##FastQC	0.10.0
>>Basic Statistics	pass
#Measure	Value	
Filename	8016-8-55.h.sapiens.aligned.bam	
File type	Conventional base calls	
Encoding	Sanger / Illumina 1.9	
Total Sequences	12306976	
Filtered Sequences	0	
Sequence length	1-100	
%GC	43	
>>END_MODULE
>>Per base sequence quality	warn
#Base	Mean	Median	Lower Quartile	Upper Quartile	10th Percentile	90th Percentile
1	25.993728597504376	24.0	24.0	31.0	23.0	31.0
2	31.02943407765932	31.0	31.0	32.0	29.0	33.0
3	32.6914667814643	33.0	33.0	34.0	29.0	35.0
4	33.89702895899479	34.0	33.0	36.0	29.0	37.0
5	35.44510651837967	36.0	35.0	37.0	33.0	37.0
6	35.758539363763	36.0	36.0	38.0	33.0	38.0
7	35.77805391106506	37.0	35.0	37.0	34.0	37.0
8	35.625181634563496	36.0	36.0	37.0	32.0	38.0
9	35.65220876291405	37.0	36.0	37.0	31.0	38.0
10-14	36.02057486233395	37.0	36.0	37.4	32.4	38.0
15-19	37.01563804778333	38.0	37.2	38.4	33.4	39.4
20-24	36.65235242450601	37.4	36.0	38.8	32.8	39.8
25-29	36.31161671794221	37.6	36.2	38.0	32.8	38.2
30-34	36.17396414506909	37.6	35.6	38.2	32.6	38.6
35-39	36.21213865676939	37.8	36.4	38.0	31.6	38.6
40-44	36.13441242262942	37.4	36.0	38.4	32.4	38.8
45-49	36.0800127259726	37.6	35.8	38.2	32.4	38.6
50-54	36.315973482440164	37.6	36.2	38.4	33.4	39.0
55-59	36.02830400446739	37.6	35.8	38.2	32.4	38.6
60-64	36.03352470767411	37.6	35.6	38.2	32.6	38.6
65-69	35.847799343977286	37.4	36.0	38.2	31.6	38.6
70-74	35.90578666242743	37.4	36.0	38.4	32.0	39.0
75-79	35.62287314643692	37.4	35.6	37.6	32.2	38.4
80-84	35.73625319723484	37.2	35.8	38.2	31.6	38.6
85-89	35.45007347139942	37.2	35.4	37.6	31.0	38.2
90-94	35.44379654904189	37.0	35.0	38.2	32.8	38.4
95-99	35.292552830782874	37.4	35.2	37.6	31.2	38.2
100	34.20978645515984	36.0	33.0	38.0	28.0	38.0
>>END_MODULE
>>Per sequence quality scores	pass
#Quality	Count
1	1.0
2	11.0
3	44.0
4	0.0
5	7.0
6	84.0
7	249.0
8	394.0
9	5066.0
10	972.0
11	1266.0
12	1932.0
13	2924.0
14	4353.0
15	5417.0
16	6746.0
17	8241.0
18	10680.0
19	14008.0
20	18057.0
21	20440.0
22	22096.0
23	25140.0
24	31417.0
25	41184.0
26	55748.0
27	76722.0
28	105278.0
29	140141.0
30	182197.0
31	238675.0
32	311977.0
33	426738.0
34	635893.0
35	1154685.0
36	3576163.0
37	5182014.0
38	16.0
>>END_MODULE
>>Per base sequence content	fail
#Base	G	A	T	C
1	19.610164053487054	19.30050257468372	22.798615937216997	38.290717434612226
2	17.72351702665572	51.69133343630348	15.716664092412996	14.868485444627805
3	19.745685027030994	35.450576325503135	29.41199996195737	15.3917386855085
4	32.86601108394217	25.369136180731356	21.48201735128852	20.282835384037956
5	21.243327144277096	27.52173418884204	26.543482279890274	24.69145638699059
6	21.644954137988005	29.153102434049373	26.279596315428655	22.92234711253397
7	21.990027292168985	27.757557140285456	27.303796169469358	22.948619398076197
8	21.30586000244741	27.209200310764174	28.531045723069443	22.953893963718976
9	21.460122359184204	29.259884106535083	27.291279109051203	21.98871442522951
10-14	21.953611310565805	27.463013391744205	27.461938466739333	23.12143683095066
15-19	21.209767565588074	27.714834240365562	28.117512145291496	22.957886048754876
20-24	21.436451942313568	27.021208596328293	28.280735480122924	23.26160398123522
25-29	21.448879306920183	27.48946938600073	28.832108017919627	22.22954328915946
30-34	21.805905021445053	28.104904195939522	27.899789090673522	22.189401691941907
35-39	21.931926072489468	27.304201459423	28.818050712386285	21.94582175570125
