10 1203 28 337572 338748 C 1176 96.17 1448 accept 0 ALIGNMENT 960 YS2-5n03.p1k chr11 1091 35 454783 455851 C 1057 97.82 1391 accept 0 ALIGNMENT 742 YS2-5n03.q1k chr11 26 972 454087 455022 F 947 93.98 1303 accept 0 ALIGNMENT 0 YS2-5n05.q1k vc_4 700 62 1534 1533 C 639 0.00 1281 reject_low 9 ALIGNMENT 131 YS2-5n05.q1k vc_7 954 701 2483 2726 C 254 87.01 1281 reject_low 5 ALIGNMENT 0 YS2-5n05.q1k vc_5 62 700 2399 2398 F 639 0.00 1281 reject_low 4 ALIGNMENT 0 YS2-5n05.q1k vc_4 62 700 127 126 F 639 0.00 1281 reject_low 7 ALIGNMENT 36 YS2-5n05.q1k vc_3 698 660 2474 2512 C 39 97.44 1281 reject_low 12 ALIGNMENT 0 YS2-5n05.q1k vc_1 659 62 2513 2512 C 598 0.00 1281 reject_low 11 ALIGNMENT 35 YS2-5n05.q1k vc_5 698 655 5027 5070 C 44 93.18 1281 reject_low 10 ALIGNMENT 102 YS2-5n05.q1k vc_4 701 856 6354 6505 F 156 90.38 1281 reject_low 8 ALIGNMENT 60 YS2-5n05.q1k vc_4 787 701 1448 1533 C 87 91.95 1281 reject_low 9 ALIGNMENT 33 YS2-5n05.q1k vc_7 663 698 13525 13560 F 36 97.22 1281 reject_low 14 ALIGNMENT 36 YS2-5n05.q1k vc_4 660 698 5831 5869 F 39 97.44 1281 reject_low 8 ALIGNMENT 0 YS2-5n05.q1k vc_5 654 62 44 43 C 593 0.00 1281 reject_low 13 ALIGNMENT 0 YS2-5n05.q1k vc_3 659 62 2513 2512 C 598 0.00 1281 reject_low 12 ALIGNMENT 36 YS2-5n05.q1k vc_1 698 660 2474 2512 C 39 97.44 1281 reject_low 11 ALIGNMENT 102 YS2-5n05.q1k vc_4 701 856 127 278 F 156 90.38 1281 reject_low 7 ALIGNMENT 0 YS2-5n05.q1k vc_7 700 62 2727 2726 C 639 0.00 1281 reject_low 5 ALIGNMENT 131 YS2-5n05.q1k vc_5 701 954 2399 2642 F 254 86.61 1281 reject_low 4 ALIGNMENT 0 YS2-5n05.p1k chr16 669 684 548762 548761 F 16 0.00 684 accept_chi 0 ALIGNMENT 0 YS2-5n05.q1k vc_4 700 62 5812 5811 C 639 0.00 1281 reject_low 6 ALIGNMENT 34 YS2-5n05.q1k vc_5 697 655 1 43 C 43 93.02 1281 reject_low 13 ALIGNMENT 589 YS2-5n05.q1k chr16 659 28 548130 548761 C 632 98.89 1281 accept_chi 1 ALIGNMENT 126 YS2-5n05.q1k vc_4 954 701 5566 5811 C 254 86.61 1281 reject_low 6 ALIGNMENT 131 YS2-5n05.q1k vc_3 701 954 2532 2775 F 254 86.61 1281 reject_low 3 ALIGNMENT 131 YS2-5n05.q1k vc_1 701 954 2532 2775 F 254 86.61 1281 reject_low 2 ALIGNMENT 0 YS2-5n05.q1k vc_5 654 62 5071 5070 C 593 0.00 1281 reject_low 10 ALIGNMENT 0 YS2-5n05.q1k vc_7 62 662 13525 13524 F 601 0.00 1281 reject_low 14 ALIGNMENT 0 YS2-5n05.q1k vc_3 62 700 2532 2531 F 639 0.00 1281 reject_low 3 ALIGNMENT 0 YS2-5n05.q1k vc_1 62 700 2532 2531 F 639 0.00 1281 reject_low 2 ALIGNMENT 602 YS2-5n05.p1k chr16 36 668 548130 548762 F 633 99.53 684 accept_chi 0 ALIGNMENT 0 YS2-5n05.q1k vc_4 699 700 5870 6353 F 2 0.00 1281 reject_low 8 ALIGNMENT 0 YS2-5n05.q1k vc_4 62 659 5831 5830 F 598 0.00 1281 reject_low 8 ALIGNMENT 648 YS2-5n06.q1k chr01 891 31 150078 150928 C 861 93.61 1323 accept_chi 0 ALIGNMENT 330 YS2-5n06.p1k chr14 759 40 746170 746878 C 720 83.47 1447 accept_chi 1 ALIGNMENT 0 YS2-5n07.p1k chr08 653 882 504396 504395 F 230 0.00 1506 reject_low 1 ALIGNMENT 577 YS2-5n07.q1k chr03 32 758 56249 56972 F 727 94.77 1310 accept 0 ALIGNMENT 20 YS2-5n07.p1k chr08 628 652 504372 504396 F 25 100.00 1506 reject_low 1 ALIGNMENT 1006 YS2-5n07.p1k chr03 1145 35 60272 61386 C 1111 97.57 1506 accept 0 ALIGNMENT 0 YS2-5n07.p1k chr08 62 627 504372 504371 F 566 0.00 1506 reject_low 1 ALIGNMENT 0 YS2-5n08.p1k chr02 723 741 17450 17449 F 19 0.00 741 ambiguous_tel 0 ALIGNMENT 671 YS2-5n08.p1k chr02 31 722 16759 17450 F 692 100.00 741 ambiguous_tel 0 ALIGNMENT 638 YS2-5n08.q1k chr02 713 31 16759 17442 C 683 98.98 1345 ambiguous_tel 1 ALIGNMENT 42 YS2-5n09.q1k chrm 247 176 67937 68008 C 72 87.50 1217 reject_low 12 ALIGNMENT 0 YS2-5n09.q1k chrm 369 248 67938 67937 C 122 0.00 1217 reject_low 12 ALIGNMENT 0 YS2-5n09.p1k chrm 652 409 2093 2092 C 244 0.00 652 reject_low 10 ALIGNMENT 0 YS2-5n09.q1k chrm 62 173 34265 34264 F 112 0.00 1217 reject_low 2 ALIGNMENT 45 YS2-5n09.q1k chrm 186 242 77662 77717 F 57 94.74 1217 reject_low 5,6 ALIGNMENT 0 YS2-5n09.p1k chrm 652 408 83053 83052 C 245 0.00 652 reject_low 6 ALIGNMENT 0 YS2-5n09.q1k chrm 175 62 68009 68008 C 114 0.00 1217 reject_low 12 ALIGNMENT 0 YS2-5n09.p1k chrm 652 429 34266 34265 C 224 0.00 652 accept 0 ALIGNMENT 42 YS2-5n09.p1k chrm 428 362 3036 3103 C 67 89.55 652 reject_low 11 ALIGNMENT 0 YS2-5n09.q1k chrm 62 192 10742 10741 F 131 0.00 1217 reject_low 7 ALIGNMENT 0 YS2-5n09.q1k chrm 194 62 12313 12312 C 133 0.00 1217 reject_low 13 ALIGNMENT 42 YS2-5n09.p1k chrm 428 364 34265 34328 C 65 90.77 652 accept 0 ALIGNMENT 0 YS2-5n09.p1k chrm 652 638 29609 29608 C 15 0.00 652 reject_low 1 ALIGNMENT 39 YS2-5n09.q1k chrm 195 240 83052 83097 F 46 97.83 1217 reject_low 15 ALIGNMENT 43 YS2-5n09.p1k chrm 408 361 2092 2139 C 48 97.92 652 reject_low 10 ALIGNMENT 0 YS2-5n09.q1k chrm 62 185 77662 77661 F 124 0.00 1217 reject_low 5,6 ALIGNMENT 0 YS2-5n09.q1k chrm 239 369 3101 3100 F 131 0.00 1217 reject_low 3 ALIGNMENT 41 YS2-5n09.p1k chrm 416 364 77662 77713 C 53 94.34 652 reject_low 14 ALIGNMENT 219 YS2-5n09.p1k chrm 637 364 29608 29882 C 274 99.64 652 reject_low 1 ALIGNMENT 39 YS2-5n09.q1k chrm 113 242 34857 34980 F 130 82.31 1217 reject_low 4 ALIGNMENT 0 YS2-5n09.q1k chrm 62 173 3036 3035 F 112 0.00 1217 reject_low 3 ALIGNMENT 0 YS2-5n09.p1k chrm 652 490 34858 34857 C 163 0.00 652 reject_low 2 ALIGNMENT 0 YS2-5n09.p1k chrm 652 450 8989 8988 C 203 0.00 652 reject_low 3 ALIGNMENT 0 YS2-5n09.p1k chrm 652 408 84487 84486 C 245 0.00 652 reject_low 5 ALIGNMENT 44 YS2-5n09.q1k chrm 153 240 8988 9075 F 88 85.23 1217 reject_low 8 ALIGNMENT 43 YS2-5n09.p1k chrm 449 364 8988 9073 C 86 84.88 652 reject_low 3 ALIGNMENT 0 YS2-5n09.p1k chrm 652 431 76573 76572 C 222 0.00 652 reject_low 9 ALIGNMENT 332 YS2-5n09.q1k chrm 13 523 29657 30163 F 511 96.67 1217 accept 0 ALIGNMENT 0 YS2-5n09.q1k chrm 243 369 77717 77716 F 127 0.00 1217 reject_low 5,6 ALIGNMENT 51 YS2-5n09.q1k chrm 193 256 10742 10806 F 64 93.75 1217 reject_low 7 ALIGNMENT 0 YS2-5n09.q1k chrm 243 369 34980 34979 F 127 0.00 1217 reject_low 4 ALIGNMENT 0 YS2-5n09.q1k chrm 62 112 34857 34856 F 51 0.00 1217 reject_low 4 ALIGNMENT 0 YS2-5n09.q1k chrm 241 369 83097 83096 F 129 0.00 1217 reject_low 15 ALIGNMENT 49 YS2-5n09.q1k chrm 174 262 34265 34352 F 89 87.64 1217 reject_low 2 ALIGNMENT 0 YS2-5n09.q1k chrm 241 369 9075 9074 F 129 0.00 1217 reject_low 8 ALIGNMENT 40 YS2-5n09.p1k chrm 407 364 84486 84529 C 44 100.00 652 reject_low 5 ALIGNMENT 0 YS2-5n09.p1k chrm 652 417 77663 77662 C 236 0.00 652 reject_low 14 ALIGNMENT 0 YS2-5n09.q1k chrm 62 152 8988 8987 F 91 0.00 1217 reject_low 8 ALIGNMENT 45 YS2-5n09.q1k chrm 242 195 12265 12312 C 48 100.00 1217 reject_low 13 ALIGNMENT 0 YS2-5n09.q1k chrm 369 243 12266 12265 C 127 0.00 1217 reject_low 13 ALIGNMENT 37 YS2-5n09.p1k chrm 407 364 83052 83095 C 44 97.73 652 reject_low 6 ALIGNMENT 0 YS2-5n09.q1k chrm 257 369 10806 10805 F 113 0.00 1217 reject_low 7 ALIGNMENT 48 YS2-5n09.p1k chrm 430 364 76572 76636 C 67 92.54 652 reject_low 9 ALIGNMENT 0 YS2-5n09.q1k chrm 62 194 83052 83051 F 133 0.00 1217 reject_low 15 ALIGNMENT 40 YS2-5n09.q1k chrm 174 238 3036 3101 F 65 89.23 1217 reject_low 3 ALIGNMENT 39 YS2-5n09.p1k chrm 489 364 34857 34976 C 126 82.54 652 reject_low 2 ALIGNMENT 0 YS2-5n09.q1k chrm 263 369 34352 34351 F 107 0.00 1217 reject_low 2 ALIGNMENT 0 YS2-5n09.p1k chrm 652 429 3037 3036 C 224 0.00 652 reject_low 11 ALIGNMENT 0 YS2-5n11.q1k chrm 247 92 68674 68673 C 156 0.00 1345 reject_low 12 ALIGNMENT 38 YS2-5n11.q1k chrm 315 219 2537 2639 C 97 83.51 1345 reject_low 6 ALIGNMENT 0 YS2-5n11.p1k chrm 878 808 13987 20504 C 71 0.00 1474 reject_bad_break 0 ALIGNMENT 118 YS2-5n11.q1k chrm 32 223 13439 13630 F 192 96.35 1345 reject_bad_break 0 ALIGNMENT 0 YS2-5n11.q1k chrm 327 301 50740 50725 C 27 0.00 1345 reject_low 9 ALIGNMENT 0 YS2-5n11.q1k chrm 200 92 967 966 C 109 0.00 1345 reject_low 5 ALIGNMENT 20 YS2-5n11.q1k chrm 349 328 50718 50739 C 22 100.00 1345 reject_low 9,10 ALIGNMENT 0 YS2-5n11.q1k chrm 255 92 6184 6183 C 164 0.00 1345 reject_low 7 ALIGNMENT 0 YS2-5n11.q1k chrm 207 92 50825 50824 C 116 0.00 1345 reject_low 9 ALIGNMENT 21 YS2-5n11.q1k chrm 302 325 55490 55513 F 24 95.83 1345 reject_low 4 ALIGNMENT 0 YS2-5n11.q1k chrm 226 92 84266 84265 C 135 0.00 1345 reject_low 3 ALIGNMENT 78 YS2-5n11.q1k chrm 217 315 85582 85679 F 99 94.95 1345 reject_low 2 ALIGNMENT 0 YS2-5n11.q1k chrm 421 315 6128 6127 C 107 0.00 1345 reject_low 7 ALIGNMENT 57 YS2-5n11.q1k chrm 300 208 50726 50824 C 93 89.25 1345 reject_low 9 ALIGNMENT 43 YS2-5n11.q1k chrm 304 349 53712 53757 F 46 100.00 1345 reject_low 1 ALIGNMENT 0 YS2-5n11.q1k chrm 421 353 68602 68601 C 69 0.00 1345 reject_low 12 ALIGNMENT 20 YS2-5n11.q1k chrm 272 248 68649 68673 C 25 96.00 1345 reject_low 12 ALIGNMENT 27 YS2-5n11.q1k chrm 262 201 909 966 C 62 83.87 1345 reject_low 5 ALIGNMENT 0 YS2-5n11.q1k chrm 421 308 81515 81514 C 114 0.00 1345 reject_low 8 ALIGNMENT 24 YS2-5n11.q1k chrm 255 300 55496 55540 F 46 86.96 1345|4,0 reject_low 11 ALIGNMENT 22 YS2-5n11.q1k chrm 219 262 55424 55463 F 44 90.91 1345|0,4 reject_low 11 ALIGNMENT 28 YS2-5n11.q1k chrm 262 208 56257 56309 C 55 87.27 1345 reject_low 10 ALIGNMENT 134 YS2-5n11.p1k chrm 1125 879 13733 13986 C 247 90.28 1474 reject_bad_break 0 ALIGNMENT 67 YS2-5n11.q1k chrm 347 673 13628 13960 F 327 79.82 1345 reject_bad_break 0 ALIGNMENT 0 YS2-5n11.q1k chrm 276 273 68636 68648 C 4 0.00 1345 reject_low 12 ALIGNMENT 0 YS2-5n11.q1k chrm 316 421 85679 85678 F 106 0.00 1345 reject_low 2 ALIGNMENT 0 YS2-5n11.q1k chrm 92 303 53712 53711 F 212 0.00 1345 reject_low 1 ALIGNMENT 0 YS2-5n11.q1k chrm 259 258 55460 55499 F 0 0.00 1345 reject_low 11 ALIGNMENT 23 YS2-5n11.q1k chrm 300 277 68612 68635 C 24 100.00 1345 reject_low 12 ALIGNMENT 36 YS2-5n11.q1k chrm 314 256 6127 6183 C 59 89.83 1345 reject_low 7 ALIGNMENT 0 YS2-5n11.q1k chrm 218 92 2640 2639 C 127 0.00 1345 reject_low 6 ALIGNMENT 0 YS2-5n11.q1k chrm 327 263 50740 56256 C 65 0.00 1345 reject_low 10 ALIGNMENT 0 YS2-5n11.q1k chrm 421 263 910 909 C 159 0.00 1345 reject_low 5 ALIGNMENT 0 YS2-5n11.q1k chrm 92 218 55424 55423 F 127 0.00 1345 reject_low 11 ALIGNMENT 0 YS2-5n11.q1k chrm 421 316 84179 84178 C 106 0.00 1345 reject_low 3 ALIGNMENT 0 YS2-5n11.q1k chrm 92 216 85582 85581 F 125 0.00 1345 reject_low 2 ALIGNMENT 0 YS2-5n11.q1k chrm 207 92 56310 56309 C 116 0.00 1345 reject_low 10 ALIGNMENT 0 YS2-5n11.q1k chrm 92 301 55490 55489 F 210 0.00 1345 reject_low 4 ALIGNMENT 0 YS2-5n11.q1k chrm 421 316 2538 2537 C 106 0.00 1345 reject_low 6 ALIGNMENT 0 YS2-5n11.q1k chrm 350 421 53757 53756 F 72 0.00 1345 reject_low 1 ALIGNMENT 0 YS2-5n11.q1k chrm 254 92 81567 81566 C 163 0.00 1345 reject_low 8 ALIGNMENT 0 YS2-5n11.q1k chrm 224 346 13631 13627 F 123 0.00 1345 reject_bad_break 0 ALIGNMENT 0 YS2-5n11.q1k chrm 327 301 68626 68611 C 27 0.00 1345 reject_low 12 ALIGNMENT 0 YS2-5n11.q1k chrm 326 421 55513 55512 F 96 0.00 1345 reject_low 4 ALIGNMENT 35 YS2-5n11.q1k chrm 307 255 81514 81566 C 53 88.68 1345 reject_low 8 ALIGNMENT 679 YS2-5n11.p1k chrm 807 39 20505 21272 C 769 99.09 1474 reject_bad_break 0 ALIGNMENT 0 YS2-5n11.q1k chrm 301 421 55540 55539 F 121 0.00 1345 reject_low 11 ALIGNMENT 24 YS2-5n11.q1k chrm 352 328 68601 68625 C 25 100.00 1345 reject_low 12 ALIGNMENT 0 YS2-5n11.q1k chrm 421 350 50719 50718 C 72 0.00 1345 reject_low 9,10 ALIGNMENT 70 YS2-5n11.q1k chrm 315 227 84178 84265 C 89 95.51 1345 reject_low 3 ALIGNMENT 0 YS2-5n13.p1k chr14 216 252 26446 26824 F 37 0.00 1407 reject_low 3 ALIGNMENT 361 YS2-5n13.p1k chr14 30 434 26372 26778 F 405 96.79 1407 reject_low 1 ALIGNMENT 0 YS2-5n13.p1k chr14 321 876 26892 26891 F 556 0.00 1407 reject_low 3 ALIGNMENT 656 YS2-5n13.q1k chr14 874 28 29900 30742 C 847 93.74 1292 accept 0 ALIGNMENT 0 YS2-5n13.p1k chr14 435 876 26664 26663 F 442 0.00 1407 reject_low 2 ALIGNMENT 0 YS2-5n13.p1k chr14 62 180 26411 26410 F 119 0.00 1407 accept 0 reject_low 2,3 ALIGNMENT 26 YS2-5n13.p1k chr14 253 320 26825 26892 F 68 79.41 1407 reject_low 3 ALIGNMENT 0 YS2-5n13.p1k chr14 216 366 26446 26596 F 151 0.00 1407 reject_low 2 ALIGNMENT 26 YS2-5n13.p1k chr14 367 434 26597 26664 F 68 79.41 1407 reject_low 2 ALIGNMENT 0 YS2-5n13.p1k chr14 216 252 26446 26710 F 37 0.00 1407 accept 0 ALIGNMENT 0 YS2-5n13.p1k chr14 435 876 26778 26777 F 442 0.00 1407 reject_low 1 ALIGNMENT 708 YS2-5n13.p1k chr14 253 1106 26711 27579 F 854 95.67 1407 accept 0 ALIGNMENT 20 YS2-5n13.p1k chr14 181 215 26411 26445 F 35 85.71 1407 accept 0 reject_low 2,3 ALIGNMENT 939 YS2-5n14.p1k chr11 30 1108 278162 279255 F 1079 96.20 1445 accept 0 ALIGNMENT 624 YS2-5n14.q1k chr11 842 27 279080 279892 C 816 92.77 1307 accept 0 ALIGNMENT 911 YS2-5n15.p1k chr02 1075 34 214684 215730 C 1042 96.93 1429 accept 0 ALIGNMENT 778 YS2-5n15.q1k chr02 26 978 209933 210873 F 953 95.07 1274 accept 0 ALIGNMENT 54 YS2-5n16.q1k chr12 120 27 96349 96442 C 94 86.17 1300 reject_low 3 ALIGNMENT 634 YS2-5n16.q1k chr04 25 810 45124 45909 F 786 93.89 1300 reject_low 1 ALIGNMENT 0 YS2-5n16.q1k chr12 573 121 96350 96349 C 453 0.00 1300 reject_low 3 ALIGNMENT 54 YS2-5n16.q1k chr01 120 27 140298 140391 C 94 86.17 1300 reject_low 2 ALIGNMENT 0 YS2-5n16.q1k chr01 573 121 140299 140298 C 453 0.00 1300 reject_low 2 ALIGNMENT 911 YS2-5n16.p1k chr14 1045 34 255809 256836 C 1012 97.92 1366 accept 0 ALIGNMENT 743 YS2-5n16.q1k chr14 25 874 253118 253965 F 850 96.35 1300 accept 0 ALIGNMENT 661 YS2-5n17.q1k chr14 884 26 526408 527264 C 859 93.48 1285 accept_trans 0 ALIGNMENT 923 YS2-5n17.p1k chr14 29 1080 517071 518133 F 1052 96.96 1406 accept_trans 0 ALIGNMENT 902 YS2-5n18.p1k chr09 35 1106 317119 318208 F 1072 95.71 1393 accept 0 ALIGNMENT 683 YS2-5n18.p1k chr06 844 82 220496 221258 C 763 96.46 1393 reject_low 1 ALIGNMENT 0 YS2-5n18.p1k chr06 81 62 221259 221258 C 20 0.00 1393 reject_low 1 ALIGNMENT 815 YS2-5n18.q1k chr09 1037 6 322016 323034 C 1032 94.38 1154 accept 0 ALIGNMENT 861 YS2-5n19.p1k chr15 41 1087 609078 610145 F 1047 95.51 1389 accept 0 ALIGNMENT 643 YS2-5n19.q1k chr15 857 34 609780 610598 C 824 94.05 1264 accept 0 ALIGNMENT 872 YS2-5n20.p1k chr02 992 30 168862 169832 C 963 97.61 1288 accept 0 ALIGNMENT 664 YS2-5n20.q1k chr02 31 913 164152 165025 F 883 92.98 1224 accept 0 ALIGNMENT 365 YS2-5n20.p1k chr02 483 992 414180 414697 F 510 90.98 1288 reject_low 1 ALIGNMENT 0 YS2-5n20.p1k chr02 62 482 414180 414179 F 421 0.00 1288 reject_low 1 ALIGNMENT 433 YS2-5n22.q1k scplasm1 698 26 1051 1724 C 673 89.30 1339 accept_chi 1 ALIGNMENT 707 YS2-5n22.p1k scplasm1 32 1069 1727 2770 F 1038 90.37 1354 accept_chi 0 ALIGNMENT 1000 YS2-5n24.p1k chr04 1167 40 784284 785418 C 1128 96.99 1367 accept 0 ALIGNMENT 371 YS2-5n24.q1k chr04 84 867 781367 782135 F 784 84.06 1136 accept 0 ALIGNMENT 0 YS2-5o01.p1k chr15 378 361 526701 526700 C 18 0.00 378 accept_chi 0 ALIGNMENT 302 YS2-5o01.p1k chr15 360 33 526700 527028 C 328 98.78 378 accept_chi 0 ALIGNMENT 294 YS2-5o01.q1k chr15 37 369 526706 527038 F 333 97.30 370 accept_chi 1 ALIGNMENT 683 YS2-5o02.p1k chr15 943 45 127530 128412 C 899 94.22 1466 accept 0 ALIGNMENT 907 YS2-5o03.p1k chr12 38 1129 179511 180606 F 1092 95.70 1333 accept 0 ALIGNMENT 668 YS2-5o03.q1k chr12 811 26 184292 185075 C 786 96.18 1252 accept 0 ALIGNMENT 686 YS2-5o04.q1k chr15 26 925 125611 126506 F 900 93.44 1282 accept 0 ALIGNMENT 991 YS2-5o04.p1k chr15 1167 28 127279 128430 C 1140 96.75 1361 accept 0 ALIGNMENT 939 YS2-5o05.p1k chr04 35 1120 1294860 1295954 F 1086 96.78 1368 accept 0 ALIGNMENT 728 YS2-5o05.q1k chr04 949 32 1296210 1297125 C 918 94.66 1239 accept 0 ALIGNMENT 913 YS2-5o06.p1k chr01 32 1087 144723 145795 F 1056 96.97 1335 accept 0 ALIGNMENT 521 YS2-5o06.q1k chr01 867 48 150123 150928 C 820 89.88 1378 accept 0 ALIGNMENT 921 YS2-5o07.p1k chr13 1082 37 441614 442671 C 1046 97.32 1337 accept 0 ALIGNMENT 490 YS2-5o07.q1k chr13 53 722 439563 440231 F 670 91.79 1344 accept 0 ALIGNMENT 388 YS2-5o09.q1k chr14 59 608 465630 466175 F 550 91.27 1381 accept_chi 1 ALIGNMENT 660 YS2-5o09.p1k chr14 707 31 465630 466306 C 677 100.00 708 accept_chi 0 ALIGNMENT 0 YS2-5o10.p1k vc_3 814 62 2106 2105 C 753 0.00 1433 reject_low 3 ALIGNMENT 0 YS2-5o10.p1k vc_7 62 814 13562 13561 F 753 0.00 1433 reject_low 6 ALIGNMENT 28 YS2-5o10.p1k vc_3 848 815 2438 2472 C 34 94.12 1433 reject_low 9 ALIGNMENT 0 YS2-5o10.p1k vc_1 814 62 2106 2105 C 753 0.00 1433 reject_low 1 ALIGNMENT 555 YS2-5o10.q1k chr10 751 44 434417 435118 C 708 94.49 1450 accept 0 ALIGNMENT 285 YS2-5o10.p1k vc_2 1242 815 1674 2105 C 428 90.42 1433 reject_low 2 ALIGNMENT 285 YS2-5o10.p1k vc_7 815 1242 13562 13993 F 428 90.19 1433 reject_low 6 ALIGNMENT 285 YS2-5o10.p1k vc_1 1242 815 1674 2105 C 428 90.42 1433 reject_low 1 ALIGNMENT 261 YS2-5o10.p1k vc_4 815 1171 5871 6223 F 357 91.88 1433 reject_low 7 ALIGNMENT 0 YS2-5o10.p1k vc_3 890 849 2439 2438 C 42 0.00 1433 reject_low 9 ALIGNMENT 0 YS2-5o10.p1k vc_3 814 62 2473 2472 C 753 0.00 1433 reject_low 9 ALIGNMENT 285 YS2-5o10.p1k vc_7 815 1242 100 531 F 428 90.19 1433 reject_low 5 ALIGNMENT 0 YS2-5o10.p1k vc_5 814 62 5026 5025 C 753 0.00 1433 reject_low 4 ALIGNMENT 0 YS2-5o10.p1k vc_1 814 62 2473 2472 C 753 0.00 1433 reject_low 8 ALIGNMENT 0 YS2-5o10.p1k vc_1 890 849 2439 2438 C 42 0.00 1433 reject_low 8 ALIGNMENT 285 YS2-5o10.p1k vc_5 1242 815 4594 5025 C 428 90.42 1433 reject_low 4 ALIGNMENT 0 YS2-5o10.p1k vc_2 814 62 2106 2105 C 753 0.00 1433 reject_low 2 ALIGNMENT 28 YS2-5o10.p1k vc_1 848 815 2438 2472 C 34 94.12 1433 reject_low 8 ALIGNMENT 0 YS2-5o10.p1k vc_7 62 814 100 99 F 753 0.00 1433 reject_low 5 ALIGNMENT 0 YS2-5o10.p1k vc_4 62 814 5871 5870 F 753 0.00 1433 reject_low 7 ALIGNMENT 285 YS2-5o10.p1k vc_3 1242 815 1674 2105 C 428 90.42 1433 reject_low 3 ALIGNMENT 0 YS2-5o10.p1k chr10 797 890 435117 435116 F 94 0.00 1433 accept 0 ALIGNMENT 734 YS2-5o10.p1k chr10 21 796 434340 435117 F 776 98.97 1433 accept 0 ALIGNMENT 135 YS2-5o11.q1k vc_1 1 302 2689 2987 F 302 83.44 921 reject_vc 3 ALIGNMENT 136 YS2-5o11.q1k vc_5 1 326 2556 2877 F 326 82.52 921 reject_vc 0 ALIGNMENT 129 YS2-5o11.q1k vc_4 326 1 5331 5654 C 326 81.90 921 reject_vc 2 ALIGNMENT 0 YS2-5o11.q1k vc_7 53 54 5172 6360 C 0 0.00 921 reject_low 6 ALIGNMENT 135 YS2-5o11.q1k vc_3 1 302 2689 2987 F 302 83.44 921 reject_vc 5 ALIGNMENT 136 YS2-5o11.q1k vc_7 326 1 2248 2569 C 326 82.52 921 reject_vc 1 ALIGNMENT 135 YS2-5o11.q1k vc_2 1 302 2322 2620 F 302 83.44 921 reject_vc 4 ALIGNMENT 51 YS2-5o11.q1k vc_7 54 3 6360 6411 C 52 100.00 921|1,0 reject_low 6 ALIGNMENT 81 YS2-5o11.q1k vc_7 302 53 4926 5172 C 250 79.60 921|0,1 reject_low 6 ALIGNMENT 343 YS2-5o13.p1k chr16 31 391 943805 944166 F 361 98.61 1272 reject_low 15 ALIGNMENT 914 YS2-5o13.p1k chr10 1031 31 4687 5693 C 1001 97.50 1272 ambiguous_tel 8 ALIGNMENT 0 YS2-5o13.p1k chr05 876 862 4559 4554 C 15 0.00 1272 reject_low 9 ALIGNMENT 945 YS2-5o13.p1k chr15 31 1031 1085906 1086911 F 1001 98.50 1272 ambiguous_tel 2 ALIGNMENT 341 YS2-5o13.p1k chr08 31 391 558259 558619 F 361 98.34 1272 reject_low 17 ALIGNMENT 0 YS2-5o13.p1k chr13 864 392 3888 3887 C 473 0.00 1272 reject_low 14 ALIGNMENT 574 YS2-5o13.p1k chr05 768 31 4588 5293 C 738 94.44 1272 reject_low 9 ALIGNMENT 0 YS2-5o13.p1k chr16 392 864 944166 944165 F 473 0.00 1272 reject_low 15 ALIGNMENT 945 YS2-5o13.p1k chr04 31 1031 1526741 1527746 F 1001 98.50 1272 ambiguous_tel 0 ALIGNMENT 341 YS2-5o13.p1k chr06 389 31 3050 3409 C 359 98.61 1272 reject_low 18 ALIGNMENT 344 YS2-5o13.p1k chr13 391 31 3887 4247 C 361 98.61 1272 reject_low 14 ALIGNMENT 0 YS2-5o13.p1k chr08 392 864 558619 558618 F 473 0.00 1272 reject_low 17 ALIGNMENT 29 YS2-5o13.p1k chr05 861 827 4555 4589 C 35 94.29 1272 reject_low 9 ALIGNMENT 344 YS2-5o13.p1k chr12 391 31 4011 4371 C 361 98.61 1272 reject_low 12 ALIGNMENT 918 YS2-5o13.p1k chr07 31 1031 1085647 1086652 F 1001 97.60 1272 ambiguous_tel 4 ALIGNMENT 113 YS2-5o13.p1k chr12 877 1031 1067125 1067284 F 155 92.26 1272 reject_low 10 ALIGNMENT 0 YS2-5o13.p1k chr08 864 392 3744 3743 C 473 0.00 1272 reject_low 11 ALIGNMENT 344 YS2-5o13.p1k chr08 391 31 3743 4103 C 361 98.61 1272 reject_low 11 ALIGNMENT 918 YS2-5o13.p1k chr05 31 1031 571570 572575 F 1001 97.60 1272 ambiguous_tel 3 ALIGNMENT 914 YS2-5o13.p1k chr09 1031 31 4704 5710 C 1001 97.50 1272 ambiguous_tel 7 ALIGNMENT 918 YS2-5o13.p1k chr14 1031 31 4316 5321 C 1001 97.60 1272 ambiguous_tel 5 ALIGNMENT 574 YS2-5o13.p1k chr12 31 768 1066390 1067095 F 738 94.44 1272 reject_low 10 ALIGNMENT 341 YS2-5o13.p1k chr02 391 31 4212 4572 C 361 98.34 1272 reject_low 16 ALIGNMENT 116 YS2-5o13.p1k chr05 1031 877 4399 4558 C 155 92.90 1272 reject_low 9 ALIGNMENT 0 YS2-5o13.p1k chr12 862 876 1067129 1067124 F 15 0.00 1272 reject_low 10 ALIGNMENT 0 YS2-5o13.p1k chr02 864 392 4213 4212 C 473 0.00 1272 reject_low 16 ALIGNMENT 945 YS2-5o13.p1k chr12 31 1031 1072942 1073947 F 1001 98.50 1272 ambiguous_tel 1 ALIGNMENT 0 YS2-5o13.p1k chr12 864 392 9547 9546 C 473 0.00 1272 reject_low 13 ALIGNMENT 0 YS2-5o13.p1k chr12 864 392 4012 4011 C 473 0.00 1272 reject_low 12 ALIGNMENT 29 YS2-5o13.p1k chr12 827 861 1067094 1067128 F 35 94.29 1272 reject_low 10 ALIGNMENT 0 YS2-5o13.p1k chr05 826 769 4590 4587 C 58 0.00 1272 reject_low 9 ALIGNMENT 0 YS2-5o13.p1k chr06 864 390 3051 3050 C 475 0.00 1272 reject_low 18 ALIGNMENT 918 YS2-5o13.p1k chr16 1031 31 4225 5230 C 1001 97.60 1272 ambiguous_tel 6 ALIGNMENT 0 YS2-5o13.p1k chr12 769 826 1067096 1067093 F 58 0.00 1272 reject_low 10 ALIGNMENT 344 YS2-5o13.p1k chr12 391 31 9546 9906 C 361 98.61 1272 reject_low 13 ALIGNMENT 548 YS2-5o15.q1k chr14 53 794 707986 708725 F 742 92.18 1316 accept 0 ALIGNMENT 914 YS2-5o15.p1k chr14 1029 30 711241 712250 C 1000 98.10 1327 accept 0 ALIGNMENT 977 YS2-5o17.p1k chr10 1168 32 191150 192301 C 1137 95.95 1348 accept 0 ALIGNMENT 458 YS2-5o17.q1k chr10 16 745 189437 190159 F 730 88.77 1210 accept 0 ALIGNMENT 205 YS2-5o18.p1k chr04 214 572 864332 864691 F 359 85.79 1399 accept 0 ALIGNMENT 122 YS2-5o19.p1k chr11 516 737 617795 618016 F 222 85.14 1369 reject_low 8 ALIGNMENT 23 YS2-5o19.p1k chr12 974 1072 64066 64164 F 99 75.76 1369 reject_low 16 ALIGNMENT 0 YS2-5o19.p1k chr12 62 973 64066 64065 F 912 0.00 1369 reject_low 16 ALIGNMENT 0 YS2-5o19.p1k chr11 62 288 617796 617795 F 227 0.00 1369 reject_low 10 ALIGNMENT 0 YS2-5o19.p1k chr11 738 834 618016 618015 F 97 0.00 1369 reject_low 8 ALIGNMENT 0 YS2-5o19.p1k chr09 288 62 69371 69370 C 227 0.00 1369 reject_low 9 ALIGNMENT 122 YS2-5o19.p1k chr12 289 518 64978 65207 F 230 84.78 1369 reject_low 7 ALIGNMENT 0 YS2-5o19.p1k chr12 747 834 65207 65206 F 88 0.00 1369 reject_low 4 ALIGNMENT 280 YS2-5o19.p1k chr12 517 1087 64066 64636 F 571 83.54 1369 reject_low 3 ALIGNMENT 40 YS2-5o19.p1k chr09 1070 973 69274 69371 C 98 80.61 1369 reject_low 15 ALIGNMENT 779 YS2-5o19.p1k chr12 30 1186 63806 64969 F 1157 90.15 1369 accept 0 ALIGNMENT 97 YS2-5o19.p1k chr11 289 502 617796 618009 F 214 82.24 1369 reject_low 10 ALIGNMENT 0 YS2-5o19.p1k chr12 289 62 499177 499176 C 228 0.00 1369 reject_low 14 ALIGNMENT 116 YS2-5o19.p1k chr12 745 518 498949 499176 C 228 83.77 1369 reject_low 14 ALIGNMENT 0 YS2-5o19.p1k chr12 62 516 64066 64065 F 455 0.00 1369 reject_low 3 ALIGNMENT 541 YS2-5o19.p1k chr12 289 975 64522 65207 F 687 93.45 1369 reject_low 1 ALIGNMENT 129 YS2-5o19.p1k chr12 517 290 498949 499176 C 228 85.96 1369 reject_low 14 ALIGNMENT 0 YS2-5o19.p1k chr12 62 288 64522 64521 F 227 0.00 1369 reject_low 1 ALIGNMENT 181 YS2-5o19.p1k chr12 745 1104 64066 64426 F 360 84.44 1369 reject_low 5 ALIGNMENT 95 YS2-5o19.p1k chr12 974 783 498949 499139 C 192 84.38 1369 reject_low 11 ALIGNMENT 0 YS2-5o19.p1k chr09 776 62 69339 69338 C 715 0.00 1369 reject_low 13 ALIGNMENT 237 YS2-5o19.p1k chr12 289 746 64750 65207 F 458 84.28 1369 reject_low 4 ALIGNMENT 0 YS2-5o19.p1k chr11 62 743 617795 617794 F 682 0.00 1369 reject_low 12 ALIGNMENT 0 YS2-5o19.p1k chr12 834 746 498950 498949 C 89 0.00 1369 reject_low 14 ALIGNMENT 117 YS2-5o19.p1k chr09 509 289 69150 69370 C 221 84.62 1369 reject_low 9 ALIGNMENT 0 YS2-5o19.p1k chr12 782 62 499140 499139 C 721 0.00 1369 reject_low 11 ALIGNMENT 88 YS2-5o19.p1k chr09 966 777 69150 69338 C 190 83.16 1369 reject_low 13 ALIGNMENT 0 YS2-5o19.p1k chr09 515 62 69372 69371 C 454 0.00 1369 reject_low 6 ALIGNMENT 0 YS2-5o19.p1k chr09 834 737 69152 69151 C 98 0.00 1369 reject_low 6 ALIGNMENT 124 YS2-5o19.p1k chr09 736 516 69151 69371 C 221 85.52 1369 reject_low 6 ALIGNMENT 0 YS2-5o19.p1k chr12 62 744 64066 64065 F 683 0.00 1369 reject_low 5 ALIGNMENT 0 YS2-5o19.p1k chr12 62 288 64294 64293 F 227 0.00 1369 reject_low 2 ALIGNMENT 0 YS2-5o19.p1k chr12 62 288 64750 64749 F 227 0.00 1369 reject_low 4 ALIGNMENT 0 YS2-5o19.p1k chr11 62 515 617795 617794 F 454 0.00 1369 reject_low 8 ALIGNMENT 355 YS2-5o19.p1k chr12 289 1095 64294 65100 F 807 81.78 1369 reject_low 2 ALIGNMENT 0 YS2-5o19.p1k chr12 62 288 64978 64977 F 227 0.00 1369 reject_low 7 ALIGNMENT 0 YS2-5o19.p1k chr11 503 834 618009 618008 F 332 0.00 1369 reject_low 10 ALIGNMENT 0 YS2-5o19.p1k chr09 834 510 69151 69150 C 325 0.00 1369 reject_low 9 ALIGNMENT 0 YS2-5o19.p1k chr12 519 834 65207 65206 F 316 0.00 1369 reject_low 7 ALIGNMENT 91 YS2-5o19.p1k chr11 744 965 617795 618015 F 222 81.08 1369 reject_low 12 ALIGNMENT 0 YS2-5o19.p1k chr12 517 518 499177 498948 C 0 0.00 1369 reject_low 14 ALIGNMENT 488 YS2-5o19.q1k chr12 777 155 69897 70514 C 623 94.38 1343 accept 0 ALIGNMENT 0 YS2-5o19.p1k chr09 972 62 69372 69371 C 911 0.00 1369 reject_low 15 ALIGNMENT 994 YS2-5o22.p1k chr12 34 1188 141572 142738 F 1155 97.06 1412 accept 0 ALIGNMENT 570 YS2-5o22.q1k chr12 819 48 142813 143581 C 772 92.36 1413 accept 0 ALIGNMENT 567 YS2-5o23.q1k chr15 53 695 758478 759119 F 643 97.05 1332 accept 0 ALIGNMENT 38 YS2-5o24.q1k vc_2 356 315 2107 2148 C 42 97.62 1157 reject_low 13 ALIGNMENT 33 YS2-5o24.q1k vc_7 321 356 13525 13560 F 36 97.22 1157 reject_low 16 ALIGNMENT 0 YS2-5o24.p1k chr08 350 367 294537 294536 F 18 0.00 367 accept_chi 0 ALIGNMENT 127 YS2-5o24.q1k vc_4 358 519 126 287 F 162 93.21 1157 reject_low 8 ALIGNMENT 269 YS2-5o24.q1k vc_4 843 358 5331 5812 C 486 86.42 1157 reject_low 4 ALIGNMENT 73 YS2-5o24.q1k vc_4 444 358 1448 1534 C 87 95.40 1157 reject_low 11 ALIGNMENT 0 YS2-5o24.q1k vc_7 568 569 5172 6360 C 0 0.00 1157 reject_low 10 ALIGNMENT 276 YS2-5o24.q1k vc_5 358 843 2398 2877 F 486 86.83 1157 reject_low 2 ALIGNMENT 38 YS2-5o24.q1k vc_1 356 315 2474 2515 C 42 97.62 1157 reject_low 12 ALIGNMENT 48 YS2-5o24.q1k vc_7 569 518 6360 6411 C 52 98.08 1157|1,0 reject_low 10 ALIGNMENT 276 YS2-5o24.q1k vc_7 843 358 2248 2727 C 486 86.83 1157 reject_low 3 ALIGNMENT 38 YS2-5o24.q1k vc_4 315 356 5828 5869 F 42 97.62 1157 reject_low 9 ALIGNMENT 273 YS2-5o24.q1k vc_2 358 817 2164 2618 F 460 87.61 1157 reject_low 6 ALIGNMENT 273 YS2-5o24.q1k vc_1 358 817 2531 2985 F 460 87.61 1157 reject_low 5 ALIGNMENT 33 YS2-5o24.q1k vc_5 355 320 1 36 C 36 97.22 1157 reject_low 17 ALIGNMENT 0 YS2-5o24.q1k vc_4 357 357 5870 6352 F 1 0.00 1157 reject_low 9 ALIGNMENT 98 YS2-5o24.q1k vc_7 817 568 4928 5172 C 250 81.60 1157|0,1 reject_low 10 ALIGNMENT 38 YS2-5o24.q1k vc_3 356 315 2474 2515 C 42 97.62 1157 reject_low 14 ALIGNMENT 300 YS2-5o24.p1k chr08 37 349 294224 294537 F 313 99.68 367 accept_chi 0 ALIGNMENT 34 YS2-5o24.q1k vc_5 356 320 5027 5063 C 37 97.30 1157 reject_low 15 ALIGNMENT 273 YS2-5o24.q1k vc_3 358 817 2531 2985 F 460 87.61 1157 reject_low 7 ALIGNMENT 127 YS2-5o24.q1k vc_4 358 519 6353 6514 F 162 93.21 1157 reject_low 9 ALIGNMENT 187 YS2-5o24.q1k chr08 317 1 294224 294534 C 317 88.33 1157 accept_chi 1 ALIGNMENT 579 YS2-5p01.q1k chr07 966 30 23058 23976 C 937 88.90 1205 accept 0 ALIGNMENT 979 YS2-5p01.p1k chr07 26 1251 19416 20646 F 1226 94.78 1429 accept 0 ALIGNMENT 0 YS2-5p03.p1k vc_4 62 903 5871 5870 F 842 0.00 1377 reject_vc 3 ALIGNMENT 26 YS2-5p03.p1k vc_1 934 904 2441 2472 C 31 96.77 1377 reject_low 7 ALIGNMENT 0 YS2-5p03.p1k vc_2 903 62 2106 2105 C 842 0.00 1377 reject_vc 1 ALIGNMENT 0 YS2-5p03.p1k vc_7 62 903 100 99 F 842 0.00 1377 reject_vc 5 ALIGNMENT 0 YS2-5p03.p1k vc_5 903 62 5026 5025 C 842 0.00 1377 reject_vc 4 ALIGNMENT 0 YS2-5p03.p1k vc_1 903 62 2106 2105 C 842 0.00 1377 reject_vc 0 ALIGNMENT 152 YS2-5p03.p1k vc_4 904 1115 5871 6088 F 212 91.51 1377 reject_vc 3 ALIGNMENT 152 YS2-5p03.p1k vc_7 904 1115 100 317 F 212 91.51 1377 reject_vc 5 ALIGNMENT 152 YS2-5p03.p1k vc_7 904 1115 13562 13779 F 212 91.51 1377 reject_vc 6 ALIGNMENT 0 YS2-5p03.p1k vc_3 903 62 2106 2105 C 842 0.00 1377 reject_vc 2 ALIGNMENT 152 YS2-5p03.p1k vc_1 1115 904 1888 2105 C 212 91.51 1377 reject_vc 0 ALIGNMENT 0 YS2-5p03.p1k vc_1 903 62 2473 2472 C 842 0.00 1377 reject_low 7 ALIGNMENT 0 YS2-5p03.p1k vc_3 903 62 2473 2472 C 842 0.00 1377 reject_low 8 ALIGNMENT 152 YS2-5p03.p1k vc_2 1115 904 1888 2105 C 212 91.51 1377 reject_vc 1 ALIGNMENT 26 YS2-5p03.p1k vc_3 934 904 2441 2472 C 31 96.77 1377 reject_low 8 ALIGNMENT 0 YS2-5p03.p1k vc_7 62 903 13562 13561 F 842 0.00 1377 reject_vc 6 ALIGNMENT 152 YS2-5p03.p1k vc_5 1115 904 4808 5025 C 212 91.51 1377 reject_vc 4 ALIGNMENT 152 YS2-5p03.p1k vc_3 1115 904 1888 2105 C 212 91.51 1377 reject_vc 2 ALIGNMENT 150 YS2-5p04.p1k chr11 194 35 315609 315769 C 160 99.38 213 accept 0 ALIGNMENT 0 YS2-5p04.p1k chr11 213 195 315610 315609 C 19 0.00 213 accept 0 ALIGNMENT 726 YS2-5p05.q1k chr08 21 953 218062 218989 F 933 93.46 1272 accept 0 ALIGNMENT 941 YS2-5p05.p1k chr08 1039 34 221308 222317 C 1006 98.81 1383 accept 0 ALIGNMENT 751 YS2-5p06.p1k chr14 1025 32 745879 746885 C 994 93.86 1317 accept 0 ALIGNMENT 684 YS2-5p06.q1k chr14 7 894 742341 743219 F 888 94.26 1292 accept 0 ALIGNMENT 979 YS2-5p07.p1k chr13 32 1201 313258 314437 F 1170 95.81 1418 accept 0 ALIGNMENT 620 YS2-5p07.q1k chr13 797 1 316896 317693 C 797 93.85 1263 accept 0 ALIGNMENT 473 YS2-5p09.q1k chrm 7 760 22364 23110 F 754 93.37 1189 accept 0 ALIGNMENT 0 YS2-5p09.p1k chrm 449 62 23373 23372 C 388 0.00 1502 reject_low 1 ALIGNMENT 842 YS2-5p09.p1k chrm 1151 35 22685 23787 C 1117 97.67 1502 accept 0 ALIGNMENT 77 YS2-5p09.p1k chrm 536 450 23286 23372 C 87 100.00 1502 reject_low 1 ALIGNMENT 0 YS2-5p09.p1k chrm 864 537 23287 23286 C 328 0.00 1502 reject_low 1 ALIGNMENT 503 YS2-5p10.q1k chr02 574 9 89038 89603 C 566 97.53 1228 accept 0 ALIGNMENT 51 YS2-5p10.q1k chr05 485 574 363093 363181 F 90 86.67 1228 reject_low 1 ALIGNMENT 0 YS2-5p10.q1k chr05 62 484 363093 363092 F 423 0.00 1228 reject_low 1 ALIGNMENT 946 YS2-5p10.p1k chr02 36 1112 86298 87386 F 1077 97.12 1363 accept 0 ALIGNMENT 0 YS2-5p11.q1k vc_4 237 62 6340 6339 C 176 0.00 888 reject_low 9 ALIGNMENT 58 YS2-5p11.q1k vc_4 238 302 1548 1612 F 65 96.92 888 reject_low 6 ALIGNMENT 0 YS2-5p11.q1k vc_4 237 62 113 112 C 176 0.00 888 reject_low 8 ALIGNMENT 0 YS2-5p11.q1k vc_4 62 237 1548 1547 F 176 0.00 888 reject_low 6 ALIGNMENT 0 YS2-5p11.q1k vc_4 303 307 1613 1878 F 5 0.00 888 reject_low 6 ALIGNMENT 58 YS2-5p11.q1k vc_4 302 238 6275 6339 C 65 96.92 888 reject_low 9 ALIGNMENT 58 YS2-5p11.q1k vc_4 302 238 48 112 C 65 96.92 888 reject_low 8 ALIGNMENT 289 YS2-5p11.q1k vc_3 1 302 2689 2990 F 302 98.68 888 reject_low 5 ALIGNMENT 0 YS2-5p11.q1k vc_7 53 54 5172 6360 C 0 0.00 888 reject_low 7 ALIGNMENT 234 YS2-5p11.q1k vc_7 302 53 4923 5172 C 250 98.00 888|0,1 reject_low 7 ALIGNMENT 289 YS2-5p11.q1k vc_1 1 302 2689 2990 F 302 98.68 888 reject_low 3 ALIGNMENT 443 YS2-5p11.q1k vc_7 593 1 1978 2569 C 593 92.24 888 reject_low 1 ALIGNMENT 51 YS2-5p11.q1k vc_7 54 3 6360 6411 C 52 100.00 888|1,0 reject_low 7 ALIGNMENT 0 YS2-5p11.q1k vc_7 304 303 4700 4922 C 2 0.00 888 reject_low 7 ALIGNMENT 89 YS2-5p11.q1k vc_7 421 305 4583 4699 C 117 93.16 888 reject_low 7 ALIGNMENT 289 YS2-5p11.q1k vc_2 1 302 2322 2623 F 302 98.68 888 reject_low 4 ALIGNMENT 371 YS2-5p11.q1k vc_4 421 1 5232 5654 C 421 96.44 888 reject_low 2 ALIGNMENT 445 YS2-5p11.q1k vc_5 1 656 2556 3211 F 656 90.09 888 reject_vc 0 ALIGNMENT 147 YS2-5p11.q1k vc_4 308 656 1879 2227 F 349 82.81 888 reject_low 6 ALIGNMENT 641 YS2-5p12.q1k chr08 825 7 180698 181516 C 819 93.89 1225 accept 0 ALIGNMENT 902 YS2-5p12.p1k chr08 33 987 180581 181535 F 955 99.16 1486 accept 0 ALIGNMENT 955 YS2-5p14.p1k chr15 1166 35 99631 100773 C 1132 96.02 1441 accept 0 ALIGNMENT 688 YS2-5p14.q1k chr15 56 910 95246 96096 F 855 94.74 1294 accept 0 ALIGNMENT 248 YS2-5p16.q1k vc_5 1 436 2556 2985 F 436 87.16 857 reject_vc 0 ALIGNMENT 237 YS2-5p16.q1k vc_4 426 1 5233 5654 C 426 86.85 857 reject_vc 1 ALIGNMENT 47 YS2-5p16.q1k vc_7 54 3 6360 6411 C 52 98.08 857|1,0 reject_low 6 ALIGNMENT 0 YS2-5p16.q1k vc_7 53 54 5172 6360 C 0 0.00 857 reject_low 6 ALIGNMENT 243 YS2-5p16.q1k vc_7 399 1 2175 2569 C 399 88.22 857 reject_vc 2 ALIGNMENT 223 YS2-5p16.q1k vc_1 1 292 2689 2980 F 292 92.81 857 reject_low 3 ALIGNMENT 223 YS2-5p16.q1k vc_2 1 292 2322 2613 F 292 92.81 857 reject_low 4 ALIGNMENT 172 YS2-5p16.q1k vc_7 292 53 4933 5172 C 240 91.25 857|0,1 reject_low 6 ALIGNMENT 223 YS2-5p16.q1k vc_3 1 292 2689 2980 F 292 92.81 857 reject_low 5 ALIGNMENT 0 YS2-5p17.q1k vc_4 237 62 6340 6339 C 176 0.00 1077 reject_low 9 ALIGNMENT 51 YS2-5p17.q1k vc_7 54 3 6360 6411 C 52 100.00 1077|1,0 reject_low 7 ALIGNMENT 107 YS2-5p17.q1k vc_7 421 305 4583 4699 C 117 97.44 1077 reject_low 7 ALIGNMENT 493 YS2-5p17.q1k vc_7 677 1 1906 2569 C 677 92.32 1077 reject_vc 1 ALIGNMENT 0 YS2-5p17.q1k vc_4 62 237 1548 1547 F 176 0.00 1077 reject_low 3 ALIGNMENT 65 YS2-5p17.q1k vc_4 304 238 6273 6339 C 67 100.00 1077 reject_low 9 ALIGNMENT 65 YS2-5p17.q1k vc_4 304 238 46 112 C 67 100.00 1077 reject_low 8 ALIGNMENT 241 YS2-5p17.q1k vc_7 303 53 4922 5172 C 251 98.80 1077|0,1 reject_low 7 ALIGNMENT 296 YS2-5p17.q1k vc_2 1 303 2322 2624 F 303 99.34 1077 reject_low 5 ALIGNMENT 65 YS2-5p17.q1k vc_4 238 304 1548 1614 F 67 100.00 1077 reject_low 3 ALIGNMENT 493 YS2-5p17.q1k vc_5 1 677 2556 3219 F 677 92.32 1077 reject_vc 0 ALIGNMENT 0 YS2-5p17.q1k vc_7 53 54 5172 6360 C 0 0.00 1077 reject_low 7 ALIGNMENT 398 YS2-5p17.q1k vc_4 421 1 5232 5654 C 421 98.34 1077 reject_low 2 ALIGNMENT 188 YS2-5p17.q1k vc_4 308 677 1879 2235 F 370 86.49 1077 reject_low 3 ALIGNMENT 296 YS2-5p17.q1k vc_3 1 303 2689 2991 F 303 99.34 1077 reject_low 6 ALIGNMENT 296 YS2-5p17.q1k vc_1 1 303 2689 2991 F 303 99.34 1077 reject_low 4 ALIGNMENT 0 YS2-5p17.q1k vc_4 305 307 1615 1878 F 3 0.00 1077 reject_low 3 ALIGNMENT 0 YS2-5p17.q1k vc_7 304 304 4700 4921 C 1 0.00 1077 reject_low 7 ALIGNMENT 0 YS2-5p17.q1k vc_4 237 62 113 112 C 176 0.00 1077 reject_low 8 ALIGNMENT 403 YS2-5p19.q1k chr16 660 48 548127 548731 C 613 90.38 1330 accept 0 ALIGNMENT 978 YS2-5p19.p1k chr16 39 1113 544363 545445 F 1075 97.86 1408 accept 0 ALIGNMENT 573 YS2-5p20.q1k chr12 4 765 457853 458613 F 762 92.91 1291 accept 0 ALIGNMENT 573 YS2-5p20.q1k chr12 4 765 466990 467750 F 762 92.91 1291 reject_low 2 ALIGNMENT 949 YS2-5p20.p1k chr12 1047 30 453569 454590 C 1018 98.33 1403 reject_low 1 ALIGNMENT 949 YS2-5p20.p1k chr12 1047 30 462706 463727 C 1018 98.33 1403 accept 0 ALIGNMENT 603 YS2-5p22.q1k chr12 24 868 267755 268591 F 845 92.78 1268 accept 0 ALIGNMENT 957 YS2-5p22.p1k chr12 1119 34 269616 270716 C 1086 97.15 1377 accept 0 ALIGNMENT 485 YS2-5p23.q1k chr02 64 821 790199 790953 F 758 88.65 1416 accept 0 ALIGNMENT 849 YS2-5p23.p1k chr02 1009 34 793700 794691 C 976 96.72 1245 accept 0 ALIGNMENT 121 YS2-6a03.q1k chr01 527 95 139852 140284 C 433 76.91 1390 reject_low 1 ALIGNMENT 910 YS2-6a03.p1k chr02 72 1099 79239 80267 F 1028 97.96 1334 accept 0 ALIGNMENT 501 YS2-6a03.q1k chr02 847 49 84555 85336 C 799 89.49 1390 accept 0 ALIGNMENT 394 YS2-6a04.p1k vc_3 623 1 1142 1749 C 623 89.73 786 reject_low 6 ALIGNMENT 37 YS2-6a04.q1k vc_2 301 261 2105 2145 C 41 97.56 1441 reject_low 17 ALIGNMENT 37 YS2-6a04.q1k vc_3 301 261 2472 2512 C 41 97.56 1441 reject_low 18 ALIGNMENT 394 YS2-6a04.p1k vc_1 623 1 1142 1749 C 623 89.73 786 reject_low 4 ALIGNMENT 63 YS2-6a04.q1k vc_7 733 513 4956 5171 C 221 78.28 1441 reject_low 15 ALIGNMENT 145 YS2-6a04.q1k vc_4 301 462 126 287 F 162 96.91 1441 reject_low 12 ALIGNMENT 396 YS2-6a04.p1k vc_6 1 623 3712 4319 F 623 90.21 786 reject_low 3 ALIGNMENT 36 YS2-6a04.q1k vc_5 301 263 5025 5063 C 39 97.44 1441 reject_low 19 ALIGNMENT 37 YS2-6a04.q1k vc_1 301 261 2472 2512 C 41 97.56 1441 reject_low 16 ALIGNMENT 253 YS2-6a04.q1k vc_7 733 301 2301 2727 C 433 87.53 1441 reject_vc 1 ALIGNMENT 171 YS2-6a04.q1k chr13 50 261 103408 103613 F 212 96.23 1441 accept 2 ALIGNMENT 397 YS2-6a04.p1k vc_5 623 1 4062 4669 C 623 89.89 786 reject_vc 0 ALIGNMENT 0 YS2-6a04.q1k vc_7 512 513 5172 6359 C 0 0.00 1441 reject_low 15 ALIGNMENT 394 YS2-6a04.p1k vc_2 623 1 1142 1749 C 623 89.73 786 reject_low 5 ALIGNMENT 0 YS2-6a04.q1k vc_4 302 301 5872 6353 F 0 0.00 1441 reject_low 13 ALIGNMENT 253 YS2-6a04.q1k vc_5 301 733 2398 2824 F 433 87.53 1441 reject_vc 0 ALIGNMENT 37 YS2-6a04.q1k vc_4 261 301 5831 5871 F 41 97.56 1441 reject_low 13 ALIGNMENT 387 YS2-6a04.p1k vc_7 1 623 456 1063 F 623 89.73 786 reject_vc 1 ALIGNMENT 81 YS2-6a04.q1k vc_4 389 301 1446 1534 C 89 97.75 1441 reject_low 14 ALIGNMENT 253 YS2-6a04.q1k vc_3 301 733 2531 2957 F 433 87.53 1441 reject_low 11 ALIGNMENT 48 YS2-6a04.q1k vc_7 512 461 6360 6411 C 52 98.08 1441 reject_low 15 ALIGNMENT 33 YS2-6a04.q1k vc_5 298 263 1 36 C 36 97.22 1441 reject_low 21 ALIGNMENT 254 YS2-6a04.q1k vc_4 733 301 5384 5812 C 433 87.53 1441 reject_low 8 ALIGNMENT 253 YS2-6a04.q1k vc_1 301 733 2531 2957 F 433 87.53 1441 reject_low 9 ALIGNMENT 253 YS2-6a04.q1k vc_2 301 733 2164 2590 F 433 87.53 1441 reject_low 10 ALIGNMENT 387 YS2-6a04.p1k vc_7 1 623 13918 14525 F 623 89.73 786 reject_low 7 ALIGNMENT 145 YS2-6a04.q1k vc_4 301 462 6353 6514 F 162 96.91 1441|1,0 reject_low 13 ALIGNMENT 35 YS2-6a04.q1k vc_7 264 301 13525 13562 F 38 97.37 1441 reject_low 20 ALIGNMENT 496 YS2-6a05.q1k chr16 728 51 508710 509380 C 678 92.63 1352 accept 0 ALIGNMENT 995 YS2-6a05.p1k chr16 71 1134 502928 503993 F 1064 98.12 1342 accept 0 ALIGNMENT 0 YS2-6a09.q1k vc_5 366 137 35 34 C 230 0.00 1324 reject_low 15 ALIGNMENT 0 YS2-6a09.q1k vc_4 403 403 5871 6353 F 1 0.00 1324 reject_low 9 ALIGNMENT 119 YS2-6a09.q1k vc_2 404 722 2165 2471 F 319 81.82 1324 reject_low 3 ALIGNMENT 63 YS2-6a09.q1k vc_4 491 404 1446 1533 C 88 90.91 1324 reject_low 14 ALIGNMENT 119 YS2-6a09.q1k vc_7 722 404 2420 2726 C 319 81.82 1324 reject_low 6 ALIGNMENT 0 YS2-6a09.q1k vc_2 137 403 2165 2164 F 267 0.00 1324 reject_low 3 ALIGNMENT 30 YS2-6a09.q1k vc_4 367 402 5835 5870 F 36 94.44 1324 reject_low 9 ALIGNMENT 28 YS2-6a09.q1k vc_5 400 367 1 34 C 34 94.12 1324 reject_low 15 ALIGNMENT 30 YS2-6a09.q1k vc_1 402 367 2473 2508 C 36 94.44 1324 reject_low 10 ALIGNMENT 0 YS2-6a09.q1k vc_3 137 403 2532 2531 F 267 0.00 1324 reject_low 4 ALIGNMENT 117 YS2-6a09.q1k vc_4 722 404 5503 5811 C 319 82.13 1324 reject_low 7 ALIGNMENT 0 YS2-6a09.q1k vc_3 366 137 2509 2508 C 230 0.00 1324 reject_low 12 ALIGNMENT 0 YS2-6a09.q1k vc_4 137 403 127 126 F 267 0.00 1324 reject_low 8 ALIGNMENT 0 YS2-6a09.q1k vc_7 403 137 2727 2726 C 267 0.00 1324 reject_low 6 ALIGNMENT 0 YS2-6a09.q1k vc_5 366 137 5062 5061 C 230 0.00 1324 reject_low 13 ALIGNMENT 104 YS2-6a09.q1k vc_4 404 551 127 274 F 148 90.54 1324 reject_low 8 ALIGNMENT 30 YS2-6a09.q1k vc_2 402 367 2106 2141 C 36 94.44 1324 reject_low 11 ALIGNMENT 275 YS2-6a09.p1k chr04 352 70 868243 868525 C 283 99.65 370 accept_chi 0 ALIGNMENT 0 YS2-6a09.q1k vc_1 137 403 2532 2531 F 267 0.00 1324 reject_low 2 ALIGNMENT 250 YS2-6a09.q1k chr04 55 363 868256 868564 F 309 94.17 1324 accept_chi 1 ALIGNMENT 119 YS2-6a09.q1k vc_1 404 722 2532 2838 F 319 81.82 1324 reject_low 2 ALIGNMENT 0 YS2-6a09.q1k vc_4 403 137 5812 5811 C 267 0.00 1324 reject_low 7 ALIGNMENT 119 YS2-6a09.q1k vc_5 404 722 2399 2705 F 319 81.82 1324 reject_low 5 ALIGNMENT 0 YS2-6a09.q1k vc_5 137 403 2399 2398 F 267 0.00 1324 reject_low 5 ALIGNMENT 30 YS2-6a09.q1k vc_5 402 367 5026 5061 C 36 94.44 1324 reject_low 13 ALIGNMENT 0 YS2-6a09.q1k vc_1 366 137 2509 2508 C 230 0.00 1324 reject_low 10 ALIGNMENT 0 YS2-6a09.q1k vc_4 137 366 5835 5834 F 230 0.00 1324 reject_low 9 ALIGNMENT 104 YS2-6a09.q1k vc_4 404 551 6354 6501 F 148 90.54 1324 reject_low 9 ALIGNMENT 119 YS2-6a09.q1k vc_3 404 722 2532 2838 F 319 81.82 1324 reject_low 4 ALIGNMENT 30 YS2-6a09.q1k vc_3 402 367 2473 2508 C 36 94.44 1324 reject_low 12 ALIGNMENT 0 YS2-6a09.q1k vc_2 366 137 2142 2141 C 230 0.00 1324 reject_low 11 ALIGNMENT 0 YS2-6a09.p1k chr04 370 353 868244 868243 C 18 0.00 370 accept_chi 0 ALIGNMENT 0 YS2-6a09.q1k vc_4 403 137 1534 1533 C 267 0.00 1324 reject_low 14 ALIGNMENT 875 YS2-6a10.p1k chr02 74 1120 58379 59442 F 1047 96.18 1276 accept 0 ALIGNMENT 710 YS2-6a11.p1k chrm 1141 79 48104 49175 C 1063 96.71 1312 accept 0 ALIGNMENT 494 YS2-6a13.q1k chr10 707 26 373200 373877 C 682 92.38 1339 accept 0 ALIGNMENT 0 YS2-6a15.p1k chr04 912 770 787625 787624 C 143 0.00 1348 reject_low 1 ALIGNMENT 634 YS2-6a15.q1k chr07 28 853 437371 438190 F 826 93.46 1252 accept 0 ALIGNMENT 340 YS2-6a15.q1k chr07 126 597 787314 787785 F 472 91.31 1252 reject_low 2 ALIGNMENT 652 YS2-6a15.p1k chr04 769 74 787624 788319 C 696 99.71 1348 reject_low 1 ALIGNMENT 0 YS2-6a15.q1k chr07 92 125 787314 787313 F 34 0.00 1252 reject_low 2 ALIGNMENT 0 YS2-6a15.p1k chr07 765 92 442139 442138 C 674 0.00 1348 accept 0 ALIGNMENT 351 YS2-6a15.p1k chr07 1254 766 441638 442138 C 489 91.82 1348 accept 0 ALIGNMENT 734 YS2-6a17.q1k chr13 28 935 139028 139931 F 908 94.60 1268 accept 0 ALIGNMENT 996 YS2-6a17.p1k chr13 1220 33 143785 144989 C 1188 96.30 1313 accept 0 ALIGNMENT 979 YS2-6a18.p1k chr13 1297 70 143719 144950 C 1228 95.11 1372 accept 0 ALIGNMENT 153 YS2-6a18.q1k chr13 124 610 139080 139535 F 487 82.55 1528 accept 0 ALIGNMENT 58 YS2-6a19.p1k chr02 558 726 91649 91817 F 169 79.29 1279 reject_low 1 ALIGNMENT 0 YS2-6a19.p1k chr02 92 394 91486 91485 F 303 0.00 1279 reject_low 1 ALIGNMENT 0 YS2-6a19.p1k chr02 727 855 91817 91816 F 129 0.00 1279 reject_low 1 ALIGNMENT 955 YS2-6a19.p1k chr05 1214 73 360214 361362 C 1142 95.88 1279 accept 0 ALIGNMENT 27 YS2-6a19.p1k chr02 395 454 91486 91545 F 60 83.33 1279 reject_low 1 ALIGNMENT 0 YS2-6a19.p1k chr02 455 557 91546 91648 F 103 0.00 1279 reject_low 1 ALIGNMENT 668 YS2-6a19.q1k chr05 32 946 356669 357571 F 915 93.11 1327 accept 0 ALIGNMENT 0 YS2-6a20.q1k chr13 92 179 363057 363056 F 88 0.00 1290 reject_low 12 ALIGNMENT 0 YS2-6a20.q1k chr16 170 520 856881 856880 F 351 0.00 1290 reject_low 11 ALIGNMENT 65 YS2-6a20.q1k chr07 186 262 319784 319860 F 77 94.81 1290 reject_low 19 ALIGNMENT 0 YS2-6a20.q1k chr07 263 520 319860 319859 F 258 0.00 1290 reject_low 19 ALIGNMENT 0 YS2-6a20.q1k chr05 520 259 434537 434536 C 262 0.00 1290 reject_low 1 ALIGNMENT 0 YS2-6a20.q1k chr02 170 520 198057 198056 F 351 0.00 1290 reject_low 3 ALIGNMENT 518 YS2-6a20.q1k chr05 173 920 207343 208087 F 748 91.18 1290 accept 0 ALIGNMENT 0 YS2-6a20.q1k chr08 92 185 62753 62752 F 94 0.00 1290 reject_low 20 ALIGNMENT 0 YS2-6a20.q1k chr07 185 92 110701 110700 C 94 0.00 1290 reject_low 21 ALIGNMENT 94 YS2-6a20.q1k chr14 25 169 726435 726575 F 145 91.03 1290 reject_low 10 ALIGNMENT 144 YS2-6a20.q1k chr05 258 25 434536 434767 C 234 89.32 1290 reject_low 1 ALIGNMENT 88 YS2-6a20.q1k chr16 25 169 880582 880722 F 145 89.66 1290 reject_low 18 ALIGNMENT 97 YS2-6a20.q1k chr14 25 169 546938 547078 F 145 91.72 1290 reject_low 4 ALIGNMENT 0 YS2-6a20.q1k chr08 259 520 62825 62824 F 262 0.00 1290 reject_low 20 ALIGNMENT 88 YS2-6a20.q1k chr08 173 25 85380 85526 C 149 89.26 1290 reject_low 15 ALIGNMENT 94 YS2-6a20.q1k chr16 25 169 856741 856881 F 145 91.03 1290 reject_low 11 ALIGNMENT 94 YS2-6a20.q1k chr05 169 25 492434 492574 C 145 91.03 1290 reject_low 6 ALIGNMENT 0 YS2-6a20.q1k chr05 520 170 492435 492434 C 351 0.00 1290 reject_low 6 ALIGNMENT 64 YS2-6a20.q1k chr08 186 258 62753 62825 F 73 95.89 1290 reject_low 20 ALIGNMENT 0 YS2-6a20.q1k chr07 520 258 110630 110629 C 263 0.00 1290 reject_low 21 ALIGNMENT 0 YS2-6a20.q1k chr09 170 520 205556 205555 F 351 0.00 1290 reject_low 7 ALIGNMENT 0 YS2-6a20.q1k chr05 92 172 207343 207342 F 81 0.00 1290 accept 0 ALIGNMENT 68 YS2-6a20.q1k chr11 270 182 313034 313121 C 89 93.26 1290 reject_low 13 ALIGNMENT 0 YS2-6a20.q1k chr07 92 185 319784 319783 F 94 0.00 1290 reject_low 19 ALIGNMENT 94 YS2-6a20.q1k chr09 25 169 205416 205556 F 145 91.03 1290 reject_low 7 ALIGNMENT 94 YS2-6a20.q1k chr04 25 169 668291 668431 F 145 91.03 1290 reject_low 5 ALIGNMENT 97 YS2-6a20.q1k chr02 25 169 197917 198057 F 145 91.72 1290 reject_low 3 ALIGNMENT 0 YS2-6a20.q1k chr09 170 520 210644 210643 F 351 0.00 1290 reject_low 8 ALIGNMENT 0 YS2-6a20.q1k chr05 520 173 249927 249926 C 348 0.00 1290 reject_low 2 ALIGNMENT 0 YS2-6a20.q1k chr08 520 174 85381 85380 C 347 0.00 1290 reject_low 15 ALIGNMENT 0 YS2-6a20.q1k chr15 170 520 854612 854611 F 351 0.00 1290 reject_low 14 ALIGNMENT 0 YS2-6a20.q1k chr14 170 520 726575 726574 F 351 0.00 1290 reject_low 10 ALIGNMENT 950 YS2-6a20.p1k chr05 1121 34 210149 211247 C 1088 96.69 1260 accept 0 ALIGNMENT 0 YS2-6a20.q1k chr04 520 170 945950 945949 C 351 0.00 1290 reject_low 16 ALIGNMENT 0 YS2-6a20.q1k chr07 170 520 736327 736326 F 351 0.00 1290 reject_low 17 ALIGNMENT 0 YS2-6a20.q1k chr11 520 271 313035 313034 C 250 0.00 1290 reject_low 13 ALIGNMENT 91 YS2-6a20.q1k chr07 25 169 736187 736327 F 145 90.34 1290 reject_low 17 ALIGNMENT 0 YS2-6a20.q1k chr04 170 520 668431 668430 F 351 0.00 1290 reject_low 5 ALIGNMENT 63 YS2-6a20.q1k chr07 257 186 110629 110700 C 72 95.83 1290 reject_low 21 ALIGNMENT 67 YS2-6a20.q1k chr13 180 270 363057 363146 F 91 92.31 1290 reject_low 12 ALIGNMENT 94 YS2-6a20.q1k chr09 25 169 210504 210644 F 145 91.03 1290 reject_low 8 ALIGNMENT 0 YS2-6a20.q1k chr16 170 520 880722 880721 F 351 0.00 1290 reject_low 18 ALIGNMENT 97 YS2-6a20.q1k chr05 172 25 249926 250069 C 148 91.22 1290 reject_low 2 ALIGNMENT 91 YS2-6a20.q1k chr04 169 25 945949 946089 C 145 90.34 1290 reject_low 16 ALIGNMENT 0 YS2-6a20.q1k chr11 181 92 313122 313121 C 90 0.00 1290 reject_low 13 ALIGNMENT 0 YS2-6a20.q1k chr11 520 170 202291 202290 C 351 0.00 1290 reject_low 9 ALIGNMENT 0 YS2-6a20.q1k chr14 170 520 547078 547077 F 351 0.00 1290 reject_low 4 ALIGNMENT 92 YS2-6a20.q1k chr15 25 169 854473 854612 F 145 91.03 1290 reject_low 14 ALIGNMENT 94 YS2-6a20.q1k chr11 169 25 202290 202430 C 145 91.03 1290 reject_low 9 ALIGNMENT 0 YS2-6a20.q1k chr13 271 520 363146 363145 F 250 0.00 1290 reject_low 12 ALIGNMENT 494 YS2-6a21.p1k chr15 584 80 637011 637515 C 505 99.80 602 accept_chi 0 ALIGNMENT 387 YS2-6a21.q1k chr15 137 625 637070 637554 F 489 94.07 1355 accept_chi 1 ALIGNMENT 0 YS2-6a21.p1k chr15 602 585 637012 637011 C 18 0.00 602 accept_chi 0 ALIGNMENT 0 YS2-6a22.p1k chr15 598 581 637012 637011 C 18 0.00 598 accept_chi 0 ALIGNMENT 355 YS2-6a22.q1k chr15 45 533 637011 637493 F 489 92.02 1723 accept_chi 1 ALIGNMENT 473 YS2-6a22.p1k chr15 580 75 637011 637515 C 506 98.22 598 accept_chi 0 ALIGNMENT 477 YS2-6a23.p1k chr12 608 44 822369 822932 C 565 95.75 1361 accept 0 ALIGNMENT 444 YS2-6a23.q1k chr12 64 680 817594 818205 F 617 92.54 1275 accept 0 ALIGNMENT 26 YS2-6a23.q1k chr07 665 555 735761 735868 C 111 78.38 1275 reject_low 2 ALIGNMENT 0 YS2-6a23.q1k chr03 555 188 151839 151838 C 368 0.00 1275 reject_low 1 ALIGNMENT 47 YS2-6a23.q1k chr03 680 556 151716 151838 C 125 81.60 1275 reject_low 1 ALIGNMENT 0 YS2-6a23.q1k chr07 554 188 735869 735868 C 367 0.00 1275 reject_low 2 ALIGNMENT 910 YS2-6b02.p1k chr16 34 1123 857087 858198 F 1090 95.87 1289 accept 0 ALIGNMENT 404 YS2-6b03.q1k chr10 40 838 51955 52740 F 799 86.61 1349 accept 0 ALIGNMENT 903 YS2-6b03.p1k chr10 1128 78 55721 56783 C 1051 96.96 1308 accept 0 ALIGNMENT 0 YS2-6b04.p1k chr03 77 930 84808 84807 F 854 0.00 1347 reject_low 6 ALIGNMENT 104 YS2-6b04.p1k chr14 933 1128 524730 524928 F 196 87.24 1347 reject_low 41 ALIGNMENT 102 YS2-6b04.q1k chr04 52 460 989861 990269 F 409 75.31 1384 reject_low 17 ALIGNMENT 108 YS2-6b04.p1k chr15 1223 933 704093 704396 C 291 82.13 1347 reject_low 29 ALIGNMENT 0 YS2-6b04.p1k chr14 77 932 519164 519163 F 856 0.00 1347 reject_low 40 ALIGNMENT 0 YS2-6b04.p1k chr03 77 932 84068 84067 F 856 0.00 1347 reject_low 39 ALIGNMENT 106 YS2-6b04.p1k chr02 933 1164 29641 29878 F 232 84.48 1347 reject_low 5 ALIGNMENT 112 YS2-6b04.p1k chr13 933 1164 768547 768784 F 232 85.34 1347 reject_low 34 ALIGNMENT 0 YS2-6b04.p1k chr14 932 77 726947 726946 C 856 0.00 1347 reject_low 35 ALIGNMENT 502 YS2-6b04.q1k chr07 774 46 813494 814219 C 729 90.40 1384 reject_low 2 ALIGNMENT 112 YS2-6b04.p1k chr12 1164 933 976348 976585 C 232 85.34 1347 reject_low 33 ALIGNMENT 0 YS2-6b04.p1k chr01 931 77 166165 166164 C 855 0.00 1347 reject_low 42 ALIGNMENT 0 YS2-6b04.p1k chr06 77 932 143535 143534 F 856 0.00 1347 reject_low 32 ALIGNMENT 0 YS2-6b04.p1k chr01 77 931 189419 189418 F 855 0.00 1347 reject_low 45 ALIGNMENT 114 YS2-6b04.p1k chr06 933 1223 137908 138210 F 291 82.47 1347 reject_low 1 ALIGNMENT 114 YS2-6b04.p1k chr07 933 1223 811452 811754 F 291 82.47 1347 reject_low 2 ALIGNMENT 102 YS2-6b04.q1k chr10 460 52 480332 480740 C 409 75.31 1384 reject_low 19 ALIGNMENT 113 YS2-6b04.p1k chr12 1164 932 981459 981697 C 233 85.41 1347 reject_low 4 ALIGNMENT 106 YS2-6b04.p1k chr03 933 1151 84068 84290 F 219 85.39 1347 reject_low 39 ALIGNMENT 114 YS2-6b04.p1k chr15 931 1164 970280 970519 F 234 85.47 1347 reject_low 3 ALIGNMENT 102 YS2-6b04.q1k chr12 52 460 479120 479528 F 409 75.31 1384 reject_low 20 ALIGNMENT 485 YS2-6b04.q1k chr02 769 46 31688 32408 C 724 89.78 1384 reject_low 5 ALIGNMENT 0 YS2-6b04.p1k chr01 932 77 160576 160575 C 856 0.00 1347 reject_low 44 ALIGNMENT 112 YS2-6b04.p1k chr15 933 1164 975909 976146 F 232 85.34 1347 reject_low 36 ALIGNMENT 0 YS2-6b04.p1k chr02 77 932 35268 35267 F 856 0.00 1347 reject_low 37 ALIGNMENT 0 YS2-6b04.p1k chr15 77 930 970280 970279 F 854 0.00 1347 reject_low 3 ALIGNMENT 0 YS2-6b04.p1k chr06 77 932 137908 137907 F 856 0.00 1347 reject_low 1 ALIGNMENT 117 YS2-6b04.p1k chr15 933 1223 664814 665117 F 291 83.16 1347 reject_low 23 ALIGNMENT 101 YS2-6b04.p1k chr03 932 1103 82698 82870 F 172 88.37 1347 reject_low 43 ALIGNMENT 102 YS2-6b04.q1k chr05 52 460 446538 446946 F 409 75.31 1384 reject_low 18 ALIGNMENT 101 YS2-6b04.p1k chr01 1103 932 165992 166164 C 172 88.37 1347 reject_low 42 ALIGNMENT 112 YS2-6b04.p1k chr06 933 1164 143535 143772 F 232 85.34 1347 reject_low 32 ALIGNMENT 0 YS2-6b04.p1k chr01 77 929 183133 183132 F 853 0.00 1347 reject_low 46 ALIGNMENT 0 YS2-6b04.p1k chr05 924 77 431826 431825 C 848 0.00 1347 reject_low 15 ALIGNMENT 0 YS2-6b04.p1k chr15 931 77 710026 710025 C 855 0.00 1347 reject_low 8 ALIGNMENT 0 YS2-6b04.p1k chr15 932 77 704397 704396 C 856 0.00 1347 reject_low 29 ALIGNMENT 0 YS2-6b04.p1k chr02 77 932 29641 29640 F 856 0.00 1347 reject_low 5 ALIGNMENT 846 YS2-6b04.p1k chr16 932 64 525664 526532 C 869 99.42 1347 accept 0 ALIGNMENT 104 YS2-6b04.p1k chr14 933 1128 519164 519362 F 196 87.24 1347 reject_low 40 ALIGNMENT 102 YS2-6b04.q1k chr04 52 460 881440 881848 F 409 75.31 1384 reject_low 16 ALIGNMENT 0 YS2-6b04.p1k chr03 77 931 82698 82697 F 855 0.00 1347 reject_low 43 ALIGNMENT 111 YS2-6b04.p1k chr03 933 1223 84294 84596 F 291 82.13 1347 reject_low 28 ALIGNMENT 115 YS2-6b04.p1k chr05 1223 925 431515 431825 C 299 82.61 1347 reject_low 15 ALIGNMENT 0 YS2-6b04.p1k chr14 77 932 524730 524729 F 856 0.00 1347 reject_low 41 ALIGNMENT 30 YS2-6b04.p1k chr01 930 1001 183133 183205 F 72 83.33 1347 reject_low 46 ALIGNMENT 498 YS2-6b04.q1k chr07 46 774 571936 572662 F 729 90.26 1384 reject_low 7 ALIGNMENT 491 YS2-6b04.q1k chr12 46 769 978929 979649 F 724 90.06 1384 reject_low 4 ALIGNMENT 109 YS2-6b04.p1k chr16 933 1164 62389 62626 F 232 84.91 1347 reject_low 38 ALIGNMENT 113 YS2-6b04.p1k chr08 1223 933 91792 92095 C 291 82.47 1347 reject_low 25 ALIGNMENT 0 YS2-6b04.p1k chr13 77 932 768547 768546 F 856 0.00 1347 reject_low 34 ALIGNMENT 110 YS2-6b04.p1k chr15 1223 932 709721 710025 C 292 82.19 1347 reject_low 8 ALIGNMENT 0 YS2-6b04.p1k chr15 77 932 975909 975908 F 856 0.00 1347 reject_low 36 ALIGNMENT 102 YS2-6b04.q1k chr13 460 52 186535 186943 C 409 75.31 1384 reject_low 21 ALIGNMENT 0 YS2-6b04.p1k chr07 77 932 811452 811451 F 856 0.00 1347 reject_low 2 ALIGNMENT 100 YS2-6b04.p1k chr01 1103 933 160404 160575 C 171 88.30 1347 reject_low 44 ALIGNMENT 112 YS2-6b04.p1k chr14 1164 933 726709 726946 C 232 85.34 1347 reject_low 35 ALIGNMENT 115 YS2-6b04.p1k chr09 932 1223 246216 246520 F 292 82.88 1347 reject_low 24 ALIGNMENT 113 YS2-6b04.p1k chr13 1223 933 168378 168681 C 291 82.82 1347 reject_low 26 ALIGNMENT 0 YS2-6b04.p1k chr08 932 77 92096 92095 C 856 0.00 1347 reject_low 25 ALIGNMENT 112 YS2-6b04.p1k chr03 933 1164 90437 90674 F 232 85.34 1347 reject_low 31 ALIGNMENT 128 YS2-6b04.q1k chr07 52 632 564989 565568 F 581 74.53 1384 reject_low 14 ALIGNMENT 475 YS2-6b04.q1k chr14 46 689 565225 565867 F 644 91.77 1384 reject_low 12 ALIGNMENT 0 YS2-6b04.p1k chr15 77 932 664814 664813 F 856 0.00 1347 reject_low 23 ALIGNMENT 86 YS2-6b04.p1k chr01 932 1164 189419 189657 F 233 81.55 1347 reject_low 45 ALIGNMENT 0 YS2-6b04.p1k chr16 77 932 62389 62388 F 856 0.00 1347 reject_low 38 ALIGNMENT 0 YS2-6b04.p1k chr09 77 931 246216 246215 F 855 0.00 1347 reject_low 24 ALIGNMENT 487 YS2-6b04.q1k chr04 774 46 983207 983932 C 729 89.71 1384 reject_low 9 ALIGNMENT 502 YS2-6b04.q1k chr06 774 46 139950 140675 C 729 90.40 1384 reject_low 1 ALIGNMENT 0 YS2-6b04.p1k chr12 932 77 976586 976585 C 856 0.00 1347 reject_low 33 ALIGNMENT 0 YS2-6b04.p1k chr02 77 932 9093 9092 F 856 0.00 1347 reject_low 30 ALIGNMENT 112 YS2-6b04.p1k chr02 933 1164 9093 9330 F 232 85.34 1347 reject_low 30 ALIGNMENT 116 YS2-6b04.p1k chr03 931 1223 84808 85112 F 293 82.59 1347 reject_low 6 ALIGNMENT 0 YS2-6b04.p1k chr13 932 77 168682 168681 C 856 0.00 1347 reject_low 26 ALIGNMENT 0 YS2-6b04.p1k chr12 931 77 981698 981697 C 855 0.00 1347 reject_low 4 ALIGNMENT 96 YS2-6b04.q1k chr07 460 52 538135 538543 C 409 74.82 1384 reject_low 27 ALIGNMENT 0 YS2-6b04.p1k chr03 77 932 90437 90436 F 856 0.00 1347 reject_low 31 ALIGNMENT 493 YS2-6b04.q1k chr15 774 46 972324 973049 C 729 89.99 1384 reject_low 3 ALIGNMENT 475 YS2-6b04.q1k chr03 689 46 86935 87577 C 644 91.77 1384 reject_low 6 ALIGNMENT 109 YS2-6b04.p1k chr02 933 1164 35268 35505 F 232 84.91 1347 reject_low 37 ALIGNMENT 478 YS2-6b04.q1k chr04 46 689 516876 517518 F 644 91.93 1384 reject_low 10 ALIGNMENT 468 YS2-6b04.q1k chr04 688 46 873942 874583 C 643 91.45 1384 reject_low 13 ALIGNMENT 478 YS2-6b04.q1k chr12 689 46 943314 943956 C 644 91.93 1384 reject_low 11 ALIGNMENT 472 YS2-6b04.q1k chr15 46 689 707256 707898 F 644 91.61 1384 reject_low 8 ALIGNMENT 102 YS2-6b04.q1k chr15 460 52 597186 597594 C 409 75.31 1384 reject_low 22 ALIGNMENT 0 YS2-6b04.p1k chr03 77 932 84294 84293 F 856 0.00 1347 reject_low 28 ALIGNMENT 0 YS2-6b05.q1k vc_4 237 62 113 112 C 176 0.00 897 reject_low 8 ALIGNMENT 307 YS2-6b05.q1k vc_4 420 1 5233 5654 C 420 91.43 897 reject_low 2 ALIGNMENT 80 YS2-6b05.q1k vc_4 310 523 1882 2092 F 214 80.84 897 reject_low 7 ALIGNMENT 38 YS2-6b05.q1k vc_4 303 238 46 112 C 66 86.36 897 reject_low 8 ALIGNMENT 38 YS2-6b05.q1k vc_4 238 303 1548 1614 F 66 86.36 897 reject_low 7 ALIGNMENT 254 YS2-6b05.q1k vc_3 1 302 2689 2991 F 302 95.03 897 reject_low 5 ALIGNMENT 254 YS2-6b05.q1k vc_1 1 302 2689 2991 F 302 95.03 897 reject_low 3 ALIGNMENT 200 YS2-6b05.q1k vc_7 302 53 4922 5172 C 250 93.60 897|0,1 reject_low 6 ALIGNMENT 0 YS2-6b05.q1k vc_7 53 54 5172 6360 C 0 0.00 897 reject_low 6 ALIGNMENT 51 YS2-6b05.q1k vc_7 54 3 6360 6411 C 52 100.00 897|1,0 reject_low 6 ALIGNMENT 38 YS2-6b05.q1k vc_4 303 238 6273 6339 C 66 86.36 897 reject_low 9 ALIGNMENT 0 YS2-6b05.q1k vc_4 304 309 1615 1881 F 6 0.00 897 reject_low 7 ALIGNMENT 0 YS2-6b05.q1k vc_4 237 62 6340 6339 C 176 0.00 897 reject_low 9 ALIGNMENT 0 YS2-6b05.q1k vc_4 62 237 1548 1547 F 176 0.00 897 reject_low 7 ALIGNMENT 340 YS2-6b05.q1k vc_7 523 1 2049 2569 C 523 88.91 897 reject_vc 1 ALIGNMENT 340 YS2-6b05.q1k vc_5 1 523 2556 3076 F 523 88.91 897 reject_vc 0 ALIGNMENT 254 YS2-6b05.q1k vc_2 1 302 2322 2624 F 302 95.03 897 reject_low 4 ALIGNMENT 38 YS2-6b07.q1k vc_3 191 150 2472 2513 C 42 97.62 1339 reject_low 13 ALIGNMENT 403 YS2-6b07.q1k vc_5 191 737 2398 2943 F 547 91.96 1339 reject_low 1 ALIGNMENT 33 YS2-6b07.q1k vc_5 188 153 1 36 C 36 97.22 1339 reject_low 16 ALIGNMENT 38 YS2-6b07.q1k vc_4 150 191 5830 5871 F 42 97.62 1339 reject_low 8 ALIGNMENT 0 YS2-6b07.q1k vc_3 174 190 2531 2530 F 17 0.00 1339 reject_low 6 ALIGNMENT 0 YS2-6b07.q1k vc_4 192 191 5872 6353 F 0 0.00 1339 reject_low 8 ALIGNMENT 154 YS2-6b07.q1k vc_4 191 352 126 287 F 162 98.77 1339 reject_low 9 ALIGNMENT 0 YS2-6b07.q1k vc_7 192 369 13562 13561 F 178 0.00 1339 reject_low 15 ALIGNMENT 0 YS2-6b07.q1k vc_1 174 190 2531 2530 F 17 0.00 1339 reject_low 4 ALIGNMENT 0 YS2-6b07.q1k vc_2 174 190 2164 2163 F 17 0.00 1339 reject_low 5 ALIGNMENT 0 YS2-6b07.q1k vc_4 190 174 5813 5812 C 17 0.00 1339 reject_low 2 ALIGNMENT 374 YS2-6b07.q1k vc_3 191 623 2531 2963 F 433 95.84 1339 reject_low 6 ALIGNMENT 399 YS2-6b07.q1k vc_7 716 191 2202 2727 C 526 92.59 1339 reject_low 3 ALIGNMENT 0 YS2-6b07.q1k vc_4 190 174 1535 1534 C 17 0.00 1339 reject_low 10 ALIGNMENT 374 YS2-6b07.q1k vc_2 191 623 2164 2596 F 433 95.84 1339 reject_low 5 ALIGNMENT 0 YS2-6b07.q1k vc_5 369 189 2 1 C 181 0.00 1339 reject_low 16 ALIGNMENT 87 YS2-6b07.q1k vc_4 279 191 1446 1534 C 89 100.00 1339 reject_low 10 ALIGNMENT 0 YS2-6b07.q1k vc_4 174 190 126 125 F 17 0.00 1339 reject_low 9 ALIGNMENT 0 YS2-6b07.q1k vc_7 400 174 5173 5172 C 227 0.00 1339 reject_low 7 ALIGNMENT 116 YS2-6b07.q1k chr12 4 150 723199 723343 F 147 94.56 1339 accept 0 ALIGNMENT 175 YS2-6b07.q1k vc_7 623 401 4950 5172 C 223 93.27 1339 reject_low 7 ALIGNMENT 374 YS2-6b07.q1k vc_1 191 623 2531 2963 F 433 95.84 1339 reject_low 4 ALIGNMENT 31 YS2-6b07.q1k vc_4 666 737 1890 1959 F 72 83.33 1339 reject_low 9 ALIGNMENT 0 YS2-6b07.q1k vc_5 174 190 2398 2397 F 17 0.00 1339 reject_low 1 ALIGNMENT 38 YS2-6b07.q1k vc_1 191 150 2472 2513 C 42 97.62 1339 reject_low 11 ALIGNMENT 38 YS2-6b07.q1k vc_2 191 150 2105 2146 C 42 97.62 1339 reject_low 12 ALIGNMENT 0 YS2-6b07.q1k vc_4 353 665 288 1889 F 313 0.00 1339 reject_low 9 ALIGNMENT 0 YS2-6b07.q1k vc_5 369 192 5026 5025 C 178 0.00 1339 reject_low 14 ALIGNMENT 396 YS2-6b07.q1k vc_4 737 191 5265 5812 C 547 91.59 1339 reject_low 2 ALIGNMENT 0 YS2-6b07.q1k chr12 151 369 723343 723342 F 219 0.00 1339 accept 0 ALIGNMENT 154 YS2-6b07.q1k vc_4 191 352 6353 6514 F 162 98.77 1339|1,0 reject_low 8 ALIGNMENT 0 YS2-6b07.q1k vc_4 369 280 1447 1446 C 90 0.00 1339 reject_low 10 ALIGNMENT 0 YS2-6b07.q1k vc_1 369 192 2473 2472 C 178 0.00 1339 reject_low 11 ALIGNMENT 0 YS2-6b07.q1k vc_4 353 369 6514 6513 F 17 0.00 1339 reject_low 8 ALIGNMENT 0 YS2-6b07.q1k vc_7 665 624 4686 4949 C 42 0.00 1339 reject_low 7 ALIGNMENT 36 YS2-6b07.q1k vc_5 191 153 5025 5063 C 39 97.44 1339 reject_low 14 ALIGNMENT 31 YS2-6b07.q1k vc_7 737 666 4616 4685 C 72 83.33 1339 reject_low 7 ALIGNMENT 35 YS2-6b07.q1k vc_7 154 191 13525 13562 F 38 97.37 1339 reject_low 15 ALIGNMENT 0 YS2-6b07.q1k vc_7 190 174 2728 2727 C 17 0.00 1339 reject_low 3 ALIGNMENT 0 YS2-6b07.q1k vc_3 369 192 2473 2472 C 178 0.00 1339 reject_low 13 ALIGNMENT 0 YS2-6b07.q1k vc_2 369 192 2106 2105 C 178 0.00 1339 reject_low 12 ALIGNMENT 447 YS2-6b09.q1k chr09 646 53 166710 167299 C 594 92.26 1418 accept 0 ALIGNMENT 808 YS2-6b09.p1k chr09 77 1135 162443 163500 F 1059 93.67 1305 accept 0 ALIGNMENT 442 YS2-6b10.q1k chr04 40 644 1058487 1059087 F 605 92.23 1449 accept 0 ALIGNMENT 24 YS2-6b11.q1k vc_7 382 358 2532 2556 C 25 100.00 1420 reject_vc 2 ALIGNMENT 24 YS2-6b11.q1k vc_5 358 382 2569 2593 F 25 100.00 1420 reject_vc 1 ALIGNMENT 24 YS2-6b11.q1k vc_4 382 358 5617 5641 C 25 100.00 1420 reject_vc 0 ALIGNMENT 124 YS2-6b12.p1k chrm 67 219 25602 25754 F 153 98.04 238 accept 0 ALIGNMENT 0 YS2-6b12.p1k chrm 220 238 25754 25753 F 19 0.00 238 accept 0 ALIGNMENT 872 YS2-6b14.p1k chr06 1248 34 3432 4620 C 1215 92.76 1330 reject_low 11 ALIGNMENT 0 YS2-6b14.q1k chr15 552 62 1089403 1089402 C 491 0.00 1246 reject_low 99 ALIGNMENT 43 YS2-6b14.q1k chr02 602 662 1497 1557 F 61 91.80 1246 reject_low 56 ALIGNMENT 0 YS2-6b14.q1k chr02 62 553 1630 1629 F 492 0.00 1246 reject_low 76 ALIGNMENT 0 YS2-6b14.q1k chr09 62 553 1794 1793 F 492 0.00 1246 reject_low 54 ALIGNMENT 563 YS2-6b14.q1k chr06 1 690 341 1027 F 690 94.49 1246 reject_low 11 ALIGNMENT 47 YS2-6b14.q1k chr16 710 554 946232 946386 C 157 78.98 1246 reject_low 45 ALIGNMENT 0 YS2-6b14.q1k chr08 62 553 1687 1686 F 492 0.00 1246 reject_low 32 ALIGNMENT 0 YS2-6b14.q1k chr12 62 564 7553 7552 F 503 0.00 1246 reject_low 130 ALIGNMENT 37 YS2-6b14.q1k chr10 554 662 2101 2208 F 109 80.73 1246 reject_low 87 ALIGNMENT 606 YS2-6b14.q1k chr02 1 710 934 1640 F 710 95.77 1246 reject_low 10 ALIGNMENT 621 YS2-6b14.q1k chr04 710 1 1530334 1531040 C 710 96.48 1246 ambiguous_tel 3 ALIGNMENT 880 YS2-6b14.p1k chr10 1248 34 5716 6916 C 1215 92.76 1330 reject_low 13 ALIGNMENT 35 YS2-6b14.q1k chr06 565 654 940 1028 F 90 82.22 1246 reject_low 113 ALIGNMENT 31 YS2-6b14.q1k chr12 557 654 1902 1998 F 98 79.59 1246 reject_low 118 ALIGNMENT 0 YS2-6b14.q1k chr13 62 564 1894 1893 F 503 0.00 1246 reject_low 111 ALIGNMENT 43 YS2-6b14.q1k chr13 602 662 1678 1738 F 61 91.80 1246 reject_low 62 ALIGNMENT 0 YS2-6b14.q1k chr15 564 62 1089319 1089318 C 503 0.00 1246 reject_low 128 ALIGNMENT 0 YS2-6b14.q1k chr10 62 548 1880 1879 F 487 0.00 1246 reject_low 66 ALIGNMENT 573 YS2-6b14.q1k chr05 1 662 918 1577 F 662 96.07 1246 reject_low 17 ALIGNMENT 0 YS2-6b14.q1k chr02 62 553 1522 1521 F 492 0.00 1246 reject_low 53 ALIGNMENT 0 YS2-6b14.q1k chr05 564 62 575091 575090 C 503 0.00 1246 reject_low 112 ALIGNMENT 45 YS2-6b14.q1k chr05 554 705 1506 1655 F 152 78.95 1246 reject_low 46 ALIGNMENT 35 YS2-6b14.q1k chr05 654 565 575002 575090 C 90 82.22 1246 reject_low 112 ALIGNMENT 0 YS2-6b14.q1k chr05 553 62 575282 575281 C 492 0.00 1246 reject_low 21 ALIGNMENT 38 YS2-6b14.q1k chr02 553 654 1845 1945 F 102 81.37 1246 reject_low 80 ALIGNMENT 37 YS2-6b14.q1k chr12 554 662 2079 2186 F 109 80.73 1246 reject_low 89 ALIGNMENT 0 YS2-6b14.q1k chr09 62 553 1830 1829 F 492 0.00 1246 reject_low 125 ALIGNMENT 40 YS2-6b14.q1k chr08 554 654 1687 1786 F 101 82.18 1246 reject_low 32 ALIGNMENT 52 YS2-6b14.q1k chr10 554 662 1741 1848 F 109 85.32 1246 reject_low 50 ALIGNMENT 0 YS2-6b14.q1k chr16 553 62 946459 946458 C 492 0.00 1246 reject_low 108 ALIGNMENT 29 YS2-6b14.q1k chr12 565 645 2126 2205 F 81 81.48 1246 reject_low 123 ALIGNMENT 597 YS2-6b14.q1k chr12 1 755 1131 1879 F 755 93.91 1246 ambiguous_tel 0 ALIGNMENT 0 YS2-6b14.q1k chr12 564 62 1076355 1076354 C 503 0.00 1246 reject_low 127 ALIGNMENT 0 YS2-6b14.q1k chr02 62 564 2361 2360 F 503 0.00 1246 reject_low 138 ALIGNMENT 0 YS2-6b14.q1k chr12 564 62 1076463 1076462 C 503 0.00 1246 reject_low 114 ALIGNMENT 29 YS2-6b14.q1k chr06 554 642 1001 1088 F 89 80.90 1246 reject_low 121 ALIGNMENT 54 YS2-6b14.q1k chr05 602 705 1481 1583 F 104 85.58 1246 reject_low 38 ALIGNMENT 0 YS2-6b14.q1k chr16 62 553 1519 1518 F 492 0.00 1246 reject_low 30 ALIGNMENT 0 YS2-6b14.q1k chr16 553 62 946279 946278 C 492 0.00 1246 reject_low 119 ALIGNMENT 37 YS2-6b14.q1k chr05 662 554 575030 575137 C 109 80.73 1246 reject_low 86 ALIGNMENT 954 YS2-6b14.p1k chr07 34 1248 1084415 1085624 F 1215 94.32 1330 ambiguous_tel 7 ALIGNMENT 35 YS2-6b14.q1k chr12 654 553 1076338 1076438 C 102 80.39 1246 reject_low 98 ALIGNMENT 0 YS2-6b14.q1k chr16 62 553 1663 1662 F 492 0.00 1246 reject_low 95 ALIGNMENT 45 YS2-6b14.q1k chr16 654 554 946323 946422 C 101 84.16 1246 reject_low 70 ALIGNMENT 43 YS2-6b14.q1k chr14 602 662 1585 1645 F 61 91.80 1246 reject_low 63 ALIGNMENT 0 YS2-6b14.q1k chr10 62 553 1705 1704 F 492 0.00 1246 reject_low 44 ALIGNMENT 0 YS2-6b14.q1k chr13 62 601 1678 1677 F 540 0.00 1246 reject_low 62 ALIGNMENT 0 YS2-6b14.q1k chr06 62 564 940 939 F 503 0.00 1246 reject_low 113 ALIGNMENT 0 YS2-6b14.q1k chr02 62 553 2170 2169 F 492 0.00 1246 reject_low 69 ALIGNMENT 37 YS2-6b14.q1k chr15 662 554 1089366 1089473 C 109 80.73 1246 reject_low 94 ALIGNMENT 0 YS2-6b14.q1k chr05 552 62 574959 574958 C 491 0.00 1246 reject_low 133 ALIGNMENT 28 YS2-6b14.q1k chr12 645 565 1076275 1076354 C 81 81.48 1246 reject_low 127 ALIGNMENT 38 YS2-6b14.q1k chr13 553 654 1918 2018 F 102 81.37 1246 reject_low 84 ALIGNMENT 46 YS2-6b14.q1k chr12 554 654 1755 1854 F 101 84.16 1246 reject_low 68 ALIGNMENT 0 YS2-6b14.q1k chr05 601 62 575307 575306 C 540 0.00 1246 reject_low 58 ALIGNMENT 0 YS2-6b14.q1k chr05 62 601 1481 1480 F 540 0.00 1246 reject_low 38 ALIGNMENT 0 YS2-6b14.p1k chr08 250 62 4997 4996 C 189 0.00 1330 reject_low 18,19,32,33,34,36 ALIGNMENT 0 YS2-6b14.q1k chr02 62 564 2217 2216 F 503 0.00 1246 reject_low 96 ALIGNMENT 30 YS2-6b14.q1k chr16 645 554 946188 946278 C 92 80.43 1246 reject_low 119 ALIGNMENT 0 YS2-6b14.q1k chr04 553 62 1530453 1530452 C 492 0.00 1246 reject_low 20 ALIGNMENT 0 YS2-6b14.q1k chr12 553 62 1076402 1076401 C 492 0.00 1246 reject_low 106 ALIGNMENT 37 YS2-6b14.q1k chr12 662 554 1076402 1076509 C 109 80.73 1246 reject_low 91 ALIGNMENT 37 YS2-6b14.q1k chr05 662 554 574922 575029 C 109 80.73 1246 reject_low 85 ALIGNMENT 22 YS2-6b14.q1k chr05 619 553 574893 574958 C 67 80.60 1246 reject_low 133 ALIGNMENT 0 YS2-6b14.q1k chr02 62 556 1597 1596 F 495 0.00 1246 reject_low 41 ALIGNMENT 35 YS2-6b14.q1k chr12 654 565 1076374 1076462 C 90 82.22 1246 reject_low 114 ALIGNMENT 67 YS2-6b14.q1k chr14 554 755 1610 1806 F 202 80.20 1246 reject_low 28 ALIGNMENT 0 YS2-6b14.p1k chr16 62 264 942804 942803 F 203 0.00 1330 reject_low 16 ALIGNMENT 0 YS2-6b14.q1k chr05 62 553 1722 1721 F 492 0.00 1246 reject_low 129 ALIGNMENT 0 YS2-6b14.q1k chr08 564 62 560615 560614 C 503 0.00 1246 reject_low 137 ALIGNMENT 0 YS2-6b14.q1k chr12 62 552 2150 2149 F 491 0.00 1246 reject_low 139 ALIGNMENT 0 YS2-6b14.q1k chr14 62 553 1754 1753 F 492 0.00 1246 reject_low 103 ALIGNMENT 0 YS2-6b14.q1k chr12 601 62 1076679 1076678 C 540 0.00 1246 reject_low 61 ALIGNMENT 67 YS2-6b14.q1k chr04 755 554 1530256 1530452 C 202 80.20 1246 reject_low 20 ALIGNMENT 621 YS2-6b14.q1k chr15 710 1 1089499 1090205 C 710 96.48 1246 ambiguous_tel 5 ALIGNMENT 35 YS2-6b14.q1k chr02 553 662 1881 1989 F 110 80.00 1246 reject_low 97 ALIGNMENT 43 YS2-6b14.q1k chr07 662 602 1089323 1089383 C 61 91.80 1246 reject_low 59 ALIGNMENT 1021 YS2-6b14.p1k chr04 34 1248 1525514 1526718 F 1215 95.97 1330 ambiguous_tel 3 ALIGNMENT 0 YS2-6b14.q1k chr08 553 62 560662 560661 C 492 0.00 1246 reject_low 77 ALIGNMENT 0 YS2-6b14.p1k chr08 835 276 4973 4972 C 560 0.00 1330 reject_low 19,32,33,34,36 ALIGNMENT 1021 YS2-6b14.p1k chr15 34 1248 1084679 1085883 F 1215 95.97 1330 ambiguous_tel 5 ALIGNMENT 0 YS2-6b14.q1k chr16 553 62 946423 946422 C 492 0.00 1246 reject_low 70 ALIGNMENT 33 YS2-6b14.q1k chr02 565 662 2073 2169 F 98 80.61 1246 reject_low 116 ALIGNMENT 621 YS2-6b14.q1k chr12 710 1 1069872 1070578 C 710 96.48 1246 reject_low 15 ALIGNMENT 954 YS2-6b14.p1k chr16 1248 34 5253 6462 C 1215 94.40 1330 ambiguous_tel 8 ALIGNMENT 954 YS2-6b14.p1k chr14 1248 34 5344 6553 C 1215 94.40 1330 ambiguous_tel 6 ALIGNMENT 51 YS2-6b14.q1k chr02 557 710 1597 1748 F 154 79.87 1246 reject_low 41 ALIGNMENT 37 YS2-6b14.q1k chr12 554 662 1971 2078 F 109 80.73 1246 reject_low 88 ALIGNMENT 43 YS2-6b14.q1k chr05 554 654 1686 1785 F 101 83.17 1246 reject_low 72 ALIGNMENT 37 YS2-6b14.q1k chr12 554 662 7506 7613 F 109 80.73 1246 reject_low 90 ALIGNMENT 0 YS2-6b14.q1k chr12 62 552 2042 2041 F 491 0.00 1246 reject_low 83 ALIGNMENT 0 YS2-6b14.q1k chr12 62 553 1719 1718 F 492 0.00 1246 reject_low 105 ALIGNMENT 0 YS2-6b14.q1k chr12 553 62 1069991 1069990 C 492 0.00 1246 reject_low 25 ALIGNMENT 0 YS2-6b14.q1k chr06 62 553 1001 1000 F 492 0.00 1246 reject_low 121 ALIGNMENT 43 YS2-6b14.q1k chr15 662 602 1089582 1089642 C 61 91.80 1246 reject_low 64 ALIGNMENT 38 YS2-6b14.q1k chr02 553 654 1953 2053 F 102 81.37 1246 reject_low 81 ALIGNMENT 67 YS2-6b14.q1k chr12 554 755 7362 7558 F 202 80.20 1246 reject_low 24 ALIGNMENT 0 YS2-6b14.q1k chr12 62 553 7506 7505 F 492 0.00 1246 reject_low 90 ALIGNMENT 0 YS2-6b14.q1k chr02 62 552 1881 1880 F 491 0.00 1246 reject_low 97 ALIGNMENT 67 YS2-6b14.q1k chr12 755 554 1076457 1076653 C 202 80.20 1246 reject_low 26 ALIGNMENT 0 YS2-6b14.q1k chr07 553 62 1089215 1089214 C 492 0.00 1246 reject_low 101 ALIGNMENT 0 YS2-6b14.q1k chr12 62 553 1791 1790 F 492 0.00 1246 reject_low 42 ALIGNMENT 43 YS2-6b14.q1k chr05 662 602 575246 575306 C 61 91.80 1246 reject_low 58 ALIGNMENT 67 YS2-6b14.q1k chr08 755 554 560609 560805 C 202 80.20 1246 reject_low 23 ALIGNMENT 0 YS2-6b14.q1k chr07 553 62 1089359 1089358 C 492 0.00 1246 reject_low 22 ALIGNMENT 0 YS2-6b14.q1k chr06 62 564 976 975 F 503 0.00 1246 reject_low 109 ALIGNMENT 64 YS2-6b14.q1k chr12 554 755 1827 2023 F 202 79.70 1246 reject_low 31 ALIGNMENT 52 YS2-6b14.q1k chr10 554 654 2029 2128 F 101 86.14 1246 reject_low 51 ALIGNMENT 22 YS2-6b14.q1k chr12 553 619 2150 2215 F 67 80.60 1246|0,9 reject_low 139 ALIGNMENT 47 YS2-6b14.q1k chr09 554 710 1722 1876 F 157 78.98 1246 reject_low 43 ALIGNMENT 621 YS2-6b14.q1k chr05 710 1 575163 575869 C 710 96.48 1246 reject_low 14 ALIGNMENT 868 YS2-6b14.p1k chr02 1248 34 4595 5782 C 1215 92.67 1330 reject_low 10 ALIGNMENT 1025 YS2-6b14.p1k chr12 1248 34 4394 5597 C 1215 96.13 1330 ambiguous_tel 0 ALIGNMENT 0 YS2-6b14.q1k chr10 62 564 2148 2147 F 503 0.00 1246 reject_low 122 ALIGNMENT 555 YS2-6b14.q1k chr10 1 710 1117 1823 F 710 93.38 1246 reject_low 13 ALIGNMENT 0 YS2-6b14.q1k chr04 553 62 1530309 1530308 C 492 0.00 1246 reject_low 100 ALIGNMENT 39 YS2-6b14.q1k chr10 549 654 1880 1984 F 106 81.13 1246 reject_low 66 ALIGNMENT 0 YS2-6b14.q1k chr15 601 62 1089643 1089642 C 540 0.00 1246 reject_low 64 ALIGNMENT 0 YS2-6b14.q1k chr10 62 553 1777 1776 F 492 0.00 1246 reject_low 55 ALIGNMENT 634 YS2-6b14.p1k chr08 1248 413 4126 4951 C 836 93.78 1330 reject_low 18 ALIGNMENT 0 YS2-6b14.q1k chr04 601 62 1530478 1530477 C 540 0.00 1246 reject_low 57 ALIGNMENT 47 YS2-6b14.q1k chr10 554 710 1705 1859 F 157 78.98 1246 reject_low 44 ALIGNMENT 25 YS2-6b14.q1k chr02 565 645 2325 2404 F 81 80.25 1246 reject_low 131 ALIGNMENT 0 YS2-6b14.q1k chr16 601 62 946484 946483 C 540 0.00 1246 reject_low 40 ALIGNMENT 1025 YS2-6b14.p1k chr12 1248 34 9929 11132 C 1215 96.13 1330 ambiguous_tel 2 ALIGNMENT 0 YS2-6b14.q1k chr13 62 552 2026 2025 F 491 0.00 1246 reject_low 134 ALIGNMENT 67 YS2-6b14.q1k chr07 755 554 1089162 1089358 C 202 80.20 1246 reject_low 22 ALIGNMENT 0 YS2-6b14.q1k chr12 553 62 1076510 1076509 C 492 0.00 1246 reject_low 91 ALIGNMENT 33 YS2-6b14.q1k chr10 565 690 2004 2127 F 126 77.78 1246 reject_low 71 ALIGNMENT 67 YS2-6b14.q1k chr13 554 755 1703 1899 F 202 80.20 1246 reject_low 27 ALIGNMENT 36 YS2-6b14.q1k chr12 565 654 2018 2106 F 90 82.22 1246 reject_low 110 ALIGNMENT 0 YS2-6b14.q1k chr13 62 553 1703 1702 F 492 0.00 1246 reject_low 27 ALIGNMENT 62 YS2-6b14.q1k chr16 710 554 946196 946350 C 157 82.17 1246 reject_low 37 ALIGNMENT 0 YS2-6b14.q1k chr12 611 610 2207 7345 F 0 0.00 1246 reject_low 139 ALIGNMENT 43 YS2-6b14.q1k chr16 602 662 1494 1554 F 61 91.80 1246 reject_low 65 ALIGNMENT 40 YS2-6b14.q1k chr02 554 654 1738 1837 F 101 82.18 1246 reject_low 78 ALIGNMENT 0 YS2-6b14.q1k chr05 62 553 1686 1685 F 492 0.00 1246 reject_low 72 ALIGNMENT 0 YS2-6b14.q1k chr13 62 552 1918 1917 F 491 0.00 1246 reject_low 84 ALIGNMENT 0 YS2-6b14.q1k chr02 62 601 1497 1496 F 540 0.00 1246 reject_low 56 ALIGNMENT 0 YS2-6b14.q1k chr02 62 564 2073 2072 F 503 0.00 1246 reject_low 116 ALIGNMENT 67 YS2-6b14.q1k chr15 755 554 1089421 1089617 C 202 80.20 1246 reject_low 29 ALIGNMENT 0 YS2-6b14.q1k chr02 62 553 2098 2097 F 492 0.00 1246 reject_low 75 ALIGNMENT 591 YS2-6b14.q1k chr16 755 1 946298 947046 C 755 93.64 1246 reject_low 16 ALIGNMENT 624 YS2-6b14.q1k chr08 710 1 560687 561393 C 710 96.62 1246 reject_low 9 ALIGNMENT 43 YS2-6b14.q1k chr02 554 662 2170 2277 F 109 82.57 1246 reject_low 69 ALIGNMENT 0 YS2-6b14.q1k chr14 62 553 1610 1609 F 492 0.00 1246 reject_low 28 ALIGNMENT 0 YS2-6b14.q1k chr12 553 62 1076654 1076653 C 492 0.00 1246 reject_low 26 ALIGNMENT 28 YS2-6b14.q1k chr02 554 662 1918 2025 F 109 77.98 1246 reject_low 120 ALIGNMENT 0 YS2-6b14.q1k chr12 552 62 1076331 1076330 C 491 0.00 1246 reject_low 140 ALIGNMENT 52 YS2-6b14.q1k chr09 554 662 1758 1865 F 109 85.32 1246 reject_low 49 ALIGNMENT 0 YS2-6b14.q1k chr12 62 553 2079 2078 F 492 0.00 1246 reject_low 89 ALIGNMENT 0 YS2-6b14.q1k chr10 62 553 1813 1812 F 492 0.00 1246 reject_low 73 ALIGNMENT 0 YS2-6b14.q1k chr16 553 62 946351 946350 C 492 0.00 1246 reject_low 37 ALIGNMENT 0 YS2-6b14.q1k chr02 62 553 1918 1917 F 492 0.00 1246 reject_low 120 ALIGNMENT 0 YS2-6b14.q1k chr02 62 564 2145 2144 F 503 0.00 1246 reject_low 35 ALIGNMENT 40 YS2-6b14.q1k chr08 554 654 1723 1822 F 101 82.18 1246 reject_low 33 ALIGNMENT 0 YS2-6b14.q1k chr15 553 62 1089618 1089617 C 492 0.00 1246 reject_low 29 ALIGNMENT 22 YS2-6b14.q1k chr08 618 565 560562 560614 C 54 83.33 1246 reject_low 137 ALIGNMENT 34 YS2-6b14.q1k chr02 554 662 2278 2385 F 109 79.82 1246 reject_low 104 ALIGNMENT 0 YS2-6b14.q1k chr07 601 62 1089384 1089383 C 540 0.00 1246 reject_low 59 ALIGNMENT 35 YS2-6b14.q1k chr10 554 710 1957 2111 F 157 76.43 1246 reject_low 48 ALIGNMENT 45 YS2-6b14.q1k chr02 565 755 2145 2330 F 191 76.96 1246 reject_low 35 ALIGNMENT 34 YS2-6b14.q1k chr12 554 662 1719 1826 F 109 79.82 1246 reject_low 105 ALIGNMENT 26 YS2-6b14.q1k chr12 565 629 7553 7616 F 65 83.08 1246 reject_low 130 ALIGNMENT 0 YS2-6b14.q1k chr09 62 553 1758 1757 F 492 0.00 1246 reject_low 49 ALIGNMENT 29 YS2-6b14.q1k chr10 565 645 2148 2227 F 81 81.48 1246 reject_low 122 ALIGNMENT 0 YS2-6b14.q1k chr12 62 553 1755 1754 F 492 0.00 1246 reject_low 68 ALIGNMENT 0 YS2-6b14.q1k chr09 62 553 1722 1721 F 492 0.00 1246 reject_low 43 ALIGNMENT 0 YS2-6b14.p1k chr05 151 62 6339 6338 C 90 0.00 1330 reject_low 17 ALIGNMENT 46 YS2-6b14.q1k chr02 554 662 1522 1629 F 109 83.49 1246 reject_low 53 ALIGNMENT 36 YS2-6b14.q1k chr07 651 554 1089118 1089214 C 98 81.63 1246 reject_low 101 ALIGNMENT 0 YS2-6b14.q1k chr05 564 62 574983 574982 C 503 0.00 1246 reject_low 126 ALIGNMENT 0 YS2-6b14.q1k chr08 62 553 1723 1722 F 492 0.00 1246 reject_low 33 ALIGNMENT 0 YS2-6b14.q1k chr12 553 62 1069847 1069846 C 492 0.00 1246 reject_low 102 ALIGNMENT 33 YS2-6b14.q1k chr08 554 654 1759 1858 F 101 80.20 1246 reject_low 34 ALIGNMENT 35 YS2-6b14.q1k chr15 654 565 1089338 1089426 C 90 82.22 1246 reject_low 115 ALIGNMENT 0 YS2-6b14.q1k chr12 62 564 2018 2017 F 503 0.00 1246 reject_low 110 ALIGNMENT 35 YS2-6b14.q1k chr15 654 553 1089302 1089402 C 102 80.39 1246 reject_low 99 ALIGNMENT 67 YS2-6b14.q1k chr05 755 554 575085 575281 C 202 80.20 1246 reject_low 21 ALIGNMENT 28 YS2-6b14.q1k chr15 645 565 1089239 1089318 C 81 81.48 1246 reject_low 128 ALIGNMENT 0 YS2-6b14.q1k chr10 62 553 1741 1740 F 492 0.00 1246 reject_low 50 ALIGNMENT 0 YS2-6b14.q1k chr10 62 553 2065 2064 F 492 0.00 1246 reject_low 67 ALIGNMENT 22 YS2-6b14.q1k chr12 619 553 1076265 1076330 C 67 80.60 1246|9,0 reject_low 140 ALIGNMENT 621 YS2-6b14.q1k chr12 1 710 6774 7480 F 710 96.48 1246 ambiguous_tel 2 ALIGNMENT 591 YS2-6b14.q1k chr08 1 662 1099 1758 F 662 96.98 1246 reject_low 18 ALIGNMENT 25 YS2-6b14.q1k chr16 565 628 1710 1772 F 64 82.81 1246 reject_low 132 ALIGNMENT 0 YS2-6b14.q1k chr10 62 553 2101 2100 F 492 0.00 1246 reject_low 87 ALIGNMENT 48 YS2-6b14.q1k chr09 554 651 1794 1890 F 98 85.71 1246 reject_low 54 ALIGNMENT 43 YS2-6b14.q1k chr10 554 654 1813 1912 F 101 83.17 1246 reject_low 73 ALIGNMENT 864 YS2-6b14.p1k chr08 34 1248 557050 558236 F 1215 92.51 1330 reject_low 9 ALIGNMENT 36 YS2-6b14.q1k chr06 565 654 976 1064 F 90 82.22 1246 reject_low 109 ALIGNMENT 33 YS2-6b14.q1k chr16 662 565 946207 946303 C 98 80.61 1246 reject_low 117 ALIGNMENT 0 YS2-6b14.q1k chr08 62 553 1759 1758 F 492 0.00 1246 reject_low 34 ALIGNMENT 37 YS2-6b14.q1k chr16 554 662 1663 1770 F 109 80.73 1246 reject_low 95 ALIGNMENT 621 YS2-6b14.q1k chr16 1 710 931 1637 F 710 96.48 1246 ambiguous_tel 8 ALIGNMENT 0 YS2-6b14.q1k chr05 62 553 1506 1505 F 492 0.00 1246 reject_low 46 ALIGNMENT 624 YS2-6b14.q1k chr13 1 710 1115 1821 F 710 96.62 1246 ambiguous_tel 1 ALIGNMENT 22 YS2-6b14.q1k chr13 553 619 2026 2091 F 67 80.60 1246 reject_low 134 ALIGNMENT 0 YS2-6b14.q1k chr02 62 553 2242 2241 F 492 0.00 1246 reject_low 79 ALIGNMENT 0 YS2-6b14.q1k chr15 552 62 1089295 1089294 C 491 0.00 1246 reject_low 135 ALIGNMENT 0 YS2-6b14.p1k chr08 412 276 4952 4971 C 137 0.00 1330 reject_low 18 ALIGNMENT 0 YS2-6b14.q1k chr12 62 553 1827 1826 F 492 0.00 1246 reject_low 31 ALIGNMENT 0 YS2-6b14.q1k chr15 564 62 1089427 1089426 C 503 0.00 1246 reject_low 115 ALIGNMENT 29 YS2-6b14.q1k chr13 565 645 2002 2081 F 81 81.48 1246 reject_low 124 ALIGNMENT 0 YS2-6b14.q1k chr13 62 564 2002 2001 F 503 0.00 1246 reject_low 124 ALIGNMENT 34 YS2-6b14.q1k chr12 662 554 1076294 1076401 C 109 79.82 1246 reject_low 106 ALIGNMENT 0 YS2-6b14.q1k chr10 62 564 2004 2003 F 503 0.00 1246 reject_low 71 ALIGNMENT 67 YS2-6b14.q1k chr16 554 755 1519 1715 F 202 80.20 1246 reject_low 30 ALIGNMENT 880 YS2-6b14.p1k chr09 1248 34 5733 6933 C 1215 92.76 1330 reject_low 12 ALIGNMENT 0 YS2-6b14.q1k chr16 564 62 946304 946303 C 503 0.00 1246 reject_low 117 ALIGNMENT 0 YS2-6b14.q1k chr08 62 579 1857 1856 F 518 0.00 1246 reject_low 36 ALIGNMENT 36 YS2-6b14.q1k chr14 554 651 1754 1850 F 98 81.63 1246 reject_low 103 ALIGNMENT 24 YS2-6b14.q1k chr05 554 593 1722 1761 F 40 90.00 1246 reject_low 129 ALIGNMENT 20 YS2-6b14.q1k chr02 565 619 2361 2414 F 55 81.82 1246 reject_low 138 ALIGNMENT 0 YS2-6b14.q1k chr05 62 553 1578 1577 F 492 0.00 1246 reject_low 47 ALIGNMENT 43 YS2-6b14.q1k chr08 662 602 560770 560830 C 61 91.80 1246 reject_low 60 ALIGNMENT 555 YS2-6b14.q1k chr09 1 710 1134 1840 F 710 93.38 1246 reject_low 12 ALIGNMENT 53 YS2-6b14.q1k chr08 602 755 1662 1811 F 154 80.52 1246 reject_low 19 ALIGNMENT 37 YS2-6b14.q1k chr10 554 690 1849 1983 F 137 78.10 1246 reject_low 52 ALIGNMENT 36 YS2-6b14.q1k chr13 565 654 1894 1982 F 90 82.22 1246 reject_low 111 ALIGNMENT 0 YS2-6b14.q1k chr02 62 553 2026 2025 F 492 0.00 1246 reject_low 74 ALIGNMENT 0 YS2-6b14.q1k chr05 553 62 575138 575137 C 492 0.00 1246 reject_low 86 ALIGNMENT 25 YS2-6b14.p1k chr08 275 251 4972 4996 C 25 100.00 1330 reject_low 18,19,32,33,34,36 ALIGNMENT 693 YS2-6b14.p1k chr12 34 1248 1065217 1066367 F 1215 88.97 1330 reject_low 15 ALIGNMENT 0 YS2-6b14.q1k chr12 62 601 1694 1693 F 540 0.00 1246 reject_low 39 ALIGNMENT 37 YS2-6b14.q1k chr13 554 662 1847 1954 F 109 80.73 1246 reject_low 92 ALIGNMENT 43 YS2-6b14.q1k chr12 662 602 1076618 1076678 C 61 91.80 1246 reject_low 61 ALIGNMENT 46 YS2-6b14.q1k chr10 554 654 2065 2164 F 101 84.16 1246 reject_low 67 ALIGNMENT 23 YS2-6b14.q1k chr08 580 628 1857 1904 F 49 85.71 1246 reject_low 36 ALIGNMENT 0 YS2-6b14.q1k chr08 601 62 560831 560830 C 540 0.00 1246 reject_low 60 ALIGNMENT 39 YS2-6b14.q1k chr02 565 654 2217 2305 F 90 83.33 1246 reject_low 96 ALIGNMENT 0 YS2-6b14.q1k chr12 62 556 1902 1901 F 495 0.00 1246 reject_low 118 ALIGNMENT 627 YS2-6b14.q1k chr14 1 710 1022 1728 F 710 96.76 1246 ambiguous_tel 6 ALIGNMENT 67 YS2-6b14.q1k chr12 755 554 1069794 1069990 C 202 80.20 1246 reject_low 25 ALIGNMENT 0 YS2-6b14.q1k chr15 553 62 1089366 1089365 C 492 0.00 1246 reject_low 107 ALIGNMENT 0 YS2-6b14.q1k chr02 62 553 2278 2277 F 492 0.00 1246 reject_low 104 ALIGNMENT 47 YS2-6b14.q1k chr16 710 602 946376 946483 C 109 82.57 1246 reject_low 40 ALIGNMENT 0 YS2-6b14.q1k chr10 62 553 1849 1848 F 492 0.00 1246 reject_low 52 ALIGNMENT 43 YS2-6b14.q1k chr12 602 662 7337 7397 F 61 91.80 1246|9,0 reject_low 139 ALIGNMENT 43 YS2-6b14.q1k chr12 662 602 1069955 1070015 C 61 91.80 1246|0,9 reject_low 140 ALIGNMENT 0 YS2-6b14.q1k chr05 553 62 575030 575029 C 492 0.00 1246 reject_low 85 ALIGNMENT 36 YS2-6b14.q1k chr04 651 554 1530212 1530308 C 98 81.63 1246 reject_low 100 ALIGNMENT 0 YS2-6b14.q1k chr02 62 564 2325 2324 F 503 0.00 1246 reject_low 131 ALIGNMENT 713 YS2-6b14.p1k chr16 265 1248 942804 943782 F 984 92.58 1330 reject_low 16 ALIGNMENT 40 YS2-6b14.q1k chr02 554 654 2242 2341 F 101 82.18 1246 reject_low 79 ALIGNMENT 0 YS2-6b14.q1k chr10 62 552 2172 2171 F 491 0.00 1246 reject_low 136 ALIGNMENT 43 YS2-6b14.q1k chr04 662 602 1530417 1530477 C 61 91.80 1246 reject_low 57 ALIGNMENT 0 YS2-6b14.q1k chr15 553 62 1089474 1089473 C 492 0.00 1246 reject_low 94 ALIGNMENT 0 YS2-6b14.q1k chr08 553 62 560806 560805 C 492 0.00 1246 reject_low 23 ALIGNMENT 0 YS2-6b14.q1k chr13 62 553 1955 1954 F 492 0.00 1246 reject_low 93 ALIGNMENT 28 YS2-6b14.q1k chr09 554 617 1830 1892 F 64 84.38 1246 reject_low 125 ALIGNMENT 47 YS2-6b14.q1k chr12 602 710 1694 1801 F 109 82.57 1246 reject_low 39 ALIGNMENT 0 YS2-6b14.q1k chr05 552 62 575067 575066 C 491 0.00 1246 reject_low 82 ALIGNMENT 765 YS2-6b14.p1k chr05 34 1143 570388 571463 F 1110 92.16 1330 reject_low 14 ALIGNMENT 21 YS2-6b14.q1k chr10 553 621 2172 2239 F 69 79.71 1246 reject_low 136 ALIGNMENT 0 YS2-6b14.q1k chr14 62 601 1585 1584 F 540 0.00 1246 reject_low 63 ALIGNMENT 0 YS2-6b14.q1k chr13 62 553 1847 1846 F 492 0.00 1246 reject_low 92 ALIGNMENT 41 YS2-6b14.q1k chr05 554 710 1578 1732 F 157 77.71 1246 reject_low 47 ALIGNMENT 42 YS2-6b14.q1k chr08 651 554 560565 560661 C 98 83.67 1246 reject_low 77 ALIGNMENT 36 YS2-6b14.q1k chr12 651 554 1069750 1069846 C 98 81.63 1246 reject_low 102 ALIGNMENT 0 YS2-6b14.q1k chr10 62 553 2029 2028 F 492 0.00 1246 reject_low 51 ALIGNMENT 0 YS2-6b14.q1k chr08 62 601 1662 1661 F 540 0.00 1246 reject_low 19 ALIGNMENT 40 YS2-6b14.q1k chr02 554 662 1630 1737 F 109 81.65 1246 reject_low 76 ALIGNMENT 0 YS2-6b14.q1k chr12 552 62 1076439 1076438 C 491 0.00 1246 reject_low 98 ALIGNMENT 0 YS2-6b14.q1k chr10 62 553 1957 1956 F 492 0.00 1246 reject_low 48 ALIGNMENT 0 YS2-6b14.q1k chr02 62 552 1953 1952 F 491 0.00 1246 reject_low 81 ALIGNMENT 34 YS2-6b14.q1k chr16 662 554 946351 946458 C 109 79.82 1246 reject_low 108 ALIGNMENT 42 YS2-6b14.q1k chr02 554 654 2026 2125 F 101 83.17 1246 reject_low 74 ALIGNMENT 591 YS2-6b14.p1k chr05 1143 152 5400 6338 C 992 89.82 1330 reject_low 17 ALIGNMENT 0 YS2-6b14.q1k chr12 62 553 1971 1970 F 492 0.00 1246 reject_low 88 ALIGNMENT 0 YS2-6b14.q1k chr12 62 564 2126 2125 F 503 0.00 1246 reject_low 123 ALIGNMENT 22 YS2-6b14.q1k chr15 619 553 1089229 1089294 C 67 80.60 1246 reject_low 135 ALIGNMENT 28 YS2-6b14.q1k chr05 645 565 574903 574982 C 81 81.48 1246 reject_low 126 ALIGNMENT 0 YS2-6b14.q1k chr02 62 553 1738 1737 F 492 0.00 1246 reject_low 78 ALIGNMENT 0 YS2-6b14.q1k chr12 62 553 7362 7361 F 492 0.00 1246 reject_low 24 ALIGNMENT 42 YS2-6b14.q1k chr02 554 654 2098 2197 F 101 83.17 1246 reject_low 75 ALIGNMENT 1025 YS2-6b14.p1k chr13 1248 34 4270 5473 C 1215 96.13 1330 ambiguous_tel 1 ALIGNMENT 38 YS2-6b14.q1k chr05 654 553 574966 575066 C 102 81.37 1246 reject_low 82 ALIGNMENT 0 YS2-6b14.q1k chr12 610 611 1070007 1076273 C 0 0.00 1246 reject_low 140 ALIGNMENT 37 YS2-6b14.q1k chr13 554 662 1955 2062 F 109 80.73 1246 reject_low 93 ALIGNMENT 1021 YS2-6b14.p1k chr12 34 1248 1071715 1072919 F 1215 95.97 1330 ambiguous_tel 4 ALIGNMENT 0 YS2-6b14.q1k chr16 553 62 946387 946386 C 492 0.00 1246 reject_low 45 ALIGNMENT 48 YS2-6b14.q1k chr10 554 651 1777 1873 F 98 85.71 1246 reject_low 55 ALIGNMENT 34 YS2-6b14.q1k chr15 662 554 1089258 1089365 C 109 79.82 1246 reject_low 107 ALIGNMENT 0 YS2-6b14.q1k chr16 62 601 1494 1493 F 540 0.00 1246 reject_low 65 ALIGNMENT 621 YS2-6b14.q1k chr07 710 1 1089240 1089946 C 710 96.48 1246 ambiguous_tel 7 ALIGNMENT 621 YS2-6b14.q1k chr12 710 1 1076535 1077241 C 710 96.48 1246 ambiguous_tel 4 ALIGNMENT 0 YS2-6b14.q1k chr02 62 552 1845 1844 F 491 0.00 1246 reject_low 80 ALIGNMENT 0 YS2-6b14.q1k chr16 62 564 1710 1709 F 503 0.00 1246 reject_low 132 ALIGNMENT 38 YS2-6b14.q1k chr12 553 654 2042 2142 F 102 81.37 1246 reject_low 83 ALIGNMENT 50 YS2-6b14.q1k chr12 554 710 1791 1945 F 157 79.62 1246 reject_low 42 ALIGNMENT 864 YS2-6b15.p1k chr13 113 1196 704548 705638 F 1084 94.46 1332 accept 0 ALIGNMENT 0 YS2-6b16.q1k chrm 163 122 34977 34976 C 42 0.00 1394 reject_low 11 ALIGNMENT 0 YS2-6b16.q1k chrm 375 214 11040 11039 C 162 0.00 1394 reject_low 7 ALIGNMENT 0 YS2-6b16.q1k chrm 375 216 69434 69433 C 160 0.00 1394 reject_low 2 ALIGNMENT 0 YS2-6b16.p1k chrm 77 658 4537 4536 F 582 0.00 1341 reject_low 4,7 ALIGNMENT 27 YS2-6b16.p1k chrm 707 678 11499 11528 C 30 96.67 1341 reject_low 22 ALIGNMENT 0 YS2-6b16.q1k chrm 162 122 9075 9074 C 41 0.00 1394 reject_low 4 ALIGNMENT 130 YS2-6b16.p1k chrm 1151 849 47696 48007 C 303 86.14 1341|0,5 reject_bad_break 0 reject_low 1 ALIGNMENT 0 YS2-6b16.p1k chrm 847 77 53758 53757 C 771 0.00 1341 reject_low 12 ALIGNMENT 0 YS2-6b16.p1k chrm 628 77 8308 8307 C 552 0.00 1341 reject_low 8 ALIGNMENT 0 YS2-6b16.p1k chrm 658 77 10788 10787 C 582 0.00 1341 reject_low 21 ALIGNMENT 0 YS2-6b16.p1k chrm 855 709 8229 8228 C 147 0.00 1341 reject_low 8 ALIGNMENT 0 YS2-6b16.q1k chrm 162 122 35849 35848 C 41 0.00 1394 reject_low 17 ALIGNMENT 0 YS2-6b16.p1k chrm 855 709 80495 80494 C 147 0.00 1341 reject_low 14 ALIGNMENT 0 YS2-6b16.p1k chrm 658 77 81446 81445 C 582 0.00 1341 reject_low 20 ALIGNMENT 0 YS2-6b16.q1k chrm 375 263 8978 8977 C 113 0.00 1394 reject_low 4 ALIGNMENT 0 YS2-6b16.p1k chrm 677 77 11529 11528 C 601 0.00 1341 reject_low 22 ALIGNMENT 0 YS2-6b16.q1k chrm 375 218 34924 34923 C 158 0.00 1394 reject_low 11 ALIGNMENT 0 YS2-6b16.q1k chrm 162 122 52815 52814 C 41 0.00 1394 reject_low 19 ALIGNMENT 0 YS2-6b16.q1k chrm 375 233 29814 29813 C 143 0.00 1394 reject_low 10 ALIGNMENT 0 YS2-6b16.p1k chrm 682 77 34953 34952 C 606 0.00 1341 reject_low 24 ALIGNMENT 0 YS2-6b16.q1k chrm 162 122 50154 50153 C 41 0.00 1394 reject_low 9 ALIGNMENT 0 YS2-6b16.q1k chrm 162 122 29884 29883 C 41 0.00 1394 reject_low 10 ALIGNMENT 61 YS2-6b16.p1k chrm 709 620 11038 11129 C 90 92.22 1341 reject_low 5 ALIGNMENT 0 YS2-6b16.p1k chrm 658 77 80545 80544 C 582 0.00 1341 reject_low 14 ALIGNMENT 20 YS2-6b16.p1k chrm 869 848 53736 53757 C 22 100.00 1341 reject_low 12 ALIGNMENT 42 YS2-6b16.q1k chrm 232 163 29813 29883 C 70 88.57 1394 reject_low 10 ALIGNMENT 37 YS2-6b16.p1k chrm 700 659 81404 81445 C 42 100.00 1341 reject_low 20 ALIGNMENT 0 YS2-6b16.p1k chrm 853 854 48003 53666 C 0 0.00 1341 reject_low 1 ALIGNMENT 50 YS2-6b16.q1k chrm 262 163 8977 9074 C 100 87.00 1394 reject_low 4 ALIGNMENT 42 YS2-6b16.q1k chrm 209 163 34283 34329 C 47 97.87 1394 reject_low 13 ALIGNMENT 25 YS2-6b16.p1k chrm 710 683 34925 34952 C 28 96.43 1341 reject_low 24 ALIGNMENT 0 YS2-6b16.p1k chrm 848 803 48008 48000 C 46 0.00 1341 reject_bad_break 0 ALIGNMENT 50 YS2-6b16.q1k chrm 235 163 50079 50153 C 73 90.41 1394 reject_low 9 ALIGNMENT 54 YS2-6b16.p1k chrm 796 886 70459 70545 F 91 89.01 1341 reject_low 3 ALIGNMENT 0 YS2-6b16.p1k chrm 855 701 10747 10746 C 155 0.00 1341 reject_low 21 ALIGNMENT 0 YS2-6b16.p1k chrm 855 707 46310 46309 C 149 0.00 1341 reject_low 6 ALIGNMENT 52 YS2-6b16.p1k chrm 857 796 53663 53722 C 62 96.77 1341|4,0 reject_low 1 ALIGNMENT 45 YS2-6b16.q1k chrm 215 163 69433 69486 C 53 96.23 1394 reject_low 2 ALIGNMENT 20 YS2-6b16.p1k chrm 877 901 57299 57324 F 25 96.00 1341 reject_low 2 ALIGNMENT 45 YS2-6b16.p1k chrm 659 707 71214 71262 F 49 97.96 1341 reject_low 16 ALIGNMENT 35 YS2-6b16.q1k chrm 163 240 31039 31121 F 78 83.33 1394 reject_low 23 ALIGNMENT 0 YS2-6b16.p1k chrm 77 658 71214 71213 F 582 0.00 1341 reject_low 16 ALIGNMENT 0 YS2-6b16.p1k chrm 728 855 4607 4606 F 128 0.00 1341 reject_low 4,7 ALIGNMENT 0 YS2-6b16.p1k chrm 724 876 57094 57298 F 153 0.00 1341 reject_low 2 ALIGNMENT 49 YS2-6b16.p1k chrm 708 629 8228 8307 C 80 87.50 1341 reject_low 8 ALIGNMENT 0 YS2-6b16.q1k chrm 122 162 31039 31038 F 41 0.00 1394 reject_low 23 ALIGNMENT 0 YS2-6b16.p1k chrm 740 707 82963 83047 C 34 0.00 1341 reject_low 18 ALIGNMENT 48 YS2-6b16.q1k chrm 217 164 34923 34976 C 54 96.30 1394 reject_low 11 ALIGNMENT 0 YS2-6b16.q1k chrm 375 208 35805 35804 C 168 0.00 1394 reject_low 17 ALIGNMENT 0 YS2-6b16.p1k chrm 855 708 11500 11499 C 148 0.00 1341 reject_low 22 ALIGNMENT 35 YS2-6b16.p1k chrm 659 727 4537 4607 F 69 85.51 1341 reject_low 4,7 ALIGNMENT 0 YS2-6b16.p1k chrm 855 707 65767 65766 C 149 0.00 1341 reject_low 15 ALIGNMENT 33 YS2-6b16.q1k chrm 205 163 52772 52814 C 43 95.35 1394 reject_low 19 ALIGNMENT 54 YS2-6b16.p1k chrm 873 741 82834 82962 C 133 84.96 1341 reject_low 18 ALIGNMENT 0 YS2-6b16.q1k chrm 241 375 31121 31120 F 135 0.00 1394 reject_low 23 ALIGNMENT 0 YS2-6b16.p1k chrm 795 700 53723 53827 C 96 0.00 1341 reject_low 1 ALIGNMENT 50 YS2-6b16.p1k chrm 725 659 34263 34328 C 67 94.03 1341 reject_low 23 ALIGNMENT 43 YS2-6b16.p1k chrm 706 659 83048 83095 C 48 97.92 1341 reject_low 18 ALIGNMENT 0 YS2-6b16.q1k chrm 162 122 34330 34329 C 41 0.00 1394 reject_low 13 ALIGNMENT 0 YS2-6b16.p1k chrm 855 701 81405 81404 C 155 0.00 1341 reject_low 20 ALIGNMENT 46 YS2-6b16.q1k chrm 213 164 11039 11088 C 50 98.00 1394 reject_low 7 ALIGNMENT 45 YS2-6b16.p1k chrm 708 659 80494 80544 C 50 98.00 1341 reject_low 14 ALIGNMENT 36 YS2-6b16.q1k chrm 207 163 35804 35848 C 45 95.56 1394 reject_low 17 ALIGNMENT 0 YS2-6b16.q1k chrm 163 122 11089 11088 C 42 0.00 1394 reject_low 7 ALIGNMENT 0 YS2-6b16.q1k chrm 375 210 34284 34283 C 166 0.00 1394 reject_low 13 ALIGNMENT 292 YS2-6b16.q1k chrm 83 510 47394 47828 F 428 94.16 1394 reject_low 1 ALIGNMENT 0 YS2-6b16.p1k chrm 658 77 53869 53868 C 582 0.00 1341 reject_low 1 ALIGNMENT 54 YS2-6b16.p1k chrm 659 723 57030 57093 F 65 95.38 1341 reject_low 2 ALIGNMENT 63 YS2-6b16.p1k chrm 706 626 46309 46392 C 81 93.83 1341 reject_low 6 ALIGNMENT 0 YS2-6b16.p1k chrm 708 855 71262 71261 F 148 0.00 1341 reject_low 16 ALIGNMENT 0 YS2-6b16.p1k chrm 77 658 57030 57029 F 582 0.00 1341 reject_low 2 ALIGNMENT 0 YS2-6b16.p1k chrm 658 77 34329 34328 C 582 0.00 1341 reject_low 23 ALIGNMENT 0 YS2-6b16.p1k chrm 625 77 46393 46392 C 549 0.00 1341 reject_low 6 ALIGNMENT 542 YS2-6b16.p1k chrm 802 72 48001 48724 C 731 99.04 1341 reject_bad_break 0 ALIGNMENT 0 YS2-6b16.p1k chrm 658 77 83096 83095 C 582 0.00 1341 reject_low 18 ALIGNMENT 0 YS2-6b16.p1k chrm 855 710 11039 11038 C 146 0.00 1341 reject_low 5 ALIGNMENT 36 YS2-6b16.p1k chrm 699 659 53828 53868 C 41 100.00 1341 reject_low 1 ALIGNMENT 41 YS2-6b16.p1k chrm 706 656 65766 65816 C 51 94.12 1341 reject_low 15 ALIGNMENT 0 YS2-6b16.p1k chrm 847 726 34251 34262 C 122 0.00 1341 reject_low 23 ALIGNMENT 0 YS2-6b16.q1k chrm 162 122 69487 69486 C 41 0.00 1394 reject_low 2 ALIGNMENT 0 YS2-6b16.p1k chrm 619 77 11130 11129 C 543 0.00 1341 reject_low 5 ALIGNMENT 0 YS2-6b16.q1k chrm 375 236 50080 50079 C 140 0.00 1394 reject_low 9 ALIGNMENT 0 YS2-6b16.p1k chrm 655 77 65817 65816 C 579 0.00 1341 reject_low 15 ALIGNMENT 376 YS2-6b16.q1k chrm 42 685 47353 48003 F 644 90.37 1394 reject_bad_break 0 ALIGNMENT 0 YS2-6b16.q1k chrm 375 206 52773 52772 C 170 0.00 1394 reject_low 19 ALIGNMENT 0 YS2-6b16.p1k chrm 847 711 34251 34924 C 137 0.00 1341 reject_low 24 ALIGNMENT 0 YS2-6b16.p1k chrm 77 795 70459 70458 F 719 0.00 1341 reject_low 3 ALIGNMENT 34 YS2-6b16.p1k chrm 700 659 10746 10787 C 42 97.62 1341 reject_low 21 ALIGNMENT 23 YS2-6b16.p1k chrm 874 848 34224 34250 C 27 100.00 1341 reject_low 23,24 ALIGNMENT 391 YS2-6b17.q1k chr15 672 45 523258 523885 C 628 88.06 1380 reject_low 1 ALIGNMENT 922 YS2-6b17.p1k chr14 1181 38 428094 429251 C 1144 94.93 1315 accept 0 ALIGNMENT 558 YS2-6b17.q1k chr14 45 792 425895 426638 F 748 92.51 1380 accept 0 ALIGNMENT 553 YS2-6b18.p1k chr14 1061 265 428252 429048 C 797 90.72 1373 accept 0 ALIGNMENT 470 YS2-6b21.q1k chr10 53 853 610481 611272 F 801 88.14 1405 accept 0 ALIGNMENT 593 YS2-6b21.p1k chr10 1149 234 615183 616088 C 916 88.54 1253 accept 0 ALIGNMENT 923 YS2-6b22.p1k chr12 77 1126 136315 137381 F 1050 97.24 1192 accept 0 ALIGNMENT 537 YS2-6b22.q1k chr12 865 4 140513 141362 C 862 89.79 1320 accept 0 ALIGNMENT 291 YS2-6b24.p1k vc_2 468 1 1271 1749 C 468 88.68 479 reject_vc 2 ALIGNMENT 291 YS2-6b24.p1k vc_5 468 1 4191 4669 C 468 88.68 479 reject_vc 4 ALIGNMENT 291 YS2-6b24.p1k vc_1 468 1 1271 1749 C 468 88.68 479 reject_vc 1 ALIGNMENT 227 YS2-6b24.q1k chr15 47 406 351276 351632 F 360 89.17 1569 accept 0 ALIGNMENT 291 YS2-6b24.p1k vc_6 1 468 3712 4190 F 468 88.89 479 reject_vc 5 ALIGNMENT 291 YS2-6b24.p1k vc_3 468 1 1271 1749 C 468 88.68 479 reject_vc 3 ALIGNMENT 285 YS2-6b24.p1k vc_7 1 468 456 934 F 468 88.46 479 reject_vc 6 ALIGNMENT 285 YS2-6b24.p1k vc_7 1 468 13918 14396 F 468 88.46 479 reject_vc 7 ALIGNMENT 582 YS2-6c03.q1k chr10 27 860 496732 497558 F 834 92.09 1357 accept 0 ALIGNMENT 961 YS2-6c03.p1k chr10 1151 71 499956 501049 C 1081 97.50 1470 accept 0 ALIGNMENT 437 YS2-6c04.p1k chr10 913 94 500225 501039 C 820 85.24 1494 accept 0 ALIGNMENT 511 YS2-6c04.q1k chr10 40 783 496732 497464 F 744 91.53 1515 accept 0 ALIGNMENT 312 YS2-6c05.q1k chr12 45 591 842184 842727 F 547 87.57 1367 accept 0 ALIGNMENT 747 YS2-6c07.q1k chr04 1020 31 121033 122015 C 990 93.33 1285 accept 0 ALIGNMENT 908 YS2-6c07.p1k chr04 44 1049 120126 121140 F 1006 98.11 1263 accept 0 ALIGNMENT 0 YS2-6c09.q1k vc_7 53 54 5172 6360 C 0 0.00 1077 reject_low 6 ALIGNMENT 248 YS2-6c09.q1k vc_5 1 405 2556 2957 F 405 87.90 1077 reject_vc 0 ALIGNMENT 227 YS2-6c09.q1k vc_2 1 302 2322 2623 F 302 92.05 1077 reject_low 4 ALIGNMENT 227 YS2-6c09.q1k vc_3 1 302 2689 2990 F 302 92.05 1077 reject_low 5 ALIGNMENT 241 YS2-6c09.q1k vc_4 405 1 5251 5654 C 405 87.41 1077 reject_vc 1 ALIGNMENT 173 YS2-6c09.q1k vc_7 302 53 4923 5172 C 250 90.00 1077|0,1 reject_low 6 ALIGNMENT 244 YS2-6c09.q1k vc_7 357 1 2214 2569 C 357 89.92 1077 reject_vc 2 ALIGNMENT 51 YS2-6c09.q1k vc_7 54 3 6360 6411 C 52 100.00 1077|1,0 reject_low 6 ALIGNMENT 227 YS2-6c09.q1k vc_1 1 302 2689 2990 F 302 92.05 1077 reject_low 3 ALIGNMENT 0 YS2-6c11.q1k chr03 579 115 260137 260136 C 465 0.00 1324 reject_low 1 ALIGNMENT 1030 YS2-6c11.p1k chr08 1179 31 368554 369697 C 1149 97.04 1356 accept 0 ALIGNMENT 72 YS2-6c11.q1k chr03 114 29 260136 260222 C 86 97.67 1324 reject_low 1 ALIGNMENT 0 YS2-6c11.q1k chr08 92 114 366241 366240 F 23 0.00 1324 accept 0 ALIGNMENT 664 YS2-6c11.q1k chr08 115 881 366241 367004 F 767 96.35 1324 accept 0 ALIGNMENT 954 YS2-6c13.p1k chr14 36 1099 295087 296159 F 1064 97.46 1308 accept 0 ALIGNMENT 454 YS2-6c13.q1k chr14 706 27 297969 298644 C 680 90.00 1379 accept 0 ALIGNMENT 523 YS2-6c14.q1k chr11 744 43 55407 56106 C 702 92.88 1316 accept 0 ALIGNMENT 978 YS2-6c14.p1k chr11 35 1221 51075 52269 F 1187 96.12 1342 accept 0 ALIGNMENT 0 YS2-6c16.q1k vc_4 62 238 1548 1547 F 177 0.00 763 reject_vc 9 ALIGNMENT 25 YS2-6c16.q1k vc_4 303 239 48 112 C 65 80.00 763 reject_vc 8 ALIGNMENT 25 YS2-6c16.q1k vc_4 303 239 6275 6339 C 65 80.00 763 reject_vc 10 ALIGNMENT 0 YS2-6c16.q1k vc_4 238 62 6340 6339 C 177 0.00 763 reject_vc 10 ALIGNMENT 245 YS2-6c16.q1k vc_4 394 2 5262 5654 C 393 88.04 763 reject_vc 3 ALIGNMENT 228 YS2-6c16.q1k vc_2 2 303 2322 2623 F 302 92.05 763 reject_vc 5 ALIGNMENT 174 YS2-6c16.q1k vc_7 303 54 4923 5172 C 250 90.00 763|0,1 reject_vc 7 ALIGNMENT 51 YS2-6c16.q1k vc_7 55 4 6360 6411 C 52 100.00 763|1,0 reject_vc 7 ALIGNMENT 265 YS2-6c16.q1k vc_5 2 503 2556 3045 F 502 86.25 763 reject_vc 1 ALIGNMENT 228 YS2-6c16.q1k vc_3 2 303 2689 2990 F 302 92.05 763 reject_vc 6 ALIGNMENT 262 YS2-6c16.q1k vc_7 442 2 2134 2569 C 441 87.30 763 reject_vc 2 ALIGNMENT 266 YS2-6c16.p1k chr14 314 34 272264 272544 C 281 99.64 332 accept 0 ALIGNMENT 0 YS2-6c16.q1k vc_4 238 62 113 112 C 177 0.00 763 reject_vc 8 ALIGNMENT 25 YS2-6c16.q1k vc_4 239 303 1548 1612 F 65 80.00 763 reject_vc 9 ALIGNMENT 228 YS2-6c16.q1k vc_1 2 303 2689 2990 F 302 92.05 763 reject_vc 4 ALIGNMENT 0 YS2-6c16.p1k chr14 332 315 272265 272264 C 18 0.00 332 accept 0 ALIGNMENT 0 YS2-6c16.q1k vc_7 54 55 5172 6360 C 0 0.00 763 reject_vc 7 ALIGNMENT 930 YS2-6c19.p1k chr13 1310 70 891607 892829 C 1241 94.12 1323 accept 0 ALIGNMENT 480 YS2-6c19.q1k chr13 28 809 890019 890796 F 782 88.87 1305 accept 0 ALIGNMENT 885 YS2-6c22.p1k chr03 1148 78 59609 60687 C 1071 94.40 1315 accept 0 ALIGNMENT 37 YS2-6c23.q1k vc_1 273 233 2472 2512 C 41 97.56 1323 reject_low 11 ALIGNMENT 280 YS2-6c23.q1k vc_2 273 731 2164 2613 F 459 88.89 1323 reject_vc 3 ALIGNMENT 33 YS2-6c23.q1k vc_5 270 235 1 36 C 36 97.22 1323 reject_low 16 ALIGNMENT 36 YS2-6c23.q1k vc_5 273 235 5025 5063 C 39 97.44 1323 reject_low 14 ALIGNMENT 0 YS2-6c23.q1k vc_4 152 232 5831 5830 F 81 0.00 1323 reject_vc 9 ALIGNMENT 125 YS2-6c23.p1k chr10 72 202 277666 277796 F 131 98.47 217 accept_chi 1 ALIGNMENT 0 YS2-6c23.p1k chr10 203 217 277796 277795 F 15 0.00 217 accept_chi 1 ALIGNMENT 0 YS2-6c23.q1k vc_2 152 272 2164 2163 F 121 0.00 1323 reject_vc 3 ALIGNMENT 132 YS2-6c23.q1k vc_4 273 435 126 287 F 163 95.09 1323 reject_vc 8 ALIGNMENT 280 YS2-6c23.q1k vc_5 273 731 2398 2847 F 459 88.89 1323 reject_vc 5 ALIGNMENT 275 YS2-6c23.q1k vc_4 731 273 5361 5812 C 459 88.24 1323 reject_vc 7 ALIGNMENT 0 YS2-6c23.q1k vc_5 152 272 2398 2397 F 121 0.00 1323 reject_vc 5 ALIGNMENT 0 YS2-6c23.q1k vc_4 152 272 126 125 F 121 0.00 1323 reject_vc 8 ALIGNMENT 0 YS2-6c23.q1k vc_7 152 235 13525 13524 F 84 0.00 1323 reject_low 15 ALIGNMENT 37 YS2-6c23.q1k vc_4 233 273 5831 5871 F 41 97.56 1323 reject_vc 9 ALIGNMENT 0 YS2-6c23.q1k vc_4 272 152 1535 1534 C 121 0.00 1323 reject_low 10 ALIGNMENT 0 YS2-6c23.q1k vc_5 234 152 5064 5063 C 83 0.00 1323 reject_low 14 ALIGNMENT 0 YS2-6c23.q1k vc_2 232 152 2146 2145 C 81 0.00 1323 reject_low 12 ALIGNMENT 280 YS2-6c23.q1k vc_3 273 731 2531 2980 F 459 88.89 1323 reject_vc 4 ALIGNMENT 0 YS2-6c23.q1k vc_3 152 272 2531 2530 F 121 0.00 1323 reject_vc 4 ALIGNMENT 69 YS2-6c23.q1k vc_4 361 273 1446 1534 C 89 93.26 1323 reject_low 10 ALIGNMENT 0 YS2-6c23.q1k chr10 268 234 277627 277626 C 35 0.00 1323 accept_chi 0 ALIGNMENT 126 YS2-6c23.q1k chr10 233 71 277626 277785 C 163 93.87 1323 accept_chi 0 ALIGNMENT 0 YS2-6c23.q1k vc_4 274 273 5872 6353 F 0 0.00 1323 reject_vc 9 ALIGNMENT 280 YS2-6c23.q1k vc_7 731 273 2278 2727 C 459 88.67 1323 reject_vc 6 ALIGNMENT 0 YS2-6c23.q1k vc_1 152 272 2531 2530 F 121 0.00 1323 reject_vc 2 ALIGNMENT 0 YS2-6c23.q1k vc_3 232 152 2513 2512 C 81 0.00 1323 reject_low 13 ALIGNMENT 0 YS2-6c23.q1k vc_4 272 152 5813 5812 C 121 0.00 1323 reject_vc 7 ALIGNMENT 0 YS2-6c23.q1k vc_5 234 152 37 36 C 83 0.00 1323 reject_low 16 ALIGNMENT 132 YS2-6c23.q1k vc_4 273 435 6353 6514 F 163 95.09 1323|1,0 reject_vc 9 ALIGNMENT 0 YS2-6c23.q1k vc_1 232 152 2513 2512 C 81 0.00 1323 reject_low 11 ALIGNMENT 37 YS2-6c23.q1k vc_3 273 233 2472 2512 C 41 97.56 1323 reject_low 13 ALIGNMENT 35 YS2-6c23.q1k vc_7 236 273 13525 13562 F 38 97.37 1323 reject_low 15 ALIGNMENT 37 YS2-6c23.q1k vc_2 273 233 2105 2145 C 41 97.56 1323 reject_low 12 ALIGNMENT 280 YS2-6c23.q1k vc_1 273 731 2531 2980 F 459 88.89 1323 reject_vc 2 ALIGNMENT 0 YS2-6c23.q1k vc_7 272 152 2728 2727 C 121 0.00 1323 reject_vc 6 ALIGNMENT 0 YS2-6d02.p1k chrm 424 923 76649 76648 F 500 0.00 1328 reject_low 13 ALIGNMENT 0 YS2-6d02.q1k chrm 62 328 69049 69048 F 267 0.00 1340 accept 0 ALIGNMENT 267 YS2-6d02.p1k vc_7 846 1250 100 515 F 405 90.12 1328 reject_low 6 ALIGNMENT 39 YS2-6d02.p1k chrm 411 363 71212 71260 C 49 93.88 1328 reject_low 16 ALIGNMENT 26 YS2-6d02.p1k vc_3 876 846 2441 2472 C 31 96.77 1328 reject_low 15 ALIGNMENT 262 YS2-6d02.p1k vc_4 846 1196 5871 6223 F 351 92.59 1328 reject_low 8 ALIGNMENT 0 YS2-6d02.p1k chrm 923 412 71213 71212 C 512 0.00 1328 reject_low 16 ALIGNMENT 34 YS2-6d02.q1k chrm 337 398 73014 73076 F 62 85.48 1340 reject_low 12 ALIGNMENT 26 YS2-6d02.p1k vc_1 876 846 2441 2472 C 31 96.77 1328 reject_low 14 ALIGNMENT 267 YS2-6d02.p1k vc_5 1250 846 4610 5025 C 405 90.12 1328 reject_low 5 ALIGNMENT 0 YS2-6d02.q1k chrm 328 62 71261 71260 C 267 0.00 1340 reject_low 9 ALIGNMENT 267 YS2-6d02.p1k vc_3 1250 846 1690 2105 C 405 90.12 1328 reject_low 4 ALIGNMENT 0 YS2-6d02.p1k vc_2 845 92 2106 2105 C 754 0.00 1328 reject_low 3 ALIGNMENT 0 YS2-6d02.p1k chrm 92 362 69049 69048 F 271 0.00 1328 reject_low 1,9 ALIGNMENT 32 YS2-6d02.q1k chrm 329 392 69049 69111 F 64 84.38 1340 accept 0 ALIGNMENT 0 YS2-6d02.p1k chrm 348 92 9552 9551 C 257 0.00 1328 reject_low 11 ALIGNMENT 0 YS2-6d02.p1k vc_3 923 877 2442 2441 C 47 0.00 1328 reject_low 15 ALIGNMENT 164 YS2-6d02.q1k chrm 744 3 70947 71699 C 742 82.08 1340 reject_low 1 ALIGNMENT 0 YS2-6d02.p1k vc_4 92 845 5871 5870 F 754 0.00 1328 reject_low 8 ALIGNMENT 267 YS2-6d02.p1k vc_1 1250 846 1690 2105 C 405 90.12 1328 reject_low 2 ALIGNMENT 0 YS2-6d02.p1k vc_7 92 845 100 99 F 754 0.00 1328 reject_low 6 ALIGNMENT 224 YS2-6d02.p1k chrm 828 73 70891 71664 C 756 87.70 1328 accept 0 ALIGNMENT 0 YS2-6d02.p1k chrm 923 829 70892 70891 C 95 0.00 1328 accept 0 ALIGNMENT 0 YS2-6d02.p1k vc_5 845 92 5026 5025 C 754 0.00 1328 reject_low 5 ALIGNMENT 41 YS2-6d02.p1k chrm 363 425 69049 69111 F 63 90.48 1328 reject_low 1,9 ALIGNMENT 267 YS2-6d02.p1k vc_7 846 1250 13562 13977 F 405 90.12 1328 reject_low 7 ALIGNMENT 0 YS2-6d02.p1k vc_3 845 92 2106 2105 C 754 0.00 1328 reject_low 4 ALIGNMENT 0 YS2-6d02.p1k vc_1 923 877 2442 2441 C 47 0.00 1328 reject_low 14 ALIGNMENT 0 YS2-6d02.p1k chrm 426 923 69111 69110 F 498 0.00 1328 reject_low 1,9 ALIGNMENT 0 YS2-6d02.q1k chrm 62 336 73014 73013 F 275 0.00 1340 reject_low 12 ALIGNMENT 34 YS2-6d02.q1k chrm 380 329 71209 71260 C 52 88.46 1340 reject_low 9 ALIGNMENT 0 YS2-6d02.p1k chrm 923 507 71256 71255 C 417 0.00 1328 reject_low 10 ALIGNMENT 0 YS2-6d02.p1k chrm 362 92 71261 71260 C 271 0.00 1328 reject_low 16 ALIGNMENT 0 YS2-6d02.p1k vc_1 845 92 2106 2105 C 754 0.00 1328 reject_low 2 ALIGNMENT 0 YS2-6d02.p1k vc_1 845 92 2473 2472 C 754 0.00 1328 reject_low 14 ALIGNMENT 0 YS2-6d02.p1k vc_3 845 92 2473 2472 C 754 0.00 1328 reject_low 15 ALIGNMENT 41 YS2-6d02.p1k chrm 359 423 76586 76649 F 65 89.23 1328 reject_low 13 ALIGNMENT 33 YS2-6d02.p1k chrm 506 452 71255 71309 C 55 100.00 1328 reject_low 10 ALIGNMENT 267 YS2-6d02.p1k vc_2 1250 846 1690 2105 C 405 90.12 1328 reject_low 3 ALIGNMENT 0 YS2-6d02.p1k vc_7 92 845 13562 13561 F 754 0.00 1328 reject_low 7 ALIGNMENT 0 YS2-6d02.p1k chrm 451 92 71310 71309 C 360 0.00 1328 reject_low 10 ALIGNMENT 0 YS2-6d02.p1k chrm 92 358 76586 76585 F 267 0.00 1328 reject_low 13 ALIGNMENT 45 YS2-6d02.p1k chrm 437 349 9461 9551 C 89 85.39 1328 reject_low 11 ALIGNMENT 0 YS2-6d02.p1k chrm 923 438 9462 9461 C 486 0.00 1328 reject_low 11 ALIGNMENT 750 YS2-6d03.p1k chr04 943 65 1128029 1128912 C 879 95.79 1433 accept 0 ALIGNMENT 136 YS2-6d04.q1k vc_4 189 350 6353 6514 F 162 95.06 1395|1,0 reject_low 9 ALIGNMENT 35 YS2-6d04.q1k vc_5 189 150 5025 5063 C 40 97.50 1395 reject_low 14 ALIGNMENT 346 YS2-6d04.q1k vc_4 703 189 5294 5812 C 515 89.51 1395 reject_vc 2 ALIGNMENT 347 YS2-6d04.q1k vc_3 189 625 2531 2969 F 437 93.59 1395 reject_low 6 ALIGNMENT 36 YS2-6d04.q1k vc_4 149 189 5832 5871 F 41 97.56 1395 reject_low 9 ALIGNMENT 350 YS2-6d04.q1k vc_5 189 703 2398 2914 F 515 89.71 1395 reject_vc 0 ALIGNMENT 0 YS2-6d04.q1k vc_2 384 190 2106 2105 C 195 0.00 1395 reject_low 12 ALIGNMENT 169 YS2-6d04.q1k vc_7 625 399 4944 5172 C 227 92.07 1395 reject_low 7 ALIGNMENT 0 YS2-6d04.q1k vc_7 190 384 13562 13561 F 195 0.00 1395 reject_low 15 ALIGNMENT 0 YS2-6d04.q1k vc_4 351 384 6514 6513 F 34 0.00 1395 reject_low 9 ALIGNMENT 0 YS2-6d04.q1k vc_5 384 190 5026 5025 C 195 0.00 1395 reject_low 14 ALIGNMENT 0 YS2-6d04.q1k vc_5 384 183 5 4 C 202 0.00 1395 reject_low 16 ALIGNMENT 350 YS2-6d04.q1k vc_7 703 189 2211 2727 C 515 89.71 1395 reject_vc 1 ALIGNMENT 77 YS2-6d04.q1k vc_4 275 189 1448 1534 C 87 96.55 1395 reject_low 10 ALIGNMENT 36 YS2-6d04.q1k vc_3 189 149 2472 2511 C 41 97.56 1395 reject_low 13 ALIGNMENT 347 YS2-6d04.q1k vc_1 189 625 2531 2969 F 437 93.59 1395 reject_low 4 ALIGNMENT 33 YS2-6d04.q1k vc_5 182 150 4 36 C 33 100.00 1395 reject_low 16 ALIGNMENT 0 YS2-6d04.q1k vc_3 384 190 2473 2472 C 195 0.00 1395 reject_low 13 ALIGNMENT 0 YS2-6d04.q1k vc_4 384 276 1449 1448 C 109 0.00 1395 reject_low 10 ALIGNMENT 136 YS2-6d04.q1k vc_4 189 350 126 287 F 162 95.06 1395 reject_low 8 ALIGNMENT 0 YS2-6d04.q1k vc_4 351 384 287 286 F 34 0.00 1395 reject_low 8 ALIGNMENT 0 YS2-6d04.q1k chr04 384 149 719146 719145 C 236 0.00 1395 accept 3 ALIGNMENT 0 YS2-6d04.q1k vc_4 190 189 5872 6353 F 0 0.00 1395 reject_low 9 ALIGNMENT 36 YS2-6d04.q1k vc_1 189 149 2472 2511 C 41 97.56 1395 reject_low 11 ALIGNMENT 0 YS2-6d04.q1k vc_1 384 190 2473 2472 C 195 0.00 1395 reject_low 11 ALIGNMENT 347 YS2-6d04.q1k vc_2 189 625 2164 2602 F 437 93.59 1395 reject_low 5 ALIGNMENT 34 YS2-6d04.q1k vc_7 151 189 13525 13562 F 39 97.44 1395 reject_low 15 ALIGNMENT 97 YS2-6d04.q1k chr04 148 41 719145 719253 C 108 97.22 1395 accept 3 ALIGNMENT 36 YS2-6d04.q1k vc_2 189 149 2105 2144 C 41 97.56 1395 reject_low 12 ALIGNMENT 0 YS2-6d04.q1k vc_7 398 319 5173 5172 C 80 0.00 1395 reject_low 7 ALIGNMENT 20 YS2-6d05.q1k vc_4 514 578 133 193 F 65 81.54 1448 reject_low 4 ALIGNMENT 0 YS2-6d05.p1k chr04 442 463 1454335 1454334 F 22 0.00 463 reject_low 2 ALIGNMENT 20 YS2-6d05.q1k vc_4 578 514 1467 1527 C 65 81.54 1448 reject_low 5 ALIGNMENT 24 YS2-6d05.q1k vc_4 712 514 5621 5805 C 199 75.88 1448 reject_low 3 ALIGNMENT 0 YS2-6d05.p1k chr12 463 449 515371 515370 C 15 0.00 463 accept_chi 1 ALIGNMENT 366 YS2-6d05.p1k chr12 448 73 515370 515745 C 376 99.20 463 accept_chi 1 ALIGNMENT 171 YS2-6d05.p1k chr04 78 441 1453972 1454335 F 364 82.42 463 reject_low 2 ALIGNMENT 265 YS2-6d05.q1k chr12 40 455 515370 515780 F 416 89.18 1448 accept_chi 0 ALIGNMENT 20 YS2-6d05.q1k vc_4 514 578 6360 6420 F 65 81.54 1448 reject_low 6 ALIGNMENT 442 YS2-6d06.q1k chr05 44 660 275213 275832 F 617 91.09 1344 accept 0 ALIGNMENT 1043 YS2-6d06.p1k chr05 1274 38 280029 281263 C 1237 95.47 1394 accept 0 ALIGNMENT 985 YS2-6d07.p1k chr05 40 1221 143245 144440 F 1182 95.77 1310 accept 0 ALIGNMENT 563 YS2-6d07.q1k chr05 767 3 144210 144966 C 765 92.68 1248 accept 0 ALIGNMENT 945 YS2-6d09.p1k chr14 83 1241 135738 136907 F 1159 95.25 1336 accept 0 ALIGNMENT 22 YS2-6d09.p1k chr12 262 217 829405 829450 C 46 91.30 1336 reject_low 2 ALIGNMENT 0 YS2-6d09.p1k chr12 893 263 829406 829405 C 631 0.00 1336 reject_low 2 ALIGNMENT 512 YS2-6d09.q1k chr14 751 44 138328 139027 C 708 92.23 1360 accept 0 ALIGNMENT 23 YS2-6d09.p1k chr03 222 265 247928 247971 F 44 93.18 1336 reject_low 1 ALIGNMENT 0 YS2-6d09.p1k chr03 266 893 247971 247970 F 628 0.00 1336 reject_low 1 ALIGNMENT 0 YS2-6d09.p1k chr12 216 92 829451 829450 C 125 0.00 1336 reject_low 2 ALIGNMENT 0 YS2-6d09.p1k chr03 92 221 247928 247927 F 130 0.00 1336 reject_low 1 ALIGNMENT 746 YS2-6d10.p1k chr01 74 1114 53424 54463 F 1041 91.45 1349 accept 0 ALIGNMENT 994 YS2-6d11.p1k chr14 33 1158 654176 655309 F 1126 97.07 1341 accept 0 ALIGNMENT 611 YS2-6d11.q1k chr14 812 27 654652 655434 C 786 93.89 1363 accept 0 ALIGNMENT 958 YS2-6d13.p1k chr11 74 1216 51115 52260 F 1143 96.50 1364 accept 0 ALIGNMENT 511 YS2-6d14.q1k chr02 814 48 678749 679513 C 767 90.35 1365 accept 0 ALIGNMENT 967 YS2-6d14.p1k chr02 35 1246 675338 676548 F 1212 94.55 1361 accept 0 ALIGNMENT 953 YS2-6d15.p1k chr07 78 1150 588450 589532 F 1073 97.30 1305 accept 0 ALIGNMENT 624 YS2-6d15.q1k chr07 756 25 589993 590720 C 732 96.04 1392 accept 0 ALIGNMENT 922 YS2-6d16.p1k chr02 1145 76 799076 800154 C 1070 97.10 1311 accept 0 ALIGNMENT 602 YS2-6d16.q1k chr02 48 728 798315 798994 F 681 97.06 1463 accept 0 ALIGNMENT 0 YS2-6d20.p1k chr13 489 77 588671 588670 C 413 0.00 1272 reject_low 2 ALIGNMENT 0 YS2-6d20.p1k chr02 77 485 505195 505194 F 409 0.00 1272 reject_low 1 ALIGNMENT 0 YS2-6d20.p1k chr02 525 801 780423 780422 F 277 0.00 1272 reject_low 3 ALIGNMENT 21 YS2-6d20.p1k chr02 490 524 780389 780423 F 35 97.14 1272 reject_low 3 ALIGNMENT 0 YS2-6d20.p1k chr02 77 489 780389 780388 F 413 0.00 1272 reject_low 3 ALIGNMENT 21 YS2-6d20.p1k chr13 525 490 588635 588670 C 36 97.22 1272 reject_low 2 ALIGNMENT 22 YS2-6d20.p1k chr02 486 525 505195 505234 F 40 92.50 1272 reject_low 1 ALIGNMENT 0 YS2-6d20.p1k chr13 801 526 588636 588635 C 276 0.00 1272 reject_low 2 ALIGNMENT 863 YS2-6d20.p1k chr16 1063 70 605827 606826 C 994 96.98 1272 accept 0 ALIGNMENT 0 YS2-6d20.p1k chr02 526 801 505234 505233 F 276 0.00 1272 reject_low 1 ALIGNMENT 968 YS2-6d22.p1k chr01 66 1206 115539 116683 F 1141 95.88 1325 accept 0 ALIGNMENT 426 YS2-6d22.q1k chr01 640 33 118986 119591 C 608 90.79 1308 accept 0 ALIGNMENT 0 YS2-6d23.p1k chrm 77 461 35804 35803 F 385 0.00 1217 reject_low 3 ALIGNMENT 21 YS2-6d23.p1k chr09 67 135 105758 105826 F 69 92.75 1217 reject_low 5 ALIGNMENT 0 YS2-6d23.p1k chrm 831 77 67046 67045 C 755 0.00 1217 reject_low 7 ALIGNMENT 0 YS2-6d23.p1k chrm 522 841 81459 81458 F 320 0.00 1217 reject_low 6 ALIGNMENT 0 YS2-6d23.p1k chrm 77 833 81334 81333 F 757 0.00 1217 reject_low 8 ALIGNMENT 22 YS2-6d23.p1k chrm 841 886 50769 50818 F 46 82.61 1217 reject_low 9 ALIGNMENT 0 YS2-6d23.p1k chrm 542 841 35011 35010 F 300 0.00 1217 reject_low 1 ALIGNMENT 29 YS2-6d23.p1k chr13 178 73 86951 87056 C 106 91.51 1217 reject_low 2 ALIGNMENT 0 YS2-6d23.p1k chrm 525 841 35867 35866 F 317 0.00 1217 reject_low 3 ALIGNMENT 796 YS2-6d23.p1k chrm 91 1177 49738 50834 F 1087 95.95 1217 accept 0 ALIGNMENT 0 YS2-6d23.p1k chrm 878 509 50628 57026 C 370 0.00 1217 reject_low 10 ALIGNMENT 32 YS2-6d23.p1k chrm 834 889 81334 81391 F 56 85.71 1217 reject_low 8 ALIGNMENT 0 YS2-6d23.p1k chrm 449 77 57086 57085 C 373 0.00 1217 reject_low 10 ALIGNMENT 24 YS2-6d23.p1k chrm 940 879 50567 50627 C 62 85.48 1217 reject_low 10 ALIGNMENT 0 YS2-6d23.p1k chr13 841 179 86952 86951 C 663 0.00 1217 reject_low 2 ALIGNMENT 44 YS2-6d23.p1k chrm 462 524 35804 35867 F 63 92.06 1217 reject_low 3 ALIGNMENT 0 YS2-6d23.p1k chr09 136 841 105826 105825 F 706 0.00 1217 reject_low 5 ALIGNMENT 64 YS2-6d23.p1k chrm 445 541 34916 35011 F 97 91.75 1217 reject_low 1 ALIGNMENT 46 YS2-6d23.p1k chrm 508 450 57027 57085 C 59 94.92 1217 reject_low 10 ALIGNMENT 44 YS2-6d23.p1k chrm 907 841 57796 57860 C 67 89.55 1217 reject_low 4 ALIGNMENT 38 YS2-6d23.p1k chrm 909 832 66968 67045 C 78 84.62 1217 reject_low 7 ALIGNMENT 42 YS2-6d23.p1k chrm 464 521 81404 81459 F 58 94.83 1217 reject_low 6 ALIGNMENT 0 YS2-6d23.p1k chrm 840 77 57861 57860 C 764 0.00 1217 reject_low 4 ALIGNMENT 0 YS2-6d23.p1k chrm 77 463 81404 81403 F 387 0.00 1217 reject_low 6 ALIGNMENT 0 YS2-6d23.p1k chrm 77 444 34916 34915 F 368 0.00 1217 reject_low 1 ALIGNMENT 0 YS2-6d23.p1k chrm 77 840 50769 50768 F 764 0.00 1217 reject_low 9 ALIGNMENT 30 YS2-6d24.q1k vc_4 664 605 49 107 C 60 85.00 1364 reject_low 18 ALIGNMENT 36 YS2-6d24.q1k vc_5 198 163 1 36 C 36 100.00 1364 reject_low 16 ALIGNMENT 339 YS2-6d24.q1k vc_3 205 664 2534 2989 F 460 92.17 1364 reject_vc 5 ALIGNMENT 0 YS2-6d24.q1k vc_4 200 204 5870 6355 F 5 0.00 1364 reject_low 9 ALIGNMENT 47 YS2-6d24.q1k vc_7 414 363 6360 6411 C 52 98.08 1364|1,0 reject_low 8 ALIGNMENT 41 YS2-6d24.q1k vc_4 159 199 5829 5869 F 41 100.00 1364 reject_low 9 ALIGNMENT 36 YS2-6d24.q1k vc_7 164 199 13525 13560 F 36 100.00 1364 reject_low 15 ALIGNMENT 37 YS2-6d24.q1k vc_5 199 163 5027 5063 C 37 100.00 1364 reject_low 14 ALIGNMENT 154 YS2-6d24.q1k vc_7 664 413 4924 5172 C 252 88.10 1364|0,1 reject_low 8 ALIGNMENT 347 YS2-6d24.q1k vc_5 205 677 2401 2868 F 473 92.18 1364 reject_vc 1 ALIGNMENT 58 YS2-6d24.q1k chr12 68 158 456317 456402 F 91 91.21 1364 accept 6 ALIGNMENT 339 YS2-6d24.q1k vc_1 205 664 2534 2989 F 460 92.17 1364 reject_vc 3 ALIGNMENT 41 YS2-6d24.q1k vc_2 199 159 2107 2147 C 41 100.00 1364 reject_low 11 ALIGNMENT 30 YS2-6d24.q1k vc_4 605 664 1553 1611 F 60 85.00 1364 reject_low 13 ALIGNMENT 138 YS2-6d24.q1k vc_4 205 364 6356 6514 F 160 96.25 1364 reject_low 9 ALIGNMENT 339 YS2-6d24.q1k vc_2 205 664 2167 2622 F 460 92.17 1364 reject_vc 4 ALIGNMENT 0 YS2-6d24.q1k vc_7 413 414 5172 6360 C 0 0.00 1364 reject_low 8 ALIGNMENT 341 YS2-6d24.q1k vc_4 677 205 5340 5809 C 473 91.75 1364 reject_vc 2 ALIGNMENT 79 YS2-6d24.q1k vc_4 289 205 1448 1531 C 85 98.82 1364 reject_low 18 ALIGNMENT 41 YS2-6d24.q1k vc_1 199 159 2474 2514 C 41 100.00 1364 reject_low 10 ALIGNMENT 58 YS2-6d24.q1k chr12 68 158 465454 465539 F 91 91.21 1364 accept 7 ALIGNMENT 348 YS2-6d24.q1k vc_7 677 205 2257 2724 C 473 92.18 1364 reject_vc 0 ALIGNMENT 30 YS2-6d24.q1k vc_4 664 605 6276 6334 C 60 85.00 1364 reject_low 17 ALIGNMENT 0 YS2-6d24.q1k vc_4 604 290 108 1447 C 315 0.00 1364 reject_low 18 ALIGNMENT 138 YS2-6d24.q1k vc_4 205 364 129 287 F 160 96.25 1364 reject_low 13 ALIGNMENT 41 YS2-6d24.q1k vc_3 199 159 2474 2514 C 41 100.00 1364 reject_low 12 ALIGNMENT 0 YS2-6d24.q1k vc_4 365 604 288 1552 F 240 0.00 1364 reject_low 13 ALIGNMENT 479 YS2-6e02.q1k chr04 587 34 1141166 1141719 C 554 96.57 1392 accept_chi 1 ALIGNMENT 508 YS2-6e02.p1k chr04 74 595 1141198 1141719 F 522 100.00 614 accept_chi 0 ALIGNMENT 0 YS2-6e02.p1k chr04 596 614 1141719 1141718 F 19 0.00 614 accept_chi 0 ALIGNMENT 869 YS2-6e03.p1k chr12 1159 77 859398 860486 C 1083 94.55 1407 accept 0 ALIGNMENT 448 YS2-6e03.q1k chr12 31 830 857294 858085 F 800 87.38 1386 accept 0 ALIGNMENT 924 YS2-6e04.p1k chr11 1168 69 494950 496052 C 1100 96.00 1392 accept 0 ALIGNMENT 661 YS2-6e04.q1k chr11 26 841 492081 492899 F 816 94.49 1358 accept 0 ALIGNMENT 0 YS2-6e06.q1k vc_4 124 345 5831 5830 F 222 0.00 1595 reject_low 14 ALIGNMENT 277 YS2-6e06.q1k vc_5 387 790 2399 2800 F 404 90.59 1595 reject_vc 2 ALIGNMENT 0 YS2-6e06.q1k vc_7 124 348 63 62 F 225 0.00 1595 reject_low 21 ALIGNMENT 257 YS2-6e06.q1k chr12 33 346 467978 468287 F 314 96.50 1595 accept 1 ALIGNMENT 0 YS2-6e06.q1k vc_4 386 124 1534 1533 C 263 0.00 1595 reject_low 16 ALIGNMENT 0 YS2-6e06.q1k vc_7 386 534 13561 13560 F 149 0.00 1595 reject_low 22 ALIGNMENT 0 YS2-6e06.q1k vc_5 347 124 37 36 C 224 0.00 1595 reject_low 23 ALIGNMENT 277 YS2-6e06.q1k vc_1 387 790 2532 2933 F 404 90.59 1595 reject_low 9 ALIGNMENT 0 YS2-6e06.q1k vc_1 345 124 2513 2512 C 222 0.00 1595 reject_low 17 ALIGNMENT 0 YS2-6e06.q1k vc_5 347 124 5064 5063 C 224 0.00 1595 reject_low 20 ALIGNMENT 78 YS2-6e06.q1k vc_4 472 387 1448 1533 C 86 97.67 1595 reject_low 16 ALIGNMENT 324 YS2-6e06.p1k vc_3 481 1 1264 1749 C 481 90.02 673 reject_low 6 ALIGNMENT 324 YS2-6e06.p1k vc_2 481 1 1264 1749 C 481 90.02 673 reject_low 5 ALIGNMENT 146 YS2-6e06.q1k vc_4 387 547 127 287 F 161 97.52 1595 reject_low 13 ALIGNMENT 0 YS2-6e06.q1k chr12 347 534 468287 468286 F 188 0.00 1595 accept 1 ALIGNMENT 0 YS2-6e06.q1k vc_5 124 386 2399 2398 F 263 0.00 1595 reject_vc 2 ALIGNMENT 0 YS2-6e06.q1k vc_4 534 473 1449 1448 C 62 0.00 1595 reject_low 16 ALIGNMENT 37 YS2-6e06.q1k vc_7 349 385 13525 13561 F 37 100.00 1595 reject_low 22 ALIGNMENT 0 YS2-6e06.q1k vc_3 534 386 2474 2473 C 149 0.00 1595 reject_low 19 ALIGNMENT 324 YS2-6e06.p1k vc_5 481 1 4184 4669 C 481 90.02 673 reject_vc 2 ALIGNMENT 0 YS2-6e06.q1k chr12 347 534 459150 459149 F 188 0.00 1595 accept 0 ALIGNMENT 0 YS2-6e06.q1k vc_7 386 124 2727 2726 C 263 0.00 1595 reject_low 3 ALIGNMENT 40 YS2-6e06.q1k vc_2 385 346 2106 2145 C 40 100.00 1595 reject_low 18 ALIGNMENT 324 YS2-6e06.p1k vc_6 1 481 3712 4197 F 481 90.02 673 reject_low 7 ALIGNMENT 0 YS2-6e06.q1k vc_4 386 386 5871 6353 F 1 0.00 1595 reject_low 14 ALIGNMENT 36 YS2-6e06.q1k vc_5 383 348 1 36 C 36 100.00 1595 reject_low 23 ALIGNMENT 0 YS2-6e06.q1k vc_1 534 386 2474 2473 C 149 0.00 1595 reject_low 17 ALIGNMENT 0 YS2-6e06.q1k vc_7 124 348 13525 13524 F 225 0.00 1595 reject_low 22 ALIGNMENT 0 YS2-6e06.q1k vc_7 386 534 99 98 F 149 0.00 1595 reject_low 21 ALIGNMENT 0 YS2-6e06.q1k vc_3 124 386 2532 2531 F 263 0.00 1595 reject_low 11 ALIGNMENT 0 YS2-6e06.q1k vc_5 534 386 5027 5026 C 149 0.00 1595 reject_low 20 ALIGNMENT 40 YS2-6e06.q1k vc_3 385 346 2473 2512 C 40 100.00 1595 reject_low 19 ALIGNMENT 0 YS2-6e06.q1k vc_1 124 386 2532 2531 F 263 0.00 1595 reject_low 9 ALIGNMENT 48 YS2-6e06.q1k vc_7 597 546 6360 6411 C 52 98.08 1595|1,0 reject_low 15 ALIGNMENT 277 YS2-6e06.q1k vc_3 387 790 2532 2933 F 404 90.59 1595 reject_low 11 ALIGNMENT 0 YS2-6e06.q1k vc_7 596 597 5172 6360 C 0 0.00 1595 reject_low 15 ALIGNMENT 318 YS2-6e06.p1k vc_7 1 481 456 941 F 481 89.60 673 reject_low 3 ALIGNMENT 0 YS2-6e06.q1k vc_4 386 124 5812 5811 C 263 0.00 1595 reject_low 12 ALIGNMENT 277 YS2-6e06.q1k vc_7 790 387 2325 2726 C 404 90.59 1595 reject_low 3 ALIGNMENT 0 YS2-6e06.q1k vc_7 545 124 6412 6411 C 422 0.00 1595 reject_low 15 ALIGNMENT 83 YS2-6e06.q1k vc_7 790 596 4980 5172 C 195 82.56 1595|0,1 reject_low 15 ALIGNMENT 257 YS2-6e06.q1k chr12 33 346 458841 459150 F 314 96.50 1595 accept 0 ALIGNMENT 40 YS2-6e06.q1k vc_1 385 346 2473 2512 C 40 100.00 1595 reject_low 17 ALIGNMENT 0 YS2-6e06.q1k vc_2 345 124 2146 2145 C 222 0.00 1595 reject_low 18 ALIGNMENT 318 YS2-6e06.p1k vc_7 1 481 13918 14403 F 481 89.60 673 reject_low 8 ALIGNMENT 0 YS2-6e06.q1k vc_2 124 386 2165 2164 F 263 0.00 1595 reject_low 10 ALIGNMENT 38 YS2-6e06.q1k vc_5 385 348 5026 5063 C 38 100.00 1595 reject_low 20 ALIGNMENT 146 YS2-6e06.q1k vc_4 387 547 6354 6514 F 161 97.52 1595 reject_low 14 ALIGNMENT 40 YS2-6e06.q1k vc_4 346 385 5831 5870 F 40 100.00 1595 reject_low 14 ALIGNMENT 0 YS2-6e06.q1k vc_2 534 386 2107 2106 C 149 0.00 1595 reject_low 18 ALIGNMENT 0 YS2-6e06.q1k vc_4 124 386 127 126 F 263 0.00 1595 reject_low 13 ALIGNMENT 0 YS2-6e06.q1k vc_5 534 384 2 1 C 151 0.00 1595 reject_low 23 ALIGNMENT 277 YS2-6e06.q1k vc_2 387 790 2165 2566 F 404 90.59 1595 reject_low 10 ALIGNMENT 270 YS2-6e06.q1k vc_4 790 387 5408 5811 C 404 90.10 1595 reject_low 12 ALIGNMENT 0 YS2-6e06.q1k vc_3 345 124 2513 2512 C 222 0.00 1595 reject_low 19 ALIGNMENT 324 YS2-6e06.p1k vc_1 481 1 1264 1749 C 481 90.02 673 reject_low 4 ALIGNMENT 37 YS2-6e06.q1k vc_7 349 385 63 99 F 37 100.00 1595 reject_low 21 ALIGNMENT 218 YS2-6e07.p1k chrm 64 352 22942 23231 F 289 99.31 371 accept 0 ALIGNMENT 0 YS2-6e07.p1k chrm 353 371 23231 23230 F 19 0.00 371 accept 0 ALIGNMENT 0 YS2-6e08.q1k vc_3 209 62 2513 2512 C 148 0.00 1318 reject_low 14 ALIGNMENT 0 YS2-6e08.q1k vc_1 272 251 2473 2472 C 22 0.00 1318 reject_low 12 ALIGNMENT 41 YS2-6e08.q1k vc_2 250 210 2105 2145 C 41 100.00 1318 reject_low 13 ALIGNMENT 0 YS2-6e08.q1k vc_2 209 62 2146 2145 C 148 0.00 1318 reject_low 13 ALIGNMENT 0 YS2-6e08.q1k vc_7 251 272 13562 13561 F 22 0.00 1318 reject_low 16 ALIGNMENT 0 YS2-6e08.q1k vc_1 209 62 2513 2512 C 148 0.00 1318 reject_low 12 ALIGNMENT 283 YS2-6e08.q1k vc_1 250 697 2531 2974 F 448 88.62 1318 reject_vc 2 ALIGNMENT 0 YS2-6e08.q1k vc_7 249 62 2728 2727 C 188 0.00 1318 reject_vc 6 ALIGNMENT 0 YS2-6e08.q1k vc_5 272 248 2 1 C 25 0.00 1318 reject_low 15 ALIGNMENT 283 YS2-6e08.q1k vc_2 250 697 2164 2607 F 448 88.62 1318 reject_vc 3 ALIGNMENT 0 YS2-6e08.q1k chr09 272 210 324046 324045 C 63 0.00 1318 accept_chi 1 ALIGNMENT 148 YS2-6e08.q1k vc_4 250 411 6353 6514 F 162 97.53 1318|1,0 reject_low 9 ALIGNMENT 0 YS2-6e08.q1k vc_5 204 62 5071 5070 C 143 0.00 1318 reject_low 11 ALIGNMENT 0 YS2-6e08.q1k vc_4 251 250 5872 6353 F 0 0.00 1318 reject_low 9 ALIGNMENT 37 YS2-6e08.q1k vc_5 247 205 1 43 C 43 95.35 1318 reject_low 15 ALIGNMENT 41 YS2-6e08.q1k vc_3 250 210 2472 2512 C 41 100.00 1318 reject_low 14 ALIGNMENT 0 YS2-6e08.q1k vc_4 249 62 5813 5812 C 188 0.00 1318 reject_vc 7 ALIGNMENT 283 YS2-6e08.q1k vc_7 697 250 2284 2727 C 448 88.62 1318 reject_vc 6 ALIGNMENT 40 YS2-6e08.q1k vc_5 250 205 5025 5070 C 46 95.65 1318 reject_low 11 ALIGNMENT 0 YS2-6e08.q1k vc_4 62 249 126 125 F 188 0.00 1318 reject_low 8 ALIGNMENT 41 YS2-6e08.q1k vc_4 210 250 5831 5871 F 41 100.00 1318 reject_low 9 ALIGNMENT 184 YS2-6e08.p1k chr09 69 275 324085 324291 F 207 99.52 294 accept_chi 0 ALIGNMENT 0 YS2-6e08.q1k vc_5 272 251 5026 5025 C 22 0.00 1318 reject_low 11 ALIGNMENT 84 YS2-6e08.q1k vc_4 338 250 1446 1534 C 89 98.88 1318 reject_low 10 ALIGNMENT 0 YS2-6e08.q1k vc_7 62 212 13525 13524 F 151 0.00 1318 reject_low 16 ALIGNMENT 0 YS2-6e08.q1k vc_3 272 251 2473 2472 C 22 0.00 1318 reject_low 14 ALIGNMENT 148 YS2-6e08.q1k vc_4 250 411 126 287 F 162 97.53 1318 reject_low 8 ALIGNMENT 171 YS2-6e08.q1k chr09 209 7 324045 324247 C 203 97.04 1318 accept_chi 1 ALIGNMENT 0 YS2-6e08.q1k vc_4 62 209 5831 5830 F 148 0.00 1318 reject_low 9 ALIGNMENT 283 YS2-6e08.q1k vc_5 250 697 2398 2841 F 448 88.62 1318 reject_vc 5 ALIGNMENT 0 YS2-6e08.q1k vc_4 249 62 1535 1534 C 188 0.00 1318 reject_low 10 ALIGNMENT 0 YS2-6e08.p1k chr09 276 294 324291 324290 F 19 0.00 294 accept_chi 0 ALIGNMENT 0 YS2-6e08.q1k vc_5 62 249 2398 2397 F 188 0.00 1318 reject_vc 5 ALIGNMENT 276 YS2-6e08.q1k vc_4 697 250 5367 5812 C 448 88.17 1318 reject_vc 7 ALIGNMENT 41 YS2-6e08.q1k vc_1 250 210 2472 2512 C 41 100.00 1318 reject_low 12 ALIGNMENT 0 YS2-6e08.q1k vc_2 62 249 2164 2163 F 188 0.00 1318 reject_vc 3 ALIGNMENT 0 YS2-6e08.q1k vc_3 62 249 2531 2530 F 188 0.00 1318 reject_vc 4 ALIGNMENT 0 YS2-6e08.q1k vc_2 272 251 2106 2105 C 22 0.00 1318 reject_low 13 ALIGNMENT 0 YS2-6e08.q1k vc_1 62 249 2531 2530 F 188 0.00 1318 reject_vc 2 ALIGNMENT 0 YS2-6e08.q1k vc_5 204 62 44 43 C 143 0.00 1318 reject_low 15 ALIGNMENT 283 YS2-6e08.q1k vc_3 250 697 2531 2974 F 448 88.62 1318 reject_vc 4 ALIGNMENT 38 YS2-6e08.q1k vc_7 213 250 13525 13562 F 38 100.00 1318 reject_low 16 ALIGNMENT 0 YS2-6e10.p1k chr03 77 634 307349 307348 F 558 0.00 1350 reject_low 9 ALIGNMENT 0 YS2-6e10.p1k chr12 77 711 1062547 1062546 F 635 0.00 1350 reject_low 10 ALIGNMENT 237 YS2-6e10.p1k chr08 1125 677 12237 12696 C 449 84.41 1350 reject_low 5 ALIGNMENT 26 YS2-6e10.q1k chr05 358 323 566910 566945 C 36 91.67 1589 reject_low 15 ALIGNMENT 69 YS2-6e10.q1k chr03 360 536 4132 4321 F 177 81.36 1589 reject_low 12 ALIGNMENT 213 YS2-6e10.p1k chr11 1125 615 2136 2646 C 511 81.21 1350 reject_low 7 ALIGNMENT 981 YS2-6e10.p1k chr15 35 1145 1081788 1082903 F 1111 96.76 1350 ambiguous_tel 0 ALIGNMENT 0 YS2-6e10.p1k chr02 636 554 8415 8498 C 83 0.00 1350 reject_low 17 ALIGNMENT 0 YS2-6e10.q1k chr15 135 62 1083946 1083945 C 74 0.00 1589 ambiguous_tel 0 ALIGNMENT 28 YS2-6e10.q1k chr03 505 536 292131 292162 F 32 96.88 1589 reject_low 23 ALIGNMENT 184 YS2-6e10.p1k chr03 635 1128 307349 307846 F 494 80.16 1350 reject_low 9 ALIGNMENT 0 YS2-6e10.p1k chr09 77 614 433461 433460 F 538 0.00 1350 reject_low 6 ALIGNMENT 0 YS2-6e10.q1k chr05 322 62 566946 566945 C 261 0.00 1589 reject_low 15 ALIGNMENT 0 YS2-6e10.q1k chr07 62 148 767 766 F 87 0.00 1589 reject_low 13 ALIGNMENT 0 YS2-6e10.q1k chr15 588 217 1083866 1083865 C 372 0.00 1589 ambiguous_tel 0 ALIGNMENT 229 YS2-6e10.p1k chr09 1125 615 9109 9620 C 511 82.00 1350 reject_low 3 ALIGNMENT 69 YS2-6e10.q1k chr11 355 536 665111 665305 F 182 80.77 1589 reject_low 11 ALIGNMENT 0 YS2-6e10.q1k chr02 217 588 6660 6659 F 372 0.00 1589 reject_low 17 ALIGNMENT 174 YS2-6e10.p1k chr02 1125 637 7922 8414 C 489 79.55 1350 reject_low 17 ALIGNMENT 0 YS2-6e10.p1k chr15 700 77 12295 12294 C 624 0.00 1350 reject_low 14 ALIGNMENT 22 YS2-6e10.q1k chr02 192 216 6636 6660 F 25 100.00 1589 reject_low 17 ALIGNMENT 0 YS2-6e10.q1k chr05 359 359 566887 566909 C 1 0.00 1589 reject_low 15 ALIGNMENT 84 YS2-6e10.q1k chr05 536 360 566696 566886 C 177 84.18 1589 reject_low 15 ALIGNMENT 0 YS2-6e10.q1k chr08 443 62 8076 8075 C 382 0.00 1589 reject_low 22 ALIGNMENT 0 YS2-6e10.q1k chr03 441 443 292048 292060 F 3 0.00 1589 reject_low 23 ALIGNMENT 0 YS2-6e10.q1k chr03 62 378 291983 291982 F 317 0.00 1589 reject_low 23 ALIGNMENT 33 YS2-6e10.q1k chr15 216 136 1083865 1083945 C 81 82.72 1589 ambiguous_tel 0 ALIGNMENT 182 YS2-6e10.p1k chr12 1125 640 13399 13887 C 486 80.04 1350 reject_low 20 ALIGNMENT 26 YS2-6e10.q1k chr07 322 364 862 904 F 43 88.37 1589 reject_low 13 ALIGNMENT 50 YS2-6e10.p1k chr02 1048 1125 809019 809097 F 78 89.74 1350 reject_low 18 ALIGNMENT 0 YS2-6e10.q1k chr08 483 474 8047 8045 C 10 0.00 1589 reject_low 22 ALIGNMENT 23 YS2-6e10.p1k chr02 553 523 8499 8529 C 31 93.55 1350 reject_low 17 ALIGNMENT 0 YS2-6e10.q1k chr11 62 354 665111 665110 F 293 0.00 1589 reject_low 11 ALIGNMENT 0 YS2-6e10.p1k chr07 77 1047 1080280 1080279 F 971 0.00 1350 reject_low 19 ALIGNMENT 155 YS2-6e10.p1k chr15 1125 701 11864 12294 C 425 79.76 1350 reject_low 14 ALIGNMENT 0 YS2-6e10.p1k chr14 77 614 781452 781451 F 538 0.00 1350 reject_low 8 ALIGNMENT 44 YS2-6e10.q1k chr05 452 535 568934 569017 F 84 85.71 1589 reject_low 16 ALIGNMENT 0 YS2-6e10.q1k chr07 218 321 836 861 F 104 0.00 1589 reject_low 13 ALIGNMENT 23 YS2-6e10.q1k chr08 473 444 8046 8075 C 30 96.67 1589 reject_low 22 ALIGNMENT 216 YS2-6e10.p1k chr09 615 1125 433461 433971 F 511 81.60 1350 reject_low 6 ALIGNMENT 191 YS2-6e10.p1k chr12 712 1125 1062547 1062962 F 414 82.13 1350 reject_low 10 ALIGNMENT 0 YS2-6e10.p1k chr08 676 77 12697 12696 C 600 0.00 1350 reject_low 5 ALIGNMENT 0 YS2-6e10.p1k chr07 639 77 7091 7090 C 563 0.00 1350 reject_low 13 ALIGNMENT 0 YS2-6e10.q1k chr07 365 365 905 894 F 1 0.00 1589 reject_low 13 ALIGNMENT 45 YS2-6e10.q1k chr03 444 495 292061 292112 F 52 98.08 1589 reject_low 23 ALIGNMENT 50 YS2-6e10.p1k chr07 1048 1125 1080280 1080358 F 78 89.74 1350 reject_low 19 ALIGNMENT 0 YS2-6e10.q1k chr05 536 588 569017 569016 F 53 0.00 1589 reject_low 16 ALIGNMENT 0 YS2-6e10.q1k chr11 537 588 665305 665304 F 52 0.00 1589 reject_low 11 ALIGNMENT 192 YS2-6e10.p1k chr01 1125 636 2123 2610 C 490 80.41 1350 reject_low 21 ALIGNMENT 207 YS2-6e10.p1k chr07 1125 640 6606 7090 C 486 81.48 1350 reject_low 13 ALIGNMENT 0 YS2-6e10.q1k chr05 588 537 566697 566696 C 52 0.00 1589 reject_low 15 ALIGNMENT 0 YS2-6e10.p1k chr01 635 553 2611 2682 C 83 0.00 1350 reject_low 21 ALIGNMENT 0 YS2-6e10.q1k chr03 496 504 292113 292130 F 9 0.00 1589 reject_low 23 ALIGNMENT 0 YS2-6e10.p1k chr02 522 77 8530 8529 C 446 0.00 1350 reject_low 17 ALIGNMENT 0 YS2-6e10.p1k chr12 639 566 13888 13965 C 74 0.00 1350 reject_low 20 ALIGNMENT 0 YS2-6e10.q1k chr03 537 588 292162 292161 F 52 0.00 1589 reject_low 23 ALIGNMENT 28 YS2-6e10.p1k chr12 565 515 13966 14016 C 51 88.24 1350 reject_low 20 ALIGNMENT 0 YS2-6e10.q1k chr08 588 537 7995 7994 C 52 0.00 1589 reject_low 22 ALIGNMENT 981 YS2-6e10.p1k chr16 1145 35 8238 9353 C 1111 96.76 1350 reject_low 2 ALIGNMENT 915 YS2-6e10.p1k chr13 35 1211 921596 922786 F 1177 93.71 1350 ambiguous_tel 1 ALIGNMENT 23 YS2-6e10.p1k chr01 552 519 2683 2716 C 34 91.18 1350 reject_low 21 ALIGNMENT 26 YS2-6e10.q1k chr03 379 440 291983 292047 F 62 82.26 1589 reject_low 23 ALIGNMENT 38 YS2-6e10.q1k chr08 536 484 7994 8046 C 53 92.45 1589 reject_low 22 ALIGNMENT 0 YS2-6e10.p1k chr11 614 77 2647 2646 C 538 0.00 1350 reject_low 7 ALIGNMENT 202 YS2-6e10.p1k chr14 615 1125 781452 781964 F 511 81.02 1350 reject_low 8 ALIGNMENT 63 YS2-6e10.q1k chr07 366 536 895 1078 F 171 81.29 1589 reject_low 13 ALIGNMENT 0 YS2-6e10.p1k chr02 77 1047 809019 809018 F 971 0.00 1350 reject_low 18 ALIGNMENT 0 YS2-6e10.q1k chr02 62 191 6636 6635 F 130 0.00 1589 reject_low 17 ALIGNMENT 0 YS2-6e10.p1k chr12 514 77 14017 14016 C 438 0.00 1350 reject_low 20 ALIGNMENT 229 YS2-6e10.p1k chr10 1125 615 9092 9603 C 511 82.00 1350 reject_low 4 ALIGNMENT 29 YS2-6e10.q1k chr07 149 217 767 835 F 69 82.61 1589 reject_low 13 ALIGNMENT 0 YS2-6e10.p1k chr01 518 77 2717 2716 C 442 0.00 1350 reject_low 21 ALIGNMENT 0 YS2-6e10.q1k chr03 537 588 4321 4320 F 52 0.00 1589 reject_low 12 ALIGNMENT 0 YS2-6e10.q1k chr05 62 451 568934 568933 F 390 0.00 1589 reject_low 16 ALIGNMENT 0 YS2-6e10.q1k chr07 537 588 1078 1077 F 52 0.00 1589 reject_low 13 ALIGNMENT 0 YS2-6e10.p1k chr09 614 77 9621 9620 C 538 0.00 1350 reject_low 3 ALIGNMENT 0 YS2-6e10.q1k chr03 62 359 4132 4131 F 298 0.00 1589 reject_low 12 ALIGNMENT 0 YS2-6e10.p1k chr10 614 77 9604 9603 C 538 0.00 1350 reject_low 4 ALIGNMENT 0 YS2-6e11.p1k chr08 237 155 146315 146314 C 83 0.00 1268 reject_low 3 ALIGNMENT 0 YS2-6e11.p1k chr02 708 231 197718 197717 C 478 0.00 1268 reject_low 14 ALIGNMENT 57 YS2-6e11.p1k chr07 230 136 735987 736080 C 95 89.47 1268 reject_low 10 ALIGNMENT 60 YS2-6e11.p1k chr08 326 238 146223 146314 C 89 92.13 1268 reject_low 3 ALIGNMENT 0 YS2-6e11.p1k chr07 708 231 735988 735987 C 478 0.00 1268 reject_low 10 ALIGNMENT 57 YS2-6e11.p1k chr04 238 323 410370 410458 F 86 91.86 1268 reject_low 4 ALIGNMENT 0 YS2-6e11.p1k chr05 231 708 434967 434966 F 478 0.00 1268 reject_low 9 ALIGNMENT 0 YS2-6e11.p1k chr11 155 242 219539 219538 F 88 0.00 1268 reject_low 6 ALIGNMENT 0 YS2-6e11.p1k chr04 155 237 410370 410369 F 83 0.00 1268 reject_low 4 ALIGNMENT 0 YS2-6e11.p1k chr11 318 708 517706 517705 F 391 0.00 1268 reject_low 12 ALIGNMENT 40 YS2-6e11.p1k chr15 215 146 969001 969070 C 70 88.57 1268 reject_low 20 ALIGNMENT 0 YS2-6e11.p1k chr13 244 155 321219 321218 C 90 0.00 1268 reject_low 13 ALIGNMENT 0 YS2-6e11.p1k chr13 708 322 768361 768360 C 387 0.00 1268 reject_low 7 ALIGNMENT 0 YS2-6e11.p1k chr16 708 242 56279 56278 C 467 0.00 1268 reject_low 19 ALIGNMENT 0 YS2-6e11.p1k chr08 708 327 146224 146223 C 382 0.00 1268 reject_low 3 ALIGNMENT 51 YS2-6e11.p1k chr16 230 136 769317 769410 C 95 87.37 1268 reject_low 16 ALIGNMENT 0 YS2-6e11.p1k chr07 708 232 712210 712209 C 477 0.00 1268 reject_low 17 ALIGNMENT 57 YS2-6e11.p1k chr04 136 230 946196 946289 F 95 89.47 1268 reject_low 8 ALIGNMENT 0 YS2-6e11.p1k chr13 708 318 321143 321142 C 391 0.00 1268 reject_low 13 ALIGNMENT 0 YS2-6e11.p1k chr16 708 231 769318 769317 C 478 0.00 1268 reject_low 16 ALIGNMENT 48 YS2-6e11.p1k chr07 231 136 712209 712303 C 96 86.46 1268 reject_low 17 ALIGNMENT 48 YS2-6e11.p1k chr01 230 136 182614 182707 C 95 86.32 1268 reject_low 18 ALIGNMENT 62 YS2-6e11.p1k chr05 92 230 498371 498505 F 139 84.17 1268 reject_low 1 ALIGNMENT 0 YS2-6e11.p1k chr15 708 216 969002 969001 C 493 0.00 1268 reject_low 20 ALIGNMENT 53 YS2-6e11.p1k chr13 321 245 768360 768440 C 77 92.21 1268 reject_low 7 ALIGNMENT 57 YS2-6e11.p1k chr12 230 136 374000 374093 C 95 89.47 1268 reject_low 11 ALIGNMENT 0 YS2-6e11.p1k chr05 231 708 498505 498504 F 478 0.00 1268 reject_low 1 ALIGNMENT 0 YS2-6e11.p1k chr01 708 231 182615 182614 C 478 0.00 1268 reject_low 18 ALIGNMENT 56 YS2-6e11.p1k chr11 243 315 219539 219615 F 73 94.52 1268 reject_low 6 ALIGNMENT 52 YS2-6e11.p1k chr11 245 317 517630 517706 F 73 93.15 1268 reject_low 12 ALIGNMENT 0 YS2-6e11.p1k chr07 155 244 774354 774353 F 90 0.00 1268 reject_low 5 ALIGNMENT 40 YS2-6e11.p1k chr16 241 162 56278 56358 C 80 86.25 1268 reject_low 19 ALIGNMENT 0 YS2-6e11.p1k chr04 324 708 410458 410457 F 385 0.00 1268 reject_low 4 ALIGNMENT 0 YS2-6e11.p1k chr07 323 708 774435 774434 F 386 0.00 1268 reject_low 5 ALIGNMENT 54 YS2-6e11.p1k chr07 245 322 774354 774435 F 78 92.31 1268 reject_low 5 ALIGNMENT 52 YS2-6e11.p1k chr13 317 245 321142 321218 C 73 93.15 1268 reject_low 13 ALIGNMENT 57 YS2-6e11.p1k chr05 136 230 434874 434967 F 95 89.47 1268 reject_low 9 ALIGNMENT 0 YS2-6e11.p1k chr11 155 244 517630 517629 F 90 0.00 1268 reject_low 12 ALIGNMENT 633 YS2-6e11.p1k chr10 985 92 196526 197459 C 894 93.06 1268 accept 0 ALIGNMENT 54 YS2-6e11.p1k chr02 230 136 197717 197810 C 95 88.42 1268 reject_low 14 ALIGNMENT 72 YS2-6e11.p1k chr12 314 136 656935 657116 C 179 82.68 1268 reject_low 2 ALIGNMENT 0 YS2-6e11.p1k chr06 708 314 204913 204912 C 395 0.00 1268 reject_low 15 ALIGNMENT 0 YS2-6e11.p1k chr11 316 708 219615 219614 F 393 0.00 1268 reject_low 6 ALIGNMENT 0 YS2-6e11.p1k chr06 244 155 204985 204984 C 90 0.00 1268 reject_low 15 ALIGNMENT 0 YS2-6e11.p1k chr12 708 231 374001 374000 C 478 0.00 1268 reject_low 11 ALIGNMENT 0 YS2-6e11.p1k chr12 708 315 656936 656935 C 394 0.00 1268 reject_low 2 ALIGNMENT 0 YS2-6e11.p1k chr13 244 155 768441 768440 C 90 0.00 1268 reject_low 7 ALIGNMENT 51 YS2-6e11.p1k chr06 313 245 204912 204984 C 69 94.20 1268 reject_low 15 ALIGNMENT 0 YS2-6e11.p1k chr04 231 708 946289 946288 F 478 0.00 1268 reject_low 8 ALIGNMENT 712 YS2-6e12.q1k chr07 1 919 977917 978824 F 919 94.12 1238 accept 0 ALIGNMENT 860 YS2-6e12.p1k chr07 1093 35 981385 982456 C 1059 95.75 1281 accept 0 ALIGNMENT 578 YS2-6e13.q1k chr07 799 27 1008094 1008856 C 773 93.79 1369 accept 0 ALIGNMENT 971 YS2-6e13.p1k chr07 57 1261 1007244 1008451 F 1205 94.85 1331 accept 0 ALIGNMENT 329 YS2-6e16.q1k chr02 636 48 429519 430107 C 589 86.08 1417 reject_low 1 ALIGNMENT 266 YS2-6e16.q1k chr08 42 615 552930 553504 F 574 82.75 1417 reject_low 3 ALIGNMENT 1014 YS2-6e16.p1k chr02 76 1309 421922 423152 F 1234 95.87 1314 accept 0 ALIGNMENT 543 YS2-6e16.q1k chr02 728 42 427578 428264 C 687 93.74 1417 accept 0 ALIGNMENT 269 YS2-6e16.q1k chr01 42 615 226282 226856 F 574 82.93 1417 reject_low 2 ALIGNMENT 596 YS2-6e17.q1k chr15 895 35 310819 311682 C 861 91.06 1330 accept 0 ALIGNMENT 968 YS2-6e17.p1k chr15 72 1287 306815 308050 F 1216 94.24 1294 accept 0 ALIGNMENT 969 YS2-6e18.p1k chr11 66 1140 421127 422210 F 1075 97.95 1263 accept 0 ALIGNMENT 564 YS2-6e18.q1k chr11 714 17 425122 425819 C 698 94.41 1273 accept 0 ALIGNMENT 697 YS2-6e19.q1k chr13 853 33 681830 682648 C 821 95.86 1294 accept 0 ALIGNMENT 1024 YS2-6e19.p1k chr13 32 1173 677826 678974 F 1142 97.20 1318 accept 0 ALIGNMENT 330 YS2-6e20.q1k vc_3 454 911 2531 2987 F 458 91.27 1330 reject_low 5 ALIGNMENT 0 YS2-6e20.q1k vc_3 617 455 2473 2472 C 163 0.00 1330 reject_low 15 ALIGNMENT 0 YS2-6e20.q1k vc_4 453 62 5813 5812 C 392 0.00 1330 reject_low 8 ALIGNMENT 0 YS2-6e20.q1k vc_7 664 665 5172 6360 C 0 0.00 1330 reject_low 10 ALIGNMENT 363 YS2-6e20.q1k chr12 414 26 462224 462612 C 389 97.94 1330 accept 0 ALIGNMENT 38 YS2-6e20.q1k vc_7 417 454 63 100 F 38 100.00 1330 reject_low 17 ALIGNMENT 330 YS2-6e20.q1k vc_5 454 911 2398 2854 F 458 91.27 1330 reject_low 6 ALIGNMENT 0 YS2-6e20.q1k vc_2 414 62 2145 2144 C 353 0.00 1330 reject_low 14 ALIGNMENT 40 YS2-6e20.q1k vc_4 415 454 5832 5871 F 40 100.00 1330 reject_low 11 ALIGNMENT 0 YS2-6e20.q1k vc_5 617 455 5026 5025 C 163 0.00 1330 reject_low 16 ALIGNMENT 0 YS2-6e20.q1k vc_5 62 453 2398 2397 F 392 0.00 1330 reject_low 6 ALIGNMENT 0 YS2-6e20.q1k vc_2 62 453 2164 2163 F 392 0.00 1330 reject_low 4 ALIGNMENT 0 YS2-6e20.q1k vc_5 617 452 2 1 C 166 0.00 1330 reject_low 19 ALIGNMENT 323 YS2-6e20.q1k vc_4 911 454 5354 5812 C 458 90.61 1330 reject_low 8 ALIGNMENT 0 YS2-6e20.q1k vc_4 617 541 1449 1448 C 77 0.00 1330 reject_low 12 ALIGNMENT 0 YS2-6e20.q1k vc_2 617 455 2106 2105 C 163 0.00 1330 reject_low 14 ALIGNMENT 40 YS2-6e20.q1k vc_1 454 415 2472 2511 C 40 100.00 1330 reject_low 13 ALIGNMENT 0 YS2-6e20.q1k vc_1 617 455 2473 2472 C 163 0.00 1330 reject_low 13 ALIGNMENT 0 YS2-6e20.q1k chr12 617 415 453088 453087 C 203 0.00 1330 reject_low 2 ALIGNMENT 42 YS2-6e20.q1k vc_7 665 614 6360 6411 C 52 94.23 1330|1,0 reject_low 10 ALIGNMENT 145 YS2-6e20.q1k vc_4 454 615 126 287 F 162 96.91 1330 reject_low 9 ALIGNMENT 0 YS2-6e20.q1k vc_1 414 62 2512 2511 C 353 0.00 1330 reject_low 13 ALIGNMENT 0 YS2-6e20.q1k vc_7 613 62 6412 6411 C 552 0.00 1330 reject_low 10 ALIGNMENT 0 YS2-6e20.q1k vc_4 62 414 5832 5831 F 353 0.00 1330 reject_low 11 ALIGNMENT 382 YS2-6e20.p1k chr12 42 427 453090 453475 F 386 100.00 445 accept 0 ALIGNMENT 0 YS2-6e20.q1k vc_4 62 453 126 125 F 392 0.00 1330 reject_low 9 ALIGNMENT 36 YS2-6e20.q1k vc_5 451 416 1 36 C 36 100.00 1330 reject_low 19 ALIGNMENT 0 YS2-6e20.q1k vc_7 62 416 63 62 F 355 0.00 1330 reject_low 17 ALIGNMENT 0 YS2-6e20.q1k vc_7 62 416 13525 13524 F 355 0.00 1330 reject_low 18 ALIGNMENT 0 YS2-6e20.q1k vc_7 455 617 100 99 F 163 0.00 1330 reject_low 17 ALIGNMENT 0 YS2-6e20.p1k chr12 428 445 462612 462611 F 18 0.00 445 reject_low 1 ALIGNMENT 0 YS2-6e20.q1k vc_7 455 617 13562 13561 F 163 0.00 1330 reject_low 18 ALIGNMENT 39 YS2-6e20.q1k vc_5 454 416 5025 5063 C 39 100.00 1330 reject_low 16 ALIGNMENT 330 YS2-6e20.q1k vc_7 911 454 2271 2727 C 458 91.05 1330 reject_low 7 ALIGNMENT 82 YS2-6e20.q1k vc_4 540 454 1448 1534 C 87 98.85 1330 reject_low 12 ALIGNMENT 0 YS2-6e20.q1k vc_3 62 453 2531 2530 F 392 0.00 1330 reject_low 5 ALIGNMENT 382 YS2-6e20.p1k chr12 42 427 462227 462612 F 386 100.00 445 reject_low 1 ALIGNMENT 145 YS2-6e20.q1k vc_4 454 615 6353 6514 F 162 96.91 1330|1,0 reject_low 11 ALIGNMENT 0 YS2-6e20.q1k chr12 617 415 462225 462224 C 203 0.00 1330 accept 0 ALIGNMENT 0 YS2-6e20.q1k vc_4 455 454 5872 6353 F 0 0.00 1330 reject_low 11 ALIGNMENT 330 YS2-6e20.q1k vc_2 454 911 2164 2620 F 458 91.27 1330 reject_low 4 ALIGNMENT 0 YS2-6e20.q1k vc_1 62 453 2531 2530 F 392 0.00 1330 reject_low 3 ALIGNMENT 363 YS2-6e20.q1k chr12 414 26 453087 453475 C 389 97.94 1330 reject_low 2 ALIGNMENT 0 YS2-6e20.q1k vc_5 415 62 5064 5063 C 354 0.00 1330 reject_low 16 ALIGNMENT 0 YS2-6e20.q1k vc_4 453 62 1535 1534 C 392 0.00 1330 reject_low 12 ALIGNMENT 330 YS2-6e20.q1k vc_1 454 911 2531 2987 F 458 91.27 1330 reject_low 3 ALIGNMENT 0 YS2-6e20.p1k chr12 428 445 453475 453474 F 18 0.00 445 accept 0 ALIGNMENT 143 YS2-6e20.q1k vc_7 911 664 4926 5172 C 248 86.29 1330|0,1 reject_low 10 ALIGNMENT 0 YS2-6e20.q1k vc_5 415 62 37 36 C 354 0.00 1330 reject_low 19 ALIGNMENT 0 YS2-6e20.q1k vc_7 453 62 2728 2727 C 392 0.00 1330 reject_low 7 ALIGNMENT 38 YS2-6e20.q1k vc_7 417 454 13525 13562 F 38 100.00 1330 reject_low 18 ALIGNMENT 40 YS2-6e20.q1k vc_2 454 415 2105 2144 C 40 100.00 1330 reject_low 14 ALIGNMENT 0 YS2-6e20.q1k vc_3 414 62 2512 2511 C 353 0.00 1330 reject_low 15 ALIGNMENT 40 YS2-6e20.q1k vc_3 454 415 2472 2511 C 40 100.00 1330 reject_low 15 ALIGNMENT 0 YS2-6e21.q1k vc_4 62 429 6353 6352 F 368 0.00 1311 reject_low 8 ALIGNMENT 0 YS2-6e21.q1k vc_5 62 429 2398 2397 F 368 0.00 1311 reject_low 4 ALIGNMENT 0 YS2-6e21.q1k vc_5 389 62 39 38 C 328 0.00 1311 reject_low 11 ALIGNMENT 309 YS2-6e21.p1k chr10 70 394 28382 28706 F 325 99.38 413 ambiguous_tel 1 ALIGNMENT 0 YS2-6e21.q1k vc_3 62 429 2531 2530 F 368 0.00 1311 reject_low 3 ALIGNMENT 0 YS2-6e21.q1k vc_7 429 62 2728 2727 C 368 0.00 1311 reject_low 5 ALIGNMENT 138 YS2-6e21.q1k vc_3 430 675 2531 2775 F 246 85.77 1311 reject_low 3 ALIGNMENT 138 YS2-6e21.q1k vc_1 430 675 2531 2775 F 246 85.77 1311 reject_low 2 ALIGNMENT 0 YS2-6e21.q1k vc_1 62 429 2531 2530 F 368 0.00 1311 reject_low 2 ALIGNMENT 0 YS2-6e21.q1k vc_5 389 62 5066 5065 C 328 0.00 1311 reject_low 10 ALIGNMENT 0 YS2-6e21.p1k chr10 395 413 28706 28705 F 19 0.00 413 ambiguous_tel 1 ALIGNMENT 0 YS2-6e21.q1k vc_4 429 62 1535 1534 C 368 0.00 1311 reject_low 9 ALIGNMENT 0 YS2-6e21.q1k vc_4 429 62 5813 5812 C 368 0.00 1311 reject_low 6 ALIGNMENT 138 YS2-6e21.q1k vc_5 430 675 2398 2642 F 246 85.77 1311 reject_low 4 ALIGNMENT 33 YS2-6e21.q1k vc_5 428 390 5027 5065 C 39 94.87 1311 reject_low 10 ALIGNMENT 32 YS2-6e21.q1k vc_5 427 390 1 38 C 38 94.74 1311 reject_low 11 ALIGNMENT 328 YS2-6e21.q1k chr10 390 32 28342 28700 C 359 98.05 1311 ambiguous_tel 0 ALIGNMENT 0 YS2-6e21.q1k vc_4 62 429 126 125 F 368 0.00 1311 reject_low 7 ALIGNMENT 112 YS2-6e21.q1k vc_4 430 592 6353 6514 F 163 90.18 1311 reject_low 8 ALIGNMENT 112 YS2-6e21.q1k vc_4 430 592 126 287 F 163 90.18 1311 reject_low 7 ALIGNMENT 136 YS2-6e21.q1k vc_4 675 430 5566 5812 C 246 86.18 1311 reject_low 6 ALIGNMENT 138 YS2-6e21.q1k vc_7 675 430 2483 2727 C 246 85.77 1311 reject_low 5 ALIGNMENT 74 YS2-6e21.q1k vc_4 516 430 1448 1534 C 87 95.40 1311 reject_low 9 ALIGNMENT 153 YS2-6e23.p1k chr16 34 191 466347 466504 F 158 100.00 209 accept 0 ALIGNMENT 0 YS2-6e23.p1k chr16 192 209 466504 466503 F 18 0.00 209 accept 0 ALIGNMENT 916 YS2-6e24.p1k chr14 70 1163 574605 575693 F 1094 95.61 1216 accept 0 ALIGNMENT 296 YS2-6e24.q1k chr14 557 50 579385 579885 C 508 87.20 1345 accept 0 ALIGNMENT 130 YS2-6f01.p1k chr16 85 280 856653 856848 F 196 89.80 1379 reject_low 8 ALIGNMENT 127 YS2-6f01.p1k chr14 85 280 726347 726542 F 196 89.29 1379 reject_low 17 ALIGNMENT 128 YS2-6f01.p1k chr09 85 280 210417 210611 F 196 89.80 1379 reject_low 12 ALIGNMENT 131 YS2-6f01.p1k chr14 85 280 546851 547045 F 196 90.31 1379 reject_low 7 ALIGNMENT 135 YS2-6f01.p1k chr02 67 280 197811 198024 F 214 88.79 1379 reject_low 3 ALIGNMENT 128 YS2-6f01.p1k chr04 278 85 945984 946177 C 194 89.69 1379 reject_low 15 ALIGNMENT 113 YS2-6f01.p1k chr12 278 67 168077 168285 C 212 86.32 1379 reject_low 19 ALIGNMENT 147 YS2-6f01.p1k chr16 67 280 880476 880689 F 214 90.65 1379 reject_low 2 ALIGNMENT 0 YS2-6f01.p1k chr06 92 325 162217 162216 F 234 0.00 1379 reject_low 1 ALIGNMENT 128 YS2-6f01.p1k chr07 85 280 712322 712516 F 196 89.80 1379 reject_low 10 ALIGNMENT 128 YS2-6f01.p1k chr01 85 280 182726 182920 F 196 89.80 1379 reject_low 9 ALIGNMENT 135 YS2-6f01.p1k chr05 280 67 434660 434873 C 214 88.79 1379 reject_low 5 ALIGNMENT 128 YS2-6f01.p1k chr15 85 280 854385 854579 F 196 89.80 1379 reject_low 14 ALIGNMENT 132 YS2-6f01.p1k chr04 280 67 645268 645481 C 214 88.32 1379 reject_low 6 ALIGNMENT 0 YS2-6f01.p1k chr04 130 92 1175308 1175307 C 39 0.00 1379 reject_low 20 ALIGNMENT 104 YS2-6f01.p1k chr12 67 278 793655 793865 F 212 84.43 1379 reject_low 21 ALIGNMENT 125 YS2-6f01.p1k chr12 85 280 374112 374306 F 196 89.29 1379 reject_low 18 ALIGNMENT 125 YS2-6f01.p1k chr04 280 131 1175158 1175307 C 150 95.33 1379 reject_low 20 ALIGNMENT 69 YS2-6f01.p1k chr06 326 400 162217 162291 F 75 97.33 1379 reject_low 1 ALIGNMENT 128 YS2-6f01.p1k chr11 280 85 202323 202517 C 196 89.80 1379 reject_low 13 ALIGNMENT 135 YS2-6f01.p1k chr05 280 67 249962 250175 C 214 88.79 1379 reject_low 4 ALIGNMENT 128 YS2-6f01.p1k chr09 85 280 205329 205523 F 196 89.80 1379 reject_low 11 ALIGNMENT 127 YS2-6f01.p1k chr08 280 85 146357 146552 C 196 89.29 1379 reject_low 16 ALIGNMENT 498 YS2-6f01.p1k chr07 39 850 845360 846168 F 812 87.81 1379 accept 0 ALIGNMENT 673 YS2-6f02.q1k chr10 25 858 339352 340177 F 834 94.84 1409 accept 0 ALIGNMENT 989 YS2-6f02.p1k chr10 1182 33 343427 344587 C 1150 96.61 1286 accept 0 ALIGNMENT 0 YS2-6f03.q1k vc_4 239 62 6338 6337 C 178 0.00 1048 reject_low 9 ALIGNMENT 0 YS2-6f03.q1k vc_7 304 304 4700 4921 C 1 0.00 1048 reject_low 6 ALIGNMENT 229 YS2-6f03.q1k vc_7 303 53 4922 5172 C 251 97.21 1048|0,1 reject_low 6 ALIGNMENT 283 YS2-6f03.q1k vc_2 1 303 2322 2624 F 303 98.02 1048 reject_low 4 ALIGNMENT 55 YS2-6f03.q1k vc_4 304 240 46 110 C 65 95.38 1048 reject_low 8 ALIGNMENT 337 YS2-6f03.q1k vc_4 419 1 5237 5654 C 419 94.27 1048 reject_low 2 ALIGNMENT 55 YS2-6f03.q1k vc_4 304 240 6273 6337 C 65 95.38 1048 reject_low 9 ALIGNMENT 383 YS2-6f03.q1k vc_7 526 1 2049 2569 C 526 91.83 1048 reject_vc 1 ALIGNMENT 0 YS2-6f03.q1k vc_4 62 239 1550 1549 F 178 0.00 1048 reject_low 7 ALIGNMENT 51 YS2-6f03.q1k vc_7 54 3 6360 6411 C 52 100.00 1048|1,0 reject_low 6 ALIGNMENT 0 YS2-6f03.q1k vc_4 305 310 1615 1881 F 6 0.00 1048 reject_low 7 ALIGNMENT 283 YS2-6f03.q1k vc_1 1 303 2689 2991 F 303 98.02 1048 reject_low 3 ALIGNMENT 0 YS2-6f03.q1k vc_4 239 62 111 110 C 178 0.00 1048 reject_low 8 ALIGNMENT 0 YS2-6f03.q1k vc_7 53 54 5172 6360 C 0 0.00 1048 reject_low 6 ALIGNMENT 59 YS2-6f03.q1k vc_7 419 305 4588 4699 C 115 86.09 1048 reject_low 6 ALIGNMENT 383 YS2-6f03.q1k vc_5 1 526 2556 3076 F 526 91.83 1048 reject_vc 0 ALIGNMENT 283 YS2-6f03.q1k vc_3 1 303 2689 2991 F 303 98.02 1048 reject_low 5 ALIGNMENT 94 YS2-6f03.q1k vc_4 311 526 1882 2092 F 216 83.33 1048 reject_low 7 ALIGNMENT 55 YS2-6f03.q1k vc_4 240 304 1550 1614 F 65 95.38 1048 reject_low 7 ALIGNMENT 357 YS2-6f04.p1k chr12 1152 589 7107 7674 C 564 88.48 1405 reject_low 18 ALIGNMENT 90 YS2-6f04.p1k chr05 926 677 1805 2054 C 250 79.20 1405 reject_low 199 ALIGNMENT 0 YS2-6f04.p1k chr16 62 588 946074 946073 F 527 0.00 1405 reject_low 77 ALIGNMENT 433 YS2-6f04.q1k chr14 32 752 1047 1763 F 721 87.52 1416 ambiguous_tel 12 ALIGNMENT 0 YS2-6f04.p1k chr12 62 692 1069602 1069601 F 631 0.00 1405 reject_low 197 ALIGNMENT 448 YS2-6f04.q1k chr12 32 734 1156 1854 F 703 88.76 1416 ambiguous_tel 4 ALIGNMENT 0 YS2-6f04.p1k chr05 578 62 1757 1756 C 517 0.00 1405 reject_low 117 ALIGNMENT 0 YS2-6f04.p1k chr09 588 62 1999 1998 C 527 0.00 1405 reject_low 75 ALIGNMENT 69 YS2-6f04.p1k chr02 809 589 1830 2050 C 221 77.38 1405 reject_low 242 ALIGNMENT 0 YS2-6f04.p1k chr16 639 845 946483 946482 F 207 0.00 1405 reject_low 323 ALIGNMENT 0 YS2-6f04.p1k chr12 586 62 1818 1817 C 525 0.00 1405 reject_low 228 ALIGNMENT 64 YS2-6f04.p1k chr12 765 938 1076265 1076438 F 174 79.89 1405 reject_low 343 ALIGNMENT 0 YS2-6f04.p1k chr16 62 588 946254 946253 F 527 0.00 1405 reject_low 118 ALIGNMENT 33 YS2-6f04.p1k chr04 873 938 1530064 1530129 F 66 83.33 1405 reject_low 289 ALIGNMENT 201 YS2-6f04.p1k chr16 579 937 946100 946458 F 359 85.79 1405 reject_low 71 ALIGNMENT 0 YS2-6f04.p1k chr15 62 620 1089229 1089228 F 559 0.00 1405 reject_low 129 ALIGNMENT 689 YS2-6f04.p1k chr06 1152 22 674 1804 C 1131 87.98 1405 ambiguous_tel 0 ALIGNMENT 0 YS2-6f04.p1k chr12 62 872 1069602 1069601 F 811 0.00 1405 reject_low 293 ALIGNMENT 29 YS2-6f04.p1k chr02 629 589 1830 1870 C 41 90.24 1405 reject_low 318 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 2104 2103 C 527 0.00 1405 reject_low 80 ALIGNMENT 0 YS2-6f04.p1k chr15 62 578 1089367 1089366 F 517 0.00 1405 reject_low 93 ALIGNMENT 76 YS2-6f04.p1k chr04 729 926 1530064 1530261 F 198 79.80 1405 reject_low 224 ALIGNMENT 82 YS2-6f04.p1k chr12 589 757 1076521 1076689 F 169 82.84 1405 reject_low 211 ALIGNMENT 119 YS2-6f04.p1k chr10 793 587 1669 1875 C 207 85.99 1405 reject_low 158 ALIGNMENT 49 YS2-6f04.q1k chr12 563 659 7362 7458 F 97 84.54 1416 reject_low 54 ALIGNMENT 67 YS2-6f04.p1k chr12 938 765 2042 2215 C 174 80.46 1405 reject_low 342 ALIGNMENT 0 YS2-6f04.p1k chr12 62 836 1069602 1069601 F 775 0.00 1405 reject_low 281 ALIGNMENT 131 YS2-6f04.p1k chr12 934 657 1938 2215 C 278 82.73 1405 reject_low 335 ALIGNMENT 64 YS2-6f04.p1k chr12 765 938 1069602 1069775 F 174 79.89 1405 reject_low 254 ALIGNMENT 64 YS2-6f04.p1k chr04 765 938 1530064 1530237 F 174 79.89 1405 reject_low 253 ALIGNMENT 120 YS2-6f04.p1k chr02 845 579 1830 2096 C 267 82.02 1405 reject_low 151 ALIGNMENT 0 YS2-6f04.p1k chr14 800 62 1999 1998 C 739 0.00 1405 reject_low 261 ALIGNMENT 201 YS2-6f04.p1k chr09 937 579 1866 2224 C 359 85.79 1405 reject_low 48,58 ALIGNMENT 91 YS2-6f04.p1k chr13 937 693 1847 2091 C 245 79.59 1405 reject_low 188 ALIGNMENT 210 YS2-6f04.p1k chr10 937 589 1777 2125 C 349 87.11 1405 reject_low 41 ALIGNMENT 52 YS2-6f04.p1k chr09 685 579 1686 1792 C 107 83.18 1405 reject_low 265 ALIGNMENT 165 YS2-6f04.p1k chr07 589 901 1089082 1089394 F 313 84.35 1405 reject_low 99 ALIGNMENT 439 YS2-6f04.q1k chr05 752 32 575128 575844 C 721 87.79 1416 ambiguous_tel 1 ALIGNMENT 79 YS2-6f04.p1k chr12 926 729 2018 2215 C 198 80.30 1405 reject_low 344 ALIGNMENT 351 YS2-6f04.p1k chr09 1152 589 1467 2034 C 564 88.12 1405 reject_low 29 ALIGNMENT 0 YS2-6f04.p1k chr16 588 62 1688 1687 C 527 0.00 1405 reject_low 178 ALIGNMENT 0 YS2-6f04.p1k chr05 588 62 1603 1602 C 527 0.00 1405 reject_low 264 ALIGNMENT 0 YS2-6f04.p1k chr08 651 62 1901 1900 C 590 0.00 1405 reject_low 135 ALIGNMENT 171 YS2-6f04.p1k chr07 579 865 1089108 1089394 F 287 86.76 1405 reject_low 66 ALIGNMENT 732 YS2-6f04.p1k chr12 22 937 1075713 1076653 F 916 93.56 1405 ambiguous_tel 9 ALIGNMENT 0 YS2-6f04.p1k chr12 578 62 1898 1897 C 517 0.00 1405 reject_low 153 ALIGNMENT 67 YS2-6f04.p1k chr12 710 589 7337 7458 C 122 85.25 1405|9,0 reject_low 340,344 ALIGNMENT 52 YS2-6f04.q1k chr05 563 659 1542 1638 F 97 85.57 1416 reject_low 44 ALIGNMENT 171 YS2-6f04.p1k chr09 865 579 1686 1972 C 287 86.76 1405 reject_low 88 ALIGNMENT 0 YS2-6f04.p1k chr13 588 62 1980 1979 C 527 0.00 1405 reject_low 101 ALIGNMENT 0 YS2-6f04.p1k chr16 845 615 1483 1482 C 231 0.00 1405 reject_low 312 ALIGNMENT 57 YS2-6f04.p1k chr15 801 937 1089229 1089365 F 137 81.02 1405 reject_low 269 ALIGNMENT 0 YS2-6f04.p1k chr16 845 826 1488 1487 C 20 0.00 1405 reject_low 169 ALIGNMENT 0 YS2-6f04.p1k chr12 845 794 1684 1683 C 52 0.00 1405 reject_low 153 ALIGNMENT 180 YS2-6f04.p1k chr09 937 580 1974 2331 C 358 83.80 1405 reject_low 68 ALIGNMENT 35 YS2-6f04.q1k chr02 563 626 1738 1801 F 64 85.94 1416 reject_low 53 ALIGNMENT 0 YS2-6f04.p1k chr15 758 845 1089653 1089652 F 88 0.00 1405 reject_low 214 ALIGNMENT 57 YS2-6f04.p1k chr04 801 937 1530064 1530200 F 137 81.02 1405 reject_low 267 ALIGNMENT 0 YS2-6f04.p1k chr05 794 845 575317 575316 F 52 0.00 1405 reject_low 171 ALIGNMENT 0 YS2-6f04.p1k chr16 62 800 945962 945961 F 739 0.00 1405 reject_low 263 ALIGNMENT 33 YS2-6f04.p1k chr16 938 873 1842 1907 C 66 83.33 1405 reject_low 297 ALIGNMENT 79 YS2-6f04.p1k chr12 926 729 7553 7750 C 198 80.30 1405 reject_low 104 ALIGNMENT 105 YS2-6f04.p1k chr13 793 589 1667 1871 C 205 83.90 1405 reject_low 175 ALIGNMENT 155 YS2-6f04.p1k chr08 657 934 560417 560694 F 278 85.61 1405 reject_low 119 ALIGNMENT 0 YS2-6f04.p1k chr07 62 692 1088970 1088969 F 631 0.00 1405 reject_low 186 ALIGNMENT 0 YS2-6f04.p1k chr16 578 62 1770 1769 C 517 0.00 1405 reject_low 94 ALIGNMENT 0 YS2-6f04.p1k chr13 845 794 1668 1667 C 52 0.00 1405 reject_low 175 ALIGNMENT 67 YS2-6f04.p1k chr12 589 710 1076557 1076678 F 122 85.25 1405 reject_low 248 ALIGNMENT 0 YS2-6f04.p1k chr05 845 615 1470 1469 C 231 0.00 1405 reject_low 302 ALIGNMENT 0 YS2-6f04.p1k chr16 845 794 1484 1483 C 52 0.00 1405 reject_low 178 ALIGNMENT 0 YS2-6f04.p1k chr07 826 845 1089390 1089389 F 20 0.00 1405 reject_low 164 ALIGNMENT 41 YS2-6f04.p1k chr06 938 764 1072 1246 C 175 76.00 1405 reject_low 276 ALIGNMENT 166 YS2-6f04.p1k chr08 587 865 560563 560841 F 279 86.74 1405 reject_low 97 ALIGNMENT 171 YS2-6f04.p1k chr12 865 579 7326 7612 C 287 86.76 1405 reject_low 327,328,329,330 ALIGNMENT 0 YS2-6f04.p1k chr14 578 62 1609 1608 C 517 0.00 1405 reject_low 310 ALIGNMENT 38 YS2-6f04.q1k chr10 563 626 2065 2128 F 64 87.50 1416 reject_low 82 ALIGNMENT 161 YS2-6f04.p1k chr09 942 635 1897 2204 C 308 84.42 1405 reject_low 87 ALIGNMENT 0 YS2-6f04.p1k chr10 588 62 2126 2125 C 527 0.00 1405 reject_low 41 ALIGNMENT 0 YS2-6f04.p1k chr07 62 588 1089226 1089225 F 527 0.00 1405 reject_low 209 ALIGNMENT 0 YS2-6f04.p1k chr08 794 845 560841 560840 F 52 0.00 1405 reject_low 173 ALIGNMENT 39 YS2-6f04.q1k chr08 662 563 560562 560661 C 100 81.00 1416 reject_low 60 ALIGNMENT 165 YS2-6f04.p1k chr09 937 589 1830 2178 C 349 82.81 1405 reject_low 95 ALIGNMENT 165 YS2-6f04.p1k chr14 901 589 1574 1886 C 313 84.35 1405 reject_low 102 ALIGNMENT 0 YS2-6f04.p1k chr05 615 845 575318 575317 F 231 0.00 1405 reject_low 303 ALIGNMENT 152 YS2-6f04.p1k chr07 621 934 1088970 1089283 F 314 83.12 1405 reject_low 123 ALIGNMENT 0 YS2-6f04.p1k chr15 62 588 1089305 1089304 F 527 0.00 1405 reject_low 38,39 ALIGNMENT 111 YS2-6f04.p1k chr13 825 589 1671 1907 C 237 82.70 1405 reject_low 166 ALIGNMENT 261 YS2-6f04.p1k chr10 937 579 1705 2063 C 359 91.36 1405 reject_low 63 ALIGNMENT 141 YS2-6f04.p1k chr16 589 865 946218 946494 F 277 83.75 1405 reject_low 134 ALIGNMENT 0 YS2-6f04.p1k chr09 588 62 2143 2142 C 527 0.00 1405 reject_low 43 ALIGNMENT 0 YS2-6f04.p1k chr08 62 588 560637 560636 F 527 0.00 1405 reject_low 173 ALIGNMENT 45 YS2-6f04.p1k chr08 926 800 1806 1932 C 127 78.74 1405 reject_low 155 ALIGNMENT 0 YS2-6f04.p1k chr07 62 620 1088970 1088969 F 559 0.00 1405 reject_low 123 ALIGNMENT 165 YS2-6f04.p1k chr05 589 901 575005 575317 F 313 84.35 1405 reject_low 98 ALIGNMENT 0 YS2-6f04.p1k chr08 62 588 560673 560672 F 527 0.00 1405 reject_low 210 ALIGNMENT 0 YS2-6f04.p1k chr08 799 62 1933 1932 C 738 0.00 1405 reject_low 155 ALIGNMENT 22 YS2-6f04.p1k chr10 614 589 1668 1693 C 26 96.15 1405 reject_low 325 ALIGNMENT 82 YS2-6f04.p1k chr12 589 757 1069858 1070026 F 169 82.84 1405 reject_low 343 ALIGNMENT 93 YS2-6f04.p1k chr05 793 589 1470 1674 C 205 81.95 1405 reject_low 193 ALIGNMENT 171 YS2-6f04.p1k chr04 579 865 1530202 1530488 F 287 86.76 1405 reject_low 67 ALIGNMENT 0 YS2-6f04.p1k chr16 656 62 1908 1907 C 595 0.00 1405 reject_low 145 ALIGNMENT 29 YS2-6f04.q1k chr12 563 626 1971 2034 F 64 82.81 1416 reject_low 329 ALIGNMENT 315 YS2-6f04.p1k chr12 589 1075 1069678 1070165 F 487 88.91 1405 reject_low 32,33,35,36,37 ALIGNMENT 0 YS2-6f04.p1k chr15 62 588 1089341 1089340 F 527 0.00 1405 reject_low 111 ALIGNMENT 0 YS2-6f04.p1k chr16 62 692 945962 945961 F 631 0.00 1405 reject_low 191 ALIGNMENT 0 YS2-6f04.p1k chr15 62 588 1089413 1089412 F 527 0.00 1405 reject_low 168 ALIGNMENT 25 YS2-6f04.p1k chr12 614 579 1682 1717 C 36 91.67 1405 reject_low 307 ALIGNMENT 0 YS2-6f04.p1k chr05 62 728 574893 574892 F 667 0.00 1405 reject_low 220 ALIGNMENT 0 YS2-6f04.p1k chr15 794 845 1089653 1089652 F 52 0.00 1405 reject_low 177 ALIGNMENT 131 YS2-6f04.p1k chr07 657 934 1088970 1089247 F 278 82.73 1405 reject_low 141 ALIGNMENT 0 YS2-6f04.p1k chr12 728 711 2216 7336 C 18 0.00 1405 reject_low 344 ALIGNMENT 0 YS2-6f04.p1k chr10 578 62 2100 2099 C 517 0.00 1405 reject_low 85 ALIGNMENT 152 YS2-6f04.p1k chr05 621 934 574893 575206 F 314 83.12 1405 reject_low 122 ALIGNMENT 33 YS2-6f04.p1k chr05 873 938 574893 574958 F 66 83.33 1405 reject_low 290 ALIGNMENT 0 YS2-6f04.p1k chr06 588 62 954 953 C 527 0.00 1405 reject_low 275 ALIGNMENT 0 YS2-6f04.p1k chr05 62 578 575031 575030 F 517 0.00 1405 reject_low 65 ALIGNMENT 67 YS2-6f04.p1k chr08 589 710 560709 560830 F 122 85.25 1405 reject_low 247 ALIGNMENT 0 YS2-6f04.p1k chr16 588 62 1616 1615 C 527 0.00 1405 reject_low 252 ALIGNMENT 0 YS2-6f04.p1k chr08 62 692 560417 560416 F 631 0.00 1405 reject_low 182 ALIGNMENT 0 YS2-6f04.p1k chr13 588 62 1872 1871 C 527 0.00 1405 reject_low 175 ALIGNMENT 0 YS2-6f04.p1k chr09 708 62 2383 2382 C 647 0.00 1405 reject_low 272 ALIGNMENT 91 YS2-6f04.p1k chr10 937 637 2065 2365 C 301 77.08 1405 reject_low 46 ALIGNMENT 0 YS2-6f04.p1k chr02 586 62 2269 2268 C 525 0.00 1405 reject_low 70 ALIGNMENT 0 YS2-6f04.p1k chr07 62 764 1088970 1088969 F 703 0.00 1405 reject_low 234 ALIGNMENT 0 YS2-6f04.p1k chr09 588 62 1927 1926 C 527 0.00 1405 reject_low 138 ALIGNMENT 0 YS2-6f04.p1k chr08 62 586 560563 560562 F 525 0.00 1405 reject_low 97 ALIGNMENT 82 YS2-6f04.p1k chr14 757 589 1574 1742 C 169 82.84 1405 reject_low 213 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 1996 1995 C 527 0.00 1405 reject_low 81 ALIGNMENT 0 YS2-6f04.p1k chr10 578 62 2064 2063 C 517 0.00 1405 reject_low 63 ALIGNMENT 138 YS2-6f04.p1k chr02 881 589 1830 2122 C 293 82.59 1405 reject_low 136 ALIGNMENT 0 YS2-6f04.p1k chr10 588 62 2018 2017 C 527 0.00 1405 reject_low 34 ALIGNMENT 26 YS2-6f04.p1k chr05 638 589 1481 1530 C 50 84.00 1405 reject_low 321 ALIGNMENT 70 YS2-6f04.p1k chr09 710 579 1697 1828 C 132 84.85 1405 reject_low 218 ALIGNMENT 58 YS2-6f04.p1k chr08 937 764 1759 1932 C 174 78.74 1405 reject_low 112 ALIGNMENT 0 YS2-6f04.p1k chr09 578 62 1793 1792 C 517 0.00 1405 reject_low 265 ALIGNMENT 0 YS2-6f04.p1k chr12 578 62 7613 7612 C 517 0.00 1405 reject_low 327,328,329,330 ALIGNMENT 0 YS2-6f04.p1k chr12 578 62 2078 2077 C 517 0.00 1405 reject_low 73 ALIGNMENT 0 YS2-6f04.p1k chr09 670 62 2205 2204 C 609 0.00 1405 reject_low 125 ALIGNMENT 0 YS2-6f04.p1k chr05 62 588 574969 574968 F 527 0.00 1405 reject_low 21 ALIGNMENT 41 YS2-6f04.p1k chr12 926 837 7661 7750 C 90 82.22 1405 reject_low 280 ALIGNMENT 0 YS2-6f04.p1k chr07 62 578 1089360 1089359 F 517 0.00 1405 reject_low 304 ALIGNMENT 38 YS2-6f04.q1k chr12 566 651 1902 1987 F 86 82.56 1416 reject_low 327 ALIGNMENT 41 YS2-6f04.p1k chr16 926 837 1818 1907 C 90 82.22 1405 reject_low 285 ALIGNMENT 0 YS2-6f04.p1k chr04 62 578 1530202 1530201 F 517 0.00 1405 reject_low 67 ALIGNMENT 67 YS2-6f04.p1k chr16 710 589 1494 1615 C 122 85.25 1405 reject_low 252 ALIGNMENT 0 YS2-6f04.p1k chr06 845 794 894 893 C 52 0.00 1405 reject_low 114 ALIGNMENT 149 YS2-6f04.p1k chr12 621 934 1076265 1076578 F 314 82.80 1405 reject_low 333 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 7639 7638 C 527 0.00 1405 reject_low 100 ALIGNMENT 105 YS2-6f04.p1k chr14 793 589 1574 1778 C 205 83.90 1405 reject_low 176 ALIGNMENT 0 YS2-6f04.p1k chr07 62 656 1088970 1088969 F 595 0.00 1405 reject_low 141 ALIGNMENT 88 YS2-6f04.p1k chr12 693 937 1069602 1069846 F 245 79.18 1405 reject_low 197 ALIGNMENT 49 YS2-6f04.q1k chr05 659 563 575185 575281 C 97 84.54 1416 reject_low 21 ALIGNMENT 0 YS2-6f04.p1k chr02 800 62 2415 2414 C 739 0.00 1405 reject_low 115 ALIGNMENT 0 YS2-6f04.p1k chr04 62 764 1530064 1530063 F 703 0.00 1405 reject_low 253 ALIGNMENT 67 YS2-6f04.p1k chr07 765 938 1088970 1089143 F 174 80.46 1405 reject_low 234 ALIGNMENT 143 YS2-6f04.p1k chr05 825 587 1474 1712 C 239 87.03 1405 reject_low 131 ALIGNMENT 0 YS2-6f04.p1k chr05 845 639 1482 1481 C 207 0.00 1405 reject_low 321 ALIGNMENT 0 YS2-6f04.p1k chr16 62 578 946280 946279 F 517 0.00 1405 reject_low 154 ALIGNMENT 0 YS2-6f04.p1k chr08 845 639 1663 1662 C 207 0.00 1405 reject_low 300 ALIGNMENT 38 YS2-6f04.p1k chr08 926 831 1842 1937 C 96 80.21 1405 reject_low 299 ALIGNMENT 56 YS2-6f04.q1k chr10 563 709 1741 1887 F 147 80.27 1416 reject_low 41 ALIGNMENT 149 YS2-6f04.p1k chr12 621 934 1069602 1069915 F 314 82.80 1405 reject_low 128 ALIGNMENT 73 YS2-6f04.p1k chr06 685 579 893 999 C 107 89.72 1405 reject_low 204 ALIGNMENT 0 YS2-6f04.p1k chr05 62 588 575113 575112 F 527 0.00 1405 reject_low 171 ALIGNMENT 0 YS2-6f04.p1k chr07 615 845 1089395 1089394 F 231 0.00 1405 reject_low 304 ALIGNMENT 0 YS2-6f04.p1k chr12 794 800 1070027 1076264 F 7 0.00 1405 reject_low 339 ALIGNMENT 97 YS2-6f04.p1k chr16 589 757 946326 946494 F 169 85.80 1405 reject_low 184 ALIGNMENT 79 YS2-6f04.p1k chr05 729 926 574893 575090 F 198 80.30 1405 reject_low 220 ALIGNMENT 39 YS2-6f04.q1k chr02 563 752 2098 2287 F 190 74.21 1416 reject_low 45 ALIGNMENT 0 YS2-6f04.p1k chr09 588 62 2035 2034 C 527 0.00 1405 reject_low 29 ALIGNMENT 67 YS2-6f04.p1k chr05 589 710 575185 575306 F 122 85.25 1405 reject_low 245 ALIGNMENT 0 YS2-6f04.p1k chr08 588 62 1856 1855 C 527 0.00 1405 reject_low 147 ALIGNMENT 91 YS2-6f04.p1k chr07 693 937 1088970 1089214 F 245 79.59 1405 reject_low 186 ALIGNMENT 0 YS2-6f04.p1k chr12 711 845 1076678 1076677 F 135 0.00 1405 reject_low 248 ALIGNMENT 0 YS2-6f04.p1k chr15 62 764 1089229 1089228 F 703 0.00 1405 reject_low 255 ALIGNMENT 0 YS2-6f04.p1k chr12 845 639 1695 1694 C 207 0.00 1405 reject_low 322 ALIGNMENT 28 YS2-6f04.q1k chr04 625 563 1530246 1530308 C 63 82.54 1416 reject_low 67 ALIGNMENT 32 YS2-6f04.q1k chr10 563 626 2101 2164 F 64 84.38 1416 reject_low 130 ALIGNMENT 171 YS2-6f04.p1k chr15 579 865 1089367 1089653 F 287 86.76 1405 reject_low 93 ALIGNMENT 439 YS2-6f04.q1k chr15 752 32 1089464 1090180 C 721 87.79 1416 ambiguous_tel 10 ALIGNMENT 0 YS2-6f04.p1k chr02 836 62 2415 2414 C 775 0.00 1405 reject_low 161 ALIGNMENT 0 YS2-6f04.p1k chr12 62 588 1069822 1069821 F 527 0.00 1405 reject_low 339 ALIGNMENT 357 YS2-6f04.p1k chr16 1152 589 1264 1831 C 564 88.48 1405 reject_low 28 ALIGNMENT 0 YS2-6f04.p1k chr13 845 711 1679 1678 C 135 0.00 1405 reject_low 249 ALIGNMENT 162 YS2-6f04.p1k chr04 589 901 1530176 1530488 F 313 84.03 1405 reject_low 108 ALIGNMENT 0 YS2-6f04.p1k chr13 578 62 1954 1953 C 517 0.00 1405 reject_low 91 ALIGNMENT 60 YS2-6f04.p1k chr07 801 937 1088970 1089106 F 137 81.75 1405 reject_low 258 ALIGNMENT 0 YS2-6f04.p1k chr02 588 62 1871 1870 C 527 0.00 1405 reject_low 318 ALIGNMENT 128 YS2-6f04.p1k chr04 657 934 1530064 1530341 F 278 82.37 1405 reject_low 148 ALIGNMENT 0 YS2-6f04.p1k chr04 62 588 1530284 1530283 F 527 0.00 1405 reject_low 170 ALIGNMENT 88 YS2-6f04.p1k chr06 722 589 892 1025 C 134 88.81 1405 reject_low 202 ALIGNMENT 20 YS2-6f04.q1k chr09 563 589 1866 1892 F 27 92.59 1416 reject_low 68 ALIGNMENT 0 YS2-6f04.p1k chr08 738 62 1922 1921 C 677 0.00 1405 reject_low 243 ALIGNMENT 82 YS2-6f04.p1k chr13 757 589 1667 1835 C 169 82.84 1405 reject_low 212 ALIGNMENT 0 YS2-6f04.p1k chr02 578 62 2097 2096 C 517 0.00 1405 reject_low 151 ALIGNMENT 0 YS2-6f04.p1k chr06 636 62 1266 1265 C 575 0.00 1405 reject_low 216 ALIGNMENT 76 YS2-6f04.p1k chr12 729 926 1069602 1069799 F 198 79.80 1405 reject_low 225 ALIGNMENT 45 YS2-6f04.q1k chr12 563 752 1791 1980 F 190 75.26 1416 reject_low 19 ALIGNMENT 33 YS2-6f04.p1k chr12 938 873 2150 2215 C 66 83.33 1405 reject_low 327,328,329,330 ALIGNMENT 0 YS2-6f04.p1k chr12 62 728 1069602 1069601 F 667 0.00 1405 reject_low 225 ALIGNMENT 162 YS2-6f04.p1k chr12 589 901 1069714 1070026 F 313 84.03 1405 reject_low 109 ALIGNMENT 0 YS2-6f04.p1k chr12 656 615 2216 7324 C 42 0.00 1405 reject_low 335 ALIGNMENT 0 YS2-6f04.p1k chr08 62 578 560591 560590 F 517 0.00 1405 reject_low 156 ALIGNMENT 0 YS2-6f04.p1k chr16 615 845 946495 946494 F 231 0.00 1405 reject_low 313 ALIGNMENT 0 YS2-6f04.p1k chr05 578 62 1829 1828 C 517 0.00 1405 reject_low 25 ALIGNMENT 436 YS2-6f04.q1k chr13 32 752 1140 1856 F 721 87.66 1416 ambiguous_tel 11 ALIGNMENT 0 YS2-6f04.p1k chr09 845 711 1698 1697 C 135 0.00 1405 reject_low 218 ALIGNMENT 26 YS2-6f04.p1k chr12 638 589 1694 1743 C 50 84.00 1405 reject_low 322 ALIGNMENT 0 YS2-6f04.p1k chr16 836 62 1908 1907 C 775 0.00 1405 reject_low 285 ALIGNMENT 0 YS2-6f04.p1k chr15 711 845 1089642 1089641 F 135 0.00 1405 reject_low 251 ALIGNMENT 0 YS2-6f04.p1k chr09 845 758 1687 1686 C 88 0.00 1405 reject_low 194 ALIGNMENT 0 YS2-6f04.p1k chr13 845 758 1668 1667 C 88 0.00 1405 reject_low 212 ALIGNMENT 0 YS2-6f04.p1k chr16 800 62 1908 1907 C 739 0.00 1405 reject_low 262 ALIGNMENT 0 YS2-6f04.p1k chr07 62 588 1089082 1089081 F 527 0.00 1405 reject_low 99 ALIGNMENT 207 YS2-6f04.p1k chr10 901 589 1669 1981 C 313 88.82 1405 reject_low 76 ALIGNMENT 25 YS2-6f04.p1k chr05 614 579 1469 1504 C 36 91.67 1405 reject_low 302 ALIGNMENT 29 YS2-6f04.q1k chr12 626 563 1076338 1076401 C 64 82.81 1416 reject_low 36 ALIGNMENT 153 YS2-6f04.p1k chr05 901 589 1470 1782 C 313 83.07 1405 reject_low 124 ALIGNMENT 454 YS2-6f04.q1k chr16 734 32 946323 947021 C 703 89.05 1416 ambiguous_tel 5 ALIGNMENT 0 YS2-6f04.p1k chr15 826 845 1089649 1089648 F 20 0.00 1405 reject_low 168 ALIGNMENT 60 YS2-6f04.p1k chr12 937 801 7614 7750 C 137 81.75 1405 reject_low 259 ALIGNMENT 0 YS2-6f04.p1k chr05 845 711 1482 1481 C 135 0.00 1405 reject_low 264 ALIGNMENT 0 YS2-6f04.p1k chr15 62 578 1089619 1089618 F 517 0.00 1405 reject_low 311 ALIGNMENT 25 YS2-6f04.p1k chr14 614 579 1573 1608 C 36 91.67 1405 reject_low 310 ALIGNMENT 0 YS2-6f04.p1k chr05 588 62 1783 1782 C 527 0.00 1405 reject_low 124 ALIGNMENT 45 YS2-6f04.q1k chr02 563 734 1630 1801 F 172 76.16 1416 reject_low 42 ALIGNMENT 91 YS2-6f04.p1k chr16 937 693 1663 1907 C 245 79.59 1405 reject_low 190 ALIGNMENT 0 YS2-6f04.p1k chr04 758 845 1530488 1530487 F 88 0.00 1405 reject_low 207 ALIGNMENT 0 YS2-6f04.p1k chr14 588 62 1887 1886 C 527 0.00 1405 reject_low 102 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 7459 7458 C 527 0.00 1405 reject_low 340,344 ALIGNMENT 0 YS2-6f04.p1k chr14 588 62 1815 1814 C 527 0.00 1405 reject_low 167 ALIGNMENT 67 YS2-6f04.p1k chr04 589 710 1530356 1530477 F 122 85.25 1405 reject_low 244 ALIGNMENT 113 YS2-6f04.p1k chr02 757 587 1846 2016 C 171 88.89 1405 reject_low 160 ALIGNMENT 183 YS2-6f04.p1k chr10 937 579 1741 2099 C 359 84.12 1405 reject_low 85 ALIGNMENT 0 YS2-6f04.p1k chr02 578 62 1917 1916 C 517 0.00 1405 reject_low 217 ALIGNMENT 0 YS2-6f04.p1k chr10 578 62 1956 1955 C 517 0.00 1405 reject_low 89 ALIGNMENT 0 YS2-6f04.p1k chr16 578 62 1518 1517 C 517 0.00 1405 reject_low 312 ALIGNMENT 33 YS2-6f04.p1k chr14 938 873 1933 1998 C 66 83.33 1405 reject_low 295 ALIGNMENT 61 YS2-6f04.p1k chr05 710 589 1481 1602 C 122 83.61 1405 reject_low 264 ALIGNMENT 43 YS2-6f04.q1k chr10 563 659 1813 1909 F 97 82.47 1416 reject_low 50 ALIGNMENT 357 YS2-6f04.p1k chr07 589 1152 1089046 1089613 F 564 88.48 1405 reject_low 22 ALIGNMENT 0 YS2-6f04.p1k chr08 62 620 560417 560416 F 559 0.00 1405 reject_low 60,69 ALIGNMENT 138 YS2-6f04.p1k chr12 865 589 1683 1959 C 277 83.39 1405 reject_low 137 ALIGNMENT 60 YS2-6f04.p1k chr12 937 801 2079 2215 C 137 81.75 1405|0,13 reject_low 334,337 ALIGNMENT 0 YS2-6f04.p1k chr05 62 620 574893 574892 F 559 0.00 1405 reject_low 122 ALIGNMENT 53 YS2-6f04.q1k chr09 563 661 1794 1892 F 99 85.86 1416 reject_low 48 ALIGNMENT 0 YS2-6f04.p1k chr08 578 62 1722 1721 C 517 0.00 1405 reject_low 300 ALIGNMENT 0 YS2-6f04.p1k chr05 845 794 1471 1470 C 52 0.00 1405 reject_low 193 ALIGNMENT 131 YS2-6f04.p1k chr12 934 657 7473 7750 C 278 82.73 1405 reject_low 142 ALIGNMENT 103 YS2-6f04.p1k chr08 757 589 1651 1819 C 169 86.98 1405 reject_low 179 ALIGNMENT 0 YS2-6f04.p1k chr12 764 62 7751 7750 C 703 0.00 1405 reject_low 235 ALIGNMENT 0 YS2-6f04.p1k chr12 62 656 1069602 1069601 F 595 0.00 1405 reject_low 149 ALIGNMENT 89 YS2-6f04.p1k chr09 757 587 1686 1856 C 171 84.21 1405 reject_low 194 ALIGNMENT 0 YS2-6f04.p1k chr16 62 836 945962 945961 F 775 0.00 1405 reject_low 286 ALIGNMENT 21 YS2-6f04.p1k chr06 865 800 893 958 C 66 77.27 1405 reject_low 326 ALIGNMENT 41 YS2-6f04.p1k chr12 926 837 2126 2215 C 90 82.22 1405 reject_low 347 ALIGNMENT 0 YS2-6f04.p1k chr04 62 836 1530064 1530063 F 775 0.00 1405 reject_low 277 ALIGNMENT 0 YS2-6f04.p1k chr05 62 588 575185 575184 F 527 0.00 1405 reject_low 245 ALIGNMENT 0 YS2-6f04.p1k chr05 845 686 1471 1470 C 160 0.00 1405 reject_low 270 ALIGNMENT 111 YS2-6f04.p1k chr12 825 589 7330 7566 C 237 82.70 1405|12,0 reject_low 334 ALIGNMENT 0 YS2-6f04.p1k chr02 764 62 2415 2414 C 703 0.00 1405 reject_low 240 ALIGNMENT 73 YS2-6f04.p1k chr09 937 800 2046 2183 C 138 84.78 1405 reject_low 223 ALIGNMENT 0 YS2-6f04.p1k chr14 845 826 1579 1578 C 20 0.00 1405 reject_low 167 ALIGNMENT 0 YS2-6f04.p1k chr06 845 723 893 892 C 123 0.00 1405 reject_low 202 ALIGNMENT 73 YS2-6f04.p1k chr05 937 709 1830 2058 C 229 77.73 1405 reject_low 227 ALIGNMENT 165 YS2-6f04.p1k chr13 901 589 1667 1979 C 313 84.35 1405 reject_low 101 ALIGNMENT 723 YS2-6f04.p1k chr16 22 937 945410 946350 F 916 93.23 1405 ambiguous_tel 5 ALIGNMENT 0 YS2-6f04.p1k chr10 708 62 2366 2365 C 647 0.00 1405 reject_low 130 ALIGNMENT 0 YS2-6f04.p1k chr16 588 62 1652 1651 C 527 0.00 1405 reject_low 215 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 7531 7530 C 527 0.00 1405 reject_low 337 ALIGNMENT 0 YS2-6f04.p1k chr05 676 62 2055 2054 C 615 0.00 1405 reject_low 199 ALIGNMENT 41 YS2-6f04.p1k chr12 837 926 1076265 1076354 F 90 82.22 1405 reject_low 348 ALIGNMENT 0 YS2-6f04.p1k chr14 845 615 1574 1573 C 231 0.00 1405 reject_low 310 ALIGNMENT 0 YS2-6f04.p1k chr05 586 62 1713 1712 C 525 0.00 1405 reject_low 131 ALIGNMENT 0 YS2-6f04.p1k chr02 586 62 2017 2016 C 525 0.00 1405 reject_low 160 ALIGNMENT 0 YS2-6f04.p1k chr10 845 794 1670 1669 C 52 0.00 1405 reject_low 158 ALIGNMENT 0 YS2-6f04.p1k chr05 588 62 1675 1674 C 527 0.00 1405 reject_low 193 ALIGNMENT 0 YS2-6f04.p1k chr12 62 588 1069858 1069857 F 527 0.00 1405 reject_low 343 ALIGNMENT 0 YS2-6f04.p1k chr10 845 639 1681 1680 C 207 0.00 1405 reject_low 320 ALIGNMENT 111 YS2-6f04.p1k chr14 825 589 1578 1814 C 237 82.70 1405 reject_low 167 ALIGNMENT 201 YS2-6f04.p1k chr10 937 579 1849 2207 C 359 85.79 1405 reject_low 47,50 ALIGNMENT 0 YS2-6f04.p1k chr15 62 588 1089485 1089484 F 527 0.00 1405 reject_low 214 ALIGNMENT 61 YS2-6f04.p1k chr16 579 685 946388 946494 F 107 85.98 1405 reject_low 232 ALIGNMENT 0 YS2-6f04.p1k chr12 62 588 1076449 1076448 F 527 0.00 1405 reject_low 165 ALIGNMENT 149 YS2-6f04.p1k chr15 621 934 1089229 1089542 F 314 82.80 1405 reject_low 129 ALIGNMENT 49 YS2-6f04.q1k chr13 563 659 1703 1799 F 97 84.54 1416 reject_low 55 ALIGNMENT 88 YS2-6f04.p1k chr15 693 937 1089229 1089473 F 245 79.18 1405 reject_low 198 ALIGNMENT 0 YS2-6f04.p1k chr06 763 62 1247 1246 C 702 0.00 1405 reject_low 276 ALIGNMENT 204 YS2-6f04.p1k chr12 937 589 1791 2139 C 349 86.53 1405 reject_low 74 ALIGNMENT 0 YS2-6f04.p1k chr10 588 62 1910 1909 C 527 0.00 1405 reject_low 139 ALIGNMENT 33 YS2-6f04.p1k chr13 938 873 2026 2091 C 66 83.33 1405 reject_low 294 ALIGNMENT 155 YS2-6f04.p1k chr12 934 621 1902 2215 C 314 83.44 1405 reject_low 332 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 7675 7674 C 527 0.00 1405 reject_low 18 ALIGNMENT 0 YS2-6f04.p1k chr14 588 62 1743 1742 C 527 0.00 1405 reject_low 213 ALIGNMENT 111 YS2-6f04.p1k chr05 589 825 575077 575313 F 237 82.70 1405 reject_low 163 ALIGNMENT 460 YS2-6f04.q1k chr05 32 748 943 1655 F 717 88.84 1416 ambiguous_tel 13 ALIGNMENT 0 YS2-6f04.p1k chr07 62 588 1089190 1089189 F 527 0.00 1405 reject_low 172 ALIGNMENT 105 YS2-6f04.p1k chr08 589 793 560637 560841 F 205 83.90 1405 reject_low 173 ALIGNMENT 0 YS2-6f04.p1k chr12 701 702 2207 7345 C 0 0.00 1405 reject_low 340 ALIGNMENT 67 YS2-6f04.p1k chr16 938 765 1734 1907 C 174 80.46 1405 reject_low 238 ALIGNMENT 436 YS2-6f04.q1k chr08 752 32 560652 561368 C 721 87.66 1416 ambiguous_tel 14 ALIGNMENT 49 YS2-6f04.q1k chr02 563 659 1522 1618 F 97 84.54 1416 reject_low 49 ALIGNMENT 0 YS2-6f04.p1k chr14 764 62 1999 1998 C 703 0.00 1405 reject_low 237 ALIGNMENT 0 YS2-6f04.p1k chr12 62 588 1069714 1069713 F 527 0.00 1405 reject_low 109 ALIGNMENT 0 YS2-6f04.p1k chr08 826 845 560837 560836 F 20 0.00 1405 reject_low 156 ALIGNMENT 33 YS2-6f04.p1k chr12 938 873 7685 7750 C 66 83.33 1405 reject_low 292 ALIGNMENT 0 YS2-6f04.p1k chr14 620 62 1999 1998 C 559 0.00 1405 reject_low 56 ALIGNMENT 0 YS2-6f04.p1k chr16 826 845 946490 946489 F 20 0.00 1405 reject_low 118 ALIGNMENT 0 YS2-6f04.p1k chr13 692 62 2092 2091 C 631 0.00 1405 reject_low 188 ALIGNMENT 67 YS2-6f04.p1k chr13 710 589 1678 1799 C 122 85.25 1405 reject_low 249 ALIGNMENT 0 YS2-6f04.p1k chr12 62 588 1076341 1076340 F 527 0.00 1405 reject_low 40 ALIGNMENT 111 YS2-6f04.p1k chr16 825 589 1487 1723 C 237 82.70 1405 reject_low 169 ALIGNMENT 0 YS2-6f04.p1k chr13 872 62 2092 2091 C 811 0.00 1405 reject_low 294 ALIGNMENT 135 YS2-6f04.p1k chr09 825 589 1690 1926 C 237 86.08 1405 reject_low 138 ALIGNMENT 57 YS2-6f04.p1k chr12 801 937 1076265 1076401 F 137 81.02 1405|13,0 reject_low 336,339 ALIGNMENT 37 YS2-6f04.q1k chr16 659 563 946254 946350 C 97 80.41 1416 reject_low 24 ALIGNMENT 201 YS2-6f04.p1k chr16 589 937 946074 946422 F 349 86.25 1405 reject_low 77 ALIGNMENT 0 YS2-6f04.p1k chr08 686 62 1938 1937 C 625 0.00 1405 reject_low 205 ALIGNMENT 72 YS2-6f04.p1k chr12 710 587 1694 1817 C 124 86.29 1405 reject_low 228 ALIGNMENT 0 YS2-6f04.p1k chr16 62 588 946218 946217 F 527 0.00 1405 reject_low 134 ALIGNMENT 82 YS2-6f04.p1k chr15 589 757 1089485 1089653 F 169 82.84 1405 reject_low 214 ALIGNMENT 0 YS2-6f04.p1k chr13 764 62 2092 2091 C 703 0.00 1405 reject_low 236 ALIGNMENT 35 YS2-6f04.p1k chr02 926 837 2325 2414 C 90 80.00 1405 reject_low 161 ALIGNMENT 0 YS2-6f04.p1k chr13 588 62 2016 2015 C 527 0.00 1405 reject_low 26 ALIGNMENT 58 YS2-6f04.p1k chr05 685 589 1470 1566 C 97 86.60 1405 reject_low 270 ALIGNMENT 0 YS2-6f04.p1k chr02 588 62 2339 2338 C 527 0.00 1405 reject_low 86 ALIGNMENT 0 YS2-6f04.p1k chr12 836 615 2216 7324 C 222 0.00 1405 reject_low 347 ALIGNMENT 0 YS2-6f04.p1k chr12 62 578 1069740 1069739 F 517 0.00 1405 reject_low 331 ALIGNMENT 0 YS2-6f04.p1k chr12 615 845 1076690 1076689 F 231 0.00 1405 reject_low 308 ALIGNMENT 0 YS2-6f04.p1k chr13 800 62 2092 2091 C 739 0.00 1405 reject_low 260 ALIGNMENT 41 YS2-6f04.p1k chr13 926 837 2002 2091 C 90 82.22 1405 reject_low 282 ALIGNMENT 49 YS2-6f04.q1k chr16 563 659 1519 1615 F 97 84.54 1416 reject_low 57 ALIGNMENT 0 YS2-6f04.p1k chr12 62 800 1069602 1069601 F 739 0.00 1405 reject_low 268 ALIGNMENT 0 YS2-6f04.p1k chr12 794 845 1076689 1076688 F 52 0.00 1405 reject_low 174 ALIGNMENT 0 YS2-6f04.p1k chr08 62 578 560807 560806 F 517 0.00 1405 reject_low 306 ALIGNMENT 0 YS2-6f04.p1k chr06 579 62 1215 1214 C 518 0.00 1405 reject_low 159 ALIGNMENT 114 YS2-6f04.p1k chr12 793 579 1683 1897 C 215 84.65 1405 reject_low 153 ALIGNMENT 0 YS2-6f04.p1k chr16 62 578 946100 946099 F 517 0.00 1405 reject_low 71 ALIGNMENT 32 YS2-6f04.q1k chr10 563 626 1849 1912 F 64 84.38 1416 reject_low 61 ALIGNMENT 29 YS2-6f04.p1k chr09 638 594 1697 1741 C 45 88.89 1405 reject_low 319 ALIGNMENT 0 YS2-6f04.p1k chr10 845 615 1669 1668 C 231 0.00 1405 reject_low 325 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 2032 2031 C 527 0.00 1405 reject_low 30 ALIGNMENT 357 YS2-6f04.p1k chr13 1152 589 1448 2015 C 564 88.48 1405 reject_low 26 ALIGNMENT 54 YS2-6f04.q1k chr10 563 662 1777 1876 F 100 86.00 1416 reject_low 47 ALIGNMENT 0 YS2-6f04.p1k chr06 578 62 1108 1107 C 517 0.00 1405 reject_low 114 ALIGNMENT 49 YS2-6f04.q1k chr12 659 563 1076557 1076653 C 97 84.54 1416 reject_low 33 ALIGNMENT 25 YS2-6f04.p1k chr16 614 579 1482 1517 C 36 91.67 1405 reject_low 312 ALIGNMENT 49 YS2-6f04.q1k chr07 659 563 1089262 1089358 C 97 84.54 1416 reject_low 22 ALIGNMENT 0 YS2-6f04.p1k chr10 763 62 2347 2346 C 702 0.00 1405 reject_low 288 ALIGNMENT 147 YS2-6f04.p1k chr06 793 579 893 1107 C 215 89.77 1405 reject_low 114 ALIGNMENT 738 YS2-6f04.p1k chr05 22 937 574341 575281 F 916 93.78 1405 ambiguous_tel 1 ALIGNMENT 131 YS2-6f04.p1k chr05 657 934 574893 575170 F 278 82.73 1405 reject_low 140 ALIGNMENT 65 YS2-6f04.p1k chr02 665 579 1830 1916 C 87 91.95 1405 reject_low 217 ALIGNMENT 671 YS2-6f04.p1k chr02 926 22 2073 2968 C 905 91.93 1405 ambiguous_tel 15 ALIGNMENT 0 YS2-6f04.p1k chr05 588 62 1531 1530 C 527 0.00 1405 reject_low 321 ALIGNMENT 439 YS2-6f04.q1k chr08 32 662 1124 1750 F 631 90.81 1416 ambiguous_tel 6 ALIGNMENT 0 YS2-6f04.p1k chr12 62 588 1076485 1076484 F 527 0.00 1405 reject_low 174 ALIGNMENT 91 YS2-6f04.p1k chr16 693 937 945962 946206 F 245 79.59 1405 reject_low 191 ALIGNMENT 0 YS2-6f04.p1k chr06 708 62 1266 1265 C 647 0.00 1405 reject_low 132 ALIGNMENT 0 YS2-6f04.p1k chr10 845 758 1670 1669 C 88 0.00 1405 reject_low 195 ALIGNMENT 0 YS2-6f04.p1k chr08 62 872 560417 560416 F 811 0.00 1405 reject_low 317 ALIGNMENT 67 YS2-6f04.p1k chr05 765 938 574893 575066 F 174 80.46 1405 reject_low 233 ALIGNMENT 35 YS2-6f04.p1k chr08 837 926 560417 560506 F 90 80.00 1405 reject_low 315 ALIGNMENT 82 YS2-6f04.p1k chr07 589 757 1089226 1089394 F 169 82.84 1405 reject_low 209 ALIGNMENT 0 YS2-6f04.p1k chr05 588 62 1855 1854 C 527 0.00 1405 reject_low 79 ALIGNMENT 67 YS2-6f04.p1k chr14 710 589 1585 1706 C 122 85.25 1405 reject_low 250 ALIGNMENT 0 YS2-6f04.p1k chr15 62 872 1089229 1089228 F 811 0.00 1405 reject_low 296 ALIGNMENT 51 YS2-6f04.p1k chr05 926 764 1877 2039 C 163 77.91 1405 reject_low 273 ALIGNMENT 732 YS2-6f04.p1k chr12 22 937 1069050 1069990 F 916 93.56 1405 ambiguous_tel 8 ALIGNMENT 210 YS2-6f04.p1k chr09 937 589 1794 2142 C 349 87.11 1405 reject_low 43 ALIGNMENT 0 YS2-6f04.p1k chr08 882 62 1922 1921 C 821 0.00 1405 reject_low 314 ALIGNMENT 0 YS2-6f04.p1k chr04 62 588 1530248 1530247 F 527 0.00 1405 reject_low 162 ALIGNMENT 0 YS2-6f04.p1k chr05 845 826 1475 1474 C 20 0.00 1405 reject_low 131 ALIGNMENT 135 YS2-6f04.p1k chr10 825 589 1673 1909 C 237 86.08 1405 reject_low 139 ALIGNMENT 0 YS2-6f04.p1k chr09 676 62 2379 2378 C 615 0.00 1405 reject_low 201 ALIGNMENT 30 YS2-6f04.p1k chr08 873 926 560417 560470 F 54 85.19 1405 reject_low 317 ALIGNMENT 457 YS2-6f04.q1k chr09 32 752 1159 1875 F 721 88.63 1416 ambiguous_tel 16 ALIGNMENT 0 YS2-6f04.p1k chr16 62 588 946146 946145 F 527 0.00 1405 reject_low 24 ALIGNMENT 105 YS2-6f04.p1k chr15 589 793 1089449 1089653 F 205 83.90 1405 reject_low 177 ALIGNMENT 60 YS2-6f04.p1k chr16 801 937 945962 946098 F 137 81.75 1405 reject_low 263 ALIGNMENT 0 YS2-6f04.p1k chr08 758 845 560841 560840 F 88 0.00 1405 reject_low 210 ALIGNMENT 30 YS2-6f04.p1k chr02 926 873 2361 2414 C 54 85.19 1405 reject_low 316 ALIGNMENT 60 YS2-6f04.p1k chr05 801 937 574893 575029 F 137 81.75 1405 reject_low 257 ALIGNMENT 0 YS2-6f04.p1k chr13 845 615 1667 1666 C 231 0.00 1405 reject_low 309 ALIGNMENT 0 YS2-6f04.p1k chr12 800 62 7751 7750 C 739 0.00 1405 reject_low 259 ALIGNMENT 105 YS2-6f04.p1k chr12 589 793 1069822 1070026 F 205 83.90 1405 reject_low 339 ALIGNMENT 0 YS2-6f04.p1k chr10 578 62 1812 1811 C 517 0.00 1405 reject_low 219 ALIGNMENT 105 YS2-6f04.p1k chr12 793 589 7326 7530 C 205 83.90 1405 reject_low 337 ALIGNMENT 111 YS2-6f04.p1k chr07 589 825 1089154 1089390 F 237 82.70 1405 reject_low 164 ALIGNMENT 0 YS2-6f04.p1k chr05 62 656 574893 574892 F 595 0.00 1405 reject_low 140 ALIGNMENT 0 YS2-6f04.p1k chr12 728 62 7751 7750 C 667 0.00 1405 reject_low 104 ALIGNMENT 0 YS2-6f04.p1k chr08 62 588 560709 560708 F 527 0.00 1405 reject_low 247 ALIGNMENT 0 YS2-6f04.p1k chr07 62 800 1088970 1088969 F 739 0.00 1405 reject_low 258 ALIGNMENT 183 YS2-6f04.p1k chr09 937 579 1758 2116 C 359 84.12 1405 reject_low 84 ALIGNMENT 49 YS2-6f04.p1k chr06 926 709 1048 1265 C 218 74.31 1405 reject_low 132 ALIGNMENT 738 YS2-6f04.p1k chr07 22 937 1088418 1089358 F 916 93.78 1405 ambiguous_tel 2 ALIGNMENT 0 YS2-6f04.p1k chr16 62 656 945962 945961 F 595 0.00 1405 reject_low 146 ALIGNMENT 67 YS2-6f04.p1k chr14 938 765 1825 1998 C 174 80.46 1405 reject_low 237 ALIGNMENT 35 YS2-6f04.q1k chr08 563 626 1723 1786 F 64 85.94 1416 reject_low 112 ALIGNMENT 105 YS2-6f04.p1k chr05 589 793 575113 575317 F 205 83.90 1405 reject_low 171 ALIGNMENT 128 YS2-6f04.p1k chr12 657 934 1076265 1076542 F 278 82.37 1405 reject_low 338 ALIGNMENT 171 YS2-6f04.p1k chr16 865 579 1483 1769 C 287 86.76 1405 reject_low 94 ALIGNMENT 0 YS2-6f04.p1k chr05 845 758 1471 1470 C 88 0.00 1405 reject_low 180 ALIGNMENT 0 YS2-6f04.p1k chr12 826 845 1076685 1076684 F 20 0.00 1405 reject_low 165 ALIGNMENT 41 YS2-6f04.p1k chr07 837 926 1088970 1089059 F 90 82.22 1405 reject_low 279 ALIGNMENT 0 YS2-6f04.p1k chr16 845 758 1484 1483 C 88 0.00 1405 reject_low 215 ALIGNMENT 0 YS2-6f04.p1k chr16 588 62 1724 1723 C 527 0.00 1405 reject_low 169 ALIGNMENT 33 YS2-6f04.p1k chr07 873 938 1088970 1089035 F 66 83.33 1405 reject_low 291 ALIGNMENT 207 YS2-6f04.p1k chr09 901 589 1686 1998 C 313 88.82 1405 reject_low 75 ALIGNMENT 0 YS2-6f04.p1k chr16 620 62 1908 1907 C 559 0.00 1405 reject_low 57 ALIGNMENT 0 YS2-6f04.p1k chr14 656 62 1999 1998 C 595 0.00 1405 reject_low 144 ALIGNMENT 171 YS2-6f04.p1k chr10 865 579 1669 1955 C 287 86.76 1405 reject_low 89 ALIGNMENT 165 YS2-6f04.p1k chr16 901 589 1483 1795 C 313 84.35 1405 reject_low 103 ALIGNMENT 0 YS2-6f04.p1k chr08 588 62 1820 1819 C 527 0.00 1405 reject_low 179 ALIGNMENT 0 YS2-6f04.p1k chr02 620 62 2415 2414 C 559 0.00 1405 reject_low 64 ALIGNMENT 636 YS2-6f04.p1k chr10 926 22 2004 2921 C 905 90.17 1405 ambiguous_tel 17 ALIGNMENT 79 YS2-6f04.p1k chr07 729 926 1088970 1089167 F 198 80.30 1405 reject_low 221 ALIGNMENT 738 YS2-6f04.p1k chr14 937 22 1610 2550 C 916 93.67 1405 ambiguous_tel 12 ALIGNMENT 0 YS2-6f04.p1k chr02 845 630 1831 1830 C 216 0.00 1405 reject_low 318 ALIGNMENT 111 YS2-6f04.p1k chr12 589 825 1069786 1070022 F 237 82.70 1405|0,12 reject_low 336 ALIGNMENT 0 YS2-6f04.p1k chr12 764 758 2216 7325 C 7 0.00 1405 reject_low 342 ALIGNMENT 157 YS2-6f04.p1k chr02 926 657 2145 2414 C 270 86.30 1405 reject_low 45 ALIGNMENT 0 YS2-6f04.p1k chr13 845 826 1672 1671 C 20 0.00 1405 reject_low 166 ALIGNMENT 33 YS2-6f04.p1k chr12 873 938 1069602 1069667 F 66 83.33 1405 reject_low 293 ALIGNMENT 131 YS2-6f04.p1k chr16 657 934 945962 946239 F 278 82.73 1405 reject_low 146 ALIGNMENT 183 YS2-6f04.p1k chr02 937 589 1990 2338 C 349 84.53 1405 reject_low 86 ALIGNMENT 738 YS2-6f04.p1k chr16 937 22 1519 2459 C 916 93.67 1405 ambiguous_tel 3 ALIGNMENT 0 YS2-6f04.p1k chr09 578 62 2117 2116 C 517 0.00 1405 reject_low 84 ALIGNMENT 357 YS2-6f04.p1k chr05 589 1152 574969 575536 F 564 88.48 1405 reject_low 21 ALIGNMENT 0 YS2-6f04.p1k chr12 836 62 7751 7750 C 775 0.00 1405 reject_low 280 ALIGNMENT 180 YS2-6f04.p1k chr10 937 580 1957 2314 C 358 83.80 1405 reject_low 61 ALIGNMENT 0 YS2-6f04.p1k chr02 872 62 2415 2414 C 811 0.00 1405 reject_low 316 ALIGNMENT 0 YS2-6f04.p1k chr07 62 578 