40-44	21.653384151549464	28.01495579188285	28.173441763557626	22.15821829301006
45-49	21.927452711332123	28.545790045175423	28.17814673693484	21.348610506557613
50-54	21.89347201411234	28.03596628595416	28.171386427355134	21.899175272578365
55-59	21.81793399567033	28.639175507158033	27.88291888069811	21.659971616473527
60-64	21.790805342893552	28.211198628426782	28.7412891551639	21.256706873515764
65-69	21.83660822249093	28.73162629389957	28.478523592489736	20.953241891119763
70-74	21.691802237783904	28.52584728974167	28.049372652425962	21.732977820048465
75-79	21.946276711389466	28.572750492208037	28.021795029347444	21.459177767055053
80-84	21.409044441592087	28.601886276518062	28.36081551709666	21.62825376479319
85-89	21.78899025787227	28.569630193219798	27.986550630899128	21.654828918008803
90-94	21.659156866934488	28.179062040950996	28.307299957825805	21.85448113428871
95-99	21.615469705488486	27.67126481409361	28.53398649166413	22.17927898875377
100	22.237695677342565	27.39825162475646	27.665708040269294	22.698344657631683
>>END_MODULE
>>Per base GC content	fail
#Base	%GC
1	57.90088148809927
2	32.59200247128352
3	35.137423712539494
4	53.14884646798013
5	45.93478353126768
6	44.56730125052197
7	44.93864669024518
8	44.25975396616638
9	43.448836784413714
10-14	45.07504814151646
15-19	44.16765361434295
20-24	44.698055923548786
25-29	43.67842259607964
30-34	43.99530671338696
35-39	43.877747828190714
40-44	43.81160244455952
45-49	43.276063217889735
50-54	43.79264728669071
55-59	43.47790561214386
60-64	43.04751221640932
65-69	42.7898501136107
70-74	43.424780057832365
75-79	43.40545447844452
80-84	43.03729820638528
85-89	43.443819175881075
90-94	43.51363800122321
95-99	43.79474869424225
100	44.93604033497425
>>END_MODULE
>>Per sequence GC content	warn
#GC Content	Count
0	4677.0
1	4677.5
2	4676.5
3	4675.5
4	4684.0
5	4700.0
6	4716.5
7	4744.0
8	4773.5
9	4808.0
10	4864.5
11	4921.0
12	4978.0
13	5092.5
14	5201.0
15	5785.5
16	6042.0
17	6108.0
18	7277.0
19	8354.5
20	11285.0
21	14422.0
22	21900.0
23	31061.0
24	49746.0
25	79086.5
26	109815.5
27	138553.5
28	155760.0
29	198299.5
30	257387.0
31	281183.5
32	301029.5
33	344826.5
34	402653.0
35	421647.0
36	390842.5
37	377277.0
38	430649.5
39	480286.0
40	509168.0
41	513375.0
42	478804.0
43	490239.5
44	521081.5
45	495090.0
46	429408.0
47	367276.0
48	353579.0
49	380469.0
50	405373.5
51	409287.0
52	334361.0
53	246450.5
54	225627.5
55	205769.5
56	162364.0
57	138764.5
58	165152.0
59	171672.0
60	151121.5
61	152048.5
62	138825.5
63	116700.5
64	91296.0
65	84320.5
66	102948.5
67	95326.5
68	60496.0
69	43953.0
70	38318.0
71	34311.5
72	31463.0
73	19948.0
74	12708.5
75	15040.5
76	14987.5
77	13059.5
78	10899.0
79	10237.5
80	8627.5
81	8122.5
82	6557.0
83	4805.5
84	5012.5
85	4057.0
86	3678.5
87	2753.0
88	2491.5
89	2653.0
90	2730.0
91	2851.0
92	2476.5
93	2150.5
94	2125.5
95	2105.0
96	2087.5
97	2081.5
98	2071.5
99	2068.0
100	2066.5
>>END_MODULE
>>Per base N content	pass
#Base	N-Count
1	0.055399474249401316
2	0.00789285165316225
3	0.0019427375268935025
4	0.0073158128286679724
5	0.00434933147523389
6	7.723829045158301E-4
7	3.658890278092736E-4
8	1.463565393280755E-4
9	6.504743543574504E-5
10-14	0.00137087648524832
15-19	0.017833036883081774
20-24	0.015983002479488317
25-29	0.00840847988277293
30-34	0.007837380844698675
35-39	0.005518224923206197
40-44	0.012818584337634964
45-49	0.011663647392980902
50-54	0.010478006732437681
55-59	0.011111086128035458
60-64	0.05422915403428981
65-69	0.04395830480825026
70-74	0.027669514463609074
75-79	0.07488567530960182
80-84	0.0642398471405481
85-89	0.01526886425284561
90-94	0.007564534917264217
95-99	0.009410260328548631
100	0.008270263477320046
>>END_MODULE
>>Sequence Length Distribution	warn
#Length	Count
0-1	4705.0
2-3	152.0
4-5	2520.0
6-7	866.0
8-9	18.0
10-11	16.0
12-13	6.0
14-15	25.0
16-17	159.0
18-19	612.0
20-21	4514.0
22-23	1408.0
24-25	6317.0
26-27	975.0
28-29	919.0
30-31	2001.0
32-33	960.0
34-35	1132.0
36-37	655.0
38-39	625.0
40-41	972.0
42-43	807.0
44-45	1294.0
46-47	2848.0
48-49	871.0
50-51	27751.0
52-53	2242.0
54-55	32125.0
56-57	37599.0
58-59	65578.0
60-61	3427.0
62-63	29300.0
64-65	19532.0
66-67	17282.0
68-69	20305.0
70-71	49049.0
72-73	46448.0
74-75	21889.0
76-77	27435.0
78-79	10760.0
80-81	21394.0
82-83	27689.0
84-85	11444.0
86-87	5540.0
88-89	7991.0
90-91	31014.0
92-93	7427.0
94-95	11523.0
96-97	286192.0
98-99	0.0
100-101	1.1450663E7
>>END_MODULE
>>Sequence Duplication Levels	fail
#Total Duplicate Percentage	97.32674091309656
#Duplication Level	Relative count
1	100.0
2	8.106346295608098
3	2.6629219643847133
4	1.5072223609901123
5	1.2233235654277064
6	1.0149686553797603
7	0.9046989515239761
8	0.7627495537427731
9	0.6457783761719964
10++	5.016966912996595
>>END_MODULE
>>Overrepresented sequences	warn
#Sequence	Count	Percentage	Possible Source
CATGCATCTAAATCTTCTCTGGAGATTATCTCCCTACTGTGTAGGTTAAG	13293	0.10801191129323727	No Hit
CTTGGGGGAGTGTGCCTCCAGCAGAGAAGTAATTCTGGCCTGGCAACCTA	13225	0.1074593791358657	No Hit
GATGGCACACACACACAACACAGGGAGCTGGAGCCTCAGTTTCACGCTGA	13122	0.10662245542690585	No Hit
CATGTAGACTTACCTTTCCTCATAGAGCTATCCTGGTTAATAACAGGCCA	12732	0.10345352099492192	No Hit
ACACTTACACCAAGGAATCTCCCAGGCATTATCAAAGCTACAGGAGACAA	12674	0.10298224356657558	No Hit
>>END_MODULE
>>Kmer Content	warn
#Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
AAAAA	6528555	3.1129637	6.047213	2
TTTTT	6075950	3.0730708	4.2387924	75-79
GGGGG	1482365	2.6290154	7.1054316	4
CCCCA	1968995	2.5378308	6.250884	1
CCAGC	1874605	2.450523	5.2493744	5
CCTCC	1870075	2.4389186	5.9475155	6
TGGGG	1707090	2.355692	9.241428	3
CTGCC	1770815	2.3422995	5.156597	7
GAGGG	1533480	2.0913172	5.129274	8
TGGCT	1825260	1.932324	5.291963	3
TGCAG	1792320	1.8752124	7.3820763	3
GCCCA	1384060	1.8092722	5.9888515	2
GGCTC	1311740	1.759738	7.252563	1
TGCCC	1180735	1.5617867	8.131325	3
GCTCC	1171730	1.5498754	6.486392	2
GGCCC	899405	1.5289755	6.634688	1
CATGG	1441390	1.5080523	38.332424	1
TAAAA	3069500	1.4809653	7.8966537	1
ATGGA	1785415	1.4568298	10.120607	2
GCAGT	1315500	1.3763402	5.4161787	4
ATGTG	1583490	1.3073903	8.856091	2
TGGGT	1211820	1.3011407	5.5415783	3
ATGGC	1223220	1.2797923	9.633906	2
ATGAA	1985975	1.2460837	7.8146315	2
ATGGG	1173360	1.2450798	12.336829	2
ATGCC	1154980	1.1914572	7.8162017	2
CATGT	1340625	1.0913557	29.025532	1
ATGCT	1306095	1.063246	7.791496	2
CATGA	1320245	1.062168	24.363287	1
ATGTT	1625490	1.0442351	6.686327	2
ATGGT	1259205	1.0396482	6.470949	2
TAAAG	1608845	1.0094566	5.4037213	1
CATGC	940135	0.9698269	29.70644	1
ATGAT	1517840	0.9636509	5.0574293	2
ATGAC	1189195	0.95673525	5.831439	2
ATGTA	1434530	0.91075873	6.545614	2
ATGCA	1040880	0.8374125	9.906194	2
TAAGA	1303060	0.81759435	5.011645	1
TAATG	1208700	0.7673831	5.3097763	1
TAAGT	1171185	0.7435655	6.9323664	1
TAAAC	1100775	0.6809905	5.2067094	1
TAAGG	828045	0.6756528	5.999074	1
TGCCG	385105	0.51662976	7.5480857	5
>>END_MODULE