1089108 1089107 F 517 0.00 1405 reject_low 66 ALIGNMENT 26 YS2-6f04.p1k chr16 589 638 946434 946483 F 50 84.00 1405 reject_low 323 ALIGNMENT 0 YS2-6f04.p1k chr12 620 615 2216 7324 C 6 0.00 1405 reject_low 332 ALIGNMENT 29 YS2-6f04.p1k chr08 638 579 1662 1721 C 60 83.33 1405 reject_low 300 ALIGNMENT 67 YS2-6f04.p1k chr07 589 710 1089262 1089383 F 122 85.25 1405 reject_low 246 ALIGNMENT 0 YS2-6f04.p1k chr07 62 588 1089046 1089045 F 527 0.00 1405 reject_low 22 ALIGNMENT 152 YS2-6f04.p1k chr09 926 671 1949 2204 C 256 86.72 1405 reject_low 125 ALIGNMENT 0 YS2-6f04.p1k chr02 588 62 2051 2050 C 527 0.00 1405 reject_low 242 ALIGNMENT 218 YS2-6f04.p1k chr02 938 589 1845 2194 C 350 87.71 1405 reject_low 42,49,52,53 ALIGNMENT 0 YS2-6f04.p1k chr05 62 588 575077 575076 F 527 0.00 1405 reject_low 163 ALIGNMENT 119 YS2-6f04.p1k chr09 793 587 1686 1892 C 207 85.99 1405 reject_low 157 ALIGNMENT 198 YS2-6f04.p1k chr12 937 579 1719 2077 C 359 85.52 1405 reject_low 73 ALIGNMENT 34 YS2-6f04.q1k chr02 563 651 2026 2114 F 89 80.90 1416 reject_low 64 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 7495 7494 C 527 0.00 1405 reject_low 342 ALIGNMENT 0 YS2-6f04.p1k chr09 636 62 2383 2382 C 575 0.00 1405 reject_low 192 ALIGNMENT 375 YS2-6f04.p1k chr08 589 1152 560493 561060 F 564 89.54 1405 reject_low 20 ALIGNMENT 351 YS2-6f04.p1k chr12 1152 589 1464 2031 C 564 88.12 1405 reject_low 30 ALIGNMENT 0 YS2-6f04.p1k chr16 62 728 945962 945961 F 667 0.00 1405 reject_low 222 ALIGNMENT 0 YS2-6f04.p1k chr06 588 62 1026 1025 C 527 0.00 1405 reject_low 202 ALIGNMENT 149 YS2-6f04.p1k chr04 621 934 1530064 1530377 F 314 82.80 1405 reject_low 127 ALIGNMENT 165 YS2-6f04.p1k chr12 901 589 7326 7638 C 313 84.35 1405 reject_low 100 ALIGNMENT 66 YS2-6f04.p1k chr08 937 739 1723 1921 C 199 78.39 1405 reject_low 243 ALIGNMENT 41 YS2-6f04.p1k chr12 837 926 1069602 1069691 F 90 82.22 1405 reject_low 281 ALIGNMENT 0 YS2-6f04.p1k chr15 62 656 1089229 1089228 F 595 0.00 1405 reject_low 150 ALIGNMENT 25 YS2-6f04.p1k chr16 579 614 946460 946495 F 36 91.67 1405 reject_low 313 ALIGNMENT 0 YS2-6f04.p1k chr06 845 758 894 893 C 88 0.00 1405 reject_low 203 ALIGNMENT 0 YS2-6f04.p1k chr02 845 758 1847 1846 C 88 0.00 1405 reject_low 160 ALIGNMENT 67 YS2-6f04.p1k chr13 938 765 1918 2091 C 174 80.46 1405 reject_low 236 ALIGNMENT 0 YS2-6f04.p1k chr15 62 728 1089229 1089228 F 667 0.00 1405 reject_low 226 ALIGNMENT 72 YS2-6f04.p1k chr16 587 710 946360 946483 F 124 86.29 1405 reject_low 229 ALIGNMENT 354 YS2-6f04.p1k chr04 589 1152 1530140 1530707 F 564 88.30 1405 reject_low 23 ALIGNMENT 29 YS2-6f04.q1k chr13 563 626 1847 1910 F 64 82.81 1416 reject_low 105 ALIGNMENT 0 YS2-6f04.p1k chr05 578 62 1505 1504 C 517 0.00 1405 reject_low 302 ALIGNMENT 0 YS2-6f04.p1k chr09 578 62 2081 2080 C 517 0.00 1405 reject_low 62 ALIGNMENT 354 YS2-6f04.p1k chr16 589 1152 946146 946713 F 564 88.30 1405 reject_low 24 ALIGNMENT 0 YS2-6f04.p1k chr04 826 845 1530484 1530483 F 20 0.00 1405 reject_low 162 ALIGNMENT 91 YS2-6f04.p1k chr09 937 637 2082 2382 C 301 77.08 1405 reject_low 192 ALIGNMENT 0 YS2-6f04.p1k chr12 702 701 1070007 1076273 F 0 0.00 1405 reject_low 341 ALIGNMENT 167 YS2-6f04.p1k chr02 937 621 2098 2414 C 317 84.54 1405 reject_low 64 ALIGNMENT 0 YS2-6f04.p1k chr16 692 62 1908 1907 C 631 0.00 1405 reject_low 190 ALIGNMENT 0 YS2-6f04.p1k chr04 62 620 1530064 1530063 F 559 0.00 1405 reject_low 127 ALIGNMENT 0 YS2-6f04.p1k chr05 62 588 575149 575148 F 527 0.00 1405 reject_low 208 ALIGNMENT 0 YS2-6f04.p1k chr05 62 836 574893 574892 F 775 0.00 1405 reject_low 278 ALIGNMENT 0 YS2-6f04.p1k chr16 62 578 946388 946387 F 517 0.00 1405 reject_low 232 ALIGNMENT 64 YS2-6f04.p1k chr15 765 938 1089229 1089402 F 174 79.89 1405 reject_low 255 ALIGNMENT 0 YS2-6f04.p1k chr09 578 62 1973 1972 C 517 0.00 1405 reject_low 88 ALIGNMENT 0 YS2-6f04.p1k chr09 845 615 1686 1685 C 231 0.00 1405 reject_low 324 ALIGNMENT 97 YS2-6f04.p1k chr08 693 937 560417 560661 F 245 80.41 1405 reject_low 182 ALIGNMENT 0 YS2-6f04.p1k chr12 692 62 7751 7750 C 631 0.00 1405 reject_low 187 ALIGNMENT 198 YS2-6f04.p1k chr12 937 589 1755 2103 C 349 85.96 1405 reject_low 80 ALIGNMENT 0 YS2-6f04.p1k chr06 799 62 959 958 C 738 0.00 1405 reject_low 326 ALIGNMENT 0 YS2-6f04.p1k chr12 578 62 1718 1717 C 517 0.00 1405 reject_low 307 ALIGNMENT 111 YS2-6f04.p1k chr12 589 825 1076449 1076685 F 237 82.70 1405 reject_low 165 ALIGNMENT 0 YS2-6f04.p1k chr04 62 692 1530064 1530063 F 631 0.00 1405 reject_low 196 ALIGNMENT 0 YS2-6f04.p1k chr12 615 620 1070028 1076264 F 6 0.00 1405 reject_low 333 ALIGNMENT 88 YS2-6f04.p1k chr04 693 937 1530064 1530308 F 245 79.18 1405 reject_low 196 ALIGNMENT 171 YS2-6f04.p1k chr05 579 865 575031 575317 F 287 86.76 1405 reject_low 65 ALIGNMENT 0 YS2-6f04.p1k chr16 62 588 946434 946433 F 527 0.00 1405 reject_low 323 ALIGNMENT 79 YS2-6f04.p1k chr13 926 729 1894 2091 C 198 80.30 1405 reject_low 105 ALIGNMENT 29 YS2-6f04.q1k chr12 563 626 7506 7569 F 64 82.81 1416 reject_low 104 ALIGNMENT 25 YS2-6f04.p1k chr12 614 579 7325 7360 C 36 91.67 1405 reject_low 332,335,347 ALIGNMENT 0 YS2-6f04.p1k chr05 62 800 574893 574892 F 739 0.00 1405 reject_low 257 ALIGNMENT 0 YS2-6f04.p1k chr04 62 588 1530176 1530175 F 527 0.00 1405 reject_low 108 ALIGNMENT 88 YS2-6f04.p1k chr06 757 589 893 1061 C 169 84.02 1405 reject_low 203 ALIGNMENT 0 YS2-6f04.p1k chr09 634 62 2205 2204 C 573 0.00 1405 reject_low 87 ALIGNMENT 0 YS2-6f04.p1k chr05 826 845 575313 575312 F 20 0.00 1405 reject_low 163 ALIGNMENT 0 YS2-6f04.p1k chr13 588 62 1800 1799 C 527 0.00 1405 reject_low 249 ALIGNMENT 0 YS2-6f04.p1k chr09 593 62 1742 1741 C 532 0.00 1405 reject_low 319 ALIGNMENT 0 YS2-6f04.p1k chr12 845 686 1684 1683 C 160 0.00 1405 reject_low 231 ALIGNMENT 639 YS2-6f04.p1k chr09 926 22 2021 2938 C 905 90.28 1405 ambiguous_tel 16 ALIGNMENT 0 YS2-6f04.p1k chr12 758 764 1070027 1076264 F 7 0.00 1405 reject_low 343 ALIGNMENT 0 YS2-6f04.p1k chr12 62 588 1076521 1076520 F 527 0.00 1405 reject_low 211 ALIGNMENT 261 YS2-6f04.p1k chr09 937 579 1722 2080 C 359 91.36 1405 reject_low 62 ALIGNMENT 201 YS2-6f04.p1k chr12 901 589 1683 1995 C 313 88.18 1405 reject_low 81 ALIGNMENT 0 YS2-6f04.p1k chr16 62 872 945962 945961 F 811 0.00 1405 reject_low 298 ALIGNMENT 170 YS2-6f04.p1k chr08 621 934 560417 560730 F 314 85.03 1405 reject_low 60,69 ALIGNMENT 67 YS2-6f04.p1k chr15 589 710 1089521 1089642 F 122 85.25 1405 reject_low 251 ALIGNMENT 0 YS2-6f04.p1k chr12 866 872 1070027 1076264 F 7 0.00 1405 reject_low 331 ALIGNMENT 0 YS2-6f04.p1k chr13 836 62 2092 2091 C 775 0.00 1405 reject_low 282 ALIGNMENT 152 YS2-6f04.p1k chr12 934 621 7437 7750 C 314 83.12 1405 reject_low 54 ALIGNMENT 0 YS2-6f04.p1k chr09 799 62 2184 2183 C 738 0.00 1405 reject_low 223 ALIGNMENT 0 YS2-6f04.p1k chr15 62 800 1089229 1089228 F 739 0.00 1405 reject_low 269 ALIGNMENT 34 YS2-6f04.q1k chr12 563 659 1827 1923 F 97 79.38 1416 reject_low 328 ALIGNMENT 61 YS2-6f04.p1k chr12 685 579 1683 1789 C 107 85.98 1405 reject_low 231 ALIGNMENT 0 YS2-6f04.p1k chr10 588 62 1982 1981 C 527 0.00 1405 reject_low 76 ALIGNMENT 0 YS2-6f04.p1k chr12 656 62 7751 7750 C 595 0.00 1405 reject_low 142 ALIGNMENT 33 YS2-6f04.p1k chr15 873 938 1089229 1089294 F 66 83.33 1405 reject_low 296 ALIGNMENT 34 YS2-6f04.q1k chr09 563 623 1830 1890 F 61 86.89 1416 reject_low 58 ALIGNMENT 0 YS2-6f04.p1k chr16 711 845 946483 946482 F 135 0.00 1405 reject_low 229 ALIGNMENT 0 YS2-6f04.p1k chr05 711 845 575306 575305 F 135 0.00 1405 reject_low 245 ALIGNMENT 156 YS2-6f04.p1k chr12 825 589 1687 1923 C 237 89.03 1405 reject_low 121 ALIGNMENT 0 YS2-6f04.p1k chr14 588 62 1779 1778 C 527 0.00 1405 reject_low 176 ALIGNMENT 0 YS2-6f04.p1k chr05 588 62 1891 1890 C 527 0.00 1405 reject_low 83 ALIGNMENT 82 YS2-6f04.p1k chr08 589 757 560673 560841 F 169 82.84 1405 reject_low 210 ALIGNMENT 0 YS2-6f04.p1k chr14 588 62 1707 1706 C 527 0.00 1405 reject_low 250 ALIGNMENT 0 YS2-6f04.p1k chr12 872 866 2216 7325 C 7 0.00 1405 reject_low 327,328,329,330 ALIGNMENT 171 YS2-6f04.p1k chr14 865 579 1574 1860 C 287 86.76 1405 reject_low 92 ALIGNMENT 0 YS2-6f04.p1k chr12 578 62 1790 1789 C 517 0.00 1405 reject_low 231 ALIGNMENT 41 YS2-6f04.p1k chr15 837 926 1089229 1089318 F 90 82.22 1405 reject_low 284 ALIGNMENT 82 YS2-6f04.p1k chr04 589 757 1530320 1530488 F 169 82.84 1405 reject_low 207 ALIGNMENT 0 YS2-6f04.p1k chr04 62 588 1530140 1530139 F 527 0.00 1405 reject_low 23 ALIGNMENT 39 YS2-6f04.q1k chr02 563 662 2170 2269 F 100 81.00 1416 reject_low 72 ALIGNMENT 79 YS2-6f04.p1k chr14 926 729 1801 1998 C 198 80.30 1405 reject_low 106 ALIGNMENT 35 YS2-6f04.q1k chr16 626 563 946323 946386 C 64 85.94 1416 reject_low 59 ALIGNMENT 52 YS2-6f04.p1k chr10 926 709 2148 2365 C 218 74.77 1405 reject_low 130 ALIGNMENT 0 YS2-6f04.p1k chr10 845 826 1674 1673 C 20 0.00 1405 reject_low 139 ALIGNMENT 0 YS2-6f04.p1k chr08 62 588 560493 560492 F 527 0.00 1405 reject_low 20 ALIGNMENT 0 YS2-6f04.p1k chr10 691 62 2287 2286 C 630 0.00 1405 reject_low 346 ALIGNMENT 29 YS2-6f04.q1k chr12 626 563 1069783 1069846 C 64 82.81 1416 reject_low 35 ALIGNMENT 0 YS2-6f04.p1k chr05 579 62 2008 2007 C 518 0.00 1405 reject_low 51 ALIGNMENT 0 YS2-6f04.p1k chr02 578 62 2169 2168 C 517 0.00 1405 reject_low 152 ALIGNMENT 37 YS2-6f04.q1k chr02 566 659 1705 1798 F 94 80.85 1416 reject_low 52 ALIGNMENT 0 YS2-6f04.p1k chr04 62 588 1530320 1530319 F 527 0.00 1405 reject_low 207 ALIGNMENT 171 YS2-6f04.p1k chr13 865 579 1667 1953 C 287 86.76 1405 reject_low 91 ALIGNMENT 150 YS2-6f04.p1k chr05 865 579 1470 1756 C 287 84.32 1405 reject_low 117 ALIGNMENT 22 YS2-6f04.p1k chr09 614 589 1685 1710 C 26 96.15 1405 reject_low 324 ALIGNMENT 91 YS2-6f04.p1k chr12 937 693 1971 2215 C 245 79.59 1405|0,9 reject_low 340 ALIGNMENT 0 YS2-6f04.p1k chr12 711 728 1070016 1076264 F 18 0.00 1405 reject_low 345 ALIGNMENT 57 YS2-6f04.q1k chr10 563 734 1957 2128 F 172 78.49 1416 reject_low 46 ALIGNMENT 0 YS2-6f04.p1k chr05 62 764 574893 574892 F 703 0.00 1405 reject_low 233 ALIGNMENT 82 YS2-6f04.p1k chr05 589 757 575149 575317 F 169 82.84 1405 reject_low 208 ALIGNMENT 79 YS2-6f04.p1k chr16 729 926 945962 946159 F 198 80.30 1405 reject_low 222 ALIGNMENT 29 YS2-6f04.q1k chr15 626 563 1089410 1089473 C 64 82.81 1416 reject_low 39 ALIGNMENT 90 YS2-6f04.p1k chr10 937 739 2029 2227 C 199 82.41 1405 reject_low 346 ALIGNMENT 20 YS2-6f04.p1k chr10 735 692 2243 2286 C 44 81.82 1405 reject_low 346 ALIGNMENT 128 YS2-6f04.p1k chr15 657 934 1089229 1089506 F 278 82.37 1405 reject_low 150 ALIGNMENT 171 YS2-6f04.p1k chr12 579 865 1076403 1076689 F 287 86.76 1405 reject_low 90 ALIGNMENT 0 YS2-6f04.p1k chr12 578 62 7361 7360 C 517 0.00 1405 reject_low 332,335,347 ALIGNMENT 457 YS2-6f04.q1k chr10 32 752 1142 1858 F 721 88.63 1416 ambiguous_tel 17 ALIGNMENT 0 YS2-6f04.p1k chr08 845 758 1652 1651 C 88 0.00 1405 reject_low 179 ALIGNMENT 0 YS2-6f04.p1k chr14 872 62 1999 1998 C 811 0.00 1405 reject_low 295 ALIGNMENT 152 YS2-6f04.p1k chr16 934 621 1594 1907 C 314 83.12 1405 reject_low 57 ALIGNMENT 198 YS2-6f04.p1k chr05 937 589 1506 1854 C 349 85.96 1405 reject_low 79 ALIGNMENT 0 YS2-6f04.p1k chr04 62 800 1530064 1530063 F 739 0.00 1405 reject_low 267 ALIGNMENT 0 YS2-6f04.p1k chr07 62 588 1089154 1089153 F 527 0.00 1405 reject_low 164 ALIGNMENT 0 YS2-6f04.p1k chr15 62 692 1089229 1089228 F 631 0.00 1405 reject_low 198 ALIGNMENT 81 YS2-6f04.p1k chr06 926 637 976 1265 C 290 76.21 1405 reject_low 216 ALIGNMENT 25 YS2-6f04.p1k chr08 614 579 1650 1685 C 36 91.67 1405 reject_low 305 ALIGNMENT 401 YS2-6f04.q1k chr06 32 626 366 956 F 595 90.08 1416 ambiguous_tel 0 ALIGNMENT 0 YS2-6f04.p1k chr12 845 615 1683 1682 C 231 0.00 1405 reject_low 307 ALIGNMENT 0 YS2-6f04.p1k chr14 845 758 1575 1574 C 88 0.00 1405 reject_low 213 ALIGNMENT 674 YS2-6f04.p1k chr05 937 22 1686 2614 C 916 91.27 1405 ambiguous_tel 13 ALIGNMENT 0 YS2-6f04.p1k chr16 794 845 946494 946493 F 52 0.00 1405 reject_low 154 ALIGNMENT 0 YS2-6f04.p1k chr13 588 62 1836 1835 C 527 0.00 1405 reject_low 212 ALIGNMENT 0 YS2-6f04.p1k chr10 845 711 1681 1680 C 135 0.00 1405 reject_low 219 ALIGNMENT 0 YS2-6f04.p1k chr12 62 588 1069786 1069785 F 527 0.00 1405 reject_low 336 ALIGNMENT 0 YS2-6f04.p1k chr12 758 845 1076689 1076688 F 88 0.00 1405 reject_low 211 ALIGNMENT 0 YS2-6f04.p1k chr16 62 588 946182 946181 F 527 0.00 1405 reject_low 78 ALIGNMENT 52 YS2-6f04.p1k chr10 685 579 1669 1775 C 107 83.18 1405 reject_low 266 ALIGNMENT 89 YS2-6f04.p1k chr10 757 587 1669 1839 C 171 84.21 1405 reject_low 195 ALIGNMENT 88 YS2-6f04.p1k chr09 937 677 2118 2378 C 261 78.54 1405 reject_low 201 ALIGNMENT 0 YS2-6f04.p1k chr15 615 845 1089654 1089653 F 231 0.00 1405 reject_low 311 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 1924 1923 C 527 0.00 1405 reject_low 121 ALIGNMENT 70 YS2-6f04.p1k chr10 710 579 1680 1811 C 132 84.85 1405 reject_low 219 ALIGNMENT 29 YS2-6f04.q1k chr16 563 626 1663 1726 F 64 82.81 1416 reject_low 107 ALIGNMENT 0 YS2-6f04.p1k chr16 62 586 946360 946359 F 525 0.00 1405 reject_low 229 ALIGNMENT 25 YS2-6f04.p1k chr07 579 614 1089360 1089395 F 36 91.67 1405 reject_low 304 ALIGNMENT 49 YS2-6f04.q1k chr08 659 563 560709 560805 C 97 84.54 1416 reject_low 20 ALIGNMENT 0 YS2-6f04.p1k chr08 62 656 560417 560416 F 595 0.00 1405 reject_low 119 ALIGNMENT 0 YS2-6f04.p1k chr08 830 62 1938 1937 C 769 0.00 1405 reject_low 299 ALIGNMENT 433 YS2-6f04.q1k chr12 32 752 6799 7515 F 721 87.52 1416 reject_low 18 ALIGNMENT 128 YS2-6f04.p1k chr12 657 934 1069602 1069879 F 278 82.37 1405 reject_low 149 ALIGNMENT 0 YS2-6f04.p1k chr10 845 686 1670 1669 C 160 0.00 1405 reject_low 266 ALIGNMENT 88 YS2-6f04.p1k chr10 937 677 2101 2361 C 261 78.54 1405 reject_low 82 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 7567 7566 C 527 0.00 1405 reject_low 334 ALIGNMENT 0 YS2-6f04.p1k chr12 62 764 1069602 1069601 F 703 0.00 1405 reject_low 254 ALIGNMENT 0 YS2-6f04.p1k chr04 62 578 1530454 1530453 F 517 0.00 1405 reject_low 301 ALIGNMENT 0 YS2-6f04.p1k chr10 588 62 2162 2161 C 527 0.00 1405 reject_low 96 ALIGNMENT 131 YS2-6f04.p1k chr16 934 657 1630 1907 C 278 82.73 1405 reject_low 145 ALIGNMENT 105 YS2-6f04.p1k chr12 589 793 1076485 1076689 F 205 83.90 1405 reject_low 174 ALIGNMENT 212 YS2-6f04.p1k chr02 937 587 1918 2268 C 351 87.18 1405 reject_low 70 ALIGNMENT 91 YS2-6f04.p1k chr05 693 937 574893 575137 F 245 79.59 1405 reject_low 185 ALIGNMENT 0 YS2-6f04.p1k chr02 728 62 2415 2414 C 667 0.00 1405 reject_low 72 ALIGNMENT 0 YS2-6f04.p1k chr07 711 845 1089383 1089382 F 135 0.00 1405 reject_low 246 ALIGNMENT 49 YS2-6f04.q1k chr14 563 659 1610 1706 F 97 84.54 1416 reject_low 56 ALIGNMENT 0 YS2-6f04.p1k chr10 586 62 1840 1839 C 525 0.00 1405 reject_low 195 ALIGNMENT 0 YS2-6f04.p1k chr09 845 794 1687 1686 C 52 0.00 1405 reject_low 157 ALIGNMENT 439 YS2-6f04.q1k chr07 752 32 1089205 1089921 C 721 87.79 1416 ambiguous_tel 2 ALIGNMENT 0 YS2-6f04.p1k chr15 62 836 1089229 1089228 F 775 0.00 1405 reject_low 284 ALIGNMENT 0 YS2-6f04.p1k chr08 62 836 560417 560416 F 775 0.00 1405 reject_low 315 ALIGNMENT 0 YS2-6f04.p1k chr02 845 666 1831 1830 C 180 0.00 1405 reject_low 217 ALIGNMENT 67 YS2-6f04.p1k chr12 938 765 7577 7750 C 174 80.46 1405 reject_low 235 ALIGNMENT 0 YS2-6f04.p1k chr05 708 62 2059 2058 C 647 0.00 1405 reject_low 227 ALIGNMENT 0 YS2-6f04.p1k chr13 588 62 1908 1907 C 527 0.00 1405 reject_low 166 ALIGNMENT 0 YS2-6f04.p1k chr05 62 692 574893 574892 F 631 0.00 1405 reject_low 185 ALIGNMENT 152 YS2-6f04.p1k chr13 934 621 1778 2091 C 314 83.12 1405 reject_low 55 ALIGNMENT 0 YS2-6f04.p1k chr06 578 62 1000 999 C 517 0.00 1405 reject_low 204 ALIGNMENT 0 YS2-6f04.p1k chr10 738 736 2228 2242 C 3 0.00 1405 reject_low 346 ALIGNMENT 0 YS2-6f04.p1k chr04 62 656 1530064 1530063 F 595 0.00 1405 reject_low 148 ALIGNMENT 25 YS2-6f04.p1k chr05 579 614 575283 575318 F 36 91.67 1405 reject_low 303 ALIGNMENT 60 YS2-6f04.p1k chr16 937 801 1771 1907 C 137 81.75 1405 reject_low 262 ALIGNMENT 132 YS2-6f04.p1k chr08 793 589 1651 1855 C 205 88.29 1405 reject_low 147 ALIGNMENT 165 YS2-6f04.p1k chr05 937 580 1650 2007 C 358 82.40 1405 reject_low 51 ALIGNMENT 0 YS2-6f04.p1k chr12 62 578 1076655 1076654 F 517 0.00 1405 reject_low 308 ALIGNMENT 21 YS2-6f04.q1k chr08 590 563 560562 560589 C 28 92.86 1416 reject_low 69 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 1960 1959 C 527 0.00 1405 reject_low 137 ALIGNMENT 0 YS2-6f04.p1k chr02 656 62 2415 2414 C 595 0.00 1405 reject_low 45 ALIGNMENT 43 YS2-6f04.p1k chr05 938 785 1901 2054 C 154 77.27 1405 reject_low 274 ALIGNMENT 32 YS2-6f04.q1k chr06 563 626 1001 1064 F 64 84.38 1416 reject_low 132 ALIGNMENT 0 YS2-6f04.p1k chr06 676 62 1262 1261 C 615 0.00 1405 reject_low 200 ALIGNMENT 82 YS2-6f04.p1k chr02 926 729 2217 2414 C 198 80.81 1405 reject_low 72 ALIGNMENT 735 YS2-6f04.p1k chr12 937 22 7362 8302 C 916 93.56 1405 ambiguous_tel 4 ALIGNMENT 0 YS2-6f04.p1k chr08 615 845 560842 560841 F 231 0.00 1405 reject_low 306 ALIGNMENT 0 YS2-6f04.p1k chr12 62 578 1069992 1069991 F 517 0.00 1405 reject_low 333,338,348 ALIGNMENT 25 YS2-6f04.p1k chr08 579 614 560807 560842 F 36 91.67 1405 reject_low 306 ALIGNMENT 732 YS2-6f04.p1k chr15 22 937 1088677 1089617 F 916 93.56 1405 ambiguous_tel 10 ALIGNMENT 0 YS2-6f04.p1k chr16 62 764 945962 945961 F 703 0.00 1405 reject_low 239 ALIGNMENT 735 YS2-6f04.p1k chr13 937 22 1703 2643 C 916 93.56 1405 ambiguous_tel 11 ALIGNMENT 0 YS2-6f04.p1k chr13 620 62 2092 2091 C 559 0.00 1405 reject_low 55 ALIGNMENT 63 YS2-6f04.p1k chr08 685 587 1651 1749 C 99 87.88 1405 reject_low 256 ALIGNMENT 141 YS2-6f04.p1k chr08 589 901 560529 560841 F 313 81.79 1405 reject_low 133 ALIGNMENT 0 YS2-6f04.p1k chr08 845 615 1651 1650 C 231 0.00 1405 reject_low 305 ALIGNMENT 246 YS2-6f04.p1k chr05 937 579 1578 1936 C 359 89.97 1405 reject_low 44 ALIGNMENT 0 YS2-6f04.p1k chr09 845 639 1698 1697 C 207 0.00 1405 reject_low 319 ALIGNMENT 0 YS2-6f04.p1k chr12 814 813 1070011 1076277 F 0 0.00 1405 reject_low 336 ALIGNMENT 439 YS2-6f04.q1k chr16 32 752 956 1672 F 721 87.79 1416 ambiguous_tel 3 ALIGNMENT 434 YS2-6f04.q1k chr02 32 638 959 1561 F 607 91.43 1416 ambiguous_tel 15 ALIGNMENT 29 YS2-6f04.q1k chr14 563 626 1754 1817 F 64 82.81 1416 reject_low 106 ALIGNMENT 60 YS2-6f04.p1k chr14 937 801 1862 1998 C 137 81.75 1405 reject_low 261 ALIGNMENT 0 YS2-6f04.p1k chr08 62 728 560417 560416 F 667 0.00 1405 reject_low 206 ALIGNMENT 141 YS2-6f04.p1k chr08 901 652 1651 1900 C 250 85.60 1405 reject_low 135 ALIGNMENT 0 YS2-6f04.p1k chr06 588 62 1062 1061 C 527 0.00 1405 reject_low 203 ALIGNMENT 0 YS2-6f04.p1k chr04 711 845 1530477 1530476 F 135 0.00 1405 reject_low 244 ALIGNMENT 29 YS2-6f04.q1k chr12 626 563 1076446 1076509 C 64 82.81 1416 reject_low 37 ALIGNMENT 0 YS2-6f04.p1k chr09 578 62 2225 2224 C 517 0.00 1405 reject_low 48,58 ALIGNMENT 0 YS2-6f04.p1k chr10 676 62 2362 2361 C 615 0.00 1405 reject_low 82 ALIGNMENT 66 YS2-6f04.p1k chr02 937 765 2242 2414 C 173 80.35 1405 reject_low 240 ALIGNMENT 66 YS2-6f04.p1k chr08 765 937 560417 560589 F 173 80.35 1405 reject_low 241 ALIGNMENT 0 YS2-6f04.p1k chr02 588 62 2303 2302 C 527 0.00 1405 reject_low 126 ALIGNMENT 0 YS2-6f04.p1k chr10 586 62 1876 1875 C 525 0.00 1405 reject_low 158 ALIGNMENT 0 YS2-6f04.p1k chr12 62 588 1076377 1076376 F 527 0.00 1405 reject_low 110 ALIGNMENT 0 YS2-6f04.p1k chr04 62 588 1530356 1530355 F 527 0.00 1405 reject_low 244 ALIGNMENT 81 YS2-6f04.p1k chr08 937 687 1687 1937 C 251 78.09 1405 reject_low 205 ALIGNMENT 0 YS2-6f04.p1k chr06 845 686 894 893 C 160 0.00 1405 reject_low 204 ALIGNMENT 0 YS2-6f04.p1k chr07 62 836 1088970 1088969 F 775 0.00 1405 reject_low 279 ALIGNMENT 0 YS2-6f04.p1k chr16 588 62 1796 1795 C 527 0.00 1405 reject_low 103 ALIGNMENT 0 YS2-6f04.p1k chr16 62 588 946038 946037 F 527 0.00 1405 reject_low 59 ALIGNMENT 0 YS2-6f04.p1k chr04 62 872 1530064 1530063 F 811 0.00 1405 reject_low 289 ALIGNMENT 0 YS2-6f04.p1k chr07 62 728 1088970 1088969 F 667 0.00 1405 reject_low 221 ALIGNMENT 100 YS2-6f04.p1k chr05 757 589 1470 1638 C 169 86.39 1405 reject_low 180 ALIGNMENT 0 YS2-6f04.p1k chr09 845 826 1691 1690 C 20 0.00 1405 reject_low 138 ALIGNMENT 105 YS2-6f04.p1k chr07 589 793 1089190 1089394 F 205 83.90 1405 reject_low 172 ALIGNMENT 0 YS2-6f04.p1k chr16 62 588 946326 946325 F 527 0.00 1405 reject_low 184 ALIGNMENT 53 YS2-6f04.q1k chr09 563 697 1758 1892 F 135 80.74 1416 reject_low 43 ALIGNMENT 67 YS2-6f04.p1k chr16 765 938 945962 946135 F 174 80.46 1405 reject_low 239 ALIGNMENT 0 YS2-6f04.p1k chr07 62 872 1088970 1088969 F 811 0.00 1405 reject_low 291 ALIGNMENT 0 YS2-6f04.p1k chr16 686 845 946494 946493 F 160 0.00 1405 reject_low 232 ALIGNMENT 0 YS2-6f04.p1k chr08 845 794 1652 1651 C 52 0.00 1405 reject_low 147 ALIGNMENT 0 YS2-6f04.p1k chr09 579 62 2332 2331 C 518 0.00 1405 reject_low 68 ALIGNMENT 26 YS2-6f04.q1k chr08 563 626 1759 1822 F 64 81.25 1416 reject_low 155 ALIGNMENT 0 YS2-6f04.p1k chr10 578 62 1776 1775 C 517 0.00 1405 reject_low 266 ALIGNMENT 0 YS2-6f04.p1k chr02 588 62 2195 2194 C 527 0.00 1405 reject_low 42,49,52,53 ALIGNMENT 0 YS2-6f04.p1k chr05 62 872 574893 574892 F 811 0.00 1405 reject_low 290 ALIGNMENT 0 YS2-6f04.p1k chr12 813 814 2203 7341 C 0 0.00 1405 reject_low 334 ALIGNMENT 38 YS2-6f04.p1k chr10 938 764 2172 2346 C 175 74.86 1405 reject_low 288 ALIGNMENT 76 YS2-6f04.p1k chr15 729 926 1089229 1089426 F 198 79.80 1405 reject_low 226 ALIGNMENT 297 YS2-6f04.p1k chr12 589 1052 1076341 1076804 F 464 88.58 1405 reject_low 40 ALIGNMENT 305 YS2-6f04.p1k chr15 589 1060 1089305 1089776 F 472 88.77 1405 reject_low 38,39 ALIGNMENT 25 YS2-6f04.p1k chr12 579 614 1076655 1076690 F 36 91.67 1405 reject_low 308 ALIGNMENT 0 YS2-6f04.p1k chr12 800 794 2216 7325 C 7 0.00 1405 reject_low 337 ALIGNMENT 165 YS2-6f04.p1k chr10 937 589 1813 2161 C 349 82.81 1405 reject_low 96 ALIGNMENT 0 YS2-6f04.p1k chr02 588 62 2123 2122 C 527 0.00 1405 reject_low 136 ALIGNMENT 0 YS2-6f04.p1k chr05 62 588 575005 575004 F 527 0.00 1405 reject_low 98 ALIGNMENT 25 YS2-6f04.p1k chr13 614 579 1666 1701 C 36 91.67 1405 reject_low 309 ALIGNMENT 91 YS2-6f04.p1k chr14 937 693 1754 1998 C 245 79.59 1405 reject_low 189 ALIGNMENT 25 YS2-6f04.p1k chr12 579 614 1069992 1070027 F 36 91.67 1405 reject_low 333,338,348 ALIGNMENT 0 YS2-6f04.p1k chr14 845 794 1575 1574 C 52 0.00 1405 reject_low 176 ALIGNMENT 0 YS2-6f04.p1k chr05 636 62 2059 2058 C 575 0.00 1405 reject_low 120 ALIGNMENT 0 YS2-6f04.p1k chr14 728 62 1999 1998 C 667 0.00 1405 reject_low 106 ALIGNMENT 0 YS2-6f04.p1k chr05 62 578 575283 575282 F 517 0.00 1405 reject_low 303 ALIGNMENT 0 YS2-6f04.p1k chr16 758 845 946494 946493 F 88 0.00 1405 reject_low 184 ALIGNMENT 0 YS2-6f04.p1k chr12 62 620 1069602 1069601 F 559 0.00 1405 reject_low 128 ALIGNMENT 0 YS2-6f04.p1k chr09 578 62 1829 1828 C 517 0.00 1405 reject_low 218 ALIGNMENT 33 YS2-6f04.p1k chr16 873 938 945962 946027 F 66 83.33 1405 reject_low 298 ALIGNMENT 0 YS2-6f04.p1k chr08 588 62 1784 1783 C 527 0.00 1405 reject_low 230 ALIGNMENT 0 YS2-6f04.p1k chr07 758 845 1089394 1089393 F 88 0.00 1405 reject_low 209 ALIGNMENT 204 YS2-6f04.p1k chr16 589 937 946038 946386 F 349 86.53 1405 reject_low 59 ALIGNMENT 0 YS2-6f04.p1k chr10 636 62 2366 2365 C 575 0.00 1405 reject_low 46 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 1852 1851 C 527 0.00 1405 reject_low 183 ALIGNMENT 0 YS2-6f04.p1k chr10 579 62 2315 2314 C 518 0.00 1405 reject_low 61 ALIGNMENT 0 YS2-6f04.p1k chr14 578 62 1861 1860 C 517 0.00 1405 reject_low 92 ALIGNMENT 114 YS2-6f04.p1k chr08 579 825 560591 560837 F 247 82.59 1405 reject_low 156 ALIGNMENT 363 YS2-6f04.p1k chr05 1152 579 1251 1828 C 574 88.50 1405 reject_low 25 ALIGNMENT 0 YS2-6f04.p1k chr08 62 800 560417 560416 F 739 0.00 1405 reject_low 271 ALIGNMENT 146 YS2-6f04.p1k chr02 938 589 1953 2302 C 350 80.86 1405 reject_low 126 ALIGNMENT 0 YS2-6f04.p1k chr12 845 826 1688 1687 C 20 0.00 1405 reject_low 121 ALIGNMENT 54 YS2-6f04.p1k chr08 801 937 560417 560553 F 137 80.29 1405 reject_low 271 ALIGNMENT 0 YS2-6f04.p1k chr14 692 62 1999 1998 C 631 0.00 1405 reject_low 189 ALIGNMENT 0 YS2-6f04.p1k chr05 758 845 575317 575316 F 88 0.00 1405 reject_low 208 ALIGNMENT 0 YS2-6f04.p1k chr02 692 62 2415 2414 C 631 0.00 1405 reject_low 181 ALIGNMENT 111 YS2-6f04.p1k chr15 589 825 1089413 1089649 F 237 82.70 1405 reject_low 168 ALIGNMENT 0 YS2-6f04.p1k chr12 62 588 1069678 1069677 F 527 0.00 1405 reject_low 32,33,35,36,37 ALIGNMENT 131 YS2-6f04.p1k chr14 934 657 1721 1998 C 278 82.73 1405 reject_low 144 ALIGNMENT 0 YS2-6f04.p1k chr12 62 588 1076557 1076556 F 527 0.00 1405 reject_low 248 ALIGNMENT 41 YS2-6f04.p1k chr14 926 837 1909 1998 C 90 82.22 1405 reject_low 283 ALIGNMENT 0 YS2-6f04.p1k chr05 578 62 1937 1936 C 517 0.00 1405 reject_low 44 ALIGNMENT 131 YS2-6f04.p1k chr13 934 657 1814 2091 C 278 82.73 1405 reject_low 143 ALIGNMENT 97 YS2-6f04.p1k chr12 757 589 1683 1851 C 169 85.80 1405 reject_low 183 ALIGNMENT 120 YS2-6f04.p1k chr02 917 579 1830 2168 C 339 78.76 1405 reject_low 152 ALIGNMENT 0 YS2-6f04.p1k chr06 845 651 893 892 C 195 0.00 1405 reject_low 275 ALIGNMENT 0 YS2-6f04.p1k chr16 872 62 1908 1907 C 811 0.00 1405 reject_low 297 ALIGNMENT 0 YS2-6f04.p1k chr12 62 578 1076403 1076402 F 517 0.00 1405 reject_low 90 ALIGNMENT 0 YS2-6f04.p1k chr08 578 62 1686 1685 C 517 0.00 1405 reject_low 305 ALIGNMENT 0 YS2-6f04.p1k chr09 586 62 1893 1892 C 525 0.00 1405 reject_low 157 ALIGNMENT 29 YS2-6f04.q1k chr07 626 563 1089151 1089214 C 64 82.81 1416 reject_low 66 ALIGNMENT 0 YS2-6f04.p1k chr15 62 588 1089449 1089448 F 527 0.00 1405 reject_low 177 ALIGNMENT 204 YS2-6f04.p1k chr16 589 901 946182 946494 F 313 88.50 1405 reject_low 78 ALIGNMENT 0 YS2-6f04.p1k chr08 711 845 560830 560829 F 135 0.00 1405 reject_low 247 ALIGNMENT 0 YS2-6f04.p1k chr09 763 62 2364 2363 C 702 0.00 1405 reject_low 287 ALIGNMENT 146 YS2-6f04.p1k chr02 938 579 1881 2240 C 360 80.56 1405 reject_low 116 ALIGNMENT 0 YS2-6f04.p1k chr08 62 588 560529 560528 F 527 0.00 1405 reject_low 133 ALIGNMENT 162 YS2-6f04.p1k chr12 589 901 1076377 1076689 F 313 84.03 1405 reject_low 110 ALIGNMENT 35 YS2-6f04.q1k chr02 563 626 2242 2305 F 64 85.94 1416 reject_low 115 ALIGNMENT 54 YS2-6f04.p1k chr02 937 801 2278 2414 C 137 80.29 1405 reject_low 115 ALIGNMENT 301 YS2-6f04.p1k chr08 1152 667 1432 1921 C 486 88.07 1405 reject_low 31 ALIGNMENT 158 YS2-6f04.p1k chr16 621 937 945962 946278 F 317 83.60 1405 reject_low 113 ALIGNMENT 49 YS2-6f04.q1k chr12 659 563 1069894 1069990 C 97 84.54 1416 reject_low 32 ALIGNMENT 60 YS2-6f04.p1k chr13 937 801 1955 2091 C 137 81.75 1405 reject_low 260 ALIGNMENT 41 YS2-6f04.p1k chr05 837 926 574893 574982 F 90 82.22 1405 reject_low 278 ALIGNMENT 113 YS2-6f04.p1k chr06 901 580 893 1214 C 322 78.57 1405 reject_low 159 ALIGNMENT 0 YS2-6f04.p1k chr02 845 810 1831 1830 C 36 0.00 1405 reject_low 242 ALIGNMENT 33 YS2-6f04.p1k chr12 873 938 1076265 1076330 F 66 83.33 1405 reject_low 331 ALIGNMENT 97 YS2-6f04.p1k chr02 937 693 2170 2414 C 245 80.41 1405 reject_low 181 ALIGNMENT 97 YS2-6f04.p1k chr05 937 637 1758 2058 C 301 77.74 1405 reject_low 120 ALIGNMENT 0 YS2-6f04.p1k chr09 845 686 1687 1686 C 160 0.00 1405 reject_low 265 ALIGNMENT 82 YS2-6f04.p1k chr08 729 926 560417 560614 F 198 80.81 1405 reject_low 206 ALIGNMENT 88 YS2-6f04.p1k chr06 937 677 1001 1261 C 261 78.54 1405 reject_low 200 ALIGNMENT 171 YS2-6f04.p1k chr12 579 865 1069740 1070026 F 287 86.76 1405 reject_low 331 ALIGNMENT 0 YS2-6f04.p1k chr16 764 62 1908 1907 C 703 0.00 1405 reject_low 238 ALIGNMENT 0 YS2-6f04.p1k chr12 872 62 7751 7750 C 811 0.00 1405 reject_low 292 ALIGNMENT 0 YS2-6f04.p1k chr13 728 62 2092 2091 C 667 0.00 1405 reject_low 105 ALIGNMENT 0 YS2-6f04.p1k chr12 845 758 1684 1683 C 88 0.00 1405 reject_low 183 ALIGNMENT 192 YS2-6f04.p1k chr05 937 589 1542 1890 C 349 85.39 1405 reject_low 83 ALIGNMENT 0 YS2-6f04.p1k chr08 845 686 1652 1651 C 160 0.00 1405 reject_low 256 ALIGNMENT 29 YS2-6f04.q1k chr05 626 563 575074 575137 C 64 82.81 1416 reject_low 65 ALIGNMENT 0 YS2-6f04.p1k chr14 836 62 1999 1998 C 775 0.00 1405 reject_low 283 ALIGNMENT 439 YS2-6f04.q1k chr12 752 32 1076500 1077216 C 721 87.79 1416 ambiguous_tel 9 ALIGNMENT 105 YS2-6f04.p1k chr04 589 793 1530284 1530488 F 205 83.90 1405 reject_low 170 ALIGNMENT 0 YS2-6f04.p1k chr05 763 62 2040 2039 C 702 0.00 1405 reject_low 273 ALIGNMENT 91 YS2-6f04.p1k chr12 937 693 7506 7750 C 245 79.59 1405 reject_low 187 ALIGNMENT 0 YS2-6f04.p1k chr08 763 62 1933 1932 C 702 0.00 1405 reject_low 112 ALIGNMENT 152 YS2-6f04.p1k chr14 934 621 1685 1998 C 314 83.12 1405 reject_low 56 ALIGNMENT 0 YS2-6f04.p1k chr14 845 711 1586 1585 C 135 0.00 1405 reject_low 250 ALIGNMENT 0 YS2-6f04.p1k chr13 578 62 1702 1701 C 517 0.00 1405 reject_low 309 ALIGNMENT 0 YS2-6f04.p1k chr12 62 588 1069894 1069893 F 527 0.00 1405 reject_low 341,345 ALIGNMENT 52 YS2-6f04.p1k chr09 926 709 2165 2382 C 218 74.77 1405 reject_low 272 ALIGNMENT 0 YS2-6f04.p1k chr04 62 728 1530064 1530063 F 667 0.00 1405 reject_low 224 ALIGNMENT 53 YS2-6f04.q1k chr05 563 661 1614 1712 F 99 85.86 1416 reject_low 51 ALIGNMENT 0 YS2-6f04.p1k chr09 588 62 1711 1710 C 527 0.00 1405 reject_low 324 ALIGNMENT 57 YS2-6f04.p1k chr12 801 937 1069602 1069738 F 137 81.02 1405 reject_low 268 ALIGNMENT 49 YS2-6f04.q1k chr04 659 563 1530356 1530452 C 97 84.54 1416 reject_low 23 ALIGNMENT 162 YS2-6f04.p1k chr15 589 901 1089341 1089653 F 313 84.03 1405 reject_low 111 ALIGNMENT 0 YS2-6f04.p1k chr10 588 62 1694 1693 C 527 0.00 1405 reject_low 325 ALIGNMENT 111 YS2-6f04.p1k chr04 589 825 1530248 1530484 F 237 82.70 1405 reject_low 162 ALIGNMENT 159 YS2-6f04.p1k chr16 589 825 946254 946490 F 237 89.45 1405 reject_low 118 ALIGNMENT 73 YS2-6f04.p1k chr08 710 589 1662 1783 C 122 86.89 1405 reject_low 230 ALIGNMENT 0 YS2-6f04.p1k chr04 794 845 1530488 1530487 F 52 0.00 1405 reject_low 170 ALIGNMENT 20 YS2-6f04.q1k chr05 563 589 1686 1712 F 27 92.59 1416 reject_low 120 ALIGNMENT 82 YS2-6f04.p1k chr16 757 589 1483 1651 C 169 82.84 1405 reject_low 215 ALIGNMENT 0 YS2-6f04.p1k chr07 62 588 1089262 1089261 F 527 0.00 1405 reject_low 246 ALIGNMENT 0 YS2-6f04.p1k chr05 588 62 1567 1566 C 527 0.00 1405 reject_low 270 ALIGNMENT 43 YS2-6f04.p1k chr06 650 589 892 953 C 62 90.32 1405 reject_low 275 ALIGNMENT 105 YS2-6f04.p1k chr16 793 589 1483 1687 C 205 83.90 1405 reject_low 178 ALIGNMENT 732 YS2-6f04.p1k chr04 22 937 1529512 1530452 F 916 93.56 1405 ambiguous_tel 7 ALIGNMENT 0 YS2-6f04.p1k chr09 588 62 2179 2178 C 527 0.00 1405 reject_low 95 ALIGNMENT 25 YS2-6f04.p1k chr04 579 614 1530454 1530489 F 36 91.67 1405 reject_low 301 ALIGNMENT 439 YS2-6f04.q1k chr04 752 32 1530299 1531015 C 721 87.79 1416 ambiguous_tel 7 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 2140 2139 C 527 0.00 1405 reject_low 74 ALIGNMENT 0 YS2-6f04.p1k chr12 620 62 7751 7750 C 559 0.00 1405 reject_low 54 ALIGNMENT 0 YS2-6f04.p1k chr14 588 62 1923 1922 C 527 0.00 1405 reject_low 27 ALIGNMENT 0 YS2-6f04.p1k chr16 62 578 946460 946459 F 517 0.00 1405 reject_low 313 ALIGNMENT 0 YS2-6f04.p1k chr05 588 62 1639 1638 C 527 0.00 1405 reject_low 180 ALIGNMENT 26 YS2-6f04.q1k chr02 563 626 2278 2341 F 64 81.25 1416 reject_low 161 ALIGNMENT 29 YS2-6f04.q1k chr12 563 626 2079 2142 F 64 82.81 1416 reject_low 330 ALIGNMENT 114 YS2-6f04.p1k chr16 579 793 946280 946494 F 215 84.65 1405 reject_low 154 ALIGNMENT 29 YS2-6f04.p1k chr10 638 594 1680 1724 C 45 88.89 1405 reject_low 320 ALIGNMENT 67 YS2-6f04.p1k chr12 589 710 1069894 1070015 F 122 85.25 1405|0,9 reject_low 341,345 ALIGNMENT 357 YS2-6f04.p1k chr14 1152 589 1355 1922 C 564 88.48 1405 reject_low 27 ALIGNMENT 0 YS2-6f04.p1k chr08 845 711 1663 1662 C 135 0.00 1405 reject_low 230 ALIGNMENT 0 YS2-6f04.p1k chr16 62 620 945962 945961 F 559 0.00 1405 reject_low 113 ALIGNMENT 76 YS2-6f04.p1k chr12 729 926 1076265 1076462 F 198 79.80 1405 reject_low 345 ALIGNMENT 0 YS2-6f04.p1k chr12 615 656 1070028 1076264 F 42 0.00 1405 reject_low 338 ALIGNMENT 0 YS2-6f04.p1k chr15 62 588 1089521 1089520 F 527 0.00 1405 reject_low 251 ALIGNMENT 0 YS2-6f04.p1k chr08 62 764 560417 560416 F 703 0.00 1405 reject_low 241 ALIGNMENT 82 YS2-6f04.p1k chr12 757 589 7326 7494 C 169 82.84 1405 reject_low 342 ALIGNMENT 0 YS2-6f04.p1k chr16 588 62 1832 1831 C 527 0.00 1405 reject_low 28 ALIGNMENT 41 YS2-6f04.p1k chr16 837 926 945962 946051 F 90 82.22 1405 reject_low 286 ALIGNMENT 38 YS2-6f04.p1k chr09 938 764 2189 2363 C 175 74.86 1405 reject_low 287 ALIGNMENT 0 YS2-6f04.p1k chr10 578 62 2208 2207 C 517 0.00 1405 reject_low 47,50 ALIGNMENT 439 YS2-6f04.q1k chr12 752 32 1069837 1070553 C 721 87.79 1416 ambiguous_tel 8 ALIGNMENT 79 YS2-6f04.p1k chr16 926 729 1710 1907 C 198 80.30 1405 reject_low 107 ALIGNMENT 41 YS2-6f04.p1k chr04 837 926 1530064 1530153 F 90 82.22 1405 reject_low 277 ALIGNMENT 49 YS2-6f04.q1k chr15 659 563 1089521 1089617 C 97 84.54 1416 reject_low 38 ALIGNMENT 0 YS2-6f04.p1k chr10 593 62 1725 1724 C 532 0.00 1405 reject_low 320 ALIGNMENT 0 YS2-6f04.p1k chr12 845 711 1695 1694 C 135 0.00 1405 reject_low 228 ALIGNMENT 0 YS2-6f04.p1k chr16 845 711 1495 1494 C 135 0.00 1405 reject_low 252 ALIGNMENT 322 YS2-6f04.p1k chr10 1096 589 1508 2017 C 508 88.58 1405 reject_low 34 ALIGNMENT 0 YS2-6f04.p1k chr16 728 62 1908 1907 C 667 0.00 1405 reject_low 107 ALIGNMENT 0 YS2-6f04.p1k chr12 615 836 1070028 1076264 F 222 0.00 1405 reject_low 348 ALIGNMENT 0 YS2-6f04.p1k chr07 794 845 1089394 1089393 F 52 0.00 1405 reject_low 172 ALIGNMENT 697 YS2-6f04.p1k chr08 22 937 559863 560805 F 916 92.36 1405 ambiguous_tel 14 ALIGNMENT 88 YS2-6f04.p1k chr12 693 937 1076265 1076509 F 245 79.18 1405|9,0 reject_low 341 ALIGNMENT 0 YS2-6f04.p1k chr12 588 62 1744 1743 C 527 0.00 1405 reject_low 322 ALIGNMENT 0 YS2-6f04.p1k chr02 578 62 2241 2240 C 517 0.00 1405 reject_low 116 ALIGNMENT 0 YS2-6f04.p1k chr05 784 62 2055 2054 C 723 0.00 1405 reject_low 274 ALIGNMENT 31 YS2-6f04.p1k chr08 938 883 1866 1921 C 56 85.71 1405 reject_low 314 ALIGNMENT 0 YS2-6f04.p1k chr08 586 62 1750 1749 C 525 0.00 1405 reject_low 256 ALIGNMENT 0 YS2-6f04.p1k chr13 656 62 2092 2091 C 595 0.00 1405 reject_low 143 ALIGNMENT 0 YS2-6f04.p1k chr08 666 62 1922 1921 C 605 0.00 1405 reject_low 31 ALIGNMENT 0 YS2-6f04.p1k chr04 615 845 1530489 1530488 F 231 0.00 1405 reject_low 301 ALIGNMENT 0 YS2-6f04.p1k chr09 586 62 1857 1856 C 525 0.00 1405 reject_low 194 ALIGNMENT 25 YS2-6f04.p1k chr15 579 614 1089619 1089654 F 36 91.67 1405 reject_low 311 ALIGNMENT 692 YS2-6f04.p1k chr08 865 22 1651 2499 C 844 94.08 1405 ambiguous_tel 6 ALIGNMENT 723 YS2-6f04.p1k chr12 937 22 1827 2767 C 916 93.12 1405 reject_low 19 ALIGNMENT 0 YS2-6f06.q1k vc_5 259 62 37 36 C 198 0.00 1312 reject_low 18 ALIGNMENT 38 YS2-6f06.q1k vc_7 261 298 63 100 F 38 100.00 1312 reject_low 16 ALIGNMENT 0 YS2-6f06.q1k vc_4 297 62 1535 1534 C 236 0.00 1312 reject_low 10 ALIGNMENT 64 YS2-6f06.q1k vc_7 665 508 5021 5172 C 158 82.91 1312|0,1 reject_low 11 ALIGNMENT 0 YS2-6f06.q1k vc_7 299 382 100 99 F 84 0.00 1312 reject_low 16 ALIGNMENT 248 YS2-6f06.q1k vc_3 298 665 2531 2892 F 368 90.49 1312 reject_low 4 ALIGNMENT 0 YS2-6f06.q1k vc_5 382 296 2 1 C 87 0.00 1312 reject_low 18 ALIGNMENT 0 YS2-6f06.q1k vc_3 382 299 2473 2472 C 84 0.00 1312 reject_low 14 ALIGNMENT 0 YS2-6f06.q1k vc_2 257 62 2146 2145 C 196 0.00 1312 reject_low 13 ALIGNMENT 0 YS2-6f06.p1k chr05 396 415 406837 406836 F 20 0.00 415 accept_chi 0 ALIGNMENT 248 YS2-6f06.q1k vc_2 298 665 2164 2525 F 368 90.49 1312 reject_low 3 ALIGNMENT 218 YS2-6f06.q1k chr05 257 9 406476 406724 C 249 97.59 1312 accept_chi 1 ALIGNMENT 0 YS2-6f06.q1k vc_2 62 297 2164 2163 F 236 0.00 1312 reject_low 3 ALIGNMENT 0 YS2-6f06.q1k vc_5 382 299 5026 5025 C 84 0.00 1312 reject_low 15 ALIGNMENT 0 YS2-6f06.q1k vc_2 382 299 2106 2105 C 84 0.00 1312 reject_low 13 ALIGNMENT 0 YS2-6f06.q1k vc_7 299 382 13562 13561 F 84 0.00 1312 reject_low 17 ALIGNMENT 0 YS2-6f06.q1k vc_4 62 257 5831 5830 F 196 0.00 1312 reject_low 9 ALIGNMENT 143 YS2-6f06.q1k vc_4 298 459 6353 6514 F 162 96.30 1312|1,0 reject_low 9 ALIGNMENT 39 YS2-6f06.q1k vc_5 298 260 5025 5063 C 39 100.00 1312 reject_low 15 ALIGNMENT 36 YS2-6f06.q1k vc_5 295 260 1 36 C 36 100.00 1312 reject_low 18 ALIGNMENT 41 YS2-6f06.q1k vc_2 298 258 2105 2145 C 41 100.00 1312 reject_low 13 ALIGNMENT 286 YS2-6f06.p1k chr05 72 395 406514 406837 F 324 98.15 415 accept_chi 0 ALIGNMENT 0 YS2-6f06.q1k vc_5 259 62 5064 5063 C 198 0.00 1312 reject_low 15 ALIGNMENT 0 YS2-6f06.q1k vc_1 62 297 2531 2530 F 236 0.00 1312 reject_low 2 ALIGNMENT 0 YS2-6f06.q1k vc_7 297 62 2728 2727 C 236 0.00 1312 reject_low 6 ALIGNMENT 0 YS2-6f06.q1k vc_4 62 297 126 125 F 236 0.00 1312 reject_low 8 ALIGNMENT 0 YS2-6f06.q1k vc_1 257 62 2513 2512 C 196 0.00 1312 reject_low 12 ALIGNMENT 38 YS2-6f06.q1k vc_7 261 298 13525 13562 F 38 100.00 1312 reject_low 17 ALIGNMENT 248 YS2-6f06.q1k vc_7 665 298 2366 2727 C 368 90.49 1312 reject_low 6 ALIGNMENT 41 YS2-6f06.q1k vc_4 258 298 5831 5871 F 41 100.00 1312 reject_low 9 ALIGNMENT 43 YS2-6f06.q1k vc_7 509 458 6360 6411 C 52 94.23 1312|1,0 reject_low 11 ALIGNMENT 41 YS2-6f06.q1k vc_1 298 258 2472 2512 C 41 100.00 1312 reject_low 12 ALIGNMENT 0 YS2-6f06.q1k vc_7 62 260 13525 13524 F 199 0.00 1312 reject_low 17 ALIGNMENT 82 YS2-6f06.q1k vc_4 386 298 1446 1534 C 89 97.75 1312 reject_low 10 ALIGNMENT 0 YS2-6f06.q1k vc_1 382 299 2473 2472 C 84 0.00 1312 reject_low 12 ALIGNMENT 248 YS2-6f06.q1k vc_1 298 665 2531 2892 F 368 90.49 1312 reject_low 2 ALIGNMENT 0 YS2-6f06.q1k chr05 382 258 406477 406476 C 125 0.00 1312 accept_chi 1 ALIGNMENT 0 YS2-6f06.q1k vc_7 457 62 6412 6411 C 396 0.00 1312 reject_low 11 ALIGNMENT 143 YS2-6f06.q1k vc_4 298 459 126 287 F 162 96.30 1312 reject_low 8 ALIGNMENT 241 YS2-6f06.q1k vc_4 665 298 5449 5812 C 368 89.95 1312 reject_low 7 ALIGNMENT 0 YS2-6f06.q1k vc_3 62 297 2531 2530 F 236 0.00 1312 reject_low 4 ALIGNMENT 0 YS2-6f06.q1k vc_5 62 297 2398 2397 F 236 0.00 1312 reject_low 5 ALIGNMENT 0 YS2-6f06.q1k vc_4 299 298 5872 6353 F 0 0.00 1312 reject_low 9 ALIGNMENT 248 YS2-6f06.q1k vc_5 298 665 2398 2759 F 368 90.49 1312 reject_low 5 ALIGNMENT 41 YS2-6f06.q1k vc_3 298 258 2472 2512 C 41 100.00 1312 reject_low 14 ALIGNMENT 0 YS2-6f06.q1k vc_4 297 62 5813 5812 C 236 0.00 1312 reject_low 7 ALIGNMENT 0 YS2-6f06.q1k vc_7 508 509 5172 6360 C 0 0.00 1312 reject_low 11 ALIGNMENT 0 YS2-6f06.q1k vc_7 62 260 63 62 F 199 0.00 1312 reject_low 16 ALIGNMENT 0 YS2-6f06.q1k vc_3 257 62 2513 2512 C 196 0.00 1312 reject_low 14 ALIGNMENT 960 YS2-6f07.p1k chr15 33 1158 198858 199987 F 1126 96.36 1337 accept 0 ALIGNMENT 930 YS2-6f09.p1k chr04 34 1122 767793 768900 F 1089 96.24 1297 accept 0 ALIGNMENT 667 YS2-6f09.q1k chr04 877 32 772751 773594 C 846 94.44 1536 accept 0 ALIGNMENT 313 YS2-6f10.q1k chr06 448 29 14316 14735 C 420 91.90 1506 ambiguous_tel 1 ALIGNMENT 180 YS2-6f10.q1k chr15 388 29 1691 2050 C 360 83.89 1506 reject_low 5 ALIGNMENT 367 YS2-6f10.q1k chr04 448 29 17588 18007 C 420 96.19 1506 ambiguous_tel 0 ALIGNMENT 194 YS2-6f10.q1k chr10 47 440 727771 728164 F 394 83.50 1506 reject_low 3 ALIGNMENT 0 YS2-6f10.q1k chr04 644 449 17589 17588 C 196 0.00 1506 ambiguous_tel 0 ALIGNMENT 0 YS2-6f10.q1k chr15 644 389 1692 1691 C 256 0.00 1506 reject_low 5 ALIGNMENT 0 YS2-6f10.q1k chr14 644 441 16141 16140 C 204 0.00 1506 reject_low 2 ALIGNMENT 254 YS2-6f10.q1k chr14 440 29 16140 16551 C 412 87.62 1506 reject_low 2 ALIGNMENT 0 YS2-6f10.q1k chr10 441 644 728164 728163 F 204 0.00 1506 reject_low 3 ALIGNMENT 0 YS2-6f10.q1k chr03 389 644 314933 314932 F 256 0.00 1506 reject_low 4 ALIGNMENT 198 YS2-6f10.q1k chr03 29 388 314574 314933 F 360 85.56 1506 reject_low 4 ALIGNMENT 0 YS2-6f10.q1k chr06 644 449 14317 14316 C 196 0.00 1506 ambiguous_tel 1 ALIGNMENT 642 YS2-6f11.q1k chr13 778 31 462347 463088 C 748 97.19 1468 accept 0 ALIGNMENT 907 YS2-6f11.p1k chr13 33 1045 461621 462646 F 1013 98.22 1268 accept 0 ALIGNMENT 0 YS2-6f12.p1k chr09 642 625 421202 421201 C 18 0.00 642 ambiguous_tel 0 ALIGNMENT 586 YS2-6f12.p1k chr09 624 36 421201 421789 C 589 100.00 642 ambiguous_tel 0 ALIGNMENT 564 YS2-6f12.q1k chr09 37 620 421207 421789 F 584 99.14 621 ambiguous_tel 1 ALIGNMENT 929 YS2-6f13.p1k chr04 1185 67 1068799 1069933 C 1119 96.60 1315 accept 0 ALIGNMENT 1040 YS2-6f15.p1k chr16 1272 65 265726 266943 C 1208 96.44 1288 accept 0 ALIGNMENT 683 YS2-6f15.q1k chr16 1 891 261285 262167 F 891 94.16 1215 accept 0 ALIGNMENT 739 YS2-6f16.q1k chr12 31 928 453135 454030 F 898 94.65 1332 accept 0 ALIGNMENT 739 YS2-6f16.q1k chr12 31 928 462272 463167 F 898 94.65 1332 accept 1 ALIGNMENT 1031 YS2-6f16.p1k chr12 1201 34 465606 466777 C 1168 96.66 1245 accept 1 ALIGNMENT 1031 YS2-6f16.p1k chr12 1201 34 456469 457640 C 1168 96.66 1245 accept 0 ALIGNMENT 611 YS2-6f17.q1k chr04 783 51 143989 144718 C 733 96.45 1391 accept_chi 1 ALIGNMENT 938 YS2-6f17.p1k chr02 1168 78 92590 93691 C 1091 96.70 1273 accept_chi 0 ALIGNMENT 221 YS2-6f19.q1k chr16 306 646 290626 290964 F 341 89.44 1398 accept 0 ALIGNMENT 903 YS2-6f19.p1k chr16 1169 75 294811 295890 C 1095 95.34 1406 accept 0 ALIGNMENT 414 YS2-6f20.p1k chr12 33 491 454956 455414 F 459 97.39 509 accept 0 ALIGNMENT 0 YS2-6f20.p1k chr12 492 509 464551 464550 F 18 0.00 509 accept 1 ALIGNMENT 0 YS2-6f20.p1k chr12 492 509 455414 455413 F 18 0.00 509 accept 0 ALIGNMENT 414 YS2-6f20.p1k chr12 33 491 464093 464551 F 459 97.39 509 accept 1 ALIGNMENT 116 YS2-6f22.q1k vc_4 228 389 6353 6514 F 162 90.74 1403|1,0 reject_low 8 ALIGNMENT 116 YS2-6f22.q1k vc_4 228 389 126 287 F 162 90.74 1403 reject_low 7 ALIGNMENT 177 YS2-6f22.q1k vc_3 228 623 2531 2918 F 396 83.33 1403 reject_low 3 ALIGNMENT 37 YS2-6f22.q1k vc_4 189 228 5832 5871 F 40 97.50 1403 reject_low 8 ALIGNMENT 0 YS2-6f22.q1k vc_4 229 228 5872 6353 F 0 0.00 1403 reject_low 8 ALIGNMENT 173 YS2-6f22.q1k vc_4 623 228 5423 5812 C 396 83.08 1403 reject_low 5 ALIGNMENT 36 YS2-6f22.q1k vc_5 228 190 5025 5063 C 39 97.44 1403 reject_low 13 ALIGNMENT 163 YS2-6f22.q1k vc_7 502 228 2454 2727 C 275 86.91 1403 reject_low 6 ALIGNMENT 37 YS2-6f22.q1k vc_1 228 189 2472 2511 C 40 97.50 1403 reject_low 10 ALIGNMENT 35 YS2-6f22.q1k vc_7 191 228 13525 13562 F 38 97.37 1403 reject_low 14 ALIGNMENT 65 YS2-6f22.q1k vc_4 312 228 1450 1534 C 85 92.94 1403 reject_low 9 ALIGNMENT 37 YS2-6f22.q1k vc_3 228 189 2472 2511 C 40 97.50 1403 reject_low 12 ALIGNMENT 37 YS2-6f22.q1k vc_2 228 189 2105 2144 C 40 97.50 1403 reject_low 11 ALIGNMENT 33 YS2-6f22.q1k vc_5 225 190 1 36 C 36 97.22 1403 reject_low 15 ALIGNMENT 110 YS2-6f22.q1k chr16 47 188 346558 346700 F 142 93.66 1403 accept 0 ALIGNMENT 177 YS2-6f22.q1k vc_2 228 623 2164 2551 F 396 83.33 1403 reject_low 2 ALIGNMENT 177 YS2-6f22.q1k vc_1 228 623 2531 2918 F 396 83.33 1403 reject_low 1 ALIGNMENT 177 YS2-6f22.q1k vc_5 228 623 2398 2785 F 396 83.33 1403 reject_low 4 ALIGNMENT 923 YS2-6f23.p1k chr12 1081 71 462690 463699 C 1011 97.43 1211 accept_chi 1 ALIGNMENT 923 YS2-6f23.p1k chr12 1081 71 453553 454562 C 1011 97.43 1211 accept_chi 0 ALIGNMENT 21 YS2-6f23.q1k chr10 380 350 11348 11378 C 31 100.00 1291 reject_low 3 ALIGNMENT 384 YS2-6f23.q1k chr13 678 44 192447 193069 C 635 88.98 1291 accept_chi 2 ALIGNMENT 143 YS2-6g01.p1k chr14 217 73 439047 439191 C 145 100.00 235 accept 0 ALIGNMENT 0 YS2-6g01.p1k chr14 235 218 439048 439047 C 18 0.00 235 accept 0 ALIGNMENT 459 YS2-6g02.q1k chr07 44 722 152612 153283 F 679 91.16 1499 accept 0 ALIGNMENT 961 YS2-6g02.p1k chr07 1104 34 154551 155633 C 1071 97.48 1270 accept 0 ALIGNMENT 840 YS2-6g03.p1k chr08 32 1143 14297 15428 F 1112 93.08 1299 accept 0 ALIGNMENT 663 YS2-6g03.q1k chr08 915 31 16342 17220 C 885 93.11 1384 accept 0 ALIGNMENT 170 YS2-6g04.p1k chr12 753 1122 451419 451808 F 370 84.86 1326 reject_low 1 ALIGNMENT 727 YS2-6g04.p1k chr12 34 1122 459810 460945 F 1089 91.09 1326 accept 0 ALIGNMENT 0 YS2-6g04.p1k chr12 62 752 451419 451418 F 691 0.00 1326 reject_low 1 ALIGNMENT 33 YS2-6g05.q1k vc_4 617 652 5833 5868 F 36 97.22 1309 reject_low 9 ALIGNMENT 81 YS2-6g05.q1k vc_4 743 655 1446 1534 C 89 97.75 1309 reject_low 15 ALIGNMENT 33 YS2-6g05.q1k vc_2 652 617 2108 2143 C 36 97.22 1309 reject_low 13 ALIGNMENT 0 YS2-6g05.q1k vc_5 611 62 5069 5068 C 550 0.00 1309 reject_low 11 ALIGNMENT 33 YS2-6g05.q1k vc_1 652 617 2475 2510 C 36 97.22 1309 reject_low 12 ALIGNMENT 0 YS2-6g05.q1k vc_4 654 62 1535 1534 C 593 0.00 1309 reject_low 15 ALIGNMENT 0 YS2-6g05.q1k vc_7 654 62 2728 2727 C 593 0.00 1309 reject_low 7 ALIGNMENT 0 YS2-6g05.q1k vc_1 62 654 2531 2530 F 593 0.00 1309 reject_low 2 ALIGNMENT 0 YS2-6g05.q1k vc_2 616 62 2144 2143 C 555 0.00 1309 reject_low 13 ALIGNMENT 0 YS2-6g05.q1k vc_5 62 654 2398 2397 F 593 0.00 1309 reject_low 5 ALIGNMENT 0 YS2-6g05.q1k vc_5 611 62 42 41 C 550 0.00 1309 reject_low 10 ALIGNMENT 427 YS2-6g05.p1k scplasm1 614 32 2100 2683 C 583 91.60 632 accept_chi 0 ALIGNMENT 114 YS2-6g05.q1k vc_4 655 816 6353 6514 F 162 91.36 1309 reject_low 9 ALIGNMENT 0 YS2-6g05.q1k vc_3 62 654 2531 2530 F 593 0.00 1309 reject_low 4 ALIGNMENT 157 YS2-6g05.q1k vc_2 655 966 2164 2479 F 312 85.58 1309 reject_low 3 ALIGNMENT 0 YS2-6g05.p1k scplasm1 632 615 2101 2100 C 18 0.00 632 accept_chi 0 ALIGNMENT 0 YS2-6g05.q1k vc_4 62 654 126 125 F 593 0.00 1309 reject_low 8 ALIGNMENT 114 YS2-6g05.q1k vc_4 655 816 126 287 F 162 91.36 1309 reject_low 8 ALIGNMENT 0 YS2-6g05.q1k vc_4 653 654 5869 6352 F 2 0.00 1309 reject_low 9 ALIGNMENT 0 YS2-6g05.q1k vc_2 62 654 2164 2163 F 593 0.00 1309 reject_low 3 ALIGNMENT 0 YS2-6g05.q1k vc_4 62 616 5833 5832 F 555 0.00 1309 reject_low 9 ALIGNMENT 153 YS2-6g05.q1k vc_4 966 655 5495 5812 C 312 85.26 1309 reject_low 6 ALIGNMENT 157 YS2-6g05.q1k vc_3 655 966 2531 2846 F 312 85.58 1309 reject_low 4 ALIGNMENT 157 YS2-6g05.q1k vc_5 655 966 2398 2713 F 312 85.58 1309 reject_low 5 ALIGNMENT 0 YS2-6g05.q1k vc_1 616 62 2511 2510 C 555 0.00 1309 reject_low 12 ALIGNMENT 33 YS2-6g05.q1k vc_3 652 617 2475 2510 C 36 97.22 1309 reject_low 14 ALIGNMENT 0 YS2-6g05.q1k vc_3 616 62 2511 2510 C 555 0.00 1309 reject_low 14 ALIGNMENT 38 YS2-6g05.q1k vc_5 652 612 5028 5068 C 41 97.56 1309 reject_low 11 ALIGNMENT 38 YS2-6g05.q1k vc_5 652 612 1 41 C 41 97.56 1309 reject_low 10 ALIGNMENT 151 YS2-6g05.q1k vc_7 923 655 2454 2727 C 269 87.36 1309 reject_low 7 ALIGNMENT 0 YS2-6g05.q1k vc_4 654 62 5813 5812 C 593 0.00 1309 reject_low 6 ALIGNMENT 402 YS2-6g05.q1k scplasm1 31 614 2100 2683 F 584 90.24 1309 accept_chi 1 ALIGNMENT 157 YS2-6g05.q1k vc_1 655 966 2531 2846 F 312 85.58 1309 reject_low 2 ALIGNMENT 594 YS2-6g06.p1k chr07 736 31 271884 272591 C 706 95.33 1379 accept 0 ALIGNMENT 404 YS2-6g06.p1k chr07 511 82 272107 272540 C 430 98.84 1379 reject_low 1 ALIGNMENT 0 YS2-6g06.p1k chr07 81 62 272541 272540 C 20 0.00 1379 reject_low 1 ALIGNMENT 402 YS2-6g06.q1k chr07 2 737 267350 268082 F 736 86.01 1172 accept 0 ALIGNMENT 981 YS2-6g07.p1k chr12 34 1122 464767 465851 F 1089 97.34 1369 accept 1 ALIGNMENT 981 YS2-6g07.p1k chr12 34 1122 455630 456714 F 1089 97.34 1369 accept 0 ALIGNMENT 737 YS2-6g07.q1k chr12 1043 28 465952 466957 C 1016 92.13 1349 accept 0,1 ALIGNMENT 727 YS2-6g07.q1k chr12 944 28 456907 457820 C 917 94.00 1349 reject_low 2 ALIGNMENT 324 YS2-6g09.q1k chr03 540 40 287651 288143 C 501 90.22 1451 accept 0 ALIGNMENT 925 YS2-6g09.p1k chr03 38 1104 286490 287567 F 1067 97.47 1328 accept 0 ALIGNMENT 317 YS2-6g10.q1k chr13 188 805 523908 524512 F 618 86.89 1528 accept 0 ALIGNMENT 975 YS2-6g10.p1k chr13 1159 34 525740 526876 C 1126 96.63 1354 accept 0 ALIGNMENT 89 YS2-6g11.q1k vc_7 418 305 4587 4699 C 114 93.86 1019 reject_vc 8 ALIGNMENT 0 YS2-6g11.q1k vc_7 53 54 5172 6360 C 0 0.00 1019 reject_vc 8 ALIGNMENT 48 YS2-6g11.q1k vc_4 302 238 48 112 C 65 92.31 1019 reject_low 9 ALIGNMENT 280 YS2-6g11.q1k vc_1 1 302 2689 2990 F 302 97.68 1019 reject_vc 4 ALIGNMENT 441 YS2-6g11.q1k vc_5 1 636 2556 3195 F 636 90.72 1019 reject_vc 1 ALIGNMENT 280 YS2-6g11.q1k vc_2 1 302 2322 2623 F 302 97.68 1019 reject_vc 5 ALIGNMENT 0 YS2-6g11.q1k vc_7 304 303 4700 4922 C 2 0.00 1019 reject_vc 8 ALIGNMENT 0 YS2-6g11.q1k vc_4 237 62 6340 6339 C 176 0.00 1019 reject_low 10 ALIGNMENT 362 YS2-6g11.q1k vc_4 418 1 5236 5654 C 418 95.93 1019 reject_vc 3 ALIGNMENT 201 YS2-6g11.p1k chr16 246 34 738119 738331 C 213 99.06 265 accept 0 ALIGNMENT 0 YS2-6g11.p1k chr16 265 247 738120 738119 C 19 0.00 265 accept 0 ALIGNMENT 48 YS2-6g11.q1k vc_4 238 302 1548 1612 F 65 92.31 1019 reject_vc 7 ALIGNMENT 51 YS2-6g11.q1k vc_7 54 3 6360 6411 C 52 100.00 1019|1,0 reject_vc 8 ALIGNMENT 280 YS2-6g11.q1k vc_3 1 302 2689 2990 F 302 97.68 1019 reject_vc 6 ALIGNMENT 225 YS2-6g11.q1k vc_7 302 53 4923 5172 C 250 96.80 1019|0,1 reject_vc 8 ALIGNMENT 48 YS2-6g11.q1k vc_4 302 238 6275 6339 C 65 92.31 1019 reject_low 10 ALIGNMENT 155 YS2-6g11.q1k vc_4 311 636 1882 2211 F 326 84.66 1019 reject_vc 7 ALIGNMENT 0 YS2-6g11.q1k vc_4 303 310 1613 1881 F 8 0.00 1019 reject_vc 7 ALIGNMENT 441 YS2-6g11.q1k vc_7 636 1 1930 2569 C 636 90.72 1019 reject_vc 2 ALIGNMENT 0 YS2-6g11.q1k vc_4 62 237 1548 1547 F 176 0.00 1019 reject_vc 7 ALIGNMENT 0 YS2-6g11.q1k vc_4 237 62 113 112 C 176 0.00 1019 reject_low 9 ALIGNMENT 726 YS2-6g12.q1k chr07 2 875 916570 917449 F 874 95.54 1443 accept_chi 1 ALIGNMENT 150 YS2-6g12.p1k vc_4 947 1186 5871 6112 F 240 89.17 1327 reject_low 5 ALIGNMENT 150 YS2-6g12.p1k vc_3 1186 947 1864 2105 C 240 89.17 1327 reject_low 4 ALIGNMENT 0 YS2-6g12.p1k vc_3 946 62 2106 2105 C 885 0.00 1327 reject_low 4 ALIGNMENT 0 YS2-6g12.p1k vc_1 946 62 2106 2105 C 885 0.00 1327 reject_low 2 ALIGNMENT 0 YS2-6g12.p1k vc_7 62 946 100 99 F 885 0.00 1327 reject_low 7 ALIGNMENT 150 YS2-6g12.p1k vc_2 1186 947 1864 2105 C 240 89.17 1327 reject_low 3 ALIGNMENT 0 YS2-6g12.p1k vc_2 946 62 2106 2105 C 885 0.00 1327 reject_low 3 ALIGNMENT 844 YS2-6g12.p1k chr07 928 30 916550 917449 C 899 98.89 1327 accept_chi 0 ALIGNMENT 150 YS2-6g12.p1k vc_7 947 1186 13562 13803 F 240 89.17 1327 reject_low 8 ALIGNMENT 150 YS2-6g12.p1k vc_1 1186 947 1864 2105 C 240 89.17 1327 reject_low 2 ALIGNMENT 150 YS2-6g12.p1k vc_7 947 1186 100 341 F 240 89.17 1327 reject_low 7 ALIGNMENT 0 YS2-6g12.p1k vc_5 946 62 5026 5025 C 885 0.00 1327 reject_low 6 ALIGNMENT 0 YS2-6g12.p1k vc_7 62 946 13562 13561 F 885 0.00 1327 reject_low 8 ALIGNMENT 0 YS2-6g12.p1k vc_4 62 946 5871 5870 F 885 0.00 1327 reject_low 5 ALIGNMENT 150 YS2-6g12.p1k vc_5 1186 947 4784 5025 C 240 89.17 1327 reject_low 6 ALIGNMENT 476 YS2-6g13.q1k chr02 1000 370 806360 806991 C 631 92.87 1296 ambiguous_tel 0 ALIGNMENT 645 YS2-6g13.p1k chr07 30 696 1077585 1078251 F 667 99.55 1282 ambiguous_tel 1 ALIGNMENT 470 YS2-6g13.q1k chr07 1000 370 1077620 1078251 C 631 92.55 1296 ambiguous_tel 1 ALIGNMENT 0 YS2-6g13.p1k chr02 697 844 806991 806990 F 148 0.00 1282 ambiguous_tel 0 ALIGNMENT 0 YS2-6g13.p1k chr04 62 694 1212969 1212968 F 633 0.00 1282 reject_low 3 ALIGNMENT 654 YS2-6g13.p1k chr02 30 696 806325 806991 F 667 100.00 1282 ambiguous_tel 0 ALIGNMENT 0 YS2-6g13.q1k chr04 613 372 1212970 1212969 C 242 0.00 1296 reject_low 2 ALIGNMENT 0 YS2-6g13.p1k chr09 114 62 17480 17479 C 53 0.00 1282 reject_low 4 ALIGNMENT 322 YS2-6g13.q1k chr04 371 32 1212969 1213309 C 340 99.41 1296 reject_low 2 ALIGNMENT 0 YS2-6g13.p1k chr09 844 672 16924 16923 C 173 0.00 1282 reject_low 4 ALIGNMENT 0 YS2-6g13.q1k chr07 369 62 1078252 1078251 C 308 0.00 1296 ambiguous_tel 1 ALIGNMENT 287 YS2-6g13.p1k chr04 695 1028 1212969 1213307 F 334 97.31 1282 reject_low 3 ALIGNMENT 39 YS2-6g13.q1k chr09 395 752 16923 17280 F 358 70.95 1296 reject_low 5 ALIGNMENT 60 YS2-6g13.p1k chr09 671 115 16923 17479 C 557 71.27 1282 reject_low 4 ALIGNMENT 0 YS2-6g13.q1k chr09 62 394 16923 16922 F 333 0.00 1296 reject_low 5 ALIGNMENT 0 YS2-6g13.p1k chr07 697 844 1078251 1078250 F 148 0.00 1282 ambiguous_tel 1 ALIGNMENT 0 YS2-6g13.q1k chr02 369 62 806992 806991 C 308 0.00 1296 ambiguous_tel 0 ALIGNMENT 952 YS2-6g14.p1k chr15 33 1083 690738 691791 F 1051 97.72 1290 accept 0 ALIGNMENT 664 YS2-6g14.q1k chr15 823 7 694399 695210 C 817 94.98 1274 accept 0 ALIGNMENT 668 YS2-6g15.q1k chr09 26 805 69746 70524 F 780 96.41 1296 accept 0 ALIGNMENT 992 YS2-6g15.p1k chr09 1220 30 73405 74597 C 1191 95.89 1332 accept 0 ALIGNMENT 937 YS2-6g16.p1k chr16 33 1082 914821 915886 F 1050 97.71 1282 accept 0 ALIGNMENT 667 YS2-6g16.q1k chr16 891 42 915610 916456 C 850 94.47 1310 accept 0 ALIGNMENT 1013 YS2-6g17.p1k chr12 1199 35 465508 466673 C 1165 96.05 1305 accept 1 ALIGNMENT 1013 YS2-6g17.p1k chr12 1199 35 456371 457536 C 1165 96.05 1305 accept 0 ALIGNMENT 1006 YS2-6g20.p1k chr04 26 1161 1063576 1064722 F 1136 97.36 1294 accept 0 ALIGNMENT 651 YS2-6g20.q1k chr04 1198 34 1064537 1065692 C 1165 87.04 1288 accept 0 ALIGNMENT 0 YS2-6g22.p1k chr13 836 304 372719 372718 C 533 0.00 1248 reject_low 3 ALIGNMENT 0 YS2-6g22.p1k chr10 272 836 204259 204258 F 565 0.00 1248 reject_low 14 ALIGNMENT 70 YS2-6g22.p1k chr04 46 303 1101402 1101665 F 258 78.29 1248 reject_low 2 ALIGNMENT 0 YS2-6g22.p1k chr03 304 836 151826 151825 F 533 0.00 1248 reject_low 12 ALIGNMENT 64 YS2-6g22.p1k chr13 46 303 184222 184479 F 258 77.91 1248 reject_low 7 ALIGNMENT 0 YS2-6g22.p1k chr04 304 836 1101665 1101664 F 533 0.00 1248 reject_low 2 ALIGNMENT 29 YS2-6g22.p1k chr02 178 222 9045 9089 F 45 88.89 1248 reject_low 18 ALIGNMENT 20 YS2-6g22.p1k chr13 221 179 573111 573153 C 43 83.72 1248 reject_low 20 ALIGNMENT 0 YS2-6g22.p1k chr07 62 180 701210 701209 F 119 0.00 1248 reject_low 16 ALIGNMENT 0 YS2-6g22.p1k chr07 304 836 536079 536078 F 533 0.00 1248 reject_low 5 ALIGNMENT 0 YS2-6g22.p1k chr11 208 140 302065 302122 C 69 0.00 1248 reject_low 19 ALIGNMENT 59 YS2-6g22.p1k chr10 46 303 540732 540988 F 258 77.13 1248 reject_low 10 ALIGNMENT 510 YS2-6g22.q1k chr11 53 929 214770 215619 F 877 88.94 1444 accept 0 ALIGNMENT 22 YS2-6g22.p1k chr11 276 209 301996 302064 C 68 79.41 1248 reject_low 19 ALIGNMENT 0 YS2-6g22.p1k chr13 178 140 573154 573190 C 39 0.00 1248 reject_low 20 ALIGNMENT 0 YS2-6g22.p1k chr12 836 304 220692 220691 C 533 0.00 1248 reject_low 6 ALIGNMENT 0 YS2-6g22.p1k chr15 304 836 123605 123604 F 533 0.00 1248 reject_low 4 ALIGNMENT 27 YS2-6g22.p1k chr04 172 80 359307 359400 C 93 80.65 1248 reject_low 17 ALIGNMENT 0 YS2-6g22.p1k chr11 836 277 301997 301996 C 560 0.00 1248 reject_low 19 ALIGNMENT 0 YS2-6g22.p1k chr04 836 173 359308 359307 C 664 0.00 1248 reject_low 17 ALIGNMENT 71 YS2-6g22.p1k chr07 42 246 327957 328160 F 205 80.98 1248 reject_low 1 ALIGNMENT 0 YS2-6g22.p1k chr06 277 836 158635 158634 F 560 0.00 1248 reject_low 13 ALIGNMENT 40 YS2-6g22.p1k chr05 46 303 138273 138531 F 258 74.81 1248 reject_low 15 ALIGNMENT 64 YS2-6g22.p1k chr14 303 46 102214 102471 C 258 77.91 1248 reject_low 8 ALIGNMENT 53 YS2-6g22.p1k chr10 58 271 204047 204259 F 214 78.04 1248 reject_low 14 ALIGNMENT 70 YS2-6g22.p1k chr13 303 46 372718 372981 C 258 78.29 1248 reject_low 3 ALIGNMENT 67 YS2-6g22.p1k chr07 46 303 535816 536079 F 258 77.91 1248 reject_low 5 ALIGNMENT 67 YS2-6g22.p1k chr12 303 46 220691 220954 C 258 77.91 1248 reject_low 6 ALIGNMENT 0 YS2-6g22.p1k chr13 304 836 184479 184478 F 533 0.00 1248 reject_low 7 ALIGNMENT 0 YS2-6g22.p1k chr05 304 836 138531 138530 F 533 0.00 1248 reject_low 15 ALIGNMENT 24 YS2-6g22.p1k chr11 139 46 302123 302218 C 94 78.72 1248 reject_low 19 ALIGNMENT 0 YS2-6g22.p1k chr13 836 222 573112 573111 C 615 0.00 1248 reject_low 20 ALIGNMENT 0 YS2-6g22.p1k chr16 304 836 560787 560786 F 533 0.00 1248 reject_low 11 ALIGNMENT 57 YS2-6g22.p1k chr16 46 303 560530 560787 F 258 77.52 1248 reject_low 11 ALIGNMENT 0 YS2-6g22.p1k chr15 304 836 595130 595129 F 533 0.00 1248 reject_low 9 ALIGNMENT 0 YS2-6g22.p1k chr10 304 836 540988 540987 F 533 0.00 1248 reject_low 10 ALIGNMENT 0 YS2-6g22.p1k chr07 247 836 328160 328159 F 590 0.00 1248 reject_low 1 ALIGNMENT 0 YS2-6g22.p1k chr02 223 836 9089 9088 F 614 0.00 1248 reject_low 18 ALIGNMENT 64 YS2-6g22.p1k chr15 46 303 594873 595130 F 258 77.91 1248 reject_low 9 ALIGNMENT 26 YS2-6g22.p1k chr13 139 58 573191 573272 C 82 79.27 1248 reject_low 20 ALIGNMENT 914 YS2-6g22.p1k chr11 1129 33 218229 219330 C 1097 95.62 1248 accept 0 ALIGNMENT 42 YS2-6g22.p1k chr07 181 260 701210 701289 F 80 85.00 1248 reject_low 16 ALIGNMENT 0 YS2-6g22.p1k chr07 261 836 701289 701288 F 576 0.00 1248 reject_low 16 ALIGNMENT 55 YS2-6g22.p1k chr03 46 303 151569 151826 F 258 76.74 1248 reject_low 12 ALIGNMENT 70 YS2-6g22.p1k chr15 46 303 123342 123605 F 258 78.29 1248 reject_low 4 ALIGNMENT 56 YS2-6g22.p1k chr06 46 276 158408 158635 F 231 77.92 1248 reject_low 13 ALIGNMENT 36 YS2-6g22.p1k chr02 46 169 8902 9026 F 124 79.03 1248 reject_low 18 ALIGNMENT 0 YS2-6g22.p1k chr04 79 62 359401 359400 C 18 0.00 1248 reject_low 17 ALIGNMENT 0 YS2-6g22.p1k chr02 170 177 9027 9044 F 8 0.00 1248 reject_low 18 ALIGNMENT 0 YS2-6g22.p1k chr14 836 304 102215 102214 C 533 0.00 1248 reject_low 8 ALIGNMENT 74 YS2-6g24.q1k chr09 723 616 146881 146988 C 108 90.74 1298 reject_low 3 ALIGNMENT 904 YS2-6g24.p1k chr09 33 1205 143945 145107 F 1173 94.88 1211 accept 0 ALIGNMENT 0 YS2-6g24.q1k chr09 774 62 147142 147141 C 713 0.00 1298 reject_low 4 ALIGNMENT 786 YS2-6g24.q1k chr09 879 32 146884 147729 C 848 98.00 1298 accept 0 ALIGNMENT 0 YS2-6g24.q1k chr09 742 724 146882 146881 C 19 0.00 1298 reject_low 3 ALIGNMENT 0 YS2-6g24.q1k chr09 615 62 146989 146988 C 554 0.00 1298 reject_low 3 ALIGNMENT 141 YS2-6g24.q1k chr09 802 616 146881 147066 C 187 93.58 1298 reject_low 2 ALIGNMENT 0 YS2-6g24.q1k chr09 615 62 147067 147066 C 554 0.00 1298 reject_low 2 ALIGNMENT 0 YS2-6g24.q1k chr09 696 62 147142 147141 C 635 0.00 1298 reject_low 1 ALIGNMENT 128 YS2-6g24.q1k chr09 970 697 146883 147141 C 274 87.23 1298 reject_low 1 ALIGNMENT 53 YS2-6g24.q1k chr09 927 775 146997 147141 C 153 83.01 1298 reject_low 4 ALIGNMENT 138 YS2-6h03.p1k chr05 288 61 434660 434886 C 228 88.16 1302 reject_low 13 ALIGNMENT 0 YS2-6h03.p1k chr02 289 849 198024 198023 F 561 0.00 1302 reject_low 12 ALIGNMENT 0 YS2-6h03.p1k chr05 60 61 434887 434877 C 0 0.00 1302 reject_low 13 ALIGNMENT 129 YS2-6h03.p1k chr04 286 61 945984 946208 C 226 87.17 1302 reject_low 18 ALIGNMENT 74 YS2-6h03.p1k chr07 416 337 930949 931028 C 80 97.50 1302 reject_low 7 ALIGNMENT 128 YS2-6h03.p1k chr15 72 288 854365 854579 F 217 88.02 1302 reject_low 19 ALIGNMENT 0 YS2-6h03.p1k chr07 849 417 930950 930949 C 433 0.00 1302 reject_low 7 ALIGNMENT 0 YS2-6h03.p1k chr02 61 60 197807 197797 F 0 0.00 1302 reject_low 12 ALIGNMENT 138 YS2-6h03.p1k chr02 61 288 197798 198024 F 228 88.16 1302 reject_low 12 ALIGNMENT 0 YS2-6h03.p1k chr14 289 849 547045 547044 F 561 0.00 1302 reject_low 14 ALIGNMENT 0 YS2-6h03.p1k chr13 338 62 183969 183968 C 277 0.00 1302 reject_low 10 ALIGNMENT 0 YS2-6h03.p1k chr02 336 62 197705 197704 C 275 0.00 1302 reject_low 5 ALIGNMENT 0 YS2-6h03.p1k chr08 849 289 146358 146357 C 561 0.00 1302 reject_low 16 ALIGNMENT 74 YS2-6h03.p1k chr10 409 324 396642 396727 C 86 95.35 1302 reject_low 4 ALIGNMENT 0 YS2-6h03.p1k chr03 849 419 142691 142690 C 431 0.00 1302 reject_low 8 ALIGNMENT 72 YS2-6h03.p1k chr03 418 338 142690 142769 C 81 97.53 1302 reject_low 8 ALIGNMENT 20 YS2-6h03.p1k chr08 60 32 146575 146603 C 29 93.10 1302 reject_low 16 ALIGNMENT 0 YS2-6h03.p1k chr06 410 849 162292 162291 F 440 0.00 1302 reject_low 6 ALIGNMENT 72 YS2-6h03.p1k chr13 418 339 183888 183968 C 80 97.50 1302 reject_low 10 ALIGNMENT 20 YS2-6h03.p1k chr05 60 32 434878 434906 C 29 93.10 1302 reject_low 13 ALIGNMENT 0 YS2-6h03.p1k chr16 289 849 880689 880688 F 561 0.00 1302 reject_low 1 ALIGNMENT 21 YS2-6h03.p1k chr15 32 71 854334 854373 F 40 87.50 1302 reject_low 19 ALIGNMENT 0 YS2-6h03.p1k chr15 289 849 354433 354432 F 561 0.00 1302 reject_low 2 ALIGNMENT 0 YS2-6h03.p1k chr15 849 418 226602 226601 C 432 0.00 1302 reject_low 9 ALIGNMENT 132 YS2-6h03.p1k chr14 61 288 546820 547045 F 228 87.72 1302 reject_low 14 ALIGNMENT 0 YS2-6h03.p1k chr14 61 60 546829 546819 F 0 0.00 1302 reject_low 14 ALIGNMENT 0 YS2-6h03.p1k chr15 163 849 226878 226877 F 687 0.00 1302 reject_low 11 ALIGNMENT 0 YS2-6h03.p1k chr02 849 419 197624 197623 C 431 0.00 1302 reject_low 5 ALIGNMENT 0 YS2-6h03.p1k chr04 849 289 1175159 1175158 C 561 0.00 1302 reject_low 3 ALIGNMENT 132 YS2-6h03.p1k chr16 61 288 856622 856848 F 228 87.28 1302 reject_low 20 ALIGNMENT 147 YS2-6h03.p1k chr16 61 288 880463 880689 F 228 89.47 1302 reject_low 1 ALIGNMENT 0 YS2-6h03.p1k chr03 337 62 142770 142769 C 276 0.00 1302 reject_low 8 ALIGNMENT 20 YS2-6h03.p1k chr04 60 32 946200 946228 C 29 93.10 1302 reject_low 18 ALIGNMENT 0 YS2-6h03.p1k chr15 337 62 226681 226680 C 276 0.00 1302 reject_low 9 ALIGNMENT 0 YS2-6h03.p1k chr16 61 60 856631 856621 F 0 0.00 1302 reject_low 20 ALIGNMENT 129 YS2-6h03.p1k chr08 288 61 146357 146583 C 228 86.84 1302 reject_low 16 ALIGNMENT 0 YS2-6h03.p1k chr16 289 322 856849 860358 F 34 0.00 1302 reject_low 20 ALIGNMENT 129 YS2-6h03.p1k chr14 61 288 726316 726542 F 228 86.84 1302 reject_low 17 ALIGNMENT 0 YS2-6h03.p1k chr14 61 60 726325 726315 F 0 0.00 1302 reject_low 17 ALIGNMENT 0 YS2-6h03.p1k chr16 410 849 860445 860444 F 440 0.00 1302 reject_low 20 ALIGNMENT 73 YS2-6h03.p1k chr15 417 338 226601 226680 C 80 97.50 1302 reject_low 9 ALIGNMENT 20 YS2-6h03.p1k chr14 32 60 546800 546828 F 29 93.10 1302 reject_low 14 ALIGNMENT 125 YS2-6h03.p1k chr15 34 288 354183 354433 F 255 85.10 1302 reject_low 2 ALIGNMENT 84 YS2-6h03.p1k chr16 323 409 860359 860445 F 87 98.85 1302 reject_low 20 ALIGNMENT 125 YS2-6h03.p1k chr04 288 139 1175158 1175307 C 150 95.33 1302 reject_low 3 ALIGNMENT 0 YS2-6h03.p1k chr15 72 71 854374 854364 F 0 0.00 1302 reject_low 19 ALIGNMENT 0 YS2-6h03.p1k chr14 289 849 726542 726541 F 561 0.00 1302 reject_low 17 ALIGNMENT 0 YS2-6h03.p1k chr13 849 419 183889 183888 C 431 0.00 1302 reject_low 10 ALIGNMENT 20 YS2-6h03.p1k chr02 32 60 197778 197806 F 29 93.10 1302 reject_low 12 ALIGNMENT 57 YS2-6h03.p1k chr15 34 162 226751 226878 F 129 82.95 1302 reject_low 11 ALIGNMENT 0 YS2-6h03.p1k chr08 60 61 146584 146574 C 0 0.00 1302 reject_low 16 ALIGNMENT 0 YS2-6h03.p1k chr15 289 849 854579 854578 F 561 0.00 1302 reject_low 19 ALIGNMENT 20 YS2-6h03.p1k chr16 32 60 856602 856630 F 29 93.10 1302 reject_low 20 ALIGNMENT 959 YS2-6h03.p1k chr07 32 1107 845347 846436 F 1076 97.30 1302 accept 0 ALIGNMENT 0 YS2-6h03.p1k chr05 849 289 434661 434660 C 561 0.00 1302 reject_low 13 ALIGNMENT 0 YS2-6h03.p1k chr01 289 849 182920 182919 F 561 0.00 1302 reject_low 15 ALIGNMENT 20 YS2-6h03.p1k chr14 32 60 726296 726324 F 29 93.10 1302 reject_low 17 ALIGNMENT 0 YS2-6h03.p1k chr07 336 62 931029 931028 C 275 0.00 1302 reject_low 7 ALIGNMENT 0 YS2-6h03.p1k chr04 60 61 946209 946199 C 0 0.00 1302 reject_low 18 ALIGNMENT 76 YS2-6h03.p1k chr06 334 409 162217 162292 F 76 100.00 1302 reject_low 6 ALIGNMENT 0 YS2-6h03.p1k chr10 849 410 396643 396642 C 440 0.00 1302 reject_low 4 ALIGNMENT 20 YS2-6h03.p1k chr01 32 60 182675 182703 F 29 93.10 1302 reject_low 15 ALIGNMENT 0 YS2-6h03.p1k chr10 323 62 396728 396727 C 262 0.00 1302 reject_low 4 ALIGNMENT 0 YS2-6h03.p1k chr01 61 60 182704 182694 F 0 0.00 1302 reject_low 15 ALIGNMENT 75 YS2-6h03.p1k chr02 418 337 197623 197704 C 82 97.56 1302 reject_low 5 ALIGNMENT 0 YS2-6h03.p1k chr06 62 333 162217 162216 F 272 0.00 1302 reject_low 6 ALIGNMENT 604 YS2-6h03.q1k chr07 815 31 848737 849515 C 785 93.12 1323 accept 0 ALIGNMENT 0 YS2-6h03.p1k chr04 849 287 945985 945984 C 563 0.00 1302 reject_low 18 ALIGNMENT 0 YS2-6h03.p1k chr04 138 62 1175308 1175307 C 77 0.00 1302 reject_low 3 ALIGNMENT 129 YS2-6h03.p1k chr01 61 288 182695 182920 F 228 87.28 1302 reject_low 15 ALIGNMENT 889 YS2-6h04.p1k chr05 34 1059 523854 524900 F 1026 96.39 1271 accept 0 ALIGNMENT 730 YS2-6h04.q1k chr04 33 984 1516731 1517674 F 952 94.54 1312 ambiguous_tel 1 ALIGNMENT 641 YS2-6h05.q1k chr04 912 34 1478192 1479062 C 879 92.38 1427 accept 0 ALIGNMENT 863 YS2-6h05.p1k chr04 39 1072 1473750 1474789 F 1034 96.42 1297 accept 0 ALIGNMENT 1013 YS2-6h06.p1k chr02 1175 31 324149 325305 C 1145 96.94 1355 accept 0 ALIGNMENT 475 YS2-6h06.q1k chr02 4 683 323995 324669 F 680 91.47 1226 accept 0 ALIGNMENT 154 YS2-6h09.q1k chr10 32 208 643448 643625 F 177 98.31 1661 accept_chi 1 ALIGNMENT 154 YS2-6h09.q1k vc_4 249 410 6353 6514 F 162 98.77 1661|1,0 reject_low 9 ALIGNMENT 0 YS2-6h09.q1k vc_7 459 460 5172 6360 C 0 0.00 1661 reject_low 10 ALIGNMENT 0 YS2-6h09.q1k vc_4 397 338 1447 1446 C 60 0.00 1661 reject_low 11 ALIGNMENT 0 YS2-6h09.q1k vc_4 62 248 126 125 F 187 0.00 1661 reject_low 8 ALIGNMENT 0 YS2-6h09.q1k vc_7 250 397 13562 13561 F 148 0.00 1661 reject_low 17 ALIGNMENT 0 YS2-6h09.q1k vc_7 62 211 63 62 F 150 0.00 1661 reject_low 16 ALIGNMENT 36 YS2-6h09.q1k vc_5 246 211 1 36 C 36 100.00 1661 reject_low 18 ALIGNMENT 0 YS2-6h09.q1k chr10 209 397 643625 643624 F 189 0.00 1661 accept_chi 1 ALIGNMENT 321 YS2-6h09.q1k vc_3 249 706 2531 2985 F 458 90.61 1661 reject_vc 7 ALIGNMENT 0 YS2-6h09.q1k vc_2 208 62 2146 2145 C 147 0.00 1661 reject_low 13 ALIGNMENT 0 YS2-6h09.q1k vc_1 397 250 2473 2472 C 148 0.00 1661 reject_low 12 ALIGNMENT 41 YS2-6h09.q1k vc_3 249 209 2472 2512 C 41 100.00 1661 reject_low 14 ALIGNMENT 39 YS2-6h09.q1k vc_5 249 211 5025 5063 C 39 100.00 1661 reject_low 15 ALIGNMENT 47 YS2-6h09.q1k vc_7 460 409 6360 6411 C 52 98.08 1661|1,0 reject_low 10 ALIGNMENT 38 YS2-6h09.q1k vc_7 212 249 63 100 F 38 100.00 1661 reject_low 16 ALIGNMENT 41 YS2-6h09.q1k vc_4 209 249 5831 5871 F 41 100.00 1661 reject_low 9 ALIGNMENT 331 YS2-6h09.q1k vc_4 783 249 5279 5812 C 535 88.04 1661 reject_vc 4 ALIGNMENT 154 YS2-6h09.q1k vc_4 249 410 126 287 F 162 98.77 1661 reject_low 8 ALIGNMENT 0 YS2-6h09.q1k vc_4 248 62 5813 5812 C 187 0.00 1661 reject_vc 4 ALIGNMENT 0 YS2-6h09.q1k vc_3 208 62 2513 2512 C 147 0.00 1661 reject_low 14 ALIGNMENT 0 YS2-6h09.q1k vc_3 397 250 2473 2472 C 148 0.00 1661 reject_low 14 ALIGNMENT 0 YS2-6h09.q1k vc_7 248 62 2728 2727 C 187 0.00 1661 reject_vc 3 ALIGNMENT 0 YS2-6h09.q1k vc_5 397 247 2 1 C 151 0.00 1661 reject_low 18 ALIGNMENT 0 YS2-6h09.q1k vc_5 397 250 5026 5025 C 148 0.00 1661 reject_low 15 ALIGNMENT 0 YS2-6h09.q1k vc_5 210 62 37 36 C 149 0.00 1661 reject_low 18 ALIGNMENT 41 YS2-6h09.q1k vc_1 249 209 2472 2512 C 41 100.00 1661 reject_low 12 ALIGNMENT 160 YS2-6h09.p1k chr10 209 33 643448 643625 C 177 99.44 227 accept_chi 0 ALIGNMENT 0 YS2-6h09.q1k vc_5 210 62 5064 5063 C 149 0.00 1661 reject_low 15 ALIGNMENT 0 YS2-6h09.q1k vc_7 250 397 100 99 F 148 0.00 1661 reject_low 16 ALIGNMENT 0 YS2-6h09.q1k vc_4 62 208 5831 5830 F 147 0.00 1661 reject_low 9 ALIGNMENT 0 YS2-6h09.q1k vc_7 408 62 6412 6411 C 347 0.00 1661 reject_low 10 ALIGNMENT 0 YS2-6h09.q1k vc_1 62 248 2531 2530 F 187 0.00 1661 reject_vc 5 ALIGNMENT 338 YS2-6h09.q1k vc_5 249 783 2398 2929 F 535 88.41 1661 reject_vc 2 ALIGNMENT 0 YS2-6h09.q1k vc_5 62 248 2398 2397 F 187 0.00 1661 reject_vc 2 ALIGNMENT 0 YS2-6h09.q1k vc_3 62 248 2531 2530 F 187 0.00 1661 reject_vc 7 ALIGNMENT 0 YS2-6h09.p1k chr10 227 210 643449 643448 C 18 0.00 227 accept_chi 0 ALIGNMENT 0 YS2-6h09.q1k vc_1 208 62 2513 2512 C 147 0.00 1661 reject_low 12 ALIGNMENT 321 YS2-6h09.q1k vc_2 249 706 2164 2618 F 458 90.61 1661 reject_vc 6 ALIGNMENT 338 YS2-6h09.q1k vc_7 783 249 2196 2727 C 535 88.41 1661 reject_vc 3 ALIGNMENT 0 YS2-6h09.q1k vc_4 250 249 5872 6353 F 0 0.00 1661 reject_low 9 ALIGNMENT 321 YS2-6h09.q1k vc_1 249 706 2531 2985 F 458 90.61 1661 reject_vc 5 ALIGNMENT 0 YS2-6h09.q1k vc_4 248 62 1535 1534 C 187 0.00 1661 reject_low 11 ALIGNMENT 0 YS2-6h09.q1k vc_2 397 250 2106 2105 C 148 0.00 1661 reject_low 13 ALIGNMENT 0 YS2-6h09.q1k vc_7 62 211 13525 13524 F 150 0.00 1661 reject_low 17 ALIGNMENT 118 YS2-6h09.q1k vc_7 706 459 4928 5172 C 248 83.47 1661|0,1 reject_low 10 ALIGNMENT 87 YS2-6h09.q1k vc_4 337 249 1446 1534 C 89 100.00 1661 reject_low 11 ALIGNMENT 41 YS2-6h09.q1k vc_2 249 209 2105 2145 C 41 100.00 1661 reject_low 13 ALIGNMENT 0 YS2-6h09.q1k vc_2 62 248 2164 2163 F 187 0.00 1661 reject_vc 6 ALIGNMENT 38 YS2-6h09.q1k vc_7 212 249 13525 13562 F 38 100.00 1661 reject_low 17 ALIGNMENT 0 YS2-6h10.q1k vc_7 305 305 4700 4921 C 1 0.00 1175 reject_low 6 ALIGNMENT 425 YS2-6h10.q1k vc_5 1 657 2556 3207 F 657 89.50 1175 reject_vc 0 ALIGNMENT 356 YS2-6h10.q1k vc_4 425 1 5231 5654 C 425 95.53 1175 reject_low 2 ALIGNMENT 61 YS2-6h10.q1k vc_4 305 238 6273 6339 C 68 98.53 1175 reject_low 9 ALIGNMENT 0 YS2-6h10.q1k vc_4 237 62 6340 6339 C 176 0.00 1175 reject_low 9 ALIGNMENT 0 YS2-6h10.q1k vc_4 62 237 1548 1547 F 176 0.00 1175 reject_low 7 ALIGNMENT 61 YS2-6h10.q1k vc_4 305 238 46 112 C 68 98.53 1175 reject_low 8 ALIGNMENT 425 YS2-6h10.q1k vc_7 657 1 1918 2569 C 657 89.50 1175 reject_vc 1 ALIGNMENT 61 YS2-6h10.q1k vc_4 238 305 1548 1614 F 68 98.53 1175 reject_low 7 ALIGNMENT 0 YS2-6h10.q1k vc_4 237 62 113 112 C 176 0.00 1175 reject_low 8 ALIGNMENT 292 YS2-6h10.q1k vc_1 1 304 2689 2991 F 304 99.01 1175 reject_low 3 ALIGNMENT 70 YS2-6h10.q1k vc_7 426 306 4581 4699 C 121 88.43 1175 reject_low 6 ALIGNMENT 237 YS2-6h10.q1k vc_7 304 53 4922 5172 C 252 98.41 1175|0,1 reject_low 6 ALIGNMENT 127 YS2-6h10.q1k vc_4 319 657 1888 2223 F 339 81.42 1175 reject_low 7 ALIGNMENT 0 YS2-6h10.q1k vc_7 53 54 5172 6360 C 0 0.00 1175 reject_low 6 ALIGNMENT 292 YS2-6h10.q1k vc_3 1 304 2689 2991 F 304 99.01 1175 reject_low 5 ALIGNMENT 51 YS2-6h10.q1k vc_7 54 3 6360 6411 C 52 100.00 1175|1,0 reject_low 6 ALIGNMENT 0 YS2-6h10.q1k vc_4 306 318 1615 1887 F 13 0.00 1175 reject_low 7 ALIGNMENT 292 YS2-6h10.q1k vc_2 1 304 2322 2624 F 304 99.01 1175 reject_low 4 ALIGNMENT 704 YS2-6h11.q1k chr05 26 947 374252 375172 F 922 93.71 1531 accept 0 ALIGNMENT 909 YS2-6h11.p1k chr05 1031 32 378610 379614 C 1000 97.90 1225 accept 0 ALIGNMENT 940 YS2-6h12.p1k chr16 1164 32 331035 332164 C 1133 96.03 1322 accept_chi 0 ALIGNMENT 766 YS2-6h12.q1k chr07 1059 5 427002 428042 C 1055 92.42 1505 accept_chi 1 ALIGNMENT 182 YS2-6h13.q1k chr12 278 1 451419 451709 C 278 91.01 1300 reject_low 2 ALIGNMENT 943 YS2-6h13.p1k chr12 35 1072 464893 465933 F 1038 97.78 1270 reject_low 1 ALIGNMENT 0 YS2-6h13.q1k chr12 404 279 451420 451419 C 126 0.00 1300 reject_low 2 ALIGNMENT 943 YS2-6h13.p1k chr12 35 1072 455756 456796 F 1038 97.78 1270 accept 0 ALIGNMENT 406 YS2-6h13.q1k chr12 615 1 460210 460846 C 615 90.57 1300 accept 0 ALIGNMENT 209 YS2-6h14.q1k chr13 394 61 177820 178153 C 334 87.72 1296 accept 0 ALIGNMENT 957 YS2-6h14.p1k chr13 30 1205 174231 175412 F 1176 94.90 1295 accept 0 ALIGNMENT 920 YS2-6h15.p1k chr08 1102 33 199510 200585 C 1070 96.26 1284 accept 0 ALIGNMENT 639 YS2-6h15.q1k chr08 26 918 195599 196482 F 893 91.94 1283 accept 0 ALIGNMENT 269 YS2-6h15.p1k chr11 84 670 156438 157024 F 587 82.79 1284 reject_low 1 ALIGNMENT 0 YS2-6h15.p1k chr11 671 803 157024 157023 F 133 0.00 1284 reject_low 1 ALIGNMENT 0 YS2-6h15.p1k chr11 62 83 156438 156437 F 22 0.00 1284 reject_low 1 ALIGNMENT 0 YS2-6h16.p1k vc_2 806 62 2106 2105 C 745 0.00 1311 reject_low 3 ALIGNMENT 0 YS2-6h16.p1k vc_4 62 806 5871 5870 F 745 0.00 1311 reject_low 8 ALIGNMENT 28 YS2-6h16.p1k vc_3 840 807 2438 2472 C 34 94.12 1311 reject_low 10 ALIGNMENT 0 YS2-6h16.p1k vc_7 62 806 100 99 F 745 0.00 1311 reject_low 6 ALIGNMENT 288 YS2-6h16.p1k vc_7 807 1200 100 497 F 394 91.88 1311 reject_low 6 ALIGNMENT 288 YS2-6h16.p1k vc_1 1200 807 1708 2105 C 394 91.88 1311 reject_low 2 ALIGNMENT 0 YS2-6h16.p1k vc_3 806 62 2473 2472 C 745 0.00 1311 reject_low 10 ALIGNMENT 288 YS2-6h16.p1k vc_2 1200 807 1708 2105 C 394 91.88 1311 reject_low 3 ALIGNMENT 0 YS2-6h16.p1k vc_7 62 806 13562 13561 F 745 0.00 1311 reject_low 7 ALIGNMENT 0 YS2-6h16.p1k vc_1 886 841 2439 2438 C 46 0.00 1311 reject_low 9 ALIGNMENT 28 YS2-6h16.p1k vc_1 840 807 2438 2472 C 34 94.12 1311 reject_low 9 ALIGNMENT 0 YS2-6h16.p1k vc_1 806 62 2106 2105 C 745 0.00 1311 reject_low 2 ALIGNMENT 0 YS2-6h16.p1k vc_3 886 841 2439 2438 C 46 0.00 1311 reject_low 10 ALIGNMENT 611 YS2-6h16.q1k chr12 5 734 928021 928748 F 730 97.12 1212 accept_chi 1 ALIGNMENT 271 YS2-6h16.p1k vc_4 807 1161 5871 6226 F 355 92.68 1311 reject_low 8 ALIGNMENT 288 YS2-6h16.p1k vc_3 1200 807 1708 2105 C 394 91.88 1311 reject_low 4 ALIGNMENT 685 YS2-6h16.p1k chr12 788 30 927992 928749 C 759 99.21 1311 accept_chi 0 ALIGNMENT 0 YS2-6h16.p1k vc_5 806 62 5026 5025 C 745 0.00 1311 reject_low 5 ALIGNMENT 0 YS2-6h16.p1k vc_1 806 62 2473 2472 C 745 0.00 1311 reject_low 9 ALIGNMENT 0 YS2-6h16.p1k chr12 886 789 927993 927992 C 98 0.00 1311 accept_chi 0 ALIGNMENT 288 YS2-6h16.p1k vc_5 1200 807 4628 5025 C 394 91.88 1311 reject_low 5 ALIGNMENT 288 YS2-6h16.p1k vc_7 807 1200 13562 13959 F 394 91.88 1311 reject_low 7 ALIGNMENT 0 YS2-6h16.p1k vc_3 806 62 2106 2105 C 745 0.00 1311 reject_low 4 ALIGNMENT 0 YS2-6h17.q1k vc_2 137 397 2164 2163 F 261 0.00 1479 reject_low 3 ALIGNMENT 0 YS2-6h17.q1k vc_5 358 137 5064 5063 C 222 0.00 1479 reject_low 14 ALIGNMENT 0 YS2-6h17.q1k vc_3 137 397 2531 2530 F 261 0.00 1479 reject_low 4 ALIGNMENT 166 YS2-6h17.q1k vc_5 398 737 2398 2729 F 340 85.00 1479 reject_low 5 ALIGNMENT 0 YS2-6h17.q1k vc_1 137 397 2531 2530 F 261 0.00 1479 reject_low 2 ALIGNMENT 0 YS2-6h17.q1k vc_7 397 137 2728 2727 C 261 0.00 1479 reject_low 6 ALIGNMENT 27 YS2-6h17.q1k vc_5 396 359 5027 5063 C 38 92.11 1479 reject_low 14 ALIGNMENT 0 YS2-6h17.p1k chr13 334 351 801999 801998 F 18 0.00 351 accept_chi 0 ALIGNMENT 29 YS2-6h17.q1k vc_4 357 396 5831 5869 F 40 92.50 1479 reject_low 9 ALIGNMENT 166 YS2-6h17.q1k vc_1 398 737 2531 2862 F 340 85.00 1479 reject_low 2 ALIGNMENT 0 YS2-6h17.q1k vc_3 356 137 2513 2512 C 220 0.00 1479 reject_low 13 ALIGNMENT 159 YS2-6h17.q1k vc_4 737 398 5479 5812 C 340 84.41 1479 reject_low 7 ALIGNMENT 0 YS2-6h17.q1k vc_5 358 137 37 36 C 222 0.00 1479 reject_low 15 ALIGNMENT 166 YS2-6h17.q1k vc_7 737 398 2396 2727 C 340 85.00 1479 reject_low 6 ALIGNMENT 26 YS2-6h17.q1k vc_5 387 359 8 36 C 29 96.55 1479 reject_low 15 ALIGNMENT 0 YS2-6h17.q1k vc_4 137 397 126 125 F 261 0.00 1479 reject_low 8 ALIGNMENT 0 YS2-6h17.q1k vc_2 356 137 2146 2145 C 220 0.00 1479 reject_low 12 ALIGNMENT 66 YS2-6h17.q1k vc_4 480 398 1451 1534 C 83 93.98 1479 reject_low 10 ALIGNMENT 0 YS2-6h17.q1k vc_1 356 137 2513 2512 C 220 0.00 1479 reject_low 11 ALIGNMENT 29 YS2-6h17.q1k vc_2 396 357 2107 2145 C 40 92.50 1479 reject_low 12 ALIGNMENT 0 YS2-6h17.q1k vc_4 397 137 5813 5812 C 261 0.00 1479 reject_low 7 ALIGNMENT 96 YS2-6h17.q1k vc_4 398 558 6353 6514 F 161 86.96 1479 reject_low 9 ALIGNMENT 215 YS2-6h17.q1k chr13 357 62 801698 801991 C 296 92.91 1479 accept_chi 1 ALIGNMENT 0 YS2-6h17.q1k vc_4 137 356 5831 5830 F 220 0.00 1479 reject_low 9 ALIGNMENT 166 YS2-6h17.q1k vc_3 398 737 2531 2862 F 340 85.00 1479 reject_low 4 ALIGNMENT 0 YS2-6h17.q1k vc_5 137 397 2398 2397 F 261 0.00 1479 reject_low 5 ALIGNMENT 0 YS2-6h17.q1k vc_4 397 137 1535 1534 C 261 0.00 1479 reject_low 10 ALIGNMENT 29 YS2-6h17.q1k vc_3 396 357 2474 2512 C 40 92.50 1479 reject_low 13 ALIGNMENT 96 YS2-6h17.q1k vc_4 398 558 126 287 F 161 86.96 1479 reject_low 8 ALIGNMENT 29 YS2-6h17.q1k vc_1 396 357 2474 2512 C 40 92.50 1479 reject_low 11 ALIGNMENT 166 YS2-6h17.q1k vc_2 398 737 2164 2495 F 340 85.00 1479 reject_low 3 ALIGNMENT 259 YS2-6h17.p1k chr13 32 333 801698 801999 F 302 97.02 351 accept_chi 0 ALIGNMENT 0 YS2-6h17.q1k vc_4 397 397 5870 6352 F 1 0.00 1479 reject_low 9 ALIGNMENT 448 YS2-6h18.q1k chr13 44 756 546980 547687 F 713 89.76 1391 accept 0 ALIGNMENT 962 YS2-6h18.p1k chr13 1099 41 546982 548042 C 1059 98.11 1267 accept 0 ALIGNMENT 692 YS2-6h19.q1k chr10 952 29 170334 171243 C 924 93.18 1348 accept 0 ALIGNMENT 899 YS2-6h19.p1k chr10 36 1070 166516 167564 F 1035 96.52 1240 accept 0 ALIGNMENT 0 YS2-6h20.p1k vc_4 62 733 5871 5870 F 672 0.00 1266 reject_low 8 ALIGNMENT 0 YS2-6h20.p1k vc_1 890 768 2439 2438 C 123 0.00 1266 reject_low 10 ALIGNMENT 0 YS2-6h20.p1k vc_1 733 62 2473 2472 C 672 0.00 1266 reject_low 10 ALIGNMENT 277 YS2-6h20.p1k vc_7 734 1144 100 532 F 411 90.51 1266 reject_low 3 ALIGNMENT 277 YS2-6h20.p1k vc_5 1144 734 4593 5025 C 411 90.51 1266 reject_low 2 ALIGNMENT 277 YS2-6h20.p1k vc_3 1144 734 1673 2105 C 411 90.51 1266 reject_low 6 ALIGNMENT 0 YS2-6h20.p1k vc_1 733 62 2106 2105 C 672 0.00 1266 reject_low 4 ALIGNMENT 277 YS2-6h20.p1k vc_2 1144 734 1673 2105 C 411 90.51 1266 reject_low 5 ALIGNMENT 245 YS2-6h20.p1k vc_4 734 1074 5871 6225 F 341 91.50 1266 reject_low 8 ALIGNMENT 0 YS2-6h20.p1k vc_3 890 768 2439 2438 C 123 0.00 1266 reject_low 11 ALIGNMENT 0 YS2-6h20.q1k vc_7 786 77 2728 2727 C 710 0.00 1372 reject_low 3 ALIGNMENT 41 YS2-6h20.q1k vc_7 952 787 2569 2727 C 166 78.31 1372 reject_low 3 ALIGNMENT 0 YS2-6h20.p1k vc_7 62 733 100 99 F 672 0.00 1266 reject_low 3 ALIGNMENT 0 YS2-6h20.p1k vc_7 62 733 13562 13561 F 672 0.00 1266 reject_low 7 ALIGNMENT 0 YS2-6h20.p1k vc_2 733 62 2106 2105 C 672 0.00 1266 reject_low 5 ALIGNMENT 28 YS2-6h20.p1k vc_1 767 734 2438 2472 C 34 94.12 1266 reject_low 10 ALIGNMENT 0 YS2-6h20.p1k vc_3 733 62 2106 2105 C 672 0.00 1266 reject_low 6 ALIGNMENT 41 YS2-6h20.q1k vc_5 787 952 2398 2556 F 166 78.31 1372 reject_low 2 ALIGNMENT 28 YS2-6h20.p1k vc_3 767 734 2438 2472 C 34 94.12 1266 reject_low 11 ALIGNMENT 0 YS2-6h20.q1k vc_5 77 786 2398 2397 F 710 0.00 1372 reject_low 2 ALIGNMENT 41 YS2-6h20.q1k vc_1 787 952 2531 2689 F 166 78.31 1372 reject_low 9 ALIGNMENT 0 YS2-6h20.p1k vc_3 733 62 2473 2472 C 672 0.00 1266 reject_low 11 ALIGNMENT 652 YS2-6h20.p1k chr12 30 715 911806 912492 F 686 99.56 1266 accept_chi 0 ALIGNMENT 0 YS2-6h20.p1k chr12 716 890 912492 912491 F 175 0.00 1266 accept_chi 0 ALIGNMENT 277 YS2-6h20.p1k vc_1 1144 734 1673 2105 C 411 90.51 1266 reject_low 4 ALIGNMENT 0 YS2-6h20.p1k vc_5 733 62 5026 5025 C 672 0.00 1266 reject_low 2 ALIGNMENT 277 YS2-6h20.p1k vc_7 734 1144 13562 13994 F 411 90.51 1266 reject_low 7 ALIGNMENT 0 YS2-6h20.q1k vc_1 77 786 2531 2530 F 710 0.00 1372 reject_low 9 ALIGNMENT 617 YS2-6h20.q1k chr12 745 49 911799 912492 C 697 97.56 1372 accept_chi 1 ALIGNMENT 914 YS2-6h23.p1k chr07 26 1177 995067 996218 F 1152 94.53 1201 accept 0 ALIGNMENT 653 YS2-6h23.q1k chr07 903 32 998267 999127 C 872 93.35 1295 accept 0 ALIGNMENT 703 YS2-6i01.p1k chr12 906 32 343269 344131 C 875 94.97 1446 accept_chi 0 ALIGNMENT 465 YS2-6i01.q1k chr02 40 703 451287 451952 F 664 90.81 1366 accept_chi 1 ALIGNMENT 942 YS2-6i04.p1k chr04 38 1135 949090 950190 F 1098 96.17 1341 accept 0 ALIGNMENT 711 YS2-6i04.q1k chr04 955 3 952509 953449 C 953 93.91 1363 accept 0 ALIGNMENT 712 YS2-6i07.q1k chr01 968 26 132442 133376 C 943 93.85 1344 accept 0 ALIGNMENT 894 YS2-6i07.p1k chr01 33 1138 127847 128967 F 1106 94.76 1349 accept 0 ALIGNMENT 0 YS2-6i08.q1k chr14 114 149 344386 344385 F 36 0.00 1341 reject_low 1 ALIGNMENT 79 YS2-6i08.q1k chr14 150 393 344386 344629 F 244 78.28 1341 reject_low 1 ALIGNMENT 0 YS2-6i08.q1k chr14 394 497 344629 344628 F 104 0.00 1341 reject_low 1 ALIGNMENT 669 YS2-6i08.q1k chr05 921 28 404845 405737 C 894 92.95 1341 accept 0 ALIGNMENT 884 YS2-6i08.p1k chr05 30 1095 403613 404692 F 1066 95.50 1313 accept 0 ALIGNMENT 931 YS2-6i09.p1k chr15 31 1122 820050 821148 F 1092 96.34 1326 accept 0 ALIGNMENT 463 YS2-6i09.q1k chr15 770 7 821070 821831 C 764 88.09 1285 accept 0 ALIGNMENT 686 YS2-6i10.q1k chr07 2 852 237814 238668 F 851 94.83 1335 accept 0 ALIGNMENT 907 YS2-6i10.p1k chr07 1076 33 240249 241308 C 1044 97.03 1308 accept 0 ALIGNMENT 957 YS2-6i11.p1k chr13 1129 38 230984 232090 C 1092 96.98 1324 accept 0 ALIGNMENT 827 YS2-6i11.q1k chr13 31 1155 226375 227484 F 1125 93.24 1304 accept 0 ALIGNMENT 280 YS2-6i11.q1k chr04 347 33 1354825 1355139 C 315 96.83 1304 reject_low 1 ALIGNMENT 0 YS2-6i11.q1k chr04 672 348 1354826 1354825 C 325 0.00 1304 reject_low 1 ALIGNMENT 935 YS2-6i12.p1k chr16 27 1097 402732 403814 F 1071 97.01 1311 accept 0 ALIGNMENT 241 YS2-6i12.q1k chr02 735 332 606740 607141 C 404 87.38 1163 reject_low 1 ALIGNMENT 0 YS2-6i12.q1k chr02 331 62 607142 607141 C 270 0.00 1163 reject_low 1 ALIGNMENT 595 YS2-6i12.q1k chr16 760 5 407116 407868 C 756 94.05 1163 accept 0 ALIGNMENT 499 YS2-6i14.p1k vc_6 1 670 3712 4389 F 670 92.54 769 reject_low 6 ALIGNMENT 44 YS2-6i14.q1k vc_4 301 238 6276 6339 C 64 90.62 1099 reject_low 14 ALIGNMENT 497 YS2-6i14.p1k vc_3 706 1 1035 1749 C 706 91.08 769 reject_low 4 ALIGNMENT 0 YS2-6i14.q1k vc_4 62 237 1548 1547 F 176 0.00 1099 reject_low 13 ALIGNMENT 288 YS2-6i14.q1k vc_4 423 1 5233 5654 C 423 90.31 1099 reject_low 7 ALIGNMENT 200 YS2-6i14.q1k vc_7 301 53 4924 5172 C 249 93.57 1099|0,1 reject_low 11 ALIGNMENT 252 YS2-6i14.q1k vc_3 1 301 2689 2989 F 301 94.68 1099 reject_low 10 ALIGNMENT 491 YS2-6i14.p1k vc_7 1 706 456 1170 F 706 90.93 769 reject_low 1 ALIGNMENT 0 YS2-6i14.q1k vc_4 237 62 113 112 C 176 0.00 1099 reject_low 12 ALIGNMENT 500 YS2-6i14.p1k vc_5 706 1 3955 4669 C 706 91.22 769 reject_vc 0 ALIGNMENT 252 YS2-6i14.q1k vc_2 1 301 2322 2622 F 301 94.68 1099 reject_low 9 ALIGNMENT 44 YS2-6i14.q1k vc_4 238 301 1548 1611 F 64 90.62 1099 reject_low 13 ALIGNMENT 48 YS2-6i14.q1k vc_7 54 3 6360 6411 C 52 98.08 1099|1,0 reject_low 11 ALIGNMENT 304 YS2-6i14.q1k vc_7 486 1 2088 2569 C 486 88.48 1099 reject_low 1 ALIGNMENT 491 YS2-6i14.p1k vc_7 1 706 13918 14632 F 706 90.93 769 reject_low 5 ALIGNMENT 497 YS2-6i14.p1k vc_1 706 1 1035 1749 C 706 91.08 769 reject_low 2 ALIGNMENT 0 YS2-6i14.q1k vc_7 53 54 5172 6360 C 0 0.00 1099 reject_low 11 ALIGNMENT 0 YS2-6i14.q1k vc_4 237 62 6340 6339 C 176 0.00 1099 reject_low 14 ALIGNMENT 311 YS2-6i14.q1k vc_5 1 562 2556 3112 F 562 86.12 1099 reject_vc 0 ALIGNMENT 44 YS2-6i14.q1k vc_4 301 238 49 112 C 64 90.62 1099 reject_low 12 ALIGNMENT 252 YS2-6i14.q1k vc_1 1 301 2689 2989 F 301 94.68 1099 reject_low 8 ALIGNMENT 497 YS2-6i14.p1k vc_2 706 1 1035 1749 C 706 91.08 769 reject_low 3 ALIGNMENT 45 YS2-6i15.p1k chrm 658 706 71214 71262 F 49 97.96 1378 reject_low 10 ALIGNMENT 0 YS2-6i15.p1k chrm 657 77 53869 53868 C 581 0.00 1378 reject_low 13 ALIGNMENT 47 YS2-6i15.p1k chrm 712 630 64505 64584 C 83 87.95 1378 reject_low 8 ALIGNMENT 63 YS2-6i15.p1k chrm 705 625 46309 46392 C 81 93.83 1378 reject_low 4 ALIGNMENT 31 YS2-6i15.p1k chrm 658 712 4537 4594 F 55 87.27 1378 reject_low 11 ALIGNMENT 0 YS2-6i15.p1k chrm 627 77 8308 8307 C 551 0.00 1378 reject_low 7 ALIGNMENT 0 YS2-6i15.p1k chrm 845 802 48008 48000 C 44 0.00 1378 reject_bad_break 0 ALIGNMENT 558 YS2-6i15.p1k chrm 801 32 48001 48762 C 770 98.18 1378 reject_bad_break 0 ALIGNMENT 0 YS2-6i15.p1k chrm 629 77 64585 64584 C 553 0.00 1378 reject_low 8 ALIGNMENT 0 YS2-6i15.p1k chrm 657 77 34329 34328 C 581 0.00 1378 reject_low 5 ALIGNMENT 0 YS2-6i15.p1k chrm 657 77 83096 83095 C 581 0.00 1378 reject_low 2 ALIGNMENT 0 YS2-6i15.p1k chrm 657 77 80545 80544 C 581 0.00 1378 reject_low 9 ALIGNMENT 0 YS2-6i15.p1k chrm 723 811 57093 57092 F 89 0.00 1378 reject_low 6 ALIGNMENT 0 YS2-6i15.p1k chrm 811 713 64506 64505 C 99 0.00 1378 reject_low 8 ALIGNMENT 49 YS2-6i15.p1k chrm 707 628 8228 8307 C 80 87.50 1378 reject_low 7 ALIGNMENT 60 YS2-6i15.p1k chrm 854 795 53663 53722 C 60 100.00 1378|4,0 reject_low 1 ALIGNMENT 45 YS2-6i15.p1k chrm 707 658 80494 80544 C 50 98.00 1378 reject_low 9 ALIGNMENT 25 YS2-6i15.p1k chrm 709 682 34925 34952 C 28 96.43 1378 reject_low 15 ALIGNMENT 0 YS2-6i15.p1k chrm 612 77 62946 62945 C 536 0.00 1378 reject_low 1 ALIGNMENT 43 YS2-6i15.p1k chrm 705 658 83048 83095 C 48 97.92 1378 reject_low 2 ALIGNMENT 57 YS2-6i15.p1k chrm 701 613 62860 62945 C 89 91.01 1378 reject_low 1 ALIGNMENT 0 YS2-6i15.p1k chrm 618 77 11130 11129 C 542 0.00 1378 reject_low 3 ALIGNMENT 0 YS2-6i15.p1k chrm 657 77 81446 81445 C 581 0.00 1378 reject_low 12 ALIGNMENT 0 YS2-6i15.p1k chrm 811 700 81405 81404 C 112 0.00 1378 reject_low 12 ALIGNMENT 0 YS2-6i15.p1k chrm 811 699 53829 53828 C 113 0.00 1378 reject_low 13 ALIGNMENT 51 YS2-6i15.p1k chrm 658 722 57030 57093 F 65 93.85 1378 reject_low 6 ALIGNMENT 0 YS2-6i15.p1k chrm 811 708 80495 80494 C 104 0.00 1378 reject_low 9 ALIGNMENT 0 YS2-6i15.p1k chrm 811 700 10747 10746 C 112 0.00 1378 reject_low 14 ALIGNMENT 34 YS2-6i15.p1k chrm 699 658 10746 10787 C 42 97.62 1378 reject_low 14 ALIGNMENT 0 YS2-6i15.p1k chrm 77 657 57030 57029 F 581 0.00 1378 reject_low 6 ALIGNMENT 0 YS2-6i15.p1k chrm 811 707 11500 11499 C 105 0.00 1378 reject_low 16 ALIGNMENT 0 YS2-6i15.p1k chrm 811 708 8229 8228 C 104 0.00 1378 reject_low 7 ALIGNMENT 0 YS2-6i15.p1k chrm 739 706 82963 83047 C 34 0.00 1378 reject_low 2 ALIGNMENT 0 YS2-6i15.p1k chrm 676 77 11529 11528 C 600 0.00 1378 reject_low 16 ALIGNMENT 0 YS2-6i15.p1k chrm 713 811 4594 4593 F 99 0.00 1378 reject_low 11 ALIGNMENT 66 YS2-6i15.p1k chrm 870 740 82834 82962 C 131 87.02 1378 reject_low 2 ALIGNMENT 61 YS2-6i15.p1k chrm 708 619 11038 11129 C 90 92.22 1378 reject_low 3 ALIGNMENT 0 YS2-6i15.p1k chrm 850 851 48003 53666 C 0 0.00 1378 reject_low 1 ALIGNMENT 0 YS2-6i15.p1k chrm 77 657 71214 71213 F 581 0.00 1378 reject_low 10 ALIGNMENT 37 YS2-6i15.p1k chrm 699 658 81404 81445 C 42 100.00 1378 reject_low 12 ALIGNMENT 0 YS2-6i15.p1k chrm 811 709 11039 11038 C 103 0.00 1378 reject_low 3 ALIGNMENT 0 YS2-6i15.p1k chrm 77 657 4537 4536 F 581 0.00 1378 reject_low 11 ALIGNMENT 36 YS2-6i15.p1k chrm 698 658 53828 53868 C 41 100.00 1378 reject_low 13 ALIGNMENT 0 YS2-6i15.p1k chrm 707 811 71262 71261 F 105 0.00 1378 reject_low 10 ALIGNMENT 27 YS2-6i15.p1k chrm 706 677 11499 11528 C 30 96.67 1378 reject_low 16 ALIGNMENT 47 YS2-6i15.p1k chrm 724 658 34263 34328 C 67 92.54 1378 reject_low 5 ALIGNMENT 0 YS2-6i15.p1k chrm 624 77 46393 46392 C 548 0.00 1378 reject_low 4 ALIGNMENT 0 YS2-6i15.p1k chrm 681 77 34953 34952 C 605 0.00 1378 reject_low 15 ALIGNMENT 0 YS2-6i15.p1k chrm 657 77 10788 10787 C 581 0.00 1378 reject_low 14 ALIGNMENT 47 YS2-6i15.p1k chrm 918 846 47934 48007 C 73 89.04 1378|0,5 reject_bad_break 0 reject_low 1 ALIGNMENT 0 YS2-6i15.p1k chrm 811 706 46310 46309 C 106 0.00 1378 reject_low 4 ALIGNMENT 0 YS2-6i15.p1k chrm 794 702 53723 62859 C 93 0.00 1378 reject_low 1 ALIGNMENT 0 YS2-6i15.p1k chrm 811 725 34264 34263 C 87 0.00 1378 reject_low 5 ALIGNMENT 0 YS2-6i15.p1k chrm 811 710 34926 34925 C 102 0.00 1378 reject_low 15 ALIGNMENT 422 YS2-6i18.p1k vc_7 1 611 456 1062 F 611 90.51 687 reject_vc 1 ALIGNMENT 38 YS2-6i18.q1k vc_7 270 307 13525 13562 F 38 100.00 1516 reject_low 20 ALIGNMENT 422 YS2-6i18.p1k vc_7 1 611 13918 14524 F 611 90.51 687 reject_low 7 ALIGNMENT 428 YS2-6i18.p1k vc_1 611 1 1143 1749 C 611 91.00 687 reject_low 4 ALIGNMENT 40 YS2-6i18.q1k vc_2 307 268 2105 2144 C 40 100.00 1516 reject_low 17 ALIGNMENT 0 YS2-6i18.q1k vc_4 152 306 126 125 F 155 0.00 1516 reject_low 12 ALIGNMENT 428 YS2-6i18.p1k vc_3 611 1 1143 1749 C 611 91.00 687 reject_low 6 ALIGNMENT 40 YS2-6i18.q1k vc_3 307 268 2472 2511 C 40 100.00 1516 reject_low 18 ALIGNMENT 0 YS2-6i18.q1k vc_5 268 152 5064 5063 C 117 0.00 1516 reject_low 19 ALIGNMENT 431 YS2-6i18.p1k vc_5 611 1 4063 4669 C 611 91.16 687 reject_vc 0 ALIGNMENT 79 YS2-6i18.q1k vc_4 393 307 1448 1534 C 87 97.70 1516 reject_low 14 ALIGNMENT 0 YS2-6i18.q1k vc_2 152 306 2164 2163 F 155 0.00 1516 reject_low 9 ALIGNMENT 0 YS2-6i18.q1k vc_5 268 152 37 36 C 117 0.00 1516 reject_low 21 ALIGNMENT 0 YS2-6i18.q1k vc_3 267 152 2512 2511 C 116 0.00 1516 reject_low 18 ALIGNMENT 138 YS2-6i18.q1k vc_4 307 468 126 287 F 162 95.68 1516 reject_low 12 ALIGNMENT 172 YS2-6i18.q1k chr11 266 45 484451 484671 C 222 94.59 1516 reject_low 2 ALIGNMENT 253 YS2-6i18.q1k vc_1 307 651 2531 2873 F 345 92.17 1516 reject_low 8 ALIGNMENT 253 YS2-6i18.q1k vc_7 651 307 2385 2727 C 345 92.17 1516 reject_vc 1 ALIGNMENT 0 YS2-6i18.q1k vc_3 152 306 2531 2530 F 155 0.00 1516 reject_low 10 ALIGNMENT 40 YS2-6i18.q1k vc_4 268 307 5832 5871 F 40 100.00 1516 reject_low 13 ALIGNMENT 0 YS2-6i18.q1k vc_7 306 152 2728 2727 C 155 0.00 1516 reject_vc 1 ALIGNMENT 0 YS2-6i18.q1k vc_1 267 152 2512 2511 C 116 0.00 1516 reject_low 16 ALIGNMENT 0 YS2-6i18.q1k vc_5 152 306 2398 2397 F 155 0.00 1516 reject_vc 0 ALIGNMENT 253 YS2-6i18.q1k vc_3 307 651 2531 2873 F 345 92.17 1516 reject_low 10 ALIGNMENT 36 YS2-6i18.q1k vc_5 304 269 1 36 C 36 100.00 1516 reject_low 21 ALIGNMENT 0 YS2-6i18.q1k vc_4 152 267 5832 5831 F 116 0.00 1516 reject_low 13 ALIGNMENT 431 YS2-6i18.p1k vc_6 1 611 3712 4318 F 611 91.00 687 reject_low 3 ALIGNMENT 0 YS2-6i18.q1k vc_4 306 152 1535 1534 C 155 0.00 1516 reject_low 14 ALIGNMENT 0 YS2-6i18.q1k vc_2 267 152 2145 2144 C 116 0.00 1516 reject_low 17 ALIGNMENT 0 YS2-6i18.q1k vc_7 152 269 13525 13524 F 118 0.00 1516 reject_low 20 ALIGNMENT 31 YS2-6i18.q1k vc_7 519 467 6360 6411 C 53 88.68 1516|1,0 reject_low 15 ALIGNMENT 138 YS2-6i18.q1k vc_4 307 468 6353 6514 F 162 95.68 1516|1,0 reject_low 13 ALIGNMENT 253 YS2-6i18.q1k vc_2 307 651 2164 2506 F 345 92.17 1516 reject_low 9 ALIGNMENT 246 YS2-6i18.q1k vc_4 651 307 5468 5812 C 345 91.59 1516 reject_low 11 ALIGNMENT 253 YS2-6i18.q1k vc_5 307 651 2398 2740 F 345 92.17 1516 reject_vc 0 ALIGNMENT 0 YS2-6i18.q1k vc_1 152 306 2531 2530 F 155 0.00 1516 reject_low 8 ALIGNMENT 0 YS2-6i18.q1k vc_4 306 152 5813 5812 C 155 0.00 1516 reject_low 11 ALIGNMENT 0 YS2-6i18.q1k vc_7 518 519 5172 6360 C 0 0.00 1516 reject_low 15 ALIGNMENT 83 YS2-6i18.q1k vc_7 651 518 5040 5172 C 134 88.81 1516|0,1 reject_low 15 ALIGNMENT 0 YS2-6i18.q1k vc_4 308 307 5872 6353 F 0 0.00 1516 reject_low 13 ALIGNMENT 40 YS2-6i18.q1k vc_1 307 268 2472 2511 C 40 100.00 1516 reject_low 16 ALIGNMENT 428 YS2-6i18.p1k vc_2 611 1 1143 1749 C 611 91.00 687 reject_low 5 ALIGNMENT 0 YS2-6i18.q1k vc_7 466 152 6412 6411 C 315 0.00 1516 reject_low 15 ALIGNMENT 39 YS2-6i18.q1k vc_5 307 269 5025 5063 C 39 100.00 1516 reject_low 19 ALIGNMENT 0 YS2-6i19.q1k vc_5 122 272 2398 2397 F 151 0.00 1401 reject_vc 5 ALIGNMENT 0 YS2-6i19.q1k vc_1 235 122 2510 2509 C 114 0.00 1401 reject_low 10 ALIGNMENT 216 YS2-6i19.q1k vc_3 273 671 2531 2928 F 399 85.71 1401 reject_vc 4 ALIGNMENT 25 YS2-6i19.q1k vc_3 266 236 2479 2509 C 31 93.55 1401 reject_low 12 ALIGNMENT 209 YS2-6i19.q1k vc_4 671 273 5413 5812 C 399 85.21 1401 reject_vc 7 ALIGNMENT 0 YS2-6i19.q1k vc_3 235 122 2510 2509 C 114 0.00 1401 reject_low 12 ALIGNMENT 0 YS2-6i19.q1k vc_5 235 122 5063 5062 C 114 0.00 1401 reject_low 14 ALIGNMENT 0 YS2-6i19.q1k vc_1 122 272 2531 2530 F 151 0.00 1401 reject_vc 2 ALIGNMENT 0 YS2-6i19.q1k vc_4 267 272 5865 6352 F 6 0.00 1401 reject_low 8 ALIGNMENT 0 YS2-6i19.p1k chr16 255 239 654873 654872 C 17 0.00 255 accept_chi 0 ALIGNMENT 0 YS2-6i19.q1k vc_5 235 122 36 35 C 114 0.00 1401 reject_low 13 ALIGNMENT 216 YS2-6i19.q1k vc_5 273 671 2398 2795 F 399 85.71 1401 reject_vc 5 ALIGNMENT 0 YS2-6i19.q1k vc_4 272 122 5813 5812 C 151 0.00 1401 reject_vc 7 ALIGNMENT 216 YS2-6i19.q1k vc_7 671 273 2330 2727 C 399 85.71 1401 reject_vc 6 ALIGNMENT 25 YS2-6i19.q1k vc_4 236 266 5834 5864 F 31 93.55 1401 reject_low 8 ALIGNMENT 0 YS2-6i19.q1k vc_4 122 235 5834 5833 F 114 0.00 1401 reject_low 8 ALIGNMENT 25 YS2-6i19.q1k vc_1 266 236 2479 2509 C 31 93.55 1401 reject_low 10 ALIGNMENT 0 YS2-6i19.q1k vc_3 122 272 2531 2530 F 151 0.00 1401 reject_vc 4 ALIGNMENT 114 YS2-6i19.q1k vc_4 273 434 126 287 F 162 90.74 1401 reject_low 9 ALIGNMENT 216 YS2-6i19.q1k vc_1 273 671 2531 2928 F 399 85.71 1401 reject_vc 2 ALIGNMENT 66 YS2-6i19.q1k vc_4 359 273 1448 1534 C 87 93.10 1401 reject_low 15 ALIGNMENT 0 YS2-6i19.q1k vc_4 272 122 1535 1534 C 151 0.00 1401 reject_low 15 ALIGNMENT 0 YS2-6i19.q1k vc_2 235 122 2143 2142 C 114 0.00 1401 reject_low 11 ALIGNMENT 216 YS2-6i19.q1k vc_2 273 671 2164 2561 F 399 85.71 1401 reject_vc 3 ALIGNMENT 171 YS2-6i19.p1k chr16 238 40 654872 655071 C 199 96.48 255 accept_chi 0 ALIGNMENT 114 YS2-6i19.q1k vc_4 273 434 6353 6514 F 162 90.74 1401 reject_low 8 ALIGNMENT 25 YS2-6i19.q1k vc_5 266 236 5032 5062 C 31 93.55 1401 reject_low 14 ALIGNMENT 0 YS2-6i19.q1k vc_4 122 272 126 125 F 151 0.00 1401 reject_low 9 ALIGNMENT 0 YS2-6i19.q1k vc_7 272 122 2728 2727 C 151 0.00 1401 reject_vc 6 ALIGNMENT 0 YS2-6i19.q1k vc_2 122 272 2164 2163 F 151 0.00 1401 reject_vc 3 ALIGNMENT 25 YS2-6i19.q1k vc_2 266 236 2112 2142 C 31 93.55 1401 reject_low 11 ALIGNMENT 139 YS2-6i19.q1k chr16 29 228 654872 655071 F 200 91.00 1401 accept_chi 1 ALIGNMENT 25 YS2-6i19.q1k vc_5 266 236 5 35 C 31 93.55 1401 reject_low 13 ALIGNMENT 860 YS2-6i20.p1k chr06 37 1045 243390 244415 F 1009 96.53 1179 accept 0 ALIGNMENT 816 YS2-6i20.q1k chr06 1061 28 247316 248349 C 1034 94.49 1328 accept 0 ALIGNMENT 39 YS2-6i21.q1k chrm 151 194 52330 52373 F 44 100.00 1312 reject_low 3 ALIGNMENT 38 YS2-6i21.p1k chrm 638 699 77051 77112 F 62 90.32 1243 reject_low 4 ALIGNMENT 0 YS2-6i21.q1k chrm 416 195 69445 69444 C 222 0.00 1312 reject_low 2 ALIGNMENT 0 YS2-6i21.q1k chrm 107 150 52330 52329 F 44 0.00 1312 reject_low 3 ALIGNMENT 0 YS2-6i21.p1k chrm 870 62 62904 62903 C 809 0.00 1243 reject_low 3 ALIGNMENT 40 YS2-6i21.q1k chrm 194 150 50111 50155 C 45 100.00 1312 reject_low 12 ALIGNMENT 0 YS2-6i21.q1k chrm 152 107 3102 3101 C 46 0.00 1312 reject_low 15 ALIGNMENT 0 YS2-6i21.q1k chrm 152 107 11089 11088 C 46 0.00 1312 reject_low 16 ALIGNMENT 0 YS2-6i21.q1k chrm 107 149 2749 2748 F 43 0.00 1312 reject_low 11 ALIGNMENT 0 YS2-6i21.q1k chr04 251 416 544799 544798 F 166 0.00 1312 reject_low 13 ALIGNMENT 32 YS2-6i21.p1k chrm 971 871 62807 62903 C 101 81.19 1243 reject_low 3 ALIGNMENT 0 YS2-6i21.q1k chrm 152 107 46357 46356 C 46 0.00 1312 reject_low 18 ALIGNMENT 0 YS2-6i21.q1k chrm 152 107 62904 62903 C 46 0.00 1312 reject_low 19 ALIGNMENT 0 YS2-6i21.q1k chrm 416 195 46316 46315 C 222 0.00 1312 reject_low 18 ALIGNMENT 0 YS2-6i21.q1k chrm 149 107 50156 50155 C 43 0.00 1312 reject_low 12 ALIGNMENT 0 YS2-6i21.q1k chrm 416 195 62863 62862 C 222 0.00 1312 reject_low 19 ALIGNMENT 0 YS2-6i21.p1k chrm 865 62 69101 69100 C 804 0.00 1243 reject_low 9 ALIGNMENT 0 YS2-6i21.p1k chrm 700 777 77112 77111 F 78 0.00 1243 reject_low 4 ALIGNMENT 166 YS2-6i21.q1k chrm 625 220 947 1350 C 406 88.42 1312 reject_low 1 ALIGNMENT 82 YS2-6i21.p1k chrm 681 786 85674 85779 F 106 99.06 1243|3,0 accept 0 ALIGNMENT 0 YS2-6i21.p1k chrm 62 637 77051 77050 F 576 0.00 1243 reject_low 4 ALIGNMENT 37 YS2-6i21.q1k chrm 194 153 11047 11088 C 42 100.00 1312 reject_low 16 ALIGNMENT 0 YS2-6i21.q1k chrm 416 195 50112 50111 C 222 0.00 1312 reject_low 12 ALIGNMENT 47 YS2-6i21.q1k chrm 194 110 69444 69529 C 85 87.06 1312 reject_low 2 ALIGNMENT 36 YS2-6i21.p1k chrm 926 869 76580 76638 C 58 87.93 1243 reject_low 10 ALIGNMENT 0 YS2-6i21.q1k chrm 416 194 53829 53828 C 223 0.00 1312 reject_low 14 ALIGNMENT 0 YS2-6i21.p1k chrm 684 683 85625 85676 F 0 0.00 1243 accept 0 ALIGNMENT 0 YS2-6i21.q1k chrm 210 211 1407 8220 C 0 0.00 1312 reject_low 5 ALIGNMENT 0 YS2-6i21.q1k chrm 152 107 34977 34976 C 46 0.00 1312 reject_low 17 ALIGNMENT 29 YS2-6i21.q1k chr04 198 250 544747 544799 F 53 98.11 1312 reject_low 13 ALIGNMENT 0 YS2-6i21.p1k chrm 853 62 83114 83113 C 792 0.00 1243 reject_low 6 ALIGNMENT 37 YS2-6i21.q1k chrm 194 153 34935 34976 C 42 100.00 1312 reject_low 17 ALIGNMENT 0 YS2-6i21.p1k chrm 697 777 67045 67044 F 81 0.00 1243 reject_low 2 ALIGNMENT 37 YS2-6i21.q1k chrm 194 153 3060 3101 C 42 100.00 1312 reject_low 15 ALIGNMENT 0 YS2-6i21.q1k chrm 416 195 9033 9032 C 222 0.00 1312 reject_low 8 ALIGNMENT 65 YS2-6i21.q1k chrm 162 53 1424 1534 C 110 90.00 1312 reject_low 1 ALIGNMENT 0 YS2-6i21.q1k chrm 150 107 52816 52815 C 44 0.00 1312 reject_low 20 ALIGNMENT 37 YS2-6i21.q1k chrm 194 153 62862 62903 C 42 100.00 1312 reject_low 19 ALIGNMENT 0 YS2-6i21.q1k chrm 416 195 52773 52772 C 222 0.00 1312 reject_low 20 ALIGNMENT 0 YS2-6i21.q1k chrm 195 416 52373 52372 F 222 0.00 1312 reject_low 3 ALIGNMENT 28 YS2-6i21.p1k chrm 809 918 71143 71261 F 110 80.00 1243 reject_low 7 ALIGNMENT 0 YS2-6i21.q1k chr04 163 197 544743 544746 F 35 0.00 1312 reject_low 13 ALIGNMENT 98 YS2-6i21.p1k chrm 788 1064 2 279 F 277 86.28 1243 reject_low 1 ALIGNMENT 193 YS2-6i21.p1k chrm 337 686 85261 85627 F 350 93.14 1243|0,3 accept 0 ALIGNMENT 0 YS2-6i21.q1k chrm 416 195 34936 34935 C 222 0.00 1312 reject_low 17 ALIGNMENT 0 YS2-6i21.p1k chrm 288 336 85260 85260 F 49 0.00 1243 accept 0 ALIGNMENT 104 YS2-6i21.p1k chrm 72 287 85055 85259 F 216 93.06 1243 accept 0 ALIGNMENT 0 YS2-6i21.q1k chrm 416 290 1329 1328 C 127 0.00 1312 reject_low 5 ALIGNMENT 46 YS2-6i21.q1k chrm 194 117 9032 9109 C 78 88.46 1312 reject_low 8 ALIGNMENT 0 YS2-6i21.p1k chrm 62 787 2 1 F 726 0.00 1243 reject_low 1 ALIGNMENT 0 YS2-6i21.p1k chrm 62 633 66983 66982 F 572 0.00 1243 reject_low 2 ALIGNMENT 0 YS2-6i21.q1k chrm 150 107 53871 53870 C 44 0.00 1312 reject_low 14 ALIGNMENT 0 YS2-6i21.q1k chrm 416 195 3061 3060 C 222 0.00 1312 reject_low 15 ALIGNMENT 0 YS2-6i21.q1k chrm 416 195 11048 11047 C 222 0.00 1312 reject_low 16 ALIGNMENT 40 YS2-6i21.q1k chrm 150 194 2749 2793 F 45 100.00 1312 reject_low 11 ALIGNMENT 36 YS2-6i21.p1k chrm 634 696 66983 67045 F 63 87.30 1243 reject_low 2 ALIGNMENT 37 YS2-6i21.q1k chrm 194 153 46315 46356 C 42 100.00 1312 reject_low 18 ALIGNMENT 0 YS2-6i21.q1k chrm 195 416 2793 2792 F 222 0.00 1312 reject_low 11 ALIGNMENT 54 YS2-6i21.q1k chr04 98 162 544678 544742 F 65 100.00 1312 reject_low 13 ALIGNMENT 52 YS2-6i21.q1k chrm 289 199 1328 1418 C 91 96.70 1312|0,12 reject_low 5 ALIGNMENT 0 YS2-6i21.q1k chrm 149 107 8281 8280 C 43 0.00 1312 reject_low 5 ALIGNMENT 47 YS2-6i21.p1k chrm 926 854 83040 83113 C 73 89.04 1243 reject_low 6 ALIGNMENT 38 YS2-6i21.q1k chrm 193 151 53828 53870 C 43 100.00 1312 reject_low 14 ALIGNMENT 0 YS2-6i21.q1k chrm 219 163 1351 1423 C 57 0.00 1312 reject_low 1 ALIGNMENT 46 YS2-6i21.q1k chrm 221 150 8210 8280 C 72 88.89 1312|11,0 reject_low 5 ALIGNMENT 36 YS2-6i21.q1k chrm 194 151 52772 52815 C 44 97.73 1312 reject_low 20 ALIGNMENT 0 YS2-6i21.p1k chrm 62 808 71143 71142 F 747 0.00 1243 reject_low 7 ALIGNMENT 0 YS2-6i21.p1k chrm 868 62 76639 76638 C 807 0.00 1243 reject_low 10 ALIGNMENT 38 YS2-6i21.p1k chrm 927 866 69039 69100 C 62 87.10 1243 reject_low 9 ALIGNMENT 321 YS2-6i23.q1k vc_5 439 901 2398 2856 F 463 90.50 1284 reject_low 5 ALIGNMENT 0 YS2-6i23.q1k vc_1 138 438 2531 2530 F 301 0.00 1284 reject_low 2 ALIGNMENT 31 YS2-6i23.q1k vc_3 439 403 2472 2508 C 37 94.59 1284 reject_low 14 ALIGNMENT 0 YS2-6i23.q1k vc_2 138 438 2164 2163 F 301 0.00 1284 reject_low 3 ALIGNMENT 338 YS2-6i23.p1k chr15 391 30 351276 351638 C 362 98.62 410 accept_chi 0 ALIGNMENT 28 YS2-6i23.q1k vc_5 436 403 1 34 C 34 94.12 1284 reject_low 16 ALIGNMENT 0 YS2-6i23.q1k vc_4 440 439 5872 6353 F 0 0.00 1284 reject_low 10 ALIGNMENT 0 YS2-6i23.p1k chr15 410 392 351277 351276 C 19 0.00 410 accept_chi 0 ALIGNMENT 79 YS2-6i23.q1k vc_4 525 439 1448 1534 C 87 97.70 1284 reject_low 11 ALIGNMENT 0 YS2-6i23.q1k vc_4 438 138 1535 1534 C 301 0.00 1284 reject_low 11 ALIGNMENT 0 YS2-6i23.q1k chr15 400 415 351638 351637 F 16 0.00 1284 accept_chi 1 ALIGNMENT 31 YS2-6i23.q1k vc_4 403 439 5835 5871 F 37 94.59 1284 reject_low 10 ALIGNMENT 31 YS2-6i23.q1k vc_1 439 403 2472 2508 C 37 94.59 1284 reject_low 12 ALIGNMENT 0 YS2-6i23.q1k vc_7 648 138 5173 5172 C 511 0.00 1284 reject_low 8 ALIGNMENT 0 YS2-6i23.q1k vc_5 138 438 2398 2397 F 301 0.00 1284 reject_low 5 ALIGNMENT 0 YS2-6i23.q1k vc_4 438 138 5813 5812 C 301 0.00 1284 reject_low 7 ALIGNMENT 321 YS2-6i23.q1k vc_3 439 901 2531 2989 F 463 90.50 1284 reject_low 4 ALIGNMENT 142 YS2-6i23.q1k vc_4 439 600 126 287 F 162 96.30 1284 reject_low 9 ALIGNMENT 31 YS2-6i23.q1k vc_2 439 403 2105 2141 C 37 94.59 1284 reject_low 13 ALIGNMENT 0 YS2-6i23.q1k vc_1 402 138 2509 2508 C 265 0.00 1284 reject_low 12 ALIGNMENT 0 YS2-6i23.q1k vc_3 138 438 2531 2530 F 301 0.00 1284 reject_low 4 ALIGNMENT 0 YS2-6i23.q1k vc_2 402 138 2142 2141 C 265 0.00 1284 reject_low 13 ALIGNMENT 31 YS2-6i23.q1k vc_5 439 403 5025 5061 C 37 94.59 1284 reject_low 15 ALIGNMENT 314 YS2-6i23.q1k vc_4 901 439 5352 5812 C 463 90.06 1284 reject_low 7 ALIGNMENT 321 YS2-6i23.q1k vc_7 901 439 2269 2727 C 463 90.50 1284 reject_low 6 ALIGNMENT 0 YS2-6i23.q1k vc_5 402 138 5062 5061 C 265 0.00 1284 reject_low 15 ALIGNMENT 321 YS2-6i23.q1k vc_1 439 901 2531 2989 F 463 90.50 1284 reject_low 2 ALIGNMENT 0 YS2-6i23.q1k vc_4 138 438 126 125 F 301 0.00 1284 reject_low 9 ALIGNMENT 301 YS2-6i23.q1k chr15 36 399 351276 351638 F 364 95.05 1284 accept_chi 1 ALIGNMENT 0 YS2-6i23.q1k vc_5 402 138 35 34 C 265 0.00 1284 reject_low 16 ALIGNMENT 0 YS2-6i23.q1k vc_4 138 402 5835 5834 F 265 0.00 1284 reject_low 10 ALIGNMENT 0 YS2-6i23.q1k vc_7 438 138 2728 2727 C 301 0.00 1284 reject_low 6 ALIGNMENT 321 YS2-6i23.q1k vc_2 439 901 2164 2622 F 463 90.50 1284 reject_low 3 ALIGNMENT 0 YS2-6i23.q1k vc_3 402 138 2509 2508 C 265 0.00 1284 reject_low 14 ALIGNMENT 142 YS2-6i23.q1k vc_4 439 600 6353 6514 F 162 96.30 1284|1,0 reject_low 10 ALIGNMENT 133 YS2-6i23.q1k vc_7 901 649 4924 5172 C 253 85.38 1284 reject_low 8 ALIGNMENT 151 YS2-6i24.p1k chr07 201 33 603776 603944 C 169 97.63 220 accept 0 ALIGNMENT 0 YS2-6i24.p1k chr07 220 202 603777 603776 C 19 0.00 220 accept 0 ALIGNMENT 621 YS2-6j01.q1k chr10 26 730 186684 187388 F 705 97.30 1398 accept_chi 1 ALIGNMENT 666 YS2-6j01.p1k chr10 737 34 186682 187388 C 704 99.57 755 accept_chi 0 ALIGNMENT 0 YS2-6j01.p1k chr10 755 738 186683 186682 C 18 0.00 755 accept_chi 0 ALIGNMENT 964 YS2-6j02.p1k chr16 1161 39 721974 723096 C 1123 96.53 1309 accept 0 ALIGNMENT 642 YS2-6j02.q1k chr16 33 883 720742 721589 F 851 93.18 1379 accept 0 ALIGNMENT 899 YS2-6j03.p1k chr02 37 1118 32588 33677 F 1082 95.38 1273 ambiguous_trans 12 ALIGNMENT 950 YS2-6j03.p1k chr15 1118 37 705987 707076 C 1082 96.95 1273 ambiguous_trans 2 ALIGNMENT 911 YS2-6j03.p1k chr07 37 1118 814399 815488 F 1082 95.75 1273 ambiguous_trans 11 ALIGNMENT 917 YS2-6j03.p1k chr12 37 1118 944136 945225 F 1082 95.93 1273 ambiguous_trans 9 ALIGNMENT 932 YS2-6j03.p1k chr07 1118 37 570667 571756 C 1082 96.40 1273 ambiguous_trans 5 ALIGNMENT 929 YS2-6j03.p1k chr12 1118 37 977660 978749 C 1082 96.30 1273 ambiguous_trans 6 ALIGNMENT 923 YS2-6j03.p1k chr03 37 1118 87757 88846 F 1082 96.12 1273 ambiguous_trans 7 ALIGNMENT 953 YS2-6j03.p1k chr04 37 1118 874763 875852 F 1082 97.04 1273 ambiguous_trans 1 ALIGNMENT 938 YS2-6j03.p1k chr14 1118 37 563956 565045 C 1082 96.58 1273 ambiguous_trans 4 ALIGNMENT 893 YS2-6j03.p1k chr04 1118 37 515607 516696 C 1082 95.19 1273 ambiguous_trans 13 ALIGNMENT 911 YS2-6j03.p1k chr06 37 1118 140855 141944 F 1082 95.75 1273 ambiguous_trans 10 ALIGNMENT 771 YS2-6j03.q1k chr12 26 993 166432 167395 F 968 94.63 1378 accept 0 ALIGNMENT 944 YS2-6j03.p1k chr15 37 1118 973229 974318 F 1082 96.77 1273 ambiguous_trans 3 ALIGNMENT 923 YS2-6j03.p1k chr04 37 1118 984112 985201 F 1082 96.12 1273 ambiguous_trans 8 ALIGNMENT 644 YS2-6j04.q1k chr12 839 26 463179 463990 C 814 93.61 1328 reject_low 1 ALIGNMENT 897 YS2-6j04.p1k chr12 34 1074 461929 462979 F 1041 96.06 1185 reject_low 1 ALIGNMENT 913 YS2-6j04.p1k chr12 34 1173 452792 453947 F 1140 94.21 1185 accept 0 ALIGNMENT 644 YS2-6j04.q1k chr12 839 26 454042 454853 C 814 93.61 1328 accept 0 ALIGNMENT 665 YS2-6j05.q1k chr15 854 2 1014763 1015609 C 853 93.90 1288 accept 0 ALIGNMENT 919 YS2-6j05.p1k chr15 35 1160 1013763 1014900 F 1126 95.47 1330 accept 0 ALIGNMENT 831 YS2-6j06.p1k chr01 73 1125 10707 11767 F 1053 95.16 1341 accept 0 ALIGNMENT 709 YS2-6j07.q1k chr04 987 47 1478119 1479056 C 941 92.45 1363 accept 0 ALIGNMENT 920 YS2-6j07.p1k chr04 37 1168 1473750 1474892 F 1132 95.76 1367 accept 0 ALIGNMENT 185 YS2-6j09.p1k chr03 233 31 217379 217583 C 203 97.54 251 accept 0 ALIGNMENT 298 YS2-6j09.q1k vc_4 425 1 5233 5654 C 425 91.06 952 reject_vc 3 ALIGNMENT 315 YS2-6j09.q1k vc_5 1 528 2556 3078 F 528 87.88 952 reject_vc 1 ALIGNMENT 249 YS2-6j09.q1k vc_2 1 302 2322 2623 F 302 94.37 952 reject_vc 5 ALIGNMENT 307 YS2-6j09.q1k vc_7 435 1 2141 2569 C 435 91.26 952 reject_vc 2 ALIGNMENT 195 YS2-6j09.q1k vc_7 302 53 4923 5172 C 250 92.80 952|0,1 reject_vc 7 ALIGNMENT 249 YS2-6j09.q1k vc_3 1 302 2689 2990 F 302 94.37 952 reject_vc 6 ALIGNMENT 0 YS2-6j09.q1k vc_7 53 54 5172 6360 C 0 0.00 952 reject_vc 7 ALIGNMENT 249 YS2-6j09.q1k vc_1 1 302 2689 2990 F 302 94.37 952 reject_vc 4 ALIGNMENT 51 YS2-6j09.q1k vc_7 54 3 6360 6411 C 52 100.00 952|1,0 reject_vc 7 ALIGNMENT 0 YS2-6j09.p1k chr03 251 234 217380 217379 C 18 0.00 251 accept 0 ALIGNMENT 991 YS2-6j10.p1k chr10 1231 33 240003 241211 C 1199 95.41 1364 accept 0 ALIGNMENT 741 YS2-6j10.q1k chr10 17 969 235803 236769 F 953 93.81 1378 accept 0 ALIGNMENT 859 YS2-6j11.p1k chr16 34 1007 739091 740074 F 974 97.13 1307 accept 0 ALIGNMENT 785 YS2-6j11.q1k chr16 1065 28 742914 743929 C 1038 94.22 1343 accept 0 ALIGNMENT 156 YS2-6j12.p1k chr07 45 262 7113 7331 F 218 91.74 1212 reject_low 8 ALIGNMENT 320 YS2-6j12.p1k chr03 550 37 306846 307341 C 514 89.69 1212 reject_low 2 ALIGNMENT 0 YS2-6j12.q1k chr12 62 367 1059293 1059292 F 306 0.00 1296 reject_low 3 ALIGNMENT 148 YS2-6j12.p1k chr03 1028 734 303920 304222 C 295 85.08 1212 reject_low 2 ALIGNMENT 191 YS2-6j12.q1k chr12 368 686 1059293 1059612 F 319 87.15 1296 reject_low 3 ALIGNMENT 0 YS2-6j12.p1k chr11 254 820 2850 2849 F 567 0.00 1212 reject_low 7 ALIGNMENT 750 YS2-6j12.q1k chr09 992 22 9999 10974 C 971 93.41 1296 reject_low 1 ALIGNMENT 0 YS2-6j12.p1k chr03 733 551 304223 306845 C 183 0.00 1212 reject_low 2 ALIGNMENT 280 YS2-6j12.p1k chr12 428 39 1062077 1062465 C 390 92.05 1212 reject_low 3 ALIGNMENT 376 YS2-6j12.p1k chr15 57 776 12381 13095 F 720 85.69 1212 reject_low 4 ALIGNMENT 891 YS2-6j12.p1k chr09 37 1110 9608 10694 F 1074 95.44 1212 reject_low 1 ALIGNMENT 0 YS2-6j12.q1k chr03 62 168 303700 303699 F 107 0.00 1296 reject_low 2 ALIGNMENT 0 YS2-6j12.p1k chr12 733 429 1059617 1062076 C 305 0.00 1212 reject_low 3 ALIGNMENT 0 YS2-6j12.p1k chr09 820 263 433246 433245 C 558 0.00 1212 reject_low 6 ALIGNMENT 891 YS2-6j12.p1k chr10 37 1110 9591 10677 F 1074 95.44 1212 accept_tel 0 ALIGNMENT 0 YS2-6j12.p1k chr07 263 820 7331 7330 F 558 0.00 1212 reject_low 8 ALIGNMENT 0 YS2-6j12.p1k chr14 820 646 780863 780862 C 175 0.00 1212 reject_low 5 ALIGNMENT 164 YS2-6j12.p1k chr11 37 253 2634 2850 F 217 93.09 1212 reject_low 7 ALIGNMENT 145 YS2-6j12.p1k chr01 37 217 2619 2800 F 181 93.92 1212 reject_low 9 ALIGNMENT 380 YS2-6j12.q1k chr03 169 686 303700 304218 F 518 91.51 1296 reject_low 2 ALIGNMENT 171 YS2-6j12.p1k chr09 262 37 433245 433473 C 226 92.92 1212 reject_low 6 ALIGNMENT 750 YS2-6j12.q1k chr10 1033 22 9941 10957 C 1012 92.49 1296 accept_tel 0 ALIGNMENT 0 YS2-6j12.p1k chr01 218 820 2800 2799 F 603 0.00 1212 reject_low 9 ALIGNMENT 0 YS2-6j12.p1k chr15 777 820 13095 13094 F 44 0.00 1212 reject_low 4 ALIGNMENT 140 YS2-6j12.p1k chr12 1029 734 1059313 1059616 C 296 84.12 1212 reject_low 3 ALIGNMENT 306 YS2-6j12.p1k chr14 645 37 780862 781464 C 609 85.39 1212 reject_low 5 ALIGNMENT 218 YS2-6j13.q1k vc_7 816 530 2442 2727 C 287 92.68 1447 reject_low 6 ALIGNMENT 38 YS2-6j13.q1k vc_7 493 530 13525 13562 F 38 100.00 1447 reject_low 15 ALIGNMENT 0 YS2-6j13.q1k vc_7 62 492 13525 13524 F 431 0.00 1447 reject_low 15 ALIGNMENT 0 YS2-6j13.q1k chr10 490 535 102346 102345 F 46 0.00 1447 accept_chi 1 ALIGNMENT 218 YS2-6j13.q1k vc_2 530 816 2164 2449 F 287 92.68 1447 reject_low 3 ALIGNMENT 218 YS2-6j13.q1k vc_3 530 816 2531 2816 F 287 92.68 1447 reject_low 4 ALIGNMENT 36 YS2-6j13.q1k vc_5 527 492 1 36 C 36 100.00 1447 reject_low 16 ALIGNMENT 86 YS2-6j13.q1k vc_4 616 530 1448 1534 C 87 100.00 1447 reject_low 10 ALIGNMENT 0 YS2-6j13.q1k vc_1 489 62 2513 2512 C 428 0.00 1447 reject_low 11 ALIGNMENT 39 YS2-6j13.q1k vc_5 530 492 5025 5063 C 39 100.00 1447 reject_low 14 ALIGNMENT 218 YS2-6j13.q1k vc_5 530 816 2398 2683 F 287 92.68 1447 reject_low 5 ALIGNMENT 0 YS2-6j13.q1k vc_4 62 489 5831 5830 F 428 0.00 1447 reject_low 9 ALIGNMENT 41 YS2-6j13.q1k vc_3 530 490 2472 2512 C 41 100.00 1447 reject_low 13 ALIGNMENT 0 YS2-6j13.q1k vc_2 62 529 2164 2163 F 468 0.00 1447 reject_low 3 ALIGNMENT 145 YS2-6j13.q1k vc_4 530 691 6353 6514 F 162 96.91 1447|1,0 reject_low 9 ALIGNMENT 458 YS2-6j13.p1k chr10 526 33 101851 102346 C 494 99.19 545 accept_chi 0 ALIGNMENT 41 YS2-6j13.q1k vc_4 490 530 5831 5871 F 41 100.00 1447 reject_low 9 ALIGNMENT 0 YS2-6j13.q1k vc_7 529 62 2728 2727 C 468 0.00 1447 reject_low 6 ALIGNMENT 211 YS2-6j13.q1k vc_4 816 530 5525 5812 C 287 91.99 1447 reject_low 7 ALIGNMENT 0 YS2-6j13.q1k vc_5 62 529 2398 2397 F 468 0.00 1447 reject_low 5 ALIGNMENT 0 YS2-6j13.q1k vc_3 62 529 2531 2530 F 468 0.00 1447 reject_low 4 ALIGNMENT 0 YS2-6j13.q1k vc_1 62 529 2531 2530 F 468 0.00 1447 reject_low 2 ALIGNMENT 218 YS2-6j13.q1k vc_1 530 816 2531 2816 F 287 92.68 1447 reject_low 2 ALIGNMENT 0 YS2-6j13.q1k vc_3 489 62 2513 2512 C 428 0.00 1447 reject_low 13 ALIGNMENT 454 YS2-6j13.q1k chr10 6 489 101863 102346 F 484 99.38 1447 accept_chi 1 ALIGNMENT 0 YS2-6j13.q1k vc_2 489 62 2146 2145 C 428 0.00 1447 reject_low 12 ALIGNMENT 145 YS2-6j13.q1k vc_4 530 691 126 287 F 162 96.91 1447 reject_low 8 ALIGNMENT 0 YS2-6j13.q1k vc_4 531 530 5872 6353 F 0 0.00 1447 reject_low 9 ALIGNMENT 0 YS2-6j13.q1k vc_5 491 62 37 36 C 430 0.00 1447 reject_low 16 ALIGNMENT 0 YS2-6j13.q1k vc_4 529 62 5813 5812 C 468 0.00 1447 reject_low 7 ALIGNMENT 0 YS2-6j13.q1k vc_4 529 62 1535 1534 C 468 0.00 1447 reject_low 10 ALIGNMENT 41 YS2-6j13.q1k vc_1 530 490 2472 2512 C 41 100.00 1447 reject_low 11 ALIGNMENT 0 YS2-6j13.p1k chr10 545 527 101852 101851 C 19 0.00 545 accept_chi 0 ALIGNMENT 0 YS2-6j13.q1k vc_4 62 529 126 125 F 468 0.00 1447 reject_low 8 ALIGNMENT 0 YS2-6j13.q1k vc_5 491 62 5064 5063 C 430 0.00 1447 reject_low 14 ALIGNMENT 41 YS2-6j13.q1k vc_2 530 490 2105 2145 C 41 100.00 1447 reject_low 12 ALIGNMENT 416 YS2-6j14.p1k chr08 1047 220 342229 343052 C 828 84.30 1389 accept 0 ALIGNMENT 992 YS2-6j15.p1k chr14 1146 31 394664 395787 C 1116 97.04 1299 accept 0 ALIGNMENT 554 YS2-6j15.q1k chr14 31 737 390036 390741 F 707 93.78 1442 accept 0 ALIGNMENT 0 YS2-6j17.q1k vc_4 119 422 126 125 F 304 0.00 1489 reject_low 8 ALIGNMENT 0 YS2-6j17.q1k vc_2 382 119 2146 2145 C 264 0.00 1489 reject_low 13 ALIGNMENT 0 YS2-6j17.p1k chr16 375 393 790485 790484 F 19 0.00 393 accept_chi 0 ALIGNMENT 0 YS2-6j17.q1k vc_2 119 422 2164 2163 F 304 0.00 1489 reject_low 3 ALIGNMENT 221 YS2-6j17.q1k vc_5 423 712 2398 2684 F 290 93.10 1489 reject_low 5 ALIGNMENT 139 YS2-6j17.q1k vc_4 423 584 126 287 F 162 95.68 1489 reject_low 8 ALIGNMENT 38 YS2-6j17.q1k vc_2 423 383 2105 2145 C 41 97.56 1489 reject_low 13 ALIGNMENT 0 YS2-6j17.q1k vc_7 422 119 2728 2727 C 304 0.00 1489 reject_low 6 ALIGNMENT 76 YS2-6j17.q1k vc_4 511 423 1446 1534 C 89 95.51 1489 reject_low 10 ALIGNMENT 38 YS2-6j17.q1k vc_4 383 423 5831 5871 F 41 97.56 1489 reject_low 9 ALIGNMENT 40 YS2-6j17.q1k vc_7 634 583 6360 6411 C 52 92.31 1489 reject_low 11 ALIGNMENT 221 YS2-6j17.q1k vc_2 423 712 2164 2450 F 290 93.10 1489 reject_low 3 ALIGNMENT 221 YS2-6j17.q1k vc_7 712 423 2441 2727 C 290 93.10 1489 reject_low 6 ALIGNMENT 0 YS2-6j17.q1k vc_4 422 119 1535 1534 C 304 0.00 1489 reject_low 10 ALIGNMENT 0 YS2-6j17.q1k vc_3 119 422 2531 2530 F 304 0.00 1489 reject_low 4 ALIGNMENT 0 YS2-6j17.q1k vc_5 384 119 5064 5063 C 266 0.00 1489 reject_low 15 ALIGNMENT 36 YS2-6j17.q1k vc_5 423 385 5025 5063 C 39 97.44 1489 reject_low 15 ALIGNMENT 35 YS2-6j17.q1k vc_7 386 423 13525 13562 F 38 97.37 1489 reject_low 16 ALIGNMENT 38 YS2-6j17.q1k vc_3 423 383 2472 2512 C 41 97.56 1489 reject_low 14 ALIGNMENT 221 YS2-6j17.q1k vc_1 423 712 2531 2817 F 290 93.10 1489 reject_low 2 ALIGNMENT 38 YS2-6j17.q1k vc_1 423 383 2472 2512 C 41 97.56 1489 reject_low 12 ALIGNMENT 0 YS2-6j17.q1k vc_1 382 119 2513 2512 C 264 0.00 1489 reject_low 12 ALIGNMENT 0 YS2-6j17.q1k vc_4 119 382 5831 5830 F 264 0.00 1489 reject_low 9 ALIGNMENT 0 YS2-6j17.q1k vc_4 424 423 5872 6353 F 0 0.00 1489 reject_low 9 ALIGNMENT 314 YS2-6j17.q1k chr16 383 43 790146 790485 C 341 97.65 1489 accept_chi 1 ALIGNMENT 335 YS2-6j17.p1k chr16 34 374 790146 790485 F 341 99.71 393 accept_chi 0 ALIGNMENT 0 YS2-6j17.q1k vc_1 119 422 2531 2530 F 304 0.00 1489 reject_low 2 ALIGNMENT 0 YS2-6j17.q1k vc_3 382 119 2513 2512 C 264 0.00 1489 reject_low 14 ALIGNMENT 139 YS2-6j17.q1k vc_4 423 584 6353 6514 F 162 95.68 1489|1,0 reject_low 9 ALIGNMENT 33 YS2-6j17.q1k vc_5 420 385 1 36 C 36 97.22 1489 reject_low 17 ALIGNMENT 0 YS2-6j17.q1k vc_7 119 385 13525 13524 F 267 0.00 1489 reject_low 16 ALIGNMENT 221 YS2-6j17.q1k vc_3 423 712 2531 2817 F 290 93.10 1489 reject_low 4 ALIGNMENT 0 YS2-6j17.q1k vc_4 422 119 5813 5812 C 304 0.00 1489 reject_low 7 ALIGNMENT 214 YS2-6j17.q1k vc_4 712 423 5524 5812 C 290 92.41 1489 reject_low 7 ALIGNMENT 0 YS2-6j17.q1k vc_5 384 119 37 36 C 266 0.00 1489 reject_low 17 ALIGNMENT 0 YS2-6j17.q1k vc_7 582 119 6412 6411 C 464 0.00 1489 reject_low 11 ALIGNMENT 0 YS2-6j17.q1k vc_5 119 422 2398 2397 F 304 0.00 1489 reject_low 5 ALIGNMENT 0 YS2-6j18.p1k vc_7 62 930 13562 13561 F 869 0.00 1280 reject_low 7 ALIGNMENT 145 YS2-6j18.p1k vc_2 1144 931 1889 2105 C 214 90.19 1280 reject_low 2 ALIGNMENT 145 YS2-6j18.p1k vc_5 1144 931 4809 5025 C 214 90.19 1280 reject_low 5 ALIGNMENT 24 YS2-6j18.p1k vc_1 961 931 2441 2472 C 31 93.55 1280 reject_low 8 ALIGNMENT 0 YS2-6j18.p1k vc_3 930 62 2473 2472 C 869 0.00 1280 reject_low 9 ALIGNMENT 145 YS2-6j18.p1k vc_4 931 1144 5871 6087 F 214 89.72 1280 reject_low 4 ALIGNMENT 0 YS2-6j18.p1k vc_1 930 62 2473 2472 C 869 0.00 1280 reject_low 8 ALIGNMENT 145 YS2-6j18.p1k vc_7 931 1144 13562 13778 F 214 89.72 1280 reject_low 7 ALIGNMENT 145 YS2-6j18.p1k vc_1 1144 931 1889 2105 C 214 90.19 1280 reject_low 1 ALIGNMENT 0 YS2-6j18.p1k vc_4 62 930 5871 5870 F 869 0.00 1280 reject_low 4 ALIGNMENT 0 YS2-6j18.p1k vc_7 62 930 100 99 F 869 0.00 1280 reject_low 6 ALIGNMENT 24 YS2-6j18.p1k vc_3 961 931 2441 2472 C 31 93.55 1280 reject_low 9 ALIGNMENT 145 YS2-6j18.p1k vc_3 1144 931 1889 2105 C 214 90.19 1280 reject_low 3 ALIGNMENT 738 YS2-6j18.p1k chr12 36 912 394100 394981 F 877 95.67 1280 accept 0 ALIGNMENT 0 YS2-6j18.p1k vc_3 930 62 2106 2105 C 869 0.00 1280 reject_low 3 ALIGNMENT 0 YS2-6j18.p1k vc_2 930 62 2106 2105 C 869 0.00 1280 reject_low 2 ALIGNMENT 0 YS2-6j18.p1k vc_5 930 62 5026 5025 C 869 0.00 1280 reject_low 5 ALIGNMENT 0 YS2-6j18.p1k vc_1 930 62 2106 2105 C 869 0.00 1280 reject_low 1 ALIGNMENT 475 YS2-6j18.q1k chr12 664 1 394265 394929 C 664 91.57 1231 accept 0 ALIGNMENT 145 YS2-6j18.p1k vc_7 931 1144 100 316 F 214 89.72 1280 reject_low 6 ALIGNMENT 0 YS2-6j20.q1k vc_2 343 62 2146 2145 C 282 0.00 1304 reject_low 16 ALIGNMENT 0 YS2-6j20.q1k vc_5 341 62 41 40 C 280 0.00 1304 reject_low 19 ALIGNMENT 150 YS2-6j20.q1k vc_4 384 545 6353 6514 F 162 98.15 1304|1,0 reject_low 13 ALIGNMENT 42 YS2-6j20.q1k vc_4 779 844 1548 1612 F 66 89.39 1304 reject_low 14 ALIGNMENT 41 YS2-6j20.q1k vc_2 384 344 2105 2145 C 41 100.00 1304 reject_low 16 ALIGNMENT 0 YS2-6j20.q1k vc_7 62 346 13525 13524 F 285 0.00 1304 reject_low 21 ALIGNMENT 392 YS2-6j20.q1k vc_2 384 844 2164 2623 F 461 95.44 1304 reject_low 10 ALIGNMENT 38 YS2-6j20.q1k vc_7 347 384 63 100 F 38 100.00 1304 reject_low 20 ALIGNMENT 41 YS2-6j20.q1k vc_4 344 384 5831 5871 F 41 100.00 1304 reject_low 13 ALIGNMENT 289 YS2-6j20.p1k vc_1 480 1 1261 1749 C 480 88.33 514 reject_low 3 ALIGNMENT 0 YS2-6j20.q1k vc_7 543 62 6412 6411 C 482 0.00 1304 reject_low 12 ALIGNMENT 37 YS2-6j20.q1k vc_5 381 342 1 40 C 40 97.50 1304 reject_low 19 ALIGNMENT 283 YS2-6j20.p1k vc_7 1 480 13918 14406 F 480 87.92 514 reject_low 7 ALIGNMENT 420 YS2-6j20.q1k vc_4 956 384 5234 5812 C 573 91.80 1304 reject_low 8 ALIGNMENT 0 YS2-6j20.q1k vc_7 383 62 2728 2727 C 322 0.00 1304 reject_vc 1 ALIGNMENT 42 YS2-6j20.q1k vc_4 844 779 6275 6339 C 66 89.39 1304 reject_low 22 ALIGNMENT 450 YS2-6j20.q1k vc_7 1165 384 1935 2727 C 782 87.08 1304 reject_vc 1 ALIGNMENT 0 YS2-6j20.q1k vc_5 62 383 2398 2397 F 322 0.00 1304 reject_vc 0 ALIGNMENT 48 YS2-6j20.q1k vc_7 595 544 6360 6411 C 52 98.08 1304|1,0 reject_low 12 ALIGNMENT 0 YS2-6j20.q1k vc_2 62 383 2164 2163 F 322 0.00 1304 reject_low 10 ALIGNMENT 0 YS2-6j20.q1k vc_7 385 666 100 99 F 282 0.00 1304 reject_low 20 ALIGNMENT 0 YS2-6j20.q1k vc_1 666 385 2473 2472 C 282 0.00 1304 reject_low 15 ALIGNMENT 0 YS2-6j20.q1k vc_4 383 62 5813 5812 C 322 0.00 1304 reject_low 8 ALIGNMENT 0 YS2-6j20.q1k vc_4 62 343 5831 5830 F 282 0.00 1304 reject_low 13 ALIGNMENT 450 YS2-6j20.q1k vc_5 384 1165 2398 3190 F 782 86.96 1304 reject_vc 0 ALIGNMENT 0 YS2-6j20.q1k vc_4 62 383 126 125 F 322 0.00 1304 reject_low 14 ALIGNMENT 0 YS2-6j20.q1k vc_1 343 62 2513 2512 C 282 0.00 1304 reject_low 15 ALIGNMENT 289 YS2-6j20.p1k vc_6 1 480 3712 4200 F 480 88.33 514 reject_low 6 ALIGNMENT 0 YS2-6j20.q1k vc_7 62 346 63 62 F 285 0.00 1304 reject_low 20 ALIGNMENT 0 YS2-6j20.q1k vc_5 341 62 5068 5067 C 280 0.00 1304 reject_low 18 ALIGNMENT 0 YS2-6j20.q1k vc_3 343 62 2513 2512 C 282 0.00 1304 reject_low 17 ALIGNMENT 0 YS2-6j20.q1k vc_4 383 62 1535 1534 C 322 0.00 1304 reject_low 23 ALIGNMENT 38 YS2-6j20.q1k vc_7 347 384 13525 13562 F 38 100.00 1304 reject_low 21 ALIGNMENT 303 YS2-6j20.q1k chr04 21 343 574270 574593 F 323 98.76 1304 reject_low 2 ALIGNMENT 41 YS2-6j20.q1k vc_1 384 344 2472 2512 C 41 100.00 1304 reject_low 15 ALIGNMENT 82 YS2-6j20.q1k vc_4 470 384 1448 1534 C 87 98.85 1304 reject_low 23 ALIGNMENT 0 YS2-6j20.q1k vc_4 546 666 6514 6513 F 121 0.00 1304 reject_low 13 ALIGNMENT 289 YS2-6j20.p1k vc_2 480 1 1261 1749 C 480 88.33 514 reject_low 4 ALIGNMENT 289 YS2-6j20.p1k vc_3 480 1 1261 1749 C 480 88.33 514 reject_low 5 ALIGNMENT 0 YS2-6j20.q1k vc_4 546 778 288 1547 F 233 0.00 1304 reject_low 14 ALIGNMENT 0 YS2-6j20.q1k vc_7 594 595 5172 6360 C 0 0.00 1304 reject_low 12 ALIGNMENT 0 YS2-6j20.q1k vc_4 385 384 5872 6353 F 0 0.00 1304 reject_low 13 ALIGNMENT 42 YS2-6j20.q1k vc_4 844 779 48 112 C 66 89.39 1304 reject_low 23 ALIGNMENT 0 YS2-6j20.q1k vc_3 666 385 2473 2472 C 282 0.00 1304 reject_low 17 ALIGNMENT 392 YS2-6j20.q1k vc_3 384 844 2531 2990 F 461 95.44 1304 reject_low 11 ALIGNMENT 392 YS2-6j20.q1k vc_1 384 844 2531 2990 F 461 95.44 1304 reject_low 9 ALIGNMENT 0 YS2-6j20.q1k vc_2 666 385 2106 2105 C 282 0.00 1304 reject_low 16 ALIGNMENT 194 YS2-6j20.q1k vc_7 844 594 4923 5172 C 251 92.83 1304|0,1 reject_low 12 ALIGNMENT 40 YS2-6j20.q1k vc_5 384 342 5025 5067 C 43 97.67 1304 reject_low 18 ALIGNMENT 0 YS2-6j20.q1k vc_7 385 666 13562 13561 F 282 0.00 1304 reject_low 21 ALIGNMENT 0 YS2-6j20.q1k vc_4 778 471 113 1447 C 308 0.00 1304 reject_low 23 ALIGNMENT 0 YS2-6j20.q1k vc_4 778 62 6340 6339 C 717 0.00 1304 reject_low 22 ALIGNMENT 150 YS2-6j20.q1k vc_4 384 545 126 287 F 162 98.15 1304 reject_low 14 ALIGNMENT 41 YS2-6j20.q1k vc_3 384 344 2472 2512 C 41 100.00 1304 reject_low 17 ALIGNMENT 0 YS2-6j20.q1k vc_5 666 385 5026 5025 C 282 0.00 1304 reject_low 18 ALIGNMENT 283 YS2-6j20.p1k vc_7 1 480 456 944 F 480 87.92 514 reject_vc 1 ALIGNMENT 0 YS2-6j20.q1k vc_1 62 383 2531 2530 F 322 0.00 1304 reject_low 9 ALIGNMENT 0 YS2-6j20.q1k vc_5 666 382 2 1 C 285 0.00 1304 reject_low 19 ALIGNMENT 289 YS2-6j20.p1k vc_5 480 1 4181 4669 C 480 88.33 514 reject_vc 0 ALIGNMENT 0 YS2-6j20.q1k vc_3 62 383 2531 2530 F 322 0.00 1304 reject_low 11 ALIGNMENT 0 YS2-6j20.q1k chr04 344 666 574593 574592 F 323 0.00 1304 reject_low 2 ALIGNMENT 605 YS2-6j21.q1k chr05 784 10 419430 420199 C 775 93.81 1281 accept 0 ALIGNMENT 948 YS2-6j21.p1k chr05 26 1105 413670 414752 F 1080 96.76 1225 accept 0 ALIGNMENT 379 YS2-6j23.q1k vc_5 1 541 2556 3091 F 541 91.13 878 reject_vc 1 ALIGNMENT 0 YS2-6j23.q1k vc_7 53 54 5172 6360 C 0 0.00 878 reject_vc 7 ALIGNMENT 47 YS2-6j23.q1k vc_4 302 238 48 112 C 65 93.85 878 reject_low 9 ALIGNMENT 271 YS2-6j23.q1k vc_1 1 302 2689 2990 F 302 97.02 878 reject_vc 4 ALIGNMENT 271 YS2-6j23.q1k vc_2 1 302 2322 2623 F 302 97.02 878 reject_vc 5 ALIGNMENT 51 YS2-6j23.q1k vc_7 54 3 6360 6411 C 52 100.00 878|1,0 reject_vc 7 ALIGNMENT 0 YS2-6j23.q1k vc_4 237 62 113 112 C 176 0.00 878 reject_low 9 ALIGNMENT 217 YS2-6j23.q1k vc_7 302 53 4923 5172 C 250 96.00 878|0,1 reject_vc 7 ALIGNMENT 0 YS2-6j23.p1k chr12 196 213 322172 322171 F 18 0.00 213 accept 0 ALIGNMENT 144 YS2-6j23.p1k chr12 30 195 322005 322172 F 166 96.99 213 accept 0 ALIGNMENT 0 YS2-6j23.q1k vc_7 304 303 4700 4922 C 2 0.00 878 reject_vc 7 ALIGNMENT 0 YS2-6j23.q1k vc_4 303 310 1613 1881 F 8 0.00 878 reject_vc 8 ALIGNMENT 47 YS2-6j23.q1k vc_4 302 238 6275 6339 C 65 93.85 878 reject_low 10 ALIGNMENT 73 YS2-6j23.q1k vc_7 421 305 4583 4699 C 117 88.03 878 reject_vc 7 ALIGNMENT 271 YS2-6j23.q1k vc_3 1 302 2689 2990 F 302 97.02 878 reject_vc 6 ALIGNMENT 47 YS2-6j23.q1k vc_4 238 302 1548 1612 F 65 93.85 878 reject_vc 8 ALIGNMENT 337 YS2-6j23.q1k vc_4 421 1 5232 5654 C 421 93.82 878 reject_vc 3 ALIGNMENT 0 YS2-6j23.q1k vc_4 237 62 6340 6339 C 176 0.00 878 reject_low 10 ALIGNMENT 0 YS2-6j23.q1k vc_4 62 237 1548 1547 F 176 0.00 878 reject_vc 8 ALIGNMENT 379 YS2-6j23.q1k vc_7 541 1 2034 2569 C 541 91.13 878 reject_vc 2 ALIGNMENT 105 YS2-6j23.q1k vc_4 311 541 1882 2107 F 231 83.98 878 reject_vc 8 ALIGNMENT 0 YS2-6j24.p1k chr13 205 62 281946 281945 C 144 0.00 1162 reject_low 1 ALIGNMENT 795 YS2-6j24.p1k chr13 852 26 278390 279218 C 827 99.15 1162 accept 0 ALIGNMENT 128 YS2-6j24.p1k chr13 523 206 281628 281945 C 318 80.50 1162 reject_low 1 ALIGNMENT 33 YS2-6j24.q1k chr13 48 205 281320 281477 F 158 74.05 1345 reject_low 2 ALIGNMENT 120 YS2-6j24.q1k chr13 356 586 281628 281858 F 231 84.42 1345 reject_low 2 ALIGNMENT 0 YS2-6j24.p1k chr13 673 524 281478 281627 C 150 0.00 1162 reject_low 1 ALIGNMENT 31 YS2-6j24.p1k chr13 811 674 281340 281477 C 138 74.64 1162 reject_low 1 ALIGNMENT 0 YS2-6j24.q1k chr13 206 355 281478 281627 F 150 0.00 1345 reject_low 2 ALIGNMENT 680 YS2-6j24.q1k chr13 26 858 278388 279211 F 833 95.20 1345 accept 0 ALIGNMENT 190 YS2-6k01.p1k chr12 311 37 451419 451706 C 275 92.36 1253 reject_low 1 ALIGNMENT 639 YS2-6k01.p1k chr12 1013 37 459818 460843 C 977 90.79 1253 accept 0 ALIGNMENT 0 YS2-6k01.p1k chr12 749 312 451420 451419 C 438 0.00 1253 reject_low 1 ALIGNMENT 697 YS2-6k02.q1k chr06 25 870 144531 145374 F 846 96.10 1389 accept 0 ALIGNMENT 920 YS2-6k02.p1k chr06 1064 31 146122 147170 C 1034 97.29 1281 accept 0 ALIGNMENT 749 YS2-6k03.q1k chr12 27 1151 339255 340389 F 1125 90.22 1270 accept 0 ALIGNMENT 888 YS2-6k03.p1k chr12 1013 30 343138 344134 C 984 98.07 1270 accept 0 ALIGNMENT 49 YS2-6k04.p1k chr04 1080 748 649415 649752 C 333 72.67 1341 reject_low 14 ALIGNMENT 52 YS2-6k04.p1k chr01 1080 748 164161 164498 C 333 73.27 1341 reject_low 27 ALIGNMENT 0 YS2-6k04.p1k chr01 747 62 164499 164498 C 686 0.00 1341 reject_low 27 ALIGNMENT 942 YS2-6k04.p1k chr12 31 1181 942118 943289 F 1151 95.92 1341 ambiguous_trans 8 ALIGNMENT 960 YS2-6k04.p1k chr15 1181 31 707923 709094 C 1151 96.44 1341 ambiguous_trans 0 ALIGNMENT 52 YS2-6k04.p1k chr04 1080 748 990637 990974 C 333 73.27 1341 reject_low 28 ALIGNMENT 954 YS2-6k04.p1k chr12 1181 31 979596 980767 C 1151 96.26 1341 reject_low 11 ALIGNMENT 288 YS2-6k04.q1k chr06 459 1 142831 143279 C 459 89.76 842 ambiguous_trans 4 ALIGNMENT 936 YS2-6k04.p1k chr14 1181 31 565892 567063 C 1151 95.74 1341 ambiguous_trans 10 ALIGNMENT 279 YS2-6k04.q1k chr12 459 1 598027 598475 C 459 89.11 842 reject_low 19 ALIGNMENT 945 YS2-6k04.p1k chr02 31 1181 30570 31741 F 1151 96.00 1341 ambiguous_trans 3 ALIGNMENT 55 YS2-6k04.p1k chr04 1080 748 882216 882553 C 333 73.27 1341 reject_low 13 ALIGNMENT 0 YS2-6k04.p1k chr12 62 747 652488 652487 F 686 0.00 1341 reject_low 15 ALIGNMENT 286 YS2-6k04.q1k chr14 1 459 562621 563069 F 459 89.76 842 ambiguous_trans 10 ALIGNMENT 942 YS2-6k04.p1k chr07 1181 31 572604 573775 C 1151 95.92 1341 ambiguous_trans 7 ALIGNMENT 277 YS2-6k04.q1k chr07 1 459 562436 562884 F 459 89.11 842 reject_low 16 ALIGNMENT 210 YS2-6k04.q1k chr13 459 1 189048 189496 C 459 84.10 842 reject_low 22 ALIGNMENT 954 YS2-6k04.p1k chr04 31 1181 872745 873916 F 1151 96.26 1341 ambiguous_trans 1 ALIGNMENT 0 YS2-6k04.p1k chr04 747 62 649753 649752 C 686 0.00 1341 reject_low 14 ALIGNMENT 282 YS2-6k04.q1k chr14 459 1 524026 524474 C 459 89.32 842 reject_low 18 ALIGNMENT 942 YS2-6k04.p1k chr04 1181 31 517543 518714 C 1151 95.92 1341 ambiguous_trans 6 ALIGNMENT 55 YS2-6k04.p1k chr16 748 1080 58117 58454 F 333 73.27 1341 reject_low 26 ALIGNMENT 174 YS2-6k04.q1k chr13 459 1 201215 201663 C 459 81.48 842 reject_low 25 ALIGNMENT 942 YS2-6k04.p1k chr07 31 1181 812381 813552 F 1151 95.92 1341 ambiguous_trans 5 ALIGNMENT 210 YS2-6k04.q1k chr16 459 1 849295 849743 C 459 84.10 842 reject_low 23 ALIGNMENT 936 YS2-6k04.p1k chr03 31 1181 85739 86910 F 1151 95.74 1341 ambiguous_trans 9 ALIGNMENT 228 YS2-6k04.q1k chr10 459 1 477261 477709 C 459 85.40 842 reject_low 21 ALIGNMENT 288 YS2-6k04.q1k chr04 1 458 514272 514719 F 458 89.96 842 ambiguous_trans 6 ALIGNMENT 290 YS2-6k04.q1k chr04 1 459 646086 646534 F 459 89.98 842 reject_low 14 ALIGNMENT 285 YS2-6k04.q1k chr12 459 1 946112 946560 C 459 89.54 842 ambiguous_trans 8 ALIGNMENT 293 YS2-6k04.q1k chr15 1 459 704652 705100 F 459 90.20 842 ambiguous_trans 0 ALIGNMENT 294 YS2-6k04.q1k chr04 459 1 876739 877187 C 459 90.20 842 ambiguous_trans 1 ALIGNMENT 294 YS2-6k04.q1k chr15 459 1 975205 975653 C 459 90.20 842 ambiguous_trans 2 ALIGNMENT 942 YS2-6k04.p1k chr06 31 1181 138837 140008 F 1151 95.92 1341 ambiguous_trans 4 ALIGNMENT 288 YS2-6k04.q1k chr04 459 1 1211574 1212022 C 459 89.76 842 reject_low 17 ALIGNMENT 0 YS2-6k04.p1k chr10 62 747 479627 479626 F 686 0.00 1341 reject_low 29 ALIGNMENT 52 YS2-6k04.p1k chr10 748 1080 479627 479964 F 333 72.97 1341 reject_low 29 ALIGNMENT 277 YS2-6k04.q1k chr16 1 459 805230 805678 F 459 89.11 842 reject_low 20 ALIGNMENT 288 YS2-6k04.q1k chr02 459 1 34564 35012 C 459 89.76 842 ambiguous_trans 3 ALIGNMENT 288 YS2-6k04.q1k chr07 459 1 816375 816823 C 459 89.76 842 ambiguous_trans 5 ALIGNMENT 0 YS2-6k04.p1k chr16 62 747 58117 58116 F 686 0.00 1341 reject_low 26 ALIGNMENT 0 YS2-6k04.p1k chr04 747 62 990975 990974 C 686 0.00 1341 reject_low 28 ALIGNMENT 288 YS2-6k04.q1k chr03 459 1 89733 90181 C 459 89.76 842 ambiguous_trans 9 ALIGNMENT 0 YS2-6k04.p1k chr04 747 62 882554 882553 C 686 0.00 1341 reject_low 13 ALIGNMENT 286 YS2-6k04.q1k chr07 1 459 569332 569780 F 459 89.76 842 ambiguous_trans 7 ALIGNMENT 0 YS2-6k04.p1k chr07 730 62 566120 566119 C 669 0.00 1341 reject_low 16 ALIGNMENT 287 YS2-6k04.q1k chr04 1 459 878887 879335 F 459 89.76 842 reject_low 13 ALIGNMENT 954 YS2-6k04.p1k chr15 31 1181 971211 972382 F 1151 96.26 1341 ambiguous_trans 2 ALIGNMENT 49 YS2-6k04.p1k chr12 748 1080 652488 652825 F 333 72.67 1341 reject_low 15 ALIGNMENT 54 YS2-6k04.p1k chr07 1080 731 565765 566119 C 350 72.86 1341 reject_low 16 ALIGNMENT 945 YS2-6k04.p1k chr04 31 1181 982094 983265 F 1151 96.00 1341 reject_low 12 ALIGNMENT 202 YS2-6k04.q1k chr16 1 459 851218 851666 F 459 83.66 842 reject_low 24 ALIGNMENT 288 YS2-6k04.q1k chr12 459 1 655708 656156 C 459 89.76 842 reject_low 15 ALIGNMENT 699 YS2-6k05.q1k chr16 28 833 105275 106076 F 806 96.53 1397 accept 0 ALIGNMENT 902 YS2-6k05.p1k chr16 1141 81 105286 106356 C 1061 96.23 1362 accept 0 ALIGNMENT 908 YS2-6k06.p1k chr07 36 1064 631847 632890 F 1029 97.67 1333 accept 0 ALIGNMENT 603 YS2-6k06.q1k chr07 917 30 636198 637070 C 888 92.34 1351 accept 0 ALIGNMENT 32 YS2-6k07.q1k vc_1 234 199 2477 2512 C 36 97.22 1504 reject_low 10 ALIGNMENT 32 YS2-6k07.q1k vc_3 234 199 2477 2512 C 36 97.22 1504 reject_low 12 ALIGNMENT 254 YS2-6k07.q1k vc_2 241 634 2165 2555 F 394 89.09 1504 reject_low 2 ALIGNMENT 254 YS2-6k07.q1k vc_5 241 634 2399 2789 F 394 89.09 1504 reject_low 4 ALIGNMENT 31 YS2-6k07.q1k vc_5 234 201 5030 5063 C 34 97.06 1504 reject_low 14 ALIGNMENT 0 YS2-6k07.q1k vc_4 235 240 5867 6353 F 6 0.00 1504 reject_low 8 ALIGNMENT 44 YS2-6k07.q1k vc_7 452 400 6360 6411 C 53 96.23 1504 reject_low 15 ALIGNMENT 254 YS2-6k07.q1k vc_7 634 241 2336 2726 C 394 89.09 1504 reject_low 5 ALIGNMENT 247 YS2-6k07.q1k vc_4 634 241 5419 5811 C 394 88.58 1504 reject_low 6 ALIGNMENT 81 YS2-6k07.q1k vc_4 328 241 1446 1533 C 88 97.73 1504 reject_low 9 ALIGNMENT 254 YS2-6k07.q1k vc_3 241 634 2532 2922 F 394 89.09 1504 reject_low 3 ALIGNMENT 254 YS2-6k07.q1k vc_1 241 634 2532 2922 F 394 89.09 1504 reject_low 1 ALIGNMENT 32 YS2-6k07.q1k vc_4 199 234 5831 5866 F 36 97.22 1504 reject_low 8 ALIGNMENT 116 YS2-6k07.q1k chr01 47 199 35808 35961 F 153 92.81 1504 accept 0 ALIGNMENT 147 YS2-6k07.q1k vc_4 241 401 6354 6514 F 161 97.52 1504 reject_low 8 ALIGNMENT 147 YS2-6k07.q1k vc_4 241 401 127 287 F 161 97.52 1504 reject_low 7 ALIGNMENT 31 YS2-6k07.q1k vc_5 234 201 3 36 C 34 97.06 1504 reject_low 13 ALIGNMENT 32 YS2-6k07.q1k vc_2 234 199 2110 2145 C 36 97.22 1504 reject_low 11 ALIGNMENT 899 YS2-6k08.p1k chr16 33 1013 698949 699939 F 981 97.86 1246 accept 0 ALIGNMENT 813 YS2-6k08.q1k chr02 1004 26 477840 478814 C 979 94.89 1356 reject_low 1 ALIGNMENT 819 YS2-6k08.q1k chr16 1004 26 700767 701741 C 979 95.10 1356 accept 0 ALIGNMENT 0 YS2-6k09.p1k chrm 528 113 68613 68612 C 416 0.00 528 reject_low 12 ALIGNMENT 58 YS2-6k09.p1k chrm 127 36 2537 2626 C 92 89.13 528 reject_low 8 ALIGNMENT 0 YS2-6k09.p1k chrm 511 528 66325 66324 F 18 0.00 528 accept_chi 0 ALIGNMENT 0 YS2-6k09.q1k chrm 492 425 65936 65935 C 68 0.00 1406 accept_chi 1 ALIGNMENT 33 YS2-6k09.q1k chrm 509 461 34172 34220 C 49 91.84 1406 reject_low 18 ALIGNMENT 29 YS2-6k09.q1k vc_3 548 508 2472 2512 C 41 92.68 1406 reject_low 10 ALIGNMENT 29 YS2-6k09.q1k chrm 460 432 34214 34242 C 29 100.00 1406 reject_low 18 ALIGNMENT 118 YS2-6k09.q1k vc_4 548 709 6353 6514 F 162 91.36 1406|1,0 reject_low 2 ALIGNMENT 27 YS2-6k09.q1k chrm 465 511 84214 84261 F 47 91.49 1406 reject_low 17 ALIGNMENT 22 YS2-6k09.q1k chrm 418 446 6127 6155 F 29 93.10 1406 reject_low 19 ALIGNMENT 0 YS2-6k09.q1k chrm 414 94 85682 85681 C 321 0.00 1406 reject_low 16 ALIGNMENT 0 YS2-6k09.q1k chrm 94 431 50726 50725 F 338 0.00 1406 reject_low 15 ALIGNMENT 0 YS2-6k09.q1k chrm 431 94 34243 34242 C 338 0.00 1406 reject_low 18 ALIGNMENT 0 YS2-6k09.q1k vc_1 507 94 2513 2512 C 414 0.00 1406 reject_low 9 ALIGNMENT 38 YS2-6k09.q1k chrm 415 455 84176 84216 F 41 97.56 1406 reject_low 17 ALIGNMENT 43 YS2-6k09.p1k chrm 112 51 68612 68671 C 62 91.94 528 reject_low 12 ALIGNMENT 30 YS2-6k09.q1k chrm 432 500 50726 50788 F 69 88.41 1406 reject_low 15 ALIGNMENT 22 YS2-6k09.q1k chrm 481 511 6191 6221 F 31 96.77 1406 reject_low 19 ALIGNMENT 0 YS2-6k09.q1k vc_7 547 94 2728 2727 C 454 0.00 1406 reject_low 6 ALIGNMENT 32 YS2-6k09.q1k chrm 509 465 85597 85643 C 45 95.56 1406 reject_low 16 ALIGNMENT 0 YS2-6k09.q1k vc_4 547 94 5813 5812 C 454 0.00 1406 reject_low 5 ALIGNMENT 0 YS2-6k09.q1k vc_4 94 507 5831 5830 F 414 0.00 1406 reject_low 2 ALIGNMENT 0 YS2-6k09.q1k chrm 464 456 85644 85640 C 9 0.00 1406 reject_low 16 ALIGNMENT 52 YS2-6k09.q1k chrm 432 509 68612 68687 F 78 92.31 1406 reject_low 14 ALIGNMENT 119 YS2-6k09.q1k vc_3 548 710 2531 2693 F 163 91.41 1406 reject_low 4 ALIGNMENT 308 YS2-6k09.q1k chrm 424 32 65935 66325 C 393 98.98 1406 accept_chi 1 ALIGNMENT 0 YS2-6k09.q1k vc_1 94 547 2531 2530 F 454 0.00 1406 reject_low 3 ALIGNMENT 0 YS2-6k09.q1k chrm 94 416 2537 2536 F 323 0.00 1406 reject_low 13 ALIGNMENT 118 YS2-6k09.q1k vc_4 548 709 126 287 F 162 91.36 1406 reject_low 7 ALIGNMENT 0 YS2-6k09.q1k vc_4 549 548 5872 6353 F 0 0.00 1406 reject_low 2 ALIGNMENT 0 YS2-6k09.q1k chrm 94 417 6127 6126 F 324 0.00 1406 reject_low 19 ALIGNMENT 0 YS2-6k09.q1k vc_3 507 94 2513 2512 C 414 0.00 1406 reject_low 10 ALIGNMENT 0 YS2-6k09.q1k chrm 94 414 84176 84175 F 321 0.00 1406 reject_low 17 ALIGNMENT 0 YS2-6k09.q1k vc_4 547 94 1535 1534 C 454 0.00 1406 reject_low 11 ALIGNMENT 0 YS2-6k09.q1k chrm 447 480 6156 6190 F 34 0.00 1406 reject_low 19 ALIGNMENT 0 YS2-6k09.q1k vc_4 94 547 126 125 F 454 0.00 1406 reject_low 7 ALIGNMENT 0 YS2-6k09.q1k chrm 456 464 84217 84213 F 9 0.00 1406 reject_low 17 ALIGNMENT 0 YS2-6k09.q1k chrm 94 431 68612 68611 F 338 0.00 1406 reject_low 14 ALIGNMENT 119 YS2-6k09.q1k vc_1 548 710 2531 2693 F 163 91.41 1406 reject_low 3 ALIGNMENT 29 YS2-6k09.q1k vc_1 548 508 2472 2512 C 41 92.68 1406 reject_low 9 ALIGNMENT 318 YS2-6k09.p1k chrm 120 510 65935 66325 F 391 99.74 528 accept_chi 0 ALIGNMENT 0 YS2-6k09.q1k vc_3 94 547 2531 2530 F 454 0.00 1406 reject_low 4 ALIGNMENT 119 YS2-6k09.q1k vc_7 710 548 2565 2727 C 163 91.41 1406 reject_low 6 ALIGNMENT 29 YS2-6k09.q1k vc_4 508 548 5831 5871 F 41 92.68 1406 reject_low 2 ALIGNMENT 0 YS2-6k09.q1k chrm 460 461 34221 34213 C 0 0.00 1406 reject_low 18 ALIGNMENT 119 YS2-6k09.q1k vc_4 710 548 5650 5812 C 163 91.41 1406 reject_low 5 ALIGNMENT 71 YS2-6k09.q1k vc_4 634 548 1448 1534 C 87 94.25 1406 reject_low 11 ALIGNMENT 0 YS2-6k09.p1k chrm 528 128 2538 2537 C 401 0.00 528 reject_low 8 ALIGNMENT 75 YS2-6k09.q1k chrm 417 508 2537 2626 F 92 95.65 1406 reject_low 13 ALIGNMENT 38 YS2-6k09.q1k chrm 455 415 85641 85681 C 41 97.56 1406 reject_low 16 ALIGNMENT 0 YS2-6k09.p1k chrm 77 119 65935 65934 F 43 0.00 528 accept_chi 0 ALIGNMENT 900 YS2-6k10.p1k chr09 38 1024 241187 242181 F 987 97.67 1304 accept 0 ALIGNMENT 805 YS2-6k10.q1k chr09 1064 24 243851 244876 C 1041 93.95 1342 accept 0 ALIGNMENT 44 YS2-6k11.q1k chrm 359 302 68618 68673 C 58 94.83 1372 reject_low 3 ALIGNMENT 31 YS2-6k11.q1k chrm 386 309 473 549 C 78 82.05 1372 reject_low 4 ALIGNMENT 0 YS2-6k11.q1k chrm 271 62 50814 50813 C 210 0.00 1372 reject_low 11 ALIGNMENT 222 YS2-6k11.q1k chrm 24 333 40107 40410 F 310 95.48 1372 reject_bad_break 0 ALIGNMENT 0 YS2-6k11.q1k chrm 188 62 2719 2718 C 127 0.00 1372 reject_low 8 ALIGNMENT 23 YS2-6k11.q1k chrm 429 405 84193 84217 C 25 100.00 1372 reject_low 12 ALIGNMENT 32 YS2-6k11.q1k chrm 332 275 84214 84269 C 58 91.38 1372 reject_low 12 ALIGNMENT 20 YS2-6k11.q1k chrm 404 379 84213 84237 C 26 96.15 1372 reject_low 12 ALIGNMENT 34 YS2-6k11.q1k chrm 437 379 68604 68666 C 59 89.83 1372 reject_low 7 ALIGNMENT 0 YS2-6k11.q1k chrm 474 430 2553 2552 C 45 0.00 1372 reject_low 9 ALIGNMENT 21 YS2-6k11.q1k chrm 371 342 84187 84216 C 30 90.00 1372 reject_low 6 ALIGNMENT 0 YS2-6k11.q1k chrm 474 387 474 473 C 88 0.00 1372 reject_low 4 ALIGNMENT 23 YS2-6k11.q1k chrm 245 294 12326 12377 F 50 84.00 1372 reject_low 5 ALIGNMENT 0 YS2-6k11.q1k chrm 62 244 12326 12325 F 183 0.00 1372 reject_low 5 ALIGNMENT 0 YS2-6k11.q1k chrm 301 62 68674 68673 C 240 0.00 1372 reject_low 3 ALIGNMENT 0 YS2-6k11.q1k chrm 474 398 532 531 C 77 0.00 1372 reject_low 8 ALIGNMENT 64 YS2-6k11.q1k chrm 371 189 2546 2718 C 183 83.61 1372 reject_low 8 ALIGNMENT 0 YS2-6k11.q1k chrm 404 405 84218 84212 C 0 0.00 1372 reject_low 12 ALIGNMENT 59 YS2-6k11.q1k chrm 439 379 50716 50776 C 61 100.00 1372 reject_low 11 ALIGNMENT 0 YS2-6k11.q1k chrm 474 372 84188 84187 C 103 0.00 1372 reject_low 6 ALIGNMENT 0 YS2-6k11.q1k chrm 437 474 33818 33817 F 38 0.00 1372 reject_low 10 ALIGNMENT 22 YS2-6k11.q1k chrm 397 375 531 553 C 23 100.00 1372 reject_low 8 ALIGNMENT 0 YS2-6k11.q1k chrm 308 62 550 549 C 247 0.00 1372 reject_low 4 ALIGNMENT 0 YS2-6k11.p1k chr09 443 862 7244 7243 F 420 0.00 1424 reject_low 1 ALIGNMENT 27 YS2-6k11.q1k chrm 429 379 2552 2606 C 51 88.24 1372 reject_low 9 ALIGNMENT 0 YS2-6k11.q1k chrm 378 333 84238 84213 C 46 0.00 1372 reject_low 12 ALIGNMENT 0 YS2-6k11.p1k chr09 62 212 7015 7014 F 151 0.00 1424 reject_low 1 ALIGNMENT 0 YS2-6k11.p1k chr10 443 862 7227 7226 F 420 0.00 1424 reject_low 2 ALIGNMENT 0 YS2-6k11.p1k chr10 62 212 6998 6997 F 151 0.00 1424 reject_low 2 ALIGNMENT 0 YS2-6k11.q1k chrm 334 380 40411 40387 F 47 0.00 1372 reject_bad_break 0 ALIGNMENT 0 YS2-6k11.q1k chrm 374 372 554 2545 C 3 0.00 1372 reject_low 8 ALIGNMENT 0 YS2-6k11.q1k chrm 474 430 84194 84193 C 45 0.00 1372 reject_low 12 ALIGNMENT 0 YS2-6k11.q1k chrm 295 474 12377 12376 F 180 0.00 1372 reject_low 5 ALIGNMENT 0 YS2-6k11.q1k chrm 474 438 68605 68604 C 37 0.00 1372 reject_low 7 ALIGNMENT 20 YS2-6k11.q1k chrm 372 436 33757 33818 F 65 83.08 1372 reject_low 10 ALIGNMENT 187 YS2-6k11.p1k chr09 213 442 7015 7244 F 230 100.00 1424 reject_low 1 ALIGNMENT 0 YS2-6k11.q1k chrm 341 62 84217 84216 C 280 0.00 1372 reject_low 6 ALIGNMENT 187 YS2-6k11.p1k chr10 213 442 6998 7227 F 230 100.00 1424 reject_low 2 ALIGNMENT 0 YS2-6k11.q1k chrm 378 62 68667 68666 C 317 0.00 1372 reject_low 7 ALIGNMENT 176 YS2-6k11.q1k chrm 381 709 40388 40707 F 329 90.88 1372 reject_bad_break 0 ALIGNMENT 0 YS2-6k11.q1k chrm 378 62 2607 2606 C 317 0.00 1372 reject_low 9 ALIGNMENT 0 YS2-6k11.q1k chrm 62 371 33757 33756 F 310 0.00 1372 reject_low 10 ALIGNMENT 0 YS2-6k11.q1k chrm 474 360 68619 68618 C 115 0.00 1372 reject_low 3 ALIGNMENT 0 YS2-6k11.q1k chrm 474 440 50717 50716 C 35 0.00 1372 reject_low 11 ALIGNMENT 0 YS2-6k11.q1k chrm 378 333 50777 50751 C 46 0.00 1372 reject_low 11 ALIGNMENT 0 YS2-6k11.q1k chrm 274 62 84270 84269 C 213 0.00 1372 reject_low 12 ALIGNMENT 792 YS2-6k11.p1k chrm 1141 31 40400 41499 C 1111 95.68 1424 reject_bad_break 0 ALIGNMENT 41 YS2-6k11.q1k chrm 332 272 50752 50813 C 61 95.08 1372 reject_low 11 ALIGNMENT 0 YS2-6k12.q1k chr02 633 720 405955 405954 F 88 0.00 1282 reject_low 1 ALIGNMENT 0 YS2-6k12.q1k chr11 720 625 162489 162488 C 96 0.00 1282 reject_low 8 ALIGNMENT 73 YS2-6k12.q1k chr11 624 546 162488 162566 C 79 97.47 1282 reject_low 8 ALIGNMENT 0 YS2-6k12.q1k chr11 545 62 162567 162566 C 484 0.00 1282 reject_low 8 ALIGNMENT 72 YS2-6k12.q1k chr13 624 547 747887 747964 C 78 97.44 1282 reject_low 9 ALIGNMENT 0 YS2-6k12.q1k chr07 621 720 736416 736415 F 100 0.00 1282 reject_low 10 ALIGNMENT 948 YS2-6k12.p1k chr13 35 1108 127770 128859 F 1074 97.21 1350 accept 0 ALIGNMENT 0 YS2-6k12.q1k chr05 629 720 138745 138744 F 92 0.00 1282 reject_low 5 ALIGNMENT 0 YS2-6k12.q1k chr02 62 535 405858 405857 F 474 0.00 1282 reject_low 1 ALIGNMENT 0 YS2-6k12.q1k chr13 720 625 747888 747887 C 96 0.00 1282 reject_low 9 ALIGNMENT 72 YS2-6k12.q1k chr05 536 628 138653 138745 F 93 92.47 1282 reject_low 5 ALIGNMENT 76 YS2-6k12.q1k chr07 547 628 405471 405552 F 82 97.56 1282 reject_low 6 ALIGNMENT 0 YS2-6k12.q1k chr10 720 633 374411 374410 C 88 0.00 1282 reject_low 2 ALIGNMENT 0 YS2-6k12.q1k chr05 62 535 138653 138652 F 474 0.00 1282 reject_low 5 ALIGNMENT 0 YS2-6k12.q1k chr13 546 62 747965 747964 C 485 0.00 1282 reject_low 9 ALIGNMENT 0 YS2-6k12.q1k chr10 633 720 355373 355372 F 88 0.00 1282 reject_low 4 ALIGNMENT 0 YS2-6k12.q1k chr07 546 62 828802 828801 C 485 0.00 1282 reject_low 7 ALIGNMENT 71 YS2-6k12.q1k chr07 547 620 736343 736416 F 74 98.65 1282 reject_low 10 ALIGNMENT 82 YS2-6k12.q1k chr10 547 632 355288 355373 F 86 98.84 1282 reject_low 4 ALIGNMENT 0 YS2-6k12.q1k chr07 62 546 736343 736342 F 485 0.00 1282 reject_low 10 ALIGNMENT 82 YS2-6k12.q1k chr04 547 632 568877 568962 F 86 98.84 1282 reject_low 3 ALIGNMENT 0 YS2-6k12.q1k chr10 62 546 355288 355287 F 485 0.00 1282 reject_low 4 ALIGNMENT 752 YS2-6k12.q1k chr13 1033 31 131424 132414 C 1003 93.82 1282 accept 0 ALIGNMENT 84 YS2-6k12.q1k chr10 632 536 374410 374507 C 97 95.88 1282 reject_low 2 ALIGNMENT 0 YS2-6k12.q1k chr07 629 720 405552 405551 F 92 0.00 1282 reject_low 6 ALIGNMENT 76 YS2-6k12.q1k chr07 628 547 828720 828801 C 82 97.56 1282 reject_low 7 ALIGNMENT 0 YS2-6k12.q1k chr07 62 546 405471 405470 F 485 0.00 1282 reject_low 6 ALIGNMENT 0 YS2-6k12.q1k chr10 535 62 374508 374507 C 474 0.00 1282 reject_low 2 ALIGNMENT 0 YS2-6k12.q1k chr04 633 720 568962 568961 F 88 0.00 1282 reject_low 3 ALIGNMENT 84 YS2-6k12.q1k chr02 536 632 405858 405955 F 97 95.88 1282 reject_low 1 ALIGNMENT 0 YS2-6k12.q1k chr07 720 629 828721 828720 C 92 0.00 1282 reject_low 7 ALIGNMENT 0 YS2-6k12.q1k chr04 62 546 568877 568876 F 485 0.00 1282 reject_low 3 ALIGNMENT 653 YS2-6k14.q1k chr02 897 26 135839 136702 C 872 92.89 1384 accept 0 ALIGNMENT 974 YS2-6k14.p1k chr02 35 1137 131733 132842 F 1103 96.92 1266 accept 0 ALIGNMENT 38 YS2-6k15.q1k vc_7 624 661 13525 13562 F 38 100.00 1402 reject_low 17 ALIGNMENT 0 YS2-6k15.q1k vc_7 662 732 13562 13561 F 71 0.00 1402 reject_low 17 ALIGNMENT 39 YS2-6k15.q1k vc_5 661 623 5025 5063 C 39 100.00 1402 reject_low 15 ALIGNMENT 0 YS2-6k15.q1k vc_3 62 660 2531 2530 F 599 0.00 1402 reject_low 4 ALIGNMENT 42 YS2-6k15.q1k vc_1 661 620 2472 2513 C 42 100.00 1402 reject_low 12 ALIGNMENT 0 YS2-6k15.q1k vc_7 870 871 5172 6360 C 0 0.00 1402 reject_low 11 ALIGNMENT 245 YS2-6k15.q1k vc_3 661 1037 2531 2910 F 377 89.12 1402 reject_low 4 ALIGNMENT 0 YS2-6k15.q1k vc_4 660 62 1535 1534 C 599 0.00 1402 reject_low 10 ALIGNMENT 36 YS2-6k15.q1k vc_7 871 821 6360 6411 C 51 92.16 1402|1,0 reject_low 11 ALIGNMENT 529 YS2-6k15.p1k chr05 33 617 10823 11409 F 585 98.12 635 ambiguous_tel 0 ALIGNMENT 0 YS2-6k15.q1k vc_2 619 62 2147 2146 C 558 0.00 1402 reject_low 13 ALIGNMENT 42 YS2-6k15.q1k vc_4 620 661 5830 5871 F 42 100.00 1402 reject_low 9 ALIGNMENT 238 YS2-6k15.q1k vc_4 1037 661 5431 5812 C 377 88.86 1402 reject_low 7 ALIGNMENT 245 YS2-6k15.q1k vc_7 1037 661 2348 2727 C 377 89.39 1402 reject_low 6 ALIGNMENT 38 YS2-6k15.q1k vc_7 624 661 63 100 F 38 100.00 1402 reject_low 16 ALIGNMENT 0 YS2-6k15.q1k vc_4 660 62 5813 5812 C 599 0.00 1402 reject_low 7 ALIGNMENT 139 YS2-6k15.q1k vc_4 661 822 6353 6514 F 162 95.68 1402|1,0 reject_low 9 ALIGNMENT 0 YS2-6k15.q1k vc_5 622 62 5064 5063 C 561 0.00 1402 reject_low 15 ALIGNMENT 0 YS2-6k15.q1k vc_1 62 660 2531 2530 F 599 0.00 1402 reject_low 2 ALIGNMENT 245 YS2-6k15.q1k vc_5 661 1037 2398 2777 F 377 89.12 1402 reject_low 5 ALIGNMENT 0 YS2-6k15.q1k vc_4 62 619 5830 5829 F 558 0.00 1402 reject_low 9 ALIGNMENT 0 YS2-6k15.q1k vc_5 62 660 2398 2397 F 599 0.00 1402 reject_low 5 ALIGNMENT 0 YS2-6k15.q1k vc_4 662 661 5872 6353 F 0 0.00 1402 reject_low 9 ALIGNMENT 0 YS2-6k15.q1k vc_2 62 660 2164 2163 F 599 0.00 1402 reject_low 3 ALIGNMENT 245 YS2-6k15.q1k vc_1 661 1037 2531 2910 F 377 89.12 1402 reject_low 2 ALIGNMENT 0 YS2-6k15.q1k vc_1 619 62 2514 2513 C 558 0.00 1402 reject_low 12 ALIGNMENT 0 YS2-6k15.q1k vc_7 62 623 63 62 F 562 0.00 1402 reject_low 16 ALIGNMENT 70 YS2-6k15.q1k vc_7 1037 870 5003 5172 C 168 81.55 1402|0,1 reject_low 11 ALIGNMENT 0 YS2-6k15.q1k vc_5 622 62 37 36 C 561 0.00 1402 reject_low 18 ALIGNMENT 245 YS2-6k15.q1k vc_2 661 1037 2164 2543 F 377 89.12 1402 reject_low 3 ALIGNMENT 0 YS2-6k15.q1k vc_2 732 662 2106 2105 C 71 0.00 1402 reject_low 13 ALIGNMENT 0 YS2-6k15.q1k vc_7 660 62 2728 2727 C 599 0.00 1402 reject_low 6 ALIGNMENT 0 YS2-6k15.q1k vc_1 732 662 2473 2472 C 71 0.00 1402 reject_low 12 ALIGNMENT 0 YS2-6k15.q1k vc_7 662 732 100 99 F 71 0.00 1402 reject_low 16 ALIGNMENT 0 YS2-6k15.q1k vc_7 62 623 13525 13524 F 562 0.00 1402 reject_low 17 ALIGNMENT 139 YS2-6k15.q1k vc_4 661 822 126 287 F 162 95.68 1402 reject_low 8 ALIGNMENT 0 YS2-6k15.p1k chr05 618 635 11409 11408 F 18 0.00 635 ambiguous_tel 0 ALIGNMENT 42 YS2-6k15.q1k vc_2 661 620 2105 2146 C 42 100.00 1402 reject_low 13 ALIGNMENT 0 YS2-6k15.q1k vc_3 732 662 2473 2472 C 71 0.00 1402 reject_low 14 ALIGNMENT 42 YS2-6k15.q1k vc_3 661 620 2472 2513 C 42 100.00 1402 reject_low 14 ALIGNMENT 83 YS2-6k15.q1k vc_4 747 661 1448 1534 C 87 98.85 1402 reject_low 10 ALIGNMENT 0 YS2-6k15.q1k vc_5 732 659 2 1 C 74 0.00 1402 reject_low 18 ALIGNMENT 0 YS2-6k15.q1k vc_5 732 662 5026 5025 C 71 0.00 1402 reject_low 15 ALIGNMENT 0 YS2-6k15.q1k chr05 732 621 10824 10823 C 112 0.00 1402 ambiguous_tel 1 ALIGNMENT 0 YS2-6k15.q1k vc_3 619 62 2514 2513 C 558 0.00 1402 reject_low 14 ALIGNMENT 0 YS2-6k15.q1k vc_7 820 62 6412 6411 C 759 0.00 1402 reject_low 11 ALIGNMENT 0 YS2-6k15.q1k vc_4 62 660 126 125 F 599 0.00 1402 reject_low 8 ALIGNMENT 528 YS2-6k15.q1k chr05 620 34 10823 11409 C 587 97.79 1402 ambiguous_tel 1 ALIGNMENT 36 YS2-6k15.q1k vc_5 658 623 1 36 C 36 100.00 1402 reject_low 18 ALIGNMENT 960 YS2-6k16.p1k chr04 34 1135 175435 176548 F 1102 96.37 1372 accept 0 ALIGNMENT 772 YS2-6k16.q1k chr04 1018 30 177186 178173 C 989 93.53 1407 accept 0 ALIGNMENT 707 YS2-6k17.q1k chr04 951 36 1278129 1279044 C 916 92.79 1423 accept 0 ALIGNMENT 911 YS2-6k17.p1k chr04 33 1121 1276967 1278071 F 1089 95.96 1275 accept 0 ALIGNMENT 721 YS2-6k18.p1k chr14 31 773 325576 326318 F 743 99.87 774 accept_chi 0 ALIGNMENT 564 YS2-6k18.q1k chr14 702 4 325573 326268 C 699 94.56 1340 accept_chi 1 ALIGNMENT 559 YS2-6k19.p1k vc_3 778 1 971 1749 C 778 91.39 797 reject_vc 3 ALIGNMENT 559 YS2-6k19.p1k vc_1 778 1 971 1749 C 778 91.39 797 reject_vc 1 ALIGNMENT 553 YS2-6k19.p1k vc_6 1 733 3712 4443 F 733 92.63 797 reject_vc 5 ALIGNMENT 553 YS2-6k19.p1k vc_7 1 778 456 1234 F 778 91.13 797 reject_vc 4 ALIGNMENT 559 YS2-6k19.p1k vc_2 778 1 971 1749 C 778 91.39 797 reject_vc 2 ALIGNMENT 544 YS2-6k19.p1k vc_7 1 733 13918 14649 F 733 92.22 797 reject_vc 6 ALIGNMENT 562 YS2-6k19.p1k vc_5 778 1 3891 4669 C 778 91.52 797 reject_vc 0 ALIGNMENT 672 YS2-6k21.q1k chr02 36 966 151250 152168 F 931 92.48 1281 accept 0 ALIGNMENT 901 YS2-6k21.p1k chr02 1114 37 154739 155832 C 1078 96.94 1202 accept 0 ALIGNMENT 280 YS2-6k22.q1k vc_2 1 302 2322 2623 F 302 97.68 789 reject_vc 29 ALIGNMENT 0 YS2-6k22.p1k chr02 292 275 260049 260048 C 18 0.00 292 ambiguous_trans 3 ALIGNMENT 0 YS2-6k22.q1k vc_7 53 54 5172 6360 C 0 0.00 789 reject_vc 32 ALIGNMENT 0 YS2-6k22.p1k chr04 292 275 1207169 1207168 C 18 0.00 292 ambiguous_trans 8 ALIGNMENT 234 YS2-6k22.p1k chr04 274 32 1207168 1207411 C 243 99.59 292 ambiguous_trans 8 ALIGNMENT 148 YS2-6k22.q1k vc_4 311 661 1882 2227 F 351 83.19 789 reject_vc 31 ALIGNMENT 0 YS2-6k22.q1k vc_4 62 237 1548 1547 F 176 0.00 789 reject_vc 31 ALIGNMENT 0 YS2-6k22.p1k chr04 275 292 883741 883740 F 18 0.00 292 ambiguous_trans 5 ALIGNMENT 0 YS2-6k22.p1k chr07 275 292 822839 822838 F 18 0.00 292 ambiguous_trans 12 ALIGNMENT 0 YS2-6k22.p1k chr16 292 275 56930 56929 C 18 0.00 292 ambiguous_trans 22 ALIGNMENT 234 YS2-6k22.p1k chr16 274 32 844886 845129 C 243 99.59 292 ambiguous_trans 23 ALIGNMENT 0 YS2-6k22.q1k vc_4 237 62 6340 6339 C 176 0.00 789 reject_low 34 ALIGNMENT 234 YS2-6k22.p1k chr12 274 32 593621 593864 C 243 99.59 292 ambiguous_trans 16 ALIGNMENT 280 YS2-6k22.q1k vc_3 1 302 2689 2990 F 302 97.68 789 reject_vc 30 ALIGNMENT 0 YS2-6k22.p1k chr15 292 275 118181 118180 C 18 0.00 292 ambiguous_trans 20 ALIGNMENT 0 YS2-6k22.p1k chr15 292 275 595294 595293 C 18 0.00 292 ambiguous_trans 21 ALIGNMENT 0 YS2-6k22.p1k chr04 292 275 1096241 1096240 C 18 0.00 292 ambiguous_trans 7 ALIGNMENT 210 YS2-6k22.p1k chr16 32 274 809841 810084 F 243 96.71 292 ambiguous_trans 27 ALIGNMENT 0 YS2-6k22.p1k chr16 275 292 810084 810083 F 18 0.00 292 ambiguous_trans 27 ALIGNMENT 234 YS2-6k22.p1k chr15 274 32 118180 118423 C 243 99.59 292 ambiguous_trans 20 ALIGNMENT 234 YS2-6k22.p1k chr13 274 32 196809 197052 C 243 99.59 292 ambiguous_trans 18 ALIGNMENT 0 YS2-6k22.p1k chr13 292 275 184643 184642 C 18 0.00 292 ambiguous_trans 25 ALIGNMENT 0 YS2-6k22.p1k chr16 275 292 856072 856071 F 18 0.00 292 ambiguous_trans 24 ALIGNMENT 234 YS2-6k22.p1k chr16 274 32 56929 57172 C 243 99.59 292 ambiguous_trans 22 ALIGNMENT 434 YS2-6k22.q1k vc_7 661 1 1914 2569 C 661 89.56 789 reject_vc 1 ALIGNMENT 234 YS2-6k22.p1k chr04 32 274 883498 883741 F 243 99.59 292 ambiguous_trans 5 ALIGNMENT 234 YS2-6k22.p1k chr04 32 274 991919 992162 F 243 99.59 292 ambiguous_trans 6 ALIGNMENT 87 YS2-6k22.q1k vc_7 422 305 4583 4699 C 118 92.37 789 reject_vc 32 ALIGNMENT 57 YS2-6k22.q1k vc_4 302 238 48 112 C 65 96.92 789 reject_low 33 ALIGNMENT 234 YS2-6k22.p1k chr12 32 274 220285 220528 F 243 99.59 292 ambiguous_trans_ua 14 ALIGNMENT 0 YS2-6k22.p1k chr12 275 292 481421 481420 F 18 0.00 292 ambiguous_trans 15 ALIGNMENT 0 YS2-6k22.q1k vc_7 304 303 4700 4922 C 2 0.00 789 reject_vc 32 ALIGNMENT 234 YS2-6k22.p1k chr04 274 32 1096240 1096483 C 243 99.59 292 ambiguous_trans 7 ALIGNMENT 0 YS2-6k22.p1k chr10 292 275 472856 472855 C 18 0.00 292 ambiguous_trans 13 ALIGNMENT 0 YS2-6k22.q1k vc_4 237 62 113 112 C 176 0.00 789 reject_low 33 ALIGNMENT 0 YS2-6k22.p1k chr12 292 275 651301 651300 C 18 0.00 292 ambiguous_trans 17 ALIGNMENT 234 YS2-6k22.p1k chr12 274 32 651300 651543 C 243 99.59 292 ambiguous_trans 17 ALIGNMENT 0 YS2-6k22.p1k chr10 292 275 478440 478439 C 18 0.00 292 ambiguous_trans 26 ALIGNMENT 0 YS2-6k22.p1k chr13 292 275 196810 196809 C 18 0.00 292 ambiguous_trans 18 ALIGNMENT 0 YS2-6k22.p1k chr16 292 275 844887 844886 C 18 0.00 292 ambiguous_trans 23 ALIGNMENT 0 YS2-6k22.p1k chr05 275 292 448839 448838 F 18 0.00 292 ambiguous_trans 9 ALIGNMENT 51 YS2-6k22.q1k vc_7 54 3 6360 6411 C 52 100.00 789|1,0 reject_vc 32 ALIGNMENT 0 YS2-6k22.p1k chr12 292 275 593622 593621 C 18 0.00 292 ambiguous_trans 16 ALIGNMENT 234 YS2-6k22.p1k chr12 32 274 481178 481421 F 243 99.59 292 ambiguous_trans 15 ALIGNMENT 210 YS2-6k22.p1k chr10 274 32 478439 478682 C 243 96.71 292 ambiguous_trans 26 ALIGNMENT 234 YS2-6k22.p1k chr07 32 274 567047 567290 F 243 99.59 292 ambiguous_trans 11 ALIGNMENT 234 YS2-6k22.p1k chr02 274 32 260048 260291 C 243 99.59 292 ambiguous_trans 3 ALIGNMENT 234 YS2-6k22.p1k chr05 32 274 448596 448839 F 243 99.59 292 ambiguous_trans 9 ALIGNMENT 231 YS2-6k22.p1k chr13 274 32 184642 184885 C 243 99.18 292 ambiguous_trans 25 ALIGNMENT 234 YS2-6k22.p1k chr05 32 274 497695 497938 F 243 99.59 292 ambiguous_trans 10 ALIGNMENT 57 YS2-6k22.q1k vc_4 302 238 6275 6339 C 65 96.92 789 reject_low 34 ALIGNMENT 434 YS2-6k22.q1k vc_5 1 661 2556 3211 F 661 89.71 789 reject_vc 0 ALIGNMENT 0 YS2-6k22.p1k chr13 275 292 378143 378142 F 18 0.00 292 ambiguous_trans 19 ALIGNMENT 234 YS2-6k22.p1k chr10 274 32 472855 473098 C 243 99.59 292 ambiguous_trans 13 ALIGNMENT 234 YS2-6k22.p1k chr07 32 274 822596 822839 F 243 99.59 292 ambiguous_trans 12 ALIGNMENT 234 YS2-6k22.p1k chr15 274 32 595293 595536 C 243 99.59 292 ambiguous_trans 21 ALIGNMENT 280 YS2-6k22.q1k vc_1 1 302 2689 2990 F 302 97.68 789 reject_vc 28 ALIGNMENT 0 YS2-6k22.p1k chr04 275 292 992162 992161 F 18 0.00 292 ambiguous_trans 6 ALIGNMENT 0 YS2-6k22.p1k chr05 275 292 497938 497937 F 18 0.00 292 ambiguous_trans 10 ALIGNMENT 234 YS2-6k22.p1k chr16 32 274 855829 856072 F 243 99.59 292 ambiguous_trans 24 ALIGNMENT 234 YS2-6k22.p1k chr13 32 274 377900 378143 F 243 99.59 292 ambiguous_trans 19 ALIGNMENT 361 YS2-6k22.q1k vc_4 422 1 5232 5654 C 422 95.50 789 reject_vc 2 ALIGNMENT 0 YS2-6k22.p1k chr12 275 292 220528 220527 F 18 0.00 292 ambiguous_trans_ua 14 ALIGNMENT 0 YS2-6k22.q1k vc_4 303 310 1613 1881 F 8 0.00 789 reject_vc 31 ALIGNMENT 0 YS2-6k22.p1k chr04 275 292 650940 650939 F 18 0.00 292 ambiguous_trans 4 ALIGNMENT 0 YS2-6k22.p1k chr07 275 292 567290 567289 F 18 0.00 292 ambiguous_trans 11 ALIGNMENT 226 YS2-6k22.q1k vc_7 302 53 4923 5172 C 250 96.80 789|0,1 reject_vc 32 ALIGNMENT 57 YS2-6k22.q1k vc_4 238 302 1548 1612 F 65 96.92 789 reject_vc 31 ALIGNMENT 234 YS2-6k22.p1k chr04 32 274 650697 650940 F 243 99.59 292 ambiguous_trans 4 ALIGNMENT 52 YS2-6k23.q1k chr12 214 77 818211 818349 C 138 82.61 1190 reject_low 5 ALIGNMENT 48 YS2-6k23.q1k chr13 214 77 357142 357281 C 138 81.88 1190 reject_low 12 ALIGNMENT 0 YS2-6k23.q1k chr02 215 585 265354 265353 F 371 0.00 1190 reject_low 8 ALIGNMENT 0 YS2-6k23.q1k chr14 585 215 96749 96748 C 371 0.00 1190 reject_low 15 ALIGNMENT 48 YS2-6k23.q1k chr02 77 214 221094 221233 F 138 81.88 1190 reject_low 6 ALIGNMENT 36 YS2-6k23.q1k chr10 193 77 354610 354728 C 117 80.34 1190 reject_low 19 ALIGNMENT 45 YS2-6k23.q1k chr08 214 77 543748 543887 C 138 81.16 1190 reject_low 14 ALIGNMENT 0 YS2-6k23.q1k chr16 167 128 436431 436483 C 40 0.00 1190 reject_low 21 ALIGNMENT 0 YS2-6k23.q1k chr09 585 194 197315 197314 C 392 0.00 1190 reject_low 20 ALIGNMENT 0 YS2-6k23.q1k chr13 585 211 378871 378870 C 375 0.00 1190 reject_low 3 ALIGNMENT 42 YS2-6k23.q1k chr07 77 214 931745 931884 F 138 80.43 1190 reject_low 18 ALIGNMENT 26 YS2-6k23.q1k chr16 214 168 436384 436430 C 47 91.49 1190 reject_low 21 ALIGNMENT 0 YS2-6k23.q1k chr11 585 215 513312 513311 C 371 0.00 1190 reject_low 1 ALIGNMENT 36 YS2-6k23.q1k chr16 127 68 436484 436543 C 60 88.33 1190 reject_low 21 ALIGNMENT 45 YS2-6k23.q1k chr02 77 214 259630 259769 F 138 81.16 1190 reject_low 13 ALIGNMENT 45 YS2-6k23.q1k chr14 214 77 96748 96887 C 138 81.16 1190 reject_low 15 ALIGNMENT 0 YS2-6k23.q1k chr12 585 215 818212 818211 C 371 0.00 1190 reject_low 5 ALIGNMENT 0 YS2-6k23.q1k chr02 215 585 221233 221232 F 371 0.00 1190 reject_low 6 ALIGNMENT 0 YS2-6k23.q1k chr07 585 215 823119 823118 C 371 0.00 1190 reject_low 10 ALIGNMENT 0 YS2-6k23.q1k chr13 585 215 357143 357142 C 371 0.00 1190 reject_low 12 ALIGNMENT 973 YS2-6k23.p1k chr06 1227 34 262140 263336 C 1194 95.14 1251 accept 0 ALIGNMENT 0 YS2-6k23.q1k chr02 215 585 259769 259768 F 371 0.00 1190 reject_low 13 ALIGNMENT 0 YS2-6k23.q1k chr11 585 215 457922 457921 C 371 0.00 1190 reject_low 11 ALIGNMENT 57 YS2-6k23.q1k chr15 214 72 664133 664276 C 143 83.22 1190 reject_low 4 ALIGNMENT 0 YS2-6k23.q1k chr02 585 141 258861 258860 C 445 0.00 1190 reject_low 17 ALIGNMENT 0 YS2-6k23.q1k chr10 585 194 354611 354610 C 392 0.00 1190 reject_low 19 ALIGNMENT 0 YS2-6k23.q1k chr08 585 215 543749 543748 C 371 0.00 1190 reject_low 14 ALIGNMENT 48 YS2-6k23.q1k chr07 214 77 817536 817675 C 138 81.88 1190 reject_low 9 ALIGNMENT 65 YS2-6k23.q1k chr11 214 44 513311 513482 C 171 83.04 1190 reject_low 1 ALIGNMENT 0 YS2-6k23.q1k chr09 136 92 197372 197371 C 45 0.00 1190 reject_low 20 ALIGNMENT 0 YS2-6k23.q1k chr07 215 585 931884 931883 F 371 0.00 1190 reject_low 18 ALIGNMENT 0 YS2-6k23.q1k chr07 585 215 817537 817536 C 371 0.00 1190 reject_low 9 ALIGNMENT 57 YS2-6k23.q1k chr13 210 44 378870 379038 C 167 80.84 1190 reject_low 3 ALIGNMENT 48 YS2-6k23.q1k chr02 77 214 226678 226817 F 138 81.88 1190 reject_low 7 ALIGNMENT 57 YS2-6k23.q1k chr13 175 44 481392 481525 C 132 83.33 1190 reject_low 2 ALIGNMENT 0 YS2-6k23.q1k chr15 585 215 664134 664133 C 371 0.00 1190 reject_low 4 ALIGNMENT 0 YS2-6k23.q1k chr03 585 214 124271 124270 C 372 0.00 1190 reject_low 16 ALIGNMENT 728 YS2-6k23.q1k chr06 30 947 261288 262205 F 918 95.10 1190 accept 0 ALIGNMENT 48 YS2-6k23.q1k chr11 214 77 457921 458060 C 138 81.88 1190 reject_low 11 ALIGNMENT 32 YS2-6k23.q1k chr09 193 137 197314 197371 C 57 89.47 1190 reject_low 20 ALIGNMENT 44 YS2-6k23.q1k chr03 213 77 124270 124408 C 137 81.02 1190 reject_low 16 ALIGNMENT 27 YS2-6k23.q1k chr02 140 40 258860 258958 C 101 79.21 1190 reject_low 17 ALIGNMENT 0 YS2-6k23.q1k chr16 585 215 436385 436384 C 371 0.00 1190 reject_low 21 ALIGNMENT 48 YS2-6k23.q1k chr02 77 214 265215 265354 F 138 81.88 1190 reject_low 8 ALIGNMENT 48 YS2-6k23.q1k chr07 214 77 823118 823257 C 138 81.88 1190 reject_low 10 ALIGNMENT 0 YS2-6k23.q1k chr13 585 176 481393 481392 C 410 0.00 1190 reject_low 2 ALIGNMENT 0 YS2-6k23.q1k chr02 215 585 226817 226816 F 371 0.00 1190 reject_low 7 ALIGNMENT 544 YS2-6k24.q1k chr06 54 869 261291 262091 F 816 91.54 1373 accept 0 ALIGNMENT 0 YS2-6k24.q1k chr08 553 243 549445 549444 C 311 0.00 1373 reject_low 14 ALIGNMENT 50 YS2-6k24.q1k chr11 242 105 457921 458060 C 138 82.61 1373 reject_low 7 ALIGNMENT 36 YS2-6k24.q1k chr16 155 96 436484 436543 C 60 88.33 1373 reject_low 20 ALIGNMENT 50 YS2-6k24.q1k chr07 242 105 817536 817675 C 138 82.61 1373 reject_low 6 ALIGNMENT 0 YS2-6k24.q1k chr07 243 553 535408 535407 F 311 0.00 1373 reject_low 5 ALIGNMENT 0 YS2-6k24.q1k chr10 553 222 354611 354610 C 332 0.00 1373 reject_low 17 ALIGNMENT 50 YS2-6k24.q1k chr11 242 105 517233 517372 C 138 82.61 1373 reject_low 8 ALIGNMENT 47 YS2-6k24.q1k chr03 241 105 124270 124408 C 137 81.75 1373 reject_low 15 ALIGNMENT 35 YS2-6k24.q1k chr09 221 165 197314 197371 C 57 91.23 1373 reject_low 18 ALIGNMENT 0 YS2-6k24.q1k chr13 553 243 357143 357142 C 311 0.00 1373 reject_low 9 ALIGNMENT 44 YS2-6k24.q1k chr07 105 242 931745 931884 F 138 81.16 1373 reject_low 16 ALIGNMENT 0 YS2-6k24.q1k chr16 195 156 436431 436483 C 40 0.00 1373 reject_low 20 ALIGNMENT 0 YS2-6k24.q1k chr15 553 243 664134 664133 C 311 0.00 1373 reject_low 2 ALIGNMENT 0 YS2-6k24.q1k chr02 553 169 258861 258860 C 385 0.00 1373 reject_low 19 ALIGNMENT 0 YS2-6k24.q1k chr13 553 243 362725 362724 C 311 0.00 1373 reject_low 10 ALIGNMENT 0 YS2-6k24.q1k chr07 553 243 817537 817536 C 311 0.00 1373 reject_low 6 ALIGNMENT 47 YS2-6k24.q1k chr02 105 242 259630 259769 F 138 81.88 1373 reject_low 12 ALIGNMENT 50 YS2-6k24.q1k chr13 242 105 362724 362863 C 138 82.61 1373 reject_low 10 ALIGNMENT 50 YS2-6k24.q1k chr02 105 242 226678 226817 F 138 82.61 1373 reject_low 4 ALIGNMENT 0 YS2-6k24.q1k chr09 164 122 197372 197371 C 43 0.00 1373 reject_low 18 ALIGNMENT 932 YS2-6k24.p1k chr06 1242 71 262125 263295 C 1172 94.54 1261 accept 0 ALIGNMENT 27 YS2-6k24.q1k chr02 168 107 258860 258921 C 62 83.87 1373 reject_low 19 ALIGNMENT 0 YS2-6k24.q1k chr11 553 243 517234 517233 C 311 0.00 1373 reject_low 8 ALIGNMENT 50 YS2-6k24.q1k chr13 242 105 357142 357281 C 138 82.61 1373 reject_low 9 ALIGNMENT 50 YS2-6k24.q1k chr04 107 242 1151087 1151223 F 136 82.35 1373 reject_low 11 ALIGNMENT 0 YS2-6k24.q1k chr16 553 243 436385 436384 C 311 0.00 1373 reject_low 20 ALIGNMENT 0 YS2-6k24.q1k chr03 553 242 124271 124270 C 312 0.00 1373 reject_low 15 ALIGNMENT 0 YS2-6k24.q1k chr11 553 243 457922 457921 C 311 0.00 1373 reject_low 7 ALIGNMENT 0 YS2-6k24.q1k chr07 243 553 931884 931883 F 311 0.00 1373 reject_low 16 ALIGNMENT 56 YS2-6k24.q1k chr15 242 100 664133 664276 C 143 83.22 1373 reject_low 2 ALIGNMENT 50 YS2-6k24.q1k chr13 203 67 481392 481526 C 137 82.48 1373 reject_low 1 ALIGNMENT 0 YS2-6k24.q1k chr13 553 204 481393 481392 C 350 0.00 1373 reject_low 1 ALIGNMENT 47 YS2-6k24.q1k chr08 242 105 543748 543887 C 138 81.88 1373 reject_low 13 ALIGNMENT 0 YS2-6k24.q1k chr02 243 553 259769 259768 F 311 0.00 1373 reject_low 12 ALIGNMENT 0 YS2-6k24.q1k chr02 243 553 221233 221232 F 311 0.00 1373 reject_low 3 ALIGNMENT 0 YS2-6k24.q1k chr08 553 243 543749 543748 C 311 0.00 1373 reject_low 13 ALIGNMENT 0 YS2-6k24.q1k chr09 553 222 197315 197314 C 332 0.00 1373 reject_low 18 ALIGNMENT 50 YS2-6k24.q1k chr07 105 242 535269 535408 F 138 82.61 1373 reject_low 5 ALIGNMENT 0 YS2-6k24.q1k chr02 243 553 226817 226816 F 311 0.00 1373 reject_low 4 ALIGNMENT 39 YS2-6k24.q1k chr10 221 105 354610 354728 C 117 81.20 1373 reject_low 17 ALIGNMENT 47 YS2-6k24.q1k chr08 242 105 549444 549583 C 138 81.88 1373 reject_low 14 ALIGNMENT 0 YS2-6k24.q1k chr04 243 553 1151223 1151222 F 311 0.00 1373 reject_low 11 ALIGNMENT 26 YS2-6k24.q1k chr16 242 196 436384 436430 C 47 91.49 1373 reject_low 20 ALIGNMENT 50 YS2-6k24.q1k chr02 105 242 221094 221233 F 138 82.61 1373 reject_low 3 ALIGNMENT 727 YS2-6l01.q1k chr15 38 937 803048 803941 F 900 94.89 1380 accept 0 ALIGNMENT 941 YS2-6l01.p1k chr15 1224 30 803436 804640 C 1195 94.73 1312 accept 0 ALIGNMENT 348 YS2-6l02.q1k vc_5 1 527 2556 3082 F 527 88.99 976 reject_vc 0 ALIGNMENT 0 YS2-6l02.q1k vc_7 304 304 4700 4921 C 1 0.00 976 reject_low 6 ALIGNMENT 0 YS2-6l02.q1k vc_4 305 307 1615 1878 F 3 0.00 976 reject_low 7 ALIGNMENT 217 YS2-6l02.q1k vc_7 303 53 4922 5172 C 251 95.62 976|0,1 reject_low 6 ALIGNMENT 42 YS2-6l02.q1k vc_4 304 238 46 112 C 67 88.06 976 reject_low 8 ALIGNMENT 72 YS2-6l02.q1k vc_4 308 527 1879 2098 F 220 78.18 976 reject_low 7 ALIGNMENT 348 YS2-6l02.q1k vc_7 527 1 2043 2569 C 527 88.99 976 reject_vc 1 ALIGNMENT 42 YS2-6l02.q1k vc_4 304 238 6273 6339 C 67 88.06 976 reject_low 9 ALIGNMENT 55 YS2-6l02.q1k vc_7 408 305 4595 4699 C 104 84.62 976 reject_low 6 ALIGNMENT 0 YS2-6l02.q1k vc_4 237 62 6340 6339 C 176 0.00 976 reject_low 9 ALIGNMENT 51 YS2-6l02.q1k vc_7 54 3 6360 6411 C 52 100.00 976|1,0 reject_low 6 ALIGNMENT 272 YS2-6l02.q1k vc_2 1 303 2322 2624 F 303 96.70 976 reject_low 4 ALIGNMENT 0 YS2-6l02.q1k vc_7 53 54 5172 6360 C 0 0.00 976 reject_low 6 ALIGNMENT 272 YS2-6l02.q1k vc_1 1 303 2689 2991 F 303 96.70 976 reject_low 3 ALIGNMENT 272 YS2-6l02.q1k vc_3 1 303 2689 2991 F 303 96.70 976 reject_low 5 ALIGNMENT 0 YS2-6l02.q1k vc_4 237 62 113 112 C 176 0.00 976 reject_low 8 ALIGNMENT 321 YS2-6l02.q1k vc_4 408 1 5244 5654 C 408 93.14 976 reject_low 2 ALIGNMENT 42 YS2-6l02.q1k vc_4 238 304 1548 1614 F 67 88.06 976 reject_low 7 ALIGNMENT 0 YS2-6l02.q1k vc_4 62 237 1548 1547 F 176 0.00 976 reject_low 7 ALIGNMENT 0 YS2-6l03.p1k chr13 134 62 238378 238377 C 73 0.00 252 reject_low 1 ALIGNMENT 132 YS2-6l03.p1k chr09 37 233 51555 51745 F 197 95.43 252 accept 0 ALIGNMENT 0 YS2-6l03.p1k chr09 234 252 51745 51744 F 19 0.00 252 accept 0 ALIGNMENT 21 YS2-6l03.p1k chr13 184 135 238328 238377 C 50 90.00 252 reject_low 1 ALIGNMENT 0 YS2-6l03.p1k chr13 252 185 238329 238328 C 68 0.00 252 reject_low 1 ALIGNMENT 949 YS2-6l04.p1k chr12 1178 68 453975 455100 C 1111 95.95 1361 accept 0 ALIGNMENT 447 YS2-6l04.q1k chr12 44 642 453116 453710 F 599 92.15 1355 accept 0 ALIGNMENT 949 YS2-6l04.p1k chr12 1178 68 463112 464237 C 1111 95.95 1361 accept 1 ALIGNMENT 447 YS2-6l04.q1k chr12 44 642 462253 462847 F 599 92.15 1355 accept 1 ALIGNMENT 928 YS2-6l06.p1k chr04 1107 31 1033206 1034289 C 1077 97.77 1351 accept 0 ALIGNMENT 693 YS2-6l06.q1k chr04 33 911 1031338 1032209 F 879 94.54 1364 accept 0 ALIGNMENT 804 YS2-6l07.q1k scplasm1 27 1000 4611 5580 F 974 95.17 1351 accept_chi 0 ALIGNMENT 208 YS2-6l07.p1k scplasm1 1095 676 2531 2955 C 420 83.57 1341 reject_bad_break 1 ALIGNMENT 121 YS2-6l07.p1k scplasm1 632 43 3188 3783 C 590 75.93 1341 reject_bad_break 1 ALIGNMENT 47 YS2-6l07.p1k scplasm1 43 109 870 936 F 67 92.54 1341 reject_low 2 ALIGNMENT 0 YS2-6l07.p1k scplasm1 675 633 2956 3187 C 43 0.00 1341 reject_bad_break 1 ALIGNMENT 0 YS2-6l07.p1k scplasm1 110 838 936 935 F 729 0.00 1341 reject_low 2 ALIGNMENT 433 YS2-6l08.p1k chr04 741 93 1033588 1034235 C 649 88.91 1367 accept 0 ALIGNMENT 0 YS2-6l09.q1k vc_2 517 62 2143 2142 C 456 0.00 1320 reject_low 3 ALIGNMENT 0 YS2-6l09.q1k vc_2 62 554 2164 2163 F 493 0.00 1320 reject_low 2 ALIGNMENT 29 YS2-6l09.q1k vc_2 555 518 2105 2142 C 38 92.11 1320 reject_low 3 ALIGNMENT 89 YS2-6l09.q1k vc_2 555 774 2164 2376 F 220 82.73 1320 reject_low 2 ALIGNMENT 0 YS2-6l09.p1k chr03 566 584 44379 44378 F 19 0.00 584 accept_chi 0 ALIGNMENT 477 YS2-6l09.q1k chr03 514 1 43853 44367 C 514 98.25 1320 accept_chi 1 ALIGNMENT 513 YS2-6l09.p1k chr03 39 565 43853 44379 F 527 99.62 584 accept_chi 0 ALIGNMENT 619 YS2-6l10.q1k chr04 795 8 719242 720022 C 788 94.42 1542 accept 0 ALIGNMENT 892 YS2-6l10.p1k chr04 29 1083 715428 716489 F 1055 95.92 1282 accept 0 ALIGNMENT 24 YS2-6l11.p1k vc_3 843 815 2443 2472 C 29 96.55 1388 reject_low 21 ALIGNMENT 66 YS2-6l11.q1k vc_4 834 990 6353 6503 F 157 84.08 1293 reject_low 14 ALIGNMENT 208 YS2-6l11.p1k vc_5 1221 815 4610 5025 C 407 86.00 1388 reject_low 4 ALIGNMENT 0 YS2-6l11.p1k vc_5 814 62 5026 5025 C 753 0.00 1388 reject_low 4 ALIGNMENT 0 YS2-6l11.q1k vc_4 833 62 1535 1534 C 772 0.00 1293 reject_low 15 ALIGNMENT 32 YS2-6l11.q1k vc_1 832 795 2474 2511 C 38 94.74 1293 reject_low 16 ALIGNMENT 0 YS2-6l11.p1k vc_4 62 814 5871 5870 F 753 0.00 1388 reject_low 9 ALIGNMENT 66 YS2-6l11.q1k vc_7 1024 834 2546 2727 C 191 82.20 1293 reject_low 3 ALIGNMENT 209 YS2-6l11.p1k vc_7 815 1221 13562 13977 F 407 86.00 1388 reject_low 5 ALIGNMENT 24 YS2-6l11.p1k vc_1 843 815 2443 2472 C 29 96.55 1388 reject_low 20 ALIGNMENT 208 YS2-6l11.p1k vc_1 1221 815 1690 2105 C 407 86.00 1388 reject_low 6 ALIGNMENT 0 YS2-6l11.p1k vc_1 814 62 2473 2472 C 753 0.00 1388 reject_low 20 ALIGNMENT 31 YS2-6l11.q1k vc_5 832 796 5027 5063 C 37 94.59 1293 reject_low 18 ALIGNMENT 208 YS2-6l11.p1k vc_2 1221 815 1690 2105 C 407 86.00 1388 reject_low 7 ALIGNMENT 66 YS2-6l11.q1k vc_4 834 990 126 276 F 157 84.08 1293 reject_low 13 ALIGNMENT 0 YS2-6l11.q1k vc_5 795 62 37 36 C 734 0.00 1293 reject_low 19 ALIGNMENT 0 YS2-6l11.q1k vc_5 62 833 2398 2397 F 772 0.00 1293 reject_low 4 ALIGNMENT 0 YS2-6l11.q1k vc_3 794 62 2512 2511 C 733 0.00 1293 reject_low 17 ALIGNMENT 208 YS2-6l11.p1k vc_3 1221 815 1690 2105 C 407 86.00 1388 reject_low 8 ALIGNMENT 0 YS2-6l11.p1k vc_7 62 814 13562 13561 F 753 0.00 1388 reject_low 5 ALIGNMENT 0 YS2-6l11.q1k vc_7 833 62 2728 2727 C 772 0.00 1293 reject_low 3 ALIGNMENT 66 YS2-6l11.q1k vc_5 834 1024 2398 2579 F 191 82.20 1293 reject_low 4 ALIGNMENT 0 YS2-6l11.q1k vc_5 795 62 5064 5063 C 734 0.00 1293 reject_low 18 ALIGNMENT 209 YS2-6l11.p1k vc_7 815 1221 100 515 F 407 86.00 1388 reject_low 3 ALIGNMENT 0 YS2-6l11.q1k vc_4 833 833 5870 6352 F 1 0.00 1293 reject_low 14 ALIGNMENT 0 YS2-6l11.p1k vc_2 814 62 2106 2105 C 753 0.00 1388 reject_low 7 ALIGNMENT 52 YS2-6l11.q1k vc_4 922 834 1446 1534 C 89 87.64 1293 reject_low 15 ALIGNMENT 0 YS2-6l11.q1k vc_4 62 794 5832 5831 F 733 0.00 1293 reject_low 14 ALIGNMENT 736 YS2-6l11.q1k chr12 26 791 466464 467229 F 766 99.22 1293 reject_low 2 ALIGNMENT 736 YS2-6l11.q1k chr12 26 791 457327 458092 F 766 99.22 1293 accept 0 ALIGNMENT 0 YS2-6l11.p1k vc_1 814 62 2106 2105 C 753 0.00 1388 reject_low 6 ALIGNMENT 32 YS2-6l11.q1k vc_3 832 795 2474 2511 C 38 94.74 1293 reject_low 17 ALIGNMENT 0 YS2-6l11.q1k vc_3 62 833 2531 2530 F 772 0.00 1293 reject_low 11 ALIGNMENT 751 YS2-6l11.p1k chr12 797 31 466464 467231 C 767 99.87 1388 accept 0 ALIGNMENT 66 YS2-6l11.q1k vc_3 834 1024 2531 2712 F 191 82.20 1293 reject_low 11 ALIGNMENT 0 YS2-6l11.p1k vc_3 814 62 2106 2105 C 753 0.00 1388 reject_low 8 ALIGNMENT 0 YS2-6l11.p1k chr12 855 798 457328 457327 C 58 0.00 1388 reject_low 1 ALIGNMENT 0 YS2-6l11.q1k vc_4 62 833 126 125 F 772 0.00 1293 reject_low 13 ALIGNMENT 0 YS2-6l11.q1k vc_1 62 833 2531 2530 F 772 0.00 1293 reject_low 10 ALIGNMENT 0 YS2-6l11.p1k chr12 855 798 466465 466464 C 58 0.00 1388 accept 0 ALIGNMENT 751 YS2-6l11.p1k chr12 797 31 457327 458094 C 767 99.87 1388 reject_low 1 ALIGNMENT 0 YS2-6l11.q1k vc_1 794 62 2512 2511 C 733 0.00 1293 reject_low 16 ALIGNMENT 66 YS2-6l11.q1k vc_4 1024 834 5631 5812 C 191 82.20 1293 reject_low 12 ALIGNMENT 205 YS2-6l11.p1k vc_4 815 1141 5871 6193 F 327 88.69 1388 reject_low 9 ALIGNMENT 66 YS2-6l11.q1k vc_1 834 1024 2531 2712 F 191 82.20 1293 reject_low 10 ALIGNMENT 30 YS2-6l11.q1k vc_5 831 796 1 36 C 36 94.44 1293 reject_low 19 ALIGNMENT 0 YS2-6l11.q1k vc_4 833 62 5813 5812 C 772 0.00 1293 reject_low 12 ALIGNMENT 32 YS2-6l11.q1k vc_4 795 832 5832 5869 F 38 94.74 1293 reject_low 14 ALIGNMENT 0 YS2-6l11.p1k vc_7 62 814 100 99 F 753 0.00 1388 reject_low 3 ALIGNMENT 0 YS2-6l11.p1k vc_3 814 62 2473 2472 C 753 0.00 1388 reject_low 21 ALIGNMENT 253 YS2-6l12.q1k chr12 900 549 490195 490543 C 352 91.19 1368 reject_low 3 ALIGNMENT 825 YS2-6l12.p1k chr12 34 933 457800 458687 F 900 98.33 1353 reject_bad_break 0 ALIGNMENT 55 YS2-6l12.p1k chr12 991 1132 458715 458871 F 142 86.62 1353 reject_bad_break 0 ALIGNMENT 55 YS2-6l12.p1k chr12 991 1132 467852 468008 F 142 86.62 1353 reject_low 1 ALIGNMENT 0 YS2-6l12.p1k chr12 934 990 467825 467851 F 57 0.00 1353 reject_low 1 ALIGNMENT 761 YS2-6l12.q1k chr12 900 32 461364 462229 C 869 96.20 1368 reject_bad_break 0 ALIGNMENT 0 YS2-6l12.q1k chr12 548 62 490544 490543 C 487 0.00 1368 reject_low 3 ALIGNMENT 0 YS2-6l12.p1k chr12 934 990 458688 458714 F 57 0.00 1353 reject_bad_break 0 ALIGNMENT 825 YS2-6l12.p1k chr12 34 933 466937 467824 F 900 98.33 1353 reject_low 1 ALIGNMENT 761 YS2-6l12.q1k chr12 900 32 452227 453092 C 869 96.20 1368 reject_low 2 ALIGNMENT 718 YS2-6l13.q1k chr05 983 24 436555 437519 C 960 93.02 1342 accept 0 ALIGNMENT 0 YS2-6l13.p1k chr10 62 170 474934 474933 F 109 0.00 1297 ambiguous_trans 27 ALIGNMENT 923 YS2-6l13.p1k chr04 38 1143 983570 984684 F 1106 95.66 1297 ambiguous_trans 5 ALIGNMENT 204 YS2-6l13.p1k chr16 746 40 853418 854125 C 707 77.51 1297 ambiguous_trans 22 ALIGNMENT 0 YS2-6l13.p1k chr13 832 747 359792 359791 C 86 0.00 1297 ambiguous_trans 15 ALIGNMENT 0 YS2-6l13.p1k chr13 747 832 187296 187295 F 86 0.00 1297 ambiguous_trans 14 ALIGNMENT 947 YS2-6l13.p1k chr12 38 1143 943594 944708 F 1106 96.38 1297 ambiguous_trans 2 ALIGNMENT 213 YS2-6l13.p1k chr05 652 40 446279 446892 C 613 79.28 1297 ambiguous_trans 17 ALIGNMENT 917 YS2-6l13.p1k chr06 38 1143 140313 141427 F 1106 95.48 1297 ambiguous_trans 6 ALIGNMENT 0 YS2-6l13.p1k chr13 832 747 375490 375489 C 86 0.00 1297 ambiguous_trans 23 ALIGNMENT 197 YS2-6l13.p1k chr13 746 114 375489 376121 C 633 78.20 1297 ambiguous_trans 23 ALIGNMENT 0 YS2-6l13.p1k chr02 62 170 223593 223592 F 109 0.00 1297 ambiguous_trans 26 ALIGNMENT 0 YS2-6l13.p1k chr13 113 62 376122 376121 C 52 0.00 1297 ambiguous_trans 23 ALIGNMENT 0 YS2-6l13.p1k chr13 624 832 199340 199339 F 209 0.00 1297 ambiguous_trans 21 ALIGNMENT 0 YS2-6l13.p1k chr05 832 747 495285 495284 C 86 0.00 1297 ambiguous_trans 24 ALIGNMENT 213 YS2-6l13.p1k chr04 652 40 989602 990215 C 613 79.28 1297 ambiguous_trans 16 ALIGNMENT 0 YS2-6l13.p1k chr16 832 653 807525 807524 C 180 0.00 1297 ambiguous_trans 19 ALIGNMENT 0 YS2-6l13.p1k chr16 747 832 847543 847542 F 86 0.00 1297 ambiguous_trans 20 ALIGNMENT 0 YS2-6l13.p1k chr10 747 832 475509 475508 F 86 0.00 1297 ambiguous_trans 27 ALIGNMENT 890 YS2-6l13.p1k chr15 1143 38 706504 707618 C 1106 94.67 1297 ambiguous_trans 11 ALIGNMENT 213 YS2-6l13.p1k chr13 746 40 359791 360498 C 707 77.93 1297 ambiguous_trans 15 ALIGNMENT 929 YS2-6l13.p1k chr03 38 1143 87215 88329 F 1106 95.84 1297 ambiguous_trans 3 ALIGNMENT 213 YS2-6l13.p1k chr16 652 40 807524 808137 C 613 79.28 1297 ambiguous_trans 19 ALIGNMENT 213 YS2-6l13.p1k chr13 40 746 186589 187296 F 707 77.93 1297 ambiguous_trans 14 ALIGNMENT 929 YS2-6l13.p1k chr04 1143 38 516124 517238 C 1106 95.84 1297 ambiguous_trans 4 ALIGNMENT 887 YS2-6l13.p1k chr15 38 1143 972687 973801 F 1106 94.58 1297 ambiguous_trans 13 ALIGNMENT 213 YS2-6l13.p1k chr10 40 652 480386 480999 F 613 79.28 1297 ambiguous_trans 18 ALIGNMENT 0 YS2-6l13.p1k chr05 832 653 446280 446279 C 180 0.00 1297 ambiguous_trans 17 ALIGNMENT 893 YS2-6l13.p1k chr04 38 1143 874221 875335 F 1106 94.76 1297 ambiguous_trans 9 ALIGNMENT 0 YS2-6l13.p1k chr10 653 832 480999 480998 F 180 0.00 1297 ambiguous_trans 18 ALIGNMENT 896 YS2-6l13.p1k chr14 1143 38 564473 565587 C 1106 94.85 1297 ambiguous_trans 8 ALIGNMENT 0 YS2-6l13.p1k chr07 113 62 820818 820817 C 52 0.00 1297 ambiguous_trans 25 ALIGNMENT 205 YS2-6l13.p1k chr16 40 746 846833 847543 F 707 77.79 1297 ambiguous_trans 20 ALIGNMENT 887 YS2-6l13.p1k chr12 1143 38 978177 979291 C 1106 94.58 1297 ambiguous_trans 12 ALIGNMENT 0 YS2-6l13.p1k chr05 113 62 495917 495916 C 52 0.00 1297 ambiguous_trans 24 ALIGNMENT 892 YS2-6l13.p1k chr07 1143 38 571184 572299 C 1106 94.76 1297 ambiguous_trans 10 ALIGNMENT 0 YS2-6l13.p1k chr04 832 653 989603 989602 C 180 0.00 1297 ambiguous_trans 16 ALIGNMENT 0 YS2-6l13.p1k chr02 747 832 224168 224167 F 86 0.00 1297 ambiguous_trans 26 ALIGNMENT 194 YS2-6l13.p1k chr05 746 114 495284 495916 C 633 78.04 1297 ambiguous_trans 24 ALIGNMENT 917 YS2-6l13.p1k chr07 38 1143 813857 814971 F 1106 95.48 1297 ambiguous_trans 7 ALIGNMENT 0 YS2-6l13.p1k chr07 832 747 820186 820185 C 86 0.00 1297 ambiguous_trans 25 ALIGNMENT 194 YS2-6l13.p1k chr07 746 114 820185 820817 C 633 78.04 1297 ambiguous_trans 25 ALIGNMENT 959 YS2-6l13.p1k chr02 38 1143 32046 33160 F 1106 96.75 1297 ambiguous_trans 1 ALIGNMENT 186 YS2-6l13.p1k chr10 171 746 474934 475509 F 576 78.65 1297 ambiguous_trans 27 ALIGNMENT 189 YS2-6l13.p1k chr02 171 746 223593 224168 F 576 78.82 1297 ambiguous_trans 26 ALIGNMENT 0 YS2-6l13.p1k chr16 832 747 853419 853418 C 86 0.00 1297 ambiguous_trans 22 ALIGNMENT 206 YS2-6l13.p1k chr13 40 623 198756 199340 F 584 79.45 1297 ambiguous_trans 21 ALIGNMENT 622 YS2-6l14.q1k chr13 6 721 858010 858724 F 716 96.37 1436 accept 0 ALIGNMENT 938 YS2-6l14.p1k chr13 1051 36 861700 862717 C 1016 97.54 1251 accept 0 ALIGNMENT 0 YS2-6l15.p1k chr02 245 262 215340 215339 F 18 0.00 262 accept 0 ALIGNMENT 168 YS2-6l15.p1k chr02 35 244 215132 215340 F 210 94.29 262 accept 0 ALIGNMENT 0 YS2-6l16.q1k vc_7 304 304 4700 4921 C 1 0.00 1084 reject_low 7 ALIGNMENT 92 YS2-6l16.q1k vc_7 423 305 4583 4699 C 119 94.12 1084 reject_low 7 ALIGNMENT 0 YS2-6l16.q1k vc_4 237 62 113 112 C 176 0.00 1084 reject_low 8 ALIGNMENT 0 YS2-6l16.q1k vc_7 53 54 5172 6360 C 0 0.00 1084 reject_low 7 ALIGNMENT 0 YS2-6l16.q1k vc_4 62 237 1548 1547 F 176 0.00 1084 reject_low 6 ALIGNMENT 51 YS2-6l16.q1k vc_7 54 3 6360 6411 C 52 100.00 1084|1,0 reject_low 7 ALIGNMENT 296 YS2-6l16.q1k vc_2 1 303 2322 2624 F 303 99.34 1084 reject_low 4 ALIGNMENT 241 YS2-6l16.q1k vc_7 303 53 4922 5172 C 251 98.80 1084|0,1 reject_low 7 ALIGNMENT 384 YS2-6l16.q1k vc_4 423 1 5232 5654 C 423 97.40 1084 reject_low 2 ALIGNMENT 62 YS2-6l16.q1k vc_4 238 304 1548 1614 F 67 98.51 1084 reject_low 6 ALIGNMENT 62 YS2-6l16.q1k vc_4 304 238 46 112 C 67 98.51 1084 reject_low 8 ALIGNMENT 296 YS2-6l16.q1k vc_3 1 303 2689 2991 F 303 99.34 1084 reject_low 5 ALIGNMENT 458 YS2-6l16.q1k vc_7 658 1 1914 2569 C 658 90.73 1084 reject_vc 1 ALIGNMENT 458 YS2-6l16.q1k vc_5 1 658 2556 3211 F 658 90.88 1084 reject_vc 0 ALIGNMENT 62 YS2-6l16.q1k vc_4 304 238 6273 6339 C 67 98.51 1084 reject_low 9 ALIGNMENT 0 YS2-6l16.q1k vc_4 305 307 1615 1878 F 3 0.00 1084 reject_low 6 ALIGNMENT 296 YS2-6l16.q1k vc_1 1 303 2689 2991 F 303 99.34 1084 reject_low 3 ALIGNMENT 155 YS2-6l16.q1k vc_4 308 658 1879 2227 F 351 83.48 1084 reject_low 6 ALIGNMENT 0 YS2-6l16.q1k vc_4 237 62 6340 6339 C 176 0.00 1084 reject_low 9 ALIGNMENT 602 YS2-6l17.q1k chr16 2 753 295135 295882 F 752 94.28 1444 accept_chi 1 ALIGNMENT 932 YS2-6l17.p1k chr15 33 1225 747827 749023 F 1193 95.22 1281 accept_chi 0 ALIGNMENT 953 YS2-6l18.p1k chr09 1119 34 275885 276979 C 1086 96.41 1271 accept 0 ALIGNMENT 700 YS2-6l18.q1k chr09 30 918 273681 274565 F 889 93.81 1521 accept 0 ALIGNMENT 755 YS2-6l20.q1k chr12 34 969 334006 334934 F 936 94.98 1363 accept 0 ALIGNMENT 977 YS2-6l20.p1k chr12 1169 38 334987 336111 C 1132 96.47 1264 accept 0 ALIGNMENT 172 YS2-6l21.p1k chr16 33 206 833674 833847 F 174 100.00 225 accept_chi 0 ALIGNMENT 39 YS2-6l21.q1k vc_5 246 208 5025 5063 C 39 100.00 1398 reject_low 14 ALIGNMENT 0 YS2-6l21.q1k vc_4 640 333 113 1447 C 308 0.00 1398 reject_low 19 ALIGNMENT 0 YS2-6l21.q1k vc_4 62 205 5831 5830 F 144 0.00 1398 reject_low 9 ALIGNMENT 41 YS2-6l21.q1k vc_2 246 206 2105 2145 C 41 100.00 1398 reject_low 12 ALIGNMENT 0 YS2-6l21.q1k vc_5 207 62 5064 5063 C 146 0.00 1398 reject_low 14 ALIGNMENT 145 YS2-6l21.q1k vc_4 246 407 6353 6514 F 162 96.91 1398|1,0 reject_low 9 ALIGNMENT 0 YS2-6l21.q1k vc_7 405 62 6412 6411 C 344 0.00 1398 reject_low 8 ALIGNMENT 49 YS2-6l21.q1k vc_4 705 641 6275 6339 C 65 92.31 1398 reject_low 15 ALIGNMENT 38 YS2-6l21.q1k vc_7 209 246 13525 13562 F 38 100.00 1398 reject_low 17 ALIGNMENT 145 YS2-6l21.q1k vc_4 246 407 126 287 F 162 96.91 1398 reject_low 10 ALIGNMENT 0 YS2-6l21.q1k chr16 457 207 833675 833674 C 251 0.00 1398 accept_chi 1 ALIGNMENT 0 YS2-6l21.q1k vc_4 408 640 288 1547 F 233 0.00 1398 reject_low 10 ALIGNMENT 0 YS2-6l21.q1k vc_3 62 245 2531 2530 F 184 0.00 1398 reject_vc 7 ALIGNMENT 0 YS2-6l21.q1k vc_3 457 247 2473 2472 C 211 0.00 1398 reject_low 13 ALIGNMENT 0 YS2-6l21.q1k vc_7 62 208 13525 13524 F 147 0.00 1398 reject_low 17 ALIGNMENT 0 YS2-6l21.q1k vc_4 245 62 5813 5812 C 184 0.00 1398 reject_vc 4 ALIGNMENT 0 YS2-6l21.q1k vc_4 62 245 126 125 F 184 0.00 1398 reject_low 10 ALIGNMENT 0 YS2-6l21.q1k vc_7 247 457 13562 13561 F 211 0.00 1398 reject_low 17 ALIGNMENT 0 YS2-6l21.q1k vc_7 245 62 2728 2727 C 184 0.00 1398 reject_vc 3 ALIGNMENT 0 YS2-6l21.q1k vc_5 457 247 5026 5025 C 211 0.00 1398 reject_low 14 ALIGNMENT 157 YS2-6l21.q1k chr16 206 33 833674 833847 C 174 97.13 1398 accept_chi 1 ALIGNMENT 41 YS2-6l21.q1k vc_3 246 206 2472 2512 C 41 100.00 1398 reject_low 13 ALIGNMENT 49 YS2-6l21.q1k vc_4 705 641 48 112 C 65 92.31 1398 reject_low 19 ALIGNMENT 0 YS2-6l21.q1k vc_7 456 457 5172 6360 C 0 0.00 1398 reject_low 8 ALIGNMENT 390 YS2-6l21.q1k vc_2 246 705 2164 2623 F 460 95.22 1398 reject_vc 6 ALIGNMENT 434 YS2-6l21.q1k vc_5 246 835 2398 2984 F 590 91.69 1398 reject_vc 2 ALIGNMENT 390 YS2-6l21.q1k vc_3 246 705 2531 2990 F 460 95.22 1398 reject_vc 7 ALIGNMENT 0 YS2-6l21.q1k vc_4 408 457 6514 6513 F 50 0.00 1398 reject_low 9 ALIGNMENT 41 YS2-6l21.q1k vc_1 246 206 2472 2512 C 41 100.00 1398 reject_low 11 ALIGNMENT 0 YS2-6l21.q1k vc_2 205 62 2146 2145 C 144 0.00 1398 reject_low 12 ALIGNMENT 198 YS2-6l21.q1k vc_7 705 456 4923 5172 C 250 93.20 1398|0,1 reject_low 8 ALIGNMENT 82 YS2-6l21.q1k vc_4 332 246 1448 1534 C 87 98.85 1398 reject_low 19 ALIGNMENT 48 YS2-6l21.q1k vc_7 457 406 6360 6411 C 52 98.08 1398|1,0 reject_low 8 ALIGNMENT 0 YS2-6l21.q1k vc_4 640 62 6340 6339 C 579 0.00 1398 reject_low 15 ALIGNMENT 0 YS2-6l21.q1k vc_5 62 245 2398 2397 F 184 0.00 1398 reject_vc 2 ALIGNMENT 0 YS2-6l21.q1k vc_1 457 247 2473 2472 C 211 0.00 1398 reject_low 11 ALIGNMENT 0 YS2-6l21.q1k vc_1 62 245 2531 2530 F 184 0.00 1398 reject_vc 5 ALIGNMENT 0 YS2-6l21.q1k vc_4 247 246 5872 6353 F 0 0.00 1398 reject_low 9 ALIGNMENT 0 YS2-6l21.q1k vc_1 205 62 2513 2512 C 144 0.00 1398 reject_low 11 ALIGNMENT 0 YS2-6l21.q1k vc_2 457 247 2106 2105 C 211 0.00 1398 reject_low 12 ALIGNMENT 38 YS2-6l21.q1k vc_7 209 246 63 100 F 38 100.00 1398 reject_low 16 ALIGNMENT 421 YS2-6l21.q1k vc_4 827 246 5232 5812 C 582 91.41 1398 reject_vc 4 ALIGNMENT 0 YS2-6l21.q1k vc_4 245 62 1535 1534 C 184 0.00 1398 reject_low 19 ALIGNMENT 434 YS2-6l21.q1k vc_7 835 246 2141 2727 C 590 91.69 1398 reject_vc 3 ALIGNMENT 41 YS2-6l21.q1k vc_4 206 246 5831 5871 F 41 100.00 1398 reject_low 9 ALIGNMENT 0 YS2-6l21.p1k chr16 207 225 833847 833846 F 19 0.00 225 accept_chi 0 ALIGNMENT 0 YS2-6l21.q1k vc_3 205 62 2513 2512 C 144 0.00 1398 reject_low 13 ALIGNMENT 0 YS2-6l21.q1k vc_7 62 208 63 62 F 147 0.00 1398 reject_low 16 ALIGNMENT 0 YS2-6l21.q1k vc_2 62 245 2164 2163 F 184 0.00 1398 reject_vc 6 ALIGNMENT 36 YS2-6l21.q1k vc_5 243 208 1 36 C 36 100.00 1398 reject_low 18 ALIGNMENT 390 YS2-6l21.q1k vc_1 246 705 2531 2990 F 460 95.22 1398 reject_vc 5 ALIGNMENT 0 YS2-6l21.q1k vc_7 247 457 100 99 F 211 0.00 1398 reject_low 16 ALIGNMENT 49 YS2-6l21.q1k vc_4 641 705 1548 1612 F 65 92.31 1398 reject_low 10 ALIGNMENT 0 YS2-6l21.q1k vc_5 207 62 37 36 C 146 0.00 1398 reject_low 18 ALIGNMENT 0 YS2-6l21.q1k vc_5 457 244 2 1 C 214 0.00 1398 reject_low 18 ALIGNMENT 106 YS2-6l22.q1k vc_7 673 868 13562 13757 F 196 85.71 1263 reject_low 3 ALIGNMENT 106 YS2-6l22.q1k vc_4 673 868 5871 6066 F 196 85.71 1263 reject_low 2 ALIGNMENT 594 YS2-6l22.p1k chr13 33 655 882284 882906 F 623 99.36 656 accept_chi 0 ALIGNMENT 0 YS2-6l22.q1k vc_7 122 672 13562 13561 F 551 0.00 1263 reject_low 3 ALIGNMENT 559 YS2-6l22.q1k chr13 35 655 882287 882906 F 621 97.75 1263 accept_chi 1 ALIGNMENT 0 YS2-6l22.q1k vc_4 122 672 5871 5870 F 551 0.00 1263 reject_low 2 ALIGNMENT 0 YS2-6l23.p1k chr12 62 453 489754 489753 F 392 0.00 1233 reject_low 2 ALIGNMENT 826 YS2-6l23.p1k chr12 99 1170 451419 452529 F 1072 93.94 1233 reject_low 1 ALIGNMENT 695 YS2-6l23.q1k chr12 924 27 455426 456309 C 898 93.54 1254 reject_low 1 ALIGNMENT 530 YS2-6l23.p1k chr12 454 1116 489754 490434 F 663 94.42 1233 reject_low 2 ALIGNMENT 0 YS2-6l23.p1k chr12 62 98 451419 451418 F 37 0.00 1233 reject_low 1 ALIGNMENT 884 YS2-6l23.p1k chr12 37 1170 460494 461666 F 1134 94.18 1233 accept 0 ALIGNMENT 695 YS2-6l23.q1k chr12 924 27 464563 465446 C 898 93.54 1254 accept 0 ALIGNMENT 686 YS2-6l24.p1k chr07 1219 35 562441 563634 C 1185 87.59 1256 ambiguous_trans 15 ALIGNMENT 676 YS2-6l24.p1k chr12 778 36 976780 977522 C 743 98.52 1256 ambiguous_trans 20 ALIGNMENT 653 YS2-6l24.p1k chr16 35 1125 848545 849639 F 1091 88.18 1256 ambiguous_trans 22 ALIGNMENT 671 YS2-6l24.p1k chr01 1125 35 160935 162029 C 1091 88.73 1256 ambiguous_trans 19 ALIGNMENT 924 YS2-6l24.p1k chr04 1129 36 514372 515469 C 1094 96.34 1256 ambiguous_trans 10 ALIGNMENT 653 YS2-6l24.p1k chr13 35 1125 188298 189392 F 1091 88.18 1256 ambiguous_trans 21 ALIGNMENT 940 YS2-6l24.p1k chr06 36 1219 142082 143274 F 1184 94.85 1256 ambiguous_trans 2 ALIGNMENT 644 YS2-6l24.p1k chr16 1125 35 851322 852416 C 1091 87.90 1256 ambiguous_trans 24 ALIGNMENT 856 YS2-6l24.p1k chr04 36 1125 985339 986432 F 1090 94.40 1256 ambiguous_trans 12 ALIGNMENT 728 YS2-6l24.p1k chr04 1219 35 878892 880085 C 1185 88.78 1256 ambiguous_trans 14 ALIGNMENT 680 YS2-6l24.p1k chr16 1219 35 805235 806428 C 1185 87.43 1256 ambiguous_trans 16 ALIGNMENT 644 YS2-6l24.p1k chr13 35 1125 200465 201559 F 1091 87.90 1256 ambiguous_trans 23 ALIGNMENT 940 YS2-6l24.p1k chr07 36 1219 815626 816818 F 1184 94.85 1256 ambiguous_trans 3 ALIGNMENT 933 YS2-6l24.p1k chr14 1219 36 562626 563818 C 1184 94.59 1256 ambiguous_trans 5 ALIGNMENT 957 YS2-6l24.p1k chr15 1129 36 704752 705849 C 1094 97.35 1256 ambiguous_trans 6 ALIGNMENT 680 YS2-6l24.p1k chr10 35 1125 476511 477605 F 1091 89.00 1256 ambiguous_trans 18 ALIGNMENT 948 YS2-6l24.p1k chr04 36 1129 875990 877087 F 1094 97.07 1256 ambiguous_trans 7 ALIGNMENT 442 YS2-6l24.p1k chr10 35 1066 482095 483129 F 1032 82.56 1256 ambiguous_trans 25 ALIGNMENT 930 YS2-6l24.p1k chr12 36 1129 945363 946460 F 1094 96.53 1256 ambiguous_trans 9 ALIGNMENT 939 YS2-6l24.p1k chr07 1219 36 569337 570529 C 1184 94.76 1256 ambiguous_trans 4 ALIGNMENT 936 YS2-6l24.p1k chr15 36 1129 974456 975553 F 1094 96.71 1256 ambiguous_trans 8 ALIGNMENT 731 YS2-6l24.p1k chr14 35 1219 523276 524469 F 1185 89.03 1256 ambiguous_trans 13 ALIGNMENT 940 YS2-6l24.p1k chr03 36 1219 88984 90176 F 1184 94.85 1256 ambiguous_trans 1 ALIGNMENT 542 YS2-6l24.q1k chr09 884 28 328716 329556 C 857 89.26 1307 accept 0 ALIGNMENT 909 YS2-6l24.p1k chr02 36 1129 33815 34912 F 1094 95.89 1256 ambiguous_trans 11 ALIGNMENT 751 YS2-6l24.p1k chr04 1129 35 646186 647284 C 1095 91.05 1256 ambiguous_trans 17 ALIGNMENT 685 YS2-6m01.q1k chr04 35 1037 32132 33107 F 1003 92.22 1392 accept 0 ALIGNMENT 565 YS2-6m01.p1k chr04 783 36 33784 34548 C 748 92.78 1388 accept 0 ALIGNMENT 775 YS2-6m02.q1k chr04 1014 32 1366270 1367240 C 983 94.20 1427 accept 0 ALIGNMENT 855 YS2-6m02.p1k chr04 35 1032 1363030 1364028 F 998 96.09 1261 accept 0 ALIGNMENT 979 YS2-6m03.p1k chr09 1123 32 308704 309802 C 1092 96.98 1321 accept 0 ALIGNMENT 743 YS2-6m03.q1k chr09 33 930 306815 307716 F 898 95.32 1271 accept 0 ALIGNMENT 0 YS2-6m05.p1k chr08 318 720 365426 365425 F 403 0.00 1335 reject_low 1 ALIGNMENT 581 YS2-6m05.q1k chr12 849 34 583976 584796 C 816 91.79 1323 accept 0 ALIGNMENT 0 YS2-6m05.p1k chr08 62 290 365400 365399 F 229 0.00 1335 reject_low 1 ALIGNMENT 20 YS2-6m05.p1k chr08 291 317 365400 365426 F 27 92.59 1335 reject_low 1 ALIGNMENT 854 YS2-6m05.p1k chr12 39 1097 583383 584441 F 1059 94.71 1335 accept 0 ALIGNMENT 0 YS2-6m06.q1k chr14 530 227 61959 61958 C 304 0.00 1305 reject_low 1 ALIGNMENT 648 YS2-6m06.q1k chr15 875 27 91384 92222 C 849 93.52 1305 accept 0 ALIGNMENT 915 YS2-6m06.p1k chr15 31 1101 86882 87957 F 1071 97.01 1301 accept 0 ALIGNMENT 166 YS2-6m06.q1k chr14 226 27 61958 62155 C 200 95.50 1305 reject_low 1 ALIGNMENT 744 YS2-6m08.q1k chr12 1083 25 1056103 1057162 C 1059 91.50 1421 accept 0 ALIGNMENT 951 YS2-6m08.p1k chr12 31 1159 1055615 1056743 F 1129 96.10 1323 accept 0 ALIGNMENT 961 YS2-6m10.p1k chr16 36 1126 629090 630188 F 1091 97.07 1327 accept 0 ALIGNMENT 542 YS2-6m10.q1k chr16 810 39 632898 633661 C 772 91.97 1418 accept 0 ALIGNMENT 51 YS2-6m11.q1k vc_7 54 3 6360 6411 C 52 100.00 590|1,0 reject_low 11 ALIGNMENT 180 YS2-6m11.p1k vc_7 1 322 456 778 F 322 86.96 531 reject_vc 1 ALIGNMENT 181 YS2-6m11.p1k vc_1 322 1 1427 1749 C 322 86.65 531 reject_low 2 ALIGNMENT 198 YS2-6m11.q1k vc_7 358 1 2207 2569 C 358 86.31 590 reject_vc 1 ALIGNMENT 191 YS2-6m11.q1k vc_4 358 1 5290 5654 C 358 85.75 590 reject_low 7 ALIGNMENT 181 YS2-6m11.p1k vc_2 322 1 1427 1749 C 322 86.65 531 reject_low 3 ALIGNMENT 134 YS2-6m11.q1k vc_7 278 53 4945 5172 C 226 87.17 590|0,1 reject_low 11 ALIGNMENT 188 YS2-6m11.q1k vc_1 1 278 2689 2968 F 278 89.93 590 reject_low 8 ALIGNMENT 198 YS2-6m11.q1k vc_5 1 358 2556 2918 F 358 86.31 590 reject_vc 0 ALIGNMENT 0 YS2-6m11.q1k vc_7 53 54 5172 6360 C 0 0.00 590 reject_low 11 ALIGNMENT 181 YS2-6m11.p1k vc_3 322 1 1427 1749 C 322 86.65 531 reject_low 4 ALIGNMENT 181 YS2-6m11.p1k vc_5 322 1 4347 4669 C 322 86.65 531 reject_vc 0 ALIGNMENT 180 YS2-6m11.p1k vc_7 1 322 13918 14240 F 322 86.96 531 reject_low 6 ALIGNMENT 180 YS2-6m11.p1k vc_6 1 322 3712 4034 F 322 86.96 531 reject_low 5 ALIGNMENT 188 YS2-6m11.q1k vc_3 1 278 2689 2968 F 278 89.93 590 reject_low 10 ALIGNMENT 188 YS2-6m11.q1k vc_2 1 278 2322 2601 F 278 89.93 590 reject_low 9 ALIGNMENT 0 YS2-6m13.q1k vc_5 594 122 35 34 C 473 0.00 1378 reject_low 16 ALIGNMENT 0 YS2-6m13.q1k vc_4 632 631 5872 6353 F 0 0.00 1378 reject_low 9 ALIGNMENT 0 YS2-6m13.p1k chr05 602 584 461191 461190 C 19 0.00 602 accept_chi 0 ALIGNMENT 0 YS2-6m13.q1k vc_5 122 630 2398 2397 F 509 0.00 1378 reject_low 5 ALIGNMENT 34 YS2-6m13.q1k vc_5 628 595 1 34 C 34 100.00 1378 reject_low 16 ALIGNMENT 37 YS2-6m13.q1k vc_7 595 631 64 100 F 37 100.00 1378 reject_low 15 ALIGNMENT 0 YS2-6m13.q1k vc_1 122 630 2531 2530 F 509 0.00 1378 reject_low 2 ALIGNMENT 215 YS2-6m13.q1k vc_5 631 947 2398 2712 F 317 90.54 1378 reject_low 5 ALIGNMENT 215 YS2-6m13.q1k vc_7 947 631 2413 2727 C 317 90.54 1378 reject_low 6 ALIGNMENT 0 YS2-6m13.q1k vc_2 590 122 2146 2145 C 469 0.00 1378 reject_low 12 ALIGNMENT 536 YS2-6m13.p1k chr05 583 29 461190 461744 C 555 99.64 602 accept_chi 0 ALIGNMENT 215 YS2-6m13.q1k vc_1 631 947 2531 2845 F 317 90.54 1378 reject_low 2 ALIGNMENT 0 YS2-6m13.q1k vc_4 630 122 5813 5812 C 509 0.00 1378 reject_low 7 ALIGNMENT 0 YS2-6m13.q1k vc_4 630 122 1535 1534 C 509 0.00 1378 reject_low 10 ALIGNMENT 38 YS2-6m13.q1k vc_1 631 591 2472 2512 C 41 97.56 1378 reject_low 11 ALIGNMENT 215 YS2-6m13.q1k vc_3 631 947 2531 2845 F 317 90.54 1378 reject_low 4 ALIGNMENT 0 YS2-6m13.q1k vc_2 122 630 2164 2163 F 509 0.00 1378 reject_low 3 ALIGNMENT 79 YS2-6m13.q1k vc_4 719 631 1446 1534 C 89 96.63 1378 reject_low 10 ALIGNMENT 0 YS2-6m13.q1k vc_1 590 122 2513 2512 C 469 0.00 1378 reject_low 11 ALIGNMENT 524 YS2-6m13.q1k chr05 40 591 461195 461744 F 552 99.09 1378 accept_chi 1 ALIGNMENT 0 YS2-6m13.q1k vc_3 122 630 2531 2530 F 509 0.00 1378 reject_low 4 ALIGNMENT 38 YS2-6m13.q1k vc_2 631 591 2105 2145 C 41 97.56 1378 reject_low 12 ALIGNMENT 0 YS2-6m13.q1k vc_4 122 590 5831 5830 F 469 0.00 1378 reject_low 9 ALIGNMENT 0 YS2-6m13.q1k vc_4 122 630 126 125 F 509 0.00 1378 reject_low 8 ALIGNMENT 37 YS2-6m13.q1k vc_5 631 595 5025 5061 C 37 100.00 1378 reject_low 14 ALIGNMENT 215 YS2-6m13.q1k vc_2 631 947 2164 2478 F 317 90.54 1378 reject_low 3 ALIGNMENT 0 YS2-6m13.q1k vc_5 594 122 5062 5061 C 473 0.00 1378 reject_low 14 ALIGNMENT 210 YS2-6m13.q1k vc_4 947 631 5496 5812 C 317 90.22 1378 reject_low 7 ALIGNMENT 0 YS2-6m13.q1k vc_7 630 122 2728 2727 C 509 0.00 1378 reject_low 6 ALIGNMENT 0 YS2-6m13.q1k vc_3 590 122 2513 2512 C 469 0.00 1378 reject_low 13 ALIGNMENT 132 YS2-6m13.q1k vc_4 631 794 126 287 F 164 94.51 1378 reject_low 8 ALIGNMENT 38 YS2-6m13.q1k vc_3 631 591 2472 2512 C 41 97.56 1378 reject_low 13 ALIGNMENT 0 YS2-6m13.q1k vc_7 122 594 64 63 F 473 0.00 1378 reject_low 15 ALIGNMENT 132 YS2-6m13.q1k vc_4 631 794 6353 6514 F 164 94.51 1378|1,0 reject_low 9 ALIGNMENT 38 YS2-6m13.q1k vc_4 591 631 5831 5871 F 41 97.56 1378 reject_low 9 ALIGNMENT 32 YS2-6m14.q1k vc_3 305 266 2474 2512 C 40 95.00 1358 reject_low 17 ALIGNMENT 400 YS2-6m14.p1k vc_2 608 1 1148 1749 C 608 90.30 735 reject_low 3 ALIGNMENT 32 YS2-6m14.q1k vc_1 305 266 2474 2512 C 40 95.00 1358 reject_low 15 ALIGNMENT 397 YS2-6m14.p1k vc_6 1 487 3712 4199 F 487 94.66 735 reject_low 6 ALIGNMENT 32 YS2-6m14.q1k vc_4 266 305 5831 5869 F 40 95.00 1358 reject_low 12 ALIGNMENT 403 YS2-6m14.p1k vc_5 608 1 4068 4669 C 608 90.46 735 reject_vc 0 ALIGNMENT 131 YS2-6m14.q1k vc_4 306 469 125 287 F 164 93.90 1358 reject_low 11 ALIGNMENT 400 YS2-6m14.p1k vc_1 608 1 1148 1749 C 608 90.30 735 reject_low 2 ALIGNMENT 196 YS2-6m14.q1k vc_7 614 306 2424 2728 C 309 89.32 1358 reject_vc 1 ALIGNMENT 196 YS2-6m14.q1k vc_2 306 614 2163 2467 F 309 89.32 1358 reject_low 8 ALIGNMENT 393 YS2-6m14.p1k vc_7 1 594 456 1044 F 594 90.24 735 reject_vc 1 ALIGNMENT 196 YS2-6m14.q1k vc_5 306 614 2397 2701 F 309 89.32 1358 reject_vc 0 ALIGNMENT 400 YS2-6m14.p1k vc_3 608 1 1148 1749 C 608 90.30 735 reject_low 4 ALIGNMENT 189 YS2-6m14.q1k vc_4 614 306 5507 5813 C 309 88.67 1358 reject_low 10 ALIGNMENT 30 YS2-6m14.q1k vc_5 305 268 5027 5063 C 38 94.74 1358 reject_low 18 ALIGNMENT 29 YS2-6m14.q1k vc_5 304 268 1 36 C 37 94.59 1358 reject_low 20 ALIGNMENT 0 YS2-6m14.q1k vc_4 306 305 5870 6351 F 0 0.00 1358 reject_low 12 ALIGNMENT 83 YS2-6m14.q1k vc_4 394 306 1448 1535 C 89 98.88 1358 reject_low 13 ALIGNMENT 131 YS2-6m14.q1k vc_4 306 469 6352 6514 F 164 93.90 1358 reject_low 12 ALIGNMENT 393 YS2-6m14.p1k vc_7 1 594 13918 14506 F 594 90.24 735 reject_low 5 ALIGNMENT 29 YS2-6m14.q1k vc_7 269 305 13525 13560 F 37 94.59 1358 reject_low 19 ALIGNMENT 196 YS2-6m14.q1k vc_3 306 614 2530 2834 F 309 89.32 1358 reject_low 9 ALIGNMENT 32 YS2-6m14.q1k vc_2 305 266 2107 2145 C 40 95.00 1358 reject_low 16 ALIGNMENT 38 YS2-6m14.q1k vc_7 520 468 6360 6411 C 53 92.45 1358 reject_low 14 ALIGNMENT 196 YS2-6m14.q1k vc_1 306 614 2530 2834 F 309 89.32 1358 reject_low 7 ALIGNMENT 659 YS2-6m15.q1k chr12 34 731 489846 490543 F 698 98.28 1436 reject_low 2 ALIGNMENT 808 YS2-6m15.q1k chr12 34 1142 451878 452969 F 1109 92.16 1436 accept 0 ALIGNMENT 953 YS2-6m15.p1k chr12 1130 35 464866 465972 C 1096 96.62 1321 accept 1 ALIGNMENT 808 YS2-6m15.q1k chr12 34 1142 461015 462106 F 1109 92.16 1436 accept 1 ALIGNMENT 953 YS2-6m15.p1k chr12 1130 35 455729 456835 C 1096 96.62 1321 accept 0 ALIGNMENT 832 YS2-6m16.p1k chr16 38 896 733874 734731 F 859 99.30 1334 accept_chi 0 ALIGNMENT 689 YS2-6m16.q1k chr12 1123 99 467910 468930 C 1025 90.83 1395 manual 2 ALIGNMENT 0 YS2-6m16.q1k chr06 154 477 31622 31621 F 324 0.00 1395 reject_low 3 ALIGNMENT 0 YS2-6m16.q1k chr12 489 219 472465 472464 C 271 0.00 1395 reject_low 5 ALIGNMENT 0 YS2-6m16.q1k chr12 489 219 485697 485696 C 271 0.00 1395 reject_low 7 ALIGNMENT 0 YS2-6m16.q1k chr12 95 79 459797 459821 C 17 0.00 1395 manual 1 ALIGNMENT 692 YS2-6m16.q1k chr12 1123 96 458773 459796 C 1028 90.86 1395 manual 1 ALIGNMENT 0 YS2-6m16.q1k chr12 489 219 482045 482044 C 271 0.00 1395 reject_low 6 ALIGNMENT 94 YS2-6m16.q1k chr12 218 99 472464 472582 C 120 93.33 1395 reject_low 5 ALIGNMENT 97 YS2-6m16.q1k chr12 218 96 489348 489469 C 123 93.50 1395 reject_low 4 ALIGNMENT 85 YS2-6m16.q1k chr06 478 585 31622 31729 F 108 95.37 1395 reject_low 3 ALIGNMENT 94 YS2-6m16.q1k chr12 218 99 485696 485814 C 120 93.33 1395 reject_low 7 ALIGNMENT 0 YS2-6m16.q1k chr12 489 219 489349 489348 C 271 0.00 1395 reject_low 4 ALIGNMENT 94 YS2-6m16.q1k chr12 218 99 482044 482162 C 120 93.33 1395 reject_low 6 ALIGNMENT 20 YS2-6m16.q1k chr12 78 37 459822 459862 C 42 88.10 1395 manual 1 ALIGNMENT 0 YS2-6m19.q1k vc_4 527 92 1535 1534 C 436 0.00 1291 reject_low 11 ALIGNMENT 412 YS2-6m19.q1k chr12 487 28 464093 464551 C 460 97.39 1291 accept 0 ALIGNMENT 0 YS2-6m19.q1k vc_4 92 527 126 125 F 436 0.00 1291 reject_low 9 ALIGNMENT 412 YS2-6m19.q1k chr12 487 28 454956 455414 C 460 97.39 1291 reject_low 2 ALIGNMENT 254 YS2-6m19.q1k vc_7 895 528 2366 2727 C 368 91.03 1291 reject_low 7 ALIGNMENT 0 YS2-6m19.q1k vc_1 92 527 2531 2530 F 436 0.00 1291 reject_low 3 ALIGNMENT 0 YS2-6m19.q1k vc_5 92 527 2398 2397 F 436 0.00 1291 reject_low 6 ALIGNMENT 247 YS2-6m19.q1k vc_4 895 528 5449 5812 C 368 90.49 1291 reject_low 8 ALIGNMENT 0 YS2-6m19.q1k vc_5 488 92 5064 5063 C 397 0.00 1291 reject_low 16 ALIGNMENT 0 YS2-6m19.q1k vc_5 488 92 37 36 C 397 0.00 1291 reject_low 18 ALIGNMENT 254 YS2-6m19.q1k vc_1 528 895 2531 2892 F 368 91.03 1291 reject_low 3 ALIGNMENT 440 YS2-6m19.p1k chr12 41 498 454958 455414 F 458 99.34 516 accept 0 ALIGNMENT 39 YS2-6m19.q1k vc_1 528 484 2472 2515 C 45 97.78 1291 reject_low 13 ALIGNMENT 0 YS2-6m19.q1k vc_2 483 92 2149 2148 C 392 0.00 1291 reject_low 14 ALIGNMENT 0 YS2-6m19.q1k vc_7 687 92 6412 6411 C 596 0.00 1291 reject_low 12 ALIGNMENT 39 YS2-6m19.q1k vc_3 528 484 2472 2515 C 45 97.78 1291 reject_low 15 ALIGNMENT 254 YS2-6m19.q1k vc_2 528 895 2164 2525 F 368 91.03 1291 reject_low 4 ALIGNMENT 0 YS2-6m19.q1k vc_3 483 92 2516 2515 C 392 0.00 1291 reject_low 15 ALIGNMENT 39 YS2-6m19.q1k vc_2 528 484 2105 2148 C 45 97.78 1291 reject_low 14 ALIGNMENT 0 YS2-6m19.q1k vc_2 92 527 2164 2163 F 436 0.00 1291 reject_low 4 ALIGNMENT 52 YS2-6m19.q1k vc_7 895 738 5021 5172 C 158 80.38 1291|0,1 reject_low 12 ALIGNMENT 0 YS2-6m19.q1k vc_7 738 739 5172 6360 C 0 0.00 1291 reject_low 12 ALIGNMENT 32 YS2-6m19.q1k vc_5 525 489 1 36 C 37 97.30 1291 reject_low 18 ALIGNMENT 84 YS2-6m19.q1k vc_4 616 528 1446 1534 C 89 98.88 1291 reject_low 11 ALIGNMENT 154 YS2-6m19.q1k vc_4 528 689 6353 6514 F 162 98.77 1291|1,0 reject_low 10 ALIGNMENT 154 YS2-6m19.q1k vc_4 528 689 126 287 F 162 98.77 1291 reject_low 9 ALIGNMENT 0 YS2-6m19.q1k vc_7 92 489 13525 13524 F 398 0.00 1291 reject_low 17 ALIGNMENT 254 YS2-6m19.q1k vc_3 528 895 2531 2892 F 368 91.03 1291 reject_low 5 ALIGNMENT 254 YS2-6m19.q1k vc_5 528 895 2398 2759 F 368 91.03 1291 reject_low 6 ALIGNMENT 440 YS2-6m19.p1k chr12 41 498 464095 464551 F 458 99.34 516 reject_low 1 ALIGNMENT 0 YS2-6m19.q1k vc_4 529 528 5872 6353 F 0 0.00 1291 reject_low 10 ALIGNMENT 34 YS2-6m19.q1k vc_7 490 528 13525 13562 F 39 97.44 1291 reject_low 17 ALIGNMENT 39 YS2-6m19.q1k vc_4 484 528 5828 5871 F 45 97.78 1291 reject_low 10 ALIGNMENT 0 YS2-6m19.q1k vc_4 92 483 5828 5827 F 392 0.00 1291 reject_low 10 ALIGNMENT 0 YS2-6m19.p1k chr12 499 516 455414 455413 F 18 0.00 516 accept 0 ALIGNMENT 35 YS2-6m19.q1k vc_5 528 489 5025 5063 C 40 97.50 1291 reject_low 16 ALIGNMENT 0 YS2-6m19.q1k vc_4 527 92 5813 5812 C 436 0.00 1291 reject_low 8 ALIGNMENT 47 YS2-6m19.q1k vc_7 739 688 6360 6411 C 52 98.08 1291|1,0 reject_low 12 ALIGNMENT 0 YS2-6m19.q1k vc_7 527 92 2728 2727 C 436 0.00 1291 reject_low 7 ALIGNMENT 0 YS2-6m19.q1k vc_1 483 92 2516 2515 C 392 0.00 1291 reject_low 13 ALIGNMENT 0 YS2-6m19.q1k vc_3 92 527 2531 2530 F 436 0.00 1291 reject_low 5 ALIGNMENT 0 YS2-6m19.p1k chr12 499 516 464551 464550 F 18 0.00 516 reject_low 1 ALIGNMENT 0 YS2-6m20.p1k chr03 654 870 168928 168927 F 217 0.00 1285 reject_low 28 ALIGNMENT 0 YS2-6m20.p1k chr03 77 378 124188 124187 F 302 0.00 1285 reject_low 19 ALIGNMENT 0 YS2-6m20.p1k chr06 373 77 138189 138188 C 297 0.00 1285 reject_low 26 ALIGNMENT 0 YS2-6m20.p1k chr07 77 378 823037 823036 F 302 0.00 1285 reject_low 7 ALIGNMENT 0 YS2-6m20.p1k chr06 870 602 158409 158408 C 269 0.00 1285 reject_low 1 ALIGNMENT 186 YS2-6m20.p1k chr16 379 653 850682 850962 F 275 91.64 1285 reject_low 23 ALIGNMENT 0 YS2-6m20.p1k chr06 870 651 137659 137658 C 220 0.00 1285 reject_low 24 ALIGNMENT 0 YS2-6m20.p1k chr11 77 378 457840 457839 F 302 0.00 1285 reject_low 18 ALIGNMENT 84 YS2-6m20.p1k chr03 602 379 149531 149750 C 224 83.04 1285 reject_low 25 ALIGNMENT 0 YS2-6m20.p1k chr06 77 378 161855 161854 F 302 0.00 1285 reject_low 16 ALIGNMENT 0 YS2-6m20.p1k chr10 870 654 483550 483549 C 217 0.00 1285 reject_low 21 ALIGNMENT 70 YS2-6m20.p1k chr03 379 653 168652 168928 F 275 77.82 1285 reject_low 28 ALIGNMENT 0 YS2-6m20.p1k chr15 870 655 594821 594820 C 216 0.00 1285 reject_low 8 ALIGNMENT 0 YS2-6m20.p1k chr02 870 655 221040 221039 C 216 0.00 1285 reject_low 12 ALIGNMENT 0 YS2-6m20.p1k chr06 387 77 137908 137907 C 311 0.00 1285 reject_low 24 ALIGNMENT 0 YS2-6m20.p1k chr07 378 77 541633 541632 C 302 0.00 1285 reject_low 20 ALIGNMENT 0 YS2-6m20.p1k chr06 273 77 162293 162292 C 197 0.00 1285 reject_low 1 ALIGNMENT 0 YS2-6m20.p1k chr02 870 655 259576 259575 C 216 0.00 1285 reject_low 11 ALIGNMENT 194 YS2-6m20.p1k chr03 379 653 124188 124462 F 275 92.36 1285 reject_low 19 ALIGNMENT 139 YS2-6m20.p1k chr06 650 388 137658 137907 C 263 88.59 1285 reject_low 24 ALIGNMENT 0 YS2-6m20.p1k chr15 378 77 595096 595095 C 302 0.00 1285 reject_low 8 ALIGNMENT 0 YS2-6m20.p1k chr03 77 378 168652 168651 F 302 0.00 1285 reject_low 28 ALIGNMENT 212 YS2-6m20.p1k chr08 379 653 543667 543941 F 275 94.55 1285 reject_low 14 ALIGNMENT 186 YS2-6m20.p1k chr12 379 653 215138 215418 F 275 91.64 1285 reject_low 22 ALIGNMENT 216 YS2-6m20.p1k chr07 379 654 823037 823312 F 276 94.93 1285 reject_low 7 ALIGNMENT 218 YS2-6m20.p1k chr02 653 379 226624 226898 C 275 95.27 1285 reject_low 3 ALIGNMENT 215 YS2-6m20.p1k chr07 379 653 817455 817729 F 275 94.91 1285 reject_low 10 ALIGNMENT 0 YS2-6m20.p1k chr13 77 378 362643 362642 F 302 0.00 1285 reject_low 6 ALIGNMENT 0 YS2-6m20.p1k chr08 654 870 116747 116746 F 217 0.00 1285 reject_low 17 ALIGNMENT 73 YS2-6m20.p1k chr06 355 274 162211 162292 C 82 96.34 1285 reject_low 1 ALIGNMENT 218 YS2-6m20.p1k chr13 379 653 362643 362917 F 275 95.27 1285 reject_low 6 ALIGNMENT 0 YS2-6m20.p1k chr08 77 378 116473 116472 F 302 0.00 1285 reject_low 17 ALIGNMENT 0 YS2-6m20.p1k chr03 870 655 151518 151517 C 216 0.00 1285 reject_low 9 ALIGNMENT 0 YS2-6m20.p1k chr12 654 870 215418 215417 F 217 0.00 1285 reject_low 22 ALIGNMENT 61 YS2-6m20.p1k chr06 653 374 137908 138188 C 280 76.79 1285 reject_low 26 ALIGNMENT 0 YS2-6m20.p1k chr02 378 77 265436 265435 C 302 0.00 1285 reject_low 13 ALIGNMENT 218 YS2-6m20.p1k chr13 379 653 357061 357335 F 275 95.27 1285 reject_low 5 ALIGNMENT 0 YS2-6m20.p1k chr02 378 77 226899 226898 C 302 0.00 1285 reject_low 3 ALIGNMENT 0 YS2-6m20.p1k chr11 654 870 517426 517425 F 217 0.00 1285 reject_low 4 ALIGNMENT 0 YS2-6m20.p1k chr12 77 378 215138 215137 F 302 0.00 1285 reject_low 22 ALIGNMENT 0 YS2-6m20.p1k chr06 870 654 143536 143535 C 217 0.00 1285 reject_low 27 ALIGNMENT 0 YS2-6m20.p1k chr06 870 654 137909 137908 C 217 0.00 1285 reject_low 26 ALIGNMENT 0 YS2-6m20.p1k chr07 77 378 817455 817454 F 302 0.00 1285 reject_low 10 ALIGNMENT 219 YS2-6m20.p1k chr07 654 379 535214 535489 C 276 95.29 1285 reject_low 2 ALIGNMENT 0 YS2-6m20.p1k chr08 77 378 543667 543666 F 302 0.00 1285 reject_low 14 ALIGNMENT 0 YS2-6m20.p1k chr07 378 77 535490 535489 C 302 0.00 1285 reject_low 2 ALIGNMENT 200 YS2-6m20.p1k chr11 379 653 457840 458114 F 275 93.09 1285 reject_low 18 ALIGNMENT 214 YS2-6m20.p1k chr03 654 379 151517 151791 C 276 94.93 1285 reject_low 9 ALIGNMENT 0 YS2-6m20.p1k chr10 378 77 483830 483829 C 302 0.00 1285 reject_low 21 ALIGNMENT 0 YS2-6m20.p1k chr02 870 654 226625 226624 C 217 0.00 1285 reject_low 3 ALIGNMENT 0 YS2-6m20.p1k chr13 77 378 357061 357060 F 302 0.00 1285 reject_low 5 ALIGNMENT 612 YS2-6m20.q1k chr03 844 26 147057 147869 C 819 92.55 1447 accept 0 ALIGNMENT 213 YS2-6m20.p1k chr02 654 379 259575 259850 C 276 94.57 1285 reject_low 11 ALIGNMENT 203 YS2-6m20.p1k chr06 379 653 161855 162129 F 275 93.45 1285 reject_low 16 ALIGNMENT 0 YS2-6m20.p1k chr03 378 77 151792 151791 C 302 0.00 1285 reject_low 9 ALIGNMENT 0 YS2-6m20.p1k chr11 77 378 517152 517151 F 302 0.00 1285 reject_low 4 ALIGNMENT 0 YS2-6m20.p1k chr02 378 77 221317 221316 C 302 0.00 1285 reject_low 12 ALIGNMENT 212 YS2-6m20.p1k chr02 654 379 221039 221316 C 276 94.57 1285 reject_low 12 ALIGNMENT 61 YS2-6m20.p1k chr06 653 374 143535 143815 C 280 76.79 1285 reject_low 27 ALIGNMENT 218 YS2-6m20.p1k chr11 379 653 517152 517426 F 275 95.27 1285 reject_low 4 ALIGNMENT 0 YS2-6m20.p1k chr13 654 870 362917 362916 F 217 0.00 1285 reject_low 6 ALIGNMENT 0 YS2-6m20.p1k chr06 378 356 158628 162210 C 23 0.00 1285 reject_low 1 ALIGNMENT 0 YS2-6m20.p1k chr07 378 77 931966 931965 C 302 0.00 1285 reject_low 15 ALIGNMENT 0 YS2-6m20.p1k chr06 654 870 162129 162128 F 217 0.00 1285 reject_low 16 ALIGNMENT 0 YS2-6m20.p1k chr08 654 870 543941 543940 F 217 0.00 1285 reject_low 14 ALIGNMENT 0 YS2-6m20.p1k chr02 378 77 259851 259850 C 302 0.00 1285 reject_low 11 ALIGNMENT 189 YS2-6m20.p1k chr07 653 379 541352 541632 C 275 92.00 1285 reject_low 20 ALIGNMENT 209 YS2-6m20.p1k chr07 653 379 931691 931965 C 275 94.18 1285 reject_low 15 ALIGNMENT 0 YS2-6m20.p1k chr11 654 870 458114 458113 F 217 0.00 1285 reject_low 18 ALIGNMENT 212 YS2-6m20.p1k chr02 653 379 265161 265435 C 275 94.55 1285 reject_low 13 ALIGNMENT 0 YS2-6m20.p1k chr07 870 655 535215 535214 C 216 0.00 1285 reject_low 2 ALIGNMENT 79 YS2-6m20.p1k chr06 601 379 158408 158627 C 223 81.61 1285 reject_low 1 ALIGNMENT 216 YS2-6m20.p1k chr15 654 379 594820 595095 C 276 94.93 1285 reject_low 8 ALIGNMENT 0 YS2-6m20.p1k chr02 870 654 265162 265161 C 217 0.00 1285 reject_low 13 ALIGNMENT 0 YS2-6m20.p1k chr03 654 870 124462 124461 F 217 0.00 1285 reject_low 19 ALIGNMENT 0 YS2-6m20.p1k chr16 77 378 850682 850681 F 302 0.00 1285 reject_low 23 ALIGNMENT 0 YS2-6m20.p1k chr07 870 654 931692 931691 C 217 0.00 1285 reject_low 15 ALIGNMENT 0 YS2-6m20.p1k chr03 870 603 149532 149531 C 268 0.00 1285 reject_low 25 ALIGNMENT 0 YS2-6m20.p1k chr06 373 77 143816 143815 C 297 0.00 1285 reject_low 27 ALIGNMENT 0 YS2-6m20.p1k chr03 378 77 149751 149750 C 302 0.00 1285 reject_low 25 ALIGNMENT 203 YS2-6m20.p1k chr08 379 653 116473 116747 F 275 93.45 1285 reject_low 17 ALIGNMENT 990 YS2-6m20.p1k chr03 65 1236 142488 143674 F 1172 96.59 1285 accept 0 ALIGNMENT 0 YS2-6m20.p1k chr13 654 870 357335 357334 F 217 0.00 1285 reject_low 5 ALIGNMENT 0 YS2-6m20.p1k chr07 870 654 541353 541352 C 217 0.00 1285 reject_low 20 ALIGNMENT 0 YS2-6m20.p1k chr07 654 870 817729 817728 F 217 0.00 1285 reject_low 10 ALIGNMENT 189 YS2-6m20.p1k chr10 653 379 483549 483829 C 275 92.00 1285 reject_low 21 ALIGNMENT 0 YS2-6m20.p1k chr07 655 870 823312 823311 F 216 0.00 1285 reject_low 7 ALIGNMENT 0 YS2-6m20.p1k chr16 654 870 850962 850961 F 217 0.00 1285 reject_low 23 ALIGNMENT 65 YS2-6m21.q1k vc_7 424 305 4583 4699 C 120 87.50 790 reject_vc 7 ALIGNMENT 52 YS2-6m21.q1k vc_4 302 238 6275 6339 C 65 93.85 790 reject_low 10 ALIGNMENT 52 YS2-6m21.q1k vc_4 238 302 1548 1612 F 65 93.85 790 reject_vc 8 ALIGNMENT 0 YS2-6m21.q1k vc_7 304 303 4700 4922 C 2 0.00 790 reject_vc 7 ALIGNMENT 0 YS2-6m21.q1k vc_4 237 62 113 112 C 176 0.00 790 reject_low 9 ALIGNMENT 95 YS2-6m21.q1k vc_4 308 540 1879 2107 F 233 82.40 790 reject_vc 8 ALIGNMENT 222 YS2-6m21.q1k vc_7 302 53 4923 5172 C 250 96.40 790|0,1 reject_vc 7 ALIGNMENT 48 YS2-6m21.q1k vc_7 54 3 6360 6411 C 52 98.08 790|1,0 reject_vc 7 ALIGNMENT 273 YS2-6m21.q1k vc_3 1 302 2689 2990 F 302 97.02 790 reject_vc 6 ALIGNMENT 0 YS2-6m21.q1k vc_4 237 62 6340 6339 C 176 0.00 790 reject_low 10 ALIGNMENT 372 YS2-6m21.q1k vc_5 1 540 2556 3091 F 540 90.56 790 reject_vc 1 ALIGNMENT 273 YS2-6m21.q1k vc_1 1 302 2689 2990 F 302 97.02 790 reject_vc 4 ALIGNMENT 332 YS2-6m21.q1k vc_4 424 1 5232 5654 C 424 93.63 790 reject_vc 3 ALIGNMENT 224 YS2-6m21.p1k chr13 260 33 476034 476261 C 228 100.00 278 accept 0 ALIGNMENT 0 YS2-6m21.p1k chr13 278 261 476035 476034 C 18 0.00 278 accept 0 ALIGNMENT 0 YS2-6m21.q1k vc_7 53 54 5172 6360 C 0 0.00 790 reject_vc 7 ALIGNMENT 372 YS2-6m21.q1k vc_7 540 1 2034 2569 C 540 90.56 790 reject_vc 2 ALIGNMENT 52 YS2-6m21.q1k vc_4 302 238 48 112 C 65 93.85 790 reject_low 9 ALIGNMENT 0 YS2-6m21.q1k vc_4 62 237 1548 1547 F 176 0.00 790 reject_vc 8 ALIGNMENT 273 YS2-6m21.q1k vc_2 1 302 2322 2623 F 302 97.02 790 reject_vc 5 ALIGNMENT 0 YS2-6m21.q1k vc_4 303 307 1613 1878 F 5 0.00 790 reject_vc 8 ALIGNMENT 896 YS2-6m22.p1k chr16 1078 32 866855 867902 C 1047 96.56 1206 accept 0 ALIGNMENT 611 YS2-6m22.q1k chr16 33 1097 861577 862630 F 1065 86.57 1264 accept 0 ALIGNMENT 0 YS2-6m24.p1k chr05 182 828 312091 312090 F 647 0.00 1192 reject_low 4 ALIGNMENT 296 YS2-6m24.q1k chr07 54 647 793218 793804 F 594 84.51 1308 reject_bad_break 0 ALIGNMENT 0 YS2-6m24.p1k chr01 828 182 166269 166268 C 647 0.00 1192 reject_low 2 ALIGNMENT 630 YS2-6m24.p1k chr07 708 35 793895 794568 C 674 98.96 1192 reject_bad_break 0 ALIGNMENT 0 YS2-6m24.p1k chr07 847 709 793898 793894 C 139 0.00 1192 reject_bad_break 0 ALIGNMENT 0 YS2-6m24.p1k chr01 101 62 166348 166347 C 40 0.00 1192 reject_low 2 ALIGNMENT 125 YS2-6m24.p1k chr07 1075 848 793667 793897 C 228 87.28 1192 reject_bad_break 0 ALIGNMENT 0 YS2-6m24.p1k chr15 62 99 854176 854175 F 38 0.00 1192 reject_low 1 ALIGNMENT 0 YS2-6m24.p1k chr05 62 108 312019 312018 F 47 0.00 1192 reject_low 4 ALIGNMENT 69 YS2-6m24.p1k chr05 109 181 312019 312091 F 73 98.63 1192 reject_low 4 ALIGNMENT 0 YS2-6m24.p1k chr12 182 828 214956 214955 F 647 0.00 1192 reject_low 3 ALIGNMENT 0 YS2-6m24.p1k chr15 182 828 854256 854255 F 647 0.00 1192 reject_low 1 ALIGNMENT 70 YS2-6m24.p1k chr12 108 181 214883 214956 F 74 98.65 1192 reject_low 3 ALIGNMENT 73 YS2-6m24.p1k chr01 181 102 166268 166347 C 80 97.50 1192 reject_low 2 ALIGNMENT 0 YS2-6m24.p1k chr12 62 107 214883 214882 F 46 0.00 1192 reject_low 3 ALIGNMENT 74 YS2-6m24.p1k chr15 100 181 854176 854256 F 82 97.56 1192 reject_low 1 ALIGNMENT 887 YS2-6n02.p1k chr14 1122 41 702915 704017 C 1082 95.56 1237 accept 0 ALIGNMENT 845 YS2-6n02.q1k chr14 32 1033 699447 700443 F 1002 95.41 1414 accept 0 ALIGNMENT 864 YS2-6n03.p1k chr11 1049 30 100308 101345 C 1020 96.47 1254 accept_chi 0 ALIGNMENT 515 YS2-6n03.q1k chr11 786 28 100588 101345 C 759 89.99 1356 accept_chi 1 ALIGNMENT 0 YS2-6n04.q1k chr05 460 77 83209 83208 C 384 0.00 1298 reject_low 4 ALIGNMENT 925 YS2-6n04.p1k chr14 33 1117 715364 716461 F 1085 97.14 1272 accept 0 ALIGNMENT 29 YS2-6n04.q1k chr05 518 461 83151 83208 C 58 93.10 1298 reject_low 4 ALIGNMENT 22 YS2-6n04.q1k chr04 524 473 923050 923101 C 52 90.38 1298 reject_low 7 ALIGNMENT 0 YS2-6n04.q1k chr02 525 610 780461 780460 F 86 0.00 1298 reject_low 2 ALIGNMENT 0 YS2-6n04.q1k chr09 77 475 399990 399989 F 399 0.00 1298 reject_low 9 ALIGNMENT 21 YS2-6n04.q1k chr09 476 522 399990 400036 F 47 91.49 1298 reject_low 9 ALIGNMENT 0 YS2-6n04.q1k chr13 457 77 588623 588622 C 381 0.00 1298 reject_low 3 ALIGNMENT 0 YS2-6n04.q1k chr02 523 610 780414 780413 F 88 0.00 1298 reject_low 5 ALIGNMENT 0 YS2-6n04.q1k chr02 77 457 780350 780349 F 381 0.00 1298 reject_low 5 ALIGNMENT 0 YS2-6n04.q1k chr15 525 610 237026 237025 F 86 0.00 1298 reject_low 1 ALIGNMENT 0 YS2-6n04.q1k chr04 610 525 923051 923050 C 86 0.00 1298 reject_low 7 ALIGNMENT 0 YS2-6n04.q1k chr04 77 460 654334 654333 F 384 0.00 1298 reject_low 8 ALIGNMENT 31 YS2-6n04.q1k chr15 458 524 236960 237026 F 67 91.04 1298 reject_low 1 ALIGNMENT 26 YS2-6n04.q1k chr02 458 522 780350 780414 F 65 89.23 1298 reject_low 5 ALIGNMENT 547 YS2-6n04.q1k chr14 943 33 719949 720834 C 911 89.35 1298 accept 0 ALIGNMENT 0 YS2-6n04.q1k chr15 77 457 236960 236959 F 381 0.00 1298 reject_low 1 ALIGNMENT 29 YS2-6n04.q1k chr02 464 524 780401 780461 F 61 91.80 1298 reject_low 2 ALIGNMENT 21 YS2-6n04.q1k chr04 461 511 654334 654384 F 51 90.20 1298 reject_low 8 ALIGNMENT 0 YS2-6n04.q1k chr09 523 610 400036 400035 F 88 0.00 1298 reject_low 9 ALIGNMENT 0 YS2-6n04.q1k chr04 512 610 654384 654383 F 99 0.00 1298 reject_low 8 ALIGNMENT 28 YS2-6n04.q1k chr13 517 458 588563 588622 C 60 91.67 1298 reject_low 3 ALIGNMENT 0 YS2-6n04.q1k chr08 478 77 420604 420603 C 402 0.00 1298 reject_low 6 ALIGNMENT 0 YS2-6n04.q1k chr04 472 77 923102 923101 C 396 0.00 1298 reject_low 7 ALIGNMENT 28 YS2-6n04.q1k chr08 519 479 420563 420603 C 41 100.00 1298 reject_low 6 ALIGNMENT 0 YS2-6n04.q1k chr13 610 518 588564 588563 C 93 0.00 1298 reject_low 3 ALIGNMENT 0 YS2-6n04.q1k chr05 610 519 83152 83151 C 92 0.00 1298 reject_low 4 ALIGNMENT 0 YS2-6n04.q1k chr02 77 463 780401 780400 F 387 0.00 1298 reject_low 2 ALIGNMENT 0 YS2-6n04.q1k chr08 610 520 420564 420563 C 91 0.00 1298 reject_low 6 ALIGNMENT 785 YS2-6n05.q1k chr13 26 982 340888 341830 F 957 95.61 1345 accept 0 ALIGNMENT 920 YS2-6n05.p1k chr13 1099 30 344071 345153 C 1070 96.36 1293 accept 0 ALIGNMENT 618 YS2-6n06.q1k chr07 851 32 274196 275016 C 820 94.51 1362 accept 0 ALIGNMENT 977 YS2-6n06.p1k chr07 34 1096 270806 271870 F 1063 97.37 1321 accept 0 ALIGNMENT 900 YS2-6n07.p1k chr13 33 1093 155056 156137 F 1061 96.14 1291 accept 0 ALIGNMENT 730 YS2-6n07.q1k chr13 879 30 156389 157236 C 850 96.12 1483 accept 0 ALIGNMENT 381 YS2-6n08.q1k vc_7 513 1 2059 2569 C 513 92.01 960 reject_vc 2 ALIGNMENT 0 YS2-6n08.q1k vc_7 53 54 5172 6360 C 0 0.00 960 reject_vc 7 ALIGNMENT 381 YS2-6n08.q1k vc_5 1 513 2556 3066 F 513 92.01 960 reject_vc 1 ALIGNMENT 49 YS2-6n08.q1k vc_4 302 238 6275 6339 C 65 92.31 960 reject_low 10 ALIGNMENT 0 YS2-6n08.q1k vc_4 303 307 1613 1878 F 5 0.00 960 reject_vc 8 ALIGNMENT 0 YS2-6n08.q1k vc_7 304 303 4700 4922 C 2 0.00 960 reject_vc 7 ALIGNMENT 225 YS2-6n08.q1k vc_7 302 53 4923 5172 C 250 96.80 960|0,1 reject_vc 7 ALIGNMENT 97 YS2-6n08.q1k vc_4 308 513 1879 2082 F 206 83.98 960 reject_vc 8 ALIGNMENT 338 YS2-6n08.q1k vc_4 422 1 5233 5654 C 422 94.08 960 reject_vc 3 ALIGNMENT 49 YS2-6n08.q1k vc_4 238 302 1548 1612 F 65 92.31 960 reject_vc 8 ALIGNMENT 0 YS2-6n08.q1k vc_4 237 62 113 112 C 176 0.00 960 reject_low 9 ALIGNMENT 209 YS2-6n08.p1k chr06 33 254 35355 35576 F 222 98.20 273 accept 0 ALIGNMENT 279 YS2-6n08.q1k vc_1 1 302 2689 2990 F 302 97.68 960 reject_vc 4 ALIGNMENT 279 YS2-6n08.q1k vc_2 1 302 2322 2623 F 302 97.68 960 reject_vc 5 ALIGNMENT 0 YS2-6n08.q1k vc_4 237 62 6340 6339 C 176 0.00 960 reject_low 10 ALIGNMENT 51 YS2-6n08.q1k vc_7 54 3 6360 6411 C 52 100.00 960|1,0 reject_vc 7 ALIGNMENT 0 YS2-6n08.p1k chr06 255 273 35576 35575 F 19 0.00 273 accept 0 ALIGNMENT 0 YS2-6n08.q1k vc_4 62 237 1548 1547 F 176 0.00 960 reject_vc 8 ALIGNMENT 66 YS2-6n08.q1k vc_7 422 305 4584 4699 C 118 87.29 960 reject_vc 7 ALIGNMENT 279 YS2-6n08.q1k vc_3 1 302 2689 2990 F 302 97.68 960 reject_vc 6 ALIGNMENT 49 YS2-6n08.q1k vc_4 302 238 48 112 C 65 92.31 960 reject_low 9 ALIGNMENT 415 YS2-6n09.q1k chr04 40 631 1126034 1126617 F 592 92.06 1448 accept 0 ALIGNMENT 671 YS2-6n09.p1k chr04 1127 315 1130184 1131001 C 813 95.57 1340 accept 0 ALIGNMENT 926 YS2-6n11.p1k chr02 1091 31 180689 181759 C 1061 96.61 1269 accept 0 ALIGNMENT 764 YS2-6n11.q1k chr02 25 911 179453 180334 F 887 96.73 1292 accept 0 ALIGNMENT 125 YS2-6n12.p1k vc_3 1188 950 1864 2105 C 239 85.36 1345 reject_low 3 ALIGNMENT 864 YS2-6n12.p1k chr08 32 932 50512 51415 F 901 99.33 1345 accept 0 ALIGNMENT 20 YS2-6n12.p1k vc_2 931 950 2145 2164 F 20 100.00 1345 reject_low 9 ALIGNMENT 0 YS2-6n12.p1k vc_4 62 949 5871 5870 F 888 0.00 1345 reject_low 4 ALIGNMENT 26 YS2-6n12.p1k vc_3 980 950 2441 2472 C 31 96.77 1345 reject_low 15 ALIGNMENT 26 YS2-6n12.p1k vc_1 980 950 2441 2472 C 31 96.77 1345 reject_low 14 ALIGNMENT 0 YS2-6n12.p1k vc_5 949 62 5026 5025 C 888 0.00 1345 reject_low 5 ALIGNMENT 125 YS2-6n12.p1k vc_2 1188 950 1864 2105 C 239 85.36 1345 reject_low 2 ALIGNMENT 20 YS2-6n12.p1k vc_3 931 950 2512 2531 F 20 100.00 1345 reject_low 10 ALIGNMENT 0 YS2-6n12.p1k vc_4 930 62 5832 5831 C 869 0.00 1345 reject_low 11 ALIGNMENT 20 YS2-6n12.p1k vc_4 950 931 5812 5831 C 20 100.00 1345 reject_low 11 ALIGNMENT 0 YS2-6n12.p1k vc_3 949 62 2106 2105 C 888 0.00 1345 reject_low 3 ALIGNMENT 125 YS2-6n12.p1k vc_7 950 1188 13562 13803 F 239 85.77 1345 reject_low 7 ALIGNMENT 0 YS2-6n12.p1k vc_3 949 62 2473 2472 C 888 0.00 1345 reject_low 15 ALIGNMENT 20 YS2-6n12.p1k vc_7 950 931 2727 2746 C 20 100.00 1345 reject_low 13 ALIGNMENT 0 YS2-6n12.p1k vc_7 62 949 13562 13561 F 888 0.00 1345 reject_low 7 ALIGNMENT 0 YS2-6n12.p1k vc_1 62 930 2512 2511 F 869 0.00 1345 reject_low 8 ALIGNMENT 125 YS2-6n12.p1k vc_7 950 1188 100 341 F 239 85.77 1345 reject_low 6 ALIGNMENT 0 YS2-6n12.p1k vc_3 62 930 2512 2511 F 869 0.00 1345 reject_low 10 ALIGNMENT 125 YS2-6n12.p1k vc_5 1188 950 4784 5025 C 239 85.36 1345 reject_low 5 ALIGNMENT 0 YS2-6n12.p1k vc_1 949 62 2106 2105 C 888 0.00 1345 reject_low 1 ALIGNMENT 125 YS2-6n12.p1k vc_4 950 1188 5871 6112 F 239 85.77 1345 reject_low 4 ALIGNMENT 125 YS2-6n12.p1k vc_1 1188 950 1864 2105 C 239 85.36 1345 reject_low 1 ALIGNMENT 0 YS2-6n12.p1k vc_5 62 930 2379 2378 F 869 0.00 1345 reject_low 12 ALIGNMENT 20 YS2-6n12.p1k vc_5 931 950 2379 2398 F 20 100.00 1345 reject_low 12 ALIGNMENT 0 YS2-6n12.p1k vc_1 949 62 2473 2472 C 888 0.00 1345 reject_low 14 ALIGNMENT 20 YS2-6n12.p1k vc_1 931 950 2512 2531 F 20 100.00 1345 reject_low 8 ALIGNMENT 0 YS2-6n12.p1k vc_7 930 62 2747 2746 C 869 0.00 1345 reject_low 13 ALIGNMENT 598 YS2-6n12.q1k chr08 807 3 50584 51380 C 805 92.92 1256 accept 0 ALIGNMENT 0 YS2-6n12.p1k vc_2 62 930 2145 2144 F 869 0.00 1345 reject_low 9 ALIGNMENT 0 YS2-6n12.p1k vc_2 949 62 2106 2105 C 888 0.00 1345 reject_low 2 ALIGNMENT 0 YS2-6n12.p1k vc_7 62 949 100 99 F 888 0.00 1345 reject_low 6 ALIGNMENT 580 YS2-6n13.q1k chr08 824 46 194902 195677 C 779 93.32 1495 accept 0 ALIGNMENT 893 YS2-6n13.p1k chr08 38 1138 190226 191321 F 1101 94.10 1163 accept 0 ALIGNMENT 200 YS2-6n14.p1k vc_1 340 1 1402 1749 C 340 87.65 486 reject_vc 0 ALIGNMENT 200 YS2-6n14.p1k vc_7 1 340 456 803 F 340 87.65 486 reject_vc 5 ALIGNMENT 200 YS2-6n14.p1k vc_6 1 340 3712 4059 F 340 87.65 486 reject_vc 4 ALIGNMENT 200 YS2-6n14.p1k vc_3 340 1 1402 1749 C 340 87.65 486 reject_vc 2 ALIGNMENT 200 YS2-6n14.p1k vc_5 340 1 4322 4669 C 340 87.65 486 reject_vc 3 ALIGNMENT 200 YS2-6n14.p1k vc_7 1 340 13918 14265 F 340 87.65 486 reject_vc 6 ALIGNMENT 200 YS2-6n14.p1k vc_2 340 1 1402 1749 C 340 87.65 486 reject_vc 1 ALIGNMENT 944 YS2-6n15.p1k chr02 1126 39 409572 410657 C 1088 96.78 1359 accept 0 ALIGNMENT 836 YS2-6n16.q1k chr14 34 1070 144961 146004 F 1037 95.08 1398 accept 0 ALIGNMENT 957 YS2-6n16.p1k chr14 1121 30 148426 149525 C 1092 96.79 1285 accept 0 ALIGNMENT 904 YS2-6n17.p1k chr15 1084 38 795151 796203 C 1047 96.47 1218 accept 0 ALIGNMENT 778 YS2-6n17.q1k chr15 33 1184 790674 791814 F 1152 91.15 1293 accept 0 ALIGNMENT 58 YS2-6n18.q1k vc_4 240 302 1550 1612 F 63 98.41 1052 reject_low 7 ALIGNMENT 237 YS2-6n18.q1k vc_7 302 53 4923 5172 C 250 98.40 1052|0,1 reject_low 6 ALIGNMENT 440 YS2-6n18.q1k vc_7 589 1 1987 2569 C 589 92.53 1052 reject_vc 1 ALIGNMENT 48 YS2-6n18.q1k vc_7 54 3 6360 6411 C 52 98.08 1052|1,0 reject_low 6 ALIGNMENT 91 YS2-6n18.q1k vc_7 421 305 4583 4699 C 117 94.02 1052 reject_low 6 ALIGNMENT 288 YS2-6n18.q1k vc_1 1 302 2689 2990 F 302 98.68 1052 reject_low 3 ALIGNMENT 58 YS2-6n18.q1k vc_4 302 240 48 110 C 63 98.41 1052 reject_low 8 ALIGNMENT 0 YS2-6n18.q1k vc_4 239 62 6338 6337 C 178 0.00 1052 reject_low 9 ALIGNMENT 0 YS2-6n18.q1k vc_4 62 239 1550 1549 F 178 0.00 1052 reject_low 7 ALIGNMENT 440 YS2-6n18.q1k vc_5 1 589 2556 3138 F 589 92.53 1052 reject_vc 0 ALIGNMENT 147 YS2-6n18.q1k vc_4 308 589 1879 2154 F 282 86.17 1052 reject_low 7 ALIGNMENT 288 YS2-6n18.q1k vc_2 1 302 2322 2623 F 302 98.68 1052 reject_low 4 ALIGNMENT 373 YS2-6n18.q1k vc_4 421 1 5232 5654 C 421 96.67 1052 reject_low 2 ALIGNMENT 0 YS2-6n18.q1k vc_7 304 303 4700 4922 C 2 0.00 1052 reject_low 6 ALIGNMENT 288 YS2-6n18.q1k vc_3 1 302 2689 2990 F 302 98.68 1052 reject_low 5 ALIGNMENT 58 YS2-6n18.q1k vc_4 302 240 6275 6337 C 63 98.41 1052 reject_low 9 ALIGNMENT 0 YS2-6n18.q1k vc_7 53 54 5172 6360 C 0 0.00 1052 reject_low 6 ALIGNMENT 0 YS2-6n18.q1k vc_4 239 62 111 110 C 178 0.00 1052 reject_low 8 ALIGNMENT 0 YS2-6n18.q1k vc_4 303 307 1613 1878 F 5 0.00 1052 reject_low 7 ALIGNMENT 758 YS2-6n19.q1k chr02 34 1028 339955 340940 F 995 93.47 1295 accept 0 ALIGNMENT 668 YS2-6n20.q1k chr13 929 31 824133 825019 C 899 93.33 1455 accept 0 ALIGNMENT 965 YS2-6n20.p1k chr13 37 1126 823819 824908 F 1090 96.97 1295 accept 0 ALIGNMENT 992 YS2-6n22.p1k chr04 71 1220 1231196 1232333 F 1150 96.96 1332 accept 0 ALIGNMENT 547 YS2-6n22.q1k chr04 712 3 1234779 1235484 C 710 94.23 1315 accept 0 ALIGNMENT 906 YS2-6n23.p1k chr02 1097 37 137964 139024 C 1061 96.14 1196 accept_chi 0 ALIGNMENT 629 YS2-6n23.q1k chr04 797 40 817620 818376 C 758 94.99 1304 accept_chi 1 ALIGNMENT 20 YS2-6n24.p1k chr05 601 630 377449 377478 F 30 93.33 1189 reject_low 2 ALIGNMENT 21 YS2-6n24.p1k chr14 627 593 70031 70065 C 35 91.43 1189 reject_low 1 ALIGNMENT 0 YS2-6n24.p1k chr05 92 600 377449 377448 F 509 0.00 1189 reject_low 2 ALIGNMENT 889 YS2-6n24.p1k chr16 1187 71 907598 908721 C 1117 94.36 1189 accept 0 ALIGNMENT 0 YS2-6n24.p1k chr05 631 776 377478 377477 F 146 0.00 1189 reject_low 2 ALIGNMENT 0 YS2-6n24.p1k chr14 592 92 70066 70065 C 501 0.00 1189 reject_low 1 ALIGNMENT 0 YS2-6n24.p1k chr14 776 628 70032 70031 C 149 0.00 1189 reject_low 1 ALIGNMENT 912 YS2-6o02.p1k chr08 32 1043 380466 381482 F 1012 97.83 1340 accept 0 ALIGNMENT 290 YS2-6o02.q1k chr08 552 55 384756 385252 C 498 87.55 1464 accept 0 ALIGNMENT 0 YS2-6o04.q1k vc_5 688 62 5064 5063 C 627 0.00 1338 reject_low 17 ALIGNMENT 56 YS2-6o04.q1k vc_2 727 892 2164 2325 F 166 80.12 1338 reject_low 10 ALIGNMENT 0 YS2-6o04.q1k vc_3 687 62 2512 2511 C 626 0.00 1338 reject_low 16 ALIGNMENT 248 YS2-6o04.p1k vc_7 713 1044 100 448 F 332 92.77 1207 reject_low 7 ALIGNMENT 248 YS2-6o04.p1k vc_5 1044 713 4677 5025 C 332 92.77 1207 reject_low 2 ALIGNMENT 248 YS2-6o04.p1k vc_4 713 1044 5871 6219 F 332 92.77 1207 reject_low 6 ALIGNMENT 0 YS2-6o04.p1k vc_3 712 62 2106 2105 C 651 0.00 1207 reject_low 5 ALIGNMENT 0 YS2-6o04.q1k vc_7 62 689 63 62 F 628 0.00 1338 reject_low 18 ALIGNMENT 35 YS2-6o04.q1k vc_1 725 688 2474 2511 C 38 97.37 1338 reject_low 14 ALIGNMENT 56 YS2-6o04.q1k vc_3 727 892 2531 2692 F 166 80.12 1338 reject_low 11 ALIGNMENT 0 YS2-6o04.q1k vc_2 687 62 2145 2144 C 626 0.00 1338 reject_low 15 ALIGNMENT 34 YS2-6o04.q1k vc_5 725 689 5027 5063 C 37 97.30 1338 reject_low 17 ALIGNMENT 0 YS2-6o04.q1k vc_5 62 726 2398 2397 F 665 0.00 1338 reject_low 2 ALIGNMENT 0 YS2-6o04.p1k vc_3 894 747 2439 2438 C 148 0.00 1207 reject_low 13 ALIGNMENT 630 YS2-6o04.p1k chr05 695 37 282156 282813 C 659 99.54 1207 accept_chi 0 ALIGNMENT 584 YS2-6o04.q1k chr05 26 689 282156 282819 F 664 96.84 1338 accept_chi 1 ALIGNMENT 248 YS2-6o04.p1k vc_2 1044 713 1757 2105 C 332 92.77 1207 reject_low 4 ALIGNMENT 0 YS2-6o04.p1k vc_2 712 62 2106 2105 C 651 0.00 1207 reject_low 4 ALIGNMENT 0 YS2-6o04.q1k vc_5 688 62 37 36 C 627 0.00 1338 reject_low 19 ALIGNMENT 33 YS2-6o04.q1k vc_5 724 689 1 36 C 36 97.22 1338 reject_low 19 ALIGNMENT 0 YS2-6o04.q1k vc_2 62 726 2164 2163 F 665 0.00 1338 reject_low 10 ALIGNMENT 56 YS2-6o04.q1k vc_1 727 892 2531 2692 F 166 80.12 1338 reject_low 9 ALIGNMENT 0 YS2-6o04.p1k vc_7 62 712 100 99 F 651 0.00 1207 reject_low 7 ALIGNMENT 35 YS2-6o04.q1k vc_2 725 688 2107 2144 C 38 97.37 1338 reject_low 15 ALIGNMENT 0 YS2-6o04.q1k vc_1 62 726 2531 2530 F 665 0.00 1338 reject_low 9 ALIGNMENT 0 YS2-6o04.p1k vc_5 712 62 5026 5025 C 651 0.00 1207 reject_low 2 ALIGNMENT 28 YS2-6o04.p1k vc_1 746 713 2438 2472 C 34 94.12 1207 reject_low 12 ALIGNMENT 28 YS2-6o04.p1k vc_3 746 713 2438 2472 C 34 94.12 1207 reject_low 13 ALIGNMENT 0 YS2-6o04.q1k vc_1 687 62 2512 2511 C 626 0.00 1338 reject_low 14 ALIGNMENT 248 YS2-6o04.p1k vc_1 1044 713 1757 2105 C 332 92.77 1207 reject_low 3 ALIGNMENT 56 YS2-6o04.q1k vc_5 727 892 2398 2559 F 166 80.12 1338 reject_low 2 ALIGNMENT 33 YS2-6o04.q1k vc_7 690 725 63 98 F 36 97.22 1338 reject_low 18 ALIGNMENT 0 YS2-6o04.p1k vc_1 894 747 2439 2438 C 148 0.00 1207 reject_low 12 ALIGNMENT 248 YS2-6o04.p1k vc_7 713 1044 13562 13910 F 332 92.77 1207 reject_low 8 ALIGNMENT 0 YS2-6o04.p1k vc_7 62 712 13562 13561 F 651 0.00 1207 reject_low 8 ALIGNMENT 0 YS2-6o04.p1k vc_3 712 62 2473 2472 C 651 0.00 1207 reject_low 13 ALIGNMENT 0 YS2-6o04.p1k vc_1 712 62 2473 2472 C 651 0.00 1207 reject_low 12 ALIGNMENT 0 YS2-6o04.q1k vc_3 62 726 2531 2530 F 665 0.00 1338 reject_low 11 ALIGNMENT 0 YS2-6o04.p1k vc_1 712 62 2106 2105 C 651 0.00 1207 reject_low 3 ALIGNMENT 248 YS2-6o04.p1k vc_3 1044 713 1757 2105 C 332 92.77 1207 reject_low 5 ALIGNMENT 0 YS2-6o04.p1k chr05 894 696 282157 282156 C 199 0.00 1207 accept_chi 0 ALIGNMENT 35 YS2-6o04.q1k vc_3 725 688 2474 2511 C 38 97.37 1338 reject_low 16 ALIGNMENT 0 YS2-6o04.p1k vc_4 62 712 5871 5870 F 651 0.00 1207 reject_low 6 ALIGNMENT 46 YS2-6o05.q1k scplasm1 130 199 3714 3783 F 70 91.43 1274 manual 12 ALIGNMENT 0 YS2-6o05.q1k vc_4 62 265 126 125 F 204 0.00 1274 reject_vc 8 ALIGNMENT 0 YS2-6o05.q1k vc_4 265 62 5813 5812 C 204 0.00 1274 reject_vc 4 ALIGNMENT 0 YS2-6o05.q1k vc_4 431 353 1449 1448 C 79 0.00 1274 reject_vc 13 ALIGNMENT 354 YS2-6o05.q1k vc_7 764 266 2234 2727 C 499 91.18 1274 reject_vc 3 ALIGNMENT 0 YS2-6o05.q1k vc_3 431 267 2473 2472 C 165 0.00 1274 reject_vc 16 ALIGNMENT 187 YS2-6o05.p1k scplasm1 61 290 870 1099 F 230 94.78 308 accept_chi 0 ALIGNMENT 141 YS2-6o05.q1k vc_7 730 476 4922 5172 C 255 86.27 1274|0,1 reject_vc 9 ALIGNMENT 0 YS2-6o05.q1k vc_2 225 62 2146 2145 C 164 0.00 1274 reject_vc 15 ALIGNMENT 0 YS2-6o05.q1k vc_7 265 62 2728 2727 C 204 0.00 1274 reject_vc 3 ALIGNMENT 0 YS2-6o05.q1k vc_1 62 265 2531 2530 F 204 0.00 1274 reject_vc 5 ALIGNMENT 0 YS2-6o05.q1k vc_5 227 62 5064 5063 C 166 0.00 1274 reject_vc 17 ALIGNMENT 0 YS2-6o05.q1k vc_1 431 267 2473 2472 C 165 0.00 1274 reject_vc 14 ALIGNMENT 0 YS2-6o05.q1k vc_7 476 477 5172 6360 C 0 0.00 1274 reject_vc 9 ALIGNMENT 0 YS2-6o05.q1k scplasm1 62 129 3714 3713 F 68 0.00 1274 manual 12 ALIGNMENT 0 YS2-6o05.q1k vc_2 431 267 2106 2105 C 165 0.00 1274 reject_vc 15 ALIGNMENT 0 YS2-6o05.q1k vc_5 431 267 5026 5025 C 165 0.00 1274 reject_vc 17 ALIGNMENT 336 YS2-6o05.q1k vc_1 266 730 2531 2991 F 465 91.61 1274 reject_vc 5 ALIGNMENT 41 YS2-6o05.q1k vc_3 266 226 2472 2512 C 41 100.00 1274 reject_vc 16 ALIGNMENT 0 YS2-6o05.q1k vc_4 267 266 5872 6353 F 0 0.00 1274 reject_vc 10 ALIGNMENT 0 YS2-6o05.q1k vc_5 227 62 37 36 C 166 0.00 1274 reject_vc 20 ALIGNMENT 0 YS2-6o05.q1k scplasm1 431 200 871 870 C 232 0.00 1274 manual 1 ALIGNMENT 36 YS2-6o05.q1k vc_5 263 228 1 36 C 36 100.00 1274 reject_vc 20 ALIGNMENT 0 YS2-6o05.q1k vc_2 62 265 2164 2163 F 204 0.00 1274 reject_vc 6 ALIGNMENT 79 YS2-6o05.q1k vc_4 352 266 1448 1534 C 87 97.70 1274 reject_vc 13 ALIGNMENT 41 YS2-6o05.q1k vc_1 266 226 2472 2512 C 41 100.00 1274 reject_vc 14 ALIGNMENT 0 YS2-6o05.q1k vc_7 62 228 13525 13524 F 167 0.00 1274 reject_vc 19 ALIGNMENT 132 YS2-6o05.q1k scplasm1 199 15 870 1054 C 185 91.35 1274 manual 1 ALIGNMENT 336 YS2-6o05.q1k vc_2 266 730 2164 2624 F 465 91.61 1274 reject_vc 6 ALIGNMENT 147 YS2-6o05.q1k vc_4 266 427 126 287 F 162 97.53 1274 reject_vc 8 ALIGNMENT 0 YS2-6o05.p1k scplasm1 308 131 3715 3714 C 178 0.00 308 reject_low 11 ALIGNMENT 48 YS2-6o05.q1k vc_7 477 426 6360 6411 C 52 98.08 1274|1,0 reject_vc 9 ALIGNMENT 49 YS2-6o05.p1k scplasm1 130 61 3714 3783 C 70 92.86 308 reject_low 11 ALIGNMENT 0 YS2-6o05.q1k vc_3 225 62 2513 2512 C 164 0.00 1274 reject_vc 16 ALIGNMENT 147 YS2-6o05.q1k vc_4 266 427 6353 6514 F 162 97.53 1274|1,0 reject_vc 10 ALIGNMENT 0 YS2-6o05.q1k vc_7 62 228 63 62 F 167 0.00 1274 reject_vc 18 ALIGNMENT 0 YS2-6o05.q1k vc_7 425 62 6412 6411 C 364 0.00 1274 reject_vc 9 ALIGNMENT 0 YS2-6o05.q1k vc_4 265 62 1535 1534 C 204 0.00 1274 reject_vc 13 ALIGNMENT 0 YS2-6o05.q1k vc_5 62 265 2398 2397 F 204 0.00 1274 reject_vc 2 ALIGNMENT 39 YS2-6o05.q1k vc_5 266 228 5025 5063 C 39 100.00 1274 reject_vc 17 ALIGNMENT 0 YS2-6o05.q1k vc_4 62 225 5831 5830 F 164 0.00 1274 reject_vc 10 ALIGNMENT 0 YS2-6o05.q1k vc_3 62 265 2531 2530 F 204 0.00 1274 reject_vc 7 ALIGNMENT 38 YS2-6o05.q1k vc_7 229 266 63 100 F 38 100.00 1274 reject_vc 18 ALIGNMENT 0 YS2-6o05.p1k scplasm1 291 308 1099 1098 F 18 0.00 308 accept_chi 0 ALIGNMENT 0 YS2-6o05.q1k scplasm1 200 431 3783 3782 F 232 0.00 1274 manual 12 ALIGNMENT 0 YS2-6o05.q1k vc_7 267 431 13562 13561 F 165 0.00 1274 reject_vc 19 ALIGNMENT 0 YS2-6o05.q1k vc_1 225 62 2513 2512 C 164 0.00 1274 reject_vc 14 ALIGNMENT 38 YS2-6o05.q1k vc_7 229 266 13525 13562 F 38 100.00 1274 reject_vc 19 ALIGNMENT 41 YS2-6o05.q1k vc_2 266 226 2105 2145 C 41 100.00 1274 reject_vc 15 ALIGNMENT 0 YS2-6o05.q1k vc_7 267 431 100 99 F 165 0.00 1274 reject_vc 18 ALIGNMENT 347 YS2-6o05.q1k vc_4 764 266 5317 5812 C 499 90.78 1274 reject_vc 4 ALIGNMENT 0 YS2-6o05.q1k vc_5 431 264 2 1 C 168 0.00 1274 reject_vc 20 ALIGNMENT 336 YS2-6o05.q1k vc_3 266 730 2531 2991 F 465 91.61 1274 reject_vc 7 ALIGNMENT 354 YS2-6o05.q1k vc_5 266 764 2398 2891 F 499 91.18 1274 reject_vc 2 ALIGNMENT 41 YS2-6o05.q1k vc_4 226 266 5831 5871 F 41 100.00 1274 reject_vc 10 ALIGNMENT 530 YS2-6o06.p1k chr06 35 866 192495 193322 F 832 88.70 1283 accept 0 ALIGNMENT 347 YS2-6o08.q1k chr04 540 34 168561 169061 C 507 91.32 1466 accept 0 ALIGNMENT 740 YS2-6o08.p1k chr04 35 839 167489 168294 F 805 98.63 1367 accept 0 ALIGNMENT 636 YS2-6o09.q1k chr14 887 28 329758 330611 C 860 92.44 1344 accept 0 ALIGNMENT 930 YS2-6o09.p1k chr14 38 1089 325226 326279 F 1052 97.24 1272 accept 0 ALIGNMENT 967 YS2-6o11.p1k chr10 1158 34 682339 683471 C 1125 96.71 1303 accept 0 ALIGNMENT 730 YS2-6o11.q1k chr10 29 953 677530 678454 F 925 94.27 1272 accept 0 ALIGNMENT 505 YS2-6o12.p1k vc_2 714 1 1035 1749 C 714 91.18 816 reject_vc 3 ALIGNMENT 505 YS2-6o12.p1k vc_3 714 1 1035 1749 C 714 91.18 816 reject_vc 4 ALIGNMENT 508 YS2-6o12.p1k vc_5 714 1 3955 4669 C 714 91.32 816 reject_vc 0 ALIGNMENT 505 YS2-6o12.p1k vc_1 714 1 1035 1749 C 714 91.18 816 reject_vc 2 ALIGNMENT 499 YS2-6o12.p1k vc_7 1 714 456 1170 F 714 90.62 816 reject_vc 5 ALIGNMENT 499 YS2-6o12.p1k vc_7 1 714 13918 14632 F 714 90.62 816 reject_vc 6 ALIGNMENT 508 YS2-6o12.p1k vc_6 1 714 3712 4426 F 714 91.04 816 reject_vc 1 ALIGNMENT 550 YS2-6o13.q1k chr01 26 806 191885 192684 F 781 90.78 1365 accept 0 ALIGNMENT 855 YS2-6o13.p1k chr01 1027 34 195108 196104 C 994 95.88 1307 accept 0 ALIGNMENT 179 YS2-6o14.q1k vc_7 729 363 2366 2727 C 367 84.74 1335 reject_low 6 ALIGNMENT 37 YS2-6o14.q1k vc_5 361 325 5027 5063 C 37 100.00 1335 reject_low 13 ALIGNMENT 119 YS2-6o14.q1k vc_4 363 526 126 287 F 164 92.07 1335 reject_low 7 ALIGNMENT 0 YS2-6o14.q1k vc_4 362 92 1535 1534 C 271 0.00 1335 reject_low 9 ALIGNMENT 79 YS2-6o14.q1k vc_4 451 363 1446 1534 C 89 96.63 1335 reject_low 9 ALIGNMENT 0 YS2-6o14.q1k vc_1 323 92 2512 2511 C 232 0.00 1335 reject_low 10 ALIGNMENT 0 YS2-6o14.q1k vc_7 92 325 13525 13524 F 234 0.00 1335 reject_low 14 ALIGNMENT 0 YS2-6o14.q1k vc_4 362 362 5870 6352 F 1 0.00 1335 reject_low 8 ALIGNMENT 0 YS2-6o14.q1k vc_4 362 92 5813 5812 C 271 0.00 1335 reject_low 1 ALIGNMENT 0 YS2-6o14.q1k vc_2 92 362 2164 2163 F 271 0.00 1335 reject_low 3 ALIGNMENT 38 YS2-6o14.q1k vc_3 361 324 2474 2511 C 38 100.00 1335 reject_low 12 ALIGNMENT 0 YS2-6o14.q1k vc_4 92 362 126 125 F 271 0.00 1335 reject_low 7 ALIGNMENT 179 YS2-6o14.q1k vc_5 363 729 2398 2759 F 367 84.74 1335 reject_low 5 ALIGNMENT 38 YS2-6o14.q1k vc_1 361 324 2474 2511 C 38 100.00 1335 reject_low 10 ALIGNMENT 0 YS2-6o14.q1k vc_3 323 92 2512 2511 C 232 0.00 1335 reject_low 12 ALIGNMENT 38 YS2-6o14.q1k vc_4 324 361 5832 5869 F 38 100.00 1335 reject_low 8 ALIGNMENT 0 YS2-6o14.q1k vc_3 92 362 2531 2530 F 271 0.00 1335 reject_low 4 ALIGNMENT 38 YS2-6o14.q1k vc_2 361 324 2107 2144 C 38 100.00 1335 reject_low 11 ALIGNMENT 0 YS2-6o14.q1k vc_1 92 362 2531 2530 F 271 0.00 1335 reject_low 2 ALIGNMENT 0 YS2-6o14.q1k vc_2 323 92 2145 2144 C 232 0.00 1335 reject_low 11 ALIGNMENT 0 YS2-6o14.q1k vc_5 324 92 5064 5063 C 233 0.00 1335 reject_low 13 ALIGNMENT 0 YS2-6o14.q1k vc_4 92 323 5832 5831 F 232 0.00 1335 reject_low 8 ALIGNMENT 179 YS2-6o14.q1k vc_3 363 729 2531 2892 F 367 84.74 1335 reject_low 4 ALIGNMENT 0 YS2-6o14.q1k vc_5 92 362 2398 2397 F 271 0.00 1335 reject_low 5 ALIGNMENT 180 YS2-6o14.q1k vc_4 729 363 5449 5812 C 367 84.74 1335 reject_low 1 ALIGNMENT 172 YS2-6o14.q1k chr05 39 320 561514 561796 F 282 90.78 1335 accept_tel 0 ALIGNMENT 0 YS2-6o14.q1k vc_7 362 92 2728 2727 C 271 0.00 1335 reject_low 6 ALIGNMENT 36 YS2-6o14.q1k vc_5 360 325 1 36 C 36 100.00 1335 reject_low 15 ALIGNMENT 0 YS2-6o14.q1k vc_5 324 92 37 36 C 233 0.00 1335 reject_low 15 ALIGNMENT 0 YS2-6o14.q1k chr05 321 359 561796 561795 F 39 0.00 1335 accept_tel 0 ALIGNMENT 179 YS2-6o14.q1k vc_2 363 729 2164 2525 F 367 84.74 1335 reject_low 3 ALIGNMENT 179 YS2-6o14.q1k vc_1 363 729 2531 2892 F 367 84.74 1335 reject_low 2 ALIGNMENT 36 YS2-6o14.q1k vc_7 326 361 13525 13560 F 36 100.00 1335 reject_low 14 ALIGNMENT 119 YS2-6o14.q1k vc_4 363 526 6353 6514 F 164 92.07 1335 reject_low 8 ALIGNMENT 907 YS2-6o15.p1k chr04 1105 34 48894 49980 C 1072 96.08 1309 accept 0 ALIGNMENT 713 YS2-6o15.q1k chr04 35 904 48097 48963 F 870 95.06 1327 accept 0 ALIGNMENT 935 YS2-6o16.p1k chr08 1189 33 441720 442893 C 1157 94.73 1347 accept 0 ALIGNMENT 724 YS2-6o16.q1k chr08 27 999 437875 438839 F 973 93.01 1319 accept 0 ALIGNMENT 880 YS2-6o17.p1k chr10 31 1145 599903 601008 F 1115 95.16 1260 accept 0 ALIGNMENT 574 YS2-6o17.q1k chr10 1009 40 603583 604548 C 970 87.53 1324 accept 0 ALIGNMENT 0 YS2-6o19.p1k vc_3 739 62 2473 2472 C 678 0.00 1319 reject_low 18 ALIGNMENT 0 YS2-6o19.p1k vc_1 739 62 2106 2105 C 678 0.00 1319 reject_low 4 ALIGNMENT 26 YS2-6o19.p1k vc_1 770 740 2441 2472 C 31 96.77 1319 reject_low 17 ALIGNMENT 0 YS2-6o19.q1k vc_2 62 776 2170 2169 F 715 0.00 1273 reject_low 13 ALIGNMENT 26 YS2-6o19.p1k vc_3 770 740 2441 2472 C 31 96.77 1319 reject_low 18 ALIGNMENT 663 YS2-6o19.p1k chr12 32 721 911802 912492 F 690 99.86 1319 accept_chi 0 ALIGNMENT 271 YS2-6o19.p1k vc_2 1145 740 1712 2105 C 406 90.89 1319 reject_low 5 ALIGNMENT 0 YS2-6o19.q1k vc_4 62 776 132 131 F 715 0.00 1273 reject_low 15 ALIGNMENT 0 YS2-6o19.q1k vc_1 62 776 2537 2536 F 715 0.00 1273 reject_low 12 ALIGNMENT 630 YS2-6o19.q1k chr12 730 33 911798 912492 C 698 98.14 1273 accept_chi 1 ALIGNMENT 271 YS2-6o19.p1k vc_3 1145 740 1712 2105 C 406 90.89 1319 reject_low 6 ALIGNMENT 53 YS2-6o19.q1k vc_4 777 930 132 278 F 154 81.17 1273 reject_low 15 ALIGNMENT 32 YS2-6o19.q1k vc_1 771 730 2472 2513 C 42 92.86 1273 reject_low 10 ALIGNMENT 0 YS2-6o19.q1k vc_4 772 776 5872 6358 F 5 0.00 1273 reject_low 9 ALIGNMENT 0 YS2-6o19.q1k vc_4 776 62 5807 5806 C 715 0.00 1273 reject_low 14 ALIGNMENT 52 YS2-6o19.q1k vc_4 993 777 5603 5806 C 217 79.26 1273 reject_low 14 ALIGNMENT 0 YS2-6o19.p1k vc_1 825 771 2442 2441 C 55 0.00 1319 reject_low 17 ALIGNMENT 0 YS2-6o19.p1k vc_3 739 62 2106 2105 C 678 0.00 1319 reject_low 6 ALIGNMENT 0 YS2-6o19.p1k vc_3 825 771 2442 2441 C 55 0.00 1319 reject_low 18 ALIGNMENT 271 YS2-6o19.p1k vc_1 1145 740 1712 2105 C 406 90.89 1319 reject_low 4 ALIGNMENT 272 YS2-6o19.p1k vc_7 740 1145 100 493 F 406 90.89 1319 reject_low 2 ALIGNMENT 271 YS2-6o19.p1k vc_5 1145 740 4632 5025 C 406 90.89 1319 reject_low 7 ALIGNMENT 0 YS2-6o19.p1k chr12 722 825 912492 912491 F 104 0.00 1319 accept_chi 0 ALIGNMENT 43 YS2-6o19.q1k vc_4 861 777 1447 1528 C 85 85.88 1273 reject_low 16 ALIGNMENT 0 YS2-6o19.p1k vc_7 62 739 13562 13561 F 678 0.00 1319 reject_low 3 ALIGNMENT 0 YS2-6o19.p1k vc_1 739 62 2473 2472 C 678 0.00 1319 reject_low 17 ALIGNMENT 0 YS2-6o19.p1k vc_2 739 62 2106 2105 C 678 0.00 1319 reject_low 5 ALIGNMENT 0 YS2-6o19.q1k vc_4 776 62 1529 1528 C 715 0.00 1273 reject_low 16 ALIGNMENT 52 YS2-6o19.q1k vc_2 777 993 2170 2373 F 217 79.26 1273 reject_low 13 ALIGNMENT 0 YS2-6o19.q1k vc_1 729 62 2514 2513 C 668 0.00 1273 reject_low 10 ALIGNMENT 0 YS2-6o19.q1k vc_2 729 62 2147 2146 C 668 0.00 1273 reject_low 11 ALIGNMENT 0 YS2-6o19.q1k vc_4 62 729 5830 5829 F 668 0.00 1273 reject_low 9 ALIGNMENT 272 YS2-6o19.p1k vc_7 740 1145 13562 13955 F 406 90.89 1319 reject_low 3 ALIGNMENT 32 YS2-6o19.q1k vc_4 730 771 5830 5871 F 42 92.86 1273 reject_low 9 ALIGNMENT 53 YS2-6o19.q1k vc_4 777 930 6359 6505 F 154 81.17 1273 reject_low 9 ALIGNMENT 0 YS2-6o19.p1k vc_5 739 62 5026 5025 C 678 0.00 1319 reject_low 7 ALIGNMENT 0 YS2-6o19.p1k vc_4 62 739 5871 5870 F 678 0.00 1319 reject_low 8 ALIGNMENT 32 YS2-6o19.q1k vc_2 771 730 2105 2146 C 42 92.86 1273 reject_low 11 ALIGNMENT 265 YS2-6o19.p1k vc_4 740 1063 5871 6191 F 324 94.44 1319 reject_low 8 ALIGNMENT 52 YS2-6o19.q1k vc_1 777 993 2537 2740 F 217 79.26 1273 reject_low 12 ALIGNMENT 0 YS2-6o19.p1k vc_7 62 739 100 99 F 678 0.00 1319 reject_low 2 ALIGNMENT 944 YS2-6o20.p1k chr04 31 1166 218700 219832 F 1136 95.69 1291 accept 0 ALIGNMENT 662 YS2-6o20.q1k chr04 834 1 222316 223149 C 834 94.36 1296 accept 0 ALIGNMENT 604 YS2-6o22.q1k chr04 1057 35 1087330 1088341 C 1023 87.98 1236 accept 0 ALIGNMENT 464 YS2-6o22.q1k chr08 777 35 229361 230102 C 743 88.29 1236 reject_low 1 ALIGNMENT 866 YS2-6o22.p1k chr04 38 1097 1083611 1084673 F 1060 94.91 1260 accept 0 ALIGNMENT 26 YS2-6o23.q1k chrm 124 168 16427 16470 F 45 93.33 542|5,0 accept_chi 1 ALIGNMENT 0 YS2-6o23.p1k chrm 453 454 13982 16430 C 0 0.00 571 accept_chi 0 ALIGNMENT 0 YS2-6o23.p1k chrm 412 413 16471 18953 C 0 0.00 571 accept_chi 0 ALIGNMENT 0 YS2-6o23.p1k chrm 376 377 18990 20505 C 0 0.00 571 accept_chi 0 ALIGNMENT 93 YS2-6o23.q1k chrm 27 132 13882 13986 F 106 98.11 542|0,4 accept_chi 1 ALIGNMENT 30 YS2-6o23.q1k chrm 169 206 18954 18991 F 38 94.74 542|0,1 accept_chi 1 ALIGNMENT 0 YS2-6o23.q1k chrm 206 205 18991 20506 F 0 0.00 542 accept_chi 1 ALIGNMENT 0 YS2-6o23.q1k chrm 129 128 13983 16431 F 0 0.00 542 accept_chi 1 ALIGNMENT 26 YS2-6o23.p1k chrm 457 413 16427 16470 C 45 93.33 571|4,0 accept_chi 0 ALIGNMENT 30 YS2-6o23.p1k chrm 412 375 18954 18991 C 38 94.74 571|0,2 accept_chi 0 ALIGNMENT 0 YS2-6o23.q1k chrm 169 168 16471 18953 F 0 0.00 542 accept_chi 1 ALIGNMENT 302 YS2-6o23.q1k chrm 204 542 20505 20843 F 339 98.23 542|2,0 accept_chi 1 ALIGNMENT 97 YS2-6o23.p1k chrm 553 449 13882 13986 C 105 99.05 571|0,5 accept_chi 0 ALIGNMENT 0 YS2-6o23.p1k chrm 571 554 13883 13882 C 18 0.00 571 accept_chi 0 ALIGNMENT 299 YS2-6o23.p1k chrm 377 44 20505 20838 C 334 98.50 571|1,0 accept_chi 0 ALIGNMENT 512 YS2-6o24.q1k chr15 736 8 426381 427107 C 729 91.77 1157 accept 0 ALIGNMENT 855 YS2-6o24.p1k chr15 70 1025 424227 425167 F 956 97.70 1250 accept 0 ALIGNMENT 446 YS2-6p01.p1k chr06 35 486 174150 174601 F 452 100.00 505 accept_chi 0 ALIGNMENT 446 YS2-6p01.q1k chr06 484 33 174150 174601 C 452 100.00 484 accept_chi 1 ALIGNMENT 0 YS2-6p01.p1k chr06 487 505 174601 174600 F 19 0.00 505 accept_chi 0 ALIGNMENT 220 YS2-6p02.q1k vc_2 1 304 2322 2623 F 304 91.78 1118 reject_vc 4 ALIGNMENT 0 YS2-6p02.q1k vc_7 309 305 4698 4922 C 5 0.00 1118 reject_low 6 ALIGNMENT 37 YS2-6p02.q1k vc_7 428 310 4584 4697 C 119 80.67 1118 reject_low 6 ALIGNMENT 220 YS2-6p02.q1k vc_1 1 304 2689 2990 F 304 91.78 1118 reject_vc 3 ALIGNMENT 174 YS2-6p02.q1k vc_7 304 53 4923 5172 C 252 90.87 1118 reject_low 6 ALIGNMENT 253 YS2-6p02.q1k vc_5 1 428 2556 2975 F 428 88.08 1118 reject_vc 0 ALIGNMENT 246 YS2-6p02.q1k vc_4 428 1 5233 5654 C 428 87.62 1118 reject_vc 2 ALIGNMENT 36 YS2-6p02.q1k vc_4 311 428 1879 1991 F 118 80.51 1118 reject_low 7 ALIGNMENT 253 YS2-6p02.q1k vc_7 428 1 2150 2569 C 428 88.08 1118 reject_vc 1 ALIGNMENT 220 YS2-6p02.q1k vc_3 1 304 2689 2990 F 304 91.78 1118 reject_vc 5 ALIGNMENT 48 YS2-6p04.q1k vc_7 54 3 6360 6411 C 52 98.08 809|1,0 reject_vc 7 ALIGNMENT 329 YS2-6p04.q1k vc_7 510 1 2073 2569 C 510 90.00 809 reject_vc 2 ALIGNMENT 0 YS2-6p04.q1k vc_4 62 237 1548 1547 F 176 0.00 809 reject_vc 8 ALIGNMENT 270 YS2-6p04.q1k vc_3 1 302 2689 2990 F 302 96.69 809 reject_vc 6 ALIGNMENT 48 YS2-6p04.q1k vc_4 302 238 6275 6339 C 65 92.31 809 reject_vc 10 ALIGNMENT 270 YS2-6p04.q1k vc_2 1 302 2322 2623 F 302 96.69 809 reject_vc 5 ALIGNMENT 48 YS2-6p04.q1k vc_4 238 302 1548 1612 F 65 92.31 809 reject_vc 8 ALIGNMENT 312 YS2-6p04.q1k vc_4 428 1 5232 5654 C 428 92.29 809 reject_vc 3 ALIGNMENT 0 YS2-6p04.q1k vc_4 237 62 6340 6339 C 176 0.00 809 reject_vc 10 ALIGNMENT 48 YS2-6p04.q1k vc_7 428 305 4583 4699 C 124 83.87 809 reject_vc 7 ALIGNMENT 0 YS2-6p04.q1k vc_7 53 54 5172 6360 C 0 0.00 809 reject_vc 7 ALIGNMENT 329 YS2-6p04.q1k vc_5 1 510 2556 3052 F 510 90.00 809 reject_vc 1 ALIGNMENT 250 YS2-6p04.p1k chr15 298 34 124896 125161 C 265 99.62 317 accept 0 ALIGNMENT 270 YS2-6p04.q1k vc_1 1 302 2689 2990 F 302 96.69 809 reject_vc 4 ALIGNMENT 48 YS2-6p04.q1k vc_4 302 238 48 112 C 65 92.31 809 reject_vc 9 ALIGNMENT 0 YS2-6p04.p1k chr15 317 299 124897 124896 C 19 0.00 317 accept 0 ALIGNMENT 219 YS2-6p04.q1k vc_7 302 53 4923 5172 C 250 96.00 809|0,1 reject_vc 7 ALIGNMENT 0 YS2-6p04.q1k vc_7 304 303 4700 4922 C 2 0.00 809 reject_vc 7 ALIGNMENT 0 YS2-6p04.q1k vc_4 237 62 113 112 C 176 0.00 809 reject_vc 9 ALIGNMENT 0 YS2-6p04.q1k vc_4 303 311 1613 1882 F 9 0.00 809 reject_vc 8 ALIGNMENT 57 YS2-6p04.q1k vc_4 312 510 1883 2068 F 199 80.90 809 reject_vc 8 ALIGNMENT 704 YS2-6p07.q1k chr16 34 1006 444345 445314 F 973 91.98 1570 accept 0 ALIGNMENT 887 YS2-6p07.p1k chr16 1022 30 447427 448432 C 993 97.38 1229 accept 0 ALIGNMENT 599 YS2-6p08.q1k chr08 25 864 60654 61494 F 840 91.90 1523 accept 0 ALIGNMENT 993 YS2-6p08.p1k chr08 1238 38 60866 62073 C 1201 95.25 1310 accept 0 ALIGNMENT 0 YS2-6p09.q1k vc_4 696 62 1534 1533 C 635 0.00 1403 reject_low 12 ALIGNMENT 31 YS2-6p09.q1k vc_3 695 656 2473 2512 C 40 92.50 1403 reject_low 10 ALIGNMENT 0 YS2-6p09.q1k vc_3 62 696 2532 2531 F 635 0.00 1403 reject_low 4 ALIGNMENT 95 YS2-6p09.q1k vc_4 697 853 127 284 F 157 87.26 1403 reject_low 7 ALIGNMENT 0 YS2-6p09.q1k vc_5 657 62 5064 5063 C 596 0.00 1403 reject_low 11 ALIGNMENT 31 YS2-6p09.q1k vc_1 695 656 2473 2512 C 40 92.50 1403 reject_low 9 ALIGNMENT 114 YS2-6p09.q1k vc_7 983 697 2443 2726 C 287 81.88 1403 reject_low 2 ALIGNMENT 0 YS2-6p09.q1k vc_7 696 62 2727 2726 C 635 0.00 1403 reject_low 2 ALIGNMENT 106 YS2-6p09.q1k vc_4 983 697 5526 5811 C 287 81.18 1403 reject_low 6 ALIGNMENT 113 YS2-6p09.q1k vc_5 697 983 2399 2682 F 287 81.88 1403 reject_low 5 ALIGNMENT 0 YS2-6p09.q1k vc_5 657 62 37 36 C 596 0.00 1403 reject_low 13 ALIGNMENT 95 YS2-6p09.q1k vc_4 697 853 6354 6511 F 157 87.26 1403 reject_low 8 ALIGNMENT 0 YS2-6p09.q1k vc_3 655 62 2513 2512 C 594 0.00 1403 reject_low 10 ALIGNMENT 0 YS2-6p09.q1k vc_4 62 696 127 126 F 635 0.00 1403 reject_low 7 ALIGNMENT 0 YS2-6p09.q1k vc_4 696 696 5871 6353 F 1 0.00 1403 reject_low 8 ALIGNMENT 0 YS2-6p09.q1k vc_4 696 62 5812 5811 C 635 0.00 1403 reject_low 6 ALIGNMENT 113 YS2-6p09.q1k vc_3 697 983 2532 2815 F 287 81.88 1403 reject_low 4 ALIGNMENT 27 YS2-6p09.q1k vc_5 690 658 4 36 C 33 93.94 1403 reject_low 13 ALIGNMENT 0 YS2-6p09.q1k vc_5 62 696 2399 2398 F 635 0.00 1403 reject_low 5 ALIGNMENT 586 YS2-6p09.q1k chr08 30 656 179955 180581 F 627 98.56 1403 accept_chi 1 ALIGNMENT 51 YS2-6p09.q1k vc_4 780 697 1450 1533 C 84 86.90 1403 reject_low 12 ALIGNMENT 31 YS2-6p09.q1k vc_4 656 695 5831 5870 F 40 92.50 1403 reject_low 8 ALIGNMENT 29 YS2-6p09.q1k vc_5 695 658 5026 5063 C 38 92.11 1403 reject_low 11 ALIGNMENT 609 YS2-6p09.p1k chr08 660 33 179954 180581 C 628 99.68 661 accept_chi 0 ALIGNMENT 0 YS2-6p09.q1k vc_1 655 62 2513 2512 C 594 0.00 1403 reject_low 9 ALIGNMENT 0 YS2-6p09.q1k vc_1 62 696 2532 2531 F 635 0.00 1403 reject_low 3 ALIGNMENT 0 YS2-6p09.q1k vc_4 62 655 5831 5830 F 594 0.00 1403 reject_low 8 ALIGNMENT 113 YS2-6p09.q1k vc_1 697 983 2532 2815 F 287 81.88 1403 reject_low 3 ALIGNMENT 753 YS2-6p10.q1k chr12 984 24 986442 987394 C 961 93.96 1418 accept 0 ALIGNMENT 1027 YS2-6p10.p1k chr12 37 1207 983447 984627 F 1171 97.01 1298 accept 0 ALIGNMENT 885 YS2-6p13.p1k chr11 1021 30 480073 481073 C 992 97.28 1295 accept 0 ALIGNMENT 640 YS2-6p13.q1k chr11 29 931 477347 478252 F 903 91.03 1281 accept 0 ALIGNMENT 981 YS2-6p15.p1k chr12 32 1130 453121 454234 F 1099 97.18 1303 accept 0 ALIGNMENT 981 YS2-6p15.p1k chr12 32 1130 462258 463371 F 1099 97.18 1303 accept 1 ALIGNMENT 719 YS2-6p15.q1k chr12 990 38 463956 464895 C 953 93.18 1336 accept 1 ALIGNMENT 719 YS2-6p15.q1k chr12 990 38 454819 455758 C 953 93.18 1336 accept 0 ALIGNMENT 346 YS2-6p17.q1k vc_4 421 1 5232 5654 C 421 94.30 1048 reject_low 2 ALIGNMENT 0 YS2-6p17.q1k vc_4 62 237 1548 1547 F 176 0.00 1048 reject_low 6 ALIGNMENT 264 YS2-6p17.q1k vc_1 1 302 2689 2990 F 302 96.03 1048 reject_low 3 ALIGNMENT 0 YS2-6p17.q1k vc_7 53 54 5172 6360 C 0 0.00 1048 reject_low 7 ALIGNMENT 213 YS2-6p17.q1k vc_7 302 53 4923 5172 C 250 95.20 1048|0,1 reject_low 7 ALIGNMENT 0 YS2-6p17.q1k vc_7 304 303 4700 4922 C 2 0.00 1048 reject_low 7 ALIGNMENT 0 YS2-6p17.q1k vc_4 237 62 113 112 C 176 0.00 1048 reject_low 8 ALIGNMENT 0 YS2-6p17.q1k vc_4 303 307 1613 1878 F 5 0.00 1048 reject_low 6 ALIGNMENT 401 YS2-6p17.q1k vc_5 1 598 2556 3139 F 598 90.80 1048 reject_vc 0 ALIGNMENT 264 YS2-6p17.q1k vc_3 1 302 2689 2990 F 302 96.03 1048 reject_low 5 ALIGNMENT 131 YS2-6p17.q1k vc_4 308 598 1879 2155 F 291 85.57 1048 reject_low 6 ALIGNMENT 87 YS2-6p17.q1k vc_7 421 305 4583 4699 C 117 92.31 1048 reject_low 7 ALIGNMENT 48 YS2-6p17.q1k vc_7 54 3 6360 6411 C 52 98.08 1048|1,0 reject_low 7 ALIGNMENT 264 YS2-6p17.q1k vc_2 1 302 2322 2623 F 302 96.03 1048 reject_low 4 ALIGNMENT 54 YS2-6p17.q1k vc_4 238 302 1548 1612 F 65 95.38 1048 reject_low 6 ALIGNMENT 0 YS2-6p17.q1k vc_4 237 62 6340 6339 C 176 0.00 1048 reject_low 9 ALIGNMENT 54 YS2-6p17.q1k vc_4 302 238 48 112 C 65 95.38 1048 reject_low 8 ALIGNMENT 399 YS2-6p17.q1k vc_7 557 1 2024 2569 C 557 92.10 1048 reject_vc 1 ALIGNMENT 54 YS2-6p17.q1k vc_4 302 238 6275 6339 C 65 95.38 1048 reject_low 9 ALIGNMENT 488 YS2-6p19.q1k chr08 46 741 309331 310029 F 696 91.24 1539 accept 0 ALIGNMENT 696 YS2-6p19.p1k chr08 1049 270 309335 310112 C 780 97.31 1280 accept 0 ALIGNMENT 917 YS2-6p20.p1k chr07 33 1125 502148 503249 F 1093 95.79 1243 accept 0 ALIGNMENT 691 YS2-6p20.q1k chr07 946 31 506491 507405 C 916 92.58 1256 accept 0 ALIGNMENT 26 YS2-6p22.q1k chr12 775 865 467859 467946 F 91 80.22 1215 reject_low 1 ALIGNMENT 26 YS2-6p22.q1k chr12 775 878 458722 458821 F 104 79.81 1215 reject_bad_break 0 ALIGNMENT 799 YS2-6p22.p1k chr12 887 71 451603 452418 C 817 99.76 1231 reject_low 2 ALIGNMENT 611 YS2-6p22.p1k chr12 703 71 489754 490386 C 633 99.05 1231 reject_low 3 ALIGNMENT 829 YS2-6p22.p1k chr12 1123 71 460479 461555 C 1053 94.21 1231 reject_bad_break 0 ALIGNMENT 0 YS2-6p22.p1k chr12 848 704 489755 489754 C 145 0.00 1231 reject_low 3 ALIGNMENT 0 YS2-6p22.q1k chr12 703 774 458682 458721 F 72 0.00 1215 reject_bad_break 0 ALIGNMENT 584 YS2-6p22.q1k chr12 1 702 467129 467818 F 702 95.73 1215 reject_low 1 ALIGNMENT 584 YS2-6p22.q1k chr12 1 702 457992 458681 F 702 95.73 1215 reject_bad_break 0 ALIGNMENT 0 YS2-6p22.q1k chr12 703 774 467819 467858 F 72 0.00 1215 reject_low 1 ALIGNMENT 361 YS2-6p23.q1k chr15 47 652 311199 311804 F 606 86.96 1308 accept 0 ALIGNMENT 885 YS2-6p23.p1k chr15 1073 70 315748 316766 C 1004 96.61 1209 accept 0 ALIGNMENT 200 YS2-6p24.p1k chr09 1040 605 221778 222208 C 436 83.49 1209 reject_low 1 ALIGNMENT 657 YS2-6p24.q1k chr05 846 31 323861 324676 C 816 95.22 1266 accept 0 ALIGNMENT 955 YS2-6p24.p1k chr05 41 1163 322397 323500 F 1123 96.88 1209 accept 0 ALIGNMENT 0 YS2-6p24.p1k chr09 604 77 222209 222208 C 528 0.00 1209 reject_low 1 ALIGNMENT 1006 YS2-7a02.p1k chr02 1168 32 795264 796409 C 1137 96.57 1298 accept 0 ALIGNMENT 1033 YS2-7a02.q1k chr02 36 1226 791837 793031 F 1191 97.31 1301 accept 0 ALIGNMENT 82 YS2-7a03.p1k chr13 639 542 372438 372536 C 98 94.90 1272 reject_low 2 ALIGNMENT 0 YS2-7a03.p1k chr08 884 640 85289 85288 C 245 0.00 1272 reject_low 10 ALIGNMENT 76 YS2-7a03.p1k chr10 560 639 378276 378355 F 80 98.75 1272 reject_low 12 ALIGNMENT 1013 YS2-7a03.q1k chr07 1148 42 826135 827243 C 1107 98.37 1322 accept 0 ALIGNMENT 0 YS2-7a03.p1k chr07 408 884 811451 811450 F 477 0.00 1272 reject_low 1 ALIGNMENT 0 YS2-7a03.p1k chr07 884 634 412298 412297 C 251 0.00 1272 reject_low 13 ALIGNMENT 572 YS2-7a03.p1k chr07 402 1115 823329 824056 F 714 95.24 1272 accept 0 ALIGNMENT 0 YS2-7a03.p1k chr05 62 558 469451 469450 F 497 0.00 1272 reject_low 7 ALIGNMENT 0 YS2-7a03.p1k chr07 556 62 73905 73904 C 495 0.00 1272 reject_low 4 ALIGNMENT 0 YS2-7a03.p1k chr12 884 640 687856 687855 C 245 0.00 1272 reject_low 8 ALIGNMENT 0 YS2-7a03.p1k chr05 640 884 469531 469530 F 245 0.00 1272 reject_low 7 ALIGNMENT 77 YS2-7a03.p1k chr08 639 559 85288 85368 C 81 98.77 1272 reject_low 10 ALIGNMENT 0 YS2-7a03.p1k chr07 558 62 412372 412371 C 497 0.00 1272 reject_low 13 ALIGNMENT 0 YS2-7a03.p1k chr15 556 62 663889 663888 C 495 0.00 1272 reject_low 6 ALIGNMENT 0 YS2-7a03.p1k chr11 634 884 379396 379395 F 251 0.00 1272 reject_low 14 ALIGNMENT 76 YS2-7a03.p1k chr05 560 639 438696 438775 F 80 98.75 1272 reject_low 11 ALIGNMENT 80 YS2-7a03.p1k chr05 559 639 469451 469531 F 81 100.00 1272 reject_low 7 ALIGNMENT 0 YS2-7a03.p1k chr15 884 639 663808 663807 C 246 0.00 1272 reject_low 6 ALIGNMENT 348 YS2-7a03.p1k chr07 33 407 811077 811451 F 375 98.67 1272 reject_low 1 ALIGNMENT 0 YS2-7a03.p1k chr05 62 559 438696 438695 F 498 0.00 1272 reject_low 11 ALIGNMENT 79 YS2-7a03.p1k chr13 638 560 420582 420660 C 79 100.00 1272 reject_low 9 ALIGNMENT 0 YS2-7a03.p1k chr13 541 62 372537 372536 C 480 0.00 1272 reject_low 2 ALIGNMENT 0 YS2-7a03.p1k chr13 558 62 586710 586709 C 497 0.00 1272 reject_low 3 ALIGNMENT 0 YS2-7a03.p1k chr13 884 639 420583 420582 C 246 0.00 1272 reject_low 9 ALIGNMENT 0 YS2-7a03.p1k chr11 62 559 379323 379322 F 498 0.00 1272 reject_low 14 ALIGNMENT 79 YS2-7a03.p1k chr11 639 557 307783 307865 C 83 98.80 1272 reject_low 5 ALIGNMENT 0 YS2-7a03.p1k chr10 640 884 378355 378354 F 245 0.00 1272 reject_low 12 ALIGNMENT 79 YS2-7a03.p1k chr07 639 557 73822 73904 C 83 98.80 1272 reject_low 4 ALIGNMENT 0 YS2-7a03.p1k chr11 556 62 307866 307865 C 495 0.00 1272 reject_low 5 ALIGNMENT 74 YS2-7a03.p1k chr11 560 633 379323 379396 F 74 100.00 1272 reject_low 14 ALIGNMENT 82 YS2-7a03.p1k chr13 644 559 586623 586709 C 86 98.84 1272 reject_low 3 ALIGNMENT 0 YS2-7a03.p1k chr05 640 884 438775 438774 F 245 0.00 1272 reject_low 11 ALIGNMENT 0 YS2-7a03.p1k chr10 62 559 378276 378275 F 498 0.00 1272 reject_low 12 ALIGNMENT 0 YS2-7a03.p1k chr12 559 62 687935 687934 C 498 0.00 1272 reject_low 8 ALIGNMENT 79 YS2-7a03.p1k chr15 638 557 663807 663888 C 82 98.78 1272 reject_low 6 ALIGNMENT 75 YS2-7a03.p1k chr07 633 559 412297 412371 C 75 100.00 1272 reject_low 13 ALIGNMENT 0 YS2-7a03.p1k chr11 884 640 307784 307783 C 245 0.00 1272 reject_low 5 ALIGNMENT 0 YS2-7a03.p1k chr08 558 62 85369 85368 C 497 0.00 1272 reject_low 10 ALIGNMENT 0 YS2-7a03.p1k chr13 559 62 420661 420660 C 498 0.00 1272 reject_low 9 ALIGNMENT 0 YS2-7a03.p1k chr13 884 645 586624 586623 C 240 0.00 1272 reject_low 3 ALIGNMENT 0 YS2-7a03.p1k chr07 884 640 73823 73822 C 245 0.00 1272 reject_low 4 ALIGNMENT 79 YS2-7a03.p1k chr12 639 560 687855 687934 C 80 100.00 1272 reject_low 8 ALIGNMENT 0 YS2-7a03.p1k chr13 884 640 372439 372438 C 245 0.00 1272 reject_low 2 ALIGNMENT 0 YS2-7a03.p1k chr07 62 401 823329 823328 F 340 0.00 1272 accept 0 ALIGNMENT 0 YS2-7a04.q1k vc_1 212 62 2513 2512 C 151 0.00 253 reject_low 1 ALIGNMENT 36 YS2-7a04.q1k vc_5 250 215 1 36 C 36 100.00 253 reject_low 7 ALIGNMENT 41 YS2-7a04.q1k vc_4 213 253 5831 5871 F 41 100.00 253 reject_low 4 ALIGNMENT 41 YS2-7a04.q1k vc_3 253 213 2472 2512 C 41 100.00 253 reject_low 3 ALIGNMENT 165 YS2-7a04.q1k chr09 38 213 287540 287715 F 176 100.00 253 accept 0 ALIGNMENT 41 YS2-7a04.q1k vc_2 253 213 2105 2145 C 41 100.00 253 reject_low 2 ALIGNMENT 0 YS2-7a04.q1k vc_4 62 212 5831 5830 F 151 0.00 253 reject_low 4 ALIGNMENT 38 YS2-7a04.q1k vc_7 216 253 13525 13562 F 38 100.00 253 reject_low 6 ALIGNMENT 0 YS2-7a04.q1k vc_3 212 62 2513 2512 C 151 0.00 253 reject_low 3 ALIGNMENT 0 YS2-7a04.q1k vc_7 62 215 13525 13524 F 154 0.00 253 reject_low 6 ALIGNMENT 0 YS2-7a04.q1k vc_2 212 62 2146 2145 C 151 0.00 253 reject_low 2 ALIGNMENT 41 YS2-7a04.q1k vc_1 253 213 2472 2512 C 41 100.00 253 reject_low 1 ALIGNMENT 0 YS2-7a04.q1k vc_5 214 62 5064 5063 C 153 0.00 253 reject_low 5 ALIGNMENT 0 YS2-7a04.q1k vc_5 214 62 37 36 C 153 0.00 253 reject_low 7 ALIGNMENT 0 YS2-7a04.q1k chr09 214 253 287715 287714 F 40 0.00 253 accept 0 ALIGNMENT 39 YS2-7a04.q1k vc_5 253 215 5025 5063 C 39 100.00 253 reject_low 5 ALIGNMENT 969 YS2-7a05.p1k chr12 1080 35 461807 462859 C 1046 97.71 1289 accept 0 ALIGNMENT 969 YS2-7a05.p1k chr12 1080 35 452670 453722 C 1046 97.71 1289 reject_low 1 ALIGNMENT 796 YS2-7a05.q1k chr12 40 1187 467491 468607 F 1148 93.03 1381 reject_low 2 ALIGNMENT 796 YS2-7a05.q1k chr12 40 1187 458354 459470 F 1148 93.03 1381 accept 0 ALIGNMENT 994 YS2-7a07.p1k chr11 1214 30 304609 305804 C 1185 94.94 1317 accept 0 ALIGNMENT 971 YS2-7a07.q1k chr11 38 1157 303140 304271 F 1120 96.70 1317 accept 0 ALIGNMENT 0 YS2-7a08.p1k chr13 216 674 87071 87070 F 459 0.00 674 reject_low 6 ALIGNMENT 0 YS2-7a08.q1k chr10 162 708 470093 470092 F 547 0.00 708 reject_low 2 ALIGNMENT 0 YS2-7a08.p1k chr02 203 674 68351 68350 F 472 0.00 674 reject_low 10 ALIGNMENT 0 YS2-7a08.q1k chr13 708 595 86952 86951 C 114 0.00 708 reject_low 3 ALIGNMENT 0 YS2-7a08.q1k chr16 488 62 650543 650542 C 427 0.00 708 reject_low 8 ALIGNMENT 23 YS2-7a08.q1k chr02 559 488 68280 68351 C 72 95.83 708 reject_low 7 ALIGNMENT 20 YS2-7a08.p1k chr10 577 529 470045 470093 C 49 95.92 674 reject_low 5 ALIGNMENT 0 YS2-7a08.q1k chr02 487 62 68352 68351 C 426 0.00 708 reject_low 7 ALIGNMENT 20 YS2-7a08.p1k chr16 126 201 650467 650542 F 76 93.42 674 reject_low 11 ALIGNMENT 0 YS2-7a08.q1k chr13 474 62 87072 87071 C 413 0.00 708 reject_low 3 ALIGNMENT 0 YS2-7a08.p1k chr16 202 674 650542 650541 F 473 0.00 674 reject_low 11 ALIGNMENT 0 YS2-7a08.q1k chr02 708 560 68281 68280 C 149 0.00 708 reject_low 7 ALIGNMENT 0 YS2-7a08.p1k chr13 62 95 86951 86950 F 34 0.00 674 reject_low 6 ALIGNMENT 22 YS2-7a08.p1k chr06 576 529 186206 186253 C 48 97.92 674 reject_low 4 ALIGNMENT 0 YS2-7a08.p1k chr10 674 578 470046 470045 C 97 0.00 674 reject_low 5 ALIGNMENT 0 YS2-7a08.p1k chr10 528 62 470094 470093 C 467 0.00 674 reject_low 5 ALIGNMENT 0 YS2-7a08.q1k chr16 708 565 650468 650467 C 144 0.00 708 reject_low 8 ALIGNMENT 24 YS2-7a08.p1k chr13 96 215 86951 87071 F 120 89.17 674 reject_low 6 ALIGNMENT 0 YS2-7a08.q1k chr10 62 112 470045 470044 F 51 0.00 708 reject_low 2 ALIGNMENT 0 YS2-7a08.q1k chrm 668 708 49898 49897 F 41 0.00 708 accept_chi 0 ALIGNMENT 0 YS2-7a08.p1k chr16 62 125 650467 650466 F 64 0.00 674 reject_low 11 ALIGNMENT 20 YS2-7a08.q1k chr16 564 489 650467 650542 C 76 93.42 708 reject_low 8 ALIGNMENT 20 YS2-7a08.q1k chr10 113 161 470045 470093 F 49 95.92 708 reject_low 2 ALIGNMENT 21 YS2-7a08.p1k chr04 99 201 778729 778830 F 103 89.32 674 reject_low 9 ALIGNMENT 334 YS2-7a08.p1k chrm 656 24 49289 49898 C 633 95.89 674 accept_chi 1 ALIGNMENT 338 YS2-7a08.q1k chrm 34 667 49289 49898 F 634 96.06 708 accept_chi 0 ALIGNMENT 0 YS2-7a08.p1k chrm 674 657 49290 49289 C 18 0.00 674 accept_chi 1 ALIGNMENT 0 YS2-7a08.p1k chr04 62 98 778729 778728 F 37 0.00 674 reject_low 9 ALIGNMENT 24 YS2-7a08.q1k chr13 594 475 86951 87071 C 120 89.17 708 reject_low 3 ALIGNMENT 0 YS2-7a08.p1k chr04 202 674 778830 778829 F 473 0.00 674 reject_low 9 ALIGNMENT 23 YS2-7a08.p1k chr02 131 202 68280 68351 F 72 95.83 674 reject_low 10 ALIGNMENT 0 YS2-7a08.p1k chr02 62 130 68280 68279 F 69 0.00 674 reject_low 10 ALIGNMENT 0 YS2-7a08.p1k chr06 528 62 186254 186253 C 467 0.00 674 reject_low 4 ALIGNMENT 0 YS2-7a08.p1k chr06 674 577 186207 186206 C 98 0.00 674 reject_low 4 ALIGNMENT 989 YS2-7a10.p1k chr13 27 1135 683413 684523 F 1109 96.93 1387 accept 0 ALIGNMENT 899 YS2-7a10.q1k chr13 1039 38 687176 688194 C 1002 97.70 1289 accept 0 ALIGNMENT 38 YS2-7a11.q1k vc_7 478 515 13525 13562 F 38 100.00 515 reject_low 7 ALIGNMENT 431 YS2-7a11.p1k chr12 31 475 457647 458092 F 445 99.55 493 accept 0 ALIGNMENT 42 YS2-7a11.q1k vc_4 474 515 5830 5871 F 42 100.00 515 reject_low 5 ALIGNMENT 0 YS2-7a11.q1k vc_1 473 62 2514 2513 C 412 0.00 515 reject_low 3 ALIGNMENT 0 YS2-7a11.q1k chr12 515 475 457648 457647 C 41 0.00 515 reject_low 1 ALIGNMENT 0 YS2-7a11.q1k vc_4 62 473 5830 5829 F 412 0.00 515 reject_low 5 ALIGNMENT 0 YS2-7a11.p1k chr12 476 493 458092 458091 F 18 0.00 493 accept 0 ALIGNMENT 434 YS2-7a11.q1k chr12 474 30 457647 458092 C 445 99.78 515 reject_low 1 ALIGNMENT 0 YS2-7a11.q1k vc_5 476 62 37 36 C 415 0.00 515 reject_low 8 ALIGNMENT 0 YS2-7a11.q1k vc_7 62 477 13525 13524 F 416 0.00 515 reject_low 7 ALIGNMENT 431 YS2-7a11.p1k chr12 31 475 466784 467229 F 445 99.55 493 reject_low 2 ALIGNMENT 39 YS2-7a11.q1k vc_5 515 477 5025 5063 C 39 100.00 515 reject_low 6 ALIGNMENT 0 YS2-7a11.q1k vc_3 473 62 2514 2513 C 412 0.00 515 reject_low 4 ALIGNMENT 0 YS2-7a11.q1k chr12 515 475 466785 466784 C 41 0.00 515 accept 0 ALIGNMENT 434 YS2-7a11.q1k chr12 474 30 466784 467229 C 445 99.78 515 accept 0 ALIGNMENT 42 YS2-7a11.q1k vc_1 515 474 2472 2513 C 42 100.00 515 reject_low 3 ALIGNMENT 42 YS2-7a11.q1k vc_3 515 474 2472 2513 C 42 100.00 515 reject_low 4 ALIGNMENT 0 YS2-7a11.q1k vc_5 476 62 5064 5063 C 415 0.00 515 reject_low 6 ALIGNMENT 0 YS2-7a11.p1k chr12 476 493 467229 467228 F 18 0.00 493 reject_low 2 ALIGNMENT 36 YS2-7a11.q1k vc_5 512 477 1 36 C 36 100.00 515 reject_low 8 ALIGNMENT 0 YS2-7a12.q1k chr14 777 940 344629 344628 F 164 0.00 1296 reject_low 1 ALIGNMENT 0 YS2-7a12.q1k chr14 62 532 344386 344385 F 471 0.00 1296 reject_low 1 ALIGNMENT 950 YS2-7a12.q1k chr05 1122 39 405007 406109 C 1084 96.77 1296 accept 0 ALIGNMENT 899 YS2-7a12.p1k chr05 29 1059 402119 403168 F 1031 96.80 1304 accept 0 ALIGNMENT 88 YS2-7a12.q1k chr14 533 776 344386 344629 F 244 79.51 1296 reject_low 1 ALIGNMENT 0 YS2-7a13.q1k chr12 761 927 490543 490542 F 167 0.00 1349 reject_low 2 ALIGNMENT 1062 YS2-7a13.q1k chr12 30 1283 460982 462238 F 1254 95.85 1349 accept 1 ALIGNMENT 976 YS2-7a13.p1k chr12 1130 33 456633 457742 C 1098 97.36 1296 accept 0 ALIGNMENT 1062 YS2-7a13.q1k chr12 30 1283 451845 453101 F 1254 95.85 1349 accept 0 ALIGNMENT 704 YS2-7a13.q1k chr12 30 760 489813 490543 F 731 98.91 1349 reject_low 2 ALIGNMENT 976 YS2-7a13.p1k chr12 1130 33 465770 466879 C 1098 97.36 1296 accept 1 ALIGNMENT 0 YS2-7a14.q1k chr05 569 879 431774 431773 F 311 0.00 1303 reject_low 15 ALIGNMENT 0 YS2-7a14.q1k chr05 500 530 443629 443647 F 31 0.00 1303 reject_low 16 ALIGNMENT 0 YS2-7a14.q1k chr12 500 530 476211 476229 F 31 0.00 1303 reject_low 17 ALIGNMENT 33 YS2-7a14.q1k chr08 345 437 358751 358841 F 93 82.80 1303 reject_low 8 ALIGNMENT 22 YS2-7a14.q1k chr06 568 531 143579 143616 C 38 86.84 1303 reject_low 3 ALIGNMENT 0 YS2-7a14.q1k chr12 344 62 688627 688626 C 283 0.00 1303 reject_low 9 ALIGNMENT 0 YS2-7a14.q1k chr06 530 62 143617 143616 C 469 0.00 1303 reject_low 3 ALIGNMENT 21 YS2-7a14.q1k chr12 504 345 688470 688626 C 160 76.25 1303 reject_low 9 ALIGNMENT 0 YS2-7a14.q1k chr04 344 62 987049 987048 C 283 0.00 1303 reject_low 18 ALIGNMENT 0 YS2-7a14.q1k chr06 879 569 143580 143579 C 311 0.00 1303 reject_low 3 ALIGNMENT 0 YS2-7a14.q1k chr14 530 62 519246 519245 C 469 0.00 1303 reject_low 4 ALIGNMENT 0 YS2-7a14.q1k chr14 62 530 726865 726864 F 469 0.00 1303 reject_low 5 ALIGNMENT 999 YS2-7a14.p1k chr05 1166 59 288744 289857 C 1108 97.92 1343 accept 0 ALIGNMENT 0 YS2-7a14.q1k chr14 879 569 519209 519208 C 311 0.00 1303 reject_low 4 ALIGNMENT 22 YS2-7a14.q1k chr14 531 568 726865 726902 F 38 86.84 1303 reject_low 5 ALIGNMENT 0 YS2-7a14.q1k chr07 388 879 111295 111294 F 492 0.00 1303 reject_low 13 ALIGNMENT 0 YS2-7a14.q1k chr04 879 569 986837 986836 C 311 0.00 1303 reject_low 18 ALIGNMENT 0 YS2-7a14.q1k chr05 62 344 443470 443469 F 283 0.00 1303 reject_low 16 ALIGNMENT 21 YS2-7a14.q1k chr05 326 499 431545 431717 F 174 76.44 1303 reject_low 15 ALIGNMENT 0 YS2-7a14.q1k chr04 490 879 434641 434640 F 390 0.00 1303 reject_low 7 ALIGNMENT 22 YS2-7a14.q1k chr04 568 531 986836 986873 C 38 86.84 1303 reject_low 18 ALIGNMENT 25 YS2-7a14.q1k chr15 345 397 2971 3023 F 53 83.02 1303 reject_low 12 ALIGNMENT 26 YS2-7a14.q1k chr07 438 345 876111 876206 C 94 79.79 1303 reject_low 10 ALIGNMENT 0 YS2-7a14.q1k chr05 530 62 449377 449376 C 469 0.00 1303 reject_low 2 ALIGNMENT 908 YS2-7a14.q1k chr05 39 1066 287486 288528 F 1028 97.76 1303 accept 0 ALIGNMENT 21 YS2-7a14.q1k chr07 345 387 111253 111295 F 43 83.72 1303 reject_low 13 ALIGNMENT 0 YS2-7a14.q1k chr14 569 879 726902 726901 F 311 0.00 1303 reject_low 5 ALIGNMENT 0 YS2-7a14.q1k chr08 62 344 358751 358750 F 283 0.00 1303 reject_low 8 ALIGNMENT 22 YS2-7a14.q1k chr12 531 569 476230 476268 F 39 87.18 1303 reject_low 17 ALIGNMENT 0 YS2-7a14.q1k chr12 62 344 476052 476051 F 283 0.00 1303 reject_low 17 ALIGNMENT 22 YS2-7a14.q1k chr05 531 569 443648 443686 F 39 87.18 1303 reject_low 16 ALIGNMENT 0 YS2-7a14.q1k chr07 879 439 876112 876111 C 441 0.00 1303 reject_low 10 ALIGNMENT 0 YS2-7a14.q1k chr05 62 325 431545 431544 F 264 0.00 1303 reject_low 15 ALIGNMENT 0 YS2-7a14.q1k chr04 344 62 1352891 1352890 C 283 0.00 1303 reject_low 11 ALIGNMENT 0 YS2-7a14.q1k chr04 62 344 987221 987220 F 283 0.00 1303 reject_low 14 ALIGNMENT 0 YS2-7a14.q1k chr04 879 391 1352846 1352845 C 489 0.00 1303 reject_low 11 ALIGNMENT 0 YS2-7a14.q1k chr07 62 344 111253 111252 F 283 0.00 1303 reject_low 13 ALIGNMENT 0 YS2-7a14.q1k chr05 570 879 443686 443685 F 310 0.00 1303 reject_low 16 ALIGNMENT 0 YS2-7a14.q1k chr15 398 879 3023 3022 F 482 0.00 1303 reject_low 12 ALIGNMENT 0 YS2-7a14.q1k chr12 570 879 476268 476267 F 310 0.00 1303 reject_low 17 ALIGNMENT 20 YS2-7a14.q1k chr04 499 345 986893 987048 C 155 76.77 1303 reject_low 18 ALIGNMENT 0 YS2-7a14.q1k chr05 500 530 431718 431736 F 31 0.00 1303 reject_low 15 ALIGNMENT 20 YS2-7a14.q1k chr12 345 499 476052 476210 F 155 76.13 1303 reject_low 17 ALIGNMENT 27 YS2-7a14.q1k chr04 390 345 1352845 1352890 C 46 86.96 1303 reject_low 11 ALIGNMENT 0 YS2-7a14.q1k chr04 62 344 434496 434495 F 283 0.00 1303 reject_low 7 ALIGNMENT 0 YS2-7a14.q1k chr07 344 62 876207 876206 C 283 0.00 1303 reject_low 10 ALIGNMENT 46 YS2-7a14.q1k chr11 345 489 313323 313468 F 145 81.38 1303 reject_low 6 ALIGNMENT 0 YS2-7a14.q1k chr11 62 344 313323 313322 F 283 0.00 1303 reject_low 6 ALIGNMENT 0 YS2-7a14.q1k chr08 438 879 358841 358840 F 442 0.00 1303 reject_low 8 ALIGNMENT 22 YS2-7a14.q1k chr05 568 531 449339 449376 C 38 86.84 1303 reject_low 2 ALIGNMENT 0 YS2-7a14.q1k chr04 368 879 987243 987242 F 512 0.00 1303 reject_low 14 ALIGNMENT 22 YS2-7a14.q1k chr05 531 568 431737 431774 F 38 86.84 1303 reject_low 15 ALIGNMENT 0 YS2-7a14.q1k chr12 879 505 688471 688470 C 375 0.00 1303 reject_low 9 ALIGNMENT 0 YS2-7a14.q1k chr11 490 879 313468 313467 F 390 0.00 1303 reject_low 6 ALIGNMENT 0 YS2-7a14.q1k chr15 62 344 2971 2970 F 283 0.00 1303 reject_low 12 ALIGNMENT 0 YS2-7a14.p1k chr06 902 242 117252 117251 C 661 0.00 1343 reject_low 1 ALIGNMENT 0 YS2-7a14.q1k chr05 879 569 449340 449339 C 311 0.00 1303 reject_low 2 ALIGNMENT 0 YS2-7a14.q1k chr04 530 500 986874 986892 C 31 0.00 1303 reject_low 18 ALIGNMENT 22 YS2-7a14.q1k chr14 568 531 519208 519245 C 38 86.84 1303 reject_low 4 ALIGNMENT 117 YS2-7a14.p1k chr06 241 59 117251 117433 C 183 89.62 1343 reject_low 1 ALIGNMENT 20 YS2-7a14.q1k chr05 345 499 443470 443628 F 155 76.13 1303 reject_low 16 ALIGNMENT 43 YS2-7a14.q1k chr04 345 489 434496 434641 F 145 80.69 1303 reject_low 7 ALIGNMENT 20 YS2-7a14.q1k chr04 345 367 987221 987243 F 23 95.65 1303 reject_low 14 ALIGNMENT 929 YS2-7a16.p1k chr16 1101 29 884106 885196 C 1073 96.92 1269 accept 0 ALIGNMENT 0 YS2-7a16.q1k chr04 892 205 945950 945949 C 688 0.00 1284 reject_low 15 ALIGNMENT 144 YS2-7a16.q1k chr11 205 38 202289 202456 C 168 96.43 1284 reject_low 6 ALIGNMENT 0 YS2-7a16.q1k chr09 206 892 210645 210644 F 687 0.00 1284 reject_low 5 ALIGNMENT 861 YS2-7a16.q1k chr16 38 1156 880556 881687 F 1119 94.55 1284 accept 0 ALIGNMENT 136 YS2-7a16.q1k chr04 204 38 645235 645401 C 167 95.21 1284 reject_low 19 ALIGNMENT 0 YS2-7a16.q1k chr05 892 205 249930 249929 C 688 0.00 1284 reject_low 16 ALIGNMENT 0 YS2-7a16.q1k chr09 205 892 205556 205555 F 688 0.00 1284 reject_low 11 ALIGNMENT 140 YS2-7a16.q1k chr02 38 204 197891 198057 F 167 96.41 1284 reject_low 13 ALIGNMENT 139 YS2-7a16.q1k chr04 204 38 945949 946115 C 167 95.81 1284 reject_low 15 ALIGNMENT 139 YS2-7a16.q1k chr07 38 204 736161 736327 F 167 95.81 1284 reject_low 17 ALIGNMENT 0 YS2-7a16.q1k chr08 892 205 146325 146324 C 688 0.00 1284 reject_low 14 ALIGNMENT 0 YS2-7a16.q1k chr05 892 207 434626 434625 C 686 0.00 1284 reject_low 2 ALIGNMENT 0 YS2-7a16.q1k chr07 892 205 319427 319426 C 688 0.00 1284 reject_low 20 ALIGNMENT 144 YS2-7a16.q1k chr07 38 205 712383 712550 F 168 96.43 1284 reject_low 4 ALIGNMENT 0 YS2-7a16.q1k chr02 205 892 198057 198056 F 688 0.00 1284 reject_low 13 ALIGNMENT 142 YS2-7a16.q1k chr05 204 38 492434 492600 C 167 96.41 1284 reject_low 9 ALIGNMENT 0 YS2-7a16.q1k chr05 892 205 492435 492434 C 688 0.00 1284 reject_low 9 ALIGNMENT 0 YS2-7a16.q1k chr07 206 892 712550 712549 F 687 0.00 1284 reject_low 4 ALIGNMENT 0 YS2-7a16.q1k chr04 206 892 668432 668431 F 687 0.00 1284 reject_low 3 ALIGNMENT 143 YS2-7a16.q1k chr14 38 204 546912 547078 F 167 97.01 1284 reject_low 7 ALIGNMENT 144 YS2-7a16.q1k chr04 38 205 668265 668432 F 168 96.43 1284 reject_low 3 ALIGNMENT 142 YS2-7a16.q1k chr07 38 204 707372 707538 F 167 96.41 1284 reject_low 10 ALIGNMENT 0 YS2-7a16.q1k chr01 205 892 182953 182952 F 688 0.00 1284 reject_low 8 ALIGNMENT 0 YS2-7a16.q1k chr15 206 892 854613 854612 F 687 0.00 1284 reject_low 1 ALIGNMENT 142 YS2-7a16.q1k chr16 38 204 856715 856881 F 167 96.41 1284 reject_low 12 ALIGNMENT 139 YS2-7a16.q1k chr05 204 38 249929 250095 C 167 95.81 1284 reject_low 16 ALIGNMENT 0 YS2-7a16.q1k chr11 892 206 202290 202289 C 687 0.00 1284 reject_low 6 ALIGNMENT 140 YS2-7a16.q1k chr08 204 38 146324 146490 C 167 96.41 1284 reject_low 14 ALIGNMENT 142 YS2-7a16.q1k chr01 38 204 182787 182953 F 167 96.41 1284 reject_low 8 ALIGNMENT 0 YS2-7a16.q1k chr04 892 205 645236 645235 C 688 0.00 1284 reject_low 19 ALIGNMENT 148 YS2-7a16.q1k chr15 38 205 854447 854613 F 168 97.02 1284 reject_low 1 ALIGNMENT 142 YS2-7a16.q1k chr09 38 204 205390 205556 F 167 96.41 1284 reject_low 11 ALIGNMENT 0 YS2-7a16.q1k chr14 205 892 726575 726574 F 688 0.00 1284 reject_low 18 ALIGNMENT 145 YS2-7a16.q1k chr05 206 38 434625 434793 C 169 96.45 1284 reject_low 2 ALIGNMENT 144 YS2-7a16.q1k chr09 38 205 210478 210645 F 168 96.43 1284 reject_low 5 ALIGNMENT 136 YS2-7a16.q1k chr07 204 38 319426 319592 C 167 95.21 1284 reject_low 20 ALIGNMENT 0 YS2-7a16.q1k chr07 205 892 736327 736326 F 688 0.00 1284 reject_low 17 ALIGNMENT 139 YS2-7a16.q1k chr14 38 204 726409 726575 F 167 95.81 1284 reject_low 18 ALIGNMENT 0 YS2-7a16.q1k chr16 205 892 856881 856880 F 688 0.00 1284 reject_low 12 ALIGNMENT 0 YS2-7a16.q1k chr07 205 892 707538 707537 F 688 0.00 1284 reject_low 10 ALIGNMENT 0 YS2-7a16.q1k chr14 205 892 547078 547077 F 688 0.00 1284 reject_low 7 ALIGNMENT 28 YS2-7a18.q1k chr15 350 386 236280 236316 F 37 100.00 1317 reject_low 1 ALIGNMENT 0 YS2-7a18.q1k chr02 901 388 464113 464112 C 514 0.00 1317 reject_low 2 ALIGNMENT 0 YS2-7a18.q1k chr15 62 349 236280 236279 F 288 0.00 1317 reject_low 1 ALIGNMENT 25 YS2-7a18.q1k chr02 387 350 464112 464149 C 38 97.37 1317 reject_low 2 ALIGNMENT 940 YS2-7a18.q1k chr16 1185 30 461989 463150 C 1156 94.72 1317 accept 0 ALIGNMENT 936 YS2-7a18.p1k chr16 29 1085 457271 458329 F 1057 96.59 1363 accept 0 ALIGNMENT 0 YS2-7a18.q1k chr02 62 348 65930 65929 F 287 0.00 1317 reject_low 3 ALIGNMENT 0 YS2-7a18.q1k chr02 349 62 464150 464149 C 288 0.00 1317 reject_low 2 ALIGNMENT 22 YS2-7a18.q1k chr02 349 389 65930 65970 F 41 92.68 1317 reject_low 3 ALIGNMENT 0 YS2-7a18.q1k chr02 390 901 65970 65969 F 512 0.00 1317 reject_low 3 ALIGNMENT 0 YS2-7a18.q1k chr15 387 901 236316 236315 F 515 0.00 1317 reject_low 1 ALIGNMENT 0 YS2-7a19.q1k vc_5 217 62 37 36 C 156 0.00 256 reject_low 7 ALIGNMENT 0 YS2-7a19.q1k vc_5 217 62 5064 5063 C 156 0.00 256 reject_low 5 ALIGNMENT 0 YS2-7a19.q1k vc_3 216 62 2512 2511 C 155 0.00 256 reject_low 3 ALIGNMENT 0 YS2-7a19.q1k vc_7 62 218 13525 13524 F 157 0.00 256 reject_low 6 ALIGNMENT 38 YS2-7a19.q1k vc_7 219 256 13525 13562 F 38 100.00 256 reject_low 6 ALIGNMENT 166 YS2-7a19.p1k chr14 55 241 110664 110850 F 187 97.33 259 accept_chi 1 ALIGNMENT 0 YS2-7a19.q1k chr14 256 217 110665 110664 C 40 0.00 256 accept_chi 0 ALIGNMENT 0 YS2-7a19.q1k vc_4 62 216 5832 5831 F 155 0.00 256 reject_low 4 ALIGNMENT 0 YS2-7a19.q1k vc_1 216 62 2512 2511 C 155 0.00 256 reject_low 2 ALIGNMENT 175 YS2-7a19.q1k chr14 216 30 110664 110850 C 187 98.93 256 accept_chi 0 ALIGNMENT 36 YS2-7a19.q1k vc_5 253 218 1 36 C 36 100.00 256 reject_low 7 ALIGNMENT 40 YS2-7a19.q1k vc_3 256 217 2472 2511 C 40 100.00 256 reject_low 3 ALIGNMENT 40 YS2-7a19.q1k vc_1 256 217 2472 2511 C 40 100.00 256 reject_low 2 ALIGNMENT 40 YS2-7a19.q1k vc_4 217 256 5832 5871 F 40 100.00 256 reject_low 4 ALIGNMENT 39 YS2-7a19.q1k vc_5 256 218 5025 5063 C 39 100.00 256 reject_low 5 ALIGNMENT 0 YS2-7a19.p1k chr14 242 259 110850 110849 F 18 0.00 259 accept_chi 1 ALIGNMENT 1031 YS2-7a20.q1k chr15 41 1272 942206 943443 F 1232 95.13 1317 accept 0 ALIGNMENT 1025 YS2-7a20.p1k chr15 1192 28 942556 943732 C 1165 96.39 1305 accept 0 ALIGNMENT 959 YS2-7a21.q1k chr13 1253 40 130512 131722 C 1214 93.90 1298 accept_chi 0 ALIGNMENT 860 YS2-7a21.p1k chr14 1099 34 690989 692055 C 1066 94.65 1156 accept_chi 1 ALIGNMENT 496 YS2-7a22.p1k vc_6 552 29 5263 5787 C 524 99.62 1270 reject_low 1 ALIGNMENT 0 YS2-7a22.p1k vc_6 912 553 5264 5263 C 360 0.00 1270 reject_low 1 ALIGNMENT 761 YS2-7a22.q1k scplasm1 40 1118 1318 2407 F 1079 90.82 1287 accept 0 ALIGNMENT 980 YS2-7a22.p1k scplasm1 1145 29 4970 6094 C 1117 97.05 1270 accept 0 ALIGNMENT 0 YS2-7a23.q1k chr13 478 62 87072 87071 C 417 0.00 712 reject_low 1 ALIGNMENT 20 YS2-7a23.q1k chr16 568 493 650467 650542 C 76 93.42 712 reject_low 5 ALIGNMENT 0 YS2-7a23.q1k chr02 491 62 68352 68351 C 430 0.00 712 reject_low 4 ALIGNMENT 20 YS2-7a23.q1k chr10 117 165 470045 470093 F 49 95.92 712 reject_low 3 ALIGNMENT 22 YS2-7a23.q1k chr06 118 165 186206 186253 F 48 97.92 712 reject_low 2 ALIGNMENT 0 YS2-7a23.q1k chr06 166 712 186253 186252 F 547 0.00 712 reject_low 2 ALIGNMENT 0 YS2-7a23.q1k chr02 712 564 68281 68280 C 149 0.00 712 reject_low 4 ALIGNMENT 0 YS2-7a23.q1k chrm 672 712 49898 49897 F 41 0.00 712 accept 0 ALIGNMENT 0 YS2-7a23.q1k chr06 62 117 186206 186205 F 56 0.00 712 reject_low 2 ALIGNMENT 24 YS2-7a23.q1k chr13 598 479 86951 87071 C 120 89.17 712 reject_low 1 ALIGNMENT 23 YS2-7a23.q1k chr02 563 492 68280 68351 C 72 95.83 712 reject_low 4 ALIGNMENT 0 YS2-7a23.q1k chr10 62 116 470045 470044 F 55 0.00 712 reject_low 3 ALIGNMENT 0 YS2-7a23.q1k chr13 712 599 86952 86951 C 114 0.00 712 reject_low 1 ALIGNMENT 0 YS2-7a23.q1k chr16 712 569 650468 650467 C 144 0.00 712 reject_low 5 ALIGNMENT 338 YS2-7a23.q1k chrm 38 671 49289 49898 F 634 96.06 712 accept 0 ALIGNMENT 0 YS2-7a23.q1k chr10 166 712 470093 470092 F 547 0.00 712 reject_low 3 ALIGNMENT 0 YS2-7a23.q1k chr16 492 62 650543 650542 C 431 0.00 712 reject_low 5 ALIGNMENT 284 YS2-7a24.q1k scplasm1 191 944 1497 2247 F 754 80.24 1294 accept 0 ALIGNMENT 962 YS2-7b01.q1k chr12 1202 41 745614 746762 C 1162 96.04 1318 accept 0 ALIGNMENT 996 YS2-7b01.p1k chr12 34 1137 745082 746191 F 1104 97.74 1319 accept 0 ALIGNMENT 0 YS2-7b03.q1k chr03 115 878 127787 127786 F 764 0.00 1308 reject_low 9 ALIGNMENT 0 YS2-7b03.q1k chr14 122 878 632682 632681 F 757 0.00 1308 reject_low 2 ALIGNMENT 0 YS2-7b03.q1k chr07 120 878 731221 731220 F 759 0.00 1308 reject_low 8 ALIGNMENT 77 YS2-7b03.q1k chr14 40 122 102716 102798 F 83 97.59 1308 reject_low 5 ALIGNMENT 0 YS2-7b03.q1k chr14 123 878 102798 102797 F 756 0.00 1308 reject_low 5 ALIGNMENT 982 YS2-7b03.q1k chr16 38 1120 810670 811765 F 1083 97.88 1308 accept 0 ALIGNMENT 0 YS2-7b03.q1k chr06 878 136 137460 137459 C 743 0.00 1308 reject_low 1 ALIGNMENT 0 YS2-7b03.q1k chr15 121 878 228410 228409 F 758 0.00 1308 reject_low 7 ALIGNMENT 80 YS2-7b03.q1k chr06 135 40 137459 137554 C 96 94.79 1308 reject_low 1 ALIGNMENT 0 YS2-7b03.q1k chr15 124 878 487524 487523 F 755 0.00 1308 reject_low 3 ALIGNMENT 75 YS2-7b03.q1k chr03 40 114 127713 127787 F 75 100.00 1308 reject_low 9 ALIGNMENT 79 YS2-7b03.q1k chr14 40 121 632601 632682 F 82 98.78 1308 reject_low 2 ALIGNMENT 75 YS2-7b03.q1k chr11 40 123 74629 74712 F 84 96.43 1308 reject_low 6 ALIGNMENT 0 YS2-7b03.q1k chr11 124 878 74712 74711 F 755 0.00 1308 reject_low 6 ALIGNMENT 77 YS2-7b03.q1k chr07 40 119 731142 731221 F 80 98.75 1308 reject_low 8 ALIGNMENT 77 YS2-7b03.q1k chr12 122 40 975970 976052 C 83 97.59 1308 reject_low 4 ALIGNMENT 77 YS2-7b03.q1k chr15 40 120 228329 228410 F 81 98.77 1308 reject_low 7 ALIGNMENT 900 YS2-7b03.p1k chr16 1051 32 813706 814741 C 1020 97.45 1288 accept 0 ALIGNMENT 77 YS2-7b03.q1k chr15 40 123 487440 487524 F 84 97.62 1308 reject_low 3 ALIGNMENT 0 YS2-7b03.q1k chr12 878 123 975971 975970 C 756 0.00 1308 reject_low 4 ALIGNMENT 50 YS2-7b04.q1k scplasm1 91 40 4308 4359 C 52 100.00 124 accept_chi 1 ALIGNMENT 349 YS2-7b04.p1k scplasm1 520 32 939 1433 C 489 91.41 520 accept_chi 0 ALIGNMENT 898 YS2-7b07.p1k chr16 31 1031 457270 458282 F 1001 97.80 1309 accept 0 ALIGNMENT 25 YS2-7b07.q1k chr02 386 349 464112 464149 C 38 97.37 1343 reject_low 2 ALIGNMENT 926 YS2-7b07.q1k chr16 1166 33 462010 463146 C 1134 94.18 1343 accept 0 ALIGNMENT 0 YS2-7b07.q1k chr02 62 347 65930 65929 F 286 0.00 1343 reject_low 3 ALIGNMENT 0 YS2-7b07.q1k chr15 386 907 236316 236315 F 522 0.00 1343 reject_low 1 ALIGNMENT 28 YS2-7b07.q1k chr15 349 385 236280 236316 F 37 100.00 1343 reject_low 1 ALIGNMENT 0 YS2-7b07.q1k chr02 348 62 464150 464149 C 287 0.00 1343 reject_low 2 ALIGNMENT 22 YS2-7b07.q1k chr02 348 388 65930 65970 F 41 92.68 1343 reject_low 3 ALIGNMENT 0 YS2-7b07.q1k chr02 907 387 464113 464112 C 521 0.00 1343 reject_low 2 ALIGNMENT 0 YS2-7b07.q1k chr15 62 348 236280 236279 F 287 0.00 1343 reject_low 1 ALIGNMENT 0 YS2-7b07.q1k chr02 389 907 65970 65969 F 519 0.00 1343 reject_low 3 ALIGNMENT 1024 YS2-7b08.p1k chr07 38 1240 901479 902684 F 1203 95.59 1395 accept 0 ALIGNMENT 47 YS2-7b08.q1k chr07 85 38 902810 902857 C 48 100.00 112 accept 0 ALIGNMENT 305 YS2-7b09.p1k chr12 1 348 946797 947144 F 348 97.70 742 ambiguous_trans 7 ALIGNMENT 289 YS2-7b09.p1k chr04 20 348 1352634 1352962 F 329 97.87 742 ambiguous_trans_ua 13 ALIGNMENT 42 YS2-7b09.p1k chr10 170 53 537832 537948 C 118 81.36 742 ambiguous_trans_ua 32 ALIGNMENT 88 YS2-7b09.p1k chr03 320 20 124162 124462 C 301 80.07 742 ambiguous_trans_ua 26 ALIGNMENT 0 YS2-7b09.p1k chr04 176 62 987321 987320 C 115 0.00 742 ambiguous_trans 24 ALIGNMENT 286 YS2-7b09.p1k chr10 20 348 538017 538345 F 329 97.57 742 ambiguous_trans_ua 16 ALIGNMENT 0 YS2-7b09.p1k chr04 179 304 1353079 1353078 F 126 0.00 742 ambiguous_trans_ua 34 ALIGNMENT 308 YS2-7b09.p1k chr12 348 1 976257 976604 C 348 97.99 742 ambiguous_trans 4 ALIGNMENT 289 YS2-7b09.p1k chr04 20 348 981165 981493 F 329 97.87 742 ambiguous_trans 12 ALIGNMENT 285 YS2-7b09.p1k chr15 20 344 970282 970606 F 325 97.85 742 ambiguous_trans 18 ALIGNMENT 307 YS2-7b09.p1k chr15 1 347 975890 976236 F 347 97.98 742 ambiguous_trans 5 ALIGNMENT 0 YS2-7b09.p1k chr10 304 171 537833 537832 C 134 0.00 742 ambiguous_trans_ua 32 ALIGNMENT 278 YS2-7b09.p1k chr14 320 19 726646 726947 C 302 99.67 742 ambiguous_trans_ua 20 ALIGNMENT 305 YS2-7b09.p1k chr03 1 348 90418 90765 F 348 97.70 742 ambiguous_trans 6 ALIGNMENT 291 YS2-7b09.p1k chr07 1 338 817060 817397 F 338 97.34 742 ambiguous_trans 10 ALIGNMENT 60 YS2-7b09.p1k chr07 320 219 817429 817532 C 102 88.24 742 ambiguous_trans 30 ALIGNMENT 0 YS2-7b09.p1k chr16 62 170 62190 62189 F 109 0.00 742 ambiguous_trans 29 ALIGNMENT 65 YS2-7b09.p1k chr03 53 317 149513 149773 F 265 78.87 742 ambiguous_trans_ua 27 ALIGNMENT 0 YS2-7b09.p1k chr06 62 283 143869 143868 F 222 0.00 742 ambiguous_trans_ua 35 ALIGNMENT 24 YS2-7b09.p1k chr06 284 320 143869 143906 F 37 91.89 742 ambiguous_trans_ua 35 ALIGNMENT 0 YS2-7b09.p1k chr16 171 304 62826 62825 F 134 0.00 742 ambiguous_trans_ua 31 ALIGNMENT 0 YS2-7b09.p1k chr03 62 240 84626 84625 F 179 0.00 742 ambiguous_trans_ua 33 ALIGNMENT 196 YS2-7b09.p1k chr01 320 20 165858 166163 C 301 91.03 742 ambiguous_trans 23 ALIGNMENT 113 YS2-7b09.p1k chr04 320 177 987175 987320 C 144 95.83 742 ambiguous_trans 24 ALIGNMENT 289 YS2-7b09.p1k chr05 348 20 135611 135939 C 329 97.87 742 ambiguous_trans_ua 14 ALIGNMENT 92 YS2-7b09.p1k chr03 20 320 151518 151817 F 301 80.73 742 ambiguous_trans_ua 25 ALIGNMENT 60 YS2-7b09.p1k chr16 171 320 62190 62344 F 150 83.33 742 ambiguous_trans 29 ALIGNMENT 261 YS2-7b09.p1k chr03 320 19 168626 168929 C 302 98.01 742 ambiguous_trans_ua 21 ALIGNMENT 952 YS2-7b09.q1k chr08 1110 30 94971 96053 C 1081 96.11 1329 accept 0 ALIGNMENT 27 YS2-7b09.p1k chr04 60 178 1352962 1353079 F 119 78.15 742 ambiguous_trans_ua 34 ALIGNMENT 213 YS2-7b09.p1k chr01 320 1 160270 160594 C 320 91.56 742 ambiguous_trans 22 ALIGNMENT 284 YS2-7b09.p1k chr07 20 348 811452 811780 F 329 97.57 742 ambiguous_trans 17 ALIGNMENT 280 YS2-7b09.p1k chr03 20 348 84810 85138 F 329 96.96 742 ambiguous_trans 19 ALIGNMENT 0 YS2-7b09.p1k chr07 218 62 817533 817532 C 157 0.00 742 ambiguous_trans 30 ALIGNMENT 35 YS2-7b09.p1k chr03 241 317 84626 84704 F 77 84.42 742 ambiguous_trans_ua 33 ALIGNMENT 43 YS2-7b09.p1k chr16 71 170 62726 62826 F 100 84.00 742 ambiguous_trans_ua 31 ALIGNMENT 296 YS2-7b09.p1k chr14 346 1 562039 562384 C 346 97.11 742 ambiguous_trans_ua 9 ALIGNMENT 298 YS2-7b09.p1k chr04 347 1 513689 514035 C 347 97.12 742 ambiguous_trans 8 ALIGNMENT 303 YS2-7b09.p1k chr06 1 357 143516 143871 F 357 97.20 742 ambiguous_trans 1 ALIGNMENT 0 YS2-7b09.q1k chr15 262 815 105710 105709 F 554 0.00 1329 reject_low 11 ALIGNMENT 308 YS2-7b09.p1k chr04 1 348 986773 987120 F 348 97.99 742 ambiguous_trans 3 ALIGNMENT 311 YS2-7b09.p1k chr07 348 1 568748 569095 C 348 98.28 742 ambiguous_trans 2 ALIGNMENT 0 YS2-7b09.q1k chr15 62 219 105669 105668 F 158 0.00 1329 reject_low 11 ALIGNMENT 287 YS2-7b09.p1k chr16 19 348 62388 62717 F 330 97.58 742 ambiguous_trans_ua 15 ALIGNMENT 26 YS2-7b09.q1k chr15 220 261 105669 105710 F 42 88.10 1329 reject_low 11 ALIGNMENT 59 YS2-7b09.p1k chr03 295 20 142803 143077 C 276 77.17 742 ambiguous_trans_ua 28 ALIGNMENT 929 YS2-7b10.p1k chr07 1175 30 1063198 1064351 C 1146 95.03 1375 accept 0 ALIGNMENT 50 YS2-7b10.q1k chr07 25 75 1058082 1058132 F 51 100.00 96 accept 0 ALIGNMENT 41 YS2-7b11.q1k vc_3 262 222 2472 2512 C 41 100.00 262 reject_low 3 ALIGNMENT 41 YS2-7b11.q1k vc_1 262 222 2472 2512 C 41 100.00 262 reject_low 2 ALIGNMENT 176 YS2-7b11.q1k chr13 33 221 501371 501560 F 189 99.47 262 accept_chi 1 ALIGNMENT 41 YS2-7b11.q1k vc_4 222 262 5831 5871 F 41 100.00 262 reject_low 4 ALIGNMENT 0 YS2-7b11.q1k chr13 222 262 501560 501559 F 41 0.00 262 accept_chi 1 ALIGNMENT 0 YS2-7b11.p1k chr13 270 253 501367 501366 C 18 0.00 270 accept_chi 0 ALIGNMENT 0 YS2-7b11.q1k vc_5 223 62 5064 5063 C 162 0.00 262 reject_low 5 ALIGNMENT 0 YS2-7b11.q1k vc_4 62 221 5831 5830 F 160 0.00 262 reject_low 4 ALIGNMENT 0 YS2-7b11.q1k vc_1 221 62 2513 2512 C 160 0.00 262 reject_low 2 ALIGNMENT 0 YS2-7b11.q1k vc_7 62 224 13525 13524 F 163 0.00 262 reject_low 6 ALIGNMENT 0 YS2-7b11.q1k vc_3 221 62 2513 2512 C 160 0.00 262 reject_low 3 ALIGNMENT 179 YS2-7b11.p1k chr13 252 58 501366 501560 C 195 98.97 270 accept_chi 0 ALIGNMENT 36 YS2-7b11.q1k vc_5 259 224 1 36 C 36 100.00 262 reject_low 7 ALIGNMENT 38 YS2-7b11.q1k vc_7 225 262 13525 13562 F 38 100.00 262 reject_low 6 ALIGNMENT 39 YS2-7b11.q1k vc_5 262 224 5025 5063 C 39 100.00 262 reject_low 5 ALIGNMENT 0 YS2-7b11.q1k vc_5 223 62 37 36 C 162 0.00 262 reject_low 7 ALIGNMENT 50 YS2-7b12.q1k chr01 88 37 95417 95468 C 52 100.00 114 accept 0 ALIGNMENT 979 YS2-7b12.p1k chr01 30 1133 92754 93858 F 1104 95.56 1367 accept 0 ALIGNMENT 0 YS2-7b13.q1k vc_1 264 62 2512 2511 C 203 0.00 304 reject_low 2 ALIGNMENT 0 YS2-7b13.q1k vc_3 264 62 2512 2511 C 203 0.00 304 reject_low 4 ALIGNMENT 0 YS2-7b13.q1k chr01 265 304 134861 134860 F 40 0.00 304 accept_chi 0 ALIGNMENT 0 YS2-7b13.q1k vc_2 264 62 2145 2144 C 203 0.00 304 reject_low 3 ALIGNMENT 40 YS2-7b13.q1k vc_3 304 265 2472 2511 C 40 100.00 304 reject_low 4 ALIGNMENT 0 YS2-7b13.q1k vc_5 265 62 5064 5063 C 204 0.00 304 reject_low 6 ALIGNMENT 203 YS2-7b13.q1k chr01 40 264 134637 134861 F 225 98.22 304 accept_chi 0 ALIGNMENT 0 YS2-7b13.q1k vc_7 62 266 13525 13524 F 205 0.00 304 reject_low 7 ALIGNMENT 39 YS2-7b13.q1k vc_5 304 266 5025 5063 C 39 100.00 304 reject_low 6 ALIGNMENT 0 YS2-7b13.q1k vc_4 62 264 5832 5831 F 203 0.00 304 reject_low 5 ALIGNMENT 38 YS2-7b13.q1k vc_7 267 304 13525 13562 F 38 100.00 304 reject_low 7 ALIGNMENT 36 YS2-7b13.q1k vc_5 301 266 1 36 C 36 100.00 304 reject_low 8 ALIGNMENT 0 YS2-7b13.q1k vc_5 265 62 37 36 C 204 0.00 304 reject_low 8 ALIGNMENT 0 YS2-7b13.p1k chr01 268 251 134638 134637 C 18 0.00 268 accept_chi 1 ALIGNMENT 40 YS2-7b13.q1k vc_1 304 265 2472 2511 C 40 100.00 304 reject_low 2 ALIGNMENT 189 YS2-7b13.p1k chr01 250 26 134637 134861 C 225 96.89 268 accept_chi 1 ALIGNMENT 40 YS2-7b13.q1k vc_4 265 304 5832 5871 F 40 100.00 304 reject_low 5 ALIGNMENT 40 YS2-7b13.q1k vc_2 304 265 2105 2144 C 40 100.00 304 reject_low 3 ALIGNMENT 38 YS2-7b14.q1k chr14 40 93 542016 542067 F 54 92.59 114 accept 0 ALIGNMENT 920 YS2-7b14.p1k chr14 1112 30 545157 546231 C 1083 95.94 1389 accept 0 ALIGNMENT 41 YS2-7b15.q1k vc_1 268 228 2472 2512 C 41 100.00 268 reject_low 2 ALIGNMENT 39 YS2-7b15.q1k vc_5 268 230 5025 5063 C 39 100.00 268 reject_low 6 ALIGNMENT 0 YS2-7b15.p1k chr01 236 221 32468 32467 C 16 0.00 236 accept_chi 1 ALIGNMENT 41 YS2-7b15.q1k vc_4 228 268 5831 5871 F 41 100.00 268 reject_low 5 ALIGNMENT 41 YS2-7b15.q1k vc_3 268 228 2472 2512 C 41 100.00 268 reject_low 4 ALIGNMENT 171 YS2-7b15.p1k chr01 220 34 32467 32654 C 187 97.33 236 accept_chi 1 ALIGNMENT 36 YS2-7b15.q1k vc_5 265 230 1 36 C 36 100.00 268 reject_low 8 ALIGNMENT 0 YS2-7b15.q1k vc_3 227 62 2513 2512 C 166 0.00 268 reject_low 4 ALIGNMENT 0 YS2-7b15.q1k vc_7 62 230 13525 13524 F 169 0.00 268 reject_low 7 ALIGNMENT 0 YS2-7b15.q1k vc_1 227 62 2513 2512 C 166 0.00 268 reject_low 2 ALIGNMENT 41 YS2-7b15.q1k vc_2 268 228 2105 2145 C 41 100.00 268 reject_low 3 ALIGNMENT 0 YS2-7b15.q1k vc_4 62 227 5831 5830 F 166 0.00 268 reject_low 5 ALIGNMENT 38 YS2-7b15.q1k vc_7 231 268 13525 13562 F 38 100.00 268 reject_low 7 ALIGNMENT 0 YS2-7b15.q1k vc_5 229 62 5064 5063 C 168 0.00 268 reject_low 6 ALIGNMENT 0 YS2-7b15.q1k chr01 228 268 32658 32657 F 41 0.00 268 accept_chi 0 ALIGNMENT 179 YS2-7b15.q1k chr01 37 227 32468 32658 F 191 97.91 268 accept_chi 0 ALIGNMENT 0 YS2-7b15.q1k vc_5 229 62 37 36 C 168 0.00 268 reject_low 8 ALIGNMENT 0 YS2-7b15.q1k vc_2 227 62 2146 2145 C 166 0.00 268 reject_low 3 ALIGNMENT 1078 YS2-7b16.p1k chr12 41 1223 463001 464194 F 1183 97.46 1361 reject_low 1 ALIGNMENT 42 YS2-7b16.q1k chr12 80 28 458256 458306 C 53 96.23 108 accept 0 ALIGNMENT 1078 YS2-7b16.p1k chr12 41 1223 453864 455057 F 1183 97.46 1361 accept 0 ALIGNMENT 902 YS2-7b17.p1k chr02 1079 65 478041 479073 C 1015 97.04 1295 accept 0 ALIGNMENT 875 YS2-7b17.p1k chr16 1079 96 700968 701969 C 984 97.05 1295 reject_low 1 ALIGNMENT 993 YS2-7b17.q1k chr02 39 1221 473966 475147 F 1183 95.44 1332 accept 0 ALIGNMENT 0 YS2-7b18.p1k chr12 334 352 466089 466088 F 19 0.00 352 reject_low 1 ALIGNMENT 0 YS2-7b18.p1k chr12 334 352 456952 456951 F 19 0.00 352 accept 0 ALIGNMENT 293 YS2-7b18.p1k chr12 28 333 465783 466089 F 306 99.35 352 reject_low 1 ALIGNMENT 293 YS2-7b18.p1k chr12 28 333 456646 456952 F 306 99.35 352 accept 0 ALIGNMENT 41 YS2-7b18.q1k chr12 73 27 456905 456952 C 47 97.87 98 accept 0 ALIGNMENT 1010 YS2-7b19.q1k chr09 1237 40 261040 262245 C 1198 96.08 1303 accept 0 ALIGNMENT 1011 YS2-7b19.p1k chr09 65 1270 258806 260019 F 1206 95.27 1354 accept 0 ALIGNMENT 0 YS2-7b20.p1k chr13 272 661 289029 289028 F 390 0.00 1323 reject_low 5 ALIGNMENT 22 YS2-7b20.p1k chr08 1143 1075 291168 291236 C 69 79.71 1323 reject_low 1 ALIGNMENT 238 YS2-7b20.p1k chr08 1020 294 291292 292018 C 727 78.68 1323 reject_low 1 ALIGNMENT 154 YS2-7b20.p1k chr04 1017 259 1154587 1155345 C 759 74.84 1323 reject_low 2 ALIGNMENT 126 YS2-7b20.p1k chr04 1017 614 1163328 1163731 C 404 78.22 1323 reject_low 4 ALIGNMENT 0 YS2-7b20.p1k chr04 613 272 1163732 1163731 C 342 0.00 1323 reject_low 4 ALIGNMENT 828 YS2-7b20.p1k chr08 1273 236 294796 295835 C 1038 93.16 1323 accept 0 ALIGNMENT 45 YS2-7b20.q1k chr08 29 78 290449 290497 F 50 98.00 105 accept 0 ALIGNMENT 0 YS2-7b20.p1k chr08 293 272 292019 292018 C 22 0.00 1323 reject_low 1 ALIGNMENT 54 YS2-7b20.p1k chr13 662 1020 289029 289387 F 359 72.98 1323 reject_low 5 ALIGNMENT 154 YS2-7b20.p1k chr04 1017 259 1159979 1160737 C 759 74.84 1323 reject_low 3 ALIGNMENT 0 YS2-7b20.p1k chr08 1074 1021 291237 291291 C 54 0.00 1323 reject_low 1 ALIGNMENT 983 YS2-7b22.p1k chr12 1272 34 994161 995417 C 1239 94.67 1274 accept 0 ALIGNMENT 39 YS2-7b22.q1k chr12 29 69 991059 991099 F 41 100.00 95 accept 0 ALIGNMENT 1073 YS2-7b23.q1k chr13 1202 40 352355 353516 C 1163 97.76 1221 accept 0 ALIGNMENT 994 YS2-7b23.p1k chr13 30 1155 349130 350270 F 1126 96.98 1229 accept 0 ALIGNMENT 1053 YS2-7b24.p1k chr13 37 1261 350866 352093 F 1225 96.00 1261 accept 0 ALIGNMENT 42 YS2-7b24.q1k chr13 79 37 355695 355737 C 43 100.00 105 accept 0 ALIGNMENT 923 YS2-7c03.q1k chr09 1065 40 80276 81309 C 1026 98.05 1299 accept 0 ALIGNMENT 938 YS2-7c03.p1k chr09 33 1183 78827 79991 F 1151 96.09 1304 accept 0 ALIGNMENT 999 YS2-7c04.q1k chr13 32 1253 654442 655662 F 1222 94.35 1376 accept 0 ALIGNMENT 986 YS2-7c04.p1k chr13 1147 27 657042 658168 C 1121 95.45 1354 accept 0 ALIGNMENT 0 YS2-7c05.q1k vc_3 286 62 2513 2512 C 225 0.00 327 reject_low 4 ALIGNMENT 0 YS2-7c05.q1k vc_2 286 62 2146 2145 C 225 0.00 327 reject_low 3 ALIGNMENT 39 YS2-7c05.q1k vc_5 327 289 5025 5063 C 39 100.00 327 reject_low 6 ALIGNMENT 0 YS2-7c05.q1k chr09 327 287 202471 202470 C 41 0.00 327 accept_chi 0 ALIGNMENT 41 YS2-7c05.q1k vc_4 287 327 5831 5871 F 41 100.00 327 reject_low 5 ALIGNMENT 0 YS2-7c05.q1k vc_7 62 289 13525 13524 F 228 0.00 327 reject_low 7 ALIGNMENT 0 YS2-7c05.q1k vc_4 62 286 5831 5830 F 225 0.00 327 reject_low 5 ALIGNMENT 0 YS2-7c05.q1k vc_5 288 62 5064 5063 C 227 0.00 327 reject_low 6 ALIGNMENT 38 YS2-7c05.q1k vc_7 290 327 13525 13562 F 38 100.00 327 reject_low 7 ALIGNMENT 0 YS2-7c05.p1k chr09 281 298 202718 202717 F 18 0.00 298 accept_chi 1 ALIGNMENT 41 YS2-7c05.q1k vc_3 327 287 2472 2512 C 41 100.00 327 reject_low 4 ALIGNMENT 41 YS2-7c05.q1k vc_1 327 287 2472 2512 C 41 100.00 327 reject_low 2 ALIGNMENT 242 YS2-7c05.q1k chr09 286 38 202470 202718 C 249 99.60 327 accept_chi 0 ALIGNMENT 0 YS2-7c05.q1k vc_5 288 62 37 36 C 227 0.00 327 reject_low 8 ALIGNMENT 36 YS2-7c05.q1k vc_5 324 289 1 36 C 36 100.00 327 reject_low 8 ALIGNMENT 230 YS2-7c05.p1k chr09 33 280 202470 202718 F 248 98.39 298 accept_chi 1 ALIGNMENT 0 YS2-7c05.q1k vc_1 286 62 2513 2512 C 225 0.00 327 reject_low 2 ALIGNMENT 41 YS2-7c05.q1k vc_2 327 287 2105 2145 C 41 100.00 327 reject_low 3 ALIGNMENT 706 YS2-7c06.q1k chr09 765 30 31244 31979 C 736 99.32 766 accept_chi 0 ALIGNMENT 699 YS2-7c06.p1k chr09 38 771 31247 31979 F 734 99.18 772 accept_chi 1 ALIGNMENT 38 YS2-7c07.q1k vc_7 385 422 13525 13562 F 38 100.00 422 reject_low 5 ALIGNMENT 246 YS2-7c07.q1k chr11 38 380 489366 489726 F 343 93.00 422 accept_chi 0 ALIGNMENT 240 YS2-7c07.p1k chr11 374 32 489366 489726 C 343 92.42 392 accept_chi 1 ALIGNMENT 0 YS2-7c07.q1k vc_7 62 384 13525 13524 F 323 0.00 422 reject_low 5 ALIGNMENT 0 YS2-7c07.q1k vc_1 381 62 2513 2512 C 320 0.00 422 reject_low 2 ALIGNMENT 41 YS2-7c07.q1k vc_1 422 382 2472 2512 C 41 100.00 422 reject_low 2 ALIGNMENT 41 YS2-7c07.q1k vc_3 422 382 2472 2512 C 41 100.00 422 reject_low 3 ALIGNMENT 0 YS2-7c07.q1k vc_3 381 62 2513 2512 C 320 0.00 422 reject_low 3 ALIGNMENT 0 YS2-7c07.p1k chr11 392 375 489367 489366 C 18 0.00 392 accept_chi 1 ALIGNMENT 41 YS2-7c07.q1k vc_4 382 422 5831 5871 F 41 100.00 422 reject_low 4 ALIGNMENT 0 YS2-7c07.q1k chr11 381 422 489726 489725 F 42 0.00 422 accept_chi 0 ALIGNMENT 0 YS2-7c07.q1k vc_4 62 381 5831 5830 F 320 0.00 422 reject_low 4 ALIGNMENT 0 YS2-7c08.q1k chr10 62 207 400163 400162 F 146 0.00 1347 reject_low 4 ALIGNMENT 31 YS2-7c08.q1k chr11 233 277 220395 220439 F 45 91.11 1347 reject_low 1 ALIGNMENT 0 YS2-7c08.q1k chr11 62 178 220449 220448 F 117 0.00 1347 reject_low 2 ALIGNMENT 971 YS2-7c08.q1k chr11 36 1139 220254 221368 F 1104 97.19 1347 accept 0 ALIGNMENT 20 YS2-7c08.q1k chr10 208 235 400163 400190 F 28 96.43 1347 reject_low 4 ALIGNMENT 0 YS2-7c08.q1k chr10 236 881 400190 400189 F 646 0.00 1347 reject_low 4 ALIGNMENT 23 YS2-7c08.q1k chr10 204 235 400042 400073 F 32 96.88 1347 reject_low 3 ALIGNMENT 0 YS2-7c08.q1k chr11 224 881 220493 220492 F 658 0.00 1347 reject_low 2 ALIGNMENT 1022 YS2-7c08.p1k chr11 1224 29 220458 221662 C 1196 95.65 1407 accept 0 ALIGNMENT 0 YS2-7c08.q1k chr11 62 232 220395 220394 F 171 0.00 1347 reject_low 1 ALIGNMENT 30 YS2-7c08.q1k chr11 179 223 220449 220493 F 45 91.11 1347 reject_low 2 ALIGNMENT 0 YS2-7c08.q1k chr11 278 881 220439 220438 F 604 0.00 1347 reject_low 1 ALIGNMENT 0 YS2-7c08.q1k chr10 236 881 400073 400072 F 646 0.00 1347 reject_low 3 ALIGNMENT 0 YS2-7c08.q1k chr10 62 203 400042 400041 F 142 0.00 1347 reject_low 3 ALIGNMENT 0 YS2-7c09.q1k chr12 62 483 647458 647457 F 422 0.00 1458 reject_low 2 ALIGNMENT 0 YS2-7c09.q1k chr14 82 872 604266 604265 F 791 0.00 1458 reject_low 3 ALIGNMENT 971 YS2-7c09.p1k chr12 1139 24 648416 649543 C 1116 96.24 1290 accept 0 ALIGNMENT 22 YS2-7c09.q1k chr12 556 601 647386 647431 F 46 82.61 1458 reject_low 1 ALIGNMENT 0 YS2-7c09.q1k chr12 602 872 647431 647430 F 271 0.00 1458 reject_low 1 ALIGNMENT 21 YS2-7c09.q1k chr14 44 81 604229 604266 F 38 94.74 1458 reject_low 3 ALIGNMENT 21 YS2-7c09.q1k chr12 484 529 647458 647503 F 46 82.61 1458 reject_low 2 ALIGNMENT 1038 YS2-7c09.q1k chr12 40 1318 646942 648205 F 1279 94.84 1458 accept 0 ALIGNMENT 0 YS2-7c09.q1k chr12 62 555 647386 647385 F 494 0.00 1458 reject_low 1 ALIGNMENT 0 YS2-7c09.q1k chr12 530 872 647503 647502 F 343 0.00 1458 reject_low 2 ALIGNMENT 0 YS2-7c10.q1k vc_7 803 882 13562 13561 F 80 0.00 1392 reject_low 22 ALIGNMENT 0 YS2-7c10.p1k vc_4 62 764 5871 5870 F 703 0.00 1319 reject_low 8 ALIGNMENT 0 YS2-7c10.p1k vc_5 764 62 5026 5025 C 703 0.00 1319 reject_low 2 ALIGNMENT 0 YS2-7c10.q1k vc_3 882 803 2473 2472 C 80 0.00 1392 reject_low 19 ALIGNMENT 0 YS2-7c10.q1k chr10 882 769 172399 172398 C 114 0.00 1392 accept_chi 1 ALIGNMENT 671 YS2-7c10.p1k chr10 25 747 172402 173124 F 723 99.17 1319 accept_chi 0 ALIGNMENT 0 YS2-7c10.q1k vc_7 803 882 100 99 F 80 0.00 1392 reject_low 21 ALIGNMENT 0 YS2-7c10.q1k vc_7 962 62 6410 6409 C 901 0.00 1392 reject_low 16 ALIGNMENT 0 YS2-7c10.q1k vc_7 801 62 2728 2727 C 740 0.00 1392 reject_low 3 ALIGNMENT 0 YS2-7c10.p1k vc_7 62 764 13562 13561 F 703 0.00 1319 reject_low 7 ALIGNMENT 290 YS2-7c10.q1k vc_2 802 1188 2164 2553 F 387 93.02 1392 reject_low 11 ALIGNMENT 0 YS2-7c10.q1k vc_1 62 801 2531 2530 F 740 0.00 1392 reject_low 10 ALIGNMENT 40 YS2-7c10.q1k vc_3 802 763 2472 2511 C 40 100.00 1392 reject_low 19 ALIGNMENT 0 YS2-7c10.q1k vc_4 803 802 5872 6353 F 0 0.00 1392 reject_low 14 ALIGNMENT 0 YS2-7c10.p1k vc_3 764 62 2473 2472 C 703 0.00 1319 reject_low 25 ALIGNMENT 256 YS2-7c10.p1k vc_5 1108 765 4662 5025 C 344 93.31 1319 reject_low 2 ALIGNMENT 290 YS2-7c10.q1k vc_3 802 1188 2531 2920 F 387 93.02 1392 reject_low 12 ALIGNMENT 256 YS2-7c10.p1k vc_2 1108 765 1742 2105 C 344 93.31 1319 reject_low 5 ALIGNMENT 39 YS2-7c10.q1k vc_5 802 764 5025 5063 C 39 100.00 1392 reject_low 20 ALIGNMENT 287 YS2-7c10.q1k vc_4 1305 802 5296 5812 C 504 87.10 1392 reject_low 9 ALIGNMENT 256 YS2-7c10.p1k vc_7 765 1108 13562 13925 F 344 93.31 1319 reject_low 7 ALIGNMENT 0 YS2-7c10.q1k vc_4 62 801 126 125 F 740 0.00 1392 reject_low 13 ALIGNMENT 256 YS2-7c10.p1k vc_3 1108 765 1742 2105 C 344 93.31 1319 reject_low 6 ALIGNMENT 26 YS2-7c10.p1k vc_1 795 765 2441 2472 C 31 96.77 1319 reject_low 24 ALIGNMENT 101 YS2-7c10.q1k vc_7 1188 1010 4993 5172 C 179 87.15 1392|0,1 reject_low 16 ALIGNMENT 146 YS2-7c10.q1k vc_4 802 961 126 287 F 160 98.12 1392 reject_low 13 ALIGNMENT 0 YS2-7c10.q1k vc_7 62 764 13525 13524 F 703 0.00 1392 reject_low 22 ALIGNMENT 253 YS2-7c10.p1k vc_4 765 1097 5871 6221 F 333 93.69 1319 reject_low 8 ALIGNMENT 0 YS2-7c10.q1k vc_3 762 62 2512 2511 C 701 0.00 1392 reject_low 19 ALIGNMENT 0 YS2-7c10.p1k vc_3 854 796 2442 2441 C 59 0.00 1319 reject_low 25 ALIGNMENT 0 YS2-7c10.q1k vc_3 62 801 2531 2530 F 740 0.00 1392 reject_low 12 ALIGNMENT 0 YS2-7c10.p1k vc_3 764 62 2106 2105 C 703 0.00 1319 reject_low 6 ALIGNMENT 0 YS2-7c10.q1k vc_2 62 801 2164 2163 F 740 0.00 1392 reject_low 11 ALIGNMENT 0 YS2-7c10.q1k vc_4 62 762 5832 5831 F 701 0.00 1392 reject_low 14 ALIGNMENT 294 YS2-7c10.q1k vc_5 802 1305 2398 2912 F 504 88.10 1392 reject_low 2 ALIGNMENT 0 YS2-7c10.q1k vc_2 762 62 2145 2144 C 701 0.00 1392 reject_low 18 ALIGNMENT 671 YS2-7c10.q1k chr10 768 41 172398 173124 C 728 99.04 1392 accept_chi 1 ALIGNMENT 26 YS2-7c10.p1k vc_3 795 765 2441 2472 C 31 96.77 1319 reject_low 25 ALIGNMENT 294 YS2-7c10.q1k vc_7 1305 802 2213 2727 C 504 87.50 1392 reject_low 3 ALIGNMENT 0 YS2-7c10.p1k vc_1 854 796 2442 2441 C 59 0.00 1319 reject_low 24 ALIGNMENT 0 YS2-7c10.q1k vc_4 801 62 1535 1534 C 740 0.00 1392 reject_low 15 ALIGNMENT 146 YS2-7c10.q1k vc_4 802 961 6353 6514 F 160 98.12 1392|1,0 reject_low 14 ALIGNMENT 0 YS2-7c10.p1k vc_2 764 62 2106 2105 C 703 0.00 1319 reject_low 5 ALIGNMENT 40 YS2-7c10.q1k vc_1 802 763 2472 2511 C 40 100.00 1392 reject_low 17 ALIGNMENT 38 YS2-7c10.q1k vc_7 765 802 13525 13562 F 38 100.00 1392 reject_low 22 ALIGNMENT 0 YS2-7c10.q1k vc_1 762 62 2512 2511 C 701 0.00 1392 reject_low 17 ALIGNMENT 256 YS2-7c10.p1k vc_1 1108 765 1742 2105 C 344 93.31 1319 reject_low 4 ALIGNMENT 256 YS2-7c10.p1k vc_7 765 1108 100 463 F 344 93.31 1319 reject_low 3 ALIGNMENT 0 YS2-7c10.q1k vc_4 801 62 5813 5812 C 740 0.00 1392 reject_low 9 ALIGNMENT 0 YS2-7c10.q1k vc_2 882 803 2106 2105 C 80 0.00 1392 reject_low 18 ALIGNMENT 40 YS2-7c10.q1k vc_2 802 763 2105 2144 C 40 100.00 1392 reject_low 18 ALIGNMENT 0 YS2-7c10.q1k vc_1 882 803 2473 2472 C 80 0.00 1392 reject_low 17 ALIGNMENT 0 YS2-7c10.q1k vc_5 763 62 5064 5063 C 702 0.00 1392 reject_low 20 ALIGNMENT 0 YS2-7c10.q1k vc_5 882 803 5026 5025 C 80 0.00 1392 reject_low 20 ALIGNMENT 38 YS2-7c10.q1k vc_7 765 802 63 100 F 38 100.00 1392 reject_low 21 ALIGNMENT 0 YS2-7c10.p1k vc_1 764 62 2106 2105 C 703 0.00 1319 reject_low 4 ALIGNMENT 0 YS2-7c10.q1k vc_5 763 62 37 36 C 702 0.00 1392 reject_low 23 ALIGNMENT 87 YS2-7c10.q1k vc_4 890 802 1446 1534 C 89 100.00 1392 reject_low 15 ALIGNMENT 0 YS2-7c10.p1k vc_1 764 62 2473 2472 C 703 0.00 1319 reject_low 24 ALIGNMENT 0 YS2-7c10.q1k vc_5 882 800 2 1 C 83 0.00 1392 reject_low 23 ALIGNMENT 40 YS2-7c10.q1k vc_4 763 802 5832 5871 F 40 100.00 1392 reject_low 14 ALIGNMENT 44 YS2-7c10.q1k vc_7 1011 963 6360 6409 C 49 97.96 1392|1,0 reject_low 16 ALIGNMENT 0 YS2-7c10.q1k vc_7 1010 1011 5172 6360 C 0 0.00 1392 reject_low 16 ALIGNMENT 0 YS2-7c10.p1k vc_7 62 764 100 99 F 703 0.00 1319 reject_low 3 ALIGNMENT 290 YS2-7c10.q1k vc_1 802 1188 2531 2920 F 387 93.02 1392 reject_low 10 ALIGNMENT 0 YS2-7c10.q1k vc_5 62 801 2398 2397 F 740 0.00 1392 reject_low 2 ALIGNMENT 0 YS2-7c10.p1k chr10 748 854 173124 173123 F 107 0.00 1319 accept_chi 0 ALIGNMENT 0 YS2-7c10.q1k vc_7 62 764 63 62 F 703 0.00 1392 reject_low 21 ALIGNMENT 36 YS2-7c10.q1k vc_5 799 764 1 36 C 36 100.00 1392 reject_low 23 ALIGNMENT 28 YS2-7c11.p1k chrm 54 183 4017 4149 F 130 82.31 1315 reject_low 12 ALIGNMENT 26 YS2-7c11.p1k chrm 873 791 81859 81943 C 83 92.77 1315 reject_bad_break 0 ALIGNMENT 0 YS2-7c11.q1k chrm 62 939 8223 8222 F 878 0.00 1387 reject_low 8 ALIGNMENT 0 YS2-7c11.p1k chrm 323 849 54844 54843 F 527 0.00 1315 reject_low 5 ALIGNMENT 0 YS2-7c11.p1k chrm 849 318 32233 32232 C 532 0.00 1315 reject_low 9 ALIGNMENT 0 YS2-7c11.p1k chrm 189 77 30348 30347 C 113 0.00 1315 reject_low 3 ALIGNMENT 0 YS2-7c11.p1k chrm 77 740 2552 2551 F 664 0.00 1315 reject_low 1 ALIGNMENT 0 YS2-7c11.p1k chrm 190 189 56674 56703 F 0 0.00 1315 reject_low 11 ALIGNMENT 0 YS2-7c11.p1k chrm 376 849 4370 4369 F 474 0.00 1315 reject_low 12 ALIGNMENT 0 YS2-7c11.p1k chrm 382 849 12842 12841 F 468 0.00 1315 reject_low 4 ALIGNMENT 0 YS2-7c11.p1k chrm 353 323 82329 82324 C 31 0.00 1315 reject_bad_break 0 ALIGNMENT 0 YS2-7c11.p1k chrm 896 77 57077 57076 C 820 0.00 1315 reject_low 2 ALIGNMENT 20 YS2-7c11.p1k chrm 943 897 57031 57076 C 47 82.98 1315 reject_low 2 ALIGNMENT 0 YS2-7c11.p1k chrm 794 849 2605 2604 F 56 0.00 1315 reject_low 1 ALIGNMENT 0 YS2-7c11.q1k chrm 62 943 9024 9023 F 882 0.00 1387 reject_low 7 ALIGNMENT 34 YS2-7c11.p1k chrm 186 54 45086 45222 C 133 84.96 1315 reject_low 6 ALIGNMENT 0 YS2-7c11.p1k chrm 382 849 56895 56894 F 468 0.00 1315 reject_low 11 ALIGNMENT 0 YS2-7c11.p1k chrm 95 77 32453 32452 C 19 0.00 1315 reject_low 9 ALIGNMENT 30 YS2-7c11.p1k chrm 54 189 56534 56673 F 136 83.09 1315 reject_low 11 ALIGNMENT 0 YS2-7c11.q1k chrm 314 314 80504 80544 F 1 0.00 1387 reject_bad_break 0 ALIGNMENT 0 YS2-7c11.p1k chrm 790 741 81944 81943 C 50 0.00 1315 reject_bad_break 0 ALIGNMENT 128 YS2-7c11.p1k chrm 55 381 12515 12842 F 327 86.24 1315 reject_low 4 ALIGNMENT 59 YS2-7c11.p1k chrm 317 96 32232 32452 C 222 84.23 1315 reject_low 9 ALIGNMENT 21 YS2-7c11.p1k chrm 1188 1149 81544 81586 C 40 87.50 1315 reject_bad_break 0 ALIGNMENT 0 YS2-7c11.p1k chrm 849 387 44861 44860 C 463 0.00 1315 reject_low 6 ALIGNMENT 109 YS2-7c11.p1k chrm 187 375 4182 4370 F 189 90.48 1315 reject_low 12 ALIGNMENT 35 YS2-7c11.q1k chrm 944 998 9024 9076 F 55 90.91 1387 reject_low 7 ALIGNMENT 29 YS2-7c11.q1k chrm 948 995 34931 34976 F 48 91.67 1387 reject_low 10 ALIGNMENT 117 YS2-7c11.p1k chrm 189 381 56703 56895 F 193 91.19 1315|1,0 reject_low 11 ALIGNMENT 0 YS2-7c11.p1k chrm 849 409 30132 30131 C 441 0.00 1315 reject_low 3 ALIGNMENT 105 YS2-7c11.p1k chrm 408 190 30131 30347 C 219 89.04 1315 reject_low 3 ALIGNMENT 34 YS2-7c11.q1k chrm 940 997 8223 8279 F 58 89.66 1387 reject_low 8 ALIGNMENT 0 YS2-7c11.q1k chrm 62 945 34281 34280 F 884 0.00 1387 reject_low 6 ALIGNMENT 92 YS2-7c11.p1k chrm 54 322 54572 54844 F 269 85.87 1315 reject_low 5 ALIGNMENT 145 YS2-7c11.q1k chrm 44 313 80217 80503 F 270 92.96 1387 reject_bad_break 0 ALIGNMENT 182 YS2-7c11.p1k chrm 740 354 81944 82328 C 387 95.09 1315 reject_bad_break 0 ALIGNMENT 0 YS2-7c11.p1k chrm 184 186 4150 4181 F 3 0.00 1315 reject_low 12 ALIGNMENT 0 YS2-7c11.p1k chrm 1148 874 81587 81858 C 275 0.00 1315 reject_bad_break 0 ALIGNMENT 21 YS2-7c11.p1k chrm 741 793 2552 2605 F 53 84.91 1315 reject_low 1 ALIGNMENT 0 YS2-7c11.q1k chrm 62 947 34931 34930 F 886 0.00 1387 reject_low 10 ALIGNMENT 34 YS2-7c11.q1k chrm 946 997 34281 34330 F 52 92.31 1387 reject_low 6 ALIGNMENT 153 YS2-7c11.p1k chrm 322 54 82325 82595 C 269 93.31 1315 reject_bad_break 0 ALIGNMENT 0 YS2-7c11.p1k chrm 186 187 45057 45085 C 0 0.00 1315 reject_low 6 ALIGNMENT 111 YS2-7c11.p1k chrm 386 187 44860 45056 C 200 90.50 1315 reject_low 6 ALIGNMENT 451 YS2-7c11.q1k chrm 315 945 80545 81177 F 631 99.21 1387 reject_bad_break 0 ALIGNMENT 0 YS2-7c12.q1k vc_1 470 62 2513 2512 C 409 0.00 511 reject_low 2 ALIGNMENT 0 YS2-7c12.p1k chrm 156 62 2609 2608 C 95 0.00 489 reject_low 6 ALIGNMENT 41 YS2-7c12.q1k vc_1 511 471 2472 2512 C 41 100.00 511 reject_low 2 ALIGNMENT 0 YS2-7c12.q1k vc_7 62 473 13525 13524 F 412 0.00 511 reject_low 5 ALIGNMENT 41 YS2-7c12.q1k vc_3 511 471 2472 2512 C 41 100.00 511 reject_low 3 ALIGNMENT 0 YS2-7c12.p1k chrm 489 471 5875 5874 C 19 0.00 489 reject_bad_break 1 ALIGNMENT 0 YS2-7c12.p1k chrm 156 62 33245 33244 C 95 0.00 489 reject_low 7 ALIGNMENT 21 YS2-7c12.p1k chrm 180 157 33221 33244 C 24 100.00 489 reject_low 7 ALIGNMENT 0 YS2-7c12.q1k vc_3 470 62 2513 2512 C 409 0.00 511 reject_low 3 ALIGNMENT 0 YS2-7c12.q1k chrm 471 511 6345 6344 F 41 0.00 511 reject_bad_break 0 ALIGNMENT 206 YS2-7c12.q1k chrm 33 353 5874 6193 F 321 94.70 511|0,4 reject_bad_break 0 ALIGNMENT 22 YS2-7c12.p1k chrm 187 157 2579 2608 C 31 93.55 489 reject_low 6 ALIGNMENT 206 YS2-7c12.p1k chrm 470 150 5874 6193 C 321 94.70 489|0,5 reject_bad_break 1 ALIGNMENT 0 YS2-7c12.p1k chrm 489 188 2580 2579 C 302 0.00 489 reject_low 6 ALIGNMENT 41 YS2-7c12.q1k vc_4 471 511 5831 5871 F 41 100.00 511 reject_low 4 ALIGNMENT 89 YS2-7c12.q1k chrm 345 470 6220 6345 F 126 100.00 511|5,0 reject_bad_break 0 ALIGNMENT 0 YS2-7c12.p1k chrm 154 155 6189 6223 C 0 0.00 489 reject_bad_break 1 ALIGNMENT 88 YS2-7c12.p1k chrm 158 33 6220 6345 C 126 99.21 489|4,0 reject_bad_break 1 ALIGNMENT 38 YS2-7c12.q1k vc_7 474 511 13525 13562 F 38 100.00 511 reject_low 5 ALIGNMENT 0 YS2-7c12.q1k chrm 350 349 6190 6224 F 0 0.00 511 reject_bad_break 0 ALIGNMENT 0 YS2-7c12.q1k vc_4 62 470 5831 5830 F 409 0.00 511 reject_low 4 ALIGNMENT 0 YS2-7c12.p1k chrm 489 181 33222 33221 C 309 0.00 489 reject_low 7 ALIGNMENT 1034 YS2-7c13.p1k chr08 31 1231 402666 403879 F 1201 96.59 1322 accept 0 ALIGNMENT 947 YS2-7c13.q1k chr08 1135 39 406259 407371 C 1097 96.90 1337 accept 0 ALIGNMENT 870 YS2-7c14.p1k chr01 30 1021 116944 117950 F 992 97.28 1296 accept 0 ALIGNMENT 1065 YS2-7c14.q1k chr01 1269 43 119099 120335 C 1227 96.50 1389 accept 0 ALIGNMENT 41 YS2-7c15.q1k vc_1 340 300 2472 2512 C 41 100.00 340 reject_low 2 ALIGNMENT 0 YS2-7c15.q1k vc_5 301 62 5064 5063 C 240 0.00 340 reject_low 5 ALIGNMENT 0 YS2-7c15.q1k chr14 340 301 741081 741080 C 40 0.00 340 accept_chi 0 ALIGNMENT 0 YS2-7c15.q1k vc_3 299 62 2513 2512 C 238 0.00 340 reject_low 3 ALIGNMENT 36 YS2-7c15.q1k vc_5 337 302 1 36 C 36 100.00 340 reject_low 7 ALIGNMENT 259 YS2-7c15.p1k chr14 32 302 741080 741350 F 271 98.89 321 accept_chi 1 ALIGNMENT 0 YS2-7c15.q1k vc_4 62 299 5831 5830 F 238 0.00 340 reject_low 4 ALIGNMENT 41 YS2-7c15.q1k vc_4 300 340 5831 5871 F 41 100.00 340 reject_low 4 ALIGNMENT 0 YS2-7c15.p1k chr14 303 321 741350 741349 F 19 0.00 321 accept_chi 1 ALIGNMENT 0 YS2-7c15.q1k vc_1 299 62 2513 2512 C 238 0.00 340 reject_low 2 ALIGNMENT 0 YS2-7c15.q1k vc_5 301 62 37 36 C 240 0.00 340 reject_low 7 ALIGNMENT 41 YS2-7c15.q1k vc_3 340 300 2472 2512 C 41 100.00 340 reject_low 3 ALIGNMENT 265 YS2-7c15.q1k chr14 300 30 741080 741350 C 271 99.63 340 accept_chi 0 ALIGNMENT 39 YS2-7c15.q1k vc_5 340 302 5025 5063 C 39 100.00 340 reject_low 5 ALIGNMENT 38 YS2-7c15.q1k vc_7 303 340 13525 13562 F 38 100.00 340 reject_low 6 ALIGNMENT 0 YS2-7c15.q1k vc_7 62 302 13525 13524 F 241 0.00 340 reject_low 6 ALIGNMENT 1030 YS2-7c17.q1k chr05 1160 38 336221 337357 C 1123 97.77 1324 accept 0 ALIGNMENT 1010 YS2-7c17.p1k chr05 31 1150 334149 335269 F 1120 97.05 1296 accept 0 ALIGNMENT 984 YS2-7c18.q1k chr09 30 1190 278069 279242 F 1161 95.69 1314 accept 0 ALIGNMENT 1005 YS2-7c18.p1k chr09 1218 31 281695 282896 C 1188 95.96 1351 accept 0 ALIGNMENT 920 YS2-7c19.q1k chr02 1092 40 179351 180426 C 1053 97.15 1296 accept 0 ALIGNMENT 1010 YS2-7c19.p1k chr02 29 1187 177601 178748 F 1159 96.72 1327 accept 0 ALIGNMENT 999 YS2-7c20.q1k chr07 1139 32 715650 716760 C 1108 97.47 1320 accept_trans 0 ALIGNMENT 0 YS2-7c20.p1k chr02 62 768 643001 643000 F 707 0.00 1292 reject_low 3 ALIGNMENT 0 YS2-7c20.p1k chr02 844 892 643075 643074 F 49 0.00 1292 reject_low 3 ALIGNMENT 0 YS2-7c20.p1k chr07 855 854 707197 712552 F 0 0.00 1292 accept_trans 0 ALIGNMENT 76 YS2-7c20.p1k chr16 768 843 775761 775836 F 76 100.00 1292 reject_low 2 ALIGNMENT 0 YS2-7c20.p1k chr16 62 767 435888 435887 F 706 0.00 1292 reject_low 1 ALIGNMENT 0 YS2-7c20.p1k chr16 844 892 435963 435962 F 49 0.00 1292 reject_low 1 ALIGNMENT 0 YS2-7c20.p1k chr16 844 892 775836 775835 F 49 0.00 1292 reject_low 2 ALIGNMENT 76 YS2-7c20.p1k chr16 768 843 435888 435963 F 76 100.00 1292 reject_low 1 ALIGNMENT 134 YS2-7c20.p1k chr07 852 1041 712550 712748 F 190 91.05 1292|3,0 accept_trans 0 ALIGNMENT 75 YS2-7c20.p1k chr02 769 843 643001 643075 F 75 100.00 1292 reject_low 3 ALIGNMENT 790 YS2-7c20.p1k chr07 31 857 706375 707199 F 827 99.64 1292|0,3 accept_trans 0 ALIGNMENT 0 YS2-7c20.p1k chr16 62 767 775761 775760 F 706 0.00 1292 reject_low 2 ALIGNMENT 1046 YS2-7c22.q1k chr14 1235 39 475689 476902 C 1197 97.24 1253 accept 0 ALIGNMENT 985 YS2-7c22.p1k chr14 29 1147 471158 472290 F 1119 96.96 1299 accept 0 ALIGNMENT 0 YS2-7c23.p1k chr12 288 274 13796 13795 C 15 0.00 288 ambiguous_tel 3 ALIGNMENT 0 YS2-7c23.p1k chr12 77 178 1062475 1062474 F 102 0.00 288 ambiguous_tel 28 ALIGNMENT 64 YS2-7c23.p1k chr01 273 179 2515 2609 C 95 89.47 288 ambiguous_tel 27 ALIGNMENT 0 YS2-7c23.q1k chr02 259 298 8542 8541 F 40 0.00 298 ambiguous_tel 0 ALIGNMENT 66 YS2-7c23.q1k chr11 58 164 2552 2658 F 107 87.85 298 ambiguous_tel 15 ALIGNMENT 0 YS2-7c23.p1k chr09 288 274 9505 9504 C 15 0.00 288 ambiguous_tel 11 ALIGNMENT 0 YS2-7c23.p1k chr01 178 77 2610 2609 C 102 0.00 288 ambiguous_tel 27 ALIGNMENT 0 YS2-7c23.p1k chr11 288 274 2531 2530 C 15 0.00 288 ambiguous_tel 18 ALIGNMENT 0 YS2-7c23.q1k chr16 62 214 8835 8834 F 153 0.00 298 ambiguous_tel 25 ALIGNMENT 42 YS2-7c23.q1k vc_1 298 257 2472 2513 C 42 100.00 298 reject_vc 4 ALIGNMENT 59 YS2-7c23.q1k chr08 35 130 12641 12734 F 96 88.54 298 ambiguous_tel 22 ALIGNMENT 42 YS2-7c23.q1k vc_3 298 257 2472 2513 C 42 100.00 298 reject_vc 6 ALIGNMENT 0 YS2-7c23.q1k vc_3 256 62 2514 2513 C 195 0.00 298 reject_vc 6 ALIGNMENT 0 YS2-7c23.p1k chr10 288 274 9488 9487 C 15 0.00 288 ambiguous_tel 12 ALIGNMENT 0 YS2-7c23.q1k vc_4 62 256 5830 5829 F 195 0.00 298 reject_vc 7 ALIGNMENT 0 YS2-7c23.p1k chr08 178 77 12735 12734 C 102 0.00 288 ambiguous_tel 29 ALIGNMENT 0 YS2-7c23.q1k chr10 165 298 9615 9614 F 134 0.00 298 ambiguous_tel 9 ALIGNMENT 0 YS2-7c23.p1k chr02 288 274 8321 8320 C 15 0.00 288 ambiguous_tel 1 ALIGNMENT 0 YS2-7c23.q1k chr16 246 298 8865 8864 F 53 0.00 298 ambiguous_tel 25 ALIGNMENT 0 YS2-7c23.p1k chr09 274 288 433577 433576 F 15 0.00 288 ambiguous_tel 17 ALIGNMENT 75 YS2-7c23.p1k chr03 179 273 307351 307447 F 95 93.68 288 ambiguous_tel 24 ALIGNMENT 67 YS2-7c23.p1k chr12 273 65 13795 14008 C 209 78.47 288 ambiguous_tel 3 ALIGNMENT 0 YS2-7c23.p1k chr12 274 288 1062567 1062566 F 15 0.00 288 ambiguous_tel 28 ALIGNMENT 39 YS2-7c23.q1k vc_5 298 260 5025 5063 C 39 100.00 298 reject_vc 13 ALIGNMENT 0 YS2-7c23.q1k chr09 165 298 9632 9631 F 134 0.00 298 ambiguous_tel 8 ALIGNMENT 70 YS2-7c23.p1k chr11 273 145 2530 2658 C 129 85.27 288 ambiguous_tel 18 ALIGNMENT 0 YS2-7c23.p1k chr03 274 288 307447 307446 F 15 0.00 288 ambiguous_tel 24 ALIGNMENT 63 YS2-7c23.p1k chr12 179 273 1062475 1062567 F 95 90.53 288 ambiguous_tel 28 ALIGNMENT 200 YS2-7c23.p1k chr02 273 58 8320 8536 C 216 98.15 288 ambiguous_tel 1 ALIGNMENT 0 YS2-7c23.q1k chr08 131 298 12734 12733 F 168 0.00 298 ambiguous_tel 22 ALIGNMENT 0 YS2-7c23.p1k chr07 144 77 7129 7128 C 68 0.00 288 ambiguous_tel 21 ALIGNMENT 0 YS2-7c23.q1k vc_5 259 62 5064 5063 C 198 0.00 298 reject_vc 13 ALIGNMENT 64 YS2-7c23.p1k chr07 273 145 7000 7128 C 129 83.72 288 ambiguous_tel 21 ALIGNMENT 0 YS2-7c23.p1k chr07 288 274 7001 7000 C 15 0.00 288 ambiguous_tel 21 ALIGNMENT 0 YS2-7c23.p1k chr08 288 274 12642 12641 C 15 0.00 288 ambiguous_tel 29 ALIGNMENT 216 YS2-7c23.q1k chr02 35 258 8320 8542 F 224 99.55 298 ambiguous_tel 0 ALIGNMENT 0 YS2-7c23.q1k chr03 298 131 307352 307351 C 168 0.00 298 ambiguous_tel 10 ALIGNMENT 38 YS2-7c23.q1k vc_7 261 298 13525 13562 F 38 100.00 298 reject_vc 16 ALIGNMENT 0 YS2-7c23.q1k chr07 165 298 7128 7127 F 134 0.00 298 ambiguous_tel 20 ALIGNMENT 62 YS2-7c23.p1k chr08 273 179 12641 12734 C 95 89.47 288 ambiguous_tel 29 ALIGNMENT 0 YS2-7c23.p1k chr10 144 77 9616 9615 C 68 0.00 288 ambiguous_tel 12 ALIGNMENT 79 YS2-7c23.p1k chr09 273 145 9504 9632 C 129 87.60 288 ambiguous_tel 11 ALIGNMENT 0 YS2-7c23.q1k vc_5 259 62 37 36 C 198 0.00 298 reject_vc 19 ALIGNMENT 60 YS2-7c23.q1k chr07 58 164 7022 7128 F 107 85.98 298 ambiguous_tel 20 ALIGNMENT 0 YS2-7c23.q1k chr09 298 165 433450 433449 C 134 0.00 298 ambiguous_tel 14 ALIGNMENT 66 YS2-7c23.q1k chr09 164 58 433449 433555 C 107 87.85 298 ambiguous_tel 14 ALIGNMENT 0 YS2-7c23.q1k chr01 131 298 2609 2608 F 168 0.00 298 ambiguous_tel 26 ALIGNMENT 0 YS2-7c23.q1k chr12 246 298 14008 14007 F 53 0.00 298 ambiguous_tel 2 ALIGNMENT 42 YS2-7c23.q1k vc_4 257 298 5830 5871 F 42 100.00 298 reject_vc 7 ALIGNMENT 0 YS2-7c23.q1k vc_1 256 62 2514 2513 C 195 0.00 298 reject_vc 4 ALIGNMENT 75 YS2-7c23.q1k chr09 35 164 9504 9632 F 130 86.92 298 ambiguous_tel 8 ALIGNMENT 0 YS2-7c23.p1k chr03 77 178 307351 307350 F 102 0.00 288 ambiguous_tel 24 ALIGNMENT 75 YS2-7c23.q1k chr03 130 35 307351 307447 C 96 92.71 298 ambiguous_tel 10 ALIGNMENT 0 YS2-7c23.p1k chr09 144 77 9633 9632 C 68 0.00 288 ambiguous_tel 11 ALIGNMENT 59 YS2-7c23.q1k chr12 130 35 1062475 1062567 C 96 89.58 298 ambiguous_tel 23 ALIGNMENT 0 YS2-7c23.q1k chr12 298 131 1062476 1062475 C 168 0.00 298 ambiguous_tel 23 ALIGNMENT 60 YS2-7c23.q1k chr01 58 130 2537 2609 F 73 94.52 298 ambiguous_tel 26 ALIGNMENT 23 YS2-7c23.q1k chr16 215 245 8835 8865 F 31 93.55 298 ambiguous_tel 25 ALIGNMENT 0 YS2-7c23.q1k vc_7 62 260 13525 13524 F 199 0.00 298 reject_vc 16 ALIGNMENT 42 YS2-7c23.q1k vc_2 298 257 2105 2146 C 42 100.00 298 reject_vc 5 ALIGNMENT 0 YS2-7c23.p1k chr01 288 274 2516 2515 C 15 0.00 288 ambiguous_tel 27 ALIGNMENT 80 YS2-7c23.q1k chr12 35 245 13795 14008 F 211 80.09 298 ambiguous_tel 2 ALIGNMENT 36 YS2-7c23.q1k vc_5 295 260 1 36 C 36 100.00 298 reject_vc 19 ALIGNMENT 0 YS2-7c23.p1k chr11 144 77 2659 2658 C 68 0.00 288 ambiguous_tel 18 ALIGNMENT 0 YS2-7c23.p1k chr09 77 144 433449 433448 F 68 0.00 288 ambiguous_tel 17 ALIGNMENT 0 YS2-7c23.q1k vc_2 256 62 2147 2146 C 195 0.00 298 reject_vc 5 ALIGNMENT 79 YS2-7c23.p1k chr10 273 145 9487 9615 C 129 87.60 288 ambiguous_tel 12 ALIGNMENT 75 YS2-7c23.q1k chr10 35 164 9487 9615 F 130 86.92 298 ambiguous_tel 9 ALIGNMENT 0 YS2-7c23.q1k chr11 165 298 2658 2657 F 134 0.00 298 ambiguous_tel 15 ALIGNMENT 70 YS2-7c23.p1k chr09 145 273 433449 433577 F 129 85.27 288 ambiguous_tel 17 ALIGNMENT 653 YS2-7c24.q1k chr10 46 1199 17026 18186 F 1154 86.05 1225 reject_low 4 ALIGNMENT 0 YS2-7c24.p1k chr16 294 62 932785 932784 C 233 0.00 1268 reject_low 5 ALIGNMENT 65 YS2-7c24.q1k chr02 547 307 806343 806583 C 241 75.93 1225 reject_low 7 ALIGNMENT 0 YS2-7c24.q1k chr07 845 548 1077311 1077602 C 298 0.00 1225 reject_low 6 ALIGNMENT 88 YS2-7c24.q1k chr02 1133 846 805758 806050 C 288 76.39 1225 reject_low 7 ALIGNMENT 65 YS2-7c24.q1k chr07 547 307 1077603 1077843 C 241 75.93 1225 reject_low 6 ALIGNMENT 0 YS2-7c24.q1k chr07 306 62 1077844 1077843 C 245 0.00 1225 reject_low 6 ALIGNMENT 69 YS2-7c24.p1k chr07 986 684 1071035 1071337 C 303 73.93 1268 reject_low 1 ALIGNMENT 91 YS2-7c24.q1k chr07 1133 846 1077018 1077310 C 288 76.74 1225 reject_low 6 ALIGNMENT 0 YS2-7c24.q1k chr02 845 548 806051 806342 C 298 0.00 1225 reject_low 7 ALIGNMENT 686 YS2-7c24.q1k chr15 46 1199 22783 23943 F 1154 87.00 1225 reject_low 2 ALIGNMENT 510 YS2-7c24.p1k chr02 770 30 801454 802188 C 741 91.23 1268 accept_tel 0 ALIGNMENT 653 YS2-7c24.q1k chr09 46 1199 17043 18203 F 1154 86.05 1225 reject_low 3 ALIGNMENT 1018 YS2-7c24.q1k chr07 37 1199 1067478 1068647 F 1163 96.22 1225 reject_low 1 ALIGNMENT 0 YS2-7c24.p1k chr07 683 62 1071338 1071337 C 622 0.00 1268 reject_low 1 ALIGNMENT 364 YS2-7c24.p1k chr16 1008 295 932071 932784 C 714 84.03 1268 reject_low 5 ALIGNMENT 0 YS2-7c24.q1k chr02 306 62 806584 806583 C 245 0.00 1225 reject_low 7 ALIGNMENT 0 YS2-7c24.p1k chr02 883 771 801455 801454 C 113 0.00 1268 accept_tel 0 ALIGNMENT 997 YS2-7d02.p1k chr11 34 1203 51077 52256 F 1170 96.84 1359 accept 0 ALIGNMENT 44 YS2-7d02.q1k chr11 81 34 56058 56106 C 48 97.92 103 accept 0 ALIGNMENT 989 YS2-7d03.q1k chr13 31 1164 654442 655586 F 1134 97.09 1334 accept 0 ALIGNMENT 989 YS2-7d03.p1k chr13 1122 30 657066 658168 C 1093 97.07 1331 accept 0 ALIGNMENT 255 YS2-7d04.p1k chr08 297 31 30941 31207 C 267 99.63 315 accept_chi 0 ALIGNMENT 50 YS2-7d04.q1k chr08 36 89 30941 30994 F 54 98.15 111 accept_chi 1 ALIGNMENT 0 YS2-7d04.p1k chr08 315 298 30942 30941 C 18 0.00 315 accept_chi 0 ALIGNMENT 0 YS2-7d05.q1k vc_2 245 62 2146 2145 C 184 0.00 286 reject_low 3 ALIGNMENT 41 YS2-7d05.q1k vc_3 286 246 2472 2512 C 41 100.00 286 reject_low 4 ALIGNMENT 0 YS2-7d05.q1k chr04 286 246 755122 755121 C 41 0.00 286 accept_chi 0 ALIGNMENT 38 YS2-7d05.q1k vc_7 249 286 13525 13562 F 38 100.00 286 reject_low 7 ALIGNMENT 39 YS2-7d05.q1k vc_5 286 248 5025 5063 C 39 100.00 286 reject_low 6 ALIGNMENT 0 YS2-7d05.q1k vc_4 62 245 5831 5830 F 184 0.00 286 reject_low 5 ALIGNMENT 192 YS2-7d05.q1k chr04 245 39 755121 755326 C 207 99.03 286 accept_chi 0 ALIGNMENT 41 YS2-7d05.q1k vc_2 286 246 2105 2145 C 41 100.00 286 reject_low 3 ALIGNMENT 41 YS2-7d05.q1k vc_1 286 246 2472 2512 C 41 100.00 286 reject_low 2 ALIGNMENT 0 YS2-7d05.q1k vc_5 247 62 37 36 C 186 0.00 286 reject_low 8 ALIGNMENT 0 YS2-7d05.q1k vc_3 245 62 2513 2512 C 184 0.00 286 reject_low 4 ALIGNMENT 191 YS2-7d05.p1k chr04 36 240 755121 755326 F 205 99.02 259 accept_chi 1 ALIGNMENT 0 YS2-7d05.p1k chr04 241 259 755326 755325 F 19 0.00 259 accept_chi 1 ALIGNMENT 0 YS2-7d05.q1k vc_7 62 248 13525 13524 F 187 0.00 286 reject_low 7 ALIGNMENT 0 YS2-7d05.q1k vc_5 247 62 5064 5063 C 186 0.00 286 reject_low 6 ALIGNMENT 41 YS2-7d05.q1k vc_4 246 286 5831 5871 F 41 100.00 286 reject_low 5 ALIGNMENT 36 YS2-7d05.q1k vc_5 283 248 1 36 C 36 100.00 286 reject_low 8 ALIGNMENT 0 YS2-7d05.q1k vc_1 245 62 2513 2512 C 184 0.00 286 reject_low 2 ALIGNMENT 0 YS2-7d06.p1k chrm 489 507 41900 41899 F 19 0.00 507 accept 0 ALIGNMENT 0 YS2-7d06.p1k chrm 489 507 21590 21589 F 19 0.00 507 reject_low 1 ALIGNMENT 0 YS2-7d06.p1k chrm 77 130 21233 21232 F 54 0.00 507 reject_low 1 ALIGNMENT 351 YS2-7d06.p1k chrm 74 488 41486 41900 F 415 99.28 507 accept 0 ALIGNMENT 140 YS2-7d06.p1k chrm 131 488 21233 21590 F 358 83.80 507 reject_low 1 ALIGNMENT 33 YS2-7d06.q1k chrm 94 41 21537 21590 C 54 90.74 116 reject_low 1 ALIGNMENT 0 YS2-7d07.q1k chr11 62 180 220449 220448 F 119 0.00 1404 reject_low 2 ALIGNMENT 20 YS2-7d07.q1k chr10 210 237 400163 400190 F 28 96.43 1404 reject_low 4 ALIGNMENT 983 YS2-7d07.q1k chr11 40 1199 220254 221423 F 1160 95.52 1404 accept 0 ALIGNMENT 0 YS2-7d07.q1k chr10 238 855 400073 400072 F 618 0.00 1404 reject_low 3 ALIGNMENT 0 YS2-7d07.q1k chr10 62 209 400163 400162 F 148 0.00 1404 reject_low 4 ALIGNMENT 0 YS2-7d07.q1k chr10 238 855 400190 400189 F 618 0.00 1404 reject_low 4 ALIGNMENT 0 YS2-7d07.q1k chr11 280 855 220439 220438 F 576 0.00 1404 reject_low 1 ALIGNMENT 30 YS2-7d07.q1k chr11 181 225 220449 220493 F 45 91.11 1404 reject_low 2 ALIGNMENT 23 YS2-7d07.q1k chr10 206 237 400042 400073 F 32 96.88 1404 reject_low 3 ALIGNMENT 0 YS2-7d07.q1k chr10 62 205 400042 400041 F 144 0.00 1404 reject_low 3 ALIGNMENT 0 YS2-7d07.q1k chr11 226 855 220493 220492 F 630 0.00 1404 reject_low 2 ALIGNMENT 0 YS2-7d07.q1k chr11 62 234 220395 220394 F 173 0.00 1404 reject_low 1 ALIGNMENT 946 YS2-7d07.p1k chr11 1193 29 220491 221663 C 1165 94.42 1407 accept 0 ALIGNMENT 31 YS2-7d07.q1k chr11 235 279 220395 220439 F 45 91.11 1404 reject_low 1 ALIGNMENT 984 YS2-7d08.p1k chr11 1150 23 364310 365442 C 1128 96.28 1366 accept 0 ALIGNMENT 45 YS2-7d08.q1k chr11 31 83 363536 363587 F 53 98.11 110 accept 0 ALIGNMENT 0 YS2-7d09.q1k chr08 743 773 288645 288678 F 31 0.00 1319 reject_low 2 ALIGNMENT 921 YS2-7d09.q1k chr04 38 1051 1160456 1161475 F 1014 97.24 1319 accept 0 ALIGNMENT 400 YS2-7d09.q1k chr08 50 742 287952 288644 F 693 87.01 1319 reject_low 2 ALIGNMENT 22 YS2-7d09.q1k chr08 774 817 288679 288722 F 44 86.36 1319 reject_low 2 ALIGNMENT 450 YS2-7d09.p1k chr04 1115 29 1159975 1161065 C 1087 80.50 1341 reject_low 1 ALIGNMENT 38 YS2-7d09.p1k chr10 766 881 27878 27993 F 116 79.31 1341 reject_low 12 ALIGNMENT 0 YS2-7d09.q1k chr13 918 685 288262 288261 C 234 0.00 1319 reject_low 7 ALIGNMENT 71 YS2-7d09.p1k chr09 101 595 19825 20319 F 495 72.73 1341 reject_low 11 ALIGNMENT 0 YS2-7d09.q1k chr04 716 918 1164482 1164481 F 203 0.00 1319 reject_low 4 ALIGNMENT 111 YS2-7d09.p1k chr13 144 560 288414 288830 F 417 76.74 1341 reject_low 9 ALIGNMENT 265 YS2-7d09.q1k chr08 78 672 291812 292406 F 595 82.69 1319 reject_low 6 ALIGNMENT 0 YS2-7d09.p1k chr08 884 596 287983 287982 C 289 0.00 1341 reject_low 5 ALIGNMENT 0 YS2-7d09.q1k chr08 62 77 291812 291811 F 16 0.00 1319 reject_low 6 ALIGNMENT 0 YS2-7d09.q1k chr13 114 62 288831 288830 C 53 0.00 1319 reject_low 7 ALIGNMENT 155 YS2-7d09.q1k chr13 684 115 288261 288830 C 570 77.19 1319 reject_low 7 ALIGNMENT 0 YS2-7d09.p1k chr10 614 765 27726 27877 F 152 0.00 1341 reject_low 12 ALIGNMENT 0 YS2-7d09.p1k chr13 561 884 288830 288829 F 324 0.00 1341 reject_low 9 ALIGNMENT 0 YS2-7d09.p1k chr09 596 884 20319 20318 F 289 0.00 1341 reject_low 11 ALIGNMENT 438 YS2-7d09.q1k chr04 80 715 1163847 1164482 F 636 90.88 1319 reject_low 4 ALIGNMENT 0 YS2-7d09.q1k chr08 673 918 292406 292405 F 246 0.00 1319 reject_low 6 ALIGNMENT 0 YS2-7d09.p1k chr09 62 100 19825 19824 F 39 0.00 1341 reject_low 11 ALIGNMENT 75 YS2-7d09.q1k chr09 684 71 19713 20328 C 614 72.15 1319 reject_low 10 ALIGNMENT 988 YS2-7d09.p1k chr04 1143 29 1163293 1164414 C 1115 96.23 1341 accept 0 ALIGNMENT 0 YS2-7d09.q1k chr09 918 685 19714 19713 C 234 0.00 1319 reject_low 10 ALIGNMENT 440 YS2-7d09.p1k chr04 892 29 1154809 1155673 C 864 84.61 1341 reject_low 3 ALIGNMENT 0 YS2-7d09.q1k chr08 818 918 288722 288721 F 101 0.00 1319 reject_low 2 ALIGNMENT 127 YS2-7d09.q1k chr10 720 41 27064 27746 C 680 74.71 1319 reject_low 8 ALIGNMENT 893 YS2-7d09.q1k chr04 38 987 1155064 1156013 F 950 98.42 1319 reject_low 1 ALIGNMENT 0 YS2-7d09.q1k chr04 62 79 1163847 1163846 F 18 0.00 1319 reject_low 4 ALIGNMENT 372 YS2-7d09.p1k chr08 595 29 287982 288549 C 567 89.77 1341 reject_low 5 ALIGNMENT 0 YS2-7d09.q1k chr10 918 721 27065 27064 C 198 0.00 1319 reject_low 8 ALIGNMENT 89 YS2-7d09.p1k chr10 31 613 27139 27725 F 583 73.07 1341 reject_low 12 ALIGNMENT 0 YS2-7d09.p1k chr13 62 143 288414 288413 F 82 0.00 1341 reject_low 9 ALIGNMENT 492 YS2-7d09.p1k chr08 1115 29 291291 292381 C 1087 81.69 1341 reject_low 2 ALIGNMENT 967 YS2-7d10.p1k chr04 1236 56 1163218 1164414 C 1181 94.58 1364 accept 0,1 ALIGNMENT 111 YS2-7d10.p1k chr13 170 586 288414 288830 F 417 76.74 1364 reject_low 6 ALIGNMENT 367 YS2-7d10.p1k chr08 621 56 287982 288549 C 566 89.58 1364 reject_low 5 ALIGNMENT 52 YS2-7d10.q1k chr04 41 92 1155064 1155115 F 52 100.00 114 accept 0 ALIGNMENT 0 YS2-7d10.p1k chr13 77 169 288414 288413 F 93 0.00 1364 reject_low 6 ALIGNMENT 431 YS2-7d10.p1k chr04 898 56 1154829 1155673 C 843 84.70 1364 reject_low 4 ALIGNMENT 477 YS2-7d10.p1k chr08 1175 56 291257 292381 C 1120 80.80 1364 reject_low 2 ALIGNMENT 441 YS2-7d10.p1k chr04 1236 56 1159869 1161065 C 1181 80.10 1364 reject_low 3 ALIGNMENT 0 YS2-7d10.p1k chr13 587 888 288830 288829 F 302 0.00 1364 reject_low 6 ALIGNMENT 52 YS2-7d10.q1k chr04 41 92 1160456 1160507 F 52 100.00 114 accept 1 ALIGNMENT 0 YS2-7d10.p1k chr08 888 622 287983 287982 C 267 0.00 1364 reject_low 5 ALIGNMENT 586 YS2-7d11.p1k chr02 52 1114 6538 7607 F 1063 86.83 1386 reject_low 8 ALIGNMENT 0 YS2-7d11.p1k chr04 177 905 954 953 F 729 0.00 1386 reject_low 18 ALIGNMENT 0 YS2-7d11.p1k chr03 905 319 315588 315587 C 587 0.00 1386 reject_low 11 ALIGNMENT 125 YS2-7d11.p1k chr15 46 318 771 1039 F 273 84.98 1386 reject_low 13 ALIGNMENT 69 YS2-7d11.p1k chr07 43 205 702 862 F 163 84.05 1386 reject_low 16 ALIGNMENT 571 YS2-7d11.p1k chr11 53 1064 739 1756 F 1012 87.55 1386 reject_low 9 ALIGNMENT 0 YS2-7d11.p1k chr10 905 177 744768 744767 C 729 0.00 1386 reject_low 19 ALIGNMENT 0 YS2-7d11.p1k chr05 905 273 569449 569448 C 633 0.00 1386 reject_low 15 ALIGNMENT 0 YS2-7d11.q1k chr04 599 905 1519508 1519507 F 307 0.00 1355 reject_low 1 ALIGNMENT 50 YS2-7d11.p1k chr04 43 176 825 954 F 134 84.33 1386 reject_low 18 ALIGNMENT 0 YS2-7d11.p1k chr03 206 905 1178 1177 F 700 0.00 1386 reject_low 17 ALIGNMENT 158 YS2-7d11.p1k chr11 507 264 665307 665548 C 244 89.75 1386 reject_low 22 ALIGNMENT 123 YS2-7d11.p1k chr15 322 52 1083721 1083988 C 271 84.13 1386 reject_low 14 ALIGNMENT 0 YS2-7d11.p1k chr11 905 508 665308 665307 C 398 0.00 1386 reject_low 22 ALIGNMENT 634 YS2-7d11.p1k chr12 1065 43 1063327 1064357 C 1023 88.95 1386 reject_low 7 ALIGNMENT 0 YS2-7d11.q1k chr04 905 400 1519282 1519281 C 506 0.00 1355 reject_low 12 ALIGNMENT 0 YS2-7d11.p1k chr07 206 905 862 861 F 700 0.00 1386 reject_low 16 ALIGNMENT 360 YS2-7d11.q1k chr04 178 598 1519088 1519508 F 421 96.91 1355 reject_low 1 ALIGNMENT 636 YS2-7d11.p1k chr01 43 1064 722 1752 F 1022 88.94 1386 reject_low 6 ALIGNMENT 0 YS2-7d11.q1k chr04 370 62 1519310 1519309 C 309 0.00 1355 reject_low 12 ALIGNMENT 26 YS2-7d11.p1k chr11 120 52 665546 665612 C 69 89.86 1386 reject_low 22 ALIGNMENT 0 YS2-7d11.p1k chr15 905 323 1083722 1083721 C 583 0.00 1386 reject_low 14 ALIGNMENT 58 YS2-7d11.p1k chr03 53 205 1029 1178 F 153 84.31 1386 reject_low 17 ALIGNMENT 611 YS2-7d11.p1k chr12 53 1114 12016 13085 F 1062 87.38 1386 reject_low 3 ALIGNMENT 251 YS2-7d11.p1k chr15 627 1114 11052 11550 F 488 84.84 1386 reject_low 10 ALIGNMENT 47 YS2-7d11.p1k chr02 176 43 812323 812452 C 134 83.58 1386 reject_low 20 ALIGNMENT 116 YS2-7d11.p1k chr05 272 43 569448 569673 C 230 86.96 1386 reject_low 15 ALIGNMENT 0 YS2-7d11.p1k chr02 905 177 812324 812323 C 729 0.00 1386 reject_low 20 ALIGNMENT 0 YS2-7d11.q1k chr04 62 177 1519088 1519087 F 116 0.00 1355 reject_low 1 ALIGNMENT 650 YS2-7d11.p1k chr10 43 1064 7688 8716 F 1022 89.53 1386 reject_low 5 ALIGNMENT 653 YS2-7d11.p1k chr09 43 1064 7705 8733 F 1022 89.63 1386 reject_low 4 ALIGNMENT 617 YS2-7d11.p1k chr14 1114 53 782278 783347 C 1062 87.57 1386 reject_low 2 ALIGNMENT 0 YS2-7d11.p1k chr15 319 905 1039 1038 F 587 0.00 1386 reject_low 13 ALIGNMENT 50 YS2-7d11.p1k chr10 176 43 744767 744896 C 134 84.33 1386 reject_low 19 ALIGNMENT 0 YS2-7d11.p1k chr15 62 626 11052 11051 F 565 0.00 1386 reject_low 10 ALIGNMENT 889 YS2-7d11.q1k chr04 39 1146 1518950 1520066 F 1108 94.49 1355 accept 0 ALIGNMENT 36 YS2-7d11.p1k chr06 43 120 5451 5526 F 78 91.03 1386 reject_low 21 ALIGNMENT 146 YS2-7d11.p1k chr03 318 43 315587 315858 C 276 86.96 1386 reject_low 11 ALIGNMENT 0 YS2-7d11.p1k chr11 263 121 665549 665545 C 143 0.00 1386 reject_low 22 ALIGNMENT 0 YS2-7d11.p1k chr06 121 905 5526 5525 F 785 0.00 1386 reject_low 21 ALIGNMENT 27 YS2-7d11.q1k chr04 399 371 1519281 1519309 C 29 100.00 1355 reject_low 12 ALIGNMENT 584 YS2-7d11.p1k chr04 1064 43 1523654 1524687 C 1022 87.38 1386 accept 0 ALIGNMENT 847 YS2-7d13.p1k chr01 29 1002 116944 117936 F 974 97.33 1272 accept 0 ALIGNMENT 973 YS2-7d13.q1k chr01 1185 43 119179 120335 C 1143 96.24 1336 accept 0 ALIGNMENT 48 YS2-7d14.q1k chr08 87 33 560070 560123 C 55 98.18 109 reject_low 12 ALIGNMENT 944 YS2-7d14.p1k chr14 1201 38 5433 6611 C 1164 93.64 1376 ambiguous_tel 3 ALIGNMENT 996 YS2-7d14.p1k chr10 1201 81 5805 6931 C 1121 96.07 1376 ambiguous_tel 1 ALIGNMENT 893 YS2-7d14.p1k chr15 38 1201 1084621 1085794 F 1164 92.61 1376 ambiguous_tel 8 ALIGNMENT 807 YS2-7d14.p1k chr12 37 1201 1065158 1066278 F 1165 91.33 1376 reject_low 14 ALIGNMENT 48 YS2-7d14.q1k chr06 33 87 1545 1598 F 55 98.18 109 reject_low 11 ALIGNMENT 893 YS2-7d14.p1k chr04 38 1201 1525456 1526629 F 1164 92.61 1376 ambiguous_tel 6 ALIGNMENT 893 YS2-7d14.p1k chr12 38 1201 1071657 1072830 F 1164 92.61 1376 ambiguous_tel 7 ALIGNMENT 922 YS2-7d14.p1k chr05 37 1190 570329 571463 F 1154 94.02 1376 ambiguous_tel 5 ALIGNMENT 22 YS2-7d14.p1k chr08 328 304 4972 4996 C 25 96.00 1376 reject_low 18 ALIGNMENT 48 YS2-7d14.q1k chr16 33 87 2200 2253 F 55 98.18 109 ambiguous_tel 4 ALIGNMENT 48 YS2-7d14.q1k chr02 33 87 2708 2761 F 55 98.18 109 reject_low 13 ALIGNMENT 944 YS2-7d14.p1k chr07 38 1201 1084357 1085535 F 1164 93.73 1376 ambiguous_tel 2 ALIGNMENT 642 YS2-7d14.p1k chr05 1190 206 5400 6338 C 985 90.05 1376 reject_low 15 ALIGNMENT 882 YS2-7d14.p1k chr12 1201 38 4483 5655 C 1164 92.27 1376 ambiguous_tel 9 ALIGNMENT 48 YS2-7d14.q1k chr04 87 33 1529718 1529771 C 55 98.18 109 ambiguous_tel 6 ALIGNMENT 0 YS2-7d14.p1k chr05 205 62 6339 6338 C 144 0.00 1376 reject_low 15 ALIGNMENT 539 YS2-7d14.p1k chr08 1201 466 4215 4951 C 736 91.03 1376 reject_low 18 ALIGNMENT 742 YS2-7d14.p1k chr16 318 1201 942804 943693 F 884 94.34 1376 reject_low 17 ALIGNMENT 828 YS2-7d14.p1k chr02 1201 38 4684 5840 C 1164 91.15 1376 reject_low 13 ALIGNMENT 882 YS2-7d14.p1k chr13 1201 38 4359 5531 C 1164 92.27 1376 ambiguous_tel 10 ALIGNMENT 868 YS2-7d14.p1k chr06 1201 38 3521 4678 C 1164 92.10 1376 reject_low 11 ALIGNMENT 944 YS2-7d14.p1k chr16 1201 38 5342 6520 C 1164 93.64 1376 ambiguous_tel 4 ALIGNMENT 996 YS2-7d14.p1k chr09 1201 81 5822 6948 C 1121 96.07 1376 ambiguous_tel 0 ALIGNMENT 882 YS2-7d14.p1k chr12 1201 38 10018 11190 C 1164 92.27 1376 reject_low 16 ALIGNMENT 832 YS2-7d14.p1k chr08 38 1201 556992 558147 F 1164 91.41 1376 reject_low 12 ALIGNMENT 48 YS2-7d14.q1k chr15 87 33 1088883 1088936 C 55 98.18 109 ambiguous_tel 8 ALIGNMENT 0 YS2-7d14.p1k chr08 465 329 4952 4971 C 137 0.00 1376 reject_low 18 ALIGNMENT 48 YS2-7d14.q1k chr10 33 87 2662 2715 F 55 98.18 109 ambiguous_tel 1 ALIGNMENT 48 YS2-7d14.q1k chr12 87 33 1075919 1075972 C 55 98.18 109 ambiguous_tel 7 ALIGNMENT 48 YS2-7d14.q1k chr05 87 33 574547 574600 C 55 98.18 109 ambiguous_tel 5 ALIGNMENT 48 YS2-7d14.q1k chr07 87 33 1088624 1088677 C 55 98.18 109 ambiguous_tel 2 ALIGNMENT 48 YS2-7d14.q1k chr12 33 87 2508 2561 F 55 98.18 109 ambiguous_tel 9 ALIGNMENT 0 YS2-7d14.p1k chr10 80 62 6932 6931 C 19 0.00 1376 ambiguous_tel 1 ALIGNMENT 48 YS2-7d14.q1k chr09 33 87 2679 2732 F 55 98.18 109 ambiguous_tel 0 ALIGNMENT 48 YS2-7d14.q1k chr13 33 87 2384 2437 F 55 98.18 109 ambiguous_tel 10 ALIGNMENT 0 YS2-7d14.p1k chr09 80 62 6949 6948 C 19 0.00 1376 ambiguous_tel 0 ALIGNMENT 48 YS2-7d14.q1k chr14 33 87 2291 2344 F 55 98.18 109 ambiguous_tel 3 ALIGNMENT 48 YS2-7d14.q1k chr12 87 33 1069256 1069309 C 55 98.18 109 reject_low 14 ALIGNMENT 48 YS2-7d14.q1k chr05 33 87 2355 2408 F 55 98.18 109 reject_low 15 ALIGNMENT 0 YS2-7d14.p1k chr16 62 317 942804 942803 F 256 0.00 1376 reject_low 17 ALIGNMENT 0 YS2-7d14.p1k chr08 303 62 4997 4996 C 242 0.00 1376 reject_low 18 ALIGNMENT 999 YS2-7d15.q1k chr07 39 1229 660550 661751 F 1191 95.97 1353 accept 0 ALIGNMENT 1032 YS2-7d15.p1k chr07 1205 29 663891 665076 C 1177 97.20 1360 accept 0 ALIGNMENT 864 YS2-7d16.p1k chr04 1160 61 1486382 1487503 C 1100 95.09 1355 accept 0 ALIGNMENT 960 YS2-7d17.q1k chr05 1177 39 239790 240932 C 1139 95.87 1362 accept 0 ALIGNMENT 1010 YS2-7d18.p1k chr11 28 1280 25326 26586 F 1253 94.25 1363 accept 0 ALIGNMENT 35 YS2-7d18.q1k chr11 93 42 31309 31357 C 52 94.23 122 accept 0 ALIGNMENT 165 YS2-7d19.p1k vc_4 912 1141 5871 6111 F 230 92.17 1323 reject_low 6 ALIGNMENT 165 YS2-7d19.p1k vc_2 1176 912 1825 2105 C 265 89.43 1323 reject_low 3 ALIGNMENT 165 YS2-7d19.p1k vc_7 912 1141 100 340 F 230 92.17 1323 reject_low 7 ALIGNMENT 0 YS2-7d19.p1k vc_3 911 62 2106 2105 C 850 0.00 1323 reject_low 4 ALIGNMENT 0 YS2-7d19.p1k vc_1 911 62 2473 2472 C 850 0.00 1323 reject_low 9 ALIGNMENT 26 YS2-7d19.p1k vc_1 942 912 2441 2472 C 31 96.77 1323 reject_low 9 ALIGNMENT 165 YS2-7d19.p1k vc_1 1176 912 1825 2105 C 265 89.43 1323 reject_low 2 ALIGNMENT 796 YS2-7d19.p1k chr02 30 895 539321 540188 F 866 98.38 1323 accept_chi 1 ALIGNMENT 0 YS2-7d19.p1k vc_2 911 62 2106 2105 C 850 0.00 1323 reject_low 3 ALIGNMENT 26 YS2-7d19.p1k vc_3 942 912 2441 2472 C 31 96.77 1323 reject_low 10 ALIGNMENT 165 YS2-7d19.p1k vc_7 912 1141 13562 13802 F 230 92.17 1323 reject_low 8 ALIGNMENT 0 YS2-7d19.p1k vc_4 62 911 5871 5870 F 850 0.00 1323 reject_low 6 ALIGNMENT 806 YS2-7d19.q1k chr02 892 24 539321 540188 C 869 98.73 893 accept_chi 0 ALIGNMENT 0 YS2-7d19.p1k vc_7 62 911 13562 13561 F 850 0.00 1323 reject_low 8 ALIGNMENT 0 YS2-7d19.p1k vc_3 911 62 2473 2472 C 850 0.00 1323 reject_low 10 ALIGNMENT 0 YS2-7d19.p1k vc_7 62 911 100 99 F 850 0.00 1323 reject_low 7 ALIGNMENT 165 YS2-7d19.p1k vc_3 1176 912 1825 2105 C 265 89.43 1323 reject_low 4 ALIGNMENT 0 YS2-7d19.p1k vc_1 911 62 2106 2105 C 850 0.00 1323 reject_low 2 ALIGNMENT 165 YS2-7d19.p1k vc_5 1176 912 4745 5025 C 265 89.43 1323 reject_low 5 ALIGNMENT 0 YS2-7d19.p1k vc_5 911 62 5026 5025 C 850 0.00 1323 reject_low 5 ALIGNMENT 45 YS2-7d20.q1k chr12 88 34 458839 458893 C 55 96.36 114 accept 0 ALIGNMENT 0 YS2-7d20.p1k chr12 634 652 458889 458888 F 19 0.00 652 accept 0 ALIGNMENT 385 YS2-7d20.p1k chr12 35 633 467470 468026 F 599 92.15 652 accept 1 ALIGNMENT 0 YS2-7d20.p1k chr12 634 652 468026 468025 F 19 0.00 652 accept 1 ALIGNMENT 45 YS2-7d20.q1k chr12 88 34 467976 468030 C 55 96.36 114 accept 1 ALIGNMENT 385 YS2-7d20.p1k chr12 35 633 458333 458889 F 599 92.15 652 accept 0 ALIGNMENT 967 YS2-7d21.q1k chr14 1253 74 475699 476880 C 1180 95.25 1288 accept 0 ALIGNMENT 863 YS2-7d21.p1k chr14 182 1253 471296 472373 F 1072 94.40 1330 accept 0 ALIGNMENT 934 YS2-7d22.p1k chr04 66 1167 326422 327536 F 1102 96.46 1296 accept 0 ALIGNMENT 37 YS2-7d22.q1k chr04 79 37 330884 330927 C 43 97.67 102 accept 0 ALIGNMENT 95 YS2-7d23.q1k chr02 1168 838 805720 806050 C 331 77.04 1224 reject_low 7 ALIGNMENT 76 YS2-7d23.p1k chr07 1137 683 1070881 1071337 C 455 71.87 1263 accept_tel 0 ALIGNMENT 0 YS2-7d23.p1k chr07 682 62 1071338 1071337 C 621 0.00 1263 accept_tel 0 ALIGNMENT 506 YS2-7d23.p1k chr02 769 30 801454 802188 C 740 91.08 1263 reject_low 1 ALIGNMENT 65 YS2-7d23.q1k chr07 539 299 1077603 1077843 C 241 75.93 1224 reject_low 6 ALIGNMENT 648 YS2-7d23.q1k chr10 31 1202 17019 18191 F 1172 85.75 1224 reject_low 4 ALIGNMENT 98 YS2-7d23.q1k chr07 1168 838 1076980 1077310 C 331 77.34 1224 reject_low 6 ALIGNMENT 350 YS2-7d23.p1k chr16 1008 294 932071 932784 C 715 83.50 1263 reject_low 5 ALIGNMENT 648 YS2-7d23.q1k chr09 31 1202 17036 18208 F 1172 85.75 1224 reject_low 3 ALIGNMENT 0 YS2-7d23.p1k chr02 883 770 801455 801454 C 114 0.00 1263 reject_low 1 ALIGNMENT 1021 YS2-7d23.q1k chr07 32 1224 1067481 1068674 F 1193 95.56 1224 accept_tel 0 ALIGNMENT 0 YS2-7d23.q1k chr02 298 62 806584 806583 C 237 0.00 1224 reject_low 7 ALIGNMENT 65 YS2-7d23.q1k chr02 539 299 806343 806583 C 241 75.93 1224 reject_low 7 ALIGNMENT 0 YS2-7d23.q1k chr02 837 540 806051 806342 C 298 0.00 1224 reject_low 7 ALIGNMENT 0 YS2-7d23.q1k chr07 837 540 1077311 1077602 C 298 0.00 1224 reject_low 6 ALIGNMENT 0 YS2-7d23.q1k chr07 298 62 1077844 1077843 C 237 0.00 1224 reject_low 6 ALIGNMENT 681 YS2-7d23.q1k chr15 31 1202 22776 23948 F 1172 86.69 1224 reject_low 2 ALIGNMENT 0 YS2-7d23.p1k chr16 293 62 932785 932784 C 232 0.00 1263 reject_low 5 ALIGNMENT 23 YS2-7e01.p1k chr03 651 614 736 772 C 38 89.47 1289 reject_low 2,4 ALIGNMENT 23 YS2-7e01.p1k chr02 614 651 812701 812737 F 38 89.47 1289 reject_low 20 ALIGNMENT 205 YS2-7e01.p1k chr10 585 248 7511 7848 C 338 88.76 1289 reject_low 16 ALIGNMENT 0 YS2-7e01.p1k chr12 882 586 11830 11829 C 297 0.00 1289 reject_low 6 ALIGNMENT 0 YS2-7e01.p1k chr09 613 586 7454 7527 C 28 0.00 1289 reject_low 15 ALIGNMENT 0 YS2-7e01.p1k chr03 882 652 737 736 C 231 0.00 1289 reject_low 2,4 ALIGNMENT 0 YS2-7e01.p1k chr05 586 882 569850 569849 F 297 0.00 1289 reject_low 1 ALIGNMENT 348 YS2-7e01.p1k chr03 585 34 842 1392 C 552 89.49 1289 reject_low 2 ALIGNMENT 0 YS2-7e01.p1k chr10 882 652 7402 7401 C 231 0.00 1289 reject_low 16 ALIGNMENT 0 YS2-7e01.p1k chr16 623 586 6887 6966 C 38 0.00 1289 reject_low 14 ALIGNMENT 183 YS2-7e01.p1k chr08 585 278 5248 5554 C 308 88.64 1289 reject_low 19 ALIGNMENT 128 YS2-7e01.p1k chr03 248 34 4072 4285 C 215 88.84 1289 reject_low 4 ALIGNMENT 203 YS2-7e01.p1k chr02 585 248 6352 6688 C 338 88.76 1289 reject_low 9 ALIGNMENT 0 YS2-7e01.p1k chr16 247 62 7305 7304 C 186 0.00 1289 reject_low 14 ALIGNMENT 0 YS2-7e01.p1k chr11 62 333 665547 665546 F 272 0.00 1289 reject_low 11 ALIGNMENT 232 YS2-7e01.p1k chr12 585 248 11829 12166 C 338 91.42 1289 reject_low 6 ALIGNMENT 0 YS2-7e01.p1k chr07 652 882 1084002 1084001 F 231 0.00 1289 reject_low 21 ALIGNMENT 28 YS2-7e01.p1k chr02 909 946 793906 793943 F 38 92.11 1289 reject_bad_break 0 ALIGNMENT 177 YS2-7e01.p1k chr14 585 278 7172 7478 C 308 87.99 1289 reject_low 18 ALIGNMENT 20 YS2-7e01.p1k chr04 614 651 1524940 1524976 F 38 86.84 1289 reject_low 17 ALIGNMENT 0 YS2-7e01.p1k chr04 62 247 1524527 1524526 F 186 0.00 1289 reject_low 17 ALIGNMENT 0 YS2-7e01.p1k chr05 248 247 566946 569514 F 0 0.00 1289 reject_low 1 ALIGNMENT 0 YS2-7e01.p1k chr02 62 652 793568 793567 F 591 0.00 1289 reject_bad_break 0 ALIGNMENT 0 YS2-7e01.p1k chr14 586 882 783534 783533 F 297 0.00 1289 reject_low 5 ALIGNMENT 205 YS2-7e01.p1k chr09 585 248 7528 7865 C 338 88.76 1289 reject_low 15 ALIGNMENT 0 YS2-7e01.p1k chr04 652 882 1524976 1524975 F 231 0.00 1289 reject_low 17 ALIGNMENT 20 YS2-7e01.p1k chr08 651 614 5135 5171 C 38 89.47 1289 reject_low 19 ALIGNMENT 167 YS2-7e01.p1k chr10 277 585 744767 745073 F 309 87.06 1289 reject_low 10 ALIGNMENT 0 YS2-7e01.p1k chr14 277 62 7479 7478 C 216 0.00 1289 reject_low 18 ALIGNMENT 0 YS2-7e01.p1k chr15 652 882 1084281 1084280 F 231 0.00 1289 reject_low 13 ALIGNMENT 147 YS2-7e01.p1k chr08 365 585 556141 556361 F 221 90.95 1289 reject_low 12 ALIGNMENT 0 YS2-7e01.p1k chr09 882 652 7419 7418 C 231 0.00 1289 reject_low 15 ALIGNMENT 168 YS2-7e01.p1k chr11 334 585 665547 665798 F 252 91.27 1289 reject_low 11 ALIGNMENT 0 YS2-7e01.p1k chr12 247 62 12167 12166 C 186 0.00 1289 reject_low 6 ALIGNMENT 0 YS2-7e01.p1k chr15 62 247 1083837 1083836 F 186 0.00 1289 reject_low 13 ALIGNMENT 0 YS2-7e01.p1k chr07 62 276 1083590 1083589 F 215 0.00 1289 reject_low 21 ALIGNMENT 0 YS2-7e01.p1k chr03 586 882 316035 316034 F 297 0.00 1289 reject_low 8 ALIGNMENT 0 YS2-7e01.p1k chr02 586 613 812630 812700 F 28 0.00 1289 reject_low 20 ALIGNMENT 0 YS2-7e01.p1k chr03 62 247 315698 315697 F 186 0.00 1289 reject_low 8 ALIGNMENT 0 YS2-7e01.p1k chr10 247 62 7849 7848 C 186 0.00 1289 reject_low 16 ALIGNMENT 189 YS2-7e01.p1k chr05 248 585 569515 569850 F 338 87.57 1289 reject_low 1 ALIGNMENT 226 YS2-7e01.p1k chr15 248 585 1083837 1084174 F 338 90.83 1289 reject_low 13 ALIGNMENT 0 YS2-7e01.p1k chr10 62 276 744767 744766 F 215 0.00 1289 reject_low 10 ALIGNMENT 45 YS2-7e01.p1k chr02 832 893 793809 793870 F 62 91.94 1289 reject_bad_break 0 ALIGNMENT 0 YS2-7e01.p1k chr02 652 882 812737 812736 F 231 0.00 1289 reject_low 20 ALIGNMENT 0 YS2-7e01.p1k chr09 247 62 7866 7865 C 186 0.00 1289 reject_low 15 ALIGNMENT 0 YS2-7e01.p1k chr02 62 276 812323 812322 F 215 0.00 1289 reject_low 20 ALIGNMENT 0 YS2-7e01.p1k chr02 894 908 793871 793905 F 15 0.00 1289 reject_bad_break 0 ALIGNMENT 0 YS2-7e01.p1k chr16 882 652 6861 6860 C 231 0.00 1289 reject_low 14 ALIGNMENT 0 YS2-7e01.p1k chr02 882 586 6353 6352 C 297 0.00 1289 reject_low 9 ALIGNMENT 0 YS2-7e01.p1k chr07 882 586 526 525 C 297 0.00 1289 reject_low 3 ALIGNMENT 0 YS2-7e01.p1k chr15 586 623 1084175 1084254 F 38 0.00 1289 reject_low 13 ALIGNMENT 0 YS2-7e01.p1k chr09 581 882 439316 439315 F 302 0.00 1289 reject_low 7 ALIGNMENT 158 YS2-7e01.p1k chr05 34 247 566732 566945 F 214 93.46 1289 reject_low 1 ALIGNMENT 0 YS2-7e01.p1k chr10 613 586 7437 7510 C 28 0.00 1289 reject_low 16 ALIGNMENT 0 YS2-7e01.p1k chr02 247 62 6689 6688 C 186 0.00 1289 reject_low 9 ALIGNMENT 211 YS2-7e01.p1k chr04 248 585 1524527 1524864 F 338 89.35 1289 reject_low 17 ALIGNMENT 24 YS2-7e01.p1k chr10 651 614 7401 7436 C 38 92.11 1289 reject_low 16 ALIGNMENT 0 YS2-7e01.p1k chr03 613 586 773 841 C 28 0.00 1289 reject_low 2 ALIGNMENT 0 YS2-7e01.p1k chr08 277 62 5555 5554 C 216 0.00 1289 reject_low 19 ALIGNMENT 0 YS2-7e01.p1k chr09 62 276 439013 439012 F 215 0.00 1289 reject_low 7 ALIGNMENT 0 YS2-7e01.p1k chr14 610 586 7099 7171 C 25 0.00 1289 reject_low 18 ALIGNMENT 158 YS2-7e01.p1k chr07 277 580 1083590 1083891 F 304 86.51 1289 reject_low 21 ALIGNMENT 20 YS2-7e01.p1k chr15 624 651 1084255 1084281 F 28 92.86 1289 reject_low 13 ALIGNMENT 226 YS2-7e01.p1k chr16 585 248 6967 7304 C 338 90.83 1289 reject_low 14 ALIGNMENT 105 YS2-7e01.p1k chr02 653 805 793568 793721 F 153 90.20 1289 reject_bad_break 0 ALIGNMENT 0 YS2-7e01.p1k chr08 882 652 5136 5135 C 231 0.00 1289 reject_low 19 ALIGNMENT 0 YS2-7e01.p1k chr08 613 586 5172 5247 C 28 0.00 1289 reject_low 19 ALIGNMENT 0 YS2-7e01.p1k chr07 205 183 905 894 C 23 0.00 1289 reject_low 3 ALIGNMENT 27 YS2-7e01.p1k chr14 651 611 7060 7098 C 41 92.68 1289 reject_low 18 ALIGNMENT 235 YS2-7e01.p1k chr14 248 585 783197 783534 F 338 91.72 1289 reject_low 5 ALIGNMENT 0 YS2-7e01.p1k chr08 586 882 556361 556360 F 297 0.00 1289 reject_low 12 ALIGNMENT 0 YS2-7e01.p1k chr02 806 831 793722 793808 F 26 0.00 1289 reject_bad_break 0 ALIGNMENT 0 YS2-7e01.p1k chr10 586 882 745073 745072 F 297 0.00 1289 reject_low 10 ALIGNMENT 106 YS2-7e01.p1k chr07 182 34 895 1042 C 149 92.62 1289 reject_low 3 ALIGNMENT 20 YS2-7e01.p1k chr16 651 624 6860 6886 C 28 92.86 1289 reject_low 14 ALIGNMENT 0 YS2-7e01.p1k chr08 62 364 556141 556140 F 303 0.00 1289 reject_low 12 ALIGNMENT 0 YS2-7e01.p1k chr14 882 652 7061 7060 C 231 0.00 1289 reject_low 18 ALIGNMENT 0 YS2-7e01.p1k chr04 586 613 1524865 1524939 F 28 0.00 1289 reject_low 17 ALIGNMENT 311 YS2-7e01.p1k chr07 585 206 525 904 C 380 95.53 1289 reject_low 3 ALIGNMENT 0 YS2-7e01.p1k chr07 581 623 1083892 1083975 F 43 0.00 1289 reject_low 21 ALIGNMENT 0 YS2-7e01.p1k chr03 613 249 773 4071 C 365 0.00 1289 reject_low 4 ALIGNMENT 161 YS2-7e01.p1k chr02 277 585 812323 812629 F 309 86.41 1289 reject_low 20 ALIGNMENT 24 YS2-7e01.p1k chr09 651 614 7418 7453 C 38 92.11 1289 reject_low 15 ALIGNMENT 0 YS2-7e01.p1k chr11 586 882 665798 665797 F 297 0.00 1289 reject_low 11 ALIGNMENT 222 YS2-7e01.p1k chr09 277 580 439013 439316 F 304 93.09 1289 reject_low 7 ALIGNMENT 205 YS2-7e01.p1k chr03 248 585 315698 316035 F 338 88.76 1289 reject_low 8 ALIGNMENT 23 YS2-7e01.p1k chr07 624 651 1083976 1084002 F 28 96.43 1289 reject_low 21 ALIGNMENT 0 YS2-7e01.p1k chr14 62 247 783197 783196 F 186 0.00 1289 reject_low 5 ALIGNMENT 25 YS2-7e02.p1k chr01 696 728 31490 31522 F 33 100.00 1366 reject_low 1 ALIGNMENT 0 YS2-7e02.p1k chr09 697 62 350052 350051 C 636 0.00 1366 reject_low 3 ALIGNMENT 951 YS2-7e02.p1k chr10 30 1183 639227 640408 F 1154 94.54 1366 accept 0 ALIGNMENT 0 YS2-7e02.p1k chr09 913 727 350024 350023 C 187 0.00 1366 reject_low 3 ALIGNMENT 0 YS2-7e02.p1k chr15 913 724 301295 301294 C 190 0.00 1366 reject_low 2 ALIGNMENT 0 YS2-7e02.p1k chr15 694 62 301323 301322 C 633 0.00 1366 reject_low 2 ALIGNMENT 0 YS2-7e02.p1k chr01 62 695 31490 31489 F 634 0.00 1366 reject_low 1 ALIGNMENT 1019 YS2-7e02.q1k chr10 1211 41 640346 641530 C 1171 96.24 1335 accept 0 ALIGNMENT 22 YS2-7e02.p1k chr15 723 695 301294 301322 C 29 100.00 1366 reject_low 2 ALIGNMENT 0 YS2-7e02.p1k chr01 729 913 31522 31521 F 185 0.00 1366 reject_low 1 ALIGNMENT 22 YS2-7e02.p1k chr09 726 698 350023 350051 C 29 100.00 1366 reject_low 3 ALIGNMENT 41 YS2-7e03.q1k vc_3 336 296 2472 2512 C 41 100.00 336 reject_low 3 ALIGNMENT 0 YS2-7e03.q1k vc_7 62 298 13525 13524 F 237 0.00 336 reject_low 6 ALIGNMENT 0 YS2-7e03.p1k chr12 300 314 289238 289237 F 15 0.00 314 accept_chi 1 ALIGNMENT 0 YS2-7e03.q1k vc_4 62 295 5831 5830 F 234 0.00 336 reject_low 4 ALIGNMENT 0 YS2-7e03.q1k vc_5 297 62 5064 5063 C 236 0.00 336 reject_low 5 ALIGNMENT 0 YS2-7e03.q1k vc_5 297 62 37 36 C 236 0.00 336 reject_low 7 ALIGNMENT 38 YS2-7e03.q1k vc_7 299 336 13525 13562 F 38 100.00 336 reject_low 6 ALIGNMENT 41 YS2-7e03.q1k vc_1 336 296 2472 2512 C 41 100.00 336 reject_low 2 ALIGNMENT 36 YS2-7e03.q1k vc_5 333 298 1 36 C 36 100.00 336 reject_low 7 ALIGNMENT 0 YS2-7e03.q1k chr12 336 296 288971 288970 C 41 0.00 336 accept_chi 0 ALIGNMENT 245 YS2-7e03.p1k chr12 32 299 288970 289238 F 268 98.13 314 accept_chi 1 ALIGNMENT 41 YS2-7e03.q1k vc_4 296 336 5831 5871 F 41 100.00 336 reject_low 4 ALIGNMENT 0 YS2-7e03.q1k vc_3 295 62 2513 2512 C 234 0.00 336 reject_low 3 ALIGNMENT 257 YS2-7e03.q1k chr12 295 31 288970 289234 C 265 100.00 336 accept_chi 0 ALIGNMENT 39 YS2-7e03.q1k vc_5 336 298 5025 5063 C 39 100.00 336 reject_low 5 ALIGNMENT 0 YS2-7e03.q1k vc_1 295 62 2513 2512 C 234 0.00 336 reject_low 2 ALIGNMENT 860 YS2-7e04.p1k chr13 30 1045 310830 311865 F 1016 97.05 1304 accept 0 ALIGNMENT 968 YS2-7e04.q1k chr13 1147 38 311719 312845 C 1110 97.03 1316 accept 0 ALIGNMENT 1001 YS2-7e06.p1k chr02 37 1200 116319 117499 F 1164 95.70 1375 accept 0 ALIGNMENT 1002 YS2-7e06.q1k chr02 1243 41 119156 120362 C 1203 96.18 1407 accept 0 ALIGNMENT 868 YS2-7e07.q1k chr10 31 1022 494123 495130 F 992 96.98 1324 accept 0 ALIGNMENT 993 YS2-7e07.p1k chr10 1155 32 497467 498595 C 1124 96.80 1333 accept 0 ALIGNMENT 897 YS2-7e08.p1k chr10 1058 29 497549 498595 C 1030 96.89 1282 accept 0 ALIGNMENT 923 YS2-7e08.q1k chr10 34 1174 494123 495264 F 1141 94.39 1385 accept 0 ALIGNMENT 952 YS2-7e09.q1k chr13 39 1149 262136 263254 F 1111 95.95 1373 accept 0 ALIGNMENT 921 YS2-7e09.p1k chr13 1110 39 265778 266863 C 1072 96.92 1301 accept 0 ALIGNMENT 994 YS2-7e10.p1k chr05 30 1100 237150 238225 F 1071 98.60 1332 accept 0 ALIGNMENT 1005 YS2-7e10.q1k chr05 1286 40 239670 240932 C 1247 93.91 1434 accept 0 ALIGNMENT 233 YS2-7e11.p1k vc_5 52 355 3906 4210 F 304 91.78 1379 reject_low 14 ALIGNMENT 239 YS2-7e11.p1k vc_2 812 375 1666 2103 C 438 85.39 1379 reject_low 3 ALIGNMENT 239 YS2-7e11.p1k vc_7 375 812 102 539 F 438 85.39 1379 reject_vc 1 ALIGNMENT 102 YS2-7e11.q1k vc_4 40 202 126 287 F 163 88.34 1022 reject_low 18 ALIGNMENT 0 YS2-7e11.p1k vc_5 356 422 4210 4209 F 67 0.00 1379 reject_low 14 ALIGNMENT 230 YS2-7e11.p1k vc_3 52 355 986 1290 F 304 91.45 1379 reject_low 13 ALIGNMENT 214 YS2-7e11.q1k vc_5 40 461 2398 2816 F 422 84.36 1022 reject_vc 0 ALIGNMENT 0 YS2-7e11.p1k vc_7 152 374 13564 13563 F 223 0.00 1379 reject_low 5 ALIGNMENT 0 YS2-7e11.p1k vc_3 374 152 2104 2103 C 223 0.00 1379 reject_low 4 ALIGNMENT 33 YS2-7e11.q1k vc_3 40 1 2472 2511 C 40 95.00 1022 reject_low 13 ALIGNMENT 158 YS2-7e11.p1k vc_1 52 265 8960 9174 F 214 90.65 1379 reject_low 19 ALIGNMENT 0 YS2-7e11.p1k vc_3 356 422 1290 1289 F 67 0.00 1379 reject_low 13 ALIGNMENT 0 YS2-7e11.p1k vc_4 191 374 3062 5872 F 184 0.00 1379 reject_low 6 ALIGNMENT 239 YS2-7e11.p1k vc_3 812 375 1666 2103 C 438 85.39 1379 reject_low 4 ALIGNMENT 158 YS2-7e11.p1k vc_3 52 265 8231 8445 F 214 90.65 1379 reject_low 21 ALIGNMENT 214 YS2-7e11.q1k vc_3 40 461 2531 2949 F 422 84.36 1022 reject_low 10 ALIGNMENT 207 YS2-7e11.q1k vc_4 461 40 5392 5812 C 422 83.89 1022 reject_low 7 ALIGNMENT 0 YS2-7e11.p1k vc_1 356 422 1290 1289 F 67 0.00 1379 reject_low 11 ALIGNMENT 0 YS2-7e11.p1k vc_3 266 422 8445 8444 F 157 0.00 1379 reject_low 21 ALIGNMENT 0 YS2-7e11.p1k vc_2 374 152 2104 2103 C 223 0.00 1379 reject_low 3 ALIGNMENT 33 YS2-7e11.q1k vc_1 40 1 2472 2511 C 40 95.00 1022 reject_low 11 ALIGNMENT 84 YS2-7e11.p1k vc_4 52 190 2922 3061 F 139 86.33 1379 reject_low 6,7 ALIGNMENT 0 YS2-7e11.p1k vc_7 422 356 14378 14377 C 67 0.00 1379 reject_low 17 ALIGNMENT 0 YS2-7e11.p1k vc_7 152 374 102 101 F 223 0.00 1379 reject_vc 1 ALIGNMENT 0 YS2-7e11.q1k vc_4 41 40 5872 6353 F 0 0.00 1022 reject_low 22 ALIGNMENT 230 YS2-7e11.p1k vc_2 52 355 986 1290 F 304 91.45 1379 reject_low 12 ALIGNMENT 33 YS2-7e11.q1k vc_2 40 1 2105 2144 C 40 95.00 1022 reject_low 12 ALIGNMENT 0 YS2-7e11.p1k vc_7 422 356 916 915 C 67 0.00 1379 reject_low 16 ALIGNMENT 214 YS2-7e11.q1k vc_2 40 461 2164 2582 F 422 84.36 1022 reject_low 9 ALIGNMENT 0 YS2-7e11.p1k vc_4 191 422 3061 3060 F 232 0.00 1379 reject_low 7 ALIGNMENT 232 YS2-7e11.p1k vc_6 355 61 4171 4465 C 295 92.20 1379 reject_low 15 ALIGNMENT 0 YS2-7e11.p1k vc_2 356 422 1290 1289 F 67 0.00 1379 reject_low 12 ALIGNMENT 214 YS2-7e11.q1k vc_7 461 40 2309 2727 C 422 84.36 1022 reject_vc 1 ALIGNMENT 158 YS2-7e11.p1k vc_2 52 265 8593 8807 F 214 90.65 1379 reject_low 20 ALIGNMENT 239 YS2-7e11.p1k vc_7 375 812 13564 14001 F 438 85.39 1379 reject_low 5 ALIGNMENT 32 YS2-7e11.q1k vc_5 40 2 5025 5063 C 39 94.87 1022 reject_low 14 ALIGNMENT 230 YS2-7e11.p1k vc_7 355 52 915 1219 C 304 91.45 1379 reject_low 16 ALIGNMENT 24 YS2-7e11.p1k vc_1 403 375 2441 2470 C 29 96.55 1379 reject_low 25 ALIGNMENT 0 YS2-7e11.p1k vc_3 374 152 2471 2470 C 223 0.00 1379 reject_low 26 ALIGNMENT 230 YS2-7e11.p1k vc_1 52 355 986 1290 F 304 91.45 1379 reject_low 11 ALIGNMENT 33 YS2-7e11.q1k vc_4 1 40 5832 5871 F 40 95.00 1022 reject_low 22 ALIGNMENT 61 YS2-7e11.q1k vc_4 126 40 1449 1534 C 87 91.95 1022 reject_low 23 ALIGNMENT 239 YS2-7e11.p1k vc_1 812 375 1666 2103 C 438 85.39 1379 reject_low 2 ALIGNMENT 0 YS2-7e11.p1k vc_1 266 422 9174 9173 F 157 0.00 1379 reject_low 19 ALIGNMENT 0 YS2-7e11.p1k vc_5 374 152 5024 5023 C 223 0.00 1379 reject_vc 0 ALIGNMENT 220 YS2-7e11.p1k vc_7 355 70 14377 14662 C 286 91.61 1379 reject_low 17 ALIGNMENT 0 YS2-7e11.p1k vc_1 374 152 2471 2470 C 223 0.00 1379 reject_low 25 ALIGNMENT 0 YS2-7e11.p1k vc_6 422 356 4172 4171 C 67 0.00 1379 reject_low 15 ALIGNMENT 24 YS2-7e11.p1k vc_3 403 375 2441 2470 C 29 96.55 1379 reject_low 26 ALIGNMENT 0 YS2-7e11.p1k vc_2 266 422 8807 8806 F 157 0.00 1379 reject_low 20 ALIGNMENT 0 YS2-7e11.p1k vc_1 374 152 2104 2103 C 223 0.00 1379 reject_low 2 ALIGNMENT 0 YS2-7e11.p1k vc_3 422 404 2442 2441 C 19 0.00 1379 reject_low 26 ALIGNMENT 239 YS2-7e11.p1k vc_5 812 375 4586 5023 C 438 85.39 1379 reject_vc 0 ALIGNMENT 0 YS2-7e11.p1k vc_1 422 404 2442 2441 C 19 0.00 1379 reject_low 25 ALIGNMENT 30 YS2-7e11.q1k vc_5 37 2 1 36 C 36 94.44 1022 reject_low 24 ALIGNMENT 102 YS2-7e11.q1k vc_4 40 202 6353 6514 F 163 88.34 1022|1,0 reject_low 22 ALIGNMENT 214 YS2-7e11.q1k vc_1 40 461 2531 2949 F 422 84.36 1022 reject_low 8 ALIGNMENT 221 YS2-7e11.p1k vc_4 375 729 5873 6226 F 355 87.89 1379 reject_low 6 ALIGNMENT 128 YS2-7e12.p1k chr12 78 211 489348 489481 F 134 98.51 1377 reject_low 3 ALIGNMENT 0 YS2-7e12.p1k chr12 62 77 485696 485695 F 16 0.00 1377 reject_low 6 ALIGNMENT 0 YS2-7e12.p1k chr12 62 922 451419 451418 F 861 0.00 1377 reject_low 1 ALIGNMENT 0 YS2-7e12.p1k chr12 212 862 489481 489480 F 651 0.00 1377 reject_low 3 ALIGNMENT 1057 YS2-7e12.q1k chr12 1294 43 464183 465447 C 1252 95.93 1373 accept 0 ALIGNMENT 119 YS2-7e12.p1k chr12 78 196 485696 485814 F 119 100.00 1377 reject_low 6 ALIGNMENT 0 YS2-7e12.p1k chr12 197 862 468930 468929 F 666 0.00 1377 reject_low 2 ALIGNMENT 0 YS2-7e12.p1k chr12 197 862 485814 485813 F 666 0.00 1377 reject_low 6 ALIGNMENT 0 YS2-7e12.p1k chr12 197 862 482162 482161 F 666 0.00 1377 reject_low 5 ALIGNMENT 0 YS2-7e12.p1k chr12 197 862 472582 472581 F 666 0.00 1377 reject_low 4 ALIGNMENT 1057 YS2-7e12.q1k chr12 1294 43 455046 456310 C 1252 95.93 1373 reject_low 1 ALIGNMENT 0 YS2-7e12.p1k chr12 62 77 489348 489347 F 16 0.00 1377 reject_low 3 ALIGNMENT 111 YS2-7e12.p1k chr12 923 1072 451419 451568 F 150 90.67 1377 reject_low 1 ALIGNMENT 0 YS2-7e12.p1k chr12 62 77 482044 482043 F 16 0.00 1377 reject_low 5 ALIGNMENT 119 YS2-7e12.p1k chr12 78 196 472464 472582 F 119 100.00 1377 reject_low 4 ALIGNMENT 119 YS2-7e12.p1k chr12 78 196 482044 482162 F 119 100.00 1377 reject_low 5 ALIGNMENT 0 YS2-7e12.p1k chr12 62 77 472464 472463 F 16 0.00 1377 reject_low 4 ALIGNMENT 165 YS2-7e12.p1k chr12 28 196 468761 468930 F 169 99.41 1377 reject_low 2 ALIGNMENT 814 YS2-7e12.p1k chr12 28 1072 459624 460705 F 1045 93.78 1377 accept 0 ALIGNMENT 0 YS2-7e13.p1k chr05 881 823 135418 135417 C 59 0.00 1303 reject_low 4 ALIGNMENT 0 YS2-7e13.p1k chr06 735 62 226755 226754 C 674 0.00 1303 reject_low 7 ALIGNMENT 0 YS2-7e13.p1k chr04 62 740 1201739 1201738 F 679 0.00 1303 reject_low 12 ALIGNMENT 0 YS2-7e13.p1k chr07 825 881 122356 122355 F 57 0.00 1303 reject_low 9 ALIGNMENT 0 YS2-7e13.p1k chr07 837 881 876496 876495 F 45 0.00 1303 reject_low 1 ALIGNMENT 80 YS2-7e13.p1k chr16 741 823 582058 582140 F 83 98.80 1303 reject_low 6 ALIGNMENT 80 YS2-7e13.p1k chr05 822 737 435740 435825 C 86 97.67 1303 reject_low 5 ALIGNMENT 77 YS2-7e13.p1k chr07 823 741 185711 185793 C 83 97.59 1303 reject_low 11 ALIGNMENT 0 YS2-7e13.p1k chr09 740 62 300300 300299 C 679 0.00 1303 reject_low 13 ALIGNMENT 0 YS2-7e13.p1k chr04 815 881 1201812 1201811 F 67 0.00 1303 reject_low 12 ALIGNMENT 71 YS2-7e13.p1k chr06 815 736 226675 226754 C 80 97.50 1303 reject_low 7 ALIGNMENT 71 YS2-7e13.p1k chr09 822 741 300219 300299 C 82 96.34 1303 reject_low 13 ALIGNMENT 0 YS2-7e13.p1k chr07 881 824 185712 185711 C 58 0.00 1303 reject_low 11 ALIGNMENT 81 YS2-7e13.p1k chr03 823 736 151272 151360 C 88 97.73 1303 reject_low 3 ALIGNMENT 82 YS2-7e13.p1k chr05 822 738 135417 135501 C 85 98.82 1303 reject_low 4 ALIGNMENT 870 YS2-7e13.q1k chr11 1019 41 207041 208033 C 979 97.45 1288 accept 0 ALIGNMENT 0 YS2-7e13.p1k chr07 740 62 185794 185793 C 679 0.00 1303 reject_low 11 ALIGNMENT 0 YS2-7e13.p1k chr11 730 729 202288 202632 F 0 0.00 1303 accept 0 ALIGNMENT 0 YS2-7e13.p1k chr13 881 825 480612 480611 C 57 0.00 1303 reject_low 10 ALIGNMENT 75 YS2-7e13.p1k chr10 741 825 414880 414964 F 85 96.47 1303 reject_low 8 ALIGNMENT 0 YS2-7e13.p1k chr16 824 881 582140 582139 F 58 0.00 1303 reject_low 6 ALIGNMENT 0 YS2-7e13.p1k chr09 881 823 300220 300219 C 59 0.00 1303 reject_low 13 ALIGNMENT 0 YS2-7e13.p1k chr07 62 740 876398 876397 F 679 0.00 1303 reject_low 1 ALIGNMENT 0 YS2-7e13.p1k chr10 826 881 414964 414963 F 56 0.00 1303 reject_low 8 ALIGNMENT 0 YS2-7e13.p1k chr05 736 62 435826 435825 C 675 0.00 1303 reject_low 5 ALIGNMENT 0 YS2-7e13.p1k chr07 62 740 122272 122271 F 679 0.00 1303 reject_low 9 ALIGNMENT 0 YS2-7e13.p1k chr10 62 740 414880 414879 F 679 0.00 1303 reject_low 8 ALIGNMENT 0 YS2-7e13.p1k chr05 737 62 135502 135501 C 676 0.00 1303 reject_low 4 ALIGNMENT 76 YS2-7e13.p1k chr13 824 741 480611 480693 C 84 97.62 1303 reject_low 10 ALIGNMENT 0 YS2-7e13.p1k chr03 881 824 151273 151272 C 58 0.00 1303 reject_low 3 ALIGNMENT 82 YS2-7e13.p1k chr04 828 741 1352442 1352529 C 88 97.73 1303 reject_low 2 ALIGNMENT 76 YS2-7e13.p1k chr07 741 824 122272 122356 F 84 97.62 1303 reject_low 9 ALIGNMENT 0 YS2-7e13.p1k chr04 740 62 1352530 1352529 C 679 0.00 1303 reject_low 2 ALIGNMENT 74 YS2-7e13.p1k chr04 741 814 1201739 1201812 F 74 100.00 1303 reject_low 12 ALIGNMENT 0 YS2-7e13.p1k chr16 62 740 582058 582057 F 679 0.00 1303 reject_low 6 ALIGNMENT 0 YS2-7e13.p1k chr03 735 62 151361 151360 C 674 0.00 1303 reject_low 3 ALIGNMENT 0 YS2-7e13.p1k chr04 881 829 1352443 1352442 C 53 0.00 1303 reject_low 2 ALIGNMENT 0 YS2-7e13.p1k chr06 881 816 226676 226675 C 66 0.00 1303 reject_low 7 ALIGNMENT 631 YS2-7e13.p1k chr11 28 731 201584 202289 F 704 98.01 1303|0,2 accept 0 ALIGNMENT 333 YS2-7e13.p1k chr11 727 1177 202630 203085 F 451 92.02 1303|3,0 accept 0 ALIGNMENT 83 YS2-7e13.p1k chr07 741 836 876398 876496 F 96 95.83 1303 reject_low 1 ALIGNMENT 0 YS2-7e13.p1k chr13 740 62 480694 480693 C 679 0.00 1303 reject_low 10 ALIGNMENT 0 YS2-7e13.p1k chr05 881 823 435741 435740 C 59 0.00 1303 reject_low 5 ALIGNMENT 950 YS2-7e14.q1k chr14 36 1160 203783 204917 F 1125 95.11 1337 accept 0 ALIGNMENT 1060 YS2-7e14.p1k chr14 1289 32 204354 205607 C 1258 95.15 1445 accept 0 ALIGNMENT 915 YS2-7e17.q1k chr10 1061 30 685622 686665 C 1032 97.58 1291 accept 0 ALIGNMENT 1018 YS2-7e17.p1k chr10 65 1183 680404 681532 F 1119 97.68 1345 accept 0 ALIGNMENT 1000 YS2-7e18.q1k chr07 30 1176 601657 602817 F 1147 97.38 1345 accept 0 ALIGNMENT 995 YS2-7e18.p1k chr07 1145 30 605689 606815 C 1116 97.31 1319 accept 0 ALIGNMENT 20 YS2-7e19.q1k chr13 744 700 587656 587700 C 45 95.56 1338 reject_low 4 ALIGNMENT 24 YS2-7e19.q1k chr13 699 742 238330 238373 F 44 97.73 1338 reject_low 3 ALIGNMENT 0 YS2-7e19.q1k chr13 885 739 587630 587629 C 147 0.00 1338 reject_low 5 ALIGNMENT 0 YS2-7e19.q1k chr09 62 698 105767 105766 F 637 0.00 1338 reject_low 2 ALIGNMENT 0 YS2-7e19.q1k chr07 688 62 431467 431466 C 627 0.00 1338 reject_low 1 ALIGNMENT 0 YS2-7e19.q1k chr13 699 62 587668 587667 C 638 0.00 1338 reject_low 5 ALIGNMENT 0 YS2-7e19.q1k chr13 699 62 587701 587700 C 638 0.00 1338 reject_low 4 ALIGNMENT 0 YS2-7e19.q1k chr09 760 885 105828 105827 F 126 0.00 1338 reject_low 2 ALIGNMENT 0 YS2-7e19.q1k chr13 62 698 238330 238329 F 637 0.00 1338 reject_low 3 ALIGNMENT 0 YS2-7e19.q1k chr13 885 745 587657 587656 C 141 0.00 1338 reject_low 4 ALIGNMENT 1012 YS2-7e19.p1k chr13 48 1203 667209 668377 F 1156 96.37 1312 accept 0 ALIGNMENT 0 YS2-7e19.q1k chr07 885 749 431409 431408 C 137 0.00 1338 reject_low 1 ALIGNMENT 20 YS2-7e19.q1k chr13 738 700 587629 587667 C 39 97.44 1338 reject_low 5 ALIGNMENT 0 YS2-7e19.q1k chr13 743 885 238373 238372 F 143 0.00 1338 reject_low 3 ALIGNMENT 22 YS2-7e19.q1k chr09 699 759 105767 105828 F 61 90.16 1338 reject_low 2 ALIGNMENT 24 YS2-7e19.q1k chr07 748 689 431408 431466 C 60 93.33 1338 reject_low 1 ALIGNMENT 1044 YS2-7e19.q1k chr13 1206 39 667784 668960 C 1168 97.26 1338 accept 0 ALIGNMENT 955 YS2-7e20.p1k chr08 28 1114 156854 157947 F 1087 97.42 1321 accept 0 ALIGNMENT 1018 YS2-7e20.q1k chr08 1191 41 161028 162187 C 1151 97.13 1330 accept 0 ALIGNMENT 439 YS2-7e21.p1k vc_1 607 1 1143 1749 C 607 90.94 666 reject_vc 3 ALIGNMENT 39 YS2-7e21.q1k vc_5 306 268 5025 5063 C 39 100.00 306 reject_low 11 ALIGNMENT 0 YS2-7e21.q1k vc_3 265 62 2513 2512 C 204 0.00 306 reject_low 9 ALIGNMENT 41 YS2-7e21.q1k vc_1 306 266 2472 2512 C 41 100.00 306 reject_low 8 ALIGNMENT 439 YS2-7e21.p1k vc_2 607 1 1143 1749 C 607 90.94 666 reject_vc 4 ALIGNMENT 433 YS2-7e21.p1k vc_7 1 607 13918 14524 F 607 90.44 666 reject_vc 7 ALIGNMENT 41 YS2-7e21.q1k vc_3 306 266 2472 2512 C 41 100.00 306 reject_low 9 ALIGNMENT 41 YS2-7e21.q1k vc_4 266 306 5831 5871 F 41 100.00 306 reject_low 10 ALIGNMENT 0 YS2-7e21.q1k vc_5 267 62 37 36 C 206 0.00 306 reject_low 13 ALIGNMENT 433 YS2-7e21.p1k vc_7 1 607 456 1062 F 607 90.44 666 reject_vc 6 ALIGNMENT 228 YS2-7e21.q1k chr03 30 265 17422 17657 F 236 99.15 306 accept_tel 0 ALIGNMENT 0 YS2-7e21.q1k vc_1 265 62 2513 2512 C 204 0.00 306 reject_low 8 ALIGNMENT 36 YS2-7e21.q1k vc_5 303 268 1 36 C 36 100.00 306 reject_low 13 ALIGNMENT 0 YS2-7e21.q1k vc_4 62 265 5831 5830 F 204 0.00 306 reject_low 10 ALIGNMENT 38 YS2-7e21.q1k vc_7 269 306 13525 13562 F 38 100.00 306 reject_low 12 ALIGNMENT 442 YS2-7e21.p1k vc_5 607 1 4063 4669 C 607 91.10 666 reject_vc 1 ALIGNMENT 439 YS2-7e21.p1k vc_3 607 1 1143 1749 C 607 90.94 666 reject_vc 5 ALIGNMENT 442 YS2-7e21.p1k vc_6 1 607 3712 4318 F 607 90.94 666 reject_vc 2 ALIGNMENT 0 YS2-7e21.q1k vc_5 267 62 5064 5063 C 206 0.00 306 reject_low 11 ALIGNMENT 0 YS2-7e21.q1k vc_7 62 268 13525 13524 F 207 0.00 306 reject_low 12 ALIGNMENT 0 YS2-7e21.q1k chr03 266 306 17657 17656 F 41 0.00 306 accept_tel 0 ALIGNMENT 277 YS2-7e22.q1k chr11 815 1240 514226 514659 F 426 89.67 1276|2,0 accept 0 ALIGNMENT 20 YS2-7e22.p1k chr07 1141 1102 881200 881239 C 40 82.50 1330 reject_low 2 ALIGNMENT 749 YS2-7e22.q1k chr11 37 818 513412 514191 F 782 99.36 1276|0,2 accept 0 ALIGNMENT 0 YS2-7e22.p1k chr07 1101 152 881240 881239 C 950 0.00 1330 reject_low 2 ALIGNMENT 0 YS2-7e22.q1k chr11 817 816 514190 514227 F 0 0.00 1276 accept 0 ALIGNMENT 0 YS2-7e22.q1k chr07 898 113 327926 327925 C 786 0.00 1276 reject_low 1 ALIGNMENT 30 YS2-7e22.q1k chr07 112 42 327925 327995 C 71 83.10 1276 reject_low 1 ALIGNMENT 956 YS2-7e22.p1k chr11 1277 92 515335 516532 C 1186 94.60 1330 accept 0 ALIGNMENT 46 YS2-7e23.q1k vc_4 407 325 1452 1534 C 83 85.54 1305 reject_low 8 ALIGNMENT 0 YS2-7e23.q1k vc_4 324 324 5870 6352 F 1 0.00 1305 reject_low 5 ALIGNMENT 53 YS2-7e23.q1k vc_4 791 1001 1882 2089 F 211 76.78 1305 reject_low 4 ALIGNMENT 176 YS2-7e23.q1k vc_1 325 751 2531 2956 F 427 80.80 1305 reject_low 2 ALIGNMENT 133 YS2-7e23.q1k chr03 98 284 17471 17657 F 187 90.37 1305 accept_tel 0 ALIGNMENT 30 YS2-7e23.q1k vc_1 323 285 2474 2512 C 39 92.31 1305 reject_low 6 ALIGNMENT 77 YS2-7e23.q1k vc_4 325 486 6353 6514 F 162 82.72 1305 reject_low 5 ALIGNMENT 204 YS2-7e23.q1k vc_4 896 325 5237 5812 C 572 79.20 1305 reject_low 1 ALIGNMENT 0 YS2-7e23.q1k vc_4 487 790 288 1881 F 304 0.00 1305 reject_low 4 ALIGNMENT 77 YS2-7e23.q1k vc_4 325 486 126 287 F 162 82.72 1305 reject_low 4 ALIGNMENT 30 YS2-7e23.q1k vc_2 323 285 2107 2145 C 39 92.31 1305 reject_low 7 ALIGNMENT 176 YS2-7e23.q1k vc_2 325 751 2164 2589 F 427 80.80 1305 reject_low 3 ALIGNMENT 30 YS2-7e23.q1k vc_4 285 323 5831 5869 F 39 92.31 1305 reject_low 5 ALIGNMENT 512 YS2-7f01.q1k chr04 842 16 759851 760668 C 827 89.00 1291 accept 0 ALIGNMENT 966 YS2-7f02.p1k chr13 29 1078 224426 225488 F 1050 98.19 1271 accept 0 ALIGNMENT 49 YS2-7f02.q1k chr13 88 37 225776 225827 C 52 100.00 111 accept 0 ALIGNMENT 1001 YS2-7f03.p1k chr04 39 1178 753805 754953 F 1140 96.49 1362 accept 0 ALIGNMENT 926 YS2-7f03.q1k chr04 1163 43 759567 760700 C 1121 94.92 1352 accept 0 ALIGNMENT 36 YS2-7f04.q1k chr04 33 75 627917 627960 F 43 97.67 100 accept 0 ALIGNMENT 990 YS2-7f04.p1k chr04 1120 29 630377 631472 C 1092 97.44 1364 accept 0 ALIGNMENT 360 YS2-7f05.q1k chr05 47 724 528544 529219 F 678 85.99 1363 accept_chi 2 ALIGNMENT 0 YS2-7f05.p1k vc_6 846 797 5264 5263 C 50 0.00 1303 reject_low 1 ALIGNMENT 21 YS2-7f05.p1k scplasm1 47 27 1 21 C 21 100.00 1303 reject_low 3 ALIGNMENT 734 YS2-7f05.p1k vc_6 796 27 5263 6032 C 770 99.48 1303 reject_low 1 ALIGNMENT 842 YS2-7f05.p1k scplasm1 1013 48 5336 6318 C 966 97.00 1303 accept_chi 0 ALIGNMENT 0 YS2-7f05.p1k scplasm1 846 48 2 1 C 799 0.00 1303 reject_low 3 ALIGNMENT 504 YS2-7f06.p1k chr16 27 704 849065 849743 F 678 93.07 705 ambiguous_trans 21 ALIGNMENT 631 YS2-7f06.p1k chr15 705 27 704651 705330 C 679 99.26 705 ambiguous_trans 10 ALIGNMENT 523 YS2-7f06.p1k chr10 27 705 477031 477710 F 679 93.96 705 ambiguous_trans 19 ALIGNMENT 607 YS2-7f06.p1k chr14 27 705 523796 524475 F 679 98.09 705 ambiguous_trans 14 ALIGNMENT 51 YS2-7f06.q1k chr12 38 92 164865 164919 F 55 98.18 113 accept 0 ALIGNMENT 469 YS2-7f06.p1k chr05 705 27 443984 444663 C 679 91.31 705 ambiguous_trans 23 ALIGNMENT 396 YS2-7f06.p1k chr05 704 27 493084 493762 C 678 87.76 705 ambiguous_trans 25 ALIGNMENT 631 YS2-7f06.p1k chr04 705 27 514271 514950 C 679 99.26 705 ambiguous_trans 8 ALIGNMENT 640 YS2-7f06.p1k chr07 705 27 569331 570010 C 679 99.71 705 ambiguous_trans 3 ALIGNMENT 577 YS2-7f06.p1k chr07 705 27 562435 563114 C 679 96.61 705 ambiguous_trans 16 ALIGNMENT 640 YS2-7f06.p1k chr06 27 705 142601 143280 F 679 99.71 705 ambiguous_trans 2 ALIGNMENT 628 YS2-7f06.p1k chr12 27 705 945882 946561 F 679 99.12 705 ambiguous_trans 12 ALIGNMENT 577 YS2-7f06.p1k chr16 705 27 805229 805908 C 679 96.61 705 ambiguous_trans 18 ALIGNMENT 498 YS2-7f06.p1k chr16 704 27 851218 851896 C 678 92.77 705 ambiguous_trans 22 ALIGNMENT 637 YS2-7f06.p1k chr14 705 27 562620 563299 C 679 99.56 705 ambiguous_trans 5 ALIGNMENT 469 YS2-7f06.p1k chr13 27 705 200985 201664 F 679 91.31 705 ambiguous_trans 24 ALIGNMENT 634 YS2-7f06.p1k chr04 705 27 646085 646764 C 679 99.41 705 ambiguous_trans 6 ALIGNMENT 640 YS2-7f06.p1k chr03 27 705 89503 90182 F 679 99.71 705 ambiguous_trans 1 ALIGNMENT 504 YS2-7f06.p1k chr13 27 704 188818 189496 F 678 93.07 705 ambiguous_trans 20 ALIGNMENT 631 YS2-7f06.p1k chr02 27 705 34334 35013 F 679 99.26 705 ambiguous_trans 7 ALIGNMENT 619 YS2-7f06.p1k chr04 705 27 878886 879565 C 679 98.67 705 ambiguous_trans 13 ALIGNMENT 631 YS2-7f06.p1k chr04 27 705 876509 877188 F 679 99.26 705 ambiguous_trans 9 ALIGNMENT 640 YS2-7f06.p1k chr07 27 705 816145 816824 F 679 99.71 705 ambiguous_trans 4 ALIGNMENT 631 YS2-7f06.p1k chr15 27 705 974975 975654 F 679 99.26 705 ambiguous_trans 11 ALIGNMENT 270 YS2-7f06.p1k chr10 25 546 482613 483135 F 522 85.82 705 ambiguous_trans 26 ALIGNMENT 567 YS2-7f06.p1k chr12 25 705 655476 656157 F 681 96.04 705 ambiguous_trans 15 ALIGNMENT 577 YS2-7f06.p1k chr12 27 705 597797 598476 F 679 96.61 705 ambiguous_trans 17 ALIGNMENT 0 YS2-7f06.p1k chr10 547 705 483135 483134 F 159 0.00 705 ambiguous_trans 26 ALIGNMENT 929 YS2-7f07.q1k chr05 34 1159 528532 529662 F 1126 94.85 1409 accept 0 ALIGNMENT 762 YS2-7f07.p1k chr05 1035 74 532579 533553 C 962 94.59 1315 accept 0 ALIGNMENT 51 YS2-7f08.q1k chr12 40 95 460525 460580 F 56 98.21 117 accept 0 ALIGNMENT 1019 YS2-7f08.p1k chr12 1205 29 454676 455873 C 1177 96.35 1357 reject_low 1 ALIGNMENT 1019 YS2-7f08.p1k chr12 1205 29 463813 465010 C 1177 96.35 1357 accept 0 ALIGNMENT 1026 YS2-7f10.p1k chr12 1153 29 455633 456759 C 1125 97.51 1359 accept 0 ALIGNMENT 1026 YS2-7f10.p1k chr12 1153 29 464770 465896 C 1125 97.51 1359 accept 1 ALIGNMENT 197 YS2-7f11.q1k chr11 283 39 83780 84023 C 245 95.92 323 accept_chi 1 ALIGNMENT 0 YS2-7f11.q1k vc_1 282 62 2513 2512 C 221 0.00 323 reject_low 2 ALIGNMENT 0 YS2-7f11.q1k vc_3 282 62 2513 2512 C 221 0.00 323 reject_low 4 ALIGNMENT 38 YS2-7f11.q1k vc_7 286 323 13525 13562 F 38 100.00 323 reject_low 7 ALIGNMENT 0 YS2-7f11.q1k vc_5 284 62 5064 5063 C 223 0.00 323 reject_low 6 ALIGNMENT 0 YS2-7f11.q1k vc_5 284 62 37 36 C 223 0.00 323 reject_low 8 ALIGNMENT 0 YS2-7f11.q1k vc_4 62 282 5831 5830 F 221 0.00 323 reject_low 5 ALIGNMENT 0 YS2-7f11.q1k vc_2 282 62 2146 2145 C 221 0.00 323 reject_low 3 ALIGNMENT 41 YS2-7f11.q1k vc_3 323 283 2472 2512 C 41 100.00 323 reject_low 4 ALIGNMENT 41 YS2-7f11.q1k vc_1 323 283 2472 2512 C 41 100.00 323 reject_low 2 ALIGNMENT 36 YS2-7f11.q1k vc_5 320 285 1 36 C 36 100.00 323 reject_low 8 ALIGNMENT 0 YS2-7f11.p1k chr11 274 292 84023 84022 F 19 0.00 292 accept_chi 0 ALIGNMENT 41 YS2-7f11.q1k vc_4 283 323 5831 5871 F 41 100.00 323 reject_low 5 ALIGNMENT 197 YS2-7f11.p1k chr11 29 273 83780 84023 F 245 95.92 292 accept_chi 0 ALIGNMENT 41 YS2-7f11.q1k vc_2 323 283 2105 2145 C 41 100.00 323 reject_low 3 ALIGNMENT 0 YS2-7f11.q1k chr11 323 284 83781 83780 C 40 0.00 323 accept_chi 1 ALIGNMENT 39 YS2-7f11.q1k vc_5 323 285 5025 5063 C 39 100.00 323 reject_low 6 ALIGNMENT 0 YS2-7f11.q1k vc_7 62 285 13525 13524 F 224 0.00 323 reject_low 7 ALIGNMENT 54 YS2-7f12.q1k chr13 84 30 490126 490180 C 55 100.00 111 accept 0 ALIGNMENT 0 YS2-7f12.p1k chr13 255 273 490180 490179 F 19 0.00 273 accept 0 ALIGNMENT 185 YS2-7f12.p1k chr13 69 254 489995 490180 F 186 100.00 273 accept 0 ALIGNMENT 1038 YS2-7f13.q1k chr08 1208 30 439350 440534 C 1179 97.37 1353 accept 0 ALIGNMENT 41 YS2-7f16.q1k chr04 40 88 617449 617498 F 49 97.96 115 accept 0 ALIGNMENT 859 YS2-7f16.p1k chr04 1024 37 621604 622610 C 988 97.27 1291 accept 0 ALIGNMENT 1023 YS2-7f17.q1k chr07 41 1229 804161 805358 F 1189 96.89 1377 accept 0 ALIGNMENT 920 YS2-7f17.p1k chr07 1173 57 807863 808992 C 1117 95.17 1338 accept 0 ALIGNMENT 976 YS2-7f18.p1k chr04 30 1144 697979 699108 F 1115 96.77 1353 accept 0 ALIGNMENT 51 YS2-7f18.q1k chr04 82 29 700462 700515 C 54 100.00 105 accept 0 ALIGNMENT 797 YS2-7f20.p1k chr14 242 1154 84063 84976 F 913 97.26 1399 accept 0 ALIGNMENT 1036 YS2-7f21.p1k chr12 1238 31 455546 456759 C 1208 96.03 1281 accept 0 ALIGNMENT 0 YS2-7f21.q1k chr12 685 877 490543 490542 F 193 0.00 1262 reject_low 2 ALIGNMENT 1058 YS2-7f21.q1k chr12 34 1256 451925 453164 F 1223 96.16 1262 accept 0 ALIGNMENT 1058 YS2-7f21.q1k chr12 34 1256 461062 462301 F 1223 96.16 1262 accept 1 ALIGNMENT 1036 YS2-7f21.p1k chr12 1238 31 464683 465896 C 1208 96.03 1281 accept 1 ALIGNMENT 640 YS2-7f21.q1k chr12 34 684 489893 490543 F 651 99.54 1262 reject_low 2 ALIGNMENT 60 YS2-7f23.q1k chr16 164 46 8593 8711 C 119 84.03 212 ambiguous_tel 19 ALIGNMENT 0 YS2-7f23.q1k vc_7 62 174 13525 13524 F 113 0.00 212 reject_vc 6 ALIGNMENT 39 YS2-7f23.q1k vc_5 212 174 5025 5063 C 39 100.00 212 reject_vc 5 ALIGNMENT 0 YS2-7f23.q1k chr12 212 166 13732 13731 C 47 0.00 212 ambiguous_tel 16 ALIGNMENT 42 YS2-7f23.q1k vc_1 212 171 2472 2513 C 42 100.00 212 reject_vc 1 ALIGNMENT 86 YS2-7f23.q1k chr09 165 45 9440 9560 C 121 90.91 212 ambiguous_tel 12 ALIGNMENT 78 YS2-7f23.q1k chr12 165 45 13731 13853 C 121 89.26 212 ambiguous_tel 16 ALIGNMENT 0 YS2-7f23.q1k vc_5 173 62 37 36 C 112 0.00 212 reject_vc 8 ALIGNMENT 90 YS2-7f23.q1k chr07 165 45 6937 7056 C 121 92.56 212 ambiguous_tel 9 ALIGNMENT 0 YS2-7f23.q1k chr14 166 212 781632 781631 F 47 0.00 212 ambiguous_tel 4 ALIGNMENT 0 YS2-7f23.q1k chr08 212 165 12579 12578 C 48 0.00 212 ambiguous_tel 7 ALIGNMENT 38 YS2-7f23.q1k vc_7 175 212 13525 13562 F 38 100.00 212 reject_vc 6 ALIGNMENT 94 YS2-7f23.q1k chr08 164 45 12578 12697 C 120 93.33 212 ambiguous_tel 7 ALIGNMENT 0 YS2-7f23.q1k vc_5 173 62 5064 5063 C 112 0.00 212 reject_vc 5 ALIGNMENT 42 YS2-7f23.q1k vc_3 212 171 2472 2513 C 42 100.00 212 reject_vc 2 ALIGNMENT 0 YS2-7f23.q1k chr02 212 166 8255 8254 C 47 0.00 212 ambiguous_tel 11 ALIGNMENT 0 YS2-7f23.q1k chr16 212 165 8594 8593 C 48 0.00 212 ambiguous_tel 19 ALIGNMENT 60 YS2-7f23.q1k chr15 46 164 1082430 1082548 F 119 84.03 212 ambiguous_tel 18 ALIGNMENT 101 YS2-7f23.q1k chr01 171 45 2445 2571 C 127 93.70 212 ambiguous_tel 0 ALIGNMENT 0 YS2-7f23.q1k vc_1 170 62 2514 2513 C 109 0.00 212 reject_vc 1 ALIGNMENT 0 YS2-7f23.q1k chr01 212 172 2446 2445 C 41 0.00 212 ambiguous_tel 0 ALIGNMENT 0 YS2-7f23.q1k vc_3 170 62 2514 2513 C 109 0.00 212 reject_vc 2 ALIGNMENT 88 YS2-7f23.q1k chr02 165 45 8254 8376 C 121 91.74 212 ambiguous_tel 11 ALIGNMENT 81 YS2-7f23.q1k chr14 41 165 781508 781632 F 125 88.80 212 ambiguous_tel 4 ALIGNMENT 0 YS2-7f23.q1k chr15 165 212 1082548 1082547 F 48 0.00 212 ambiguous_tel 18 ALIGNMENT 0 YS2-7f23.q1k chr12 166 212 1062631 1062630 F 47 0.00 212 ambiguous_tel 17 ALIGNMENT 0 YS2-7f23.q1k chr11 212 166 2468 2467 C 47 0.00 212 ambiguous_tel 15 ALIGNMENT 36 YS2-7f23.q1k vc_5 209 174 1 36 C 36 100.00 212 reject_vc 8 ALIGNMENT 0 YS2-7f23.q1k chr09 212 166 9441 9440 C 47 0.00 212 ambiguous_tel 12 ALIGNMENT 90 YS2-7f23.q1k chr09 45 165 433521 433640 F 121 92.56 212 ambiguous_tel 10 ALIGNMENT 77 YS2-7f23.q1k chr12 45 165 1062513 1062631 F 121 89.26 212 ambiguous_tel 17 ALIGNMENT 0 YS2-7f23.q1k chr03 166 212 307511 307510 F 47 0.00 212 ambiguous_tel 14 ALIGNMENT 0 YS2-7f23.q1k chr09 166 212 433640 433639 F 47 0.00 212 ambiguous_tel 10 ALIGNMENT 86 YS2-7f23.q1k chr10 165 45 9423 9543 C 121 90.91 212 ambiguous_tel 13 ALIGNMENT 84 YS2-7f23.q1k chr11 165 45 2467 2586 C 121 90.91 212 ambiguous_tel 15 ALIGNMENT 84 YS2-7f23.q1k chr03 45 165 307389 307511 F 121 90.91 212 ambiguous_tel 14 ALIGNMENT 0 YS2-7f23.q1k chr07 212 166 6938 6937 C 47 0.00 212 ambiguous_tel 9 ALIGNMENT 42 YS2-7f23.q1k vc_4 171 212 5830 5871 F 42 100.00 212 reject_vc 3 ALIGNMENT 0 YS2-7f23.q1k vc_4 62 170 5830 5829 F 109 0.00 212 reject_vc 3 ALIGNMENT 0 YS2-7f23.q1k chr10 212 166 9424 9423 C 47 0.00 212 ambiguous_tel 13 ALIGNMENT 0 YS2-7f24.p1k vc_2 909 197 2106 2105 C 713 0.00 1293 reject_low 2 ALIGNMENT 43 YS2-7f24.q1k chr15 71 29 998798 998840 C 43 100.00 98 accept 0 ALIGNMENT 154 YS2-7f24.p1k vc_4 910 1144 5871 6111 F 235 89.79 1293 reject_low 4 ALIGNMENT 154 YS2-7f24.p1k vc_7 910 1144 100 340 F 235 89.79 1293 reject_low 6 ALIGNMENT 677 YS2-7f24.p1k chr15 128 891 998083 998840 F 764 97.51 1293 accept 0 ALIGNMENT 26 YS2-7f24.p1k vc_3 940 910 2441 2472 C 31 96.77 1293 reject_low 9 ALIGNMENT 0 YS2-7f24.p1k vc_1 909 197 2473 2472 C 713 0.00 1293 reject_low 8 ALIGNMENT 154 YS2-7f24.p1k vc_5 1144 910 4785 5025 C 235 89.79 1293 reject_low 5 ALIGNMENT 0 YS2-7f24.p1k vc_7 197 909 100 99 F 713 0.00 1293 reject_low 6 ALIGNMENT 0 YS2-7f24.p1k vc_7 197 909 13562 13561 F 713 0.00 1293 reject_low 7 ALIGNMENT 154 YS2-7f24.p1k vc_7 910 1144 13562 13802 F 235 89.79 1293 reject_low 7 ALIGNMENT 26 YS2-7f24.p1k vc_1 940 910 2441 2472 C 31 96.77 1293 reject_low 8 ALIGNMENT 0 YS2-7f24.p1k vc_3 909 197 2106 2105 C 713 0.00 1293 reject_low 3 ALIGNMENT 0 YS2-7f24.p1k vc_3 909 197 2473 2472 C 713 0.00 1293 reject_low 9 ALIGNMENT 0 YS2-7f24.p1k vc_1 909 197 2106 2105 C 713 0.00 1293 reject_low 1 ALIGNMENT 0 YS2-7f24.p1k vc_4 197 909 5871 5870 F 713 0.00 1293 reject_low 4 ALIGNMENT 154 YS2-7f24.p1k vc_2 1144 910 1865 2105 C 235 89.79 1293 reject_low 2 ALIGNMENT 0 YS2-7f24.p1k vc_5 909 197 5026 5025 C 713 0.00 1293 reject_low 5 ALIGNMENT 154 YS2-7f24.p1k vc_1 1144 910 1865 2105 C 235 89.79 1293 reject_low 1 ALIGNMENT 154 YS2-7f24.p1k vc_3 1144 910 1865 2105 C 235 89.79 1293 reject_low 3 ALIGNMENT 1016 YS2-7g01.q1k chr15 40 1241 546988 548193 F 1202 95.59 1347 accept 0 ALIGNMENT 975 YS2-7g01.p1k chr15 1156 31 551244 552388 C 1126 96.80 1279 accept 0 ALIGNMENT 0 YS2-7g02.q1k chrm 543 887 77099 77098 F 345 0.00 1226 reject_low 3 ALIGNMENT 0 YS2-7g02.p1k chrm 62 449 84178 84177 F 388 0.00 1243 reject_low 7 ALIGNMENT 0 YS2-7g02.p1k chrm 855 696 34287 34286 C 160 0.00 1243 reject_low 19 ALIGNMENT 0 YS2-7g02.q1k chrm 605 887 83420 83419 F 283 0.00 1226 reject_low 1 ALIGNMENT 0 YS2-7g02.p1k chrm 458 628 2607 2726 F 171 0.00 1243 reject_low 13 ALIGNMENT 0 YS2-7g02.p1k chrm 855 696 2095 2094 C 160 0.00 1243 reject_low 12 ALIGNMENT 20 YS2-7g02.q1k chrm 618 598 68646 68666 C 21 100.00 1226 reject_low 4 ALIGNMENT 0 YS2-7g02.p1k chrm 464 421 53750 53735 C 44 0.00 1243 reject_low 15 ALIGNMENT 0 YS2-7g02.q1k chrm 618 585 68636 68611 C 34 0.00 1226 reject_low 2 ALIGNMENT 48 YS2-7g02.p1k chrm 695 631 34286 34351 C 65 92.31 1243 reject_low 19 ALIGNMENT 0 YS2-7g02.p1k chrm 458 855 50776 50775 F 398 0.00 1243 reject_low 5 ALIGNMENT 0 YS2-7g02.p1k chrm 855 696 83054 83053 C 160 0.00 1243 reject_low 11 ALIGNMENT 0 YS2-7g02.q1k chrm 62 473 83283 83282 F 412 0.00 1226 reject_low 1 ALIGNMENT 0 YS2-7g02.p1k chrm 651 421 44022 53735 C 231 0.00 1243 reject_low 22 ALIGNMENT 0 YS2-7g02.p1k chrm 630 479 34352 35111 C 152 0.00 1243 reject_low 19 ALIGNMENT 38 YS2-7g02.p1k chrm 705 652 43967 44021 C 54 90.74 1243 reject_low 22 ALIGNMENT 0 YS2-7g02.p1k chrm 480 458 34211 34192 C 23 0.00 1243 reject_low 14 ALIGNMENT 0 YS2-7g02.p1k chrm 855 704 48094 48093 C 152 0.00 1243 reject_low 21 ALIGNMENT 0 YS2-7g02.p1k chrm 427 428 53729 44225 C 0 0.00 1243 reject_low 22 ALIGNMENT 35 YS2-7g02.p1k chrm 695 651 83053 83097 C 45 95.56 1243 reject_low 11 ALIGNMENT 33 YS2-7g02.p1k chrm 695 653 2094 2136 C 43 95.35 1243 reject_low 12 ALIGNMENT 0 YS2-7g02.p1k chrm 855 705 29831 29830 C 151 0.00 1243 reject_low 14 ALIGNMENT 0 YS2-7g02.p1k chrm 855 696 84488 84487 C 160 0.00 1243 reject_low 1,3 ALIGNMENT 38 YS2-7g02.q1k chrm 495 542 77053 77099 F 48 95.83 1226 reject_low 3 ALIGNMENT 0 YS2-7g02.q1k chrm 597 62 68667 68666 C 536 0.00 1226 reject_low 4 ALIGNMENT 0 YS2-7g02.p1k chrm 642 62 66879 66878 C 581 0.00 1243 reject_low 8 ALIGNMENT 23 YS2-7g02.p1k chrm 450 478 2537 2565 F 29 93.10 1243 reject_low 6 ALIGNMENT 62 YS2-7g02.q1k chrm 474 604 83283 83420 F 131 83.21 1226 reject_low 1 ALIGNMENT 0 YS2-7g02.p1k chrm 650 62 83098 83097 C 589 0.00 1243 reject_low 11 ALIGNMENT 0 YS2-7g02.p1k chrm 62 406 84193 84192 F 345 0.00 1243 reject_low 17 ALIGNMENT 0 YS2-7g02.p1k chrm 398 62 44250 44249 C 337 0.00 1243 reject_low 18,19,20,22 ALIGNMENT 0 YS2-7g02.p1k chrm 652 62 2137 2136 C 591 0.00 1243 reject_low 12 ALIGNMENT 39 YS2-7g02.p1k chrm 693 641 53828 53882 C 53 92.45 1243 reject_low 9 ALIGNMENT 29 YS2-7g02.p1k chrm 497 460 35134 35171 C 38 92.11 1243|8,0 reject_low 18 ALIGNMENT 0 YS2-7g02.q1k chrm 887 650 68606 68605 C 238 0.00 1226 reject_low 2 ALIGNMENT 0 YS2-7g02.p1k chrm 458 855 84237 84236 F 398 0.00 1243 reject_low 17 ALIGNMENT 53 YS2-7g02.p1k chrm 695 639 84487 84543 C 57 98.25 1243 reject_low 1,3 ALIGNMENT 0 YS2-7g02.p1k chrm 855 498 53718 53717 C 358 0.00 1243 reject_low 15 ALIGNMENT 0 YS2-7g02.p1k chrm 432 431 84218 84212 F 0 0.00 1243 reject_low 17 ALIGNMENT 22 YS2-7g02.p1k chrm 454 400 47958 48007 C 55 87.27 1243|0,11 reject_low 16 ALIGNMENT 27 YS2-7g02.p1k chrm 407 457 2552 2606 F 51 88.24 1243 reject_low 13 ALIGNMENT 0 YS2-7g02.p1k chrm 62 396 50716 50715 F 335 0.00 1243 reject_low 5 ALIGNMENT 23 YS2-7g02.p1k chrm 407 431 84193 84217 F 25 100.00 1243 reject_low 17 ALIGNMENT 42 YS2-7g02.p1k chrm 646 695 71207 71256 F 50 96.00 1243 reject_low 10 ALIGNMENT 0 YS2-7g02.p1k chrm 410 411 47997 53745 C 0 0.00 1243 reject_low 16 ALIGNMENT 0 YS2-7g02.p1k chrm 648 552 29887 34137 C 97 0.00 1243 reject_low 14 ALIGNMENT 0 YS2-7g02.p1k chrm 479 855 2565 2564 F 377 0.00 1243 reject_low 6 ALIGNMENT 32 YS2-7g02.p1k chrm 478 440 35112 35150 C 39 94.87 1243|0,9 reject_low 19,20 ALIGNMENT 23 YS2-7g02.p1k chrm 450 478 84178 84206 F 29 93.10 1243 reject_low 7 ALIGNMENT 0 YS2-7g02.p1k chrm 458 421 53705 53735 C 38 0.00 1243 reject_low 21 ALIGNMENT 0 YS2-7g02.p1k chrm 632 479 34996 35111 C 154 0.00 1243 reject_low 20 ALIGNMENT 423 YS2-7g02.p1k chrm 1054 38 77299 78299 C 1017 88.69 1243 reject_bad_break 0 ALIGNMENT 59 YS2-7g02.p1k chrm 397 457 50716 50776 F 61 100.00 1243 reject_low 5 ALIGNMENT 184 YS2-7g02.q1k chrm 666 1019 77209 77572 F 354 92.94 1226 reject_bad_break 0 ALIGNMENT 0 YS2-7g02.p1k chrm 459 457 35172 44196 C 3 0.00 1243 reject_low 18 ALIGNMENT 0 YS2-7g02.p1k chrm 652 498 48144 53665 C 155 0.00 1243 reject_low 21 ALIGNMENT 27 YS2-7g02.p1k chrm 551 481 34138 34210 C 71 81.69 1243|0,9 reject_low 14,18 ALIGNMENT 0 YS2-7g02.p1k chrm 62 645 71207 71206 F 584 0.00 1243 reject_low 10 ALIGNMENT 38 YS2-7g02.p1k chrm 703 653 48093 48143 C 51 92.16 1243 reject_low 21 ALIGNMENT 0 YS2-7g02.p1k chrm 479 855 84206 84205 F 377 0.00 1243 reject_low 7 ALIGNMENT 47 YS2-7g02.p1k chrm 457 361 34193 34286 C 97 85.57 1243 reject_low 14 ALIGNMENT 0 YS2-7g02.p1k chrm 398 62 53758 53757 C 337 0.00 1243 reject_low 15,16,21 ALIGNMENT 42 YS2-7g02.p1k chrm 629 705 2727 2804 F 77 85.71 1243 reject_low 13 ALIGNMENT 0 YS2-7g02.p1k chrm 360 62 34287 34286 C 299 0.00 1243 reject_low 14 ALIGNMENT 37 YS2-7g02.q1k chrm 584 528 68612 68673 C 57 91.23 1226 reject_low 2 ALIGNMENT 0 YS2-7g02.p1k chrm 855 706 34923 34922 C 150 0.00 1243 reject_low 20 ALIGNMENT 0 YS2-7g02.p1k chrm 489 490 34202 35141 C 0 0.00 1243 reject_low 18 ALIGNMENT 39 YS2-7g02.p1k chrm 702 643 66819 66878 C 60 88.33 1243 reject_low 8 ALIGNMENT 0 YS2-7g02.q1k chrm 457 665 77225 77208 F 209 0.00 1226 reject_bad_break 0 ALIGNMENT 0 YS2-7g02.p1k chrm 706 855 2804 2803 F 150 0.00 1243 reject_low 13 ALIGNMENT 26 YS2-7g02.p1k chrm 456 399 44197 44249 C 58 87.93 1243|29,0 reject_low 18,19,20,22 ALIGNMENT 0 YS2-7g02.p1k chrm 855 706 43968 43967 C 150 0.00 1243 reject_low 22 ALIGNMENT 0 YS2-7g02.p1k chrm 448 449 35142 44204 C 0 0.00 1243 reject_low 19,20 ALIGNMENT 0 YS2-7g02.p1k chrm 696 855 71256 71255 F 160 0.00 1243 reject_low 10 ALIGNMENT 0 YS2-7g02.q1k chrm 887 619 68647 68646 C 269 0.00 1226 reject_low 4 ALIGNMENT 0 YS2-7g02.p1k chrm 855 455 47959 47958 C 401 0.00 1243 reject_low 16 ALIGNMENT 0 YS2-7g02.p1k chrm 855 703 66820 66819 C 153 0.00 1243 reject_low 8 ALIGNMENT 0 YS2-7g02.q1k chrm 62 494 77053 77052 F 433 0.00 1226 reject_low 3 ALIGNMENT 42 YS2-7g02.p1k chrm 705 633 34922 34995 C 73 87.67 1243 reject_low 20 ALIGNMENT 0 YS2-7g02.p1k chrm 62 406 2552 2551 F 345 0.00 1243 reject_low 13 ALIGNMENT 341 YS2-7g02.q1k chrm 33 456 76802 77224 F 424 99.06 1226 reject_bad_break 0 ALIGNMENT 24 YS2-7g02.p1k chrm 497 465 53717 53749 C 33 93.94 1243 reject_low 15 ALIGNMENT 46 YS2-7g02.p1k chrm 704 649 29830 29886 C 56 94.64 1243 reject_low 14 ALIGNMENT 0 YS2-7g02.p1k chrm 855 694 53829 53828 C 162 0.00 1243 reject_low 9 ALIGNMENT 28 YS2-7g02.q1k chrm 649 619 68605 68635 C 31 100.00 1226 reject_low 2 ALIGNMENT 0 YS2-7g02.p1k chrm 640 62 53883 53882 C 579 0.00 1243 reject_low 9 ALIGNMENT 0 YS2-7g02.q1k chrm 527 62 68674 68673 C 466 0.00 1226 reject_low 2 ALIGNMENT 0 YS2-7g02.p1k chrm 62 449 2537 2536 F 388 0.00 1243 reject_low 6 ALIGNMENT 20 YS2-7g02.p1k chrm 420 399 53736 53757 C 22 100.00 1243|10,29 reject_low 15,16,21,22 ALIGNMENT 0 YS2-7g02.p1k chrm 855 552 34139 34138 C 304 0.00 1243 reject_low 18 ALIGNMENT 0 YS2-7g02.p1k chrm 638 62 84544 84543 C 577 0.00 1243 reject_low 1,3 ALIGNMENT 24 YS2-7g02.p1k chrm 497 459 53666 53704 C 39 87.18 1243 reject_low 21 ALIGNMENT 20 YS2-7g02.p1k chrm 432 457 84213 84237 F 26 96.15 1243 reject_low 17 ALIGNMENT 935 YS2-7g03.q1k chr08 30 1084 259563 260633 F 1055 97.54 1270 accept 0 ALIGNMENT 993 YS2-7g03.p1k chr08 1159 30 264211 265345 C 1130 96.55 1354 accept 0 ALIGNMENT 0 YS2-7g04.q1k vc_1 336 62 2513 2512 C 275 0.00 377 reject_low 2 ALIGNMENT 41 YS2-7g04.q1k vc_4 337 377 5831 5871 F 41 100.00 377 reject_low 4 ALIGNMENT 0 YS2-7g04.q1k chr04 377 337 1422786 1422785 C 41 0.00 377 accept_chi 0 ALIGNMENT 0 YS2-7g04.q1k vc_3 336 62 2513 2512 C 275 0.00 377 reject_low 3 ALIGNMENT 0 YS2-7g04.p1k chr04 331 349 1423083 1423082 F 19 0.00 349 accept_chi 1 ALIGNMENT 41 YS2-7g04.q1k vc_1 377 337 2472 2512 C 41 100.00 377 reject_low 2 ALIGNMENT 38 YS2-7g04.q1k vc_7 340 377 13525 13562 F 38 100.00 377 reject_low 6 ALIGNMENT 0 YS2-7g04.q1k vc_4 62 336 5831 5830 F 275 0.00 377 reject_low 4 ALIGNMENT 270 YS2-7g04.p1k chr04 30 330 1422785 1423083 F 301 99.00 349 accept_chi 1 ALIGNMENT 36 YS2-7g04.q1k vc_5 374 339 1 36 C 36 100.00 377 reject_low 7 ALIGNMENT 0 YS2-7g04.q1k vc_5 338 62 37 36 C 277 0.00 377 reject_low 7 ALIGNMENT 41 YS2-7g04.q1k vc_3 377 337 2472 2512 C 41 100.00 377 reject_low 3 ALIGNMENT 0 YS2-7g04.q1k vc_5 338 62 5064 5063 C 277 0.00 377 reject_low 5 ALIGNMENT 39 YS2-7g04.q1k vc_5 377 339 5025 5063 C 39 100.00 377 reject_low 5 ALIGNMENT 278 YS2-7g04.q1k chr04 336 38 1422785 1423083 C 299 99.67 377 accept_chi 0 ALIGNMENT 0 YS2-7g04.q1k vc_7 62 339 13525 13524 F 278 0.00 377 reject_low 6 ALIGNMENT 975 YS2-7g05.p1k chr16 29 1156 269504 270644 F 1128 96.28 1346 accept 0 ALIGNMENT 966 YS2-7g05.q1k chr16 1234 42 272846 274034 C 1193 94.30 1421 accept 0 ALIGNMENT 919 YS2-7g07.q1k chr13 30 1066 864202 865256 F 1037 97.78 1296 accept 0 ALIGNMENT 928 YS2-7g07.p1k chr13 1170 33 865513 866669 C 1138 94.99 1332 accept 0 ALIGNMENT 309 YS2-7g09.p1k chr02 1203 785 490047 490483 C 419 92.36 1330 reject_low 1 ALIGNMENT 0 YS2-7g09.p1k chr02 784 92 490484 490483 C 693 0.00 1330 reject_low 1 ALIGNMENT 454 YS2-7g09.q1k chr02 32 512 490004 490483 F 481 98.34 1360 reject_low 1 ALIGNMENT 0 YS2-7g09.q1k chr09 510 62 46400 46399 C 449 0.00 1360 accept 0 ALIGNMENT 0 YS2-7g09.q1k chr02 513 620 490483 490482 F 108 0.00 1360 reject_low 1 ALIGNMENT 356 YS2-7g09.q1k chr09 1136 511 45781 46399 C 626 88.02 1360 accept 0 ALIGNMENT 657 YS2-7g09.p1k chr09 34 786 45644 46399 F 753 97.48 1330 accept 0 ALIGNMENT 0 YS2-7g09.p1k chr09 787 885 46399 46398 F 99 0.00 1330 accept 0 ALIGNMENT 0 YS2-7g11.q1k chr16 382 62 622629 622628 C 321 0.00 1351 reject_low 3 ALIGNMENT 0 YS2-7g11.q1k chr05 62 143 312310 312309 F 82 0.00 1351 reject_low 20 ALIGNMENT 0 YS2-7g11.q1k chr14 475 868 374961 374960 F 394 0.00 1351 reject_low 10 ALIGNMENT 0 YS2-7g11.q1k chr02 266 868 265477 265476 F 603 0.00 1351 reject_low 17 ALIGNMENT 0 YS2-7g11.q1k chr13 868 266 378300 378299 C 603 0.00 1351 reject_low 15 ALIGNMENT 83 YS2-7g11.q1k chr04 483 382 1095356 1095457 C 102 94.12 1351 reject_low 7 ALIGNMENT 0 YS2-7g11.q1k chr11 62 135 163028 163027 F 74 0.00 1351 reject_low 19 ALIGNMENT 0 YS2-7g11.q1k chr13 484 868 352379 352378 F 385 0.00 1351 reject_low 5 ALIGNMENT 0 YS2-7g11.q1k chr11 260 868 163153 163152 F 609 0.00 1351 reject_low 19 ALIGNMENT 43 YS2-7g11.q1k chr13 265 138 378299 378427 C 128 81.25 1351 reject_low 15 ALIGNMENT 0 YS2-7g11.q1k chr14 62 379 374868 374867 F 318 0.00 1351 reject_low 10 ALIGNMENT 0 YS2-7g11.q1k chr05 253 868 312418 312417 F 616 0.00 1351 reject_low 20 ALIGNMENT 0 YS2-7g11.q1k chr07 373 62 440821 440820 C 312 0.00 1351 reject_low 4 ALIGNMENT 0 YS2-7g11.q1k chr02 476 868 36486 36485 F 393 0.00 1351 reject_low 8 ALIGNMENT 37 YS2-7g11.q1k chr12 258 138 592730 592849 C 121 80.99 1351 reject_low 18 ALIGNMENT 0 YS2-7g11.q1k chr11 99 62 313430 313429 C 38 0.00 1351 reject_low 9 ALIGNMENT 0 YS2-7g11.q1k chr07 137 62 823124 823123 C 76 0.00 1351 reject_low 14 ALIGNMENT 0 YS2-7g11.q1k chr07 868 477 440720 440719 C 392 0.00 1351 reject_low 4 ALIGNMENT 976 YS2-7g11.p1k chr08 30 1137 354042 355163 F 1108 96.93 1313 accept 0 ALIGNMENT 0 YS2-7g11.q1k chr16 868 476 560195 560194 C 393 0.00 1351 reject_low 6 ALIGNMENT 0 YS2-7g11.q1k chr02 62 137 265349 265348 F 76 0.00 1351 reject_low 17 ALIGNMENT 88 YS2-7g11.q1k chr13 380 483 352276 352379 F 104 96.15 1351 reject_low 5 ALIGNMENT 0 YS2-7g11.q1k chr04 868 260 434442 434441 C 609 0.00 1351 reject_low 13 ALIGNMENT 0 YS2-7g11.q1k chr07 868 266 822996 822995 C 603 0.00 1351 reject_low 14 ALIGNMENT 81 YS2-7g11.q1k chr14 380 474 374868 374961 F 95 95.79 1351 reject_low 10 ALIGNMENT 0 YS2-7g11.q1k chr06 373 62 158010 158009 C 312 0.00 1351 reject_low 2 ALIGNMENT 105 YS2-7g11.q1k chr08 479 371 237845 237953 C 109 99.08 1351 reject_low 1 ALIGNMENT 94 YS2-7g11.q1k chr07 476 374 440719 440820 C 103 98.06 1351 reject_low 4 ALIGNMENT 95 YS2-7g11.q1k chr16 483 383 622528 622628 C 101 98.02 1351 reject_low 3 ALIGNMENT 0 YS2-7g11.q1k chr04 133 62 434567 434566 C 72 0.00 1351 reject_low 13 ALIGNMENT 0 YS2-7g11.q1k chr06 868 476 157910 157909 C 393 0.00 1351 reject_low 2 ALIGNMENT 0 YS2-7g11.q1k chr12 137 62 592850 592849 C 76 0.00 1351 reject_low 18 ALIGNMENT 0 YS2-7g11.q1k chr16 868 484 622529 622528 C 385 0.00 1351 reject_low 3 ALIGNMENT 40 YS2-7g11.q1k chr02 138 265 265349 265477 F 128 80.47 1351 reject_low 17 ALIGNMENT 0 YS2-7g11.q1k chr04 381 62 1095458 1095457 C 320 0.00 1351 reject_low 7 ALIGNMENT 0 YS2-7g11.q1k chr08 370 62 237954 237953 C 309 0.00 1351 reject_low 1 ALIGNMENT 94 YS2-7g11.q1k chr16 475 382 560194 560287 C 94 100.00 1351 reject_low 6 ALIGNMENT 0 YS2-7g11.q1k chr13 137 62 378428 378427 C 76 0.00 1351 reject_low 15 ALIGNMENT 89 YS2-7g11.q1k chr02 379 475 36391 36486 F 97 97.94 1351 reject_low 8 ALIGNMENT 44 YS2-7g11.q1k chr04 259 134 434441 434566 C 126 81.75 1351 reject_low 13 ALIGNMENT 96 YS2-7g11.q1k chr06 475 374 157909 158009 C 102 99.02 1351 reject_low 2 ALIGNMENT 47 YS2-7g11.q1k chr11 259 100 313268 313429 C 160 80.00 1351 reject_low 9 ALIGNMENT 0 YS2-7g11.q1k chr16 274 868 56781 56780 F 595 0.00 1351 reject_low 12 ALIGNMENT 0 YS2-7g11.q1k chr08 868 480 237846 237845 C 389 0.00 1351 reject_low 1 ALIGNMENT 43 YS2-7g11.q1k chr16 138 273 56645 56781 F 136 80.15 1351 reject_low 12 ALIGNMENT 0 YS2-7g11.q1k chr11 868 260 313269 313268 C 609 0.00 1351 reject_low 9 ALIGNMENT 0 YS2-7g11.q1k chr13 62 379 352276 352275 F 318 0.00 1351 reject_low 5 ALIGNMENT 30 YS2-7g11.q1k chr05 144 252 312310 312418 F 109 77.98 1351 reject_low 20 ALIGNMENT 0 YS2-7g11.q1k chr07 62 135 402148 402147 F 74 0.00 1351 reject_low 16 ALIGNMENT 0 YS2-7g11.q1k chr16 62 137 56645 56644 F 76 0.00 1351 reject_low 12 ALIGNMENT 0 YS2-7g11.q1k chr07 276 868 402288 402287 F 593 0.00 1351 reject_low 16 ALIGNMENT 47 YS2-7g11.q1k chr13 142 284 837625 837767 F 143 82.52 1351 reject_low 11 ALIGNMENT 37 YS2-7g11.q1k chr07 136 275 402148 402288 F 140 78.57 1351 reject_low 16 ALIGNMENT 0 YS2-7g11.q1k chr13 285 868 837767 837766 F 584 0.00 1351 reject_low 11 ALIGNMENT 0 YS2-7g11.q1k chr12 868 259 592731 592730 C 610 0.00 1351 reject_low 18 ALIGNMENT 0 YS2-7g11.q1k chr02 62 378 36391 36390 F 317 0.00 1351 reject_low 8 ALIGNMENT 0 YS2-7g11.q1k chr16 381 62 560288 560287 C 320 0.00 1351 reject_low 6 ALIGNMENT 962 YS2-7g11.q1k chr08 1135 40 357806 358915 C 1096 97.26 1351 accept 0 ALIGNMENT 0 YS2-7g11.q1k chr13 62 141 837625 837624 F 80 0.00 1351 reject_low 11 ALIGNMENT 0 YS2-7g11.q1k chr04 868 484 1095357 1095356 C 385 0.00 1351 reject_low 7 ALIGNMENT 43 YS2-7g11.q1k chr07 265 138 822995 823123 C 128 81.25 1351 reject_low 14 ALIGNMENT 34 YS2-7g11.q1k chr11 136 259 163028 163153 F 124 79.03 1351 reject_low 19 ALIGNMENT 938 YS2-7g12.p1k chr14 26 1085 682611 683681 F 1060 97.45 1298 accept 0 ALIGNMENT 1014 YS2-7g12.q1k chr14 1174 30 685999 687157 C 1145 97.03 1367 accept 0 ALIGNMENT 981 YS2-7g13.p1k chr05 30 1264 548892 550131 F 1235 93.85 1342 accept 0 ALIGNMENT 1049 YS2-7g13.q1k chr05 1292 40 552411 553665 C 1253 95.13 1377 accept 0 ALIGNMENT 714 YS2-7g16.q1k scplasm1 1198 36 1754 2923 C 1163 88.31 1342 accept_chi 0 ALIGNMENT 677 YS2-7g16.p1k vc_6 376 1184 5263 6085 F 809 96.29 1371 reject_low 2 ALIGNMENT 0 YS2-7g16.p1k vc_6 62 375 5263 5262 F 314 0.00 1371 reject_low 2 ALIGNMENT 982 YS2-7g16.p1k scplasm1 27 1117 5222 6318 F 1091 98.08 1371 accept_chi 1 ALIGNMENT 0 YS2-7g17.q1k chrm 62 306 34935 34934 F 245 0.00 1333 reject_low 26 ALIGNMENT 0 YS2-7g17.q1k chrm 267 62 4613 4612 C 206 0.00 1333 reject_low 9 ALIGNMENT 0 YS2-7g17.q1k chrm 62 305 81403 81402 F 244 0.00 1333 reject_low 23 ALIGNMENT 0 YS2-7g17.q1k chrm 62 632 34129 34128 F 571 0.00 1333 reject_low 27 ALIGNMENT 0 YS2-7g17.q1k chrm 357 891 53875 53874 F 535 0.00 1333 reject_low 11 ALIGNMENT 29 YS2-7g17.p1k chrm 784 573 3039 3245 C 212 80.19 1425 reject_low 25 ALIGNMENT 69 YS2-7g17.p1k chrm 525 394 82327 82457 C 132 90.15 1425 reject_low 34 ALIGNMENT 0 YS2-7g17.p1k chrm 700 118 10808 11032 C 583 0.00 1425 reject_low 28 ALIGNMENT 0 YS2-7g17.q1k chrm 62 306 69444 69443 F 245 0.00 1333 reject_low 32,34 ALIGNMENT 42 YS2-7g17.q1k vc_7 1175 1061 2605 2727 C 115 80.00 1333 reject_low 2 ALIGNMENT 42 YS2-7g17.q1k chrm 451 307 2655 2793 C 145 84.14 1333 reject_low 10 ALIGNMENT 0 YS2-7g17.p1k chrm 605 107 11203 11202 C 499 0.00 1425 reject_low 7 ALIGNMENT 0 YS2-7g17.p1k chrm 717 365 76640 82456 C 353 0.00 1425 reject_low 32 ALIGNMENT 179 YS2-7g17.p1k chrm 107 612 3893 4400 F 506 85.18 1425 reject_low 1 ALIGNMENT 188 YS2-7g17.q1k chrm 965 457 3890 4400 C 509 85.85 1333|5,0 reject_low 9 ALIGNMENT 0 YS2-7g17.q1k chrm 62 288 34268 34267 F 227 0.00 1333 reject_low 5 ALIGNMENT 0 YS2-7g17.p1k chrm 526 938 54842 54841 F 413 0.00 1425 reject_low 29 ALIGNMENT 47 YS2-7g17.p1k chrm 763 704 81403 81462 C 60 93.33 1425 reject_low 34 ALIGNMENT 39 YS2-7g17.p1k chrm 762 719 69444 69487 C 44 100.00 1425 reject_low 24 ALIGNMENT 0 YS2-7g17.q1k chrm 352 704 80548 82456 F 353 0.00 1333 reject_low 30 ALIGNMENT 0 YS2-7g17.p1k chrm 938 788 50090 50089 C 151 0.00 1425 reject_low 6 ALIGNMENT 25 YS2-7g17.p1k chrm 111 60 69435 69487 C 52 84.62 1425 reject_low 14 ALIGNMENT 0 YS2-7g17.p1k chrm 802 938 4612 4611 F 137 0.00 1425 reject_low 1 ALIGNMENT 39 YS2-7g17.p1k chrm 115 363 12404 12651 F 249 83.53 1425 reject_low 13 ALIGNMENT 0 YS2-7g17.q1k chrm 757 891 2930 2929 F 135 0.00 1333 reject_low 7,25,28 ALIGNMENT 41 YS2-7g17.q1k chrm 308 356 53828 53875 F 49 97.96 1333 reject_low 11 ALIGNMENT 38 YS2-7g17.p1k chrm 362 108 30450 30717 C 255 82.35 1425 reject_low 16 ALIGNMENT 0 YS2-7g17.p1k chrm 394 364 32359 32359 C 31 0.00 1425 reject_low 31 ALIGNMENT 41 YS2-7g17.q1k chrm 921 1020 35763 35860 F 100 84.00 1333|4,0 reject_low 5,26,27,33 ALIGNMENT 36 YS2-7g17.q1k chrm 351 268 4534 4612 C 84 84.52 1333 reject_low 9 ALIGNMENT 0 YS2-7g17.q1k chrm 359 920 34339 35762 F 562 0.00 1333 reject_low 5 ALIGNMENT 51 YS2-7g17.q1k chrm 289 358 34268 34338 F 70 91.43 1333 reject_low 5 ALIGNMENT 41 YS2-7g17.q1k chrm 307 407 34935 35037 F 101 83.17 1333 reject_low 26 ALIGNMENT 0 YS2-7g17.q1k chrm 676 891 82457 82456 F 216 0.00 1333 reject_low 23 ALIGNMENT 0 YS2-7g17.p1k chrm 938 785 3040 3039 C 154 0.00 1425 reject_low 25 ALIGNMENT 26 YS2-7g17.p1k chrm 170 57 76530 76641 C 114 79.82 1425 reject_low 24 ALIGNMENT 37 YS2-7g17.p1k chrm 131 363 54474 54710 F 233 82.40 1425 reject_low 29 ALIGNMENT 126 YS2-7g17.p1k chrm 394 589 12653 12845 F 196 92.35 1425 reject_low 13 ALIGNMENT 0 YS2-7g17.p1k chrm 773 938 31093 31092 F 166 0.00 1425 reject_low 20 ALIGNMENT 0 YS2-7g17.q1k chrm 62 546 32232 32231 F 485 0.00 1333 reject_low 33 ALIGNMENT 0 YS2-7g17.p1k chrm 718 589 35850 44860 C 130 0.00 1425 reject_low 5 ALIGNMENT 30 YS2-7g17.p1k chrm 522 395 32232 32358 C 128 82.03 1425 reject_low 31 ALIGNMENT 0 YS2-7g17.p1k chrm 393 365 82458 82456 C 29 0.00 1425 reject_low 34 ALIGNMENT 49 YS2-7g17.q1k chrm 351 295 75618 75673 C 57 96.49 1333 reject_low 17 ALIGNMENT 0 YS2-7g17.q1k chrm 62 284 3039 3038 F 223 0.00 1333 reject_low 12 ALIGNMENT 0 YS2-7g17.q1k chrm 408 920 35038 35762 F 513 0.00 1333 reject_low 26 ALIGNMENT 0 YS2-7g17.p1k chrm 938 363 30451 30450 C 576 0.00 1425 reject_low 16 ALIGNMENT 48 YS2-7g17.q1k chrm 706 928 32360 32580 F 223 84.30 1333|0,4 reject_low 33 ALIGNMENT 0 YS2-7g17.q1k chrm 497 891 3245 3244 F 395 0.00 1333 reject_low 12 ALIGNMENT 0 YS2-7g17.q1k chrm 62 298 73002 73001 F 237 0.00 1333 reject_low 22 ALIGNMENT 0 YS2-7g17.q1k vc_7 1060 62 2728 2727 C 999 0.00 1333 reject_low 2 ALIGNMENT 0 YS2-7g17.q1k chrm 456 352 4401 4533 C 105 0.00 1333 reject_low 9 ALIGNMENT 0 YS2-7g17.q1k chrm 710 891 73237 73236 F 182 0.00 1333 reject_low 32,34 ALIGNMENT 0 YS2-7g17.p1k chrm 572 118 3246 11032 C 455 0.00 1425 reject_low 25 ALIGNMENT 24 YS2-7g17.q1k chrm 850 1020 34818 34989 F 171 79.53 1333 reject_low 15 ALIGNMENT 44 YS2-7g17.q1k chrm 705 960 82457 82716 F 256 82.42 1333 reject_low 30 ALIGNMENT 0 YS2-7g17.p1k chrm 712 107 53876 53875 C 606 0.00 1425 reject_low 21 ALIGNMENT 0 YS2-7g17.p1k chrm 135 107 32583 32582 C 29 0.00 1425 reject_low 31 ALIGNMENT 37 YS2-7g17.q1k chrm 307 348 62862 62903 F 42 100.00 1333 reject_low 24 ALIGNMENT 0 YS2-7g17.q1k chrm 675 705 32359 32359 F 31 0.00 1333 reject_low 33 ALIGNMENT 0 YS2-7g17.p1k chrm 938 764 81404 81403 C 175 0.00 1425 reject_low 34 ALIGNMENT 30 YS2-7g17.q1k chrm 547 674 32232 32358 F 128 82.03 1333 reject_low 33 ALIGNMENT 0 YS2-7g17.q1k chrm 351 891 35849 35848 F 541 0.00 1333 reject_low 8 ALIGNMENT 193 YS2-7g17.q1k chrm 481 961 44861 45333 F 481 86.69 1333 reject_low 6 ALIGNMENT 47 YS2-7g17.q1k chrm 306 365 81403 81462 F 60 93.33 1333 reject_low 23 ALIGNMENT 0 YS2-7g17.q1k chrm 891 452 2656 2655 C 440 0.00 1333 reject_low 10 ALIGNMENT 0 YS2-7g17.p1k chrm 938 763 69445 69444 C 176 0.00 1425 reject_low 24 ALIGNMENT 0 YS2-7g17.q1k chrm 62 300 35799 35798 F 239 0.00 1333 reject_low 6,8 ALIGNMENT 0 YS2-7g17.p1k chrm 938 125 50092 50091 C 814 0.00 1425 reject_low 8 ALIGNMENT 46 YS2-7g17.p1k chrm 787 718 50089 50155 C 70 91.43 1425 reject_low 6 ALIGNMENT 0 YS2-7g17.p1k chrm 717 107 50156 50155 C 611 0.00 1425 reject_low 6 ALIGNMENT 40 YS2-7g17.q1k chrm 307 351 80503 80547 F 45 100.00 1333 reject_low 30 ALIGNMENT 0 YS2-7g17.q1k chrm 366 543 81463 82326 F 178 0.00 1333 reject_low 23 ALIGNMENT 45 YS2-7g17.q1k chrm 1010 955 2749 2804 C 56 91.07 1333|0,6 reject_low 9 ALIGNMENT 22 YS2-7g17.p1k chrm 384 313 2862 2930 C 72 83.33 1425 reject_low 19 ALIGNMENT 0 YS2-7g17.p1k chrm 364 393 12652 12652 F 30 0.00 1425 reject_low 13 ALIGNMENT 0 YS2-7g17.p1k chrm 707 107 66882 66881 C 601 0.00 1425 reject_low 11 ALIGNMENT 0 YS2-7g17.p1k chrm 938 365 82458 82457 C 574 0.00 1425 reject_low 23 ALIGNMENT 0 YS2-7g17.p1k chrm 107 130 54474 54473 F 24 0.00 1425 reject_low 29 ALIGNMENT 40 YS2-7g17.p1k chrm 719 772 31038 31093 F 54 92.59 1425 reject_low 20 ALIGNMENT 0 YS2-7g17.q1k chrm 351 647 69488 73176 F 297 0.00 1333 reject_low 32,34 ALIGNMENT 0 YS2-7g17.q1k chrm 62 849 34818 34817 F 788 0.00 1333 reject_low 15 ALIGNMENT 0 YS2-7g17.p1k chrm 938 838 76515 76514 C 101 0.00 1425 reject_low 32 ALIGNMENT 0 YS2-7g17.q1k chrm 306 62 2794 2793 C 245 0.00 1333 reject_low 10 ALIGNMENT 48 YS2-7g17.p1k chrm 767 708 66822 66881 C 60 95.00 1425 reject_low 11 ALIGNMENT 45 YS2-7g17.q1k chrm 954 706 12404 12651 C 249 83.94 1333 reject_low 1 ALIGNMENT 126 YS2-7g17.q1k chrm 675 480 12653 12845 C 196 92.35 1333 reject_low 1 ALIGNMENT 0 YS2-7g17.q1k chrm 708 920 34201 35762 F 213 0.00 1333 reject_low 27 ALIGNMENT 33 YS2-7g17.p1k chrm 124 53 50091 50161 C 72 84.72 1425 reject_low 8 ALIGNMENT 0 YS2-7g17.q1k chrm 351 480 35850 44860 F 130 0.00 1333 reject_low 6 ALIGNMENT 0 YS2-7g17.q1k chrm 925 924 32577 35766 F 0 0.00 1333 reject_low 33 ALIGNMENT 0 YS2-7g17.p1k chrm 938 112 69436 69435 C 827 0.00 1425 reject_low 14 ALIGNMENT 0 YS2-7g17.q1k chrm 294 62 75674 75673 C 233 0.00 1333 reject_low 17 ALIGNMENT 0 YS2-7g17.p1k chrm 938 762 53829 53828 C 177 0.00 1425 reject_low 21 ALIGNMENT 0 YS2-7g17.p1k chrm 703 526 81463 82326 C 178 0.00 1425 reject_low 34 ALIGNMENT 34 YS2-7g17.q1k chrm 666 756 2843 2930 F 91 84.62 1333 reject_low 7,25,28 ALIGNMENT 0 YS2-7g17.q1k chrm 62 306 80503 80502 F 245 0.00 1333 reject_low 30 ALIGNMENT 193 YS2-7g17.p1k chrm 588 104 44861 45337 C 485 86.60 1425 reject_low 5 ALIGNMENT 0 YS2-7g17.q1k vc_7 62 1023 63 62 F 962 0.00 1333 reject_low 3 ALIGNMENT 69 YS2-7g17.q1k chrm 544 675 82327 82457 F 132 90.15 1333 reject_low 23 ALIGNMENT 0 YS2-7g17.p1k chrm 938 769 35800 35799 C 170 0.00 1425 reject_low 5 ALIGNMENT 37 YS2-7g17.p1k chrm 395 525 54712 54842 F 131 83.97 1425 reject_low 29 ALIGNMENT 25 YS2-7g17.p1k chrm 117 62 11033 11088 C 56 83.93 1425 reject_low 25,28 ALIGNMENT 694 YS2-7g17.p1k chrm 102 1046 56411 57350 F 945 96.83 1425 accept 0 ALIGNMENT 41 YS2-7g17.p1k chrm 762 701 10746 10807 C 62 90.32 1425 reject_low 28 ALIGNMENT 0 YS2-7g17.q1k chrm 349 960 62904 69438 F 612 0.00 1333 reject_low 24 ALIGNMENT 0 YS2-7g17.p1k chrm 312 107 2931 2930 C 206 0.00 1425 reject_low 19 ALIGNMENT 0 YS2-7g17.p1k chrm 775 938 75673 75672 F 164 0.00 1425 reject_low 18 ALIGNMENT 0 YS2-7g17.q1k chrm 960 961 2799 3894 C 0 0.00 1333 reject_low 9 ALIGNMENT 0 YS2-7g17.p1k chrm 938 763 10747 10746 C 176 0.00 1425 reject_low 28 ALIGNMENT 41 YS2-7g17.p1k chrm 761 713 53828 53875 C 49 97.96 1425 reject_low 21 ALIGNMENT 0 YS2-7g17.q1k chrm 891 352 75619 75618 C 540 0.00 1333 reject_low 17 ALIGNMENT 43 YS2-7g17.p1k chrm 363 136 32360 32582 C 228 84.21 1425 reject_low 31 ALIGNMENT 0 YS2-7g17.p1k chrm 107 717 75618 75617 F 611 0.00 1425 reject_low 18 ALIGNMENT 43 YS2-7g17.p1k chrm 364 109 82457 82716 C 256 83.20 1425 reject_low 23,32,34 ALIGNMENT 0 YS2-7g17.p1k chrm 107 718 31038 31037 F 612 0.00 1425 reject_low 20 ALIGNMENT 49 YS2-7g17.p1k chrm 718 774 75618 75673 F 57 96.49 1425 reject_low 18 ALIGNMENT 35 YS2-7g17.q1k chrm 299 349 73002 73052 F 51 92.16 1333 reject_low 22 ALIGNMENT 0 YS2-7g17.p1k chrm 938 385 2863 2862 C 554 0.00 1425 reject_low 19 ALIGNMENT 29 YS2-7g17.q1k chrm 285 496 3039 3245 F 212 80.19 1333 reject_low 12 ALIGNMENT 0 YS2-7g17.q1k chrm 62 306 62862 62861 F 245 0.00 1333 reject_low 24 ALIGNMENT 0 YS2-7g17.p1k chrm 938 763 11048 11047 C 176 0.00 1425 reject_low 7 ALIGNMENT 46 YS2-7g17.p1k chrm 837 718 76514 76639 C 120 83.33 1425 reject_low 32 ALIGNMENT 0 YS2-7g17.p1k chrm 938 523 32233 32232 C 416 0.00 1425 reject_low 31 ALIGNMENT 50 YS2-7g17.q1k chrm 648 709 73177 73237 F 62 95.16 1333 reject_low 32,34 ALIGNMENT 0 YS2-7g17.p1k chrm 590 938 12845 12844 F 349 0.00 1425 reject_low 13 ALIGNMENT 0 YS2-7g17.q1k chrm 705 676 12652 12652 C 30 0.00 1333 reject_low 1 ALIGNMENT 36 YS2-7g17.p1k chrm 718 801 4534 4612 F 84 84.52 1425 reject_low 1 ALIGNMENT 0 YS2-7g17.p1k chrm 718 171 69488 76529 C 548 0.00 1425 reject_low 24 ALIGNMENT 42 YS2-7g17.p1k chrm 768 719 35799 35849 C 50 96.00 1425 reject_low 5 ALIGNMENT 38 YS2-7g17.q1k vc_7 1024 1061 63 100 F 38 100.00 1333 reject_low 3 ALIGNMENT 0 YS2-7g17.q1k chrm 479 62 12846 12845 C 418 0.00 1333 reject_low 1 ALIGNMENT 42 YS2-7g17.q1k chrm 633 707 34129 34200 F 75 89.33 1333 reject_low 27 ALIGNMENT 0 YS2-7g17.q1k chrm 62 665 2843 2842 F 604 0.00 1333 reject_low 7,25,28 ALIGNMENT 704 YS2-7g17.q1k chrm 962 29 56416 57357 C 934 97.00 1333 accept 0 ALIGNMENT 0 YS2-7g17.p1k chrm 613 717 4401 4533 F 105 0.00 1425 reject_low 1 ALIGNMENT 39 YS2-7g17.q1k chrm 307 350 69444 69487 F 44 100.00 1333 reject_low 32,34 ALIGNMENT 42 YS2-7g17.q1k chrm 301 350 35799 35849 F 50 96.00 1333 reject_low 6,8 ALIGNMENT 0 YS2-7g17.p1k chrm 364 394 54711 54711 F 31 0.00 1425 reject_low 29 ALIGNMENT 32 YS2-7g17.p1k chrm 762 606 11047 11202 C 157 80.89 1425 reject_low 7 ALIGNMENT 0 YS2-7g17.q1k chrm 350 891 73052 73051 F 542 0.00 1333 reject_low 22 ALIGNMENT 0 YS2-7g17.p1k chrm 938 768 66823 66822 C 171 0.00 1425 reject_low 11 ALIGNMENT 0 YS2-7g17.q1k vc_7 62 1023 13525 13524 F 962 0.00 1333 reject_low 4 ALIGNMENT 38 YS2-7g17.q1k vc_7 1024 1061 13525 13562 F 38 100.00 1333 reject_low 4 ALIGNMENT 37 YS2-7g17.q1k chrm 961 1009 69439 69487 F 49 89.80 1333 reject_low 24 ALIGNMENT 0 YS2-7g17.q1k chrm 62 307 53828 53827 F 246 0.00 1333 reject_low 11 ALIGNMENT 0 YS2-7g18.q1k chr04 322 240 519322 519321 C 83 0.00 322 reject_low 13 ALIGNMENT 0 YS2-7g18.q1k chr05 62 208 62435 62434 F 147 0.00 322 reject_low 15 ALIGNMENT 39 YS2-7g18.q1k vc_5 322 284 5025 5063 C 39 100.00 322 reject_low 5 ALIGNMENT 25 YS2-7g18.q1k chr05 209 239 62435 62465 F 31 96.77 322 reject_low 15 ALIGNMENT 208 YS2-7g18.q1k chr07 39 281 738396 738637 F 243 97.53 322 accept_chi 0 ALIGNMENT 28 YS2-7g18.p1k chr09 66 103 197138 197175 F 38 94.74 292 reject_low 11 ALIGNMENT 25 YS2-7g18.p1k chr04 73 103 519321 519351 F 31 96.77 292 reject_low 12 ALIGNMENT 25 YS2-7g18.p1k chr15 73 103 704073 704103 F 31 96.77 292 reject_low 18 ALIGNMENT 0 YS2-7g18.q1k vc_5 283 62 5064 5063 C 222 0.00 322 reject_low 5 ALIGNMENT 0 YS2-7g18.q1k vc_1 281 62 2513 2512 C 220 0.00 322 reject_low 2 ALIGNMENT 0 YS2-7g18.q1k chr13 62 208 504637 504636 F 147 0.00 322 reject_low 8 ALIGNMENT 0 YS2-7g18.q1k chr15 208 62 704104 704103 C 147 0.00 322 reject_low 19 ALIGNMENT 0 YS2-7g18.q1k chr05 240 322 62465 62464 F 83 0.00 322 reject_low 15 ALIGNMENT 0 YS2-7g18.q1k chr09 322 247 197139 197138 C 76 0.00 322 reject_low 10 ALIGNMENT 41 YS2-7g18.q1k vc_3 322 282 2472 2512 C 41 100.00 322 reject_low 3 ALIGNMENT 25 YS2-7g18.q1k chr15 239 209 704073 704103 C 31 96.77 322 reject_low 19 ALIGNMENT 0 YS2-7g18.q1k chr15 322 240 704074 704073 C 83 0.00 322 reject_low 19 ALIGNMENT 0 YS2-7g18.q1k vc_4 62 281 5831 5830 F 220 0.00 322 reject_low 4 ALIGNMENT 0 YS2-7g18.q1k vc_7 62 284 13525 13524 F 223 0.00 322 reject_low 6 ALIGNMENT 0 YS2-7g18.p1k chr09 104 292 197175 197174 F 189 0.00 292 reject_low 11 ALIGNMENT 0 YS2-7g18.p1k chr15 104 292 704103 704102 F 189 0.00 292 reject_low 18 ALIGNMENT 38 YS2-7g18.q1k vc_7 285 322 13525 13562 F 38 100.00 322 reject_low 6 ALIGNMENT 28 YS2-7g18.q1k chr09 246 209 197138 197175 C 38 94.74 322 reject_low 10 ALIGNMENT 0 YS2-7g18.p1k chr13 292 104 504638 504637 C 189 0.00 292 reject_low 9 ALIGNMENT 25 YS2-7g18.q1k chr08 239 209 91772 91802 C 31 96.77 322 reject_low 17 ALIGNMENT 0 YS2-7g18.q1k chr08 208 62 91803 91802 C 147 0.00 322 reject_low 17 ALIGNMENT 0 YS2-7g18.q1k chr08 322 240 91773 91772 C 83 0.00 322 reject_low 17 ALIGNMENT 0 YS2-7g18.q1k chr07 282 322 738637 738636 F 41 0.00 322 accept_chi 0 ALIGNMENT 0 YS2-7g18.q1k chr04 208 62 519352 519351 C 147 0.00 322 reject_low 13 ALIGNMENT 41 YS2-7g18.q1k vc_1 322 282 2472 2512 C 41 100.00 322 reject_low 2 ALIGNMENT 25 YS2-7g18.p1k chr08 73 103 91772 91802 F 31 96.77 292 reject_low 16 ALIGNMENT 0 YS2-7g18.p1k chr07 292 274 738397 738396 C 19 0.00 292 accept_chi 1 ALIGNMENT 0 YS2-7g18.q1k vc_3 281 62 2513 2512 C 220 0.00 322 reject_low 3 ALIGNMENT 25 YS2-7g18.q1k chr04 239 209 519321 519351 C 31 96.77 322 reject_low 13 ALIGNMENT 0 YS2-7g18.q1k chr13 258 322 504686 504685 F 65 0.00 322 reject_low 8 ALIGNMENT 25 YS2-7g18.p1k chr05 103 73 62435 62465 C 31 96.77 292 reject_low 14 ALIGNMENT 0 YS2-7g18.p1k chr08 104 292 91802 91801 F 189 0.00 292 reject_low 16 ALIGNMENT 202 YS2-7g18.p1k chr07 273 32 738396 738637 C 242 97.11 292 accept_chi 1 ALIGNMENT 0 YS2-7g18.q1k chr09 208 62 197176 197175 C 147 0.00 322 reject_low 10 ALIGNMENT 28 YS2-7g18.p1k chr13 103 55 504637 504686 C 49 89.80 292 reject_low 9 ALIGNMENT 0 YS2-7g18.p1k chr05 292 104 62436 62435 C 189 0.00 292 reject_low 14 ALIGNMENT 0 YS2-7g18.p1k chr04 104 292 519351 519350 F 189 0.00 292 reject_low 12 ALIGNMENT 36 YS2-7g18.q1k vc_5 319 284 1 36 C 36 100.00 322 reject_low 7 ALIGNMENT 28 YS2-7g18.q1k chr13 209 257 504637 504686 F 49 89.80 322 reject_low 8 ALIGNMENT 0 YS2-7g18.q1k vc_5 283 62 37 36 C 222 0.00 322 reject_low 7 ALIGNMENT 41 YS2-7g18.q1k vc_4 282 322 5831 5871 F 41 100.00 322 reject_low 4 ALIGNMENT 1023 YS2-7g19.q1k chr11 34 1201 359690 360853 F 1168 97.26 1356 accept 0 ALIGNMENT 814 YS2-7g19.p1k chr11 1195 240 362867 363816 C 956 96.23 1429 accept 0 ALIGNMENT 1054 YS2-7g20.q1k chr08 38 1190 280335 281496 F 1153 98.18 1334 accept 0 ALIGNMENT 969 YS2-7g20.p1k chr08 1204 75 283386 284528 C 1130 96.81 1393 accept 0 ALIGNMENT 952 YS2-7g22.q1k chr07 33 1287 50382 51644 F 1255 93.78 1291 accept 0 ALIGNMENT 879 YS2-7g22.p1k chr07 1255 200 55053 56104 C 1056 94.98 1322 accept 0 ALIGNMENT 576 YS2-7g23.p1k chr04 725 34 1497580 1498294 C 692 95.23 744 accept_chi 1 ALIGNMENT 582 YS2-7g23.q1k chr04 32 722 1497580 1498294 F 691 95.66 723 accept_chi 0 ALIGNMENT 0 YS2-7g23.p1k chr04 744 726 1497581 1497580 C 19 0.00 744 accept_chi 1 ALIGNMENT 1013 YS2-7h02.p1k chr16 1213 29 385882 387073 C 1185 96.12 1359 accept 0 ALIGNMENT 42 YS2-7h02.q1k chr16 39 89 384587 384638 F 51 98.04 111 accept 0 ALIGNMENT 47 YS2-7h04.q1k chr14 41 88 442901 442948 F 48 100.00 115 accept 0 ALIGNMENT 186 YS2-7h05.q1k chr10 351 38 479087 479400 C 314 87.58 392 reject_low 6 ALIGNMENT 0 YS2-7h05.q1k chr01 352 392 165038 165037 F 41 0.00 392 reject_low 4 ALIGNMENT 0 YS2-7h05.q1k chr04 352 392 883093 883092 F 41 0.00 392 reject_low 14 ALIGNMENT 180 YS2-7h05.q1k chr02 351 38 260696 261009 C 314 86.94 392 reject_low 13 ALIGNMENT 186 YS2-7h05.q1k chr16 38 351 809123 809436 F 314 87.58 392 reject_low 7 ALIGNMENT 0 YS2-7h05.q1k chr05 352 392 448191 448190 F 41 0.00 392 reject_low 15 ALIGNMENT 0 YS2-7h05.q1k chr12 352 392 480773 480772 F 41 0.00 392 reject_low 17 ALIGNMENT 0 YS2-7h05.q1k chr14 352 392 101403 101402 F 41 0.00 392 ambiguous_trans 0 ALIGNMENT 0 YS2-7h05.q1k chr16 352 392 855424 855423 F 41 0.00 392 reject_low 24 ALIGNMENT 0 YS2-7h05.q1k chr04 352 392 650292 650291 F 41 0.00 392 reject_low 8 ALIGNMENT 0 YS2-7h05.q1k chr04 392 352 804020 804019 C 41 0.00 392 ambiguous_trans_ua 1 ALIGNMENT 290 YS2-7h05.q1k chr04 351 36 804019 804334 C 316 98.42 392 ambiguous_trans_ua 1 ALIGNMENT 0 YS2-7h05.q1k chr12 392 352 594270 594269 C 41 0.00 392 reject_low 18 ALIGNMENT 0 YS2-7h05.q1k chr13 392 352 197458 197457 C 41 0.00 392 reject_low 19 ALIGNMENT 0 YS2-7h05.q1k chr16 392 352 57578 57577 C 41 0.00 392 reject_low 22 ALIGNMENT 183 YS2-7h05.q1k chr07 38 351 566329 566642 F 314 87.26 392 reject_low 10 ALIGNMENT 0 YS2-7h05.q1k chr02 392 352 260697 260696 C 41 0.00 392 reject_low 13 ALIGNMENT 183 YS2-7h05.q1k chr05 38 351 496977 497290 F 314 87.26 392 reject_low 9 ALIGNMENT 0 YS2-7h05.q1k chr16 392 352 845535 845534 C 41 0.00 392 reject_low 23 ALIGNMENT 0 YS2-7h05.q1k chr04 352 392 991514 991513 F 41 0.00 392 reject_low 5 ALIGNMENT 0 YS2-7h05.q1k chr02 392 352 222163 222162 C 41 0.00 392 ambiguous_trans 2 ALIGNMENT 180 YS2-7h05.q1k chr12 351 38 594269 594582 C 314 86.94 392 reject_low 18 ALIGNMENT 180 YS2-7h05.q1k chr10 351 38 473503 473816 C 314 86.94 392 reject_low 16 ALIGNMENT 180 YS2-7h05.q1k chr16 351 38 845534 845847 C 314 86.94 392 reject_low 23 ALIGNMENT 0 YS2-7h05.q1k chr07 352 392 566642 566641 F 41 0.00 392 reject_low 10 ALIGNMENT 0 YS2-7h05.q1k chr16 352 392 809436 809435 F 41 0.00 392 reject_low 7 ALIGNMENT 183 YS2-7h05.q1k chr13 38 351 377182 377495 F 314 87.26 392 reject_low 12 ALIGNMENT 180 YS2-7h05.q1k chr05 38 351 447878 448191 F 314 86.94 392 reject_low 15 ALIGNMENT 183 YS2-7h05.q1k chr13 351 38 185290 185603 C 314 87.26 392 reject_low 11 ALIGNMENT 180 YS2-7h05.q1k chr13 351 38 197457 197770 C 314 86.94 392 reject_low 19 ALIGNMENT 0 YS2-7h05.q1k chr10 392 352 479088 479087 C 41 0.00 392 reject_low 6 ALIGNMENT 180 YS2-7h05.q1k chr12 38 351 480460 480773 F 314 86.94 392 reject_low 17 ALIGNMENT 287 YS2-7h05.q1k chr13 36 351 361482 361797 F 316 98.10 392 ambiguous_trans 3 ALIGNMENT 180 YS2-7h05.q1k chr15 351 38 595941 596254 C 314 86.94 392 reject_low 21 ALIGNMENT 0 YS2-7h05.q1k chr13 352 392 361797 361796 F 41 0.00 392 ambiguous_trans 3 ALIGNMENT 0 YS2-7h05.q1k chr15 392 352 595942 595941 C 41 0.00 392 reject_low 21 ALIGNMENT 0 YS2-7h05.q1k chr13 392 352 185291 185290 C 41 0.00 392 reject_low 11 ALIGNMENT 186 YS2-7h05.q1k chr01 38 351 164725 165038 F 314 87.58 392 reject_low 4 ALIGNMENT 180 YS2-7h05.q1k chr04 38 351 882780 883093 F 314 86.94 392 reject_low 14 ALIGNMENT 183 YS2-7h05.q1k chr04 38 351 649979 650292 F 314 87.26 392 reject_low 8 ALIGNMENT 0 YS2-7h05.q1k chr05 352 392 497290 497289 F 41 0.00 392 reject_low 9 ALIGNMENT 180 YS2-7h05.q1k chr14 351 38 520286 520599 C 314 86.94 392 reject_low 20 ALIGNMENT 180 YS2-7h05.q1k chr16 38 351 855111 855424 F 314 86.94 392 reject_low 24 ALIGNMENT 287 YS2-7h05.q1k chr02 351 36 222162 222477 C 316 98.10 392 ambiguous_trans 2 ALIGNMENT 186 YS2-7h05.q1k chr04 38 351 991201 991514 F 314 87.58 392 reject_low 5 ALIGNMENT 0 YS2-7h05.q1k chr13 352 392 377495 377494 F 41 0.00 392 reject_low 12 ALIGNMENT 180 YS2-7h05.q1k chr16 351 38 57577 57890 C 314 86.94 392 reject_low 22 ALIGNMENT 0 YS2-7h05.q1k chr10 392 352 473504 473503 C 41 0.00 392 reject_low 16 ALIGNMENT 305 YS2-7h05.q1k chr14 36 351 101088 101403 F 316 100.00 392 ambiguous_trans 0 ALIGNMENT 0 YS2-7h05.q1k chr14 392 352 520287 520286 C 41 0.00 392 reject_low 20 ALIGNMENT 960 YS2-7h06.p1k chr12 1086 31 462697 463762 C 1056 96.97 1336 accept 0 ALIGNMENT 32 YS2-7h06.q1k chr12 50 104 460295 460347 F 55 90.91 128 accept 0 ALIGNMENT 960 YS2-7h06.p1k chr12 1086 31 453560 454625 C 1056 96.97 1336 reject_low 1 ALIGNMENT 133 YS2-7h07.q1k chr14 1134 934 503626 503834 C 201 91.04 1387|0,3 accept 0 ALIGNMENT 869 YS2-7h07.q1k chr14 938 36 503941 504844 C 903 99.22 1387|2,0 accept 0 ALIGNMENT 0 YS2-7h07.p1k chr07 651 62 228335 228334 C 590 0.00 1416 reject_low 1 ALIGNMENT 300 YS2-7h07.p1k chr07 1126 652 227854 228334 C 475 87.79 1416 reject_low 1 ALIGNMENT 983 YS2-7h07.p1k chr14 34 1194 499061 500236 F 1161 95.61 1416 accept 0 ALIGNMENT 0 YS2-7h07.q1k chr14 936 937 503832 503942 C 0 0.00 1387 accept 0 ALIGNMENT 47 YS2-7h08.q1k chr04 40 94 617449 617504 F 55 98.18 117 accept 0 ALIGNMENT 858 YS2-7h08.p1k chr04 1031 33 621592 622605 C 999 96.60 1302 accept 0 ALIGNMENT 960 YS2-7h09.q1k chr11 1136 40 271720 272824 C 1097 96.99 1338 accept 0 ALIGNMENT 928 YS2-7h09.p1k chr11 38 1149 271131 272259 F 1112 96.22 1382 accept 0 ALIGNMENT 970 YS2-7h11.q1k chr05 36 1149 426632 427762 F 1114 96.32 1336 accept 0 ALIGNMENT 942 YS2-7h11.p1k chr05 1125 36 430065 431172 C 1090 97.16 1353 accept 0 ALIGNMENT 34 YS2-7h12.p1k chr07 710 649 404797 404858 C 62 93.55 1377 reject_low 2 ALIGNMENT 37 YS2-7h12.p1k chr01 710 649 189210 189271 C 62 95.16 1377 reject_low 1 ALIGNMENT 0 YS2-7h12.p1k chrm 921 360 80498 80497 C 562 0.00 1377 reject_low 5 ALIGNMENT 49 YS2-7h12.p1k chrm 357 297 10742 10802 C 61 93.44 1377 reject_low 7 ALIGNMENT 46 YS2-7h12.p1k chrm 356 288 64514 64583 C 69 91.30 1377 reject_low 6 ALIGNMENT 0 YS2-7h12.p1k chrm 921 356 9031 9030 C 566 0.00 1377 reject_low 9 ALIGNMENT 0 YS2-7h12.p1k chrm 921 357 64515 64514 C 565 0.00 1377 reject_low 6 ALIGNMENT 0 YS2-7h12.p1k chr01 648 624 189272 189266 C 25 0.00 1377 reject_low 1 ALIGNMENT 0 YS2-7h12.p1k chr01 921 711 189211 189210 C 211 0.00 1377 reject_low 1 ALIGNMENT 0 YS2-7h12.p1k chrm 356 780 9534 11533 F 425 0.00 1377 reject_low 11 ALIGNMENT 0 YS2-7h12.p1k chrm 921 358 10743 10742 C 564 0.00 1377 reject_low 7 ALIGNMENT 0 YS2-7h12.p1k chrm 62 311 67947 67946 F 250 0.00 1377 reject_low 10 ALIGNMENT 21 YS2-7h12.p1k chrm 781 808 11534 11561 F 28 96.43 1377 reject_low 11 ALIGNMENT 0 YS2-7h12.p1k chr07 921 711 404798 404797 C 211 0.00 1377 reject_low 2 ALIGNMENT 0 YS2-7h12.p1k chr01 541 62 189350 189349 C 480 0.00 1377 reject_low 1 ALIGNMENT 0 YS2-7h12.p1k chrm 921 368 11494 11493 C 554 0.00 1377 reject_low 3 ALIGNMENT 39 YS2-7h12.p1k chrm 355 306 11045 11094 C 50 94.00 1377 reject_low 8 ALIGNMENT 68 YS2-7h12.p1k chr01 623 542 189267 189349 C 82 98.78 1377 reject_low 1 ALIGNMENT 34 YS2-7h12.p1k chrm 355 312 9030 9073 C 44 95.45 1377 reject_low 9 ALIGNMENT 0 YS2-7h12.p1k chrm 305 62 11095 11094 C 244 0.00 1377 reject_low 8 ALIGNMENT 0 YS2-7h12.p1k chrm 280 62 11577 11576 C 219 0.00 1377 reject_low 3 ALIGNMENT 0 YS2-7h12.p1k chrm 287 62 64584 64583 C 226 0.00 1377 reject_low 6 ALIGNMENT 68 YS2-7h12.p1k chr07 623 542 404854 404936 C 82 98.78 1377 reject_low 2 ALIGNMENT 0 YS2-7h12.p1k chr07 541 62 404937 404936 C 480 0.00 1377 reject_low 2 ALIGNMENT 0 YS2-7h12.p1k chrm 357 921 67991 67990 F 565 0.00 1377 reject_low 10 ALIGNMENT 0 YS2-7h12.p1k chrm 311 62 9074 9073 C 250 0.00 1377 reject_low 9 ALIGNMENT 0 YS2-7h12.p1k chrm 291 62 80565 80564 C 230 0.00 1377 reject_low 5 ALIGNMENT 0 YS2-7h12.p1k chrm 296 62 10803 10802 C 235 0.00 1377 reject_low 7 ALIGNMENT 45 YS2-7h12.p1k chrm 285 355 12241 12312 F 71 88.73 1377 reject_low 4 ALIGNMENT 0 YS2-7h12.p1k chrm 356 921 12312 12311 F 566 0.00 1377 reject_low 4 ALIGNMENT 43 YS2-7h12.q1k chrm 35 89 40990 41045 F 55 98.18 112 accept 0 ALIGNMENT 44 YS2-7h12.p1k chrm 367 281 11493 11576 C 87 86.21 1377 reject_low 3 ALIGNMENT 39 YS2-7h12.p1k chrm 306 355 9484 9533 F 50 94.00 1377 reject_low 11 ALIGNMENT 33 YS2-7h12.p1k chrm 312 356 67947 67991 F 45 93.33 1377 reject_low 10 ALIGNMENT 47 YS2-7h12.p1k chrm 359 292 80497 80564 C 68 91.18 1377 reject_low 5 ALIGNMENT 0 YS2-7h12.p1k chrm 62 284 12241 12240 F 223 0.00 1377 reject_low 4 ALIGNMENT 0 YS2-7h12.p1k chrm 809 921 11561 11560 F 113 0.00 1377 reject_low 11 ALIGNMENT 861 YS2-7h12.p1k chrm 1165 35 42272 43415 C 1131 97.70 1377 accept 0 ALIGNMENT 0 YS2-7h12.p1k chrm 62 305 9484 9483 F 244 0.00 1377 reject_low 11 ALIGNMENT 0 YS2-7h12.p1k chrm 921 356 11046 11045 C 566 0.00 1377 reject_low 8 ALIGNMENT 0 YS2-7h12.p1k chr07 648 624 404859 404853 C 25 0.00 1377 reject_low 2 ALIGNMENT 892 YS2-7h13.p1k chr04 31 1021 1130957 1131961 F 991 97.88 1274 accept 0 ALIGNMENT 1047 YS2-7h13.q1k chr04 1271 30 1132955 1134200 C 1242 95.49 1378 accept 0 ALIGNMENT 812 YS2-7h14.p1k chr09 1057 37 403338 404350 C 1021 94.91 1286 accept 0 ALIGNMENT 53 YS2-7h14.q1k chr09 35 87 400989 401041 F 53 100.00 109 accept 0 ALIGNMENT 535 YS2-7h15.p1k chr02 604 31 608781 609355 C 574 98.95 622 accept_chi 1 ALIGNMENT 546 YS2-7h15.q1k chr02 39 614 608781 609356 F 576 99.48 615 accept_chi 0 ALIGNMENT 0 YS2-7h15.p1k chr02 622 605 608782 608781 C 18 0.00 622 accept_chi 1 ALIGNMENT 46 YS2-7h16.q1k chr16 30 80 97742 97792 F 51 98.04 104 reject_low 1 ALIGNMENT 49 YS2-7h16.q1k chr13 80 30 633175 633225 C 51 100.00 104 accept 0 ALIGNMENT 972 YS2-7h16.p1k chr13 56 1200 627758 628917 F 1145 95.02 1402 accept 0 ALIGNMENT 175 YS2-7h17.q1k chr12 30 217 664097 664284 F 188 98.40 257 accept_chi 1 ALIGNMENT 0 YS2-7h17.p1k chr12 237 220 664096 664095 C 18 0.00 237 accept_chi 0 ALIGNMENT 41 YS2-7h17.q1k vc_4 217 257 5831 5871 F 41 100.00 257 reject_low 4 ALIGNMENT 0 YS2-7h17.q1k vc_4 62 216 5831 5830 F 155 0.00 257 reject_low 4 ALIGNMENT 36 YS2-7h17.q1k vc_5 254 219 1 36 C 36 100.00 257 reject_low 7 ALIGNMENT 41 YS2-7h17.q1k vc_1 257 217 2472 2512 C 41 100.00 257 reject_low 2 ALIGNMENT 38 YS2-7h17.q1k vc_7 220 257 13525 13562 F 38 100.00 257 reject_low 6 ALIGNMENT 177 YS2-7h17.p1k chr12 219 30 664095 664284 C 190 98.42 237 accept_chi 0 ALIGNMENT 0 YS2-7h17.q1k vc_5 218 62 37 36 C 157 0.00 257 reject_low 7 ALIGNMENT 0 YS2-7h17.q1k vc_1 216 62 2513 2512 C 155 0.00 257 reject_low 2 ALIGNMENT 39 YS2-7h17.q1k vc_5 257 219 5025 5063 C 39 100.00 257 reject_low 5 ALIGNMENT 0 YS2-7h17.q1k chr12 218 257 664284 664283 F 40 0.00 257 accept_chi 1 ALIGNMENT 0 YS2-7h17.q1k vc_5 218 62 5064 5063 C 157 0.00 257 reject_low 5 ALIGNMENT 0 YS2-7h17.q1k vc_7 62 219 13525 13524 F 158 0.00 257 reject_low 6 ALIGNMENT 41 YS2-7h17.q1k vc_3 257 217 2472 2512 C 41 100.00 257 reject_low 3 ALIGNMENT 0 YS2-7h17.q1k vc_3 216 62 2513 2512 C 155 0.00 257 reject_low 3 ALIGNMENT 970 YS2-7h18.p1k chr03 1162 32 186808 187954 C 1131 96.64 1349 accept 0 ALIGNMENT 1032 YS2-7h19.q1k chr13 1237 30 862527 863754 C 1208 96.19 1337 accept 0 ALIGNMENT 989 YS2-7h19.p1k chr13 56 1214 860205 861384 F 1159 96.12 1368 accept 0 ALIGNMENT 44 YS2-7h20.q1k chr02 41 92 106141 106191 F 52 98.08 116 accept 0 ALIGNMENT 916 YS2-7h20.p1k chr02 1112 50 111065 112137 C 1063 96.43 1304 accept 0 ALIGNMENT 845 YS2-7h21.p1k chr10 1168 198 302253 303237 C 971 96.70 1327 accept 0 ALIGNMENT 995 YS2-7h21.q1k chr10 34 1223 298611 299803 F 1190 96.47 1298 accept 0 ALIGNMENT 922 YS2-7h22.p1k chr12 1153 31 464070 465193 C 1123 94.92 1204 accept 1 ALIGNMENT 44 YS2-7h22.q1k chr12 30 77 460589 460637 F 48 97.92 103 accept 1 ALIGNMENT 922 YS2-7h22.p1k chr12 1153 31 454933 456056 C 1123 94.92 1204 accept 0 ALIGNMENT 44 YS2-7h22.q1k chr12 30 77 451452 451500 F 48 97.92 103 accept 0 ALIGNMENT 0 YS2-7h23.q1k chr13 133 62 44405 44404 C 72 0.00 1223 reject_low 4 ALIGNMENT 47 YS2-7h23.q1k chr09 582 530 26060 26112 C 53 96.23 1223 reject_low 2 ALIGNMENT 0 YS2-7h23.q1k chr06 848 164 160560 160559 C 685 0.00 1223 reject_low 3 ALIGNMENT 918 YS2-7h23.p1k chr01 1174 36 222827 223982 C 1139 93.85 1228 accept_tel 0 ALIGNMENT 0 YS2-7h23.q1k chr09 529 62 26113 26112 C 468 0.00 1223 reject_low 2 ALIGNMENT 1023 YS2-7h23.q1k chr08 39 1223 541150 542353 F 1185 96.12 1223 reject_low 1 ALIGNMENT 1010 YS2-7h23.q1k chr01 39 1211 220539 221728 F 1173 95.99 1223 accept_tel 0 ALIGNMENT 0 YS2-7h23.q1k chr13 848 164 44376 44375 C 685 0.00 1223 reject_low 4 ALIGNMENT 21 YS2-7h23.q1k chr06 163 134 160559 160588 C 30 93.33 1223 reject_low 3 ALIGNMENT 21 YS2-7h23.q1k chr13 163 134 44375 44404 C 30 93.33 1223 reject_low 4 ALIGNMENT 0 YS2-7h23.q1k chr06 133 62 160589 160588 C 72 0.00 1223 reject_low 3 ALIGNMENT 858 YS2-7h23.p1k chr08 1015 36 549638 550628 C 980 95.82 1228 reject_low 1 ALIGNMENT 0 YS2-7h23.q1k chr09 848 583 26061 26060 C 266 0.00 1223 reject_low 2 ALIGNMENT 172 YS2-7h24.p1k chr06 35 225 258111 258300 F 191 97.91 537 reject_low 1 ALIGNMENT 0 YS2-7h24.p1k chr04 92 223 216348 216347 F 132 0.00 537 accept 0 ALIGNMENT 0 YS2-7h24.p1k chr06 226 537 258300 258299 F 312 0.00 537 reject_low 1 ALIGNMENT 0 YS2-7h24.p1k chr04 522 537 216647 216646 F 16 0.00 537 accept 0 ALIGNMENT 278 YS2-7h24.p1k chr04 224 521 216348 216647 F 298 98.66 537 accept 0 ALIGNMENT 1037 YS2-7i01.p1k chr12 35 1200 453000 454173 F 1166 97.00 1263 accept 0 ALIGNMENT 997 YS2-7i01.q1k chr12 1177 29 465727 466899 C 1149 96.43 1249 accept 1 ALIGNMENT 997 YS2-7i01.q1k chr12 1177 29 456590 457762 C 1149 96.43 1249 accept 0 ALIGNMENT 1037 YS2-7i01.p1k chr12 35 1200 462137 463310 F 1166 97.00 1263 accept 1 ALIGNMENT 964 YS2-7i02.p1k chr04 32 1144 728785 729911 F 1113 96.68 1311 accept 0 ALIGNMENT 1057 YS2-7i02.q1k chr04 1233 43 733910 735108 C 1191 97.23 1294 accept 0 ALIGNMENT 556 YS2-7i05.q1k chr14 38 875 131403 132244 F 838 89.14 1302 accept 0 ALIGNMENT 989 YS2-7i05.p1k chr14 1155 38 134474 135608 C 1118 97.05 1338 accept 0 ALIGNMENT 914 YS2-7i06.p1k chr04 1140 29 710105 711227 C 1112 94.42 1365 accept 0 ALIGNMENT 912 YS2-7i06.q1k chr04 39 1053 706618 707645 F 1015 97.34 1303 accept 0 ALIGNMENT 957 YS2-7i07.q1k chr14 1165 38 587949 589092 C 1128 96.10 1378 accept 0 ALIGNMENT 983 YS2-7i07.p1k chr14 60 1180 587897 589029 F 1121 96.88 1353 accept 0 ALIGNMENT 966 YS2-7i08.q1k chr10 1181 38 600649 601802 C 1144 95.54 1364 accept 0 ALIGNMENT 942 YS2-7i08.p1k chr10 32 1139 597667 598794 F 1108 95.58 1366 accept 0 ALIGNMENT 0 YS2-7i09.q1k vc_7 62 317 13525 13524 F 256 0.00 355 reject_low 13 ALIGNMENT 39 YS2-7i09.q1k vc_5 355 317 5025 5063 C 39 100.00 355 reject_low 12 ALIGNMENT 0 YS2-7i09.q1k vc_5 316 62 5064 5063 C 255 0.00 355 reject_low 12 ALIGNMENT 429 YS2-7i09.p1k vc_5 627 1 4025 4669 C 627 90.59 674 reject_vc 1 ALIGNMENT 426 YS2-7i09.p1k vc_2 627 1 1105 1749 C 627 90.43 674 reject_vc 4 ALIGNMENT 420 YS2-7i09.p1k vc_7 1 627 456 1100 F 627 90.11 674 reject_vc 6 ALIGNMENT 0 YS2-7i09.q1k vc_1 315 62 2512 2511 C 254 0.00 355 reject_low 8 ALIGNMENT 429 YS2-7i09.p1k vc_6 1 627 3712 4356 F 627 90.59 674 reject_vc 2 ALIGNMENT 40 YS2-7i09.q1k vc_2 355 316 2105 2144 C 40 100.00 355 reject_low 9 ALIGNMENT 240 YS2-7i09.q1k chr16 316 39 744389 744666 C 278 97.12 355 accept 0 ALIGNMENT 40 YS2-7i09.q1k vc_4 316 355 5832 5871 F 40 100.00 355 reject_low 11 ALIGNMENT 0 YS2-7i09.q1k vc_4 62 315 5832 5831 F 254 0.00 355 reject_low 11 ALIGNMENT 420 YS2-7i09.p1k vc_7 1 627 13918 14562 F 627 90.11 674 reject_vc 7 ALIGNMENT 36 YS2-7i09.q1k vc_5 352 317 1 36 C 36 100.00 355 reject_low 14 ALIGNMENT 0 YS2-7i09.q1k vc_2 315 62 2145 2144 C 254 0.00 355 reject_low 9 ALIGNMENT 38 YS2-7i09.q1k vc_7 318 355 13525 13562 F 38 100.00 355 reject_low 13 ALIGNMENT 426 YS2-7i09.p1k vc_1 627 1 1105 1749 C 627 90.43 674 reject_vc 3 ALIGNMENT 0 YS2-7i09.q1k vc_5 316 62 37 36 C 255 0.00 355 reject_low 14 ALIGNMENT 0 YS2-7i09.q1k chr16 355 317 744390 744389 C 39 0.00 355 accept 0 ALIGNMENT 40 YS2-7i09.q1k vc_3 355 316 2472 2511 C 40 100.00 355 reject_low 10 ALIGNMENT 40 YS2-7i09.q1k vc_1 355 316 2472 2511 C 40 100.00 355 reject_low 8 ALIGNMENT 426 YS2-7i09.p1k vc_3 627 1 1105 1749 C 627 90.43 674 reject_vc 5 ALIGNMENT 0 YS2-7i09.q1k vc_3 315 62 2512 2511 C 254 0.00 355 reject_low 10 ALIGNMENT 505 YS2-7i10.p1k chr02 955 180 763411 764169 C 776 90.34 1412 accept 0 ALIGNMENT 993 YS2-7i11.q1k chr01 1173 37 94316 95468 C 1137 97.36 1325 accept 0 ALIGNMENT 962 YS2-7i11.p1k chr01 84 1179 92755 93860 F 1096 96.72 1403 accept 0 ALIGNMENT 1060 YS2-7i14.q1k chr05 1217 32 349599 350801 C 1186 97.05 1326 accept 0 ALIGNMENT 1046 YS2-7i14.p1k chr05 30 1244 349045 350280 F 1215 96.21 1365 accept 0 ALIGNMENT 0 YS2-7i15.q1k vc_4 62 290 5832 5831 F 229 0.00 330 reject_low 4 ALIGNMENT 40 YS2-7i15.q1k vc_1 330 291 2472 2511 C 40 100.00 330 reject_low 2 ALIGNMENT 40 YS2-7i15.q1k vc_4 291 330 5832 5871 F 40 100.00 330 reject_low 4 ALIGNMENT 40 YS2-7i15.q1k vc_3 330 291 2472 2511 C 40 100.00 330 reject_low 3 ALIGNMENT 39 YS2-7i15.q1k vc_5 330 292 5025 5063 C 39 100.00 330 reject_low 5 ALIGNMENT 0 YS2-7i15.q1k chr04 291 330 1403380 1403379 F 40 0.00 330 accept_chi 0 ALIGNMENT 0 YS2-7i15.q1k vc_7 62 292 13525 13524 F 231 0.00 330 reject_low 6 ALIGNMENT 0 YS2-7i15.q1k vc_5 291 62 5064 5063 C 230 0.00 330 reject_low 5 ALIGNMENT 0 YS2-7i15.q1k vc_3 290 62 2512 2511 C 229 0.00 330 reject_low 3 ALIGNMENT 36 YS2-7i15.q1k vc_5 327 292 1 36 C 36 100.00 330 reject_low 7 ALIGNMENT 251 YS2-7i15.q1k chr04 31 290 1403121 1403380 F 260 100.00 330 accept_chi 0 ALIGNMENT 131 YS2-7i15.p1k chr04 319 178 1403118 1403259 C 142 97.89 338 accept_chi 1 ALIGNMENT 0 YS2-7i15.p1k chr04 338 320 1403119 1403118 C 19 0.00 338 accept_chi 1 ALIGNMENT 0 YS2-7i15.q1k vc_5 291 62 37 36 C 230 0.00 330 reject_low 7 ALIGNMENT 38 YS2-7i15.q1k vc_7 293 330 13525 13562 F 38 100.00 330 reject_low 6 ALIGNMENT 0 YS2-7i15.q1k vc_1 290 62 2512 2511 C 229 0.00 330 reject_low 2 ALIGNMENT 42 YS2-7i16.q1k vc_4 426 467 5830 5871 F 42 100.00 467 reject_low 4 ALIGNMENT 0 YS2-7i16.q1k vc_1 425 62 2514 2513 C 364 0.00 467 reject_low 2 ALIGNMENT 42 YS2-7i16.q1k vc_1 467 426 2472 2513 C 42 100.00 467 reject_low 2 ALIGNMENT 361 YS2-7i16.q1k chr15 426 39 900717 901105 C 388 99.48 467 accept_chi 0 ALIGNMENT 0 YS2-7i16.q1k vc_7 62 429 13525 13524 F 368 0.00 467 reject_low 6 ALIGNMENT 42 YS2-7i16.q1k vc_3 467 426 2472 2513 C 42 100.00 467 reject_low 3 ALIGNMENT 0 YS2-7i16.q1k vc_5 428 62 37 36 C 367 0.00 467 reject_low 7 ALIGNMENT 0 YS2-7i16.q1k vc_5 428 62 5064 5063 C 367 0.00 467 reject_low 5 ALIGNMENT 356 YS2-7i16.p1k chr15 28 415 900717 901105 F 388 98.97 434 accept_chi 1 ALIGNMENT 36 YS2-7i16.q1k vc_5 464 429 1 36 C 36 100.00 467 reject_low 7 ALIGNMENT 39 YS2-7i16.q1k vc_5 467 429 5025 5063 C 39 100.00 467 reject_low 5 ALIGNMENT 38 YS2-7i16.q1k vc_7 430 467 13525 13562 F 38 100.00 467 reject_low 6 ALIGNMENT 0 YS2-7i16.q1k vc_3 425 62 2514 2513 C 364 0.00 467 reject_low 3 ALIGNMENT 0 YS2-7i16.q1k chr15 467 427 900718 900717 C 41 0.00 467 accept_chi 0 ALIGNMENT 0 YS2-7i16.q1k vc_4 62 425 5830 5829 F 364 0.00 467 reject_low 4 ALIGNMENT 0 YS2-7i16.p1k chr15 416 434 901105 901104 F 19 0.00 434 accept_chi 1 ALIGNMENT 913 YS2-7i17.p1k chr04 35 1182 578889 580045 F 1148 94.51 1337 accept 0 ALIGNMENT 1059 YS2-7i17.q1k chr04 1320 29 580745 582046 C 1292 95.43 1345 accept 0 ALIGNMENT 41 YS2-7i18.q1k vc_2 794 754 2105 2145 C 41 100.00 1336 reject_low 13 ALIGNMENT 41 YS2-7i18.q1k vc_7 1008 956 6360 6411 C 53 94.34 1336|1,0 reject_low 11 ALIGNMENT 41 YS2-7i18.q1k vc_3 794 754 2472 2512 C 41 100.00 1336 reject_low 14 ALIGNMENT 36 YS2-7i18.q1k vc_5 791 756 1 36 C 36 100.00 1336 reject_low 18 ALIGNMENT 0 YS2-7i18.q1k vc_3 866 795 2473 2472 C 72 0.00 1336 reject_low 14 ALIGNMENT 0 YS2-7i18.q1k vc_7 62 756 63 62 F 695 0.00 1336 reject_low 16 ALIGNMENT 0 YS2-7i18.q1k vc_5 755 62 37 36 C 694 0.00 1336 reject_low 18 ALIGNMENT 145 YS2-7i18.q1k vc_4 794 957 6353 6514 F 164 97.56 1336|1,0 reject_low 9 ALIGNMENT 39 YS2-7i18.q1k vc_5 794 756 5025 5063 C 39 100.00 1336 reject_low 15 ALIGNMENT 254 YS2-7i18.q1k vc_2 794 1131 2164 2503 F 338 93.20 1336 reject_low 3 ALIGNMENT 0 YS2-7i18.q1k vc_7 795 866 13562 13561 F 72 0.00 1336 reject_low 17 ALIGNMENT 0 YS2-7i18.q1k vc_4 793 62 5813 5812 C 732 0.00 1336 reject_low 7 ALIGNMENT 38 YS2-7i18.q1k vc_7 757 794 63 100 F 38 100.00 1336 reject_low 16 ALIGNMENT 0 YS2-7i18.q1k chr09 754 866 171874 171873 F 113 0.00 1336 accept_chi 0 ALIGNMENT 0 YS2-7i18.q1k vc_1 62 793 2531 2530 F 732 0.00 1336 reject_low 2 ALIGNMENT 41 YS2-7i18.q1k vc_1 794 754 2472 2512 C 41 100.00 1336 reject_low 12 ALIGNMENT 0 YS2-7i18.q1k vc_4 62 753 5831 5830 F 692 0.00 1336 reject_low 9 ALIGNMENT 0 YS2-7i18.q1k vc_2 753 62 2146 2145 C 692 0.00 1336 reject_low 13 ALIGNMENT 0 YS2-7i18.q1k vc_5 866 792 2 1 C 75 0.00 1336 reject_low 18 ALIGNMENT 0 YS2-7i18.q1k vc_4 795 794 5872 6353 F 0 0.00 1336 reject_low 9 ALIGNMENT 0 YS2-7i18.q1k vc_7 793 62 2728 2727 C 732 0.00 1336 reject_low 6 ALIGNMENT 254 YS2-7i18.q1k vc_5 794 1131 2398 2737 F 338 93.20 1336 reject_low 5 ALIGNMENT 247 YS2-7i18.q1k vc_4 1131 794 5471 5812 C 338 92.60 1336 reject_low 7 ALIGNMENT 0 YS2-7i18.q1k vc_3 753 62 2513 2512 C 692 0.00 1336 reject_low 14 ALIGNMENT 41 YS2-7i18.q1k vc_4 754 794 5831 5871 F 41 100.00 1336 reject_low 9 ALIGNMENT 0 YS2-7i18.q1k vc_5 755 62 5064 5063 C 694 0.00 1336 reject_low 15 ALIGNMENT 38 YS2-7i18.q1k vc_7 757 794 13525 13562 F 38 100.00 1336 reject_low 17 ALIGNMENT 254 YS2-7i18.q1k vc_7 1131 794 2388 2727 C 338 93.20 1336 reject_low 6 ALIGNMENT 0 YS2-7i18.q1k vc_7 955 62 6412 6411 C 894 0.00 1336 reject_low 11 ALIGNMENT 0 YS2-7i18.p1k chr09 765 747 171159 171158 C 19 0.00 765 accept_chi 1 ALIGNMENT 606 YS2-7i18.p1k chr09 746 33 171158 171874 C 714 96.36 765 accept_chi 1 ALIGNMENT 0 YS2-7i18.q1k vc_1 753 62 2513 2512 C 692 0.00 1336 reject_low 12 ALIGNMENT 79 YS2-7i18.q1k vc_4 884 794 1446 1534 C 91 97.80 1336 reject_low 10 ALIGNMENT 145 YS2-7i18.q1k vc_4 794 957 126 287 F 164 97.56 1336 reject_low 8 ALIGNMENT 0 YS2-7i18.q1k vc_2 866 795 2106 2105 C 72 0.00 1336 reject_low 13 ALIGNMENT 0 YS2-7i18.q1k vc_7 62 756 13525 13524 F 695 0.00 1336 reject_low 17 ALIGNMENT 254 YS2-7i18.q1k vc_3 794 1131 2531 2870 F 338 93.20 1336 reject_low 4 ALIGNMENT 0 YS2-7i18.q1k vc_5 62 793 2398 2397 F 732 0.00 1336 reject_low 5 ALIGNMENT 0 YS2-7i18.q1k vc_4 62 793 126 125 F 732 0.00 1336 reject_low 8 ALIGNMENT 641 YS2-7i18.q1k chr09 38 753 171158 171874 F 716 97.91 1336 accept_chi 0 ALIGNMENT 0 YS2-7i18.q1k vc_2 62 793 2164 2163 F 732 0.00 1336 reject_low 3 ALIGNMENT 0 YS2-7i18.q1k vc_4 793 62 1535 1534 C 732 0.00 1336 reject_low 10 ALIGNMENT 0 YS2-7i18.q1k vc_7 795 866 100 99 F 72 0.00 1336 reject_low 16 ALIGNMENT 0 YS2-7i18.q1k vc_7 1007 1008 5172 6360 C 0 0.00 1336 reject_low 11 ALIGNMENT 68 YS2-7i18.q1k vc_7 1131 1007 5043 5172 C 125 86.40 1336|0,1 reject_low 11 ALIGNMENT 0 YS2-7i18.q1k vc_5 866 795 5026 5025 C 72 0.00 1336 reject_low 15 ALIGNMENT 0 YS2-7i18.q1k vc_1 866 795 2473 2472 C 72 0.00 1336 reject_low 12 ALIGNMENT 0 YS2-7i18.q1k vc_3 62 793 2531 2530 F 732 0.00 1336 reject_low 4 ALIGNMENT 254 YS2-7i18.q1k vc_1 794 1131 2531 2870 F 338 93.20 1336 reject_low 2 ALIGNMENT 964 YS2-7i19.p1k chr02 1130 29 739513 740634 C 1102 96.91 1290 accept 0 ALIGNMENT 1064 YS2-7i19.q1k chr02 38 1349 735664 736964 F 1312 94.05 1389 accept 0 ALIGNMENT 209 YS2-7i20.p1k chr16 30 495 806108 806574 F 466 83.48 515 ambiguous_trans 22 ALIGNMENT 419 YS2-7i20.p1k chr04 497 37 875841 876301 C 461 98.70 515 ambiguous_trans 11 ALIGNMENT 200 YS2-7i20.p1k chr10 495 30 476365 476831 C 466 82.83 515 ambiguous_trans 30 ALIGNMENT 0 YS2-7i20.p1k chr15 515 496 121691 121690 C 20 0.00 515 ambiguous_trans 27 ALIGNMENT 0 YS2-7i20.p1k chr13 484 515 374621 374620 F 32 0.00 515 ambiguous_trans 32 ALIGNMENT 0 YS2-7i20.p1k chr12 515 498 945215 945214 C 18 0.00 515 ambiguous_trans 9 ALIGNMENT 419 YS2-7i20.p1k chr15 497 37 974307 974767 C 461 98.70 515 ambiguous_trans 15 ALIGNMENT 416 YS2-7i20.p1k chr12 37 497 977211 977671 F 461 98.48 515 ambiguous_trans 16 ALIGNMENT 0 YS2-7i20.p1k chr12 496 515 477911 477910 F 20 0.00 515 ambiguous_trans 25 ALIGNMENT 398 YS2-7i20.p1k chr02 497 37 33666 34126 C 461 97.18 515 ambiguous_trans 19 ALIGNMENT 0 YS2-7i20.p1k chr06 515 498 141934 141933 C 18 0.00 515 ambiguous_trans 6 ALIGNMENT 0 YS2-7i20.p1k chr03 515 498 88836 88835 C 18 0.00 515 ambiguous_trans 10 ALIGNMENT 0 YS2-7i20.p1k chr16 515 496 848400 848399 C 20 0.00 515 ambiguous_trans 21 ALIGNMENT 419 YS2-7i20.p1k chr04 497 37 985190 985650 C 461 98.70 515 ambiguous_trans 12 ALIGNMENT 297 YS2-7i20.q1k vc_3 1 302 2689 2991 F 302 99.67 663 reject_vc 5 ALIGNMENT 0 YS2-7i20.p1k chr14 498 515 563967 563966 F 18 0.00 515 ambiguous_trans 13 ALIGNMENT 0 YS2-7i20.p1k chr13 515 496 200320 200319 C 20 0.00 515 ambiguous_trans 26 ALIGNMENT 422 YS2-7i20.p1k chr06 497 37 141933 142393 C 461 98.92 515 ambiguous_trans 6 ALIGNMENT 422 YS2-7i20.p1k chr12 497 37 945214 945674 C 461 98.92 515 ambiguous_trans 9 ALIGNMENT 0 YS2-7i20.p1k chr07 498 515 570678 570677 F 18 0.00 515 ambiguous_trans 7 ALIGNMENT 189 YS2-7i20.p1k chr13 30 483 374167 374621 F 454 82.38 515 ambiguous_trans 32 ALIGNMENT 202 YS2-7i20.p1k chr13 481 30 188166 188618 C 452 83.41 515 ambiguous_trans 29 ALIGNMENT 422 YS2-7i20.p1k chr07 37 497 570218 570678 F 461 98.92 515 ambiguous_trans 7 ALIGNMENT 297 YS2-7i20.q1k vc_2 1 302 2322 2624 F 302 99.67 663 reject_vc 4 ALIGNMENT 0 YS2-7i20.p1k chr10 515 496 476366 476365 C 20 0.00 515 ambiguous_trans 30 ALIGNMENT 0 YS2-7i20.q1k vc_4 237 62 113 112 C 176 0.00 663 reject_low 34 ALIGNMENT 128 YS2-7i20.q1k vc_4 307 611 1879 2188 F 305 82.62 663 reject_vc 18 ALIGNMENT 0 YS2-7i20.p1k chr15 515 498 974308 974307 C 18 0.00 515 ambiguous_trans 15 ALIGNMENT 212 YS2-7i20.p1k chr16 495 30 848399 848865 C 466 83.69 515 ambiguous_trans 21 ALIGNMENT 203 YS2-7i20.p1k chr04 495 30 1210678 1211144 C 466 83.05 515 ambiguous_trans 23 ALIGNMENT 0 YS2-7i20.q1k vc_4 237 62 6340 6339 C 176 0.00 663 reject_low 35 ALIGNMENT 368 YS2-7i20.q1k vc_4 418 1 5232 5654 C 418 96.65 663 reject_vc 2 ALIGNMENT 419 YS2-7i20.p1k chr14 37 497 563507 563967 F 461 98.70 515 ambiguous_trans 13 ALIGNMENT 242 YS2-7i20.q1k vc_7 302 53 4922 5172 C 250 99.20 663|0,1 reject_vc 20 ALIGNMENT 0 YS2-7i20.p1k chr04 515 498 875842 875841 C 18 0.00 515 ambiguous_trans 11 ALIGNMENT 0 YS2-7i20.q1k vc_7 303 303 4700 4921 C 1 0.00 663 reject_vc 20 ALIGNMENT 0 YS2-7i20.p1k chr13 496 515 358935 358934 F 20 0.00 515 ambiguous_trans 31 ALIGNMENT 203 YS2-7i20.p1k chr13 495 30 200319 200785 C 466 83.05 515 ambiguous_trans 26 ALIGNMENT 0 YS2-7i20.p1k chr14 515 496 523131 523130 C 20 0.00 515 ambiguous_trans 28 ALIGNMENT 0 YS2-7i20.p1k chr12 498 515 977671 977670 F 18 0.00 515 ambiguous_trans 16 ALIGNMENT 0 YS2-7i20.p1k chr13 515 482 188167 188166 C 34 0.00 515 ambiguous_trans 29 ALIGNMENT 0 YS2-7i20.p1k chr04 515 498 985191 985190 C 18 0.00 515 ambiguous_trans 12 ALIGNMENT 431 YS2-7i20.q1k vc_5 1 611 2556 3172 F 611 91.16 663 reject_vc 0 ALIGNMENT 0 YS2-7i20.p1k chr16 314 515 852380 852379 F 202 0.00 515 ambiguous_trans 33 ALIGNMENT 203 YS2-7i20.p1k chr12 30 495 477445 477911 F 466 83.05 515 ambiguous_trans 25 ALIGNMENT 0 YS2-7i20.p1k chr07 515 498 815478 815477 C 18 0.00 515 ambiguous_trans 8 ALIGNMENT 60 YS2-7i20.q1k vc_4 303 238 46 112 C 66 98.48 663 reject_low 34 ALIGNMENT 0 YS2-7i20.p1k chr04 515 496 1210679 1210678 C 20 0.00 515 ambiguous_trans 23 ALIGNMENT 0 YS2-7i20.p1k chr10 515 496 481950 481949 C 20 0.00 515 ambiguous_trans 24 ALIGNMENT 0 YS2-7i20.q1k vc_4 304 306 1615 1878 F 3 0.00 663 reject_vc 18 ALIGNMENT 0 YS2-7i20.q1k vc_4 62 237 1548 1547 F 176 0.00 663 reject_vc 18 ALIGNMENT 422 YS2-7i20.p1k chr07 497 37 815477 815937 C 461 98.92 515 ambiguous_trans 8 ALIGNMENT 0 YS2-7i20.p1k chr16 496 515 806574 806573 F 20 0.00 515 ambiguous_trans 22 ALIGNMENT 401 YS2-7i20.p1k chr04 37 497 515158 515618 F 461 97.40 515 ambiguous_trans 17 ALIGNMENT 0 YS2-7i20.p1k chr04 498 515 515618 515617 F 18 0.00 515 ambiguous_trans 17 ALIGNMENT 60 YS2-7i20.q1k vc_4 238 303 1548 1614 F 66 98.48 663 reject_vc 18 ALIGNMENT 60 YS2-7i20.q1k vc_4 303 238 6273 6339 C 66 98.48 663 reject_low 35 ALIGNMENT 51 YS2-7i20.q1k vc_7 54 3 6360 6411 C 52 100.00 663|1,0 reject_vc 20 ALIGNMENT 200 YS2-7i20.p1k chr13 30 495 358469 358935 F 466 82.83 515 ambiguous_trans 31 ALIGNMENT 74 YS2-7i20.q1k vc_7 418 304 4583 4699 C 115 90.43 663 reject_vc 20 ALIGNMENT 0 YS2-7i20.q1k vc_7 53 54 5172 6360 C 0 0.00 663 reject_vc 20 ALIGNMENT 203 YS2-7i20.p1k chr15 495 30 121690 122156 C 466 83.05 515 ambiguous_trans 27 ALIGNMENT 422 YS2-7i20.q1k vc_7 529 1 2036 2569 C 529 94.14 663 reject_vc 1 ALIGNMENT 204 YS2-7i20.p1k chr14 495 37 523130 523588 C 459 83.22 515 ambiguous_trans 28 ALIGNMENT 0 YS2-7i20.p1k chr02 515 498 33667 33666 C 18 0.00 515 ambiguous_trans 19 ALIGNMENT 135 YS2-7i20.p1k chr16 30 313 852096 852380 F 284 83.45 515 ambiguous_trans 33 ALIGNMENT 203 YS2-7i20.p1k chr10 495 30 481949 482415 C 466 83.05 515 ambiguous_trans 24 ALIGNMENT 419 YS2-7i20.p1k chr03 497 37 88835 89295 C 461 98.70 515 ambiguous_trans 10 ALIGNMENT 297 YS2-7i20.q1k vc_1 1 302 2689 2991 F 302 99.67 663 reject_vc 3 ALIGNMENT 419 YS2-7i20.p1k chr15 37 497 705538 705998 F 461 98.70 515 ambiguous_trans 14 ALIGNMENT 0 YS2-7i20.p1k chr15 498 515 705998 705997 F 18 0.00 515 ambiguous_trans 14 ALIGNMENT 66 YS2-7i22.q1k chrm 708 1018 71255 71536 F 311 82.96 1355 reject_low 1 ALIGNMENT 0 YS2-7i22.p1k chrm 858 512 71213 71212 C 347 0.00 1346 reject_low 2 ALIGNMENT 0 YS2-7i22.p1k chrm 462 242 71261 71260 C 221 0.00 1346 reject_low 2 ALIGNMENT 44 YS2-7i22.q1k chrm 852 795 69438 69496 C 58 93.10 1355 reject_low 4 ALIGNMENT 0 YS2-7i22.q1k chrm 804 62 62904 62903 C 743 0.00 1355 reject_low 5 ALIGNMENT 418 YS2-7i22.q1k chrm 32 706 70532 71213 F 675 96.30 1355 accept 0 ALIGNMENT 0 YS2-7i22.q1k chrm 794 62 69497 69496 C 733 0.00 1355 reject_low 4 ALIGNMENT 39 YS2-7i22.q1k chrm 803 851 71212 71260 F 49 93.88 1355 reject_low 7 ALIGNMENT 0 YS2-7i22.q1k chrm 788 62 69112 69111 C 727 0.00 1355 reject_low 3 ALIGNMENT 39 YS2-7i22.p1k chrm 511 463 71212 71260 C 49 93.88 1346 reject_low 2 ALIGNMENT 36 YS2-7i22.q1k chrm 856 805 66819 66868 C 52 92.31 1355 reject_low 6 ALIGNMENT 38 YS2-7i22.q1k chrm 855 805 62853 62903 C 51 92.16 1355 reject_low 5 ALIGNMENT 0 YS2-7i22.q1k chrm 804 62 66869 66868 C 743 0.00 1355 reject_low 6 ALIGNMENT 0 YS2-7i22.q1k chrm 707 799 71213 71212 F 93 0.00 1355 accept 0 ALIGNMENT 330 YS2-7i22.p1k chrm 1263 227 70538 71605 C 1037 87.17 1346 accept 0 ALIGNMENT 0 YS2-7i22.q1k chrm 62 802 71212 71211 F 741 0.00 1355 reject_low 7 ALIGNMENT 41 YS2-7i22.q1k chrm 851 789 69049 69111 C 63 90.48 1355 reject_low 3 ALIGNMENT 0 YS2-7i22.q1k chrm 62 707 71255 71254 F 646 0.00 1355 reject_low 1 ALIGNMENT 761 YS2-7i23.p1k chr13 1145 209 744991 745925 C 937 94.98 1309 accept 0 ALIGNMENT 919 YS2-7i23.q1k chr13 38 1140 741023 742116 F 1103 96.46 1265 accept 0 ALIGNMENT 0 YS2-7i24.q1k chr01 697 886 188578 188577 F 190 0.00 1235 reject_low 24 ALIGNMENT 246 YS2-7i24.q1k chr05 630 308 431496 431818 C 323 94.12 1235 reject_low 17 ALIGNMENT 0 YS2-7i24.q1k chr08 307 62 92096 92095 C 246 0.00 1235 reject_low 16 ALIGNMENT 225 YS2-7i24.q1k chr14 308 617 524730 525040 F 310 93.23 1235 reject_low 21 ALIGNMENT 0 YS2-7i24.q1k chr12 886 631 731681 731680 C 256 0.00 1235 reject_low 14 ALIGNMENT 21 YS2-7i24.q1k chr01 654 696 188536 188578 F 43 83.72 1235 reject_low 24 ALIGNMENT 249 YS2-7i24.q1k chr08 630 308 91773 92095 C 323 94.43 1235 reject_low 16 ALIGNMENT 0 YS2-7i24.q1k chr03 307 62 168929 168928 C 246 0.00 1235 reject_low 19 ALIGNMENT 0 YS2-7i24.q1k chr14 618 886 519474 519473 F 269 0.00 1235 reject_low 20 ALIGNMENT 59 YS2-7i24.q1k chr01 307 617 183135 183445 F 311 77.17 1235 reject_low 33 ALIGNMENT 0 YS2-7i24.q1k chr03 641 886 90768 90767 F 246 0.00 1235 reject_low 4 ALIGNMENT 0 YS2-7i24.q1k chr12 641 886 941520 941519 F 246 0.00 1235 reject_low 5 ALIGNMENT 0 YS2-7i24.q1k chr03 618 886 149784 149783 F 269 0.00 1235 reject_low 26 ALIGNMENT 0 YS2-7i24.q1k chr07 370 886 405210 405209 F 517 0.00 1235 reject_low 27 ALIGNMENT 23 YS2-7i24.q1k chr01 448 355 160109 160202 C 94 76.60 1235 reject_low 30 ALIGNMENT 256 YS2-7i24.q1k chr07 308 636 811452 811779 F 329 94.83 1235 reject_low 8 ALIGNMENT 256 YS2-7i24.q1k chr06 308 636 137908 138235 F 329 94.83 1235 reject_low 7 ALIGNMENT 42 YS2-7i24.q1k chr01 438 314 138865 138990 C 125 80.00 1235 reject_low 29 ALIGNMENT 52 YS2-7i24.q1k chr03 589 308 142798 143077 C 282 76.24 1235 reject_low 28 ALIGNMENT 0 YS2-7i24.q1k chr07 637 886 811779 811778 F 250 0.00 1235 reject_low 8 ALIGNMENT 21 YS2-7i24.q1k chr06 573 630 143869 143927 F 58 82.76 1235 reject_low 35 ALIGNMENT 256 YS2-7i24.q1k chr06 308 643 143535 143869 F 336 94.35 1235 reject_low 3 ALIGNMENT 252 YS2-7i24.q1k chr08 630 308 389190 389512 C 323 94.74 1235 reject_low 13 ALIGNMENT 0 YS2-7i24.q1k chr03 62 350 149523 149522 F 289 0.00 1235 reject_low 26 ALIGNMENT 357 YS2-7i24.q1k chr07 31 448 404729 405148 F 418 97.85 1235 reject_low 1 ALIGNMENT 33 YS2-7i24.q1k chr01 31 96 187348 187414 F 66 86.36 1235 reject_low 32 ALIGNMENT 0 YS2-7i24.q1k chr15 307 62 704397 704396 C 246 0.00 1235 reject_low 18 ALIGNMENT 175 YS2-7i24.q1k chr01 617 308 160262 160575 C 310 88.06 1235 reject_low 23 ALIGNMENT 0 YS2-7i24.q1k chr09 62 305 246215 246214 F 244 0.00 1235 reject_low 10 ALIGNMENT 0 YS2-7i24.q1k chr09 631 886 246539 246538 F 256 0.00 1235 reject_low 10 ALIGNMENT 0 YS2-7i24.q1k chr03 615 886 151822 151821 F 272 0.00 1235 reject_low 25 ALIGNMENT 0 YS2-7i24.q1k chr05 886 646 135604 135603 C 241 0.00 1235 reject_low 2 ALIGNMENT 51 YS2-7i24.q1k chr07 304 369 405145 405210 F 66 95.45 1235 reject_low 27 ALIGNMENT 0 YS2-7i24.q1k chr08 886 631 389191 389190 C 256 0.00 1235 reject_low 13 ALIGNMENT 0 YS2-7i24.q1k chr15 304 62 710028 710027 C 243 0.00 1235 reject_low 12 ALIGNMENT 250 YS2-7i24.q1k chr04 308 636 1352634 1352961 F 329 94.22 1235 reject_low 9 ALIGNMENT 0 YS2-7i24.q1k chr04 62 347 1352962 1352961 F 286 0.00 1235 reject_low 31 ALIGNMENT 0 YS2-7i24.q1k chr01 886 449 160110 160109 C 438 0.00 1235 reject_low 30 ALIGNMENT 27 YS2-7i24.q1k chr01 660 696 187454 187490 F 37 91.89 1235 reject_low 32,33 ALIGNMENT 0 YS2-7i24.q1k chr01 354 62 160203 160202 C 293 0.00 1235 reject_low 30 ALIGNMENT 0 YS2-7i24.q1k chr13 886 631 168360 168359 C 256 0.00 1235 reject_low 11 ALIGNMENT 0 YS2-7i24.q1k chr12 307 62 732003 732002 C 246 0.00 1235 reject_low 14 ALIGNMENT 0 YS2-7i24.q1k chr01 62 653 188536 188535 F 592 0.00 1235 reject_low 24 ALIGNMENT 22 YS2-7i24.q1k chr04 348 387 1352962 1353001 F 40 87.50 1235 reject_low 31 ALIGNMENT 0 YS2-7i24.q1k chr06 62 310 137658 137657 F 249 0.00 1235 reject_low 35 ALIGNMENT 0 YS2-7i24.q1k chr06 62 307 137908 137907 F 246 0.00 1235 reject_low 7 ALIGNMENT 0 YS2-7i24.q1k chr01 886 618 165851 165850 C 269 0.00 1235 reject_low 22 ALIGNMENT 0 YS2-7i24.q1k chr03 886 618 124155 124154 C 269 0.00 1235 reject_low 34 ALIGNMENT 177 YS2-7i24.q1k chr01 617 307 165850 166164 C 311 88.10 1235 reject_low 22 ALIGNMENT 0 YS2-7i24.q1k chr05 307 62 431819 431818 C 246 0.00 1235 reject_low 17 ALIGNMENT 231 YS2-7i24.q1k chr03 617 308 168618 168928 C 310 93.87 1235 reject_low 19 ALIGNMENT 259 YS2-7i24.q1k chr03 308 640 90437 90768 F 333 94.89 1235 reject_low 4 ALIGNMENT 93 YS2-7i24.q1k chr03 308 614 151518 151822 F 307 80.46 1235 reject_low 25 ALIGNMENT 0 YS2-7i24.q1k chr06 631 886 143927 143926 F 256 0.00 1235 reject_low 35 ALIGNMENT 0 YS2-7i24.q1k chr15 886 631 704075 704074 C 256 0.00 1235 reject_low 18 ALIGNMENT 0 YS2-7i24.q1k chr03 886 590 142799 142798 C 297 0.00 1235 reject_low 28 ALIGNMENT 0 YS2-7i24.q1k chr13 303 62 168686 168685 C 242 0.00 1235 reject_low 11 ALIGNMENT 0 YS2-7i24.q1k chr03 62 307 90437 90436 F 246 0.00 1235 reject_low 4 ALIGNMENT 0 YS2-7i24.q1k chr03 886 618 168619 168618 C 269 0.00 1235 reject_low 19 ALIGNMENT 0 YS2-7i24.q1k chr03 307 62 143078 143077 C 246 0.00 1235 reject_low 28 ALIGNMENT 0 YS2-7i24.q1k chr06 637 886 138235 138234 F 250 0.00 1235 reject_low 7 ALIGNMENT 249 YS2-7i24.q1k chr15 630 305 709702 710027 C 326 94.17 1235 reject_low 12 ALIGNMENT 0 YS2-7i24.q1k chr04 388 886 1353001 1353000 F 499 0.00 1235 reject_low 31 ALIGNMENT 252 YS2-7i24.q1k chr12 630 308 731680 732002 C 323 94.74 1235 reject_low 14 ALIGNMENT 53 YS2-7i24.q1k chr06 311 570 137658 137902 F 260 78.46 1235 reject_low 35 ALIGNMENT 0 YS2-7i24.q1k chr04 637 886 1352961 1352960 F 250 0.00 1235 reject_low 9 ALIGNMENT 22 YS2-7i24.q1k chr03 95 48 126318 126365 C 48 85.42 1235 reject_low 34 ALIGNMENT 0 YS2-7i24.q1k chr12 62 307 946816 946815 F 246 0.00 1235 reject_low 6 ALIGNMENT 256 YS2-7i24.q1k chr05 645 304 135603 135943 C 342 93.86 1235 reject_low 2 ALIGNMENT 0 YS2-7i24.q1k chr12 641 886 947147 947146 F 246 0.00 1235 reject_low 6 ALIGNMENT 0 YS2-7i24.q1k chr05 886 631 431497 431496 C 256 0.00 1235 reject_low 17 ALIGNMENT 0 YS2-7i24.q1k chr14 618 886 525040 525039 F 269 0.00 1235 reject_low 21 ALIGNMENT 0 YS2-7i24.q1k chr14 62 307 524730 524729 F 246 0.00 1235 reject_low 21 ALIGNMENT 249 YS2-7i24.q1k chr05 308 630 62142 62464 F 323 94.43 1235 reject_low 15 ALIGNMENT 85 YS2-7i24.q1k chr03 617 308 124154 124462 C 310 79.35 1235 reject_low 34 ALIGNMENT 0 YS2-7i24.q1k chr05 631 886 62464 62463 F 256 0.00 1235 reject_low 15 ALIGNMENT 0 YS2-7i24.q1k chr15 886 631 709703 709702 C 256 0.00 1235 reject_low 12 ALIGNMENT 0 YS2-7i24.q1k chr06 571 572 137903 143868 F 2 0.00 1235 reject_low 35 ALIGNMENT 955 YS2-7i24.q1k chr01 31 1197 189142 190324 F 1167 95.29 1235 accept 0 ALIGNMENT 0 YS2-7i24.q1k chr03 62 307 151518 151517 F 246 0.00 1235 reject_low 25 ALIGNMENT 225 YS2-7i24.q1k chr14 308 617 519164 519474 F 310 93.23 1235 reject_low 20 ALIGNMENT 0 YS2-7i24.q1k chr05 303 62 135944 135943 C 242 0.00 1235 reject_low 2 ALIGNMENT 0 YS2-7i24.q1k chr01 307 62 160576 160575 C 246 0.00 1235 reject_low 23 ALIGNMENT 0 YS2-7i24.q1k chr07 62 303 405145 405144 F 242 0.00 1235 reject_low 27 ALIGNMENT 0 YS2-7i24.q1k chr01 62 306 183135 183134 F 245 0.00 1235 reject_low 33 ALIGNMENT 0 YS2-7i24.q1k chr03 307 96 124463 126317 C 212 0.00 1235 reject_low 34 ALIGNMENT 0 YS2-7i24.q1k chr08 307 62 389513 389512 C 246 0.00 1235 reject_low 13 ALIGNMENT 249 YS2-7i24.q1k chr13 630 304 168359 168685 C 327 94.19 1235 reject_low 11 ALIGNMENT 254 YS2-7i24.q1k chr09 306 630 246215 246539 F 325 94.77 1235 reject_low 10 ALIGNMENT 0 YS2-7i24.q1k chr05 62 307 62142 62141 F 246 0.00 1235 reject_low 15 ALIGNMENT 0 YS2-7i24.q1k chr07 62 307 811452 811451 F 246 0.00 1235 reject_low 8 ALIGNMENT 0 YS2-7i24.q1k chr01 697 886 187490 187489 F 190 0.00 1235 reject_low 32,33 ALIGNMENT 0 YS2-7i24.q1k chr14 62 307 519164 519163 F 246 0.00 1235 reject_low 20 ALIGNMENT 0 YS2-7i24.q1k chr06 62 307 143535 143534 F 246 0.00 1235 reject_low 3 ALIGNMENT 0 YS2-7i24.q1k chr01 886 439 138866 138865 C 448 0.00 1235 reject_low 29 ALIGNMENT 0 YS2-7i24.q1k chr12 62 307 941189 941188 F 246 0.00 1235 reject_low 5 ALIGNMENT 259 YS2-7i24.q1k chr12 308 640 941189 941520 F 333 94.89 1235 reject_low 5 ALIGNMENT 0 YS2-7i24.q1k chr01 97 659 187415 187453 F 563 0.00 1235 reject_low 32 ALIGNMENT 0 YS2-7i24.q1k chr08 886 631 91774 91773 C 256 0.00 1235 reject_low 16 ALIGNMENT 0 YS2-7i24.q1k chr04 62 307 1352634 1352633 F 246 0.00 1235 reject_low 9 ALIGNMENT 0 YS2-7i24.q1k chr01 886 618 160263 160262 C 269 0.00 1235 reject_low 23 ALIGNMENT 0 YS2-7i24.q1k chr01 313 62 138991 138990 C 252 0.00 1235 reject_low 29 ALIGNMENT 1044 YS2-7i24.p1k chr01 1182 32 192679 193837 C 1151 97.31 1293 accept 0 ALIGNMENT 0 YS2-7i24.q1k chr06 644 886 143869 143868 F 243 0.00 1235 reject_low 3 ALIGNMENT 246 YS2-7i24.q1k chr15 630 308 704074 704396 C 323 94.12 1235 reject_low 18 ALIGNMENT 259 YS2-7i24.q1k chr12 308 640 946816 947147 F 333 94.89 1235 reject_low 6 ALIGNMENT 0 YS2-7i24.q1k chr07 449 886 405148 405147 F 438 0.00 1235 reject_low 1 ALIGNMENT 70 YS2-7i24.q1k chr03 351 617 149523 149784 F 267 79.03 1235 reject_low 26 ALIGNMENT 0 YS2-7i24.q1k chr01 306 62 166165 166164 C 245 0.00 1235 reject_low 22 ALIGNMENT 0 YS2-7i24.q1k chr01 618 659 183446 187453 F 42 0.00 1235 reject_low 33 ALIGNMENT 0 YS2-7j03.p1k chr04 903 149 778749 778748 C 755 0.00 1331 reject_low 1 ALIGNMENT 865 YS2-7j03.p1k chr13 1050 72 86028 87016 C 979 97.34 1331 accept 0 ALIGNMENT 0 YS2-7j03.p1k chr02 903 149 68280 68279 C 755 0.00 1331 reject_low 2 ALIGNMENT 0 YS2-7j03.p1k chr09 145 903 105834 105833 F 759 0.00 1331 reject_low 5 ALIGNMENT 0 YS2-7j03.p1k chr10 132 903 470094 470093 F 772 0.00 1331 reject_low 6 ALIGNMENT 1009 YS2-7j03.q1k chr13 35 1178 82750 83902 F 1144 96.94 1332 accept 0 ALIGNMENT 0 YS2-7j03.p1k chr13 903 147 587630 587629 C 757 0.00 1331 reject_low 3 ALIGNMENT 0 YS2-7j03.p1k chr16 903 148 650482 650481 C 756 0.00 1331 reject_low 4 ALIGNMENT 36 YS2-7j03.p1k chr04 148 71 778748 778825 C 78 97.44 1331 reject_low 1 ALIGNMENT 0 YS2-7j03.p1k chr02 76 62 68351 68350 C 15 0.00 1331 reject_low 2 ALIGNMENT 24 YS2-7j03.p1k chr09 70 144 105759 105834 F 75 94.67 1331 reject_low 5 ALIGNMENT 23 YS2-7j03.p1k chr10 74 131 470037 470094 F 58 98.28 1331 reject_low 6 ALIGNMENT 0 YS2-7j03.p1k chr13 71 68 87017 87059 C 4 0.00 1331 accept 0 ALIGNMENT 31 YS2-7j03.p1k chr13 146 72 587629 587703 C 75 97.33 1331 reject_low 3 ALIGNMENT 29 YS2-7j03.p1k chr13 67 30 87060 87098 C 38 97.37 1331 accept 0 ALIGNMENT 33 YS2-7j03.p1k chr02 148 77 68279 68350 C 72 97.22 1331 reject_low 2 ALIGNMENT 28 YS2-7j03.p1k chr16 147 72 650481 650556 C 76 96.05 1331 reject_low 4 ALIGNMENT 939 YS2-7j04.p1k chr07 30 1078 533315 534376 F 1049 97.43 1324 accept_trans 0 ALIGNMENT 46 YS2-7j04.q1k chr07 84 38 543052 543098 C 47 97.87 111 accept_trans 0 ALIGNMENT 200 YS2-7j05.p1k chr09 244 29 4927 5144 C 216 98.15 262 reject_low 9 ALIGNMENT 0 YS2-7j05.q1k chr09 257 297 5144 5143 F 41 0.00 297 reject_low 1 ALIGNMENT 161 YS2-7j05.p1k chr12 29 201 1066924 1067097 F 173 98.27 262 accept_tel 0 ALIGNMENT 203 YS2-7j05.q1k chr14 40 256 4539 4755 F 217 98.16 297 reject_low 7 ALIGNMENT 0 YS2-7j05.q1k chr12 82 62 1067098 1067097 C 21 0.00 297 reject_low 19 ALIGNMENT 0 YS2-7j05.p1k chr15 245 262 1086688 1086687 F 18 0.00 262 reject_low 13 ALIGNMENT 211 YS2-7j05.q1k chr09 40 256 4927 5144 F 217 99.54 297 reject_low 1 ALIGNMENT 192 YS2-7j05.p1k chr16 244 29 4448 4664 C 216 96.76 262 reject_low 17 ALIGNMENT 0 YS2-7j05.q1k vc_1 256 62 2513 2512 C 195 0.00 297 reject_low 21 ALIGNMENT 209 YS2-7j05.q1k chr15 256 40 1086472 1086688 C 217 99.08 297 reject_low 4 ALIGNMENT 36 YS2-7j05.q1k vc_5 294 259 1 36 C 36 100.00 297 reject_low 27 ALIGNMENT 0 YS2-7j05.q1k chr05 62 82 4586 4585 F 21 0.00 297 reject_low 18 ALIGNMENT 41 YS2-7j05.q1k vc_2 297 257 2105 2145 C 41 100.00 297 reject_low 22 ALIGNMENT 41 YS2-7j05.q1k vc_4 257 297 5831 5871 F 41 100.00 297 reject_low 24 ALIGNMENT 0 YS2-7j05.q1k vc_2 256 62 2146 2145 C 195 0.00 297 reject_low 22 ALIGNMENT 209 YS2-7j05.q1k chr04 256 40 1527307 1527523 C 217 99.08 297 reject_low 3 ALIGNMENT 203 YS2-7j05.q1k chr05 256 40 572136 572352 C 217 98.16 297 reject_low 5 ALIGNMENT 171 YS2-7j05.q1k chr12 256 83 1066924 1067097 C 174 100.00 297 reject_low 19 ALIGNMENT 0 YS2-7j05.p1k chr05 262 202 4587 4586 C 61 0.00 262 reject_low 20 ALIGNMENT 0 YS2-7j05.p1k chr16 262 245 4449 4448 C 18 0.00 262 reject_low 17 ALIGNMENT 198 YS2-7j05.p1k chr12 29 244 1073508 1073724 F 216 97.69 262 reject_low 12 ALIGNMENT 0 YS2-7j05.q1k chr07 297 257 1086214 1086213 C 41 0.00 297 reject_low 6 ALIGNMENT 0 YS2-7j05.q1k vc_5 258 62 5064 5063 C 197 0.00 297 reject_low 25 ALIGNMENT 0 YS2-7j05.p1k chr14 262 245 4540 4539 C 18 0.00 262 reject_low 16 ALIGNMENT 41 YS2-7j05.q1k vc_1 297 257 2472 2512 C 41 100.00 297 reject_low 21 ALIGNMENT 39 YS2-7j05.q1k vc_5 297 259 5025 5063 C 39 100.00 297 reject_low 25 ALIGNMENT 0 YS2-7j05.q1k vc_4 62 256 5831 5830 F 195 0.00 297 reject_low 24 ALIGNMENT 161 YS2-7j05.p1k chr05 201 29 4586 4759 C 173 98.27 262 reject_low 20 ALIGNMENT 0 YS2-7j05.p1k chr12 245 262 1073724 1073723 F 18 0.00 262 reject_low 12 ALIGNMENT 0 YS2-7j05.p1k chr10 262 245 4911 4910 C 18 0.00 262 reject_low 10 ALIGNMENT 171 YS2-7j05.q1k chr05 83 256 4586 4759 F 174 100.00 297 reject_low 18 ALIGNMENT 0 YS2-7j05.p1k chr04 245 262 1527523 1527522 F 18 0.00 262 reject_low 11 ALIGNMENT 0 YS2-7j05.q1k vc_3 256 62 2513 2512 C 195 0.00 297 reject_low 23 ALIGNMENT 0 YS2-7j05.p1k chr05 245 262 572352 572351 F 18 0.00 262 reject_low 14 ALIGNMENT 203 YS2-7j05.q1k chr16 40 256 4448 4664 F 217 98.16 297 reject_low 8 ALIGNMENT 192 YS2-7j05.p1k chr07 29 244 1086213 1086429 F 216 96.76 262 reject_low 15 ALIGNMENT 198 YS2-7j05.p1k chr15 29 244 1086472 1086688 F 216 97.69 262 reject_low 13 ALIGNMENT 41 YS2-7j05.q1k vc_3 297 257 2472 2512 C 41 100.00 297 reject_low 23 ALIGNMENT 211 YS2-7j05.q1k chr10 40 256 4910 5127 F 217 99.54 297 reject_low 2 ALIGNMENT 0 YS2-7j05.q1k vc_5 258 62 37 36 C 197 0.00 297 reject_low 27 ALIGNMENT 0 YS2-7j05.q1k chr15 297 257 1086473 1086472 C 41 0.00 297 reject_low 4 ALIGNMENT 0 YS2-7j05.p1k chr07 245 262 1086429 1086428 F 18 0.00 262 reject_low 15 ALIGNMENT 203 YS2-7j05.q1k chr07 256 40 1086213 1086429 C 217 98.16 297 reject_low 6 ALIGNMENT 192 YS2-7j05.p1k chr05 29 244 572136 572352 F 216 96.76 262 reject_low 14 ALIGNMENT 38 YS2-7j05.q1k vc_7 260 297 13525 13562 F 38 100.00 297 reject_low 26 ALIGNMENT 209 YS2-7j05.q1k chr12 256 40 1073508 1073724 C 217 99.08 297 accept_tel 0 ALIGNMENT 0 YS2-7j05.q1k vc_7 62 259 13525 13524 F 198 0.00 297 reject_low 26 ALIGNMENT 0 YS2-7j05.p1k chr12 202 262 1067097 1067096 F 61 0.00 262 accept_tel 0 ALIGNMENT 0 YS2-7j05.q1k chr05 257 297 4759 4758 F 41 0.00 297 reject_low 18 ALIGNMENT 0 YS2-7j05.q1k chr04 297 257 1527308 1527307 C 41 0.00 297 reject_low 3 ALIGNMENT 198 YS2-7j05.p1k chr04 29 244 1527307 1527523 F 216 97.69 262 reject_low 11 ALIGNMENT 0 YS2-7j05.q1k chr05 297 257 572137 572136 C 41 0.00 297 reject_low 5 ALIGNMENT 0 YS2-7j05.q1k chr12 297 257 1073509 1073508 C 41 0.00 297 accept_tel 0 ALIGNMENT 192 YS2-7j05.p1k chr14 244 29 4539 4755 C 216 96.76 262 reject_low 16 ALIGNMENT 0 YS2-7j05.q1k chr14 257 297 4755 4754 F 41 0.00 297 reject_low 7 ALIGNMENT 0 YS2-7j05.q1k chr10 257 297 5127 5126 F 41 0.00 297 reject_low 2 ALIGNMENT 0 YS2-7j05.q1k chr12 297 257 1066925 1066924 C 41 0.00 297 reject_low 19 ALIGNMENT 200 YS2-7j05.p1k chr10 244 29 4910 5127 C 216 98.15 262 reject_low 10 ALIGNMENT 0 YS2-7j05.q1k chr16 257 297 4664 4663 F 41 0.00 297 reject_low 8 ALIGNMENT 0 YS2-7j05.p1k chr09 262 245 4928 4927 C 18 0.00 262 reject_low 9 ALIGNMENT 959 YS2-7j06.p1k chr03 35 1123 158766 159871 F 1089 97.15 1355 accept 0 ALIGNMENT 51 YS2-7j06.q1k chr03 84 32 160777 160829 C 53 100.00 111 accept 0 ALIGNMENT 833 YS2-7j08.p1k chr04 30 1029 1187495 1188505 F 1000 97.70 1357 accept 0 ALIGNMENT 50 YS2-7j08.q1k chr04 90 37 1193438 1193491 C 54 100.00 112 accept 0 ALIGNMENT 187 YS2-7j09.q1k chr09 158 387 7015 7244 F 230 100.00 1329 reject_low 1 ALIGNMENT 0 YS2-7j09.q1k chr09 62 157 7015 7014 F 96 0.00 1329 reject_low 1 ALIGNMENT 187 YS2-7j09.q1k chr10 158 387 6998 7227 F 230 100.00 1329 reject_low 2 ALIGNMENT 0 YS2-7j09.q1k chr10 62 157 6998 6997 F 96 0.00 1329 reject_low 2 ALIGNMENT 798 YS2-7j09.q1k chrm 1077 39 40390 41436 C 1039 96.82 1329 accept 0 ALIGNMENT 0 YS2-7j09.q1k chr10 388 905 7227 7226 F 518 0.00 1329 reject_low 2 ALIGNMENT 0 YS2-7j09.q1k chr09 388 905 7244 7243 F 518 0.00 1329 reject_low 1 ALIGNMENT 660 YS2-7j09.p1k chrm 34 1058 39278 40309 F 1025 95.41 1300 accept 0 ALIGNMENT 45 YS2-7j10.q1k chr13 34 89 229003 229056 F 56 96.43 116 accept 0 ALIGNMENT 772 YS2-7j10.p1k chr13 1098 32 232663 233719 C 1067 92.22 1263 accept 0 ALIGNMENT 77 YS2-7j11.q1k chr15 1070 971 301098 301198 C 100 93.00 1333 reject_low 29 ALIGNMENT 283 YS2-7j11.p1k chr10 143 465 538017 538338 F 323 98.45 1356 reject_low 24 ALIGNMENT 0 YS2-7j11.p1k chr08 189 62 389803 389802 C 128 0.00 1356 reject_low 39 ALIGNMENT 280 YS2-7j11.p1k chr07 143 452 817079 817387 F 310 99.35 1356 reject_low 27 ALIGNMENT 297 YS2-7j11.p1k chr04 475 143 519312 519643 C 333 98.80 1356 reject_low 13 ALIGNMENT 0 YS2-7j11.p1k chr04 928 216 513515 513514 C 713 0.00 1356 reject_low 40 ALIGNMENT 0 YS2-7j11.p1k chr14 928 306 561501 561500 C 623 0.00 1356 reject_low 41 ALIGNMENT 0 YS2-7j11.p1k chr15 142 62 704397 704396 C 81 0.00 1356 reject_low 4 ALIGNMENT 0 YS2-7j11.p1k chr03 62 132 151508 151507 F 71 0.00 1356 reject_low 32 ALIGNMENT 95 YS2-7j11.q1k chr14 1070 956 568117 568233 C 115 94.78 1333 reject_low 1 ALIGNMENT 0 YS2-7j11.p1k chr12 928 467 731680 731679 C 462 0.00 1356 reject_low 12 ALIGNMENT 81 YS2-7j11.q1k chr01 1070 959 139155 139267 C 112 91.96 1333 reject_low 6 ALIGNMENT 0 YS2-7j11.p1k chr04 928 476 519313 519312 C 453 0.00 1356 reject_low 13 ALIGNMENT 306 YS2-7j11.p1k chr15 483 143 704056 704396 C 341 98.83 1356 reject_low 4 ALIGNMENT 0 YS2-7j11.q1k chr01 958 62 139268 139267 C 897 0.00 1333 reject_low 6 ALIGNMENT 0 YS2-7j11.p1k chr08 928 294 389699 389698 C 635 0.00 1356 reject_low 39 ALIGNMENT 270 YS2-7j11.p1k chr14 143 478 524730 525066 F 336 95.83 1356 reject_low 21 ALIGNMENT 935 YS2-7j11.p1k chr08 1131 31 388514 389624 C 1101 96.82 1356 accept 0 ALIGNMENT 0 YS2-7j11.p1k chr04 928 466 513696 513695 C 463 0.00 1356 reject_low 20 ALIGNMENT 92 YS2-7j11.q1k chr14 1070 956 547096 547212 C 115 93.91 1333 reject_low 2 ALIGNMENT 0 YS2-7j11.p1k chr10 142 62 204036 204035 C 81 0.00 1356 reject_low 14 ALIGNMENT 0 YS2-7j11.p1k chr13 928 482 168344 168343 C 447 0.00 1356 reject_low 3 ALIGNMENT 276 YS2-7j11.p1k chr03 468 143 168602 168928 C 326 97.24 1356 reject_low 28 ALIGNMENT 0 YS2-7j11.p1k chr04 142 62 519644 519643 C 81 0.00 1356 reject_low 13 ALIGNMENT 0 YS2-7j11.p1k chr12 140 62 732005 732004 C 79 0.00 1356 reject_low 12 ALIGNMENT 279 YS2-7j11.p1k chr14 465 142 567672 567994 C 324 97.84 1356 reject_low 25 ALIGNMENT 0 YS2-7j11.p1k chr10 928 294 537833 537832 C 635 0.00 1356 reject_low 38 ALIGNMENT 0 YS2-7j11.p1k chr03 479 928 90771 90770 F 450 0.00 1356 reject_low 16 ALIGNMENT 0 YS2-7j11.p1k chr14 479 928 525066 525065 F 450 0.00 1356 reject_low 21 ALIGNMENT 0 YS2-7j11.p1k chr10 175 62 537949 537948 C 114 0.00 1356 reject_low 38 ALIGNMENT 0 YS2-7j11.p1k chr05 62 142 62142 62141 F 81 0.00 1356 reject_low 5 ALIGNMENT 309 YS2-7j11.p1k chr05 143 476 62142 62475 F 334 99.70 1356 reject_low 5 ALIGNMENT 0 YS2-7j11.p1k chr12 476 928 941520 941519 F 453 0.00 1356 reject_low 18 ALIGNMENT 0 YS2-7j11.p1k chr07 62 142 811452 811451 F 81 0.00 1356 reject_low 26 ALIGNMENT 0 YS2-7j11.p1k chr10 388 928 204224 204223 F 541 0.00 1356 reject_low 37 ALIGNMENT 298 YS2-7j11.p1k chr12 466 141 731679 732004 C 326 99.39 1356 reject_low 12 ALIGNMENT 0 YS2-7j11.q1k chr14 955 62 547213 547212 C 894 0.00 1333 reject_low 2 ALIGNMENT 0 YS2-7j11.p1k chr04 142 62 514017 514016 C 81 0.00 1356 reject_low 20 ALIGNMENT 109 YS2-7j11.p1k chr03 133 465 151508 151838 F 333 81.38 1356 reject_low 32 ALIGNMENT 86 YS2-7j11.q1k chr15 1070 971 464452 464552 C 100 96.00 1333 reject_low 11 ALIGNMENT 0 YS2-7j11.p1k chr10 466 928 538338 538337 F 463 0.00 1356 reject_low 24 ALIGNMENT 0 YS2-7j11.p1k chr14 469 928 519490 519489 F 460 0.00 1356 reject_low 31 ALIGNMENT 79 YS2-7j11.q1k chr13 971 1070 196068 196169 F 100 94.00 1333 reject_low 23 ALIGNMENT 0 YS2-7j11.p1k chr10 928 477 203704 203703 C 452 0.00 1356 reject_low 14 ALIGNMENT 0 YS2-7j11.p1k chr03 466 928 151838 151837 F 463 0.00 1356 reject_low 32 ALIGNMENT 0 YS2-7j11.q1k chr06 970 62 101473 101472 C 909 0.00 1333 reject_low 22 ALIGNMENT 0 YS2-7j11.p1k chr14 928 466 567673 567672 C 463 0.00 1356 reject_low 25 ALIGNMENT 0 YS2-7j11.p1k chr03 928 469 168603 168602 C 460 0.00 1356 reject_low 28 ALIGNMENT 287 YS2-7j11.p1k chr03 143 478 90437 90771 F 336 97.62 1356 reject_low 16 ALIGNMENT 64 YS2-7j11.p1k chr03 424 143 142798 143077 C 282 77.30 1356 reject_low 36 ALIGNMENT 65 YS2-7j11.p1k chr07 455 342 817418 817532 C 114 87.72 1356 reject_low 35 ALIGNMENT 49 YS2-7j11.p1k chr10 197 387 204036 204224 F 191 79.58 1356 reject_low 37 ALIGNMENT 994 YS2-7j11.q1k chr08 40 1191 387963 389133 F 1152 96.70 1333 accept 0 ALIGNMENT 0 YS2-7j11.p1k chr14 62 142 524730 524729 F 81 0.00 1356 reject_low 21 ALIGNMENT 0 YS2-7j11.p1k chr14 779 928 568233 568232 F 150 0.00 1356 reject_low 1 ALIGNMENT 0 YS2-7j11.p1k chr03 62 175 149513 149512 F 114 0.00 1356 reject_low 34 ALIGNMENT 280 YS2-7j11.p1k chr07 143 465 811452 811773 F 323 98.14 1356 reject_low 26 ALIGNMENT 0 YS2-7j11.p1k chr14 928 478 726614 726613 C 451 0.00 1356 reject_low 17 ALIGNMENT 290 YS2-7j11.p1k chr14 477 143 726613 726946 C 335 97.91 1356 reject_low 17 ALIGNMENT 285 YS2-7j11.p1k chr12 143 475 941189 941520 F 333 97.60 1356 reject_low 18 ALIGNMENT 0 YS2-7j11.p1k chr05 142 62 431819 431818 C 81 0.00 1356 reject_low 10 ALIGNMENT 0 YS2-7j11.p1k chr03 477 928 149807 149806 F 452 0.00 1356 reject_low 34 ALIGNMENT 0 YS2-7j11.p1k chr03 928 425 142799 142798 C 504 0.00 1356 reject_low 36 ALIGNMENT 42 YS2-7j11.p1k chr10 293 176 537832 537948 C 118 81.36 1356 reject_low 38 ALIGNMENT 0 YS2-7j11.p1k chr13 135 62 168689 168688 C 74 0.00 1356 reject_low 3 ALIGNMENT 0 YS2-7j11.p1k chr09 476 928 246549 246548 F 453 0.00 1356 reject_low 7 ALIGNMENT 0 YS2-7j11.q1k chr12 965 62 92655 92654 C 904 0.00 1333 reject_low 9 ALIGNMENT 0 YS2-7j11.p1k chr15 928 484 704057 704056 C 445 0.00 1356 reject_low 4 ALIGNMENT 0 YS2-7j11.p1k chr07 62 142 817079 817078 F 81 0.00 1356 reject_low 27 ALIGNMENT 0 YS2-7j11.q1k chr15 970 62 301199 301198 C 909 0.00 1333 reject_low 29 ALIGNMENT 0 YS2-7j11.p1k chr10 62 196 204036 204035 F 135 0.00 1356 reject_low 37 ALIGNMENT 0 YS2-7j11.p1k chr08 928 473 91767 91766 C 456 0.00 1356 reject_low 15 ALIGNMENT 25 YS2-7j11.p1k chr14 305 199 561500 561606 C 107 79.44 1356 reject_low 41 ALIGNMENT 0 YS2-7j11.p1k chr14 141 62 567995 567994 C 80 0.00 1356 reject_low 25 ALIGNMENT 28 YS2-7j11.p1k chr04 215 143 513514 513586 C 73 82.19 1356 reject_low 40 ALIGNMENT 285 YS2-7j11.p1k chr12 143 475 946816 947147 F 333 97.60 1356 reject_low 19 ALIGNMENT 0 YS2-7j11.p1k chr14 142 62 562366 562365 C 81 0.00 1356 reject_low 30 ALIGNMENT 0 YS2-7j11.p1k chr12 62 142 946816 946815 F 81 0.00 1356 reject_low 19 ALIGNMENT 108 YS2-7j11.p1k chr14 660 778 547095 547212 F 119 97.48 1356 reject_low 2 ALIGNMENT 0 YS2-7j11.p1k chr03 928 469 124139 124138 C 460 0.00 1356 reject_low 33 ALIGNMENT 0 YS2-7j11.p1k chr07 453 928 817387 817386 F 476 0.00 1356 reject_low 27 ALIGNMENT 0 YS2-7j11.p1k chr08 142 62 92096 92095 C 81 0.00 1356 reject_low 15 ALIGNMENT 0 YS2-7j11.p1k chr03 142 62 168929 168928 C 81 0.00 1356 reject_low 28 ALIGNMENT 85 YS2-7j11.q1k chr12 1070 966 92548 92654 C 105 94.29 1333 reject_low 9 ALIGNMENT 0 YS2-7j11.p1k chr14 62 659 547095 547094 F 598 0.00 1356 reject_low 2 ALIGNMENT 0 YS2-7j11.p1k chr03 142 62 143078 143077 C 81 0.00 1356 reject_low 36 ALIGNMENT 42 YS2-7j11.p1k chr08 293 190 389698 389802 C 104 82.69 1356 reject_low 39 ALIGNMENT 0 YS2-7j11.p1k chr15 62 142 664814 664813 F 81 0.00 1356 reject_low 8 ALIGNMENT 105 YS2-7j11.p1k chr03 468 142 124138 124463 C 327 80.73 1356 reject_low 33 ALIGNMENT 277 YS2-7j11.p1k chr14 465 143 562044 562365 C 323 97.83 1356 reject_low 30 ALIGNMENT 270 YS2-7j11.p1k chr14 143 468 519164 519490 F 326 96.63 1356 reject_low 31 ALIGNMENT 77 YS2-7j11.p1k chr03 176 476 149513 149807 F 301 79.07 1356 reject_low 34 ALIGNMENT 0 YS2-7j11.p1k chr07 928 456 817419 817418 C 473 0.00 1356 reject_low 35 ALIGNMENT 0 YS2-7j11.p1k chr12 62 142 941189 941188 F 81 0.00 1356 reject_low 18 ALIGNMENT 0 YS2-7j11.p1k chr09 62 142 246217 246216 F 81 0.00 1356 reject_low 7 ALIGNMENT 0 YS2-7j11.p1k chr03 62 142 90437 90436 F 81 0.00 1356 reject_low 16 ALIGNMENT 309 YS2-7j11.p1k chr13 481 136 168343 168688 C 346 98.84 1356 reject_low 3 ALIGNMENT 299 YS2-7j11.p1k chr08 472 143 91766 92095 C 330 99.09 1356 reject_low 15 ALIGNMENT 0 YS2-7j11.p1k chr10 62 142 538017 538016 F 81 0.00 1356 reject_low 24 ALIGNMENT 305 YS2-7j11.p1k chr05 475 143 431486 431818 C 333 99.40 1356 reject_low 10 ALIGNMENT 0 YS2-7j11.p1k chr14 142 62 726947 726946 C 81 0.00 1356 reject_low 17 ALIGNMENT 0 YS2-7j11.p1k chr03 141 62 124464 124463 C 80 0.00 1356 reject_low 33 ALIGNMENT 289 YS2-7j11.p1k chr04 465 143 513695 514016 C 323 99.07 1356 reject_low 20 ALIGNMENT 0 YS2-7j11.p1k chr15 477 928 665147 665146 F 452 0.00 1356 reject_low 8 ALIGNMENT 0 YS2-7j11.q1k chr14 955 62 568234 568233 C 894 0.00 1333 reject_low 1 ALIGNMENT 0 YS2-7j11.p1k chr12 476 928 947147 947146 F 453 0.00 1356 reject_low 19 ALIGNMENT 0 YS2-7j11.p1k chr04 142 62 513587 513586 C 81 0.00 1356 reject_low 40 ALIGNMENT 0 YS2-7j11.p1k chr05 928 476 431487 431486 C 453 0.00 1356 reject_low 10 ALIGNMENT 79 YS2-7j11.q1k chr06 1070 971 101371 101472 C 100 94.00 1333 reject_low 22 ALIGNMENT 0 YS2-7j11.p1k chr14 779 928 547212 547211 F 150 0.00 1356 reject_low 2 ALIGNMENT 0 YS2-7j11.q1k chr15 970 62 464553 464552 C 909 0.00 1333 reject_low 11 ALIGNMENT 0 YS2-7j11.p1k chr14 198 62 561607 561606 C 137 0.00 1356 reject_low 41 ALIGNMENT 0 YS2-7j11.p1k chr07 466 928 811773 811772 F 463 0.00 1356 reject_low 26 ALIGNMENT 111 YS2-7j11.p1k chr14 660 778 568116 568233 F 119 98.32 1356 reject_low 1 ALIGNMENT 308 YS2-7j11.p1k chr09 143 475 246217 246549 F 333 99.70 1356 reject_low 7 ALIGNMENT 0 YS2-7j11.q1k chr13 62 970 196068 196067 F 909 0.00 1333 reject_low 23 ALIGNMENT 0 YS2-7j11.p1k chr14 928 466 562045 562044 C 463 0.00 1356 reject_low 30 ALIGNMENT 0 YS2-7j11.p1k chr05 477 928 62475 62474 F 452 0.00 1356 reject_low 5 ALIGNMENT 0 YS2-7j11.p1k chr14 62 659 568116 568115 F 598 0.00 1356 reject_low 1 ALIGNMENT 0 YS2-7j11.p1k chr07 341 62 817533 817532 C 280 0.00 1356 reject_low 35 ALIGNMENT 0 YS2-7j11.p1k chr14 62 142 519164 519163 F 81 0.00 1356 reject_low 31 ALIGNMENT 306 YS2-7j11.p1k chr15 143 476 664814 665147 F 334 99.40 1356 reject_low 8 ALIGNMENT 295 YS2-7j11.p1k chr10 476 143 203703 204035 C 334 98.50 1356 reject_low 14 ALIGNMENT 0 YS2-7j12.p1k chr07 290 179 287353 287352 C 112 0.00 290 reject_low 6 ALIGNMENT 41 YS2-7j12.q1k chr13 30 82 379205 379255 F 53 96.23 111 accept_chi 1 ALIGNMENT 226 YS2-7j12.p1k chr13 271 29 379205 379447 C 243 98.35 290 accept_chi 0 ALIGNMENT 107 YS2-7j12.p1k chr11 73 189 302567 302683 F 117 97.44 290 reject_low 4 ALIGNMENT 106 YS2-7j12.p1k chr07 186 73 878703 878816 C 114 98.25 290 reject_low 5 ALIGNMENT 0 YS2-7j12.p1k chr16 290 186 56159 56158 C 105 0.00 290 reject_low 3 ALIGNMENT 0 YS2-7j12.p1k chr11 190 290 302683 302682 F 101 0.00 290 reject_low 4 ALIGNMENT 0 YS2-7j12.p1k chr13 290 272 379206 379205 C 19 0.00 290 accept_chi 0 ALIGNMENT 102 YS2-7j12.p1k chr07 178 73 287352 287457 C 106 99.06 290 reject_low 6 ALIGNMENT 116 YS2-7j12.p1k chr10 185 58 415835 415962 C 128 97.66 290 reject_low 2 ALIGNMENT 110 YS2-7j12.p1k chr16 185 58 56158 56285 C 128 96.09 290 reject_low 3 ALIGNMENT 0 YS2-7j12.p1k chr07 290 187 878704 878703 C 104 0.00 290 reject_low 5 ALIGNMENT 0 YS2-7j12.p1k chr10 290 186 415836 415835 C 105 0.00 290 reject_low 2 ALIGNMENT 0 YS2-7j13.q1k vc_5 186 62 37 36 C 125 0.00 225 reject_low 7 ALIGNMENT 36 YS2-7j13.q1k vc_5 222 187 1 36 C 36 100.00 225 reject_low 7 ALIGNMENT 0 YS2-7j13.q1k vc_5 186 62 5064 5063 C 125 0.00 225 reject_low 5 ALIGNMENT 41 YS2-7j13.q1k vc_3 225 185 2472 2512 C 41 100.00 225 reject_low 3 ALIGNMENT 41 YS2-7j13.q1k vc_2 225 185 2105 2145 C 41 100.00 225 reject_low 2 ALIGNMENT 132 YS2-7j13.q1k chr04 40 185 638529 638673 F 146 99.32 225 accept 0 ALIGNMENT 39 YS2-7j13.q1k vc_5 225 187 5025 5063 C 39 100.00 225 reject_low 5 ALIGNMENT 0 YS2-7j13.q1k vc_4 62 184 5831 5830 F 123 0.00 225 reject_low 4 ALIGNMENT 0 YS2-7j13.q1k vc_2 184 62 2146 2145 C 123 0.00 225 reject_low 2 ALIGNMENT 0 YS2-7j13.q1k vc_7 62 187 13525 13524 F 126 0.00 225 reject_low 6 ALIGNMENT 0 YS2-7j13.q1k vc_3 184 62 2513 2512 C 123 0.00 225 reject_low 3 ALIGNMENT 0 YS2-7j13.q1k chr04 186 225 638673 638672 F 40 0.00 225 accept 0 ALIGNMENT 41 YS2-7j13.q1k vc_1 225 185 2472 2512 C 41 100.00 225 reject_low 1 ALIGNMENT 38 YS2-7j13.q1k vc_7 188 225 13525 13562 F 38 100.00 225 reject_low 6 ALIGNMENT 0 YS2-7j13.q1k vc_1 184 62 2513 2512 C 123 0.00 225 reject_low 1 ALIGNMENT 41 YS2-7j13.q1k vc_4 185 225 5831 5871 F 41 100.00 225 reject_low 4 ALIGNMENT 45 YS2-7j14.q1k chr08 31 80 338556 338606 F 50 98.00 102 accept 0 ALIGNMENT 1046 YS2-7j14.p1k chr08 1193 26 342045 343221 C 1168 97.09 1369 accept 0 ALIGNMENT 899 YS2-7j15.q1k chr11 30 1124 452650 453759 F 1095 95.53 1308 accept 0 ALIGNMENT 1026 YS2-7j15.p1k chr11 1235 30 453638 454856 C 1206 96.02 1386 accept 0 ALIGNMENT 0 YS2-7j17.q1k chrm 62 347 69486 69485 F 286 0.00 1351 reject_low 1 ALIGNMENT 221 YS2-7j17.q1k chrm 36 1194 69138 70292 F 1159 84.47 1351 accept 0 ALIGNMENT 0 YS2-7j17.q1k chrm 705 917 69844 69843 F 213 0.00 1351 reject_low 1 ALIGNMENT 196 YS2-7j17.q1k chrm 348 704 69486 69844 F 357 98.32 1351 reject_low 1 ALIGNMENT 937 YS2-7j18.p1k chr16 128 1247 86863 87979 F 1120 95.71 1394 accept 0 ALIGNMENT 44 YS2-7j18.q1k chr16 75 28 92038 92086 C 48 97.92 103 accept 0 ALIGNMENT 1007 YS2-7j19.q1k chr02 37 1203 472237 473407 F 1167 96.40 1349 accept 0 ALIGNMENT 0 YS2-7j19.p1k chr16 875 262 700593 700592 C 614 0.00 1361 reject_low 1 ALIGNMENT 788 YS2-7j19.p1k chr02 1168 181 476738 477744 C 988 94.64 1361 accept 0 ALIGNMENT 60 YS2-7j19.p1k chr16 261 181 700592 700671 C 81 92.59 1361 reject_low 1 ALIGNMENT 550 YS2-7j21.p1k chr14 1121 409 499896 500627 C 713 94.11 1261 accept 0 ALIGNMENT 315 YS2-7j21.p1k chr16 407 32 276400 276776 C 376 98.67 1261 reject_low 1 ALIGNMENT 0 YS2-7j21.p1k chr16 884 408 276401 276400 C 477 0.00 1261 reject_low 1 ALIGNMENT 0 YS2-7j21.p1k chr14 408 62 500628 500627 C 347 0.00 1261 accept 0 ALIGNMENT 960 YS2-7j21.q1k chr14 39 1165 498267 499409 F 1127 96.45 1264 accept 0 ALIGNMENT 970 YS2-7j22.p1k chr11 33 1180 351807 352971 F 1148 95.56 1302 accept 0 ALIGNMENT 0 YS2-7j23.q1k vc_7 62 336 13525 13524 F 275 0.00 374 reject_low 7 ALIGNMENT 0 YS2-7j23.q1k chr07 334 374 1009737 1009736 F 41 0.00 374 accept_chi 0 ALIGNMENT 0 YS2-7j23.q1k vc_5 335 62 37 36 C 274 0.00 374 reject_low 8 ALIGNMENT 36 YS2-7j23.q1k vc_5 371 336 1 36 C 36 100.00 374 reject_low 8 ALIGNMENT 0 YS2-7j23.p1k chr07 340 322 1009445 1009444 C 19 0.00 340 accept_chi 1 ALIGNMENT 41 YS2-7j23.q1k vc_4 334 374 5831 5871 F 41 100.00 374 reject_low 5 ALIGNMENT 38 YS2-7j23.q1k vc_7 337 374 13525 13562 F 38 100.00 374 reject_low 7 ALIGNMENT 0 YS2-7j23.q1k vc_3 333 62 2513 2512 C 272 0.00 374 reject_low 4 ALIGNMENT 41 YS2-7j23.q1k vc_2 374 334 2105 2145 C 41 100.00 374 reject_low 3 ALIGNMENT 127 YS2-7j23.p1k chr07 321 180 1009444 1009585 C 142 97.18 340 accept_chi 1 ALIGNMENT 281 YS2-7j23.q1k chr07 40 333 1009444 1009737 F 294 98.98 374 accept_chi 0 ALIGNMENT 0 YS2-7j23.q1k vc_1 333 62 2513 2512 C 272 0.00 374 reject_low 2 ALIGNMENT 0 YS2-7j23.q1k vc_5 335 62 5064 5063 C 274 0.00 374 reject_low 6 ALIGNMENT 0 YS2-7j23.q1k vc_2 333 62 2146 2145 C 272 0.00 374 reject_low 3 ALIGNMENT 0 YS2-7j23.q1k vc_4 62 333 5831 5830 F 272 0.00 374 reject_low 5 ALIGNMENT 41 YS2-7j23.q1k vc_3 374 334 2472 2512 C 41 100.00 374 reject_low 4 ALIGNMENT 39 YS2-7j23.q1k vc_5 374 336 5025 5063 C 39 100.00 374 reject_low 6 ALIGNMENT 41 YS2-7j23.q1k vc_1 374 334 2472 2512 C 41 100.00 374 reject_low 2 ALIGNMENT 998 YS2-7j24.p1k chr16 1187 62 185921 187052 C 1126 97.16 1337 accept 0 ALIGNMENT 41 YS2-7k01.q1k vc_1 331 291 2472 2512 C 41 100.00 331 reject_low 2 ALIGNMENT 38 YS2-7k01.q1k vc_7 294 331 13525 13562 F 38 100.00 331 reject_low 6 ALIGNMENT 39 YS2-7k01.q1k vc_5 331 293 5025 5063 C 39 100.00 331 reject_low 5 ALIGNMENT 41 YS2-7k01.q1k vc_4 291 331 5831 5871 F 41 100.00 331 reject_low 4 ALIGNMENT 0 YS2-7k01.q1k vc_1 290 62 2513 2512 C 229 0.00 331 reject_low 2 ALIGNMENT 0 YS2-7k01.q1k vc_4 62 290 5831 5830 F 229 0.00 331 reject_low 4 ALIGNMENT 251 YS2-7k01.q1k chr10 30 290 253239 253500 F 261 99.62 331 accept_chi 1 ALIGNMENT 0 YS2-7k01.q1k vc_5 292 62 5064 5063 C 231 0.00 331 reject_low 5 ALIGNMENT 0 YS2-7k01.q1k chr10 291 331 253500 253499 F 41 0.00 331 accept_chi 1 ALIGNMENT 0 YS2-7k01.q1k vc_5 292 62 37 36 C 231 0.00 331 reject_low 7 ALIGNMENT 0 YS2-7k01.q1k vc_7 62 293 13525 13524 F 232 0.00 331 reject_low 6 ALIGNMENT 41 YS2-7k01.q1k vc_3 331 291 2472 2512 C 41 100.00 331 reject_low 3 ALIGNMENT 0 YS2-7k01.p1k chr10 311 293 253240 253239 C 19 0.00 311 accept_chi 0 ALIGNMENT 253 YS2-7k01.p1k chr10 292 31 253239 253500 C 262 99.62 311 accept_chi 0 ALIGNMENT 36 YS2-7k01.q1k vc_5 328 293 1 36 C 36 100.00 331 reject_low 7 ALIGNMENT 0 YS2-7k01.q1k vc_3 290 62 2513 2512 C 229 0.00 331 reject_low 3 ALIGNMENT 36 YS2-7k02.q1k vc_5 324 289 1 36 C 36 100.00 327 reject_low 8 ALIGNMENT 41 YS2-7k02.q1k vc_3 327 287 2472 2512 C 41 100.00 327 reject_low 4 ALIGNMENT 41 YS2-7k02.q1k vc_2 327 287 2105 2145 C 41 100.00 327 reject_low 3 ALIGNMENT 236 YS2-7k02.q1k chr04 40 286 1171770 1172016 F 247 100.00 327 accept_chi 0 ALIGNMENT 0 YS2-7k02.q1k vc_3 286 62 2513 2512 C 225 0.00 327 reject_low 4 ALIGNMENT 38 YS2-7k02.q1k vc_7 290 327 13525 13562 F 38 100.00 327 reject_low 7 ALIGNMENT 0 YS2-7k02.q1k vc_5 288 62 37 36 C 227 0.00 327 reject_low 8 ALIGNMENT 0 YS2-7k02.p1k chr04 289 271 1171771 1171770 C 19 0.00 289 accept_chi 1 ALIGNMENT 0 YS2-7k02.q1k vc_4 62 286 5831 5830 F 225 0.00 327 reject_low 5 ALIGNMENT 0 YS2-7k02.q1k vc_1 286 62 2513 2512 C 225 0.00 327 reject_low 2 ALIGNMENT 39 YS2-7k02.q1k vc_5 327 289 5025 5063 C 39 100.00 327 reject_low 6 ALIGNMENT 41 YS2-7k02.q1k vc_1 327 287 2472 2512 C 41 100.00 327 reject_low 2 ALIGNMENT 41 YS2-7k02.q1k vc_4 287 327 5831 5871 F 41 100.00 327 reject_low 5 ALIGNMENT 0 YS2-7k02.q1k chr04 287 327 1172016 1172015 F 41 0.00 327 accept_chi 0 ALIGNMENT 0 YS2-7k02.q1k vc_2 286 62 2146 2145 C 225 0.00 327 reject_low 3 ALIGNMENT 221 YS2-7k02.p1k chr04 270 25 1171770 1172016 C 246 97.97 289 accept_chi 1 ALIGNMENT 0 YS2-7k02.q1k vc_7 62 289 13525 13524 F 228 0.00 327 reject_low 7 ALIGNMENT 0 YS2-7k02.q1k vc_5 288 62 5064 5063 C 227 0.00 327 reject_low 6 ALIGNMENT 926 YS2-7k03.q1k chr14 40 1113 404499 405595 F 1074 96.93 1288 accept 0 ALIGNMENT 1026 YS2-7k03.p1k chr14 1251 36 408692 409908 C 1216 95.48 1323 accept 0 ALIGNMENT 977 YS2-7k04.q1k chr04 1211 41 460386 461573 C 1171 95.22 1337 accept 0 ALIGNMENT 959 YS2-7k04.p1k chr04 33 1114 456887 457971 F 1082 97.23 1356 accept 0 ALIGNMENT 0 YS2-7k05.q1k vc_5 202 62 5064 5063 C 141 0.00 241 reject_low 6 ALIGNMENT 0 YS2-7k05.q1k vc_2 200 62 2146 2145 C 139 0.00 241 reject_low 3 ALIGNMENT 121 YS2-7k05.q1k chrm 201 38 44251 44415 C 164 99.39 241 accept_chi 0 ALIGNMENT 0 YS2-7k05.p1k chrm 227 244 44415 44414 F 18 0.00 244 accept_chi 1 ALIGNMENT 0 YS2-7k05.q1k vc_5 202 62 37 36 C 141 0.00 241 reject_low 8 ALIGNMENT 0 YS2-7k05.q1k vc_1 200 62 2513 2512 C 139 0.00 241 reject_low 2 ALIGNMENT 36 YS2-7k05.q1k vc_5 238 203 1 36 C 36 100.00 241 reject_low 8 ALIGNMENT 38 YS2-7k05.q1k vc_7 204 241 13525 13562 F 38 100.00 241 reject_low 7 ALIGNMENT 0 YS2-7k05.q1k vc_4 62 200 5831 5830 F 139 0.00 241 reject_low 5 ALIGNMENT 41 YS2-7k05.q1k vc_4 201 241 5831 5871 F 41 100.00 241 reject_low 5 ALIGNMENT 0 YS2-7k05.q1k chrm 241 202 44252 44251 C 40 0.00 241 accept_chi 0 ALIGNMENT 0 YS2-7k05.q1k vc_3 200 62 2513 2512 C 139 0.00 241 reject_low 4 ALIGNMENT 41 YS2-7k05.q1k vc_3 241 201 2472 2512 C 41 100.00 241 reject_low 4 ALIGNMENT 115 YS2-7k05.p1k chrm 63 226 44251 44415 F 164 97.56 244 accept_chi 1 ALIGNMENT 39 YS2-7k05.q1k vc_5 241 203 5025 5063 C 39 100.00 241 reject_low 6 ALIGNMENT 0 YS2-7k05.q1k vc_7 62 203 13525 13524 F 142 0.00 241 reject_low 7 ALIGNMENT 41 YS2-7k05.q1k vc_2 241 201 2105 2145 C 41 100.00 241 reject_low 3 ALIGNMENT 41 YS2-7k05.q1k vc_1 241 201 2472 2512 C 41 100.00 241 reject_low 2 ALIGNMENT 998 YS2-7k06.p1k chr05 1213 34 399610 400795 C 1180 95.17 1397 accept 0 ALIGNMENT 932 YS2-7k06.q1k chr05 35 1071 395878 396925 F 1037 96.91 1267 accept 0 ALIGNMENT 36 YS2-7k07.q1k vc_5 608 573 1 36 C 36 100.00 611 reject_low 9 ALIGNMENT 0 YS2-7k07.q1k vc_5 572 62 37 36 C 511 0.00 611 reject_low 9 ALIGNMENT 38 YS2-7k07.q1k vc_7 574 611 13525 13562 F 38 100.00 611 reject_low 8 ALIGNMENT 497 YS2-7k07.p1k chr10 559 30 272832 273362 C 530 99.06 578 accept_chi 1 ALIGNMENT 41 YS2-7k07.q1k vc_2 611 571 2105 2145 C 41 100.00 611 reject_low 3 ALIGNMENT 38 YS2-7k07.q1k vc_7 574 611 63 100 F 38 100.00 611 reject_low 7 ALIGNMENT 0 YS2-7k07.q1k vc_1 570 62 2513 2512 C 509 0.00 611 reject_low 2 ALIGNMENT 0 YS2-7k07.q1k vc_7 62 573 13525 13524 F 512 0.00 611 reject_low 8 ALIGNMENT 503 YS2-7k07.q1k chr10 41 570 272832 273362 F 530 99.43 611 accept_chi 0 ALIGNMENT 0 YS2-7k07.q1k chr10 571 611 273362 273361 F 41 0.00 611 accept_chi 0 ALIGNMENT 0 YS2-7k07.p1k chr10 578 560 272833 272832 C 19 0.00 578 accept_chi 1 ALIGNMENT 0 YS2-7k07.q1k vc_2 570 62 2146 2145 C 509 0.00 611 reject_low 3 ALIGNMENT 0 YS2-7k07.q1k vc_4 62 570 5831 5830 F 509 0.00 611 reject_low 5 ALIGNMENT 0 YS2-7k07.q1k vc_5 572 62 5064 5063 C 511 0.00 611 reject_low 6 ALIGNMENT 41 YS2-7k07.q1k vc_3 611 571 2472 2512 C 41 100.00 611 reject_low 4 ALIGNMENT 0 YS2-7k07.q1k vc_3 570 62 2513 2512 C 509 0.00 611 reject_low 4 ALIGNMENT 0 YS2-7k07.q1k vc_7 62 573 63 62 F 512 0.00 611 reject_low 7 ALIGNMENT 41 YS2-7k07.q1k vc_1 611 571 2472 2512 C 41 100.00 611 reject_low 2 ALIGNMENT 41 YS2-7k07.q1k vc_4 571 611 5831 5871 F 41 100.00 611 reject_low 5 ALIGNMENT 39 YS2-7k07.q1k vc_5 611 573 5025 5063 C 39 100.00 611 reject_low 6 ALIGNMENT 924 YS2-7k08.p1k chr04 1045 33 1222089 1223103 C 1013 98.12 1323 accept 0 ALIGNMENT 899 YS2-7k08.q1k chr04 38 1093 1219091 1220160 F 1056 96.12 1333 accept 0 ALIGNMENT 0 YS2-7k09.q1k vc_7 62 234 63 62 F 173 0.00 272 reject_low 8 ALIGNMENT 0 YS2-7k09.q1k vc_5 233 62 5064 5063 C 172 0.00 272 reject_low 7 ALIGNMENT 0 YS2-7k09.q1k vc_7 62 234 13525 13524 F 173 0.00 272 reject_low 9 ALIGNMENT 0 YS2-7k09.q1k chr12 207 272 458619 458618 F 66 0.00 272 reject_bad_break 0 ALIGNMENT 38 YS2-7k09.q1k vc_7 235 272 63 100 F 38 100.00 272 reject_low 8 ALIGNMENT 160 YS2-7k09.p1k chr12 232 53 467577 467756 C 180 98.89 249 reject_bad_break 1 ALIGNMENT 0 YS2-7k09.q1k chr12 207 272 467756 467755 F 66 0.00 272 reject_bad_break 1 ALIGNMENT 20 YS2-7k09.q1k chr12 211 231 467750 467770 F 21 100.00 272 reject_low 3 ALIGNMENT 20 YS2-7k09.p1k chr12 49 29 467750 467770 C 21 100.00 249 reject_bad_break 1 reject_low 2 ALIGNMENT 0 YS2-7k09.q1k vc_1 231 62 2513 2512 C 170 0.00 272 reject_low 4 ALIGNMENT 0 YS2-7k09.p1k chr12 249 233 458441 458440 C 17 0.00 249 reject_bad_break 0 ALIGNMENT 0 YS2-7k09.q1k vc_4 62 231 5831 5830 F 170 0.00 272 reject_low 6 ALIGNMENT 20 YS2-7k09.p1k chr12 49 29 458613 458633 C 21 100.00 249 reject_bad_break 0 ALIGNMENT 0 YS2-7k09.q1k chr12 232 272 467770 467769 F 41 0.00 272 reject_low 3 ALIGNMENT 160 YS2-7k09.q1k chr12 27 206 458439 458619 F 180 99.44 272 reject_bad_break 0 ALIGNMENT 0 YS2-7k09.q1k vc_3 231 62 2513 2512 C 170 0.00 272 reject_low 5 ALIGNMENT 160 YS2-7k09.p1k chr12 232 53 458440 458619 C 180 98.89 249 reject_bad_break 0 ALIGNMENT 0 YS2-7k09.q1k vc_5 233 62 37 36 C 172 0.00 272 reject_low 10 ALIGNMENT 41 YS2-7k09.q1k vc_4 232 272 5831 5871 F 41 100.00 272 reject_low 6 ALIGNMENT 41 YS2-7k09.q1k vc_1 272 232 2472 2512 C 41 100.00 272 reject_low 4 ALIGNMENT 36 YS2-7k09.q1k vc_5 269 234 1 36 C 36 100.00 272 reject_low 10 ALIGNMENT 0 YS2-7k09.q1k chr12 232 272 458633 458632 F 41 0.00 272 reject_low 2 ALIGNMENT 160 YS2-7k09.q1k chr12 27 206 467576 467756 F 180 99.44 272 reject_bad_break 1 ALIGNMENT 20 YS2-7k09.q1k chr12 211 231 458613 458633 F 21 100.00 272 reject_low 2 ALIGNMENT 41 YS2-7k09.q1k vc_3 272 232 2472 2512 C 41 100.00 272 reject_low 5 ALIGNMENT 39 YS2-7k09.q1k vc_5 272 234 5025 5063 C 39 100.00 272 reject_low 7 ALIGNMENT 0 YS2-7k09.q1k chr12 62 210 467750 467749 F 149 0.00 272 reject_low 3 ALIGNMENT 0 YS2-7k09.q1k chr12 62 210 458613 458612 F 149 0.00 272 reject_low 2 ALIGNMENT 0 YS2-7k09.p1k chr12 249 50 467751 467750 C 200 0.00 249 reject_low 2 ALIGNMENT 0 YS2-7k09.p1k chr12 249 233 467578 467577 C 17 0.00 249 reject_bad_break 1 ALIGNMENT 38 YS2-7k09.q1k vc_7 235 272 13525 13562 F 38 100.00 272 reject_low 9 ALIGNMENT 0 YS2-7k09.p1k chr12 52 50 467757 467749 C 3 0.00 249 reject_bad_break 1 ALIGNMENT 0 YS2-7k09.p1k chr12 52 50 458620 458612 C 3 0.00 249 reject_bad_break 0 ALIGNMENT 879 YS2-7k10.p1k chr02 1118 30 763247 764329 C 1089 95.04 1403 accept 0 ALIGNMENT 955 YS2-7k10.q1k chr02 29 1148 758816 759953 F 1120 95.80 1328 accept 0 ALIGNMENT 743 YS2-7k13.p1k chr07 31 1141 11504 12606 F 1111 90.91 1306 accept 0 ALIGNMENT 959 YS2-7k13.q1k chr07 1093 38 13733 14803 C 1056 97.54 1288 accept 0 ALIGNMENT 148 YS2-7k13.p1k chr15 264 31 1069610 1069843 C 234 88.46 1306 reject_low 1 ALIGNMENT 0 YS2-7k13.p1k chr15 882 265 1069611 1069610 C 618 0.00 1306 reject_low 1 ALIGNMENT 989 YS2-7k15.q1k chr13 31 1191 12856 14028 F 1161 96.73 1322 accept 0 ALIGNMENT 1036 YS2-7k15.p1k chr13 1307 62 17602 18865 C 1246 95.43 1362 accept 0 ALIGNMENT 1046 YS2-7k16.q1k chr09 40 1256 377792 379000 F 1217 96.14 1387 accept 0 ALIGNMENT 1053 YS2-7k16.p1k chr09 1215 28 380934 382120 C 1188 96.72 1378 accept 0 ALIGNMENT 976 YS2-7k17.p1k chr14 58 1148 634662 635769 F 1091 97.80 1317 accept 0 ALIGNMENT 959 YS2-7k17.q1k chr14 1139 43 637923 639030 C 1097 96.99 1282 accept 0 ALIGNMENT 736 YS2-7k18.q1k chr15 1166 37 1073922 1075041 C 1130 89.47 1313 accept 0 ALIGNMENT 1009 YS2-7k18.q1k chr16 37 1192 16033 17191 F 1156 96.45 1313 reject_low 1 ALIGNMENT 155 YS2-7k18.p1k chr07 216 30 10315 10501 C 187 95.19 1338 reject_low 2 ALIGNMENT 944 YS2-7k18.p1k chr15 30 1124 1070846 1071956 F 1095 96.80 1338 accept 0 ALIGNMENT 0 YS2-7k18.p1k chr07 830 217 10316 10315 C 614 0.00 1338 reject_low 2 ALIGNMENT 0 YS2-7k18.p1k chr16 473 62 19579 19578 C 412 0.00 1338 reject_low 1 ALIGNMENT 402 YS2-7k18.p1k chr16 1124 474 18912 19578 C 651 89.09 1338 reject_low 1 ALIGNMENT 0 YS2-7k19.q1k chr15 62 453 975968 975967 F 392 0.00 1333 reject_low 12 ALIGNMENT 38 YS2-7k19.q1k chr07 545 454 562030 562121 C 92 82.61 1333 reject_low 8 ALIGNMENT 0 YS2-7k19.q1k chr15 62 488 354772 354771 F 427 0.00 1333 reject_low 15 ALIGNMENT 0 YS2-7k19.q1k chr07 859 546 111360 111359 C 314 0.00 1333 reject_low 14 ALIGNMENT 0 YS2-7k19.q1k chr05 453 62 443671 443670 C 392 0.00 1333 reject_low 7 ALIGNMENT 38 YS2-7k19.q1k chr08 545 454 389362 389453 C 92 82.61 1333 reject_low 9 ALIGNMENT 0 YS2-7k19.q1k chr08 453 62 389454 389453 C 392 0.00 1333 reject_low 9 ALIGNMENT 29 YS2-7k19.q1k chr15 489 546 354772 354829 F 58 86.21 1333 reject_low 15 ALIGNMENT 38 YS2-7k19.q1k chr02 454 545 9152 9243 F 92 82.61 1333 reject_low 3 ALIGNMENT 0 YS2-7k19.q1k chr04 453 62 878573 878572 C 392 0.00 1333 reject_low 5 ALIGNMENT 796 YS2-7k19.p1k chr16 1180 189 781412 782394 C 992 95.46 1413 accept 0 ALIGNMENT 0 YS2-7k19.p1k chr16 573 242 777563 777562 C 332 0.00 1413 reject_low 1 ALIGNMENT 0 YS2-7k19.q1k chr03 546 859 84218 84217 F 314 0.00 1333 reject_low 13 ALIGNMENT 0 YS2-7k19.q1k chr01 453 62 160517 160516 C 392 0.00 1333 reject_low 2 ALIGNMENT 35 YS2-7k19.q1k chr03 454 545 84127 84218 F 92 81.52 1333 reject_low 13 ALIGNMENT 0 YS2-7k19.q1k chr10 62 453 538076 538075 F 392 0.00 1333 reject_low 10 ALIGNMENT 0 YS2-7k19.q1k chr15 547 859 354829 354828 F 313 0.00 1333 reject_low 15 ALIGNMENT 0 YS2-7k19.q1k chr03 859 546 168779 168778 C 314 0.00 1333 reject_low 4 ALIGNMENT 977 YS2-7k19.q1k chr16 35 1251 777468 778683 F 1217 94.58 1333 accept 0 ALIGNMENT 0 YS2-7k19.q1k chr03 453 62 168870 168869 C 392 0.00 1333 reject_low 4 ALIGNMENT 38 YS2-7k19.q1k chr04 454 545 981224 981315 F 92 82.61 1333 reject_low 6 ALIGNMENT 0 YS2-7k19.q1k chr15 546 859 976059 976058 F 314 0.00 1333 reject_low 12 ALIGNMENT 0 YS2-7k19.q1k chr05 859 546 443580 443579 C 314 0.00 1333 reject_low 7 ALIGNMENT 0 YS2-7k19.q1k chr01 859 546 160426 160425 C 314 0.00 1333 reject_low 2 ALIGNMENT 0 YS2-7k19.q1k chr07 478 62 111426 111425 C 417 0.00 1333 reject_low 14 ALIGNMENT 0 YS2-7k19.q1k chr02 62 453 9152 9151 F 392 0.00 1333 reject_low 3 ALIGNMENT 38 YS2-7k19.q1k chr15 454 545 975968 976059 F 92 82.61 1333 reject_low 12 ALIGNMENT 38 YS2-7k19.q1k chr01 545 454 160425 160516 C 92 82.61 1333 reject_low 2 ALIGNMENT 0 YS2-7k19.q1k chr10 546 859 538167 538166 F 314 0.00 1333 reject_low 10 ALIGNMENT 0 YS2-7k19.q1k chr04 859 546 878482 878481 C 314 0.00 1333 reject_low 5 ALIGNMENT 35 YS2-7k19.q1k chr07 545 479 111359 111425 C 67 86.57 1333 reject_low 14 ALIGNMENT 0 YS2-7k19.q1k chr07 453 62 562122 562121 C 392 0.00 1333 reject_low 8 ALIGNMENT 0 YS2-7k19.q1k chr08 859 546 389363 389362 C 314 0.00 1333 reject_low 9 ALIGNMENT 38 YS2-7k19.q1k chr05 545 454 443579 443670 C 92 82.61 1333 reject_low 7 ALIGNMENT 38 YS2-7k19.q1k chr03 545 454 168778 168869 C 92 82.61 1333 reject_low 4 ALIGNMENT 38 YS2-7k19.q1k chr04 545 454 878481 878572 C 92 82.61 1333 reject_low 5 ALIGNMENT 0 YS2-7k19.q1k chr03 62 453 84127 84126 F 392 0.00 1333 reject_low 13 ALIGNMENT 0 YS2-7k19.q1k chr04 546 859 981315 981314 F 314 0.00 1333 reject_low 6 ALIGNMENT 179 YS2-7k19.p1k chr16 1029 574 777124 777562 C 456 83.77 1413 reject_low 1 ALIGNMENT 0 YS2-7k19.q1k chr14 62 453 519223 519222 F 392 0.00 1333 reject_low 11 ALIGNMENT 0 YS2-7k19.q1k chr02 546 859 9243 9242 F 314 0.00 1333 reject_low 3 ALIGNMENT 38 YS2-7k19.q1k chr10 454 545 538076 538167 F 92 82.61 1333 reject_low 10 ALIGNMENT 38 YS2-7k19.q1k chr14 454 545 519223 519314 F 92 82.61 1333 reject_low 11 ALIGNMENT 0 YS2-7k19.q1k chr14 546 859 519314 519313 F 314 0.00 1333 reject_low 11 ALIGNMENT 0 YS2-7k19.q1k chr04 62 453 981224 981223 F 392 0.00 1333 reject_low 6 ALIGNMENT 0 YS2-7k19.q1k chr07 859 546 562031 562030 C 314 0.00 1333 reject_low 8 ALIGNMENT 955 YS2-7k20.p1k chr05 1203 35 532260 533431 C 1169 94.78 1363 accept 0 ALIGNMENT 996 YS2-7k20.q1k chr05 30 1205 529178 530367 F 1176 95.75 1301 accept 0 ALIGNMENT 125 YS2-7k22.p1k chr16 227 56 943142 943308 C 172 93.60 246 reject_low 29 ALIGNMENT 42 YS2-7k22.q1k vc_1 250 209 2472 2513 C 42 100.00 250 reject_low 16 ALIGNMENT 164 YS2-7k22.q1k chr02 209 38 5069 5240 C 172 100.00 250 reject_low 8 ALIGNMENT 131 YS2-7k22.q1k chr07 38 209 1084984 1085150 F 172 94.77 250 reject_low 26 ALIGNMENT 20 YS2-7k22.p1k chr12 227 207 1065751 1065771 C 21 100.00 246 reject_low 36 ALIGNMENT 137 YS2-7k22.q1k chr10 209 38 6190 6356 C 172 95.93 250 reject_low 21 ALIGNMENT 20 YS2-7k22.p1k chr05 207 227 5895 5915 F 21 100.00 246 reject_low 33 ALIGNMENT 20 YS2-7k22.q1k chr05 58 38 5895 5915 C 21 100.00 250 reject_low 34 ALIGNMENT 0 YS2-7k22.q1k chr05 250 210 5774 5773 C 41 0.00 250 reject_low 34 ALIGNMENT 20 YS2-7k22.p1k chr05 227 207 570948 570968 C 21 100.00 246 reject_low 35 ALIGNMENT 0 YS2-7k22.p1k chr05 228 246 5915 5914 F 19 0.00 246 reject_low 33 ALIGNMENT 0 YS2-7k22.q1k chr12 250 210 10404 10403 C 41 0.00 250 accept_tel 0 ALIGNMENT 131 YS2-7k22.p1k chr07 227 56 1084984 1085150 C 172 94.77 246 reject_low 23 ALIGNMENT 164 YS2-7k22.q1k chr12 209 38 10403 10574 C 172 100.00 250 accept_tel 0 ALIGNMENT 164 YS2-7k22.p1k chr12 227 56 1072274 1072445 C 172 100.00 246 reject_low 22 ALIGNMENT 0 YS2-7k22.q1k chr16 250 210 5728 5727 C 41 0.00 250 reject_low 28 ALIGNMENT 164 YS2-7k22.q1k chr12 209 38 4868 5039 C 172 100.00 250 reject_low 12 ALIGNMENT 0 YS2-7k22.q1k chr14 250 210 5819 5818 C 41 0.00 250 reject_low 27 ALIGNMENT 0 YS2-7k22.p1k chr09 228 246 6373 6372 F 19 0.00 246 reject_low 18 ALIGNMENT 0 YS2-7k22.q1k chr05 210 250 571090 571089 F 41 0.00 250 reject_low 37 ALIGNMENT 0 YS2-7k22.q1k chr12 210 250 1065893 1065892 F 41 0.00 250 reject_low 22 ALIGNMENT 0 YS2-7k22.q1k chr12 59 95 1065772 1065784 F 37 0.00 250 reject_low 22 ALIGNMENT 20 YS2-7k22.q1k chr05 38 58 570948 570968 F 21 100.00 250 reject_low 37 ALIGNMENT 0 YS2-7k22.p1k chr16 228 246 5893 5892 F 19 0.00 246 reject_low 25 ALIGNMENT 0 YS2-7k22.q1k chr04 210 250 1526244 1526243 F 41 0.00 250 reject_low 9 ALIGNMENT 164 YS2-7k22.p1k chr04 227 56 1526073 1526244 C 172 100.00 246 reject_low 2 ALIGNMENT 0 YS2-7k22.p1k chr10 228 246 6356 6355 F 19 0.00 246 reject_low 19 ALIGNMENT 83 YS2-7k22.p1k chr12 169 56 1065785 1065893 C 114 93.86 246 reject_low 36 ALIGNMENT 83 YS2-7k22.q1k chr05 96 209 570982 571090 F 114 93.86 250 reject_low 37 ALIGNMENT 0 YS2-7k22.q1k chr02 250 210 5070 5069 C 41 0.00 250 reject_low 8 ALIGNMENT 20 YS2-7k22.q1k chr12 38 58 1065751 1065771 F 21 100.00 250|0,10 reject_low 22,32 ALIGNMENT 0 YS2-7k22.q1k chr05 95 59 5882 5894 C 37 0.00 250 reject_low 34 ALIGNMENT 164 YS2-7k22.q1k chr04 38 209 1526073 1526244 F 172 100.00 250 reject_low 9 ALIGNMENT 0 YS2-7k22.p1k chr04 246 228 1526074 1526073 C 19 0.00 246 reject_low 2 ALIGNMENT 0 YS2-7k22.q1k chr05 59 95 570969 570981 F 37 0.00 250 reject_low 37 ALIGNMENT 0 YS2-7k22.q1k chr15 210 250 1085409 1085408 F 41 0.00 250 reject_low 14 ALIGNMENT 0 YS2-7k22.q1k chr10 250 210 6191 6190 C 41 0.00 250 reject_low 21 ALIGNMENT 164 YS2-7k22.q1k chr08 38 209 557592 557763 F 172 100.00 250 reject_low 11 ALIGNMENT 86 YS2-7k22.p1k chr05 56 169 5773 5881 F 114 94.74 246 reject_low 33 ALIGNMENT 86 YS2-7k22.q1k chr05 209 96 5773 5881 C 114 94.74 250 reject_low 34 ALIGNMENT 0 YS2-7k22.p1k chr02 228 246 5240 5239 F 19 0.00 246 reject_low 1 ALIGNMENT 164 YS2-7k22.p1k chr15 227 56 1085238 1085409 C 172 100.00 246 reject_low 7 ALIGNMENT 140 YS2-7k22.p1k chr06 56 227 3906 4072 F 172 96.51 246 reject_low 15 ALIGNMENT 137 YS2-7k22.p1k chr10 56 227 6190 6356 F 172 95.93 246 reject_low 19 ALIGNMENT 131 YS2-7k22.p1k chr14 56 227 5818 5984 F 172 94.77 246 reject_low 24 ALIGNMENT 164 YS2-7k22.q1k chr08 209 38 4600 4771 C 172 100.00 250 reject_low 10 ALIGNMENT 83 YS2-7k22.q1k chr12 96 209 1065785 1065893 F 114 93.86 250 reject_low 22 ALIGNMENT 0 YS2-7k22.p1k chr12 228 246 5039 5038 F 19 0.00 246 accept_tel 0 ALIGNMENT 137 YS2-7k22.p1k chr09 56 227 6207 6373 F 172 95.93 246 reject_low 18 ALIGNMENT 0 YS2-7k22.p1k chr12 228 246 10574 10573 F 19 0.00 246 reject_low 5 ALIGNMENT 0 YS2-7k22.p1k chr05 206 170 570969 570981 C 37 0.00 246 reject_low 35 ALIGNMENT 0 YS2-7k22.q1k chr08 210 250 557763 557762 F 41 0.00 250 reject_low 11 ALIGNMENT 0 YS2-7k22.p1k chr12 246 228 1072275 1072274 C 19 0.00 246 reject_low 22 ALIGNMENT 164 YS2-7k22.p1k chr12 56 227 4868 5039 F 172 100.00 246 accept_tel 0 ALIGNMENT 131 YS2-7k22.q1k chr14 209 38 5818 5984 C 172 94.77 250 reject_low 27 ALIGNMENT 164 YS2-7k22.p1k chr12 56 227 10403 10574 F 172 100.00 246 reject_low 5 ALIGNMENT 83 YS2-7k22.p1k chr05 169 56 570982 571090 C 114 93.86 246 reject_low 35 ALIGNMENT 0 YS2-7k22.q1k chr07 210 250 1085150 1085149 F 41 0.00 250 reject_low 26 ALIGNMENT 0 YS2-7k22.p1k chr15 246 228 1085239 1085238 C 19 0.00 246 reject_low 7 ALIGNMENT 0 YS2-7k22.p1k chr08 246 228 557593 557592 C 19 0.00 246 reject_low 4 ALIGNMENT 0 YS2-7k22.p1k chr06 228 246 4072 4071 F 19 0.00 246 reject_low 15 ALIGNMENT 0 YS2-7k22.q1k chr08 250 210 4601 4600 C 41 0.00 250 reject_low 10 ALIGNMENT 0 YS2-7k22.p1k chr12 206 170 1065772 1065784 C 37 0.00 246 reject_low 36 ALIGNMENT 0 YS2-7k22.p1k chr07 246 228 1084985 1084984 C 19 0.00 246 reject_low 23 ALIGNMENT 164 YS2-7k22.q1k chr13 209 38 4744 4915 C 172 100.00 250 reject_low 13 ALIGNMENT 137 YS2-7k22.q1k chr09 209 38 6207 6373 C 172 95.93 250 reject_low 20 ALIGNMENT 0 YS2-7k22.q1k chr13 250 210 4745 4744 C 41 0.00 250 reject_low 13 ALIGNMENT 0 YS2-7k22.q1k chr12 250 210 4869 4868 C 41 0.00 250 reject_low 12 ALIGNMENT 131 YS2-7k22.p1k chr16 56 227 5727 5893 F 172 94.77 246 reject_low 25 ALIGNMENT 164 YS2-7k22.q1k chr12 38 209 1072274 1072445 F 172 100.00 250|11,0 reject_low 32 ALIGNMENT 0 YS2-7k22.p1k chr05 170 206 5882 5894 F 37 0.00 246 reject_low 33 ALIGNMENT 0 YS2-7k22.p1k chr12 246 228 1065752 1065751 C 19 0.00 246 reject_low 36 ALIGNMENT 164 YS2-7k22.p1k chr08 227 56 557592 557763 C 172 100.00 246 reject_low 4 ALIGNMENT 0 YS2-7k22.q1k vc_1 208 62 2514 2513 C 147 0.00 250 reject_low 16 ALIGNMENT 0 YS2-7k22.q1k vc_7 62 212 13525 13524 F 151 0.00 250 reject_low 31 ALIGNMENT 0 YS2-7k22.p1k chr08 228 246 4771 4770 F 19 0.00 246 reject_low 3 ALIGNMENT 140 YS2-7k22.q1k chr06 209 38 3906 4072 C 172 96.51 250 reject_low 17 ALIGNMENT 0 YS2-7k22.q1k chr16 210 250 943308 943307 F 41 0.00 250 reject_low 30 ALIGNMENT 125 YS2-7k22.q1k chr16 38 209 943142 943308 F 172 93.60 250 reject_low 30 ALIGNMENT 164 YS2-7k22.q1k chr15 38 209 1085238 1085409 F 172 100.00 250 reject_low 14 ALIGNMENT 0 YS2-7k22.p1k chr16 246 228 943143 943142 C 19 0.00 246 reject_low 29 ALIGNMENT 0 YS2-7k22.p1k chr05 246 228 570949 570948 C 19 0.00 246 reject_low 35 ALIGNMENT 164 YS2-7k22.p1k chr08 56 227 4600 4771 F 172 100.00 246 reject_low 3 ALIGNMENT 164 YS2-7k22.p1k chr02 56 227 5069 5240 F 172 100.00 246 reject_low 1 ALIGNMENT 164 YS2-7k22.p1k chr13 56 227 4744 4915 F 172 100.00 246 reject_low 6 ALIGNMENT 0 YS2-7k22.p1k chr13 228 246 4915 4914 F 19 0.00 246 reject_low 6 ALIGNMENT 131 YS2-7k22.q1k chr16 209 38 5727 5893 C 172 94.77 250 reject_low 28 ALIGNMENT 0 YS2-7k22.q1k chr12 210 250 1072445 1072444 F 41 0.00 250 reject_low 32 ALIGNMENT 0 YS2-7k22.q1k chr09 250 210 6208 6207 C 41 0.00 250 reject_low 20 ALIGNMENT 0 YS2-7k22.p1k chr14 228 246 5984 5983 F 19 0.00 246 reject_low 24 ALIGNMENT 0 YS2-7k22.q1k chr06 250 210 3907 3906 C 41 0.00 250 reject_low 17 ALIGNMENT 38 YS2-7k22.q1k vc_7 213 250 13525 13562 F 38 100.00 250 reject_low 31 ALIGNMENT 0 YS2-7k22.q1k chr12 49 48 1065762 1072284 F 0 0.00 250 reject_low 32 ALIGNMENT 1081 YS2-7k23.q1k chr12 38 1238 452147 453350 F 1201 96.84 1241 accept 0 ALIGNMENT 980 YS2-7k23.p1k chr12 1237 32 455676 456877 C 1206 94.86 1253 accept 0 ALIGNMENT 0 YS2-7k23.q1k chr12 467 856 490543 490542 F 390 0.00 1241 reject_low 2 ALIGNMENT 980 YS2-7k23.p1k chr12 1237 32 464813 466014 C 1206 94.86 1253 accept 1 ALIGNMENT 421 YS2-7k23.q1k chr12 38 466 490115 490543 F 429 99.53 1241 reject_low 2 ALIGNMENT 1081 YS2-7k23.q1k chr12 38 1238 461284 462487 F 1201 96.84 1241 accept 1 ALIGNMENT 120 YS2-7k24.p1k vc_7 507 837 100 428 F 331 79.76 1372 reject_low 5 ALIGNMENT 120 YS2-7k24.p1k vc_7 507 837 13562 13890 F 331 79.76 1372 reject_low 6 ALIGNMENT 0 YS2-7k24.p1k vc_7 212 506 13562 13561 F 295 0.00 1372 reject_low 6 ALIGNMENT 0 YS2-7k24.p1k vc_4 212 506 5871 5870 F 295 0.00 1372 reject_low 3 ALIGNMENT 120 YS2-7k24.p1k vc_1 837 507 1777 2105 C 331 79.76 1372 reject_low 1 ALIGNMENT 120 YS2-7k24.p1k vc_4 507 837 5871 6199 F 331 79.76 1372 reject_low 3 ALIGNMENT 271 YS2-7k24.p1k chr08 488 151 103906 104242 C 338 95.27 1372 accept 0 ALIGNMENT 0 YS2-7k24.p1k vc_1 506 212 2106 2105 C 295 0.00 1372 reject_low 1 ALIGNMENT 0 YS2-7k24.p1k vc_5 506 212 5026 5025 C 295 0.00 1372 reject_low 4 ALIGNMENT 0 YS2-7k24.p1k vc_3 506 212 2106 2105 C 295 0.00 1372 reject_low 2 ALIGNMENT 0 YS2-7k24.p1k vc_7 212 506 100 99 F 295 0.00 1372 reject_low 5 ALIGNMENT 120 YS2-7k24.p1k vc_3 837 507 1777 2105 C 331 79.76 1372 reject_low 2 ALIGNMENT 120 YS2-7k24.p1k vc_5 837 507 4697 5025 C 331 79.76 1372 reject_low 4 ALIGNMENT 41 YS2-7l01.q1k vc_3 327 287 2472 2512 C 41 100.00 327 reject_low 4 ALIGNMENT 224 YS2-7l01.p1k chr04 286 46 1171770 1172011 C 241 99.17 305 accept_chi 1 ALIGNMENT 41 YS2-7l01.q1k vc_1 327 287 2472 2512 C 41 100.00 327 reject_low 2 ALIGNMENT 0 YS2-7l01.q1k vc_4 62 286 5831 5830 F 225 0.00 327 reject_low 5 ALIGNMENT 0 YS2-7l01.q1k vc_7 62 289 13525 13524 F 228 0.00 327 reject_low 7 ALIGNMENT 36 YS2-7l01.q1k vc_5 324 289 1 36 C 36 100.00 327 reject_low 8 ALIGNMENT 0 YS2-7l01.q1k vc_5 288 62 37 36 C 227 0.00 327 reject_low 8 ALIGNMENT 0 YS2-7l01.q1k vc_2 286 62 2146 2145 C 225 0.00 327 reject_low 3 ALIGNMENT 41 YS2-7l01.q1k vc_4 287 327 5831 5871 F 41 100.00 327 reject_low 5 ALIGNMENT 38 YS2-7l01.q1k vc_7 290 327 13525 13562 F 38 100.00 327 reject_low 7 ALIGNMENT 236 YS2-7l01.q1k chr04 40 286 1171770 1172016 F 247 100.00 327 accept_chi 0 ALIGNMENT 0 YS2-7l01.q1k vc_1 286 62 2513 2512 C 225 0.00 327 reject_low 2 ALIGNMENT 0 YS2-7l01.q1k chr04 287 327 1172016 1172015 F 41 0.00 327 accept_chi 0 ALIGNMENT 0 YS2-7l01.p1k chr04 305 287 1171771 1171770 C 19 0.00 305 accept_chi 1 ALIGNMENT 41 YS2-7l01.q1k vc_2 327 287 2105 2145 C 41 100.00 327 reject_low 3 ALIGNMENT 0 YS2-7l01.q1k vc_5 288 62 5064 5063 C 227 0.00 327 reject_low 6 ALIGNMENT 39 YS2-7l01.q1k vc_5 327 289 5025 5063 C 39 100.00 327 reject_low 6 ALIGNMENT 0 YS2-7l01.q1k vc_3 286 62 2513 2512 C 225 0.00 327 reject_low 4 ALIGNMENT 28 YS2-7l03.q1k chr06 277 341 893 957 F 65 83.08 1309 reject_low 311 ALIGNMENT 58 YS2-7l03.q1k chr04 319 205 1530338 1530452 C 115 85.22 1309 reject_low 267 ALIGNMENT 167 YS2-7l03.q1k chr06 92 339 888 1135 F 248 90.73 1309 reject_low 61 ALIGNMENT 74 YS2-7l03.p1k chr14 830 972 783197 783335 F 143 88.11 1423 reject_low 24 ALIGNMENT 0 YS2-7l03.q1k chr02 126 909 2414 2413 F 784 0.00 1309 reject_low 231 ALIGNMENT 0 YS2-7l03.q1k chr05 276 62 575318 575317 C 215 0.00 1309 reject_low 297 ALIGNMENT 0 YS2-7l03.q1k chr04 144 62 1530441 1530440 C 83 0.00 1309 reject_low 259 ALIGNMENT 0 YS2-7l03.q1k chr13 342 909 1875 1874 F 568 0.00 1309 reject_low 176 ALIGNMENT 34 YS2-7l03.q1k chr07 341 277 1089330 1089394 C 65 86.15 1309 reject_low 298 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 7678 7677 F 568 0.00 1309 reject_low 41 ALIGNMENT 0 YS2-7l03.q1k chr07 909 198 1088971 1088970 C 712 0.00 1309 reject_low 261 ALIGNMENT 0 YS2-7l03.q1k chr12 137 239 2191 7324 F 103 0.00 1309 reject_low 322 ALIGNMENT 106 YS2-7l03.q1k chr08 92 341 1646 1895 F 250 82.00 1309 reject_low 155 ALIGNMENT 0 YS2-7l03.q1k chr12 62 276 1683 1682 F 215 0.00 1309 reject_low 310 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 1694 1693 F 568 0.00 1309 reject_low 185 ALIGNMENT 0 YS2-7l03.q1k chr10 342 909 2093 2092 F 568 0.00 1309 reject_low 139 ALIGNMENT 0 YS2-7l03.q1k chr04 909 137 1530090 1530089 C 773 0.00 1309 reject_low 227 ALIGNMENT 0 YS2-7l03.q1k chr15 127 62 1089659 1089658 C 66 0.00 1309 reject_low 178 ALIGNMENT 0 YS2-7l03.q1k chr14 342 909 1890 1889 F 568 0.00 1309 reject_low 69 ALIGNMENT 0 YS2-7l03.q1k chr04 909 320 1530339 1530338 C 590 0.00 1309 reject_low 267 ALIGNMENT 69 YS2-7l03.q1k chr14 180 319 1585 1724 F 140 84.29 1309 reject_low 238 ALIGNMENT 0 YS2-7l03.q1k chr10 342 909 2021 2020 F 568 0.00 1309 reject_low 286 ALIGNMENT 0 YS2-7l03.q1k chr14 62 239 1573 1572 F 178 0.00 1309 reject_low 278 ALIGNMENT 101 YS2-7l03.q1k chr12 38 233 2020 2215 F 196 84.69 1309|0,9 reject_low 315 ALIGNMENT 0 YS2-7l03.q1k chr12 909 137 1069628 1069627 C 773 0.00 1309 reject_low 229 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 2143 2142 F 568 0.00 1309 reject_low 32 ALIGNMENT 0 YS2-7l03.q1k chr16 126 909 1907 1906 F 784 0.00 1309 reject_low 209 ALIGNMENT 0 YS2-7l03.q1k chr04 909 342 1530389 1530388 C 568 0.00 1309 reject_low 296 ALIGNMENT 158 YS2-7l03.q1k chr04 341 38 1530136 1530439 C 304 85.20 1309 reject_low 51 ALIGNMENT 0 YS2-7l03.q1k chr08 909 126 560418 560417 C 784 0.00 1309 reject_low 232 ALIGNMENT 79 YS2-7l03.q1k chr12 341 92 1076445 1076694 C 250 78.40 1309 reject_low 190 ALIGNMENT 880 YS2-7l03.q1k chr12 1177 38 1075412 1076568 C 1140 93.07 1309 reject_low 13 ALIGNMENT 161 YS2-7l03.q1k chr05 341 38 574965 575268 C 304 85.53 1309 reject_low 38 ALIGNMENT 149 YS2-7l03.q1k chr02 38 341 1967 2270 F 304 84.21 1309 reject_low 77 ALIGNMENT 213 YS2-7l03.p1k chr03 893 580 1115 1429 C 314 91.08 1423 reject_low 20 ALIGNMENT 0 YS2-7l03.q1k chr06 110 909 1265 1264 F 800 0.00 1309 reject_low 282 ALIGNMENT 0 YS2-7l03.q1k chr12 179 126 1070016 1076264 C 54 0.00 1309 reject_low 321 ALIGNMENT 883 YS2-7l03.q1k chr16 1177 38 945109 946265 C 1140 93.16 1309 reject_low 10 ALIGNMENT 40 YS2-7l03.q1k chr05 39 109 1988 2058 F 71 85.92 1309 reject_low 281 ALIGNMENT 0 YS2-7l03.q1k chr16 909 342 946179 946178 C 568 0.00 1309 reject_low 125 ALIGNMENT 84 YS2-7l03.q1k chr07 341 128 1089186 1089399 C 214 80.84 1309 reject_low 173 ALIGNMENT 0 YS2-7l03.q1k chr06 254 909 1265 1264 F 656 0.00 1309 reject_low 168 ALIGNMENT 0 YS2-7l03.q1k chr04 909 342 1530101 1530100 C 568 0.00 1309 reject_low 50 ALIGNMENT 0 YS2-7l03.q1k chr05 110 909 2058 2057 F 800 0.00 1309 reject_low 281 ALIGNMENT 0 YS2-7l03.q1k chr15 276 62 1089654 1089653 C 215 0.00 1309 reject_low 304 ALIGNMENT 0 YS2-7l03.q1k chr05 909 342 574930 574929 C 568 0.00 1309 reject_low 37 ALIGNMENT 34 YS2-7l03.q1k chr05 341 277 575253 575317 C 65 86.15 1309 reject_low 297 ALIGNMENT 91 YS2-7l03.q1k chr02 92 319 1481 1708 F 228 81.14 1309 reject_low 162 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 2107 2106 F 568 0.00 1309 reject_low 85 ALIGNMENT 0 YS2-7l03.q1k chr12 270 909 7750 7749 F 640 0.00 1309 reject_low 88 ALIGNMENT 0 YS2-7l03.q1k chr07 909 270 1088971 1088970 C 640 0.00 1309 reject_low 87 ALIGNMENT 0 YS2-7l03.p1k chr15 62 829 1083837 1083836 F 768 0.00 1423 reject_low 3 ALIGNMENT 0 YS2-7l03.q1k chr12 126 909 7750 7749 F 784 0.00 1309 reject_low 204 ALIGNMENT 883 YS2-7l03.q1k chr13 38 1177 1788 2944 F 1140 93.07 1309 reject_low 9 ALIGNMENT 84 YS2-7l03.q1k chr08 341 128 560633 560846 C 214 80.84 1309 reject_low 174 ALIGNMENT 0 YS2-7l03.q1k chr16 909 342 945999 945998 C 568 0.00 1309 reject_low 34 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1076590 1076589 C 568 0.00 1309 reject_low 276 ALIGNMENT 880 YS2-7l03.q1k chr12 1177 38 1068749 1069905 C 1140 93.07 1309 reject_low 12 ALIGNMENT 0 YS2-7l03.q1k chr08 127 62 560847 560846 C 66 0.00 1309 reject_low 174 ALIGNMENT 0 YS2-7l03.q1k chr05 909 342 575254 575253 C 568 0.00 1309 reject_low 297 ALIGNMENT 0 YS2-7l03.q1k chr13 270 909 2091 2090 F 640 0.00 1309 reject_low 89 ALIGNMENT 60 YS2-7l03.p1k chr08 580 747 7993 8149 F 168 83.33 1423 reject_low 312 ALIGNMENT 103 YS2-7l03.q1k chr10 145 341 1933 2129 F 197 85.28 1309 reject_low 159 ALIGNMENT 76 YS2-7l03.q1k chr10 38 253 2150 2365 F 216 79.17 1309 reject_low 170 ALIGNMENT 0 YS2-7l03.q1k chr13 126 909 2091 2090 F 784 0.00 1309 reject_low 206 ALIGNMENT 0 YS2-7l03.q1k chr07 909 342 1089187 1089186 C 568 0.00 1309 reject_low 173 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 2018 2017 F 568 0.00 1309 reject_low 28 ALIGNMENT 0 YS2-7l03.q1k chr05 342 909 1894 1893 F 568 0.00 1309 reject_low 116 ALIGNMENT 170 YS2-7l03.q1k chr02 39 341 1932 2234 F 303 86.47 1309 reject_low 33 ALIGNMENT 0 YS2-7l03.q1k chr02 306 909 2414 2413 F 604 0.00 1309 reject_low 72 ALIGNMENT 139 YS2-7l03.q1k chr07 269 38 1088970 1089201 C 232 87.50 1309 reject_low 87 ALIGNMENT 48 YS2-7l03.q1k chr07 197 38 1088970 1089129 C 160 77.50 1309 reject_low 261 ALIGNMENT 142 YS2-7l03.q1k chr13 38 305 1824 2091 F 268 85.45 1309 reject_low 97 ALIGNMENT 0 YS2-7l03.q1k chr05 909 342 575038 575037 C 568 0.00 1309 reject_low 140 ALIGNMENT 0 YS2-7l03.q1k chr12 909 306 1069603 1069602 C 604 0.00 1309 reject_low 105 ALIGNMENT 0 YS2-7l03.q1k chr08 276 909 1937 1936 F 634 0.00 1309 reject_low 122 ALIGNMENT 64 YS2-7l03.q1k chr05 216 341 1481 1606 F 126 84.92 1309 reject_low 244 ALIGNMENT 161 YS2-7l03.q1k chr14 38 341 1623 1926 F 304 85.53 1309 reject_low 45 ALIGNMENT 50 YS2-7l03.q1k chr09 38 217 2203 2382 F 180 76.67 1309 reject_low 257 ALIGNMENT 108 YS2-7l03.q1k chr12 341 59 1076409 1076691 C 283 80.57 1309 reject_low 144 ALIGNMENT 154 YS2-7l03.q1k chr02 38 305 2147 2414 F 268 86.94 1309 reject_low 72 ALIGNMENT 0 YS2-7l03.q1k chr12 198 276 2216 7325 F 79 0.00 1309 reject_low 324 ALIGNMENT 0 YS2-7l03.q1k chr16 342 909 1835 1834 F 568 0.00 1309 reject_low 47 ALIGNMENT 0 YS2-7l03.q1k chr04 909 342 1530173 1530172 C 568 0.00 1309 reject_low 101 ALIGNMENT 0 YS2-7l03.q1k chr16 909 234 945963 945962 C 676 0.00 1309 reject_low 138 ALIGNMENT 0 YS2-7l03.q1k chr08 127 909 1932 1931 F 783 0.00 1309 reject_low 224 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1069639 1069638 C 568 0.00 1309 reject_low 53 ALIGNMENT 0 YS2-7l03.q1k chr07 909 342 1089079 1089078 C 568 0.00 1309 reject_low 64 ALIGNMENT 0 YS2-7l03.q1k chr16 909 342 946323 946322 C 568 0.00 1309 reject_low 287 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 2054 2053 F 568 0.00 1309 reject_low 102 ALIGNMENT 0 YS2-7l03.q1k chr14 342 909 1818 1817 F 568 0.00 1309 reject_low 192 ALIGNMENT 108 YS2-7l03.q1k chr07 341 59 1089114 1089396 C 283 80.57 1309 reject_low 141 ALIGNMENT 0 YS2-7l03.q1k chr16 234 909 1907 1906 F 676 0.00 1309 reject_low 137 ALIGNMENT 0 YS2-7l03.q1k chr14 306 909 1998 1997 F 604 0.00 1309 reject_low 98 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1076338 1076337 C 568 0.00 1309 reject_low 56 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 1783 1782 F 568 0.00 1309 reject_low 275 ALIGNMENT 34 YS2-7l03.q1k chr08 277 341 1651 1715 F 65 86.15 1309 reject_low 299 ALIGNMENT 75 YS2-7l03.q1k chr12 180 341 1694 1855 F 162 83.33 1309 reject_low 211 ALIGNMENT 161 YS2-7l03.q1k chr05 341 38 574929 575232 C 304 85.53 1309 reject_low 37 ALIGNMENT 84 YS2-7l03.q1k chr12 341 128 1069818 1070031 C 214 80.84 1309 reject_low 318 ALIGNMENT 0 YS2-7l03.q1k chr02 62 179 1497 1496 F 118 0.00 1309 reject_low 221 ALIGNMENT 0 YS2-7l03.q1k chr14 62 91 1569 1568 F 30 0.00 1309 reject_low 192 ALIGNMENT 0 YS2-7l03.q1k chr16 137 909 1882 1881 F 773 0.00 1309 reject_low 219 ALIGNMENT 0 YS2-7l03.q1k chr15 909 342 1089266 1089265 C 568 0.00 1309 reject_low 57 ALIGNMENT 56 YS2-7l03.q1k chr12 38 136 7627 7725 F 99 86.87 1309 reject_low 216 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1069783 1069782 C 568 0.00 1309 reject_low 189 ALIGNMENT 76 YS2-7l03.q1k chr10 38 289 2114 2365 F 252 77.78 1309 reject_low 183 ALIGNMENT 79 YS2-7l03.q1k chr06 38 289 1014 1265 F 252 78.17 1309 reject_low 167 ALIGNMENT 0 YS2-7l03.q1k chr09 127 909 2363 2362 F 783 0.00 1309 reject_low 293 ALIGNMENT 142 YS2-7l03.q1k chr16 38 305 1640 1907 F 268 85.45 1309 reject_low 99 ALIGNMENT 0 YS2-7l03.q1k chr16 94 62 946425 946424 C 33 0.00 1309 reject_low 125 ALIGNMENT 0 YS2-7l03.q1k chr15 909 342 1089338 1089337 C 568 0.00 1309 reject_low 70 ALIGNMENT 69 YS2-7l03.q1k chr05 319 180 575167 575306 C 140 84.29 1309 reject_low 233 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1076626 1076625 C 568 0.00 1309 reject_low 301 ALIGNMENT 25 YS2-7l03.q1k chr06 59 90 891 922 F 32 93.75 1309 reject_low 319 ALIGNMENT 0 YS2-7l03.q1k chr13 320 909 1781 1780 F 590 0.00 1309 reject_low 251 ALIGNMENT 71 YS2-7l03.q1k chr08 38 202 1736 1900 F 165 81.82 1309 reject_low 181 ALIGNMENT 98 YS2-7l03.q1k chr15 233 38 1089229 1089424 C 196 84.18 1309 reject_low 152 ALIGNMENT 155 YS2-7l03.q1k chr05 38 341 1627 1930 F 304 84.87 1309 reject_low 62 ALIGNMENT 63 YS2-7l03.q1k chr12 319 216 1076575 1076678 C 104 88.46 1309 reject_low 250 ALIGNMENT 0 YS2-7l03.q1k chr02 62 215 1497 1496 F 154 0.00 1309 reject_low 246 ALIGNMENT 0 YS2-7l03.q1k chr08 239 62 560843 560842 C 178 0.00 1309 reject_low 274 ALIGNMENT 78 YS2-7l03.q1k chr12 128 341 1678 1891 F 214 79.91 1309 reject_low 196 ALIGNMENT 0 YS2-7l03.q1k chr05 342 909 1678 1677 F 568 0.00 1309 reject_low 165 ALIGNMENT 0 YS2-7l03.q1k chr09 342 909 2326 2325 F 568 0.00 1309 reject_low 75 ALIGNMENT 880 YS2-7l03.q1k chr04 1177 38 1529211 1530367 C 1140 93.07 1309 reject_low 11 ALIGNMENT 113 YS2-7l03.q1k chr16 341 38 946106 946409 C 304 80.26 1309 reject_low 130 ALIGNMENT 158 YS2-7l03.q1k chr04 341 38 1530100 1530403 C 304 85.20 1309 reject_low 50 ALIGNMENT 79 YS2-7l03.q1k chr05 341 92 575073 575322 C 250 78.40 1309 reject_low 186 ALIGNMENT 154 YS2-7l03.q1k chr08 305 38 560417 560684 C 268 86.94 1309 reject_low 73 ALIGNMENT 155 YS2-7l03.q1k chr12 341 38 1069710 1070013 C 304 84.87 1309 reject_low 66 ALIGNMENT 142 YS2-7l03.q1k chr14 38 305 1731 1998 F 268 85.45 1309 reject_low 98 ALIGNMENT 0 YS2-7l03.q1k chr08 311 909 1828 1827 F 599 0.00 1309 reject_low 200 ALIGNMENT 0 YS2-7l03.q1k chr05 342 909 1822 1821 F 568 0.00 1309 reject_low 126 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 7642 7641 F 568 0.00 1309 reject_low 65 ALIGNMENT 0 YS2-7l03.q1k chr06 342 909 1029 1028 F 568 0.00 1309 reject_low 184 ALIGNMENT 0 YS2-7l03.q1k chr13 62 276 1667 1666 F 215 0.00 1309 reject_low 302 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1076374 1076373 C 568 0.00 1309 reject_low 67 ALIGNMENT 158 YS2-7l03.q1k chr12 341 38 1076337 1076640 C 304 85.20 1309 reject_low 56 ALIGNMENT 54 YS2-7l03.q1k chr12 240 341 7325 7426 F 102 86.27 1309 reject_low 322 ALIGNMENT 143 YS2-7l03.q1k chr02 38 341 1895 2198 F 304 83.55 1309 reject_low 83 ALIGNMENT 886 YS2-7l03.q1k chr14 38 1177 1695 2851 F 1140 93.16 1309 reject_low 5 ALIGNMENT 0 YS2-7l03.q1k chr16 62 179 1494 1493 F 118 0.00 1309 reject_low 240 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1076410 1076409 C 568 0.00 1309 reject_low 144 ALIGNMENT 880 YS2-7l03.q1k chr15 1177 38 1088376 1089532 C 1140 93.07 1309 reject_low 3 ALIGNMENT 0 YS2-7l03.q1k chr10 342 909 2201 2200 F 568 0.00 1309 reject_low 154 ALIGNMENT 67 YS2-7l03.q1k chr04 341 169 1530280 1530452 C 173 80.92 1309 reject_low 241 ALIGNMENT 0 YS2-7l03.q1k chr09 110 909 2382 2381 F 800 0.00 1309 reject_low 283 ALIGNMENT 72 YS2-7l03.q1k chr02 180 341 1497 1658 F 162 82.72 1309 reject_low 221 ALIGNMENT 161 YS2-7l03.q1k chr07 341 38 1089006 1089309 C 304 85.53 1309 reject_low 39 ALIGNMENT 0 YS2-7l03.p1k chr14 62 829 783197 783196 F 768 0.00 1423 reject_low 24 ALIGNMENT 54 YS2-7l03.q1k chr05 341 240 575217 575318 C 102 86.27 1309 reject_low 272 ALIGNMENT 0 YS2-7l03.q1k chr05 62 215 1481 1480 F 154 0.00 1309 reject_low 244 ALIGNMENT 48 YS2-7l03.q1k chr05 197 38 574893 575052 C 160 77.50 1309 reject_low 260 ALIGNMENT 158 YS2-7l03.q1k chr12 38 341 1696 1999 F 304 85.20 1309 reject_low 52 ALIGNMENT 0 YS2-7l03.q1k chr05 342 909 1930 1929 F 568 0.00 1309 reject_low 62 ALIGNMENT 866 YS2-7l03.q1k chr02 38 1177 2111 3269 F 1140 92.63 1309 reject_low 2 ALIGNMENT 34 YS2-7l03.q1k chr15 341 277 1089589 1089653 C 65 86.15 1309 reject_low 304 ALIGNMENT 69 YS2-7l03.q1k chr16 180 319 1494 1633 F 140 84.29 1309 reject_low 240 ALIGNMENT 140 YS2-7l03.q1k chr02 38 341 1751 2054 F 304 83.22 1309 reject_low 102 ALIGNMENT 79 YS2-7l03.q1k chr12 92 341 7321 7570 F 250 78.40 1309 reject_low 188 ALIGNMENT 98 YS2-7l03.q1k chr12 233 38 1076265 1076460 C 196 84.18 1309|9,0 reject_low 316 ALIGNMENT 58 YS2-7l03.q1k chr16 38 125 1820 1907 F 88 89.77 1309 reject_low 209 ALIGNMENT 84 YS2-7l03.q1k chr15 341 128 1089445 1089658 C 214 80.84 1309 reject_low 178 ALIGNMENT 84 YS2-7l03.q1k chr12 341 128 1076481 1076694 C 214 80.84 1309 reject_low 175 ALIGNMENT 0 YS2-7l03.q1k chr14 342 909 1962 1961 F 568 0.00 1309 reject_low 46 ALIGNMENT 0 YS2-7l03.q1k chr07 909 342 1089151 1089150 C 568 0.00 1309 reject_low 187 ALIGNMENT 161 YS2-7l03.q1k chr16 38 341 1532 1835 F 304 85.53 1309 reject_low 47 ALIGNMENT 108 YS2-7l03.q1k chr14 59 341 1572 1854 F 283 80.57 1309 reject_low 146 ALIGNMENT 155 YS2-7l03.q1k chr15 341 38 1089337 1089640 C 304 84.87 1309 reject_low 70 ALIGNMENT 0 YS2-7l03.q1k chr16 342 909 1583 1582 F 568 0.00 1309 reject_low 280 ALIGNMENT 139 YS2-7l03.q1k chr12 38 269 7519 7750 F 232 87.50 1309 reject_low 88 ALIGNMENT 54 YS2-7l03.q1k chr12 240 341 1682 1783 F 102 86.27 1309 reject_low 275 ALIGNMENT 121 YS2-7l03.q1k chr06 145 341 905 1101 F 197 88.32 1309 reject_low 319 ALIGNMENT 76 YS2-7l03.q1k chr06 38 253 1050 1265 F 216 79.17 1309 reject_low 168 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1069963 1069962 C 568 0.00 1309 reject_low 314,325 ALIGNMENT 0 YS2-7l03.q1k chr06 340 909 1135 1134 F 570 0.00 1309 reject_low 61 ALIGNMENT 0 YS2-7l03.q1k chr07 909 126 1088971 1088970 C 784 0.00 1309 reject_low 203 ALIGNMENT 158 YS2-7l03.q1k chr15 341 38 1089301 1089604 C 304 85.20 1309 reject_low 58 ALIGNMENT 50 YS2-7l03.q1k chr08 136 38 560442 560540 C 99 84.85 1309 reject_low 243 ALIGNMENT 0 YS2-7l03.q1k chr05 239 62 575319 575318 C 178 0.00 1309 reject_low 272 ALIGNMENT 0 YS2-7l03.q1k chr04 909 126 1530065 1530064 C 784 0.00 1309 reject_low 201 ALIGNMENT 203 YS2-7l03.q1k chr02 38 341 1643 1946 F 304 90.13 1309 reject_low 26 ALIGNMENT 0 YS2-7l03.q1k chr15 179 62 1089643 1089642 C 118 0.00 1309 reject_low 239 ALIGNMENT 136 YS2-7l03.q1k chr12 269 38 1069602 1069833 C 232 87.07 1309 reject_low 109 ALIGNMENT 0 YS2-7l03.q1k chr08 179 62 560831 560830 C 118 0.00 1309 reject_low 235 ALIGNMENT 161 YS2-7l03.q1k chr12 38 341 7411 7714 F 304 85.53 1309 reject_low 42 ALIGNMENT 0 YS2-7l03.q1k chr05 62 179 1481 1480 F 118 0.00 1309 reject_low 212 ALIGNMENT 0 YS2-7l03.q1k chr04 909 234 1530065 1530064 C 676 0.00 1309 reject_low 150 ALIGNMENT 0 YS2-7l03.q1k chr16 909 342 946071 946070 C 568 0.00 1309 reject_low 80 ALIGNMENT 34 YS2-7l03.q1k chr04 341 277 1530388 1530452 C 65 86.15 1309 reject_low 296 ALIGNMENT 0 YS2-7l03.q1k chr08 62 276 1651 1650 F 215 0.00 1309 reject_low 299 ALIGNMENT 0 YS2-7l03.q1k chr16 909 306 945963 945962 C 604 0.00 1309 reject_low 100 ALIGNMENT 0 YS2-7l03.q1k chr16 909 137 945988 945987 C 773 0.00 1309 reject_low 220 ALIGNMENT 0 YS2-7l03.p1k chr02 829 62 6689 6688 C 768 0.00 1423 reject_low 2 ALIGNMENT 0 YS2-7l03.q1k chr05 62 127 1465 1464 F 66 0.00 1309 reject_low 165 ALIGNMENT 0 YS2-7l03.q1k chr07 909 342 1089115 1089114 C 568 0.00 1309 reject_low 141 ALIGNMENT 170 YS2-7l03.q1k chr12 38 341 1840 2143 F 304 86.51 1309 reject_low 32 ALIGNMENT 0 YS2-7l03.q1k chr14 342 909 1674 1673 F 568 0.00 1309 reject_low 278 ALIGNMENT 0 YS2-7l03.q1k chr02 62 239 1485 1484 F 178 0.00 1309 reject_low 271 ALIGNMENT 883 YS2-7l03.q1k chr12 38 1177 7447 8603 F 1140 93.07 1309 reject_low 8 ALIGNMENT 0 YS2-7l03.q1k chr05 62 91 1465 1464 F 30 0.00 1309 reject_low 153 ALIGNMENT 84 YS2-7l03.q1k chr13 128 341 1662 1875 F 214 80.84 1309 reject_low 176 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 1550 1549 F 568 0.00 1309 reject_low 295 ALIGNMENT 34 YS2-7l03.q1k chr12 341 277 1069962 1070026 C 65 86.15 1309 reject_low 314,325 ALIGNMENT 0 YS2-7l03.q1k chr05 909 320 575204 575203 C 590 0.00 1309 reject_low 247 ALIGNMENT 779 YS2-7l03.q1k chr05 38 1177 1771 2915 F 1140 90.53 1309 reject_low 16 ALIGNMENT 0 YS2-7l03.q1k chr07 909 320 1089281 1089280 C 590 0.00 1309 reject_low 248 ALIGNMENT 137 YS2-7l03.q1k chr06 38 341 906 1209 F 304 82.89 1309 reject_low 114 ALIGNMENT 0 YS2-7l03.q1k chr13 342 909 1983 1982 F 568 0.00 1309 reject_low 68 ALIGNMENT 0 YS2-7l03.q1k chr05 342 909 1606 1605 F 568 0.00 1309 reject_low 244 ALIGNMENT 0 YS2-7l03.q1k chr12 91 62 1076695 1076694 C 30 0.00 1309 reject_low 190 ALIGNMENT 886 YS2-7l03.q1k chr07 1177 38 1088117 1089273 C 1140 93.25 1309 reject_low 4 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1076446 1076445 C 568 0.00 1309 reject_low 190 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 1747 1746 F 568 0.00 1309 reject_low 310 ALIGNMENT 40 YS2-7l03.q1k chr10 39 109 2295 2365 F 71 85.92 1309 reject_low 284 ALIGNMENT 0 YS2-7l03.q1k chr10 62 96 1921 1920 F 35 0.00 1309 reject_low 149 ALIGNMENT 840 YS2-7l03.q1k chr08 59 1177 1649 2800 F 1119 92.40 1309 reject_low 15 ALIGNMENT 50 YS2-7l03.q1k chr16 341 252 946322 946411 C 90 86.67 1309 reject_low 287 ALIGNMENT 0 YS2-7l03.q1k chr14 320 909 1688 1687 F 590 0.00 1309 reject_low 252 ALIGNMENT 58 YS2-7l03.q1k chr15 125 38 1089229 1089316 C 88 89.77 1309 reject_low 208 ALIGNMENT 34 YS2-7l03.q1k chr14 277 341 1574 1638 F 65 86.15 1309 reject_low 303 ALIGNMENT 95 YS2-7l03.q1k chr02 38 341 1571 1874 F 304 78.29 1309 reject_low 158 ALIGNMENT 0 YS2-7l03.q1k chr13 62 127 1662 1661 F 66 0.00 1309 reject_low 176 ALIGNMENT 0 YS2-7l03.q1k chr14 62 215 1585 1584 F 154 0.00 1309 reject_low 252 ALIGNMENT 0 YS2-7l03.q1k chr12 137 909 7725 7724 F 773 0.00 1309 reject_low 216 ALIGNMENT 0 YS2-7l03.q1k chr13 342 909 1947 1946 F 568 0.00 1309 reject_low 145 ALIGNMENT 58 YS2-7l03.q1k chr05 125 38 574893 574980 C 88 89.77 1309 reject_low 202 ALIGNMENT 0 YS2-7l03.q1k chr02 234 909 2414 2413 F 676 0.00 1309 reject_low 156 ALIGNMENT 0 YS2-7l03.q1k chr05 62 276 1470 1469 F 215 0.00 1309 reject_low 308 ALIGNMENT 0 YS2-7l03.q1k chr08 342 909 1751 1750 F 568 0.00 1309 reject_low 245 ALIGNMENT 0 YS2-7l03.q1k chr12 909 270 1069603 1069602 C 640 0.00 1309 reject_low 109 ALIGNMENT 52 YS2-7l03.q1k chr02 38 125 2327 2414 F 88 87.50 1309 reject_low 231 ALIGNMENT 53 YS2-7l03.q1k chr15 136 38 1089254 1089352 C 99 85.86 1309 reject_low 230 ALIGNMENT 110 YS2-7l03.q1k chr10 97 341 1921 2165 F 245 82.86 1309 reject_low 149 ALIGNMENT 0 YS2-7l03.q1k chr10 62 161 1914 1913 F 100 0.00 1309 reject_low 139 ALIGNMENT 0 YS2-7l03.q1k chr12 306 909 7750 7749 F 604 0.00 1309 reject_low 96 ALIGNMENT 0 YS2-7l03.q1k chr07 91 62 1089400 1089399 C 30 0.00 1309 reject_low 187 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 2198 2197 F 568 0.00 1309 reject_low 83 ALIGNMENT 63 YS2-7l03.q1k chr15 319 216 1089539 1089642 C 104 88.46 1309 reject_low 253 ALIGNMENT 0 YS2-7l03.q1k chr07 239 62 1089396 1089395 C 178 0.00 1309 reject_low 273 ALIGNMENT 0 YS2-7l03.q1k chr12 225 224 2207 7345 F 0 0.00 1309 reject_low 315 ALIGNMENT 0 YS2-7l03.q1k chr14 342 909 1638 1637 F 568 0.00 1309 reject_low 303 ALIGNMENT 40 YS2-7l03.q1k chr06 39 109 1195 1265 F 71 85.92 1309 reject_low 282 ALIGNMENT 0 YS2-7l03.q1k chr12 239 137 1070028 1076289 C 103 0.00 1309 reject_low 323 ALIGNMENT 101 YS2-7l03.q1k chr05 233 38 574893 575088 C 196 84.69 1309 reject_low 132 ALIGNMENT 0 YS2-7l03.q1k chr09 62 96 2010 2009 F 35 0.00 1309 reject_low 111 ALIGNMENT 0 YS2-7l03.q1k chr14 342 909 1926 1925 F 568 0.00 1309 reject_low 45 ALIGNMENT 82 YS2-7l03.q1k chr05 38 253 1843 2058 F 216 80.09 1309 reject_low 163 ALIGNMENT 0 YS2-7l03.q1k chr04 168 62 1530453 1530452 C 107 0.00 1309 reject_low 241 ALIGNMENT 77 YS2-7l03.q1k chr09 157 341 1998 2182 F 185 81.62 1309 reject_low 198 ALIGNMENT 0 YS2-7l03.q1k chr16 306 909 1907 1906 F 604 0.00 1309 reject_low 99 ALIGNMENT 0 YS2-7l03.q1k chr12 320 909 7476 7475 F 590 0.00 1309 reject_low 320 ALIGNMENT 154 YS2-7l03.q1k chr02 38 269 2183 2414 F 232 89.66 1309 reject_low 59 ALIGNMENT 136 YS2-7l03.q1k chr15 269 38 1089229 1089460 C 232 87.07 1309 reject_low 110 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 1910 1909 F 568 0.00 1309 reject_low 81 ALIGNMENT 52 YS2-7l03.q1k chr08 125 38 560417 560504 C 88 87.50 1309 reject_low 232 ALIGNMENT 0 YS2-7l03.q1k chr13 342 909 1731 1730 F 568 0.00 1309 reject_low 302 ALIGNMENT 0 YS2-7l03.q1k chr09 62 264 1998 1997 F 203 0.00 1309 reject_low 306 ALIGNMENT 0 YS2-7l03.q1k chr16 62 215 1494 1493 F 154 0.00 1309 reject_low 254 ALIGNMENT 0 YS2-7l03.q1k chr06 62 167 892 891 F 106 0.00 1309 reject_low 161 ALIGNMENT 63 YS2-7l03.q1k chr05 319 216 575203 575306 C 104 88.46 1309 reject_low 247 ALIGNMENT 0 YS2-7l03.q1k chr12 198 909 7750 7749 F 712 0.00 1309 reject_low 262 ALIGNMENT 0 YS2-7l03.q1k chr16 62 239 1482 1481 F 178 0.00 1309 reject_low 280 ALIGNMENT 155 YS2-7l03.q1k chr07 341 38 1089078 1089381 C 304 84.87 1309 reject_low 64 ALIGNMENT 0 YS2-7l03.q1k chr09 290 909 2382 2381 F 620 0.00 1309 reject_low 182 ALIGNMENT 58 YS2-7l03.q1k chr04 341 145 1530244 1530440 C 197 77.66 1309 reject_low 259 ALIGNMENT 69 YS2-7l03.q1k chr12 319 180 1076539 1076678 C 140 84.29 1309 reject_low 236 ALIGNMENT 158 YS2-7l03.q1k chr12 341 38 1069638 1069941 C 304 85.20 1309 reject_low 53 ALIGNMENT 77 YS2-7l03.q1k chr05 38 217 1879 2058 F 180 81.67 1309 reject_low 166 ALIGNMENT 155 YS2-7l03.q1k chr12 38 341 7339 7642 F 304 84.87 1309 reject_low 65 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 7570 7569 F 568 0.00 1309 reject_low 188 ALIGNMENT 0 YS2-7l03.q1k chr16 62 127 1478 1477 F 66 0.00 1309 reject_low 179 ALIGNMENT 58 YS2-7l03.q1k chr12 38 125 2128 2215 F 88 89.77 1309 reject_low 317,320 ALIGNMENT 0 YS2-7l03.q1k chr14 62 179 1585 1584 F 118 0.00 1309 reject_low 238 ALIGNMENT 123 YS2-7l03.q1k chr08 38 275 1700 1937 F 238 84.87 1309 reject_low 122 ALIGNMENT 0 YS2-7l03.q1k chr09 342 909 2182 2181 F 568 0.00 1309 reject_low 198 ALIGNMENT 0 YS2-7l03.q1k chr13 320 909 1817 1816 F 590 0.00 1309 reject_low 237 ALIGNMENT 139 YS2-7l03.q1k chr04 305 38 1530064 1530331 C 268 85.07 1309 reject_low 104 ALIGNMENT 0 YS2-7l03.q1k chr05 91 62 575323 575322 C 30 0.00 1309 reject_low 186 ALIGNMENT 0 YS2-7l03.q1k chr07 909 137 1088996 1088995 C 773 0.00 1309 reject_low 215 ALIGNMENT 0 YS2-7l03.q1k chr12 62 91 7321 7320 F 30 0.00 1309 reject_low 188 ALIGNMENT 0 YS2-7l03.p1k chr08 748 774 8150 8169 F 27 0.00 1423 reject_low 312 ALIGNMENT 155 YS2-7l03.q1k chr13 38 341 1680 1983 F 304 84.87 1309 reject_low 68 ALIGNMENT 0 YS2-7l03.q1k chr12 909 198 1069603 1069602 C 712 0.00 1309 reject_low 269 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1069819 1069818 C 568 0.00 1309 reject_low 318 ALIGNMENT 122 YS2-7l03.p1k chr11 829 579 665068 665307 C 251 86.45 1423 reject_low 22 ALIGNMENT 0 YS2-7l03.q1k chr08 62 91 1646 1645 F 30 0.00 1309 reject_low 155 ALIGNMENT 50 YS2-7l03.q1k chr10 38 217 2186 2365 F 180 76.67 1309 reject_low 258 ALIGNMENT 128 YS2-7l03.q1k chr05 38 316 1483 1761 F 279 83.15 1309 reject_low 121 ALIGNMENT 0 YS2-7l03.q1k chr07 909 342 1089331 1089330 C 568 0.00 1309 reject_low 298 ALIGNMENT 0 YS2-7l03.q1k chr02 62 91 1481 1480 F 30 0.00 1309 reject_low 162 ALIGNMENT 0 YS2-7l03.q1k chr07 909 234 1088971 1088970 C 676 0.00 1309 reject_low 133 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 7426 7425 F 568 0.00 1309 reject_low 322 ALIGNMENT 48 YS2-7l03.q1k chr16 38 197 1748 1907 F 160 77.50 1309 reject_low 265 ALIGNMENT 84 YS2-7l03.q1k chr05 341 128 575109 575322 C 214 80.84 1309 reject_low 172 ALIGNMENT 0 YS2-7l03.q1k chr12 126 127 2216 7320 F 2 0.00 1309 reject_low 317 ALIGNMENT 0 YS2-7l03.q1k chr08 215 62 560831 560830 C 154 0.00 1309 reject_low 249 ALIGNMENT 75 YS2-7l03.q1k chr08 128 310 1646 1828 F 183 81.42 1309 reject_low 200 ALIGNMENT 34 YS2-7l03.q1k chr09 265 341 1998 2074 F 77 83.12 1309 reject_low 306 ALIGNMENT 167 YS2-7l03.q1k chr09 49 339 1998 2288 F 291 86.94 1309 reject_low 35 ALIGNMENT 0 YS2-7l03.q1k chr15 909 137 1089255 1089254 C 773 0.00 1309 reject_low 230 ALIGNMENT 0 YS2-7l03.q1k chr08 342 909 1895 1894 F 568 0.00 1309 reject_low 155 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1069927 1069926 C 568 0.00 1309 reject_low 323 ALIGNMENT 0 YS2-7l03.q1k chr16 909 342 946035 946034 C 568 0.00 1309 reject_low 31 ALIGNMENT 58 YS2-7l03.q1k chr13 38 125 2004 2091 F 88 89.77 1309 reject_low 206 ALIGNMENT 23 YS2-7l03.p1k chr08 775 830 8170 8225 F 56 82.14 1423 reject_low 312 ALIGNMENT 139 YS2-7l03.q1k chr12 305 38 1076265 1076532 C 268 85.07 1309 reject_low 106 ALIGNMENT 0 YS2-7l03.q1k chr16 320 909 1597 1596 F 590 0.00 1309 reject_low 254 ALIGNMENT 83 YS2-7l03.q1k chr09 193 341 1998 2146 F 149 86.58 1309 reject_low 195 ALIGNMENT 34 YS2-7l03.q1k chr13 277 341 1667 1731 F 65 86.15 1309 reject_low 302 ALIGNMENT 79 YS2-7l03.q1k chr12 341 92 1069782 1070031 C 250 78.40 1309 reject_low 189 ALIGNMENT 0 YS2-7l03.q1k chr14 342 909 1854 1853 F 568 0.00 1309 reject_low 146 ALIGNMENT 97 YS2-7l03.q1k chr12 92 341 1678 1927 F 250 80.80 1309 reject_low 160 ALIGNMENT 0 YS2-7l03.q1k chr06 342 909 1065 1064 F 568 0.00 1309 reject_low 161 ALIGNMENT 45 YS2-7l03.q1k chr12 197 38 1069602 1069761 C 160 76.88 1309 reject_low 269 ALIGNMENT 83 YS2-7l03.q1k chr04 341 97 1530208 1530452 C 245 79.18 1309 reject_low 171 ALIGNMENT 101 YS2-7l03.q1k chr16 233 38 945962 946157 C 196 84.69 1309 reject_low 138 ALIGNMENT 139 YS2-7l03.q1k chr12 38 269 1984 2215 F 232 87.50 1309 reject_low 313 ALIGNMENT 145 YS2-7l03.p1k chr03 830 579 4072 4323 C 252 88.10 1423 reject_low 21 ALIGNMENT 54 YS2-7l03.q1k chr14 240 341 1573 1674 F 102 86.27 1309 reject_low 278 ALIGNMENT 136 YS2-7l03.q1k chr12 269 38 1076265 1076496 C 232 87.07 1309 reject_low 314 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 2090 2089 F 568 0.00 1309 reject_low 128 ALIGNMENT 0 YS2-7l03.q1k chr15 909 234 1089230 1089229 C 676 0.00 1309 reject_low 152 ALIGNMENT 63 YS2-7l03.q1k chr12 216 319 7337 7440 F 104 88.46 1309|9,0 reject_low 315 ALIGNMENT 0 YS2-7l03.q1k chr05 340 909 1964 1963 F 570 0.00 1309 reject_low 25 ALIGNMENT 142 YS2-7l03.q1k chr12 38 305 1948 2215 F 268 85.45 1309 reject_low 95 ALIGNMENT 49 YS2-7l03.p1k chr02 999 830 6527 6688 C 170 81.76 1423 reject_low 2 ALIGNMENT 45 YS2-7l03.q1k chr06 240 341 892 993 F 102 83.33 1309 reject_low 290 ALIGNMENT 0 YS2-7l03.q1k chr10 62 144 1933 1932 F 83 0.00 1309 reject_low 159 ALIGNMENT 0 YS2-7l03.q1k chr05 342 909 1750 1749 F 568 0.00 1309 reject_low 112 ALIGNMENT 883 YS2-7l03.q1k chr12 38 1177 1912 3068 F 1140 93.07 1309 reject_low 7 ALIGNMENT 52 YS2-7l03.q1k chr04 319 241 1530374 1530452 C 79 91.14 1309 reject_low 288 ALIGNMENT 34 YS2-7l03.q1k chr08 341 277 560777 560841 C 65 86.15 1309 reject_low 300 ALIGNMENT 141 YS2-7l03.q1k chr05 59 341 1468 1750 F 283 84.45 1309 reject_low 112 ALIGNMENT 0 YS2-7l03.q1k chr12 91 62 1070032 1070031 C 30 0.00 1309 reject_low 189 ALIGNMENT 0 YS2-7l03.q1k chr12 909 126 1069603 1069602 C 784 0.00 1309 reject_low 205 ALIGNMENT 53 YS2-7l03.q1k chr05 240 319 1469 1548 F 80 91.25 1309 reject_low 285 ALIGNMENT 0 YS2-7l03.q1k chr08 909 342 560454 560453 C 568 0.00 1309 reject_low 118 ALIGNMENT 56 YS2-7l03.q1k chr05 136 38 574918 575016 C 99 86.87 1309 reject_low 214 ALIGNMENT 177 YS2-7l03.q1k chr10 38 339 1970 2271 F 302 87.42 1309 reject_low 29 ALIGNMENT 0 YS2-7l03.q1k chr05 909 126 574894 574893 C 784 0.00 1309 reject_low 202 ALIGNMENT 69 YS2-7l03.q1k chr16 341 180 946250 946411 C 162 82.10 1309 reject_low 226 ALIGNMENT 34 YS2-7l03.q1k chr12 341 277 1076625 1076689 C 65 86.15 1309 reject_low 301 ALIGNMENT 0 YS2-7l03.q1k chr08 909 342 560562 560561 C 568 0.00 1309 reject_low 127 ALIGNMENT 92 YS2-7l03.q1k chr16 319 131 946236 946424 C 189 84.13 1309 reject_low 164 ALIGNMENT 0 YS2-7l03.q1k chr12 909 320 1076540 1076539 C 590 0.00 1309 reject_low 236 ALIGNMENT 0 YS2-7l03.q1k chr07 276 62 1089395 1089394 C 215 0.00 1309 reject_low 298 ALIGNMENT 36 YS2-7l03.q1k chr06 65 126 1185 1246 F 62 87.10 1309 reject_low 292 ALIGNMENT 155 YS2-7l03.q1k chr14 38 341 1587 1890 F 304 84.87 1309 reject_low 69 ALIGNMENT 58 YS2-7l03.q1k chr07 125 38 1088970 1089057 C 88 89.77 1309 reject_low 203 ALIGNMENT 139 YS2-7l03.q1k chr05 269 38 574893 575124 C 232 87.50 1309 reject_low 86 ALIGNMENT 0 YS2-7l03.q1k chr06 62 203 892 891 F 142 0.00 1309 reject_low 184 ALIGNMENT 154 YS2-7l03.q1k chr08 269 38 560417 560648 C 232 89.66 1309 reject_low 60 ALIGNMENT 0 YS2-7l03.q1k chr13 198 909 2091 2090 F 712 0.00 1309 reject_low 263 ALIGNMENT 58 YS2-7l03.q1k chr12 125 38 1076265 1076352 C 88 89.77 1309 reject_low 318,321 ALIGNMENT 0 YS2-7l03.q1k chr04 909 342 1530209 1530208 C 568 0.00 1309 reject_low 171 ALIGNMENT 0 YS2-7l03.q1k chr14 342 909 1782 1781 F 568 0.00 1309 reject_low 177 ALIGNMENT 0 YS2-7l03.q1k chr06 342 909 993 992 F 568 0.00 1309 reject_low 290 ALIGNMENT 0 YS2-7l03.q1k chr05 215 62 575307 575306 C 154 0.00 1309 reject_low 247 ALIGNMENT 0 YS2-7l03.q1k chr13 306 909 2091 2090 F 604 0.00 1309 reject_low 97 ALIGNMENT 0 YS2-7l03.q1k chr05 342 909 1534 1533 F 568 0.00 1309 reject_low 308 ALIGNMENT 0 YS2-7l03.q1k chr14 320 909 1724 1723 F 590 0.00 1309 reject_low 238 ALIGNMENT 161 YS2-7l03.q1k chr07 341 38 1089042 1089345 C 304 85.53 1309 reject_low 40 ALIGNMENT 108 YS2-7l03.q1k chr16 59 341 1481 1763 F 283 80.57 1309 reject_low 148 ALIGNMENT 0 YS2-7l03.q1k chr12 909 306 1076266 1076265 C 604 0.00 1309 reject_low 106 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1076482 1076481 C 568 0.00 1309 reject_low 175 ALIGNMENT 0 YS2-7l03.q1k chr04 909 342 1530281 1530280 C 568 0.00 1309 reject_low 241 ALIGNMENT 84 YS2-7l03.q1k chr06 204 341 892 1029 F 138 88.41 1309 reject_low 184 ALIGNMENT 0 YS2-7l03.q1k chr14 198 909 1998 1997 F 712 0.00 1309 reject_low 264 ALIGNMENT 0 YS2-7l03.q1k chr16 909 342 946107 946106 C 568 0.00 1309 reject_low 130 ALIGNMENT 0 YS2-7l03.q1k chr10 342 909 1985 1984 F 568 0.00 1309 reject_low 309 ALIGNMENT 54 YS2-7l03.q1k chr08 41 126 1847 1932 F 86 88.37 1309 reject_low 224 ALIGNMENT 76 YS2-7l03.q1k chr09 38 289 2131 2382 F 252 77.78 1309 reject_low 182 ALIGNMENT 0 YS2-7l03.q1k chr09 342 909 2074 2073 F 568 0.00 1309 reject_low 306 ALIGNMENT 69 YS2-7l03.q1k chr12 319 180 1069876 1070015 C 140 84.29 1309 reject_low 321 ALIGNMENT 116 YS2-7l03.q1k chr02 38 341 1787 2090 F 304 80.59 1309 reject_low 128 ALIGNMENT 854 YS2-7l03.q1k chr08 1177 38 559562 560720 C 1140 92.37 1309 reject_low 14 ALIGNMENT 0 YS2-7l03.q1k chr16 179 62 946412 946411 C 118 0.00 1309 reject_low 226 ALIGNMENT 0 YS2-7l03.q1k chr12 62 127 1678 1677 F 66 0.00 1309 reject_low 196 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 7390 7389 F 568 0.00 1309 reject_low 313,324 ALIGNMENT 54 YS2-7l03.q1k chr08 341 240 560741 560842 C 102 86.27 1309 reject_low 274 ALIGNMENT 90 YS2-7l03.q1k chr05 128 341 1465 1678 F 214 81.78 1309 reject_low 165 ALIGNMENT 152 YS2-7l03.q1k chr09 38 341 2023 2326 F 304 84.54 1309 reject_low 75 ALIGNMENT 78 YS2-7l03.q1k chr10 198 341 1914 2057 F 144 86.11 1309 reject_low 199 ALIGNMENT 0 YS2-7l03.q1k chr06 342 909 957 956 F 568 0.00 1309 reject_low 311 ALIGNMENT 0 YS2-7l03.p1k chr03 578 62 4324 4323 C 517 0.00 1423 reject_low 21 ALIGNMENT 0 YS2-7l03.q1k chr08 342 909 1715 1714 F 568 0.00 1309 reject_low 299 ALIGNMENT 161 YS2-7l03.q1k chr13 38 341 1752 2055 F 304 85.53 1309 reject_low 44 ALIGNMENT 54 YS2-7l03.q1k chr13 240 341 1666 1767 F 102 86.27 1309 reject_low 277 ALIGNMENT 73 YS2-7l03.q1k chr12 216 341 1694 1819 F 126 87.30 1309 reject_low 213 ALIGNMENT 147 YS2-7l03.q1k chr09 97 339 2010 2252 F 243 88.07 1309 reject_low 111 ALIGNMENT 101 YS2-7l03.q1k chr14 38 233 1803 1998 F 196 84.69 1309 reject_low 136 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 7534 7533 F 568 0.00 1309 reject_low 317 ALIGNMENT 0 YS2-7l03.q1k chr09 62 192 1998 1997 F 131 0.00 1309 reject_low 195 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 2306 2305 F 568 0.00 1309 reject_low 49 ALIGNMENT 48 YS2-7l03.q1k chr12 38 197 7591 7750 F 160 77.50 1309 reject_low 262 ALIGNMENT 108 YS2-7l03.q1k chr15 341 59 1089373 1089655 C 283 80.57 1309 reject_low 147 ALIGNMENT 0 YS2-7l03.q1k chr05 342 909 1714 1713 F 568 0.00 1309 reject_low 153 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 2179 2178 F 568 0.00 1309 reject_low 36 ALIGNMENT 161 YS2-7l03.q1k chr12 38 341 7375 7678 F 304 85.53 1309 reject_low 41 ALIGNMENT 0 YS2-7l03.q1k chr06 62 276 893 892 F 215 0.00 1309 reject_low 311 ALIGNMENT 0 YS2-7l03.q1k chr15 909 126 1089230 1089229 C 784 0.00 1309 reject_low 208 ALIGNMENT 82 YS2-7l03.q1k chr08 341 92 560597 560846 C 250 78.80 1309 reject_low 180 ALIGNMENT 0 YS2-7l03.q1k chr05 909 137 574919 574918 C 773 0.00 1309 reject_low 214 ALIGNMENT 0 YS2-7l03.q1k chr16 130 62 946425 946424 C 69 0.00 1309 reject_low 164 ALIGNMENT 0 YS2-7l03.q1k chr08 909 342 560490 560489 C 568 0.00 1309 reject_low 115 ALIGNMENT 0 YS2-7l03.q1k chr08 909 342 560598 560597 C 568 0.00 1309 reject_low 180 ALIGNMENT 0 YS2-7l03.q1k chr12 909 234 1069603 1069602 C 676 0.00 1309 reject_low 151 ALIGNMENT 48 YS2-7l03.q1k chr14 38 197 1839 1998 F 160 77.50 1309 reject_low 264 ALIGNMENT 155 YS2-7l03.q1k chr16 38 341 1496 1799 F 304 84.87 1309 reject_low 71 ALIGNMENT 0 YS2-7l03.q1k chr02 320 909 1708 1707 F 590 0.00 1309 reject_low 162 ALIGNMENT 128 YS2-7l03.q1k chr02 38 341 1859 2162 F 304 81.91 1309 reject_low 120 ALIGNMENT 0 YS2-7l03.q1k chr16 342 909 1799 1798 F 568 0.00 1309 reject_low 71 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 1874 1873 F 568 0.00 1309 reject_low 158 ALIGNMENT 101 YS2-7l03.q1k chr07 233 38 1088970 1089165 C 196 84.69 1309 reject_low 133 ALIGNMENT 0 YS2-7l03.q1k chr07 215 62 1089384 1089383 C 154 0.00 1309 reject_low 248 ALIGNMENT 0 YS2-7l03.q1k chr05 254 909 2058 2057 F 656 0.00 1309 reject_low 163 ALIGNMENT 0 YS2-7l03.q1k chr15 909 320 1089504 1089503 C 590 0.00 1309 reject_low 239 ALIGNMENT 0 YS2-7l03.q1k chr12 224 225 1070007 1076273 C 0 0.00 1309 reject_low 316 ALIGNMENT 0 YS2-7l03.q1k chr10 62 276 1921 1920 F 215 0.00 1309 reject_low 309 ALIGNMENT 119 YS2-7l03.q1k chr05 38 341 1519 1822 F 304 80.92 1309 reject_low 126 ALIGNMENT 139 YS2-7l03.q1k chr12 305 38 1069602 1069869 C 268 85.07 1309 reject_low 105 ALIGNMENT 0 YS2-7l03.q1k chr08 203 909 1900 1899 F 707 0.00 1309 reject_low 181 ALIGNMENT 137 YS2-7l03.q1k chr08 341 38 560489 560792 C 304 82.89 1309 reject_low 115 ALIGNMENT 136 YS2-7l03.q1k chr04 269 38 1530064 1530295 C 232 87.07 1309 reject_low 108 ALIGNMENT 0 YS2-7l03.q1k chr12 320 909 1941 1940 F 590 0.00 1309 reject_low 117 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 1982 1981 F 568 0.00 1309 reject_low 27 ALIGNMENT 0 YS2-7l03.q1k chr09 218 909 2382 2381 F 692 0.00 1309 reject_low 257 ALIGNMENT 84 YS2-7l03.q1k chr14 128 341 1569 1782 F 214 80.84 1309 reject_low 177 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 2270 2269 F 568 0.00 1309 reject_low 77 ALIGNMENT 0 YS2-7l03.q1k chr02 62 276 1486 1485 F 215 0.00 1309 reject_low 295 ALIGNMENT 82 YS2-7l03.p1k chr09 859 1000 439013 439147 F 142 92.25 1423 reject_low 23 ALIGNMENT 143 YS2-7l03.q1k chr12 38 341 1804 2107 F 304 83.55 1309 reject_low 85 ALIGNMENT 0 YS2-7l03.q1k chr04 909 270 1530065 1530064 C 640 0.00 1309 reject_low 108 ALIGNMENT 120 YS2-7l03.q1k chr08 341 59 560561 560843 C 283 81.98 1309 reject_low 127 ALIGNMENT 0 YS2-7l03.q1k chr08 342 909 1823 1822 F 568 0.00 1309 reject_low 255 ALIGNMENT 53 YS2-7l03.q1k chr12 136 38 1069627 1069725 C 99 85.86 1309 reject_low 229 ALIGNMENT 101 YS2-7l03.q1k chr06 168 341 892 1065 F 174 87.36 1309 reject_low 161 ALIGNMENT 54 YS2-7l03.q1k chr12 341 240 1076589 1076690 C 102 86.27 1309 reject_low 276 ALIGNMENT 155 YS2-7l03.q1k chr12 341 38 1076373 1076676 C 304 84.87 1309 reject_low 67 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 1855 1854 F 568 0.00 1309 reject_low 211 ALIGNMENT 0 YS2-7l03.p1k chr09 62 858 439013 439012 F 797 0.00 1423 reject_low 23 ALIGNMENT 0 YS2-7l03.q1k chr07 909 342 1089295 1089294 C 568 0.00 1309 reject_low 273 ALIGNMENT 69 YS2-7l03.q1k chr15 319 180 1089503 1089642 C 140 84.29 1309 reject_low 239 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 2035 2034 F 568 0.00 1309 reject_low 84 ALIGNMENT 0 YS2-7l03.q1k chr13 62 179 1678 1677 F 118 0.00 1309 reject_low 237 ALIGNMENT 63 YS2-7l03.q1k chr08 240 341 1650 1751 F 102 89.22 1309 reject_low 245 ALIGNMENT 143 YS2-7l03.q1k chr02 38 341 1823 2126 F 304 83.55 1309 reject_low 82 ALIGNMENT 31 YS2-7l03.q1k chr12 277 341 1683 1747 F 65 84.62 1309 reject_low 310 ALIGNMENT 0 YS2-7l03.q1k chr15 909 342 1089374 1089373 C 568 0.00 1309 reject_low 147 ALIGNMENT 0 YS2-7l03.q1k chr16 62 276 1483 1482 F 215 0.00 1309 reject_low 305 ALIGNMENT 0 YS2-7l03.q1k chr16 909 126 945963 945962 C 784 0.00 1309 reject_low 210 ALIGNMENT 0 YS2-7l03.q1k chr09 342 909 2110 2109 F 568 0.00 1309 reject_low 222 ALIGNMENT 886 YS2-7l03.q1k chr16 38 1177 1604 2760 F 1140 93.16 1309 reject_low 6 ALIGNMENT 79 YS2-7l03.q1k chr14 92 341 1569 1818 F 250 78.40 1309 reject_low 192 ALIGNMENT 0 YS2-7l03.q1k chr16 342 909 1691 1690 F 568 0.00 1309 reject_low 179 ALIGNMENT 56 YS2-7l03.q1k chr12 38 136 2092 2190 F 99 86.87 1309 reject_low 322 ALIGNMENT 0 YS2-7l03.q1k chr12 62 91 1678 1677 F 30 0.00 1309 reject_low 160 ALIGNMENT 0 YS2-7l03.q1k chr07 909 306 1088971 1088970 C 604 0.00 1309 reject_low 94 ALIGNMENT 0 YS2-7l03.q1k chr15 909 270 1089230 1089229 C 640 0.00 1309 reject_low 110 ALIGNMENT 0 YS2-7l03.q1k chr12 62 215 1694 1693 F 154 0.00 1309 reject_low 213 ALIGNMENT 0 YS2-7l03.q1k chr05 127 62 575323 575322 C 66 0.00 1309 reject_low 172 ALIGNMENT 0 YS2-7l03.q1k chr14 62 127 1569 1568 F 66 0.00 1309 reject_low 177 ALIGNMENT 0 YS2-7l03.q1k chr05 218 909 2058 2057 F 692 0.00 1309 reject_low 166 ALIGNMENT 0 YS2-7l03.q1k chr05 909 234 574894 574893 C 676 0.00 1309 reject_low 132 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 1658 1657 F 568 0.00 1309 reject_low 221 ALIGNMENT 0 YS2-7l03.q1k chr04 96 62 1530453 1530452 C 35 0.00 1309 reject_low 171 ALIGNMENT 174 YS2-7l03.q1k chr10 38 339 1934 2235 F 302 87.09 1309 reject_low 30 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 1838 1837 F 568 0.00 1309 reject_low 123 ALIGNMENT 0 YS2-7l03.q1k chr07 909 320 1089245 1089244 C 590 0.00 1309 reject_low 234 ALIGNMENT 0 YS2-7l03.q1k chr16 342 909 1547 1546 F 568 0.00 1309 reject_low 305 ALIGNMENT 0 YS2-7l03.q1k chr12 306 909 2215 2214 F 604 0.00 1309 reject_low 95 ALIGNMENT 54 YS2-7l03.q1k chr02 240 341 1485 1586 F 102 86.27 1309 reject_low 271 ALIGNMENT 69 YS2-7l03.q1k chr12 180 319 7337 7476 F 140 84.29 1309 reject_low 320 ALIGNMENT 0 YS2-7l03.q1k chr05 342 909 1858 1857 F 568 0.00 1309 reject_low 129 ALIGNMENT 0 YS2-7l03.q1k chr13 137 909 2066 2065 F 773 0.00 1309 reject_low 217 ALIGNMENT 63 YS2-7l03.q1k chr16 216 319 1494 1597 F 104 88.46 1309 reject_low 254 ALIGNMENT 0 YS2-7l03.q1k chr09 342 909 2146 2145 F 568 0.00 1309 reject_low 195 ALIGNMENT 79 YS2-7l03.q1k chr16 92 341 1478 1727 F 250 78.40 1309 reject_low 194 ALIGNMENT 126 YS2-7l03.q1k chr02 59 341 1484 1766 F 283 82.69 1309 reject_low 124 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 1927 1926 F 568 0.00 1309 reject_low 160 ALIGNMENT 0 YS2-7l03.q1k chr16 274 62 946425 946424 C 213 0.00 1309 reject_low 307 ALIGNMENT 108 YS2-7l03.q1k chr05 341 59 575037 575319 C 283 80.57 1309 reject_low 140 ALIGNMENT 0 YS2-7l03.q1k chr15 239 62 1089655 1089654 C 178 0.00 1309 reject_low 279 ALIGNMENT 0 YS2-7l03.q1k chr12 62 179 1694 1693 F 118 0.00 1309 reject_low 211 ALIGNMENT 0 YS2-7l03.q1k chr16 342 909 1727 1726 F 568 0.00 1309 reject_low 194 ALIGNMENT 161 YS2-7l03.q1k chr13 38 341 1716 2019 F 304 85.53 1309 reject_low 43 ALIGNMENT 0 YS2-7l03.q1k chr10 342 909 2165 2164 F 568 0.00 1309 reject_low 149 ALIGNMENT 0 YS2-7l03.q1k chr13 62 91 1662 1661 F 30 0.00 1309 reject_low 191 ALIGNMENT 58 YS2-7l03.q1k chr04 125 38 1530064 1530151 C 88 89.77 1309 reject_low 201 ALIGNMENT 0 YS2-7l03.q1k chr05 342 909 2002 2001 F 568 0.00 1309 reject_low 79 ALIGNMENT 0 YS2-7l03.q1k chr05 909 342 574966 574965 C 568 0.00 1309 reject_low 38 ALIGNMENT 98 YS2-7l03.q1k chr04 233 38 1530064 1530259 C 196 84.18 1309 reject_low 150 ALIGNMENT 0 YS2-7l03.q1k chr14 234 909 1998 1997 F 676 0.00 1309 reject_low 136 ALIGNMENT 0 YS2-7l03.p1k chr03 579 62 1430 1429 C 518 0.00 1423 reject_low 20 ALIGNMENT 0 YS2-7l03.q1k chr08 909 342 560778 560777 C 568 0.00 1309 reject_low 300 ALIGNMENT 0 YS2-7l03.q1k chr04 276 62 1530453 1530452 C 215 0.00 1309 reject_low 296 ALIGNMENT 0 YS2-7l03.q1k chr12 127 126 1070032 1076264 C 2 0.00 1309 reject_low 318 ALIGNMENT 0 YS2-7l03.q1k chr13 342 909 1767 1766 F 568 0.00 1309 reject_low 277 ALIGNMENT 0 YS2-7l03.q1k chr05 909 342 575218 575217 C 568 0.00 1309 reject_low 272 ALIGNMENT 0 YS2-7l03.q1k chr13 62 239 1666 1665 F 178 0.00 1309 reject_low 277 ALIGNMENT 140 YS2-7l03.q1k chr02 38 341 2039 2342 F 304 83.22 1309 reject_low 103 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1069747 1069746 C 568 0.00 1309 reject_low 143 ALIGNMENT 0 YS2-7l03.q1k chr05 909 270 574894 574893 C 640 0.00 1309 reject_low 86 ALIGNMENT 146 YS2-7l03.q1k chr05 38 341 1699 2002 F 304 83.88 1309 reject_low 79 ALIGNMENT 69 YS2-7l03.q1k chr08 319 180 560691 560830 C 140 84.29 1309 reject_low 235 ALIGNMENT 0 YS2-7l03.q1k chr16 215 62 946412 946411 C 154 0.00 1309 reject_low 289 ALIGNMENT 0 YS2-7l03.q1k chr06 91 144 923 904 F 54 0.00 1309 reject_low 319 ALIGNMENT 108 YS2-7l03.q1k chr12 59 341 7324 7606 F 283 80.57 1309 reject_low 142 ALIGNMENT 0 YS2-7l03.q1k chr15 91 62 1089659 1089658 C 30 0.00 1309 reject_low 193 ALIGNMENT 0 YS2-7l03.q1k chr08 909 342 560634 560633 C 568 0.00 1309 reject_low 174 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 1586 1585 F 568 0.00 1309 reject_low 271 ALIGNMENT 145 YS2-7l03.q1k chr04 341 61 1530172 1530452 C 281 85.05 1309 reject_low 101 ALIGNMENT 70 YS2-7l03.q1k chr09 145 341 2022 2218 F 197 79.70 1309 reject_low 223 ALIGNMENT 200 YS2-7l03.q1k chr02 38 341 1715 2018 F 304 89.80 1309 reject_low 28 ALIGNMENT 0 YS2-7l03.q1k chr06 290 909 1265 1264 F 620 0.00 1309 reject_low 167 ALIGNMENT 48 YS2-7l03.q1k chr13 38 197 1932 2091 F 160 77.50 1309 reject_low 263 ALIGNMENT 31 YS2-7l03.q1k chr10 277 341 1921 1985 F 65 84.62 1309 reject_low 309 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 1766 1765 F 568 0.00 1309 reject_low 124 ALIGNMENT 0 YS2-7l03.q1k chr06 127 909 1246 1245 F 783 0.00 1309 reject_low 292 ALIGNMENT 886 YS2-7l03.q1k chr05 1177 38 574040 575196 C 1140 93.25 1309 reject_low 1 ALIGNMENT 0 YS2-7l03.q1k chr08 909 306 560418 560417 C 604 0.00 1309 reject_low 73 ALIGNMENT 0 YS2-7l03.q1k chr16 909 342 946359 946358 C 568 0.00 1309 reject_low 307 ALIGNMENT 50 YS2-7l03.q1k chr06 38 217 1086 1265 F 180 76.67 1309 reject_low 256 ALIGNMENT 79 YS2-7l03.q1k chr15 341 92 1089409 1089658 C 250 78.40 1309 reject_low 193 ALIGNMENT 48 YS2-7l03.q1k chr12 38 197 2056 2215 F 160 77.50 1309 reject_low 324 ALIGNMENT 0 YS2-7l03.q1k chr05 290 909 2058 2057 F 620 0.00 1309 reject_low 197 ALIGNMENT 92 YS2-7l03.q1k chr02 38 233 2219 2414 F 196 83.16 1309 reject_low 156 ALIGNMENT 0 YS2-7l03.q1k chr05 127 909 2039 2038 F 783 0.00 1309 reject_low 291 ALIGNMENT 0 YS2-7l03.q1k chr15 909 198 1089230 1089229 C 712 0.00 1309 reject_low 270 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 2126 2125 F 568 0.00 1309 reject_low 82 ALIGNMENT 92 YS2-7l03.q1k chr08 233 38 560417 560612 C 196 83.16 1309 reject_low 157 ALIGNMENT 142 YS2-7l03.q1k chr05 305 38 574893 575160 C 268 85.45 1309 reject_low 93 ALIGNMENT 0 YS2-7l03.q1k chr04 240 62 1530453 1530452 C 179 0.00 1309 reject_low 288 ALIGNMENT 0 YS2-7l03.q1k chr08 909 270 560418 560417 C 640 0.00 1309 reject_low 60 ALIGNMENT 0 YS2-7l03.q1k chr10 342 909 2129 2128 F 568 0.00 1309 reject_low 159 ALIGNMENT 0 YS2-7l03.q1k chr12 179 62 1076679 1076678 C 118 0.00 1309 reject_low 236 ALIGNMENT 0 YS2-7l03.q1k chr13 234 909 2091 2090 F 676 0.00 1309 reject_low 135 ALIGNMENT 0 YS2-7l03.q1k chr05 317 909 1761 1760 F 593 0.00 1309 reject_low 121 ALIGNMENT 0 YS2-7l03.q1k chr08 909 320 560728 560727 C 590 0.00 1309 reject_low 249 ALIGNMENT 0 YS2-7l03.q1k chr10 62 197 1914 1913 F 136 0.00 1309 reject_low 199 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 7606 7605 F 568 0.00 1309 reject_low 142 ALIGNMENT 33 YS2-7l03.q1k chr16 341 275 946358 946424 C 67 85.07 1309 reject_low 307 ALIGNMENT 0 YS2-7l03.q1k chr12 126 179 2216 7336 F 54 0.00 1309 reject_low 320 ALIGNMENT 139 YS2-7l03.q1k chr16 269 38 945962 946193 C 232 87.50 1309 reject_low 92 ALIGNMENT 0 YS2-7l03.q1k chr16 62 91 1478 1477 F 30 0.00 1309 reject_low 194 ALIGNMENT 0 YS2-7l03.q1k chr15 909 342 1089554 1089553 C 568 0.00 1309 reject_low 279 ALIGNMENT 0 YS2-7l03.q1k chr05 909 306 574894 574893 C 604 0.00 1309 reject_low 93 ALIGNMENT 0 YS2-7l03.q1k chr10 110 909 2365 2364 F 800 0.00 1309 reject_low 284 ALIGNMENT 139 YS2-7l03.q1k chr13 38 269 1860 2091 F 232 87.50 1309 reject_low 89 ALIGNMENT 173 YS2-7l03.q1k chr16 341 38 946034 946337 C 304 86.84 1309 reject_low 31 ALIGNMENT 53 YS2-7l03.q1k chr12 136 38 1076290 1076388 C 99 85.86 1309 reject_low 323 ALIGNMENT 101 YS2-7l03.q1k chr13 38 233 1896 2091 F 196 84.69 1309 reject_low 135 ALIGNMENT 0 YS2-7l03.q1k chr08 909 234 560418 560417 C 676 0.00 1309 reject_low 157 ALIGNMENT 104 YS2-7l03.q1k chr10 54 341 1914 2201 F 288 79.86 1309 reject_low 154 ALIGNMENT 139 YS2-7l03.q1k chr15 305 38 1089229 1089496 C 268 85.07 1309 reject_low 107 ALIGNMENT 0 YS2-7l03.q1k chr08 62 215 1662 1661 F 154 0.00 1309 reject_low 225 ALIGNMENT 0 YS2-7l03.q1k chr04 909 320 1530375 1530374 C 590 0.00 1309 reject_low 288 ALIGNMENT 0 YS2-7l03.q1k chr04 909 198 1530065 1530064 C 712 0.00 1309 reject_low 268 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 1999 1998 F 568 0.00 1309 reject_low 52 ALIGNMENT 0 YS2-7l03.q1k chr12 909 320 1076576 1076575 C 590 0.00 1309 reject_low 250 ALIGNMENT 0 YS2-7l03.q1k chr08 909 342 560742 560741 C 568 0.00 1309 reject_low 274 ALIGNMENT 34 YS2-7l03.q1k chr16 277 341 1483 1547 F 65 86.15 1309 reject_low 305 ALIGNMENT 0 YS2-7l03.q1k chr12 62 239 1682 1681 F 178 0.00 1309 reject_low 275 ALIGNMENT 34 YS2-7l03.q1k chr02 277 341 1486 1550 F 65 86.15 1309 reject_low 295 ALIGNMENT 0 YS2-7l03.q1k chr10 340 909 2271 2270 F 570 0.00 1309 reject_low 29 ALIGNMENT 161 YS2-7l03.q1k chr02 39 341 2004 2306 F 303 85.48 1309 reject_low 49 ALIGNMENT 158 YS2-7l03.q1k chr12 341 38 1069674 1069977 C 304 85.20 1309 reject_low 54 ALIGNMENT 139 YS2-7l03.p1k chr07 1000 788 699 904 C 213 92.49 1423 reject_bad_break 0 ALIGNMENT 63 YS2-7l03.q1k chr12 319 216 1069912 1070015 C 104 88.46 1309|0,9 reject_low 316 ALIGNMENT 58 YS2-7l03.q1k chr14 38 125 1911 1998 F 88 89.77 1309 reject_low 207 ALIGNMENT 164 YS2-7l03.q1k chr12 38 341 1876 2179 F 304 85.86 1309 reject_low 36 ALIGNMENT 0 YS2-7l03.q1k chr05 909 342 575074 575073 C 568 0.00 1309 reject_low 186 ALIGNMENT 49 YS2-7l03.q1k chr16 341 216 946286 946411 C 126 80.95 1309 reject_low 289 ALIGNMENT 0 YS2-7l03.q1k chr12 320 909 7440 7439 F 590 0.00 1309 reject_low 315 ALIGNMENT 0 YS2-7l03.q1k chr12 270 276 2216 7325 F 7 0.00 1309 reject_low 313 ALIGNMENT 54 YS2-7l03.q1k chr16 240 341 1482 1583 F 102 86.27 1309 reject_low 280 ALIGNMENT 0 YS2-7l03.q1k chr04 909 342 1530245 1530244 C 568 0.00 1309 reject_low 259 ALIGNMENT 101 YS2-7l03.q1k chr16 38 233 1712 1907 F 196 84.69 1309 reject_low 137 ALIGNMENT 0 YS2-7l03.q1k chr16 909 320 946237 946236 C 590 0.00 1309 reject_low 164 ALIGNMENT 0 YS2-7l03.q1k chr04 204 62 1530453 1530452 C 143 0.00 1309 reject_low 267 ALIGNMENT 58 YS2-7l03.q1k chr12 38 125 7663 7750 F 88 89.77 1309 reject_low 204 ALIGNMENT 142 YS2-7l03.q1k chr07 305 38 1088970 1089237 C 268 85.45 1309 reject_low 94 ALIGNMENT 63 YS2-7l03.q1k chr02 216 319 1497 1600 F 104 88.46 1309 reject_low 246 ALIGNMENT 0 YS2-7l03.q1k chr08 909 137 560443 560442 C 773 0.00 1309 reject_low 243 ALIGNMENT 0 YS2-7l03.q1k chr09 340 909 2288 2287 F 570 0.00 1309 reject_low 35 ALIGNMENT 45 YS2-7l03.q1k chr15 197 38 1089229 1089388 C 160 76.88 1309 reject_low 270 ALIGNMENT 84 YS2-7l03.q1k chr16 128 341 1478 1691 F 214 80.84 1309 reject_low 179 ALIGNMENT 152 YS2-7l03.q1k chr02 38 341 1499 1802 F 304 84.54 1309 reject_low 74 ALIGNMENT 0 YS2-7l03.q1k chr15 909 342 1089446 1089445 C 568 0.00 1309 reject_low 178 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 7714 7713 F 568 0.00 1309 reject_low 42 ALIGNMENT 45 YS2-7l03.q1k chr12 197 38 1076265 1076424 C 160 76.88 1309 reject_low 325 ALIGNMENT 31 YS2-7l03.q1k chr05 277 341 1470 1534 F 65 84.62 1309 reject_low 308 ALIGNMENT 167 YS2-7l03.q1k chr16 341 38 945998 946301 C 304 86.18 1309 reject_low 34 ALIGNMENT 0 YS2-7l03.q1k chr15 215 62 1089643 1089642 C 154 0.00 1309 reject_low 253 ALIGNMENT 0 YS2-7l03.p1k chr05 62 579 566695 566694 F 518 0.00 1423 reject_low 1 ALIGNMENT 45 YS2-7l03.q1k chr04 197 38 1530064 1530223 C 160 76.88 1309 reject_low 268 ALIGNMENT 158 YS2-7l03.q1k chr12 341 38 1076301 1076604 C 304 85.20 1309 reject_low 55 ALIGNMENT 0 YS2-7l03.q1k chr09 342 909 2218 2217 F 568 0.00 1309 reject_low 223 ALIGNMENT 137 YS2-7l03.q1k chr12 59 319 1681 1941 F 261 85.44 1309 reject_low 117 ALIGNMENT 54 YS2-7l03.q1k chr12 341 240 1069926 1070027 C 102 86.27 1309 reject_low 323 ALIGNMENT 161 YS2-7l03.q1k chr16 38 341 1568 1871 F 304 85.53 1309 reject_low 48 ALIGNMENT 54 YS2-7l03.q1k chr15 341 240 1089553 1089654 C 102 86.27 1309 reject_low 279 ALIGNMENT 0 YS2-7l03.q1k chr12 127 62 1076695 1076694 C 66 0.00 1309 reject_low 175 ALIGNMENT 63 YS2-7l03.q1k chr07 319 216 1089280 1089383 C 104 88.46 1309 reject_low 248 ALIGNMENT 0 YS2-7l03.q1k chr04 909 306 1530065 1530064 C 604 0.00 1309 reject_low 104 ALIGNMENT 0 YS2-7l03.q1k chr04 909 342 1530137 1530136 C 568 0.00 1309 reject_low 51 ALIGNMENT 0 YS2-7l03.p1k chr11 578 62 665308 665307 C 517 0.00 1423 reject_low 22 ALIGNMENT 0 YS2-7l03.q1k chr16 342 909 1871 1870 F 568 0.00 1309 reject_low 48 ALIGNMENT 0 YS2-7l03.q1k chr02 62 127 1481 1480 F 66 0.00 1309 reject_low 185 ALIGNMENT 0 YS2-7l03.q1k chr08 909 342 560526 560525 C 568 0.00 1309 reject_low 78 ALIGNMENT 0 YS2-7l03.q1k chr16 909 198 945963 945962 C 712 0.00 1309 reject_low 266 ALIGNMENT 0 YS2-7l03.q1k chr08 137 909 1906 1905 F 773 0.00 1309 reject_low 228 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 1891 1890 F 568 0.00 1309 reject_low 196 ALIGNMENT 36 YS2-7l03.q1k chr05 65 126 1978 2039 F 62 87.10 1309 reject_low 291 ALIGNMENT 0 YS2-7l03.q1k chr16 909 270 945963 945962 C 640 0.00 1309 reject_low 92 ALIGNMENT 0 YS2-7l03.q1k chr09 62 228 1998 1997 F 167 0.00 1309 reject_low 222 ALIGNMENT 134 YS2-7l03.q1k chr05 38 341 1591 1894 F 304 82.57 1309 reject_low 116 ALIGNMENT 101 YS2-7l03.q1k chr12 38 233 7555 7750 F 196 84.69 1309 reject_low 134 ALIGNMENT 0 YS2-7l03.q1k chr15 909 342 1089302 1089301 C 568 0.00 1309 reject_low 58 ALIGNMENT 0 YS2-7l03.q1k chr05 320 909 1548 1547 F 590 0.00 1309 reject_low 285 ALIGNMENT 0 YS2-7l03.q1k chr06 62 91 888 887 F 30 0.00 1309 reject_low 61 ALIGNMENT 53 YS2-7l03.q1k chr04 136 38 1530089 1530187 C 99 85.86 1309 reject_low 227 ALIGNMENT 116 YS2-7l03.q1k chr05 38 341 1555 1858 F 304 80.59 1309 reject_low 129 ALIGNMENT 108 YS2-7l03.q1k chr12 341 59 1069746 1070028 C 283 80.57 1309 reject_low 143 ALIGNMENT 50 YS2-7l03.q1k chr02 38 136 2291 2389 F 99 84.85 1309 reject_low 242 ALIGNMENT 36 YS2-7l03.q1k chr10 65 126 2285 2346 F 62 87.10 1309 reject_low 294 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 1819 1818 F 568 0.00 1309 reject_low 213 ALIGNMENT 0 YS2-7l03.q1k chr14 270 909 1998 1997 F 640 0.00 1309 reject_low 90 ALIGNMENT 63 YS2-7l03.q1k chr14 216 319 1585 1688 F 104 88.46 1309 reject_low 252 ALIGNMENT 158 YS2-7l03.q1k chr15 341 38 1089265 1089568 C 304 85.20 1309 reject_low 57 ALIGNMENT 143 YS2-7l03.q1k chr12 38 341 1732 2035 F 304 83.55 1309 reject_low 84 ALIGNMENT 0 YS2-7l03.q1k chr13 342 909 1911 1910 F 568 0.00 1309 reject_low 191 ALIGNMENT 0 YS2-7l03.q1k chr05 909 198 574894 574893 C 712 0.00 1309 reject_low 260 ALIGNMENT 606 YS2-7l03.p1k chr07 764 37 895 1624 C 728 96.29 1423 reject_bad_break 0 ALIGNMENT 0 YS2-7l03.q1k chr05 179 62 575307 575306 C 118 0.00 1309 reject_low 233 ALIGNMENT 98 YS2-7l03.q1k chr12 233 38 1069602 1069797 C 196 84.18 1309 reject_low 151 ALIGNMENT 139 YS2-7l03.q1k chr14 38 269 1767 1998 F 232 87.50 1309 reject_low 90 ALIGNMENT 0 YS2-7l03.q1k chr07 127 62 1089400 1089399 C 66 0.00 1309 reject_low 173 ALIGNMENT 0 YS2-7l03.q1k chr10 342 909 2309 2308 F 568 0.00 1309 reject_low 76 ALIGNMENT 0 YS2-7l03.q1k chr12 239 62 1076691 1076690 C 178 0.00 1309 reject_low 276 ALIGNMENT 0 YS2-7l03.p1k chr07 787 765 905 894 C 23 0.00 1423 reject_bad_break 0 ALIGNMENT 109 YS2-7l03.q1k chr05 92 341 1465 1714 F 250 82.40 1309 reject_low 153 ALIGNMENT 0 YS2-7l03.q1k chr12 276 198 1070027 1076264 C 79 0.00 1309 reject_low 325 ALIGNMENT 0 YS2-7l03.q1k chr10 127 909 2346 2345 F 783 0.00 1309 reject_low 294 ALIGNMENT 54 YS2-7l03.q1k chr07 341 240 1089294 1089395 C 102 86.27 1309 reject_low 273 ALIGNMENT 0 YS2-7l03.q1k chr09 62 144 2022 2021 F 83 0.00 1309 reject_low 223 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 1946 1945 F 568 0.00 1309 reject_low 26 ALIGNMENT 63 YS2-7l03.q1k chr13 216 319 1678 1781 F 104 88.46 1309 reject_low 251 ALIGNMENT 0 YS2-7l03.q1k chr02 320 909 1600 1599 F 590 0.00 1309 reject_low 246 ALIGNMENT 182 YS2-7l03.p1k chr05 580 829 566695 566945 F 250 92.80 1423 reject_low 1 ALIGNMENT 0 YS2-7l03.q1k chr06 62 239 892 891 F 178 0.00 1309 reject_low 290 ALIGNMENT 56 YS2-7l03.q1k chr16 136 38 945987 946085 C 99 86.87 1309 reject_low 220 ALIGNMENT 0 YS2-7l03.q1k chr10 62 233 1914 1913 F 172 0.00 1309 reject_low 286 ALIGNMENT 0 YS2-7l03.q1k chr14 62 276 1574 1573 F 215 0.00 1309 reject_low 303 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1076302 1076301 C 568 0.00 1309 reject_low 55 ALIGNMENT 0 YS2-7l03.q1k chr15 909 306 1089230 1089229 C 604 0.00 1309 reject_low 107 ALIGNMENT 0 YS2-7l03.q1k chr12 342 909 2071 2070 F 568 0.00 1309 reject_low 131 ALIGNMENT 0 YS2-7l03.q1k chr14 126 909 1998 1997 F 784 0.00 1309 reject_low 207 ALIGNMENT 0 YS2-7l03.q1k chr05 909 342 575110 575109 C 568 0.00 1309 reject_low 172 ALIGNMENT 54 YS2-7l03.p1k chr15 830 923 1083837 1083930 F 94 87.23 1423 reject_low 3 ALIGNMENT 0 YS2-7l03.q1k chr16 909 342 946287 946286 C 568 0.00 1309 reject_low 289 ALIGNMENT 0 YS2-7l03.q1k chr06 218 909 1265 1264 F 692 0.00 1309 reject_low 256 ALIGNMENT 0 YS2-7l03.q1k chr16 909 342 946143 946142 C 568 0.00 1309 reject_low 119 ALIGNMENT 142 YS2-7l03.q1k chr16 305 38 945962 946229 C 268 85.45 1309 reject_low 100 ALIGNMENT 0 YS2-7l03.q1k chr13 342 909 2055 2054 F 568 0.00 1309 reject_low 44 ALIGNMENT 0 YS2-7l03.q1k chr12 215 62 1076679 1076678 C 154 0.00 1309 reject_low 250 ALIGNMENT 0 YS2-7l03.q1k chr13 342 909 2019 2018 F 568 0.00 1309 reject_low 43 ALIGNMENT 75 YS2-7l03.q1k chr05 180 319 1481 1620 F 140 85.71 1309 reject_low 212 ALIGNMENT 0 YS2-7l03.q1k chr16 251 62 946412 946411 C 190 0.00 1309 reject_low 287 ALIGNMENT 70 YS2-7l03.q1k chr08 216 341 1662 1787 F 126 86.51 1309 reject_low 225 ALIGNMENT 0 YS2-7l03.q1k chr02 137 909 2389 2388 F 773 0.00 1309 reject_low 242 ALIGNMENT 0 YS2-7l03.q1k chr09 62 156 1998 1997 F 95 0.00 1309 reject_low 198 ALIGNMENT 51 YS2-7l03.q1k chr10 234 341 1914 2021 F 108 84.26 1309 reject_low 286 ALIGNMENT 127 YS2-7l03.q1k chr16 341 95 946178 946424 C 247 85.02 1309 reject_low 125 ALIGNMENT 36 YS2-7l03.q1k chr09 65 126 2302 2363 F 62 87.10 1309 reject_low 293 ALIGNMENT 0 YS2-7l03.q1k chr08 342 909 1787 1786 F 568 0.00 1309 reject_low 225 ALIGNMENT 0 YS2-7l03.q1k chr10 340 909 2235 2234 F 570 0.00 1309 reject_low 30 ALIGNMENT 0 YS2-7l03.q1k chr12 234 909 7750 7749 F 676 0.00 1309 reject_low 134 ALIGNMENT 0 YS2-7l03.q1k chr10 342 909 2057 2056 F 568 0.00 1309 reject_low 199 ALIGNMENT 0 YS2-7l03.q1k chr09 254 909 2382 2381 F 656 0.00 1309 reject_low 169 ALIGNMENT 149 YS2-7l03.q1k chr08 341 38 560525 560828 C 304 84.21 1309 reject_low 78 ALIGNMENT 146 YS2-7l03.q1k chr16 341 38 946070 946373 C 304 83.88 1309 reject_low 80 ALIGNMENT 0 YS2-7l03.p1k chr08 62 579 7993 7992 F 518 0.00 1423 reject_low 312 ALIGNMENT 0 YS2-7l03.q1k chr02 270 909 2414 2413 F 640 0.00 1309 reject_low 59 ALIGNMENT 0 YS2-7l03.q1k chr16 270 909 1907 1906 F 640 0.00 1309 reject_low 91 ALIGNMENT 58 YS2-7l03.q1k chr12 125 38 1069602 1069689 C 88 89.77 1309 reject_low 205 ALIGNMENT 0 YS2-7l03.q1k chr12 909 320 1069913 1069912 C 590 0.00 1309 reject_low 316 ALIGNMENT 110 YS2-7l03.q1k chr12 38 341 1768 2071 F 304 79.93 1309 reject_low 131 ALIGNMENT 0 YS2-7l03.q1k chr10 290 909 2365 2364 F 620 0.00 1309 reject_low 183 ALIGNMENT 768 YS2-7l03.q1k chr09 38 1177 2059 3239 F 1140 90.00 1309 reject_low 17 ALIGNMENT 0 YS2-7l03.q1k chr14 137 909 1973 1972 F 773 0.00 1309 reject_low 218 ALIGNMENT 0 YS2-7l03.q1k chr08 62 239 1650 1649 F 178 0.00 1309 reject_low 245 ALIGNMENT 69 YS2-7l03.q1k chr13 180 319 1678 1817 F 140 84.29 1309 reject_low 237 ALIGNMENT 72 YS2-7l03.q1k chr09 229 341 1998 2110 F 113 89.38 1309 reject_low 222 ALIGNMENT 155 YS2-7l03.q1k chr05 341 38 575001 575304 C 304 84.87 1309 reject_low 63 ALIGNMENT 0 YS2-7l03.q1k chr08 62 127 1646 1645 F 66 0.00 1309 reject_low 200 ALIGNMENT 56 YS2-7l03.q1k chr13 38 136 1968 2066 F 99 86.87 1309 reject_low 217 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 1802 1801 F 568 0.00 1309 reject_low 74 ALIGNMENT 0 YS2-7l03.q1k chr16 909 342 946251 946250 C 568 0.00 1309 reject_low 226 ALIGNMENT 60 YS2-7l03.q1k chr08 180 341 1662 1823 F 162 80.25 1309 reject_low 255 ALIGNMENT 0 YS2-7l03.q1k chr16 198 909 1907 1906 F 712 0.00 1309 reject_low 265 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1069675 1069674 C 568 0.00 1309 reject_low 54 ALIGNMENT 58 YS2-7l03.q1k chr16 125 38 945962 946049 C 88 89.77 1309 reject_low 210 ALIGNMENT 0 YS2-7l03.q1k chr12 909 342 1069711 1069710 C 568 0.00 1309 reject_low 66 ALIGNMENT 56 YS2-7l03.q1k chr14 38 136 1875 1973 F 99 86.87 1309 reject_low 218 ALIGNMENT 79 YS2-7l03.q1k chr07 341 92 1089150 1089399 C 250 78.40 1309 reject_low 187 ALIGNMENT 200 YS2-7l03.q1k chr02 38 341 1679 1982 F 304 89.80 1309 reject_low 27 ALIGNMENT 70 YS2-7l03.q1k chr05 38 289 1807 2058 F 252 76.98 1309 reject_low 197 ALIGNMENT 0 YS2-7l03.q1k chr07 179 62 1089384 1089383 C 118 0.00 1309 reject_low 234 ALIGNMENT 0 YS2-7l03.q1k chr07 909 342 1089007 1089006 C 568 0.00 1309 reject_low 39 ALIGNMENT 63 YS2-7l03.q1k chr08 319 216 560727 560830 C 104 88.46 1309 reject_low 249 ALIGNMENT 0 YS2-7l03.q1k chr16 320 909 1633 1632 F 590 0.00 1309 reject_low 240 ALIGNMENT 0 YS2-7l03.q1k chr05 909 320 575168 575167 C 590 0.00 1309 reject_low 233 ALIGNMENT 0 YS2-7l03.q1k chr06 342 909 1209 1208 F 568 0.00 1309 reject_low 114 ALIGNMENT 0 YS2-7l03.q1k chr12 909 320 1069877 1069876 C 590 0.00 1309 reject_low 321 ALIGNMENT 34 YS2-7l03.q1k chr12 277 341 7326 7390 F 65 86.15 1309 reject_low 313,324 ALIGNMENT 139 YS2-7l03.q1k chr16 38 269 1676 1907 F 232 87.50 1309 reject_low 91 ALIGNMENT 56 YS2-7l03.q1k chr07 136 38 1088995 1089093 C 99 86.87 1309 reject_low 215 ALIGNMENT 137 YS2-7l03.q1k chr02 38 341 2075 2378 F 304 82.89 1309 reject_low 113 ALIGNMENT 0 YS2-7l03.q1k chr15 909 320 1089540 1089539 C 590 0.00 1309 reject_low 253 ALIGNMENT 131 YS2-7l03.q1k chr08 341 38 560453 560756 C 304 82.24 1309 reject_low 118 ALIGNMENT 0 YS2-7l03.q1k chr08 91 62 560847 560846 C 30 0.00 1309 reject_low 180 ALIGNMENT 152 YS2-7l03.q1k chr10 38 341 2006 2309 F 304 84.54 1309 reject_low 76 ALIGNMENT 0 YS2-7l03.q1k chr10 218 909 2365 2364 F 692 0.00 1309 reject_low 258 ALIGNMENT 0 YS2-7l03.q1k chr10 254 909 2365 2364 F 656 0.00 1309 reject_low 170 ALIGNMENT 692 YS2-7l03.q1k chr06 38 1177 942 2105 F 1140 88.33 1309 reject_low 19 ALIGNMENT 142 YS2-7l03.q1k chr12 38 305 7483 7750 F 268 85.45 1309 reject_low 96 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 2342 2341 F 568 0.00 1309 reject_low 103 ALIGNMENT 0 YS2-7l03.q1k chr12 276 270 1070027 1076264 C 7 0.00 1309 reject_low 314 ALIGNMENT 0 YS2-7l03.q1k chr16 342 909 1763 1762 F 568 0.00 1309 reject_low 148 ALIGNMENT 0 YS2-7l03.q1k chr05 62 239 1469 1468 F 178 0.00 1309 reject_low 285 ALIGNMENT 0 YS2-7l03.q1k chr09 340 909 2252 2251 F 570 0.00 1309 reject_low 111 ALIGNMENT 143 YS2-7l03.q1k chr02 38 341 1607 1910 F 304 83.55 1309 reject_low 81 ALIGNMENT 0 YS2-7l03.q1k chr06 342 909 1101 1100 F 568 0.00 1309 reject_low 319 ALIGNMENT 79 YS2-7l03.q1k chr13 92 341 1662 1911 F 250 78.40 1309 reject_low 191 ALIGNMENT 84 YS2-7l03.q1k chr12 128 341 7321 7534 F 214 80.84 1309 reject_low 317 ALIGNMENT 0 YS2-7l03.q1k chr15 909 342 1089590 1089589 C 568 0.00 1309 reject_low 304 ALIGNMENT 0 YS2-7l03.q1k chr15 909 342 1089410 1089409 C 568 0.00 1309 reject_low 193 ALIGNMENT 0 YS2-7l03.q1k chr08 62 179 1662 1661 F 118 0.00 1309 reject_low 255 ALIGNMENT 0 YS2-7l03.q1k chr08 909 320 560692 560691 C 590 0.00 1309 reject_low 235 ALIGNMENT 48 YS2-7l03.q1k chr16 197 38 945962 946121 C 160 77.50 1309 reject_low 266 ALIGNMENT 53 YS2-7l03.q1k chr08 38 136 1808 1906 F 99 85.86 1309 reject_low 228 ALIGNMENT 56 YS2-7l03.q1k chr16 38 136 1784 1882 F 99 86.87 1309 reject_low 219 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 2378 2377 F 568 0.00 1309 reject_low 113 ALIGNMENT 0 YS2-7l03.q1k chr13 62 215 1678 1677 F 154 0.00 1309 reject_low 251 ALIGNMENT 81 YS2-7l03.q1k chr02 128 341 1481 1694 F 214 80.37 1309 reject_low 185 ALIGNMENT 0 YS2-7l03.q1k chr08 276 62 560842 560841 C 215 0.00 1309 reject_low 300 ALIGNMENT 76 YS2-7l03.q1k chr09 38 253 2167 2382 F 216 79.17 1309 reject_low 169 ALIGNMENT 0 YS2-7l03.q1k chr05 320 909 1620 1619 F 590 0.00 1309 reject_low 212 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 2234 2233 F 568 0.00 1309 reject_low 33 ALIGNMENT 40 YS2-7l03.q1k chr09 39 109 2312 2382 F 71 85.92 1309 reject_low 283 ALIGNMENT 125 YS2-7l03.q1k chr02 38 341 1535 1838 F 304 81.58 1309 reject_low 123 ALIGNMENT 765 YS2-7l03.q1k chr10 38 1177 2042 3222 F 1140 89.91 1309 reject_low 18 ALIGNMENT 69 YS2-7l03.q1k chr07 319 180 1089244 1089383 C 140 84.29 1309 reject_low 234 ALIGNMENT 133 YS2-7l03.q1k chr16 341 61 946142 946422 C 281 83.63 1309 reject_low 119 ALIGNMENT 108 YS2-7l03.q1k chr13 59 341 1665 1947 F 283 80.57 1309 reject_low 145 ALIGNMENT 116 YS2-7l03.q1k chr10 162 341 1914 2093 F 180 89.44 1309 reject_low 139 ALIGNMENT 0 YS2-7l03.q1k chr07 909 342 1089043 1089042 C 568 0.00 1309 reject_low 40 ALIGNMENT 0 YS2-7l03.q1k chr12 276 62 1076690 1076689 C 215 0.00 1309 reject_low 301 ALIGNMENT 0 YS2-7l03.q1k chr05 909 342 575002 575001 C 568 0.00 1309 reject_low 63 ALIGNMENT 161 YS2-7l03.q1k chr14 38 341 1659 1962 F 304 85.53 1309 reject_low 46 ALIGNMENT 222 YS2-7l03.q1k chr05 38 339 1663 1964 F 302 92.38 1309 reject_low 25 ALIGNMENT 0 YS2-7l03.q1k chr02 342 909 2162 2161 F 568 0.00 1309 reject_low 120 ALIGNMENT 50 YS2-7l04.q1k chr07 31 80 747948 747997 F 50 100.00 106 accept 0 ALIGNMENT 999 YS2-7l04.p1k chr07 1162 27 749693 750836 C 1136 96.57 1354 accept 0 ALIGNMENT 961 YS2-7l05.q1k chr16 39 1177 308202 309362 F 1139 95.26 1325 accept 0 ALIGNMENT 981 YS2-7l05.p1k chr16 1169 30 312545 313698 C 1140 96.93 1377 accept 0 ALIGNMENT 707 YS2-7l06.p1k chr02 168 1046 3034 3915 F 879 93.74 1392 ambiguous_tel 4 ALIGNMENT 707 YS2-7l06.p1k chr08 1046 168 558916 559797 C 879 93.74 1392 ambiguous_tel 5 ALIGNMENT 701 YS2-7l06.p1k chr04 1046 168 1528565 1529446 C 879 93.52 1392 ambiguous_tel 9 ALIGNMENT 701 YS2-7l06.p1k chr13 168 1046 2709 3590 F 879 93.52 1392 ambiguous_tel 14 ALIGNMENT 725 YS2-7l06.p1k chr10 168 1046 2987 3868 F 879 94.43 1392 ambiguous_tel 0 ALIGNMENT 701 YS2-7l06.p1k chr08 168 1046 2565 3446 F 879 93.52 1392 ambiguous_tel 12 ALIGNMENT 701 YS2-7l06.p1k chr16 168 1046 2525 3406 F 879 93.52 1392 ambiguous_tel 17 ALIGNMENT 716 YS2-7l06.p1k chr05 168 1046 2680 3561 F 879 94.08 1392 ambiguous_tel 2 ALIGNMENT 722 YS2-7l06.p1k chr09 168 1046 3004 3885 F 879 94.31 1392 ambiguous_tel 1 ALIGNMENT 704 YS2-7l06.p1k chr12 168 1046 8368 9249 F 879 93.63 1392 ambiguous_tel 7 ALIGNMENT 701 YS2-7l06.p1k chr05 1046 168 573394 574275 C 879 93.52 1392 ambiguous_tel 10 ALIGNMENT 701 YS2-7l06.p1k chr12 1046 168 1074766 1075647 C 879 93.52 1392 ambiguous_tel 13 ALIGNMENT 701 YS2-7l06.p1k chr07 1046 168 1087471 1088352 C 879 93.52 1392 ambiguous_tel 11 ALIGNMENT 701 YS2-7l06.p1k chr15 1046 168 1087730 1088611 C 879 93.52 1392 ambiguous_tel 16 ALIGNMENT 698 YS2-7l06.p1k chr12 1046 168 1068103 1068984 C 879 93.40 1392 ambiguous_tel 18 ALIGNMENT 701 YS2-7l06.p1k chr14 168 1046 2616 3497 F 879 93.52 1392 ambiguous_tel 15 ALIGNMENT 704 YS2-7l06.p1k chr12 168 1046 2833 3714 F 879 93.63 1392 ambiguous_tel 6 ALIGNMENT 704 YS2-7l06.p1k chr16 1046 168 944463 945344 C 879 93.63 1392 ambiguous_tel 8 ALIGNMENT 713 YS2-7l06.p1k chr06 168 1046 1870 2751 F 879 93.97 1392 ambiguous_tel 3 ALIGNMENT 0 YS2-7l08.p1k chr13 248 230 815872 815871 C 19 0.00 248 accept_chi 0 ALIGNMENT 190 YS2-7l08.p1k chr13 229 28 815871 816074 C 202 99.01 248 accept_chi 0 ALIGNMENT 50 YS2-7l08.q1k chr13 36 88 815871 815923 F 53 98.11 111 accept_chi 1 ALIGNMENT 951 YS2-7l09.p1k chr13 52 1181 802913 804055 F 1130 96.11 1367 accept 0 ALIGNMENT 963 YS2-7l09.q1k chr13 1191 38 803217 804386 C 1154 95.41 1359 accept 0 ALIGNMENT 0 YS2-7l10.p1k chr01 442 62 204731 204730 C 381 0.00 1282 reject_low 34 ALIGNMENT 0 YS2-7l10.p1k chr08 732 676 539569 539568 C 57 0.00 1282 reject_low 25 ALIGNMENT 0 YS2-7l10.p1k chr08 425 313 526881 527440 C 113 0.00 1282 reject_low 12 ALIGNMENT 202 YS2-7l10.p1k chr08 804 561 527042 527285 C 244 94.67 1282 reject_low 38 ALIGNMENT 138 YS2-7l10.p1k chr08 672 443 526229 526458 C 230 86.96 1282 reject_low 41 ALIGNMENT 152 YS2-7l10.p1k chr01 801 426 205452 205827 C 376 81.12 1282 reject_low 40 ALIGNMENT 0 YS2-7l10.p1k chr01 712 62 219055 219054 C 651 0.00 1282 reject_low 9 ALIGNMENT 94 YS2-7l10.p1k chr01 443 801 25958 26316 F 359 76.88 1282 reject_low 44 ALIGNMENT 0 YS2-7l10.p1k chr08 732 541 539569 539568 C 192 0.00 1282 ambiguous_tel 1 ALIGNMENT 148 YS2-7l10.p1k chr01 826 561 206372 206637 C 266 85.71 1282 reject_low 39 ALIGNMENT 272 YS2-7l10.p1k chr08 804 443 526772 527133 C 362 91.99 1282 reject_low 16 ALIGNMENT 0 YS2-7l10.p1k chr01 62 695 25401 25400 F 634 0.00 1282 reject_low 28 ALIGNMENT 58 YS2-7l10.p1k chr08 537 443 526229 526323 C 95 87.37 1282 reject_low 31 ALIGNMENT 82 YS2-7l10.p1k chr01 801 443 204912 205270 C 359 75.77 1282 reject_low 17 ALIGNMENT 59 YS2-7l10.p1k chr01 443 654 26228 26439 F 212 77.36 1282 reject_low 29 ALIGNMENT 0 YS2-7l10.p1k chr01 442 62 205541 205540 C 381 0.00 1282 reject_low 14 ALIGNMENT 87 YS2-7l10.p1k chr01 801 443 205317 205675 C 359 76.32 1282 reject_low 15 ALIGNMENT 0 YS2-7l10.p1k chr08 732 673 526230 526229 C 60 0.00 1282 reject_low 41 ALIGNMENT 98 YS2-7l10.p1k chr01 968 443 204070 204595 C 526 74.14 1282 ambiguous_tel 5 ALIGNMENT 0 YS2-7l10.p1k chr01 427 314 206096 206794 C 114 0.00 1282 reject_low 20 ALIGNMENT 315 YS2-7l10.p1k chr08 804 426 526502 526880 C 379 94.72 1282 reject_low 12 ALIGNMENT 383 YS2-7l10.p1k chr08 826 277 526885 527431 C 550 90.73 1282 manual 3 ALIGNMENT 0 YS2-7l10.p1k chr01 62 276 25255 25254 F 215 0.00 1282 ambiguous_tel 6 ALIGNMENT 0 YS2-7l10.p1k chr08 442 62 526324 526323 C 381 0.00 1282 reject_low 31 ALIGNMENT 0 YS2-7l10.p1k chr01 315 442 25203 25957 F 128 0.00 1282 reject_low 44 ALIGNMENT 0 YS2-7l10.p1k chr01 315 425 25203 25535 F 111 0.00 1282 reject_low 43 ALIGNMENT 84 YS2-7l10.p1k chr01 182 314 25073 25202 F 133 90.23 1282 reject_low 42,43,44,45,46,47 ALIGNMENT 63 YS2-7l10.p1k chr01 546 422 204219 204346 C 125 84.80 1282 reject_low 19 ALIGNMENT 0 YS2-7l10.p1k chr01 421 62 204347 204346 C 360 0.00 1282 reject_low 19 ALIGNMENT 0 YS2-7l10.p1k chr01 181 62 206927 206926 C 120 0.00 1282 reject_low 20,22,30,35,37,39,40 ALIGNMENT 0 YS2-7l10.p1k chr01 442 62 205271 205270 C 381 0.00 1282 reject_low 17 ALIGNMENT 64 YS2-7l10.p1k chr08 675 578 539568 539665 C 98 88.78 1282 reject_low 25 ALIGNMENT 85 YS2-7l10.p1k chr01 443 801 26093 26451 F 359 76.04 1282 reject_low 47 ALIGNMENT 59 YS2-7l10.p1k chr01 696 801 25401 25506 F 106 85.85 1282 reject_low 28 ALIGNMENT 0 YS2-7l10.p1k chr01 315 442 25203 25687 F 128 0.00 1282 reject_low 46 ALIGNMENT 0 YS2-7l10.p1k chr01 732 547 204220 204219 C 186 0.00 1282 reject_low 19 ALIGNMENT 89 YS2-7l10.p1k chr01 443 801 25688 26046 F 359 76.60 1282 reject_low 46 ALIGNMENT 94 YS2-7l10.p1k chr01 801 443 205047 205405 C 359 76.88 1282 reject_low 13 ALIGNMENT 254 YS2-7l10.p1k chr08 804 443 526637 526998 C 362 90.33 1282 reject_low 23 ALIGNMENT 0 YS2-7l10.p1k chr01 577 62 219055 219054 C 516 0.00 1282 reject_low 24 ALIGNMENT 318 YS2-7l10.p1k chr01 826 277 206237 206786 C 550 86.55 1282 ambiguous_tel 4 ALIGNMENT 0 YS2-7l10.p1k chr01 62 442 26228 26227 F 381 0.00 1282 reject_low 29 ALIGNMENT 476 YS2-7l10.p1k chr01 540 29 218957 219468 C 512 98.24 1282 ambiguous_tel 0 ALIGNMENT 0 YS2-7l10.p1k chr01 442 62 205136 205135 C 381 0.00 1282 reject_low 26 ALIGNMENT 98 YS2-7l10.p1k chr08 312 182 527441 527571 C 131 93.13 1282 manual 8 reject_low 11,12,16,23,38,41 ALIGNMENT 0 YS2-7l10.p1k chr08 442 313 526999 527440 C 130 0.00 1282 reject_low 23 ALIGNMENT 63 YS2-7l10.p1k chr01 801 443 204777 205135 C 359 74.09 1282 reject_low 26 ALIGNMENT 0 YS2-7l10.p1k chr08 442 313 526729 527440 C 130 0.00 1282 reject_low 11 ALIGNMENT 0 YS2-7l10.p1k chr08 695 62 527286 527285 C 634 0.00 1282 reject_low 18 ALIGNMENT 315 YS2-7l10.p1k chr08 819 443 526352 526728 C 377 94.96 1282 reject_low 11 ALIGNMENT 0 YS2-7l10.p1k chr01 442 62 204461 204460 C 381 0.00 1282 reject_low 21 ALIGNMENT 0 YS2-7l10.p1k chr01 315 577 13038 13255 F 263 0.00 1282 reject_low 48 ALIGNMENT 0 YS2-7l10.p1k chr01 62 442 26363 26362 F 381 0.00 1282 reject_low 36 ALIGNMENT 0 YS2-7l10.p1k chr08 442 313 527134 527440 C 130 0.00 1282 reject_low 16 ALIGNMENT 64 YS2-7l10.p1k chr01 675 578 218957 219054 C 98 88.78 1282 reject_low 24 ALIGNMENT 0 YS2-7l10.p1k chr08 442 313 526594 527440 C 130 0.00 1282 manual 8 ALIGNMENT 0 YS2-7l10.p1k chr08 712 62 539666 539665 C 651 0.00 1282 reject_low 10 ALIGNMENT 0 YS2-7l10.p1k chr01 732 682 204220 204219 C 51 0.00 1282 reject_low 21 ALIGNMENT 49 YS2-7l10.q1k chr06 92 40 33768 33820 C 53 98.11 114 accept_chi 2 ALIGNMENT 0 YS2-7l10.p1k chr01 442 62 205406 205405 C 381 0.00 1282 reject_low 13 ALIGNMENT 198 YS2-7l10.p1k chr01 801 426 205587 205962 C 376 84.57 1282 reject_low 35 ALIGNMENT 64 YS2-7l10.p1k chr08 899 713 539481 539665 C 187 79.68 1282 reject_low 10 ALIGNMENT 198 YS2-7l10.p1k chr01 826 426 205967 206367 C 401 83.54 1282 reject_low 30 ALIGNMENT 0 YS2-7l10.p1k chr01 732 676 218958 218957 C 57 0.00 1282 reject_low 24 ALIGNMENT 0 YS2-7l10.p1k chr01 515 732 13327 13326 F 218 0.00 1282 ambiguous_tel 7 ALIGNMENT 0 YS2-7l10.p1k chr01 442 62 205001 205000 C 381 0.00 1282 reject_low 32 ALIGNMENT 0 YS2-7l10.p1k chr01 315 560 25203 25400 F 246 0.00 1282 reject_low 42 ALIGNMENT 40 YS2-7l10.p1k chr01 807 443 204366 204730 C 365 71.78 1282 reject_low 34 ALIGNMENT 55 YS2-7l10.p1k chr01 813 696 206520 206637 C 118 83.05 1282 reject_low 27 ALIGNMENT 0 YS2-7l10.p1k chr01 425 314 205828 206794 C 112 0.00 1282 reject_low 40 ALIGNMENT 48 YS2-7l10.p1k chr01 801 443 204642 205000 C 359 72.70 1282 reject_low 32 ALIGNMENT 34 YS2-7l10.p1k chr01 443 519 26363 26439 F 77 81.82 1282 reject_low 36 ALIGNMENT 45 YS2-7l10.p1k chr01 578 649 13256 13327 F 72 87.50 1282 reject_low 48 ALIGNMENT 0 YS2-7l10.p1k chr01 62 181 12908 12907 F 120 0.00 1282 reject_low 48 ALIGNMENT 0 YS2-7l10.p1k chr08 577 62 539666 539665 C 516 0.00 1282 reject_low 25 ALIGNMENT 0 YS2-7l10.p1k chr01 655 732 26439 26438 F 78 0.00 1282 reject_low 29 ALIGNMENT 290 YS2-7l10.p1k chr01 277 801 25255 25776 F 525 85.90 1282 ambiguous_tel 6 ALIGNMENT 0 YS2-7l10.p1k chr01 62 276 13090 13089 F 215 0.00 1282 ambiguous_tel 7 ALIGNMENT 0 YS2-7l10.p1k chr01 276 62 206787 206786 C 215 0.00 1282 ambiguous_tel 4 ALIGNMENT 265 YS2-7l10.p1k chr08 899 443 526139 526593 C 457 87.09 1282 manual 8 ALIGNMENT 213 YS2-7l10.p1k chr01 826 426 206102 206502 C 401 84.79 1282 reject_low 22 ALIGNMENT 0 YS2-7l10.p1k chr01 650 712 13328 13255 F 63 0.00 1282 reject_low 48 ALIGNMENT 47 YS2-7l10.p1k chr01 713 784 13256 13327 F 72 88.89 1282 reject_low 48 ALIGNMENT 0 YS2-7l10.p1k chr01 442 62 204596 204595 C 381 0.00 1282 ambiguous_tel 5 ALIGNMENT 0 YS2-7l10.p1k chr08 181 62 527572 527571 C 120 0.00 1282 manual 8 reject_low 11,12,16,23,38,41 ALIGNMENT 0 YS2-7l10.p1k chr08 732 538 526230 526229 C 195 0.00 1282 reject_low 31 ALIGNMENT 0 YS2-7l10.p1k chr01 520 732 26439 26438 F 213 0.00 1282 reject_low 36 ALIGNMENT 80 YS2-7l10.p1k chr08 804 696 527177 527285 C 109 91.74 1282 reject_low 18 ALIGNMENT 0 YS2-7l10.p1k chr01 425 314 205963 206794 C 112 0.00 1282 reject_low 35 ALIGNMENT 0 YS2-7l10.p1k chr08 442 313 526459 527440 C 130 0.00 1282 reject_low 41 ALIGNMENT 0 YS2-7l10.p1k chr01 442 62 205676 205675 C 381 0.00 1282 reject_low 15 ALIGNMENT 0 YS2-7l10.p1k chr01 442 62 204866 204865 C 381 0.00 1282 reject_low 33 ALIGNMENT 101 YS2-7l10.p1k chr01 313 182 206795 206926 C 132 93.94 1282 reject_low 20,22,30,35,37,39,40 ALIGNMENT 87 YS2-7l10.p1k chr01 807 443 205176 205540 C 365 76.16 1282 reject_low 14 ALIGNMENT 0 YS2-7l10.p1k chr01 560 314 206638 206794 C 247 0.00 1282 reject_low 39 ALIGNMENT 155 YS2-7l10.p1k chr01 426 801 25536 25911 F 376 81.38 1282 reject_low 43 ALIGNMENT 0 YS2-7l10.p1k chr01 425 314 206368 206794 C 112 0.00 1282 reject_low 30 ALIGNMENT 0 YS2-7l10.p1k chr01 315 442 25203 25822 F 128 0.00 1282 reject_low 45 ALIGNMENT 217 YS2-7l10.p1k chr01 826 428 205697 206095 C 399 85.21 1282 reject_low 20 ALIGNMENT 179 YS2-7l10.p1k chr01 813 426 205845 206232 C 388 82.47 1282 reject_low 37 ALIGNMENT 87 YS2-7l10.p1k chr01 182 314 12908 13037 F 133 90.98 1282 reject_low 48 ALIGNMENT 0 YS2-7l10.p1k chr01 425 314 206233 206794 C 112 0.00 1282 reject_low 37 ALIGNMENT 42 YS2-7l10.p1k chr01 807 443 204501 204865 C 365 72.05 1282 reject_low 33 ALIGNMENT 0 YS2-7l10.p1k chr08 560 313 527286 527440 C 248 0.00 1282 reject_low 38 ALIGNMENT 0 YS2-7l10.p1k chr01 425 314 206503 206794 C 112 0.00 1282 reject_low 22 ALIGNMENT 0 YS2-7l10.p1k chr08 276 62 527432 527431 C 215 0.00 1282 manual 3 ALIGNMENT 0 YS2-7l10.p1k chr01 62 181 25073 25072 F 120 0.00 1282 reject_low 42,43,44,45,46,47 ALIGNMENT 0 YS2-7l10.p1k chr01 315 442 25203 26092 F 128 0.00 1282 reject_low 47 ALIGNMENT 473 YS2-7l10.p1k chr08 540 29 539568 540079 C 512 98.05 1282 ambiguous_tel 1 ALIGNMENT 0 YS2-7l10.p1k chr01 732 541 218958 218957 C 192 0.00 1282 ambiguous_tel 0 ALIGNMENT 164 YS2-7l10.p1k chr01 277 514 13090 13327 F 238 90.76 1282 ambiguous_tel 7 ALIGNMENT 64 YS2-7l10.p1k chr01 899 713 218870 219054 C 187 79.68 1282 reject_low 9 ALIGNMENT 78 YS2-7l10.p1k chr01 681 443 204219 204460 C 239 78.24 1282 reject_low 21 ALIGNMENT 89 YS2-7l10.p1k chr01 443 807 25823 26187 F 365 76.44 1282 reject_low 45 ALIGNMENT 0 YS2-7l10.p1k chr01 695 62 206638 206637 C 634 0.00 1282 reject_low 27 ALIGNMENT 160 YS2-7l10.p1k chr01 561 826 25401 25666 F 266 87.22 1282 reject_low 42 ALIGNMENT 907 YS2-7l12.p1k chr14 68 1083 262651 263678 F 1016 97.44 1356 accept 0 ALIGNMENT 55 YS2-7l12.q1k chr14 88 34 267892 267946 C 55 100.00 113 accept 0 ALIGNMENT 740 YS2-7l13.p1k chr10 36 931 202320 203212 F 896 96.54 1213 ambiguous_trans 1 ALIGNMENT 728 YS2-7l13.p1k chr16 931 39 437364 438253 C 893 96.30 1213 ambiguous_trans 3 ALIGNMENT 974 YS2-7l13.q1k chr12 41 1170 780551 781687 F 1130 96.81 1351 accept 0 ALIGNMENT 728 YS2-7l13.p1k chr08 39 931 90391 91280 F 893 96.19 1213 ambiguous_trans 2 ALIGNMENT 0 YS2-7l14.p1k chr11 873 563 494990 494989 C 311 0.00 1391 reject_low 1 ALIGNMENT 54 YS2-7l14.p1k chr11 562 162 494989 495389 C 401 72.32 1391 reject_low 1 ALIGNMENT 0 YS2-7l14.p1k chr11 161 62 495390 495389 C 100 0.00 1391 reject_low 1 ALIGNMENT 1061 YS2-7l14.p1k chr10 1271 27 242358 243602 C 1245 95.98 1391 accept 0 ALIGNMENT 49 YS2-7l14.q1k chr10 30 80 240928 240978 F 51 100.00 106 accept 0 ALIGNMENT 808 YS2-7l15.p1k chr14 52 1221 519215 520395 F 1170 91.28 1360 reject_low 27 ALIGNMENT 0 YS2-7l15.p1k chr01 865 319 160260 160259 C 547 0.00 1360 reject_low 28 ALIGNMENT 985 YS2-7l15.q1k chr13 30 1173 374402 375539 F 1144 96.50 1367 ambiguous_trans 5 ALIGNMENT 1003 YS2-7l15.q1k chr04 30 1190 988421 989574 F 1161 96.64 1367 reject_low 18 ALIGNMENT 869 YS2-7l15.p1k chr04 1221 52 650183 651363 C 1170 92.99 1360 ambiguous_trans 8 ALIGNMENT 869 YS2-7l15.p1k chr04 1221 52 882984 884164 C 1170 92.99 1360 reject_low 15 ALIGNMENT 1036 YS2-7l15.q1k chr07 30 1190 563549 564702 F 1161 97.59 1367 reject_low 16 ALIGNMENT 1036 YS2-7l15.q1k chr04 30 1190 647199 648352 F 1161 97.59 1367 ambiguous_trans 8 ALIGNMENT 893 YS2-7l15.p1k chr16 31 1221 56482 57686 F 1191 93.12 1360 ambiguous_trans 10 ALIGNMENT 869 YS2-7l15.p1k chr01 1221 31 164929 166133 C 1191 92.53 1360 ambiguous_trans 11 ALIGNMENT 1024 YS2-7l15.q1k chr13 1173 30 187246 188383 C 1144 97.64 1367 ambiguous_trans 3 ALIGNMENT 899 YS2-7l15.p1k chr13 31 1221 196362 197566 F 1191 93.28 1360 ambiguous_trans 12 ALIGNMENT 1000 YS2-7l15.q1k chr07 1190 30 538830 539983 C 1161 96.55 1367 ambiguous_trans 7 ALIGNMENT 1009 YS2-7l15.q1k chr15 1190 30 597881 599034 C 1161 96.81 1367 ambiguous_trans 2 ALIGNMENT 954 YS2-7l15.p1k chr15 30 1221 594850 596050 F 1192 94.97 1360 ambiguous_trans 2 ALIGNMENT 994 YS2-7l15.q1k chr13 1173 30 199413 200550 C 1144 96.77 1367 ambiguous_trans 12 ALIGNMENT 992 YS2-7l15.p1k chr04 30 1221 1095791 1096997 F 1192 95.81 1360 ambiguous_trans 0 ALIGNMENT 59 YS2-7l15.p1k chr15 163 254 594668 594759 F 92 90.22 1360 reject_low 31 ALIGNMENT 1036 YS2-7l15.q1k chr16 1190 30 847477 848630 C 1161 97.59 1367 ambiguous_trans 1 ALIGNMENT 844 YS2-7l15.q1k chr13 30 1173 358704 359841 F 1144 92.40 1367 reject_low 22 ALIGNMENT 986 YS2-7l15.p1k chr05 1221 30 497181 498387 C 1192 95.64 1360 reject_low 23 ALIGNMENT 893 YS2-7l15.p1k chr05 1221 31 448082 449286 C 1191 93.12 1360 reject_low 13 ALIGNMENT 0 YS2-7l15.p1k chr14 319 865 525043 525042 F 547 0.00 1360 reject_low 29 ALIGNMENT 989 YS2-7l15.p1k chr16 30 1221 844437 845643 F 1192 95.72 1360 ambiguous_trans 1 ALIGNMENT 0 YS2-7l15.p1k chr05 163 865 449455 449454 F 703 0.00 1360 reject_low 30 ALIGNMENT 956 YS2-7l15.p1k chr10 30 1221 472406 473612 F 1192 94.80 1360 ambiguous_trans 4 ALIGNMENT 0 YS2-7l15.p1k chr15 62 162 594668 594667 F 101 0.00 1360 reject_low 31 ALIGNMENT 968 YS2-7l15.p1k chr15 30 1221 117731 118937 F 1192 95.13 1360 ambiguous_trans 6 ALIGNMENT 948 YS2-7l15.p1k chr02 30 1221 259605 260805 F 1192 94.80 1360 reject_low 26 ALIGNMENT 62 YS2-7l15.p1k chr05 52 162 449346 449455 F 111 88.29 1360 reject_low 30 ALIGNMENT 1001 YS2-7l15.q1k chr10 1190 32 475443 476594 C 1159 96.64 1367 ambiguous_trans 4 ALIGNMENT 1003 YS2-7l15.q1k chr12 30 1190 477680 478833 F 1161 96.64 1367 ambiguous_trans 9 ALIGNMENT 983 YS2-7l15.q1k chr04 32 1173 880002 881137 F 1142 96.50 1367 reject_low 15 ALIGNMENT 951 YS2-7l15.p1k chr13 30 1221 184199 185399 F 1192 94.88 1360 ambiguous_trans 3 ALIGNMENT 893 YS2-7l15.p1k chr12 1221 31 480664 481868 C 1191 93.12 1360 ambiguous_trans 9 ALIGNMENT 994 YS2-7l15.q1k chr15 1173 30 120784 121921 C 1144 96.77 1367 ambiguous_trans 6 ALIGNMENT 1003 YS2-7l15.q1k chr12 1190 30 653890 655043 C 1161 96.64 1367 reject_low 20 ALIGNMENT 1036 YS2-7l15.q1k chr04 1190 30 1098828 1099981 C 1161 97.59 1367 ambiguous_trans 0 ALIGNMENT 988 YS2-7l15.q1k chr10 1173 30 481043 482180 C 1144 96.59 1367 reject_low 21 ALIGNMENT 0 YS2-7l15.p1k chr15 255 865 594759 594758 F 611 0.00 1360 reject_low 31 ALIGNMENT 929 YS2-7l15.q1k chr16 32 1190 852333 853484 F 1159 94.56 1367 reject_low 14 ALIGNMENT 1016 YS2-7l15.q1k chr16 32 1190 806345 807496 F 1159 97.07 1367 reject_low 17 ALIGNMENT 987 YS2-7l15.p1k chr13 1183 30 377432 378592 C 1154 96.27 1360 ambiguous_trans 5 ALIGNMENT 986 YS2-7l15.p1k chr12 1221 30 219771 220977 C 1192 95.64 1360 reject_low 24 ALIGNMENT 994 YS2-7l15.q1k chr05 30 1173 445098 446235 F 1144 96.77 1367 reject_low 13 ALIGNMENT 932 YS2-7l15.p1k chr07 30 1221 535793 536999 F 1192 94.21 1360 ambiguous_trans 7 ALIGNMENT 1016 YS2-7l15.q1k chr01 32 1190 161946 163097 F 1159 97.07 1367 ambiguous_trans 11 ALIGNMENT 1003 YS2-7l15.q1k chr04 1190 30 1209756 1210909 C 1161 96.64 1367 reject_low 19 ALIGNMENT 956 YS2-7l15.p1k chr16 1221 30 855315 856521 C 1192 94.80 1360 reject_low 14 ALIGNMENT 148 YS2-7l15.p1k chr14 52 318 524781 525043 F 267 88.01 1360 reject_low 29 ALIGNMENT 210 YS2-7l15.p1k chr01 318 31 160259 160545 C 288 93.40 1360 reject_low 28 ALIGNMENT 957 YS2-7l15.p1k chr07 1221 30 822082 823282 C 1192 95.05 1360 reject_low 25 ALIGNMENT 1003 YS2-7l15.q1k chr16 1190 30 59517 60670 C 1161 96.64 1367 ambiguous_trans 10 ALIGNMENT 46 YS2-7l16.q1k chr02 96 36 137055 137113 C 61 93.44 119 accept 0 ALIGNMENT 905 YS2-7l16.p1k chr02 30 1093 131760 132842 F 1064 95.68 1335 accept 0 ALIGNMENT 941 YS2-7l19.q1k chr03 1201 33 19805 20972 C 1169 95.21 1354 accept 0 ALIGNMENT 847 YS2-7l19.p1k chr03 110 1123 16699 17723 F 1014 95.56 1317 accept 0 ALIGNMENT 163 YS2-7l21.p1k chr12 201 27 1075614 1075788 C 175 98.86 220 ambiguous_tel 1 ALIGNMENT 0 YS2-7l21.q1k chr06 257 217 1727 1726 C 41 0.00 257 reject_low 29 ALIGNMENT 0 YS2-7l21.p1k chr14 202 220 2649 2648 F 19 0.00 220 reject_low 8 ALIGNMENT 0 YS2-7l21.p1k chr13 202 220 2742 2741 F 19 0.00 220 reject_low 7 ALIGNMENT 0 YS2-7l21.q1k chr12 217 257 1075791 1075790 F 41 0.00 257 reject_low 23 ALIGNMENT 0 YS2-7l21.q1k chr16 257 217 2382 2381 C 41 0.00 257 reject_low 27 ALIGNMENT 163 YS2-7l21.p1k chr12 201 27 1068951 1069125 C 175 98.86 220 reject_low 6 ALIGNMENT 0 YS2-7l21.p1k chr07 220 202 1088320 1088319 C 19 0.00 220 reject_low 4 ALIGNMENT 0 YS2-7l21.q1k chr14 257 217 2473 2472 C 41 0.00 257 reject_low 25 ALIGNMENT 171 YS2-7l21.q1k chr12 43 216 1068955 1069128 F 174 100.00 257 ambiguous_tel 1 ALIGNMENT 160 YS2-7l21.q1k chr05 216 46 2536 2706 C 171 98.25 257 reject_low 35 ALIGNMENT 163 YS2-7l21.p1k chr16 201 27 945311 945485 C 175 98.86 220 reject_low 11 ALIGNMENT 0 YS2-7l21.p1k chr12 202 220 2866 2865 F 19 0.00 220 ambiguous_tel 0 ALIGNMENT 38 YS2-7l21.q1k vc_7 220 257 13525 13562 F 38 100.00 257 reject_low 37 ALIGNMENT 0 YS2-7l21.p1k chr16 220 202 945312 945311 C 19 0.00 220 reject_low 11 ALIGNMENT 163 YS2-7l21.p1k chr12 27 201 8227 8401 F 175 98.86 220 reject_low 5 ALIGNMENT 0 YS2-7l21.p1k chr05 220 202 574243 574242 C 19 0.00 220 reject_low 3 ALIGNMENT 0 YS2-7l21.p1k chr10 202 220 3020 3019 F 19 0.00 220 reject_low 15 ALIGNMENT 0 YS2-7l21.q1k chr09 257 217 2861 2860 C 41 0.00 257 reject_low 33 ALIGNMENT 171 YS2-7l21.q1k chr07 43 216 1088323 1088496 F 174 100.00 257 reject_low 21 ALIGNMENT 163 YS2-7l21.p1k chr04 201 27 1529413 1529587 C 175 98.86 220 reject_low 2 ALIGNMENT 157 YS2-7l21.p1k chr09 27 201 2863 3037 F 175 97.71 220 reject_low 14 ALIGNMENT 0 YS2-7l21.q1k chr08 257 217 2422 2421 C 41 0.00 257 reject_low 30 ALIGNMENT 156 YS2-7l21.p1k chr08 201 27 559764 559939 C 175 97.71 220 reject_low 17 ALIGNMENT 166 YS2-7l21.q1k chr09 216 46 2860 3030 C 171 99.42 257 reject_low 33 ALIGNMENT 0 YS2-7l21.q1k chr07 217 257 1088496 1088495 F 41 0.00 257 reject_low 21 ALIGNMENT 0 YS2-7l21.q1k chr08 217 257 559942 559941 F 41 0.00 257 reject_low 32 ALIGNMENT 169 YS2-7l21.q1k chr08 216 46 2421 2591 C 171 100.00 257 reject_low 30 ALIGNMENT 164 YS2-7l21.q1k chr08 43 216 559768 559942 F 174 98.85 257 reject_low 32 ALIGNMENT 0 YS2-7l21.p1k chr08 202 220 2598 2597 F 19 0.00 220 reject_low 13 ALIGNMENT 166 YS2-7l21.q1k chr10 216 46 2843 3013 C 171 99.42 257 reject_low 34 ALIGNMENT 0 YS2-7l21.q1k chr12 257 217 8225 8224 C 41 0.00 257 ambiguous_tel 0 ALIGNMENT 0 YS2-7l21.p1k chr15 220 202 1088579 1088578 C 19 0.00 220 reject_low 9 ALIGNMENT 0 YS2-7l21.p1k chr12 220 202 1075615 1075614 C 19 0.00 220 ambiguous_tel 1 ALIGNMENT 171 YS2-7l21.q1k chr13 216 43 2565 2738 C 174 100.00 257 reject_low 24 ALIGNMENT 0 YS2-7l21.p1k chr12 202 220 8401 8400 F 19 0.00 220 reject_low 5 ALIGNMENT 0 YS2-7l21.p1k chr12 220 202 1068952 1068951 C 19 0.00 220 reject_low 6 ALIGNMENT 171 YS2-7l21.q1k chr04 43 216 1529417 1529590 F 174 100.00 257 reject_low 19 ALIGNMENT 171 YS2-7l21.q1k chr12 216 43 8224 8397 C 174 100.00 257 ambiguous_tel 0 ALIGNMENT 163 YS2-7l21.p1k chr14 27 201 2475 2649 F 175 98.86 220 reject_low 8 ALIGNMENT 163 YS2-7l21.p1k chr16 27 201 2384 2558 F 175 98.86 220 reject_low 10 ALIGNMENT 0 YS2-7l21.q1k chr02 257 217 2890 2889 C 41 0.00 257 reject_low 31 ALIGNMENT 0 YS2-7l21.q1k vc_7 62 219 13525 13524 F 158 0.00 257 reject_low 37 ALIGNMENT 0 YS2-7l21.q1k chr04 217 257 1529590 1529589 F 41 0.00 257 reject_low 19 ALIGNMENT 0 YS2-7l21.q1k chr13 257 217 2566 2565 C 41 0.00 257 reject_low 24 ALIGNMENT 0 YS2-7l21.p1k chr09 202 220 3037 3036 F 19 0.00 220 reject_low 14 ALIGNMENT 0 YS2-7l21.p1k chr06 202 220 1903 1902 F 19 0.00 220 reject_low 12 ALIGNMENT 164 YS2-7l21.q1k chr02 216 43 2889 3063 C 174 98.85 257 reject_low 31 ALIGNMENT 0 YS2-7l21.q1k chr12 217 257 1069128 1069127 F 41 0.00 257 ambiguous_tel 1 ALIGNMENT 160 YS2-7l21.p1k chr08 27 201 2424 2598 F 175 98.29 220 reject_low 13 ALIGNMENT 163 YS2-7l21.p1k chr07 201 27 1088319 1088493 C 175 98.86 220 reject_low 4 ALIGNMENT 0 YS2-7l21.p1k chr16 202 220 2558 2557 F 19 0.00 220 reject_low 10 ALIGNMENT 0 YS2-7l21.p1k chr02 202 220 3067 3066 F 19 0.00 220 reject_low 16 ALIGNMENT 0 YS2-7l21.q1k chr16 217 257 945488 945487 F 41 0.00 257 reject_low 28 ALIGNMENT 0 YS2-7l21.q1k chr15 217 257 1088755 1088754 F 41 0.00 257 reject_low 26 ALIGNMENT 0 YS2-7l21.p1k chr08 220 202 559765 559764 C 19 0.00 220 reject_low 17 ALIGNMENT 41 YS2-7l21.q1k vc_1 257 217 2472 2512 C 41 100.00 257 reject_low 36 ALIGNMENT 0 YS2-7l21.q1k vc_1 216 62 2513 2512 C 155 0.00 257 reject_low 36 ALIGNMENT 151 YS2-7l21.p1k chr05 27 201 2539 2713 F 175 96.57 220 reject_low 18 ALIGNMENT 0 YS2-7l21.q1k chr05 217 257 574419 574418 F 41 0.00 257 reject_low 20 ALIGNMENT 0 YS2-7l21.p1k chr04 220 202 1529414 1529413 C 19 0.00 220 reject_low 2 ALIGNMENT 171 YS2-7l21.q1k chr05 43 216 574246 574419 F 174 100.00 257 reject_low 20 ALIGNMENT 0 YS2-7l21.p1k chr05 202 220 2713 2712 F 19 0.00 220 reject_low 18 ALIGNMENT 163 YS2-7l21.p1k chr15 201 27 1088578 1088752 C 175 98.86 220 reject_low 9 ALIGNMENT 0 YS2-7l21.q1k chr05 257 217 2537 2536 C 41 0.00 257 reject_low 35 ALIGNMENT 168 YS2-7l21.q1k chr06 216 43 1726 1899 C 174 99.43 257 reject_low 29 ALIGNMENT 160 YS2-7l21.p1k chr06 27 201 1729 1903 F 175 98.29 220 reject_low 12 ALIGNMENT 163 YS2-7l21.p1k chr05 201 27 574242 574416 C 175 98.86 220 reject_low 3 ALIGNMENT 171 YS2-7l21.q1k chr15 43 216 1088582 1088755 F 174 100.00 257 reject_low 26 ALIGNMENT 171 YS2-7l21.q1k chr14 216 43 2472 2645 C 174 100.00 257 reject_low 25 ALIGNMENT 163 YS2-7l21.p1k chr13 27 201 2568 2742 F 175 98.86 220 reject_low 7 ALIGNMENT 171 YS2-7l21.q1k chr16 216 43 2381 2554 C 174 100.00 257 reject_low 27 ALIGNMENT 0 YS2-7l21.q1k chr10 257 217 2844 2843 C 41 0.00 257 reject_low 34 ALIGNMENT 171 YS2-7l21.q1k chr12 43 216 1075618 1075791 F 174 100.00 257 reject_low 23 ALIGNMENT 156 YS2-7l21.p1k chr02 27 201 2892 3067 F 175 97.71 220 reject_low 16 ALIGNMENT 171 YS2-7l21.q1k chr16 43 216 945315 945488 F 174 100.00 257 reject_low 28 ALIGNMENT 171 YS2-7l21.q1k chr12 216 43 2689 2862 C 174 100.00 257 reject_low 22 ALIGNMENT 0 YS2-7l21.q1k chr12 257 217 2690 2689 C 41 0.00 257 reject_low 22 ALIGNMENT 157 YS2-7l21.p1k chr10 27 201 2846 3020 F 175 97.71 220 reject_low 15 ALIGNMENT 163 YS2-7l21.p1k chr12 27 201 2692 2866 F 175 98.86 220 ambiguous_tel 0 ALIGNMENT 937 YS2-7l23.q1k chr12 1126 30 464467 465556 C 1097 95.90 1259 accept 0 ALIGNMENT 983 YS2-7l23.p1k chr12 73 1275 451420 452641 F 1203 94.93 1306 reject_low 1 ALIGNMENT 0 YS2-7l23.p1k chr12 62 426 489754 489753 F 365 0.00 1306 reject_low 2 ALIGNMENT 1001 YS2-7l23.p1k chr12 33 1275 460514 461778 F 1243 94.61 1306 accept 0 ALIGNMENT 669 YS2-7l23.p1k chr12 427 1210 489754 490540 F 784 95.79 1306 reject_low 2 ALIGNMENT 937 YS2-7l23.q1k chr12 1126 30 455330 456419 C 1097 95.90 1259 reject_low 1 ALIGNMENT 1021 YS2-7l24.p1k chr12 1149 29 1023061 1024189 C 1121 97.86 1270 accept 0 ALIGNMENT 43 YS2-7l24.q1k chr12 35 79 1019529 1019573 F 45 100.00 102 accept 0 ALIGNMENT 990 YS2-7m01.p1k chr12 1255 33 256441 257682 C 1223 94.93 1259 accept 0 ALIGNMENT 858 YS2-7m01.q1k chr12 27 1085 255136 256196 F 1059 94.71 1249 accept 0 ALIGNMENT 1020 YS2-7m02.p1k chr07 33 1157 272291 273426 F 1125 97.24 1289 accept 0 ALIGNMENT 711 YS2-7m02.q1k chr07 1114 40 274099 275179 C 1075 90.51 1277 accept 0 ALIGNMENT 375 YS2-7m03.q1k vc_4 419 1 5232 5654 C 419 96.90 686 reject_vc 3 ALIGNMENT 0 YS2-7m03.q1k vc_4 237 62 6340 6339 C 176 0.00 686 reject_low 10 ALIGNMENT 104 YS2-7m03.q1k vc_7 419 303 4583 4699 C 117 97.44 686 reject_vc 8 ALIGNMENT 276 YS2-7m03.q1k vc_1 1 296 2689 2986 F 296 97.97 686 reject_vc 4 ALIGNMENT 51 YS2-7m03.q1k vc_7 54 3 6360 6411 C 52 100.00 686|1,0 reject_vc 8 ALIGNMENT 156 YS2-7m03.q1k vc_4 306 677 1879 2248 F 372 83.06 686 reject_vc 7 ALIGNMENT 0 YS2-7m03.q1k vc_4 62 237 1548 1547 F 176 0.00 686 reject_vc 7 ALIGNMENT 431 YS2-7m03.q1k vc_7 612 1 1958 2569 C 612 91.34 686 reject_vc 2 ALIGNMENT 46 YS2-7m03.q1k vc_4 238 296 1548 1608 F 59 93.22 686 reject_vc 7 ALIGNMENT 0 YS2-7m03.q1k vc_4 237 62 113 112 C 176 0.00 686 reject_low 9 ALIGNMENT 276 YS2-7m03.q1k vc_3 1 296 2689 2986 F 296 97.97 686 reject_vc 6 ALIGNMENT 336 YS2-7m03.p1k chr04 62 458 606888 607287 F 397 97.73 477 accept 0 ALIGNMENT 0 YS2-7m03.q1k vc_4 297 305 1609 1878 F 9 0.00 686 reject_vc 7 ALIGNMENT 222 YS2-7m03.q1k vc_7 296 53 4927 5172 C 244 97.13 686|0,1 reject_vc 8 ALIGNMENT 0 YS2-7m03.q1k vc_7 302 297 4700 4926 C 6 0.00 686 reject_vc 8 ALIGNMENT 0 YS2-7m03.q1k vc_7 53 54 5172 6360 C 0 0.00 686 reject_vc 8 ALIGNMENT 46 YS2-7m03.q1k vc_4 296 238 52 112 C 59 93.22 686 reject_low 9 ALIGNMENT 46 YS2-7m03.q1k vc_4 296 238 6279 6339 C 59 93.22 686 reject_low 10 ALIGNMENT 0 YS2-7m03.p1k chr04 459 477 607287 607286 F 19 0.00 477 accept 0 ALIGNMENT 276 YS2-7m03.q1k vc_2 1 296 2322 2619 F 296 97.97 686 reject_vc 5 ALIGNMENT 439 YS2-7m03.q1k vc_5 1 677 2556 3232 F 677 89.51 686 reject_vc 1 ALIGNMENT 0 YS2-7m04.q1k vc_5 259 62 5064 5063 C 198 0.00 298 reject_low 5 ALIGNMENT 224 YS2-7m04.q1k chr13 30 257 668914 669141 F 228 100.00 298 accept_chi 0 ALIGNMENT 0 YS2-7m04.q1k vc_4 62 256 5830 5829 F 195 0.00 298 reject_low 4 ALIGNMENT 220 YS2-7m04.p1k chr13 288 55 668904 669136 C 234 98.72 299 accept_chi 1 ALIGNMENT 38 YS2-7m04.q1k vc_7 261 298 13525 13562 F 38 100.00 298 reject_low 6 ALIGNMENT 39 YS2-7m04.q1k vc_5 298 260 5025 5063 C 39 100.00 298 reject_low 5 ALIGNMENT 42 YS2-7m04.q1k vc_1 298 257 2472 2513 C 42 100.00 298 reject_low 2 ALIGNMENT 36 YS2-7m04.q1k vc_5 295 260 1 36 C 36 100.00 298 reject_low 7 ALIGNMENT 0 YS2-7m04.q1k vc_3 256 62 2514 2513 C 195 0.00 298 reject_low 3 ALIGNMENT 0 YS2-7m04.q1k vc_5 259 62 37 36 C 198 0.00 298 reject_low 7 ALIGNMENT 0 YS2-7m04.q1k vc_7 62 260 13525 13524 F 199 0.00 298 reject_low 6 ALIGNMENT 42 YS2-7m04.q1k vc_3 298 257 2472 2513 C 42 100.00 298 reject_low 3 ALIGNMENT 0 YS2-7m04.q1k chr13 258 298 669141 669140 F 41 0.00 298 accept_chi 0 ALIGNMENT 42 YS2-7m04.q1k vc_4 257 298 5830 5871 F 42 100.00 298 reject_low 4 ALIGNMENT 0 YS2-7m04.q1k vc_1 256 62 2514 2513 C 195 0.00 298 reject_low 2 ALIGNMENT 963 YS2-7m05.p1k chr16 56 1315 162752 164020 F 1260 93.41 1381 accept 0 ALIGNMENT 1028 YS2-7m05.q1k chr16 1178 38 166489 167637 C 1141 97.63 1320 accept 0 ALIGNMENT 1022 YS2-7m08.q1k chr16 30 1257 411195 412436 F 1228 95.20 1344 accept 0 ALIGNMENT 1028 YS2-7m08.p1k chr16 1220 27 411657 412866 C 1194 96.73 1353 accept 0 ALIGNMENT 0 YS2-7m09.q1k vc_4 924 923 5872 6353 F 0 0.00 1343 reject_low 9 ALIGNMENT 172 YS2-7m09.q1k vc_5 923 1218 2398 2709 F 296 87.50 1343 reject_low 5 ALIGNMENT 29 YS2-7m09.q1k vc_7 886 923 13525 13562 F 38 94.74 1343 reject_low 15 ALIGNMENT 0 YS2-7m09.q1k vc_3 882 62 2513 2512 C 821 0.00 1343 reject_low 13 ALIGNMENT 0 YS2-7m09.q1k vc_1 882 62 2513 2512 C 821 0.00 1343 reject_low 11 ALIGNMENT 0 YS2-7m09.q1k vc_7 922 62 2728 2727 C 861 0.00 1343 reject_low 6 ALIGNMENT 0 YS2-7m09.q1k vc_4 922 62 1535 1534 C 861 0.00 1343 reject_low 10 ALIGNMENT 0 YS2-7m09.q1k vc_2 882 62 2146 2145 C 821 0.00 1343 reject_low 12 ALIGNMENT 172 YS2-7m09.q1k vc_7 1218 923 2416 2727 C 296 87.50 1343 reject_low 6 ALIGNMENT 0 YS2-7m09.q1k vc_5 884 62 37 36 C 823 0.00 1343 reject_low 16 ALIGNMENT 0 YS2-7m09.q1k vc_5 62 922 2398 2397 F 861 0.00 1343 reject_low 5 ALIGNMENT 0 YS2-7m09.q1k vc_4 62 922 126 125 F 861 0.00 1343 reject_low 8 ALIGNMENT 0 YS2-7m09.q1k vc_7 62 885 13525 13524 F 824 0.00 1343 reject_low 15 ALIGNMENT 820 YS2-7m09.p1k chr04 905 66 504388 505228 C 840 99.52 905 accept_chi 1 ALIGNMENT 0 YS2-7m09.q1k vc_2 62 922 2164 2163 F 861 0.00 1343 reject_low 3 ALIGNMENT 826 YS2-7m09.q1k chr04 39 882 504388 505232 F 844 99.64 1343 accept_chi 0 ALIGNMENT 32 YS2-7m09.q1k vc_3 923 883 2472 2512 C 41 95.12 1343 reject_low 13 ALIGNMENT 56 YS2-7m09.q1k vc_4 1010 923 1446 1534 C 88 87.50 1343 reject_low 10 ALIGNMENT 0 YS2-7m09.q1k vc_5 884 62 5064 5063 C 823 0.00 1343 reject_low 14 ALIGNMENT 0 YS2-7m09.q1k vc_1 62 922 2531 2530 F 861 0.00 1343 reject_low 2 ALIGNMENT 165 YS2-7m09.q1k vc_4 1218 923 5499 5812 C 296 86.82 1343 reject_low 7 ALIGNMENT 172 YS2-7m09.q1k vc_3 923 1218 2531 2842 F 296 87.50 1343 reject_low 4 ALIGNMENT 32 YS2-7m09.q1k vc_4 883 923 5831 5871 F 41 95.12 1343 reject_low 9 ALIGNMENT 172 YS2-7m09.q1k vc_2 923 1218 2164 2475 F 296 87.50 1343 reject_low 3 ALIGNMENT 172 YS2-7m09.q1k vc_1 923 1218 2531 2842 F 296 87.50 1343 reject_low 2 ALIGNMENT 108 YS2-7m09.q1k vc_4 923 1081 126 288 F 159 89.31 1343 reject_low 8 ALIGNMENT 0 YS2-7m09.q1k vc_3 62 922 2531 2530 F 861 0.00 1343 reject_low 4 ALIGNMENT 32 YS2-7m09.q1k vc_2 923 883 2105 2145 C 41 95.12 1343 reject_low 12 ALIGNMENT 27 YS2-7m09.q1k vc_5 920 885 1 36 C 36 94.44 1343 reject_low 16 ALIGNMENT 0 YS2-7m09.q1k vc_4 922 62 5813 5812 C 861 0.00 1343 reject_low 7 ALIGNMENT 32 YS2-7m09.q1k vc_1 923 883 2472 2512 C 41 95.12 1343 reject_low 11 ALIGNMENT 108 YS2-7m09.q1k vc_4 923 1081 6353 6515 F 159 89.31 1343|1,0 reject_low 9 ALIGNMENT 30 YS2-7m09.q1k vc_5 923 885 5025 5063 C 39 94.87 1343 reject_low 14 ALIGNMENT 0 YS2-7m09.q1k vc_4 62 882 5831 5830 F 821 0.00 1343 reject_low 9 ALIGNMENT 38 YS2-7m10.q1k vc_7 371 408 13525 13562 F 38 100.00 408 reject_low 6 ALIGNMENT 323 YS2-7m10.q1k chr04 33 367 1488134 1488468 F 335 100.00 408 accept_chi 0 ALIGNMENT 0 YS2-7m10.q1k vc_7 62 370 13525 13524 F 309 0.00 408 reject_low 6 ALIGNMENT 0 YS2-7m10.q1k vc_5 369 62 37 36 C 308 0.00 408 reject_low 7 ALIGNMENT 41 YS2-7m10.q1k vc_1 408 368 2472 2512 C 41 100.00 408 reject_low 2 ALIGNMENT 0 YS2-7m10.p1k chr04 384 366 1488132 1488131 C 19 0.00 384 accept_chi 1 ALIGNMENT 321 YS2-7m10.p1k chr04 365 29 1488131 1488468 C 337 99.70 384 accept_chi 1 ALIGNMENT 36 YS2-7m10.q1k vc_5 405 370 1 36 C 36 100.00 408 reject_low 7 ALIGNMENT 0 YS2-7m10.q1k vc_1 367 62 2513 2512 C 306 0.00 408 reject_low 2 ALIGNMENT 41 YS2-7m10.q1k vc_3 408 368 2472 2512 C 41 100.00 408 reject_low 3 ALIGNMENT 0 YS2-7m10.q1k vc_5 369 62 5064 5063 C 308 0.00 408 reject_low 5 ALIGNMENT 0 YS2-7m10.q1k vc_3 367 62 2513 2512 C 306 0.00 408 reject_low 3 ALIGNMENT 41 YS2-7m10.q1k vc_4 368 408 5831 5871 F 41 100.00 408 reject_low 4 ALIGNMENT 39 YS2-7m10.q1k vc_5 408 370 5025 5063 C 39 100.00 408 reject_low 5 ALIGNMENT 0 YS2-7m10.q1k chr04 368 408 1488468 1488467 F 41 0.00 408 accept_chi 0 ALIGNMENT 0 YS2-7m10.q1k vc_4 62 367 5831 5830 F 306 0.00 408 reject_low 4 ALIGNMENT 39 YS2-7m13.q1k vc_5 221 183 5025 5063 C 39 100.00 221 reject_low 5 ALIGNMENT 0 YS2-7m13.q1k vc_3 179 62 2514 2513 C 118 0.00 221 reject_low 3 ALIGNMENT 42 YS2-7m13.q1k vc_4 180 221 5830 5871 F 42 100.00 221 reject_low 4 ALIGNMENT 42 YS2-7m13.q1k vc_1 221 180 2472 2513 C 42 100.00 221 reject_low 2 ALIGNMENT 0 YS2-7m13.q1k vc_7 62 183 13525 13524 F 122 0.00 221 reject_low 6 ALIGNMENT 154 YS2-7m13.q1k chr12 182 29 456016 456169 C 154 100.00 221 accept 0 ALIGNMENT 0 YS2-7m13.q1k vc_4 62 179 5830 5829 F 118 0.00 221 reject_low 4 ALIGNMENT 38 YS2-7m13.q1k vc_7 184 221 13525 13562 F 38 100.00 221 reject_low 6 ALIGNMENT 0 YS2-7m13.q1k chr12 221 183 456017 456016 C 39 0.00 221 accept 0 ALIGNMENT 42 YS2-7m13.q1k vc_3 221 180 2472 2513 C 42 100.00 221 reject_low 3 ALIGNMENT 0 YS2-7m13.q1k chr12 221 183 465154 465153 C 39 0.00 221 accept 1 ALIGNMENT 0 YS2-7m13.q1k vc_5 182 62 5064 5063 C 121 0.00 221 reject_low 5 ALIGNMENT 154 YS2-7m13.q1k chr12 182 29 465153 465306 C 154 100.00 221 accept 1 ALIGNMENT 36 YS2-7m13.q1k vc_5 218 183 1 36 C 36 100.00 221 reject_low 7 ALIGNMENT 0 YS2-7m13.q1k vc_5 182 62 37 36 C 121 0.00 221 reject_low 7 ALIGNMENT 0 YS2-7m13.q1k vc_1 179 62 2514 2513 C 118 0.00 221 reject_low 2 ALIGNMENT 273 YS2-7m14.p1k vc_5 427 1 4243 4669 C 427 88.76 811 reject_vc 3 ALIGNMENT 267 YS2-7m14.p1k vc_7 1 427 13918 14344 F 427 88.29 811 reject_vc 6 ALIGNMENT 273 YS2-7m14.p1k vc_3 427 1 1323 1749 C 427 88.76 811 reject_vc 2 ALIGNMENT 273 YS2-7m14.p1k vc_6 1 427 3712 4138 F 427 88.76 811 reject_vc 4 ALIGNMENT 273 YS2-7m14.p1k vc_1 427 1 1323 1749 C 427 88.76 811 reject_vc 0 ALIGNMENT 267 YS2-7m14.p1k vc_7 1 427 456 882 F 427 88.29 811 reject_vc 5 ALIGNMENT 273 YS2-7m14.p1k vc_2 427 1 1323 1749 C 427 88.76 811 reject_vc 1 ALIGNMENT 41 YS2-7m15.q1k vc_4 268 308 5831 5871 F 41 100.00 308 reject_low 4 ALIGNMENT 0 YS2-7m15.q1k vc_4 62 267 5831 5830 F 206 0.00 308 reject_low 4 ALIGNMENT 197 YS2-7m15.p1k chr07 89 318 139135 139365 F 230 95.65 318 accept_chi 1 ALIGNMENT 36 YS2-7m15.q1k vc_5 305 270 1 36 C 36 100.00 308 reject_low 7 ALIGNMENT 41 YS2-7m15.q1k vc_1 308 268 2472 2512 C 41 100.00 308 reject_low 2 ALIGNMENT 38 YS2-7m15.q1k vc_7 271 308 13525 13562 F 38 100.00 308 reject_low 6 ALIGNMENT 0 YS2-7m15.q1k vc_5 269 62 5064 5063 C 208 0.00 308 reject_low 5 ALIGNMENT 0 YS2-7m15.q1k chr07 308 269 139129 139128 C 40 0.00 308 accept_chi 0 ALIGNMENT 0 YS2-7m15.q1k vc_3 267 62 2513 2512 C 206 0.00 308 reject_low 3 ALIGNMENT 0 YS2-7m15.q1k vc_1 267 62 2513 2512 C 206 0.00 308 reject_low 2 ALIGNMENT 39 YS2-7m15.q1k vc_5 308 270 5025 5063 C 39 100.00 308 reject_low 5 ALIGNMENT 224 YS2-7m15.q1k chr07 268 26 139128 139371 C 243 97.94 308 accept_chi 0 ALIGNMENT 0 YS2-7m15.q1k vc_7 62 270 13525 13524 F 209 0.00 308 reject_low 6 ALIGNMENT 0 YS2-7m15.q1k vc_5 269 62 37 36 C 208 0.00 308 reject_low 7 ALIGNMENT 41 YS2-7m15.q1k vc_3 308 268 2472 2512 C 41 100.00 308 reject_low 3 ALIGNMENT 995 YS2-7m16.q1k chr12 1168 40 145179 146315 C 1129 97.17 1325 accept 0 ALIGNMENT 870 YS2-7m16.p1k chr12 32 1015 142016 143017 F 984 97.26 1279 accept 0 ALIGNMENT 1004 YS2-7m17.q1k chr07 1216 38 862241 863433 C 1179 96.52 1316 accept 0 ALIGNMENT 1034 YS2-7m17.p1k chr07 30 1281 858824 860070 F 1252 95.29 1295 accept 0 ALIGNMENT 961 YS2-7m18.q1k chr12 1128 38 75495 76594 C 1091 96.61 1295 accept 0 ALIGNMENT 1013 YS2-7m18.p1k chr12 29 1195 69854 71030 F 1167 96.74 1316 accept 0 ALIGNMENT 1025 YS2-7m19.q1k chr11 31 1210 231800 232997 F 1180 97.03 1294 accept 0 ALIGNMENT 926 YS2-7m19.p1k chr11 1155 61 235685 236795 C 1095 95.80 1281 accept 0 ALIGNMENT 897 YS2-7m20.p1k chr07 70 1228 313235 314393 F 1159 94.05 1368 accept 0 ALIGNMENT 1003 YS2-7m20.q1k chr07 1246 37 317807 319015 C 1210 96.36 1331 accept 0 ALIGNMENT 38 YS2-7m23.q1k vc_7 207 244 63 100 F 38 100.00 244 reject_low 8 ALIGNMENT 20 YS2-7m23.q1k vc_3 40 20 2511 2531 C 21 95.24 244 reject_low 5 ALIGNMENT 0 YS2-7m23.p1k chr13 224 241 858966 858965 F 18 0.00 241 accept_chi 1 ALIGNMENT 20 YS2-7m23.q1k vc_1 40 20 2511 2531 C 21 95.24 244 reject_low 3 ALIGNMENT 41 YS2-7m23.q1k vc_2 244 204 2105 2145 C 41 100.00 244 reject_low 4 ALIGNMENT 20 YS2-7m23.q1k vc_4 20 40 5812 5832 F 21 95.24 244 reject_low 6 ALIGNMENT 0 YS2-7m23.q1k vc_5 205 62 37 36 C 144 0.00 244 reject_low 10 ALIGNMENT 36 YS2-7m23.q1k vc_5 241 206 1 36 C 36 100.00 244 reject_low 10 ALIGNMENT 38 YS2-7m23.q1k vc_7 207 244 13525 13562 F 38 100.00 244 reject_low 9 ALIGNMENT 0 YS2-7m23.q1k vc_7 62 206 13525 13524 F 145 0.00 244 reject_low 9 ALIGNMENT 0 YS2-7m23.q1k vc_1 203 41 2513 2510 C 163 0.00 244 reject_low 3 ALIGNMENT 0 YS2-7m23.q1k vc_3 203 41 2513 2510 C 163 0.00 244 reject_low 5 ALIGNMENT 39 YS2-7m23.q1k vc_5 244 206 5025 5063 C 39 100.00 244 reject_low 7 ALIGNMENT 41 YS2-7m23.q1k vc_1 244 204 2472 2512 C 41 100.00 244 reject_low 3 ALIGNMENT 41 YS2-7m23.q1k vc_4 204 244 5831 5871 F 41 100.00 244 reject_low 6 ALIGNMENT 160 YS2-7m23.q1k chr13 203 38 858801 858966 C 166 100.00 244 accept_chi 0 ALIGNMENT 41 YS2-7m23.q1k vc_3 244 204 2472 2512 C 41 100.00 244 reject_low 5 ALIGNMENT 0 YS2-7m23.q1k vc_7 62 206 63 62 F 145 0.00 244 reject_low 8 ALIGNMENT 0 YS2-7m23.q1k vc_4 41 203 5833 5830 F 163 0.00 244 reject_low 6 ALIGNMENT 150 YS2-7m23.p1k chr13 58 223 858801 858966 F 166 98.19 241 accept_chi 1 ALIGNMENT 0 YS2-7m23.q1k chr13 244 204 858802 858801 C 41 0.00 244 accept_chi 0 ALIGNMENT 20 YS2-7m23.q1k vc_2 40 20 2144 2164 C 21 95.24 244 reject_low 4 ALIGNMENT 20 YS2-7m23.q1k vc_7 20 40 2727 2747 F 21 95.24 244 reject_low 2 ALIGNMENT 0 YS2-7m23.q1k vc_5 205 62 5064 5063 C 144 0.00 244 reject_low 7 ALIGNMENT 0 YS2-7m23.q1k vc_2 203 41 2146 2143 C 163 0.00 244 reject_low 4 ALIGNMENT 0 YS2-7m23.q1k vc_7 41 244 2747 2746 F 204 0.00 244 reject_low 2 ALIGNMENT 381 YS2-7m24.q1k chr16 765 63 462414 463106 C 703 85.92 1375 accept 0 ALIGNMENT 544 YS2-7n01.p1k chr04 978 27 336636 337589 C 952 87.61 1315 accept 0 ALIGNMENT 0 YS2-7n02.p1k chr07 224 241 1082196 1082195 F 18 0.00 241 ambiguous_tel 1 ALIGNMENT 165 YS2-7n02.p1k chr13 223 35 7783 7972 C 189 96.83 241 reject_low 3 ALIGNMENT 0 YS2-7n02.p1k chr10 224 241 743375 743374 F 18 0.00 241 reject_low 6 ALIGNMENT 0 YS2-7n02.p1k chr06 241 224 6966 6965 C 18 0.00 241 reject_low 4 ALIGNMENT 165 YS2-7n02.p1k chr02 35 223 810745 810934 F 189 96.83 241 ambiguous_tel 0 ALIGNMENT 42 YS2-7n02.q1k chr02 75 29 810888 810934 C 47 97.87 100 ambiguous_tel 0 ALIGNMENT 0 YS2-7n02.p1k chr13 241 224 7784 7783 C 18 0.00 241 reject_low 3 ALIGNMENT 0 YS2-7n02.p1k chr02 224 241 810934 810933 F 18 0.00 241 ambiguous_tel 0 ALIGNMENT 100 YS2-7n02.p1k chr10 55 223 743206 743375 F 169 87.57 241 reject_low 6 ALIGNMENT 0 YS2-7n02.p1k chr04 241 224 2342 2341 C 18 0.00 241 reject_low 8 ALIGNMENT 42 YS2-7n02.q1k chr13 29 75 7783 7829 F 47 97.87 100 reject_low 7 ALIGNMENT 0 YS2-7n02.p1k chr09 62 78 437493 437492 F 17 0.00 241 reject_low 2 ALIGNMENT 129 YS2-7n02.p1k chr07 60 223 1082032 1082196 F 164 93.90 241 ambiguous_tel 1 ALIGNMENT 0 YS2-7n02.p1k chr09 222 241 437635 437634 F 20 0.00 241 reject_low 2 ALIGNMENT 156 YS2-7n02.p1k chr14 223 35 8869 9058 C 189 95.24 241 reject_low 5 ALIGNMENT 67 YS2-7n02.p1k chr04 223 55 2341 2510 C 169 81.07 241 reject_low 8 ALIGNMENT 0 YS2-7n02.p1k chr14 241 224 8870 8869 C 18 0.00 241 reject_low 5 ALIGNMENT 45 YS2-7n02.q1k chr07 75 29 1082150 1082196 C 47 100.00 100 ambiguous_tel 1 ALIGNMENT 159 YS2-7n02.p1k chr06 223 35 6965 7154 C 189 95.77 241 reject_low 4 ALIGNMENT 125 YS2-7n02.p1k chr09 79 221 437493 437635 F 143 96.50 241 reject_low 2 ALIGNMENT 39 YS2-7n02.q1k chr09 75 31 437591 437635 C 45 97.78 100 reject_low 2 ALIGNMENT 319 YS2-7n03.q1k chr06 615 31 14309 14894 C 585 85.30 1294 reject_low 3 ALIGNMENT 0 YS2-7n03.q1k chr14 748 613 16031 16128 C 136 0.00 1294 reject_low 1 ALIGNMENT 258 YS2-7n03.q1k chr14 1225 749 15533 16030 C 477 85.95 1294 reject_low 1 ALIGNMENT 143 YS2-7n03.q1k chr15 534 119 1705 2120 C 416 78.85 1294 reject_low 5 ALIGNMENT 944 YS2-7n03.q1k chr10 31 1155 727594 728735 F 1125 95.38 1294 accept 0 ALIGNMENT 0 YS2-7n03.q1k chr15 118 62 2121 2120 C 57 0.00 1294 reject_low 5 ALIGNMENT 333 YS2-7n03.q1k chr14 612 33 16129 16708 C 580 86.38 1294 reject_low 1 ALIGNMENT 145 YS2-7n03.q1k chr04 1155 837 16980 17314 C 319 82.45 1294 reject_low 2 ALIGNMENT 0 YS2-7n03.q1k chr03 412 875 314796 314795 F 464 0.00 1294 reject_low 4 ALIGNMENT 184 YS2-7n03.q1k chr03 33 411 314417 314796 F 379 83.38 1294 reject_low 4 ALIGNMENT 346 YS2-7n03.q1k chr04 615 31 17581 18166 C 585 86.84 1294 reject_low 2 ALIGNMENT 0 YS2-7n03.q1k chr15 875 535 1706 1705 C 341 0.00 1294 reject_low 5 ALIGNMENT 802 YS2-7n03.p1k chr04 29 1049 16254 17282 F 1021 93.44 1319 reject_low 2 ALIGNMENT 0 YS2-7n03.q1k chr06 836 616 14040 14308 C 221 0.00 1294 reject_low 3 ALIGNMENT 865 YS2-7n03.p1k chr10 1072 29 728408 729461 C 1044 94.92 1319 accept 0 ALIGNMENT 0 YS2-7n03.q1k chr04 836 616 17315 17580 C 221 0.00 1294 reject_low 2 ALIGNMENT 820 YS2-7n03.p1k chr06 29 1048 12979 14006 F 1020 94.02 1319 reject_low 3 ALIGNMENT 831 YS2-7n03.p1k chr14 29 1072 14882 15935 F 1044 93.77 1319 reject_low 1 ALIGNMENT 145 YS2-7n03.q1k chr06 1155 837 13705 14039 C 319 82.45 1294 reject_low 3 ALIGNMENT 0 YS2-7n04.p1k chr02 445 357 197718 197717 C 89 0.00 894 ambiguous_trans_ua 7 ALIGNMENT 25 YS2-7n04.p1k chr14 227 108 546553 546674 C 120 75.83 894 ambiguous_trans_ua 22 ALIGNMENT 0 YS2-7n04.p1k chr12 445 358 374000 373999 C 88 0.00 894 ambiguous_trans_ua 10 ALIGNMENT 0 YS2-7n04.p1k chr14 445 361 726232 726231 C 85 0.00 894 ambiguous_trans_ua 3 ALIGNMENT 0 YS2-7n04.p1k chr07 445 357 712211 712210 C 89 0.00 894 ambiguous_trans 16 ALIGNMENT 0 YS2-7n04.p1k chr16 445 357 769318 769317 C 89 0.00 894 ambiguous_trans_ua 12 ALIGNMENT 0 YS2-7n04.p1k chr09 445 357 210306 210305 C 89 0.00 894 ambiguous_trans 18 ALIGNMENT 0 YS2-7n04.p1k chr15 445 358 854273 854272 C 88 0.00 894 ambiguous_trans_ua 11 ALIGNMENT 0 YS2-7n04.p1k chr04 445 357 668092 668091 C 89 0.00 894 ambiguous_trans_ua 20 ALIGNMENT 0 YS2-7n04.p1k chr03 445 355 168387 168386 C 91 0.00 894 ambiguous_trans_ua 21 ALIGNMENT 0 YS2-7n04.p1k chr16 445 347 856552 856551 C 99 0.00 894 ambiguous_trans_ua 2 ALIGNMENT 308 YS2-7n04.p1k chr14 357 16 546738 547078 C 342 98.25 894 ambiguous_trans_ua 13 ALIGNMENT 0 YS2-7n04.p1k chr05 357 445 250269 250268 F 89 0.00 894 ambiguous_trans_ua 9 ALIGNMENT 324 YS2-7n04.p1k chr04 16 356 945949 946289 F 341 99.71 894 ambiguous_trans_ua 4 ALIGNMENT 312 YS2-7n04.p1k chr16 356 16 769317 769657 C 341 98.53 894 ambiguous_trans_ua 12 ALIGNMENT 0 YS2-7n04.p1k chr11 357 445 202629 202628 F 89 0.00 894 ambiguous_trans_ua 19 ALIGNMENT 0 YS2-7n04.p1k chr07 357 445 319765 319764 F 89 0.00 894 ambiguous_trans_ua 14 ALIGNMENT 310 YS2-7n04.p1k chr09 356 16 210305 210644 C 341 98.53 894 ambiguous_trans 18 ALIGNMENT 43 YS2-7n04.q1k chr13 55 100 500928 500973 F 46 97.83 124 accept 0 ALIGNMENT 0 YS2-7n04.p1k chr01 445 357 182615 182614 C 89 0.00 894 ambiguous_trans_ua 8 ALIGNMENT 0 YS2-7n04.p1k chr14 445 228 546554 546553 C 218 0.00 894 ambiguous_trans_ua 22 ALIGNMENT 0 YS2-7n04.p1k chr09 445 357 205218 205217 C 89 0.00 894 ambiguous_trans 17 ALIGNMENT 0 YS2-7n04.p1k chr14 445 358 546739 546738 C 88 0.00 894 ambiguous_trans_ua 13 ALIGNMENT 0 YS2-7n04.p1k chr07 445 357 735988 735987 C 89 0.00 894 ambiguous_trans_ua 5 ALIGNMENT 310 YS2-7n04.p1k chr07 356 16 707199 707538 C 341 98.53 894 ambiguous_trans 15 ALIGNMENT 321 YS2-7n04.p1k chr05 16 356 434627 434967 F 341 99.41 894 ambiguous_trans_ua 6 ALIGNMENT 310 YS2-7n04.p1k chr11 16 356 202290 202629 F 341 98.53 894 ambiguous_trans_ua 19 ALIGNMENT 310 YS2-7n04.p1k chr07 16 356 319426 319765 F 341 98.53 894 ambiguous_trans_ua 14 ALIGNMENT 309 YS2-7n04.p1k chr04 356 16 668091 668431 C 341 98.24 894 ambiguous_trans_ua 20 ALIGNMENT 310 YS2-7n04.p1k chr14 360 12 726231 726579 C 349 97.71 894 ambiguous_trans_ua 3 ALIGNMENT 311 YS2-7n04.p1k chr15 357 16 854272 854612 C 342 98.54 894 ambiguous_trans_ua 11 ALIGNMENT 310 YS2-7n04.p1k chr07 356 16 712210 712549 C 341 98.53 894 ambiguous_trans 16 ALIGNMENT 323 YS2-7n04.p1k chr08 7 359 146315 146667 F 353 98.58 894 ambiguous_trans_ua 1 ALIGNMENT 311 YS2-7n04.p1k chr12 357 16 373999 374339 C 342 98.54 894 ambiguous_trans_ua 10 ALIGNMENT 313 YS2-7n04.p1k chr05 15 356 249928 250269 F 342 98.54 894 ambiguous_trans_ua 9 ALIGNMENT 0 YS2-7n04.p1k chr04 357 445 946289 946288 F 89 0.00 894 ambiguous_trans_ua 4 ALIGNMENT 188 YS2-7n04.p1k chr03 354 145 168386 168595 C 210 98.10 894|0,3 ambiguous_trans_ua 21 ALIGNMENT 312 YS2-7n04.p1k chr16 346 7 856551 856891 C 340 98.82 894 ambiguous_trans_ua 2 ALIGNMENT 309 YS2-7n04.p1k chr02 356 12 197717 198061 C 345 97.97 894 ambiguous_trans_ua 7 ALIGNMENT 0 YS2-7n04.p1k chr03 147 148 168593 168931 C 0 0.00 894 ambiguous_trans_ua 21 ALIGNMENT 324 YS2-7n04.p1k chr07 356 16 735987 736327 C 341 99.71 894 ambiguous_trans_ua 5 ALIGNMENT 312 YS2-7n04.p1k chr01 356 14 182614 182955 C 343 98.54 894 ambiguous_trans_ua 8 ALIGNMENT 130 YS2-7n04.p1k chr03 150 15 168929 169064 C 136 100.00 894|3,0 ambiguous_trans_ua 21 ALIGNMENT 0 YS2-7n04.p1k chr05 357 445 434967 434966 F 89 0.00 894 ambiguous_trans_ua 6 ALIGNMENT 310 YS2-7n04.p1k chr09 356 16 205217 205556 C 341 98.53 894 ambiguous_trans 17 ALIGNMENT 0 YS2-7n04.p1k chr14 107 62 546675 546674 C 46 0.00 894 ambiguous_trans_ua 22 ALIGNMENT 0 YS2-7n04.p1k chr08 360 445 146667 146666 F 86 0.00 894 ambiguous_trans_ua 1 ALIGNMENT 0 YS2-7n04.p1k chr07 445 357 707200 707199 C 89 0.00 894 ambiguous_trans 15 ALIGNMENT 933 YS2-7n05.p1k chr08 31 1137 181933 183058 F 1107 95.48 1362 accept 0 ALIGNMENT 920 YS2-7n05.q1k chr08 1101 42 185121 186196 C 1060 96.04 1288 accept 0 ALIGNMENT 0 YS2-7n06.p1k chr09 839 645 37238 37237 C 195 0.00 1310 reject_bad_break 0 ALIGNMENT 0 YS2-7n06.p1k chr09 569 568 37307 37322 C 2 0.00 1310 reject_bad_break 0 ALIGNMENT 366 YS2-7n06.p1k chr09 567 30 37323 37860 C 538 89.78 1310 reject_bad_break 0 ALIGNMENT 30 YS2-7n06.p1k chr09 644 570 37237 37306 C 75 86.67 1310 reject_bad_break 0 ALIGNMENT 295 YS2-7n07.q1k chr03 41 1145 302137 303252 F 1105 77.56 1307 reject_low 1 ALIGNMENT 936 YS2-7n07.q1k chr14 36 1145 754140 755261 F 1110 96.04 1307 accept 0 ALIGNMENT 971 YS2-7n07.p1k chr14 1172 30 757934 759090 C 1143 96.24 1333 accept 0 ALIGNMENT 52 YS2-7n08.q1k chr06 30 81 70179 70230 F 52 100.00 106 accept 0 ALIGNMENT 958 YS2-7n08.p1k chr06 1181 59 71763 72903 C 1123 96.17 1360 accept 0 ALIGNMENT 1023 YS2-7n09.q1k chr16 1274 42 20740 21969 C 1233 95.78 1380 accept 0 ALIGNMENT 967 YS2-7n09.p1k chr16 54 1155 20686 21803 F 1102 97.28 1341 accept 0 ALIGNMENT 977 YS2-7n10.p1k chr04 29 1144 1202727 1203857 F 1116 96.77 1343 accept_trans 0 ALIGNMENT 43 YS2-7n10.q1k chr04 81 28 1213766 1213817 C 54 96.30 108 accept_trans 0 ALIGNMENT 114 YS2-7n12.p1k vc_4 1 126 6101 6226 F 126 96.83 861 reject_low 7 ALIGNMENT 408 YS2-7n12.p1k vc_1 552 1 1323 1875 C 552 91.85 861 reject_vc 0 ALIGNMENT 408 YS2-7n12.p1k vc_5 552 1 4243 4795 C 552 91.85 861 reject_vc 3 ALIGNMENT 408 YS2-7n12.p1k vc_3 552 1 1323 1875 C 552 91.85 861 reject_vc 2 ALIGNMENT 402 YS2-7n12.p1k vc_7 1 552 330 882 F 552 91.49 861 reject_vc 4 ALIGNMENT 408 YS2-7n12.p1k vc_2 552 1 1323 1875 C 552 91.85 861 reject_vc 1 ALIGNMENT 387 YS2-7n12.p1k vc_6 1 505 3586 4089 F 505 92.67 861 reject_low 6 ALIGNMENT 402 YS2-7n12.p1k vc_7 1 552 13792 14344 F 552 91.49 861 reject_vc 5 ALIGNMENT 1060 YS2-7n14.p1k chr04 31 1252 110691 111916 F 1222 96.32 1425 accept 0 ALIGNMENT 662 YS2-7n16.p1k chr13 1023 39 188518 189503 C 985 90.96 1334 reject_low 20 ALIGNMENT 49 YS2-7n16.q1k chr07 81 30 570276 570327 C 52 100.00 104 ambiguous_trans 4 ALIGNMENT 28 YS2-7n16.q1k chr15 30 81 122039 122090 F 52 86.54 104 reject_low 28 ALIGNMENT 49 YS2-7n16.q1k chr04 81 30 515216 515267 C 52 100.00 104 ambiguous_trans 7 ALIGNMENT 49 YS2-7n16.q1k chr15 30 81 974658 974709 F 52 100.00 104 ambiguous_trans 6 ALIGNMENT 646 YS2-7n16.p1k chr13 1023 28 200685 201681 C 996 90.16 1334 reject_low 23 ALIGNMENT 791 YS2-7n16.p1k chr04 28 1023 878869 879865 F 996 94.98 1334 reject_low 14 ALIGNMENT 803 YS2-7n16.p1k chr04 1035 28 985546 986554 C 1008 95.14 1334 ambiguous_trans 11 ALIGNMENT 884 YS2-7n16.p1k chr12 1035 28 945570 946578 C 1008 97.82 1334 ambiguous_trans 9 ALIGNMENT 28 YS2-7n16.q1k chr07 81 30 818929 818980 C 52 86.54 104 reject_low 27 ALIGNMENT 890 YS2-7n16.p1k chr04 28 1035 514254 515262 F 1008 98.02 1334 ambiguous_trans 7 ALIGNMENT 49 YS2-7n16.q1k chr02 30 81 34017 34068 F 52 100.00 104 ambiguous_trans 10 ALIGNMENT 743 YS2-7n16.p1k chr07 28 1023 562418 563414 F 996 93.37 1334 reject_low 16 ALIGNMENT 0 YS2-7n16.p1k chr10 203 62 483136 483135 C 142 0.00 1334 reject_low 25 ALIGNMENT 360 YS2-7n16.p1k chr10 1023 204 482315 483135 C 820 83.29 1334 reject_low 25 ALIGNMENT 890 YS2-7n16.p1k chr14 28 1035 562603 563611 F 1008 98.02 1334 ambiguous_trans 8 ALIGNMENT 896 YS2-7n16.p1k chr07 28 1035 569314 570322 F 1008 98.21 1334 ambiguous_trans 4 ALIGNMENT 791 YS2-7n16.p1k chr14 1023 28 523496 524492 C 996 94.98 1334 reject_low 15 ALIGNMENT 49 YS2-7n16.q1k chr14 81 30 563565 563616 C 52 100.00 104 ambiguous_trans 8 ALIGNMENT 896 YS2-7n16.p1k chr15 1035 28 974663 975671 C 1008 98.21 1334 ambiguous_trans 6 ALIGNMENT 49 YS2-7n16.q1k chr12 30 81 945565 945616 F 52 100.00 104 ambiguous_trans 9 ALIGNMENT 878 YS2-7n16.p1k chr02 1035 28 34022 35030 C 1008 97.62 1334 ambiguous_trans 10 ALIGNMENT 896 YS2-7n16.p1k chr07 1035 28 815833 816841 C 1008 98.21 1334 ambiguous_trans 5 ALIGNMENT 49 YS2-7n16.q1k chr12 81 30 977269 977320 C 52 100.00 104 reject_low 24 ALIGNMENT 49 YS2-7n16.q1k chr15 81 30 705596 705647 C 52 100.00 104 ambiguous_trans 0 ALIGNMENT 28 YS2-7n16.q1k chr04 30 81 1211027 1211078 F 52 86.54 104 reject_low 26 ALIGNMENT 896 YS2-7n16.p1k chr03 1035 28 89191 90199 C 1008 98.21 1334 ambiguous_trans 2 ALIGNMENT 49 YS2-7n16.q1k chr04 30 81 876192 876243 F 52 100.00 104 ambiguous_trans 1 ALIGNMENT 740 YS2-7n16.p1k chr16 28 1023 805212 806208 F 996 93.27 1334 reject_low 18 ALIGNMENT 688 YS2-7n16.p1k chr10 1023 28 476731 477727 C 996 91.57 1334 reject_low 19 ALIGNMENT 662 YS2-7n16.p1k chr12 1023 28 655178 656174 C 996 90.66 1334 reject_low 12 ALIGNMENT 911 YS2-7n16.p1k chr15 28 1035 704634 705642 F 1008 98.71 1334 ambiguous_trans 0 ALIGNMENT 654 YS2-7n16.p1k chr16 39 1023 851211 852196 F 985 90.66 1334 reject_low 22 ALIGNMENT 49 YS2-7n16.q1k chr04 30 81 985541 985592 F 52 100.00 104 ambiguous_trans 11 ALIGNMENT 28 YS2-7n16.q1k chr12 30 81 655161 655212 F 52 86.54 104 reject_low 12 ALIGNMENT 49 YS2-7n16.q1k chr06 30 81 142284 142335 F 52 100.00 104 ambiguous_trans 3 ALIGNMENT 662 YS2-7n16.p1k chr16 1023 39 848765 849750 C 985 90.96 1334 reject_low 21 ALIGNMENT 815 YS2-7n16.p1k chr04 28 1023 646068 647064 F 996 95.78 1334 reject_low 13 ALIGNMENT 740 YS2-7n16.p1k chr12 1023 28 597497 598493 C 996 93.27 1334 reject_low 17 ALIGNMENT 49 YS2-7n16.q1k chr07 30 81 815828 815879 F 52 100.00 104 ambiguous_trans 5 ALIGNMENT 908 YS2-7n16.p1k chr04 1035 28 876197 877205 C 1008 98.61 1334 ambiguous_trans 1 ALIGNMENT 49 YS2-7n16.q1k chr03 30 81 89186 89237 F 52 100.00 104 ambiguous_trans 2 ALIGNMENT 896 YS2-7n16.p1k chr06 1035 28 142289 143297 C 1008 98.21 1334 ambiguous_trans 3 ALIGNMENT 0 YS2-7o01.p1k chrm 686 685 58910 58900 F 0 0.00 1244 reject_low 8 ALIGNMENT 21 YS2-7o01.p1k chrm 686 707 58901 58922 F 22 100.00 1244 reject_low 8 ALIGNMENT 85 YS2-7o01.p1k chr04 864 953 437769 437858 F 90 98.89 1244 reject_low 9 ALIGNMENT 0 YS2-7o01.p1k chrm 62 615 58841 58840 F 554 0.00 1244 reject_low 8 ALIGNMENT 0 YS2-7o01.p1k chr01 861 62 182600 182599 C 800 0.00 1244 reject_low 2 ALIGNMENT 56 YS2-7o01.q1k chr04 1054 1139 980963 981049 F 86 89.53 1229 reject_low 1 ALIGNMENT 41 YS2-7o01.p1k chrm 616 685 58841 58909 F 70 91.43 1244 reject_low 8 ALIGNMENT 0 YS2-7o01.q1k chr04 62 1053 980963 980962 F 992 0.00 1229 reject_low 1 ALIGNMENT 0 YS2-7o01.p1k chr04 863 62 981050 981049 C 802 0.00 1244 reject_low 1 ALIGNMENT 0 YS2-7o01.q1k chr10 62 1051 523918 523917 F 990 0.00 1229 reject_low 18 ALIGNMENT 89 YS2-7o01.p1k chr12 953 863 167935 168025 C 91 100.00 1244 reject_low 4 ALIGNMENT 1008 YS2-7o01.q1k chr07 41 1225 560643 561835 F 1185 95.95 1229 accept_trans 0 ALIGNMENT 56 YS2-7o01.q1k chr08 1059 1140 133019 133101 F 82 90.24 1229 reject_low 19 ALIGNMENT 88 YS2-7o01.p1k chr02 864 953 227078 227167 F 90 100.00 1244 reject_low 6 ALIGNMENT 0 YS2-7o01.q1k chr02 1051 62 227168 227167 C 990 0.00 1229 reject_low 16 ALIGNMENT 58 YS2-7o01.q1k chr12 1052 1140 167935 168025 F 89 89.89 1229 reject_low 14 ALIGNMENT 57 YS2-7o01.q1k chr04 1139 1052 437769 437858 C 88 89.77 1229 reject_low 17 ALIGNMENT 687 YS2-7o01.p1k chr07 770 31 567765 568504 C 740 99.86 1244|2,0 accept_trans 0 ALIGNMENT 83 YS2-7o01.p1k chr08 953 863 133011 133101 C 91 97.80 1244 reject_low 11 ALIGNMENT 0 YS2-7o01.q1k chr01 62 1051 182508 182507 F 990 0.00 1229 reject_low 12 ALIGNMENT 57 YS2-7o01.q1k chr02 1139 1052 227078 227167 C 88 89.77 1229 reject_low 16 ALIGNMENT 89 YS2-7o01.p1k chr13 953 863 259150 259240 C 91 100.00 1244 reject_low 5 ALIGNMENT 57 YS2-7o01.q1k chr10 1052 1139 523918 524007 F 88 89.77 1229 reject_low 18 ALIGNMENT 90 YS2-7o01.p1k chr01 953 862 182508 182599 C 92 100.00 1244 reject_low 2 ALIGNMENT 59 YS2-7o01.q1k chr01 1052 1141 182508 182599 F 90 91.11 1229 reject_low 12 ALIGNMENT 0 YS2-7o01.p1k chr10 863 62 524008 524007 C 802 0.00 1244 reject_low 7 ALIGNMENT 88 YS2-7o01.p1k chr10 953 864 523918 524007 C 90 100.00 1244 reject_low 7 ALIGNMENT 0 YS2-7o01.q1k chr08 62 1058 133019 133018 F 997 0.00 1229 reject_low 19 ALIGNMENT 84 YS2-7o01.p1k chr04 864 953 1305620 1305710 F 90 98.89 1244 reject_low 10 ALIGNMENT 0 YS2-7o01.p1k chr04 62 863 1305620 1305619 F 802 0.00 1244 reject_low 10 ALIGNMENT 0 YS2-7o01.p1k chrm 708 859 58922 58921 F 152 0.00 1244 reject_low 8 ALIGNMENT 0 YS2-7o01.q1k chr13 62 1051 259150 259149 F 990 0.00 1229 reject_low 15 ALIGNMENT 83 YS2-7o01.p1k chr04 947 864 980966 981049 C 84 100.00 1244 reject_low 1 ALIGNMENT 0 YS2-7o01.p1k chr12 862 62 168026 168025 C 801 0.00 1244 reject_low 4 ALIGNMENT 0 YS2-7o01.p1k chr05 62 862 86603 86602 F 801 0.00 1244 reject_low 3 ALIGNMENT 0 YS2-7o01.q1k chr05 1051 62 86694 86693 C 990 0.00 1229 reject_low 13 ALIGNMENT 0 YS2-7o01.p1k chr02 62 863 227078 227077 F 802 0.00 1244 reject_low 6 ALIGNMENT 89 YS2-7o01.p1k chr05 863 953 86603 86693 F 91 100.00 1244 reject_low 3 ALIGNMENT 0 YS2-7o01.q1k chr04 1051 62 437859 437858 C 990 0.00 1229 reject_low 17 ALIGNMENT 336 YS2-7o01.p1k chr07 1238 766 561365 561846 C 473 92.81 1244|0,3 accept_trans 0 ALIGNMENT 0 YS2-7o01.p1k chr07 768 769 561844 567766 C 0 0.00 1244 accept_trans 0 ALIGNMENT 0 YS2-7o01.p1k chr13 862 62 259241 259240 C 801 0.00 1244 reject_low 5 ALIGNMENT 0 YS2-7o01.p1k chr04 62 863 437769 437768 F 802 0.00 1244 reject_low 9 ALIGNMENT 0 YS2-7o01.q1k chr12 62 1051 167935 167934 F 990 0.00 1229 reject_low 14 ALIGNMENT 58 YS2-7o01.q1k chr13 1052 1140 259150 259240 F 89 91.01 1229 reject_low 15 ALIGNMENT 0 YS2-7o01.p1k chr08 862 62 133102 133101 C 801 0.00 1244 reject_low 11 ALIGNMENT 58 YS2-7o01.q1k chr05 1140 1052 86603 86693 C 89 89.89 1229 reject_low 13 ALIGNMENT 48 YS2-7o02.p1k chr15 194 329 527024 527159 F 136 79.41 1305 reject_low 1 ALIGNMENT 1036 YS2-7o02.q1k chr14 42 1225 417911 419099 F 1184 96.54 1225 accept 0 ALIGNMENT 0 YS2-7o02.p1k chr15 62 193 527024 527023 F 132 0.00 1305 reject_low 1 ALIGNMENT 1031 YS2-7o02.p1k chr14 1207 33 421664 422838 C 1175 96.68 1305 accept 0 ALIGNMENT 0 YS2-7o02.p1k chr15 330 886 527159 527158 F 557 0.00 1305 reject_low 1 ALIGNMENT 982 YS2-7o03.q1k chr02 40 1197 470554 471723 F 1158 94.91 1264 accept 0 ALIGNMENT 940 YS2-7o03.p1k chr02 1133 34 471721 472823 C 1100 95.73 1292 accept 0 ALIGNMENT 894 YS2-7o04.q1k chr11 41 1103 497135 498211 F 1063 96.71 1228 accept 0 ALIGNMENT 799 YS2-7o04.p1k chr11 966 28 501929 502881 C 939 96.06 1235 accept 0 ALIGNMENT 0 YS2-7o05.q1k chr12 62 643 489754 489753 F 582 0.00 1342 reject_low 2 ALIGNMENT 0 YS2-7o05.q1k chr12 62 288 451419 451418 F 227 0.00 1342 reject_low 1 ALIGNMENT 430 YS2-7o05.q1k chr12 644 1341 489754 490448 F 698 88.54 1342 reject_low 2 ALIGNMENT 716 YS2-7o05.q1k chr12 289 1341 451419 452480 F 1053 91.26 1342 reject_low 1 ALIGNMENT 916 YS2-7o05.q1k chr12 39 1341 460295 461617 F 1303 91.94 1342 accept 0 ALIGNMENT 993 YS2-7o05.p1k chr12 1119 33 453529 454625 C 1087 97.70 1294 reject_low 1 ALIGNMENT 993 YS2-7o05.p1k chr12 1119 33 462666 463762 C 1087 97.70 1294 accept 0 ALIGNMENT 345 YS2-7o06.p1k chr09 382 27 173478 173833 C 356 99.72 401 accept_chi 0 ALIGNMENT 335 YS2-7o06.q1k chr09 29 382 173478 173833 F 354 99.15 423 accept_chi 1 ALIGNMENT 38 YS2-7o06.q1k vc_7 386 423 13525 13562 F 38 100.00 423 reject_low 6 ALIGNMENT 0 YS2-7o06.q1k chr09 383 423 173833 173832 F 41 0.00 423 accept_chi 1 ALIGNMENT 36 YS2-7o06.q1k vc_5 420 385 1 36 C 36 100.00 423 reject_low 7 ALIGNMENT 0 YS2-7o06.q1k vc_4 62 382 5831 5830 F 321 0.00 423 reject_low 4 ALIGNMENT 0 YS2-7o06.p1k chr09 401 383 173479 173478 C 19 0.00 401 accept_chi 0 ALIGNMENT 0 YS2-7o06.q1k vc_5 384 62 37 36 C 323 0.00 423 reject_low 7 ALIGNMENT 41 YS2-7o06.q1k vc_1 423 383 2472 2512 C 41 100.00 423 reject_low 2 ALIGNMENT 0 YS2-7o06.q1k vc_7 62 385 13525 13524 F 324 0.00 423 reject_low 6 ALIGNMENT 0 YS2-7o06.q1k vc_5 384 62 5064 5063 C 323 0.00 423 reject_low 5 ALIGNMENT 41 YS2-7o06.q1k vc_4 383 423 5831 5871 F 41 100.00 423 reject_low 4 ALIGNMENT 41 YS2-7o06.q1k vc_3 423 383 2472 2512 C 41 100.00 423 reject_low 3 ALIGNMENT 0 YS2-7o06.q1k vc_1 382 62 2513 2512 C 321 0.00 423 reject_low 2 ALIGNMENT 39 YS2-7o06.q1k vc_5 423 385 5025 5063 C 39 100.00 423 reject_low 5 ALIGNMENT 0 YS2-7o06.q1k vc_3 382 62 2513 2512 C 321 0.00 423 reject_low 3 ALIGNMENT 1001 YS2-7o07.p1k chr11 1191 27 147611 148779 C 1165 96.48 1327 accept 0 ALIGNMENT 980 YS2-7o08.p1k chr12 1157 29 463769 464910 C 1129 96.55 1324 accept 1 ALIGNMENT 964 YS2-7o08.q1k chr12 41 1122 463152 464249 F 1082 97.13 1281 accept 1 ALIGNMENT 980 YS2-7o08.p1k chr12 1157 29 454632 455773 C 1129 96.55 1324 accept 0 ALIGNMENT 964 YS2-7o08.q1k chr12 41 1122 454015 455112 F 1082 97.13 1281 accept 0 ALIGNMENT 963 YS2-7o09.q1k chr10 1262 40 201793 203031 C 1223 94.85 1305 ambiguous_trans 0 ALIGNMENT 950 YS2-7o09.q1k chr08 1187 40 89944 91099 C 1148 95.99 1305 reject_low 2 ALIGNMENT 893 YS2-7o09.p1k chr08 39 1077 86243 87295 F 1039 97.11 1256 reject_low 2 ALIGNMENT 896 YS2-7o09.p1k chr10 39 1077 198172 199227 F 1039 97.31 1256 ambiguous_trans 0 ALIGNMENT 888 YS2-7o09.p1k chr16 1077 39 441350 442401 C 1039 97.02 1256 ambiguous_trans 1 ALIGNMENT 951 YS2-7o09.q1k chr16 40 1262 437545 438783 F 1223 94.60 1305 ambiguous_trans 1 ALIGNMENT 974 YS2-7o10.p1k chr12 35 1142 82831 83955 F 1108 96.12 1295 accept 0 ALIGNMENT 876 YS2-7o10.q1k chr12 1123 42 86248 87343 C 1082 95.19 1293 accept 0 ALIGNMENT 25 YS2-7o12.p1k chr05 29 105 142932 143008 F 77 84.42 421 reject_low 6 ALIGNMENT 0 YS2-7o12.q1k chr05 440 400 142933 142932 C 41 0.00 440 reject_low 7 ALIGNMENT 25 YS2-7o12.q1k chr05 399 323 142932 143008 C 77 84.42 440 reject_low 7 ALIGNMENT 0 YS2-7o12.q1k chr09 400 440 137139 137138 F 41 0.00 440 accept_chi 1 ALIGNMENT 327 YS2-7o12.q1k chr09 26 399 136764 137139 F 374 97.33 440 accept_chi 1 ALIGNMENT 41 YS2-7o12.q1k vc_4 400 440 5831 5871 F 41 100.00 440 reject_low 4 ALIGNMENT 337 YS2-7o12.p1k chr09 404 29 136764 137139 C 376 97.87 421 accept_chi 0 ALIGNMENT 38 YS2-7o12.q1k vc_7 403 440 13525 13562 F 38 100.00 440 reject_low 5 ALIGNMENT 0 YS2-7o12.p1k chr05 106 421 143008 143007 F 316 0.00 421 reject_low 6 ALIGNMENT 0 YS2-7o12.q1k vc_1 399 62 2513 2512 C 338 0.00 440 reject_low 2 ALIGNMENT 0 YS2-7o12.q1k vc_4 62 399 5831 5830 F 338 0.00 440 reject_low 4 ALIGNMENT 0 YS2-7o12.p1k chr09 421 405 136765 136764 C 17 0.00 421 accept_chi 0 ALIGNMENT 0 YS2-7o12.q1k chr05 322 62 143009 143008 C 261 0.00 440 reject_low 7 ALIGNMENT 0 YS2-7o12.q1k vc_3 399 62 2513 2512 C 338 0.00 440 reject_low 3 ALIGNMENT 41 YS2-7o12.q1k vc_3 440 400 2472 2512 C 41 100.00 440 reject_low 3 ALIGNMENT 0 YS2-7o12.q1k vc_7 62 402 13525 13524 F 341 0.00 440 reject_low 5 ALIGNMENT 41 YS2-7o12.q1k vc_1 440 400 2472 2512 C 41 100.00 440 reject_low 2 ALIGNMENT 839 YS2-7o14.p1k chr11 996 33 179939 180919 C 964 97.41 1235 accept 0 ALIGNMENT 953 YS2-7o14.q1k chr11 36 1216 178222 179401 F 1181 94.75 1300 accept 0 ALIGNMENT 250 YS2-7o15.p1k chr05 301 30 228509 228782 C 272 98.16 320 accept_chi 1 ALIGNMENT 41 YS2-7o15.q1k vc_1 361 321 2472 2512 C 41 100.00 361 reject_low 2 ALIGNMENT 38 YS2-7o15.q1k vc_7 324 361 13525 13562 F 38 100.00 361 reject_low 7 ALIGNMENT 41 YS2-7o15.q1k vc_4 321 361 5831 5871 F 41 100.00 361 reject_low 5 ALIGNMENT 0 YS2-7o15.q1k vc_1 320 62 2513 2512 C 259 0.00 361 reject_low 2 ALIGNMENT 0 YS2-7o15.q1k chr05 322 361 228789 228788 F 40 0.00 361 accept_chi 0 ALIGNMENT 41 YS2-7o15.q1k vc_3 361 321 2472 2512 C 41 100.00 361 reject_low 4 ALIGNMENT 275 YS2-7o15.q1k chr05 41 321 228509 228789 F 281 100.00 361 accept_chi 0 ALIGNMENT 0 YS2-7o15.q1k vc_7 62 323 13525 13524 F 262 0.00 361 reject_low 7 ALIGNMENT 0 YS2-7o15.q1k vc_5 322 62 5064 5063 C 261 0.00 361 reject_low 6 ALIGNMENT 36 YS2-7o15.q1k vc_5 358 323 1 36 C 36 100.00 361 reject_low 8 ALIGNMENT 39 YS2-7o15.q1k vc_5 361 323 5025 5063 C 39 100.00 361 reject_low 6 ALIGNMENT 41 YS2-7o15.q1k vc_2 361 321 2105 2145 C 41 100.00 361 reject_low 3 ALIGNMENT 0 YS2-7o15.p1k chr05 320 302 228510 228509 C 19 0.00 320 accept_chi 1 ALIGNMENT 0 YS2-7o15.q1k vc_2 320 62 2146 2145 C 259 0.00 361 reject_low 3 ALIGNMENT 0 YS2-7o15.q1k vc_4 62 320 5831 5830 F 259 0.00 361 reject_low 5 ALIGNMENT 0 YS2-7o15.q1k vc_3 320 62 2513 2512 C 259 0.00 361 reject_low 4 ALIGNMENT 0 YS2-7o15.q1k vc_5 322 62 37 36 C 261 0.00 361 reject_low 8 ALIGNMENT 0 YS2-7o16.p1k chr06 62 326 31622 31621 F 265 0.00 1298 reject_low 2 ALIGNMENT 0 YS2-7o16.p1k chr06 435 838 31729 31728 F 404 0.00 1298 reject_low 2 ALIGNMENT 0 YS2-7o16.p1k chr12 838 68 472465 472464 C 771 0.00 1298 reject_low 3 ALIGNMENT 1039 YS2-7o16.q1k chr12 39 1212 464810 465999 F 1174 96.76 1283 accept 1 ALIGNMENT 942 YS2-7o16.p1k chr12 1136 30 458588 459712 C 1107 96.66 1298 accept 0 ALIGNMENT 94 YS2-7o16.p1k chr06 327 434 31622 31729 F 108 98.15 1298 reject_low 2 ALIGNMENT 38 YS2-7o16.p1k chr12 67 30 482044 482081 C 38 100.00 1298 reject_low 4 ALIGNMENT 0 YS2-7o16.p1k chr12 838 68 482045 482044 C 771 0.00 1298 reject_low 4 ALIGNMENT 942 YS2-7o16.p1k chr12 1136 30 467725 468849 C 1107 96.66 1298 accept 1 ALIGNMENT 1039 YS2-7o16.q1k chr12 39 1212 455673 456862 F 1174 96.76 1283 accept 0 ALIGNMENT 38 YS2-7o16.p1k chr12 67 30 485696 485733 C 38 100.00 1298 reject_low 5 ALIGNMENT 38 YS2-7o16.p1k chr12 67 30 472464 472501 C 38 100.00 1298 reject_low 3 ALIGNMENT 0 YS2-7o16.p1k chr12 838 68 489349 489348 C 771 0.00 1298 reject_low 6 ALIGNMENT 38 YS2-7o16.p1k chr12 67 30 489348 489385 C 38 100.00 1298 reject_low 6 ALIGNMENT 0 YS2-7o16.p1k chr12 838 68 485697 485696 C 771 0.00 1298 reject_low 5 ALIGNMENT 0 YS2-7o17.p1k chr08 1004 62 514864 514863 C 943 0.00 1287 reject_low 2 ALIGNMENT 0 YS2-7o17.q1k chr08 404 846 514864 514863 F 443 0.00 1278 reject_low 1 ALIGNMENT 0 YS2-7o17.q1k chr08 62 375 514837 514836 F 314 0.00 1278 reject_low 1 ALIGNMENT 951 YS2-7o17.p1k chr08 1162 29 100322 101454 C 1134 96.47 1287 accept 0 ALIGNMENT 20 YS2-7o17.p1k chr08 1031 1005 514837 514863 C 27 100.00 1287 reject_low 2 ALIGNMENT 21 YS2-7o17.q1k chr08 376 403 514837 514864 F 28 100.00 1278 reject_low 1 ALIGNMENT 936 YS2-7o17.q1k chr08 40 1159 100125 101247 F 1120 95.89 1278 accept 0 ALIGNMENT 935 YS2-7o18.p1k chr12 1146 28 377205 378328 C 1119 95.53 1343 accept 0 ALIGNMENT 991 YS2-7o18.q1k chr12 42 1146 375841 376948 F 1105 96.83 1286 accept 0 ALIGNMENT 1024 YS2-7o19.q1k chr13 1262 30 862506 863754 C 1233 94.97 1274 accept 0 ALIGNMENT 951 YS2-7o19.p1k chr13 49 1210 860205 861380 F 1162 94.92 1272 accept 0 ALIGNMENT 0 YS2-7o20.q1k vc_5 242 62 37 36 C 181 0.00 281 reject_vc 5 ALIGNMENT 41 YS2-7o20.q1k vc_1 281 241 2472 2512 C 41 100.00 281 reject_vc 0 ALIGNMENT 39 YS2-7o20.q1k vc_5 281 243 5025 5063 C 39 100.00 281 reject_vc 3 ALIGNMENT 0 YS2-7o20.q1k vc_4 62 240 5831 5830 F 179 0.00 281 reject_vc 2 ALIGNMENT 0 YS2-7o20.q1k vc_3 240 62 2513 2512 C 179 0.00 281 reject_vc 1 ALIGNMENT 0 YS2-7o20.q1k vc_5 242 62 5064 5063 C 181 0.00 281 reject_vc 3 ALIGNMENT 38 YS2-7o20.q1k vc_7 244 281 13525 13562 F 38 100.00 281 reject_vc 4 ALIGNMENT 41 YS2-7o20.q1k vc_3 281 241 2472 2512 C 41 100.00 281 reject_vc 1 ALIGNMENT 41 YS2-7o20.q1k vc_4 241 281 5831 5871 F 41 100.00 281 reject_vc 2 ALIGNMENT 0 YS2-7o20.q1k vc_1 240 62 2513 2512 C 179 0.00 281 reject_vc 0 ALIGNMENT 36 YS2-7o20.q1k vc_5 278 243 1 36 C 36 100.00 281 reject_vc 5 ALIGNMENT 0 YS2-7o20.q1k vc_7 62 243 13525 13524 F 182 0.00 281 reject_vc 4 ALIGNMENT 146 YS2-7o21.q1k chr13 664 212 668327 668779 C 453 78.37 1344 accept 0 ALIGNMENT 0 YS2-7o23.p1k chr02 210 193 795850 795849 C 18 0.00 210 accept 0 ALIGNMENT 135 YS2-7o23.p1k chr02 192 35 795849 796008 C 158 95.57 210 accept 0 ALIGNMENT 510 YS2-7o24.q1k chr02 64 592 419081 419609 F 529 99.62 633 accept_chi 1 ALIGNMENT 0 YS2-7o24.q1k vc_3 591 92 2514 2513 C 500 0.00 633 reject_low 3 ALIGNMENT 38 YS2-7o24.q1k vc_7 596 633 13525 13562 F 38 100.00 633 reject_low 6 ALIGNMENT 0 YS2-7o24.q1k vc_5 594 92 37 36 C 503 0.00 633 reject_low 7 ALIGNMENT 0 YS2-7o24.q1k chr02 593 633 419609 419608 F 41 0.00 633 accept_chi 1 ALIGNMENT 514 YS2-7o24.p1k chr02 576 36 419067 419609 C 541 99.08 596 accept_chi 0 ALIGNMENT 0 YS2-7o24.q1k vc_5 594 92 5064 5063 C 503 0.00 633 reject_low 5 ALIGNMENT 0 YS2-7o24.q1k vc_7 92 595 13525 13524 F 504 0.00 633 reject_low 6 ALIGNMENT 0 YS2-7o24.q1k vc_1 591 92 2514 2513 C 500 0.00 633 reject_low 2 ALIGNMENT 39 YS2-7o24.q1k vc_5 633 595 5025 5063 C 39 100.00 633 reject_low 5 ALIGNMENT 36 YS2-7o24.q1k vc_5 630 595 1 36 C 36 100.00 633 reject_low 7 ALIGNMENT 42 YS2-7o24.q1k vc_4 592 633 5830 5871 F 42 100.00 633 reject_low 4 ALIGNMENT 42 YS2-7o24.q1k vc_3 633 592 2472 2513 C 42 100.00 633 reject_low 3 ALIGNMENT 42 YS2-7o24.q1k vc_1 633 592 2472 2513 C 42 100.00 633 reject_low 2 ALIGNMENT 0 YS2-7o24.q1k vc_4 92 591 5830 5829 F 500 0.00 633 reject_low 4 ALIGNMENT 900 YS2-7p02.p1k chr10 27 1104 88331 89422 F 1078 96.10 1256 accept 0 ALIGNMENT 41 YS2-7p02.q1k chr10 83 41 90086 90128 C 43 100.00 108 accept 0 ALIGNMENT 842 YS2-7p03.p1k chr04 1204 113 336444 337539 C 1092 93.86 1371 accept 0 ALIGNMENT 0 YS2-7p03.q1k chr12 576 854 505641 505640 F 279 0.00 1236 reject_low 1 ALIGNMENT 0 YS2-7p03.q1k chr12 62 159 505226 505225 F 98 0.00 1236 reject_low 1 ALIGNMENT 911 YS2-7p03.q1k chr04 35 1121 335393 336501 F 1087 95.68 1236 accept 0 ALIGNMENT 99 YS2-7p03.q1k chr12 160 575 505226 505641 F 416 75.48 1236 reject_low 1 ALIGNMENT 161 YS2-7p04.p1k chr14 32 200 226920 227088 F 169 99.41 219 accept 0 ALIGNMENT 46 YS2-7p04.q1k chr14 80 35 227043 227088 C 46 100.00 105 accept 0 ALIGNMENT 0 YS2-7p04.p1k chr14 201 219 227088 227087 F 19 0.00 219 accept 0 ALIGNMENT 986 YS2-7p05.q1k chr04 1196 40 615102 616267 C 1157 96.28 1336 accept 0 ALIGNMENT 849 YS2-7p05.p1k chr04 31 1034 611213 612232 F 1004 96.12 1268 accept 0 ALIGNMENT 49 YS2-7p06.q1k chr16 110 36 673712 673786 C 75 66.67 110 accept 0 ALIGNMENT 971 YS2-7p06.p1k chr16 70 1203 669127 670275 F 1134 97.00 1378 accept 0 ALIGNMENT 0 YS2-7p07.q1k vc_4 62 238 5831 5830 F 177 0.00 279 reject_vc 3 ALIGNMENT 39 YS2-7p07.q1k vc_5 279 241 5025 5063 C 39 100.00 279 reject_vc 4 ALIGNMENT 41 YS2-7p07.q1k vc_1 279 239 2472 2512 C 41 100.00 279 reject_vc 0 ALIGNMENT 0 YS2-7p07.q1k vc_2 238 62 2146 2145 C 177 0.00 279 reject_vc 1 ALIGNMENT 41 YS2-7p07.q1k vc_3 279 239 2472 2512 C 41 100.00 279 reject_vc 2 ALIGNMENT 38 YS2-7p07.q1k vc_7 242 279 13525 13562 F 38 100.00 279 reject_vc 5 ALIGNMENT 41 YS2-7p07.q1k vc_2 279 239 2105 2145 C 41 100.00 279 reject_vc 1 ALIGNMENT 0 YS2-7p07.q1k vc_7 62 241 13525 13524 F 180 0.00 279 reject_vc 5 ALIGNMENT 0 YS2-7p07.q1k vc_5 240 62 37 36 C 179 0.00 279 reject_vc 6 ALIGNMENT 41 YS2-7p07.q1k vc_4 239 279 5831 5871 F 41 100.00 279 reject_vc 3 ALIGNMENT 0 YS2-7p07.q1k vc_5 240 62 5064 5063 C 179 0.00 279 reject_vc 4 ALIGNMENT 0 YS2-7p07.q1k vc_1 238 62 2513 2512 C 177 0.00 279 reject_vc 0 ALIGNMENT 0 YS2-7p07.q1k vc_3 238 62 2513 2512 C 177 0.00 279 reject_vc 2 ALIGNMENT 36 YS2-7p07.q1k vc_5 276 241 1 36 C 36 100.00 279 reject_vc 6 ALIGNMENT 41 YS2-7p08.q1k chr08 37 88 512695 512745 F 52 98.08 115 accept 0 ALIGNMENT 0 YS2-7p09.p1k scplasm1 932 87 342 341 C 846 0.00 1326 reject_low 2 ALIGNMENT 991 YS2-7p09.p1k scplasm1 29 1209 4255 5447 F 1181 95.51 1326 accept_chi 0 ALIGNMENT 482 YS2-7p09.q1k scplasm1 1 736 940 1689 F 736 89.40 940 accept_chi 1 ALIGNMENT 52 YS2-7p09.p1k scplasm1 86 29 341 398 C 58 98.28 1326 reject_low 2 ALIGNMENT 52 YS2-7p09.p1k vc_6 86 29 6352 6409 C 58 98.28 1326 reject_low 3 ALIGNMENT 0 YS2-7p09.p1k vc_6 932 87 6353 6352 C 846 0.00 1326 reject_low 3 ALIGNMENT 22 YS2-7p10.p1k chr02 140 179 646091 646130 F 40 92.50 272 reject_low 1 ALIGNMENT 182 YS2-7p10.p1k chr01 28 253 169095 169314 F 226 95.58 272 accept 0 ALIGNMENT 42 YS2-7p10.q1k chr01 91 41 169265 169314 C 51 98.04 120 accept 0 ALIGNMENT 0 YS2-7p10.p1k chr01 254 272 169314 169313 F 19 0.00 272 accept 0 ALIGNMENT 0 YS2-7p10.p1k chr02 180 272 646130 646129 F 93 0.00 272 reject_low 1 ALIGNMENT 0 YS2-7p10.p1k chr02 62 139 646091 646090 F 78 0.00 272 reject_low 1 ALIGNMENT 925 YS2-7p11.p1k chr12 1068 37 758063 759105 C 1032 97.19 1313 accept 0 ALIGNMENT 821 YS2-7p11.q1k chr12 32 985 754067 755038 F 954 96.54 1173 accept 0 ALIGNMENT 912 YS2-7p13.p1k chr08 1117 35 453953 455040 C 1083 95.84 1329 accept 0 ALIGNMENT 918 YS2-7p13.q1k chr08 36 1082 449908 450969 F 1047 96.75 1273 accept 0 ALIGNMENT 35 YS2-7p14.q1k chr15 85 37 971724 971770 C 49 95.92 111 ambiguous_trans 2 ALIGNMENT 897 YS2-7p14.p1k chr03 1106 33 228900 229993 C 1074 95.44 1192 accept 0 ALIGNMENT 35 YS2-7p14.q1k chr07 85 37 812894 812940 C 49 95.92 111 ambiguous_trans 1 ALIGNMENT 0 YS2-7p15.p1k scplasm1 126 62 2956 2955 C 65 0.00 1298 accept_chi 1 ALIGNMENT 1033 YS2-7p15.q1k scplasm1 31 1226 4336 5534 F 1196 96.07 1283 accept_chi 0 ALIGNMENT 584 YS2-7p15.p1k scplasm1 1041 127 2036 2955 C 915 88.42 1298 accept_chi 1 ALIGNMENT 996 YS2-7p17.q1k chr09 1238 41 337265 338471 C 1198 95.24 1268 accept 0 ALIGNMENT 768 YS2-7p18.p1k scplasm1 28 1183 1454 2617 F 1156 89.45 1364 accept 0 ALIGNMENT 954 YS2-7p19.q1k chr16 1192 40 154623 155795 C 1153 95.75 1270 accept 0 ALIGNMENT 746 YS2-7p19.p1k chr16 383 1305 152105 153038 F 923 94.58 1426 accept 0 ALIGNMENT 888 YS2-7p22.p1k chr02 1067 38 487823 488839 C 1030 97.09 1350 accept 0 ALIGNMENT 0 YS2-7p23.p1k chr16 201 184 432015 432014 C 18 0.00 201 accept_chi 0 ALIGNMENT 0 YS2-7p23.q1k vc_4 216 62 1535 1534 C 155 0.00 1344 reject_low 7 ALIGNMENT 0 YS2-7p23.q1k vc_1 62 216 2531 2530 F 155 0.00 1344 reject_vc 2 ALIGNMENT 0 YS2-7p23.q1k vc_5 62 216 2398 2397 F 155 0.00 1344 reject_vc 4 ALIGNMENT 0 YS2-7p23.q1k vc_4 62 216 126 125 F 155 0.00 1344 reject_low 6 ALIGNMENT 0 YS2-7p23.q1k vc_4 218 217 5872 6353 F 0 0.00 1344 reject_low 8 ALIGNMENT 0 YS2-7p23.q1k vc_4 216 62 5813 5812 C 155 0.00 1344 reject_vc 5 ALIGNMENT 85 YS2-7p23.q1k vc_4 217 358 126 266 F 142 87.32 1344 reject_low 6 ALIGNMENT 143 YS2-7p23.q1k vc_1 217 475 2531 2785 F 259 86.10 1344 reject_vc 2 ALIGNMENT 36 YS2-7p23.q1k vc_5 217 179 5025 5063 C 39 97.44 1344 reject_low 11 ALIGNMENT 85 YS2-7p23.q1k vc_4 217 358 6353 6493 F 142 87.32 1344|1,0 reject_low 8 ALIGNMENT 38 YS2-7p23.q1k vc_3 217 177 2472 2512 C 41 97.56 1344 reject_low 10 ALIGNMENT 0 YS2-7p23.q1k vc_4 62 176 5831 5830 F 115 0.00 1344 reject_low 8 ALIGNMENT 35 YS2-7p23.q1k vc_7 180 217 63 100 F 38 97.37 1344 reject_low 12 ALIGNMENT 143 YS2-7p23.q1k vc_5 217 475 2398 2652 F 259 86.10 1344 reject_vc 4 ALIGNMENT 62 YS2-7p23.q1k vc_4 301 217 1450 1534 C 85 91.76 1344 reject_low 7 ALIGNMENT 0 YS2-7p23.q1k vc_3 62 216 2531 2530 F 155 0.00 1344 reject_vc 3 ALIGNMENT 0 YS2-7p23.q1k vc_5 178 62 37 36 C 117 0.00 1344 reject_low 13 ALIGNMENT 33 YS2-7p23.q1k vc_5 214 179 1 36 C 36 97.22 1344 reject_low 13 ALIGNMENT 38 YS2-7p23.q1k vc_4 177 217 5831 5871 F 41 97.56 1344 reject_low 8 ALIGNMENT 141 YS2-7p23.q1k chr16 30 178 432014 432162 F 149 100.00 1344 accept_chi 1 ALIGNMENT 0 YS2-7p23.q1k vc_3 176 62 2513 2512 C 115 0.00 1344 reject_low 10 ALIGNMENT 141 YS2-7p23.p1k chr16 183 35 432014 432162 C 149 100.00 201 accept_chi 0 ALIGNMENT 143 YS2-7p23.q1k vc_3 217 475 2531 2785 F 259 86.10 1344 reject_vc 3 ALIGNMENT 0 YS2-7p23.q1k vc_1 176 62 2513 2512 C 115 0.00 1344 reject_low 9 ALIGNMENT 38 YS2-7p23.q1k vc_1 217 177 2472 2512 C 41 97.56 1344 reject_low 9 ALIGNMENT 0 YS2-7p23.q1k vc_7 62 179 63 62 F 118 0.00 1344 reject_low 12 ALIGNMENT 0 YS2-7p23.q1k vc_5 178 62 5064 5063 C 117 0.00 1344 reject_low 11 ALIGNMENT 136 YS2-7p23.q1k vc_4 475 217 5556 5812 C 259 85.33 1344 reject_vc 5 ALIGNMENT 240 YS2-7p24.p1k chr14 782 1171 4967 5360 F 390 88.21 1251 reject_low 6 ALIGNMENT 0 YS2-7p24.p1k chr14 767 781 4912 4966 F 15 0.00 1251 reject_low 6 ALIGNMENT 0 YS2-7p24.p1k chr05 781 767 571925 571979 C 15 0.00 1251 ambiguous_tel 5 ALIGNMENT 238 YS2-7p24.p1k chr07 1169 782 1085610 1086001 C 388 88.14 1251 reject_low 7 ALIGNMENT 267 YS2-7p24.p1k chr05 1210 782 571490 571924 C 429 88.58 1251 ambiguous_tel 5 ALIGNMENT 579 YS2-7p24.p1k chr04 766 157 1527151 1527760 C 610 98.69 1251 ambiguous_tel 4 ALIGNMENT 84 YS2-7p24.p1k chr04 140 43 1527823 1527921 C 98 95.92 1251 ambiguous_tel 4 ALIGNMENT 84 YS2-7p24.p1k chr05 43 140 4224 4322 F 98 95.92 1251 reject_low 9 ALIGNMENT 84 YS2-7p24.p1k chr15 140 43 1086988 1087086 C 98 95.92 1251 ambiguous_tel 3 ALIGNMENT 0 YS2-7p24.p1k chr12 214 784 4010 4019 F 571 0.00 1251 reject_low 12 ALIGNMENT 0 YS2-7p24.p1k chr07 156 141 1086667 1086728 C 16 0.00 1251 reject_low 7 ALIGNMENT 249 YS2-7p24.p1k chr08 1210 785 558179 558610 C 426 87.32 1251 reject_low 18 ALIGNMENT 561 YS2-7p24.p1k chr14 157 766 4302 4911 F 610 97.70 1251 reject_low 6 ALIGNMENT 561 YS2-7p24.p1k chr07 766 157 1086057 1086666 C 610 97.70 1251 reject_low 7 ALIGNMENT 599 YS2-7p24.p1k chr09 157 766 4690 5300 F 610 99.84 1251 ambiguous_tel 1 ALIGNMENT 0 YS2-7p24.p1k chr16 767 781 4821 4875 F 15 0.00 1251 reject_low 8 ALIGNMENT 167 YS2-7p24.p1k chr05 157 330 4385 4558 F 174 99.43 1251 reject_low 9 ALIGNMENT 94 YS2-7p24.p1k chr12 111 213 3907 4009 F 103 97.09 1251 reject_low 12,13 ALIGNMENT 0 YS2-7p24.p1k chr04 156 141 1527761 1527822 C 16 0.00 1251 ambiguous_tel 4 ALIGNMENT 257 YS2-7p24.p1k chr16 1210 785 943725 944157 C 426 88.03 1251 reject_low 16 ALIGNMENT 358 YS2-7p24.p1k chr12 1210 437 1066310 1067097 C 774 84.63 1251 reject_low 10 ALIGNMENT 84 YS2-7p24.p1k chr12 140 43 1067361 1067459 C 98 95.92 1251 reject_low 10 ALIGNMENT 0 YS2-7p24.p1k chr06 214 784 3047 3056 F 571 0.00 1251 reject_low 15 ALIGNMENT 258 YS2-7p24.p1k chr13 785 1210 3896 4327 F 426 88.03 1251 reject_low 14 ALIGNMENT 0 YS2-7p24.p1k chr12 214 829 9544 9543 F 616 0.00 1251 reject_low 19 ALIGNMENT 0 YS2-7p24.p1k chr09 767 781 5301 5355 F 15 0.00 1251 ambiguous_tel 1 ALIGNMENT 0 YS2-7p24.p1k chr09 141 156 4628 4689 F 16 0.00 1251 ambiguous_tel 1 ALIGNMENT 0 YS2-7p24.p1k chr04 781 767 1527096 1527150 C 15 0.00 1251 ambiguous_tel 4 ALIGNMENT 261 YS2-7p24.p1k chr15 1210 782 1085826 1086260 C 429 88.11 1251 ambiguous_tel 3 ALIGNMENT 0 YS2-7p24.p1k chr05 156 141 572590 572651 C 16 0.00 1251 ambiguous_tel 5 ALIGNMENT 0 YS2-7p24.p1k chr12 345 331 1067129 1067124 C 15 0.00 1251 reject_low 10 ALIGNMENT 561 YS2-7p24.p1k chr05 766 157 571980 572589 C 610 97.70 1251 ambiguous_tel 5 ALIGNMENT 561 YS2-7p24.p1k chr16 157 766 4211 4820 F 610 97.70 1251 reject_low 8 ALIGNMENT 0 YS2-7p24.p1k chr12 156 141 1067299 1067360 C 16 0.00 1251 reject_low 10 ALIGNMENT 258 YS2-7p24.p1k chr12 785 1210 9555 9986 F 426 88.03 1251 reject_low 13 ALIGNMENT 0 YS2-7p24.p1k chr13 214 784 3886 3895 F 571 0.00 1251 reject_low 14 ALIGNMENT 0 YS2-7p24.p1k chr12 156 141 1073962 1074023 C 16 0.00 1251 ambiguous_tel 2 ALIGNMENT 358 YS2-7p24.p1k chr05 437 1210 4586 5373 F 774 84.63 1251 reject_low 9 ALIGNMENT 0 YS2-7p24.p1k chr12 781 767 1073297 1073351 C 15 0.00 1251 ambiguous_tel 2 ALIGNMENT 84 YS2-7p24.p1k chr10 43 140 4512 4610 F 98 95.92 1251 ambiguous_tel 0 ALIGNMENT 0 YS2-7p24.p1k chr12 214 784 4010 9554 F 571 0.00 1251 reject_low 13 ALIGNMENT 84 YS2-7p24.p1k chr12 140 43 1074024 1074122 C 98 95.92 1251 ambiguous_tel 2 ALIGNMENT 0 YS2-7p24.p1k chr16 141 156 4149 4210 F 16 0.00 1251 reject_low 8 ALIGNMENT 0 YS2-7p24.p1k chr07 781 767 1086002 1086056 C 15 0.00 1251 reject_low 7 ALIGNMENT 0 YS2-7p24.p1k chr05 381 436 4590 4585 F 56 0.00 1251 reject_low 9 ALIGNMENT 94 YS2-7p24.p1k chr08 111 213 3639 3741 F 103 97.09 1251 reject_low 11 ALIGNMENT 0 YS2-7p24.p1k chr12 436 381 1067098 1067093 C 56 0.00 1251 reject_low 10 ALIGNMENT 0 YS2-7p24.p1k chr10 141 156 4611 4672 F 16 0.00 1251 ambiguous_tel 0 ALIGNMENT 258 YS2-7p24.p1k chr12 785 1210 4020 4451 F 426 88.03 1251 reject_low 12 ALIGNMENT 94 YS2-7p24.p1k chr08 213 111 558621 558723 C 103 97.09 1251 reject_low 18 ALIGNMENT 261 YS2-7p24.p1k chr12 1210 782 1072862 1073296 C 429 88.11 1251 ambiguous_tel 2 ALIGNMENT 0 YS2-7p24.p1k chr14 141 156 4240 4301 F 16 0.00 1251 reject_low 6 ALIGNMENT 579 YS2-7p24.p1k chr15 766 157 1086316 1086925 C 610 98.69 1251 ambiguous_tel 3 ALIGNMENT 84 YS2-7p24.p1k chr09 43 140 4529 4627 F 98 95.92 1251 ambiguous_tel 1 ALIGNMENT 254 YS2-7p24.p1k chr09 782 1165 5356 5743 F 384 89.84 1251 ambiguous_tel 1 ALIGNMENT 94 YS2-7p24.p1k chr16 213 111 944168 944270 C 103 97.09 1251 reject_low 16 ALIGNMENT 94 YS2-7p24.p1k chr12 111 213 9442 9544 F 103 97.09 1251 reject_low 19 ALIGNMENT 0 YS2-7p24.p1k chr08 214 784 3742 3751 F 571 0.00 1251 reject_low 11 ALIGNMENT 599 YS2-7p24.p1k chr10 157 766 4673 5283 F 610 99.84 1251 ambiguous_tel 0 ALIGNMENT 0 YS2-7p24.p1k chr15 156 141 1086926 1086987 C 16 0.00 1251 ambiguous_tel 3 ALIGNMENT 236 YS2-7p24.p1k chr16 782 1165 4876 5263 F 384 88.28 1251 reject_low 8 ALIGNMENT 29 YS2-7p24.p1k chr12 380 346 1067094 1067128 C 35 94.29 1251 reject_low 10 ALIGNMENT 579 YS2-7p24.p1k chr12 766 157 1073352 1073961 C 610 98.69 1251 ambiguous_tel 2 ALIGNMENT 0 YS2-7p24.p1k chr10 767 781 5284 5338 F 15 0.00 1251 ambiguous_tel 0 ALIGNMENT 94 YS2-7p24.p1k chr13 111 213 3783 3885 F 103 97.09 1251 reject_low 14 ALIGNMENT 0 YS2-7p24.p1k chr05 331 345 4559 4554 F 15 0.00 1251 reject_low 9 ALIGNMENT 94 YS2-7p24.p1k chr06 111 213 2944 3046 F 103 97.09 1251 reject_low 15 ALIGNMENT 240 YS2-7p24.p1k chr04 1153 782 1526720 1527095 C 372 89.25 1251 ambiguous_tel 4 ALIGNMENT 0 YS2-7p24.p1k chr15 781 767 1086261 1086315 C 15 0.00 1251 ambiguous_tel 3 ALIGNMENT 0 YS2-7p24.p1k chr16 784 214 944158 944167 C 571 0.00 1251 reject_low 16 ALIGNMENT 270 YS2-7p24.p1k chr10 782 1210 5339 5773 F 429 88.81 1251 ambiguous_tel 0 ALIGNMENT 258 YS2-7p24.p1k chr08 785 1210 3752 4183 F 426 88.03 1251 reject_low 11 ALIGNMENT 0 YS2-7p24.p1k chr02 214 784 4211 4220 F 571 0.00 1251 reject_low 17 ALIGNMENT 84 YS2-7p24.p1k chr07 140 43 1086729 1086827 C 98 95.92 1251 reject_low 7 ALIGNMENT 84 YS2-7p24.p1k chr14 43 140 4141 4239 F 98 95.92 1251 reject_low 6 ALIGNMENT 84 YS2-7p24.p1k chr05 140 43 572652 572750 C 98 95.92 1251 ambiguous_tel 5 ALIGNMENT 94 YS2-7p24.p1k chr02 111 213 4108 4210 F 103 97.09 1251 reject_low 17 ALIGNMENT 29 YS2-7p24.p1k chr05 346 380 4555 4589 F 35 94.29 1251 reject_low 9 ALIGNMENT 84 YS2-7p24.p1k chr16 43 140 4050 4148 F 98 95.92 1251 reject_low 8 ALIGNMENT 257 YS2-7p24.p1k chr06 785 1210 3057 3489 F 426 88.03 1251 reject_low 15 ALIGNMENT 249 YS2-7p24.p1k chr02 785 1210 4221 4652 F 426 87.32 1251 reject_low 17 ALIGNMENT 164 YS2-7p24.p1k chr12 330 157 1067125 1067298 C 174 98.85 1251 reject_low 10 ALIGNMENT 0 YS2-7p24.p1k chr05 141 156 4323 4384 F 16 0.00 1251 reject_low 9 ALIGNMENT 0 YS2-7p24.p1k chr08 784 214 558611 558620 C 571 0.00 1251 reject_low 18 ALIGNMENT 80 YS2-8a01.q1k chr08 107 186 116095 116174 F 80 100.00 1170 reject_low 4 ALIGNMENT 74 YS2-8a01.q1k chr10 113 186 59099 59172 F 74 100.00 1170 reject_low 14 ALIGNMENT 159 YS2-8a01.q1k chr15 226 540 226719 227036 F 315 85.08 1170 reject_low 1 ALIGNMENT 79 YS2-8a01.q1k chr15 186 108 113801 113879 C 79 100.00 1170 reject_low 6 ALIGNMENT 0 YS2-8a01.q1k chr02 824 190 266376 266375 C 635 0.00 1170 reject_low 2 ALIGNMENT 0 YS2-8a01.q1k chr10 62 112 59099 59098 F 51 0.00 1170 reject_low 14 ALIGNMENT 0 YS2-8a01.q1k chr15 541 824 854612 854611 F 284 0.00 1170 reject_low 20 ALIGNMENT 24 YS2-8a01.q1k chr15 257 294 854336 854373 F 38 92.11 1170 reject_low 20 ALIGNMENT 0 YS2-8a01.q1k chr07 62 202 735988 735987 F 141 0.00 1170 reject_low 13 ALIGNMENT 130 YS2-8a01.q1k chr02 203 540 197718 198057 F 338 81.07 1170 reject_low 9 ALIGNMENT 0 YS2-8a01.q1k chr15 62 225 226719 226718 F 164 0.00 1170 reject_low 1 ALIGNMENT 0 YS2-8a01.q1k chr15 107 62 113880 113879 C 46 0.00 1170 reject_low 6 ALIGNMENT 0 YS2-8a01.q1k chr07 62 202 845287 845286 F 141 0.00 1170 reject_low 8 ALIGNMENT 0 YS2-8a01.q1k chr08 62 106 116095 116094 F 45 0.00 1170 reject_low 4 ALIGNMENT 0 YS2-8a01.q1k chr07 508 824 845603 845602 F 317 0.00 1170 reject_low 8 ALIGNMENT 0 YS2-8a01.q1k chr14 824 187 104806 104805 C 638 0.00 1170 reject_low 15 ALIGNMENT 0 YS2-8a01.q1k chr05 824 543 249928 249927 C 282 0.00 1170 reject_low 3 ALIGNMENT 116 YS2-8a01.q1k chr09 203 540 324390 324732 F 338 79.88 1170 reject_low 18 ALIGNMENT 0 YS2-8a01.q1k chr15 824 187 113802 113801 C 638 0.00 1170 reject_low 6 ALIGNMENT 144 YS2-8a01.q1k chr05 542 203 249927 250268 C 340 82.35 1170 reject_low 3 ALIGNMENT 0 YS2-8a01.q1k chr09 284 283 205307 205297 F 0 0.00 1170 reject_low 19 ALIGNMENT 0 YS2-8a01.q1k chr09 62 202 324390 324389 F 141 0.00 1170 reject_low 18 ALIGNMENT 0 YS2-8a01.q1k chr05 202 62 250269 250268 C 141 0.00 1170 reject_low 3 ALIGNMENT 849 YS2-8a01.q1k chr15 46 1010 353972 354931 F 965 97.72 1170 accept 0 ALIGNMENT 0 YS2-8a01.q1k chr09 107 62 175107 175106 C 46 0.00 1170 reject_low 11 ALIGNMENT 76 YS2-8a01.q1k chr04 108 186 434255 434333 F 79 98.73 1170 reject_low 10 ALIGNMENT 76 YS2-8a01.q1k chr09 186 108 325746 325824 C 79 98.73 1170 reject_low 12 ALIGNMENT 0 YS2-8a01.q1k chr14 62 112 560693 560692 F 51 0.00 1170 reject_low 16 ALIGNMENT 132 YS2-8a01.q1k chr07 203 507 845287 845603 F 305 82.62 1170 reject_low 8 ALIGNMENT 0 YS2-8a01.q1k chr04 541 824 668431 668430 F 284 0.00 1170 reject_low 7 ALIGNMENT 0 YS2-8a01.q1k chr09 107 62 325825 325824 C 46 0.00 1170 reject_low 12 ALIGNMENT 0 YS2-8a01.q1k chr14 187 824 560766 560765 F 638 0.00 1170 reject_low 16 ALIGNMENT 23 YS2-8a01.q1k chr09 257 283 205280 205306 F 27 100.00 1170 reject_low 19 ALIGNMENT 0 YS2-8a01.q1k chr09 824 187 325747 325746 C 638 0.00 1170 reject_low 12 ALIGNMENT 0 YS2-8a01.q1k chr02 62 202 197718 197717 F 141 0.00 1170 reject_low 9 ALIGNMENT 127 YS2-8a01.q1k chr07 203 540 735988 736327 F 338 80.77 1170 reject_low 13 ALIGNMENT 0 YS2-8a01.q1k chr07 541 824 736327 736326 F 284 0.00 1170 reject_low 13 ALIGNMENT 82 YS2-8a01.q1k chr02 189 108 266375 266456 C 82 100.00 1170 reject_low 2 ALIGNMENT 0 YS2-8a01.q1k chr03 824 187 295481 295480 C 638 0.00 1170 reject_low 5 ALIGNMENT 126 YS2-8a01.q1k chr16 257 540 856604 856881 F 284 84.15 1170 reject_low 17 ALIGNMENT 0 YS2-8a01.q1k chr16 541 824 856881 856880 F 284 0.00 1170 reject_low 17 ALIGNMENT 0 YS2-8a01.q1k chr15 295 314 854374 854384 F 20 0.00 1170 reject_low 20 ALIGNMENT 0 YS2-8a01.q1k chr16 62 256 856604 856603 F 195 0.00 1170 reject_low 17 ALIGNMENT 0 YS2-8a01.q1k chr09 62 256 205280 205279 F 195 0.00 1170 reject_low 19 ALIGNMENT 0 YS2-8a01.q1k chr09 541 824 324732 324731 F 284 0.00 1170 reject_low 18 ALIGNMENT 0 YS2-8a01.q1k chr09 824 187 175029 175028 C 638 0.00 1170 reject_low 11 ALIGNMENT 74 YS2-8a01.q1k chr14 186 113 104805 104878 C 74 100.00 1170 reject_low 15 ALIGNMENT 124 YS2-8a01.q1k chr15 315 540 854385 854612 F 226 86.28 1170 reject_low 20 ALIGNMENT 79 YS2-8a01.q1k chr03 186 108 295480 295558 C 79 100.00 1170 reject_low 5 ALIGNMENT 0 YS2-8a01.q1k chr04 62 107 434255 434254 F 46 0.00 1170 reject_low 10 ALIGNMENT 76 YS2-8a01.q1k chr09 186 108 175028 175106 C 79 98.73 1170 reject_low 11 ALIGNMENT 0 YS2-8a01.q1k chr03 107 62 295559 295558 C 46 0.00 1170 reject_low 5 ALIGNMENT 125 YS2-8a01.q1k chr09 284 540 205298 205556 F 257 84.05 1170 reject_low 19 ALIGNMENT 0 YS2-8a01.q1k chr09 541 824 205556 205555 F 284 0.00 1170 reject_low 19 ALIGNMENT 74 YS2-8a01.q1k chr14 113 186 560693 560766 F 74 100.00 1170 reject_low 16 ALIGNMENT 133 YS2-8a01.q1k chr04 203 540 668092 668431 F 338 81.36 1170 reject_low 7 ALIGNMENT 0 YS2-8a01.q1k chr15 541 824 227036 227035 F 284 0.00 1170 reject_low 1 ALIGNMENT 0 YS2-8a01.q1k chr10 187 824 59172 59171 F 638 0.00 1170 reject_low 14 ALIGNMENT 0 YS2-8a01.q1k chr04 187 824 434333 434332 F 638 0.00 1170 reject_low 10 ALIGNMENT 0 YS2-8a01.q1k chr08 187 824 116174 116173 F 638 0.00 1170 reject_low 4 ALIGNMENT 0 YS2-8a01.q1k chr15 62 256 854336 854335 F 195 0.00 1170 reject_low 20 ALIGNMENT 0 YS2-8a01.q1k chr04 62 202 668092 668091 F 141 0.00 1170 reject_low 7 ALIGNMENT 0 YS2-8a01.q1k chr02 541 824 198057 198056 F 284 0.00 1170 reject_low 9 ALIGNMENT 0 YS2-8a01.q1k chr14 112 62 104879 104878 C 51 0.00 1170 reject_low 15 ALIGNMENT 909 YS2-8a01.p1k chr15 1112 51 356603 357667 C 1062 95.86 1189 accept 0 ALIGNMENT 0 YS2-8a01.q1k chr02 107 62 266457 266456 C 46 0.00 1170 reject_low 2 ALIGNMENT 94 YS2-8a02.q1k vc_4 919 1084 6353 6514 F 166 87.35 1210|1,0 reject_low 7 ALIGNMENT 650 YS2-8a02.q1k chr12 143 879 849467 850194 F 737 97.56 1210 accept 0 ALIGNMENT 63 YS2-8a02.q1k vc_4 1007 919 1446 1534 C 89 91.01 1210 reject_low 8 ALIGNMENT 102 YS2-8a02.q1k vc_5 919 1120 2398 2590 F 202 86.63 1210 reject_low 4 ALIGNMENT 0 YS2-8a02.q1k vc_3 881 212 2510 2509 C 670 0.00 1210 reject_low 10 ALIGNMENT 35 YS2-8a02.q1k vc_1 919 882 2472 2509 C 38 97.37 1210 reject_low 9 ALIGNMENT 0 YS2-8a02.q1k vc_5 881 212 5063 5062 C 670 0.00 1210 reject_low 11 ALIGNMENT 32 YS2-8a02.q1k vc_5 916 882 1 35 C 35 97.14 1210 reject_low 12 ALIGNMENT 0 YS2-8a02.q1k vc_5 212 918 2398 2397 F 707 0.00 1210 reject_low 4 ALIGNMENT 0 YS2-8a02.q1k vc_3 212 918 2531 2530 F 707 0.00 1210 reject_low 2 ALIGNMENT 102 YS2-8a02.q1k vc_7 1120 919 2535 2727 C 202 86.63 1210 reject_low 5 ALIGNMENT 35 YS2-8a02.q1k vc_3 919 882 2472 2509 C 38 97.37 1210 reject_low 10 ALIGNMENT 0 YS2-8a02.q1k vc_5 881 212 36 35 C 670 0.00 1210 reject_low 12 ALIGNMENT 0 YS2-8a02.q1k vc_1 881 212 2510 2509 C 670 0.00 1210 reject_low 9 ALIGNMENT 102 YS2-8a02.q1k vc_4 1120 919 5620 5812 C 202 86.63 1210 reject_low 3 ALIGNMENT 102 YS2-8a02.q1k vc_3 919 1120 2531 2723 F 202 86.63 1210 reject_low 2 ALIGNMENT 0 YS2-8a02.q1k vc_4 918 212 1535 1534 C 707 0.00 1210 reject_low 8 ALIGNMENT 0 YS2-8a02.q1k vc_7 918 212 2728 2727 C 707 0.00 1210 reject_low 5 ALIGNMENT 0 YS2-8a02.q1k vc_4 920 919 5872 6353 F 0 0.00 1210 reject_low 7 ALIGNMENT 94 YS2-8a02.q1k vc_4 919 1084 126 287 F 166 87.35 1210 reject_low 6 ALIGNMENT 0 YS2-8a02.q1k vc_4 212 918 126 125 F 707 0.00 1210 reject_low 6 ALIGNMENT 0 YS2-8a02.q1k vc_1 212 918 2531 2530 F 707 0.00 1210 reject_low 1 ALIGNMENT 0 YS2-8a02.q1k vc_4 918 212 5813 5812 C 707 0.00 1210 reject_low 3 ALIGNMENT 35 YS2-8a02.q1k vc_4 882 919 5834 5871 F 38 97.37 1210 reject_low 7 ALIGNMENT 35 YS2-8a02.q1k vc_5 919 882 5025 5062 C 38 97.37 1210 reject_low 11 ALIGNMENT 102 YS2-8a02.q1k vc_1 919 1120 2531 2723 F 202 86.63 1210 reject_low 1 ALIGNMENT 0 YS2-8a02.q1k vc_4 212 881 5834 5833 F 670 0.00 1210 reject_low 7 ALIGNMENT 47 YS2-8a04.q1k chrm 205 272 80497 80564 F 68 91.18 414 reject_low 10 ALIGNMENT 0 YS2-8a04.q1k chrm 62 207 64514 64513 F 146 0.00 414 reject_low 12 ALIGNMENT 0 YS2-8a04.q1k chrm 414 291 56993 56992 C 124 0.00 414 reject_low 9 ALIGNMENT 0 YS2-8a04.q1k chrm 62 208 34933 34932 F 147 0.00 414 reject_low 14 ALIGNMENT 34 YS2-8a04.q1k chrm 209 252 9030 9073 F 44 95.45 414 reject_low 15 ALIGNMENT 0 YS2-8a04.q1k chrm 414 280 12242 12241 C 135 0.00 414 reject_low 13 ALIGNMENT 0 YS2-8a04.q1k chrm 208 62 12313 12312 C 147 0.00 414 reject_low 13 ALIGNMENT 344 YS2-8a04.p1k vc_7 1 487 13918 14410 F 487 90.97 548 reject_vc 7 ALIGNMENT 33 YS2-8a04.q1k chrm 201 295 52762 52857 F 95 80.00 414 reject_low 11 ALIGNMENT 0 YS2-8a04.q1k chrm 296 414 52857 52856 F 119 0.00 414 reject_low 11 ALIGNMENT 0 YS2-8a04.q1k chrm 62 208 9030 9029 F 147 0.00 414 reject_low 15 ALIGNMENT 0 YS2-8a04.q1k chrm 253 414 9073 9072 F 162 0.00 414 reject_low 15 ALIGNMENT 350 YS2-8a04.p1k vc_2 487 1 1257 1749 C 487 91.38 548 reject_vc 2 ALIGNMENT 350 YS2-8a04.p1k vc_3 487 1 1257 1749 C 487 91.38 548 reject_vc 3 ALIGNMENT 38 YS2-8a04.q1k vc_7 377 414 13525 13562 F 38 100.00 414 reject_low 8 ALIGNMENT 42 YS2-8a04.q1k chrm 290 211 56992 57071 C 80 86.25 414 reject_low 9 ALIGNMENT 350 YS2-8a04.p1k vc_5 487 1 4177 4669 C 487 91.38 548 reject_vc 4 ALIGNMENT 0 YS2-8a04.q1k chrm 258 414 34981 34980 F 157 0.00 414 reject_low 14 ALIGNMENT 0 YS2-8a04.q1k chrm 62 204 80497 80496 F 143 0.00 414 reject_low 10 ALIGNMENT 38 YS2-8a04.q1k chrm 209 257 34933 34981 F 49 93.88 414 reject_low 14 ALIGNMENT 344 YS2-8a04.p1k vc_7 1 487 456 948 F 487 90.97 548 reject_vc 6 ALIGNMENT 0 YS2-8a04.q1k chrm 375 414 43260 43259 F 40 0.00 414 accept 0 ALIGNMENT 350 YS2-8a04.p1k vc_6 1 487 3712 4204 F 487 91.38 548 reject_vc 5 ALIGNMENT 283 YS2-8a04.q1k chrm 39 374 42926 43260 F 336 99.70 414 accept 0 ALIGNMENT 45 YS2-8a04.q1k chrm 279 209 12241 12312 C 71 88.73 414 reject_low 13 ALIGNMENT 0 YS2-8a04.q1k chrm 62 200 52762 52761 F 139 0.00 414 reject_low 11 ALIGNMENT 0 YS2-8a04.q1k chrm 210 62 57072 57071 C 149 0.00 414 reject_low 9 ALIGNMENT 0 YS2-8a04.q1k chrm 273 414 80564 80563 F 142 0.00 414 reject_low 10 ALIGNMENT 0 YS2-8a04.q1k chrm 277 414 64583 64582 F 138 0.00 414 reject_low 12 ALIGNMENT 350 YS2-8a04.p1k vc_1 487 1 1257 1749 C 487 91.38 548 reject_vc 1 ALIGNMENT 0 YS2-8a04.q1k vc_7 62 376 13525 13524 F 315 0.00 414 reject_low 8 ALIGNMENT 46 YS2-8a04.q1k chrm 208 276 64514 64583 F 69 91.30 414 reject_low 12 ALIGNMENT 956 YS2-8a05.q1k chr05 28 1151 320804 321935 F 1124 96.09 1192 accept 0 ALIGNMENT 1000 YS2-8a07.q1k chr11 38 1223 177934 179118 F 1186 95.70 1225 accept 0 ALIGNMENT 985 YS2-8a07.p1k chr11 1191 31 177988 179147 C 1161 95.78 1258 accept 0 ALIGNMENT 1003 YS2-8a09.p1k chr11 33 1229 68040 69236 F 1197 95.07 1291 accept 0 ALIGNMENT 961 YS2-8a09.q1k chr11 1097 39 68384 69450 C 1059 97.17 1185 accept 0 ALIGNMENT 145 YS2-8a11.p1k vc_1 1165 918 1855 2105 C 248 87.90 1245 reject_low 2 ALIGNMENT 0 YS2-8a11.p1k vc_1 917 62 2106 2105 C 856 0.00 1245 reject_low 2 ALIGNMENT 0 YS2-8a11.q1k vc_5 906 108 5064 5063 C 799 0.00 1266 reject_low 12 ALIGNMENT 26 YS2-8a11.p1k vc_1 948 918 2441 2472 C 31 96.77 1245 reject_low 9 ALIGNMENT 145 YS2-8a11.p1k vc_7 918 1165 100 350 F 248 87.90 1245 reject_low 7 ALIGNMENT 27 YS2-8a11.q1k vc_5 942 907 1 36 C 36 91.67 1266 reject_low 13 ALIGNMENT 0 YS2-8a11.p1k vc_1 917 62 2473 2472 C 856 0.00 1245 reject_low 9 ALIGNMENT 0 YS2-8a11.p1k vc_7 62 917 13562 13561 F 856 0.00 1245 reject_low 8 ALIGNMENT 145 YS2-8a11.p1k vc_4 918 1165 5871 6121 F 248 87.90 1245 reject_low 5 ALIGNMENT 0 YS2-8a11.p1k chr08 926 901 319972 319971 C 26 0.00 1245 accept_chi 0 ALIGNMENT 145 YS2-8a11.p1k vc_3 1165 918 1855 2105 C 248 87.90 1245 reject_low 4 ALIGNMENT 26 YS2-8a11.p1k vc_3 948 918 2441 2472 C 31 96.77 1245 reject_low 10 ALIGNMENT 694 YS2-8a11.q1k chr08 29 900 319971 320842 F 872 93.69 1266 accept_chi 1 ALIGNMENT 30 YS2-8a11.q1k vc_4 905 943 5831 5869 F 39 92.31 1266 reject_low 11 ALIGNMENT 838 YS2-8a11.p1k chr08 900 26 319971 320847 C 875 99.09 1245 accept_chi 0 ALIGNMENT 0 YS2-8a11.q1k vc_5 906 108 37 36 C 799 0.00 1266 reject_low 13 ALIGNMENT 0 YS2-8a11.p1k vc_3 917 62 2473 2472 C 856 0.00 1245 reject_low 10 ALIGNMENT 0 YS2-8a11.p1k vc_4 62 917 5871 5870 F 856 0.00 1245 reject_low 5 ALIGNMENT 28 YS2-8a11.q1k vc_5 943 907 5027 5063 C 37 91.89 1266 reject_low 12 ALIGNMENT 0 YS2-8a11.q1k vc_4 108 904 5831 5830 F 797 0.00 1266 reject_low 11 ALIGNMENT 145 YS2-8a11.p1k vc_7 918 1165 13562 13812 F 248 87.90 1245 reject_low 8 ALIGNMENT 0 YS2-8a11.p1k vc_3 917 62 2106 2105 C 856 0.00 1245 reject_low 4 ALIGNMENT 0 YS2-8a11.p1k vc_5 917 62 5026 5025 C 856 0.00 1245 reject_low 6 ALIGNMENT 0 YS2-8a11.p1k vc_7 62 917 100 99 F 856 0.00 1245 reject_low 7 ALIGNMENT 145 YS2-8a11.p1k vc_2 1165 918 1855 2105 C 248 87.90 1245 reject_low 3 ALIGNMENT 0 YS2-8a11.p1k vc_2 917 62 2106 2105 C 856 0.00 1245 reject_low 3 ALIGNMENT 145 YS2-8a11.p1k vc_5 1165 918 4775 5025 C 248 87.90 1245 reject_low 6 ALIGNMENT 1010 YS2-8a12.q1k chr15 40 1220 795895 797082 F 1181 95.85 1248 accept 0 ALIGNMENT 831 YS2-8a12.p1k chr15 1178 66 799125 800251 C 1113 92.63 1208 accept 0 ALIGNMENT 0 YS2-8a14.p1k chr04 62 311 169823 169822 F 250 0.00 1336 accept 0 ALIGNMENT 23 YS2-8a14.p1k chr04 312 349 169823 169860 F 38 97.37 1336 accept 0 ALIGNMENT 0 YS2-8a14.p1k chr04 350 925 169860 169859 F 576 0.00 1336 accept 0 ALIGNMENT 0 YS2-8a15.q1k vc_7 62 399 13525 13524 F 338 0.00 437 reject_low 7 ALIGNMENT 42 YS2-8a15.q1k vc_3 437 396 2472 2513 C 42 100.00 437 reject_low 4 ALIGNMENT 0 YS2-8a15.p1k chr11 405 388 627691 627690 C 18 0.00 405 accept_chi 1 ALIGNMENT 0 YS2-8a15.q1k chr11 397 437 628048 628047 F 41 0.00 437 accept_chi 0 ALIGNMENT 0 YS2-8a15.q1k vc_1 395 62 2514 2513 C 334 0.00 437 reject_low 2 ALIGNMENT 42 YS2-8a15.q1k vc_4 396 437 5830 5871 F 42 100.00 437 reject_low 5 ALIGNMENT 0 YS2-8a15.q1k vc_3 395 62 2514 2513 C 334 0.00 437 reject_low 4 ALIGNMENT 0 YS2-8a15.q1k vc_5 398 62 37 36 C 337 0.00 437 reject_low 8 ALIGNMENT 39 YS2-8a15.q1k vc_5 437 399 5025 5063 C 39 100.00 437 reject_low 6 ALIGNMENT 42 YS2-8a15.q1k vc_2 437 396 2105 2146 C 42 100.00 437 reject_low 3 ALIGNMENT 330 YS2-8a15.p1k chr11 387 34 627690 628043 C 354 98.87 405 accept_chi 1 ALIGNMENT 38 YS2-8a15.q1k vc_7 400 437 13525 13562 F 38 100.00 437 reject_low 7 ALIGNMENT 42 YS2-8a15.q1k vc_1 437 396 2472 2513 C 42 100.00 437 reject_low 2 ALIGNMENT 36 YS2-8a15.q1k vc_5 434 399 1 36 C 36 100.00 437 reject_low 8 ALIGNMENT 0 YS2-8a15.q1k vc_4 62 395 5830 5829 F 334 0.00 437 reject_low 5 ALIGNMENT 0 YS2-8a15.q1k vc_5 398 62 5064 5063 C 337 0.00 437 reject_low 6 ALIGNMENT 342 YS2-8a15.q1k chr11 38 396 627690 628048 F 359 99.44 437 accept_chi 0 ALIGNMENT 0 YS2-8a15.q1k vc_2 395 62 2147 2146 C 334 0.00 437 reject_low 3 ALIGNMENT 42 YS2-8a16.q1k vc_4 685 727 5829 5871 F 43 100.00 727 reject_low 5 ALIGNMENT 0 YS2-8a16.q1k vc_1 684 62 2515 2514 C 623 0.00 727 reject_low 2 ALIGNMENT 38 YS2-8a16.q1k vc_7 690 727 13525 13562 F 38 100.00 727 reject_low 7 ALIGNMENT 42 YS2-8a16.q1k vc_2 727 685 2105 2147 C 43 100.00 727 reject_low 3 ALIGNMENT 42 YS2-8a16.q1k vc_1 727 685 2472 2514 C 43 100.00 727 reject_low 2 ALIGNMENT 0 YS2-8a16.q1k vc_5 688 62 5064 5063 C 627 0.00 727 reject_low 6 ALIGNMENT 39 YS2-8a16.q1k vc_5 727 689 5025 5063 C 39 100.00 727 reject_low 6 ALIGNMENT 0 YS2-8a16.q1k vc_4 62 684 5829 5828 F 623 0.00 727 reject_low 5 ALIGNMENT 616 YS2-8a16.p1k chr16 678 31 155491 156140 C 648 99.54 695 accept_chi 1 ALIGNMENT 0 YS2-8a16.p1k chr16 695 679 155492 155491 C 17 0.00 695 accept_chi 1 ALIGNMENT 0 YS2-8a16.q1k vc_3 684 62 2515 2514 C 623 0.00 727 reject_low 4 ALIGNMENT 0 YS2-8a16.q1k chr16 687 727 156140 156139 F 41 0.00 727 accept_chi 0 ALIGNMENT 36 YS2-8a16.q1k vc_5 724 689 1 36 C 36 100.00 727 reject_low 8 ALIGNMENT 0 YS2-8a16.q1k vc_7 62 689 13525 13524 F 628 0.00 727 reject_low 7 ALIGNMENT 42 YS2-8a16.q1k vc_3 727 685 2472 2514 C 43 100.00 727 reject_low 4 ALIGNMENT 620 YS2-8a16.q1k chr16 38 686 155491 156140 F 649 99.69 727 accept_chi 0 ALIGNMENT 0 YS2-8a16.q1k vc_5 688 62 37 36 C 627 0.00 727 reject_low 8 ALIGNMENT 0 YS2-8a16.q1k vc_2 684 62 2148 2147 C 623 0.00 727 reject_low 3 ALIGNMENT 38 YS2-8a17.q1k vc_7 681 718 13525 13562 F 38 100.00 718 reject_low 5 ALIGNMENT 0 YS2-8a17.p1k chr16 697 681 155492 155491 C 17 0.00 697 accept 0 ALIGNMENT 0 YS2-8a17.q1k vc_4 62 675 5829 5828 F 614 0.00 718 reject_low 3 ALIGNMENT 0 YS2-8a17.q1k vc_7 62 680 13525 13524 F 619 0.00 718 reject_low 5 ALIGNMENT 39 YS2-8a17.q1k vc_5 718 680 5025 5063 C 39 100.00 718 reject_low 4 ALIGNMENT 42 YS2-8a17.q1k vc_4 676 718 5829 5871 F 43 100.00 718 reject_low 3 ALIGNMENT 619 YS2-8a17.p1k chr16 680 31 155491 156140 C 650 99.54 697 accept 0 ALIGNMENT 0 YS2-8a17.q1k vc_3 675 62 2515 2514 C 614 0.00 718 reject_low 2 ALIGNMENT 0 YS2-8a17.q1k vc_1 675 62 2515 2514 C 614 0.00 718 reject_low 1 ALIGNMENT 0 YS2-8a17.q1k vc_5 679 62 5064 5063 C 618 0.00 718 reject_low 4 ALIGNMENT 42 YS2-8a17.q1k vc_3 718 676 2472 2514 C 43 100.00 718 reject_low 2 ALIGNMENT 0 YS2-8a17.q1k vc_5 679 62 37 36 C 618 0.00 718 reject_low 6 ALIGNMENT 626 YS2-8a17.q1k chr16 27 677 155490 156140 F 651 99.85 718 accept 0 ALIGNMENT 0 YS2-8a17.q1k chr16 678 718 156140 156139 F 41 0.00 718 accept 0 ALIGNMENT 36 YS2-8a17.q1k vc_5 715 680 1 36 C 36 100.00 718 reject_low 6 ALIGNMENT 42 YS2-8a17.q1k vc_1 718 676 2472 2514 C 43 100.00 718 reject_low 1 ALIGNMENT 1033 YS2-8a18.q1k chr07 39 1202 282631 283799 F 1164 96.91 1221 accept 0 ALIGNMENT 0 YS2-8a20.q1k vc_4 62 649 5831 5830 F 588 0.00 690 reject_low 4 ALIGNMENT 41 YS2-8a20.q1k vc_1 690 650 2472 2512 C 41 100.00 690 reject_low 2 ALIGNMENT 0 YS2-8a20.q1k chr14 651 690 637261 637260 F 40 0.00 690 accept_chi 1 ALIGNMENT 41 YS2-8a20.q1k vc_3 690 650 2472 2512 C 41 100.00 690 reject_low 3 ALIGNMENT 602 YS2-8a20.q1k chr14 30 650 636640 637261 F 621 99.84 690 accept_chi 1 ALIGNMENT 602 YS2-8a20.p1k chr14 649 29 636640 637261 C 621 99.84 668 accept_chi 0 ALIGNMENT 0 YS2-8a20.q1k vc_5 651 62 37 36 C 590 0.00 690 reject_low 7 ALIGNMENT 0 YS2-8a20.q1k vc_1 649 62 2513 2512 C 588 0.00 690 reject_low 2 ALIGNMENT 0 YS2-8a20.q1k vc_7 62 652 13525 13524 F 591 0.00 690 reject_low 6 ALIGNMENT 0 YS2-8a20.q1k vc_5 651 62 5064 5063 C 590 0.00 690 reject_low 5 ALIGNMENT 36 YS2-8a20.q1k vc_5 687 652 1 36 C 36 100.00 690 reject_low 7 ALIGNMENT 39 YS2-8a20.q1k vc_5 690 652 5025 5063 C 39 100.00 690 reject_low 5 ALIGNMENT 0 YS2-8a20.p1k chr14 668 650 636641 636640 C 19 0.00 668 accept_chi 0 ALIGNMENT 38 YS2-8a20.q1k vc_7 653 690 13525 13562 F 38 100.00 690 reject_low 6 ALIGNMENT 0 YS2-8a20.q1k vc_3 649 62 2513 2512 C 588 0.00 690 reject_low 3 ALIGNMENT 41 YS2-8a20.q1k vc_4 650 690 5831 5871 F 41 100.00 690 reject_low 4 ALIGNMENT 0 YS2-8a21.q1k vc_3 488 62 2513 2512 C 427 0.00 529 reject_low 4 ALIGNMENT 391 YS2-8a21.q1k chrm 40 488 23281 23729 F 449 100.00 529 accept_chi 1 ALIGNMENT 41 YS2-8a21.q1k vc_4 489 529 5831 5871 F 41 100.00 529 reject_low 5 ALIGNMENT 391 YS2-8a21.p1k chrm 480 32 23281 23729 C 449 100.00 499 accept_chi 0 ALIGNMENT 0 YS2-8a21.q1k vc_1 488 62 2513 2512 C 427 0.00 529 reject_low 2 ALIGNMENT 38 YS2-8a21.q1k vc_7 492 529 13525 13562 F 38 100.00 529 reject_low 6 ALIGNMENT 0 YS2-8a21.p1k chrm 499 481 23282 23281 C 19 0.00 499 accept_chi 0 ALIGNMENT 0 YS2-8a21.q1k vc_7 62 491 13525 13524 F 430 0.00 529 reject_low 6 ALIGNMENT 41 YS2-8a21.q1k vc_2 529 489 2105 2145 C 41 100.00 529 reject_low 3 ALIGNMENT 41 YS2-8a21.q1k vc_3 529 489 2472 2512 C 41 100.00 529 reject_low 4 ALIGNMENT 0 YS2-8a21.q1k vc_4 62 488 5831 5830 F 427 0.00 529 reject_low 5 ALIGNMENT 0 YS2-8a21.q1k chrm 489 529 23729 23728 F 41 0.00 529 accept_chi 1 ALIGNMENT 0 YS2-8a21.q1k vc_2 488 62 2146 2145 C 427 0.00 529 reject_low 3 ALIGNMENT 41 YS2-8a21.q1k vc_1 529 489 2472 2512 C 41 100.00 529 reject_low 2 ALIGNMENT 907 YS2-8a22.p1k chr08 1099 34 31469 32542 C 1066 96.06 1236 accept 0 ALIGNMENT 931 YS2-8a22.q1k chr08 30 1122 30807 31907 F 1093 96.25 1122 accept 0 ALIGNMENT 0 YS2-8a23.p1k chr05 200 217 482996 482995 F 18 0.00 217 accept 0 ALIGNMENT 107 YS2-8a23.p1k chr05 60 199 482860 482996 F 140 94.29 217 accept 0 ALIGNMENT 153 YS2-8b01.p1k chr06 352 57 161822 162120 C 296 86.15 1275 reject_low 13 ALIGNMENT 872 YS2-8b01.p1k chr13 1095 34 462389 463467 C 1062 96.05 1275 accept 0 ALIGNMENT 153 YS2-8b01.p1k chr15 352 57 980279 980577 C 296 86.15 1275 reject_low 14 ALIGNMENT 0 YS2-8b01.p1k chr06 829 353 161823 161822 C 477 0.00 1275 reject_low 13 ALIGNMENT 0 YS2-8b01.p1k chr15 62 248 594714 594713 F 187 0.00 1275 reject_low 26 ALIGNMENT 148 YS2-8b01.p1k chr07 57 352 541361 541665 F 296 85.81 1275 reject_low 18 ALIGNMENT 0 YS2-8b01.p1k chr07 325 829 115221 115220 F 505 0.00 1275 reject_low 2 ALIGNMENT 151 YS2-8b01.p1k chr04 57 352 802909 803206 F 296 86.15 1275 reject_low 15 ALIGNMENT 179 YS2-8b01.p1k chr07 57 324 114952 115221 F 268 91.04 1275 reject_low 2 ALIGNMENT 0 YS2-8b01.p1k chr03 321 829 151792 151791 F 509 0.00 1275 reject_low 12 ALIGNMENT 882 YS2-8b01.q1k chr13 37 1034 459528 460519 F 998 97.70 1192 accept 0 ALIGNMENT 165 YS2-8b01.p1k chr07 57 352 535224 535522 F 296 87.50 1275 reject_low 9 ALIGNMENT 0 YS2-8b01.p1k chr03 62 92 149525 149524 F 31 0.00 1275 reject_low 25 ALIGNMENT 0 YS2-8b01.p1k chr15 294 829 594759 594758 F 536 0.00 1275 reject_low 26 ALIGNMENT 151 YS2-8b01.p1k chr12 352 57 818097 818394 C 296 85.81 1275 reject_low 16 ALIGNMENT 0 YS2-8b01.p1k chr15 829 353 980280 980279 C 477 0.00 1275 reject_low 14 ALIGNMENT 0 YS2-8b01.p1k chr07 62 255 817290 817289 F 194 0.00 1275 reject_low 27 ALIGNMENT 0 YS2-8b01.p1k chr07 304 829 817338 817337 F 526 0.00 1275 reject_low 27 ALIGNMENT 117 YS2-8b01.p1k chr01 352 59 160263 160564 C 294 82.31 1275 reject_low 22 ALIGNMENT 65 YS2-8b01.p1k chr03 93 320 149525 149751 F 228 80.26 1275 reject_low 25 ALIGNMENT 159 YS2-8b01.p1k chr07 57 352 401971 402269 F 296 86.82 1275 reject_low 10 ALIGNMENT 0 YS2-8b01.p1k chr07 353 829 402269 402268 F 477 0.00 1275 reject_low 10 ALIGNMENT 0 YS2-8b01.p1k chr03 321 829 149751 149750 F 509 0.00 1275 reject_low 25 ALIGNMENT 0 YS2-8b01.p1k chr02 353 829 259883 259882 F 477 0.00 1275 reject_low 8 ALIGNMENT 0 YS2-8b01.p1k chr07 829 353 817423 817422 C 477 0.00 1275 reject_low 4 ALIGNMENT 165 YS2-8b01.p1k chr02 57 352 259585 259883 F 296 87.50 1275 reject_low 8 ALIGNMENT 168 YS2-8b01.p1k chr15 57 352 600412 600710 F 296 87.84 1275 reject_low 6 ALIGNMENT 0 YS2-8b01.p1k chr07 353 829 541665 541664 F 477 0.00 1275 reject_low 18 ALIGNMENT 145 YS2-8b01.p1k chr15 57 352 117711 118015 F 296 85.47 1275 reject_low 19 ALIGNMENT 117 YS2-8b01.p1k chr01 352 59 165851 166152 C 294 82.31 1275 reject_low 23 ALIGNMENT 0 YS2-8b01.p1k chr01 829 353 160264 160263 C 477 0.00 1275 reject_low 22 ALIGNMENT 168 YS2-8b01.p1k chr15 57 352 594830 595128 F 296 87.84 1275 reject_low 5 ALIGNMENT 0 YS2-8b01.p1k chr12 829 353 818098 818097 C 477 0.00 1275 reject_low 16 ALIGNMENT 0 YS2-8b01.p1k chr07 353 829 535522 535521 F 477 0.00 1275 reject_low 9 ALIGNMENT 0 YS2-8b01.p1k chr16 325 829 560757 560756 F 505 0.00 1275 reject_low 11 ALIGNMENT 163 YS2-8b01.p1k chr16 57 324 560487 560757 F 268 89.18 1275 reject_low 11 ALIGNMENT 0 YS2-8b01.p1k chr04 356 829 1175618 1175617 F 474 0.00 1275 reject_low 3 ALIGNMENT 0 YS2-8b01.p1k chr03 829 353 124156 124155 C 477 0.00 1275 reject_low 17 ALIGNMENT 28 YS2-8b01.p1k chr07 256 303 817290 817338 F 48 87.50 1275 reject_low 27 ALIGNMENT 144 YS2-8b01.p1k chr03 304 59 142819 143066 C 246 88.21 1275 reject_low 20 ALIGNMENT 134 YS2-8b01.p1k chr13 57 322 504354 504621 F 266 85.71 1275 reject_low 21 ALIGNMENT 0 YS2-8b01.p1k chr15 353 829 118015 118014 F 477 0.00 1275 reject_low 19 ALIGNMENT 0 YS2-8b01.p1k chr15 353 829 595128 595127 F 477 0.00 1275 reject_low 5 ALIGNMENT 157 YS2-8b01.p1k chr04 60 355 1175320 1175618 F 296 86.49 1275 reject_low 3 ALIGNMENT 29 YS2-8b01.p1k chr15 249 293 594714 594759 F 45 88.89 1275 reject_low 26 ALIGNMENT 163 YS2-8b01.p1k chr03 57 320 151527 151792 F 264 89.77 1275 reject_low 12 ALIGNMENT 168 YS2-8b01.p1k chr07 352 57 817422 817720 C 296 87.84 1275 reject_low 4 ALIGNMENT 0 YS2-8b01.p1k chr07 350 829 735850 735849 F 480 0.00 1275 reject_low 1 ALIGNMENT 150 YS2-8b01.p1k chr03 352 57 124155 124453 C 296 85.81 1275 reject_low 17 ALIGNMENT 0 YS2-8b01.p1k chr13 323 829 504621 504620 F 507 0.00 1275 reject_low 21 ALIGNMENT 0 YS2-8b01.p1k chr01 829 353 165852 165851 C 477 0.00 1275 reject_low 23 ALIGNMENT 0 YS2-8b01.p1k chr03 829 305 142820 142819 C 525 0.00 1275 reject_low 20 ALIGNMENT 0 YS2-8b01.p1k chr03 829 353 168620 168619 C 477 0.00 1275 reject_low 24 ALIGNMENT 165 YS2-8b01.p1k chr02 57 352 226633 226931 F 296 87.50 1275 reject_low 7 ALIGNMENT 0 YS2-8b01.p1k chr15 353 829 600710 600709 F 477 0.00 1275 reject_low 6 ALIGNMENT 0 YS2-8b01.p1k chr02 353 829 226931 226930 F 477 0.00 1275 reject_low 7 ALIGNMENT 0 YS2-8b01.p1k chr04 353 829 803206 803205 F 477 0.00 1275 reject_low 15 ALIGNMENT 177 YS2-8b01.p1k chr07 53 349 735553 735850 F 297 88.55 1275 reject_low 1 ALIGNMENT 77 YS2-8b01.p1k chr03 352 57 168619 168919 C 296 78.38 1275 reject_low 24 ALIGNMENT 0 YS2-8b02.q1k chr03 141 62 233860 233859 C 80 0.00 1167 accept 0 ALIGNMENT 1025 YS2-8b02.p1k chr03 28 1227 232594 233808 F 1200 96.25 1274 accept 0 ALIGNMENT 0 YS2-8b02.q1k chr03 111 62 233830 233829 C 50 0.00 1167 reject_low 3 ALIGNMENT 0 YS2-8b02.q1k chr03 214 62 233847 233846 C 153 0.00 1167 reject_low 2 ALIGNMENT 36 YS2-8b02.q1k chr03 271 215 233790 233846 C 57 87.72 1167 reject_low 2 ALIGNMENT 0 YS2-8b02.p1k chr03 62 1154 233760 233759 F 1093 0.00 1274 reject_low 2 ALIGNMENT 184 YS2-8b02.q1k chr03 241 37 233730 233934 C 205 96.59 1167 reject_low 1 ALIGNMENT 27 YS2-8b02.p1k chr03 1155 1203 233760 233811 F 49 87.76 1274 reject_low 2 ALIGNMENT 788 YS2-8b02.q1k chr03 1091 142 232926 233859 C 950 95.89 1167 accept 0 ALIGNMENT 0 YS2-8b02.q1k chr03 841 272 233791 233790 C 570 0.00 1167 reject_low 2 ALIGNMENT 0 YS2-8b02.q1k chr03 841 242 233731 233730 C 600 0.00 1167 reject_low 1 ALIGNMENT 55 YS2-8b02.q1k chr03 211 112 233730 233829 C 100 85.00 1167 reject_low 3 ALIGNMENT 0 YS2-8b02.q1k chr03 841 212 233731 233730 C 630 0.00 1167 reject_low 3 ALIGNMENT 0 YS2-8b03.q1k vc_1 186 62 2512 2511 C 125 0.00 226 reject_low 1 ALIGNMENT 39 YS2-8b03.q1k vc_5 226 188 5025 5063 C 39 100.00 226 reject_low 4 ALIGNMENT 40 YS2-8b03.q1k vc_1 226 187 2472 2511 C 40 100.00 226 reject_low 1 ALIGNMENT 0 YS2-8b03.q1k vc_4 62 186 5832 5831 F 125 0.00 226 reject_low 3 ALIGNMENT 154 YS2-8b03.q1k chr08 186 30 437495 437651 C 157 100.00 226 accept 0 ALIGNMENT 40 YS2-8b03.q1k vc_3 226 187 2472 2511 C 40 100.00 226 reject_low 2 ALIGNMENT 40 YS2-8b03.q1k vc_4 187 226 5832 5871 F 40 100.00 226 reject_low 3 ALIGNMENT 0 YS2-8b03.q1k vc_7 62 188 13525 13524 F 127 0.00 226 reject_low 5 ALIGNMENT 0 YS2-8b03.q1k vc_5 187 62 37 36 C 126 0.00 226 reject_low 6 ALIGNMENT 36 YS2-8b03.q1k vc_5 223 188 1 36 C 36 100.00 226 reject_low 6 ALIGNMENT 0 YS2-8b03.q1k vc_3 186 62 2512 2511 C 125 0.00 226 reject_low 2 ALIGNMENT 0 YS2-8b03.q1k vc_5 187 62 5064 5063 C 126 0.00 226 reject_low 4 ALIGNMENT 38 YS2-8b03.q1k vc_7 189 226 13525 13562 F 38 100.00 226 reject_low 5 ALIGNMENT 0 YS2-8b03.q1k chr08 226 187 437496 437495 C 40 0.00 226 accept 0 ALIGNMENT 195 YS2-8b04.q1k chr13 543 268 512591 512866 C 276 90.58 1203 reject_bad_break 0 ALIGNMENT 58 YS2-8b04.q1k chr13 137 40 512863 512960 C 98 87.76 1203 reject_bad_break 0 ALIGNMENT 0 YS2-8b04.q1k chr13 267 138 512867 512862 C 130 0.00 1203 reject_bad_break 0 ALIGNMENT 995 YS2-8b05.q1k chr08 1208 41 469815 470992 C 1168 95.80 1210 accept 0 ALIGNMENT 1033 YS2-8b07.q1k chr01 1190 40 155382 156532 C 1151 97.05 1244 accept 0 ALIGNMENT 521 YS2-8b07.p1k chr01 26 679 150477 151149 F 654 94.95 1079 accept 0 ALIGNMENT 39 YS2-8b09.p1k chrm 342 290 53828 53882 C 53 92.45 644 reject_low 6,7 ALIGNMENT 0 YS2-8b09.q1k chrm 62 322 3060 3059 F 261 0.00 680 reject_low 9 ALIGNMENT 0 YS2-8b09.q1k chrm 559 387 50777 57006 C 173 0.00 680 reject_low 19 ALIGNMENT 0 YS2-8b09.p1k chrm 355 644 2804 2803 F 290 0.00 644 reject_low 23,24 ALIGNMENT 0 YS2-8b09.q1k chrm 618 680 48007 48006 F 63 0.00 680 reject_low 11 ALIGNMENT 38 YS2-8b09.q1k chrm 312 365 43967 44021 F 54 90.74 680 reject_low 7 ALIGNMENT 23 YS2-8b09.p1k chrm 99 127 2537 2565 F 29 93.10 644 reject_low 21 ALIGNMENT 0 YS2-8b09.q1k chrm 680 621 50717 50716 C 60 0.00 680 reject_low 19 ALIGNMENT 0 YS2-8b09.p1k chrm 644 147 53718 53717 C 498 0.00 644 reject_low 13 ALIGNMENT 24 YS2-8b09.q1k chrm 520 552 53717 53749 F 33 93.94 680 reject_low 26 ALIGNMENT 0 YS2-8b09.p1k chrm 107 62 53705 53704 C 46 0.00 644 reject_low 11,22 ALIGNMENT 42 YS2-8b09.p1k chrm 295 344 71207 71256 F 50 96.00 644 reject_low 25 ALIGNMENT 0 YS2-8b09.p1k chrm 644 343 53829 53828 C 302 0.00 644 reject_low 6,7 ALIGNMENT 0 YS2-8b09.p1k chrm 644 345 69054 69053 C 300 0.00 644 reject_low 20 ALIGNMENT 0 YS2-8b09.p1k chrm 184 644 80211 80210 F 461 0.00 644 reject_low 5 ALIGNMENT 24 YS2-8b09.p1k chrm 146 114 53717 53749 C 33 93.94 644 reject_low 13 ALIGNMENT 48 YS2-8b09.p1k chrm 348 289 80498 80557 C 60 93.33 644 reject_bad_break 0 ALIGNMENT 26 YS2-8b09.q1k chrm 561 618 44197 44249 F 58 87.93 680|0,11 reject_low 7,22 ALIGNMENT 0 YS2-8b09.q1k chrm 538 62 2566 2565 C 477 0.00 680 reject_low 14 ALIGNMENT 0 YS2-8b09.q1k chrm 680 568 2538 2537 C 113 0.00 680 reject_low 14 ALIGNMENT 0 YS2-8b09.q1k chrm 680 372 71208 71207 C 309 0.00 680 reject_low 10 ALIGNMENT 0 YS2-8b09.q1k chrm 553 596 53750 53735 F 44 0.00 680 reject_low 26 ALIGNMENT 38 YS2-8b09.q1k chrm 323 420 3060 3155 F 98 81.63 680 reject_low 9 ALIGNMENT 39 YS2-8b09.p1k chrm 344 297 11505 11552 C 48 95.83 644 reject_low 9 ALIGNMENT 0 YS2-8b09.q1k chrm 619 680 53757 53756 F 62 0.00 680 reject_low 6,7,26 ALIGNMENT 0 YS2-8b09.p1k chrm 301 147 48144 53665 C 155 0.00 644 reject_low 22 ALIGNMENT 49 YS2-8b09.p1k chrm 277 344 12244 12311 F 68 91.18 644 reject_low 27 ALIGNMENT 41 YS2-8b09.q1k chrm 386 323 57007 57071 C 64 89.06 680 reject_low 8,19 ALIGNMENT 0 YS2-8b09.q1k chrm 365 519 48144 53665 F 155 0.00 680 reject_low 6 ALIGNMENT 0 YS2-8b09.p1k chrm 644 106 44198 44197 C 539 0.00 644 reject_low 15 ALIGNMENT 0 YS2-8b09.q1k chrm 640 680 77959 77958 F 41 0.00 680 reject_bad_break 0 ALIGNMENT 0 YS2-8b09.p1k chrm 644 353 48094 48093 C 292 0.00 644 reject_low 22 ALIGNMENT 24 YS2-8b09.p1k chrm 332 278 11058 11114 C 55 83.64 644 reject_low 18 ALIGNMENT 38 YS2-8b09.q1k vc_7 643 680 13525 13562 F 38 100.00 680 reject_low 4 ALIGNMENT 0 YS2-8b09.q1k chrm 680 390 12245 12244 C 291 0.00 680 reject_low 23 ALIGNMENT 0 YS2-8b09.p1k chrm 107 644 68666 68665 F 538 0.00 644 reject_low 10 ALIGNMENT 0 YS2-8b09.p1k chrm 252 56 77769 77930 C 197 0.00 644 reject_low 2 ALIGNMENT 0 YS2-8b09.q1k chrm 377 680 53882 53881 F 304 0.00 680 reject_low 17 ALIGNMENT 0 YS2-8b09.p1k chrm 345 644 12311 12310 F 300 0.00 644 reject_low 27 ALIGNMENT 333 YS2-8b09.p1k chrm 589 99 77418 77938 C 491 93.48 644 reject_low 1 ALIGNMENT 0 YS2-8b09.q1k chrm 321 62 12312 12311 C 260 0.00 680 reject_low 23 ALIGNMENT 0 YS2-8b09.p1k chrm 644 147 53667 53666 C 498 0.00 644 reject_low 11 ALIGNMENT 0 YS2-8b09.p1k chrm 288 62 80558 80557 C 227 0.00 644 reject_bad_break 0 ALIGNMENT 0 YS2-8b09.p1k chrm 345 644 47517 47516 F 300 0.00 644 reject_low 19 ALIGNMENT 0 YS2-8b09.p1k chrm 644 333 11059 11058 C 312 0.00 644 reject_low 18 ALIGNMENT 0 YS2-8b09.p1k chrm 98 56 77939 77930 C 43 0.00 644 reject_low 1 ALIGNMENT 0 YS2-8b09.p1k chrm 644 627 77382 77381 C 18 0.00 644 reject_low 2 ALIGNMENT 0 YS2-8b09.q1k chrm 559 389 2607 2726 C 171 0.00 680 reject_low 21 ALIGNMENT 38 YS2-8b09.p1k chrm 352 302 48093 48143 C 51 92.16 644 reject_low 22 ALIGNMENT 0 YS2-8b09.p1k chrm 644 590 77419 77418 C 55 0.00 644 reject_low 1 ALIGNMENT 24 YS2-8b09.p1k chrm 56 106 2552 2606 F 51 86.27 644 reject_low 23,24,27 ALIGNMENT 0 YS2-8b09.p1k chrm 300 112 44022 47948 C 189 0.00 644 reject_low 28 ALIGNMENT 0 YS2-8b09.q1k chrm 680 611 2553 2552 C 70 0.00 680 reject_low 21 ALIGNMENT 0 YS2-8b09.q1k chrm 560 62 57324 57323 C 499 0.00 680 reject_low 16 ALIGNMENT 20 YS2-8b09.q1k chrm 597 618 53736 53757 F 22 100.00 680|11,0 reject_low 6,7,26 ALIGNMENT 21 YS2-8b09.p1k chrm 55 27 77931 77959 C 29 100.00 644 reject_low 1,2,20 ALIGNMENT 0 YS2-8b09.q1k chrm 322 62 57072 57071 C 261 0.00 680 reject_low 8,19 ALIGNMENT 0 YS2-8b09.q1k chrm 619 680 44249 44248 F 62 0.00 680 reject_low 22 ALIGNMENT 0 YS2-8b09.q1k vc_7 62 642 13525 13524 F 581 0.00 680 reject_low 4 ALIGNMENT 0 YS2-8b09.q1k chrm 680 387 57008 57007 C 294 0.00 680 reject_low 8 ALIGNMENT 0 YS2-8b09.p1k chrm 289 62 53883 53882 C 228 0.00 644 reject_low 6,7 ALIGNMENT 0 YS2-8b09.p1k chrm 128 644 2565 2564 F 517 0.00 644 reject_low 21 ALIGNMENT 0 YS2-8b09.q1k chrm 62 519 53717 53716 F 458 0.00 680 reject_low 26 ALIGNMENT 27 YS2-8b09.q1k chrm 610 560 2552 2606 C 51 88.24 680 reject_low 21 ALIGNMENT 34 YS2-8b09.p1k chrm 301 344 47474 47517 F 44 95.45 644 reject_low 19 ALIGNMENT 21 YS2-8b09.q1k chrm 617 561 57264 57323 C 57 82.46 680 reject_low 16 ALIGNMENT 0 YS2-8b09.q1k chrm 321 62 71257 71256 C 260 0.00 680 reject_low 10 ALIGNMENT 0 YS2-8b09.q1k chrm 608 607 44239 53746 F 0 0.00 680 reject_low 7 ALIGNMENT 39 YS2-8b09.q1k chrm 324 376 53828 53882 F 53 92.45 680 reject_low 17 ALIGNMENT 23 YS2-8b09.q1k chrm 567 539 2537 2565 C 29 93.10 680 reject_low 14 ALIGNMENT 329 YS2-8b09.q1k chrm 76 567 77418 77938 F 492 93.29 680 reject_bad_break 0 ALIGNMENT 0 YS2-8b09.p1k chrm 245 62 3156 3155 C 184 0.00 644 reject_low 12 ALIGNMENT 0 YS2-8b09.p1k chrm 296 62 11553 11552 C 235 0.00 644 reject_low 9 ALIGNMENT 0 YS2-8b09.p1k chrm 644 344 3061 3060 C 301 0.00 644 reject_low 12 ALIGNMENT 0 YS2-8b09.q1k chrm 62 311 43967 43966 F 250 0.00 680 reject_low 7 ALIGNMENT 35 YS2-8b09.p1k chrm 43 106 68599 68666 F 64 87.50 644 reject_low 10,25 ALIGNMENT 38 YS2-8b09.q1k vc_7 643 680 63 100 F 38 100.00 680 reject_low 3 ALIGNMENT 0 YS2-8b09.q1k chrm 568 610 77939 77930 F 43 0.00 680 reject_bad_break 0 ALIGNMENT 0 YS2-8b09.p1k chrm 62 300 47474 47473 F 239 0.00 644 reject_low 19 ALIGNMENT 44 YS2-8b09.q1k chrm 378 322 9476 9532 C 57 92.98 680 reject_low 24 ALIGNMENT 0 YS2-8b09.q1k chrm 559 596 53705 53735 F 38 0.00 680 reject_low 6 ALIGNMENT 23 YS2-8b09.p1k chrm 105 48 44197 44249 C 58 86.21 644 reject_low 15 ALIGNMENT 41 YS2-8b09.p1k chrm 140 183 80168 80211 F 44 97.73 644 reject_low 5 ALIGNMENT 56 YS2-8b09.p1k chrm 46 106 50716 50776 F 61 98.36 644 reject_low 8 ALIGNMENT 0 YS2-8b09.p1k chrm 280 56 69120 77930 C 225 0.00 644 reject_low 20 ALIGNMENT 0 YS2-8b09.q1k chrm 62 560 44197 44196 F 499 0.00 680 reject_low 22 ALIGNMENT 0 YS2-8b09.p1k chrm 107 277 2607 2726 F 171 0.00 644 reject_low 23,24 ALIGNMENT 49 YS2-8b09.q1k chrm 389 322 12244 12311 C 68 91.18 680 reject_low 23 ALIGNMENT 0 YS2-8b09.q1k chrm 321 62 9533 9532 C 260 0.00 680 reject_low 24 ALIGNMENT 0 YS2-8b09.q1k chrm 421 680 3155 3154 F 260 0.00 680 reject_low 9 ALIGNMENT 0 YS2-8b09.p1k chrm 644 345 11506 11505 C 300 0.00 644 reject_low 9 ALIGNMENT 0 YS2-8b09.p1k chrm 345 644 71256 71255 F 300 0.00 644 reject_low 25 ALIGNMENT 38 YS2-8b09.p1k chrm 354 301 43967 44021 C 54 90.74 644 reject_low 28 ALIGNMENT 20 YS2-8b09.q1k chrm 592 617 47982 48007 F 26 100.00 680 reject_low 11 ALIGNMENT 0 YS2-8b09.p1k chrm 107 294 68667 71206 F 188 0.00 644 reject_low 25 ALIGNMENT 0 YS2-8b09.q1k vc_7 62 642 63 62 F 581 0.00 680 reject_low 3 ALIGNMENT 0 YS2-8b09.q1k chrm 680 618 57265 57264 C 63 0.00 680 reject_low 16 ALIGNMENT 37 YS2-8b09.p1k chrm 344 281 69053 69119 C 64 87.50 644 reject_low 20 ALIGNMENT 0 YS2-8b09.p1k chrm 107 644 50776 50775 F 538 0.00 644 reject_low 8 ALIGNMENT 0 YS2-8b09.q1k chrm 311 62 2805 2804 C 250 0.00 680 reject_low 21 ALIGNMENT 38 YS2-8b09.q1k chrm 314 364 48093 48143 F 51 92.16 680 reject_low 6 ALIGNMENT 0 YS2-8b09.q1k chrm 62 313 48093 48092 F 252 0.00 680 reject_low 6 ALIGNMENT 42 YS2-8b09.q1k chrm 388 312 2727 2804 C 77 85.71 680 reject_low 21 ALIGNMENT 0 YS2-8b09.q1k chrm 62 323 53828 53827 F 262 0.00 680 reject_low 17 ALIGNMENT 0 YS2-8b09.q1k chrm 366 560 44022 44196 F 195 0.00 680 reject_low 7 ALIGNMENT 21 YS2-8b09.q1k chrm 611 639 77931 77959 F 29 100.00 680 reject_bad_break 0 ALIGNMENT 59 YS2-8b09.q1k chrm 620 560 50716 50776 C 61 100.00 680 reject_low 19 ALIGNMENT 0 YS2-8b09.p1k chrm 644 355 43968 43967 C 290 0.00 644 reject_low 28 ALIGNMENT 25 YS2-8b09.p1k chrm 111 49 47949 48007 C 63 85.71 644 reject_low 28 ALIGNMENT 0 YS2-8b09.p1k chrm 62 98 2537 2536 F 37 0.00 644 reject_low 21 ALIGNMENT 262 YS2-8b09.p1k chrm 626 253 77381 77768 C 374 95.99 644 reject_low 2 ALIGNMENT 42 YS2-8b09.p1k chrm 278 354 2727 2804 F 77 85.71 644 reject_low 23,24 ALIGNMENT 0 YS2-8b09.p1k chrm 107 276 2607 12243 F 170 0.00 644 reject_low 27 ALIGNMENT 42 YS2-8b09.q1k chrm 371 322 71207 71256 C 50 96.00 680 reject_low 10 ALIGNMENT 0 YS2-8b09.p1k chrm 62 139 80168 80167 F 78 0.00 644 reject_low 5 ALIGNMENT 0 YS2-8b09.q1k chrm 680 379 9477 9476 C 302 0.00 680 reject_low 24 ALIGNMENT 38 YS2-8b09.p1k chrm 343 246 3060 3155 C 98 81.63 644 reject_low 12 ALIGNMENT 0 YS2-8b09.p1k chrm 113 62 53750 53749 C 52 0.00 644 reject_low 13 ALIGNMENT 0 YS2-8b09.q1k chrm 62 591 47982 47981 F 530 0.00 680 reject_low 11 ALIGNMENT 24 YS2-8b09.q1k chrm 520 558 53666 53704 F 39 87.18 680 reject_low 6 ALIGNMENT 0 YS2-8b09.p1k chrm 277 62 11115 11114 C 216 0.00 644 reject_low 18 ALIGNMENT 24 YS2-8b09.p1k chrm 146 108 53666 53704 C 39 87.18 644 reject_low 11,22 ALIGNMENT 0 YS2-8b09.p1k chrm 644 349 80499 80498 C 296 0.00 644 reject_bad_break 0 ALIGNMENT 40 YS2-8b10.q1k vc_3 559 520 2472 2511 C 40 100.00 559 reject_low 5 ALIGNMENT 0 YS2-8b10.q1k vc_7 62 521 13525 13524 F 460 0.00 559 reject_low 7 ALIGNMENT 37 YS2-8b10.q1k vc_5 556 516 1 42 C 41 97.56 559 reject_low 8 ALIGNMENT 0 YS2-8b10.q1k chr15 559 521 200927 200926 C 39 0.00 559 accept_chi 1 ALIGNMENT 0 YS2-8b10.q1k vc_2 519 62 2145 2144 C 458 0.00 559 reject_low 4 ALIGNMENT 40 YS2-8b10.q1k vc_5 559 516 5025 5069 C 44 97.73 559 reject_low 2 ALIGNMENT 0 YS2-8b10.q1k vc_1 519 62 2512 2511 C 458 0.00 559 reject_low 3 ALIGNMENT 40 YS2-8b10.q1k vc_1 559 520 2472 2511 C 40 100.00 559 reject_low 3 ALIGNMENT 0 YS2-8b10.q1k vc_5 515 62 5070 5069 C 454 0.00 559 reject_low 2 ALIGNMENT 0 YS2-8b10.q1k vc_5 515 62 43 42 C 454 0.00 559 reject_low 8 ALIGNMENT 38 YS2-8b10.q1k vc_7 522 559 13525 13562 F 38 100.00 559 reject_low 7 ALIGNMENT 0 YS2-8b10.q1k vc_4 62 519 5832 5831 F 458 0.00 559 reject_low 6 ALIGNMENT 0 YS2-8b10.p1k chr15 516 534 201406 201405 F 19 0.00 534 accept_chi 0 ALIGNMENT 40 YS2-8b10.q1k vc_2 559 520 2105 2144 C 40 100.00 559 reject_low 4 ALIGNMENT 40 YS2-8b10.q1k vc_4 520 559 5832 5871 F 40 100.00 559 reject_low 6 ALIGNMENT 0 YS2-8b10.q1k vc_3 519 62 2512 2511 C 458 0.00 559 reject_low 5 ALIGNMENT 469 YS2-8b10.p1k chr15 37 515 200928 201406 F 479 100.00 534 accept_chi 0 ALIGNMENT 466 YS2-8b10.q1k chr15 520 41 200926 201406 C 480 99.79 559 accept_chi 1 ALIGNMENT 86 YS2-8b11.q1k vc_3 1051 1236 2531 2714 F 186 83.33 1267 reject_vc 2 ALIGNMENT 0 YS2-8b11.q1k vc_2 62 1050 2164 2163 F 989 0.00 1267 reject_vc 1 ALIGNMENT 0 YS2-8b11.q1k vc_4 62 1010 5831 5830 F 949 0.00 1267 reject_low 6 ALIGNMENT 0 YS2-8b11.q1k vc_7 62 1013 13525 13524 F 952 0.00 1267 reject_low 11 ALIGNMENT 86 YS2-8b11.q1k vc_1 1051 1236 2531 2714 F 186 83.33 1267 reject_vc 0 ALIGNMENT 0 YS2-8b11.q1k vc_4 1050 62 1535 1534 C 989 0.00 1267 reject_low 7 ALIGNMENT 32 YS2-8b11.q1k vc_3 1051 1011 2472 2512 C 41 95.12 1267 reject_low 10 ALIGNMENT 62 YS2-8b11.q1k vc_4 1141 1051 1446 1534 C 91 90.11 1267 reject_low 7 ALIGNMENT 32 YS2-8b11.q1k vc_1 1051 1011 2472 2512 C 41 95.12 1267 reject_low 8 ALIGNMENT 0 YS2-8b11.q1k vc_4 62 1050 126 125 F 989 0.00 1267 reject_vc 5 ALIGNMENT 83 YS2-8b11.q1k vc_4 1051 1211 126 284 F 161 85.09 1267 reject_vc 5 ALIGNMENT 32 YS2-8b11.q1k vc_2 1051 1011 2105 2145 C 41 95.12 1267 reject_low 9 ALIGNMENT 86 YS2-8b11.q1k vc_2 1051 1236 2164 2347 F 186 83.33 1267 reject_vc 1 ALIGNMENT 0 YS2-8b11.q1k vc_4 1052 1051 5872 6353 F 0 0.00 1267 reject_low 6 ALIGNMENT 29 YS2-8b11.q1k vc_7 1014 1051 13525 13562 F 38 94.74 1267 reject_low 11 ALIGNMENT 0 YS2-8b11.q1k vc_2 1010 62 2146 2145 C 949 0.00 1267 reject_low 9 ALIGNMENT 86 YS2-8b11.q1k vc_7 1236 1051 2544 2727 C 186 83.33 1267 reject_vc 4 ALIGNMENT 0 YS2-8b11.q1k vc_3 62 1050 2531 2530 F 989 0.00 1267 reject_vc 2 ALIGNMENT 0 YS2-8b11.q1k vc_3 1010 62 2513 2512 C 949 0.00 1267 reject_low 10 ALIGNMENT 0 YS2-8b11.q1k vc_1 62 1050 2531 2530 F 989 0.00 1267 reject_vc 0 ALIGNMENT 0 YS2-8b11.q1k vc_1 1010 62 2513 2512 C 949 0.00 1267 reject_low 8 ALIGNMENT 32 YS2-8b11.q1k vc_4 1011 1051 5831 5871 F 41 95.12 1267 reject_low 6 ALIGNMENT 0 YS2-8b11.q1k vc_4 1050 62 5813 5812 C 989 0.00 1267 reject_vc 3 ALIGNMENT 0 YS2-8b11.q1k vc_7 1050 62 2728 2727 C 989 0.00 1267 reject_vc 4 ALIGNMENT 83 YS2-8b11.q1k vc_4 1051 1211 6353 6511 F 161 85.09 1267|1,0 reject_low 6 ALIGNMENT 86 YS2-8b11.q1k vc_4 1236 1051 5629 5812 C 186 83.33 1267 reject_vc 3 ALIGNMENT 836 YS2-8b12.p1k chr02 1015 30 97534 98525 C 986 95.74 1116 accept 0 ALIGNMENT 959 YS2-8b12.q1k chr02 28 1145 94184 95305 F 1118 95.53 1243 accept 0 ALIGNMENT 976 YS2-8b13.q1k chr04 29 1152 1027157 1028283 F 1124 96.80 1222 accept 0 ALIGNMENT 926 YS2-8b13.p1k chr04 1109 45 1030689 1031762 C 1065 96.53 1241 accept 0 ALIGNMENT 919 YS2-8b14.q1k chr15 1165 40 966558 967701 C 1126 94.85 1223 accept 0 ALIGNMENT 960 YS2-8b16.q1k chr04 40 1170 887921 889050 F 1131 95.84 1234 accept 0 ALIGNMENT 917 YS2-8b16.p1k chr04 1104 28 888642 889712 C 1077 95.91 1373 accept 0 ALIGNMENT 1026 YS2-8b17.q1k chr14 38 1160 382172 383302 F 1123 98.22 1203 accept 0 ALIGNMENT 1032 YS2-8b17.p1k chr14 1258 26 386610 387845 C 1233 94.89 1279 accept 0 ALIGNMENT 931 YS2-8b19.p1k chr12 31 1088 312291 313364 F 1058 97.16 1233 accept 0 ALIGNMENT 1046 YS2-8b19.q1k chr12 1203 39 312693 313856 C 1165 97.51 1214 accept 0 ALIGNMENT 945 YS2-8b20.p1k chr07 1255 33 1069671 1070889 C 1223 93.21 1270 accept 0 ALIGNMENT 958 YS2-8b20.q1k chr07 39 1192 1065073 1066233 F 1154 95.32 1193 accept 0 ALIGNMENT 137 YS2-8b21.q1k chr14 174 31 491847 491991 C 144 99.31 215 accept_chi 1 ALIGNMENT 0 YS2-8b21.q1k vc_3 174 62 2513 2512 C 113 0.00 215 reject_low 4 ALIGNMENT 0 YS2-8b21.p1k chr14 207 225 491991 491990 F 19 0.00 225 accept_chi 0 ALIGNMENT 138 YS2-8b21.p1k chr14 61 206 491847 491991 F 146 99.32 225 accept_chi 0 ALIGNMENT 41 YS2-8b21.q1k vc_2 215 175 2105 2145 C 41 100.00 215 reject_low 3 ALIGNMENT 39 YS2-8b21.q1k vc_5 215 177 5025 5063 C 39 100.00 215 reject_low 6 ALIGNMENT 41 YS2-8b21.q1k vc_1 215 175 2472 2512 C 41 100.00 215 reject_low 2 ALIGNMENT 0 YS2-8b21.q1k vc_4 62 174 5831 5830 F 113 0.00 215 reject_low 5 ALIGNMENT 0 YS2-8b21.q1k vc_5 176 62 5064 5063 C 115 0.00 215 reject_low 6 ALIGNMENT 0 YS2-8b21.q1k vc_7 62 177 13525 13524 F 116 0.00 215 reject_low 7 ALIGNMENT 38 YS2-8b21.q1k vc_7 178 215 13525 13562 F 38 100.00 215 reject_low 7 ALIGNMENT 0 YS2-8b21.q1k vc_1 174 62 2513 2512 C 113 0.00 215 reject_low 2 ALIGNMENT 41 YS2-8b21.q1k vc_3 215 175 2472 2512 C 41 100.00 215 reject_low 4 ALIGNMENT 36 YS2-8b21.q1k vc_5 212 177 1 36 C 36 100.00 215 reject_low 8 ALIGNMENT 0 YS2-8b21.q1k chr14 215 175 491848 491847 C 41 0.00 215 accept_chi 1 ALIGNMENT 0 YS2-8b21.q1k vc_5 176 62 37 36 C 115 0.00 215 reject_low 8 ALIGNMENT 41 YS2-8b21.q1k vc_4 175 215 5831 5871 F 41 100.00 215 reject_low 5 ALIGNMENT 0 YS2-8b21.q1k vc_2 174 62 2146 2145 C 113 0.00 215 reject_low 3 ALIGNMENT 1019 YS2-8b22.q1k chr03 28 1105 252615 253697 F 1078 98.33 1112 accept 0 ALIGNMENT 881 YS2-8b22.p1k chr03 1099 30 256295 257365 C 1070 95.79 1121 accept 0 ALIGNMENT 938 YS2-8b23.p1k chr13 31 1155 801852 802982 F 1125 94.93 1161 accept 0 ALIGNMENT 891 YS2-8b23.q1k chr13 1112 42 804341 805417 C 1071 96.64 1114 accept 0 ALIGNMENT 61 YS2-8b24.p1k chr05 373 205 360709 360877 C 169 79.29 1161 reject_low 1 ALIGNMENT 23 YS2-8b24.p1k chr05 547 516 360535 360566 C 32 90.62 1161 reject_low 1 ALIGNMENT 27 YS2-8b24.p1k chr05 101 42 360981 361040 C 60 83.33 1161 reject_low 1 ALIGNMENT 0 YS2-8b24.p1k chr05 204 102 360878 360980 C 103 0.00 1161 reject_low 1 ALIGNMENT 0 YS2-8b24.p1k chr05 515 374 360567 360708 C 142 0.00 1161 reject_low 1 ALIGNMENT 1003 YS2-8b24.p1k chr02 39 1161 91483 92612 F 1123 97.68 1161 accept 0 ALIGNMENT 0 YS2-8b24.p1k chr05 852 548 360536 360535 C 305 0.00 1161 reject_low 1 ALIGNMENT 919 YS2-8b24.q1k chr02 1073 40 95492 96518 C 1034 97.97 1130 accept 0 ALIGNMENT 0 YS2-8c01.q1k vc_5 330 62 37 36 C 269 0.00 369 reject_low 7 ALIGNMENT 294 YS2-8c01.q1k chr12 328 28 647040 647340 C 301 99.34 369 accept_chi 0 ALIGNMENT 0 YS2-8c01.q1k vc_7 62 331 13525 13524 F 270 0.00 369 reject_low 6 ALIGNMENT 41 YS2-8c01.q1k vc_4 329 369 5831 5871 F 41 100.00 369 reject_low 4 ALIGNMENT 39 YS2-8c01.q1k vc_5 369 331 5025 5063 C 39 100.00 369 reject_low 5 ALIGNMENT 0 YS2-8c01.q1k vc_1 328 62 2513 2512 C 267 0.00 369 reject_low 2 ALIGNMENT 0 YS2-8c01.p1k chr12 363 380 647340 647339 F 18 0.00 380 accept_chi 1 ALIGNMENT 38 YS2-8c01.q1k vc_7 332 369 13525 13562 F 38 100.00 369 reject_low 6 ALIGNMENT 291 YS2-8c01.p1k chr12 62 362 647040 647340 F 301 99.00 380 accept_chi 1 ALIGNMENT 0 YS2-8c01.q1k vc_4 62 328 5831 5830 F 267 0.00 369 reject_low 4 ALIGNMENT 41 YS2-8c01.q1k vc_3 369 329 2472 2512 C 41 100.00 369 reject_low 3 ALIGNMENT 36 YS2-8c01.q1k vc_5 366 331 1 36 C 36 100.00 369 reject_low 7 ALIGNMENT 0 YS2-8c01.q1k vc_5 330 62 5064 5063 C 269 0.00 369 reject_low 5 ALIGNMENT 0 YS2-8c01.q1k chr12 369 329 647041 647040 C 41 0.00 369 accept_chi 0 ALIGNMENT 41 YS2-8c01.q1k vc_1 369 329 2472 2512 C 41 100.00 369 reject_low 2 ALIGNMENT 0 YS2-8c01.q1k vc_3 328 62 2513 2512 C 267 0.00 369 reject_low 3 ALIGNMENT 0 YS2-8c03.p1k chr12 326 343 455322 455321 F 18 0.00 343 accept 0 ALIGNMENT 277 YS2-8c03.p1k chr12 35 325 464167 464459 F 291 98.97 343 accept 1 ALIGNMENT 277 YS2-8c03.p1k chr12 35 325 455030 455322 F 291 98.97 343 accept 0 ALIGNMENT 0 YS2-8c03.p1k chr12 326 343 464459 464458 F 18 0.00 343 accept 1 ALIGNMENT 143 YS2-8c04.q1k chr12 644 302 848067 848408 C 343 80.47 1115 accept 0 ALIGNMENT 0 YS2-8c05.p1k chr04 62 311 169823 169822 F 250 0.00 1285 accept 0 ALIGNMENT 0 YS2-8c05.p1k chr04 350 924 169860 169859 F 575 0.00 1285 accept 0 ALIGNMENT 23 YS2-8c05.p1k chr04 312 349 169823 169860 F 38 97.37 1285 accept 0 ALIGNMENT 324 YS2-8c06.q1k chr07 865 232 1068353 1068986 C 634 84.23 1197 reject_low 2 ALIGNMENT 0 YS2-8c06.q1k chr15 231 62 24283 24282 C 170 0.00 1197 reject_low 3 ALIGNMENT 0 YS2-8c06.q1k chr09 231 62 18543 18542 C 170 0.00 1197 reject_low 4 ALIGNMENT 309 YS2-8c06.q1k chr10 865 232 17892 18525 C 634 83.44 1197 reject_low 5 ALIGNMENT 946 YS2-8c06.q1k chr07 30 1183 1076411 1077573 F 1154 94.71 1197 ambiguous_tel 1 ALIGNMENT 309 YS2-8c06.q1k chr09 865 232 17909 18542 C 634 83.44 1197 reject_low 4 ALIGNMENT 0 YS2-8c06.q1k chr07 231 62 1068987 1068986 C 170 0.00 1197 reject_low 2 ALIGNMENT 967 YS2-8c06.q1k chr02 30 1183 805151 806313 F 1154 95.32 1197 ambiguous_tel 0 ALIGNMENT 0 YS2-8c06.q1k chr10 231 62 18526 18525 C 170 0.00 1197 reject_low 5 ALIGNMENT 315 YS2-8c06.q1k chr15 865 232 23649 24282 C 634 83.75 1197 reject_low 3 ALIGNMENT 0 YS2-8c07.q1k vc_4 62 182 5827 5826 F 121 0.00 227 reject_low 4 ALIGNMENT 42 YS2-8c07.q1k vc_3 227 183 2472 2516 C 45 97.78 227 reject_low 3 ALIGNMENT 0 YS2-8c07.q1k vc_7 62 189 13525 13524 F 128 0.00 227 reject_low 6 ALIGNMENT 146 YS2-8c07.q1k chr09 187 39 193380 193528 C 149 100.00 227 accept_chi 0 ALIGNMENT 0 YS2-8c07.q1k vc_5 188 62 37 36 C 127 0.00 227 reject_low 7 ALIGNMENT 138 YS2-8c07.p1k chr09 38 184 193382 193528 F 147 98.64 203 accept_chi 1 ALIGNMENT 42 YS2-8c07.q1k vc_4 183 227 5827 5871 F 45 97.78 227 reject_low 4 ALIGNMENT 39 YS2-8c07.q1k vc_5 227 189 5025 5063 C 39 100.00 227 reject_low 5 ALIGNMENT 0 YS2-8c07.q1k vc_1 182 62 2517 2516 C 121 0.00 227 reject_low 2 ALIGNMENT 0 YS2-8c07.q1k chr09 227 188 193381 193380 C 40 0.00 227 accept_chi 0 ALIGNMENT 0 YS2-8c07.p1k chr09 185 203 193528 193527 F 19 0.00 203 accept_chi 1 ALIGNMENT 42 YS2-8c07.q1k vc_1 227 183 2472 2516 C 45 97.78 227 reject_low 2 ALIGNMENT 38 YS2-8c07.q1k vc_7 190 227 13525 13562 F 38 100.00 227 reject_low 6 ALIGNMENT 0 YS2-8c07.q1k vc_5 188 62 5064 5063 C 127 0.00 227 reject_low 5 ALIGNMENT 0 YS2-8c07.q1k vc_3 182 62 2517 2516 C 121 0.00 227 reject_low 3 ALIGNMENT 36 YS2-8c07.q1k vc_5 224 189 1 36 C 36 100.00 227 reject_low 7 ALIGNMENT 969 YS2-8c08.q1k chr07 1166 33 580717 581849 C 1134 95.59 1254 accept 0 ALIGNMENT 0 YS2-8c09.q1k chr14 918 62 96610 96609 C 857 0.00 1269 reject_low 18 ALIGNMENT 0 YS2-8c09.q1k chr09 62 706 196650 196649 F 645 0.00 1269 reject_low 4 ALIGNMENT 0 YS2-8c09.q1k chr02 62 698 643475 643474 F 637 0.00 1269 reject_low 2 ALIGNMENT 297 YS2-8c09.q1k chr14 1074 704 561611 561981 C 371 94.61 1269 reject_low 9 ALIGNMENT 308 YS2-8c09.q1k chr02 705 1074 35846 36215 F 370 95.68 1269 reject_low 3 ALIGNMENT 0 YS2-8c09.q1k chr14 62 704 632119 632118 F 643 0.00 1269 reject_low 14 ALIGNMENT 63 YS2-8c09.q1k chr15 791 702 710025 710113 C 90 94.44 1269|2,0 reject_low 19 ALIGNMENT 627 YS2-8c09.q1k chr04 30 706 436360 437037 F 677 98.97 1269 reject_bad_break 0 ALIGNMENT 0 YS2-8c09.q1k chr08 706 62 91758 91757 C 645 0.00 1269 reject_low 11 ALIGNMENT 296 YS2-8c09.q1k chr02 699 1074 643475 643850 F 376 93.88 1269 reject_low 2 ALIGNMENT 306 YS2-8c09.q1k chr13 1074 707 503773 504140 C 368 95.65 1269 reject_low 7 ALIGNMENT 0 YS2-8c09.q1k chr16 62 706 442739 442738 F 645 0.00 1269 reject_low 13 ALIGNMENT 0 YS2-8c09.q1k chr07 62 706 931174 931173 F 645 0.00 1269 reject_low 17 ALIGNMENT 0 YS2-8c09.q1k chr13 706 62 504141 504140 C 645 0.00 1269 reject_low 7 ALIGNMENT 263 YS2-8c09.q1k chr04 1074 707 437149 437515 C 368 91.85 1269 reject_low 16 ALIGNMENT 294 YS2-8c09.q1k chr07 1074 707 110862 111229 C 368 94.84 1269 reject_low 10 ALIGNMENT 287 YS2-8c09.q1k chr14 705 1074 632119 632488 F 370 93.78 1269 reject_low 14 ALIGNMENT 34 YS2-8c09.q1k chr04 1078 1173 437035 437139 F 96 81.25 1269 reject_bad_break 0 ALIGNMENT 294 YS2-8c09.q1k chr08 1074 707 91390 91757 C 368 94.57 1269 reject_low 11 ALIGNMENT 0 YS2-8c09.q1k chr15 789 790 704061 710026 C 0 0.00 1269 reject_low 19 ALIGNMENT 294 YS2-8c09.q1k chr16 707 1074 442739 443106 F 368 94.57 1269 reject_low 13 ALIGNMENT 0 YS2-8c09.q1k chr13 62 706 808536 808535 F 645 0.00 1269 reject_low 15 ALIGNMENT 0 YS2-8c09.q1k chr04 707 1077 437038 437034 F 371 0.00 1269 reject_bad_break 0 ALIGNMENT 0 YS2-8c09.q1k chr10 706 62 197835 197834 C 645 0.00 1269 reject_low 5 ALIGNMENT 0 YS2-8c09.q1k chr10 706 62 203690 203689 C 645 0.00 1269 reject_low 6 ALIGNMENT 107 YS2-8c09.q1k chr14 1074 919 96454 96609 C 156 91.03 1269 reject_low 18 ALIGNMENT 259 YS2-8c09.q1k chr07 707 1074 931174 931540 F 368 91.30 1269 reject_low 17 ALIGNMENT 0 YS2-8c09.q1k chr16 62 706 436887 436886 F 645 0.00 1269 reject_low 12 ALIGNMENT 0 YS2-8c09.q1k chr05 62 704 354354 354353 F 643 0.00 1269 reject_low 1 ALIGNMENT 0 YS2-8c09.q1k chr14 703 62 561982 561981 C 642 0.00 1269 reject_low 9 ALIGNMENT 306 YS2-8c09.q1k chr09 707 1074 196650 197017 F 368 95.65 1269 reject_low 4 ALIGNMENT 300 YS2-8c09.q1k chr08 1074 707 85538 85905 C 368 95.11 1269 reject_low 8 ALIGNMENT 294 YS2-8c09.q1k chr16 707 1074 436887 437254 F 368 94.57 1269 reject_low 12 ALIGNMENT 306 YS2-8c09.q1k chr10 1074 707 197467 197834 C 368 95.65 1269 reject_low 5 ALIGNMENT 306 YS2-8c09.q1k chr10 1074 707 203322 203689 C 368 95.65 1269 reject_low 6 ALIGNMENT 278 YS2-8c09.q1k chr13 707 1074 808536 808902 F 368 93.21 1269 reject_low 15 ALIGNMENT 0 YS2-8c09.q1k chr04 706 62 437516 437515 C 645 0.00 1269 reject_low 16 ALIGNMENT 0 YS2-8c09.q1k chr07 706 62 111230 111229 C 645 0.00 1269 reject_low 10 ALIGNMENT 0 YS2-8c09.q1k chr02 62 704 35846 35845 F 643 0.00 1269 reject_low 3 ALIGNMENT 285 YS2-8c09.q1k chr05 705 1079 354354 354729 F 375 93.33 1269 reject_low 1 ALIGNMENT 0 YS2-8c09.q1k chr15 701 62 710114 710113 C 640 0.00 1269 reject_low 19 ALIGNMENT 217 YS2-8c09.q1k chr15 1074 787 703776 704063 C 288 92.71 1269|0,3 reject_low 19 ALIGNMENT 0 YS2-8c09.q1k chr08 706 62 85906 85905 C 645 0.00 1269 reject_low 8 ALIGNMENT 0 YS2-8c12.q1k vc_5 947 62 37 36 C 886 0.00 1260 reject_low 25 ALIGNMENT 0 YS2-8c12.q1k vc_1 62 985 2531 2530 F 924 0.00 1260 reject_low 9 ALIGNMENT 39 YS2-8c12.q1k vc_5 986 948 5025 5063 C 39 100.00 1260 reject_low 23 ALIGNMENT 20 YS2-8c12.p1k vc_7 955 933 2727 2749 C 23 95.65 1310 reject_low 16 ALIGNMENT 0 YS2-8c12.q1k vc_2 62 985 2164 2163 F 924 0.00 1260 reject_low 10 ALIGNMENT 41 YS2-8c12.q1k vc_3 986 946 2472 2512 C 41 100.00 1260 reject_low 22 ALIGNMENT 0 YS2-8c12.q1k vc_5 62 985 2398 2397 F 924 0.00 1260 reject_vc 0 ALIGNMENT 0 YS2-8c12.p1k vc_2 954 62 2106 2105 C 893 0.00 1310 reject_low 3 ALIGNMENT 176 YS2-8c12.p1k vc_7 955 1234 13562 13852 F 280 88.21 1310 reject_low 6 ALIGNMENT 0 YS2-8c12.q1k vc_7 985 62 2728 2727 C 924 0.00 1260 reject_vc 1 ALIGNMENT 176 YS2-8c12.p1k vc_2 1234 955 1815 2105 C 280 88.21 1310 reject_low 3 ALIGNMENT 101 YS2-8c12.q1k vc_4 986 1149 6353 6514 F 164 89.63 1260|1,0 reject_low 12 ALIGNMENT 176 YS2-8c12.p1k vc_3 1234 955 1815 2105 C 280 88.21 1310 reject_low 4 ALIGNMENT 123 YS2-8c12.q1k vc_2 986 1258 2164 2436 F 273 83.88 1260 reject_low 10 ALIGNMENT 0 YS2-8c12.p1k vc_7 932 62 2750 2749 C 871 0.00 1310 reject_low 16 ALIGNMENT 0 YS2-8c12.p1k vc_7 62 954 13562 13561 F 893 0.00 1310 reject_low 6 ALIGNMENT 0 YS2-8c12.p1k vc_1 954 62 2473 2472 C 893 0.00 1310 reject_low 18 ALIGNMENT 0 YS2-8c12.p1k vc_3 954 62 2473 2472 C 893 0.00 1310 reject_low 19 ALIGNMENT 123 YS2-8c12.q1k vc_7 1258 986 2455 2727 C 273 83.88 1260 reject_vc 1 ALIGNMENT 36 YS2-8c12.q1k vc_5 983 948 1 36 C 36 100.00 1260 reject_low 25 ALIGNMENT 0 YS2-8c12.q1k vc_4 62 985 126 125 F 924 0.00 1260 reject_low 7 ALIGNMENT 0 YS2-8c12.q1k vc_3 945 62 2513 2512 C 884 0.00 1260 reject_low 22 ALIGNMENT 0 YS2-8c12.q1k vc_2 945 62 2146 2145 C 884 0.00 1260 reject_low 21 ALIGNMENT 20 YS2-8c12.p1k vc_2 933 955 2142 2164 F 23 95.65 1310 reject_low 14 ALIGNMENT 62 YS2-8c12.q1k vc_4 1073 986 1450 1534 C 88 93.18 1260 reject_low 17 ALIGNMENT 176 YS2-8c12.p1k vc_7 955 1234 100 390 F 280 88.21 1310 reject_vc 1 ALIGNMENT 20 YS2-8c12.p1k vc_1 933 955 2509 2531 F 23 95.65 1310 reject_low 13 ALIGNMENT 123 YS2-8c12.q1k vc_3 986 1258 2531 2803 F 273 83.88 1260 reject_low 11 ALIGNMENT 0 YS2-8c12.p1k vc_1 954 62 2106 2105 C 893 0.00 1310 reject_low 2 ALIGNMENT 0 YS2-8c12.q1k vc_1 945 62 2513 2512 C 884 0.00 1260 reject_low 20 ALIGNMENT 26 YS2-8c12.p1k vc_1 985 955 2441 2472 C 31 96.77 1310 reject_low 18 ALIGNMENT 26 YS2-8c12.p1k vc_3 985 955 2441 2472 C 31 96.77 1310 reject_low 19 ALIGNMENT 0 YS2-8c12.q1k vc_4 987 986 5872 6353 F 0 0.00 1260 reject_low 12 ALIGNMENT 20 YS2-8c12.p1k vc_3 933 955 2509 2531 F 23 95.65 1310 reject_low 15 ALIGNMENT 123 YS2-8c12.q1k vc_1 986 1258 2531 2803 F 273 83.88 1260 reject_low 9 ALIGNMENT 176 YS2-8c12.p1k vc_5 1234 955 4735 5025 C 280 88.21 1310 reject_vc 0 ALIGNMENT 176 YS2-8c12.p1k vc_4 955 1234 5871 6161 F 280 88.21 1310 reject_low 5 ALIGNMENT 41 YS2-8c12.q1k vc_4 946 986 5831 5871 F 41 100.00 1260 reject_low 12 ALIGNMENT 41 YS2-8c12.q1k vc_1 986 946 2472 2512 C 41 100.00 1260 reject_low 20 ALIGNMENT 38 YS2-8c12.q1k vc_7 949 986 13525 13562 F 38 100.00 1260 reject_low 24 ALIGNMENT 0 YS2-8c12.p1k vc_3 954 62 2106 2105 C 893 0.00 1310 reject_low 4 ALIGNMENT 20 YS2-8c12.p1k vc_4 955 933 5812 5834 C 23 95.65 1310 reject_low 7 ALIGNMENT 0 YS2-8c12.q1k vc_4 985 62 1535 1534 C 924 0.00 1260 reject_low 17 ALIGNMENT 123 YS2-8c12.q1k vc_5 986 1258 2398 2670 F 273 83.88 1260 reject_vc 0 ALIGNMENT 0 YS2-8c12.p1k vc_5 954 62 5026 5025 C 893 0.00 1310 reject_vc 0 ALIGNMENT 0 YS2-8c12.q1k vc_4 62 945 5831 5830 F 884 0.00 1260 reject_low 12 ALIGNMENT 176 YS2-8c12.p1k vc_1 1234 955 1815 2105 C 280 88.21 1310 reject_low 2 ALIGNMENT 0 YS2-8c12.q1k vc_3 62 985 2531 2530 F 924 0.00 1260 reject_low 11 ALIGNMENT 101 YS2-8c12.q1k vc_4 986 1149 126 287 F 164 89.63 1260 reject_low 7 ALIGNMENT 41 YS2-8c12.q1k vc_2 986 946 2105 2145 C 41 100.00 1260 reject_low 21 ALIGNMENT 0 YS2-8c12.p1k vc_7 62 954 100 99 F 893 0.00 1310 reject_vc 1 ALIGNMENT 0 YS2-8c12.p1k vc_3 62 932 2509 2508 F 871 0.00 1310 reject_low 15 ALIGNMENT 0 YS2-8c12.p1k vc_4 932 62 5835 5834 C 871 0.00 1310 reject_low 7 ALIGNMENT 0 YS2-8c12.q1k vc_4 985 62 5813 5812 C 924 0.00 1260 reject_low 8 ALIGNMENT 0 YS2-8c12.p1k vc_2 62 932 2142 2141 F 871 0.00 1310 reject_low 14 ALIGNMENT 0 YS2-8c12.q1k vc_7 62 948 13525 13524 F 887 0.00 1260 reject_low 24 ALIGNMENT 0 YS2-8c12.p1k vc_1 62 932 2509 2508 F 871 0.00 1310 reject_low 13 ALIGNMENT 124 YS2-8c12.q1k vc_4 1258 986 5538 5812 C 273 84.62 1260 reject_low 8 ALIGNMENT 0 YS2-8c12.p1k vc_4 62 954 5871 5870 F 893 0.00 1310 reject_low 5 ALIGNMENT 0 YS2-8c12.q1k vc_5 947 62 5064 5063 C 886 0.00 1260 reject_low 23 ALIGNMENT 292 YS2-8c14.p1k chr16 424 24 437778 438192 C 401 93.02 971 ambiguous_trans 3 ALIGNMENT 976 YS2-8c14.q1k chr12 39 1202 781526 782694 F 1164 95.19 1239 accept 0 ALIGNMENT 292 YS2-8c14.p1k chr08 24 424 90452 90866 F 401 93.02 971 ambiguous_trans 1 ALIGNMENT 292 YS2-8c14.p1k chr10 24 424 202384 202798 F 401 93.02 971 ambiguous_trans 2 ALIGNMENT 916 YS2-8c15.p1k chr09 1131 58 13891 14967 C 1074 95.44 1273 ambiguous_tel 1 ALIGNMENT 916 YS2-8c15.p1k chr10 1131 58 13874 14950 C 1074 95.44 1273 ambiguous_tel 2 ALIGNMENT 492 YS2-8c15.p1k chr02 58 1131 188039 189115 F 1074 82.22 1273 reject_low 4 ALIGNMENT 949 YS2-8c15.q1k chr01 1199 30 142089 143274 C 1170 94.53 1214 accept_chi 0 ALIGNMENT 805 YS2-8c15.p1k chr14 58 1131 751524 752600 F 1074 91.99 1273 accept_chi 3 ALIGNMENT 0 YS2-8c17.p1k chr14 103 186 688140 688139 F 84 0.00 1270 reject_low 1 ALIGNMENT 762 YS2-8c17.q1k chr14 315 1250 684546 685489 F 936 94.66 1284 accept 0 ALIGNMENT 860 YS2-8c17.p1k chr14 1137 38 687212 688311 C 1100 93.36 1270 accept 0 ALIGNMENT 23 YS2-8c17.p1k chr14 187 209 688140 688162 F 23 100.00 1270 reject_low 1 ALIGNMENT 0 YS2-8c17.p1k chr14 210 792 688162 688161 F 583 0.00 1270 reject_low 1 ALIGNMENT 1027 YS2-8c21.p1k chr10 1210 30 66140 67321 C 1181 96.27 1210 accept 0 ALIGNMENT 995 YS2-8c21.q1k chr10 38 1126 60691 61783 F 1089 97.98 1128 accept 0 ALIGNMENT 958 YS2-8c24.q1k chr09 1117 40 179417 180489 C 1078 97.96 1123 accept_chi 0 ALIGNMENT 730 YS2-8c24.p1k chr07 36 1102 759762 760829 F 1067 90.35 1158 accept_chi 1 ALIGNMENT 30 YS2-8d01.p1k chr07 333 29 735492 735801 C 305 73.77 1360 reject_low 12 ALIGNMENT 0 YS2-8d01.p1k chr13 452 62 808317 808316 C 391 0.00 1360 reject_low 11 ALIGNMENT 0 YS2-8d01.p1k chr12 117 91 656570 656606 C 27 0.00 1360 reject_low 20 ALIGNMENT 27 YS2-8d01.p1k chr03 118 207 168771 168862 F 90 80.00 1360 reject_low 18 ALIGNMENT 0 YS2-8d01.p1k chr12 909 531 448646 448645 C 379 0.00 1360 reject_low 2 ALIGNMENT 52 YS2-8d01.p1k chr06 280 102 261283 261455 C 179 80.45 1360 reject_low 8 ALIGNMENT 0 YS2-8d01.p1k chr04 452 62 645220 645219 C 391 0.00 1360 reject_low 5 ALIGNMENT 27 YS2-8d01.p1k chr03 29 90 168672 168733 F 62 82.26 1360 reject_low 18 ALIGNMENT 0 YS2-8d01.p1k chr04 528 909 521042 521041 F 382 0.00 1360 reject_low 7 ALIGNMENT 73 YS2-8d01.p1k chr04 530 453 802720 802797 C 78 98.72 1360 reject_low 6 ALIGNMENT 0 YS2-8d01.p1k chr06 909 281 261284 261283 C 629 0.00 1360 reject_low 8 ALIGNMENT 0 YS2-8d01.p1k chr05 909 531 131077 131076 C 379 0.00 1360 reject_low 10 ALIGNMENT 27 YS2-8d01.p1k chr09 90 29 246412 246473 C 62 82.26 1360 reject_low 19 ALIGNMENT 27 YS2-8d01.p1k chr12 207 118 656478 656569 C 90 80.00 1360 reject_low 20 ALIGNMENT 0 YS2-8d01.p1k chr13 909 526 808245 808244 C 384 0.00 1360 reject_low 11 ALIGNMENT 0 YS2-8d01.p1k chr13 909 208 504412 504411 C 702 0.00 1360 reject_low 14 ALIGNMENT 21 YS2-8d01.p1k chr12 29 91 365888 365952 F 63 80.95 1360 reject_low 16 ALIGNMENT 0 YS2-8d01.p1k chr16 909 294 62377 62376 C 616 0.00 1360 reject_low 17 ALIGNMENT 36 YS2-8d01.p1k chr04 159 29 1151145 1151283 C 131 79.39 1360 reject_low 15 ALIGNMENT 0 YS2-8d01.p1k chr04 62 452 520968 520967 F 391 0.00 1360 reject_low 7 ALIGNMENT 0 YS2-8d01.p1k chr16 117 91 62547 62583 C 27 0.00 1360 reject_low 17 ALIGNMENT 77 YS2-8d01.p1k chr05 451 529 250283 250361 F 79 100.00 1360 reject_low 4 ALIGNMENT 0 YS2-8d01.p1k chr08 532 909 134392 134391 F 378 0.00 1360 reject_low 3 ALIGNMENT 74 YS2-8d01.p1k chr04 453 527 520968 521042 F 75 100.00 1360 reject_low 7 ALIGNMENT 27 YS2-8d01.p1k chr12 90 29 656607 656668 C 62 82.26 1360 reject_low 20 ALIGNMENT 0 YS2-8d01.p1k chr08 62 445 134307 134306 F 384 0.00 1360 reject_low 3 ALIGNMENT 0 YS2-8d01.p1k chr03 437 438 168383 169067 C 0 0.00 1360 reject_bad_break 0 ALIGNMENT 0 YS2-8d01.p1k chr12 281 909 366145 366144 F 629 0.00 1360 reject_low 16 ALIGNMENT 109 YS2-8d01.p1k chr03 438 304 169067 169201 C 135 95.56 1360|1,3 reject_bad_break 0 ALIGNMENT 41 YS2-8d01.p1k chr03 98 29 169393 169462 C 70 87.14 1360 reject_low 13 ALIGNMENT 0 YS2-8d01.p1k chr03 91 117 168734 168770 F 27 0.00 1360 reject_low 18 ALIGNMENT 60 YS2-8d01.p1k chr13 525 453 808244 808316 C 73 94.52 1360 reject_low 11 ALIGNMENT 0 YS2-8d01.p1k chr05 457 62 131149 131148 C 396 0.00 1360 reject_low 10 ALIGNMENT 0 YS2-8d01.p1k chr03 208 909 168862 168861 F 702 0.00 1360 reject_low 18 ALIGNMENT 39 YS2-8d01.p1k chr13 207 29 504411 504598 C 179 76.54 1360 reject_low 14 ALIGNMENT 62 YS2-8d01.p1k chr05 530 458 131076 131148 C 73 95.89 1360 reject_low 10 ALIGNMENT 0 YS2-8d01.p1k chr12 441 62 448734 448733 C 380 0.00 1360 reject_low 2 ALIGNMENT 0 YS2-8d01.p1k chr05 530 909 250361 250360 F 380 0.00 1360 reject_low 4 ALIGNMENT 234 YS2-8d01.p1k chr03 308 29 169540 169814 C 280 96.79 1360|2,0 reject_bad_break 0 ALIGNMENT 75 YS2-8d01.p1k chr04 529 453 645143 645219 C 77 100.00 1360 reject_low 5 ALIGNMENT 0 YS2-8d01.p1k chr07 909 334 735493 735492 C 576 0.00 1360 reject_low 12 ALIGNMENT 79 YS2-8d01.p1k chr12 530 442 448645 448733 C 89 96.63 1360 reject_low 2 ALIGNMENT 0 YS2-8d01.p1k chr04 909 530 645144 645143 C 380 0.00 1360 reject_low 5 ALIGNMENT 0 YS2-8d01.p1k chr02 531 909 350902 350901 F 379 0.00 1360 reject_low 9 ALIGNMENT 0 YS2-8d01.p1k chr03 306 307 169199 169541 C 0 0.00 1360 reject_bad_break 0 ALIGNMENT 965 YS2-8d01.q1k chr03 40 1181 166491 167651 F 1142 96.76 1187 reject_bad_break 0 ALIGNMENT 0 YS2-8d01.p1k chr12 909 208 656479 656478 C 702 0.00 1360 reject_low 20 ALIGNMENT 0 YS2-8d01.p1k chr12 92 117 365953 365986 F 26 0.00 1360 reject_low 16 ALIGNMENT 0 YS2-8d01.p1k chr03 909 99 169394 169393 C 811 0.00 1360 reject_low 13 ALIGNMENT 0 YS2-8d01.p1k chr02 62 457 350830 350829 F 396 0.00 1360 reject_low 9 ALIGNMENT 78 YS2-8d01.p1k chr08 446 531 134307 134392 F 86 97.67 1360 reject_low 3 ALIGNMENT 0 YS2-8d01.p1k chr04 909 160 1151146 1151145 C 750 0.00 1360 reject_low 15 ALIGNMENT 0 YS2-8d01.p1k chr04 452 62 802798 802797 C 391 0.00 1360 reject_low 6 ALIGNMENT 32 YS2-8d01.p1k chr16 293 118 62376 62546 C 176 77.27 1360 reject_low 17 ALIGNMENT 0 YS2-8d01.p1k chr05 62 450 250283 250282 F 389 0.00 1360 reject_low 4 ALIGNMENT 0 YS2-8d01.p1k chr09 117 91 246375 246411 C 27 0.00 1360 reject_low 19 ALIGNMENT 65 YS2-8d01.p1k chr02 458 530 350830 350902 F 73 97.26 1360 reject_low 9 ALIGNMENT 0 YS2-8d01.p1k chr06 101 62 261456 261455 C 40 0.00 1360 reject_low 8 ALIGNMENT 0 YS2-8d01.p1k chr09 909 208 246284 246283 C 702 0.00 1360 reject_low 19 ALIGNMENT 0 YS2-8d01.p1k chr04 909 531 802721 802720 C 379 0.00 1360 reject_low 6 ALIGNMENT 27 YS2-8d01.p1k chr16 90 29 62584 62645 C 62 82.26 1360 reject_low 17 ALIGNMENT 66 YS2-8d01.p1k chr12 118 280 365987 366145 F 163 83.44 1360 reject_low 16 ALIGNMENT 27 YS2-8d01.p1k chr09 207 118 246283 246374 C 90 80.00 1360 reject_low 19 ALIGNMENT 78 YS2-8d01.p1k chr07 280 29 327907 328162 C 252 79.76 1360 reject_low 1 ALIGNMENT 620 YS2-8d01.p1k chr03 1243 436 167572 168384 C 808 92.95 1360|0,2 reject_bad_break 0 ALIGNMENT 0 YS2-8d01.p1k chr07 909 281 327908 327907 C 629 0.00 1360 reject_low 1 ALIGNMENT 1021 YS2-8d02.q1k chr08 44 1163 481495 482610 F 1120 97.68 1196 accept 0 ALIGNMENT 983 YS2-8d02.p1k chr08 1166 32 486696 487844 C 1135 96.56 1320 accept 0 ALIGNMENT 845 YS2-8d03.p1k chr16 1055 39 820499 821529 C 1017 95.58 1131 accept 0 ALIGNMENT 0 YS2-8d05.q1k vc_4 62 186 5832 5831 F 125 0.00 226 reject_low 4 ALIGNMENT 0 YS2-8d05.q1k chr08 226 187 437496 437495 C 40 0.00 226 accept_chi 1 ALIGNMENT 0 YS2-8d05.q1k vc_7 62 188 13525 13524 F 127 0.00 226 reject_low 6 ALIGNMENT 39 YS2-8d05.q1k vc_5 226 188 5025 5063 C 39 100.00 226 reject_low 5 ALIGNMENT 154 YS2-8d05.q1k chr08 186 30 437495 437651 C 157 100.00 226 accept_chi 1 ALIGNMENT 0 YS2-8d05.q1k vc_3 186 62 2512 2511 C 125 0.00 226 reject_low 3 ALIGNMENT 0 YS2-8d05.q1k vc_5 187 62 5064 5063 C 126 0.00 226 reject_low 5 ALIGNMENT 36 YS2-8d05.q1k vc_5 223 188 1 36 C 36 100.00 226 reject_low 7 ALIGNMENT 40 YS2-8d05.q1k vc_1 226 187 2472 2511 C 40 100.00 226 reject_low 2 ALIGNMENT 0 YS2-8d05.q1k vc_5 187 62 37 36 C 126 0.00 226 reject_low 7 ALIGNMENT 154 YS2-8d05.p1k chr08 28 184 437495 437651 F 157 100.00 203 accept_chi 0 ALIGNMENT 0 YS2-8d05.q1k vc_1 186 62 2512 2511 C 125 0.00 226 reject_low 2 ALIGNMENT 40 YS2-8d05.q1k vc_3 226 187 2472 2511 C 40 100.00 226 reject_low 3 ALIGNMENT 38 YS2-8d05.q1k vc_7 189 226 13525 13562 F 38 100.00 226 reject_low 6 ALIGNMENT 40 YS2-8d05.q1k vc_4 187 226 5832 5871 F 40 100.00 226 reject_low 4 ALIGNMENT 0 YS2-8d05.p1k chr08 185 203 437651 437650 F 19 0.00 203 accept_chi 0 ALIGNMENT 997 YS2-8d06.q1k chr03 1174 31 186642 187788 C 1144 96.68 1174 accept 0 ALIGNMENT 970 YS2-8d06.p1k chr03 25 1131 184424 185546 F 1107 96.12 1288 accept 0 ALIGNMENT 305 YS2-8d07.q1k chr07 839 40 549713 550513 C 800 80.38 1236 reject_low 3 ALIGNMENT 172 YS2-8d07.q1k chr07 850 1201 359626 359987 F 352 83.24 1236 reject_low 2 ALIGNMENT 779 YS2-8d07.q1k chr12 849 40 811375 812185 C 810 99.75 1236 accept_chi 1 ALIGNMENT 0 YS2-8d07.q1k chr07 62 849 359626 359625 F 788 0.00 1236 reject_low 2 ALIGNMENT 887 YS2-8d07.p1k chr08 23 1048 276544 277571 F 1026 96.10 1270 accept_chi 0 ALIGNMENT 903 YS2-8d08.q1k chr04 1064 30 101448 102491 C 1035 97.20 1225 accept 0 ALIGNMENT 1008 YS2-8d09.q1k chr11 1146 31 499311 500431 C 1116 98.21 1277 accept 0 ALIGNMENT 976 YS2-8d09.p1k chr11 30 1165 495911 497048 F 1136 96.30 1306 accept 0 ALIGNMENT 924 YS2-8d11.q1k chr09 1134 30 100041 101133 C 1105 96.02 1330 accept 0 ALIGNMENT 0 YS2-8d12.q1k vc_4 62 246 5831 5830 F 185 0.00 287 reject_low 5 ALIGNMENT 0 YS2-8d12.q1k chr15 248 287 668695 668694 F 40 0.00 287 accept_chi 0 ALIGNMENT 0 YS2-8d12.q1k vc_5 248 62 5064 5063 C 187 0.00 287 reject_low 6 ALIGNMENT 0 YS2-8d12.q1k vc_1 246 62 2513 2512 C 185 0.00 287 reject_low 2 ALIGNMENT 187 YS2-8d12.p1k chr15 232 25 668487 668695 C 208 98.56 238 accept_chi 1 ALIGNMENT 0 YS2-8d12.q1k vc_7 62 249 13525 13524 F 188 0.00 287 reject_low 7 ALIGNMENT 0 YS2-8d12.q1k vc_2 246 62 2146 2145 C 185 0.00 287 reject_low 3 ALIGNMENT 41 YS2-8d12.q1k vc_2 287 247 2105 2145 C 41 100.00 287 reject_low 3 ALIGNMENT 36 YS2-8d12.q1k vc_5 284 249 1 36 C 36 100.00 287 reject_low 8 ALIGNMENT 0 YS2-8d12.q1k vc_5 248 62 37 36 C 187 0.00 287 reject_low 8 ALIGNMENT 41 YS2-8d12.q1k vc_4 247 287 5831 5871 F 41 100.00 287 reject_low 5 ALIGNMENT 39 YS2-8d12.q1k vc_5 287 249 5025 5063 C 39 100.00 287 reject_low 6 ALIGNMENT 192 YS2-8d12.q1k chr15 39 247 668487 668695 F 209 99.04 287 accept_chi 0 ALIGNMENT 38 YS2-8d12.q1k vc_7 250 287 13525 13562 F 38 100.00 287 reject_low 7 ALIGNMENT 41 YS2-8d12.q1k vc_3 287 247 2472 2512 C 41 100.00 287 reject_low 4 ALIGNMENT 41 YS2-8d12.q1k vc_1 287 247 2472 2512 C 41 100.00 287 reject_low 2 ALIGNMENT 0 YS2-8d12.q1k vc_3 246 62 2513 2512 C 185 0.00 287 reject_low 4 ALIGNMENT 943 YS2-8d13.q1k chr15 1184 40 809074 810241 C 1145 95.37 1223 accept 0 ALIGNMENT 596 YS2-8d14.p1k chr16 29 818 395007 395809 F 790 92.78 1072 accept 0 ALIGNMENT 947 YS2-8d14.q1k chr16 1127 37 398259 399352 C 1091 96.52 1237 accept 0 ALIGNMENT 42 YS2-8d15.q1k vc_3 265 224 2472 2513 C 42 100.00 265 reject_low 4 ALIGNMENT 42 YS2-8d15.q1k vc_2 265 224 2105 2146 C 42 100.00 265 reject_low 3 ALIGNMENT 153 YS2-8d15.p1k chr11 211 27 249478 249664 C 185 95.68 229 accept_chi 1 ALIGNMENT 42 YS2-8d15.q1k vc_4 224 265 5830 5871 F 42 100.00 265 reject_low 5 ALIGNMENT 0 YS2-8d15.q1k vc_4 62 223 5830 5829 F 162 0.00 265 reject_low 5 ALIGNMENT 0 YS2-8d15.q1k vc_5 226 62 5064 5063 C 165 0.00 265 reject_low 6 ALIGNMENT 38 YS2-8d15.q1k vc_7 228 265 13525 13562 F 38 100.00 265 reject_low 7 ALIGNMENT 42 YS2-8d15.q1k vc_1 265 224 2472 2513 C 42 100.00 265 reject_low 2 ALIGNMENT 39 YS2-8d15.q1k vc_5 265 227 5025 5063 C 39 100.00 265 reject_low 6 ALIGNMENT 0 YS2-8d15.q1k vc_2 223 62 2147 2146 C 162 0.00 265 reject_low 3 ALIGNMENT 166 YS2-8d15.q1k chr11 38 224 249478 249664 F 187 97.33 265 accept_chi 0 ALIGNMENT 0 YS2-8d15.q1k vc_7 62 227 13525 13524 F 166 0.00 265 reject_low 7 ALIGNMENT 0 YS2-8d15.p1k chr11 229 212 249479 249478 C 18 0.00 229 accept_chi 1 ALIGNMENT 0 YS2-8d15.q1k vc_1 223 62 2514 2513 C 162 0.00 265 reject_low 2 ALIGNMENT 0 YS2-8d15.q1k chr11 225 265 249664 249663 F 41 0.00 265 accept_chi 0 ALIGNMENT 0 YS2-8d15.q1k vc_3 223 62 2514 2513 C 162 0.00 265 reject_low 4 ALIGNMENT 0 YS2-8d15.q1k vc_5 226 62 37 36 C 165 0.00 265 reject_low 8 ALIGNMENT 36 YS2-8d15.q1k vc_5 262 227 1 36 C 36 100.00 265 reject_low 8 ALIGNMENT 925 YS2-8d16.q1k chr12 44 1096 455656 456696 F 1053 96.49 1247 accept 0 ALIGNMENT 925 YS2-8d16.q1k chr12 44 1096 464793 465833 F 1053 96.49 1247 accept 1 ALIGNMENT 90 YS2-8d17.q1k chr03 508 630 83053 83176 F 123 93.50 647 reject_low 25 ALIGNMENT 0 YS2-8d17.q1k chr16 508 62 56789 56788 C 447 0.00 647 reject_low 9 ALIGNMENT 0 YS2-8d17.q1k chr12 62 508 481562 481561 F 447 0.00 647 reject_low 7 ALIGNMENT 106 YS2-8d17.q1k chr13 509 641 362586 362718 F 133 95.49 647 reject_low 17 ALIGNMENT 0 YS2-8d17.q1k chr16 62 508 850625 850624 F 447 0.00 647 reject_low 10 ALIGNMENT 0 YS2-8d17.q1k chr01 62 508 165827 165826 F 447 0.00 647 reject_low 5 ALIGNMENT 112 YS2-8d17.q1k chr16 641 509 56656 56788 C 133 96.99 647 reject_low 9 ALIGNMENT 0 YS2-8d17.q1k chr13 62 528 372716 372715 F 467 0.00 647 reject_low 20 ALIGNMENT 0 YS2-8d17.q1k chr16 507 62 560811 560810 C 446 0.00 647 reject_low 12 ALIGNMENT 0 YS2-8d17.q1k chr10 508 62 472715 472714 C 447 0.00 647 reject_low 15 ALIGNMENT 0 YS2-8d17.q1k chr03 631 647 83176 83175 F 17 0.00 647 reject_low 25 ALIGNMENT 0 YS2-8d17.q1k chr13 62 528 378304 378303 F 467 0.00 647 reject_low 21 ALIGNMENT 110 YS2-8d17.q1k chr16 641 508 560677 560810 C 134 96.27 647 reject_low 12 ALIGNMENT 106 YS2-8d17.q1k chr10 641 509 472582 472714 C 133 95.49 647 reject_low 15 ALIGNMENT 0 YS2-8d17.q1k chr05 62 507 443392 443391 F 446 0.00 647 reject_low 11 ALIGNMENT 112 YS2-8d17.q1k chr16 509 641 850625 850757 F 133 96.99 647 reject_low 10 ALIGNMENT 113 YS2-8d17.q1k chr03 641 508 82903 83036 C 134 97.01 647 reject_low 3 ALIGNMENT 0 YS2-8d17.q1k chr16 62 508 856213 856212 F 447 0.00 647 reject_low 14 ALIGNMENT 112 YS2-8d17.q1k chr01 509 641 165827 165959 F 133 96.99 647 reject_low 5 ALIGNMENT 101 YS2-8d17.q1k chr13 529 641 372716 372828 F 113 98.23 647 reject_low 20 ALIGNMENT 108 YS2-8d17.q1k chr13 507 641 357002 357136 F 135 95.56 647 reject_low 13 ALIGNMENT 112 YS2-8d17.q1k chr01 509 641 160239 160371 F 133 96.99 647 reject_low 4 ALIGNMENT 110 YS2-8d17.q1k chr05 508 641 443392 443525 F 134 96.27 647 reject_low 11 ALIGNMENT 0 YS2-8d17.q1k chr14 62 508 102192 102191 F 447 0.00 647 reject_low 8 ALIGNMENT 0 YS2-8d17.q1k chr15 528 62 595133 595132 C 467 0.00 647 reject_low 22 ALIGNMENT 0 YS2-8d17.q1k chr05 62 508 448980 448979 F 447 0.00 647 reject_low 6 ALIGNMENT 101 YS2-8d17.q1k chr13 641 529 184369 184481 C 113 98.23 647 reject_low 19 ALIGNMENT 101 YS2-8d17.q1k chr02 641 529 259775 259887 C 113 98.23 647 reject_low 18 ALIGNMENT 0 YS2-8d17.q1k chr15 62 508 113293 113292 F 447 0.00 647 reject_low 2 ALIGNMENT 0 YS2-8d17.q1k chr13 62 506 357002 357001 F 445 0.00 647 reject_low 13 ALIGNMENT 0 YS2-8d17.q1k chr03 62 507 83053 83052 F 446 0.00 647 reject_low 25 ALIGNMENT 0 YS2-8d17.q1k chr13 62 508 362586 362585 F 447 0.00 647 reject_low 17 ALIGNMENT 114 YS2-8d17.q1k chr14 503 641 96604 96742 F 139 96.40 647 reject_low 1 ALIGNMENT 112 YS2-8d17.q1k chr12 509 641 481562 481694 F 133 96.99 647 reject_low 7 ALIGNMENT 112 YS2-8d17.q1k chr05 509 641 448980 449112 F 133 96.99 647 reject_low 6 ALIGNMENT 101 YS2-8d17.q1k chr15 641 529 595020 595132 C 113 98.23 647 reject_low 22 ALIGNMENT 99 YS2-8d17.q1k chr15 509 646 113293 113430 F 138 92.75 647 reject_low 2 ALIGNMENT 0 YS2-8d17.q1k chr14 505 62 525067 525066 C 444 0.00 647 reject_low 23 ALIGNMENT 0 YS2-8d17.q1k chr13 508 62 196669 196668 C 447 0.00 647 reject_low 16 ALIGNMENT 94 YS2-8d17.q1k chr14 641 506 524931 525066 C 136 91.91 647 reject_low 23 ALIGNMENT 0 YS2-8d17.q1k chr03 507 62 83037 83036 C 446 0.00 647 reject_low 3 ALIGNMENT 106 YS2-8d17.q1k chr13 641 509 196536 196668 C 133 95.49 647 reject_low 16 ALIGNMENT 101 YS2-8d17.q1k chr13 529 641 378304 378416 F 113 98.23 647 reject_low 21 ALIGNMENT 0 YS2-8d17.q1k chr13 528 62 184482 184481 C 467 0.00 647 reject_low 19 ALIGNMENT 0 YS2-8d17.q1k chr14 508 62 519498 519497 C 447 0.00 647 reject_low 24 ALIGNMENT 112 YS2-8d17.q1k chr14 509 641 102192 102324 F 133 96.99 647 reject_low 8 ALIGNMENT 0 YS2-8d17.q1k chr01 62 508 160239 160238 F 447 0.00 647 reject_low 4 ALIGNMENT 0 YS2-8d17.q1k chr02 528 62 259888 259887 C 467 0.00 647 reject_low 18 ALIGNMENT 109 YS2-8d17.q1k chr16 509 641 856213 856345 F 133 96.24 647 reject_low 14 ALIGNMENT 0 YS2-8d17.q1k chr14 62 502 96604 96603 F 441 0.00 647 reject_low 1 ALIGNMENT 579 YS2-8d17.q1k chr12 30 647 817594 818211 F 618 99.68 647 accept 0 ALIGNMENT 91 YS2-8d17.q1k chr14 641 509 519365 519497 C 133 91.73 647 reject_low 24 ALIGNMENT 823 YS2-8d20.q1k chr04 1061 44 679751 680773 C 1018 94.20 1078 accept 0 ALIGNMENT 998 YS2-8d21.q1k chr11 1131 40 291366 292459 C 1092 97.89 1134 accept 0 ALIGNMENT 959 YS2-8d21.p1k chr11 31 1113 287478 288566 F 1083 97.23 1238 accept 0 ALIGNMENT 940 YS2-8d22.q1k chr11 1100 35 410064 411132 C 1066 97.37 1100 accept 0 ALIGNMENT 1034 YS2-8d22.p1k chr11 32 1240 409542 410755 F 1209 96.20 1250 accept 0 ALIGNMENT 0 YS2-8d23.q1k vc_4 62 659 5831 5830 F 598 0.00 700 reject_low 5 ALIGNMENT 41 YS2-8d23.q1k vc_3 700 660 2472 2512 C 41 100.00 700 reject_low 4 ALIGNMENT 0 YS2-8d23.q1k vc_3 659 62 2513 2512 C 598 0.00 700 reject_low 4 ALIGNMENT 0 YS2-8d23.q1k vc_7 62 662 63 62 F 601 0.00 700 reject_low 7 ALIGNMENT 38 YS2-8d23.q1k vc_7 663 700 13525 13562 F 38 100.00 700 reject_low 8 ALIGNMENT 39 YS2-8d23.q1k vc_5 700 662 5025 5063 C 39 100.00 700 reject_low 6 ALIGNMENT 41 YS2-8d23.q1k vc_2 700 660 2105 2145 C 41 100.00 700 reject_low 3 ALIGNMENT 580 YS2-8d23.p1k chr14 651 31 763445 764065 C 621 98.55 669 ambiguous_tel 1 ALIGNMENT 0 YS2-8d23.q1k vc_5 661 62 37 36 C 600 0.00 700 reject_low 9 ALIGNMENT 0 YS2-8d23.q1k vc_7 62 662 13525 13524 F 601 0.00 700 reject_low 8 ALIGNMENT 38 YS2-8d23.q1k vc_7 663 700 63 100 F 38 100.00 700 reject_low 7 ALIGNMENT 41 YS2-8d23.q1k vc_4 660 700 5831 5871 F 41 100.00 700 reject_low 5 ALIGNMENT 0 YS2-8d23.p1k chr14 669 652 763446 763445 C 18 0.00 669 ambiguous_tel 1 ALIGNMENT 0 YS2-8d23.q1k chr14 660 700 764065 764064 F 41 0.00 700 ambiguous_tel 0 ALIGNMENT 41 YS2-8d23.q1k vc_1 700 660 2472 2512 C 41 100.00 700 reject_low 2 ALIGNMENT 0 YS2-8d23.q1k vc_2 659 62 2146 2145 C 598 0.00 700 reject_low 3 ALIGNMENT 0 YS2-8d23.q1k vc_1 659 62 2513 2512 C 598 0.00 700 reject_low 2 ALIGNMENT 0 YS2-8d23.q1k vc_5 661 62 5064 5063 C 600 0.00 700 reject_low 6 ALIGNMENT 583 YS2-8d23.q1k chr14 39 659 763445 764065 F 621 98.71 700 ambiguous_tel 0 ALIGNMENT 36 YS2-8d23.q1k vc_5 697 662 1 36 C 36 100.00 700 reject_low 9 ALIGNMENT 990 YS2-8d24.q1k chr16 31 1096 628115 629179 F 1066 98.22 1096 accept 0 ALIGNMENT 1030 YS2-8d24.p1k chr16 1179 26 628804 629961 C 1154 96.71 1180 accept 0 ALIGNMENT 1054 YS2-8e01.q1k chr07 1160 28 591771 592906 C 1133 98.06 1162 accept 0 ALIGNMENT 0 YS2-8e02.q1k vc_5 526 62 5064 5063 C 465 0.00 565 reject_low 6 ALIGNMENT 0 YS2-8e02.q1k vc_1 524 62 2513 2512 C 463 0.00 565 reject_low 2 ALIGNMENT 0 YS2-8e02.p1k chr07 520 538 625257 625256 F 19 0.00 538 accept_chi 1 ALIGNMENT 463 YS2-8e02.p1k chr07 32 519 624770 625257 F 488 98.77 538 accept_chi 1 ALIGNMENT 41 YS2-8e02.q1k vc_2 565 525 2105 2145 C 41 100.00 565 reject_low 3 ALIGNMENT 0 YS2-8e02.q1k vc_2 524 62 2146 2145 C 463 0.00 565 reject_low 3 ALIGNMENT 41 YS2-8e02.q1k vc_1 565 525 2472 2512 C 41 100.00 565 reject_low 2 ALIGNMENT 0 YS2-8e02.q1k vc_7 62 527 13525 13524 F 466 0.00 565 reject_low 7 ALIGNMENT 0 YS2-8e02.q1k chr07 565 525 624771 624770 C 41 0.00 565 accept_chi 0 ALIGNMENT 0 YS2-8e02.q1k vc_3 524 62 2513 2512 C 463 0.00 565 reject_low 4 ALIGNMENT 464 YS2-8e02.q1k chr07 524 39 624770 625257 C 486 99.18 565 accept_chi 0 ALIGNMENT 38 YS2-8e02.q1k vc_7 528 565 13525 13562 F 38 100.00 565 reject_low 7 ALIGNMENT 39 YS2-8e02.q1k vc_5 565 527 5025 5063 C 39 100.00 565 reject_low 6 ALIGNMENT 0 YS2-8e02.q1k vc_4 62 524 5831 5830 F 463 0.00 565 reject_low 5 ALIGNMENT 41 YS2-8e02.q1k vc_3 565 525 2472 2512 C 41 100.00 565 reject_low 4 ALIGNMENT 41 YS2-8e02.q1k vc_4 525 565 5831 5871 F 41 100.00 565 reject_low 5 ALIGNMENT 0 YS2-8e02.q1k vc_5 526 62 37 36 C 465 0.00 565 reject_low 8 ALIGNMENT 36 YS2-8e02.q1k vc_5 562 527 1 36 C 36 100.00 565 reject_low 8 ALIGNMENT 932 YS2-8e03.q1k chr07 1079 39 597377 598431 C 1041 96.93 1183 accept 0 ALIGNMENT 910 YS2-8e03.p1k chr07 31 1051 594166 595193 F 1021 97.16 1322 accept 0 ALIGNMENT 952 YS2-8e04.p1k chr12 38 1066 846710 847743 F 1029 98.64 1324 accept 0 ALIGNMENT 986 YS2-8e04.q1k chr12 1154 36 847656 848775 C 1119 96.78 1243 accept 0 ALIGNMENT 41 YS2-8e07.q1k vc_1 273 233 2472 2512 C 41 100.00 273 reject_low 2 ALIGNMENT 41 YS2-8e07.q1k vc_3 273 233 2472 2512 C 41 100.00 273 reject_low 4 ALIGNMENT 189 YS2-8e07.q1k chr05 38 233 162606 162801 F 196 100.00 273 accept_chi 0 ALIGNMENT 0 YS2-8e07.q1k vc_1 232 62 2513 2512 C 171 0.00 273 reject_low 2 ALIGNMENT 0 YS2-8e07.q1k vc_7 62 235 13525 13524 F 174 0.00 273 reject_low 7 ALIGNMENT 41 YS2-8e07.q1k vc_2 273 233 2105 2145 C 41 100.00 273 reject_low 3 ALIGNMENT 0 YS2-8e07.q1k vc_2 232 62 2146 2145 C 171 0.00 273 reject_low 3 ALIGNMENT 41 YS2-8e07.q1k vc_4 233 273 5831 5871 F 41 100.00 273 reject_low 5 ALIGNMENT 0 YS2-8e07.q1k vc_3 232 62 2513 2512 C 171 0.00 273 reject_low 4 ALIGNMENT 181 YS2-8e07.p1k chr05 223 29 162606 162801 C 195 98.97 240 accept_chi 1 ALIGNMENT 0 YS2-8e07.p1k chr05 240 224 162607 162606 C 17 0.00 240 accept_chi 1 ALIGNMENT 38 YS2-8e07.q1k vc_7 236 273 13525 13562 F 38 100.00 273 reject_low 7 ALIGNMENT 0 YS2-8e07.q1k vc_4 62 232 5831 5830 F 171 0.00 273 reject_low 5 ALIGNMENT 0 YS2-8e07.q1k vc_5 234 62 5064 5063 C 173 0.00 273 reject_low 6 ALIGNMENT 0 YS2-8e07.q1k vc_5 234 62 37 36 C 173 0.00 273 reject_low 8 ALIGNMENT 39 YS2-8e07.q1k vc_5 273 235 5025 5063 C 39 100.00 273 reject_low 6 ALIGNMENT 0 YS2-8e07.q1k chr05 234 273 162801 162800 F 40 0.00 273 accept_chi 0 ALIGNMENT 36 YS2-8e07.q1k vc_5 270 235 1 36 C 36 100.00 273 reject_low 8 ALIGNMENT 1002 YS2-8e08.q1k chr11 1248 29 410923 412146 C 1220 95.49 1248 accept 0 ALIGNMENT 913 YS2-8e08.p1k chr11 22 1125 410802 411922 F 1104 94.93 1326 accept 0 ALIGNMENT 928 YS2-8e10.q1k chr04 40 1123 748210 749306 F 1084 96.96 1248 accept 0 ALIGNMENT 1014 YS2-8e10.p1k chr04 1152 37 751597 752719 C 1116 97.85 1285 accept 0 ALIGNMENT 1027 YS2-8e11.q1k chr08 41 1215 498416 499580 F 1175 96.60 1285 accept 0 ALIGNMENT 964 YS2-8e11.p1k chr08 1207 31 502842 504026 C 1177 94.73 1319 accept 0 ALIGNMENT 0 YS2-8e13.q1k vc_3 419 62 2513 2512 C 358 0.00 460 reject_low 3 ALIGNMENT 38 YS2-8e13.q1k vc_7 423 460 13525 13562 F 38 100.00 460 reject_low 6 ALIGNMENT 41 YS2-8e13.q1k vc_3 460 420 2472 2512 C 41 100.00 460 reject_low 3 ALIGNMENT 0 YS2-8e13.q1k vc_5 421 62 5064 5063 C 360 0.00 460 reject_low 5 ALIGNMENT 367 YS2-8e13.q1k chr05 419 38 469684 470065 C 382 100.00 460 accept_chi 0 ALIGNMENT 41 YS2-8e13.q1k vc_4 420 460 5831 5871 F 41 100.00 460 reject_low 4 ALIGNMENT 0 YS2-8e13.q1k vc_7 62 422 13525 13524 F 361 0.00 460 reject_low 6 ALIGNMENT 39 YS2-8e13.q1k vc_5 460 422 5025 5063 C 39 100.00 460 reject_low 5 ALIGNMENT 36 YS2-8e13.q1k vc_5 457 422 1 36 C 36 100.00 460 reject_low 7 ALIGNMENT 0 YS2-8e13.p1k chr05 412 430 470065 470064 F 19 0.00 430 accept_chi 1 ALIGNMENT 0 YS2-8e13.q1k vc_5 421 62 37 36 C 360 0.00 460 reject_low 7 ALIGNMENT 41 YS2-8e13.q1k vc_1 460 420 2472 2512 C 41 100.00 460 reject_low 2 ALIGNMENT 0 YS2-8e13.q1k vc_4 62 419 5831 5830 F 358 0.00 460 reject_low 4 ALIGNMENT 0 YS2-8e13.q1k chr05 460 420 469685 469684 C 41 0.00 460 accept_chi 0 ALIGNMENT 0 YS2-8e13.q1k vc_1 419 62 2513 2512 C 358 0.00 460 reject_low 2 ALIGNMENT 361 YS2-8e13.p1k chr05 30 411 469684 470065 F 382 99.48 430 accept_chi 1 ALIGNMENT 958 YS2-8e14.q1k chr12 31 1189 1010101 1011267 F 1159 94.91 1284 accept 0 ALIGNMENT 970 YS2-8e15.p1k chr07 1173 31 470984 472133 C 1143 95.54 1289 accept 0 ALIGNMENT 1009 YS2-8e15.q1k chr07 31 1198 469914 471089 F 1168 96.40 1225 accept 0 ALIGNMENT 0 YS2-8e17.p1k chrm 194 205 490 621 F 12 0.00 1378 accept 0 ALIGNMENT 36 YS2-8e17.p1k chrm 934 975 53828 53869 F 42 97.62 1378 reject_low 16 ALIGNMENT 45 YS2-8e17.p1k chrm 933 991 81404 81463 F 59 91.53 1378 reject_low 3,4,18 ALIGNMENT 0 YS2-8e17.q1k chrm 912 193 83097 84465 C 720 0.00 1247 reject_low 18 ALIGNMENT 0 YS2-8e17.q1k chrm 879 62 9110 9109 C 818 0.00 1247 reject_low 2 ALIGNMENT 0 YS2-8e17.p1k chrm 62 932 81404 81403 F 871 0.00 1378 reject_low 3,4,18 ALIGNMENT 47 YS2-8e17.q1k chrm 955 880 9032 9109 C 76 88.16 1247 reject_low 2 ALIGNMENT 39 YS2-8e17.q1k chrm 955 906 84488 84537 C 50 94.00 1247 reject_low 4 ALIGNMENT 0 YS2-8e17.q1k chrm 62 130 85 84 F 69 0.00 1247 reject_low 12 ALIGNMENT 45 YS2-8e17.q1k chrm 192 131 84466 84529 C 62 91.94 1247 reject_low 18 ALIGNMENT 38 YS2-8e17.q1k chrm 955 913 8236 8278 C 43 100.00 1247 reject_low 8 ALIGNMENT 40 YS2-8e17.q1k chrm 174 131 9030 9073 C 44 100.00 1247 reject_low 8 ALIGNMENT 0 YS2-8e17.q1k chrm 838 180 83048 83047 C 659 0.00 1247 reject_low 3 ALIGNMENT 37 YS2-8e17.p1k chrm 933 975 83054 83096 F 43 97.67 1378 reject_low 14 ALIGNMENT 37 YS2-8e17.p1k chrm 975 933 52331 52373 C 43 97.67 1378 reject_low 13 ALIGNMENT 0 YS2-8e17.q1k chrm 912 175 8279 9029 C 738 0.00 1247 reject_low 8 ALIGNMENT 0 YS2-8e17.p1k chrm 932 62 52374 52373 C 871 0.00 1378 reject_low 13 ALIGNMENT 36 YS2-8e17.p1k chrm 933 974 2095 2136 F 42 97.62 1378 reject_low 15 ALIGNMENT 0 YS2-8e17.q1k chrm 112 62 83114 83113 C 51 0.00 1247 reject_low 3 ALIGNMENT 46 YS2-8e17.q1k chrm 188 131 8218 8277 C 58 94.83 1247 reject_low 6 ALIGNMENT 0 YS2-8e17.p1k chrm 932 62 57072 57071 C 871 0.00 1378 reject_low 9 ALIGNMENT 0 YS2-8e17.p1k chrm 62 932 83054 83053 F 871 0.00 1378 reject_low 14 ALIGNMENT 275 YS2-8e17.q1k chrm 923 123 1424 2144 C 801 87.89 1247 reject_low 1 ALIGNMENT 0 YS2-8e17.q1k chrm 980 956 1351 9031 C 25 0.00 1247 reject_low 2 ALIGNMENT 49 YS2-8e17.q1k chrm 179 113 83047 83113 C 67 91.04 1247 reject_low 3 ALIGNMENT 0 YS2-8e17.p1k chrm 62 927 66822 66821 F 866 0.00 1378 reject_low 11 ALIGNMENT 23 YS2-8e17.q1k chrm 347 302 62608 62653 C 46 93.48 1247 reject_low 5 ALIGNMENT 46 YS2-8e17.q1k chrm 1092 981 1242 1350 C 112 90.18 1247 accept 0 reject_low 1,2 ALIGNMENT 0 YS2-8e17.q1k chrm 301 62 62654 62653 C 240 0.00 1247 reject_low 5 ALIGNMENT 0 YS2-8e17.q1k chrm 122 62 2145 2144 C 61 0.00 1247 reject_low 1 ALIGNMENT 0 YS2-8e17.q1k chrm 980 924 1351 1423 C 57 0.00 1247 reject_low 1 ALIGNMENT 41 YS2-8e17.q1k chrm 131 179 85 133 F 49 95.92 1247 reject_low 12 ALIGNMENT 81 YS2-8e17.p1k chrm 37 193 333 489 F 157 93.63 1378 accept 0 reject_low 1 ALIGNMENT 316 YS2-8e17.p1k chrm 206 906 622 1350 F 701 90.30 1378 accept 0 ALIGNMENT 37 YS2-8e17.q1k chrm 955 914 62862 62903 C 42 100.00 1247 reject_low 7 ALIGNMENT 42 YS2-8e17.p1k chrm 965 1079 1424 1544 F 115 83.48 1378 reject_low 6,8 ALIGNMENT 0 YS2-8e17.q1k chrm 838 348 62609 62608 C 491 0.00 1247 reject_low 5 ALIGNMENT 0 YS2-8e17.q1k chrm 913 62 62904 62903 C 852 0.00 1247 reject_low 7 ALIGNMENT 0 YS2-8e17.q1k chrm 130 62 84530 84529 C 69 0.00 1247 reject_low 18 ALIGNMENT 0 YS2-8e17.p1k chrm 62 938 65778 65777 F 877 0.00 1378 reject_low 17 ALIGNMENT 0 YS2-8e17.q1k chrm 62 912 84 83 F 851 0.00 1247 reject_low 10 ALIGNMENT 0 YS2-8e17.q1k chrm 913 189 2137 8217 C 725 0.00 1247 reject_low 6 ALIGNMENT 36 YS2-8e17.q1k chrm 913 953 84 124 F 41 100.00 1247 reject_low 10 ALIGNMENT 41 YS2-8e17.p1k chrm 928 974 66822 66868 F 47 95.74 1378 reject_low 11 ALIGNMENT 0 YS2-8e17.q1k chrm 905 62 84538 84537 C 844 0.00 1247 reject_low 4 ALIGNMENT 0 YS2-8e17.q1k chrm 180 838 133 132 F 659 0.00 1247 reject_low 12 ALIGNMENT 0 YS2-8e17.p1k chrm 62 932 2095 2094 F 871 0.00 1378 reject_low 15 ALIGNMENT 0 YS2-8e17.p1k chrm 62 964 1424 1423 F 903 0.00 1378 reject_low 6,8 ALIGNMENT 283 YS2-8e17.q1k chrm 842 28 1507 2240 C 815 88.96 1247 accept 0 ALIGNMENT 0 YS2-8e17.q1k chrm 130 62 9074 9073 C 69 0.00 1247 reject_low 8 ALIGNMENT 0 YS2-8e17.p1k chrm 194 534 490 977 F 341 0.00 1378 reject_low 1 ALIGNMENT 0 YS2-8e17.p1k chrm 907 928 1350 1349 F 22 0.00 1378 accept 0 ALIGNMENT 0 YS2-8e17.p1k chrm 62 933 53828 53827 F 872 0.00 1378 reject_low 16 ALIGNMENT 31 YS2-8e17.p1k chrm 939 984 65778 65823 F 46 89.13 1378 reject_low 17 ALIGNMENT 38 YS2-8e17.q1k chrm 955 913 83054 83096 C 43 100.00 1247 reject_low 18 ALIGNMENT 0 YS2-8e17.q1k chrm 980 843 1351 1506 C 138 0.00 1247 accept 0 ALIGNMENT 0 YS2-8e17.q1k chrm 130 62 8278 8277 C 69 0.00 1247 reject_low 6 ALIGNMENT 36 YS2-8e17.p1k chrm 933 974 48102 48143 F 42 97.62 1378 reject_low 5,7 ALIGNMENT 251 YS2-8e17.p1k chrm 535 1253 978 1715 F 719 84.42 1378 reject_low 1 ALIGNMENT 45 YS2-8e17.p1k chrm 1001 933 57000 57071 C 69 88.41 1378 reject_low 9 ALIGNMENT 37 YS2-8e17.q1k chrm 955 914 2095 2136 C 42 100.00 1247 reject_low 6 ALIGNMENT 0 YS2-8e17.p1k chrm 62 932 48102 48101 F 871 0.00 1378 reject_low 5,7 ALIGNMENT 996 YS2-8e18.p1k chr03 41 1159 65426 66555 F 1119 96.96 1368 accept 0 ALIGNMENT 990 YS2-8e18.q1k chr03 1196 31 69940 71110 C 1166 95.54 1203 accept 0 ALIGNMENT 1001 YS2-8e19.q1k chr02 1211 40 322290 323470 C 1172 95.99 1244 accept 0 ALIGNMENT 985 YS2-8e19.p1k chr02 28 1183 321691 322846 F 1156 95.50 1281 accept 0 ALIGNMENT 26 YS2-8e20.p1k vc_3 869 839 2441 2472 C 31 96.77 1327 reject_low 24 ALIGNMENT 273 YS2-8e20.p1k vc_2 1240 839 1707 2105 C 402 89.80 1327 reject_low 5 ALIGNMENT 0 YS2-8e20.q1k vc_3 62 870 2531 2530 F 809 0.00 1247 reject_low 11 ALIGNMENT 0 YS2-8e20.p1k vc_1 838 62 2473 2472 C 777 0.00 1327 reject_low 23 ALIGNMENT 0 YS2-8e20.q1k chr04 886 833 1297021 1297020 C 54 0.00 1247 accept_chi 0 ALIGNMENT 0 YS2-8e20.q1k vc_3 886 872 2473 2472 C 15 0.00 1247 reject_low 19 ALIGNMENT 785 YS2-8e20.q1k chr04 832 36 1297020 1297817 C 797 99.87 1247 accept_chi 0 ALIGNMENT 0 YS2-8e20.q1k vc_7 1029 62 6412 6411 C 968 0.00 1247 reject_low 16 ALIGNMENT 0 YS2-8e20.p1k vc_2 838 62 2106 2105 C 777 0.00 1327 reject_low 5 ALIGNMENT 69 YS2-8e20.q1k vc_4 951 871 1453 1534 C 81 95.06 1247 reject_low 15 ALIGNMENT 0 YS2-8e20.p1k vc_7 62 838 13562 13561 F 777 0.00 1327 reject_low 7 ALIGNMENT 0 YS2-8e20.q1k vc_1 886 872 2473 2472 C 15 0.00 1247 reject_low 17 ALIGNMENT 0 YS2-8e20.p1k vc_3 963 870 2442 2441 C 94 0.00 1327 reject_low 24 ALIGNMENT 0 YS2-8e20.q1k vc_4 62 870 126 125 F 809 0.00 1247 reject_low 13 ALIGNMENT 40 YS2-8e20.q1k vc_1 871 832 2472 2511 C 40 100.00 1247 reject_low 17 ALIGNMENT 0 YS2-8e20.q1k vc_4 870 62 1535 1534 C 809 0.00 1247 reject_low 15 ALIGNMENT 0 YS2-8e20.q1k vc_2 886 872 2106 2105 C 15 0.00 1247 reject_low 18 ALIGNMENT 38 YS2-8e20.q1k vc_7 834 871 13525 13562 F 38 100.00 1247 reject_low 21 ALIGNMENT 39 YS2-8e20.q1k vc_5 871 833 5025 5063 C 39 100.00 1247 reject_low 20 ALIGNMENT 46 YS2-8e20.q1k vc_7 1080 1030 6360 6411 C 51 98.04 1247 reject_low 16 ALIGNMENT 0 YS2-8e20.q1k vc_7 872 886 13562 13561 F 15 0.00 1247 reject_low 21 ALIGNMENT 36 YS2-8e20.q1k vc_5 868 833 1 36 C 36 100.00 1247 reject_low 22 ALIGNMENT 229 YS2-8e20.q1k vc_3 871 1209 2531 2871 F 339 89.68 1247 reject_low 11 ALIGNMENT 0 YS2-8e20.q1k vc_5 886 869 2 1 C 18 0.00 1247 reject_low 22 ALIGNMENT 0 YS2-8e20.p1k vc_1 963 870 2442 2441 C 94 0.00 1327 reject_low 23 ALIGNMENT 0 YS2-8e20.p1k vc_5 838 62 5026 5025 C 777 0.00 1327 reject_low 2 ALIGNMENT 0 YS2-8e20.q1k vc_2 831 62 2145 2144 C 770 0.00 1247 reject_low 18 ALIGNMENT 0 YS2-8e20.q1k vc_1 62 870 2531 2530 F 809 0.00 1247 reject_low 9 ALIGNMENT 0 YS2-8e20.q1k vc_7 62 833 13525 13524 F 772 0.00 1247 reject_low 21 ALIGNMENT 0 YS2-8e20.q1k vc_2 62 870 2164 2163 F 809 0.00 1247 reject_low 10 ALIGNMENT 255 YS2-8e20.p1k vc_4 839 1163 5871 6193 F 325 92.92 1327 reject_low 8 ALIGNMENT 273 YS2-8e20.p1k vc_7 839 1240 100 498 F 402 89.80 1327 reject_low 3 ALIGNMENT 0 YS2-8e20.q1k vc_4 870 62 5813 5812 C 809 0.00 1247 reject_low 12 ALIGNMENT 26 YS2-8e20.p1k vc_1 869 839 2441 2472 C 31 96.77 1327 reject_low 23 ALIGNMENT 0 YS2-8e20.q1k vc_5 832 62 37 36 C 771 0.00 1247 reject_low 22 ALIGNMENT 0 YS2-8e20.p1k vc_4 62 838 5871 5870 F 777 0.00 1327 reject_low 8 ALIGNMENT 0 YS2-8e20.q1k vc_3 831 62 2512 2511 C 770 0.00 1247 reject_low 19 ALIGNMENT 0 YS2-8e20.q1k vc_4 62 831 5832 5831 F 770 0.00 1247 reject_low 14 ALIGNMENT 0 YS2-8e20.q1k vc_4 872 871 5872 6353 F 0 0.00 1247 reject_low 14 ALIGNMENT 0 YS2-8e20.q1k vc_5 886 872 5026 5025 C 15 0.00 1247 reject_low 20 ALIGNMENT 0 YS2-8e20.p1k vc_7 62 838 100 99 F 777 0.00 1327 reject_low 3 ALIGNMENT 0 YS2-8e20.q1k vc_7 870 62 2728 2727 C 809 0.00 1247 reject_low 3 ALIGNMENT 273 YS2-8e20.p1k vc_7 839 1240 13562 13960 F 402 89.80 1327 reject_low 7 ALIGNMENT 273 YS2-8e20.p1k vc_1 1240 839 1707 2105 C 402 89.80 1327 reject_low 4 ALIGNMENT 0 YS2-8e20.p1k chr04 823 963 1297817 1297816 F 141 0.00 1327 accept_chi 1 ALIGNMENT 40 YS2-8e20.q1k vc_4 832 871 5832 5871 F 40 100.00 1247 reject_low 14 ALIGNMENT 133 YS2-8e20.q1k vc_4 871 1030 6353 6514 F 160 94.38 1247|1,0 reject_low 14 ALIGNMENT 222 YS2-8e20.q1k vc_4 1209 871 5470 5812 C 339 89.38 1247 reject_low 12 ALIGNMENT 0 YS2-8e20.q1k vc_1 831 62 2512 2511 C 770 0.00 1247 reject_low 17 ALIGNMENT 273 YS2-8e20.p1k vc_3 1240 839 1707 2105 C 402 89.80 1327 reject_low 6 ALIGNMENT 229 YS2-8e20.q1k vc_1 871 1209 2531 2871 F 339 89.68 1247 reject_low 9 ALIGNMENT 40 YS2-8e20.q1k vc_3 871 832 2472 2511 C 40 100.00 1247 reject_low 19 ALIGNMENT 0 YS2-8e20.q1k vc_5 832 62 5064 5063 C 771 0.00 1247 reject_low 20 ALIGNMENT 0 YS2-8e20.p1k vc_1 838 62 2106 2105 C 777 0.00 1327 reject_low 4 ALIGNMENT 229 YS2-8e20.q1k vc_7 1209 871 2387 2727 C 339 89.97 1247 reject_low 3 ALIGNMENT 273 YS2-8e20.p1k vc_5 1240 839 4627 5025 C 402 89.80 1327 reject_low 2 ALIGNMENT 0 YS2-8e20.p1k vc_3 838 62 2473 2472 C 777 0.00 1327 reject_low 24 ALIGNMENT 40 YS2-8e20.q1k vc_2 871 832 2105 2144 C 40 100.00 1247 reject_low 18 ALIGNMENT 0 YS2-8e20.q1k vc_5 62 870 2398 2397 F 809 0.00 1247 reject_low 2 ALIGNMENT 229 YS2-8e20.q1k vc_5 871 1209 2398 2738 F 339 89.68 1247 reject_low 2 ALIGNMENT 784 YS2-8e20.p1k chr04 26 822 1297020 1297817 F 797 99.87 1327 accept_chi 1 ALIGNMENT 229 YS2-8e20.q1k vc_2 871 1209 2164 2504 F 339 89.68 1247 reject_low 10 ALIGNMENT 0 YS2-8e20.p1k vc_3 838 62 2106 2105 C 777 0.00 1327 reject_low 6 ALIGNMENT 133 YS2-8e20.q1k vc_4 871 1030 126 287 F 160 94.38 1247 reject_low 13 ALIGNMENT 977 YS2-8e24.q1k chr10 36 1152 692653 693774 F 1117 96.78 1154 accept_chi 0 ALIGNMENT 945 YS2-8e24.p1k chr04 1158 38 440073 441207 C 1121 95.63 1252 accept_chi 1 ALIGNMENT 947 YS2-8f02.q1k chr04 1149 41 679664 680778 C 1109 95.94 1186 accept 0 ALIGNMENT 763 YS2-8f03.q1k chr12 39 1106 458512 459543 F 1068 93.63 1243 accept 0 ALIGNMENT 988 YS2-8f03.p1k chr12 1108 30 453660 454742 C 1079 96.94 1349 reject_low 1 ALIGNMENT 988 YS2-8f03.p1k chr12 1108 30 462797 463879 C 1079 96.94 1349 accept 0 ALIGNMENT 0 YS2-8f03.q1k chr06 875 62 31730 31729 C 814 0.00 1243 reject_low 3 ALIGNMENT 91 YS2-8f03.q1k chr06 980 876 31625 31729 C 105 98.10 1243 reject_low 3 ALIGNMENT 763 YS2-8f03.q1k chr12 39 1106 467649 468680 F 1068 93.63 1243 reject_low 2 ALIGNMENT 913 YS2-8f04.q1k chr04 38 1085 949214 950272 F 1048 97.04 1200 accept 0 ALIGNMENT 1040 YS2-8f05.q1k chr16 39 1239 384587 385800 F 1201 97.09 1292 accept 0 ALIGNMENT 990 YS2-8f06.q1k chr14 1161 39 202658 203788 C 1123 96.62 1268 accept 0 ALIGNMENT 745 YS2-8f07.q1k chr12 1077 30 457967 458979 C 1048 93.32 1233 accept 0 ALIGNMENT 745 YS2-8f07.q1k chr12 1077 30 467104 468116 C 1048 93.32 1233 accept 1 ALIGNMENT 0 YS2-8f09.q1k vc_3 254 62 2513 2512 C 193 0.00 295 reject_low 4 ALIGNMENT 41 YS2-8f09.q1k vc_1 295 255 2472 2512 C 41 100.00 295 reject_low 2 ALIGNMENT 0 YS2-8f09.q1k vc_5 256 62 37 36 C 195 0.00 295 reject_low 8 ALIGNMENT 0 YS2-8f09.q1k vc_4 62 254 5831 5830 F 193 0.00 295 reject_low 5 ALIGNMENT 0 YS2-8f09.q1k vc_7 62 257 13525 13524 F 196 0.00 295 reject_low 7 ALIGNMENT 39 YS2-8f09.q1k vc_5 295 257 5025 5063 C 39 100.00 295 reject_low 6 ALIGNMENT 0 YS2-8f09.q1k vc_5 256 62 5064 5063 C 195 0.00 295 reject_low 6 ALIGNMENT 207 YS2-8f09.q1k chr16 39 257 223220 223438 F 219 100.00 295 accept_chi 1 ALIGNMENT 0 YS2-8f09.p1k chr16 265 248 223221 223220 C 18 0.00 265 accept_chi 0 ALIGNMENT 207 YS2-8f09.p1k chr16 247 29 223220 223438 C 219 100.00 265 accept_chi 0 ALIGNMENT 0 YS2-8f09.q1k vc_1 254 62 2513 2512 C 193 0.00 295 reject_low 2 ALIGNMENT 41 YS2-8f09.q1k vc_3 295 255 2472 2512 C 41 100.00 295 reject_low 4 ALIGNMENT 41 YS2-8f09.q1k vc_4 255 295 5831 5871 F 41 100.00 295 reject_low 5 ALIGNMENT 0 YS2-8f09.q1k chr16 258 295 223438 223437 F 38 0.00 295 accept_chi 1 ALIGNMENT 0 YS2-8f09.q1k vc_2 254 62 2146 2145 C 193 0.00 295 reject_low 3 ALIGNMENT 36 YS2-8f09.q1k vc_5 292 257 1 36 C 36 100.00 295 reject_low 8 ALIGNMENT 38 YS2-8f09.q1k vc_7 258 295 13525 13562 F 38 100.00 295 reject_low 7 ALIGNMENT 41 YS2-8f09.q1k vc_2 295 255 2105 2145 C 41 100.00 295 reject_low 3 ALIGNMENT 997 YS2-8f11.q1k chr12 1201 37 891168 892347 C 1165 95.97 1257 accept 0 ALIGNMENT 933 YS2-8f11.p1k chr12 31 1086 890973 892039 F 1056 96.59 1282 accept 0 ALIGNMENT 82 YS2-8f12.q1k vc_4 906 1045 6353 6506 F 140 90.00 1216|1,0 reject_low 9 ALIGNMENT 0 YS2-8f12.q1k vc_4 907 906 5872 6353 F 0 0.00 1216 reject_low 9 ALIGNMENT 0 YS2-8f12.q1k vc_5 867 62 5064 5063 C 806 0.00 1216 reject_low 14 ALIGNMENT 771 YS2-8f12.q1k chr12 865 37 1019431 1020259 C 829 98.91 1216 accept_chi 1 ALIGNMENT 87 YS2-8f12.q1k vc_1 906 1064 2531 2705 F 159 88.68 1216 reject_low 2 ALIGNMENT 41 YS2-8f12.q1k vc_1 906 866 2472 2512 C 41 100.00 1216 reject_low 11 ALIGNMENT 0 YS2-8f12.q1k vc_2 865 62 2146 2145 C 804 0.00 1216 reject_low 12 ALIGNMENT 41 YS2-8f12.q1k vc_4 866 906 5831 5871 F 41 100.00 1216 reject_low 9 ALIGNMENT 0 YS2-8f12.q1k vc_2 62 905 2164 2163 F 844 0.00 1216 reject_low 3 ALIGNMENT 771 YS2-8f12.p1k chr12 28 856 1019431 1020259 F 829 98.91 857 accept_chi 0 ALIGNMENT 0 YS2-8f12.q1k vc_3 865 62 2513 2512 C 804 0.00 1216 reject_low 13 ALIGNMENT 0 YS2-8f12.q1k vc_5 867 62 37 36 C 806 0.00 1216 reject_low 16 ALIGNMENT 0 YS2-8f12.q1k vc_4 905 62 5813 5812 C 844 0.00 1216 reject_low 5 ALIGNMENT 0 YS2-8f12.q1k vc_1 865 62 2513 2512 C 804 0.00 1216 reject_low 11 ALIGNMENT 87 YS2-8f12.q1k vc_2 906 1064 2164 2338 F 159 88.68 1216 reject_low 3 ALIGNMENT 48 YS2-8f12.q1k vc_4 983 906 1450 1534 C 78 91.03 1216 reject_low 10 ALIGNMENT 0 YS2-8f12.q1k vc_4 905 62 1535 1534 C 844 0.00 1216 reject_low 10 ALIGNMENT 38 YS2-8f12.q1k vc_7 869 906 13525 13562 F 38 100.00 1216 reject_low 15 ALIGNMENT 0 YS2-8f12.q1k vc_4 62 865 5831 5830 F 804 0.00 1216 reject_low 9 ALIGNMENT 87 YS2-8f12.q1k vc_3 906 1064 2531 2705 F 159 88.68 1216 reject_low 4 ALIGNMENT 0 YS2-8f12.q1k vc_3 62 905 2531 2530 F 844 0.00 1216 reject_low 4 ALIGNMENT 87 YS2-8f12.q1k vc_5 906 1064 2398 2572 F 159 88.68 1216 reject_low 6 ALIGNMENT 0 YS2-8f12.q1k vc_1 62 905 2531 2530 F 844 0.00 1216 reject_low 2 ALIGNMENT 87 YS2-8f12.q1k vc_4 1064 906 5638 5812 C 159 88.68 1216 reject_low 5 ALIGNMENT 41 YS2-8f12.q1k vc_2 906 866 2105 2145 C 41 100.00 1216 reject_low 12 ALIGNMENT 82 YS2-8f12.q1k vc_4 906 1045 126 279 F 140 90.00 1216 reject_low 8 ALIGNMENT 36 YS2-8f12.q1k vc_5 903 868 1 36 C 36 100.00 1216 reject_low 16 ALIGNMENT 0 YS2-8f12.q1k vc_5 62 905 2398 2397 F 844 0.00 1216 reject_low 6 ALIGNMENT 41 YS2-8f12.q1k vc_3 906 866 2472 2512 C 41 100.00 1216 reject_low 13 ALIGNMENT 0 YS2-8f12.q1k vc_7 62 868 13525 13524 F 807 0.00 1216 reject_low 15 ALIGNMENT 39 YS2-8f12.q1k vc_5 906 868 5025 5063 C 39 100.00 1216 reject_low 14 ALIGNMENT 0 YS2-8f12.q1k vc_4 62 905 126 125 F 844 0.00 1216 reject_low 8 ALIGNMENT 0 YS2-8f12.q1k vc_7 905 62 2728 2727 C 844 0.00 1216 reject_low 7 ALIGNMENT 87 YS2-8f12.q1k vc_7 1064 906 2553 2727 C 159 88.68 1216 reject_low 7 ALIGNMENT 974 YS2-8f13.q1k chr07 40 1204 599203 600387 F 1165 95.36 1276 accept 0 ALIGNMENT 976 YS2-8f13.p1k chr07 1163 28 601448 602591 C 1136 95.95 1362 accept 0 ALIGNMENT 414 YS2-8f14.p1k chr02 908 257 97869 98519 C 652 88.50 1233 accept 0 ALIGNMENT 915 YS2-8f14.q1k chr02 29 1065 94184 95231 F 1037 96.62 1245 accept 0 ALIGNMENT 0 YS2-8f15.q1k vc_4 62 222 5831 5830 F 161 0.00 263 reject_low 4 ALIGNMENT 41 YS2-8f15.q1k vc_1 263 223 2472 2512 C 41 100.00 263 reject_low 2 ALIGNMENT 0 YS2-8f15.q1k chr05 223 263 510224 510223 F 41 0.00 263 accept_chi 0 ALIGNMENT 0 YS2-8f15.q1k vc_5 224 62 5064 5063 C 163 0.00 263 reject_low 5 ALIGNMENT 0 YS2-8f15.q1k vc_7 62 225 13525 13524 F 164 0.00 263 reject_low 6 ALIGNMENT 168 YS2-8f15.p1k chr05 229 37 510029 510221 C 193 98.45 229 accept_chi 1 ALIGNMENT 0 YS2-8f15.q1k vc_5 224 62 37 36 C 163 0.00 263 reject_low 7 ALIGNMENT 41 YS2-8f15.q1k vc_3 263 223 2472 2512 C 41 100.00 263 reject_low 3 ALIGNMENT 0 YS2-8f15.q1k vc_1 222 62 2513 2512 C 161 0.00 263 reject_low 2 ALIGNMENT 36 YS2-8f15.q1k vc_5 260 225 1 36 C 36 100.00 263 reject_low 7 ALIGNMENT 169 YS2-8f15.q1k chr05 28 222 510029 510224 F 195 98.46 263 accept_chi 0 ALIGNMENT 38 YS2-8f15.q1k vc_7 226 263 13525 13562 F 38 100.00 263 reject_low 6 ALIGNMENT 39 YS2-8f15.q1k vc_5 263 225 5025 5063 C 39 100.00 263 reject_low 5 ALIGNMENT 41 YS2-8f15.q1k vc_4 223 263 5831 5871 F 41 100.00 263 reject_low 4 ALIGNMENT 0 YS2-8f15.q1k vc_3 222 62 2513 2512 C 161 0.00 263 reject_low 3 ALIGNMENT 934 YS2-8f16.p1k chr12 1119 25 463137 464233 C 1095 94.89 1158 accept 1 ALIGNMENT 544 YS2-8f16.q1k chr12 42 598 489988 490543 F 557 99.46 1235 reject_low 2 ALIGNMENT 934 YS2-8f16.p1k chr12 1119 25 454000 455096 C 1095 94.89 1158 accept 0 ALIGNMENT 1051 YS2-8f16.q1k chr12 42 1184 461157 462301 F 1143 97.55 1235 accept 1 ALIGNMENT 1051 YS2-8f16.q1k chr12 42 1184 452020 453164 F 1143 97.55 1235 accept 0 ALIGNMENT 0 YS2-8f16.q1k chr12 599 860 490543 490542 F 262 0.00 1235 reject_low 2 ALIGNMENT 1045 YS2-8f17.q1k chr03 38 1251 276025 277242 F 1214 96.79 1264 accept 0 ALIGNMENT 1001 YS2-8f17.p1k chr03 1181 31 276999 278161 C 1151 96.44 1354 accept 0 ALIGNMENT 1020 YS2-8f18.q1k chr07 1213 40 571455 572632 C 1174 96.68 1265 ambiguous_trans 3 ALIGNMENT 1036 YS2-8f18.q1k chr07 40 1213 813524 814700 F 1174 97.02 1265 ambiguous_trans 1 ALIGNMENT 0 YS2-8f18.p1k chr12 62 283 976780 976779 F 222 0.00 1359 reject_low 12 ALIGNMENT 306 YS2-8f18.q1k chr16 1009 108 807502 808404 C 902 78.60 1265 reject_low 14 ALIGNMENT 306 YS2-8f18.q1k chr12 1002 108 217953 218848 C 895 78.66 1265 reject_low 28 ALIGNMENT 0 YS2-8f18.q1k chr12 107 62 479742 479741 C 46 0.00 1265 reject_low 30 ALIGNMENT 0 YS2-8f18.q1k chr16 62 107 846566 846565 F 46 0.00 1265 reject_low 15 ALIGNMENT 640 YS2-8f18.p1k chr13 1027 28 188293 189297 C 1000 89.40 1359 reject_low 13 ALIGNMENT 662 YS2-8f18.p1k chr01 29 986 161031 161992 F 958 91.23 1359 reject_low 23 ALIGNMENT 700 YS2-8f18.p1k chr04 28 1027 646285 647289 F 1000 91.40 1359 reject_low 20 ALIGNMENT 0 YS2-8f18.q1k chr10 62 107 474535 474534 F 46 0.00 1265 reject_low 16 ALIGNMENT 309 YS2-8f18.q1k chr13 108 1009 186322 187224 F 902 78.71 1265 reject_low 13 ALIGNMENT 0 YS2-8f18.q1k chr12 107 62 218849 218848 C 46 0.00 1265 reject_low 28 ALIGNMENT 924 YS2-8f18.p1k chr03 1084 28 88917 89982 C 1057 97.35 1359 ambiguous_trans 2 ALIGNMENT 309 YS2-8f18.q1k chr14 1002 108 99476 100371 C 895 78.77 1265 reject_low 27 ALIGNMENT 624 YS2-8f18.p1k chr05 29 1027 444185 445188 F 999 88.89 1359 reject_low 24 ALIGNMENT 635 YS2-8f18.p1k chr10 984 28 476550 477510 C 957 90.39 1359 reject_low 16 ALIGNMENT 994 YS2-8f18.q1k chr15 1213 40 706775 707951 C 1174 95.91 1265 ambiguous_trans 7 ALIGNMENT 906 YS2-8f18.p1k chr15 28 1084 704851 705916 F 1057 96.78 1359 ambiguous_trans 7 ALIGNMENT 691 YS2-8f18.p1k chr14 1027 28 523271 524275 C 1000 91.10 1359 reject_low 21 ALIGNMENT 312 YS2-8f18.q1k chr10 108 1009 474535 475437 F 902 78.82 1265 reject_low 16 ALIGNMENT 918 YS2-8f18.p1k chr14 28 1084 562820 563885 F 1057 97.16 1359 ambiguous_trans 5 ALIGNMENT 0 YS2-8f18.q1k chr16 107 62 854393 854392 C 46 0.00 1265 reject_low 18 ALIGNMENT 640 YS2-8f18.p1k chr16 1027 28 848540 849544 C 1000 89.40 1359 reject_low 15 ALIGNMENT 429 YS2-8f18.p1k chr10 1027 32 482090 483090 C 996 82.43 1359 reject_low 19 ALIGNMENT 297 YS2-8f18.q1k chr16 1009 108 853490 854392 C 902 78.27 1265 reject_low 18 ALIGNMENT 640 YS2-8f18.p1k chr16 28 1027 805429 806433 F 1000 89.40 1359 reject_low 14 ALIGNMENT 309 YS2-8f18.q1k chr02 108 1009 223194 224096 F 902 78.71 1265 reject_low 26 ALIGNMENT 915 YS2-8f18.p1k chr12 1084 28 945296 946361 C 1057 97.07 1359 ambiguous_trans 4 ALIGNMENT 306 YS2-8f18.q1k chr13 150 1002 198531 199384 F 853 79.25 1265 reject_low 17 ALIGNMENT 626 YS2-8f18.p1k chr16 29 986 851418 852379 F 958 89.98 1359 reject_low 18 ALIGNMENT 0 YS2-8f18.q1k chr13 62 149 198531 198530 F 88 0.00 1265 reject_low 17 ALIGNMENT 1021 YS2-8f18.q1k chr12 40 1213 943261 944437 F 1174 96.51 1265 ambiguous_trans 4 ALIGNMENT 303 YS2-8f18.q1k chr12 987 108 478861 479741 C 880 78.75 1265 reject_low 30 ALIGNMENT 988 YS2-8f18.q1k chr15 40 1213 972354 973530 F 1174 95.57 1265 ambiguous_trans 8 ALIGNMENT 909 YS2-8f18.p1k chr15 1084 28 974389 975454 C 1057 96.88 1359 ambiguous_trans 8 ALIGNMENT 309 YS2-8f18.q1k chr10 108 1009 480119 481021 F 902 78.71 1265 reject_low 19 ALIGNMENT 624 YS2-8f18.p1k chr13 1027 29 200460 201463 C 999 88.89 1359 reject_low 17 ALIGNMENT 991 YS2-8f18.q1k chr04 40 1213 873888 875064 F 1174 95.66 1265 ambiguous_trans 9 ALIGNMENT 1015 YS2-8f18.q1k chr14 1213 40 564744 565920 C 1174 96.51 1265 ambiguous_trans 5 ALIGNMENT 924 YS2-8f18.p1k chr07 1084 28 815559 816624 C 1057 97.35 1359 ambiguous_trans 1 ALIGNMENT 924 YS2-8f18.p1k chr07 28 1084 569531 570596 F 1057 97.35 1359 ambiguous_trans 3 ALIGNMENT 901 YS2-8f18.p1k chr04 28 1072 514471 515523 F 1045 96.94 1359 ambiguous_trans 6 ALIGNMENT 0 YS2-8f18.q1k chr14 107 62 100372 100371 C 46 0.00 1265 reject_low 27 ALIGNMENT 663 YS2-8f18.p1k chr12 284 1084 976780 977589 F 801 95.76 1359 reject_low 12 ALIGNMENT 1009 YS2-8f18.q1k chr02 40 1213 31713 32889 F 1174 96.17 1265 ambiguous_trans 10 ALIGNMENT 0 YS2-8f18.q1k chr13 62 107 186322 186321 F 46 0.00 1265 reject_low 13 ALIGNMENT 1036 YS2-8f18.q1k chr06 40 1213 139980 141156 F 1174 97.02 1265 ambiguous_trans 0 ALIGNMENT 0 YS2-8f18.q1k chr10 62 107 480119 480118 F 46 0.00 1265 reject_low 19 ALIGNMENT 1006 YS2-8f18.q1k chr04 40 1213 983237 984413 F 1174 96.08 1265 ambiguous_trans 11 ALIGNMENT 301 YS2-8f18.q1k chr16 108 1009 846566 847471 F 902 78.60 1265 reject_low 15 ALIGNMENT 306 YS2-8f18.q1k chr15 108 987 596973 597853 F 880 78.86 1265 reject_low 29 ALIGNMENT 1033 YS2-8f18.q1k chr04 1213 40 516395 517571 C 1174 97.02 1265 ambiguous_trans 6 ALIGNMENT 0 YS2-8f18.q1k chr02 62 107 223194 223193 F 46 0.00 1265 reject_low 26 ALIGNMENT 1030 YS2-8f18.q1k chr03 40 1213 86882 88058 F 1174 96.85 1265 ambiguous_trans 2 ALIGNMENT 848 YS2-8f18.p1k chr04 1084 32 985272 986333 C 1053 95.06 1359 ambiguous_trans 11 ALIGNMENT 540 YS2-8f18.p1k chr05 32 1027 493287 494287 F 996 86.14 1359 reject_low 25 ALIGNMENT 924 YS2-8f18.p1k chr06 1084 28 142015 143080 C 1057 97.35 1359 ambiguous_trans 0 ALIGNMENT 1012 YS2-8f18.q1k chr12 1213 40 978448 979624 C 1174 96.34 1265 reject_low 12 ALIGNMENT 0 YS2-8f18.q1k chr16 107 62 808405 808404 C 46 0.00 1265 reject_low 14 ALIGNMENT 892 YS2-8f18.p1k chr02 1072 28 33761 34813 C 1045 96.65 1359 ambiguous_trans 10 ALIGNMENT 0 YS2-8f18.q1k chr15 62 107 596973 596972 F 46 0.00 1265 reject_low 29 ALIGNMENT 678 YS2-8f18.p1k chr04 28 986 879086 880048 F 959 91.76 1359 reject_low 22 ALIGNMENT 897 YS2-8f18.p1k chr04 1084 28 875923 876988 C 1057 96.50 1359 ambiguous_trans 9 ALIGNMENT 41 YS2-8f20.q1k vc_2 565 525 2105 2145 C 41 100.00 565 reject_low 4 ALIGNMENT 0 YS2-8f20.p1k chr04 509 525 925556 925555 F 17 0.00 525 accept_chi 0 ALIGNMENT 445 YS2-8f20.q1k chr04 524 51 925082 925556 C 474 99.16 565 accept_chi 1 ALIGNMENT 0 YS2-8f20.q1k vc_4 62 524 5831 5830 F 463 0.00 565 reject_low 6 ALIGNMENT 0 YS2-8f20.q1k vc_7 62 527 13525 13524 F 466 0.00 565 reject_low 8 ALIGNMENT 0 YS2-8f20.q1k vc_5 520 62 5070 5069 C 459 0.00 565 reject_low 2 ALIGNMENT 0 YS2-8f20.q1k vc_1 524 62 2513 2512 C 463 0.00 565 reject_low 3 ALIGNMENT 39 YS2-8f20.q1k vc_5 562 521 1 42 C 42 97.62 565 reject_low 7 ALIGNMENT 38 YS2-8f20.q1k vc_7 528 565 13525 13562 F 38 100.00 565 reject_low 8 ALIGNMENT 0 YS2-8f20.q1k vc_3 524 62 2513 2512 C 463 0.00 565 reject_low 5 ALIGNMENT 42 YS2-8f20.q1k vc_5 565 521 5025 5069 C 45 97.78 565 reject_low 2 ALIGNMENT 0 YS2-8f20.q1k vc_5 520 62 43 42 C 459 0.00 565 reject_low 7 ALIGNMENT 450 YS2-8f20.p1k chr04 34 508 925082 925556 F 475 99.37 525 accept_chi 0 ALIGNMENT 41 YS2-8f20.q1k vc_3 565 525 2472 2512 C 41 100.00 565 reject_low 5 ALIGNMENT 0 YS2-8f20.q1k chr04 565 525 925083 925082 C 41 0.00 565 accept_chi 1 ALIGNMENT 41 YS2-8f20.q1k vc_4 525 565 5831 5871 F 41 100.00 565 reject_low 6 ALIGNMENT 41 YS2-8f20.q1k vc_1 565 525 2472 2512 C 41 100.00 565 reject_low 3 ALIGNMENT 0 YS2-8f20.q1k vc_2 524 62 2146 2145 C 463 0.00 565 reject_low 4 ALIGNMENT 903 YS2-8f21.p1k chr07 32 1074 725656 726695 F 1043 96.55 1347 accept 0 ALIGNMENT 1017 YS2-8f21.q1k chr07 1121 32 729001 730088 C 1090 98.26 1121 accept 0 ALIGNMENT 995 YS2-8f22.q1k chr15 1104 36 164894 165962 C 1069 98.69 1104 accept 0 ALIGNMENT 985 YS2-8f22.p1k chr15 31 1155 164188 165326 F 1125 96.36 1316 accept 0 ALIGNMENT 47 YS2-8f23.q1k chr04 53 117 2877 2941 F 65 90.77 1171 reject_low 6 ALIGNMENT 0 YS2-8f23.q1k chr07 879 539 1081177 1081176 C 341 0.00 1171 reject_low 3 ALIGNMENT 0 YS2-8f23.q1k chr04 118 879 2941 2940 F 762 0.00 1171 reject_low 6 ALIGNMENT 393 YS2-8f23.q1k chr02 505 53 809953 810404 C 453 96.69 1171 reject_low 4 ALIGNMENT 47 YS2-8f23.q1k chr10 117 53 742775 742839 C 65 90.77 1171 reject_low 7 ALIGNMENT 958 YS2-8f23.q1k chr14 41 1170 9393 10519 F 1130 96.11 1171 ambiguous_tel 1 ALIGNMENT 118 YS2-8f23.q1k chr13 53 205 8313 8465 F 153 93.46 1171 reject_low 5 ALIGNMENT 942 YS2-8f23.q1k chr06 41 1170 7483 8610 F 1130 95.66 1171 ambiguous_tel 2 ALIGNMENT 0 YS2-8f23.q1k chr02 879 506 809954 809953 C 374 0.00 1171 reject_low 4 ALIGNMENT 0 YS2-8f23.q1k chr10 879 118 742776 742775 C 762 0.00 1171 reject_low 7 ALIGNMENT 969 YS2-8f23.p1k chr04 1222 69 430687 431851 C 1154 95.58 1268 accept 0 ALIGNMENT 0 YS2-8f23.q1k chr13 206 879 8465 8464 F 674 0.00 1171 reject_low 5 ALIGNMENT 404 YS2-8f23.q1k chr07 538 41 1081176 1081672 C 498 94.78 1171 reject_low 3 ALIGNMENT 183 YS2-8f24.p1k chr12 213 29 609918 610102 C 185 100.00 231 accept 0 ALIGNMENT 0 YS2-8f24.p1k chr12 231 214 609919 609918 C 18 0.00 231 accept 0 ALIGNMENT 0 YS2-8g01.p1k vc_3 934 62 2473 2472 C 873 0.00 1286 reject_low 22 ALIGNMENT 0 YS2-8g01.q1k vc_4 62 970 126 125 F 909 0.00 1199 reject_low 13 ALIGNMENT 38 YS2-8g01.q1k vc_3 971 931 2472 2512 C 41 97.56 1199 reject_low 18 ALIGNMENT 171 YS2-8g01.p1k vc_1 1267 935 1769 2105 C 333 84.38 1286 reject_low 6 ALIGNMENT 0 YS2-8g01.q1k vc_3 930 62 2513 2512 C 869 0.00 1199 reject_low 18 ALIGNMENT 0 YS2-8g01.q1k vc_5 932 62 5064 5063 C 871 0.00 1199 reject_low 19 ALIGNMENT 101 YS2-8g01.q1k vc_4 1155 971 5637 5812 C 185 88.65 1199 reject_low 12 ALIGNMENT 96 YS2-8g01.q1k vc_4 971 1140 6353 6514 F 170 89.41 1199|1,0 reject_low 14 ALIGNMENT 0 YS2-8g01.p1k vc_7 62 934 13562 13561 F 873 0.00 1286 reject_low 5 ALIGNMENT 0 YS2-8g01.q1k vc_2 62 970 2164 2163 F 909 0.00 1199 reject_low 10 ALIGNMENT 0 YS2-8g01.q1k vc_2 930 62 2146 2145 C 869 0.00 1199 reject_low 17 ALIGNMENT 172 YS2-8g01.p1k vc_7 935 1267 13562 13898 F 333 84.68 1286 reject_low 5 ALIGNMENT 817 YS2-8g01.q1k chr16 37 923 769933 770818 F 887 98.99 1199 accept_chi 0 ALIGNMENT 0 YS2-8g01.q1k vc_7 970 62 2728 2727 C 909 0.00 1199 reject_low 2 ALIGNMENT 0 YS2-8g01.q1k vc_5 932 62 37 36 C 871 0.00 1199 reject_low 23 ALIGNMENT 0 YS2-8g01.q1k vc_5 62 970 2398 2397 F 909 0.00 1199 reject_low 3 ALIGNMENT 0 YS2-8g01.p1k vc_1 934 62 2473 2472 C 873 0.00 1286 reject_low 21 ALIGNMENT 0 YS2-8g01.p1k vc_4 62 934 5871 5870 F 873 0.00 1286 reject_low 4 ALIGNMENT 101 YS2-8g01.q1k vc_5 971 1155 2398 2573 F 185 88.65 1199 reject_low 3 ALIGNMENT 71 YS2-8g01.q1k vc_4 1061 971 1447 1534 C 91 95.60 1199 reject_low 15 ALIGNMENT 172 YS2-8g01.p1k vc_7 935 1267 100 436 F 333 84.68 1286 reject_low 2 ALIGNMENT 101 YS2-8g01.q1k vc_1 971 1155 2531 2706 F 185 88.65 1199 reject_low 9 ALIGNMENT 0 YS2-8g01.q1k vc_1 62 970 2531 2530 F 909 0.00 1199 reject_low 9 ALIGNMENT 38 YS2-8g01.q1k vc_4 931 971 5831 5871 F 41 97.56 1199 reject_low 14 ALIGNMENT 0 YS2-8g01.q1k vc_4 972 971 5872 6353 F 0 0.00 1199 reject_low 14 ALIGNMENT 35 YS2-8g01.q1k vc_7 934 971 13525 13562 F 38 97.37 1199 reject_low 20 ALIGNMENT 26 YS2-8g01.p1k vc_3 965 935 2441 2472 C 31 96.77 1286 reject_low 22 ALIGNMENT 171 YS2-8g01.p1k vc_5 1267 935 4689 5025 C 333 84.38 1286 reject_low 3 ALIGNMENT 36 YS2-8g01.q1k vc_5 971 933 5025 5063 C 39 97.44 1199 reject_low 19 ALIGNMENT 26 YS2-8g01.p1k vc_1 965 935 2441 2472 C 31 96.77 1286 reject_low 21 ALIGNMENT 101 YS2-8g01.q1k vc_7 1155 971 2552 2727 C 185 88.65 1199 reject_low 2 ALIGNMENT 0 YS2-8g01.p1k vc_2 934 62 2106 2105 C 873 0.00 1286 reject_low 7 ALIGNMENT 38 YS2-8g01.q1k vc_2 971 931 2105 2145 C 41 97.56 1199 reject_low 17 ALIGNMENT 0 YS2-8g01.p1k vc_7 62 934 100 99 F 873 0.00 1286 reject_low 2 ALIGNMENT 0 YS2-8g01.p1k vc_5 934 62 5026 5025 C 873 0.00 1286 reject_low 3 ALIGNMENT 38 YS2-8g01.q1k vc_1 971 931 2472 2512 C 41 97.56 1199 reject_low 16 ALIGNMENT 0 YS2-8g01.q1k vc_1 930 62 2513 2512 C 869 0.00 1199 reject_low 16 ALIGNMENT 0 YS2-8g01.p1k vc_3 934 62 2106 2105 C 873 0.00 1286 reject_low 8 ALIGNMENT 0 YS2-8g01.q1k vc_4 970 62 1535 1534 C 909 0.00 1199 reject_low 15 ALIGNMENT 792 YS2-8g01.p1k chr16 917 28 769933 770825 C 890 98.09 1286 accept_chi 1 ALIGNMENT 0 YS2-8g01.p1k vc_1 934 62 2106 2105 C 873 0.00 1286 reject_low 6 ALIGNMENT 33 YS2-8g01.q1k vc_5 968 933 1 36 C 36 97.22 1199 reject_low 23 ALIGNMENT 171 YS2-8g01.p1k vc_3 1267 935 1769 2105 C 333 84.38 1286 reject_low 8 ALIGNMENT 96 YS2-8g01.q1k vc_4 971 1140 126 287 F 170 89.41 1199 reject_low 13 ALIGNMENT 101 YS2-8g01.q1k vc_2 971 1155 2164 2339 F 185 88.65 1199 reject_low 10 ALIGNMENT 171 YS2-8g01.p1k vc_2 1267 935 1769 2105 C 333 84.38 1286 reject_low 7 ALIGNMENT 172 YS2-8g01.p1k vc_4 935 1267 5871 6207 F 333 84.68 1286 reject_low 4 ALIGNMENT 0 YS2-8g01.q1k vc_7 62 933 13525 13524 F 872 0.00 1199 reject_low 20 ALIGNMENT 0 YS2-8g01.q1k vc_4 970 62 5813 5812 C 909 0.00 1199 reject_low 12 ALIGNMENT 0 YS2-8g01.q1k vc_3 62 970 2531 2530 F 909 0.00 1199 reject_low 11 ALIGNMENT 0 YS2-8g01.q1k vc_4 62 930 5831 5830 F 869 0.00 1199 reject_low 14 ALIGNMENT 101 YS2-8g01.q1k vc_3 971 1155 2531 2706 F 185 88.65 1199 reject_low 11 ALIGNMENT 153 YS2-8g04.p1k chr16 27 200 430093 430267 F 174 98.28 883 accept 0 ALIGNMENT 118 YS2-8g07.q1k chr16 40 172 11656 11788 F 133 96.99 210 ambiguous_tel 2 ALIGNMENT 38 YS2-8g07.q1k vc_7 173 210 13525 13562 F 38 100.00 210 reject_low 8 ALIGNMENT 0 YS2-8g07.q1k chr13 210 173 919177 919176 C 38 0.00 210 ambiguous_tel 1 ALIGNMENT 0 YS2-8g07.q1k vc_5 171 62 37 36 C 110 0.00 210 reject_low 9 ALIGNMENT 0 YS2-8g07.q1k vc_4 62 170 5832 5831 F 109 0.00 210 reject_low 6 ALIGNMENT 118 YS2-8g07.q1k chr13 172 40 919176 919308 C 133 96.99 210 ambiguous_tel 1 ALIGNMENT 0 YS2-8g07.q1k chr15 210 173 1079354 1079353 C 38 0.00 210 ambiguous_tel 0 ALIGNMENT 0 YS2-8g07.q1k chr16 173 210 11788 11787 F 38 0.00 210 ambiguous_tel 2 ALIGNMENT 130 YS2-8g07.q1k chr15 172 40 1079353 1079485 C 133 100.00 210 ambiguous_tel 0 ALIGNMENT 40 YS2-8g07.q1k vc_3 210 171 2472 2511 C 40 100.00 210 reject_low 5 ALIGNMENT 0 YS2-8g07.q1k vc_2 170 62 2145 2144 C 109 0.00 210 reject_low 4 ALIGNMENT 40 YS2-8g07.q1k vc_1 210 171 2472 2511 C 40 100.00 210 reject_low 3 ALIGNMENT 36 YS2-8g07.q1k vc_5 207 172 1 36 C 36 100.00 210 reject_low 9 ALIGNMENT 39 YS2-8g07.q1k vc_5 210 172 5025 5063 C 39 100.00 210 reject_low 7 ALIGNMENT 40 YS2-8g07.q1k vc_4 171 210 5832 5871 F 40 100.00 210 reject_low 6 ALIGNMENT 0 YS2-8g07.q1k vc_1 170 62 2512 2511 C 109 0.00 210 reject_low 3 ALIGNMENT 0 YS2-8g07.q1k vc_5 171 62 5064 5063 C 110 0.00 210 reject_low 7 ALIGNMENT 0 YS2-8g07.q1k vc_7 62 172 13525 13524 F 111 0.00 210 reject_low 8 ALIGNMENT 40 YS2-8g07.q1k vc_2 210 171 2105 2144 C 40 100.00 210 reject_low 4 ALIGNMENT 0 YS2-8g07.q1k vc_3 170 62 2512 2511 C 109 0.00 210 reject_low 5 ALIGNMENT 0 YS2-8g08.q1k chr15 329 794 113381 113380 F 466 0.00 1312 accept 0 ALIGNMENT 42 YS2-8g08.q1k chr15 241 328 113294 113381 F 88 85.23 1312 accept 0 ALIGNMENT 0 YS2-8g08.q1k chr15 62 240 113294 113293 F 179 0.00 1312 accept 0 ALIGNMENT 1063 YS2-8g10.p1k chr14 29 1234 34633 35847 F 1206 96.60 1367 accept 0 ALIGNMENT 1029 YS2-8g10.q1k chr14 1294 42 38064 39313 C 1253 95.85 1301 accept 0 ALIGNMENT 59 YS2-8g11.p1k chr16 731 636 868950 869045 C 96 88.54 1387 reject_low 5 ALIGNMENT 0 YS2-8g11.p1k chr16 737 701 869385 869343 C 37 0.00 1387 reject_low 6 ALIGNMENT 0 YS2-8g11.p1k chr16 590 572 869103 869136 C 19 0.00 1387 reject_low 5 ALIGNMENT 0 YS2-8g11.p1k chr16 635 572 869124 869136 C 64 0.00 1387 reject_low 3 ALIGNMENT 21 YS2-8g11.p1k chr16 571 548 869137 869160 C 24 95.83 1387 reject_low 3,5 ALIGNMENT 0 YS2-8g11.p1k chr16 860 732 868951 868950 C 129 0.00 1387 reject_low 5 ALIGNMENT 939 YS2-8g11.p1k chr16 1161 29 868746 869886 C 1133 94.53 1387 accept 0 ALIGNMENT 0 YS2-8g11.p1k chr16 860 779 869345 869344 C 82 0.00 1387 reject_low 6 ALIGNMENT 176 YS2-8g11.p1k chr16 887 636 868950 869201 C 252 90.87 1387 reject_low 1 ALIGNMENT 0 YS2-8g11.p1k chr16 547 62 869161 869160 C 486 0.00 1387 reject_low 3,5 ALIGNMENT 1024 YS2-8g11.q1k chr16 37 1204 865144 866312 F 1168 97.09 1235 accept 0 ALIGNMENT 23 YS2-8g11.p1k chr16 628 591 869065 869102 C 38 86.84 1387 reject_low 5 ALIGNMENT 0 YS2-8g11.p1k chr16 635 629 869046 869064 C 7 0.00 1387 reject_low 5 ALIGNMENT 91 YS2-8g11.p1k chr16 809 636 868950 869123 C 174 85.06 1387 reject_low 3 ALIGNMENT 26 YS2-8g11.p1k chr16 778 738 869344 869384 C 41 87.80 1387 reject_low 6 ALIGNMENT 0 YS2-8g11.p1k chr16 813 62 869387 869386 C 752 0.00 1387 reject_low 4 ALIGNMENT 0 YS2-8g11.p1k chr16 860 810 868951 868950 C 51 0.00 1387 reject_low 3 ALIGNMENT 20 YS2-8g11.p1k chr16 700 660 869344 869384 C 41 82.93 1387 reject_low 2,6 ALIGNMENT 0 YS2-8g11.p1k chr16 635 62 869202 869201 C 574 0.00 1387 reject_low 1 ALIGNMENT 23 YS2-8g11.p1k chr16 854 814 869346 869386 C 41 85.37 1387 reject_low 4 ALIGNMENT 0 YS2-8g11.p1k chr16 713 701 869280 869343 C 13 0.00 1387 reject_low 2 ALIGNMENT 0 YS2-8g11.p1k chr16 659 62 869385 869384 C 598 0.00 1387 reject_low 2,6 ALIGNMENT 154 YS2-8g11.p1k chr16 965 714 869028 869279 C 252 88.10 1387 reject_low 2 ALIGNMENT 0 YS2-8g12.q1k vc_7 62 292 13525 13524 F 231 0.00 330 reject_low 6 ALIGNMENT 38 YS2-8g12.q1k vc_7 293 330 13525 13562 F 38 100.00 330 reject_low 6 ALIGNMENT 41 YS2-8g12.q1k vc_4 290 330 5831 5871 F 41 100.00 330 reject_low 4 ALIGNMENT 0 YS2-8g12.q1k chr04 290 330 1057040 1057039 F 41 0.00 330 accept_chi 1 ALIGNMENT 41 YS2-8g12.q1k vc_1 330 290 2472 2512 C 41 100.00 330 reject_low 2 ALIGNMENT 259 YS2-8g12.q1k chr04 30 289 1056781 1057040 F 260 100.00 330 accept_chi 1 ALIGNMENT 259 YS2-8g12.p1k chr04 287 28 1056781 1057040 C 260 100.00 305 accept_chi 0 ALIGNMENT 37 YS2-8g12.q1k vc_5 327 288 1 40 C 40 97.50 330 reject_low 7 ALIGNMENT 0 YS2-8g12.q1k vc_5 287 62 5068 5067 C 226 0.00 330 reject_low 5 ALIGNMENT 0 YS2-8g12.q1k vc_4 62 289 5831 5830 F 228 0.00 330 reject_low 4 ALIGNMENT 0 YS2-8g12.q1k vc_1 289 62 2513 2512 C 228 0.00 330 reject_low 2 ALIGNMENT 40 YS2-8g12.q1k vc_5 330 288 5025 5067 C 43 97.67 330 reject_low 5 ALIGNMENT 41 YS2-8g12.q1k vc_3 330 290 2472 2512 C 41 100.00 330 reject_low 3 ALIGNMENT 0 YS2-8g12.q1k vc_3 289 62 2513 2512 C 228 0.00 330 reject_low 3 ALIGNMENT 0 YS2-8g12.p1k chr04 305 288 1056782 1056781 C 18 0.00 305 accept_chi 0 ALIGNMENT 0 YS2-8g12.q1k vc_5 287 62 41 40 C 226 0.00 330 reject_low 7 ALIGNMENT 164 YS2-8g14.p1k chr05 486 231 378527 378779 C 256 89.45 1077 accept 0 ALIGNMENT 939 YS2-8g14.q1k chr05 40 1132 374228 375325 F 1093 96.16 1244 accept 0 ALIGNMENT 206 YS2-8g16.q1k vc_3 863 1172 2531 2845 F 310 89.35 1265 reject_low 11 ALIGNMENT 0 YS2-8g16.p1k vc_7 62 842 13562 13561 F 781 0.00 1360 reject_low 7 ALIGNMENT 262 YS2-8g16.p1k vc_2 1259 843 1675 2105 C 417 87.53 1360 reject_low 5 ALIGNMENT 262 YS2-8g16.p1k vc_7 843 1259 13562 13992 F 417 87.53 1360 reject_low 7 ALIGNMENT 0 YS2-8g16.p1k vc_1 909 874 2442 2441 C 36 0.00 1360 reject_low 25 ALIGNMENT 262 YS2-8g16.p1k vc_7 843 1259 100 530 F 417 87.53 1360 reject_low 3 ALIGNMENT 0 YS2-8g16.q1k vc_7 1073 1074 5172 6360 C 0 0.00 1265 reject_low 23 ALIGNMENT 262 YS2-8g16.p1k vc_1 1259 843 1675 2105 C 417 87.53 1360 reject_low 4 ALIGNMENT 0 YS2-8g16.q1k vc_4 62 822 5831 5830 F 761 0.00 1265 reject_low 15 ALIGNMENT 199 YS2-8g16.q1k vc_4 1172 863 5496 5812 C 310 89.03 1265 reject_low 12 ALIGNMENT 0 YS2-8g16.q1k vc_5 824 62 37 36 C 763 0.00 1265 reject_low 24 ALIGNMENT 206 YS2-8g16.q1k vc_7 1172 863 2413 2727 C 310 89.68 1265 reject_low 3 ALIGNMENT 41 YS2-8g16.q1k vc_4 823 863 5831 5871 F 41 100.00 1265 reject_low 15 ALIGNMENT 0 YS2-8g16.q1k vc_7 864 890 13562 13561 F 27 0.00 1265 reject_low 22 ALIGNMENT 0 YS2-8g16.q1k vc_7 62 825 13525 13524 F 764 0.00 1265 reject_low 22 ALIGNMENT 0 YS2-8g16.q1k vc_5 62 862 2398 2397 F 801 0.00 1265 reject_low 2 ALIGNMENT 206 YS2-8g16.q1k vc_5 863 1172 2398 2712 F 310 89.35 1265 reject_low 2 ALIGNMENT 0 YS2-8g16.q1k vc_7 1023 62 6412 6411 C 962 0.00 1265 reject_low 23 ALIGNMENT 0 YS2-8g16.p1k vc_3 842 62 2473 2472 C 781 0.00 1360 reject_low 26 ALIGNMENT 0 YS2-8g16.p1k chr13 909 825 341861 341860 C 85 0.00 1360 accept_chi 0 ALIGNMENT 206 YS2-8g16.q1k vc_2 863 1172 2164 2478 F 310 89.35 1265 reject_low 10 ALIGNMENT 0 YS2-8g16.q1k vc_2 890 864 2106 2105 C 27 0.00 1265 reject_low 18 ALIGNMENT 0 YS2-8g16.q1k vc_2 62 862 2164 2163 F 801 0.00 1265 reject_low 10 ALIGNMENT 0 YS2-8g16.p1k vc_6 62 1069 3585 3584 F 1008 0.00 1360 reject_low 14 ALIGNMENT 0 YS2-8g16.p1k vc_5 842 62 5026 5025 C 781 0.00 1360 reject_low 2 ALIGNMENT 26 YS2-8g16.p1k vc_1 873 843 2441 2472 C 31 96.77 1360 reject_low 25 ALIGNMENT 0 YS2-8g16.p1k vc_3 842 62 2106 2105 C 781 0.00 1360 reject_low 6 ALIGNMENT 26 YS2-8g16.p1k vc_3 873 843 2441 2472 C 31 96.77 1360 reject_low 26 ALIGNMENT 0 YS2-8g16.p1k vc_1 842 62 2106 2105 C 781 0.00 1360 reject_low 4 ALIGNMENT 41 YS2-8g16.q1k vc_1 863 823 2472 2512 C 41 100.00 1265 reject_low 17 ALIGNMENT 0 YS2-8g16.q1k vc_5 890 864 5026 5025 C 27 0.00 1265 reject_low 20 ALIGNMENT 0 YS2-8g16.q1k vc_1 62 862 2531 2530 F 801 0.00 1265 reject_low 9 ALIGNMENT 0 YS2-8g16.q1k vc_5 890 861 2 1 C 30 0.00 1265 reject_low 24 ALIGNMENT 0 YS2-8g16.p1k vc_7 62 842 100 99 F 781 0.00 1360 reject_low 3 ALIGNMENT 0 YS2-8g16.q1k vc_1 822 62 2513 2512 C 761 0.00 1265 reject_low 17 ALIGNMENT 0 YS2-8g16.q1k vc_3 822 62 2513 2512 C 761 0.00 1265 reject_low 19 ALIGNMENT 36 YS2-8g16.q1k vc_5 860 825 1 36 C 36 100.00 1265 reject_low 24 ALIGNMENT 0 YS2-8g16.q1k vc_2 822 62 2146 2145 C 761 0.00 1265 reject_low 18 ALIGNMENT 0 YS2-8g16.p1k vc_1 842 62 2473 2472 C 781 0.00 1360 reject_low 25 ALIGNMENT 45 YS2-8g16.q1k vc_7 1074 1024 6360 6411 C 51 96.08 1265|1,0 reject_low 23 ALIGNMENT 764 YS2-8g16.q1k chr13 30 823 341861 342656 F 794 99.50 1265 accept_chi 1 ALIGNMENT 0 YS2-8g16.p1k vc_3 909 874 2442 2441 C 36 0.00 1360 reject_low 26 ALIGNMENT 0 YS2-8g16.q1k vc_4 862 62 1535 1534 C 801 0.00 1265 reject_low 16 ALIGNMENT 38 YS2-8g16.q1k vc_7 826 863 13525 13562 F 38 100.00 1265 reject_low 22 ALIGNMENT 206 YS2-8g16.q1k vc_1 863 1172 2531 2845 F 310 89.35 1265 reject_low 9 ALIGNMENT 0 YS2-8g16.q1k vc_7 62 825 63 62 F 764 0.00 1265 reject_low 21 ALIGNMENT 262 YS2-8g16.p1k vc_5 1259 843 4595 5025 C 417 87.53 1360 reject_low 2 ALIGNMENT 0 YS2-8g16.q1k vc_5 824 62 5064 5063 C 763 0.00 1265 reject_low 20 ALIGNMENT 41 YS2-8g16.q1k vc_2 863 823 2105 2145 C 41 100.00 1265 reject_low 18 ALIGNMENT 0 YS2-8g16.p1k vc_4 62 842 5871 5870 F 781 0.00 1360 reject_low 8 ALIGNMENT 39 YS2-8g16.q1k vc_5 863 825 5025 5063 C 39 100.00 1265 reject_low 20 ALIGNMENT 117 YS2-8g16.q1k vc_4 863 1025 126 287 F 163 91.41 1265 reject_low 13 ALIGNMENT 44 YS2-8g16.q1k vc_7 1172 1073 5068 5172 C 100 82.00 1265|0,1 reject_low 23 ALIGNMENT 0 YS2-8g16.p1k vc_2 842 62 2106 2105 C 781 0.00 1360 reject_low 5 ALIGNMENT 0 YS2-8g16.q1k chr13 824 890 342656 342655 F 67 0.00 1265 accept_chi 1 ALIGNMENT 254 YS2-8g16.p1k vc_4 843 1189 5871 6221 F 347 89.91 1360 reject_low 8 ALIGNMENT 775 YS2-8g16.p1k chr13 824 28 341860 342656 C 797 99.75 1360 accept_chi 0 ALIGNMENT 63 YS2-8g16.q1k vc_4 944 863 1453 1534 C 82 95.12 1265 reject_low 16 ALIGNMENT 0 YS2-8g16.q1k vc_3 890 864 2473 2472 C 27 0.00 1265 reject_low 19 ALIGNMENT 0 YS2-8g16.q1k vc_7 864 890 100 99 F 27 0.00 1265 reject_low 21 ALIGNMENT 41 YS2-8g16.q1k vc_3 863 823 2472 2512 C 41 100.00 1265 reject_low 19 ALIGNMENT 0 YS2-8g16.q1k vc_4 862 62 5813 5812 C 801 0.00 1265 reject_low 12 ALIGNMENT 38 YS2-8g16.q1k vc_7 826 863 63 100 F 38 100.00 1265 reject_low 21 ALIGNMENT 262 YS2-8g16.p1k vc_3 1259 843 1675 2105 C 417 87.53 1360 reject_low 6 ALIGNMENT 0 YS2-8g16.q1k vc_4 62 862 126 125 F 801 0.00 1265 reject_low 13 ALIGNMENT 0 YS2-8g16.q1k vc_7 862 62 2728 2727 C 801 0.00 1265 reject_low 3 ALIGNMENT 0 YS2-8g16.q1k vc_1 890 864 2473 2472 C 27 0.00 1265 reject_low 17 ALIGNMENT 0 YS2-8g16.q1k vc_4 864 863 5872 6353 F 0 0.00 1265 reject_low 15 ALIGNMENT 0 YS2-8g16.q1k vc_3 62 862 2531 2530 F 801 0.00 1265 reject_low 11 ALIGNMENT 117 YS2-8g16.q1k vc_4 863 1025 6353 6514 F 163 91.41 1265|1,0 reject_low 15 ALIGNMENT 83 YS2-8g16.p1k vc_6 1070 1259 3585 3786 F 190 82.63 1360 reject_low 14 ALIGNMENT 0 YS2-8g17.q1k vc_1 257 62 2513 2512 C 196 0.00 298 reject_low 2 ALIGNMENT 199 YS2-8g17.q1k chr09 32 257 153398 153622 F 226 98.23 298 accept_chi 1 ALIGNMENT 41 YS2-8g17.q1k vc_1 298 258 2472 2512 C 41 100.00 298 reject_low 2 ALIGNMENT 41 YS2-8g17.q1k vc_3 298 258 2472 2512 C 41 100.00 298 reject_low 3 ALIGNMENT 0 YS2-8g17.q1k vc_7 62 260 13525 13524 F 199 0.00 298 reject_low 5 ALIGNMENT 0 YS2-8g17.q1k vc_3 257 62 2513 2512 C 196 0.00 298 reject_low 3 ALIGNMENT 203 YS2-8g17.p1k chr09 272 38 153388 153622 C 235 97.02 284 accept_chi 0 ALIGNMENT 41 YS2-8g17.q1k vc_4 258 298 5831 5871 F 41 100.00 298 reject_low 4 ALIGNMENT 38 YS2-8g17.q1k vc_7 261 298 13525 13562 F 38 100.00 298 reject_low 5 ALIGNMENT 0 YS2-8g17.q1k chr09 258 298 153622 153621 F 41 0.00 298 accept_chi 1 ALIGNMENT 0 YS2-8g17.q1k vc_4 62 257 5831 5830 F 196 0.00 298 reject_low 4 ALIGNMENT 940 YS2-8g18.q1k chr13 1148 36 275864 276990 C 1113 95.69 1197 accept 0 ALIGNMENT 881 YS2-8g19.p1k chr01 36 1105 5103 6170 F 1070 94.86 1168 accept 0 ALIGNMENT 926 YS2-8g19.q1k chr01 1150 36 9564 10677 C 1115 95.78 1221 accept 0 ALIGNMENT 0 YS2-8g21.q1k vc_4 62 638 5832 5831 F 577 0.00 678 reject_low 4 ALIGNMENT 548 YS2-8g21.p1k chr04 38 625 554051 554639 F 588 98.81 644 accept_chi 1 ALIGNMENT 39 YS2-8g21.q1k vc_5 678 640 5025 5063 C 39 100.00 678 reject_low 5 ALIGNMENT 0 YS2-8g21.q1k vc_3 638 62 2512 2511 C 577 0.00 678 reject_low 3 ALIGNMENT 0 YS2-8g21.q1k vc_5 639 62 5064 5063 C 578 0.00 678 reject_low 5 ALIGNMENT 0 YS2-8g21.q1k vc_1 638 62 2512 2511 C 577 0.00 678 reject_low 2 ALIGNMENT 0 YS2-8g21.q1k vc_5 639 62 37 36 C 578 0.00 678 reject_low 7 ALIGNMENT 40 YS2-8g21.q1k vc_1 678 639 2472 2511 C 40 100.00 678 reject_low 2 ALIGNMENT 0 YS2-8g21.q1k vc_7 62 640 13525 13524 F 579 0.00 678 reject_low 6 ALIGNMENT 40 YS2-8g21.q1k vc_4 639 678 5832 5871 F 40 100.00 678 reject_low 4 ALIGNMENT 38 YS2-8g21.q1k vc_7 641 678 13525 13562 F 38 100.00 678 reject_low 6 ALIGNMENT 581 YS2-8g21.q1k chr04 638 34 554030 554634 C 605 99.67 678 accept_chi 0 ALIGNMENT 36 YS2-8g21.q1k vc_5 675 640 1 36 C 36 100.00 678 reject_low 7 ALIGNMENT 40 YS2-8g21.q1k vc_3 678 639 2472 2511 C 40 100.00 678 reject_low 3 ALIGNMENT 0 YS2-8g21.q1k chr04 678 639 554031 554030 C 40 0.00 678 accept_chi 0 ALIGNMENT 0 YS2-8g21.p1k chr04 626 644 554639 554638 F 19 0.00 644 accept_chi 1 ALIGNMENT 0 YS2-8g22.p1k chr03 328 346 255721 255720 F 19 0.00 346 accept_chi 1 ALIGNMENT 41 YS2-8g22.q1k vc_1 373 333 2472 2512 C 41 100.00 373 reject_low 2 ALIGNMENT 38 YS2-8g22.q1k vc_7 336 373 13525 13562 F 38 100.00 373 reject_low 7 ALIGNMENT 0 YS2-8g22.q1k vc_5 334 62 5064 5063 C 273 0.00 373 reject_low 6 ALIGNMENT 39 YS2-8g22.q1k vc_5 373 335 5025 5063 C 39 100.00 373 reject_low 6 ALIGNMENT 0 YS2-8g22.q1k vc_2 332 62 2146 2145 C 271 0.00 373 reject_low 3 ALIGNMENT 278 YS2-8g22.q1k chr03 332 35 255423 255720 C 298 100.00 373 accept_chi 0 ALIGNMENT 41 YS2-8g22.q1k vc_3 373 333 2472 2512 C 41 100.00 373 reject_low 4 ALIGNMENT 0 YS2-8g22.q1k vc_4 62 332 5831 5830 F 271 0.00 373 reject_low 5 ALIGNMENT 0 YS2-8g22.q1k vc_3 332 62 2513 2512 C 271 0.00 373 reject_low 4 ALIGNMENT 0 YS2-8g22.q1k vc_5 334 62 37 36 C 273 0.00 373 reject_low 8 ALIGNMENT 0 YS2-8g22.q1k chr03 373 333 255424 255423 C 41 0.00 373 accept_chi 0 ALIGNMENT 0 YS2-8g22.q1k vc_1 332 62 2513 2512 C 271 0.00 373 reject_low 2 ALIGNMENT 41 YS2-8g22.q1k vc_2 373 333 2105 2145 C 41 100.00 373 reject_low 3 ALIGNMENT 36 YS2-8g22.q1k vc_5 370 335 1 36 C 36 100.00 373 reject_low 8 ALIGNMENT 0 YS2-8g22.q1k vc_7 62 335 13525 13524 F 274 0.00 373 reject_low 7 ALIGNMENT 41 YS2-8g22.q1k vc_4 333 373 5831 5871 F 41 100.00 373 reject_low 5 ALIGNMENT 276 YS2-8g22.p1k chr03 29 327 255423 255721 F 299 99.67 346 accept_chi 1 ALIGNMENT 0 YS2-8g23.q1k vc_5 428 62 5064 5063 C 367 0.00 467 reject_low 9 ALIGNMENT 41 YS2-8g23.q1k vc_2 467 427 2105 2145 C 41 100.00 467 reject_low 6 ALIGNMENT 41 YS2-8g23.q1k vc_4 427 467 5831 5871 F 41 100.00 467 reject_low 8 ALIGNMENT 0 YS2-8g23.q1k chr12 427 467 468666 468665 F 41 0.00 467 reject_low 1 ALIGNMENT 0 YS2-8g23.q1k vc_7 62 429 13525 13524 F 368 0.00 467 reject_low 10 ALIGNMENT 0 YS2-8g23.p1k chr06 253 437 31729 31728 F 185 0.00 437 reject_low 3 ALIGNMENT 41 YS2-8g23.q1k vc_1 467 427 2472 2512 C 41 100.00 467 reject_low 5 ALIGNMENT 94 YS2-8g23.q1k chr06 312 205 31622 31729 C 108 98.15 467 reject_low 4 ALIGNMENT 0 YS2-8g23.q1k vc_5 428 62 37 36 C 367 0.00 467 reject_low 11 ALIGNMENT 358 YS2-8g23.q1k chr12 38 426 459140 459529 F 389 99.23 467 accept 0 ALIGNMENT 0 YS2-8g23.q1k chr06 467 313 31623 31622 C 155 0.00 467 reject_low 4 ALIGNMENT 0 YS2-8g23.q1k chr06 204 62 31730 31729 C 143 0.00 467 reject_low 4 ALIGNMENT 0 YS2-8g23.p1k chr12 437 421 459141 459140 C 17 0.00 437 reject_low 2 ALIGNMENT 0 YS2-8g23.q1k chr12 427 467 459529 459528 F 41 0.00 467 accept 0 ALIGNMENT 38 YS2-8g23.q1k vc_7 430 467 13525 13562 F 38 100.00 467 reject_low 10 ALIGNMENT 358 YS2-8g23.q1k chr12 38 426 468277 468666 F 389 99.23 467 reject_low 1 ALIGNMENT 355 YS2-8g23.p1k chr12 420 31 468277 468666 C 390 98.72 437 accept 0 ALIGNMENT 36 YS2-8g23.q1k vc_5 464 429 1 36 C 36 100.00 467 reject_low 11 ALIGNMENT 41 YS2-8g23.q1k vc_3 467 427 2472 2512 C 41 100.00 467 reject_low 7 ALIGNMENT 0 YS2-8g23.q1k vc_1 426 62 2513 2512 C 365 0.00 467 reject_low 5 ALIGNMENT 355 YS2-8g23.p1k chr12 420 31 459140 459529 C 390 98.72 437 reject_low 2 ALIGNMENT 0 YS2-8g23.q1k vc_4 62 426 5831 5830 F 365 0.00 467 reject_low 8 ALIGNMENT 0 YS2-8g23.q1k vc_2 426 62 2146 2145 C 365 0.00 467 reject_low 6 ALIGNMENT 39 YS2-8g23.q1k vc_5 467 429 5025 5063 C 39 100.00 467 reject_low 9 ALIGNMENT 0 YS2-8g23.p1k chr06 62 144 31622 31621 F 83 0.00 437 reject_low 3 ALIGNMENT 94 YS2-8g23.p1k chr06 145 252 31622 31729 F 108 98.15 437 reject_low 3 ALIGNMENT 0 YS2-8g23.p1k chr12 437 421 468278 468277 C 17 0.00 437 accept 0 ALIGNMENT 0 YS2-8g23.q1k vc_3 426 62 2513 2512 C 365 0.00 467 reject_low 7 ALIGNMENT 0 YS2-8g24.p1k vc_1 844 62 2106 2105 C 783 0.00 1215 reject_low 2 ALIGNMENT 0 YS2-8g24.p1k vc_3 844 62 2473 2472 C 783 0.00 1215 reject_low 10 ALIGNMENT 0 YS2-8g24.p1k vc_3 844 62 2106 2105 C 783 0.00 1215 reject_low 4 ALIGNMENT 170 YS2-8g24.p1k vc_7 845 1176 100 438 F 332 85.24 1215 reject_low 7 ALIGNMENT 170 YS2-8g24.p1k vc_7 845 1176 13562 13900 F 332 85.24 1215 reject_low 8 ALIGNMENT 0 YS2-8g24.p1k vc_4 62 844 5871 5870 F 783 0.00 1215 reject_low 5 ALIGNMENT 0 YS2-8g24.p1k vc_7 62 844 13562 13561 F 783 0.00 1215 reject_low 8 ALIGNMENT 26 YS2-8g24.p1k vc_1 875 845 2441 2472 C 31 96.77 1215 reject_low 9 ALIGNMENT 0 YS2-8g24.p1k vc_7 62 844 100 99 F 783 0.00 1215 reject_low 7 ALIGNMENT 780 YS2-8g24.p1k chr09 37 826 186785 187574 F 790 100.00 1215 accept_chi 1 ALIGNMENT 170 YS2-8g24.p1k vc_3 1176 845 1767 2105 C 332 85.24 1215 reject_low 4 ALIGNMENT 170 YS2-8g24.p1k vc_2 1176 845 1767 2105 C 332 85.24 1215 reject_low 3 ALIGNMENT 0 YS2-8g24.p1k vc_5 844 62 5026 5025 C 783 0.00 1215 reject_low 6 ALIGNMENT 0 YS2-8g24.p1k vc_2 844 62 2106 2105 C 783 0.00 1215 reject_low 3 ALIGNMENT 0 YS2-8g24.p1k vc_1 908 876 2442 2441 C 33 0.00 1215 reject_low 9 ALIGNMENT 0 YS2-8g24.p1k vc_3 908 876 2442 2441 C 33 0.00 1215 reject_low 10 ALIGNMENT 26 YS2-8g24.p1k vc_3 875 845 2441 2472 C 31 96.77 1215 reject_low 10 ALIGNMENT 170 YS2-8g24.p1k vc_4 845 1176 5871 6209 F 332 85.24 1215 reject_low 5 ALIGNMENT 780 YS2-8g24.q1k chr09 837 42 186778 187572 C 796 99.75 838 accept_chi 0 ALIGNMENT 0 YS2-8g24.p1k chr09 827 908 187574 187573 F 82 0.00 1215 accept_chi 1 ALIGNMENT 170 YS2-8g24.p1k vc_5 1176 845 4687 5025 C 332 85.24 1215 reject_low 6 ALIGNMENT 0 YS2-8g24.p1k vc_1 844 62 2473 2472 C 783 0.00 1215 reject_low 9 ALIGNMENT 170 YS2-8g24.p1k vc_1 1176 845 1767 2105 C 332 85.24 1215 reject_low 2 ALIGNMENT 911 YS2-8h01.q1k chr05 41 1091 174366 175429 F 1051 96.38 1177 accept 0 ALIGNMENT 0 YS2-8h05.q1k vc_5 397 62 5064 5063 C 336 0.00 436 reject_low 6 ALIGNMENT 0 YS2-8h05.p1k chr02 402 384 728748 728747 C 19 0.00 402 accept_chi 1 ALIGNMENT 41 YS2-8h05.q1k vc_2 436 396 2105 2145 C 41 100.00 436 reject_low 3 ALIGNMENT 0 YS2-8h05.q1k vc_3 395 62 2513 2512 C 334 0.00 436 reject_low 4 ALIGNMENT 41 YS2-8h05.q1k vc_1 436 396 2472 2512 C 41 100.00 436 reject_low 2 ALIGNMENT 336 YS2-8h05.p1k chr02 383 29 728747 729102 C 355 99.44 402 accept_chi 1 ALIGNMENT 344 YS2-8h05.q1k chr02 40 395 728747 729102 F 356 100.00 436 accept_chi 0 ALIGNMENT 36 YS2-8h05.q1k vc_5 433 398 1 36 C 36 100.00 436 reject_low 8 ALIGNMENT 0 YS2-8h05.q1k vc_5 397 62 37 36 C 336 0.00 436 reject_low 8 ALIGNMENT 0 YS2-8h05.q1k vc_1 395 62 2513 2512 C 334 0.00 436 reject_low 2 ALIGNMENT 0 YS2-8h05.q1k vc_7 62 398 13525 13524 F 337 0.00 436 reject_low 7 ALIGNMENT 41 YS2-8h05.q1k vc_4 396 436 5831 5871 F 41 100.00 436 reject_low 5 ALIGNMENT 39 YS2-8h05.q1k vc_5 436 398 5025 5063 C 39 100.00 436 reject_low 6 ALIGNMENT 38 YS2-8h05.q1k vc_7 399 436 13525 13562 F 38 100.00 436 reject_low 7 ALIGNMENT 0 YS2-8h05.q1k vc_2 395 62 2146 2145 C 334 0.00 436 reject_low 3 ALIGNMENT 0 YS2-8h05.q1k chr02 396 436 729102 729101 F 41 0.00 436 accept_chi 0 ALIGNMENT 41 YS2-8h05.q1k vc_3 436 396 2472 2512 C 41 100.00 436 reject_low 4 ALIGNMENT 0 YS2-8h05.q1k vc_4 62 395 5831 5830 F 334 0.00 436 reject_low 5 ALIGNMENT 780 YS2-8h06.p1k chr16 941 29 88659 89587 C 913 96.39 1220 accept 0 ALIGNMENT 969 YS2-8h06.q1k chr16 39 1149 85766 86873 F 1111 96.22 1255 accept 0 ALIGNMENT 1011 YS2-8h07.p1k chr04 1183 34 99554 100713 C 1150 96.61 1425 accept 0 ALIGNMENT 1032 YS2-8h07.q1k chr04 39 1206 98336 99506 F 1168 96.92 1307 accept 0 ALIGNMENT 1005 YS2-8h08.q1k chr15 1366 95 538145 539405 C 1272 94.42 1366 accept 0 ALIGNMENT 914 YS2-8h08.p1k chr15 31 1144 535213 536336 F 1114 93.72 1432 accept 0 ALIGNMENT 584 YS2-8h09.q1k chr07 48 725 442964 443637 F 678 96.76 1267 accept 0 ALIGNMENT 902 YS2-8h09.p1k chr07 1061 32 446540 447577 C 1030 96.02 1142 accept 0 ALIGNMENT 41 YS2-8h11.q1k vc_1 331 291 2472 2512 C 41 100.00 331 reject_low 2 ALIGNMENT 0 YS2-8h11.q1k vc_5 292 62 5064 5063 C 231 0.00 331 reject_low 6 ALIGNMENT 39 YS2-8h11.q1k vc_5 331 293 5025 5063 C 39 100.00 331 reject_low 6 ALIGNMENT 0 YS2-8h11.q1k vc_7 62 293 13525 13524 F 232 0.00 331 reject_low 7 ALIGNMENT 41 YS2-8h11.q1k vc_4 291 331 5831 5871 F 41 100.00 331 reject_low 5 ALIGNMENT 38 YS2-8h11.q1k vc_7 294 331 13525 13562 F 38 100.00 331 reject_low 7 ALIGNMENT 36 YS2-8h11.q1k vc_5 328 293 1 36 C 36 100.00 331 reject_low 8 ALIGNMENT 235 YS2-8h11.p1k chr12 27 278 303657 303908 F 252 99.60 296 accept_chi 0 ALIGNMENT 0 YS2-8h11.q1k vc_5 292 62 37 36 C 231 0.00 331 reject_low 8 ALIGNMENT 41 YS2-8h11.q1k vc_3 331 291 2472 2512 C 41 100.00 331 reject_low 4 ALIGNMENT 0 YS2-8h11.q1k vc_1 290 62 2513 2512 C 229 0.00 331 reject_low 2 ALIGNMENT 0 YS2-8h11.q1k vc_4 62 290 5831 5830 F 229 0.00 331 reject_low 5 ALIGNMENT 0 YS2-8h11.p1k chr12 279 296 303908 303907 F 18 0.00 296 accept_chi 0 ALIGNMENT 0 YS2-8h11.q1k chr12 331 291 303658 303657 C 41 0.00 331 accept_chi 1 ALIGNMENT 235 YS2-8h11.q1k chr12 290 39 303657 303908 C 252 99.60 331 accept_chi 1 ALIGNMENT 41 YS2-8h11.q1k vc_2 331 291 2105 2145 C 41 100.00 331 reject_low 3 ALIGNMENT 0 YS2-8h11.q1k vc_2 290 62 2146 2145 C 229 0.00 331 reject_low 3 ALIGNMENT 0 YS2-8h11.q1k vc_3 290 62 2513 2512 C 229 0.00 331 reject_low 4 ALIGNMENT 215 YS2-8h12.q1k chr14 514 279 561743 561978 C 236 98.73 514 reject_low 15 ALIGNMENT 215 YS2-8h12.p1k vc_7 1 326 456 787 F 326 87.42 546 reject_vc 6 ALIGNMENT 0 YS2-8h12.q1k chr04 277 62 437517 437516 C 216 0.00 514 reject_low 22 ALIGNMENT 0 YS2-8h12.q1k chr07 62 277 931173 931172 F 216 0.00 514 reject_low 23 ALIGNMENT 212 YS2-8h12.q1k chr16 279 514 436887 437122 F 236 98.31 514 reject_low 18 ALIGNMENT 218 YS2-8h12.q1k chr08 514 279 85670 85905 C 236 99.15 514 reject_low 13 ALIGNMENT 224 YS2-8h12.q1k chr10 514 279 203454 203689 C 236 100.00 514 reject_low 11 ALIGNMENT 0 YS2-8h12.q1k chr05 62 278 354356 354355 F 217 0.00 514 reject_low 21 ALIGNMENT 0 YS2-8h12.q1k chr15 361 362 704061 710026 C 0 0.00 514 reject_low 25 ALIGNMENT 203 YS2-8h12.q1k chr05 279 514 354356 354591 F 236 97.03 514 reject_low 21 ALIGNMENT 0 YS2-8h12.q1k chr14 278 62 561979 561978 C 217 0.00 514 reject_low 15 ALIGNMENT 206 YS2-8h12.q1k chr14 279 514 632121 632356 F 236 97.46 514 reject_low 20 ALIGNMENT 0 YS2-8h12.q1k chr14 62 278 632121 632120 F 217 0.00 514 reject_low 20 ALIGNMENT 141 YS2-8h12.q1k chr15 514 359 703908 704063 C 156 98.08 514|0,3 reject_low 25 ALIGNMENT 221 YS2-8h12.p1k vc_3 340 1 1402 1749 C 340 87.35 546 reject_vc 3 ALIGNMENT 212 YS2-8h12.q1k chr16 279 514 442739 442974 F 236 98.31 514 reject_low 19 ALIGNMENT 0 YS2-8h12.q1k chr08 278 62 91758 91757 C 217 0.00 514 reject_low 17 ALIGNMENT 0 YS2-8h12.q1k chr02 62 278 35848 35847 F 217 0.00 514 reject_low 9 ALIGNMENT 0 YS2-8h12.q1k chr02 62 278 643483 643482 F 217 0.00 514 reject_low 16 ALIGNMENT 215 YS2-8h12.q1k chr07 514 279 110994 111229 C 236 98.73 514 reject_low 14 ALIGNMENT 212 YS2-8h12.q1k chr02 279 514 643483 643718 F 236 98.31 514 reject_low 16 ALIGNMENT 221 YS2-8h12.p1k vc_6 1 326 3712 4043 F 326 88.04 546 reject_vc 5 ALIGNMENT 0 YS2-8h12.q1k chr13 278 62 504141 504140 C 217 0.00 514 reject_low 12 ALIGNMENT 186 YS2-8h12.q1k chr07 278 511 931173 931405 F 234 95.30 514 reject_low 23 ALIGNMENT 224 YS2-8h12.q1k chr10 514 279 197599 197834 C 236 100.00 514 reject_low 10 ALIGNMENT 57 YS2-8h12.q1k chr15 363 279 710025 710108 C 85 94.12 514|2,0 reject_low 25 ALIGNMENT 0 YS2-8h12.q1k chr13 62 270 808527 808526 F 209 0.00 514 reject_low 8 ALIGNMENT 224 YS2-8h12.q1k chr02 279 514 35848 36083 F 236 100.00 514 reject_low 9 ALIGNMENT 0 YS2-8h12.q1k chr15 278 62 710109 710108 C 217 0.00 514 reject_low 25 ALIGNMENT 447 YS2-8h12.q1k chr09 37 514 196408 196885 F 478 100.00 514 accept 0 ALIGNMENT 46 YS2-8h12.q1k chr06 473 280 144325 144518 C 194 77.84 514 reject_low 24 ALIGNMENT 0 YS2-8h12.q1k chr07 278 62 111230 111229 C 217 0.00 514 reject_low 14 ALIGNMENT 0 YS2-8h12.q1k chr08 278 62 85906 85905 C 217 0.00 514 reject_low 13 ALIGNMENT 221 YS2-8h12.p1k vc_2 340 1 1402 1749 C 340 87.35 546 reject_vc 2 ALIGNMENT 0 YS2-8h12.q1k chr16 62 278 436887 436886 F 217 0.00 514 reject_low 18 ALIGNMENT 224 YS2-8h12.q1k chr13 514 279 503905 504140 C 236 100.00 514 reject_low 12 ALIGNMENT 215 YS2-8h12.p1k vc_7 1 326 13918 14249 F 326 87.42 546 reject_vc 7 ALIGNMENT 190 YS2-8h12.q1k chr04 514 278 437281 437516 C 237 95.36 514 reject_low 22 ALIGNMENT 0 YS2-8h12.q1k chr16 62 278 442739 442738 F 217 0.00 514 reject_low 19 ALIGNMENT 0 YS2-8h12.q1k chr10 278 62 197835 197834 C 217 0.00 514 reject_low 10 ALIGNMENT 0 YS2-8h12.q1k chr10 278 62 203690 203689 C 217 0.00 514 reject_low 11 ALIGNMENT 204 YS2-8h12.q1k chr13 271 514 808527 808770 F 244 96.72 514 reject_low 8 ALIGNMENT 0 YS2-8h12.q1k chr06 279 62 144519 144518 C 218 0.00 514 reject_low 24 ALIGNMENT 212 YS2-8h12.q1k chr08 514 279 91522 91757 C 236 98.31 514 reject_low 17 ALIGNMENT 221 YS2-8h12.p1k vc_1 340 1 1402 1749 C 340 87.35 546 reject_vc 1 ALIGNMENT 221 YS2-8h12.p1k vc_5 340 1 4322 4669 C 340 87.35 546 reject_vc 4 ALIGNMENT 0 YS2-8h12.q1k chr06 514 474 144326 144325 C 41 0.00 514 reject_low 24 ALIGNMENT 945 YS2-8h13.q1k chr04 39 1115 346593 347682 F 1077 96.94 1204 accept 0 ALIGNMENT 816 YS2-8h13.p1k chr04 1086 30 350467 351514 C 1057 93.85 1233 accept 0 ALIGNMENT 162 YS2-8h14.p1k chr14 218 28 8869 9058 C 191 96.34 236 ambiguous_tel 3 ALIGNMENT 0 YS2-8h14.p1k chr06 236 219 6966 6965 C 18 0.00 236 ambiguous_tel 2 ALIGNMENT 171 YS2-8h14.p1k chr02 28 218 810745 810934 F 191 97.91 236 ambiguous_tel 0 ALIGNMENT 0 YS2-8h14.p1k chr10 219 236 743375 743374 F 18 0.00 236 reject_low 6 ALIGNMENT 0 YS2-8h14.p1k chr13 236 219 7784 7783 C 18 0.00 236 ambiguous_tel 1 ALIGNMENT 0 YS2-8h14.p1k chr04 236 219 2342 2341 C 18 0.00 236 reject_low 7 ALIGNMENT 0 YS2-8h14.p1k chr14 236 219 8870 8869 C 18 0.00 236 ambiguous_tel 3 ALIGNMENT 109 YS2-8h14.p1k chr10 48 218 743206 743375 F 171 88.89 236 reject_low 6 ALIGNMENT 0 YS2-8h14.p1k chr09 217 236 437635 437634 F 20 0.00 236 reject_low 5 ALIGNMENT 0 YS2-8h14.p1k chr02 219 236 810934 810933 F 18 0.00 236 ambiguous_tel 0 ALIGNMENT 76 YS2-8h14.p1k chr04 218 48 2341 2510 C 171 82.46 236 reject_low 7 ALIGNMENT 171 YS2-8h14.p1k chr13 218 28 7783 7972 C 191 97.91 236 ambiguous_tel 1 ALIGNMENT 126 YS2-8h14.p1k chr09 53 216 437473 437635 F 164 93.29 236 reject_low 5 ALIGNMENT 165 YS2-8h14.p1k chr06 218 28 6965 7154 C 191 96.86 236 ambiguous_tel 2 ALIGNMENT 132 YS2-8h14.p1k chr07 53 218 1082032 1082196 F 166 93.98 236 ambiguous_tel 4 ALIGNMENT 0 YS2-8h14.p1k chr07 219 236 1082196 1082195 F 18 0.00 236 ambiguous_tel 4 ALIGNMENT 0 YS2-8h15.p1k chr10 688 693 714753 715118 F 6 0.00 1361 reject_low 1 ALIGNMENT 0 YS2-8h15.p1k chr10 177 288 714014 714281 F 112 0.00 1361 reject_low 13 ALIGNMENT 196 YS2-8h15.p1k chr10 56 273 714337 714554 F 218 97.25 1361 reject_low 4 ALIGNMENT 0 YS2-8h15.p1k chr10 77 141 713979 713978 F 65 0.00 1361 reject_low 1,9,12,13,14,15,19,20 ALIGNMENT 20 YS2-8h15.p1k chr10 972 1000 714695 714723 F 29 96.55 1361 reject_low 16,17,18 ALIGNMENT 0 YS2-8h15.p1k chr10 77 285 713979 713978 F 209 0.00 1361 reject_low 18 ALIGNMENT 67 YS2-8h15.p1k chr10 413 489 714046 714122 F 77 96.10 1361 reject_low 19 ALIGNMENT 191 YS2-8h15.p1k chr10 289 489 714282 714482 F 201 99.00 1361 reject_low 13 ALIGNMENT 0 YS2-8h15.p1k chr10 177 432 714014 714281 F 256 0.00 1361 reject_low 20 ALIGNMENT 456 YS2-8h15.p1k chr10 217 687 714282 714752 F 471 100.00 1361 reject_low 1 ALIGNMENT 64 YS2-8h15.p1k chr10 56 129 714481 714554 F 74 95.95 1361 reject_low 10 ALIGNMENT 23 YS2-8h15.p1k chr10 70 104 713979 714013 F 35 88.57 1361 reject_low 7,8 ALIGNMENT 51 YS2-8h15.p1k chr10 433 489 714282 714338 F 57 96.49 1361 reject_low 20 ALIGNMENT 252 YS2-8h15.p1k chr10 73 345 714282 714554 F 273 98.17 1361 reject_low 3 ALIGNMENT 0 YS2-8h15.p1k chr10 77 357 713979 713978 F 281 0.00 1361 reject_low 17 ALIGNMENT 0 YS2-8h15.p1k chr10 321 971 714014 714694 F 651 0.00 1361 reject_low 18 ALIGNMENT 0 YS2-8h15.p1k chr10 418 693 714555 715118 F 276 0.00 1361 reject_low 8 ALIGNMENT 0 YS2-8h15.p1k chr10 177 216 714014 714281 F 40 0.00 1361 reject_low 1 ALIGNMENT 0 YS2-8h15.p1k chr10 393 971 714014 714694 F 579 0.00 1361 reject_low 17 ALIGNMENT 0 YS2-8h15.p1k chr10 177 340 714014 714045 F 164 0.00 1361 reject_low 14 ALIGNMENT 0 YS2-8h15.p1k chr10 490 693 714339 715118 F 204 0.00 1361 reject_low 20 ALIGNMENT 0 YS2-8h15.p1k chr10 490 693 714123 715118 F 204 0.00 1361 reject_low 19 ALIGNMENT 0 YS2-8h15.p1k chr10 105 124 714014 714045 F 20 0.00 1361 reject_low 7 ALIGNMENT 0 YS2-8h15.p1k chr10 177 360 714014 714281 F 184 0.00 1361 reject_low 15 ALIGNMENT 25 YS2-8h15.p1k chr10 358 392 713979 714013 F 35 91.43 1361 reject_low 17 ALIGNMENT 0 YS2-8h15.p1k chr10 469 693 714318 715118 F 225 0.00 1361 reject_low 9 ALIGNMENT 0 YS2-8h15.p1k chr10 184 693 714321 715118 F 510 0.00 1361 reject_low 6 ALIGNMENT 47 YS2-8h15.p1k chr10 56 111 714265 714320 F 56 94.64 1361 reject_low 11 ALIGNMENT 0 YS2-8h15.p1k chr10 130 693 714555 715118 F 564 0.00 1361 reject_low 10 ALIGNMENT 0 YS2-8h15.p1k chr10 274 693 714555 715118 F 420 0.00 1361 reject_low 4 ALIGNMENT 918 YS2-8h15.q1k chr10 1120 34 717819 718915 C 1087 95.95 1214 accept 0 ALIGNMENT 0 YS2-8h15.p1k chr10 112 693 714321 715118 F 582 0.00 1361 reject_low 11 ALIGNMENT 114 YS2-8h15.p1k chr10 56 183 714193 714320 F 128 96.88 1361 reject_low 6 ALIGNMENT 0 YS2-8h15.p1k chr10 490 693 714411 715118 F 204 0.00 1361 reject_low 15 ALIGNMENT 0 YS2-8h15.p1k chr10 202 693 714555 715118 F 492 0.00 1361 reject_low 5 ALIGNMENT 35 YS2-8h15.p1k chr10 694 828 715119 715253 F 135 80.00 1361 reject_low 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,19,20 ALIGNMENT 0 YS2-8h15.p1k chr10 177 196 714014 714045 F 20 0.00 1361 reject_low 9 ALIGNMENT 125 YS2-8h15.p1k chr10 56 201 714409 714554 F 146 95.89 1361 reject_low 5 ALIGNMENT 0 YS2-8h15.p1k chr10 77 213 713979 713978 F 137 0.00 1361 reject_low 16 ALIGNMENT 0 YS2-8h15.p1k chr10 400 693 714321 715118 F 294 0.00 1361 reject_low 7 ALIGNMENT 25 YS2-8h15.p1k chr10 286 320 713979 714013 F 35 91.43 1361 reject_low 18 ALIGNMENT 121 YS2-8h15.p1k chr10 361 489 714282 714410 F 129 98.45 1361 reject_low 15 ALIGNMENT 199 YS2-8h15.p1k chr10 269 489 714046 714266 F 221 97.29 1361 reject_low 12 ALIGNMENT 260 YS2-8h15.p1k chr10 145 417 714282 714554 F 273 99.27 1361 reject_low 8 ALIGNMENT 0 YS2-8h15.p1k chr10 105 144 714014 714281 F 40 0.00 1361 reject_low 8 ALIGNMENT 0 YS2-8h15.p1k chr10 249 971 714014 714694 F 723 0.00 1361 reject_low 16 ALIGNMENT 0 YS2-8h15.p1k chr10 328 693 714321 715118 F 366 0.00 1361 reject_low 2 ALIGNMENT 260 YS2-8h15.p1k chr10 125 399 714046 714320 F 275 98.91 1361 reject_low 7 ALIGNMENT 25 YS2-8h15.p1k chr10 142 176 713979 714013 F 35 91.43 1361 reject_low 1,9,12,13,14,15,19,20 ALIGNMENT 0 YS2-8h15.p1k chr10 177 412 714014 714045 F 236 0.00 1361 reject_low 19 ALIGNMENT 129 YS2-8h15.p1k chr10 341 489 714046 714194 F 149 95.97 1361 reject_low 14 ALIGNMENT 0 YS2-8h15.p1k chr10 346 693 714555 715118 F 348 0.00 1361 reject_low 3 ALIGNMENT 0 YS2-8h15.p1k chr10 829 887 715253 715252 F 59 0.00 1361 reject_low 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,19,20 ALIGNMENT 914 YS2-8h15.p1k chr10 56 1154 714121 715227 F 1099 96.82 1361 accept 0 ALIGNMENT 25 YS2-8h15.p1k chr10 214 248 713979 714013 F 35 91.43 1361 reject_low 16 ALIGNMENT 0 YS2-8h15.p1k chr10 490 693 714483 715118 F 204 0.00 1361 reject_low 13 ALIGNMENT 0 YS2-8h15.p1k chr10 490 693 714267 715118 F 204 0.00 1361 reject_low 12 ALIGNMENT 0 YS2-8h15.p1k chr10 177 268 714014 714045 F 92 0.00 1361 reject_low 12 ALIGNMENT 251 YS2-8h15.p1k chr10 197 468 714046 714317 F 272 98.16 1361 reject_low 9 ALIGNMENT 267 YS2-8h15.p1k chr10 56 327 714049 714320 F 272 100.00 1361 reject_low 2 ALIGNMENT 0 YS2-8h15.p1k chr10 490 693 714195 715118 F 204 0.00 1361 reject_low 14 ALIGNMENT 0 YS2-8h16.q1k vc_5 834 62 37 36 C 773 0.00 1276 reject_low 14 ALIGNMENT 0 YS2-8h16.q1k vc_1 833 62 2512 2511 C 772 0.00 1276 reject_low 10 ALIGNMENT 131 YS2-8h16.q1k vc_1 873 1233 2531 2893 F 361 80.61 1276 reject_low 2 ALIGNMENT 0 YS2-8h16.q1k vc_3 62 872 2531 2530 F 811 0.00 1276 reject_low 3 ALIGNMENT 0 YS2-8h16.q1k vc_4 62 833 5832 5831 F 772 0.00 1276 reject_low 8 ALIGNMENT 38 YS2-8h16.q1k vc_7 836 873 13525 13562 F 38 100.00 1276 reject_low 13 ALIGNMENT 131 YS2-8h16.q1k vc_5 873 1233 2398 2760 F 361 80.61 1276 reject_low 4 ALIGNMENT 0 YS2-8h16.q1k vc_4 872 62 5813 5812 C 811 0.00 1276 reject_low 5 ALIGNMENT 0 YS2-8h16.q1k vc_1 62 872 2531 2530 F 811 0.00 1276 reject_low 2 ALIGNMENT 124 YS2-8h16.q1k vc_4 1233 873 5448 5812 C 361 80.06 1276 reject_low 5 ALIGNMENT 0 YS2-8h16.q1k vc_3 833 62 2512 2511 C 772 0.00 1276 reject_low 11 ALIGNMENT 40 YS2-8h16.q1k vc_4 834 873 5832 5871 F 40 100.00 1276 reject_low 8 ALIGNMENT 36 YS2-8h16.q1k vc_5 870 835 1 36 C 36 100.00 1276 reject_low 14 ALIGNMENT 768 YS2-8h16.p1k chr04 27 828 919244 920045 F 802 99.75 828 accept_chi 0 ALIGNMENT 105 YS2-8h16.q1k vc_4 873 1020 6353 6503 F 148 91.22 1276|1,0 reject_low 8 ALIGNMENT 0 YS2-8h16.q1k vc_4 872 62 1535 1534 C 811 0.00 1276 reject_low 9 ALIGNMENT 0 YS2-8h16.q1k vc_4 62 872 126 125 F 811 0.00 1276 reject_low 7 ALIGNMENT 39 YS2-8h16.q1k vc_5 873 835 5025 5063 C 39 100.00 1276 reject_low 12 ALIGNMENT 0 YS2-8h16.q1k vc_7 872 62 2728 2727 C 811 0.00 1276 reject_low 6 ALIGNMENT 40 YS2-8h16.q1k vc_1 873 834 2472 2511 C 40 100.00 1276 reject_low 10 ALIGNMENT 105 YS2-8h16.q1k vc_4 873 1020 126 276 F 148 91.22 1276 reject_low 7 ALIGNMENT 126 YS2-8h16.q1k vc_7 1152 873 2444 2727 C 280 83.57 1276 reject_low 6 ALIGNMENT 0 YS2-8h16.q1k vc_5 834 62 5064 5063 C 773 0.00 1276 reject_low 12 ALIGNMENT 0 YS2-8h16.q1k vc_4 874 873 5872 6353 F 0 0.00 1276 reject_low 8 ALIGNMENT 0 YS2-8h16.q1k vc_5 62 872 2398 2397 F 811 0.00 1276 reject_low 4 ALIGNMENT 766 YS2-8h16.q1k chr04 832 30 919244 920046 C 803 99.63 1276 accept_chi 1 ALIGNMENT 131 YS2-8h16.q1k vc_3 873 1233 2531 2893 F 361 80.61 1276 reject_low 3 ALIGNMENT 0 YS2-8h16.q1k vc_7 62 835 13525 13524 F 774 0.00 1276 reject_low 13 ALIGNMENT 40 YS2-8h16.q1k vc_3 873 834 2472 2511 C 40 100.00 1276 reject_low 11 ALIGNMENT 63 YS2-8h16.q1k vc_4 959 873 1446 1534 C 87 91.95 1276 reject_low 9 ALIGNMENT 0 YS2-8h17.q1k chr04 342 305 509248 509247 C 38 0.00 342 accept_chi 0 ALIGNMENT 0 YS2-8h17.q1k vc_4 62 303 5833 5832 F 242 0.00 342 reject_low 5 ALIGNMENT 39 YS2-8h17.q1k vc_1 342 304 2472 2510 C 39 100.00 342 reject_low 2 ALIGNMENT 0 YS2-8h17.q1k vc_5 303 62 37 36 C 242 0.00 342 reject_low 9 ALIGNMENT 39 YS2-8h17.q1k vc_5 342 304 5025 5063 C 39 100.00 342 reject_low 6 ALIGNMENT 0 YS2-8h17.q1k vc_2 303 62 2144 2143 C 242 0.00 342 reject_low 3 ALIGNMENT 0 YS2-8h17.q1k vc_7 62 304 13525 13524 F 243 0.00 342 reject_low 8 ALIGNMENT 39 YS2-8h17.q1k vc_3 342 304 2472 2510 C 39 100.00 342 reject_low 4 ALIGNMENT 232 YS2-8h17.q1k chr04 304 38 509247 509513 C 267 99.25 342 accept_chi 0 ALIGNMENT 39 YS2-8h17.q1k vc_2 342 304 2105 2143 C 39 100.00 342 reject_low 3 ALIGNMENT 38 YS2-8h17.q1k vc_7 305 342 13525 13562 F 38 100.00 342 reject_low 8 ALIGNMENT 0 YS2-8h17.q1k vc_7 62 304 63 62 F 243 0.00 342 reject_low 7 ALIGNMENT 0 YS2-8h17.q1k vc_5 303 62 5064 5063 C 242 0.00 342 reject_low 6 ALIGNMENT 227 YS2-8h17.p1k chr04 27 292 509247 509513 F 266 98.87 310 accept_chi 1 ALIGNMENT 38 YS2-8h17.q1k vc_7 305 342 63 100 F 38 100.00 342 reject_low 7 ALIGNMENT 0 YS2-8h17.p1k chr04 293 310 509513 509512 F 18 0.00 310 accept_chi 1 ALIGNMENT 0 YS2-8h17.q1k vc_1 303 62 2511 2510 C 242 0.00 342 reject_low 2 ALIGNMENT 0 YS2-8h17.q1k vc_3 303 62 2511 2510 C 242 0.00 342 reject_low 4 ALIGNMENT 39 YS2-8h17.q1k vc_4 304 342 5833 5871 F 39 100.00 342 reject_low 5 ALIGNMENT 36 YS2-8h17.q1k vc_5 339 304 1 36 C 36 100.00 342 reject_low 9 ALIGNMENT 941 YS2-8h18.q1k chr04 35 1176 957759 958900 F 1142 95.36 1247 accept 0 ALIGNMENT 971 YS2-8h18.p1k chr04 1194 25 960948 962125 C 1170 95.30 1322 accept 0 ALIGNMENT 855 YS2-8h19.p1k chr10 29 1015 161437 162436 F 987 96.96 1219 accept 0 ALIGNMENT 952 YS2-8h19.q1k chr10 1107 41 164186 165258 C 1067 97.84 1192 accept 0 ALIGNMENT 958 YS2-8h20.q1k chr04 1135 38 1390742 1391839 C 1098 96.63 1201 accept 0 ALIGNMENT 353 YS2-8h20.p1k chr04 27 525 1388299 1388813 F 499 92.38 979 accept 0 ALIGNMENT 916 YS2-8h21.q1k chr11 40 1094 598142 599200 F 1055 96.21 1170 accept_chi 0 ALIGNMENT 444 YS2-8h21.p1k chr11 185 791 526558 527161 F 607 91.43 1034 accept_chi 1 ALIGNMENT 926 YS2-8h23.q1k chr12 42 1044 462174 463173 F 1003 98.01 1044 accept 1 ALIGNMENT 926 YS2-8h23.q1k chr12 42 1044 453037 454036 F 1003 98.01 1044 accept 0 ALIGNMENT 913 YS2-8h24.q1k chr04 25 1043 481183 482196 F 1019 97.64 1047 accept 0 ALIGNMENT 1014 YS2-8h24.p1k chr04 1189 30 485045 486195 C 1160 96.64 1217 accept 0 ALIGNMENT 976 YS2-8i01.p1k chr04 1171 32 188249 189408 C 1140 96.32 1214 accept 0 ALIGNMENT 907 YS2-8i01.q1k chr04 35 1104 185546 186601 F 1070 97.01 1157 accept 0 ALIGNMENT 41 YS2-8i02.q1k vc_3 695 655 2472 2512 C 41 100.00 695 reject_low 4 ALIGNMENT 0 YS2-8i02.q1k vc_7 62 657 63 62 F 596 0.00 695 reject_low 9 ALIGNMENT 21 YS2-8i02.q1k chr04 100 68 834000 834032 C 33 90.91 695 reject_low 7 ALIGNMENT 0 YS2-8i02.q1k chr04 695 101 834001 834000 C 595 0.00 695 reject_low 7 ALIGNMENT 0 YS2-8i02.q1k vc_5 656 62 37 36 C 595 0.00 695 reject_low 11 ALIGNMENT 21 YS2-8i02.p1k chr04 588 620 834000 834032 F 33 90.91 668 reject_low 6 ALIGNMENT 36 YS2-8i02.q1k vc_5 692 657 1 36 C 36 100.00 695 reject_low 11 ALIGNMENT 39 YS2-8i02.q1k vc_5 695 657 5025 5063 C 39 100.00 695 reject_low 8 ALIGNMENT 0 YS2-8i02.p1k chr04 621 668 834032 834031 F 48 0.00 668 reject_low 6 ALIGNMENT 0 YS2-8i02.p1k chr04 62 587 834000 833999 F 526 0.00 668 reject_low 6 ALIGNMENT 0 YS2-8i02.q1k vc_3 654 62 2513 2512 C 593 0.00 695 reject_low 4 ALIGNMENT 0 YS2-8i02.p1k chr16 651 668 696408 696407 F 18 0.00 668 accept_chi 0 ALIGNMENT 0 YS2-8i02.q1k vc_7 62 657 13525 13524 F 596 0.00 695 reject_low 10 ALIGNMENT 611 YS2-8i02.q1k chr16 657 38 695789 696408 C 620 100.00 695 accept_chi 1 ALIGNMENT 0 YS2-8i02.q1k chr16 695 658 695790 695789 C 38 0.00 695 accept_chi 1 ALIGNMENT 0 YS2-8i02.q1k vc_5 656 62 5064 5063 C 595 0.00 695 reject_low 8 ALIGNMENT 38 YS2-8i02.q1k vc_7 658 695 13525 13562 F 38 100.00 695 reject_low 10 ALIGNMENT 0 YS2-8i02.q1k vc_4 62 654 5831 5830 F 593 0.00 695 reject_low 5 ALIGNMENT 41 YS2-8i02.q1k vc_4 655 695 5831 5871 F 41 100.00 695 reject_low 5 ALIGNMENT 41 YS2-8i02.q1k vc_1 695 655 2472 2512 C 41 100.00 695 reject_low 2 ALIGNMENT 38 YS2-8i02.q1k vc_7 658 695 63 100 F 38 100.00 695 reject_low 9 ALIGNMENT 0 YS2-8i02.q1k vc_1 654 62 2513 2512 C 593 0.00 695 reject_low 2 ALIGNMENT 611 YS2-8i02.p1k chr16 31 650 695789 696408 F 620 100.00 668 accept_chi 0 ALIGNMENT 41 YS2-8i02.q1k vc_2 695 655 2105 2145 C 41 100.00 695 reject_low 3 ALIGNMENT 0 YS2-8i02.q1k vc_2 654 62 2146 2145 C 593 0.00 695 reject_low 3 ALIGNMENT 0 YS2-8i05.q1k chr02 906 788 575445 575444 C 119 0.00 1251 reject_low 1 ALIGNMENT 0 YS2-8i05.q1k chr02 239 62 575992 575991 C 178 0.00 1251 reject_low 1 ALIGNMENT 103 YS2-8i05.q1k chr02 787 240 575444 575991 C 548 73.36 1251 reject_low 1 ALIGNMENT 982 YS2-8i05.q1k chr16 1140 38 351369 352473 C 1103 96.92 1251 accept 0 ALIGNMENT 822 YS2-8i05.p1k chr16 34 1027 347734 348728 F 994 95.17 1268 accept 0 ALIGNMENT 1029 YS2-8i06.q1k chr07 40 1257 1000222 1001441 F 1218 94.91 1260 accept 0 ALIGNMENT 192 YS2-8i06.p1k chr07 646 342 1005486 1005770 C 305 91.48 1155 accept 0 ALIGNMENT 239 YS2-8i06.q1k chr08 749 1256 451326 451835 F 508 82.09 1260 reject_low 1 ALIGNMENT 0 YS2-8i06.q1k chr08 62 748 451326 451325 F 687 0.00 1260 reject_low 1 ALIGNMENT 954 YS2-8i07.q1k chr13 1148 42 369775 370889 C 1107 95.03 1265 accept 0 ALIGNMENT 1016 YS2-8i07.p1k chr13 30 1186 368083 369245 F 1157 96.54 1296 accept 0 ALIGNMENT 1003 YS2-8i08.p1k chr12 1129 24 461906 463024 C 1106 97.47 1329 accept 0 ALIGNMENT 0 YS2-8i08.q1k chr06 892 62 31731 31730 C 831 0.00 1277 reject_low 3 ALIGNMENT 90 YS2-8i08.q1k chr06 1000 893 31622 31730 C 108 97.22 1277 reject_low 3 ALIGNMENT 1003 YS2-8i08.p1k chr12 1129 24 452769 453887 C 1106 97.47 1329 reject_low 1 ALIGNMENT 950 YS2-8i08.q1k chr12 39 1192 467591 468760 F 1154 96.27 1277 reject_low 2 ALIGNMENT 950 YS2-8i08.q1k chr12 39 1192 458454 459623 F 1154 96.27 1277 accept 0 ALIGNMENT 960 YS2-8i09.q1k chr04 39 1176 23951 25093 F 1138 95.61 1293 accept 0 ALIGNMENT 970 YS2-8i09.p1k chr04 1185 30 27400 28561 C 1156 95.33 1345 accept 0 ALIGNMENT 915 YS2-8i11.q1k chr01 1089 39 102936 104000 C 1051 97.24 1349 accept 0 ALIGNMENT 1009 YS2-8i11.p1k chr01 29 1250 99487 100729 F 1222 95.91 1341 accept 0 ALIGNMENT 929 YS2-8i12.q1k chr04 1127 39 919842 920946 C 1089 96.14 1334 accept 0 ALIGNMENT 323 YS2-8i12.p1k chr02 614 206 235395 235803 C 409 93.40 1445 reject_low 1 ALIGNMENT 1093 YS2-8i12.p1k chr04 34 1325 915344 916639 F 1292 95.59 1445 accept 0 ALIGNMENT 0 YS2-8i12.p1k chr02 929 615 235396 235395 C 315 0.00 1445 reject_low 1 ALIGNMENT 0 YS2-8i12.p1k chr02 205 62 235804 235803 C 144 0.00 1445 reject_low 1 ALIGNMENT 946 YS2-8i13.q1k chr12 1200 27 261333 262498 C 1174 94.80 1260 accept 0 ALIGNMENT 776 YS2-8i13.p1k chr12 28 1075 259973 261018 F 1048 92.08 1336 accept 0 ALIGNMENT 925 YS2-8i14.p1k chr16 29 1185 347729 348896 F 1157 94.38 1337 accept 0 ALIGNMENT 176 YS2-8i14.q1k chr02 1116 241 575116 575991 C 876 73.97 1278 reject_low 1 ALIGNMENT 0 YS2-8i14.q1k chr02 240 62 575992 575991 C 179 0.00 1278 reject_low 1 ALIGNMENT 1058 YS2-8i14.q1k chr16 1262 40 351248 352473 C 1223 96.16 1278 accept 0 ALIGNMENT 964 YS2-8i15.q1k chr14 1216 38 738266 739446 C 1179 95.00 1260 accept 0 ALIGNMENT 984 YS2-8i15.p1k chr14 30 1236 736611 737828 F 1207 94.20 1278 accept 0 ALIGNMENT 1012 YS2-8i16.p1k chr05 30 1156 338540 339665 F 1127 97.07 1334 accept 0 ALIGNMENT 1038 YS2-8i16.q1k chr05 1207 30 342237 343421 C 1178 96.69 1244 accept 0 ALIGNMENT 0 YS2-8i17.p1k chrm 962 373 2537 2536 C 590 0.00 1317 reject_low 1 ALIGNMENT 0 YS2-8i17.p1k chrm 62 297 34191 34190 F 236 0.00 1317 reject_low 5 ALIGNMENT 63 YS2-8i17.p1k chrm 372 298 2536 2608 C 75 96.00 1317 reject_low 1 ALIGNMENT 0 YS2-8i17.p1k chrm 962 357 50727 50726 C 606 0.00 1317 reject_low 3 ALIGNMENT 578 YS2-8i17.p1k chrm 37 1153 57569 58671 F 1117 91.58 1317 accept 0 ALIGNMENT 0 YS2-8i17.p1k chrm 297 62 50779 50778 C 236 0.00 1317 reject_low 3 ALIGNMENT 0 YS2-8i17.p1k chrm 328 327 34221 34213 F 0 0.00 1317 reject_low 5 ALIGNMENT 30 YS2-8i17.p1k chrm 298 327 34191 34220 F 30 100.00 1317 reject_low 5 ALIGNMENT 22 YS2-8i17.p1k chrm 356 298 50726 50778 C 59 86.44 1317 reject_low 3 ALIGNMENT 0 YS2-8i17.p1k chrm 962 357 68613 68612 C 606 0.00 1317 reject_low 2 ALIGNMENT 49 YS2-8i17.p1k chrm 356 298 68612 68668 C 59 96.61 1317 reject_low 2 ALIGNMENT 30 YS2-8i17.p1k chrm 342 371 35111 35140 F 30 100.00 1317|8,0 reject_low 5 ALIGNMENT 0 YS2-8i17.p1k chrm 300 62 62551 62550 C 239 0.00 1317 reject_low 4 ALIGNMENT 0 YS2-8i17.p1k chrm 297 62 68669 68668 C 236 0.00 1317 reject_low 2 ALIGNMENT 912 YS2-8i17.q1k chrm 1222 38 59145 60333 C 1185 96.96 1222 accept 0 ALIGNMENT 0 YS2-8i17.p1k chrm 962 323 62530 62529 C 640 0.00 1317 reject_low 4 ALIGNMENT 29 YS2-8i17.p1k chrm 328 356 34214 34242 F 29 100.00 1317|0,7 reject_low 5 ALIGNMENT 0 YS2-8i17.p1k chrm 372 962 35140 35139 F 591 0.00 1317 reject_low 5 ALIGNMENT 22 YS2-8i17.p1k chrm 322 301 62529 62550 C 22 100.00 1317 reject_low 4 ALIGNMENT 0 YS2-8i17.p1k chrm 297 62 2609 2608 C 236 0.00 1317 reject_low 1 ALIGNMENT 0 YS2-8i17.p1k chrm 350 349 34236 35118 F 0 0.00 1317 reject_low 5 ALIGNMENT 0 YS2-8i18.q1k chr02 318 882 353650 353649 F 565 0.00 1219 reject_low 2 ALIGNMENT 907 YS2-8i18.p1k chr04 35 1137 143489 144603 F 1103 95.01 1384 accept 0 ALIGNMENT 0 YS2-8i18.q1k chr04 315 882 226876 226875 F 568 0.00 1219 reject_low 3 ALIGNMENT 0 YS2-8i18.q1k chr04 62 284 226847 226846 F 223 0.00 1219 reject_low 3 ALIGNMENT 0 YS2-8i18.q1k chr15 317 882 301321 301320 F 566 0.00 1219 reject_low 5 ALIGNMENT 1008 YS2-8i18.q1k chr04 1201 36 146788 147959 C 1166 95.80 1219 accept 0 ALIGNMENT 22 YS2-8i18.q1k chr02 285 317 353618 353650 F 33 96.97 1219 reject_low 2 ALIGNMENT 0 YS2-8i18.q1k chr15 62 289 301295 301294 F 228 0.00 1219 reject_low 5 ALIGNMENT 0 YS2-8i18.q1k chr10 289 62 639955 639954 C 228 0.00 1219 reject_low 4 ALIGNMENT 20 YS2-8i18.q1k chr15 290 316 301295 301321 F 27 100.00 1219 reject_low 5 ALIGNMENT 0 YS2-8i18.q1k chr01 284 62 31522 31521 C 223 0.00 1219 reject_low 1 ALIGNMENT 0 YS2-8i18.q1k chr10 882 318 639928 639927 C 565 0.00 1219 reject_low 4 ALIGNMENT 0 YS2-8i18.q1k chr02 62 284 353618 353617 F 223 0.00 1219 reject_low 2 ALIGNMENT 21 YS2-8i18.q1k chr10 317 290 639927 639954 C 28 100.00 1219 reject_low 4 ALIGNMENT 22 YS2-8i18.q1k chr01 317 285 31489 31521 C 33 96.97 1219 reject_low 1 ALIGNMENT 0 YS2-8i18.q1k chr01 882 318 31490 31489 C 565 0.00 1219 reject_low 1 ALIGNMENT 20 YS2-8i18.q1k chr04 285 314 226847 226876 F 30 96.67 1219 reject_low 3 ALIGNMENT 900 YS2-8i19.p1k chr07 1085 40 947344 948402 C 1046 96.46 1211 accept 0 ALIGNMENT 1002 YS2-8i19.q1k chr07 33 1121 942731 943815 F 1089 97.89 1121 accept 0 ALIGNMENT 706 YS2-8i20.p1k chr11 755 28 395892 396619 C 728 99.45 773 accept_chi 0 ALIGNMENT 0 YS2-8i20.p1k chr11 773 756 395893 395892 C 18 0.00 773 accept_chi 0 ALIGNMENT 706 YS2-8i20.q1k chr11 38 765 395892 396619 F 728 99.45 766 accept_chi 1 ALIGNMENT 955 YS2-8i22.p1k chr11 33 1093 456381 457446 F 1061 96.98 1352 accept 0 ALIGNMENT 957 YS2-8i22.q1k chr11 1164 40 459404 460513 C 1125 96.44 1166 accept 0 ALIGNMENT 41 YS2-8j01.q1k vc_1 576 536 2472 2512 C 41 100.00 576 reject_low 2 ALIGNMENT 0 YS2-8j01.q1k vc_5 537 62 37 36 C 476 0.00 576 reject_low 7 ALIGNMENT 0 YS2-8j01.q1k vc_7 62 538 13525 13524 F 477 0.00 576 reject_low 6 ALIGNMENT 0 YS2-8j01.q1k chr08 576 537 500324 500323 C 40 0.00 576 accept_chi 0 ALIGNMENT 38 YS2-8j01.q1k vc_7 539 576 13525 13562 F 38 100.00 576 reject_low 6 ALIGNMENT 39 YS2-8j01.q1k vc_5 576 538 5025 5063 C 39 100.00 576 reject_low 5 ALIGNMENT 41 YS2-8j01.q1k vc_4 536 576 5831 5871 F 41 100.00 576 reject_low 4 ALIGNMENT 479 YS2-8j01.p1k chr08 34 530 500323 500820 F 497 99.80 549 accept_chi 1 ALIGNMENT 0 YS2-8j01.q1k vc_4 62 535 5831 5830 F 474 0.00 576 reject_low 4 ALIGNMENT 0 YS2-8j01.q1k vc_3 535 62 2513 2512 C 474 0.00 576 reject_low 3 ALIGNMENT 41 YS2-8j01.q1k vc_3 576 536 2472 2512 C 41 100.00 576 reject_low 3 ALIGNMENT 0 YS2-8j01.p1k chr08 531 549 500820 500819 F 19 0.00 549 accept_chi 1 ALIGNMENT 0 YS2-8j01.q1k vc_5 537 62 5064 5063 C 476 0.00 576 reject_low 5 ALIGNMENT 484 YS2-8j01.q1k chr08 536 39 500323 500820 C 498 100.00 576 accept_chi 0 ALIGNMENT 36 YS2-8j01.q1k vc_5 573 538 1 36 C 36 100.00 576 reject_low 7 ALIGNMENT 0 YS2-8j01.q1k vc_1 535 62 2513 2512 C 474 0.00 576 reject_low 2 ALIGNMENT 497 YS2-8j02.q1k chr08 798 35 173147 173906 C 764 89.79 1329 accept 0 ALIGNMENT 638 YS2-8j03.q1k chr12 41 739 892128 892825 F 699 98.00 1129 accept 0 ALIGNMENT 980 YS2-8j04.p1k chr15 30 1194 150187 151359 F 1165 95.54 1290 accept 0 ALIGNMENT 376 YS2-8j04.q1k chr15 648 35 151078 151688 C 614 88.44 1235 accept 0 ALIGNMENT 0 YS2-8j06.p1k chr15 206 190 531839 531838 C 17 0.00 206 accept 0 ALIGNMENT 150 YS2-8j06.p1k chr15 189 30 531838 531997 C 160 100.00 206 accept 0 ALIGNMENT 0 YS2-8j07.q1k chr15 899 477 575099 575098 C 423 0.00 1285 reject_low 1 ALIGNMENT 429 YS2-8j07.q1k chr15 476 39 575098 575536 C 438 99.54 1285 reject_low 1 ALIGNMENT 971 YS2-8j07.q1k chr04 1109 39 1242579 1243658 C 1071 97.39 1285 accept 0 ALIGNMENT 882 YS2-8j07.p1k chr04 31 1038 1242041 1243073 F 1008 96.83 1263 accept 0 ALIGNMENT 990 YS2-8j08.p1k chr12 1173 31 466567 467719 C 1143 96.24 1283 accept_chi 1 ALIGNMENT 990 YS2-8j08.p1k chr12 1173 31 457430 458582 C 1143 96.24 1283 accept_chi 0 ALIGNMENT 912 YS2-8j08.q1k chr04 1119 26 1141576 1142684 C 1094 95.34 1185 accept_chi 2 ALIGNMENT 825 YS2-8j09.p1k chr04 30 985 822960 823930 F 956 97.07 1130 accept 0 ALIGNMENT 987 YS2-8j09.q1k chr04 1187 36 825913 827079 C 1152 96.01 1274 accept 0 ALIGNMENT 801 YS2-8j10.q1k chr08 1009 35 74256 75225 C 975 95.28 1216 accept 0 ALIGNMENT 1022 YS2-8j10.p1k chr08 32 1235 69662 70870 F 1204 94.85 1369 accept 0 ALIGNMENT 580 YS2-8j11.q1k chr12 33 615 461606 462188 F 583 100.00 615 reject_low 1 ALIGNMENT 0 YS2-8j11.p1k chr12 510 62 490544 490543 C 449 0.00 635 reject_low 3 ALIGNMENT 0 YS2-8j11.p1k chr12 635 618 490438 490437 C 18 0.00 635 reject_low 3 ALIGNMENT 100 YS2-8j11.q1k chr12 33 139 490437 490543 F 107 98.13 615 reject_low 4 ALIGNMENT 575 YS2-8j11.p1k chr12 617 36 452469 453051 C 582 99.83 635 reject_low 2 ALIGNMENT 580 YS2-8j11.q1k chr12 33 615 452469 453051 F 583 100.00 615 accept 0 ALIGNMENT 0 YS2-8j11.q1k chr12 140 615 490543 490542 F 476 0.00 615 reject_low 4 ALIGNMENT 0 YS2-8j11.p1k chr12 635 618 461607 461606 C 18 0.00 635 accept 0 ALIGNMENT 0 YS2-8j11.p1k chr12 635 618 452470 452469 C 18 0.00 635 reject_low 2 ALIGNMENT 100 YS2-8j11.p1k chr12 617 511 490437 490543 C 107 98.13 635 reject_low 3 ALIGNMENT 575 YS2-8j11.p1k chr12 617 36 461606 462188 C 582 99.83 635 accept 0 ALIGNMENT 42 YS2-8j12.q1k vc_3 246 205 2472 2513 C 42 100.00 246 reject_low 3 ALIGNMENT 0 YS2-8j12.q1k vc_3 204 62 2514 2513 C 143 0.00 246 reject_low 3 ALIGNMENT 0 YS2-8j12.q1k vc_7 62 208 13525 13524 F 147 0.00 246 reject_low 6 ALIGNMENT 36 YS2-8j12.q1k vc_5 243 208 1 36 C 36 100.00 246 reject_low 7 ALIGNMENT 0 YS2-8j12.q1k vc_2 204 62 2147 2146 C 143 0.00 246 reject_low 2 ALIGNMENT 158 YS2-8j12.q1k chr07 35 205 5186 5357 F 171 98.83 246 accept 0 ALIGNMENT 42 YS2-8j12.q1k vc_4 205 246 5830 5871 F 42 100.00 246 reject_low 4 ALIGNMENT 0 YS2-8j12.q1k vc_4 62 204 5830 5829 F 143 0.00 246 reject_low 4 ALIGNMENT 0 YS2-8j12.q1k vc_1 204 62 2514 2513 C 143 0.00 246 reject_low 1 ALIGNMENT 0 YS2-8j12.q1k vc_5 207 62 37 36 C 146 0.00 246 reject_low 7 ALIGNMENT 0 YS2-8j12.q1k vc_5 207 62 5064 5063 C 146 0.00 246 reject_low 5 ALIGNMENT 42 YS2-8j12.q1k vc_1 246 205 2472 2513 C 42 100.00 246 reject_low 1 ALIGNMENT 42 YS2-8j12.q1k vc_2 246 205 2105 2146 C 42 100.00 246 reject_low 2 ALIGNMENT 38 YS2-8j12.q1k vc_7 209 246 13525 13562 F 38 100.00 246 reject_low 6 ALIGNMENT 39 YS2-8j12.q1k vc_5 246 208 5025 5063 C 39 100.00 246 reject_low 5 ALIGNMENT 0 YS2-8j12.q1k chr07 206 246 5357 5356 F 41 0.00 246 accept 0 ALIGNMENT 723 YS2-8j13.p1k chr15 35 791 782560 783316 F 757 99.74 791 accept_chi 0 ALIGNMENT 717 YS2-8j13.q1k chr15 794 43 782560 783310 C 752 99.73 795 accept_chi 1 ALIGNMENT 986 YS2-8j14.p1k chr12 1162 36 243847 244982 C 1127 96.63 1342 accept 0 ALIGNMENT 931 YS2-8j14.q1k chr12 38 1206 243715 244880 F 1169 95.38 1267 accept 0 ALIGNMENT 190 YS2-8j15.q1k chr02 656 392 3051 3315 C 265 90.57 656 reject_low 32 ALIGNMENT 182 YS2-8j15.p1k chr12 28 290 2850 3114 F 263 90.11 672 reject_low 3 ALIGNMENT 182 YS2-8j15.p1k chr15 290 28 1088330 1088594 C 263 90.11 672 reject_low 12 ALIGNMENT 0 YS2-8j15.q1k chr07 62 391 1088071 1088070 F 330 0.00 656 reject_low 24 ALIGNMENT 182 YS2-8j15.p1k chr16 28 290 2542 2806 F 263 90.11 672 reject_low 13 ALIGNMENT 173 YS2-8j15.p1k chr08 28 290 2582 2846 F 263 88.97 672 reject_low 21 ALIGNMENT 193 YS2-8j15.q1k chr05 392 656 573994 574258 F 265 90.94 656 reject_low 23 ALIGNMENT 182 YS2-8j15.p1k chr16 290 28 945063 945327 C 263 90.11 672 reject_low 14 ALIGNMENT 0 YS2-8j15.p1k chr08 672 291 559517 559516 C 382 0.00 672 reject_low 18 ALIGNMENT 0 YS2-8j15.q1k chr05 391 62 2962 2961 C 330 0.00 656 reject_low 35 ALIGNMENT 338 YS2-8j15.p1k chr12 653 288 455854 456213 C 366 98.36 672 reject_low 1 ALIGNMENT 179 YS2-8j15.p1k chr10 28 290 3004 3268 F 263 89.73 672 reject_low 20 ALIGNMENT 182 YS2-8j15.p1k chr12 28 290 8385 8649 F 263 90.11 672 reject_low 8 ALIGNMENT 0 YS2-8j15.p1k chr12 287 62 465351 465350 C 226 0.00 672 accept 0 ALIGNMENT 0 YS2-8j15.p1k chr02 291 672 3315 3314 F 382 0.00 672 reject_low 15 ALIGNMENT 0 YS2-8j15.q1k chr12 62 391 1068703 1068702 F 330 0.00 656 reject_low 4 ALIGNMENT 0 YS2-8j15.q1k chr12 391 62 3115 3114 C 330 0.00 656 reject_low 25 ALIGNMENT 193 YS2-8j15.q1k chr13 656 392 2726 2990 C 265 90.94 656 reject_low 27 ALIGNMENT 182 YS2-8j15.p1k chr12 290 28 1075366 1075630 C 263 90.11 672 reject_low 4 ALIGNMENT 0 YS2-8j15.q1k chr16 62 391 945063 945062 F 330 0.00 656 reject_low 31 ALIGNMENT 181 YS2-8j15.q1k chr08 656 392 2582 2846 C 265 89.43 656 reject_low 38 ALIGNMENT 0 YS2-8j15.q1k chr06 391 62 2152 2151 C 330 0.00 656 reject_low 33 ALIGNMENT 0 YS2-8j15.q1k chr08 391 62 2847 2846 C 330 0.00 656 reject_low 38 ALIGNMENT 0 YS2-8j15.p1k chr08 291 672 2846 2845 F 382 0.00 672 reject_low 21 ALIGNMENT 0 YS2-8j15.p1k chr09 291 672 3285 3284 F 382 0.00 672 reject_low 19 ALIGNMENT 0 YS2-8j15.p1k chr10 291 672 3268 3267 F 382 0.00 672 reject_low 20 ALIGNMENT 190 YS2-8j15.q1k chr08 392 656 559516 559780 F 265 90.57 656 reject_low 34 ALIGNMENT 182 YS2-8j15.p1k chr07 290 28 1088071 1088335 C 263 90.11 672 reject_low 7 ALIGNMENT 0 YS2-8j15.p1k chr05 291 672 2961 2960 F 382 0.00 672 reject_low 16 ALIGNMENT 193 YS2-8j15.q1k chr12 392 656 1068703 1068967 F 265 90.94 656 reject_low 4 ALIGNMENT 334 YS2-8j15.q1k chr12 28 394 455854 456213 F 367 98.09 656 accept 0 ALIGNMENT 182 YS2-8j15.p1k chr05 290 28 573994 574258 C 263 90.11 672 reject_low 6 ALIGNMENT 182 YS2-8j15.p1k chr13 28 290 2726 2990 F 263 90.11 672 reject_low 10 ALIGNMENT 0 YS2-8j15.p1k chr04 672 291 1529166 1529165 C 382 0.00 672 reject_low 5 ALIGNMENT 0 YS2-8j15.p1k chr12 672 291 1075367 1075366 C 382 0.00 672 reject_low 4 ALIGNMENT 0 YS2-8j15.p1k chr12 291 672 8649 8648 F 382 0.00 672 reject_low 8 ALIGNMENT 193 YS2-8j15.q1k chr14 656 392 2633 2897 C 265 90.94 656 reject_low 28 ALIGNMENT 0 YS2-8j15.p1k chr12 287 62 456214 456213 C 226 0.00 672 reject_low 1 ALIGNMENT 182 YS2-8j15.p1k chr04 290 28 1529165 1529429 C 263 90.11 672 reject_low 5 ALIGNMENT 0 YS2-8j15.p1k chr13 291 672 2990 2989 F 382 0.00 672 reject_low 10 ALIGNMENT 0 YS2-8j15.q1k chr14 391 62 2898 2897 C 330 0.00 656 reject_low 28 ALIGNMENT 193 YS2-8j15.q1k chr16 656 392 2542 2806 C 265 90.94 656 reject_low 30 ALIGNMENT 179 YS2-8j15.p1k chr06 28 290 1887 2151 F 263 89.73 672 reject_low 17 ALIGNMENT 179 YS2-8j15.p1k chr02 28 290 3051 3315 F 263 89.73 672 reject_low 15 ALIGNMENT 0 YS2-8j15.p1k chr14 291 672 2897 2896 F 382 0.00 672 reject_low 11 ALIGNMENT 0 YS2-8j15.p1k chr16 672 291 945064 945063 C 382 0.00 672 reject_low 14 ALIGNMENT 0 YS2-8j15.q1k chr12 395 656 456213 456212 F 262 0.00 656 accept 0 ALIGNMENT 0 YS2-8j15.q1k chr10 391 62 3269 3268 C 330 0.00 656 reject_low 37 ALIGNMENT 0 YS2-8j15.q1k chr13 391 62 2991 2990 C 330 0.00 656 reject_low 27 ALIGNMENT 0 YS2-8j15.q1k chr04 62 391 1529165 1529164 F 330 0.00 656 reject_low 22 ALIGNMENT 0 YS2-8j15.q1k chr12 391 62 8650 8649 C 330 0.00 656 reject_low 3 ALIGNMENT 193 YS2-8j15.q1k chr12 656 392 2850 3114 C 265 90.94 656 reject_low 25 ALIGNMENT 190 YS2-8j15.q1k chr06 656 392 1887 2151 C 265 90.57 656 reject_low 33 ALIGNMENT 179 YS2-8j15.p1k chr05 28 290 2697 2961 F 263 89.73 672 reject_low 16 ALIGNMENT 0 YS2-8j15.q1k chr15 62 391 1088330 1088329 F 330 0.00 656 reject_low 29 ALIGNMENT 338 YS2-8j15.p1k chr12 653 288 464991 465350 C 366 98.36 672 accept 0 ALIGNMENT 193 YS2-8j15.q1k chr12 392 656 1075366 1075630 F 265 90.94 656 reject_low 26 ALIGNMENT 0 YS2-8j15.p1k chr15 672 291 1088331 1088330 C 382 0.00 672 reject_low 12 ALIGNMENT 182 YS2-8j15.p1k chr12 290 28 1068703 1068967 C 263 90.11 672 reject_low 9 ALIGNMENT 0 YS2-8j15.q1k chr09 391 62 3286 3285 C 330 0.00 656 reject_low 36 ALIGNMENT 0 YS2-8j15.p1k chr05 672 291 573995 573994 C 382 0.00 672 reject_low 6 ALIGNMENT 0 YS2-8j15.p1k chr12 291 672 3114 3113 F 382 0.00 672 reject_low 3 ALIGNMENT 179 YS2-8j15.p1k chr08 290 28 559516 559780 C 263 89.73 672 reject_low 18 ALIGNMENT 187 YS2-8j15.q1k chr10 656 392 3004 3268 C 265 90.19 656 reject_low 37 ALIGNMENT 334 YS2-8j15.q1k chr12 28 394 464991 465350 F 367 98.09 656 reject_low 2 ALIGNMENT 0 YS2-8j15.p1k chr12 672 654 455855 455854 C 19 0.00 672 reject_low 1 ALIGNMENT 0 YS2-8j15.q1k chr05 62 391 573994 573993 F 330 0.00 656 reject_low 23 ALIGNMENT 0 YS2-8j15.q1k chr16 391 62 2807 2806 C 330 0.00 656 reject_low 30 ALIGNMENT 0 YS2-8j15.q1k chr12 395 656 465350 465349 F 262 0.00 656 reject_low 2 ALIGNMENT 182 YS2-8j15.p1k chr14 28 290 2633 2897 F 263 90.11 672 reject_low 11 ALIGNMENT 0 YS2-8j15.p1k chr12 672 654 464992 464991 C 19 0.00 672 accept 0 ALIGNMENT 0 YS2-8j15.p1k chr12 672 291 1068704 1068703 C 382 0.00 672 reject_low 9 ALIGNMENT 187 YS2-8j15.q1k chr09 656 392 3021 3285 C 265 90.19 656 reject_low 36 ALIGNMENT 0 YS2-8j15.p1k chr07 672 291 1088072 1088071 C 382 0.00 672 reject_low 7 ALIGNMENT 0 YS2-8j15.q1k chr02 391 62 3316 3315 C 330 0.00 656 reject_low 32 ALIGNMENT 0 YS2-8j15.p1k chr16 291 672 2806 2805 F 382 0.00 672 reject_low 13 ALIGNMENT 0 YS2-8j15.q1k chr12 62 391 1075366 1075365 F 330 0.00 656 reject_low 26 ALIGNMENT 193 YS2-8j15.q1k chr04 392 656 1529165 1529429 F 265 90.94 656 reject_low 22 ALIGNMENT 0 YS2-8j15.p1k chr06 291 672 2151 2150 F 382 0.00 672 reject_low 17 ALIGNMENT 187 YS2-8j15.q1k chr05 656 392 2697 2961 C 265 90.19 656 reject_low 35 ALIGNMENT 193 YS2-8j15.q1k chr16 392 656 945063 945327 F 265 90.94 656 reject_low 31 ALIGNMENT 193 YS2-8j15.q1k chr15 392 656 1088330 1088594 F 265 90.94 656 reject_low 29 ALIGNMENT 193 YS2-8j15.q1k chr07 392 656 1088071 1088335 F 265 90.94 656 reject_low 24 ALIGNMENT 0 YS2-8j15.q1k chr08 62 391 559516 559515 F 330 0.00 656 reject_low 34 ALIGNMENT 193 YS2-8j15.q1k chr12 656 392 8385 8649 C 265 90.94 656 reject_low 3 ALIGNMENT 179 YS2-8j15.p1k chr09 28 290 3021 3285 F 263 89.73 672 reject_low 19 ALIGNMENT 777 YS2-8j19.q1k chr14 918 39 336747 337615 C 880 97.50 1160 accept 0 ALIGNMENT 995 YS2-8j19.p1k chr14 31 1152 335256 336382 F 1122 96.17 1296 accept 0 ALIGNMENT 22 YS2-8j20.q1k chr04 1088 1044 871916 871959 C 45 86.67 1150 reject_low 27 ALIGNMENT 47 YS2-8j20.q1k chr03 1073 879 149594 149786 C 195 78.46 1150 reject_low 26 ALIGNMENT 0 YS2-8j20.q1k chr03 992 1043 168730 168784 F 52 0.00 1150 reject_low 30 ALIGNMENT 0 YS2-8j20.q1k chr03 62 857 124131 124130 F 796 0.00 1150 reject_low 8 ALIGNMENT 994 YS2-8j20.p1k chr04 1230 31 885243 886444 C 1200 95.17 1288 accept_chi 0 ALIGNMENT 138 YS2-8j20.q1k chr03 858 1132 124131 124404 F 275 86.18 1150 reject_low 8 ALIGNMENT 133 YS2-8j20.q1k chr04 1132 858 802958 803230 C 275 85.45 1150 reject_low 13 ALIGNMENT 40 YS2-8j20.q1k chr07 991 881 817278 817387 C 111 81.08 1150 reject_low 31 ALIGNMENT 0 YS2-8j20.q1k chr02 877 62 259888 259887 C 816 0.00 1150 reject_low 14 ALIGNMENT 118 YS2-8j20.q1k chr04 1132 878 1095820 1096079 C 255 85.10 1150 reject_low 19 ALIGNMENT 139 YS2-8j20.q1k chr07 878 1132 817418 817671 F 255 87.84 1150 reject_low 11 ALIGNMENT 47 YS2-8j20.q1k chr04 221 293 871077 871149 F 73 89.04 1150 reject_low 2 ALIGNMENT 23 YS2-8j20.q1k chr15 998 941 594702 594759 C 58 81.03 1150 reject_low 29 ALIGNMENT 0 YS2-8j20.q1k chr03 868 62 151838 151837 C 807 0.00 1150 reject_low 18 ALIGNMENT 151 YS2-8j20.q1k chr16 1132 854 560536 560813 C 279 87.46 1150 reject_low 4 ALIGNMENT 0 YS2-8j20.q1k chr04 294 859 871149 871148 F 566 0.00 1150 reject_low 2 ALIGNMENT 0 YS2-8j20.q1k chr13 62 857 362586 362585 F 796 0.00 1150 reject_low 7 ALIGNMENT 107 YS2-8j20.q1k chr12 858 1088 475975 476211 F 231 84.85 1150 reject_low 24 ALIGNMENT 138 YS2-8j20.q1k chr07 1132 858 931749 932022 C 275 86.18 1150 reject_low 9 ALIGNMENT 0 YS2-8j20.q1k chr01 62 857 160239 160238 F 796 0.00 1150 reject_low 22 ALIGNMENT 147 YS2-8j20.q1k chr14 858 1132 102192 102465 F 275 87.27 1150 reject_low 5 ALIGNMENT 107 YS2-8j20.q1k chr01 858 1088 165827 166063 F 231 84.85 1150 reject_low 23 ALIGNMENT 22 YS2-8j20.q1k chr07 1088 1044 817179 817222 C 45 86.67 1150 reject_low 31 ALIGNMENT 0 YS2-8j20.q1k chr15 940 62 594760 594759 C 879 0.00 1150 reject_low 29 ALIGNMENT 0 YS2-8j20.q1k chr12 62 857 475975 475974 F 796 0.00 1150 reject_low 24 ALIGNMENT 22 YS2-8j20.q1k chr10 1044 1088 203892 203935 F 45 86.67 1150 reject_low 28 ALIGNMENT 0 YS2-8j20.q1k chr10 857 62 204314 204313 C 796 0.00 1150 reject_low 16 ALIGNMENT 73 YS2-8j20.q1k chr03 858 991 168595 168729 F 134 87.31 1150 reject_low 30 ALIGNMENT 0 YS2-8j20.q1k chr13 877 62 184482 184481 C 816 0.00 1150 reject_low 15 ALIGNMENT 144 YS2-8j20.q1k chr13 858 1132 362586 362859 F 275 86.91 1150 reject_low 7 ALIGNMENT 0 YS2-8j20.q1k chr16 853 62 560814 560813 C 792 0.00 1150 reject_low 4 ALIGNMENT 0 YS2-8j20.q1k chr07 62 877 817418 817417 F 816 0.00 1150 reject_low 11 ALIGNMENT 0 YS2-8j20.q1k chr07 1043 992 817223 817277 C 52 0.00 1150 reject_low 31 ALIGNMENT 127 YS2-8j20.q1k chr03 1132 869 151575 151837 C 264 85.23 1150 reject_low 18 ALIGNMENT 0 YS2-8j20.q1k chr04 877 62 1096080 1096079 C 816 0.00 1150 reject_low 19 ALIGNMENT 0 YS2-8j20.q1k chr03 878 62 149787 149786 C 817 0.00 1150 reject_low 26 ALIGNMENT 0 YS2-8j20.q1k chr15 877 62 595133 595132 C 816 0.00 1150 reject_low 12 ALIGNMENT 0 YS2-8j20.q1k chr04 857 62 803231 803230 C 796 0.00 1150 reject_low 13 ALIGNMENT 0 YS2-8j20.q1k chr04 62 220 871077 871076 F 159 0.00 1150 reject_low 2 ALIGNMENT 0 YS2-8j20.q1k chr12 62 877 215101 215100 F 816 0.00 1150 reject_low 20 ALIGNMENT 107 YS2-8j20.q1k chr01 858 1088 160239 160475 F 231 84.85 1150 reject_low 22 ALIGNMENT 90 YS2-8j20.q1k chr03 915 1132 142804 143019 F 218 83.03 1150 reject_low 25 ALIGNMENT 0 YS2-8j20.q1k chr03 62 914 142804 142803 F 853 0.00 1150 reject_low 25 ALIGNMENT 0 YS2-8j20.q1k chr16 62 857 850625 850624 F 796 0.00 1150 reject_low 17 ALIGNMENT 22 YS2-8j20.q1k chr03 1044 1088 168785 168828 F 45 86.67 1150 reject_low 30 ALIGNMENT 0 YS2-8j20.q1k chr07 856 62 402295 402294 C 795 0.00 1150 reject_low 10 ALIGNMENT 0 YS2-8j20.q1k chr07 857 62 932023 932022 C 796 0.00 1150 reject_low 9 ALIGNMENT 0 YS2-8j20.q1k chr14 62 857 102192 102191 F 796 0.00 1150 reject_low 5 ALIGNMENT 150 YS2-8j20.q1k chr11 836 1132 457763 458056 F 297 86.20 1150 reject_low 3 ALIGNMENT 0 YS2-8j20.q1k chr07 880 62 817388 817387 C 819 0.00 1150 reject_low 31 ALIGNMENT 118 YS2-8j20.q1k chr12 878 1132 215101 215360 F 255 85.10 1150 reject_low 20 ALIGNMENT 129 YS2-8j20.q1k chr16 858 1132 850625 850904 F 275 85.09 1150 reject_low 17 ALIGNMENT 0 YS2-8j20.q1k chr10 62 1043 203892 203891 F 982 0.00 1150 reject_low 28 ALIGNMENT 136 YS2-8j20.q1k chr02 1132 878 259634 259887 C 255 87.45 1150 reject_low 14 ALIGNMENT 0 YS2-8j20.q1k chr02 857 62 226956 226955 C 796 0.00 1150 reject_low 6 ALIGNMENT 0 YS2-8j20.q1k chr11 62 835 457763 457762 F 774 0.00 1150 reject_low 3 ALIGNMENT 144 YS2-8j20.q1k chr02 1132 858 226682 226955 C 275 86.91 1150 reject_low 6 ALIGNMENT 139 YS2-8j20.q1k chr15 1132 878 594879 595132 C 255 87.84 1150 reject_low 12 ALIGNMENT 130 YS2-8j20.q1k chr10 1132 858 204040 204313 C 275 85.09 1150 reject_low 16 ALIGNMENT 0 YS2-8j20.q1k chr01 62 857 165827 165826 F 796 0.00 1150 reject_low 23 ALIGNMENT 0 YS2-8j20.q1k chr04 1043 62 871960 871959 C 982 0.00 1150 reject_low 27 ALIGNMENT 136 YS2-8j20.q1k chr13 1132 878 184228 184481 C 255 87.45 1150 reject_low 15 ALIGNMENT 0 YS2-8j20.q1k chr03 62 857 168595 168594 F 796 0.00 1150 reject_low 30 ALIGNMENT 118 YS2-8j20.q1k chr16 1132 878 844466 844725 C 255 85.10 1150 reject_low 21 ALIGNMENT 0 YS2-8j20.q1k chr16 877 62 844726 844725 C 816 0.00 1150 reject_low 21 ALIGNMENT 807 YS2-8j20.q1k chr04 29 923 870915 871810 F 895 98.32 1150 accept_chi 1 ALIGNMENT 136 YS2-8j20.q1k chr07 1132 857 402020 402294 C 276 85.87 1150 reject_low 10 ALIGNMENT 257 YS2-8j21.p1k vc_7 1 410 456 872 F 410 87.07 564 reject_vc 6 ALIGNMENT 0 YS2-8j21.q1k chr04 473 434 107394 107393 C 40 0.00 473 accept 0 ALIGNMENT 0 YS2-8j21.q1k vc_5 434 62 37 36 C 373 0.00 473 reject_low 13 ALIGNMENT 0 YS2-8j21.q1k vc_1 433 62 2512 2511 C 372 0.00 473 reject_low 8 ALIGNMENT 263 YS2-8j21.p1k vc_1 410 1 1333 1749 C 410 87.56 564 reject_vc 1 ALIGNMENT 386 YS2-8j21.q1k chr04 433 37 107393 107791 C 397 99.50 473 accept 0 ALIGNMENT 40 YS2-8j21.q1k vc_3 473 434 2472 2511 C 40 100.00 473 reject_low 9 ALIGNMENT 263 YS2-8j21.p1k vc_5 410 1 4253 4669 C 410 87.56 564 reject_vc 4 ALIGNMENT 38 YS2-8j21.q1k vc_7 436 473 13525 13562 F 38 100.00 473 reject_low 12 ALIGNMENT 0 YS2-8j21.q1k vc_5 434 62 5064 5063 C 373 0.00 473 reject_low 11 ALIGNMENT 0 YS2-8j21.q1k vc_7 62 435 13525 13524 F 374 0.00 473 reject_low 12 ALIGNMENT 263 YS2-8j21.p1k vc_2 410 1 1333 1749 C 410 87.56 564 reject_vc 2 ALIGNMENT 39 YS2-8j21.q1k vc_5 473 435 5025 5063 C 39 100.00 473 reject_low 11 ALIGNMENT 40 YS2-8j21.q1k vc_4 434 473 5832 5871 F 40 100.00 473 reject_low 10 ALIGNMENT 36 YS2-8j21.q1k vc_5 470 435 1 36 C 36 100.00 473 reject_low 13 ALIGNMENT 263 YS2-8j21.p1k vc_3 410 1 1333 1749 C 410 87.56 564 reject_vc 3 ALIGNMENT 257 YS2-8j21.p1k vc_7 1 410 13918 14334 F 410 87.07 564 reject_vc 7 ALIGNMENT 0 YS2-8j21.q1k vc_3 433 62 2512 2511 C 372 0.00 473 reject_low 9 ALIGNMENT 0 YS2-8j21.q1k vc_4 62 433 5832 5831 F 372 0.00 473 reject_low 10 ALIGNMENT 263 YS2-8j21.p1k vc_6 1 410 3712 4128 F 410 87.56 564 reject_vc 5 ALIGNMENT 40 YS2-8j21.q1k vc_1 473 434 2472 2511 C 40 100.00 473 reject_low 8 ALIGNMENT 230 YS2-8j23.p1k chr07 208 559 342466 342808 F 352 89.20 1010 accept 0 ALIGNMENT 313 YS2-8j24.p1k chr12 358 1 655800 656156 C 358 96.93 517 ambiguous_trans 14 ALIGNMENT 316 YS2-8j24.p1k chr07 358 1 816467 816823 C 358 97.21 517 ambiguous_trans 4 ALIGNMENT 313 YS2-8j24.p1k chr04 1 358 878887 879243 F 358 96.93 517 ambiguous_trans 10 ALIGNMENT 313 YS2-8j24.p1k chr07 1 358 562436 562792 F 358 96.93 517 ambiguous_trans 12 ALIGNMENT 241 YS2-8j24.p1k chr16 358 1 849387 849743 C 358 90.22 517 reject_low 21 ALIGNMENT 313 YS2-8j24.p1k chr02 358 1 34656 35012 C 358 96.93 517 ambiguous_trans 7 ALIGNMENT 313 YS2-8j24.p1k chr15 358 1 975297 975653 C 358 96.93 517 ambiguous_trans 17 ALIGNMENT 313 YS2-8j24.p1k chr15 1 358 704652 705008 F 358 96.93 517 ambiguous_trans 16 ALIGNMENT 316 YS2-8j24.p1k chr14 1 358 562621 562977 F 358 97.21 517 ambiguous_trans 6 ALIGNMENT 313 YS2-8j24.p1k chr04 358 1 1211666 1212022 C 358 96.93 517 ambiguous_trans 11 ALIGNMENT 316 YS2-8j24.p1k chr03 358 1 89825 90181 C 358 97.21 517 ambiguous_trans 0 ALIGNMENT 313 YS2-8j24.p1k chr04 358 1 876831 877187 C 358 96.93 517 ambiguous_trans 9 ALIGNMENT 316 YS2-8j24.p1k chr14 358 1 524118 524474 C 358 97.21 517 ambiguous_trans 5 ALIGNMENT 316 YS2-8j24.p1k chr04 1 358 646086 646442 F 358 97.21 517 ambiguous_trans 1 ALIGNMENT 313 YS2-8j24.p1k chr12 358 1 598119 598475 C 358 96.93 517 ambiguous_trans 13 ALIGNMENT 259 YS2-8j24.p1k chr10 358 1 477353 477709 C 358 91.90 517 ambiguous_trans 19 ALIGNMENT 313 YS2-8j24.p1k chr16 1 358 805230 805586 F 358 96.93 517 ambiguous_trans 18 ALIGNMENT 241 YS2-8j24.p1k chr13 358 1 189140 189496 C 358 90.22 517 reject_low 20 ALIGNMENT 316 YS2-8j24.p1k chr07 1 358 569332 569688 F 358 97.21 517 ambiguous_trans 3 ALIGNMENT 316 YS2-8j24.p1k chr06 358 1 142923 143279 C 358 97.21 517 ambiguous_trans 2 ALIGNMENT 313 YS2-8j24.p1k chr12 358 1 946204 946560 C 358 96.93 517 ambiguous_trans 15 ALIGNMENT 313 YS2-8j24.p1k chr04 1 358 514272 514628 F 358 96.93 517 ambiguous_trans 8 ALIGNMENT 205 YS2-8j24.p1k chr13 358 1 201307 201663 C 358 86.87 517 reject_low 23 ALIGNMENT 235 YS2-8j24.p1k chr16 1 358 851218 851574 F 358 89.94 517 reject_low 22 ALIGNMENT 938 YS2-8k03.q1k chr11 1173 40 102373 103512 C 1134 94.62 1179 accept 0 ALIGNMENT 764 YS2-8k04.q1k chr12 81 873 489754 490546 F 793 98.99 1236 reject_low 2 ALIGNMENT 1010 YS2-8k04.p1k chr12 1152 29 453274 454418 C 1124 97.42 1356 accept 0 ALIGNMENT 1010 YS2-8k04.p1k chr12 1152 29 462411 463555 C 1124 97.42 1356 accept 1 ALIGNMENT 1093 YS2-8k04.q1k chr12 38 1235 460881 462078 F 1198 97.66 1236 accept 1 ALIGNMENT 0 YS2-8k04.q1k chr12 62 80 489754 489753 F 19 0.00 1236 reject_low 2 ALIGNMENT 1093 YS2-8k04.q1k chr12 38 1235 451744 452941 F 1198 97.66 1236 accept 0 ALIGNMENT 0 YS2-8k05.q1k vc_1 343 62 2513 2512 C 282 0.00 384 reject_low 9 ALIGNMENT 41 YS2-8k05.q1k vc_4 344 384 5831 5871 F 41 100.00 384 reject_low 12 ALIGNMENT 0 YS2-8k05.q1k vc_4 62 343 5831 5830 F 282 0.00 384 reject_low 12 ALIGNMENT 266 YS2-8k05.p1k vc_5 944 391 4470 5025 C 554 83.03 1366 reject_vc 4 ALIGNMENT 0 YS2-8k05.p1k vc_2 390 272 2106 2105 C 119 0.00 1366 reject_vc 2 ALIGNMENT 185 YS2-8k05.p1k vc_4 391 743 5871 6223 F 353 84.42 1366 reject_vc 8 ALIGNMENT 0 YS2-8k05.q1k vc_5 345 62 37 36 C 284 0.00 384 reject_low 16 ALIGNMENT 138 YS2-8k05.p1k chr16 157 370 465758 465969 F 214 89.72 1366 accept_chi 7 ALIGNMENT 0 YS2-8k05.q1k vc_3 343 62 2513 2512 C 282 0.00 384 reject_low 11 ALIGNMENT 266 YS2-8k05.p1k vc_7 391 944 13562 14117 F 554 83.03 1366 reject_vc 6 ALIGNMENT 36 YS2-8k05.q1k vc_5 381 346 1 36 C 36 100.00 384 reject_low 16 ALIGNMENT 292 YS2-8k05.q1k chr16 343 37 465666 465972 C 307 100.00 384 accept_chi 0 ALIGNMENT 38 YS2-8k05.q1k vc_7 347 384 13525 13562 F 38 100.00 384 reject_low 15 ALIGNMENT 0 YS2-8k05.p1k vc_7 272 390 100 99 F 119 0.00 1366 reject_vc 5 ALIGNMENT 39 YS2-8k05.q1k vc_5 384 346 5025 5063 C 39 100.00 384 reject_low 13 ALIGNMENT 0 YS2-8k05.p1k vc_5 390 272 5026 5025 C 119 0.00 1366 reject_vc 4 ALIGNMENT 41 YS2-8k05.q1k vc_1 384 344 2472 2512 C 41 100.00 384 reject_low 9 ALIGNMENT 41 YS2-8k05.q1k vc_3 384 344 2472 2512 C 41 100.00 384 reject_low 11 ALIGNMENT 0 YS2-8k05.p1k vc_4 272 390 5871 5870 F 119 0.00 1366 reject_vc 8 ALIGNMENT 0 YS2-8k05.p1k vc_7 272 390 13562 13561 F 119 0.00 1366 reject_vc 6 ALIGNMENT 38 YS2-8k05.q1k vc_7 347 384 63 100 F 38 100.00 384 reject_low 14 ALIGNMENT 0 YS2-8k05.q1k vc_7 62 346 13525 13524 F 285 0.00 384 reject_low 15 ALIGNMENT 0 YS2-8k05.q1k vc_7 62 346 63 62 F 285 0.00 384 reject_low 14 ALIGNMENT 0 YS2-8k05.p1k vc_3 390 272 2106 2105 C 119 0.00 1366 reject_vc 3 ALIGNMENT 0 YS2-8k05.p1k vc_1 390 272 2106 2105 C 119 0.00 1366 reject_vc 1 ALIGNMENT 266 YS2-8k05.p1k vc_2 944 391 1550 2105 C 554 83.03 1366 reject_vc 2 ALIGNMENT 41 YS2-8k05.q1k vc_2 384 344 2105 2145 C 41 100.00 384 reject_low 10 ALIGNMENT 0 YS2-8k05.q1k chr16 384 344 465667 465666 C 41 0.00 384 accept_chi 0 ALIGNMENT 266 YS2-8k05.p1k vc_3 944 391 1550 2105 C 554 83.03 1366 reject_vc 3 ALIGNMENT 0 YS2-8k05.q1k vc_5 345 62 5064 5063 C 284 0.00 384 reject_low 13 ALIGNMENT 266 YS2-8k05.p1k vc_1 944 391 1550 2105 C 554 83.03 1366 reject_vc 1 ALIGNMENT 266 YS2-8k05.p1k vc_7 391 944 100 655 F 554 83.03 1366 reject_vc 5 ALIGNMENT 0 YS2-8k05.q1k vc_2 343 62 2146 2145 C 282 0.00 384 reject_low 10 ALIGNMENT 660 YS2-8k07.q1k chr04 937 41 101595 102491 C 897 92.20 1136 accept 0 ALIGNMENT 415 YS2-8k07.p1k chr04 67 890 98267 99092 F 824 84.71 1128 accept 0 ALIGNMENT 850 YS2-8k08.q1k chr04 53 1097 1381964 1383035 F 1045 95.50 1148 accept 0 ALIGNMENT 999 YS2-8k10.q1k chr09 38 1204 276019 277199 F 1167 95.72 1238 accept 0 ALIGNMENT 822 YS2-8k10.p1k chr09 962 29 277391 278341 C 934 97.43 1317 accept 0 ALIGNMENT 929 YS2-8k11.q1k chr07 1134 38 60483 61584 C 1097 95.90 1246 accept 0 ALIGNMENT 1042 YS2-8k11.p1k chr07 30 1215 56852 58047 F 1186 95.95 1352 accept 0 ALIGNMENT 858 YS2-8k14.q1k chr16 1182 39 630619 631750 C 1144 92.92 1230 accept 0 ALIGNMENT 977 YS2-8k14.p1k chr16 29 1160 626995 628138 F 1132 95.94 1292 accept 0 ALIGNMENT 0 YS2-8k14.q1k chr05 512 62 132588 132587 C 451 0.00 1230 reject_low 1 ALIGNMENT 0 YS2-8k14.q1k chr05 899 542 132560 132559 C 358 0.00 1230 reject_low 1 ALIGNMENT 21 YS2-8k14.q1k chr05 541 513 132559 132587 C 29 96.55 1230 reject_low 1 ALIGNMENT 0 YS2-8k15.p1k chr04 92 311 169823 169822 F 220 0.00 1283 accept 0 ALIGNMENT 23 YS2-8k15.p1k chr04 312 349 169823 169860 F 38 97.37 1283 accept 0 ALIGNMENT 0 YS2-8k15.p1k chr04 350 799 169860 169859 F 450 0.00 1283 accept 0 ALIGNMENT 0 YS2-8k16.p1k chr04 350 895 169860 169859 F 546 0.00 1196 accept 0 ALIGNMENT 23 YS2-8k16.p1k chr04 312 349 169823 169860 F 38 97.37 1196 accept 0 ALIGNMENT 0 YS2-8k16.p1k chr04 62 311 169823 169822 F 250 0.00 1196 accept 0 ALIGNMENT 0 YS2-8k17.q1k vc_7 62 228 13525 13524 F 167 0.00 266 reject_low 7 ALIGNMENT 0 YS2-8k17.q1k vc_5 227 62 5064 5063 C 166 0.00 266 reject_low 6 ALIGNMENT 0 YS2-8k17.q1k vc_4 62 224 5830 5829 F 163 0.00 266 reject_low 5 ALIGNMENT 172 YS2-8k17.q1k chrm 38 225 36686 36873 F 188 100.00 266 accept_chi 0 ALIGNMENT 42 YS2-8k17.q1k vc_1 266 225 2472 2513 C 42 100.00 266 reject_low 2 ALIGNMENT 42 YS2-8k17.q1k vc_3 266 225 2472 2513 C 42 100.00 266 reject_low 4 ALIGNMENT 0 YS2-8k17.q1k vc_5 227 62 37 36 C 166 0.00 266 reject_low 8 ALIGNMENT 39 YS2-8k17.q1k vc_5 266 228 5025 5063 C 39 100.00 266 reject_low 6 ALIGNMENT 0 YS2-8k17.q1k vc_3 224 62 2514 2513 C 163 0.00 266 reject_low 4 ALIGNMENT 0 YS2-8k17.q1k chrm 226 266 36873 36872 F 41 0.00 266 accept_chi 0 ALIGNMENT 0 YS2-8k17.q1k vc_2 224 62 2147 2146 C 163 0.00 266 reject_low 3 ALIGNMENT 42 YS2-8k17.q1k vc_4 225 266 5830 5871 F 42 100.00 266 reject_low 5 ALIGNMENT 0 YS2-8k17.q1k vc_1 224 62 2514 2513 C 163 0.00 266 reject_low 2 ALIGNMENT 38 YS2-8k17.q1k vc_7 229 266 13525 13562 F 38 100.00 266 reject_low 7 ALIGNMENT 0 YS2-8k17.p1k chrm 238 221 36687 36686 C 18 0.00 238 accept_chi 1 ALIGNMENT 166 YS2-8k17.p1k chrm 220 33 36686 36873 C 188 98.94 238 accept_chi 1 ALIGNMENT 36 YS2-8k17.q1k vc_5 263 228 1 36 C 36 100.00 266 reject_low 8 ALIGNMENT 42 YS2-8k17.q1k vc_2 266 225 2105 2146 C 42 100.00 266 reject_low 3 ALIGNMENT 136 YS2-8k19.p1k chr13 599 1070 359791 360261 F 472 77.75 1222 reject_low 30 ALIGNMENT 136 YS2-8k19.p1k chr07 599 1070 820185 820655 F 472 77.75 1222 reject_low 29 ALIGNMENT 0 YS2-8k19.q1k chr12 88 62 218849 218848 C 27 0.00 1208 reject_low 23 ALIGNMENT 928 YS2-8k19.p1k chr04 1161 33 874363 875497 C 1129 95.13 1222 reject_low 8 ALIGNMENT 0 YS2-8k19.q1k chr15 62 88 596973 596972 F 27 0.00 1208 reject_low 21 ALIGNMENT 0 YS2-8k19.p1k chr10 771 62 480921 480920 C 710 0.00 1222 reject_low 20 ALIGNMENT 0 YS2-8k19.p1k chr05 62 692 446279 446278 F 631 0.00 1222 reject_low 26 ALIGNMENT 964 YS2-8k19.p1k chr03 1161 33 87357 88491 C 1129 96.19 1222 ambiguous_trans 3 ALIGNMENT 952 YS2-8k19.p1k chr06 1161 33 140455 141589 C 1129 95.84 1222 ambiguous_trans 5 ALIGNMENT 966 YS2-8k19.q1k chr04 40 1195 873907 875068 F 1156 95.33 1208 reject_low 8 ALIGNMENT 0 YS2-8k19.p1k chr16 62 692 807524 807523 F 631 0.00 1222 reject_low 16 ALIGNMENT 1012 YS2-8k19.p1k chr02 1161 33 32188 33322 C 1129 97.61 1222 ambiguous_trans 0 ALIGNMENT 0 YS2-8k19.p1k chr16 598 62 847544 847543 C 537 0.00 1222 reject_low 18 ALIGNMENT 0 YS2-8k19.q1k chr07 88 62 565611 565610 C 27 0.00 1208 reject_low 22 ALIGNMENT 299 YS2-8k19.q1k chr12 891 89 218046 218848 C 803 79.83 1208 reject_low 23 ALIGNMENT 299 YS2-8k19.q1k chr10 89 1064 474535 475509 F 976 77.97 1208 reject_low 13 ALIGNMENT 297 YS2-8k19.q1k chr13 89 1047 186322 187279 F 959 78.00 1208 reject_low 15 ALIGNMENT 0 YS2-8k19.p1k chr16 62 598 853418 853417 F 537 0.00 1222 reject_low 19 ALIGNMENT 0 YS2-8k19.p1k chr05 62 598 495284 495283 F 537 0.00 1222 reject_low 28 ALIGNMENT 299 YS2-8k19.q1k chr07 891 89 564808 565610 C 803 79.83 1208 reject_low 22 ALIGNMENT 0 YS2-8k19.q1k chr16 88 62 808405 808404 C 27 0.00 1208 reject_low 16 ALIGNMENT 0 YS2-8k19.q1k chr16 62 88 846566 846565 F 27 0.00 1208 reject_low 18 ALIGNMENT 139 YS2-8k19.p1k chr13 599 1070 375489 375959 F 472 77.97 1222 reject_low 25 ALIGNMENT 928 YS2-8k19.p1k chr15 33 1161 706342 707476 F 1129 95.13 1222 reject_low 9 ALIGNMENT 0 YS2-8k19.p1k chr02 598 62 224169 224168 C 537 0.00 1222 reject_low 14 ALIGNMENT 302 YS2-8k19.q1k chr15 89 891 596973 597775 F 803 79.95 1208 reject_low 21 ALIGNMENT 0 YS2-8k19.q1k chr10 62 88 480119 480118 F 27 0.00 1208 reject_low 20 ALIGNMENT 302 YS2-8k19.q1k chr16 891 89 807602 808404 C 803 79.95 1208 reject_low 16 ALIGNMENT 931 YS2-8k19.p1k chr14 33 1161 564311 565445 F 1129 95.22 1222 reject_low 7 ALIGNMENT 1010 YS2-8k19.q1k chr02 40 1196 31732 32894 F 1157 96.72 1208 ambiguous_trans 0 ALIGNMENT 982 YS2-8k19.q1k chr06 40 1195 139999 141160 F 1156 95.93 1208 ambiguous_trans 5 ALIGNMENT 142 YS2-8k19.p1k chr10 1070 599 475039 475509 C 472 78.18 1222 reject_low 13 ALIGNMENT 299 YS2-8k19.q1k chr12 891 89 478939 479741 C 803 79.83 1208 reject_low 24 ALIGNMENT 139 YS2-8k19.p1k chr13 1070 599 186826 187296 C 472 77.97 1222 reject_low 15 ALIGNMENT 0 YS2-8k19.p1k chr10 598 62 475510 475509 C 537 0.00 1222 reject_low 13 ALIGNMENT 988 YS2-8k19.q1k chr04 1195 40 516391 517552 C 1156 96.02 1208 ambiguous_trans 2 ALIGNMENT 125 YS2-8k19.p1k chr10 1070 772 480623 480920 C 299 81.61 1222 reject_low 20 ALIGNMENT 983 YS2-8k19.q1k chr03 40 1196 86901 88063 F 1157 95.94 1208 ambiguous_trans 3 ALIGNMENT 965 YS2-8k19.q1k chr07 1195 40 571451 572613 C 1156 95.24 1208 reject_low 10 ALIGNMENT 0 YS2-8k19.q1k chr12 88 62 479742 479741 C 27 0.00 1208 reject_low 24 ALIGNMENT 922 YS2-8k19.p1k chr12 33 1161 978015 979149 F 1129 94.95 1222 reject_low 11 ALIGNMENT 982 YS2-8k19.p1k chr12 1161 33 943736 944870 C 1129 96.72 1222 ambiguous_trans 1 ALIGNMENT 0 YS2-8k19.p1k chr13 62 598 375489 375488 F 537 0.00 1222 reject_low 25 ALIGNMENT 136 YS2-8k19.p1k chr05 599 1070 495284 495754 F 472 77.75 1222 reject_low 28 ALIGNMENT 0 YS2-8k19.q1k chr16 88 62 854393 854392 C 27 0.00 1208 reject_low 19 ALIGNMENT 0 YS2-8k19.p1k chr13 692 62 199370 199369 C 631 0.00 1222 reject_low 17 ALIGNMENT 0 YS2-8k19.p1k chr13 598 62 187297 187296 C 537 0.00 1222 reject_low 15 ALIGNMENT 0 YS2-8k19.q1k chr10 62 88 474535 474534 F 27 0.00 1208 reject_low 13 ALIGNMENT 136 YS2-8k19.p1k chr16 1070 599 847073 847543 C 472 77.75 1222 reject_low 18 ALIGNMENT 970 YS2-8k19.p1k chr04 33 1161 515962 517096 F 1129 96.37 1222 ambiguous_trans 2 ALIGNMENT 969 YS2-8k19.q1k chr12 1195 40 978444 979605 C 1156 95.33 1208 reject_low 11 ALIGNMENT 991 YS2-8k19.q1k chr04 40 1195 983256 984417 F 1156 96.19 1208 ambiguous_trans 4 ALIGNMENT 963 YS2-8k19.q1k chr15 40 1195 972373 973534 F 1156 95.24 1208 reject_low 12 ALIGNMENT 298 YS2-8k19.q1k chr02 89 1064 223194 224168 F 976 77.77 1208 reject_low 14 ALIGNMENT 0 YS2-8k19.q1k chr02 62 88 223194 223193 F 27 0.00 1208 reject_low 14 ALIGNMENT 140 YS2-8k19.p1k chr13 1070 693 198993 199369 C 378 80.16 1222 reject_low 17 ALIGNMENT 140 YS2-8k19.p1k chr14 1070 693 521822 522198 C 378 80.16 1222 reject_low 27 ALIGNMENT 966 YS2-8k19.q1k chr14 1195 40 564740 565901 C 1156 95.24 1208 reject_low 7 ALIGNMENT 297 YS2-8k19.q1k chr16 89 891 846566 847371 F 803 79.95 1208 reject_low 18 ALIGNMENT 958 YS2-8k19.p1k chr04 1161 33 983712 984846 C 1129 96.01 1222 ambiguous_trans 4 ALIGNMENT 140 YS2-8k19.p1k chr16 693 1070 807524 807900 F 378 80.16 1222 reject_low 16 ALIGNMENT 0 YS2-8k19.q1k chr13 62 130 198531 198530 F 69 0.00 1208 reject_low 17 ALIGNMENT 0 YS2-8k19.p1k chr14 692 62 522199 522198 C 631 0.00 1222 reject_low 27 ALIGNMENT 982 YS2-8k19.q1k chr07 40 1195 813543 814704 F 1156 95.93 1208 ambiguous_trans 6 ALIGNMENT 927 YS2-8k19.p1k chr07 33 1161 571022 572157 F 1129 95.13 1222 reject_low 10 ALIGNMENT 966 YS2-8k19.q1k chr15 1195 40 706771 707932 C 1156 95.33 1208 reject_low 9 ALIGNMENT 998 YS2-8k19.q1k chr12 40 1196 943280 944442 F 1157 96.37 1208 ambiguous_trans 1 ALIGNMENT 299 YS2-8k19.q1k chr13 131 891 198531 199291 F 761 80.55 1208 reject_low 17 ALIGNMENT 136 YS2-8k19.p1k chr16 599 1070 853418 853888 F 472 77.75 1222 reject_low 19 ALIGNMENT 0 YS2-8k19.p1k chr13 62 598 359791 359790 F 537 0.00 1222 reject_low 30 ALIGNMENT 293 YS2-8k19.q1k chr16 891 89 853590 854392 C 803 79.58 1208 reject_low 19 ALIGNMENT 952 YS2-8k19.p1k chr07 1161 33 813999 815133 C 1129 95.84 1222 ambiguous_trans 6 ALIGNMENT 0 YS2-8k19.p1k chr07 62 598 820185 820184 F 537 0.00 1222 reject_low 29 ALIGNMENT 302 YS2-8k19.q1k chr10 89 891 480119 480921 F 803 79.95 1208 reject_low 20 ALIGNMENT 0 YS2-8k19.q1k chr13 62 88 186322 186321 F 27 0.00 1208 reject_low 15 ALIGNMENT 142 YS2-8k19.p1k chr02 1070 599 223698 224168 C 472 78.18 1222 reject_low 14 ALIGNMENT 922 YS2-8k19.p1k chr15 1161 33 972829 973963 C 1129 94.95 1222 reject_low 12 ALIGNMENT 140 YS2-8k19.p1k chr05 693 1070 446279 446655 F 378 80.16 1222 reject_low 26 ALIGNMENT 40 YS2-8k21.q1k vc_3 225 186 2472 2511 C 40 100.00 225 reject_low 3 ALIGNMENT 0 YS2-8k21.q1k vc_7 62 187 13525 13524 F 126 0.00 225 reject_low 6 ALIGNMENT 38 YS2-8k21.q1k vc_7 188 225 13525 13562 F 38 100.00 225 reject_low 6 ALIGNMENT 40 YS2-8k21.q1k vc_1 225 186 2472 2511 C 40 100.00 225 reject_low 2 ALIGNMENT 36 YS2-8k21.q1k vc_5 222 187 1 36 C 36 100.00 225 reject_low 7 ALIGNMENT 0 YS2-8k21.q1k vc_5 186 62 5064 5063 C 125 0.00 225 reject_low 5 ALIGNMENT 39 YS2-8k21.q1k vc_5 225 187 5025 5063 C 39 100.00 225 reject_low 5 ALIGNMENT 0 YS2-8k21.q1k vc_1 185 62 2512 2511 C 124 0.00 225 reject_low 2 ALIGNMENT 0 YS2-8k21.q1k vc_3 185 62 2512 2511 C 124 0.00 225 reject_low 3 ALIGNMENT 0 YS2-8k21.q1k vc_4 62 185 5832 5831 F 124 0.00 225 reject_low 4 ALIGNMENT 0 YS2-8k21.q1k vc_5 186 62 37 36 C 125 0.00 225 reject_low 7 ALIGNMENT 148 YS2-8k21.p1k chr02 30 191 376245 376406 F 162 98.77 208 accept_chi 0 ALIGNMENT 40 YS2-8k21.q1k vc_4 186 225 5832 5871 F 40 100.00 225 reject_low 4 ALIGNMENT 0 YS2-8k21.p1k chr02 192 208 376406 376405 F 17 0.00 208 accept_chi 0 ALIGNMENT 140 YS2-8k21.q1k chr02 185 29 376245 376403 C 157 98.09 225 accept_chi 1 ALIGNMENT 0 YS2-8k21.q1k chr02 225 186 376246 376245 C 40 0.00 225 accept_chi 1 ALIGNMENT 1023 YS2-8k22.p1k chr02 1207 34 229823 230993 C 1174 96.59 1212 accept_trans 0 ALIGNMENT 987 YS2-8k22.q1k chr02 39 1145 219559 220664 F 1107 97.29 1145 accept_trans 0 ALIGNMENT 0 YS2-8k23.q1k chr09 609 62 246493 246492 C 548 0.00 1082 reject_low 21 ALIGNMENT 0 YS2-8k23.q1k chr07 875 648 535452 535451 C 228 0.00 1082 reject_low 3 ALIGNMENT 31 YS2-8k23.q1k chr04 645 610 803137 803172 C 36 97.22 1082 reject_low 8 ALIGNMENT 0 YS2-8k23.q1k chr07 609 62 536044 536043 C 548 0.00 1082 reject_low 10 ALIGNMENT 0 YS2-8k23.q1k chr12 646 875 215174 215173 F 230 0.00 1082 reject_low 14 ALIGNMENT 0 YS2-8k23.q1k chr14 875 797 561998 561997 C 79 0.00 1082 reject_low 1 ALIGNMENT 0 YS2-8k23.q1k chr13 609 62 184444 184443 C 548 0.00 1082 reject_low 15 ALIGNMENT 0 YS2-8k23.q1k chr15 875 646 595060 595059 C 230 0.00 1082 reject_low 19 ALIGNMENT 0 YS2-8k23.q1k chr13 875 646 184409 184408 C 230 0.00 1082 reject_low 15 ALIGNMENT 0 YS2-8k23.q1k chr13 646 875 372789 372788 F 230 0.00 1082 reject_low 18 ALIGNMENT 0 YS2-8k23.q1k chr03 875 646 90678 90677 C 230 0.00 1082 reject_low 24 ALIGNMENT 20 YS2-8k23.q1k chr03 645 610 90677 90711 C 36 88.89 1082 reject_low 24 ALIGNMENT 772 YS2-8k23.q1k chr12 869 53 221006 221822 C 817 99.88 1082|3,0 accept 0 ALIGNMENT 0 YS2-8k23.q1k chr12 609 62 599007 599006 C 548 0.00 1082 reject_low 5 ALIGNMENT 0 YS2-8k23.q1k chr10 609 62 472657 472656 C 548 0.00 1082 reject_low 12 ALIGNMENT 0 YS2-8k23.q1k chr07 609 62 535489 535488 C 548 0.00 1082 reject_low 3 ALIGNMENT 0 YS2-8k23.q1k chr13 609 62 190026 190025 C 548 0.00 1082 reject_low 16 ALIGNMENT 0 YS2-8k23.q1k chr12 875 648 598970 598969 C 228 0.00 1082 reject_low 5 ALIGNMENT 20 YS2-8k23.q1k chr05 645 610 488069 488103 C 36 88.89 1082 reject_low 26 ALIGNMENT 0 YS2-8k23.q1k chr12 866 867 215078 221008 C 0 0.00 1082 accept 0 ALIGNMENT 20 YS2-8k23.q1k chr03 645 610 85050 85084 C 36 88.89 1082 reject_low 23 ALIGNMENT 20 YS2-8k23.q1k chr03 645 610 84534 84568 C 36 88.89 1082 reject_low 22 ALIGNMENT 0 YS2-8k23.q1k chr14 756 62 562035 562034 C 695 0.00 1082 reject_low 1 ALIGNMENT 0 YS2-8k23.q1k chr01 62 609 160297 160296 F 548 0.00 1082 reject_low 7 ALIGNMENT 31 YS2-8k23.q1k chr15 645 610 595059 595094 C 36 97.22 1082 reject_low 19 ALIGNMENT 32 YS2-8k23.q1k chr07 647 610 535451 535488 C 38 97.37 1082 reject_low 3 ALIGNMENT 0 YS2-8k23.q1k chr07 875 646 536009 536008 C 230 0.00 1082 reject_low 10 ALIGNMENT 0 YS2-8k23.q1k chr10 609 62 483829 483828 C 548 0.00 1082 reject_low 13 ALIGNMENT 928 YS2-8k23.p1k chr12 33 1130 209961 211068 F 1098 95.72 1131 accept 0 ALIGNMENT 22 YS2-8k23.q1k chr09 645 610 246457 246492 C 36 88.89 1082 reject_low 21 ALIGNMENT 32 YS2-8k23.q1k chr04 647 610 1212516 1212553 C 38 97.37 1082 reject_low 2 ALIGNMENT 32 YS2-8k23.q1k chr13 610 647 362644 362681 F 38 97.37 1082 reject_low 6 ALIGNMENT 0 YS2-8k23.q1k chr05 646 875 449073 449072 F 230 0.00 1082 reject_low 9 ALIGNMENT 32 YS2-8k23.q1k chr10 647 610 478203 478240 C 38 97.37 1082 reject_low 4 ALIGNMENT 0 YS2-8k23.q1k chr13 875 646 196576 196575 C 230 0.00 1082 reject_low 17 ALIGNMENT 0 YS2-8k23.q1k chr05 875 646 488070 488069 C 230 0.00 1082 reject_low 26 ALIGNMENT 0 YS2-8k23.q1k chr10 875 646 472622 472621 C 230 0.00 1082 reject_low 12 ALIGNMENT 31 YS2-8k23.q1k chr12 610 645 215139 215174 F 36 97.22 1082 reject_low 14 ALIGNMENT 31 YS2-8k23.q1k chr16 645 610 62282 62317 C 36 97.22 1082 reject_low 20 ALIGNMENT 0 YS2-8k23.q1k chr13 62 609 372754 372753 F 548 0.00 1082 reject_low 18 ALIGNMENT 31 YS2-8k23.q1k chr13 645 610 189990 190025 C 36 97.22 1082 reject_low 16 ALIGNMENT 0 YS2-8k23.q1k chr08 875 646 133910 133909 C 230 0.00 1082 reject_low 11 ALIGNMENT 0 YS2-8k23.q1k chr04 609 62 1212554 1212553 C 548 0.00 1082 reject_low 2 ALIGNMENT 31 YS2-8k23.q1k chr10 645 610 483793 483828 C 36 97.22 1082 reject_low 13 ALIGNMENT 31 YS2-8k23.q1k chr13 645 610 184408 184443 C 36 97.22 1082 reject_low 15 ALIGNMENT 0 YS2-8k23.q1k chr14 62 609 562091 562090 F 548 0.00 1082 reject_low 27 ALIGNMENT 31 YS2-8k23.q1k chr07 645 610 536008 536043 C 36 97.22 1082 reject_low 10 ALIGNMENT 0 YS2-8k23.q1k chr03 875 646 85051 85050 C 230 0.00 1082 reject_low 23 ALIGNMENT 31 YS2-8k23.q1k chr08 645 610 133909 133944 C 36 97.22 1082 reject_low 11 ALIGNMENT 0 YS2-8k23.q1k chr04 609 62 520745 520744 C 548 0.00 1082 reject_low 25 ALIGNMENT 0 YS2-8k23.q1k chr09 875 646 246458 246457 C 230 0.00 1082 reject_low 21 ALIGNMENT 0 YS2-8k23.q1k chr04 609 62 803173 803172 C 548 0.00 1082 reject_low 8 ALIGNMENT 0 YS2-8k23.q1k chr10 875 648 478204 478203 C 228 0.00 1082 reject_low 4 ALIGNMENT 0 YS2-8k23.q1k chr13 648 875 362681 362680 F 228 0.00 1082 reject_low 6 ALIGNMENT 0 YS2-8k23.q1k chr03 609 62 90712 90711 C 548 0.00 1082 reject_low 24 ALIGNMENT 0 YS2-8k23.q1k chr05 62 609 449038 449037 F 548 0.00 1082 reject_low 9 ALIGNMENT 31 YS2-8k23.q1k chr05 610 645 449038 449073 F 36 97.22 1082 reject_low 9 ALIGNMENT 0 YS2-8k23.q1k chr03 875 646 84535 84534 C 230 0.00 1082 reject_low 22 ALIGNMENT 26 YS2-8k23.q1k chr14 796 757 561997 562034 C 40 92.50 1082 reject_low 1 ALIGNMENT 32 YS2-8k23.q1k chr12 647 610 598969 599006 C 38 97.37 1082 reject_low 5 ALIGNMENT 31 YS2-8k23.q1k chr01 610 645 160297 160332 F 36 97.22 1082 reject_low 7 ALIGNMENT 31 YS2-8k23.q1k chr10 645 610 472621 472656 C 36 97.22 1082 reject_low 12 ALIGNMENT 0 YS2-8k23.q1k chr14 646 875 562125 562124 F 230 0.00 1082 reject_low 27 ALIGNMENT 0 YS2-8k23.q1k chr05 609 62 488104 488103 C 548 0.00 1082 reject_low 26 ALIGNMENT 0 YS2-8k23.q1k chr16 875 646 62283 62282 C 230 0.00 1082 reject_low 20 ALIGNMENT 0 YS2-8k23.q1k chr13 62 609 362644 362643 F 548 0.00 1082 reject_low 6 ALIGNMENT 0 YS2-8k23.q1k chr04 875 646 803138 803137 C 230 0.00 1082 reject_low 8 ALIGNMENT 0 YS2-8k23.q1k chr04 875 648 1212517 1212516 C 228 0.00 1082 reject_low 2 ALIGNMENT 0 YS2-8k23.q1k chr16 609 62 62318 62317 C 548 0.00 1082 reject_low 20 ALIGNMENT 0 YS2-8k23.q1k chr13 609 62 196611 196610 C 548 0.00 1082 reject_low 17 ALIGNMENT 0 YS2-8k23.q1k chr10 609 62 478241 478240 C 548 0.00 1082 reject_low 4 ALIGNMENT 0 YS2-8k23.q1k chr15 609 62 595095 595094 C 548 0.00 1082 reject_low 19 ALIGNMENT 20 YS2-8k23.q1k chr14 610 645 562091 562125 F 36 88.89 1082 reject_low 27 ALIGNMENT 20 YS2-8k23.q1k chr04 645 610 520710 520744 C 36 88.89 1082 reject_low 25 ALIGNMENT 114 YS2-8k23.q1k chr12 1080 864 214874 215080 C 217 86.64 1082|0,3 accept 0 ALIGNMENT 0 YS2-8k23.q1k chr03 609 62 84569 84568 C 548 0.00 1082 reject_low 22 ALIGNMENT 31 YS2-8k23.q1k chr13 645 610 196575 196610 C 36 97.22 1082 reject_low 17 ALIGNMENT 0 YS2-8k23.q1k chr01 646 875 160332 160331 F 230 0.00 1082 reject_low 7 ALIGNMENT 0 YS2-8k23.q1k chr12 62 609 215139 215138 F 548 0.00 1082 reject_low 14 ALIGNMENT 0 YS2-8k23.q1k chr04 875 646 520711 520710 C 230 0.00 1082 reject_low 25 ALIGNMENT 0 YS2-8k23.q1k chr10 875 646 483794 483793 C 230 0.00 1082 reject_low 13 ALIGNMENT 31 YS2-8k23.q1k chr13 610 645 372754 372789 F 36 97.22 1082 reject_low 18 ALIGNMENT 0 YS2-8k23.q1k chr13 875 646 189991 189990 C 230 0.00 1082 reject_low 16 ALIGNMENT 0 YS2-8k23.q1k chr03 609 62 85085 85084 C 548 0.00 1082 reject_low 23 ALIGNMENT 0 YS2-8k23.q1k chr08 609 62 133945 133944 C 548 0.00 1082 reject_low 11 ALIGNMENT 0 YS2-8k24.q1k chr16 62 392 744284 744283 F 331 0.00 1204 reject_low 3 ALIGNMENT 276 YS2-8k24.q1k chr07 35 437 661402 661799 F 403 91.56 1204 accept 0 ALIGNMENT 36 YS2-8k24.q1k chr16 393 437 744284 744328 F 45 93.33 1204 reject_low 3 ALIGNMENT 36 YS2-8k24.q1k chr07 393 437 1004224 1004268 F 45 93.33 1204 reject_low 2 ALIGNMENT 893 YS2-8k24.p1k chr07 1020 27 662190 663191 C 994 97.38 1149 accept 0 ALIGNMENT 0 YS2-8k24.q1k chr07 62 392 1004224 1004223 F 331 0.00 1204 reject_low 2 ALIGNMENT 39 YS2-8k24.q1k chr08 387 437 466986 467036 F 51 92.16 1204 reject_low 1 ALIGNMENT 0 YS2-8k24.q1k chr08 62 386 466986 466985 F 325 0.00 1204 reject_low 1 ALIGNMENT 483 YS2-8l01.p1k vc_6 1 589 3712 4295 F 589 95.25 854 reject_vc 6 ALIGNMENT 503 YS2-8l01.p1k vc_7 1 759 13918 14658 F 759 90.78 854 reject_vc 5 ALIGNMENT 515 YS2-8l01.p1k vc_3 782 1 987 1749 C 782 90.66 854 reject_vc 3 ALIGNMENT 515 YS2-8l01.p1k vc_1 782 1 987 1749 C 782 90.66 854 reject_vc 1 ALIGNMENT 0 YS2-8l01.p1k vc_1 556 62 9172 9171 C 495 0.00 854 reject_low 7 ALIGNMENT 0 YS2-8l01.p1k vc_2 556 62 8805 8804 C 495 0.00 854 reject_low 8 ALIGNMENT 518 YS2-8l01.p1k vc_5 782 1 3907 4669 C 782 90.79 854 reject_vc 0 ALIGNMENT 509 YS2-8l01.p1k vc_7 1 782 456 1218 F 782 90.41 854 reject_vc 4 ALIGNMENT 57 YS2-8l01.p1k vc_1 782 557 8961 9171 C 226 79.65 854 reject_low 7 ALIGNMENT 57 YS2-8l01.p1k vc_3 782 557 8232 8442 C 226 79.65 854 reject_low 9 ALIGNMENT 0 YS2-8l01.p1k vc_3 556 62 8443 8442 C 495 0.00 854 reject_low 9 ALIGNMENT 57 YS2-8l01.p1k vc_2 782 557 8594 8804 C 226 79.65 854 reject_low 8 ALIGNMENT 515 YS2-8l01.p1k vc_2 782 1 987 1749 C 782 90.66 854 reject_vc 2 ALIGNMENT 968 YS2-8l02.p1k chr12 30 1092 456016 457095 F 1063 97.27 1331 accept 0 ALIGNMENT 0 YS2-8l02.q1k chr12 436 62 489482 489481 C 375 0.00 1183 reject_low 2 ALIGNMENT 0 YS2-8l02.q1k chr12 823 571 489349 489348 C 253 0.00 1183 reject_low 2 ALIGNMENT 0 YS2-8l02.q1k chr12 451 62 468931 468930 C 390 0.00 1183 reject_low 1 ALIGNMENT 128 YS2-8l02.q1k chr12 570 437 489348 489481 C 134 98.51 1183 reject_low 2 ALIGNMENT 0 YS2-8l02.q1k chr12 823 571 472465 472464 C 253 0.00 1183 reject_low 4 ALIGNMENT 0 YS2-8l02.q1k chr06 62 829 31622 31621 F 768 0.00 1183 reject_low 3 ALIGNMENT 0 YS2-8l02.q1k chr12 451 62 472583 472582 C 390 0.00 1183 reject_low 4 ALIGNMENT 90 YS2-8l02.q1k chr06 830 938 31622 31729 F 109 97.25 1183 reject_low 3 ALIGNMENT 0 YS2-8l02.q1k chr12 451 62 485815 485814 C 390 0.00 1183 reject_low 6 ALIGNMENT 566 YS2-8l02.q1k chr12 1147 452 468242 468930 C 696 95.55 1183 reject_low 1 ALIGNMENT 0 YS2-8l02.q1k chr12 451 62 482163 482162 C 390 0.00 1183 reject_low 5 ALIGNMENT 0 YS2-8l02.q1k chr12 823 571 485697 485696 C 253 0.00 1183 reject_low 6 ALIGNMENT 119 YS2-8l02.q1k chr12 570 452 472464 472582 C 119 100.00 1183 reject_low 4 ALIGNMENT 119 YS2-8l02.q1k chr12 570 452 485696 485814 C 119 100.00 1183 reject_low 6 ALIGNMENT 119 YS2-8l02.q1k chr12 570 452 482044 482162 C 119 100.00 1183 reject_low 5 ALIGNMENT 0 YS2-8l02.q1k chr12 823 571 482045 482044 C 253 0.00 1183 reject_low 5 ALIGNMENT 968 YS2-8l02.p1k chr12 30 1092 465153 466232 F 1063 97.27 1331 reject_low 1 ALIGNMENT 880 YS2-8l02.q1k chr12 1147 55 459105 460202 C 1093 95.43 1183 accept 0 ALIGNMENT 0 YS2-8l03.q1k vc_4 62 318 5831 5830 F 257 0.00 359 reject_low 5 ALIGNMENT 0 YS2-8l03.q1k vc_5 320 62 5064 5063 C 259 0.00 359 reject_low 6 ALIGNMENT 41 YS2-8l03.q1k vc_4 319 359 5831 5871 F 41 100.00 359 reject_low 5 ALIGNMENT 0 YS2-8l03.q1k chr12 359 320 379521 379520 C 40 0.00 359 accept_chi 1 ALIGNMENT 41 YS2-8l03.q1k vc_3 359 319 2472 2512 C 41 100.00 359 reject_low 4 ALIGNMENT 39 YS2-8l03.q1k vc_5 359 321 5025 5063 C 39 100.00 359 reject_low 6 ALIGNMENT 257 YS2-8l03.p1k chr12 27 309 379520 379806 F 283 98.59 327 accept_chi 0 ALIGNMENT 41 YS2-8l03.q1k vc_1 359 319 2472 2512 C 41 100.00 359 reject_low 2 ALIGNMENT 0 YS2-8l03.q1k vc_5 320 62 37 36 C 259 0.00 359 reject_low 8 ALIGNMENT 0 YS2-8l03.q1k vc_2 318 62 2146 2145 C 257 0.00 359 reject_low 3 ALIGNMENT 0 YS2-8l03.q1k vc_1 318 62 2513 2512 C 257 0.00 359 reject_low 2 ALIGNMENT 36 YS2-8l03.q1k vc_5 356 321 1 36 C 36 100.00 359 reject_low 8 ALIGNMENT 256 YS2-8l03.q1k chr12 319 37 379520 379806 C 283 98.59 359 accept_chi 1 ALIGNMENT 38 YS2-8l03.q1k vc_7 322 359 13525 13562 F 38 100.00 359 reject_low 7 ALIGNMENT 0 YS2-8l03.p1k chr12 310 327 379806 379805 F 18 0.00 327 accept_chi 0 ALIGNMENT 0 YS2-8l03.q1k vc_7 62 321 13525 13524 F 260 0.00 359 reject_low 7 ALIGNMENT 0 YS2-8l03.q1k vc_3 318 62 2513 2512 C 257 0.00 359 reject_low 4 ALIGNMENT 41 YS2-8l03.q1k vc_2 359 319 2105 2145 C 41 100.00 359 reject_low 3 ALIGNMENT 904 YS2-8l04.q1k chr08 1104 40 172821 173907 C 1065 96.24 1204 accept 0 ALIGNMENT 989 YS2-8l04.p1k chr08 28 1202 169222 170400 F 1175 94.72 1353 accept 0 ALIGNMENT 0 YS2-8l05.p1k chr12 270 288 462159 462158 F 19 0.00 288 accept 1 ALIGNMENT 234 YS2-8l05.p1k chr12 31 269 461920 462159 F 239 99.58 288 accept 1 ALIGNMENT 234 YS2-8l05.p1k chr12 31 269 452783 453022 F 239 99.58 288 accept 0 ALIGNMENT 0 YS2-8l05.p1k chr12 270 288 453022 453021 F 19 0.00 288 accept 0 ALIGNMENT 948 YS2-8l06.q1k chr08 1117 28 453126 454219 C 1090 96.79 1218 accept 0 ALIGNMENT 982 YS2-8l06.p1k chr08 37 1194 449655 450812 F 1158 94.82 1355 accept 0 ALIGNMENT 694 YS2-8l08.q1k chr04 33 789 1268503 1269260 F 757 98.02 1160 accept 0 ALIGNMENT 979 YS2-8l08.p1k chr04 1156 30 1272225 1273368 C 1127 96.18 1444 accept 0 ALIGNMENT 658 YS2-8l09.q1k chr08 883 40 467904 468763 C 844 95.02 1223 accept 0 ALIGNMENT 899 YS2-8l09.p1k chr08 31 1036 467023 468043 F 1006 97.81 1320 accept 0 ALIGNMENT 0 YS2-8l11.p1k chr12 386 403 463211 463210 F 18 0.00 403 accept 1 ALIGNMENT 354 YS2-8l11.p1k chr12 30 385 462856 463211 F 356 100.00 403 accept 1 ALIGNMENT 354 YS2-8l11.p1k chr12 30 385 453719 454074 F 356 100.00 403 accept 0 ALIGNMENT 0 YS2-8l11.p1k chr12 386 403 454074 454073 F 18 0.00 403 accept 0 ALIGNMENT 20 YS2-8l12.p1k vc_7 865 846 2727 2746 C 20 100.00 1370 reject_low 15 ALIGNMENT 0 YS2-8l12.p1k vc_1 864 62 2106 2105 C 803 0.00 1370 reject_low 4 ALIGNMENT 217 YS2-8l12.p1k vc_2 1170 865 1787 2105 C 306 90.85 1370 reject_low 5 ALIGNMENT 42 YS2-8l12.q1k vc_3 899 858 2472 2513 C 42 100.00 1241 reject_low 27 ALIGNMENT 217 YS2-8l12.p1k vc_7 865 1170 100 418 F 306 90.85 1370 reject_low 3 ALIGNMENT 218 YS2-8l12.q1k vc_1 899 1197 2531 2835 F 299 91.97 1241 reject_low 9 ALIGNMENT 217 YS2-8l12.p1k vc_5 1170 865 4707 5025 C 306 90.85 1370 reject_low 2 ALIGNMENT 36 YS2-8l12.q1k vc_5 896 861 1 36 C 36 100.00 1241 reject_low 29 ALIGNMENT 66 YS2-8l12.q1k vc_4 977 899 1453 1534 C 79 96.20 1241 reject_low 21 ALIGNMENT 0 YS2-8l12.q1k vc_2 857 42 2147 2144 C 816 0.00 1241 reject_low 26 ALIGNMENT 0 YS2-8l12.q1k vc_1 62 898 2531 2530 F 837 0.00 1241 reject_low 9 ALIGNMENT 0 YS2-8l12.q1k vc_7 1103 1104 5172 6360 C 0 0.00 1241 reject_low 24 ALIGNMENT 28 YS2-8l12.p1k vc_3 898 865 2438 2472 C 34 94.12 1370 reject_low 23 ALIGNMENT 0 YS2-8l12.q1k vc_3 857 42 2514 2511 C 816 0.00 1241 reject_low 27 ALIGNMENT 0 YS2-8l12.p1k chr12 847 887 405684 405683 F 41 0.00 1370 accept_chi 1 ALIGNMENT 38 YS2-8l12.q1k vc_7 862 899 13525 13562 F 38 100.00 1241 reject_low 28 ALIGNMENT 0 YS2-8l12.q1k vc_7 62 861 13525 13524 F 800 0.00 1241 reject_low 28 ALIGNMENT 39 YS2-8l12.q1k vc_5 899 861 5025 5063 C 39 100.00 1241 reject_low 14 ALIGNMENT 42 YS2-8l12.q1k vc_4 858 899 5830 5871 F 42 100.00 1241 reject_low 16 ALIGNMENT 0 YS2-8l12.p1k vc_7 62 864 100 99 F 803 0.00 1370 reject_low 3 ALIGNMENT 0 YS2-8l12.p1k vc_2 62 845 2145 2144 F 784 0.00 1370 reject_low 19 ALIGNMENT 0 YS2-8l12.q1k vc_5 860 62 5064 5063 C 799 0.00 1241 reject_low 14 ALIGNMENT 0 YS2-8l12.p1k vc_1 866 887 2531 2530 F 22 0.00 1370 reject_low 18 ALIGNMENT 20 YS2-8l12.q1k vc_2 41 22 2145 2164 C 20 100.00 1241 reject_low 26 ALIGNMENT 20 YS2-8l12.p1k vc_1 846 865 2512 2531 F 20 100.00 1370 reject_low 18 ALIGNMENT 0 YS2-8l12.p1k vc_4 62 864 5871 5870 F 803 0.00 1370 reject_low 7 ALIGNMENT 217 YS2-8l12.p1k vc_3 1170 865 1787 2105 C 306 90.85 1370 reject_low 6 ALIGNMENT 218 YS2-8l12.q1k vc_5 899 1197 2398 2702 F 299 91.97 1241 reject_low 2 ALIGNMENT 20 YS2-8l12.q1k vc_3 41 22 2512 2531 C 20 100.00 1241 reject_low 27 ALIGNMENT 20 YS2-8l12.q1k vc_1 41 22 2512 2531 C 20 100.00 1241 reject_low 25 ALIGNMENT 0 YS2-8l12.p1k vc_1 864 62 2473 2472 C 803 0.00 1370 reject_low 22 ALIGNMENT 20 YS2-8l12.p1k vc_3 846 865 2512 2531 F 20 100.00 1370 reject_low 20 ALIGNMENT 0 YS2-8l12.q1k vc_1 857 42 2514 2511 C 816 0.00 1241 reject_low 25 ALIGNMENT 0 YS2-8l12.q1k vc_3 62 898 2531 2530 F 837 0.00 1241 reject_low 11 ALIGNMENT 28 YS2-8l12.p1k vc_1 898 865 2438 2472 C 34 94.12 1370 reject_low 22 ALIGNMENT 20 YS2-8l12.q1k vc_7 22 41 2727 2746 F 20 100.00 1241 reject_low 17 ALIGNMENT 0 YS2-8l12.p1k vc_7 845 62 2747 2746 C 784 0.00 1370 reject_low 15 ALIGNMENT 41 YS2-8l12.q1k vc_7 1104 1055 6360 6411 C 50 96.00 1241|1,0 reject_low 24 ALIGNMENT 0 YS2-8l12.q1k vc_5 923 900 5026 5025 C 24 0.00 1241 reject_low 14 ALIGNMENT 0 YS2-8l12.q1k vc_4 898 62 5813 5812 C 837 0.00 1241 reject_low 12 ALIGNMENT 20 YS2-8l12.q1k vc_4 22 41 5812 5831 F 20 100.00 1241 reject_low 16 ALIGNMENT 20 YS2-8l12.p1k vc_2 846 865 2145 2164 F 20 100.00 1370 reject_low 19 ALIGNMENT 0 YS2-8l12.p1k vc_3 62 845 2512 2511 F 784 0.00 1370 reject_low 20 ALIGNMENT 0 YS2-8l12.q1k vc_4 42 857 5832 5829 F 816 0.00 1241 reject_low 16 ALIGNMENT 0 YS2-8l12.q1k vc_1 923 900 2473 2472 C 24 0.00 1241 reject_low 25 ALIGNMENT 118 YS2-8l12.q1k vc_4 899 1056 126 287 F 158 93.04 1241 reject_low 13 ALIGNMENT 0 YS2-8l12.p1k vc_3 864 62 2106 2105 C 803 0.00 1370 reject_low 6 ALIGNMENT 0 YS2-8l12.q1k vc_4 62 898 126 125 F 837 0.00 1241 reject_low 13 ALIGNMENT 0 YS2-8l12.p1k vc_5 864 62 5026 5025 C 803 0.00 1370 reject_low 2 ALIGNMENT 20 YS2-8l12.p1k vc_4 865 846 5812 5831 C 20 100.00 1370 reject_low 13 ALIGNMENT 218 YS2-8l12.q1k vc_2 899 1197 2164 2468 F 299 91.97 1241 reject_low 10 ALIGNMENT 218 YS2-8l12.q1k vc_7 1197 899 2423 2727 C 299 92.31 1241 reject_low 3 ALIGNMENT 0 YS2-8l12.p1k vc_2 864 62 2106 2105 C 803 0.00 1370 reject_low 5 ALIGNMENT 0 YS2-8l12.p1k vc_7 887 866 2728 2727 C 22 0.00 1370 reject_low 15 ALIGNMENT 217 YS2-8l12.p1k vc_1 1170 865 1787 2105 C 306 90.85 1370 reject_low 4 ALIGNMENT 790 YS2-8l12.p1k chr12 31 846 404867 405684 F 816 99.63 1370 accept_chi 1 ALIGNMENT 42 YS2-8l12.q1k vc_1 899 858 2472 2513 C 42 100.00 1241 reject_low 25 ALIGNMENT 0 YS2-8l12.p1k vc_3 866 887 2531 2530 F 22 0.00 1370 reject_low 20 ALIGNMENT 0 YS2-8l12.p1k vc_4 887 866 5813 5812 C 22 0.00 1370 reject_low 13 ALIGNMENT 38 YS2-8l12.q1k vc_7 862 899 63 100 F 38 100.00 1241 reject_low 15 ALIGNMENT 0 YS2-8l12.p1k vc_7 62 864 13562 13561 F 803 0.00 1370 reject_low 8 ALIGNMENT 0 YS2-8l12.p1k vc_3 864 62 2473 2472 C 803 0.00 1370 reject_low 23 ALIGNMENT 0 YS2-8l12.q1k vc_7 900 923 100 99 F 24 0.00 1241 reject_low 15 ALIGNMENT 59 YS2-8l12.q1k vc_7 1197 1103 5078 5172 C 95 87.37 1241|0,1 reject_low 24 ALIGNMENT 0 YS2-8l12.p1k vc_5 62 845 2379 2378 F 784 0.00 1370 reject_low 14 ALIGNMENT 0 YS2-8l12.q1k vc_7 1054 62 6412 6411 C 993 0.00 1241 reject_low 24 ALIGNMENT 0 YS2-8l12.q1k vc_4 900 899 5872 6353 F 0 0.00 1241 reject_low 16 ALIGNMENT 0 YS2-8l12.q1k vc_5 923 897 2 1 C 27 0.00 1241 reject_low 29 ALIGNMENT 0 YS2-8l12.q1k vc_7 900 923 13562 13561 F 24 0.00 1241 reject_low 28 ALIGNMENT 0 YS2-8l12.q1k vc_2 923 900 2106 2105 C 24 0.00 1241 reject_low 26 ALIGNMENT 0 YS2-8l12.q1k vc_5 62 898 2398 2397 F 837 0.00 1241 reject_low 2 ALIGNMENT 0 YS2-8l12.q1k vc_7 62 861 63 62 F 800 0.00 1241 reject_low 15 ALIGNMENT 0 YS2-8l12.q1k vc_5 860 42 37 2378 C 819 0.00 1241 reject_low 29 ALIGNMENT 0 YS2-8l12.q1k vc_7 898 62 2728 2727 C 837 0.00 1241 reject_low 3 ALIGNMENT 0 YS2-8l12.q1k vc_7 42 923 2746 2745 F 882 0.00 1241 reject_low 17 ALIGNMENT 0 YS2-8l12.p1k vc_1 62 845 2512 2511 F 784 0.00 1370 reject_low 18 ALIGNMENT 218 YS2-8l12.q1k vc_3 899 1197 2531 2835 F 299 91.97 1241 reject_low 11 ALIGNMENT 20 YS2-8l12.p1k vc_5 846 865 2379 2398 F 20 100.00 1370 reject_low 14 ALIGNMENT 0 YS2-8l12.q1k vc_4 898 62 1535 1534 C 837 0.00 1241 reject_low 21 ALIGNMENT 0 YS2-8l12.q1k vc_2 62 898 2164 2163 F 837 0.00 1241 reject_low 10 ALIGNMENT 0 YS2-8l12.q1k chr12 923 859 404868 404867 C 65 0.00 1241 accept_chi 0 ALIGNMENT 217 YS2-8l12.p1k vc_7 865 1170 13562 13880 F 306 90.85 1370 reject_low 8 ALIGNMENT 0 YS2-8l12.p1k vc_4 845 62 5832 5831 C 784 0.00 1370 reject_low 13 ALIGNMENT 217 YS2-8l12.p1k vc_4 865 1170 5871 6189 F 306 90.85 1370 reject_low 7 ALIGNMENT 0 YS2-8l12.p1k vc_5 866 887 2398 2397 F 22 0.00 1370 reject_low 14 ALIGNMENT 42 YS2-8l12.q1k vc_2 899 858 2105 2146 C 42 100.00 1241 reject_low 26 ALIGNMENT 0 YS2-8l12.p1k vc_2 866 887 2164 2163 F 22 0.00 1370 reject_low 19 ALIGNMENT 20 YS2-8l12.q1k vc_5 41 22 2379 2398 C 20 100.00 1241 reject_low 29 ALIGNMENT 800 YS2-8l12.q1k chr12 858 41 404867 405684 C 818 99.88 1241 accept_chi 0 ALIGNMENT 0 YS2-8l12.q1k vc_3 923 900 2473 2472 C 24 0.00 1241 reject_low 27 ALIGNMENT 118 YS2-8l12.q1k vc_4 899 1056 6353 6514 F 158 93.04 1241|1,0 reject_low 16 ALIGNMENT 211 YS2-8l12.q1k vc_4 1197 899 5506 5812 C 299 91.64 1241 reject_low 12 ALIGNMENT 988 YS2-8l13.q1k chr04 29 1184 276635 277791 F 1156 95.76 1244 accept 0 ALIGNMENT 921 YS2-8l13.p1k chr04 1084 29 280059 281128 C 1056 96.69 1219 accept 0 ALIGNMENT 970 YS2-8l14.p1k chr11 1132 39 116328 117437 C 1094 96.89 1284 accept 0 ALIGNMENT 963 YS2-8l14.q1k chr11 29 1137 111839 112950 F 1109 96.75 1235 accept 0 ALIGNMENT 0 YS2-8l15.p1k chr07 229 211 392431 392430 C 19 0.00 229 accept 0 ALIGNMENT 174 YS2-8l15.p1k chr07 210 28 392430 392612 C 183 100.00 229 accept 0 ALIGNMENT 0 YS2-8l16.q1k vc_3 241 62 2513 2512 C 180 0.00 282 reject_low 3 ALIGNMENT 0 YS2-8l16.q1k vc_1 241 62 2513 2512 C 180 0.00 282 reject_low 2 ALIGNMENT 0 YS2-8l16.q1k vc_4 62 241 5831 5830 F 180 0.00 282 reject_low 4 ALIGNMENT 191 YS2-8l16.q1k chr04 33 241 459798 460008 F 209 99.04 282 accept_chi 1 ALIGNMENT 37 YS2-8l16.q1k vc_5 279 240 1 40 C 40 97.50 282 reject_low 7 ALIGNMENT 0 YS2-8l16.q1k vc_5 239 62 5068 5067 C 178 0.00 282 reject_low 5 ALIGNMENT 41 YS2-8l16.q1k vc_3 282 242 2472 2512 C 41 100.00 282 reject_low 3 ALIGNMENT 41 YS2-8l16.q1k vc_1 282 242 2472 2512 C 41 100.00 282 reject_low 2 ALIGNMENT 41 YS2-8l16.q1k vc_4 242 282 5831 5871 F 41 100.00 282 reject_low 4 ALIGNMENT 0 YS2-8l16.q1k vc_5 239 62 41 40 C 178 0.00 282 reject_low 7 ALIGNMENT 0 YS2-8l16.q1k vc_7 62 244 13525 13524 F 183 0.00 282 reject_low 6 ALIGNMENT 0 YS2-8l16.p1k chr04 258 240 459796 459795 C 19 0.00 258 accept_chi 0 ALIGNMENT 38 YS2-8l16.q1k vc_7 245 282 13525 13562 F 38 100.00 282 reject_low 6 ALIGNMENT 40 YS2-8l16.q1k vc_5 282 240 5025 5067 C 43 97.67 282 reject_low 5 ALIGNMENT 197 YS2-8l16.p1k chr04 239 29 459795 460006 C 211 99.53 258 accept_chi 0 ALIGNMENT 0 YS2-8l16.q1k chr04 242 282 460008 460007 F 41 0.00 282 accept_chi 1 ALIGNMENT 0 YS2-8l17.p1k chr15 62 332 663813 663812 F 271 0.00 1164 reject_low 11 ALIGNMENT 82 YS2-8l17.p1k chr08 314 406 85277 85368 F 93 97.85 1164 reject_low 1 ALIGNMENT 78 YS2-8l17.p1k chr13 325 406 586628 586709 F 82 98.78 1164 reject_low 9 ALIGNMENT 0 YS2-8l17.p1k chr11 321 62 379408 379407 C 260 0.00 1164 reject_low 3 ALIGNMENT 938 YS2-8l17.p1k chr07 36 1162 73532 74662 F 1127 95.21 1164 accept 0 ALIGNMENT 77 YS2-8l17.p1k chr12 326 405 687855 687934 F 80 98.75 1164 reject_low 10 ALIGNMENT 0 YS2-8l17.p1k chr07 325 62 823567 823566 C 264 0.00 1164 reject_low 7 ALIGNMENT 0 YS2-8l17.p1k chr05 826 406 438697 438696 C 421 0.00 1164 reject_low 6 ALIGNMENT 0 YS2-8l17.p1k chr12 406 826 687934 687933 F 421 0.00 1164 reject_low 10 ALIGNMENT 77 YS2-8l17.p1k chr05 405 322 438696 438779 C 84 97.62 1164 reject_low 6 ALIGNMENT 0 YS2-8l17.p1k chr13 62 324 372437 372436 F 263 0.00 1164 reject_low 8 ALIGNMENT 0 YS2-8l17.p1k chr08 407 826 85368 85367 F 420 0.00 1164 reject_low 1 ALIGNMENT 0 YS2-8l17.p1k chr10 324 62 378357 378356 C 263 0.00 1164 reject_low 4 ALIGNMENT 0 YS2-8l17.p1k chr13 407 826 586709 586708 F 420 0.00 1164 reject_low 9 ALIGNMENT 0 YS2-8l17.p1k chr07 62 331 412297 412296 F 270 0.00 1164 reject_low 13 ALIGNMENT 0 YS2-8l17.p1k chr13 62 324 586628 586627 F 263 0.00 1164 reject_low 9 ALIGNMENT 0 YS2-8l17.p1k chr13 407 826 372518 372517 F 420 0.00 1164 reject_low 8 ALIGNMENT 0 YS2-8l17.p1k chr13 406 826 420660 420659 F 421 0.00 1164 reject_low 12 ALIGNMENT 79 YS2-8l17.p1k chr05 410 326 469447 469531 C 85 97.65 1164 reject_low 5 ALIGNMENT 0 YS2-8l17.p1k chr11 415 826 307871 307870 F 412 0.00 1164 reject_low 2 ALIGNMENT 0 YS2-8l17.p1k chr08 62 313 85277 85276 F 252 0.00 1164 reject_low 1 ALIGNMENT 78 YS2-8l17.p1k chr13 325 406 372437 372518 F 82 98.78 1164 reject_low 8 ALIGNMENT 76 YS2-8l17.p1k chr13 330 405 420585 420660 F 76 100.00 1164 reject_low 12 ALIGNMENT 77 YS2-8l17.p1k chr11 412 322 379316 379407 C 91 95.60 1164 reject_low 3 ALIGNMENT 0 YS2-8l17.p1k chr05 321 62 438780 438779 C 260 0.00 1164 reject_low 6 ALIGNMENT 0 YS2-8l17.p1k chr05 826 411 469448 469447 C 416 0.00 1164 reject_low 5 ALIGNMENT 0 YS2-8l17.p1k chr15 409 826 663888 663887 F 418 0.00 1164 reject_low 11 ALIGNMENT 0 YS2-8l17.p1k chr10 826 414 378269 378268 C 413 0.00 1164 reject_low 4 ALIGNMENT 0 YS2-8l17.p1k chr07 826 409 823485 823484 C 418 0.00 1164 reject_low 7 ALIGNMENT 75 YS2-8l17.p1k chr07 332 406 412297 412371 F 75 100.00 1164 reject_low 13 ALIGNMENT 80 YS2-8l17.p1k chr07 408 326 823484 823566 C 83 98.80 1164 reject_low 7 ALIGNMENT 959 YS2-8l17.q1k chr07 1197 38 77429 78586 C 1160 95.34 1232 accept 0 ALIGNMENT 76 YS2-8l17.p1k chr10 413 325 378268 378356 C 89 95.51 1164 reject_low 4 ALIGNMENT 0 YS2-8l17.p1k chr11 62 321 307779 307778 F 260 0.00 1164 reject_low 2 ALIGNMENT 76 YS2-8l17.p1k chr15 333 408 663813 663888 F 76 100.00 1164 reject_low 11 ALIGNMENT 0 YS2-8l17.p1k chr07 407 826 412371 412370 F 420 0.00 1164 reject_low 13 ALIGNMENT 0 YS2-8l17.p1k chr05 325 62 469532 469531 C 264 0.00 1164 reject_low 5 ALIGNMENT 0 YS2-8l17.p1k chr13 62 329 420585 420584 F 268 0.00 1164 reject_low 12 ALIGNMENT 0 YS2-8l17.p1k chr11 826 413 379317 379316 C 414 0.00 1164 reject_low 3 ALIGNMENT 0 YS2-8l17.p1k chr12 62 325 687855 687854 F 264 0.00 1164 reject_low 10 ALIGNMENT 86 YS2-8l17.p1k chr11 322 414 307779 307871 F 93 97.85 1164 reject_low 2 ALIGNMENT 23 YS2-8l18.p1k chrm 569 593 84193 84217 F 25 100.00 1235 reject_low 19 ALIGNMENT 0 YS2-8l18.p1k chrm 626 583 53750 53735 C 44 0.00 1235 reject_low 5 ALIGNMENT 0 YS2-8l18.p1k chrm 802 62 53883 53882 C 741 0.00 1235 reject_low 2 ALIGNMENT 20 YS2-8l18.p1k chrm 582 561 53736 53757 C 22 100.00 1235|10,0 reject_low 5,20,21,22 ALIGNMENT 0 YS2-8l18.p1k chrm 804 62 66879 66878 C 743 0.00 1235 reject_low 7 ALIGNMENT 0 YS2-8l18.q1k chrm 326 739 52816 53219 F 414 0.00 1244 reject_low 2,5 ALIGNMENT 23 YS2-8l18.p1k chrm 612 640 84178 84206 F 29 93.10 1235 reject_low 10 ALIGNMENT 0 YS2-8l18.p1k chrm 466 62 78033 78032 C 405 0.00 1235 reject_low 1 ALIGNMENT 0 YS2-8l18.q1k chrm 326 712 9075 9074 F 387 0.00 1244 reject_low 15 ALIGNMENT 436 YS2-8l18.p1k chrm 1143 29 77371 78482 C 1115 88.70 1235 accept 0 ALIGNMENT 29 YS2-8l18.p1k chrm 854 815 46317 46356 C 40 95.00 1235 reject_low 21 ALIGNMENT 0 YS2-8l18.p1k chrm 810 62 29887 29886 C 749 0.00 1235 reject_low 14 ALIGNMENT 39 YS2-8l18.p1k chrm 808 888 4530 4608 F 81 85.19 1235 reject_low 3 ALIGNMENT 0 YS2-8l18.p1k chrm 850 569 77932 77931 C 282 0.00 1235 reject_low 1 ALIGNMENT 24 YS2-8l18.p1k chrm 659 627 53717 53749 C 33 93.94 1235 reject_low 5 ALIGNMENT 0 YS2-8l18.q1k chrm 712 325 47475 47474 C 388 0.00 1244 reject_low 11 ALIGNMENT 49 YS2-8l18.q1k chrm 277 339 69439 69499 F 63 95.24 1244 reject_low 1 ALIGNMENT 0 YS2-8l18.q1k chrm 440 712 8396 8395 F 273 0.00 1244 reject_low 4 ALIGNMENT 0 YS2-8l18.p1k chrm 850 617 47959 47958 C 234 0.00 1235 reject_low 20 ALIGNMENT 29 YS2-8l18.p1k chrm 854 815 48104 48143 C 40 95.00 1235 reject_low 22 ALIGNMENT 0 YS2-8l18.p1k chrm 62 611 84178 84177 F 550 0.00 1235 reject_low 10 ALIGNMENT 0 YS2-8l18.q1k chrm 252 62 47550 47549 C 191 0.00 1244 reject_low 11 ALIGNMENT 0 YS2-8l18.p1k chrm 62 568 84193 84192 F 507 0.00 1235 reject_low 19 ALIGNMENT 0 YS2-8l18.p1k chrm 62 502 68548 68547 F 441 0.00 1235 reject_low 6 ALIGNMENT 36 YS2-8l18.p1k chrm 864 805 66819 66878 C 60 86.67 1235 reject_low 7 ALIGNMENT 0 YS2-8l18.q1k chrm 62 262 8217 8216 F 201 0.00 1244 reject_low 4 ALIGNMENT 0 YS2-8l18.p1k chrm 814 62 2137 2136 C 753 0.00 1235 reject_low 17 ALIGNMENT 46 YS2-8l18.q1k chrm 258 333 66804 66878 F 76 88.16 1244 reject_low 7 ALIGNMENT 0 YS2-8l18.q1k chrm 109 62 9704 9703 C 48 0.00 1244 reject_low 3 ALIGNMENT 0 YS2-8l18.p1k chrm 620 850 84237 84236 F 231 0.00 1235 reject_low 19 ALIGNMENT 0 YS2-8l18.q1k chrm 62 276 9027 9026 F 215 0.00 1244 reject_low 15 ALIGNMENT 0 YS2-8l18.p1k chrm 560 62 53758 53757 C 499 0.00 1235 reject_low 5,20,21,22 ALIGNMENT 0 YS2-8l18.q1k chrm 62 266 52758 52757 F 205 0.00 1244 reject_low 2,5 ALIGNMENT 45 YS2-8l18.q1k chrm 267 325 52758 52815 F 59 93.22 1244 reject_low 2,5 ALIGNMENT 37 YS2-8l18.q1k chrm 346 110 9467 9703 C 237 80.59 1244 reject_low 3 ALIGNMENT 52 YS2-8l18.q1k chrm 324 253 47474 47549 C 72 91.67 1244 reject_low 11 ALIGNMENT 0 YS2-8l18.q1k chrm 62 276 69439 69438 F 215 0.00 1244 reject_low 1 ALIGNMENT 0 YS2-8l18.q1k chrm 62 257 66804 66803 F 196 0.00 1244 reject_low 7 ALIGNMENT 0 YS2-8l18.q1k chrm 330 712 53874 53873 F 383 0.00 1244 reject_low 16 ALIGNMENT 0 YS2-8l18.p1k chrm 814 660 46357 53665 C 155 0.00 1235 reject_low 21 ALIGNMENT 22 YS2-8l18.p1k chrm 616 562 47958 48007 C 55 87.27 1235|0,11 reject_low 20 ALIGNMENT 27 YS2-8l18.p1k chrm 823 854 67955 67986 F 32 100.00 1235 reject_low 18 ALIGNMENT 59 YS2-8l18.q1k chrm 260 332 11026 11097 F 73 94.52 1244 reject_low 9 ALIGNMENT 41 YS2-8l18.p1k chrm 801 854 9476 9529 F 54 92.59 1235 reject_low 13 ALIGNMENT 20 YS2-8l18.p1k chrm 594 619 84213 84237 F 26 96.15 1235 reject_low 19 ALIGNMENT 59 YS2-8l18.p1k chrm 568 467 77931 78032 C 102 100.00 1235 reject_low 1 ALIGNMENT 24 YS2-8l18.p1k chrm 659 621 53666 53704 C 39 87.18 1235 reject_low 21,22 ALIGNMENT 632 YS2-8l18.q1k chrm 27 909 76337 77223 F 883 96.60 1244 accept 0 ALIGNMENT 0 YS2-8l18.p1k chrm 594 593 84218 84212 F 0 0.00 1235 reject_low 19 ALIGNMENT 0 YS2-8l18.q1k chrm 712 326 84 83 C 387 0.00 1244 reject_low 12 ALIGNMENT 40 YS2-8l18.p1k chrm 503 619 68548 68666 F 117 82.91 1235 reject_low 6 ALIGNMENT 47 YS2-8l18.q1k chrm 263 439 8217 8396 F 177 83.05 1244 reject_low 4 ALIGNMENT 0 YS2-8l18.q1k chrm 712 347 9468 9467 C 366 0.00 1244 reject_low 3 ALIGNMENT 0 YS2-8l18.p1k chrm 62 807 4530 4529 F 746 0.00 1235 reject_low 3 ALIGNMENT 0 YS2-8l18.p1k chrm 620 583 53705 53735 C 38 0.00 1235 reject_low 21,22 ALIGNMENT 32 YS2-8l18.q1k chrm 740 787 53220 53267 F 48 91.67 1244 reject_low 2,5 ALIGNMENT 38 YS2-8l18.p1k chrm 854 803 53829 53882 C 52 92.31 1235 reject_low 2 ALIGNMENT 29 YS2-8l18.p1k chrm 854 815 2097 2136 C 40 95.00 1235 reject_low 17 ALIGNMENT 0 YS2-8l18.p1k chrm 814 660 48144 53665 C 155 0.00 1235 reject_low 22 ALIGNMENT 0 YS2-8l18.p1k chrm 850 660 53718 53717 C 191 0.00 1235 reject_low 5 ALIGNMENT 0 YS2-8l18.q1k chrm 334 712 66878 66877 F 379 0.00 1244 reject_low 7 ALIGNMENT 0 YS2-8l18.p1k chrm 620 850 68666 68665 F 231 0.00 1235 reject_low 6 ALIGNMENT 0 YS2-8l18.q1k chrm 252 62 156 155 C 191 0.00 1244 reject_low 12 ALIGNMENT 44 YS2-8l18.q1k chrm 277 329 53823 53874 F 53 96.23 1244 reject_low 16 ALIGNMENT 0 YS2-8l18.p1k chrm 62 800 9476 9475 F 739 0.00 1235 reject_low 13 ALIGNMENT 0 YS2-8l18.p1k chrm 62 822 67955 67954 F 761 0.00 1235 reject_low 18 ALIGNMENT 38 YS2-8l18.p1k chrm 854 811 29843 29886 C 44 97.73 1235 reject_low 14 ALIGNMENT 0 YS2-8l18.q1k chrm 333 712 11097 11096 F 380 0.00 1244 reject_low 9 ALIGNMENT 0 YS2-8l18.q1k chrm 62 276 53823 53822 F 215 0.00 1244 reject_low 16 ALIGNMENT 0 YS2-8l18.p1k chrm 800 62 84544 84543 C 739 0.00 1235 reject_low 8 ALIGNMENT 0 YS2-8l18.q1k chrm 340 712 69499 69498 F 373 0.00 1244 reject_low 1 ALIGNMENT 50 YS2-8l18.p1k chrm 854 801 84490 84543 C 54 98.15 1235 reject_low 8 ALIGNMENT 49 YS2-8l18.q1k chrm 325 253 83 155 C 73 90.41 1244 reject_low 12 ALIGNMENT 0 YS2-8l18.q1k chrm 62 259 11026 11025 F 198 0.00 1244 reject_low 9 ALIGNMENT 0 YS2-8l18.p1k chrm 641 850 84206 84205 F 210 0.00 1235 reject_low 10 ALIGNMENT 0 YS2-8l18.p1k chrm 572 573 47997 53745 C 0 0.00 1235 reject_low 20 ALIGNMENT 47 YS2-8l18.q1k chrm 277 325 9027 9075 F 49 100.00 1244 reject_low 15 ALIGNMENT 584 YS2-8l20.p1k chr04 640 37 604320 604923 C 604 99.67 658 accept_chi 0 ALIGNMENT 582 YS2-8l20.q1k chr04 39 644 604320 604926 F 606 99.50 645 accept_chi 1 ALIGNMENT 0 YS2-8l20.p1k chr04 658 641 604321 604320 C 18 0.00 658 accept_chi 0 ALIGNMENT 945 YS2-8l22.q1k chr04 30 1124 715753 716847 F 1095 96.62 1128 accept 0 ALIGNMENT 1029 YS2-8l22.p1k chr04 1236 33 716003 717205 C 1204 96.18 1239 accept 0 ALIGNMENT 862 YS2-8l24.p1k chr03 1150 35 98380 99491 C 1116 93.37 1190 accept_chi 0 ALIGNMENT 515 YS2-8l24.q1k chr15 49 674 1018088 1018711 F 626 95.05 800 accept_chi 1 ALIGNMENT 959 YS2-8m01.q1k chr12 1161 29 284194 285333 C 1133 95.41 1257 accept 0 ALIGNMENT 41 YS2-8m02.q1k vc_1 205 165 2472 2512 C 41 100.00 205 reject_low 1 ALIGNMENT 0 YS2-8m02.q1k vc_4 62 164 5831 5830 F 103 0.00 205 reject_low 4 ALIGNMENT 36 YS2-8m02.q1k vc_5 202 167 1 36 C 36 100.00 205 reject_low 7 ALIGNMENT 39 YS2-8m02.q1k vc_5 205 167 5025 5063 C 39 100.00 205 reject_low 5 ALIGNMENT 41 YS2-8m02.q1k vc_3 205 165 2472 2512 C 41 100.00 205 reject_low 3 ALIGNMENT 0 YS2-8m02.q1k vc_2 164 62 2146 2145 C 103 0.00 205 reject_low 2 ALIGNMENT 0 YS2-8m02.q1k vc_5 166 62 37 36 C 105 0.00 205 reject_low 7 ALIGNMENT 0 YS2-8m02.q1k vc_7 62 167 13525 13524 F 106 0.00 205 reject_low 6 ALIGNMENT 41 YS2-8m02.q1k vc_4 165 205 5831 5871 F 41 100.00 205 reject_low 4 ALIGNMENT 41 YS2-8m02.q1k vc_2 205 165 2105 2145 C 41 100.00 205 reject_low 2 ALIGNMENT 0 YS2-8m02.q1k vc_1 164 62 2513 2512 C 103 0.00 205 reject_low 1 ALIGNMENT 122 YS2-8m02.q1k chr04 40 164 1457955 1458079 F 125 100.00 205 accept 0 ALIGNMENT 0 YS2-8m02.q1k chr04 165 205 1458079 1458078 F 41 0.00 205 accept 0 ALIGNMENT 0 YS2-8m02.q1k vc_3 164 62 2513 2512 C 103 0.00 205 reject_low 3 ALIGNMENT 0 YS2-8m02.q1k vc_5 166 62 5064 5063 C 105 0.00 205 reject_low 5 ALIGNMENT 38 YS2-8m02.q1k vc_7 168 205 13525 13562 F 38 100.00 205 reject_low 6 ALIGNMENT 978 YS2-8m04.q1k chr10 36 1129 73492 74589 F 1094 96.44 1328 accept 0 ALIGNMENT 225 YS2-8m04.q1k chr03 1129 745 177516 177904 C 385 84.16 1328 reject_low 1 ALIGNMENT 0 YS2-8m04.q1k chr03 744 62 177905 177904 C 683 0.00 1328 reject_low 1 ALIGNMENT 959 YS2-8m04.p1k chr10 1153 31 77034 78168 C 1123 96.08 1332 accept 0 ALIGNMENT 334 YS2-8m05.p1k vc_7 1 538 13918 14464 F 538 88.66 540 reject_vc 7 ALIGNMENT 0 YS2-8m05.q1k vc_4 62 383 5831 5830 F 322 0.00 424 reject_low 11 ALIGNMENT 0 YS2-8m05.q1k vc_1 383 62 2513 2512 C 322 0.00 424 reject_low 8 ALIGNMENT 340 YS2-8m05.p1k vc_1 538 1 1203 1749 C 538 89.03 540 reject_vc 3 ALIGNMENT 38 YS2-8m05.q1k vc_7 387 424 13525 13562 F 38 100.00 424 reject_low 12 ALIGNMENT 340 YS2-8m05.p1k vc_3 538 1 1203 1749 C 538 89.03 540 reject_vc 5 ALIGNMENT 0 YS2-8m05.q1k vc_3 383 62 2513 2512 C 322 0.00 424 reject_low 10 ALIGNMENT 334 YS2-8m05.p1k vc_7 1 538 456 1002 F 538 88.66 540 reject_vc 6 ALIGNMENT 316 YS2-8m05.q1k chr14 38 383 40373 40718 F 346 98.55 424 accept 0 ALIGNMENT 41 YS2-8m05.q1k vc_3 424 384 2472 2512 C 41 100.00 424 reject_low 10 ALIGNMENT 343 YS2-8m05.p1k vc_6 1 538 3712 4258 F 538 89.22 540 reject_vc 2 ALIGNMENT 41 YS2-8m05.q1k vc_4 384 424 5831 5871 F 41 100.00 424 reject_low 11 ALIGNMENT 41 YS2-8m05.q1k vc_1 424 384 2472 2512 C 41 100.00 424 reject_low 8 ALIGNMENT 0 YS2-8m05.q1k chr14 384 424 40718 40717 F 41 0.00 424 accept 0 ALIGNMENT 0 YS2-8m05.q1k vc_2 383 62 2146 2145 C 322 0.00 424 reject_low 9 ALIGNMENT 0 YS2-8m05.q1k vc_7 62 386 13525 13524 F 325 0.00 424 reject_low 12 ALIGNMENT 343 YS2-8m05.p1k vc_5 538 1 4123 4669 C 538 89.22 540 reject_vc 1 ALIGNMENT 41 YS2-8m05.q1k vc_2 424 384 2105 2145 C 41 100.00 424 reject_low 9 ALIGNMENT 340 YS2-8m05.p1k vc_2 538 1 1203 1749 C 538 89.03 540 reject_vc 4 ALIGNMENT 0 YS2-8m06.q1k vc_4 62 171 5831 5830 F 110 0.00 212 reject_low 3 ALIGNMENT 0 YS2-8m06.q1k vc_3 171 62 2513 2512 C 110 0.00 212 reject_low 2 ALIGNMENT 37 YS2-8m06.q1k vc_5 209 170 1 40 C 40 97.50 212 reject_low 6 ALIGNMENT 0 YS2-8m06.q1k vc_1 171 62 2513 2512 C 110 0.00 212 reject_low 1 ALIGNMENT 0 YS2-8m06.q1k chr02 212 172 730284 730283 C 41 0.00 212 accept 0 ALIGNMENT 41 YS2-8m06.q1k vc_4 172 212 5831 5871 F 41 100.00 212 reject_low 3 ALIGNMENT 0 YS2-8m06.q1k vc_5 169 62 5068 5067 C 108 0.00 212 reject_low 4 ALIGNMENT 38 YS2-8m06.q1k vc_7 175 212 13525 13562 F 38 100.00 212 reject_low 5 ALIGNMENT 41 YS2-8m06.q1k vc_3 212 172 2472 2512 C 41 100.00 212 reject_low 2 ALIGNMENT 40 YS2-8m06.q1k vc_5 212 170 5025 5067 C 43 97.67 212 reject_low 4 ALIGNMENT 0 YS2-8m06.q1k vc_5 169 62 41 40 C 108 0.00 212 reject_low 6 ALIGNMENT 0 YS2-8m06.q1k vc_7 62 174 13525 13524 F 113 0.00 212 reject_low 5 ALIGNMENT 122 YS2-8m06.q1k chr02 171 37 730283 730418 C 135 98.52 212 accept 0 ALIGNMENT 41 YS2-8m06.q1k vc_1 212 172 2472 2512 C 41 100.00 212 reject_low 1 ALIGNMENT 302 YS2-8m08.q1k chr05 733 366 354359 354726 C 368 95.11 1262 reject_low 13 ALIGNMENT 0 YS2-8m08.q1k chr02 365 62 36219 36218 C 304 0.00 1262 reject_low 5 ALIGNMENT 314 YS2-8m08.q1k chr08 366 733 85535 85902 F 368 96.20 1262 reject_low 8 ALIGNMENT 0 YS2-8m08.q1k chr10 62 363 197462 197461 F 302 0.00 1262 reject_low 4 ALIGNMENT 325 YS2-8m08.q1k chr10 364 733 197462 197831 F 370 97.03 1262 reject_low 4 ALIGNMENT 0 YS2-8m08.q1k chr14 62 365 561608 561607 F 304 0.00 1262 reject_low 9 ALIGNMENT 0 YS2-8m08.q1k chr07 365 62 931544 931543 C 304 0.00 1262 reject_low 17 ALIGNMENT 36 YS2-8m08.q1k chr06 542 730 144325 144513 F 189 76.19 1262 reject_low 25 ALIGNMENT 0 YS2-8m08.q1k chr06 62 541 144325 144324 F 480 0.00 1262 reject_low 25 ALIGNMENT 311 YS2-8m08.q1k chr14 366 733 561608 561975 F 368 95.92 1262 reject_low 9 ALIGNMENT 311 YS2-8m08.q1k chr16 733 366 442742 443109 C 368 95.92 1262 reject_low 10 ALIGNMENT 280 YS2-8m08.q1k chr04 365 733 437145 437512 F 369 93.22 1262 reject_low 16 ALIGNMENT 0 YS2-8m08.q1k chr04 62 364 437145 437144 F 303 0.00 1262 reject_low 16 ALIGNMENT 58 YS2-8m08.p1k chr01 620 482 187385 187523 C 139 82.01 1447 reject_low 22 ALIGNMENT 75 YS2-8m08.p1k chr01 975 817 188073 188231 C 159 81.76 1447 reject_low 20 ALIGNMENT 614 YS2-8m08.q1k chr16 733 38 436890 437585 C 696 97.84 1262 ambiguous_trans 3 ALIGNMENT 0 YS2-8m08.q1k chr15 62 365 703773 703772 F 304 0.00 1262 reject_low 19 ALIGNMENT 626 YS2-8m08.q1k chr10 38 733 202991 203686 F 696 98.42 1262 ambiguous_trans 1 ALIGNMENT 609 YS2-8m08.p1k chr01 878 29 186031 186880 C 850 91.76 1447 accept 0 ALIGNMENT 0 YS2-8m08.p1k chr01 816 621 187147 187384 C 196 0.00 1447 reject_low 22 ALIGNMENT 298 YS2-8m08.q1k chr13 733 365 808539 808906 C 369 94.85 1262 reject_low 15 ALIGNMENT 0 YS2-8m08.p1k chr07 481 62 403103 403102 C 420 0.00 1447 reject_low 24 ALIGNMENT 0 YS2-8m08.p1k chr01 481 62 187524 187523 C 420 0.00 1447 reject_low 22 ALIGNMENT 0 YS2-8m08.q1k chr08 62 365 85535 85534 F 304 0.00 1262 reject_low 8 ALIGNMENT 309 YS2-8m08.q1k chr02 733 365 643486 643854 C 369 95.66 1262 reject_low 11 ALIGNMENT 0 YS2-8m08.p1k chr01 780 62 183931 183930 C 719 0.00 1447 reject_low 21 ALIGNMENT 0 YS2-8m08.q1k chr13 364 62 808907 808906 C 303 0.00 1262 reject_low 15 ALIGNMENT 244 YS2-8m08.q1k chr15 366 656 703773 704063 F 291 95.53 1262 reject_low 19 ALIGNMENT 127 YS2-8m08.q1k chr14 365 524 96450 96609 F 160 93.75 1262 reject_low 23 ALIGNMENT 62 YS2-8m08.p1k chr07 933 817 402606 402722 C 117 83.76 1447 reject_low 24 ALIGNMENT 53 YS2-8m08.p1k chr01 933 781 183778 183930 C 153 77.78 1447 reject_low 21 ALIGNMENT 0 YS2-8m08.q1k chr14 525 663 96609 96608 F 139 0.00 1262 reject_low 23 ALIGNMENT 323 YS2-8m08.q1k chr13 366 733 503770 504137 F 368 97.01 1262 reject_low 7 ALIGNMENT 0 YS2-8m08.p1k chr01 816 62 188232 188231 C 755 0.00 1447 reject_low 20 ALIGNMENT 276 YS2-8m08.q1k chr07 733 366 931177 931543 C 368 92.93 1262 reject_low 17 ALIGNMENT 0 YS2-8m08.q1k chr05 365 62 354727 354726 C 304 0.00 1262 reject_low 13 ALIGNMENT 0 YS2-8m08.q1k chr16 365 62 443110 443109 C 304 0.00 1262 reject_low 10 ALIGNMENT 0 YS2-8m08.q1k chr14 365 62 632492 632491 C 304 0.00 1262 reject_low 14 ALIGNMENT 302 YS2-8m08.q1k chr14 733 366 632124 632491 C 368 95.11 1262 reject_low 14 ALIGNMENT 0 YS2-8m08.q1k chr09 365 62 197021 197020 C 304 0.00 1262 reject_low 6 ALIGNMENT 0 YS2-8m08.q1k chr14 62 364 96450 96449 F 303 0.00 1262 reject_low 23 ALIGNMENT 0 YS2-8m08.q1k chr07 62 364 110858 110857 F 303 0.00 1262 reject_low 12 ALIGNMENT 0 YS2-8m08.q1k chr13 62 365 503770 503769 F 304 0.00 1262 reject_low 7 ALIGNMENT 309 YS2-8m08.q1k chr07 365 733 110858 111226 F 369 95.66 1262 reject_low 12 ALIGNMENT 55 YS2-8m08.p1k chr07 620 482 402964 403102 C 139 81.29 1447 reject_low 24 ALIGNMENT 87 YS2-8m08.p1k chr07 975 817 403662 403820 C 159 84.28 1447 reject_low 18 ALIGNMENT 0 YS2-8m08.p1k chr07 816 621 402723 402963 C 196 0.00 1447 reject_low 24 ALIGNMENT 65 YS2-8m08.p1k chr01 965 817 186998 187146 C 149 80.54 1447 reject_low 22 ALIGNMENT 614 YS2-8m08.q1k chr08 38 733 91059 91754 F 696 97.84 1262 ambiguous_trans 2 ALIGNMENT 0 YS2-8m08.p1k chr07 816 62 403821 403820 C 755 0.00 1447 reject_low 18 ALIGNMENT 323 YS2-8m08.q1k chr09 733 366 196653 197020 C 368 97.01 1262 reject_low 6 ALIGNMENT 323 YS2-8m08.q1k chr02 733 366 35851 36218 C 368 97.01 1262 reject_low 5 ALIGNMENT 0 YS2-8m08.q1k chr02 364 62 643855 643854 C 303 0.00 1262 reject_low 11 ALIGNMENT 966 YS2-8m09.p1k chr02 1220 42 348725 349908 C 1179 95.17 1299 accept 0 ALIGNMENT 937 YS2-8m09.q1k chr02 31 1150 344396 345531 F 1120 95.98 1237 accept 0 ALIGNMENT 975 YS2-8m10.p1k chr16 1129 27 190066 191181 C 1103 97.19 1297 accept 0 ALIGNMENT 918 YS2-8m10.q1k chr16 30 1174 188108 189253 F 1145 94.50 1261 accept 0 ALIGNMENT 1044 YS2-8m11.p1k chr04 30 1223 1337140 1338339 F 1194 96.15 1267 accept 0 ALIGNMENT 908 YS2-8m11.q1k chr04 1085 38 1341347 1342410 C 1048 96.37 1193 accept 0 ALIGNMENT 0 YS2-8m12.q1k vc_4 62 486 5831 5830 F 425 0.00 527 reject_low 5 ALIGNMENT 419 YS2-8m12.q1k chr04 39 486 184084 184531 F 448 99.11 527 accept_chi 0 ALIGNMENT 41 YS2-8m12.q1k vc_3 527 487 2472 2512 C 41 100.00 527 reject_low 4 ALIGNMENT 36 YS2-8m12.q1k vc_5 524 489 1 36 C 36 100.00 527 reject_low 8 ALIGNMENT 0 YS2-8m12.q1k vc_1 486 62 2513 2512 C 425 0.00 527 reject_low 2 ALIGNMENT 38 YS2-8m12.q1k vc_7 490 527 13525 13562 F 38 100.00 527 reject_low 7 ALIGNMENT 41 YS2-8m12.q1k vc_2 527 487 2105 2145 C 41 100.00 527 reject_low 3 ALIGNMENT 0 YS2-8m12.q1k vc_5 488 62 5064 5063 C 427 0.00 527 reject_low 6 ALIGNMENT 41 YS2-8m12.q1k vc_1 527 487 2472 2512 C 41 100.00 527 reject_low 2 ALIGNMENT 0 YS2-8m12.q1k vc_2 486 62 2146 2145 C 425 0.00 527 reject_low 3 ALIGNMENT 39 YS2-8m12.q1k vc_5 527 489 5025 5063 C 39 100.00 527 reject_low 6 ALIGNMENT 414 YS2-8m12.p1k chr04 476 30 184084 184531 C 447 98.88 494 accept_chi 1 ALIGNMENT 0 YS2-8m12.p1k chr04 494 477 184085 184084 C 18 0.00 494 accept_chi 1 ALIGNMENT 0 YS2-8m12.q1k vc_7 62 489 13525 13524 F 428 0.00 527 reject_low 7 ALIGNMENT 0 YS2-8m12.q1k chr04 487 527 184531 184530 F 41 0.00 527 accept_chi 0 ALIGNMENT 41 YS2-8m12.q1k vc_4 487 527 5831 5871 F 41 100.00 527 reject_low 5 ALIGNMENT 0 YS2-8m12.q1k vc_5 488 62 37 36 C 427 0.00 527 reject_low 8 ALIGNMENT 0 YS2-8m12.q1k vc_3 486 62 2513 2512 C 425 0.00 527 reject_low 4 ALIGNMENT 162 YS2-8m13.p1k chr12 48 266 498958 499176 F 219 91.78 1274 reject_low 2 ALIGNMENT 0 YS2-8m13.p1k chr09 428 867 69530 69529 F 440 0.00 1274 reject_low 1 ALIGNMENT 113 YS2-8m13.p1k chr12 268 48 64977 65197 C 221 84.16 1274 reject_low 3 ALIGNMENT 304 YS2-8m13.p1k chr09 43 427 69146 69530 F 385 93.51 1274 reject_low 1 ALIGNMENT 0 YS2-8m13.p1k chr12 867 269 64978 64977 C 599 0.00 1274 reject_low 3 ALIGNMENT 104 YS2-8m13.p1k chr12 268 54 64521 64735 C 215 83.26 1274 reject_low 5 ALIGNMENT 0 YS2-8m13.p1k chr12 867 269 64750 64749 C 599 0.00 1274 reject_low 4 ALIGNMENT 832 YS2-8m13.q1k chr11 69 1126 613457 614513 F 1058 93.95 1126 accept 0 ALIGNMENT 0 YS2-8m13.p1k chr12 267 867 499176 499175 F 601 0.00 1274 reject_low 2 ALIGNMENT 0 YS2-8m13.p1k chr12 867 269 64522 64521 C 599 0.00 1274 reject_low 5 ALIGNMENT 111 YS2-8m13.p1k chr12 268 47 64749 64970 C 222 83.78 1274 reject_low 4 ALIGNMENT 873 YS2-8m13.p1k chr11 1062 28 617000 618036 C 1035 95.94 1274 accept 0 ALIGNMENT 1001 YS2-8m14.q1k chr06 40 1160 211108 212237 F 1121 96.97 1199 accept 0 ALIGNMENT 917 YS2-8m14.p1k chr06 1106 33 211387 212479 C 1074 96.46 1300 accept 0 ALIGNMENT 1018 YS2-8m15.p1k chr08 31 1235 169222 170427 F 1205 95.68 1247 accept 0 ALIGNMENT 390 YS2-8m15.q1k chr08 695 186 173408 173908 C 510 92.94 1012 accept 0 ALIGNMENT 0 YS2-8m16.q1k vc_3 162 62 2513 2512 C 101 0.00 203 reject_low 2 ALIGNMENT 0 YS2-8m16.q1k vc_5 164 62 37 36 C 103 0.00 203 reject_low 6 ALIGNMENT 41 YS2-8m16.q1k vc_3 203 163 2472 2512 C 41 100.00 203 reject_low 2 ALIGNMENT 0 YS2-8m16.q1k vc_1 162 62 2513 2512 C 101 0.00 203 reject_low 1 ALIGNMENT 0 YS2-8m16.q1k chr14 163 203 298652 298651 F 41 0.00 203 accept 0 ALIGNMENT 0 YS2-8m16.q1k vc_5 164 62 5064 5063 C 103 0.00 203 reject_low 4 ALIGNMENT 38 YS2-8m16.q1k vc_7 166 203 13525 13562 F 38 100.00 203 reject_low 5 ALIGNMENT 41 YS2-8m16.q1k vc_4 163 203 5831 5871 F 41 100.00 203 reject_low 3 ALIGNMENT 0 YS2-8m16.q1k vc_7 62 165 13525 13524 F 104 0.00 203 reject_low 5 ALIGNMENT 0 YS2-8m16.q1k vc_4 62 162 5831 5830 F 101 0.00 203 reject_low 3 ALIGNMENT 36 YS2-8m16.q1k vc_5 200 165 1 36 C 36 100.00 203 reject_low 6 ALIGNMENT 41 YS2-8m16.q1k vc_1 203 163 2472 2512 C 41 100.00 203 reject_low 1 ALIGNMENT 120 YS2-8m16.q1k chr14 32 162 298521 298652 F 131 98.47 203 accept 0 ALIGNMENT 39 YS2-8m16.q1k vc_5 203 165 5025 5063 C 39 100.00 203 reject_low 4 ALIGNMENT 963 YS2-8m17.p1k chr04 1236 27 666563 667773 C 1210 94.79 1240 accept 0 ALIGNMENT 1020 YS2-8m17.q1k chr04 38 1214 666285 667462 F 1177 96.77 1228 accept 0 ALIGNMENT 160 YS2-8m18.p1k chr04 40 217 179491 179668 F 178 98.88 218 accept_chi 1 ALIGNMENT 0 YS2-8m18.q1k vc_7 62 227 13525 13524 F 166 0.00 265 reject_low 7 ALIGNMENT 0 YS2-8m18.q1k vc_2 224 62 2146 2145 C 163 0.00 265 reject_low 3 ALIGNMENT 161 YS2-8m18.q1k chr04 224 40 179483 179668 C 185 97.84 265 accept_chi 0 ALIGNMENT 41 YS2-8m18.q1k vc_2 265 225 2105 2145 C 41 100.00 265 reject_low 3 ALIGNMENT 0 YS2-8m18.q1k vc_5 226 62 5064 5063 C 165 0.00 265 reject_low 6 ALIGNMENT 0 YS2-8m18.q1k vc_1 224 62 2513 2512 C 163 0.00 265 reject_low 2 ALIGNMENT 41 YS2-8m18.q1k vc_4 225 265 5831 5871 F 41 100.00 265 reject_low 5 ALIGNMENT 38 YS2-8m18.q1k vc_7 228 265 13525 13562 F 38 100.00 265 reject_low 7 ALIGNMENT 0 YS2-8m18.q1k vc_5 226 62 37 36 C 165 0.00 265 reject_low 8 ALIGNMENT 39 YS2-8m18.q1k vc_5 265 227 5025 5063 C 39 100.00 265 reject_low 6 ALIGNMENT 0 YS2-8m18.q1k chr04 265 225 179484 179483 C 41 0.00 265 accept_chi 0 ALIGNMENT 41 YS2-8m18.q1k vc_3 265 225 2472 2512 C 41 100.00 265 reject_low 4 ALIGNMENT 36 YS2-8m18.q1k vc_5 262 227 1 36 C 36 100.00 265 reject_low 8 ALIGNMENT 0 YS2-8m18.q1k vc_4 62 224 5831 5830 F 163 0.00 265 reject_low 5 ALIGNMENT 0 YS2-8m18.q1k vc_3 224 62 2513 2512 C 163 0.00 265 reject_low 4 ALIGNMENT 41 YS2-8m18.q1k vc_1 265 225 2472 2512 C 41 100.00 265 reject_low 2 ALIGNMENT 1032 YS2-8m19.p1k chr02 1214 29 105954 107152 C 1186 96.37 1226 accept 0 ALIGNMENT 898 YS2-8m19.q1k chr02 40 1094 103226 104281 F 1055 96.30 1142 accept 0 ALIGNMENT 957 YS2-8m21.q1k chr11 45 1144 307882 308984 F 1100 96.27 1155 accept 0 ALIGNMENT 993 YS2-8m21.p1k chr11 1163 34 308097 309234 C 1130 96.73 1182 accept 0 ALIGNMENT 36 YS2-8m22.q1k vc_5 695 660 1 36 C 36 100.00 698 reject_low 8 ALIGNMENT 40 YS2-8m22.q1k vc_3 698 659 2472 2511 C 40 100.00 698 reject_low 4 ALIGNMENT 39 YS2-8m22.q1k vc_5 698 660 5025 5063 C 39 100.00 698 reject_low 6 ALIGNMENT 0 YS2-8m22.q1k vc_4 62 658 5832 5831 F 597 0.00 698 reject_low 5 ALIGNMENT 0 YS2-8m22.q1k vc_2 658 62 2145 2144 C 597 0.00 698 reject_low 3 ALIGNMENT 0 YS2-8m22.q1k vc_5 659 62 37 36 C 598 0.00 698 reject_low 8 ALIGNMENT 0 YS2-8m22.q1k vc_5 659 62 5064 5063 C 598 0.00 698 reject_low 6 ALIGNMENT 40 YS2-8m22.q1k vc_1 698 659 2472 2511 C 40 100.00 698 reject_low 2 ALIGNMENT 0 YS2-8m22.p1k chr02 650 668 699142 699141 F 19 0.00 668 accept_chi 1 ALIGNMENT 603 YS2-8m22.p1k chr02 30 649 698522 699142 F 620 99.35 668 accept_chi 1 ALIGNMENT 40 YS2-8m22.q1k vc_2 698 659 2105 2144 C 40 100.00 698 reject_low 3 ALIGNMENT 38 YS2-8m22.q1k vc_7 661 698 13525 13562 F 38 100.00 698 reject_low 7 ALIGNMENT 0 YS2-8m22.q1k vc_1 658 62 2512 2511 C 597 0.00 698 reject_low 2 ALIGNMENT 0 YS2-8m22.q1k vc_3 658 62 2512 2511 C 597 0.00 698 reject_low 4 ALIGNMENT 0 YS2-8m22.q1k chr02 698 659 698523 698522 C 40 0.00 698 accept_chi 0 ALIGNMENT 40 YS2-8m22.q1k vc_4 659 698 5832 5871 F 40 100.00 698 reject_low 5 ALIGNMENT 609 YS2-8m22.q1k chr02 658 38 698522 699142 C 621 99.68 698 accept_chi 0 ALIGNMENT 0 YS2-8m22.q1k vc_7 62 660 13525 13524 F 599 0.00 698 reject_low 7 ALIGNMENT 996 YS2-8m24.q1k chr13 40 1108 660729 661795 F 1069 98.78 1111 accept 0 ALIGNMENT 970 YS2-8m24.p1k chr13 1190 37 663753 664915 C 1154 95.75 1199 accept 0 ALIGNMENT 0 YS2-8n01.q1k chr16 342 302 479037 479036 C 41 0.00 342 accept_chi 1 ALIGNMENT 0 YS2-8n01.q1k vc_4 62 301 5831 5830 F 240 0.00 342 reject_low 4 ALIGNMENT 0 YS2-8n01.q1k vc_3 301 62 2513 2512 C 240 0.00 342 reject_low 3 ALIGNMENT 0 YS2-8n01.p1k chr16 303 321 479311 479310 F 19 0.00 321 accept_chi 0 ALIGNMENT 0 YS2-8n01.q1k vc_5 303 62 37 36 C 242 0.00 342 reject_low 7 ALIGNMENT 41 YS2-8n01.q1k vc_4 302 342 5831 5871 F 41 100.00 342 reject_low 4 ALIGNMENT 36 YS2-8n01.q1k vc_5 339 304 1 36 C 36 100.00 342 reject_low 7 ALIGNMENT 38 YS2-8n01.q1k vc_7 305 342 13525 13562 F 38 100.00 342 reject_low 6 ALIGNMENT 0 YS2-8n01.q1k vc_1 301 62 2513 2512 C 240 0.00 342 reject_low 2 ALIGNMENT 0 YS2-8n01.q1k vc_5 303 62 5064 5063 C 242 0.00 342 reject_low 5 ALIGNMENT 41 YS2-8n01.q1k vc_1 342 302 2472 2512 C 41 100.00 342 reject_low 2 ALIGNMENT 267 YS2-8n01.p1k chr16 27 302 479036 479311 F 276 100.00 321 accept_chi 0 ALIGNMENT 260 YS2-8n01.q1k chr16 301 29 479036 479309 C 273 99.63 342 accept_chi 1 ALIGNMENT 41 YS2-8n01.q1k vc_3 342 302 2472 2512 C 41 100.00 342 reject_low 3 ALIGNMENT 0 YS2-8n01.q1k vc_7 62 304 13525 13524 F 243 0.00 342 reject_low 6 ALIGNMENT 39 YS2-8n01.q1k vc_5 342 304 5025 5063 C 39 100.00 342 reject_low 5 ALIGNMENT 502 YS2-8n03.p1k chr05 651 27 163744 164369 C 625 94.24 1342 accept 0 ALIGNMENT 674 YS2-8n03.q1k chr05 36 856 159040 159848 F 821 95.37 1258 accept 0 ALIGNMENT 0 YS2-8n07.q1k vc_7 53 54 5172 6360 C 0 0.00 662 reject_low 8 ALIGNMENT 0 YS2-8n07.q1k vc_4 237 62 6340 6339 C 176 0.00 662 reject_low 10 ALIGNMENT 0 YS2-8n07.q1k vc_4 305 307 1615 1878 F 3 0.00 662 reject_vc 7 ALIGNMENT 302 YS2-8n07.q1k vc_1 1 303 2689 2991 F 303 100.00 662 reject_vc 4 ALIGNMENT 162 YS2-8n07.q1k vc_4 308 619 1879 2200 F 312 83.97 662 reject_vc 7 ALIGNMENT 65 YS2-8n07.q1k vc_4 304 238 46 112 C 67 100.00 662 reject_low 9 ALIGNMENT 81 YS2-8n07.q1k vc_7 408 305 4596 4699 C 104 94.23 662 reject_low 8 ALIGNMENT 378 YS2-8n07.q1k vc_4 412 1 5240 5654 C 412 97.82 662 reject_vc 3 ALIGNMENT 0 YS2-8n07.q1k vc_4 237 62 113 112 C 176 0.00 662 reject_low 9 ALIGNMENT 51 YS2-8n07.q1k vc_7 54 3 6360 6411 C 52 100.00 662|1,0 reject_low 8 ALIGNMENT 470 YS2-8n07.q1k vc_5 1 619 2556 3184 F 619 91.92 662 reject_vc 1 ALIGNMENT 302 YS2-8n07.q1k vc_2 1 303 2322 2624 F 303 100.00 662 reject_vc 5 ALIGNMENT 0 YS2-8n07.q1k vc_4 62 237 1548 1547 F 176 0.00 662 reject_vc 7 ALIGNMENT 0 YS2-8n07.q1k vc_7 304 304 4700 4921 C 1 0.00 662 reject_low 8 ALIGNMENT 470 YS2-8n07.q1k vc_7 619 1 1941 2569 C 619 91.76 662 reject_vc 2 ALIGNMENT 247 YS2-8n07.q1k vc_7 303 53 4922 5172 C 251 99.60 662|0,1 reject_low 8 ALIGNMENT 314 YS2-8n07.p1k chr09 370 34 99434 99771 C 337 97.92 388 accept 0 ALIGNMENT 0 YS2-8n07.p1k chr09 388 371 99435 99434 C 18 0.00 388 accept 0 ALIGNMENT 302 YS2-8n07.q1k vc_3 1 303 2689 2991 F 303 100.00 662 reject_vc 6 ALIGNMENT 65 YS2-8n07.q1k vc_4 304 238 6273 6339 C 67 100.00 662 reject_low 10 ALIGNMENT 65 YS2-8n07.q1k vc_4 238 304 1548 1614 F 67 100.00 662 reject_vc 7 ALIGNMENT 0 YS2-8n08.q1k chrm 883 130 5200 5199 C 754 0.00 1190 reject_low 3 ALIGNMENT 0 YS2-8n08.q1k chrm 122 883 40434 40433 F 762 0.00 1190 reject_low 5 ALIGNMENT 0 YS2-8n08.q1k chrm 883 141 2537 2536 C 743 0.00 1190 reject_low 1 ALIGNMENT 40 YS2-8n08.q1k chrm 140 74 2536 2605 C 67 89.55 1190 reject_low 1 ALIGNMENT 33 YS2-8n08.q1k chrm 121 74 50727 50775 C 48 91.67 1190 reject_low 6 ALIGNMENT 0 YS2-8n08.q1k chrm 883 122 50728 50727 C 762 0.00 1190 reject_low 6 ALIGNMENT 23 YS2-8n08.q1k chrm 61 90 77878 77907 F 30 93.33 1190 reject_low 2 ALIGNMENT 43 YS2-8n08.q1k chrm 74 121 34194 34241 F 48 97.92 1190 reject_low 4 ALIGNMENT 806 YS2-8n08.p1k chrm 1088 37 74087 75147 C 1052 97.05 1357 accept 0 ALIGNMENT 37 YS2-8n08.q1k chrm 129 74 5199 5255 C 56 91.07 1190 reject_low 3 ALIGNMENT 0 YS2-8n08.q1k chrm 122 883 34241 34240 F 762 0.00 1190 reject_low 4 ALIGNMENT 29 YS2-8n08.q1k chrm 121 74 68613 68665 C 48 89.58 1190 reject_low 7 ALIGNMENT 674 YS2-8n08.q1k chrm 39 1087 73431 74494 F 1049 92.56 1190 accept 0 ALIGNMENT 0 YS2-8n08.q1k chrm 883 122 68614 68613 C 762 0.00 1190 reject_low 7 ALIGNMENT 0 YS2-8n08.q1k chrm 91 883 77907 77906 F 793 0.00 1190 reject_low 2 ALIGNMENT 42 YS2-8n08.q1k chrm 75 121 40388 40434 F 47 97.87 1190 reject_low 5 ALIGNMENT 550 YS2-8n09.q1k chr05 705 34 238065 238727 C 672 95.98 1242 accept 0 ALIGNMENT 881 YS2-8n09.p1k chr05 33 1019 234382 235381 F 987 97.47 1229 accept 0 ALIGNMENT 0 YS2-8n10.q1k chr12 578 154 489755 489754 C 425 0.00 1206 reject_low 3 ALIGNMENT 510 YS2-8n10.q1k chr12 669 35 460394 461042 C 635 95.43 1206 reject_bad_break 0 ALIGNMENT 22 YS2-8n10.q1k chr12 760 670 460302 460384 C 91 82.42 1206 reject_bad_break 0 ALIGNMENT 0 YS2-8n10.q1k chr12 578 509 451420 451419 C 70 0.00 1206 reject_low 2 ALIGNMENT 0 YS2-8n10.q1k chr12 669 670 460385 460393 C 0 0.00 1206 reject_bad_break 0 ALIGNMENT 374 YS2-8n10.q1k chr12 508 35 451419 451905 C 474 95.15 1206 reject_low 2 ALIGNMENT 972 YS2-8n10.p1k chr12 34 1192 456225 457393 F 1159 94.48 1314 reject_bad_break 0 ALIGNMENT 961 YS2-8n10.p1k chr12 34 1124 465362 466458 F 1091 95.69 1314 reject_low 1 ALIGNMENT 104 YS2-8n10.q1k chr12 153 35 489754 489873 C 119 97.48 1206 reject_low 3 ALIGNMENT 952 YS2-8n11.p1k chr16 27 1127 64874 65990 F 1101 96.19 1246 accept_chi 0 ALIGNMENT 258 YS2-8n11.q1k chr08 530 4 470447 470962 C 527 84.82 1447 accept_chi 1 ALIGNMENT 1001 YS2-8n12.q1k chr13 1199 39 141006 142170 C 1161 96.90 1206 accept 0 ALIGNMENT 984 YS2-8n12.p1k chr13 29 1187 139796 140975 F 1159 96.38 1276 accept 0 ALIGNMENT 128 YS2-8n13.q1k vc_4 371 162 5604 5812 C 210 88.10 1264 reject_low 5 ALIGNMENT 63 YS2-8n13.q1k vc_4 250 162 1446 1534 C 89 92.13 1264 reject_low 8 ALIGNMENT 108 YS2-8n13.q1k vc_4 162 323 126 287 F 162 90.12 1264 reject_low 6 ALIGNMENT 25 YS2-8n13.q1k vc_5 159 124 1 35 C 36 91.67 1264 reject_low 12 ALIGNMENT 130 YS2-8n13.q1k vc_5 162 430 2398 2661 F 269 84.76 1264 reject_low 3 ALIGNMENT 95 YS2-8n13.q1k chr09 119 7 224351 224463 C 113 96.46 1264 accept 0 ALIGNMENT 108 YS2-8n13.q1k vc_4 162 323 6353 6514 F 162 90.12 1264|1,0 reject_low 7 ALIGNMENT 0 YS2-8n13.q1k vc_4 163 162 5872 6353 F 0 0.00 1264 reject_low 7 ALIGNMENT 130 YS2-8n13.q1k vc_7 430 162 2464 2727 C 269 84.76 1264 reject_low 4 ALIGNMENT 28 YS2-8n13.q1k vc_1 162 124 2472 2509 C 39 92.31 1264 reject_low 9 ALIGNMENT 28 YS2-8n13.q1k vc_3 162 124 2472 2509 C 39 92.31 1264 reject_low 10 ALIGNMENT 130 YS2-8n13.q1k vc_1 162 430 2531 2794 F 269 84.76 1264 reject_low 1 ALIGNMENT 28 YS2-8n13.q1k vc_5 162 124 5025 5062 C 39 92.31 1264 reject_low 11 ALIGNMENT 28 YS2-8n13.q1k vc_4 124 162 5834 5871 F 39 92.31 1264 reject_low 7 ALIGNMENT 130 YS2-8n13.q1k vc_3 162 430 2531 2794 F 269 84.76 1264 reject_low 2 ALIGNMENT 0 YS2-8n14.p1k chr10 916 470 736117 736116 C 447 0.00 1324 reject_low 2 ALIGNMENT 0 YS2-8n14.p1k chr04 62 214 9342 9341 F 153 0.00 1324 reject_low 3 ALIGNMENT 0 YS2-8n14.p1k chr10 214 62 736374 736373 C 153 0.00 1324 reject_low 2 ALIGNMENT 0 YS2-8n14.p1k chr05 62 870 18809 18808 F 809 0.00 1324 reject_low 1 ALIGNMENT 0 YS2-8n14.q1k chr10 137 856 734754 734753 F 720 0.00 1187 reject_low 2 ALIGNMENT 0 YS2-8n14.p1k chr04 470 916 9599 9598 F 447 0.00 1324 reject_low 3 ALIGNMENT 31 YS2-8n14.q1k chr10 46 136 734664 734754 F 91 78.02 1187 reject_low 2 ALIGNMENT 75 YS2-8n14.p1k chr04 215 469 9342 9599 F 255 77.65 1324 reject_low 3 ALIGNMENT 23 YS2-8n14.p1k chr05 871 905 18809 18843 F 35 88.57 1324 reject_low 1 ALIGNMENT 722 YS2-8n14.q1k chr05 1011 39 19208 20181 C 973 92.60 1187 reject_low 1 ALIGNMENT 75 YS2-8n14.p1k chr10 469 215 736116 736373 C 255 77.65 1324 reject_low 2 ALIGNMENT 797 YS2-8n14.q1k chr14 39 1050 775708 776722 F 1012 93.68 1187 accept_tel 0 ALIGNMENT 29 YS2-8n14.p1k chr05 933 999 18888 18956 F 67 77.61 1324 reject_low 1 ALIGNMENT 0 YS2-8n14.p1k chr05 906 932 18844 18887 F 27 0.00 1324 reject_low 1 ALIGNMENT 0 YS2-8n15.q1k vc_5 241 62 5064 5063 C 180 0.00 1312 reject_low 15 ALIGNMENT 0 YS2-8n15.q1k vc_4 442 488 287 286 F 47 0.00 1312 reject_low 8 ALIGNMENT 0 YS2-8n15.q1k vc_1 488 281 2473 2472 C 208 0.00 1312 reject_low 12 ALIGNMENT 0 YS2-8n15.q1k vc_4 281 280 5872 6353 F 0 0.00 1312 reject_low 9 ALIGNMENT 0 YS2-8n15.p1k chr10 226 243 428716 428715 F 18 0.00 243 accept_chi 1 ALIGNMENT 113 YS2-8n15.q1k vc_7 703 490 4963 5172 C 214 85.98 1312|0,1 reject_low 10 ALIGNMENT 38 YS2-8n15.q1k vc_7 243 280 13525 13562 F 38 100.00 1312 reject_low 17 ALIGNMENT 0 YS2-8n15.q1k vc_7 439 62 6412 6411 C 378 0.00 1312 reject_low 10 ALIGNMENT 0 YS2-8n15.q1k vc_1 62 279 2531 2530 F 218 0.00 1312 reject_low 3 ALIGNMENT 0 YS2-8n15.q1k vc_1 239 62 2513 2512 C 178 0.00 1312 reject_low 12 ALIGNMENT 36 YS2-8n15.q1k vc_5 277 242 1 36 C 36 100.00 1312 reject_low 18 ALIGNMENT 309 YS2-8n15.q1k vc_4 703 280 5391 5812 C 424 91.98 1312 reject_low 7 ALIGNMENT 0 YS2-8n15.q1k vc_7 62 242 13525 13524 F 181 0.00 1312 reject_low 17 ALIGNMENT 41 YS2-8n15.q1k vc_4 240 280 5831 5871 F 41 100.00 1312 reject_low 9 ALIGNMENT 0 YS2-8n15.q1k chr10 488 240 428512 428511 C 249 0.00 1312 accept_chi 0 ALIGNMENT 0 YS2-8n15.q1k vc_7 279 62 2728 2727 C 218 0.00 1312 reject_low 2 ALIGNMENT 315 YS2-8n15.q1k vc_2 280 703 2164 2583 F 424 92.45 1312 reject_low 4 ALIGNMENT 0 YS2-8n15.q1k vc_7 281 488 100 99 F 208 0.00 1312 reject_low 16 ALIGNMENT 0 YS2-8n15.q1k vc_2 488 281 2106 2105 C 208 0.00 1312 reject_low 13 ALIGNMENT 0 YS2-8n15.q1k vc_2 239 62 2146 2145 C 178 0.00 1312 reject_low 13 ALIGNMENT 315 YS2-8n15.q1k vc_5 280 703 2398 2817 F 424 92.45 1312 reject_low 6 ALIGNMENT 0 YS2-8n15.q1k vc_7 281 488 13562 13561 F 208 0.00 1312 reject_low 17 ALIGNMENT 48 YS2-8n15.q1k vc_7 491 440 6360 6411 C 52 98.08 1312|1,0 reject_low 10 ALIGNMENT 154 YS2-8n15.q1k vc_4 280 441 126 287 F 162 98.77 1312 reject_low 8 ALIGNMENT 39 YS2-8n15.q1k vc_5 280 242 5025 5063 C 39 100.00 1312 reject_low 15 ALIGNMENT 0 YS2-8n15.q1k vc_5 488 281 5026 5025 C 208 0.00 1312 reject_low 15 ALIGNMENT 0 YS2-8n15.q1k vc_5 241 62 37 36 C 180 0.00 1312 reject_low 18 ALIGNMENT 186 YS2-8n15.p1k chr10 27 225 428517 428716 F 199 99.50 243 accept_chi 1 ALIGNMENT 0 YS2-8n15.q1k vc_4 279 62 1535 1534 C 218 0.00 1312 reject_low 11 ALIGNMENT 316 YS2-8n15.q1k vc_7 703 280 2308 2727 C 424 92.45 1312 reject_low 2 ALIGNMENT 84 YS2-8n15.q1k vc_4 368 280 1446 1534 C 89 98.88 1312 reject_low 11 ALIGNMENT 0 YS2-8n15.q1k vc_3 62 279 2531 2530 F 218 0.00 1312 reject_low 5 ALIGNMENT 315 YS2-8n15.q1k vc_3 280 703 2531 2950 F 424 92.45 1312 reject_low 5 ALIGNMENT 154 YS2-8n15.q1k vc_4 280 441 6353 6514 F 162 98.77 1312|1,0 reject_low 9 ALIGNMENT 0 YS2-8n15.q1k vc_4 62 279 126 125 F 218 0.00 1312 reject_low 8 ALIGNMENT 0 YS2-8n15.q1k vc_7 490 491 5172 6360 C 0 0.00 1312 reject_low 10 ALIGNMENT 315 YS2-8n15.q1k vc_1 280 703 2531 2950 F 424 92.45 1312 reject_low 3 ALIGNMENT 41 YS2-8n15.q1k vc_2 280 240 2105 2145 C 41 100.00 1312 reject_low 13 ALIGNMENT 0 YS2-8n15.q1k vc_4 442 488 6514 6513 F 47 0.00 1312 reject_low 9 ALIGNMENT 0 YS2-8n15.q1k vc_2 62 279 2164 2163 F 218 0.00 1312 reject_low 4 ALIGNMENT 0 YS2-8n15.q1k vc_5 62 279 2398 2397 F 218 0.00 1312 reject_low 6 ALIGNMENT 0 YS2-8n15.q1k vc_4 279 62 5813 5812 C 218 0.00 1312 reject_low 7 ALIGNMENT 41 YS2-8n15.q1k vc_3 280 240 2472 2512 C 41 100.00 1312 reject_low 14 ALIGNMENT 0 YS2-8n15.q1k vc_4 62 239 5831 5830 F 178 0.00 1312 reject_low 9 ALIGNMENT 0 YS2-8n15.q1k vc_3 239 62 2513 2512 C 178 0.00 1312 reject_low 14 ALIGNMENT 0 YS2-8n15.q1k vc_3 488 281 2473 2472 C 208 0.00 1312 reject_low 14 ALIGNMENT 41 YS2-8n15.q1k vc_1 280 240 2472 2512 C 41 100.00 1312 reject_low 12 ALIGNMENT 0 YS2-8n15.q1k vc_7 62 242 63 62 F 181 0.00 1312 reject_low 16 ALIGNMENT 0 YS2-8n15.q1k vc_4 488 369 1447 1446 C 120 0.00 1312 reject_low 11 ALIGNMENT 0 YS2-8n15.q1k vc_5 488 278 2 1 C 211 0.00 1312 reject_low 18 ALIGNMENT 197 YS2-8n15.q1k chr10 239 34 428511 428716 C 206 100.00 1312 accept_chi 0 ALIGNMENT 38 YS2-8n15.q1k vc_7 243 280 63 100 F 38 100.00 1312 reject_low 16 ALIGNMENT 1082 YS2-8n16.p1k chr11 37 1259 318532 319761 F 1223 96.40 1272 accept 0 ALIGNMENT 1041 YS2-8n16.q1k chr11 1249 36 319097 320312 C 1214 96.05 1262 accept 0 ALIGNMENT 41 YS2-8n18.q1k vc_3 314 274 2472 2512 C 41 100.00 314 reject_low 5 ALIGNMENT 0 YS2-8n18.q1k vc_5 275 62 37 36 C 214 0.00 314 reject_low 9 ALIGNMENT 0 YS2-8n18.q1k vc_5 275 62 5064 5063 C 214 0.00 314 reject_low 7 ALIGNMENT 235 YS2-8n18.p1k chr12 264 29 453552 453787 C 236 100.00 282 reject_low 1 ALIGNMENT 0 YS2-8n18.q1k vc_2 273 62 2146 2145 C 212 0.00 314 reject_low 4 ALIGNMENT 0 YS2-8n18.q1k vc_1 273 62 2513 2512 C 212 0.00 314 reject_low 3 ALIGNMENT 235 YS2-8n18.q1k chr12 40 275 453552 453787 F 236 100.00 314 accept 0 ALIGNMENT 0 YS2-8n18.q1k chr12 276 314 453787 453786 F 39 0.00 314 accept 0 ALIGNMENT 41 YS2-8n18.q1k vc_4 274 314 5831 5871 F 41 100.00 314 reject_low 6 ALIGNMENT 0 YS2-8n18.p1k chr12 282 265 453553 453552 C 18 0.00 282 reject_low 1 ALIGNMENT 0 YS2-8n18.q1k vc_3 273 62 2513 2512 C 212 0.00 314 reject_low 5 ALIGNMENT 36 YS2-8n18.q1k vc_5 311 276 1 36 C 36 100.00 314 reject_low 9 ALIGNMENT 0 YS2-8n18.p1k chr12 282 265 462690 462689 C 18 0.00 282 accept 0 ALIGNMENT 0 YS2-8n18.q1k chr12 276 314 462924 462923 F 39 0.00 314 reject_low 2 ALIGNMENT 41 YS2-8n18.q1k vc_1 314 274 2472 2512 C 41 100.00 314 reject_low 3 ALIGNMENT 235 YS2-8n18.q1k chr12 40 275 462689 462924 F 236 100.00 314 reject_low 2 ALIGNMENT 235 YS2-8n18.p1k chr12 264 29 462689 462924 C 236 100.00 282 accept 0 ALIGNMENT 39 YS2-8n18.q1k vc_5 314 276 5025 5063 C 39 100.00 314 reject_low 7 ALIGNMENT 0 YS2-8n18.q1k vc_4 62 273 5831 5830 F 212 0.00 314 reject_low 6 ALIGNMENT 0 YS2-8n18.q1k vc_7 62 276 13525 13524 F 215 0.00 314 reject_low 8 ALIGNMENT 41 YS2-8n18.q1k vc_2 314 274 2105 2145 C 41 100.00 314 reject_low 4 ALIGNMENT 38 YS2-8n18.q1k vc_7 277 314 13525 13562 F 38 100.00 314 reject_low 8 ALIGNMENT 101 YS2-8n19.q1k chr03 842 1079 307696 307946 F 238 81.51 1228 reject_low 14 ALIGNMENT 116 YS2-8n19.q1k chr07 1149 898 6439 6697 C 252 82.54 1228 reject_low 21 ALIGNMENT 0 YS2-8n19.p1k chr16 164 907 7275 7274 F 744 0.00 1267 reject_low 22 ALIGNMENT 241 YS2-8n19.p1k chr05 32 430 6392 6791 F 399 88.97 1267 reject_low 9 ALIGNMENT 0 YS2-8n19.q1k chr15 897 62 11956 11955 C 836 0.00 1228 reject_low 12 ALIGNMENT 0 YS2-8n19.p1k chr09 164 907 7836 7835 F 744 0.00 1267 reject_low 15 ALIGNMENT 106 YS2-8n19.q1k chr05 833 1149 63624 63941 F 317 79.18 1228 reject_low 20 ALIGNMENT 69 YS2-8n19.p1k chr15 32 163 766 898 F 132 89.39 1267 reject_low 12 ALIGNMENT 0 YS2-8n19.q1k chr07 897 62 6698 6697 C 836 0.00 1228 reject_low 21 ALIGNMENT 59 YS2-8n19.p1k chr03 163 32 315727 315860 C 132 87.12 1267 reject_low 14 ALIGNMENT 123 YS2-8n19.q1k chr04 909 1149 1523198 1523445 F 241 84.23 1228 reject_low 18 ALIGNMENT 0 YS2-8n19.p1k chr01 164 907 853 852 F 744 0.00 1267 reject_low 19 ALIGNMENT 0 YS2-8n19.q1k chr12 1001 974 222992 223028 C 28 0.00 1228 reject_low 27 ALIGNMENT 900 YS2-8n19.p1k chr04 31 1167 822 1956 F 1137 94.46 1267 reject_low 5 ALIGNMENT 637 YS2-8n19.p1k chr07 1142 32 1082607 1083721 C 1111 87.49 1267 reject_low 1 ALIGNMENT 0 YS2-8n19.p1k chr03 907 164 315728 315727 C 744 0.00 1267 reject_low 14 ALIGNMENT 928 YS2-8n19.p1k chr02 1237 31 811247 812455 C 1207 93.70 1267 accept_tel 0 ALIGNMENT 0 YS2-8n19.q1k chr12 62 897 1062871 1062870 F 836 0.00 1228 reject_low 17 ALIGNMENT 57 YS2-8n19.p1k chr12 163 31 1064226 1064360 C 133 86.47 1267 reject_low 17 ALIGNMENT 0 YS2-8n19.p1k chr10 164 907 7819 7818 F 744 0.00 1267 reject_low 16 ALIGNMENT 514 YS2-8n19.p1k chr09 1142 32 438048 439146 C 1111 84.43 1267 reject_low 8 ALIGNMENT 0 YS2-8n19.q1k chr10 897 62 9184 9183 C 836 0.00 1228 reject_low 16 ALIGNMENT 63 YS2-8n19.p1k chr10 31 163 7685 7819 F 133 87.97 1267 reject_low 16 ALIGNMENT 125 YS2-8n19.q1k chr12 898 1149 1062871 1063129 F 252 83.73 1228 reject_low 17 ALIGNMENT 0 YS2-8n19.p1k chr05 431 907 6791 6790 F 477 0.00 1267 reject_low 9 ALIGNMENT 128 YS2-8n19.q1k chr10 1149 898 8925 9183 C 252 84.13 1228 reject_low 16 ALIGNMENT 0 YS2-8n19.q1k chr12 841 62 13547 13546 C 780 0.00 1228 reject_low 10 ALIGNMENT 956 YS2-8n19.p1k chr10 1237 31 743688 744899 C 1207 94.37 1267 reject_low 2 ALIGNMENT 0 YS2-8n19.q1k chr04 62 908 1523198 1523197 F 847 0.00 1228 reject_low 18 ALIGNMENT 0 YS2-8n19.p1k chr11 164 907 859 858 F 744 0.00 1267 reject_low 26 ALIGNMENT 928 YS2-8n19.p1k chr13 31 1237 6262 7470 F 1207 93.70 1267 reject_low 3 ALIGNMENT 117 YS2-8n19.q1k chr01 1149 898 1956 2214 C 252 83.33 1228 reject_low 19 ALIGNMENT 60 YS2-8n19.p1k chr11 44 163 739 859 F 120 88.33 1267 reject_low 26 ALIGNMENT 128 YS2-8n19.q1k chr09 1149 898 8942 9200 C 252 84.13 1228 reject_low 15 ALIGNMENT 21 YS2-8n19.q1k chr12 973 943 223029 223060 C 31 90.32 1228 reject_low 27 ALIGNMENT 110 YS2-8n19.q1k chr08 1149 923 12070 12303 C 227 83.70 1228 reject_low 6 ALIGNMENT 0 YS2-8n19.p1k chr03 164 907 1149 1148 F 744 0.00 1267 reject_low 25 ALIGNMENT 156 YS2-8n19.q1k chr02 1149 842 7754 8069 C 308 84.74 1228 reject_low 13 ALIGNMENT 0 YS2-8n19.q1k chr08 922 62 12304 12303 C 861 0.00 1228 reject_low 6 ALIGNMENT 0 YS2-8n19.q1k chr03 62 841 307696 307695 F 780 0.00 1228 reject_low 14 ALIGNMENT 47 YS2-8n19.p1k chr01 32 163 720 853 F 132 84.09 1267 reject_low 19 ALIGNMENT 797 YS2-8n19.p1k chr08 31 1142 5422 6528 F 1112 91.91 1267 reject_low 6 ALIGNMENT 0 YS2-8n19.q1k chr01 897 62 2215 2214 C 836 0.00 1228 reject_low 19 ALIGNMENT 33 YS2-8n19.q1k chr12 1149 1002 222838 222991 C 148 74.32 1228 reject_low 27 ALIGNMENT 0 YS2-8n19.q1k chr09 62 841 433825 433824 F 780 0.00 1228 reject_low 8 ALIGNMENT 909 YS2-8n19.p1k chr14 31 1237 7346 8556 F 1207 93.21 1267 reject_low 4 ALIGNMENT 1011 YS2-8n19.q1k chr02 35 1218 808144 809337 F 1184 95.61 1228 accept_tel 0 ALIGNMENT 0 YS2-8n19.q1k chr02 841 62 8070 8069 C 780 0.00 1228 reject_low 13 ALIGNMENT 0 YS2-8n19.q1k chr14 62 841 781817 781816 F 780 0.00 1228 reject_low 11 ALIGNMENT 63 YS2-8n19.p1k chr03 32 163 1017 1149 F 132 87.88 1267 reject_low 25 ALIGNMENT 39 YS2-8n19.p1k chr16 33 163 7143 7275 F 131 82.44 1267 reject_low 22 ALIGNMENT 70 YS2-8n19.q1k chr13 899 1149 922595 922861 F 251 77.29 1228 reject_low 23 ALIGNMENT 0 YS2-8n19.p1k chr04 907 164 1524557 1524556 C 744 0.00 1267 reject_low 18 ALIGNMENT 0 YS2-8n19.q1k chr16 897 62 8353 8352 C 836 0.00 1228 reject_low 22 ALIGNMENT 72 YS2-8n19.p1k chr05 163 32 569543 569675 C 132 90.15 1267 reject_low 24 ALIGNMENT 121 YS2-8n19.q1k chr15 1218 898 11624 11955 C 321 80.69 1228 reject_low 12 ALIGNMENT 60 YS2-8n19.p1k chr04 163 31 1524556 1524690 C 133 87.22 1267 reject_low 18 ALIGNMENT 690 YS2-8n19.p1k chr06 31 1167 5448 6580 F 1137 88.74 1267 reject_low 7 ALIGNMENT 0 YS2-8n19.p1k chr05 907 164 569544 569543 C 744 0.00 1267 reject_low 24 ALIGNMENT 0 YS2-8n19.q1k chr12 942 62 223061 223060 C 881 0.00 1228 reject_low 27 ALIGNMENT 0 YS2-8n19.q1k chr13 62 898 922595 922594 F 837 0.00 1228 reject_low 23 ALIGNMENT 0 YS2-8n19.p1k chr15 164 907 898 897 F 744 0.00 1267 reject_low 12 ALIGNMENT 68 YS2-8n19.q1k chr16 1149 898 8085 8352 C 252 77.38 1228 reject_low 22 ALIGNMENT 0 YS2-8n19.q1k chr09 897 62 9201 9200 C 836 0.00 1228 reject_low 15 ALIGNMENT 173 YS2-8n19.q1k chr14 842 1218 781817 782204 F 377 82.76 1228 reject_low 11 ALIGNMENT 63 YS2-8n19.p1k chr09 31 163 7702 7836 F 133 87.97 1267 reject_low 15 ALIGNMENT 0 YS2-8n19.p1k chr12 907 164 1064227 1064226 C 744 0.00 1267 reject_low 17 ALIGNMENT 941 YS2-8n19.q1k chr07 35 1149 1079404 1080525 F 1115 95.25 1228 reject_low 1 ALIGNMENT 68 YS2-8n19.q1k chr09 842 1149 433825 434147 F 308 75.32 1228 reject_low 8 ALIGNMENT 0 YS2-8n19.q1k chr05 62 832 63624 63623 F 771 0.00 1228 reject_low 20 ALIGNMENT 173 YS2-8n19.q1k chr12 1218 842 13159 13546 C 377 82.76 1228 reject_low 10 ALIGNMENT 0 YS2-8n22.p1k chr11 963 62 74713 74712 C 902 0.00 1191 reject_low 9 ALIGNMENT 999 YS2-8n22.p1k chr16 1152 25 810560 811695 C 1128 96.72 1191 accept_chi 1 ALIGNMENT 56 YS2-8n22.p1k chr14 1045 965 102717 102798 C 81 87.65 1191 reject_low 7 ALIGNMENT 54 YS2-8n22.p1k chr03 1045 973 127714 127787 C 73 89.04 1191 reject_low 10 ALIGNMENT 0 YS2-8n22.p1k chr12 62 964 975970 975969 F 903 0.00 1191 reject_low 6 ALIGNMENT 889 YS2-8n22.q1k chr05 1087 31 479451 480505 C 1057 96.22 1096 accept_chi 0 ALIGNMENT 56 YS2-8n22.p1k chr12 965 1045 975970 976051 F 81 87.65 1191 reject_low 6 ALIGNMENT 0 YS2-8n22.p1k chr14 965 62 632683 632682 C 904 0.00 1191 reject_low 4 ALIGNMENT 0 YS2-8n22.p1k chr03 972 62 127788 127787 C 911 0.00 1191 reject_low 10 ALIGNMENT 56 YS2-8n22.p1k chr15 1045 964 487441 487524 C 82 87.80 1191 reject_low 5 ALIGNMENT 56 YS2-8n22.p1k chr07 1045 968 731143 731221 C 78 88.46 1191 reject_low 2 ALIGNMENT 56 YS2-8n22.p1k chr15 1045 967 228330 228410 C 79 88.61 1191 reject_low 8 ALIGNMENT 59 YS2-8n22.p1k chr06 952 1045 137459 137553 F 94 86.17 1191 reject_low 3 ALIGNMENT 0 YS2-8n22.p1k chr15 966 62 228411 228410 C 905 0.00 1191 reject_low 8 ALIGNMENT 58 YS2-8n22.p1k chr14 1045 966 632602 632682 C 80 88.75 1191 reject_low 4 ALIGNMENT 56 YS2-8n22.p1k chr07 582 30 731617 732169 C 553 70.71 1191 reject_low 2 ALIGNMENT 0 YS2-8n22.p1k chr14 964 62 102799 102798 C 903 0.00 1191 reject_low 7 ALIGNMENT 0 YS2-8n22.p1k chr07 967 583 731222 731616 C 385 0.00 1191 reject_low 2 ALIGNMENT 0 YS2-8n22.p1k chr15 963 62 487525 487524 C 902 0.00 1191 reject_low 5 ALIGNMENT 0 YS2-8n22.p1k chr06 62 951 137459 137458 F 890 0.00 1191 reject_low 3 ALIGNMENT 54 YS2-8n22.p1k chr11 1045 964 74630 74712 C 82 86.59 1191 reject_low 9 ALIGNMENT 1010 YS2-8n23.p1k chr13 25 1183 265504 266665 F 1159 96.64 1196 accept 0 ALIGNMENT 953 YS2-8n23.q1k chr13 1119 38 266156 267233 C 1082 97.32 1119 accept 0 ALIGNMENT 881 YS2-8n24.q1k chr07 1031 39 418870 419852 C 993 97.68 1133 accept 0 ALIGNMENT 994 YS2-8n24.p1k chr07 29 1165 413833 414979 F 1137 96.31 1192 accept 0 ALIGNMENT 553 YS2-8o02.p1k chr14 998 215 420324 421104 C 784 91.58 1363 accept 0 ALIGNMENT 39 YS2-8o03.q1k vc_5 260 222 5025 5063 C 39 100.00 260 reject_low 6 ALIGNMENT 0 YS2-8o03.q1k chr07 260 220 795750 795749 C 41 0.00 260 accept_chi 1 ALIGNMENT 169 YS2-8o03.p1k chr07 31 209 795749 795927 F 179 98.88 227 accept_chi 0 ALIGNMENT 0 YS2-8o03.p1k chr07 210 227 795927 795926 F 18 0.00 227 accept_chi 0 ALIGNMENT 0 YS2-8o03.q1k vc_7 62 222 13525 13524 F 161 0.00 260 reject_low 7 ALIGNMENT 0 YS2-8o03.q1k vc_1 219 62 2513 2512 C 158 0.00 260 reject_low 2 ALIGNMENT 0 YS2-8o03.q1k vc_5 221 62 5064 5063 C 160 0.00 260 reject_low 6 ALIGNMENT 41 YS2-8o03.q1k vc_2 260 220 2105 2145 C 41 100.00 260 reject_low 3 ALIGNMENT 41 YS2-8o03.q1k vc_1 260 220 2472 2512 C 41 100.00 260 reject_low 2 ALIGNMENT 0 YS2-8o03.q1k vc_5 221 62 37 36 C 160 0.00 260 reject_low 8 ALIGNMENT 41 YS2-8o03.q1k vc_3 260 220 2472 2512 C 41 100.00 260 reject_low 4 ALIGNMENT 41 YS2-8o03.q1k vc_4 220 260 5831 5871 F 41 100.00 260 reject_low 5 ALIGNMENT 0 YS2-8o03.q1k vc_3 219 62 2513 2512 C 158 0.00 260 reject_low 4 ALIGNMENT 36 YS2-8o03.q1k vc_5 257 222 1 36 C 36 100.00 260 reject_low 8 ALIGNMENT 38 YS2-8o03.q1k vc_7 223 260 13525 13562 F 38 100.00 260 reject_low 7 ALIGNMENT 0 YS2-8o03.q1k vc_2 219 62 2146 2145 C 158 0.00 260 reject_low 3 ALIGNMENT 168 YS2-8o03.q1k chr07 219 40 795749 795927 C 180 98.89 260 accept_chi 1 ALIGNMENT 0 YS2-8o03.q1k vc_4 62 219 5831 5830 F 158 0.00 260 reject_low 5 ALIGNMENT 962 YS2-8o04.q1k chr14 32 1123 416888 417989 F 1092 96.79 1213 accept 0 ALIGNMENT 1007 YS2-8o04.p1k chr14 1221 30 420088 421266 C 1192 96.06 1337 accept 0 ALIGNMENT 0 YS2-8o05.q1k vc_5 242 62 5064 5063 C 181 0.00 281 reject_low 5 ALIGNMENT 36 YS2-8o05.q1k vc_5 278 243 1 36 C 36 100.00 281 reject_low 7 ALIGNMENT 0 YS2-8o05.q1k vc_1 241 62 2512 2511 C 180 0.00 281 reject_low 2 ALIGNMENT 0 YS2-8o05.q1k vc_7 62 243 13525 13524 F 182 0.00 281 reject_low 6 ALIGNMENT 40 YS2-8o05.q1k vc_4 242 281 5832 5871 F 40 100.00 281 reject_low 4 ALIGNMENT 195 YS2-8o05.p1k chr13 30 241 265515 265726 F 212 98.58 260 accept_chi 1 ALIGNMENT 202 YS2-8o05.q1k chr13 241 30 265515 265726 C 212 99.53 281 accept_chi 0 ALIGNMENT 0 YS2-8o05.p1k chr13 242 260 265726 265725 F 19 0.00 260 accept_chi 1 ALIGNMENT 40 YS2-8o05.q1k vc_1 281 242 2472 2511 C 40 100.00 281 reject_low 2 ALIGNMENT 0 YS2-8o05.q1k vc_5 242 62 37 36 C 181 0.00 281 reject_low 7 ALIGNMENT 38 YS2-8o05.q1k vc_7 244 281 13525 13562 F 38 100.00 281 reject_low 6 ALIGNMENT 39 YS2-8o05.q1k vc_5 281 243 5025 5063 C 39 100.00 281 reject_low 5 ALIGNMENT 40 YS2-8o05.q1k vc_3 281 242 2472 2511 C 40 100.00 281 reject_low 3 ALIGNMENT 0 YS2-8o05.q1k vc_3 241 62 2512 2511 C 180 0.00 281 reject_low 3 ALIGNMENT 0 YS2-8o05.q1k chr13 281 242 265516 265515 C 40 0.00 281 accept_chi 0 ALIGNMENT 0 YS2-8o05.q1k vc_4 62 241 5832 5831 F 180 0.00 281 reject_low 4 ALIGNMENT 0 YS2-8o06.q1k vc_3 165 40 2514 2507 C 126 0.00 207 reject_low 4 ALIGNMENT 0 YS2-8o06.q1k vc_5 168 62 37 36 C 107 0.00 207 reject_low 8 ALIGNMENT 42 YS2-8o06.q1k vc_2 207 166 2105 2146 C 42 100.00 207 reject_low 3 ALIGNMENT 0 YS2-8o06.q1k vc_4 40 165 5836 5829 F 126 0.00 207 reject_low 5 ALIGNMENT 88 YS2-8o06.q1k scplasm1 166 35 3739 3869 C 132 90.15 207 accept 1 ALIGNMENT 0 YS2-8o06.q1k vc_1 165 40 2514 2507 C 126 0.00 207 reject_low 2 ALIGNMENT 0 YS2-8o06.q1k vc_2 165 40 2147 2140 C 126 0.00 207 reject_low 3 ALIGNMENT 0 YS2-8o06.q1k scplasm1 207 167 3740 3739 C 41 0.00 207 accept 1 ALIGNMENT 88 YS2-8o06.q1k scplasm1 35 166 784 914 F 132 90.15 207 accept 0 ALIGNMENT 42 YS2-8o06.q1k vc_1 207 166 2472 2513 C 42 100.00 207 reject_low 2 ALIGNMENT 42 YS2-8o06.q1k vc_3 207 166 2472 2513 C 42 100.00 207 reject_low 4 ALIGNMENT 39 YS2-8o06.q1k vc_5 207 169 5025 5063 C 39 100.00 207 reject_low 6 ALIGNMENT 20 YS2-8o06.q1k vc_2 39 16 2141 2164 C 24 91.67 207 reject_low 3 ALIGNMENT 36 YS2-8o06.q1k vc_5 204 169 1 36 C 36 100.00 207 reject_low 8 ALIGNMENT 20 YS2-8o06.q1k vc_3 39 16 2508 2531 C 24 91.67 207 reject_low 4 ALIGNMENT 0 YS2-8o06.q1k scplasm1 167 207 914 913 F 41 0.00 207 accept 0 ALIGNMENT 0 YS2-8o06.q1k vc_5 168 62 5064 5063 C 107 0.00 207 reject_low 6 ALIGNMENT 20 YS2-8o06.q1k vc_4 16 39 5812 5835 F 24 91.67 207 reject_low 5 ALIGNMENT 20 YS2-8o06.q1k vc_1 39 16 2508 2531 C 24 91.67 207 reject_low 2 ALIGNMENT 42 YS2-8o06.q1k vc_4 166 207 5830 5871 F 42 100.00 207 reject_low 5 ALIGNMENT 0 YS2-8o06.q1k vc_7 62 169 13525 13524 F 108 0.00 207 reject_low 7 ALIGNMENT 38 YS2-8o06.q1k vc_7 170 207 13525 13562 F 38 100.00 207 reject_low 7 ALIGNMENT 946 YS2-8o07.q1k chr13 41 1129 27698 28799 F 1089 96.69 1200 accept 0 ALIGNMENT 981 YS2-8o07.p1k chr13 1126 32 28341 29445 C 1095 96.62 1239 accept 0 ALIGNMENT 982 YS2-8o08.p1k chr13 1130 29 582179 583288 C 1102 97.55 1265 accept 0 ALIGNMENT 1017 YS2-8o08.q1k chr13 40 1218 578501 579682 F 1179 96.61 1226 accept 0 ALIGNMENT 556 YS2-8o09.p1k chr04 624 30 218786 219381 C 595 98.82 642 accept_chi 1 ALIGNMENT 36 YS2-8o09.q1k vc_5 671 636 1 36 C 36 100.00 674 reject_low 8 ALIGNMENT 39 YS2-8o09.q1k vc_5 674 636 5025 5063 C 39 100.00 674 reject_low 6 ALIGNMENT 41 YS2-8o09.q1k vc_1 674 634 2472 2512 C 41 100.00 674 reject_low 2 ALIGNMENT 0 YS2-8o09.q1k chr04 635 674 219381 219380 F 40 0.00 674 accept_chi 0 ALIGNMENT 0 YS2-8o09.q1k vc_1 633 62 2513 2512 C 572 0.00 674 reject_low 2 ALIGNMENT 0 YS2-8o09.q1k vc_2 633 62 2146 2145 C 572 0.00 674 reject_low 3 ALIGNMENT 38 YS2-8o09.q1k vc_7 637 674 13525 13562 F 38 100.00 674 reject_low 7 ALIGNMENT 0 YS2-8o09.q1k vc_7 62 636 13525 13524 F 575 0.00 674 reject_low 7 ALIGNMENT 41 YS2-8o09.q1k vc_2 674 634 2105 2145 C 41 100.00 674 reject_low 3 ALIGNMENT 0 YS2-8o09.q1k vc_4 62 633 5831 5830 F 572 0.00 674 reject_low 5 ALIGNMENT 0 YS2-8o09.q1k vc_3 633 62 2513 2512 C 572 0.00 674 reject_low 4 ALIGNMENT 0 YS2-8o09.q1k vc_5 635 62 37 36 C 574 0.00 674 reject_low 8 ALIGNMENT 0 YS2-8o09.q1k vc_5 635 62 5064 5063 C 574 0.00 674 reject_low 6 ALIGNMENT 41 YS2-8o09.q1k vc_4 634 674 5831 5871 F 41 100.00 674 reject_low 5 ALIGNMENT 566 YS2-8o09.q1k chr04 39 634 218786 219381 F 596 99.33 674 accept_chi 0 ALIGNMENT 41 YS2-8o09.q1k vc_3 674 634 2472 2512 C 41 100.00 674 reject_low 4 ALIGNMENT 0 YS2-8o09.p1k chr04 642 625 218787 218786 C 18 0.00 642 accept_chi 1 ALIGNMENT 975 YS2-8o11.p1k chr16 1134 32 792527 793644 C 1103 97.10 1194 accept 0 ALIGNMENT 923 YS2-8o11.q1k chr16 42 1116 788958 790036 F 1075 95.72 1201 accept 0 ALIGNMENT 913 YS2-8o12.p1k chr09 1163 27 171447 172604 C 1137 95.07 1241 accept 0 ALIGNMENT 904 YS2-8o12.q1k chr09 30 1139 167599 168715 F 1110 95.14 1168 accept 0 ALIGNMENT 349 YS2-8o13.p1k vc_7 1 542 456 1006 F 542 88.75 792 reject_vc 5 ALIGNMENT 358 YS2-8o13.p1k vc_6 1 542 3712 4262 F 542 89.30 792 reject_vc 1 ALIGNMENT 355 YS2-8o13.p1k vc_2 542 1 1199 1749 C 542 89.11 792 reject_vc 3 ALIGNMENT 355 YS2-8o13.p1k vc_3 542 1 1199 1749 C 542 89.11 792 reject_vc 4 ALIGNMENT 355 YS2-8o13.p1k vc_1 542 1 1199 1749 C 542 89.11 792 reject_vc 2 ALIGNMENT 358 YS2-8o13.p1k vc_5 542 1 4119 4669 C 542 89.30 792 reject_vc 0 ALIGNMENT 349 YS2-8o13.p1k vc_7 1 542 13918 14468 F 542 88.75 792 reject_vc 6 ALIGNMENT 40 YS2-8o14.q1k vc_2 220 181 2105 2144 C 40 100.00 220 reject_low 3 ALIGNMENT 139 YS2-8o14.q1k chr09 40 180 369706 369846 F 141 100.00 220 accept 0 ALIGNMENT 37 YS2-8o14.q1k vc_5 217 173 1 44 C 45 95.56 220 reject_low 7 ALIGNMENT 0 YS2-8o14.q1k vc_4 62 180 5832 5831 F 119 0.00 220 reject_low 5 ALIGNMENT 21 YS2-8o14.q1k vc_5 45 22 2375 2398 C 24 95.83 220 reject_low 7 ALIGNMENT 0 YS2-8o14.q1k vc_3 180 62 2512 2511 C 119 0.00 220 reject_low 4 ALIGNMENT 40 YS2-8o14.q1k vc_1 220 181 2472 2511 C 40 100.00 220 reject_low 2 ALIGNMENT 38 YS2-8o14.q1k vc_7 183 220 13525 13562 F 38 100.00 220 reject_low 6 ALIGNMENT 40 YS2-8o14.q1k vc_4 181 220 5832 5871 F 40 100.00 220 reject_low 5 ALIGNMENT 40 YS2-8o14.q1k vc_3 220 181 2472 2511 C 40 100.00 220 reject_low 4 ALIGNMENT 0 YS2-8o14.q1k vc_5 172 62 5072 5071 C 111 0.00 220 reject_low 1 ALIGNMENT 0 YS2-8o14.q1k chr09 181 220 369846 369845 F 40 0.00 220 accept 0 ALIGNMENT 40 YS2-8o14.q1k vc_5 220 173 5025 5071 C 48 95.83 220 reject_low 1 ALIGNMENT 0 YS2-8o14.q1k vc_2 180 62 2145 2144 C 119 0.00 220 reject_low 3 ALIGNMENT 0 YS2-8o14.q1k vc_1 180 62 2512 2511 C 119 0.00 220 reject_low 2 ALIGNMENT 0 YS2-8o14.q1k vc_7 62 182 13525 13524 F 121 0.00 220 reject_low 6 ALIGNMENT 0 YS2-8o14.q1k vc_5 172 46 45 2374 C 127 0.00 220 reject_low 7 ALIGNMENT 201 YS2-8o15.p1k chr07 263 29 440007 440243 C 235 98.30 282 accept_chi 1 ALIGNMENT 0 YS2-8o15.q1k vc_5 275 62 37 36 C 214 0.00 314 reject_low 7 ALIGNMENT 0 YS2-8o15.q1k vc_7 62 276 13525 13524 F 215 0.00 314 reject_low 6 ALIGNMENT 0 YS2-8o15.p1k chr07 282 264 440008 440007 C 19 0.00 282 accept_chi 1 ALIGNMENT 39 YS2-8o15.q1k vc_5 314 276 5025 5063 C 39 100.00 314 reject_low 5 ALIGNMENT 40 YS2-8o15.q1k vc_3 314 275 2472 2511 C 40 100.00 314 reject_low 3 ALIGNMENT 36 YS2-8o15.q1k vc_5 311 276 1 36 C 36 100.00 314 reject_low 7 ALIGNMENT 0 YS2-8o15.q1k vc_3 274 62 2512 2511 C 213 0.00 314 reject_low 3 ALIGNMENT 218 YS2-8o15.q1k chr07 38 274 440007 440243 F 237 100.00 314 accept_chi 0 ALIGNMENT 0 YS2-8o15.q1k chr07 275 314 440243 440242 F 40 0.00 314 accept_chi 0 ALIGNMENT 0 YS2-8o15.q1k vc_1 274 62 2512 2511 C 213 0.00 314 reject_low 2 ALIGNMENT 0 YS2-8o15.q1k vc_4 62 274 5832 5831 F 213 0.00 314 reject_low 4 ALIGNMENT 40 YS2-8o15.q1k vc_1 314 275 2472 2511 C 40 100.00 314 reject_low 2 ALIGNMENT 0 YS2-8o15.q1k vc_5 275 62 5064 5063 C 214 0.00 314 reject_low 5 ALIGNMENT 40 YS2-8o15.q1k vc_4 275 314 5832 5871 F 40 100.00 314 reject_low 4 ALIGNMENT 38 YS2-8o15.q1k vc_7 277 314 13525 13562 F 38 100.00 314 reject_low 6 ALIGNMENT 1008 YS2-8o16.p1k chr04 1198 29 960947 962125 C 1170 96.07 1279 accept 0 ALIGNMENT 893 YS2-8o16.q1k chr04 45 1099 957759 958829 F 1055 96.02 1158 accept 0 ALIGNMENT 991 YS2-8o17.p1k chr14 30 1206 712150 713340 F 1177 95.07 1221 accept 0 ALIGNMENT 1007 YS2-8o18.p1k chr16 1173 33 202609 203756 C 1141 96.58 1286 accept 0 ALIGNMENT 888 YS2-8o18.q1k chr16 29 1044 199490 200516 F 1016 96.65 1174 accept 0 ALIGNMENT 0 YS2-8o20.q1k vc_5 756 62 5064 5063 C 695 0.00 1223 reject_low 21 ALIGNMENT 0 YS2-8o20.p1k vc_1 768 62 2473 2472 C 707 0.00 1265 reject_low 25 ALIGNMENT 0 YS2-8o20.q1k vc_5 756 62 37 36 C 695 0.00 1223 reject_low 24 ALIGNMENT 0 YS2-8o20.q1k vc_4 794 62 5813 5812 C 733 0.00 1223 reject_low 12 ALIGNMENT 0 YS2-8o20.p1k vc_2 768 62 2106 2105 C 707 0.00 1265 reject_low 5 ALIGNMENT 0 YS2-8o20.p1k vc_6 62 996 3585 3584 F 935 0.00 1265 reject_low 13 ALIGNMENT 297 YS2-8o20.p1k vc_4 769 1122 5871 6225 F 354 94.35 1265 reject_low 8 ALIGNMENT 0 YS2-8o20.q1k vc_5 62 794 2398 2397 F 733 0.00 1223 reject_low 2 ALIGNMENT 0 YS2-8o20.p1k vc_5 768 62 5026 5025 C 707 0.00 1265 reject_low 2 ALIGNMENT 0 YS2-8o20.q1k vc_3 753 62 2514 2513 C 692 0.00 1223 reject_low 20 ALIGNMENT 248 YS2-8o20.q1k vc_4 1151 795 5447 5812 C 357 91.04 1223 reject_low 12 ALIGNMENT 69 YS2-8o20.q1k vc_7 1151 1004 5019 5172 C 148 83.78 1223|0,1 reject_low 17 ALIGNMENT 0 YS2-8o20.q1k vc_3 62 794 2531 2530 F 733 0.00 1223 reject_low 11 ALIGNMENT 0 YS2-8o20.p1k vc_7 62 768 13562 13561 F 707 0.00 1265 reject_low 7 ALIGNMENT 36 YS2-8o20.q1k vc_5 792 757 1 36 C 36 100.00 1223 reject_low 24 ALIGNMENT 0 YS2-8o20.q1k vc_2 910 796 2106 2105 C 115 0.00 1223 reject_low 19 ALIGNMENT 0 YS2-8o20.q1k vc_3 910 796 2473 2472 C 115 0.00 1223 reject_low 20 ALIGNMENT 0 YS2-8o20.p1k vc_7 62 768 100 99 F 707 0.00 1265 reject_low 3 ALIGNMENT 42 YS2-8o20.q1k vc_3 795 754 2472 2513 C 42 100.00 1223 reject_low 20 ALIGNMENT 87 YS2-8o20.q1k vc_4 883 795 1446 1534 C 89 100.00 1223 reject_low 16 ALIGNMENT 0 YS2-8o20.q1k vc_2 753 62 2147 2146 C 692 0.00 1223 reject_low 19 ALIGNMENT 0 YS2-8o20.p1k vc_3 938 800 2442 2441 C 139 0.00 1265 reject_low 26 ALIGNMENT 0 YS2-8o20.p1k vc_1 938 800 2442 2441 C 139 0.00 1265 reject_low 25 ALIGNMENT 39 YS2-8o20.q1k vc_5 795 757 5025 5063 C 39 100.00 1223 reject_low 21 ALIGNMENT 0 YS2-8o20.p1k chr14 938 753 454248 454247 C 186 0.00 1265 accept_chi 1 ALIGNMENT 109 YS2-8o20.p1k vc_6 997 1201 3585 3790 F 205 85.85 1265 reject_low 13 ALIGNMENT 0 YS2-8o20.q1k vc_1 910 796 2473 2472 C 115 0.00 1223 reject_low 18 ALIGNMENT 644 YS2-8o20.q1k chr14 40 754 454247 454961 F 715 100.00 1223 accept_chi 0 ALIGNMENT 0 YS2-8o20.p1k vc_4 62 768 5871 5870 F 707 0.00 1265 reject_low 8 ALIGNMENT 42 YS2-8o20.q1k vc_1 795 754 2472 2513 C 42 100.00 1223 reject_low 18 ALIGNMENT 330 YS2-8o20.p1k vc_7 769 1201 100 534 F 433 92.15 1265 reject_low 3 ALIGNMENT 0 YS2-8o20.q1k vc_5 910 796 5026 5025 C 115 0.00 1223 reject_low 21 ALIGNMENT 0 YS2-8o20.q1k chr14 755 910 454961 454960 F 156 0.00 1223 accept_chi 0 ALIGNMENT 0 YS2-8o20.q1k vc_7 794 62 2728 2727 C 733 0.00 1223 reject_low 3 ALIGNMENT 642 YS2-8o20.p1k chr14 752 39 454247 454960 C 714 100.00 1265 accept_chi 1 ALIGNMENT 0 YS2-8o20.p1k vc_1 768 62 2106 2105 C 707 0.00 1265 reject_low 4 ALIGNMENT 26 YS2-8o20.p1k vc_1 799 769 2441 2472 C 31 96.77 1265 reject_low 25 ALIGNMENT 330 YS2-8o20.p1k vc_5 1201 769 4591 5025 C 433 92.15 1265 reject_low 2 ALIGNMENT 0 YS2-8o20.q1k vc_4 62 753 5830 5829 F 692 0.00 1223 reject_low 15 ALIGNMENT 255 YS2-8o20.q1k vc_5 795 1151 2398 2761 F 357 91.60 1223 reject_low 2 ALIGNMENT 0 YS2-8o20.q1k vc_7 955 62 6412 6411 C 894 0.00 1223 reject_low 17 ALIGNMENT 330 YS2-8o20.p1k vc_3 1201 769 1671 2105 C 433 92.15 1265 reject_low 6 ALIGNMENT 255 YS2-8o20.q1k vc_3 795 1151 2531 2894 F 357 91.60 1223 reject_low 11 ALIGNMENT 42 YS2-8o20.q1k vc_2 795 754 2105 2146 C 42 100.00 1223 reject_low 19 ALIGNMENT 0 YS2-8o20.q1k vc_1 753 62 2514 2513 C 692 0.00 1223 reject_low 18 ALIGNMENT 255 YS2-8o20.q1k vc_7 1151 795 2364 2727 C 357 91.60 1223 reject_low 3 ALIGNMENT 0 YS2-8o20.q1k vc_4 794 62 1535 1534 C 733 0.00 1223 reject_low 16 ALIGNMENT 255 YS2-8o20.q1k vc_1 795 1151 2531 2894 F 357 91.60 1223 reject_low 9 ALIGNMENT 42 YS2-8o20.q1k vc_4 754 795 5830 5871 F 42 100.00 1223 reject_low 15 ALIGNMENT 0 YS2-8o20.q1k vc_7 62 757 63 62 F 696 0.00 1223 reject_low 22 ALIGNMENT 0 YS2-8o20.q1k vc_4 62 794 126 125 F 733 0.00 1223 reject_low 14 ALIGNMENT 0 YS2-8o20.q1k vc_1 62 794 2531 2530 F 733 0.00 1223 reject_low 9 ALIGNMENT 255 YS2-8o20.q1k vc_2 795 1151 2164 2527 F 357 91.60 1223 reject_low 10 ALIGNMENT 0 YS2-8o20.q1k vc_4 910 884 1447 1446 C 27 0.00 1223 reject_low 16 ALIGNMENT 41 YS2-8o20.q1k vc_7 1005 956 6360 6411 C 50 96.00 1223|1,0 reject_low 17 ALIGNMENT 38 YS2-8o20.q1k vc_7 758 795 13525 13562 F 38 100.00 1223 reject_low 23 ALIGNMENT 0 YS2-8o20.p1k vc_3 768 62 2473 2472 C 707 0.00 1265 reject_low 26 ALIGNMENT 38 YS2-8o20.q1k vc_7 758 795 63 100 F 38 100.00 1223 reject_low 22 ALIGNMENT 0 YS2-8o20.q1k vc_7 796 910 100 99 F 115 0.00 1223 reject_low 22 ALIGNMENT 330 YS2-8o20.p1k vc_2 1201 769 1671 2105 C 433 92.15 1265 reject_low 5 ALIGNMENT 0 YS2-8o20.q1k vc_7 1004 1005 5172 6360 C 0 0.00 1223 reject_low 17 ALIGNMENT 0 YS2-8o20.q1k vc_5 910 793 2 1 C 118 0.00 1223 reject_low 24 ALIGNMENT 148 YS2-8o20.q1k vc_4 795 956 126 287 F 162 97.53 1223 reject_low 14 ALIGNMENT 0 YS2-8o20.q1k vc_4 796 795 5872 6353 F 0 0.00 1223 reject_low 15 ALIGNMENT 0 YS2-8o20.p1k vc_3 768 62 2106 2105 C 707 0.00 1265 reject_low 6 ALIGNMENT 0 YS2-8o20.q1k vc_7 796 910 13562 13561 F 115 0.00 1223 reject_low 23 ALIGNMENT 330 YS2-8o20.p1k vc_1 1201 769 1671 2105 C 433 92.15 1265 reject_low 4 ALIGNMENT 330 YS2-8o20.p1k vc_7 769 1201 13562 13996 F 433 92.15 1265 reject_low 7 ALIGNMENT 26 YS2-8o20.p1k vc_3 799 769 2441 2472 C 31 96.77 1265 reject_low 26 ALIGNMENT 0 YS2-8o20.q1k vc_2 62 794 2164 2163 F 733 0.00 1223 reject_low 10 ALIGNMENT 148 YS2-8o20.q1k vc_4 795 956 6353 6514 F 162 97.53 1223|1,0 reject_low 15 ALIGNMENT 0 YS2-8o20.q1k vc_7 62 757 13525 13524 F 696 0.00 1223 reject_low 23 ALIGNMENT 388 YS2-8o21.p1k chr07 726 179 286303 286836 C 548 93.98 1130 accept 0 ALIGNMENT 926 YS2-8o21.q1k chr07 31 1087 282630 283682 F 1057 96.88 1176 accept 0 ALIGNMENT 837 YS2-8o24.q1k chr15 31 1121 53595 54670 F 1091 94.13 1132 accept 0 ALIGNMENT 779 YS2-8o24.p1k chr15 1037 29 57324 58331 C 1009 93.56 1229 accept 0 ALIGNMENT 273 YS2-8p01.q1k chr12 35 481 892128 892568 F 447 88.14 1240 accept 0 ALIGNMENT 941 YS2-8p01.p1k chr12 1095 30 896178 897248 C 1066 96.34 1227 accept 0 ALIGNMENT 0 YS2-8p03.q1k chr09 62 841 210660 210659 F 780 0.00 1230 reject_low 4 ALIGNMENT 0 YS2-8p03.q1k chr05 842 62 443273 443272 C 781 0.00 1230 reject_low 6 ALIGNMENT 74 YS2-8p03.q1k chr14 925 843 569860 569942 C 83 96.39 1230 reject_low 7 ALIGNMENT 74 YS2-8p03.q1k chr14 843 925 602312 602394 F 83 96.39 1230 reject_low 8 ALIGNMENT 864 YS2-8p03.p1k chr09 29 1078 182484 183548 F 1050 96.00 1118 accept 0 ALIGNMENT 75 YS2-8p03.q1k chr05 925 843 443191 443272 C 83 97.59 1230 reject_low 6 ALIGNMENT 1026 YS2-8p03.q1k chr09 1180 40 183162 184315 C 1141 98.07 1230 accept 0 ALIGNMENT 0 YS2-8p03.q1k chr14 842 62 569943 569942 C 781 0.00 1230 reject_low 7 ALIGNMENT 72 YS2-8p03.q1k chr07 844 915 739127 739198 F 72 100.00 1230 reject_low 12 ALIGNMENT 72 YS2-8p03.q1k chr02 844 915 197497 197568 F 72 100.00 1230 reject_low 11 ALIGNMENT 0 YS2-8p03.q1k chr05 833 62 551364 551363 C 772 0.00 1230 reject_low 3 ALIGNMENT 73 YS2-8p03.q1k chr16 915 843 880294 880366 C 73 100.00 1230 reject_low 10 ALIGNMENT 0 YS2-8p03.q1k chr12 62 829 734791 734790 F 768 0.00 1230 reject_low 1 ALIGNMENT 0 YS2-8p03.q1k chr12 838 62 1052147 1052146 C 777 0.00 1230 reject_low 2 ALIGNMENT 0 YS2-8p03.q1k chr14 62 842 602312 602311 F 781 0.00 1230 reject_low 8 ALIGNMENT 79 YS2-8p03.q1k chr12 830 926 734791 734887 F 97 94.85 1230 reject_low 1 ALIGNMENT 0 YS2-8p03.q1k chr16 62 842 819524 819523 F 781 0.00 1230 reject_low 5 ALIGNMENT 73 YS2-8p03.q1k chr04 915 843 668004 668076 C 73 100.00 1230 reject_low 9 ALIGNMENT 76 YS2-8p03.q1k chr09 842 925 210660 210742 F 84 97.62 1230 reject_low 4 ALIGNMENT 0 YS2-8p03.q1k chr07 62 843 739127 739126 F 782 0.00 1230 reject_low 12 ALIGNMENT 79 YS2-8p03.q1k chr12 932 839 1052053 1052146 C 94 94.68 1230 reject_low 2 ALIGNMENT 0 YS2-8p03.q1k chr02 62 843 197497 197496 F 782 0.00 1230 reject_low 11 ALIGNMENT 73 YS2-8p03.q1k chr05 915 834 551282 551363 C 82 96.34 1230 reject_low 3 ALIGNMENT 0 YS2-8p03.q1k chr04 842 62 668077 668076 C 781 0.00 1230 reject_low 9 ALIGNMENT 76 YS2-8p03.q1k chr16 843 925 819524 819607 F 83 97.59 1230 reject_low 5 ALIGNMENT 0 YS2-8p03.q1k chr16 842 62 880367 880366 C 781 0.00 1230 reject_low 10 ALIGNMENT 911 YS2-8p04.p1k chr08 38 1136 152529 153643 F 1099 94.81 1266 accept 0 ALIGNMENT 934 YS2-8p04.q1k chr08 1206 39 156363 157537 C 1168 94.95 1206 accept 0 ALIGNMENT 903 YS2-8p05.q1k chr10 1164 30 630306 631436 C 1135 94.63 1230 accept 0 ALIGNMENT 934 YS2-8p05.p1k chr10 33 1174 626377 627530 F 1142 94.57 1300 accept 0 ALIGNMENT 325 YS2-8p06.q1k chr04 167 883 949351 950058 F 717 83.26 1323 accept_chi 0 ALIGNMENT 0 YS2-8p06.p1k chr08 291 308 147472 147471 F 18 0.00 308 accept_chi 1 ALIGNMENT 252 YS2-8p06.p1k chr08 30 290 147212 147472 F 261 100.00 308 accept_chi 1 ALIGNMENT 939 YS2-8p08.p1k chr01 1100 36 119016 120089 C 1065 97.00 1255 accept 0 ALIGNMENT 805 YS2-8p09.p1k chr03 32 998 256416 257380 F 967 96.07 1286 accept 0 ALIGNMENT 926 YS2-8p09.q1k chr03 1127 32 256957 258051 C 1096 96.44 1210 accept 0 ALIGNMENT 0 YS2-8p10.q1k chr04 433 472 259299 259298 F 40 0.00 472 accept_chi 1 ALIGNMENT 0 YS2-8p10.q1k vc_5 433 62 5064 5063 C 372 0.00 472 reject_low 5 ALIGNMENT 40 YS2-8p10.q1k vc_3 472 433 2472 2511 C 40 100.00 472 reject_low 3 ALIGNMENT 0 YS2-8p10.p1k chr04 452 434 258897 258896 C 19 0.00 452 accept_chi 0 ALIGNMENT 387 YS2-8p10.p1k chr04 433 35 258896 259294 C 399 99.50 452 accept_chi 0 ALIGNMENT 387 YS2-8p10.q1k chr04 30 432 258896 259299 F 403 99.26 472 accept_chi 1 ALIGNMENT 0 YS2-8p10.q1k vc_7 62 434 13525 13524 F 373 0.00 472 reject_low 6 ALIGNMENT 40 YS2-8p10.q1k vc_4 433 472 5832 5871 F 40 100.00 472 reject_low 4 ALIGNMENT 40 YS2-8p10.q1k vc_1 472 433 2472 2511 C 40 100.00 472 reject_low 2 ALIGNMENT 0 YS2-8p10.q1k vc_3 432 62 2512 2511 C 371 0.00 472 reject_low 3 ALIGNMENT 0 YS2-8p10.q1k vc_5 433 62 37 36 C 372 0.00 472 reject_low 7 ALIGNMENT 0 YS2-8p10.q1k vc_4 62 432 5832 5831 F 371 0.00 472 reject_low 4 ALIGNMENT 36 YS2-8p10.q1k vc_5 469 434 1 36 C 36 100.00 472 reject_low 7 ALIGNMENT 39 YS2-8p10.q1k vc_5 472 434 5025 5063 C 39 100.00 472 reject_low 5 ALIGNMENT 38 YS2-8p10.q1k vc_7 435 472 13525 13562 F 38 100.00 472 reject_low 6 ALIGNMENT 0 YS2-8p10.q1k vc_1 432 62 2512 2511 C 371 0.00 472 reject_low 2 ALIGNMENT 136 YS2-8p11.p1k chr01 1175 663 176978 177492 C 513 75.44 1270 reject_low 1 ALIGNMENT 947 YS2-8p11.q1k chr06 37 1181 95894 97014 F 1145 95.63 1206 accept 0 ALIGNMENT 0 YS2-8p11.p1k chr01 662 62 177493 177492 C 601 0.00 1270 reject_low 1 ALIGNMENT 977 YS2-8p11.p1k chr06 1177 33 99548 100692 C 1145 95.46 1270 accept 0 ALIGNMENT 977 YS2-8p12.q1k chr07 28 1153 787027 788163 F 1126 96.71 1154 accept 0 ALIGNMENT 361 YS2-8p12.q1k chr07 315 786 437469 437940 F 472 92.80 1154 reject_low 1 ALIGNMENT 1004 YS2-8p12.p1k chr07 1218 31 789567 790766 C 1188 96.63 1250 accept 0 ALIGNMENT 0 YS2-8p12.q1k chr07 62 314 437469 437468 F 253 0.00 1154 reject_low 1 ALIGNMENT 0 YS2-8p12.q1k chr07 787 876 437940 437939 F 90 0.00 1154 reject_low 1 ALIGNMENT 0 YS2-8p13.q1k vc_5 315 62 37 36 C 254 0.00 354 reject_low 7 ALIGNMENT 0 YS2-8p13.q1k vc_3 313 62 2513 2512 C 252 0.00 354 reject_low 3 ALIGNMENT 36 YS2-8p13.q1k vc_5 351 316 1 36 C 36 100.00 354 reject_low 7 ALIGNMENT 0 YS2-8p13.q1k chr11 315 354 527321 527320 F 40 0.00 354 accept_chi 1 ALIGNMENT 252 YS2-8p13.q1k chr11 38 314 527044 527321 F 277 97.11 354 accept_chi 1 ALIGNMENT 38 YS2-8p13.q1k vc_7 317 354 13525 13562 F 38 100.00 354 reject_low 6 ALIGNMENT 41 YS2-8p13.q1k vc_1 354 314 2472 2512 C 41 100.00 354 reject_low 2 ALIGNMENT 0 YS2-8p13.q1k vc_1 313 62 2513 2512 C 252 0.00 354 reject_low 2 ALIGNMENT 41 YS2-8p13.q1k vc_3 354 314 2472 2512 C 41 100.00 354 reject_low 3 ALIGNMENT 257 YS2-8p13.p1k chr11 309 32 527044 527321 C 278 97.48 327 accept_chi 0 ALIGNMENT 41 YS2-8p13.q1k vc_4 314 354 5831 5871 F 41 100.00 354 reject_low 4 ALIGNMENT 39 YS2-8p13.q1k vc_5 354 316 5025 5063 C 39 100.00 354 reject_low 5 ALIGNMENT 0 YS2-8p13.q1k vc_7 62 316 13525 13524 F 255 0.00 354 reject_low 6 ALIGNMENT 0 YS2-8p13.q1k vc_5 315 62 5064 5063 C 254 0.00 354 reject_low 5 ALIGNMENT 0 YS2-8p13.p1k chr11 327 310 527045 527044 C 18 0.00 327 accept_chi 0 ALIGNMENT 0 YS2-8p13.q1k vc_4 62 313 5831 5830 F 252 0.00 354 reject_low 4 ALIGNMENT 1048 YS2-8p15.p1k chr10 33 1254 380282 381503 F 1222 95.74 1287 accept 0 ALIGNMENT 1019 YS2-8p15.q1k chr10 1152 31 383698 384816 C 1122 97.86 1152 accept 0 ALIGNMENT 344 YS2-8p16.q1k chr02 562 32 30313 30839 C 531 89.64 1207 ambiguous_trans 8 ALIGNMENT 328 YS2-8p16.q1k chr04 32 562 518445 518971 F 531 88.70 1207 ambiguous_trans 13 ALIGNMENT 361 YS2-8p16.q1k chr12 32 562 980498 981024 F 531 90.77 1207 ambiguous_trans 4 ALIGNMENT 341 YS2-8p16.q1k chr03 562 32 85482 86008 C 531 89.45 1207 ambiguous_trans 9 ALIGNMENT 338 YS2-8p16.q1k chr07 562 32 812124 812650 C 531 89.27 1207 ambiguous_trans 11 ALIGNMENT 328 YS2-8p16.q1k chr07 32 562 573506 574032 F 531 88.70 1207 ambiguous_trans 14 ALIGNMENT 329 YS2-8p16.q1k chr12 562 32 941861 942387 C 531 88.70 1207 ambiguous_trans 12 ALIGNMENT 350 YS2-8p16.q1k chr04 562 32 981837 982363 C 531 90.02 1207 ambiguous_trans 7 ALIGNMENT 361 YS2-8p16.q1k chr15 32 562 708825 709351 F 531 90.77 1207 ambiguous_trans 5 ALIGNMENT 338 YS2-8p16.q1k chr06 562 32 138580 139106 C 531 89.27 1207 ambiguous_trans 10 ALIGNMENT 356 YS2-8p16.q1k chr15 562 32 970954 971480 C 531 90.40 1207 ambiguous_trans 6 ALIGNMENT 932 YS2-8p16.p1k chr08 1149 31 86995 88128 C 1119 96.16 1245 ambiguous_trans 2 ALIGNMENT 962 YS2-8p16.p1k chr10 1149 31 198927 200060 C 1119 97.05 1245 ambiguous_trans 0 ALIGNMENT 365 YS2-8p16.q1k chr04 562 32 872488 873014 C 531 90.96 1207 ambiguous_trans 3 ALIGNMENT 324 YS2-8p16.q1k chr14 32 477 566794 567236 F 446 92.60 1207 ambiguous_trans 15 ALIGNMENT 933 YS2-8p16.p1k chr16 31 1149 440517 441649 F 1119 96.16 1245 ambiguous_trans 1 ALIGNMENT 950 YS2-8p18.q1k chr15 1204 34 748118 749299 C 1171 94.71 1204 accept 0 ALIGNMENT 1004 YS2-8p18.p1k chr15 38 1284 744848 746096 F 1247 94.55 1285 accept 0 ALIGNMENT 0 YS2-8p19.q1k chr11 249 658 68 67 F 410 0.00 1280 reject_low 25 ALIGNMENT 0 YS2-8p19.p1k chr05 435 378 4590 4587 C 58 0.00 1268 reject_low 14 ALIGNMENT 24 YS2-8p19.p1k chr05 705 676 4293 4322 C 30 93.33 1268 reject_low 14 ALIGNMENT 22 YS2-8p19.p1k chr07 676 700 1086729 1086753 F 25 96.00 1268 reject_low 9 ALIGNMENT 22 YS2-8p19.p1k chr10 700 676 4586 4610 C 25 96.00 1268 ambiguous_tel 3 reject_low 31 ALIGNMENT 257 YS2-8p19.p1k chr12 777 1255 1067982 1068449 F 479 86.64 1268|2,0 reject_low 5 ALIGNMENT 24 YS2-8p19.p1k chr12 676 705 1067361 1067390 F 30 93.33 1268 reject_low 5 ALIGNMENT 28 YS2-8p19.q1k chr14 283 41 784050 784289 C 243 87.24 1280 reject_low 21 ALIGNMENT 20 YS2-8p19.q1k chr12 37 185 11217 11357 F 149 88.59 1280 reject_low 24 ALIGNMENT 0 YS2-8p19.p1k chr15 701 701 1087013 1087037 F 1 0.00 1268 reject_low 6 ALIGNMENT 20 YS2-8p19.q1k chr06 251 209 270103 270145 C 43 97.67 1280 reject_low 27 ALIGNMENT 22 YS2-8p19.q1k chr10 303 359 3 60 F 57 94.74 1280 reject_low 31 ALIGNMENT 424 YS2-8p19.p1k chr12 1255 603 3368 4009 C 653 89.89 1268 reject_low 12 ALIGNMENT 52 YS2-8p19.p1k chr10 777 725 4454 4506 C 53 100.00 1268|0,5 ambiguous_tel 3 reject_low 31 ALIGNMENT 22 YS2-8p19.p1k chr09 700 676 4603 4627 C 25 96.00 1268 ambiguous_tel 1 reject_low 30 ALIGNMENT 260 YS2-8p19.p1k chr16 1255 777 3060 3527 C 479 86.85 1268|0,2 reject_low 8 ALIGNMENT 0 YS2-8p19.q1k chr10 62 379 5 4 F 318 0.00 1280 ambiguous_tel 3 ALIGNMENT 29 YS2-8p19.p1k chr05 470 436 4555 4589 C 35 94.29 1268 reject_low 14 ALIGNMENT 0 YS2-8p19.p1k chr10 795 778 4455 4454 C 18 0.00 1268 reject_low 31 ALIGNMENT 578 YS2-8p19.p1k chr07 33 659 1086039 1086666 F 627 97.77 1268 reject_low 9 ALIGNMENT 30 YS2-8p19.q1k chr03 250 158 316519 316614 C 93 92.47 1280 reject_low 19 ALIGNMENT 0 YS2-8p19.q1k chr09 62 289 8 7 F 228 0.00 1280 reject_low 30 ALIGNMENT 0 YS2-8p19.q1k chr06 658 252 270104 270103 C 407 0.00 1280 reject_low 27 ALIGNMENT 0 YS2-8p19.q1k chr08 232 62 556986 556985 C 171 0.00 1280 reject_low 26 ALIGNMENT 0 YS2-8p19.p1k chr05 701 701 572677 572701 F 1 0.00 1268 reject_low 7 ALIGNMENT 0 YS2-8p19.p1k chr07 701 701 1086754 1086778 F 1 0.00 1268 reject_low 9 ALIGNMENT 260 YS2-8p19.p1k chr05 777 1255 573273 573740 F 479 86.85 1268|2,0 reject_low 7 ALIGNMENT 424 YS2-8p19.p1k chr12 1255 603 8903 9544 C 653 89.89 1268 reject_low 13 ALIGNMENT 405 YS2-8p19.q1k chr09 363 1065 5 699 F 703 88.19 1280 ambiguous_tel 1 ALIGNMENT 257 YS2-8p19.p1k chr12 777 1255 1074645 1075112 F 479 86.64 1268|2,0 ambiguous_tel 0 ALIGNMENT 0 YS2-8p19.q1k chr06 658 128 270104 270103 C 531 0.00 1280 reject_low 29 ALIGNMENT 53 YS2-8p19.p1k chr12 725 780 1074128 1074183 F 56 98.21 1268|5,2 ambiguous_tel 0 ALIGNMENT 0 YS2-8p19.p1k chr04 701 701 1527848 1527872 F 1 0.00 1268 ambiguous_tel 2 ALIGNMENT 0 YS2-8p19.q1k chr04 630 62 1531909 1531908 C 569 0.00 1280 ambiguous_tel 2 ALIGNMENT 239 YS2-8p19.p1k chr10 1138 777 3628 3989 C 362 89.50 1268|0,1 ambiguous_tel 3 ALIGNMENT 0 YS2-8p19.q1k chr10 62 302 3 2 F 241 0.00 1280 reject_low 31 ALIGNMENT 0 YS2-8p19.p1k chr05 675 660 4323 4384 C 16 0.00 1268 reject_low 14 ALIGNMENT 0 YS2-8p19.p1k chr09 701 701 4578 4602 C 1 0.00 1268 ambiguous_tel 1 reject_low 30 ALIGNMENT 0 YS2-8p19.q1k chr14 62 477 2 1 F 416 0.00 1280 reject_low 4 ALIGNMENT 22 YS2-8p19.p1k chr15 676 700 1086988 1087012 F 25 96.00 1268 reject_low 6 ALIGNMENT 22 YS2-8p19.p1k chr14 700 676 4215 4239 C 25 96.00 1268 reject_low 4 ALIGNMENT 22 YS2-8p19.p1k chr04 676 700 1527823 1527847 F 25 96.00 1268 ambiguous_tel 2 ALIGNMENT 0 YS2-8p19.p1k chr12 730 729 1074102 1074132 F 0 0.00 1268 ambiguous_tel 0 ALIGNMENT 0 YS2-8p19.p1k chr09 675 660 4628 4689 C 16 0.00 1268 ambiguous_tel 1 ALIGNMENT 0 YS2-8p19.q1k chr12 62 372 5664 5663 F 311 0.00 1280 reject_low 13 ALIGNMENT 424 YS2-8p19.p1k chr08 1255 603 3100 3741 C 653 89.89 1268 reject_low 16 ALIGNMENT 0 YS2-8p19.q1k chr08 238 62 562644 562643 C 177 0.00 1280 reject_low 10 ALIGNMENT 0 YS2-8p19.q1k chr13 62 394 6 5 F 333 0.00 1280 reject_low 11 ALIGNMENT 295 YS2-8p19.q1k chr12 368 944 3 588 F 577 86.48 1280 reject_low 12 ALIGNMENT 0 YS2-8p19.q1k chr12 62 367 3 2 F 306 0.00 1280 reject_low 12 ALIGNMENT 32 YS2-8p19.q1k chr09 290 359 8 77 F 70 95.71 1280 reject_low 30 ALIGNMENT 27 YS2-8p19.q1k chr13 162 36 924304 924429 C 127 90.55 1280 reject_low 20 ALIGNMENT 283 YS2-8p19.q1k chr12 373 1065 5664 6339 F 693 83.55 1280 reject_low 13 ALIGNMENT 291 YS2-8p19.q1k chr12 1086 434 1070995 1071646 C 653 83.92 1280 reject_low 5 ALIGNMENT 29 YS2-8p19.p1k chr12 436 470 1067094 1067128 F 35 94.29 1268 reject_low 5 ALIGNMENT 0 YS2-8p19.p1k chr12 706 724 1067391 1067464 F 19 0.00 1268 reject_low 5 ALIGNMENT 584 YS2-8p19.p1k chr04 33 659 1527133 1527760 F 627 98.09 1268 ambiguous_tel 2 ALIGNMENT 278 YS2-8p19.q1k chr14 478 1065 2 587 F 588 84.52 1280 reject_low 4 ALIGNMENT 0 YS2-8p19.q1k chr06 208 62 270146 270145 C 147 0.00 1280 reject_low 27 ALIGNMENT 22 YS2-8p19.q1k chr12 327 438 11206 11316 F 112 90.18 1280 reject_low 28 ALIGNMENT 0 YS2-8p19.p1k chr04 730 729 1527901 1527931 F 0 0.00 1268 ambiguous_tel 2 ALIGNMENT 186 YS2-8p19.q1k chr04 1086 631 1531457 1531908 C 456 82.89 1280 ambiguous_tel 2 ALIGNMENT 157 YS2-8p19.p1k chr05 659 488 4385 4556 C 172 97.67 1268 reject_low 14 ALIGNMENT 24 YS2-8p19.q1k chr14 367 72 784040 784331 C 296 86.15 1280 reject_low 23 ALIGNMENT 0 YS2-8p19.p1k chr10 701 701 4561 4585 C 1 0.00 1268 ambiguous_tel 3 reject_low 31 ALIGNMENT 53 YS2-8p19.p1k chr14 780 725 4080 4135 C 56 98.21 1268|2,5 reject_low 4 ALIGNMENT 22 YS2-8p19.p1k chr16 700 676 4124 4148 C 25 96.00 1268 reject_low 8 ALIGNMENT 0 YS2-8p19.p1k chr10 675 660 4611 4672 C 16 0.00 1268 ambiguous_tel 3 ALIGNMENT 20 YS2-8p19.q1k chr06 127 85 270103 270145 C 43 100.00 1280 reject_low 29 ALIGNMENT 0 YS2-8p19.p1k chr12 779 778 1074182 1074646 F 0 0.00 1268 ambiguous_tel 0 ALIGNMENT 53 YS2-8p19.p1k chr05 725 780 572756 572811 F 56 98.21 1268|5,2 reject_low 7 ALIGNMENT 0 YS2-8p19.q1k chr13 658 163 924305 924304 C 496 0.00 1280 reject_low 20 ALIGNMENT 0 YS2-8p19.p1k chr16 778 779 3526 3990 C 0 0.00 1268 reject_low 8 ALIGNMENT 213 YS2-8p19.q1k chr12 1086 564 1077658 1078174 C 523 82.79 1280 ambiguous_tel 0 ALIGNMENT 29 YS2-8p19.p1k chr12 702 734 1074074 1074106 F 33 96.97 1268|0,5 ambiguous_tel 0 ALIGNMENT 415 YS2-8p19.p1k chr02 1255 603 3569 4210 C 653 89.43 1268 reject_low 18 ALIGNMENT 0 YS2-8p19.p1k chr08 602 92 3742 3741 C 511 0.00 1268 reject_low 16 ALIGNMENT 154 YS2-8p19.p1k chr12 488 659 1067127 1067298 F 172 97.09 1268 reject_low 5 ALIGNMENT 0 YS2-8p19.p1k chr04 779 778 1527981 1528445 F 0 0.00 1268 ambiguous_tel 2 ALIGNMENT 257 YS2-8p19.p1k chr15 777 1255 1087609 1088076 F 479 86.64 1268|2,0 reject_low 6 ALIGNMENT 0 YS2-8p19.p1k chr04 660 675 1527761 1527822 F 16 0.00 1268 ambiguous_tel 2 ALIGNMENT 0 YS2-8p19.p1k chr14 778 779 3617 4081 C 0 0.00 1268 reject_low 4 ALIGNMENT 22 YS2-8p19.p1k chr12 676 700 1074024 1074048 F 25 96.00 1268 ambiguous_tel 0 ALIGNMENT 0 YS2-8p19.p1k chr05 778 779 3681 4164 C 0 0.00 1268 reject_low 14 ALIGNMENT 0 YS2-8p19.p1k chr15 730 729 1087066 1087096 F 0 0.00 1268 reject_low 6 ALIGNMENT 0 YS2-8p19.p1k chr14 701 701 4190 4214 C 1 0.00 1268 reject_low 4 ALIGNMENT 0 YS2-8p19.p1k chr16 701 701 4099 4123 C 1 0.00 1268 reject_low 8 ALIGNMENT 0 YS2-8p19.p1k chr12 701 701 1074049 1074073 F 1 0.00 1268 ambiguous_tel 0 ALIGNMENT 53 YS2-8p19.p1k chr07 725 780 1086833 1086888 F 56 98.21 1268|5,2 reject_low 9 ALIGNMENT 0 YS2-8p19.p1k chr07 660 675 1086667 1086728 F 16 0.00 1268 reject_low 9 ALIGNMENT 0 YS2-8p19.q1k chr10 360 658 60 59 F 299 0.00 1280 reject_low 31 ALIGNMENT 0 YS2-8p19.p1k chr15 660 675 1086926 1086987 F 16 0.00 1268 reject_low 6 ALIGNMENT 52 YS2-8p19.p1k chr09 777 725 4471 4523 C 53 100.00 1268|0,5 ambiguous_tel 1 reject_low 30 ALIGNMENT 56 YS2-8p19.p1k chr05 780 725 4163 4218 C 56 100.00 1268|2,0 reject_low 14 ALIGNMENT 584 YS2-8p19.p1k chr12 33 659 1073334 1073961 F 627 98.09 1268 ambiguous_tel 0 ALIGNMENT 319 YS2-8p19.q1k chr13 395 1065 6 680 F 671 84.95 1280 reject_low 11 ALIGNMENT 250 YS2-8p19.p1k chr14 1131 777 3264 3618 C 355 90.99 1268|0,2 reject_low 4 ALIGNMENT 0 YS2-8p19.q1k chr11 62 186 5 4 F 125 0.00 1280 reject_low 25 ALIGNMENT 29 YS2-8p19.p1k chr09 734 702 4545 4577 C 33 96.97 1268|5,0 ambiguous_tel 1 reject_low 30 ALIGNMENT 318 YS2-8p19.p1k chr12 33 377 1066750 1067095 F 345 97.68 1268 reject_low 5 ALIGNMENT 568 YS2-8p19.p1k chr09 659 33 4690 5318 C 627 97.29 1268 ambiguous_tel 1 ALIGNMENT 0 YS2-8p19.q1k chr14 658 368 784041 784040 C 291 0.00 1280 reject_low 23 ALIGNMENT 578 YS2-8p19.p1k chr14 659 33 4302 4929 C 627 97.77 1268 reject_low 4 ALIGNMENT 29 YS2-8p19.p1k chr04 702 734 1527873 1527905 F 33 96.97 1268|0,5 ambiguous_tel 2 ALIGNMENT 421 YS2-8p19.p1k chr06 1255 603 2405 3046 C 653 89.74 1268 reject_low 17 ALIGNMENT 0 YS2-8p19.p1k chr14 729 730 4131 4161 C 0 0.00 1268 reject_low 4 ALIGNMENT 248 YS2-8p19.p1k chr05 1255 777 3215 3682 C 479 86.01 1268|0,2 reject_low 14 ALIGNMENT 0 YS2-8p19.p1k chr12 602 92 9545 9544 C 511 0.00 1268 reject_low 13 ALIGNMENT 0 YS2-8p19.p1k chr16 92 602 944168 944167 F 511 0.00 1268 reject_low 15 ALIGNMENT 427 YS2-8p19.p1k chr16 603 1255 944168 944809 F 653 90.05 1268 reject_low 15 ALIGNMENT 318 YS2-8p19.p1k chr05 377 33 4588 4933 C 345 97.68 1268 reject_low 14 ALIGNMENT 245 YS2-8p19.p1k chr09 1255 777 3539 4006 C 479 85.80 1268|0,1 ambiguous_tel 1 ALIGNMENT 0 YS2-8p19.p1k chr05 730 729 572730 572760 F 0 0.00 1268 reject_low 7 ALIGNMENT 250 YS2-8p19.p1k chr07 777 1131 1087350 1087704 F 355 90.99 1268|2,0 reject_low 9 ALIGNMENT 0 YS2-8p19.p1k chr06 602 92 3047 3046 C 511 0.00 1268 reject_low 17 ALIGNMENT 0 YS2-8p19.p1k chr08 92 602 558621 558620 F 511 0.00 1268 reject_low 10 ALIGNMENT 0 YS2-8p19.p1k chr12 779 778 1067519 1067983 F 0 0.00 1268 reject_low 5 ALIGNMENT 0 YS2-8p19.p1k chr09 729 730 4519 4549 C 0 0.00 1268 ambiguous_tel 1 reject_low 30 ALIGNMENT 0 YS2-8p19.p1k chr12 378 435 1067096 1067093 F 58 0.00 1268 reject_low 5 ALIGNMENT 578 YS2-8p19.p1k chr16 659 33 4211 4838 C 627 97.77 1268 reject_low 8 ALIGNMENT 427 YS2-8p19.p1k chr13 1255 603 3244 3885 C 653 90.05 1268 reject_low 11 ALIGNMENT 53 YS2-8p19.p1k chr15 725 780 1087092 1087147 F 56 98.21 1268|5,2 reject_low 6 ALIGNMENT 0 YS2-8p19.p1k chr02 602 92 4211 4210 C 511 0.00 1268 reject_low 18 ALIGNMENT 353 YS2-8p19.q1k chr08 1086 239 561810 562643 C 848 84.67 1280 reject_low 10 ALIGNMENT 0 YS2-8p19.p1k chr07 779 778 1086887 1087351 F 0 0.00 1268 reject_low 9 ALIGNMENT 0 YS2-8p19.p1k chr10 675 92 4611 4610 C 584 0.00 1268 reject_low 31 ALIGNMENT 53 YS2-8p19.p1k chr04 725 780 1527927 1527982 F 56 98.21 1268|5,2 ambiguous_tel 2 ALIGNMENT 257 YS2-8p19.p1k chr04 777 1255 1528444 1528911 F 479 86.64 1268|2,0 ambiguous_tel 2 ALIGNMENT 399 YS2-8p19.q1k chr10 380 1065 5 682 F 686 88.19 1280 ambiguous_tel 3 ALIGNMENT 0 YS2-8p19.q1k chr14 658 284 784051 784050 C 375 0.00 1280 reject_low 21 ALIGNMENT 0 YS2-8p19.p1k chr14 675 660 4240 4301 C 16 0.00 1268 reject_low 4 ALIGNMENT 29 YS2-8p19.p1k chr10 734 702 4528 4560 C 33 96.97 1268|5,0 ambiguous_tel 3 reject_low 31 ALIGNMENT 0 YS2-8p19.p1k chr16 729 730 4040 4070 C 0 0.00 1268 reject_low 8 ALIGNMENT 568 YS2-8p19.p1k chr10 659 33 4673 5301 C 627 97.29 1268 ambiguous_tel 3 ALIGNMENT 0 YS2-8p19.q1k chr12 563 62 1078175 1078174 C 502 0.00 1280 ambiguous_tel 0 ALIGNMENT 29 YS2-8p19.p1k chr05 702 734 572702 572734 F 33 96.97 1268|0,5 reject_low 7 ALIGNMENT 0 YS2-8p19.p1k chr13 602 92 3886 3885 C 511 0.00 1268 reject_low 11 ALIGNMENT 29 YS2-8p19.p1k chr15 702 734 1087038 1087070 F 33 96.97 1268|0,5 reject_low 6 ALIGNMENT 28 YS2-8p19.q1k chr11 58 124 2 68 F 67 94.03 1280 reject_low 22 ALIGNMENT 415 YS2-8p19.p1k chr08 603 1255 558621 559262 F 653 89.43 1268 reject_low 10 ALIGNMENT 0 YS2-8p19.p1k chr09 675 92 4628 4627 C 584 0.00 1268 reject_low 30 ALIGNMENT 0 YS2-8p19.p1k chr09 777 778 4006 4470 C 0 0.00 1268 ambiguous_tel 1 ALIGNMENT 0 YS2-8p19.q1k chr03 157 62 316615 316614 C 96 0.00 1280 reject_low 19 ALIGNMENT 0 YS2-8p19.p1k chr12 602 92 4010 4009 C 511 0.00 1268 reject_low 12 ALIGNMENT 0 YS2-8p19.p1k chr12 471 487 1067129 1067126 F 17 0.00 1268 reject_low 5 ALIGNMENT 0 YS2-8p19.p1k chr10 729 730 4502 4532 C 0 0.00 1268 ambiguous_tel 3 reject_low 31 ALIGNMENT 0 YS2-8p19.q1k chr12 186 658 11357 11356 F 473 0.00 1280 reject_low 24 ALIGNMENT 0 YS2-8p19.p1k chr05 779 778 572810 573274 F 0 0.00 1268 reject_low 7 ALIGNMENT 0 YS2-8p19.q1k chr12 433 62 1071647 1071646 C 372 0.00 1280 reject_low 5 ALIGNMENT 29 YS2-8p19.p1k chr14 734 702 4157 4189 C 33 96.97 1268|5,0 reject_low 4 ALIGNMENT 0 YS2-8p19.p1k chr05 487 471 4557 4554 C 17 0.00 1268 reject_low 14 ALIGNMENT 22 YS2-8p19.q1k chr08 386 233 556834 556985 C 154 88.31 1280 reject_low 26 ALIGNMENT 0 YS2-8p19.q1k chr09 360 658 77 76 F 299 0.00 1280 reject_low 30 ALIGNMENT 0 YS2-8p19.q1k chr08 658 387 556835 556834 C 272 0.00 1280 reject_low 26 ALIGNMENT 53 YS2-8p19.p1k chr16 780 725 3989 4044 C 56 98.21 1268|2,5 reject_low 8 ALIGNMENT 0 YS2-8p19.q1k chr12 62 326 11206 11205 F 265 0.00 1280 reject_low 28 ALIGNMENT 0 YS2-8p19.p1k chr15 779 778 1087146 1087610 F 0 0.00 1268 reject_low 6 ALIGNMENT 0 YS2-8p19.p1k chr12 660 675 1073962 1074023 F 16 0.00 1268 ambiguous_tel 0 ALIGNMENT 22 YS2-8p19.q1k chr11 187 248 5 68 F 62 93.55 1280 reject_low 25 ALIGNMENT 56 YS2-8p19.p1k chr12 725 780 1067465 1067520 F 56 100.00 1268|0,2 reject_low 5 ALIGNMENT 29 YS2-8p19.p1k chr07 702 734 1086779 1086811 F 33 96.97 1268|0,5 reject_low 9 ALIGNMENT 0 YS2-8p19.p1k chr10 777 778 3989 4453 C 0 0.00 1268 ambiguous_tel 3 ALIGNMENT 0 YS2-8p19.p1k chr05 724 706 4219 4292 C 19 0.00 1268 reject_low 14 ALIGNMENT 578 YS2-8p19.p1k chr05 33 659 571962 572589 F 627 97.77 1268 reject_low 7 ALIGNMENT 0 YS2-8p19.q1k chr12 439 658 11316 11315 F 220 0.00 1280 reject_low 28 ALIGNMENT 0 YS2-8p19.p1k chr05 660 675 572590 572651 F 16 0.00 1268 reject_low 7 ALIGNMENT 0 YS2-8p19.p1k chr09 795 778 4472 4471 C 18 0.00 1268 reject_low 30 ALIGNMENT 0 YS2-8p19.q1k chr11 125 658 68 67 F 534 0.00 1280 reject_low 22 ALIGNMENT 0 YS2-8p19.q1k chr09 62 362 5 4 F 301 0.00 1280 ambiguous_tel 1 ALIGNMENT 584 YS2-8p19.p1k chr15 33 659 1086298 1086925 F 627 98.09 1268 reject_low 6 ALIGNMENT 0 YS2-8p19.p1k chr12 660 675 1067299 1067360 F 16 0.00 1268 reject_low 5 ALIGNMENT 0 YS2-8p19.p1k chr16 675 660 4149 4210 C 16 0.00 1268 reject_low 8 ALIGNMENT 0 YS2-8p19.q1k chr03 658 251 316520 316519 C 408 0.00 1280 reject_low 19 ALIGNMENT 29 YS2-8p19.p1k chr16 734 702 4066 4098 C 33 96.97 1268|5,0 reject_low 8 ALIGNMENT 0 YS2-8p19.q1k chr06 84 62 270146 270145 C 23 0.00 1280 reject_low 29 ALIGNMENT 22 YS2-8p19.p1k chr05 676 700 572652 572676 F 25 96.00 1268 reject_low 7 ALIGNMENT 0 YS2-8p19.p1k chr07 730 729 1086807 1086837 F 0 0.00 1268 reject_low 9 ALIGNMENT 974 YS2-8p20.p1k chr14 50 1180 347000 348130 F 1131 96.82 1190 accept 0 ALIGNMENT 961 YS2-8p20.q1k chr14 1142 33 350690 351796 C 1110 96.67 1153 accept 0 ALIGNMENT 0 YS2-8p21.q1k chr05 872 715 269415 269414 C 158 0.00 872 reject_low 3 ALIGNMENT 0 YS2-8p21.p1k chr05 520 838 269751 269750 F 319 0.00 1243 reject_low 2 ALIGNMENT 0 YS2-8p21.p1k vc_5 879 62 5026 5025 C 818 0.00 1243 reject_low 8 ALIGNMENT 0 YS2-8p21.p1k vc_3 879 62 2473 2472 C 818 0.00 1243 reject_low 12 ALIGNMENT 0 YS2-8p21.p1k vc_7 62 879 100 99 F 818 0.00 1243 reject_low 9 ALIGNMENT 0 YS2-8p21.p1k chr05 62 182 269414 269413 F 121 0.00 1243 reject_low 2 ALIGNMENT 117 YS2-8p21.p1k vc_7 880 1121 100 343 F 242 83.88 1243 reject_low 9 ALIGNMENT 117 YS2-8p21.p1k vc_3 1121 880 1862 2105 C 242 83.88 1243 reject_low 6 ALIGNMENT 117 YS2-8p21.p1k vc_4 880 1121 5871 6114 F 242 83.88 1243 reject_low 7 ALIGNMENT 0 YS2-8p21.p1k vc_1 879 62 2106 2105 C 818 0.00 1243 reject_low 4 ALIGNMENT 775 YS2-8p21.p1k chr09 27 861 256060 256896 F 835 98.56 1243 accept_chi 1 ALIGNMENT 0 YS2-8p21.p1k vc_2 879 62 2106 2105 C 818 0.00 1243 reject_low 5 ALIGNMENT 117 YS2-8p21.p1k vc_2 1121 880 1862 2105 C 242 83.88 1243 reject_low 5 ALIGNMENT 251 YS2-8p21.q1k chr05 714 378 269414 269751 C 337 91.99 872 reject_low 3 ALIGNMENT 794 YS2-8p21.q1k chr09 872 36 256060 256896 C 837 99.16 872 accept_chi 0 ALIGNMENT 117 YS2-8p21.p1k vc_5 1121 880 4782 5025 C 242 83.88 1243 reject_low 8 ALIGNMENT 26 YS2-8p21.p1k vc_1 910 880 2441 2472 C 31 96.77 1243 reject_low 11 ALIGNMENT 0 YS2-8p21.p1k vc_3 879 62 2106 2105 C 818 0.00 1243 reject_low 6 ALIGNMENT 0 YS2-8p21.p1k vc_1 879 62 2473 2472 C 818 0.00 1243 reject_low 11 ALIGNMENT 0 YS2-8p21.p1k vc_4 62 879 5871 5870 F 818 0.00 1243 reject_low 7 ALIGNMENT 251 YS2-8p21.p1k chr05 183 519 269414 269751 F 337 91.99 1243 reject_low 2 ALIGNMENT 0 YS2-8p21.p1k vc_7 62 879 13562 13561 F 818 0.00 1243 reject_low 10 ALIGNMENT 117 YS2-8p21.p1k vc_1 1121 880 1862 2105 C 242 83.88 1243 reject_low 4 ALIGNMENT 26 YS2-8p21.p1k vc_3 910 880 2441 2472 C 31 96.77 1243 reject_low 12 ALIGNMENT 0 YS2-8p21.q1k chr05 377 62 269752 269751 C 316 0.00 872 reject_low 3 ALIGNMENT 117 YS2-8p21.p1k vc_7 880 1121 13562 13805 F 242 83.88 1243 reject_low 10 ALIGNMENT 993 YS2-8p22.p1k chr02 1236 37 229784 230990 C 1200 95.17 1237 accept_trans 0 ALIGNMENT 919 YS2-8p22.q1k chr02 37 1122 219559 220642 F 1086 95.95 1126 accept_trans 0 ALIGNMENT 603 YS2-8p23.p1k chr09 47 872 256073 256893 F 826 92.13 1315 accept 0 ALIGNMENT 0 YS2-8p23.p1k chr05 534 549 269751 269750 F 16 0.00 1315 reject_low 1 ALIGNMENT 231 YS2-8p23.p1k chr05 196 533 269414 269751 F 338 89.64 1315 reject_low 1 ALIGNMENT 969 YS2-8p24.q1k chr02 1083 36 535438 536488 C 1048 98.47 1087 accept 0 ALIGNMENT 922 YS2-8p24.p1k chr02 37 1177 532247 533385 F 1141 95.00 1185 accept 0 ALIGNMENT 681 YS2-9a01.q1k chr05 929 31 65918 66816 C 899 92.32 1300 accept 0 ALIGNMENT 1012 YS2-9a03.q1k chr08 38 1155 280548 281664 F 1118 97.76 1225 accept 0 ALIGNMENT 938 YS2-9a04.p1k chr15 1142 36 881163 882268 C 1107 95.21 1172 accept 0 ALIGNMENT 939 YS2-9a04.q1k chr15 35 1149 879126 880241 F 1115 95.52 1159 accept 0 ALIGNMENT 985 YS2-9a05.q1k chr04 1142 28 1414510 1415628 C 1115 96.86 1221 accept 0 ALIGNMENT 968 YS2-9a05.p1k chr04 29 1115 1409634 1410721 F 1087 96.69 1154 accept 0 ALIGNMENT 945 YS2-9a06.q1k chr12 1105 33 727313 728393 C 1073 96.83 1133 accept 0 ALIGNMENT 982 YS2-9a06.p1k chr12 35 1163 725661 726793 F 1129 96.55 1170 accept 0 ALIGNMENT 990 YS2-9a07.p1k chr13 1195 39 560280 561423 C 1157 96.46 1209 accept 0 ALIGNMENT 1057 YS2-9a07.q1k chr13 32 1217 556461 557652 F 1186 96.96 1307 accept 0 ALIGNMENT 0 YS2-9a09.q1k chr12 869 543 489755 489754 C 327 0.00 1236 reject_low 3 ALIGNMENT 77 YS2-9a09.p1k chr06 947 839 31622 31731 C 109 91.74 1153 reject_low 4 ALIGNMENT 755 YS2-9a09.p1k chr12 34 1139 458542 459609 F 1106 92.68 1153 accept 0 ALIGNMENT 918 YS2-9a09.q1k chr12 1197 38 460232 461427 C 1160 94.40 1236 accept 0 ALIGNMENT 0 YS2-9a09.p1k chr06 838 62 31732 31731 C 777 0.00 1153 reject_low 4 ALIGNMENT 769 YS2-9a09.q1k chr12 897 38 451419 452290 C 860 97.44 1236 reject_low 2 ALIGNMENT 755 YS2-9a09.p1k chr12 34 1139 467679 468746 F 1106 92.68 1153 reject_low 1 ALIGNMENT 483 YS2-9a09.q1k chr12 542 38 489754 490258 C 505 98.81 1236 reject_low 3 ALIGNMENT 180 YS2-9a11.p1k chr13 37 217 490000 490180 F 181 100.00 236 accept_chi 1 ALIGNMENT 0 YS2-9a11.q1k chr13 264 224 489996 489995 C 41 0.00 264 accept_chi 0 ALIGNMENT 0 YS2-9a11.q1k vc_3 223 62 2513 2512 C 162 0.00 264 reject_low 3 ALIGNMENT 0 YS2-9a11.q1k vc_5 225 62 5064 5063 C 164 0.00 264 reject_low 5 ALIGNMENT 38 YS2-9a11.q1k vc_7 227 264 13525 13562 F 38 100.00 264 reject_low 6 ALIGNMENT 0 YS2-9a11.q1k vc_1 223 62 2513 2512 C 162 0.00 264 reject_low 2 ALIGNMENT 185 YS2-9a11.q1k chr13 223 38 489995 490180 C 186 100.00 264 accept_chi 0 ALIGNMENT 41 YS2-9a11.q1k vc_1 264 224 2472 2512 C 41 100.00 264 reject_low 2 ALIGNMENT 0 YS2-9a11.p1k chr13 218 236 490180 490179 F 19 0.00 236 accept_chi 1 ALIGNMENT 39 YS2-9a11.q1k vc_5 264 226 5025 5063 C 39 100.00 264 reject_low 5 ALIGNMENT 41 YS2-9a11.q1k vc_3 264 224 2472 2512 C 41 100.00 264 reject_low 3 ALIGNMENT 41 YS2-9a11.q1k vc_4 224 264 5831 5871 F 41 100.00 264 reject_low 4 ALIGNMENT 36 YS2-9a11.q1k vc_5 261 226 1 36 C 36 100.00 264 reject_low 7 ALIGNMENT 0 YS2-9a11.q1k vc_7 62 226 13525 13524 F 165 0.00 264 reject_low 6 ALIGNMENT 0 YS2-9a11.q1k vc_5 225 62 37 36 C 164 0.00 264 reject_low 7 ALIGNMENT 0 YS2-9a11.q1k vc_4 62 223 5831 5830 F 162 0.00 264 reject_low 4 ALIGNMENT 0 YS2-9a13.p1k chr04 789 62 1385499 1385498 C 728 0.00 1130 reject_low 2 ALIGNMENT 22 YS2-9a13.p1k chr07 822 790 307183 307215 C 33 100.00 1130 reject_low 1 ALIGNMENT 0 YS2-9a13.p1k chr07 789 62 307216 307215 C 728 0.00 1130 reject_low 1 ALIGNMENT 1043 YS2-9a13.q1k chr06 1228 39 65925 67114 C 1190 96.81 1377 accept 0 ALIGNMENT 20 YS2-9a13.p1k chr04 823 790 1385465 1385498 C 34 97.06 1130 reject_low 2 ALIGNMENT 874 YS2-9a13.p1k chr06 29 1130 62122 63222 F 1102 95.01 1130 accept 0 ALIGNMENT 892 YS2-9a14.p1k chr10 32 989 261189 262145 F 958 98.75 1216 accept 0 ALIGNMENT 917 YS2-9a14.q1k chr10 1146 35 262369 263471 C 1112 96.22 1166 accept 0 ALIGNMENT 41 YS2-9a15.q1k vc_3 256 216 2472 2512 C 41 100.00 256 reject_low 4 ALIGNMENT 41 YS2-9a15.q1k vc_2 256 216 2105 2145 C 41 100.00 256 reject_low 3 ALIGNMENT 36 YS2-9a15.q1k vc_5 253 218 1 36 C 36 100.00 256 reject_low 8 ALIGNMENT 150 YS2-9a15.p1k chr10 31 203 78348 78523 F 173 97.69 221 accept_chi 1 ALIGNMENT 0 YS2-9a15.q1k vc_1 215 62 2513 2512 C 154 0.00 256 reject_low 2 ALIGNMENT 38 YS2-9a15.q1k vc_7 219 256 13525 13562 F 38 100.00 256 reject_low 7 ALIGNMENT 0 YS2-9a15.q1k vc_5 217 62 5064 5063 C 156 0.00 256 reject_low 6 ALIGNMENT 0 YS2-9a15.q1k vc_2 215 62 2146 2145 C 154 0.00 256 reject_low 3 ALIGNMENT 0 YS2-9a15.q1k chr10 256 216 78349 78348 C 41 0.00 256 accept_chi 0 ALIGNMENT 0 YS2-9a15.q1k vc_4 62 215 5831 5830 F 154 0.00 256 reject_low 5 ALIGNMENT 0 YS2-9a15.q1k vc_7 62 218 13525 13524 F 157 0.00 256 reject_low 7 ALIGNMENT 41 YS2-9a15.q1k vc_1 256 216 2472 2512 C 41 100.00 256 reject_low 2 ALIGNMENT 39 YS2-9a15.q1k vc_5 256 218 5025 5063 C 39 100.00 256 reject_low 6 ALIGNMENT 0 YS2-9a15.p1k chr10 204 221 78523 78522 F 18 0.00 221 accept_chi 1 ALIGNMENT 0 YS2-9a15.q1k vc_5 217 62 37 36 C 156 0.00 256 reject_low 8 ALIGNMENT 0 YS2-9a15.q1k vc_3 215 62 2513 2512 C 154 0.00 256 reject_low 4 ALIGNMENT 163 YS2-9a15.q1k chr10 215 43 78348 78520 C 173 99.42 256 accept_chi 0 ALIGNMENT 41 YS2-9a15.q1k vc_4 216 256 5831 5871 F 41 100.00 256 reject_low 5 ALIGNMENT 171 YS2-9a18.p1k chr09 304 881 341438 342016 F 578 78.20 1265 accept 0 ALIGNMENT 927 YS2-9a19.p1k chr02 1139 30 62806 63925 C 1110 95.68 1148 accept 0 ALIGNMENT 933 YS2-9a19.q1k chr02 39 1139 61133 62237 F 1101 95.46 1191 accept 0 ALIGNMENT 870 YS2-9a21.q1k chr12 1120 56 467097 468153 C 1065 95.40 1127 accept 1 ALIGNMENT 946 YS2-9a21.p1k chr12 34 1093 463352 464410 F 1060 96.51 1093 accept 1 ALIGNMENT 946 YS2-9a21.p1k chr12 34 1093 454215 455273 F 1060 96.51 1093 accept 0 ALIGNMENT 870 YS2-9a21.q1k chr12 1120 56 457960 459016 C 1065 95.40 1127 accept 0 ALIGNMENT 878 YS2-9a24.p1k chr04 984 34 561943 562887 C 951 98.63 1098 accept 0 ALIGNMENT 0 YS2-9b01.q1k vc_1 255 62 2513 2512 C 194 0.00 296 reject_low 2 ALIGNMENT 219 YS2-9b01.q1k chr10 27 255 598003 598231 F 229 99.13 296 accept_chi 0 ALIGNMENT 0 YS2-9b01.q1k vc_5 257 62 37 36 C 196 0.00 296 reject_low 7 ALIGNMENT 38 YS2-9b01.q1k vc_7 259 296 13525 13562 F 38 100.00 296 reject_low 6 ALIGNMENT 41 YS2-9b01.q1k vc_3 296 256 2472 2512 C 41 100.00 296 reject_low 3 ALIGNMENT 0 YS2-9b01.q1k vc_4 62 255 5831 5830 F 194 0.00 296 reject_low 4 ALIGNMENT 0 YS2-9b01.q1k vc_7 62 258 13525 13524 F 197 0.00 296 reject_low 6 ALIGNMENT 211 YS2-9b01.p1k chr10 253 29 598003 598228 C 225 98.67 270 accept_chi 1 ALIGNMENT 0 YS2-9b01.q1k chr10 256 296 598231 598230 F 41 0.00 296 accept_chi 0 ALIGNMENT 39 YS2-9b01.q1k vc_5 296 258 5025 5063 C 39 100.00 296 reject_low 5 ALIGNMENT 41 YS2-9b01.q1k vc_1 296 256 2472 2512 C 41 100.00 296 reject_low 2 ALIGNMENT 0 YS2-9b01.q1k vc_5 257 62 5064 5063 C 196 0.00 296 reject_low 5 ALIGNMENT 0 YS2-9b01.p1k chr10 270 254 598004 598003 C 17 0.00 270 accept_chi 1 ALIGNMENT 36 YS2-9b01.q1k vc_5 293 258 1 36 C 36 100.00 296 reject_low 7 ALIGNMENT 0 YS2-9b01.q1k vc_3 255 62 2513 2512 C 194 0.00 296 reject_low 3 ALIGNMENT 41 YS2-9b01.q1k vc_4 256 296 5831 5871 F 41 100.00 296 reject_low 4 ALIGNMENT 266 YS2-9b02.p1k chr12 616 1028 489754 490153 F 413 90.80 1251 reject_low 2 ALIGNMENT 926 YS2-9b02.q1k chr12 1109 31 455041 456107 C 1079 96.48 1166 reject_low 1 ALIGNMENT 0 YS2-9b02.p1k chr12 62 615 489754 489753 F 554 0.00 1251 reject_low 2 ALIGNMENT 549 YS2-9b02.p1k chr12 261 1028 451419 452185 F 768 92.97 1251 reject_low 1 ALIGNMENT 926 YS2-9b02.q1k chr12 1109 31 464178 465244 C 1079 96.48 1166 accept 0 ALIGNMENT 0 YS2-9b02.p1k chr12 62 260 451419 451418 F 199 0.00 1251 reject_low 1 ALIGNMENT 719 YS2-9b02.p1k chr12 47 1028 460332 461322 F 982 93.28 1251 accept 0 ALIGNMENT 990 YS2-9b03.q1k chr01 27 1164 173285 174429 F 1138 96.05 1165 accept 0 ALIGNMENT 886 YS2-9b03.p1k chr01 1140 37 175361 176473 C 1104 94.84 1140 accept 0 ALIGNMENT 0 YS2-9b04.q1k chr13 441 481 540900 540899 F 41 0.00 481 accept_chi 1 ALIGNMENT 41 YS2-9b04.q1k vc_3 481 441 2472 2512 C 41 100.00 481 reject_low 3 ALIGNMENT 402 YS2-9b04.q1k chr13 38 440 540498 540900 F 403 100.00 481 accept_chi 1 ALIGNMENT 0 YS2-9b04.q1k vc_1 440 62 2513 2512 C 379 0.00 481 reject_low 2 ALIGNMENT 36 YS2-9b04.q1k vc_5 478 443 1 36 C 36 100.00 481 reject_low 7 ALIGNMENT 38 YS2-9b04.q1k vc_7 444 481 13525 13562 F 38 100.00 481 reject_low 6 ALIGNMENT 39 YS2-9b04.q1k vc_5 481 443 5025 5063 C 39 100.00 481 reject_low 5 ALIGNMENT 0 YS2-9b04.q1k vc_7 62 443 13525 13524 F 382 0.00 481 reject_low 6 ALIGNMENT 402 YS2-9b04.p1k chr13 438 36 540498 540900 C 403 100.00 457 accept_chi 0 ALIGNMENT 0 YS2-9b04.p1k chr13 457 439 540499 540498 C 19 0.00 457 accept_chi 0 ALIGNMENT 0 YS2-9b04.q1k vc_5 442 62 37 36 C 381 0.00 481 reject_low 7 ALIGNMENT 0 YS2-9b04.q1k vc_5 442 62 5064 5063 C 381 0.00 481 reject_low 5 ALIGNMENT 0 YS2-9b04.q1k vc_3 440 62 2513 2512 C 379 0.00 481 reject_low 3 ALIGNMENT 0 YS2-9b04.q1k vc_4 62 440 5831 5830 F 379 0.00 481 reject_low 4 ALIGNMENT 41 YS2-9b04.q1k vc_1 481 441 2472 2512 C 41 100.00 481 reject_low 2 ALIGNMENT 41 YS2-9b04.q1k vc_4 441 481 5831 5871 F 41 100.00 481 reject_low 4 ALIGNMENT 0 YS2-9b05.q1k vc_3 1036 62 2498 2497 C 975 0.00 1153 reject_low 2 ALIGNMENT 0 YS2-9b05.q1k vc_1 1036 62 2498 2497 C 975 0.00 1153 reject_low 1 ALIGNMENT 26 YS2-9b05.q1k vc_7 1037 1062 13537 13562 F 26 100.00 1153 reject_low 3 ALIGNMENT 924 YS2-9b05.q1k chr05 1022 25 41048 42049 C 998 98.00 1153 accept 0 ALIGNMENT 0 YS2-9b05.q1k vc_7 62 1036 13537 13536 F 975 0.00 1153 reject_low 3 ALIGNMENT 26 YS2-9b05.q1k vc_3 1062 1037 2472 2497 C 26 100.00 1153 reject_low 2 ALIGNMENT 26 YS2-9b05.q1k vc_1 1062 1037 2472 2497 C 26 100.00 1153 reject_low 1 ALIGNMENT 962 YS2-9b06.p1k chr13 1158 32 460775 461905 C 1127 96.10 1175 accept 0 ALIGNMENT 897 YS2-9b06.q1k chr13 46 1101 456558 457627 F 1056 96.50 1160 accept 0 ALIGNMENT 846 YS2-9b07.p1k chr06 1024 30 199366 200359 C 995 97.09 1214 accept 0 ALIGNMENT 793 YS2-9b07.q1k chr06 29 976 193814 194752 F 948 95.99 1289 accept 0 ALIGNMENT 974 YS2-9b08.p1k chr16 1180 29 358110 359269 C 1152 95.57 1183 accept 0 ALIGNMENT 902 YS2-9b08.q1k chr16 47 1130 356283 357388 F 1084 95.11 1178 accept 0 ALIGNMENT 936 YS2-9b09.p1k chr07 28 1143 833957 835069 F 1116 96.24 1145 accept 0 ALIGNMENT 940 YS2-9b09.q1k chr07 1140 42 837058 838162 C 1099 95.81 1140 accept 0 ALIGNMENT 246 YS2-9b10.q1k chr04 859 85 1488617 1489376 C 775 79.10 1290 accept 0 ALIGNMENT 981 YS2-9b11.q1k chr04 38 1181 373531 374670 F 1144 96.59 1182 accept 0 ALIGNMENT 989 YS2-9b11.p1k chr04 1166 27 376668 377815 C 1140 96.58 1166 accept 0 ALIGNMENT 604 YS2-9b14.p1k chr02 30 649 698522 699142 F 620 99.52 668 accept_chi 1 ALIGNMENT 0 YS2-9b14.p1k chr02 650 668 699142 699141 F 19 0.00 668 accept_chi 1 ALIGNMENT 609 YS2-9b14.q1k chr02 660 40 698522 699142 C 621 99.68 661 accept_chi 0 ALIGNMENT 962 YS2-9b15.p1k chr15 34 1138 737754 738858 F 1105 96.56 1141 accept 0 ALIGNMENT 865 YS2-9b15.q1k chr15 969 38 742350 743280 C 932 98.61 1134 accept 0 ALIGNMENT 0 YS2-9b15.q1k chr15 245 62 743073 743072 C 184 0.00 1134 reject_low 1 ALIGNMENT 726 YS2-9b15.q1k chr15 1124 246 742201 743072 C 879 95.45 1134 reject_low 1 ALIGNMENT 0 YS2-9b17.q1k chr04 62 704 538725 538724 F 643 0.00 1129 reject_low 5 ALIGNMENT 0 YS2-9b17.q1k chr04 741 782 538760 538759 F 42 0.00 1129 reject_low 5 ALIGNMENT 0 YS2-9b17.p1k chr13 232 62 239389 239388 C 171 0.00 1103 reject_low 2 ALIGNMENT 176 YS2-9b17.q1k chr09 742 962 419477 419699 F 221 95.93 1129 reject_low 1 ALIGNMENT 21 YS2-9b17.p1k chr04 289 254 538725 538760 C 36 97.22 1103 reject_low 4 ALIGNMENT 0 YS2-9b17.p1k chr13 815 268 239355 239354 C 548 0.00 1103 reject_low 2 ALIGNMENT 0 YS2-9b17.p1k chr04 253 62 538761 538760 C 192 0.00 1103 reject_low 4 ALIGNMENT 0 YS2-9b17.q1k chr09 62 741 419477 419476 F 680 0.00 1129 reject_low 1 ALIGNMENT 22 YS2-9b17.p1k chr13 267 233 239354 239388 C 35 100.00 1103 reject_low 2 ALIGNMENT 0 YS2-9b17.p1k chr09 267 253 419494 419476 C 15 0.00 1103 reject_bad_break 0 ALIGNMENT 180 YS2-9b17.p1k chr09 252 39 419477 419692 C 214 97.66 1103 reject_bad_break 0 ALIGNMENT 0 YS2-9b17.q1k chr13 762 782 239388 239387 F 21 0.00 1129 reject_low 3 ALIGNMENT 22 YS2-9b17.q1k chr13 727 761 239354 239388 F 35 100.00 1129 reject_low 3 ALIGNMENT 627 YS2-9b17.p1k chr09 951 268 418811 419493 C 684 98.68 1103 reject_bad_break 0 ALIGNMENT 0 YS2-9b17.q1k chr13 62 726 239354 239353 F 665 0.00 1129 reject_low 3 ALIGNMENT 0 YS2-9b17.q1k chr09 727 782 419493 419492 F 56 0.00 1129 reject_bad_break 0 ALIGNMENT 0 YS2-9b17.p1k chr04 815 290 538726 538725 C 526 0.00 1103 reject_low 4 ALIGNMENT 21 YS2-9b17.q1k chr04 705 740 538725 538760 F 36 97.22 1129 reject_low 5 ALIGNMENT 647 YS2-9b17.q1k chr09 38 726 418804 419493 F 689 99.27 1129 reject_bad_break 0 ALIGNMENT 0 YS2-9b18.q1k chr07 297 379 1085610 1085609 F 83 0.00 379 reject_low 15 ALIGNMENT 31 YS2-9b18.p1k chr12 231 279 5278 5326 F 49 89.80 357 accept_tel 0 ALIGNMENT 49 YS2-9b18.p1k chr16 139 79 943708 943768 C 61 95.08 357 reject_low 38 ALIGNMENT 49 YS2-9b18.p1k chr02 79 139 4609 4669 F 61 95.08 357 reject_low 12 ALIGNMENT 0 YS2-9b18.p1k chr12 148 140 1072819 1072844 C 9 0.00 357 reject_low 5 ALIGNMENT 0 YS2-9b18.p1k chr12 78 62 1066354 1066353 C 17 0.00 357 reject_low 24 ALIGNMENT 0 YS2-9b18.p1k chr05 62 78 5330 5329 F 17 0.00 357 reject_low 1 ALIGNMENT 42 YS2-9b18.p1k chr12 149 196 4495 4542 F 48 95.83 357 accept_tel 0 ALIGNMENT 0 YS2-9b18.q1k chr08 62 178 558088 558087 F 117 0.00 379 reject_low 19 ALIGNMENT 0 YS2-9b18.q1k chr12 227 379 1072818 1072817 F 153 0.00 379 reject_low 11 ALIGNMENT 41 YS2-9b18.q1k chr16 180 226 943635 943681 F 47 95.74 379 reject_low 39 ALIGNMENT 0 YS2-9b18.q1k chr08 235 227 4201 4226 C 9 0.00 379 reject_low 17 ALIGNMENT 42 YS2-9b18.p1k chr14 149 196 5445 5492 F 48 95.83 357 reject_low 28 ALIGNMENT 0 YS2-9b18.q1k chr09 235 227 5808 5833 C 9 0.00 379 reject_low 21 ALIGNMENT 49 YS2-9b18.q1k chr12 296 236 4408 4468 C 61 95.08 379 reject_low 10 ALIGNMENT 0 YS2-9b18.q1k chr05 178 62 5448 5447 C 117 0.00 379 reject_low 3 ALIGNMENT 41 YS2-9b18.q1k chr15 180 226 1085736 1085782 F 47 95.74 379 reject_low 37 ALIGNMENT 42 YS2-9b18.q1k chr13 226 179 4371 4418 C 48 95.83 379 reject_low 27 ALIGNMENT 0 YS2-9b18.q1k vc_1 338 62 2513 2512 C 277 0.00 379 reject_low 6 ALIGNMENT 0 YS2-9b18.p1k chr10 140 148 5791 5816 F 9 0.00 357 reject_low 22 ALIGNMENT 102 YS2-9b18.p1k chr05 196 79 571416 571533 C 118 95.76 357 reject_low 2 ALIGNMENT 0 YS2-9b18.p1k chr04 148 140 1526618 1526643 C 9 0.00 357 reject_low 32 ALIGNMENT 0 YS2-9b18.p1k chr05 357 197 571417 571416 C 161 0.00 357 reject_low 2 ALIGNMENT 0 YS2-9b18.p1k chr10 62 78 5730 5729 F 17 0.00 357 reject_low 22 ALIGNMENT 0 YS2-9b18.p1k chr09 197 357 5881 5880 F 161 0.00 357 reject_low 20 ALIGNMENT 41 YS2-9b18.q1k chr06 226 180 3533 3579 C 47 95.74 379 reject_low 35 ALIGNMENT 0 YS2-9b18.p1k chr16 140 148 5328 5353 F 9 0.00 357 reject_low 30 ALIGNMENT 0 YS2-9b18.p1k chr05 78 62 571534 571533 C 17 0.00 357 reject_low 2 ALIGNMENT 0 YS2-9b18.q1k chr16 297 379 943768 943767 F 83 0.00 379 reject_low 39 ALIGNMENT 0 YS2-9b18.q1k chr12 235 227 4469 4494 C 9 0.00 379 reject_low 10 ALIGNMENT 49 YS2-9b18.q1k chr16 236 296 943708 943768 F 61 95.08 379 reject_low 39 ALIGNMENT 49 YS2-9b18.p1k chr08 139 79 558162 558222 C 61 95.08 357 reject_low 18 ALIGNMENT 41 YS2-9b18.p1k chr15 195 149 1085736 1085782 C 47 95.74 357 reject_low 36 ALIGNMENT 0 YS2-9b18.p1k chr12 357 280 1071987 1071986 C 78 0.00 357 reject_low 5 ALIGNMENT 0 YS2-9b18.p1k chr14 140 148 5419 5444 F 9 0.00 357 reject_low 28 ALIGNMENT 42 YS2-9b18.q1k chr12 226 179 10030 10077 C 48 95.83 379 accept_tel 0 ALIGNMENT 49 YS2-9b18.q1k chr02 296 236 4609 4669 C 61 95.08 379 reject_low 13 ALIGNMENT 42 YS2-9b18.q1k chr02 226 179 4696 4743 C 48 95.83 379 reject_low 13 ALIGNMENT 31 YS2-9b18.q1k chr12 96 144 1071986 1072034 F 49 89.80 379 reject_low 11 ALIGNMENT 42 YS2-9b18.p1k chr08 196 149 558088 558135 C 48 95.83 357 reject_low 18 ALIGNMENT 0 YS2-9b18.q1k chr13 178 62 4419 4418 C 117 0.00 379 reject_low 27 ALIGNMENT 49 YS2-9b18.q1k chr12 236 296 1072845 1072905 F 61 95.08 379 reject_low 25 ALIGNMENT 0 YS2-9b18.q1k chr05 62 178 571416 571415 F 117 0.00 379 reject_low 4 ALIGNMENT 0 YS2-9b18.p1k chr13 62 78 4284 4283 F 17 0.00 357 reject_low 26 ALIGNMENT 49 YS2-9b18.p1k chr07 139 79 1085550 1085610 C 61 95.08 357 reject_low 14 ALIGNMENT 0 YS2-9b18.q1k chr08 178 62 4275 4274 C 117 0.00 379 reject_low 17 ALIGNMENT 0 YS2-9b18.p1k chr11 357 341 666002 666001 C 17 0.00 357 reject_low 9 ALIGNMENT 42 YS2-9b18.p1k chr12 196 149 1066219 1066266 C 48 95.83 357 reject_low 24 ALIGNMENT 0 YS2-9b18.p1k chr08 78 62 558223 558222 C 17 0.00 357 reject_low 18 ALIGNMENT 0 YS2-9b18.p1k chr12 197 230 4543 5277 F 34 0.00 357 accept_tel 0 ALIGNMENT 0 YS2-9b18.p1k chr04 357 196 1526572 1526571 C 162 0.00 357 reject_low 32 ALIGNMENT 0 YS2-9b18.q1k chr04 297 379 1526704 1526703 F 83 0.00 379 reject_low 33 ALIGNMENT 49 YS2-9b18.p1k chr04 139 79 1526644 1526704 C 61 95.08 357 reject_low 32 ALIGNMENT 49 YS2-9b18.q1k chr12 296 236 9943 10003 C 61 95.08 379 accept_tel 0 ALIGNMENT 0 YS2-9b18.q1k chr16 235 227 5328 5353 C 9 0.00 379 reject_low 31 ALIGNMENT 0 YS2-9b18.q1k chr12 379 297 9944 9943 C 83 0.00 379 accept_tel 0 ALIGNMENT 0 YS2-9b18.p1k chr08 197 357 4274 4273 F 161 0.00 357 reject_low 16 ALIGNMENT 49 YS2-9b18.q1k chr16 296 236 5267 5327 C 61 95.08 379 reject_low 31 ALIGNMENT 0 YS2-9b18.p1k chr09 140 148 5808 5833 F 9 0.00 357 reject_low 20 ALIGNMENT 0 YS2-9b18.q1k chr12 235 227 10004 10029 C 9 0.00 379 accept_tel 0 ALIGNMENT 42 YS2-9b18.q1k chr09 226 179 5834 5881 C 48 95.83 379 reject_low 21 ALIGNMENT 0 YS2-9b18.q1k chr04 62 179 1526571 1526570 F 118 0.00 379 reject_low 33 ALIGNMENT 42 YS2-9b18.p1k chr13 149 196 4371 4418 F 48 95.83 357 reject_low 26 ALIGNMENT 0 YS2-9b18.q1k chr02 178 62 4744 4743 C 117 0.00 379 reject_low 13 ALIGNMENT 49 YS2-9b18.q1k chr04 236 296 1526644 1526704 F 61 95.08 379 reject_low 33 ALIGNMENT 0 YS2-9b18.q1k chr09 379 297 5748 5747 C 83 0.00 379 reject_low 21 ALIGNMENT 49 YS2-9b18.p1k chr09 79 139 5747 5807 F 61 95.08 357 reject_low 20 ALIGNMENT 0 YS2-9b18.q1k chr12 227 235 1066267 1072844 F 9 0.00 379 reject_low 25 ALIGNMENT 0 YS2-9b18.q1k chr13 235 227 4345 4370 C 9 0.00 379 reject_low 27 ALIGNMENT 0 YS2-9b18.p1k chr08 140 148 4201 4226 F 9 0.00 357 reject_low 16 ALIGNMENT 0 YS2-9b18.q1k vc_3 338 62 2513 2512 C 277 0.00 379 reject_low 7 ALIGNMENT 0 YS2-9b18.p1k chr06 62 78 3446 3445 F 17 0.00 357 reject_low 34 ALIGNMENT 0 YS2-9b18.p1k chr15 357 196 1085737 1085736 C 162 0.00 357 reject_low 36 ALIGNMENT 30 YS2-9b18.p1k chr11 340 292 666001 666048 C 49 89.80 357 reject_low 9 ALIGNMENT 0 YS2-9b18.p1k chr06 140 148 3507 3532 F 9 0.00 357 reject_low 34 ALIGNMENT 0 YS2-9b18.q1k chr07 227 235 1085524 1085549 F 9 0.00 379 reject_low 15 ALIGNMENT 49 YS2-9b18.q1k chr14 296 236 5358 5418 C 61 95.08 379 reject_low 29 ALIGNMENT 0 YS2-9b18.q1k chr13 379 297 4285 4284 C 83 0.00 379 reject_low 27 ALIGNMENT 41 YS2-9b18.q1k vc_1 379 339 2472 2512 C 41 100.00 379 reject_low 6 ALIGNMENT 42 YS2-9b18.p1k chr08 149 196 4227 4274 F 48 95.83 357 reject_low 16 ALIGNMENT 31 YS2-9b18.q1k chr12 144 96 5278 5326 C 49 89.80 379 reject_low 10 ALIGNMENT 49 YS2-9b18.p1k chr12 139 79 1066293 1066353 C 61 95.08 357 reject_low 24 ALIGNMENT 49 YS2-9b18.q1k chr13 296 236 4284 4344 C 61 95.08 379 reject_low 27 ALIGNMENT 41 YS2-9b18.p1k chr04 195 149 1526571 1526617 C 47 95.74 357 reject_low 32 ALIGNMENT 0 YS2-9b18.p1k chr09 62 78 5747 5746 F 17 0.00 357 reject_low 20 ALIGNMENT 0 YS2-9b18.q1k chr12 227 235 1066267 1066292 F 9 0.00 379 reject_low 5 ALIGNMENT 0 YS2-9b18.q1k chr14 178 62 5493 5492 C 117 0.00 379 reject_low 29 ALIGNMENT 0 YS2-9b18.p1k chr16 148 140 943682 943707 C 9 0.00 357 reject_low 38 ALIGNMENT 49 YS2-9b18.p1k chr06 79 139 3446 3506 F 61 95.08 357 reject_low 34 ALIGNMENT 0 YS2-9b18.q1k chr15 297 379 1085869 1085868 F 83 0.00 379 reject_low 37 ALIGNMENT 0 YS2-9b18.q1k chr14 235 227 5419 5444 C 9 0.00 379 reject_low 29 ALIGNMENT 49 YS2-9b18.q1k chr15 236 296 1085809 1085869 F 61 95.08 379 reject_low 37 ALIGNMENT 0 YS2-9b18.p1k chr16 78 62 943769 943768 C 17 0.00 357 reject_low 38 ALIGNMENT 49 YS2-9b18.p1k chr16 79 139 5267 5327 F 61 95.08 357 reject_low 30 ALIGNMENT 0 YS2-9b18.q1k vc_4 62 338 5831 5830 F 277 0.00 379 reject_low 8 ALIGNMENT 0 YS2-9b18.p1k chr12 280 357 5326 5325 F 78 0.00 357 accept_tel 0 ALIGNMENT 0 YS2-9b18.q1k chr06 179 62 3580 3579 C 118 0.00 379 reject_low 35 ALIGNMENT 0 YS2-9b18.q1k chr08 297 379 558222 558221 F 83 0.00 379 reject_low 19 ALIGNMENT 0 YS2-9b18.p1k chr13 140 148 4345 4370 F 9 0.00 357 reject_low 26 ALIGNMENT 0 YS2-9b18.q1k chr16 379 297 5268 5267 C 83 0.00 379 reject_low 31 ALIGNMENT 49 YS2-9b18.p1k chr12 79 139 9943 10003 F 61 95.08 357 reject_low 23 ALIGNMENT 0 YS2-9b18.q1k chr06 379 297 3447 3446 C 83 0.00 379 reject_low 35 ALIGNMENT 0 YS2-9b18.q1k chr04 227 235 1526618 1526643 F 9 0.00 379 reject_low 33 ALIGNMENT 49 YS2-9b18.p1k chr14 79 139 5358 5418 F 61 95.08 357 reject_low 28 ALIGNMENT 42 YS2-9b18.q1k chr16 226 179 5354 5401 C 48 95.83 379 reject_low 31 ALIGNMENT 41 YS2-9b18.q1k vc_4 339 379 5831 5871 F 41 100.00 379 reject_low 8 ALIGNMENT 49 YS2-9b18.q1k chr12 236 296 1066293 1066353 F 61 95.08 379 reject_low 5 ALIGNMENT 0 YS2-9b18.p1k chr15 148 140 1085783 1085808 C 9 0.00 357 reject_low 36 ALIGNMENT 0 YS2-9b18.q1k chr08 379 297 4141 4140 C 83 0.00 379 reject_low 17 ALIGNMENT 0 YS2-9b18.q1k chr12 297 379 1072905 1072904 F 83 0.00 379 reject_low 25 ALIGNMENT 41 YS2-9b18.p1k chr16 195 149 943635 943681 C 47 95.74 357 reject_low 38 ALIGNMENT 102 YS2-9b18.p1k chr05 79 196 5330 5447 F 118 95.76 357 reject_low 1 ALIGNMENT 49 YS2-9b18.q1k chr07 236 296 1085550 1085610 F 61 95.08 379 reject_low 15 ALIGNMENT 0 YS2-9b18.q1k chr07 62 178 1085476 1085475 F 117 0.00 379 reject_low 15 ALIGNMENT 42 YS2-9b18.p1k chr10 149 196 5817 5864 F 48 95.83 357 reject_low 22 ALIGNMENT 0 YS2-9b18.q1k chr16 227 235 943682 943707 F 9 0.00 379 reject_low 39 ALIGNMENT 0 YS2-9b18.q1k chr16 178 62 5402 5401 C 117 0.00 379 reject_low 31 ALIGNMENT 49 YS2-9b18.q1k chr08 296 236 4140 4200 C 61 95.08 379 reject_low 17 ALIGNMENT 0 YS2-9b18.p1k chr02 62 78 4609 4608 F 17 0.00 357 reject_low 12 ALIGNMENT 0 YS2-9b18.p1k chr05 197 357 5447 5446 F 161 0.00 357 reject_low 1 ALIGNMENT 41 YS2-9b18.p1k chr12 195 149 1072772 1072818 C 47 95.74 357 reject_low 5 ALIGNMENT 0 YS2-9b18.q1k chr12 379 297 4409 4408 C 83 0.00 379 reject_low 10 ALIGNMENT 42 YS2-9b18.p1k chr02 149 196 4696 4743 F 48 95.83 357 reject_low 12 ALIGNMENT 0 YS2-9b18.p1k chr07 357 197 1085477 1085476 C 161 0.00 357 reject_low 14 ALIGNMENT 49 YS2-9b18.p1k chr08 79 139 4140 4200 F 61 95.08 357 reject_low 16 ALIGNMENT 0 YS2-9b18.p1k chr13 197 357 4418 4417 F 161 0.00 357 reject_low 26 ALIGNMENT 0 YS2-9b18.q1k chr12 62 95 1071986 1071985 F 34 0.00 379 reject_low 11 ALIGNMENT 42 YS2-9b18.q1k chr14 226 179 5445 5492 C 48 95.83 379 reject_low 29 ALIGNMENT 102 YS2-9b18.q1k chr05 296 179 5330 5447 C 118 95.76 379 reject_low 3 ALIGNMENT 49 YS2-9b18.p1k chr10 79 139 5730 5790 F 61 95.08 357 reject_low 22 ALIGNMENT 49 YS2-9b18.q1k chr06 296 236 3446 3506 C 61 95.08 379 reject_low 35 ALIGNMENT 42 YS2-9b18.p1k chr12 149 196 10030 10077 F 48 95.83 357 reject_low 23 ALIGNMENT 0 YS2-9b18.p1k chr12 230 196 1072035 1072771 C 35 0.00 357 reject_low 5 ALIGNMENT 0 YS2-9b18.q1k chr12 297 379 1066353 1066352 F 83 0.00 379 reject_low 5 ALIGNMENT 0 YS2-9b18.q1k chr12 62 178 1066219 1066218 F 117 0.00 379 reject_low 5,25 ALIGNMENT 0 YS2-9b18.q1k chr09 178 62 5882 5881 C 117 0.00 379 reject_low 21 ALIGNMENT 0 YS2-9b18.q1k chr05 297 379 571533 571532 F 83 0.00 379 reject_low 4 ALIGNMENT 0 YS2-9b18.q1k chr06 235 227 3507 3532 C 9 0.00 379 reject_low 35 ALIGNMENT 42 YS2-9b18.p1k chr09 149 196 5834 5881 F 48 95.83 357 reject_low 20 ALIGNMENT 42 YS2-9b18.p1k chr07 196 149 1085476 1085523 C 48 95.83 357 reject_low 14 ALIGNMENT 0 YS2-9b18.q1k chr12 178 62 10078 10077 C 117 0.00 379 accept_tel 0 ALIGNMENT 0 YS2-9b18.p1k chr14 62 78 5358 5357 F 17 0.00 357 reject_low 28 ALIGNMENT 0 YS2-9b18.q1k chr12 145 179 1072035 1072771 F 35 0.00 379 reject_low 11 ALIGNMENT 41 YS2-9b18.q1k vc_3 379 339 2472 2512 C 41 100.00 379 reject_low 7 ALIGNMENT 0 YS2-9b18.p1k chr12 197 357 10077 10076 F 161 0.00 357 reject_low 23 ALIGNMENT 42 YS2-9b18.q1k chr12 226 179 4495 4542 C 48 95.83 379 reject_low 10 ALIGNMENT 0 YS2-9b18.p1k chr16 62 78 5267 5266 F 17 0.00 357 reject_low 30 ALIGNMENT 42 YS2-9b18.p1k chr16 149 196 5354 5401 F 48 95.83 357 reject_low 30 ALIGNMENT 41 YS2-9b18.q1k chr12 180 226 1072772 1072818 F 47 95.74 379 reject_low 11 ALIGNMENT 0 YS2-9b18.q1k chr02 235 227 4670 4695 C 9 0.00 379 reject_low 13 ALIGNMENT 31 YS2-9b18.p1k chr12 279 231 1071986 1072034 C 49 89.80 357 reject_low 5 ALIGNMENT 0 YS2-9b18.q1k chr14 379 297 5359 5358 C 83 0.00 379 reject_low 29 ALIGNMENT 0 YS2-9b18.p1k chr12 357 197 1066220 1066219 C 161 0.00 357 reject_low 24 ALIGNMENT 0 YS2-9b18.q1k chr05 379 297 5331 5330 C 83 0.00 379 reject_low 3 ALIGNMENT 0 YS2-9b18.q1k chr12 178 145 4543 5277 C 34 0.00 379 reject_low 10 ALIGNMENT 0 YS2-9b18.p1k chr08 357 197 558089 558088 C 161 0.00 357 reject_low 18 ALIGNMENT 0 YS2-9b18.q1k chr02 379 297 4610 4609 C 83 0.00 379 reject_low 13 ALIGNMENT 42 YS2-9b18.q1k chr12 179 226 1066219 1066266 F 48 95.83 379 reject_low 5,25 ALIGNMENT 49 YS2-9b18.p1k chr15 139 79 1085809 1085869 C 61 95.08 357 reject_low 36 ALIGNMENT 0 YS2-9b18.q1k chr08 227 235 558136 558161 F 9 0.00 379 reject_low 19 ALIGNMENT 42 YS2-9b18.q1k chr07 179 226 1085476 1085523 F 48 95.83 379 reject_low 15 ALIGNMENT 0 YS2-9b18.p1k chr16 197 357 5401 5400 F 161 0.00 357 reject_low 30 ALIGNMENT 0 YS2-9b18.p1k chr12 62 78 9943 9942 F 17 0.00 357 reject_low 23 ALIGNMENT 42 YS2-9b18.q1k chr08 179 226 558088 558135 F 48 95.83 379 reject_low 19 ALIGNMENT 0 YS2-9b18.p1k chr16 357 196 943636 943635 C 162 0.00 357 reject_low 38 ALIGNMENT 0 YS2-9b18.p1k chr08 148 140 558136 558161 C 9 0.00 357 reject_low 18 ALIGNMENT 49 YS2-9b18.p1k chr12 139 79 1072845 1072905 C 61 95.08 357 reject_low 5 ALIGNMENT 0 YS2-9b18.p1k chr12 62 78 4408 4407 F 17 0.00 357 accept_tel 0 ALIGNMENT 49 YS2-9b18.q1k chr09 296 236 5747 5807 C 61 95.08 379 reject_low 21 ALIGNMENT 0 YS2-9b18.p1k chr12 140 148 4469 4494 F 9 0.00 357 accept_tel 0 ALIGNMENT 0 YS2-9b18.p1k chr11 291 62 666049 666048 C 230 0.00 357 reject_low 9 ALIGNMENT 0 YS2-9b18.p1k chr07 78 62 1085611 1085610 C 17 0.00 357 reject_low 14 ALIGNMENT 49 YS2-9b18.p1k chr12 79 139 4408 4468 F 61 95.08 357 accept_tel 0 ALIGNMENT 0 YS2-9b18.q1k chr15 227 235 1085783 1085808 F 9 0.00 379 reject_low 37 ALIGNMENT 0 YS2-9b18.p1k chr14 197 357 5492 5491 F 161 0.00 357 reject_low 28 ALIGNMENT 0 YS2-9b18.q1k chr12 95 62 5327 5326 C 34 0.00 379 reject_low 10 ALIGNMENT 0 YS2-9b18.p1k chr10 197 357 5864 5863 F 161 0.00 357 reject_low 22 ALIGNMENT 41 YS2-9b18.q1k chr04 180 226 1526571 1526617 F 47 95.74 379 reject_low 33 ALIGNMENT 42 YS2-9b18.q1k chr08 226 179 4227 4274 C 48 95.83 379 reject_low 17 ALIGNMENT 49 YS2-9b18.q1k chr08 236 296 558162 558222 F 61 95.08 379 reject_low 19 ALIGNMENT 0 YS2-9b18.p1k chr12 140 148 10004 10029 F 9 0.00 357 reject_low 23 ALIGNMENT 0 YS2-9b18.p1k chr12 148 140 1066267 1066292 C 9 0.00 357 reject_low 24 ALIGNMENT 0 YS2-9b18.p1k chr12 78 62 1072906 1072905 C 17 0.00 357 reject_low 5 ALIGNMENT 0 YS2-9b18.p1k chr04 78 62 1526705 1526704 C 17 0.00 357 reject_low 32 ALIGNMENT 0 YS2-9b18.q1k chr16 62 179 943635 943634 F 118 0.00 379 reject_low 39 ALIGNMENT 41 YS2-9b18.p1k chr06 149 195 3533 3579 F 47 95.74 357 reject_low 34 ALIGNMENT 0 YS2-9b18.p1k chr06 196 357 3579 3578 F 162 0.00 357 reject_low 34 ALIGNMENT 102 YS2-9b18.q1k chr05 179 296 571416 571533 F 118 95.76 379 reject_low 4 ALIGNMENT 0 YS2-9b18.p1k chr02 140 148 4670 4695 F 9 0.00 357 reject_low 12 ALIGNMENT 0 YS2-9b18.q1k chr15 62 179 1085736 1085735 F 118 0.00 379 reject_low 37 ALIGNMENT 0 YS2-9b18.p1k chr15 78 62 1085870 1085869 C 17 0.00 357 reject_low 36 ALIGNMENT 49 YS2-9b18.p1k chr13 79 139 4284 4344 F 61 95.08 357 reject_low 26 ALIGNMENT 0 YS2-9b18.p1k chr02 197 357 4743 4742 F 161 0.00 357 reject_low 12 ALIGNMENT 0 YS2-9b18.p1k chr08 62 78 4140 4139 F 17 0.00 357 reject_low 16 ALIGNMENT 0 YS2-9b18.p1k chr07 148 140 1085524 1085549 C 9 0.00 357 reject_low 14 ALIGNMENT 0 YS2-9b20.q1k vc_5 196 62 5064 5063 C 135 0.00 235 reject_low 5 ALIGNMENT 147 YS2-9b20.q1k chr08 38 195 72208 72365 F 158 99.37 235 accept_chi 0 ALIGNMENT 0 YS2-9b20.p1k chr08 205 187 72209 72208 C 19 0.00 205 accept_chi 1 ALIGNMENT 0 YS2-9b20.q1k chr08 196 235 72365 72364 F 40 0.00 235 accept_chi 0 ALIGNMENT 40 YS2-9b20.q1k vc_1 235 196 2472 2511 C 40 100.00 235 reject_low 2 ALIGNMENT 40 YS2-9b20.q1k vc_3 235 196 2472 2511 C 40 100.00 235 reject_low 3 ALIGNMENT 0 YS2-9b20.q1k vc_1 195 62 2512 2511 C 134 0.00 235 reject_low 2 ALIGNMENT 0 YS2-9b20.q1k vc_5 196 62 37 36 C 135 0.00 235 reject_low 7 ALIGNMENT 135 YS2-9b20.p1k chr08 186 29 72208 72364 C 158 96.84 205 accept_chi 1 ALIGNMENT 0 YS2-9b20.q1k vc_3 195 62 2512 2511 C 134 0.00 235 reject_low 3 ALIGNMENT 40 YS2-9b20.q1k vc_4 196 235 5832 5871 F 40 100.00 235 reject_low 4 ALIGNMENT 38 YS2-9b20.q1k vc_7 198 235 13525 13562 F 38 100.00 235 reject_low 6 ALIGNMENT 0 YS2-9b20.q1k vc_7 62 197 13525 13524 F 136 0.00 235 reject_low 6 ALIGNMENT 36 YS2-9b20.q1k vc_5 232 197 1 36 C 36 100.00 235 reject_low 7 ALIGNMENT 39 YS2-9b20.q1k vc_5 235 197 5025 5063 C 39 100.00 235 reject_low 5 ALIGNMENT 0 YS2-9b20.q1k vc_4 62 195 5832 5831 F 134 0.00 235 reject_low 4 ALIGNMENT 871 YS2-9b21.q1k chr02 994 31 272941 273894 C 964 98.24 1104 accept 0 ALIGNMENT 923 YS2-9b21.p1k chr02 21 1067 267717 268756 F 1047 97.13 1070 accept 0 ALIGNMENT 989 YS2-9b22.p1k chr12 1075 30 377282 378329 C 1046 98.95 1075 accept 0 ALIGNMENT 960 YS2-9b22.q1k chr12 48 1084 375841 376879 F 1037 98.36 1085 accept 0 ALIGNMENT 87 YS2-9b23.q1k chr12 865 1010 451419 451556 F 146 90.41 1094 reject_low 2 ALIGNMENT 720 YS2-9b23.q1k chr12 38 1010 459694 460693 F 973 93.32 1094 accept 0 ALIGNMENT 100 YS2-9b23.q1k chr12 38 137 472483 472582 F 100 100.00 1094 reject_low 5 ALIGNMENT 100 YS2-9b23.q1k chr12 38 137 482063 482162 F 100 100.00 1094 reject_low 6 ALIGNMENT 100 YS2-9b23.q1k chr12 38 137 468831 468930 F 100 100.00 1094 reject_low 4 ALIGNMENT 0 YS2-9b23.p1k chr12 737 492 451420 451419 C 246 0.00 1119 reject_low 1 ALIGNMENT 100 YS2-9b23.q1k chr12 38 137 485715 485814 F 100 100.00 1094 reject_low 7 ALIGNMENT 0 YS2-9b23.q1k chr12 138 760 468930 468929 F 623 0.00 1094 reject_low 4 ALIGNMENT 0 YS2-9b23.q1k chr12 153 760 489481 489480 F 608 0.00 1094 reject_low 3 ALIGNMENT 0 YS2-9b23.q1k chr12 138 760 485814 485813 F 623 0.00 1094 reject_low 7 ALIGNMENT 0 YS2-9b23.q1k chr12 138 760 482162 482161 F 623 0.00 1094 reject_low 6 ALIGNMENT 0 YS2-9b23.q1k chr12 138 760 472582 472581 F 623 0.00 1094 reject_low 5 ALIGNMENT 227 YS2-9b23.p1k chr12 491 179 451419 451744 C 313 93.29 1119 reject_low 1 ALIGNMENT 571 YS2-9b23.p1k chr12 1051 179 459982 460881 C 873 91.18 1119 accept 0 ALIGNMENT 109 YS2-9b23.q1k chr12 38 152 489367 489481 F 115 98.26 1094 reject_low 3 ALIGNMENT 0 YS2-9b23.q1k chr12 62 864 451419 451418 F 803 0.00 1094 reject_low 2 ALIGNMENT 36 YS2-9c01.q1k chrm 392 527 2667 2797 F 136 81.62 1363 reject_low 2 ALIGNMENT 37 YS2-9c01.q1k chrm 482 574 31040 31134 F 93 82.80 1363 reject_low 9 ALIGNMENT 0 YS2-9c01.q1k chrm 979 549 69028 69027 C 431 0.00 1363 reject_low 5 ALIGNMENT 0 YS2-9c01.q1k chrm 541 979 71272 71271 F 439 0.00 1363 reject_low 6 ALIGNMENT 0 YS2-9c01.q1k chrm 575 888 31135 35152 F 314 0.00 1363 reject_low 9 ALIGNMENT 0 YS2-9c01.q1k chrm 481 62 52814 52813 C 420 0.00 1363 reject_low 7 ALIGNMENT 47 YS2-9c01.q1k chrm 482 540 71214 71272 F 59 93.22 1363 reject_low 6 ALIGNMENT 0 YS2-9c01.q1k chrm 979 910 2546 2545 C 70 0.00 1363 reject_low 8 ALIGNMENT 723 YS2-9c01.q1k chrm 1209 38 62171 63356 C 1172 94.80 1363 accept_chi 0 ALIGNMENT 40 YS2-9c01.q1k chrm 533 482 52763 52813 C 52 94.23 1363 reject_low 7 ALIGNMENT 0 YS2-9c01.q1k chrm 62 481 71214 71213 F 420 0.00 1363 reject_low 6 ALIGNMENT 0 YS2-9c01.q1k chrm 914 979 35177 35176 F 66 0.00 1363 reject_low 9,10 ALIGNMENT 423 YS2-9c01.p1k chr05 93 875 60923 61700 F 783 86.21 1298 accept_chi 1 ALIGNMENT 0 YS2-9c01.q1k chrm 979 534 52764 52763 C 446 0.00 1363 reject_low 7 ALIGNMENT 22 YS2-9c01.q1k chrm 889 913 35153 35177 F 25 96.00 1363 reject_low 9,10 ALIGNMENT 48 YS2-9c01.q1k chrm 550 482 69420 69485 C 69 92.75 1363 reject_low 4 ALIGNMENT 0 YS2-9c01.q1k chrm 62 391 2667 2666 F 330 0.00 1363 reject_low 2 ALIGNMENT 0 YS2-9c01.q1k chrm 818 62 2614 2613 C 757 0.00 1363 reject_low 8 ALIGNMENT 0 YS2-9c01.q1k chrm 62 481 52332 52331 F 420 0.00 1363 reject_low 3 ALIGNMENT 0 YS2-9c01.q1k chrm 482 62 69095 69094 C 421 0.00 1363 reject_low 5 ALIGNMENT 0 YS2-9c01.q1k chrm 528 979 2797 2796 F 452 0.00 1363 reject_low 2 ALIGNMENT 0 YS2-9c01.q1k chrm 528 888 33494 35152 F 361 0.00 1363 reject_low 10 ALIGNMENT 0 YS2-9c01.q1k chrm 873 859 2579 2575 C 15 0.00 1363 reject_low 8 ALIGNMENT 0 YS2-9c01.q1k chrm 979 551 69421 69420 C 429 0.00 1363 reject_low 4 ALIGNMENT 49 YS2-9c01.q1k chrm 548 483 69027 69094 C 66 92.42 1363 reject_low 5 ALIGNMENT 47 YS2-9c01.q1k chrm 482 564 52332 52410 F 83 89.16 1363 reject_low 3 ALIGNMENT 20 YS2-9c01.q1k chrm 909 874 2545 2578 C 36 88.89 1363 reject_low 8 ALIGNMENT 0 YS2-9c01.q1k chrm 565 979 52410 52409 F 415 0.00 1363 reject_low 3 ALIGNMENT 0 YS2-9c01.q1k chrm 481 62 69486 69485 C 420 0.00 1363 reject_low 4 ALIGNMENT 0 YS2-9c01.q1k chrm 62 481 33449 33448 F 420 0.00 1363 reject_low 10 ALIGNMENT 24 YS2-9c01.q1k chrm 858 819 2576 2613 C 40 90.00 1363 reject_low 8 ALIGNMENT 35 YS2-9c01.q1k chrm 482 527 33449 33493 F 46 95.65 1363 reject_low 10 ALIGNMENT 0 YS2-9c01.q1k chrm 62 481 31040 31039 F 420 0.00 1363 reject_low 9 ALIGNMENT 165 YS2-9c02.p1k chr15 791 1109 1084616 1084954 F 319 86.21 1166 reject_low 32 ALIGNMENT 0 YS2-9c02.p1k chr04 62 745 1525400 1525399 F 684 0.00 1166 reject_low 30 ALIGNMENT 198 YS2-9c02.p1k chr09 1109 839 6667 6948 C 271 92.99 1166 reject_low 10 ALIGNMENT 0 YS2-9c02.p1k chr12 787 786 1065071 1071648 F 0 0.00 1166 reject_low 1 ALIGNMENT 0 YS2-9c02.p1k chr14 787 809 784065 784064 F 23 0.00 1166 reject_low 25 ALIGNMENT 0 YS2-9c02.p1k chr07 62 790 1084352 1084351 F 729 0.00 1166 reject_low 31 ALIGNMENT 686 YS2-9c02.q1k chr02 38 973 4923 5845 F 936 92.74 1205 reject_low 4 ALIGNMENT 774 YS2-9c02.q1k chr13 38 1110 4598 5681 F 1073 91.61 1205 accept_tel 0 ALIGNMENT 0 YS2-9c02.p1k chr03 791 809 316560 316559 F 19 0.00 1166 reject_low 19 ALIGNMENT 0 YS2-9c02.p1k chr15 809 791 55 54 C 19 0.00 1166 reject_low 24 ALIGNMENT 0 YS2-9c02.p1k chr10 838 544 6932 7224 C 295 0.00 1166 reject_low 11 ALIGNMENT 0 YS2-9c02.p1k chr12 62 753 1065113 1065112 F 692 0.00 1166 reject_low 27 ALIGNMENT 0 YS2-9c02.p1k chr04 809 791 108 107 C 19 0.00 1166 reject_low 20 ALIGNMENT 0 YS2-9c02.q1k chr05 801 864 6338 6337 F 64 0.00 1205 reject_low 17 ALIGNMENT 670 YS2-9c02.q1k chr12 1017 38 1065113 1066039 C 980 91.63 1205 reject_low 15 ALIGNMENT 198 YS2-9c02.p1k chr10 1109 839 6650 6931 C 271 92.99 1166 reject_low 11 ALIGNMENT 165 YS2-9c02.p1k chr16 1109 791 6187 6525 C 319 86.21 1166 reject_low 12 ALIGNMENT 739 YS2-9c02.q1k chr06 38 1019 3760 4730 F 982 92.97 1205 reject_low 13 ALIGNMENT 0 YS2-9c02.p1k chr03 809 791 323 322 C 19 0.00 1166 reject_low 23 ALIGNMENT 189 YS2-9c02.p1k chr12 1109 743 5322 5710 C 367 86.38 1166 reject_low 28 ALIGNMENT 22 YS2-9c02.q1k chr08 678 702 4972 4996 F 25 96.00 1205 reject_low 33 ALIGNMENT 506 YS2-9c02.p1k chr14 1109 26 6278 7406 C 1084 85.89 1166 reject_low 2 ALIGNMENT 0 YS2-9c02.p1k chr04 788 809 1525394 1525393 F 22 0.00 1166 reject_low 7 ALIGNMENT 187 YS2-9c02.p1k chr12 1109 746 10857 11237 C 364 86.54 1166 reject_low 29 ALIGNMENT 399 YS2-9c02.p1k chr14 39 786 783314 784065 F 748 88.77 1166 reject_low 25 ALIGNMENT 826 YS2-9c02.q1k chr14 38 1019 5672 6657 F 982 95.32 1205 reject_low 2 ALIGNMENT 0 YS2-9c02.q1k chr08 703 864 4996 4995 F 162 0.00 1205 reject_low 33 ALIGNMENT 410 YS2-9c02.q1k chr08 38 540 4454 4951 F 503 95.43 1205 reject_low 33 ALIGNMENT 487 YS2-9c02.p1k chr02 1109 39 5507 6572 C 1071 85.90 1166 reject_low 4 ALIGNMENT 0 YS2-9c02.p1k chr02 791 809 813168 813167 F 19 0.00 1166 reject_low 18 ALIGNMENT 616 YS2-9c02.q1k chr16 688 38 942804 943454 C 651 98.92 1205 reject_low 16 ALIGNMENT 0 YS2-9c02.p1k chr09 838 544 6949 7241 C 295 0.00 1166 reject_low 10 ALIGNMENT 55 YS2-9c02.q1k chr12 1120 983 1064929 1065066 C 138 83.33 1205 reject_low 21 ALIGNMENT 0 YS2-9c02.q1k chr08 541 677 4952 4971 F 137 0.00 1205 reject_low 33 ALIGNMENT 341 YS2-9c02.p1k chr11 34 605 665573 666140 F 572 89.69 1166 reject_low 35 ALIGNMENT 464 YS2-9c02.p1k chr02 34 790 812404 813168 F 757 91.02 1166 reject_low 18 ALIGNMENT 0 YS2-9c02.p1k chr06 742 596 4732 4935 C 147 0.00 1166 reject_low 13 ALIGNMENT 0 YS2-9c02.p1k chr11 791 809 666295 666294 F 19 0.00 1166 reject_low 35 ALIGNMENT 760 YS2-9c02.q1k chr12 38 1019 10257 11237 F 982 93.58 1205 reject_low 8 ALIGNMENT 408 YS2-9c02.p1k chr15 790 26 54 825 C 765 88.50 1166 reject_low 24 ALIGNMENT 0 YS2-9c02.q1k chr16 864 689 942805 942804 C 176 0.00 1205 reject_low 16 ALIGNMENT 401 YS2-9c02.p1k chr12 790 39 11313 12049 C 752 88.83 1166 reject_low 6,8 ALIGNMENT 0 YS2-9c02.p1k chr06 809 791 4779 4778 C 19 0.00 1166 reject_low 34 ALIGNMENT 0 YS2-9c02.p1k chr16 790 715 6526 6524 C 76 0.00 1166 reject_low 12 ALIGNMENT 448 YS2-9c02.p1k chr03 26 790 315801 316560 F 765 90.46 1166 reject_low 19 ALIGNMENT 418 YS2-9c02.p1k chr03 790 26 322 1076 C 765 89.41 1166 reject_low 23 ALIGNMENT 758 YS2-9c02.q1k chr15 975 38 1084614 1085555 C 938 94.56 1205 reject_low 9 ALIGNMENT 169 YS2-9c02.p1k chr12 782 1109 1071644 1071990 F 328 86.28 1166|5,0 reject_low 1 ALIGNMENT 420 YS2-9c02.p1k chr07 26 709 1083663 1084346 F 684 90.50 1166 reject_low 3 ALIGNMENT 0 YS2-9c02.p1k chr11 606 618 666141 666124 F 13 0.00 1166 reject_low 35 ALIGNMENT 856 YS2-9c02.q1k chr10 38 925 6044 6931 F 888 99.32 1205 reject_low 11 ALIGNMENT 765 YS2-9c02.q1k chr12 38 1019 4722 5707 F 982 93.58 1205 reject_low 6 ALIGNMENT 0 YS2-9c02.p1k chr05 732 809 570323 570322 F 78 0.00 1166 reject_low 5 ALIGNMENT 191 YS2-9c02.p1k chr06 1109 743 4345 4731 C 367 86.65 1166 reject_low 13 ALIGNMENT 0 YS2-9c02.p1k chr12 742 62 5711 5710 C 681 0.00 1166 reject_low 28 ALIGNMENT 0 YS2-9c02.p1k chr15 715 809 1084616 1084615 F 95 0.00 1166 reject_low 9 ALIGNMENT 0 YS2-9c02.p1k chr12 745 62 11238 11237 C 684 0.00 1166 reject_low 29 ALIGNMENT 697 YS2-9c02.q1k chr08 1012 38 556948 557908 C 975 91.90 1205 reject_low 14 ALIGNMENT 34 YS2-9c02.p1k chr06 790 653 4778 4916 C 138 84.78 1166 reject_low 34 ALIGNMENT 431 YS2-9c02.p1k chr07 786 36 2 748 C 751 90.15 1166 reject_low 22 ALIGNMENT 482 YS2-9c02.p1k chr12 26 790 1064300 1065074 F 765 91.50 1166|0,4 reject_low 1 ALIGNMENT 180 YS2-9c02.p1k chr04 746 1109 1525400 1525789 F 364 85.99 1166 reject_low 30 ALIGNMENT 56 YS2-9c02.p1k chr11 619 790 666125 666295 F 172 86.05 1166 reject_low 35 ALIGNMENT 334 YS2-9c02.p1k chr10 543 26 7225 7745 C 518 91.12 1166 reject_low 11 ALIGNMENT 0 YS2-9c02.p1k chr05 62 790 570325 570324 F 729 0.00 1166 reject_low 26 ALIGNMENT 815 YS2-9c02.q1k chr07 975 38 1084350 1085296 C 938 96.16 1205 reject_low 3 ALIGNMENT 0 YS2-9c02.p1k chr07 710 809 1084346 1084345 F 100 0.00 1166 reject_low 3 ALIGNMENT 513 YS2-9c02.q1k chr05 38 800 5627 6338 F 763 92.14 1205 reject_low 17 ALIGNMENT 856 YS2-9c02.q1k chr09 38 925 6061 6948 F 888 99.32 1205 reject_low 10 ALIGNMENT 236 YS2-9c02.p1k chr12 754 1109 1065113 1065484 F 356 91.01 1166 reject_low 27 ALIGNMENT 615 YS2-9c02.p1k chr13 1109 34 5198 6313 C 1076 88.85 1166 accept_tel 0 ALIGNMENT 390 YS2-9c02.p1k chr04 34 787 1524639 1525394 F 754 88.46 1166 reject_low 7 ALIGNMENT 239 YS2-9c02.p1k chr05 791 1109 570325 570654 F 319 93.42 1166 reject_low 26 ALIGNMENT 334 YS2-9c02.p1k chr09 543 26 7242 7762 C 518 91.12 1166 reject_low 10 ALIGNMENT 0 YS2-9c02.p1k chr15 62 790 1084616 1084615 F 729 0.00 1166 reject_low 32 ALIGNMENT 757 YS2-9c02.q1k chr12 973 38 1071652 1072591 C 936 94.66 1205 reject_low 1 ALIGNMENT 0 YS2-9c02.p1k chr12 809 791 11314 11313 C 19 0.00 1166 reject_low 6,8 ALIGNMENT 0 YS2-9c02.q1k chr12 982 62 1065067 1065066 C 921 0.00 1205 reject_low 21 ALIGNMENT 0 YS2-9c02.p1k chr07 809 787 3 2 C 23 0.00 1166 reject_low 22 ALIGNMENT 772 YS2-9c02.q1k chr04 1017 38 1525406 1526390 C 980 93.67 1205 reject_low 7 ALIGNMENT 322 YS2-9c02.p1k chr06 595 34 4936 5499 C 562 88.97 1166 reject_low 13 ALIGNMENT 380 YS2-9c02.p1k chr16 714 35 6525 7191 C 680 89.12 1166 reject_low 12 ALIGNMENT 815 YS2-9c02.q1k chr16 38 975 5581 6527 F 938 96.16 1205 reject_low 12 ALIGNMENT 377 YS2-9c02.p1k chr15 35 714 1083950 1084616 F 680 88.97 1166 reject_low 9 ALIGNMENT 448 YS2-9c02.p1k chr04 790 26 107 882 C 765 90.33 1166 reject_low 20 ALIGNMENT 0 YS2-9c02.p1k chr06 652 62 4917 4916 C 591 0.00 1166 reject_low 34 ALIGNMENT 445 YS2-9c02.p1k chr05 34 731 569625 570323 F 698 91.40 1166 reject_low 5 ALIGNMENT 792 YS2-9c02.q1k chr05 973 38 570325 571236 C 936 96.26 1205 reject_low 5 ALIGNMENT 165 YS2-9c02.p1k chr07 791 1109 1084352 1084690 F 319 86.21 1166 reject_low 31 ALIGNMENT 1027 YS2-9c04.p1k chr03 29 1193 152585 153753 F 1165 96.14 1193 accept 0 ALIGNMENT 974 YS2-9c04.q1k chr03 1173 38 155639 156780 C 1136 96.21 1183 accept 0 ALIGNMENT 142 YS2-9c06.p1k chr02 33 186 720571 720724 F 154 100.00 204 accept_chi 0 ALIGNMENT 41 YS2-9c06.q1k vc_3 234 194 2472 2512 C 41 100.00 234 reject_low 4 ALIGNMENT 137 YS2-9c06.q1k chr02 193 41 720571 720724 C 153 99.35 234 accept_chi 1 ALIGNMENT 41 YS2-9c06.q1k vc_4 194 234 5831 5871 F 41 100.00 234 reject_low 5 ALIGNMENT 0 YS2-9c06.q1k vc_7 62 196 63 62 F 135 0.00 234 reject_low 7 ALIGNMENT 0 YS2-9c06.q1k vc_3 193 62 2513 2512 C 132 0.00 234 reject_low 4 ALIGNMENT 41 YS2-9c06.q1k vc_2 234 194 2105 2145 C 41 100.00 234 reject_low 3 ALIGNMENT 38 YS2-9c06.q1k vc_7 197 234 13525 13562 F 38 100.00 234 reject_low 8 ALIGNMENT 0 YS2-9c06.q1k vc_4 62 193 5831 5830 F 132 0.00 234 reject_low 5 ALIGNMENT 36 YS2-9c06.q1k vc_5 231 196 1 36 C 36 100.00 234 reject_low 9 ALIGNMENT 0 YS2-9c06.q1k chr02 234 194 720572 720571 C 41 0.00 234 accept_chi 1 ALIGNMENT 0 YS2-9c06.q1k vc_1 193 62 2513 2512 C 132 0.00 234 reject_low 2 ALIGNMENT 0 YS2-9c06.q1k vc_5 195 62 5064 5063 C 134 0.00 234 reject_low 6 ALIGNMENT 0 YS2-9c06.q1k vc_7 62 196 13525 13524 F 135 0.00 234 reject_low 8 ALIGNMENT 0 YS2-9c06.q1k vc_5 195 62 37 36 C 134 0.00 234 reject_low 9 ALIGNMENT 0 YS2-9c06.p1k chr02 187 204 720724 720723 F 18 0.00 204 accept_chi 0 ALIGNMENT 39 YS2-9c06.q1k vc_5 234 196 5025 5063 C 39 100.00 234 reject_low 6 ALIGNMENT 38 YS2-9c06.q1k vc_7 197 234 63 100 F 38 100.00 234 reject_low 7 ALIGNMENT 0 YS2-9c06.q1k vc_2 193 62 2146 2145 C 132 0.00 234 reject_low 3 ALIGNMENT 41 YS2-9c06.q1k vc_1 234 194 2472 2512 C 41 100.00 234 reject_low 2 ALIGNMENT 486 YS2-9c07.p1k chr04 34 926 1409634 1410510 F 893 86.23 1233 accept 0 ALIGNMENT 0 YS2-9c08.q1k vc_1 356 62 2513 2512 C 295 0.00 397 reject_low 8 ALIGNMENT 39 YS2-9c08.q1k vc_5 397 359 5025 5063 C 39 100.00 397 reject_low 11 ALIGNMENT 318 YS2-9c08.p1k vc_7 1 478 13918 14400 F 478 89.54 498 reject_vc 7 ALIGNMENT 36 YS2-9c08.q1k vc_5 394 359 1 36 C 36 100.00 397 reject_low 13 ALIGNMENT 0 YS2-9c08.q1k vc_7 62 359 13525 13524 F 298 0.00 397 reject_low 12 ALIGNMENT 292 YS2-9c08.q1k chr05 48 356 145469 145777 F 309 99.68 397 accept 0 ALIGNMENT 324 YS2-9c08.p1k vc_2 478 1 1267 1749 C 478 89.96 498 reject_vc 2 ALIGNMENT 41 YS2-9c08.q1k vc_1 397 357 2472 2512 C 41 100.00 397 reject_low 8 ALIGNMENT 0 YS2-9c08.q1k vc_5 358 62 5064 5063 C 297 0.00 397 reject_low 11 ALIGNMENT 38 YS2-9c08.q1k vc_7 360 397 13525 13562 F 38 100.00 397 reject_low 12 ALIGNMENT 324 YS2-9c08.p1k vc_5 478 1 4187 4669 C 478 89.96 498 reject_vc 4 ALIGNMENT 41 YS2-9c08.q1k vc_3 397 357 2472 2512 C 41 100.00 397 reject_low 9 ALIGNMENT 0 YS2-9c08.q1k vc_5 358 62 37 36 C 297 0.00 397 reject_low 13 ALIGNMENT 0 YS2-9c08.q1k vc_3 356 62 2513 2512 C 295 0.00 397 reject_low 9 ALIGNMENT 318 YS2-9c08.p1k vc_7 1 478 456 938 F 478 89.54 498 reject_vc 6 ALIGNMENT 324 YS2-9c08.p1k vc_1 478 1 1267 1749 C 478 89.96 498 reject_vc 1 ALIGNMENT 324 YS2-9c08.p1k vc_3 478 1 1267 1749 C 478 89.96 498 reject_vc 3 ALIGNMENT 0 YS2-9c08.q1k chr05 357 397 145777 145776 F 41 0.00 397 accept 0 ALIGNMENT 41 YS2-9c08.q1k vc_4 357 397 5831 5871 F 41 100.00 397 reject_low 10 ALIGNMENT 324 YS2-9c08.p1k vc_6 1 478 3712 4194 F 478 89.96 498 reject_vc 5 ALIGNMENT 0 YS2-9c08.q1k vc_4 62 356 5831 5830 F 295 0.00 397 reject_low 10 ALIGNMENT 0 YS2-9c09.q1k vc_1 62 880 2531 2530 F 819 0.00 1330 reject_low 11 ALIGNMENT 21 YS2-9c09.p1k vc_2 827 847 2144 2164 F 21 100.00 1181 reject_low 29 ALIGNMENT 106 YS2-9c09.q1k chr10 833 594 381840 382079 C 240 81.67 1330 reject_low 36 ALIGNMENT 0 YS2-9c09.q1k chr05 592 62 95404 95403 C 531 0.00 1330 reject_low 37 ALIGNMENT 0 YS2-9c09.p1k vc_5 62 827 2379 2378 F 766 0.00 1181 reject_low 21 ALIGNMENT 0 YS2-9c09.p1k vc_4 826 62 5833 5832 C 765 0.00 1181 reject_low 15 ALIGNMENT 0 YS2-9c09.q1k vc_7 1040 62 6411 6410 C 979 0.00 1330 reject_low 23 ALIGNMENT 0 YS2-9c09.q1k chr14 150 62 253214 253213 C 89 0.00 1330 reject_low 16 ALIGNMENT 0 YS2-9c09.q1k chr12 841 902 97038 97037 F 62 0.00 1330 manual 2 ALIGNMENT 0 YS2-9c09.p1k vc_3 62 826 2511 2510 F 765 0.00 1181 reject_low 30 ALIGNMENT 0 YS2-9c09.p1k vc_3 846 62 2106 2105 C 785 0.00 1181 reject_low 10 ALIGNMENT 0 YS2-9c09.q1k vc_1 902 882 2473 2472 C 21 0.00 1330 reject_low 25 ALIGNMENT 0 YS2-9c09.q1k vc_5 902 882 5026 5025 C 21 0.00 1330 reject_low 21 ALIGNMENT 0 YS2-9c09.q1k chr05 740 707 95259 95289 C 34 0.00 1330 reject_low 37 ALIGNMENT 72 YS2-9c09.q1k vc_7 1225 1089 5032 5171 C 137 84.67 1330 reject_low 23 ALIGNMENT 0 YS2-9c09.p1k chr10 274 564 382080 382370 F 291 0.00 1181 reject_low 39 ALIGNMENT 0 YS2-9c09.q1k chr04 153 62 45217 45216 C 92 0.00 1330 reject_low 18 ALIGNMENT 226 YS2-9c09.q1k vc_3 881 1225 2531 2881 F 345 89.57 1330 reject_low 13 ALIGNMENT 65 YS2-9c09.q1k vc_4 968 881 1446 1534 C 88 94.32 1330 reject_low 24 ALIGNMENT 0 YS2-9c09.q1k chr10 163 93 382510 382574 C 71 0.00 1330 reject_low 36 ALIGNMENT 0 YS2-9c09.q1k vc_2 840 62 2146 2145 C 779 0.00 1330 reject_low 26 ALIGNMENT 0 YS2-9c09.p1k vc_1 62 826 2511 2510 F 765 0.00 1181 reject_low 28 ALIGNMENT 21 YS2-9c09.p1k vc_4 847 827 5812 5832 C 21 100.00 1181 reject_low 15 ALIGNMENT 0 YS2-9c09.q1k vc_4 880 62 1535 1534 C 819 0.00 1330 reject_low 24 ALIGNMENT 0 YS2-9c09.p1k vc_4 62 846 5871 5870 F 785 0.00 1181 reject_low 6 ALIGNMENT 0 YS2-9c09.q1k vc_7 1088 1085 5172 6365 C 4 0.00 1330 reject_low 23 ALIGNMENT 0 YS2-9c09.q1k vc_5 842 62 5064 5063 C 781 0.00 1330 reject_low 21 ALIGNMENT 0 YS2-9c09.p1k vc_7 62 846 100 99 F 785 0.00 1181 reject_vc 0 ALIGNMENT 0 YS2-9c09.p1k chr10 804 858 382603 382602 F 55 0.00 1181 reject_low 39 ALIGNMENT 20 YS2-9c09.p1k vc_5 828 847 2379 2398 F 20 100.00 1181 reject_low 21 ALIGNMENT 0 YS2-9c09.q1k vc_5 842 62 37 36 C 781 0.00 1330 reject_low 32 ALIGNMENT 226 YS2-9c09.q1k vc_2 881 1225 2164 2514 F 345 89.57 1330 reject_low 12 ALIGNMENT 0 YS2-9c09.q1k vc_2 902 882 2106 2105 C 21 0.00 1330 reject_low 26 ALIGNMENT 783 YS2-9c09.q1k chr12 40 840 96237 97038 F 801 99.50 1330 manual 2 ALIGNMENT 250 YS2-9c09.p1k vc_1 1174 847 1771 2105 C 328 93.29 1181 reject_low 8 ALIGNMENT 22 YS2-9c09.p1k chr10 775 803 382575 382603 F 29 93.10 1181 reject_low 39 ALIGNMENT 221 YS2-9c09.q1k vc_4 1225 881 5460 5812 C 345 89.28 1330 reject_low 14 ALIGNMENT 203 YS2-9c09.q1k chr04 835 154 44529 45216 C 682 77.42 1330 reject_low 18 ALIGNMENT 0 YS2-9c09.q1k chr10 62 147 520294 520293 F 86 0.00 1330 reject_low 35 ALIGNMENT 0 YS2-9c09.q1k vc_3 840 62 2513 2512 C 779 0.00 1330 reject_low 27 ALIGNMENT 780 YS2-9c09.q1k chr01 40 840 140186 140987 F 801 99.38 1330 manual 3 ALIGNMENT 0 YS2-9c09.q1k vc_5 62 880 2398 2397 F 819 0.00 1330 reject_vc 1 ALIGNMENT 0 YS2-9c09.p1k chr10 704 774 382510 382574 F 71 0.00 1181 reject_low 39 ALIGNMENT 778 YS2-9c09.p1k chr12 828 29 96237 97038 C 800 99.38 1181 reject_low 4 ALIGNMENT 118 YS2-9c09.q1k vc_4 881 1037 126 284 F 157 93.63 1330 reject_low 15 ALIGNMENT 250 YS2-9c09.p1k vc_5 1174 847 4691 5025 C 328 93.29 1181 reject_vc 1 ALIGNMENT 41 YS2-9c09.q1k vc_1 881 841 2472 2512 C 41 100.00 1330 reject_low 25 ALIGNMENT 226 YS2-9c09.q1k vc_5 881 1225 2398 2748 F 345 89.57 1330 reject_vc 1 ALIGNMENT 0 YS2-9c09.p1k chr01 858 829 140187 140186 C 30 0.00 1181 reject_low 5 ALIGNMENT 0 YS2-9c09.p1k chr05 275 858 95403 95402 F 584 0.00 1181 reject_low 38 ALIGNMENT 0 YS2-9c09.p1k chr04 714 858 45216 45215 F 145 0.00 1181 reject_low 19 ALIGNMENT 0 YS2-9c09.q1k chr05 902 834 95167 95166 C 69 0.00 1330 reject_low 37 ALIGNMENT 0 YS2-9c09.p1k chr10 160 132 520862 520887 C 29 0.00 1181 reject_low 40 ALIGNMENT 0 YS2-9c09.p1k vc_2 62 826 2144 2143 F 765 0.00 1181 reject_low 29 ALIGNMENT 226 YS2-9c09.q1k vc_1 881 1225 2531 2881 F 345 89.57 1330 reject_low 11 ALIGNMENT 0 YS2-9c09.p1k chr10 858 132 520889 520888 C 727 0.00 1181 reject_low 35 ALIGNMENT 0 YS2-9c09.q1k chr10 841 902 520992 520991 F 62 0.00 1330 reject_low 35 ALIGNMENT 46 YS2-9c09.p1k chr10 565 703 382371 382509 F 139 78.42 1181 reject_low 39 ALIGNMENT 0 YS2-9c09.q1k vc_5 902 879 2 1 C 24 0.00 1330 reject_low 32 ALIGNMENT 0 YS2-9c09.p1k vc_3 846 62 2473 2472 C 785 0.00 1181 reject_low 34 ALIGNMENT 54 YS2-9c09.q1k chr05 706 593 95290 95403 C 114 83.33 1330 reject_low 37 ALIGNMENT 0 YS2-9c09.q1k chr14 902 841 252519 252518 C 62 0.00 1330 reject_low 16 ALIGNMENT 21 YS2-9c09.p1k vc_3 827 847 2511 2531 F 21 100.00 1181 reject_low 30 ALIGNMENT 0 YS2-9c09.p1k chr10 858 828 520199 520198 C 31 0.00 1181 reject_low 40 ALIGNMENT 21 YS2-9c09.p1k vc_1 827 847 2511 2531 F 21 100.00 1181 reject_low 28 ALIGNMENT 36 YS2-9c09.q1k vc_5 878 843 1 36 C 36 100.00 1330 reject_low 32 ALIGNMENT 0 YS2-9c09.q1k vc_4 882 881 5872 6353 F 0 0.00 1330 reject_low 20 ALIGNMENT 194 YS2-9c09.p1k chr04 37 713 44533 45216 F 677 77.10 1181 reject_low 19 ALIGNMENT 41 YS2-9c09.q1k vc_2 881 841 2105 2145 C 41 100.00 1330 reject_low 26 ALIGNMENT 22 YS2-9c09.q1k chr10 92 64 382575 382603 C 29 93.10 1330 reject_low 36 ALIGNMENT 0 YS2-9c09.q1k chr04 902 836 44530 44529 C 67 0.00 1330 reject_low 18 ALIGNMENT 31 YS2-9c09.p1k chr10 131 64 520888 520955 C 68 82.35 1181 reject_low 35,40 ALIGNMENT 250 YS2-9c09.p1k vc_3 1174 847 1771 2105 C 328 93.29 1181 reject_low 10 ALIGNMENT 250 YS2-9c09.p1k vc_2 1174 847 1771 2105 C 328 93.29 1181 reject_low 9 ALIGNMENT 0 YS2-9c09.q1k vc_7 882 902 100 99 F 21 0.00 1330 reject_low 22 ALIGNMENT 38 YS2-9c09.q1k vc_7 844 881 63 100 F 38 100.00 1330 reject_low 22 ALIGNMENT 208 YS2-9c09.q1k chr14 840 151 252518 253213 C 690 77.54 1330 reject_low 16 ALIGNMENT 24 YS2-9c09.q1k chr05 833 741 95166 95258 C 93 75.27 1330 reject_low 37 ALIGNMENT 0 YS2-9c09.q1k chr10 209 592 520355 520747 F 384 0.00 1330 reject_low 35 ALIGNMENT 20 YS2-9c09.p1k chr10 827 775 520198 520250 C 53 79.25 1181 reject_low 40 ALIGNMENT 0 YS2-9c09.q1k vc_7 62 843 13525 13524 F 782 0.00 1330 reject_low 31 ALIGNMENT 0 YS2-9c09.p1k vc_7 826 62 2748 2747 C 765 0.00 1181 reject_low 22 ALIGNMENT 21 YS2-9c09.p1k chr05 76 126 95208 95258 F 51 80.39 1181 reject_low 38 ALIGNMENT 0 YS2-9c09.p1k chr05 127 160 95259 95289 F 34 0.00 1181 reject_low 38 ALIGNMENT 38 YS2-9c09.q1k vc_7 1084 1041 6366 6410 C 44 97.73 1330 reject_low 23 ALIGNMENT 0 YS2-9c09.q1k vc_3 902 882 2473 2472 C 21 0.00 1330 reject_low 27 ALIGNMENT 251 YS2-9c09.p1k vc_4 847 1174 5871 6205 F 328 92.99 1181 reject_low 6 ALIGNMENT 0 YS2-9c09.p1k chr10 774 720 520251 520293 C 55 0.00 1181 reject_low 40 ALIGNMENT 0 YS2-9c09.p1k vc_5 846 62 5026 5025 C 785 0.00 1181 reject_vc 1 ALIGNMENT 21 YS2-9c09.p1k vc_7 847 827 2727 2747 C 21 100.00 1181 reject_low 22 ALIGNMENT 0 YS2-9c09.p1k vc_7 62 846 13562 13561 F 785 0.00 1181 reject_low 7 ALIGNMENT 0 YS2-9c09.p1k chr12 858 829 96238 96237 C 30 0.00 1181 reject_low 4 ALIGNMENT 200 YS2-9c09.p1k chr14 37 716 252527 253213 F 680 77.35 1181 reject_low 17 ALIGNMENT 0 YS2-9c09.p1k vc_1 846 62 2106 2105 C 785 0.00 1181 reject_low 8 ALIGNMENT 26 YS2-9c09.p1k vc_1 877 847 2441 2472 C 31 96.77 1181 reject_low 33 ALIGNMENT 31 YS2-9c09.p1k chr10 719 659 520294 520354 C 61 83.61 1181 reject_low 40 ALIGNMENT 226 YS2-9c09.q1k vc_7 1225 881 2377 2727 C 345 89.57 1330 reject_vc 0 ALIGNMENT 41 YS2-9c09.q1k vc_3 881 841 2472 2512 C 41 100.00 1330 reject_low 27 ALIGNMENT 39 YS2-9c09.q1k vc_5 881 843 5025 5063 C 39 100.00 1330 reject_low 21 ALIGNMENT 0 YS2-9c09.q1k vc_1 840 62 2513 2512 C 779 0.00 1330 reject_low 25 ALIGNMENT 54 YS2-9c09.p1k chr05 161 274 95290 95403 F 114 83.33 1181 reject_low 38 ALIGNMENT 0 YS2-9c09.p1k chr14 717 858 253213 253212 F 142 0.00 1181 reject_low 17 ALIGNMENT 0 YS2-9c09.q1k chr10 593 303 382080 382370 C 291 0.00 1330 reject_low 36 ALIGNMENT 251 YS2-9c09.p1k vc_7 847 1174 13562 13896 F 328 92.99 1181 reject_low 7 ALIGNMENT 0 YS2-9c09.q1k vc_7 880 62 2728 2727 C 819 0.00 1330 reject_vc 0 ALIGNMENT 0 YS2-9c09.p1k chr10 658 275 520355 520747 C 384 0.00 1181 reject_low 40 ALIGNMENT 0 YS2-9c09.p1k vc_2 846 62 2106 2105 C 785 0.00 1181 reject_low 9 ALIGNMENT 38 YS2-9c09.q1k vc_7 844 881 13525 13562 F 38 100.00 1330 reject_low 31 ALIGNMENT 26 YS2-9c09.p1k vc_3 877 847 2441 2472 C 31 96.77 1181 reject_low 34 ALIGNMENT 0 YS2-9c09.q1k vc_7 882 902 13562 13561 F 21 0.00 1330 reject_low 31 ALIGNMENT 0 YS2-9c09.q1k vc_4 62 840 5831 5830 F 779 0.00 1330 reject_low 20 ALIGNMENT 60 YS2-9c09.q1k chr10 593 840 520748 520992 F 248 75.81 1330 reject_low 35 ALIGNMENT 51 YS2-9c09.p1k chr10 274 161 520748 520861 C 114 82.46 1181 reject_low 40 ALIGNMENT 0 YS2-9c09.q1k chr01 841 902 140987 140986 F 62 0.00 1330 manual 3 ALIGNMENT 0 YS2-9c09.q1k vc_2 62 880 2164 2163 F 819 0.00 1330 reject_low 12 ALIGNMENT 41 YS2-9c09.q1k vc_4 841 881 5831 5871 F 41 100.00 1330 reject_low 20 ALIGNMENT 31 YS2-9c09.q1k chr10 148 208 520294 520354 F 61 83.61 1330 reject_low 35 ALIGNMENT 775 YS2-9c09.p1k chr01 828 29 140186 140987 C 800 99.25 1181 reject_low 5 ALIGNMENT 118 YS2-9c09.q1k vc_4 881 1037 6353 6511 F 157 93.63 1330|1,0 reject_low 20 ALIGNMENT 0 YS2-9c09.q1k chr10 902 834 381841 381840 C 69 0.00 1330 reject_low 36 ALIGNMENT 46 YS2-9c09.q1k chr10 302 164 382371 382509 C 139 78.42 1330 reject_low 36 ALIGNMENT 0 YS2-9c09.q1k vc_4 62 880 126 125 F 819 0.00 1330 reject_low 15 ALIGNMENT 99 YS2-9c09.p1k chr10 37 273 381842 382079 F 237 81.01 1181 reject_low 39 ALIGNMENT 0 YS2-9c09.p1k vc_1 846 62 2473 2472 C 785 0.00 1181 reject_low 33 ALIGNMENT 0 YS2-9c09.q1k vc_4 880 62 5813 5812 C 819 0.00 1330 reject_low 14 ALIGNMENT 0 YS2-9c09.q1k vc_3 62 880 2531 2530 F 819 0.00 1330 reject_low 13 ALIGNMENT 251 YS2-9c09.p1k vc_7 847 1174 100 434 F 328 92.99 1181 reject_vc 0 ALIGNMENT 0 YS2-9c09.q1k vc_7 62 843 63 62 F 782 0.00 1330 reject_low 22 ALIGNMENT 38 YS2-9c10.q1k vc_7 182 219 13525 13562 F 38 100.00 219 reject_low 5 ALIGNMENT 40 YS2-9c10.q1k vc_1 219 180 2472 2511 C 40 100.00 219 reject_low 1 ALIGNMENT 0 YS2-9c10.q1k vc_5 180 62 5064 5063 C 119 0.00 219 reject_low 4 ALIGNMENT 0 YS2-9c10.q1k vc_1 179 62 2512 2511 C 118 0.00 219 reject_low 1 ALIGNMENT 0 YS2-9c10.q1k chr05 180 219 372953 372952 F 40 0.00 219 accept 0 ALIGNMENT 0 YS2-9c10.q1k vc_5 180 62 37 36 C 119 0.00 219 reject_low 6 ALIGNMENT 0 YS2-9c10.q1k vc_3 179 62 2512 2511 C 118 0.00 219 reject_low 2 ALIGNMENT 0 YS2-9c10.q1k vc_7 62 181 13525 13524 F 120 0.00 219 reject_low 5 ALIGNMENT 36 YS2-9c10.q1k vc_5 216 181 1 36 C 36 100.00 219 reject_low 6 ALIGNMENT 40 YS2-9c10.q1k vc_3 219 180 2472 2511 C 40 100.00 219 reject_low 2 ALIGNMENT 39 YS2-9c10.q1k vc_5 219 181 5025 5063 C 39 100.00 219 reject_low 4 ALIGNMENT 40 YS2-9c10.q1k vc_4 180 219 5832 5871 F 40 100.00 219 reject_low 3 ALIGNMENT 0 YS2-9c10.q1k vc_4 62 179 5832 5831 F 118 0.00 219 reject_low 3 ALIGNMENT 127 YS2-9c10.q1k chr05 31 179 372804 372953 F 149 97.99 219 accept 0 ALIGNMENT 39 YS2-9c11.q1k vc_5 391 353 5025 5063 C 39 100.00 391 reject_low 6 ALIGNMENT 0 YS2-9c11.q1k vc_2 350 62 2146 2145 C 289 0.00 391 reject_low 3 ALIGNMENT 41 YS2-9c11.q1k vc_2 391 351 2105 2145 C 41 100.00 391 reject_low 3 ALIGNMENT 272 YS2-9c11.q1k chrm 350 42 46708 47018 C 309 99.35 391 accept_chi 1 ALIGNMENT 0 YS2-9c11.q1k vc_1 350 62 2513 2512 C 289 0.00 391 reject_low 2 ALIGNMENT 0 YS2-9c11.q1k vc_5 352 62 5064 5063 C 291 0.00 391 reject_low 6 ALIGNMENT 0 YS2-9c11.q1k vc_4 62 350 5831 5830 F 289 0.00 391 reject_low 5 ALIGNMENT 272 YS2-9c11.p1k chrm 40 348 46708 47018 F 309 99.35 366 accept_chi 0 ALIGNMENT 0 YS2-9c11.q1k chrm 391 351 46709 46708 C 41 0.00 391 accept_chi 1 ALIGNMENT 0 YS2-9c11.p1k chrm 349 366 47018 47017 F 18 0.00 366 accept_chi 0 ALIGNMENT 0 YS2-9c11.q1k vc_3 350 62 2513 2512 C 289 0.00 391 reject_low 4 ALIGNMENT 41 YS2-9c11.q1k vc_4 351 391 5831 5871 F 41 100.00 391 reject_low 5 ALIGNMENT 41 YS2-9c11.q1k vc_3 391 351 2472 2512 C 41 100.00 391 reject_low 4 ALIGNMENT 36 YS2-9c11.q1k vc_5 388 353 1 36 C 36 100.00 391 reject_low 8 ALIGNMENT 0 YS2-9c11.q1k vc_5 352 62 37 36 C 291 0.00 391 reject_low 8 ALIGNMENT 38 YS2-9c11.q1k vc_7 354 391 13525 13562 F 38 100.00 391 reject_low 7 ALIGNMENT 41 YS2-9c11.q1k vc_1 391 351 2472 2512 C 41 100.00 391 reject_low 2 ALIGNMENT 0 YS2-9c11.q1k vc_7 62 353 13525 13524 F 292 0.00 391 reject_low 7 ALIGNMENT 950 YS2-9c13.q1k chr14 39 1180 66477 67613 F 1142 95.62 1371 accept 0 ALIGNMENT 926 YS2-9c13.p1k chr14 1103 32 70879 71956 C 1072 96.46 1150 accept 0 ALIGNMENT 691 YS2-9c14.q1k chr12 52 1066 458424 459385 F 1015 93.00 1169 accept 0 ALIGNMENT 0 YS2-9c14.q1k vc_2 1064 62 2148 2147 C 1003 0.00 1169 reject_low 4 ALIGNMENT 672 YS2-9c14.p1k chr12 1049 31 458422 459385 C 1019 92.44 1164 reject_low 2 ALIGNMENT 691 YS2-9c14.q1k chr12 52 1066 467561 468522 F 1015 93.00 1169 reject_low 1 ALIGNMENT 0 YS2-9c14.p1k chr06 107 799 31729 31728 F 693 0.00 1164 reject_low 5 ALIGNMENT 45 YS2-9c14.q1k vc_2 1107 1167 2164 2222 F 61 93.44 1169 reject_low 3 ALIGNMENT 0 YS2-9c14.q1k vc_2 62 1106 2164 2163 F 1045 0.00 1169 reject_low 3 ALIGNMENT 49 YS2-9c14.q1k chr06 1066 989 31652 31729 C 78 89.74 1169 reject_low 6 ALIGNMENT 34 YS2-9c14.q1k vc_2 1107 1065 2105 2147 C 43 93.02 1169 reject_low 4 ALIGNMENT 672 YS2-9c14.p1k chr12 1049 31 467559 468522 C 1019 92.44 1164 accept 0 ALIGNMENT 0 YS2-9c14.q1k chr06 988 62 31730 31729 C 927 0.00 1169 reject_low 6 ALIGNMENT 56 YS2-9c14.p1k chr06 31 106 31652 31729 F 76 94.74 1164 reject_low 5 ALIGNMENT 985 YS2-9c15.q1k chr16 30 1104 644303 645384 F 1075 97.40 1259 accept 0 ALIGNMENT 961 YS2-9c15.p1k chr16 1141 32 648082 649188 C 1110 96.67 1143 accept 0 ALIGNMENT 42 YS2-9c16.q1k vc_3 543 502 2472 2513 C 42 100.00 543 reject_low 4 ALIGNMENT 42 YS2-9c16.q1k vc_1 543 502 2472 2513 C 42 100.00 543 reject_low 2 ALIGNMENT 0 YS2-9c16.q1k vc_5 504 62 5064 5063 C 443 0.00 543 reject_low 6 ALIGNMENT 38 YS2-9c16.q1k vc_7 506 543 13525 13562 F 38 100.00 543 reject_low 7 ALIGNMENT 0 YS2-9c16.q1k vc_1 501 62 2514 2513 C 440 0.00 543 reject_low 2 ALIGNMENT 0 YS2-9c16.q1k vc_4 62 501 5830 5829 F 440 0.00 543 reject_low 5 ALIGNMENT 0 YS2-9c16.q1k vc_7 62 505 13525 13524 F 444 0.00 543 reject_low 7 ALIGNMENT 0 YS2-9c16.p1k chr10 489 506 216230 216229 F 18 0.00 506 accept_chi 1 ALIGNMENT 0 YS2-9c16.q1k chr10 543 503 215768 215767 C 41 0.00 543 accept_chi 0 ALIGNMENT 423 YS2-9c16.p1k chr10 28 488 215769 216230 F 461 98.70 506 accept_chi 1 ALIGNMENT 39 YS2-9c16.q1k vc_5 543 505 5025 5063 C 39 100.00 543 reject_low 6 ALIGNMENT 0 YS2-9c16.q1k vc_5 504 62 37 36 C 443 0.00 543 reject_low 8 ALIGNMENT 0 YS2-9c16.q1k vc_3 501 62 2514 2513 C 440 0.00 543 reject_low 4 ALIGNMENT 42 YS2-9c16.q1k vc_4 502 543 5830 5871 F 42 100.00 543 reject_low 5 ALIGNMENT 0 YS2-9c16.q1k vc_2 501 62 2147 2146 C 440 0.00 543 reject_low 3 ALIGNMENT 426 YS2-9c16.q1k chr10 502 38 215767 216230 C 465 98.71 543 accept_chi 0 ALIGNMENT 36 YS2-9c16.q1k vc_5 540 505 1 36 C 36 100.00 543 reject_low 8 ALIGNMENT 42 YS2-9c16.q1k vc_2 543 502 2105 2146 C 42 100.00 543 reject_low 3 ALIGNMENT 24 YS2-9c17.p1k chr12 840 811 9442 9471 C 30 93.33 1135 reject_low 15 ALIGNMENT 0 YS2-9c17.p1k chr02 914 841 4089 4107 C 74 0.00 1135 reject_low 17 ALIGNMENT 0 YS2-9c17.q1k chr02 62 157 2 1 F 96 0.00 1242 reject_low 17 ALIGNMENT 0 YS2-9c17.q1k chr06 62 745 2 1 F 684 0.00 1242 reject_low 18 ALIGNMENT 0 YS2-9c17.p1k chr08 749 810 558678 558693 F 62 0.00 1135 reject_low 11 ALIGNMENT 900 YS2-9c17.q1k chr10 68 1220 100 1264 F 1153 94.19 1242 ambiguous_tel 1 ALIGNMENT 830 YS2-9c17.q1k chr05 174 1220 2 1065 F 1047 94.65 1242 reject_low 10 ALIGNMENT 405 YS2-9c17.p1k chr05 1042 575 4091 4558 C 468 95.94 1135 reject_low 10 ALIGNMENT 944 YS2-9c17.p1k chr16 1131 33 3822 4925 C 1099 95.91 1135 reject_low 7 ALIGNMENT 944 YS2-9c17.p1k chr07 33 1131 1085952 1087055 F 1099 95.91 1135 ambiguous_tel 5 ALIGNMENT 0 YS2-9c17.p1k chr06 914 841 2925 2943 C 74 0.00 1135 reject_low 18 ALIGNMENT 50 YS2-9c17.p1k chr06 970 915 2869 2924 C 56 96.43 1135 reject_low 18 ALIGNMENT 50 YS2-9c17.p1k chr12 970 915 3832 3887 C 56 96.43 1135 reject_low 16 ALIGNMENT 0 YS2-9c17.p1k chr12 810 749 9472 9487 C 62 0.00 1135 reject_low 15 ALIGNMENT 38 YS2-9c17.p1k chr12 89 33 4011 4066 C 57 91.23 1135 reject_low 16 ALIGNMENT 0 YS2-9c17.p1k chr08 914 841 3620 3638 C 74 0.00 1135 reject_low 13 ALIGNMENT 38 YS2-9c17.p1k chr02 89 33 4212 4267 C 57 91.23 1135 reject_low 17 ALIGNMENT 38 YS2-9c17.p1k chr16 33 89 944111 944166 F 57 91.23 1135 reject_low 12 ALIGNMENT 0 YS2-9c17.p1k chr06 691 72 3047 3064 C 620 0.00 1135 reject_low 18 ALIGNMENT 0 YS2-9c17.p1k chr12 691 90 4010 4010 C 602 0.00 1135 reject_low 16 ALIGNMENT 842 YS2-9c17.q1k chr16 158 1220 2 1078 F 1063 94.73 1242 reject_low 7 ALIGNMENT 53 YS2-9c17.p1k chr16 692 748 944168 944224 F 57 98.25 1135 reject_low 12 ALIGNMENT 898 YS2-9c17.q1k chr14 73 1220 4 1169 F 1148 94.43 1242 ambiguous_tel 3 ALIGNMENT 0 YS2-9c17.p1k chr05 574 560 4559 4554 C 15 0.00 1135 reject_low 10 ALIGNMENT 325 YS2-9c17.q1k chr06 746 1220 2 488 F 475 91.16 1242 reject_low 18 ALIGNMENT 0 YS2-9c17.q1k chr12 156 62 1078175 1078174 C 95 0.00 1242 ambiguous_tel 6 ALIGNMENT 29 YS2-9c17.p1k chr05 559 525 4555 4589 C 35 94.29 1135 reject_low 10 ALIGNMENT 36 YS2-9c17.p1k chr06 71 33 3065 3103 C 39 100.00 1135 reject_low 18 ALIGNMENT 29 YS2-9c17.p1k chr12 525 559 1067094 1067128 F 35 94.29 1135 reject_low 9 ALIGNMENT 53 YS2-9c17.p1k chr02 748 692 4154 4210 C 57 98.25 1135 reject_low 17 ALIGNMENT 0 YS2-9c17.p1k chr05 1046 1043 4067 4090 C 4 0.00 1135 reject_low 10 ALIGNMENT 859 YS2-9c17.q1k chr12 1220 157 1077094 1078174 C 1064 95.11 1242 ambiguous_tel 6 ALIGNMENT 900 YS2-9c17.q1k chr09 68 1220 117 1281 F 1153 94.19 1242 ambiguous_tel 0 ALIGNMENT 885 YS2-9c17.q1k chr12 68 1220 113 1278 F 1153 94.10 1242 reject_low 16 ALIGNMENT 53 YS2-9c17.p1k chr12 748 692 3953 4009 C 57 98.25 1135 reject_low 16 ALIGNMENT 918 YS2-9c17.q1k chr12 1220 68 1070431 1071604 C 1153 94.80 1242 reject_low 9 ALIGNMENT 0 YS2-9c17.p1k chr13 691 90 3886 3886 C 602 0.00 1135 reject_low 14 ALIGNMENT 0 YS2-9c17.p1k chr08 691 90 3742 3742 C 602 0.00 1135 reject_low 13 ALIGNMENT 918 YS2-9c17.q1k chr15 1220 68 1090058 1091231 C 1153 94.80 1242 ambiguous_tel 2 ALIGNMENT 38 YS2-9c17.p1k chr08 33 89 558564 558619 F 57 91.23 1135 reject_low 11 ALIGNMENT 0 YS2-9c17.p1k chr08 841 914 558724 558742 F 74 0.00 1135 reject_low 11 ALIGNMENT 24 YS2-9c17.p1k chr13 840 811 3783 3812 C 30 93.33 1135 reject_low 14 ALIGNMENT 38 YS2-9c17.p1k chr13 89 33 3887 3942 C 57 91.23 1135 reject_low 14 ALIGNMENT 0 YS2-9c17.q1k chr07 89 62 1090944 1090943 C 28 0.00 1242 ambiguous_tel 5 ALIGNMENT 912 YS2-9c17.q1k chr08 68 1220 72 1246 F 1153 94.62 1242 reject_low 13 ALIGNMENT 0 YS2-9c17.p1k chr08 90 691 558620 558620 F 602 0.00 1135 reject_low 11 ALIGNMENT 944 YS2-9c17.p1k chr14 1131 33 3913 5016 C 1099 95.91 1135 ambiguous_tel 3 ALIGNMENT 0 YS2-9c17.p1k chr02 810 749 4138 4153 C 62 0.00 1135 reject_low 17 ALIGNMENT 24 YS2-9c17.p1k chr16 811 840 944241 944270 F 30 93.33 1135 reject_low 12 ALIGNMENT 0 YS2-9c17.q1k chr04 215 62 1531915 1531914 C 154 0.00 1242 reject_low 8 ALIGNMENT 53 YS2-9c17.p1k chr12 748 692 9488 9544 C 57 98.25 1135 reject_low 15 ALIGNMENT 955 YS2-9c17.p1k chr10 1131 33 4284 5388 C 1099 96.27 1135 ambiguous_tel 1 ALIGNMENT 53 YS2-9c17.p1k chr08 692 748 558621 558677 F 57 98.25 1135 reject_low 11 ALIGNMENT 0 YS2-9c17.q1k chr05 89 62 576867 576866 C 28 0.00 1242 ambiguous_tel 4 ALIGNMENT 0 YS2-9c17.p1k chr12 810 749 3937 3952 C 62 0.00 1135 reject_low 16 ALIGNMENT 53 YS2-9c17.p1k chr06 748 692 2990 3046 C 57 98.25 1135 reject_low 18 ALIGNMENT 419 YS2-9c17.p1k chr12 33 468 1066663 1067097 F 436 99.08 1135 reject_low 9 ALIGNMENT 50 YS2-9c17.p1k chr12 970 915 9367 9422 C 56 96.43 1135 reject_low 15 ALIGNMENT 0 YS2-9c17.p1k chr12 914 841 9423 9441 C 74 0.00 1135 reject_low 15 ALIGNMENT 0 YS2-9c17.p1k chr12 691 90 9545 9545 C 602 0.00 1135 reject_low 15 ALIGNMENT 40 YS2-9c17.p1k chr05 1131 1047 3977 4066 C 85 84.71 1135 reject_low 10 ALIGNMENT 0 YS2-9c17.p1k chr13 914 841 3764 3782 C 74 0.00 1135 reject_low 14 ALIGNMENT 0 YS2-9c17.p1k chr16 90 691 944167 944167 F 602 0.00 1135 reject_low 12 ALIGNMENT 0 YS2-9c17.p1k chr16 841 914 944271 944289 F 74 0.00 1135 reject_low 12 ALIGNMENT 901 YS2-9c17.q1k chr16 1220 75 946899 948062 C 1146 94.59 1242 reject_low 12 ALIGNMENT 944 YS2-9c17.p1k chr12 33 1131 1073247 1074350 F 1099 95.91 1135 ambiguous_tel 6 ALIGNMENT 0 YS2-9c17.p1k chr12 469 524 1067098 1067093 F 56 0.00 1135 reject_low 9 ALIGNMENT 50 YS2-9c17.p1k chr02 970 915 4033 4088 C 56 96.43 1135 reject_low 17 ALIGNMENT 944 YS2-9c17.p1k chr15 33 1131 1086211 1087314 F 1099 95.91 1135 ambiguous_tel 2 ALIGNMENT 47 YS2-9c17.p1k chr13 970 915 3708 3763 C 56 94.64 1135 reject_low 14 ALIGNMENT 38 YS2-9c17.p1k chr12 89 33 9546 9601 C 57 91.23 1135 reject_low 15 ALIGNMENT 944 YS2-9c17.p1k chr04 33 1131 1527046 1528149 F 1099 95.91 1135 reject_low 8 ALIGNMENT 0 YS2-9c17.p1k chr12 560 574 1067129 1067124 F 15 0.00 1135 reject_low 9 ALIGNMENT 0 YS2-9c17.p1k chr13 810 749 3813 3828 C 62 0.00 1135 reject_low 14 ALIGNMENT 0 YS2-9c17.p1k chr05 524 469 4590 4585 C 56 0.00 1135 reject_low 10 ALIGNMENT 955 YS2-9c17.p1k chr09 1131 33 4301 5405 C 1099 96.27 1135 ambiguous_tel 0 ALIGNMENT 24 YS2-9c17.p1k chr08 840 811 3639 3668 C 30 93.33 1135 reject_low 13 ALIGNMENT 50 YS2-9c17.p1k chr08 970 915 3564 3619 C 56 96.43 1135 reject_low 13 ALIGNMENT 840 YS2-9c17.q1k chr02 158 1220 2 1081 F 1063 94.54 1242 reject_low 17 ALIGNMENT 24 YS2-9c17.p1k chr12 840 811 3907 3936 C 30 93.33 1135 reject_low 16 ALIGNMENT 0 YS2-9c17.q1k chr16 62 157 2 1 F 96 0.00 1242 reject_low 7 ALIGNMENT 419 YS2-9c17.p1k chr05 468 33 4586 5020 C 436 99.08 1135 reject_low 10 ALIGNMENT 0 YS2-9c17.p1k chr16 749 810 944225 944240 F 62 0.00 1135 reject_low 12 ALIGNMENT 24 YS2-9c17.p1k chr06 840 811 2944 2973 C 30 93.33 1135 reject_low 18 ALIGNMENT 887 YS2-9c17.q1k chr12 68 1220 5762 6921 F 1153 94.19 1242 reject_low 15 ALIGNMENT 53 YS2-9c17.p1k chr13 748 692 3829 3885 C 57 98.25 1135 reject_low 14 ALIGNMENT 897 YS2-9c17.q1k chr07 1220 90 1089799 1090943 C 1131 94.78 1242 ambiguous_tel 5 ALIGNMENT 0 YS2-9c17.p1k chr06 810 749 2974 2989 C 62 0.00 1135 reject_low 18 ALIGNMENT 0 YS2-9c17.q1k chr05 62 173 2 1 F 112 0.00 1242 reject_low 10 ALIGNMENT 897 YS2-9c17.q1k chr05 1220 90 575722 576866 C 1131 94.78 1242 ambiguous_tel 4 ALIGNMENT 915 YS2-9c17.q1k chr08 1220 68 561246 562419 C 1153 94.71 1242 reject_low 11 ALIGNMENT 38 YS2-9c17.p1k chr08 89 33 3743 3798 C 57 91.23 1135 reject_low 13 ALIGNMENT 915 YS2-9c17.q1k chr13 68 1220 89 1262 F 1153 94.71 1242 reject_low 14 ALIGNMENT 442 YS2-9c17.p1k chr12 575 1131 1067125 1067687 F 557 93.90 1135 reject_low 9 ALIGNMENT 24 YS2-9c17.p1k chr02 840 811 4108 4137 C 30 93.33 1135 reject_low 17 ALIGNMENT 0 YS2-9c17.p1k chr12 914 841 3888 3906 C 74 0.00 1135 reject_low 16 ALIGNMENT 53 YS2-9c17.p1k chr08 748 692 3685 3741 C 57 98.25 1135 reject_low 13 ALIGNMENT 813 YS2-9c17.q1k chr04 1220 216 1530893 1531914 C 1005 95.22 1242 reject_low 8 ALIGNMENT 0 YS2-9c17.p1k chr02 691 90 4211 4211 C 602 0.00 1135 reject_low 17 ALIGNMENT 50 YS2-9c17.p1k chr16 915 970 944290 944345 F 56 96.43 1135 reject_low 12 ALIGNMENT 50 YS2-9c17.p1k chr08 915 970 558743 558798 F 56 96.43 1135 reject_low 11 ALIGNMENT 0 YS2-9c17.p1k chr08 810 749 3669 3684 C 62 0.00 1135 reject_low 13 ALIGNMENT 24 YS2-9c17.p1k chr08 811 840 558694 558723 F 30 93.33 1135 reject_low 11 ALIGNMENT 944 YS2-9c17.p1k chr05 33 1131 571875 572978 F 1099 95.91 1135 ambiguous_tel 4 ALIGNMENT 96 YS2-9c18.p1k chr13 28 252 761659 761883 F 225 82.67 1157 reject_low 1 ALIGNMENT 911 YS2-9c18.p1k chr09 28 1120 341194 342288 F 1093 95.43 1157 accept 0 ALIGNMENT 884 YS2-9c18.q1k chr09 1036 38 344460 345465 C 999 96.50 1127 accept 0 ALIGNMENT 0 YS2-9c18.p1k chr13 253 843 761883 761882 F 591 0.00 1157 reject_low 1 ALIGNMENT 921 YS2-9c19.p1k chr15 30 1130 838263 839357 F 1101 96.09 1140 accept 0 ALIGNMENT 948 YS2-9c19.q1k chr15 1186 38 841664 842818 C 1149 95.47 1260 accept 0 ALIGNMENT 691 YS2-9c20.q1k chr09 860 35 344651 345465 C 826 96.00 1307 accept 0 ALIGNMENT 338 YS2-9c20.p1k chr09 174 843 341354 342015 F 670 84.63 1226 accept 0 ALIGNMENT 904 YS2-9c22.q1k chr14 1100 39 696407 697461 C 1062 96.42 1110 accept 0 ALIGNMENT 916 YS2-9c22.p1k chr14 27 1109 692234 693320 F 1083 95.75 1110 accept 0 ALIGNMENT 366 YS2-9c23.q1k chr12 613 105 467638 468143 C 509 92.14 1282 accept 1 ALIGNMENT 366 YS2-9c23.q1k chr12 613 105 458501 459006 C 509 92.14 1282 accept 0 ALIGNMENT 682 YS2-9c23.p1k chr12 196 953 454369 455123 F 758 97.36 1151 accept 0 ALIGNMENT 682 YS2-9c23.p1k chr12 196 953 463506 464260 F 758 97.36 1151 accept 1 ALIGNMENT 973 YS2-9c24.q1k chr08 1108 39 424877 425946 C 1070 97.66 1110 accept 0 ALIGNMENT 940 YS2-9c24.p1k chr08 36 1114 423363 424440 F 1079 95.64 1114 accept 0 ALIGNMENT 0 YS2-9d02.q1k chr12 257 296 462043 462042 F 40 0.00 296 accept 1 ALIGNMENT 0 YS2-9d02.q1k vc_5 257 62 5064 5063 C 196 0.00 296 reject_low 6 ALIGNMENT 39 YS2-9d02.q1k vc_5 296 258 5025 5063 C 39 100.00 296 reject_low 6 ALIGNMENT 38 YS2-9d02.q1k vc_7 259 296 13525 13562 F 38 100.00 296 reject_low 7 ALIGNMENT 41 YS2-9d02.q1k vc_2 296 256 2105 2145 C 41 100.00 296 reject_low 3 ALIGNMENT 0 YS2-9d02.q1k chr12 257 296 452906 452905 F 40 0.00 296 accept 0 ALIGNMENT 226 YS2-9d02.q1k chr12 30 256 461817 462043 F 227 100.00 296 accept 1 ALIGNMENT 41 YS2-9d02.q1k vc_4 256 296 5831 5871 F 41 100.00 296 reject_low 5 ALIGNMENT 41 YS2-9d02.q1k vc_3 296 256 2472 2512 C 41 100.00 296 reject_low 4 ALIGNMENT 226 YS2-9d02.q1k chr12 30 256 452680 452906 F 227 100.00 296 accept 0 ALIGNMENT 0 YS2-9d02.q1k vc_3 255 62 2513 2512 C 194 0.00 296 reject_low 4 ALIGNMENT 36 YS2-9d02.q1k vc_5 293 258 1 36 C 36 100.00 296 reject_low 8 ALIGNMENT 0 YS2-9d02.q1k vc_5 257 62 37 36 C 196 0.00 296 reject_low 8 ALIGNMENT 0 YS2-9d02.q1k vc_7 62 258 13525 13524 F 197 0.00 296 reject_low 7 ALIGNMENT 0 YS2-9d02.q1k vc_2 255 62 2146 2145 C 194 0.00 296 reject_low 3 ALIGNMENT 0 YS2-9d02.q1k vc_4 62 255 5831 5830 F 194 0.00 296 reject_low 5 ALIGNMENT 0 YS2-9d02.q1k vc_1 255 62 2513 2512 C 194 0.00 296 reject_low 2 ALIGNMENT 41 YS2-9d02.q1k vc_1 296 256 2472 2512 C 41 100.00 296 reject_low 2 ALIGNMENT 0 YS2-9d03.p1k chr07 97 62 424363 424362 C 36 0.00 1177 reject_low 1 ALIGNMENT 0 YS2-9d03.p1k chr07 879 474 423988 423987 C 406 0.00 1177 reject_low 1 ALIGNMENT 708 YS2-9d03.q1k chr07 2 888 205648 206530 F 887 95.38 914 accept 0 ALIGNMENT 122 YS2-9d03.p1k chr07 473 98 423987 424362 C 376 78.19 1177 reject_low 1 ALIGNMENT 888 YS2-9d03.p1k chr07 1174 35 208341 209466 C 1140 94.39 1177 accept 0 ALIGNMENT 0 YS2-9d04.p1k chr04 518 774 340320 340319 F 257 0.00 1173 reject_low 1 ALIGNMENT 801 YS2-9d04.p1k chr12 31 1139 696514 697605 F 1109 92.97 1173 accept 0 ALIGNMENT 990 YS2-9d04.q1k chr12 1161 39 699997 701123 C 1123 96.88 1193 accept 0 ALIGNMENT 27 YS2-9d04.p1k chr04 477 517 340281 340320 F 41 97.56 1173 reject_low 1 ALIGNMENT 0 YS2-9d04.p1k chr04 62 476 340281 340280 F 415 0.00 1173 reject_low 1 ALIGNMENT 910 YS2-9d05.q1k chr14 1092 39 637990 639030 C 1054 97.25 1176 accept 0 ALIGNMENT 0 YS2-9d06.p1k chr15 598 62 2121 2120 C 537 0.00 1170 reject_low 5 ALIGNMENT 530 YS2-9d06.p1k chr06 1084 182 14322 15221 C 903 86.93 1170 reject_low 3 ALIGNMENT 193 YS2-9d06.p1k chr15 988 599 1732 2120 C 390 83.33 1170 reject_low 5 ALIGNMENT 603 YS2-9d06.p1k chr14 1000 33 16221 17188 C 968 87.81 1170 reject_low 1 ALIGNMENT 735 YS2-9d06.p1k chr04 1084 33 17594 18644 C 1052 90.59 1170 accept_tel 0 ALIGNMENT 0 YS2-9d06.p1k chr06 181 62 15222 15221 C 120 0.00 1170 reject_low 3 ALIGNMENT 0 YS2-9d06.p1k chr03 62 152 314058 314057 F 91 0.00 1170 reject_low 4 ALIGNMENT 491 YS2-9d06.p1k chr10 32 1082 727115 728164 F 1051 82.87 1170 reject_low 2 ALIGNMENT 430 YS2-9d06.p1k chr03 153 1000 314058 314904 F 848 83.96 1170 reject_low 4 ALIGNMENT 39 YS2-9d07.q1k vc_5 610 572 5025 5063 C 39 100.00 610 reject_low 6 ALIGNMENT 0 YS2-9d07.p1k chr10 553 570 130947 130946 F 18 0.00 570 accept_chi 1 ALIGNMENT 40 YS2-9d07.q1k vc_3 610 571 2472 2511 C 40 100.00 610 reject_low 4 ALIGNMENT 0 YS2-9d07.q1k vc_4 62 570 5832 5831 F 509 0.00 610 reject_low 5 ALIGNMENT 38 YS2-9d07.q1k vc_7 573 610 13525 13562 F 38 100.00 610 reject_low 7 ALIGNMENT 0 YS2-9d07.q1k vc_3 570 62 2512 2511 C 509 0.00 610 reject_low 4 ALIGNMENT 0 YS2-9d07.q1k vc_7 62 572 13525 13524 F 511 0.00 610 reject_low 7 ALIGNMENT 0 YS2-9d07.q1k vc_5 571 62 5064 5063 C 510 0.00 610 reject_low 6 ALIGNMENT 40 YS2-9d07.q1k vc_2 610 571 2105 2144 C 40 100.00 610 reject_low 3 ALIGNMENT 40 YS2-9d07.q1k vc_1 610 571 2472 2511 C 40 100.00 610 reject_low 2 ALIGNMENT 0 YS2-9d07.q1k vc_1 570 62 2512 2511 C 509 0.00 610 reject_low 2 ALIGNMENT 495 YS2-9d07.q1k chr10 570 43 130419 130947 C 528 99.43 610 accept_chi 0 ALIGNMENT 40 YS2-9d07.q1k vc_4 571 610 5832 5871 F 40 100.00 610 reject_low 5 ALIGNMENT 478 YS2-9d07.p1k chr10 35 552 130427 130947 F 518 99.03 570 accept_chi 1 ALIGNMENT 0 YS2-9d07.q1k vc_2 570 62 2145 2144 C 509 0.00 610 reject_low 3 ALIGNMENT 0 YS2-9d07.q1k chr10 610 571 130420 130419 C 40 0.00 610 accept_chi 0 ALIGNMENT 36 YS2-9d07.q1k vc_5 607 572 1 36 C 36 100.00 610 reject_low 8 ALIGNMENT 0 YS2-9d07.q1k vc_5 571 62 37 36 C 510 0.00 610 reject_low 8 ALIGNMENT 1009 YS2-9d09.q1k chr07 1172 30 716368 717514 C 1143 96.85 1178 accept 0 ALIGNMENT 972 YS2-9d10.p1k chr16 39 1134 292743 293849 F 1096 96.90 1190 accept 0 ALIGNMENT 1017 YS2-9d10.q1k chr16 1188 37 296158 297321 C 1152 96.61 1194 accept 0 ALIGNMENT 222 YS2-9d12.p1k chr16 36 266 781063 781293 F 231 99.57 284 accept_chi 0 ALIGNMENT 38 YS2-9d12.q1k vc_7 258 295 13525 13562 F 38 100.00 295 reject_low 6 ALIGNMENT 0 YS2-9d12.q1k vc_5 256 62 5064 5063 C 195 0.00 295 reject_low 5 ALIGNMENT 0 YS2-9d12.q1k vc_7 62 257 13525 13524 F 196 0.00 295 reject_low 6 ALIGNMENT 0 YS2-9d12.q1k vc_5 256 62 37 36 C 195 0.00 295 reject_low 7 ALIGNMENT 209 YS2-9d12.q1k chr16 255 39 781063 781279 C 217 99.54 295 accept_chi 1 ALIGNMENT 0 YS2-9d12.q1k vc_4 62 255 5832 5831 F 194 0.00 295 reject_low 4 ALIGNMENT 40 YS2-9d12.q1k vc_3 295 256 2472 2511 C 40 100.00 295 reject_low 3 ALIGNMENT 36 YS2-9d12.q1k vc_5 292 257 1 36 C 36 100.00 295 reject_low 7 ALIGNMENT 0 YS2-9d12.q1k chr16 295 256 781064 781063 C 40 0.00 295 accept_chi 1 ALIGNMENT 40 YS2-9d12.q1k vc_4 256 295 5832 5871 F 40 100.00 295 reject_low 4 ALIGNMENT 40 YS2-9d12.q1k vc_1 295 256 2472 2511 C 40 100.00 295 reject_low 2 ALIGNMENT 39 YS2-9d12.q1k vc_5 295 257 5025 5063 C 39 100.00 295 reject_low 5 ALIGNMENT 0 YS2-9d12.q1k vc_1 255 62 2512 2511 C 194 0.00 295 reject_low 2 ALIGNMENT 0 YS2-9d12.p1k chr16 267 284 781293 781292 F 18 0.00 284 accept_chi 0 ALIGNMENT 0 YS2-9d12.q1k vc_3 255 62 2512 2511 C 194 0.00 295 reject_low 3 ALIGNMENT 0 YS2-9d13.p1k chr05 613 706 424307 424306 F 94 0.00 706 reject_low 2 ALIGNMENT 659 YS2-9d13.q1k chr07 51 732 148142 148823 F 682 100.00 733 accept_chi 0 ALIGNMENT 0 YS2-9d13.q1k chr05 143 62 424308 424307 C 82 0.00 733 reject_low 3 ALIGNMENT 271 YS2-9d13.p1k chr05 253 612 423948 424307 F 360 92.22 706 reject_low 2 ALIGNMENT 655 YS2-9d13.p1k chr07 705 28 148142 148819 C 678 100.00 706 accept_chi 1 ALIGNMENT 271 YS2-9d13.q1k chr05 503 144 423948 424307 C 360 92.22 733 reject_low 3 ALIGNMENT 0 YS2-9d13.p1k chr05 62 252 423948 423947 F 191 0.00 706 reject_low 2 ALIGNMENT 0 YS2-9d13.q1k chr05 733 504 423949 423948 C 230 0.00 733 reject_low 3 ALIGNMENT 28 YS2-9d14.q1k vc_3 1089 1049 2473 2514 C 41 90.24 1155 reject_low 11 ALIGNMENT 0 YS2-9d14.q1k vc_3 1048 62 2515 2514 C 987 0.00 1155 reject_low 11 ALIGNMENT 956 YS2-9d14.q1k chr12 44 1044 454015 455016 F 1001 98.80 1155 accept 0 ALIGNMENT 0 YS2-9d14.q1k vc_4 62 1048 5829 5828 F 987 0.00 1155 reject_low 3 ALIGNMENT 42 YS2-9d14.q1k vc_4 1091 1154 6354 6418 F 64 90.62 1155 reject_low 3 ALIGNMENT 28 YS2-9d14.q1k vc_1 1089 1049 2473 2514 C 41 90.24 1155 reject_low 10 ALIGNMENT 930 YS2-9d14.p1k chr12 1035 35 463152 464155 C 1001 98.30 1147 accept 0 ALIGNMENT 42 YS2-9d14.q1k vc_4 1154 1091 1469 1533 C 64 90.62 1155 reject_low 7 ALIGNMENT 0 YS2-9d14.q1k vc_4 62 1090 127 126 F 1029 0.00 1155 reject_low 6 ALIGNMENT 42 YS2-9d14.q1k vc_4 1091 1154 127 191 F 64 90.62 1155 reject_low 6 ALIGNMENT 42 YS2-9d14.q1k vc_4 1154 1091 5747 5811 C 64 90.62 1155 reject_low 8 ALIGNMENT 0 YS2-9d14.q1k vc_4 1090 62 5812 5811 C 1029 0.00 1155 reject_low 8 ALIGNMENT 28 YS2-9d14.q1k vc_4 1049 1089 5829 5870 F 41 90.24 1155 reject_low 3 ALIGNMENT 0 YS2-9d14.q1k vc_4 1090 62 1534 1533 C 1029 0.00 1155 reject_low 7 ALIGNMENT 956 YS2-9d14.q1k chr12 44 1044 463152 464153 F 1001 98.80 1155 reject_low 1 ALIGNMENT 42 YS2-9d14.q1k vc_1 1091 1154 2532 2596 F 64 90.62 1155 reject_low 4 ALIGNMENT 42 YS2-9d14.q1k vc_3 1091 1154 2532 2596 F 64 90.62 1155 reject_low 5 ALIGNMENT 0 YS2-9d14.q1k vc_7 1090 62 2727 2726 C 1029 0.00 1155 reject_low 9 ALIGNMENT 0 YS2-9d14.q1k vc_1 1048 62 2515 2514 C 987 0.00 1155 reject_low 10 ALIGNMENT 42 YS2-9d14.q1k vc_7 1154 1091 2662 2726 C 64 90.62 1155 reject_low 9 ALIGNMENT 0 YS2-9d14.q1k vc_4 1090 1090 5871 6353 F 1 0.00 1155 reject_low 3 ALIGNMENT 930 YS2-9d14.p1k chr12 1035 35 454015 455018 C 1001 98.30 1147 reject_low 2 ALIGNMENT 0 YS2-9d14.q1k vc_1 62 1090 2532 2531 F 1029 0.00 1155 reject_low 4 ALIGNMENT 0 YS2-9d14.q1k vc_3 62 1090 2532 2531 F 1029 0.00 1155 reject_low 5 ALIGNMENT 0 YS2-9d16.q1k vc_7 62 210 13525 13524 F 149 0.00 248 reject_low 7 ALIGNMENT 41 YS2-9d16.q1k vc_2 248 208 2105 2145 C 41 100.00 248 reject_low 3 ALIGNMENT 0 YS2-9d16.q1k vc_2 207 62 2146 2145 C 146 0.00 248 reject_low 3 ALIGNMENT 0 YS2-9d16.p1k chr03 205 223 227667 227666 F 19 0.00 223 accept_chi 1 ALIGNMENT 38 YS2-9d16.q1k vc_7 211 248 13525 13562 F 38 100.00 248 reject_low 7 ALIGNMENT 0 YS2-9d16.q1k chr03 248 212 227493 227492 C 37 0.00 248 accept_chi 0 ALIGNMENT 0 YS2-9d16.q1k vc_5 209 62 5064 5063 C 148 0.00 248 reject_low 6 ALIGNMENT 0 YS2-9d16.q1k vc_5 209 62 37 36 C 148 0.00 248 reject_low 8 ALIGNMENT 160 YS2-9d16.q1k chr03 211 36 227492 227667 C 176 98.86 248 accept_chi 0 ALIGNMENT 39 YS2-9d16.q1k vc_5 248 210 5025 5063 C 39 100.00 248 reject_low 6 ALIGNMENT 0 YS2-9d16.q1k vc_4 62 207 5831 5830 F 146 0.00 248 reject_low 5 ALIGNMENT 36 YS2-9d16.q1k vc_5 245 210 1 36 C 36 100.00 248 reject_low 8 ALIGNMENT 41 YS2-9d16.q1k vc_1 248 208 2472 2512 C 41 100.00 248 reject_low 2 ALIGNMENT 0 YS2-9d16.q1k vc_3 207 62 2513 2512 C 146 0.00 248 reject_low 4 ALIGNMENT 41 YS2-9d16.q1k vc_3 248 208 2472 2512 C 41 100.00 248 reject_low 4 ALIGNMENT 155 YS2-9d16.p1k chr03 31 204 227494 227667 F 174 98.28 223 accept_chi 1 ALIGNMENT 41 YS2-9d16.q1k vc_4 208 248 5831 5871 F 41 100.00 248 reject_low 5 ALIGNMENT 0 YS2-9d16.q1k vc_1 207 62 2513 2512 C 146 0.00 248 reject_low 2 ALIGNMENT 38 YS2-9d18.q1k vc_7 237 274 13525 13562 F 38 100.00 274 reject_low 7 ALIGNMENT 41 YS2-9d18.q1k vc_1 274 234 2472 2512 C 41 100.00 274 reject_low 2 ALIGNMENT 0 YS2-9d18.q1k vc_5 235 62 37 36 C 174 0.00 274 reject_low 8 ALIGNMENT 0 YS2-9d18.q1k vc_4 62 233 5831 5830 F 172 0.00 274 reject_low 5 ALIGNMENT 0 YS2-9d18.q1k vc_7 62 236 13525 13524 F 175 0.00 274 reject_low 7 ALIGNMENT 190 YS2-9d18.q1k chr16 29 233 90241 90445 F 205 99.02 274 accept_chi 1 ALIGNMENT 0 YS2-9d18.q1k vc_2 233 62 2146 2145 C 172 0.00 274 reject_low 3 ALIGNMENT 0 YS2-9d18.q1k vc_5 235 62 5064 5063 C 174 0.00 274 reject_low 6 ALIGNMENT 41 YS2-9d18.q1k vc_2 274 234 2105 2145 C 41 100.00 274 reject_low 3 ALIGNMENT 194 YS2-9d18.p1k chr16 234 26 90237 90445 C 209 99.04 252 accept_chi 0 ALIGNMENT 0 YS2-9d18.q1k vc_3 233 62 2513 2512 C 172 0.00 274 reject_low 4 ALIGNMENT 0 YS2-9d18.q1k chr16 234 274 90445 90444 F 41 0.00 274 accept_chi 1 ALIGNMENT 36 YS2-9d18.q1k vc_5 271 236 1 36 C 36 100.00 274 reject_low 8 ALIGNMENT 0 YS2-9d18.q1k vc_1 233 62 2513 2512 C 172 0.00 274 reject_low 2 ALIGNMENT 41 YS2-9d18.q1k vc_4 234 274 5831 5871 F 41 100.00 274 reject_low 5 ALIGNMENT 0 YS2-9d18.p1k chr16 252 235 90238 90237 C 18 0.00 252 accept_chi 0 ALIGNMENT 41 YS2-9d18.q1k vc_3 274 234 2472 2512 C 41 100.00 274 reject_low 4 ALIGNMENT 39 YS2-9d18.q1k vc_5 274 236 5025 5063 C 39 100.00 274 reject_low 6 ALIGNMENT 0 YS2-9d20.q1k vc_5 378 62 5064 5063 C 317 0.00 417 reject_low 7 ALIGNMENT 0 YS2-9d20.q1k vc_4 62 374 5829 5828 F 313 0.00 417 reject_low 6 ALIGNMENT 0 YS2-9d20.p1k chr12 371 388 457582 457581 F 18 0.00 388 accept 0 ALIGNMENT 36 YS2-9d20.q1k vc_5 414 379 1 36 C 36 100.00 417 reject_low 9 ALIGNMENT 0 YS2-9d20.q1k chr12 417 377 466382 466381 C 41 0.00 417 accept 0 ALIGNMENT 0 YS2-9d20.q1k vc_2 374 62 2148 2147 C 313 0.00 417 reject_low 4 ALIGNMENT 42 YS2-9d20.q1k vc_2 417 375 2105 2147 C 43 100.00 417 reject_low 4 ALIGNMENT 337 YS2-9d20.q1k chr12 376 38 457244 457582 C 339 100.00 417 reject_low 2 ALIGNMENT 337 YS2-9d20.p1k chr12 32 370 466381 466719 F 339 100.00 388 reject_low 1 ALIGNMENT 0 YS2-9d20.q1k chr12 417 377 457245 457244 C 41 0.00 417 reject_low 2 ALIGNMENT 0 YS2-9d20.q1k vc_5 378 62 37 36 C 317 0.00 417 reject_low 9 ALIGNMENT 337 YS2-9d20.q1k chr12 376 38 466381 466719 C 339 100.00 417 accept 0 ALIGNMENT 42 YS2-9d20.q1k vc_3 417 375 2472 2514 C 43 100.00 417 reject_low 5 ALIGNMENT 0 YS2-9d20.q1k vc_3 374 62 2515 2514 C 313 0.00 417 reject_low 5 ALIGNMENT 42 YS2-9d20.q1k vc_4 375 417 5829 5871 F 43 100.00 417 reject_low 6 ALIGNMENT 39 YS2-9d20.q1k vc_5 417 379 5025 5063 C 39 100.00 417 reject_low 7 ALIGNMENT 0 YS2-9d20.p1k chr12 371 388 466719 466718 F 18 0.00 388 reject_low 1 ALIGNMENT 337 YS2-9d20.p1k chr12 32 370 457244 457582 F 339 100.00 388 accept 0 ALIGNMENT 0 YS2-9d20.q1k vc_1 374 62 2515 2514 C 313 0.00 417 reject_low 3 ALIGNMENT 38 YS2-9d20.q1k vc_7 380 417 13525 13562 F 38 100.00 417 reject_low 8 ALIGNMENT 0 YS2-9d20.q1k vc_7 62 379 13525 13524 F 318 0.00 417 reject_low 8 ALIGNMENT 42 YS2-9d20.q1k vc_1 417 375 2472 2514 C 43 100.00 417 reject_low 3 ALIGNMENT 836 YS2-9d21.q1k chr09 34 1021 143618 144613 F 988 96.56 1120 accept 0 ALIGNMENT 922 YS2-9d21.p1k chr09 1094 32 143682 144757 C 1063 97.18 1094 accept 0 ALIGNMENT 915 YS2-9d22.p1k chr07 1087 28 829945 831000 C 1060 97.36 1101 accept 0 ALIGNMENT 921 YS2-9d22.q1k chr07 31 1066 826505 827547 F 1036 97.88 1085 accept 0 ALIGNMENT 41 YS2-9d23.q1k vc_4 388 428 5831 5871 F 41 100.00 428 reject_low 5 ALIGNMENT 0 YS2-9d23.q1k chr14 428 388 79092 79091 C 41 0.00 428 accept_chi 1 ALIGNMENT 0 YS2-9d23.q1k vc_4 62 387 5831 5830 F 326 0.00 428 reject_low 5 ALIGNMENT 41 YS2-9d23.q1k vc_2 428 388 2105 2145 C 41 100.00 428 reject_low 3 ALIGNMENT 41 YS2-9d23.q1k vc_3 428 388 2472 2512 C 41 100.00 428 reject_low 4 ALIGNMENT 0 YS2-9d23.q1k vc_2 387 62 2146 2145 C 326 0.00 428 reject_low 3 ALIGNMENT 0 YS2-9d23.q1k vc_5 389 62 5064 5063 C 328 0.00 428 reject_low 6 ALIGNMENT 0 YS2-9d23.q1k vc_1 387 62 2513 2512 C 326 0.00 428 reject_low 2 ALIGNMENT 39 YS2-9d23.q1k vc_5 428 390 5025 5063 C 39 100.00 428 reject_low 6 ALIGNMENT 0 YS2-9d23.q1k vc_7 62 390 13525 13524 F 329 0.00 428 reject_low 7 ALIGNMENT 327 YS2-9d23.p1k chr14 30 382 79091 79444 F 353 98.02 400 accept_chi 0 ALIGNMENT 0 YS2-9d23.q1k vc_5 389 62 37 36 C 328 0.00 428 reject_low 8 ALIGNMENT 0 YS2-9d23.q1k vc_3 387 62 2513 2512 C 326 0.00 428 reject_low 4 ALIGNMENT 0 YS2-9d23.p1k chr14 383 400 79444 79443 F 18 0.00 400 accept_chi 0 ALIGNMENT 318 YS2-9d23.q1k chr14 387 37 79091 79444 C 351 97.44 428 accept_chi 1 ALIGNMENT 38 YS2-9d23.q1k vc_7 391 428 13525 13562 F 38 100.00 428 reject_low 7 ALIGNMENT 36 YS2-9d23.q1k vc_5 425 390 1 36 C 36 100.00 428 reject_low 8 ALIGNMENT 41 YS2-9d23.q1k vc_1 428 388 2472 2512 C 41 100.00 428 reject_low 2 ALIGNMENT 178 YS2-9d24.p1k chrm 251 36 37042 37257 C 216 100.00 268 accept_chi 0 ALIGNMENT 39 YS2-9d24.q1k vc_5 292 254 5025 5063 C 39 100.00 292 reject_low 6 ALIGNMENT 40 YS2-9d24.q1k vc_3 292 253 2472 2511 C 40 100.00 292 reject_low 4 ALIGNMENT 40 YS2-9d24.q1k vc_2 292 253 2105 2144 C 40 100.00 292 reject_low 3 ALIGNMENT 40 YS2-9d24.q1k vc_1 292 253 2472 2511 C 40 100.00 292 reject_low 2 ALIGNMENT 0 YS2-9d24.q1k chrm 253 292 37257 37256 F 40 0.00 292 accept_chi 1 ALIGNMENT 0 YS2-9d24.q1k vc_5 253 62 37 36 C 192 0.00 292 reject_low 8 ALIGNMENT 0 YS2-9d24.q1k vc_3 252 62 2512 2511 C 191 0.00 292 reject_low 4 ALIGNMENT 40 YS2-9d24.q1k vc_4 253 292 5832 5871 F 40 100.00 292 reject_low 5 ALIGNMENT 0 YS2-9d24.q1k vc_7 62 254 13525 13524 F 193 0.00 292 reject_low 7 ALIGNMENT 0 YS2-9d24.q1k vc_4 62 252 5832 5831 F 191 0.00 292 reject_low 5 ALIGNMENT 178 YS2-9d24.q1k chrm 37 252 37042 37257 F 216 100.00 292 accept_chi 1 ALIGNMENT 0 YS2-9d24.p1k chrm 268 252 37043 37042 C 17 0.00 268 accept_chi 0 ALIGNMENT 0 YS2-9d24.q1k vc_2 252 62 2145 2144 C 191 0.00 292 reject_low 3 ALIGNMENT 36 YS2-9d24.q1k vc_5 289 254 1 36 C 36 100.00 292 reject_low 8 ALIGNMENT 0 YS2-9d24.q1k vc_5 253 62 5064 5063 C 192 0.00 292 reject_low 6 ALIGNMENT 0 YS2-9d24.q1k vc_1 252 62 2512 2511 C 191 0.00 292 reject_low 2 ALIGNMENT 38 YS2-9d24.q1k vc_7 255 292 13525 13562 F 38 100.00 292 reject_low 7 ALIGNMENT 848 YS2-9e01.p1k chr05 49 1125 60869 61950 F 1077 94.80 1265 accept 0 ALIGNMENT 859 YS2-9e01.q1k chr05 1048 31 65807 66817 C 1018 95.58 1363 accept 0 ALIGNMENT 262 YS2-9e02.p1k chr01 592 37 218 770 C 556 85.61 1414 ambiguous_tel 13 ALIGNMENT 251 YS2-9e02.p1k chr10 518 37 7258 7736 C 482 87.14 1414 ambiguous_tel 17 ALIGNMENT 237 YS2-9e02.p1k chr08 42 616 556141 556718 F 575 84.00 1414 ambiguous_tel 18 ALIGNMENT 30 YS2-9e02.p1k chr08 487 443 5034 5078 C 45 91.11 1414 ambiguous_tel 21 ALIGNMENT 284 YS2-9e02.p1k chr10 37 616 744848 745419 F 580 86.21 1414 ambiguous_tel 8 ALIGNMENT 275 YS2-9e02.p1k chr12 37 610 1064309 1064882 F 574 85.71 1414 ambiguous_tel 10 ALIGNMENT 291 YS2-9e02.p1k chr05 37 610 569625 570192 F 574 86.76 1414 ambiguous_tel 7 ALIGNMENT 251 YS2-9e02.p1k chr04 37 628 1524639 1525218 F 592 84.63 1414 ambiguous_tel 14 ALIGNMENT 0 YS2-9e02.p1k chr08 518 488 5035 5034 C 31 0.00 1414 ambiguous_tel 21 ALIGNMENT 27 YS2-9e02.p1k chr14 616 556 6832 6892 C 61 85.25 1414 ambiguous_tel 20 ALIGNMENT 281 YS2-9e02.p1k chr13 631 37 5716 6313 C 595 85.55 1414 ambiguous_tel 6 ALIGNMENT 0 YS2-9e02.p1k chr08 442 422 5079 5084 C 21 0.00 1414 ambiguous_tel 21 ALIGNMENT 262 YS2-9e02.p1k chr02 612 42 5999 6572 C 571 84.76 1414 ambiguous_tel 12 ALIGNMENT 199 YS2-9e02.p1k chr08 421 37 5085 5473 C 385 86.49 1414 ambiguous_tel 21 ALIGNMENT 283 YS2-9e02.p1k chr04 634 37 273 873 C 598 85.62 1414 ambiguous_tel 4 ALIGNMENT 251 YS2-9e02.p1k chr09 518 37 7275 7753 C 482 87.14 1414 ambiguous_tel 16 ALIGNMENT 991 YS2-9e02.q1k chr07 40 1176 588567 589709 F 1137 96.13 1177 accept 0 ALIGNMENT 0 YS2-9e02.p1k chr03 546 543 578 570 C 4 0.00 1414 ambiguous_tel 19 ALIGNMENT 0 YS2-9e02.p1k chr14 555 550 6893 6886 C 6 0.00 1414 ambiguous_tel 20 ALIGNMENT 224 YS2-9e02.p1k chr16 724 38 6526 7191 C 687 81.66 1414 ambiguous_tel 1 ALIGNMENT 282 YS2-9e02.p1k chr02 37 631 812404 813001 F 595 85.55 1414 ambiguous_tel 5 ALIGNMENT 256 YS2-9e02.p1k chr14 42 634 783314 783901 F 593 84.32 1414 ambiguous_tel 11 ALIGNMENT 221 YS2-9e02.p1k chr15 38 724 1083950 1084615 F 687 81.51 1414 ambiguous_tel 2 ALIGNMENT 237 YS2-9e02.p1k chr12 687 42 11425 12049 C 646 82.82 1414 ambiguous_tel 3 ALIGNMENT 29 YS2-9e02.p1k chr03 610 547 514 577 C 64 85.94 1414 ambiguous_tel 19 ALIGNMENT 281 YS2-9e02.p1k chr07 616 39 176 748 C 578 86.16 1414 ambiguous_tel 9 ALIGNMENT 241 YS2-9e02.p1k chr14 549 37 6887 7397 C 513 85.58 1414 ambiguous_tel 20 ALIGNMENT 250 YS2-9e02.p1k chr03 542 37 571 1067 C 506 86.36 1414 ambiguous_tel 19 ALIGNMENT 249 YS2-9e02.p1k chr11 37 614 665573 666140 F 578 84.60 1414 ambiguous_tel 15 ALIGNMENT 850 YS2-9e03.q1k chr05 1016 31 65841 66817 C 986 96.25 1345 accept 0 ALIGNMENT 666 YS2-9e03.p1k chr05 214 1108 61017 61915 F 895 93.63 1256 accept 0 ALIGNMENT 241 YS2-9e04.p1k chr16 740 200 6532 7059 C 541 85.21 1308 ambiguous_tel 15 ALIGNMENT 277 YS2-9e04.p1k chr14 200 740 783442 783981 F 541 86.69 1308 ambiguous_tel 9 ALIGNMENT 277 YS2-9e04.p1k chr07 746 200 70 617 C 547 86.65 1308 ambiguous_tel 7 ALIGNMENT 283 YS2-9e04.p1k chr13 793 200 5578 6180 C 594 85.35 1308 ambiguous_tel 2 ALIGNMENT 266 YS2-9e04.p1k chr04 793 200 140 740 C 594 84.68 1308 ambiguous_tel 4 ALIGNMENT 259 YS2-9e04.p1k chr11 746 211 97 633 C 536 85.82 1308 ambiguous_tel 10 ALIGNMENT 259 YS2-9e04.p1k chr12 726 200 11409 11921 C 527 86.34 1308 ambiguous_tel 12 ALIGNMENT 252 YS2-9e04.p1k chr03 740 200 405 934 C 541 85.58 1308 ambiguous_tel 13 ALIGNMENT 240 YS2-9e04.p1k chr01 740 211 106 626 C 530 85.47 1308 ambiguous_tel 16 ALIGNMENT 250 YS2-9e04.p1k chr04 200 740 1524772 1525308 F 541 85.95 1308 ambiguous_tel 14 ALIGNMENT 219 YS2-9e04.p1k chr10 576 200 7225 7603 C 377 88.59 1308 reject_low 19 ALIGNMENT 314 YS2-9e04.p1k chr12 211 791 1064453 1065041 F 581 87.26 1308 ambiguous_tel 0 ALIGNMENT 271 YS2-9e04.p1k chr09 211 773 439240 439810 F 563 85.44 1308 ambiguous_tel 5 ALIGNMENT 281 YS2-9e04.p1k chr07 200 740 1083804 1084344 F 541 86.51 1308 ambiguous_tel 8 ALIGNMENT 264 YS2-9e04.p1k chr02 710 211 5922 6433 C 500 87.00 1308 ambiguous_tel 11 ALIGNMENT 229 YS2-9e04.p1k chr11 211 642 665717 666144 F 432 87.50 1308 ambiguous_tel 17 ALIGNMENT 0 YS2-9e04.p1k chr16 459 553 942784 942783 F 95 0.00 1308 reject_low 20 ALIGNMENT 219 YS2-9e04.p1k chr09 576 200 7242 7620 C 377 88.59 1308 reject_low 18 ALIGNMENT 168 YS2-9e04.p1k chr16 210 458 942537 942784 F 249 91.57 1308 reject_low 20 ALIGNMENT 283 YS2-9e04.p1k chr02 200 793 812537 813139 F 594 85.35 1308 ambiguous_tel 1 ALIGNMENT 281 YS2-9e04.p1k chr03 211 789 315954 316529 F 579 86.01 1308 ambiguous_tel 3 ALIGNMENT 283 YS2-9e04.p1k chr05 200 740 569758 570299 F 541 87.06 1308 ambiguous_tel 6 ALIGNMENT 1020 YS2-9e05.p1k chr15 35 1231 1049681 1050873 F 1197 95.82 1237 accept 0 ALIGNMENT 963 YS2-9e05.q1k chr15 1185 41 1053055 1054207 C 1145 96.16 1323 accept 0 ALIGNMENT 870 YS2-9e06.q1k chr15 31 1116 48470 49565 F 1086 94.20 1171 accept 0 ALIGNMENT 872 YS2-9e06.p1k chr15 1065 36 51387 52427 C 1030 95.73 1213 accept 0 ALIGNMENT 38 YS2-9e07.q1k vc_7 616 653 13525 13562 F 38 100.00 653 reject_low 9 ALIGNMENT 0 YS2-9e07.q1k chr04 613 653 1245514 1245513 F 41 0.00 653 manual 1 ALIGNMENT 569 YS2-9e07.p1k chr15 608 34 576816 577390 C 575 99.83 626 manual 2 ALIGNMENT 41 YS2-9e07.q1k vc_2 653 613 2105 2145 C 41 100.00 653 reject_low 5 ALIGNMENT 0 YS2-9e07.q1k vc_4 62 612 5831 5830 F 551 0.00 653 reject_low 7 ALIGNMENT 41 YS2-9e07.q1k vc_3 653 613 2472 2512 C 41 100.00 653 reject_low 6 ALIGNMENT 0 YS2-9e07.q1k vc_5 614 62 37 36 C 553 0.00 653 reject_low 10 ALIGNMENT 0 YS2-9e07.q1k chr15 613 653 577392 577391 F 41 0.00 653 manual 3 ALIGNMENT 570 YS2-9e07.q1k chr04 40 612 1244942 1245514 F 573 100.00 653 manual 1 ALIGNMENT 41 YS2-9e07.q1k vc_4 613 653 5831 5871 F 41 100.00 653 reject_low 7 ALIGNMENT 0 YS2-9e07.q1k vc_2 612 62 2146 2145 C 551 0.00 653 reject_low 5 ALIGNMENT 0 YS2-9e07.q1k vc_5 614 62 5064 5063 C 553 0.00 653 reject_low 8 ALIGNMENT 0 YS2-9e07.q1k vc_3 612 62 2513 2512 C 551 0.00 653 reject_low 6 ALIGNMENT 567 YS2-9e07.q1k chr15 40 612 576820 577392 F 573 99.83 653 manual 3 ALIGNMENT 0 YS2-9e07.q1k vc_1 612 62 2513 2512 C 551 0.00 653 reject_low 4 ALIGNMENT 0 YS2-9e07.p1k chr04 626 609 1244939 1244938 C 18 0.00 626 manual 0 ALIGNMENT 0 YS2-9e07.p1k chr15 626 609 576817 576816 C 18 0.00 626 manual 2 ALIGNMENT 39 YS2-9e07.q1k vc_5 653 615 5025 5063 C 39 100.00 653 reject_low 8 ALIGNMENT 572 YS2-9e07.p1k chr04 608 34 1244938 1245512 C 575 100.00 626 manual 0 ALIGNMENT 36 YS2-9e07.q1k vc_5 650 615 1 36 C 36 100.00 653 reject_low 10 ALIGNMENT 0 YS2-9e07.q1k vc_7 62 615 13525 13524 F 554 0.00 653 reject_low 9 ALIGNMENT 41 YS2-9e07.q1k vc_1 653 613 2472 2512 C 41 100.00 653 reject_low 4 ALIGNMENT 938 YS2-9e08.p1k chr15 1151 33 425254 426383 C 1119 95.80 1212 accept 0 ALIGNMENT 988 YS2-9e08.q1k chr15 37 1200 421233 422412 F 1164 95.62 1200 accept 0 ALIGNMENT 0 YS2-9e09.q1k vc_4 62 396 5831 5830 F 335 0.00 437 reject_low 3 ALIGNMENT 0 YS2-9e09.q1k vc_1 396 62 2513 2512 C 335 0.00 437 reject_low 1 ALIGNMENT 0 YS2-9e09.q1k vc_5 398 62 37 36 C 337 0.00 437 reject_low 6 ALIGNMENT 38 YS2-9e09.q1k vc_7 400 437 13525 13562 F 38 100.00 437 reject_low 5 ALIGNMENT 41 YS2-9e09.q1k vc_4 397 437 5831 5871 F 41 100.00 437 reject_low 3 ALIGNMENT 41 YS2-9e09.q1k vc_1 437 397 2472 2512 C 41 100.00 437 reject_low 1 ALIGNMENT 0 YS2-9e09.q1k vc_7 62 399 13525 13524 F 338 0.00 437 reject_low 5 ALIGNMENT 0 YS2-9e09.q1k vc_3 396 62 2513 2512 C 335 0.00 437 reject_low 2 ALIGNMENT 0 YS2-9e09.q1k vc_5 398 62 5064 5063 C 337 0.00 437 reject_low 4 ALIGNMENT 0 YS2-9e09.q1k chr04 398 437 1199234 1199233 F 40 0.00 437 accept 0 ALIGNMENT 41 YS2-9e09.q1k vc_3 437 397 2472 2512 C 41 100.00 437 reject_low 2 ALIGNMENT 39 YS2-9e09.q1k vc_5 437 399 5025 5063 C 39 100.00 437 reject_low 4 ALIGNMENT 359 YS2-9e09.q1k chr04 30 397 1198867 1199234 F 368 100.00 437 accept 0 ALIGNMENT 36 YS2-9e09.q1k vc_5 434 399 1 36 C 36 100.00 437 reject_low 6 ALIGNMENT 42 YS2-9e10.q1k vc_1 752 711 2472 2513 C 42 100.00 1180 reject_low 18 ALIGNMENT 26 YS2-9e10.p1k vc_1 789 759 2441 2472 C 31 96.77 1214 reject_low 25 ALIGNMENT 0 YS2-9e10.q1k vc_7 911 62 6412 6411 C 850 0.00 1180 reject_low 16 ALIGNMENT 0 YS2-9e10.q1k vc_7 62 714 13525 13524 F 653 0.00 1180 reject_low 23 ALIGNMENT 79 YS2-9e10.q1k vc_4 840 752 1446 1534 C 89 97.75 1180 reject_low 17 ALIGNMENT 0 YS2-9e10.q1k vc_4 62 710 5830 5829 F 649 0.00 1180 reject_low 15 ALIGNMENT 0 YS2-9e10.q1k vc_7 753 802 100 99 F 50 0.00 1180 reject_low 22 ALIGNMENT 0 YS2-9e10.q1k vc_2 802 753 2106 2105 C 50 0.00 1180 reject_low 19 ALIGNMENT 0 YS2-9e10.q1k vc_7 62 714 63 62 F 653 0.00 1180 reject_low 22 ALIGNMENT 0 YS2-9e10.p1k vc_3 758 77 2106 2105 C 682 0.00 1214 reject_low 6 ALIGNMENT 0 YS2-9e10.q1k vc_4 751 62 5813 5812 C 690 0.00 1180 reject_low 12 ALIGNMENT 333 YS2-9e10.p1k vc_1 1214 759 1644 2105 C 456 92.32 1214 reject_low 4 ALIGNMENT 0 YS2-9e10.q1k vc_4 62 751 126 125 F 690 0.00 1180 reject_low 14 ALIGNMENT 282 YS2-9e10.q1k vc_1 752 1169 2531 2938 F 418 91.15 1180 reject_low 9 ALIGNMENT 0 YS2-9e10.q1k vc_5 802 750 2 1 C 53 0.00 1180 reject_low 24 ALIGNMENT 0 YS2-9e10.q1k vc_5 802 753 5026 5025 C 50 0.00 1180 reject_low 21 ALIGNMENT 0 YS2-9e10.q1k vc_4 753 752 5872 6353 F 0 0.00 1180 reject_low 15 ALIGNMENT 0 YS2-9e10.q1k vc_3 710 62 2514 2513 C 649 0.00 1180 reject_low 20 ALIGNMENT 36 YS2-9e10.q1k vc_5 749 714 1 36 C 36 100.00 1180 reject_low 24 ALIGNMENT 0 YS2-9e10.q1k vc_7 962 963 5172 6360 C 0 0.00 1180 reject_low 16 ALIGNMENT 38 YS2-9e10.q1k vc_7 715 752 63 100 F 38 100.00 1180 reject_low 22 ALIGNMENT 0 YS2-9e10.q1k vc_1 802 753 2473 2472 C 50 0.00 1180 reject_low 18 ALIGNMENT 0 YS2-9e10.p1k vc_3 758 77 2473 2472 C 682 0.00 1214 reject_low 26 ALIGNMENT 0 YS2-9e10.q1k vc_7 753 802 13562 13561 F 50 0.00 1180 reject_low 23 ALIGNMENT 0 YS2-9e10.q1k vc_4 751 62 1535 1534 C 690 0.00 1180 reject_low 17 ALIGNMENT 275 YS2-9e10.q1k vc_4 1169 752 5403 5812 C 418 90.67 1180 reject_low 12 ALIGNMENT 48 YS2-9e10.q1k vc_7 963 912 6360 6411 C 52 98.08 1180|1,0 reject_low 16 ALIGNMENT 333 YS2-9e10.p1k vc_2 1214 759 1644 2105 C 456 92.32 1214 reject_low 5 ALIGNMENT 282 YS2-9e10.q1k vc_7 1169 752 2320 2727 C 418 91.15 1180 reject_low 3 ALIGNMENT 0 YS2-9e10.p1k chr15 837 743 628899 628898 C 95 0.00 1214 accept_chi 0 ALIGNMENT 39 YS2-9e10.q1k vc_5 752 714 5025 5063 C 39 100.00 1180 reject_low 21 ALIGNMENT 0 YS2-9e10.q1k vc_3 802 753 2473 2472 C 50 0.00 1180 reject_low 20 ALIGNMENT 0 YS2-9e10.q1k chr15 712 802 629580 629579 F 91 0.00 1180 accept_chi 1 ALIGNMENT 0 YS2-9e10.p1k vc_2 758 77 2106 2105 C 682 0.00 1214 reject_low 5 ALIGNMENT 333 YS2-9e10.p1k vc_5 1214 759 4564 5025 C 456 92.32 1214 reject_low 2 ALIGNMENT 42 YS2-9e10.q1k vc_4 711 752 5830 5871 F 42 100.00 1180 reject_low 15 ALIGNMENT 272 YS2-9e10.p1k vc_4 759 1108 5871 6226 F 350 93.71 1214 reject_low 8 ALIGNMENT 333 YS2-9e10.p1k vc_7 759 1214 100 561 F 456 92.11 1214 reject_low 3 ALIGNMENT 333 YS2-9e10.p1k vc_3 1214 759 1644 2105 C 456 92.32 1214 reject_low 6 ALIGNMENT 0 YS2-9e10.p1k vc_6 77 983 3585 3584 F 907 0.00 1214 reject_low 13 ALIGNMENT 0 YS2-9e10.p1k vc_7 77 758 100 99 F 682 0.00 1214 reject_low 3 ALIGNMENT 0 YS2-9e10.q1k vc_5 713 62 5064 5063 C 652 0.00 1180 reject_low 21 ALIGNMENT 147 YS2-9e10.q1k vc_4 752 913 126 287 F 162 97.53 1180 reject_low 14 ALIGNMENT 661 YS2-9e10.p1k chr15 742 65 628898 629575 C 678 99.71 1214 accept_chi 0 ALIGNMENT 0 YS2-9e10.p1k vc_1 837 790 2442 2441 C 48 0.00 1214 reject_low 25 ALIGNMENT 282 YS2-9e10.q1k vc_5 752 1169 2398 2805 F 418 91.15 1180 reject_low 2 ALIGNMENT 0 YS2-9e10.p1k vc_1 758 77 2473 2472 C 682 0.00 1214 reject_low 25 ALIGNMENT 0 YS2-9e10.q1k vc_2 62 751 2164 2163 F 690 0.00 1180 reject_low 10 ALIGNMENT 282 YS2-9e10.q1k vc_3 752 1169 2531 2938 F 418 91.15 1180 reject_low 11 ALIGNMENT 0 YS2-9e10.p1k vc_3 837 790 2442 2441 C 48 0.00 1214 reject_low 26 ALIGNMENT 26 YS2-9e10.p1k vc_3 789 759 2441 2472 C 31 96.77 1214 reject_low 26 ALIGNMENT 0 YS2-9e10.p1k vc_4 77 758 5871 5870 F 682 0.00 1214 reject_low 8 ALIGNMENT 0 YS2-9e10.q1k vc_1 62 751 2531 2530 F 690 0.00 1180 reject_low 9 ALIGNMENT 0 YS2-9e10.q1k vc_5 713 62 37 36 C 652 0.00 1180 reject_low 24 ALIGNMENT 282 YS2-9e10.q1k vc_2 752 1169 2164 2571 F 418 91.15 1180 reject_low 10 ALIGNMENT 333 YS2-9e10.p1k vc_7 759 1214 13562 14023 F 456 92.11 1214 reject_low 7 ALIGNMENT 0 YS2-9e10.p1k vc_1 758 77 2106 2105 C 682 0.00 1214 reject_low 4 ALIGNMENT 0 YS2-9e10.q1k vc_3 62 751 2531 2530 F 690 0.00 1180 reject_low 11 ALIGNMENT 0 YS2-9e10.q1k vc_7 751 62 2728 2727 C 690 0.00 1180 reject_low 3 ALIGNMENT 0 YS2-9e10.q1k vc_2 710 62 2147 2146 C 649 0.00 1180 reject_low 19 ALIGNMENT 87 YS2-9e10.q1k vc_7 1169 962 4975 5172 C 208 84.13 1180|0,1 reject_low 16 ALIGNMENT 0 YS2-9e10.p1k vc_7 77 758 13562 13561 F 682 0.00 1214 reject_low 7 ALIGNMENT 38 YS2-9e10.q1k vc_7 715 752 13525 13562 F 38 100.00 1180 reject_low 23 ALIGNMENT 42 YS2-9e10.q1k vc_3 752 711 2472 2513 C 42 100.00 1180 reject_low 20 ALIGNMENT 147 YS2-9e10.q1k vc_4 752 913 6353 6514 F 162 97.53 1180|1,0 reject_low 15 ALIGNMENT 0 YS2-9e10.p1k vc_5 758 77 5026 5025 C 682 0.00 1214 reject_low 2 ALIGNMENT 661 YS2-9e10.q1k chr15 30 711 628898 629580 F 682 99.56 1180 accept_chi 1 ALIGNMENT 147 YS2-9e10.p1k vc_6 984 1214 3585 3817 F 231 89.18 1214 reject_low 13 ALIGNMENT 42 YS2-9e10.q1k vc_2 752 711 2105 2146 C 42 100.00 1180 reject_low 19 ALIGNMENT 0 YS2-9e10.q1k vc_5 62 751 2398 2397 F 690 0.00 1180 reject_low 2 ALIGNMENT 0 YS2-9e10.q1k vc_1 710 62 2514 2513 C 649 0.00 1180 reject_low 18 ALIGNMENT 953 YS2-9e13.p1k chr07 34 1168 833957 835095 F 1135 96.30 1178 accept 0 ALIGNMENT 987 YS2-9e13.q1k chr07 1199 47 837007 838162 C 1153 95.75 1288 accept 0 ALIGNMENT 891 YS2-9e14.p1k chr12 33 1065 621575 622622 F 1033 96.03 1157 accept 0 ALIGNMENT 942 YS2-9e14.q1k chr12 1124 42 625455 626551 C 1083 96.68 1158 accept 0 ALIGNMENT 41 YS2-9e16.q1k vc_1 682 642 2472 2512 C 41 100.00 682 reject_low 2 ALIGNMENT 0 YS2-9e16.q1k chr16 682 643 522941 522940 C 40 0.00 682 accept_chi 1 ALIGNMENT 0 YS2-9e16.q1k vc_5 639 62 5068 5067 C 578 0.00 682 reject_low 6 ALIGNMENT 0 YS2-9e16.q1k vc_7 62 644 13525 13524 F 583 0.00 682 reject_low 7 ALIGNMENT 38 YS2-9e16.q1k vc_7 645 682 13525 13562 F 38 100.00 682 reject_low 7 ALIGNMENT 0 YS2-9e16.q1k vc_2 641 62 2146 2145 C 580 0.00 682 reject_low 3 ALIGNMENT 40 YS2-9e16.q1k vc_5 682 640 5025 5067 C 43 97.67 682 reject_low 6 ALIGNMENT 553 YS2-9e16.p1k chr16 34 623 522942 523531 F 590 98.98 641 accept_chi 0 ALIGNMENT 0 YS2-9e16.q1k vc_1 641 62 2513 2512 C 580 0.00 682 reject_low 2 ALIGNMENT 0 YS2-9e16.p1k chr16 624 641 523531 523530 F 18 0.00 641 accept_chi 0 ALIGNMENT 41 YS2-9e16.q1k vc_4 642 682 5831 5871 F 41 100.00 682 reject_low 5 ALIGNMENT 0 YS2-9e16.q1k vc_3 641 62 2513 2512 C 580 0.00 682 reject_low 4 ALIGNMENT 41 YS2-9e16.q1k vc_2 682 642 2105 2145 C 41 100.00 682 reject_low 3 ALIGNMENT 0 YS2-9e16.q1k vc_5 639 62 41 40 C 578 0.00 682 reject_low 8 ALIGNMENT 37 YS2-9e16.q1k vc_5 679 640 1 40 C 40 97.50 682 reject_low 8 ALIGNMENT 41 YS2-9e16.q1k vc_3 682 642 2472 2512 C 41 100.00 682 reject_low 4 ALIGNMENT 549 YS2-9e16.q1k chr16 642 49 522940 523531 C 594 98.82 682 accept_chi 1 ALIGNMENT 0 YS2-9e16.q1k vc_4 62 641 5831 5830 F 580 0.00 682 reject_low 5 ALIGNMENT 975 YS2-9e17.q1k chr16 1190 37 735634 736796 C 1154 96.27 1374 accept 0 ALIGNMENT 1001 YS2-9e17.p1k chr16 33 1192 733171 734339 F 1160 95.78 1195 accept 0 ALIGNMENT 0 YS2-9e19.p1k chr11 454 469 586666 586665 F 16 0.00 469 accept_chi 0 ALIGNMENT 0 YS2-9e19.q1k vc_3 457 62 2513 2512 C 396 0.00 498 reject_low 3 ALIGNMENT 38 YS2-9e19.q1k vc_7 461 498 13525 13562 F 38 100.00 498 reject_low 6 ALIGNMENT 0 YS2-9e19.q1k vc_5 459 62 37 36 C 398 0.00 498 reject_low 7 ALIGNMENT 0 YS2-9e19.q1k chr11 498 469 586233 586232 C 30 0.00 498 accept_chi 1 ALIGNMENT 0 YS2-9e19.q1k vc_7 62 460 13525 13524 F 399 0.00 498 reject_low 6 ALIGNMENT 41 YS2-9e19.q1k vc_1 498 458 2472 2512 C 41 100.00 498 reject_low 2 ALIGNMENT 39 YS2-9e19.q1k vc_5 498 460 5025 5063 C 39 100.00 498 reject_low 5 ALIGNMENT 36 YS2-9e19.q1k vc_5 495 460 1 36 C 36 100.00 498 reject_low 7 ALIGNMENT 0 YS2-9e19.q1k vc_5 459 62 5064 5063 C 398 0.00 498 reject_low 5 ALIGNMENT 0 YS2-9e19.q1k vc_4 62 457 5831 5830 F 396 0.00 498 reject_low 4 ALIGNMENT 41 YS2-9e19.q1k vc_4 458 498 5831 5871 F 41 100.00 498 reject_low 4 ALIGNMENT 407 YS2-9e19.q1k chr11 468 33 586232 586667 C 436 99.31 498 accept_chi 1 ALIGNMENT 400 YS2-9e19.p1k chr11 30 453 586242 586666 F 424 99.76 469 accept_chi 0 ALIGNMENT 0 YS2-9e19.q1k vc_1 457 62 2513 2512 C 396 0.00 498 reject_low 2 ALIGNMENT 41 YS2-9e19.q1k vc_3 498 458 2472 2512 C 41 100.00 498 reject_low 3 ALIGNMENT 937 YS2-9e20.q1k chr16 21 1148 680499 681633 F 1128 95.92 1152 accept 0 ALIGNMENT 1060 YS2-9e20.p1k chr16 1143 24 681330 682450 C 1120 98.30 1158 accept 0 ALIGNMENT 972 YS2-9e21.p1k chr02 1130 31 792638 793732 C 1100 96.64 1163 accept 0 ALIGNMENT 885 YS2-9e21.q1k chr02 31 1024 789095 790092 F 994 96.78 1213 accept 0 ALIGNMENT 178 YS2-9e22.q1k chr13 30 460 475774 476206 F 431 82.37 999 accept 0 ALIGNMENT 1023 YS2-9e23.q1k chr16 30 1149 904116 905234 F 1120 97.95 1152 accept 0 ALIGNMENT 963 YS2-9e23.p1k chr16 1088 31 906907 907967 C 1058 97.83 1088 accept 0 ALIGNMENT 0 YS2-9f01.q1k vc_3 835 62 2513 2512 C 774 0.00 1200 reject_low 13 ALIGNMENT 97 YS2-9f01.q1k vc_4 1066 876 5629 5812 C 191 87.43 1200 reject_low 5 ALIGNMENT 97 YS2-9f01.q1k vc_5 876 1066 2398 2581 F 191 87.43 1200 reject_low 6 ALIGNMENT 39 YS2-9f01.q1k vc_5 876 838 5025 5063 C 39 100.00 1200 reject_low 14 ALIGNMENT 44 YS2-9f01.q1k vc_4 962 876 1451 1534 C 87 88.51 1200 reject_low 10 ALIGNMENT 0 YS2-9f01.q1k vc_4 62 835 5831 5830 F 774 0.00 1200 reject_low 9 ALIGNMENT 794 YS2-9f01.q1k chr12 26 835 463394 464204 F 810 99.88 1200 accept 1 ALIGNMENT 0 YS2-9f01.q1k vc_5 837 62 5064 5063 C 776 0.00 1200 reject_low 14 ALIGNMENT 41 YS2-9f01.q1k vc_1 876 836 2472 2512 C 41 100.00 1200 reject_low 11 ALIGNMENT 97 YS2-9f01.q1k vc_3 876 1066 2531 2714 F 191 87.43 1200 reject_low 4 ALIGNMENT 41 YS2-9f01.q1k vc_3 876 836 2472 2512 C 41 100.00 1200 reject_low 13 ALIGNMENT 41 YS2-9f01.q1k vc_4 836 876 5831 5871 F 41 100.00 1200 reject_low 9 ALIGNMENT 0 YS2-9f01.q1k vc_3 62 875 2531 2530 F 814 0.00 1200 reject_low 4 ALIGNMENT 794 YS2-9f01.q1k chr12 26 835 454257 455067 F 810 99.88 1200 accept 0 ALIGNMENT 0 YS2-9f01.q1k vc_1 835 62 2513 2512 C 774 0.00 1200 reject_low 11 ALIGNMENT 0 YS2-9f01.q1k vc_5 837 62 37 36 C 776 0.00 1200 reject_low 16 ALIGNMENT 36 YS2-9f01.q1k vc_5 873 838 1 36 C 36 100.00 1200 reject_low 16 ALIGNMENT 0 YS2-9f01.q1k vc_4 877 876 5872 6353 F 0 0.00 1200 reject_low 9 ALIGNMENT 87 YS2-9f01.q1k vc_4 876 1039 6353 6510 F 164 88.41 1200|1,0 reject_low 9 ALIGNMENT 0 YS2-9f01.q1k vc_4 875 62 1535 1534 C 814 0.00 1200 reject_low 10 ALIGNMENT 0 YS2-9f01.q1k vc_2 835 62 2146 2145 C 774 0.00 1200 reject_low 12 ALIGNMENT 0 YS2-9f01.q1k vc_7 875 62 2728 2727 C 814 0.00 1200 reject_low 7 ALIGNMENT 87 YS2-9f01.q1k vc_4 876 1039 126 283 F 164 88.41 1200 reject_low 8 ALIGNMENT 38 YS2-9f01.q1k vc_7 839 876 13525 13562 F 38 100.00 1200 reject_low 15 ALIGNMENT 97 YS2-9f01.q1k vc_7 1066 876 2544 2727 C 191 87.43 1200 reject_low 7 ALIGNMENT 0 YS2-9f01.q1k vc_4 62 875 126 125 F 814 0.00 1200 reject_low 8 ALIGNMENT 97 YS2-9f01.q1k vc_1 876 1066 2531 2714 F 191 87.43 1200 reject_low 2 ALIGNMENT 0 YS2-9f01.q1k vc_7 62 838 13525 13524 F 777 0.00 1200 reject_low 15 ALIGNMENT 0 YS2-9f01.q1k vc_4 875 62 5813 5812 C 814 0.00 1200 reject_low 5 ALIGNMENT 0 YS2-9f01.q1k vc_5 62 875 2398 2397 F 814 0.00 1200 reject_low 6 ALIGNMENT 41 YS2-9f01.q1k vc_2 876 836 2105 2145 C 41 100.00 1200 reject_low 12 ALIGNMENT 0 YS2-9f01.q1k vc_2 62 875 2164 2163 F 814 0.00 1200 reject_low 3 ALIGNMENT 97 YS2-9f01.q1k vc_2 876 1066 2164 2347 F 191 87.43 1200 reject_low 3 ALIGNMENT 0 YS2-9f01.q1k vc_1 62 875 2531 2530 F 814 0.00 1200 reject_low 2 ALIGNMENT 1000 YS2-9f02.p1k chr11 32 1174 292677 293825 F 1143 96.59 1180 accept 0 ALIGNMENT 926 YS2-9f02.q1k chr11 1155 35 296286 297421 C 1121 95.45 1156 accept 0 ALIGNMENT 980 YS2-9f03.p1k chr10 1175 36 302560 303694 C 1140 96.32 1206 accept 0 ALIGNMENT 898 YS2-9f03.q1k chr10 38 1154 299333 300440 F 1117 95.52 1208 accept 0 ALIGNMENT 222 YS2-9f04.q1k vc_2 1 281 2322 2601 F 281 93.59 660 reject_vc 5 ALIGNMENT 62 YS2-9f04.q1k vc_4 310 524 1878 2077 F 215 81.86 660 reject_vc 8 ALIGNMENT 286 YS2-9f04.q1k vc_5 1 524 2556 3061 F 524 87.21 660 reject_vc 1 ALIGNMENT 222 YS2-9f04.q1k vc_3 1 281 2689 2968 F 281 93.59 660 reject_vc 6 ALIGNMENT 168 YS2-9f04.q1k vc_7 281 53 4945 5172 C 229 91.70 660|0,1 reject_vc 7 ALIGNMENT 0 YS2-9f04.q1k vc_7 314 282 4692 4944 C 33 0.00 660 reject_vc 7 ALIGNMENT 0 YS2-9f04.q1k vc_7 53 54 5172 6360 C 0 0.00 660 reject_vc 7 ALIGNMENT 311 YS2-9f04.p1k chr11 31 373 379442 379785 F 343 99.13 391 accept 0 ALIGNMENT 222 YS2-9f04.q1k vc_1 1 281 2689 2968 F 281 93.59 660 reject_vc 4 ALIGNMENT 0 YS2-9f04.p1k chr11 374 391 379785 379784 F 18 0.00 391 accept 0 ALIGNMENT 286 YS2-9f04.q1k vc_7 524 1 2064 2569 C 524 87.60 660 reject_vc 2 ALIGNMENT 256 YS2-9f04.q1k vc_4 431 1 5232 5654 C 431 88.63 660 reject_vc 3 ALIGNMENT 40 YS2-9f04.q1k vc_7 431 315 4583 4691 C 117 82.91 660 reject_vc 7 ALIGNMENT 51 YS2-9f04.q1k vc_7 54 3 6360 6411 C 52 100.00 660|1,0 reject_vc 7 ALIGNMENT 1045 YS2-9f05.p1k chr14 1213 34 476550 477740 C 1180 96.53 1232 accept 0 ALIGNMENT 830 YS2-9f05.q1k chr14 39 985 473237 474198 F 947 97.15 1189 accept 0 ALIGNMENT 351 YS2-9f07.p1k vc_5 510 1 4169 4669 C 510 90.98 722 reject_vc 0 ALIGNMENT 348 YS2-9f07.p1k vc_1 502 1 1256 1749 C 502 91.04 722 reject_vc 2 ALIGNMENT 348 YS2-9f07.p1k vc_3 502 1 1256 1749 C 502 91.04 722 reject_vc 4 ALIGNMENT 342 YS2-9f07.p1k vc_7 1 502 456 949 F 502 90.64 722 reject_vc 5 ALIGNMENT 351 YS2-9f07.p1k vc_6 1 510 3712 4212 F 510 90.98 722 reject_vc 1 ALIGNMENT 342 YS2-9f07.p1k vc_7 1 502 13918 14411 F 502 90.64 722 reject_vc 6 ALIGNMENT 348 YS2-9f07.p1k vc_2 502 1 1256 1749 C 502 91.04 722 reject_vc 3 ALIGNMENT 985 YS2-9f08.p1k chr04 1196 29 49848 51026 C 1168 95.89 1212 accept 0 ALIGNMENT 984 YS2-9f08.q1k chr04 42 1204 46262 47431 F 1163 95.53 1216 accept 0 ALIGNMENT 928 YS2-9f09.q1k chr02 1171 32 564416 565551 C 1140 95.35 1179 accept 0 ALIGNMENT 896 YS2-9f09.p1k chr02 33 1158 559288 560435 F 1126 95.12 1159 accept 0 ALIGNMENT 1000 YS2-9f10.p1k chr16 1180 31 225679 226830 C 1150 96.35 1180 accept 0 ALIGNMENT 981 YS2-9f10.q1k chr16 42 1139 222290 223377 F 1098 98.09 1208 accept 0 ALIGNMENT 0 YS2-9f12.q1k vc_1 214 62 2513 2512 C 153 0.00 255 reject_low 2 ALIGNMENT 0 YS2-9f12.q1k vc_7 62 217 13525 13524 F 156 0.00 255 reject_low 6 ALIGNMENT 174 YS2-9f12.q1k chr07 38 216 739437 739614 F 179 99.44 255 accept_chi 1 ALIGNMENT 40 YS2-9f12.q1k vc_5 255 213 5025 5067 C 43 97.67 255 reject_low 5 ALIGNMENT 0 YS2-9f12.q1k vc_3 214 62 2513 2512 C 153 0.00 255 reject_low 3 ALIGNMENT 37 YS2-9f12.q1k vc_5 252 213 1 40 C 40 97.50 255 reject_low 7 ALIGNMENT 41 YS2-9f12.q1k vc_1 255 215 2472 2512 C 41 100.00 255 reject_low 2 ALIGNMENT 0 YS2-9f12.q1k vc_5 212 62 41 40 C 151 0.00 255 reject_low 7 ALIGNMENT 0 YS2-9f12.q1k chr07 217 255 739614 739613 F 39 0.00 255 accept_chi 1 ALIGNMENT 0 YS2-9f12.q1k vc_5 212 62 5068 5067 C 151 0.00 255 reject_low 5 ALIGNMENT 41 YS2-9f12.q1k vc_3 255 215 2472 2512 C 41 100.00 255 reject_low 3 ALIGNMENT 0 YS2-9f12.p1k chr07 223 207 739438 739437 C 17 0.00 223 accept_chi 0 ALIGNMENT 0 YS2-9f12.q1k vc_4 62 214 5831 5830 F 153 0.00 255 reject_low 4 ALIGNMENT 38 YS2-9f12.q1k vc_7 218 255 13525 13562 F 38 100.00 255 reject_low 6 ALIGNMENT 41 YS2-9f12.q1k vc_4 215 255 5831 5871 F 41 100.00 255 reject_low 4 ALIGNMENT 178 YS2-9f12.p1k chr07 206 29 739437 739614 C 178 100.00 223 accept_chi 0 ALIGNMENT 559 YS2-9f13.p1k chr14 221 1022 287945 288732 F 802 91.52 1345 accept 0 ALIGNMENT 41 YS2-9f14.q1k vc_4 261 301 5831 5871 F 41 100.00 301 reject_low 2 ALIGNMENT 169 YS2-9f14.p1k chrm 27 253 48275 48501 F 227 100.00 272 accept_chi 0 ALIGNMENT 165 YS2-9f14.q1k chrm 260 33 48275 48501 C 228 99.56 301 accept_chi 1 ALIGNMENT 0 YS2-9f14.q1k vc_4 62 260 5831 5830 F 199 0.00 301 reject_low 2 ALIGNMENT 38 YS2-9f14.q1k vc_7 264 301 13525 13562 F 38 100.00 301 reject_low 4 ALIGNMENT 0 YS2-9f14.q1k chrm 301 261 48276 48275 C 41 0.00 301 accept_chi 1 ALIGNMENT 38 YS2-9f14.q1k vc_7 264 301 63 100 F 38 100.00 301 reject_low 3 ALIGNMENT 0 YS2-9f14.q1k vc_7 62 263 63 62 F 202 0.00 301 reject_low 3 ALIGNMENT 0 YS2-9f14.p1k chrm 254 272 48501 48500 F 19 0.00 272 accept_chi 0 ALIGNMENT 0 YS2-9f14.q1k vc_7 62 263 13525 13524 F 202 0.00 301 reject_low 4 ALIGNMENT 973 YS2-9f15.p1k chr14 26 1174 287832 288980 F 1149 95.56 1181 accept 0 ALIGNMENT 960 YS2-9f15.q1k chr14 1160 40 291514 292646 C 1121 96.07 1165 accept 0 ALIGNMENT 39 YS2-9f16.q1k vc_5 211 173 5025 5063 C 39 100.00 211 reject_low 4 ALIGNMENT 41 YS2-9f16.q1k vc_4 171 211 5831 5871 F 41 100.00 211 reject_low 3 ALIGNMENT 0 YS2-9f16.q1k vc_4 62 170 5831 5830 F 109 0.00 211 reject_low 3 ALIGNMENT 41 YS2-9f16.q1k vc_1 211 171 2472 2512 C 41 100.00 211 reject_low 1 ALIGNMENT 0 YS2-9f16.q1k vc_5 172 62 37 36 C 111 0.00 211 reject_low 6 ALIGNMENT 0 YS2-9f16.q1k vc_3 170 62 2513 2512 C 109 0.00 211 reject_low 2 ALIGNMENT 120 YS2-9f16.q1k chr07 36 170 933865 934000 F 135 98.52 211 accept 0 ALIGNMENT 36 YS2-9f16.q1k vc_5 208 173 1 36 C 36 100.00 211 reject_low 6 ALIGNMENT 0 YS2-9f16.q1k chr07 171 211 934000 933999 F 41 0.00 211 accept 0 ALIGNMENT 38 YS2-9f16.q1k vc_7 174 211 13525 13562 F 38 100.00 211 reject_low 5 ALIGNMENT 0 YS2-9f16.q1k vc_5 172 62 5064 5063 C 111 0.00 211 reject_low 4 ALIGNMENT 0 YS2-9f16.q1k vc_1 170 62 2513 2512 C 109 0.00 211 reject_low 1 ALIGNMENT 0 YS2-9f16.q1k vc_7 62 173 13525 13524 F 112 0.00 211 reject_low 5 ALIGNMENT 41 YS2-9f16.q1k vc_3 211 171 2472 2512 C 41 100.00 211 reject_low 2 ALIGNMENT 0 YS2-9f18.q1k vc_6 298 772 6535 6534 F 475 0.00 1188 reject_low 3 ALIGNMENT 254 YS2-9f18.q1k vc_6 39 297 6277 6535 F 259 100.00 1188 reject_low 3 ALIGNMENT 0 YS2-9f18.q1k scplasm1 492 62 757 756 C 431 0.00 1188 reject_low 4 ALIGNMENT 0 YS2-9f18.q1k scplasm1 62 492 3897 3896 F 431 0.00 1188 reject_low 5 ALIGNMENT 619 YS2-9f18.q1k scplasm1 39 710 266 936 F 672 97.92 1188 manual 2 ALIGNMENT 0 YS2-9f18.q1k scplasm1 530 772 3933 3932 F 243 0.00 1188 reject_low 5 ALIGNMENT 0 YS2-9f18.q1k scplasm1 711 772 936 935 F 62 0.00 1188 manual 2 ALIGNMENT 824 YS2-9f18.p1k chr03 985 29 38792 39752 C 957 95.82 1148 accept_chi 0 ALIGNMENT 0 YS2-9f18.q1k scplasm1 113 62 4313 4312 C 52 0.00 1188 manual 1 ALIGNMENT 22 YS2-9f18.q1k scplasm1 493 529 3897 3933 F 37 86.49 1188 reject_low 5 ALIGNMENT 0 YS2-9f18.q1k scplasm1 772 530 721 720 C 243 0.00 1188 reject_low 4 ALIGNMENT 547 YS2-9f18.q1k scplasm1 1044 114 3373 4312 C 931 87.11 1188 manual 1 ALIGNMENT 22 YS2-9f18.q1k scplasm1 529 493 720 756 C 37 86.49 1188 reject_low 4 ALIGNMENT 993 YS2-9f19.q1k chr14 49 1195 29573 30711 F 1147 96.08 1195 accept 0 ALIGNMENT 974 YS2-9f19.p1k chr14 1107 18 33723 34810 C 1090 96.97 1165 accept 0 ALIGNMENT 945 YS2-9f21.p1k chr15 26 1147 391080 392205 F 1122 95.10 1150 accept 0 ALIGNMENT 919 YS2-9f21.q1k chr15 1101 41 393959 395005 C 1061 96.80 1184 accept 0 ALIGNMENT 41 YS2-9f23.q1k vc_2 244 204 2105 2145 C 41 100.00 244 reject_low 3 ALIGNMENT 41 YS2-9f23.q1k vc_3 244 204 2472 2512 C 41 100.00 244 reject_low 4 ALIGNMENT 0 YS2-9f23.q1k vc_5 205 62 37 36 C 144 0.00 244 reject_low 8 ALIGNMENT 0 YS2-9f23.q1k vc_2 203 62 2146 2145 C 142 0.00 244 reject_low 3 ALIGNMENT 41 YS2-9f23.q1k vc_1 244 204 2472 2512 C 41 100.00 244 reject_low 2 ALIGNMENT 0 YS2-9f23.q1k vc_5 205 62 5064 5063 C 144 0.00 244 reject_low 6 ALIGNMENT 38 YS2-9f23.q1k vc_7 207 244 13525 13562 F 38 100.00 244 reject_low 7 ALIGNMENT 41 YS2-9f23.q1k vc_4 204 244 5831 5871 F 41 100.00 244 reject_low 5 ALIGNMENT 0 YS2-9f23.q1k vc_3 203 62 2513 2512 C 142 0.00 244 reject_low 4 ALIGNMENT 0 YS2-9f23.p1k chr15 196 214 657186 657185 F 19 0.00 214 accept_chi 0 ALIGNMENT 39 YS2-9f23.q1k vc_5 244 206 5025 5063 C 39 100.00 244 reject_low 6 ALIGNMENT 160 YS2-9f23.q1k chr15 203 40 657023 657186 C 164 100.00 244 accept_chi 1 ALIGNMENT 0 YS2-9f23.q1k vc_4 62 203 5831 5830 F 142 0.00 244 reject_low 5 ALIGNMENT 0 YS2-9f23.q1k chr15 244 204 657024 657023 C 41 0.00 244 accept_chi 1 ALIGNMENT 0 YS2-9f23.q1k vc_7 62 206 13525 13524 F 145 0.00 244 reject_low 7 ALIGNMENT 36 YS2-9f23.q1k vc_5 241 206 1 36 C 36 100.00 244 reject_low 8 ALIGNMENT 160 YS2-9f23.p1k chr15 32 195 657023 657186 F 164 100.00 214 accept_chi 0 ALIGNMENT 0 YS2-9f23.q1k vc_1 203 62 2513 2512 C 142 0.00 244 reject_low 2 ALIGNMENT 155 YS2-9g01.p1k vc_5 363 1 4441 4795 C 363 83.47 533 reject_vc 4 ALIGNMENT 0 YS2-9g01.q1k vc_7 62 464 13525 13524 F 403 0.00 502 reject_low 15 ALIGNMENT 155 YS2-9g01.p1k vc_7 1 363 330 684 F 363 82.64 533 reject_vc 5 ALIGNMENT 42 YS2-9g01.q1k vc_1 502 461 2472 2513 C 42 100.00 502 reject_low 9 ALIGNMENT 155 YS2-9g01.p1k vc_2 363 1 1521 1875 C 363 83.47 533 reject_vc 2 ALIGNMENT 25 YS2-9g01.q1k chr15 355 312 43876 43919 C 44 86.36 502 reject_low 13 ALIGNMENT 0 YS2-9g01.q1k chr15 502 356 43877 43876 C 147 0.00 502 reject_low 13 ALIGNMENT 42 YS2-9g01.q1k vc_4 461 502 5830 5871 F 42 100.00 502 reject_low 12 ALIGNMENT 0 YS2-9g01.q1k vc_4 62 460 5830 5829 F 399 0.00 502 reject_low 12 ALIGNMENT 42 YS2-9g01.q1k vc_3 502 461 2472 2513 C 42 100.00 502 reject_low 11 ALIGNMENT 0 YS2-9g01.q1k chr07 502 462 424061 424060 C 41 0.00 502 accept 0 ALIGNMENT 36 YS2-9g01.q1k vc_5 499 464 1 36 C 36 100.00 502 reject_low 16 ALIGNMENT 0 YS2-9g01.q1k vc_1 460 62 2514 2513 C 399 0.00 502 reject_low 9 ALIGNMENT 42 YS2-9g01.q1k vc_2 502 461 2105 2146 C 42 100.00 502 reject_low 10 ALIGNMENT 38 YS2-9g01.q1k vc_7 465 502 13525 13562 F 38 100.00 502 reject_low 15 ALIGNMENT 0 YS2-9g01.q1k vc_3 460 62 2514 2513 C 399 0.00 502 reject_low 11 ALIGNMENT 0 YS2-9g01.q1k chr15 311 62 43920 43919 C 250 0.00 502 reject_low 13 ALIGNMENT 155 YS2-9g01.p1k vc_3 363 1 1521 1875 C 363 83.47 533 reject_vc 3 ALIGNMENT 149 YS2-9g01.p1k vc_6 1 285 3586 3867 F 285 85.26 533 reject_vc 7 ALIGNMENT 155 YS2-9g01.p1k vc_7 1 363 13792 14146 F 363 82.64 533 reject_vc 6 ALIGNMENT 92 YS2-9g01.p1k vc_4 1 124 6101 6223 F 124 91.94 533 reject_vc 8 ALIGNMENT 0 YS2-9g01.q1k vc_2 460 62 2147 2146 C 399 0.00 502 reject_low 10 ALIGNMENT 0 YS2-9g01.q1k vc_5 463 62 37 36 C 402 0.00 502 reject_low 16 ALIGNMENT 415 YS2-9g01.q1k chr07 461 39 424060 424481 C 423 99.76 502 accept 0 ALIGNMENT 155 YS2-9g01.p1k vc_1 363 1 1521 1875 C 363 83.47 533 reject_vc 1 ALIGNMENT 0 YS2-9g01.q1k vc_5 463 62 5064 5063 C 402 0.00 502 reject_low 14 ALIGNMENT 39 YS2-9g01.q1k vc_5 502 464 5025 5063 C 39 100.00 502 reject_low 14 ALIGNMENT 806 YS2-9g02.q1k chr06 1115 51 237375 238459 C 1065 93.24 1137 accept 0 ALIGNMENT 399 YS2-9g02.p1k chr06 34 513 232002 232470 F 480 96.67 1224 accept 0 ALIGNMENT 956 YS2-9g03.q1k chr05 1105 38 65747 66817 C 1068 96.82 1296 accept 0 ALIGNMENT 833 YS2-9g03.p1k chr05 40 1061 60866 61914 F 1022 95.21 1181 accept 0 ALIGNMENT 0 YS2-9g04.q1k chr07 454 415 713487 713486 C 40 0.00 454 accept_chi 1 ALIGNMENT 36 YS2-9g04.q1k vc_5 451 416 1 36 C 36 100.00 454 reject_low 7 ALIGNMENT 0 YS2-9g04.q1k vc_1 414 62 2512 2511 C 353 0.00 454 reject_low 2 ALIGNMENT 0 YS2-9g04.q1k vc_3 414 62 2512 2511 C 353 0.00 454 reject_low 3 ALIGNMENT 39 YS2-9g04.q1k vc_5 454 416 5025 5063 C 39 100.00 454 reject_low 5 ALIGNMENT 0 YS2-9g04.q1k vc_5 415 62 37 36 C 354 0.00 454 reject_low 7 ALIGNMENT 40 YS2-9g04.q1k vc_1 454 415 2472 2511 C 40 100.00 454 reject_low 2 ALIGNMENT 0 YS2-9g04.q1k vc_5 415 62 5064 5063 C 354 0.00 454 reject_low 5 ALIGNMENT 361 YS2-9g04.q1k chr07 414 30 713486 713870 C 385 98.44 454 accept_chi 1 ALIGNMENT 0 YS2-9g04.q1k vc_7 62 416 13525 13524 F 355 0.00 454 reject_low 6 ALIGNMENT 38 YS2-9g04.q1k vc_7 417 454 13525 13562 F 38 100.00 454 reject_low 6 ALIGNMENT 361 YS2-9g04.p1k chr07 28 412 713486 713870 F 385 98.44 431 accept_chi 0 ALIGNMENT 0 YS2-9g04.p1k chr07 413 431 713870 713869 F 19 0.00 431 accept_chi 0 ALIGNMENT 0 YS2-9g04.q1k vc_4 62 414 5832 5831 F 353 0.00 454 reject_low 4 ALIGNMENT 40 YS2-9g04.q1k vc_4 415 454 5832 5871 F 40 100.00 454 reject_low 4 ALIGNMENT 40 YS2-9g04.q1k vc_3 454 415 2472 2511 C 40 100.00 454 reject_low 3 ALIGNMENT 36 YS2-9g05.q1k vc_5 289 254 1 36 C 36 100.00 292 reject_low 7 ALIGNMENT 0 YS2-9g05.q1k chr04 292 253 1513059 1513058 C 40 0.00 292 ambiguous_tel 1 ALIGNMENT 199 YS2-9g05.q1k chr04 252 41 1513058 1513267 C 212 99.06 292 ambiguous_tel 1 ALIGNMENT 0 YS2-9g05.q1k vc_7 62 254 13525 13524 F 193 0.00 292 reject_low 6 ALIGNMENT 0 YS2-9g05.q1k vc_5 253 62 37 36 C 192 0.00 292 reject_low 7 ALIGNMENT 0 YS2-9g05.q1k vc_3 251 62 2513 2512 C 190 0.00 292 reject_low 3 ALIGNMENT 0 YS2-9g05.q1k vc_1 251 62 2513 2512 C 190 0.00 292 reject_low 2 ALIGNMENT 41 YS2-9g05.q1k vc_1 292 252 2472 2512 C 41 100.00 292 reject_low 2 ALIGNMENT 0 YS2-9g05.p1k chr04 251 269 1513280 1513279 F 19 0.00 269 ambiguous_tel 0 ALIGNMENT 0 YS2-9g05.q1k vc_4 62 251 5831 5830 F 190 0.00 292 reject_low 4 ALIGNMENT 39 YS2-9g05.q1k vc_5 292 254 5025 5063 C 39 100.00 292 reject_low 5 ALIGNMENT 38 YS2-9g05.q1k vc_7 255 292 13525 13562 F 38 100.00 292 reject_low 6 ALIGNMENT 41 YS2-9g05.q1k vc_4 252 292 5831 5871 F 41 100.00 292 reject_low 4 ALIGNMENT 218 YS2-9g05.p1k chr04 30 250 1513060 1513280 F 221 100.00 269 ambiguous_tel 0 ALIGNMENT 41 YS2-9g05.q1k vc_3 292 252 2472 2512 C 41 100.00 292 reject_low 3 ALIGNMENT 0 YS2-9g05.q1k vc_5 253 62 5064 5063 C 192 0.00 292 reject_low 5 ALIGNMENT 37 YS2-9g06.q1k vc_5 280 241 1 40 C 40 97.50 283 reject_low 9 ALIGNMENT 0 YS2-9g06.q1k vc_1 242 62 2513 2512 C 181 0.00 283 reject_low 4 ALIGNMENT 0 YS2-9g06.q1k vc_5 240 62 41 40 C 179 0.00 283 reject_low 9 ALIGNMENT 38 YS2-9g06.q1k vc_7 246 283 13525 13562 F 38 100.00 283 reject_low 8 ALIGNMENT 0 YS2-9g06.q1k vc_4 62 242 5831 5830 F 181 0.00 283 reject_low 6 ALIGNMENT 0 YS2-9g06.q1k vc_7 62 245 13525 13524 F 184 0.00 283 reject_low 8 ALIGNMENT 0 YS2-9g06.q1k vc_5 240 62 5068 5067 C 179 0.00 283 reject_low 7 ALIGNMENT 41 YS2-9g06.q1k vc_1 283 243 2472 2512 C 41 100.00 283 reject_low 4 ALIGNMENT 159 YS2-9g06.q1k chr16 242 75 786899 787066 C 168 100.00 283 accept_chi 1 ALIGNMENT 33 YS2-9g06.q1k chr07 75 33 879161 879204 C 43 95.35 283 reject_low 3 ALIGNMENT 40 YS2-9g06.q1k vc_5 283 241 5025 5067 C 43 97.67 283 reject_low 7 ALIGNMENT 40 YS2-9g06.p1k chr07 199 245 879161 879207 F 47 97.87 263 reject_low 2 ALIGNMENT 0 YS2-9g06.p1k chr07 246 263 879207 879206 F 18 0.00 263 reject_low 2 ALIGNMENT 41 YS2-9g06.q1k vc_3 283 243 2472 2512 C 41 100.00 283 reject_low 5 ALIGNMENT 0 YS2-9g06.q1k chr07 283 76 879162 879161 C 208 0.00 283 reject_low 3 ALIGNMENT 0 YS2-9g06.q1k vc_3 242 62 2513 2512 C 181 0.00 283 reject_low 5 ALIGNMENT 41 YS2-9g06.q1k vc_4 243 283 5831 5871 F 41 100.00 283 reject_low 6 ALIGNMENT 0 YS2-9g06.p1k chr07 62 198 879161 879160 F 137 0.00 263 reject_low 2 ALIGNMENT 0 YS2-9g06.q1k chr16 283 243 786900 786899 C 41 0.00 283 accept_chi 1 ALIGNMENT 0 YS2-9g06.p1k chr16 200 263 787066 787065 F 64 0.00 263 accept_chi 0 ALIGNMENT 159 YS2-9g06.p1k chr16 32 199 786899 787066 F 168 100.00 263 accept_chi 0 ALIGNMENT 990 YS2-9g07.q1k chr02 32 1218 791653 792846 F 1187 96.21 1290 accept 0 ALIGNMENT 952 YS2-9g08.p1k chr02 35 1136 313794 314908 F 1102 96.55 1220 accept 0 ALIGNMENT 937 YS2-9g08.q1k chr02 1166 51 316050 317161 C 1116 96.51 1251 accept 0 ALIGNMENT 918 YS2-9g09.q1k chr05 38 1213 51542 52734 F 1176 94.05 1340 accept 0 ALIGNMENT 970 YS2-9g09.p1k chr05 1147 43 55292 56410 C 1105 96.74 1218 accept 0 ALIGNMENT 327 YS2-9g10.p1k chr12 855 56 456698 457485 C 800 82.12 1336 accept 0 ALIGNMENT 327 YS2-9g10.p1k chr12 855 56 465835 466622 C 800 82.12 1336 accept 1 ALIGNMENT 42 YS2-9g12.q1k vc_2 610 568 2105 2147 C 43 100.00 610 reject_low 3 ALIGNMENT 0 YS2-9g12.q1k chr15 571 610 424501 424500 F 40 0.00 610 accept_chi 1 ALIGNMENT 508 YS2-9g12.p1k chr15 566 32 423967 424501 C 535 98.69 584 accept_chi 0 ALIGNMENT 0 YS2-9g12.q1k vc_7 62 572 13525 13524 F 511 0.00 610 reject_low 7 ALIGNMENT 0 YS2-9g12.q1k vc_3 567 62 2515 2514 C 506 0.00 610 reject_low 4 ALIGNMENT 42 YS2-9g12.q1k vc_4 568 610 5829 5871 F 43 100.00 610 reject_low 5 ALIGNMENT 38 YS2-9g12.q1k vc_7 573 610 13525 13562 F 38 100.00 610 reject_low 7 ALIGNMENT 42 YS2-9g12.q1k vc_1 610 568 2472 2514 C 43 100.00 610 reject_low 2 ALIGNMENT 0 YS2-9g12.q1k vc_2 567 62 2148 2147 C 506 0.00 610 reject_low 3 ALIGNMENT 508 YS2-9g12.q1k chr15 36 570 423967 424501 F 535 98.69 610 accept_chi 1 ALIGNMENT 36 YS2-9g12.q1k vc_5 607 572 1 36 C 36 100.00 610 reject_low 8 ALIGNMENT 0 YS2-9g12.q1k vc_1 567 62 2515 2514 C 506 0.00 610 reject_low 2 ALIGNMENT 0 YS2-9g12.p1k chr15 584 567 423968 423967 C 18 0.00 584 accept_chi 0 ALIGNMENT 42 YS2-9g12.q1k vc_3 610 568 2472 2514 C 43 100.00 610 reject_low 4 ALIGNMENT 0 YS2-9g12.q1k vc_4 62 567 5829 5828 F 506 0.00 610 reject_low 5 ALIGNMENT 0 YS2-9g12.q1k vc_5 571 62 5064 5063 C 510 0.00 610 reject_low 6 ALIGNMENT 0 YS2-9g12.q1k vc_5 571 62 37 36 C 510 0.00 610 reject_low 8 ALIGNMENT 39 YS2-9g12.q1k vc_5 610 572 5025 5063 C 39 100.00 610 reject_low 6 ALIGNMENT 994 YS2-9g13.p1k chr04 32 1202 855163 856331 F 1171 95.56 1204 accept 0 ALIGNMENT 1002 YS2-9g13.q1k chr04 1230 48 858887 860084 C 1183 95.86 1389 accept 0 ALIGNMENT 0 YS2-9g14.q1k chr12 220 772 5326 5325 F 553 0.00 1171 reject_low 2 ALIGNMENT 0 YS2-9g14.q1k chr16 91 83 943682 943707 C 9 0.00 1171 reject_low 20 ALIGNMENT 0 YS2-9g14.q1k chr16 220 231 6192 6730 F 12 0.00 1171 reject_low 4 ALIGNMENT 48 YS2-9g14.q1k chr12 92 139 4495 4542 F 48 100.00 1171 reject_low 2 ALIGNMENT 37 YS2-9g14.q1k chr07 82 38 1085550 1085595 C 45 95.56 1171 reject_low 8 ALIGNMENT 0 YS2-9g14.q1k chr04 91 83 1526618 1526643 C 9 0.00 1171 reject_low 17 ALIGNMENT 47 YS2-9g14.q1k chr15 138 92 1085736 1085782 C 47 100.00 1171 reject_low 19 ALIGNMENT 33 YS2-9g14.q1k chr12 173 219 5280 5326 F 47 91.49 1171 reject_low 2 ALIGNMENT 0 YS2-9g14.q1k chr13 83 91 4345 4370 F 9 0.00 1171 reject_low 15 ALIGNMENT 37 YS2-9g14.q1k chr08 38 82 4155 4200 F 45 95.56 1171 reject_low 9 ALIGNMENT 0 YS2-9g14.q1k chr12 772 220 1071987 1071986 C 553 0.00 1171 reject_low 3 ALIGNMENT 0 YS2-9g14.q1k chr12 172 139 1072033 1072771 C 34 0.00 1171 reject_low 3 ALIGNMENT 48 YS2-9g14.q1k chr14 92 139 5445 5492 F 48 100.00 1171 reject_low 16 ALIGNMENT 0 YS2-9g14.q1k chr07 772 140 1085477 1085476 C 633 0.00 1171 reject_low 8 ALIGNMENT 0 YS2-9g14.q1k chr15 772 139 1085737 1085736 C 634 0.00 1171 reject_low 19 ALIGNMENT 37 YS2-9g14.q1k chr02 38 82 4624 4669 F 45 95.56 1171 reject_low 7 ALIGNMENT 48 YS2-9g14.q1k chr10 92 139 5817 5864 F 48 100.00 1171 reject_low 12 ALIGNMENT 95 YS2-9g14.q1k chr05 38 139 5345 5447 F 102 98.04 1171 ambiguous_tel 0 ALIGNMENT 0 YS2-9g14.q1k chr12 140 772 10077 10076 F 633 0.00 1171 reject_low 13 ALIGNMENT 37 YS2-9g14.q1k chr16 82 38 943708 943753 C 45 95.56 1171 reject_low 20 ALIGNMENT 37 YS2-9g14.q1k chr12 82 38 1072845 1072890 C 45 95.56 1171 reject_low 3 ALIGNMENT 37 YS2-9g14.q1k chr04 82 38 1526644 1526689 C 45 95.56 1171 reject_low 17 ALIGNMENT 0 YS2-9g14.q1k chr06 83 91 3507 3532 F 9 0.00 1171 reject_low 18 ALIGNMENT 37 YS2-9g14.q1k chr06 38 82 3461 3506 F 45 95.56 1171 reject_low 18 ALIGNMENT 37 YS2-9g14.q1k chr08 82 38 558162 558207 C 45 95.56 1171 reject_low 10 ALIGNMENT 0 YS2-9g14.q1k chr10 83 91 5791 5816 F 9 0.00 1171 reject_low 12 ALIGNMENT 0 YS2-9g14.q1k chr12 140 172 4543 5279 F 33 0.00 1171 reject_low 2 ALIGNMENT 0 YS2-9g14.q1k chr11 231 62 666049 666048 C 170 0.00 1171 reject_low 6 ALIGNMENT 0 YS2-9g14.q1k chr05 772 140 571417 571416 C 633 0.00 1171 ambiguous_tel 1 ALIGNMENT 37 YS2-9g14.q1k chr10 38 82 5745 5790 F 45 95.56 1171 reject_low 12 ALIGNMENT 0 YS2-9g14.q1k chr13 140 772 4418 4417 F 633 0.00 1171 reject_low 15 ALIGNMENT 48 YS2-9g14.q1k chr12 139 92 1066219 1066266 C 48 100.00 1171 reject_low 14 ALIGNMENT 37 YS2-9g14.q1k chr09 38 82 5762 5807 F 45 95.56 1171 reject_low 11 ALIGNMENT 0 YS2-9g14.q1k chr10 140 772 5864 5863 F 633 0.00 1171 reject_low 12 ALIGNMENT 47 YS2-9g14.q1k chr06 92 138 3533 3579 F 47 100.00 1171 reject_low 18 ALIGNMENT 0 YS2-9g14.q1k chr12 83 91 4469 4494 F 9 0.00 1171 reject_low 2 ALIGNMENT 0 YS2-9g14.q1k chr08 91 83 558136 558161 C 9 0.00 1171 reject_low 10 ALIGNMENT 48 YS2-9g14.q1k chr13 92 139 4371 4418 F 48 100.00 1171 reject_low 15 ALIGNMENT 48 YS2-9g14.q1k chr02 92 139 4696 4743 F 48 100.00 1171 reject_low 7 ALIGNMENT 0 YS2-9g14.q1k chr16 772 139 943636 943635 C 634 0.00 1171 reject_low 20 ALIGNMENT 37 YS2-9g14.q1k chr12 82 38 1066293 1066338 C 45 95.56 1171 reject_low 14 ALIGNMENT 0 YS2-9g14.q1k chr02 140 772 4743 4742 F 633 0.00 1171 reject_low 7 ALIGNMENT 0 YS2-9g14.q1k chr16 140 172 5402 6144 F 33 0.00 1171 reject_low 4 ALIGNMENT 0 YS2-9g14.q1k chr08 772 140 558089 558088 C 633 0.00 1171 reject_low 10 ALIGNMENT 37 YS2-9g14.q1k chr12 38 82 4423 4468 F 45 95.56 1171 reject_low 2,13 ALIGNMENT 37 YS2-9g14.q1k chr16 38 82 5282 5327 F 45 95.56 1171 reject_low 4 ALIGNMENT 0 YS2-9g14.q1k chr14 140 772 5492 5491 F 633 0.00 1171 reject_low 16 ALIGNMENT 0 YS2-9g14.q1k chr06 139 772 3579 3578 F 634 0.00 1171 reject_low 18 ALIGNMENT 37 YS2-9g14.q1k chr15 82 38 1085809 1085854 C 45 95.56 1171 reject_low 19 ALIGNMENT 0 YS2-9g14.q1k chr05 140 772 5447 5446 F 633 0.00 1171 ambiguous_tel 0 ALIGNMENT 0 YS2-9g14.q1k chr09 140 772 5881 5880 F 633 0.00 1171 reject_low 11 ALIGNMENT 37 YS2-9g14.q1k chr13 38 82 4299 4344 F 45 95.56 1171 reject_low 15 ALIGNMENT 0 YS2-9g14.q1k chr14 83 91 5419 5444 F 9 0.00 1171 reject_low 16 ALIGNMENT 0 YS2-9g14.q1k chr09 83 91 5808 5833 F 9 0.00 1171 reject_low 11 ALIGNMENT 0 YS2-9g14.q1k chr16 83 91 5328 5353 F 9 0.00 1171 reject_low 4 ALIGNMENT 48 YS2-9g14.q1k chr07 139 92 1085476 1085523 C 48 100.00 1171 reject_low 8 ALIGNMENT 0 YS2-9g14.q1k chr16 283 772 6781 6780 F 490 0.00 1171 reject_low 4 ALIGNMENT 48 YS2-9g14.q1k chr08 92 139 4227 4274 F 48 100.00 1171 reject_low 9 ALIGNMENT 0 YS2-9g14.q1k chr08 83 91 4201 4226 F 9 0.00 1171 reject_low 9 ALIGNMENT 0 YS2-9g14.q1k chr12 91 83 1066267 1066292 C 9 0.00 1171 reject_low 14 ALIGNMENT 0 YS2-9g14.q1k chr04 772 139 1526572 1526571 C 634 0.00 1171 reject_low 17 ALIGNMENT 33 YS2-9g14.q1k chr12 219 173 1071986 1072032 C 47 91.49 1171 reject_low 3 ALIGNMENT 47 YS2-9g14.q1k chr16 138 92 943635 943681 C 47 100.00 1171 reject_low 20 ALIGNMENT 37 YS2-9g14.q1k chr12 38 82 9958 10003 F 45 95.56 1171 reject_low 5 ALIGNMENT 31 YS2-9g14.q1k chr16 232 282 6731 6781 F 51 88.24 1171 reject_low 4 ALIGNMENT 0 YS2-9g14.q1k chr15 91 83 1085783 1085808 C 9 0.00 1171 reject_low 19 ALIGNMENT 0 YS2-9g14.q1k chr12 83 91 4469 10029 F 9 0.00 1171 reject_low 13 ALIGNMENT 48 YS2-9g14.q1k chr16 92 139 5354 5401 F 48 100.00 1171 reject_low 4 ALIGNMENT 0 YS2-9g14.q1k chr12 772 140 1066220 1066219 C 633 0.00 1171 reject_low 14 ALIGNMENT 0 YS2-9g14.q1k chr02 83 91 4670 4695 F 9 0.00 1171 reject_low 7 ALIGNMENT 48 YS2-9g14.q1k chr08 139 92 558088 558135 C 48 100.00 1171 reject_low 10 ALIGNMENT 48 YS2-9g14.q1k chr12 92 139 10030 10077 F 48 100.00 1171 reject_low 13 ALIGNMENT 37 YS2-9g14.q1k chr14 38 82 5373 5418 F 45 95.56 1171 reject_low 16 ALIGNMENT 33 YS2-9g14.q1k chr16 173 219 6145 6191 F 47 91.49 1171 reject_low 4 ALIGNMENT 0 YS2-9g14.q1k chr12 83 772 10003 10002 F 690 0.00 1171 reject_low 5 ALIGNMENT 0 YS2-9g14.q1k chr11 772 283 666000 665999 C 490 0.00 1171 reject_low 6 ALIGNMENT 48 YS2-9g14.q1k chr09 92 139 5834 5881 F 48 100.00 1171 reject_low 11 ALIGNMENT 0 YS2-9g14.q1k chr12 91 83 1072819 1072844 C 9 0.00 1171 reject_low 3 ALIGNMENT 32 YS2-9g14.q1k chr11 282 232 665999 666048 C 51 90.20 1171 reject_low 6 ALIGNMENT 47 YS2-9g14.q1k chr04 138 92 1526571 1526617 C 47 100.00 1171 reject_low 17 ALIGNMENT 0 YS2-9g14.q1k chr08 140 772 4274 4273 F 633 0.00 1171 reject_low 9 ALIGNMENT 0 YS2-9g14.q1k chr07 91 83 1085524 1085549 C 9 0.00 1171 reject_low 8 ALIGNMENT 47 YS2-9g14.q1k chr12 138 92 1072772 1072818 C 47 100.00 1171 reject_low 3 ALIGNMENT 95 YS2-9g14.q1k chr05 139 38 571416 571518 C 102 98.04 1171 ambiguous_tel 1 ALIGNMENT 953 YS2-9g15.q1k chr10 1157 42 126081 127204 C 1116 95.88 1281 accept 0 ALIGNMENT 1000 YS2-9g15.p1k chr10 36 1194 124183 125344 F 1159 96.12 1196 accept 0 ALIGNMENT 0 YS2-9g18.p1k chr12 62 539 451419 451418 F 478 0.00 1186 reject_low 2 ALIGNMENT 808 YS2-9g18.p1k chr12 29 1134 460021 461161 F 1106 92.86 1186 accept 0 ALIGNMENT 0 YS2-9g18.q1k chr12 820 630 451420 451419 C 191 0.00 1183 reject_low 1 ALIGNMENT 0 YS2-9g18.q1k chr12 820 275 489755 489754 C 546 0.00 1183 reject_low 3 ALIGNMENT 149 YS2-9g18.p1k chr12 895 1134 489754 489992 F 240 88.33 1186 reject_low 4 ALIGNMENT 423 YS2-9g18.p1k chr12 540 1134 451419 452024 F 595 92.44 1186 reject_low 2 ALIGNMENT 777 YS2-9g18.q1k chr12 1141 36 460023 461161 C 1106 92.13 1183 accept 0 ALIGNMENT 218 YS2-9g18.q1k chr12 274 36 489754 489992 C 239 97.49 1183 reject_low 3 ALIGNMENT 503 YS2-9g18.q1k chr12 629 36 451419 452024 C 594 96.30 1183 reject_low 1 ALIGNMENT 0 YS2-9g18.p1k chr12 62 894 489754 489753 F 833 0.00 1186 reject_low 4 ALIGNMENT 39 YS2-9g20.q1k vc_5 435 397 5025 5063 C 39 100.00 435 reject_low 5 ALIGNMENT 38 YS2-9g20.q1k vc_7 398 435 13525 13562 F 38 100.00 435 reject_low 6 ALIGNMENT 36 YS2-9g20.q1k vc_5 432 397 1 36 C 36 100.00 435 reject_low 7 ALIGNMENT 41 YS2-9g20.q1k vc_1 435 395 2472 2512 C 41 100.00 435 reject_low 2 ALIGNMENT 361 YS2-9g20.q1k chr13 395 29 424084 424450 C 367 100.00 435 accept_chi 1 ALIGNMENT 361 YS2-9g20.p1k chr13 34 400 424084 424450 F 367 100.00 418 accept_chi 0 ALIGNMENT 0 YS2-9g20.q1k vc_3 394 62 2513 2512 C 333 0.00 435 reject_low 3 ALIGNMENT 0 YS2-9g20.q1k chr13 435 396 424085 424084 C 40 0.00 435 accept_chi 1 ALIGNMENT 0 YS2-9g20.q1k vc_4 62 394 5831 5830 F 333 0.00 435 reject_low 4 ALIGNMENT 0 YS2-9g20.q1k vc_5 396 62 37 36 C 335 0.00 435 reject_low 7 ALIGNMENT 0 YS2-9g20.q1k vc_7 62 397 13525 13524 F 336 0.00 435 reject_low 6 ALIGNMENT 0 YS2-9g20.q1k vc_5 396 62 5064 5063 C 335 0.00 435 reject_low 5 ALIGNMENT 0 YS2-9g20.p1k chr13 401 418 424450 424449 F 18 0.00 418 accept_chi 0 ALIGNMENT 41 YS2-9g20.q1k vc_4 395 435 5831 5871 F 41 100.00 435 reject_low 4 ALIGNMENT 41 YS2-9g20.q1k vc_3 435 395 2472 2512 C 41 100.00 435 reject_low 3 ALIGNMENT 0 YS2-9g20.q1k vc_1 394 62 2513 2512 C 333 0.00 435 reject_low 2 ALIGNMENT 1021 YS2-9g21.p1k chr04 1138 32 1385972 1387079 C 1107 97.56 1140 accept 0 ALIGNMENT 897 YS2-9g21.q1k chr04 39 1087 1382754 1383801 F 1049 96.09 1216 accept 0 ALIGNMENT 856 YS2-9g23.p1k chr12 1102 32 460209 461295 C 1071 94.96 1137 accept 0 ALIGNMENT 993 YS2-9g23.q1k chr12 33 1152 455600 456710 F 1120 96.96 1154 accept 0 ALIGNMENT 629 YS2-9g23.p1k chr12 759 32 451419 452158 C 728 96.70 1137 reject_low 2 ALIGNMENT 993 YS2-9g23.q1k chr12 33 1152 464737 465847 F 1120 96.96 1154 reject_low 1 ALIGNMENT 0 YS2-9g23.p1k chr12 768 405 489755 489754 C 364 0.00 1137 reject_low 3 ALIGNMENT 343 YS2-9g23.p1k chr12 404 32 489754 490126 C 373 97.86 1137 reject_low 3 ALIGNMENT 872 YS2-9g24.p1k chr13 142 1128 552775 553763 F 987 97.06 1137 accept 0 ALIGNMENT 952 YS2-9g24.q1k chr13 1052 34 556819 557834 C 1019 98.33 1153 accept 0 ALIGNMENT 0 YS2-9g24.p1k chr04 795 274 306923 306922 C 522 0.00 1137 reject_low 1 ALIGNMENT 94 YS2-9g24.p1k chr04 273 142 306922 307053 C 132 90.91 1137 reject_low 1 ALIGNMENT 920 YS2-9h01.q1k chr14 1055 25 545425 546451 C 1031 97.67 1218 accept 0 ALIGNMENT 957 YS2-9h01.p1k chr14 32 1150 543018 544137 F 1119 95.80 1188 accept 0 ALIGNMENT 664 YS2-9h02.p1k chr13 29 940 838102 839025 F 912 92.32 1221 accept 0 ALIGNMENT 947 YS2-9h02.q1k chr13 1128 37 842006 843111 C 1092 96.25 1186 accept 0 ALIGNMENT 0 YS2-9h03.p1k chr05 62 255 423948 423947 F 194 0.00 727 reject_low 2 ALIGNMENT 40 YS2-9h03.q1k vc_3 759 720 2472 2511 C 40 100.00 759 reject_low 6 ALIGNMENT 38 YS2-9h03.q1k vc_7 722 759 13525 13562 F 38 100.00 759 reject_low 9 ALIGNMENT 0 YS2-9h03.q1k chr07 720 759 148823 148822 F 40 0.00 759 accept_chi 0 ALIGNMENT 0 YS2-9h03.q1k vc_4 62 719 5832 5831 F 658 0.00 759 reject_low 7 ALIGNMENT 40 YS2-9h03.q1k vc_1 759 720 2472 2511 C 40 100.00 759 reject_low 4 ALIGNMENT 0 YS2-9h03.q1k chr05 130 62 424308 424307 C 69 0.00 759 reject_low 3 ALIGNMENT 659 YS2-9h03.q1k chr07 38 719 148142 148823 F 682 100.00 759 accept_chi 0 ALIGNMENT 40 YS2-9h03.q1k vc_2 759 720 2105 2144 C 40 100.00 759 reject_low 5 ALIGNMENT 0 YS2-9h03.q1k vc_5 720 62 5064 5063 C 659 0.00 759 reject_low 8 ALIGNMENT 0 YS2-9h03.q1k chr05 759 491 423949 423948 C 269 0.00 759 reject_low 3 ALIGNMENT 39 YS2-9h03.q1k vc_5 759 721 5025 5063 C 39 100.00 759 reject_low 8 ALIGNMENT 0 YS2-9h03.q1k vc_3 719 62 2512 2511 C 658 0.00 759 reject_low 6 ALIGNMENT 40 YS2-9h03.q1k vc_4 720 759 5832 5871 F 40 100.00 759 reject_low 7 ALIGNMENT 0 YS2-9h03.p1k chr07 727 709 148143 148142 C 19 0.00 727 accept_chi 1 ALIGNMENT 0 YS2-9h03.q1k vc_7 62 721 13525 13524 F 660 0.00 759 reject_low 9 ALIGNMENT 0 YS2-9h03.p1k chr05 616 727 424307 424306 F 112 0.00 727 reject_low 2 ALIGNMENT 0 YS2-9h03.q1k vc_2 719 62 2145 2144 C 658 0.00 759 reject_low 5 ALIGNMENT 271 YS2-9h03.p1k chr05 256 615 423948 424307 F 360 92.22 727 reject_low 2 ALIGNMENT 658 YS2-9h03.p1k chr07 708 26 148142 148824 C 683 99.85 727 accept_chi 1 ALIGNMENT 36 YS2-9h03.q1k vc_5 756 721 1 36 C 36 100.00 759 reject_low 10 ALIGNMENT 0 YS2-9h03.q1k vc_1 719 62 2512 2511 C 658 0.00 759 reject_low 4 ALIGNMENT 0 YS2-9h03.q1k vc_5 720 62 37 36 C 659 0.00 759 reject_low 10 ALIGNMENT 271 YS2-9h03.q1k chr05 490 131 423948 424307 C 360 92.22 759 reject_low 3 ALIGNMENT 471 YS2-9h04.q1k chr13 881 36 842273 843107 C 846 86.64 1339 accept 0 ALIGNMENT 0 YS2-9h05.p1k chr15 62 575 506351 506350 F 514 0.00 1216 reject_low 1 ALIGNMENT 221 YS2-9h05.p1k chr15 576 973 506351 506754 F 398 84.92 1216 reject_low 1 ALIGNMENT 1007 YS2-9h05.q1k chr14 30 1203 440424 441599 F 1174 95.91 1206 accept 0 ALIGNMENT 956 YS2-9h05.p1k chr14 1216 38 443166 444354 C 1179 94.66 1216 accept 0 ALIGNMENT 916 YS2-9h06.q1k chr16 39 1200 555660 556828 F 1162 94.92 1200 accept 0 ALIGNMENT 985 YS2-9h06.p1k chr16 1182 32 559049 560205 C 1151 96.09 1208 accept 0 ALIGNMENT 955 YS2-9h07.q1k chr06 40 1139 241536 242635 F 1100 96.55 1255 accept 0 ALIGNMENT 992 YS2-9h07.p1k chr06 1236 28 245139 246339 C 1209 95.29 1243 accept 0 ALIGNMENT 0 YS2-9h10.p1k chr07 860 62 79045 79044 C 799 0.00 1276 reject_low 1 ALIGNMENT 22 YS2-9h10.p1k chr07 903 861 79002 79044 C 43 93.02 1276 reject_low 1 ALIGNMENT 1021 YS2-9h10.q1k chr11 51 1249 275300 276495 F 1199 96.00 1255 accept 0 ALIGNMENT 965 YS2-9h10.p1k chr11 1264 41 280231 281436 C 1224 95.34 1276 accept 0 ALIGNMENT 983 YS2-9h11.p1k chr04 1168 33 795890 797037 C 1136 96.39 1209 accept 0 ALIGNMENT 938 YS2-9h11.q1k chr04 39 1207 791616 792797 F 1169 94.95 1220 accept 0 ALIGNMENT 993 YS2-9h12.p1k chr16 40 1226 715453 716653 F 1187 95.96 1227 accept 0 ALIGNMENT 946 YS2-9h12.q1k chr16 1209 35 718707 719869 C 1175 95.06 1237 accept 0 ALIGNMENT 1042 YS2-9h14.p1k chr08 29 1195 422126 423293 F 1167 96.83 1195 accept 0 ALIGNMENT 934 YS2-9h14.q1k chr08 1161 40 425322 426465 C 1122 95.90 1176 accept 0 ALIGNMENT 0 YS2-9h16.q1k chr02 322 284 109708 109707 C 39 0.00 322 accept 0 ALIGNMENT 38 YS2-9h16.q1k vc_7 285 322 13525 13562 F 38 100.00 322 reject_low 5 ALIGNMENT 0 YS2-9h16.q1k vc_5 283 62 37 36 C 222 0.00 322 reject_low 6 ALIGNMENT 0 YS2-9h16.q1k vc_1 281 62 2513 2512 C 220 0.00 322 reject_low 1 ALIGNMENT 41 YS2-9h16.q1k vc_3 322 282 2472 2512 C 41 100.00 322 reject_low 2 ALIGNMENT 238 YS2-9h16.q1k chr02 283 29 109707 109962 C 255 99.61 322 accept 0 ALIGNMENT 0 YS2-9h16.q1k vc_4 62 281 5831 5830 F 220 0.00 322 reject_low 3 ALIGNMENT 41 YS2-9h16.q1k vc_1 322 282 2472 2512 C 41 100.00 322 reject_low 1 ALIGNMENT 244 YS2-9h16.p1k chr02 25 282 109705 109962 F 258 100.00 299 accept 0 ALIGNMENT 0 YS2-9h16.p1k chr02 283 299 109962 109961 F 17 0.00 299 accept 0 ALIGNMENT 0 YS2-9h16.q1k vc_7 62 284 13525 13524 F 223 0.00 322 reject_low 5 ALIGNMENT 39 YS2-9h16.q1k vc_5 322 284 5025 5063 C 39 100.00 322 reject_low 4 ALIGNMENT 36 YS2-9h16.q1k vc_5 319 284 1 36 C 36 100.00 322 reject_low 6 ALIGNMENT 41 YS2-9h16.q1k vc_4 282 322 5831 5871 F 41 100.00 322 reject_low 3 ALIGNMENT 0 YS2-9h16.q1k vc_3 281 62 2513 2512 C 220 0.00 322 reject_low 2 ALIGNMENT 0 YS2-9h16.q1k vc_5 283 62 5064 5063 C 222 0.00 322 reject_low 4 ALIGNMENT 1013 YS2-9h17.q1k chr16 1169 52 159639 160755 C 1118 97.41 1198 accept 0 ALIGNMENT 972 YS2-9h17.p1k chr16 44 1178 156556 157689 F 1135 95.95 1182 accept 0 ALIGNMENT 772 YS2-9h19.q1k chr14 964 31 206518 207438 C 934 96.04 1268 accept 0 ALIGNMENT 837 YS2-9h19.p1k chr14 24 1082 206032 207074 F 1059 94.81 1198 accept 0 ALIGNMENT 917 YS2-9h21.p1k chr13 26 1128 518843 519944 F 1103 96.01 1132 accept_chi 1 ALIGNMENT 981 YS2-9h21.q1k chr08 1153 37 422796 423904 C 1117 96.87 1156 accept_chi 0 ALIGNMENT 0 YS2-9h22.q1k chr10 398 359 503442 503441 C 40 0.00 398 accept_chi 0 ALIGNMENT 320 YS2-9h22.q1k chr10 358 36 503441 503763 C 323 100.00 398 accept_chi 0 ALIGNMENT 38 YS2-9h22.q1k vc_7 361 398 13525 13562 F 38 100.00 398 reject_low 6 ALIGNMENT 315 YS2-9h22.p1k chr10 30 351 503441 503763 F 322 99.69 370 accept_chi 1 ALIGNMENT 0 YS2-9h22.q1k vc_5 359 62 37 36 C 298 0.00 398 reject_low 7 ALIGNMENT 0 YS2-9h22.p1k chr10 352 370 503763 503762 F 19 0.00 370 accept_chi 1 ALIGNMENT 41 YS2-9h22.q1k vc_1 398 358 2472 2512 C 41 100.00 398 reject_low 2 ALIGNMENT 39 YS2-9h22.q1k vc_5 398 360 5025 5063 C 39 100.00 398 reject_low 5 ALIGNMENT 0 YS2-9h22.q1k vc_3 357 62 2513 2512 C 296 0.00 398 reject_low 3 ALIGNMENT 0 YS2-9h22.q1k vc_4 62 357 5831 5830 F 296 0.00 398 reject_low 4 ALIGNMENT 41 YS2-9h22.q1k vc_3 398 358 2472 2512 C 41 100.00 398 reject_low 3 ALIGNMENT 0 YS2-9h22.q1k vc_5 359 62 5064 5063 C 298 0.00 398 reject_low 5 ALIGNMENT 41 YS2-9h22.q1k vc_4 358 398 5831 5871 F 41 100.00 398 reject_low 4 ALIGNMENT 36 YS2-9h22.q1k vc_5 395 360 1 36 C 36 100.00 398 reject_low 7 ALIGNMENT 0 YS2-9h22.q1k vc_7 62 360 13525 13524 F 299 0.00 398 reject_low 6 ALIGNMENT 0 YS2-9h22.q1k vc_1 357 62 2513 2512 C 296 0.00 398 reject_low 2 ALIGNMENT 954 YS2-9h23.q1k chr16 33 1130 143360 144459 F 1098 96.72 1132 accept 0 ALIGNMENT 943 YS2-9h23.p1k chr16 1134 33 146580 147677 C 1102 96.37 1134 accept 0 ALIGNMENT 970 YS2-9i01.q1k chr16 1207 38 250205 251390 C 1170 95.90 1254 accept 0 ALIGNMENT 1009 YS2-9i01.p1k chr16 36 1155 249067 250194 F 1120 97.68 1157 accept 0 ALIGNMENT 987 YS2-9i02.p1k chr11 33 1160 29226 30352 F 1128 96.19 1163 accept 0 ALIGNMENT 957 YS2-9i02.q1k chr11 1059 31 30030 31059 C 1029 98.74 1168 accept 0 ALIGNMENT 0 YS2-9i03.q1k chr12 186 226 466253 466252 F 41 0.00 226 accept 1 ALIGNMENT 0 YS2-9i03.q1k chr12 186 226 457116 457115 F 41 0.00 226 accept 0 ALIGNMENT 0 YS2-9i03.q1k vc_4 62 185 5831 5830 F 124 0.00 226 reject_low 4 ALIGNMENT 38 YS2-9i03.q1k vc_7 189 226 13525 13562 F 38 100.00 226 reject_low 6 ALIGNMENT 137 YS2-9i03.q1k chr12 38 185 456969 457116 F 148 98.65 226 accept 0 ALIGNMENT 36 YS2-9i03.q1k vc_5 223 188 1 36 C 36 100.00 226 reject_low 7 ALIGNMENT 41 YS2-9i03.q1k vc_3 226 186 2472 2512 C 41 100.00 226 reject_low 3 ALIGNMENT 0 YS2-9i03.q1k vc_5 187 62 37 36 C 126 0.00 226 reject_low 7 ALIGNMENT 0 YS2-9i03.q1k vc_1 185 62 2513 2512 C 124 0.00 226 reject_low 2 ALIGNMENT 0 YS2-9i03.q1k vc_7 62 188 13525 13524 F 127 0.00 226 reject_low 6 ALIGNMENT 41 YS2-9i03.q1k vc_4 186 226 5831 5871 F 41 100.00 226 reject_low 4 ALIGNMENT 41 YS2-9i03.q1k vc_1 226 186 2472 2512 C 41 100.00 226 reject_low 2 ALIGNMENT 39 YS2-9i03.q1k vc_5 226 188 5025 5063 C 39 100.00 226 reject_low 5 ALIGNMENT 0 YS2-9i03.q1k vc_3 185 62 2513 2512 C 124 0.00 226 reject_low 3 ALIGNMENT 137 YS2-9i03.q1k chr12 38 185 466106 466253 F 148 98.65 226 accept 1 ALIGNMENT 0 YS2-9i03.q1k vc_5 187 62 5064 5063 C 126 0.00 226 reject_low 5 ALIGNMENT 230 YS2-9i05.p1k chr11 755 437 313248 313565 C 319 93.10 1170 reject_low 2 ALIGNMENT 0 YS2-9i05.p1k chr07 62 474 535266 535265 F 413 0.00 1170 reject_low 18 ALIGNMENT 118 YS2-9i05.p1k chr03 736 468 168615 168884 C 269 84.01 1170 reject_low 14 ALIGNMENT 0 YS2-9i05.p1k chr13 474 62 357285 357284 C 413 0.00 1170 reject_low 19 ALIGNMENT 122 YS2-9i05.p1k chr02 475 756 259627 259907 F 282 84.40 1170 reject_low 12 ALIGNMENT 97 YS2-9i05.p1k chr03 475 736 151568 151828 F 262 82.44 1170 reject_low 22 ALIGNMENT 0 YS2-9i05.p1k chr04 789 757 878299 878298 C 33 0.00 1170 reject_low 4 ALIGNMENT 127 YS2-9i05.p1k chr01 736 468 160259 160531 C 269 85.50 1170 reject_low 7 ALIGNMENT 0 YS2-9i05.p1k chr07 737 789 535526 535525 F 53 0.00 1170 reject_low 18 ALIGNMENT 0 YS2-9i05.p1k chr15 762 789 600739 600738 F 28 0.00 1170 reject_low 3 ALIGNMENT 0 YS2-9i05.p1k chr13 789 737 357025 357024 C 53 0.00 1170 reject_low 19 ALIGNMENT 0 YS2-9i05.p1k chr02 572 542 258849 258859 C 31 0.00 1170 reject_low 26 ALIGNMENT 125 YS2-9i05.p1k chr07 756 475 817398 817678 C 282 85.11 1170 reject_low 10 ALIGNMENT 0 YS2-9i05.p1k chr02 485 470 258916 258943 C 16 0.00 1170 reject_low 26 ALIGNMENT 0 YS2-9i05.p1k chr13 757 789 184501 184500 F 33 0.00 1170 reject_low 13 ALIGNMENT 0 YS2-9i05.p1k chr07 734 789 817387 817386 F 56 0.00 1170 reject_low 24 ALIGNMENT 0 YS2-9i05.p1k chr02 789 757 258669 258668 C 33 0.00 1170 reject_low 26 ALIGNMENT 127 YS2-9i05.p1k chr05 756 475 498079 498365 C 282 84.75 1170 reject_low 6 ALIGNMENT 0 YS2-9i05.p1k chr03 737 789 151828 151827 F 53 0.00 1170 reject_low 22 ALIGNMENT 0 YS2-9i05.p1k chr04 467 62 878588 878587 C 406 0.00 1170 reject_low 4 ALIGNMENT 0 YS2-9i05.p1k chr05 833 438 566689 567015 C 396 0.00 1170 accept 0 ALIGNMENT 0 YS2-9i05.p1k chr05 474 62 498366 498365 C 413 0.00 1170 reject_low 6 ALIGNMENT 0 YS2-9i05.p1k chr05 789 757 498080 498079 C 33 0.00 1170 reject_low 6 ALIGNMENT 0 YS2-9i05.p1k chr07 474 62 817679 817678 C 413 0.00 1170 reject_low 10 ALIGNMENT 103 YS2-9i05.p1k chr16 475 736 560529 560789 F 262 83.21 1170 reject_low 21 ALIGNMENT 0 YS2-9i05.p1k chr15 757 789 595152 595151 F 33 0.00 1170 reject_low 11 ALIGNMENT 94 YS2-9i05.p1k chr03 736 475 124151 124411 C 262 82.44 1170 reject_low 23 ALIGNMENT 0 YS2-9i05.p1k chr04 757 789 1096099 1096098 F 33 0.00 1170 reject_low 5 ALIGNMENT 0 YS2-9i05.p1k chr03 474 62 143027 143026 C 413 0.00 1170 reject_low 25 ALIGNMENT 26 YS2-9i05.p1k chr02 469 437 258944 258976 C 33 96.97 1170 reject_low 26 ALIGNMENT 0 YS2-9i05.p1k chr01 789 737 160260 160259 C 53 0.00 1170 reject_low 7 ALIGNMENT 47 YS2-9i05.p1k chr02 541 486 258860 258915 C 56 96.43 1170 reject_low 26 ALIGNMENT 127 YS2-9i05.p1k chr01 736 468 165847 166119 C 269 85.50 1170 reject_low 8 ALIGNMENT 157 YS2-9i05.p1k chr05 1125 834 566389 566688 C 292 84.93 1170 accept 0 ALIGNMENT 0 YS2-9i05.p1k chr13 62 474 184221 184220 F 413 0.00 1170 reject_low 13 ALIGNMENT 0 YS2-9i05.p1k chr07 789 757 817399 817398 C 33 0.00 1170 reject_low 10 ALIGNMENT 0 YS2-9i05.p1k chr03 62 474 151568 151567 F 413 0.00 1170 reject_low 22 ALIGNMENT 0 YS2-9i05.p1k chr04 437 62 434738 434737 C 376 0.00 1170 reject_low 1 ALIGNMENT 275 YS2-9i05.p1k chr05 437 32 567016 567424 C 406 91.38 1170 accept 0 ALIGNMENT 69 YS2-9i05.p1k chr03 699 475 142803 143026 C 225 81.33 1170 reject_low 25 ALIGNMENT 118 YS2-9i05.p1k chr14 468 736 519208 519477 F 269 84.01 1170 reject_low 15 ALIGNMENT 134 YS2-9i05.p1k chr04 756 468 878298 878587 C 289 84.78 1170 reject_low 4 ALIGNMENT 0 YS2-9i05.p1k chr11 436 62 313566 313565 C 375 0.00 1170 reject_low 2 ALIGNMENT 0 YS2-9i05.p1k chr03 62 467 149524 149523 F 406 0.00 1170 reject_low 17 ALIGNMENT 830 YS2-9i05.q1k chr05 28 1103 560903 561988 F 1076 94.05 1278 accept 0 ALIGNMENT 112 YS2-9i05.p1k chr13 736 475 357024 357284 C 262 84.73 1170 reject_low 19 ALIGNMENT 0 YS2-9i05.p1k chr02 436 62 258977 258976 C 375 0.00 1170 reject_low 26 ALIGNMENT 0 YS2-9i05.p1k chr14 737 789 519477 519476 F 53 0.00 1170 reject_low 15 ALIGNMENT 0 YS2-9i05.p1k chr15 62 474 594872 594871 F 413 0.00 1170 reject_low 11 ALIGNMENT 0 YS2-9i05.p1k chr01 467 62 166120 166119 C 406 0.00 1170 reject_low 8 ALIGNMENT 0 YS2-9i05.p1k chr02 62 474 259627 259626 F 413 0.00 1170 reject_low 12 ALIGNMENT 0 YS2-9i05.p1k chr12 789 737 475996 475995 C 53 0.00 1170 reject_low 9 ALIGNMENT 0 YS2-9i05.p1k chr14 62 467 524774 524773 F 406 0.00 1170 reject_low 16 ALIGNMENT 232 YS2-9i05.p1k chr04 756 438 434420 434737 C 319 93.42 1170 reject_low 1 ALIGNMENT 0 YS2-9i05.p1k chr16 62 474 560529 560528 F 413 0.00 1170 reject_low 21 ALIGNMENT 0 YS2-9i05.p1k chr04 789 757 434421 434420 C 33 0.00 1170 reject_low 1 ALIGNMENT 0 YS2-9i05.p1k chr03 474 62 124412 124411 C 413 0.00 1170 reject_low 23 ALIGNMENT 0 YS2-9i05.p1k chr03 789 700 142804 142803 C 90 0.00 1170 reject_low 25 ALIGNMENT 130 YS2-9i05.p1k chr04 475 756 1095813 1096099 F 282 84.75 1170 reject_low 5 ALIGNMENT 0 YS2-9i05.p1k chr14 737 789 525043 525042 F 53 0.00 1170 reject_low 16 ALIGNMENT 112 YS2-9i05.p1k chr07 475 736 535266 535526 F 262 84.35 1170 reject_low 18 ALIGNMENT 0 YS2-9i05.p1k chr04 62 474 1095813 1095812 F 413 0.00 1170 reject_low 5 ALIGNMENT 125 YS2-9i05.p1k chr15 475 756 594872 595152 F 282 84.75 1170 reject_low 11 ALIGNMENT 127 YS2-9i05.p1k chr12 736 468 475995 476267 C 269 85.50 1170 reject_low 9 ALIGNMENT 75 YS2-9i05.p1k chr07 551 733 817206 817387 F 183 84.15 1170 reject_low 24 ALIGNMENT 0 YS2-9i05.p1k chr11 789 756 313249 313248 C 34 0.00 1170 reject_low 2 ALIGNMENT 0 YS2-9i05.p1k chr03 467 62 168885 168884 C 406 0.00 1170 reject_low 14 ALIGNMENT 0 YS2-9i05.p1k chr01 789 737 165848 165847 C 53 0.00 1170 reject_low 8 ALIGNMENT 0 YS2-9i05.p1k chr03 789 737 168616 168615 C 53 0.00 1170 reject_low 14 ALIGNMENT 0 YS2-9i05.p1k chr01 467 62 160532 160531 C 406 0.00 1170 reject_low 7 ALIGNMENT 0 YS2-9i05.p1k chr02 737 789 221353 221352 F 53 0.00 1170 reject_low 20 ALIGNMENT 105 YS2-9i05.p1k chr02 475 736 221091 221353 F 262 83.59 1170 reject_low 20 ALIGNMENT 0 YS2-9i05.p1k chr03 736 789 149786 149785 F 54 0.00 1170 reject_low 17 ALIGNMENT 0 YS2-9i05.p1k chr14 62 467 519208 519207 F 406 0.00 1170 reject_low 15 ALIGNMENT 118 YS2-9i05.p1k chr14 468 736 524774 525043 F 269 84.01 1170 reject_low 16 ALIGNMENT 0 YS2-9i05.p1k chr16 737 789 560789 560788 F 53 0.00 1170 reject_low 21 ALIGNMENT 0 YS2-9i05.p1k chr03 789 737 124152 124151 C 53 0.00 1170 reject_low 23 ALIGNMENT 126 YS2-9i05.p1k chr15 475 761 600454 600739 F 287 84.67 1170 reject_low 3 ALIGNMENT 0 YS2-9i05.p1k chr07 62 550 817206 817205 F 489 0.00 1170 reject_low 24 ALIGNMENT 0 YS2-9i05.p1k chr02 757 789 259907 259906 F 33 0.00 1170 reject_low 12 ALIGNMENT 119 YS2-9i05.p1k chr13 475 756 184221 184501 F 282 84.04 1170 reject_low 13 ALIGNMENT 0 YS2-9i05.p1k chr12 467 62 476268 476267 C 406 0.00 1170 reject_low 9 ALIGNMENT 115 YS2-9i05.p1k chr03 468 735 149524 149786 F 268 83.96 1170 reject_low 17 ALIGNMENT 0 YS2-9i05.p1k chr02 62 474 221091 221090 F 413 0.00 1170 reject_low 20 ALIGNMENT 0 YS2-9i05.p1k chr15 62 474 600454 600453 F 413 0.00 1170 reject_low 3 ALIGNMENT 93 YS2-9i05.p1k chr02 756 573 258668 258848 C 184 86.96 1170 reject_low 26 ALIGNMENT 0 YS2-9i06.p1k chr03 777 702 142804 142803 C 76 0.00 1171 reject_low 25 ALIGNMENT 115 YS2-9i06.p1k chr03 470 737 149524 149786 F 268 83.96 1171 reject_low 17 ALIGNMENT 0 YS2-9i06.p1k chr12 469 62 476268 476267 C 408 0.00 1171 reject_low 9 ALIGNMENT 0 YS2-9i06.p1k chr05 835 440 566690 567015 C 396 0.00 1171 accept 0 ALIGNMENT 118 YS2-9i06.p1k chr03 738 470 168615 168884 C 269 84.01 1171 reject_low 14 ALIGNMENT 0 YS2-9i06.p1k chr16 739 777 560789 560788 F 39 0.00 1171 reject_low 21 ALIGNMENT 0 YS2-9i06.p1k chr13 759 777 184501 184500 F 19 0.00 1171 reject_low 13 ALIGNMENT 0 YS2-9i06.p1k chr04 62 476 1095813 1095812 F 415 0.00 1171 reject_low 5 ALIGNMENT 0 YS2-9i06.p1k chr07 739 777 535526 535525 F 39 0.00 1171 reject_low 18 ALIGNMENT 0 YS2-9i06.p1k chr13 62 476 184221 184220 F 415 0.00 1171 reject_low 13 ALIGNMENT 94 YS2-9i06.p1k chr03 738 477 124151 124411 C 262 82.44 1171 reject_low 23 ALIGNMENT 0 YS2-9i06.p1k chr14 62 469 524774 524773 F 408 0.00 1171 reject_low 16 ALIGNMENT 0 YS2-9i06.p1k chr07 476 62 817679 817678 C 415 0.00 1171 reject_low 10 ALIGNMENT 0 YS2-9i06.p1k chr03 777 739 168616 168615 C 39 0.00 1171 reject_low 14 ALIGNMENT 0 YS2-9i06.p1k chr03 476 62 143027 143026 C 415 0.00 1171 reject_low 25 ALIGNMENT 0 YS2-9i06.p1k chr02 487 472 258916 258943 C 16 0.00 1171 reject_low 26 ALIGNMENT 112 YS2-9i06.p1k chr07 477 738 535266 535526 F 262 84.35 1171 reject_low 18 ALIGNMENT 232 YS2-9i06.p1k chr04 758 440 434420 434737 C 319 93.42 1171 reject_low 1 ALIGNMENT 0 YS2-9i06.p1k chr16 62 476 560529 560528 F 415 0.00 1171 reject_low 21 ALIGNMENT 0 YS2-9i06.p1k chr01 777 739 160260 160259 C 39 0.00 1171 reject_low 7 ALIGNMENT 26 YS2-9i06.p1k chr02 471 439 258944 258976 C 33 96.97 1171 reject_low 26 ALIGNMENT 0 YS2-9i06.p1k chr03 738 777 149786 149785 F 40 0.00 1171 reject_low 17 ALIGNMENT 275 YS2-9i06.p1k chr05 439 34 567016 567424 C 406 91.38 1171 accept 0 ALIGNMENT 0 YS2-9i06.p1k chr13 476 62 357285 357284 C 415 0.00 1171 reject_low 19 ALIGNMENT 0 YS2-9i06.p1k chr02 759 777 259907 259906 F 19 0.00 1171 reject_low 12 ALIGNMENT 0 YS2-9i06.p1k chr11 777 758 313249 313248 C 20 0.00 1171 reject_low 2 ALIGNMENT 125 YS2-9i06.p1k chr07 758 477 817398 817678 C 282 85.11 1171 reject_low 10 ALIGNMENT 0 YS2-9i06.p1k chr02 574 544 258849 258859 C 31 0.00 1171 reject_low 26 ALIGNMENT 0 YS2-9i06.p1k chr01 777 739 165848 165847 C 39 0.00 1171 reject_low 8 ALIGNMENT 0 YS2-9i06.p1k chr04 469 62 878588 878587 C 408 0.00 1171 reject_low 4 ALIGNMENT 0 YS2-9i06.p1k chr12 777 739 475996 475995 C 39 0.00 1171 reject_low 9 ALIGNMENT 0 YS2-9i06.p1k chr14 739 777 525043 525042 F 39 0.00 1171 reject_low 16 ALIGNMENT 862 YS2-9i06.q1k chr05 41 1199 560901 562051 F 1159 93.18 1208 accept 0 ALIGNMENT 0 YS2-9i06.p1k chr03 777 739 124152 124151 C 39 0.00 1171 reject_low 23 ALIGNMENT 127 YS2-9i06.p1k chr01 738 470 165847 166119 C 269 85.50 1171 reject_low 8 ALIGNMENT 119 YS2-9i06.p1k chr13 477 758 184221 184501 F 282 84.04 1171 reject_low 13 ALIGNMENT 127 YS2-9i06.p1k chr05 758 477 498079 498365 C 282 84.75 1171 reject_low 6 ALIGNMENT 0 YS2-9i06.p1k chr05 476 62 498366 498365 C 415 0.00 1171 reject_low 6 ALIGNMENT 0 YS2-9i06.p1k chr04 777 759 878299 878298 C 19 0.00 1171 reject_low 4 ALIGNMENT 0 YS2-9i06.p1k chr03 469 62 168885 168884 C 408 0.00 1171 reject_low 14 ALIGNMENT 0 YS2-9i06.p1k chr04 759 777 1096099 1096098 F 19 0.00 1171 reject_low 5 ALIGNMENT 0 YS2-9i06.p1k chr15 759 777 595152 595151 F 19 0.00 1171 reject_low 11 ALIGNMENT 0 YS2-9i06.p1k chr02 62 476 221091 221090 F 415 0.00 1171 reject_low 20 ALIGNMENT 0 YS2-9i06.p1k chr01 469 62 160532 160531 C 408 0.00 1171 reject_low 7 ALIGNMENT 0 YS2-9i06.p1k chr02 438 62 258977 258976 C 377 0.00 1171 reject_low 26 ALIGNMENT 126 YS2-9i06.p1k chr15 477 763 600454 600739 F 287 84.67 1171 reject_low 3 ALIGNMENT 118 YS2-9i06.p1k chr14 470 738 519208 519477 F 269 84.01 1171 reject_low 15 ALIGNMENT 127 YS2-9i06.p1k chr01 738 470 160259 160531 C 269 85.50 1171 reject_low 7 ALIGNMENT 97 YS2-9i06.p1k chr03 477 738 151568 151828 F 262 82.44 1171 reject_low 22 ALIGNMENT 130 YS2-9i06.p1k chr04 477 758 1095813 1096099 F 282 84.75 1171 reject_low 5 ALIGNMENT 118 YS2-9i06.p1k chr14 470 738 524774 525043 F 269 84.01 1171 reject_low 16 ALIGNMENT 93 YS2-9i06.p1k chr02 758 575 258668 258848 C 184 86.96 1171 reject_low 26 ALIGNMENT 0 YS2-9i06.p1k chr14 739 777 519477 519476 F 39 0.00 1171 reject_low 15 ALIGNMENT 0 YS2-9i06.p1k chr03 476 62 124412 124411 C 415 0.00 1171 reject_low 23 ALIGNMENT 103 YS2-9i06.p1k chr16 477 738 560529 560789 F 262 83.21 1171 reject_low 21 ALIGNMENT 0 YS2-9i06.p1k chr07 777 759 817399 817398 C 19 0.00 1171 reject_low 10 ALIGNMENT 0 YS2-9i06.p1k chr13 777 739 357025 357024 C 39 0.00 1171 reject_low 19 ALIGNMENT 105 YS2-9i06.p1k chr02 477 738 221091 221353 F 262 83.59 1171 reject_low 20 ALIGNMENT 0 YS2-9i06.p1k chr15 62 476 600454 600453 F 415 0.00 1171 reject_low 3 ALIGNMENT 75 YS2-9i06.p1k chr07 553 735 817206 817387 F 183 84.15 1171 reject_low 24 ALIGNMENT 0 YS2-9i06.p1k chr15 62 476 594872 594871 F 415 0.00 1171 reject_low 11 ALIGNMENT 0 YS2-9i06.p1k chr04 777 759 434421 434420 C 19 0.00 1171 reject_low 1 ALIGNMENT 0 YS2-9i06.p1k chr01 469 62 166120 166119 C 408 0.00 1171 reject_low 8 ALIGNMENT 122 YS2-9i06.p1k chr02 477 758 259627 259907 F 282 84.40 1171 reject_low 12 ALIGNMENT 0 YS2-9i06.p1k chr02 739 777 221353 221352 F 39 0.00 1171 reject_low 20 ALIGNMENT 127 YS2-9i06.p1k chr12 738 470 475995 476267 C 269 85.50 1171 reject_low 9 ALIGNMENT 0 YS2-9i06.p1k chr07 736 777 817387 817386 F 42 0.00 1171 reject_low 24 ALIGNMENT 0 YS2-9i06.p1k chr03 62 469 149524 149523 F 408 0.00 1171 reject_low 17 ALIGNMENT 0 YS2-9i06.p1k chr07 62 476 535266 535265 F 415 0.00 1171 reject_low 18 ALIGNMENT 230 YS2-9i06.p1k chr11 757 439 313248 313565 C 319 93.10 1171 reject_low 2 ALIGNMENT 0 YS2-9i06.p1k chr11 438 62 313566 313565 C 377 0.00 1171 reject_low 2 ALIGNMENT 0 YS2-9i06.p1k chr07 62 552 817206 817205 F 491 0.00 1171 reject_low 24 ALIGNMENT 0 YS2-9i06.p1k chr14 62 469 519208 519207 F 408 0.00 1171 reject_low 15 ALIGNMENT 0 YS2-9i06.p1k chr05 777 759 498080 498079 C 19 0.00 1171 reject_low 6 ALIGNMENT 169 YS2-9i06.p1k chr05 1144 836 566379 566689 C 309 86.73 1171 accept 0 ALIGNMENT 125 YS2-9i06.p1k chr15 477 758 594872 595152 F 282 84.75 1171 reject_low 11 ALIGNMENT 0 YS2-9i06.p1k chr04 439 62 434738 434737 C 378 0.00 1171 reject_low 1 ALIGNMENT 0 YS2-9i06.p1k chr02 62 476 259627 259626 F 415 0.00 1171 reject_low 12 ALIGNMENT 0 YS2-9i06.p1k chr02 777 759 258669 258668 C 19 0.00 1171 reject_low 26 ALIGNMENT 69 YS2-9i06.p1k chr03 701 477 142803 143026 C 225 81.33 1171 reject_low 25 ALIGNMENT 0 YS2-9i06.p1k chr03 62 476 151568 151567 F 415 0.00 1171 reject_low 22 ALIGNMENT 47 YS2-9i06.p1k chr02 543 488 258860 258915 C 56 96.43 1171 reject_low 26 ALIGNMENT 112 YS2-9i06.p1k chr13 738 477 357024 357284 C 262 84.73 1171 reject_low 19 ALIGNMENT 0 YS2-9i06.p1k chr03 739 777 151828 151827 F 39 0.00 1171 reject_low 22 ALIGNMENT 134 YS2-9i06.p1k chr04 758 470 878298 878587 C 289 84.78 1171 reject_low 4 ALIGNMENT 41 YS2-9i07.q1k vc_4 616 656 5831 5871 F 41 100.00 656 reject_low 5 ALIGNMENT 41 YS2-9i07.q1k vc_1 656 616 2472 2512 C 41 100.00 656 reject_low 2 ALIGNMENT 38 YS2-9i07.q1k vc_7 619 656 13525 13562 F 38 100.00 656 reject_low 7 ALIGNMENT 0 YS2-9i07.q1k vc_1 615 62 2513 2512 C 554 0.00 656 reject_low 2 ALIGNMENT 0 YS2-9i07.q1k vc_3 615 62 2513 2512 C 554 0.00 656 reject_low 4 ALIGNMENT 558 YS2-9i07.q1k chr16 615 38 272061 272638 C 578 99.65 656 accept_chi 0 ALIGNMENT 548 YS2-9i07.p1k chr16 29 604 272061 272638 F 576 99.31 622 accept_chi 1 ALIGNMENT 0 YS2-9i07.q1k vc_2 615 62 2146 2145 C 554 0.00 656 reject_low 3 ALIGNMENT 0 YS2-9i07.q1k vc_4 62 615 5831 5830 F 554 0.00 656 reject_low 5 ALIGNMENT 41 YS2-9i07.q1k vc_2 656 616 2105 2145 C 41 100.00 656 reject_low 3 ALIGNMENT 0 YS2-9i07.q1k vc_5 617 62 5064 5063 C 556 0.00 656 reject_low 6 ALIGNMENT 41 YS2-9i07.q1k vc_3 656 616 2472 2512 C 41 100.00 656 reject_low 4 ALIGNMENT 36 YS2-9i07.q1k vc_5 653 618 1 36 C 36 100.00 656 reject_low 8 ALIGNMENT 39 YS2-9i07.q1k vc_5 656 618 5025 5063 C 39 100.00 656 reject_low 6 ALIGNMENT 0 YS2-9i07.q1k vc_7 62 618 13525 13524 F 557 0.00 656 reject_low 7 ALIGNMENT 0 YS2-9i07.q1k vc_5 617 62 37 36 C 556 0.00 656 reject_low 8 ALIGNMENT 0 YS2-9i07.q1k chr16 656 616 272062 272061 C 41 0.00 656 accept_chi 0 ALIGNMENT 0 YS2-9i07.p1k chr16 605 622 272638 272637 F 18 0.00 622 accept_chi 1 ALIGNMENT 979 YS2-9i08.q1k chr15 1155 40 457827 458943 C 1116 96.24 1206 accept 0 ALIGNMENT 964 YS2-9i08.p1k chr15 32 1177 455131 456289 F 1146 95.81 1210 accept 0 ALIGNMENT 1017 YS2-9i09.q1k chr04 1237 40 98214 99421 C 1198 96.41 1315 accept 0 ALIGNMENT 946 YS2-9i09.p1k chr04 28 1208 95032 96195 F 1181 95.34 1215 accept 0 ALIGNMENT 994 YS2-9i10.p1k chr16 1189 39 160872 162033 C 1151 96.09 1191 accept 0 ALIGNMENT 971 YS2-9i10.q1k chr16 45 1178 157075 158207 F 1134 96.47 1196 accept 0 ALIGNMENT 0 YS2-9i11.p1k chr05 301 283 13383 13382 C 19 0.00 301 ambiguous_tel 0 ALIGNMENT 220 YS2-9i11.p1k chr05 282 31 13382 13634 C 252 97.62 301 ambiguous_tel 0 ALIGNMENT 0 YS2-9i11.q1k vc_4 62 292 5831 5830 F 231 0.00 333 reject_low 5 ALIGNMENT 0 YS2-9i11.q1k vc_2 292 62 2146 2145 C 231 0.00 333 reject_low 3 ALIGNMENT 0 YS2-9i11.q1k chr05 293 333 13634 13633 F 41 0.00 333 ambiguous_tel 1 ALIGNMENT 220 YS2-9i11.q1k chr05 41 292 13382 13634 F 252 97.62 333 ambiguous_tel 1 ALIGNMENT 38 YS2-9i11.q1k vc_7 296 333 13525 13562 F 38 100.00 333 reject_low 7 ALIGNMENT 0 YS2-9i11.q1k vc_1 292 62 2513 2512 C 231 0.00 333 reject_low 2 ALIGNMENT 41 YS2-9i11.q1k vc_1 333 293 2472 2512 C 41 100.00 333 reject_low 2 ALIGNMENT 0 YS2-9i11.q1k vc_7 62 295 13525 13524 F 234 0.00 333 reject_low 7 ALIGNMENT 36 YS2-9i11.q1k vc_5 330 295 1 36 C 36 100.00 333 reject_low 8 ALIGNMENT 39 YS2-9i11.q1k vc_5 333 295 5025 5063 C 39 100.00 333 reject_low 6 ALIGNMENT 41 YS2-9i11.q1k vc_2 333 293 2105 2145 C 41 100.00 333 reject_low 3 ALIGNMENT 0 YS2-9i11.q1k vc_5 294 62 5064 5063 C 233 0.00 333 reject_low 6 ALIGNMENT 41 YS2-9i11.q1k vc_3 333 293 2472 2512 C 41 100.00 333 reject_low 4 ALIGNMENT 0 YS2-9i11.q1k vc_3 292 62 2513 2512 C 231 0.00 333 reject_low 4 ALIGNMENT 41 YS2-9i11.q1k vc_4 293 333 5831 5871 F 41 100.00 333 reject_low 5 ALIGNMENT 0 YS2-9i11.q1k vc_5 294 62 37 36 C 233 0.00 333 reject_low 8 ALIGNMENT 999 YS2-9i12.p1k chr12 1225 32 465438 466652 C 1194 94.64 1225 accept 1 ALIGNMENT 1032 YS2-9i12.q1k chr12 49 1239 452655 453847 F 1191 96.14 1251 accept 0 ALIGNMENT 999 YS2-9i12.p1k chr12 1225 32 456301 457515 C 1194 94.64 1225 accept 0 ALIGNMENT 1032 YS2-9i12.q1k chr12 49 1239 461792 462984 F 1191 96.14 1251 accept 1 ALIGNMENT 23 YS2-9i14.p1k chr07 262 215 735666 735714 C 48 87.50 1256 reject_low 10 ALIGNMENT 36 YS2-9i14.p1k chr10 262 105 540798 540961 C 158 77.22 1256 reject_low 8 ALIGNMENT 41 YS2-9i14.p1k chr10 262 73 204101 204298 C 190 76.84 1256 reject_low 6 ALIGNMENT 886 YS2-9i14.q1k chr09 1067 27 340045 341076 C 1041 96.45 1254 accept 0 ALIGNMENT 0 YS2-9i14.p1k chr14 62 87 102224 102223 F 26 0.00 1256 reject_low 4 ALIGNMENT 0 YS2-9i14.p1k chr11 62 87 313279 313278 F 26 0.00 1256 reject_low 1 ALIGNMENT 0 YS2-9i14.p1k chr03 793 263 151637 151636 C 531 0.00 1256 reject_low 7 ALIGNMENT 0 YS2-9i14.p1k chr15 87 62 595121 595120 C 26 0.00 1256 reject_low 5 ALIGNMENT 0 YS2-9i14.p1k chr10 793 263 204102 204101 C 531 0.00 1256 reject_low 6 ALIGNMENT 0 YS2-9i14.p1k chr05 793 263 138340 138339 C 531 0.00 1256 reject_low 9 ALIGNMENT 0 YS2-9i14.p1k chr10 793 263 540799 540798 C 531 0.00 1256 reject_low 8 ALIGNMENT 0 YS2-9i14.p1k chr07 315 263 735613 735665 C 53 0.00 1256 reject_low 10 ALIGNMENT 29 YS2-9i14.p1k chr05 262 105 138339 138504 C 158 75.95 1256 reject_low 9 ALIGNMENT 845 YS2-9i14.p1k chr09 28 1137 336546 337637 F 1110 94.32 1256 accept 0 ALIGNMENT 39 YS2-9i14.p1k chr03 262 137 151636 151766 C 126 80.16 1256 reject_low 7 ALIGNMENT 0 YS2-9i14.p1k chr03 136 62 151767 151766 C 75 0.00 1256 reject_low 7 ALIGNMENT 0 YS2-9i14.p1k chr15 793 263 594941 594940 C 531 0.00 1256 reject_low 5 ALIGNMENT 0 YS2-9i14.p1k chr13 87 62 184470 184469 C 26 0.00 1256 reject_low 3 ALIGNMENT 0 YS2-9i14.p1k chr07 214 62 735715 735714 C 153 0.00 1256 reject_low 10 ALIGNMENT 0 YS2-9i14.p1k chr10 104 62 540962 540961 C 43 0.00 1256 reject_low 8 ALIGNMENT 0 YS2-9i14.p1k chr05 104 62 138505 138504 C 43 0.00 1256 reject_low 9 ALIGNMENT 48 YS2-9i14.p1k chr14 88 262 102224 102404 F 175 78.29 1256 reject_low 4 ALIGNMENT 20 YS2-9i14.p1k chr07 358 316 735570 735612 C 43 83.72 1256 reject_low 10 ALIGNMENT 48 YS2-9i14.p1k chr13 262 88 184289 184469 C 175 78.29 1256 reject_low 3 ALIGNMENT 0 YS2-9i14.p1k chr07 793 359 735571 735570 C 435 0.00 1256 reject_low 10 ALIGNMENT 0 YS2-9i14.p1k chr13 793 263 184290 184289 C 531 0.00 1256 reject_low 3 ALIGNMENT 49 YS2-9i14.p1k chr16 262 55 560597 560812 C 208 77.40 1256 reject_low 2 ALIGNMENT 0 YS2-9i14.p1k chr16 793 263 560598 560597 C 531 0.00 1256 reject_low 2 ALIGNMENT 56 YS2-9i14.p1k chr11 88 306 313279 313504 F 219 77.63 1256 reject_low 1 ALIGNMENT 48 YS2-9i14.p1k chr15 262 88 594940 595120 C 175 78.29 1256 reject_low 5 ALIGNMENT 0 YS2-9i14.p1k chr14 263 793 102404 102403 F 531 0.00 1256 reject_low 4 ALIGNMENT 0 YS2-9i14.p1k chr11 307 793 313504 313503 F 487 0.00 1256 reject_low 1 ALIGNMENT 0 YS2-9i15.q1k vc_1 186 62 2512 2511 C 125 0.00 226 reject_low 1 ALIGNMENT 36 YS2-9i15.q1k vc_5 223 188 1 36 C 36 100.00 226 reject_low 7 ALIGNMENT 131 YS2-9i15.q1k chr13 186 40 436054 436200 C 147 97.28 226 accept 0 ALIGNMENT 40 YS2-9i15.q1k vc_1 226 187 2472 2511 C 40 100.00 226 reject_low 1 ALIGNMENT 0 YS2-9i15.q1k vc_5 187 62 37 36 C 126 0.00 226 reject_low 7 ALIGNMENT 39 YS2-9i15.q1k vc_5 226 188 5025 5063 C 39 100.00 226 reject_low 5 ALIGNMENT 0 YS2-9i15.q1k chr13 226 187 436055 436054 C 40 0.00 226 accept 0 ALIGNMENT 0 YS2-9i15.q1k vc_5 187 62 5064 5063 C 126 0.00 226 reject_low 5 ALIGNMENT 0 YS2-9i15.q1k vc_7 62 188 13525 13524 F 127 0.00 226 reject_low 6 ALIGNMENT 40 YS2-9i15.q1k vc_4 187 226 5832 5871 F 40 100.00 226 reject_low 4 ALIGNMENT 0 YS2-9i15.q1k vc_2 186 62 2145 2144 C 125 0.00 226 reject_low 2 ALIGNMENT 40 YS2-9i15.q1k vc_3 226 187 2472 2511 C 40 100.00 226 reject_low 3 ALIGNMENT 40 YS2-9i15.q1k vc_2 226 187 2105 2144 C 40 100.00 226 reject_low 2 ALIGNMENT 38 YS2-9i15.q1k vc_7 189 226 13525 13562 F 38 100.00 226 reject_low 6 ALIGNMENT 0 YS2-9i15.q1k vc_4 62 186 5832 5831 F 125 0.00 226 reject_low 4 ALIGNMENT 0 YS2-9i15.q1k vc_3 186 62 2512 2511 C 125 0.00 226 reject_low 3 ALIGNMENT 41 YS2-9i16.q1k vc_2 885 845 2105 2145 C 41 100.00 1252 reject_low 17 ALIGNMENT 41 YS2-9i16.q1k vc_3 885 845 2472 2512 C 41 100.00 1252 reject_low 18 ALIGNMENT 184 YS2-9i16.p1k vc_1 1217 860 1743 2105 C 358 84.92 1217 reject_low 4 ALIGNMENT 0 YS2-9i16.q1k vc_1 844 62 2513 2512 C 783 0.00 1252 reject_low 16 ALIGNMENT 0 YS2-9i16.q1k vc_4 62 844 5831 5830 F 783 0.00 1252 reject_low 14 ALIGNMENT 115 YS2-9i16.q1k vc_1 885 1075 2531 2710 F 191 91.10 1252 reject_low 9 ALIGNMENT 0 YS2-9i16.p1k vc_1 859 62 2473 2472 C 798 0.00 1217 reject_low 22 ALIGNMENT 790 YS2-9i16.q1k chr04 34 844 1232335 1233145 F 811 99.88 1252 accept_chi 0 ALIGNMENT 38 YS2-9i16.q1k vc_7 848 885 13525 13562 F 38 100.00 1252 reject_low 20 ALIGNMENT 115 YS2-9i16.q1k vc_3 885 1075 2531 2710 F 191 91.10 1252 reject_low 11 ALIGNMENT 0 YS2-9i16.q1k vc_4 884 62 1535 1534 C 823 0.00 1252 reject_low 15 ALIGNMENT 181 YS2-9i16.p1k vc_4 860 1204 5871 6219 F 345 85.22 1217 reject_low 8 ALIGNMENT 0 YS2-9i16.p1k vc_4 62 859 5871 5870 F 798 0.00 1217 reject_low 8 ALIGNMENT 0 YS2-9i16.p1k vc_1 859 62 2106 2105 C 798 0.00 1217 reject_low 4 ALIGNMENT 0 YS2-9i16.q1k vc_3 62 884 2531 2530 F 823 0.00 1252 reject_low 11 ALIGNMENT 184 YS2-9i16.p1k vc_5 1217 860 4663 5025 C 358 84.92 1217 reject_low 2 ALIGNMENT 0 YS2-9i16.p1k vc_5 859 62 5026 5025 C 798 0.00 1217 reject_low 2 ALIGNMENT 0 YS2-9i16.q1k vc_1 62 884 2531 2530 F 823 0.00 1252 reject_low 9 ALIGNMENT 26 YS2-9i16.p1k vc_1 890 860 2441 2472 C 31 96.77 1217 reject_low 22 ALIGNMENT 0 YS2-9i16.q1k vc_4 884 62 5813 5812 C 823 0.00 1252 reject_low 12 ALIGNMENT 781 YS2-9i16.p1k chr04 842 32 1232335 1233145 C 811 99.51 1217 accept_chi 1 ALIGNMENT 0 YS2-9i16.p1k vc_7 62 859 100 99 F 798 0.00 1217 reject_low 3 ALIGNMENT 36 YS2-9i16.q1k vc_5 882 847 1 36 C 36 100.00 1252 reject_low 21 ALIGNMENT 0 YS2-9i16.q1k vc_7 62 847 13525 13524 F 786 0.00 1252 reject_low 20 ALIGNMENT 115 YS2-9i16.q1k vc_7 1075 885 2548 2727 C 191 91.10 1252 reject_low 3 ALIGNMENT 0 YS2-9i16.q1k vc_5 846 62 5064 5063 C 785 0.00 1252 reject_low 19 ALIGNMENT 184 YS2-9i16.p1k vc_3 1217 860 1743 2105 C 358 84.92 1217 reject_low 6 ALIGNMENT 41 YS2-9i16.q1k vc_1 885 845 2472 2512 C 41 100.00 1252 reject_low 16 ALIGNMENT 0 YS2-9i16.p1k vc_2 859 62 2106 2105 C 798 0.00 1217 reject_low 5 ALIGNMENT 0 YS2-9i16.q1k vc_7 884 62 2728 2727 C 823 0.00 1252 reject_low 3 ALIGNMENT 0 YS2-9i16.p1k vc_3 859 62 2473 2472 C 798 0.00 1217 reject_low 23 ALIGNMENT 107 YS2-9i16.q1k vc_4 885 1047 126 281 F 163 92.02 1252 reject_low 13 ALIGNMENT 115 YS2-9i16.q1k vc_4 1075 885 5633 5812 C 191 91.10 1252 reject_low 12 ALIGNMENT 0 YS2-9i16.q1k vc_5 62 884 2398 2397 F 823 0.00 1252 reject_low 2 ALIGNMENT 184 YS2-9i16.p1k vc_7 860 1217 13562 13924 F 358 84.92 1217 reject_low 7 ALIGNMENT 0 YS2-9i16.q1k vc_3 844 62 2513 2512 C 783 0.00 1252 reject_low 18 ALIGNMENT 115 YS2-9i16.q1k vc_2 885 1075 2164 2343 F 191 91.10 1252 reject_low 10 ALIGNMENT 83 YS2-9i16.q1k vc_4 974 885 1446 1534 C 90 98.89 1252 reject_low 15 ALIGNMENT 0 YS2-9i16.p1k vc_3 859 62 2106 2105 C 798 0.00 1217 reject_low 6 ALIGNMENT 0 YS2-9i16.q1k vc_2 62 884 2164 2163 F 823 0.00 1252 reject_low 10 ALIGNMENT 41 YS2-9i16.q1k vc_4 845 885 5831 5871 F 41 100.00 1252 reject_low 14 ALIGNMENT 107 YS2-9i16.q1k vc_4 885 1047 6353 6508 F 163 92.02 1252|1,0 reject_low 14 ALIGNMENT 0 YS2-9i16.q1k vc_2 844 62 2146 2145 C 783 0.00 1252 reject_low 17 ALIGNMENT 115 YS2-9i16.q1k vc_5 885 1075 2398 2577 F 191 91.10 1252 reject_low 2 ALIGNMENT 39 YS2-9i16.q1k vc_5 885 847 5025 5063 C 39 100.00 1252 reject_low 19 ALIGNMENT 0 YS2-9i16.q1k vc_4 62 884 126 125 F 823 0.00 1252 reject_low 13 ALIGNMENT 184 YS2-9i16.p1k vc_2 1217 860 1743 2105 C 358 84.92 1217 reject_low 5 ALIGNMENT 0 YS2-9i16.q1k vc_5 846 62 37 36 C 785 0.00 1252 reject_low 21 ALIGNMENT 26 YS2-9i16.p1k vc_3 890 860 2441 2472 C 31 96.77 1217 reject_low 23 ALIGNMENT 184 YS2-9i16.p1k vc_7 860 1217 100 462 F 358 84.92 1217 reject_low 3 ALIGNMENT 0 YS2-9i16.p1k vc_7 62 859 13562 13561 F 798 0.00 1217 reject_low 7 ALIGNMENT 0 YS2-9i16.q1k vc_4 886 885 5872 6353 F 0 0.00 1252 reject_low 14 ALIGNMENT 419 YS2-9i17.p1k chr11 248 1177 61376 62297 F 930 84.41 1271 accept 0 ALIGNMENT 1002 YS2-9i17.q1k chr11 1293 32 65018 66291 C 1262 94.69 1304 accept 0 ALIGNMENT 304 YS2-9i18.p1k chr04 476 1101 1453314 1453940 F 626 83.07 1254 reject_low 1 ALIGNMENT 434 YS2-9i18.q1k chr04 889 57 1453322 1454154 C 833 84.03 1183 reject_low 1 ALIGNMENT 888 YS2-9i18.q1k chr12 41 1037 515542 516532 F 997 96.89 1183 accept 0 ALIGNMENT 929 YS2-9i18.p1k chr12 1211 139 515662 516734 C 1073 95.99 1254 accept 0 ALIGNMENT 0 YS2-9i18.p1k chr04 152 475 1453314 1453313 F 324 0.00 1254 reject_low 1 ALIGNMENT 827 YS2-9i20.q1k chr03 36 1017 219622 220589 F 982 96.54 1196 accept 0 ALIGNMENT 1020 YS2-9i20.p1k chr03 1158 29 222869 223998 C 1130 96.90 1158 accept 0 ALIGNMENT 998 YS2-9i21.q1k chr05 1152 50 310171 311272 C 1103 97.46 1276 accept 0 ALIGNMENT 969 YS2-9i21.p1k chr05 38 1168 307238 308378 F 1131 96.11 1177 accept 0 ALIGNMENT 990 YS2-9i22.q1k chr05 34 1163 289992 291124 F 1130 96.37 1168 accept 0 ALIGNMENT 466 YS2-9i22.q1k chr06 34 584 117568 118118 F 551 95.28 1168 reject_low 1 ALIGNMENT 0 YS2-9i22.q1k chr06 585 825 118118 118117 F 241 0.00 1168 reject_low 1 ALIGNMENT 999 YS2-9i22.p1k chr05 1160 25 293123 294263 C 1136 96.48 1162 accept 0 ALIGNMENT 935 YS2-9i23.q1k chr02 1152 38 707880 708994 C 1115 96.14 1294 accept 0 ALIGNMENT 984 YS2-9i23.p1k chr02 29 1136 704488 705596 F 1108 96.39 1150 accept 0 ALIGNMENT 0 YS2-9i24.p1k chr10 502 62 517801 517800 C 441 0.00 1158 reject_low 3 ALIGNMENT 0 YS2-9i24.p1k chr16 814 594 338829 338828 C 221 0.00 1158 reject_low 1 ALIGNMENT 73 YS2-9i24.p1k chr10 577 503 517726 517800 C 75 100.00 1158 reject_low 3 ALIGNMENT 0 YS2-9i24.p1k chr03 577 814 149988 149987 F 238 0.00 1158 reject_low 4 ALIGNMENT 914 YS2-9i24.p1k chr05 32 1077 99659 100703 F 1046 97.42 1158 accept 0 ALIGNMENT 75 YS2-9i24.p1k chr16 593 505 338828 338918 C 89 95.51 1158 reject_low 1 ALIGNMENT 69 YS2-9i24.p1k chr03 505 576 149917 149988 F 72 100.00 1158 reject_low 4 ALIGNMENT 0 YS2-9i24.p1k chr10 814 578 517727 517726 C 237 0.00 1158 reject_low 3 ALIGNMENT 930 YS2-9i24.q1k chr05 1093 31 104336 105384 C 1063 97.46 1162 accept 0 ALIGNMENT 0 YS2-9i24.p1k chr16 504 62 338919 338918 C 443 0.00 1158 reject_low 1 ALIGNMENT 0 YS2-9i24.p1k chr15 62 504 710201 710200 F 443 0.00 1158 reject_low 2 ALIGNMENT 0 YS2-9i24.p1k chr03 62 504 149917 149916 F 443 0.00 1158 reject_low 4 ALIGNMENT 77 YS2-9i24.p1k chr15 505 582 710201 710278 F 78 100.00 1158 reject_low 2 ALIGNMENT 0 YS2-9i24.p1k chr15 583 814 710278 710277 F 232 0.00 1158 reject_low 2 ALIGNMENT 972 YS2-9j01.q1k chr13 29 1160 902276 903397 F 1132 96.20 1165 accept 0 ALIGNMENT 795 YS2-9j01.p1k chr13 1001 36 905830 906788 C 966 95.45 1201 accept 0 ALIGNMENT 737 YS2-9j02.p1k chr15 39 899 638066 638916 F 861 96.40 1276 accept 0 ALIGNMENT 863 YS2-9j02.q1k chr15 1046 30 643391 644390 C 1017 97.35 1199 accept 0 ALIGNMENT 995 YS2-9j03.p1k chr04 1202 29 103777 104953 C 1174 94.97 1202 accept 0 ALIGNMENT 919 YS2-9j03.q1k chr04 49 1180 100139 101287 F 1132 94.79 1183 accept 0 ALIGNMENT 0 YS2-9j04.q1k vc_2 910 62 2146 2145 C 849 0.00 1194 reject_low 16 ALIGNMENT 41 YS2-9j04.q1k vc_3 951 911 2472 2512 C 41 100.00 1194 reject_low 17 ALIGNMENT 152 YS2-9j04.p1k vc_5 1196 923 4751 5025 C 274 86.13 1196 reject_low 2 ALIGNMENT 0 YS2-9j04.p1k vc_3 922 62 2106 2105 C 861 0.00 1196 reject_low 5 ALIGNMENT 152 YS2-9j04.p1k vc_1 1196 923 1831 2105 C 274 86.13 1196 reject_low 4 ALIGNMENT 0 YS2-9j04.q1k vc_3 910 62 2513 2512 C 849 0.00 1194 reject_low 17 ALIGNMENT 103 YS2-9j04.q1k vc_7 1157 951 2513 2727 C 207 84.06 1194 reject_low 3 ALIGNMENT 41 YS2-9j04.q1k vc_1 951 911 2472 2512 C 41 100.00 1194 reject_low 15 ALIGNMENT 0 YS2-9j04.q1k vc_4 62 910 5831 5830 F 849 0.00 1194 reject_low 13 ALIGNMENT 0 YS2-9j04.p1k vc_5 922 62 5026 5025 C 861 0.00 1196 reject_low 2 ALIGNMENT 0 YS2-9j04.p1k vc_7 62 922 100 99 F 861 0.00 1196 reject_low 3 ALIGNMENT 0 YS2-9j04.q1k vc_3 62 950 2531 2530 F 889 0.00 1194 reject_low 10 ALIGNMENT 102 YS2-9j04.q1k vc_4 1129 951 5629 5812 C 179 86.03 1194 reject_low 11 ALIGNMENT 0 YS2-9j04.q1k vc_5 912 62 37 36 C 851 0.00 1194 reject_low 21 ALIGNMENT 38 YS2-9j04.q1k vc_7 914 951 13525 13562 F 38 100.00 1194 reject_low 20 ALIGNMENT 41 YS2-9j04.q1k vc_2 951 911 2105 2145 C 41 100.00 1194 reject_low 16 ALIGNMENT 152 YS2-9j04.p1k vc_7 923 1196 13562 13836 F 274 86.13 1196 reject_low 7 ALIGNMENT 0 YS2-9j04.q1k vc_4 950 62 5813 5812 C 889 0.00 1194 reject_low 11 ALIGNMENT 828 YS2-9j04.p1k chr08 905 29 319971 320847 C 877 98.75 1196 accept_chi 1 ALIGNMENT 0 YS2-9j04.q1k vc_2 62 950 2164 2163 F 889 0.00 1194 reject_low 9 ALIGNMENT 0 YS2-9j04.q1k vc_4 950 62 1535 1534 C 889 0.00 1194 reject_low 14 ALIGNMENT 36 YS2-9j04.q1k vc_5 948 913 1 36 C 36 100.00 1194 reject_low 21 ALIGNMENT 103 YS2-9j04.q1k vc_3 951 1157 2531 2745 F 207 84.06 1194 reject_low 10 ALIGNMENT 0 YS2-9j04.q1k vc_7 950 62 2728 2727 C 889 0.00 1194 reject_low 3 ALIGNMENT 0 YS2-9j04.q1k vc_1 62 950 2531 2530 F 889 0.00 1194 reject_low 8 ALIGNMENT 95 YS2-9j04.q1k vc_4 951 1109 6353 6515 F 159 86.79 1194|1,0 reject_low 13 ALIGNMENT 0 YS2-9j04.q1k vc_5 912 62 5064 5063 C 851 0.00 1194 reject_low 18 ALIGNMENT 0 YS2-9j04.q1k vc_4 62 950 126 125 F 889 0.00 1194 reject_low 12 ALIGNMENT 847 YS2-9j04.q1k chr08 36 911 319971 320847 F 876 99.32 1194 accept_chi 0 ALIGNMENT 152 YS2-9j04.p1k vc_7 923 1196 100 374 F 274 86.13 1196 reject_low 3 ALIGNMENT 0 YS2-9j04.q1k vc_7 62 913 63 62 F 852 0.00 1194 reject_low 19 ALIGNMENT 152 YS2-9j04.p1k vc_4 923 1196 5871 6145 F 274 86.13 1196 reject_low 6 ALIGNMENT 38 YS2-9j04.q1k vc_7 914 951 63 100 F 38 100.00 1194 reject_low 19 ALIGNMENT 0 YS2-9j04.q1k vc_1 910 62 2513 2512 C 849 0.00 1194 reject_low 15 ALIGNMENT 0 YS2-9j04.p1k vc_4 62 922 5871 5870 F 861 0.00 1196 reject_low 6 ALIGNMENT 0 YS2-9j04.q1k vc_7 62 913 13525 13524 F 852 0.00 1194 reject_low 20 ALIGNMENT 55 YS2-9j04.q1k vc_4 1037 951 1446 1534 C 87 87.36 1194 reject_low 14 ALIGNMENT 39 YS2-9j04.q1k vc_5 951 913 5025 5063 C 39 100.00 1194 reject_low 18 ALIGNMENT 0 YS2-9j04.p1k vc_1 922 62 2106 2105 C 861 0.00 1196 reject_low 4 ALIGNMENT 103 YS2-9j04.q1k vc_5 951 1157 2398 2612 F 207 84.06 1194 reject_low 2 ALIGNMENT 0 YS2-9j04.q1k vc_5 62 950 2398 2397 F 889 0.00 1194 reject_low 2 ALIGNMENT 0 YS2-9j04.p1k vc_7 62 922 13562 13561 F 861 0.00 1196 reject_low 7 ALIGNMENT 152 YS2-9j04.p1k vc_3 1196 923 1831 2105 C 274 86.13 1196 reject_low 5 ALIGNMENT 0 YS2-9j04.q1k vc_4 952 951 5872 6353 F 0 0.00 1194 reject_low 13 ALIGNMENT 103 YS2-9j04.q1k vc_2 951 1157 2164 2378 F 207 84.06 1194 reject_low 9 ALIGNMENT 103 YS2-9j04.q1k vc_1 951 1157 2531 2745 F 207 84.06 1194 reject_low 8 ALIGNMENT 41 YS2-9j04.q1k vc_4 911 951 5831 5871 F 41 100.00 1194 reject_low 13 ALIGNMENT 95 YS2-9j04.q1k vc_4 951 1109 126 288 F 159 86.79 1194 reject_low 12 ALIGNMENT 899 YS2-9j06.q1k chr04 33 1057 286660 287680 F 1025 96.78 1217 accept_chi 0 ALIGNMENT 310 YS2-9j06.p1k chr15 637 55 1046049 1046625 C 583 86.28 1702 accept_chi 1 ALIGNMENT 936 YS2-9j10.p1k chr04 1147 41 1429035 1430138 C 1107 95.57 1221 accept 0 ALIGNMENT 840 YS2-9j10.q1k chr04 43 1098 1427708 1428748 F 1056 95.08 1223 accept 0 ALIGNMENT 342 YS2-9j14.q1k chr06 392 35 189950 190307 C 358 98.88 433 accept_chi 0 ALIGNMENT 39 YS2-9j14.q1k vc_5 433 395 5025 5063 C 39 100.00 433 reject_low 6 ALIGNMENT 0 YS2-9j14.q1k vc_2 392 62 2146 2145 C 331 0.00 433 reject_low 3 ALIGNMENT 36 YS2-9j14.q1k vc_5 430 395 1 36 C 36 100.00 433 reject_low 8 ALIGNMENT 0 YS2-9j14.q1k vc_3 392 62 2513 2512 C 331 0.00 433 reject_low 4 ALIGNMENT 0 YS2-9j14.q1k vc_5 394 62 37 36 C 333 0.00 433 reject_low 8 ALIGNMENT 0 YS2-9j14.p1k chr06 384 402 190307 190306 F 19 0.00 402 accept_chi 1 ALIGNMENT 0 YS2-9j14.q1k vc_7 62 395 13525 13524 F 334 0.00 433 reject_low 7 ALIGNMENT 41 YS2-9j14.q1k vc_3 433 393 2472 2512 C 41 100.00 433 reject_low 4 ALIGNMENT 336 YS2-9j14.p1k chr06 32 383 189956 190307 F 352 98.86 402 accept_chi 1 ALIGNMENT 0 YS2-9j14.q1k vc_4 62 392 5831 5830 F 331 0.00 433 reject_low 5 ALIGNMENT 41 YS2-9j14.q1k vc_2 433 393 2105 2145 C 41 100.00 433 reject_low 3 ALIGNMENT 41 YS2-9j14.q1k vc_4 393 433 5831 5871 F 41 100.00 433 reject_low 5 ALIGNMENT 0 YS2-9j14.q1k vc_5 394 62 5064 5063 C 333 0.00 433 reject_low 6 ALIGNMENT 0 YS2-9j14.q1k vc_1 392 62 2513 2512 C 331 0.00 433 reject_low 2 ALIGNMENT 41 YS2-9j14.q1k vc_1 433 393 2472 2512 C 41 100.00 433 reject_low 2 ALIGNMENT 38 YS2-9j14.q1k vc_7 396 433 13525 13562 F 38 100.00 433 reject_low 7 ALIGNMENT 0 YS2-9j14.q1k chr06 433 393 189951 189950 C 41 0.00 433 accept_chi 0 ALIGNMENT 897 YS2-9j15.q1k chr10 1073 34 716695 717724 C 1040 96.73 1259 ambiguous_tel 1 ALIGNMENT 930 YS2-9j15.p1k chr05 1115 36 220138 221204 C 1080 97.41 1262 accept 0 ALIGNMENT 959 YS2-9j16.p1k chr04 30 1231 775988 777181 F 1202 94.93 1237 accept 0 ALIGNMENT 842 YS2-9j16.q1k chr04 1023 36 780583 781560 C 988 96.56 1307 accept 0 ALIGNMENT 384 YS2-9j17.q1k chr16 52 842 7873 8670 F 791 84.20 1139 reject_low 14 ALIGNMENT 0 YS2-9j17.q1k chr01 62 91 176631 176630 F 30 0.00 1139 reject_low 19 ALIGNMENT 539 YS2-9j17.q1k chr15 30 1121 11465 12549 F 1092 84.62 1139 reject_low 10 ALIGNMENT 0 YS2-9j17.q1k chr04 730 511 1522981 1523199 C 220 0.00 1139 reject_low 21 ALIGNMENT 407 YS2-9j17.q1k chr07 579 85 1080211 1080705 C 495 94.34 1139 reject_low 16 ALIGNMENT 688 YS2-9j17.q1k chr03 1139 37 307137 308247 C 1103 88.21 1139 reject_low 4 ALIGNMENT 0 YS2-9j17.q1k chr08 62 84 11890 11889 F 23 0.00 1139 reject_low 11 ALIGNMENT 774 YS2-9j17.q1k chr02 30 925 7521 8416 F 896 96.09 1139 reject_low 7 ALIGNMENT 405 YS2-9j17.q1k chr02 579 37 808950 809489 C 543 92.27 1139 reject_low 15 ALIGNMENT 740 YS2-9j17.q1k chr07 63 1121 6237 7290 F 1059 90.46 1139 reject_low 5 ALIGNMENT 59 YS2-9j17.q1k chr03 505 308 289999 290193 C 198 78.79 1139 reject_low 20 ALIGNMENT 0 YS2-9j17.q1k chr12 961 995 13930 13978 F 35 0.00 1139 reject_low 12 ALIGNMENT 383 YS2-9j17.q1k chr15 914 52 1082397 1083268 C 863 82.85 1139 reject_low 13 ALIGNMENT 760 YS2-9j17.q1k chr12 30 960 12999 13929 F 931 94.20 1139 reject_low 12 ALIGNMENT 756 YS2-9j17.q1k chr12 1139 30 1062264 1063361 C 1110 90.45 1139 accept 0 ALIGNMENT 609 YS2-9j17.q1k chr11 30 1121 1720 2820 F 1092 85.99 1139 reject_low 8 ALIGNMENT 385 YS2-9j17.q1k chr04 510 30 1523200 1523687 C 481 93.97 1139 reject_low 21 ALIGNMENT 20 YS2-9j17.q1k chr12 996 1020 13979 14003 F 25 96.00 1139 reject_low 12 ALIGNMENT 0 YS2-9j17.q1k chr03 307 62 290194 290193 C 246 0.00 1139 reject_low 20 ALIGNMENT 0 YS2-9j17.q1k chr03 805 506 290000 289999 C 300 0.00 1139 reject_low 20 ALIGNMENT 0 YS2-9j17.q1k chr02 805 580 808951 808950 C 226 0.00 1139 reject_low 15 ALIGNMENT 20 YS2-9j17.q1k chr04 780 731 1522931 1522980 C 50 82.00 1139 reject_low 21 ALIGNMENT 365 YS2-9j17.q1k chr13 839 52 922281 923074 C 788 83.50 1139 reject_low 17 ALIGNMENT 773 YS2-9j17.q1k chr10 30 1121 8683 9777 F 1092 91.03 1139 reject_low 3 ALIGNMENT 718 YS2-9j17.q1k chr01 30 1092 1717 2778 F 1063 90.03 1139 reject_low 6 ALIGNMENT 610 YS2-9j17.q1k chr09 1121 50 433286 434362 C 1072 86.47 1139 reject_low 9 ALIGNMENT 575 YS2-9j17.q1k chr08 85 950 11890 12762 F 866 89.38 1139 reject_low 11 ALIGNMENT 773 YS2-9j17.q1k chr09 30 1121 8700 9794 F 1092 91.03 1139 reject_low 2 ALIGNMENT 0 YS2-9j17.q1k chr05 115 62 64091 64090 C 54 0.00 1139 reject_low 18 ALIGNMENT 0 YS2-9j17.q1k chr01 489 805 177031 177030 F 317 0.00 1139 reject_low 19 ALIGNMENT 0 YS2-9j17.q1k chr04 805 781 1522932 1522931 C 25 0.00 1139 reject_low 21 ALIGNMENT 833 YS2-9j17.q1k chr14 1121 30 781275 782364 C 1092 92.86 1139 reject_low 1 ALIGNMENT 0 YS2-9j17.q1k chr05 805 497 63711 63710 C 309 0.00 1139 reject_low 18 ALIGNMENT 324 YS2-9j17.q1k chr05 496 116 63710 64090 C 381 95.28 1139 reject_low 18 ALIGNMENT 0 YS2-9j17.q1k chr07 805 580 1080212 1080211 C 226 0.00 1139 reject_low 16 ALIGNMENT 215 YS2-9j17.q1k chr01 92 488 176631 177031 F 397 85.64 1139 reject_low 19 ALIGNMENT 942 YS2-9j17.p1k chr12 42 1163 1058369 1059486 F 1122 95.81 1166 accept 0 ALIGNMENT 0 YS2-9j17.q1k chr07 84 62 1080706 1080705 C 23 0.00 1139 reject_low 16 ALIGNMENT 42 YS2-9j19.p1k chr02 143 190 4696 4743 F 48 95.83 351 reject_low 12 ALIGNMENT 49 YS2-9j19.q1k chr08 294 234 4140 4200 C 61 95.08 377 reject_low 17 ALIGNMENT 0 YS2-9j19.q1k chr15 62 177 1085736 1085735 F 116 0.00 377 reject_low 37 ALIGNMENT 0 YS2-9j19.p1k chr11 351 335 666002 666001 C 17 0.00 351 reject_low 6 ALIGNMENT 49 YS2-9j19.q1k chr16 234 294 943708 943768 F 61 95.08 377 reject_low 39 ALIGNMENT 0 YS2-9j19.p1k chr15 142 134 1085783 1085808 C 9 0.00 351 reject_low 36 ALIGNMENT 0 YS2-9j19.q1k chr07 225 233 1085524 1085549 F 9 0.00 377 reject_low 15 ALIGNMENT 0 YS2-9j19.q1k chr10 176 62 5865 5864 C 115 0.00 377 reject_low 22 ALIGNMENT 42 YS2-9j19.p1k chr10 143 190 5817 5864 F 48 95.83 351 reject_low 21 ALIGNMENT 0 YS2-9j19.p1k chr02 191 351 4743 4742 F 161 0.00 351 reject_low 12 ALIGNMENT 49 YS2-9j19.q1k chr12 294 234 9943 10003 C 61 95.08 377 accept_tel 0 ALIGNMENT 0 YS2-9j19.p1k chr16 351 190 943636 943635 C 162 0.00 351 reject_low 38 ALIGNMENT 0 YS2-9j19.q1k chr07 295 377 1085610 1085609 F 83 0.00 377 reject_low 15 ALIGNMENT 0 YS2-9j19.q1k chr08 233 225 4201 4226 C 9 0.00 377 reject_low 17 ALIGNMENT 0 YS2-9j19.q1k chr16 225 233 943682 943707 F 9 0.00 377 reject_low 39 ALIGNMENT 0 YS2-9j19.q1k chr12 377 295 9944 9943 C 83 0.00 377 accept_tel 0 ALIGNMENT 49 YS2-9j19.q1k chr06 294 234 3446 3506 C 61 95.08 377 reject_low 35 ALIGNMENT 0 YS2-9j19.p1k chr06 190 351 3579 3578 F 162 0.00 351 reject_low 34 ALIGNMENT 0 YS2-9j19.q1k chr14 176 62 5493 5492 C 115 0.00 377 reject_low 29 ALIGNMENT 0 YS2-9j19.q1k chr12 295 377 1072905 1072904 F 83 0.00 377 reject_low 25 ALIGNMENT 49 YS2-9j19.p1k chr14 73 133 5358 5418 F 61 95.08 351 reject_low 28 ALIGNMENT 49 YS2-9j19.q1k chr15 234 294 1085809 1085869 F 61 95.08 377 reject_low 37 ALIGNMENT 0 YS2-9j19.p1k chr16 134 142 5328 5353 F 9 0.00 351 reject_low 30 ALIGNMENT 0 YS2-9j19.p1k chr12 274 351 5326 5325 F 78 0.00 351 accept_tel 0 ALIGNMENT 0 YS2-9j19.p1k chr05 191 351 5447 5446 F 161 0.00 351 reject_low 1 ALIGNMENT 49 YS2-9j19.p1k chr07 133 73 1085550 1085610 C 61 95.08 351 reject_low 14 ALIGNMENT 0 YS2-9j19.q1k chr10 377 295 5731 5730 C 83 0.00 377 reject_low 22 ALIGNMENT 41 YS2-9j19.p1k chr06 143 189 3533 3579 F 47 95.74 351 reject_low 34 ALIGNMENT 41 YS2-9j19.q1k chr04 178 224 1526571 1526617 F 47 95.74 377 reject_low 33 ALIGNMENT 0 YS2-9j19.p1k chr04 351 190 1526572 1526571 C 162 0.00 351 reject_low 32 ALIGNMENT 0 YS2-9j19.q1k chr12 225 233 1066267 1066292 F 9 0.00 377 reject_low 5 ALIGNMENT 49 YS2-9j19.q1k chr13 294 234 4284 4344 C 61 95.08 377 reject_low 27 ALIGNMENT 42 YS2-9j19.p1k chr08 143 190 4227 4274 F 48 95.83 351 reject_low 16 ALIGNMENT 49 YS2-9j19.q1k chr04 234 294 1526644 1526704 F 61 95.08 377 reject_low 33 ALIGNMENT 0 YS2-9j19.q1k chr02 377 295 4610 4609 C 83 0.00 377 reject_low 13 ALIGNMENT 0 YS2-9j19.q1k chr16 233 225 5328 5353 C 9 0.00 377 reject_low 31 ALIGNMENT 49 YS2-9j19.p1k chr16 73 133 5267 5327 F 61 95.08 351 reject_low 30 ALIGNMENT 49 YS2-9j19.p1k chr08 73 133 4140 4200 F 61 95.08 351 reject_low 16 ALIGNMENT 0 YS2-9j19.q1k chr08 295 377 558222 558221 F 83 0.00 377 reject_low 19 ALIGNMENT 41 YS2-9j19.p1k chr16 189 143 943635 943681 C 47 95.74 351 reject_low 38 ALIGNMENT 0 YS2-9j19.p1k chr08 142 134 558136 558161 C 9 0.00 351 reject_low 18 ALIGNMENT 49 YS2-9j19.q1k chr08 234 294 558162 558222 F 61 95.08 377 reject_low 19 ALIGNMENT 102 YS2-9j19.q1k chr05 177 294 571416 571533 F 118 95.76 377 reject_low 4 ALIGNMENT 38 YS2-9j19.q1k vc_7 340 377 13525 13562 F 38 100.00 377 reject_low 11 ALIGNMENT 49 YS2-9j19.q1k chr16 294 234 5267 5327 C 61 95.08 377 reject_low 31 ALIGNMENT 0 YS2-9j19.p1k chr07 351 191 1085477 1085476 C 161 0.00 351 reject_low 14 ALIGNMENT 0 YS2-9j19.q1k chr12 62 176 1066219 1066218 F 115 0.00 377 reject_low 5,25 ALIGNMENT 0 YS2-9j19.q1k chr08 62 176 558088 558087 F 115 0.00 377 reject_low 19 ALIGNMENT 41 YS2-9j19.q1k vc_4 337 377 5831 5871 F 41 100.00 377 reject_low 10 ALIGNMENT 0 YS2-9j19.p1k chr02 134 142 4670 4695 F 9 0.00 351 reject_low 12 ALIGNMENT 0 YS2-9j19.q1k chr08 176 62 4275 4274 C 115 0.00 377 reject_low 17 ALIGNMENT 0 YS2-9j19.p1k chr04 142 134 1526618 1526643 C 9 0.00 351 reject_low 32 ALIGNMENT 49 YS2-9j19.q1k chr12 234 294 1066293 1066353 F 61 95.08 377 reject_low 5 ALIGNMENT 30 YS2-9j19.p1k chr11 334 286 666001 666048 C 49 89.80 351 reject_low 6 ALIGNMENT 42 YS2-9j19.q1k chr02 224 177 4696 4743 C 48 95.83 377 reject_low 13 ALIGNMENT 42 YS2-9j19.q1k chr08 224 177 4227 4274 C 48 95.83 377 reject_low 17 ALIGNMENT 0 YS2-9j19.q1k chr12 93 62 5327 5326 C 32 0.00 377 reject_low 7 ALIGNMENT 0 YS2-9j19.q1k chr13 377 295 4285 4284 C 83 0.00 377 reject_low 27 ALIGNMENT 41 YS2-9j19.p1k chr04 189 143 1526571 1526617 C 47 95.74 351 reject_low 32 ALIGNMENT 42 YS2-9j19.q1k chr12 224 177 10030 10077 C 48 95.83 377 accept_tel 0 ALIGNMENT 42 YS2-9j19.q1k chr16 224 177 5354 5401 C 48 95.83 377 reject_low 31 ALIGNMENT 0 YS2-9j19.p1k chr10 134 142 5791 5816 F 9 0.00 351 reject_low 21 ALIGNMENT 49 YS2-9j19.q1k chr12 294 234 4408 4468 C 61 95.08 377 reject_low 7 ALIGNMENT 49 YS2-9j19.p1k chr02 73 133 4609 4669 F 61 95.08 351 reject_low 12 ALIGNMENT 0 YS2-9j19.p1k chr06 134 142 3507 3532 F 9 0.00 351 reject_low 34 ALIGNMENT 0 YS2-9j19.q1k chr12 176 62 10078 10077 C 115 0.00 377 accept_tel 0 ALIGNMENT 0 YS2-9j19.q1k chr12 225 377 1072818 1072817 F 153 0.00 377 reject_low 8 ALIGNMENT 0 YS2-9j19.p1k chr12 351 191 1066220 1066219 C 161 0.00 351 reject_low 24 ALIGNMENT 0 YS2-9j19.q1k chr05 295 377 571533 571532 F 83 0.00 377 reject_low 4 ALIGNMENT 0 YS2-9j19.p1k chr12 134 142 4469 4494 F 9 0.00 351 accept_tel 0 ALIGNMENT 0 YS2-9j19.p1k chr13 134 142 4345 4370 F 9 0.00 351 reject_low 26 ALIGNMENT 42 YS2-9j19.q1k chr08 177 224 558088 558135 F 48 95.83 377 reject_low 19 ALIGNMENT 102 YS2-9j19.q1k chr05 294 177 5330 5447 C 118 95.76 377 reject_low 3 ALIGNMENT 0 YS2-9j19.p1k chr12 351 274 1071987 1071986 C 78 0.00 351 reject_low 5 ALIGNMENT 49 YS2-9j19.p1k chr04 133 73 1526644 1526704 C 61 95.08 351 reject_low 32 ALIGNMENT 0 YS2-9j19.q1k chr16 62 177 943635 943634 F 116 0.00 377 reject_low 39 ALIGNMENT 0 YS2-9j19.q1k chr16 176 62 5402 5401 C 115 0.00 377 reject_low 31 ALIGNMENT 0 YS2-9j19.p1k chr05 351 191 571417 571416 C 161 0.00 351 reject_low 2 ALIGNMENT 49 YS2-9j19.q1k chr07 234 294 1085550 1085610 F 61 95.08 377 reject_low 15 ALIGNMENT 0 YS2-9j19.p1k chr16 191 351 5401 5400 F 161 0.00 351 reject_low 30 ALIGNMENT 42 YS2-9j19.p1k chr08 190 143 558088 558135 C 48 95.83 351 reject_low 18 ALIGNMENT 42 YS2-9j19.q1k chr12 224 177 4495 4542 C 48 95.83 377 reject_low 7 ALIGNMENT 0 YS2-9j19.p1k chr15 351 190 1085737 1085736 C 162 0.00 351 reject_low 36 ALIGNMENT 0 YS2-9j19.p1k chr09 134 142 5808 5833 F 9 0.00 351 reject_low 20 ALIGNMENT 42 YS2-9j19.p1k chr09 143 190 5834 5881 F 48 95.83 351 reject_low 20 ALIGNMENT 31 YS2-9j19.q1k chr12 142 94 5278 5326 C 49 89.80 377 reject_low 7 ALIGNMENT 42 YS2-9j19.q1k chr12 177 224 1066219 1066266 F 48 95.83 377 reject_low 5,25 ALIGNMENT 0 YS2-9j19.q1k chr14 377 295 5359 5358 C 83 0.00 377 reject_low 29 ALIGNMENT 0 YS2-9j19.q1k chr16 377 295 5268 5267 C 83 0.00 377 reject_low 31 ALIGNMENT 42 YS2-9j19.q1k chr07 177 224 1085476 1085523 F 48 95.83 377 reject_low 15 ALIGNMENT 49 YS2-9j19.p1k chr12 73 133 9943 10003 F 61 95.08 351 reject_low 23 ALIGNMENT 0 YS2-9j19.q1k chr12 295 377 1066353 1066352 F 83 0.00 377 reject_low 5 ALIGNMENT 0 YS2-9j19.q1k chr15 225 233 1085783 1085808 F 9 0.00 377 reject_low 37 ALIGNMENT 0 YS2-9j19.q1k chr04 225 233 1526618 1526643 F 9 0.00 377 reject_low 33 ALIGNMENT 0 YS2-9j19.q1k chr06 177 62 3580 3579 C 116 0.00 377 reject_low 35 ALIGNMENT 0 YS2-9j19.q1k chr02 176 62 4744 4743 C 115 0.00 377 reject_low 13 ALIGNMENT 0 YS2-9j19.q1k vc_7 62 339 13525 13524 F 278 0.00 377 reject_low 11 ALIGNMENT 41 YS2-9j19.p1k chr15 189 143 1085736 1085782 C 47 95.74 351 reject_low 36 ALIGNMENT 49 YS2-9j19.p1k chr12 133 73 1072845 1072905 C 61 95.08 351 reject_low 5 ALIGNMENT 0 YS2-9j19.q1k chr12 62 93 1071986 1071985 F 32 0.00 377 reject_low 8 ALIGNMENT 0 YS2-9j19.q1k chr05 62 176 571416 571415 F 115 0.00 377 reject_low 4 ALIGNMENT 31 YS2-9j19.p1k chr12 225 273 5278 5326 F 49 89.80 351 accept_tel 0 ALIGNMENT 41 YS2-9j19.q1k chr06 224 178 3533 3579 C 47 95.74 377 reject_low 35 ALIGNMENT 0 YS2-9j19.q1k chr06 377 295 3447 3446 C 83 0.00 377 reject_low 35 ALIGNMENT 42 YS2-9j19.p1k chr14 143 190 5445 5492 F 48 95.83 351 reject_low 28 ALIGNMENT 0 YS2-9j19.q1k vc_4 62 336 5831 5830 F 275 0.00 377 reject_low 10 ALIGNMENT 0 YS2-9j19.p1k chr16 142 134 943682 943707 C 9 0.00 351 reject_low 38 ALIGNMENT 31 YS2-9j19.q1k chr12 94 142 1071986 1072034 F 49 89.80 377 reject_low 8 ALIGNMENT 0 YS2-9j19.q1k chr12 176 143 4543 5277 C 34 0.00 377 reject_low 7 ALIGNMENT 49 YS2-9j19.q1k chr10 294 234 5730 5790 C 61 95.08 377 reject_low 22 ALIGNMENT 0 YS2-9j19.q1k chr12 225 233 1066267 1072844 F 9 0.00 377 reject_low 25 ALIGNMENT 31 YS2-9j19.p1k chr12 273 225 1071986 1072034 C 49 89.80 351 reject_low 5 ALIGNMENT 49 YS2-9j19.p1k chr10 73 133 5730 5790 F 61 95.08 351 reject_low 21 ALIGNMENT 49 YS2-9j19.p1k chr12 73 133 4408 4468 F 61 95.08 351 accept_tel 0 ALIGNMENT 0 YS2-9j19.q1k chr13 176 62 4419 4418 C 115 0.00 377 reject_low 27 ALIGNMENT 0 YS2-9j19.p1k chr08 134 142 4201 4226 F 9 0.00 351 reject_low 16 ALIGNMENT 49 YS2-9j19.q1k chr02 294 234 4609 4669 C 61 95.08 377 reject_low 13 ALIGNMENT 41 YS2-9j19.q1k chr16 178 224 943635 943681 F 47 95.74 377 reject_low 39 ALIGNMENT 41 YS2-9j19.q1k vc_3 377 337 2472 2512 C 41 100.00 377 reject_low 9 ALIGNMENT 41 YS2-9j19.p1k chr12 189 143 1072772 1072818 C 47 95.74 351 reject_low 5 ALIGNMENT 0 YS2-9j19.q1k chr14 233 225 5419 5444 C 9 0.00 377 reject_low 29 ALIGNMENT 102 YS2-9j19.p1k chr05 73 190 5330 5447 F 118 95.76 351 reject_low 1 ALIGNMENT 42 YS2-9j19.p1k chr12 190 143 1066219 1066266 C 48 95.83 351 reject_low 24 ALIGNMENT 0 YS2-9j19.q1k chr04 62 177 1526571 1526570 F 116 0.00 377 reject_low 33 ALIGNMENT 49 YS2-9j19.p1k chr08 133 73 558162 558222 C 61 95.08 351 reject_low 18 ALIGNMENT 0 YS2-9j19.q1k chr15 295 377 1085869 1085868 F 83 0.00 377 reject_low 37 ALIGNMENT 49 YS2-9j19.p1k chr15 133 73 1085809 1085869 C 61 95.08 351 reject_low 36 ALIGNMENT 42 YS2-9j19.q1k chr14 224 177 5445 5492 C 48 95.83 377 reject_low 29 ALIGNMENT 0 YS2-9j19.q1k chr05 377 295 5331 5330 C 83 0.00 377 reject_low 3 ALIGNMENT 42 YS2-9j19.p1k chr16 143 190 5354 5401 F 48 95.83 351 reject_low 30 ALIGNMENT 41 YS2-9j19.q1k chr12 178 224 1072772 1072818 F 47 95.74 377 reject_low 8 ALIGNMENT 42 YS2-9j19.p1k chr12 143 190 4495 4542 F 48 95.83 351 accept_tel 0 ALIGNMENT 42 YS2-9j19.p1k chr12 143 190 10030 10077 F 48 95.83 351 reject_low 23 ALIGNMENT 0 YS2-9j19.q1k chr08 225 233 558136 558161 F 9 0.00 377 reject_low 19 ALIGNMENT 42 YS2-9j19.q1k chr10 224 177 5817 5864 C 48 95.83 377 reject_low 22 ALIGNMENT 0 YS2-9j19.q1k vc_3 336 62 2513 2512 C 275 0.00 377 reject_low 9 ALIGNMENT 0 YS2-9j19.q1k chr12 233 225 10004 10029 C 9 0.00 377 accept_tel 0 ALIGNMENT 42 YS2-9j19.p1k chr13 143 190 4371 4418 F 48 95.83 351 reject_low 26 ALIGNMENT 0 YS2-9j19.p1k chr08 351 191 558089 558088 C 161 0.00 351 reject_low 18 ALIGNMENT 0 YS2-9j19.q1k chr04 295 377 1526704 1526703 F 83 0.00 377 reject_low 33 ALIGNMENT 49 YS2-9j19.q1k chr14 294 234 5358 5418 C 61 95.08 377 reject_low 29 ALIGNMENT 49 YS2-9j19.p1k chr09 73 133 5747 5807 F 61 95.08 351 reject_low 20 ALIGNMENT 0 YS2-9j19.p1k chr12 142 134 1072819 1072844 C 9 0.00 351 reject_low 5 ALIGNMENT 0 YS2-9j19.p1k chr07 142 134 1085524 1085549 C 9 0.00 351 reject_low 14 ALIGNMENT 0 YS2-9j19.p1k chr13 191 351 4418 4417 F 161 0.00 351 reject_low 26 ALIGNMENT 0 YS2-9j19.q1k chr08 377 295 4141 4140 C 83 0.00 377 reject_low 17 ALIGNMENT 0 YS2-9j19.p1k chr12 191 351 10077 10076 F 161 0.00 351 reject_low 23 ALIGNMENT 49 YS2-9j19.p1k chr12 133 73 1066293 1066353 C 61 95.08 351 reject_low 24 ALIGNMENT 0 YS2-9j19.p1k chr14 134 142 5419 5444 F 9 0.00 351 reject_low 28 ALIGNMENT 0 YS2-9j19.q1k chr07 62 176 1085476 1085475 F 115 0.00 377 reject_low 15 ALIGNMENT 0 YS2-9j19.p1k chr09 191 351 5881 5880 F 161 0.00 351 reject_low 20 ALIGNMENT 0 YS2-9j19.q1k chr05 176 62 5448 5447 C 115 0.00 377 reject_low 3 ALIGNMENT 0 YS2-9j19.q1k chr13 233 225 4345 4370 C 9 0.00 377 reject_low 27 ALIGNMENT 49 YS2-9j19.q1k chr12 234 294 1072845 1072905 F 61 95.08 377 reject_low 25 ALIGNMENT 0 YS2-9j19.q1k chr02 233 225 4670 4695 C 9 0.00 377 reject_low 13 ALIGNMENT 42 YS2-9j19.q1k chr13 224 177 4371 4418 C 48 95.83 377 reject_low 27 ALIGNMENT 49 YS2-9j19.p1k chr06 73 133 3446 3506 F 61 95.08 351 reject_low 34 ALIGNMENT 0 YS2-9j19.p1k chr11 285 62 666049 666048 C 224 0.00 351 reject_low 6 ALIGNMENT 0 YS2-9j19.p1k chr10 191 351 5864 5863 F 161 0.00 351 reject_low 21 ALIGNMENT 41 YS2-9j19.q1k chr15 178 224 1085736 1085782 F 47 95.74 377 reject_low 37 ALIGNMENT 49 YS2-9j19.p1k chr16 133 73 943708 943768 C 61 95.08 351 reject_low 38 ALIGNMENT 0 YS2-9j19.p1k chr14 191 351 5492 5491 F 161 0.00 351 reject_low 28 ALIGNMENT 0 YS2-9j19.q1k chr12 377 295 4409 4408 C 83 0.00 377 reject_low 7 ALIGNMENT 0 YS2-9j19.q1k chr10 233 225 5791 5816 C 9 0.00 377 reject_low 22 ALIGNMENT 0 YS2-9j19.q1k chr12 233 225 4469 4494 C 9 0.00 377 reject_low 7 ALIGNMENT 0 YS2-9j19.p1k chr12 142 134 1066267 1066292 C 9 0.00 351 reject_low 24 ALIGNMENT 102 YS2-9j19.p1k chr05 190 73 571416 571533 C 118 95.76 351 reject_low 2 ALIGNMENT 0 YS2-9j19.q1k chr16 295 377 943768 943767 F 83 0.00 377 reject_low 39 ALIGNMENT 0 YS2-9j19.p1k chr12 191 224 4543 5277 F 34 0.00 351 accept_tel 0 ALIGNMENT 49 YS2-9j19.p1k chr13 73 133 4284 4344 F 61 95.08 351 reject_low 26 ALIGNMENT 0 YS2-9j19.q1k chr12 143 177 1072035 1072771 F 35 0.00 377 reject_low 8 ALIGNMENT 42 YS2-9j19.p1k chr07 190 143 1085476 1085523 C 48 95.83 351 reject_low 14 ALIGNMENT 0 YS2-9j19.p1k chr08 191 351 4274 4273 F 161 0.00 351 reject_low 16 ALIGNMENT 0 YS2-9j19.p1k chr12 224 190 1072035 1072771 C 35 0.00 351 reject_low 5 ALIGNMENT 0 YS2-9j19.q1k chr06 233 225 3507 3532 C 9 0.00 377 reject_low 35 ALIGNMENT 0 YS2-9j19.p1k chr12 134 142 10004 10029 F 9 0.00 351 reject_low 23 ALIGNMENT 874 YS2-9j20.p1k chr03 964 32 293028 293962 C 933 99.36 1164 reject_low 1 ALIGNMENT 0 YS2-9j20.p1k chr03 261 62 200099 200098 C 200 0.00 1164 accept 0 ALIGNMENT 761 YS2-9j20.p1k chr03 1164 262 12033 12943 C 903 96.23 1164 reject_low 2 ALIGNMENT 979 YS2-9j20.q1k chr03 37 1169 193927 195047 F 1133 96.56 1170 accept 0 ALIGNMENT 0 YS2-9j20.p1k chr03 261 62 12944 12943 C 200 0.00 1164 reject_low 2 ALIGNMENT 0 YS2-9j20.q1k chr10 658 62 63340 63339 C 597 0.00 1170 reject_low 3 ALIGNMENT 771 YS2-9j20.p1k chr03 1164 262 199190 200098 C 903 96.57 1164 accept 0 ALIGNMENT 90 YS2-9j20.q1k chr10 1047 659 62955 63339 C 389 75.06 1170 reject_low 3 ALIGNMENT 898 YS2-9j21.q1k chr09 1128 39 415193 416305 C 1090 94.77 1151 accept 0 ALIGNMENT 988 YS2-9j21.p1k chr09 30 1166 412436 413574 F 1137 96.31 1171 accept 0 ALIGNMENT 1022 YS2-9j22.q1k chr13 30 1154 156202 157326 F 1125 97.42 1160 accept 0 ALIGNMENT 842 YS2-9j22.p1k chr13 965 24 156613 157568 C 942 97.24 1115 accept 0 ALIGNMENT 919 YS2-9j24.p1k chr12 1088 43 862140 863188 C 1046 96.56 1127 accept 0 ALIGNMENT 968 YS2-9j24.q1k chr12 51 1130 858912 859991 F 1080 97.04 1171 accept 0 ALIGNMENT 973 YS2-9k01.p1k chr04 34 1171 395325 396461 F 1138 96.22 1182 accept 0 ALIGNMENT 1040 YS2-9k01.q1k chr04 1272 40 399175 400403 C 1233 95.62 1325 accept 0 ALIGNMENT 921 YS2-9k02.p1k chr14 1155 32 600604 601738 C 1124 94.75 1168 manual 1 ALIGNMENT 749 YS2-9k02.q1k chr14 43 1086 599613 600654 F 1044 91.76 1177 manual 1 ALIGNMENT 924 YS2-9k02.p1k chr14 32 1155 570515 571649 F 1124 95.02 1168 manual 0 ALIGNMENT 758 YS2-9k02.q1k chr14 1086 38 571599 572622 C 1049 92.37 1177 manual 0 ALIGNMENT 161 YS2-9k04.p1k vc_4 404 57 5302 5651 C 348 83.33 1306 reject_low 2 ALIGNMENT 31 YS2-9k04.p1k vc_7 404 358 4653 4699 C 47 89.36 1306 reject_low 6 ALIGNMENT 0 YS2-9k04.p1k vc_7 357 356 4700 4922 C 2 0.00 1306 reject_low 6 ALIGNMENT 114 YS2-9k04.p1k vc_7 355 125 4923 5153 C 231 83.98 1306 reject_low 6 ALIGNMENT 181 YS2-9k04.p1k vc_7 599 57 2027 2566 C 543 79.01 1306 reject_vc 1 ALIGNMENT 181 YS2-9k04.p1k vc_5 57 599 2559 3098 F 543 79.19 1306 reject_vc 0 ALIGNMENT 137 YS2-9k04.p1k vc_3 57 355 2692 2990 F 299 83.28 1306 reject_low 4 ALIGNMENT 42 YS2-9k04.p1k vc_4 361 599 1879 2114 F 239 73.64 1306 reject_low 5 ALIGNMENT 137 YS2-9k04.p1k vc_1 57 355 2692 2990 F 299 83.28 1306 reject_low 3 ALIGNMENT 809 YS2-9k05.p1k chr02 26 1080 52368 53424 F 1055 93.74 1126 accept 0 ALIGNMENT 1028 YS2-9k05.q1k chr02 1217 38 56875 58064 C 1180 97.12 1284 accept 0 ALIGNMENT 47 YS2-9k06.q1k chrm 315 248 80497 80564 C 68 91.18 1232 reject_low 7 ALIGNMENT 811 YS2-9k06.p1k chrm 28 1114 41169 42261 F 1087 96.96 1200 accept 0 ALIGNMENT 113 YS2-9k06.p1k chr10 176 28 6998 7146 C 149 100.00 1200 reject_low 3 ALIGNMENT 0 YS2-9k06.p1k chr10 852 177 6999 6998 C 676 0.00 1200 reject_low 3 ALIGNMENT 0 YS2-9k06.q1k chrm 62 267 67947 67946 F 206 0.00 1232 reject_low 12 ALIGNMENT 814 YS2-9k06.q1k chrm 1181 37 42239 43369 C 1145 96.16 1232 accept 0 ALIGNMENT 0 YS2-9k06.q1k chrm 313 776 67991 67990 F 464 0.00 1232 reject_low 12 ALIGNMENT 34 YS2-9k06.q1k chrm 311 268 9030 9073 C 44 95.45 1232 reject_low 11 ALIGNMENT 0 YS2-9k06.q1k chrm 776 316 80498 80497 C 461 0.00 1232 reject_low 7 ALIGNMENT 0 YS2-9k06.q1k chr01 604 580 189272 189266 C 25 0.00 1232 reject_low 4 ALIGNMENT 0 YS2-9k06.q1k chrm 776 315 77668 77667 C 462 0.00 1232 reject_low 8 ALIGNMENT 0 YS2-9k06.p1k chrm 62 401 21233 21232 F 340 0.00 1200 reject_low 1 ALIGNMENT 37 YS2-9k06.q1k chr01 666 605 189210 189271 C 62 95.16 1232 reject_low 4 ALIGNMENT 34 YS2-9k06.q1k chr07 666 605 404797 404858 C 62 93.55 1232 reject_low 5 ALIGNMENT 0 YS2-9k06.q1k chr07 497 62 404937 404936 C 436 0.00 1232 reject_low 5 ALIGNMENT 113 YS2-9k06.p1k chr09 176 28 7015 7163 C 149 100.00 1200 reject_low 2 ALIGNMENT 0 YS2-9k06.q1k chrm 267 62 9074 9073 C 206 0.00 1232 reject_low 11 ALIGNMENT 68 YS2-9k06.q1k chr01 579 498 189267 189349 C 82 98.78 1232 reject_low 4 ALIGNMENT 0 YS2-9k06.q1k chr07 776 667 404798 404797 C 110 0.00 1232 reject_low 5 ALIGNMENT 68 YS2-9k06.q1k chr07 579 498 404854 404936 C 82 98.78 1232 reject_low 5 ALIGNMENT 39 YS2-9k06.q1k chrm 311 262 11045 11094 C 50 94.00 1232 reject_low 10 ALIGNMENT 0 YS2-9k06.p1k chr09 852 177 7016 7015 C 676 0.00 1200 reject_low 2 ALIGNMENT 0 YS2-9k06.q1k chrm 247 62 80565 80564 C 186 0.00 1232 reject_low 7 ALIGNMENT 0 YS2-9k06.q1k chrm 247 62 77735 77734 C 186 0.00 1232 reject_low 8 ALIGNMENT 39 YS2-9k06.q1k chrm 262 311 9484 9533 F 50 94.00 1232 reject_low 9 ALIGNMENT 0 YS2-9k06.q1k chrm 261 62 11095 11094 C 200 0.00 1232 reject_low 10 ALIGNMENT 0 YS2-9k06.q1k chrm 236 62 11577 11576 C 175 0.00 1232 reject_low 6 ALIGNMENT 33 YS2-9k06.q1k chrm 268 312 67947 67991 F 45 93.33 1232 reject_low 12 ALIGNMENT 0 YS2-9k06.q1k chrm 776 312 11046 11045 C 465 0.00 1232 reject_low 10 ALIGNMENT 0 YS2-9k06.q1k chrm 62 261 9484 9483 F 200 0.00 1232 reject_low 9 ALIGNMENT 0 YS2-9k06.q1k chr01 776 667 189211 189210 C 110 0.00 1232 reject_low 4 ALIGNMENT 138 YS2-9k06.p1k chrm 402 929 21233 21751 F 528 80.68 1200 reject_low 1 ALIGNMENT 0 YS2-9k06.q1k chrm 776 324 11494 11493 C 453 0.00 1232 reject_low 6 ALIGNMENT 0 YS2-9k06.q1k chr07 604 580 404859 404853 C 25 0.00 1232 reject_low 5 ALIGNMENT 0 YS2-9k06.q1k chrm 312 776 9533 9532 F 465 0.00 1232 reject_low 9 ALIGNMENT 44 YS2-9k06.q1k chrm 323 237 11493 11576 C 87 86.21 1232 reject_low 6 ALIGNMENT 45 YS2-9k06.q1k chrm 314 248 77667 77734 C 67 89.55 1232 reject_low 8 ALIGNMENT 0 YS2-9k06.q1k chr01 497 62 189350 189349 C 436 0.00 1232 reject_low 4 ALIGNMENT 0 YS2-9k06.q1k chrm 776 312 9031 9030 C 465 0.00 1232 reject_low 11 ALIGNMENT 950 YS2-9k07.q1k chr15 34 1089 838174 839244 F 1056 97.92 1307 accept 0 ALIGNMENT 962 YS2-9k07.p1k chr15 1187 36 841993 843150 C 1152 95.31 1211 accept 0 ALIGNMENT 965 YS2-9k08.q1k chr10 39 1175 501155 502297 F 1137 96.66 1197 accept 0 ALIGNMENT 975 YS2-9k08.p1k chr10 1131 34 504672 505786 C 1098 97.09 1203 accept 0 ALIGNMENT 902 YS2-9k10.p1k chr05 1164 30 17255 18407 C 1135 94.71 1175 accept 0 ALIGNMENT 946 YS2-9k10.q1k chr05 39 1200 12533 13682 F 1162 95.35 1208 accept 0 ALIGNMENT 877 YS2-9k12.p1k chr02 28 1088 739480 740558 F 1061 95.29 1168 accept 0 ALIGNMENT 974 YS2-9k12.q1k chr02 1172 35 743579 744710 C 1138 96.22 1238 accept 0 ALIGNMENT 28 YS2-9k13.p1k chr16 142 59 786294 786376 C 84 78.57 1215 reject_low 1 ALIGNMENT 0 YS2-9k13.p1k chr16 670 143 786295 786294 C 528 0.00 1215 reject_low 1 ALIGNMENT 733 YS2-9k13.p1k chr16 1028 59 785364 786319 C 970 93.61 1215 accept 0 ALIGNMENT 0 YS2-9k14.p1k chrm 150 62 77718 77717 C 89 0.00 466 reject_low 6 ALIGNMENT 0 YS2-9k14.q1k chrm 310 492 2120 2119 F 183 0.00 492 reject_low 5 ALIGNMENT 0 YS2-9k14.q1k chrm 492 330 12266 12265 C 163 0.00 492 reject_low 15 ALIGNMENT 49 YS2-9k14.p1k chrm 219 131 34265 34352 C 89 87.64 466 ambiguous 1 ALIGNMENT 0 YS2-9k14.q1k chrm 344 492 10806 10805 F 149 0.00 492 reject_low 11 ALIGNMENT 0 YS2-9k14.p1k chrm 466 199 83053 83052 C 268 0.00 466 reject_low 14 ALIGNMENT 0 YS2-9k14.q1k chrm 245 62 33531 33530 C 184 0.00 492 reject_low 13 ALIGNMENT 0 YS2-9k14.q1k chrm 330 492 76640 76639 F 163 0.00 492 reject_low 6 ALIGNMENT 0 YS2-9k14.p1k chrm 199 466 12312 12311 F 268 0.00 466 reject_low 12 ALIGNMENT 45 YS2-9k14.p1k chrm 207 151 77662 77717 C 57 94.74 466 reject_low 6 ALIGNMENT 39 YS2-9k14.q1k chrm 200 329 34857 34980 F 130 82.31 492 reject_low 8 ALIGNMENT 51 YS2-9k14.p1k chrm 200 137 10742 10806 C 64 93.75 466 reject_low 4 ALIGNMENT 0 YS2-9k14.p1k chrm 466 199 84487 84486 C 268 0.00 466 reject_low 7 ALIGNMENT 0 YS2-9k14.q1k chrm 330 492 34980 34979 F 163 0.00 492 reject_low 8 ALIGNMENT 0 YS2-9k14.q1k chrm 492 326 33450 33449 C 167 0.00 492 reject_low 13 ALIGNMENT 0 YS2-9k14.q1k chrm 350 492 34352 34351 F 143 0.00 492 reject_low 9 ALIGNMENT 39 YS2-9k14.q1k chrm 325 246 33449 33530 C 80 85.00 492 reject_low 13 ALIGNMENT 39 YS2-9k14.p1k chrm 198 153 83052 83097 C 46 97.83 466 reject_low 14 ALIGNMENT 45 YS2-9k14.q1k chrm 282 329 84486 84533 F 48 100.00 492 reject_low 16 ALIGNMENT 45 YS2-9k14.q1k chrm 329 282 12265 12312 C 48 100.00 492 reject_low 15 ALIGNMENT 0 YS2-9k14.q1k chrm 328 492 9075 9074 F 165 0.00 492 reject_low 4 ALIGNMENT 0 YS2-9k14.q1k chrm 330 492 84533 84532 F 163 0.00 492 reject_low 16 ALIGNMENT 0 YS2-9k14.q1k chrm 62 281 83052 83051 F 220 0.00 492 reject_low 17 ALIGNMENT 0 YS2-9k14.q1k chrm 328 492 83097 83096 F 165 0.00 492 reject_low 17 ALIGNMENT 0 YS2-9k14.p1k chrm 466 208 77663 77662 C 259 0.00 466 reject_low 6 ALIGNMENT 0 YS2-9k14.q1k chrm 281 62 12313 12312 C 220 0.00 492 reject_low 15 ALIGNMENT 0 YS2-9k14.q1k chrm 62 280 2092 2091 F 219 0.00 492 reject_low 5 ALIGNMENT 44 YS2-9k14.q1k chrm 240 327 8988 9075 F 88 85.23 492 reject_low 4 ALIGNMENT 44 YS2-9k14.p1k chrm 240 153 8988 9075 C 88 85.23 466 reject_low 5 ALIGNMENT 308 YS2-9k14.p1k chrm 448 29 29588 30007 C 420 99.29 466 ambiguous 0 ALIGNMENT 0 YS2-9k14.q1k chrm 62 260 34265 34264 F 199 0.00 492 reject_low 9 ALIGNMENT 0 YS2-9k14.q1k chrm 62 258 76572 76571 F 197 0.00 492 reject_low 6 ALIGNMENT 0 YS2-9k14.p1k chrm 150 62 84534 84533 C 89 0.00 466 reject_low 7 ALIGNMENT 45 YS2-9k14.p1k chrm 151 198 12265 12312 F 48 100.00 466 reject_low 12 ALIGNMENT 0 YS2-9k14.q1k vc_7 62 454 13525 13524 F 393 0.00 492 reject_low 3 ALIGNMENT 0 YS2-9k14.p1k chrm 130 62 34353 34352 C 69 0.00 466 ambiguous 1 ALIGNMENT 49 YS2-9k14.q1k chrm 261 349 34265 34352 F 89 87.64 492 reject_low 9 ALIGNMENT 38 YS2-9k14.q1k vc_7 455 492 13525 13562 F 38 100.00 492 reject_low 3 ALIGNMENT 0 YS2-9k14.q1k vc_4 62 451 5831 5830 F 390 0.00 492 reject_low 2 ALIGNMENT 45 YS2-9k14.q1k chrm 273 329 77662 77717 F 57 94.74 492 reject_low 7 ALIGNMENT 308 YS2-9k14.q1k chrm 32 451 29588 30007 F 420 99.29 492 ambiguous 1 ALIGNMENT 0 YS2-9k14.p1k chrm 62 150 12265 12264 F 89 0.00 466 reject_low 12 ALIGNMENT 0 YS2-9k14.p1k chrm 466 220 34266 34265 C 247 0.00 466 ambiguous 1 ALIGNMENT 39 YS2-9k14.q1k chrm 282 327 83052 83097 F 46 97.83 492 reject_low 17 ALIGNMENT 0 YS2-9k14.q1k chrm 62 199 34857 34856 F 138 0.00 492 reject_low 8 ALIGNMENT 0 YS2-9k14.q1k chrm 330 492 77717 77716 F 163 0.00 492 reject_low 7 ALIGNMENT 0 YS2-9k14.p1k chrm 466 241 8989 8988 C 226 0.00 466 reject_low 5 ALIGNMENT 0 YS2-9k14.p1k chrm 466 449 29589 29588 C 18 0.00 466 ambiguous 0 ALIGNMENT 0 YS2-9k14.p1k chrm 466 222 76573 76572 C 245 0.00 466 reject_low 10 ALIGNMENT 52 YS2-9k14.q1k chrm 259 329 76572 76640 F 71 92.96 492 reject_low 6 ALIGNMENT 0 YS2-9k14.p1k chrm 136 62 10807 10806 C 75 0.00 466 reject_low 4 ALIGNMENT 45 YS2-9k14.p1k chrm 198 151 84486 84533 C 48 100.00 466 reject_low 7 ALIGNMENT 0 YS2-9k14.q1k chrm 62 279 10742 10741 F 218 0.00 492 reject_low 11 ALIGNMENT 0 YS2-9k14.p1k chrm 152 62 83098 83097 C 91 0.00 466 reject_low 14 ALIGNMENT 0 YS2-9k14.q1k chrm 452 492 30007 30006 F 41 0.00 492 ambiguous 1 ALIGNMENT 0 YS2-9k14.p1k chrm 466 201 10743 10742 C 266 0.00 466 reject_low 4 ALIGNMENT 0 YS2-9k14.q1k chrm 62 239 8988 8987 F 178 0.00 492 reject_low 4 ALIGNMENT 0 YS2-9k14.p1k chrm 152 62 9076 9075 C 91 0.00 466 reject_low 5 ALIGNMENT 0 YS2-9k14.p1k chrm 150 62 76641 76640 C 89 0.00 466 reject_low 10 ALIGNMENT 0 YS2-9k14.q1k chrm 62 281 84486 84485 F 220 0.00 492 reject_low 16 ALIGNMENT 41 YS2-9k14.q1k vc_4 452 492 5831 5871 F 41 100.00 492 reject_low 2 ALIGNMENT 51 YS2-9k14.q1k chrm 280 343 10742 10806 F 64 93.75 492 reject_low 11 ALIGNMENT 52 YS2-9k14.p1k chrm 221 151 76572 76640 C 71 92.96 466 reject_low 10 ALIGNMENT 0 YS2-9k14.q1k chrm 62 272 77662 77661 F 211 0.00 492 reject_low 7 ALIGNMENT 27 YS2-9k14.q1k chrm 281 309 2092 2120 F 29 100.00 492 reject_low 5 ALIGNMENT 966 YS2-9k15.p1k chr07 1151 38 655162 656282 C 1114 96.68 1211 accept 0 ALIGNMENT 1114 YS2-9k15.q1k chr07 31 1282 653364 654616 F 1252 97.04 1286 accept 0 ALIGNMENT 919 YS2-9k16.q1k chr11 29 1139 384100 385197 F 1111 95.68 1220 accept 0 ALIGNMENT 27 YS2-9k16.p1k chr13 90 49 209870 209911 C 42 95.24 1222 reject_low 4 ALIGNMENT 34 YS2-9k16.p1k chr15 90 44 227287 227333 C 47 97.87 1222 reject_low 2 ALIGNMENT 0 YS2-9k16.p1k chr15 855 91 227288 227287 C 765 0.00 1222 reject_low 2 ALIGNMENT 30 YS2-9k16.p1k chr15 50 90 63056 63096 F 41 97.56 1222 reject_low 3 ALIGNMENT 876 YS2-9k16.p1k chr11 1216 53 385632 386821 C 1164 92.27 1222 accept 0 ALIGNMENT 20 YS2-9k16.p1k chr13 88 52 354193 354229 C 37 91.89 1222 reject_low 5 ALIGNMENT 0 YS2-9k16.p1k chr08 85 855 365405 365404 F 771 0.00 1222 reject_low 1 ALIGNMENT 0 YS2-9k16.p1k chr13 855 89 354194 354193 C 767 0.00 1222 reject_low 5 ALIGNMENT 26 YS2-9k16.p1k chr08 36 84 365356 365405 F 49 89.80 1222 reject_low 1 ALIGNMENT 0 YS2-9k16.p1k chr15 91 855 63096 63095 F 765 0.00 1222 reject_low 3 ALIGNMENT 0 YS2-9k16.p1k chr13 855 91 209871 209870 C 765 0.00 1222 reject_low 4 ALIGNMENT 943 YS2-9k17.p1k chr12 27 1138 461866 462982 F 1112 94.69 1197 accept 1 ALIGNMENT 943 YS2-9k17.p1k chr12 27 1138 452729 453845 F 1112 94.69 1197 accept 0 ALIGNMENT 925 YS2-9k18.p1k chr13 30 1156 486459 487601 F 1127 94.85 1185 accept 0 ALIGNMENT 159 YS2-9k18.p1k chr11 787 321 199534 200000 C 467 79.23 1185 reject_low 1 ALIGNMENT 0 YS2-9k18.p1k chr11 320 62 200001 200000 C 259 0.00 1185 reject_low 1 ALIGNMENT 1010 YS2-9k18.q1k chr13 1179 38 488828 489965 C 1142 96.85 1189 accept 0 ALIGNMENT 970 YS2-9k19.p1k chr08 29 1171 118086 119231 F 1143 95.45 1177 accept 0 ALIGNMENT 1063 YS2-9k19.q1k chr08 1237 34 119339 120549 C 1204 97.43 1292 accept 0 ALIGNMENT 888 YS2-9k20.q1k chr05 31 1106 370595 371676 F 1076 95.35 1134 accept 0 ALIGNMENT 931 YS2-9k20.p1k chr05 1156 31 374155 375288 C 1126 95.47 1177 accept 0 ALIGNMENT 969 YS2-9k22.p1k chr12 31 1127 245538 246637 F 1097 96.63 1149 accept 0 ALIGNMENT 980 YS2-9k22.q1k chr12 1137 31 249146 250249 C 1107 97.02 1138 accept 0 ALIGNMENT 251 YS2-9k23.q1k chr05 335 30 423948 424253 C 306 94.44 1205 reject_low 1 ALIGNMENT 0 YS2-9k23.q1k chr05 879 336 423949 423948 C 544 0.00 1205 reject_low 1 ALIGNMENT 1027 YS2-9k23.q1k chr07 30 1205 148289 149470 F 1176 96.68 1205 accept 0 ALIGNMENT 991 YS2-9k23.p1k chr07 1120 35 151843 152931 C 1086 97.70 1120 accept 0 ALIGNMENT 709 YS2-9k24.q1k chr10 29 880 305487 306338 F 852 95.31 1048 accept 0 ALIGNMENT 867 YS2-9k24.p1k chr10 1082 31 310489 311547 C 1052 94.77 1106 accept 0 ALIGNMENT 122 YS2-9l01.p1k chr12 43 176 489348 489481 F 134 97.01 1213 reject_low 2 ALIGNMENT 0 YS2-9l01.p1k chr12 162 723 482162 482161 F 562 0.00 1213 reject_low 5 ALIGNMENT 0 YS2-9l01.p1k chr12 162 723 472582 472581 F 562 0.00 1213 reject_low 4 ALIGNMENT 113 YS2-9l01.p1k chr12 43 161 472464 472582 F 119 98.32 1213 reject_low 4 ALIGNMENT 122 YS2-9l01.p1k chr12 26 161 468793 468930 F 136 97.06 1213 reject_low 3 ALIGNMENT 0 YS2-9l01.p1k chr12 162 723 485814 485813 F 562 0.00 1213 reject_low 6 ALIGNMENT 113 YS2-9l01.p1k chr12 43 161 485696 485814 F 119 98.32 1213 reject_low 6 ALIGNMENT 0 YS2-9l01.p1k chr12 177 723 489481 489480 F 547 0.00 1213 reject_low 2 ALIGNMENT 113 YS2-9l01.p1k chr12 43 161 482044 482162 F 119 98.32 1213 reject_low 5 ALIGNMENT 0 YS2-9l01.p1k chr12 162 723 468930 468929 F 562 0.00 1213 reject_low 3 ALIGNMENT 639 YS2-9l01.p1k chr12 26 1043 459656 460691 F 1018 90.57 1213 accept 0 ALIGNMENT 569 YS2-9l01.q1k chr12 702 30 451420 452104 C 673 96.14 1239 reject_low 1 ALIGNMENT 0 YS2-9l01.q1k chr12 599 348 489755 489754 C 252 0.00 1239 reject_low 2 ALIGNMENT 657 YS2-9l01.q1k chr12 867 30 460393 461241 C 838 94.27 1239 accept 0 ALIGNMENT 294 YS2-9l01.q1k chr12 347 30 489754 490072 C 318 97.80 1239 reject_low 2 ALIGNMENT 1000 YS2-9l02.p1k chr04 1154 28 983117 984247 C 1127 97.52 1156 ambiguous_trans 5 ALIGNMENT 1015 YS2-9l02.p1k chr12 1154 28 943141 944271 C 1127 97.96 1156 ambiguous_trans 1 ALIGNMENT 0 YS2-9l02.q1k chr12 854 352 220354 220353 C 503 0.00 1205 reject_low 17 ALIGNMENT 0 YS2-9l02.q1k chr13 588 854 185065 185064 F 267 0.00 1205 reject_low 13 ALIGNMENT 314 YS2-9l02.p1k chr16 927 89 846608 847449 C 839 80.10 1156 reject_low 14 ALIGNMENT 149 YS2-9l02.q1k chr05 351 36 497763 498078 C 316 82.91 1205 reject_low 26 ALIGNMENT 319 YS2-9l02.p1k chr13 927 89 186364 187202 C 839 80.21 1156 reject_low 13 ALIGNMENT 0 YS2-9l02.q1k chr16 352 531 845062 845253 F 180 0.00 1205 reject_low 14 ALIGNMENT 21 YS2-9l02.q1k chr10 532 587 473223 473278 F 56 80.36 1205 reject_low 15 ALIGNMENT 909 YS2-9l02.q1k chr07 36 1102 811784 812836 F 1067 96.91 1205 ambiguous_trans 4 ALIGNMENT 0 YS2-9l02.p1k chr05 62 88 446279 446278 F 27 0.00 1156 reject_low 18 ALIGNMENT 316 YS2-9l02.p1k chr12 89 927 217968 218806 F 839 80.10 1156 reject_low 17 ALIGNMENT 909 YS2-9l02.q1k chr04 36 1102 981497 982549 F 1067 96.91 1205 ambiguous_trans 5 ALIGNMENT 143 YS2-9l02.q1k chr10 36 351 472715 473030 F 316 82.28 1205 reject_low 15 ALIGNMENT 319 YS2-9l02.p1k chr10 927 89 480161 480999 C 839 80.21 1156 reject_low 22 ALIGNMENT 143 YS2-9l02.q1k chr13 36 351 196669 196984 F 316 82.28 1205 reject_low 19 ALIGNMENT 0 YS2-9l02.q1k chr16 588 854 845309 845308 F 267 0.00 1205 reject_low 14 ALIGNMENT 0 YS2-9l02.p1k chr10 88 62 481000 480999 C 27 0.00 1156 reject_low 22 ALIGNMENT 0 YS2-9l02.p1k chr16 62 88 853512 853511 F 27 0.00 1156 reject_low 24 ALIGNMENT 21 YS2-9l02.q1k chr13 532 587 185010 185065 F 56 80.36 1205 reject_low 13 ALIGNMENT 119 YS2-9l02.q1k chr16 351 36 809909 810224 C 316 80.06 1205 reject_low 21 ALIGNMENT 0 YS2-9l02.p1k chr05 62 88 495378 495377 F 27 0.00 1156 reject_low 26 ALIGNMENT 891 YS2-9l02.q1k chr15 36 1102 970614 971666 F 1067 96.34 1205 ambiguous_trans 12 ALIGNMENT 912 YS2-9l02.q1k chr04 1102 36 518259 519311 C 1067 97.00 1205 ambiguous_trans 0 ALIGNMENT 0 YS2-9l02.p1k chr10 88 62 475416 475415 C 27 0.00 1156 reject_low 15 ALIGNMENT 891 YS2-9l02.q1k chr02 36 1102 29973 31025 F 1067 96.34 1205 ambiguous_trans 10 ALIGNMENT 973 YS2-9l02.p1k chr04 1154 28 873768 874898 C 1127 96.72 1156 ambiguous_trans 9 ALIGNMENT 319 YS2-9l02.p1k chr05 89 927 446279 447117 F 839 80.21 1156 reject_low 18 ALIGNMENT 0 YS2-9l02.p1k chr12 62 88 478861 478860 F 27 0.00 1156 reject_low 20 ALIGNMENT 149 YS2-9l02.q1k chr15 36 351 595153 595468 F 316 82.91 1205 reject_low 16 ALIGNMENT 319 YS2-9l02.p1k chr13 927 89 198531 199369 C 839 80.21 1156 reject_low 19 ALIGNMENT 21 YS2-9l02.q1k chr16 587 532 855649 855704 C 56 80.36 1205 reject_low 24 ALIGNMENT 1003 YS2-9l02.p1k chr02 1154 28 31593 32723 C 1127 97.60 1156 ambiguous_trans 10 ALIGNMENT 0 YS2-9l02.q1k chr05 854 352 448665 448664 C 503 0.00 1205 reject_low 18 ALIGNMENT 0 YS2-9l02.q1k chr12 854 352 481247 481246 C 503 0.00 1205 reject_low 20 ALIGNMENT 909 YS2-9l02.q1k chr15 1102 36 708639 709691 C 1067 96.91 1205 ambiguous_trans 8 ALIGNMENT 316 YS2-9l02.p1k chr12 89 927 478861 479699 F 839 80.10 1156 reject_low 20 ALIGNMENT 909 YS2-9l02.q1k chr06 36 1102 138240 139292 F 1067 96.91 1205 ambiguous_trans 3 ALIGNMENT 149 YS2-9l02.q1k chr16 36 351 844746 845061 F 316 82.91 1205 reject_low 14 ALIGNMENT 0 YS2-9l02.p1k chr02 88 62 224075 224074 C 27 0.00 1156 reject_low 23 ALIGNMENT 143 YS2-9l02.q1k chr05 351 36 448664 448979 C 316 82.28 1205 reject_low 18 ALIGNMENT 21 YS2-9l02.q1k chr16 532 587 845254 845309 F 56 80.36 1205 reject_low 14 ALIGNMENT 0 YS2-9l02.q1k chr16 854 588 855650 855649 C 267 0.00 1205 reject_low 24 ALIGNMENT 1006 YS2-9l02.p1k chr06 1154 28 139860 140990 C 1127 97.69 1156 ambiguous_trans 3 ALIGNMENT 970 YS2-9l02.p1k chr15 1154 28 972234 973364 C 1127 96.63 1156 ambiguous_trans 12 ALIGNMENT 149 YS2-9l02.q1k chr13 36 351 184502 184817 F 316 82.91 1205 reject_low 13 ALIGNMENT 906 YS2-9l02.q1k chr14 1102 36 566608 567660 C 1067 96.81 1205 ambiguous_trans 7 ALIGNMENT 0 YS2-9l02.q1k chr02 352 854 260223 260222 F 503 0.00 1205 reject_low 25 ALIGNMENT 912 YS2-9l02.q1k chr12 36 1102 941521 942573 F 1067 97.00 1205 ambiguous_trans 1 ALIGNMENT 0 YS2-9l02.p1k chr16 88 62 847450 847449 C 27 0.00 1156 reject_low 14 ALIGNMENT 0 YS2-9l02.p1k chr13 88 62 187203 187202 C 27 0.00 1156 reject_low 13 ALIGNMENT 0 YS2-9l02.q1k chr16 854 352 809910 809909 C 503 0.00 1205 reject_low 21 ALIGNMENT 0 YS2-9l02.p1k chr13 88 62 199370 199369 C 27 0.00 1156 reject_low 19 ALIGNMENT 0 YS2-9l02.q1k chr05 854 588 497516 497515 C 267 0.00 1205 reject_low 26 ALIGNMENT 912 YS2-9l02.q1k chr03 36 1102 85142 86194 F 1067 97.00 1205 ambiguous_trans 2 ALIGNMENT 974 YS2-9l02.p1k chr15 28 1154 706941 708071 F 1127 96.72 1156 ambiguous_trans 8 ALIGNMENT 0 YS2-9l02.q1k chr10 352 531 473031 473222 F 180 0.00 1205 reject_low 15 ALIGNMENT 21 YS2-9l02.q1k chr05 587 532 497515 497570 C 56 80.36 1205 reject_low 26 ALIGNMENT 195 YS2-9l02.p1k chr05 89 627 495378 495916 F 539 79.59 1156 reject_low 26 ALIGNMENT 1016 YS2-9l02.p1k chr04 28 1154 516561 517691 F 1127 97.96 1156 ambiguous_trans 0 ALIGNMENT 903 YS2-9l02.q1k chr12 1102 36 980312 981364 C 1067 96.72 1205 ambiguous_trans 11 ALIGNMENT 319 YS2-9l02.p1k chr02 927 89 223236 224074 C 839 80.21 1156 reject_low 23 ALIGNMENT 974 YS2-9l02.p1k chr12 31 1154 978617 979744 F 1124 96.80 1156 ambiguous_trans 11 ALIGNMENT 319 YS2-9l02.p1k chr15 927 89 597015 597853 C 839 80.21 1156 reject_low 16 ALIGNMENT 310 YS2-9l02.p1k chr16 89 927 853512 854350 F 839 79.86 1156 reject_low 24 ALIGNMENT 0 YS2-9l02.p1k chr15 88 62 597854 597853 C 27 0.00 1156 reject_low 16 ALIGNMENT 982 YS2-9l02.p1k chr07 28 1154 571621 572752 F 1127 96.98 1156 ambiguous_trans 6 ALIGNMENT 1006 YS2-9l02.p1k chr07 1154 28 813404 814534 C 1127 97.69 1156 ambiguous_trans 4 ALIGNMENT 0 YS2-9l02.q1k chr13 352 854 196984 196983 F 503 0.00 1205 reject_low 19 ALIGNMENT 1006 YS2-9l02.p1k chr03 1154 28 86762 87892 C 1127 97.69 1156 ambiguous_trans 2 ALIGNMENT 909 YS2-9l02.q1k chr07 1102 36 573320 574372 C 1067 96.91 1205 ambiguous_trans 6 ALIGNMENT 0 YS2-9l02.q1k chr10 588 854 473278 473277 F 267 0.00 1205 reject_low 15 ALIGNMENT 0 YS2-9l02.q1k chr16 531 352 855705 855896 C 180 0.00 1205 reject_low 24 ALIGNMENT 319 YS2-9l02.p1k chr16 89 927 807524 808362 F 839 80.21 1156 reject_low 21 ALIGNMENT 149 YS2-9l02.q1k chr12 351 36 220353 220668 C 316 82.91 1205 reject_low 17 ALIGNMENT 114 YS2-9l02.q1k chr10 36 281 478299 478544 F 246 82.93 1205 reject_low 22 ALIGNMENT 140 YS2-9l02.q1k chr16 351 36 855897 856212 C 316 81.96 1205 reject_low 24 ALIGNMENT 0 YS2-9l02.q1k chr15 352 854 595468 595467 F 503 0.00 1205 reject_low 16 ALIGNMENT 0 YS2-9l02.p1k chr12 62 88 217968 217967 F 27 0.00 1156 reject_low 17 ALIGNMENT 143 YS2-9l02.q1k chr12 351 36 481246 481561 C 316 82.28 1205 reject_low 20 ALIGNMENT 0 YS2-9l02.p1k chr05 628 851 495916 495915 F 224 0.00 1156 reject_low 26 ALIGNMENT 0 YS2-9l02.q1k chr10 282 854 478544 478543 F 573 0.00 1205 reject_low 22 ALIGNMENT 322 YS2-9l02.p1k chr10 927 89 474577 475415 C 839 80.33 1156 reject_low 15 ALIGNMENT 0 YS2-9l02.q1k chr05 531 352 497571 497762 C 180 0.00 1205 reject_low 26 ALIGNMENT 0 YS2-9l02.p1k chr16 62 88 807524 807523 F 27 0.00 1156 reject_low 21 ALIGNMENT 983 YS2-9l02.p1k chr14 28 1154 564910 566040 F 1127 96.98 1156 ambiguous_trans 7 ALIGNMENT 0 YS2-9l02.q1k chr13 352 531 184818 185009 F 180 0.00 1205 reject_low 13 ALIGNMENT 909 YS2-9l02.q1k chr04 36 1102 872148 873200 F 1067 96.91 1205 ambiguous_trans 9 ALIGNMENT 149 YS2-9l02.q1k chr02 36 351 259908 260223 F 316 82.91 1205 reject_low 25 ALIGNMENT 0 YS2-9l05.q1k chr02 808 970 175712 175876 F 163 0.00 1204 reject_low 1 ALIGNMENT 988 YS2-9l05.p1k chr12 31 1209 689814 690998 F 1179 95.50 1210 accept 0 ALIGNMENT 987 YS2-9l05.q1k chr12 1200 30 692600 693772 C 1171 95.90 1204 accept 0 ALIGNMENT 38 YS2-9l05.q1k chr02 971 1022 175877 175927 F 52 92.31 1204 reject_low 1 ALIGNMENT 0 YS2-9l05.q1k chr02 62 733 175638 175637 F 672 0.00 1204 reject_low 1 ALIGNMENT 23 YS2-9l05.q1k chr02 734 807 175638 175711 F 74 78.38 1204 reject_low 1 ALIGNMENT 0 YS2-9l06.q1k chr12 366 326 647041 647040 C 41 0.00 366 accept 0 ALIGNMENT 286 YS2-9l06.q1k chr12 325 29 647040 647337 C 297 98.99 366 accept 0 ALIGNMENT 38 YS2-9l06.q1k vc_7 329 366 13525 13562 F 38 100.00 366 reject_low 12 ALIGNMENT 0 YS2-9l06.q1k vc_3 325 62 2513 2512 C 264 0.00 366 reject_low 9 ALIGNMENT 0 YS2-9l06.q1k vc_4 62 325 5831 5830 F 264 0.00 366 reject_low 10 ALIGNMENT 41 YS2-9l06.q1k vc_3 366 326 2472 2512 C 41 100.00 366 reject_low 9 ALIGNMENT 310 YS2-9l06.p1k vc_5 464 1 4203 4669 C 464 89.66 513 reject_vc 4 ALIGNMENT 41 YS2-9l06.q1k vc_4 326 366 5831 5871 F 41 100.00 366 reject_low 10 ALIGNMENT 0 YS2-9l06.q1k vc_5 327 62 5064 5063 C 266 0.00 366 reject_low 11 ALIGNMENT 0 YS2-9l06.q1k vc_7 62 328 13525 13524 F 267 0.00 366 reject_low 12 ALIGNMENT 310 YS2-9l06.p1k vc_1 464 1 1283 1749 C 464 89.66 513 reject_vc 1 ALIGNMENT 36 YS2-9l06.q1k vc_5 363 328 1 36 C 36 100.00 366 reject_low 13 ALIGNMENT 310 YS2-9l06.p1k vc_2 464 1 1283 1749 C 464 89.66 513 reject_vc 2 ALIGNMENT 304 YS2-9l06.p1k vc_7 1 464 13918 14384 F 464 89.22 513 reject_vc 7 ALIGNMENT 310 YS2-9l06.p1k vc_3 464 1 1283 1749 C 464 89.66 513 reject_vc 3 ALIGNMENT 0 YS2-9l06.q1k vc_5 327 62 37 36 C 266 0.00 366 reject_low 13 ALIGNMENT 304 YS2-9l06.p1k vc_7 1 464 456 922 F 464 89.22 513 reject_vc 6 ALIGNMENT 310 YS2-9l06.p1k vc_6 1 464 3712 4178 F 464 89.66 513 reject_vc 5 ALIGNMENT 39 YS2-9l06.q1k vc_5 366 328 5025 5063 C 39 100.00 366 reject_low 11 ALIGNMENT 41 YS2-9l06.q1k vc_1 366 326 2472 2512 C 41 100.00 366 reject_low 8 ALIGNMENT 0 YS2-9l06.q1k vc_1 325 62 2513 2512 C 264 0.00 366 reject_low 8 ALIGNMENT 212 YS2-9l08.q1k chr01 559 80 31880 32359 C 480 81.67 1207 reject_low 1 ALIGNMENT 1024 YS2-9l08.q1k chr15 40 1205 1042210 1043385 F 1166 96.74 1207 accept 0 ALIGNMENT 968 YS2-9l08.p1k chr15 1204 23 1045452 1046633 C 1182 94.42 1215 accept 0 ALIGNMENT 0 YS2-9l08.q1k chr01 790 560 31881 31880 C 231 0.00 1207 reject_low 1 ALIGNMENT 0 YS2-9l08.q1k chr01 79 62 32360 32359 C 18 0.00 1207 reject_low 1 ALIGNMENT 975 YS2-9l10.p1k chr14 1190 34 54728 55908 C 1157 96.02 1190 accept 0 ALIGNMENT 992 YS2-9l10.q1k chr14 31 1160 50745 51872 F 1130 97.26 1183 accept 0 ALIGNMENT 151 YS2-9l11.p1k chr16 32 189 767621 767779 F 158 99.37 207 accept 0 ALIGNMENT 0 YS2-9l11.p1k chr16 190 207 767779 767778 F 18 0.00 207 accept 0 ALIGNMENT 930 YS2-9l12.p1k chr10 35 1162 603538 604672 F 1128 94.77 1203 accept 0 ALIGNMENT 849 YS2-9l12.q1k chr10 1130 29 607468 608546 C 1102 94.65 1263 accept 0 ALIGNMENT 820 YS2-9l13.q1k chr06 887 27 47723 48585 C 861 98.61 1212 accept_chi 0 ALIGNMENT 0 YS2-9l13.p1k vc_2 916 62 2106 2105 C 855 0.00 1186 reject_low 4 ALIGNMENT 0 YS2-9l13.q1k vc_4 925 62 1535 1534 C 864 0.00 1212 reject_low 12 ALIGNMENT 0 YS2-9l13.q1k vc_4 62 925 126 125 F 864 0.00 1212 reject_low 11 ALIGNMENT 26 YS2-9l13.q1k vc_7 889 924 13525 13561 F 36 91.67 1212 reject_low 18 ALIGNMENT 69 YS2-9l13.q1k vc_2 926 1061 2164 2294 F 136 86.03 1212 reject_low 10 ALIGNMENT 0 YS2-9l13.p1k vc_7 62 916 100 99 F 855 0.00 1186 reject_low 6 ALIGNMENT 126 YS2-9l13.p1k vc_5 1165 917 4759 5025 C 249 85.94 1186 reject_low 2 ALIGNMENT 0 YS2-9l13.q1k vc_1 62 925 2531 2530 F 864 0.00 1212 reject_low 9 ALIGNMENT 69 YS2-9l13.q1k vc_1 926 1061 2531 2661 F 136 86.03 1212 reject_low 9 ALIGNMENT 126 YS2-9l13.p1k vc_1 1165 917 1839 2105 C 249 85.94 1186 reject_low 3 ALIGNMENT 0 YS2-9l13.q1k vc_5 887 62 37 36 C 826 0.00 1212 reject_low 19 ALIGNMENT 0 YS2-9l13.q1k vc_1 885 62 2513 2512 C 824 0.00 1212 reject_low 15 ALIGNMENT 68 YS2-9l13.q1k vc_4 1099 926 5648 5812 C 174 83.33 1212 reject_low 8 ALIGNMENT 0 YS2-9l13.q1k vc_5 62 925 2398 2397 F 864 0.00 1212 reject_low 2 ALIGNMENT 0 YS2-9l13.q1k vc_4 925 62 5813 5812 C 864 0.00 1212 reject_low 8 ALIGNMENT 29 YS2-9l13.q1k vc_4 886 924 5831 5870 F 39 92.31 1212 reject_low 13 ALIGNMENT 0 YS2-9l13.p1k vc_1 916 62 2106 2105 C 855 0.00 1186 reject_low 3 ALIGNMENT 0 YS2-9l13.p1k vc_7 62 916 13562 13561 F 855 0.00 1186 reject_low 7 ALIGNMENT 126 YS2-9l13.p1k vc_7 917 1165 100 366 F 249 85.94 1186 reject_low 6 ALIGNMENT 0 YS2-9l13.q1k vc_5 887 62 5064 5063 C 826 0.00 1212 reject_low 17 ALIGNMENT 69 YS2-9l13.q1k vc_4 926 1061 6353 6483 F 136 86.03 1212 reject_low 13 ALIGNMENT 126 YS2-9l13.p1k vc_7 917 1165 13562 13828 F 249 85.94 1186 reject_low 7 ALIGNMENT 0 YS2-9l13.p1k vc_1 916 62 2473 2472 C 855 0.00 1186 reject_low 14 ALIGNMENT 0 YS2-9l13.p1k vc_4 62 916 5871 5870 F 855 0.00 1186 reject_low 5 ALIGNMENT 0 YS2-9l13.q1k vc_2 62 925 2164 2163 F 864 0.00 1212 reject_low 10 ALIGNMENT 25 YS2-9l13.q1k vc_5 922 888 1 36 C 35 91.43 1212 reject_low 19 ALIGNMENT 793 YS2-9l13.p1k chr06 37 899 47723 48585 F 863 97.57 1186 accept_chi 1 ALIGNMENT 29 YS2-9l13.q1k vc_2 924 886 2106 2145 C 39 92.31 1212 reject_low 16 ALIGNMENT 29 YS2-9l13.q1k vc_1 924 886 2473 2512 C 39 92.31 1212 reject_low 15 ALIGNMENT 0 YS2-9l13.p1k vc_5 916 62 5026 5025 C 855 0.00 1186 reject_low 2 ALIGNMENT 0 YS2-9l13.q1k vc_4 62 885 5831 5830 F 824 0.00 1212 reject_low 13 ALIGNMENT 126 YS2-9l13.p1k vc_4 917 1165 5871 6137 F 249 85.94 1186 reject_low 5 ALIGNMENT 0 YS2-9l13.q1k vc_7 62 888 13525 13524 F 827 0.00 1212 reject_low 18 ALIGNMENT 56 YS2-9l13.q1k vc_4 1009 926 1453 1534 C 84 90.48 1212 reject_low 12 ALIGNMENT 26 YS2-9l13.p1k vc_1 947 917 2441 2472 C 31 96.77 1186 reject_low 14 ALIGNMENT 0 YS2-9l13.q1k vc_2 885 62 2146 2145 C 824 0.00 1212 reject_low 16 ALIGNMENT 69 YS2-9l13.q1k vc_5 926 1061 2398 2528 F 136 86.03 1212 reject_low 2 ALIGNMENT 27 YS2-9l13.q1k vc_5 924 888 5026 5063 C 37 91.89 1212 reject_low 17 ALIGNMENT 126 YS2-9l13.p1k vc_2 1165 917 1839 2105 C 249 85.94 1186 reject_low 4 ALIGNMENT 69 YS2-9l13.q1k vc_4 926 1061 126 256 F 136 86.03 1212 reject_low 11 ALIGNMENT 0 YS2-9l13.q1k vc_4 925 925 5871 6352 F 1 0.00 1212 reject_low 13 ALIGNMENT 0 YS2-9l14.q1k vc_5 273 62 5064 5063 C 212 0.00 312 reject_low 12 ALIGNMENT 42 YS2-9l14.q1k vc_3 312 271 2472 2513 C 42 100.00 312 reject_low 10 ALIGNMENT 359 YS2-9l14.p1k vc_5 564 1 4116 4669 C 564 89.89 568 reject_vc 1 ALIGNMENT 0 YS2-9l14.q1k vc_7 62 274 13525 13524 F 213 0.00 312 reject_low 13 ALIGNMENT 356 YS2-9l14.p1k vc_2 564 1 1196 1749 C 564 89.72 568 reject_vc 3 ALIGNMENT 0 YS2-9l14.q1k vc_2 270 62 2147 2146 C 209 0.00 312 reject_low 9 ALIGNMENT 0 YS2-9l14.q1k vc_3 270 62 2514 2513 C 209 0.00 312 reject_low 10 ALIGNMENT 356 YS2-9l14.p1k vc_3 564 1 1196 1749 C 564 89.72 568 reject_vc 4 ALIGNMENT 349 YS2-9l14.p1k vc_6 1 491 3712 4196 F 491 91.85 568 reject_vc 7 ALIGNMENT 38 YS2-9l14.q1k vc_7 275 312 13525 13562 F 38 100.00 312 reject_low 13 ALIGNMENT 36 YS2-9l14.q1k vc_5 309 274 1 36 C 36 100.00 312 reject_low 14 ALIGNMENT 356 YS2-9l14.p1k vc_1 564 1 1196 1749 C 564 89.72 568 reject_vc 2 ALIGNMENT 232 YS2-9l14.q1k chr15 30 271 1014814 1015055 F 242 100.00 312 accept 0 ALIGNMENT 0 YS2-9l14.q1k chr15 272 312 1015055 1015054 F 41 0.00 312 accept 0 ALIGNMENT 42 YS2-9l14.q1k vc_4 271 312 5830 5871 F 42 100.00 312 reject_low 11 ALIGNMENT 0 YS2-9l14.q1k vc_4 62 270 5830 5829 F 209 0.00 312 reject_low 11 ALIGNMENT 0 YS2-9l14.q1k vc_5 273 62 37 36 C 212 0.00 312 reject_low 14 ALIGNMENT 42 YS2-9l14.q1k vc_2 312 271 2105 2146 C 42 100.00 312 reject_low 9 ALIGNMENT 349 YS2-9l14.p1k vc_7 1 564 456 1009 F 564 89.18 568 reject_vc 5 ALIGNMENT 0 YS2-9l14.q1k vc_1 270 62 2514 2513 C 209 0.00 312 reject_low 8 ALIGNMENT 42 YS2-9l14.q1k vc_1 312 271 2472 2513 C 42 100.00 312 reject_low 8 ALIGNMENT 39 YS2-9l14.q1k vc_5 312 274 5025 5063 C 39 100.00 312 reject_low 12 ALIGNMENT 349 YS2-9l14.p1k vc_7 1 564 13918 14471 F 564 89.18 568 reject_vc 6 ALIGNMENT 780 YS2-9l15.q1k chr12 30 984 4588 5535 F 955 95.50 1250 reject_low 9 ALIGNMENT 305 YS2-9l15.p1k chr13 1198 650 4977 5538 C 549 86.52 1204 reject_low 6 ALIGNMENT 0 YS2-9l15.q1k chr12 62 993 11090 11089 F 932 0.00 1250 reject_low 28 ALIGNMENT 0 YS2-9l15.p1k chr13 649 649 5539 5642 C 1 0.00 1204 reject_low 6 ALIGNMENT 305 YS2-9l15.p1k chr12 1198 650 5101 5662 C 549 86.52 1204 reject_low 9 ALIGNMENT 312 YS2-9l15.p1k chr12 650 1017 1065152 1065521 F 368 95.38 1204|1,0 reject_low 4 ALIGNMENT 0 YS2-9l15.q1k chr13 62 993 5431 5430 F 932 0.00 1250 reject_low 29 ALIGNMENT 0 YS2-9l15.p1k chr02 1055 1018 5457 5469 C 38 0.00 1204 reject_low 13 ALIGNMENT 717 YS2-9l15.q1k chr02 30 984 4789 5720 F 955 93.82 1250 reject_low 13 ALIGNMENT 114 YS2-9l15.p1k chr16 936 1198 942804 943069 F 263 83.27 1204 reject_low 33 ALIGNMENT 794 YS2-9l15.q1k chr05 1032 30 570392 571370 C 1003 95.21 1250 ambiguous_tel 0 ALIGNMENT 314 YS2-9l15.p1k chr12 31 651 1064363 1064979 F 621 87.60 1204|0,1 reject_low 4 ALIGNMENT 254 YS2-9l15.p1k chr08 650 1017 556985 557362 F 368 90.49 1204 reject_low 11 ALIGNMENT 22 YS2-9l15.q1k chr07 1032 994 1084419 1084457 C 39 89.74 1250 reject_low 5 ALIGNMENT 0 YS2-9l15.q1k chr12 62 993 5555 5554 F 932 0.00 1250 reject_low 27 ALIGNMENT 839 YS2-9l15.q1k chr14 30 984 5538 6491 F 955 97.07 1250 reject_low 7 ALIGNMENT 0 YS2-9l15.p1k chr12 649 649 11198 11408 C 1 0.00 1204 reject_low 10 ALIGNMENT 839 YS2-9l15.q1k chr07 984 30 1084477 1085430 C 955 97.07 1250 reject_low 5 ALIGNMENT 780 YS2-9l15.q1k chr13 30 984 4464 5411 F 955 95.50 1250 reject_low 6 ALIGNMENT 0 YS2-9l15.p1k chr16 393 784 942805 942804 F 392 0.00 1204 reject_low 15 ALIGNMENT 0 YS2-9l15.q1k chr12 993 985 1071758 1071776 C 9 0.00 1250 reject_low 4 ALIGNMENT 0 YS2-9l15.q1k chr14 62 993 6511 6510 F 932 0.00 1250 reject_low 30 ALIGNMENT 347 YS2-9l15.p1k chr08 31 648 556190 556807 F 618 89.00 1204 reject_low 11 ALIGNMENT 0 YS2-9l15.q1k chr08 666 802 4952 4971 F 137 0.00 1250 reject_low 19 ALIGNMENT 252 YS2-9l15.p1k chr10 499 31 7225 7682 C 469 88.70 1204 reject_low 3 ALIGNMENT 575 YS2-9l15.p1k chr07 31 1198 1083725 1084911 F 1168 85.62 1204 reject_low 5 ALIGNMENT 0 YS2-9l15.p1k chr12 62 649 1071650 1071649 F 588 0.00 1204 reject_low 18 ALIGNMENT 0 YS2-9l15.q1k chr16 62 993 6420 6419 F 932 0.00 1250 reject_low 31 ALIGNMENT 370 YS2-9l15.p1k chr02 31 648 812458 813074 F 618 89.81 1204 reject_low 22 ALIGNMENT 0 YS2-9l15.q1k chr04 993 985 1525557 1525575 C 9 0.00 1250 reject_low 12 ALIGNMENT 565 YS2-9l15.p1k chr15 31 1198 1084003 1085175 F 1168 85.53 1204 reject_low 8 ALIGNMENT 47 YS2-9l15.p1k chr08 1056 1198 557376 557519 F 143 81.12 1204 reject_low 32 ALIGNMENT 0 YS2-9l15.q1k chr02 62 993 5740 5739 F 932 0.00 1250 reject_low 25 ALIGNMENT 22 YS2-9l15.q1k chr02 994 1032 5740 5778 F 39 89.74 1250 reject_low 25 ALIGNMENT 0 YS2-9l15.p1k chr16 66 93 942512 942510 F 28 0.00 1204 reject_low 15 ALIGNMENT 308 YS2-9l15.p1k chr04 650 1198 1525449 1526010 F 549 86.70 1204 reject_low 12 ALIGNMENT 0 YS2-9l15.p1k chr12 1018 1055 1065522 1065534 F 38 0.00 1204 reject_low 4 ALIGNMENT 305 YS2-9l15.p1k chr12 1198 650 10636 11197 C 549 86.52 1204 reject_low 10 ALIGNMENT 265 YS2-9l15.p1k chr06 564 31 4922 5445 C 534 87.27 1204 reject_low 17 ALIGNMENT 292 YS2-9l15.p1k chr04 31 649 1524693 1525295 F 619 87.08 1204 reject_low 12 ALIGNMENT 377 YS2-9l15.p1k chr13 31 651 923623 924238 F 621 91.14 1204 reject_low 20 ALIGNMENT 22 YS2-9l15.q1k chr12 994 1032 5555 5593 F 39 89.74 1250 reject_low 27 ALIGNMENT 47 YS2-9l15.p1k chr12 1056 1198 1065535 1065678 F 143 81.12 1204 reject_low 4 ALIGNMENT 329 YS2-9l15.p1k chr09 1198 700 6446 6948 C 499 89.98 1204 reject_low 2 ALIGNMENT 0 YS2-9l15.p1k chr08 649 649 556808 556984 F 1 0.00 1204 reject_low 11 ALIGNMENT 22 YS2-9l15.q1k chr14 994 1032 6511 6549 F 39 89.74 1250 reject_low 30 ALIGNMENT 275 YS2-9l15.p1k chr14 651 31 6741 7343 C 621 86.15 1204|1,0 reject_low 7 ALIGNMENT 0 YS2-9l15.p1k chr12 651 650 1064979 1065152 F 0 0.00 1204 reject_low 4 ALIGNMENT 29 YS2-9l15.p1k chr06 1198 1108 4145 4236 C 91 81.32 1204 reject_low 17 ALIGNMENT 0 YS2-9l15.p1k chr08 62 1055 557376 557375 F 994 0.00 1204 reject_low 32 ALIGNMENT 22 YS2-9l15.q1k chr15 1032 994 1084683 1084721 C 39 89.74 1250 reject_low 8 ALIGNMENT 22 YS2-9l15.q1k chr04 1032 994 1525518 1525556 C 39 89.74 1250 reject_low 12 ALIGNMENT 785 YS2-9l15.q1k chr04 984 30 1525576 1526524 C 955 95.60 1250 reject_low 12 ALIGNMENT 370 YS2-9l15.p1k chr13 648 31 5643 6259 C 618 89.97 1204 reject_low 6 ALIGNMENT 0 YS2-9l15.p1k chr16 62 139 942294 942293 F 78 0.00 1204 reject_low 33 ALIGNMENT 329 YS2-9l15.p1k chr10 1198 700 6429 6931 C 499 89.98 1204 reject_low 3 ALIGNMENT 22 YS2-9l15.q1k chr08 1032 994 557054 557092 C 39 89.74 1250 reject_low 11 ALIGNMENT 0 YS2-9l15.p1k chr06 1107 1078 4237 4246 C 30 0.00 1204 reject_low 17 ALIGNMENT 0 YS2-9l15.p1k chr04 650 649 1525296 1525448 F 0 0.00 1204 reject_low 12 ALIGNMENT 839 YS2-9l15.q1k chr16 30 984 5447 6400 F 955 97.07 1250 ambiguous_tel 1 ALIGNMENT 0 YS2-9l15.p1k chr06 611 565 4913 4921 C 47 0.00 1204 reject_low 17 ALIGNMENT 712 YS2-9l15.q1k chr08 984 30 557112 558042 C 955 93.72 1250 reject_low 11 ALIGNMENT 0 YS2-9l15.p1k chr02 651 652 5846 5901 C 0 0.00 1204 reject_low 13 ALIGNMENT 0 YS2-9l15.q1k chr08 993 985 557093 557111 C 9 0.00 1250 reject_low 11 ALIGNMENT 22 YS2-9l15.q1k chr08 803 827 4972 4996 F 25 96.00 1250 reject_low 19 ALIGNMENT 272 YS2-9l15.p1k chr06 1077 650 4247 4685 C 428 89.25 1204|0,1 reject_low 17 ALIGNMENT 0 YS2-9l15.p1k chr04 784 649 207 206 C 136 0.00 1204 reject_low 21 ALIGNMENT 253 YS2-9l15.p1k chr02 1017 651 5470 5846 C 367 90.46 1204|0,1 reject_low 13 ALIGNMENT 22 YS2-9l15.q1k chr06 994 1032 4578 4616 F 39 89.74 1250 reject_low 26 ALIGNMENT 332 YS2-9l15.p1k chr10 31 648 744902 745507 F 618 88.67 1204 reject_low 24 ALIGNMENT 308 YS2-9l15.p1k chr14 1198 650 6057 6618 C 549 86.70 1204|0,1 reject_low 7 ALIGNMENT 22 YS2-9l15.p1k chr16 31 65 942477 942511 F 35 94.29 1204 reject_low 15 ALIGNMENT 47 YS2-9l15.p1k chr02 1198 1056 5313 5456 C 143 81.12 1204 reject_low 13 ALIGNMENT 615 YS2-9l15.q1k chr05 32 923 5495 6335 F 892 92.60 1250 reject_low 16 ALIGNMENT 0 YS2-9l15.p1k chr02 649 784 813074 813073 F 136 0.00 1204 reject_low 22 ALIGNMENT 252 YS2-9l15.p1k chr09 499 31 7242 7699 C 469 88.70 1204 reject_low 2 ALIGNMENT 0 YS2-9l15.p1k chr06 650 651 4685 4873 C 0 0.00 1204 reject_low 17 ALIGNMENT 670 YS2-9l15.q1k chr12 1032 32 1065221 1066171 C 1001 92.01 1250 reject_low 14 ALIGNMENT 291 YS2-9l15.p1k chr12 648 31 11409 12000 C 618 87.54 1204 reject_low 9,10 ALIGNMENT 753 YS2-9l15.q1k chr06 30 984 3626 4558 F 955 94.87 1250 reject_low 17 ALIGNMENT 0 YS2-9l15.p1k chr12 649 649 5663 11408 C 1 0.00 1204 reject_low 9 ALIGNMENT 568 YS2-9l15.p1k chr16 1198 31 5966 7138 C 1168 85.53 1204 ambiguous_tel 1 ALIGNMENT 785 YS2-9l15.q1k chr15 984 30 1084741 1085689 C 955 95.60 1250 reject_low 8 ALIGNMENT 31 YS2-9l15.p1k chr06 651 612 4873 4912 C 40 97.50 1204|1,0 reject_low 17 ALIGNMENT 780 YS2-9l15.q1k chr12 30 984 10123 11070 F 955 95.50 1250 reject_low 10 ALIGNMENT 22 YS2-9l15.q1k chr12 994 1032 11090 11128 F 39 89.74 1250 reject_low 28 ALIGNMENT 0 YS2-9l15.p1k chr09 699 500 6949 7241 C 200 0.00 1204 reject_low 2 ALIGNMENT 0 YS2-9l15.q1k chr15 993 985 1084722 1084740 C 9 0.00 1250 reject_low 8 ALIGNMENT 0 YS2-9l15.p1k chr16 188 935 942342 942803 F 748 0.00 1204 reject_low 33 ALIGNMENT 0 YS2-9l15.p1k chr10 699 500 6932 7224 C 200 0.00 1204 reject_low 3 ALIGNMENT 22 YS2-9l15.q1k chr16 994 1032 6420 6458 F 39 89.74 1250 reject_low 31 ALIGNMENT 22 YS2-9l15.q1k chr13 994 1032 5431 5469 F 39 89.74 1250 reject_low 29 ALIGNMENT 197 YS2-9l15.p1k chr16 94 392 942511 942805 F 299 91.30 1204 reject_low 15 ALIGNMENT 0 YS2-9l15.q1k chr06 62 993 4578 4577 F 932 0.00 1250 reject_low 26 ALIGNMENT 335 YS2-9l15.p1k chr09 31 651 439150 439766 F 621 88.73 1204 reject_low 23 ALIGNMENT 741 YS2-9l15.q1k chr16 813 30 942804 943588 C 784 98.98 1250 reject_low 15 ALIGNMENT 374 YS2-9l15.p1k chr04 648 31 206 819 C 618 90.29 1204 reject_low 21 ALIGNMENT 22 YS2-9l15.q1k chr12 1032 994 1071719 1071757 C 39 89.74 1250 reject_low 4,18 ALIGNMENT 536 YS2-9l15.q1k chr08 30 665 4320 4951 F 636 96.23 1250 reject_low 19 ALIGNMENT 897 YS2-9l15.q1k chr09 32 1032 5929 6929 F 1001 97.60 1250 reject_low 2 ALIGNMENT 635 YS2-9l15.p1k chr05 31 1198 569679 570875 F 1168 87.41 1204 ambiguous_tel 0 ALIGNMENT 785 YS2-9l15.q1k chr12 984 30 1071777 1072725 C 955 95.60 1250 reject_low 4 ALIGNMENT 0 YS2-9l15.q1k chr12 993 62 1071758 1071757 C 932 0.00 1250 reject_low 18 ALIGNMENT 897 YS2-9l15.q1k chr10 32 1032 5912 6912 F 1001 97.60 1250 reject_low 3 ALIGNMENT 0 YS2-9l15.p1k chr13 652 784 924238 924237 F 133 0.00 1204 reject_low 20 ALIGNMENT 22 YS2-9l15.p1k chr16 140 187 942294 942341 F 48 83.33 1204 reject_low 33 ALIGNMENT 0 YS2-9l15.p1k chr14 650 651 6618 6741 C 0 0.00 1204 reject_low 7 ALIGNMENT 308 YS2-9l15.p1k chr12 650 1198 1071650 1072211 F 549 86.70 1204 reject_low 18 ALIGNMENT 0 YS2-9l15.p1k chr10 649 784 745507 745506 F 136 0.00 1204 reject_low 24 ALIGNMENT 0 YS2-9l15.p1k chr09 652 784 439766 439765 F 133 0.00 1204 reject_low 23 ALIGNMENT 348 YS2-9l15.p1k chr02 651 31 5902 6523 C 621 89.05 1204 reject_low 13 ALIGNMENT 0 YS2-9l15.q1k chr07 993 985 1084458 1084476 C 9 0.00 1250 reject_low 5 ALIGNMENT 944 YS2-9l16.q1k chr10 1183 28 199748 200893 C 1156 96.11 1221 ambiguous_trans 1 ALIGNMENT 935 YS2-9l16.q1k chr08 1183 28 87816 88961 C 1156 95.85 1221 ambiguous_trans 2 ALIGNMENT 926 YS2-9l16.p1k chr08 1176 35 466970 468116 C 1142 94.57 1226 accept 0 ALIGNMENT 935 YS2-9l16.q1k chr16 28 1183 439684 440829 F 1156 95.85 1221 ambiguous_trans 3 ALIGNMENT 921 YS2-9l17.q1k chr16 1155 38 260481 261582 C 1118 96.24 1226 accept 0 ALIGNMENT 955 YS2-9l17.p1k chr16 30 1168 260175 261326 F 1139 95.43 1180 accept 0 ALIGNMENT 0 YS2-9l18.q1k chr02 193 232 465615 465614 F 40 0.00 232 accept_chi 1 ALIGNMENT 0 YS2-9l18.q1k vc_4 62 191 5831 5830 F 130 0.00 232 reject_low 5 ALIGNMENT 0 YS2-9l18.q1k vc_7 62 194 13525 13524 F 133 0.00 232 reject_low 7 ALIGNMENT 0 YS2-9l18.q1k vc_5 193 62 5064 5063 C 132 0.00 232 reject_low 6 ALIGNMENT 0 YS2-9l18.q1k vc_1 191 62 2513 2512 C 130 0.00 232 reject_low 2 ALIGNMENT 39 YS2-9l18.q1k vc_5 232 194 5025 5063 C 39 100.00 232 reject_low 6 ALIGNMENT 0 YS2-9l18.p1k chr02 209 191 465455 465454 C 19 0.00 209 accept_chi 0 ALIGNMENT 150 YS2-9l18.q1k chr02 32 192 465454 465615 F 161 98.14 232 accept_chi 1 ALIGNMENT 36 YS2-9l18.q1k vc_5 229 194 1 36 C 36 100.00 232 reject_low 8 ALIGNMENT 0 YS2-9l18.q1k vc_3 191 62 2513 2512 C 130 0.00 232 reject_low 4 ALIGNMENT 38 YS2-9l18.q1k vc_7 195 232 13525 13562 F 38 100.00 232 reject_low 7 ALIGNMENT 156 YS2-9l18.p1k chr02 190 29 465454 465615 C 162 98.77 209 accept_chi 0 ALIGNMENT 0 YS2-9l18.q1k vc_2 191 62 2146 2145 C 130 0.00 232 reject_low 3 ALIGNMENT 41 YS2-9l18.q1k vc_4 192 232 5831 5871 F 41 100.00 232 reject_low 5 ALIGNMENT 0 YS2-9l18.q1k vc_5 193 62 37 36 C 132 0.00 232 reject_low 8 ALIGNMENT 41 YS2-9l18.q1k vc_2 232 192 2105 2145 C 41 100.00 232 reject_low 3 ALIGNMENT 41 YS2-9l18.q1k vc_3 232 192 2472 2512 C 41 100.00 232 reject_low 4 ALIGNMENT 41 YS2-9l18.q1k vc_1 232 192 2472 2512 C 41 100.00 232 reject_low 2 ALIGNMENT 189 YS2-9l19.q1k chr09 75 376 336848 337149 F 302 89.07 1387 accept_chi 1 ALIGNMENT 0 YS2-9l19.p1k chr09 362 344 336833 336832 C 19 0.00 362 accept_chi 0 ALIGNMENT 255 YS2-9l19.p1k chr09 343 28 336832 337149 C 316 94.94 362 accept_chi 0 ALIGNMENT 936 YS2-9l20.p1k chr04 1161 28 378522 379666 C 1134 94.62 1174 accept 0 ALIGNMENT 891 YS2-9l20.q1k chr04 46 1157 374729 375864 F 1112 94.96 1157 accept 0 ALIGNMENT 955 YS2-9l21.q1k chr13 1152 39 562893 564007 C 1114 96.05 1152 accept 0 ALIGNMENT 905 YS2-9l21.p1k chr13 31 1129 561914 563010 F 1099 94.72 1155 accept 0 ALIGNMENT 0 YS2-9l22.p1k chr09 638 844 177501 177500 F 207 0.00 1141 reject_low 2 ALIGNMENT 982 YS2-9l22.p1k chr12 31 1138 828829 829928 F 1108 96.66 1141 accept 0 ALIGNMENT 919 YS2-9l22.q1k chr12 1113 38 830703 831776 C 1076 96.28 1129 accept 0 ALIGNMENT 0 YS2-9l22.p1k chr06 62 609 57867 57866 F 548 0.00 1141 reject_low 1 ALIGNMENT 0 YS2-9l22.p1k chr06 650 844 57906 57905 F 195 0.00 1141 reject_low 1 ALIGNMENT 24 YS2-9l22.p1k chr04 599 634 1385461 1385496 F 36 97.22 1141 reject_low 3 ALIGNMENT 25 YS2-9l22.p1k chr09 599 637 177463 177501 F 39 97.44 1141 reject_low 2 ALIGNMENT 0 YS2-9l22.p1k chr04 635 844 1385496 1385495 F 210 0.00 1141 reject_low 3 ALIGNMENT 0 YS2-9l22.p1k chr04 62 598 1385461 1385460 F 537 0.00 1141 reject_low 3 ALIGNMENT 22 YS2-9l22.p1k chr06 610 649 57867 57906 F 40 95.00 1141 reject_low 1 ALIGNMENT 0 YS2-9l22.p1k chr09 62 598 177463 177462 F 537 0.00 1141 reject_low 2 ALIGNMENT 952 YS2-9l23.p1k chr14 27 1111 223588 224670 F 1085 97.24 1113 accept 0 ALIGNMENT 949 YS2-9l23.q1k chr14 1107 38 227904 228979 C 1070 97.20 1117 accept 0 ALIGNMENT 436 YS2-9l24.p1k chr14 25 500 75538 76014 F 476 97.69 1189 accept 0 ALIGNMENT 942 YS2-9l24.q1k chr14 1099 38 78941 80003 C 1062 96.70 1099 accept 0 ALIGNMENT 1001 YS2-9m01.q1k chr07 1270 36 970081 971306 C 1235 95.22 1280 accept_chi 0 ALIGNMENT 701 YS2-9m01.p1k chr05 92 1011 394177 395084 F 920 93.59 1186 accept_chi 1 ALIGNMENT 919 YS2-9m03.p1k chr12 30 1150 685623 686757 F 1121 95.54 1158 accept 0 ALIGNMENT 944 YS2-9m03.q1k chr12 1139 37 689635 690753 C 1103 96.92 1237 accept 0 ALIGNMENT 23 YS2-9m04.p1k chr14 286 308 688140 688162 F 23 100.00 1182 reject_low 1 ALIGNMENT 0 YS2-9m04.p1k chr14 309 845 688162 688161 F 537 0.00 1182 reject_low 1 ALIGNMENT 0 YS2-9m04.p1k chr14 62 285 688140 688139 F 224 0.00 1182 reject_low 1 ALIGNMENT 851 YS2-9m04.q1k chr14 36 1030 686764 687741 F 995 96.98 1241 accept 0 ALIGNMENT 996 YS2-9m04.p1k chr14 1151 30 687294 688418 C 1122 96.79 1182 accept 0 ALIGNMENT 0 YS2-9m06.p1k chr08 699 681 140996 140995 C 19 0.00 699 accept_chi 0 ALIGNMENT 638 YS2-9m06.q1k chr08 37 686 140995 141644 F 650 100.00 687 accept_chi 1 ALIGNMENT 638 YS2-9m06.p1k chr08 680 31 140995 141644 C 650 100.00 699 accept_chi 0 ALIGNMENT 1015 YS2-9m07.q1k chr07 38 1235 868965 870165 F 1198 95.99 1268 accept 0 ALIGNMENT 853 YS2-9m07.p1k chr07 1033 32 872369 873382 C 1002 95.81 1154 accept 0 ALIGNMENT 875 YS2-9m08.p1k chr04 1112 31 495344 496429 C 1082 94.82 1181 accept 0 ALIGNMENT 875 YS2-9m08.q1k chr04 31 1136 490953 492049 F 1106 94.48 1209 accept 0 ALIGNMENT 0 YS2-9m08.q1k chr02 62 585 332826 332825 F 524 0.00 1209 reject_low 1 ALIGNMENT 0 YS2-9m08.q1k chr02 641 730 332880 332879 F 90 0.00 1209 reject_low 1 ALIGNMENT 45 YS2-9m08.q1k chr02 586 640 332826 332880 F 55 94.55 1209 reject_low 1 ALIGNMENT 0 YS2-9m09.q1k vc_7 884 62 2728 2727 C 823 0.00 1243 reject_low 3 ALIGNMENT 39 YS2-9m09.q1k vc_5 885 847 5025 5063 C 39 100.00 1243 reject_low 21 ALIGNMENT 0 YS2-9m09.q1k vc_3 844 62 2513 2512 C 783 0.00 1243 reject_low 20 ALIGNMENT 0 YS2-9m09.q1k vc_2 62 884 2164 2163 F 823 0.00 1243 reject_low 10 ALIGNMENT 235 YS2-9m09.q1k vc_1 885 1203 2531 2854 F 319 91.85 1243 reject_low 9 ALIGNMENT 0 YS2-9m09.q1k vc_3 62 884 2531 2530 F 823 0.00 1243 reject_low 11 ALIGNMENT 0 YS2-9m09.q1k vc_4 62 844 5831 5830 F 783 0.00 1243 reject_low 14 ALIGNMENT 0 YS2-9m09.q1k vc_5 846 62 37 36 C 785 0.00 1243 reject_low 24 ALIGNMENT 0 YS2-9m09.p1k vc_3 855 62 2473 2472 C 794 0.00 1162 reject_low 17 ALIGNMENT 41 YS2-9m09.q1k vc_3 885 845 2472 2512 C 41 100.00 1243 reject_low 20 ALIGNMENT 189 YS2-9m09.p1k vc_7 856 1159 13562 13870 F 304 88.82 1162 reject_low 8 ALIGNMENT 0 YS2-9m09.p1k vc_7 62 855 13562 13561 F 794 0.00 1162 reject_low 8 ALIGNMENT 0 YS2-9m09.p1k vc_5 855 62 5026 5025 C 794 0.00 1162 reject_low 2 ALIGNMENT 0 YS2-9m09.p1k vc_1 855 62 2106 2105 C 794 0.00 1162 reject_low 4 ALIGNMENT 0 YS2-9m09.q1k vc_5 846 62 5064 5063 C 785 0.00 1243 reject_low 21 ALIGNMENT 36 YS2-9m09.q1k vc_5 882 847 1 36 C 36 100.00 1243 reject_low 24 ALIGNMENT 26 YS2-9m09.p1k vc_3 886 856 2441 2472 C 31 96.77 1162 reject_low 17 ALIGNMENT 41 YS2-9m09.q1k vc_2 885 845 2105 2145 C 41 100.00 1243 reject_low 19 ALIGNMENT 235 YS2-9m09.q1k vc_5 885 1203 2398 2721 F 319 91.85 1243 reject_low 2 ALIGNMENT 235 YS2-9m09.q1k vc_7 1203 885 2404 2727 C 319 91.85 1243 reject_low 3 ALIGNMENT 0 YS2-9m09.q1k vc_7 1042 62 6412 6411 C 981 0.00 1243 reject_low 25 ALIGNMENT 0 YS2-9m09.q1k vc_2 844 62 2146 2145 C 783 0.00 1243 reject_low 19 ALIGNMENT 26 YS2-9m09.p1k vc_1 886 856 2441 2472 C 31 96.77 1162 reject_low 16 ALIGNMENT 0 YS2-9m09.q1k vc_1 844 62 2513 2512 C 783 0.00 1243 reject_low 18 ALIGNMENT 84 YS2-9m09.q1k vc_4 969 885 1450 1534 C 85 100.00 1243 reject_low 15 ALIGNMENT 0 YS2-9m09.q1k vc_1 62 884 2531 2530 F 823 0.00 1243 reject_low 9 ALIGNMENT 235 YS2-9m09.q1k vc_3 885 1203 2531 2854 F 319 91.85 1243 reject_low 11 ALIGNMENT 228 YS2-9m09.q1k vc_4 1203 885 5487 5812 C 319 91.22 1243 reject_low 12 ALIGNMENT 0 YS2-9m09.q1k vc_5 62 884 2398 2397 F 823 0.00 1243 reject_low 2 ALIGNMENT 189 YS2-9m09.p1k vc_7 856 1159 100 408 F 304 88.82 1162 reject_low 3 ALIGNMENT 0 YS2-9m09.q1k vc_7 62 847 63 62 F 786 0.00 1243 reject_low 22 ALIGNMENT 150 YS2-9m09.q1k vc_4 885 1044 6353 6514 F 160 98.75 1243|1,0 reject_low 14 ALIGNMENT 41 YS2-9m09.q1k vc_1 885 845 2472 2512 C 41 100.00 1243 reject_low 18 ALIGNMENT 0 YS2-9m09.q1k vc_7 1093 1094 5172 6360 C 0 0.00 1243 reject_low 25 ALIGNMENT 0 YS2-9m09.p1k vc_7 62 855 100 99 F 794 0.00 1162 reject_low 3 ALIGNMENT 0 YS2-9m09.p1k vc_1 855 62 2473 2472 C 794 0.00 1162 reject_low 16 ALIGNMENT 770 YS2-9m09.q1k chr10 37 844 398104 398911 F 808 99.38 1243 accept_chi 0 ALIGNMENT 0 YS2-9m09.q1k vc_4 62 884 126 125 F 823 0.00 1243 reject_low 13 ALIGNMENT 44 YS2-9m09.q1k vc_7 1094 1043 6360 6411 C 52 94.23 1243|1,0 reject_low 25 ALIGNMENT 0 YS2-9m09.p1k vc_2 855 62 2106 2105 C 794 0.00 1162 reject_low 5 ALIGNMENT 0 YS2-9m09.p1k vc_4 62 855 5871 5870 F 794 0.00 1162 reject_low 7 ALIGNMENT 189 YS2-9m09.p1k vc_5 1159 856 4717 5025 C 304 88.82 1162 reject_low 2 ALIGNMENT 38 YS2-9m09.q1k vc_7 848 885 63 100 F 38 100.00 1243 reject_low 22 ALIGNMENT 0 YS2-9m09.q1k vc_7 62 847 13525 13524 F 786 0.00 1243 reject_low 23 ALIGNMENT 189 YS2-9m09.p1k vc_4 856 1159 5871 6179 F 304 88.82 1162 reject_low 7 ALIGNMENT 38 YS2-9m09.q1k vc_7 848 885 13525 13562 F 38 100.00 1243 reject_low 23 ALIGNMENT 189 YS2-9m09.p1k vc_1 1159 856 1797 2105 C 304 88.82 1162 reject_low 4 ALIGNMENT 0 YS2-9m09.p1k vc_3 855 62 2106 2105 C 794 0.00 1162 reject_low 6 ALIGNMENT 0 YS2-9m09.q1k vc_4 884 62 5813 5812 C 823 0.00 1243 reject_low 12 ALIGNMENT 0 YS2-9m09.q1k vc_4 884 62 1535 1534 C 823 0.00 1243 reject_low 15 ALIGNMENT 150 YS2-9m09.q1k vc_4 885 1044 126 287 F 160 98.75 1243 reject_low 13 ALIGNMENT 41 YS2-9m09.q1k vc_4 845 885 5831 5871 F 41 100.00 1243 reject_low 14 ALIGNMENT 41 YS2-9m09.q1k vc_7 1203 1093 5059 5172 C 111 80.18 1243|0,1 reject_low 25 ALIGNMENT 189 YS2-9m09.p1k vc_3 1159 856 1797 2105 C 304 88.82 1162 reject_low 6 ALIGNMENT 235 YS2-9m09.q1k vc_2 885 1203 2164 2487 F 319 91.85 1243 reject_low 10 ALIGNMENT 762 YS2-9m09.p1k chr10 837 33 398104 398908 C 805 99.25 1162 accept_chi 1 ALIGNMENT 0 YS2-9m09.q1k vc_4 886 885 5872 6353 F 0 0.00 1243 reject_low 14 ALIGNMENT 189 YS2-9m09.p1k vc_2 1159 856 1797 2105 C 304 88.82 1162 reject_low 5 ALIGNMENT 1057 YS2-9m11.q1k chr10 36 1249 613780 614995 F 1214 96.71 1271 accept 0 ALIGNMENT 951 YS2-9m11.p1k chr10 1174 34 614865 616029 C 1141 95.88 1175 accept 0 ALIGNMENT 944 YS2-9m12.p1k chr08 36 1146 493074 494202 F 1111 95.86 1190 accept 0 ALIGNMENT 988 YS2-9m12.q1k chr08 1169 38 495104 496228 C 1132 97.44 1203 accept 0 ALIGNMENT 40 YS2-9m13.q1k vc_1 221 182 2472 2511 C 40 100.00 221 reject_low 1 ALIGNMENT 39 YS2-9m13.q1k vc_5 221 183 5025 5063 C 39 100.00 221 reject_low 5 ALIGNMENT 40 YS2-9m13.q1k vc_4 182 221 5832 5871 F 40 100.00 221 reject_low 4 ALIGNMENT 0 YS2-9m13.q1k vc_5 182 62 37 36 C 121 0.00 221 reject_low 7 ALIGNMENT 0 YS2-9m13.q1k vc_2 181 62 2145 2144 C 120 0.00 221 reject_low 2 ALIGNMENT 0 YS2-9m13.q1k vc_5 182 62 5064 5063 C 121 0.00 221 reject_low 5 ALIGNMENT 36 YS2-9m13.q1k vc_5 218 183 1 36 C 36 100.00 221 reject_low 7 ALIGNMENT 0 YS2-9m13.q1k chr12 182 221 904435 904434 F 40 0.00 221 accept 0 ALIGNMENT 40 YS2-9m13.q1k vc_3 221 182 2472 2511 C 40 100.00 221 reject_low 3 ALIGNMENT 0 YS2-9m13.q1k vc_1 181 62 2512 2511 C 120 0.00 221 reject_low 1 ALIGNMENT 40 YS2-9m13.q1k vc_2 221 182 2105 2144 C 40 100.00 221 reject_low 2 ALIGNMENT 0 YS2-9m13.q1k vc_7 62 183 13525 13524 F 122 0.00 221 reject_low 6 ALIGNMENT 141 YS2-9m13.q1k chr12 38 181 904292 904435 F 144 100.00 221 accept 0 ALIGNMENT 38 YS2-9m13.q1k vc_7 184 221 13525 13562 F 38 100.00 221 reject_low 6 ALIGNMENT 0 YS2-9m13.q1k vc_3 181 62 2512 2511 C 120 0.00 221 reject_low 3 ALIGNMENT 0 YS2-9m13.q1k vc_4 62 181 5832 5831 F 120 0.00 221 reject_low 4 ALIGNMENT 911 YS2-9m14.q1k chr07 1083 37 598470 599502 C 1047 97.13 1227 accept 0 ALIGNMENT 945 YS2-9m14.p1k chr07 29 1161 593862 595004 F 1133 94.79 1164 accept 0 ALIGNMENT 32 YS2-9m15.p1k chr16 157 75 786294 786376 C 83 79.52 1175 reject_low 1 ALIGNMENT 0 YS2-9m15.p1k chr16 825 158 786295 786294 C 668 0.00 1175 reject_low 1 ALIGNMENT 857 YS2-9m15.p1k chr16 1110 32 785281 786362 C 1079 93.33 1175 accept 0 ALIGNMENT 1015 YS2-9m15.q1k chr16 42 1271 781980 783207 F 1230 95.61 1301 accept 0 ALIGNMENT 1005 YS2-9m17.q1k chr08 37 1206 139637 140808 F 1170 96.15 1213 accept 0 ALIGNMENT 913 YS2-9m17.p1k chr08 1154 32 142869 143995 C 1123 93.32 1164 accept 0 ALIGNMENT 949 YS2-9m18.p1k chr04 27 1165 1333177 1334311 F 1139 95.26 1170 accept 0 ALIGNMENT 977 YS2-9m18.q1k chr04 1161 37 1336553 1337672 C 1125 96.71 1161 accept 0 ALIGNMENT 0 YS2-9m19.q1k vc_5 372 62 37 36 C 311 0.00 411 reject_low 8 ALIGNMENT 42 YS2-9m19.q1k vc_3 411 370 2472 2513 C 42 100.00 411 reject_low 4 ALIGNMENT 0 YS2-9m19.q1k vc_3 369 62 2514 2513 C 308 0.00 411 reject_low 4 ALIGNMENT 0 YS2-9m19.q1k vc_4 62 369 5830 5829 F 308 0.00 411 reject_low 5 ALIGNMENT 38 YS2-9m19.q1k vc_7 374 411 13525 13562 F 38 100.00 411 reject_low 7 ALIGNMENT 0 YS2-9m19.q1k vc_7 62 373 13525 13524 F 312 0.00 411 reject_low 7 ALIGNMENT 36 YS2-9m19.q1k vc_5 408 373 1 36 C 36 100.00 411 reject_low 8 ALIGNMENT 317 YS2-9m19.p1k chr13 365 34 614485 614816 C 332 99.70 384 accept_chi 0 ALIGNMENT 42 YS2-9m19.q1k vc_2 411 370 2105 2146 C 42 100.00 411 reject_low 3 ALIGNMENT 0 YS2-9m19.q1k vc_2 369 62 2147 2146 C 308 0.00 411 reject_low 3 ALIGNMENT 39 YS2-9m19.q1k vc_5 411 373 5025 5063 C 39 100.00 411 reject_low 6 ALIGNMENT 0 YS2-9m19.q1k vc_1 369 62 2514 2513 C 308 0.00 411 reject_low 2 ALIGNMENT 317 YS2-9m19.q1k chr13 39 370 614485 614816 F 332 99.40 411 accept_chi 1 ALIGNMENT 0 YS2-9m19.p1k chr13 384 366 614486 614485 C 19 0.00 384 accept_chi 0 ALIGNMENT 0 YS2-9m19.q1k vc_5 372 62 5064 5063 C 311 0.00 411 reject_low 6 ALIGNMENT 0 YS2-9m19.q1k chr13 371 411 614816 614815 F 41 0.00 411 accept_chi 1 ALIGNMENT 42 YS2-9m19.q1k vc_1 411 370 2472 2513 C 42 100.00 411 reject_low 2 ALIGNMENT 42 YS2-9m19.q1k vc_4 370 411 5830 5871 F 42 100.00 411 reject_low 5 ALIGNMENT 0 YS2-9m20.q1k vc_1 366 62 2514 2513 C 305 0.00 408 reject_low 2 ALIGNMENT 0 YS2-9m20.q1k vc_5 369 62 5064 5063 C 308 0.00 408 reject_low 6 ALIGNMENT 36 YS2-9m20.q1k vc_5 405 370 1 36 C 36 100.00 408 reject_low 8 ALIGNMENT 0 YS2-9m20.q1k vc_5 369 62 37 36 C 308 0.00 408 reject_low 8 ALIGNMENT 0 YS2-9m20.p1k chr13 382 364 614486 614485 C 19 0.00 382 accept_chi 0 ALIGNMENT 317 YS2-9m20.q1k chr13 36 367 614485 614816 F 332 99.70 408 accept_chi 1 ALIGNMENT 39 YS2-9m20.q1k vc_5 408 370 5025 5063 C 39 100.00 408 reject_low 6 ALIGNMENT 317 YS2-9m20.p1k chr13 363 32 614485 614816 C 332 99.70 382 accept_chi 0 ALIGNMENT 0 YS2-9m20.q1k vc_7 62 370 13525 13524 F 309 0.00 408 reject_low 7 ALIGNMENT 42 YS2-9m20.q1k vc_3 408 367 2472 2513 C 42 100.00 408 reject_low 4 ALIGNMENT 38 YS2-9m20.q1k vc_7 371 408 13525 13562 F 38 100.00 408 reject_low 7 ALIGNMENT 42 YS2-9m20.q1k vc_1 408 367 2472 2513 C 42 100.00 408 reject_low 2 ALIGNMENT 0 YS2-9m20.q1k vc_4 62 366 5830 5829 F 305 0.00 408 reject_low 5 ALIGNMENT 0 YS2-9m20.q1k vc_2 366 62 2147 2146 C 305 0.00 408 reject_low 3 ALIGNMENT 42 YS2-9m20.q1k vc_4 367 408 5830 5871 F 42 100.00 408 reject_low 5 ALIGNMENT 42 YS2-9m20.q1k vc_2 408 367 2105 2146 C 42 100.00 408 reject_low 3 ALIGNMENT 0 YS2-9m20.q1k vc_3 366 62 2514 2513 C 305 0.00 408 reject_low 4 ALIGNMENT 0 YS2-9m20.q1k chr13 368 408 614816 614815 F 41 0.00 408 accept_chi 1 ALIGNMENT 907 YS2-9m21.p1k chr11 37 1062 264026 265060 F 1026 96.69 1063 accept 0 ALIGNMENT 974 YS2-9m21.q1k chr11 1197 30 267260 268427 C 1168 96.23 1199 accept 0 ALIGNMENT 1014 YS2-9m23.q1k chr15 38 1173 422954 424089 F 1136 97.54 1197 accept 0 ALIGNMENT 936 YS2-9m23.p1k chr15 1124 28 426442 427532 C 1097 96.26 1124 accept 0 ALIGNMENT 900 YS2-9n02.q1k chr09 34 1021 117407 118395 F 988 97.57 1166 accept 0 ALIGNMENT 650 YS2-9n02.p1k chr09 832 33 120843 121637 C 800 95.75 1224 accept 0 ALIGNMENT 1001 YS2-9n03.p1k chr10 1182 31 676400 677550 C 1152 96.79 1183 accept 0 ALIGNMENT 903 YS2-9n03.q1k chr10 32 1095 676096 677144 F 1064 96.62 1214 accept 0 ALIGNMENT 674 YS2-9n04.q1k chr07 36 824 818822 819609 F 789 97.08 1190 ambiguous_trans 0 ALIGNMENT 1025 YS2-9n04.p1k chr12 1200 38 480362 481522 C 1163 96.56 1209 ambiguous_trans 11 ALIGNMENT 629 YS2-9n04.q1k chr14 800 36 522872 523637 C 765 95.95 1190 reject_low 28 ALIGNMENT 599 YS2-9n04.q1k chr10 790 36 476116 476872 C 755 94.97 1190 reject_low 31 ALIGNMENT 665 YS2-9n04.q1k chr07 36 790 563273 564029 F 755 97.88 1190 ambiguous_trans 3 ALIGNMENT 621 YS2-9n04.p1k chr08 1200 470 547992 548720 C 731 95.49 1209 reject_low 23 ALIGNMENT 641 YS2-9n04.q1k chr10 790 36 481700 482456 C 755 96.82 1190 ambiguous_trans 9 ALIGNMENT 638 YS2-9n04.q1k chr04 36 790 988145 988901 F 755 96.69 1190 ambiguous_trans 10 ALIGNMENT 1001 YS2-9n04.p1k chr01 1200 38 164627 165787 C 1163 95.96 1209 reject_low 20 ALIGNMENT 561 YS2-9n04.p1k chr13 1193 39 361393 362545 C 1155 83.38 1209 reject_low 22 ALIGNMENT 623 YS2-9n04.q1k chr05 36 824 493921 494708 F 789 94.93 1190 ambiguous_trans 5 ALIGNMENT 1025 YS2-9n04.p1k chr04 1200 38 991103 992263 C 1163 96.56 1209 ambiguous_trans 10 ALIGNMENT 638 YS2-9n04.q1k chr12 36 790 477404 478160 F 755 96.69 1190 ambiguous_trans 11 ALIGNMENT 528 YS2-9n04.p1k chr08 585 38 548719 549266 C 548 99.64 1209 reject_low 24 ALIGNMENT 635 YS2-9n04.q1k chr15 790 36 121441 122197 C 755 96.56 1190 reject_low 30 ALIGNMENT 0 YS2-9n04.p1k chr08 879 586 548720 548719 C 294 0.00 1209 reject_low 24 ALIGNMENT 0 YS2-9n04.p1k chr08 469 62 548721 548720 C 408 0.00 1209 reject_low 23 ALIGNMENT 1025 YS2-9n04.p1k chr05 1200 38 447780 448940 C 1163 96.56 1209 ambiguous_trans 13 ALIGNMENT 644 YS2-9n04.q1k chr02 824 36 224744 225531 C 789 95.82 1190 reject_low 26 ALIGNMENT 665 YS2-9n04.q1k chr04 36 790 646923 647679 F 755 97.88 1190 ambiguous_trans 1 ALIGNMENT 665 YS2-9n04.q1k chr13 790 36 187903 188659 C 755 97.88 1190 ambiguous_trans 4 ALIGNMENT 1019 YS2-9n04.p1k chr16 1200 38 855013 856173 C 1163 96.39 1209 ambiguous_trans 15 ALIGNMENT 1040 YS2-9n04.p1k chr13 38 1200 184541 185701 F 1163 96.99 1209 ambiguous_trans 4 ALIGNMENT 1043 YS2-9n04.p1k chr07 1200 38 566231 567391 C 1163 97.08 1209 ambiguous_trans 3 ALIGNMENT 611 YS2-9n04.q1k chr16 36 790 806067 806823 F 755 95.50 1190 reject_low 16 ALIGNMENT 638 YS2-9n04.q1k chr16 790 36 60190 60946 C 755 96.69 1190 ambiguous_trans 12 ALIGNMENT 1040 YS2-9n04.p1k chr05 1200 38 496879 498039 C 1163 96.99 1209 ambiguous_trans 5 ALIGNMENT 638 YS2-9n04.q1k chr04 790 36 1210429 1211185 C 755 96.69 1190 reject_low 29 ALIGNMENT 1040 YS2-9n04.p1k chr13 1200 38 377084 378244 C 1163 96.99 1209 ambiguous_trans 8 ALIGNMENT 608 YS2-9n04.q1k chr16 36 824 852055 852842 F 789 94.30 1190 ambiguous_trans 15 ALIGNMENT 1037 YS2-9n04.p1k chr15 38 1200 595192 596352 F 1163 96.90 1209 ambiguous_trans 7 ALIGNMENT 626 YS2-9n04.q1k chr13 36 790 374126 374882 F 755 96.16 1190 ambiguous_trans 8 ALIGNMENT 1043 YS2-9n04.p1k chr04 1200 38 649881 651041 C 1163 97.08 1209 ambiguous_trans 1 ALIGNMENT 641 YS2-9n04.q1k chr07 790 36 539503 540259 C 755 96.82 1190 reject_low 27 ALIGNMENT 1025 YS2-9n04.p1k chr12 38 1200 651199 652359 F 1163 96.56 1209 reject_low 19 ALIGNMENT 1043 YS2-9n04.p1k chr07 1200 38 821780 822940 C 1163 97.08 1209 ambiguous_trans 0 ALIGNMENT 665 YS2-9n04.q1k chr04 790 36 1099501 1100257 C 755 97.88 1190 ambiguous_trans 2 ALIGNMENT 1001 YS2-9n04.p1k chr16 1200 38 809025 810185 C 1163 95.96 1209 reject_low 16 ALIGNMENT 1025 YS2-9n04.p1k chr16 38 1200 56828 57988 F 1163 96.56 1209 ambiguous_trans 12 ALIGNMENT 635 YS2-9n04.q1k chr13 790 36 200070 200826 C 755 96.56 1190 ambiguous_trans 14 ALIGNMENT 1025 YS2-9n04.p1k chr10 38 1200 472754 473914 F 1163 96.56 1209 ambiguous_trans 9 ALIGNMENT 653 YS2-9n04.q1k chr02 824 36 263281 264068 C 789 96.20 1190 reject_low 25 ALIGNMENT 644 YS2-9n04.q1k chr15 790 36 598554 599310 C 755 96.95 1190 ambiguous_trans 7 ALIGNMENT 1025 YS2-9n04.p1k chr13 38 1200 196708 197868 F 1163 96.56 1209 ambiguous_trans 14 ALIGNMENT 635 YS2-9n04.q1k chr05 36 790 444822 445578 F 755 96.56 1190 ambiguous_trans 13 ALIGNMENT 665 YS2-9n04.q1k chr16 790 36 848150 848906 C 755 97.88 1190 ambiguous_trans 6 ALIGNMENT 1037 YS2-9n04.p1k chr16 38 1200 844785 845945 F 1163 96.90 1209 ambiguous_trans 6 ALIGNMENT 647 YS2-9n04.q1k chr13 36 824 358428 359215 F 789 95.94 1190 reject_low 22 ALIGNMENT 1037 YS2-9n04.p1k chr04 1200 38 882682 883842 C 1163 96.90 1209 reject_low 18 ALIGNMENT 1040 YS2-9n04.p1k chr12 1200 38 219469 220629 C 1163 96.99 1209 reject_low 17 ALIGNMENT 1001 YS2-9n04.p1k chr10 38 1200 478338 479498 F 1163 95.96 1209 reject_low 21 ALIGNMENT 1043 YS2-9n04.p1k chr04 38 1200 1096139 1097299 F 1163 97.08 1209 ambiguous_trans 2 ALIGNMENT 922 YS2-9n06.q1k chr16 37 1114 479777 480843 F 1078 96.66 1216 accept 0 ALIGNMENT 985 YS2-9n06.p1k chr16 1179 29 483744 484896 C 1151 95.40 1186 accept 0 ALIGNMENT 550 YS2-9n06.p1k chr07 29 971 480703 481644 F 943 86.64 1186 reject_low 1 ALIGNMENT 927 YS2-9n07.q1k chr04 1123 32 699432 700510 C 1092 96.43 1276 accept 0 ALIGNMENT 901 YS2-9n07.p1k chr04 25 1035 697979 698995 F 1011 96.93 1165 accept 0 ALIGNMENT 40 YS2-9n08.q1k vc_5 299 257 5025 5067 C 43 97.67 299 reject_low 8 ALIGNMENT 0 YS2-9n08.p1k scplasm1 271 254 871 870 C 18 0.00 271 accept_chi 0 ALIGNMENT 0 YS2-9n08.q1k scplasm1 299 105 3715 3714 C 195 0.00 299 reject_low 2 ALIGNMENT 0 YS2-9n08.q1k vc_2 258 62 2146 2145 C 197 0.00 299 reject_low 5 ALIGNMENT 38 YS2-9n08.q1k vc_7 262 299 13525 13562 F 38 100.00 299 reject_low 9 ALIGNMENT 41 YS2-9n08.q1k vc_1 299 259 2472 2512 C 41 100.00 299 reject_low 4 ALIGNMENT 0 YS2-9n08.q1k vc_4 62 258 5831 5830 F 197 0.00 299 reject_low 7 ALIGNMENT 0 YS2-9n08.q1k vc_3 258 62 2513 2512 C 197 0.00 299 reject_low 6 ALIGNMENT 0 YS2-9n08.q1k vc_5 256 62 41 40 C 195 0.00 299 reject_low 10 ALIGNMENT 41 YS2-9n08.q1k vc_3 299 259 2472 2512 C 41 100.00 299 reject_low 6 ALIGNMENT 37 YS2-9n08.q1k vc_5 296 257 1 40 C 40 97.50 299 reject_low 10 ALIGNMENT 0 YS2-9n08.p1k scplasm1 62 183 3714 3713 F 122 0.00 271 reject_low 3 ALIGNMENT 180 YS2-9n08.p1k scplasm1 253 31 870 1092 C 223 94.62 271 accept_chi 0 ALIGNMENT 177 YS2-9n08.q1k scplasm1 35 258 870 1092 F 224 94.20 299 accept_chi 1 ALIGNMENT 0 YS2-9n08.q1k vc_5 256 62 5068 5067 C 195 0.00 299 reject_low 8 ALIGNMENT 0 YS2-9n08.q1k vc_7 62 261 13525 13524 F 200 0.00 299 reject_low 9 ALIGNMENT 49 YS2-9n08.p1k scplasm1 184 253 3714 3783 F 70 92.86 271 reject_low 3 ALIGNMENT 0 YS2-9n08.q1k scplasm1 259 299 1092 1091 F 41 0.00 299 accept_chi 1 ALIGNMENT 49 YS2-9n08.q1k scplasm1 104 35 3714 3783 C 70 92.86 299 reject_low 2 ALIGNMENT 0 YS2-9n08.p1k scplasm1 254 271 3783 3782 F 18 0.00 271 reject_low 3 ALIGNMENT 0 YS2-9n08.q1k vc_1 258 62 2513 2512 C 197 0.00 299 reject_low 4 ALIGNMENT 41 YS2-9n08.q1k vc_2 299 259 2105 2145 C 41 100.00 299 reject_low 5 ALIGNMENT 41 YS2-9n08.q1k vc_4 259 299 5831 5871 F 41 100.00 299 reject_low 7 ALIGNMENT 0 YS2-9n09.q1k chr11 62 143 76144 76143 F 82 0.00 1244 reject_low 1 ALIGNMENT 25 YS2-9n09.q1k chr11 144 180 76144 76180 F 37 94.59 1244 reject_low 1 ALIGNMENT 951 YS2-9n09.p1k chr11 1112 44 76016 77084 C 1069 97.85 1167 accept 0 ALIGNMENT 847 YS2-9n09.q1k chr11 48 1052 76015 77006 F 1005 96.92 1244 accept 0 ALIGNMENT 0 YS2-9n09.q1k chr11 181 764 76180 76179 F 584 0.00 1244 reject_low 1 ALIGNMENT 979 YS2-9n10.p1k chr14 30 1162 701326 702465 F 1133 95.94 1163 accept 0 ALIGNMENT 845 YS2-9n10.q1k chr14 1028 39 704768 705749 C 990 96.67 1217 accept 0 ALIGNMENT 0 YS2-9n12.p1k chr12 881 341 1002499 1002498 C 541 0.00 1179 reject_low 2 ALIGNMENT 0 YS2-9n12.q1k chr09 313 62 23506 23505 C 252 0.00 1230 reject_low 8 ALIGNMENT 0 YS2-9n12.q1k chr09 316 62 23716 23715 C 255 0.00 1230 reject_low 10 ALIGNMENT 0 YS2-9n12.q1k chr09 406 62 23950 23949 C 345 0.00 1230 reject_low 9 ALIGNMENT 127 YS2-9n12.q1k chr09 492 311 23435 23616 C 182 90.66 1230 reject_low 5 ALIGNMENT 890 YS2-9n12.p1k chr08 1153 27 553502 554654 C 1127 94.50 1179 accept_trans 0 ALIGNMENT 0 YS2-9n12.q1k chr08 62 418 543187 543186 F 357 0.00 1230 reject_low 14 ALIGNMENT 0 YS2-9n12.q1k chr09 157 62 24091 24090 C 96 0.00 1230 reject_low 4 ALIGNMENT 0 YS2-9n12.q1k chr09 313 62 23827 23826 C 252 0.00 1230 reject_low 7 ALIGNMENT 0 YS2-9n12.q1k chr08 487 831 543254 543253 F 345 0.00 1230 reject_low 14 ALIGNMENT 0 YS2-9n12.q1k chr09 310 62 23404 23403 C 249 0.00 1230 reject_low 11 ALIGNMENT 0 YS2-9n12.q1k chr01 487 831 222643 222642 F 345 0.00 1230 reject_low 17 ALIGNMENT 0 YS2-9n12.q1k chr15 134 62 29544 29543 C 73 0.00 1230 reject_low 3 ALIGNMENT 52 YS2-9n12.q1k chr01 422 486 222579 222643 F 65 93.85 1230 reject_low 17 ALIGNMENT 0 YS2-9n12.q1k chr09 831 494 23756 23755 C 338 0.00 1230 reject_low 4 ALIGNMENT 0 YS2-9n12.q1k chr09 831 406 23310 23309 C 426 0.00 1230 reject_low 11 ALIGNMENT 0 YS2-9n12.q1k chr01 62 313 222687 222686 F 252 0.00 1230 reject_low 12 ALIGNMENT 60 YS2-9n12.q1k chr09 486 317 23549 23715 C 170 80.00 1230 reject_low 10 ALIGNMENT 0 YS2-9n12.q1k chr09 831 509 23315 23314 C 323 0.00 1230 reject_low 8 ALIGNMENT 167 YS2-9n12.q1k chr08 729 1080 549638 549986 F 352 86.65 1230|3,0 accept_trans 0 ALIGNMENT 203 YS2-9n12.q1k chr15 492 135 29186 29543 C 358 86.31 1230 reject_low 3 ALIGNMENT 605 YS2-9n12.p1k chr01 986 27 227037 227991 C 960 89.17 1179 reject_low 1 ALIGNMENT 0 YS2-9n12.q1k chr09 831 487 23550 23549 C 345 0.00 1230 reject_low 10 ALIGNMENT 0 YS2-9n12.q1k chr08 732 731 543608 549640 F 0 0.00 1230 accept_trans 0 ALIGNMENT 154 YS2-9n12.q1k chr09 493 158 23755 24090 C 336 82.74 1230 reject_low 4 ALIGNMENT 0 YS2-9n12.q1k chr15 831 487 29301 29300 C 345 0.00 1230 reject_low 16 ALIGNMENT 52 YS2-9n12.q1k chr01 314 378 222687 222751 F 65 93.85 1230 reject_low 12 ALIGNMENT 53 YS2-9n12.q1k chr09 508 407 23848 23949 C 102 85.29 1230 reject_low 9 ALIGNMENT 0 YS2-9n12.q1k chr09 310 62 23617 23616 C 249 0.00 1230 reject_low 5 ALIGNMENT 48 YS2-9n12.q1k chr15 405 311 29060 29154 C 95 84.21 1230 reject_low 15 ALIGNMENT 66 YS2-9n12.q1k chr09 508 314 23314 23505 C 195 79.49 1230 reject_low 8 ALIGNMENT 74 YS2-9n12.q1k chr09 493 314 23647 23826 C 180 81.11 1230 reject_low 7 ALIGNMENT 69 YS2-9n12.q1k chr15 508 314 29065 29256 C 195 80.00 1230 reject_low 6 ALIGNMENT 0 YS2-9n12.q1k chr15 313 62 29257 29256 C 252 0.00 1230 reject_low 6 ALIGNMENT 0 YS2-9n12.q1k chr08 62 313 543298 543297 F 252 0.00 1230 reject_low 13 ALIGNMENT 55 YS2-9n12.q1k chr08 419 486 543187 543254 F 68 94.12 1230 reject_low 14 ALIGNMENT 668 YS2-9n12.q1k chr08 40 734 542915 543610 F 695 99.42 1230|0,3 accept_trans 0 ALIGNMENT 844 YS2-9n12.q1k chr01 40 1080 222304 223341 F 1041 95.39 1230 reject_low 1 ALIGNMENT 0 YS2-9n12.q1k chr15 310 62 29155 29154 C 249 0.00 1230 reject_low 15 ALIGNMENT 163 YS2-9n12.p1k chr12 340 27 1002498 1002811 C 314 84.39 1179 reject_low 2 ALIGNMENT 0 YS2-9n12.q1k chr09 831 494 23648 23647 C 338 0.00 1230 reject_low 7 ALIGNMENT 51 YS2-9n12.q1k chr09 405 311 23309 23403 C 95 85.26 1230 reject_low 11 ALIGNMENT 0 YS2-9n12.q1k chr08 379 831 543362 543361 F 453 0.00 1230 reject_low 13 ALIGNMENT 0 YS2-9n12.q1k chr15 831 509 29066 29065 C 323 0.00 1230 reject_low 6 ALIGNMENT 52 YS2-9n12.q1k chr08 314 378 543298 543362 F 65 93.85 1230 reject_low 13 ALIGNMENT 0 YS2-9n12.q1k chr15 406 62 29380 29379 C 345 0.00 1230 reject_low 16 ALIGNMENT 0 YS2-9n12.q1k chr01 379 831 222751 222750 F 453 0.00 1230 reject_low 12 ALIGNMENT 0 YS2-9n12.q1k chr09 831 509 23849 23848 C 323 0.00 1230 reject_low 9 ALIGNMENT 0 YS2-9n12.q1k chr01 62 421 222579 222578 F 360 0.00 1230 reject_low 17 ALIGNMENT 0 YS2-9n12.q1k chr15 831 493 29187 29186 C 339 0.00 1230 reject_low 3 ALIGNMENT 53 YS2-9n12.q1k chr15 486 407 29300 29379 C 80 90.00 1230 reject_low 16 ALIGNMENT 0 YS2-9n12.q1k chr09 831 493 23436 23435 C 339 0.00 1230 reject_low 5 ALIGNMENT 0 YS2-9n12.q1k chr15 831 406 29061 29060 C 426 0.00 1230 reject_low 15 ALIGNMENT 0 YS2-9n13.p1k vc_1 640 609 2442 2441 C 32 0.00 1326 reject_low 22 ALIGNMENT 26 YS2-9n13.p1k vc_1 608 578 2441 2472 C 31 96.77 1326 reject_low 22 ALIGNMENT 307 YS2-9n13.p1k vc_1 1186 578 1508 2105 C 609 84.89 1326 reject_low 3 ALIGNMENT 33 YS2-9n13.q1k vc_4 439 479 5831 5870 F 41 95.12 1263 reject_low 14 ALIGNMENT 230 YS2-9n13.q1k vc_7 834 481 2374 2726 C 354 89.27 1263 reject_low 2 ALIGNMENT 230 YS2-9n13.q1k vc_3 481 834 2532 2884 F 354 89.27 1263 reject_low 11 ALIGNMENT 230 YS2-9n13.q1k vc_1 481 834 2532 2884 F 354 89.27 1263 reject_low 9 ALIGNMENT 0 YS2-9n13.q1k vc_7 690 691 5172 6360 C 0 0.00 1263 reject_low 16 ALIGNMENT 0 YS2-9n13.q1k vc_4 480 480 5871 6353 F 1 0.00 1263 reject_low 14 ALIGNMENT 29 YS2-9n13.q1k vc_5 477 441 1 36 C 37 94.59 1263 reject_low 21 ALIGNMENT 0 YS2-9n13.p1k chr02 640 561 114070 114069 C 80 0.00 1326 reject_low 7 ALIGNMENT 33 YS2-9n13.q1k vc_2 479 439 2106 2145 C 41 95.12 1263 reject_low 18 ALIGNMENT 56 YS2-9n13.q1k vc_7 834 690 5029 5172 C 145 80.69 1263|0,1 reject_low 16 ALIGNMENT 31 YS2-9n13.q1k vc_5 479 441 5026 5063 C 39 94.87 1263 reject_low 20 ALIGNMENT 51 YS2-9n13.q1k vc_7 691 640 6360 6411 C 52 100.00 1263|1,0 reject_low 16 ALIGNMENT 33 YS2-9n13.q1k vc_1 479 439 2473 2512 C 41 95.12 1263 reject_low 17 ALIGNMENT 223 YS2-9n13.q1k vc_4 834 481 5457 5811 C 354 88.70 1263 reject_low 12 ALIGNMENT 307 YS2-9n13.p1k vc_5 1186 578 4428 5025 C 609 84.89 1326 reject_low 1 ALIGNMENT 122 YS2-9n13.q1k vc_4 481 641 6354 6514 F 161 93.17 1263 reject_low 14 ALIGNMENT 307 YS2-9n13.p1k vc_7 578 1186 100 697 F 609 85.06 1326 reject_low 2 ALIGNMENT 149 YS2-9n13.p1k chr02 560 388 114069 114238 C 173 97.69 1326 reject_low 7 ALIGNMENT 33 YS2-9n13.q1k vc_3 479 439 2473 2512 C 41 95.12 1263 reject_low 19 ALIGNMENT 230 YS2-9n13.q1k vc_2 481 834 2165 2517 F 354 89.27 1263 reject_low 10 ALIGNMENT 122 YS2-9n13.q1k vc_4 481 641 127 287 F 161 93.17 1263 reject_low 13 ALIGNMENT 307 YS2-9n13.p1k vc_3 1186 578 1508 2105 C 609 84.89 1326 reject_low 5 ALIGNMENT 70 YS2-9n13.q1k vc_4 569 481 1446 1533 C 89 94.38 1263 reject_low 15 ALIGNMENT 307 YS2-9n13.p1k vc_7 578 1186 13562 14159 F 609 85.06 1326 reject_low 6 ALIGNMENT 26 YS2-9n13.p1k vc_3 608 578 2441 2472 C 31 96.77 1326 reject_low 23 ALIGNMENT 230 YS2-9n13.q1k vc_5 481 834 2399 2751 F 354 89.27 1263 reject_low 1 ALIGNMENT 307 YS2-9n13.p1k vc_2 1186 578 1508 2105 C 609 84.89 1326 reject_low 4 ALIGNMENT 262 YS2-9n13.p1k vc_4 578 921 5871 6214 F 344 92.44 1326 reject_low 8 ALIGNMENT 0 YS2-9n13.p1k vc_3 640 609 2442 2441 C 32 0.00 1326 reject_low 23 ALIGNMENT 322 YS2-9n13.q1k chr02 36 438 114069 114469 F 403 94.54 1263 accept 0 ALIGNMENT 123 YS2-9n14.p1k chr10 183 56 415835 415962 C 128 99.22 288 reject_low 2 ALIGNMENT 0 YS2-9n14.q1k vc_5 273 62 5064 5063 C 212 0.00 312 reject_low 15 ALIGNMENT 0 YS2-9n14.q1k chr10 244 312 415962 415961 F 69 0.00 312 reject_low 3 ALIGNMENT 40 YS2-9n14.q1k vc_1 312 273 2472 2511 C 40 100.00 312 reject_low 12 ALIGNMENT 0 YS2-9n14.q1k chr07 238 312 878825 878824 F 75 0.00 312 reject_low 8 ALIGNMENT 0 YS2-9n14.q1k vc_5 273 62 37 36 C 212 0.00 312 reject_low 17 ALIGNMENT 112 YS2-9n14.q1k chr11 237 112 302558 302683 C 126 96.83 312 reject_low 6 ALIGNMENT 0 YS2-9n14.p1k chr11 188 288 302683 302682 F 101 0.00 288 reject_low 7 ALIGNMENT 0 YS2-9n14.q1k chr16 62 115 56158 56157 F 54 0.00 312 reject_low 5 ALIGNMENT 40 YS2-9n14.q1k vc_4 273 312 5832 5871 F 40 100.00 312 reject_low 14 ALIGNMENT 112 YS2-9n14.q1k chr07 115 237 878703 878825 F 123 97.56 312 reject_low 8 ALIGNMENT 0 YS2-9n14.q1k chr07 238 312 287466 287465 F 75 0.00 312 reject_low 11 ALIGNMENT 38 YS2-9n14.q1k vc_7 275 312 13525 13562 F 38 100.00 312 reject_low 16 ALIGNMENT 0 YS2-9n14.p1k chr10 288 184 415836 415835 C 105 0.00 288 reject_low 2 ALIGNMENT 228 YS2-9n14.q1k chr13 29 272 379205 379447 F 244 98.77 312 accept_chi 1 ALIGNMENT 0 YS2-9n14.q1k chr16 244 312 56285 56284 F 69 0.00 312 reject_low 5 ALIGNMENT 0 YS2-9n14.q1k vc_1 272 62 2512 2511 C 211 0.00 312 reject_low 12 ALIGNMENT 40 YS2-9n14.q1k vc_3 312 273 2472 2511 C 40 100.00 312 reject_low 13 ALIGNMENT 0 YS2-9n14.q1k chr10 62 115 415835 415834 F 54 0.00 312 reject_low 3 ALIGNMENT 0 YS2-9n14.p1k chr07 288 185 878704 878703 C 104 0.00 288 reject_low 9 ALIGNMENT 0 YS2-9n14.q1k chr13 273 312 379447 379446 F 40 0.00 312 accept_chi 1 ALIGNMENT 39 YS2-9n14.q1k vc_5 312 274 5025 5063 C 39 100.00 312 reject_low 15 ALIGNMENT 0 YS2-9n14.q1k vc_3 272 62 2512 2511 C 211 0.00 312 reject_low 13 ALIGNMENT 123 YS2-9n14.q1k chr10 116 243 415835 415962 F 128 99.22 312 reject_low 3 ALIGNMENT 36 YS2-9n14.q1k vc_5 309 274 1 36 C 36 100.00 312 reject_low 17 ALIGNMENT 108 YS2-9n14.q1k chr07 123 237 287352 287466 F 115 98.26 312 reject_low 11 ALIGNMENT 0 YS2-9n14.q1k chr07 62 122 287352 287351 F 61 0.00 312 reject_low 11 ALIGNMENT 0 YS2-9n14.q1k chr11 312 238 302559 302558 C 75 0.00 312 reject_low 6 ALIGNMENT 117 YS2-9n14.q1k chr16 116 243 56158 56285 F 128 97.66 312 reject_low 5 ALIGNMENT 0 YS2-9n14.q1k chr07 62 114 878703 878702 F 53 0.00 312 reject_low 8 ALIGNMENT 0 YS2-9n14.p1k chr16 288 184 56159 56158 C 105 0.00 288 reject_low 4 ALIGNMENT 0 YS2-9n14.q1k vc_7 62 274 13525 13524 F 213 0.00 312 reject_low 16 ALIGNMENT 117 YS2-9n14.p1k chr16 183 56 56158 56285 C 128 97.66 288 reject_low 4 ALIGNMENT 0 YS2-9n14.p1k chr07 288 177 287353 287352 C 112 0.00 288 reject_low 10 ALIGNMENT 112 YS2-9n14.p1k chr07 184 62 878703 878825 C 123 97.56 288 reject_low 9 ALIGNMENT 0 YS2-9n14.p1k chr13 288 270 379206 379205 C 19 0.00 288 accept_chi 0 ALIGNMENT 112 YS2-9n14.p1k chr11 62 187 302558 302683 F 126 96.83 288 reject_low 7 ALIGNMENT 232 YS2-9n14.p1k chr13 269 27 379205 379447 C 243 99.18 288 accept_chi 0 ALIGNMENT 108 YS2-9n14.p1k chr07 176 62 287352 287466 C 115 98.26 288 reject_low 10 ALIGNMENT 0 YS2-9n14.q1k vc_4 62 272 5832 5831 F 211 0.00 312 reject_low 14 ALIGNMENT 0 YS2-9n14.q1k chr11 111 62 302684 302683 C 50 0.00 312 reject_low 6 ALIGNMENT 0 YS2-9n15.q1k vc_5 62 510 2399 2398 F 449 0.00 1292 reject_low 5 ALIGNMENT 245 YS2-9n15.q1k vc_7 843 511 2398 2726 C 333 92.49 1292 reject_low 6 ALIGNMENT 0 YS2-9n15.q1k vc_5 471 62 37 36 C 410 0.00 1292 reject_low 17 ALIGNMENT 245 YS2-9n15.q1k vc_3 511 843 2532 2860 F 333 92.49 1292 reject_low 4 ALIGNMENT 0 YS2-9n15.q1k vc_4 62 468 5830 5829 F 407 0.00 1292 reject_low 9 ALIGNMENT 41 YS2-9n15.q1k vc_3 509 469 2473 2513 C 41 100.00 1292 reject_low 14 ALIGNMENT 41 YS2-9n15.q1k vc_2 509 469 2106 2146 C 41 100.00 1292 reject_low 13 ALIGNMENT 0 YS2-9n15.q1k vc_7 510 598 13561 13560 F 89 0.00 1292 reject_low 16 ALIGNMENT 0 YS2-9n15.q1k vc_4 510 62 5812 5811 C 449 0.00 1292 reject_low 7 ALIGNMENT 0 YS2-9n15.p1k chr12 455 473 55759 55758 F 19 0.00 473 accept_chi 1 ALIGNMENT 0 YS2-9n15.q1k vc_5 598 510 5027 5026 C 89 0.00 1292 reject_low 15 ALIGNMENT 0 YS2-9n15.q1k vc_1 598 510 2474 2473 C 89 0.00 1292 reject_low 12 ALIGNMENT 245 YS2-9n15.q1k vc_1 511 843 2532 2860 F 333 92.49 1292 reject_low 2 ALIGNMENT 147 YS2-9n15.q1k vc_4 511 671 127 287 F 161 97.52 1292 reject_low 8 ALIGNMENT 0 YS2-9n15.q1k vc_7 669 62 6412 6411 C 608 0.00 1292 reject_low 11 ALIGNMENT 245 YS2-9n15.q1k vc_5 511 843 2399 2727 F 333 92.49 1292 reject_low 5 ALIGNMENT 240 YS2-9n15.q1k vc_4 843 511 5481 5811 C 333 92.19 1292 reject_low 7 ALIGNMENT 0 YS2-9n15.q1k vc_2 598 510 2107 2106 C 89 0.00 1292 reject_low 13 ALIGNMENT 0 YS2-9n15.q1k vc_7 62 472 13525 13524 F 411 0.00 1292 reject_low 16 ALIGNMENT 84 YS2-9n15.q1k vc_4 598 511 1446 1533 C 88 98.86 1292 reject_low 10 ALIGNMENT 0 YS2-9n15.q1k vc_2 468 62 2147 2146 C 407 0.00 1292 reject_low 13 ALIGNMENT 0 YS2-9n15.q1k chr12 598 470 55331 55330 C 129 0.00 1292 accept_chi 0 ALIGNMENT 37 YS2-9n15.q1k vc_7 473 509 13525 13561 F 37 100.00 1292 reject_low 16 ALIGNMENT 0 YS2-9n15.q1k vc_1 62 510 2532 2531 F 449 0.00 1292 reject_low 2 ALIGNMENT 147 YS2-9n15.q1k vc_4 511 671 6354 6514 F 161 97.52 1292 reject_low 9 ALIGNMENT 399 YS2-9n15.p1k chr12 25 454 55330 55759 F 430 98.84 473 accept_chi 1 ALIGNMENT 38 YS2-9n15.q1k vc_5 509 472 5026 5063 C 38 100.00 1292 reject_low 15 ALIGNMENT 0 YS2-9n15.q1k vc_5 471 62 5064 5063 C 410 0.00 1292 reject_low 15 ALIGNMENT 41 YS2-9n15.q1k vc_1 509 469 2473 2513 C 41 100.00 1292 reject_low 12 ALIGNMENT 0 YS2-9n15.q1k vc_1 468 62 2514 2513 C 407 0.00 1292 reject_low 12 ALIGNMENT 0 YS2-9n15.q1k vc_3 62 510 2532 2531 F 449 0.00 1292 reject_low 4 ALIGNMENT 0 YS2-9n15.q1k vc_7 510 62 2727 2726 C 449 0.00 1292 reject_low 6 ALIGNMENT 0 YS2-9n15.q1k vc_5 598 508 2 1 C 91 0.00 1292 reject_low 17 ALIGNMENT 0 YS2-9n15.q1k vc_4 62 510 127 126 F 449 0.00 1292 reject_low 8 ALIGNMENT 0 YS2-9n15.q1k vc_2 62 510 2165 2164 F 449 0.00 1292 reject_low 3 ALIGNMENT 41 YS2-9n15.q1k vc_4 469 509 5830 5870 F 41 100.00 1292 reject_low 9 ALIGNMENT 245 YS2-9n15.q1k vc_2 511 843 2165 2493 F 333 92.49 1292 reject_low 3 ALIGNMENT 36 YS2-9n15.q1k vc_5 507 472 1 36 C 36 100.00 1292 reject_low 17 ALIGNMENT 0 YS2-9n15.q1k vc_4 510 510 5871 6353 F 1 0.00 1292 reject_low 9 ALIGNMENT 0 YS2-9n15.q1k vc_3 468 62 2514 2513 C 407 0.00 1292 reject_low 14 ALIGNMENT 0 YS2-9n15.q1k vc_3 598 510 2474 2473 C 89 0.00 1292 reject_low 14 ALIGNMENT 400 YS2-9n15.q1k chr12 469 42 55330 55757 C 428 98.83 1292 accept_chi 0 ALIGNMENT 0 YS2-9n15.q1k vc_4 510 62 1534 1533 C 449 0.00 1292 reject_low 10 ALIGNMENT 44 YS2-9n15.q1k vc_7 720 670 6361 6411 C 51 96.08 1292 reject_low 11 ALIGNMENT 533 YS2-9n16.p1k chr05 959 248 5454 6136 C 712 93.82 1170 reject_low 33 ALIGNMENT 748 YS2-9n16.q1k chr07 866 39 1084646 1085469 C 828 97.71 1190 reject_low 5 ALIGNMENT 0 YS2-9n16.q1k chr08 719 826 4951 4950 F 108 0.00 1190 reject_low 27 ALIGNMENT 746 YS2-9n16.q1k chr15 866 39 1084910 1085728 C 828 97.83 1190 reject_low 11 ALIGNMENT 0 YS2-9n16.p1k chr12 130 62 5367 5366 C 69 0.00 1170 reject_low 19 ALIGNMENT 0 YS2-9n16.q1k chr13 62 864 5902 5901 F 803 0.00 1190 reject_low 37 ALIGNMENT 656 YS2-9n16.p1k chr02 959 248 4750 5461 C 712 98.03 1170 reject_low 32 ALIGNMENT 50 YS2-9n16.p1k chr04 28 106 1524950 1525030 F 79 89.87 1170 reject_low 6,29 ALIGNMENT 527 YS2-9n16.p1k chr12 248 959 1065530 1066212 F 712 93.54 1170 reject_low 2 ALIGNMENT 0 YS2-9n16.p1k chr08 221 839 557370 557369 F 619 0.00 1170 reject_low 30 ALIGNMENT 741 YS2-9n16.q1k chr12 39 866 10084 10901 F 828 97.71 1190 reject_low 12 ALIGNMENT 0 YS2-9n16.q1k chr05 62 776 6137 6136 F 715 0.00 1190 reject_low 40 ALIGNMENT 751 YS2-9n16.q1k chr09 39 866 5888 6711 F 828 97.83 1190 reject_low 7 ALIGNMENT 74 YS2-9n16.q1k chr08 866 777 557281 557370 C 90 94.44 1190 reject_low 39 ALIGNMENT 0 YS2-9n16.p1k chr16 130 62 6232 6231 C 69 0.00 1170 reject_low 16 ALIGNMENT 596 YS2-9n16.q1k chr08 39 718 4281 4951 F 680 97.21 1190 reject_low 27 ALIGNMENT 751 YS2-9n16.q1k chr10 39 866 5871 6694 F 828 97.83 1190 reject_low 8 ALIGNMENT 36 YS2-9n16.q1k chr07 970 923 1083976 1084022 C 48 93.75 1190 reject_low 42 ALIGNMENT 0 YS2-9n16.q1k chr12 776 62 1065530 1065529 C 715 0.00 1190 reject_low 44 ALIGNMENT 733 YS2-9n16.p1k chr12 131 959 1071946 1072764 F 829 97.10 1170 reject_low 25 ALIGNMENT 75 YS2-9n16.p1k chr08 131 220 557281 557370 F 90 95.56 1170|1,0 reject_low 30,35 ALIGNMENT 0 YS2-9n16.p1k chr12 130 62 10902 10901 C 69 0.00 1170 accept_tel 0 ALIGNMENT 0 YS2-9n16.p1k chr02 247 221 5462 5461 C 27 0.00 1170 reject_low 32 ALIGNMENT 0 YS2-9n16.p1k chr05 130 62 6227 6226 C 69 0.00 1170 reject_low 26,33 ALIGNMENT 75 YS2-9n16.p1k chr02 220 131 5462 5551 C 90 95.56 1170 reject_low 20,32 ALIGNMENT 74 YS2-9n16.q1k chr12 866 777 1065440 1065529 C 90 94.44 1190 reject_low 44 ALIGNMENT 746 YS2-9n16.q1k chr12 866 39 1071946 1072764 C 828 97.83 1190 reject_low 2 ALIGNMENT 26 YS2-9n16.p1k chr08 100 45 5087 5144 C 56 83.93 1170 reject_low 27,34 ALIGNMENT 75 YS2-9n16.p1k chr12 131 220 1065440 1065529 F 90 95.56 1170 reject_low 2,31 ALIGNMENT 0 YS2-9n16.p1k chr02 130 62 5552 5551 C 69 0.00 1170 reject_low 20,32 ALIGNMENT 0 YS2-9n16.p1k chr05 62 130 570610 570609 F 69 0.00 1170 reject_low 24 ALIGNMENT 741 YS2-9n16.q1k chr13 39 866 4425 5242 F 828 97.71 1190 reject_low 3 ALIGNMENT 582 YS2-9n16.p1k chr08 959 279 4281 4951 C 681 96.33 1170 reject_low 34 ALIGNMENT 733 YS2-9n16.p1k chr04 131 959 1525745 1526563 F 829 97.10 1170 reject_low 29 ALIGNMENT 0 YS2-9n16.q1k chr02 750 826 5461 5460 F 77 0.00 1190 reject_low 20 ALIGNMENT 78 YS2-9n16.p1k chr05 220 131 6137 6226 C 90 96.67 1170 reject_low 26,33 ALIGNMENT 741 YS2-9n16.q1k chr12 39 866 4549 5366 F 828 97.71 1190 accept_tel 0 ALIGNMENT 0 YS2-9n16.p1k chr10 130 62 6695 6694 C 69 0.00 1170 reject_low 14 ALIGNMENT 670 YS2-9n16.q1k chr02 39 749 4750 5461 F 711 98.87 1190 reject_low 20 ALIGNMENT 0 YS2-9n16.p1k chr04 107 130 1525031 1525744 F 24 0.00 1170 reject_low 29 ALIGNMENT 50 YS2-9n16.p1k chr07 28 106 1083976 1084056 F 79 89.87 1170 reject_low 5,28 ALIGNMENT 0 YS2-9n16.p1k chr14 130 62 6323 6322 C 69 0.00 1170 reject_low 15 ALIGNMENT 644 YS2-9n16.p1k chr05 131 959 570610 571409 F 829 94.57 1170 reject_low 24 ALIGNMENT 77 YS2-9n16.q1k chr05 777 866 6137 6226 F 90 95.56 1190 reject_low 40 ALIGNMENT 0 YS2-9n16.p1k chr12 112 130 1064706 1071945 F 19 0.00 1170 reject_low 25 ALIGNMENT 97 YS2-9n16.p1k chr04 132 28 462 566 C 105 100.00 1170 reject_low 38 ALIGNMENT 0 YS2-9n16.q1k chr08 928 62 556486 556485 C 867 0.00 1190 reject_low 43 ALIGNMENT 0 YS2-9n16.p1k chr02 839 221 5463 5462 C 619 0.00 1170 reject_low 20 ALIGNMENT 0 YS2-9n16.p1k chr09 130 62 6712 6711 C 69 0.00 1170 reject_low 13 ALIGNMENT 746 YS2-9n16.q1k chr04 866 39 1525745 1526563 C 828 97.83 1190 reject_low 6 ALIGNMENT 665 YS2-9n16.q1k chr08 749 39 557371 558081 C 711 98.73 1190 reject_low 30 ALIGNMENT 735 YS2-9n16.p1k chr07 131 959 1084646 1085469 F 829 96.98 1170 reject_low 28 ALIGNMENT 727 YS2-9n16.p1k chr13 959 131 4425 5242 C 829 97.10 1170|0,1 reject_low 18 ALIGNMENT 839 YS2-9n16.p1k chr16 28 959 942701 943627 F 932 97.42 1170 reject_low 4 ALIGNMENT 0 YS2-9n16.p1k chr13 839 133 5903 5902 C 707 0.00 1170 reject_low 3 ALIGNMENT 97 YS2-9n16.p1k chr13 132 28 5902 6006 C 105 100.00 1170|1,0 reject_low 3,18 ALIGNMENT 0 YS2-9n16.p1k chr04 839 133 463 462 C 707 0.00 1170 reject_low 38 ALIGNMENT 0 YS2-9n16.p1k chr04 107 839 1525030 1525029 F 733 0.00 1170 reject_low 6 ALIGNMENT 0 YS2-9n16.p1k chr06 130 62 4390 4389 C 69 0.00 1170 reject_low 23 ALIGNMENT 0 YS2-9n16.p1k chr08 133 839 556548 556547 F 707 0.00 1170 reject_low 39 ALIGNMENT 652 YS2-9n16.p1k chr06 959 131 3587 4389 C 829 94.69 1170 reject_low 23 ALIGNMENT 738 YS2-9n16.p1k chr09 959 131 5888 6711 C 829 97.23 1170 reject_low 13 ALIGNMENT 666 YS2-9n16.q1k chr06 39 866 3587 4389 F 828 95.29 1190 reject_low 21 ALIGNMENT 735 YS2-9n16.p1k chr14 959 131 5499 6322 C 829 97.10 1170 reject_low 15 ALIGNMENT 29 YS2-9n16.q1k chr08 970 929 556444 556485 C 42 92.86 1190 reject_low 43 ALIGNMENT 0 YS2-9n16.p1k chr05 839 221 6138 6137 C 619 0.00 1170 reject_low 26 ALIGNMENT 541 YS2-9n16.q1k chr12 749 39 1065530 1066212 C 711 94.37 1190 reject_low 31 ALIGNMENT 833 YS2-9n16.q1k chr16 970 39 942701 943627 C 932 97.42 1190 reject_low 1 ALIGNMENT 658 YS2-9n16.q1k chr05 866 39 570610 571409 C 828 95.17 1190 reject_low 22 ALIGNMENT 0 YS2-9n16.p1k chr07 107 839 1084056 1084055 F 733 0.00 1170 reject_low 5 ALIGNMENT 0 YS2-9n16.q1k chr12 885 867 1064706 1065439 C 19 0.00 1190 reject_low 44 ALIGNMENT 0 YS2-9n16.p1k chr12 221 839 1065529 1065528 F 619 0.00 1170 reject_low 31 ALIGNMENT 748 YS2-9n16.q1k chr14 39 866 5499 6322 F 828 97.71 1190 reject_low 9 ALIGNMENT 0 YS2-9n16.p1k chr13 131 132 5242 5902 C 0 0.00 1170 reject_low 18 ALIGNMENT 0 YS2-9n16.p1k chr08 221 247 557371 557370 F 27 0.00 1170 reject_low 35 ALIGNMENT 0 YS2-9n16.p1k chr15 62 130 1084910 1084909 F 69 0.00 1170 reject_low 17 ALIGNMENT 74 YS2-9n16.q1k chr02 777 866 5462 5551 F 90 94.44 1190 reject_low 41 ALIGNMENT 0 YS2-9n16.q1k chr02 62 776 5462 5461 F 715 0.00 1190 reject_low 41 ALIGNMENT 79 YS2-9n16.q1k chr04 865 970 462 566 F 106 94.34 1190 reject_low 36 ALIGNMENT 0 YS2-9n16.p1k chr05 247 221 6137 6136 C 27 0.00 1170 reject_low 33 ALIGNMENT 735 YS2-9n16.p1k chr16 959 131 5408 6231 C 829 97.10 1170 reject_low 16 ALIGNMENT 738 YS2-9n16.p1k chr10 959 131 5871 6694 C 829 97.23 1170 reject_low 14 ALIGNMENT 0 YS2-9n16.q1k chr08 826 750 557372 557371 C 77 0.00 1190 reject_low 30 ALIGNMENT 79 YS2-9n16.q1k chr13 865 970 5902 6006 F 106 94.34 1190 reject_low 37 ALIGNMENT 727 YS2-9n16.p1k chr12 959 131 4549 5366 C 829 97.10 1170 reject_low 19 ALIGNMENT 0 YS2-9n16.q1k chr08 776 62 557371 557370 C 715 0.00 1190 reject_low 39 ALIGNMENT 36 YS2-9n16.p1k chr08 28 132 556444 556548 F 105 82.86 1170|0,1 reject_low 30,35,39 ALIGNMENT 547 YS2-9n16.q1k chr05 39 749 5454 6136 F 711 94.66 1190 reject_low 26 ALIGNMENT 0 YS2-9n16.p1k chr12 221 247 1065530 1065529 F 27 0.00 1170 reject_low 2 ALIGNMENT 61 YS2-9n16.p1k chr12 28 111 1064620 1064705 F 84 92.86 1170 reject_low 2,25,31 ALIGNMENT 651 YS2-9n16.p1k chr08 248 959 557371 558081 F 712 97.75 1170 reject_low 35 ALIGNMENT 42 YS2-9n16.q1k chr12 970 886 1064620 1064705 C 85 85.88 1190 reject_low 44 ALIGNMENT 0 YS2-9n16.p1k chr12 112 130 1064706 1065439 F 19 0.00 1170 reject_low 2,31 ALIGNMENT 733 YS2-9n16.p1k chr15 131 959 1084910 1085728 F 829 97.10 1170 reject_low 17 ALIGNMENT 0 YS2-9n16.p1k chr08 839 101 5088 5087 C 739 0.00 1170 reject_low 27 ALIGNMENT 0 YS2-9n16.q1k chr05 750 826 6136 6135 F 77 0.00 1190 reject_low 26 ALIGNMENT 0 YS2-9n16.p1k chr08 132 131 556548 557281 F 0 0.00 1170 reject_low 30,35 ALIGNMENT 0 YS2-9n16.p1k chr07 107 130 1084057 1084645 F 24 0.00 1170 reject_low 28 ALIGNMENT 0 YS2-9n16.q1k chr04 62 864 462 461 F 803 0.00 1190 reject_low 36 ALIGNMENT 748 YS2-9n16.q1k chr16 39 866 5408 6231 F 828 97.71 1190 reject_low 10 ALIGNMENT 0 YS2-9n16.q1k chr07 922 62 1084023 1084022 C 861 0.00 1190 reject_low 42 ALIGNMENT 0 YS2-9n16.p1k chr08 278 101 4952 5086 C 178 0.00 1170 reject_low 34 ALIGNMENT 0 YS2-9n16.q1k chr12 826 750 1065531 1065530 C 77 0.00 1190 reject_low 31 ALIGNMENT 727 YS2-9n16.p1k chr12 959 131 10084 10901 C 829 97.10 1170 accept_tel 0 ALIGNMENT 976 YS2-9n17.q1k chr08 1141 39 539943 541041 C 1103 96.83 1164 ambiguous_tel 1 ALIGNMENT 973 YS2-9n17.q1k chr01 1141 39 219332 220430 C 1103 96.74 1164 ambiguous_tel 2 ALIGNMENT 170 YS2-9n17.p1k chr06 1162 841 32192 32513 C 322 84.47 1162|0,6 accept 0 ALIGNMENT 0 YS2-9n17.p1k chr06 846 847 32508 32753 C 0 0.00 1162 accept 0 ALIGNMENT 730 YS2-9n17.p1k chr06 851 33 32749 33568 C 819 97.44 1162|5,0 accept 0 ALIGNMENT 1041 YS2-9n18.p1k chr13 29 1158 675653 676784 F 1130 97.79 1162 accept 0 ALIGNMENT 930 YS2-9n18.q1k chr13 1107 40 676779 677841 C 1068 97.75 1185 accept 0 ALIGNMENT 939 YS2-9n21.q1k chr15 31 1050 995057 996072 F 1020 98.33 1070 accept 0 ALIGNMENT 931 YS2-9n21.p1k chr15 1081 33 998630 999681 C 1049 96.95 1082 accept 0 ALIGNMENT 0 YS2-9n22.p1k chr11 649 631 252981 252980 C 19 0.00 649 accept_chi 1 ALIGNMENT 560 YS2-9n22.p1k chr11 630 41 252980 253569 C 590 99.49 649 accept_chi 1 ALIGNMENT 561 YS2-9n22.q1k chr11 32 622 252980 253570 F 591 99.49 623 accept_chi 0 ALIGNMENT 221 YS2-9n23.q1k vc_3 1 306 2689 2994 F 306 90.85 821 reject_vc 6 ALIGNMENT 0 YS2-9n23.p1k chr12 228 210 500199 500198 C 19 0.00 228 accept 0 ALIGNMENT 239 YS2-9n23.q1k vc_7 398 1 2178 2569 C 398 87.69 821 reject_vc 2 ALIGNMENT 221 YS2-9n23.q1k vc_2 1 306 2322 2627 F 306 90.85 821 reject_vc 5 ALIGNMENT 234 YS2-9n23.q1k vc_4 400 1 5259 5654 C 400 87.25 821 reject_vc 3 ALIGNMENT 221 YS2-9n23.q1k vc_1 1 306 2689 2994 F 306 90.85 821 reject_vc 4 ALIGNMENT 171 YS2-9n23.q1k vc_7 302 53 4923 5172 C 250 89.60 821 reject_vc 7 ALIGNMENT 242 YS2-9n23.q1k vc_5 1 441 2556 2985 F 441 86.85 821 reject_vc 1 ALIGNMENT 108 YS2-9n23.p1k chr12 209 59 500198 500347 C 151 92.72 228 accept 0 ALIGNMENT 934 YS2-9n24.q1k chr12 39 1104 569444 570502 F 1066 97.28 1104 accept 0 ALIGNMENT 901 YS2-9n24.p1k chr12 1069 39 574669 575705 C 1031 96.41 1075 accept 0 ALIGNMENT 1040 YS2-9o01.p1k chr14 1132 35 476641 477740 C 1098 98.72 1132 accept 0 ALIGNMENT 1003 YS2-9o01.q1k chr14 39 1238 473237 474441 F 1200 96.17 1259 accept 0 ALIGNMENT 219 YS2-9o02.p1k chr14 30 270 548736 548978 F 241 98.76 289 accept_chi 1 ALIGNMENT 0 YS2-9o02.q1k vc_5 277 62 5068 5067 C 216 0.00 320 reject_low 5 ALIGNMENT 0 YS2-9o02.q1k vc_3 279 62 2513 2512 C 218 0.00 320 reject_low 3 ALIGNMENT 0 YS2-9o02.q1k vc_4 62 279 5831 5830 F 218 0.00 320 reject_low 4 ALIGNMENT 0 YS2-9o02.q1k chr14 320 280 548736 548735 C 41 0.00 320 accept_chi 0 ALIGNMENT 37 YS2-9o02.q1k vc_5 317 278 1 40 C 40 97.50 320 reject_low 7 ALIGNMENT 230 YS2-9o02.q1k chr14 279 36 548735 548978 C 244 99.59 320 accept_chi 0 ALIGNMENT 40 YS2-9o02.q1k vc_5 320 278 5025 5067 C 43 97.67 320 reject_low 5 ALIGNMENT 41 YS2-9o02.q1k vc_4 280 320 5831 5871 F 41 100.00 320 reject_low 4 ALIGNMENT 38 YS2-9o02.q1k vc_7 283 320 13525 13562 F 38 100.00 320 reject_low 6 ALIGNMENT 0 YS2-9o02.q1k vc_5 277 62 41 40 C 216 0.00 320 reject_low 7 ALIGNMENT 41 YS2-9o02.q1k vc_3 320 280 2472 2512 C 41 100.00 320 reject_low 3 ALIGNMENT 0 YS2-9o02.q1k vc_1 279 62 2513 2512 C 218 0.00 320 reject_low 2 ALIGNMENT 41 YS2-9o02.q1k vc_1 320 280 2472 2512 C 41 100.00 320 reject_low 2 ALIGNMENT 0 YS2-9o02.q1k vc_7 62 282 13525 13524 F 221 0.00 320 reject_low 6 ALIGNMENT 0 YS2-9o02.p1k chr14 271 289 548978 548977 F 19 0.00 289 accept_chi 1 ALIGNMENT 849 YS2-9o03.p1k chr05 38 1049 394125 395157 F 1012 94.76 1105 accept 0 ALIGNMENT 997 YS2-9o03.q1k chr05 1174 30 397298 398457 C 1145 96.86 1218 accept 0 ALIGNMENT 168 YS2-9o03.q1k chr02 837 1169 59817 60163 F 333 84.98 1218 reject_low 1 ALIGNMENT 0 YS2-9o03.q1k chr02 62 836 59817 59816 F 775 0.00 1218 reject_low 1 ALIGNMENT 1028 YS2-9o07.q1k chr07 41 1217 460563 461730 F 1177 97.03 1245 accept 0 ALIGNMENT 952 YS2-9o07.p1k chr07 1173 34 460936 462096 C 1140 95.44 1178 accept 0 ALIGNMENT 885 YS2-9o08.q1k chr13 1218 40 137152 138303 C 1179 94.40 1220 accept 0 ALIGNMENT 903 YS2-9o08.p1k chr13 35 1145 133275 134400 F 1111 94.06 1178 accept 0 ALIGNMENT 41 YS2-9o09.q1k vc_2 455 415 2105 2145 C 41 100.00 455 reject_low 3 ALIGNMENT 41 YS2-9o09.q1k vc_3 455 415 2472 2512 C 41 100.00 455 reject_low 4 ALIGNMENT 39 YS2-9o09.q1k vc_5 455 417 5025 5063 C 39 100.00 455 reject_low 6 ALIGNMENT 0 YS2-9o09.q1k vc_3 414 62 2513 2512 C 353 0.00 455 reject_low 4 ALIGNMENT 0 YS2-9o09.q1k chr04 415 455 809319 809318 F 41 0.00 455 accept_chi 1 ALIGNMENT 0 YS2-9o09.q1k vc_7 62 417 13525 13524 F 356 0.00 455 reject_low 7 ALIGNMENT 0 YS2-9o09.q1k vc_4 62 414 5831 5830 F 353 0.00 455 reject_low 5 ALIGNMENT 355 YS2-9o09.q1k chr04 40 414 808944 809319 F 375 99.20 455 accept_chi 1 ALIGNMENT 0 YS2-9o09.p1k chr04 428 410 808945 808944 C 19 0.00 428 accept_chi 0 ALIGNMENT 41 YS2-9o09.q1k vc_4 415 455 5831 5871 F 41 100.00 455 reject_low 5 ALIGNMENT 0 YS2-9o09.q1k vc_5 416 62 37 36 C 355 0.00 455 reject_low 8 ALIGNMENT 0 YS2-9o09.q1k vc_2 414 62 2146 2145 C 353 0.00 455 reject_low 3 ALIGNMENT 38 YS2-9o09.q1k vc_7 418 455 13525 13562 F 38 100.00 455 reject_low 7 ALIGNMENT 0 YS2-9o09.q1k vc_5 416 62 5064 5063 C 355 0.00 455 reject_low 6 ALIGNMENT 357 YS2-9o09.p1k chr04 409 37 808944 809316 C 373 99.46 428 accept_chi 0 ALIGNMENT 0 YS2-9o09.q1k vc_1 414 62 2513 2512 C 353 0.00 455 reject_low 2 ALIGNMENT 41 YS2-9o09.q1k vc_1 455 415 2472 2512 C 41 100.00 455 reject_low 2 ALIGNMENT 36 YS2-9o09.q1k vc_5 452 417 1 36 C 36 100.00 455 reject_low 8 ALIGNMENT 950 YS2-9o10.p1k chr12 39 1144 22583 23692 F 1106 96.20 1144 accept 0 ALIGNMENT 930 YS2-9o10.q1k chr12 1127 45 25607 26676 C 1083 96.40 1152 accept 0 ALIGNMENT 933 YS2-9o12.q1k chr07 28 1185 599474 600611 F 1158 95.16 1217 accept 0 ALIGNMENT 713 YS2-9o12.p1k chr07 939 35 604006 604927 C 905 93.81 1113 accept 0 ALIGNMENT 154 YS2-9o14.q1k chr11 31 231 517220 517420 F 201 95.02 1151 reject_low 17 ALIGNMENT 38 YS2-9o14.q1k chr04 186 80 981216 981322 C 107 82.24 1151 accept 0 ALIGNMENT 140 YS2-9o14.q1k chr03 27 239 142867 143079 F 213 91.08 1151 reject_low 2 ALIGNMENT 41 YS2-9o14.q1k chr06 231 80 137914 138065 C 152 78.95 1151 reject_low 28 ALIGNMENT 0 YS2-9o14.q1k chr06 849 232 143542 143541 C 618 0.00 1151 reject_low 29 ALIGNMENT 0 YS2-9o14.q1k chr16 849 232 560485 560484 C 618 0.00 1151 reject_low 19 ALIGNMENT 154 YS2-9o14.q1k chr02 231 31 226630 226830 C 201 95.02 1151 reject_low 13 ALIGNMENT 0 YS2-9o14.q1k chr11 232 849 517420 517419 F 618 0.00 1151 reject_low 17 ALIGNMENT 41 YS2-9o14.q1k chr06 231 80 143541 143692 C 152 78.95 1151 reject_low 29 ALIGNMENT 154 YS2-9o14.q1k chr07 31 231 817523 817723 F 201 95.02 1151 reject_low 15 ALIGNMENT 0 YS2-9o14.q1k chr08 325 230 133101 133679 C 96 0.00 1151 reject_low 23 ALIGNMENT 154 YS2-9o14.q1k chr16 231 31 560484 560684 C 201 95.02 1151 reject_low 19 ALIGNMENT 158 YS2-9o14.q1k chr08 31 238 549431 549638 F 208 94.71 1151 reject_low 3 ALIGNMENT 0 YS2-9o14.q1k chr04 79 62 981323 981322 C 18 0.00 1151 accept 0 ALIGNMENT 157 YS2-9o14.q1k chr13 231 31 184176 184376 C 201 95.52 1151 reject_low 10 ALIGNMENT 0 YS2-9o14.q1k chr06 79 62 143693 143692 C 18 0.00 1151 reject_low 29 ALIGNMENT 0 YS2-9o14.q1k chr02 849 232 226631 226630 C 618 0.00 1151 reject_low 13 ALIGNMENT 0 YS2-9o14.q1k chr14 232 849 102517 102516 F 618 0.00 1151 reject_low 12 ALIGNMENT 155 YS2-9o14.q1k chr07 238 31 535214 535421 C 208 94.23 1151 reject_low 5 ALIGNMENT 145 YS2-9o14.q1k chr03 31 231 124256 124456 F 201 93.53 1151 reject_low 20 ALIGNMENT 0 YS2-9o14.q1k chr11 232 849 458108 458107 F 618 0.00 1151 reject_low 16 ALIGNMENT 154 YS2-9o14.q1k chr13 31 231 357129 357329 F 201 95.02 1151 reject_low 18 ALIGNMENT 83 YS2-9o14.q1k chr01 413 326 182510 182597 C 88 98.86 1151 reject_low 22 ALIGNMENT 0 YS2-9o14.q1k chr08 849 408 133020 133019 C 442 0.00 1151 reject_low 23 ALIGNMENT 127 YS2-9o14.q1k chr08 229 31 133680 133877 C 199 90.95 1151 reject_low 23 ALIGNMENT 0 YS2-9o14.q1k chr14 232 849 96935 96934 F 618 0.00 1151 reject_low 11 ALIGNMENT 0 YS2-9o14.q1k chr02 849 239 259576 259575 C 611 0.00 1151 reject_low 7 ALIGNMENT 0 YS2-9o14.q1k chr01 325 232 182598 183141 C 94 0.00 1151 reject_low 22 ALIGNMENT 975 YS2-9o14.p1k chr04 39 1144 976646 977754 F 1106 96.29 1185 accept 0 ALIGNMENT 0 YS2-9o14.q1k chr07 849 239 401962 401961 C 611 0.00 1151 reject_low 8 ALIGNMENT 0 YS2-9o14.q1k chr02 414 849 227165 227164 F 436 0.00 1151 reject_low 1 ALIGNMENT 0 YS2-9o14.q1k chr04 849 232 1175315 1175314 C 618 0.00 1151 reject_low 21 ALIGNMENT 155 YS2-9o14.q1k chr07 31 238 823105 823312 F 208 94.23 1151 reject_low 6 ALIGNMENT 0 YS2-9o14.q1k chr06 849 236 137658 137657 C 614 0.00 1151 reject_low 26 ALIGNMENT 0 YS2-9o14.q1k chr07 239 849 823312 823311 F 611 0.00 1151 reject_low 6 ALIGNMENT 0 YS2-9o14.q1k chr03 240 849 143079 143078 F 610 0.00 1151 reject_low 2 ALIGNMENT 145 YS2-9o14.q1k chr04 231 31 1175314 1175514 C 201 93.53 1151 reject_low 21 ALIGNMENT 0 YS2-9o14.q1k chr03 232 849 124456 124455 F 618 0.00 1151 reject_low 20 ALIGNMENT 99 YS2-9o14.q1k chr06 235 67 137657 137820 C 169 89.94 1151 reject_low 26 ALIGNMENT 0 YS2-9o14.q1k chr08 239 849 549638 549637 F 611 0.00 1151 reject_low 3 ALIGNMENT 157 YS2-9o14.q1k chr14 31 231 96735 96935 F 201 95.52 1151 reject_low 11 ALIGNMENT 154 YS2-9o14.q1k chr02 231 31 265167 265367 C 201 95.02 1151 reject_low 14 ALIGNMENT 0 YS2-9o14.q1k chr16 232 849 850956 850955 F 618 0.00 1151 reject_low 24 ALIGNMENT 81 YS2-9o14.q1k chr08 407 326 133019 133100 C 82 100.00 1151 reject_low 23 ALIGNMENT 0 YS2-9o14.q1k chr06 79 62 138066 138065 C 18 0.00 1151 reject_low 28 ALIGNMENT 0 YS2-9o14.q1k chr13 232 849 357329 357328 F 618 0.00 1151 reject_low 18 ALIGNMENT 0 YS2-9o14.q1k chr07 849 239 535215 535214 C 611 0.00 1151 reject_low 5 ALIGNMENT 0 YS2-9o14.q1k chr02 849 232 265168 265167 C 618 0.00 1151 reject_low 14 ALIGNMENT 0 YS2-9o14.q1k chr02 62 313 227066 227065 F 252 0.00 1151 reject_low 1 ALIGNMENT 128 YS2-9o14.q1k chr16 31 231 856338 856544 F 201 91.04 1151 reject_low 25 ALIGNMENT 0 YS2-9o14.q1k chr01 849 414 182511 182510 C 436 0.00 1151 reject_low 22 ALIGNMENT 694 YS2-9o14.q1k chr04 1138 211 980238 981164 C 928 92.89 1151 accept 0 ALIGNMENT 0 YS2-9o14.q1k chr06 849 232 137915 137914 C 618 0.00 1151 reject_low 28 ALIGNMENT 127 YS2-9o14.q1k chr01 231 31 183142 183342 C 201 90.55 1151 reject_low 22 ALIGNMENT 0 YS2-9o14.q1k chr08 232 849 543935 543934 F 618 0.00 1151 reject_low 9 ALIGNMENT 152 YS2-9o14.q1k chr07 238 31 401961 402168 C 208 93.75 1151 reject_low 8 ALIGNMENT 157 YS2-9o14.q1k chr08 31 231 543735 543935 F 201 95.52 1151 reject_low 9 ALIGNMENT 0 YS2-9o14.q1k chr04 210 187 981165 981215 C 24 0.00 1151 accept 0 ALIGNMENT 0 YS2-9o14.q1k chr06 849 186 158409 158408 C 664 0.00 1151 reject_low 27 ALIGNMENT 0 YS2-9o14.q1k chr16 232 849 856544 856543 F 618 0.00 1151 reject_low 25 ALIGNMENT 0 YS2-9o14.q1k chr07 232 849 817723 817722 F 618 0.00 1151 reject_low 15 ALIGNMENT 52 YS2-9o14.q1k chr06 185 34 158408 158557 C 152 81.58 1151 reject_low 27 ALIGNMENT 128 YS2-9o14.q1k chr16 31 231 850750 850956 F 201 91.04 1151 reject_low 24 ALIGNMENT 154 YS2-9o14.q1k chr11 31 231 457908 458108 F 201 95.02 1151 reject_low 16 ALIGNMENT 152 YS2-9o14.q1k chr02 238 31 259575 259782 C 208 93.75 1151 reject_low 7 ALIGNMENT 155 YS2-9o14.q1k chr02 238 31 221039 221246 C 208 94.23 1151 reject_low 4 ALIGNMENT 0 YS2-9o14.q1k chr02 849 239 221040 221039 C 611 0.00 1151 reject_low 4 ALIGNMENT 157 YS2-9o14.q1k chr14 31 231 102317 102517 F 201 95.52 1151 reject_low 12 ALIGNMENT 90 YS2-9o14.q1k chr02 314 413 227066 227165 F 100 97.00 1151 reject_low 1 ALIGNMENT 0 YS2-9o14.q1k chr13 849 232 184177 184176 C 618 0.00 1151 reject_low 10 ALIGNMENT 0 YS2-9o16.q1k chr15 351 311 224429 224428 C 41 0.00 351 manual 3 ALIGNMENT 36 YS2-9o16.q1k vc_5 348 313 1 36 C 36 100.00 351 reject_low 10 ALIGNMENT 41 YS2-9o16.q1k vc_2 351 311 2105 2145 C 41 100.00 351 reject_low 5 ALIGNMENT 41 YS2-9o16.q1k vc_4 311 351 5831 5871 F 41 100.00 351 reject_low 7 ALIGNMENT 0 YS2-9o16.q1k vc_3 310 62 2513 2512 C 249 0.00 351 reject_low 6 ALIGNMENT 0 YS2-9o16.q1k chr16 351 311 53509 53508 C 41 0.00 351 manual 1 ALIGNMENT 39 YS2-9o16.q1k vc_5 351 313 5025 5063 C 39 100.00 351 reject_low 8 ALIGNMENT 38 YS2-9o16.q1k vc_7 314 351 13525 13562 F 38 100.00 351 reject_low 9 ALIGNMENT 0 YS2-9o16.q1k vc_1 310 62 2513 2512 C 249 0.00 351 reject_low 4 ALIGNMENT 0 YS2-9o16.q1k vc_5 312 62 5064 5063 C 251 0.00 351 reject_low 8 ALIGNMENT 41 YS2-9o16.q1k vc_1 351 311 2472 2512 C 41 100.00 351 reject_low 4 ALIGNMENT 0 YS2-9o16.p1k chr15 284 319 224681 224680 F 36 0.00 319 manual 2 ALIGNMENT 0 YS2-9o16.q1k vc_2 310 62 2146 2145 C 249 0.00 351 reject_low 5 ALIGNMENT 0 YS2-9o16.p1k chr16 302 319 53779 53778 F 18 0.00 319 manual 0 ALIGNMENT 0 YS2-9o16.q1k vc_5 312 62 37 36 C 251 0.00 351 reject_low 10 ALIGNMENT 0 YS2-9o16.q1k vc_4 62 310 5831 5830 F 249 0.00 351 reject_low 7 ALIGNMENT 41 YS2-9o16.q1k vc_3 351 311 2472 2512 C 41 100.00 351 reject_low 6 ALIGNMENT 271 YS2-9o16.p1k chr16 30 301 53508 53779 F 272 100.00 319 manual 0 ALIGNMENT 103 YS2-9o16.p1k chr15 30 283 224428 224681 F 254 80.31 319 manual 2 ALIGNMENT 267 YS2-9o16.q1k chr16 310 38 53508 53779 C 273 99.63 351 manual 1 ALIGNMENT 0 YS2-9o16.q1k vc_7 62 313 13525 13524 F 252 0.00 351 reject_low 9 ALIGNMENT 99 YS2-9o16.q1k chr15 310 56 224428 224681 C 255 80.00 351 manual 3 ALIGNMENT 20 YS2-9o17.q1k chr04 190 160 604243 604273 C 31 90.32 1232 reject_low 2 ALIGNMENT 0 YS2-9o17.q1k chr08 191 915 365397 365396 F 725 0.00 1232 reject_low 5 ALIGNMENT 0 YS2-9o17.q1k chr15 62 149 427929 427928 F 88 0.00 1232 reject_low 1 ALIGNMENT 0 YS2-9o17.q1k chr04 915 191 604244 604243 C 725 0.00 1232 reject_low 2 ALIGNMENT 0 YS2-9o17.q1k chr15 62 163 428003 428002 F 102 0.00 1232 reject_low 3 ALIGNMENT 20 YS2-9o17.q1k chr07 190 167 394465 394488 C 24 95.83 1232 reject_low 6 ALIGNMENT 0 YS2-9o17.q1k chr07 166 62 394489 394488 C 105 0.00 1232 reject_low 6 ALIGNMENT 0 YS2-9o17.q1k chr08 62 163 365371 365370 F 102 0.00 1232 reject_low 5 ALIGNMENT 0 YS2-9o17.q1k chr13 163 62 354220 354219 C 102 0.00 1232 reject_low 4 ALIGNMENT 1069 YS2-9o17.q1k chr01 1229 40 131257 132451 C 1190 96.97 1232 accept 0 ALIGNMENT 0 YS2-9o17.q1k chr15 191 915 428029 428028 F 725 0.00 1232 reject_low 3 ALIGNMENT 23 YS2-9o17.q1k chr15 164 190 428003 428029 F 27 96.30 1232 reject_low 3 ALIGNMENT 0 YS2-9o17.q1k chr04 159 62 604274 604273 C 98 0.00 1232 reject_low 2 ALIGNMENT 20 YS2-9o17.q1k chr08 164 190 365371 365397 F 27 92.59 1232 reject_low 5 ALIGNMENT 25 YS2-9o17.q1k chr15 150 189 427929 427968 F 40 90.00 1232 reject_low 1 ALIGNMENT 0 YS2-9o17.q1k chr07 915 191 394466 394465 C 725 0.00 1232 reject_low 6 ALIGNMENT 0 YS2-9o17.q1k chr15 190 915 427968 427967 F 726 0.00 1232 reject_low 1 ALIGNMENT 0 YS2-9o17.q1k chr13 915 192 354193 354192 C 724 0.00 1232 reject_low 4 ALIGNMENT 21 YS2-9o17.q1k chr13 191 164 354192 354219 C 28 92.86 1232 reject_low 4 ALIGNMENT 876 YS2-9o17.p1k chr01 45 1090 128251 129300 F 1046 94.74 1090 accept 0 ALIGNMENT 100 YS2-9o18.q1k chr15 892 679 648805 649014 C 214 83.64 1174 reject_low 1 ALIGNMENT 0 YS2-9o18.q1k chr15 678 62 649015 649014 C 617 0.00 1174 reject_low 1 ALIGNMENT 893 YS2-9o18.p1k chr12 1064 38 677689 678699 C 1027 97.18 1145 accept 0 ALIGNMENT 774 YS2-9o18.q1k chr12 31 1003 672477 673433 F 973 95.58 1174 accept 0 ALIGNMENT 0 YS2-9o19.q1k vc_1 357 62 2513 2512 C 296 0.00 398 reject_low 2 ALIGNMENT 0 YS2-9o19.q1k vc_5 359 62 37 36 C 298 0.00 398 reject_low 8 ALIGNMENT 0 YS2-9o19.q1k vc_3 357 62 2513 2512 C 296 0.00 398 reject_low 4 ALIGNMENT 41 YS2-9o19.q1k vc_2 398 358 2105 2145 C 41 100.00 398 reject_low 3 ALIGNMENT 0 YS2-9o19.p1k chr14 367 349 636585 636584 C 19 0.00 367 accept_chi 0 ALIGNMENT 0 YS2-9o19.q1k vc_5 359 62 5064 5063 C 298 0.00 398 reject_low 6 ALIGNMENT 39 YS2-9o19.q1k vc_5 398 360 5025 5063 C 39 100.00 398 reject_low 6 ALIGNMENT 307 YS2-9o19.p1k chr14 348 31 636584 636901 C 318 99.69 367 accept_chi 0 ALIGNMENT 0 YS2-9o19.q1k chr14 363 398 636906 636905 F 36 0.00 398 accept_chi 1 ALIGNMENT 41 YS2-9o19.q1k vc_3 398 358 2472 2512 C 41 100.00 398 reject_low 4 ALIGNMENT 0 YS2-9o19.q1k vc_2 357 62 2146 2145 C 296 0.00 398 reject_low 3 ALIGNMENT 38 YS2-9o19.q1k vc_7 361 398 13525 13562 F 38 100.00 398 reject_low 7 ALIGNMENT 305 YS2-9o19.q1k chr14 41 362 636584 636906 F 322 99.07 398 accept_chi 1 ALIGNMENT 41 YS2-9o19.q1k vc_4 358 398 5831 5871 F 41 100.00 398 reject_low 5 ALIGNMENT 41 YS2-9o19.q1k vc_1 398 358 2472 2512 C 41 100.00 398 reject_low 2 ALIGNMENT 36 YS2-9o19.q1k vc_5 395 360 1 36 C 36 100.00 398 reject_low 8 ALIGNMENT 0 YS2-9o19.q1k vc_4 62 357 5831 5830 F 296 0.00 398 reject_low 5 ALIGNMENT 0 YS2-9o19.q1k vc_7 62 360 13525 13524 F 299 0.00 398 reject_low 7 ALIGNMENT 96 YS2-9o20.q1k chr12 38 137 468830 468930 F 100 99.00 1147 reject_low 4 ALIGNMENT 253 YS2-9o20.p1k chr12 459 68 451419 451823 C 392 90.31 1156 reject_low 1 ALIGNMENT 0 YS2-9o20.q1k chr12 138 763 482162 482161 F 626 0.00 1147 reject_low 6 ALIGNMENT 96 YS2-9o20.q1k chr12 38 137 482062 482162 F 100 99.00 1147 reject_low 6 ALIGNMENT 714 YS2-9o20.q1k chr12 38 996 459693 460691 F 959 93.12 1147 accept 0 ALIGNMENT 0 YS2-9o20.q1k chr12 138 763 485814 485813 F 626 0.00 1147 reject_low 7 ALIGNMENT 0 YS2-9o20.q1k chr12 138 763 472582 472581 F 626 0.00 1147 reject_low 5 ALIGNMENT 0 YS2-9o20.q1k chr12 153 763 489481 489480 F 611 0.00 1147 reject_low 3 ALIGNMENT 647 YS2-9o20.p1k chr12 1155 68 459838 460960 C 1088 88.60 1156 accept 0 ALIGNMENT 96 YS2-9o20.q1k chr12 38 137 472482 472582 F 100 99.00 1147 reject_low 5 ALIGNMENT 0 YS2-9o20.q1k chr12 138 763 468930 468929 F 626 0.00 1147 reject_low 4 ALIGNMENT 95 YS2-9o20.q1k chr12 863 996 451419 451554 F 134 91.04 1147 reject_low 2 ALIGNMENT 0 YS2-9o20.p1k chr12 789 460 451420 451419 C 330 0.00 1156 reject_low 1 ALIGNMENT 0 YS2-9o20.q1k chr12 62 862 451419 451418 F 801 0.00 1147 reject_low 2 ALIGNMENT 105 YS2-9o20.q1k chr12 38 152 489366 489481 F 115 97.39 1147 reject_low 3 ALIGNMENT 96 YS2-9o20.q1k chr12 38 137 485714 485814 F 100 99.00 1147 reject_low 7 ALIGNMENT 1016 YS2-9o21.q1k chr10 38 1212 595429 596610 F 1175 96.34 1225 accept 0 ALIGNMENT 935 YS2-9o21.p1k chr10 1081 36 598710 599752 C 1046 97.04 1081 accept 0 ALIGNMENT 359 YS2-9o22.q1k chr02 596 222 35844 36218 C 375 100.00 1082 reject_low 7 ALIGNMENT 265 YS2-9o22.q1k chr15 222 512 703773 704063 F 291 98.28 1082|0,2 reject_low 43 ALIGNMENT 0 YS2-9o22.q1k chr16 221 62 443110 443109 C 160 0.00 1082 reject_low 14 ALIGNMENT 0 YS2-9o22.q1k chr15 595 795 710110 710109 F 201 0.00 1082 reject_low 43 ALIGNMENT 150 YS2-9o22.p1k chr05 178 369 249989 250185 F 192 93.23 1049 ambiguous_trans_ua 35 ALIGNMENT 0 YS2-9o22.q1k chr13 795 593 808537 808536 C 203 0.00 1082 reject_low 18 ALIGNMENT 0 YS2-9o22.q1k chr14 62 221 561608 561607 F 160 0.00 1082 reject_low 11 ALIGNMENT 0 YS2-9o22.q1k chr05 221 62 354727 354726 C 160 0.00 1082 reject_low 17 ALIGNMENT 509 YS2-9o22.q1k chr08 41 592 91206 91757 F 552 99.28 1082 reject_low 2 ALIGNMENT 308 YS2-9o22.q1k chr07 592 222 931174 931543 C 371 95.96 1082 reject_low 20 ALIGNMENT 0 YS2-9o22.q1k chr15 62 221 703773 703772 F 160 0.00 1082 reject_low 43 ALIGNMENT 0 YS2-9o22.q1k chr07 62 220 110858 110857 F 159 0.00 1082 reject_low 15 ALIGNMENT 71 YS2-9o22.p1k chr01 522 373 166015 166160 C 150 85.33 1049 ambiguous_trans 5 ALIGNMENT 0 YS2-9o22.q1k chr13 62 221 503770 503769 F 160 0.00 1082 reject_low 10 ALIGNMENT 0 YS2-9o22.q1k chr02 221 62 36219 36218 C 160 0.00 1082 reject_low 7 ALIGNMENT 312 YS2-9o22.q1k chr04 221 592 437145 437515 F 372 96.24 1082 reject_low 19 ALIGNMENT 0 YS2-9o22.q1k chr14 221 62 632492 632491 C 160 0.00 1082 reject_low 13 ALIGNMENT 0 YS2-9o22.q1k chr14 381 795 96609 96608 F 415 0.00 1082 reject_low 41 ALIGNMENT 0 YS2-9o22.q1k chr13 593 795 504140 504139 F 203 0.00 1082 reject_low 10 ALIGNMENT 0 YS2-9o22.p1k chr03 246 247 168593 168931 C 0 0.00 1049 ambiguous_trans_ua 44 ALIGNMENT 150 YS2-9o22.p1k chr02 369 178 197801 197997 C 192 93.23 1049 ambiguous_trans_ua 34 ALIGNMENT 355 YS2-9o22.q1k chr05 593 1082 432147 432642 F 490 92.65 1082 accept 0 ALIGNMENT 0 YS2-9o22.q1k chr13 220 62 808907 808906 C 159 0.00 1082 reject_low 18 ALIGNMENT 77 YS2-9o22.p1k chr03 522 373 168780 168925 C 150 86.67 1049 ambiguous_trans_ua 6 ALIGNMENT 340 YS2-9o22.q1k chr07 221 592 110858 111229 F 372 98.66 1082 reject_low 15 ALIGNMENT 521 YS2-9o22.q1k chr10 41 592 203138 203689 F 552 100.00 1082 reject_low 1 ALIGNMENT 46 YS2-9o22.q1k chr06 398 591 144325 144518 F 194 77.84 1082 reject_low 42 ALIGNMENT 0 YS2-9o22.q1k chr08 593 795 91757 91756 F 203 0.00 1082 reject_low 2 ALIGNMENT 355 YS2-9o22.q1k chr13 222 592 503770 504140 F 371 100.00 1082 reject_low 10 ALIGNMENT 71 YS2-9o22.p1k chr01 522 373 160427 160572 C 150 85.33 1049 ambiguous_trans 4 ALIGNMENT 0 YS2-9o22.q1k chr10 593 795 197834 197833 F 203 0.00 1082 reject_low 8 ALIGNMENT 0 YS2-9o22.q1k chr05 795 595 354355 354354 C 201 0.00 1082 reject_low 17 ALIGNMENT 0 YS2-9o22.q1k chr09 221 62 197021 197020 C 160 0.00 1082 reject_low 9 ALIGNMENT 327 YS2-9o22.q1k chr13 592 221 808536 808906 C 372 97.58 1082 reject_low 18 ALIGNMENT 0 YS2-9o22.q1k chr16 795 593 442740 442739 C 203 0.00 1082 reject_low 14 ALIGNMENT 156 YS2-9o22.p1k chr16 369 178 856625 856821 C 192 94.27 1049 ambiguous_trans_ua 30 ALIGNMENT 0 YS2-9o22.q1k chr06 592 795 144518 144517 F 204 0.00 1082 reject_low 42 ALIGNMENT 0 YS2-9o22.q1k chr10 593 795 203689 203688 F 203 0.00 1082 reject_low 1 ALIGNMENT 163 YS2-9o22.p1k chr07 369 178 707283 707478 C 192 95.31 1049 ambiguous_trans 23 ALIGNMENT 146 YS2-9o22.q1k chr14 221 380 96450 96609 F 160 98.12 1082 reject_low 41 ALIGNMENT 163 YS2-9o22.p1k chr11 178 369 202350 202545 F 192 95.31 1049 ambiguous_trans_ua 27 ALIGNMENT 357 YS2-9o22.q1k chr10 220 592 197462 197834 F 373 100.00 1082 reject_low 8 ALIGNMENT 160 YS2-9o22.p1k chr14 369 178 546823 547018 C 192 94.79 1049 ambiguous_trans_ua 28 ALIGNMENT 0 YS2-9o22.q1k chr15 511 510 704062 710027 F 0 0.00 1082 reject_low 43 ALIGNMENT 0 YS2-9o22.q1k chr09 795 593 196651 196650 C 203 0.00 1082 reject_low 9 ALIGNMENT 0 YS2-9o22.q1k chr02 795 597 35845 35844 C 199 0.00 1082 reject_low 7 ALIGNMENT 0 YS2-9o22.q1k chr02 795 593 643484 643483 C 203 0.00 1082 reject_low 16 ALIGNMENT 153 YS2-9o22.p1k chr08 178 369 146384 146580 F 192 93.75 1049 ambiguous_trans_ua 32 ALIGNMENT 150 YS2-9o22.p1k chr15 369 178 854357 854553 C 192 93.23 1049 ambiguous_trans_ua 36 ALIGNMENT 163 YS2-9o22.p1k chr09 369 178 205301 205496 C 192 95.31 1049 ambiguous_trans 25 ALIGNMENT 50 YS2-9o22.p1k chr03 249 178 168929 169003 C 72 90.28 1049|3,0 ambiguous_trans_ua 6,44 ALIGNMENT 0 YS2-9o22.q1k chr07 593 795 111229 111228 F 203 0.00 1082 reject_low 15 ALIGNMENT 150 YS2-9o22.p1k chr07 369 187 401703 401889 C 183 95.08 1049 ambiguous_trans_ua 37 ALIGNMENT 0 YS2-9o22.q1k chr07 795 593 931175 931174 C 203 0.00 1082 reject_low 20 ALIGNMENT 0 YS2-9o22.q1k chr04 593 795 437515 437514 F 203 0.00 1082 reject_low 19 ALIGNMENT 163 YS2-9o22.p1k chr09 369 178 210389 210584 C 192 95.31 1049 ambiguous_trans 26 ALIGNMENT 0 YS2-9o22.q1k chr05 62 592 432147 432146 F 531 0.00 1082 accept 0 ALIGNMENT 0 YS2-9o22.q1k chr14 595 795 561980 561979 F 201 0.00 1082 reject_low 11 ALIGNMENT 337 YS2-9o22.q1k chr14 595 222 632118 632491 C 374 98.13 1082 reject_low 13 ALIGNMENT 0 YS2-9o22.q1k chr14 795 596 632119 632118 C 200 0.00 1082 reject_low 13 ALIGNMENT 345 YS2-9o22.q1k chr14 222 594 561608 561980 F 373 98.93 1082 reject_low 11 ALIGNMENT 0 YS2-9o22.q1k chr10 62 219 197462 197461 F 158 0.00 1082 reject_low 8 ALIGNMENT 0 YS2-9o22.p1k chr03 372 250 168926 168928 C 123 0.00 1049 ambiguous_trans_ua 6 ALIGNMENT 0 YS2-9o22.q1k chr08 593 795 85905 85904 F 203 0.00 1082 reject_low 12 ALIGNMENT 153 YS2-9o22.p1k chr05 178 369 434687 434883 F 192 93.75 1049 ambiguous_trans_ua 31 ALIGNMENT 147 YS2-9o22.p1k chr04 369 178 668175 668371 C 192 92.71 1049 ambiguous_trans_ua 38 ALIGNMENT 333 YS2-9o22.q1k chr05 594 222 354354 354726 C 373 97.86 1082 reject_low 17 ALIGNMENT 60 YS2-9o22.q1k chr15 508 594 710025 710110 F 87 94.25 1082|3,0 reject_low 43 ALIGNMENT 163 YS2-9o22.p1k chr01 369 178 182698 182893 C 192 95.31 1049 ambiguous_trans_ua 22 ALIGNMENT 0 YS2-9o22.q1k chr14 62 220 96450 96449 F 159 0.00 1082 reject_low 41 ALIGNMENT 343 YS2-9o22.q1k chr16 592 222 442739 443109 C 371 98.92 1082 reject_low 14 ALIGNMENT 509 YS2-9o22.q1k chr16 592 41 436887 437438 C 552 99.28 1082 reject_low 3 ALIGNMENT 145 YS2-9o22.p1k chr12 369 178 374084 374279 C 192 92.71 1049 ambiguous_trans_ua 40 ALIGNMENT 0 YS2-9o22.q1k chr08 62 221 85535 85534 F 160 0.00 1082 reject_low 12 ALIGNMENT 147 YS2-9o22.p1k chr16 369 178 769401 769597 C 192 92.71 1049 ambiguous_trans_ua 39 ALIGNMENT 153 YS2-9o22.p1k chr14 369 178 726319 726515 C 192 93.75 1049 ambiguous_trans_ua 33 ALIGNMENT 0 YS2-9o22.q1k chr07 221 62 931544 931543 C 160 0.00 1082 reject_low 20 ALIGNMENT 107 YS2-9o22.p1k chr03 369 244 168468 168595 C 126 96.03 1049|0,3 ambiguous_trans_ua 44 ALIGNMENT 157 YS2-9o22.p1k chr05 178 370 492494 492691 F 193 94.30 1049 ambiguous_trans_ua 21 ALIGNMENT 0 YS2-9o22.q1k chr02 220 62 643855 643854 C 159 0.00 1082 reject_low 16 ALIGNMENT 0 YS2-9o22.q1k chr16 795 593 436888 436887 C 203 0.00 1082 reject_low 3 ALIGNMENT 163 YS2-9o22.p1k chr07 369 178 712294 712489 C 192 95.31 1049 ambiguous_trans 24 ALIGNMENT 0 YS2-9o22.q1k chr04 62 220 437145 437144 F 159 0.00 1082 reject_low 19 ALIGNMENT 355 YS2-9o22.q1k chr09 592 222 196650 197020 C 371 100.00 1082 reject_low 9 ALIGNMENT 156 YS2-9o22.p1k chr04 178 369 946009 946205 F 192 94.27 1049 ambiguous_trans_ua 29 ALIGNMENT 337 YS2-9o22.q1k chr02 592 221 643483 643854 C 372 98.39 1082 reject_low 16 ALIGNMENT 0 YS2-9o22.q1k chr06 62 397 144325 144324 F 336 0.00 1082 reject_low 42 ALIGNMENT 346 YS2-9o22.q1k chr08 222 592 85535 85905 F 371 99.19 1082 reject_low 12 ALIGNMENT 936 YS2-9p02.p1k chr02 1130 35 498133 499225 C 1096 96.35 1134 accept 0 ALIGNMENT 932 YS2-9p02.q1k chr02 38 1117 496089 497175 F 1080 96.76 1117 accept 0 ALIGNMENT 949 YS2-9p03.q1k chr02 1138 42 445021 446120 C 1097 96.63 1150 accept 0 ALIGNMENT 948 YS2-9p03.p1k chr02 30 1133 440112 441217 F 1104 96.38 1133 accept 0 ALIGNMENT 981 YS2-9p07.q1k chr02 1191 35 282871 284025 C 1157 95.94 1193 accept 0 ALIGNMENT 996 YS2-9p08.q1k chr04 45 1195 658754 659906 F 1151 96.26 1205 accept 0 ALIGNMENT 994 YS2-9p08.p1k chr04 1196 32 661772 662943 C 1165 96.39 1196 accept 0 ALIGNMENT 912 YS2-9p10.p1k chr12 1159 46 979761 980869 C 1114 95.96 1160 reject_low 11 ALIGNMENT 512 YS2-9p10.q1k chr12 693 1 597795 598475 C 693 94.08 893 reject_low 20 ALIGNMENT 575 YS2-9p10.q1k chr03 693 1 89501 90181 C 693 97.11 893 ambiguous_trans 7 ALIGNMENT 461 YS2-9p10.q1k chr10 693 1 477029 477709 C 693 91.63 893 reject_low 21 ALIGNMENT 575 YS2-9p10.q1k chr06 693 1 142599 143279 C 693 97.11 893 ambiguous_trans 8 ALIGNMENT 518 YS2-9p10.q1k chr12 639 1 655522 656156 C 639 95.62 893 reject_low 19 ALIGNMENT 518 YS2-9p10.q1k chr04 639 1 1211388 1212022 C 639 95.62 893 reject_low 18 ALIGNMENT 582 YS2-9p10.q1k chr15 1 693 704652 705332 F 693 97.40 893 ambiguous_trans 0 ALIGNMENT 918 YS2-9p10.p1k chr15 1159 46 708088 709196 C 1114 96.14 1160 ambiguous_trans 0 ALIGNMENT 572 YS2-9p10.q1k chr02 693 1 34332 35012 C 693 96.97 893 ambiguous_trans 5 ALIGNMENT 576 YS2-9p10.q1k chr04 1 693 514272 514952 F 693 97.11 893 ambiguous_trans 3 ALIGNMENT 0 YS2-9p10.q1k chr10 179 62 483115 483114 C 118 0.00 893 reject_low 26 ALIGNMENT 575 YS2-9p10.q1k chr07 693 1 816143 816823 C 693 97.11 893 ambiguous_trans 9 ALIGNMENT 900 YS2-9p10.p1k chr02 46 1159 30468 31576 F 1114 95.60 1160 ambiguous_trans 5 ALIGNMENT 561 YS2-9p10.q1k chr04 1 693 878887 879567 F 693 96.39 893 reject_low 14 ALIGNMENT 582 YS2-9p10.q1k chr04 693 1 876507 877187 C 693 97.40 893 ambiguous_trans 1 ALIGNMENT 549 YS2-9p10.q1k chr14 693 1 523794 524474 C 693 95.67 893 reject_low 15 ALIGNMENT 572 YS2-9p10.q1k chr14 1 693 562621 563301 F 693 96.97 893 ambiguous_trans 10 ALIGNMENT 900 YS2-9p10.p1k chr07 1159 46 572769 573877 C 1114 95.60 1160 ambiguous_trans 4 ALIGNMENT 582 YS2-9p10.q1k chr15 693 1 974973 975653 C 693 97.40 893 ambiguous_trans 2 ALIGNMENT 572 YS2-9p10.q1k chr12 693 1 945880 946560 C 693 96.97 893 ambiguous_trans 6 ALIGNMENT 894 YS2-9p10.p1k chr14 1159 46 566057 567165 C 1114 95.42 1160 ambiguous_trans 10 ALIGNMENT 513 YS2-9p10.q1k chr07 1 693 562436 563116 F 693 94.08 893 reject_low 16 ALIGNMENT 407 YS2-9p10.q1k chr13 693 1 200983 201663 C 693 89.03 893 reject_low 25 ALIGNMENT 217 YS2-9p10.q1k chr10 622 180 482675 483114 C 443 85.33 893 reject_low 26 ALIGNMENT 906 YS2-9p10.p1k chr04 46 1159 981992 983100 F 1114 95.78 1160 reject_low 12 ALIGNMENT 579 YS2-9p10.q1k chr04 1 693 646086 646766 F 693 97.26 893 reject_low 13 ALIGNMENT 575 YS2-9p10.q1k chr07 1 693 569332 570012 F 693 97.11 893 ambiguous_trans 4 ALIGNMENT 443 YS2-9p10.q1k chr13 693 1 188816 189496 C 693 90.76 893 reject_low 22 ALIGNMENT 513 YS2-9p10.q1k chr16 1 693 805230 805910 F 693 94.08 893 reject_low 17 ALIGNMENT 443 YS2-9p10.q1k chr16 693 1 849063 849743 C 693 90.76 893 reject_low 23 ALIGNMENT 438 YS2-9p10.q1k chr16 1 693 851218 851898 F 693 90.48 893 reject_low 24 ALIGNMENT 912 YS2-9p10.p1k chr15 46 1159 971109 972217 F 1114 95.96 1160 ambiguous_trans 2 ALIGNMENT 900 YS2-9p10.p1k chr04 1159 46 517708 518816 C 1114 95.60 1160 ambiguous_trans 3 ALIGNMENT 900 YS2-9p10.p1k chr12 46 1159 942016 943124 F 1114 95.60 1160 ambiguous_trans 6 ALIGNMENT 897 YS2-9p10.p1k chr07 46 1159 812279 813387 F 1114 95.51 1160 ambiguous_trans 9 ALIGNMENT 897 YS2-9p10.p1k chr06 46 1159 138735 139843 F 1114 95.51 1160 ambiguous_trans 8 ALIGNMENT 897 YS2-9p10.p1k chr03 46 1159 85637 86745 F 1114 95.51 1160 ambiguous_trans 7 ALIGNMENT 912 YS2-9p10.p1k chr04 46 1159 872643 873751 F 1114 95.96 1160 ambiguous_trans 1 ALIGNMENT 1004 YS2-9p13.q1k chr13 39 1187 557143 558276 F 1149 97.04 1187 accept 0 ALIGNMENT 962 YS2-9p13.p1k chr13 1178 37 562050 563192 C 1142 95.71 1178 accept 0 ALIGNMENT 0 YS2-9p14.q1k vc_5 218 62 5064 5063 C 157 0.00 257 reject_low 5 ALIGNMENT 41 YS2-9p14.q1k vc_2 257 217 2105 2145 C 41 100.00 257 reject_low 2 ALIGNMENT 0 YS2-9p14.q1k vc_7 62 219 13525 13524 F 158 0.00 257 reject_low 6 ALIGNMENT 41 YS2-9p14.q1k vc_3 257 217 2472 2512 C 41 100.00 257 reject_low 3 ALIGNMENT 178 YS2-9p14.q1k chr12 227 37 689145 689335 C 191 97.91 257 accept 0 ALIGNMENT 0 YS2-9p14.q1k vc_1 216 62 2513 2512 C 155 0.00 257 reject_low 1 ALIGNMENT 0 YS2-9p14.q1k vc_2 216 62 2146 2145 C 155 0.00 257 reject_low 2 ALIGNMENT 39 YS2-9p14.q1k vc_5 257 219 5025 5063 C 39 100.00 257 reject_low 5 ALIGNMENT 0 YS2-9p14.q1k vc_5 218 62 37 36 C 157 0.00 257 reject_low 7 ALIGNMENT 0 YS2-9p14.q1k vc_3 216 62 2513 2512 C 155 0.00 257 reject_low 3 ALIGNMENT 36 YS2-9p14.q1k vc_5 254 219 1 36 C 36 100.00 257 reject_low 7 ALIGNMENT 38 YS2-9p14.q1k vc_7 220 257 13525 13562 F 38 100.00 257 reject_low 6 ALIGNMENT 41 YS2-9p14.q1k vc_1 257 217 2472 2512 C 41 100.00 257 reject_low 1 ALIGNMENT 0 YS2-9p14.q1k vc_4 62 216 5831 5830 F 155 0.00 257 reject_low 4 ALIGNMENT 41 YS2-9p14.q1k vc_4 217 257 5831 5871 F 41 100.00 257 reject_low 4 ALIGNMENT 0 YS2-9p14.q1k chr12 257 228 689146 689145 C 30 0.00 257 accept 0 ALIGNMENT 968 YS2-9p15.p1k chr04 23 1130 888553 889652 F 1108 96.66 1142 accept 0 ALIGNMENT 886 YS2-9p15.q1k chr04 1021 32 889290 890273 C 990 97.58 1189 accept 0 ALIGNMENT 38 YS2-9p16.q1k vc_7 337 374 13525 13562 F 38 100.00 374 reject_low 7 ALIGNMENT 40 YS2-9p16.q1k vc_4 335 374 5832 5871 F 40 100.00 374 reject_low 5 ALIGNMENT 40 YS2-9p16.q1k vc_3 374 335 2472 2511 C 40 100.00 374 reject_low 4 ALIGNMENT 278 YS2-9p16.p1k chr08 323 35 334600 334888 C 289 99.31 342 accept_chi 1 ALIGNMENT 0 YS2-9p16.q1k vc_3 334 62 2512 2511 C 273 0.00 374 reject_low 4 ALIGNMENT 39 YS2-9p16.q1k vc_5 374 336 5025 5063 C 39 100.00 374 reject_low 6 ALIGNMENT 0 YS2-9p16.q1k vc_5 335 62 37 36 C 274 0.00 374 reject_low 8 ALIGNMENT 36 YS2-9p16.q1k vc_5 371 336 1 36 C 36 100.00 374 reject_low 8 ALIGNMENT 0 YS2-9p16.q1k vc_7 62 336 13525 13524 F 275 0.00 374 reject_low 7 ALIGNMENT 282 YS2-9p16.q1k chr08 42 334 334600 334892 F 293 99.32 374 accept_chi 0 ALIGNMENT 0 YS2-9p16.q1k vc_1 334 62 2512 2511 C 273 0.00 374 reject_low 2 ALIGNMENT 0 YS2-9p16.p1k chr08 342 324 334601 334600 C 19 0.00 342 accept_chi 1 ALIGNMENT 0 YS2-9p16.q1k vc_2 334 62 2145 2144 C 273 0.00 374 reject_low 3 ALIGNMENT 0 YS2-9p16.q1k chr08 335 374 334892 334891 F 40 0.00 374 accept_chi 0 ALIGNMENT 0 YS2-9p16.q1k vc_5 335 62 5064 5063 C 274 0.00 374 reject_low 6 ALIGNMENT 40 YS2-9p16.q1k vc_1 374 335 2472 2511 C 40 100.00 374 reject_low 2 ALIGNMENT 0 YS2-9p16.q1k vc_4 62 334 5832 5831 F 273 0.00 374 reject_low 5 ALIGNMENT 40 YS2-9p16.q1k vc_2 374 335 2105 2144 C 40 100.00 374 reject_low 3 ALIGNMENT 907 YS2-9p17.q1k chr13 42 1072 782856 783868 F 1031 97.77 1143 accept 0 ALIGNMENT 939 YS2-9p17.p1k chr13 1106 37 785906 786972 C 1070 96.92 1113 accept 0 ALIGNMENT 989 YS2-9p18.p1k chr04 36 1112 1244073 1245148 F 1077 97.59 1112 reject_low 1 ALIGNMENT 935 YS2-9p18.q1k chr15 1072 37 579392 580428 C 1036 97.68 1112 accept 0 ALIGNMENT 986 YS2-9p18.p1k chr15 36 1112 575951 577026 F 1077 97.49 1112 accept 0 ALIGNMENT 900 YS2-9p19.q1k chr13 48 1152 873400 874499 F 1105 94.21 1161 accept 0 ALIGNMENT 0 YS2-9p19.q1k chr13 227 62 435626 435625 C 166 0.00 1161 reject_low 3 ALIGNMENT 941 YS2-9p19.p1k chr13 1122 42 877519 878597 C 1081 96.76 1142 accept 0 ALIGNMENT 88 YS2-9p19.q1k chr13 595 228 435258 435625 C 368 75.27 1161 reject_low 3 ALIGNMENT 113 YS2-9p19.q1k chr02 981 374 533771 534376 C 608 73.52 1161 reject_low 2 ALIGNMENT 575 YS2-9p19.q1k chr15 49 994 159658 160600 F 946 87.10 1161 reject_low 1 ALIGNMENT 0 YS2-9p19.q1k chr02 373 62 534377 534376 C 312 0.00 1161 reject_low 2 ALIGNMENT 0 YS2-9p19.q1k chr13 845 596 435259 435258 C 250 0.00 1161 reject_low 3 ALIGNMENT 206 YS2-9p20.p1k chr12 22 319 394008 394302 F 298 92.28 337 accept_chi 1 ALIGNMENT 0 YS2-9p20.q1k chr12 373 338 394009 394008 C 36 0.00 373 accept_chi 0 ALIGNMENT 40 YS2-9p20.q1k vc_3 373 334 2472 2511 C 40 100.00 373 reject_low 4 ALIGNMENT 40 YS2-9p20.q1k vc_1 373 334 2472 2511 C 40 100.00 373 reject_low 2 ALIGNMENT 38 YS2-9p20.q1k vc_7 336 373 13525 13562 F 38 100.00 373 reject_low 7 ALIGNMENT 40 YS2-9p20.q1k vc_4 334 373 5832 5871 F 40 100.00 373 reject_low 5 ALIGNMENT 0 YS2-9p20.p1k chr12 320 337 394302 394301 F 18 0.00 337 accept_chi 1 ALIGNMENT 0 YS2-9p20.q1k vc_2 333 62 2145 2144 C 272 0.00 373 reject_low 3 ALIGNMENT 0 YS2-9p20.q1k vc_5 334 62 5064 5063 C 273 0.00 373 reject_low 6 ALIGNMENT 211 YS2-9p20.q1k chr12 337 39 394008 394302 C 299 92.64 373 accept_chi 0 ALIGNMENT 0 YS2-9p20.q1k vc_3 333 62 2512 2511 C 272 0.00 373 reject_low 4 ALIGNMENT 0 YS2-9p20.q1k vc_1 333 62 2512 2511 C 272 0.00 373 reject_low 2 ALIGNMENT 39 YS2-9p20.q1k vc_5 373 335 5025 5063 C 39 100.00 373 reject_low 6 ALIGNMENT 0 YS2-9p20.q1k vc_4 62 333 5832 5831 F 272 0.00 373 reject_low 5 ALIGNMENT 36 YS2-9p20.q1k vc_5 370 335 1 36 C 36 100.00 373 reject_low 8 ALIGNMENT 0 YS2-9p20.q1k vc_5 334 62 37 36 C 273 0.00 373 reject_low 8 ALIGNMENT 40 YS2-9p20.q1k vc_2 373 334 2105 2144 C 40 100.00 373 reject_low 3 ALIGNMENT 0 YS2-9p20.q1k vc_7 62 335 13525 13524 F 274 0.00 373 reject_low 7 ALIGNMENT 175 YS2-9p21.p1k vc_4 854 1072 5871 6089 F 219 93.15 1073 reject_low 5 ALIGNMENT 0 YS2-9p21.p1k vc_5 62 830 2375 2374 F 769 0.00 1073 reject_low 9 ALIGNMENT 0 YS2-9p21.p1k vc_3 853 62 2106 2105 C 792 0.00 1073 reject_low 4 ALIGNMENT 175 YS2-9p21.p1k vc_1 1072 854 1887 2105 C 219 93.15 1073 reject_low 2 ALIGNMENT 26 YS2-9p21.p1k vc_1 884 854 2441 2472 C 31 96.77 1073 reject_low 12 ALIGNMENT 799 YS2-9p21.q1k chr15 851 41 759803 760613 C 811 99.88 1160 accept_chi 0 ALIGNMENT 0 YS2-9p21.p1k vc_7 62 853 13562 13561 F 792 0.00 1073 reject_low 8 ALIGNMENT 0 YS2-9p21.p1k vc_5 853 62 5026 5025 C 792 0.00 1073 reject_low 6 ALIGNMENT 20 YS2-9p21.p1k vc_5 831 854 2375 2398 F 24 91.67 1073 reject_low 9 ALIGNMENT 175 YS2-9p21.p1k vc_2 1072 854 1887 2105 C 219 93.15 1073 reject_low 3 ALIGNMENT 0 YS2-9p21.q1k vc_5 852 62 37 36 C 791 0.00 1160 reject_low 11 ALIGNMENT 175 YS2-9p21.p1k vc_7 854 1072 13562 13780 F 219 93.15 1073 reject_low 8 ALIGNMENT 0 YS2-9p21.p1k vc_7 62 853 100 99 F 792 0.00 1073 reject_low 7 ALIGNMENT 175 YS2-9p21.p1k vc_7 854 1072 100 318 F 219 93.15 1073 reject_low 7 ALIGNMENT 26 YS2-9p21.p1k vc_3 884 854 2441 2472 C 31 96.77 1073 reject_low 13 ALIGNMENT 0 YS2-9p21.q1k vc_5 852 62 5064 5063 C 791 0.00 1160 reject_low 9 ALIGNMENT 175 YS2-9p21.p1k vc_3 1072 854 1887 2105 C 219 93.15 1073 reject_low 4 ALIGNMENT 175 YS2-9p21.p1k vc_5 1072 854 4807 5025 C 219 93.15 1073 reject_low 6 ALIGNMENT 34 YS2-9p21.q1k vc_4 851 889 5831 5868 F 39 97.44 1160 reject_low 10 ALIGNMENT 32 YS2-9p21.q1k vc_5 889 853 1 36 C 37 97.30 1160 reject_low 11 ALIGNMENT 32 YS2-9p21.q1k vc_5 889 853 5028 5063 C 37 97.30 1160 reject_low 9 ALIGNMENT 0 YS2-9p21.p1k vc_1 853 62 2473 2472 C 792 0.00 1073 reject_low 12 ALIGNMENT 0 YS2-9p21.p1k vc_3 853 62 2473 2472 C 792 0.00 1073 reject_low 13 ALIGNMENT 0 YS2-9p21.p1k vc_2 853 62 2106 2105 C 792 0.00 1073 reject_low 3 ALIGNMENT 0 YS2-9p21.p1k vc_4 62 853 5871 5870 F 792 0.00 1073 reject_low 5 ALIGNMENT 790 YS2-9p21.p1k chr15 26 836 759803 760613 F 811 99.51 1073 accept_chi 1 ALIGNMENT 0 YS2-9p21.q1k vc_4 62 850 5831 5830 F 789 0.00 1160 reject_low 10 ALIGNMENT 0 YS2-9p21.p1k vc_1 853 62 2106 2105 C 792 0.00 1073 reject_low 2 ALIGNMENT 924 YS2-9p22.q1k chr16 29 1071 670487 671523 F 1043 98.18 1075 accept 0 ALIGNMENT 974 YS2-9p22.p1k chr16 1074 27 673879 674927 C 1048 98.38 1074 accept 0 ALIGNMENT 927 YS2-9p23.p1k chr12 46 1027 871612 872594 F 982 98.37 1086 accept 0 ALIGNMENT 931 YS2-9p23.q1k chr12 1023 42 871613 872594 C 982 98.47 1072 accept 0